Queries
Nucleotide Sequence (312 letters)
Query ID: | ds2016-55_22 |
Query definition: | No definition line |
Query length: | 575 |
Program: | TBLASTX 2.2.29+ |
Database: | /save/stheil/db/refseq_vir/viral.genomic.fna |
Graphic Summary
Descriptions
Alignments
Isaria javanica chrysovirus 1 isolate IjCV-1 RNA-dependent RNA polymerase (RdRp) gene, complete cds
Range 1: 1411 to 1719 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
154.6 bits(331) | 0.0 | 62/103(60%) | 0/103(0%) | Minus/Plus |
Query 1 VNFSAWSDLMKSLHSYVRCSRFLMNTEISEQDRQALMYLDLNVGRGEYQIDEMAEVTVRSAETYSSKHLSYDSDLKLFTNEQYVTDFSRGIQLAHMRIKHNPK 309 V+F WSD +KSLHS VRCSRFLMNTEI+E++RQ LMY+DL VGRGEY+IDEM EV R + Y +KHLSYD K +TN+QY DF + AH+R+K P+ Subject 1411 VSFRNWSDRLKSLHSLVRCSRFLMNTEITEEERQGLMYMDLLVGRGEYKIDEMNEVRARYGDGYGTKHLSYDPVTKAYTNKQYKKDFELALDAAHLRLKVTPR 1719
Range 2: 1410 to 1715 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.5 bits(226) | 0.0 | 55/102(54%) | 0/102(0%) | Plus/Minus |
Query 5 GLCLMRMWASCIPRLKSVTYCSFVNSLRSESYDKCFDE*VSALLTVTSAISSIWYSPRPTLRSRYISACLSCSLISVFMRNLLHRT*ECRLFIRSDHALKFT 310 G+ R A+ KS YC FV +L + SYD+C S L +TS ISSI YSPRPT RS YI CLS S+ISVFMRNLL RT E R F SD LK T Subject 1410 GVTFKRRCAASSASSKSFLYCLFVYALVTGSYDRCLVPYPSPYLALTSFISSILYSPRPTSRSIYIKPCLSSSVISVFMRNLLQRTSEWRDFNLSDQFLKLT 1715
Range 3: 1417 to 1626 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.8 bits(111) | 0.0 | 24/70(34%) | 0/70(0%) | Plus/Minus |
Query 94 VI*QVLR*ISLGASDRDFSHLIDLVLASPNVEV*IHQCLSVLLANLCIHEESAASDVRVQALHQIRPRTE 303 ++*Q+ + + DF H ++ V + + IHQ LS+L N C+HEESA + V+ L +RP E Subject 1417 IV*QMFGAVPVSIPGSDFIHFVNFVFTPTDE*IHIHQALSLLFCNFCVHEESATAH**VEGL*PVRPVPE 1626
Penicillium chrysogenum virus segment 1, complete genome
Range 1: 1396 to 1689 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
155.0 bits(332) | 0.0 | 60/98(61%) | 0/98(0%) | Minus/Plus |
Query 1 WSDLMKSLHSYVRCSRFLMNTEISEQDRQALMYLDLNVGRGEYQIDEMAEVTVRSAETYSSKHLSYDSDLKLFTNEQYVTDFSRGIQLAHMRIKHNPK 294 WSD MK+LHS VRCS+F MNT I+E+DRQALMY+DL VGRGEY +DEMAEV +R+ +TY++KHLSYD + ++FTN+QY DF ++ A++R+K PK Subject 1396 WSDKMKTLHSLVRCSKFFMNTRITEKDRQALMYMDLLVGRGEYTVDEMAEVELRTDDTYNTKHLSYDPNRQVFTNQQYKKDFITSVEEAYVRLKIEPK 1689
Range 2: 1392 to 1685 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
105.5 bits(224) | 0.0 | 52/98(53%) | 0/98(0%) | Plus/Minus |
Query 5 GLCLMRMWASCIPRLKSVTYCSFVNSLRSESYDKCFDE*VSALLTVTSAISSIWYSPRPTLRSRYISACLSCSLISVFMRNLLHRT*ECRLFIRSDHA 298 G L R +AS +KS YC V + R SYD+CF *VS++ + TSAISS YSPRPT +S YI AC S S+I VFM+NLL RT E +FI SD + Subject 1392 GSILSRTYASSTDVMKSFLYCWLVKTCRFGSYDRCFVL*VSSVRSSTSAISSTVYSPRPTSKSIYIKACRSFSVILVFMKNLLQRTSEWSVFILSDQS 1685
Range 3: 1396 to 1677 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
61.6 bits(128) | 0.0 | 32/94(34%) | 0/94(0%) | Plus/Minus |
Query 13 FDAHVGQLYPPAEVCNILFIRKQFEI*VI*QVLR*ISLGASDRDFSHLIDLVLASPNVEV*IHQCLSVLLANLCIHEESAASDVRVQALHQIRP 294 F HV E+ +L + + + V+ QV R + + ++ DF HLI+ +L+ P ++ IHQ L +L IHEE AA++ V+ LH I P Subject 1396 FKPHVCLFNGRDEILLVLLVSEDLPVWVVRQVFRIVGIISAQFDFCHLINGILSPPYQQIHIHQGLPILFCYPSIHEEFAATNQ*VECLHLI*P 1677
Amasya cherry disease associated chrysovirus segment 1, complete sequence
Range 1: 1260 to 1553 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
77.1 bits(162) | 0.0 | 34/98(35%) | 0/98(0%) | Minus/Plus |
Query 1 WSDLMKSLHSYVRCSRFLMNTEISEQDRQALMYLDLNVGRGEYQIDEMAEVTVRSAETYSSKHLSYDSDLKLFTNEQYVTDFSRGIQLAHMRIKHNPK 294 W K +H +R SR MNTE+ +Q +Q++MY+D VGR ++ D EV R ++H++YD + + EQY DF+ + A R+K P+ Subject 1260 WVYCQKMVHDLMRQSRHYMNTEVEQQTKQSIMYMDQLVGRRLFKPDWQKEVDDRQGNHGFAQHMAYDPNTGTWEVEQYRKDFNHALNDAFARVKSAPR 1553
Range 1: 1447 to 1671 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
57.4 bits(119) | 0.0 | 26/75(35%) | 0/75(0%) | Minus/Plus |
Query 1 SEQDRQALMYLDLNVGRGEYQIDEMAEVTVRSAETYSSKHLSYDSDLKLFTNEQYVTDFSRGIQLAHMRIKHNPK 225 SE+ RQ++MYLD +GR + DE AE+ + + H+SYD ++ ++ EQY DF ++ H+ + PK Subject 1447 SEEHRQSMMYLDCLLGRRIFIADEDAEIKDGTGSSGGMTHMSYDPVVRRWSVEQYRKDFMFALENLHIGMIEKPK 1671
Nucleotide Sequence (492 letters)
Query ID: | ds2016-55_22 |
Query definition: | No definition line |
Query length: | 575 |
Program: | TBLASTX 2.2.29+ |
Database: | /save/stheil/db/refseq_vir/viral.genomic.fna |
Graphic Summary
Descriptions
Alignments
Isaria javanica chrysovirus 1 isolate IjCV-1 capsid protein (CP) gene, complete cds
Range 1: 1050 to 1505 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
96.4 bits(204) | 0.0 | 47/152(31%) | 0/152(0%) | Plus/Plus |
Query 33 RMAADNMLASIMKYAADFSLQGSLEEAFVIACSINENKYLTQIALPTVVSKVDLVHTILAEQHKSDKLPDVTPGFCRIVGRMHQMTMLLLIKDVLHAAKVTTKQGHSADATIRGYLANHTPALNKAGCQLAGIPLWLMTPGMLWVNKIDDGD 488 R+ + + AS+M YA D G L++A VIACS+ +N+Y +++ LP VVS DL+ ++ P ++ R VGR+HQM I+D L AA+++T G + ++R YL + +++ ++ + L T M +++D D Subject 1050 RLTPNLIYASMMTYAMDTGCTGHLQQALVIACSLQQNRYFSKVKLPKVVSVYDLMVPAFSQPTSKLDKPILSLPMARSVGRLHQMLAFTAIRDNLTAAELSTSAGFDPEVSMRAYLKSQGLIVSRMSSFISELSLLEATSSMKIHDQLDVAD 1505
Penicillium chrysogenum virus segment 2, complete genome
Range 1: 1094 to 1525 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.4 bits(215) | 0.0 | 49/144(34%) | 0/144(0%) | Plus/Plus |
Query 57 ASIMKYAADFSLQGSLEEAFVIACSINENKYLTQIALPTVVSKVDLVHTILAEQHKSDKLPDVTPGFCRIVGRMHQMTMLLLIKDVLHAAKVTTKQGHSADATIRGYLANHTPALNKAGCQLAGIPLWLMTPGMLWVNKIDDGD 488 +SI+ YA D S L+EA +IACS+ EN+Y ++I LPTVVS DL+ Q+ + + ++ + VGR+HQM ++ KD++ A + ++ G IR YL +++ + + +L GI L+ TP M +++D D Subject 1094 SSILTYAMDTSCTDLLQEAQIIACSLQENRYFSRIGLPTVVSLYDLMVPAFIAQNSALEGARLSGDLSKAVGRVHQMLGMVAAKDIISATHMQSRTGFDPSHGIRQYLNSNSRLVTQMASKLTGIGLFDATPQMRIFSEMDTAD 1525
Amasya cherry disease associated chrysovirus segment 2, complete sequence
Range 1: 1170 to 1421 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.4 bits(108) | 0.0 | 26/84(31%) | 0/84(0%) | Plus/Plus |
Query 237 PDVTPGFCRIVGRMHQMTMLLLIKDVLHAAKVTTKQGHSADATIRGYLANHTPALNKAGCQLAGIPLWLMTPGMLWVNKIDDGD 488 P V +G++HQM++LL+IKDV+ AAKV+T+ +L N+ +++ + L TP M W I+ D Subject 1170 PHVNKETLATIGKLHQMSLLLMIKDVIIAAKVSTRSELDYRRVAMQWLNNYDMLMSRYNVNATALKLVEATPQMKWSYLINRDD 1421
Range 2: 987 to 1145 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
46.9 bits(96) | 0.0 | 19/53(36%) | 0/53(0%) | Plus/Plus |
Query 57 ASIMKYAADFSLQGSLEEAFVIACSINENKYLTQIALPTVVSKVDLVHTILAE 215 ++++KYAA+ LE A V+A S+ N+YL +++LP+V S +L+ + E Subject 987 SALVKYAAEVGSPNDLEPAMVVASSMYHNRYLQKVSLPSVSSVNELIMPAMVE 1145
Range 1: 1371 to 1613 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
64.3 bits(134) | 0.0 | 28/81(35%) | 0/81(0%) | Plus/Plus |
Query 237 PDVTPGFCRIVGRMHQMTMLLLIKDVLHAAKVTTKQGHSADATIRGYLANHTPALNKAGCQLAGIPLWLMTPGMLWVNKID 479 P V +G++HQM M L IKD+L AA+ +TK G + + + YL ++ + + L MTP M W+ KID Subject 1371 PSVAKELAISIGKLHQMCMFLTIKDILVAARGSTKAGFNYSSVVESYLTTQEEVVSVMNASVTPLRLLEMTPQMKWMYKID 1613
Range 2: 1140 to 1328 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
55.1 bits(114) | 0.0 | 22/63(35%) | 0/63(0%) | Plus/Plus |
Query 9 GVNSHFSCRMAADNMLASIMKYAADFSLQGSLEEAFVIACSINENKYLTQIALPTVVSKVDLV 197 G + ++ + ++ASI +YA + + LE A V A S+ N+YL ++ LP VVS +DL+ Subject 1140 GSSVNYHVELTPQMVMASITQYATESGIADELESALVCASSLYHNRYLARVGLPRVVSSIDLI 1328