Queries
Nucleotide Sequence (333 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
251.2 | 791.3 | 29% | 3.406e-65 | 42% | GU108588.1 | |
212.3 | 472.7 | 45% | 1.806e-53 | 34% | KX898416.1 | |
212.3 | 472.7 | 45% | 1.806e-53 | 34% | NC_033277.1 | |
188.5 | 365.2 | 35% | 2.64e-46 | 36% | FN178512.1 | |
182.1 | 367.5 | 35% | 2.252e-44 | 32% | AF296439.1 |
Alignments
Grapevine associated chrysovirus 1 isolate Ctg446 putative RNA dependent RNA polymerase gene, partial cds
Sequence ID: GU108588.1 Length: 2879 Number of Matches: 6
Range 1: 1594 to 1923 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
251.2 bits(542) | 0.0 | 96/110(87%) | 0/110(0%) | Plus/Plus |
Query 3 PGSLAHFVVFCYILMLAERQEQIGSVRLNAMGDGDIRYFDRKMSTGMFHVLYDWADFNEQHSAWEMAQVIKELENVMPDTPDYSMFCSAIIEGMFRMGLEDREGMVHKLW 332 PGSLAHF+VFCYILMLAE+QEQIGSVRLNAMGDGDIRYFD+KMSTG FHVLYDWADFNEQHSAWEMAQVIKELE VMPDTPDY +FCSAI+EGM+ MGL+D+EG +HKLW Subject 1594 PGSLAHFIVFCYILMLAEKQEQIGSVRLNAMGDGDIRYFDKKMSTGTFHVLYDWADFNEQHSAWEMAQVIKELETVMPDTPDYHLFCSAIVEGMYEMGLQDKEGHLHKLW 1923
Range 2: 1593 to 1922 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
189.4 bits(407) | 0.0 | 88/110(80%) | 0/110(0%) | Minus/Minus |
Query 2 QSL*TMPSLSSRPILNIPSMIAEQNIE*SGVSGITFSSSLITWAISHAECCSLKSAQSYRTWNIPVDIFLSKYLISPSPIALSRTLPICSCLSASIRM*QKTTKCARLPG 331 QSL* PSLS PI IPS IA Q *SGVSGIT SSS IT AIS AECCSLKSAQSYRTWN+PVDIFLSKY ISPSPIALSRTLPICSC SASI+M*QKT K A+LPG Subject 1593 QSL*R*PSLSCSPISYIPSTIALQKRW*SGVSGITVSSSFITCAISQAECCSLKSAQSYRTWNVPVDIFLSKYRISPSPIALSRTLPICSCFSASIKM*QKTMKWAKLPG 1922
Range 3: 1597 to 1923 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.0 bits(238) | 0.0 | 49/109(45%) | 0/109(0%) | Minus/Minus |
Query 6 PELVNHALSVL*AHSEHSFYDCRTEHRVVGCVRHHVFQLLDNLGHFPRRVLLVEVCPVIQDVEHSGRHLPIKVSYIAVAHCVEPHTPDLLLSLS*HQDVTEDNEVRETS 332 P+ V VL H H+ Y E V+ VRH+ F+ NL HFP VLL+EVCP++QDVE S H ++V YI +AH ++P+ LLL LS HQDV E+NE+ + + Subject 1597 PKFVKMTFFVLQPHFIHTLYYSTAEEVVIWSVRHYGFKFFYNLCHFPS*VLLIEVCPIVQDVERSR*HFLVEVPYIPIAHSIKPNATYLLLLLSKHQDVAENNEMGQAT 1923
Range 4: 1617 to 1922 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
92.7 bits(196) | 0.0 | 53/102(52%) | 0/102(0%) | Plus/Plus |
Query 26 CLLLHPDAS*ETRADRECAAQRNGRRRYKIL**EDVYRNVPRPV*LGRLQRAALCVGNGPSYQGAGKRDA*HTRLLYVLFCNHRRNVQNGPRGQRGHGSQAL 331 C LLH DA *E ADR +A GR Y +L E+V NVPRPV LGRLQ AAL +GNG Y+ R+A*H+RL +L C R V NG QR SQ L Subject 1617 CFLLHLDAC*EAGADR*RSA*CYGRWGYTVLRQENVNGNVPRPVRLGRLQ*AALSLGNGTGYKRT*NRNA*HSRLPPLLQCYSRGYV*NGAARQRRSSSQTL 1922
Range 5: 1652 to 1924 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
74.4 bits(156) | 0.0 | 38/91(42%) | 0/91(0%) | Plus/Plus |
Query 61 KSRSGVCGSTQWATAI*DTLIGRCLPECSTSCMTGQTSTSSTLRGKWPKLSRSWKT*CLTHPTTLCSVLQS*KECSEWA*RTERAWFTSSG 333 +SR G WA I T +C E STSC GQTS SST GKW +L ++ K *CLT T S + *+ C +W +T++ FT+ G Subject 1652 RSR*VAFGLMLWAMGIYGTSTRKCQRERSTSCTIGQTSMSSTQLGKWHRL*KNLKP*CLTLQITTSSAVL**RVCMKWGCKTKKVIFTNFG 1924
Range 6: 1616 to 1831 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
71.6 bits(150) | 0.0 | 39/72(54%) | 0/72(0%) | Minus/Minus |
Query 25 CQASRFPAP**LGPFPTQSAAR*SLPSHTGRGTFR*TSSYQSILYRRRPLR*AAHSRSALVSQLASGCNRRQ 240 CQA RF * PFP SAA *SLP+ TGRGTF T S +S +Y RP *A SA SQ AS C+R+Q Subject 1616 CQALRFQVLL*PVPFPKLSAAH*SLPNRTGRGTFPLTFSCRSTVYPHRP*H*AERYLSAPASQQASRCSRKQ 1831
Isaria javanica chrysovirus 1 isolate IjCV 1 RNA dependent RNA polymerase (RdRp) gene, complete cds
Sequence ID: KX898416.1 Length: 3593 Number of Matches: 5
Range 1: 2008 to 2337 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
212.3 bits(457) | 0.0 | 82/110(75%) | 0/110(0%) | Plus/Plus |
Query 3 PGSLAHFVVFCYILMLAERQEQIGSVRLNAMGDGDIRYFDRKMSTGMFHVLYDWADFNEQHSAWEMAQVIKELENVMPDTPDYSMFCSAIIEGMFRMGLEDREGMVHKLW 332 PGSLAHF+VF Y+L+LAE+Q+QIGSVRLNA+ D DIRYFDRKMSTG FHVLYDWADFNEQHSA EMA VI++L MP PDY MFC A++ GM+ MGLEDREG+VHK+W Subject 2008 PGSLAHFIVFSYVLVLAEKQDQIGSVRLNALADVDIRYFDRKMSTGTFHVLYDWADFNEQHSADEMAGVIRKLSETMPAGPDYPMFCEALVRGMYTMGLEDREGVVHKIW 2337
Range 2: 2007 to 2324 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
130.7 bits(279) | 0.0 | 63/106(59%) | 0/106(0%) | Minus/Minus |
Query 2 TMPSLSSRPILNIPSMIAEQNIE*SGVSGITFSSSLITWAISHAECCSLKSAQSYRTWNIPVDIFLSKYLISPSPIALSRTLPICSCLSASIRM*QKTTKCARLPG 319 T PS SS PI+ IP A QNI *SG +G+ + IT AIS AECCSLKSAQSY TW +PV I SKYL+S S A RTLPI SC SA * KT KCA PG Subject 2007 TTPSRSSNPIVYIPRTKASQNIG*SGPAGMVSDNLRITPAISSAECCSLKSAQSYSTWKVPVLILRSKYLMSTSASAFKRTLPIWSCFSAKTNT*LKTMKCASEPG 2324
Range 3: 2023 to 2205 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.4 bits(108) | 0.0 | 25/61(41%) | 0/61(0%) | Minus/Minus |
Query 18 HFPRRVLLVEVCPVIQDVEHSGRHLPIKVSYIAVAHCVEPHTPDLLLSLS*HQDVTEDNEV 200 H VL V+V PVIQ +E + HL ++V + V+ C++ H DL+L L + VT+D EV Subject 2023 HLVSGVLFVKVSPVIQYMEGACAHLTVEVPDVDVSQCIQTHASDLVLLLGQN*YVTKDYEV 2205
Range 4: 2236 to 2337 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
25.8 bits(50) | 0.0 | 13/34(38%) | 0/34(0%) | Minus/Minus |
Query 231 PELVNHALSVL*AHSEHSFYDCRTEHRVVGCVRH 332 P V++ SVL H H+ + TEH VV H Subject 2236 PYFVDYTFSVLQPHRVHTPHQGFTEHWVVWACWH 2337
Range 5: 2066 to 2338 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.5 bits(106) | 0.0 | 31/91(34%) | 0/91(0%) | Plus/Plus |
Query 61 KSRSGVCGSTQWATAI*DTLIGRCLPECSTSCMTGQTSTSSTLRGKWPKLSRSWKT*CLTHPTTLCSVLQS*KECSEWA*RTERAWFTSSG 333 ++RS C W T+ T R S CMTG T T+ST +W S++ C TT CSV C+ W RTE+ T G Subject 2066 RTRSEACV*MHWLTSTSGTSTVR*AQAPSMYCMTGLTLTNSTPLTRWQG*YASYQRPCQQAQTTQCSVKPWCGVCTRWGWRTEKV*STKYG 2338
Isaria javanica chrysovirus 1 isolate IjCV 1 RNA dependent RNA polymerase (RdRp) gene, complete cds
Sequence ID: NC_033277.1 Length: 3593 Number of Matches: 5
Range 1: 2008 to 2337 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
212.3 bits(457) | 0.0 | 82/110(75%) | 0/110(0%) | Plus/Plus |
Query 3 PGSLAHFVVFCYILMLAERQEQIGSVRLNAMGDGDIRYFDRKMSTGMFHVLYDWADFNEQHSAWEMAQVIKELENVMPDTPDYSMFCSAIIEGMFRMGLEDREGMVHKLW 332 PGSLAHF+VF Y+L+LAE+Q+QIGSVRLNA+ D DIRYFDRKMSTG FHVLYDWADFNEQHSA EMA VI++L MP PDY MFC A++ GM+ MGLEDREG+VHK+W Subject 2008 PGSLAHFIVFSYVLVLAEKQDQIGSVRLNALADVDIRYFDRKMSTGTFHVLYDWADFNEQHSADEMAGVIRKLSETMPAGPDYPMFCEALVRGMYTMGLEDREGVVHKIW 2337
Range 2: 2007 to 2324 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
130.7 bits(279) | 0.0 | 63/106(59%) | 0/106(0%) | Minus/Minus |
Query 2 TMPSLSSRPILNIPSMIAEQNIE*SGVSGITFSSSLITWAISHAECCSLKSAQSYRTWNIPVDIFLSKYLISPSPIALSRTLPICSCLSASIRM*QKTTKCARLPG 319 T PS SS PI+ IP A QNI *SG +G+ + IT AIS AECCSLKSAQSY TW +PV I SKYL+S S A RTLPI SC SA * KT KCA PG Subject 2007 TTPSRSSNPIVYIPRTKASQNIG*SGPAGMVSDNLRITPAISSAECCSLKSAQSYSTWKVPVLILRSKYLMSTSASAFKRTLPIWSCFSAKTNT*LKTMKCASEPG 2324
Range 3: 2023 to 2205 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.4 bits(108) | 0.0 | 25/61(41%) | 0/61(0%) | Minus/Minus |
Query 18 HFPRRVLLVEVCPVIQDVEHSGRHLPIKVSYIAVAHCVEPHTPDLLLSLS*HQDVTEDNEV 200 H VL V+V PVIQ +E + HL ++V + V+ C++ H DL+L L + VT+D EV Subject 2023 HLVSGVLFVKVSPVIQYMEGACAHLTVEVPDVDVSQCIQTHASDLVLLLGQN*YVTKDYEV 2205
Range 4: 2236 to 2337 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
25.8 bits(50) | 0.0 | 13/34(38%) | 0/34(0%) | Minus/Minus |
Query 231 PELVNHALSVL*AHSEHSFYDCRTEHRVVGCVRH 332 P V++ SVL H H+ + TEH VV H Subject 2236 PYFVDYTFSVLQPHRVHTPHQGFTEHWVVWACWH 2337
Range 5: 2066 to 2338 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.5 bits(106) | 0.0 | 31/91(34%) | 0/91(0%) | Plus/Plus |
Query 61 KSRSGVCGSTQWATAI*DTLIGRCLPECSTSCMTGQTSTSSTLRGKWPKLSRSWKT*CLTHPTTLCSVLQS*KECSEWA*RTERAWFTSSG 333 ++RS C W T+ T R S CMTG T T+ST +W S++ C TT CSV C+ W RTE+ T G Subject 2066 RTRSEACV*MHWLTSTSGTSTVR*AQAPSMYCMTGLTLTNSTPLTRWQG*YASYQRPCQQAQTTQCSVKPWCGVCTRWGWRTEKV*STKYG 2338
Aspergillus fumigatus chrysovirus segment 1, complete sequence, isolate A 56, genomic RNA
Sequence ID: FN178512.1 Length: 3560 Number of Matches: 3
Range 1: 1953 to 2282 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
188.5 bits(405) | 0.0 | 72/110(65%) | 0/110(0%) | Plus/Plus |
Query 3 PGSLAHFVVFCYILMLAERQEQIGSVRLNAMGDGDIRYFDRKMSTGMFHVLYDWADFNEQHSAWEMAQVIKELENVMPDTPDYSMFCSAIIEGMFRMGLEDREGMVHKLW 332 PG+L HF+VF Y+L LAE+QEQ+GSVRLNA + DIRY DRKMS G+FHVLYDWA+FNEQHSAWEM VI++L +V+ DYS F AI+ GM+ MGL DREG +HK+W Subject 1953 PGTLVHFIVFTYVLYLAEKQEQVGSVRLNAANEVDIRYVDRKMSEGIFHVLYDWANFNEQHSAWEMGLVIEKLNSVIVAPRDYSFFVEAIVAGMYNMGLHDREGKIHKIW 2282
Range 2: 1952 to 2266 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
107.8 bits(229) | 0.0 | 55/105(52%) | 0/105(0%) | Minus/Minus |
Query 2 MPSLSSRPILNIPSMIAEQNIE*SGVSGITFSSSLITWAISHAECCSLKSAQSYRTWNIPVDIFLSKYLISPSPIALSRTLPICSCLSASIRM*QKTTKCARLPG 316 +PSLS P+L IP+ IA *S + IT S +T IS AECCSLK AQSY TW +P DI S YLIS S A RTLP CSC SA + * T K +PG Subject 1952 LPSLSCSPMLYIPATIASTKKL*SLGATITELSFSMTSPISQAECCSLKLAQSYSTWKMPSDILRSTYLISTSFAAFRRTLPTCSCFSARYKT*VNTIK*TNVPG 2266
Range 3: 1962 to 2282 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
68.9 bits(144) | 0.0 | 39/107(36%) | 0/107(0%) | Minus/Minus |
Query 12 PELVNHALSVL*AHSEHSFYDCRTEHRVVGCVRHHVFQLLDNLGHFPRRVLLVEVCPVIQDVEHSGRHLPIKVSYIAVAHCVEPHTPDLLLSLS*HQDVTEDNEVRE 332 P V LS++ H H+ Y+ + VV +H +L + HFP VLLVEV PVI VE + HL I + I + C++ +T LLL L * D++E N++ + Subject 1962 PYFVYFTLSIMQPHVIHTSYNSLHKETVVPRSYNH*VELFYDQSHFPS*VLLVEVGPVI*YVEDALGHLAIHIPDIHLIRCIQANTTHLLLFLC*I*DISEHNKMNQ 2282
Penicillium chrysogenum virus segment 1 RNA dependent RNA polymerase gene, complete cds
Sequence ID: AF296439.1 Length: 3562 Number of Matches: 3
Range 1: 1978 to 2307 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
182.1 bits(391) | 0.0 | 70/110(64%) | 0/110(0%) | Plus/Plus |
Query 3 PGSLAHFVVFCYILMLAERQEQIGSVRLNAMGDGDIRYFDRKMSTGMFHVLYDWADFNEQHSAWEMAQVIKELENVMPDTPDYSMFCSAIIEGMFRMGLEDREGMVHKLW 332 PG+L HFVVF Y+L LAE+Q QIGSVRLN + DIRYFD+KM TG+FHVLYDWADFNEQHSAWEM V+ L++++ DY++F AI+ GM+ MGL DR+G VHK+W Subject 1978 PGTLVHFVVFTYVLYLAEKQGQIGSVRLNTDSEVDIRYFDKKMCTGVFHVLYDWADFNEQHSAWEMGVVVDYLKHLIVAPRDYAVFVEAIVAGMYNMGLHDRDGNVHKIW 2307
Range 2: 1977 to 2300 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
122.0 bits(260) | 0.0 | 61/108(56%) | 0/108(0%) | Minus/Minus |
Query 2 L*TMPSLSSRPILNIPSMIAEQNIE*SGVSGITFSSSLITWAISHAECCSLKSAQSYRTWNIPVDIFLSKYLISPSPIALSRTLPICSCLSASIRM*QKTTKCARLPG 325 L*T+PSLS P+L IP+ +A *S + I T ISHAECCSLKSAQSY TWN PV IFLSK +S S SRTLPIC C SA R KTTK R+PG Subject 1977 L*TLPSLSCSPMLYIPATMASTKTA*SRGATIRCLR*STTTPISHAECCSLKSAQSYSTWNTPVHIFLSK*RMSTSLSVFSRTLPICPCFSAKYRTYVKTTK*TRVPG 2300
Range 3: 1987 to 2307 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
63.4 bits(132) | 0.0 | 34/107(32%) | 0/107(0%) | Minus/Minus |
Query 12 PELVNHALSVL*AHSEHSFYDCRTEHRVVGCVRHHVFQLLDNLGHFPRRVLLVEVCPVIQDVEHSGRHLPIKVSYIAVAHCVEPHTPDLLLSLS*HQDVTEDNEVRE 332 P +N A+SV+ H H+ Y + V+ + V +++ + H P VL VEV P+IQ VE+S HL ++++ + + V PHT +L L LS ++ +D+++ + Subject 1987 PYFMNIAVSVMQPHVVHTSYYGFNKDSVIAWCYN*VLEIVHHHTHLPC*VLFVEVSPIIQHVEYSCTHLLVEIADVNLTVRV*PHTSNLPLLLSQI*NICKDDKMNQ 2307
Nucleotide Sequence (395 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
279.7 | 801.5 | 31% | 1.291e-73 | 47% | GU108588.1 | |
271.4 | 755.4 | 29% | 3.924e-71 | 44% | KX898416.1 | |
271.4 | 755.4 | 29% | 3.924e-71 | 44% | NC_033277.1 | |
246.2 | 541.0 | 14% | 1.514e-63 | 31% | AF296439.1 | |
246.2 | 541.0 | 14% | 1.514e-63 | 31% | NC_007539.1 |
Alignments
Grapevine associated chrysovirus 1 isolate Ctg446 putative RNA dependent RNA polymerase gene, partial cds
Sequence ID: GU108588.1 Length: 2879 Number of Matches: 7
Range 1: 1837 to 2229 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
279.7 bits(604) | 0.0 | 109/131(83%) | 0/131(0%) | Minus/Plus |
Query 1 DYSMFCSAIIEGMFRMGLEDREGMVHKLWRGLYSGWRGTTWINTVLNFVYVAIALMNLERITGKSVVLMVDHGGDDLDLCLSQPEMMPQFMEIMDNMLFKANKWKQMFGIRSEFFRNTISGARVYASPTRA 393 DY +FCSAI+EGM+ MGL+D+EG +HKLWRGLYSGWRGTTWINTVLNF YV+IAL+N+ER+TG SVVLMVDHGGDDLDL LS+P +MP F+EIMDNMLFKANKWKQMFG RSEFFRNTISGARVYASPTRA Subject 1837 DYHLFCSAIVEGMYEMGLQDKEGHLHKLWRGLYSGWRGTTWINTVLNFCYVSIALLNMERLTGVSVVLMVDHGGDDLDLVLSEPSVMPTFLEIMDNMLFKANKWKQMFGKRSEFFRNTISGARVYASPTRA 2229
Range 2: 1851 to 2228 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
180.2 bits(387) | 0.0 | 85/126(67%) | 0/126(0%) | Plus/Minus |
Query 2 ALVGLA*TLAPDIVFLKNSDLIPNICFHLLALNSMLSMISMNWGIISGWLRHKSRSSPPWSTISTTLFPVILSRFISAIATYTKLRTVFIHVVPRHPEYNPLQSL*TIPSLSSKPMRNIPSMMAEQ 379 A VGLA TLAPD+VF KNS+ +PNICFHLLALNSMLS+IS N G+ G L +S+SSPPWSTI TTL PV LS F AI T K RTV IHVVPR PEYNP QSL* PSLS P+ IPS +A Q Subject 1851 ARVGLAYTLAPDMVFRKNSERLPNICFHLLALNSMLSIISRNVGMTLGSLSTRSKSSPPWSTIRTTLTPVSLSIFNRAIDT*QKFRTVLIHVVPRQPEYNPRQSL*R*PSLSCSPISYIPSTIALQ 2228
Range 3: 1975 to 2229 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
82.6 bits(174) | 0.0 | 40/85(47%) | 0/85(0%) | Plus/Minus |
Query 1 CSSRACVNSGPGYRVSEELRSDTEHLLPFVGLE*HVIHDFHELGHHFWLAETQVQIISAMVHH*HHAFSRYSFQIHQRDRYIYKV 255 C+ A V+S GY V E+L + TEHLLP +GLE*HV+H F E H WLAE +V II++MV+H + + I Q D +I K+ Subject 1975 CARWARVHSCAGYGVPEKL*ALTEHLLPLIGLE*HVVHYF*ERWHDTWLAEHEV*IIASMVNHQNDTDTSQPLHIQQSD*HITKI 2229
Range 4: 1868 to 1960 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
41.4 bits(84) | 0.0 | 19/31(61%) | 0/31(0%) | Plus/Minus |
Query 270 SMLSLATLSITLSKACEPYPLCLPNPCGTYP 362 S LS A+LSITL+K CE LCL P TYP Subject 1868 STLSRASLSITLAKVCEDDLLCLAAPFHTYP 1960
Range 5: 1868 to 2221 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
102.3 bits(217) | 0.0 | 62/118(53%) | 0/118(0%) | Minus/Plus |
Query 9 RVCSAWVWKTERVWFTSFGEGYTQGGEGQHG*IQFLTLYM*RSR**IWKE*REKAWC*WWTMAEMIWTCVSASQK*CPSSWKSWITCYSRPTNGXXXXXXXXXXXXXRYPGPEFTQAR 362 RVC W KT++V FT+FGEGYTQ G GQ G + M +S *IW+ * *W TM MI T SASQ C S K W TCYSRP +GSRCSVS +S S T YP E T+A+ Subject 1868 RVCMKWGCKTKKVIFTNFGEGYTQAGAGQRGSTRS*IFVMCQSLC*IWRG*LVSVSF*WLTMEAMI*TSCSASQVSCQRS*K*WTTCYSRPISGSRCSVSAQSFSGTPYPAQECTRAQ 2221
Range 6: 2049 to 2222 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
58.8 bits(122) | 0.0 | 29/58(50%) | 0/58(0%) | Minus/Plus |
Query 8 PWRR*SGLVSQPARNDAPVHGNHG*HAIQGQQMEADVRYQIGVLQKHDIRGQSLRKPD 181 PWRR* +Q A+ A V N+G HAIQGQ +EADVR + V +H IR +S+R+P+ Subject 2049 PWRR*FRPRAQRAKCHANVPRNNGQHAIQGQ*VEADVR*ALRVFPEHHIRRKSVREPN 2222
Range 7: 1836 to 2006 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
56.5 bits(117) | 0.0 | 27/57(47%) | 0/57(0%) | Minus/Plus |
Query 224 RLFNVLFSHHRGYVPHGFGRQRGYGSQALERVILRVARDNMDKYSS*LCICSDRADE 394 RL +L + RGYV +G RQR SQ L RVILR+ARDN+D++ +C +R+ E Subject 1836 RLPPLLQCYSRGYV*NGAARQRRSSSQTLARVILRLARDNVDQHGPKFLLCVNRSVE 2006
Isaria javanica chrysovirus 1 isolate IjCV 1 RNA dependent RNA polymerase (RdRp) gene, complete cds
Sequence ID: KX898416.1 Length: 3593 Number of Matches: 8
Range 1: 2251 to 2643 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
271.4 bits(586) | 0.0 | 106/131(81%) | 0/131(0%) | Minus/Plus |
Query 1 DYSMFCSAIIEGMFRMGLEDREGMVHKLWRGLYSGWRGTTWINTVLNFVYVAIALMNLERITGKSVVLMVDHGGDDLDLCLSQPEMMPQFMEIMDNMLFKANKWKQMFGIRSEFFRNTISGARVYASPTRA 393 DY MFC A++ GM+ MGLEDREG+VHK+W GLYSGWRGTTWIN+ LNF YV IAL NL RITG VVLMVDHGGDDLDL LSQP++MP F+EIMDNMLFKANKWKQMFG+RSEFFRNTISGARV+ASPTRA Subject 2251 DYPMFCEALVRGMYTMGLEDREGVVHKIWTGLYSGWRGTTWINSTLNFCYVFIALENLRRITGSEVVLMVDHGGDDLDLMLSQPDVMPLFLEIMDNMLFKANKWKQMFGLRSEFFRNTISGARVFASPTRA 2643
Range 2: 2250 to 2642 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
178.4 bits(383) | 0.0 | 85/131(65%) | 0/131(0%) | Plus/Minus |
Query 2 ALVGLA*TLAPDIVFLKNSDLIPNICFHLLALNSMLSMISMNWGIISGWLRHKSRSSPPWSTISTTLFPVILSRFISAIATYTKLRTVFIHVVPRHPEYNPLQSL*TIPSLSSKPMRNIPSMMAEQNIE*S 394 ALVGLA TLAP+IVFLKNSDL PNICFHLLAL S+LS+IS N GI SG L +SRSSPPWSTI TT PVI +F A+ T K + IHVVPR PEYNP+ L T PS SS P+ IP A QNI *S Subject 2250 ALVGLANTLAPEIVFLKNSDLNPNICFHLLALKSILSIISRNSGITSG*LSIRSRSSPPWSTIRTTSDPVIRRKFSRAMNT*QKFNVLLIHVVPRQPEYNPVHILWTTPSRSSNPIVYIPRTKASQNIG*S 2642
Range 3: 2258 to 2374 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
61.1 bits(127) | 0.0 | 22/39(56%) | 0/39(0%) | Minus/Plus |
Query 270 QCSVQPSSRVCSAWVWKTERVWFTSFGEGYTQGGEGQHG 386 QCSV+P VC+ W W+TE+V T +G+G TQ G GQHG Subject 2258 QCSVKPWCGVCTRWGWRTEKV*STKYGQGCTQAGGGQHG 2374
Range 4: 2490 to 2636 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
56.5 bits(117) | 0.0 | 24/49(49%) | 0/49(0%) | Minus/Plus |
Query 8 SQPARNDAPVHGNHG*HAIQGQQMEADVRYQIGVLQKHDIRGQSLRKPD 154 ++ AR A + G++G*+A QG MEA+VR ++ V +HD+RGQ +RKPD Subject 2490 AESARRYAAIPGDYG*YAFQG**MEANVRVKV*VF*EHDLRGQGVRKPD 2636
Range 5: 2455 to 2634 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
70.7 bits(148) | 0.0 | 28/60(47%) | 0/60(0%) | Plus/Minus |
Query 10 RACVNSGPGYRVSEELRSDTEHLLPFVGLE*HVIHDFHELGHHFWLAETQVQIISAMVHH 189 RAC + GP RV ++LR EHLLPF+ LE H+IH+ E H+ WL + +++I A+V+H Subject 2455 RACEHPGP*DRVPKKLRP*PEHLLPFISLEKHIIHNLQE*RHNVWLTQH*IKVIPAVVYH 2634
Range 6: 2252 to 2374 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
37.7 bits(76) | 0.0 | 21/41(51%) | 0/41(0%) | Plus/Minus |
Query 270 SMLSLATLSITLSKACEPYPLCLPNPCGTYPR*WLNRTLNN 392 SMLS A+LS TLS C + L P P TYP L+RTL + Subject 2252 SMLSPASLSTTLSIFCGLHLLGPPTPSCTYPAPRLHRTLGS 2374
Isaria javanica chrysovirus 1 isolate IjCV 1 RNA dependent RNA polymerase (RdRp) gene, complete cds
Sequence ID: NC_033277.1 Length: 3593 Number of Matches: 8
Range 1: 2251 to 2643 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
271.4 bits(586) | 0.0 | 106/131(81%) | 0/131(0%) | Minus/Plus |
Query 1 DYSMFCSAIIEGMFRMGLEDREGMVHKLWRGLYSGWRGTTWINTVLNFVYVAIALMNLERITGKSVVLMVDHGGDDLDLCLSQPEMMPQFMEIMDNMLFKANKWKQMFGIRSEFFRNTISGARVYASPTRA 393 DY MFC A++ GM+ MGLEDREG+VHK+W GLYSGWRGTTWIN+ LNF YV IAL NL RITG VVLMVDHGGDDLDL LSQP++MP F+EIMDNMLFKANKWKQMFG+RSEFFRNTISGARV+ASPTRA Subject 2251 DYPMFCEALVRGMYTMGLEDREGVVHKIWTGLYSGWRGTTWINSTLNFCYVFIALENLRRITGSEVVLMVDHGGDDLDLMLSQPDVMPLFLEIMDNMLFKANKWKQMFGLRSEFFRNTISGARVFASPTRA 2643
Range 2: 2250 to 2642 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
178.4 bits(383) | 0.0 | 85/131(65%) | 0/131(0%) | Plus/Minus |
Query 2 ALVGLA*TLAPDIVFLKNSDLIPNICFHLLALNSMLSMISMNWGIISGWLRHKSRSSPPWSTISTTLFPVILSRFISAIATYTKLRTVFIHVVPRHPEYNPLQSL*TIPSLSSKPMRNIPSMMAEQNIE*S 394 ALVGLA TLAP+IVFLKNSDL PNICFHLLAL S+LS+IS N GI SG L +SRSSPPWSTI TT PVI +F A+ T K + IHVVPR PEYNP+ L T PS SS P+ IP A QNI *S Subject 2250 ALVGLANTLAPEIVFLKNSDLNPNICFHLLALKSILSIISRNSGITSG*LSIRSRSSPPWSTIRTTSDPVIRRKFSRAMNT*QKFNVLLIHVVPRQPEYNPVHILWTTPSRSSNPIVYIPRTKASQNIG*S 2642
Range 3: 2258 to 2374 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
61.1 bits(127) | 0.0 | 22/39(56%) | 0/39(0%) | Minus/Plus |
Query 270 QCSVQPSSRVCSAWVWKTERVWFTSFGEGYTQGGEGQHG 386 QCSV+P VC+ W W+TE+V T +G+G TQ G GQHG Subject 2258 QCSVKPWCGVCTRWGWRTEKV*STKYGQGCTQAGGGQHG 2374
Range 4: 2490 to 2636 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
56.5 bits(117) | 0.0 | 24/49(49%) | 0/49(0%) | Minus/Plus |
Query 8 SQPARNDAPVHGNHG*HAIQGQQMEADVRYQIGVLQKHDIRGQSLRKPD 154 ++ AR A + G++G*+A QG MEA+VR ++ V +HD+RGQ +RKPD Subject 2490 AESARRYAAIPGDYG*YAFQG**MEANVRVKV*VF*EHDLRGQGVRKPD 2636
Range 5: 2455 to 2634 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
70.7 bits(148) | 0.0 | 28/60(47%) | 0/60(0%) | Plus/Minus |
Query 10 RACVNSGPGYRVSEELRSDTEHLLPFVGLE*HVIHDFHELGHHFWLAETQVQIISAMVHH 189 RAC + GP RV ++LR EHLLPF+ LE H+IH+ E H+ WL + +++I A+V+H Subject 2455 RACEHPGP*DRVPKKLRP*PEHLLPFISLEKHIIHNLQE*RHNVWLTQH*IKVIPAVVYH 2634
Range 6: 2252 to 2374 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
37.7 bits(76) | 0.0 | 21/41(51%) | 0/41(0%) | Plus/Minus |
Query 270 SMLSLATLSITLSKACEPYPLCLPNPCGTYPR*WLNRTLNN 392 SMLS A+LS TLS C + L P P TYP L+RTL + Subject 2252 SMLSPASLSTTLSIFCGLHLLGPPTPSCTYPAPRLHRTLGS 2374
Penicillium chrysogenum virus segment 1 RNA dependent RNA polymerase gene, complete cds
Sequence ID: AF296439.1 Length: 3562 Number of Matches: 5
Range 1: 2221 to 2613 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
246.2 bits(531) | 0.0 | 97/131(74%) | 0/131(0%) | Minus/Plus |
Query 1 DYSMFCSAIIEGMFRMGLEDREGMVHKLWRGLYSGWRGTTWINTVLNFVYVAIALMNLERITGKSVVLMVDHGGDDLDLCLSQPEMMPQFMEIMDNMLFKANKWKQMFGIRSEFFRNTISGARVYASPTRA 393 DY++F AI+ GM+ MGL DR+G VHK+WRGLYSGWRGTTWINTVLNF YV IAL N+ER+ G VVL VDHGGDD+DL LS+P +MP F+E+MD MLFKANKWKQMFG RSEFFRNTI RVYASPTRA Subject 2221 DYAVFVEAIVAGMYNMGLHDRDGNVHKIWRGLYSGWRGTTWINTVLNFCYVHIALQNVERLFGVRVVLYVDHGGDDIDLGLSEPAVMPWFLEVMDAMLFKANKWKQMFGTRSEFFRNTICDGRVYASPTRA 2613
Range 2: 2220 to 2612 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
155.5 bits(333) | 0.0 | 77/131(59%) | 0/131(0%) | Plus/Minus |
Query 2 ALVGLA*TLAPDIVFLKNSDLIPNICFHLLALNSMLSMISMNWGIISGWLRHKSRSSPPWSTISTTLFPVILSRFISAIATYTKLRTVFIHVVPRHPEYNPLQSL*TIPSLSSKPMRNIPSMMAEQNIE*S 394 A VGLA*T IVFLKNSD +PNICFHL ALN++ S+ S N GI +G L +S SSPP ST TT P S F A+ T KLRTVFIHVVPRHPE +P L*T+PSLS PM IP+ MA *S Subject 2220 ARVGLA*TRPSHIVFLKNSDRVPNICFHLFALNNIASITSKNQGITAGSLSPRSMSSPP*STYKTTRTPKSRSTF*RAMCT*QKLRTVFIHVVPRHPE*SPRHIL*TLPSLSCSPMLYIPATMASTKTA*S 2612
Range 3: 2344 to 2613 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
70.7 bits(148) | 0.0 | 28/90(31%) | 0/90(0%) | Plus/Minus |
Query 1 CSSRACVNSGPGYRVSEELRSDTEHLLPFVGLE*HVIHDFHELGHHFWLAETQVQIISAMVHH*HHAFSRYSFQIHQRDRYIYKVKNCIY 270 C R CV++ YR+ ++LR EHL P + L+ H IH + HH W V +I+A+++ HA ++ F + + + Y+ +++N +Y Subject 2344 CPCRTCVDTPIAYRIPKKLRPRPEHLFPLICLKQHRIHHLQKPRHHGWFT*P*VYVITAVINVQDHAHTKEPFHVLKSNVYVTEIENGVY 2613
Penicillium chrysogenum virus segment 1, complete genome
Sequence ID: NC_007539.1 Length: 3562 Number of Matches: 5
Range 1: 2221 to 2613 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
246.2 bits(531) | 0.0 | 97/131(74%) | 0/131(0%) | Minus/Plus |
Query 1 DYSMFCSAIIEGMFRMGLEDREGMVHKLWRGLYSGWRGTTWINTVLNFVYVAIALMNLERITGKSVVLMVDHGGDDLDLCLSQPEMMPQFMEIMDNMLFKANKWKQMFGIRSEFFRNTISGARVYASPTRA 393 DY++F AI+ GM+ MGL DR+G VHK+WRGLYSGWRGTTWINTVLNF YV IAL N+ER+ G VVL VDHGGDD+DL LS+P +MP F+E+MD MLFKANKWKQMFG RSEFFRNTI RVYASPTRA Subject 2221 DYAVFVEAIVAGMYNMGLHDRDGNVHKIWRGLYSGWRGTTWINTVLNFCYVHIALQNVERLFGVRVVLYVDHGGDDIDLGLSEPAVMPWFLEVMDAMLFKANKWKQMFGTRSEFFRNTICDGRVYASPTRA 2613
Range 2: 2220 to 2612 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
155.5 bits(333) | 0.0 | 77/131(59%) | 0/131(0%) | Plus/Minus |
Query 2 ALVGLA*TLAPDIVFLKNSDLIPNICFHLLALNSMLSMISMNWGIISGWLRHKSRSSPPWSTISTTLFPVILSRFISAIATYTKLRTVFIHVVPRHPEYNPLQSL*TIPSLSSKPMRNIPSMMAEQNIE*S 394 A VGLA*T IVFLKNSD +PNICFHL ALN++ S+ S N GI +G L +S SSPP ST TT P S F A+ T KLRTVFIHVVPRHPE +P L*T+PSLS PM IP+ MA *S Subject 2220 ARVGLA*TRPSHIVFLKNSDRVPNICFHLFALNNIASITSKNQGITAGSLSPRSMSSPP*STYKTTRTPKSRSTF*RAMCT*QKLRTVFIHVVPRHPE*SPRHIL*TLPSLSCSPMLYIPATMASTKTA*S 2612
Range 3: 2344 to 2613 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
70.7 bits(148) | 0.0 | 28/90(31%) | 0/90(0%) | Plus/Minus |
Query 1 CSSRACVNSGPGYRVSEELRSDTEHLLPFVGLE*HVIHDFHELGHHFWLAETQVQIISAMVHH*HHAFSRYSFQIHQRDRYIYKVKNCIY 270 C R CV++ YR+ ++LR EHL P + L+ H IH + HH W V +I+A+++ HA ++ F + + + Y+ +++N +Y Subject 2344 CPCRTCVDTPIAYRIPKKLRPRPEHLFPLICLKQHRIHHLQKPRHHGWFT*P*VYVITAVINVQDHAHTKEPFHVLKSNVYVTEIENGVY 2613
Nucleotide Sequence (355 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
171.1 | 340.4 | 25% | 5.261e-41 | 32% | KX898416.1 | |
171.1 | 340.4 | 25% | 5.261e-41 | 32% | NC_033277.1 | |
227.4 | 589.6 | 36% | 5.69e-58 | 39% | GU108588.1 | |
164.6 | 340.0 | 37% | 4.489e-39 | 33% | AF296439.1 | |
164.6 | 340.0 | 37% | 4.489e-39 | 33% | NC_007539.1 |
Alignments
Isaria javanica chrysovirus 1 isolate IjCV 1 RNA dependent RNA polymerase (RdRp) gene, complete cds
Sequence ID: KX898416.1 Length: 3593 Number of Matches: 3
Range 1: 1381 to 1731 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
171.1 bits(367) | 0.0 | 68/117(58%) | 0/117(0%) | Plus/Plus |
Query 5 VAEVGKPWMGVNFSAWSDLMKSLHSYVRCSRFLMNTEISEQDRQALMYLDLNVGRGEYQIDEMAEVTVRSAETYSSKHLSYDSDLKLFTNEQYVTDFSRGIQLAHMRIKHNPKPAQI 355 VAE+ KPW V+F WSD +KSLHS VRCSRFLMNTEI+E++RQ LMY+DL VGRGEY+IDEM EV R + Y +KHLSYD K +TN+QY DF + AH+R+K P+ + Subject 1381 VAEIVKPWFKVSFRNWSDRLKSLHSLVRCSRFLMNTEITEEERQGLMYMDLLVGRGEYKIDEMNEVRARYGDGYGTKHLSYDPVTKAYTNKQYKKDFELALDAAHLRLKVTPRKVNV 1731
Range 2: 1380 to 1715 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
110.6 bits(235) | 0.0 | 59/112(53%) | 0/112(0%) | Minus/Minus |
Query 4 GLCLMRMWASCIPRLKSVTYCSFVNSLRSESYDKCFDE*VSALLTVTSAISSI*YSPRPTLRSRYISACLSCSLISVFMRNLLHRT*ECRLFIRSDHALKFTPIHGLPTSAT 339 G+ R A+ KS YC FV +L + SYD+C S L +TS ISSI YSPRPT RS YI CLS S+ISVFMRNLL RT E R F SD LK T G SAT Subject 1380 GVTFKRRCAASSASSKSFLYCLFVYALVTGSYDRCLVPYPSPYLALTSFISSILYSPRPTSRSIYIKPCLSSSVISVFMRNLLQRTSEWRDFNLSDQFLKLTLNQGFTISAT 1715
Range 3: 1387 to 1626 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
58.8 bits(122) | 0.0 | 26/80(32%) | 0/80(0%) | Minus/Minus |
Query 11 VI*QVLR*ISLGASDRDFSHLIDLILASPNVEV*IHQCLSVLLANLCIHEKSAASDVRVQALHQIRPRTEVYPHPRFTHL 250 ++*Q+ + + DF H ++ + + + IHQ LS+L N C+HE+SA + V+ L +RP E PRF +L Subject 1387 IV*QMFGAVPVSIPGSDFIHFVNFVFTPTDE*IHIHQALSLLFCNFCVHEESATAH**VEGL*PVRPVPETDLEPRFHYL 1626
Isaria javanica chrysovirus 1 isolate IjCV 1 RNA dependent RNA polymerase (RdRp) gene, complete cds
Sequence ID: NC_033277.1 Length: 3593 Number of Matches: 3
Range 1: 1381 to 1731 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
171.1 bits(367) | 0.0 | 68/117(58%) | 0/117(0%) | Plus/Plus |
Query 5 VAEVGKPWMGVNFSAWSDLMKSLHSYVRCSRFLMNTEISEQDRQALMYLDLNVGRGEYQIDEMAEVTVRSAETYSSKHLSYDSDLKLFTNEQYVTDFSRGIQLAHMRIKHNPKPAQI 355 VAE+ KPW V+F WSD +KSLHS VRCSRFLMNTEI+E++RQ LMY+DL VGRGEY+IDEM EV R + Y +KHLSYD K +TN+QY DF + AH+R+K P+ + Subject 1381 VAEIVKPWFKVSFRNWSDRLKSLHSLVRCSRFLMNTEITEEERQGLMYMDLLVGRGEYKIDEMNEVRARYGDGYGTKHLSYDPVTKAYTNKQYKKDFELALDAAHLRLKVTPRKVNV 1731
Range 2: 1380 to 1715 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
110.6 bits(235) | 0.0 | 59/112(53%) | 0/112(0%) | Minus/Minus |
Query 4 GLCLMRMWASCIPRLKSVTYCSFVNSLRSESYDKCFDE*VSALLTVTSAISSI*YSPRPTLRSRYISACLSCSLISVFMRNLLHRT*ECRLFIRSDHALKFTPIHGLPTSAT 339 G+ R A+ KS YC FV +L + SYD+C S L +TS ISSI YSPRPT RS YI CLS S+ISVFMRNLL RT E R F SD LK T G SAT Subject 1380 GVTFKRRCAASSASSKSFLYCLFVYALVTGSYDRCLVPYPSPYLALTSFISSILYSPRPTSRSIYIKPCLSSSVISVFMRNLLQRTSEWRDFNLSDQFLKLTLNQGFTISAT 1715
Range 3: 1387 to 1626 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
58.8 bits(122) | 0.0 | 26/80(32%) | 0/80(0%) | Minus/Minus |
Query 11 VI*QVLR*ISLGASDRDFSHLIDLILASPNVEV*IHQCLSVLLANLCIHEKSAASDVRVQALHQIRPRTEVYPHPRFTHL 250 ++*Q+ + + DF H ++ + + + IHQ LS+L N C+HE+SA + V+ L +RP E PRF +L Subject 1387 IV*QMFGAVPVSIPGSDFIHFVNFVFTPTDE*IHIHQALSLLFCNFCVHEESATAH**VEGL*PVRPVPETDLEPRFHYL 1626
Grapevine associated chrysovirus 1 isolate Ctg446 putative RNA dependent RNA polymerase gene, partial cds
Sequence ID: GU108588.1 Length: 2879 Number of Matches: 5
Range 1: 982 to 1314 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.4 bits(490) | 0.0 | 88/111(79%) | 0/111(0%) | Plus/Plus |
Query 20 KPWMGVNFSAWSDLMKSLHSYVRCSRFLMNTEISEQDRQALMYLDLNVGRGEYQIDEMAEVTVRSAETYSSKHLSYDSDLKLFTNEQYVTDFSRGIQLAHMRIKHNPKPAQ 352 K WMGVNF WSD+MKSLHSY+RCSRFLMNTEI+EQDRQ+LMY+DL VGRGEYQIDEMAEV++R ++TYSSKHLSY+ DLK FTNEQY+ DFSR +Q+AHMRIKHNPKP Q Subject 982 KKWMGVNFHHWSDVMKSLHSYIRCSRFLMNTEITEQDRQSLMYMDLLVGRGEYQIDEMAEVSLRQSDTYSSKHLSYNPDLKAFTNEQYIKDFSRSVQIAHMRIKHNPKPLQ 1314
Range 2: 966 to 1307 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
150.4 bits(322) | 0.0 | 71/114(62%) | 0/114(0%) | Minus/Minus |
Query 4 GLGLCLMRMWASCIPRLKSVTYCSFVNSLRSESYDKCFDE*VSALLTVTSAISSI*YSPRPTLRSRYISACLSCSLISVFMRNLLHRT*ECRLFIRSDHALKFTPIHGLPTSAT 345 G GLC MRM A R KS+ YCS VN+ RS D+C DE VS +TSAISSI*YSPRPT RS YI CLSCS+ISVF+RNLLH *EC+LFI SD K TPIH L T Subject 966 GFGLCFMRMCAIWTDREKSLIYCSLVNAFRSGL*DRCLDEYVSDWRRLTSAISSI*YSPRPTNRSMYIRLCLSCSVISVFIRNLLHLM*ECKLFITSDQ**KLTPIHFLTMKLT 1307
Range 3: 988 to 1308 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
84.5 bits(178) | 0.0 | 45/107(42%) | 0/107(0%) | Minus/Minus |
Query 26 RLRIVFDAHVGQLYPPAEVCNILFIRKQFEI*VI*QVLR*ISLGASDRDFSHLIDLILASPNVEV*IHQCLSVLLANLCIHEKSAASDVRVQALHQIRPRTEVYPHP 346 RLR+V AHV L EV +ILF+ + F I ++ Q+L *+ + + D HLI+LIL S N V +H L VL +H+KSAA V +Q LH I P ++ HP Subject 988 RLRVVLYAHVCYLDRSREVFDILFVGECF*IWIVGQMLG*VCV*LAKADLCHLINLILTSSNQ*VHVH*ALPVLFCYFSVHQKSAAPYVGMQTLHHIGPMMKIDTHP 1308
Range 4: 1011 to 1298 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
67.0 bits(140) | 0.0 | 38/96(40%) | 0/96(0%) | Plus/Plus |
Query 49 VVGSDEEPALLRPMQQISHEYRD*RAGQTSTDVSRPQRWARRVSNR*DG*SHGQKRRDLFIEALVI*LRSQTVYE*TVCYRLQPGDTAGPHAHQTQ 336 +V DEE A L +QQIS E+ + R GQ +V P W R VSN *DG R + I+A V+ RS+++++ TV RL HAH+ Q Subject 1011 LVRCDEEFAFLHKVQQISDEH*NNRTGQAEPNVHGPIGWTR*VSN**DGRGQPSPVRHILIQASVLQSRSKSIHQRTVYQRLLSIGPNSTHAHKAQ 1298
Range 5: 989 to 1306 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
60.2 bits(125) | 0.0 | 41/106(39%) | 0/106(0%) | Plus/Plus |
Query 27 GWG*TSVRGRI**RACTLTSDAADFS*IQRLASRTDKH*CI*TSTLGEASIKSMRWLKSRSEAPRLIHRSTCHMTQISNCLRMNSMLQTSAGGYSWPTCASNTILS 344 GW + G +**R C T AADF * + +RT + *C T L E SIK MRW +S + H S C QI NS+ +TS TCA +T S Subject 989 GWVSIFIIGPM**RVCIPT*GAADF**TLK*QNRTGRA*CTWTYWLDEVSIKLMRWQRSAFASQTHTHPSICPTIQI*KHSPTNSISKTSLDRSK*HTCA*STTRS 1306
Penicillium chrysogenum virus segment 1 RNA dependent RNA polymerase gene, complete cds
Sequence ID: AF296439.1 Length: 3562 Number of Matches: 3
Range 1: 1369 to 1701 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
164.6 bits(353) | 0.0 | 64/111(58%) | 0/111(0%) | Plus/Plus |
Query 23 PWMGVNFSAWSDLMKSLHSYVRCSRFLMNTEISEQDRQALMYLDLNVGRGEYQIDEMAEVTVRSAETYSSKHLSYDSDLKLFTNEQYVTDFSRGIQLAHMRIKHNPKPAQI 355 PW V WSD MK+LHS VRCS+F MNT I+E+DRQALMY+DL VGRGEY +DEMAEV +R+ +TY++KHLSYD + ++FTN+QY DF ++ A++R+K PKP + Subject 1369 PWFKVCERDWSDKMKTLHSLVRCSKFFMNTRITEKDRQALMYMDLLVGRGEYTVDEMAEVELRTDDTYNTKHLSYDPNRQVFTNQQYKKDFITSVEEAYVRLKIEPKPVNV 1701
Range 2: 1368 to 1691 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
111.5 bits(237) | 0.0 | 56/108(52%) | 0/108(0%) | Minus/Minus |
Query 22 GLGLCLMRMWASCIPRLKSVTYCSFVNSLRSESYDKCFDE*VSALLTVTSAISSI*YSPRPTLRSRYISACLSCSLISVFMRNLLHRT*ECRLFIRSDHALKFTPIHG 345 G G L R +AS +KS YC V + R SYD+CF *VS++ + TSAISS YSPRPT +S YI AC S S+I VFM+NLL RT E +FI SD + T HG Subject 1368 GFGSILSRTYASSTDVMKSFLYCWLVKTCRFGSYDRCFVL*VSSVRSSTSAISSTVYSPRPTSKSIYIKACRSFSVILVFMKNLLQRTSEWSVFILSDQSRSQTLNHG 1691
Range 3: 1396 to 1701 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
63.8 bits(133) | 0.0 | 34/102(33%) | 0/102(0%) | Minus/Minus |
Query 50 NLSRLRIVFDAHVGQLYPPAEVCNILFIRKQFEI*VI*QVLR*ISLGASDRDFSHLIDLILASPNVEV*IHQCLSVLLANLCIHEKSAASDVRVQALHQIRP 355 ++ RL F HV E+ +L + + + V+ QV R + + ++ DF HLI+ IL+ P ++ IHQ L +L IHE+ AA++ V+ LH I P Subject 1396 DIDRLWFYFKPHVCLFNGRDEILLVLLVSEDLPVWVVRQVFRIVGIISAQFDFCHLINGILSPPYQQIHIHQGLPILFCYPSIHEEFAATNQ*VECLHLI*P 1701
Penicillium chrysogenum virus segment 1, complete genome
Sequence ID: NC_007539.1 Length: 3562 Number of Matches: 3
Range 1: 1369 to 1701 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
164.6 bits(353) | 0.0 | 64/111(58%) | 0/111(0%) | Plus/Plus |
Query 23 PWMGVNFSAWSDLMKSLHSYVRCSRFLMNTEISEQDRQALMYLDLNVGRGEYQIDEMAEVTVRSAETYSSKHLSYDSDLKLFTNEQYVTDFSRGIQLAHMRIKHNPKPAQI 355 PW V WSD MK+LHS VRCS+F MNT I+E+DRQALMY+DL VGRGEY +DEMAEV +R+ +TY++KHLSYD + ++FTN+QY DF ++ A++R+K PKP + Subject 1369 PWFKVCERDWSDKMKTLHSLVRCSKFFMNTRITEKDRQALMYMDLLVGRGEYTVDEMAEVELRTDDTYNTKHLSYDPNRQVFTNQQYKKDFITSVEEAYVRLKIEPKPVNV 1701
Range 2: 1368 to 1691 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
111.5 bits(237) | 0.0 | 56/108(52%) | 0/108(0%) | Minus/Minus |
Query 22 GLGLCLMRMWASCIPRLKSVTYCSFVNSLRSESYDKCFDE*VSALLTVTSAISSI*YSPRPTLRSRYISACLSCSLISVFMRNLLHRT*ECRLFIRSDHALKFTPIHG 345 G G L R +AS +KS YC V + R SYD+CF *VS++ + TSAISS YSPRPT +S YI AC S S+I VFM+NLL RT E +FI SD + T HG Subject 1368 GFGSILSRTYASSTDVMKSFLYCWLVKTCRFGSYDRCFVL*VSSVRSSTSAISSTVYSPRPTSKSIYIKACRSFSVILVFMKNLLQRTSEWSVFILSDQSRSQTLNHG 1691
Range 3: 1396 to 1701 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
63.8 bits(133) | 0.0 | 34/102(33%) | 0/102(0%) | Minus/Minus |
Query 50 NLSRLRIVFDAHVGQLYPPAEVCNILFIRKQFEI*VI*QVLR*ISLGASDRDFSHLIDLILASPNVEV*IHQCLSVLLANLCIHEKSAASDVRVQALHQIRP 355 ++ RL F HV E+ +L + + + V+ QV R + + ++ DF HLI+ IL+ P ++ IHQ L +L IHE+ AA++ V+ LH I P Subject 1396 DIDRLWFYFKPHVCLFNGRDEILLVLLVSEDLPVWVVRQVFRIVGIISAQFDFCHLINGILSPPYQQIHIHQGLPILFCYPSIHEEFAATNQ*VECLHLI*P 1701
Nucleotide Sequence (309 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
184.4 | 509.4 | 33% | 4.117e-45 | 35% | GU108588.1 | |
157.3 | 310.2 | 52% | 5.546e-37 | 37% | KX898416.1 | |
157.3 | 310.2 | 52% | 5.546e-37 | 37% | NC_033277.1 | |
141.3 | 282.3 | 38% | 3.73e-32 | 29% | AF296439.1 | |
141.3 | 282.3 | 38% | 3.73e-32 | 29% | NC_007539.1 |
Alignments
Grapevine associated chrysovirus 1 isolate Ctg446 putative RNA dependent RNA polymerase gene, partial cds
Sequence ID: GU108588.1 Length: 2879 Number of Matches: 5
Range 1: 1255 to 1560 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
184.4 bits(396) | 0.0 | 75/102(74%) | 0/102(0%) | Plus/Plus |
Query 2 FSRGIQLAHMRIKHNAKPVNVASCGEFYRKRLGWITIGGLVYNKLPKGMKVFSAEVFDAVASTVEEIQGRHNKKSLFEMNDLYEILVGVNRDNFNLTKTMIK 307 FSR +Q+AHMRIKHN KP+ + +FYR R WIT GGLV N LPKGMK FSA++FDAVA+TVEEI+GRHNKKSLFEMN+LY+ILVGVNR NFN+TKTMIK Subject 1255 FSRSVQIAHMRIKHNPKPLQFTTFTDFYRARHTWITKGGLVSNTLPKGMKQFSAQIFDAVAATVEEIEGRHNKKSLFEMNELYDILVGVNRHNFNVTKTMIK 1560
Range 2: 1254 to 1562 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
126.6 bits(270) | 0.0 | 61/103(59%) | 0/103(0%) | Minus/Minus |
Query 1 YLIIVLVRLKLSRLTPTSISYRSFISNRDFLLCLPCISSTVLATASKTSAEKTFIPFGNLL*TRPPMVIQPSRLR*NSPQLATFTGLALCLIRM*ASWIPRLK 309 YLI+VLV LKL TPTSIS SFISN DFLLCLP ISSTV ATAS AE FIP G++L T PP+VIQ R* S + G LC +RM A W R K Subject 1254 YLIMVLVTLKLCLFTPTSIS*SSFISNNDFLLCLPSISSTVAATASNICAENCFIPLGSVLLTSPPLVIQVCLAR*KSVNVVNCNGFGLCFMRMCAIWTDREK 1562
Range 3: 1255 to 1557 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
89.5 bits(189) | 0.0 | 39/101(39%) | 0/101(0%) | Minus/Minus |
Query 2 DHRLGEIKIVTVDADEYFVQVIHFEQRFFVVPALYLLDRACHCIEDLSRKDLHSFRQLVVDKASYGYPTKSLAIKFAATGNIYRFGIVLDSHVS*LDPTTE 304 DH LG I++V V +Y ++ IHF+QRFFVVP Y L+ + IE L R+ LH+F Q + + ++G P+ ++ + G + R +VL +HV LD + E Subject 1255 DHGLGNIEVVPVYTHKYIIEFIHFKQRFFVVPTFYFLNSGSNSIEYLCRELLHTFGQRIAYQPTFGNPSVPGPVEISKRGEL*RLRVVLYAHVCYLDRSRE 1557
Range 4: 1268 to 1558 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
56.5 bits(117) | 0.0 | 35/97(36%) | 0/97(0%) | Minus/Minus |
Query 15 *SSSW*D*NCHG*RRRVFRTGHSFRTEIFCCACPVSPRPCLPLHRRPQQKRPSFLSATCCRQGLLWLSNQVACDKIRRNWQHLQVWHCA*FACELVG 305 *S SW* *+C +V+ HSF+T IFCCA + P+ HR Q+ S+L A C LW S + + W + CA AC L G Subject 1268 *SWSW*H*SCACLHPQVYHRVHSFQTTIFCCAYLLFPQQWQQQHRIFVQRIASYLWAAYCLPAHLW*SKCAWPGRNQ*TW*IVTASGCALCACVLFG 1558
Range 5: 1254 to 1562 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.4 bits(108) | 0.0 | 36/103(35%) | 0/103(0%) | Plus/Plus |
Query 1 LQSWDPTSSHANQAQCQTCKCCQLRRILSQATWLDNHRRPCLQQVAERNEGLFC*GLRCSGKHGRGDTGQAQQKISVRNE*PVRNTRRRQP*QF*SHQDDDQI 309 L S P S+HA++AQ + + L LD R Q A+R E + C +RC H G+ AQQKI V NE* + T + Q +QD DQ+ Subject 1254 LLSIGPNSTHAHKAQPEAVTIHHVY*FLPGQAHLDYQRWAGKQYAAQRYEAILCTNIRCCCCHC*GNRR*AQQKIVV*NE*TL*YTCGCKQAQLQCYQDHDQV 1562
Isaria javanica chrysovirus 1 isolate IjCV 1 RNA dependent RNA polymerase (RdRp) gene, complete cds
Sequence ID: KX898416.1 Length: 3593 Number of Matches: 3
Range 1: 1669 to 1974 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
157.3 bits(337) | 0.0 | 64/102(63%) | 0/102(0%) | Plus/Plus |
Query 2 FSRGIQLAHMRIKHNAKPVNVASCGEFYRKRLGWITIGGLVYNKLPKGMKVFSAEVFDAVASTVEEIQGRHNKKSLFEMNDLYEILVGVNRDNFNLTKTMIK 307 F + AH+R+K + VNV S +FY +R W+T GGLV N LPKGMK FS+++FD VA+TVEEI+GRHNKKSLFEM++LY+IL GVN DNFN TKTMIK Subject 1669 FELALDAAHLRLKVTPRKVNVLSFLDFYERRRSWLTKGGLVNNTLPKGMKEFSSQIFDGVANTVEEIRGRHNKKSLFEMHELYDILAGVNGDNFNTTKTMIK 1974
Range 2: 1722 to 1976 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
97.3 bits(206) | 0.0 | 50/85(59%) | 0/85(0%) | Minus/Minus |
Query 55 YLIIVLVRLKLSRLTPTSISYRSFISNRDFLLCLPCISSTVLATASKTSAEKTFIPFGNLL*TRPPMVIQPSRLR*NSPQLATFT 309 YLIIV V LKLS TP SISY S ISN DFLLC P ISSTV AT SK +FIP G +L T PP V Q L * S + +T T Subject 1722 YLIIVFVVLKLSPFTPASISYSSCISNSDFLLCRPRISSTVFATPSKICELNSFIPLGRVLLTSPPFVSQLRLLS*KSKKDSTLT 1976
Range 3: 1759 to 1971 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
55.6 bits(115) | 0.0 | 26/71(37%) | 0/71(0%) | Minus/Minus |
Query 92 DHRLGEIKIVTVDADEYFVQVIHFEQRFFVVPALYLLDRACHCIEDLSRKDLHSFRQLVVDKASYGYPTKS 304 DHRL ++I+ V +Y +Q++HF+ R VVP YL + I++L K H+ + VVD ++ PT S Subject 1759 DHRLRSVEIIPVHTRQYIIQLMHFK*RLLVVPPPYLFYCVRNTIKNLRTKLFHTLGKGVVD*SALCEPTSS 1971
Isaria javanica chrysovirus 1 isolate IjCV 1 RNA dependent RNA polymerase (RdRp) gene, complete cds
Sequence ID: NC_033277.1 Length: 3593 Number of Matches: 3
Range 1: 1669 to 1974 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
157.3 bits(337) | 0.0 | 64/102(63%) | 0/102(0%) | Plus/Plus |
Query 2 FSRGIQLAHMRIKHNAKPVNVASCGEFYRKRLGWITIGGLVYNKLPKGMKVFSAEVFDAVASTVEEIQGRHNKKSLFEMNDLYEILVGVNRDNFNLTKTMIK 307 F + AH+R+K + VNV S +FY +R W+T GGLV N LPKGMK FS+++FD VA+TVEEI+GRHNKKSLFEM++LY+IL GVN DNFN TKTMIK Subject 1669 FELALDAAHLRLKVTPRKVNVLSFLDFYERRRSWLTKGGLVNNTLPKGMKEFSSQIFDGVANTVEEIRGRHNKKSLFEMHELYDILAGVNGDNFNTTKTMIK 1974
Range 2: 1722 to 1976 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
97.3 bits(206) | 0.0 | 50/85(59%) | 0/85(0%) | Minus/Minus |
Query 55 YLIIVLVRLKLSRLTPTSISYRSFISNRDFLLCLPCISSTVLATASKTSAEKTFIPFGNLL*TRPPMVIQPSRLR*NSPQLATFT 309 YLIIV V LKLS TP SISY S ISN DFLLC P ISSTV AT SK +FIP G +L T PP V Q L * S + +T T Subject 1722 YLIIVFVVLKLSPFTPASISYSSCISNSDFLLCRPRISSTVFATPSKICELNSFIPLGRVLLTSPPFVSQLRLLS*KSKKDSTLT 1976
Range 3: 1759 to 1971 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
55.6 bits(115) | 0.0 | 26/71(37%) | 0/71(0%) | Minus/Minus |
Query 92 DHRLGEIKIVTVDADEYFVQVIHFEQRFFVVPALYLLDRACHCIEDLSRKDLHSFRQLVVDKASYGYPTKS 304 DHRL ++I+ V +Y +Q++HF+ R VVP YL + I++L K H+ + VVD ++ PT S Subject 1759 DHRLRSVEIIPVHTRQYIIQLMHFK*RLLVVPPPYLFYCVRNTIKNLRTKLFHTLGKGVVD*SALCEPTSS 1971
Penicillium chrysogenum virus segment 1 RNA dependent RNA polymerase gene, complete cds
Sequence ID: AF296439.1 Length: 3562 Number of Matches: 3
Range 1: 1639 to 1944 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
141.3 bits(302) | 0.0 | 58/102(57%) | 0/102(0%) | Plus/Plus |
Query 2 FSRGIQLAHMRIKHNAKPVNVASCGEFYRKRLGWITIGGLVYNKLPKGMKVFSAEVFDAVASTVEEIQGRHNKKSLFEMNDLYEILVGVNRDNFNLTKTMIK 307 F ++ A++R+K KPVNV +FY +R W+T GGLVYNKLP MK F +VFDA+ +T EIQGRHNKKSLFE+ +L E+L G N +NFNLTKT IK Subject 1639 FITSVEEAYVRLKIEPKPVNVDGFIDFYHRRASWLTKGGLVYNKLPPEMKKFGGQVFDAIYNTCREIQGRHNKKSLFEVYELAEVLQGANENNFNLTKTQIK 1944
Range 2: 1656 to 1946 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
89.0 bits(188) | 0.0 | 52/97(54%) | 0/97(0%) | Minus/Minus |
Query 19 YLIIVLVRLKLSRLTPTSISYRSFISNRDFLLCLPCISSTVLATASKTSAEKTFIPFGNLL*TRPPMVIQPSRLR*NSPQLATFTGLALCLIRM*AS 309 YLI VLVRLKL L P + S S S DFLLC PCIS VL ASKT FI GNLL TRPP V Q + L * S +T TG L R AS Subject 1656 YLI*VLVRLKLFSLAPCNTSASS*TSKSDFLLCRPCISRHVL*IASKTWPPNFFISGGNLLYTRPPFVSQDALL**KSMNPSTLTGFGSILSRTYAS 1946
Range 3: 1663 to 1944 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.9 bits(107) | 0.0 | 27/94(29%) | 0/94(0%) | Minus/Minus |
Query 26 FDHRLGEIKIVTVDADEYFVQVIHFEQRFFVVPALYLLDRACHCIEDLSRKDLHSFRQLVVDKASYGYPTKSLAIKFAATGNIYRFGIVLDSHV 307 F+ +I+++ + A + + I+F++ F +VPALY C+++L+ K LH RQLV+ A+ P + I+ +I R HV Subject 1663 FNLSFSQIEVILIGAL*HLSKFINFKK*FLIVPALYFAACVIDCVKNLASKLLHLRRQLVIH*ATLREPRRPPVIEINEPVDIDRLWFYFKPHV 1944
Penicillium chrysogenum virus segment 1, complete genome
Sequence ID: NC_007539.1 Length: 3562 Number of Matches: 3
Range 1: 1639 to 1944 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
141.3 bits(302) | 0.0 | 58/102(57%) | 0/102(0%) | Plus/Plus |
Query 2 FSRGIQLAHMRIKHNAKPVNVASCGEFYRKRLGWITIGGLVYNKLPKGMKVFSAEVFDAVASTVEEIQGRHNKKSLFEMNDLYEILVGVNRDNFNLTKTMIK 307 F ++ A++R+K KPVNV +FY +R W+T GGLVYNKLP MK F +VFDA+ +T EIQGRHNKKSLFE+ +L E+L G N +NFNLTKT IK Subject 1639 FITSVEEAYVRLKIEPKPVNVDGFIDFYHRRASWLTKGGLVYNKLPPEMKKFGGQVFDAIYNTCREIQGRHNKKSLFEVYELAEVLQGANENNFNLTKTQIK 1944
Range 2: 1656 to 1946 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
89.0 bits(188) | 0.0 | 52/97(54%) | 0/97(0%) | Minus/Minus |
Query 19 YLIIVLVRLKLSRLTPTSISYRSFISNRDFLLCLPCISSTVLATASKTSAEKTFIPFGNLL*TRPPMVIQPSRLR*NSPQLATFTGLALCLIRM*AS 309 YLI VLVRLKL L P + S S S DFLLC PCIS VL ASKT FI GNLL TRPP V Q + L * S +T TG L R AS Subject 1656 YLI*VLVRLKLFSLAPCNTSASS*TSKSDFLLCRPCISRHVL*IASKTWPPNFFISGGNLLYTRPPFVSQDALL**KSMNPSTLTGFGSILSRTYAS 1946
Range 3: 1663 to 1944 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.9 bits(107) | 0.0 | 27/94(29%) | 0/94(0%) | Minus/Minus |
Query 26 FDHRLGEIKIVTVDADEYFVQVIHFEQRFFVVPALYLLDRACHCIEDLSRKDLHSFRQLVVDKASYGYPTKSLAIKFAATGNIYRFGIVLDSHV 307 F+ +I+++ + A + + I+F++ F +VPALY C+++L+ K LH RQLV+ A+ P + I+ +I R HV Subject 1663 FNLSFSQIEVILIGAL*HLSKFINFKK*FLIVPALYFAACVIDCVKNLASKLLHLRRQLVIH*ATLREPRRPPVIEINEPVDIDRLWFYFKPHV 1944