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Nucleotide Sequence (426 letters)

Query ID:ds2016-57_12
Query definition:No definition line
Query length:638
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 1 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
43
86
129
172
215
258
301
344
387
426

Descriptions

Alignments

Fusarium graminearum dsRNA mycovirus 5 isolate HN1 segment RNA1, complete sequence

Sequence ID: KX380787.1 Length: 2030 Number of Matches: 4

Range 1: 1582 to 1944 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
158.2 bits(339) 0.0 73/121(60%) 0/121(0%) Plus/Plus
Query        5  GDAFDVVIPYRPIEETVARLYYPERVGGGATRTYLRALGNLLDNYGNPHAAKWLNGXXXXXXXXXXXXPVEWTSDTVQDAARDYTSELVVVPKPKRWSFEEWLALTLTPKEEITDMYTIA*  367
                G    V +PYRP EET   +YYPER   G  RTY RALGNLLDNYGNP  A WLN LLDWLE +++LLP +W  DTVQDAAR+YTS+LV VP+P RW+FEEW+ L L+P +   + Y  A*
Subject   1582  GRKITVALPYRPCEETFVHMYYPERKSEGVERTYQRALGNLLDNYGNPLMAAWLNKLLDWLEPQMELLPTDWLEDTVQDAARNYTSDLVRVPRPLRWTFEEWVHLCLSPDDSDPEWYMYA*  1944

Range 2: 1707 to 1940 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.6 bits(150) 0.0 40/78(51%) 0/78(0%) Minus/Minus
Query      130  AMVYISVISSFGVRVSASHSSNDHRLGFGTTTNSLV*SLAASCTVSDVHSTGSKSNRDSNQSRSPFSHLAACGLP*LS  363
                A +Y S   S G +   +HSSN HR G GT T SLV*  AAS TVS   S G+ S   SNQS + F+H A  G P*LS
Subject   1707  AYIYHSGSESSGDKHRCTHSSNVHRKGRGTLTRSLV*FRAAS*TVSSSQSVGNSSICGSNQSNNLFNHAAIRGFP*LS  1940

Range 3: 1596 to 1655 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.4 bits(49) 0.0 13/20(65%) 0/20(0%) Minus/Minus
Query       19  RSG*YRRATVSSMGR*GITT  78
                RSG*Y    VSS GR*G  T
Subject   1596  RSG*YMWTKVSSHGR*GSAT  1655

Range 4: 1705 to 1887 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.9 bits(107) 0.0 24/61(39%) 0/61(0%) Minus/Minus
Query      128  PFLKRPSFGLRNNYQLTGIVSGCVLHRVRCPFHW**VQSGLQPVKKSIQPLSSMRITVVIQ  310
                P LKRPS   R  +Q+TG+V   +L+RV  P     +   LQPV++ IQP    RI+++++
Subject   1705  PLLKRPSQRARYPHQITGVVPRRILNRVLQPISGQQLHLWLQPVQQFIQPCRHQRISIIVE  1887

Fusarium graminearum dsRNA mycovirus 4 segment dsRNA1, complete sequence

Sequence ID: GQ140627.1 Length: 2383 Number of Matches: 3

Range 1: 1935 to 2297 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
157.3 bits(337) 0.0 73/121(60%) 0/121(0%) Plus/Plus
Query        5  GDAFDVVIPYRPIEETVARLYYPERVGGGATRTYLRALGNLLDNYGNPHAAKWLNGXXXXXXXXXXXXPVEWTSDTVQDAARDYTSELVVVPKPKRWSFEEWLALTLTPKEEITDMYTIA*  367
                G    V +PYRP EET   +YYPER   G  RTY RALGNLLDNYGNP  A WLN LLDWLE +++LLP +W  DTVQDAARDYTS+LV VP+P RW+FEEW+ L L+  +   + Y  A*
Subject   1935  GRKITVALPYRPCEETFVHMYYPERKSEGVERTYQRALGNLLDNYGNPMMADWLNKLLDWLEPQMELLPTDWLEDTVQDAARDYTSDLVRVPRPLRWTFEEWVHLCLSSDDSDPEWYMYA*  2297

Range 2: 2060 to 2293 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.3 bits(147) 0.0 40/78(51%) 0/78(0%) Minus/Minus
Query      130  AMVYISVISSFGVRVSASHSSNDHRLGFGTTTNSLV*SLAASCTVSDVHSTGSKSNRDSNQSRSPFSHLAACGLP*LS  363
                A +Y S   S   +   +HSSN  R G GT T SLV*S AASCTVS   S G+ S   S+QS S FS  A  G P*LS
Subject   2060  AYIYHSGSESSDDKHKCTHSSNVQRNGRGTRTRSLV*SRAASCTVSSSQSVGNSSICGSSQSSSLFSQSAIIGFP*LS  2293

Range 3: 1949 to 2008 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
21.7 bits(41) 0.0 12/20(60%) 0/20(0%) Minus/Minus
Query       19  RSG*YRRATVSSMGR*GITT  78
                RSG*Y    VSS GR G  T
Subject   1949  RSG*YICTKVSSHGRYGKAT  2008

Fusarium graminearum dsRNA mycovirus 4 dsRNA1, complete genome

Sequence ID: NC_013470.1 Length: 2383 Number of Matches: 3

Range 1: 1935 to 2297 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
157.3 bits(337) 0.0 73/121(60%) 0/121(0%) Plus/Plus
Query        5  GDAFDVVIPYRPIEETVARLYYPERVGGGATRTYLRALGNLLDNYGNPHAAKWLNGXXXXXXXXXXXXPVEWTSDTVQDAARDYTSELVVVPKPKRWSFEEWLALTLTPKEEITDMYTIA*  367
                G    V +PYRP EET   +YYPER   G  RTY RALGNLLDNYGNP  A WLN LLDWLE +++LLP +W  DTVQDAARDYTS+LV VP+P RW+FEEW+ L L+  +   + Y  A*
Subject   1935  GRKITVALPYRPCEETFVHMYYPERKSEGVERTYQRALGNLLDNYGNPMMADWLNKLLDWLEPQMELLPTDWLEDTVQDAARDYTSDLVRVPRPLRWTFEEWVHLCLSSDDSDPEWYMYA*  2297

Range 2: 2060 to 2293 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.3 bits(147) 0.0 40/78(51%) 0/78(0%) Minus/Minus
Query      130  AMVYISVISSFGVRVSASHSSNDHRLGFGTTTNSLV*SLAASCTVSDVHSTGSKSNRDSNQSRSPFSHLAACGLP*LS  363
                A +Y S   S   +   +HSSN  R G GT T SLV*S AASCTVS   S G+ S   S+QS S FS  A  G P*LS
Subject   2060  AYIYHSGSESSDDKHKCTHSSNVQRNGRGTRTRSLV*SRAASCTVSSSQSVGNSSICGSSQSSSLFSQSAIIGFP*LS  2293

Range 3: 1949 to 2008 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
21.7 bits(41) 0.0 12/20(60%) 0/20(0%) Minus/Minus
Query       19  RSG*YRRATVSSMGR*GITT  78
                RSG*Y    VSS GR G  T
Subject   1949  RSG*YICTKVSSHGRYGKAT  2008

Gremmeniella abietina RNA virus 6 strain GaRV6_1 RNA dependent RNA polymerase gene, complete cds

Sequence ID: KJ742567.1 Length: 2165 Number of Matches: 9

Range 1: 1682 to 2032 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
161.4 bits(346) 0.0 73/117(62%) 0/117(0%) Plus/Plus
Query       17  DVVIPYRPIEETVARLYYPERVGGGATRTYLRALGNLLDNYGNPHAAKWLNGXXXXXXXXXXXXPVEWTSDTVQDAARDYTSELVVVPKPKRWSFEEWLALTLTPKEEITDMYTIA*  367
                + V+PYRP+EETVAR+ YPER        Y R LGNLLD YGNP  A+WLN LLDWLE +L  +P  WTSD+VQDAARDYT+  V VPKPKRWS+EEWL LTL+ K +  DMY + *
Subject   1682  EAVVPYRPMEETVARVLYPEREARDVLHLYERVLGNLLDGYGNPLTARWLNELLDWLEPKLAFMPTTWTSDSVQDAARDYTAVEVEVPKPKRWSWEEWLVLTLSEKRDAQDMYIVC*  2032

Range 2: 1795 to 2022 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.7 bits(196) 0.0 43/76(57%) 0/76(0%) Minus/Minus
Query      130  VYISVISSFGVRVSASHSSNDHRLGFGTTTNSLV*SLAASCTVSDVHSTGSKSNRDSNQSRSPFSHLAACGLP*LS  357
                +YIS  S F  RV+ +HSS+DHR GFGT+T++ V*S AASCT+S VH  G  ++  SNQS S FS  A  GLP* S
Subject   1795  IYISCASRFSERVNTNHSSHDHRFGFGTSTSTAV*SRAASCTLSLVHVVGINASLGSNQSSSSFSQRAVKGLP*PS  2022

Range 3: 1681 to 1746 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.0 bits(57) 0.0 14/22(64%) 0/22(0%) Minus/Minus
Query       16  TRSG*YRRATVSSMGR*GITTS  81
                +RSG   RATVSS+GR G T S
Subject   1681  SRSGYNTRATVSSIGRYGTTAS  1746

Range 4: 1711 to 2031 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.8 bits(133) 0.0 41/107(38%) 0/107(0%) Plus/Plus
Query       46  GNGSSPVLSRTCGWGSHSDLPTSFGKSLG*LR*SACC*VAEWTS*LVGVPIGLTTSGMDI*HGAGRSQRLYQ*VGSCSEAQTMVV*GMAGAHPNSERGDYRYVHHSL  366
                G+G + V+SRT   G  + +    G+S G LR*   C +AE  + LVG   G+    MD *  A RS  LY   G  +E + +V+ GM G +P  E G  RYV+  L
Subject   1711  GDGRTCVISRTRS*GCAAPV*KGAGQSAGRLR*PLNCTLAERAAGLVGAQAGVYADHMDQ*QRARRSPGLYGGGGGGAETKAVVMGGMVGVNPL*EAGRARYVYSLL  2031

Range 5: 1782 to 1922 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.3 bits(99) 0.0 20/47(43%) 0/47(0%) Plus/Plus
Query      117  WEISWITTVIRMLLSG*MDFLTGWSPDWTYYQWNGHLTRCRTQPETI  257
                W I W  TV   L +G*     GWSP W   + +G +T C+TQP  I
Subject   1782  WAICWTVTVTP*LHAG*TSCWIGWSPSWRLCRPHGPVTACKTQPGII  1922

Range 6: 1944 to 2018 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.4 bits(49) 0.0 11/25(44%) 0/25(0%) Plus/Plus
Query      279  RSPNDGRLRNGWRSP*LRKRRLQIC  353
                R+ + G  RNGW  P LR    +IC
Subject   1944  RNQSGGHGRNGWC*PSLRSGTRKIC  2018

Range 7: 1682 to 1864 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
39.1 bits(79) 0.0 19/61(31%) 0/61(0%) Minus/Minus
Query       17  QSGLQPVKKSIQPLSSMRITVVIQEIXXXXXXXXXXXPTHTFWIIQASYRFLNGPIGNYHI  199
                Q GLQP+++ +QP  S  +TV +Q+I+Q   +     P+ +FWI     R L+  + ++ +
Subject   1682  QLGLQPIQQLVQPACS*GVTVTVQQIAQHPFIQVQHIPSFSFWI*HTCDRLLHWTVRDHSL  1864

Range 8: 1883 to 2020 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.1 bits(68) 0.0 17/46(37%) 0/46(0%) Minus/Minus
Query      218  VHICNLLFRS*GERQPFLKRPSFGLRNNYQLTGIVSGCVLHRVRCP  355
                +HI  +     G  QPFL  P    R+ +    I+ GCVLH V  P
Subject   1883  IHILRVPLLREG*HQPFLP*PPLWFRHLHLHRRIIPGCVLHAVTGP  2020

Range 9: 1782 to 2018 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.1 bits(103) 0.0 29/79(37%) 0/79(0%) Minus/Minus
Query      117  TYL*SPLSELG*APAIPQTTIVWASEQLPTHWYSLWLRPAPCQMSIPLVVSPIGTPTSQEVHSAT*QHADYRSYPRDFP  353
                TYL  P S+ G  P IP  T    S   P   Y+  LR A C  S+    +P   PT+    SA+ Q   YR+ P D P
Subject   1782  TYLARPASQRGLTPTIPPMTTALVSAPPPPPPYNPGLRLARCHWSMWSA*TPAWAPTNPAARSASVQLRGYRNRPADCP  2018

Uncultured dsRNA virus genomic RNA containing putative RdRp, contig 507Hv1_454_3

Sequence ID: HE579625.1 Length: 639 Number of Matches: 4

Range 1: 299 to 622 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
177.9 bits(382) 0.0 79/108(73%) 0/108(0%) Plus/Plus
Query        2  GGDAFDVVIPYRPIEETVARLYYPERVGGGATRTYLRALGNLLDNYGNPHAAKWLNGXXXXXXXXXXXXPVEWTSDTVQDAARDYTSELVVVPKPKRWSFEEWLALTL  325
                G    +V+IPYRP+ ETVAR+YYPER      RTYLRALGNLLDNYGNP AA+WLN LLDWLE+R+D LP+EW+ DTVQDAARDYTSE V+VPKP+RW++EEWLALTL
Subject    299  GDSTEEVIIPYRPVAETVARMYYPERAANQPYRTYLRALGNLLDNYGNPIAARWLNDLLDWLEARVDTLPLEWSDDTVQDAARDYTSERVLVPKPRRWTYEEWLALTL  622

Range 2: 427 to 618 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.3 bits(193) 0.0 45/64(70%) 0/64(0%) Minus/Minus
Query      130  VSASHSSNDHRLGFGTTTNSLV*SLAASCTVSDVHSTGSKSNRDSNQSRSPFSHLAACGLP*LS  321
                V A+HSS  H LGFGT+T SLV*SLAASCTVS  HS+GS S R SNQS    SH AA GLP*LS
Subject    427  VRANHSS*VHLLGFGTSTLSLV*SLAASCTVSSDHSSGSVSTRASNQSNRSLSHRAAIGLP*LS  618

Range 3: 298 to 372 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
33.6 bits(67) 0.0 16/25(64%) 0/25(0%) Minus/Minus
Query        1  SG*YRRATVSSMGR*GITTSNASPP  75
                SG*Y  ATVS+ GR*GI TS+   P
Subject    298  SG*YILATVSATGR*GIITSSVESP  372

Range 4: 425 to 616 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.6 bits(104) 0.0 24/64(38%) 0/64(0%) Minus/Minus
Query      128  ERQPFLKRPSFGLRNNYQLTGIVSGCVLHRVRCPFHW**VQSGLQPVKKSIQPLSSMRITVVIQ  319
                E QP L  P   LR+ + L  ++  C+LHR+  P     V S LQP+++ I+P     I V+IQ
Subject    425  ESQPLLVGPPPRLRHQHPLASVIPRCILHRIIRPLQRQCVNSRLQPIQQIIKPSCRNWIAVIIQ  616