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Queries

Nucleotide Sequence (355 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 4 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
36
72
108
144
180
216
252
288
324
355

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
198.4 198.4 32% 4.698e-56 79% ADO60926

Alignments

putative RNA-dependent RNA polymerase, partial [Grapevine associated chrysovirus-1]

Sequence ID: gb|ADO60926.1| Length: 957 Number of Matches: 1

Range 1: 325 to 436 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
198.4 bits(503) 0.0 88/112(79%) 0/112(0%) Plus/Plus
Query       20  KPWMGVNFSAWSDLMKSLHSYVRCSRFLMNTEISEQDRQALMYLDLNVGRGEYQIDEMAEVTVRSAETYSSKHLSYDSDLKLFTNEQYVTDFSRGIQLAHMRIKHNPKPAQI  355
                K WMGVNF  WSD+MKSLHSY+RCSRFLMNTEI+EQDRQ+LMY+DL VGRGEYQIDEMAEV++R ++TYSSKHLSY+ DLK FTNEQY+ DFSR +Q+AHMRIKHNPKP Q 
Subject    325  KKWMGVNFHHWSDVMKSLHSYIRCSRFLMNTEITEQDRQSLMYMDLLVGRGEYQIDEMAEVSLRQSDTYSSKHLSYNPDLKAFTNEQYIKDFSRSVQIAHMRIKHNPKPLQF  436

Nucleotide Sequence (395 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 4 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
40
80
120
160
200
240
280
320
360
395

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
242.7 242.7 33% 1.01e-71 83% ADO60926

Alignments

putative RNA-dependent RNA polymerase, partial [Grapevine associated chrysovirus-1]

Sequence ID: gb|ADO60926.1| Length: 957 Number of Matches: 1

Range 1: 610 to 740 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
242.7 bits(618) 0.0 109/131(83%) 0/131(0%) Minus/Plus
Query        1  DYSMFCSAIIEGMFRMGLEDREGMVHKLWRGLYSGWRGTTWINTVLNFVYVAIALMNLERITGKSVVLMVDHGGDDLDLCLSQPEMMPQFMEIMDNMLFKANKWKQMFGIRSEFFRNTISGARVYASPTRA  393
                DY +FCSAI+EGM+ MGL+D+EG +HKLWRGLYSGWRGTTWINTVLNF YV+IAL+N+ER+TG SVVLMVDHGGDDLDL LS+P +MP F+EIMDNMLFKANKWKQMFG RSEFFRNTISGARVYASPTRA
Subject    610  DYHLFCSAIVEGMYEMGLQDKEGHLHKLWRGLYSGWRGTTWINTVLNFCYVSIALLNMERLTGVSVVLMVDHGGDDLDLVLSEPSVMPTFLEIMDNMLFKANKWKQMFGKRSEFFRNTISGARVYASPTRA  740

Nucleotide Sequence (333 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 4 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
34
68
102
136
170
204
238
272
306
333

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
216.5 216.5 33% 8.125e-63 87% ADO60926

Alignments

putative RNA-dependent RNA polymerase, partial [Grapevine associated chrysovirus-1]

Sequence ID: gb|ADO60926.1| Length: 957 Number of Matches: 1

Range 1: 529 to 638 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
216.5 bits(550) 0.0 96/110(87%) 0/110(0%) Plus/Plus
Query        3  PGSLAHFVVFCYILMLAERQEQIGSVRLNAMGDGDIRYFDRKMSTGMFHVLYDWADFNEQHSAWEMAQVIKELENVMPDTPDYSMFCSAIIEGMFRMGLEDREGMVHKLW  332
                PGSLAHF+VFCYILMLAE+QEQIGSVRLNAMGDGDIRYFD+KMSTG FHVLYDWADFNEQHSAWEMAQVIKELE VMPDTPDY +FCSAI+EGM+ MGL+D+EG +HKLW
Subject    529  PGSLAHFIVFCYILMLAEKQEQIGSVRLNAMGDGDIRYFDKKMSTGTFHVLYDWADFNEQHSAWEMAQVIKELETVMPDTPDYHLFCSAIVEGMYEMGLQDKEGHLHKLW  638

Nucleotide Sequence (309 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 4 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
31
62
93
124
155
186
217
248
279
309

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
162.5 162.5 33% 2.221e-43 74% ADO60926

Alignments

putative RNA-dependent RNA polymerase, partial [Grapevine associated chrysovirus-1]

Sequence ID: gb|ADO60926.1| Length: 957 Number of Matches: 1

Range 1: 416 to 517 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
162.5 bits(410) 0.0 75/102(74%) 0/102(0%) Plus/Plus
Query        2  FSRGIQLAHMRIKHNAKPVNVASCGEFYRKRLGWITIGGLVYNKLPKGMKVFSAEVFDAVASTVEEIQGRHNKKSLFEMNDLYEILVGVNRDNFNLTKTMIK  307
                FSR +Q+AHMRIKHN KP+   +  +FYR R  WIT GGLV N LPKGMK FSA++FDAVA+TVEEI+GRHNKKSLFEMN+LY+ILVGVNR NFN+TKTMIK
Subject    416  FSRSVQIAHMRIKHNPKPLQFTTFTDFYRARHTWITKGGLVSNTLPKGMKQFSAQIFDAVAATVEEIEGRHNKKSLFEMNELYDILVGVNRHNFNVTKTMIK  517