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Queries

Nucleotide Sequence (476 letters)

Query ID:ds2016-58_76
Query definition:No definition line
Query length:489
Program:TBLASTX 2.2.29+
Database:/save/stheil/db/refseq_vir/viral.genomic.fna

Graphic Summary

Distribution of 2 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
48
96
144
192
240
288
336
384
432
476

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
91.3 91.3 21% 5.984e-18 39% NC_030876

Alignments

Sophora japonica powdery mildew-associated partitivirus isolate HBJZ1510 putative coat protein gene, complete cds

Sequence ID: Length: 1918 Number of Matches: 1

Range 1: 666 to 959 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.3 bits(193) 0.0 38/98(39%) 0/98(0%) Plus/Plus
Query       36  ERRCLRHYENVGPAEAWPIPTPLLSIIQSLGAVQPPSKFYGKIIPSLPSLAGFTAGSSLAGIQNVPSILRVPIVPAMQQFLHNFGDNTADFVDEYLYP  329
                ER  L+      P E W + +P++  +QSLG+V+P    Y  I P+ P   GFTA  S  G+  VP I R+P + A Q+F+ NFG +T    D ++YP
Subject    666  ERTVLQMIIKTYPLEQWTVLSPMIGFLQSLGSVKPTDPMYSWICPAFPPFTGFTALHSYRGMSTVPGIQRMPPILAYQKFIFNFGAHTTQTRDAFVYP  959

Nucleotide Sequence (1389 letters)

Query ID:ds2016-58_76
Query definition:No definition line
Query length:489
Program:TBLASTX 2.2.29+
Database:/save/stheil/db/refseq_vir/viral.genomic.fna

Graphic Summary

Distribution of 2 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
139
278
417
556
695
834
973
1112
1251
1389

Descriptions

Alignments

Sclerotinia sclerotiorum partitivirus S segment 1, complete genome

Sequence ID: Length: 1874 Number of Matches: 13

Range 1: 137 to 880 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
297.1 bits(642) 0.0 127/248(51%) 0/248(0%) Plus/Plus
Query      159  KRFLNAHSRTSQREQRFITRMTKRAIYTHCQPELANQAINGYRRSATDPDSGEKDFLKTDQPYHDVPRDFHYKRALRVVEQLFRPHRRLKPIAFPDLRYFPWTISTAAEAPYTESAYWQEHIRQKAREGEIDTERITFHNLYNEIFHNNRSLIHDIKYGKSNFWTKSGEPIPYEFTYLHSRSHMVKSDKPDKIRAVFGVPKLLLMVENMFIWNLQREYLNRPLGESPLLWGFETIRGGWMKLLSKLNS  902
                K+  ++H++ S RE+     + K AI  H    L NQ + G RRS    +   +DF + +QP H VPRD HY RALRV E+L +P + L PI+FPDLRY+PWT + +AEAPY     ++E +R K R GEI+T   TFHNL +EIF +NR LIH IK G S FW K G+P PY  T LH+R+H+V  +  DKIRAVFGVPKLLLM ENMFIW LQ  YLN+   +  LLWG E ++GGW KL  +L +
Subject    137  KKIRSSHTKVSPREEATRFSILKHAILKHGSVGLLNQVLLGKRRSDASDERLIQDFHEFEQPVHPVPRDKHYLRALRVTEKLMKPAKTLHPISFPDLRYYPWTKNVSAEAPYNFEKKYEELLRDKQRLGEIETATATFHNLEDEIFEDNRYLIHKIKEGDSQFWDKDGKPRPYYHTTLHARAHVVGHEDADKIRAVFGVPKLLLMAENMFIWPLQAYYLNQDTTKHHLLWGNEIMKGGWKKLWGQLQN  880

Range 2: 1046 to 1297 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
122.5 bits(261) 0.0 52/84(62%) 0/84(0%) Plus/Plus
Query     1074  QQITRLWTWMCHAIKHTPIKAESGNMYQWRFNSIASGFQQTQLLDSFVNVIYLLTCLSAAGINIESDDFQVLVQGDDSVTSFPE  1325
                ++I  LW WM   +KH PI    G +YQW  N IASGFQQTQLLDSFVN+I LLT LSA GINIE  DF + VQGDDS+ S  E
Subject   1046  RRIENLWIWMTDMVKHYPILQPDGKVYQWTRNGIASGFQQTQLLDSFVNMIMLLTVLSANGINIEHPDFWIKVQGDDSLISIVE  1297

Range 3: 878 to 991 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.5 bits(152) 0.0 26/38(68%) 0/38(0%) Plus/Plus
Query      897  NSKFSNFTLSADWSGFDHKALHEVMDDVHDMWKSWFDF  1010
                N + S   LS DWS FD +ALHEV+DDVH MWKSWFDF
Subject    878  NGRISRTILSLDWSEFDKRALHEVIDDVHSMWKSWFDF  991

Range 4: 514 to 771 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.3 bits(193) 0.0 48/86(56%) 0/86(0%) Minus/Minus
Query      536  QMNMFSTISSSLGTPKTARILSGLSDLTICERECR*VNS*GIGSPDLVQKFDLPYLISCIKERLL*KISLYRLWNVILSVSISPSR  793
                QMNMFS I++S GTPKTARILS  S  T C   CR V  *G G P L Q ++ P  I  I+ RL  KIS  RLW V ++VSISP R
Subject    514  QMNMFSAINNSFGTPKTARILSASSCPTTCALACRVV***GRGFPSLSQNWESPSFIL*IR*RLSSKISSSRLWKVAVAVSISPRR  771

Range 5: 1063 to 1284 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.8 bits(133) 0.0 36/74(49%) 0/74(0%) Minus/Minus
Query     1091  VTESSP*TRTWKSSDSMLIPAAERHVSK*ITLTNESSSWVC*KPDAMELKRH*YMLPDSALMGVCLIAWHIQVQ  1312
                ++ESSP*T   KS  SMLIP A+  V   I LTNES S VC  PDA+    H*   P    MG CL    I +Q
Subject   1063  MSESSP*TLIQKSGCSMLIPFADSTVKSIIILTNESRSCVCWNPDAIPFLVH**TFPSGWRMG*CLTMSVIHIQ  1284

Range 6: 877 to 990 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.3 bits(97) 0.0 23/38(61%) 0/38(0%) Minus/Minus
Query      896  KSNHDFHMSWTSSITS*RAL*SKPLQSAERVKFENLEF  1009
                KSN DFHM WTSSITS RA  S   QS E +  E L F
Subject    877  KSNQDFHMEWTSSITSCRARLSNSDQSRESMVLEILPF  990

Range 7: 256 to 444 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
44.1 bits(90) 0.0 31/63(49%) 0/63(0%) Minus/Minus
Query      278  VQGKYLRSGKAIGFKRR*GLNNCSTTRSALL**KSRGTS**G*SVLRKSFSPESGSVADRR*P  466
                VQG YLRSGK IG +   G  + S TRSA  *  SRGT * G S   KS    S   ++RR P
Subject    256  VQG*YLRSGKDIGCRVFAGFISFSVTRSARR*CLSRGTG*TGCSNS*KS*IRRSSEASERRLP  444

Range 8: 817 to 864 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.5 bits(45) 0.0 8/16(50%) 0/16(0%) Minus/Minus
Query      839  RSFIHPPRMVSNPQSK  886
                +SF  PP ++S PQS+
Subject    817  QSFFQPPFIISFPQSR  864

Range 9: 1052 to 1198 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.1 bits(103) 0.0 23/49(47%) 0/49(0%) Minus/Minus
Query     1080  NHIDK*IEQLGLLKTGCYGVETPLIHVARFGLDGCVLDSMAHPGPESGD  1226
                NHI++*IE+L LL++ C  V  PLI+++    DG V D + HP PE  D
Subject   1052  NHINE*IEELRLLESRCNSVSCPLINLSIRLEDGIVFDHVGHPYPEVFD  1198

Range 10: 701 to 877 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.4 bits(95) 0.0 23/59(39%) 0/59(0%) Minus/Minus
Query      723  IQLAKKFHPSTSNGFESPE*GRFTKWAVEVFTLEVPDEHVLDH***FRYTEDSTDFVGL  899
                ++L+ +F P+  +   SPE*  F +  VE+  L  PDEHV  H***   +++S++F+G+
Subject    701  LKLSPEFLPAAFHYLVSPE*VMFGRILVEIVGL*WPDEHVFSH***LWNSKNSSNFIGV  877

Range 11: 911 to 991 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.0 bits(70) 0.0 12/27(44%) 0/27(0%) Minus/Minus
Query      930  KVKPRFPHVMDVVHNFMKSFVIKATPI  1010
                +V+PRFPH +DV+++F+ S  I+  P+
Subject    911  EVEPRFPHGVDVIYHFV*SSFIELRPV  991

Range 12: 1050 to 1292 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
44.1 bits(90) 0.0 29/81(36%) 0/81(0%) Plus/Plus
Query     1078  KSPDSGPGCAMLSSTHPSRPNLATCINGVSTP*HPVFNKPNCSIHLSM*FTY*RAFPPPVLTLNPMTSKSSFKVTTPSLVS  1320
                +S  SG G    S+T PS   +   ING  T  H   N+ + SIH  +*  +*+ +     TLN +T  S FK  T S  S
Subject   1050  ESKTSGYG*PTWSNTIPSSNRMERFINGQETELHLDSNRRSSSIHSLI*LCF*QYYQRTESTLNILTFGSKFKAMTHSFQS  1292

Range 13: 627 to 836 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
42.3 bits(86) 0.0 24/70(34%) 0/70(0%) Plus/Plus
Query      649  GPNPENRYPTSLLTCILVHIWLNPTSPTKSVLSSVYLNYY*WSRTCSSGTSSVNTSTAHLVNRPYSGDSK  858
                G   ENR  T        H+  +  +P K  L   + +YY*W +TCSSG      ST    N  YSG+++
Subject    627  GIKTENRALTITPPYTQEHML*DTKTPIKFELFLEFQSYY*WLKTCSSGHYKPTISTRIRPNITYSGETR  836

Sophora japonica powdery mildew-associated partitivirus isolate HBJZ1510 putative dependent RNA polymerase gene, complete cds

Sequence ID: Length: 1955 Number of Matches: 17

Range 1: 144 to 782 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
291.6 bits(630) 0.0 121/213(57%) 0/213(0%) Plus/Plus
Query      189  SQREQRFITRMTKRAIYTHCQPELANQAINGYRRSATDPDSGEKDFLKTDQPYHDVPRDFHYKRALRVVEQLFRPHRRLKPIAFPDLRYFPWTISTAAEAPYTESAYWQEHIRQKAREGEIDTERITFHNLYNEIFHNNRSLIHDIKYGKSNFWTKSGEPIPYEFTYLHSRSHMVKSDKPDKIRAVFGVPKLLLMVENMFIWNLQREYLNRPL  827
                S R  R    + KRAIY  C   LA Q I G++RS    D  E DFL++D PY D+ RDFHY RALRV E+LFRP R L PIAFPDLR++PW++S +AEAP++        IR +  +GE    R+TFHNLYNEIF  NR+LIH IK G  +FW K G P PY +  LH+R H+VKS +PDK+RAVFGVPKLLLM ENMFIW+LQ+EYLN+ +
Subject    144  SLRINRIRQGIIKRAIYKICPINLARQVIFGFKRSEGSDDVAETDFLRSDVPYFDMKRDFHYLRALRVCERLFRPSRTLHPIAFPDLRFYPWSLSVSAEAPFSVEKKRSTLIRSRQSDGEDLDGRLTFHNLYNEIFELNRNLIHQIKEGDKSFWNKDGTPRPYWYNTLHTRPHLVKSSEPDKLRAVFGVPKLLLMAENMFIWSLQKEYLNQKI  782

Range 2: 1017 to 1298 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
158.2 bits(339) 0.0 59/94(63%) 0/94(0%) Plus/Plus
Query     1050  YSDTKSREQQITRLWTWMCHAIKHTPIKAESGNMYQWRFNSIASGFQQTQLLDSFVNVIYLLTCLSAAGINIESDDFQVLVQGDDSVTSFPEMV  1331
                Y  +K+  Q+I RLW WMC+  K+TPIK +SG +YQW++N IASG+QQTQL+ SFVN IY+LTCLS  GINIESD+FQ+ VQGDDS+T F E++
Subject   1017  YPKSKTNPQKIERLWNWMCYCSKYTPIKGQSGQLYQWQYNGIASGYQQTQLIGSFVNSIYMLTCLSDLGINIESDNFQLFVQGDDSLTEFSEII  1298

Range 3: 783 to 968 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
103.2 bits(219) 0.0 35/62(56%) 0/62(0%) Plus/Plus
Query      831  ESPLLWGFETIRGGWMKLLSKLNSKFSNFTLSADWSGFDHKALHEVMDDVHDMWKSWFDFDQ  1016
                +SP+LWGFET +GGW+K+ +++ SK  +  LSADWSGFD  AL E +DD+H MW++WFDF +
Subject    783  QSPMLWGFETFKGGWLKIWNRMYSKKCSTFLSADWSGFDRFALFECVDDIHRMWRNWFDFSK  968

Range 4: 494 to 769 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
77.6 bits(163) 0.0 48/92(52%) 0/92(0%) Minus/Minus
Query      539  RYSRWRFQMNMFSTISSSLGTPKTARILSGLSDLTICERECR*VNS*GIGSPDLVQKFDLPYLISCIKERLL*KISLYRLWNVILSVSISPS  814
                +YS  + QMN+FS ISSS GTP TA  LSG  DLT     CR +  *G G P L QK   P LI  I+ R   KISL RL NV L    SPS
Subject    494  KYSFCKLQMNIFSAISSSFGTPNTALSLSGSLDLTR*GLVCRVLYQ*GRGVPSLFQKDLSPSLIW*IRFRFNSKISL*RL*NVSLPSKSSPS  769

Range 5: 1046 to 1294 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.5 bits(154) 0.0 42/83(51%) 0/83(0%) Minus/Minus
Query     1079  ISGKLVTESSP*TRTWKSSDSMLIPAAERHVSK*ITLTNESSSWVC*KPDAMELKRH*YMLPDSALMGVCLIAWHIQVQSRVI  1327
                IS   V  SSP*T++ K SDS+LIP +++HV+ *I LTN+  S VC* P+A+ L  H*   PD  L+GV     HIQ Q R I
Subject   1046  ISENSVKLSSP*TKS*KLSDSILIPRSDKHVNI*IELTNDPMS*VC**PEAIPLYCH**SWPD*PLIGVYFEQ*HIQFQRRSI  1294

Range 6: 785 to 967 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.8 bits(98) 0.0 27/61(44%) 0/61(0%) Minus/Minus
Query      833  WSKSNHDFHMSWTSSITS*RAL*SKPLQSAERVKFENLEFNLLRSFIHPPRMVSNPQSKGD  1015
                + KSN   H+   SS  S RA  S P QSA++      E+ L + F HPP  VS PQS GD
Subject    785  FEKSNQFLHIL*ISSTHSKRANRSNPDQSADKKVEHFFEYILFQIFNHPPLNVSKPQSIGD  967

Range 7: 173 to 418 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
43.7 bits(89) 0.0 38/82(46%) 0/82(0%) Minus/Minus
Query      218  QGKYLRSGKAIGFKRR*GLNNCSTTRSALL**KSRGTS**G*SVLRKSFSPESGSVADRR*PLIA*LASSG*Q*V*IARLVI  463
                QG   RSG AIG     G  + S TR A  **KS   S *G S  +KS S  S   +DR  P I  LA    Q +*IARL+I
Subject    173  QG*NRRSGNAIGCNVLEGRKSRSQTRRARK**KSLFISK*GTSDRKKSVSATSSLPSDRLKPKITCLARLIGQIL*IARLII  418

Range 8: 573 to 773 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.0 bits(105) 0.0 28/67(42%) 0/67(0%) Minus/Minus
Query      618  VEVFTLEVPDEHVLDH***FRYTEDSTDFVGLVGFNHM*TRMQVSKLVGYRFSGFGPEIRFTILDIV  818
                ++VF L  PDEH+  H***FR T+ S+ F+G   FN M  RM     VG   + F P+   T  ++V
Subject    573  IQVFLL*APDEHIFGH***FRDTKHSSKFIGFT*FNKMRPRM*SVVPVGSWSTIFIPKRFITFFNLV  773

Range 9: 1029 to 1196 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.9 bits(83) 0.0 21/56(38%) 0/56(0%) Minus/Minus
Query     1062  VNHIDK*IEQLGLLKTGCYGVETPLIHVARFGLDGCVLDSMAHPGPESGDLLFAGF  1229
                +N ++K*  +L LL T    +  PLI +AR   D  VL ++ HP P++ +LL   F
Subject   1029  IN*VNK*SNELSLLITRSDTIVLPLIELARLTFDRSVL*AVTHPVPKTFNLLRVSF  1196

Range 10: 291 to 446 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.9 bits(72) 0.0 18/52(35%) 0/52(0%) Minus/Minus
Query      336  GSFCCGADGPGKVSQVGKSDRLQTAVRSEQLFNYAECSLVMKVARDVMIRLI  491
                G FC     P   S+VGK +R+Q +  +++ F  +E S +MK++  + IR I
Subject    291  GCFC*N*KRPRVKSEVGKCNRMQCS*GTKESFTNSESS*IMKISFHIEIRNI  446

Range 11: 882 to 962 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.5 bits(45) 0.0 8/27(30%) 0/27(0%) Minus/Minus
Query      930  KVKPRFPHVMDVVHNFMKSFVIKATPI  1010
                K+KP  PH ++++    +S  I++ P+
Subject    882  KIKPISPHSVNIIDALEESKSIESGPV  962

Range 12: 628 to 768 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.6 bits(78) 0.0 20/47(43%) 0/47(0%) Plus/Plus
Query      673  PTSLLTCILVHIWLNPTSPTKSVLSSVYLNYY*WSRTCSSGTSSVNT  813
                PT     I   I LN  +P    L  V  NYY*W + CSSG    NT
Subject    628  PTGTTLYIRGLILLNQVNPINLELCLVSRNYY*WPKICSSGAYRRNT  768

Range 13: 1055 to 1207 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.6 bits(78) 0.0 18/51(35%) 0/51(0%) Plus/Plus
Query     1088  TLDLDVPCYQAHTHQGRIWQHVSMAFQLHSIRFSTNPTARFICQCDLLTDV  1240
                +L+LDV   + H+ Q  IW  +S+A Q +    STN T   IC  +L  ++
Subject   1055  SLELDVLLLKVHSDQRSIWPTLSVAIQWYRFWLSTNSTHWIIC*LNLYVNM  1207

Range 14: 81 to 185 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
26.3 bits(51) 0.0 12/35(34%) 0/35(0%) Plus/Plus
Query      114  TNLIRLGRAPMNRRTKRFLNAHSRTSQREQRFITR  218
                TNL+RLG+ P +++    L+   R ++  Q  I R
Subject     81  TNLLRLGKIPRSKKHNDPLSRSLRINRIRQGIIKR  185

Range 15: 1060 to 1263 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.9 bits(72) 0.0 26/68(38%) 0/68(0%) Plus/Plus
Query     1093  GPGCAMLSSTHPSRPNLATCINGVSTP*HPVFNKPNCSIHLSM*FTY*RAFPPPVLTLNPMTSKSSFK  1296
                G GC    ST  S+ NLA  I+G +     V NK N   HL   F  *  +    L LN  T  S FK
Subject   1060  GTGCVTAQSTLRSKVNLANSISGNTMVSLLVINKLNSLDHLLTQFIC*HVYLILGLILNLTTFNSLFK  1263

Range 16: 626 to 751 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.5 bits(69) 0.0 18/42(43%) 0/42(0%) Plus/Plus
Query      671  TLRVYLPAFSFTYG*IRQARQNPCCLRCT*TTTNGREHVHLE  796
                TL V    +  +  *I+  R    C+ C  TTTNGR++VHLE
Subject    626  TLLVQHSTYEASSC*IK*TR*T*SCVWCPETTTNGRKYVHLE  751

Range 17: 2 to 109 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.8 bits(50) 0.0 12/36(33%) 0/36(0%) Plus/Plus
Query      561  RITFHNLYNEIFHNNRSLIHDIKYGKSNFWTKSGEP  668
                RIT    YN +F  N S   ++ YG   F +   +P
Subject      2  RITSRRCYN*VFKFNISTQENLSYGFHKFTSTRKDP  109

Raphanus sativus cryptic virus 1 dsRNA 1, complete sequence

Sequence ID: Length: 1866 Number of Matches: 4

Range 1: 230 to 586 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
114.2 bits(243) 0.0 44/119(37%) 0/119(0%) Plus/Plus
Query      273  INGYRRSATDPDSGEKDFLKTDQPYHDVPRDFHYKRALRVVEQLFRPHRRLKPIAFPDLRYFPWTISTAAEAPYTESAYWQEHIRQKAREGEIDTERITFHNLYNEIFHNNRSLIHDIK  629
                +NGY RS  D D+ E+ F++ D    D+ +D +Y +A   V + FRP   + P+ F D+R++PW IST+AE P+T     ++ ++   + G +D  R++FHN YN+IF   R   H++K
Subject    230  LNGYYRSHADEDTAEQFFMRYDVEPFDIIKDNYYSQAFDTVTEWFRPSAPIHPVHFTDVRWYPWKISTSAERPFTHDPLLKKKVQLSKQLGLLDNARMSFHNCYNDIFTYCRHYTHEVK  586

Range 2: 584 to 742 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.5 bits(117) 0.0 23/53(43%) 0/53(0%) Plus/Plus
Query      654  KSGEPIPYEFTYLHSRSHMVKSDKPDKIRAVFGVPKLLLMVENMFIWNLQREY  812
                K   P+      LH +  +V+S +P KIR VFGVPK L+  E MF W L  +Y
Subject    584  KDARPVTLHHIDLHVKPALVRSGEPPKIRTVFGVPKSLIFAEAMFFWPLFSDY  742

Range 3: 755 to 841 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
39.6 bits(80) 0.0 12/29(41%) 0/29(0%) Plus/Plus
Query      831  ESPLLWGFETIRGGWMKLLSKLNSKFSNF  917
                E+PLLW +ET+ GGW +L  +   ++ +F
Subject    755  ETPLLWNYETLNGGWYRLNDEFYQQWQSF  841

Range 4: 860 to 967 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.2 bits(77) 0.0 15/36(42%) 0/36(0%) Plus/Plus
Query      930  DWSGFDHKALHEVMDDVHDMWKSWFDFDQGYEPSRS  1037
                DWS FD +    ++DD  D  KS+F F   Y P+R+
Subject    860  DWSEFDMRVYFSMLDDCRDAVKSYFCFCGNYCPTRT  967

Rosellinia necatrix partitivirus 2 RdRp gene for RNA-dependent RNA polymerase, complete cds

Sequence ID: Length: 1985 Number of Matches: 6

Range 1: 201 to 518 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
99.1 bits(210) 0.0 39/106(37%) 0/106(0%) Plus/Plus
Query      216  RMTKRAIYTHCQPELANQAINGYRRSATDPDSGEKDFLKTDQPYHDVPRDFHYKRALRVVEQLFRPHRRLKPIAFPDLRYFPWTISTAAEAPYTESAYWQEHIRQK  533
                R+   A+  H   +  +Q +NGYRRS  + D+  KD  K D   H V +D HY+ A++ V++L  P + L+P+ F DLR + W +ST   AP+  S +WQ++++ K
Subject    201  RIIDFALRKHLTSDEFDQVVNGYRRSPWNEDALNKDIEKLDSDEHTVIKDQHYENAIQHVQKLLTPEKPLQPVHFADLRRYKWRLSTNIGAPFASSKHWQDYVKAK  518

Range 2: 1104 to 1334 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.6 bits(150) 0.0 29/77(38%) 0/77(0%) Plus/Plus
Query     1038  NTHDYSDTKSREQQITRLWTWMCHAIKHTPIKAESGNMYQWRFNSIASGFQQTQLLDSFVNVIYLLTCLSAAGINIE  1268
                +T    D +S E +IT LW WM  AI  TP+   +G   ++  + I SG+ QTQ+LDS  N++ + T LS  G +++
Subject   1104  DTSKTKDGQSNEWRITNLWNWMTDAILSTPLLLPNGRFIRFNHSGIYSGYFQTQILDSIYNLVMIFTILSRMGFDLD  1334

Range 3: 747 to 851 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.0 bits(105) 0.0 20/35(57%) 0/35(0%) Plus/Plus
Query      696  SRSHMVKSDKPDKIRAVFGVPKLLLMVENMFIWNL  800
                +R H+VK+D+ DK+R VFG P  LL  E MFIW L
Subject    747  ARQHLVKADEDDKVRLVFGAPFSLLCAELMFIWPL  851

Range 4: 978 to 1040 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.5 bits(69) 0.0 11/21(52%) 0/21(0%) Plus/Plus
Query      921  LSADWSGFDHKALHEVMDDVH  983
                ++ DWSGFD  A H V+ D+H
Subject    978  VTVDWSGFDRYARHTVIKDIH  1040

Range 5: 891 to 941 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.3 bits(62) 0.0 10/17(59%) 0/17(0%) Plus/Plus
Query      840  LLWGFETIRGGWMKLLS  890
                +LW FETI GGW +L++
Subject    891  MLWTFETIIGGWYRLVN  941

Range 6: 1026 to 1094 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.8 bits(50) 0.0 9/23(39%) 0/23(0%) Plus/Plus
Query      966  VMDDVHDMWKSWFDFDQGYEPSR  1034
                + D  H + +  FDF  GY P+R
Subject   1026  IKDIHHRIIRPMFDFSHGYHPTR  1094

Arabidopsis halleri partitivirus 1 genomic RNA, segment 1, complete sequence

Sequence ID: Length: 1959 Number of Matches: 6

Range 1: 243 to 512 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
99.1 bits(210) 0.0 37/90(41%) 0/90(0%) Plus/Plus
Query      264  NQAINGYRRSATDPDSGEKDFLKTDQPYHDVPRDFHYKRALRVVEQLFRPHRRLKPIAFPDLRYFPWTISTAAEAPYTESAYWQEHIRQK  533
                N  +NGYRRS  + D+   D  K +  YH V +D HY +A+   ++LF P  +L+P+ F DLR++PW +ST+  AP+  S  W+++I QK
Subject    243  NIVVNGYRRSPWNEDALTADIEKLNSDYHHVNKDEHYYKAIEHTKKLFTPKEKLRPVHFNDLRHYPWQLSTSIGAPFATSEKWKDYINQK  512

Range 2: 1098 to 1295 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
64.8 bits(135) 0.0 26/66(39%) 0/66(0%) Plus/Plus
Query     1074  QQITRLWTWMCHAIKHTPIKAESGNMYQWRFNSIASGFQQTQLLDSFVNVIYLLTCLSAAGINIES  1271
                Q++  LW WM +AI  TP+    G   Q++ + I SG+ QTQ+LDS  N + + T LS  G ++ S
Subject   1098  QRLENLWNWMKNAILTTPLLLPDGTRLQFQHSGIYSGYFQTQILDSMYNCVMIFTVLSRMGFDLNS  1295

Range 3: 723 to 851 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.0 bits(118) 0.0 22/43(51%) 0/43(0%) Plus/Plus
Query      693  HSRSHMVKSDKPDKIRAVFGVPKLLLMVENMFIWNLQREYLNR  821
                H+R H+V++   DK+R VFG P  LLM E MFIW +Q   L R
Subject    723  HARQHLVEAGDEDKVRLVFGAPSTLLMAELMFIWPIQTSLLAR  851

Range 4: 861 to 944 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.3 bits(75) 0.0 13/28(46%) 0/28(0%) Plus/Plus
Query      834  SPLLWGFETIRGGWMKLLSKLNSKFSNF  917
                SP+LWG+ET  GGW +L +   S    F
Subject    861  SPMLWGYETTTGGWSRLYNWAYSALPRF  944

Range 5: 963 to 1022 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
33.6 bits(67) 0.0 11/20(55%) 0/20(0%) Plus/Plus
Query      930  DWSGFDHKALHEVMDDVHDM  989
                DWS FD  A H V+ D+HD+
Subject    963  DWSRFDKDARHTVITDIHDL  1022

Range 6: 1038 to 1109 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.5 bits(45) 0.0 9/24(38%) 0/24(0%) Plus/Plus
Query     1002  FDFDQGYEPSRSNTHDYSDTKSRE  1073
                FDF+ GY P+  N     D +  E
Subject   1038  FDFNSGYHPTIINPRSNPDPQRLE  1109