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Queries

Nucleotide Sequence (426 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
43
86
129
172
215
258
301
344
387
426

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
326.9 1812.5 26% 9.033e-88 95% GQ352632.1
326.4 1811.1 26% 1.241e-87 96% KJ174518.1
326.4 1811.1 26% 1.241e-87 96% KX756668.1
325.0 1804.3 26% 3.218e-87 95% KX701860.1
322.3 1778.6 26% 2.164e-86 94% EU259806.1

Alignments

Grapevine leafroll associated virus 3 isolate 623, complete genome

Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 8

Range 1: 10330 to 10752 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
326.9 bits(707) 0.0 138/141(98%) 0/141(0%) Plus/Minus
Query        1  YQLQEYNH*PQMGKSRLC*KWFQNLYLLPYLTKRGITLS*DLY*WWSFAVTSGRQT**PATE*SQRRNRPPTTVLPV*NHP*TTTLTSI*NHDITFAQHEDHSRGAFPYFSFKANLFYSNLARKPIYVATKPRLAPINALN  423
                YQLQEYNH*PQMGKSRLC*KWFQNLYLLPYLTKRGITLS*DLY*WWSFAVTSGRQT**PATE*SQRRNRPPTTVLPV*NHP*TTTLTSI*NH+ITFAQHEDHSRGAFPYFSFKANLFY NLARKPIYVATKP LAPINALN
Subject  10330  YQLQEYNH*PQMGKSRLC*KWFQNLYLLPYLTKRGITLS*DLY*WWSFAVTSGRQT**PATE*SQRRNRPPTTVLPV*NHP*TTTLTSI*NHNITFAQHEDHSRGAFPYFSFKANLFYPNLARKPIYVATKPHLAPINALN  10752

Range 2: 10331 to 10750 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
318.6 bits(689) 0.0 136/140(97%) 0/140(0%) Plus/Minus
Query        3  PATGVQPLTPDGEKQIVLKVVPKSIPTSISN*KRNHTVLRPVLMVELCCNLGTTNVITSNRIITKTKSTTNNSIACLKSSINNYAYFNIKSRYYLRSARRSFTWRLPLFLF*GELVLFQSRTKTYLCRY*TSPSADKRTQ  422
                PATGVQPLTPDGEKQIVLKVVPKSIPTSISN*KRNHTVLRPVLMVELCCNLGTTNVITSNRIITKTKSTTNNSIACLKSSINNYAYFNIKS+Y+LRSARRSF WRLPLFLF*GELVL QSRTKTYLCRY*TSPSADKRTQ
Subject  10331  PATGVQPLTPDGEKQIVLKVVPKSIPTSISN*KRNHTVLRPVLMVELCCNLGTTNVITSNRIITKTKSTTNNSIACLKSSINNYAYFNIKSQYHLRSARRSFAWRLPLFLF*GELVLSQSRTKTYLCRY*TSPSADKRTQ  10750

Range 3: 10329 to 10751 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
310.8 bits(672) 0.0 138/141(98%) 0/141(0%) Plus/Minus
Query        2  TSYRSTTTDPRWGKADCAESGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRXXXXXXXHKDEIDHQQQYCLFKIIHKQLRLLQYKITILPSLSTKIIHVAPSPISLLRRTCSIPISHENLFMSLLNLA*RR*THST  424
                TSYRSTTTDPRWGKADCAESGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRNNQQQNNHKDEIDHQQQYCLFKIIHKQLRLLQYKITI PSLSTKII VAPSPISLLRRTCSIPISHENLFMSLLNL *RR*THST
Subject  10329  TSYRSTTTDPRWGKADCAESGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRNNQQQNNHKDEIDHQQQYCLFKIIHKQLRLLQYKITISPSLSTKIIRVAPSPISLLRRTCSIPISHENLFMSLLNLT*RR*THST  10751

Range 4: 10330 to 10728 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
307.6 bits(665) 0.0 130/133(98%) 0/133(0%) Minus/Plus
Query       25  VECVYRR*ARFSSDINRFSCEIGIEQVRLKREIGEGAT*MIFVLSEGNIVILY*SKRSCLWMILNRQYCCWWSISSL*LFCCWLLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPLSAQSAFPHLGS  423
                VECVYRR* RFSSDINRFSCEIGIEQVRLKREIGEGAT MIFVLSEG+IVILY*SKRSCLWMILNRQYCCWWSISSL*LFCCWLLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPLSAQSAFPHLGS
Subject  10330  VECVYRR*VRFSSDINRFSCEIGIEQVRLKREIGEGATRMIFVLSEGDIVILY*SKRSCLWMILNRQYCCWWSISSL*LFCCWLLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPLSAQSAFPHLGS  10728

Range 5: 10547 to 10750 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
181.1 bits(389) 0.0 68/68(100%) 0/68(0%) Minus/Plus
Query        3  RFRLCDYSVAGYYVCRPEVTAKLHH*YRS*DSVIPLLVRYGSRYRFWNHFQHNLLFPIWGQWLYSCSW  206
                RFRLCDYSVAGYYVCRPEVTAKLHH*YRS*DSVIPLLVRYGSRYRFWNHFQHNLLFPIWGQWLYSCSW
Subject  10547  RFRLCDYSVAGYYVCRPEVTAKLHH*YRS*DSVIPLLVRYGSRYRFWNHFQHNLLFPIWGQWLYSCSW  10750

Range 6: 10332 to 10529 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
137.2 bits(293) 0.0 63/66(95%) 0/66(0%) Minus/Plus
Query      224  *VRLSALGEV**RHK*VFVRDWNRTSSP*KRNRGRRHVNDLRAERR*YRDFILK*A*LFMDDFKQA  421
                *VRLSALGEV**RHK*VFVRDW+RTSSP*KRNRGRRH NDLRAERR*Y DFILK*A*LFMDDFKQA
Subject  10332  *VRLSALGEV**RHK*VFVRDWDRTSSP*KRNRGRRHANDLRAERR*YCDFILK*A*LFMDDFKQA  10529

Range 7: 10596 to 10751 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.0 bits(262) 0.0 52/52(100%) 0/52(0%) Minus/Plus
Query        2  PRLQQSSTINTGLRTV*FLF*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAG  157
                PRLQQSSTINTGLRTV*FLF*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAG
Subject  10596  PRLQQSSTINTGLRTV*FLF*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAG  10751

Range 8: 10331 to 10498 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
107.4 bits(228) 0.0 53/56(95%) 0/56(0%) Minus/Plus
Query      255  LSAFIGARRGLVAT*IGFRARLE*NKFALKEK*GKAPRE*SSC*AKVIS*FYIEVS  422
                LSAFIGAR GLVAT*IGFRARL *NKFALKEK*GKAPRE*SSC*AKVI *FYIEVS
Subject  10331  LSAFIGAR*GLVAT*IGFRARLG*NKFALKEK*GKAPRE*SSC*AKVIL*FYIEVS  10498

Grapevine leafroll associated virus 3, complete genome

Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 8

Range 1: 10330 to 10752 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
326.4 bits(706) 0.0 138/141(98%) 0/141(0%) Plus/Minus
Query        1  YQLQEYNH*PQMGKSRLC*KWFQNLYLLPYLTKRGITLS*DLY*WWSFAVTSGRQT**PATE*SQRRNRPPTTVLPV*NHP*TTTLTSI*NHDITFAQHEDHSRGAFPYFSFKANLFYSNLARKPIYVATKPRLAPINALN  423
                YQLQEYNH*PQMGKSRLC*KWFQNLYLLPYLTKRGITLS*DLY*WWSFAVTSGRQT**PATE*SQRRNRPPTTVLPV*NHP* TTLTSI*NHDITFAQHEDHSRGAFPYFSFKANLFY NLARKPIYVATKP LAPINALN
Subject  10330  YQLQEYNH*PQMGKSRLC*KWFQNLYLLPYLTKRGITLS*DLY*WWSFAVTSGRQT**PATE*SQRRNRPPTTVLPV*NHP*ITTLTSI*NHDITFAQHEDHSRGAFPYFSFKANLFYPNLARKPIYVATKPHLAPINALN  10752

Range 2: 10331 to 10750 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
320.4 bits(693) 0.0 137/140(98%) 0/140(0%) Plus/Minus
Query        3  PATGVQPLTPDGEKQIVLKVVPKSIPTSISN*KRNHTVLRPVLMVELCCNLGTTNVITSNRIITKTKSTTNNSIACLKSSINNYAYFNIKSRYYLRSARRSFTWRLPLFLF*GELVLFQSRTKTYLCRY*TSPSADKRTQ  422
                PATGVQPLTPDGEKQIVLKVVPKSIPTSISN*KRNHTVLRPVLMVELCCNLGTTNVITSNRIITKTKSTTNNSIACLKSSINNYAYFNIKSRY+LRSARRSF WRLPLFLF*GELVL QSRTKTYLCRY*TSPSADKRTQ
Subject  10331  PATGVQPLTPDGEKQIVLKVVPKSIPTSISN*KRNHTVLRPVLMVELCCNLGTTNVITSNRIITKTKSTTNNSIACLKSSINNYAYFNIKSRYHLRSARRSFAWRLPLFLF*GELVLSQSRTKTYLCRY*TSPSADKRTQ  10750

Range 3: 10329 to 10751 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
306.7 bits(663) 0.0 137/141(97%) 0/141(0%) Plus/Minus
Query        2  TSYRSTTTDPRWGKADCAESGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRXXXXXXXHKDEIDHQQQYCLFKIIHKQLRLLQYKITILPSLSTKIIHVAPSPISLLRRTCSIPISHENLFMSLLNLA*RR*THST  424
                TSYRSTTTDPRWGKADCAESGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRNNQQQNNHKDEIDHQQQYCLFKIIHK LRLLQYKITI PSLSTKII VAPSPISLLRRTCSIPISHENLFMSLLNL *RR*THST
Subject  10329  TSYRSTTTDPRWGKADCAESGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRNNQQQNNHKDEIDHQQQYCLFKIIHK*LRLLQYKITISPSLSTKIIRVAPSPISLLRRTCSIPISHENLFMSLLNLT*RR*THST  10751

Range 4: 10330 to 10728 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
302.6 bits(654) 0.0 129/133(97%) 0/133(0%) Minus/Plus
Query       25  VECVYRR*ARFSSDINRFSCEIGIEQVRLKREIGEGAT*MIFVLSEGNIVILY*SKRSCLWMILNRQYCCWWSISSL*LFCCWLLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPLSAQSAFPHLGS  423
                VECVYRR* RFSSDINRFSCEIGIEQVRLKREIGEGAT MIFVLSEG+IVILY*SKRS LWMILNRQYCCWWSISSL*LFCCWLLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPLSAQSAFPHLGS
Subject  10330  VECVYRR*VRFSSDINRFSCEIGIEQVRLKREIGEGATRMIFVLSEGDIVILY*SKRSYLWMILNRQYCCWWSISSL*LFCCWLLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPLSAQSAFPHLGS  10728

Range 5: 10547 to 10750 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
181.1 bits(389) 0.0 68/68(100%) 0/68(0%) Minus/Plus
Query        3  RFRLCDYSVAGYYVCRPEVTAKLHH*YRS*DSVIPLLVRYGSRYRFWNHFQHNLLFPIWGQWLYSCSW  206
                RFRLCDYSVAGYYVCRPEVTAKLHH*YRS*DSVIPLLVRYGSRYRFWNHFQHNLLFPIWGQWLYSCSW
Subject  10547  RFRLCDYSVAGYYVCRPEVTAKLHH*YRS*DSVIPLLVRYGSRYRFWNHFQHNLLFPIWGQWLYSCSW  10750

Range 6: 10332 to 10529 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
140.8 bits(301) 0.0 64/66(97%) 0/66(0%) Minus/Plus
Query      224  *VRLSALGEV**RHK*VFVRDWNRTSSP*KRNRGRRHVNDLRAERR*YRDFILK*A*LFMDDFKQA  421
                *VRLSALGEV**RHK*VFVRDW+RTSSP*KRNRGRRH NDLRAERR*YRDFILK*A*LFMDDFKQA
Subject  10332  *VRLSALGEV**RHK*VFVRDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*A*LFMDDFKQA  10529

Range 7: 10596 to 10751 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.0 bits(262) 0.0 52/52(100%) 0/52(0%) Minus/Plus
Query        2  PRLQQSSTINTGLRTV*FLF*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAG  157
                PRLQQSSTINTGLRTV*FLF*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAG
Subject  10596  PRLQQSSTINTGLRTV*FLF*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAG  10751

Range 8: 10331 to 10498 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
110.1 bits(234) 0.0 54/56(96%) 0/56(0%) Minus/Plus
Query      255  LSAFIGARRGLVAT*IGFRARLE*NKFALKEK*GKAPRE*SSC*AKVIS*FYIEVS  422
                LSAFIGAR GLVAT*IGFRARL *NKFALKEK*GKAPRE*SSC*AKVIS*FYIEVS
Subject  10331  LSAFIGAR*GLVAT*IGFRARLG*NKFALKEK*GKAPRE*SSC*AKVIS*FYIEVS  10498

Grapevine leafroll associated virus 3 isolate TC BR, complete genome

Sequence ID: KX756668.1 Length: 18498 Number of Matches: 8

Range 1: 10330 to 10752 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
326.4 bits(706) 0.0 138/141(98%) 0/141(0%) Plus/Minus
Query        1  YQLQEYNH*PQMGKSRLC*KWFQNLYLLPYLTKRGITLS*DLY*WWSFAVTSGRQT**PATE*SQRRNRPPTTVLPV*NHP*TTTLTSI*NHDITFAQHEDHSRGAFPYFSFKANLFYSNLARKPIYVATKPRLAPINALN  423
                YQLQEYNH*PQMGKSRLC*KWFQNLYLLPYLTKRGITLS*DLY*WWSFAVTSGRQT**PATE*SQRRNRPPTTVLPV*NHP* TTLTSI*NHDITFAQHEDHSRGAFPYFSFKANLFY NLARKPIYVATKP LAPINALN
Subject  10330  YQLQEYNH*PQMGKSRLC*KWFQNLYLLPYLTKRGITLS*DLY*WWSFAVTSGRQT**PATE*SQRRNRPPTTVLPV*NHP*ITTLTSI*NHDITFAQHEDHSRGAFPYFSFKANLFYPNLARKPIYVATKPHLAPINALN  10752

Range 2: 10331 to 10750 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
320.4 bits(693) 0.0 137/140(98%) 0/140(0%) Plus/Minus
Query        3  PATGVQPLTPDGEKQIVLKVVPKSIPTSISN*KRNHTVLRPVLMVELCCNLGTTNVITSNRIITKTKSTTNNSIACLKSSINNYAYFNIKSRYYLRSARRSFTWRLPLFLF*GELVLFQSRTKTYLCRY*TSPSADKRTQ  422
                PATGVQPLTPDGEKQIVLKVVPKSIPTSISN*KRNHTVLRPVLMVELCCNLGTTNVITSNRIITKTKSTTNNSIACLKSSINNYAYFNIKSRY+LRSARRSF WRLPLFLF*GELVL QSRTKTYLCRY*TSPSADKRTQ
Subject  10331  PATGVQPLTPDGEKQIVLKVVPKSIPTSISN*KRNHTVLRPVLMVELCCNLGTTNVITSNRIITKTKSTTNNSIACLKSSINNYAYFNIKSRYHLRSARRSFAWRLPLFLF*GELVLSQSRTKTYLCRY*TSPSADKRTQ  10750

Range 3: 10329 to 10751 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
306.7 bits(663) 0.0 137/141(97%) 0/141(0%) Plus/Minus
Query        2  TSYRSTTTDPRWGKADCAESGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRXXXXXXXHKDEIDHQQQYCLFKIIHKQLRLLQYKITILPSLSTKIIHVAPSPISLLRRTCSIPISHENLFMSLLNLA*RR*THST  424
                TSYRSTTTDPRWGKADCAESGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRNNQQQNNHKDEIDHQQQYCLFKIIHK LRLLQYKITI PSLSTKII VAPSPISLLRRTCSIPISHENLFMSLLNL *RR*THST
Subject  10329  TSYRSTTTDPRWGKADCAESGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRNNQQQNNHKDEIDHQQQYCLFKIIHK*LRLLQYKITISPSLSTKIIRVAPSPISLLRRTCSIPISHENLFMSLLNLT*RR*THST  10751

Range 4: 10330 to 10728 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
302.6 bits(654) 0.0 129/133(97%) 0/133(0%) Minus/Plus
Query       25  VECVYRR*ARFSSDINRFSCEIGIEQVRLKREIGEGAT*MIFVLSEGNIVILY*SKRSCLWMILNRQYCCWWSISSL*LFCCWLLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPLSAQSAFPHLGS  423
                VECVYRR* RFSSDINRFSCEIGIEQVRLKREIGEGAT MIFVLSEG+IVILY*SKRS LWMILNRQYCCWWSISSL*LFCCWLLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPLSAQSAFPHLGS
Subject  10330  VECVYRR*VRFSSDINRFSCEIGIEQVRLKREIGEGATRMIFVLSEGDIVILY*SKRSYLWMILNRQYCCWWSISSL*LFCCWLLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPLSAQSAFPHLGS  10728

Range 5: 10547 to 10750 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
181.1 bits(389) 0.0 68/68(100%) 0/68(0%) Minus/Plus
Query        3  RFRLCDYSVAGYYVCRPEVTAKLHH*YRS*DSVIPLLVRYGSRYRFWNHFQHNLLFPIWGQWLYSCSW  206
                RFRLCDYSVAGYYVCRPEVTAKLHH*YRS*DSVIPLLVRYGSRYRFWNHFQHNLLFPIWGQWLYSCSW
Subject  10547  RFRLCDYSVAGYYVCRPEVTAKLHH*YRS*DSVIPLLVRYGSRYRFWNHFQHNLLFPIWGQWLYSCSW  10750

Range 6: 10332 to 10529 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
140.8 bits(301) 0.0 64/66(97%) 0/66(0%) Minus/Plus
Query      224  *VRLSALGEV**RHK*VFVRDWNRTSSP*KRNRGRRHVNDLRAERR*YRDFILK*A*LFMDDFKQA  421
                *VRLSALGEV**RHK*VFVRDW+RTSSP*KRNRGRRH NDLRAERR*YRDFILK*A*LFMDDFKQA
Subject  10332  *VRLSALGEV**RHK*VFVRDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*A*LFMDDFKQA  10529

Range 7: 10596 to 10751 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.0 bits(262) 0.0 52/52(100%) 0/52(0%) Minus/Plus
Query        2  PRLQQSSTINTGLRTV*FLF*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAG  157
                PRLQQSSTINTGLRTV*FLF*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAG
Subject  10596  PRLQQSSTINTGLRTV*FLF*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAG  10751

Range 8: 10331 to 10498 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
110.1 bits(234) 0.0 54/56(96%) 0/56(0%) Minus/Plus
Query      255  LSAFIGARRGLVAT*IGFRARLE*NKFALKEK*GKAPRE*SSC*AKVIS*FYIEVS  422
                LSAFIGAR GLVAT*IGFRARL *NKFALKEK*GKAPRE*SSC*AKVIS*FYIEVS
Subject  10331  LSAFIGAR*GLVAT*IGFRARLG*NKFALKEK*GKAPRE*SSC*AKVIS*FYIEVS  10498

Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome

Sequence ID: KX701860.1 Length: 18020 Number of Matches: 8

Range 1: 9848 to 10270 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
325.0 bits(703) 0.0 137/141(97%) 0/141(0%) Plus/Minus
Query        1  YQLQEYNH*PQMGKSRLC*KWFQNLYLLPYLTKRGITLS*DLY*WWSFAVTSGRQT**PATE*SQRRNRPPTTVLPV*NHP*TTTLTSI*NHDITFAQHEDHSRGAFPYFSFKANLFYSNLARKPIYVATKPRLAPINALN  423
                YQLQEYNH*PQMGKSRLC*KWFQNLYLLPYLTKRGITLS*DLY*WW FAVTSGRQT**PATE*SQRRNRPPTTVLP *NHP*TTTLTSI*NHDITFAQHEDHSRGAFPYFSFKANLFY NLARKPIYVATKP LAPINALN
Subject   9848  YQLQEYNH*PQMGKSRLC*KWFQNLYLLPYLTKRGITLS*DLY*WWCFAVTSGRQT**PATE*SQRRNRPPTTVLPA*NHP*TTTLTSI*NHDITFAQHEDHSRGAFPYFSFKANLFYPNLARKPIYVATKPHLAPINALN  10270

Range 2: 9849 to 10268 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
316.8 bits(685) 0.0 136/140(97%) 0/140(0%) Plus/Minus
Query        3  PATGVQPLTPDGEKQIVLKVVPKSIPTSISN*KRNHTVLRPVLMVELCCNLGTTNVITSNRIITKTKSTTNNSIACLKSSINNYAYFNIKSRYYLRSARRSFTWRLPLFLF*GELVLFQSRTKTYLCRY*TSPSADKRTQ  422
                PATGVQPLTPDGEKQIVLKVVPKSIPTSISN*KRNHTVLRPVLMV LCCNLGTTNVITSNRIITKTKSTTNNSIACLKSSINNYAYFNIKSRYYLRSARRS  WRLPLFLF*GELVL QSRTKTYLCRY*TSPSADKRTQ
Subject   9849  PATGVQPLTPDGEKQIVLKVVPKSIPTSISN*KRNHTVLRPVLMVVLCCNLGTTNVITSNRIITKTKSTTNNSIACLKSSINNYAYFNIKSRYYLRSARRSLAWRLPLFLF*GELVLSQSRTKTYLCRY*TSPSADKRTQ  10268

Range 3: 9847 to 10269 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
308.5 bits(667) 0.0 137/141(97%) 0/141(0%) Plus/Minus
Query        2  TSYRSTTTDPRWGKADCAESGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRXXXXXXXHKDEIDHQQQYCLFKIIHKQLRLLQYKITILPSLSTKIIHVAPSPISLLRRTCSIPISHENLFMSLLNLA*RR*THST  424
                TSYRSTTTDPRWGKADCAESGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRNNQQQNNHKDEIDHQQQYCL KIIHKQLRLLQYKITILPSLSTKI  VAPSPISLLRRTCSIPISHENLFMSLLNL *RR*THST
Subject   9847  TSYRSTTTDPRWGKADCAESGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRNNQQQNNHKDEIDHQQQYCLLKIIHKQLRLLQYKITILPSLSTKITRVAPSPISLLRRTCSIPISHENLFMSLLNLT*RR*THST  10269

Range 4: 9848 to 10246 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
305.8 bits(661) 0.0 129/133(97%) 0/133(0%) Minus/Plus
Query       25  VECVYRR*ARFSSDINRFSCEIGIEQVRLKREIGEGAT*MIFVLSEGNIVILY*SKRSCLWMILNRQYCCWWSISSL*LFCCWLLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPLSAQSAFPHLGS  423
                VECVYRR* RFSSDINRFSCEIGIEQVRLKREIGEGAT +IFVLSEGNIVILY*SKRSCLWMIL+RQYCCWWSISSL*LFCCWLLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPLSAQSAFPHLGS
Subject   9848  VECVYRR*VRFSSDINRFSCEIGIEQVRLKREIGEGATRVIFVLSEGNIVILY*SKRSCLWMILSRQYCCWWSISSL*LFCCWLLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPLSAQSAFPHLGS  10246

Range 5: 10065 to 10268 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
177.9 bits(382) 0.0 67/68(99%) 0/68(0%) Minus/Plus
Query        3  RFRLCDYSVAGYYVCRPEVTAKLHH*YRS*DSVIPLLVRYGSRYRFWNHFQHNLLFPIWGQWLYSCSW  206
                RFRLCDYSVAGYYVCRPEVTAK HH*YRS*DSVIPLLVRYGSRYRFWNHFQHNLLFPIWGQWLYSCSW
Subject  10065  RFRLCDYSVAGYYVCRPEVTAKHHH*YRS*DSVIPLLVRYGSRYRFWNHFQHNLLFPIWGQWLYSCSW  10268

Range 6: 9850 to 10047 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
138.5 bits(296) 0.0 63/66(95%) 0/66(0%) Minus/Plus
Query      224  *VRLSALGEV**RHK*VFVRDWNRTSSP*KRNRGRRHVNDLRAERR*YRDFILK*A*LFMDDFKQA  421
                *VRLSALGEV**RHK*VFVRDW+RTSSP*KRNRGRRH +DLRAERR*YRDFILK*A*LFMDDFKQA
Subject   9850  *VRLSALGEV**RHK*VFVRDWDRTSSP*KRNRGRRHASDLRAERR*YRDFILK*A*LFMDDFKQA  10047

Range 7: 10114 to 10269 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
121.6 bits(259) 0.0 51/52(98%) 0/52(0%) Minus/Plus
Query        2  PRLQQSSTINTGLRTV*FLF*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAG  157
                PRLQQS+TINTGLRTV*FLF*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAG
Subject  10114  PRLQQSTTINTGLRTV*FLF*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAG  10269

Range 8: 9849 to 10016 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
110.1 bits(234) 0.0 54/56(96%) 0/56(0%) Minus/Plus
Query      255  LSAFIGARRGLVAT*IGFRARLE*NKFALKEK*GKAPRE*SSC*AKVIS*FYIEVS  422
                LSAFIGAR GLVAT*IGFRARL *NKFALKEK*GKAPRE*SSC*AKVIS*FYIEVS
Subject   9849  LSAFIGAR*GLVAT*IGFRARLG*NKFALKEK*GKAPRE*SSC*AKVIS*FYIEVS  10016

Grapevine leafroll associated virus 3 isolate GP18, complete genome

Sequence ID: EU259806.1 Length: 18498 Number of Matches: 8

Range 1: 10330 to 10752 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
322.3 bits(697) 0.0 136/141(96%) 0/141(0%) Plus/Minus
Query        1  YQLQEYNH*PQMGKSRLC*KWFQNLYLLPYLTKRGITLS*DLY*WWSFAVTSGRQT**PATE*SQRRNRPPTTVLPV*NHP*TTTLTSI*NHDITFAQHEDHSRGAFPYFSFKANLFYSNLARKPIYVATKPRLAPINALN  423
                YQLQ YNH*PQMGKSRLC*KWFQNLYLLPYLTKRGITLS*DLY*WWSFAVTSGRQT**PATE*SQRRNRPPTTVLPV*NHP* TTLTSI*NHDITFAQHEDHSRGAFPYFSFKAN+FY NLARKPIYVATKP LAPINALN
Subject  10330  YQLQGYNH*PQMGKSRLC*KWFQNLYLLPYLTKRGITLS*DLY*WWSFAVTSGRQT**PATE*SQRRNRPPTTVLPV*NHP*ITTLTSI*NHDITFAQHEDHSRGAFPYFSFKANMFYPNLARKPIYVATKPHLAPINALN  10752

Range 2: 10331 to 10750 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
314.5 bits(680) 0.0 135/140(96%) 0/140(0%) Plus/Minus
Query        3  PATGVQPLTPDGEKQIVLKVVPKSIPTSISN*KRNHTVLRPVLMVELCCNLGTTNVITSNRIITKTKSTTNNSIACLKSSINNYAYFNIKSRYYLRSARRSFTWRLPLFLF*GELVLFQSRTKTYLCRY*TSPSADKRTQ  422
                PATGVQPLTPDGEKQIVLKVVPKSIPTSISN*KRNHTVLRPVLMVELCCNLGTTNVITSNRIITKTKSTTNNSIACLKSSINNYAYFNIKSRY+LRSARRSF WRLPLFLF*GE VL QS TKTYLCRY*TSPSADKRTQ
Subject  10331  PATGVQPLTPDGEKQIVLKVVPKSIPTSISN*KRNHTVLRPVLMVELCCNLGTTNVITSNRIITKTKSTTNNSIACLKSSINNYAYFNIKSRYHLRSARRSFAWRLPLFLF*GEHVLSQSSTKTYLCRY*TSPSADKRTQ  10750

Range 3: 10329 to 10751 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
301.2 bits(651) 0.0 135/141(96%) 0/141(0%) Plus/Minus
Query        2  TSYRSTTTDPRWGKADCAESGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRXXXXXXXHKDEIDHQQQYCLFKIIHKQLRLLQYKITILPSLSTKIIHVAPSPISLLRRTCSIPISHENLFMSLLNLA*RR*THST  424
                TSYR TTTDPRWGKADCAESGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRNNQQQNNHKDEIDHQQQYCLFKIIHK LRLLQYKITI PSLSTKII VAPSPISLLRRTCSIPI HENLFMSLLNL *RR*THST
Subject  10329  TSYRGTTTDPRWGKADCAESGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRNNQQQNNHKDEIDHQQQYCLFKIIHK*LRLLQYKITISPSLSTKIIRVAPSPISLLRRTCSIPI*HENLFMSLLNLT*RR*THST  10751

Range 4: 10330 to 10728 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
296.2 bits(640) 0.0 127/133(95%) 0/133(0%) Minus/Plus
Query       25  VECVYRR*ARFSSDINRFSCEIGIEQVRLKREIGEGAT*MIFVLSEGNIVILY*SKRSCLWMILNRQYCCWWSISSL*LFCCWLLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPLSAQSAFPHLGS  423
                VECVYRR* RFSSDINRFSC IGIE VRLKREIGEGAT MIFVLSEG+IVILY*SKRS LWMILNRQYCCWWSISSL*LFCCWLLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPLSAQSAFPHLGS
Subject  10330  VECVYRR*VRFSSDINRFSC*IGIEHVRLKREIGEGATRMIFVLSEGDIVILY*SKRSYLWMILNRQYCCWWSISSL*LFCCWLLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPLSAQSAFPHLGS  10728

Range 5: 10547 to 10750 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
178.9 bits(384) 0.0 67/68(99%) 0/68(0%) Minus/Plus
Query        3  RFRLCDYSVAGYYVCRPEVTAKLHH*YRS*DSVIPLLVRYGSRYRFWNHFQHNLLFPIWGQWLYSCSW  206
                RFRLCDYSVAGYYVCRPEVTAKLHH*YRS*DSVIPLLVRYGSRYRFWNHFQHNLLFPIWGQWLY CSW
Subject  10547  RFRLCDYSVAGYYVCRPEVTAKLHH*YRS*DSVIPLLVRYGSRYRFWNHFQHNLLFPIWGQWLYPCSW  10750

Range 6: 10332 to 10529 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
135.3 bits(289) 0.0 62/66(94%) 0/66(0%) Minus/Plus
Query      224  *VRLSALGEV**RHK*VFVRDWNRTSSP*KRNRGRRHVNDLRAERR*YRDFILK*A*LFMDDFKQA  421
                *VRLSALGEV**RHK*VFV DW+RT SP*KRNRGRRH NDLRAERR*YRDFILK*A*LFMDDFKQA
Subject  10332  *VRLSALGEV**RHK*VFVLDWDRTCSP*KRNRGRRHANDLRAERR*YRDFILK*A*LFMDDFKQA  10529

Range 7: 10596 to 10751 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.0 bits(262) 0.0 52/52(100%) 0/52(0%) Minus/Plus
Query        2  PRLQQSSTINTGLRTV*FLF*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAG  157
                PRLQQSSTINTGLRTV*FLF*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAG
Subject  10596  PRLQQSSTINTGLRTV*FLF*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAG  10751

Range 8: 10331 to 10498 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
107.4 bits(228) 0.0 53/56(95%) 0/56(0%) Minus/Plus
Query      255  LSAFIGARRGLVAT*IGFRARLE*NKFALKEK*GKAPRE*SSC*AKVIS*FYIEVS  422
                LSAFIGAR GLVAT*IGFRARL *N FALKEK*GKAPRE*SSC*AKVIS*FYIEVS
Subject  10331  LSAFIGAR*GLVAT*IGFRARLG*NMFALKEK*GKAPRE*SSC*AKVIS*FYIEVS  10498

Nucleotide Sequence (243 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
25
50
75
100
125
150
175
200
225
243

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
195.8 1129.8 34% 8.521e-49 100% JX559645.1
195.8 1129.8 34% 8.521e-49 100% GU983863.1
195.8 1129.8 34% 8.521e-49 100% EU344893.1
194.0 1122.0 34% 3.035e-48 99% KX756669.1
192.6 1118.4 34% 7.871e-48 99% GQ352631.1

Alignments

Grapevine leafroll associated virus 3 isolate 3138 07, complete genome

Sequence ID: JX559645.1 Length: 18498 Number of Matches: 6

Range 1: 12045 to 12284 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
195.8 bits(421) 0.0 80/80(100%) 0/80(0%) Plus/Minus
Query        2  GGF*KIFFYP*IREPLIFVTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPRFIDQ*IQYVCCPGYQIFILYFLTINDNRH  241
                GGF*KIFFYP*IREPLIFVTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPRFIDQ*IQYVCCPGYQIFILYFLTINDNRH
Subject  12045  GGF*KIFFYP*IREPLIFVTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPRFIDQ*IQYVCCPGYQIFILYFLTINDNRH  12284

Range 2: 12043 to 12285 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
192.6 bits(414) 0.0 81/81(100%) 0/81(0%) Plus/Minus
Query        1  RRILKNFLLSLNPRTPYLCYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTP  243
                RRILKNFLLSLNPRTPYLCYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTP
Subject  12043  RRILKNFLLSLNPRTPYLCYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTP  12285

Range 3: 12043 to 12285 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
189.4 bits(407) 0.0 81/81(100%) 0/81(0%) Minus/Plus
Query        1  RCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VTKIRGSRI*G*KKIF*NPP  243
                RCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VTKIRGSRI*G*KKIF*NPP
Subject  12043  RCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VTKIRGSRI*G*KKIF*NPP  12285

Range 4: 12044 to 12283 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
188.5 bits(405) 0.0 80/80(100%) 0/80(0%) Minus/Plus
Query        3  GVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*QR*GVLGFKDRRKFFKIR  242
                GVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*QR*GVLGFKDRRKFFKIR
Subject  12044  GVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*QR*GVLGFKDRRKFFKIR  12283

Range 5: 12045 to 12284 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
182.9 bits(401) 0.0 80/80(100%) 0/80(0%) Minus/Plus
Query        2  VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSNKDKGFSDLRIEENFLKSA  241
                VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSNKDKGFSDLRIEENFLKSA
Subject  12045  VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSNKDKGFSDLRIEENFLKSA  12284

Range 6: 12044 to 12283 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
180.7 bits(388) 0.0 80/80(100%) 0/80(0%) Plus/Minus
Query        3  ADFKKFSSILKSENPLSLLLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDT  242
                ADFKKFSSILKSENPLSLLLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDT
Subject  12044  ADFKKFSSILKSENPLSLLLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDT  12283

Grapevine leafroll associated virus 3 isolate WA MR, complete genome

Sequence ID: GU983863.1 Length: 18498 Number of Matches: 6

Range 1: 12045 to 12284 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
195.8 bits(421) 0.0 80/80(100%) 0/80(0%) Plus/Minus
Query        2  GGF*KIFFYP*IREPLIFVTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPRFIDQ*IQYVCCPGYQIFILYFLTINDNRH  241
                GGF*KIFFYP*IREPLIFVTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPRFIDQ*IQYVCCPGYQIFILYFLTINDNRH
Subject  12045  GGF*KIFFYP*IREPLIFVTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPRFIDQ*IQYVCCPGYQIFILYFLTINDNRH  12284

Range 2: 12043 to 12285 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
192.6 bits(414) 0.0 81/81(100%) 0/81(0%) Plus/Minus
Query        1  RRILKNFLLSLNPRTPYLCYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTP  243
                RRILKNFLLSLNPRTPYLCYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTP
Subject  12043  RRILKNFLLSLNPRTPYLCYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTP  12285

Range 3: 12043 to 12285 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
189.4 bits(407) 0.0 81/81(100%) 0/81(0%) Minus/Plus
Query        1  RCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VTKIRGSRI*G*KKIF*NPP  243
                RCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VTKIRGSRI*G*KKIF*NPP
Subject  12043  RCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VTKIRGSRI*G*KKIF*NPP  12285

Range 4: 12044 to 12283 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
188.5 bits(405) 0.0 80/80(100%) 0/80(0%) Minus/Plus
Query        3  GVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*QR*GVLGFKDRRKFFKIR  242
                GVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*QR*GVLGFKDRRKFFKIR
Subject  12044  GVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*QR*GVLGFKDRRKFFKIR  12283

Range 5: 12045 to 12284 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
182.9 bits(401) 0.0 80/80(100%) 0/80(0%) Minus/Plus
Query        2  VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSNKDKGFSDLRIEENFLKSA  241
                VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSNKDKGFSDLRIEENFLKSA
Subject  12045  VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSNKDKGFSDLRIEENFLKSA  12284

Range 6: 12044 to 12283 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
180.7 bits(388) 0.0 80/80(100%) 0/80(0%) Plus/Minus
Query        3  ADFKKFSSILKSENPLSLLLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDT  242
                ADFKKFSSILKSENPLSLLLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDT
Subject  12044  ADFKKFSSILKSENPLSLLLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDT  12283

Grapevine leafroll associated virus 3 isolate Cl 766, complete genome

Sequence ID: EU344893.1 Length: 17919 Number of Matches: 6

Range 1: 11466 to 11705 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
195.8 bits(421) 0.0 80/80(100%) 0/80(0%) Plus/Minus
Query        2  GGF*KIFFYP*IREPLIFVTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPRFIDQ*IQYVCCPGYQIFILYFLTINDNRH  241
                GGF*KIFFYP*IREPLIFVTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPRFIDQ*IQYVCCPGYQIFILYFLTINDNRH
Subject  11466  GGF*KIFFYP*IREPLIFVTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPRFIDQ*IQYVCCPGYQIFILYFLTINDNRH  11705

Range 2: 11464 to 11706 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
192.6 bits(414) 0.0 81/81(100%) 0/81(0%) Plus/Minus
Query        1  RRILKNFLLSLNPRTPYLCYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTP  243
                RRILKNFLLSLNPRTPYLCYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTP
Subject  11464  RRILKNFLLSLNPRTPYLCYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTP  11706

Range 3: 11464 to 11706 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
189.4 bits(407) 0.0 81/81(100%) 0/81(0%) Minus/Plus
Query        1  RCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VTKIRGSRI*G*KKIF*NPP  243
                RCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VTKIRGSRI*G*KKIF*NPP
Subject  11464  RCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VTKIRGSRI*G*KKIF*NPP  11706

Range 4: 11465 to 11704 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
188.5 bits(405) 0.0 80/80(100%) 0/80(0%) Minus/Plus
Query        3  GVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*QR*GVLGFKDRRKFFKIR  242
                GVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*QR*GVLGFKDRRKFFKIR
Subject  11465  GVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*QR*GVLGFKDRRKFFKIR  11704

Range 5: 11466 to 11705 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
182.9 bits(401) 0.0 80/80(100%) 0/80(0%) Minus/Plus
Query        2  VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSNKDKGFSDLRIEENFLKSA  241
                VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSNKDKGFSDLRIEENFLKSA
Subject  11466  VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSNKDKGFSDLRIEENFLKSA  11705

Range 6: 11465 to 11704 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
180.7 bits(388) 0.0 80/80(100%) 0/80(0%) Plus/Minus
Query        3  ADFKKFSSILKSENPLSLLLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDT  242
                ADFKKFSSILKSENPLSLLLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDT
Subject  11465  ADFKKFSSILKSENPLSLLLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDT  11704

Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome

Sequence ID: KX756669.1 Length: 18313 Number of Matches: 6

Range 1: 11860 to 12099 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.0 bits(417) 0.0 79/80(99%) 0/80(0%) Plus/Minus
Query        2  GGF*KIFFYP*IREPLIFVTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPRFIDQ*IQYVCCPGYQIFILYFLTINDNRH  241
                GGF*KIFFYP*IREPLIFVTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPRFIDQ*IQYVCCPGYQIFI YFLTINDNRH
Subject  11860  GGF*KIFFYP*IREPLIFVTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPRFIDQ*IQYVCCPGYQIFIFYFLTINDNRH  12099

Range 2: 11858 to 12100 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
189.8 bits(408) 0.0 80/81(99%) 0/81(0%) Plus/Minus
Query        1  RRILKNFLLSLNPRTPYLCYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTP  243
                RRILKNFLLSLNPRTPYLCYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSQIYRPMNPVRLLSRVPDIH LLPHH*R*QTP
Subject  11858  RRILKNFLLSLNPRTPYLCYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSQIYRPMNPVRLLSRVPDIHFLLPHH*R*QTP  12100

Range 3: 11858 to 12100 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
188.0 bits(404) 0.0 80/81(99%) 0/81(0%) Minus/Plus
Query        1  RCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VTKIRGSRI*G*KKIF*NPP  243
                RCLLSLMVRK*+MNIWYPGQQTYWIHWSINLGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VTKIRGSRI*G*KKIF*NPP
Subject  11858  RCLLSLMVRK*KMNIWYPGQQTYWIHWSINLGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VTKIRGSRI*G*KKIF*NPP  12100

Range 4: 11859 to 12098 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
186.6 bits(401) 0.0 79/80(99%) 0/80(0%) Minus/Plus
Query        3  GVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*QR*GVLGFKDRRKFFKIR  242
                GVCYR*W*GSK+*ISGTRDNKRTGFIGL*IWERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*QR*GVLGFKDRRKFFKIR
Subject  11859  GVCYR*W*GSKK*ISGTRDNKRTGFIGL*IWERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*QR*GVLGFKDRRKFFKIR  12098

Range 5: 11860 to 12099 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
182.9 bits(401) 0.0 80/80(100%) 0/80(0%) Minus/Plus
Query        2  VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSNKDKGFSDLRIEENFLKSA  241
                VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSNKDKGFSDLRIEENFLKSA
Subject  11860  VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSNKDKGFSDLRIEENFLKSA  12099

Range 6: 11859 to 12098 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
180.7 bits(388) 0.0 80/80(100%) 0/80(0%) Plus/Minus
Query        3  ADFKKFSSILKSENPLSLLLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDT  242
                ADFKKFSSILKSENPLSLLLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDT
Subject  11859  ADFKKFSSILKSENPLSLLLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDT  12098

Grapevine leafroll associated virus 3 isolate 621, complete genome

Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 6

Range 1: 12043 to 12285 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
192.6 bits(414) 0.0 81/81(100%) 0/81(0%) Plus/Minus
Query        1  RRILKNFLLSLNPRTPYLCYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTP  243
                RRILKNFLLSLNPRTPYLCYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTP
Subject  12043  RRILKNFLLSLNPRTPYLCYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTP  12285

Range 2: 12045 to 12284 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
191.2 bits(411) 0.0 79/80(99%) 0/80(0%) Plus/Minus
Query        2  GGF*KIFFYP*IREPLIFVTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPRFIDQ*IQYVCCPGYQIFILYFLTINDNRH  241
                GGF*KIFFY *IREPLIFVTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPRFIDQ*IQYVCCPGYQIFILYFLTINDNRH
Subject  12045  GGF*KIFFYL*IREPLIFVTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPRFIDQ*IQYVCCPGYQIFILYFLTINDNRH  12284

Range 3: 12044 to 12283 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
188.5 bits(405) 0.0 80/80(100%) 0/80(0%) Minus/Plus
Query        3  GVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*QR*GVLGFKDRRKFFKIR  242
                GVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*QR*GVLGFKDRRKFFKIR
Subject  12044  GVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*QR*GVLGFKDRRKFFKIR  12283

Range 4: 12043 to 12285 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
185.7 bits(399) 0.0 80/81(99%) 0/81(0%) Minus/Plus
Query        1  RCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VTKIRGSRI*G*KKIF*NPP  243
                RCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VTKIRGSRI* *KKIF*NPP
Subject  12043  RCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VTKIRGSRI*R*KKIF*NPP  12285

Range 5: 12045 to 12284 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
181.5 bits(398) 0.0 79/80(99%) 0/80(0%) Minus/Plus
Query        2  VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSNKDKGFSDLRIEENFLKSA  241
                VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSNKDKGFSDL+IEENFLKSA
Subject  12045  VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSNKDKGFSDLKIEENFLKSA  12284

Range 6: 12044 to 12283 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
178.9 bits(384) 0.0 79/80(99%) 0/80(0%) Plus/Minus
Query        3  ADFKKFSSILKSENPLSLLLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDT  242
                ADFKKFSSI KSENPLSLLLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDT
Subject  12044  ADFKKFSSIFKSENPLSLLLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDT  12283

Nucleotide Sequence (220 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
22
44
66
88
110
132
154
176
198
220

Descriptions

Alignments

Grapevine leafroll associated virus 3 isolate 3138 07, complete genome

Sequence ID: JX559645.1 Length: 18498 Number of Matches: 7

Range 1: 579 to 686 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.8 bits(159) 0.0 35/36(97%) 0/36(0%) Plus/Minus
Query        3  RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*ELLR  110
                RTTEEEGQTSLKQQENLKLEKERS*ILGRNS* LLR
Subject    579  RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*VLLR  686

Range 2: 470 to 535 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.2 bits(109) 0.0 21/22(95%) 0/22(0%) Plus/Minus
Query      154  NIFKLVKENYEKTKNKALKEND  219
                NIFKLVKENYEKT+NKALKEND
Subject    470  NIFKLVKENYEKTENKALKEND  535

Range 3: 520 to 591 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.5 bits(106) 0.0 23/24(96%) 0/24(0%) Plus/Minus
Query       98  GVT*ENRKSEH*D*RKLKEIFLNL  169
                GVT*ENRKS+H*D*RKLKEIFLNL
Subject    520  GVT*ENRKSKH*D*RKLKEIFLNL  591

Range 4: 469 to 534 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.8 bits(109) 0.0 21/22(95%) 0/22(0%) Minus/Plus
Query      155  RHFLLVLCFSFFRSFPSQV*KY  220
                RHFLLVLCF FFRSFPSQV*KY
Subject    469  RHFLLVLCFPFFRSFPSQV*KY  534

Range 5: 586 to 687 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.8 bits(85) 0.0 33/34(97%) 0/34(0%) Minus/Plus
Query        2  NS*EFLPKIQXXXXXXXXXXXXLREVCPSSSVVL  103
                N+*EFLPKIQLLSFSSFKFSCCLREVCPSSSVVL
Subject    586  NT*EFLPKIQLLSFSSFKFSCCLREVCPSSSVVL  687

Range 6: 471 to 533 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.3 bits(97) 0.0 20/21(95%) 0/21(0%) Plus/Minus
Query      156  YF*TCEGKLRKNEKQSTKRK*  218
                YF*TCEGKLRKN KQSTKRK*
Subject    471  YF*TCEGKLRKNGKQSTKRK*  533

Range 7: 643 to 687 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.0 bits(81) 0.0 15/15(100%) 0/15(0%) Plus/Minus
Query        2  KDDGRRRANFPQTAG  46
                KDDGRRRANFPQTAG
Subject    643  KDDGRRRANFPQTAG  687

Grapevine leafroll associated virus 3 isolate 621, complete genome

Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 7

Range 1: 579 to 686 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.8 bits(159) 0.0 35/36(97%) 0/36(0%) Plus/Minus
Query        3  RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*ELLR  110
                RTTEEEGQTSLKQQENLKLEKERS*ILGRNS* LLR
Subject    579  RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*VLLR  686

Range 2: 470 to 535 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.2 bits(109) 0.0 21/22(95%) 0/22(0%) Plus/Minus
Query      154  NIFKLVKENYEKTKNKALKEND  219
                NIFKLVKENYEKT+NKALKEND
Subject    470  NIFKLVKENYEKTENKALKEND  535

Range 3: 520 to 591 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.5 bits(106) 0.0 23/24(96%) 0/24(0%) Plus/Minus
Query       98  GVT*ENRKSEH*D*RKLKEIFLNL  169
                GVT*ENRKS+H*D*RKLKEIFLNL
Subject    520  GVT*ENRKSKH*D*RKLKEIFLNL  591

Range 4: 469 to 534 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.8 bits(109) 0.0 21/22(95%) 0/22(0%) Minus/Plus
Query      155  RHFLLVLCFSFFRSFPSQV*KY  220
                RHFLLVLCF FFRSFPSQV*KY
Subject    469  RHFLLVLCFPFFRSFPSQV*KY  534

Range 5: 586 to 687 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.8 bits(85) 0.0 33/34(97%) 0/34(0%) Minus/Plus
Query        2  NS*EFLPKIQXXXXXXXXXXXXLREVCPSSSVVL  103
                N+*EFLPKIQLLSFSSFKFSCCLREVCPSSSVVL
Subject    586  NT*EFLPKIQLLSFSSFKFSCCLREVCPSSSVVL  687

Range 6: 471 to 533 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.3 bits(97) 0.0 20/21(95%) 0/21(0%) Plus/Minus
Query      156  YF*TCEGKLRKNEKQSTKRK*  218
                YF*TCEGKLRKN KQSTKRK*
Subject    471  YF*TCEGKLRKNGKQSTKRK*  533

Range 7: 643 to 687 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.0 bits(81) 0.0 15/15(100%) 0/15(0%) Plus/Minus
Query        2  KDDGRRRANFPQTAG  46
                KDDGRRRANFPQTAG
Subject    643  KDDGRRRANFPQTAG  687

Grapevine leafroll associated virus 3 isolate WA MR, complete genome

Sequence ID: GU983863.1 Length: 18498 Number of Matches: 7

Range 1: 579 to 686 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.8 bits(159) 0.0 35/36(97%) 0/36(0%) Plus/Minus
Query        3  RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*ELLR  110
                RTTEEEGQTSLKQQENLKLEKERS*ILGRNS* LLR
Subject    579  RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*VLLR  686

Range 2: 470 to 535 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.2 bits(109) 0.0 21/22(95%) 0/22(0%) Plus/Minus
Query      154  NIFKLVKENYEKTKNKALKEND  219
                NIFKLVKENYEKT+NKALKEND
Subject    470  NIFKLVKENYEKTENKALKEND  535

Range 3: 520 to 591 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.5 bits(106) 0.0 23/24(96%) 0/24(0%) Plus/Minus
Query       98  GVT*ENRKSEH*D*RKLKEIFLNL  169
                GVT*ENRKS+H*D*RKLKEIFLNL
Subject    520  GVT*ENRKSKH*D*RKLKEIFLNL  591

Range 4: 469 to 534 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.8 bits(109) 0.0 21/22(95%) 0/22(0%) Minus/Plus
Query      155  RHFLLVLCFSFFRSFPSQV*KY  220
                RHFLLVLCF FFRSFPSQV*KY
Subject    469  RHFLLVLCFPFFRSFPSQV*KY  534

Range 5: 586 to 687 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.8 bits(85) 0.0 33/34(97%) 0/34(0%) Minus/Plus
Query        2  NS*EFLPKIQXXXXXXXXXXXXLREVCPSSSVVL  103
                N+*EFLPKIQLLSFSSFKFSCCLREVCPSSSVVL
Subject    586  NT*EFLPKIQLLSFSSFKFSCCLREVCPSSSVVL  687

Range 6: 471 to 533 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.3 bits(97) 0.0 20/21(95%) 0/21(0%) Plus/Minus
Query      156  YF*TCEGKLRKNEKQSTKRK*  218
                YF*TCEGKLRKN KQSTKRK*
Subject    471  YF*TCEGKLRKNGKQSTKRK*  533

Range 7: 643 to 687 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.0 bits(81) 0.0 15/15(100%) 0/15(0%) Plus/Minus
Query        2  KDDGRRRANFPQTAG  46
                KDDGRRRANFPQTAG
Subject    643  KDDGRRRANFPQTAG  687

Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome

Sequence ID: KX756669.1 Length: 18313 Number of Matches: 7

Range 1: 394 to 501 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.8 bits(159) 0.0 35/36(97%) 0/36(0%) Plus/Minus
Query        3  RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*ELLR  110
                RTTEEEGQTSLKQQENLKLEKERS*ILGRNS* LLR
Subject    394  RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*VLLR  501

Range 2: 285 to 350 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.2 bits(109) 0.0 21/22(95%) 0/22(0%) Plus/Minus
Query      154  NIFKLVKENYEKTKNKALKEND  219
                NIFKLVKENYEKT+NKALKEND
Subject    285  NIFKLVKENYEKTENKALKEND  350

Range 3: 335 to 406 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.5 bits(106) 0.0 23/24(96%) 0/24(0%) Plus/Minus
Query       98  GVT*ENRKSEH*D*RKLKEIFLNL  169
                GVT*ENRKS+H*D*RKLKEIFLNL
Subject    335  GVT*ENRKSKH*D*RKLKEIFLNL  406

Range 4: 284 to 349 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.8 bits(109) 0.0 21/22(95%) 0/22(0%) Minus/Plus
Query      155  RHFLLVLCFSFFRSFPSQV*KY  220
                RHFLLVLCF FFRSFPSQV*KY
Subject    284  RHFLLVLCFPFFRSFPSQV*KY  349

Range 5: 401 to 502 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.8 bits(85) 0.0 33/34(97%) 0/34(0%) Minus/Plus
Query        2  NS*EFLPKIQXXXXXXXXXXXXLREVCPSSSVVL  103
                N+*EFLPKIQLLSFSSFKFSCCLREVCPSSSVVL
Subject    401  NT*EFLPKIQLLSFSSFKFSCCLREVCPSSSVVL  502

Range 6: 286 to 348 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.3 bits(97) 0.0 20/21(95%) 0/21(0%) Plus/Minus
Query      156  YF*TCEGKLRKNEKQSTKRK*  218
                YF*TCEGKLRKN KQSTKRK*
Subject    286  YF*TCEGKLRKNGKQSTKRK*  348

Range 7: 458 to 502 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.0 bits(81) 0.0 15/15(100%) 0/15(0%) Plus/Minus
Query        2  KDDGRRRANFPQTAG  46
                KDDGRRRANFPQTAG
Subject    458  KDDGRRRANFPQTAG  502

Grapevine leafroll associated virus 3, complete genome

Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 1

Range 1: 3 to 107 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.5 bits(154) 0.0 34/35(97%) 0/35(0%) Plus/Minus
Query        3  RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*ELL  107
                RTTEEEGQTSLKQQENLKLEKERS*ILGRNS* LL
Subject      3  RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*VLL  107

Nucleotide Sequence (1025 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
103
206
309
412
515
618
721
824
927
1025

Descriptions

Alignments

Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome

Sequence ID: KX756669.1 Length: 18313 Number of Matches: 23

Range 1: 17392 to 18009 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
479.0 bits(1039) 0.0 203/206(99%) 0/206(0%) Minus/Minus
Query        3  PFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQQTISTANKHAQISSDNCNPFENLTLAEQHNNFIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVCLLLQLRPVRPELASCIC*CIDHLSIQDIFCFPSFHDTLRITPST**PPEHLPNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA  620
                PFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQ TISTANKHAQISSDNCNPFENLTLAEQHN FIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVCLLLQLRPVRPELASCIC*CIDHLSIQDIFCFPSFHDTLRITPST**PPEHLPNV*+NL*LCPPNTPLGHKRRRSLYCQ*ELFYA
Subject  17392  PFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQLTISTANKHAQISSDNCNPFENLTLAEQHNIFIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVCLLLQLRPVRPELASCIC*CIDHLSIQDIFCFPSFHDTLRITPST**PPEHLPNV*SNL*LCPPNTPLGHKRRRSLYCQ*ELFYA  18009

Range 2: 18002 to 18313 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
239.8 bits(517) 0.0 102/104(98%) 0/104(0%) Minus/Minus
Query      614  DLTYCR*VSLVRGPPRSQTLIGFWRLLYYTNIISLSTLRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**FTDLPPF  925
                DLTYCR*VSLVRGPPRSQTLIGFWRLLYYTNIISLSTLRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**F DLP F
Subject  18002  DLTYCR*VSLVRGPPRSQTLIGFWRLLYYTNIISLSTLRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**FPDLPLF  18313

Range 3: 17391 to 18014 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
478.5 bits(1038) 0.0 203/208(98%) 0/208(0%) Plus/Plus
Query        2  LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEGADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL*NCYVVQPVSNFQTGYNYRYLFAHVC*RC*LFVVVEGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*KRGK  625
                LHRTILIDSIDSAFAYDQVGCLVGIARGL+KHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEG DILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL* CYVVQPVSNFQTGYNYRYLFAHVC*RC*L VVVEGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*KRG+
Subject  17391  LHRTILIDSIDSAFAYDQVGCLVGIARGLIKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEGEDILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL*KCYVVQPVSNFQTGYNYRYLFAHVC*RC*LLVVVEGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*KRGR  18014

Range 4: 18003 to 18311 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
215.1 bits(463) 0.0 101/103(98%) 0/103(0%) Plus/Plus
Query      615  KGGRSVNY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*YNKRQNPIKVWDLGGPLTRLTYRQ*VR  923
                K GRS NY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*YNKRQNPIKVWDLGGPLTRLTYRQ*VR
Subject  18003  KRGRSGNY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*YNKRQNPIKVWDLGGPLTRLTYRQ*VR  18311

Range 5: 17391 to 18008 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
424.9 bits(921) 0.0 202/206(98%) 0/206(0%) Minus/Minus
Query        2  PFLHMLIRAYK**LXXXXXXXXXXXTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNNKQLAPLTNMRK*VAIIVTRLKI*HWLNNITIL*CSATKRQEQHPSDPEI*RELITTD*MIRS*YVCSFNCGQSGLS*HHVFVSALIT*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ  619
                PFLHMLIRAYK**LINIPINVTPINTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNN QLAPLTNMRK*VAIIVTRLKI*HWLNNIT L*CSATKRQEQHPSDPEI*RELITTD*MIRS*YV SFNCGQSGLS*HHVFVSALIT*VSKISFASPLSTTHFE*LHRLDDLQNIFRMF QTSSYAHQTPHLVISEGGVYTVNENCSMQ
Subject  17391  PFLHMLIRAYK**LINIPINVTPINTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNN*QLAPLTNMRK*VAIIVTRLKI*HWLNNITFL*CSATKRQEQHPSDPEI*RELITTD*MIRS*YVFSFNCGQSGLS*HHVFVSALIT*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFNQTSSYAHQTPHLVISEGGVYTVNENCSMQ  18008

Range 6: 18007 to 18312 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
222.8 bits(480) 0.0 100/102(98%) 0/102(0%) Minus/Minus
Query      619  T*LIVDKLAS*EARLGPKL*LDFGVYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEESLPINNSQTFP  924
                T*LIVDKLAS*EARLGPKL*LDFGVYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD* NYFIFLTFVYFKFIEESLPIN+SQTFP
Subject  18007  T*LIVDKLAS*EARLGPKL*LDFGVYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*LNYFIFLTFVYFKFIEESLPINSSQTFP  18312

Range 7: 17719 to 18009 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
225.1 bits(485) 0.0 95/97(98%) 0/97(0%) Plus/Plus
Query      330  *RFVAEHYKIVMLFSQCQIFKRVTIIATYLRMFVSGANCLLL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRKG  620
                *RFVAEHYK VMLFSQCQIFKRVTIIATYLRMFVSGANC LL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRKG
Subject  17719  *RFVAEHYKNVMLFSQCQIFKRVTIIATYLRMFVSGANC*LL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRKG  18009

Range 8: 17392 to 17658 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
211.8 bits(456) 0.0 87/89(98%) 0/89(0%) Plus/Plus
Query        3  CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*VINALTNT*C*LRPDWPQLKEQTYYER  269
                CIEQFSLTV*TPPSLMTKWGVWWA*LEV LNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*VINALTNT*C*LRPDWPQLKE+TYYER
Subject  17392  CIEQFSLTV*TPPSLMTKWGVWWA*LEV*LNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*VINALTNT*C*LRPDWPQLKEKTYYER  17658

Range 9: 17989 to 18312 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
185.7 bits(399) 0.0 100/108(93%) 0/108(0%) Plus/Plus
Query      601  LAYVEKGEGL*IINR*RLFNKFEINKSKKNEXXXXXXXXXXXXCRIGYISR*DD*TLPHGLIL*YL*N*SVKSIVILY*YSIINAKIQLKFGT*AGLLRG*LIDNKLG  924
                ++   KGEGL  INR*RLFNKFEINKSKKNEII+LVFLFVFRFCRIGYISR*DD*TLPHGLIL*YL*N*SVKSIVILY*YSIINAKIQLKFGT*AGLLRG*LIDNKLG
Subject  17989  ISICRKGEGLGTINR*RLFNKFEINKSKKNEIIKLVFLFVFRFCRIGYISR*DD*TLPHGLIL*YL*N*SVKSIVILY*YSIINAKIQLKFGT*AGLLRG*LIDNKLG  18312

Range 10: 17390 to 17611 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
169.2 bits(363) 0.0 73/74(99%) 0/74(0%) Plus/Plus
Query        1  AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFGRCSGGHQVDGVIRSVSWKEGKQKISWILK*SMH*QIHDAN  222
                AA*NNSH*QYRLRLRL*PSGVFGGHS*RF *TFGRCSGGHQVDGVIRSVSWKEGKQKISWILK*SMH*QIHDAN
Subject  17390  AA*NNSH*QYRLRLRL*PSGVFGGHS*RFD*TFGRCSGGHQVDGVIRSVSWKEGKQKISWILK*SMH*QIHDAN  17611

Range 11: 18137 to 18313 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
124.3 bits(265) 0.0 59/59(100%) 0/59(0%) Plus/Plus
Query      749  RGKMTKLYLTV*YSDICKISP*SR**YYISIV**TPKSN*SLGPRRASYEANLSTIS*V  925
                RGKMTKLYLTV*YSDICKISP*SR**YYISIV**TPKSN*SLGPRRASYEANLSTIS*V
Subject  18137  RGKMTKLYLTV*YSDICKISP*SR**YYISIV**TPKSN*SLGPRRASYEANLSTIS*V  18313

Range 12: 17858 to 18013 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.0 bits(238) 0.0 51/52(98%) 0/52(0%) Plus/Plus
Query      469  GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKGE  624
                GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKG+
Subject  17858  GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKGK  18013

Range 13: 17654 to 17797 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.5 bits(226) 0.0 47/48(98%) 0/48(0%) Plus/Plus
Query      265  NESSSQW**VLFKFRDR*DVALDALLRSTIKLLCCSASVKFSNGLQLS  408
                NESSSQW**VLFKFRDR*DVALDALLRSTIK+LCCSASVKFSNGLQLS
Subject  17654  NESSSQW**VLFKFRDR*DVALDALLRSTIKMLCCSASVKFSNGLQLS  17797

Range 14: 18002 to 18097 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.8 bits(122) 0.0 28/32(88%) 0/32(0%) Plus/Plus
Query      614  KRGKVCELLIGKDSSINLK*TKVRKMK*LG*S  709
                ++GKV ELLIGKDSSINLK*TKVRKMK*L *S
Subject  18002  EKGKVWELLIGKDSSINLK*TKVRKMK*LS*S  18097

Range 15: 18093 to 18311 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
164.6 bits(353) 0.0 73/73(100%) 0/73(0%) Minus/Minus
Query      705  PNLLSIS*PRKRPA*VPNFNWILAFIILY*YNITIDFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT  923
                PNLLSIS*PRKRPA*VPNFNWILAFIILY*YNITIDFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT
Subject  18093  PNLLSIS*PRKRPA*VPNFNWILAFIILY*YNITIDFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT  18311

Range 16: 17390 to 17611 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
129.8 bits(277) 0.0 73/74(99%) 0/74(0%) Minus/Minus
Query        1  VSIMYLLVH*SXXXXXXXXXXXXXRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS  222
                VSIMYLLVH*SLKYPRYLLLPLFPRHTSNNSIDLMTSRTSSECL KPLAMPTKHPTWS*AKAESILSMRIVLCS
Subject  17390  VSIMYLLVH*SLKYPRYLLLPLFPRHTSNNSIDLMTSRTSSECLIKPLAMPTKHPTWS*AKAESILSMRIVLCS  17611

Range 17: 17651 to 17830 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
126.2 bits(269) 0.0 59/60(98%) 0/60(0%) Minus/Minus
Query      262  *HR*QTCANK*R*L*PV*KFDTG*TT*QFYSAPQQSVKSNILAIPKFEENLLPLTR*FVR  441
                *HR*QTCANK*R*L*PV*KFDTG*TT* FYSAPQQSVKSNILAIPKFEENLLPLTR*FVR
Subject  17651  *HR*QTCANK*R*L*PV*KFDTG*TT*HFYSAPQQSVKSNILAIPKFEENLLPLTR*FVR  17830

Range 18: 17897 to 18010 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.3 bits(195) 0.0 38/38(100%) 0/38(0%) Minus/Minus
Query      508  PLFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR  621
                PLFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR
Subject  17897  PLFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR  18010

Range 19: 9950 to 10048 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.5 bits(176) 0.0 33/33(100%) 0/33(0%) Minus/Plus
Query      927  YYVGYFGATPKVFPLCV*PLM*VSLFYFCLLGG  1025
                YYVGYFGATPKVFPLCV*PLM*VSLFYFCLLGG
Subject   9950  YYVGYFGATPKVFPLCV*PLM*VSLFYFCLLGG  10048

Range 20: 9952 to 10047 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.0 bits(166) 0.0 31/32(97%) 0/32(0%) Minus/Plus
Query      928  LRRLFWRYAKGFSSLCVAFNVGFFVLFLPFRR  1023
                LRRL WRYAKGFSSLCVAFNVGFFVLFLPFRR
Subject   9952  LRRLLWRYAKGFSSLCVAFNVGFFVLFLPFRR  10047

Range 21: 9952 to 10059 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.0 bits(164) 0.0 33/36(92%) 0/36(0%) Plus/Minus
Query      916  KLGQPPKRQK*NKETYIKGYTQRGKTFGVAPK*PT*  1023
                K   PPKRQK*NKETYIKGYTQRGKTFGVAPK*PT*
Subject   9952  KRNAPPKRQK*NKETYIKGYTQRGKTFGVAPK*PT*  10059

Range 22: 9950 to 10054 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.7 bits(161) 0.0 32/35(91%) 0/35(0%) Plus/Minus
Query      921  RSAA*KAKIKQRNLH*RLHTKRKNLWRSAKITYVI  1025
                + AA*KAKIKQRNLH*RLHTKRKNLWRSAK+TYVI
Subject   9950  KRAA*KAKIKQRNLH*RLHTKRKNLWRSAKVTYVI  10054

Range 23: 9951 to 10049 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.5 bits(152) 0.0 32/33(97%) 0/33(0%) Minus/Plus
Query      926  IT*VILALRQRFFLFVCSL*CRFLCFIFAF*AA  1024
                IT*V LALRQRFFLFVCSL*CRFLCFIFAF*AA
Subject   9951  IT*VTLALRQRFFLFVCSL*CRFLCFIFAF*AA  10049

Grapevine leafroll associated virus 3 isolate Cl 766, complete genome

Sequence ID: EU344893.1 Length: 17919 Number of Matches: 23

Range 1: 16998 to 17615 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
475.3 bits(1031) 0.0 203/206(99%) 0/206(0%) Minus/Minus
Query        3  PFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQQTISTANKHAQISSDNCNPFENLTLAEQHNNFIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVCLLLQLRPVRPELASCIC*CIDHLSIQDIFCFPSFHDTLRITPST**PPEHLPNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA  620
                PFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQ TISTANKHAQISSDNCNPFENLTLAEQHN FIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVCLLLQLRPVRPELASCIC* IDHLSIQDIFCFPSFHDTLRITPST**PPEHLPNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA
Subject  16998  PFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQLTISTANKHAQISSDNCNPFENLTLAEQHNIFIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVCLLLQLRPVRPELASCIC*YIDHLSIQDIFCFPSFHDTLRITPST**PPEHLPNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA  17615

Range 2: 17608 to 17919 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
239.3 bits(516) 0.0 102/104(98%) 0/104(0%) Minus/Minus
Query      614  DLTYCR*VSLVRGPPRSQTLIGFWRLLYYTNIISLSTLRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**FTDLPPF  925
                DLTYCR*VSLVRGPPRSQTLIGFWRLLYYTNIISLSTLRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**F DLP F
Subject  17608  DLTYCR*VSLVRGPPRSQTLIGFWRLLYYTNIISLSTLRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**FPDLPFF  17919

Range 3: 16997 to 17620 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
476.7 bits(1034) 0.0 203/208(98%) 0/208(0%) Plus/Plus
Query        2  LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEGADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL*NCYVVQPVSNFQTGYNYRYLFAHVC*RC*LFVVVEGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*KRGK  625
                LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVE ADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL* CYVVQPVSNFQTGYNYRYLFAHVC*RC*L VVVEGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*K+G+
Subject  16997  LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEEADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL*KCYVVQPVSNFQTGYNYRYLFAHVC*RC*LLVVVEGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*KKGR  17620

Range 4: 17609 to 17917 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
215.1 bits(463) 0.0 101/103(98%) 0/103(0%) Plus/Plus
Query      615  KGGRSVNY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*YNKRQNPIKVWDLGGPLTRLTYRQ*VR  923
                K GRS NY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*YNKRQNPIKVWDLGGPLTRLTYRQ*VR
Subject  17609  KKGRSGNY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*YNKRQNPIKVWDLGGPLTRLTYRQ*VR  17917

Range 5: 16997 to 17611 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
424.5 bits(920) 0.0 201/205(98%) 0/205(0%) Minus/Minus
Query        2  FLHMLIRAYK**LXXXXXXXXXXXTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNNKQLAPLTNMRK*VAIIVTRLKI*HWLNNITIL*CSATKRQEQHPSDPEI*RELITTD*MIRS*YVCSFNCGQSGLS*HHVFVSALIT*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ  616
                FLHMLIRAYK**LINIPINVTPINTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNN QLAPLTNMRK*VAIIVTRLKI*HWLNNIT L*CSATKRQEQHPSDPEI*RELITTD*MIRS*YVC FNCGQSGLS*HHVFVS LIT*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ
Subject  16997  FLHMLIRAYK**LINIPINVTPINTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNN*QLAPLTNMRK*VAIIVTRLKI*HWLNNITFL*CSATKRQEQHPSDPEI*RELITTD*MIRS*YVCFFNCGQSGLS*HHVFVSTLIT*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ  17611

Range 6: 17613 to 17918 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
227.4 bits(490) 0.0 101/102(99%) 0/102(0%) Minus/Minus
Query      619  T*LIVDKLAS*EARLGPKL*LDFGVYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEESLPINNSQTFP  924
                T*LIVDKLAS*EARLGPKL*LDFGVYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEESLPIN+SQTFP
Subject  17613  T*LIVDKLAS*EARLGPKL*LDFGVYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEESLPINSSQTFP  17918

Range 7: 17325 to 17612 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
222.4 bits(479) 0.0 94/96(98%) 0/96(0%) Plus/Plus
Query      330  *RFVAEHYKIVMLFSQCQIFKRVTIIATYLRMFVSGANCLLL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRK  617
                *RFVAEHYK VMLFSQCQIFKRVTIIATYLRMFVSGANC LL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRK
Subject  17325  *RFVAEHYKNVMLFSQCQIFKRVTIIATYLRMFVSGANC*LL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRK  17612

Range 8: 16998 to 17264 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
216.0 bits(465) 0.0 87/89(98%) 0/89(0%) Plus/Plus
Query        3  CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*VINALTNT*C*LRPDWPQLKEQTYYER  269
                CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*VIN LTNT*C*LRPDWPQLK+QTYYER
Subject  16998  CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*VINVLTNT*C*LRPDWPQLKKQTYYER  17264

Range 9: 17595 to 17918 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
182.1 bits(391) 0.0 100/108(93%) 0/108(0%) Plus/Plus
Query      601  LAYVEKGEGL*IINR*RLFNKFEINKSKKNEXXXXXXXXXXXXCRIGYISR*DD*TLPHGLIL*YL*N*SVKSIVILY*YSIINAKIQLKFGT*AGLLRG*LIDNKLG  924
                ++   K EGL  INR*RLFNKFEINKSKKNEIIRLVFLFVFRFCRIGYISR*DD*TLPHGLIL*YL*N*SVKSIVILY*YSIINAKIQLKFGT*AGLLRG*LIDNKLG
Subject  17595  ISICRKREGLGTINR*RLFNKFEINKSKKNEIIRLVFLFVFRFCRIGYISR*DD*TLPHGLIL*YL*N*SVKSIVILY*YSIINAKIQLKFGT*AGLLRG*LIDNKLG  17918

Range 10: 16996 to 17217 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
169.2 bits(363) 0.0 73/74(99%) 0/74(0%) Plus/Plus
Query        1  AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFGRCSGGHQVDGVIRSVSWKEGKQKISWILK*SMH*QIHDAN  222
                AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFGRCSGGHQVDGVIRSVSWKEGKQKISWILK*SM+*QIHDAN
Subject  16996  AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFGRCSGGHQVDGVIRSVSWKEGKQKISWILK*SMY*QIHDAN  17217

Range 11: 17743 to 17919 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
124.3 bits(265) 0.0 59/59(100%) 0/59(0%) Plus/Plus
Query      749  RGKMTKLYLTV*YSDICKISP*SR**YYISIV**TPKSN*SLGPRRASYEANLSTIS*V  925
                RGKMTKLYLTV*YSDICKISP*SR**YYISIV**TPKSN*SLGPRRASYEANLSTIS*V
Subject  17743  RGKMTKLYLTV*YSDICKISP*SR**YYISIV**TPKSN*SLGPRRASYEANLSTIS*V  17919

Range 12: 17464 to 17619 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.0 bits(238) 0.0 51/52(98%) 0/52(0%) Plus/Plus
Query      469  GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKGE  624
                GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKG+
Subject  17464  GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKGK  17619

Range 13: 17260 to 17403 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.5 bits(226) 0.0 47/48(98%) 0/48(0%) Plus/Plus
Query      265  NESSSQW**VLFKFRDR*DVALDALLRSTIKLLCCSASVKFSNGLQLS  408
                NESSSQW**VLFKFRDR*DVALDALLRSTIK+LCCSASVKFSNGLQLS
Subject  17260  NESSSQW**VLFKFRDR*DVALDALLRSTIKMLCCSASVKFSNGLQLS  17403

Range 14: 17608 to 17703 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.6 bits(128) 0.0 29/32(91%) 0/32(0%) Plus/Plus
Query      614  KRGKVCELLIGKDSSINLK*TKVRKMK*LG*S  709
                ++GKV ELLIGKDSSINLK*TKVRKMK*LG*S
Subject  17608  EKGKVWELLIGKDSSINLK*TKVRKMK*LG*S  17703

Range 15: 17699 to 17917 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
164.6 bits(353) 0.0 73/73(100%) 0/73(0%) Minus/Minus
Query      705  PNLLSIS*PRKRPA*VPNFNWILAFIILY*YNITIDFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT  923
                PNLLSIS*PRKRPA*VPNFNWILAFIILY*YNITIDFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT
Subject  17699  PNLLSIS*PRKRPA*VPNFNWILAFIILY*YNITIDFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT  17917

Range 16: 16996 to 17217 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
132.6 bits(283) 0.0 74/74(100%) 0/74(0%) Minus/Minus
Query        1  VSIMYLLVH*SXXXXXXXXXXXXXRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS  222
                VSIMYLLVH*SLKYPRYLLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS
Subject  16996  VSIMYLLVH*SLKYPRYLLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS  17217

Range 17: 17257 to 17436 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
126.2 bits(269) 0.0 59/60(98%) 0/60(0%) Minus/Minus
Query      262  *HR*QTCANK*R*L*PV*KFDTG*TT*QFYSAPQQSVKSNILAIPKFEENLLPLTR*FVR  441
                *HR*QTCANK*R*L*PV*KFDTG*TT* FYSAPQQSVKSNILAIPKFEENLLPLTR*FVR
Subject  17257  *HR*QTCANK*R*L*PV*KFDTG*TT*HFYSAPQQSVKSNILAIPKFEENLLPLTR*FVR  17436

Range 18: 17503 to 17616 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.4 bits(191) 0.0 37/38(97%) 0/38(0%) Minus/Minus
Query      508  PLFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR  621
                P FYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR
Subject  17503  PFFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR  17616

Range 19: 9556 to 9654 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.5 bits(176) 0.0 33/33(100%) 0/33(0%) Minus/Plus
Query      927  YYVGYFGATPKVFPLCV*PLM*VSLFYFCLLGG  1025
                YYVGYFGATPKVFPLCV*PLM*VSLFYFCLLGG
Subject   9556  YYVGYFGATPKVFPLCV*PLM*VSLFYFCLLGG  9654

Range 20: 9558 to 9653 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.0 bits(166) 0.0 31/32(97%) 0/32(0%) Minus/Plus
Query      928  LRRLFWRYAKGFSSLCVAFNVGFFVLFLPFRR  1023
                LRRL WRYAKGFSSLCVAFNVGFFVLFLPFRR
Subject   9558  LRRLLWRYAKGFSSLCVAFNVGFFVLFLPFRR  9653

Range 21: 9558 to 9665 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.0 bits(164) 0.0 33/36(92%) 0/36(0%) Plus/Minus
Query      916  KLGQPPKRQK*NKETYIKGYTQRGKTFGVAPK*PT*  1023
                K   PPKRQK*NKETYIKGYTQRGKTFGVAPK*PT*
Subject   9558  KRNAPPKRQK*NKETYIKGYTQRGKTFGVAPK*PT*  9665

Range 22: 9556 to 9660 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.7 bits(161) 0.0 32/35(91%) 0/35(0%) Plus/Minus
Query      921  RSAA*KAKIKQRNLH*RLHTKRKNLWRSAKITYVI  1025
                + AA*KAKIKQRNLH*RLHTKRKNLWRSAK+TYVI
Subject   9556  KRAA*KAKIKQRNLH*RLHTKRKNLWRSAKVTYVI  9660

Range 23: 9557 to 9655 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.5 bits(152) 0.0 32/33(97%) 0/33(0%) Minus/Plus
Query      926  IT*VILALRQRFFLFVCSL*CRFLCFIFAF*AA  1024
                IT*V LALRQRFFLFVCSL*CRFLCFIFAF*AA
Subject   9557  IT*VTLALRQRFFLFVCSL*CRFLCFIFAF*AA  9655

Grapevine leafroll associated virus 3 isolate 3138 07, complete genome

Sequence ID: JX559645.1 Length: 18498 Number of Matches: 23

Range 1: 17577 to 18194 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
473.0 bits(1026) 0.0 202/206(98%) 0/206(0%) Minus/Minus
Query        3  PFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQQTISTANKHAQISSDNCNPFENLTLAEQHNNFIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVCLLLQLRPVRPELASCIC*CIDHLSIQDIFCFPSFHDTLRITPST**PPEHLPNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA  620
                PFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQ TISTANKHAQISSDNCNPFENLTLAEQHN FIVLRNKASRATS*RSRNLKRTYY *LDDSFVVCLLLQLRPVRPELASCIC*CID LSIQDIFCFPSFHDTLRITPST**PPEHLPNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA
Subject  17577  PFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQLTISTANKHAQISSDNCNPFENLTLAEQHNIFIVLRNKASRATS*RSRNLKRTYYR*LDDSFVVCLLLQLRPVRPELASCIC*CIDRLSIQDIFCFPSFHDTLRITPST**PPEHLPNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA  18194

Range 2: 18187 to 18498 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
240.3 bits(518) 0.0 102/104(98%) 0/104(0%) Minus/Minus
Query      614  DLTYCR*VSLVRGPPRSQTLIGFWRLLYYTNIISLSTLRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**FTDLPPF  925
                DLTYCR*VSLVRGPPRSQTLIGFWRLLYYTNIISLSTLRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**F DLP F
Subject  18187  DLTYCR*VSLVRGPPRSQTLIGFWRLLYYTNIISLSTLRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**FPDLPVF  18498

Range 3: 17576 to 18199 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
475.3 bits(1031) 0.0 203/208(98%) 0/208(0%) Plus/Plus
Query        2  LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEGADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL*NCYVVQPVSNFQTGYNYRYLFAHVC*RC*LFVVVEGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*KRGK  625
                LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVE ADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL* CYVVQPVSNFQTGYNYRYLFAHVC*RC*L VVVEGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*K G+
Subject  17576  LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEEADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL*KCYVVQPVSNFQTGYNYRYLFAHVC*RC*LLVVVEGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*KTGR  18199

Range 4: 18188 to 18496 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
215.1 bits(463) 0.0 101/103(98%) 0/103(0%) Plus/Plus
Query      615  KGGRSVNY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*YNKRQNPIKVWDLGGPLTRLTYRQ*VR  923
                K GRS NY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*YNKRQNPIKVWDLGGPLTRLTYRQ*VR
Subject  18188  KTGRSGNY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*YNKRQNPIKVWDLGGPLTRLTYRQ*VR  18496

Range 5: 17576 to 18190 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
421.7 bits(914) 0.0 200/205(98%) 0/205(0%) Minus/Minus
Query        2  FLHMLIRAYK**LXXXXXXXXXXXTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNNKQLAPLTNMRK*VAIIVTRLKI*HWLNNITIL*CSATKRQEQHPSDPEI*RELITTD*MIRS*YVCSFNCGQSGLS*HHVFVSALIT*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ  616
                FLHMLIRAYK**LINIPINVTPINTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNN QLAPLTNMRK*VAIIVTRLKI*HWLNNIT L*CSATKRQEQHPSDPEI*RELIT D*MIRS*YVC FNCGQSGLS*HHVFVSALI *VSKISFASPLSTTHFE*LHRLDDLQNIFRMFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ
Subject  17576  FLHMLIRAYK**LINIPINVTPINTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNN*QLAPLTNMRK*VAIIVTRLKI*HWLNNITFL*CSATKRQEQHPSDPEI*RELITAD*MIRS*YVCFFNCGQSGLS*HHVFVSALIA*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ  18190

Range 6: 18192 to 18497 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
227.4 bits(490) 0.0 101/102(99%) 0/102(0%) Minus/Minus
Query      619  T*LIVDKLAS*EARLGPKL*LDFGVYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEESLPINNSQTFP  924
                T*LIVDKLAS*EARLGPKL*LDFGVYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEESLPIN+SQTFP
Subject  18192  T*LIVDKLAS*EARLGPKL*LDFGVYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEESLPINSSQTFP  18497

Range 7: 17904 to 18191 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
222.4 bits(479) 0.0 94/96(98%) 0/96(0%) Plus/Plus
Query      330  *RFVAEHYKIVMLFSQCQIFKRVTIIATYLRMFVSGANCLLL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRK  617
                *RFVAEHYK VMLFSQCQIFKRVTIIATYLRMFVSGANC LL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRK
Subject  17904  *RFVAEHYKNVMLFSQCQIFKRVTIIATYLRMFVSGANC*LL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRK  18191

Range 8: 17577 to 17843 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
216.0 bits(465) 0.0 87/89(98%) 0/89(0%) Plus/Plus
Query        3  CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*VINALTNT*C*LRPDWPQLKEQTYYER  269
                CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIRKMFWRSSSRWSYSKCVVERGEAKDILDT* INALTNT*C*LRPDWPQLK+QTYYER
Subject  17577  CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*AINALTNT*C*LRPDWPQLKKQTYYER  17843

Range 9: 18174 to 18497 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
182.1 bits(391) 0.0 100/108(93%) 0/108(0%) Plus/Plus
Query      601  LAYVEKGEGL*IINR*RLFNKFEINKSKKNEXXXXXXXXXXXXCRIGYISR*DD*TLPHGLIL*YL*N*SVKSIVILY*YSIINAKIQLKFGT*AGLLRG*LIDNKLG  924
                ++   K EGL  INR*RLFNKFEINKSKKNEIIRLVFLFVFRFCRIGYISR*DD*TLPHGLIL*YL*N*SVKSIVILY*YSIINAKIQLKFGT*AGLLRG*LIDNKLG
Subject  18174  ISICRKREGLGTINR*RLFNKFEINKSKKNEIIRLVFLFVFRFCRIGYISR*DD*TLPHGLIL*YL*N*SVKSIVILY*YSIINAKIQLKFGT*AGLLRG*LIDNKLG  18497

Range 10: 17575 to 17796 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
169.7 bits(364) 0.0 73/74(99%) 0/74(0%) Plus/Plus
Query        1  AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFGRCSGGHQVDGVIRSVSWKEGKQKISWILK*SMH*QIHDAN  222
                AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFGRCSGGHQVDGVIRSVSWKEGKQKISWILK SMH*QIHDAN
Subject  17575  AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFGRCSGGHQVDGVIRSVSWKEGKQKISWILKRSMH*QIHDAN  17796

Range 11: 18322 to 18498 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
124.3 bits(265) 0.0 59/59(100%) 0/59(0%) Plus/Plus
Query      749  RGKMTKLYLTV*YSDICKISP*SR**YYISIV**TPKSN*SLGPRRASYEANLSTIS*V  925
                RGKMTKLYLTV*YSDICKISP*SR**YYISIV**TPKSN*SLGPRRASYEANLSTIS*V
Subject  18322  RGKMTKLYLTV*YSDICKISP*SR**YYISIV**TPKSN*SLGPRRASYEANLSTIS*V  18498

Range 12: 18043 to 18198 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
109.7 bits(233) 0.0 50/52(96%) 0/52(0%) Plus/Plus
Query      469  GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKGE  624
                GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVE G+
Subject  18043  GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVENGK  18198

Range 13: 17839 to 17982 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
100.0 bits(212) 0.0 46/48(96%) 0/48(0%) Plus/Plus
Query      265  NESSSQW**VLFKFRDR*DVALDALLRSTIKLLCCSASVKFSNGLQLS  408
                NESSSQ **VLFKFRDR*DVALDALLRSTIK+LCCSASVKFSNGLQLS
Subject  17839  NESSSQR**VLFKFRDR*DVALDALLRSTIKMLCCSASVKFSNGLQLS  17982

Range 14: 18187 to 18282 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
60.6 bits(126) 0.0 29/32(91%) 0/32(0%) Plus/Plus
Query      614  KRGKVCELLIGKDSSINLK*TKVRKMK*LG*S  709
                + GKV ELLIGKDSSINLK*TKVRKMK*LG*S
Subject  18187  ENGKVWELLIGKDSSINLK*TKVRKMK*LG*S  18282

Range 15: 18278 to 18496 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
164.6 bits(353) 0.0 73/73(100%) 0/73(0%) Minus/Minus
Query      705  PNLLSIS*PRKRPA*VPNFNWILAFIILY*YNITIDFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT  923
                PNLLSIS*PRKRPA*VPNFNWILAFIILY*YNITIDFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT
Subject  18278  PNLLSIS*PRKRPA*VPNFNWILAFIILY*YNITIDFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT  18496

Range 16: 17575 to 17796 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
132.6 bits(283) 0.0 74/74(100%) 0/74(0%) Minus/Minus
Query        1  VSIMYLLVH*SXXXXXXXXXXXXXRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS  222
                VSIMYLLVH*SLKYPRYLLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS
Subject  17575  VSIMYLLVH*SLKYPRYLLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS  17796

Range 17: 17836 to 18015 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
126.2 bits(269) 0.0 59/60(98%) 0/60(0%) Minus/Minus
Query      262  *HR*QTCANK*R*L*PV*KFDTG*TT*QFYSAPQQSVKSNILAIPKFEENLLPLTR*FVR  441
                *HR*QTCANK*R*L*PV*KFDTG*TT* FYSAPQQSVKSNILAIPKFEENLLPLTR*FVR
Subject  17836  *HR*QTCANK*R*L*PV*KFDTG*TT*HFYSAPQQSVKSNILAIPKFEENLLPLTR*FVR  18015

Range 18: 18082 to 18195 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.9 bits(192) 0.0 37/38(97%) 0/38(0%) Minus/Minus
Query      508  PLFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR  621
                P+FYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR
Subject  18082  PVFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR  18195

Range 19: 10135 to 10233 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.5 bits(176) 0.0 33/33(100%) 0/33(0%) Minus/Plus
Query      927  YYVGYFGATPKVFPLCV*PLM*VSLFYFCLLGG  1025
                YYVGYFGATPKVFPLCV*PLM*VSLFYFCLLGG
Subject  10135  YYVGYFGATPKVFPLCV*PLM*VSLFYFCLLGG  10233

Range 20: 10137 to 10232 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.0 bits(166) 0.0 31/32(97%) 0/32(0%) Minus/Plus
Query      928  LRRLFWRYAKGFSSLCVAFNVGFFVLFLPFRR  1023
                LRRL WRYAKGFSSLCVAFNVGFFVLFLPFRR
Subject  10137  LRRLLWRYAKGFSSLCVAFNVGFFVLFLPFRR  10232

Range 21: 10137 to 10244 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.0 bits(164) 0.0 33/36(92%) 0/36(0%) Plus/Minus
Query      916  KLGQPPKRQK*NKETYIKGYTQRGKTFGVAPK*PT*  1023
                K   PPKRQK*NKETYIKGYTQRGKTFGVAPK*PT*
Subject  10137  KRNAPPKRQK*NKETYIKGYTQRGKTFGVAPK*PT*  10244

Range 22: 10135 to 10239 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.7 bits(161) 0.0 32/35(91%) 0/35(0%) Plus/Minus
Query      921  RSAA*KAKIKQRNLH*RLHTKRKNLWRSAKITYVI  1025
                + AA*KAKIKQRNLH*RLHTKRKNLWRSAK+TYVI
Subject  10135  KRAA*KAKIKQRNLH*RLHTKRKNLWRSAKVTYVI  10239

Range 23: 10136 to 10234 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.5 bits(152) 0.0 32/33(97%) 0/33(0%) Minus/Plus
Query      926  IT*VILALRQRFFLFVCSL*CRFLCFIFAF*AA  1024
                IT*V LALRQRFFLFVCSL*CRFLCFIFAF*AA
Subject  10136  IT*VTLALRQRFFLFVCSL*CRFLCFIFAF*AA  10234

Grapevine leafroll associated virus 3 isolate WA MR, complete genome

Sequence ID: GU983863.1 Length: 18498 Number of Matches: 23

Range 1: 17577 to 18194 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
471.6 bits(1023) 0.0 201/206(98%) 0/206(0%) Minus/Minus
Query        3  PFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQQTISTANKHAQISSDNCNPFENLTLAEQHNNFIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVCLLLQLRPVRPELASCIC*CIDHLSIQDIFCFPSFHDTLRITPST**PPEHLPNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA  620
                PFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDA VYRYSDGFL*VPHRLLQQ TISTANKHAQISSDNCNPFENLTLA QH+ FIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVCLLLQLRPVRPELASCIC*CIDHLSIQDIFCFPSFHDTLRITPST**PPEHLPNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA
Subject  17577  PFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAKVYRYSDGFL*VPHRLLQQLTISTANKHAQISSDNCNPFENLTLAVQHDIFIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVCLLLQLRPVRPELASCIC*CIDHLSIQDIFCFPSFHDTLRITPST**PPEHLPNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA  18194

Range 2: 18187 to 18498 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
238.0 bits(513) 0.0 101/104(97%) 0/104(0%) Minus/Minus
Query      614  DLTYCR*VSLVRGPPRSQTLIGFWRLLYYTNIISLSTLRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**FTDLPPF  925
                DLTYCR*VSLVRGPPRSQTLIGFWRLLYYTNIISLSTLRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*R FTY**F DLP F
Subject  18187  DLTYCR*VSLVRGPPRSQTLIGFWRLLYYTNIISLSTLRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RAFTY**FPDLPLF  18498

Range 3: 17576 to 18199 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
479.4 bits(1040) 0.0 204/208(98%) 0/208(0%) Plus/Plus
Query        2  LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEGADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL*NCYVVQPVSNFQTGYNYRYLFAHVC*RC*LFVVVEGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*KRGK  625
                LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEGADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL* C+VVQPVSNFQTGYNYRYLFAHVC*RC*L VVVEGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*KRG+
Subject  17576  LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEGADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL*KCHVVQPVSNFQTGYNYRYLFAHVC*RC*LLVVVEGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*KRGR  18199

Range 4: 18188 to 18496 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
212.8 bits(458) 0.0 100/103(97%) 0/103(0%) Plus/Plus
Query      615  KGGRSVNY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*YNKRQNPIKVWDLGGPLTRLTYRQ*VR  923
                K GRS NY**VK LQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*YNKRQNPIKVWDLGGPLTRLTYRQ*VR
Subject  18188  KRGRSGNY**VKALQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*YNKRQNPIKVWDLGGPLTRLTYRQ*VR  18496

Range 5: 17576 to 18193 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
424.9 bits(921) 0.0 201/206(98%) 0/206(0%) Minus/Minus
Query        2  PFLHMLIRAYK**LXXXXXXXXXXXTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNNKQLAPLTNMRK*VAIIVTRLKI*HWLNNITIL*CSATKRQEQHPSDPEI*RELITTD*MIRS*YVCSFNCGQSGLS*HHVFVSALIT*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ  619
                PFLHMLIRAYK**LINIPINVTPINTSHPSQTSLRTTQ CIATLMGFSKCLIAFYNN QLAPLTNMRK*VAIIVTRLKI*HWL N+T L*CSATKRQEQHPSDPEI*RELITTD*MIRS*YVCSFNCGQSGLS*HHVFVSALIT*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ
Subject  17576  PFLHMLIRAYK**LINIPINVTPINTSHPSQTSLRTTQKCIATLMGFSKCLIAFYNN*QLAPLTNMRK*VAIIVTRLKI*HWLYNMTFL*CSATKRQEQHPSDPEI*RELITTD*MIRS*YVCSFNCGQSGLS*HHVFVSALIT*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ  18193

Range 6: 18192 to 18497 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
225.1 bits(485) 0.0 100/102(98%) 0/102(0%) Minus/Minus
Query      619  T*LIVDKLAS*EARLGPKL*LDFGVYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEESLPINNSQTFP  924
                T*LIVDKLAS*EARLGPKL*LDFGVYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEE LPIN+SQTFP
Subject  18192  T*LIVDKLAS*EARLGPKL*LDFGVYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEEPLPINSSQTFP  18497

Range 7: 17904 to 18194 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
221.9 bits(478) 0.0 93/97(96%) 0/97(0%) Plus/Plus
Query      330  *RFVAEHYKIVMLFSQCQIFKRVTIIATYLRMFVSGANCLLL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRKG  620
                *RFVAEHYK VML+SQCQIFKRVTIIATYLRMFVSGANC LL*KAMRHLEKPIRVAIH+CVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRKG
Subject  17904  *RFVAEHYKNVMLYSQCQIFKRVTIIATYLRMFVSGANC*LL*KAMRHLEKPIRVAIHFCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRKG  18194

Range 8: 17577 to 17843 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
219.6 bits(473) 0.0 89/89(100%) 0/89(0%) Plus/Plus
Query        3  CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*VINALTNT*C*LRPDWPQLKEQTYYER  269
                CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*VINALTNT*C*LRPDWPQLKEQTYYER
Subject  17577  CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*VINALTNT*C*LRPDWPQLKEQTYYER  17843

Range 9: 18174 to 18497 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
185.7 bits(399) 0.0 101/108(94%) 0/108(0%) Plus/Plus
Query      601  LAYVEKGEGL*IINR*RLFNKFEINKSKKNEXXXXXXXXXXXXCRIGYISR*DD*TLPHGLIL*YL*N*SVKSIVILY*YSIINAKIQLKFGT*AGLLRG*LIDNKLG  924
                ++   KGEGL  INR*RLFNKFEINKSKKNEIIRLVFLFVFRFCRIGYISR*DD*TLPHGLIL*YL*N*SVKSIVILY*YSIINAKIQLKFGT*AGLLRG*LIDNKLG
Subject  18174  ISICRKGEGLGTINR*RLFNKFEINKSKKNEIIRLVFLFVFRFCRIGYISR*DD*TLPHGLIL*YL*N*SVKSIVILY*YSIINAKIQLKFGT*AGLLRG*LIDNKLG  18497

Range 10: 17575 to 17796 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
172.0 bits(369) 0.0 74/74(100%) 0/74(0%) Plus/Plus
Query        1  AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFGRCSGGHQVDGVIRSVSWKEGKQKISWILK*SMH*QIHDAN  222
                AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFGRCSGGHQVDGVIRSVSWKEGKQKISWILK*SMH*QIHDAN
Subject  17575  AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFGRCSGGHQVDGVIRSVSWKEGKQKISWILK*SMH*QIHDAN  17796

Range 11: 18322 to 18498 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
124.3 bits(265) 0.0 59/59(100%) 0/59(0%) Plus/Plus
Query      749  RGKMTKLYLTV*YSDICKISP*SR**YYISIV**TPKSN*SLGPRRASYEANLSTIS*V  925
                RGKMTKLYLTV*YSDICKISP*SR**YYISIV**TPKSN*SLGPRRASYEANLSTIS*V
Subject  18322  RGKMTKLYLTV*YSDICKISP*SR**YYISIV**TPKSN*SLGPRRASYEANLSTIS*V  18498

Range 12: 18043 to 18198 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
110.1 bits(234) 0.0 50/52(96%) 0/52(0%) Plus/Plus
Query      469  GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKGE  624
                GT*RNPSE*RYT ASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKG+
Subject  18043  GT*RNPSE*RYTFASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKGK  18198

Range 13: 17839 to 17982 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
102.3 bits(217) 0.0 45/48(94%) 0/48(0%) Plus/Plus
Query      265  NESSSQW**VLFKFRDR*DVALDALLRSTIKLLCCSASVKFSNGLQLS  408
                NESSSQW**VLFKFRDR*DVALDALLRSTIK+ CC+ASVKFSNGLQLS
Subject  17839  NESSSQW**VLFKFRDR*DVALDALLRSTIKMSCCTASVKFSNGLQLS  17982

Range 14: 18187 to 18282 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.3 bits(121) 0.0 28/32(88%) 0/32(0%) Plus/Plus
Query      614  KRGKVCELLIGKDSSINLK*TKVRKMK*LG*S  709
                ++GKV ELLIGK SSINLK*TKVRKMK*LG*S
Subject  18187  EKGKVWELLIGKGSSINLK*TKVRKMK*LG*S  18282

Range 15: 18278 to 18496 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
164.6 bits(353) 0.0 73/73(100%) 0/73(0%) Minus/Minus
Query      705  PNLLSIS*PRKRPA*VPNFNWILAFIILY*YNITIDFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT  923
                PNLLSIS*PRKRPA*VPNFNWILAFIILY*YNITIDFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT
Subject  18278  PNLLSIS*PRKRPA*VPNFNWILAFIILY*YNITIDFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT  18496

Range 16: 17575 to 17796 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
132.6 bits(283) 0.0 74/74(100%) 0/74(0%) Minus/Minus
Query        1  VSIMYLLVH*SXXXXXXXXXXXXXRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS  222
                VSIMYLLVH*SLKYPRYLLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS
Subject  17575  VSIMYLLVH*SLKYPRYLLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS  17796

Range 17: 17836 to 18015 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.9 bits(264) 0.0 58/60(97%) 0/60(0%) Minus/Minus
Query      262  *HR*QTCANK*R*L*PV*KFDTG*TT*QFYSAPQQSVKSNILAIPKFEENLLPLTR*FVR  441
                *HR*QTCANK*R*L*PV*KFDTG TT* FYSAPQQSVKSNILAIPKFEENLLPLTR*FVR
Subject  17836  *HR*QTCANK*R*L*PV*KFDTGCTT*HFYSAPQQSVKSNILAIPKFEENLLPLTR*FVR  18015

Range 18: 18082 to 18195 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.3 bits(195) 0.0 38/38(100%) 0/38(0%) Minus/Minus
Query      508  PLFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR  621
                PLFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR
Subject  18082  PLFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR  18195

Range 19: 10135 to 10233 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.8 bits(170) 0.0 32/33(97%) 0/33(0%) Minus/Plus
Query      927  YYVGYFGATPKVFPLCV*PLM*VSLFYFCLLGG  1025
                YYVGYFGATPKVFPLCV*P M*VSLFYFCLLGG
Subject  10135  YYVGYFGATPKVFPLCV*PSM*VSLFYFCLLGG  10233

Range 20: 10137 to 10232 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.0 bits(166) 0.0 31/32(97%) 0/32(0%) Minus/Plus
Query      928  LRRLFWRYAKGFSSLCVAFNVGFFVLFLPFRR  1023
                LRRL WRYAKGFSSLCVAFNVGFFVLFLPFRR
Subject  10137  LRRLLWRYAKGFSSLCVAFNVGFFVLFLPFRR  10232

Range 21: 10135 to 10239 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.7 bits(161) 0.0 32/35(91%) 0/35(0%) Plus/Minus
Query      921  RSAA*KAKIKQRNLH*RLHTKRKNLWRSAKITYVI  1025
                + AA*KAKIKQRNLH*RLHTKRKNLWRSAK+TYVI
Subject  10135  KRAA*KAKIKQRNLH*RLHTKRKNLWRSAKVTYVI  10239

Range 22: 10137 to 10244 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.2 bits(160) 0.0 32/36(89%) 0/36(0%) Plus/Minus
Query      916  KLGQPPKRQK*NKETYIKGYTQRGKTFGVAPK*PT*  1023
                K   PPKRQK*NKETYI+GYTQRGKTFGVAPK*PT*
Subject  10137  KRNAPPKRQK*NKETYIEGYTQRGKTFGVAPK*PT*  10244

Range 23: 10136 to 10234 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.3 bits(147) 0.0 31/33(94%) 0/33(0%) Minus/Plus
Query      926  IT*VILALRQRFFLFVCSL*CRFLCFIFAF*AA  1024
                IT*V LALRQRFFLFVCSL CRFLCFIFAF*AA
Subject  10136  IT*VTLALRQRFFLFVCSLQCRFLCFIFAF*AA  10234

Grapevine leafroll associated virus 3 isolate 621, complete genome

Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 23

Range 1: 17577 to 18194 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
469.4 bits(1018) 0.0 201/206(98%) 0/206(0%) Minus/Minus
Query        3  PFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQQTISTANKHAQISSDNCNPFENLTLAEQHNNFIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVCLLLQLRPVRPELASCIC*CIDHLSIQDIFCFPSFHDTLRITPST**PPEHLPNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA  620
                PFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQ TISTANKH QISSDNCNPFENLTLAEQHN FIVLRNKASRATS*RSRNLKRTYYH*LDDSFVV LLLQLRPVRPELASCIC*CIDHLSI DIFCFPSFHDTLRITPST**PPEHLPNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA
Subject  17577  PFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQLTISTANKHVQISSDNCNPFENLTLAEQHNIFIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVYLLLQLRPVRPELASCIC*CIDHLSI*DIFCFPSFHDTLRITPST**PPEHLPNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA  18194

Range 2: 18187 to 18498 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
236.6 bits(510) 0.0 101/104(97%) 0/104(0%) Minus/Minus
Query      614  DLTYCR*VSLVRGPPRSQTLIGFWRLLYYTNIISLSTLRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**FTDLPPF  925
                DLTYCR*VSL RGPPRSQTLIGFWRLLYYTNIISLSTLRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**F DLP F
Subject  18187  DLTYCR*VSLERGPPRSQTLIGFWRLLYYTNIISLSTLRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**FPDLPFF  18498

Range 3: 17576 to 18199 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
476.7 bits(1034) 0.0 203/208(98%) 0/208(0%) Plus/Plus
Query        2  LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEGADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL*NCYVVQPVSNFQTGYNYRYLFAHVC*RC*LFVVVEGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*KRGK  625
                LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKRYL YLSDQCTNKYMMLTQAGLAAVEGADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL* CYVVQPVSNFQTGYNYRYLFAHVC*RC*L VVVEGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*K+G+
Subject  17576  LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKRYLRYLSDQCTNKYMMLTQAGLAAVEGADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL*KCYVVQPVSNFQTGYNYRYLFAHVC*RC*LLVVVEGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*KKGR  18199

Range 4: 18188 to 18496 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
213.2 bits(459) 0.0 100/103(97%) 0/103(0%) Plus/Plus
Query      615  KGGRSVNY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*YNKRQNPIKVWDLGGPLTRLTYRQ*VR  923
                K GRS NY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*YNKRQNPIKVWDLGGPL+RLTYRQ*VR
Subject  18188  KKGRSGNY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*YNKRQNPIKVWDLGGPLSRLTYRQ*VR  18496

Range 5: 17576 to 18190 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
424.9 bits(921) 0.0 201/205(98%) 0/205(0%) Minus/Minus
Query        2  FLHMLIRAYK**LXXXXXXXXXXXTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNNKQLAPLTNMRK*VAIIVTRLKI*HWLNNITIL*CSATKRQEQHPSDPEI*RELITTD*MIRS*YVCSFNCGQSGLS*HHVFVSALIT*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ  616
                FLHMLIRAYK**LINIPINVTPINTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNN QLAPLTNM K*VAIIVTRLKI*HWLNNIT L*CSATKRQEQHPSDPEI*RELITTD*MIRS*Y+CSFNCGQSGLS*HHVFVSALIT*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ
Subject  17576  FLHMLIRAYK**LINIPINVTPINTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNN*QLAPLTNMCK*VAIIVTRLKI*HWLNNITFL*CSATKRQEQHPSDPEI*RELITTD*MIRS*YICSFNCGQSGLS*HHVFVSALIT*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ  18190

Range 6: 18192 to 18497 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
223.8 bits(482) 0.0 99/102(97%) 0/102(0%) Minus/Minus
Query      619  T*LIVDKLAS*EARLGPKL*LDFGVYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEESLPINNSQTFP  924
                T*LIVD+LAS EARLGPKL*LDFGVYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEESLPIN+SQTFP
Subject  18192  T*LIVDRLASKEARLGPKL*LDFGVYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEESLPINSSQTFP  18497

Range 7: 17904 to 18191 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
220.1 bits(474) 0.0 93/96(97%) 0/96(0%) Plus/Plus
Query      330  *RFVAEHYKIVMLFSQCQIFKRVTIIATYLRMFVSGANCLLL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRK  617
                *RFVAEHYK VMLFSQCQIFKRVTIIATYL MFVSGANC LL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRK
Subject  17904  *RFVAEHYKNVMLFSQCQIFKRVTIIATYLHMFVSGANC*LL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRK  18191

Range 8: 17577 to 17843 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
216.9 bits(467) 0.0 88/89(99%) 0/89(0%) Plus/Plus
Query        3  CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*VINALTNT*C*LRPDWPQLKEQTYYER  269
                CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*VINALTNT*C*LRPDWPQLKEQ YYER
Subject  17577  CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*VINALTNT*C*LRPDWPQLKEQIYYER  17843

Range 9: 18174 to 18497 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
177.0 bits(380) 0.0 98/108(91%) 0/108(0%) Plus/Plus
Query      601  LAYVEKGEGL*IINR*RLFNKFEINKSKKNEXXXXXXXXXXXXCRIGYISR*DD*TLPHGLIL*YL*N*SVKSIVILY*YSIINAKIQLKFGT*AGLLRG*LIDNKLG  924
                ++   K EGL  INR*RLFNKFEINKSKKNEIIRLVFLFVFRFCRIGYISR*DD*TLPHGLIL*YL*N*SVKSIVILY*YSIINAKIQLKFGT*AGL RG* IDNKLG
Subject  18174  ISICRKREGLGTINR*RLFNKFEINKSKKNEIIRLVFLFVFRFCRIGYISR*DD*TLPHGLIL*YL*N*SVKSIVILY*YSIINAKIQLKFGT*AGLFRG*PIDNKLG  18497

Range 10: 17575 to 17796 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
165.1 bits(354) 0.0 73/74(99%) 0/74(0%) Plus/Plus
Query        1  AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFGRCSGGHQVDGVIRSVSWKEGKQKISWILK*SMH*QIHDAN  222
                AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFGRCSGGHQVDGVIRSVSWKEGKQKIS ILK*SMH*QIHDAN
Subject  17575  AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFGRCSGGHQVDGVIRSVSWKEGKQKIS*ILK*SMH*QIHDAN  17796

Range 11: 18322 to 18498 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
122.5 bits(261) 0.0 58/59(98%) 0/59(0%) Plus/Plus
Query      749  RGKMTKLYLTV*YSDICKISP*SR**YYISIV**TPKSN*SLGPRRASYEANLSTIS*V  925
                RGKMTKLYLTV*YSDICKISP*SR**YYISIV**TPKSN*SLGPRRAS+EANLSTIS*V
Subject  18322  RGKMTKLYLTV*YSDICKISP*SR**YYISIV**TPKSN*SLGPRRASFEANLSTIS*V  18498

Range 12: 18043 to 18198 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.0 bits(238) 0.0 51/52(98%) 0/52(0%) Plus/Plus
Query      469  GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKGE  624
                GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKG+
Subject  18043  GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKGK  18198

Range 13: 17839 to 17982 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.5 bits(226) 0.0 47/48(98%) 0/48(0%) Plus/Plus
Query      265  NESSSQW**VLFKFRDR*DVALDALLRSTIKLLCCSASVKFSNGLQLS  408
                NESSSQW**VLFKFRDR*DVALDALLRSTIK+LCCSASVKFSNGLQLS
Subject  17839  NESSSQW**VLFKFRDR*DVALDALLRSTIKMLCCSASVKFSNGLQLS  17982

Range 14: 18187 to 18282 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.6 bits(128) 0.0 29/32(91%) 0/32(0%) Plus/Plus
Query      614  KRGKVCELLIGKDSSINLK*TKVRKMK*LG*S  709
                ++GKV ELLIGKDSSINLK*TKVRKMK*LG*S
Subject  18187  EKGKVWELLIGKDSSINLK*TKVRKMK*LG*S  18282

Range 15: 18278 to 18496 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
162.8 bits(349) 0.0 72/73(99%) 0/73(0%) Minus/Minus
Query      705  PNLLSIS*PRKRPA*VPNFNWILAFIILY*YNITIDFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT  923
                PNLLSI *PRKRPA*VPNFNWILAFIILY*YNITIDFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT
Subject  18278  PNLLSIG*PRKRPA*VPNFNWILAFIILY*YNITIDFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT  18496

Range 16: 17575 to 17796 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
132.6 bits(283) 0.0 73/74(99%) 0/74(0%) Minus/Minus
Query        1  VSIMYLLVH*SXXXXXXXXXXXXXRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS  222
                VSIMYLLVH*SLKY RYLLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS
Subject  17575  VSIMYLLVH*SLKYLRYLLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS  17796

Range 17: 17836 to 18015 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
126.2 bits(269) 0.0 59/60(98%) 0/60(0%) Minus/Minus
Query      262  *HR*QTCANK*R*L*PV*KFDTG*TT*QFYSAPQQSVKSNILAIPKFEENLLPLTR*FVR  441
                *HR*QTCANK*R*L*PV*KFDTG*TT* FYSAPQQSVKSNILAIPKFEENLLPLTR*FVR
Subject  17836  *HR*QTCANK*R*L*PV*KFDTG*TT*HFYSAPQQSVKSNILAIPKFEENLLPLTR*FVR  18015

Range 18: 18082 to 18195 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.4 bits(191) 0.0 37/38(97%) 0/38(0%) Minus/Minus
Query      508  PLFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR  621
                P FYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR
Subject  18082  PFFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR  18195

Range 19: 10135 to 10233 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.5 bits(176) 0.0 33/33(100%) 0/33(0%) Minus/Plus
Query      927  YYVGYFGATPKVFPLCV*PLM*VSLFYFCLLGG  1025
                YYVGYFGATPKVFPLCV*PLM*VSLFYFCLLGG
Subject  10135  YYVGYFGATPKVFPLCV*PLM*VSLFYFCLLGG  10233

Range 20: 10137 to 10232 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.0 bits(166) 0.0 31/32(97%) 0/32(0%) Minus/Plus
Query      928  LRRLFWRYAKGFSSLCVAFNVGFFVLFLPFRR  1023
                LRRL WRYAKGFSSLCVAFNVGFFVLFLPFRR
Subject  10137  LRRLLWRYAKGFSSLCVAFNVGFFVLFLPFRR  10232

Range 21: 10137 to 10244 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.0 bits(164) 0.0 33/36(92%) 0/36(0%) Plus/Minus
Query      916  KLGQPPKRQK*NKETYIKGYTQRGKTFGVAPK*PT*  1023
                K   PPKRQK*NKETYIKGYTQRGKTFGVAPK*PT*
Subject  10137  KRNAPPKRQK*NKETYIKGYTQRGKTFGVAPK*PT*  10244

Range 22: 10135 to 10239 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.7 bits(161) 0.0 32/35(91%) 0/35(0%) Plus/Minus
Query      921  RSAA*KAKIKQRNLH*RLHTKRKNLWRSAKITYVI  1025
                + AA*KAKIKQRNLH*RLHTKRKNLWRSAK+TYVI
Subject  10135  KRAA*KAKIKQRNLH*RLHTKRKNLWRSAKVTYVI  10239

Range 23: 10136 to 10234 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.5 bits(152) 0.0 32/33(97%) 0/33(0%) Minus/Plus
Query      926  IT*VILALRQRFFLFVCSL*CRFLCFIFAF*AA  1024
                IT*V LALRQRFFLFVCSL*CRFLCFIFAF*AA
Subject  10136  IT*VTLALRQRFFLFVCSL*CRFLCFIFAF*AA  10234

Nucleotide Sequence (583 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
59
118
177
236
295
354
413
472
531
583

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
261.8 1827.9 59% 2.147e-97 43% GU983863.1
264.5 1835.2 68% 2.147e-97 43% GQ352631.1
261.8 1835.2 68% 4.009e-97 45% JX559645.1
258.6 1670.9 66% 1.762e-89 45% KX756669.1
120.2 796.0 54% 1.287e-39 29% EU259806.1

Alignments

Grapevine leafroll associated virus 3 isolate WA MR, complete genome

Sequence ID: GU983863.1 Length: 18498 Number of Matches: 28

Range 1: 203 to 535 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
247.1 bits(533) 0.0 110/111(99%) 0/111(0%) Plus/Minus
Query      154  NIFKLVKENYEKTENKALKENDVFSFLKGKF*KLN*PNTTMRTNPLKRRLGRVKT*DAEAQRKLNTNLNRL*ES**LLNTKHQKEKRKILLF*RKVNDYKTRNPNKRKEIF  486
                NIFKLVKENYEKTENKALKENDVFSFLKGKF*KLN*PNTTMRTNPLKRRLGRVKT*DAEAQRKLNTNLNRL*ES**LLNTKHQKEKRKILLF*RKVNDYKTRNPNKRKE F
Subject    203  NIFKLVKENYEKTENKALKENDVFSFLKGKF*KLN*PNTTMRTNPLKRRLGRVKT*DAEAQRKLNTNLNRL*ES**LLNTKHQKEKRKILLF*RKVNDYKTRNPNKRKEKF  535

Range 2: 579 to 686 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.5 bits(165) 0.0 36/36(100%) 0/36(0%) Plus/Minus
Query        3  RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*VLLR  110
                RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*VLLR
Subject    579  RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*VLLR  686

Range 3: 514 to 591 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.2 bits(112) 0.0 25/26(96%) 0/26(0%) Plus/Minus
Query       98  GVT*ENRKSEH*D*RKLKEIFLNL*R  175
                GVT*ENRKS+H*D*RKLKEIFLNL*R
Subject    514  GVT*ENRKSKH*D*RKLKEIFLNL*R  591

Range 4: 160 to 219 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
33.1 bits(66) 0.0 13/20(65%) 0/20(0%) Plus/Minus
Query      472  RKEIFFVIFKENYNRNY*QQ  531
                R++  FVI KENYN+NY*+Q
Subject    160  REKKNFVILKENYNKNY*RQ  219

Range 5: 108 to 140 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.0 bits(46) 0.0 9/11(82%) 0/11(0%) Plus/Minus
Query      551  FCFCLGKTKT*  583
                FCF LGK KT*
Subject    108  FCFSLGKVKT*  140

Range 6: 202 to 534 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
261.8 bits(565) 0.0 109/111(98%) 0/111(0%) Minus/Plus
Query      155  KRFLFSYWGFVFCSH*LSFKITKFFSSLFGVSCLVVINFPRVCLGSCLVFSALPRLKF*LFLSVF*EGWFSSSCWVNLVFKISLLKKKKRHFLLVLCFPFFRSFPSQV*KY  487
                K FLFSYWGFVFCSH*LSFKITKFFSSLFGVSCLVVINFPRVCLGSCLVFSALPRLKF*LFLSVF*EGWFS SCWVNLVFKISLLKKKKRHFLLVLCFPFFRSFPSQV*KY
Subject    202  KIFLFSYWGFVFCSH*LSFKITKFFSSLFGVSCLVVINFPRVCLGSCLVFSALPRLKF*LFLSVF*EGWFSLSCWVNLVFKISLLKKKKRHFLLVLCFPFFRSFPSQV*KY  534

Range 7: 644 to 688 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.0 bits(70) 0.0 15/15(100%) 0/15(0%) Minus/Plus
Query        1  PAV*GKFALLLPSSF  45
                PAV*GKFALLLPSSF
Subject    644  PAV*GKFALLLPSSF  688

Range 8: 579 to 620 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
32.2 bits(64) 0.0 14/14(100%) 0/14(0%) Minus/Plus
Query       69  PK*HLGIST*DSTS  110
                PK*HLGIST*DSTS
Subject    579  PK*HLGIST*DSTS  620

Range 9: 195 to 533 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
215.1 bits(463) 0.0 107/113(95%) 0/113(0%) Plus/Minus
Query      156  YF*TCEGKLRKNGKQSTXXXXXXXXXXXEILKTKLTQHDDENQPS*KTLRKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKES**LQNTKPQ*EKRNLFCY  494
                YF*TCEGKLRKNGKQSTKRK*RFFFFKREILKTKLTQHD+ENQPS*KTLRKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKES**LQNTKPQ*EKR +  +
Subject    195  YF*TCEGKLRKNGKQSTKRK*RFFFFKREILKTKLTQHDNENQPS*KTLRKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKES**LQNTKPQ*EKRKILLF  533

Range 10: 643 to 687 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.0 bits(81) 0.0 15/15(100%) 0/15(0%) Plus/Minus
Query        2  KDDGRRRANFPQTAG  46
                KDDGRRRANFPQTAG
Subject    643  KDDGRRRANFPQTAG  687

Range 11: 578 to 598 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
22.1 bits(42) 0.0 7/7(100%) 0/7(0%) Plus/Minus
Query       91  IPRCYLG  111
                IPRCYLG
Subject    578  IPRCYLG  598

Range 12: 201 to 293 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.0 bits(140) 0.0 28/31(90%) 0/31(0%) Minus/Plus
Query      396  KKISFLLLGFRVL*SLTFL*NNKIFLFSFWC  488
                +  SFLLLGFRVL*SLTFL*NNKIFLFSFWC
Subject    201  QNFSFLLLGFRVL*SLTFL*NNKIFLFSFWC  293

Range 13: 377 to 469 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
66.1 bits(138) 0.0 30/31(97%) 0/31(0%) Minus/Plus
Query      220  NSS*ASFKRVGSHRRVGLI*FLKFPF*KRKN  312
                NSS*ASFKRVGSH RVGLI*FLKFPF*KRKN
Subject    377  NSS*ASFKRVGSHCRVGLI*FLKFPF*KRKN  469

Range 14: 586 to 687 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
43.7 bits(89) 0.0 34/34(100%) 0/34(0%) Minus/Plus
Query        2  NT*EFLPKIQXXXXXXXXXXXXLREVCPSSSVVL  103
                NT*EFLPKIQLLSFSSFKFSCCLREVCPSSSVVL
Subject    586  NT*EFLPKIQLLSFSSFKFSCCLREVCPSSSVVL  687

Range 15: 354 to 389 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.1 bits(55) 0.0 12/12(100%) 0/12(0%) Minus/Plus
Query      300  CASAS*VLTLPK  335
                CASAS*VLTLPK
Subject    354  CASAS*VLTLPK  389

Range 16: 196 to 327 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
104.6 bits(222) 0.0 41/44(93%) 0/44(0%) Plus/Minus
Query      362  DSRKVNNY*TRNTKKRREKFCYFKGKLMTTKHETPIREKKSFLL  493
                DSRKVNNY*TRNTKKRREKFCYFKGKLMTTKHETPIREKK+F++
Subject    196  DSRKVNNY*TRNTKKRREKFCYFKGKLMTTKHETPIREKKNFVI  327

Range 17: 644 to 688 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.2 bits(77) 0.0 15/15(100%) 0/15(0%) Plus/Minus
Query        1  EGRRKKKGKLPSNSR  45
                EGRRKKKGKLPSNSR
Subject    644  EGRRKKKGKLPSNSR  688

Range 18: 203 to 271 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.9 bits(107) 0.0 22/23(96%) 0/23(0%) Minus/Plus
Query      418  KDFFSLIGVSCFVVINFPLK*QN  486
                K FFSLIGVSCFVVINFPLK*QN
Subject    203  KFFFSLIGVSCFVVINFPLK*QN  271

Range 19: 432 to 470 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
33.6 bits(67) 0.0 13/13(100%) 0/13(0%) Minus/Plus
Query      219  FSF*NFPFKKEKT  257
                FSF*NFPFKKEKT
Subject    432  FSF*NFPFKKEKT  470

Range 20: 654 to 686 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.9 bits(61) 0.0 11/11(100%) 0/11(0%) Minus/Plus
Query        3  EGSLPFFFRRP  35
                EGSLPFFFRRP
Subject    654  EGSLPFFFRRP  686

Range 21: 138 to 332 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.9 bits(107) 0.0 31/65(48%) 0/65(0%) Plus/Minus
Query      292  KRRLGRVKT*DAEAQRKLNTNLNRL*ES**LLNTKHQKEKRKILLF*RKVNDYKTRNPNKRKEIF  486
                K+ LG++ T   E  ++   N   L ES**L NTK Q EKRKILLF*RK+    T +  K K +F
Subject    138  KQTLGKLITTKHETPKREEKNFVILKES**LQNTKPQ*EKRKILLF*RKITIKTTNDS*KEKFLF  332

Range 22: 403 to 432 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.0 bits(46) 0.0 9/10(90%) 0/10(0%) Plus/Minus
Query      257  INPTRR*EPT  286
                INPTR+*EPT
Subject    403  INPTRQ*EPT  432

Range 23: 182 to 256 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.6 bits(102) 0.0 21/25(84%) 0/25(0%) Minus/Plus
Query      368  *LSFKITKFFSSLFGVSCLVVINFP  442
                * SFKITKFF SL GVSC VVINFP
Subject    182  *FSFKITKFFFSLIGVSCFVVINFP  256

Range 24: 147 to 206 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
22.1 bits(42) 0.0 11/20(55%) 0/20(0%) Minus/Plus
Query      418  FSLIGVSCFVVINFPLK*QN  477
                F L  V      NFPLK*QN
Subject    147  FFLSAVVSSFYCNFPLK*QN  206

Range 25: 182 to 256 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.8 bits(109) 0.0 20/25(80%) 0/25(0%) Plus/Minus
Query      368  RKVNNY*TRNTKKRREKFCYFKGKL  442
                RKVN+Y TRN  KR+EKFCYFKGKL
Subject    182  RKVNDYKTRNPNKRKEKFCYFKGKL  256

Range 26: 184 to 384 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.4 bits(108) 0.0 29/67(43%) 0/67(0%) Plus/Minus
Query      240  EILKTKLTQHDDENQPS*KTLRKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKES  440
                E LK K  +  +    +*   RK  N    + +K + +     GKL+TTKHETP RE+KNFVILKE+
Subject    184  EELKLKTRKRREN*TRT*TDSRKVNNY*TRNTKKRREKFCYFKGKLMTTKHETPIREKKNFVILKEN  384

Range 27: 261 to 320 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
39.1 bits(79) 0.0 14/20(70%) 0/20(0%) Plus/Minus
Query      434  GKLMTTKHETPIREKKSFLL  493
                GKL+TTKHETP RE+K+F++
Subject    261  GKLITTKHETPKREEKNFVI  320

Range 28: 167 to 220 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.6 bits(56) 0.0 11/18(61%) 0/18(0%) Plus/Minus
Query      471  EKRNLFCYF*GKLQQKLL  524
                +++  FCYF GKLQ KLL
Subject    167  KRKEKFCYFKGKLQ*KLL  220

Grapevine leafroll associated virus 3 isolate 621, complete genome

Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 28

Range 1: 203 to 535 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
245.8 bits(530) 0.0 109/111(98%) 0/111(0%) Plus/Minus
Query      154  NIFKLVKENYEKTENKALKENDVFSFLKGKF*KLN*PNTTMRTNPLKRRLGRVKT*DAEAQRKLNTNLNRL*ES**LLNTKHQKEKRKILLF*RKVNDYKTRNPNKRKEIF  486
                NIFKLVKENYEKTENKALKENDVFSFLKGKF*KLN*PNTTMRTNPLKRRLG+VKT*DAEAQRKLNTNLNRL*ES**LLNTKHQKEKRKILLF*RKVNDYKTRNPNKRKE F
Subject    203  NIFKLVKENYEKTENKALKENDVFSFLKGKF*KLN*PNTTMRTNPLKRRLGKVKT*DAEAQRKLNTNLNRL*ES**LLNTKHQKEKRKILLF*RKVNDYKTRNPNKRKEKF  535

Range 2: 579 to 686 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.5 bits(165) 0.0 36/36(100%) 0/36(0%) Plus/Minus
Query        3  RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*VLLR  110
                RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*VLLR
Subject    579  RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*VLLR  686

Range 3: 514 to 591 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.2 bits(112) 0.0 25/26(96%) 0/26(0%) Plus/Minus
Query       98  GVT*ENRKSEH*D*RKLKEIFLNL*R  175
                GVT*ENRKS+H*D*RKLKEIFLNL*R
Subject    514  GVT*ENRKSKH*D*RKLKEIFLNL*R  591

Range 4: 160 to 219 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
33.1 bits(66) 0.0 13/20(65%) 0/20(0%) Plus/Minus
Query      472  RKEIFFVIFKENYNRNY*QQ  531
                R++  FVI KENYN+NY*+Q
Subject    160  REKKNFVILKENYNKNY*RQ  219

Range 5: 108 to 146 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.4 bits(49) 0.0 10/13(77%) 0/13(0%) Plus/Minus
Query      545  IYFCFCLGKTKT*  583
                I FCF LGK KT*
Subject    108  ILFCFSLGKVKT*  146

Range 6: 202 to 534 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
264.5 bits(571) 0.0 110/111(99%) 0/111(0%) Minus/Plus
Query      155  KRFLFSYWGFVFCSH*LSFKITKFFSSLFGVSCLVVINFPRVCLGSCLVFSALPRLKF*LFLSVF*EGWFSSSCWVNLVFKISLLKKKKRHFLLVLCFPFFRSFPSQV*KY  487
                K FLFSYWGFVFCSH*LSFKITKFFSSLFGVSCLVVINFPRVCLGSCLVFSALPRLKF*LFLSVF*EGWFSSSCWVNLVFKISLLKKKKRHFLLVLCFPFFRSFPSQV*KY
Subject    202  KIFLFSYWGFVFCSH*LSFKITKFFSSLFGVSCLVVINFPRVCLGSCLVFSALPRLKF*LFLSVF*EGWFSSSCWVNLVFKISLLKKKKRHFLLVLCFPFFRSFPSQV*KY  534

Range 7: 644 to 688 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.0 bits(70) 0.0 15/15(100%) 0/15(0%) Minus/Plus
Query        1  PAV*GKFALLLPSSF  45
                PAV*GKFALLLPSSF
Subject    644  PAV*GKFALLLPSSF  688

Range 8: 579 to 620 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
32.2 bits(64) 0.0 14/14(100%) 0/14(0%) Minus/Plus
Query       69  PK*HLGIST*DSTS  110
                PK*HLGIST*DSTS
Subject    579  PK*HLGIST*DSTS  620

Range 9: 195 to 533 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
217.3 bits(468) 0.0 108/113(96%) 0/113(0%) Plus/Minus
Query      156  YF*TCEGKLRKNGKQSTXXXXXXXXXXXEILKTKLTQHDDENQPS*KTLRKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKES**LQNTKPQ*EKRNLFCY  494
                YF*TCEGKLRKNGKQSTKRK*RFFFFKREILKTKLTQHDDENQPS*KTLRKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKES**LQNTKPQ*EKR +  +
Subject    195  YF*TCEGKLRKNGKQSTKRK*RFFFFKREILKTKLTQHDDENQPS*KTLRKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKES**LQNTKPQ*EKRKILLF  533

Range 10: 643 to 687 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.0 bits(81) 0.0 15/15(100%) 0/15(0%) Plus/Minus
Query        2  KDDGRRRANFPQTAG  46
                KDDGRRRANFPQTAG
Subject    643  KDDGRRRANFPQTAG  687

Range 11: 578 to 598 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
22.1 bits(42) 0.0 7/7(100%) 0/7(0%) Plus/Minus
Query       91  IPRCYLG  111
                IPRCYLG
Subject    578  IPRCYLG  598

Range 12: 201 to 293 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.0 bits(140) 0.0 28/31(90%) 0/31(0%) Minus/Plus
Query      396  KKISFLLLGFRVL*SLTFL*NNKIFLFSFWC  488
                +  SFLLLGFRVL*SLTFL*NNKIFLFSFWC
Subject    201  QNFSFLLLGFRVL*SLTFL*NNKIFLFSFWC  293

Range 13: 377 to 469 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.0 bits(140) 0.0 30/31(97%) 0/31(0%) Minus/Plus
Query      220  NSS*ASFKRVGSHRRVGLI*FLKFPF*KRKN  312
                N S*ASFKRVGSHRRVGLI*FLKFPF*KRKN
Subject    377  NFS*ASFKRVGSHRRVGLI*FLKFPF*KRKN  469

Range 14: 586 to 687 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
43.7 bits(89) 0.0 34/34(100%) 0/34(0%) Minus/Plus
Query        2  NT*EFLPKIQXXXXXXXXXXXXLREVCPSSSVVL  103
                NT*EFLPKIQLLSFSSFKFSCCLREVCPSSSVVL
Subject    586  NT*EFLPKIQLLSFSSFKFSCCLREVCPSSSVVL  687

Range 15: 354 to 389 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
26.3 bits(51) 0.0 11/12(92%) 0/12(0%) Minus/Plus
Query      300  CASAS*VLTLPK  335
                CASAS*VLT PK
Subject    354  CASAS*VLTFPK  389

Range 16: 196 to 327 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
104.6 bits(222) 0.0 41/44(93%) 0/44(0%) Plus/Minus
Query      362  DSRKVNNY*TRNTKKRREKFCYFKGKLMTTKHETPIREKKSFLL  493
                DSRKVNNY*TRNTKKRREKFCYFKGKLMTTKHETPIREKK+F++
Subject    196  DSRKVNNY*TRNTKKRREKFCYFKGKLMTTKHETPIREKKNFVI  327

Range 17: 644 to 688 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.2 bits(77) 0.0 15/15(100%) 0/15(0%) Plus/Minus
Query        1  EGRRKKKGKLPSNSR  45
                EGRRKKKGKLPSNSR
Subject    644  EGRRKKKGKLPSNSR  688

Range 18: 403 to 432 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.8 bits(50) 0.0 10/10(100%) 0/10(0%) Plus/Minus
Query      257  INPTRR*EPT  286
                INPTRR*EPT
Subject    403  INPTRR*EPT  432

Range 19: 203 to 271 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.9 bits(107) 0.0 22/23(96%) 0/23(0%) Minus/Plus
Query      418  KDFFSLIGVSCFVVINFPLK*QN  486
                K FFSLIGVSCFVVINFPLK*QN
Subject    203  KFFFSLIGVSCFVVINFPLK*QN  271

Range 20: 432 to 470 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
33.6 bits(67) 0.0 13/13(100%) 0/13(0%) Minus/Plus
Query      219  FSF*NFPFKKEKT  257
                FSF*NFPFKKEKT
Subject    432  FSF*NFPFKKEKT  470

Range 21: 654 to 686 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.9 bits(61) 0.0 11/11(100%) 0/11(0%) Minus/Plus
Query        3  EGSLPFFFRRP  35
                EGSLPFFFRRP
Subject    654  EGSLPFFFRRP  686

Range 22: 134 to 256 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.2 bits(112) 0.0 24/41(59%) 0/41(0%) Plus/Minus
Query      368  RKVNNY*TRNTKKRREKFCYFKGKLMTTKHETPIREKKSFL  490
                RKVN+Y TRN  KR+EKFCYFKGKL      T  R+K  F+
Subject    134  RKVNDYKTRNPNKRKEKFCYFKGKLQ*KLLTTAERKKFYFV  256

Range 23: 182 to 256 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.6 bits(102) 0.0 21/25(84%) 0/25(0%) Minus/Plus
Query      368  *LSFKITKFFSSLFGVSCLVVINFP  442
                * SFKITKFF SL GVSC VVINFP
Subject    182  *FSFKITKFFFSLIGVSCFVVINFP  256

Range 24: 147 to 206 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
22.1 bits(42) 0.0 11/20(55%) 0/20(0%) Minus/Plus
Query      418  FSLIGVSCFVVINFPLK*QN  477
                F L  V      NFPLK*QN
Subject    147  FFLSAVVSSFYCNFPLK*QN  206

Range 25: 184 to 384 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.4 bits(108) 0.0 29/67(43%) 0/67(0%) Plus/Minus
Query      240  EILKTKLTQHDDENQPS*KTLRKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKES  440
                E LK K  +  +    +*   RK  N    + +K + +     GKL+TTKHETP RE+KNFVILKE+
Subject    184  EKLKLKTRKRREN*TRT*TDSRKVNNY*TRNTKKRREKFCYFKGKLMTTKHETPIREKKNFVILKEN  384

Range 26: 138 to 332 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.9 bits(107) 0.0 31/65(48%) 0/65(0%) Plus/Minus
Query      292  KRRLGRVKT*DAEAQRKLNTNLNRL*ES**LLNTKHQKEKRKILLF*RKVNDYKTRNPNKRKEIF  486
                K+ LG++ T   E  ++   N   L ES**L NTK Q EKRKILLF*RK+    T +  K K +F
Subject    138  KQTLGKLITTKHETPKREEKNFVILKES**LQNTKPQ*EKRKILLF*RKITIKTTNDS*KEKILF  332

Range 27: 261 to 320 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
39.1 bits(79) 0.0 14/20(70%) 0/20(0%) Plus/Minus
Query      434  GKLMTTKHETPIREKKSFLL  493
                GKL+TTKHETP RE+K+F++
Subject    261  GKLITTKHETPKREEKNFVI  320

Range 28: 167 to 220 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.6 bits(56) 0.0 11/18(61%) 0/18(0%) Plus/Minus
Query      471  EKRNLFCYF*GKLQQKLL  524
                +++  FCYF GKLQ KLL
Subject    167  KRKEKFCYFKGKLQ*KLL  220

Grapevine leafroll associated virus 3 isolate 3138 07, complete genome

Sequence ID: JX559645.1 Length: 18498 Number of Matches: 28

Range 1: 203 to 535 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
244.8 bits(528) 0.0 109/111(98%) 0/111(0%) Plus/Minus
Query      154  NIFKLVKENYEKTENKALKENDVFSFLKGKF*KLN*PNTTMRTNPLKRRLGRVKT*DAEAQRKLNTNLNRL*ES**LLNTKHQKEKRKILLF*RKVNDYKTRNPNKRKEIF  486
                NIFKLVKENYEKTENKALKENDVFSFLKGKF*KLN*PNTTMRTNPLKRRLGRVKT*DAEAQRKLNTNLNRL*ES**LLNTKHQKEKRKILLF*RKVN+YKTRNPNKRKE F
Subject    203  NIFKLVKENYEKTENKALKENDVFSFLKGKF*KLN*PNTTMRTNPLKRRLGRVKT*DAEAQRKLNTNLNRL*ES**LLNTKHQKEKRKILLF*RKVNNYKTRNPNKRKEKF  535

Range 2: 579 to 686 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.5 bits(165) 0.0 36/36(100%) 0/36(0%) Plus/Minus
Query        3  RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*VLLR  110
                RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*VLLR
Subject    579  RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*VLLR  686

Range 3: 514 to 591 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.2 bits(112) 0.0 25/26(96%) 0/26(0%) Plus/Minus
Query       98  GVT*ENRKSEH*D*RKLKEIFLNL*R  175
                GVT*ENRKS+H*D*RKLKEIFLNL*R
Subject    514  GVT*ENRKSKH*D*RKLKEIFLNL*R  591

Range 4: 160 to 219 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
33.1 bits(66) 0.0 13/20(65%) 0/20(0%) Plus/Minus
Query      472  RKEIFFVIFKENYNRNY*QQ  531
                R++  FVI KENYN+NY*+Q
Subject    160  REKKNFVILKENYNKNY*RQ  219

Range 5: 108 to 146 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.4 bits(49) 0.0 10/13(77%) 0/13(0%) Plus/Minus
Query      545  IYFCFCLGKTKT*  583
                I FCF LGK KT*
Subject    108  ILFCFSLGKVKT*  146

Range 6: 202 to 534 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
261.8 bits(565) 0.0 109/111(98%) 0/111(0%) Minus/Plus
Query      155  KRFLFSYWGFVFCSH*LSFKITKFFSSLFGVSCLVVINFPRVCLGSCLVFSALPRLKF*LFLSVF*EGWFSSSCWVNLVFKISLLKKKKRHFLLVLCFPFFRSFPSQV*KY  487
                K FLFSYWGFVFCS+*LSFKITKFFSSLFGVSCLVVINFPRVCLGSCLVFSALPRLKF*LFLSVF*EGWFSSSCWVNLVFKISLLKKKKRHFLLVLCFPFFRSFPSQV*KY
Subject    202  KIFLFSYWGFVFCSY*LSFKITKFFSSLFGVSCLVVINFPRVCLGSCLVFSALPRLKF*LFLSVF*EGWFSSSCWVNLVFKISLLKKKKRHFLLVLCFPFFRSFPSQV*KY  534

Range 7: 644 to 688 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.0 bits(70) 0.0 15/15(100%) 0/15(0%) Minus/Plus
Query        1  PAV*GKFALLLPSSF  45
                PAV*GKFALLLPSSF
Subject    644  PAV*GKFALLLPSSF  688

Range 8: 579 to 620 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
32.2 bits(64) 0.0 14/14(100%) 0/14(0%) Minus/Plus
Query       69  PK*HLGIST*DSTS  110
                PK*HLGIST*DSTS
Subject    579  PK*HLGIST*DSTS  620

Range 9: 195 to 533 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
217.3 bits(468) 0.0 108/113(96%) 0/113(0%) Plus/Minus
Query      156  YF*TCEGKLRKNGKQSTXXXXXXXXXXXEILKTKLTQHDDENQPS*KTLRKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKES**LQNTKPQ*EKRNLFCY  494
                YF*TCEGKLRKNGKQSTKRK*RFFFFKREILKTKLTQHDDENQPS*KTLRKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKES**LQNTKPQ*EKR +  +
Subject    195  YF*TCEGKLRKNGKQSTKRK*RFFFFKREILKTKLTQHDDENQPS*KTLRKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKES**LQNTKPQ*EKRKILLF  533

Range 10: 643 to 687 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.0 bits(81) 0.0 15/15(100%) 0/15(0%) Plus/Minus
Query        2  KDDGRRRANFPQTAG  46
                KDDGRRRANFPQTAG
Subject    643  KDDGRRRANFPQTAG  687

Range 11: 578 to 598 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
22.1 bits(42) 0.0 7/7(100%) 0/7(0%) Plus/Minus
Query       91  IPRCYLG  111
                IPRCYLG
Subject    578  IPRCYLG  598

Range 12: 377 to 469 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
69.8 bits(146) 0.0 31/31(100%) 0/31(0%) Minus/Plus
Query      220  NSS*ASFKRVGSHRRVGLI*FLKFPF*KRKN  312
                NSS*ASFKRVGSHRRVGLI*FLKFPF*KRKN
Subject    377  NSS*ASFKRVGSHRRVGLI*FLKFPF*KRKN  469

Range 13: 201 to 293 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
64.3 bits(134) 0.0 27/31(87%) 0/31(0%) Minus/Plus
Query      396  KKISFLLLGFRVL*SLTFL*NNKIFLFSFWC  488
                +  SFLLLGFRVL* LTFL*NNKIFLFSFWC
Subject    201  QNFSFLLLGFRVL*LLTFL*NNKIFLFSFWC  293

Range 14: 586 to 687 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
43.7 bits(89) 0.0 34/34(100%) 0/34(0%) Minus/Plus
Query        2  NT*EFLPKIQXXXXXXXXXXXXLREVCPSSSVVL  103
                NT*EFLPKIQLLSFSSFKFSCCLREVCPSSSVVL
Subject    586  NT*EFLPKIQLLSFSSFKFSCCLREVCPSSSVVL  687

Range 15: 354 to 389 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.1 bits(55) 0.0 12/12(100%) 0/12(0%) Minus/Plus
Query      300  CASAS*VLTLPK  335
                CASAS*VLTLPK
Subject    354  CASAS*VLTLPK  389

Range 16: 196 to 327 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
102.8 bits(218) 0.0 40/44(91%) 0/44(0%) Plus/Minus
Query      362  DSRKVNNY*TRNTKKRREKFCYFKGKLMTTKHETPIREKKSFLL  493
                DSRKVNNY*TRNTKKRREKFCYFKGKL+TTKHETPIREKK+F++
Subject    196  DSRKVNNY*TRNTKKRREKFCYFKGKLITTKHETPIREKKNFVI  327

Range 17: 644 to 688 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.2 bits(77) 0.0 15/15(100%) 0/15(0%) Plus/Minus
Query        1  EGRRKKKGKLPSNSR  45
                EGRRKKKGKLPSNSR
Subject    644  EGRRKKKGKLPSNSR  688

Range 18: 403 to 432 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.8 bits(50) 0.0 10/10(100%) 0/10(0%) Plus/Minus
Query      257  INPTRR*EPT  286
                INPTRR*EPT
Subject    403  INPTRR*EPT  432

Range 19: 203 to 271 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.9 bits(107) 0.0 22/23(96%) 0/23(0%) Minus/Plus
Query      418  KDFFSLIGVSCFVVINFPLK*QN  486
                K FFSLIGVSCFVVINFPLK*QN
Subject    203  KFFFSLIGVSCFVVINFPLK*QN  271

Range 20: 432 to 470 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
33.6 bits(67) 0.0 13/13(100%) 0/13(0%) Minus/Plus
Query      219  FSF*NFPFKKEKT  257
                FSF*NFPFKKEKT
Subject    432  FSF*NFPFKKEKT  470

Range 21: 654 to 686 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.9 bits(61) 0.0 11/11(100%) 0/11(0%) Minus/Plus
Query        3  EGSLPFFFRRP  35
                EGSLPFFFRRP
Subject    654  EGSLPFFFRRP  686

Range 22: 134 to 256 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.5 bits(117) 0.0 25/41(61%) 0/41(0%) Plus/Minus
Query      368  RKVNNY*TRNTKKRREKFCYFKGKLMTTKHETPIREKKSFL  490
                RKVNNY TRN  KR+EKFCYFKGKL      T  R+K  F+
Subject    134  RKVNNYKTRNPNKRKEKFCYFKGKLQ*KLLTTAERKKFYFV  256

Range 23: 184 to 384 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.8 bits(111) 0.0 30/67(45%) 0/67(0%) Plus/Minus
Query      240  EILKTKLTQHDDENQPS*KTLRKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKES  440
                E LK K  +  +    +*   RK  N    + +K + +     GKLITTKHETP RE+KNFVILKE+
Subject    184  EELKLKTRKRREN*TRT*TDSRKVNNY*TRNTKKRREKFCYFKGKLITTKHETPIREKKNFVILKEN  384

Range 24: 182 to 256 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.6 bits(102) 0.0 21/25(84%) 0/25(0%) Minus/Plus
Query      368  *LSFKITKFFSSLFGVSCLVVINFP  442
                * SFKITKFF SL GVSC VVINFP
Subject    182  *FSFKITKFFFSLIGVSCFVVINFP  256

Range 25: 147 to 206 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
22.1 bits(42) 0.0 11/20(55%) 0/20(0%) Minus/Plus
Query      418  FSLIGVSCFVVINFPLK*QN  477
                F L  V      NFPLK*QN
Subject    147  FFLSAVVSSFYCNFPLK*QN  206

Range 26: 138 to 332 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.9 bits(107) 0.0 31/65(48%) 0/65(0%) Plus/Minus
Query      292  KRRLGRVKT*DAEAQRKLNTNLNRL*ES**LLNTKHQKEKRKILLF*RKVNDYKTRNPNKRKEIF  486
                K+ LG++ T   E  ++   N   L ES**L NTK Q EKRKILLF*RK+    T +  K K +F
Subject    138  KQTLGKLITTKHETPKREEKNFVILKES**LQNTKPQ*EKRKILLF*RKITIKTTNDS*KEKILF  332

Range 27: 261 to 320 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
39.1 bits(79) 0.0 14/20(70%) 0/20(0%) Plus/Minus
Query      434  GKLMTTKHETPIREKKSFLL  493
                GKL+TTKHETP RE+K+F++
Subject    261  GKLITTKHETPKREEKNFVI  320

Range 28: 167 to 220 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.6 bits(56) 0.0 11/18(61%) 0/18(0%) Plus/Minus
Query      471  EKRNLFCYF*GKLQQKLL  524
                +++  FCYF GKLQ KLL
Subject    167  KRKEKFCYFKGKLQ*KLL  220

Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome

Sequence ID: KX756669.1 Length: 18313 Number of Matches: 23

Range 1: 18 to 350 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
240.7 bits(519) 0.0 108/111(97%) 0/111(0%) Plus/Minus
Query      154  NIFKLVKENYEKTENKALKENDVFSFLKGKF*KLN*PNTTMRTNPLKRRLGRVKT*DAEAQRKLNTNLNRL*ES**LLNTKHQKEKRKILLF*RKVNDYKTRNPNKRKEIF  486
                NIFKLVKENYEKTENKALKENDVFSFLKGKF*KLN*PNTTMRTNPLKRRLGRVKT*DAEAQRKLNTNLNRL*ES**LLNTKHQKEKRKILLF*RKVNDYKTRN  KRKE F
Subject     18  NIFKLVKENYEKTENKALKENDVFSFLKGKF*KLN*PNTTMRTNPLKRRLGRVKT*DAEAQRKLNTNLNRL*ES**LLNTKHQKEKRKILLF*RKVNDYKTRNTKKRKEKF  350

Range 2: 394 to 501 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.5 bits(165) 0.0 36/36(100%) 0/36(0%) Plus/Minus
Query        3  RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*VLLR  110
                RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*VLLR
Subject    394  RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*VLLR  501

Range 3: 329 to 406 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.2 bits(112) 0.0 25/26(96%) 0/26(0%) Plus/Minus
Query       98  GVT*ENRKSEH*D*RKLKEIFLNL*R  175
                GVT*ENRKS+H*D*RKLKEIFLNL*R
Subject    329  GVT*ENRKSKH*D*RKLKEIFLNL*R  406

Range 4: 17 to 349 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
258.6 bits(558) 0.0 108/111(97%) 0/111(0%) Minus/Plus
Query      155  KRFLFSYWGFVFCSH*LSFKITKFFSSLFGVSCLVVINFPRVCLGSCLVFSALPRLKF*LFLSVF*EGWFSSSCWVNLVFKISLLKKKKRHFLLVLCFPFFRSFPSQV*KY  487
                K FLFS+W FVFCSH*LSFKITKFFSSLFGVSCLVVINFPRVCLGSCLVFSALPRLKF*LFLSVF*EGWFSSSCWVNLVFKISLLKKKKRHFLLVLCFPFFRSFPSQV*KY
Subject     17  KIFLFSFWCFVFCSH*LSFKITKFFSSLFGVSCLVVINFPRVCLGSCLVFSALPRLKF*LFLSVF*EGWFSSSCWVNLVFKISLLKKKKRHFLLVLCFPFFRSFPSQV*KY  349

Range 5: 459 to 503 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.0 bits(70) 0.0 15/15(100%) 0/15(0%) Minus/Plus
Query        1  PAV*GKFALLLPSSF  45
                PAV*GKFALLLPSSF
Subject    459  PAV*GKFALLLPSSF  503

Range 6: 394 to 435 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
32.2 bits(64) 0.0 14/14(100%) 0/14(0%) Minus/Plus
Query       69  PK*HLGIST*DSTS  110
                PK*HLGIST*DSTS
Subject    394  PK*HLGIST*DSTS  435

Range 7: 10 to 348 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
210.9 bits(454) 0.0 106/113(94%) 0/113(0%) Plus/Minus
Query      156  YF*TCEGKLRKNGKQSTXXXXXXXXXXXEILKTKLTQHDDENQPS*KTLRKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKES**LQNTKPQ*EKRNLFCY  494
                YF*TCEGKLRKNGKQSTKRK*RFFFFKREILKTKLTQHDDENQPS*KTLRKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKES**LQNTK Q EKR +  +
Subject     10  YF*TCEGKLRKNGKQSTKRK*RFFFFKREILKTKLTQHDDENQPS*KTLRKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKES**LQNTKHQKEKRKILLF  348

Range 8: 458 to 502 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.0 bits(81) 0.0 15/15(100%) 0/15(0%) Plus/Minus
Query        2  KDDGRRRANFPQTAG  46
                KDDGRRRANFPQTAG
Subject    458  KDDGRRRANFPQTAG  502

Range 9: 393 to 413 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
22.1 bits(42) 0.0 7/7(100%) 0/7(0%) Plus/Minus
Query       91  IPRCYLG  111
                IPRCYLG
Subject    393  IPRCYLG  413

Range 10: 192 to 284 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
69.8 bits(146) 0.0 31/31(100%) 0/31(0%) Minus/Plus
Query      220  NSS*ASFKRVGSHRRVGLI*FLKFPF*KRKN  312
                NSS*ASFKRVGSHRRVGLI*FLKFPF*KRKN
Subject    192  NSS*ASFKRVGSHRRVGLI*FLKFPF*KRKN  284

Range 11: 16 to 108 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.1 bits(127) 0.0 26/31(84%) 0/31(0%) Minus/Plus
Query      396  KKISFLLLGFRVL*SLTFL*NNKIFLFSFWC  488
                +  SFL L FRVL*SLTFL*NNKIFLFSFWC
Subject     16  QNFSFLFLVFRVL*SLTFL*NNKIFLFSFWC  108

Range 12: 401 to 502 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
43.7 bits(89) 0.0 34/34(100%) 0/34(0%) Minus/Plus
Query        2  NT*EFLPKIQXXXXXXXXXXXXLREVCPSSSVVL  103
                NT*EFLPKIQLLSFSSFKFSCCLREVCPSSSVVL
Subject    401  NT*EFLPKIQLLSFSSFKFSCCLREVCPSSSVVL  502

Range 13: 169 to 204 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.1 bits(55) 0.0 12/12(100%) 0/12(0%) Minus/Plus
Query      300  CASAS*VLTLPK  335
                CASAS*VLTLPK
Subject    169  CASAS*VLTLPK  204

Range 14: 11 to 142 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.4 bits(215) 0.0 40/44(91%) 0/44(0%) Plus/Minus
Query      362  DSRKVNNY*TRNTKKRREKFCYFKGKLMTTKHETPIREKKSFLL  493
                DSRKVNNY*TRNTKKRREKFCYFKGKLMTTKHETP REKK+F++
Subject     11  DSRKVNNY*TRNTKKRREKFCYFKGKLMTTKHETPKREKKNFVI  142

Range 15: 459 to 503 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.2 bits(77) 0.0 15/15(100%) 0/15(0%) Plus/Minus
Query        1  EGRRKKKGKLPSNSR  45
                EGRRKKKGKLPSNSR
Subject    459  EGRRKKKGKLPSNSR  503

Range 16: 218 to 247 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.8 bits(50) 0.0 10/10(100%) 0/10(0%) Plus/Minus
Query      257  INPTRR*EPT  286
                INPTRR*EPT
Subject    218  INPTRR*EPT  247

Range 17: 3 to 71 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.9 bits(107) 0.0 21/23(91%) 0/23(0%) Minus/Plus
Query      368  SFKITKFFSSLFGVSCLVVINFP  436
                SFKITKFF SLFGVSC VVINFP
Subject      3  SFKITKFFFSLFGVSCFVVINFP  71

Range 18: 247 to 285 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
33.6 bits(67) 0.0 13/13(100%) 0/13(0%) Minus/Plus
Query      219  FSF*NFPFKKEKT  257
                FSF*NFPFKKEKT
Subject    247  FSF*NFPFKKEKT  285

Range 19: 469 to 501 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.9 bits(61) 0.0 11/11(100%) 0/11(0%) Minus/Plus
Query        3  EGSLPFFFRRP  35
                EGSLPFFFRRP
Subject    469  EGSLPFFFRRP  501

Range 20: 2 to 199 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.6 bits(115) 0.0 30/66(45%) 0/66(0%) Plus/Minus
Query      240  EILKTKLTQHDDENQPS*KTLRKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKE  437
                E LK K  +  +    +*   RK  N    + +K + +     GKL+TTKHETPKRE+KNFVILKE
Subject      2  EELKLKTRKRREN*TRT*TDSRKVNNY*TRNTKKRREKFCYFKGKLMTTKHETPKREKKNFVILKE  199

Range 21: 1 to 147 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.7 bits(113) 0.0 29/49(59%) 0/49(0%) Plus/Minus
Query      292  KRRLGRVKT*DAEAQRKLNTNLNRL*ES**LLNTKHQKEKRKILLF*RK  438
                K+ LG++ T   E  ++   N   L ES**L NTKHQKEKRKILLF*RK
Subject      1  KQTLGKLITTKHETPKREEKNFVILKES**LQNTKHQKEKRKILLF*RK  147

Range 22: 3 to 71 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.8 bits(111) 0.0 20/23(87%) 0/23(0%) Plus/Minus
Query      368  RKVNNY*TRNTKKRREKFCYFKG  436
                RKVN+Y TRNTKKR+EKFCYFKG
Subject      3  RKVNDYKTRNTKKRKEKFCYFKG  71

Range 23: 18 to 86 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.1 bits(103) 0.0 21/23(91%) 0/23(0%) Minus/Plus
Query      418  KDFFSLIGVSCFVVINFPLK*QN  486
                K FFSL GVSCFVVINFPLK*QN
Subject     18  KFFFSLFGVSCFVVINFPLK*QN  86

Grapevine leafroll associated virus 3 isolate GP18, complete genome

Sequence ID: EU259806.1 Length: 18498 Number of Matches: 16

Range 1: 138 to 467 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
120.2 bits(256) 0.0 59/110(54%) 0/110(0%) Plus/Minus
Query      157  IFKLVKENYEKTENKALKENDVFSFLKGKF*KLN*PNTTMRTNPLKRRLGRVKT*DAEAQRKLNTNLNRL*ES**LLNTKHQKEKRKILLF*RKVNDYKTRNPNKRKEIF  486
                IFK  KENY++TEN+ALKENDV    K K * LN PNT  RTNPLKR LG+ KT + + QRKL+ NLNR  E+*   +  + KEK+  LLF RK     T N  K K  F
Subject    138  IFKFAKENYKETENEALKENDVVYLCKRKI*NLNLPNTIKRTNPLKRHLGKTKTKNTKTQRKLDANLNRRKEN*R*QDATY*KEKKSFLLFLRKTTTETTNNS*KEKIYF  467

Range 2: 579 to 686 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.6 bits(102) 0.0 24/36(67%) 0/36(0%) Plus/Minus
Query        3  RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*VLLR  110
                R T+EEGQTSLKQQEN KLEK+RS* L +  *++ R
Subject    579  RGTKEEGQTSLKQQEN*KLEKKRS*NLDKTP*MVRR  686

Range 3: 108 to 146 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.9 bits(72) 0.0 13/13(100%) 0/13(0%) Plus/Minus
Query      545  IYFCFCLGKTKT*  583
                IYFCFCLGKTKT*
Subject    108  IYFCFCLGKTKT*  146

Range 4: 182 to 469 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
111.0 bits(236) 0.0 55/96(57%) 0/96(0%) Minus/Plus
Query      155  *LSFKITKFFSSLFGVSCLVVINFPRVCLGSCLVFSALPRLKF*LFLSVF*EGWFSSSCWVNLVFKISLLKKKKRHFLLVLCFPFFRSFPSQV*KY  442
                * S KITK  SS F  S LV+ NFP VCLG   VF A     F* FLSVF*EG FS SCWVNL F+ S  K ++R FLLV  FPF  +FP ++*K+
Subject    182  *FSLKITKKISSPFSTSRLVIFNFPCVCLGLRQVFFASSCF*F*FFLSVF*EG*FSLSCWVNLDFRFSFYKDRQRRFLLVPRFPFLCNFPLRI*KF  469

Range 5: 579 to 686 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.4 bits(47) 0.0 24/36(67%) 0/36(0%) Minus/Plus
Query        3  PK*HLGIST*DSTSXXXXXXXXXXFEGSLPFFFRRP  110
                P  HLG   *  TSF F*F IFLLFEGSL FFF  P
Subject    579  PTYHLGSFI*VLTSFLF*FLIFLLFEGSLSFFFSSP  686

Range 6: 184 to 465 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
94.1 bits(199) 0.0 52/94(55%) 0/94(0%) Plus/Minus
Query      159  F*TCEGKLRKNGKQSTXXXXXXXXXXXEILKTKLTQHDDENQPS*KTLRKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKES  440
                F*  +GKL++NGK+ TKRK R     +E LK+K TQHD EN PS*KTLRK+*N +   A+KT  +PKQT GKL  T+ +  K EE  FVI KE+
Subject    184  F*IRKGKLQRNGKRGTKRKRRCLSL*KENLKSKFTQHDKEN*PS*KTLRKN*N*KHEDAKKT*RKPKQTQGKLKMTRRDVLKGEEIFFVIFKEN  465

Range 7: 643 to 687 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.1 bits(55) 0.0 11/15(73%) 0/15(0%) Plus/Minus
Query        2  KDDGRRRANFPQTAG  46
                K + RRR NFPQTAG
Subject    643  KGN*RRRTNFPQTAG  687

Range 8: 109 to 219 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.9 bits(96) 0.0 37/37(100%) 0/37(0%) Minus/Plus
Query      472  YVLVFPKQKQK*IXXXXXXXXXXXXXXLKNNKKDFFS  582
                YVLVFPKQKQK*IFSFQLLLVVSVVVFLKNNKKDFFS
Subject    109  YVLVFPKQKQK*IFSFQLLLVVSVVVFLKNNKKDFFS  219

Range 9: 193 to 516 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.1 bits(92) 0.0 31/108(29%) 0/108(0%) Minus/Plus
Query      173  K*QKRFLFSYWGFVFCSH*LSFKITKFFSSLFGVSCLVVINFPRVCLGSCLVFSALPRLKF*LFLSVF*EGWFSSSCWVNLVFKISLLKKKKRHFLLVLCFPFFRSFP  496
                K  K+  FS+     C  * S ++ +F SS   V   +V+ FP+  L   ++F  L + +F*+FL   *   FS S   ++    S    K     L  C  ++ +FP
Subject    193  KNNKKDFFSF*YVASCHL*FSLRLFRFASSFLCVFVFLVLVFPKCLLRGLVLFIVLGKFRF*IFLLQR*TTSFSFSASFSVSL*FSFANLKIFLLFLFSCSIYYFNFP  516

Range 10: 644 to 676 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.5 bits(45) 0.0 10/11(91%) 0/11(0%) Minus/Plus
Query       13  PAV*GKFALLL  45
                PAV*GKF LLL
Subject    644  PAV*GKFVLLL  676

Range 11: 160 to 234 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.8 bits(98) 0.0 20/25(80%) 0/25(0%) Plus/Minus
Query      457  RNPNKRKEIFFVIFKENYNRNY*QQ  531
                R+  K +EIFFVIFKENYNRNY*QQ
Subject    160  RDVLKGEEIFFVIFKENYNRNY*QQ  234

Range 12: 108 to 215 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.9 bits(83) 0.0 35/36(97%) 0/36(0%) Minus/Plus
Query      476  LRLSFS*TKTKVNXXXXXXXXXXXXXFP*K*QKRFL  583
                LRLSFS*TKTKVNFF SAVVSSFCCSFP*K*QKRFL
Subject    108  LRLSFS*TKTKVNFFLSAVVSSFCCSFP*K*QKRFL  215

Range 13: 318 to 404 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.5 bits(69) 0.0 19/29(66%) 0/29(0%) Minus/Plus
Query      220  S*ASFKRVGSHRRVGLI*FLKFPF*KRKN  306
                S* SFKRV S  RVG I* L FPF K  N
Subject    318  S*VSFKRVSSLYRVG*I*ILDFPFTKIDN  404

Range 14: 644 to 688 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
27.6 bits(54) 0.0 11/15(73%) 0/15(0%) Plus/Minus
Query        1  EGRRKKKGKLPSNSR  45
                +G  KKK KLPSNSR
Subject    644  KGELKKKDKLPSNSR  688

Range 15: 167 to 217 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.4 bits(84) 0.0 16/17(94%) 0/17(0%) Plus/Minus
Query      474  KRNLFCYF*GKLQQKLL  524
                +RNLFCYF*GKLQQKLL
Subject    167  RRNLFCYF*GKLQQKLL  217

Range 16: 195 to 386 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.9 bits(48) 0.0 19/64(30%) 0/64(0%) Plus/Minus
Query      303  RKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKES**LQNTKPQ*EKRNLFCY  494
                RK *NL   +  K  +  K+ LGK  T   +T ++ + N    KE+*  Q+     EK++   +
Subject    195  RKI*NLNLPNTIKRTNPLKRHLGKTKTKNTKTQRKLDANLNRRKEN*R*QDATY*KEKKSFLLF  386

Nucleotide Sequence (114 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
12
24
36
48
60
72
84
96
108
114

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
99.1 526.9 34% 3.112e-20 89% JX559645.1
99.1 541.1 34% 3.112e-20 92% NC_004667.1
99.1 541.1 34% 3.112e-20 92% AF037268.2
99.1 526.9 34% 3.112e-20 89% GQ352631.1
99.1 541.1 34% 3.112e-20 92% GU983863.1

Alignments

Grapevine leafroll associated virus 3 isolate 3138 07, complete genome

Sequence ID: JX559645.1 Length: 18498 Number of Matches: 6

Range 1: 5855 to 5968 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
99.1 bits(210) 0.0 36/38(95%) 0/38(0%) Plus/Minus
Query        1  LPSDRALSPDFGVIVLVTPWLCGCWFGTPGDFSSDTPP  114
                LPSDRAL PDFGVIVLV PWLCGCWFGTPGDFSSDTPP
Subject   5855  LPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPP  5968

Range 2: 5855 to 5968 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.0 bits(190) 0.0 36/38(95%) 0/38(0%) Minus/Plus
Query        1  RRRVG*EITRCSKPATTEPRCYQNNHTKIGGQGSI*GK  114
                RRRVG*E+TRCSKPATTEPRCYQNNHTKI GQGSI*GK
Subject   5855  RRRVG*EVTRCSKPATTEPRCYQNNHTKIRGQGSI*GK  5968

Range 3: 5857 to 5967 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
86.8 bits(183) 0.0 34/37(92%) 0/37(0%) Minus/Plus
Query        2  AACRMRNHQVFQTSNHRAKVLPEQSHQNRGTRLYLRE  112
                AACRMR+HQVFQTSNHRAKVLPEQSHQN+G RLYLRE
Subject   5857  AACRMRSHQVFQTSNHRAKVLPEQSHQNQGARLYLRE  5967

Range 4: 5857 to 5967 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
85.4 bits(180) 0.0 35/37(95%) 0/37(0%) Plus/Minus
Query        2  FPQIEPCPPILV*LFW*HLGSVVAGLEHLVISHPTRR  112
                FPQIEPCP ILV*LFW*HLGSVVAGLEHLV SHPTRR
Subject   5857  FPQIEPCPLILV*LFW*HLGSVVAGLEHLVTSHPTRR  5967

Range 5: 5856 to 5966 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
85.4 bits(180) 0.0 33/37(89%) 0/37(0%) Plus/Minus
Query        3  SLR*SLVPRFWCDCSGNTLALWLLVWNTW*FLIRHAA  113
                SLR*SL P FWCDCSG+TLALWLLVWNTW* LIRHAA
Subject   5856  SLR*SLAP*FWCDCSGSTLALWLLVWNTW*LLIRHAA  5966

Range 6: 5856 to 5966 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.3 bits(180) 0.0 35/37(95%) 0/37(0%) Minus/Plus
Query        3  GGVSDEKSPGVPNQQPQSQGVTRTITPKSGDKALSEG  113
                GGVSDEKSPGVPNQQPQSQG TRTITPKSG KALSEG
Subject   5856  GGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEG  5966

Grapevine leafroll associated virus 3, complete genome

Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 6

Range 1: 5276 to 5389 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
99.1 bits(210) 0.0 36/38(95%) 0/38(0%) Plus/Minus
Query        1  LPSDRALSPDFGVIVLVTPWLCGCWFGTPGDFSSDTPP  114
                LPSDRAL PDFGVIVLV PWLCGCWFGTPGDFSSDTPP
Subject   5276  LPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPP  5389

Range 2: 5276 to 5389 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
93.6 bits(198) 0.0 37/38(97%) 0/38(0%) Minus/Plus
Query        1  RRRVG*EITRCSKPATTEPRCYQNNHTKIGGQGSI*GK  114
                RRRVG*E+TRCSKPATTEPRCYQNNHTKIGGQGSI*GK
Subject   5276  RRRVG*EVTRCSKPATTEPRCYQNNHTKIGGQGSI*GK  5389

Range 3: 5278 to 5388 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.0 bits(190) 0.0 36/37(97%) 0/37(0%) Plus/Minus
Query        2  FPQIEPCPPILV*LFW*HLGSVVAGLEHLVISHPTRR  112
                FPQIEPCPPILV*LFW*HLGSVVAGLEHLV SHPTRR
Subject   5278  FPQIEPCPPILV*LFW*HLGSVVAGLEHLVTSHPTRR  5388

Range 4: 5277 to 5387 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
89.5 bits(189) 0.0 34/37(92%) 0/37(0%) Plus/Minus
Query        3  SLR*SLVPRFWCDCSGNTLALWLLVWNTW*FLIRHAA  113
                SLR*SL PRFWCDCSG+TLALWLLVWNTW* LIRHAA
Subject   5277  SLR*SLAPRFWCDCSGSTLALWLLVWNTW*LLIRHAA  5387

Range 5: 5278 to 5388 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
88.6 bits(187) 0.0 35/37(95%) 0/37(0%) Minus/Plus
Query        2  AACRMRNHQVFQTSNHRAKVLPEQSHQNRGTRLYLRE  112
                AACRMR+HQVFQTSNHRAKVLPEQSHQNRG RLYLRE
Subject   5278  AACRMRSHQVFQTSNHRAKVLPEQSHQNRGARLYLRE  5388

Range 6: 5277 to 5387 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.3 bits(180) 0.0 35/37(95%) 0/37(0%) Minus/Plus
Query        3  GGVSDEKSPGVPNQQPQSQGVTRTITPKSGDKALSEG  113
                GGVSDEKSPGVPNQQPQSQG TRTITPKSG KALSEG
Subject   5277  GGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEG  5387

Grapevine leafroll associated virus 3, complete genome

Sequence ID: AF037268.2 Length: 17919 Number of Matches: 6

Range 1: 5276 to 5389 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
99.1 bits(210) 0.0 36/38(95%) 0/38(0%) Plus/Minus
Query        1  LPSDRALSPDFGVIVLVTPWLCGCWFGTPGDFSSDTPP  114
                LPSDRAL PDFGVIVLV PWLCGCWFGTPGDFSSDTPP
Subject   5276  LPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPP  5389

Range 2: 5276 to 5389 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
93.6 bits(198) 0.0 37/38(97%) 0/38(0%) Minus/Plus
Query        1  RRRVG*EITRCSKPATTEPRCYQNNHTKIGGQGSI*GK  114
                RRRVG*E+TRCSKPATTEPRCYQNNHTKIGGQGSI*GK
Subject   5276  RRRVG*EVTRCSKPATTEPRCYQNNHTKIGGQGSI*GK  5389

Range 3: 5278 to 5388 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.0 bits(190) 0.0 36/37(97%) 0/37(0%) Plus/Minus
Query        2  FPQIEPCPPILV*LFW*HLGSVVAGLEHLVISHPTRR  112
                FPQIEPCPPILV*LFW*HLGSVVAGLEHLV SHPTRR
Subject   5278  FPQIEPCPPILV*LFW*HLGSVVAGLEHLVTSHPTRR  5388

Range 4: 5277 to 5387 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
89.5 bits(189) 0.0 34/37(92%) 0/37(0%) Plus/Minus
Query        3  SLR*SLVPRFWCDCSGNTLALWLLVWNTW*FLIRHAA  113
                SLR*SL PRFWCDCSG+TLALWLLVWNTW* LIRHAA
Subject   5277  SLR*SLAPRFWCDCSGSTLALWLLVWNTW*LLIRHAA  5387

Range 5: 5278 to 5388 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
88.6 bits(187) 0.0 35/37(95%) 0/37(0%) Minus/Plus
Query        2  AACRMRNHQVFQTSNHRAKVLPEQSHQNRGTRLYLRE  112
                AACRMR+HQVFQTSNHRAKVLPEQSHQNRG RLYLRE
Subject   5278  AACRMRSHQVFQTSNHRAKVLPEQSHQNRGARLYLRE  5388

Range 6: 5277 to 5387 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.3 bits(180) 0.0 35/37(95%) 0/37(0%) Minus/Plus
Query        3  GGVSDEKSPGVPNQQPQSQGVTRTITPKSGDKALSEG  113
                GGVSDEKSPGVPNQQPQSQG TRTITPKSG KALSEG
Subject   5277  GGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEG  5387

Grapevine leafroll associated virus 3 isolate 621, complete genome

Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 6

Range 1: 5855 to 5968 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
99.1 bits(210) 0.0 36/38(95%) 0/38(0%) Plus/Minus
Query        1  LPSDRALSPDFGVIVLVTPWLCGCWFGTPGDFSSDTPP  114
                LPSDRAL PDFGVIVLV PWLCGCWFGTPGDFSSDTPP
Subject   5855  LPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPP  5968

Range 2: 5855 to 5968 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.0 bits(190) 0.0 36/38(95%) 0/38(0%) Minus/Plus
Query        1  RRRVG*EITRCSKPATTEPRCYQNNHTKIGGQGSI*GK  114
                RRRVG*E+TRCSKPATTEPRCYQNNHTKI GQGSI*GK
Subject   5855  RRRVG*EVTRCSKPATTEPRCYQNNHTKIRGQGSI*GK  5968

Range 3: 5857 to 5967 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
86.8 bits(183) 0.0 34/37(92%) 0/37(0%) Minus/Plus
Query        2  AACRMRNHQVFQTSNHRAKVLPEQSHQNRGTRLYLRE  112
                AACRMR+HQVFQTSNHRAKVLPEQSHQN+G RLYLRE
Subject   5857  AACRMRSHQVFQTSNHRAKVLPEQSHQNQGARLYLRE  5967

Range 4: 5857 to 5967 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
85.4 bits(180) 0.0 35/37(95%) 0/37(0%) Plus/Minus
Query        2  FPQIEPCPPILV*LFW*HLGSVVAGLEHLVISHPTRR  112
                FPQIEPCP ILV*LFW*HLGSVVAGLEHLV SHPTRR
Subject   5857  FPQIEPCPLILV*LFW*HLGSVVAGLEHLVTSHPTRR  5967

Range 5: 5856 to 5966 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
85.4 bits(180) 0.0 33/37(89%) 0/37(0%) Plus/Minus
Query        3  SLR*SLVPRFWCDCSGNTLALWLLVWNTW*FLIRHAA  113
                SLR*SL P FWCDCSG+TLALWLLVWNTW* LIRHAA
Subject   5856  SLR*SLAP*FWCDCSGSTLALWLLVWNTW*LLIRHAA  5966

Range 6: 5856 to 5966 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.3 bits(180) 0.0 35/37(95%) 0/37(0%) Minus/Plus
Query        3  GGVSDEKSPGVPNQQPQSQGVTRTITPKSGDKALSEG  113
                GGVSDEKSPGVPNQQPQSQG TRTITPKSG KALSEG
Subject   5856  GGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEG  5966

Grapevine leafroll associated virus 3 isolate WA MR, complete genome

Sequence ID: GU983863.1 Length: 18498 Number of Matches: 6

Range 1: 5855 to 5968 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
99.1 bits(210) 0.0 36/38(95%) 0/38(0%) Plus/Minus
Query        1  LPSDRALSPDFGVIVLVTPWLCGCWFGTPGDFSSDTPP  114
                LPSDRAL PDFGVIVLV PWLCGCWFGTPGDFSSDTPP
Subject   5855  LPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPP  5968

Range 2: 5855 to 5968 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
93.6 bits(198) 0.0 37/38(97%) 0/38(0%) Minus/Plus
Query        1  RRRVG*EITRCSKPATTEPRCYQNNHTKIGGQGSI*GK  114
                RRRVG*E+TRCSKPATTEPRCYQNNHTKIGGQGSI*GK
Subject   5855  RRRVG*EVTRCSKPATTEPRCYQNNHTKIGGQGSI*GK  5968

Range 3: 5857 to 5967 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.0 bits(190) 0.0 36/37(97%) 0/37(0%) Plus/Minus
Query        2  FPQIEPCPPILV*LFW*HLGSVVAGLEHLVISHPTRR  112
                FPQIEPCPPILV*LFW*HLGSVVAGLEHLV SHPTRR
Subject   5857  FPQIEPCPPILV*LFW*HLGSVVAGLEHLVTSHPTRR  5967

Range 4: 5856 to 5966 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
89.5 bits(189) 0.0 34/37(92%) 0/37(0%) Plus/Minus
Query        3  SLR*SLVPRFWCDCSGNTLALWLLVWNTW*FLIRHAA  113
                SLR*SL PRFWCDCSG+TLALWLLVWNTW* LIRHAA
Subject   5856  SLR*SLAPRFWCDCSGSTLALWLLVWNTW*LLIRHAA  5966

Range 5: 5857 to 5967 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
88.6 bits(187) 0.0 35/37(95%) 0/37(0%) Minus/Plus
Query        2  AACRMRNHQVFQTSNHRAKVLPEQSHQNRGTRLYLRE  112
                AACRMR+HQVFQTSNHRAKVLPEQSHQNRG RLYLRE
Subject   5857  AACRMRSHQVFQTSNHRAKVLPEQSHQNRGARLYLRE  5967

Range 6: 5856 to 5966 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.3 bits(180) 0.0 35/37(95%) 0/37(0%) Minus/Plus
Query        3  GGVSDEKSPGVPNQQPQSQGVTRTITPKSGDKALSEG  113
                GGVSDEKSPGVPNQQPQSQG TRTITPKSG KALSEG
Subject   5856  GGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEG  5966

Nucleotide Sequence (686 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
69
138
207
276
345
414
483
552
621
686

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
158.2 1878.2 10% 8.395e-107 71% EU259806.1
155.0 1867.2 10% 7.496e-106 71% KX756668.1
157.8 1830.5 10% 2.085e-103 71% KJ174518.1
158.2 1850.2 10% 5.645e-103 71% GQ352632.1
158.2 1212.5 9% 1.119e-58 96% KX701860.1

Alignments

Grapevine leafroll associated virus 3 isolate GP18, complete genome

Sequence ID: EU259806.1 Length: 18498 Number of Matches: 21

Range 1: 702 to 899 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
158.2 bits(339) 0.0 65/66(98%) 0/66(0%) Plus/Minus
Query        2  GTLGCEVR*LHIPCELHGCQESSYIAISLVVPNVLQGIIDMRKGENAQRTNIIHGET*KLERRGNF  199
                GTLGCEVR*LHIPCELHGCQESSYIAISLVVPNVLQGIIDMRKGENAQRTN+IHGET*KLERRGNF
Subject    702  GTLGCEVR*LHIPCELHGCQESSYIAISLVVPNVLQGIIDMRKGENAQRTNVIHGET*KLERRGNF  899

Range 2: 240 to 467 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
150.9 bits(323) 0.0 75/76(99%) 0/76(0%) Plus/Minus
Query      434  IFKFAKENYKETENEALKENDVVYLCKRKI*NLNLPNTIKRTNPLKRHLGXXXXXXXXXQRKLDANLNRRKENSR*  661
                IFKFAKENYKETENEALKENDVVYLCKRKI*NLNLPNTIKRTNPLKRHLGKTKTKNTKTQRKLDANLNRRKEN R*
Subject    240  IFKFAKENYKETENEALKENDVVYLCKRKI*NLNLPNTIKRTNPLKRHLGKTKTKNTKTQRKLDANLNRRKEN*R*  467

Range 3: 514 to 600 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.9 bits(144) 0.0 29/29(100%) 0/29(0%) Plus/Minus
Query      301  NSLDGT*ENRKTLTLNTPREEKPPQKR*R  387
                NSLDGT*ENRKTLTLNTPREEKPPQKR*R
Subject    514  NSLDGT*ENRKTLTLNTPREEKPPQKR*R  600

Range 4: 452 to 520 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.7 bits(113) 0.0 23/23(100%) 0/23(0%) Plus/Minus
Query      381  LKES*NSKCCN*KEIKEKFLNSQ  449
                LKES*NSKCCN*KEIKEKFLNSQ
Subject    452  LKES*NSKCCN*KEIKEKFLNSQ  520

Range 5: 578 to 619 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.3 bits(73) 0.0 14/14(100%) 0/14(0%) Plus/Minus
Query      282  EVKT*IKLPRWYVG  323
                EVKT*IKLPRWYVG
Subject    578  EVKT*IKLPRWYVG  619

Range 6: 702 to 899 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
157.8 bits(338) 0.0 66/66(100%) 0/66(0%) Minus/Plus
Query        2  EISSSFKFSSFAMDYVRPLRVFSFPHVNNTLEYIRYNKANSDVGAFLTAMKFTGNVKLSDFTPKSA  199
                EISSSFKFSSFAMDYVRPLRVFSFPHVNNTLEYIRYNKANSDVGAFLTAMKFTGNVKLSDFTPKSA
Subject    702  EISSSFKFSSFAMDYVRPLRVFSFPHVNNTLEYIRYNKANSDVGAFLTAMKFTGNVKLSDFTPKSA  899

Range 7: 454 to 600 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
125.7 bits(268) 0.0 49/49(100%) 0/49(0%) Minus/Plus
Query      301  ANLKIFLLFLFSCSIYYFNFPLAFLWWFFFSWCV*RECFSIFLRTI*GV  447
                ANLKIFLLFLFSCSIYYFNFPLAFLWWFFFSWCV*RECFSIFLRTI*GV
Subject    454  ANLKIFLLFLFSCSIYYFNFPLAFLWWFFFSWCV*RECFSIFLRTI*GV  600

Range 8: 334 to 405 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.8 bits(109) 0.0 24/24(100%) 0/24(0%) Minus/Plus
Query      496  RGLVLFIVLGKFRF*IFLLQR*TT  567
                RGLVLFIVLGKFRF*IFLLQR*TT
Subject    334  RGLVLFIVLGKFRF*IFLLQR*TT  405

Range 9: 236 to 283 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.5 bits(82) 0.0 15/16(94%) 0/16(0%) Minus/Plus
Query      618  LVIWNFPCVCLGLRQV  665
                LVI+NFPCVCLGLRQV
Subject    236  LVIFNFPCVCLGLRQV  283

Range 10: 581 to 661 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.1 bits(44) 0.0 27/27(100%) 0/27(0%) Minus/Plus
Query      240  YVPSREXXXXXXXXXXXXXXFPAV*GK  320
                YVPSREFYLSFNFFSFLVFNFPAV*GK
Subject    581  YVPSREFYLSFNFFSFLVFNFPAV*GK  661

Range 11: 701 to 898 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
147.2 bits(315) 0.0 66/66(100%) 0/66(0%) Plus/Minus
Query        3  ALLGVKSDNFTFPVNFMAVRKAPTSLLALLYLMYSKVLLT*GKEKTRNGRT*SMAKLENLKEEEIS  200
                ALLGVKSDNFTFPVNFMAVRKAPTSLLALLYLMYSKVLLT*GKEKTRNGRT*SMAKLENLKEEEIS
Subject    701  ALLGVKSDNFTFPVNFMAVRKAPTSLLALLYLMYSKVLLT*GKEKTRNGRT*SMAKLENLKEEEIS  898

Range 12: 235 to 402 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
119.3 bits(254) 0.0 52/56(93%) 0/56(0%) Plus/Minus
Query      499  CLSL*KENLKSKFTQHDKEN*PS*KTLRKN*N*KHEDAKKT*RKPKQTQGKFQITK  666
                CLSL*KENLKSKFTQHDKEN*PS*KTLRKN*N*KHEDAKKT*RKPKQTQGK ++T+
Subject    235  CLSL*KENLKSKFTQHDKEN*PS*KTLRKN*N*KHEDAKKT*RKPKQTQGKLKMTR  402

Range 13: 519 to 620 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.8 bits(170) 0.0 34/34(100%) 0/34(0%) Plus/Minus
Query      281  RS*NLDKTP*MVRRKIEKHSR*THQEKKNHHKNA  382
                RS*NLDKTP*MVRRKIEKHSR*THQEKKNHHKNA
Subject    519  RS*NLDKTP*MVRRKIEKHSR*THQEKKNHHKNA  620

Range 14: 332 to 529 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
139.4 bits(298) 0.0 65/66(98%) 0/66(0%) Minus/Plus
Query      372  *EG*FSLSCWVNLDFRFSFYRDRQRRFLLVPRFPFLCNFPLRI*KXXXXXFLVAAFTILTFL*RFC  569
                *EG*FSLSCWVNLDFRFSFY+DRQRRFLLVPRFPFLCNFPLRI*KFFFYFFLVAAFTILTFL*RFC
Subject    332  *EG*FSLSCWVNLDFRFSFYKDRQRRFLLVPRFPFLCNFPLRI*KFFFYFFLVAAFTILTFL*RFC  529

Range 15: 727 to 900 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
132.6 bits(283) 0.0 57/58(98%) 0/58(0%) Minus/Plus
Query        1  QVSPWIMFVRCAFSPFLMSIIPWSTLGTTRLIAM*ELS*QP*SSQGM*SYLTSHPRVP  174
                QVSPWI FVRCAFSPFLMSIIPWSTLGTTRLIAM*ELS*QP*SSQGM*SYLTSHPRVP
Subject    727  QVSPWITFVRCAFSPFLMSIIPWSTLGTTRLIAM*ELS*QP*SSQGM*SYLTSHPRVP  900

Range 16: 579 to 611 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.6 bits(56) 0.0 11/11(100%) 0/11(0%) Minus/Plus
Query      290  PTYHLGSFI*V  322
                PTYHLGSFI*V
Subject    579  PTYHLGSFI*V  611

Range 17: 249 to 278 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.1 bits(44) 0.0 10/10(100%) 0/10(0%) Minus/Plus
Query      623  IFLASV*VCV  652
                IFLASV*VCV
Subject    249  IFLASV*VCV  278

Range 18: 728 to 898 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
131.7 bits(281) 0.0 56/57(98%) 0/57(0%) Minus/Plus
Query        3  KFRHGLCSSVARFLLSSCQ*YLGVH*VQQG**RCRSFPDSHEVHRECEVI*LHTQEC  173
                KFRHGL SSVARFLLSSCQ*YLGVH*VQQG**RCRSFPDSHEVHRECEVI*LHTQEC
Subject    728  KFRHGLRSSVARFLLSSCQ*YLGVH*VQQG**RCRSFPDSHEVHRECEVI*LHTQEC  898

Range 19: 351 to 404 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.9 bits(83) 0.0 17/18(94%) 0/18(0%) Minus/Plus
Query      497  YRVG*I*ILDFPFTEIDN  550
                YRVG*I*ILDFPFT+IDN
Subject    351  YRVG*I*ILDFPFTKIDN  404

Range 20: 736 to 900 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
137.6 bits(294) 0.0 54/55(98%) 0/55(0%) Plus/Minus
Query        1  RHSWV*SQITSHSL*TSWLSGKLLHRY*PCCT*CTPRYY*HEERRKRATDEHNPW  165
                RHSWV*SQITSHSL*TSWLSGKLLHRY*PCCT*CTPRYY*HEERRKRATDE NPW
Subject    736  RHSWV*SQITSHSL*TSWLSGKLLHRY*PCCT*CTPRYY*HEERRKRATDERNPW  900

Range 21: 224 to 274 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.1 bits(55) 0.0 12/17(71%) 0/17(0%) Plus/Minus
Query      627  QT*TDARKIPDNQTHPT  677
                QT*TDARKI D++T  T
Subject    224  QT*TDARKIKDDKTRRT  274

Grapevine leafroll associated virus 3 isolate TC BR, complete genome

Sequence ID: KX756668.1 Length: 18498 Number of Matches: 21

Range 1: 702 to 899 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
155.0 bits(332) 0.0 64/66(97%) 0/66(0%) Plus/Minus
Query        2  GTLGCEVR*LHIPCELHGCQESSYIAISLVVPNVLQGIIDMRKGENAQRTNIIHGET*KLERRGNF  199
                GTLGCEVR*LHIPCELHGCQESSYIAISLVVPNVLQGIIDMRKGENAQRTN+IHG T*KLERRGNF
Subject    702  GTLGCEVR*LHIPCELHGCQESSYIAISLVVPNVLQGIIDMRKGENAQRTNVIHGGT*KLERRGNF  899

Range 2: 240 to 467 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
150.9 bits(323) 0.0 75/76(99%) 0/76(0%) Plus/Minus
Query      434  IFKFAKENYKETENEALKENDVVYLCKRKI*NLNLPNTIKRTNPLKRHLGXXXXXXXXXQRKLDANLNRRKENSR*  661
                IFKFAKENYKETENEALKENDVVYLCKRKI*NLNLPNTIKRTNPLKRHLGKTKTKNTKTQRKLDANLNRRKEN R*
Subject    240  IFKFAKENYKETENEALKENDVVYLCKRKI*NLNLPNTIKRTNPLKRHLGKTKTKNTKTQRKLDANLNRRKEN*R*  467

Range 3: 514 to 600 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.9 bits(144) 0.0 29/29(100%) 0/29(0%) Plus/Minus
Query      301  NSLDGT*ENRKTLTLNTPREEKPPQKR*R  387
                NSLDGT*ENRKTLTLNTPREEKPPQKR*R
Subject    514  NSLDGT*ENRKTLTLNTPREEKPPQKR*R  600

Range 4: 452 to 520 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.7 bits(113) 0.0 23/23(100%) 0/23(0%) Plus/Minus
Query      381  LKES*NSKCCN*KEIKEKFLNSQ  449
                LKES*NSKCCN*KEIKEKFLNSQ
Subject    452  LKES*NSKCCN*KEIKEKFLNSQ  520

Range 5: 578 to 619 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.3 bits(73) 0.0 14/14(100%) 0/14(0%) Plus/Minus
Query      282  EVKT*IKLPRWYVG  323
                EVKT*IKLPRWYVG
Subject    578  EVKT*IKLPRWYVG  619

Range 6: 702 to 899 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
154.1 bits(330) 0.0 65/66(98%) 0/66(0%) Minus/Plus
Query        2  EISSSFKFSSFAMDYVRPLRVFSFPHVNNTLEYIRYNKANSDVGAFLTAMKFTGNVKLSDFTPKSA  199
                EISSSFKFSS AMDYVRPLRVFSFPHVNNTLEYIRYNKANSDVGAFLTAMKFTGNVKLSDFTPKSA
Subject    702  EISSSFKFSSSAMDYVRPLRVFSFPHVNNTLEYIRYNKANSDVGAFLTAMKFTGNVKLSDFTPKSA  899

Range 7: 454 to 600 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
125.7 bits(268) 0.0 49/49(100%) 0/49(0%) Minus/Plus
Query      301  ANLKIFLLFLFSCSIYYFNFPLAFLWWFFFSWCV*RECFSIFLRTI*GV  447
                ANLKIFLLFLFSCSIYYFNFPLAFLWWFFFSWCV*RECFSIFLRTI*GV
Subject    454  ANLKIFLLFLFSCSIYYFNFPLAFLWWFFFSWCV*RECFSIFLRTI*GV  600

Range 8: 334 to 405 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.8 bits(109) 0.0 24/24(100%) 0/24(0%) Minus/Plus
Query      496  RGLVLFIVLGKFRF*IFLLQR*TT  567
                RGLVLFIVLGKFRF*IFLLQR*TT
Subject    334  RGLVLFIVLGKFRF*IFLLQR*TT  405

Range 9: 236 to 283 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.5 bits(82) 0.0 15/16(94%) 0/16(0%) Minus/Plus
Query      618  LVIWNFPCVCLGLRQV  665
                LVI+NFPCVCLGLRQV
Subject    236  LVIFNFPCVCLGLRQV  283

Range 10: 581 to 661 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.1 bits(44) 0.0 27/27(100%) 0/27(0%) Minus/Plus
Query      240  YVPSREXXXXXXXXXXXXXXFPAV*GK  320
                YVPSREFYLSFNFFSFLVFNFPAV*GK
Subject    581  YVPSREFYLSFNFFSFLVFNFPAV*GK  661

Range 11: 701 to 898 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
145.4 bits(311) 0.0 65/66(98%) 0/66(0%) Plus/Minus
Query        3  ALLGVKSDNFTFPVNFMAVRKAPTSLLALLYLMYSKVLLT*GKEKTRNGRT*SMAKLENLKEEEIS  200
                ALLGVKSDNFTFPVNFMAVRKAPTSLLALLYLMYSKVLLT*GKEKTRNGRT*SMA+LENLKEEEIS
Subject    701  ALLGVKSDNFTFPVNFMAVRKAPTSLLALLYLMYSKVLLT*GKEKTRNGRT*SMAELENLKEEEIS  898

Range 12: 235 to 402 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
119.3 bits(254) 0.0 52/56(93%) 0/56(0%) Plus/Minus
Query      499  CLSL*KENLKSKFTQHDKEN*PS*KTLRKN*N*KHEDAKKT*RKPKQTQGKFQITK  666
                CLSL*KENLKSKFTQHDKEN*PS*KTLRKN*N*KHEDAKKT*RKPKQTQGK ++T+
Subject    235  CLSL*KENLKSKFTQHDKEN*PS*KTLRKN*N*KHEDAKKT*RKPKQTQGKLKMTR  402

Range 13: 519 to 620 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.8 bits(170) 0.0 34/34(100%) 0/34(0%) Plus/Minus
Query      281  RS*NLDKTP*MVRRKIEKHSR*THQEKKNHHKNA  382
                RS*NLDKTP*MVRRKIEKHSR*THQEKKNHHKNA
Subject    519  RS*NLDKTP*MVRRKIEKHSR*THQEKKNHHKNA  620

Range 14: 332 to 529 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
139.4 bits(298) 0.0 65/66(98%) 0/66(0%) Minus/Plus
Query      372  *EG*FSLSCWVNLDFRFSFYRDRQRRFLLVPRFPFLCNFPLRI*KXXXXXFLVAAFTILTFL*RFC  569
                *EG*FSLSCWVNLDFRFSFY+DRQRRFLLVPRFPFLCNFPLRI*KFFFYFFLVAAFTILTFL*RFC
Subject    332  *EG*FSLSCWVNLDFRFSFYKDRQRRFLLVPRFPFLCNFPLRI*KFFFYFFLVAAFTILTFL*RFC  529

Range 15: 728 to 898 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
131.7 bits(281) 0.0 56/57(98%) 0/57(0%) Minus/Plus
Query        3  KFRHGLCSSVARFLLSSCQ*YLGVH*VQQG**RCRSFPDSHEVHRECEVI*LHTQEC  173
                KFRHGL SSVARFLLSSCQ*YLGVH*VQQG**RCRSFPDSHEVHRECEVI*LHTQEC
Subject    728  KFRHGLRSSVARFLLSSCQ*YLGVH*VQQG**RCRSFPDSHEVHRECEVI*LHTQEC  898

Range 16: 579 to 611 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.6 bits(56) 0.0 11/11(100%) 0/11(0%) Minus/Plus
Query      290  PTYHLGSFI*V  322
                PTYHLGSFI*V
Subject    579  PTYHLGSFI*V  611

Range 17: 249 to 278 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.1 bits(44) 0.0 10/10(100%) 0/10(0%) Minus/Plus
Query      623  IFLASV*VCV  652
                IFLASV*VCV
Subject    249  IFLASV*VCV  278

Range 18: 727 to 900 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
130.3 bits(278) 0.0 56/58(97%) 0/58(0%) Minus/Plus
Query        1  QVSPWIMFVRCAFSPFLMSIIPWSTLGTTRLIAM*ELS*QP*SSQGM*SYLTSHPRVP  174
                QV PWI FVRCAFSPFLMSIIPWSTLGTTRLIAM*ELS*QP*SSQGM*SYLTSHPRVP
Subject    727  QVPPWITFVRCAFSPFLMSIIPWSTLGTTRLIAM*ELS*QP*SSQGM*SYLTSHPRVP  900

Range 19: 351 to 404 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.9 bits(83) 0.0 17/18(94%) 0/18(0%) Minus/Plus
Query      497  YRVG*I*ILDFPFTEIDN  550
                YRVG*I*ILDFPFT+IDN
Subject    351  YRVG*I*ILDFPFTKIDN  404

Range 20: 736 to 900 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
137.6 bits(294) 0.0 54/55(98%) 0/55(0%) Plus/Minus
Query        1  RHSWV*SQITSHSL*TSWLSGKLLHRY*PCCT*CTPRYY*HEERRKRATDEHNPW  165
                RHSWV*SQITSHSL*TSWLSGKLLHRY*PCCT*CTPRYY*HEERRKRATDE NPW
Subject    736  RHSWV*SQITSHSL*TSWLSGKLLHRY*PCCT*CTPRYY*HEERRKRATDERNPW  900

Range 21: 224 to 274 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.1 bits(55) 0.0 12/17(71%) 0/17(0%) Plus/Minus
Query      627  QT*TDARKIPDNQTHPT  677
                QT*TDARKI D++T  T
Subject    224  QT*TDARKIKDDKTRRT  274

Grapevine leafroll associated virus 3, complete genome

Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 21

Range 1: 702 to 899 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
155.5 bits(333) 0.0 64/66(97%) 0/66(0%) Plus/Minus
Query        2  GTLGCEVR*LHIPCELHGCQESSYIAISLVVPNVLQGIIDMRKGENAQRTNIIHGET*KLERRGNF  199
                GTLGCEVR*LHIPCELH CQESSYIAISLVVPNVLQGIIDMRKGENAQRTN+IHGET*KLERRGNF
Subject    702  GTLGCEVR*LHIPCELHSCQESSYIAISLVVPNVLQGIIDMRKGENAQRTNVIHGET*KLERRGNF  899

Range 2: 240 to 467 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
146.8 bits(314) 0.0 73/76(96%) 0/76(0%) Plus/Minus
Query      434  IFKFAKENYKETENEALKENDVVYLCKRKI*NLNLPNTIKRTNPLKRHLGXXXXXXXXXQRKLDANLNRRKENSR*  661
                IFKFAKENYKETENEALKENDVVYLCKRKI*NLNLPN IKRTNPLKRHLGKTKTKNTKT+RKLDANLNRRKEN R*
Subject    240  IFKFAKENYKETENEALKENDVVYLCKRKI*NLNLPNAIKRTNPLKRHLGKTKTKNTKTRRKLDANLNRRKEN*R*  467

Range 3: 514 to 600 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
66.1 bits(138) 0.0 28/29(97%) 0/29(0%) Plus/Minus
Query      301  NSLDGT*ENRKTLTLNTPREEKPPQKR*R  387
                NSLDGT*ENRKTLTLN PREEKPPQKR*R
Subject    514  NSLDGT*ENRKTLTLNPPREEKPPQKR*R  600

Range 4: 452 to 520 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.7 bits(113) 0.0 23/23(100%) 0/23(0%) Plus/Minus
Query      381  LKES*NSKCCN*KEIKEKFLNSQ  449
                LKES*NSKCCN*KEIKEKFLNSQ
Subject    452  LKES*NSKCCN*KEIKEKFLNSQ  520

Range 5: 578 to 619 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.5 bits(69) 0.0 13/14(93%) 0/14(0%) Plus/Minus
Query      282  EVKT*IKLPRWYVG  323
                EVK+*IKLPRWYVG
Subject    578  EVKS*IKLPRWYVG  619

Range 6: 702 to 899 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
157.8 bits(338) 0.0 66/66(100%) 0/66(0%) Minus/Plus
Query        2  EISSSFKFSSFAMDYVRPLRVFSFPHVNNTLEYIRYNKANSDVGAFLTAMKFTGNVKLSDFTPKSA  199
                EISSSFKFSSFAMDYVRPLRVFSFPHVNNTLEYIRYNKANSDVGAFLTAMKFTGNVKLSDFTPKSA
Subject    702  EISSSFKFSSFAMDYVRPLRVFSFPHVNNTLEYIRYNKANSDVGAFLTAMKFTGNVKLSDFTPKSA  899

Range 7: 454 to 600 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
120.7 bits(257) 0.0 48/49(98%) 0/49(0%) Minus/Plus
Query      301  ANLKIFLLFLFSCSIYYFNFPLAFLWWFFFSWCV*RECFSIFLRTI*GV  447
                ANLKIFLLFLFSCSIYYFNFPLAFLWWFFFSW V*RECFSIFLRTI*GV
Subject    454  ANLKIFLLFLFSCSIYYFNFPLAFLWWFFFSWWV*RECFSIFLRTI*GV  600

Range 8: 334 to 405 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.0 bits(105) 0.0 23/24(96%) 0/24(0%) Minus/Plus
Query      496  RGLVLFIVLGKFRF*IFLLQR*TT  567
                RGLVLFI LGKFRF*IFLLQR*TT
Subject    334  RGLVLFIALGKFRF*IFLLQR*TT  405

Range 9: 236 to 283 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.5 bits(82) 0.0 15/16(94%) 0/16(0%) Minus/Plus
Query      618  LVIWNFPCVCLGLRQV  665
                LVI+NFPCVCLGLRQV
Subject    236  LVIFNFPCVCLGLRQV  283

Range 10: 581 to 661 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.1 bits(44) 0.0 26/27(96%) 0/27(0%) Minus/Plus
Query      240  YVPSREXXXXXXXXXXXXXXFPAV*GK  320
                YVPSREFYL+FNFFSFLVFNFPAV*GK
Subject    581  YVPSREFYLTFNFFSFLVFNFPAV*GK  661

Range 11: 701 to 898 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
145.4 bits(311) 0.0 65/66(98%) 0/66(0%) Plus/Minus
Query        3  ALLGVKSDNFTFPVNFMAVRKAPTSLLALLYLMYSKVLLT*GKEKTRNGRT*SMAKLENLKEEEIS  200
                ALLGVKSDNFTFPVNF+AVRKAPTSLLALLYLMYSKVLLT*GKEKTRNGRT*SMAKLENLKEEEIS
Subject    701  ALLGVKSDNFTFPVNFIAVRKAPTSLLALLYLMYSKVLLT*GKEKTRNGRT*SMAKLENLKEEEIS  898

Range 12: 235 to 402 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
115.6 bits(246) 0.0 51/56(91%) 0/56(0%) Plus/Minus
Query      499  CLSL*KENLKSKFTQHDKEN*PS*KTLRKN*N*KHEDAKKT*RKPKQTQGKFQITK  666
                CLSL*KENLKSKFTQ DKEN*PS*KTLRKN*N*KHEDAKKT*RKPKQTQGK ++T+
Subject    235  CLSL*KENLKSKFTQRDKEN*PS*KTLRKN*N*KHEDAKKT*RKPKQTQGKLKMTR  402

Range 13: 519 to 620 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.0 bits(164) 0.0 33/34(97%) 0/34(0%) Plus/Minus
Query      281  RS*NLDKTP*MVRRKIEKHSR*THQEKKNHHKNA  382
                RS* LDKTP*MVRRKIEKHSR*THQEKKNHHKNA
Subject    519  RS*KLDKTP*MVRRKIEKHSR*THQEKKNHHKNA  620

Range 14: 332 to 529 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
133.9 bits(286) 0.0 64/66(97%) 0/66(0%) Minus/Plus
Query      372  *EG*FSLSCWVNLDFRFSFYRDRQRRFLLVPRFPFLCNFPLRI*KXXXXXFLVAAFTILTFL*RFC  569
                *EG*FSLS WVNLDFRFSFY+DRQRRFLLVPRFPFLCNFPLRI*KFFFYFFLVAAFTILTFL*RFC
Subject    332  *EG*FSLSRWVNLDFRFSFYKDRQRRFLLVPRFPFLCNFPLRI*KFFFYFFLVAAFTILTFL*RFC  529

Range 15: 728 to 898 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.9 bits(275) 0.0 55/57(96%) 0/57(0%) Minus/Plus
Query        3  KFRHGLCSSVARFLLSSCQ*YLGVH*VQQG**RCRSFPDSHEVHRECEVI*LHTQEC  173
                KFRHGL SSVARFLLSSCQ*YLGVH*VQQG**RCRSFPDS+EVHRECEVI*LHTQEC
Subject    728  KFRHGLRSSVARFLLSSCQ*YLGVH*VQQG**RCRSFPDSYEVHRECEVI*LHTQEC  898

Range 16: 579 to 611 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
27.2 bits(53) 0.0 10/11(91%) 0/11(0%) Minus/Plus
Query      290  PTYHLGSFI*V  322
                PTYHLGSFI*+
Subject    579  PTYHLGSFI*L  611

Range 17: 249 to 278 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.1 bits(44) 0.0 10/10(100%) 0/10(0%) Minus/Plus
Query      623  IFLASV*VCV  652
                IFLASV*VCV
Subject    249  IFLASV*VCV  278

Range 18: 727 to 900 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.0 bits(273) 0.0 56/58(97%) 0/58(0%) Minus/Plus
Query        1  QVSPWIMFVRCAFSPFLMSIIPWSTLGTTRLIAM*ELS*QP*SSQGM*SYLTSHPRVP  174
                QVSPWI FVRCAFSPFLMSIIPWSTLGTTRLIAM*ELS*Q *SSQGM*SYLTSHPRVP
Subject    727  QVSPWITFVRCAFSPFLMSIIPWSTLGTTRLIAM*ELS*QL*SSQGM*SYLTSHPRVP  900

Range 19: 351 to 404 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.9 bits(83) 0.0 17/18(94%) 0/18(0%) Minus/Plus
Query      497  YRVG*I*ILDFPFTEIDN  550
                YRVG*I*ILDFPFT+IDN
Subject    351  YRVG*I*ILDFPFTKIDN  404

Range 20: 736 to 900 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
130.7 bits(279) 0.0 53/55(96%) 0/55(0%) Plus/Minus
Query        1  RHSWV*SQITSHSL*TSWLSGKLLHRY*PCCT*CTPRYY*HEERRKRATDEHNPW  165
                RHSWV*SQITSHSL*TS LSGKLLHRY*PCCT*CTPRYY*HEERRKRATDE NPW
Subject    736  RHSWV*SQITSHSL*TS*LSGKLLHRY*PCCT*CTPRYY*HEERRKRATDERNPW  900

Range 21: 224 to 274 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.1 bits(55) 0.0 12/17(71%) 0/17(0%) Plus/Minus
Query      627  QT*TDARKIPDNQTHPT  677
                QT*TDARKI D++T  T
Subject    224  QT*TDARKIKDDKTRRT  274

Grapevine leafroll associated virus 3 isolate 623, complete genome

Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 21

Range 1: 702 to 899 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
158.2 bits(339) 0.0 65/66(98%) 0/66(0%) Plus/Minus
Query        2  GTLGCEVR*LHIPCELHGCQESSYIAISLVVPNVLQGIIDMRKGENAQRTNIIHGET*KLERRGNF  199
                GTLGCEVR*LHIPCELHGCQESSYIAISLVVPNVLQGIIDMRKGENAQRTN+IHGET*KLERRGNF
Subject    702  GTLGCEVR*LHIPCELHGCQESSYIAISLVVPNVLQGIIDMRKGENAQRTNVIHGET*KLERRGNF  899

Range 2: 240 to 467 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
150.9 bits(323) 0.0 75/76(99%) 0/76(0%) Plus/Minus
Query      434  IFKFAKENYKETENEALKENDVVYLCKRKI*NLNLPNTIKRTNPLKRHLGXXXXXXXXXQRKLDANLNRRKENSR*  661
                IFKFAKENYKETENEALKENDVVYLCKRKI*NLNLPNTIKRTNPLKRHLGKTKTKNTKTQRKLDANLNRRKEN R*
Subject    240  IFKFAKENYKETENEALKENDVVYLCKRKI*NLNLPNTIKRTNPLKRHLGKTKTKNTKTQRKLDANLNRRKEN*R*  467

Range 3: 519 to 620 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.8 bits(170) 0.0 34/34(100%) 0/34(0%) Plus/Minus
Query      281  RS*NLDKTP*MVRRKIEKHSR*THQEKKNHHKNA  382
                RS*NLDKTP*MVRRKIEKHSR*THQEKKNHHKNA
Subject    519  RS*NLDKTP*MVRRKIEKHSR*THQEKKNHHKNA  620

Range 4: 452 to 520 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.8 bits(98) 0.0 21/23(91%) 0/23(0%) Plus/Minus
Query      381  LKES*NSKCCN*KEIKEKFLNSQ  449
                LKE+*NSKC N*KEIKEKFLNSQ
Subject    452  LKEN*NSKCRN*KEIKEKFLNSQ  520

Range 5: 702 to 899 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
156.4 bits(335) 0.0 65/66(98%) 0/66(0%) Minus/Plus
Query        2  EISSSFKFSSFAMDYVRPLRVFSFPHVNNTLEYIRYNKANSDVGAFLTAMKFTGNVKLSDFTPKSA  199
                EISSSFKFSSFAMDYVRPLRVFSFPHVNNTLEYIRYNKANSDVGAFLT+MKFTGNVKLSDFTPKSA
Subject    702  EISSSFKFSSFAMDYVRPLRVFSFPHVNNTLEYIRYNKANSDVGAFLTSMKFTGNVKLSDFTPKSA  899

Range 6: 454 to 600 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.9 bits(264) 0.0 48/49(98%) 0/49(0%) Minus/Plus
Query      301  ANLKIFLLFLFSCSIYYFNFPLAFLWWFFFSWCV*RECFSIFLRTI*GV  447
                ANLKIFLLFLFSC IYYFNFPLAFLWWFFFSWCV*RECFSIFLRTI*GV
Subject    454  ANLKIFLLFLFSCGIYYFNFPLAFLWWFFFSWCV*RECFSIFLRTI*GV  600

Range 7: 334 to 405 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.8 bits(109) 0.0 24/24(100%) 0/24(0%) Minus/Plus
Query      496  RGLVLFIVLGKFRF*IFLLQR*TT  567
                RGLVLFIVLGKFRF*IFLLQR*TT
Subject    334  RGLVLFIVLGKFRF*IFLLQR*TT  405

Range 8: 236 to 283 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.5 bits(82) 0.0 15/16(94%) 0/16(0%) Minus/Plus
Query      618  LVIWNFPCVCLGLRQV  665
                LVI+NFPCVCLGLRQV
Subject    236  LVIFNFPCVCLGLRQV  283

Range 9: 581 to 661 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.1 bits(44) 0.0 26/27(96%) 0/27(0%) Minus/Plus
Query      240  YVPSREXXXXXXXXXXXXXXFPAV*GK  320
                YVPSRE YLSFNFFSFLVFNFPAV*GK
Subject    581  YVPSRESYLSFNFFSFLVFNFPAV*GK  661

Range 10: 701 to 898 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.5 bits(309) 0.0 65/66(98%) 0/66(0%) Plus/Minus
Query        3  ALLGVKSDNFTFPVNFMAVRKAPTSLLALLYLMYSKVLLT*GKEKTRNGRT*SMAKLENLKEEEIS  200
                ALLGVKSDNFTFPVNFM VRKAPTSLLALLYLMYSKVLLT*GKEKTRNGRT*SMAKLENLKEEEIS
Subject    701  ALLGVKSDNFTFPVNFMDVRKAPTSLLALLYLMYSKVLLT*GKEKTRNGRT*SMAKLENLKEEEIS  898

Range 11: 235 to 402 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
119.3 bits(254) 0.0 52/56(93%) 0/56(0%) Plus/Minus
Query      499  CLSL*KENLKSKFTQHDKEN*PS*KTLRKN*N*KHEDAKKT*RKPKQTQGKFQITK  666
                CLSL*KENLKSKFTQHDKEN*PS*KTLRKN*N*KHEDAKKT*RKPKQTQGK ++T+
Subject    235  CLSL*KENLKSKFTQHDKEN*PS*KTLRKN*N*KHEDAKKT*RKPKQTQGKLKMTR  402

Range 12: 514 to 600 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
66.6 bits(139) 0.0 28/29(97%) 0/29(0%) Plus/Minus
Query      301  NSLDGT*ENRKTLTLNTPREEKPPQKR*R  387
                +SLDGT*ENRKTLTLNTPREEKPPQKR*R
Subject    514  DSLDGT*ENRKTLTLNTPREEKPPQKR*R  600

Range 13: 578 to 619 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.0 bits(70) 0.0 13/14(93%) 0/14(0%) Plus/Minus
Query      282  EVKT*IKLPRWYVG  323
                EVKT*I+LPRWYVG
Subject    578  EVKT*IRLPRWYVG  619

Range 14: 332 to 529 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
136.7 bits(292) 0.0 64/66(97%) 0/66(0%) Minus/Plus
Query      372  *EG*FSLSCWVNLDFRFSFYRDRQRRFLLVPRFPFLCNFPLRI*KXXXXXFLVAAFTILTFL*RFC  569
                *EG*FSLSCWVNLDFRFSFY+DRQRRFLLVPRFPFLCNFPLRI*KFFFYFFLVAAFTIL FL*RFC
Subject    332  *EG*FSLSCWVNLDFRFSFYKDRQRRFLLVPRFPFLCNFPLRI*KFFFYFFLVAAFTILIFL*RFC  529

Range 15: 727 to 900 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
130.3 bits(278) 0.0 56/58(97%) 0/58(0%) Minus/Plus
Query        1  QVSPWIMFVRCAFSPFLMSIIPWSTLGTTRLIAM*ELS*QP*SSQGM*SYLTSHPRVP  174
                QVSPWI FVRCAFSPFLMSIIPWSTLGTTRLIAM*ELS* P*SSQGM*SYLTSHPRVP
Subject    727  QVSPWITFVRCAFSPFLMSIIPWSTLGTTRLIAM*ELS*HP*SSQGM*SYLTSHPRVP  900

Range 16: 579 to 611 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.8 bits(50) 0.0 10/11(91%) 0/11(0%) Minus/Plus
Query      290  PTYHLGSFI*V  322
                PTYHLGS I*V
Subject    579  PTYHLGSLI*V  611

Range 17: 249 to 278 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.1 bits(44) 0.0 10/10(100%) 0/10(0%) Minus/Plus
Query      623  IFLASV*VCV  652
                IFLASV*VCV
Subject    249  IFLASV*VCV  278

Range 18: 728 to 898 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.9 bits(275) 0.0 55/57(96%) 0/57(0%) Minus/Plus
Query        3  KFRHGLCSSVARFLLSSCQ*YLGVH*VQQG**RCRSFPDSHEVHRECEVI*LHTQEC  173
                KFRHGL SSVARFLLSSCQ*YLGVH*VQQG**RCRSFPD HEVHRECEVI*LHTQEC
Subject    728  KFRHGLRSSVARFLLSSCQ*YLGVH*VQQG**RCRSFPDIHEVHRECEVI*LHTQEC  898

Range 19: 351 to 404 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.9 bits(83) 0.0 17/18(94%) 0/18(0%) Minus/Plus
Query      497  YRVG*I*ILDFPFTEIDN  550
                YRVG*I*ILDFPFT+IDN
Subject    351  YRVG*I*ILDFPFTKIDN  404

Range 20: 736 to 900 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
136.7 bits(292) 0.0 53/55(96%) 0/55(0%) Plus/Minus
Query        1  RHSWV*SQITSHSL*TSWLSGKLLHRY*PCCT*CTPRYY*HEERRKRATDEHNPW  165
                RHSWV*SQITSHSL*TSW+SGKLLHRY*PCCT*CTPRYY*HEERRKRATDE NPW
Subject    736  RHSWV*SQITSHSL*TSWMSGKLLHRY*PCCT*CTPRYY*HEERRKRATDERNPW  900

Range 21: 224 to 274 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.1 bits(55) 0.0 12/17(71%) 0/17(0%) Plus/Minus
Query      627  QT*TDARKIPDNQTHPT  677
                QT*TDARKI D++T  T
Subject    224  QT*TDARKIKDDKTRRT  274

Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome

Sequence ID: KX701860.1 Length: 18020 Number of Matches: 13

Range 1: 220 to 417 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
155.5 bits(333) 0.0 65/66(98%) 0/66(0%) Minus/Plus
Query        2  EISSSFKFSSFAMDYVRPLRVFSFPHVNNTLEYIRYNKANSDVGAFLTAMKFTGNVKLSDFTPKSA  199
                EISSSFKFSSFAMDYVRPLRVFSFPHVNNTLEYIRYNKANSDVGAFLTAMKF GNVKLSDFTPKSA
Subject    220  EISSSFKFSSFAMDYVRPLRVFSFPHVNNTLEYIRYNKANSDVGAFLTAMKFAGNVKLSDFTPKSA  417

Range 2: 17 to 118 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.8 bits(194) 0.0 34/34(100%) 0/34(0%) Minus/Plus
Query      301  YYFNFPLAFLWWFFFSWCV*RECFSIFLRTI*GV  402
                YYFNFPLAFLWWFFFSWCV*RECFSIFLRTI*GV
Subject     17  YYFNFPLAFLWWFFFSWCV*RECFSIFLRTI*GV  118

Range 3: 99 to 179 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.1 bits(44) 0.0 27/27(100%) 0/27(0%) Minus/Plus
Query      240  YVPSREXXXXXXXXXXXXXXFPAV*GK  320
                YVPSREFYLSFNFFSFLVFNFPAV*GK
Subject     99  YVPSREFYLSFNFFSFLVFNFPAV*GK  179

Range 4: 220 to 417 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
158.2 bits(339) 0.0 65/66(98%) 0/66(0%) Plus/Minus
Query        2  GTLGCEVR*LHIPCELHGCQESSYIAISLVVPNVLQGIIDMRKGENAQRTNIIHGET*KLERRGNF  199
                GTLGCEVR*LHIPCELHGCQESSYIAISLVVPNVLQGIIDMRKGENAQRTN+IHGET*KLERRGNF
Subject    220  GTLGCEVR*LHIPCELHGCQESSYIAISLVVPNVLQGIIDMRKGENAQRTNVIHGET*KLERRGNF  417

Range 5: 37 to 138 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.8 bits(170) 0.0 34/34(100%) 0/34(0%) Plus/Minus
Query      281  RS*NLDKTP*MVRRKIEKHSR*THQEKKNHHKNA  382
                RS*NLDKTP*MVRRKIEKHSR*THQEKKNHHKNA
Subject     37  RS*NLDKTP*MVRRKIEKHSR*THQEKKNHHKNA  138

Range 6: 219 to 416 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
145.4 bits(311) 0.0 65/66(98%) 0/66(0%) Plus/Minus
Query        3  ALLGVKSDNFTFPVNFMAVRKAPTSLLALLYLMYSKVLLT*GKEKTRNGRT*SMAKLENLKEEEIS  200
                ALLGVKSDNFTFP NFMAVRKAPTSLLALLYLMYSKVLLT*GKEKTRNGRT*SMAKLENLKEEEIS
Subject    219  ALLGVKSDNFTFPANFMAVRKAPTSLLALLYLMYSKVLLT*GKEKTRNGRT*SMAKLENLKEEEIS  416

Range 7: 32 to 118 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.9 bits(144) 0.0 29/29(100%) 0/29(0%) Plus/Minus
Query      301  NSLDGT*ENRKTLTLNTPREEKPPQKR*R  387
                NSLDGT*ENRKTLTLNTPREEKPPQKR*R
Subject     32  NSLDGT*ENRKTLTLNTPREEKPPQKR*R  118

Range 8: 254 to 418 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
135.3 bits(289) 0.0 53/55(96%) 0/55(0%) Plus/Minus
Query        1  RHSWV*SQITSHSL*TSWLSGKLLHRY*PCCT*CTPRYY*HEERRKRATDEHNPW  165
                RHSWV*SQITSHSL TSWLSGKLLHRY*PCCT*CTPRYY*HEERRKRATDE NPW
Subject    254  RHSWV*SQITSHSLRTSWLSGKLLHRY*PCCT*CTPRYY*HEERRKRATDERNPW  418

Range 9: 96 to 137 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.3 bits(73) 0.0 14/14(100%) 0/14(0%) Plus/Minus
Query      282  EVKT*IKLPRWYVG  323
                EVKT*IKLPRWYVG
Subject     96  EVKT*IKLPRWYVG  137

Range 10: 245 to 418 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
132.6 bits(283) 0.0 57/58(98%) 0/58(0%) Minus/Plus
Query        1  QVSPWIMFVRCAFSPFLMSIIPWSTLGTTRLIAM*ELS*QP*SSQGM*SYLTSHPRVP  174
                QVSPWI FVRCAFSPFLMSIIPWSTLGTTRLIAM*ELS*QP*SSQGM*SYLTSHPRVP
Subject    245  QVSPWITFVRCAFSPFLMSIIPWSTLGTTRLIAM*ELS*QP*SSQGM*SYLTSHPRVP  418

Range 11: 97 to 129 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.6 bits(56) 0.0 11/11(100%) 0/11(0%) Minus/Plus
Query      290  PTYHLGSFI*V  322
                PTYHLGSFI*V
Subject     97  PTYHLGSFI*V  129

Range 12: 15 to 47 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.1 bits(55) 0.0 11/11(100%) 0/11(0%) Minus/Plus
Query      372  FTILTFL*RFC  404
                FTILTFL*RFC
Subject     15  FTILTFL*RFC  47

Range 13: 246 to 416 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.0 bits(273) 0.0 55/57(96%) 0/57(0%) Minus/Plus
Query        3  KFRHGLCSSVARFLLSSCQ*YLGVH*VQQG**RCRSFPDSHEVHRECEVI*LHTQEC  173
                KFRHGL SSVARFLLSSCQ*YLGVH*VQQG**RCRSFPDSHEV RECEVI*LHTQEC
Subject    246  KFRHGLRSSVARFLLSSCQ*YLGVH*VQQG**RCRSFPDSHEVRRECEVI*LHTQEC  416

Nucleotide Sequence (732 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
74
148
222
296
370
444
518
592
666
732

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
571.2 3156.3 28% 5.31e-161 100% JX559645.1
571.2 3133.3 28% 5.31e-161 99% GQ352631.1
571.2 3137.5 28% 5.31e-161 96% GU983863.1
571.2 3148.5 28% 5.31e-161 99% KX756669.1
567.1 2791.2 26% 9.251e-160 82% GQ352632.1

Alignments

Grapevine leafroll associated virus 3 isolate 3138 07, complete genome

Sequence ID: JX559645.1 Length: 18498 Number of Matches: 12

Range 1: 11412 to 12140 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
571.2 bits(1243) 0.0 243/243(100%) 0/243(0%) Minus/Plus
Query        2  AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR  730
                AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR
Subject  11412  AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR  12140

Range 2: 11410 to 12141 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
556.4 bits(1208) 0.0 244/244(100%) 0/244(0%) Plus/Minus
Query        1  LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSXXXXXXXXNI*NRYCRTRP*ISAAN*PHHS*P*LEHLTPQS*QQ*PGLGKSCQDQF*ILPQP*R*MVQRLRPVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH  732
                LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSKP*PHKPPNI*NRYCRTRP*ISAAN*PHHS*P*LEHLTPQS*QQ*PGLGKSCQDQF*ILPQP*R*MVQRLRPVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH
Subject  11410  LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSKP*PHKPPNI*NRYCRTRP*ISAAN*PHHS*P*LEHLTPQS*QQ*PGLGKSCQDQF*ILPQP*R*MVQRLRPVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH  12141

Range 3: 11652 to 12140 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
393.8 bits(853) 0.0 163/163(100%) 0/163(0%) Plus/Minus
Query        2  SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHITPDL  490
                SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHITPDL
Subject  11652  SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHITPDL  12140

Range 4: 11412 to 11612 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
171.5 bits(368) 0.0 67/67(100%) 0/67(0%) Plus/Minus
Query      530  RVWVKVVKTSFEYFHSPSAEWCNDCVQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG  730
                RVWVKVVKTSFEYFHSPSAEWCNDCVQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG
Subject  11412  RVWVKVVKTSFEYFHSPSAEWCNDCVQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG  11612

Range 5: 11656 to 12141 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
378.6 bits(820) 0.0 162/162(100%) 0/162(0%) Minus/Plus
Query        1  SGVMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTLXXXXXXXR*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE  486
                SGVMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTL*RIR*RTR*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE
Subject  11656  SGVMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTL*RIR*RTR*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE  12141

Range 6: 11410 to 11583 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
141.3 bits(302) 0.0 58/58(100%) 0/58(0%) Minus/Plus
Query      559  MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNWTQSLHHSALGLWKYSK  732
                MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNWTQSLHHSALGLWKYSK
Subject  11410  MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNWTQSLHHSALGLWKYSK  11583

Range 7: 11771 to 12139 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
290.7 bits(628) 0.0 123/123(100%) 0/123(0%) Minus/Plus
Query        3  *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE  371
                *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE
Subject  11771  *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE  12139

Range 8: 11540 to 11710 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
143.1 bits(306) 0.0 57/57(100%) 0/57(0%) Minus/Plus
Query      432  NRCTIQR*GCGSIQNWS*QLLPRPGYCCYDWGVKCSS*GQE*CG*FAADI*GRVRQY  602
                NRCTIQR*GCGSIQNWS*QLLPRPGYCCYDWGVKCSS*GQE*CG*FAADI*GRVRQY
Subject  11540  NRCTIQR*GCGSIQNWS*QLLPRPGYCCYDWGVKCSS*GQE*CG*FAADI*GRVRQY  11710

Range 9: 11411 to 11488 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.9 bits(131) 0.0 26/26(100%) 0/26(0%) Minus/Plus
Query      654  CQVRDIRILDEGRLV*Q*RYNATPYP  731
                CQVRDIRILDEGRLV*Q*RYNATPYP
Subject  11411  CQVRDIRILDEGRLV*Q*RYNATPYP  11488

Range 10: 11843 to 12139 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
235.2 bits(507) 0.0 99/99(100%) 0/99(0%) Plus/Minus
Query        3  LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI  299
                LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI
Subject  11843  LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI  12139

Range 11: 11537 to 11776 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
147.7 bits(316) 0.0 80/80(100%) 0/80(0%) Plus/Minus
Query      366  PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKXXXXXXXXXXXXDPPVITAITGSG*KLSRPVLNTSTALALNGATIA  605
                PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA
Subject  11537  PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA  11776

Range 12: 11411 to 11488 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.8 bits(133) 0.0 26/26(100%) 0/26(0%) Plus/Minus
Query      654  GIRCCVIALLLDKSSFIEDTNIPNLA  731
                GIRCCVIALLLDKSSFIEDTNIPNLA
Subject  11411  GIRCCVIALLLDKSSFIEDTNIPNLA  11488

Grapevine leafroll associated virus 3 isolate 621, complete genome

Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 12

Range 1: 11412 to 12140 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
571.2 bits(1243) 0.0 243/243(100%) 0/243(0%) Minus/Plus
Query        2  AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR  730
                AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR
Subject  11412  AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR  12140

Range 2: 11410 to 12141 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
549.5 bits(1193) 0.0 242/244(99%) 0/244(0%) Plus/Minus
Query        1  LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSXXXXXXXXNI*NRYCRTRP*ISAAN*PHHS*P*LEHLTPQS*QQ*PGLGKSCQDQF*ILPQP*R*MVQRLRPVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH  732
                LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRI HLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKY SKP*PHKPPNI*NRYCRTRP*ISAAN*PHHS*P*LEHLTPQS*QQ*PGLGKSCQDQF*ILPQP*R*MVQRLRPVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH
Subject  11410  LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRILHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYHSKP*PHKPPNI*NRYCRTRP*ISAAN*PHHS*P*LEHLTPQS*QQ*PGLGKSCQDQF*ILPQP*R*MVQRLRPVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH  12141

Range 3: 11652 to 12140 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
389.2 bits(843) 0.0 161/163(99%) 0/163(0%) Plus/Minus
Query        2  SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHITPDL  490
                SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVY+ISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNI VNLSPTSHRTSKIGTVEHDLRYLRQISHITPDL
Subject  11652  SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYYISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNITVNLSPTSHRTSKIGTVEHDLRYLRQISHITPDL  12140

Range 4: 11412 to 11612 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
171.5 bits(368) 0.0 67/67(100%) 0/67(0%) Plus/Minus
Query      530  RVWVKVVKTSFEYFHSPSAEWCNDCVQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG  730
                RVWVKVVKTSFEYFHSPSAEWCNDCVQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG
Subject  11412  RVWVKVVKTSFEYFHSPSAEWCNDCVQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG  11612

Range 5: 11656 to 12141 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
369.9 bits(801) 0.0 160/162(99%) 0/162(0%) Minus/Plus
Query        1  SGVMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTLXXXXXXXR*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE  486
                SGVMWLICRRYLRSCSTVPILDVRWLVGLRFT IFWQVIAD*DWWTL*RIR*RTR*WIFSRW*FSRKVVQYPVHILIDTQWVVEM YTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE
Subject  11656  SGVMWLICRRYLRSCSTVPILDVRWLVGLRFTVIFWQVIAD*DWWTL*RIR*RTR*WIFSRW*FSRKVVQYPVHILIDTQWVVEM*YTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE  12141

Range 6: 11410 to 11583 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
141.3 bits(302) 0.0 58/58(100%) 0/58(0%) Minus/Plus
Query      559  MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNWTQSLHHSALGLWKYSK  732
                MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNWTQSLHHSALGLWKYSK
Subject  11410  MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNWTQSLHHSALGLWKYSK  11583

Range 7: 11771 to 12139 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
287.9 bits(622) 0.0 122/123(99%) 0/123(0%) Minus/Plus
Query        3  *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE  371
                *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRC IRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE
Subject  11771  *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCSIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE  12139

Range 8: 11540 to 11710 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
143.1 bits(306) 0.0 57/57(100%) 0/57(0%) Minus/Plus
Query      432  NRCTIQR*GCGSIQNWS*QLLPRPGYCCYDWGVKCSS*GQE*CG*FAADI*GRVRQY  602
                NRCTIQR*GCGSIQNWS*QLLPRPGYCCYDWGVKCSS*GQE*CG*FAADI*GRVRQY
Subject  11540  NRCTIQR*GCGSIQNWS*QLLPRPGYCCYDWGVKCSS*GQE*CG*FAADI*GRVRQY  11710

Range 9: 11411 to 11488 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.9 bits(131) 0.0 26/26(100%) 0/26(0%) Minus/Plus
Query      654  CQVRDIRILDEGRLV*Q*RYNATPYP  731
                CQVRDIRILDEGRLV*Q*RYNATPYP
Subject  11411  CQVRDIRILDEGRLV*Q*RYNATPYP  11488

Range 10: 11843 to 12139 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
235.2 bits(507) 0.0 99/99(100%) 0/99(0%) Plus/Minus
Query        3  LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI  299
                LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI
Subject  11843  LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI  12139

Range 11: 11537 to 11776 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
147.7 bits(316) 0.0 80/80(100%) 0/80(0%) Plus/Minus
Query      366  PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKXXXXXXXXXXXXDPPVITAITGSG*KLSRPVLNTSTALALNGATIA  605
                PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA
Subject  11537  PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA  11776

Range 12: 11411 to 11488 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.8 bits(133) 0.0 26/26(100%) 0/26(0%) Plus/Minus
Query      654  GIRCCVIALLLDKSSFIEDTNIPNLA  731
                GIRCCVIALLLDKSSFIEDTNIPNLA
Subject  11411  GIRCCVIALLLDKSSFIEDTNIPNLA  11488

Grapevine leafroll associated virus 3 isolate WA MR, complete genome

Sequence ID: GU983863.1 Length: 18498 Number of Matches: 12

Range 1: 11412 to 12140 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
571.2 bits(1243) 0.0 243/243(100%) 0/243(0%) Minus/Plus
Query        2  AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR  730
                AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR
Subject  11412  AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR  12140

Range 2: 11410 to 12141 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
551.4 bits(1197) 0.0 242/244(99%) 0/244(0%) Plus/Minus
Query        1  LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSXXXXXXXXNI*NRYCRTRP*ISAAN*PHHS*P*LEHLTPQS*QQ*PGLGKSCQDQF*ILPQP*R*MVQRLRPVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH  732
                LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSKP*PHKPPNI*NRYCRTRP*ISAAN*PHHS*P*LEHLTPQS*QQ*PGLGKSC+DQF*ILP P*R*MVQRLRPVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH
Subject  11410  LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSKP*PHKPPNI*NRYCRTRP*ISAAN*PHHS*P*LEHLTPQS*QQ*PGLGKSCRDQF*ILPLP*R*MVQRLRPVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH  12141

Range 3: 11652 to 12140 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
393.8 bits(853) 0.0 163/163(100%) 0/163(0%) Plus/Minus
Query        2  SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHITPDL  490
                SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHITPDL
Subject  11652  SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHITPDL  12140

Range 4: 11412 to 11612 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
167.4 bits(359) 0.0 65/67(97%) 0/67(0%) Plus/Minus
Query      530  RVWVKVVKTSFEYFHSPSAEWCNDCVQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG  730
                RVWVKVV+TSFEYFH PSAEWCNDCVQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG
Subject  11412  RVWVKVVETSFEYFHCPSAEWCNDCVQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG  11612

Range 5: 11656 to 12141 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
378.6 bits(820) 0.0 162/162(100%) 0/162(0%) Minus/Plus
Query        1  SGVMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTLXXXXXXXR*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE  486
                SGVMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTL*RIR*RTR*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE
Subject  11656  SGVMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTL*RIR*RTR*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE  12141

Range 6: 11410 to 11583 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
138.5 bits(296) 0.0 57/58(98%) 0/58(0%) Minus/Plus
Query      559  MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNWTQSLHHSALGLWKYSK  732
                MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNWTQSLHHSALG WKYSK
Subject  11410  MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNWTQSLHHSALGQWKYSK  11583

Range 7: 11771 to 12139 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
290.7 bits(628) 0.0 123/123(100%) 0/123(0%) Minus/Plus
Query        3  *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE  371
                *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE
Subject  11771  *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE  12139

Range 8: 11540 to 11710 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
136.2 bits(291) 0.0 55/57(96%) 0/57(0%) Minus/Plus
Query      432  NRCTIQR*GCGSIQNWS*QLLPRPGYCCYDWGVKCSS*GQE*CG*FAADI*GRVRQY  602
                NRCTIQR*G GSIQNWS QLLPRPGYCCYDWGVKCSS*GQE*CG*FAADI*GRVRQY
Subject  11540  NRCTIQR*GSGSIQNWSRQLLPRPGYCCYDWGVKCSS*GQE*CG*FAADI*GRVRQY  11710

Range 9: 11411 to 11488 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.9 bits(131) 0.0 26/26(100%) 0/26(0%) Minus/Plus
Query      654  CQVRDIRILDEGRLV*Q*RYNATPYP  731
                CQVRDIRILDEGRLV*Q*RYNATPYP
Subject  11411  CQVRDIRILDEGRLV*Q*RYNATPYP  11488

Range 10: 11843 to 12139 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
235.2 bits(507) 0.0 99/99(100%) 0/99(0%) Plus/Minus
Query        3  LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI  299
                LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI
Subject  11843  LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI  12139

Range 11: 11537 to 11776 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
147.7 bits(316) 0.0 80/80(100%) 0/80(0%) Plus/Minus
Query      366  PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKXXXXXXXXXXXXDPPVITAITGSG*KLSRPVLNTSTALALNGATIA  605
                PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA
Subject  11537  PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA  11776

Range 12: 11411 to 11488 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.8 bits(133) 0.0 26/26(100%) 0/26(0%) Plus/Minus
Query      654  GIRCCVIALLLDKSSFIEDTNIPNLA  731
                GIRCCVIALLLDKSSFIEDTNIPNLA
Subject  11411  GIRCCVIALLLDKSSFIEDTNIPNLA  11488

Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome

Sequence ID: KX756669.1 Length: 18313 Number of Matches: 12

Range 1: 11227 to 11955 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
571.2 bits(1243) 0.0 243/243(100%) 0/243(0%) Minus/Plus
Query        2  AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR  730
                AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR
Subject  11227  AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR  11955

Range 2: 11225 to 11956 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
553.7 bits(1202) 0.0 243/244(100%) 0/244(0%) Plus/Minus
Query        1  LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSXXXXXXXXNI*NRYCRTRP*ISAAN*PHHS*P*LEHLTPQS*QQ*PGLGKSCQDQF*ILPQP*R*MVQRLRPVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH  732
                LSQIYRPMNPVRLLSRVPDIH LLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSKP*PHKPPNI*NRYCRTRP*ISAAN*PHHS*P*LEHLTPQS*QQ*PGLGKSCQDQF*ILPQP*R*MVQRLRPVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH
Subject  11225  LSQIYRPMNPVRLLSRVPDIHFLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSKP*PHKPPNI*NRYCRTRP*ISAAN*PHHS*P*LEHLTPQS*QQ*PGLGKSCQDQF*ILPQP*R*MVQRLRPVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH  11956

Range 3: 11467 to 11955 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
391.9 bits(849) 0.0 162/163(99%) 0/163(0%) Plus/Minus
Query        2  SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHITPDL  490
                SPRFIDQ*IQYVCCPGYQIFI YFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHITPDL
Subject  11467  SPRFIDQ*IQYVCCPGYQIFIFYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHITPDL  11955

Range 4: 11227 to 11427 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
171.5 bits(368) 0.0 67/67(100%) 0/67(0%) Plus/Minus
Query      530  RVWVKVVKTSFEYFHSPSAEWCNDCVQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG  730
                RVWVKVVKTSFEYFHSPSAEWCNDCVQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG
Subject  11227  RVWVKVVKTSFEYFHSPSAEWCNDCVQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG  11427

Range 5: 11471 to 11956 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
377.3 bits(817) 0.0 161/162(99%) 0/162(0%) Minus/Plus
Query        1  SGVMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTLXXXXXXXR*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE  486
                SGVMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTL*RIR*RTR*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*+MNIWYPGQQTYWIHWSINLGE
Subject  11471  SGVMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTL*RIR*RTR*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*KMNIWYPGQQTYWIHWSINLGE  11956

Range 6: 11225 to 11398 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
141.3 bits(302) 0.0 58/58(100%) 0/58(0%) Minus/Plus
Query      559  MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNWTQSLHHSALGLWKYSK  732
                MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNWTQSLHHSALGLWKYSK
Subject  11225  MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNWTQSLHHSALGLWKYSK  11398

Range 7: 11586 to 11954 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
288.8 bits(624) 0.0 122/123(99%) 0/123(0%) Minus/Plus
Query        3  *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE  371
                *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSK+*ISGTRDNKRTGFIGL*IWE
Subject  11586  *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKK*ISGTRDNKRTGFIGL*IWE  11954

Range 8: 11355 to 11525 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
143.1 bits(306) 0.0 57/57(100%) 0/57(0%) Minus/Plus
Query      432  NRCTIQR*GCGSIQNWS*QLLPRPGYCCYDWGVKCSS*GQE*CG*FAADI*GRVRQY  602
                NRCTIQR*GCGSIQNWS*QLLPRPGYCCYDWGVKCSS*GQE*CG*FAADI*GRVRQY
Subject  11355  NRCTIQR*GCGSIQNWS*QLLPRPGYCCYDWGVKCSS*GQE*CG*FAADI*GRVRQY  11525

Range 9: 11226 to 11303 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.9 bits(131) 0.0 26/26(100%) 0/26(0%) Minus/Plus
Query      654  CQVRDIRILDEGRLV*Q*RYNATPYP  731
                CQVRDIRILDEGRLV*Q*RYNATPYP
Subject  11226  CQVRDIRILDEGRLV*Q*RYNATPYP  11303

Range 10: 11658 to 11954 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
235.2 bits(507) 0.0 99/99(100%) 0/99(0%) Plus/Minus
Query        3  LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI  299
                LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI
Subject  11658  LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI  11954

Range 11: 11352 to 11591 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
147.7 bits(316) 0.0 80/80(100%) 0/80(0%) Plus/Minus
Query      366  PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKXXXXXXXXXXXXDPPVITAITGSG*KLSRPVLNTSTALALNGATIA  605
                PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA
Subject  11352  PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA  11591

Range 12: 11226 to 11303 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.8 bits(133) 0.0 26/26(100%) 0/26(0%) Plus/Minus
Query      654  GIRCCVIALLLDKSSFIEDTNIPNLA  731
                GIRCCVIALLLDKSSFIEDTNIPNLA
Subject  11226  GIRCCVIALLLDKSSFIEDTNIPNLA  11303

Grapevine leafroll associated virus 3 isolate 623, complete genome

Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 13

Range 1: 11412 to 12140 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
567.1 bits(1234) 0.0 241/243(99%) 0/243(0%) Minus/Plus
Query        2  AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR  730
                AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFD+TDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDP ETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR
Subject  11412  AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDNTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPKETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR  12140

Range 2: 11652 to 12140 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
331.9 bits(718) 0.0 136/163(83%) 0/163(0%) Plus/Minus
Query        2  SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHITPDL  490
                SP FIDQ I YVCCPGYQIFILYFLT+N+NR+R+V G IKLR+VGL+WVSPTFRYAPERRFI*KS VILPFKYTV+HISTTHCVS+S+*TGYWTTFRENY+RLK+H+LVR*RIR SVHQSQSAITCQNI VNLSPT +RT KI  VEH+LRYLRQI HITPDL
Subject  11652  SPGFIDQRI*YVCCPGYQIFILYFLTVNNNRYRTVCG*IKLRYVGLFWVSPTFRYAPERRFI*KSPVILPFKYTVHHISTTHCVSVSV*TGYWTTFRENYYRLKVHHLVR*RIRQSVHQSQSAITCQNITVNLSPTGYRTPKISIVEHNLRYLRQIGHITPDL  12140

Range 3: 11412 to 11612 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
155.0 bits(332) 0.0 61/67(91%) 0/67(0%) Plus/Minus
Query      530  RVWVKVVKTSFEYFHSPSAEWCNDCVQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG  730
                RVW+KVVKT FE+FHSPSAEW N+CV FVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG
Subject  11412  RVWIKVVKTGFEHFHSPSAEWRNNCV*FVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG  11612

Range 4: 11410 to 12141 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
461.6 bits(1001) 0.0 209/244(86%) 0/244(0%) Plus/Minus
Query        1  LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSXXXXXXXXNI*NRYCRTRP*ISAAN*PHHS*P*LEHLTPQS*QQ*PGLGKSCQDQF*ILPQP*R*MVQRLRPVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH  732
                LS+IYRP N VRLLSRVPDIHSLLPH *+*Q P+R W +* A RRSLLGLPYVSIRPGTSVHLEK CYSPLQIYR PHLHHPLCI E MNRVLDYLSGKL P E+P PRPLAYS KCPPVSVRYYLPKY SKP*PH+ PN *N+YCRT+P*ISAAN PHHS*P*LEHLTPQS*QQ* GL KSCQD+F* LPQP*R*M Q+LR VRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH
Subject  11410  LSRIYRPTNLVRLLSRVPDIHSLLPHR*Q*QIPYRLWIN*IALRRSLLGLPYVSIRPGTSVHLEKPCYSPLQIYRTPHLHHPLCICECMNRVLDYLSGKLLPVESPPPRPLAYSSKCPPVSVRYYLPKYHSKP*PHRLPNT*NQYCRTQP*ISAANWPHHS*P*LEHLTPQS*QQ*QGLDKSCQDRF*TLPQP*R*MAQQLRLVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH  12141

Range 5: 11771 to 12139 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
235.2 bits(507) 0.0 101/123(82%) 0/123(0%) Minus/Plus
Query        3  *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE  371
                *RTETGGHF+EYANGRG G S G NFPER*SNTLFI+S IHSGWWRCG+RYI*RGE*Q FSK*TDVPGRIET*GRP RDRR A+* +H R G+CY * *GSKE*ISGTRDNKRT F+GL*I E
Subject  11771  *RTETGGHFDEYANGRGGGLSTGSNFPER*SNTLFIHSQIHSGWWRCGVRYI*RGE*QGFSK*TDVPGRIET*GRPKRDRRSAI*FIHRRYGICYC*R*GSKE*ISGTRDNKRTRFVGL*IRE  12139

Range 6: 11410 to 11583 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.9 bits(264) 0.0 54/58(93%) 0/58(0%) Minus/Plus
Query      559  MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNWTQSLHHSALGLWKYSK  732
                MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATN TQ L HSALGLWK SK
Subject  11410  MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATN*TQLLRHSALGLWKCSK  11583

Range 7: 11656 to 11796 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
95.9 bits(203) 0.0 39/47(83%) 0/47(0%) Minus/Plus
Query      346  SGVMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTL  486
                SGVMW ICRRYLR CST+ IL VR  VGLRFT IFWQVIAD*DWWTL
Subject  11656  SGVMWPICRRYLRLCSTILILGVR*PVGLRFTVIFWQVIAD*DWWTL  11796

Range 8: 11843 to 12139 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
229.3 bits(494) 0.0 96/99(97%) 0/99(0%) Plus/Minus
Query        3  LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI  299
                LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSV++LNCATSVS GSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI
Subject  11843  LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVDKLNCATSVSFGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI  12139

Range 9: 11537 to 11776 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
147.7 bits(316) 0.0 80/80(100%) 0/80(0%) Plus/Minus
Query      366  PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKXXXXXXXXXXXXDPPVITAITGSG*KLSRPVLNTSTALALNGATIA  605
                PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA
Subject  11537  PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA  11776

Range 10: 11411 to 11488 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.8 bits(133) 0.0 26/26(100%) 0/26(0%) Plus/Minus
Query      654  GIRCCVIALLLDKSSFIEDTNIPNLA  731
                GIRCCVIALLLDKSSFIEDTNIPNLA
Subject  11411  GIRCCVIALLLDKSSFIEDTNIPNLA  11488

Range 11: 11824 to 12141 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
200.4 bits(431) 0.0 87/106(82%) 0/106(0%) Minus/Plus
Query        1  WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE  318
                W F+R *FSRKVVQYPVH L DTQWVVEMW TVYLKGRIT LF*MNRRSGAYRNVGETQ RPT R+LI P+T R LL L VRK*RMNIWYPGQQTY I WSIN GE
Subject  11824  WTFNR**FSRKVVQYPVHTLTDTQWVVEMWCTVYLKGRITGLF*MNRRSGAYRNVGETQKRPT*RNLIYPQTVRYLLLLTVRK*RMNIWYPGQQTY*IRWSINPGE  12141

Range 12: 11540 to 11710 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
116.5 bits(248) 0.0 49/57(86%) 0/57(0%) Minus/Plus
Query      432  NRCTIQR*GCGSIQNWS*QLLPRPGYCCYDWGVKCSS*GQE*CG*FAADI*GRVRQY  602
                N C IQR*GCGS+QN S*QLL RP YCCYDWGVKCSS*GQE*CG FAADI*G VRQY
Subject  11540  NCCAIQR*GCGSVQNRS*QLLSRPCYCCYDWGVKCSS*GQE*CGQFAADI*GCVRQY  11710

Range 13: 11411 to 11488 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.9 bits(131) 0.0 26/26(100%) 0/26(0%) Minus/Plus
Query      654  CQVRDIRILDEGRLV*Q*RYNATPYP  731
                CQVRDIRILDEGRLV*Q*RYNATPYP
Subject  11411  CQVRDIRILDEGRLV*Q*RYNATPYP  11488

Nucleotide Sequence (954 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
96
192
288
384
480
576
672
768
864
954

Descriptions

Alignments

Grapevine leafroll associated virus 3 isolate 623, complete genome

Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 13

Range 1: 14085 to 14771 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
564.7 bits(1226) 0.0 228/229(100%) 0/229(0%) Minus/Minus
Query      267  LEDVV*GVIGRHRLISKRLLPS*IPC*YCVVIEQIVRRTNAVNRVRKEFRWYSMLCHDLFIHHQFTIQGRRDQGWREVC*ILPYRVFVTR*SGSLFNAIVYPHRIYLLSIVRFYVVELFELRRRRCKERASDLHHVQEEFCLGCCVIGAHNLLTQLYQCGINLHCYLY*YFSRLVNNFRFMGNPR*VQSYPLTHSL*ELVWIFLKNQLIWCKSLRFRHHPYIGFWWFHH  953
                LEDVV*GVIGRHRLISKRLL S*IPC*YCVVIEQIVRRTNAVNRVRKEFRWYSMLCHDLFIHHQFTIQGRRDQGWREVC*ILPYRVFVTR*SGSLFNAIVYPHRIYLLSIVRFYVVELFELRRRRCKERASDLHHVQEEFCLGCCVIGAHNLLTQLYQCGINLHCYLY*YFSRLVNNFRFMGNPR*VQSYPLTHSL*ELVWIFLKNQLIWCKSLRFRHHPYIGFWWFHH
Subject  14085  LEDVV*GVIGRHRLISKRLLSS*IPC*YCVVIEQIVRRTNAVNRVRKEFRWYSMLCHDLFIHHQFTIQGRRDQGWREVC*ILPYRVFVTR*SGSLFNAIVYPHRIYLLSIVRFYVVELFELRRRRCKERASDLHHVQEEFCLGCCVIGAHNLLTQLYQCGINLHCYLY*YFSRLVNNFRFMGNPR*VQSYPLTHSL*ELVWIFLKNQLIWCKSLRFRHHPYIGFWWFHH  14771

Range 2: 13819 to 14031 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
166.5 bits(357) 0.0 70/71(99%) 0/71(0%) Minus/Minus
Query        1  WRIRTFPALQRFLLTPPASRP*RILRNSPY*TFLVPHPLL*LSDCFRGQLHISALISVQTPSRPLNKNRTQ  213
                WRIRTFPALQRFLLTPPASRP*RILRNSPY*TFLVPHPLL*LSDCFRGQLHISALISVQTPSRPLNKN TQ
Subject  13819  WRIRTFPALQRFLLTPPASRP*RILRNSPY*TFLVPHPLL*LSDCFRGQLHISALISVQTPSRPLNKNHTQ  14031

Range 3: 13821 to 14771 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
708.1 bits(1539) 0.0 317/317(100%) 0/317(0%) Plus/Plus
Query        3  ECGFC*VDAMAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFXXXXXXXXXQEPPKQPTTQVVEPPEADIGVVPESETLTPNKLVFEKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDDTTTKTKFFLYVMQIACXXXXXXXXXXKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQ  953
                ECGFC*VDAMAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFATAALATAAQEPPKQPTTQVVEPPEADIGVVPESETLTPNKLVFEKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDDTTTKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQ
Subject  13821  ECGFC*VDAMAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFATAALATAAQEPPKQPTTQVVEPPEADIGVVPESETLTPNKLVFEKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDDTTTKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQ  14771

Range 4: 13820 to 14404 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
437.3 bits(948) 0.0 195/195(100%) 0/195(0%) Minus/Minus
Query        2  EDDVKNVQAICITYKKNFVLVVVSSEPITFLHSSTNAVLIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLSGSFSKTSLFGVRVSDSGTTPISASGGSTTCVVGCLGGSCXXXXXXXXANTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLRLFSGTTSYICPNFSSNAIASTQQKPHS  586
                EDDVKNVQAICITYKKNFVLVVVSSEPITFLHSSTNAVLIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLSGSFSKTSLFGVRVSDSGTTPISASGGSTTCVVGCLGGSCAAVAKAAVANTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLRLFSGTTSYICPNFSSNAIASTQQKPHS
Subject  13820  EDDVKNVQAICITYKKNFVLVVVSSEPITFLHSSTNAVLIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLSGSFSKTSLFGVRVSDSGTTPISASGGSTTCVVGCLGGSCAAVAKAAVANTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLRLFSGTTSYICPNFSSNAIASTQQKPHS  14404

Range 5: 14444 to 14770 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
265.5 bits(573) 0.0 109/109(100%) 0/109(0%) Minus/Minus
Query      626  WKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIAYGKNFGGTPCCAMTFSFITSLPFRVAVIKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP  952
                WKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIAYGKNFGGTPCCAMTFSFITSLPFRVAVIKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP
Subject  14444  WKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIAYGKNFGGTPCCAMTFSFITSLPFRVAVIKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP  14770

Range 6: 13820 to 14629 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
574.3 bits(1247) 0.0 269/270(100%) 0/270(0%) Plus/Plus
Query        2  *VRFLLSGRDGV*TEIRADI*SCPRKQSES*SRGCGTRKV**GEFLKIR*GRDAGGVNRNRCSAGKVRIRHSSFSYSGTGAT*AADNXXXXXXXXXXXXXXXI*DSYTK*AGF*ERSRQVLKDYG*GDSFGLNGGYP*TESY*RAGKSISRGSNED*YRIGRAV*EGYGLR*HNNQDKILLVRDADRLHVLYIVFDGVQRVRLHRNGRWKEDICGVGIRLH*TSCRFNGLRKPGKAVSSILHANLDHGDPEW*TGDE*KGHGTAWSTTEI  811
                *V FLLSGRDGV*TEIRADI*SCPRKQSES*SRGCGTRKV**GEFLKIR*GRDAGGVNRNRCSAGKVRIRHSSFSYSGTGAT*AADNASGGTTRSRYRGGAGI*DSYTK*AGF*ERSRQVLKDYG*GDSFGLNGGYP*TESY*RAGKSISRGSNED*YRIGRAV*EGYGLR*HNNQDKILLVRDADRLHVLYIVFDGVQRVRLHRNGRWKEDICGVGIRLH*TSCRFNGLRKPGKAVSSILHANLDHGDPEW*TGDE*KGHGTAWSTTEI
Subject  13820  *VWFLLSGRDGV*TEIRADI*SCPRKQSES*SRGCGTRKV**GEFLKIR*GRDAGGVNRNRCSAGKVRIRHSSFSYSGTGAT*AADNASGGTTRSRYRGGAGI*DSYTK*AGF*ERSRQVLKDYG*GDSFGLNGGYP*TESY*RAGKSISRGSNED*YRIGRAV*EGYGLR*HNNQDKILLVRDADRLHVLYIVFDGVQRVRLHRNGRWKEDICGVGIRLH*TSCRFNGLRKPGKAVSSILHANLDHGDPEW*TGDE*KGHGTAWSTTEI  14629

Range 7: 14687 to 14770 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
60.2 bits(125) 0.0 27/28(96%) 0/28(0%) Plus/Plus
Query      869  NTSMEFS*AAGV*K*DGDGR*HLTQRLP  952
                NTSMEFS* AGV*K*DGDGR*HLTQRLP
Subject  14687  NTSMEFS*TAGV*K*DGDGR*HLTQRLP  14770

Range 8: 14443 to 14772 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
250.8 bits(541) 0.0 109/110(99%) 0/110(0%) Plus/Plus
Query      625  MERRYMRCGYTIALNKLPLQRVTKTR*GSI*HTSRQP*SRRP*MVNW**MKRSWHSMEYHRNSFRTRLTAFVRRTICSITTQY*HGI*LGSRRLEIRR*RPITPYTTSSN  954
                MERRYMRCGYTIALNKLPLQRVTKTR*GSI*HTSRQP*SRRP*MVNW**MKRSWHSMEYHRNSFRTRLTAFVRRTICSITTQY*HGI*L SRRLEIRR*RPITPYTTSSN
Subject  14443  MERRYMRCGYTIALNKLPLQRVTKTR*GSI*HTSRQP*SRRP*MVNW**MKRSWHSMEYHRNSFRTRLTAFVRRTICSITTQY*HGI*LDSRRLEIRR*RPITPYTTSSN  14772

Range 9: 14083 to 14373 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
239.3 bits(516) 0.0 97/97(100%) 0/97(0%) Plus/Plus
Query      265  KWWNHQKPI*GWCRNLRLLHQISWFLRKIQTSS*RLWVRG*LWT*RGLPINRKLLTSREKYQ*R*Q*RLIPHW*SCVRRLWAPMTQQPRQNSSCT*C  555
                KWWNHQKPI*GWCRNLRLLHQISWFLRKIQTSS*RLWVRG*LWT*RGLPINRKLLTSREKYQ*R*Q*RLIPHW*SCVRRLWAPMTQQPRQNSSCT*C
Subject  14083  KWWNHQKPI*GWCRNLRLLHQISWFLRKIQTSS*RLWVRG*LWT*RGLPINRKLLTSREKYQ*R*Q*RLIPHW*SCVRRLWAPMTQQPRQNSSCT*C  14373

Range 10: 13819 to 14031 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
156.9 bits(336) 0.0 70/71(99%) 0/71(0%) Plus/Plus
Query        1  LSAVFVEWTRWRLN*N*GRYMKLSPKTI*ELE*GMRHKESLVRRVS*NTLRTGRRRS*QESL*CRKSTYSP  213
                LS VFVEWTRWRLN*N*GRYMKLSPKTI*ELE*GMRHKESLVRRVS*NTLRTGRRRS*QESL*CRKSTYSP
Subject  13819  LSVVFVEWTRWRLN*N*GRYMKLSPKTI*ELE*GMRHKESLVRRVS*NTLRTGRRRS*QESL*CRKSTYSP  14031

Range 11: 14281 to 14772 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
378.6 bits(820) 0.0 163/164(99%) 0/164(0%) Minus/Minus
Query      463  VGRRCVRCYRPSPSYF*TPAA*LNSMLVLRRY*TDRTSDERSQSRTERISVVLHAVP*PFHSSPVYHSGSP*SRLA*SMLDTALPGFRNPLKRQLV*CNRIPTPHISSFHRPFLCSRTL*TPSKTM*RTCKRSASRTRRILSWLLCHRSP*PSYTALPMRY*SS  954
                VGRRCVRCYRPSPSYF*TPA *LNSMLVLRRY*TDRTSDERSQSRTERISVVLHAVP*PFHSSPVYHSGSP*SRLA*SMLDTALPGFRNPLKRQLV*CNRIPTPHISSFHRPFLCSRTL*TPSKTM*RTCKRSASRTRRILSWLLCHRSP*PSYTALPMRY*SS
Subject  14281  VGRRCVRCYRPSPSYF*TPAV*LNSMLVLRRY*TDRTSDERSQSRTERISVVLHAVP*PFHSSPVYHSGSP*SRLA*SMLDTALPGFRNPLKRQLV*CNRIPTPHISSFHRPFLCSRTL*TPSKTM*RTCKRSASRTRRILSWLLCHRSP*PSYTALPMRY*SS  14772

Range 12: 13821 to 14030 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
165.1 bits(354) 0.0 69/70(99%) 0/70(0%) Minus/Minus
Query        3  GEYVLFRHYSDSC*LRLRPVLNVF*ETRLTKLSLCRIPYSNSQIVFGDNFIYLP*FQFKRHRVHSTKTAL  212
                GEYVLFRHYSDSC*LRLRPVLNVF*ETRLTKLSLCRIPYSNSQIVFGDNFIYLP*FQFKRHRVHSTKT L
Subject  13821  GEYVLFRHYSDSC*LRLRPVLNVF*ETRLTKLSLCRIPYSNSQIVFGDNFIYLP*FQFKRHRVHSTKTTL  14030

Range 13: 14125 to 14181 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.1 bits(92) 0.0 19/19(100%) 0/19(0%) Minus/Minus
Query      307  RTCLDLSQKPAYLV*ESQI  363
                RTCLDLSQKPAYLV*ESQI
Subject  14125  RTCLDLSQKPAYLV*ESQI  14181

Grapevine leafroll associated virus 3 isolate 3 3 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130283.1 Length: 4711 Number of Matches: 13

Range 1: 354 to 1040 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
564.7 bits(1226) 0.0 228/229(100%) 0/229(0%) Minus/Minus
Query      267  LEDVV*GVIGRHRLISKRLLPS*IPC*YCVVIEQIVRRTNAVNRVRKEFRWYSMLCHDLFIHHQFTIQGRRDQGWREVC*ILPYRVFVTR*SGSLFNAIVYPHRIYLLSIVRFYVVELFELRRRRCKERASDLHHVQEEFCLGCCVIGAHNLLTQLYQCGINLHCYLY*YFSRLVNNFRFMGNPR*VQSYPLTHSL*ELVWIFLKNQLIWCKSLRFRHHPYIGFWWFHH  953
                LEDVV*GVIGRHRLISKRLL S*IPC*YCVVIEQIVRRTNAVNRVRKEFRWYSMLCHDLFIHHQFTIQGRRDQGWREVC*ILPYRVFVTR*SGSLFNAIVYPHRIYLLSIVRFYVVELFELRRRRCKERASDLHHVQEEFCLGCCVIGAHNLLTQLYQCGINLHCYLY*YFSRLVNNFRFMGNPR*VQSYPLTHSL*ELVWIFLKNQLIWCKSLRFRHHPYIGFWWFHH
Subject    354  LEDVV*GVIGRHRLISKRLLSS*IPC*YCVVIEQIVRRTNAVNRVRKEFRWYSMLCHDLFIHHQFTIQGRRDQGWREVC*ILPYRVFVTR*SGSLFNAIVYPHRIYLLSIVRFYVVELFELRRRRCKERASDLHHVQEEFCLGCCVIGAHNLLTQLYQCGINLHCYLY*YFSRLVNNFRFMGNPR*VQSYPLTHSL*ELVWIFLKNQLIWCKSLRFRHHPYIGFWWFHH  1040

Range 2: 88 to 300 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
166.5 bits(357) 0.0 70/71(99%) 0/71(0%) Minus/Minus
Query        1  WRIRTFPALQRFLLTPPASRP*RILRNSPY*TFLVPHPLL*LSDCFRGQLHISALISVQTPSRPLNKNRTQ  213
                WRIRTFPALQRFLLTPPASRP*RILRNSPY*TFLVPHPLL*LSDCFRGQLHISALISVQTPSRPLNKN TQ
Subject     88  WRIRTFPALQRFLLTPPASRP*RILRNSPY*TFLVPHPLL*LSDCFRGQLHISALISVQTPSRPLNKNHTQ  300

Range 3: 90 to 1040 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
704.4 bits(1531) 0.0 316/317(100%) 0/317(0%) Plus/Plus
Query        3  ECGFC*VDAMAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFXXXXXXXXXQEPPKQPTTQVVEPPEADIGVVPESETLTPNKLVFEKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDDTTTKTKFFLYVMQIACXXXXXXXXXXKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQ  953
                ECGFC*VDAMAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFATAALATAAQEP KQPTTQVVEPPEADIGVVPESETLTPNKLVFEKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDDTTTKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQ
Subject     90  ECGFC*VDAMAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFATAALATAAQEPSKQPTTQVVEPPEADIGVVPESETLTPNKLVFEKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDDTTTKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQ  1040

Range 4: 89 to 673 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
434.1 bits(941) 0.0 194/195(99%) 0/195(0%) Minus/Minus
Query        2  EDDVKNVQAICITYKKNFVLVVVSSEPITFLHSSTNAVLIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLSGSFSKTSLFGVRVSDSGTTPISASGGSTTCVVGCLGGSCXXXXXXXXANTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLRLFSGTTSYICPNFSSNAIASTQQKPHS  586
                EDDVKNVQAICITYKKNFVLVVVSSEPITFLHSSTNAVLIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLSGSFSKTSLFGVRVSDSGTTPISASGGSTTCVVGCL GSCAAVAKAAVANTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLRLFSGTTSYICPNFSSNAIASTQQKPHS
Subject     89  EDDVKNVQAICITYKKNFVLVVVSSEPITFLHSSTNAVLIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLSGSFSKTSLFGVRVSDSGTTPISASGGSTTCVVGCLDGSCAAVAKAAVANTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLRLFSGTTSYICPNFSSNAIASTQQKPHS  673

Range 5: 713 to 1039 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
265.5 bits(573) 0.0 109/109(100%) 0/109(0%) Minus/Minus
Query      626  WKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIAYGKNFGGTPCCAMTFSFITSLPFRVAVIKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP  952
                WKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIAYGKNFGGTPCCAMTFSFITSLPFRVAVIKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP
Subject    713  WKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIAYGKNFGGTPCCAMTFSFITSLPFRVAVIKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP  1039

Range 6: 89 to 898 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
571.5 bits(1241) 0.0 268/270(99%) 0/270(0%) Plus/Plus
Query        2  *VRFLLSGRDGV*TEIRADI*SCPRKQSES*SRGCGTRKV**GEFLKIR*GRDAGGVNRNRCSAGKVRIRHSSFSYSGTGAT*AADNXXXXXXXXXXXXXXXI*DSYTK*AGF*ERSRQVLKDYG*GDSFGLNGGYP*TESY*RAGKSISRGSNED*YRIGRAV*EGYGLR*HNNQDKILLVRDADRLHVLYIVFDGVQRVRLHRNGRWKEDICGVGIRLH*TSCRFNGLRKPGKAVSSILHANLDHGDPEW*TGDE*KGHGTAWSTTEI  811
                *V FLLSGRDGV*TEIRADI*SCPRKQSES*SRGCGTRKV**GEFLKIR*GRDAGGVNRNRCSAGKVRIRHSSFSYSGTGA *AADNASGGTTRSRYRGGAGI*DSYTK*AGF*ERSRQVLKDYG*GDSFGLNGGYP*TESY*RAGKSISRGSNED*YRIGRAV*EGYGLR*HNNQDKILLVRDADRLHVLYIVFDGVQRVRLHRNGRWKEDICGVGIRLH*TSCRFNGLRKPGKAVSSILHANLDHGDPEW*TGDE*KGHGTAWSTTEI
Subject     89  *VWFLLSGRDGV*TEIRADI*SCPRKQSES*SRGCGTRKV**GEFLKIR*GRDAGGVNRNRCSAGKVRIRHSSFSYSGTGAI*AADNASGGTTRSRYRGGAGI*DSYTK*AGF*ERSRQVLKDYG*GDSFGLNGGYP*TESY*RAGKSISRGSNED*YRIGRAV*EGYGLR*HNNQDKILLVRDADRLHVLYIVFDGVQRVRLHRNGRWKEDICGVGIRLH*TSCRFNGLRKPGKAVSSILHANLDHGDPEW*TGDE*KGHGTAWSTTEI  898

Range 7: 956 to 1039 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
60.2 bits(125) 0.0 27/28(96%) 0/28(0%) Plus/Plus
Query      869  NTSMEFS*AAGV*K*DGDGR*HLTQRLP  952
                NTSMEFS* AGV*K*DGDGR*HLTQRLP
Subject    956  NTSMEFS*TAGV*K*DGDGR*HLTQRLP  1039

Range 8: 712 to 1041 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
250.8 bits(541) 0.0 109/110(99%) 0/110(0%) Plus/Plus
Query      625  MERRYMRCGYTIALNKLPLQRVTKTR*GSI*HTSRQP*SRRP*MVNW**MKRSWHSMEYHRNSFRTRLTAFVRRTICSITTQY*HGI*LGSRRLEIRR*RPITPYTTSSN  954
                MERRYMRCGYTIALNKLPLQRVTKTR*GSI*HTSRQP*SRRP*MVNW**MKRSWHSMEYHRNSFRTRLTAFVRRTICSITTQY*HGI*L SRRLEIRR*RPITPYTTSSN
Subject    712  MERRYMRCGYTIALNKLPLQRVTKTR*GSI*HTSRQP*SRRP*MVNW**MKRSWHSMEYHRNSFRTRLTAFVRRTICSITTQY*HGI*LDSRRLEIRR*RPITPYTTSSN  1041

Range 9: 352 to 642 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
239.3 bits(516) 0.0 97/97(100%) 0/97(0%) Plus/Plus
Query      265  KWWNHQKPI*GWCRNLRLLHQISWFLRKIQTSS*RLWVRG*LWT*RGLPINRKLLTSREKYQ*R*Q*RLIPHW*SCVRRLWAPMTQQPRQNSSCT*C  555
                KWWNHQKPI*GWCRNLRLLHQISWFLRKIQTSS*RLWVRG*LWT*RGLPINRKLLTSREKYQ*R*Q*RLIPHW*SCVRRLWAPMTQQPRQNSSCT*C
Subject    352  KWWNHQKPI*GWCRNLRLLHQISWFLRKIQTSS*RLWVRG*LWT*RGLPINRKLLTSREKYQ*R*Q*RLIPHW*SCVRRLWAPMTQQPRQNSSCT*C  642

Range 10: 88 to 300 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
156.9 bits(336) 0.0 70/71(99%) 0/71(0%) Plus/Plus
Query        1  LSAVFVEWTRWRLN*N*GRYMKLSPKTI*ELE*GMRHKESLVRRVS*NTLRTGRRRS*QESL*CRKSTYSP  213
                LS VFVEWTRWRLN*N*GRYMKLSPKTI*ELE*GMRHKESLVRRVS*NTLRTGRRRS*QESL*CRKSTYSP
Subject     88  LSVVFVEWTRWRLN*N*GRYMKLSPKTI*ELE*GMRHKESLVRRVS*NTLRTGRRRS*QESL*CRKSTYSP  300

Range 11: 550 to 1041 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
378.6 bits(820) 0.0 163/164(99%) 0/164(0%) Minus/Minus
Query      463  VGRRCVRCYRPSPSYF*TPAA*LNSMLVLRRY*TDRTSDERSQSRTERISVVLHAVP*PFHSSPVYHSGSP*SRLA*SMLDTALPGFRNPLKRQLV*CNRIPTPHISSFHRPFLCSRTL*TPSKTM*RTCKRSASRTRRILSWLLCHRSP*PSYTALPMRY*SS  954
                VGRRCVRCYRPSPSYF*TPA *LNSMLVLRRY*TDRTSDERSQSRTERISVVLHAVP*PFHSSPVYHSGSP*SRLA*SMLDTALPGFRNPLKRQLV*CNRIPTPHISSFHRPFLCSRTL*TPSKTM*RTCKRSASRTRRILSWLLCHRSP*PSYTALPMRY*SS
Subject    550  VGRRCVRCYRPSPSYF*TPAV*LNSMLVLRRY*TDRTSDERSQSRTERISVVLHAVP*PFHSSPVYHSGSP*SRLA*SMLDTALPGFRNPLKRQLV*CNRIPTPHISSFHRPFLCSRTL*TPSKTM*RTCKRSASRTRRILSWLLCHRSP*PSYTALPMRY*SS  1041

Range 12: 90 to 299 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
165.1 bits(354) 0.0 69/70(99%) 0/70(0%) Minus/Minus
Query        3  GEYVLFRHYSDSC*LRLRPVLNVF*ETRLTKLSLCRIPYSNSQIVFGDNFIYLP*FQFKRHRVHSTKTAL  212
                GEYVLFRHYSDSC*LRLRPVLNVF*ETRLTKLSLCRIPYSNSQIVFGDNFIYLP*FQFKRHRVHSTKT L
Subject     90  GEYVLFRHYSDSC*LRLRPVLNVF*ETRLTKLSLCRIPYSNSQIVFGDNFIYLP*FQFKRHRVHSTKTTL  299

Range 13: 394 to 450 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.1 bits(92) 0.0 19/19(100%) 0/19(0%) Minus/Minus
Query      307  RTCLDLSQKPAYLV*ESQI  363
                RTCLDLSQKPAYLV*ESQI
Subject    394  RTCLDLSQKPAYLV*ESQI  450

Grapevine leafroll associated virus 3 isolate 3 5 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130284.1 Length: 4711 Number of Matches: 13

Range 1: 354 to 1040 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
564.7 bits(1226) 0.0 228/229(100%) 0/229(0%) Minus/Minus
Query      267  LEDVV*GVIGRHRLISKRLLPS*IPC*YCVVIEQIVRRTNAVNRVRKEFRWYSMLCHDLFIHHQFTIQGRRDQGWREVC*ILPYRVFVTR*SGSLFNAIVYPHRIYLLSIVRFYVVELFELRRRRCKERASDLHHVQEEFCLGCCVIGAHNLLTQLYQCGINLHCYLY*YFSRLVNNFRFMGNPR*VQSYPLTHSL*ELVWIFLKNQLIWCKSLRFRHHPYIGFWWFHH  953
                LEDVV*GVIGRHRLISKRLL S*IPC*YCVVIEQIVRRTNAVNRVRKEFRWYSMLCHDLFIHHQFTIQGRRDQGWREVC*ILPYRVFVTR*SGSLFNAIVYPHRIYLLSIVRFYVVELFELRRRRCKERASDLHHVQEEFCLGCCVIGAHNLLTQLYQCGINLHCYLY*YFSRLVNNFRFMGNPR*VQSYPLTHSL*ELVWIFLKNQLIWCKSLRFRHHPYIGFWWFHH
Subject    354  LEDVV*GVIGRHRLISKRLLSS*IPC*YCVVIEQIVRRTNAVNRVRKEFRWYSMLCHDLFIHHQFTIQGRRDQGWREVC*ILPYRVFVTR*SGSLFNAIVYPHRIYLLSIVRFYVVELFELRRRRCKERASDLHHVQEEFCLGCCVIGAHNLLTQLYQCGINLHCYLY*YFSRLVNNFRFMGNPR*VQSYPLTHSL*ELVWIFLKNQLIWCKSLRFRHHPYIGFWWFHH  1040

Range 2: 88 to 300 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
166.5 bits(357) 0.0 70/71(99%) 0/71(0%) Minus/Minus
Query        1  WRIRTFPALQRFLLTPPASRP*RILRNSPY*TFLVPHPLL*LSDCFRGQLHISALISVQTPSRPLNKNRTQ  213
                WRIRTFPALQRFLLTPPASRP*RILRNSPY*TFLVPHPLL*LSDCFRGQLHISALISVQTPSRPLNKN TQ
Subject     88  WRIRTFPALQRFLLTPPASRP*RILRNSPY*TFLVPHPLL*LSDCFRGQLHISALISVQTPSRPLNKNHTQ  300

Range 3: 90 to 1040 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
708.1 bits(1539) 0.0 317/317(100%) 0/317(0%) Plus/Plus
Query        3  ECGFC*VDAMAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFXXXXXXXXXQEPPKQPTTQVVEPPEADIGVVPESETLTPNKLVFEKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDDTTTKTKFFLYVMQIACXXXXXXXXXXKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQ  953
                ECGFC*VDAMAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFATAALATAAQEPPKQPTTQVVEPPEADIGVVPESETLTPNKLVFEKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDDTTTKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQ
Subject     90  ECGFC*VDAMAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFATAALATAAQEPPKQPTTQVVEPPEADIGVVPESETLTPNKLVFEKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDDTTTKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQ  1040

Range 4: 89 to 673 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
437.3 bits(948) 0.0 195/195(100%) 0/195(0%) Minus/Minus
Query        2  EDDVKNVQAICITYKKNFVLVVVSSEPITFLHSSTNAVLIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLSGSFSKTSLFGVRVSDSGTTPISASGGSTTCVVGCLGGSCXXXXXXXXANTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLRLFSGTTSYICPNFSSNAIASTQQKPHS  586
                EDDVKNVQAICITYKKNFVLVVVSSEPITFLHSSTNAVLIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLSGSFSKTSLFGVRVSDSGTTPISASGGSTTCVVGCLGGSCAAVAKAAVANTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLRLFSGTTSYICPNFSSNAIASTQQKPHS
Subject     89  EDDVKNVQAICITYKKNFVLVVVSSEPITFLHSSTNAVLIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLSGSFSKTSLFGVRVSDSGTTPISASGGSTTCVVGCLGGSCAAVAKAAVANTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLRLFSGTTSYICPNFSSNAIASTQQKPHS  673

Range 5: 713 to 1039 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
265.5 bits(573) 0.0 109/109(100%) 0/109(0%) Minus/Minus
Query      626  WKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIAYGKNFGGTPCCAMTFSFITSLPFRVAVIKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP  952
                WKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIAYGKNFGGTPCCAMTFSFITSLPFRVAVIKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP
Subject    713  WKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIAYGKNFGGTPCCAMTFSFITSLPFRVAVIKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP  1039

Range 6: 89 to 898 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
574.3 bits(1247) 0.0 269/270(100%) 0/270(0%) Plus/Plus
Query        2  *VRFLLSGRDGV*TEIRADI*SCPRKQSES*SRGCGTRKV**GEFLKIR*GRDAGGVNRNRCSAGKVRIRHSSFSYSGTGAT*AADNXXXXXXXXXXXXXXXI*DSYTK*AGF*ERSRQVLKDYG*GDSFGLNGGYP*TESY*RAGKSISRGSNED*YRIGRAV*EGYGLR*HNNQDKILLVRDADRLHVLYIVFDGVQRVRLHRNGRWKEDICGVGIRLH*TSCRFNGLRKPGKAVSSILHANLDHGDPEW*TGDE*KGHGTAWSTTEI  811
                *V FLLSGRDGV*TEIRADI*SCPRKQSES*SRGCGTRKV**GEFLKIR*GRDAGGVNRNRCSAGKVRIRHSSFSYSGTGAT*AADNASGGTTRSRYRGGAGI*DSYTK*AGF*ERSRQVLKDYG*GDSFGLNGGYP*TESY*RAGKSISRGSNED*YRIGRAV*EGYGLR*HNNQDKILLVRDADRLHVLYIVFDGVQRVRLHRNGRWKEDICGVGIRLH*TSCRFNGLRKPGKAVSSILHANLDHGDPEW*TGDE*KGHGTAWSTTEI
Subject     89  *VWFLLSGRDGV*TEIRADI*SCPRKQSES*SRGCGTRKV**GEFLKIR*GRDAGGVNRNRCSAGKVRIRHSSFSYSGTGAT*AADNASGGTTRSRYRGGAGI*DSYTK*AGF*ERSRQVLKDYG*GDSFGLNGGYP*TESY*RAGKSISRGSNED*YRIGRAV*EGYGLR*HNNQDKILLVRDADRLHVLYIVFDGVQRVRLHRNGRWKEDICGVGIRLH*TSCRFNGLRKPGKAVSSILHANLDHGDPEW*TGDE*KGHGTAWSTTEI  898

Range 7: 956 to 1039 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
60.2 bits(125) 0.0 27/28(96%) 0/28(0%) Plus/Plus
Query      869  NTSMEFS*AAGV*K*DGDGR*HLTQRLP  952
                NTSMEFS* AGV*K*DGDGR*HLTQRLP
Subject    956  NTSMEFS*TAGV*K*DGDGR*HLTQRLP  1039

Range 8: 712 to 1041 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
250.8 bits(541) 0.0 109/110(99%) 0/110(0%) Plus/Plus
Query      625  MERRYMRCGYTIALNKLPLQRVTKTR*GSI*HTSRQP*SRRP*MVNW**MKRSWHSMEYHRNSFRTRLTAFVRRTICSITTQY*HGI*LGSRRLEIRR*RPITPYTTSSN  954
                MERRYMRCGYTIALNKLPLQRVTKTR*GSI*HTSRQP*SRRP*MVNW**MKRSWHSMEYHRNSFRTRLTAFVRRTICSITTQY*HGI*L SRRLEIRR*RPITPYTTSSN
Subject    712  MERRYMRCGYTIALNKLPLQRVTKTR*GSI*HTSRQP*SRRP*MVNW**MKRSWHSMEYHRNSFRTRLTAFVRRTICSITTQY*HGI*LDSRRLEIRR*RPITPYTTSSN  1041

Range 9: 352 to 642 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
239.3 bits(516) 0.0 97/97(100%) 0/97(0%) Plus/Plus
Query      265  KWWNHQKPI*GWCRNLRLLHQISWFLRKIQTSS*RLWVRG*LWT*RGLPINRKLLTSREKYQ*R*Q*RLIPHW*SCVRRLWAPMTQQPRQNSSCT*C  555
                KWWNHQKPI*GWCRNLRLLHQISWFLRKIQTSS*RLWVRG*LWT*RGLPINRKLLTSREKYQ*R*Q*RLIPHW*SCVRRLWAPMTQQPRQNSSCT*C
Subject    352  KWWNHQKPI*GWCRNLRLLHQISWFLRKIQTSS*RLWVRG*LWT*RGLPINRKLLTSREKYQ*R*Q*RLIPHW*SCVRRLWAPMTQQPRQNSSCT*C  642

Range 10: 88 to 300 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
156.9 bits(336) 0.0 70/71(99%) 0/71(0%) Plus/Plus
Query        1  LSAVFVEWTRWRLN*N*GRYMKLSPKTI*ELE*GMRHKESLVRRVS*NTLRTGRRRS*QESL*CRKSTYSP  213
                LS VFVEWTRWRLN*N*GRYMKLSPKTI*ELE*GMRHKESLVRRVS*NTLRTGRRRS*QESL*CRKSTYSP
Subject     88  LSVVFVEWTRWRLN*N*GRYMKLSPKTI*ELE*GMRHKESLVRRVS*NTLRTGRRRS*QESL*CRKSTYSP  300

Range 11: 550 to 1041 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
378.6 bits(820) 0.0 163/164(99%) 0/164(0%) Minus/Minus
Query      463  VGRRCVRCYRPSPSYF*TPAA*LNSMLVLRRY*TDRTSDERSQSRTERISVVLHAVP*PFHSSPVYHSGSP*SRLA*SMLDTALPGFRNPLKRQLV*CNRIPTPHISSFHRPFLCSRTL*TPSKTM*RTCKRSASRTRRILSWLLCHRSP*PSYTALPMRY*SS  954
                VGRRCVRCYRPSPSYF*TPA *LNSMLVLRRY*TDRTSDERSQSRTERISVVLHAVP*PFHSSPVYHSGSP*SRLA*SMLDTALPGFRNPLKRQLV*CNRIPTPHISSFHRPFLCSRTL*TPSKTM*RTCKRSASRTRRILSWLLCHRSP*PSYTALPMRY*SS
Subject    550  VGRRCVRCYRPSPSYF*TPAV*LNSMLVLRRY*TDRTSDERSQSRTERISVVLHAVP*PFHSSPVYHSGSP*SRLA*SMLDTALPGFRNPLKRQLV*CNRIPTPHISSFHRPFLCSRTL*TPSKTM*RTCKRSASRTRRILSWLLCHRSP*PSYTALPMRY*SS  1041

Range 12: 90 to 299 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
165.1 bits(354) 0.0 69/70(99%) 0/70(0%) Minus/Minus
Query        3  GEYVLFRHYSDSC*LRLRPVLNVF*ETRLTKLSLCRIPYSNSQIVFGDNFIYLP*FQFKRHRVHSTKTAL  212
                GEYVLFRHYSDSC*LRLRPVLNVF*ETRLTKLSLCRIPYSNSQIVFGDNFIYLP*FQFKRHRVHSTKT L
Subject     90  GEYVLFRHYSDSC*LRLRPVLNVF*ETRLTKLSLCRIPYSNSQIVFGDNFIYLP*FQFKRHRVHSTKTTL  299

Range 13: 394 to 450 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.1 bits(92) 0.0 19/19(100%) 0/19(0%) Minus/Minus
Query      307  RTCLDLSQKPAYLV*ESQI  363
                RTCLDLSQKPAYLV*ESQI
Subject    394  RTCLDLSQKPAYLV*ESQI  450

Grapevine leafroll associated virus 3 isolate 3 12 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130287.1 Length: 4711 Number of Matches: 13

Range 1: 354 to 1040 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
564.7 bits(1226) 0.0 228/229(100%) 0/229(0%) Minus/Minus
Query      267  LEDVV*GVIGRHRLISKRLLPS*IPC*YCVVIEQIVRRTNAVNRVRKEFRWYSMLCHDLFIHHQFTIQGRRDQGWREVC*ILPYRVFVTR*SGSLFNAIVYPHRIYLLSIVRFYVVELFELRRRRCKERASDLHHVQEEFCLGCCVIGAHNLLTQLYQCGINLHCYLY*YFSRLVNNFRFMGNPR*VQSYPLTHSL*ELVWIFLKNQLIWCKSLRFRHHPYIGFWWFHH  953
                LEDVV*GVIGRHRLISKRLL S*IPC*YCVVIEQIVRRTNAVNRVRKEFRWYSMLCHDLFIHHQFTIQGRRDQGWREVC*ILPYRVFVTR*SGSLFNAIVYPHRIYLLSIVRFYVVELFELRRRRCKERASDLHHVQEEFCLGCCVIGAHNLLTQLYQCGINLHCYLY*YFSRLVNNFRFMGNPR*VQSYPLTHSL*ELVWIFLKNQLIWCKSLRFRHHPYIGFWWFHH
Subject    354  LEDVV*GVIGRHRLISKRLLSS*IPC*YCVVIEQIVRRTNAVNRVRKEFRWYSMLCHDLFIHHQFTIQGRRDQGWREVC*ILPYRVFVTR*SGSLFNAIVYPHRIYLLSIVRFYVVELFELRRRRCKERASDLHHVQEEFCLGCCVIGAHNLLTQLYQCGINLHCYLY*YFSRLVNNFRFMGNPR*VQSYPLTHSL*ELVWIFLKNQLIWCKSLRFRHHPYIGFWWFHH  1040

Range 2: 88 to 300 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
166.5 bits(357) 0.0 70/71(99%) 0/71(0%) Minus/Minus
Query        1  WRIRTFPALQRFLLTPPASRP*RILRNSPY*TFLVPHPLL*LSDCFRGQLHISALISVQTPSRPLNKNRTQ  213
                WRIRTFPALQRFLLTPPASRP*RILRNSPY*TFLVPHPLL*LSDCFRGQLHISALISVQTPSRPLNKN TQ
Subject     88  WRIRTFPALQRFLLTPPASRP*RILRNSPY*TFLVPHPLL*LSDCFRGQLHISALISVQTPSRPLNKNHTQ  300

Range 3: 90 to 1040 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
708.1 bits(1539) 0.0 317/317(100%) 0/317(0%) Plus/Plus
Query        3  ECGFC*VDAMAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFXXXXXXXXXQEPPKQPTTQVVEPPEADIGVVPESETLTPNKLVFEKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDDTTTKTKFFLYVMQIACXXXXXXXXXXKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQ  953
                ECGFC*VDAMAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFATAALATAAQEPPKQPTTQVVEPPEADIGVVPESETLTPNKLVFEKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDDTTTKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQ
Subject     90  ECGFC*VDAMAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFATAALATAAQEPPKQPTTQVVEPPEADIGVVPESETLTPNKLVFEKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDDTTTKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQ  1040

Range 4: 89 to 673 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
437.3 bits(948) 0.0 195/195(100%) 0/195(0%) Minus/Minus
Query        2  EDDVKNVQAICITYKKNFVLVVVSSEPITFLHSSTNAVLIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLSGSFSKTSLFGVRVSDSGTTPISASGGSTTCVVGCLGGSCXXXXXXXXANTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLRLFSGTTSYICPNFSSNAIASTQQKPHS  586
                EDDVKNVQAICITYKKNFVLVVVSSEPITFLHSSTNAVLIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLSGSFSKTSLFGVRVSDSGTTPISASGGSTTCVVGCLGGSCAAVAKAAVANTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLRLFSGTTSYICPNFSSNAIASTQQKPHS
Subject     89  EDDVKNVQAICITYKKNFVLVVVSSEPITFLHSSTNAVLIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLSGSFSKTSLFGVRVSDSGTTPISASGGSTTCVVGCLGGSCAAVAKAAVANTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLRLFSGTTSYICPNFSSNAIASTQQKPHS  673

Range 5: 713 to 1039 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
265.5 bits(573) 0.0 109/109(100%) 0/109(0%) Minus/Minus
Query      626  WKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIAYGKNFGGTPCCAMTFSFITSLPFRVAVIKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP  952
                WKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIAYGKNFGGTPCCAMTFSFITSLPFRVAVIKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP
Subject    713  WKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIAYGKNFGGTPCCAMTFSFITSLPFRVAVIKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP  1039

Range 6: 89 to 898 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
574.3 bits(1247) 0.0 269/270(100%) 0/270(0%) Plus/Plus
Query        2  *VRFLLSGRDGV*TEIRADI*SCPRKQSES*SRGCGTRKV**GEFLKIR*GRDAGGVNRNRCSAGKVRIRHSSFSYSGTGAT*AADNXXXXXXXXXXXXXXXI*DSYTK*AGF*ERSRQVLKDYG*GDSFGLNGGYP*TESY*RAGKSISRGSNED*YRIGRAV*EGYGLR*HNNQDKILLVRDADRLHVLYIVFDGVQRVRLHRNGRWKEDICGVGIRLH*TSCRFNGLRKPGKAVSSILHANLDHGDPEW*TGDE*KGHGTAWSTTEI  811
                *V FLLSGRDGV*TEIRADI*SCPRKQSES*SRGCGTRKV**GEFLKIR*GRDAGGVNRNRCSAGKVRIRHSSFSYSGTGAT*AADNASGGTTRSRYRGGAGI*DSYTK*AGF*ERSRQVLKDYG*GDSFGLNGGYP*TESY*RAGKSISRGSNED*YRIGRAV*EGYGLR*HNNQDKILLVRDADRLHVLYIVFDGVQRVRLHRNGRWKEDICGVGIRLH*TSCRFNGLRKPGKAVSSILHANLDHGDPEW*TGDE*KGHGTAWSTTEI
Subject     89  *VWFLLSGRDGV*TEIRADI*SCPRKQSES*SRGCGTRKV**GEFLKIR*GRDAGGVNRNRCSAGKVRIRHSSFSYSGTGAT*AADNASGGTTRSRYRGGAGI*DSYTK*AGF*ERSRQVLKDYG*GDSFGLNGGYP*TESY*RAGKSISRGSNED*YRIGRAV*EGYGLR*HNNQDKILLVRDADRLHVLYIVFDGVQRVRLHRNGRWKEDICGVGIRLH*TSCRFNGLRKPGKAVSSILHANLDHGDPEW*TGDE*KGHGTAWSTTEI  898

Range 7: 956 to 1039 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
60.2 bits(125) 0.0 27/28(96%) 0/28(0%) Plus/Plus
Query      869  NTSMEFS*AAGV*K*DGDGR*HLTQRLP  952
                NTSMEFS* AGV*K*DGDGR*HLTQRLP
Subject    956  NTSMEFS*TAGV*K*DGDGR*HLTQRLP  1039

Range 8: 712 to 1041 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
250.8 bits(541) 0.0 109/110(99%) 0/110(0%) Plus/Plus
Query      625  MERRYMRCGYTIALNKLPLQRVTKTR*GSI*HTSRQP*SRRP*MVNW**MKRSWHSMEYHRNSFRTRLTAFVRRTICSITTQY*HGI*LGSRRLEIRR*RPITPYTTSSN  954
                MERRYMRCGYTIALNKLPLQRVTKTR*GSI*HTSRQP*SRRP*MVNW**MKRSWHSMEYHRNSFRTRLTAFVRRTICSITTQY*HGI*L SRRLEIRR*RPITPYTTSSN
Subject    712  MERRYMRCGYTIALNKLPLQRVTKTR*GSI*HTSRQP*SRRP*MVNW**MKRSWHSMEYHRNSFRTRLTAFVRRTICSITTQY*HGI*LDSRRLEIRR*RPITPYTTSSN  1041

Range 9: 352 to 642 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
239.3 bits(516) 0.0 97/97(100%) 0/97(0%) Plus/Plus
Query      265  KWWNHQKPI*GWCRNLRLLHQISWFLRKIQTSS*RLWVRG*LWT*RGLPINRKLLTSREKYQ*R*Q*RLIPHW*SCVRRLWAPMTQQPRQNSSCT*C  555
                KWWNHQKPI*GWCRNLRLLHQISWFLRKIQTSS*RLWVRG*LWT*RGLPINRKLLTSREKYQ*R*Q*RLIPHW*SCVRRLWAPMTQQPRQNSSCT*C
Subject    352  KWWNHQKPI*GWCRNLRLLHQISWFLRKIQTSS*RLWVRG*LWT*RGLPINRKLLTSREKYQ*R*Q*RLIPHW*SCVRRLWAPMTQQPRQNSSCT*C  642

Range 10: 88 to 300 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
156.9 bits(336) 0.0 70/71(99%) 0/71(0%) Plus/Plus
Query        1  LSAVFVEWTRWRLN*N*GRYMKLSPKTI*ELE*GMRHKESLVRRVS*NTLRTGRRRS*QESL*CRKSTYSP  213
                LS VFVEWTRWRLN*N*GRYMKLSPKTI*ELE*GMRHKESLVRRVS*NTLRTGRRRS*QESL*CRKSTYSP
Subject     88  LSVVFVEWTRWRLN*N*GRYMKLSPKTI*ELE*GMRHKESLVRRVS*NTLRTGRRRS*QESL*CRKSTYSP  300

Range 11: 550 to 1041 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
378.6 bits(820) 0.0 163/164(99%) 0/164(0%) Minus/Minus
Query      463  VGRRCVRCYRPSPSYF*TPAA*LNSMLVLRRY*TDRTSDERSQSRTERISVVLHAVP*PFHSSPVYHSGSP*SRLA*SMLDTALPGFRNPLKRQLV*CNRIPTPHISSFHRPFLCSRTL*TPSKTM*RTCKRSASRTRRILSWLLCHRSP*PSYTALPMRY*SS  954
                VGRRCVRCYRPSPSYF*TPA *LNSMLVLRRY*TDRTSDERSQSRTERISVVLHAVP*PFHSSPVYHSGSP*SRLA*SMLDTALPGFRNPLKRQLV*CNRIPTPHISSFHRPFLCSRTL*TPSKTM*RTCKRSASRTRRILSWLLCHRSP*PSYTALPMRY*SS
Subject    550  VGRRCVRCYRPSPSYF*TPAV*LNSMLVLRRY*TDRTSDERSQSRTERISVVLHAVP*PFHSSPVYHSGSP*SRLA*SMLDTALPGFRNPLKRQLV*CNRIPTPHISSFHRPFLCSRTL*TPSKTM*RTCKRSASRTRRILSWLLCHRSP*PSYTALPMRY*SS  1041

Range 12: 90 to 299 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
165.1 bits(354) 0.0 69/70(99%) 0/70(0%) Minus/Minus
Query        3  GEYVLFRHYSDSC*LRLRPVLNVF*ETRLTKLSLCRIPYSNSQIVFGDNFIYLP*FQFKRHRVHSTKTAL  212
                GEYVLFRHYSDSC*LRLRPVLNVF*ETRLTKLSLCRIPYSNSQIVFGDNFIYLP*FQFKRHRVHSTKT L
Subject     90  GEYVLFRHYSDSC*LRLRPVLNVF*ETRLTKLSLCRIPYSNSQIVFGDNFIYLP*FQFKRHRVHSTKTTL  299

Range 13: 394 to 450 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.1 bits(92) 0.0 19/19(100%) 0/19(0%) Minus/Minus
Query      307  RTCLDLSQKPAYLV*ESQI  363
                RTCLDLSQKPAYLV*ESQI
Subject    394  RTCLDLSQKPAYLV*ESQI  450

Grapevine leafroll associated virus 3 isolate 3 13 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130288.1 Length: 4711 Number of Matches: 13

Range 1: 354 to 1040 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
564.7 bits(1226) 0.0 228/229(100%) 0/229(0%) Minus/Minus
Query      267  LEDVV*GVIGRHRLISKRLLPS*IPC*YCVVIEQIVRRTNAVNRVRKEFRWYSMLCHDLFIHHQFTIQGRRDQGWREVC*ILPYRVFVTR*SGSLFNAIVYPHRIYLLSIVRFYVVELFELRRRRCKERASDLHHVQEEFCLGCCVIGAHNLLTQLYQCGINLHCYLY*YFSRLVNNFRFMGNPR*VQSYPLTHSL*ELVWIFLKNQLIWCKSLRFRHHPYIGFWWFHH  953
                LEDVV*GVIGRHRLISKRLL S*IPC*YCVVIEQIVRRTNAVNRVRKEFRWYSMLCHDLFIHHQFTIQGRRDQGWREVC*ILPYRVFVTR*SGSLFNAIVYPHRIYLLSIVRFYVVELFELRRRRCKERASDLHHVQEEFCLGCCVIGAHNLLTQLYQCGINLHCYLY*YFSRLVNNFRFMGNPR*VQSYPLTHSL*ELVWIFLKNQLIWCKSLRFRHHPYIGFWWFHH
Subject    354  LEDVV*GVIGRHRLISKRLLSS*IPC*YCVVIEQIVRRTNAVNRVRKEFRWYSMLCHDLFIHHQFTIQGRRDQGWREVC*ILPYRVFVTR*SGSLFNAIVYPHRIYLLSIVRFYVVELFELRRRRCKERASDLHHVQEEFCLGCCVIGAHNLLTQLYQCGINLHCYLY*YFSRLVNNFRFMGNPR*VQSYPLTHSL*ELVWIFLKNQLIWCKSLRFRHHPYIGFWWFHH  1040

Range 2: 88 to 300 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
166.5 bits(357) 0.0 70/71(99%) 0/71(0%) Minus/Minus
Query        1  WRIRTFPALQRFLLTPPASRP*RILRNSPY*TFLVPHPLL*LSDCFRGQLHISALISVQTPSRPLNKNRTQ  213
                WRIRTFPALQRFLLTPPASRP*RILRNSPY*TFLVPHPLL*LSDCFRGQLHISALISVQTPSRPLNKN TQ
Subject     88  WRIRTFPALQRFLLTPPASRP*RILRNSPY*TFLVPHPLL*LSDCFRGQLHISALISVQTPSRPLNKNHTQ  300

Range 3: 90 to 1040 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
708.1 bits(1539) 0.0 317/317(100%) 0/317(0%) Plus/Plus
Query        3  ECGFC*VDAMAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFXXXXXXXXXQEPPKQPTTQVVEPPEADIGVVPESETLTPNKLVFEKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDDTTTKTKFFLYVMQIACXXXXXXXXXXKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQ  953
                ECGFC*VDAMAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFATAALATAAQEPPKQPTTQVVEPPEADIGVVPESETLTPNKLVFEKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDDTTTKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQ
Subject     90  ECGFC*VDAMAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFATAALATAAQEPPKQPTTQVVEPPEADIGVVPESETLTPNKLVFEKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDDTTTKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQ  1040

Range 4: 89 to 673 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
437.3 bits(948) 0.0 195/195(100%) 0/195(0%) Minus/Minus
Query        2  EDDVKNVQAICITYKKNFVLVVVSSEPITFLHSSTNAVLIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLSGSFSKTSLFGVRVSDSGTTPISASGGSTTCVVGCLGGSCXXXXXXXXANTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLRLFSGTTSYICPNFSSNAIASTQQKPHS  586
                EDDVKNVQAICITYKKNFVLVVVSSEPITFLHSSTNAVLIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLSGSFSKTSLFGVRVSDSGTTPISASGGSTTCVVGCLGGSCAAVAKAAVANTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLRLFSGTTSYICPNFSSNAIASTQQKPHS
Subject     89  EDDVKNVQAICITYKKNFVLVVVSSEPITFLHSSTNAVLIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLSGSFSKTSLFGVRVSDSGTTPISASGGSTTCVVGCLGGSCAAVAKAAVANTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLRLFSGTTSYICPNFSSNAIASTQQKPHS  673

Range 5: 713 to 1039 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
265.5 bits(573) 0.0 109/109(100%) 0/109(0%) Minus/Minus
Query      626  WKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIAYGKNFGGTPCCAMTFSFITSLPFRVAVIKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP  952
                WKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIAYGKNFGGTPCCAMTFSFITSLPFRVAVIKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP
Subject    713  WKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIAYGKNFGGTPCCAMTFSFITSLPFRVAVIKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP  1039

Range 6: 89 to 898 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
574.3 bits(1247) 0.0 269/270(100%) 0/270(0%) Plus/Plus
Query        2  *VRFLLSGRDGV*TEIRADI*SCPRKQSES*SRGCGTRKV**GEFLKIR*GRDAGGVNRNRCSAGKVRIRHSSFSYSGTGAT*AADNXXXXXXXXXXXXXXXI*DSYTK*AGF*ERSRQVLKDYG*GDSFGLNGGYP*TESY*RAGKSISRGSNED*YRIGRAV*EGYGLR*HNNQDKILLVRDADRLHVLYIVFDGVQRVRLHRNGRWKEDICGVGIRLH*TSCRFNGLRKPGKAVSSILHANLDHGDPEW*TGDE*KGHGTAWSTTEI  811
                *V FLLSGRDGV*TEIRADI*SCPRKQSES*SRGCGTRKV**GEFLKIR*GRDAGGVNRNRCSAGKVRIRHSSFSYSGTGAT*AADNASGGTTRSRYRGGAGI*DSYTK*AGF*ERSRQVLKDYG*GDSFGLNGGYP*TESY*RAGKSISRGSNED*YRIGRAV*EGYGLR*HNNQDKILLVRDADRLHVLYIVFDGVQRVRLHRNGRWKEDICGVGIRLH*TSCRFNGLRKPGKAVSSILHANLDHGDPEW*TGDE*KGHGTAWSTTEI
Subject     89  *VWFLLSGRDGV*TEIRADI*SCPRKQSES*SRGCGTRKV**GEFLKIR*GRDAGGVNRNRCSAGKVRIRHSSFSYSGTGAT*AADNASGGTTRSRYRGGAGI*DSYTK*AGF*ERSRQVLKDYG*GDSFGLNGGYP*TESY*RAGKSISRGSNED*YRIGRAV*EGYGLR*HNNQDKILLVRDADRLHVLYIVFDGVQRVRLHRNGRWKEDICGVGIRLH*TSCRFNGLRKPGKAVSSILHANLDHGDPEW*TGDE*KGHGTAWSTTEI  898

Range 7: 956 to 1039 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
60.2 bits(125) 0.0 27/28(96%) 0/28(0%) Plus/Plus
Query      869  NTSMEFS*AAGV*K*DGDGR*HLTQRLP  952
                NTSMEFS* AGV*K*DGDGR*HLTQRLP
Subject    956  NTSMEFS*TAGV*K*DGDGR*HLTQRLP  1039

Range 8: 712 to 1041 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
250.8 bits(541) 0.0 109/110(99%) 0/110(0%) Plus/Plus
Query      625  MERRYMRCGYTIALNKLPLQRVTKTR*GSI*HTSRQP*SRRP*MVNW**MKRSWHSMEYHRNSFRTRLTAFVRRTICSITTQY*HGI*LGSRRLEIRR*RPITPYTTSSN  954
                MERRYMRCGYTIALNKLPLQRVTKTR*GSI*HTSRQP*SRRP*MVNW**MKRSWHSMEYHRNSFRTRLTAFVRRTICSITTQY*HGI*L SRRLEIRR*RPITPYTTSSN
Subject    712  MERRYMRCGYTIALNKLPLQRVTKTR*GSI*HTSRQP*SRRP*MVNW**MKRSWHSMEYHRNSFRTRLTAFVRRTICSITTQY*HGI*LDSRRLEIRR*RPITPYTTSSN  1041

Range 9: 352 to 642 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
239.3 bits(516) 0.0 97/97(100%) 0/97(0%) Plus/Plus
Query      265  KWWNHQKPI*GWCRNLRLLHQISWFLRKIQTSS*RLWVRG*LWT*RGLPINRKLLTSREKYQ*R*Q*RLIPHW*SCVRRLWAPMTQQPRQNSSCT*C  555
                KWWNHQKPI*GWCRNLRLLHQISWFLRKIQTSS*RLWVRG*LWT*RGLPINRKLLTSREKYQ*R*Q*RLIPHW*SCVRRLWAPMTQQPRQNSSCT*C
Subject    352  KWWNHQKPI*GWCRNLRLLHQISWFLRKIQTSS*RLWVRG*LWT*RGLPINRKLLTSREKYQ*R*Q*RLIPHW*SCVRRLWAPMTQQPRQNSSCT*C  642

Range 10: 88 to 300 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
156.9 bits(336) 0.0 70/71(99%) 0/71(0%) Plus/Plus
Query        1  LSAVFVEWTRWRLN*N*GRYMKLSPKTI*ELE*GMRHKESLVRRVS*NTLRTGRRRS*QESL*CRKSTYSP  213
                LS VFVEWTRWRLN*N*GRYMKLSPKTI*ELE*GMRHKESLVRRVS*NTLRTGRRRS*QESL*CRKSTYSP
Subject     88  LSVVFVEWTRWRLN*N*GRYMKLSPKTI*ELE*GMRHKESLVRRVS*NTLRTGRRRS*QESL*CRKSTYSP  300

Range 11: 550 to 1041 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
378.6 bits(820) 0.0 163/164(99%) 0/164(0%) Minus/Minus
Query      463  VGRRCVRCYRPSPSYF*TPAA*LNSMLVLRRY*TDRTSDERSQSRTERISVVLHAVP*PFHSSPVYHSGSP*SRLA*SMLDTALPGFRNPLKRQLV*CNRIPTPHISSFHRPFLCSRTL*TPSKTM*RTCKRSASRTRRILSWLLCHRSP*PSYTALPMRY*SS  954
                VGRRCVRCYRPSPSYF*TPA *LNSMLVLRRY*TDRTSDERSQSRTERISVVLHAVP*PFHSSPVYHSGSP*SRLA*SMLDTALPGFRNPLKRQLV*CNRIPTPHISSFHRPFLCSRTL*TPSKTM*RTCKRSASRTRRILSWLLCHRSP*PSYTALPMRY*SS
Subject    550  VGRRCVRCYRPSPSYF*TPAV*LNSMLVLRRY*TDRTSDERSQSRTERISVVLHAVP*PFHSSPVYHSGSP*SRLA*SMLDTALPGFRNPLKRQLV*CNRIPTPHISSFHRPFLCSRTL*TPSKTM*RTCKRSASRTRRILSWLLCHRSP*PSYTALPMRY*SS  1041

Range 12: 90 to 299 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
165.1 bits(354) 0.0 69/70(99%) 0/70(0%) Minus/Minus
Query        3  GEYVLFRHYSDSC*LRLRPVLNVF*ETRLTKLSLCRIPYSNSQIVFGDNFIYLP*FQFKRHRVHSTKTAL  212
                GEYVLFRHYSDSC*LRLRPVLNVF*ETRLTKLSLCRIPYSNSQIVFGDNFIYLP*FQFKRHRVHSTKT L
Subject     90  GEYVLFRHYSDSC*LRLRPVLNVF*ETRLTKLSLCRIPYSNSQIVFGDNFIYLP*FQFKRHRVHSTKTTL  299

Range 13: 394 to 450 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.1 bits(92) 0.0 19/19(100%) 0/19(0%) Minus/Minus
Query      307  RTCLDLSQKPAYLV*ESQI  363
                RTCLDLSQKPAYLV*ESQI
Subject    394  RTCLDLSQKPAYLV*ESQI  450

Nucleotide Sequence (342 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
35
70
105
140
175
210
245
280
315
342

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
275.5 1465.2 33% 1.725e-72 99% KJ174518.1
275.5 1465.2 33% 1.725e-72 99% KX701860.1
273.2 1455.6 33% 8.44e-72 97% GQ352632.1
273.2 1457.4 33% 8.44e-72 97% EU259806.1
273.2 1460.1 33% 8.44e-72 97% KX756668.1

Alignments

Grapevine leafroll associated virus 3, complete genome

Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 8

Range 1: 4309 to 4650 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
275.5 bits(595) 0.0 113/114(99%) 0/114(0%) Plus/Minus
Query        1  HHHSLRYQRRIHHCHLQEPYHAESQMDPHLRHSRSPGNT*ASHHRHSSPQLVEHKQVEVWYR*ANPL*PKKRLA**AVATS*YSSLAKQPRERRTNYWRTPQTSKCSR*PSPQA  342
                HHHSLRYQRRIHHCHLQEPYHAESQMDPHLRHSRSPGNT*AS HRHSSPQLVEHKQVEVWYR*ANPL*PKKRLA**AVATS*YSSLAKQPRERRTNYWRTPQTSKCSR*PSPQA
Subject   4309  HHHSLRYQRRIHHCHLQEPYHAESQMDPHLRHSRSPGNT*ASRHRHSSPQLVEHKQVEVWYR*ANPL*PKKRLA**AVATS*YSSLAKQPRERRTNYWRTPQTSKCSR*PSPQA  4650

Range 2: 4311 to 4601 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
242.1 bits(522) 0.0 97/97(100%) 0/97(0%) Minus/Plus
Query       50  LGARASANTWKFGGFSNNWCAVPEVVWRGRSISSLLLPITLGASLVIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTRHDTVP  340
                LGARASANTWKFGGFSNNWCAVPEVVWRGRSISSLLLPITLGASLVIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTRHDTVP
Subject   4311  LGARASANTWKFGGFSNNWCAVPEVVWRGRSISSLLLPITLGASLVIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTRHDTVP  4601

Range 3: 4310 to 4612 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
236.1 bits(509) 0.0 100/101(99%) 0/101(0%) Minus/Plus
Query       39  AWGEG*REHLEVWGVLQ*LVRRSRGCLAREEYQLVATAYYARRFFGHKGFA*RYHTSTCLCSTS*GEECL**DA*VLPGLRL*RRCGSIWDSA*YGSWR*Q  341
                AWGEG*REHLEVWGVLQ*LVRRSRGCLAREEYQLVATAYYARRFFGHKGFA*RYHTSTCLCSTS*GEECL* DA*VLPGLRL*RRCGSIWDSA*YGSWR*Q
Subject   4310  AWGEG*REHLEVWGVLQ*LVRRSRGCLAREEYQLVATAYYARRFFGHKGFA*RYHTSTCLCSTS*GEECL*RDA*VLPGLRL*RRCGSIWDSA*YGSWR*Q  4612

Range 4: 4309 to 4650 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
233.8 bits(504) 0.0 113/114(99%) 0/114(0%) Minus/Plus
Query        1  CLGRGLARTLGSLGGSPIIGAPFPRLFGEGGVSXXXXXXXXXXXLWS*GVCLTIPYLNLLMFHQLRGGMSMMRRLGITGTSTMTKVRVHLGLGMIRFLEMTVMDPPLVSQAMMV  342
                CLGRGLARTLGSLGGSPIIGAPFPRLFGEGGVSARCYCLLR*ALLWS*GVCLTIPYLNLLMFHQLRGGMSM RRLGITGTSTMTKVRVHLGLGMIRFLEMTVMDPPLVSQAMMV
Subject   4309  CLGRGLARTLGSLGGSPIIGAPFPRLFGEGGVSARCYCLLR*ALLWS*GVCLTIPYLNLLMFHQLRGGMSMTRRLGITGTSTMTKVRVHLGLGMIRFLEMTVMDPPLVSQAMMV  4650

Range 5: 4446 to 4649 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
165.6 bits(355) 0.0 67/68(99%) 0/68(0%) Plus/Minus
Query        2  TIIA*DTRGGSITVISRNRIMPSPRWTRTFVIVEVPVIPKRLIIDIPPLNWWNISKLRYGIVKQTPYD  205
                TIIA*DTRGGSITVISRNRIMPSPRWTRTFVIVEVPVIPKRL+IDIPPLNWWNISKLRYGIVKQTPYD
Subject   4446  TIIA*DTRGGSITVISRNRIMPSPRWTRTFVIVEVPVIPKRLVIDIPPLNWWNISKLRYGIVKQTPYD  4649

Range 6: 4311 to 4406 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.1 bits(175) 0.0 32/32(100%) 0/32(0%) Plus/Minus
Query      245  DTPPSPNNLGNGAPIIGEPPKLPSVRASPRPK  340
                DTPPSPNNLGNGAPIIGEPPKLPSVRASPRPK
Subject   4311  DTPPSPNNLGNGAPIIGEPPKLPSVRASPRPK  4406

Range 7: 4310 to 4516 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
156.4 bits(335) 0.0 69/69(100%) 0/69(0%) Plus/Minus
Query      135  TFLPSTGGT*AS*GMVSLSKPLMTKEAPSVIGSSNELILLPRQTTSGTAHQLLENPPNFQVFALALAPS  341
                TFLPSTGGT*AS*GMVSLSKPLMTKEAPSVIGSSNELILLPRQTTSGTAHQLLENPPNFQVFALALAPS
Subject   4310  TFLPSTGGT*AS*GMVSLSKPLMTKEAPSVIGSSNELILLPRQTTSGTAHQLLENPPNFQVFALALAPS  4516

Range 8: 4562 to 4648 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.5 bits(152) 0.0 29/29(100%) 0/29(0%) Plus/Minus
Query        3  PS*LEIPEEDPSLSSPGTVSCRVPDGPAP  89
                PS*LEIPEEDPSLSSPGTVSCRVPDGPAP
Subject   4562  PS*LEIPEEDPSLSSPGTVSCRVPDGPAP  4648

Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome

Sequence ID: KX701860.1 Length: 18020 Number of Matches: 8

Range 1: 3827 to 4168 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
275.5 bits(595) 0.0 113/114(99%) 0/114(0%) Plus/Minus
Query        1  HHHSLRYQRRIHHCHLQEPYHAESQMDPHLRHSRSPGNT*ASHHRHSSPQLVEHKQVEVWYR*ANPL*PKKRLA**AVATS*YSSLAKQPRERRTNYWRTPQTSKCSR*PSPQA  342
                HHHSLRYQRRIHHCHLQEPYHAESQMDPHLRHSRSPGNT*AS HRHSSPQLVEHKQVEVWYR*ANPL*PKKRLA**AVATS*YSSLAKQPRERRTNYWRTPQTSKCSR*PSPQA
Subject   3827  HHHSLRYQRRIHHCHLQEPYHAESQMDPHLRHSRSPGNT*ASRHRHSSPQLVEHKQVEVWYR*ANPL*PKKRLA**AVATS*YSSLAKQPRERRTNYWRTPQTSKCSR*PSPQA  4168

Range 2: 3829 to 4119 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
242.1 bits(522) 0.0 97/97(100%) 0/97(0%) Minus/Plus
Query       50  LGARASANTWKFGGFSNNWCAVPEVVWRGRSISSLLLPITLGASLVIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTRHDTVP  340
                LGARASANTWKFGGFSNNWCAVPEVVWRGRSISSLLLPITLGASLVIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTRHDTVP
Subject   3829  LGARASANTWKFGGFSNNWCAVPEVVWRGRSISSLLLPITLGASLVIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTRHDTVP  4119

Range 3: 3828 to 4130 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
236.1 bits(509) 0.0 100/101(99%) 0/101(0%) Minus/Plus
Query       39  AWGEG*REHLEVWGVLQ*LVRRSRGCLAREEYQLVATAYYARRFFGHKGFA*RYHTSTCLCSTS*GEECL**DA*VLPGLRL*RRCGSIWDSA*YGSWR*Q  341
                AWGEG*REHLEVWGVLQ*LVRRSRGCLAREEYQLVATAYYARRFFGHKGFA*RYHTSTCLCSTS*GEECL* DA*VLPGLRL*RRCGSIWDSA*YGSWR*Q
Subject   3828  AWGEG*REHLEVWGVLQ*LVRRSRGCLAREEYQLVATAYYARRFFGHKGFA*RYHTSTCLCSTS*GEECL*RDA*VLPGLRL*RRCGSIWDSA*YGSWR*Q  4130

Range 4: 3827 to 4168 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
233.8 bits(504) 0.0 113/114(99%) 0/114(0%) Minus/Plus
Query        1  CLGRGLARTLGSLGGSPIIGAPFPRLFGEGGVSXXXXXXXXXXXLWS*GVCLTIPYLNLLMFHQLRGGMSMMRRLGITGTSTMTKVRVHLGLGMIRFLEMTVMDPPLVSQAMMV  342
                CLGRGLARTLGSLGGSPIIGAPFPRLFGEGGVSARCYCLLR*ALLWS*GVCLTIPYLNLLMFHQLRGGMSM RRLGITGTSTMTKVRVHLGLGMIRFLEMTVMDPPLVSQAMMV
Subject   3827  CLGRGLARTLGSLGGSPIIGAPFPRLFGEGGVSARCYCLLR*ALLWS*GVCLTIPYLNLLMFHQLRGGMSMTRRLGITGTSTMTKVRVHLGLGMIRFLEMTVMDPPLVSQAMMV  4168

Range 5: 3964 to 4167 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
165.6 bits(355) 0.0 67/68(99%) 0/68(0%) Plus/Minus
Query        2  TIIA*DTRGGSITVISRNRIMPSPRWTRTFVIVEVPVIPKRLIIDIPPLNWWNISKLRYGIVKQTPYD  205
                TIIA*DTRGGSITVISRNRIMPSPRWTRTFVIVEVPVIPKRL+IDIPPLNWWNISKLRYGIVKQTPYD
Subject   3964  TIIA*DTRGGSITVISRNRIMPSPRWTRTFVIVEVPVIPKRLVIDIPPLNWWNISKLRYGIVKQTPYD  4167

Range 6: 3829 to 3924 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.1 bits(175) 0.0 32/32(100%) 0/32(0%) Plus/Minus
Query      245  DTPPSPNNLGNGAPIIGEPPKLPSVRASPRPK  340
                DTPPSPNNLGNGAPIIGEPPKLPSVRASPRPK
Subject   3829  DTPPSPNNLGNGAPIIGEPPKLPSVRASPRPK  3924

Range 7: 3828 to 4034 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
156.4 bits(335) 0.0 69/69(100%) 0/69(0%) Plus/Minus
Query      135  TFLPSTGGT*AS*GMVSLSKPLMTKEAPSVIGSSNELILLPRQTTSGTAHQLLENPPNFQVFALALAPS  341
                TFLPSTGGT*AS*GMVSLSKPLMTKEAPSVIGSSNELILLPRQTTSGTAHQLLENPPNFQVFALALAPS
Subject   3828  TFLPSTGGT*AS*GMVSLSKPLMTKEAPSVIGSSNELILLPRQTTSGTAHQLLENPPNFQVFALALAPS  4034

Range 8: 4080 to 4166 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.5 bits(152) 0.0 29/29(100%) 0/29(0%) Plus/Minus
Query        3  PS*LEIPEEDPSLSSPGTVSCRVPDGPAP  89
                PS*LEIPEEDPSLSSPGTVSCRVPDGPAP
Subject   4080  PS*LEIPEEDPSLSSPGTVSCRVPDGPAP  4166

Grapevine leafroll associated virus 3 isolate 623, complete genome

Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 8

Range 1: 4309 to 4650 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
273.2 bits(590) 0.0 112/114(98%) 0/114(0%) Plus/Minus
Query        1  HHHSLRYQRRIHHCHLQEPYHAESQMDPHLRHSRSPGNT*ASHHRHSSPQLVEHKQVEVWYR*ANPL*PKKRLA**AVATS*YSSLAKQPRERRTNYWRTPQTSKCSR*PSPQA  342
                HHHSLRYQRRIHHCHLQEPYHAESQMDPHLRHSRSPGNT*AS HRHSSPQLVEHKQVEVWYR*ANPL*PKKRLA**AVATS*YSSLAKQPRERRTNYWRTPQTSKCS *PSPQA
Subject   4309  HHHSLRYQRRIHHCHLQEPYHAESQMDPHLRHSRSPGNT*ASRHRHSSPQLVEHKQVEVWYR*ANPL*PKKRLA**AVATS*YSSLAKQPRERRTNYWRTPQTSKCSH*PSPQA  4650

Range 2: 4311 to 4601 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
242.1 bits(522) 0.0 97/97(100%) 0/97(0%) Minus/Plus
Query       50  LGARASANTWKFGGFSNNWCAVPEVVWRGRSISSLLLPITLGASLVIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTRHDTVP  340
                LGARASANTWKFGGFSNNWCAVPEVVWRGRSISSLLLPITLGASLVIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTRHDTVP
Subject   4311  LGARASANTWKFGGFSNNWCAVPEVVWRGRSISSLLLPITLGASLVIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTRHDTVP  4601

Range 3: 4310 to 4612 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
232.5 bits(501) 0.0 99/101(98%) 0/101(0%) Minus/Plus
Query       39  AWGEG*REHLEVWGVLQ*LVRRSRGCLAREEYQLVATAYYARRFFGHKGFA*RYHTSTCLCSTS*GEECL**DA*VLPGLRL*RRCGSIWDSA*YGSWR*Q  341
                AWGEG* EHLEVWGVLQ*LVRRSRGCLAREEYQLVATAYYARRFFGHKGFA*RYHTSTCLCSTS*GEECL* DA*VLPGLRL*RRCGSIWDSA*YGSWR*Q
Subject   4310  AWGEG*CEHLEVWGVLQ*LVRRSRGCLAREEYQLVATAYYARRFFGHKGFA*RYHTSTCLCSTS*GEECL*RDA*VLPGLRL*RRCGSIWDSA*YGSWR*Q  4612

Range 4: 4309 to 4650 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
232.0 bits(500) 0.0 112/114(98%) 0/114(0%) Minus/Plus
Query        1  CLGRGLARTLGSLGGSPIIGAPFPRLFGEGGVSXXXXXXXXXXXLWS*GVCLTIPYLNLLMFHQLRGGMSMMRRLGITGTSTMTKVRVHLGLGMIRFLEMTVMDPPLVSQAMMV  342
                CLGRGL RTLGSLGGSPIIGAPFPRLFGEGGVSARCYCLLR*ALLWS*GVCLTIPYLNLLMFHQLRGGMSM RRLGITGTSTMTKVRVHLGLGMIRFLEMTVMDPPLVSQAMMV
Subject   4309  CLGRGLVRTLGSLGGSPIIGAPFPRLFGEGGVSARCYCLLR*ALLWS*GVCLTIPYLNLLMFHQLRGGMSMTRRLGITGTSTMTKVRVHLGLGMIRFLEMTVMDPPLVSQAMMV  4650

Range 5: 4446 to 4649 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
165.6 bits(355) 0.0 67/68(99%) 0/68(0%) Plus/Minus
Query        2  TIIA*DTRGGSITVISRNRIMPSPRWTRTFVIVEVPVIPKRLIIDIPPLNWWNISKLRYGIVKQTPYD  205
                TIIA*DTRGGSITVISRNRIMPSPRWTRTFVIVEVPVIPKRL+IDIPPLNWWNISKLRYGIVKQTPYD
Subject   4446  TIIA*DTRGGSITVISRNRIMPSPRWTRTFVIVEVPVIPKRLVIDIPPLNWWNISKLRYGIVKQTPYD  4649

Range 6: 4311 to 4406 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
81.3 bits(171) 0.0 31/32(97%) 0/32(0%) Plus/Minus
Query      245  DTPPSPNNLGNGAPIIGEPPKLPSVRASPRPK  340
                DTPPSPNNLGNGAPIIGEPPKLPSVR SPRPK
Subject   4311  DTPPSPNNLGNGAPIIGEPPKLPSVRTSPRPK  4406

Range 7: 4310 to 4516 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
156.4 bits(335) 0.0 69/69(100%) 0/69(0%) Plus/Minus
Query      135  TFLPSTGGT*AS*GMVSLSKPLMTKEAPSVIGSSNELILLPRQTTSGTAHQLLENPPNFQVFALALAPS  341
                TFLPSTGGT*AS*GMVSLSKPLMTKEAPSVIGSSNELILLPRQTTSGTAHQLLENPPNFQVFALALAPS
Subject   4310  TFLPSTGGT*AS*GMVSLSKPLMTKEAPSVIGSSNELILLPRQTTSGTAHQLLENPPNFQVFALALAPS  4516

Range 8: 4562 to 4648 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.5 bits(152) 0.0 29/29(100%) 0/29(0%) Plus/Minus
Query        3  PS*LEIPEEDPSLSSPGTVSCRVPDGPAP  89
                PS*LEIPEEDPSLSSPGTVSCRVPDGPAP
Subject   4562  PS*LEIPEEDPSLSSPGTVSCRVPDGPAP  4648

Grapevine leafroll associated virus 3 isolate GP18, complete genome

Sequence ID: EU259806.1 Length: 18498 Number of Matches: 8

Range 1: 4309 to 4650 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
273.2 bits(590) 0.0 112/114(98%) 0/114(0%) Plus/Minus
Query        1  HHHSLRYQRRIHHCHLQEPYHAESQMDPHLRHSRSPGNT*ASHHRHSSPQLVEHKQVEVWYR*ANPL*PKKRLA**AVATS*YSSLAKQPRERRTNYWRTPQTSKCSR*PSPQA  342
                HHHSLRYQRR HHCHLQEPYHAESQMDPHLRHSRSPGNT*AS HRHSSPQLVEHKQVEVWYR*ANPL*PKKRLA**AVATS*YSSLAKQPRERRTNYWRTPQTSKCSR*PSPQA
Subject   4309  HHHSLRYQRRTHHCHLQEPYHAESQMDPHLRHSRSPGNT*ASRHRHSSPQLVEHKQVEVWYR*ANPL*PKKRLA**AVATS*YSSLAKQPRERRTNYWRTPQTSKCSR*PSPQA  4650

Range 2: 4311 to 4601 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
242.1 bits(522) 0.0 97/97(100%) 0/97(0%) Minus/Plus
Query       50  LGARASANTWKFGGFSNNWCAVPEVVWRGRSISSLLLPITLGASLVIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTRHDTVP  340
                LGARASANTWKFGGFSNNWCAVPEVVWRGRSISSLLLPITLGASLVIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTRHDTVP
Subject   4311  LGARASANTWKFGGFSNNWCAVPEVVWRGRSISSLLLPITLGASLVIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTRHDTVP  4601

Range 3: 4310 to 4612 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
236.1 bits(509) 0.0 100/101(99%) 0/101(0%) Minus/Plus
Query       39  AWGEG*REHLEVWGVLQ*LVRRSRGCLAREEYQLVATAYYARRFFGHKGFA*RYHTSTCLCSTS*GEECL**DA*VLPGLRL*RRCGSIWDSA*YGSWR*Q  341
                AWGEG*REHLEVWGVLQ*LVRRSRGCLAREEYQLVATAYYARRFFGHKGFA*RYHTSTCLCSTS*GEECL* DA*VLPGLRL*RRCGSIWDSA*YGSWR*Q
Subject   4310  AWGEG*REHLEVWGVLQ*LVRRSRGCLAREEYQLVATAYYARRFFGHKGFA*RYHTSTCLCSTS*GEECL*RDA*VLPGLRL*RRCGSIWDSA*YGSWR*Q  4612

Range 4: 4309 to 4650 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
230.6 bits(497) 0.0 112/114(98%) 0/114(0%) Minus/Plus
Query        1  CLGRGLARTLGSLGGSPIIGAPFPRLFGEGGVSXXXXXXXXXXXLWS*GVCLTIPYLNLLMFHQLRGGMSMMRRLGITGTSTMTKVRVHLGLGMIRFLEMTVMDPPLVSQAMMV  342
                CLGRGLARTLGSLGGSPIIGAPFPRLFGEGGVSARCYCLLR*ALLWS*GVCLTIPYLNLLMFHQLRGGMSM RRLGITGTSTMTKVRVHLGLGMIRFLEMTVM PPLVSQAMMV
Subject   4309  CLGRGLARTLGSLGGSPIIGAPFPRLFGEGGVSARCYCLLR*ALLWS*GVCLTIPYLNLLMFHQLRGGMSMTRRLGITGTSTMTKVRVHLGLGMIRFLEMTVMGPPLVSQAMMV  4650

Range 5: 4446 to 4649 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
163.3 bits(350) 0.0 66/68(97%) 0/68(0%) Plus/Minus
Query        2  TIIA*DTRGGSITVISRNRIMPSPRWTRTFVIVEVPVIPKRLIIDIPPLNWWNISKLRYGIVKQTPYD  205
                TIIA*DTRGG ITVISRNRIMPSPRWTRTFVIVEVPVIPKRL+IDIPPLNWWNISKLRYGIVKQTPYD
Subject   4446  TIIA*DTRGGPITVISRNRIMPSPRWTRTFVIVEVPVIPKRLVIDIPPLNWWNISKLRYGIVKQTPYD  4649

Range 6: 4311 to 4406 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.1 bits(175) 0.0 32/32(100%) 0/32(0%) Plus/Minus
Query      245  DTPPSPNNLGNGAPIIGEPPKLPSVRASPRPK  340
                DTPPSPNNLGNGAPIIGEPPKLPSVRASPRPK
Subject   4311  DTPPSPNNLGNGAPIIGEPPKLPSVRASPRPK  4406

Range 7: 4310 to 4516 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
156.4 bits(335) 0.0 69/69(100%) 0/69(0%) Plus/Minus
Query      135  TFLPSTGGT*AS*GMVSLSKPLMTKEAPSVIGSSNELILLPRQTTSGTAHQLLENPPNFQVFALALAPS  341
                TFLPSTGGT*AS*GMVSLSKPLMTKEAPSVIGSSNELILLPRQTTSGTAHQLLENPPNFQVFALALAPS
Subject   4310  TFLPSTGGT*AS*GMVSLSKPLMTKEAPSVIGSSNELILLPRQTTSGTAHQLLENPPNFQVFALALAPS  4516

Range 8: 4562 to 4648 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.5 bits(152) 0.0 29/29(100%) 0/29(0%) Plus/Minus
Query        3  PS*LEIPEEDPSLSSPGTVSCRVPDGPAP  89
                PS*LEIPEEDPSLSSPGTVSCRVPDGPAP
Subject   4562  PS*LEIPEEDPSLSSPGTVSCRVPDGPAP  4648

Grapevine leafroll associated virus 3 isolate TC BR, complete genome

Sequence ID: KX756668.1 Length: 18498 Number of Matches: 8

Range 1: 4309 to 4650 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
273.2 bits(590) 0.0 112/114(98%) 0/114(0%) Plus/Minus
Query        1  HHHSLRYQRRIHHCHLQEPYHAESQMDPHLRHSRSPGNT*ASHHRHSSPQLVEHKQVEVWYR*ANPL*PKKRLA**AVATS*YSSLAKQPRERRTNYWRTPQTSKCSR*PSPQA  342
                HHHSLRYQRRIHHCHLQEPYHAESQMDPHLRHSRSPG+T*AS HRHSSPQLVEHKQVEVWYR*ANPL*PKKRLA**AVATS*YSSLAKQPRERRTNYWRTPQTSKCSR*PSPQA
Subject   4309  HHHSLRYQRRIHHCHLQEPYHAESQMDPHLRHSRSPGST*ASRHRHSSPQLVEHKQVEVWYR*ANPL*PKKRLA**AVATS*YSSLAKQPRERRTNYWRTPQTSKCSR*PSPQA  4650

Range 2: 4311 to 4601 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
242.1 bits(522) 0.0 97/97(100%) 0/97(0%) Minus/Plus
Query       50  LGARASANTWKFGGFSNNWCAVPEVVWRGRSISSLLLPITLGASLVIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTRHDTVP  340
                LGARASANTWKFGGFSNNWCAVPEVVWRGRSISSLLLPITLGASLVIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTRHDTVP
Subject   4311  LGARASANTWKFGGFSNNWCAVPEVVWRGRSISSLLLPITLGASLVIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTRHDTVP  4601

Range 3: 4310 to 4612 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
236.1 bits(509) 0.0 100/101(99%) 0/101(0%) Minus/Plus
Query       39  AWGEG*REHLEVWGVLQ*LVRRSRGCLAREEYQLVATAYYARRFFGHKGFA*RYHTSTCLCSTS*GEECL**DA*VLPGLRL*RRCGSIWDSA*YGSWR*Q  341
                AWGEG*REHLEVWGVLQ*LVRRSRGCLAREEYQLVATAYYARRFFGHKGFA*RYHTSTCLCSTS*GEECL* DA*VLPGLRL*RRCGSIWDSA*YGSWR*Q
Subject   4310  AWGEG*REHLEVWGVLQ*LVRRSRGCLAREEYQLVATAYYARRFFGHKGFA*RYHTSTCLCSTS*GEECL*RDA*VLPGLRL*RRCGSIWDSA*YGSWR*Q  4612

Range 4: 4309 to 4650 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
231.5 bits(499) 0.0 112/114(98%) 0/114(0%) Minus/Plus
Query        1  CLGRGLARTLGSLGGSPIIGAPFPRLFGEGGVSXXXXXXXXXXXLWS*GVCLTIPYLNLLMFHQLRGGMSMMRRLGITGTSTMTKVRVHLGLGMIRFLEMTVMDPPLVSQAMMV  342
                CLGRGLARTLGSLGGSPIIGAPFPRLFGEGGVSARCYCLLR*ALLWS*GVCLTIPYLNLLMFHQLRGGMSM RRLG TGTSTMTKVRVHLGLGMIRFLEMTVMDPPLVSQAMMV
Subject   4309  CLGRGLARTLGSLGGSPIIGAPFPRLFGEGGVSARCYCLLR*ALLWS*GVCLTIPYLNLLMFHQLRGGMSMTRRLGTTGTSTMTKVRVHLGLGMIRFLEMTVMDPPLVSQAMMV  4650

Range 5: 4446 to 4649 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
165.1 bits(354) 0.0 66/68(97%) 0/68(0%) Plus/Minus
Query        2  TIIA*DTRGGSITVISRNRIMPSPRWTRTFVIVEVPVIPKRLIIDIPPLNWWNISKLRYGIVKQTPYD  205
                TIIA*DTRGGSITVISRNRIMPSPRWTRTFVIVEVPV+PKRL+IDIPPLNWWNISKLRYGIVKQTPYD
Subject   4446  TIIA*DTRGGSITVISRNRIMPSPRWTRTFVIVEVPVVPKRLVIDIPPLNWWNISKLRYGIVKQTPYD  4649

Range 6: 4311 to 4406 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.1 bits(175) 0.0 32/32(100%) 0/32(0%) Plus/Minus
Query      245  DTPPSPNNLGNGAPIIGEPPKLPSVRASPRPK  340
                DTPPSPNNLGNGAPIIGEPPKLPSVRASPRPK
Subject   4311  DTPPSPNNLGNGAPIIGEPPKLPSVRASPRPK  4406

Range 7: 4310 to 4516 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
156.4 bits(335) 0.0 69/69(100%) 0/69(0%) Plus/Minus
Query      135  TFLPSTGGT*AS*GMVSLSKPLMTKEAPSVIGSSNELILLPRQTTSGTAHQLLENPPNFQVFALALAPS  341
                TFLPSTGGT*AS*GMVSLSKPLMTKEAPSVIGSSNELILLPRQTTSGTAHQLLENPPNFQVFALALAPS
Subject   4310  TFLPSTGGT*AS*GMVSLSKPLMTKEAPSVIGSSNELILLPRQTTSGTAHQLLENPPNFQVFALALAPS  4516

Range 8: 4562 to 4648 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.5 bits(152) 0.0 29/29(100%) 0/29(0%) Plus/Minus
Query        3  PS*LEIPEEDPSLSSPGTVSCRVPDGPAP  89
                PS*LEIPEEDPSLSSPGTVSCRVPDGPAP
Subject   4562  PS*LEIPEEDPSLSSPGTVSCRVPDGPAP  4648

Nucleotide Sequence (409 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
41
82
123
164
205
246
287
328
369
409

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
296.6 1576.4 27% 1.068e-78 88% JX559645.1
296.6 1576.4 27% 1.068e-78 88% GQ352631.1
296.6 1582.3 27% 1.068e-78 88% GU983863.1
296.6 1590.6 27% 1.068e-78 89% EU344893.1
296.6 1590.6 27% 1.068e-78 89% KX756669.1

Alignments

Grapevine leafroll associated virus 3 isolate 3138 07, complete genome

Sequence ID: JX559645.1 Length: 18498 Number of Matches: 7

Range 1: 5679 to 6071 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
296.6 bits(641) 0.0 122/131(93%) 0/131(0%) Minus/Plus
Query        1  RKGGKVMVMNVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQRAQSQGVTRSITVRSGGKALSEGSGWEVKGRSTYSIWCEQDYVKKCEWLRADNPVMAL  393
                RKGGKVMV+NVASGDYFLMPCGFQRTHLHSV+SIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQ+ QSQG TR+IT +SGGKALSEGSG EVKGRSTYSIWCEQDYVKKCEWLRADNPVMAL
Subject   5679  RKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMAL  6071

Range 2: 5675 to 6070 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
288.4 bits(623) 0.0 120/132(91%) 0/132(0%) Plus/Minus
Query        2  RAITGLSALSHSHFLT*SCSHHIEYVDLPLTSQPLPSDRALPPDLTVIDLVTP*LCARWFGTPGDFSSDTPPANCNILPTPNTRRVALNVKLIRPSSIELTECKCVL*KPQGIRK*SPEATFMTMTFPPFLH  397
                RAITGLSALSHSHFLT*SCSHHIEYVDLPLTS PLPSDRALPPD  VI LV P LC  WFGTPGDFSSDTPPANCNILPTP TRRVALNVKL+RPSSIE TECKCVL*KPQGIRK*SPEATFMTMT PPFLH
Subject   5675  RAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLH  6070

Range 3: 5680 to 6069 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
261.8 bits(565) 0.0 117/130(90%) 0/130(0%) Minus/Plus
Query        3  GRVGRSWS*T*LRVTIFLCLAVFKGRTCIQ*ALSTKGVSV*RSGQLGACLV*AGCCS*PAACRMRNRQVFQTSVHRVKVLPDQSL*DRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WL  392
                GRV RSWS*T*LRVTIFLCLAVFKGRTCIQ* LSTKG SV*RSGQLGA LV*AGCCS*PAACRMR+ QVFQTS HR KVLP+QS  ++GARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WL
Subject   5680  GRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRSHQVFQTSNHRAKVLPEQSHQNQGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WL  6069

Range 4: 5706 to 6071 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
255.8 bits(552) 0.0 107/122(88%) 0/122(0%) Plus/Minus
Query        1  KSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRSYSD*SGNTLTLCTLVWNTWRFLIRHAAG*LQHPAYTKHAPSCPERQTDTPFVDRAH*MQVRPLKTARHKKIVTRSYV  366
                KSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAP  + D SG+TL L  LVWNTW  LIRHAAG*LQHPAYTK APSCPERQTD PFVDR +*MQVRPLKTARHKKIVTRSYV
Subject   5706  KSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAP*FWCDCSGSTLALWLLVWNTW*LLIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYV  6071

Range 5: 5708 to 6070 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
249.4 bits(538) 0.0 110/121(91%) 0/121(0%) Minus/Plus
Query        2  RSFG*LFSYALRFSKDALAFSELYRRRAYQFDVQGNSARVWCRQDVAVSRRRVG*EIARCSKPACTESRCYQINHCKIGGQGSI*GKWLGSQGEVDILDMVRTRLR*EV*VAQG**SSDGS  364
                RSFG*LFSYALRFSKDALAFS+LYRRRA+QFDVQGNSAR+WCRQDVAVSRRRVG*E+ RCSKPA TE RCYQ NH KI GQGSI*GKW GSQGEVDILDMVRTRLR*EV*VAQG**SSDGS
Subject   5708  RSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EVTRCSKPATTEPRCYQNNHTKIRGQGSI*GKW*GSQGEVDILDMVRTRLR*EV*VAQG**SSDGS  6070

Range 6: 5794 to 6069 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
186.6 bits(401) 0.0 83/92(90%) 0/92(0%) Plus/Minus
Query        3  EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPNHFPQIEPCPPILQ*LIW*HLDSVHAGLEHLAISHPTRRRLTATSCLHQTRAELP*TSN*  278
                EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LP HFPQIEPCP IL *L W*HL SV AGLEHL  SHPTRRRLTATSCLHQ RAELP*TSN*
Subject   5794  EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPLILV*LFW*HLGSVVAGLEHLVTSHPTRRRLTATSCLHQRRAELP*TSN*  6069

Range 7: 5707 to 5751 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.7 bits(76) 0.0 15/15(100%) 0/15(0%) Plus/Minus
Query      321  FENRKA*ENSHPKLR  365
                FENRKA*ENSHPKLR
Subject   5707  FENRKA*ENSHPKLR  5751

Grapevine leafroll associated virus 3 isolate 621, complete genome

Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 7

Range 1: 5679 to 6071 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
296.6 bits(641) 0.0 122/131(93%) 0/131(0%) Minus/Plus
Query        1  RKGGKVMVMNVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQRAQSQGVTRSITVRSGGKALSEGSGWEVKGRSTYSIWCEQDYVKKCEWLRADNPVMAL  393
                RKGGKVMV+NVASGDYFLMPCGFQRTHLHSV+SIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQ+ QSQG TR+IT +SGGKALSEGSG EVKGRSTYSIWCEQDYVKKCEWLRADNPVMAL
Subject   5679  RKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMAL  6071

Range 2: 5675 to 6070 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
288.4 bits(623) 0.0 120/132(91%) 0/132(0%) Plus/Minus
Query        2  RAITGLSALSHSHFLT*SCSHHIEYVDLPLTSQPLPSDRALPPDLTVIDLVTP*LCARWFGTPGDFSSDTPPANCNILPTPNTRRVALNVKLIRPSSIELTECKCVL*KPQGIRK*SPEATFMTMTFPPFLH  397
                RAITGLSALSHSHFLT*SCSHHIEYVDLPLTS PLPSDRALPPD  VI LV P LC  WFGTPGDFSSDTPPANCNILPTP TRRVALNVKL+RPSSIE TECKCVL*KPQGIRK*SPEATFMTMT PPFLH
Subject   5675  RAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLH  6070

Range 3: 5680 to 6069 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
261.8 bits(565) 0.0 117/130(90%) 0/130(0%) Minus/Plus
Query        3  GRVGRSWS*T*LRVTIFLCLAVFKGRTCIQ*ALSTKGVSV*RSGQLGACLV*AGCCS*PAACRMRNRQVFQTSVHRVKVLPDQSL*DRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WL  392
                GRV RSWS*T*LRVTIFLCLAVFKGRTCIQ* LSTKG SV*RSGQLGA LV*AGCCS*PAACRMR+ QVFQTS HR KVLP+QS  ++GARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WL
Subject   5680  GRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRSHQVFQTSNHRAKVLPEQSHQNQGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WL  6069

Range 4: 5706 to 6071 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
255.8 bits(552) 0.0 107/122(88%) 0/122(0%) Plus/Minus
Query        1  KSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRSYSD*SGNTLTLCTLVWNTWRFLIRHAAG*LQHPAYTKHAPSCPERQTDTPFVDRAH*MQVRPLKTARHKKIVTRSYV  366
                KSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAP  + D SG+TL L  LVWNTW  LIRHAAG*LQHPAYTK APSCPERQTD PFVDR +*MQVRPLKTARHKKIVTRSYV
Subject   5706  KSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAP*FWCDCSGSTLALWLLVWNTW*LLIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYV  6071

Range 5: 5708 to 6070 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
249.4 bits(538) 0.0 110/121(91%) 0/121(0%) Minus/Plus
Query        2  RSFG*LFSYALRFSKDALAFSELYRRRAYQFDVQGNSARVWCRQDVAVSRRRVG*EIARCSKPACTESRCYQINHCKIGGQGSI*GKWLGSQGEVDILDMVRTRLR*EV*VAQG**SSDGS  364
                RSFG*LFSYALRFSKDALAFS+LYRRRA+QFDVQGNSAR+WCRQDVAVSRRRVG*E+ RCSKPA TE RCYQ NH KI GQGSI*GKW GSQGEVDILDMVRTRLR*EV*VAQG**SSDGS
Subject   5708  RSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EVTRCSKPATTEPRCYQNNHTKIRGQGSI*GKW*GSQGEVDILDMVRTRLR*EV*VAQG**SSDGS  6070

Range 6: 5794 to 6069 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
186.6 bits(401) 0.0 83/92(90%) 0/92(0%) Plus/Minus
Query        3  EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPNHFPQIEPCPPILQ*LIW*HLDSVHAGLEHLAISHPTRRRLTATSCLHQTRAELP*TSN*  278
                EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LP HFPQIEPCP IL *L W*HL SV AGLEHL  SHPTRRRLTATSCLHQ RAELP*TSN*
Subject   5794  EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPLILV*LFW*HLGSVVAGLEHLVTSHPTRRRLTATSCLHQRRAELP*TSN*  6069

Range 7: 5707 to 5751 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.7 bits(76) 0.0 15/15(100%) 0/15(0%) Plus/Minus
Query      321  FENRKA*ENSHPKLR  365
                FENRKA*ENSHPKLR
Subject   5707  FENRKA*ENSHPKLR  5751

Grapevine leafroll associated virus 3 isolate WA MR, complete genome

Sequence ID: GU983863.1 Length: 18498 Number of Matches: 7

Range 1: 5679 to 6071 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
296.6 bits(641) 0.0 122/131(93%) 0/131(0%) Minus/Plus
Query        1  RKGGKVMVMNVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQRAQSQGVTRSITVRSGGKALSEGSGWEVKGRSTYSIWCEQDYVKKCEWLRADNPVMAL  393
                RKGGKVMV+NVASGDYFLMPCGFQRTHLHSV+SIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQ+ QSQG TR+IT +SGGKALSEGSG EVKGRSTYSIWCEQDYVKKCEWLRADNPVMAL
Subject   5679  RKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGKEVKGRSTYSIWCEQDYVKKCEWLRADNPVMAL  6071

Range 2: 5675 to 6070 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
288.4 bits(623) 0.0 120/132(91%) 0/132(0%) Plus/Minus
Query        2  RAITGLSALSHSHFLT*SCSHHIEYVDLPLTSQPLPSDRALPPDLTVIDLVTP*LCARWFGTPGDFSSDTPPANCNILPTPNTRRVALNVKLIRPSSIELTECKCVL*KPQGIRK*SPEATFMTMTFPPFLH  397
                RAITGLSALSHSHFLT*SCSHHIEYVDLPLTS PLPSDRALPPD  VI LV P LC  WFGTPGDFSSDTPPANCNILPTP TRRVALNVKL+RPSSIE TECKCVL*KPQGIRK*SPEATFMTMT PPFLH
Subject   5675  RAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLH  6070

Range 3: 5680 to 6069 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
260.0 bits(561) 0.0 117/130(90%) 0/130(0%) Minus/Plus
Query        3  GRVGRSWS*T*LRVTIFLCLAVFKGRTCIQ*ALSTKGVSV*RSGQLGACLV*AGCCS*PAACRMRNRQVFQTSVHRVKVLPDQSL*DRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WL  392
                GRV RSWS*T*LRVTIFLCLAVFKGRTCIQ* LSTKG SV*RSGQLGA LV*AGCCS*PAACRMR+ QVFQTS HR KVLP+QS  +RGARLYLREVV KSRGGRHTRYGANKITLRSVSGSGLIIQ*WL
Subject   5680  GRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRSHQVFQTSNHRAKVLPEQSHQNRGARLYLREVVRKSRGGRHTRYGANKITLRSVSGSGLIIQ*WL  6069

Range 4: 5706 to 6071 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
255.4 bits(551) 0.0 107/122(88%) 0/122(0%) Plus/Minus
Query        1  KSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRSYSD*SGNTLTLCTLVWNTWRFLIRHAAG*LQHPAYTKHAPSCPERQTDTPFVDRAH*MQVRPLKTARHKKIVTRSYV  366
                KSHHWIISPEPLTLLNVILFAPYRVCRPPLDF TTSLR*SLAPR + D SG+TL L  LVWNTW  LIRHAAG*LQHPAYTK APSCPERQTD PFVDR +*MQVRPLKTARHKKIVTRSYV
Subject   5706  KSHHWIISPEPLTLLNVILFAPYRVCRPPLDFLTTSLR*SLAPRFWCDCSGSTLALWLLVWNTW*LLIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYV  6071

Range 5: 5708 to 6070 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
253.1 bits(546) 0.0 111/121(92%) 0/121(0%) Minus/Plus
Query        2  RSFG*LFSYALRFSKDALAFSELYRRRAYQFDVQGNSARVWCRQDVAVSRRRVG*EIARCSKPACTESRCYQINHCKIGGQGSI*GKWLGSQGEVDILDMVRTRLR*EV*VAQG**SSDGS  364
                RSFG*LFSYALRFSKDALAFS+LYRRRA+QFDVQGNSAR+WCRQDVAVSRRRVG*E+ RCSKPA TE RCYQ NH KIGGQGSI*GKW GSQGEVDILDMVRTRLR*EV*VAQG**SSDGS
Subject   5708  RSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EVTRCSKPATTEPRCYQNNHTKIGGQGSI*GKW*GSQGEVDILDMVRTRLR*EV*VAQG**SSDGS  6070

Range 6: 5794 to 6069 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
191.2 bits(411) 0.0 84/92(91%) 0/92(0%) Plus/Minus
Query        3  EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPNHFPQIEPCPPILQ*LIW*HLDSVHAGLEHLAISHPTRRRLTATSCLHQTRAELP*TSN*  278
                EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LP HFPQIEPCPPIL *L W*HL SV AGLEHL  SHPTRRRLTATSCLHQ RAELP*TSN*
Subject   5794  EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLVTSHPTRRRLTATSCLHQRRAELP*TSN*  6069

Range 7: 5707 to 5751 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.7 bits(76) 0.0 15/15(100%) 0/15(0%) Plus/Minus
Query      321  FENRKA*ENSHPKLR  365
                FENRKA*ENSHPKLR
Subject   5707  FENRKA*ENSHPKLR  5751

Grapevine leafroll associated virus 3 isolate Cl 766, complete genome

Sequence ID: EU344893.1 Length: 17919 Number of Matches: 7

Range 1: 5100 to 5492 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
296.6 bits(641) 0.0 122/131(93%) 0/131(0%) Minus/Plus
Query        1  RKGGKVMVMNVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQRAQSQGVTRSITVRSGGKALSEGSGWEVKGRSTYSIWCEQDYVKKCEWLRADNPVMAL  393
                RKGGKVMV+NVASGDYFLMPCGFQRTHLHSV+SIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQ+ QSQG TR+IT +SGGKALSEGSG EVKGRSTYSIWCEQDYVKKCEWLRADNPVMAL
Subject   5100  RKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMAL  5492

Range 2: 5096 to 5491 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
288.4 bits(623) 0.0 120/132(91%) 0/132(0%) Plus/Minus
Query        2  RAITGLSALSHSHFLT*SCSHHIEYVDLPLTSQPLPSDRALPPDLTVIDLVTP*LCARWFGTPGDFSSDTPPANCNILPTPNTRRVALNVKLIRPSSIELTECKCVL*KPQGIRK*SPEATFMTMTFPPFLH  397
                RAITGLSALSHSHFLT*SCSHHIEYVDLPLTS PLPSDRALPPD  VI LV P LC  WFGTPGDFSSDTPPANCNILPTP TRRVALNVKL+RPSSIE TECKCVL*KPQGIRK*SPEATFMTMT PPFLH
Subject   5096  RAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLH  5491

Range 3: 5101 to 5490 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
263.6 bits(569) 0.0 118/130(91%) 0/130(0%) Minus/Plus
Query        3  GRVGRSWS*T*LRVTIFLCLAVFKGRTCIQ*ALSTKGVSV*RSGQLGACLV*AGCCS*PAACRMRNRQVFQTSVHRVKVLPDQSL*DRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WL  392
                GRV RSWS*T*LRVTIFLCLAVFKGRTCIQ* LSTKG SV*RSGQLGA LV*AGCCS*PAACRMR+ QVFQTS HR KVLP+QS  +RGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WL
Subject   5101  GRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRSHQVFQTSNHRAKVLPEQSHQNRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WL  5490

Range 4: 5127 to 5492 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
260.0 bits(561) 0.0 108/122(89%) 0/122(0%) Plus/Minus
Query        1  KSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRSYSD*SGNTLTLCTLVWNTWRFLIRHAAG*LQHPAYTKHAPSCPERQTDTPFVDRAH*MQVRPLKTARHKKIVTRSYV  366
                KSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPR + D SG+TL L  LVWNTW  LIRHAAG*LQHPAYTK APSCPERQTD PFVDR +*MQVRPLKTARHKKIVTRSYV
Subject   5127  KSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRFWCDCSGSTLALWLLVWNTW*LLIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYV  5492

Range 5: 5129 to 5491 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
253.1 bits(546) 0.0 111/121(92%) 0/121(0%) Minus/Plus
Query        2  RSFG*LFSYALRFSKDALAFSELYRRRAYQFDVQGNSARVWCRQDVAVSRRRVG*EIARCSKPACTESRCYQINHCKIGGQGSI*GKWLGSQGEVDILDMVRTRLR*EV*VAQG**SSDGS  364
                RSFG*LFSYALRFSKDALAFS+LYRRRA+QFDVQGNSAR+WCRQDVAVSRRRVG*E+ RCSKPA TE RCYQ NH KIGGQGSI*GKW GSQGEVDILDMVRTRLR*EV*VAQG**SSDGS
Subject   5129  RSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EVTRCSKPATTEPRCYQNNHTKIGGQGSI*GKW*GSQGEVDILDMVRTRLR*EV*VAQG**SSDGS  5491

Range 6: 5215 to 5490 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
191.2 bits(411) 0.0 84/92(91%) 0/92(0%) Plus/Minus
Query        3  EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPNHFPQIEPCPPILQ*LIW*HLDSVHAGLEHLAISHPTRRRLTATSCLHQTRAELP*TSN*  278
                EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LP HFPQIEPCPPIL *L W*HL SV AGLEHL  SHPTRRRLTATSCLHQ RAELP*TSN*
Subject   5215  EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLVTSHPTRRRLTATSCLHQRRAELP*TSN*  5490

Range 7: 5128 to 5172 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.7 bits(76) 0.0 15/15(100%) 0/15(0%) Plus/Minus
Query      321  FENRKA*ENSHPKLR  365
                FENRKA*ENSHPKLR
Subject   5128  FENRKA*ENSHPKLR  5172

Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome

Sequence ID: KX756669.1 Length: 18313 Number of Matches: 7

Range 1: 5494 to 5886 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
296.6 bits(641) 0.0 122/131(93%) 0/131(0%) Minus/Plus
Query        1  RKGGKVMVMNVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQRAQSQGVTRSITVRSGGKALSEGSGWEVKGRSTYSIWCEQDYVKKCEWLRADNPVMAL  393
                RKGGKVMV+NVASGDYFLMPCGFQRTHLHSV+SIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQ+ QSQG TR+IT +SGGKALSEGSG EVKGRSTYSIWCEQDYVKKCEWLRADNPVMAL
Subject   5494  RKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMAL  5886

Range 2: 5490 to 5885 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
288.4 bits(623) 0.0 120/132(91%) 0/132(0%) Plus/Minus
Query        2  RAITGLSALSHSHFLT*SCSHHIEYVDLPLTSQPLPSDRALPPDLTVIDLVTP*LCARWFGTPGDFSSDTPPANCNILPTPNTRRVALNVKLIRPSSIELTECKCVL*KPQGIRK*SPEATFMTMTFPPFLH  397
                RAITGLSALSHSHFLT*SCSHHIEYVDLPLTS PLPSDRALPPD  VI LV P LC  WFGTPGDFSSDTPPANCNILPTP TRRVALNVKL+RPSSIE TECKCVL*KPQGIRK*SPEATFMTMT PPFLH
Subject   5490  RAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLH  5885

Range 3: 5495 to 5884 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
263.6 bits(569) 0.0 118/130(91%) 0/130(0%) Minus/Plus
Query        3  GRVGRSWS*T*LRVTIFLCLAVFKGRTCIQ*ALSTKGVSV*RSGQLGACLV*AGCCS*PAACRMRNRQVFQTSVHRVKVLPDQSL*DRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WL  392
                GRV RSWS*T*LRVTIFLCLAVFKGRTCIQ* LSTKG SV*RSGQLGA LV*AGCCS*PAACRMR+ QVFQTS HR KVLP+QS  +RGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WL
Subject   5495  GRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRSHQVFQTSNHRAKVLPEQSHQNRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WL  5884

Range 4: 5521 to 5886 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
260.0 bits(561) 0.0 108/122(89%) 0/122(0%) Plus/Minus
Query        1  KSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRSYSD*SGNTLTLCTLVWNTWRFLIRHAAG*LQHPAYTKHAPSCPERQTDTPFVDRAH*MQVRPLKTARHKKIVTRSYV  366
                KSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPR + D SG+TL L  LVWNTW  LIRHAAG*LQHPAYTK APSCPERQTD PFVDR +*MQVRPLKTARHKKIVTRSYV
Subject   5521  KSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRFWCDCSGSTLALWLLVWNTW*LLIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYV  5886

Range 5: 5523 to 5885 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
253.1 bits(546) 0.0 111/121(92%) 0/121(0%) Minus/Plus
Query        2  RSFG*LFSYALRFSKDALAFSELYRRRAYQFDVQGNSARVWCRQDVAVSRRRVG*EIARCSKPACTESRCYQINHCKIGGQGSI*GKWLGSQGEVDILDMVRTRLR*EV*VAQG**SSDGS  364
                RSFG*LFSYALRFSKDALAFS+LYRRRA+QFDVQGNSAR+WCRQDVAVSRRRVG*E+ RCSKPA TE RCYQ NH KIGGQGSI*GKW GSQGEVDILDMVRTRLR*EV*VAQG**SSDGS
Subject   5523  RSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EVTRCSKPATTEPRCYQNNHTKIGGQGSI*GKW*GSQGEVDILDMVRTRLR*EV*VAQG**SSDGS  5885

Range 6: 5609 to 5884 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
191.2 bits(411) 0.0 84/92(91%) 0/92(0%) Plus/Minus
Query        3  EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPNHFPQIEPCPPILQ*LIW*HLDSVHAGLEHLAISHPTRRRLTATSCLHQTRAELP*TSN*  278
                EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LP HFPQIEPCPPIL *L W*HL SV AGLEHL  SHPTRRRLTATSCLHQ RAELP*TSN*
Subject   5609  EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLVTSHPTRRRLTATSCLHQRRAELP*TSN*  5884

Range 7: 5522 to 5566 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.7 bits(76) 0.0 15/15(100%) 0/15(0%) Plus/Minus
Query      321  FENRKA*ENSHPKLR  365
                FENRKA*ENSHPKLR
Subject   5522  FENRKA*ENSHPKLR  5566

Nucleotide Sequence (1792 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
180
360
540
720
900
1080
1260
1440
1620
1792

Descriptions

Alignments

Grapevine leafroll associated virus 3 isolate GH24, complete genome

Sequence ID: KM058745.1 Length: 18493 Number of Matches: 47

Range 1: 9113 to 9448 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
279.2 bits(603) 0.0 112/112(100%) 0/112(0%) Plus/Minus
Query      386  SPHLCTDESRKGTPKEKTLYCTSQAGINLTD*TKRKNTSTPRKERTTKRPSYKK**DENKKCHWYCPHRWHA*KRKLKPKTKEGSPLVLTSQMARLEDRNKGIHDL*YDKHP  721
                SPHLCTDESRKGTPKEKTLYCTSQAGINLTD*TKRKNTSTPRKERTTKRPSYKK**DENKKCHWYCPHRWHA*KRKLKPKTKEGSPLVLTSQMARLEDRNKGIHDL*YDKHP
Subject   9113  SPHLCTDESRKGTPKEKTLYCTSQAGINLTD*TKRKNTSTPRKERTTKRPSYKK**DENKKCHWYCPHRWHA*KRKLKPKTKEGSPLVLTSQMARLEDRNKGIHDL*YDKHP  9448

Range 2: 750 to 1115 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
278.3 bits(601) 0.0 121/122(99%) 0/122(0%) Plus/Minus
Query      724  RMRDRFKRNGLIRTIGNVRRV*PSH*LDFLAVRPNRHTIAAN*GELPSIAVNG*WGKYTLHPLGELTNINVSGALRRKIDYFSAAGRFKVNYELINVTISLIKPVKLQSGVNVRKGELTQNT  1089
                RMRDRFKRNGLIRTIGNVRRV*PSH*LDFLAVRPN HTIAAN*GELPSIAVNG*WGKYTLHPLGELTNINVSGALRRKIDYFSAAGRFKVNYELINVTISLIKPVKLQSGVNVRKGELTQNT
Subject    750  RMRDRFKRNGLIRTIGNVRRV*PSH*LDFLAVRPNCHTIAAN*GELPSIAVNG*WGKYTLHPLGELTNINVSGALRRKIDYFSAAGRFKVNYELINVTISLIKPVKLQSGVNVRKGELTQNT  1115

Range 3: 9490 to 9831 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
277.4 bits(599) 0.0 114/114(100%) 0/114(0%) Plus/Minus
Query        3  TPLYLQSPALSAPF*AGCWTPNRGYPRANAQMRSRNQHVRLTW*LRC*T*TLPSSPKDSLDSTAVHDLNKCSAN*HVHEPNPTLPAL*KSRLLATCWTLTYPDATRKVTTHGVL  344
                TPLYLQSPALSAPF*AGCWTPNRGYPRANAQMRSRNQHVRLTW*LRC*T*TLPSSPKDSLDSTAVHDLNKCSAN*HVHEPNPTLPAL*KSRLLATCWTLTYPDATRKVTTHGVL
Subject   9490  TPLYLQSPALSAPF*AGCWTPNRGYPRANAQMRSRNQHVRLTW*LRC*T*TLPSSPKDSLDSTAVHDLNKCSAN*HVHEPNPTLPAL*KSRLLATCWTLTYPDATRKVTTHGVL  9831

Range 4: 9335 to 9676 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
275.1 bits(594) 0.0 114/114(100%) 0/114(0%) Minus/Plus
Query      158  CIFSFSLVREVNTGLTCTVESFFFWGTLPTFVGA*MGRNFLLYLWDDWRYYDSTPCVVTFLVASG*VRVQQVANSLLF*SAGSVGFGSCTC*LAEHLFRSCTAVESSESLGDDG  499
                CIFSFSLVREVNTGLTCTVESFFFWGTLPTFVGA*MGRNFLLYLWDDWRYYDSTPCVVTFLVASG*VRVQQVANSLLF*SAGSVGFGSCTC*LAEHLFRSCTAVESSESLGDDG
Subject   9335  CIFSFSLVREVNTGLTCTVESFFFWGTLPTFVGA*MGRNFLLYLWDDWRYYDSTPCVVTFLVASG*VRVQQVANSLLF*SAGSVGFGSCTC*LAEHLFRSCTAVESSESLGDDG  9676

Range 5: 66 to 512 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
273.7 bits(591) 0.0 147/149(99%) 0/149(0%) Minus/Plus
Query     1302  VLCIFFLSIWVVFGFSYCLSYILKTKKYFLPVVFCLAVFIFPY*SEKQKIFLPLCGVASC*VFLQVSIVCFWVFIFRTYFRI*FS*L*A*RXXXXXXXXXXXXXXFPSSKCGKLPFSVFI*V*SXXXXXXXXLNSCLSFNFELVLVIYP  1748
                V C FFLSIWVVFGFSYCLSYILKTKKYFLPVVFCLAVFIFPY*SEKQKIFLPLCGVASC*VFLQVSIVCFWVFIFRTYFRI*FS*L*A*RVFYFCFFVFFVFPVFPSSKCGKLPFSVFI*V*SF*VFLLFKLNSCLSFNFELVLVIYP
Subject     66  VPCTFFLSIWVVFGFSYCLSYILKTKKYFLPVVFCLAVFIFPY*SEKQKIFLPLCGVASC*VFLQVSIVCFWVFIFRTYFRI*FS*L*A*RVFYFCFFVFFVFPVFPSSKCGKLPFSVFI*V*SF*VFLLFKLNSCLSFNFELVLVIYP  512

Range 6: 383 to 724 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
258.1 bits(557) 0.0 113/114(99%) 0/114(0%) Plus/Minus
Query     1090  KTKTKER*ANRTTLNKNRRERNS*KIRKKVLQTRP*IKLEEKVLTLRKG*KYYQHHKRKNEKRRSYLQEKEGYITNTNSKLKDKHEFNLNRRKT*ND*T*IKTLKGNLPHLELG  1431
                KTKTKER*ANRTTLNKNRRERNS*KIRKKVLQTRP*IKLEEKVLTLRKG KYYQHHKRKNEKRRSYLQEKEGYITNTNSKLKDKHEFNLNRRKT*ND*T*IKTLKGNLPHLELG
Subject    383  KTKTKER*ANRTTLNKNRRERNS*KIRKKVLQTRP*IKLEEKVLTLRKGKKYYQHHKRKNEKRRSYLQEKEGYITNTNSKLKDKHEFNLNRRKT*ND*T*IKTLKGNLPHLELG  724

Range 7: 778 to 1116 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
251.2 bits(542) 0.0 112/113(99%) 0/113(0%) Minus/Plus
Query      723  TLTPLWSFTGLIREIVTLISS*LTLNRPAALK*SIFLRSAPLTFILVSSPKG*SVYLPHHPLTAILGNSP*LAAMVWRLGRTARKSS*WLGQTRLTFPIVRIRPLRLKRSLIL  1061
                TLTPLWSFTGLIREIVTLISS*LTLNRPAALK*SIFLRSAPLTFILVSSPKG*SVYLPHHPLTAILGNSP*LAAMVW+LGRTARKSS*WLGQTRLTFPIVRIRPLRLKRSLIL
Subject    778  TLTPLWSFTGLIREIVTLISS*LTLNRPAALK*SIFLRSAPLTFILVSSPKG*SVYLPHHPLTAILGNSP*LAAMVWQLGRTARKSS*WLGQTRLTFPIVRIRPLRLKRSLIL  1116

Range 8: 111 to 377 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
217.3 bits(468) 0.0 88/89(99%) 0/89(0%) Plus/Minus
Query     1437  WKNEEHEKTKIENALCL*LGKLNTKVRTKNKNPKTHYTYLKENLTRRYSTQRKKNFLFF*LIRKNKHG*TKHDWKKIFFGF*NIGKTVT  1703
                WKNEEHEKTKIENALCL*LGKLNTK+RTKNKNPKTHYTYLKENLTRRYSTQRKKNFLFF*LIRKNKHG*TKHDWKKIFFGF*NIGKTVT
Subject    111  WKNEEHEKTKIENALCL*LGKLNTKIRTKNKNPKTHYTYLKENLTRRYSTQRKKNFLFF*LIRKNKHG*TKHDWKKIFFGF*NIGKTVT  377

Range 9: 9661 to 9831 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
138.5 bits(296) 0.0 57/57(100%) 0/57(0%) Minus/Plus
Query        3  FGG*RKCLGLAP*LPCKSHMLIA*AHLGVCPRVASVRCPAASSKGR*KCWALQV*WG  173
                FGG*RKCLGLAP*LPCKSHMLIA*AHLGVCPRVASVRCPAASSKGR*KCWALQV*WG
Subject   9661  FGG*RKCLGLAP*LPCKSHMLIA*AHLGVCPRVASVRCPAASSKGR*KCWALQV*WG  9831

Range 10: 9106 to 9288 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
138.1 bits(295) 0.0 59/61(97%) 0/61(0%) Minus/Plus
Query      546  ILPGVYRTINHESLCYGLLGEPSVRLIPVAILL*F*VSIFSSTRAICEGNTSGTSYSRLII  728
                ++PGVYRTINHESLCYGLLGEPSVRLIPVAILL*F*VSIFSSTRAICEGNTSGTSYSRLII
Subject   9106  LIPGVYRTINHESLCYGLLGEPSVRLIPVAILL*F*VSIFSSTRAICEGNTSGTSYSRLII  9288

Range 11: 558 to 638 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.7 bits(148) 0.0 26/27(96%) 0/27(0%) Minus/Plus
Query     1176  WCW*YFYPFLKVSTFSSNFI*GRVCKT  1256
                WCW*YF+PFLKVSTFSSNFI*GRVCKT
Subject    558  WCW*YFFPFLKVSTFSSNFI*GRVCKT  638

Range 12: 614 to 724 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.0 bits(142) 0.0 37/37(100%) 0/37(0%) Minus/Plus
Query     1090  YLGSCL*NLFPYFLAXXXXXXXX*CGPICLPFLRLSF  1200
                YLGSCL*NLFPYFLAISFSSIFI*CGPICLPFLRLSF
Subject    614  YLGSCL*NLFPYFLAISFSSIFI*CGPICLPFLRLSF  724

Range 13: 503 to 532 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.9 bits(48) 0.0 10/10(100%) 0/10(0%) Minus/Plus
Query     1282  NISFLFLKIT  1311
                NISFLFLKIT
Subject    503  NISFLFLKIT  532

Range 14: 9111 to 9623 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
401.1 bits(869) 0.0 171/171(100%) 0/171(0%) Plus/Minus
Query      211  NVRPTNMYTNRTQHFQRSKRAGCWPPVGP*PTLTLREKSQHMVCYHNSANRPKDIGENFSPSMHRRK*EGYPKRKNSLLYKSSRY*PHGLD*TKKYIDAKKGKNYEKT*LQKIIRRE*EVPLVLPSQMARVEEKIET*N*RRIATGINLTDGSPRRP*QRDS*FIVR*TPG  723
                NVRPTNMYTNRTQHFQRSKRAGCWPPVGP*PTLTLREKSQHMVCYHNSANRPKDIGENFSPSMHRRK*EGYPKRKNSLLYKSSRY*PHGLD*TKKYIDAKKGKNYEKT*LQKIIRRE*EVPLVLPSQMARVEEKIET*N*RRIATGINLTDGSPRRP*QRDS*FIVR*TPG
Subject   9111  NVRPTNMYTNRTQHFQRSKRAGCWPPVGP*PTLTLREKSQHMVCYHNSANRPKDIGENFSPSMHRRK*EGYPKRKNSLLYKSSRY*PHGLD*TKKYIDAKKGKNYEKT*LQKIIRRE*EVPLVLPSQMARVEEKIET*N*RRIATGINLTDGSPRRP*QRDS*FIVR*TPG  9623

Range 15: 749 to 1114 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
270.0 bits(583) 0.0 121/122(99%) 0/122(0%) Plus/Minus
Query      725  E*ETASNVTA*FVLSETSDEFDLATNLTFSPSALTATPLPLTKANCLV*PLTGDGANTRFTPWVSLPI*T*AAHFGEKSTTLAPPAGLRLTMNLLTSLFPLLNR*NSKVELT*GKEN*RKTQ  1090
                E*ETASNVTA*FVLSETSDEFDLATNLTFSPSALTATPLPLTKANCLV*PLTGDGANTRFTPWVSLPI*T*AAHFGEKSTTLAPPAGLRLTMNLLTSLFPLLNR*NSKVELT*GKEN*RKT+
Subject    749  E*ETASNVTA*FVLSETSDEFDLATNLTFSPSALTATPLPLTKANCLV*PLTGDGANTRFTPWVSLPI*T*AAHFGEKSTTLAPPAGLRLTMNLLTSLFPLLNR*NSKVELT*GKEN*RKTR  1114

Range 16: 50 to 337 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
203.1 bits(437) 0.0 90/96(94%) 0/96(0%) Plus/Minus
Query     1477  RYAYN*EN*IRKYVRKIKTQKHTILT*RKT*HDATPHKGRKIFCFSD**GKINTAKQNTTGRKYFLVFKI*ERQ*LNPKTTQIERKKMQRTQTHPT  1764
                RYAYN*EN*IRKYVRKIKTQKHTILT*RKT*HDATPHKGRKIFCFSD**GKINTAKQNTTGRKYFLVFKI*ERQ*LNPKTTQIERKK+Q T+   T
Subject     50  RYAYN*EN*IRKYVRKIKTQKHTILT*RKT*HDATPHKGRKIFCFSD**GKINTAKQNTTGRKYFLVFKI*ERQ*LNPKTTQIERKKVQGTRRKGT  337

Range 17: 9660 to 9830 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
153.2 bits(328) 0.0 57/57(100%) 0/57(0%) Plus/Minus
Query        4  PHYTCRAQHFQRPFELAAGHLTEATLGQTPKCAHAISMCDLHGSYGAKPKHFRHPPK  174
                PHYTCRAQHFQRPFELAAGHLTEATLGQTPKCAHAISMCDLHGSYGAKPKHFRHPPK
Subject   9660  PHYTCRAQHFQRPFELAAGHLTEATLGQTPKCAHAISMCDLHGSYGAKPKHFRHPPK  9830

Range 18: 462 to 638 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.0 bits(214) 0.0 58/59(98%) 0/59(0%) Plus/Minus
Query     1176  GFTNTTLNKVRRESADFKKRIEILPTPQXXXXXXXXXXXXXGRIYYQYQFKIKRQTRI*  1352
                GFTNTTLNKVRRESADFKKR EILPTPQKKKREKKKLSSRKGRIYYQYQFKIKRQTRI*
Subject    462  GFTNTTLNKVRRESADFKKRKEILPTPQKKKREKKKLSSRKGRIYYQYQFKIKRQTRI*  638

Range 19: 678 to 725 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.3 bits(73) 0.0 16/16(100%) 0/16(0%) Plus/Minus
Query     1089  KN*DEGKVSK*DHTK*  1136
                KN*DEGKVSK*DHTK*
Subject    678  KN*DEGKVSK*DHTK*  725

Range 20: 9494 to 9829 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
272.8 bits(589) 0.0 112/112(100%) 0/112(0%) Plus/Minus
Query        5  PTIPAEPSTFSALLSWLLDT*PRLP*GKRPNALTQSACATYMVATVLNLNTSVIPQRLARLYCCTRPKQMFGQLTCTRTEPNTSSALKEQAVGHLLDPNLP*RYEKSHNTWC  340
                PTIPAEPSTFSALLSWLLDT*PRLP*GKRPNALTQSACATYMVATVLNLNTSVIPQRLARLYCCTRPKQMFGQLTCTRTEPNTSSALKEQAVGHLLDPNLP*RYEKSHNTWC
Subject   9494  PTIPAEPSTFSALLSWLLDT*PRLP*GKRPNALTQSACATYMVATVLNLNTSVIPQRLARLYCCTRPKQMFGQLTCTRTEPNTSSALKEQAVGHLLDPNLP*RYEKSHNTWC  9829

Range 21: 9112 to 9453 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
268.2 bits(579) 0.0 114/114(100%) 0/114(0%) Plus/Minus
Query      381  KFLPIYAPTKVGRVPQKKKLSTVQVKPVLTSRTRLNEKIHRRQERKELRKDLATKNNKTRIRSATGIALTDGTRRREN*NLKLKKDRHWY*PHRWLA*KTVTKGFMIYSTINTR  722
                KFLPIYAPTKVGRVPQKKKLSTVQVKPVLTSRTRLNEKIHRRQERKELRKDLATKNNKTRIRSATGIALTDGTRRREN*NLKLKKDRHWY*PHRWLA*KTVTKGFMIYSTINTR
Subject   9112  KFLPIYAPTKVGRVPQKKKLSTVQVKPVLTSRTRLNEKIHRRQERKELRKDLATKNNKTRIRSATGIALTDGTRRREN*NLKLKKDRHWY*PHRWLA*KTVTKGFMIYSTINTR  9453

Range 22: 751 to 981 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
172.9 bits(371) 0.0 77/77(100%) 0/77(0%) Plus/Minus
Query      858  IA*YSR*RVMGQIHASPLG*AYQYKRKRRTSEKNRLL*RRRPV*G*L*TY*RHYFPY*TGKTPKWS*REERRTDAKH  1088
                IA*YSR*RVMGQIHASPLG*AYQYKRKRRTSEKNRLL*RRRPV*G*L*TY*RHYFPY*TGKTPKWS*REERRTDAKH
Subject    751  IA*YSR*RVMGQIHASPLG*AYQYKRKRRTSEKNRLL*RRRPV*G*L*TY*RHYFPY*TGKTPKWS*REERRTDAKH  981

Range 23: 106 to 276 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
135.8 bits(290) 0.0 57/57(100%) 0/57(0%) Plus/Minus
Query     1538  NTLYLLEGKLNTTLLHTKEEKFFVFLTNKEK*TRLNKTRLEENIFWFLKYRKDSN*T  1708
                NTLYLLEGKLNTTLLHTKEEKFFVFLTNKEK*TRLNKTRLEENIFWFLKYRKDSN*T
Subject    106  NTLYLLEGKLNTTLLHTKEEKFFVFLTNKEK*TRLNKTRLEENIFWFLKYRKDSN*T  276

Range 24: 448 to 531 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
64.3 bits(134) 0.0 28/28(100%) 0/28(0%) Plus/Minus
Query     1283  VIFKKRKDILPIPIQN*KTNTNLT*IEG  1366
                VIFKKRKDILPIPIQN*KTNTNLT*IEG
Subject    448  VIFKKRKDILPIPIQN*KTNTNLT*IEG  531

Range 25: 1060 to 1137 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 20/26(77%) 0/26(0%) Plus/Minus
Query      702  YSTINTRENERPLQT*RPDSYYRKRQ  779
                Y+     ENERPLQT*RPDSYYRKRQ
Subject   1060  YNNGRRGENERPLQT*RPDSYYRKRQ  1137

Range 26: 589 to 639 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.4 bits(84) 0.0 17/17(100%) 0/17(0%) Plus/Minus
Query     1175  RFYKHDPK*S*KRKC*L  1225
                RFYKHDPK*S*KRKC*L
Subject    589  RFYKHDPK*S*KRKC*L  639

Range 27: 685 to 723 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.0 bits(70) 0.0 13/13(100%) 0/13(0%) Plus/Minus
Query     1091  KLRRRKGKQIGPH  1129
                KLRRRKGKQIGPH
Subject    685  KLRRRKGKQIGPH  723

Range 28: 9345 to 9740 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
303.0 bits(655) 0.0 132/132(100%) 0/132(0%) Minus/Plus
Query       94  RLV*SVRLIPA*LVQ*RVFSFGVPFLLSSVHRWGEIFSYIFGTIGAIMIAHHVL*LFS*RQGRLGSNRWPTACSFRALEVLGSVRVHVSWPNICLGRVQQ*SLASLWGMTEVFRFSTVATM*VAHADCVSAF  489
                RLV*SVRLIPA*LVQ*RVFSFGVPFLLSSVHRWGEIFSYIFGTIGAIMIAHHVL*LFS*RQGRLGSNRWPTACSFRALEVLGSVRVHVSWPNICLGRVQQ*SLASLWGMTEVFRFSTVATM*VAHADCVSAF
Subject   9345  RLV*SVRLIPA*LVQ*RVFSFGVPFLLSSVHRWGEIFSYIFGTIGAIMIAHHVL*LFS*RQGRLGSNRWPTACSFRALEVLGSVRVHVSWPNICLGRVQQ*SLASLWGMTEVFRFSTVATM*VAHADCVSAF  9740

Range 29: 753 to 1142 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
288.8 bits(624) 0.0 123/130(95%) 0/130(0%) Minus/Plus
Query      697  VLRQFSFPHVNSTLEFYRFNKGNSDVNKFIVNLKPAGGAKVVDFSPKCAAYVYIGKLTQGVKRVFAPSPVNGYTRQFALVSGNGVAVRADGEKVKLVARSNSSDVSDSTNQAVTFEAVSHSPGCLSYYKS  1086
                VLRQFSFPHVNSTLEFYRFNKGNSDVNKFIVNLKPAGGAKVVDFSPKCAAYVYIGKLTQGVKRVFAPSPVNGYTRQFALVSGNGVAVRADGEKVKLVARSNSSDVSDSTNQAVTFEAVSHS   + YY++
Subject    753  VLRQFSFPHVNSTLEFYRFNKGNSDVNKFIVNLKPAGGAKVVDFSPKCAAYVYIGKLTQGVKRVFAPSPVNGYTRQFALVSGNGVAVRADGEKVKLVARSNSSDVSDSTNQAVTFEAVSHSLLVVHYYRT  1142

Range 30: 68 to 214 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
115.6 bits(246) 0.0 48/49(98%) 0/49(0%) Minus/Plus
Query     1600  SLHLFSFYLGCFWV*LLSFLYFKNQKIFSSSRVLFSRVYFSLLVRKTKN  1746
                +LHLFSFYLGCFWV*LLSFLYFKNQKIFSSSRVLFSRVYFSLLVRKTKN
Subject     68  TLHLFSFYLGCFWV*LLSFLYFKNQKIFSSSRVLFSRVYFSLLVRKTKN  214

Range 31: 9716 to 9832 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
94.1 bits(199) 0.0 39/39(100%) 0/39(0%) Minus/Plus
Query        2  TC*LRERIWAFALG*PRLGVQQPAQKGAESAGLCRYSGV  118
                TC*LRERIWAFALG*PRLGVQQPAQKGAESAGLCRYSGV
Subject   9716  TC*LRERIWAFALG*PRLGVQQPAQKGAESAGLCRYSGV  9832

Range 32: 9113 to 9244 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.6 bits(128) 0.0 44/44(100%) 0/44(0%) Minus/Plus
Query      590  RVFIVL*IMNPFVTVF*ASHL*G*YQWXXXXXXXXXXXXXRVPS  721
                RVFIVL*IMNPFVTVF*ASHL*G*YQWRSFFSFRFQFSLLRVPS
Subject   9113  RVFIVL*IMNPFVTVF*ASHL*G*YQWRSFFSFRFQFSLLRVPS  9244

Range 33: 272 to 337 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.1 bits(103) 0.0 21/22(95%) 0/22(0%) Minus/Plus
Query     1477  VFLGFYFSYVLSYLVFLVISIA  1542
                VFLGFYFSYV SYLVFLVISIA
Subject    272  VFLGFYFSYVFSYLVFLVISIA  337

Range 34: 398 to 457 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 20/20(100%) 0/20(0%) Minus/Plus
Query     1357  W*VAF*CFYLSLIVLGFPSI  1416
                W*VAF*CFYLSLIVLGFPSI
Subject    398  W*VAF*CFYLSLIVLGFPSI  457

Range 35: 460 to 567 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.8 bits(63) 0.0 36/36(100%) 0/36(0%) Minus/Plus
Query     1247  S*IRVCXXXXXXXXXXXLPFLEDNXXXXXXXFCGVG  1354
                S*IRVCLLILNWYW*YILPFLEDNFFFSRFFFCGVG
Subject    460  S*IRVCLLILNWYW*YILPFLEDNFFFSRFFFCGVG  567

Range 36: 319 to 348 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
27.2 bits(53) 0.0 10/10(100%) 0/10(0%) Minus/Plus
Query     1466  PSYKHSAFSI  1495
                PSYKHSAFSI
Subject    319  PSYKHSAFSI  348

Range 37: 9325 to 9624 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
240.3 bits(518) 0.0 100/100(100%) 0/100(0%) Minus/Plus
Query      210  LASMYFFV*SSP*G*YRLDLYSREFFLLGYPSYFRRCIDGEKFSPISLGRLALL**HTMCCDFSRSVRVG*GPTGGQQPALLERWKCWVRFVYMLVGRTF  509
                LASMYFFV*SSP*G*YRLDLYSREFFLLGYPSYFRRCIDGEKFSPISLGRLALL**HTMCCDFSRSVRVG*GPTGGQQPALLERWKCWVRFVYMLVGRTF
Subject   9325  LASMYFFV*SSP*G*YRLDLYSREFFLLGYPSYFRRCIDGEKFSPISLGRLALL**HTMCCDFSRSVRVG*GPTGGQQPALLERWKCWVRFVYMLVGRTF  9624

Range 38: 911 to 1117 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
136.7 bits(292) 0.0 68/69(99%) 0/69(0%) Minus/Plus
Query      722  YW*AHPRGEACICPITR*RLY*AIRLS*RQWCXXXXXXRESQVSG*VKLV*RFR*YESGRYV*SGLSFS  928
                YW*AHPRGEACICPITR*RLY*AIRLS*RQWCG *GGRRESQVSG*VKLV*RFR*YESGRYV*SGLSFS
Subject    911  YW*AHPRGEACICPITR*RLY*AIRLS*RQWCGS*GGRRESQVSG*VKLV*RFR*YESGRYV*SGLSFS  1117

Range 39: 157 to 243 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.6 bits(150) 0.0 29/29(100%) 0/29(0%) Minus/Plus
Query     1571  QSCFV*PCLFFLISQKNKKFFFLCVE*RR  1657
                QSCFV*PCLFFLISQKNKKFFFLCVE*RR
Subject    157  QSCFV*PCLFFLISQKNKKFFFLCVE*RR  243

Range 40: 752 to 859 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.6 bits(150) 0.0 36/36(100%) 0/36(0%) Minus/Plus
Query      980  CFASVLLSSR*LHFGVLPV**GK**R**VHS*P*TG  1087
                CFASVLLSSR*LHFGVLPV**GK**R**VHS*P*TG
Subject    752  CFASVLLSSR*LHFGVLPV**GK**R**VHS*P*TG  859

Range 41: 9789 to 9830 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
32.7 bits(65) 0.0 14/14(100%) 0/14(0%) Minus/Plus
Query        4  KRALKVLGSAGIVG  45
                KRALKVLGSAGIVG
Subject   9789  KRALKVLGSAGIVG  9830

Range 42: 493 to 549 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.1 bits(55) 0.0 10/19(53%) 0/19(0%) Minus/Plus
Query     1200  WCW*YFYPFLKVSTFSSNF  1256
                W W*Y  PFL+ + F S F
Subject    493  WYW*YILPFLEDNFFFSRF  549

Range 43: 9221 to 9274 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
27.2 bits(53) 0.0 11/18(61%) 0/18(0%) Minus/Plus
Query      630  YGLLGEPSVRLIPVAILL  683
                + LL  PSVR IPVA+L+
Subject   9221  FSLLRVPSVRAIPVALLI  9274

Range 44: 9045 to 9266 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
129.4 bits(276) 0.0 54/74(73%) 0/74(0%) Minus/Plus
Query      568  SNSSDVSDSTNQAVTFEAVSHSPGCLSYYKS*IPLLRSSRRAICEVNTSGDPSLVLGFNFLFYACHL*GQYQWH  789
                +   +VS  T+          + GCLSYYKS*IPLLRSSRRAICEVNTSGDPSLVLGFNFLFYACHL*GQYQWH
Subject   9045  AEGGEVSCLTSVFCALNTREANTGCLSYYKS*IPLLRSSRRAICEVNTSGDPSLVLGFNFLFYACHL*GQYQWH  9266

Range 45: 447 to 653 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.5 bits(106) 0.0 30/69(43%) 0/69(0%) Plus/Minus
Query     1096  KTKER*ANRTTLNKNRRERNS*KIRKKVLQTRP*IKLEEKVLTLRKG*KYYQHHKRKNEKRRSYLQEKE  1302
                K KE+    TTLNK RRE    K RK++L T    K E+K L+ RKG  YYQ+  +   + R  L+ KE
Subject    447  KNKEKGFTNTTLNKVRRESADFKKRKEILPTPQKKKREKKKLSSRKGRIYYQYQFKIKRQTRI*LK*KE  653

Range 46: 9145 to 9201 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.3 bits(62) 0.0 12/19(63%) 0/19(0%) Plus/Minus
Query      563  KKCHWYCPHRWHA*KRKLK  619
                K  HWY PHRW A*K   K
Subject   9145  KDRHWY*PHRWLA*KTVTK  9201

Range 47: 299 to 421 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.6 bits(56) 0.0 17/41(41%) 0/41(0%) Plus/Minus
Query     1458  KTKIENALCL*LGKLNTKVRTKNKNPKTHYTYLKENLTRRY  1580
                KT   N   L LGK      TK +  KT Y Y  EN  R+Y
Subject    299  KTLKGNLPHLELGKTGKTKNTKKQK*KTRYAYN*EN*IRKY  421

Grapevine leafroll associated virus 3 isolate TC BR, complete genome

Sequence ID: KX756668.1 Length: 18498 Number of Matches: 39

Range 1: 756 to 1139 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
168.3 bits(361) 0.0 69/128(54%) 0/128(0%) Minus/Plus
Query      700  LRQFSFPHVNSTLEFYRFNKGNSDVNKFIVNLKPAGGAKVVDFSPKCAAYVYIGKLTQGVKRVFAPSPVNGYTRQFALVSGNGVAVRADGEKVKLVARSNSSDVSDSTNQAVTFEAVSHSPGCLSYYK  1083
                LR FSFPHVN+TLE+ R+NK NSDV  F+  +K  G  K+ DF+PK AA +YIGKLT+GVKR FAP PV G+ RQ+A+VSG    +R DG+KV + AR+++S VSD+++  V FEAV+H+   + Y++
Subject    756  LRVFSFPHVNNTLEYIRYNKANSDVGAFLTAMKFTGNVKLSDFTPKSAALIYIGKLTKGVKRTFAPPPVKGFARQYAVVSGTVSVLRGDGKKVLMEARTSTSAVSDASSYDVVFEAVTHALIVVHYHR  1139

Range 2: 9313 to 9501 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.6 bits(150) 0.0 31/63(49%) 0/63(0%) Minus/Plus
Query      243  LLGYPSYFRRCIDGEKFSPISLGRLALL**HTMCCDFSRSVRVG*GPTGGQQPALLERWKCWV  431
                +LGYPSY  R      ++P+S G+     *   C DF   V+VG GPTG QQPAL  RWKCW+
Subject   9313  VLGYPSYSCRSAYAGVYTPVSYGQETHQL*RARCRDF*PCVKVGWGPTGDQQPALKVRWKCWI  9501

Range 3: 9476 to 9622 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.9 bits(120) 0.0 29/49(59%) 0/49(0%) Minus/Plus
Query      112  LEVLGSVRVHVSWPNICLGRVQQ*SLASLWGMTEVFRFSTVATM*VAHA  258
                L+  GSV   +S PNI LG VQ  SL  LWGMT   RF TVA M*V HA
Subject   9476  LKCAGSVGFGLSVPNILLGDVQVFSLVCLWGMTGATRFRTVAAM*VVHA  9622

Range 4: 9646 to 9732 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.9 bits(83) 0.0 19/29(66%) 0/29(0%) Minus/Plus
Query       12  HLGVCPRVASVRCPAASSKGR*KCWALQV  98
                HLG  PR ASVRC AA S  R*KC  L+V
Subject   9646  HLGGSPRAASVRCLAAGSTER*KC*VLKV  9732

Range 5: 78 to 173 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.4 bits(60) 0.0 15/32(47%) 0/32(0%) Minus/Plus
Query     1639  FSFYLGCFWV*LLSFLYFKNQKIFSSSRVLFS  1734
                F FY  CFWV  LSF   K +  F  S V+ S
Subject     78  FVFYFSCFWVLRLSFS*TKTKVNFFFSAVVSS  173

Range 6: 9123 to 9203 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.0 bits(57) 0.0 15/27(56%) 0/27(0%) Minus/Plus
Query      631  SYYKS*IPLLRSSRRAICEVNTSGDPS  711
                SY      L  S RRAI EVNT G PS
Subject   9123  SYLSQSSSLSSSLRRAIREVNTGGTPS  9203

Range 7: 9245 to 9307 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.8 bits(50) 0.0 12/21(57%) 0/21(0%) Minus/Plus
Query      432  FFV*SSP*G*YRLDLYSREFF  494
                F V  +P*G* R ++YSR FF
Subject   9245  FLVLFTP*G*DRWNMYSRAFF  9307

Range 8: 758 to 1105 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.7 bits(209) 0.0 58/116(50%) 0/116(0%) Plus/Minus
Query      734  TASNVTA*FVLSETSDEFDLATNLTFSPSALTATPLPLTKANCLV*PLTGDGANTRFTPWVSLPI*T*AAHFGEKSTTLAPPAGLRLTMNLLTSLFPLLNR*NSKVELT*GKEN*R  1081
                TASN T+*   SET++   LA+  TF PS L    +PLT A C   PLTG GAN RFTP VSLPI   AA  G KS     P          TSL  LL    SKV LT*GKE  R
Subject    758  TASNTTS*LDASETAEVEVLASIKTFLPSPLNTLTVPLTTAYCRANPLTGGGANVRFTPLVSLPIYMRAALLGVKSDNFTFPVNFMAVRKAPTSLLALLYLMYSKVLLT*GKEKTR  1105

Range 9: 9487 to 9624 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.7 bits(124) 0.0 26/46(57%) 0/46(0%) Plus/Minus
Query      110  SACATYMVATVLNLNTSVIPQRLARLYCCTRPKQMFGQLTCTRTEP  247
                +AC TYM ATVLNL   VIPQR  +L  CT PK++FG L    T P
Subject   9487  AACTTYMAATVLNLVAPVIPQRHTKLNTCTSPKRIFGTLRPNPTLP  9624

Range 10: 9366 to 9506 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.9 bits(120) 0.0 24/47(51%) 0/47(0%) Plus/Minus
Query      238  NRTQHFQRSKRAGCWPPVGP*PTLTLREKSQHMVCYHNSANRPKDIG  378
                ++ QHFQR+  AGCW PVGP PTLT   KS+H+  Y    + P D G
Subject   9366  DQIQHFQRTLSAGCWSPVGPHPTLTQG*KSRHLARYS*CVSCP*DTG  9506

Range 11: 9629 to 9739 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.1 bits(114) 0.0 26/37(70%) 0/37(0%) Plus/Minus
Query        5  PTIPAEPSTFSALLSWLLDT*PRLP*GKRPNALTQSA  115
                PT+P+ PSTFSA  S LLDT*P LP*G RPNA T  A
Subject   9629  PTVPSGPSTFSAP*SRLLDT*PMLP*GFRPNACTSYA  9739

Range 12: 9147 to 9203 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.3 bits(73) 0.0 15/19(79%) 0/19(0%) Plus/Minus
Query      631  RRIATGINLTDGSPRRP*Q  687
                RR ATGINLTDG+P+R *Q
Subject   9147  RRSATGINLTDGTPKRR*Q  9203

Range 13: 118 to 255 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.8 bits(63) 0.0 17/46(37%) 0/46(0%) Plus/Minus
Query     1494  GKLNTKVRTKNKNPKTHYTYLKENLTRRYSTQRKKNFLFF*LIRKN  1631
                GKL    R   K  +  +   KEN  R Y  Q K+  L   L RKN
Subject    118  GKLKMTRRDVLKGEEIFFVIFKENYNRNY*QQLKRKNLLLFLFRKN  255

Range 14: 9246 to 9305 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.3 bits(62) 0.0 12/20(60%) 0/20(0%) Plus/Minus
Query      434  KTLYCTSQAGINLTD*TKRK  493
                KTLYCT   G++LT *TK++
Subject   9246  KTLYCTCSTGLSLTV*TKQE  9305

Range 15: 255 to 350 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
26.7 bits(52) 0.0 13/32(41%) 0/32(0%) Plus/Minus
Query     1273  KRRSYLQEKEGYITNTNSKLKDKHEFNLNRRK  1368
                KR + L+   G     N+K + K + NLNRRK
Subject    255  KRTNPLKRHLGKTKTKNTKTQRKLDANLNRRK  350

Range 16: 9317 to 9355 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.4 bits(49) 0.0 8/13(62%) 0/13(0%) Plus/Minus
Query      389  PHLCTDESRKGTP  427
                PH+ +D+SRKG P
Subject   9317  PHMRSDKSRKGNP  9355

Range 17: 9400 to 9504 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.2 bits(101) 0.0 21/35(60%) 0/35(0%) Plus/Minus
Query      240  PNPTLPAL*KSRLLATCWTLTYPDATRKVTTHGVL  344
                PNPTLPA  K RLL TCW  +Y D   KV T G L
Subject   9400  PNPTLPAHFKCRLLVTCWPPSYLDTRLKVATPGAL  9504

Range 18: 9633 to 9740 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 20/36(56%) 0/36(0%) Plus/Minus
Query        4  PHYTCRAQHFQRPFELAAGHLTEATLGQTPKCAHAI  111
                P+ T R  HFQR  E AA HLT+A LG  PKC H +
Subject   9633  PNCTFRT*HFQRSVEPAARHLTDAALGLPPKCMHVL  9740

Range 19: 9528 to 9620 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.3 bits(99) 0.0 21/31(68%) 0/31(0%) Plus/Minus
Query      114  HVRLTW*LRC*T*TLPSSPKDSLDSTAVHDL  206
                H RLTW L+ *T*+LPSSPKD+L+ T VH L
Subject   9528  HARLTWQLQS*T*SLPSSPKDTLN*TPVHHL  9620

Range 20: 9133 to 9201 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.1 bits(68) 0.0 12/23(52%) 0/23(0%) Plus/Minus
Query      563  KKCHWYCPHRWHA*KRKLKPKTK  631
                K+CH Y PH WHA*++    KT+
Subject   9133  KECHRY*PHGWHA*EKMTNWKTE  9201

Range 21: 9244 to 9309 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.4 bits(60) 0.0 12/22(55%) 0/22(0%) Plus/Minus
Query      430  RKNSLLYKSSRY*PHGLD*TKK  495
                +KN+LLY   R *PHG++ T+K
Subject   9244  KKNALLYMFHRS*PHGVNKTRK  9309

Range 22: 9307 to 9351 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.5 bits(45) 0.0 10/15(67%) 0/15(0%) Plus/Minus
Query      393  IYAPTKVGRVPQKKK  437
                I APT+VGRV Q  K
Subject   9307  ICAPTRVGRVTQDLK  9351

Range 23: 9308 to 9505 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
60.6 bits(126) 0.0 35/66(53%) 0/66(0%) Minus/Plus
Query      239  FFFWGTLPTFVGA*MGRNFLLYLWDDWRYYDSTPCVVTFLVASG*VRVQQVANSLLF*SAGSVGFG  436
                F  W TLPT VGA M    LLYL D      S P V TF + S *   QQV NSL    AGSVGFG
Subject   9308  FKSWVTLPTLVGAHMREFILLYLTDKRHISYSAPGVATFSLVSR*DGGQQVTNSLHLKCAGSVGFG  9505

Range 24: 898 to 1005 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
42.8 bits(87) 0.0 20/36(56%) 0/36(0%) Minus/Plus
Query      834  PLTFILVSSPKG*SVYLPHHPLTAILGNSP*LAAMV  941
                PL++ILVSSPKG*S   P H L  + GN+P  AA +
Subject    898  PLSYILVSSPKG*SGRSPPHQLKGLRGNTPL*AAQL  1005

Range 25: 9629 to 9742 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
39.6 bits(80) 0.0 22/38(58%) 0/38(0%) Minus/Plus
Query        2  C*LRERIWAFALG*PRLGVQQPAQKGAESAGLCRYSGV  115
                C  R  IWA ALG  R GV QPA + AESA   RYS V
Subject   9629  CVRRACIWAEALGQHRSGV*QPALRSAESARS*RYSWV  9742

Range 26: 9106 to 9204 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.6 bits(78) 0.0 18/33(55%) 0/33(0%) Minus/Plus
Query      630  ILPGVYRTINHESLCYGLLGEPSVRLIPVAILL  728
                ++P   RT     +C+ LLG PSVRLIPVA+LL
Subject   9106  LIPKGRRTYLSLPVCHLLLGVPSVRLIPVALLL  9204

Range 27: 9561 to 9620 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
32.7 bits(65) 0.0 15/20(75%) 0/20(0%) Minus/Plus
Query      114  FGG*RKCLGLAP*LPCKSHM  173
                FGG*R+ LGL  *LPCKS M
Subject   9561  FGG*RERLGLGL*LPCKSCM  9620

Range 28: 9514 to 9576 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.8 bits(63) 0.0 13/21(62%) 0/21(0%) Minus/Plus
Query      158  AEHLFRSCTAVESSESLGDDG  220
                A++ FR CT V+ S SLGDDG
Subject   9514  AKYPFR*CTGVQFSVSLGDDG  9576

Range 29: 4653 to 4736 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.4 bits(49) 0.0 12/28(43%) 0/28(0%) Minus/Plus
Query      706  SNSSDVSDSTNQAVTFEAVSHSPGCLSY  789
                +N  DV  STN  V  E  +HSP  + Y
Subject   4653  TNVRDVGISTNGEVVGEEETHSPRSVLY  4736

Range 30: 9407 to 9508 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 22/34(65%) 0/34(0%) Plus/Minus
Query      236  RTEPNTSSALKEQAVGHLLDPNLP*RYEKSHNTW  337
                +T+ NTSSAL  QAVGHLL P LP*   KS +TW
Subject   9407  KTKSNTSSAL*VQAVGHLLAPILP*HKAKSRDTW  9508

Range 31: 9628 to 9741 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.9 bits(96) 0.0 23/38(61%) 0/38(0%) Plus/Minus
Query        3  TPLYLQSPALSAPF*AGCWTPNRGYPRANAQMRSRNQH  116
                T LYLQ  ALSA   AGC TP+R  PRA+AQM +R  H
Subject   9628  TQLYLQDLALSALRRAGC*TPDRCCPRASAQMHARLTH  9741

Range 32: 891 to 1115 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.9 bits(96) 0.0 29/75(39%) 0/75(0%) Plus/Minus
Query      724  RMRDRFKRNGLIRTIGNVRRV*PSH*LDFLAVRPNRHTIAAN*GELPSIAVNG*WGKYTLHPLGELTNINVSGAL  948
                RM   FK + + R +GN R   P    + L +       AA+ G LP    N   G+  LHP GELTNI  SG L
Subject    891  RMCYSFKYDVVTRRVGNCRS*GPRLHQNLLTIPSQYTNCAAHNGVLPRKPFNWWGGERPLHPFGELTNIYESGTL  1115

Range 33: 9560 to 9619 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.6 bits(78) 0.0 14/20(70%) 0/20(0%) Plus/Minus
Query      115  MCDLHGSYGAKPKHFRHPPK  174
                M DLHGSY  KP   RHPPK
Subject   9560  MHDLHGSYSPKPSRSRHPPK  9619

Range 34: 9112 to 9216 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.4 bits(60) 0.0 15/35(43%) 0/35(0%) Plus/Minus
Query      618  NLKLKKDRHWY*PHRWLA*KTVTKGFMIYSTINTR  722
                N   KK+ H Y*PH W A*+ +T      ST   R
Subject   9112  NTHFKKECHRY*PHGWHA*EKMTNWKTEISTTTLR  9216

Range 35: 9245 to 9334 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.9 bits(59) 0.0 14/30(47%) 0/30(0%) Plus/Minus
Query      405  TKVGRVPQKKKLSTVQVKPVLTSRTRLNEK  494
                ++ G    K+K STV V PVL SR   N+K
Subject   9245  SRKGNPGLKEKRSTVHVPPVLASRCEQNKK  9334

Range 36: 750 to 827 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.6 bits(56) 0.0 12/26(46%) 0/26(0%) Plus/Minus
Query     1012  VTISLIKPVKLQSGVNVRKGELTQNT  1089
                + ISL+ P  LQ  +++RKGE  Q T
Subject    750  IAISLVVPNVLQGIIDMRKGENAQRT  827

Range 37: 9318 to 9506 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.6 bits(115) 0.0 30/63(48%) 0/63(0%) Minus/Plus
Query      238  GVPFLLSSVHRWGEIFSYIFGTIGAIMIAHHVL*LFS*RQGRLGSNRWPTACSFRALEVLGSV  426
                G+PFLL S    G ++S I  T     IA  V  L +  QGR+G+NR PTAC+  ALEVL  V
Subject   9318  GLPFLLLSERICGSLYSCILRTRDTSAIARQVSRLLALCQGRMGANR*PTACT*SALEVLDLV  9506

Range 38: 911 to 985 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.5 bits(69) 0.0 16/25(64%) 0/25(0%) Minus/Plus
Query      854  YW*AHPRGEACICPITR*RLY*AIR  928
                YW*AH RGEA + P T *R+  AIR
Subject    911  YW*AHQRGEADVRPPTS*RVCAAIR  985

Range 39: 9164 to 9196 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.9 bits(48) 0.0 8/11(73%) 0/11(0%) Minus/Plus
Query      568  ACHL*GQYQWH  600
                ACH *G Y+WH
Subject   9164  ACHP*G*YRWH  9196

Grapevine leafroll associated virus 3 isolate WA MR, complete genome

Sequence ID: GU983863.1 Length: 18498 Number of Matches: 36

Range 1: 756 to 1139 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
166.5 bits(357) 0.0 68/128(53%) 0/128(0%) Minus/Plus
Query      700  LRQFSFPHVNSTLEFYRFNKGNSDVNKFIVNLKPAGGAKVVDFSPKCAAYVYIGKLTQGVKRVFAPSPVNGYTRQFALVSGNGVAVRADGEKVKLVARSNSSDVSDSTNQAVTFEAVSHSPGCLSYYK  1083
                LR FSFPHVN+TLE+ R+NK N DV  F+  +K  G  K+ DF+PKCAA +YIGKLT+GVKR F P PV G+ RQ+A+VSG+  A+R DG+KV + AR+++S  SD ++  V FEAVS++   + Y++
Subject    756  LRVFSFPHVNNTLEYVRYNKANGDVGAFLTTMKFTGNVKLSDFTPKCAAMIYIGKLTKGVKRTFVPPPVKGFARQYAVVSGSVSALRGDGKKVLMEARTSTSATSDVSDFDVVFEAVSNALLVVHYHR  1139

Range 2: 9313 to 9501 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.2 bits(149) 0.0 32/63(51%) 0/63(0%) Minus/Plus
Query      243  LLGYPSYFRRCIDGEKFSPISLGRLALL**HTMCCDFSRSVRVG*GPTGGQQPALLERWKCWV  431
                +LGYPSY  R +     +P+S G+     *   C DF   V VG*GPTG QQPAL  RWKCW+
Subject   9313  VLGYPSYSCRSVHVGV*TPVSYGQETHQL*RAKCRDF*PCVEVG*GPTGDQQPALKVRWKCWI  9501

Range 3: 9476 to 9622 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.3 bits(123) 0.0 29/49(59%) 0/49(0%) Minus/Plus
Query      112  LEVLGSVRVHVSWPNICLGRVQQ*SLASLWGMTEVFRFSTVATM*VAHA  258
                L   GSV   +S PNI LG VQ+ SL  LWGMT   RF TVA M*V HA
Subject   9476  LRCAGSVGFGLSVPNILLGDVQESSLVCLWGMTGATRFRTVAAM*VVHA  9622

Range 4: 9646 to 9732 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.0 bits(81) 0.0 19/29(66%) 0/29(0%) Minus/Plus
Query       12  HLGVCPRVASVRCPAASSKGR*KCWALQV  98
                HLG CPR ASVR  AA S  R*KC  L+V
Subject   9646  HLGECPRAASVR*LAAGSTER*KC*VLKV  9732

Range 5: 9157 to 9204 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.3 bits(62) 0.0 13/16(81%) 0/16(0%) Minus/Plus
Query      630  LLGEPSVRLIPVAILL  677
                LLG PSV+LIPVA+LL
Subject   9157  LLGVPSVKLIPVALLL  9204

Range 6: 78 to 173 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.8 bits(50) 0.0 13/32(41%) 0/32(0%) Minus/Plus
Query     1639  FSFYLGCFWV*LLSFLYFKNQKIFSSSRVLFS  1734
                F FY  CFWV   +F   K +  F  S V+ S
Subject     78  FIFYFSCFWVLSFNFS*RKTK*KFFLSAVVSS  173

Range 7: 9248 to 9307 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.4 bits(49) 0.0 12/20(60%) 0/20(0%) Minus/Plus
Query      432  FV*SSP*G*YRLDLYSREFF  491
                FV  +P*G* R ++YSR FF
Subject   9248  FVLFTP*G*DRWNMYSRGFF  9307

Range 8: 758 to 1108 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
95.9 bits(203) 0.0 56/117(48%) 0/117(0%) Plus/Minus
Query      731  ETASNVTA*FVLSETSDEFDLATNLTFSPSALTATPLPLTKANCLV*PLTGDGANTRFTPWVSLPI*T*AAHFGEKSTTLAPPAGLRLTMNLLTSLFPLLNR*NSKVELT*GKEN*R  1081
                ETASN T+    SE ++   LA+  TF PS L+A   PLT A C   PLTG G N RFTP VS P+*  AAH G KS     P    +     TS   LL    SKV LT*GKE  R
Subject    758  ETASNTTSKSDTSEVAEVEVLASIKTFLPSPLSALTEPLTTAYCRANPLTGGGTNVRFTPLVSFPM*IIAAHLGVKSDNFTFPVNFMVVRKAPTSPLALLYLTYSKVLLT*GKEKTR  1108

Range 9: 9294 to 9506 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
64.8 bits(135) 0.0 31/71(44%) 0/71(0%) Plus/Minus
Query      238  NRTQHFQRSKRAGCWPPVGP*PTLTLREKSQHMVCYHNSANRPKDIGENFSPSMHRRK*EGYPKRKNSLLY  450
                ++ QHFQR+  AGCW PVGP PT T   KS+H+  Y    + P D G        R++*EG PK     LY
Subject   9294  DQIQHFQRTLSAGCWSPVGPYPTSTQG*KSRHLARYS*CVSCP*DTGVQTPTCTLRQE*EG*PKT*RKTLY  9506

Range 10: 9487 to 9624 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.4 bits(119) 0.0 25/46(54%) 0/46(0%) Plus/Minus
Query      110  SACATYMVATVLNLNTSVIPQRLARLYCCTRPKQMFGQLTCTRTEP  247
                +AC TY+ ATVLNL   VIPQR  +L  CT PK++FG L    T P
Subject   9487  AACTTYIAATVLNLVAPVIPQRHTKLDSCTSPKRIFGTLRPNPTLP  9624

Range 11: 9629 to 9739 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.9 bits(107) 0.0 25/37(68%) 0/37(0%) Plus/Minus
Query        5  PTIPAEPSTFSALLSWLLDT*PRLP*GKRPNALTQSA  115
                PT+P+ PSTFSA  S LL T*P LP*G RPNA T  A
Subject   9629  PTVPSGPSTFSAP*SRLLVT*PTLP*GTRPNACTSYA  9739

Range 12: 9156 to 9203 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
32.7 bits(65) 0.0 12/16(75%) 0/16(0%) Plus/Minus
Query      631  RRIATGINLTDGSPRR  678
                RR ATGIN TDG+P+R
Subject   9156  RRSATGINFTDGTPKR  9203

Range 13: 9246 to 9305 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.3 bits(62) 0.0 13/20(65%) 0/20(0%) Plus/Minus
Query      434  KTLYCTSQAGINLTD*TKRK  493
                KTLYCT   G+ LT *TK+K
Subject   9246  KTLYCTCSTGLILTV*TKQK  9305

Range 14: 118 to 285 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
27.2 bits(53) 0.0 16/56(29%) 0/56(0%) Plus/Minus
Query     1464  KIENALCL*LGKLNTKVRTKNKNPKTHYTYLKENLTRRYSTQRKKNFLFF*LIRKN  1631
                K     C   GKL T         K ++  LKEN  + Y  Q K         RK+
Subject    118  KRREKFCYFKGKLMTTKHETPIREKKNFVILKENYNKNY*RQLKGKIFILFFFRKS  285

Range 15: 9400 to 9504 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.9 bits(107) 0.0 22/35(63%) 0/35(0%) Plus/Minus
Query      240  PNPTLPAL*KSRLLATCWTLTYPDATRKVTTHGVL  344
                PNPTLPA  K RLL TCW L+Y D   KV T G L
Subject   9400  PNPTLPAHLKCRLLVTCWPLSYLDTRLKVATLGAL  9504

Range 16: 9633 to 9740 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.5 bits(106) 0.0 20/36(56%) 0/36(0%) Plus/Minus
Query        4  PHYTCRAQHFQRPFELAAGHLTEATLGQTPKCAHAI  111
                P+ T R  HFQR  E AA HLT+A LG +PKC H +
Subject   9633  PNCTFRT*HFQRSVEPAASHLTDAALGHSPKCMHVL  9740

Range 17: 9528 to 9620 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.9 bits(83) 0.0 20/31(65%) 0/31(0%) Plus/Minus
Query      114  HVRLTW*LRC*T*TLPSSPKDSLDSTAVHDL  206
                H RLT  L+ *T*+LPSSPKD+L+ T VH L
Subject   9528  HARLT*QLQS*T*SLPSSPKDTLN*TPVHRL  9620

Range 18: 9144 to 9209 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.6 bits(56) 0.0 13/22(59%) 0/22(0%) Plus/Minus
Query      555  TRIRSATGIALTDGTRRREN*N  620
                T  RSATGI  TDGT +R   N
Subject   9144  TSRRSATGINFTDGTPKRRRKN  9209

Range 19: 9308 to 9355 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
26.7 bits(52) 0.0 9/16(56%) 0/16(0%) Plus/Minus
Query      389  PHLCTDESRKGTPKEK  436
                PH+ +D+SRKG P+ K
Subject   9308  PHVRSDKSRKGNPRLK  9355

Range 20: 9247 to 9309 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
26.3 bits(51) 0.0 11/21(52%) 0/21(0%) Plus/Minus
Query      430  RKNSLLYKSSRY*PHGLD*TK  492
                +KN LLY   R  PHG++ TK
Subject   9247  KKNPLLYMFHRSYPHGVNKTK  9309

Range 21: 9407 to 9511 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.5 bits(93) 0.0 21/35(60%) 0/35(0%) Plus/Minus
Query      233  TRTEPNTSSALKEQAVGHLLDPNLP*RYEKSHNTW  337
                T+T+ NTSSA   QAVGHLL P LP    KS +TW
Subject   9407  TKTKSNTSSAP*VQAVGHLLAPILPRHKAKSRDTW  9511

Range 22: 9628 to 9735 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.8 bits(85) 0.0 21/36(58%) 0/36(0%) Plus/Minus
Query        9  LYLQSPALSAPF*AGCWTPNRGYPRANAQMRSRNQH  116
                LYLQ  ALSA   AGC +P+R  PRA AQM +R  H
Subject   9628  LYLQDLALSALRRAGC*SPDRRCPRALAQMHARLTH  9735

Range 23: 891 to 1112 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.8 bits(85) 0.0 27/74(36%) 0/74(0%) Plus/Minus
Query      727  MRDRFKRNGLIRTIGNVRRV*PSH*LDFLAVRPNRHTIAAN*GELPSIAVNG*WGKYTLHPLGELTNINVSGAL  948
                +R+ F+ +  IR +G+     P    D L +   R   AA+   LP    N    K TLHP GEL+N+N S AL
Subject    891  IRNSFEYDVEIRHVGSCGS*GPCLHQDLLTIPSQRAD*AADNSVLPCKPFNWWGDKRTLHPFGELSNVNHSCAL  1112

Range 24: 9560 to 9619 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.9 bits(72) 0.0 13/20(65%) 0/20(0%) Plus/Minus
Query      115  MCDLHGSYGAKPKHFRHPPK  174
                M DLH SY  KP   RHPPK
Subject   9560  MHDLHSSYSPKPSRSRHPPK  9619

Range 25: 681 to 827 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
32.7 bits(65) 0.0 18/49(37%) 0/49(0%) Plus/Minus
Query     1012  VTISLIKPVKLQSGVNVRKGELTQNTKTKTKER*ANRTTLNKNRRERNS  1158
                +TI L+ P  LQ  +NVRKGE  Q       E *  +   N+N   R +
Subject    681  ITIGLVVPNVLQGVINVRKGENAQWANVVHSET*KLKRRGNRNNGLRRT  827

Range 26: 9245 to 9334 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.9 bits(59) 0.0 14/30(47%) 0/30(0%) Plus/Minus
Query      405  TKVGRVPQKKKLSTVQVKPVLTSRTRLNEK  494
                ++ G    K+K STV V PVL+SR   N+K
Subject   9245  SRKGNPRLKEKPSTVHVPPVLSSRCEQNKK  9334

Range 27: 9145 to 9201 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.1 bits(55) 0.0 10/19(53%) 0/19(0%) Plus/Minus
Query      563  KKCHWYCPHRWHA*KRKLK  619
                K+CH Y  H WHA*++  K
Subject   9145  KECHRY*LHGWHA*EKTKK  9201

Range 28: 9308 to 9505 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
60.2 bits(125) 0.0 35/66(53%) 0/66(0%) Minus/Plus
Query      239  FFFWGTLPTFVGA*MGRNFLLYLWDDWRYYDSTPCVVTFLVASG*VRVQQVANSLLF*SAGSVGFG  436
                F  W TLPT VGA M    L YL D      S P V TF + S * R QQV NSL    AGSVGFG
Subject   9308  FKSWVTLPTLVGAYMWEFELPYLTDKRHISYSAPSVATFSLVSR*DRGQQVTNSLHLRCAGSVGFG  9505

Range 29: 9629 to 9736 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.9 bits(72) 0.0 20/36(56%) 0/36(0%) Minus/Plus
Query        8  C*LRERIWAFALG*PRLGVQQPAQKGAESAGLCRYS  115
                C  R  IWA ALG  R G  QPA + AESA   RYS
Subject   9629  CVRRACIWASALGQRRSGD*QPALRSAESARS*RYS  9736

Range 30: 911 to 985 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.4 bits(71) 0.0 14/25(56%) 0/25(0%) Minus/Plus
Query      854  YW*AHPRGEACICPITR*RLY*AIR  928
                +W AH RGEA +CP T *R+  A+R
Subject    911  HWKAHQRGEAYVCPPTS*RVCTAVR  985

Range 31: 9514 to 9576 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.4 bits(60) 0.0 13/21(62%) 0/21(0%) Minus/Plus
Query      158  AEHLFRSCTAVESSESLGDDG  220
                A++ FR CT V  S SLGDDG
Subject   9514  AKYPFRRCTGV*FSVSLGDDG  9576

Range 32: 4653 to 4736 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.6 bits(56) 0.0 13/28(46%) 0/28(0%) Minus/Plus
Query      706  SNSSDVSDSTNQAVTFEAVSHSPGCLSY  789
                +N  DV  STN  VT E  +HSP  + Y
Subject   4653  TNVRDVGISTNGEVTGEEETHSPRSVQY  4736

Range 33: 9561 to 9620 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.1 bits(55) 0.0 14/20(70%) 0/20(0%) Minus/Plus
Query      114  FGG*RKCLGLAP*LPCKSHM  173
                FGG*R+ LGL  *L CKS M
Subject   9561  FGG*RERLGLGL*LLCKSCM  9620

Range 34: 9156 to 9203 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
27.2 bits(53) 0.0 12/16(75%) 0/16(0%) Minus/Plus
Query      631  SSRRAICEVNTSGDPS  678
                S RRAI EVNT G PS
Subject   9156  SLRRAIREVNTGGTPS  9203

Range 35: 9312 to 9512 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.2 bits(112) 0.0 31/67(46%) 0/67(0%) Minus/Plus
Query      232  SFGVPFLLSSVHRWGEIFSYIFGTIGAIMIAHHVL*LFS*RQGRLGSNRWPTACSFRALEVLGSVRV  432
                S G+PFLL S    G + S I  T     IA  V  L +  +GR+G+NR PTAC+  ALEVL  V V
Subject   9312  SLGLPFLLLSERTCGSLNSRILRTRDTSAIARQVSRLLALCRGRIGANR*PTACT*GALEVLDLVLV  9512

Range 36: 892 to 1035 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
33.1 bits(66) 0.0 22/48(46%) 0/48(0%) Minus/Plus
Query      804  SAPLTFILVSSPKG*SVYLPHHPLTAILGNSP*LAAMVWRLGRTARKS  947
                SA L F L SSPKG*SV L  H L  + G++   AA   R     R+S
Subject    892  SAQL*FTLESSPKG*SVRLSPHQLKGLHGSTLLSAAQSAR*EGMVRRS  1035

Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome

Sequence ID: KX701860.1 Length: 18020 Number of Matches: 36

Range 1: 274 to 657 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
168.3 bits(361) 0.0 69/128(54%) 0/128(0%) Minus/Plus
Query      700  LRQFSFPHVNSTLEFYRFNKGNSDVNKFIVNLKPAGGAKVVDFSPKCAAYVYIGKLTQGVKRVFAPSPVNGYTRQFALVSGNGVAVRADGEKVKLVARSNSSDVSDSTNQAVTFEAVSHSPGCLSYYK  1083
                LR FSFPHVN+TLE+ R+NK NSDV  F+  +K AG  K+ DF+PK AA +YIGKLT+GVKR F P PV G+ RQ+A+VSG   A+R DG+KV + AR+++S VSD+++    FEAV+H+   + Y++
Subject    274  LRVFSFPHVNNTLEYIRYNKANSDVGAFLTAMKFAGNVKLSDFTPKSAALIYIGKLTKGVKRTFVPPPVKGFARQYAVVSGTVSALRGDGKKVLMEARTSTSAVSDASSYDAVFEAVTHALIVVHYHR  657

Range 2: 8831 to 9019 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.9 bits(155) 0.0 32/63(51%) 0/63(0%) Minus/Plus
Query      243  LLGYPSYFRRCIDGEKFSPISLGRLALL**HTMCCDFSRSVRVG*GPTGGQQPALLERWKCWV  431
                +LGYPSY  R      ++P+S G+     *   C DF   V+VG*GPTG QQPAL  RWKCW+
Subject   8831  VLGYPSYSCRSAYAGVYTPVSYGQETHQL*RARCRDF*PCVKVG*GPTGDQQPALKVRWKCWI  9019

Range 3: 8994 to 9140 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.9 bits(120) 0.0 29/49(59%) 0/49(0%) Minus/Plus
Query      112  LEVLGSVRVHVSWPNICLGRVQQ*SLASLWGMTEVFRFSTVATM*VAHA  258
                L+  GSV   +S PNI LG VQ  SL  LWGMT   RF TVA M*V HA
Subject   8994  LKCAGSVGFGLSVPNILLGDVQVFSLVCLWGMTGATRFRTVAAM*VVHA  9140

Range 4: 9164 to 9250 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.9 bits(83) 0.0 19/29(66%) 0/29(0%) Minus/Plus
Query       12  HLGVCPRVASVRCPAASSKGR*KCWALQV  98
                HLG  PR ASVRC AA S  R*KC  L+V
Subject   9164  HLGGSPRAASVRCLAAGSTER*KC*VLKV  9250

Range 5: 8641 to 8721 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.0 bits(57) 0.0 15/27(56%) 0/27(0%) Minus/Plus
Query      631  SYYKS*IPLLRSSRRAICEVNTSGDPS  711
                SY      L  S RRAI EVNT G PS
Subject   8641  SYLSQSSSLSSSLRRAIREVNTGGTPS  8721

Range 6: 8763 to 8825 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.8 bits(50) 0.0 12/21(57%) 0/21(0%) Minus/Plus
Query      432  FFV*SSP*G*YRLDLYSREFF  494
                F V  +P*G* R ++YSR FF
Subject   8763  FLVLFTP*G*DRWNMYSRAFF  8825

Range 7: 276 to 623 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.2 bits(208) 0.0 58/116(50%) 0/116(0%) Plus/Minus
Query      734  TASNVTA*FVLSETSDEFDLATNLTFSPSALTATPLPLTKANCLV*PLTGDGANTRFTPWVSLPI*T*AAHFGEKSTTLAPPAGLRLTMNLLTSLFPLLNR*NSKVELT*GKEN*R  1081
                TASN  +*   SET++   LA+  TF PS L A  +PLT A C   PLTG G N RFTP VSLPI   AA  G KS     PA         TSL  LL    SKV LT*GKE  R
Subject    276  TASNTAS*LDASETAEVEVLASIKTFLPSPLNALTVPLTTAYCRANPLTGGGTNVRFTPLVSLPIYMRAALLGVKSDNFTFPANFMAVRKAPTSLLALLYLMYSKVLLT*GKEKTR  623

Range 8: 9005 to 9142 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.7 bits(124) 0.0 26/46(57%) 0/46(0%) Plus/Minus
Query      110  SACATYMVATVLNLNTSVIPQRLARLYCCTRPKQMFGQLTCTRTEP  247
                +AC TYM ATVLNL   VIPQR  +L  CT PK++FG L    T P
Subject   9005  AACTTYMAATVLNLVAPVIPQRHTKLNTCTSPKRIFGTLRPNPTLP  9142

Range 9: 8884 to 9024 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.9 bits(120) 0.0 24/47(51%) 0/47(0%) Plus/Minus
Query      238  NRTQHFQRSKRAGCWPPVGP*PTLTLREKSQHMVCYHNSANRPKDIG  378
                ++ QHFQR+  AGCW PVGP PTLT   KS+H+  Y    + P D G
Subject   8884  DQIQHFQRTLSAGCWSPVGPYPTLTQG*KSRHLARYS*CVSCP*DTG  9024

Range 10: 9147 to 9257 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.1 bits(114) 0.0 26/37(70%) 0/37(0%) Plus/Minus
Query        5  PTIPAEPSTFSALLSWLLDT*PRLP*GKRPNALTQSA  115
                PT+P+ PSTFSA  S LLDT*P LP*G RPNA T  A
Subject   9147  PTVPSGPSTFSAP*SRLLDT*PMLP*GFRPNACTSYA  9257

Range 11: 8665 to 8721 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.3 bits(73) 0.0 15/19(79%) 0/19(0%) Plus/Minus
Query      631  RRIATGINLTDGSPRRP*Q  687
                RR ATGINLTDG+P+R *Q
Subject   8665  RRSATGINLTDGTPKRR*Q  8721

Range 12: 8764 to 8823 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.3 bits(62) 0.0 12/20(60%) 0/20(0%) Plus/Minus
Query      434  KTLYCTSQAGINLTD*TKRK  493
                KTLYCT   G++LT *TK++
Subject   8764  KTLYCTCSTGLSLTV*TKQE  8823

Range 13: 8835 to 8873 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.4 bits(49) 0.0 8/13(62%) 0/13(0%) Plus/Minus
Query      389  PHLCTDESRKGTP  427
                PH+ +D+SRKG P
Subject   8835  PHMRSDKSRKGNP  8873

Range 14: 8918 to 9022 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.4 bits(108) 0.0 22/35(63%) 0/35(0%) Plus/Minus
Query      240  PNPTLPAL*KSRLLATCWTLTYPDATRKVTTHGVL  344
                PNPTLPA  K RLL TCW L+Y D   KV T G L
Subject   8918  PNPTLPAHFKCRLLVTCWPLSYLDTRLKVATPGAL  9022

Range 15: 9151 to 9258 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 20/36(56%) 0/36(0%) Plus/Minus
Query        4  PHYTCRAQHFQRPFELAAGHLTEATLGQTPKCAHAI  111
                P+ T R  HFQR  E AA HLT+A LG  PKC H +
Subject   9151  PNCTFRT*HFQRSVEPAARHLTDAALGLPPKCMHVL  9258

Range 16: 9046 to 9138 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.3 bits(99) 0.0 21/31(68%) 0/31(0%) Plus/Minus
Query      114  HVRLTW*LRC*T*TLPSSPKDSLDSTAVHDL  206
                H RLTW L+ *T*+LPSSPKD+L+ T VH L
Subject   9046  HARLTWQLQS*T*SLPSSPKDTLN*TPVHHL  9138

Range 17: 8651 to 8719 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.1 bits(68) 0.0 12/23(52%) 0/23(0%) Plus/Minus
Query      563  KKCHWYCPHRWHA*KRKLKPKTK  631
                K+CH Y PH WHA*++    KT+
Subject   8651  KECHRY*PHGWHA*EKMTNWKTE  8719

Range 18: 8762 to 8827 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.4 bits(60) 0.0 12/22(55%) 0/22(0%) Plus/Minus
Query      430  RKNSLLYKSSRY*PHGLD*TKK  495
                +KN+LLY   R *PHG++ T+K
Subject   8762  KKNALLYMFHRS*PHGVNKTRK  8827

Range 19: 8825 to 8869 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.5 bits(45) 0.0 10/15(67%) 0/15(0%) Plus/Minus
Query      393  IYAPTKVGRVPQKKK  437
                I APT+VGRV Q  K
Subject   8825  ICAPTRVGRVTQDLK  8869

Range 20: 8826 to 9023 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.8 bits(133) 0.0 36/66(55%) 0/66(0%) Minus/Plus
Query      239  FFFWGTLPTFVGA*MGRNFLLYLWDDWRYYDSTPCVVTFLVASG*VRVQQVANSLLF*SAGSVGFG  436
                F  W TLPT VGA M    LLYL D      S P V TF + S * R QQV NSL    AGSVGFG
Subject   8826  FKSWVTLPTLVGAHMREFILLYLTDKRHISYSAPGVATFSLVSR*DRGQQVTNSLHLKCAGSVGFG  9023

Range 21: 9147 to 9260 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
39.6 bits(80) 0.0 22/38(58%) 0/38(0%) Minus/Plus
Query        2  C*LRERIWAFALG*PRLGVQQPAQKGAESAGLCRYSGV  115
                C  R  IWA ALG  R GV QPA + AESA   RYS V
Subject   9147  CVRRACIWAEALGQHRSGV*QPALRSAESARS*RYSWV  9260

Range 22: 416 to 523 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
39.1 bits(79) 0.0 19/36(53%) 0/36(0%) Minus/Plus
Query      834  PLTFILVSSPKG*SVYLPHHPLTAILGNSP*LAAMV  941
                PL++ILVSSPKG*S     H L  + GN+P  AA +
Subject    416  PLSYILVSSPKG*SGRSSPHQLKGLRGNTPL*AAQL  523

Range 23: 8624 to 8722 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.6 bits(78) 0.0 18/33(55%) 0/33(0%) Minus/Plus
Query      630  ILPGVYRTINHESLCYGLLGEPSVRLIPVAILL  728
                ++P   RT     +C+ LLG PSVRLIPVA+LL
Subject   8624  LIPKGRRTYLSLPVCHLLLGVPSVRLIPVALLL  8722

Range 24: 9079 to 9138 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
32.7 bits(65) 0.0 15/20(75%) 0/20(0%) Minus/Plus
Query      114  FGG*RKCLGLAP*LPCKSHM  173
                FGG*R+ LGL  *LPCKS M
Subject   9079  FGG*RERLGLGL*LPCKSCM  9138

Range 25: 9032 to 9094 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.8 bits(63) 0.0 13/21(62%) 0/21(0%) Minus/Plus
Query      158  AEHLFRSCTAVESSESLGDDG  220
                A++ FR CT V+ S SLGDDG
Subject   9032  AKYPFR*CTGVQFSVSLGDDG  9094

Range 26: 4171 to 4254 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.4 bits(49) 0.0 12/28(43%) 0/28(0%) Minus/Plus
Query      706  SNSSDVSDSTNQAVTFEAVSHSPGCLSY  789
                +N  DV  STN  V  E  +HSP  + Y
Subject   4171  TNVCDVGISTNGEVVGEEETHSPRSVLY  4254

Range 27: 8925 to 9026 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 22/34(65%) 0/34(0%) Plus/Minus
Query      236  RTEPNTSSALKEQAVGHLLDPNLP*RYEKSHNTW  337
                +T+ NTSSAL  QAVGHLL P LP*   KS +TW
Subject   8925  KTKSNTSSAL*VQAVGHLLAPILP*HKAKSRDTW  9026

Range 28: 9146 to 9259 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.9 bits(96) 0.0 23/38(61%) 0/38(0%) Plus/Minus
Query        3  TPLYLQSPALSAPF*AGCWTPNRGYPRANAQMRSRNQH  116
                T LYLQ  ALSA   AGC TP+R  PRA+AQM +R  H
Subject   9146  TQLYLQDLALSALRRAGC*TPDRCCPRASAQMHARLTH  9259

Range 29: 409 to 633 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
42.8 bits(87) 0.0 28/75(37%) 0/75(0%) Plus/Minus
Query      724  RMRDRFKRNGLIRTIGNVRRV*PSH*LDFLAVRPNRHTIAAN*GELPSIAVNG*WGKYTLHPLGELTNINVSGAL  948
                RM   FK   + R +GN R   P    + L +       AA+ G LP    N    +  LHP GELTNI  SG L
Subject    409  RMCYSFKYGVVTRRVGNCRS*GPRLHQNLLTIPSQCTNCAAHNGVLPRKPFNWWGDERPLHPFGELTNIYESGTL  633

Range 30: 9078 to 9137 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.6 bits(78) 0.0 14/20(70%) 0/20(0%) Plus/Minus
Query      115  MCDLHGSYGAKPKHFRHPPK  174
                M DLHGSY  KP   RHPPK
Subject   9078  MHDLHGSYSPKPSRSRHPPK  9137

Range 31: 8630 to 8734 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.4 bits(60) 0.0 15/35(43%) 0/35(0%) Plus/Minus
Query      618  NLKLKKDRHWY*PHRWLA*KTVTKGFMIYSTINTR  722
                N   KK+ H Y*PH W A*+ +T      ST   R
Subject   8630  NTHFKKECHRY*PHGWHA*EKMTNWKTEISTTTLR  8734

Range 32: 8763 to 8852 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.9 bits(59) 0.0 14/30(47%) 0/30(0%) Plus/Minus
Query      405  TKVGRVPQKKKLSTVQVKPVLTSRTRLNEK  494
                ++ G    K+K STV V PVL SR   N+K
Subject   8763  SRKGNPGLKEKRSTVHVPPVLASRCEQNKK  8852

Range 33: 268 to 345 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.6 bits(56) 0.0 12/26(46%) 0/26(0%) Plus/Minus
Query     1012  VTISLIKPVKLQSGVNVRKGELTQNT  1089
                + ISL+ P  LQ  +++RKGE  Q T
Subject    268  IAISLVVPNVLQGIIDMRKGENAQRT  345

Range 34: 8836 to 9024 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.6 bits(115) 0.0 30/63(48%) 0/63(0%) Minus/Plus
Query      238  GVPFLLSSVHRWGEIFSYIFGTIGAIMIAHHVL*LFS*RQGRLGSNRWPTACSFRALEVLGSV  426
                G+PFLL S    G ++S I  T     IA  V  L +  QGR+G+NR PTAC+  ALEVL  V
Subject   8836  GLPFLLLSERICGSLYSCILRTRDTSAIARQVSRLLALCQGRIGANR*PTACT*SALEVLDLV  9024

Range 35: 429 to 503 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.5 bits(69) 0.0 16/25(64%) 0/25(0%) Minus/Plus
Query      854  YW*AHPRGEACICPITR*RLY*AIR  928
                YW*AH RGEA + P T *R+  AIR
Subject    429  YW*AHQRGEADVRPPTS*RVCAAIR  503

Range 36: 8682 to 8714 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.9 bits(48) 0.0 8/11(73%) 0/11(0%) Minus/Plus
Query      568  ACHL*GQYQWH  600
                ACH *G Y+WH
Subject   8682  ACHP*G*YRWH  8714

Grapevine leafroll associated virus 3 isolate 623, complete genome

Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 38

Range 1: 756 to 1139 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
165.1 bits(354) 0.0 67/128(52%) 0/128(0%) Minus/Plus
Query      700  LRQFSFPHVNSTLEFYRFNKGNSDVNKFIVNLKPAGGAKVVDFSPKCAAYVYIGKLTQGVKRVFAPSPVNGYTRQFALVSGNGVAVRADGEKVKLVARSNSSDVSDSTNQAVTFEAVSHSPGCLSYYK  1083
                LR FSFPHVN+TLE+ R+NK NSDV  F+ ++K  G  K+ DF+PK AA +YIGKLT+GVKR F P PV G+ RQ+A+VSG   A+R DG+KV + AR+++S  SD+++    FEAV+H+   + Y++
Subject    756  LRVFSFPHVNNTLEYIRYNKANSDVGAFLTSMKFTGNVKLSDFTPKSAALIYIGKLTKGVKRTFVPPPVKGFARQYAVVSGTVSALRGDGKKVLMEARTSTSASSDASSYDAVFEAVTHALIVVHYHR  1139

Range 2: 9313 to 9501 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.0 bits(140) 0.0 30/63(48%) 0/63(0%) Minus/Plus
Query      243  LLGYPSYFRRCIDGEKFSPISLGRLALL**HTMCCDFSRSVRVG*GPTGGQQPALLERWKCWV  431
                +LGY SY  R      ++P+S G+     *   C DF   V+VG GPTG QQPAL  RWKCW+
Subject   9313  VLGYLSYSCRSAYAGVYTPVSYGQETHQL*RARCRDF*PCVKVGWGPTGDQQPALKVRWKCWI  9501

Range 3: 9476 to 9622 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.9 bits(120) 0.0 29/49(59%) 0/49(0%) Minus/Plus
Query      112  LEVLGSVRVHVSWPNICLGRVQQ*SLASLWGMTEVFRFSTVATM*VAHA  258
                L+  GSV   +S PNI LG VQ  SL  LWGMT   RF TVA M*V HA
Subject   9476  LKCAGSVGFGLSVPNILLGDVQVFSLVCLWGMTGATRFRTVAAM*VVHA  9622

Range 4: 9646 to 9732 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.9 bits(83) 0.0 19/29(66%) 0/29(0%) Minus/Plus
Query       12  HLGVCPRVASVRCPAASSKGR*KCWALQV  98
                HLG  PR ASVRC AA S  R*KC  L+V
Subject   9646  HLGGSPRAASVRCLAAGSTER*KC*VLKV  9732

Range 5: 78 to 173 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.4 bits(60) 0.0 15/32(47%) 0/32(0%) Minus/Plus
Query     1639  FSFYLGCFWV*LLSFLYFKNQKIFSSSRVLFS  1734
                F FY  CFWV  LSF   K +  F  S V+ S
Subject     78  FVFYFSCFWVLRLSFS*TKTKVNFFFSAVVSS  173

Range 6: 9123 to 9203 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.9 bits(59) 0.0 15/27(56%) 0/27(0%) Minus/Plus
Query      631  SYYKS*IPLLRSSRRAICEVNTSGDPS  711
                SY      L  S RRAI EVNT G PS
Subject   9123  SYLSQSFSLSSSLRRAIREVNTGGTPS  9203

Range 7: 9245 to 9328 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
26.7 bits(52) 0.0 12/28(43%) 0/28(0%) Minus/Plus
Query      411  FFV*SSP*G*YRLDLYSREFFLLGYPSY  494
                F V  +P*G* R ++YSR FF   + ++
Subject   9245  FLVLFTP*G*DRWNMYSRAFFFKSWVTF  9328

Range 8: 758 to 1105 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.3 bits(195) 0.0 56/116(48%) 0/116(0%) Plus/Minus
Query      734  TASNVTA*FVLSETSDEFDLATNLTFSPSALTATPLPLTKANCLV*PLTGDGANTRFTPWVSLPI*T*AAHFGEKSTTLAPPAGLRLTMNLLTSLFPLLNR*NSKVELT*GKEN*R  1081
                TASN  +*   SE ++   LA+  TF PS L A  +PLT A C   PLTG G N RFTP VSLPI   AA  G KS     P          TSL  LL    SKV LT*GKE  R
Subject    758  TASNTAS*LDASEDAEVEVLASIKTFLPSPLNALTVPLTTAYCRANPLTGGGTNVRFTPLVSLPIYMRAALLGVKSDNFTFPVNFMDVRKAPTSLLALLYLMYSKVLLT*GKEKTR  1105

Range 9: 9487 to 9624 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.7 bits(124) 0.0 26/46(57%) 0/46(0%) Plus/Minus
Query      110  SACATYMVATVLNLNTSVIPQRLARLYCCTRPKQMFGQLTCTRTEP  247
                +AC TYM ATVLNL   VIPQR  +L  CT PK++FG L    T P
Subject   9487  AACTTYMAATVLNLVAPVIPQRHTKLNTCTSPKRIFGTLRPNPTLP  9624

Range 10: 9366 to 9506 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.9 bits(120) 0.0 24/47(51%) 0/47(0%) Plus/Minus
Query      238  NRTQHFQRSKRAGCWPPVGP*PTLTLREKSQHMVCYHNSANRPKDIG  378
                ++ QHFQR+  AGCW PVGP PTLT   KS+H+  Y    + P D G
Subject   9366  DQIQHFQRTLSAGCWSPVGPHPTLTQG*KSRHLARYS*CVSCP*DTG  9506

Range 11: 9629 to 9739 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.1 bits(114) 0.0 26/37(70%) 0/37(0%) Plus/Minus
Query        5  PTIPAEPSTFSALLSWLLDT*PRLP*GKRPNALTQSA  115
                PT+P+ PSTFSA  S LLDT*P LP*G RPNA T  A
Subject   9629  PTVPSGPSTFSAP*SRLLDT*PMLP*GFRPNACTSYA  9739

Range 12: 9141 to 9203 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.8 bits(74) 0.0 15/21(71%) 0/21(0%) Plus/Minus
Query      631  RRIATGINLTDGSPRRP*QRD  693
                RR ATGINLTDG+P+R *Q +
Subject   9141  RRSATGINLTDGTPKRR*QTE  9203

Range 13: 118 to 255 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.8 bits(63) 0.0 17/46(37%) 0/46(0%) Plus/Minus
Query     1494  GKLNTKVRTKNKNPKTHYTYLKENLTRRYSTQRKKNFLFF*LIRKN  1631
                GKL    R   K  +  +   KEN  R Y  Q K+  L   L RKN
Subject    118  GKLKMTRRDVLKGEEIFFVIFKENYNRNY*QQLKRKNLLLFLFRKN  255

Range 14: 9246 to 9305 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.3 bits(62) 0.0 12/20(60%) 0/20(0%) Plus/Minus
Query      434  KTLYCTSQAGINLTD*TKRK  493
                KTLYCT   G++LT *TK++
Subject   9246  KTLYCTCSTGLSLTV*TKQE  9305

Range 15: 255 to 350 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
26.7 bits(52) 0.0 13/32(41%) 0/32(0%) Plus/Minus
Query     1273  KRRSYLQEKEGYITNTNSKLKDKHEFNLNRRK  1368
                KR + L+   G     N+K + K + NLNRRK
Subject    255  KRTNPLKRHLGKTKTKNTKTQRKLDANLNRRK  350

Range 16: 9317 to 9355 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.4 bits(49) 0.0 8/13(62%) 0/13(0%) Plus/Minus
Query      389  PHLCTDESRKGTP  427
                PH+ +D+SRKG P
Subject   9317  PHMRSDKSRKGNP  9355

Range 17: 9400 to 9504 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.2 bits(101) 0.0 21/35(60%) 0/35(0%) Plus/Minus
Query      240  PNPTLPAL*KSRLLATCWTLTYPDATRKVTTHGVL  344
                PNPTLPA  K RLL TCW  +Y D   KV T G L
Subject   9400  PNPTLPAHFKCRLLVTCWPPSYLDTRLKVATPGAL  9504

Range 18: 9633 to 9740 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 20/36(56%) 0/36(0%) Plus/Minus
Query        4  PHYTCRAQHFQRPFELAAGHLTEATLGQTPKCAHAI  111
                P+ T R  HFQR  E AA HLT+A LG  PKC H +
Subject   9633  PNCTFRT*HFQRSVEPAARHLTDAALGLPPKCMHVL  9740

Range 19: 9528 to 9620 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.3 bits(99) 0.0 21/31(68%) 0/31(0%) Plus/Minus
Query      114  HVRLTW*LRC*T*TLPSSPKDSLDSTAVHDL  206
                H RLTW L+ *T*+LPSSPKD+L+ T VH L
Subject   9528  HARLTWQLQS*T*SLPSSPKDTLN*TPVHHL  9620

Range 20: 9133 to 9201 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.1 bits(68) 0.0 12/23(52%) 0/23(0%) Plus/Minus
Query      563  KKCHWYCPHRWHA*KRKLKPKTK  631
                K+CH Y PH WHA*++    KT+
Subject   9133  KECHRY*PHGWHA*EKMTN*KTE  9201

Range 21: 9244 to 9309 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.4 bits(60) 0.0 12/22(55%) 0/22(0%) Plus/Minus
Query      430  RKNSLLYKSSRY*PHGLD*TKK  495
                +KN+LLY   R *PHG++ T+K
Subject   9244  KKNALLYMFHRS*PHGVNKTRK  9309

Range 22: 9308 to 9505 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.8 bits(122) 0.0 34/66(52%) 0/66(0%) Minus/Plus
Query      239  FFFWGTLPTFVGA*MGRNFLLYLWDDWRYYDSTPCVVTFLVASG*VRVQQVANSLLF*SAGSVGFG  436
                F  W T PT VGA M    LLYL D      S P V TF + S *   QQV NSL    AGSVGFG
Subject   9308  FKSWVTFPTLVGAHMREFILLYLTDKRHISYSAPGVATFSLVSR*DGGQQVTNSLHLKCAGSVGFG  9505

Range 23: 898 to 1005 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.9 bits(83) 0.0 20/36(56%) 0/36(0%) Minus/Plus
Query      834  PLTFILVSSPKG*SVYLPHHPLTAILGNSP*LAAMV  941
                PL++ILVSSPKG*S  L  H L  + GN P  AA +
Subject    898  PLSYILVSSPKG*SGRLSPHQLKGLRGNMPL*AAQL  1005

Range 24: 9106 to 9204 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.9 bits(83) 0.0 19/33(58%) 0/33(0%) Minus/Plus
Query      630  ILPGVYRTINHESLCYGLLGEPSVRLIPVAILL  728
                ++P   RT    S+C+ LLG PSVRLIPVA+LL
Subject   9106  LIPKGRRTYLSLSVCHLLLGVPSVRLIPVALLL  9204

Range 25: 9629 to 9742 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
39.6 bits(80) 0.0 22/38(58%) 0/38(0%) Minus/Plus
Query        2  C*LRERIWAFALG*PRLGVQQPAQKGAESAGLCRYSGV  115
                C  R  IWA ALG  R GV QPA + AESA   RYS V
Subject   9629  CVRRACIWAEALGQHRSGV*QPALRSAESARS*RYSWV  9742

Range 26: 9561 to 9620 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
32.7 bits(65) 0.0 15/20(75%) 0/20(0%) Minus/Plus
Query      114  FGG*RKCLGLAP*LPCKSHM  173
                FGG*R+ LGL  *LPCKS M
Subject   9561  FGG*RERLGLGL*LPCKSCM  9620

Range 27: 9514 to 9576 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.8 bits(63) 0.0 13/21(62%) 0/21(0%) Minus/Plus
Query      158  AEHLFRSCTAVESSESLGDDG  220
                A++ FR CT V+ S SLGDDG
Subject   9514  AKYPFR*CTGVQFSVSLGDDG  9576

Range 28: 4653 to 4736 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.4 bits(49) 0.0 12/28(43%) 0/28(0%) Minus/Plus
Query      706  SNSSDVSDSTNQAVTFEAVSHSPGCLSY  789
                +N  DV  STN  V  E  +HSP  + Y
Subject   4653  TNVRDVGISTNGEVVGEEETHSPRSVLY  4736

Range 29: 9407 to 9508 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 22/34(65%) 0/34(0%) Plus/Minus
Query      236  RTEPNTSSALKEQAVGHLLDPNLP*RYEKSHNTW  337
                +T+ NTSSAL  QAVGHLL P LP*   KS +TW
Subject   9407  KTKSNTSSAL*VQAVGHLLAPILP*HKAKSRDTW  9508

Range 30: 9628 to 9741 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.9 bits(96) 0.0 23/38(61%) 0/38(0%) Plus/Minus
Query        3  TPLYLQSPALSAPF*AGCWTPNRGYPRANAQMRSRNQH  116
                T LYLQ  ALSA   AGC TP+R  PRA+AQM +R  H
Subject   9628  TQLYLQDLALSALRRAGC*TPDRCCPRASAQMHARLTH  9741

Range 31: 9560 to 9619 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.6 bits(78) 0.0 14/20(70%) 0/20(0%) Plus/Minus
Query      115  MCDLHGSYGAKPKHFRHPPK  174
                M DLHGSY  KP   RHPPK
Subject   9560  MHDLHGSYSPKPSRSRHPPK  9619

Range 32: 9245 to 9334 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.9 bits(59) 0.0 14/30(47%) 0/30(0%) Plus/Minus
Query      405  TKVGRVPQKKKLSTVQVKPVLTSRTRLNEK  494
                ++ G    K+K STV V PVL SR   N+K
Subject   9245  SRKGNPGLKEKRSTVHVPPVLASRCEQNKK  9334

Range 33: 9156 to 9209 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.5 bits(58) 0.0 13/18(72%) 0/18(0%) Plus/Minus
Query      555  TRIRSATGIALTDGTRRR  608
                T  RSATGI LTDGT +R
Subject   9156  TSRRSATGINLTDGTPKR  9209

Range 34: 9318 to 9506 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.6 bits(115) 0.0 30/63(48%) 0/63(0%) Minus/Plus
Query      238  GVPFLLSSVHRWGEIFSYIFGTIGAIMIAHHVL*LFS*RQGRLGSNRWPTACSFRALEVLGSV  426
                G+PFLL S    G ++S I  T     IA  V  L +  QGR+G+NR PTAC+  ALEVL  V
Subject   9318  GLPFLLLSERICGSLYSCILRTRDTSAIARQVSRLLALCQGRMGANR*PTACT*SALEVLDLV  9506

Range 35: 911 to 982 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.7 bits(76) 0.0 16/24(67%) 0/24(0%) Minus/Plus
Query      857  YW*AHPRGEACICPITR*RLY*AI  928
                YW*AH RGEA +CP T *R+  AI
Subject    911  YW*AHQRGEADVCPPTS*RVCAAI  982

Range 36: 9164 to 9196 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.9 bits(48) 0.0 8/11(73%) 0/11(0%) Minus/Plus
Query      568  ACHL*GQYQWH  600
                ACH *G Y+WH
Subject   9164  ACHP*G*YRWH  9196

Range 37: 891 to 1115 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.4 bits(84) 0.0 28/75(37%) 0/75(0%) Plus/Minus
Query      724  RMRDRFKRNGLIRTIGNVRRV*PSH*LDFLAVRPNRHTIAAN*GELPSIAVNG*WGKYTLHPLGELTNINVSGAL  948
                RM   FK   + R +G  R   P    + L +       AA+ G LP    N    K  LHP GELTNI  SG L
Subject    891  RMCYSFKYGVVTRRVGRCRS*GPRLHQNLLTIPSQCTNCAAHNGILPRKPFNWWGDKRPLHPFGELTNIYESGTL  1115

Range 38: 750 to 827 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.6 bits(56) 0.0 12/26(46%) 0/26(0%) Plus/Minus
Query     1012  VTISLIKPVKLQSGVNVRKGELTQNT  1089
                + ISL+ P  LQ  +++RKGE  Q T
Subject    750  IAISLVVPNVLQGIIDMRKGENAQRT  827

Nucleotide Sequence (293 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
30
60
90
120
150
180
210
240
270
293

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
234.3 1183.1 33% 3.344e-60 87% JX559645.1
234.3 1164.8 33% 3.344e-60 85% NC_004667.1
234.3 1313.2 28% 3.344e-60 100% KJ174518.1
234.3 1164.8 33% 3.344e-60 85% AF037268.2
234.3 1183.1 33% 3.344e-60 87% GQ352631.1

Alignments

Grapevine leafroll associated virus 3 isolate 3138 07, complete genome

Sequence ID: JX559645.1 Length: 18498 Number of Matches: 6

Range 1: 6783 to 7073 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
234.3 bits(505) 0.0 97/97(100%) 0/97(0%) Plus/Plus
Query        3  QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP  293
                QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP
Subject   6783  QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP  7073

Range 2: 6783 to 7073 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
200.4 bits(431) 0.0 86/97(89%) 0/97(0%) Minus/Minus
Query        3  WPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQQVANV*RTSV*FRSVYNTFLLWNKYSTIHPKHLLPVYEWYLIYVSKKEAFRRASREDA*L**AL  293
                WPFGQ S+Y  ILT NDLFRVTLFRSPYGH*GQQVAN+*RT V*FRSVYN FLLWNK STIHPKHLLPVYEWYLIYVSKKEAFRRA  EDA*L**AL
Subject   6783  WPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**AL  7073

Range 3: 6781 to 7071 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
198.6 bits(427) 0.0 84/97(87%) 0/97(0%) Minus/Minus
Query        1  AFWTVISLPAYPYH*RPFQGNTFPFPLRSLRTTSSKRLTDICMI*KCIQHFPSLEQIQHNPS*TPSPCL*MVSDLCLQKRGLQTRQSRRRLIVVSLD  291
                AFWT I L  YPY *RPFQGNTFPFPLRSLRTTSSK LTD CMI*KCIQ FPSLEQ QHNPS*TPSPCL*MVSDLCLQKRGL TR+ RRRL+VVSLD
Subject   6781  AFWTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLD  7071

Range 4: 6781 to 7071 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
195.8 bits(421) 0.0 86/97(89%) 0/97(0%) Plus/Plus
Query        1  IKAYYN*ASSRLARLKASFLET*IRYHS*TGRRCLGWIVLYLFQRRKVLYTLLNHTDVR*TFATCCPQ*P*GERKSVTLKRSLVVRISR**DHCPKG  291
                IKAYYN*ASS+ AR KASFLET*IRYHS*TGRRCLGWIVL+LFQRRK LYTLLNHT VR* FATCCPQ*P*GERKSVTLKRSL VRI++**D CPKG
Subject   6781  IKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKG  7071

Range 5: 6782 to 7021 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
183.4 bits(394) 0.0 78/80(98%) 0/80(0%) Minus/Minus
Query        2  FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTNTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPNCSKP*  241
                FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGT TAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTP+CSKP*
Subject   6782  FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*  7021

Range 6: 6782 to 7072 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
170.6 bits(366) 0.0 84/97(87%) 0/97(0%) Plus/Plus
Query        2  SRLTTIRRLRDWRV*RPLFWRHKSDTIHKQGEGV*DGLCCICSKEGKCCIHF*IIQMSXXXXXXXXXNDRKGNGKVLP*KGR*W*G*AGSEITVQKA  292
                SRLTT RRLR+ RV RPLFWRHKSDTIHKQGEGV*DGLCC CSKEGK CIHF*IIQ+SVR LLLVVLNDRKGNGKVLP*KGR* *G*  S+I VQKA
Subject   6782  SRLTTTRRLRNRRVGRPLFWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKA  7072

Grapevine leafroll associated virus 3, complete genome

Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 6

Range 1: 6204 to 6494 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
234.3 bits(505) 0.0 97/97(100%) 0/97(0%) Plus/Plus
Query        3  QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP  293
                QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP
Subject   6204  QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP  6494

Range 2: 6204 to 6494 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
197.6 bits(425) 0.0 84/97(87%) 0/97(0%) Minus/Minus
Query        3  WPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQQVANV*RTSV*FRSVYNTFLLWNKYSTIHPKHLLPVYEWYLIYVSKKEAFRRASREDA*L**AL  293
                WPFGQ S+Y  +LT NDLFRVTLFRSPYGH*GQQVAN+*RT V FRSVYN FLLWNK STIHPKHLLPVYEWYLIYVSKKEAFRRA  EDA*L**AL
Subject   6204  WPFGQRSYYWFVLTANDLFRVTLFRSPYGH*GQQVANI*RTPVRFRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**AL  6494

Range 3: 6202 to 6492 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
191.7 bits(412) 0.0 82/97(85%) 0/97(0%) Minus/Minus
Query        1  AFWTVISLPAYPYH*RPFQGNTFPFPLRSLRTTSSKRLTDICMI*KCIQHFPSLEQIQHNPS*TPSPCL*MVSDLCLQKRGLQTRQSRRRLIVVSLD  291
                AFWT I L   PY *RPFQGNTFPFPLRSLRTTSSK LTD C I*KCIQ FPSLEQ QHNPS*TPSPCL*MVSDLCLQKRGL TR+ RRRL+VVSLD
Subject   6202  AFWTAILLLVCPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCTI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLD  6492

Range 4: 6202 to 6492 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
189.8 bits(408) 0.0 84/97(87%) 0/97(0%) Plus/Plus
Query        1  IKAYYN*ASSRLARLKASFLET*IRYHS*TGRRCLGWIVLYLFQRRKVLYTLLNHTDVR*TFATCCPQ*P*GERKSVTLKRSLVVRISR**DHCPKG  291
                IKAYYN*ASS+ AR KASFLET*IRYHS*TGRRCLGWIVL+LFQRRK LYTLLN T VR* FATCCPQ*P*GERKSVTLKRSL VR ++**D CPKG
Subject   6202  IKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNRTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRTNQ**DRCPKG  6492

Range 5: 6203 to 6442 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
183.4 bits(394) 0.0 78/80(98%) 0/80(0%) Minus/Minus
Query        2  FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTNTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPNCSKP*  241
                FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGT TAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTP+CSKP*
Subject   6203  FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*  6442

Range 6: 6203 to 6493 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
167.9 bits(360) 0.0 82/97(85%) 0/97(0%) Plus/Plus
Query        2  SRLTTIRRLRDWRV*RPLFWRHKSDTIHKQGEGV*DGLCCICSKEGKCCIHF*IIQMSXXXXXXXXXNDRKGNGKVLP*KGR*W*G*AGSEITVQKA  292
                SRLTT RRLR+ RV RPLFWRHKSDTIHKQGEGV*DGLCC CSKEGK CIHF*I+Q+SVR LLLVVLNDRKGNGKVLP*KGR* *G   S+I VQKA
Subject   6203  SRLTTTRRLRNRRVGRPLFWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IVQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*GQTSSKIAVQKA  6493

Grapevine leafroll associated virus 3, complete genome

Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 6

Range 1: 6783 to 7073 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
234.3 bits(505) 0.0 97/97(100%) 0/97(0%) Plus/Plus
Query        3  QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP  293
                QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP
Subject   6783  QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP  7073

Range 2: 6781 to 7071 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
232.5 bits(501) 0.0 97/97(100%) 0/97(0%) Minus/Minus
Query        1  AFWTVISLPAYPYH*RPFQGNTFPFPLRSLRTTSSKRLTDICMI*KCIQHFPSLEQIQHNPS*TPSPCL*MVSDLCLQKRGLQTRQSRRRLIVVSLD  291
                AFWTVISLPAYPYH*RPFQGNTFPFPLRSLRTTSSKRLTDICMI*KCIQHFPSLEQIQHNPS*TPSPCL*MVSDLCLQKRGLQTRQSRRRLIVVSLD
Subject   6781  AFWTVISLPAYPYH*RPFQGNTFPFPLRSLRTTSSKRLTDICMI*KCIQHFPSLEQIQHNPS*TPSPCL*MVSDLCLQKRGLQTRQSRRRLIVVSLD  7071

Range 3: 6783 to 7073 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
227.9 bits(491) 0.0 97/97(100%) 0/97(0%) Minus/Minus
Query        3  WPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQQVANV*RTSV*FRSVYNTFLLWNKYSTIHPKHLLPVYEWYLIYVSKKEAFRRASREDA*L**AL  293
                WPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQQVANV*RTSV*FRSVYNTFLLWNKYSTIHPKHLLPVYEWYLIYVSKKEAFRRASREDA*L**AL
Subject   6783  WPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQQVANV*RTSV*FRSVYNTFLLWNKYSTIHPKHLLPVYEWYLIYVSKKEAFRRASREDA*L**AL  7073

Range 4: 6781 to 7071 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
221.9 bits(478) 0.0 97/97(100%) 0/97(0%) Plus/Plus
Query        1  IKAYYN*ASSRLARLKASFLET*IRYHS*TGRRCLGWIVLYLFQRRKVLYTLLNHTDVR*TFATCCPQ*P*GERKSVTLKRSLVVRISR**DHCPKG  291
                IKAYYN*ASSRLARLKASFLET*IRYHS*TGRRCLGWIVLYLFQRRKVLYTLLNHTDVR*TFATCCPQ*P*GERKSVTLKRSLVVRISR**DHCPKG
Subject   6781  IKAYYN*ASSRLARLKASFLET*IRYHS*TGRRCLGWIVLYLFQRRKVLYTLLNHTDVR*TFATCCPQ*P*GERKSVTLKRSLVVRISR**DHCPKG  7071

Range 5: 6782 to 7072 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
208.2 bits(448) 0.0 97/97(100%) 0/97(0%) Plus/Plus
Query        2  SRLTTIRRLRDWRV*RPLFWRHKSDTIHKQGEGV*DGLCCICSKEGKCCIHF*IIQMSXXXXXXXXXNDRKGNGKVLP*KGR*W*G*AGSEITVQKA  292
                SRLTTIRRLRDWRV*RPLFWRHKSDTIHKQGEGV*DGLCCICSKEGKCCIHF*IIQMSVRRLLLVVLNDRKGNGKVLP*KGR*W*G*AGSEITVQKA
Subject   6782  SRLTTIRRLRDWRV*RPLFWRHKSDTIHKQGEGV*DGLCCICSKEGKCCIHF*IIQMSVRRLLLVVLNDRKGNGKVLP*KGR*W*G*AGSEITVQKA  7072

Range 6: 6782 to 7021 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
188.5 bits(405) 0.0 80/80(100%) 0/80(0%) Minus/Minus
Query        2  FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTNTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPNCSKP*  241
                FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTNTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPNCSKP*
Subject   6782  FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTNTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPNCSKP*  7021

Grapevine leafroll associated virus 3, complete genome

Sequence ID: AF037268.2 Length: 17919 Number of Matches: 6

Range 1: 6204 to 6494 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
234.3 bits(505) 0.0 97/97(100%) 0/97(0%) Plus/Plus
Query        3  QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP  293
                QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP
Subject   6204  QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP  6494

Range 2: 6204 to 6494 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
197.6 bits(425) 0.0 84/97(87%) 0/97(0%) Minus/Minus
Query        3  WPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQQVANV*RTSV*FRSVYNTFLLWNKYSTIHPKHLLPVYEWYLIYVSKKEAFRRASREDA*L**AL  293
                WPFGQ S+Y  +LT NDLFRVTLFRSPYGH*GQQVAN+*RT V FRSVYN FLLWNK STIHPKHLLPVYEWYLIYVSKKEAFRRA  EDA*L**AL
Subject   6204  WPFGQRSYYWFVLTANDLFRVTLFRSPYGH*GQQVANI*RTPVRFRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**AL  6494

Range 3: 6202 to 6492 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
191.7 bits(412) 0.0 82/97(85%) 0/97(0%) Minus/Minus
Query        1  AFWTVISLPAYPYH*RPFQGNTFPFPLRSLRTTSSKRLTDICMI*KCIQHFPSLEQIQHNPS*TPSPCL*MVSDLCLQKRGLQTRQSRRRLIVVSLD  291
                AFWT I L   PY *RPFQGNTFPFPLRSLRTTSSK LTD C I*KCIQ FPSLEQ QHNPS*TPSPCL*MVSDLCLQKRGL TR+ RRRL+VVSLD
Subject   6202  AFWTAILLLVCPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCTI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLD  6492

Range 4: 6202 to 6492 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
189.8 bits(408) 0.0 84/97(87%) 0/97(0%) Plus/Plus
Query        1  IKAYYN*ASSRLARLKASFLET*IRYHS*TGRRCLGWIVLYLFQRRKVLYTLLNHTDVR*TFATCCPQ*P*GERKSVTLKRSLVVRISR**DHCPKG  291
                IKAYYN*ASS+ AR KASFLET*IRYHS*TGRRCLGWIVL+LFQRRK LYTLLN T VR* FATCCPQ*P*GERKSVTLKRSL VR ++**D CPKG
Subject   6202  IKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNRTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRTNQ**DRCPKG  6492

Range 5: 6203 to 6442 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
183.4 bits(394) 0.0 78/80(98%) 0/80(0%) Minus/Minus
Query        2  FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTNTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPNCSKP*  241
                FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGT TAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTP+CSKP*
Subject   6203  FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*  6442

Range 6: 6203 to 6493 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
167.9 bits(360) 0.0 82/97(85%) 0/97(0%) Plus/Plus
Query        2  SRLTTIRRLRDWRV*RPLFWRHKSDTIHKQGEGV*DGLCCICSKEGKCCIHF*IIQMSXXXXXXXXXNDRKGNGKVLP*KGR*W*G*AGSEITVQKA  292
                SRLTT RRLR+ RV RPLFWRHKSDTIHKQGEGV*DGLCC CSKEGK CIHF*I+Q+SVR LLLVVLNDRKGNGKVLP*KGR* *G   S+I VQKA
Subject   6203  SRLTTTRRLRNRRVGRPLFWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IVQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*GQTSSKIAVQKA  6493

Grapevine leafroll associated virus 3 isolate 621, complete genome

Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 6

Range 1: 6783 to 7073 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
234.3 bits(505) 0.0 97/97(100%) 0/97(0%) Plus/Plus
Query        3  QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP  293
                QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP
Subject   6783  QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP  7073

Range 2: 6783 to 7073 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
200.4 bits(431) 0.0 86/97(89%) 0/97(0%) Minus/Minus
Query        3  WPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQQVANV*RTSV*FRSVYNTFLLWNKYSTIHPKHLLPVYEWYLIYVSKKEAFRRASREDA*L**AL  293
                WPFGQ S+Y  ILT NDLFRVTLFRSPYGH*GQQVAN+*RT V*FRSVYN FLLWNK STIHPKHLLPVYEWYLIYVSKKEAFRRA  EDA*L**AL
Subject   6783  WPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**AL  7073

Range 3: 6781 to 7071 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
198.6 bits(427) 0.0 84/97(87%) 0/97(0%) Minus/Minus
Query        1  AFWTVISLPAYPYH*RPFQGNTFPFPLRSLRTTSSKRLTDICMI*KCIQHFPSLEQIQHNPS*TPSPCL*MVSDLCLQKRGLQTRQSRRRLIVVSLD  291
                AFWT I L  YPY *RPFQGNTFPFPLRSLRTTSSK LTD CMI*KCIQ FPSLEQ QHNPS*TPSPCL*MVSDLCLQKRGL TR+ RRRL+VVSLD
Subject   6781  AFWTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLD  7071

Range 4: 6781 to 7071 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
195.8 bits(421) 0.0 86/97(89%) 0/97(0%) Plus/Plus
Query        1  IKAYYN*ASSRLARLKASFLET*IRYHS*TGRRCLGWIVLYLFQRRKVLYTLLNHTDVR*TFATCCPQ*P*GERKSVTLKRSLVVRISR**DHCPKG  291
                IKAYYN*ASS+ AR KASFLET*IRYHS*TGRRCLGWIVL+LFQRRK LYTLLNHT VR* FATCCPQ*P*GERKSVTLKRSL VRI++**D CPKG
Subject   6781  IKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKG  7071

Range 5: 6782 to 7021 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
183.4 bits(394) 0.0 78/80(98%) 0/80(0%) Minus/Minus
Query        2  FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTNTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPNCSKP*  241
                FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGT TAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTP+CSKP*
Subject   6782  FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*  7021

Range 6: 6782 to 7072 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
170.6 bits(366) 0.0 84/97(87%) 0/97(0%) Plus/Plus
Query        2  SRLTTIRRLRDWRV*RPLFWRHKSDTIHKQGEGV*DGLCCICSKEGKCCIHF*IIQMSXXXXXXXXXNDRKGNGKVLP*KGR*W*G*AGSEITVQKA  292
                SRLTT RRLR+ RV RPLFWRHKSDTIHKQGEGV*DGLCC CSKEGK CIHF*IIQ+SVR LLLVVLNDRKGNGKVLP*KGR* *G*  S+I VQKA
Subject   6782  SRLTTTRRLRNRRVGRPLFWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKA  7072

Nucleotide Sequence (322 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
33
66
99
132
165
198
231
264
297
322

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
238.0 1278.5 21% 3.234e-61 98% KM058745.1
198.6 580.7 31% 2.355e-49 40% JQ796828.1
197.6 571.7 38% 4.445e-49 35% GQ352632.1
197.6 571.7 38% 4.445e-49 35% EU259806.1
197.6 571.7 38% 4.445e-49 35% KX756668.1

Alignments

Grapevine leafroll associated virus 3 isolate GH24, complete genome

Sequence ID: KM058745.1 Length: 18493 Number of Matches: 7

Range 1: 13081 to 13374 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
238.0 bits(513) 0.0 98/98(100%) 0/98(0%) Plus/Minus
Query       27  RVINQNDNQRGYWGQPQPTILLH*TTN*FFSEGGANFTAFTYA*VVTQS*KIRREFMKRVE*FYRHVRFQLFDSPGHFLIEESFQNCFYRDHNVVYPS  320
                RVINQNDNQRGYWGQPQPTILLH*TTN*FFSEGGANFTAFTYA*VVTQS*KIRREFMKRVE*FYRHVRFQLFDSPGHFLIEESFQNCFYRDHNVVYPS
Subject  13081  RVINQNDNQRGYWGQPQPTILLH*TTN*FFSEGGANFTAFTYA*VVTQS*KIRREFMKRVE*FYRHVRFQLFDSPGHFLIEESFQNCFYRDHNVVYPS  13374

Range 2: 13081 to 13374 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
230.2 bits(496) 0.0 97/98(99%) 0/98(0%) Minus/Plus
Query       27  AWVYHVVVTVKTILKAFFNKEMPGGIKELKPYVPIESFDPFHELSSYFSRLSYDLSVGKGSKICPTLAEKLVRRLMEENCRLRLTPVAALIIILIYYS  320
                AWVY VVVTVKTILKAFFNKEMPGGIKELKPYVPIESFDPFHELSSYFSRLSYDLSVGKGSKICPTLAEKLVRRLMEENCRLRLTPVAALIIILIYYS
Subject  13081  AWVYDVVVTVKTILKAFFNKEMPGGIKELKPYVPIESFDPFHELSSYFSRLSYDLSVGKGSKICPTLAEKLVRRLMEENCRLRLTPVAALIIILIYYS  13374

Range 3: 13079 to 13372 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
223.8 bits(482) 0.0 97/98(99%) 0/98(0%) Plus/Minus
Query       29  SNKSK**SARLLGSTSTYNSPPLDDELVFQRGWGKFYCLYLRLSRNSVLKNKTRVHEKGRMILSARTVSTL*FPRAFPY*RKLSKLFLP*PQRGIPKP  322
                SNKSK**SARLLGSTSTYNSPPLDDELVFQRGWGKFYCLYLRLSRNSVLKNKTRVHEKGRMILSARTVSTL*FPRAFPY*RKLSKLFLP*PQR IPKP
Subject  13079  SNKSK**SARLLGSTSTYNSPPLDDELVFQRGWGKFYCLYLRLSRNSVLKNKTRVHEKGRMILSARTVSTL*FPRAFPY*RKLSKLFLP*PQRRIPKP  13372

Range 4: 13079 to 13372 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
214.6 bits(462) 0.0 98/98(100%) 0/98(0%) Minus/Plus
Query       29  WLGYTTLWSR*KQF*KLSSIRKCPGESKS*NRTCR*NHSTLFMNSRLIFQD*VTT*A*VKAVKFAPPSLKN*FVV*WRRIVG*G*PQ*PR*LSF*FIT  322
                WLGYTTLWSR*KQF*KLSSIRKCPGESKS*NRTCR*NHSTLFMNSRLIFQD*VTT*A*VKAVKFAPPSLKN*FVV*WRRIVG*G*PQ*PR*LSF*FIT
Subject  13079  WLGYTTLWSR*KQF*KLSSIRKCPGESKS*NRTCR*NHSTLFMNSRLIFQD*VTT*A*VKAVKFAPPSLKN*FVV*WRRIVG*G*PQ*PR*LSF*FIT  13372

Range 5: 13080 to 13373 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
200.4 bits(431) 0.0 97/98(99%) 0/98(0%) Minus/Plus
Query       28  GLGIPRCGHGKNNFESFLQ*GNARGNQRVETVRADRIIRPFS*TLVLFFKTEXXXXXXXRQ*NLPHPR*KTSSSSNGGEL*VEVDPSSRADYHFDLLL  321
                GLGI RCGHGKNNFESFLQ*GNARGNQRVETVRADRIIRPFS*TLVLFFKTELRLKRR*RQ*NLPHPR*KTSSSSNGGEL*VEVDPSSRADYHFDLLL
Subject  13080  GLGIRRCGHGKNNFESFLQ*GNARGNQRVETVRADRIIRPFS*TLVLFFKTELRLKRR*RQ*NLPHPR*KTSSSSNGGEL*VEVDPSSRADYHFDLLL  13373

Range 6: 13080 to 13205 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
95.0 bits(201) 0.0 41/42(98%) 0/42(0%) Plus/Minus
Query      196  *KGSNDSIGTYGFNSLIPPGISLLKKAFKIVFTVTTTWYTQA  321
                *KGSNDSIGTYGFNSLIPPGISLLKKAFKIVFTVTTT YTQA
Subject  13080  *KGSNDSIGTYGFNSLIPPGISLLKKAFKIVFTVTTTSYTQA  13205

Range 7: 13266 to 13373 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.7 bits(161) 0.0 36/36(100%) 0/36(0%) Plus/Minus
Query       28  E**IKMIISAATGVNLNLQFSSIRRRTSFSARVGQI  135
                E**IKMIISAATGVNLNLQFSSIRRRTSFSARVGQI
Subject  13266  E**IKMIISAATGVNLNLQFSSIRRRTSFSARVGQI  13373

Grapevine leafroll associated virus 3 clone 3, complete genome

Sequence ID: JQ796828.1 Length: 18552 Number of Matches: 7

Range 1: 13146 to 13439 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
198.6 bits(427) 0.0 82/98(84%) 0/98(0%) Minus/Plus
Query       27  AWVYHVVVTVKTILKAFFNKEMPGGIKELKPYVPIESFDPFHELSSYFSRLSYDLSVGKGSKICPTLAEKLVRRLMEENCRLRLTPVAALIIILIYYS  320
                +WVY VV T+KT LK FFNK+M GGIKELKPYVPIESFDPFHELSSYFSRLSY LS GKG+KICP LAEKLVRRLME+N RLRLTPVA+LIIIL+YYS
Subject  13146  SWVYDVVATIKTALKLFFNKDMLGGIKELKPYVPIESFDPFHELSSYFSRLSYQLSAGKGAKICPELAEKLVRRLMEDNHRLRLTPVASLIIILVYYS  13439

Range 2: 13148 to 13267 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
65.7 bits(137) 0.0 29/40(72%) 0/40(0%) Plus/Minus
Query      199  KGSNDSIGTYGFNSLIPPGISLLKKAFKIVFTVTTTWYTQ  318
                KGSNDSIGT GFNSL+PP +SLLKK+FK V  V TT  TQ
Subject  13148  KGSNDSIGT*GFNSLMPPNMSLLKKSFKAVLIVATTS*TQ  13267

Range 3: 13331 to 13438 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.6 bits(104) 0.0 25/36(69%) 0/36(0%) Plus/Minus
Query       28  E**IKMIISAATGVNLNLQFSSIRRRTSFSARVGQI  135
                E**  +II+ ATGV+LNL  SSIRRRT+FSA  GQI
Subject  13331  E**TNIIINEATGVSLNL*LSSIRRRTNFSASSGQI  13438

Range 4: 13149 to 13436 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.9 bits(168) 0.0 43/96(45%) 0/96(0%) Plus/Minus
Query       30  VINQNDNQRGYWGQPQPTILLH*TTN*FFSEGGANFTAFTYA*VVTQS*KIRREFMKRVE*FYRHVRFQLFDSPGHFLIEESFQNCFYRDHNVVYP  317
                +INQ  NQRG+    Q  I+ H T N F  E  A+F+ F+  *+VT   KIRR  M+R+E*   +V F LF++  H LI+E FQ+   R H VV P
Subject  13149  IINQYYNQRGHRS*SQSVIIFHKTANQFLCELRADFSTFSGT*LVT*PRKIRR*LMERIE*LDWYVGF*LFNATQHVLIKEKFQSSLNRGHYVVDP  13436

Range 5: 13144 to 13434 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.4 bits(143) 0.0 45/97(46%) 0/97(0%) Minus/Plus
Query       32  WLGYTTLWSR*KQF*KLSSIRKCPGESKS*NRTCR*NHSTLFMNSRLIFQD*VTT*A*VKAVKFAPPSLKN*FVV*WRRIVG*G*PQ*PR*LSF*FI  322
                +LG TT W R +  *  S IR C    KS*N T + +HS L M+ RLIF+ *VT *   K +K A  S +N F V W+ I  * * + PR*L + FI
Subject  13144  FLGSTT*WPRLRLL*NFSLIRTCWVALKS*NPTYQSSHSILSMSYRLIFRG*VTN*VPEKVLKSALSSQRNWFAVLWKIITD*D*LRWPR*L*YWFI  13434

Range 6: 13148 to 13435 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
65.7 bits(137) 0.0 41/96(43%) 0/96(0%) Minus/Plus
Query       31  LGIPRCGHGKNNFESFLQ*GNARGNQRVETVRADRIIRPFS*TLVLFFKTEXXXXXXXRQ*NLPHPR*KTSSSSNGGEL*VEVDPSSRADYHFDLL  318
                LG+ R GH  + FE+FL *G+   + RV+T+R +R+IR F * +VLFF+ +L  K R R *NLP  R +  S S G    +E +     DY+  LL
Subject  13148  LGLRRSGHD*DCFETFL**GHVGWH*RVKTLRTNRVIRSFP*AIVLFFEVKLPTKCRKRC*NLP*ARREIGSPSYGR*SQIETNSGGLVDYNIGLL  13435

Range 7: 13147 to 13437 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.9 bits(107) 0.0 39/97(40%) 0/97(0%) Plus/Minus
Query       29  SNKSK**SARLLGSTSTYNSPPLDDELVFQRGWGKFYCLYLRLSRNSVLKNKTRVHEKGRMILSARTVSTL*FPRAFPY*RKLSKLFLP*PQRGIPK  319
                +NK   *S R     S  +  P D E +  R  G+F  L+  L  N   KNKT  H K RM    R V TL*     PY*RK+SK     P R  PK
Subject  13147  NNKPIL*STRPPELVSICDYLP*DGEPISLRAQGRF*HLFRHLVGNLTSKNKTIAHGKDRMTRLVRRVLTL*CHPTCPY*RKVSKQS*SWPLRRRPK  13437

Grapevine leafroll associated virus 3 isolate 623, complete genome

Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 8

Range 1: 13081 to 13374 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
197.6 bits(425) 0.0 78/98(80%) 0/98(0%) Minus/Plus
Query       27  AWVYHVVVTVKTILKAFFNKEMPGGIKELKPYVPIESFDPFHELSSYFSRLSYDLSVGKGSKICPTLAEKLVRRLMEENCRLRLTPVAALIIILIYYS  320
                AWVY V+ T+K ++K+FFNK+ PGGIK+LKPYVPIESFDPFHELSSYFSRLSY+++ GKG KICP +AEKLVRRLMEEN RLRLTPVAALII+LIYYS
Subject  13081  AWVYDVIATLKLVIKSFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYRLRLTPVAALIIMLIYYS  13374

Range 2: 13080 to 13205 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
66.6 bits(139) 0.0 29/42(69%) 0/42(0%) Plus/Minus
Query      196  *KGSNDSIGTYGFNSLIPPGISLLKKAFKIVFTVTTTWYTQA  321
                *KGS DSIGTYGF SLIPPG+SLLK  F    +V  T YTQA
Subject  13080  *KGSKDSIGTYGFKSLIPPGVSLLKNDFMTSLSVAITSYTQA  13205

Range 3: 13266 to 13373 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.5 bits(117) 0.0 28/36(78%) 0/36(0%) Plus/Minus
Query       28  E**IKMIISAATGVNLNLQFSSIRRRTSFSARVGQI  135
                E**I +II AATGVNLNL FSSIRRRT+FSA  G I
Subject  13266  E**ISIIIKAATGVNLNL*FSSIRRRTNFSAISGHI  13373

Range 4: 13081 to 13371 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.7 bits(148) 0.0 35/97(36%) 0/97(0%) Plus/Minus
Query       30  VINQNDNQRGYWGQPQPTILLH*TTN*FFSEGGANFTAFTYA*VVTQS*KIRREFMKRVE*FYRHVRFQLFDSPGHFLIEESFQNCFYRDHNVVYPS  320
                V+NQ++    +WG   P I LH*T +    +  A  + FT   ++TQ  +I  + +K VE  YRH+ F +F++PG  L+E+ F +   R  +V+YPS
Subject  13081  VVNQHNY*GRHWG*S*PIIFLH*TAHQLLGDLRAYLSPFTCRHLITQPREIG*KLVKGVEGLYRHIWF*VFNTPGCVLVEKRFYDQLERSDHVIYPS  13371

Range 5: 13124 to 13372 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
60.2 bits(125) 0.0 34/83(41%) 0/83(0%) Plus/Minus
Query       29  SNKSK**SARLLGSTSTYNSPPLDDELVFQRGWGKFYCLYLRLSRNSVLKNKTRVHEKGRMILSARTVSTL*FPRAFPY*RKL  277
                S+KS *     LG   TYN PPLD     +R  G  + LYL  S NS  +N+ +  E+GR  L A  V +L*+PR  P *+ +
Subject  13124  SSKSA*LLRPPLGLILTYNFPPLDGAPTSRRSPGISFPLYLSSSHNST*RNRMKARERGRRTL*AHMVLSL*YPRVCPC*KTI  13372

Range 6: 13266 to 13373 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.4 bits(71) 0.0 15/36(42%) 0/36(0%) Minus/Plus
Query       28  NLPHPR*KTSSSSNGGEL*VEVDPSSRADYHFDLLL  135
                ++P  R +  + SNGG+L*V+++PS   + + DLLL
Subject  13266  DMPGDRREVGAPSNGGKL*VKINPSGGLNNYADLLL  13373

Range 7: 13083 to 13235 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.0 bits(70) 0.0 18/51(35%) 0/51(0%) Minus/Plus
Query      166  LGIPRCGHGKNNFESFLQ*GNARGNQRVETVRADRIIRPFS*TLVLFFKTE  318
                LGI R  + +   +   Q G+ RG  R++T+ A R++RP S   +LF   E
Subject  13083  LGI*RDRYAQAGHKIVFQQGHTRGY*RLKTICAYRVLRPLSRAFILFL*VE  13235

Range 8: 13082 to 13339 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.6 bits(102) 0.0 36/86(42%) 0/86(0%) Minus/Plus
Query       62  LGYTTLWSR*KQF*KLSSIRKCPGESKS*NRTCR*NHSTLFMNSRLIFQD*VTT*A*VKAVKFAPPSLKN*FVV*WRRIVG*G*PQ  319
                LGY T   R    *   S R  PG  K+*N  C *+ ST F +   I   *V  *  VK  ++A  S ++   V*WR+I+G* *PQ
Subject  13082  LGYMT*SLRSSWS*NRFSTRTHPGVLKT*NHMCL*SPSTPFTSFHPISLG*VMR*RQVKGERYARRSPRSWCAV*WRKIIG*D*PQ  13339

Grapevine leafroll associated virus 3 isolate GP18, complete genome

Sequence ID: EU259806.1 Length: 18498 Number of Matches: 8

Range 1: 13081 to 13374 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
197.6 bits(425) 0.0 78/98(80%) 0/98(0%) Minus/Plus
Query       27  AWVYHVVVTVKTILKAFFNKEMPGGIKELKPYVPIESFDPFHELSSYFSRLSYDLSVGKGSKICPTLAEKLVRRLMEENCRLRLTPVAALIIILIYYS  320
                AWVY V+ T+K ++K+FFNK+ PGGIK+LKPYVPIESFDPFHELSSYFSRLSY+++ GKG KICP +AEKLVRRLMEEN RLRLTPVAALII+LIYYS
Subject  13081  AWVYDVIATLKLVIKSFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYRLRLTPVAALIIMLIYYS  13374

Range 2: 13080 to 13205 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
66.6 bits(139) 0.0 29/42(69%) 0/42(0%) Plus/Minus
Query      196  *KGSNDSIGTYGFNSLIPPGISLLKKAFKIVFTVTTTWYTQA  321
                *KGS DSIGTYGF SLIPPG+SLLK  F    +V  T YTQA
Subject  13080  *KGSKDSIGTYGFKSLIPPGVSLLKNDFMTSLSVAITSYTQA  13205

Range 3: 13266 to 13373 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.5 bits(117) 0.0 28/36(78%) 0/36(0%) Plus/Minus
Query       28  E**IKMIISAATGVNLNLQFSSIRRRTSFSARVGQI  135
                E**I +II AATGVNLNL FSSIRRRT+FSA  G I
Subject  13266  E**ISIIIKAATGVNLNL*FSSIRRRTNFSAISGHI  13373

Range 4: 13081 to 13371 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.7 bits(148) 0.0 35/97(36%) 0/97(0%) Plus/Minus
Query       30  VINQNDNQRGYWGQPQPTILLH*TTN*FFSEGGANFTAFTYA*VVTQS*KIRREFMKRVE*FYRHVRFQLFDSPGHFLIEESFQNCFYRDHNVVYPS  320
                V+NQ++    +WG   P I LH*T +    +  A  + FT   ++TQ  +I  + +K VE  YRH+ F +F++PG  L+E+ F +   R  +V+YPS
Subject  13081  VVNQHNY*GRHWG*S*PIIFLH*TAHQLLGDLRAYLSPFTCRHLITQPREIG*KLVKGVEGLYRHIWF*VFNTPGCVLVEKRFYDQLERSDHVIYPS  13371

Range 5: 13124 to 13372 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
60.2 bits(125) 0.0 34/83(41%) 0/83(0%) Plus/Minus
Query       29  SNKSK**SARLLGSTSTYNSPPLDDELVFQRGWGKFYCLYLRLSRNSVLKNKTRVHEKGRMILSARTVSTL*FPRAFPY*RKL  277
                S+KS *     LG   TYN PPLD     +R  G  + LYL  S NS  +N+ +  E+GR  L A  V +L*+PR  P *+ +
Subject  13124  SSKSA*LLRPPLGLILTYNFPPLDGAPTSRRSPGISFPLYLSSSHNST*RNRMKARERGRRTL*AHMVLSL*YPRVCPC*KTI  13372

Range 6: 13266 to 13373 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.4 bits(71) 0.0 15/36(42%) 0/36(0%) Minus/Plus
Query       28  NLPHPR*KTSSSSNGGEL*VEVDPSSRADYHFDLLL  135
                ++P  R +  + SNGG+L*V+++PS   + + DLLL
Subject  13266  DMPGDRREVGAPSNGGKL*VKINPSGGLNNYADLLL  13373

Range 7: 13083 to 13235 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.0 bits(70) 0.0 18/51(35%) 0/51(0%) Minus/Plus
Query      166  LGIPRCGHGKNNFESFLQ*GNARGNQRVETVRADRIIRPFS*TLVLFFKTE  318
                LGI R  + +   +   Q G+ RG  R++T+ A R++RP S   +LF   E
Subject  13083  LGI*RDRYAQAGHKIVFQQGHTRGY*RLKTICAYRVLRPLSRAFILFL*VE  13235

Range 8: 13082 to 13339 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.6 bits(102) 0.0 36/86(42%) 0/86(0%) Minus/Plus
Query       62  LGYTTLWSR*KQF*KLSSIRKCPGESKS*NRTCR*NHSTLFMNSRLIFQD*VTT*A*VKAVKFAPPSLKN*FVV*WRRIVG*G*PQ  319
                LGY T   R    *   S R  PG  K+*N  C *+ ST F +   I   *V  *  VK  ++A  S ++   V*WR+I+G* *PQ
Subject  13082  LGYMT*SLRSSWS*NRFSTRTHPGVLKT*NHMCL*SPSTPFTSFHPISLG*VMR*RQVKGERYARRSPRSWCAV*WRKIIG*D*PQ  13339

Grapevine leafroll associated virus 3 isolate TC BR, complete genome

Sequence ID: KX756668.1 Length: 18498 Number of Matches: 8

Range 1: 13081 to 13374 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
197.6 bits(425) 0.0 78/98(80%) 0/98(0%) Minus/Plus
Query       27  AWVYHVVVTVKTILKAFFNKEMPGGIKELKPYVPIESFDPFHELSSYFSRLSYDLSVGKGSKICPTLAEKLVRRLMEENCRLRLTPVAALIIILIYYS  320
                AWVY V+ T+K ++K+FFNK+ PGGIK+LKPYVPIESFDPFHELSSYFSRLSY+++ GKG KICP +AEKLVRRLMEEN RLRLTPVAALII+LIYYS
Subject  13081  AWVYDVIATLKLVIKSFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYRLRLTPVAALIIMLIYYS  13374

Range 2: 13080 to 13205 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
66.6 bits(139) 0.0 29/42(69%) 0/42(0%) Plus/Minus
Query      196  *KGSNDSIGTYGFNSLIPPGISLLKKAFKIVFTVTTTWYTQA  321
                *KGS DSIGTYGF SLIPPG+SLLK  F    +V  T YTQA
Subject  13080  *KGSKDSIGTYGFKSLIPPGVSLLKNDFMTSLSVAITSYTQA  13205

Range 3: 13266 to 13373 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.5 bits(117) 0.0 28/36(78%) 0/36(0%) Plus/Minus
Query       28  E**IKMIISAATGVNLNLQFSSIRRRTSFSARVGQI  135
                E**I +II AATGVNLNL FSSIRRRT+FSA  G I
Subject  13266  E**ISIIIKAATGVNLNL*FSSIRRRTNFSAISGHI  13373

Range 4: 13081 to 13371 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.7 bits(148) 0.0 35/97(36%) 0/97(0%) Plus/Minus
Query       30  VINQNDNQRGYWGQPQPTILLH*TTN*FFSEGGANFTAFTYA*VVTQS*KIRREFMKRVE*FYRHVRFQLFDSPGHFLIEESFQNCFYRDHNVVYPS  320
                V+NQ++    +WG   P I LH*T +    +  A  + FT   ++TQ  +I  + +K VE  YRH+ F +F++PG  L+E+ F +   R  +V+YPS
Subject  13081  VVNQHNY*GRHWG*S*PIIFLH*TAHQLLGDLRAYLSPFTCRHLITQPREIG*KLVKGVEGLYRHIWF*VFNTPGCVLVEKRFYDQLERSDHVIYPS  13371

Range 5: 13124 to 13372 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
60.2 bits(125) 0.0 34/83(41%) 0/83(0%) Plus/Minus
Query       29  SNKSK**SARLLGSTSTYNSPPLDDELVFQRGWGKFYCLYLRLSRNSVLKNKTRVHEKGRMILSARTVSTL*FPRAFPY*RKL  277
                S+KS *     LG   TYN PPLD     +R  G  + LYL  S NS  +N+ +  E+GR  L A  V +L*+PR  P *+ +
Subject  13124  SSKSA*LLRPPLGLILTYNFPPLDGAPTSRRSPGISFPLYLSSSHNST*RNRMKARERGRRTL*AHMVLSL*YPRVCPC*KTI  13372

Range 6: 13266 to 13373 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.4 bits(71) 0.0 15/36(42%) 0/36(0%) Minus/Plus
Query       28  NLPHPR*KTSSSSNGGEL*VEVDPSSRADYHFDLLL  135
                ++P  R +  + SNGG+L*V+++PS   + + DLLL
Subject  13266  DMPGDRREVGAPSNGGKL*VKINPSGGLNNYADLLL  13373

Range 7: 13083 to 13235 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.0 bits(70) 0.0 18/51(35%) 0/51(0%) Minus/Plus
Query      166  LGIPRCGHGKNNFESFLQ*GNARGNQRVETVRADRIIRPFS*TLVLFFKTE  318
                LGI R  + +   +   Q G+ RG  R++T+ A R++RP S   +LF   E
Subject  13083  LGI*RDRYAQAGHKIVFQQGHTRGY*RLKTICAYRVLRPLSRAFILFL*VE  13235

Range 8: 13082 to 13339 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.6 bits(102) 0.0 36/86(42%) 0/86(0%) Minus/Plus
Query       62  LGYTTLWSR*KQF*KLSSIRKCPGESKS*NRTCR*NHSTLFMNSRLIFQD*VTT*A*VKAVKFAPPSLKN*FVV*WRRIVG*G*PQ  319
                LGY T   R    *   S R  PG  K+*N  C *+ ST F +   I   *V  *  VK  ++A  S ++   V*WR+I+G* *PQ
Subject  13082  LGYMT*SLRSSWS*NRFSTRTHPGVLKT*NHMCL*SPSTPFTSFHPISLG*VMR*RQVKGERYARRSPRSWCAV*WRKIIG*D*PQ  13339

Nucleotide Sequence (786 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
79
158
237
316
395
474
553
632
711
786

Descriptions

Alignments

Grapevine leafroll associated virus 3 isolate 6 18 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130300.1 Length: 4711 Number of Matches: 10

Range 1: 3534 to 3941 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
309.4 bits(669) 0.0 135/136(99%) 0/136(0%) Plus/Minus
Query        2  NV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQSSL**LHKPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY  409
                NV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQSSL**L KPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY
Subject   3534  NV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQSSL**LRKPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY  3941

Range 2: 2888 to 2965 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.0 bits(57) 0.0 13/26(50%) 0/26(0%) Plus/Minus
Query      390  ILPRQNIQISVFACPSPKNVQKRSAR  467
                +L + +  ISV ACPSPK V +  AR
Subject   2888  LLVKTSKNISVSACPSPKYVSR*PAR  2965

Range 3: 3536 to 3940 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
275.1 bits(594) 0.0 135/135(100%) 0/135(0%) Minus/Plus
Query        3  ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEXXXXXXXXXXXXXTELHRTILIDSIDSAFAYDQVGCLVGIARGLLKH  407
                ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEVNVVKAYVATTATTELHRTILIDSIDSAFAYDQVGCLVGIARGLLKH
Subject   3536  ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEVNVVKAYVATTATTELHRTILIDSIDSAFAYDQVGCLVGIARGLLKH  3940

Range 4: 2889 to 2945 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.0 bits(57) 0.0 12/19(63%) 0/19(0%) Minus/Plus
Query      410  RAERF*TFLGDGQANTDIW  466
                RA    T+LGDGQA+TDI+
Subject   2889  RAGYLETYLGDGQADTDIF  2945

Range 5: 3533 to 3940 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
275.5 bits(595) 0.0 135/136(99%) 0/136(0%) Plus/Minus
Query        3  MFKQTSSYAHQTPHLVISEGGVYTVNENCSMQLSRRCSSYISLHDVNLSLRIVYRCPXXXXXXXXXXXXXXXKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI  410
                MFKQTSSYAHQTPHLVISEGGVYTVNENCSMQLSRRCSSY+SLHDVNLSLRIVYRCPARRIINAIIRVNQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI
Subject   3533  MFKQTSSYAHQTPHLVISEGGVYTVNENCSMQLSRRCSSYVSLHDVNLSLRIVYRCPARRIINAIIRVNQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI  3940

Range 6: 3535 to 3942 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
265.9 bits(574) 0.0 135/136(99%) 0/136(0%) Minus/Plus
Query        1  YFVWGESRIGVRRFLEASLXXXXXXXXXXTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGLCSYYSDD*AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TF  408
                YFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGL SYYSDD*AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TF
Subject   3535  YFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGLRSYYSDD*AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TF  3942

Range 7: 3535 to 3792 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
205.4 bits(442) 0.0 86/86(100%) 0/86(0%) Plus/Minus
Query      151  CGSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI  408
                CGSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI
Subject   3535  CGSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI  3792

Range 8: 3847 to 3942 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.5 bits(165) 0.0 32/32(100%) 0/32(0%) Plus/Minus
Query        1  ECLSKPLAMPTKHPTWS*AKAESILSMRIVLC  96
                ECLSKPLAMPTKHPTWS*AKAESILSMRIVLC
Subject   3847  ECLSKPLAMPTKHPTWS*AKAESILSMRIVLC  3942

Range 9: 3534 to 3788 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
197.6 bits(425) 0.0 85/85(100%) 0/85(0%) Minus/Plus
Query      155  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQR*TI  409
                IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQR*TI
Subject   3534  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQR*TI  3788

Range 10: 3843 to 3941 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.0 bits(177) 0.0 33/33(100%) 0/33(0%) Minus/Plus
Query        2  SCIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNI  100
                SCIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNI
Subject   3843  SCIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNI  3941

Grapevine leafroll associated virus 3 isolate 6 102 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130301.1 Length: 4711 Number of Matches: 10

Range 1: 3534 to 3941 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
309.4 bits(669) 0.0 135/136(99%) 0/136(0%) Plus/Minus
Query        2  NV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQSSL**LHKPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY  409
                NV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQSSL**L KPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY
Subject   3534  NV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQSSL**LRKPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY  3941

Range 2: 2888 to 2965 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.0 bits(57) 0.0 13/26(50%) 0/26(0%) Plus/Minus
Query      390  ILPRQNIQISVFACPSPKNVQKRSAR  467
                +L + +  ISV ACPSPK V +  AR
Subject   2888  LLVKTSKNISVSACPSPKYVSR*PAR  2965

Range 3: 3536 to 3940 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
275.1 bits(594) 0.0 135/135(100%) 0/135(0%) Minus/Plus
Query        3  ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEXXXXXXXXXXXXXTELHRTILIDSIDSAFAYDQVGCLVGIARGLLKH  407
                ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEVNVVKAYVATTATTELHRTILIDSIDSAFAYDQVGCLVGIARGLLKH
Subject   3536  ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEVNVVKAYVATTATTELHRTILIDSIDSAFAYDQVGCLVGIARGLLKH  3940

Range 4: 2889 to 2945 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.0 bits(57) 0.0 12/19(63%) 0/19(0%) Minus/Plus
Query      410  RAERF*TFLGDGQANTDIW  466
                RA    T+LGDGQA+TDI+
Subject   2889  RAGYLETYLGDGQADTDIF  2945

Range 5: 3533 to 3940 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
275.5 bits(595) 0.0 135/136(99%) 0/136(0%) Plus/Minus
Query        3  MFKQTSSYAHQTPHLVISEGGVYTVNENCSMQLSRRCSSYISLHDVNLSLRIVYRCPXXXXXXXXXXXXXXXKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI  410
                MFKQTSSYAHQTPHLVISEGGVYTVNENCSMQLSRRCSSY+SLHDVNLSLRIVYRCPARRIINAIIRVNQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI
Subject   3533  MFKQTSSYAHQTPHLVISEGGVYTVNENCSMQLSRRCSSYVSLHDVNLSLRIVYRCPARRIINAIIRVNQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI  3940

Range 6: 3535 to 3942 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
265.9 bits(574) 0.0 135/136(99%) 0/136(0%) Minus/Plus
Query        1  YFVWGESRIGVRRFLEASLXXXXXXXXXXTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGLCSYYSDD*AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TF  408
                YFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGL SYYSDD*AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TF
Subject   3535  YFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGLRSYYSDD*AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TF  3942

Range 7: 3535 to 3792 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
205.4 bits(442) 0.0 86/86(100%) 0/86(0%) Plus/Minus
Query      151  CGSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI  408
                CGSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI
Subject   3535  CGSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI  3792

Range 8: 3847 to 3942 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.5 bits(165) 0.0 32/32(100%) 0/32(0%) Plus/Minus
Query        1  ECLSKPLAMPTKHPTWS*AKAESILSMRIVLC  96
                ECLSKPLAMPTKHPTWS*AKAESILSMRIVLC
Subject   3847  ECLSKPLAMPTKHPTWS*AKAESILSMRIVLC  3942

Range 9: 3534 to 3788 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
197.6 bits(425) 0.0 85/85(100%) 0/85(0%) Minus/Plus
Query      155  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQR*TI  409
                IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQR*TI
Subject   3534  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQR*TI  3788

Range 10: 3843 to 3941 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.0 bits(177) 0.0 33/33(100%) 0/33(0%) Minus/Plus
Query        2  SCIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNI  100
                SCIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNI
Subject   3843  SCIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNI  3941

Grapevine leafroll associated virus 3 isolate 6 114 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130303.1 Length: 4711 Number of Matches: 10

Range 1: 3534 to 3941 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
309.4 bits(669) 0.0 135/136(99%) 0/136(0%) Plus/Minus
Query        2  NV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQSSL**LHKPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY  409
                NV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQSSL**L KPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY
Subject   3534  NV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQSSL**LRKPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY  3941

Range 2: 2888 to 2965 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.0 bits(57) 0.0 13/26(50%) 0/26(0%) Plus/Minus
Query      390  ILPRQNIQISVFACPSPKNVQKRSAR  467
                +L + +  ISV ACPSPK V +  AR
Subject   2888  LLVKTSKNISVSACPSPKYVSR*PAR  2965

Range 3: 3536 to 3940 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
275.1 bits(594) 0.0 135/135(100%) 0/135(0%) Minus/Plus
Query        3  ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEXXXXXXXXXXXXXTELHRTILIDSIDSAFAYDQVGCLVGIARGLLKH  407
                ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEVNVVKAYVATTATTELHRTILIDSIDSAFAYDQVGCLVGIARGLLKH
Subject   3536  ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEVNVVKAYVATTATTELHRTILIDSIDSAFAYDQVGCLVGIARGLLKH  3940

Range 4: 2889 to 2945 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.0 bits(57) 0.0 12/19(63%) 0/19(0%) Minus/Plus
Query      410  RAERF*TFLGDGQANTDIW  466
                RA    T+LGDGQA+TDI+
Subject   2889  RAGYLETYLGDGQADTDIF  2945

Range 5: 3533 to 3940 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
275.5 bits(595) 0.0 135/136(99%) 0/136(0%) Plus/Minus
Query        3  MFKQTSSYAHQTPHLVISEGGVYTVNENCSMQLSRRCSSYISLHDVNLSLRIVYRCPXXXXXXXXXXXXXXXKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI  410
                MFKQTSSYAHQTPHLVISEGGVYTVNENCSMQLSRRCSSY+SLHDVNLSLRIVYRCPARRIINAIIRVNQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI
Subject   3533  MFKQTSSYAHQTPHLVISEGGVYTVNENCSMQLSRRCSSYVSLHDVNLSLRIVYRCPARRIINAIIRVNQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI  3940

Range 6: 3535 to 3942 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
265.9 bits(574) 0.0 135/136(99%) 0/136(0%) Minus/Plus
Query        1  YFVWGESRIGVRRFLEASLXXXXXXXXXXTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGLCSYYSDD*AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TF  408
                YFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGL SYYSDD*AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TF
Subject   3535  YFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGLRSYYSDD*AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TF  3942

Range 7: 3535 to 3792 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
205.4 bits(442) 0.0 86/86(100%) 0/86(0%) Plus/Minus
Query      151  CGSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI  408
                CGSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI
Subject   3535  CGSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI  3792

Range 8: 3847 to 3942 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.5 bits(165) 0.0 32/32(100%) 0/32(0%) Plus/Minus
Query        1  ECLSKPLAMPTKHPTWS*AKAESILSMRIVLC  96
                ECLSKPLAMPTKHPTWS*AKAESILSMRIVLC
Subject   3847  ECLSKPLAMPTKHPTWS*AKAESILSMRIVLC  3942

Range 9: 3534 to 3788 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
197.6 bits(425) 0.0 85/85(100%) 0/85(0%) Minus/Plus
Query      155  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQR*TI  409
                IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQR*TI
Subject   3534  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQR*TI  3788

Range 10: 3843 to 3941 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.0 bits(177) 0.0 33/33(100%) 0/33(0%) Minus/Plus
Query        2  SCIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNI  100
                SCIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNI
Subject   3843  SCIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNI  3941

Grapevine leafroll associated virus 3 isolate 6 115 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130304.1 Length: 4711 Number of Matches: 10

Range 1: 3534 to 3941 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
309.4 bits(669) 0.0 135/136(99%) 0/136(0%) Plus/Minus
Query        2  NV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQSSL**LHKPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY  409
                NV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQSSL**L KPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY
Subject   3534  NV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQSSL**LRKPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY  3941

Range 2: 2888 to 2965 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.0 bits(57) 0.0 13/26(50%) 0/26(0%) Plus/Minus
Query      390  ILPRQNIQISVFACPSPKNVQKRSAR  467
                +L + +  ISV ACPSPK V +  AR
Subject   2888  LLVKTSKNISVSACPSPKYVSR*PAR  2965

Range 3: 3536 to 3940 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
275.1 bits(594) 0.0 135/135(100%) 0/135(0%) Minus/Plus
Query        3  ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEXXXXXXXXXXXXXTELHRTILIDSIDSAFAYDQVGCLVGIARGLLKH  407
                ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEVNVVKAYVATTATTELHRTILIDSIDSAFAYDQVGCLVGIARGLLKH
Subject   3536  ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEVNVVKAYVATTATTELHRTILIDSIDSAFAYDQVGCLVGIARGLLKH  3940

Range 4: 2889 to 2945 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.0 bits(57) 0.0 12/19(63%) 0/19(0%) Minus/Plus
Query      410  RAERF*TFLGDGQANTDIW  466
                RA    T+LGDGQA+TDI+
Subject   2889  RAGYLETYLGDGQADTDIF  2945

Range 5: 3533 to 3940 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
275.5 bits(595) 0.0 135/136(99%) 0/136(0%) Plus/Minus
Query        3  MFKQTSSYAHQTPHLVISEGGVYTVNENCSMQLSRRCSSYISLHDVNLSLRIVYRCPXXXXXXXXXXXXXXXKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI  410
                MFKQTSSYAHQTPHLVISEGGVYTVNENCSMQLSRRCSSY+SLHDVNLSLRIVYRCPARRIINAIIRVNQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI
Subject   3533  MFKQTSSYAHQTPHLVISEGGVYTVNENCSMQLSRRCSSYVSLHDVNLSLRIVYRCPARRIINAIIRVNQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI  3940

Range 6: 3535 to 3942 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
265.9 bits(574) 0.0 135/136(99%) 0/136(0%) Minus/Plus
Query        1  YFVWGESRIGVRRFLEASLXXXXXXXXXXTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGLCSYYSDD*AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TF  408
                YFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGL SYYSDD*AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TF
Subject   3535  YFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGLRSYYSDD*AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TF  3942

Range 7: 3535 to 3792 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
205.4 bits(442) 0.0 86/86(100%) 0/86(0%) Plus/Minus
Query      151  CGSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI  408
                CGSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI
Subject   3535  CGSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI  3792

Range 8: 3847 to 3942 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.5 bits(165) 0.0 32/32(100%) 0/32(0%) Plus/Minus
Query        1  ECLSKPLAMPTKHPTWS*AKAESILSMRIVLC  96
                ECLSKPLAMPTKHPTWS*AKAESILSMRIVLC
Subject   3847  ECLSKPLAMPTKHPTWS*AKAESILSMRIVLC  3942

Range 9: 3534 to 3788 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
197.6 bits(425) 0.0 85/85(100%) 0/85(0%) Minus/Plus
Query      155  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQR*TI  409
                IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQR*TI
Subject   3534  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQR*TI  3788

Range 10: 3843 to 3941 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.0 bits(177) 0.0 33/33(100%) 0/33(0%) Minus/Plus
Query        2  SCIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNI  100
                SCIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNI
Subject   3843  SCIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNI  3941

Grapevine leafroll associated virus 3 isolate GH24, complete genome

Sequence ID: KM058745.1 Length: 18493 Number of Matches: 16

Range 1: 10151 to 10468 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
241.6 bits(521) 0.0 103/106(97%) 0/106(0%) Minus/Plus
Query      453  GFILEEFNLFVFILCNCTGVV*YSRYSFSAPEIFGYVLRAFPYCL*IIF*GVWS*RPFLSDGRG*CASIAYTALSSVK*RVSEFR*QLFGECSAVAMCCGFPC*AF  770
                GF L EFNLFVFILCNCTGVV*YSRYSFSAPEIFGYVLRAFPYCL*+IF*GVWS*RPFLSDGRG*CASIAYTALSSVK*RVSEFR*QLFGECSAVAMCCGFPC*AF
Subject  10151  GFNL*EFNLFVFILCNCTGVV*YSRYSFSAPEIFGYVLRAFPYCL*VIF*GVWS*RPFLSDGRG*CASIAYTALSSVK*RVSEFR*QLFGECSAVAMCCGFPC*AF  10468

Range 2: 17267 to 17671 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
124.8 bits(266) 0.0 64/135(47%) 0/135(0%) Minus/Plus
Query        3  ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEXXXXXXXXXXXXXTELHRTILIDSIDSAFAYDQVGCLVGIARGLLKH  407
                +L GE+RG     +L L C  R   GNV+++LL S   *  MD+S II+QILSA+Y+ND++A+YIL NA+ +V DT     + DP  EVN +KA+V +  T ++++ I++ SIDSAF YD VGC+  IAR L++H
Subject  17267  LLIGESRGKSASHALTLTCEPRVAQGNVIEYLLPSLF**VEMDVSSIIMQILSAIYSNDLSAIYILSNAFKNVSDTIGDGVVVDPLNEVNTIKAFVNSFVTKQMYKEIIVQSIDSAFEYDHVGCITHIARCLVRH  17671

Range 3: 16637 to 16675 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.1 bits(68) 0.0 13/13(100%) 0/13(0%) Minus/Plus
Query      411  NVFRGRASEYRYL  449
                NVFRGRASEYRYL
Subject  16637  NVFRGRASEYRYL  16675

Range 4: 10150 to 10467 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
238.9 bits(515) 0.0 103/106(97%) 0/106(0%) Plus/Minus
Query      454  NAQHGNPQHIATALHSPNNC*RNSLTRYLTLESAV*AIEAH*PRPSLRKGL*DHTPQKIIYKQ*GKARSTYPKISGAEKLYLLY*TTPVQLQRIKTNKLNSSKINP  771
                NAQHGNPQHIATALHSPNNC*RNSLTRYLTLESAV*AIEAH*PRPSLRKGL*DHTPQKI YKQ*GKARSTYPKISGAEKLYLLY*TTPVQLQRIKTNKLNS K+NP
Subject  10150  NAQHGNPQHIATALHSPNNC*RNSLTRYLTLESAV*AIEAH*PRPSLRKGL*DHTPQKITYKQ*GKARSTYPKISGAEKLYLLY*TTPVQLQRIKTNKLNSYKLNP  10467

Range 5: 17308 to 17520 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.6 bits(104) 0.0 31/71(44%) 0/71(0%) Plus/Minus
Query      154  GSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFK  366
                GS      +VS T L AL KM* A  SLLY AERIC II++ S+      E  +   TFP   L +Q   K
Subject  17308  GSTTTPSPIVSLTFLKALDKM*IADRSLLYMAERICIIIDETSISTY*NKEGKRYSITFPCATLGSQVRVK  17520

Range 6: 16633 to 16674 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.5 bits(69) 0.0 13/14(93%) 0/14(0%) Plus/Minus
Query      412  RYLYSLARPLKTFK  453
                RYLYSLARPLKTF+
Subject  16633  RYLYSLARPLKTFR  16674

Range 7: 17599 to 17670 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
32.7 bits(65) 0.0 14/24(58%) 0/24(0%) Plus/Minus
Query        4  CLSKPLAMPTKHPTWS*AKAESIL  75
                C +K LAM    PTWS + AESIL
Subject  17599  CRTKHLAMCVMQPTWSYSNAESIL  17670

Range 8: 10152 to 10469 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
238.0 bits(513) 0.0 104/106(98%) 0/106(0%) Minus/Plus
Query      452  DLFWRNLIYLFLFFVIVQE*FSIVGIVFLLRRFLGMCSGLFLIVYRLFFEEYGLKDLSSVTGAVSALQSLIQRFPALSNELANFANSYLASVVQWRCVADFRAERF  769
                DL  RNLIYLFLFFVIVQE*FSIVGIVFLLRRFLGMCSGLFLIVYRLFFEEYGLKDLSSVTGAVSALQSLIQRFPALSNELANFANSYLASVVQWRCVADFRAERF
Subject  10152  DLICRNLIYLFLFFVIVQE*FSIVGIVFLLRRFLGMCSGLFLIVYRLFFEEYGLKDLSSVTGAVSALQSLIQRFPALSNELANFANSYLASVVQWRCVADFRAERF  10469

Range 9: 16620 to 16676 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
32.7 bits(65) 0.0 14/19(74%) 0/19(0%) Minus/Plus
Query      410  RAERF*TFLGDGQANTDIW  466
                RA    TFLGDGQANTDI+
Subject  16620  RAGYIETFLGDGQANTDIF  16676

Range 10: 17382 to 17459 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.5 bits(58) 0.0 11/26(42%) 0/26(0%) Minus/Plus
Query      215  KASWTYRLLLCRSFPPCTIMT*QHFT  292
                K  W + L LC+ FPP  +   Q FT
Subject  17382  KWKWMFHL*LCKFFPPYIVTIYQRFT  17459

Range 11: 10151 to 10468 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
208.6 bits(449) 0.0 105/106(99%) 0/106(0%) Plus/Minus
Query      453  KRSARKSATHRHCTTLAK*LLAKFANSLLNAGKRCISD*SALTAPVTEERSLRPYSSKNNL*TIRKSPEHIPKNLRSRKTIPTILNYSCXXXXXXXXXXXFLQNKS  770
                KRSARKSATHRHCTTLAK*LLAKFANSLLNAGKRCISD*SALTAPVTEERSLRPYSSKNNL*TIRKSPEHIPKNLRSRKTIPTILNYSCTITKNKNK*IKFLQ KS
Subject  10151  KRSARKSATHRHCTTLAK*LLAKFANSLLNAGKRCISD*SALTAPVTEERSLRPYSSKNNL*TIRKSPEHIPKNLRSRKTIPTILNYSCTITKNKNK*IKFLQIKS  10468

Range 12: 16619 to 16675 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.1 bits(68) 0.0 14/19(74%) 0/19(0%) Plus/Minus
Query      411  QISVFACPSPKNVQKRSAR  467
                +ISVFACPSPKNV    AR
Subject  16619  KISVFACPSPKNVSM*PAR  16675

Range 13: 17264 to 17443 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.5 bits(58) 0.0 17/60(28%) 0/60(0%) Plus/Minus
Query      231  VIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI  410
                ++ + GGK+LHN +  +H  L ++  * +  +V    S +A+  Q + +  +S L  Q I
Subject  17264  IVTIYGGKNLHNYR*NIHFHLLEQRR*EIFNHVPLRYSRFASQGQSVASTLASRLTYQQI  17443

Range 14: 10159 to 10467 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
196.7 bits(423) 0.0 101/103(98%) 0/103(0%) Minus/Plus
Query      454  FGGI*FICFXXXXXXXXXLV**V*FFCSGDFWVCAPGFSLLFIDYFLRSMVLKTFPQ*RARLVRFNRLYSAFQR*VTS*RISLTVIWRV*CSGDVLRISVLSV  762
                F GI*FICFYSL*LYRSSLV**V*FFCSGDFWVCAPGFSLLFI YFLRSMVLKTFPQ*RARLVRFNRLYSAFQR*VTS*RISLTVIWRV*CSGDVLRISVLSV
Subject  10159  FVGI*FICFYSL*LYRSSLV**V*FFCSGDFWVCAPGFSLLFIGYFLRSMVLKTFPQ*RARLVRFNRLYSAFQR*VTS*RISLTVIWRV*CSGDVLRISVLSV  10467

Range 15: 10152 to 10475 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
191.2 bits(411) 0.0 104/108(96%) 0/108(0%) Plus/Minus
Query      446  RSKTLSTEIRNTSPLHYTRQITVSEIR*LVT*RWKALYKRLKRTNRARH*GKVFKTILLKK*SINNKEKPGAHTQKSPEQXXXXXXXXXXXXXXXE*KQIN*IPPK*I  769
                +SKTLSTEIRNTSPLHYTRQITVSEIR*LVT*RWKALYKRLKRTNRARH*GKVFKTILLKK* INNKEKPGAHTQKSPEQKNYTYYTKLLLYNYKE*KQIN*IP  *I
Subject  10152  KSKTLSTEIRNTSPLHYTRQITVSEIR*LVT*RWKALYKRLKRTNRARH*GKVFKTILLKK*PINNKEKPGAHTQKSPEQKNYTYYTKLLLYNYKE*KQIN*IPTN*I  10475

Range 16: 16638 to 16673 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.9 bits(61) 0.0 12/12(100%) 0/12(0%) Plus/Minus
Query      413  DICIRLPVP*KR  448
                DICIRLPVP*KR
Subject  16638  DICIRLPVP*KR  16673

Nucleotide Sequence (429 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
43
86
129
172
215
258
301
344
387
429

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
323.6 1762.6 38% 8.44e-87 95% NC_004667.1
323.6 1762.6 38% 8.44e-87 95% AF037268.2
323.6 1770.8 38% 8.44e-87 95% GQ352632.1
323.6 1770.8 38% 8.44e-87 95% KX756668.1
323.6 1760.7 38% 8.44e-87 95% KX701860.1

Alignments

Grapevine leafroll associated virus 3, complete genome

Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 8

Range 1: 2079 to 2483 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
323.6 bits(700) 0.0 133/135(99%) 0/135(0%) Plus/Plus
Query        2  KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTYRSLVPSFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAVKPQ  406
                KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTYRSLVPSFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAV+ Q
Subject   2079  KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTYRSLVPSFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAVRSQ  2483

Range 2: 2078 to 2482 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
304.4 bits(658) 0.0 134/135(99%) 0/135(0%) Minus/Minus
Query        1  CGLTAPTAYSNVLFSNVPIVLSA*E*ILSTKSESRTIVLKDTLEPATTGMNTSDLPTNDGTNDLYVTSVPGDF*ALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF  405
                C LTAPTAYSNVLFSNVPIVLSA*E*ILSTKSESRTIVLKDTLEPATTGMNTSDLPTNDGTNDLYVTSVPGDF*ALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF
Subject   2078  CDLTAPTAYSNVLFSNVPIVLSA*E*ILSTKSESRTIVLKDTLEPATTGMNTSDLPTNDGTNDLYVTSVPGDF*ALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF  2482

Range 3: 2080 to 2484 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
301.2 bits(651) 0.0 131/135(97%) 0/135(0%) Plus/Plus
Query        3  RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLMYALRPGTCLS*SMRDTVVVTIISLCVELRSHLELRLRIGRWSRRSWANRWCSYLL*LVLVCPLRQ*SSIRTLSTGSIPTRSIL*EHSRIERLSMPLGRSNRK  407
                RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLMYALRPGTCLS*SMRDTVVVTIISLCV LRSHLELRLRIGRWSRRSWANRWCSYLL*LVLVCPLRQ*SSIRTLSTGSIPTRS L* HSRIERLSMPLGRS RK
Subject   2080  RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLMYALRPGTCLS*SMRDTVVVTIISLCVGLRSHLELRLRIGRWSRRSWANRWCSYLL*LVLVCPLRQ*SSIRTLSTGSIPTRSTL*GHSRIERLSMPLGRSGRK  2484

Range 4: 2079 to 2483 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
290.7 bits(628) 0.0 131/135(97%) 0/135(0%) Minus/Minus
Query        2  LRFDRPNGILKRSILECSYSIERVGIDPVDKVRIEDYCLKGHTRTSYNRYEHQRFAHERRDQRPIRNXXXXXXXXSTHSEMMVTTTVSLIL*LKHVPGRSAYIRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL  406
                LR DRPNGILKRSILEC YS+ERVGIDPVDKVRIEDYCLKGHTRTSYNRYEHQRFAHERRDQRPIRNLSSR*LLS THSEMMVTTTVSLIL*LKHVPGRSAYIRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL
Subject   2079  LRPDRPNGILKRSILECPYSVERVGIDPVDKVRIEDYCLKGHTRTSYNRYEHQRFAHERRDQRPIRNLSSR*LLSPTHSEMMVTTTVSLIL*LKHVPGRSAYIRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL  2483

Range 5: 2078 to 2278 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
157.8 bits(338) 0.0 66/67(99%) 0/67(0%) Plus/Plus
Query        1  EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLCTHFVRERV*ARV*GIPLWLPSSHYV*SSEVTWN  201
                EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLCTHFVRERV*ARV*GIPLWLPSSHYV* SEVTWN
Subject   2078  EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLCTHFVRERV*ARV*GIPLWLPSSHYV*GSEVTWN  2278

Range 6: 2318 to 2485 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
134.4 bits(287) 0.0 53/56(95%) 0/56(0%) Plus/Plus
Query      241  QIAGVHTCCSWF*CVL*DNSPRFGLCRQDLFLRAQYYRNIRE*NV*VCRWGGQTAK  408
                QIAGVHTCCSWF*CVL*DNSPRFGLCRQDLFLRAQ+YR+IRE*NV*VCRWGGQ AK
Subject   2318  QIAGVHTCCSWF*CVL*DNSPRFGLCRQDLFLRAQHYRDIRE*NV*VCRWGGQVAK  2485

Range 7: 2176 to 2484 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
191.2 bits(411) 0.0 99/103(96%) 0/103(0%) Minus/Minus
Query       99  FAV*PPQRHTQTFYSRMFL*Y*ARRNRSCRQSPNRGLLS*RTH*NQLQQV*TPAICXXXXXXXXXXXPQFQVTSELYT**DDGNHNGIPHTLA*TRSRTKCVH  407
                FA *PPQRHTQTFYSRM L* *ARRNRSCRQSPNRGLLS*RTH*NQLQQV*TPAICPRTTGPTTYT*PQFQVTSE YT**DDGNHNGIPHTLA*TRSRTKCVH
Subject   2176  FAT*PPQRHTQTFYSRMSL*C*ARRNRSCRQSPNRGLLS*RTH*NQLQQV*TPAICPRTTGPTTYT*PQFQVTSEPYT**DDGNHNGIPHTLA*TRSRTKCVH  2484

Range 8: 2080 to 2139 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.3 bits(123) 0.0 20/20(100%) 0/20(0%) Minus/Minus
Query        3  NVHTSHHTDQHCRPGNHLPS  62
                NVHTSHHTDQHCRPGNHLPS
Subject   2080  NVHTSHHTDQHCRPGNHLPS  2139

Grapevine leafroll associated virus 3, complete genome

Sequence ID: AF037268.2 Length: 17919 Number of Matches: 8

Range 1: 2079 to 2483 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
323.6 bits(700) 0.0 133/135(99%) 0/135(0%) Plus/Plus
Query        2  KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTYRSLVPSFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAVKPQ  406
                KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTYRSLVPSFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAV+ Q
Subject   2079  KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTYRSLVPSFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAVRSQ  2483

Range 2: 2078 to 2482 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
304.4 bits(658) 0.0 134/135(99%) 0/135(0%) Minus/Minus
Query        1  CGLTAPTAYSNVLFSNVPIVLSA*E*ILSTKSESRTIVLKDTLEPATTGMNTSDLPTNDGTNDLYVTSVPGDF*ALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF  405
                C LTAPTAYSNVLFSNVPIVLSA*E*ILSTKSESRTIVLKDTLEPATTGMNTSDLPTNDGTNDLYVTSVPGDF*ALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF
Subject   2078  CDLTAPTAYSNVLFSNVPIVLSA*E*ILSTKSESRTIVLKDTLEPATTGMNTSDLPTNDGTNDLYVTSVPGDF*ALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF  2482

Range 3: 2080 to 2484 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
301.2 bits(651) 0.0 131/135(97%) 0/135(0%) Plus/Plus
Query        3  RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLMYALRPGTCLS*SMRDTVVVTIISLCVELRSHLELRLRIGRWSRRSWANRWCSYLL*LVLVCPLRQ*SSIRTLSTGSIPTRSIL*EHSRIERLSMPLGRSNRK  407
                RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLMYALRPGTCLS*SMRDTVVVTIISLCV LRSHLELRLRIGRWSRRSWANRWCSYLL*LVLVCPLRQ*SSIRTLSTGSIPTRS L* HSRIERLSMPLGRS RK
Subject   2080  RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLMYALRPGTCLS*SMRDTVVVTIISLCVGLRSHLELRLRIGRWSRRSWANRWCSYLL*LVLVCPLRQ*SSIRTLSTGSIPTRSTL*GHSRIERLSMPLGRSGRK  2484

Range 4: 2079 to 2483 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
290.7 bits(628) 0.0 131/135(97%) 0/135(0%) Minus/Minus
Query        2  LRFDRPNGILKRSILECSYSIERVGIDPVDKVRIEDYCLKGHTRTSYNRYEHQRFAHERRDQRPIRNXXXXXXXXSTHSEMMVTTTVSLIL*LKHVPGRSAYIRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL  406
                LR DRPNGILKRSILEC YS+ERVGIDPVDKVRIEDYCLKGHTRTSYNRYEHQRFAHERRDQRPIRNLSSR*LLS THSEMMVTTTVSLIL*LKHVPGRSAYIRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL
Subject   2079  LRPDRPNGILKRSILECPYSVERVGIDPVDKVRIEDYCLKGHTRTSYNRYEHQRFAHERRDQRPIRNLSSR*LLSPTHSEMMVTTTVSLIL*LKHVPGRSAYIRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL  2483

Range 5: 2078 to 2278 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
157.8 bits(338) 0.0 66/67(99%) 0/67(0%) Plus/Plus
Query        1  EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLCTHFVRERV*ARV*GIPLWLPSSHYV*SSEVTWN  201
                EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLCTHFVRERV*ARV*GIPLWLPSSHYV* SEVTWN
Subject   2078  EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLCTHFVRERV*ARV*GIPLWLPSSHYV*GSEVTWN  2278

Range 6: 2318 to 2485 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
134.4 bits(287) 0.0 53/56(95%) 0/56(0%) Plus/Plus
Query      241  QIAGVHTCCSWF*CVL*DNSPRFGLCRQDLFLRAQYYRNIRE*NV*VCRWGGQTAK  408
                QIAGVHTCCSWF*CVL*DNSPRFGLCRQDLFLRAQ+YR+IRE*NV*VCRWGGQ AK
Subject   2318  QIAGVHTCCSWF*CVL*DNSPRFGLCRQDLFLRAQHYRDIRE*NV*VCRWGGQVAK  2485

Range 7: 2176 to 2484 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
191.2 bits(411) 0.0 99/103(96%) 0/103(0%) Minus/Minus
Query       99  FAV*PPQRHTQTFYSRMFL*Y*ARRNRSCRQSPNRGLLS*RTH*NQLQQV*TPAICXXXXXXXXXXXPQFQVTSELYT**DDGNHNGIPHTLA*TRSRTKCVH  407
                FA *PPQRHTQTFYSRM L* *ARRNRSCRQSPNRGLLS*RTH*NQLQQV*TPAICPRTTGPTTYT*PQFQVTSE YT**DDGNHNGIPHTLA*TRSRTKCVH
Subject   2176  FAT*PPQRHTQTFYSRMSL*C*ARRNRSCRQSPNRGLLS*RTH*NQLQQV*TPAICPRTTGPTTYT*PQFQVTSEPYT**DDGNHNGIPHTLA*TRSRTKCVH  2484

Range 8: 2080 to 2139 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.3 bits(123) 0.0 20/20(100%) 0/20(0%) Minus/Minus
Query        3  NVHTSHHTDQHCRPGNHLPS  62
                NVHTSHHTDQHCRPGNHLPS
Subject   2080  NVHTSHHTDQHCRPGNHLPS  2139

Grapevine leafroll associated virus 3 isolate 623, complete genome

Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 8

Range 1: 2658 to 3062 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
323.6 bits(700) 0.0 133/135(99%) 0/135(0%) Plus/Plus
Query        2  KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTYRSLVPSFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAVKPQ  406
                KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTYRSLVPSFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAV+ Q
Subject   2658  KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTYRSLVPSFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAVRSQ  3062

Range 2: 2657 to 3061 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
304.4 bits(658) 0.0 134/135(99%) 0/135(0%) Minus/Minus
Query        1  CGLTAPTAYSNVLFSNVPIVLSA*E*ILSTKSESRTIVLKDTLEPATTGMNTSDLPTNDGTNDLYVTSVPGDF*ALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF  405
                C LTAPTAYSNVLFSNVPIVLSA*E*ILSTKSESRTIVLKDTLEPATTGMNTSDLPTNDGTNDLYVTSVPGDF*ALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF
Subject   2657  CDLTAPTAYSNVLFSNVPIVLSA*E*ILSTKSESRTIVLKDTLEPATTGMNTSDLPTNDGTNDLYVTSVPGDF*ALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF  3061

Range 3: 2659 to 3063 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
304.4 bits(658) 0.0 132/135(98%) 0/135(0%) Plus/Plus
Query        3  RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLMYALRPGTCLS*SMRDTVVVTIISLCVELRSHLELRLRIGRWSRRSWANRWCSYLL*LVLVCPLRQ*SSIRTLSTGSIPTRSIL*EHSRIERLSMPLGRSNRK  407
                RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLMYALRPGTCLS*SMRDTVVVTIISLCVELRSHLELRLRIGRWSRRSWANRWCSYLL*LVLVCPLRQ*SSIRTLSTGSIPTRS L* HSRIERLSMPLGRS RK
Subject   2659  RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLMYALRPGTCLS*SMRDTVVVTIISLCVELRSHLELRLRIGRWSRRSWANRWCSYLL*LVLVCPLRQ*SSIRTLSTGSIPTRSTL*GHSRIERLSMPLGRSGRK  3063

Range 4: 2658 to 3062 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
290.7 bits(628) 0.0 132/135(98%) 0/135(0%) Minus/Minus
Query        2  LRFDRPNGILKRSILECSYSIERVGIDPVDKVRIEDYCLKGHTRTSYNRYEHQRFAHERRDQRPIRNXXXXXXXXSTHSEMMVTTTVSLIL*LKHVPGRSAYIRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL  406
                LR DRPNGILKRSILEC YS+ERVGIDPVDKVRIEDYCLKGHTRTSYNRYEHQRFAHERRDQRPIRNLSSR*LLSSTHSEMMVTTTVSLIL*LKHVPGRSAYIRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL
Subject   2658  LRPDRPNGILKRSILECPYSVERVGIDPVDKVRIEDYCLKGHTRTSYNRYEHQRFAHERRDQRPIRNLSSR*LLSSTHSEMMVTTTVSLIL*LKHVPGRSAYIRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL  3062

Range 5: 2657 to 2857 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
159.6 bits(342) 0.0 67/67(100%) 0/67(0%) Plus/Plus
Query        1  EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLCTHFVRERV*ARV*GIPLWLPSSHYV*SSEVTWN  201
                EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLCTHFVRERV*ARV*GIPLWLPSSHYV*SSEVTWN
Subject   2657  EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLCTHFVRERV*ARV*GIPLWLPSSHYV*SSEVTWN  2857

Range 6: 2897 to 3064 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
134.4 bits(287) 0.0 53/56(95%) 0/56(0%) Plus/Plus
Query      241  QIAGVHTCCSWF*CVL*DNSPRFGLCRQDLFLRAQYYRNIRE*NV*VCRWGGQTAK  408
                QIAGVHTCCSWF*CVL*DNSPRFGLCRQDLFLRAQ+YR+IRE*NV*VCRWGGQ AK
Subject   2897  QIAGVHTCCSWF*CVL*DNSPRFGLCRQDLFLRAQHYRDIRE*NV*VCRWGGQVAK  3064

Range 7: 2755 to 3063 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.4 bits(418) 0.0 100/103(97%) 0/103(0%) Minus/Minus
Query       99  FAV*PPQRHTQTFYSRMFL*Y*ARRNRSCRQSPNRGLLS*RTH*NQLQQV*TPAICXXXXXXXXXXXPQFQVTSELYT**DDGNHNGIPHTLA*TRSRTKCVH  407
                FA *PPQRHTQTFYSRM L* *ARRNRSCRQSPNRGLLS*RTH*NQLQQV*TPAICPRTTGPTTYT*PQFQVTSELYT**DDGNHNGIPHTLA*TRSRTKCVH
Subject   2755  FAT*PPQRHTQTFYSRMSL*C*ARRNRSCRQSPNRGLLS*RTH*NQLQQV*TPAICPRTTGPTTYT*PQFQVTSELYT**DDGNHNGIPHTLA*TRSRTKCVH  3063

Range 8: 2659 to 2718 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.3 bits(123) 0.0 20/20(100%) 0/20(0%) Minus/Minus
Query        3  NVHTSHHTDQHCRPGNHLPS  62
                NVHTSHHTDQHCRPGNHLPS
Subject   2659  NVHTSHHTDQHCRPGNHLPS  2718

Grapevine leafroll associated virus 3 isolate TC BR, complete genome

Sequence ID: KX756668.1 Length: 18498 Number of Matches: 8

Range 1: 2658 to 3062 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
323.6 bits(700) 0.0 133/135(99%) 0/135(0%) Plus/Plus
Query        2  KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTYRSLVPSFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAVKPQ  406
                KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTYRSLVPSFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAV+ Q
Subject   2658  KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTYRSLVPSFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAVRSQ  3062

Range 2: 2657 to 3061 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
304.4 bits(658) 0.0 134/135(99%) 0/135(0%) Minus/Minus
Query        1  CGLTAPTAYSNVLFSNVPIVLSA*E*ILSTKSESRTIVLKDTLEPATTGMNTSDLPTNDGTNDLYVTSVPGDF*ALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF  405
                C LTAPTAYSNVLFSNVPIVLSA*E*ILSTKSESRTIVLKDTLEPATTGMNTSDLPTNDGTNDLYVTSVPGDF*ALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF
Subject   2657  CDLTAPTAYSNVLFSNVPIVLSA*E*ILSTKSESRTIVLKDTLEPATTGMNTSDLPTNDGTNDLYVTSVPGDF*ALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF  3061

Range 3: 2659 to 3063 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
304.4 bits(658) 0.0 132/135(98%) 0/135(0%) Plus/Plus
Query        3  RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLMYALRPGTCLS*SMRDTVVVTIISLCVELRSHLELRLRIGRWSRRSWANRWCSYLL*LVLVCPLRQ*SSIRTLSTGSIPTRSIL*EHSRIERLSMPLGRSNRK  407
                RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLMYALRPGTCLS*SMRDTVVVTIISLCVELRSHLELRLRIGRWSRRSWANRWCSYLL*LVLVCPLRQ*SSIRTLSTGSIPTRS L* HSRIERLSMPLGRS RK
Subject   2659  RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLMYALRPGTCLS*SMRDTVVVTIISLCVELRSHLELRLRIGRWSRRSWANRWCSYLL*LVLVCPLRQ*SSIRTLSTGSIPTRSTL*GHSRIERLSMPLGRSGRK  3063

Range 4: 2658 to 3062 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
290.7 bits(628) 0.0 132/135(98%) 0/135(0%) Minus/Minus
Query        2  LRFDRPNGILKRSILECSYSIERVGIDPVDKVRIEDYCLKGHTRTSYNRYEHQRFAHERRDQRPIRNXXXXXXXXSTHSEMMVTTTVSLIL*LKHVPGRSAYIRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL  406
                LR DRPNGILKRSILEC YS+ERVGIDPVDKVRIEDYCLKGHTRTSYNRYEHQRFAHERRDQRPIRNLSSR*LLSSTHSEMMVTTTVSLIL*LKHVPGRSAYIRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL
Subject   2658  LRPDRPNGILKRSILECPYSVERVGIDPVDKVRIEDYCLKGHTRTSYNRYEHQRFAHERRDQRPIRNLSSR*LLSSTHSEMMVTTTVSLIL*LKHVPGRSAYIRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL  3062

Range 5: 2657 to 2857 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
159.6 bits(342) 0.0 67/67(100%) 0/67(0%) Plus/Plus
Query        1  EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLCTHFVRERV*ARV*GIPLWLPSSHYV*SSEVTWN  201
                EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLCTHFVRERV*ARV*GIPLWLPSSHYV*SSEVTWN
Subject   2657  EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLCTHFVRERV*ARV*GIPLWLPSSHYV*SSEVTWN  2857

Range 6: 2897 to 3064 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
134.4 bits(287) 0.0 53/56(95%) 0/56(0%) Plus/Plus
Query      241  QIAGVHTCCSWF*CVL*DNSPRFGLCRQDLFLRAQYYRNIRE*NV*VCRWGGQTAK  408
                QIAGVHTCCSWF*CVL*DNSPRFGLCRQDLFLRAQ+YR+IRE*NV*VCRWGGQ AK
Subject   2897  QIAGVHTCCSWF*CVL*DNSPRFGLCRQDLFLRAQHYRDIRE*NV*VCRWGGQVAK  3064

Range 7: 2755 to 3063 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.4 bits(418) 0.0 100/103(97%) 0/103(0%) Minus/Minus
Query       99  FAV*PPQRHTQTFYSRMFL*Y*ARRNRSCRQSPNRGLLS*RTH*NQLQQV*TPAICXXXXXXXXXXXPQFQVTSELYT**DDGNHNGIPHTLA*TRSRTKCVH  407
                FA *PPQRHTQTFYSRM L* *ARRNRSCRQSPNRGLLS*RTH*NQLQQV*TPAICPRTTGPTTYT*PQFQVTSELYT**DDGNHNGIPHTLA*TRSRTKCVH
Subject   2755  FAT*PPQRHTQTFYSRMSL*C*ARRNRSCRQSPNRGLLS*RTH*NQLQQV*TPAICPRTTGPTTYT*PQFQVTSELYT**DDGNHNGIPHTLA*TRSRTKCVH  3063

Range 8: 2659 to 2718 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.3 bits(123) 0.0 20/20(100%) 0/20(0%) Minus/Minus
Query        3  NVHTSHHTDQHCRPGNHLPS  62
                NVHTSHHTDQHCRPGNHLPS
Subject   2659  NVHTSHHTDQHCRPGNHLPS  2718

Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome

Sequence ID: KX701860.1 Length: 18020 Number of Matches: 8

Range 1: 2176 to 2580 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
323.6 bits(700) 0.0 133/135(99%) 0/135(0%) Plus/Plus
Query        2  KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTYRSLVPSFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAVKPQ  406
                KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTYRSLVPSFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAV+ Q
Subject   2176  KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTYRSLVPSFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAVRSQ  2580

Range 2: 2175 to 2579 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
304.4 bits(658) 0.0 134/135(99%) 0/135(0%) Minus/Minus
Query        1  CGLTAPTAYSNVLFSNVPIVLSA*E*ILSTKSESRTIVLKDTLEPATTGMNTSDLPTNDGTNDLYVTSVPGDF*ALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF  405
                C LTAPTAYSNVLFSNVPIVLSA*E*ILSTKSESRTIVLKDTLEPATTGMNTSDLPTNDGTNDLYVTSVPGDF*ALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF
Subject   2175  CDLTAPTAYSNVLFSNVPIVLSA*E*ILSTKSESRTIVLKDTLEPATTGMNTSDLPTNDGTNDLYVTSVPGDF*ALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF  2579

Range 3: 2177 to 2581 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
302.6 bits(654) 0.0 131/135(97%) 0/135(0%) Plus/Plus
Query        3  RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLMYALRPGTCLS*SMRDTVVVTIISLCVELRSHLELRLRIGRWSRRSWANRWCSYLL*LVLVCPLRQ*SSIRTLSTGSIPTRSIL*EHSRIERLSMPLGRSNRK  407
                RGKVITWPTMLVSV RCMNIPSLT*AGFSPFLMYALRPGTCLS*SMRDTVVVTIISLCVELRSHLELRLRIGRWSRRSWANRWCSYLL*LVLVCPLRQ*SSIRTLSTGSIPTRS L* HSRIERLSMPLGRS RK
Subject   2177  RGKVITWPTMLVSVARCMNIPSLT*AGFSPFLMYALRPGTCLS*SMRDTVVVTIISLCVELRSHLELRLRIGRWSRRSWANRWCSYLL*LVLVCPLRQ*SSIRTLSTGSIPTRSTL*GHSRIERLSMPLGRSGRK  2581

Range 4: 2176 to 2580 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
288.4 bits(623) 0.0 131/135(97%) 0/135(0%) Minus/Minus
Query        2  LRFDRPNGILKRSILECSYSIERVGIDPVDKVRIEDYCLKGHTRTSYNRYEHQRFAHERRDQRPIRNXXXXXXXXSTHSEMMVTTTVSLIL*LKHVPGRSAYIRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL  406
                LR DRPNGILKRSILEC YS+ERVGIDPVDKVRIEDYCLKGHTRTSYNRYEHQRFAHERRDQRPIRNLSSR*LLSSTHSEMMVTTTVSLIL*LKHVPGRSAYIRKGEKPAYVREGMFIHL TLTNIVGQVITFPL
Subject   2176  LRPDRPNGILKRSILECPYSVERVGIDPVDKVRIEDYCLKGHTRTSYNRYEHQRFAHERRDQRPIRNLSSR*LLSSTHSEMMVTTTVSLIL*LKHVPGRSAYIRKGEKPAYVREGMFIHLATLTNIVGQVITFPL  2580

Range 5: 2175 to 2375 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
157.3 bits(337) 0.0 66/67(99%) 0/67(0%) Plus/Plus
Query        1  EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLCTHFVRERV*ARV*GIPLWLPSSHYV*SSEVTWN  201
                EEGR*LPGLQCWSVW DV*TFLL*RKRVFHLFLCTHFVRERV*ARV*GIPLWLPSSHYV*SSEVTWN
Subject   2175  EEGR*LPGLQCWSVWRDV*TFLL*RKRVFHLFLCTHFVRERV*ARV*GIPLWLPSSHYV*SSEVTWN  2375

Range 6: 2415 to 2582 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
134.4 bits(287) 0.0 53/56(95%) 0/56(0%) Plus/Plus
Query      241  QIAGVHTCCSWF*CVL*DNSPRFGLCRQDLFLRAQYYRNIRE*NV*VCRWGGQTAK  408
                QIAGVHTCCSWF*CVL*DNSPRFGLCRQDLFLRAQ+YR+IRE*NV*VCRWGGQ AK
Subject   2415  QIAGVHTCCSWF*CVL*DNSPRFGLCRQDLFLRAQHYRDIRE*NV*VCRWGGQVAK  2582

Range 7: 2273 to 2581 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.4 bits(418) 0.0 100/103(97%) 0/103(0%) Minus/Minus
Query       99  FAV*PPQRHTQTFYSRMFL*Y*ARRNRSCRQSPNRGLLS*RTH*NQLQQV*TPAICXXXXXXXXXXXPQFQVTSELYT**DDGNHNGIPHTLA*TRSRTKCVH  407
                FA *PPQRHTQTFYSRM L* *ARRNRSCRQSPNRGLLS*RTH*NQLQQV*TPAICPRTTGPTTYT*PQFQVTSELYT**DDGNHNGIPHTLA*TRSRTKCVH
Subject   2273  FAT*PPQRHTQTFYSRMSL*C*ARRNRSCRQSPNRGLLS*RTH*NQLQQV*TPAICPRTTGPTTYT*PQFQVTSELYT**DDGNHNGIPHTLA*TRSRTKCVH  2581

Range 8: 2177 to 2236 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.6 bits(115) 0.0 19/20(95%) 0/20(0%) Minus/Minus
Query        3  NVHTSHHTDQHCRPGNHLPS  62
                NVHTS HTDQHCRPGNHLPS
Subject   2177  NVHTSRHTDQHCRPGNHLPS  2236

Nucleotide Sequence (101 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Alignments

Grapevine leafroll associated virus 3 isolate 3138 07, complete genome

Sequence ID: JX559645.1 Length: 18498 Number of Matches: 6

Range 1: 7182 to 7280 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.3 bits(195) 0.0 33/33(100%) 0/33(0%) Minus/Minus
Query        2  LFSE*GVIGLLRPKQYHITECFSLCFMHCHHWC  100
                LFSE*GVIGLLRPKQYHITECFSLCFMHCHHWC
Subject   7182  LFSE*GVIGLLRPKQYHITECFSLCFMHCHHWC  7280

Range 2: 7183 to 7281 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
85.8 bits(181) 0.0 32/33(97%) 0/33(0%) Plus/Plus
Query        3  HQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNS  101
                HQ**QCMKHREKHSVMWYCLGRRRPMTPYSLN+
Subject   7183  HQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNN  7281

Range 3: 7184 to 7279 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.9 bits(168) 0.0 32/32(100%) 0/32(0%) Minus/Minus
Query        4  CLVNRESSAFFVLNNTTSLNVFPCASCTVITG  99
                CLVNRESSAFFVLNNTTSLNVFPCASCTVITG
Subject   7184  CLVNRESSAFFVLNNTTSLNVFPCASCTVITG  7279

Range 4: 7185 to 7280 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
77.1 bits(162) 0.0 32/32(100%) 0/32(0%) Plus/Plus
Query        5  PVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQ  100
                PVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQ
Subject   7185  PVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQ  7280

Range 5: 7183 to 7278 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.6 bits(150) 0.0 32/32(100%) 0/32(0%) Minus/Minus
Query        3  V**IGSHRPSSS*TIPHH*MFFPVLHALSSLV  98
                V**IGSHRPSSS*TIPHH*MFFPVLHALSSLV
Subject   7183  V**IGSHRPSSS*TIPHH*MFFPVLHALSSLV  7278

Range 6: 7181 to 7279 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.7 bits(148) 0.0 32/33(97%) 0/33(0%) Plus/Plus
Query        1  STSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*T  99
                +TSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*T
Subject   7181  NTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*T  7279

Grapevine leafroll associated virus 3 isolate 621, complete genome

Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 6

Range 1: 7182 to 7280 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.3 bits(195) 0.0 33/33(100%) 0/33(0%) Minus/Minus
Query        2  LFSE*GVIGLLRPKQYHITECFSLCFMHCHHWC  100
                LFSE*GVIGLLRPKQYHITECFSLCFMHCHHWC
Subject   7182  LFSE*GVIGLLRPKQYHITECFSLCFMHCHHWC  7280

Range 2: 7183 to 7281 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
85.8 bits(181) 0.0 32/33(97%) 0/33(0%) Plus/Plus
Query        3  HQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNS  101
                HQ**QCMKHREKHSVMWYCLGRRRPMTPYSLN+
Subject   7183  HQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNN  7281

Range 3: 7184 to 7279 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.9 bits(168) 0.0 32/32(100%) 0/32(0%) Minus/Minus
Query        4  CLVNRESSAFFVLNNTTSLNVFPCASCTVITG  99
                CLVNRESSAFFVLNNTTSLNVFPCASCTVITG
Subject   7184  CLVNRESSAFFVLNNTTSLNVFPCASCTVITG  7279

Range 4: 7185 to 7280 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
77.1 bits(162) 0.0 32/32(100%) 0/32(0%) Plus/Plus
Query        5  PVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQ  100
                PVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQ
Subject   7185  PVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQ  7280

Range 5: 7183 to 7278 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.6 bits(150) 0.0 32/32(100%) 0/32(0%) Minus/Minus
Query        3  V**IGSHRPSSS*TIPHH*MFFPVLHALSSLV  98
                V**IGSHRPSSS*TIPHH*MFFPVLHALSSLV
Subject   7183  V**IGSHRPSSS*TIPHH*MFFPVLHALSSLV  7278

Range 6: 7181 to 7279 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.7 bits(148) 0.0 32/33(97%) 0/33(0%) Plus/Plus
Query        1  STSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*T  99
                +TSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*T
Subject   7181  NTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*T  7279

Grapevine leafroll associated virus 3 isolate WA MR, complete genome

Sequence ID: GU983863.1 Length: 18498 Number of Matches: 6

Range 1: 7182 to 7280 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.3 bits(195) 0.0 33/33(100%) 0/33(0%) Minus/Minus
Query        2  LFSE*GVIGLLRPKQYHITECFSLCFMHCHHWC  100
                LFSE*GVIGLLRPKQYHITECFSLCFMHCHHWC
Subject   7182  LFSE*GVIGLLRPKQYHITECFSLCFMHCHHWC  7280

Range 2: 7183 to 7281 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
85.8 bits(181) 0.0 32/33(97%) 0/33(0%) Plus/Plus
Query        3  HQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNS  101
                HQ**QCMKHREKHSVMWYCLGRRRPMTPYSLN+
Subject   7183  HQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNN  7281

Range 3: 7184 to 7279 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.9 bits(168) 0.0 32/32(100%) 0/32(0%) Minus/Minus
Query        4  CLVNRESSAFFVLNNTTSLNVFPCASCTVITG  99
                CLVNRESSAFFVLNNTTSLNVFPCASCTVITG
Subject   7184  CLVNRESSAFFVLNNTTSLNVFPCASCTVITG  7279

Range 4: 7185 to 7280 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
77.1 bits(162) 0.0 32/32(100%) 0/32(0%) Plus/Plus
Query        5  PVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQ  100
                PVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQ
Subject   7185  PVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQ  7280

Range 5: 7183 to 7278 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.6 bits(150) 0.0 32/32(100%) 0/32(0%) Minus/Minus
Query        3  V**IGSHRPSSS*TIPHH*MFFPVLHALSSLV  98
                V**IGSHRPSSS*TIPHH*MFFPVLHALSSLV
Subject   7183  V**IGSHRPSSS*TIPHH*MFFPVLHALSSLV  7278

Range 6: 7181 to 7279 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.7 bits(148) 0.0 32/33(97%) 0/33(0%) Plus/Plus
Query        1  STSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*T  99
                +TSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*T
Subject   7181  NTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*T  7279

Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome

Sequence ID: KX756669.1 Length: 18313 Number of Matches: 6

Range 1: 6997 to 7095 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.3 bits(195) 0.0 33/33(100%) 0/33(0%) Minus/Minus
Query        2  LFSE*GVIGLLRPKQYHITECFSLCFMHCHHWC  100
                LFSE*GVIGLLRPKQYHITECFSLCFMHCHHWC
Subject   6997  LFSE*GVIGLLRPKQYHITECFSLCFMHCHHWC  7095

Range 2: 6998 to 7096 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
85.8 bits(181) 0.0 32/33(97%) 0/33(0%) Plus/Plus
Query        3  HQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNS  101
                HQ**QCMKHREKHSVMWYCLGRRRPMTPYSLN+
Subject   6998  HQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNN  7096

Range 3: 6999 to 7094 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.9 bits(168) 0.0 32/32(100%) 0/32(0%) Minus/Minus
Query        4  CLVNRESSAFFVLNNTTSLNVFPCASCTVITG  99
                CLVNRESSAFFVLNNTTSLNVFPCASCTVITG
Subject   6999  CLVNRESSAFFVLNNTTSLNVFPCASCTVITG  7094

Range 4: 7000 to 7095 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
77.1 bits(162) 0.0 32/32(100%) 0/32(0%) Plus/Plus
Query        5  PVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQ  100
                PVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQ
Subject   7000  PVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQ  7095

Range 5: 6998 to 7093 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.6 bits(150) 0.0 32/32(100%) 0/32(0%) Minus/Minus
Query        3  V**IGSHRPSSS*TIPHH*MFFPVLHALSSLV  98
                V**IGSHRPSSS*TIPHH*MFFPVLHALSSLV
Subject   6998  V**IGSHRPSSS*TIPHH*MFFPVLHALSSLV  7093

Range 6: 6996 to 7094 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.7 bits(148) 0.0 32/33(97%) 0/33(0%) Plus/Plus
Query        1  STSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*T  99
                +TSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*T
Subject   6996  NTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*T  7094

Grapevine leafroll associated virus 3 isolate Cl 766, complete genome

Sequence ID: EU344893.1 Length: 17919 Number of Matches: 6

Range 1: 6603 to 6701 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.3 bits(193) 0.0 32/33(97%) 0/33(0%) Minus/Minus
Query        2  LFSE*GVIGLLRPKQYHITECFSLCFMHCHHWC  100
                LFSE*GVIG+LRPKQYHITECFSLCFMHCHHWC
Subject   6603  LFSE*GVIGILRPKQYHITECFSLCFMHCHHWC  6701

Range 2: 6604 to 6702 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.1 bits(175) 0.0 31/33(94%) 0/33(0%) Plus/Plus
Query        3  HQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNS  101
                HQ**QCMKHREKHSVMWYCLGRR PMTPYSLN+
Subject   6604  HQ**QCMKHREKHSVMWYCLGRRMPMTPYSLNN  6702

Range 3: 6605 to 6700 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.9 bits(168) 0.0 32/32(100%) 0/32(0%) Minus/Minus
Query        4  CLVNRESSAFFVLNNTTSLNVFPCASCTVITG  99
                CLVNRESSAFFVLNNTTSLNVFPCASCTVITG
Subject   6605  CLVNRESSAFFVLNNTTSLNVFPCASCTVITG  6700

Range 4: 6606 to 6701 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
74.8 bits(157) 0.0 31/32(97%) 0/32(0%) Plus/Plus
Query        5  PVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQ  100
                PVMTVHEAQGKTFSDVVLFRTK ADDSLFTKQ
Subject   6606  PVMTVHEAQGKTFSDVVLFRTKNADDSLFTKQ  6701

Range 5: 6604 to 6699 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.5 bits(141) 0.0 31/32(97%) 0/32(0%) Minus/Minus
Query        3  V**IGSHRPSSS*TIPHH*MFFPVLHALSSLV  98
                V**IGSHR SSS*TIPHH*MFFPVLHALSSLV
Subject   6604  V**IGSHRHSSS*TIPHH*MFFPVLHALSSLV  6699

Range 6: 6602 to 6700 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
66.6 bits(139) 0.0 31/33(94%) 0/33(0%) Plus/Plus
Query        1  STSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*T  99
                +TSDDSA*STGKNIQ*CGIV*DEE R*LPIH*T
Subject   6602  NTSDDSA*STGKNIQ*CGIV*DEECR*LPIH*T  6700

Nucleotide Sequence (315 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
32
64
96
128
160
192
224
256
288
315

Descriptions

Alignments

Grapevine leafroll associated virus 3 isolate 3138 07, complete genome

Sequence ID: JX559645.1 Length: 18498 Number of Matches: 6

Range 1: 11189 to 11503 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
245.3 bits(529) 0.0 105/105(100%) 0/105(0%) Minus/Minus
Query        1  TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAV  315
                TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAV
Subject  11189  TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAV  11503

Range 2: 11190 to 11501 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
239.3 bits(516) 0.0 104/104(100%) 0/104(0%) Plus/Plus
Query        2  TAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG  313
                TAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG
Subject  11190  TAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG  11501

Range 3: 11189 to 11503 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
227.4 bits(490) 0.0 100/105(95%) 0/105(0%) Plus/Plus
Query        1  DSRSPLFLS*VASRRPIISGFRLWGRNFRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC  315
                D RSPLFLS*VASRRPIISGF  WGR+FRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKD RKGV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC
Subject  11189  DGRSPLFLS*VASRRPIISGF*FWGRDFRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKD*RKGV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC  11503

Range 4: 11194 to 11502 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
226.0 bits(487) 0.0 100/103(97%) 0/103(0%) Minus/Minus
Query        6  HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRKFLPQSRKPLIIGLLLAT*LRNRGLR  314
                HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRK LPQ++KPLIIGLLLAT*LRNRGLR
Subject  11194  HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRKSLPQNQKPLIIGLLLAT*LRNRGLR  11502

Range 5: 11193 to 11501 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
225.1 bits(485) 0.0 99/103(96%) 0/103(0%) Minus/Minus
Query        5  TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCG  313
                TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSF+LLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DVES SPK++NR***VFYSRLS*GIEGCG
Subject  11193  TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFNLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DVESPSPKIKNR***VFYSRLS*GIEGCG  11501

Range 6: 11191 to 11502 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
223.3 bits(481) 0.0 99/104(95%) 0/104(0%) Plus/Plus
Query        3  QPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV  314
                +PQPSIP*LSRE*KTYY*RF  LGE LSTSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKR KERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV
Subject  11191  RPQPSIP*LSRE*KTYY*RFLILGEGLSTSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRLKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV  11502

Grapevine leafroll associated virus 3, complete genome

Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 6

Range 1: 10610 to 10924 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
245.3 bits(529) 0.0 105/105(100%) 0/105(0%) Minus/Minus
Query        1  TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAV  315
                TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAV
Subject  10610  TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAV  10924

Range 2: 10611 to 10922 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
239.3 bits(516) 0.0 104/104(100%) 0/104(0%) Plus/Plus
Query        2  TAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG  313
                TAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG
Subject  10611  TAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG  10922

Range 3: 10610 to 10924 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
231.5 bits(499) 0.0 101/105(96%) 0/105(0%) Plus/Plus
Query        1  DSRSPLFLS*VASRRPIISGFRLWGRNFRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC  315
                D RSPLFLS*VASRRPIISGF  WGR+FRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC
Subject  10610  DGRSPLFLS*VASRRPIISGF*FWGRDFRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC  10924

Range 4: 10614 to 10922 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
227.4 bits(490) 0.0 100/103(97%) 0/103(0%) Minus/Minus
Query        5  TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCG  313
                TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DVES SPK++NR***VFYSRLS*GIEGCG
Subject  10614  TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DVESPSPKIKNR***VFYSRLS*GIEGCG  10922

Range 5: 10615 to 10923 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
226.0 bits(487) 0.0 100/103(97%) 0/103(0%) Minus/Minus
Query        6  HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRKFLPQSRKPLIIGLLLAT*LRNRGLR  314
                HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRK LPQ++KPLIIGLLLAT*LRNRGLR
Subject  10615  HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRKSLPQNQKPLIIGLLLAT*LRNRGLR  10923

Range 6: 10612 to 10923 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
226.0 bits(487) 0.0 100/104(96%) 0/104(0%) Plus/Plus
Query        3  QPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV  314
                +PQPSIP*LSRE*KTYY*RF  LGE LSTSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV
Subject  10612  RPQPSIP*LSRE*KTYY*RFLILGEGLSTSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV  10923

Grapevine leafroll associated virus 3 isolate D 42 heat shock protein 70 like protein (HSP70) gene, partial cds

Sequence ID: KP866975.1 Length: 1140 Number of Matches: 6

Range 1: 247 to 561 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
245.3 bits(529) 0.0 105/105(100%) 0/105(0%) Minus/Minus
Query        1  TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAV  315
                TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAV
Subject    247  TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAV  561

Range 2: 248 to 559 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
239.3 bits(516) 0.0 104/104(100%) 0/104(0%) Plus/Plus
Query        2  TAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG  313
                TAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG
Subject    248  TAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG  559

Range 3: 247 to 561 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
229.7 bits(495) 0.0 100/105(95%) 0/105(0%) Plus/Plus
Query        1  DSRSPLFLS*VASRRPIISGFRLWGRNFRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC  315
                D RSPLFLS*VASRRPIISGF  WGR+FRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGR V*Q*RYNATPYPRRRGC
Subject    247  DGRSPLFLS*VASRRPIISGF*FWGRDFRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRFV*Q*RYNATPYPRRRGC  561

Range 4: 251 to 559 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
227.0 bits(489) 0.0 99/103(96%) 0/103(0%) Minus/Minus
Query        5  TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCG  313
                TPFYGDKVLRYSVIVRQ+FLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DVES SPK++NR***VFYSRLS*GIEGCG
Subject    251  TPFYGDKVLRYSVIVRQIFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DVESPSPKIKNR***VFYSRLS*GIEGCG  559

Range 5: 252 to 560 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
224.7 bits(484) 0.0 99/103(96%) 0/103(0%) Minus/Minus
Query        6  HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRKFLPQSRKPLIIGLLLAT*LRNRGLR  314
                HPLLRG*GVAL*RYC*T+LPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRK LPQ++KPLIIGLLLAT*LRNRGLR
Subject    252  HPLLRG*GVAL*RYC*TNLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRKSLPQNQKPLIIGLLLAT*LRNRGLR  560

Range 6: 249 to 560 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
223.3 bits(481) 0.0 99/104(95%) 0/104(0%) Plus/Plus
Query        3  QPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV  314
                +PQPSIP*LSRE*KTYY*RF  LGE LSTSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RK CLTITL*RNTLSP*KGV
Subject    249  RPQPSIP*LSRE*KTYY*RFLILGEGLSTSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKICLTITL*RNTLSP*KGV  560

Grapevine leafroll associated virus 3 isolate DA 68 heat shock protein 70 like protein (HSP70) gene, partial cds

Sequence ID: KP866976.1 Length: 1140 Number of Matches: 6

Range 1: 247 to 561 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
245.3 bits(529) 0.0 105/105(100%) 0/105(0%) Minus/Minus
Query        1  TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAV  315
                TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAV
Subject    247  TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAV  561

Range 2: 248 to 559 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
239.3 bits(516) 0.0 104/104(100%) 0/104(0%) Plus/Plus
Query        2  TAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG  313
                TAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG
Subject    248  TAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG  559

Range 3: 247 to 561 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
231.5 bits(499) 0.0 101/105(96%) 0/105(0%) Plus/Plus
Query        1  DSRSPLFLS*VASRRPIISGFRLWGRNFRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC  315
                D RSPLFLS*VASRRPIISGF  WGR+FRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC
Subject    247  DGRSPLFLS*VASRRPIISGF*FWGRDFRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC  561

Range 4: 251 to 559 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
227.4 bits(490) 0.0 100/103(97%) 0/103(0%) Minus/Minus
Query        5  TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCG  313
                TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DVES SPK++NR***VFYSRLS*GIEGCG
Subject    251  TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DVESPSPKIKNR***VFYSRLS*GIEGCG  559

Range 5: 249 to 560 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
226.0 bits(487) 0.0 100/104(96%) 0/104(0%) Plus/Plus
Query        3  QPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV  314
                +PQPSIP*LSRE*KTYY*RF  LGE LSTSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV
Subject    249  RPQPSIP*LSRE*KTYY*RFLILGEGLSTSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV  560

Range 6: 252 to 560 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
226.0 bits(487) 0.0 100/103(97%) 0/103(0%) Minus/Minus
Query        6  HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRKFLPQSRKPLIIGLLLAT*LRNRGLR  314
                HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRK LPQ++KPLIIGLLLAT*LRNRGLR
Subject    252  HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRKSLPQNQKPLIIGLLLAT*LRNRGLR  560

Grapevine leafroll associated virus 3 isolate DA 69 heat shock protein 70 like protein (HSP70) gene, partial cds

Sequence ID: KP866977.1 Length: 1140 Number of Matches: 6

Range 1: 247 to 561 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
245.3 bits(529) 0.0 105/105(100%) 0/105(0%) Minus/Minus
Query        1  TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAV  315
                TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAV
Subject    247  TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAV  561

Range 2: 248 to 559 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
239.3 bits(516) 0.0 104/104(100%) 0/104(0%) Plus/Plus
Query        2  TAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG  313
                TAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG
Subject    248  TAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG  559

Range 3: 247 to 561 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
231.5 bits(499) 0.0 101/105(96%) 0/105(0%) Plus/Plus
Query        1  DSRSPLFLS*VASRRPIISGFRLWGRNFRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC  315
                D RSPLFLS*VASRRPIISGF  WGR+FRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC
Subject    247  DGRSPLFLS*VASRRPIISGF*FWGRDFRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC  561

Range 4: 251 to 559 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
227.4 bits(490) 0.0 100/103(97%) 0/103(0%) Minus/Minus
Query        5  TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCG  313
                TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DVES SPK++NR***VFYSRLS*GIEGCG
Subject    251  TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DVESPSPKIKNR***VFYSRLS*GIEGCG  559

Range 5: 249 to 560 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
226.0 bits(487) 0.0 100/104(96%) 0/104(0%) Plus/Plus
Query        3  QPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV  314
                +PQPSIP*LSRE*KTYY*RF  LGE LSTSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV
Subject    249  RPQPSIP*LSRE*KTYY*RFLILGEGLSTSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV  560

Range 6: 252 to 560 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
226.0 bits(487) 0.0 100/103(97%) 0/103(0%) Minus/Minus
Query        6  HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRKFLPQSRKPLIIGLLLAT*LRNRGLR  314
                HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRK LPQ++KPLIIGLLLAT*LRNRGLR
Subject    252  HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRKSLPQNQKPLIIGLLLAT*LRNRGLR  560

Nucleotide Sequence (435 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
44
88
132
176
220
264
308
352
396
435

Descriptions

Alignments

Grapevine leafroll associated virus 3 isolate 3 3 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130283.1 Length: 4711 Number of Matches: 8

Range 1: 3013 to 3408 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
296.2 bits(640) 0.0 131/132(99%) 0/132(0%) Minus/Plus
Query        8  AGY*MI*SGKRATRKNLRGETY*IPTSYRLITQGLNEVTFAPLSYLEVVKVA*NERSPGFDTYKGSAYKLLQRLFYR*ECRTKRLSRKYREFSHSQV*FAKLLPCHEGLDH*YSL*GDDRNS*KLYRRLNTR  403
                AGY*MI*SGKRATRKNLRGETY*IPTSYRLITQGLNEVTFAPLSYLEVVKVA*NERSPGFDTYKGSAYKLLQRLFYR*ECRTKRLSRKYREFSHSQV*FAKLLP HEGLDH*YSL*GDDRNS*KLYRRLNTR
Subject   3013  AGY*MI*SGKRATRKNLRGETY*IPTSYRLITQGLNEVTFAPLSYLEVVKVA*NERSPGFDTYKGSAYKLLQRLFYR*ECRTKRLSRKYREFSHSQV*FAKLLPRHEGLDH*YSL*GDDRNS*KLYRRLNTR  3408

Range 2: 3012 to 3410 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
284.2 bits(614) 0.0 130/133(98%) 0/133(0%) Minus/Plus
Query        6  CGILNDLKWEESNKEKFKGRDILDTYILSSDYPGFK*GYFRSAILS*GCQSRLKRTITWF*YL*RKRL*TITTPLLPMRVPY*ATFAKV*GIFS*PGVVRKTPAVS*RP*SLI*SVR*R*KQLEALSET*YSS  404
                CGILNDLKWEESNKEKFKGRDILDTYILSSDYPGFK*GYFRSAILS*GCQSRLKRTITWF*YL*RKRL*TITTPLLPMRVPY*AT AKV*GIFS*PGVVRKTPA S*RP*SLI*SVR R*KQLEALSET*YSS
Subject   3012  CGILNDLKWEESNKEKFKGRDILDTYILSSDYPGFK*GYFRSAILS*GCQSRLKRTITWF*YL*RKRL*TITTPLLPMRVPY*ATLAKV*GIFS*PGVVRKTPAAS*RP*SLI*SVRRR*KQLEALSET*YSS  3410

Range 3: 3007 to 3192 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.0 bits(308) 0.0 62/62(100%) 0/62(0%) Plus/Minus
Query      224  KTR*SFVLSDFDNLKIR*RSESNLI*TLGNQTIRCRYLICLSP*IFPCCSLPTSNHSISRTT  409
                KTR*SFVLSDFDNLKIR*RSESNLI*TLGNQTIRCRYLICLSP*IFPCCSLPTSNHSISRTT
Subject   3007  KTR*SFVLSDFDNLKIR*RSESNLI*TLGNQTIRCRYLICLSP*IFPCCSLPTSNHSISRTT  3192

Range 4: 3226 to 3408 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
129.8 bits(277) 0.0 59/61(97%) 0/61(0%) Plus/Minus
Query        8  TSIKSPIKLLAVSIVTLQTILVIKAFMTRQEFCELHLAMRKFPILSRKSLSTALSSVKEAL  190
                TSIKSPIKLLAVSIV LQTILVIKAFMTRQEFCELHLAMRKFPILSR+SLSTALSSVKEAL
Subject   3226  TSIKSPIKLLAVSIVALQTILVIKAFMTRQEFCELHLAMRKFPILSRESLSTALSSVKEAL  3408

Range 5: 3083 to 3412 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
248.5 bits(536) 0.0 106/110(96%) 0/110(0%) Plus/Minus
Query        4  ADEY*VSDKASSCFYRHLTDYISDQGLHDTAGVLRTTPGYEKIPYTFAKVA*YGTLIGKRGVVIVYKRFLYKYQNQVIVRFKRL*QPQDKIAERK*PHLNPG*SDDKM*V  333
                +DEY*VSDKASSCFYR LTDYISDQGLHD AGVLRTTPGYEKIPYTFA+VA*YGTLIGKRGVVIVYKRFLYKYQNQVIVRFKRL*QPQDKIAERK*PHLNPG*SDDKM*V
Subject   3083  SDEY*VSDKASSCFYRRLTDYISDQGLHDAAGVLRTTPGYEKIPYTFARVA*YGTLIGKRGVVIVYKRFLYKYQNQVIVRFKRL*QPQDKIAERK*PHLNPG*SDDKM*V  3412

Range 6: 3170 to 3409 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
178.9 bits(384) 0.0 78/80(98%) 0/80(0%) Minus/Plus
Query        7  KTNDHLVLILIKEALINYYNASFTDESAVLSDFRESIGNFLIARCSSQNSCRVMKALITNIVCKVTIETARSFIGDLILV  246
                KTNDHLVLILIKEALINYYNASFTDESAVLSD RESIGNFLIARCSSQNSCRVMKALITNIVCK TIETARSFIGDLILV
Subject   3170  KTNDHLVLILIKEALINYYNASFTDESAVLSDSRESIGNFLIARCSSQNSCRVMKALITNIVCKATIETARSFIGDLILV  3409

Range 7: 3008 to 3121 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.0 bits(177) 0.0 38/38(100%) 0/38(0%) Minus/Plus
Query      295  VVRDIE*FEVGREQQGKI*GERHIRYLHLIV*LPRV*M  408
                VVRDIE*FEVGREQQGKI*GERHIRYLHLIV*LPRV*M
Subject   3008  VVRDIE*FEVGREQQGKI*GERHIRYLHLIV*LPRV*M  3121

Range 8: 3012 to 3329 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
236.1 bits(509) 0.0 105/106(99%) 0/106(0%) Plus/Minus
Query       87  *HGRSFANYTWL*ENSLYFRESRLVRHSHR*KRRCNSL*ALPL*VSKPGDRSF*ATLTTSR*DSGAKVTSFKPWVIRR*DVGI*YVSPLKFFLVALFPLQIIQYPA  404
                * GRSFANYTWL*ENSLYFRESRLVRHSHR*KRRCNSL*ALPL*VSKPGDRSF*ATLTTSR*DSGAKVTSFKPWVIRR*DVGI*YVSPLKFFLVALFPLQIIQYPA
Subject   3012  *RGRSFANYTWL*ENSLYFRESRLVRHSHR*KRRCNSL*ALPL*VSKPGDRSF*ATLTTSR*DSGAKVTSFKPWVIRR*DVGI*YVSPLKFFLVALFPLQIIQYPA  3329

Grapevine leafroll associated virus 3 isolate 3 5 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130284.1 Length: 4711 Number of Matches: 8

Range 1: 3013 to 3408 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
296.2 bits(640) 0.0 131/132(99%) 0/132(0%) Minus/Plus
Query        8  AGY*MI*SGKRATRKNLRGETY*IPTSYRLITQGLNEVTFAPLSYLEVVKVA*NERSPGFDTYKGSAYKLLQRLFYR*ECRTKRLSRKYREFSHSQV*FAKLLPCHEGLDH*YSL*GDDRNS*KLYRRLNTR  403
                AGY*MI*SGKRATRKNLRGETY*IPTSYRLITQGLNEVTFAPLSYLEVVKVA*NERSPGFDTYKGSAYKLLQRLFYR*ECRTKRLSRKYREFSHSQV*FAKLLP HEGLDH*YSL*GDDRNS*KLYRRLNTR
Subject   3013  AGY*MI*SGKRATRKNLRGETY*IPTSYRLITQGLNEVTFAPLSYLEVVKVA*NERSPGFDTYKGSAYKLLQRLFYR*ECRTKRLSRKYREFSHSQV*FAKLLPRHEGLDH*YSL*GDDRNS*KLYRRLNTR  3408

Range 2: 3012 to 3410 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
284.2 bits(614) 0.0 130/133(98%) 0/133(0%) Minus/Plus
Query        6  CGILNDLKWEESNKEKFKGRDILDTYILSSDYPGFK*GYFRSAILS*GCQSRLKRTITWF*YL*RKRL*TITTPLLPMRVPY*ATFAKV*GIFS*PGVVRKTPAVS*RP*SLI*SVR*R*KQLEALSET*YSS  404
                CGILNDLKWEESNKEKFKGRDILDTYILSSDYPGFK*GYFRSAILS*GCQSRLKRTITWF*YL*RKRL*TITTPLLPMRVPY*AT AKV*GIFS*PGVVRKTPA S*RP*SLI*SVR R*KQLEALSET*YSS
Subject   3012  CGILNDLKWEESNKEKFKGRDILDTYILSSDYPGFK*GYFRSAILS*GCQSRLKRTITWF*YL*RKRL*TITTPLLPMRVPY*ATLAKV*GIFS*PGVVRKTPAAS*RP*SLI*SVRRR*KQLEALSET*YSS  3410

Range 3: 3007 to 3192 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.0 bits(308) 0.0 62/62(100%) 0/62(0%) Plus/Minus
Query      224  KTR*SFVLSDFDNLKIR*RSESNLI*TLGNQTIRCRYLICLSP*IFPCCSLPTSNHSISRTT  409
                KTR*SFVLSDFDNLKIR*RSESNLI*TLGNQTIRCRYLICLSP*IFPCCSLPTSNHSISRTT
Subject   3007  KTR*SFVLSDFDNLKIR*RSESNLI*TLGNQTIRCRYLICLSP*IFPCCSLPTSNHSISRTT  3192

Range 4: 3226 to 3408 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
129.8 bits(277) 0.0 59/61(97%) 0/61(0%) Plus/Minus
Query        8  TSIKSPIKLLAVSIVTLQTILVIKAFMTRQEFCELHLAMRKFPILSRKSLSTALSSVKEAL  190
                TSIKSPIKLLAVSIV LQTILVIKAFMTRQEFCELHLAMRKFPILSR+SLSTALSSVKEAL
Subject   3226  TSIKSPIKLLAVSIVALQTILVIKAFMTRQEFCELHLAMRKFPILSRESLSTALSSVKEAL  3408

Range 5: 3083 to 3412 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
248.5 bits(536) 0.0 106/110(96%) 0/110(0%) Plus/Minus
Query        4  ADEY*VSDKASSCFYRHLTDYISDQGLHDTAGVLRTTPGYEKIPYTFAKVA*YGTLIGKRGVVIVYKRFLYKYQNQVIVRFKRL*QPQDKIAERK*PHLNPG*SDDKM*V  333
                +DEY*VSDKASSCFYR LTDYISDQGLHD AGVLRTTPGYEKIPYTFA+VA*YGTLIGKRGVVIVYKRFLYKYQNQVIVRFKRL*QPQDKIAERK*PHLNPG*SDDKM*V
Subject   3083  SDEY*VSDKASSCFYRRLTDYISDQGLHDAAGVLRTTPGYEKIPYTFARVA*YGTLIGKRGVVIVYKRFLYKYQNQVIVRFKRL*QPQDKIAERK*PHLNPG*SDDKM*V  3412

Range 6: 3170 to 3409 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
178.9 bits(384) 0.0 78/80(98%) 0/80(0%) Minus/Plus
Query        7  KTNDHLVLILIKEALINYYNASFTDESAVLSDFRESIGNFLIARCSSQNSCRVMKALITNIVCKVTIETARSFIGDLILV  246
                KTNDHLVLILIKEALINYYNASFTDESAVLSD RESIGNFLIARCSSQNSCRVMKALITNIVCK TIETARSFIGDLILV
Subject   3170  KTNDHLVLILIKEALINYYNASFTDESAVLSDSRESIGNFLIARCSSQNSCRVMKALITNIVCKATIETARSFIGDLILV  3409

Range 7: 3008 to 3121 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.0 bits(177) 0.0 38/38(100%) 0/38(0%) Minus/Plus
Query      295  VVRDIE*FEVGREQQGKI*GERHIRYLHLIV*LPRV*M  408
                VVRDIE*FEVGREQQGKI*GERHIRYLHLIV*LPRV*M
Subject   3008  VVRDIE*FEVGREQQGKI*GERHIRYLHLIV*LPRV*M  3121

Range 8: 3012 to 3329 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
236.1 bits(509) 0.0 105/106(99%) 0/106(0%) Plus/Minus
Query       87  *HGRSFANYTWL*ENSLYFRESRLVRHSHR*KRRCNSL*ALPL*VSKPGDRSF*ATLTTSR*DSGAKVTSFKPWVIRR*DVGI*YVSPLKFFLVALFPLQIIQYPA  404
                * GRSFANYTWL*ENSLYFRESRLVRHSHR*KRRCNSL*ALPL*VSKPGDRSF*ATLTTSR*DSGAKVTSFKPWVIRR*DVGI*YVSPLKFFLVALFPLQIIQYPA
Subject   3012  *RGRSFANYTWL*ENSLYFRESRLVRHSHR*KRRCNSL*ALPL*VSKPGDRSF*ATLTTSR*DSGAKVTSFKPWVIRR*DVGI*YVSPLKFFLVALFPLQIIQYPA  3329

Grapevine leafroll associated virus 3 isolate 3 7 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130285.1 Length: 4711 Number of Matches: 8

Range 1: 3013 to 3408 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
296.2 bits(640) 0.0 131/132(99%) 0/132(0%) Minus/Plus
Query        8  AGY*MI*SGKRATRKNLRGETY*IPTSYRLITQGLNEVTFAPLSYLEVVKVA*NERSPGFDTYKGSAYKLLQRLFYR*ECRTKRLSRKYREFSHSQV*FAKLLPCHEGLDH*YSL*GDDRNS*KLYRRLNTR  403
                AGY*MI*SGKRATRKNLRGETY*IPTSYRLITQGLNEVTFAPLSYLEVVKVA*NERSPGFDTYKGSAYKLLQRLFYR*ECRTKRLSRKYREFSHSQV*FAKLLP HEGLDH*YSL*GDDRNS*KLYRRLNTR
Subject   3013  AGY*MI*SGKRATRKNLRGETY*IPTSYRLITQGLNEVTFAPLSYLEVVKVA*NERSPGFDTYKGSAYKLLQRLFYR*ECRTKRLSRKYREFSHSQV*FAKLLPRHEGLDH*YSL*GDDRNS*KLYRRLNTR  3408

Range 2: 3012 to 3410 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
284.2 bits(614) 0.0 130/133(98%) 0/133(0%) Minus/Plus
Query        6  CGILNDLKWEESNKEKFKGRDILDTYILSSDYPGFK*GYFRSAILS*GCQSRLKRTITWF*YL*RKRL*TITTPLLPMRVPY*ATFAKV*GIFS*PGVVRKTPAVS*RP*SLI*SVR*R*KQLEALSET*YSS  404
                CGILNDLKWEESNKEKFKGRDILDTYILSSDYPGFK*GYFRSAILS*GCQSRLKRTITWF*YL*RKRL*TITTPLLPMRVPY*AT AKV*GIFS*PGVVRKTPA S*RP*SLI*SVR R*KQLEALSET*YSS
Subject   3012  CGILNDLKWEESNKEKFKGRDILDTYILSSDYPGFK*GYFRSAILS*GCQSRLKRTITWF*YL*RKRL*TITTPLLPMRVPY*ATLAKV*GIFS*PGVVRKTPAAS*RP*SLI*SVRRR*KQLEALSET*YSS  3410

Range 3: 3007 to 3192 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.0 bits(308) 0.0 62/62(100%) 0/62(0%) Plus/Minus
Query      224  KTR*SFVLSDFDNLKIR*RSESNLI*TLGNQTIRCRYLICLSP*IFPCCSLPTSNHSISRTT  409
                KTR*SFVLSDFDNLKIR*RSESNLI*TLGNQTIRCRYLICLSP*IFPCCSLPTSNHSISRTT
Subject   3007  KTR*SFVLSDFDNLKIR*RSESNLI*TLGNQTIRCRYLICLSP*IFPCCSLPTSNHSISRTT  3192

Range 4: 3226 to 3408 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
129.8 bits(277) 0.0 59/61(97%) 0/61(0%) Plus/Minus
Query        8  TSIKSPIKLLAVSIVTLQTILVIKAFMTRQEFCELHLAMRKFPILSRKSLSTALSSVKEAL  190
                TSIKSPIKLLAVSIV LQTILVIKAFMTRQEFCELHLAMRKFPILSR+SLSTALSSVKEAL
Subject   3226  TSIKSPIKLLAVSIVALQTILVIKAFMTRQEFCELHLAMRKFPILSRESLSTALSSVKEAL  3408

Range 5: 3083 to 3412 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
248.5 bits(536) 0.0 106/110(96%) 0/110(0%) Plus/Minus
Query        4  ADEY*VSDKASSCFYRHLTDYISDQGLHDTAGVLRTTPGYEKIPYTFAKVA*YGTLIGKRGVVIVYKRFLYKYQNQVIVRFKRL*QPQDKIAERK*PHLNPG*SDDKM*V  333
                +DEY*VSDKASSCFYR LTDYISDQGLHD AGVLRTTPGYEKIPYTFA+VA*YGTLIGKRGVVIVYKRFLYKYQNQVIVRFKRL*QPQDKIAERK*PHLNPG*SDDKM*V
Subject   3083  SDEY*VSDKASSCFYRRLTDYISDQGLHDAAGVLRTTPGYEKIPYTFARVA*YGTLIGKRGVVIVYKRFLYKYQNQVIVRFKRL*QPQDKIAERK*PHLNPG*SDDKM*V  3412

Range 6: 3170 to 3409 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
178.9 bits(384) 0.0 78/80(98%) 0/80(0%) Minus/Plus
Query        7  KTNDHLVLILIKEALINYYNASFTDESAVLSDFRESIGNFLIARCSSQNSCRVMKALITNIVCKVTIETARSFIGDLILV  246
                KTNDHLVLILIKEALINYYNASFTDESAVLSD RESIGNFLIARCSSQNSCRVMKALITNIVCK TIETARSFIGDLILV
Subject   3170  KTNDHLVLILIKEALINYYNASFTDESAVLSDSRESIGNFLIARCSSQNSCRVMKALITNIVCKATIETARSFIGDLILV  3409

Range 7: 3008 to 3121 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.0 bits(177) 0.0 38/38(100%) 0/38(0%) Minus/Plus
Query      295  VVRDIE*FEVGREQQGKI*GERHIRYLHLIV*LPRV*M  408
                VVRDIE*FEVGREQQGKI*GERHIRYLHLIV*LPRV*M
Subject   3008  VVRDIE*FEVGREQQGKI*GERHIRYLHLIV*LPRV*M  3121

Range 8: 3012 to 3329 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
236.1 bits(509) 0.0 105/106(99%) 0/106(0%) Plus/Minus
Query       87  *HGRSFANYTWL*ENSLYFRESRLVRHSHR*KRRCNSL*ALPL*VSKPGDRSF*ATLTTSR*DSGAKVTSFKPWVIRR*DVGI*YVSPLKFFLVALFPLQIIQYPA  404
                * GRSFANYTWL*ENSLYFRESRLVRHSHR*KRRCNSL*ALPL*VSKPGDRSF*ATLTTSR*DSGAKVTSFKPWVIRR*DVGI*YVSPLKFFLVALFPLQIIQYPA
Subject   3012  *RGRSFANYTWL*ENSLYFRESRLVRHSHR*KRRCNSL*ALPL*VSKPGDRSF*ATLTTSR*DSGAKVTSFKPWVIRR*DVGI*YVSPLKFFLVALFPLQIIQYPA  3329

Grapevine leafroll associated virus 3 isolate 3 8 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130286.1 Length: 4711 Number of Matches: 8

Range 1: 3013 to 3408 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
296.2 bits(640) 0.0 131/132(99%) 0/132(0%) Minus/Plus
Query        8  AGY*MI*SGKRATRKNLRGETY*IPTSYRLITQGLNEVTFAPLSYLEVVKVA*NERSPGFDTYKGSAYKLLQRLFYR*ECRTKRLSRKYREFSHSQV*FAKLLPCHEGLDH*YSL*GDDRNS*KLYRRLNTR  403
                AGY*MI*SGKRATRKNLRGETY*IPTSYRLITQGLNEVTFAPLSYLEVVKVA*NERSPGFDTYKGSAYKLLQRLFYR*ECRTKRLSRKYREFSHSQV*FAKLLP HEGLDH*YSL*GDDRNS*KLYRRLNTR
Subject   3013  AGY*MI*SGKRATRKNLRGETY*IPTSYRLITQGLNEVTFAPLSYLEVVKVA*NERSPGFDTYKGSAYKLLQRLFYR*ECRTKRLSRKYREFSHSQV*FAKLLPRHEGLDH*YSL*GDDRNS*KLYRRLNTR  3408

Range 2: 3012 to 3410 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
284.2 bits(614) 0.0 130/133(98%) 0/133(0%) Minus/Plus
Query        6  CGILNDLKWEESNKEKFKGRDILDTYILSSDYPGFK*GYFRSAILS*GCQSRLKRTITWF*YL*RKRL*TITTPLLPMRVPY*ATFAKV*GIFS*PGVVRKTPAVS*RP*SLI*SVR*R*KQLEALSET*YSS  404
                CGILNDLKWEESNKEKFKGRDILDTYILSSDYPGFK*GYFRSAILS*GCQSRLKRTITWF*YL*RKRL*TITTPLLPMRVPY*AT AKV*GIFS*PGVVRKTPA S*RP*SLI*SVR R*KQLEALSET*YSS
Subject   3012  CGILNDLKWEESNKEKFKGRDILDTYILSSDYPGFK*GYFRSAILS*GCQSRLKRTITWF*YL*RKRL*TITTPLLPMRVPY*ATLAKV*GIFS*PGVVRKTPAAS*RP*SLI*SVRRR*KQLEALSET*YSS  3410

Range 3: 3007 to 3192 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.0 bits(308) 0.0 62/62(100%) 0/62(0%) Plus/Minus
Query      224  KTR*SFVLSDFDNLKIR*RSESNLI*TLGNQTIRCRYLICLSP*IFPCCSLPTSNHSISRTT  409
                KTR*SFVLSDFDNLKIR*RSESNLI*TLGNQTIRCRYLICLSP*IFPCCSLPTSNHSISRTT
Subject   3007  KTR*SFVLSDFDNLKIR*RSESNLI*TLGNQTIRCRYLICLSP*IFPCCSLPTSNHSISRTT  3192

Range 4: 3226 to 3408 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
129.8 bits(277) 0.0 59/61(97%) 0/61(0%) Plus/Minus
Query        8  TSIKSPIKLLAVSIVTLQTILVIKAFMTRQEFCELHLAMRKFPILSRKSLSTALSSVKEAL  190
                TSIKSPIKLLAVSIV LQTILVIKAFMTRQEFCELHLAMRKFPILSR+SLSTALSSVKEAL
Subject   3226  TSIKSPIKLLAVSIVALQTILVIKAFMTRQEFCELHLAMRKFPILSRESLSTALSSVKEAL  3408

Range 5: 3083 to 3412 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
248.5 bits(536) 0.0 106/110(96%) 0/110(0%) Plus/Minus
Query        4  ADEY*VSDKASSCFYRHLTDYISDQGLHDTAGVLRTTPGYEKIPYTFAKVA*YGTLIGKRGVVIVYKRFLYKYQNQVIVRFKRL*QPQDKIAERK*PHLNPG*SDDKM*V  333
                +DEY*VSDKASSCFYR LTDYISDQGLHD AGVLRTTPGYEKIPYTFA+VA*YGTLIGKRGVVIVYKRFLYKYQNQVIVRFKRL*QPQDKIAERK*PHLNPG*SDDKM*V
Subject   3083  SDEY*VSDKASSCFYRRLTDYISDQGLHDAAGVLRTTPGYEKIPYTFARVA*YGTLIGKRGVVIVYKRFLYKYQNQVIVRFKRL*QPQDKIAERK*PHLNPG*SDDKM*V  3412

Range 6: 3170 to 3409 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
178.9 bits(384) 0.0 78/80(98%) 0/80(0%) Minus/Plus
Query        7  KTNDHLVLILIKEALINYYNASFTDESAVLSDFRESIGNFLIARCSSQNSCRVMKALITNIVCKVTIETARSFIGDLILV  246
                KTNDHLVLILIKEALINYYNASFTDESAVLSD RESIGNFLIARCSSQNSCRVMKALITNIVCK TIETARSFIGDLILV
Subject   3170  KTNDHLVLILIKEALINYYNASFTDESAVLSDSRESIGNFLIARCSSQNSCRVMKALITNIVCKATIETARSFIGDLILV  3409

Range 7: 3008 to 3121 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.0 bits(177) 0.0 38/38(100%) 0/38(0%) Minus/Plus
Query      295  VVRDIE*FEVGREQQGKI*GERHIRYLHLIV*LPRV*M  408
                VVRDIE*FEVGREQQGKI*GERHIRYLHLIV*LPRV*M
Subject   3008  VVRDIE*FEVGREQQGKI*GERHIRYLHLIV*LPRV*M  3121

Range 8: 3012 to 3329 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
236.1 bits(509) 0.0 105/106(99%) 0/106(0%) Plus/Minus
Query       87  *HGRSFANYTWL*ENSLYFRESRLVRHSHR*KRRCNSL*ALPL*VSKPGDRSF*ATLTTSR*DSGAKVTSFKPWVIRR*DVGI*YVSPLKFFLVALFPLQIIQYPA  404
                * GRSFANYTWL*ENSLYFRESRLVRHSHR*KRRCNSL*ALPL*VSKPGDRSF*ATLTTSR*DSGAKVTSFKPWVIRR*DVGI*YVSPLKFFLVALFPLQIIQYPA
Subject   3012  *RGRSFANYTWL*ENSLYFRESRLVRHSHR*KRRCNSL*ALPL*VSKPGDRSF*ATLTTSR*DSGAKVTSFKPWVIRR*DVGI*YVSPLKFFLVALFPLQIIQYPA  3329

Grapevine leafroll associated virus 3 isolate 3 13 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130288.1 Length: 4711 Number of Matches: 8

Range 1: 3013 to 3408 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
296.2 bits(640) 0.0 131/132(99%) 0/132(0%) Minus/Plus
Query        8  AGY*MI*SGKRATRKNLRGETY*IPTSYRLITQGLNEVTFAPLSYLEVVKVA*NERSPGFDTYKGSAYKLLQRLFYR*ECRTKRLSRKYREFSHSQV*FAKLLPCHEGLDH*YSL*GDDRNS*KLYRRLNTR  403
                AGY*MI*SGKRATRKNLRGETY*IPTSYRLITQGLNEVTFAPLSYLEVVKVA*NERSPGFDTYKGSAYKLLQRLFYR*ECRTKRLSRKYREFSHSQV*FAKLLP HEGLDH*YSL*GDDRNS*KLYRRLNTR
Subject   3013  AGY*MI*SGKRATRKNLRGETY*IPTSYRLITQGLNEVTFAPLSYLEVVKVA*NERSPGFDTYKGSAYKLLQRLFYR*ECRTKRLSRKYREFSHSQV*FAKLLPRHEGLDH*YSL*GDDRNS*KLYRRLNTR  3408

Range 2: 3012 to 3410 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
284.2 bits(614) 0.0 130/133(98%) 0/133(0%) Minus/Plus
Query        6  CGILNDLKWEESNKEKFKGRDILDTYILSSDYPGFK*GYFRSAILS*GCQSRLKRTITWF*YL*RKRL*TITTPLLPMRVPY*ATFAKV*GIFS*PGVVRKTPAVS*RP*SLI*SVR*R*KQLEALSET*YSS  404
                CGILNDLKWEESNKEKFKGRDILDTYILSSDYPGFK*GYFRSAILS*GCQSRLKRTITWF*YL*RKRL*TITTPLLPMRVPY*AT AKV*GIFS*PGVVRKTPA S*RP*SLI*SVR R*KQLEALSET*YSS
Subject   3012  CGILNDLKWEESNKEKFKGRDILDTYILSSDYPGFK*GYFRSAILS*GCQSRLKRTITWF*YL*RKRL*TITTPLLPMRVPY*ATLAKV*GIFS*PGVVRKTPAAS*RP*SLI*SVRRR*KQLEALSET*YSS  3410

Range 3: 3007 to 3192 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.0 bits(308) 0.0 62/62(100%) 0/62(0%) Plus/Minus
Query      224  KTR*SFVLSDFDNLKIR*RSESNLI*TLGNQTIRCRYLICLSP*IFPCCSLPTSNHSISRTT  409
                KTR*SFVLSDFDNLKIR*RSESNLI*TLGNQTIRCRYLICLSP*IFPCCSLPTSNHSISRTT
Subject   3007  KTR*SFVLSDFDNLKIR*RSESNLI*TLGNQTIRCRYLICLSP*IFPCCSLPTSNHSISRTT  3192

Range 4: 3226 to 3408 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
129.8 bits(277) 0.0 59/61(97%) 0/61(0%) Plus/Minus
Query        8  TSIKSPIKLLAVSIVTLQTILVIKAFMTRQEFCELHLAMRKFPILSRKSLSTALSSVKEAL  190
                TSIKSPIKLLAVSIV LQTILVIKAFMTRQEFCELHLAMRKFPILSR+SLSTALSSVKEAL
Subject   3226  TSIKSPIKLLAVSIVALQTILVIKAFMTRQEFCELHLAMRKFPILSRESLSTALSSVKEAL  3408

Range 5: 3083 to 3412 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
248.5 bits(536) 0.0 106/110(96%) 0/110(0%) Plus/Minus
Query        4  ADEY*VSDKASSCFYRHLTDYISDQGLHDTAGVLRTTPGYEKIPYTFAKVA*YGTLIGKRGVVIVYKRFLYKYQNQVIVRFKRL*QPQDKIAERK*PHLNPG*SDDKM*V  333
                +DEY*VSDKASSCFYR LTDYISDQGLHD AGVLRTTPGYEKIPYTFA+VA*YGTLIGKRGVVIVYKRFLYKYQNQVIVRFKRL*QPQDKIAERK*PHLNPG*SDDKM*V
Subject   3083  SDEY*VSDKASSCFYRRLTDYISDQGLHDAAGVLRTTPGYEKIPYTFARVA*YGTLIGKRGVVIVYKRFLYKYQNQVIVRFKRL*QPQDKIAERK*PHLNPG*SDDKM*V  3412

Range 6: 3170 to 3409 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
178.9 bits(384) 0.0 78/80(98%) 0/80(0%) Minus/Plus
Query        7  KTNDHLVLILIKEALINYYNASFTDESAVLSDFRESIGNFLIARCSSQNSCRVMKALITNIVCKVTIETARSFIGDLILV  246
                KTNDHLVLILIKEALINYYNASFTDESAVLSD RESIGNFLIARCSSQNSCRVMKALITNIVCK TIETARSFIGDLILV
Subject   3170  KTNDHLVLILIKEALINYYNASFTDESAVLSDSRESIGNFLIARCSSQNSCRVMKALITNIVCKATIETARSFIGDLILV  3409

Range 7: 3008 to 3121 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.0 bits(177) 0.0 38/38(100%) 0/38(0%) Minus/Plus
Query      295  VVRDIE*FEVGREQQGKI*GERHIRYLHLIV*LPRV*M  408
                VVRDIE*FEVGREQQGKI*GERHIRYLHLIV*LPRV*M
Subject   3008  VVRDIE*FEVGREQQGKI*GERHIRYLHLIV*LPRV*M  3121

Range 8: 3012 to 3329 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
236.1 bits(509) 0.0 105/106(99%) 0/106(0%) Plus/Minus
Query       87  *HGRSFANYTWL*ENSLYFRESRLVRHSHR*KRRCNSL*ALPL*VSKPGDRSF*ATLTTSR*DSGAKVTSFKPWVIRR*DVGI*YVSPLKFFLVALFPLQIIQYPA  404
                * GRSFANYTWL*ENSLYFRESRLVRHSHR*KRRCNSL*ALPL*VSKPGDRSF*ATLTTSR*DSGAKVTSFKPWVIRR*DVGI*YVSPLKFFLVALFPLQIIQYPA
Subject   3012  *RGRSFANYTWL*ENSLYFRESRLVRHSHR*KRRCNSL*ALPL*VSKPGDRSF*ATLTTSR*DSGAKVTSFKPWVIRR*DVGI*YVSPLKFFLVALFPLQIIQYPA  3329

Nucleotide Sequence (132 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
14
28
42
56
70
84
98
112
126
132

Descriptions

Alignments

Grapevine leafroll associated virus 3 isolate 6 6 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130295.1 Length: 4711 Number of Matches: 6

Range 1: 3535 to 3663 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
108.3 bits(230) 0.0 42/43(98%) 0/43(0%) Minus/Minus
Query        2  SMML*PRDEISKCCSTFPPPCLPTQTSFKESTRPNPRFSPDKI  130
                SMML*PRDEISKCCSTFPPPCLPTQTSFKEST PNPRFSPDKI
Subject   3535  SMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI  3663

Range 2: 3534 to 3665 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.7 bits(209) 0.0 42/44(95%) 0/44(0%) Minus/Minus
Query        1  GP*CFNLEMRLVSAVVRFHLLVYLRKLASRNLRAPILDSPQTKY  132
                GP*CFN EMRLVSAVVRFHLLVYLRKLASRNLR PILDSPQTKY
Subject   3534  GP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY  3665

Range 3: 3534 to 3665 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.7 bits(209) 0.0 43/44(98%) 0/44(0%) Plus/Plus
Query        1  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHL*VKASWT  132
                IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHL VKASWT
Subject   3534  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWT  3665

Range 4: 3536 to 3664 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
95.5 bits(202) 0.0 42/43(98%) 0/43(0%) Plus/Plus
Query        3  ILSGENRGLGRVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMD  131
                ILSGENRGLG VDSLKLVCVGRQGGGNVLQHLLISSLG*SIMD
Subject   3536  ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMD  3664

Range 5: 3536 to 3664 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
88.1 bits(186) 0.0 42/43(98%) 0/43(0%) Minus/Minus
Query        3  VHDALT*R*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQN  131
                VHDALT R*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQN
Subject   3536  VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQN  3664

Range 6: 3535 to 3663 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.5 bits(141) 0.0 41/43(95%) 0/43(0%) Plus/Plus
Query        2  YFVWGESRIGARRFLEASLXXXXXXXXXXXALTNLISRLKHHG  130
                YFVWGESRIG RRFLEASLRR*TRRWKRTTALTNLIS LKHHG
Subject   3535  YFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHG  3663

Grapevine leafroll associated virus 3 isolate 6 11 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130297.1 Length: 4711 Number of Matches: 6

Range 1: 3535 to 3663 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
108.3 bits(230) 0.0 42/43(98%) 0/43(0%) Minus/Minus
Query        2  SMML*PRDEISKCCSTFPPPCLPTQTSFKESTRPNPRFSPDKI  130
                SMML*PRDEISKCCSTFPPPCLPTQTSFKEST PNPRFSPDKI
Subject   3535  SMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI  3663

Range 2: 3534 to 3665 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.7 bits(209) 0.0 42/44(95%) 0/44(0%) Minus/Minus
Query        1  GP*CFNLEMRLVSAVVRFHLLVYLRKLASRNLRAPILDSPQTKY  132
                GP*CFN EMRLVSAVVRFHLLVYLRKLASRNLR PILDSPQTKY
Subject   3534  GP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY  3665

Range 3: 3534 to 3665 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.7 bits(209) 0.0 43/44(98%) 0/44(0%) Plus/Plus
Query        1  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHL*VKASWT  132
                IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHL VKASWT
Subject   3534  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWT  3665

Range 4: 3536 to 3664 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
95.5 bits(202) 0.0 42/43(98%) 0/43(0%) Plus/Plus
Query        3  ILSGENRGLGRVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMD  131
                ILSGENRGLG VDSLKLVCVGRQGGGNVLQHLLISSLG*SIMD
Subject   3536  ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMD  3664

Range 5: 3536 to 3664 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
88.1 bits(186) 0.0 42/43(98%) 0/43(0%) Minus/Minus
Query        3  VHDALT*R*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQN  131
                VHDALT R*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQN
Subject   3536  VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQN  3664

Range 6: 3535 to 3663 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.5 bits(141) 0.0 41/43(95%) 0/43(0%) Plus/Plus
Query        2  YFVWGESRIGARRFLEASLXXXXXXXXXXXALTNLISRLKHHG  130
                YFVWGESRIG RRFLEASLRR*TRRWKRTTALTNLIS LKHHG
Subject   3535  YFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHG  3663

Grapevine leafroll associated virus 3 isolate 6 18 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130300.1 Length: 4711 Number of Matches: 6

Range 1: 3535 to 3663 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
108.3 bits(230) 0.0 42/43(98%) 0/43(0%) Minus/Minus
Query        2  SMML*PRDEISKCCSTFPPPCLPTQTSFKESTRPNPRFSPDKI  130
                SMML*PRDEISKCCSTFPPPCLPTQTSFKEST PNPRFSPDKI
Subject   3535  SMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI  3663

Range 2: 3534 to 3665 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.7 bits(209) 0.0 42/44(95%) 0/44(0%) Minus/Minus
Query        1  GP*CFNLEMRLVSAVVRFHLLVYLRKLASRNLRAPILDSPQTKY  132
                GP*CFN EMRLVSAVVRFHLLVYLRKLASRNLR PILDSPQTKY
Subject   3534  GP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY  3665

Range 3: 3534 to 3665 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.7 bits(209) 0.0 43/44(98%) 0/44(0%) Plus/Plus
Query        1  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHL*VKASWT  132
                IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHL VKASWT
Subject   3534  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWT  3665

Range 4: 3536 to 3664 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
95.5 bits(202) 0.0 42/43(98%) 0/43(0%) Plus/Plus
Query        3  ILSGENRGLGRVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMD  131
                ILSGENRGLG VDSLKLVCVGRQGGGNVLQHLLISSLG*SIMD
Subject   3536  ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMD  3664

Range 5: 3536 to 3664 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
88.1 bits(186) 0.0 42/43(98%) 0/43(0%) Minus/Minus
Query        3  VHDALT*R*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQN  131
                VHDALT R*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQN
Subject   3536  VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQN  3664

Range 6: 3535 to 3663 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.5 bits(141) 0.0 41/43(95%) 0/43(0%) Plus/Plus
Query        2  YFVWGESRIGARRFLEASLXXXXXXXXXXXALTNLISRLKHHG  130
                YFVWGESRIG RRFLEASLRR*TRRWKRTTALTNLIS LKHHG
Subject   3535  YFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHG  3663

Grapevine leafroll associated virus 3 isolate 6 102 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130301.1 Length: 4711 Number of Matches: 6

Range 1: 3535 to 3663 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
108.3 bits(230) 0.0 42/43(98%) 0/43(0%) Minus/Minus
Query        2  SMML*PRDEISKCCSTFPPPCLPTQTSFKESTRPNPRFSPDKI  130
                SMML*PRDEISKCCSTFPPPCLPTQTSFKEST PNPRFSPDKI
Subject   3535  SMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI  3663

Range 2: 3534 to 3665 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.7 bits(209) 0.0 42/44(95%) 0/44(0%) Minus/Minus
Query        1  GP*CFNLEMRLVSAVVRFHLLVYLRKLASRNLRAPILDSPQTKY  132
                GP*CFN EMRLVSAVVRFHLLVYLRKLASRNLR PILDSPQTKY
Subject   3534  GP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY  3665

Range 3: 3534 to 3665 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.7 bits(209) 0.0 43/44(98%) 0/44(0%) Plus/Plus
Query        1  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHL*VKASWT  132
                IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHL VKASWT
Subject   3534  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWT  3665

Range 4: 3536 to 3664 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
95.5 bits(202) 0.0 42/43(98%) 0/43(0%) Plus/Plus
Query        3  ILSGENRGLGRVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMD  131
                ILSGENRGLG VDSLKLVCVGRQGGGNVLQHLLISSLG*SIMD
Subject   3536  ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMD  3664

Range 5: 3536 to 3664 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
88.1 bits(186) 0.0 42/43(98%) 0/43(0%) Minus/Minus
Query        3  VHDALT*R*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQN  131
                VHDALT R*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQN
Subject   3536  VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQN  3664

Range 6: 3535 to 3663 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.5 bits(141) 0.0 41/43(95%) 0/43(0%) Plus/Plus
Query        2  YFVWGESRIGARRFLEASLXXXXXXXXXXXALTNLISRLKHHG  130
                YFVWGESRIG RRFLEASLRR*TRRWKRTTALTNLIS LKHHG
Subject   3535  YFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHG  3663

Grapevine leafroll associated virus 3 isolate 6 114 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130303.1 Length: 4711 Number of Matches: 6

Range 1: 3535 to 3663 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
108.3 bits(230) 0.0 42/43(98%) 0/43(0%) Minus/Minus
Query        2  SMML*PRDEISKCCSTFPPPCLPTQTSFKESTRPNPRFSPDKI  130
                SMML*PRDEISKCCSTFPPPCLPTQTSFKEST PNPRFSPDKI
Subject   3535  SMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI  3663

Range 2: 3534 to 3665 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.7 bits(209) 0.0 42/44(95%) 0/44(0%) Minus/Minus
Query        1  GP*CFNLEMRLVSAVVRFHLLVYLRKLASRNLRAPILDSPQTKY  132
                GP*CFN EMRLVSAVVRFHLLVYLRKLASRNLR PILDSPQTKY
Subject   3534  GP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY  3665

Range 3: 3534 to 3665 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.7 bits(209) 0.0 43/44(98%) 0/44(0%) Plus/Plus
Query        1  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHL*VKASWT  132
                IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHL VKASWT
Subject   3534  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWT  3665

Range 4: 3536 to 3664 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
95.5 bits(202) 0.0 42/43(98%) 0/43(0%) Plus/Plus
Query        3  ILSGENRGLGRVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMD  131
                ILSGENRGLG VDSLKLVCVGRQGGGNVLQHLLISSLG*SIMD
Subject   3536  ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMD  3664

Range 5: 3536 to 3664 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
88.1 bits(186) 0.0 42/43(98%) 0/43(0%) Minus/Minus
Query        3  VHDALT*R*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQN  131
                VHDALT R*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQN
Subject   3536  VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQN  3664

Range 6: 3535 to 3663 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.5 bits(141) 0.0 41/43(95%) 0/43(0%) Plus/Plus
Query        2  YFVWGESRIGARRFLEASLXXXXXXXXXXXALTNLISRLKHHG  130
                YFVWGESRIG RRFLEASLRR*TRRWKRTTALTNLIS LKHHG
Subject   3535  YFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHG  3663

Nucleotide Sequence (1118 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
112
224
336
448
560
672
784
896
1008
1118

Descriptions

Alignments

Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome

Sequence ID: KX756669.1 Length: 18313 Number of Matches: 8

Range 1: 1453 to 2568 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
883.6 bits(1922) 0.0 368/372(99%) 0/372(0%) Minus/Plus
Query        3  RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSVGFLMRMGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPNVPKTAIVAGDRTRLGGEILASVANALNQEEVYSSVVSSITNRLVLRDQSALLSHLDTKLCDMFSQRDAMIREKPSHRCDVFLKPQEKERLRELFPELSIQFSESVRSSHPSANAMRSCFNGIFSRRCGGVCFFDIGGSFTYHVKAGHVNCHVCNPVLDVKDVKRRINEILFLSTAGGDSYVSSDLLTEAASKSVSYCSRESQNCDSRADAGFMVDVYDISPQQVAEAMDKKGALVFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFS  1118
                RAFV TT+GWCWFNNERLRGEIYRRRCFSSSFSVGFLMRMGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPNVPKTAIVAGDRTRLGGEILASVANALNQEEVYSSVVSSITNRLVLRDQSALLSHLDTKLCDMFSQRDAMIREKPSHRCDVFLKPQEKERLRELFPELSIQFS+SVRSSHP ANAMRSCFNGIFSRRCGGVCFFDIGGSFTYHVKAGHVNCHVCNPVLDVKDVKRRINEILFLSTAGGDSYVSSDLLTEAASKSVSYCSRESQNCDSRADAGFMVDVYDISPQQVAEAMDKKGALVFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFS
Subject   1453  RAFVCTTRGWCWFNNERLRGEIYRRRCFSSSFSVGFLMRMGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPNVPKTAIVAGDRTRLGGEILASVANALNQEEVYSSVVSSITNRLVLRDQSALLSHLDTKLCDMFSQRDAMIREKPSHRCDVFLKPQEKERLRELFPELSIQFSDSVRSSHPFANAMRSCFNGIFSRRCGGVCFFDIGGSFTYHVKAGHVNCHVCNPVLDVKDVKRRINEILFLSTAGGDSYVSSDLLTEAASKSVSYCSRESQNCDSRADAGFMVDVYDISPQQVAEAMDKKGALVFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFS  2568

Range 2: 1453 to 2568 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
872.6 bits(1898) 0.0 360/372(97%) 0/372(0%) Plus/Minus
Query        3  RKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IEYQRTLLIHSLCHLLRGYIVHIHHKTRVSSGIAILRFSTTVRYRL*SRFG*EVARHV*ISPSCGKKEDLIDSPLHIFNV*DWVAYVAVHVASFNVIREAPPNIEEAYTTTPPGKDSVETAPHGVSGWMTTPDRLGKLYRKLRKEFPQPLLFLWLQKHIAPV*GFFANHCVPLRKHVTQFRVQMGKQGRLVPQYQPIGDARNDR*IDLLLVKGIGDGGQDLPSQPCPIASDDSGFWDIGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAHAHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP  1118
                RKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IEYQRTLLIHSLCHLLRGYIVHIHHKTRVSSGIAILRFSTTVRYRL*SRFG*EVARHV*ISPSCGKKE+LIDSPLHIFNV*DWVAYVAVHVASFNVIREAPPNIEEAYTTTPPGKDSVETAPHGVS WMTTPDR+GKLYRKLRKEFPQPLLFLWLQKHIAPV*GFFANHCVPLRKHVTQFRVQMGKQGRLVPQYQPIGDARNDR*IDLLLVKGIGDGGQDLPSQPCPIASDDSGFWDIGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAHAHQETYRKGR*EAT S+NFSPQP ++KPTPP G A++RP
Subject   1453  RKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IEYQRTLLIHSLCHLLRGYIVHIHHKTRVSSGIAILRFSTTVRYRL*SRFG*EVARHV*ISPSCGKKENLIDSPLHIFNV*DWVAYVAVHVASFNVIREAPPNIEEAYTTTPPGKDSVETAPHGVSEWMTTPDRVGKLYRKLRKEFPQPLLFLWLQKHIAPV*GFFANHCVPLRKHVTQFRVQMGKQGRLVPQYQPIGDARNDR*IDLLLVKGIGDGGQDLPSQPCPIASDDSGFWDIGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAHAHQETYRKGR*EATASINFSPQPFVIKPTPPSGGAYKRP  2568

Range 3: 1455 to 2570 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
821.7 bits(1787) 0.0 362/372(97%) 0/372(0%) Minus/Plus
Query        1  GVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQCPKNRYRRWR*DTVGRGDLGLRRQCP*PRGGLFICRFEHHQ*AGIEGPIGLAFPFGHEIV*HVFSKGRNDSRKTLTQVRCVSEATGKGEAEGTLSGAFDTVFRVGQE*SSIR*RHAELFQRNLFPEVWWCMLLRYWGELHVSR*SWPRELPRMQPSPRR*RCEAENQ*DPLSFHSWGRFIRV*RPPNRSGFKVCILL*SRIAELRFQS*RGFYGGCVRYIPAAXXXXXXXXXXXGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFL  1116
                GV  H+QRVVLV*  +AEGRNL T LLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQCPKNRYRRWR*DTVGRGDLGLRRQCP*PRGGLFICRFEHHQ*AGIEGPIGLAFPFGHEIV*HVFSKGRNDSRKTLTQVRCVSEATGKGEAEGTLSGAFDTVFR+GQE*SSIR*RHAELFQRNLFPEVWWCMLLRYWGELHVSR*SWPRELPRMQPSPRR*RCEAENQ*D LSFHSWGRFIRV*RPPNRSGFKVCILL*SRIAELRFQS*RGFYGGCVRYIPAAGGRGYG*EGCVGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFL
Subject   1455  GVCMHHQRVVLV**RKAEGRNL*TPLLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQCPKNRYRRWR*DTVGRGDLGLRRQCP*PRGGLFICRFEHHQ*AGIEGPIGLAFPFGHEIV*HVFSKGRNDSRKTLTQVRCVSEATGKGEAEGTLSGAFDTVFRLGQE*SSIR*RHAELFQRNLFPEVWWCMLLRYWGELHVSR*SWPRELPRMQPSPRR*RCEAENQ*DSLSFHSWGRFIRV*RPPNRSGFKVCILL*SRIAELRFQS*RGFYGGCVRYIPAAGGRGYG*EGCVGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFL  2570

Range 4: 1454 to 2533 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
809.3 bits(1760) 0.0 350/360(97%) 0/360(0%) Plus/Minus
Query       38  NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNRIXXXXXXXXXXXXAAGIYRTHPP*NPRQLWNRNSAILDYSKIQTLKPLRLGGR*TRMNLPQLWKERGSH*FSASHL*RLGLGCIRGSSRGQL*RDT*SSPQYRRSIHHHTSGKRFR*NSSAWR*RMDDYS*PTRKTVSKAPERVPSASPFPVASETHRTCVRVFRESLRPFEKTCHTISCPNGKARPIGPSIPAYW*CSKRQMNRPPLG*GHWRRRPRSPLPTVSYRQRR*RFLGHWGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP  1117
                NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNRIPTHPSYP*PLPPAAGIYRTHPP*NPRQLWNRNSAILDYSKIQTLKPLRLGGR*TRMNLPQLWKER SH*FSASHL*RLGLGCIRGSSRGQL*RDT*SSPQYRRSIHHHTSGKRFR*NSSAWR*RMDDYS*P+RKTVSKAPERVPSASPFPVASETHRTCVRVFRESLRPFEKTCHTISCPNGKARPIGPSIPAYW*CSKRQMNRPPLG*GHWRRRPRSPLPTVSYRQRR*RFLGHWGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSN V KFLPSA   *TNTTLW C +TP
Subject   1454  NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNRIPTHPSYP*PLPPAAGIYRTHPP*NPRQLWNRNSAILDYSKIQTLKPLRLGGR*TRMNLPQLWKERESH*FSASHL*RLGLGCIRGSSRGQL*RDT*SSPQYRRSIHHHTSGKRFR*NSSAWR*RMDDYS*PSRKTVSKAPERVPSASPFPVASETHRTCVRVFRESLRPFEKTCHTISCPNGKARPIGPSIPAYW*CSKRQMNRPPLG*GHWRRRPRSPLPTVSYRQRR*RFLGHWGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSNGVYKFLPSAFRY*TNTTLWWCIQTP  2533

Range 5: 1455 to 2570 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
780.9 bits(1698) 0.0 369/372(99%) 0/372(0%) Plus/Minus
Query        1  *EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNTNAPFLSIASATCCGDISYTSTIKPASALESQFCDSRLQ*DTDFEAASVRRSLDTYESPPAVERKRISLILRFTSLTSRTGLHTWQFTWPALT*YVKLPPISKKHTPPHLREKIPLKQLRMALADG*LLLTDSENCIEXXXXXXXXXXXXXXXRNTSHLCEGFSRIIASL*ENMSHNFVSKWESKADWSLNTSLLVMLETTDE*TSSWLRALATEAKISPPNRVLSPATIAVFGTLGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPMRIKKPTEKEDEKQRRXXXXXXXXXXXNQHHPLVVLTNA  1116
                *EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNTNAPFLSIASATCCGDISYTSTIKPASALESQFCDSRLQ*DTDFEAASVRRSLDTYESPPAVERKRISLILRFTSLTSRTGLHTWQFTWPALT*YVKLPPISKKHTPPHLREKIPLKQLRMALA+G*LLLT+SENCIESSGKSSLSLSFSCGFRNTSHLCEGFSRIIASL*ENMSHNFVSKWESKADWSLNTSLLVMLETTDE*TSSWLRALATEAKISPPNRVLSPATIAVFGTLGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPMRIKKPTEKEDEKQRRL*ISPLSLSLLNQHHPLVV TNA
Subject   1455  *EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNTNAPFLSIASATCCGDISYTSTIKPASALESQFCDSRLQ*DTDFEAASVRRSLDTYESPPAVERKRISLILRFTSLTSRTGLHTWQFTWPALT*YVKLPPISKKHTPPHLREKIPLKQLRMALANG*LLLTESENCIESSGKSSLSLSFSCGFRNTSHLCEGFSRIIASL*ENMSHNFVSKWESKADWSLNTSLLVMLETTDE*TSSWLRALATEAKISPPNRVLSPATIAVFGTLGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPMRIKKPTEKEDEKQRRL*ISPLSLSLLNQHHPLVVHTNA  2570

Range 6: 1454 to 1939 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
376.8 bits(816) 0.0 153/162(94%) 0/162(0%) Minus/Plus
Query      632  GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CAWALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISPMSQKPLSSLAIGHGWEGRSWPPSPMPLTKRRSIHLSFRASPIGWY*GTNRPCFPIWTRNCVTCFLKGTQ*FAKNPHTGAMCF*SH  1117
                GR  A P+GGVGL  +G*GEKF D VASHLPFR*VS*CAWALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISPMSQKPLSSLAIGHGWEGRSWPPSPMPLTKRRSIHLSFRASPIGWY*GTNRPCFPIWTRNCVTCFLKGTQ*FAKNPHTGAMCF*SH
Subject   1454  GRLYAPPEGGVGLITKG*GEKFIDAVASHLPFR*VS*CAWALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISPMSQKPLSSLAIGHGWEGRSWPPSPMPLTKRRSIHLSFRASPIGWY*GTNRPCFPIWTRNCVTCFLKGTQ*FAKNPHTGAMCF*SH  1939

Range 7: 2165 to 2569 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
325.9 bits(705) 0.0 134/135(99%) 0/135(0%) Minus/Plus
Query        2  KM*SGESMRSSFFPQLGEIHTCLATS*PKRLQSLYLTVVENRRIAIPELTRVLWWMCTIYPRSRWQRLWIRRVRWYSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFL  406
                KM*SGESMR SFFPQLGEIHTCLATS*PKRLQSLYLTVVENRRIAIPELTRVLWWMCTIYPRSRWQRLWIRRVRWYSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFL
Subject   2165  KM*SGESMRFSFFPQLGEIHTCLATS*PKRLQSLYLTVVENRRIAIPELTRVLWWMCTIYPRSRWQRLWIRRVRWYSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFL  2569

Range 8: 2003 to 2110 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.1 bits(175) 0.0 35/36(97%) 0/36(0%) Minus/Plus
Query      461  GVVIHPLTPCGAVSTESFPGGVVVYASSILGGASRI  568
                GVVIH LTPCGAVSTESFPGGVVVYASSILGGASRI
Subject   2003  GVVIHSLTPCGAVSTESFPGGVVVYASSILGGASRI  2110

Grapevine leafroll associated virus 3 isolate 3138 07, complete genome

Sequence ID: JX559645.1 Length: 18498 Number of Matches: 8

Range 1: 1638 to 2753 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
881.3 bits(1917) 0.0 367/372(99%) 0/372(0%) Minus/Plus
Query        3  RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSVGFLMRMGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPNVPKTAIVAGDRTRLGGEILASVANALNQEEVYSSVVSSITNRLVLRDQSALLSHLDTKLCDMFSQRDAMIREKPSHRCDVFLKPQEKERLRELFPELSIQFSESVRSSHPSANAMRSCFNGIFSRRCGGVCFFDIGGSFTYHVKAGHVNCHVCNPVLDVKDVKRRINEILFLSTAGGDSYVSSDLLTEAASKSVSYCSRESQNCDSRADAGFMVDVYDISPQQVAEAMDKKGALVFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFS  1118
                RAFV TT+GWCWFNNERLRGEIYRRRCFSSSFSVGFLM MGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPNVPKTAIVAGDRTRLGGEILASVANALNQEEVYSSVVSSITNRLVLRDQSALLSHLDTKLCDMFSQRDAMIREKPSHRCDVFLKPQEKERLRELFPELSIQFS+SVRSSHP ANAMRSCFNGIFSRRCGGVCFFDIGGSFTYHVKAGHVNCHVCNPVLDVKDVKRRINEILFLSTAGGDSYVSSDLLTEAASKSVSYCSRESQNCDSRADAGFMVDVYDISPQQVAEAMDKKGALVFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFS
Subject   1638  RAFVCTTRGWCWFNNERLRGEIYRRRCFSSSFSVGFLMHMGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPNVPKTAIVAGDRTRLGGEILASVANALNQEEVYSSVVSSITNRLVLRDQSALLSHLDTKLCDMFSQRDAMIREKPSHRCDVFLKPQEKERLRELFPELSIQFSDSVRSSHPFANAMRSCFNGIFSRRCGGVCFFDIGGSFTYHVKAGHVNCHVCNPVLDVKDVKRRINEILFLSTAGGDSYVSSDLLTEAASKSVSYCSRESQNCDSRADAGFMVDVYDISPQQVAEAMDKKGALVFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFS  2753

Range 2: 1638 to 2753 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
870.7 bits(1894) 0.0 359/372(97%) 0/372(0%) Plus/Minus
Query        3  RKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IEYQRTLLIHSLCHLLRGYIVHIHHKTRVSSGIAILRFSTTVRYRL*SRFG*EVARHV*ISPSCGKKEDLIDSPLHIFNV*DWVAYVAVHVASFNVIREAPPNIEEAYTTTPPGKDSVETAPHGVSGWMTTPDRLGKLYRKLRKEFPQPLLFLWLQKHIAPV*GFFANHCVPLRKHVTQFRVQMGKQGRLVPQYQPIGDARNDR*IDLLLVKGIGDGGQDLPSQPCPIASDDSGFWDIGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAHAHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP  1118
                RKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IEYQRTLLIHSLCHLLRGYIVHIHHKTRVSSGIAILRFSTTVRYRL*SRFG*EVARHV*ISPSCGKKE+LIDSPLHIFNV*DWVAYVAVHVASFNVIREAPPNIEEAYTTTPPGKDSVETAPHGVS WMTTPDR+GKLYRKLRKEFPQPLLFLWLQKHIAPV*GFFANHCVPLRKHVTQFRVQMGKQGRLVPQYQPIGDARNDR*IDLLLVKGIGDGGQDLPSQPCPIASDDSGFWDIGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAH HQETYRKGR*EAT S+NFSPQP ++KPTPP G A++RP
Subject   1638  RKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IEYQRTLLIHSLCHLLRGYIVHIHHKTRVSSGIAILRFSTTVRYRL*SRFG*EVARHV*ISPSCGKKENLIDSPLHIFNV*DWVAYVAVHVASFNVIREAPPNIEEAYTTTPPGKDSVETAPHGVSEWMTTPDRVGKLYRKLRKEFPQPLLFLWLQKHIAPV*GFFANHCVPLRKHVTQFRVQMGKQGRLVPQYQPIGDARNDR*IDLLLVKGIGDGGQDLPSQPCPIASDDSGFWDIGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAHVHQETYRKGR*EATASINFSPQPFVIKPTPPSGGAYKRP  2753

Range 3: 1640 to 2755 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
821.7 bits(1787) 0.0 362/372(97%) 0/372(0%) Minus/Plus
Query        1  GVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQCPKNRYRRWR*DTVGRGDLGLRRQCP*PRGGLFICRFEHHQ*AGIEGPIGLAFPFGHEIV*HVFSKGRNDSRKTLTQVRCVSEATGKGEAEGTLSGAFDTVFRVGQE*SSIR*RHAELFQRNLFPEVWWCMLLRYWGELHVSR*SWPRELPRMQPSPRR*RCEAENQ*DPLSFHSWGRFIRV*RPPNRSGFKVCILL*SRIAELRFQS*RGFYGGCVRYIPAAXXXXXXXXXXXGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFL  1116
                GV  H+QRVVLV*  +AEGRNL T LLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQCPKNRYRRWR*DTVGRGDLGLRRQCP*PRGGLFICRFEHHQ*AGIEGPIGLAFPFGHEIV*HVFSKGRNDSRKTLTQVRCVSEATGKGEAEGTLSGAFDTVFR+GQE*SSIR*RHAELFQRNLFPEVWWCMLLRYWGELHVSR*SWPRELPRMQPSPRR*RCEAENQ*D LSFHSWGRFIRV*RPPNRSGFKVCILL*SRIAELRFQS*RGFYGGCVRYIPAAGGRGYG*EGCVGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFL
Subject   1640  GVCMHHQRVVLV**RKAEGRNL*TPLLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQCPKNRYRRWR*DTVGRGDLGLRRQCP*PRGGLFICRFEHHQ*AGIEGPIGLAFPFGHEIV*HVFSKGRNDSRKTLTQVRCVSEATGKGEAEGTLSGAFDTVFRLGQE*SSIR*RHAELFQRNLFPEVWWCMLLRYWGELHVSR*SWPRELPRMQPSPRR*RCEAENQ*DSLSFHSWGRFIRV*RPPNRSGFKVCILL*SRIAELRFQS*RGFYGGCVRYIPAAGGRGYG*EGCVGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFL  2755

Range 4: 1639 to 2718 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
809.3 bits(1760) 0.0 350/360(97%) 0/360(0%) Plus/Minus
Query       38  NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNRIXXXXXXXXXXXXAAGIYRTHPP*NPRQLWNRNSAILDYSKIQTLKPLRLGGR*TRMNLPQLWKERGSH*FSASHL*RLGLGCIRGSSRGQL*RDT*SSPQYRRSIHHHTSGKRFR*NSSAWR*RMDDYS*PTRKTVSKAPERVPSASPFPVASETHRTCVRVFRESLRPFEKTCHTISCPNGKARPIGPSIPAYW*CSKRQMNRPPLG*GHWRRRPRSPLPTVSYRQRR*RFLGHWGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP  1117
                NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNRIPTHPSYP*PLPPAAGIYRTHPP*NPRQLWNRNSAILDYSKIQTLKPLRLGGR*TRMNLPQLWKER SH*FSASHL*RLGLGCIRGSSRGQL*RDT*SSPQYRRSIHHHTSGKRFR*NSSAWR*RMDDYS*P+RKTVSKAPERVPSASPFPVASETHRTCVRVFRESLRPFEKTCHTISCPNGKARPIGPSIPAYW*CSKRQMNRPPLG*GHWRRRPRSPLPTVSYRQRR*RFLGHWGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSN V KFLPSA   *TNTTLW C +TP
Subject   1639  NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNRIPTHPSYP*PLPPAAGIYRTHPP*NPRQLWNRNSAILDYSKIQTLKPLRLGGR*TRMNLPQLWKERESH*FSASHL*RLGLGCIRGSSRGQL*RDT*SSPQYRRSIHHHTSGKRFR*NSSAWR*RMDDYS*PSRKTVSKAPERVPSASPFPVASETHRTCVRVFRESLRPFEKTCHTISCPNGKARPIGPSIPAYW*CSKRQMNRPPLG*GHWRRRPRSPLPTVSYRQRR*RFLGHWGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSNGVYKFLPSAFRY*TNTTLWWCIQTP  2718

Range 5: 1640 to 2755 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
777.3 bits(1690) 0.0 368/372(99%) 0/372(0%) Plus/Minus
Query        1  *EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNTNAPFLSIASATCCGDISYTSTIKPASALESQFCDSRLQ*DTDFEAASVRRSLDTYESPPAVERKRISLILRFTSLTSRTGLHTWQFTWPALT*YVKLPPISKKHTPPHLREKIPLKQLRMALADG*LLLTDSENCIEXXXXXXXXXXXXXXXRNTSHLCEGFSRIIASL*ENMSHNFVSKWESKADWSLNTSLLVMLETTDE*TSSWLRALATEAKISPPNRVLSPATIAVFGTLGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPMRIKKPTEKEDEKQRRXXXXXXXXXXXNQHHPLVVLTNA  1116
                *EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNTNAPFLSIASATCCGDISYTSTIKPASALESQFCDSRLQ*DTDFEAASVRRSLDTYESPPAVERKRISLILRFTSLTSRTGLHTWQFTWPALT*YVKLPPISKKHTPPHLREKIPLKQLRMALA+G*LLLT+SENCIESSGKSSLSLSFSCGFRNTSHLCEGFSRIIASL*ENMSHNFVSKWESKADWSLNTSLLVMLETTDE*TSSWLRALATEAKISPPNRVLSPATIAVFGTLGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPM IKKPTEKEDEKQRRL*ISPLSLSLLNQHHPLVV TNA
Subject   1640  *EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNTNAPFLSIASATCCGDISYTSTIKPASALESQFCDSRLQ*DTDFEAASVRRSLDTYESPPAVERKRISLILRFTSLTSRTGLHTWQFTWPALT*YVKLPPISKKHTPPHLREKIPLKQLRMALANG*LLLTESENCIESSGKSSLSLSFSCGFRNTSHLCEGFSRIIASL*ENMSHNFVSKWESKADWSLNTSLLVMLETTDE*TSSWLRALATEAKISPPNRVLSPATIAVFGTLGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPMCIKKPTEKEDEKQRRL*ISPLSLSLLNQHHPLVVHTNA  2755

Range 6: 1639 to 2124 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
375.0 bits(812) 0.0 152/162(94%) 0/162(0%) Minus/Plus
Query      632  GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CAWALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISPMSQKPLSSLAIGHGWEGRSWPPSPMPLTKRRSIHLSFRASPIGWY*GTNRPCFPIWTRNCVTCFLKGTQ*FAKNPHTGAMCF*SH  1117
                GR  A P+GGVGL  +G*GEKF D VASHLPFR*VS*C WALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISPMSQKPLSSLAIGHGWEGRSWPPSPMPLTKRRSIHLSFRASPIGWY*GTNRPCFPIWTRNCVTCFLKGTQ*FAKNPHTGAMCF*SH
Subject   1639  GRLYAPPEGGVGLITKG*GEKFIDAVASHLPFR*VS*CTWALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISPMSQKPLSSLAIGHGWEGRSWPPSPMPLTKRRSIHLSFRASPIGWY*GTNRPCFPIWTRNCVTCFLKGTQ*FAKNPHTGAMCF*SH  2124

Range 7: 2350 to 2754 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
325.9 bits(705) 0.0 134/135(99%) 0/135(0%) Minus/Plus
Query        2  KM*SGESMRSSFFPQLGEIHTCLATS*PKRLQSLYLTVVENRRIAIPELTRVLWWMCTIYPRSRWQRLWIRRVRWYSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFL  406
                KM*SGESMR SFFPQLGEIHTCLATS*PKRLQSLYLTVVENRRIAIPELTRVLWWMCTIYPRSRWQRLWIRRVRWYSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFL
Subject   2350  KM*SGESMRFSFFPQLGEIHTCLATS*PKRLQSLYLTVVENRRIAIPELTRVLWWMCTIYPRSRWQRLWIRRVRWYSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFL  2754

Range 8: 2188 to 2295 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.1 bits(175) 0.0 35/36(97%) 0/36(0%) Minus/Plus
Query      461  GVVIHPLTPCGAVSTESFPGGVVVYASSILGGASRI  568
                GVVIH LTPCGAVSTESFPGGVVVYASSILGGASRI
Subject   2188  GVVIHSLTPCGAVSTESFPGGVVVYASSILGGASRI  2295

Grapevine leafroll associated virus 3 isolate 621, complete genome

Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 8

Range 1: 1638 to 2753 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
881.3 bits(1917) 0.0 367/372(99%) 0/372(0%) Minus/Plus
Query        3  RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSVGFLMRMGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPNVPKTAIVAGDRTRLGGEILASVANALNQEEVYSSVVSSITNRLVLRDQSALLSHLDTKLCDMFSQRDAMIREKPSHRCDVFLKPQEKERLRELFPELSIQFSESVRSSHPSANAMRSCFNGIFSRRCGGVCFFDIGGSFTYHVKAGHVNCHVCNPVLDVKDVKRRINEILFLSTAGGDSYVSSDLLTEAASKSVSYCSRESQNCDSRADAGFMVDVYDISPQQVAEAMDKKGALVFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFS  1118
                RAFV TT+GWCWFNNERLRGEIYRRRCFSSSFSVGFLM MGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPNVPKTAIVAGDRTRLGGEILASVANALNQEEVYSSVVSSITNRLVLRDQSALLSHLDTKLCDMFSQRDAMIREKPSHRCDVFLKPQEKERLRELFPELSIQFS+SVRSSHP ANAMRSCFNGIFSRRCGGVCFFDIGGSFTYHVKAGHVNCHVCNPVLDVKDVKRRINEILFLSTAGGDSYVSSDLLTEAASKSVSYCSRESQNCDSRADAGFMVDVYDISPQQVAEAMDKKGALVFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFS
Subject   1638  RAFVCTTRGWCWFNNERLRGEIYRRRCFSSSFSVGFLMHMGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPNVPKTAIVAGDRTRLGGEILASVANALNQEEVYSSVVSSITNRLVLRDQSALLSHLDTKLCDMFSQRDAMIREKPSHRCDVFLKPQEKERLRELFPELSIQFSDSVRSSHPFANAMRSCFNGIFSRRCGGVCFFDIGGSFTYHVKAGHVNCHVCNPVLDVKDVKRRINEILFLSTAGGDSYVSSDLLTEAASKSVSYCSRESQNCDSRADAGFMVDVYDISPQQVAEAMDKKGALVFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFS  2753

Range 2: 1638 to 2753 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
870.7 bits(1894) 0.0 359/372(97%) 0/372(0%) Plus/Minus
Query        3  RKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IEYQRTLLIHSLCHLLRGYIVHIHHKTRVSSGIAILRFSTTVRYRL*SRFG*EVARHV*ISPSCGKKEDLIDSPLHIFNV*DWVAYVAVHVASFNVIREAPPNIEEAYTTTPPGKDSVETAPHGVSGWMTTPDRLGKLYRKLRKEFPQPLLFLWLQKHIAPV*GFFANHCVPLRKHVTQFRVQMGKQGRLVPQYQPIGDARNDR*IDLLLVKGIGDGGQDLPSQPCPIASDDSGFWDIGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAHAHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP  1118
                RKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IEYQRTLLIHSLCHLLRGYIVHIHHKTRVSSGIAILRFSTTVRYRL*SRFG*EVARHV*ISPSCGKKE+LIDSPLHIFNV*DWVAYVAVHVASFNVIREAPPNIEEAYTTTPPGKDSVETAPHGVS WMTTPDR+GKLYRKLRKEFPQPLLFLWLQKHIAPV*GFFANHCVPLRKHVTQFRVQMGKQGRLVPQYQPIGDARNDR*IDLLLVKGIGDGGQDLPSQPCPIASDDSGFWDIGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAH HQETYRKGR*EAT S+NFSPQP ++KPTPP G A++RP
Subject   1638  RKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IEYQRTLLIHSLCHLLRGYIVHIHHKTRVSSGIAILRFSTTVRYRL*SRFG*EVARHV*ISPSCGKKENLIDSPLHIFNV*DWVAYVAVHVASFNVIREAPPNIEEAYTTTPPGKDSVETAPHGVSEWMTTPDRVGKLYRKLRKEFPQPLLFLWLQKHIAPV*GFFANHCVPLRKHVTQFRVQMGKQGRLVPQYQPIGDARNDR*IDLLLVKGIGDGGQDLPSQPCPIASDDSGFWDIGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAHVHQETYRKGR*EATASINFSPQPFVIKPTPPSGGAYKRP  2753

Range 3: 1640 to 2755 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
821.7 bits(1787) 0.0 362/372(97%) 0/372(0%) Minus/Plus
Query        1  GVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQCPKNRYRRWR*DTVGRGDLGLRRQCP*PRGGLFICRFEHHQ*AGIEGPIGLAFPFGHEIV*HVFSKGRNDSRKTLTQVRCVSEATGKGEAEGTLSGAFDTVFRVGQE*SSIR*RHAELFQRNLFPEVWWCMLLRYWGELHVSR*SWPRELPRMQPSPRR*RCEAENQ*DPLSFHSWGRFIRV*RPPNRSGFKVCILL*SRIAELRFQS*RGFYGGCVRYIPAAXXXXXXXXXXXGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFL  1116
                GV  H+QRVVLV*  +AEGRNL T LLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQCPKNRYRRWR*DTVGRGDLGLRRQCP*PRGGLFICRFEHHQ*AGIEGPIGLAFPFGHEIV*HVFSKGRNDSRKTLTQVRCVSEATGKGEAEGTLSGAFDTVFR+GQE*SSIR*RHAELFQRNLFPEVWWCMLLRYWGELHVSR*SWPRELPRMQPSPRR*RCEAENQ*D LSFHSWGRFIRV*RPPNRSGFKVCILL*SRIAELRFQS*RGFYGGCVRYIPAAGGRGYG*EGCVGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFL
Subject   1640  GVCMHHQRVVLV**RKAEGRNL*TPLLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQCPKNRYRRWR*DTVGRGDLGLRRQCP*PRGGLFICRFEHHQ*AGIEGPIGLAFPFGHEIV*HVFSKGRNDSRKTLTQVRCVSEATGKGEAEGTLSGAFDTVFRLGQE*SSIR*RHAELFQRNLFPEVWWCMLLRYWGELHVSR*SWPRELPRMQPSPRR*RCEAENQ*DSLSFHSWGRFIRV*RPPNRSGFKVCILL*SRIAELRFQS*RGFYGGCVRYIPAAGGRGYG*EGCVGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFL  2755

Range 4: 1639 to 2718 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
809.3 bits(1760) 0.0 350/360(97%) 0/360(0%) Plus/Minus
Query       38  NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNRIXXXXXXXXXXXXAAGIYRTHPP*NPRQLWNRNSAILDYSKIQTLKPLRLGGR*TRMNLPQLWKERGSH*FSASHL*RLGLGCIRGSSRGQL*RDT*SSPQYRRSIHHHTSGKRFR*NSSAWR*RMDDYS*PTRKTVSKAPERVPSASPFPVASETHRTCVRVFRESLRPFEKTCHTISCPNGKARPIGPSIPAYW*CSKRQMNRPPLG*GHWRRRPRSPLPTVSYRQRR*RFLGHWGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP  1117
                NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNRIPTHPSYP*PLPPAAGIYRTHPP*NPRQLWNRNSAILDYSKIQTLKPLRLGGR*TRMNLPQLWKER SH*FSASHL*RLGLGCIRGSSRGQL*RDT*SSPQYRRSIHHHTSGKRFR*NSSAWR*RMDDYS*P+RKTVSKAPERVPSASPFPVASETHRTCVRVFRESLRPFEKTCHTISCPNGKARPIGPSIPAYW*CSKRQMNRPPLG*GHWRRRPRSPLPTVSYRQRR*RFLGHWGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSN V KFLPSA   *TNTTLW C +TP
Subject   1639  NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNRIPTHPSYP*PLPPAAGIYRTHPP*NPRQLWNRNSAILDYSKIQTLKPLRLGGR*TRMNLPQLWKERESH*FSASHL*RLGLGCIRGSSRGQL*RDT*SSPQYRRSIHHHTSGKRFR*NSSAWR*RMDDYS*PSRKTVSKAPERVPSASPFPVASETHRTCVRVFRESLRPFEKTCHTISCPNGKARPIGPSIPAYW*CSKRQMNRPPLG*GHWRRRPRSPLPTVSYRQRR*RFLGHWGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSNGVYKFLPSAFRY*TNTTLWWCIQTP  2718

Range 5: 1640 to 2755 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
777.3 bits(1690) 0.0 368/372(99%) 0/372(0%) Plus/Minus
Query        1  *EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNTNAPFLSIASATCCGDISYTSTIKPASALESQFCDSRLQ*DTDFEAASVRRSLDTYESPPAVERKRISLILRFTSLTSRTGLHTWQFTWPALT*YVKLPPISKKHTPPHLREKIPLKQLRMALADG*LLLTDSENCIEXXXXXXXXXXXXXXXRNTSHLCEGFSRIIASL*ENMSHNFVSKWESKADWSLNTSLLVMLETTDE*TSSWLRALATEAKISPPNRVLSPATIAVFGTLGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPMRIKKPTEKEDEKQRRXXXXXXXXXXXNQHHPLVVLTNA  1116
                *EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNTNAPFLSIASATCCGDISYTSTIKPASALESQFCDSRLQ*DTDFEAASVRRSLDTYESPPAVERKRISLILRFTSLTSRTGLHTWQFTWPALT*YVKLPPISKKHTPPHLREKIPLKQLRMALA+G*LLLT+SENCIESSGKSSLSLSFSCGFRNTSHLCEGFSRIIASL*ENMSHNFVSKWESKADWSLNTSLLVMLETTDE*TSSWLRALATEAKISPPNRVLSPATIAVFGTLGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPM IKKPTEKEDEKQRRL*ISPLSLSLLNQHHPLVV TNA
Subject   1640  *EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNTNAPFLSIASATCCGDISYTSTIKPASALESQFCDSRLQ*DTDFEAASVRRSLDTYESPPAVERKRISLILRFTSLTSRTGLHTWQFTWPALT*YVKLPPISKKHTPPHLREKIPLKQLRMALANG*LLLTESENCIESSGKSSLSLSFSCGFRNTSHLCEGFSRIIASL*ENMSHNFVSKWESKADWSLNTSLLVMLETTDE*TSSWLRALATEAKISPPNRVLSPATIAVFGTLGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPMCIKKPTEKEDEKQRRL*ISPLSLSLLNQHHPLVVHTNA  2755

Range 6: 1639 to 2124 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
375.0 bits(812) 0.0 152/162(94%) 0/162(0%) Minus/Plus
Query      632  GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CAWALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISPMSQKPLSSLAIGHGWEGRSWPPSPMPLTKRRSIHLSFRASPIGWY*GTNRPCFPIWTRNCVTCFLKGTQ*FAKNPHTGAMCF*SH  1117
                GR  A P+GGVGL  +G*GEKF D VASHLPFR*VS*C WALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISPMSQKPLSSLAIGHGWEGRSWPPSPMPLTKRRSIHLSFRASPIGWY*GTNRPCFPIWTRNCVTCFLKGTQ*FAKNPHTGAMCF*SH
Subject   1639  GRLYAPPEGGVGLITKG*GEKFIDAVASHLPFR*VS*CTWALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISPMSQKPLSSLAIGHGWEGRSWPPSPMPLTKRRSIHLSFRASPIGWY*GTNRPCFPIWTRNCVTCFLKGTQ*FAKNPHTGAMCF*SH  2124

Range 7: 2350 to 2754 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
325.9 bits(705) 0.0 134/135(99%) 0/135(0%) Minus/Plus
Query        2  KM*SGESMRSSFFPQLGEIHTCLATS*PKRLQSLYLTVVENRRIAIPELTRVLWWMCTIYPRSRWQRLWIRRVRWYSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFL  406
                KM*SGESMR SFFPQLGEIHTCLATS*PKRLQSLYLTVVENRRIAIPELTRVLWWMCTIYPRSRWQRLWIRRVRWYSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFL
Subject   2350  KM*SGESMRFSFFPQLGEIHTCLATS*PKRLQSLYLTVVENRRIAIPELTRVLWWMCTIYPRSRWQRLWIRRVRWYSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFL  2754

Range 8: 2188 to 2295 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.1 bits(175) 0.0 35/36(97%) 0/36(0%) Minus/Plus
Query      461  GVVIHPLTPCGAVSTESFPGGVVVYASSILGGASRI  568
                GVVIH LTPCGAVSTESFPGGVVVYASSILGGASRI
Subject   2188  GVVIHSLTPCGAVSTESFPGGVVVYASSILGGASRI  2295

Grapevine leafroll associated virus 3 isolate WA MR, complete genome

Sequence ID: GU983863.1 Length: 18498 Number of Matches: 8

Range 1: 1638 to 2753 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
881.3 bits(1917) 0.0 367/372(99%) 0/372(0%) Minus/Plus
Query        3  RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSVGFLMRMGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPNVPKTAIVAGDRTRLGGEILASVANALNQEEVYSSVVSSITNRLVLRDQSALLSHLDTKLCDMFSQRDAMIREKPSHRCDVFLKPQEKERLRELFPELSIQFSESVRSSHPSANAMRSCFNGIFSRRCGGVCFFDIGGSFTYHVKAGHVNCHVCNPVLDVKDVKRRINEILFLSTAGGDSYVSSDLLTEAASKSVSYCSRESQNCDSRADAGFMVDVYDISPQQVAEAMDKKGALVFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFS  1118
                RAFV TT+GWCWFNNERLRGEIYRRRCFSSSFSVGFLM MGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPNVPKTAIVAGDRTRLGGEILASVANALNQEEVYSSVVSSITNRLVLRDQSALLSHLDTKLCDMFSQRDAMIREKPSHRCDVFLKPQEKERLRELFPELSIQFS+SVRSSHP ANAMRSCFNGIFSRRCGGVCFFDIGGSFTYHVKAGHVNCHVCNPVLDVKDVKRRINEILFLSTAGGDSYVSSDLLTEAASKSVSYCSRESQNCDSRADAGFMVDVYDISPQQVAEAMDKKGALVFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFS
Subject   1638  RAFVCTTRGWCWFNNERLRGEIYRRRCFSSSFSVGFLMHMGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPNVPKTAIVAGDRTRLGGEILASVANALNQEEVYSSVVSSITNRLVLRDQSALLSHLDTKLCDMFSQRDAMIREKPSHRCDVFLKPQEKERLRELFPELSIQFSDSVRSSHPFANAMRSCFNGIFSRRCGGVCFFDIGGSFTYHVKAGHVNCHVCNPVLDVKDVKRRINEILFLSTAGGDSYVSSDLLTEAASKSVSYCSRESQNCDSRADAGFMVDVYDISPQQVAEAMDKKGALVFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFS  2753

Range 2: 1638 to 2753 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
870.7 bits(1894) 0.0 359/372(97%) 0/372(0%) Plus/Minus
Query        3  RKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IEYQRTLLIHSLCHLLRGYIVHIHHKTRVSSGIAILRFSTTVRYRL*SRFG*EVARHV*ISPSCGKKEDLIDSPLHIFNV*DWVAYVAVHVASFNVIREAPPNIEEAYTTTPPGKDSVETAPHGVSGWMTTPDRLGKLYRKLRKEFPQPLLFLWLQKHIAPV*GFFANHCVPLRKHVTQFRVQMGKQGRLVPQYQPIGDARNDR*IDLLLVKGIGDGGQDLPSQPCPIASDDSGFWDIGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAHAHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP  1118
                RKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IEYQRTLLIHSLCHLLRGYIVHIHHKTRVSSGIAILRFSTTVRYRL*SRFG*EVARHV*ISPSCGKKE+LIDSPLHIFNV*DWVAYVAVHVASFNVIREAPPNIEEAYTTTPPGKDSVETAPHGVS WMTTPDR+GKLYRKLRKEFPQPLLFLWLQKHIAPV*GFFANHCVPLRKHVTQFRVQMGKQGRLVPQYQPIGDARNDR*IDLLLVKGIGDGGQDLPSQPCPIASDDSGFWDIGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAH HQETYRKGR*EAT S+NFSPQP ++KPTPP G A++RP
Subject   1638  RKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IEYQRTLLIHSLCHLLRGYIVHIHHKTRVSSGIAILRFSTTVRYRL*SRFG*EVARHV*ISPSCGKKENLIDSPLHIFNV*DWVAYVAVHVASFNVIREAPPNIEEAYTTTPPGKDSVETAPHGVSEWMTTPDRVGKLYRKLRKEFPQPLLFLWLQKHIAPV*GFFANHCVPLRKHVTQFRVQMGKQGRLVPQYQPIGDARNDR*IDLLLVKGIGDGGQDLPSQPCPIASDDSGFWDIGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAHVHQETYRKGR*EATASINFSPQPFVIKPTPPSGGAYKRP  2753

Range 3: 1640 to 2755 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
821.7 bits(1787) 0.0 362/372(97%) 0/372(0%) Minus/Plus
Query        1  GVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQCPKNRYRRWR*DTVGRGDLGLRRQCP*PRGGLFICRFEHHQ*AGIEGPIGLAFPFGHEIV*HVFSKGRNDSRKTLTQVRCVSEATGKGEAEGTLSGAFDTVFRVGQE*SSIR*RHAELFQRNLFPEVWWCMLLRYWGELHVSR*SWPRELPRMQPSPRR*RCEAENQ*DPLSFHSWGRFIRV*RPPNRSGFKVCILL*SRIAELRFQS*RGFYGGCVRYIPAAXXXXXXXXXXXGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFL  1116
                GV  H+QRVVLV*  +AEGRNL T LLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQCPKNRYRRWR*DTVGRGDLGLRRQCP*PRGGLFICRFEHHQ*AGIEGPIGLAFPFGHEIV*HVFSKGRNDSRKTLTQVRCVSEATGKGEAEGTLSGAFDTVFR+GQE*SSIR*RHAELFQRNLFPEVWWCMLLRYWGELHVSR*SWPRELPRMQPSPRR*RCEAENQ*D LSFHSWGRFIRV*RPPNRSGFKVCILL*SRIAELRFQS*RGFYGGCVRYIPAAGGRGYG*EGCVGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFL
Subject   1640  GVCMHHQRVVLV**RKAEGRNL*TPLLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQCPKNRYRRWR*DTVGRGDLGLRRQCP*PRGGLFICRFEHHQ*AGIEGPIGLAFPFGHEIV*HVFSKGRNDSRKTLTQVRCVSEATGKGEAEGTLSGAFDTVFRLGQE*SSIR*RHAELFQRNLFPEVWWCMLLRYWGELHVSR*SWPRELPRMQPSPRR*RCEAENQ*DSLSFHSWGRFIRV*RPPNRSGFKVCILL*SRIAELRFQS*RGFYGGCVRYIPAAGGRGYG*EGCVGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFL  2755

Range 4: 1639 to 2718 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
809.3 bits(1760) 0.0 350/360(97%) 0/360(0%) Plus/Minus
Query       38  NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNRIXXXXXXXXXXXXAAGIYRTHPP*NPRQLWNRNSAILDYSKIQTLKPLRLGGR*TRMNLPQLWKERGSH*FSASHL*RLGLGCIRGSSRGQL*RDT*SSPQYRRSIHHHTSGKRFR*NSSAWR*RMDDYS*PTRKTVSKAPERVPSASPFPVASETHRTCVRVFRESLRPFEKTCHTISCPNGKARPIGPSIPAYW*CSKRQMNRPPLG*GHWRRRPRSPLPTVSYRQRR*RFLGHWGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP  1117
                NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNRIPTHPSYP*PLPPAAGIYRTHPP*NPRQLWNRNSAILDYSKIQTLKPLRLGGR*TRMNLPQLWKER SH*FSASHL*RLGLGCIRGSSRGQL*RDT*SSPQYRRSIHHHTSGKRFR*NSSAWR*RMDDYS*P+RKTVSKAPERVPSASPFPVASETHRTCVRVFRESLRPFEKTCHTISCPNGKARPIGPSIPAYW*CSKRQMNRPPLG*GHWRRRPRSPLPTVSYRQRR*RFLGHWGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSN V KFLPSA   *TNTTLW C +TP
Subject   1639  NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNRIPTHPSYP*PLPPAAGIYRTHPP*NPRQLWNRNSAILDYSKIQTLKPLRLGGR*TRMNLPQLWKERESH*FSASHL*RLGLGCIRGSSRGQL*RDT*SSPQYRRSIHHHTSGKRFR*NSSAWR*RMDDYS*PSRKTVSKAPERVPSASPFPVASETHRTCVRVFRESLRPFEKTCHTISCPNGKARPIGPSIPAYW*CSKRQMNRPPLG*GHWRRRPRSPLPTVSYRQRR*RFLGHWGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSNGVYKFLPSAFRY*TNTTLWWCIQTP  2718

Range 5: 1640 to 2755 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
777.3 bits(1690) 0.0 368/372(99%) 0/372(0%) Plus/Minus
Query        1  *EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNTNAPFLSIASATCCGDISYTSTIKPASALESQFCDSRLQ*DTDFEAASVRRSLDTYESPPAVERKRISLILRFTSLTSRTGLHTWQFTWPALT*YVKLPPISKKHTPPHLREKIPLKQLRMALADG*LLLTDSENCIEXXXXXXXXXXXXXXXRNTSHLCEGFSRIIASL*ENMSHNFVSKWESKADWSLNTSLLVMLETTDE*TSSWLRALATEAKISPPNRVLSPATIAVFGTLGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPMRIKKPTEKEDEKQRRXXXXXXXXXXXNQHHPLVVLTNA  1116
                *EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNTNAPFLSIASATCCGDISYTSTIKPASALESQFCDSRLQ*DTDFEAASVRRSLDTYESPPAVERKRISLILRFTSLTSRTGLHTWQFTWPALT*YVKLPPISKKHTPPHLREKIPLKQLRMALA+G*LLLT+SENCIESSGKSSLSLSFSCGFRNTSHLCEGFSRIIASL*ENMSHNFVSKWESKADWSLNTSLLVMLETTDE*TSSWLRALATEAKISPPNRVLSPATIAVFGTLGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPM IKKPTEKEDEKQRRL*ISPLSLSLLNQHHPLVV TNA
Subject   1640  *EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNTNAPFLSIASATCCGDISYTSTIKPASALESQFCDSRLQ*DTDFEAASVRRSLDTYESPPAVERKRISLILRFTSLTSRTGLHTWQFTWPALT*YVKLPPISKKHTPPHLREKIPLKQLRMALANG*LLLTESENCIESSGKSSLSLSFSCGFRNTSHLCEGFSRIIASL*ENMSHNFVSKWESKADWSLNTSLLVMLETTDE*TSSWLRALATEAKISPPNRVLSPATIAVFGTLGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPMCIKKPTEKEDEKQRRL*ISPLSLSLLNQHHPLVVHTNA  2755

Range 6: 1639 to 2124 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
375.0 bits(812) 0.0 152/162(94%) 0/162(0%) Minus/Plus
Query      632  GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CAWALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISPMSQKPLSSLAIGHGWEGRSWPPSPMPLTKRRSIHLSFRASPIGWY*GTNRPCFPIWTRNCVTCFLKGTQ*FAKNPHTGAMCF*SH  1117
                GR  A P+GGVGL  +G*GEKF D VASHLPFR*VS*C WALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISPMSQKPLSSLAIGHGWEGRSWPPSPMPLTKRRSIHLSFRASPIGWY*GTNRPCFPIWTRNCVTCFLKGTQ*FAKNPHTGAMCF*SH
Subject   1639  GRLYAPPEGGVGLITKG*GEKFIDAVASHLPFR*VS*CTWALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISPMSQKPLSSLAIGHGWEGRSWPPSPMPLTKRRSIHLSFRASPIGWY*GTNRPCFPIWTRNCVTCFLKGTQ*FAKNPHTGAMCF*SH  2124

Range 7: 2350 to 2754 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
325.9 bits(705) 0.0 134/135(99%) 0/135(0%) Minus/Plus
Query        2  KM*SGESMRSSFFPQLGEIHTCLATS*PKRLQSLYLTVVENRRIAIPELTRVLWWMCTIYPRSRWQRLWIRRVRWYSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFL  406
                KM*SGESMR SFFPQLGEIHTCLATS*PKRLQSLYLTVVENRRIAIPELTRVLWWMCTIYPRSRWQRLWIRRVRWYSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFL
Subject   2350  KM*SGESMRFSFFPQLGEIHTCLATS*PKRLQSLYLTVVENRRIAIPELTRVLWWMCTIYPRSRWQRLWIRRVRWYSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFL  2754

Range 8: 2188 to 2295 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.1 bits(175) 0.0 35/36(97%) 0/36(0%) Minus/Plus
Query      461  GVVIHPLTPCGAVSTESFPGGVVVYASSILGGASRI  568
                GVVIH LTPCGAVSTESFPGGVVVYASSILGGASRI
Subject   2188  GVVIHSLTPCGAVSTESFPGGVVVYASSILGGASRI  2295

Grapevine leafroll associated virus 3, complete genome

Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 9

Range 1: 1638 to 2753 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
875.8 bits(1905) 0.0 362/372(97%) 0/372(0%) Minus/Plus
Query        3  RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSVGFLMRMGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPNVPKTAIVAGDRTRLGGEILASVANALNQEEVYSSVVSSITNRLVLRDQSALLSHLDTKLCDMFSQRDAMIREKPSHRCDVFLKPQEKERLRELFPELSIQFSESVRSSHPSANAMRSCFNGIFSRRCGGVCFFDIGGSFTYHVKAGHVNCHVCNPVLDVKDVKRRINEILFLSTAGGDSYVSSDLLTEAASKSVSYCSRESQNCDSRADAGFMVDVYDISPQQVAEAMDKKGALVFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFS  1118
                RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFS+GFLM +GFRSLKA+RFAGTNILHIPSLNEERTFGWKS DVYLPNVPKTAIVAGDRTRLGGEILASVANALNQEEVYSSVVSSITNRLVLRDQSALLSHLDTKLCDMFSQRDAMIREKPSHRCDVFLKPQEKE+LRELFPELSIQFS+SVRSSHP ANAMRSCFNGIFSRRCG VCFFDIGGSFTYHVKAGHVNCHVCNPVLDVKDVKRRINEILFLSTAGGDSYVSSDLLTEAASKSVSYCSRESQNCDSRADAGFMVDVYDISPQQVAEAMDKKGALVFD+ALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFS
Subject   1638  RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSIGFLMHLGFRSLKAIRFAGTNILHIPSLNEERTFGWKSGDVYLPNVPKTAIVAGDRTRLGGEILASVANALNQEEVYSSVVSSITNRLVLRDQSALLSHLDTKLCDMFSQRDAMIREKPSHRCDVFLKPQEKEKLRELFPELSIQFSDSVRSSHPFANAMRSCFNGIFSRRCGSVCFFDIGGSFTYHVKAGHVNCHVCNPVLDVKDVKRRINEILFLSTAGGDSYVSSDLLTEAASKSVSYCSRESQNCDSRADAGFMVDVYDISPQQVAEAMDKKGALVFDIALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFS  2753

Range 2: 1638 to 2753 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
778.6 bits(1693) 0.0 321/372(86%) 0/372(0%) Plus/Minus
Query        3  RKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IEYQRTLLIHSLCHLLRGYIVHIHHKTRVSSGIAILRFSTTVRYRL*SRFG*EVARHV*ISPSCGKKEDLIDSPLHIFNV*DWVAYVAVHVASFNVIREAPPNIEEAYTTTPPGKDSVETAPHGVSGWMTTPDRLGKLYRKLRKEFPQPLLFLWLQKHIAPV*GFFANHCVPLRKHVTQFRVQMGKQGRLVPQYQPIGDARNDR*IDLLLVKGIGDGGQDLPSQPCPIASDDSGFWDIGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAHAHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP  1118
                RKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH RIEF QVNF VT+QQLHGEHKS +E QRTLLIHSLC+LLRGYIVHIHHKTR+ S IA+LRFSTTVR+RL*SRF *+V  HV ISPSCGKKEDLIDSPLHIFNV*DW+AYV VH+ASF++IREAPPNIEEAYTTTPPGKDS+ETAPHG+S W+TTPDR+G+LYRK  KEFPQ LLFL LQKHIAP+*GFFANHCVPLRKH+ QFRVQMGKQ RLVP YQ IGD RNDR*IDLLL+KGIGDGGQDLPSQPCPIASDDSGFWDIGEI++ ALPPKG LFIE WYV*YVRARKP+G  RSKA  HQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP
Subject   1638  RKGEKPAYVREGMFIHLTTLTNIVGQVITFPLHQRIEFFQVNFTVTVQQLHGEHKSYVENQRTLLIHSLCYLLRGYIVHIHHKTRIGSRIAVLRFSTTVRHRL*SRFS*KVTGHVRISPSCGKKEDLIDSPLHIFNV*DWIAYVTVHMASFDMIREAPPNIEEAYTTTPPGKDSIETAPHGISEWVTTPDRVGELYRKFWKEFPQLLLFLRLQKHIAPM*GFFANHCVPLRKHIAQFRVQMGKQCRLVP*YQSIGDTRNDR*IDLLLIKGIGDGGQDLPSQPCPIASDDSGFWDIGEIDVSALPPKGTLFIE*WYV*YVRARKPNGL*RSKAKVHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP  2753

Range 3: 1640 to 2755 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
733.3 bits(1594) 0.0 353/372(95%) 0/372(0%) Plus/Minus
Query        1  *EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNTNAPFLSIASATCCGDISYTSTIKPASALESQFCDSRLQ*DTDFEAASVRRSLDTYESPPAVERKRISLILRFTSLTSRTGLHTWQFTWPALT*YVKLPPISKKHTPPHLREKIPLKQLRMALADG*LLLTDSENCIEXXXXXXXXXXXXXXXRNTSHLCEGFSRIIASL*ENMSHNFVSKWESKADWSLNTSLLVMLETTDE*TSSWLRALATEAKISPPNRVLSPATIAVFGTLGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPMRIKKPTEKEDEKQRRXXXXXXXXXXXNQHHPLVVLTNA  1116
                *EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYN+STGNIRA S T+APFLSIASATCCGDISYTSTIKPASALESQFCDSRLQ*DTDFEAASVRRSLDTYESPPAVERKRISLILRFTSLTSRTGLHT QFTWPALT*YVKLPPISKKHT PHL EKIPLKQLRMALA+G*LLLT+SENCIESSGKSSLS SFSCGFRNTSHLCEGFSRIIASL*EN+SHNFVSKWES ADWSLNTSLLV+LETTDE*TSS LRALATEAKISPPNRVLSPATIAVFGTLGR*TS LFHPKVRSSLSDGMCSMFVPANL AFNDLKP  IKKP EKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNA
Subject   1640  *EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNNSTGNIRAMSKTSAPFLSIASATCCGDISYTSTIKPASALESQFCDSRLQ*DTDFEAASVRRSLDTYESPPAVERKRISLILRFTSLTSRTGLHT*QFTWPALT*YVKLPPISKKHTLPHLLEKIPLKQLRMALANG*LLLTESENCIESSGKSSLSFSFSCGFRNTSHLCEGFSRIIASL*ENISHNFVSKWESNADWSLNTSLLVILETTDE*TSS*LRALATEAKISPPNRVLSPATIAVFGTLGR*TSPLFHPKVRSSLSDGMCSMFVPANLMAFNDLKPRCIKKPIEKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNA  2755

Range 4: 1640 to 2755 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
696.2 bits(1513) 0.0 320/372(86%) 0/372(0%) Minus/Plus
Query        1  GVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQCPKNRYRRWR*DTVGRGDLGLRRQCP*PRGGLFICRFEHHQ*AGIEGPIGLAFPFGHEIV*HVFSKGRNDSRKTLTQVRCVSEATGKGEAEGTLSGAFDTVFRVGQE*SSIR*RHAELFQRNLFPEVWWCMLLRYWGELHVSR*SWPRELPRMQPSPRR*RCEAENQ*DPLSFHSWGRFIRV*RPPNRSGFKVCILL*SRIAELRFQS*RGFYGGCVRYIPAAXXXXXXXXXXXGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFL  1116
                GVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLF RFLDA  L*IV+   VCGHEHTTHTI Q*RA+LWVEERR LSPQCPKNRYRRWR*DTVGRGDLGLRRQCP* RGGLFI RFE+HQ* GI+GPIG+AFPFGHEIV +VFSKGRNDSRKTLT VRCVSEA GKGEAEGTLS  FDTV R+GQE*S IR* HAELFQ NLF EVW CMLLRYWGELHVS  SWP EL RMQ SPRR*RCEAENQ*DPLSFHSWGRF+RV  P N SGFKVC+LL*SRIAELRF S  GFYGGCVRYIPAAG RGYG*EGC G R SSYVPRG VV *R SLLG TRYV EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFL
Subject   1640  GVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLFDRFLDAPWL*IVKGH*VCGHEHTTHTITQ*RAYLWVEERRRLSPQCPKNRYRRWR*DTVGRGDLGLRRQCP*SRGGLFIGRFEYHQ*TGIKGPIGIAFPFGHEIVRYVFSKGRNDSRKTLT*VRCVSEAAGKGEAEGTLSRTFDTVLRLGQE*SPIR*CHAELFQWNLFQEVW*CMLLRYWGELHVSCQSWPCELSRMQSSPRR*RCEAENQ*DPLSFHSWGRFVRVQ*PSN*SGFKVCVLL*SRIAELRF*SRCGFYGGCVRYIPAAGSRGYG*EGCAGFRHSSYVPRGVVVR*R*SLLGRTRYVGEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFL  2755

Range 5: 1639 to 2538 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
594.9 bits(1292) 0.0 257/300(86%) 0/300(0%) Plus/Minus
Query      218  AAGIYRTHPP*NPRQLWNRNSAILDYSKIQTLKPLRLGGR*TRMNLPQLWKERGSH*FSASHL*RLGLGCIRGSSRGQL*RDT*SSPQYRRSIHHHTSGKRFR*NSSAWR*RMDDYS*PTRKTVSKAPERVPSASPFPVASETHRTCVRVFRESLRPFEKTCHTISCPNGKARPIGPSIPAYW*CSKRQMNRPPLG*GHWRRRPRSPLPTVSYRQRR*RFLGHWGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP  1117
                AAGIYRTHPP*NP +L NR+SAILDYSK QTLKPL+L G  TR NLPQLWKERGSH*FSASHL*RLGL CIR SS GQL* DT*SSPQYRRSIH+HTS KRF *NSSAW *RM DYS*P+R+TVSK  ERVPSASPFP ASETHRT VRVFRESLRPFEKT  TISCPNGKA PIGP IP YW* SKR MNRPPL *GHWRRRPRSPLPTVSYRQRR*RFLGHWGD+ LRSSTQR ALH* MVCVVCSCPQT*   TI*S  ASRNL KRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP
Subject   1639  AAGIYRTHPP*NPHRL*NRSSAILDYSKTQTLKPLQLEGHWTRTNLPQLWKERGSH*FSASHL*RLGLDCIRDSSHGQL*HDT*SSPQYRRSIHYHTSWKRFH*NSSAWH*RMGDYS*PSRRTVSKVLERVPSASPFPAASETHRTYVRVFRESLRPFEKTYRTISCPNGKAMPIGPLIPVYW*YSKRPMNRPPLD*GHWRRRPRSPLPTVSYRQRR*RFLGHWGDRRLRSSTQRYALH*VMVCVVCSCPQT*WPLTI*SQGASRNLSKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP  2538

Range 6: 2578 to 2718 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
103.2 bits(219) 0.0 41/47(87%) 0/47(0%) Plus/Minus
Query       38  NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNR  178
                NVHTSHHTDQHCRPGNHLPSS TYRV PSKL RY TT PRGT*EL R
Subject   2578  NVHTSHHTDQHCRPGNHLPSSPTYRVLPSKLHRYRTTTPRGT*ELCR  2718

Range 7: 1639 to 2121 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
348.8 bits(755) 0.0 144/161(89%) 0/161(0%) Minus/Plus
Query      635  GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CAWALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISPMSQKPLSSLAIGHGWEGRSWPPSPMPLTKRRSIHLSFRASPIGWY*GTNRPCFPIWTRNCVTCFLKGTQ*FAKNPHTGAMCF*S  1117
                GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*C  ALDR*+P GLRARTYYTYH SMKS PLGGRA+  ISPMSQKPLSSLAIGHGWEGRSWPPSPMPL KRRSIH SFR SPI WY*GTNR CFPIWTRNC  CFLKGTQ*FAKNPH GAMCF*S
Subject   1639  GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CTLALDR*RPLGLRARTYYTYHHSMKSVPLGGRAETSISPMSQKPLSSLAIGHGWEGRSWPPSPMPLIKRRSIHRSFRVSPIDWY*GTNRHCFPIWTRNCAICFLKGTQ*FAKNPHIGAMCF*S  2121

Range 8: 2350 to 2754 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
276.5 bits(597) 0.0 118/135(87%) 0/135(0%) Minus/Plus
Query        2  KM*SGESMRSSFFPQLGEIHTCLATS*PKRLQSLYLTVVENRRIAIPELTRVLWWMCTIYPRSRWQRLWIRRVRWYSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFL  406
                KM*SGESMRSSFFPQLGEI TC  T * KRLQSL LTVVENRR AI E  RVLWWMCTIYPRSR QRLWIRRVRW+S *LLCSPWSCC VT KFTW+NSIR *RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFL
Subject   2350  KM*SGESMRSSFFPQLGEIRTCPVTF*LKRLQSLCLTVVENRRTAILEPMRVLWWMCTIYPRSR*QRLWIRRVRWFST*LLCSPWSCCTVTVKFTWKNSIRW*RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFL  2754

Range 9: 2188 to 2295 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.3 bits(158) 0.0 32/36(89%) 0/36(0%) Minus/Plus
Query      461  GVVIHPLTPCGAVSTESFPGGVVVYASSILGGASRI  568
                GVV H L PCGAVS ESFPGGVVVYASSILGGASRI
Subject   2188  GVVTHSLMPCGAVSMESFPGGVVVYASSILGGASRI  2295

Nucleotide Sequence (657 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
66
132
198
264
330
396
462
528
594
657

Descriptions

Alignments

Grapevine leafroll associated virus 3 isolate 6 18 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130300.1 Length: 4711 Number of Matches: 14

Range 1: 1271 to 1795 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
391.9 bits(849) 0.0 163/175(93%) 0/175(0%) Plus/Plus
Query        5  RADFPGTQSLSVTLSIASNKLASGLMGNDAESSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKYLGGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFFKGFNKISLKKT  529
                RADFPGTQSLSVTLS+ASNKLASGLMG+DA SSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKY+GGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFF+      LKK+
Subject   1271  RADFPGTQSLSVTLSVASNKLASGLMGSDAVSSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKYIGGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFFRDILLKPLKKS  1795

Range 2: 1269 to 1763 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
377.3 bits(817) 0.0 161/165(98%) 0/165(0%) Minus/Minus
Query        3  *RRCALGKLTVTLYALHPVSSLRNNQGRGSDLRTLSLLFCRYASNFWVDH*RPFAYK*N*QWSVLTHRLRSLVLRTTPRSNCSTCSSYQW*SPLLSHLSISYRR*LPVLSRVCCDTRRTRSNLPRRSSA*TTMILRRFP*DLKLTYYWLSIT*LISFEFRESLLY  497
                *RRCALGKLTVTLYALHPVSSLRNNQGRGSDLRTLSLLFCRYASNFWVDH*RPFAYK*N*QWSVLTHRLRSLVLRTTPRSNCSTCSSYQW*SPLLSHL ISYRR*LPVLSRVCCDTRRTRSNLPRRSSA*TTMILRRFP*DLKLTYYWL IT*LISFE+RESLL+
Subject   1269  *RRCALGKLTVTLYALHPVSSLRNNQGRGSDLRTLSLLFCRYASNFWVDH*RPFAYK*N*QWSVLTHRLRSLVLRTTPRSNCSTCSSYQW*SPLLSHLCISYRR*LPVLSRVCCDTRRTRSNLPRRSSA*TTMILRRFP*DLKLTYYWLPIT*LISFEYRESLLF  1763

Range 3: 1267 to 1791 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
368.6 bits(798) 0.0 164/175(94%) 0/175(0%) Minus/Minus
Query        1  FFRDILLKPLKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTVVCANPSTTFTCITYDASFQLFDV*FLPVVISTPLPPKYFLQKITSRPK*GLL*HTPHSK*SPASFISINDDDSASFPIRPEANLLLAIDNVTDKL*VPGKSALC  525
                FF+      LKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTVVCANPSTTFTCITYDASFQLFDV*FLPVVISTPLPP YFLQKITSRPK*GLL*HTPHSK*SPASFISINDDD+AS PIRPEANLLLA DNVTDKL*VPGKSALC
Subject   1267  FFKGFNKISLKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTVVCANPSTTFTCITYDASFQLFDV*FLPVVISTPLPPMYFLQKITSRPK*GLL*HTPHSK*SPASFISINDDDTASLPIRPEANLLLATDNVTDKL*VPGKSALC  1791

Range 4: 1268 to 1762 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
336.9 bits(729) 0.0 159/165(96%) 0/165(0%) Minus/Minus
Query        2  EEDAHWGN*Q*PYTHYTQFRV*ETTRVEVLIYGHYLCYFVDTRPIFG*TTNVRLRISRINSGLC*PIDYVHLYYXXXXXXXXXXXXLTSGDLHSSPT*VFPTEDNFPS*VGFVVTHAALEVISRVVHQHKRR*FCVVSHKT*S*LITGYR*RN**ALSSGKVCSM  496
                +EDAHWGN*Q*PYTHYTQFRV*ETTRVEVLIYGHYLCYFVDTRPIFG*TTNVRLRISRINSGLC*PIDYVHLYYVRRLVPIVRRVVLTSGDLHSSPT VFPTEDNFPS*VGFVVTHAALEVISRVVHQHKRR*+CV SHKT*S*LITGYR*RN**ALS+GKVCS+
Subject   1268  KEDAHWGN*Q*PYTHYTQFRV*ETTRVEVLIYGHYLCYFVDTRPIFG*TTNVRLRISRINSGLC*PIDYVHLYYVRRLVPIVRRVVLTSGDLHSSPTYVFPTEDNFPS*VGFVVTHAALEVISRVVHQHKRR*YCVASHKT*S*LITGYR*RN**ALSTGKVCSL  1762

Range 5: 1441 to 1761 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
260.4 bits(562) 0.0 106/107(99%) 0/107(0%) Plus/Plus
Query      175  TGSYLL*EILRWERSGDHHW*ELHVEQLERGVVRNTSERSRWVSTDHC*FYLYANGR*WSTQKLDAYLQNNKDSVRRSEPLPWLFLRLETGCNAYKVTVSFPSAHLL  495
                TGSYLL*EI RWERSGDHHW*ELHVEQLERGVVRNTSERSRWVSTDHC*FYLYANGR*WSTQKLDAYLQNNKDSVRRSEPLPWLFLRLETGCNAYKVTVSFPSAHLL
Subject   1441  TGSYLL*EIHRWERSGDHHW*ELHVEQLERGVVRNTSERSRWVSTDHC*FYLYANGR*WSTQKLDAYLQNNKDSVRRSEPLPWLFLRLETGCNAYKVTVSFPSAHLL  1761

Range 6: 1267 to 1386 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.9 bits(155) 0.0 36/40(90%) 0/40(0%) Plus/Plus
Query        1  T*SRLSRNSKLISYVIDSQ**VSFRSYGKRRRIIVVYADE  120
                T SRLSR SKLISYVI SQ**VSFRSYGKRR IIVVYADE
Subject   1267  TKSRLSRYSKLISYVIGSQ**VSFRSYGKRRSIIVVYADE  1386

Range 7: 1272 to 1502 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
167.9 bits(360) 0.0 74/77(96%) 0/77(0%) Plus/Plus
Query        6  EQTFPELKAYQLRYR*PVIS*LQVLWETTQNHRRLC**TTREITSSAACVTTNPT*DGKLSSVGNT*VGEEWRSPLV  236
                EQTFP LKAYQLRYR*PVIS*LQVLWE TQ HRRLC**TTREITSSAACVTTNPT*DGKLSSVGNT*VGEEWRSPLV
Subject   1272  EQTFPVLKAYQLRYR*PVIS*LQVLWEATQYHRRLC**TTREITSSAACVTTNPT*DGKLSSVGNT*VGEEWRSPLV  1502

Range 8: 1557 to 1799 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
155.0 bits(332) 0.0 72/81(89%) 0/81(0%) Plus/Plus
Query      291  *SMG*HRPLLILLIRKRTLVVYPKIGRVSTK*QR*CP*IRTSTLVVSQTRNWV*CV*GHC*FPQCASSSKVSIRYP*RRRA  533
                *SMG*HRPLLILLIRKRTLVVYPKIGRVSTK*QR*CP*IRTSTLVVSQTRNWV*CV*GHC*FPQCASS  +S    *R R+
Subject   1557  *SMG*HRPLLILLIRKRTLVVYPKIGRVSTK*QR*CP*IRTSTLVVSQTRNWV*CV*GHC*FPQCASSLGISY*NL*RNRS  1799

Range 9: 1625 to 1789 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
107.8 bits(229) 0.0 47/55(85%) 0/55(0%) Plus/Minus
Query      493  LQRFQ*DIPKEDAHWGN*Q*PYTHYTQFRD*ETTNTEHPIYGH*LR*FVDTRPIF  657
                LQRFQ*DIPKEDAHWGN*Q*PYTHYTQFR *ETT  E  IYGH L  FVDTRPIF
Subject   1625  LQRFQ*DIPKEDAHWGN*Q*PYTHYTQFRV*ETTRVEVLIYGHYLCYFVDTRPIF  1789

Range 10: 1625 to 1792 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
104.6 bits(222) 0.0 45/56(80%) 0/56(0%) Minus/Plus
Query      490  KYWTCIYKLTQLVSVDRMLCIGCFSVSKLGVMRIRSLLVSPVRVFFRDILLKPLKK  657
                K WT IYK+T++VSVD+ L  GCFS SKLGVMRIRSLLVSPVR+FFRDILLKPLKK
Subject   1625  KNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFFRDILLKPLKK  1792

Range 11: 1629 to 1790 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
104.2 bits(221) 0.0 46/54(85%) 0/54(0%) Plus/Minus
Query      492  SSKVSIRYP*RRRALGKLTVTLYALHPVSRLRNNQYRASDLRTLTALICRYTSN  653
                SSKVSIRYP*RR ALGKLTVTLYALHPVS LRNNQ R SDLRTL+ L CRY SN
Subject   1629  SSKVSIRYP*RRCALGKLTVTLYALHPVSSLRNNQGRGSDLRTLSLLFCRYASN  1790

Range 12: 1629 to 1790 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
103.7 bits(220) 0.0 47/54(87%) 0/54(0%) Minus/Plus
Query      492  IGRVSTN*RS*CP*IGCSVLVVSQSRNWV*CV*GHC*FPQCASSLGISY*NL*R  653
                IGRVST *+ *CP*I  S LVVSQ+RNWV*CV*GHC*FPQCASSLGISY*NL*R
Subject   1629  IGRVSTK*QR*CP*IRTSTLVVSQTRNWV*CV*GHC*FPQCASSLGISY*NL*R  1790

Range 13: 1630 to 1791 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
102.8 bits(218) 0.0 45/54(83%) 0/54(0%) Minus/Plus
Query      491  LDVYLQINAVSVRRSDALYWLFLSLETGCNAYKVTVSFPSARLL*GYLIETFEE  652
                LD YLQ N  SVRRS+ L WLFL LETGCNAYKVTVSFPSA LL*GYLIETFEE
Subject   1630  LDAYLQNNKDSVRRSEPLPWLFLRLETGCNAYKVTVSFPSAHLL*GYLIETFEE  1791

Range 14: 1627 to 1791 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.8 bits(194) 0.0 43/55(78%) 0/55(0%) Plus/Minus
Query      491  FFKGFNKISLKKTRTGETNSDLIRITPSFETEKQPIQSIRSTDTNCVNL*IHVQY  655
                FFKGFNKISLKK RTGETNSDLIRITPSFE+EKQP     STDT  V L*I VQ+
Subject   1627  FFKGFNKISLKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQF  1791

Grapevine leafroll associated virus 3 isolate 6 15 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130299.1 Length: 4711 Number of Matches: 14

Range 1: 1271 to 1795 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
390.5 bits(846) 0.0 164/175(94%) 0/175(0%) Plus/Plus
Query        5  RADFPGTQSLSVTLSIASNKLASGLMGNDAESSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKYLGGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFFKGFNKISLKKT  529
                RADFP TQSLSVTLSIASNKLASGLMG+DA SSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKYLGGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFF+      LKK+
Subject   1271  RADFPNTQSLSVTLSIASNKLASGLMGSDAVSSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKYLGGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFFRDILLKPLKKS  1795

Range 2: 1269 to 1763 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
375.0 bits(812) 0.0 161/165(98%) 0/165(0%) Minus/Minus
Query        3  *RRCALGKLTVTLYALHPVSSLRNNQGRGSDLRTLSLLFCRYASNFWVDH*RPFAYK*N*QWSVLTHRLRSLVLRTTPRSNCSTCSSYQW*SPLLSHLSISYRR*LPVLSRVCCDTRRTRSNLPRRSSA*TTMILRRFP*DLKLTYYWLSIT*LISFEFRESLLY  497
                *RRCALGKLTVTLYALHPVSSLRNNQGRGSD RTLSLLFCRYASNFWVDH*RPFAYK*N*QWSVLTHRLRSLVLRTTPRSNCSTCSSYQW*SPLLSHLSISYRR*LPVLSRVCCDTRRTRSNLPRRSSA*TTMILRRFP*DLKLTYYWLSIT*LISFE+ ESLL+
Subject   1269  *RRCALGKLTVTLYALHPVSSLRNNQGRGSDPRTLSLLFCRYASNFWVDH*RPFAYK*N*QWSVLTHRLRSLVLRTTPRSNCSTCSSYQW*SPLLSHLSISYRR*LPVLSRVCCDTRRTRSNLPRRSSA*TTMILRRFP*DLKLTYYWLSIT*LISFEYWESLLF  1763

Range 3: 1267 to 1791 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
369.0 bits(799) 0.0 165/175(94%) 0/175(0%) Minus/Minus
Query        1  FFRDILLKPLKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTVVCANPSTTFTCITYDASFQLFDV*FLPVVISTPLPPKYFLQKITSRPK*GLL*HTPHSK*SPASFISINDDDSASFPIRPEANLLLAIDNVTDKL*VPGKSALC  525
                FF+      LKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTVVCANPSTTFTCITYDASFQLFDV*FLPVVISTPLPPKYFLQKITSRPK*GLL*HTPHSK*SPASFISINDDD+AS PIRPEANLLLAIDNVTDKL*V GKSALC
Subject   1267  FFKGFNKISLKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTVVCANPSTTFTCITYDASFQLFDV*FLPVVISTPLPPKYFLQKITSRPK*GLL*HTPHSK*SPASFISINDDDTASLPIRPEANLLLAIDNVTDKL*VLGKSALC  1791

Range 4: 1268 to 1762 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
335.6 bits(726) 0.0 159/165(96%) 0/165(0%) Minus/Minus
Query        2  EEDAHWGN*Q*PYTHYTQFRV*ETTRVEVLIYGHYLCYFVDTRPIFG*TTNVRLRISRINSGLC*PIDYVHLYYXXXXXXXXXXXXLTSGDLHSSPT*VFPTEDNFPS*VGFVVTHAALEVISRVVHQHKRR*FCVVSHKT*S*LITGYR*RN**ALSSGKVCSM  496
                +EDAHWGN*Q*PYTHYTQFRV*ETTRVEVLI+GHYLCYFVDTRPIFG*TTNVRLRISRINSGLC*PIDYVHLYYVRRLVPIVRRVVLTSGDLHSSPT*VFPTEDNFPS*VGFVVTHAALEVISRVVHQHKRR*+CV SHKT*S*LITGYR*RN**ALS GKVCS+
Subject   1268  KEDAHWGN*Q*PYTHYTQFRV*ETTRVEVLIHGHYLCYFVDTRPIFG*TTNVRLRISRINSGLC*PIDYVHLYYVRRLVPIVRRVVLTSGDLHSSPT*VFPTEDNFPS*VGFVVTHAALEVISRVVHQHKRR*YCVASHKT*S*LITGYR*RN**ALSIGKVCSL  1762

Range 5: 1441 to 1761 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
260.4 bits(562) 0.0 106/107(99%) 0/107(0%) Plus/Plus
Query      175  TGSYLL*EILRWERSGDHHW*ELHVEQLERGVVRNTSERSRWVSTDHC*FYLYANGR*WSTQKLDAYLQNNKDSVRRSEPLPWLFLRLETGCNAYKVTVSFPSAHLL  495
                TGSYLL*EILRWERSGDHHW*ELHVEQLERGVVRNTSERSRWVSTDHC*FYLYANGR*WSTQKLDAYLQNNKDSVR SEPLPWLFLRLETGCNAYKVTVSFPSAHLL
Subject   1441  TGSYLL*EILRWERSGDHHW*ELHVEQLERGVVRNTSERSRWVSTDHC*FYLYANGR*WSTQKLDAYLQNNKDSVRGSEPLPWLFLRLETGCNAYKVTVSFPSAHLL  1761

Range 6: 1267 to 1386 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.3 bits(158) 0.0 36/40(90%) 0/40(0%) Plus/Plus
Query        1  T*SRLSRNSKLISYVIDSQ**VSFRSYGKRRRIIVVYADE  120
                T SRLS+ SKLISYVIDSQ**VSFRSYGKRR IIVVYADE
Subject   1267  TKSRLSQYSKLISYVIDSQ**VSFRSYGKRRSIIVVYADE  1386

Range 7: 1272 to 1502 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
167.4 bits(359) 0.0 74/77(96%) 0/77(0%) Plus/Plus
Query        6  EQTFPELKAYQLRYR*PVIS*LQVLWETTQNHRRLC**TTREITSSAACVTTNPT*DGKLSSVGNT*VGEEWRSPLV  236
                EQTFP LKAYQLRYR*PVIS*LQVLWE TQ HRRLC**TTREITSSAACVTTNPT*DGKLSSVGNT*VGEEWRSPLV
Subject   1272  EQTFPILKAYQLRYR*PVIS*LQVLWEATQYHRRLC**TTREITSSAACVTTNPT*DGKLSSVGNT*VGEEWRSPLV  1502

Range 8: 1557 to 1799 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
152.7 bits(327) 0.0 71/81(88%) 0/81(0%) Plus/Plus
Query      291  *SMG*HRPLLILLIRKRTLVVYPKIGRVSTK*QR*CP*IRTSTLVVSQTRNWV*CV*GHC*FPQCASSSKVSIRYP*RRRA  533
                *SMG*HRPLLILLIRKRTLVVYPKIGRVSTK*QR*CP IRTSTLVVSQTRNWV*CV*GHC*FPQCASS  +S    *R R+
Subject   1557  *SMG*HRPLLILLIRKRTLVVYPKIGRVSTK*QR*CPWIRTSTLVVSQTRNWV*CV*GHC*FPQCASSLGISY*NL*RNRS  1799

Range 9: 1625 to 1789 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
105.5 bits(224) 0.0 46/55(84%) 0/55(0%) Plus/Minus
Query      493  LQRFQ*DIPKEDAHWGN*Q*PYTHYTQFRD*ETTNTEHPIYGH*LR*FVDTRPIF  657
                LQRFQ*DIPKEDAHWGN*Q*PYTHYTQFR *ETT  E  I+GH L  FVDTRPIF
Subject   1625  LQRFQ*DIPKEDAHWGN*Q*PYTHYTQFRV*ETTRVEVLIHGHYLCYFVDTRPIF  1789

Range 10: 1625 to 1792 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
104.6 bits(222) 0.0 45/56(80%) 0/56(0%) Minus/Plus
Query      490  KYWTCIYKLTQLVSVDRMLCIGCFSVSKLGVMRIRSLLVSPVRVFFRDILLKPLKK  657
                K WT IYK+T++VSVD+ L  GCFS SKLGVMRIRSLLVSPVR+FFRDILLKPLKK
Subject   1625  KNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFFRDILLKPLKK  1792

Range 11: 1629 to 1790 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.4 bits(215) 0.0 46/54(85%) 0/54(0%) Minus/Plus
Query      492  IGRVSTN*RS*CP*IGCSVLVVSQSRNWV*CV*GHC*FPQCASSLGISY*NL*R  653
                IGRVST *+ *CP I  S LVVSQ+RNWV*CV*GHC*FPQCASSLGISY*NL*R
Subject   1629  IGRVSTK*QR*CPWIRTSTLVVSQTRNWV*CV*GHC*FPQCASSLGISY*NL*R  1790

Range 12: 1629 to 1790 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.0 bits(214) 0.0 45/54(83%) 0/54(0%) Plus/Minus
Query      492  SSKVSIRYP*RRRALGKLTVTLYALHPVSRLRNNQYRASDLRTLTALICRYTSN  653
                SSKVSIRYP*RR ALGKLTVTLYALHPVS LRNNQ R SD RTL+ L CRY SN
Subject   1629  SSKVSIRYP*RRCALGKLTVTLYALHPVSSLRNNQGRGSDPRTLSLLFCRYASN  1790

Range 13: 1630 to 1791 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
99.6 bits(211) 0.0 44/54(81%) 0/54(0%) Minus/Plus
Query      491  LDVYLQINAVSVRRSDALYWLFLSLETGCNAYKVTVSFPSARLL*GYLIETFEE  652
                LD YLQ N  SVR S+ L WLFL LETGCNAYKVTVSFPSA LL*GYLIETFEE
Subject   1630  LDAYLQNNKDSVRGSEPLPWLFLRLETGCNAYKVTVSFPSAHLL*GYLIETFEE  1791

Range 14: 1627 to 1791 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.8 bits(194) 0.0 43/55(78%) 0/55(0%) Plus/Minus
Query      491  FFKGFNKISLKKTRTGETNSDLIRITPSFETEKQPIQSIRSTDTNCVNL*IHVQY  655
                FFKGFNKISLKK RTGETNSDLIRITPSFE+EKQP     STDT  V L*I VQ+
Subject   1627  FFKGFNKISLKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQF  1791

Grapevine leafroll associated virus 3 isolate 7 3 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130308.1 Length: 4711 Number of Matches: 14

Range 1: 1271 to 1795 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
390.5 bits(846) 0.0 164/175(94%) 0/175(0%) Plus/Plus
Query        5  RADFPGTQSLSVTLSIASNKLASGLMGNDAESSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKYLGGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFFKGFNKISLKKT  529
                RADFP TQSLSVTLSIASNKLASGLMG+DA SSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKYLGGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFF+      LKK+
Subject   1271  RADFPNTQSLSVTLSIASNKLASGLMGSDAVSSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKYLGGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFFRDILLKPLKKS  1795

Range 2: 1269 to 1763 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
375.4 bits(813) 0.0 161/165(98%) 0/165(0%) Minus/Minus
Query        3  *RRCALGKLTVTLYALHPVSSLRNNQGRGSDLRTLSLLFCRYASNFWVDH*RPFAYK*N*QWSVLTHRLRSLVLRTTPRSNCSTCSSYQW*SPLLSHLSISYRR*LPVLSRVCCDTRRTRSNLPRRSSA*TTMILRRFP*DLKLTYYWLSIT*LISFEFRESLLY  497
                *RRCALGKLTVTLYALHPVSSLRNNQGRGSDLRTL LLFCRYASNFWVDH*RPFAYK*N*QWSVLTHRLRSLVLRTTPRSNCSTCSSYQW*SPLLSHLSISYRR*LPVLSRVCCDTRRTRSNLPRRSSA*TTMILRRFP*DLKLTYYWLSIT*LISFE+ ESLL+
Subject   1269  *RRCALGKLTVTLYALHPVSSLRNNQGRGSDLRTLFLLFCRYASNFWVDH*RPFAYK*N*QWSVLTHRLRSLVLRTTPRSNCSTCSSYQW*SPLLSHLSISYRR*LPVLSRVCCDTRRTRSNLPRRSSA*TTMILRRFP*DLKLTYYWLSIT*LISFEYWESLLF  1763

Range 3: 1267 to 1791 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
369.0 bits(799) 0.0 165/175(94%) 0/175(0%) Minus/Minus
Query        1  FFRDILLKPLKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTVVCANPSTTFTCITYDASFQLFDV*FLPVVISTPLPPKYFLQKITSRPK*GLL*HTPHSK*SPASFISINDDDSASFPIRPEANLLLAIDNVTDKL*VPGKSALC  525
                FF+      LKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTVVCANPSTTFTCITYDASFQLFDV*FLPVVISTPLPPKYFLQKITSRPK*GLL*HTPHSK*SPASFISINDDD+AS PIRPEANLLLAIDNVTDKL*V GKSALC
Subject   1267  FFKGFNKISLKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTVVCANPSTTFTCITYDASFQLFDV*FLPVVISTPLPPKYFLQKITSRPK*GLL*HTPHSK*SPASFISINDDDTASLPIRPEANLLLAIDNVTDKL*VLGKSALC  1791

Range 4: 1268 to 1762 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
336.0 bits(727) 0.0 159/165(96%) 0/165(0%) Minus/Minus
Query        2  EEDAHWGN*Q*PYTHYTQFRV*ETTRVEVLIYGHYLCYFVDTRPIFG*TTNVRLRISRINSGLC*PIDYVHLYYXXXXXXXXXXXXLTSGDLHSSPT*VFPTEDNFPS*VGFVVTHAALEVISRVVHQHKRR*FCVVSHKT*S*LITGYR*RN**ALSSGKVCSM  496
                +EDAHWGN*Q*PYTHYTQFRV*ETTRVEVLIYGHY CYFVDTRPIFG*TTNVRLRISRINSGLC*PIDYVHLYYVRRLVPIVRRVVLTSGDLHSSPT*VFPTEDNFPS*VGFVVTHAALEVISRVVHQHKRR*+CV SHKT*S*LITGYR*RN**ALS GKVCS+
Subject   1268  KEDAHWGN*Q*PYTHYTQFRV*ETTRVEVLIYGHYFCYFVDTRPIFG*TTNVRLRISRINSGLC*PIDYVHLYYVRRLVPIVRRVVLTSGDLHSSPT*VFPTEDNFPS*VGFVVTHAALEVISRVVHQHKRR*YCVASHKT*S*LITGYR*RN**ALSIGKVCSL  1762

Range 5: 1441 to 1761 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
261.3 bits(564) 0.0 106/107(99%) 0/107(0%) Plus/Plus
Query      175  TGSYLL*EILRWERSGDHHW*ELHVEQLERGVVRNTSERSRWVSTDHC*FYLYANGR*WSTQKLDAYLQNNKDSVRRSEPLPWLFLRLETGCNAYKVTVSFPSAHLL  495
                TGSYLL*EILRWERSGDHHW*ELHVEQLERGVVRNTSERSRWVSTDHC*FYLYANGR*WSTQKLDAYLQNNK+SVRRSEPLPWLFLRLETGCNAYKVTVSFPSAHLL
Subject   1441  TGSYLL*EILRWERSGDHHW*ELHVEQLERGVVRNTSERSRWVSTDHC*FYLYANGR*WSTQKLDAYLQNNKNSVRRSEPLPWLFLRLETGCNAYKVTVSFPSAHLL  1761

Range 6: 1267 to 1386 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.3 bits(158) 0.0 36/40(90%) 0/40(0%) Plus/Plus
Query        1  T*SRLSRNSKLISYVIDSQ**VSFRSYGKRRRIIVVYADE  120
                T SRLS+ SKLISYVIDSQ**VSFRSYGKRR IIVVYADE
Subject   1267  TKSRLSQYSKLISYVIDSQ**VSFRSYGKRRSIIVVYADE  1386

Range 7: 1272 to 1502 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
167.4 bits(359) 0.0 74/77(96%) 0/77(0%) Plus/Plus
Query        6  EQTFPELKAYQLRYR*PVIS*LQVLWETTQNHRRLC**TTREITSSAACVTTNPT*DGKLSSVGNT*VGEEWRSPLV  236
                EQTFP LKAYQLRYR*PVIS*LQVLWE TQ HRRLC**TTREITSSAACVTTNPT*DGKLSSVGNT*VGEEWRSPLV
Subject   1272  EQTFPILKAYQLRYR*PVIS*LQVLWEATQYHRRLC**TTREITSSAACVTTNPT*DGKLSSVGNT*VGEEWRSPLV  1502

Range 8: 1557 to 1799 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
153.7 bits(329) 0.0 71/81(88%) 0/81(0%) Plus/Plus
Query      291  *SMG*HRPLLILLIRKRTLVVYPKIGRVSTK*QR*CP*IRTSTLVVSQTRNWV*CV*GHC*FPQCASSSKVSIRYP*RRRA  533
                *SMG*HRPLLILLIRKRTLVVYPKIGRVSTK*Q+*CP*IRTSTLVVSQTRNWV*CV*GHC*FPQCASS  +S    *R R+
Subject   1557  *SMG*HRPLLILLIRKRTLVVYPKIGRVSTK*QK*CP*IRTSTLVVSQTRNWV*CV*GHC*FPQCASSLGISY*NL*RNRS  1799

Range 9: 1625 to 1789 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.0 bits(225) 0.0 46/55(84%) 0/55(0%) Plus/Minus
Query      493  LQRFQ*DIPKEDAHWGN*Q*PYTHYTQFRD*ETTNTEHPIYGH*LR*FVDTRPIF  657
                LQRFQ*DIPKEDAHWGN*Q*PYTHYTQFR *ETT  E  IYGH    FVDTRPIF
Subject   1625  LQRFQ*DIPKEDAHWGN*Q*PYTHYTQFRV*ETTRVEVLIYGHYFCYFVDTRPIF  1789

Range 10: 1625 to 1792 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
104.6 bits(222) 0.0 45/56(80%) 0/56(0%) Minus/Plus
Query      490  KYWTCIYKLTQLVSVDRMLCIGCFSVSKLGVMRIRSLLVSPVRVFFRDILLKPLKK  657
                K WT IYK+T++VSVD+ L  GCFS SKLGVMRIRSLLVSPVR+FFRDILLKPLKK
Subject   1625  KNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFFRDILLKPLKK  1792

Range 11: 1629 to 1790 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
104.2 bits(221) 0.0 47/54(87%) 0/54(0%) Minus/Plus
Query      492  IGRVSTN*RS*CP*IGCSVLVVSQSRNWV*CV*GHC*FPQCASSLGISY*NL*R  653
                IGRVST *+ *CP*I  S LVVSQ+RNWV*CV*GHC*FPQCASSLGISY*NL*R
Subject   1629  IGRVSTK*QK*CP*IRTSTLVVSQTRNWV*CV*GHC*FPQCASSLGISY*NL*R  1790

Range 12: 1630 to 1791 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
102.8 bits(218) 0.0 45/54(83%) 0/54(0%) Minus/Plus
Query      491  LDVYLQINAVSVRRSDALYWLFLSLETGCNAYKVTVSFPSARLL*GYLIETFEE  652
                LD YLQ N  SVRRS+ L WLFL LETGCNAYKVTVSFPSA LL*GYLIETFEE
Subject   1630  LDAYLQNNKNSVRRSEPLPWLFLRLETGCNAYKVTVSFPSAHLL*GYLIETFEE  1791

Range 13: 1629 to 1790 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
102.8 bits(218) 0.0 46/54(85%) 0/54(0%) Plus/Minus
Query      492  SSKVSIRYP*RRRALGKLTVTLYALHPVSRLRNNQYRASDLRTLTALICRYTSN  653
                SSKVSIRYP*RR ALGKLTVTLYALHPVS LRNNQ R SDLRTL  L CRY SN
Subject   1629  SSKVSIRYP*RRCALGKLTVTLYALHPVSSLRNNQGRGSDLRTLFLLFCRYASN  1790

Range 14: 1627 to 1791 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.8 bits(194) 0.0 43/55(78%) 0/55(0%) Plus/Minus
Query      491  FFKGFNKISLKKTRTGETNSDLIRITPSFETEKQPIQSIRSTDTNCVNL*IHVQY  655
                FFKGFNKISLKK RTGETNSDLIRITPSFE+EKQP     STDT  V L*I VQ+
Subject   1627  FFKGFNKISLKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQF  1791

Grapevine leafroll associated virus 3 isolate 8 6 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130315.1 Length: 4711 Number of Matches: 14

Range 1: 1271 to 1795 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
390.5 bits(846) 0.0 164/175(94%) 0/175(0%) Plus/Plus
Query        5  RADFPGTQSLSVTLSIASNKLASGLMGNDAESSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKYLGGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFFKGFNKISLKKT  529
                RADFP TQSLSVTLSIASNKLASGLMG+DA SSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKYLGGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFF+      LKK+
Subject   1271  RADFPNTQSLSVTLSIASNKLASGLMGSDAVSSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKYLGGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFFRDILLKPLKKS  1795

Range 2: 1269 to 1763 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
375.4 bits(813) 0.0 161/165(98%) 0/165(0%) Minus/Minus
Query        3  *RRCALGKLTVTLYALHPVSSLRNNQGRGSDLRTLSLLFCRYASNFWVDH*RPFAYK*N*QWSVLTHRLRSLVLRTTPRSNCSTCSSYQW*SPLLSHLSISYRR*LPVLSRVCCDTRRTRSNLPRRSSA*TTMILRRFP*DLKLTYYWLSIT*LISFEFRESLLY  497
                *RRCALGKL VTLYALHPVSSLRNNQGRGSDLRTLSLLFCRYASNFWVDH*RPFAYK*N*QWSVLTHRLRSLVLRTTPRSNCSTCSSYQW*SPLLSHLSISYRR*LPVLSRVCCDTRRTRSNLPRRSSA*TTMILRRFP*DLKLTYYWLSIT*LISFE+ ESLL+
Subject   1269  *RRCALGKLIVTLYALHPVSSLRNNQGRGSDLRTLSLLFCRYASNFWVDH*RPFAYK*N*QWSVLTHRLRSLVLRTTPRSNCSTCSSYQW*SPLLSHLSISYRR*LPVLSRVCCDTRRTRSNLPRRSSA*TTMILRRFP*DLKLTYYWLSIT*LISFEYWESLLF  1763

Range 3: 1267 to 1791 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
369.0 bits(799) 0.0 165/175(94%) 0/175(0%) Minus/Minus
Query        1  FFRDILLKPLKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTVVCANPSTTFTCITYDASFQLFDV*FLPVVISTPLPPKYFLQKITSRPK*GLL*HTPHSK*SPASFISINDDDSASFPIRPEANLLLAIDNVTDKL*VPGKSALC  525
                FF+      LKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTVVCANPSTTFTCITYDASFQLFDV*FLPVVISTPLPPKYFLQKITSRPK*GLL*HTPHSK*SPASFISINDDD+AS PIRPEANLLLAIDNVTDKL*V GKSALC
Subject   1267  FFKGFNKISLKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTVVCANPSTTFTCITYDASFQLFDV*FLPVVISTPLPPKYFLQKITSRPK*GLL*HTPHSK*SPASFISINDDDTASLPIRPEANLLLAIDNVTDKL*VLGKSALC  1791

Range 4: 1268 to 1762 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
333.7 bits(722) 0.0 159/165(96%) 0/165(0%) Minus/Minus
Query        2  EEDAHWGN*Q*PYTHYTQFRV*ETTRVEVLIYGHYLCYFVDTRPIFG*TTNVRLRISRINSGLC*PIDYVHLYYXXXXXXXXXXXXLTSGDLHSSPT*VFPTEDNFPS*VGFVVTHAALEVISRVVHQHKRR*FCVVSHKT*S*LITGYR*RN**ALSSGKVCSM  496
                +EDAHWGN* *PYTHYTQFRV*ETTRVEVLIYGHYLCYFVDTRPIFG*TTNVRLRISRINSGLC*PIDYVHLYYVRRLVPIVRRVVLTSGDLHSSPT*VFPTEDNFPS*VGFVVTHAALEVISRVVHQHKRR*+CV SHKT*S*LITGYR*RN**ALS GKVCS+
Subject   1268  KEDAHWGN***PYTHYTQFRV*ETTRVEVLIYGHYLCYFVDTRPIFG*TTNVRLRISRINSGLC*PIDYVHLYYVRRLVPIVRRVVLTSGDLHSSPT*VFPTEDNFPS*VGFVVTHAALEVISRVVHQHKRR*YCVASHKT*S*LITGYR*RN**ALSIGKVCSL  1762

Range 5: 1441 to 1761 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
263.2 bits(568) 0.0 106/107(99%) 0/107(0%) Plus/Plus
Query      175  TGSYLL*EILRWERSGDHHW*ELHVEQLERGVVRNTSERSRWVSTDHC*FYLYANGR*WSTQKLDAYLQNNKDSVRRSEPLPWLFLRLETGCNAYKVTVSFPSAHLL  495
                TGSYLL*EILRWERSGDHHW*ELHVEQLERGVVRNTSERSRWVSTDHC*FYLYANGR*WSTQKLDAYLQNNKDSVRRSEPLPWLFLRLETGCNAYKVT+SFPSAHLL
Subject   1441  TGSYLL*EILRWERSGDHHW*ELHVEQLERGVVRNTSERSRWVSTDHC*FYLYANGR*WSTQKLDAYLQNNKDSVRRSEPLPWLFLRLETGCNAYKVTISFPSAHLL  1761

Range 6: 1267 to 1386 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.3 bits(158) 0.0 36/40(90%) 0/40(0%) Plus/Plus
Query        1  T*SRLSRNSKLISYVIDSQ**VSFRSYGKRRRIIVVYADE  120
                T SRLS+ SKLISYVIDSQ**VSFRSYGKRR IIVVYADE
Subject   1267  TKSRLSQYSKLISYVIDSQ**VSFRSYGKRRSIIVVYADE  1386

Range 7: 1272 to 1502 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
167.4 bits(359) 0.0 74/77(96%) 0/77(0%) Plus/Plus
Query        6  EQTFPELKAYQLRYR*PVIS*LQVLWETTQNHRRLC**TTREITSSAACVTTNPT*DGKLSSVGNT*VGEEWRSPLV  236
                EQTFP LKAYQLRYR*PVIS*LQVLWE TQ HRRLC**TTREITSSAACVTTNPT*DGKLSSVGNT*VGEEWRSPLV
Subject   1272  EQTFPILKAYQLRYR*PVIS*LQVLWEATQYHRRLC**TTREITSSAACVTTNPT*DGKLSSVGNT*VGEEWRSPLV  1502

Range 8: 1557 to 1799 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
150.0 bits(321) 0.0 71/81(88%) 0/81(0%) Plus/Plus
Query      291  *SMG*HRPLLILLIRKRTLVVYPKIGRVSTK*QR*CP*IRTSTLVVSQTRNWV*CV*GHC*FPQCASSSKVSIRYP*RRRA  533
                *SMG*HRPLLILLIRKRTLVVYPKIGRVSTK*QR*CP*IRTSTLVVSQTRNWV*CV*GH *FPQCASS  +S    *R R+
Subject   1557  *SMG*HRPLLILLIRKRTLVVYPKIGRVSTK*QR*CP*IRTSTLVVSQTRNWV*CV*GHY*FPQCASSLGISY*NL*RNRS  1799

Range 9: 1625 to 1792 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
104.6 bits(222) 0.0 45/56(80%) 0/56(0%) Minus/Plus
Query      490  KYWTCIYKLTQLVSVDRMLCIGCFSVSKLGVMRIRSLLVSPVRVFFRDILLKPLKK  657
                K WT IYK+T++VSVD+ L  GCFS SKLGVMRIRSLLVSPVR+FFRDILLKPLKK
Subject   1625  KNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFFRDILLKPLKK  1792

Range 10: 1625 to 1789 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
103.7 bits(220) 0.0 46/55(84%) 0/55(0%) Plus/Minus
Query      493  LQRFQ*DIPKEDAHWGN*Q*PYTHYTQFRD*ETTNTEHPIYGH*LR*FVDTRPIF  657
                LQRFQ*DIPKEDAHWGN* *PYTHYTQFR *ETT  E  IYGH L  FVDTRPIF
Subject   1625  LQRFQ*DIPKEDAHWGN***PYTHYTQFRV*ETTRVEVLIYGHYLCYFVDTRPIF  1789

Range 11: 1630 to 1791 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
102.3 bits(217) 0.0 44/54(81%) 0/54(0%) Minus/Plus
Query      491  LDVYLQINAVSVRRSDALYWLFLSLETGCNAYKVTVSFPSARLL*GYLIETFEE  652
                LD YLQ N  SVRRS+ L WLFL LETGCNAYKVT+SFPSA LL*GYLIETFEE
Subject   1630  LDAYLQNNKDSVRRSEPLPWLFLRLETGCNAYKVTISFPSAHLL*GYLIETFEE  1791

Range 12: 1629 to 1790 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.4 bits(215) 0.0 45/54(83%) 0/54(0%) Plus/Minus
Query      492  SSKVSIRYP*RRRALGKLTVTLYALHPVSRLRNNQYRASDLRTLTALICRYTSN  653
                SSKVSIRYP*RR ALGKL VTLYALHPVS LRNNQ R SDLRTL+ L CRY SN
Subject   1629  SSKVSIRYP*RRCALGKLIVTLYALHPVSSLRNNQGRGSDLRTLSLLFCRYASN  1790

Range 13: 1629 to 1790 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.7 bits(209) 0.0 46/54(85%) 0/54(0%) Minus/Plus
Query      492  IGRVSTN*RS*CP*IGCSVLVVSQSRNWV*CV*GHC*FPQCASSLGISY*NL*R  653
                IGRVST *+ *CP*I  S LVVSQ+RNWV*CV*GH *FPQCASSLGISY*NL*R
Subject   1629  IGRVSTK*QR*CP*IRTSTLVVSQTRNWV*CV*GHY*FPQCASSLGISY*NL*R  1790

Range 14: 1627 to 1791 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.8 bits(194) 0.0 43/55(78%) 0/55(0%) Plus/Minus
Query      491  FFKGFNKISLKKTRTGETNSDLIRITPSFETEKQPIQSIRSTDTNCVNL*IHVQY  655
                FFKGFNKISLKK RTGETNSDLIRITPSFE+EKQP     STDT  V L*I VQ+
Subject   1627  FFKGFNKISLKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQF  1791

Grapevine leafroll associated virus 3 isolate 8 8 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130316.1 Length: 4711 Number of Matches: 14

Range 1: 1271 to 1795 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
390.5 bits(846) 0.0 164/175(94%) 0/175(0%) Plus/Plus
Query        5  RADFPGTQSLSVTLSIASNKLASGLMGNDAESSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKYLGGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFFKGFNKISLKKT  529
                RADFP TQSLSVTLSIASNKLASGLMG+DA SSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKYLGGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFF+      LKK+
Subject   1271  RADFPNTQSLSVTLSIASNKLASGLMGSDAVSSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKYLGGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFFRDILLKPLKKS  1795

Range 2: 1269 to 1763 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
375.4 bits(813) 0.0 161/165(98%) 0/165(0%) Minus/Minus
Query        3  *RRCALGKLTVTLYALHPVSSLRNNQGRGSDLRTLSLLFCRYASNFWVDH*RPFAYK*N*QWSVLTHRLRSLVLRTTPRSNCSTCSSYQW*SPLLSHLSISYRR*LPVLSRVCCDTRRTRSNLPRRSSA*TTMILRRFP*DLKLTYYWLSIT*LISFEFRESLLY  497
                *RRCALGKL VTLYALHPVSSLRNNQGRGSDLRTLSLLFCRYASNFWVDH*RPFAYK*N*QWSVLTHRLRSLVLRTTPRSNCSTCSSYQW*SPLLSHLSISYRR*LPVLSRVCCDTRRTRSNLPRRSSA*TTMILRRFP*DLKLTYYWLSIT*LISFE+ ESLL+
Subject   1269  *RRCALGKLIVTLYALHPVSSLRNNQGRGSDLRTLSLLFCRYASNFWVDH*RPFAYK*N*QWSVLTHRLRSLVLRTTPRSNCSTCSSYQW*SPLLSHLSISYRR*LPVLSRVCCDTRRTRSNLPRRSSA*TTMILRRFP*DLKLTYYWLSIT*LISFEYWESLLF  1763

Range 3: 1267 to 1791 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
369.0 bits(799) 0.0 165/175(94%) 0/175(0%) Minus/Minus
Query        1  FFRDILLKPLKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTVVCANPSTTFTCITYDASFQLFDV*FLPVVISTPLPPKYFLQKITSRPK*GLL*HTPHSK*SPASFISINDDDSASFPIRPEANLLLAIDNVTDKL*VPGKSALC  525
                FF+      LKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTVVCANPSTTFTCITYDASFQLFDV*FLPVVISTPLPPKYFLQKITSRPK*GLL*HTPHSK*SPASFISINDDD+AS PIRPEANLLLAIDNVTDKL*V GKSALC
Subject   1267  FFKGFNKISLKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTVVCANPSTTFTCITYDASFQLFDV*FLPVVISTPLPPKYFLQKITSRPK*GLL*HTPHSK*SPASFISINDDDTASLPIRPEANLLLAIDNVTDKL*VLGKSALC  1791

Range 4: 1268 to 1762 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
333.7 bits(722) 0.0 159/165(96%) 0/165(0%) Minus/Minus
Query        2  EEDAHWGN*Q*PYTHYTQFRV*ETTRVEVLIYGHYLCYFVDTRPIFG*TTNVRLRISRINSGLC*PIDYVHLYYXXXXXXXXXXXXLTSGDLHSSPT*VFPTEDNFPS*VGFVVTHAALEVISRVVHQHKRR*FCVVSHKT*S*LITGYR*RN**ALSSGKVCSM  496
                +EDAHWGN* *PYTHYTQFRV*ETTRVEVLIYGHYLCYFVDTRPIFG*TTNVRLRISRINSGLC*PIDYVHLYYVRRLVPIVRRVVLTSGDLHSSPT*VFPTEDNFPS*VGFVVTHAALEVISRVVHQHKRR*+CV SHKT*S*LITGYR*RN**ALS GKVCS+
Subject   1268  KEDAHWGN***PYTHYTQFRV*ETTRVEVLIYGHYLCYFVDTRPIFG*TTNVRLRISRINSGLC*PIDYVHLYYVRRLVPIVRRVVLTSGDLHSSPT*VFPTEDNFPS*VGFVVTHAALEVISRVVHQHKRR*YCVASHKT*S*LITGYR*RN**ALSIGKVCSL  1762

Range 5: 1441 to 1761 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
263.2 bits(568) 0.0 106/107(99%) 0/107(0%) Plus/Plus
Query      175  TGSYLL*EILRWERSGDHHW*ELHVEQLERGVVRNTSERSRWVSTDHC*FYLYANGR*WSTQKLDAYLQNNKDSVRRSEPLPWLFLRLETGCNAYKVTVSFPSAHLL  495
                TGSYLL*EILRWERSGDHHW*ELHVEQLERGVVRNTSERSRWVSTDHC*FYLYANGR*WSTQKLDAYLQNNKDSVRRSEPLPWLFLRLETGCNAYKVT+SFPSAHLL
Subject   1441  TGSYLL*EILRWERSGDHHW*ELHVEQLERGVVRNTSERSRWVSTDHC*FYLYANGR*WSTQKLDAYLQNNKDSVRRSEPLPWLFLRLETGCNAYKVTISFPSAHLL  1761

Range 6: 1267 to 1386 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.3 bits(158) 0.0 36/40(90%) 0/40(0%) Plus/Plus
Query        1  T*SRLSRNSKLISYVIDSQ**VSFRSYGKRRRIIVVYADE  120
                T SRLS+ SKLISYVIDSQ**VSFRSYGKRR IIVVYADE
Subject   1267  TKSRLSQYSKLISYVIDSQ**VSFRSYGKRRSIIVVYADE  1386

Range 7: 1272 to 1502 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
167.4 bits(359) 0.0 74/77(96%) 0/77(0%) Plus/Plus
Query        6  EQTFPELKAYQLRYR*PVIS*LQVLWETTQNHRRLC**TTREITSSAACVTTNPT*DGKLSSVGNT*VGEEWRSPLV  236
                EQTFP LKAYQLRYR*PVIS*LQVLWE TQ HRRLC**TTREITSSAACVTTNPT*DGKLSSVGNT*VGEEWRSPLV
Subject   1272  EQTFPILKAYQLRYR*PVIS*LQVLWEATQYHRRLC**TTREITSSAACVTTNPT*DGKLSSVGNT*VGEEWRSPLV  1502

Range 8: 1557 to 1799 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
150.0 bits(321) 0.0 71/81(88%) 0/81(0%) Plus/Plus
Query      291  *SMG*HRPLLILLIRKRTLVVYPKIGRVSTK*QR*CP*IRTSTLVVSQTRNWV*CV*GHC*FPQCASSSKVSIRYP*RRRA  533
                *SMG*HRPLLILLIRKRTLVVYPKIGRVSTK*QR*CP*IRTSTLVVSQTRNWV*CV*GH *FPQCASS  +S    *R R+
Subject   1557  *SMG*HRPLLILLIRKRTLVVYPKIGRVSTK*QR*CP*IRTSTLVVSQTRNWV*CV*GHY*FPQCASSLGISY*NL*RNRS  1799

Range 9: 1625 to 1792 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
104.6 bits(222) 0.0 45/56(80%) 0/56(0%) Minus/Plus
Query      490  KYWTCIYKLTQLVSVDRMLCIGCFSVSKLGVMRIRSLLVSPVRVFFRDILLKPLKK  657
                K WT IYK+T++VSVD+ L  GCFS SKLGVMRIRSLLVSPVR+FFRDILLKPLKK
Subject   1625  KNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFFRDILLKPLKK  1792

Range 10: 1625 to 1789 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
103.7 bits(220) 0.0 46/55(84%) 0/55(0%) Plus/Minus
Query      493  LQRFQ*DIPKEDAHWGN*Q*PYTHYTQFRD*ETTNTEHPIYGH*LR*FVDTRPIF  657
                LQRFQ*DIPKEDAHWGN* *PYTHYTQFR *ETT  E  IYGH L  FVDTRPIF
Subject   1625  LQRFQ*DIPKEDAHWGN***PYTHYTQFRV*ETTRVEVLIYGHYLCYFVDTRPIF  1789

Range 11: 1630 to 1791 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
102.3 bits(217) 0.0 44/54(81%) 0/54(0%) Minus/Plus
Query      491  LDVYLQINAVSVRRSDALYWLFLSLETGCNAYKVTVSFPSARLL*GYLIETFEE  652
                LD YLQ N  SVRRS+ L WLFL LETGCNAYKVT+SFPSA LL*GYLIETFEE
Subject   1630  LDAYLQNNKDSVRRSEPLPWLFLRLETGCNAYKVTISFPSAHLL*GYLIETFEE  1791

Range 12: 1629 to 1790 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.4 bits(215) 0.0 45/54(83%) 0/54(0%) Plus/Minus
Query      492  SSKVSIRYP*RRRALGKLTVTLYALHPVSRLRNNQYRASDLRTLTALICRYTSN  653
                SSKVSIRYP*RR ALGKL VTLYALHPVS LRNNQ R SDLRTL+ L CRY SN
Subject   1629  SSKVSIRYP*RRCALGKLIVTLYALHPVSSLRNNQGRGSDLRTLSLLFCRYASN  1790

Range 13: 1629 to 1790 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.7 bits(209) 0.0 46/54(85%) 0/54(0%) Minus/Plus
Query      492  IGRVSTN*RS*CP*IGCSVLVVSQSRNWV*CV*GHC*FPQCASSLGISY*NL*R  653
                IGRVST *+ *CP*I  S LVVSQ+RNWV*CV*GH *FPQCASSLGISY*NL*R
Subject   1629  IGRVSTK*QR*CP*IRTSTLVVSQTRNWV*CV*GHY*FPQCASSLGISY*NL*R  1790

Range 14: 1627 to 1791 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.8 bits(194) 0.0 43/55(78%) 0/55(0%) Plus/Minus
Query      491  FFKGFNKISLKKTRTGETNSDLIRITPSFETEKQPIQSIRSTDTNCVNL*IHVQY  655
                FFKGFNKISLKK RTGETNSDLIRITPSFE+EKQP     STDT  V L*I VQ+
Subject   1627  FFKGFNKISLKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQF  1791

Nucleotide Sequence (897 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
90
180
270
360
450
540
630
720
810
897

Descriptions

Alignments

Grapevine leafroll associated virus 3 isolate 3138 07, complete genome

Sequence ID: JX559645.1 Length: 18498 Number of Matches: 12

Range 1: 7696 to 8586 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
666.4 bits(1448) 0.0 295/297(99%) 0/297(0%) Minus/Plus
Query        2  SSVGLPKRNTLKCNLVTFENRNFNADRGCNVGCDDSVAHELKEIFFEEVVNKARLAEVTESHLSSNTMLLSDWLDKRAPNAYKSLKRALGSFVFHPSMLTSYTLMVKADVKPKLDNTPLSKYVTGQNIVYHDRRVTALFSCIFTACVERLKYVVDERWLFYHGMDTAELAVALRNNLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNXXXXXXXXXXXLRGLDYSYIVVSGDDSLIFSRQPLDIDTS  892
                SSVGLPKRNTLKCNLVTFENRNFNADRGCNVGCDDSVAHELKEIFFEEVVNKARLAEVTESHLSSNTMLLSDWLDKRAPNAYKSLKRALGSFVFHPSMLTSYTLMVKADVKPKLDNTPLSKYVTGQNIVYHDR VTALFSCIFTACVERLKYVVDERWLFYHGMDTAELA ALRNNLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNSLVLCTLLSVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTS
Subject   7696  SSVGLPKRNTLKCNLVTFENRNFNADRGCNVGCDDSVAHELKEIFFEEVVNKARLAEVTESHLSSNTMLLSDWLDKRAPNAYKSLKRALGSFVFHPSMLTSYTLMVKADVKPKLDNTPLSKYVTGQNIVYHDRCVTALFSCIFTACVERLKYVVDERWLFYHGMDTAELAAALRNNLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNSLVLCTLLSVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTS  8586

Range 2: 7694 to 8587 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
642.1 bits(1395) 0.0 278/298(93%) 0/298(0%) Plus/Minus
Query        1  PTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSSFSRRYHTHHKRK*TKLLYQHQXXXXXXXXXXXXEHSEICRTY*YPVHRCSIAGCPPNCSSMQPPTPQCPSRGRRATFHPLHISNALRTQ*RCRRKAQLRVYRGRLYSAPLRTSTMAYCPTWVLRLLSP*AYKTST*TDERQTNLKPA*ETCKR*VPFCPTNLITTSCCWTNGFPSPLLNELC*RPPRRKSPSVHAPQSHHNPRYNRDRR*NSCSQTLPGCTLMCCASVNLH*T  894
                PTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSSFSRRYHTHHKRK*TKLLYQHQVSRVSTPPPVS*EHSEICRTY*YPVHRCSIAGCPPNCSSMQ PTPQCPSRGRRATF  L I +ALRTQ*+C++KAQLR YRGRLYSAPLRTSTMAYCPTWVLRLLSP*AYKTST*TDERQTNLKPA*ETCKR*VPFCPTNLITTSCCWTNGFPSPLLNELC*RPPRRKSPSVHAPQS HNPRYNRDRR*NS  QT  G T  CCA VNL *T
Subject   7694  PTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSSFSRRYHTHHKRK*TKLLYQHQVSRVSTPPPVS*EHSEICRTY*YPVHRCSIAGCPPNCSSMQLPTPQCPSRGRRATFRLLRILSALRTQ*KCKKKAQLRTYRGRLYSAPLRTSTMAYCPTWVLRLLSP*AYKTST*TDERQTNLKPA*ETCKR*VPFCPTNLITTSCCWTNGFPSPLLNELC*RPPRRKSPSVHAPQSRHNPRYNRDRR*NSYFQT*RGYTSRCCALVNLR*T  8587

Range 3: 7693 to 8586 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
614.6 bits(1335) 0.0 276/298(93%) 0/298(0%) Plus/Minus
Query        2  RRINI*RLPTKYEAXXXXXXXXXXXXSPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHRSHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQIVPQCNRQLRSVHPVVEEPPFIHYIFQTLYARSKDAGEKRSYASIVVDYILPRYVLRQWRIVQLGFYVCFHHKRIRRQHRRMKDKRT*SPLERLVSVRCPFVQPI**QHRVAGQMAFRHLC*TSFVNDLLEENLLQFMRHRVITTHVTTAIGVEIPVLKRYQVAL*CVALR*TYTRP  895
                RRINI*RLPTKYEAIITTNYNITII*SPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHRSHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQIVPQC+ QLRSVHPVVEEPPF++Y+F  LYARSK+A +KRSYA IVVDYILPRYVLRQWRIVQLGFYVCFHH+RIRRQHRRMKDKRT*SPLERLVSVRCPFVQPI**QHRVAGQMAFRHLC*TSFVNDLLEENLLQFMRHRV+TTHVTTAIGVEIP+ KR +V L  VAL *TY RP
Subject   7693  RRINI*RLPTKYEAIITTNYNITII*SPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHRSHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQIVPQCSCQLRSVHPVVEEPPFVYYVF*ALYARSKNARKKRSYAPIVVDYILPRYVLRQWRIVQLGFYVCFHHERIRRQHRRMKDKRT*SPLERLVSVRCPFVQPI**QHRVAGQMAFRHLC*TSFVNDLLEENLLQFMRHRVVTTHVTTAIGVEIPIFKRDEVTLQGVALW*TYARP  8586

Range 4: 7695 to 8585 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
593.5 bits(1289) 0.0 277/297(93%) 0/297(0%) Minus/Plus
Query        3  V*CRFTEAQHIKVQPGNV*EQEFQRRSRL*RGL**LCGA*TEGDFLXXXXXXXXXXXGDGKPFVQQHDVVIRLVGQKGT*RLQVSQAGFRFVCLSSVYVDVLYAYGESRRKTQVGQYAIVEVRNGAEYSLPR*TRNCAFLLHLYCVRRAFEICSG*KVALLPRDGHCGVGGCIEEQFGGHPAILHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RRENDDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YV  893
                V* RFT+AQH++V P +V*+ EFQRRSRL*RGL* LCGA*TEGDFLRGGR*QSSFSRGDGKPFVQQHDVVIRLVGQKGT*RLQVSQAGFRFVCLSSVYVDVLYA+GESRRKTQVGQYAIVEVRNGAEYSLPR* RNCAF LH YCVRRA +I S  KVALLPRDGHCGVG CIEEQFGGHPAILHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RRENDDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YV
Subject   7695  V*RRFTKAQHLEV*PRHV*K*EFQRRSRL*RGL*RLCGA*TEGDFLRGGR*QSSFSRGDGKPFVQQHDVVIRLVGQKGT*RLQVSQAGFRFVCLSSVYVDVLYAHGESRRKTQVGQYAIVEVRNGAEYSLPR*VRNCAFFLHFYCVRRALKIRSRRKVALLPRDGHCGVGSCIEEQFGGHPAILHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RRENDDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YV  8585

Range 5: 7959 to 8249 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
220.1 bits(474) 0.0 94/97(97%) 0/97(0%) Plus/Minus
Query      339  V*YCRMSPKLFLNATANSAVSIPW*KSHLSSTTYFKRSTHAVKMQEKSAVTRLSW*TIFCPVTYFDNGVLSNLGFTSAFTISV*DVNIDG*KTNEPK  629
                V*YCRMSPKLFLNA ANSAVSIPW*KSHLSSTTYFKRSTHAVKMQEKSAVT LSW*TIFCPVTYFDNGVLSNLGFTSAFT+SV*DVNIDG*KTNEPK
Subject   7959  V*YCRMSPKLFLNAAANSAVSIPW*KSHLSSTTYFKRSTHAVKMQEKSAVTHLSW*TIFCPVTYFDNGVLSNLGFTSAFTMSV*DVNIDG*KTNEPK  8249

Range 6: 8289 to 8510 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
175.2 bits(376) 0.0 74/74(100%) 0/74(0%) Plus/Minus
Query       78  NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA  299
                NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA
Subject   8289  NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA  8510

Range 7: 7695 to 7919 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
171.5 bits(368) 0.0 74/75(99%) 0/75(0%) Plus/Minus
Query      669  SNQSDNNIVLLDKWLSVTSAKRALLTTSSKKISFSSCATESSQPTLQPRSALKFLFSNVTRLHFNVLRFGKPTLD  893
                SNQSDNNIVLLDKWLSVTSAKRALLTTSSKKISFSSCATESSQPTLQPRSALKFLFSNVTRLHF VLRFGKPTLD
Subject   7695  SNQSDNNIVLLDKWLSVTSAKRALLTTSSKKISFSSCATESSQPTLQPRSALKFLFSNVTRLHFKVLRFGKPTLD  7919

Range 8: 8547 to 8585 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.1 bits(68) 0.0 13/13(100%) 0/13(0%) Plus/Minus
Query        3  DVSISNGCRLNMR  41
                DVSISNGCRLNMR
Subject   8547  DVSISNGCRLNMR  8585

Range 9: 8096 to 8509 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
296.2 bits(640) 0.0 130/138(94%) 0/138(0%) Minus/Plus
Query       79  A*LRFSPASLLRA*SV*NM*WMKGGSSTTGWTLRSWRLH*GTIWGTSGNTTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*ER*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD  492
                A*LRF  A LLRA*S *N *  KGGSSTTGWTLRSW+LH*GTIWGTSGNTTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*ER*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD
Subject   8096  A*LRFFLAFLLRA*SA*NT**TKGGSSTTGWTLRSWQLH*GTIWGTSGNTTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*ER*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD  8509

Range 10: 7694 to 7930 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
137.2 bits(293) 0.0 70/79(89%) 0/79(0%) Minus/Plus
Query      658  GLV*VYRSATH*SATW*RLRTGISTPIAVVTWVVMTLWRMNXXXXXXXXSLTKLV*QR*RKAICPATRCCYQIGWTKGH  894
                GL *VY+SAT *S T  RL+ GISTPIAVVTWVV TLWRMN*RRFSSRRSLTKLV*QR*RKAICPATRCCYQIGWTKGH
Subject   7694  GLA*VYQSATP*SVTSSRLKIGISTPIAVVTWVVTTLWRMN*RRFSSRRSLTKLV*QR*RKAICPATRCCYQIGWTKGH  7930

Range 11: 8009 to 8053 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
42.8 bits(87) 0.0 15/15(100%) 0/15(0%) Minus/Plus
Query      535  W*KQT*NPSWTIRHC  579
                W*KQT*NPSWTIRHC
Subject   8009  W*KQT*NPSWTIRHC  8053

Range 12: 8540 to 8587 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.0 bits(70) 0.0 16/16(100%) 0/16(0%) Minus/Plus
Query        1  MIASYLVGSR*ILIRR  48
                MIASYLVGSR*ILIRR
Subject   8540  MIASYLVGSR*ILIRR  8587

Grapevine leafroll associated virus 3, complete genome

Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 12

Range 1: 7117 to 8007 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
666.4 bits(1448) 0.0 295/297(99%) 0/297(0%) Minus/Plus
Query        2  SSVGLPKRNTLKCNLVTFENRNFNADRGCNVGCDDSVAHELKEIFFEEVVNKARLAEVTESHLSSNTMLLSDWLDKRAPNAYKSLKRALGSFVFHPSMLTSYTLMVKADVKPKLDNTPLSKYVTGQNIVYHDRRVTALFSCIFTACVERLKYVVDERWLFYHGMDTAELAVALRNNLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNXXXXXXXXXXXLRGLDYSYIVVSGDDSLIFSRQPLDIDTS  892
                SSVGLPKRNTLKCNLVTFENRNFNADRGCNVGCDDSVAHELKEIFFEEVVNKARLAEVTESHLSSNTMLLSDWLDKRAPNAYKSLKRALGSFVFHPSMLTSYTLMVKADVKPKLDNTPLSKYVTGQNIVYHDR VTALFSCIFTACVERLKYVVDERWLFYHGMDTAELA ALRNNLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNSLVLCTLLSVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTS
Subject   7117  SSVGLPKRNTLKCNLVTFENRNFNADRGCNVGCDDSVAHELKEIFFEEVVNKARLAEVTESHLSSNTMLLSDWLDKRAPNAYKSLKRALGSFVFHPSMLTSYTLMVKADVKPKLDNTPLSKYVTGQNIVYHDRCVTALFSCIFTACVERLKYVVDERWLFYHGMDTAELAAALRNNLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNSLVLCTLLSVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTS  8007

Range 2: 7115 to 8008 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
641.6 bits(1394) 0.0 276/298(93%) 0/298(0%) Plus/Minus
Query        1  PTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSSFSRRYHTHHKRK*TKLLYQHQXXXXXXXXXXXXEHSEICRTY*YPVHRCSIAGCPPNCSSMQPPTPQCPSRGRRATFHPLHISNALRTQ*RCRRKAQLRVYRGRLYSAPLRTSTMAYCPTWVLRLLSP*AYKTST*TDERQTNLKPA*ETCKR*VPFCPTNLITTSCCWTNGFPSPLLNELC*RPPRRKSPSVHAPQSHHNPRYNRDRR*NSCSQTLPGCTLMCCASVNLH*T  894
                PTYQY TAAD*I*GYHH *LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSSFSRRYHTHHKRK*TKLLYQHQVSRVSTPPP S*EHSEICRTY*YPVHRCSIAGCPPNCSSMQPPTPQCPSRGRRATF PL I +ALRTQ*+C++KAQLR YRGRLYSAPLRTSTMAYCPTWVLRLLSP*AYK ST*TDERQTNLKPA*ETCKR*VPFCPTNLITTSCCWTNGFPSPLLNELC*RPPRRKSPSVHAPQS HNPRYNRDRR*NS  QT  G T  CCA VNL *T
Subject   7115  PTYQYPTAAD*I*GYHHR*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSSFSRRYHTHHKRK*TKLLYQHQVSRVSTPPPAS*EHSEICRTY*YPVHRCSIAGCPPNCSSMQPPTPQCPSRGRRATFRPLRILSALRTQ*KCKKKAQLRTYRGRLYSAPLRTSTMAYCPTWVLRLLSP*AYKKST*TDERQTNLKPA*ETCKR*VPFCPTNLITTSCCWTNGFPSPLLNELC*RPPRRKSPSVHAPQSRHNPRYNRDRR*NSYFQT*RGYTSRCCALVNLR*T  8008

Range 3: 7114 to 8007 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
611.4 bits(1328) 0.0 273/298(92%) 0/298(0%) Plus/Minus
Query        2  RRINI*RLPTKYEAXXXXXXXXXXXXSPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHRSHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQIVPQCNRQLRSVHPVVEEPPFIHYIFQTLYARSKDAGEKRSYASIVVDYILPRYVLRQWRIVQLGFYVCFHHKRIRRQHRRMKDKRT*SPLERLVSVRCPFVQPI**QHRVAGQMAFRHLC*TSFVNDLLEENLLQFMRHRVITTHVTTAIGVEIPVLKRYQVAL*CVALR*TYTRP  895
                RRINI RLPTKY+AIIT NYNITII*SPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHRSHDAIILTTKESRQNFSINTKCQEYQLLHL HESTLRFVVLTDIQFIGVVLPDVPQIVPQC+RQLRSVHPVVEEPPF+HY+F  LYARSK+A +KRSYA IVVDYILPRYVLRQWRIVQLGFYVCFHH+RIR QHRRMKDKRT*SPLERLVSVRCPFVQPI**QHRVAGQMAFRHLC*TSFVNDLLEENLLQFMRHRV+TTHVTTAIGVEIP+ KR +V L  VAL *TY RP
Subject   7114  RRINIQRLPTKYKAIITANYNITII*SPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHRSHDAIILTTKESRQNFSINTKCQEYQLLHLLHESTLRFVVLTDIQFIGVVLPDVPQIVPQCSRQLRSVHPVVEEPPFVHYVF*ALYARSKNARKKRSYAPIVVDYILPRYVLRQWRIVQLGFYVCFHHERIRSQHRRMKDKRT*SPLERLVSVRCPFVQPI**QHRVAGQMAFRHLC*TSFVNDLLEENLLQFMRHRVVTTHVTTAIGVEIPIFKRDEVTLQGVALW*TYARP  8007

Range 4: 7116 to 8006 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
583.0 bits(1266) 0.0 274/297(92%) 0/297(0%) Minus/Plus
Query        3  V*CRFTEAQHIKVQPGNV*EQEFQRRSRL*RGL**LCGA*TEGDFLXXXXXXXXXXXGDGKPFVQQHDVVIRLVGQKGT*RLQVSQAGFRFVCLSSVYVDVLYAYGESRRKTQVGQYAIVEVRNGAEYSLPR*TRNCAFLLHLYCVRRAFEICSG*KVALLPRDGHCGVGGCIEEQFGGHPAILHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RRENDDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YV  893
                V* RFT+AQH++V P +V*+ EFQRRSRL*RGL* LCGA*TEGDFLRGGR*QSSFSRGDGKPFVQQHDVVIRLVGQKGT*RLQVSQAGFRFVCLSSVYVD LYA+GESRRKTQVGQYAIVEVRNGAEYSLPR* RNCAF LH YCVRRA +I SG KVALLPRDGHCGVGGCIEEQFGGHPAILHL*TGYQ*VRQISECSHE GGGVDTLDTWC**RSFVYFLLW*V**RRENDDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS* ***P+I*SAAV Y*YV
Subject   7116  V*RRFTKAQHLEV*PRHV*K*EFQRRSRL*RGL*RLCGA*TEGDFLRGGR*QSSFSRGDGKPFVQQHDVVIRLVGQKGT*RLQVSQAGFRFVCLSSVYVDFLYAHGESRRKTQVGQYAIVEVRNGAEYSLPR*VRNCAFFLHFYCVRRALKIRSGRKVALLPRDGHCGVGGCIEEQFGGHPAILHL*TGYQ*VRQISECSHEAGGGVDTLDTWC**RSFVYFLLW*V**RRENDDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*R***PYI*SAAVGY*YV  8006

Range 5: 7380 to 7670 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
218.3 bits(470) 0.0 93/97(96%) 0/97(0%) Plus/Minus
Query      339  V*YCRMSPKLFLNATANSAVSIPW*KSHLSSTTYFKRSTHAVKMQEKSAVTRLSW*TIFCPVTYFDNGVLSNLGFTSAFTISV*DVNIDG*KTNEPK  629
                V*YCRMSPKLFLNA ANSAVSIPW*KSHLSSTTYFKRSTHAVKMQEKSAVT LSW*TIFCPVTYFDNGVLSNLGFTSAFT+SV*+VNIDG*KTNEPK
Subject   7380  V*YCRMSPKLFLNAAANSAVSIPW*KSHLSSTTYFKRSTHAVKMQEKSAVTHLSW*TIFCPVTYFDNGVLSNLGFTSAFTMSV*EVNIDG*KTNEPK  7670

Range 6: 7710 to 7931 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
175.2 bits(376) 0.0 74/74(100%) 0/74(0%) Plus/Minus
Query       78  NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA  299
                NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA
Subject   7710  NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA  7931

Range 7: 7116 to 7340 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
171.5 bits(368) 0.0 74/75(99%) 0/75(0%) Plus/Minus
Query      669  SNQSDNNIVLLDKWLSVTSAKRALLTTSSKKISFSSCATESSQPTLQPRSALKFLFSNVTRLHFNVLRFGKPTLD  893
                SNQSDNNIVLLDKWLSVTSAKRALLTTSSKKISFSSCATESSQPTLQPRSALKFLFSNVTRLHF VLRFGKPTLD
Subject   7116  SNQSDNNIVLLDKWLSVTSAKRALLTTSSKKISFSSCATESSQPTLQPRSALKFLFSNVTRLHFKVLRFGKPTLD  7340

Range 8: 7968 to 8006 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
32.2 bits(64) 0.0 12/13(92%) 0/13(0%) Plus/Minus
Query        3  DVSISNGCRLNMR  41
                DVSISNGCRLN+R
Subject   7968  DVSISNGCRLNIR  8006

Range 9: 7517 to 7930 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
302.6 bits(654) 0.0 131/138(95%) 0/138(0%) Minus/Plus
Query       79  A*LRFSPASLLRA*SV*NM*WMKGGSSTTGWTLRSWRLH*GTIWGTSGNTTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*ER*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD  492
                A*LRF  A LLRA*S *N *W KGGSSTTGWTLRSWRLH*GTIWGTSGNTTPMNWISVSTTNLRVLS*+RWRS*YS*HLVLIEKFCLLSFVVSMIAS*ER*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD
Subject   7517  A*LRFFLAFLLRA*SA*NT*WTKGGSSTTGWTLRSWRLH*GTIWGTSGNTTPMNWISVSTTNLRVLS*SRWRS*YS*HLVLIEKFCLLSFVVSMIAS*ER*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD  7930

Range 10: 7115 to 7351 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
137.2 bits(293) 0.0 70/79(89%) 0/79(0%) Minus/Plus
Query      658  GLV*VYRSATH*SATW*RLRTGISTPIAVVTWVVMTLWRMNXXXXXXXXSLTKLV*QR*RKAICPATRCCYQIGWTKGH  894
                GL *VY+SAT *S T  RL+ GISTPIAVVTWVV TLWRMN*RRFSSRRSLTKLV*QR*RKAICPATRCCYQIGWTKGH
Subject   7115  GLA*VYQSATP*SVTSSRLKIGISTPIAVVTWVVTTLWRMN*RRFSSRRSLTKLV*QR*RKAICPATRCCYQIGWTKGH  7351

Range 11: 7430 to 7474 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
42.8 bits(87) 0.0 15/15(100%) 0/15(0%) Minus/Plus
Query      535  W*KQT*NPSWTIRHC  579
                W*KQT*NPSWTIRHC
Subject   7430  W*KQT*NPSWTIRHC  7474

Range 12: 7961 to 8008 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.9 bits(59) 0.0 14/16(88%) 0/16(0%) Minus/Plus
Query        1  MIASYLVGSR*ILIRR  48
                MIA YLVGSR ILIRR
Subject   7961  MIALYLVGSRWILIRR  8008

Grapevine leafroll associated virus 3, complete genome

Sequence ID: AF037268.2 Length: 17919 Number of Matches: 12

Range 1: 7117 to 8007 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
666.4 bits(1448) 0.0 295/297(99%) 0/297(0%) Minus/Plus
Query        2  SSVGLPKRNTLKCNLVTFENRNFNADRGCNVGCDDSVAHELKEIFFEEVVNKARLAEVTESHLSSNTMLLSDWLDKRAPNAYKSLKRALGSFVFHPSMLTSYTLMVKADVKPKLDNTPLSKYVTGQNIVYHDRRVTALFSCIFTACVERLKYVVDERWLFYHGMDTAELAVALRNNLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNXXXXXXXXXXXLRGLDYSYIVVSGDDSLIFSRQPLDIDTS  892
                SSVGLPKRNTLKCNLVTFENRNFNADRGCNVGCDDSVAHELKEIFFEEVVNKARLAEVTESHLSSNTMLLSDWLDKRAPNAYKSLKRALGSFVFHPSMLTSYTLMVKADVKPKLDNTPLSKYVTGQNIVYHDR VTALFSCIFTACVERLKYVVDERWLFYHGMDTAELA ALRNNLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNSLVLCTLLSVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTS
Subject   7117  SSVGLPKRNTLKCNLVTFENRNFNADRGCNVGCDDSVAHELKEIFFEEVVNKARLAEVTESHLSSNTMLLSDWLDKRAPNAYKSLKRALGSFVFHPSMLTSYTLMVKADVKPKLDNTPLSKYVTGQNIVYHDRCVTALFSCIFTACVERLKYVVDERWLFYHGMDTAELAAALRNNLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNSLVLCTLLSVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTS  8007

Range 2: 7115 to 8008 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
641.6 bits(1394) 0.0 276/298(93%) 0/298(0%) Plus/Minus
Query        1  PTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSSFSRRYHTHHKRK*TKLLYQHQXXXXXXXXXXXXEHSEICRTY*YPVHRCSIAGCPPNCSSMQPPTPQCPSRGRRATFHPLHISNALRTQ*RCRRKAQLRVYRGRLYSAPLRTSTMAYCPTWVLRLLSP*AYKTST*TDERQTNLKPA*ETCKR*VPFCPTNLITTSCCWTNGFPSPLLNELC*RPPRRKSPSVHAPQSHHNPRYNRDRR*NSCSQTLPGCTLMCCASVNLH*T  894
                PTYQY TAAD*I*GYHH *LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSSFSRRYHTHHKRK*TKLLYQHQVSRVSTPPP S*EHSEICRTY*YPVHRCSIAGCPPNCSSMQPPTPQCPSRGRRATF PL I +ALRTQ*+C++KAQLR YRGRLYSAPLRTSTMAYCPTWVLRLLSP*AYK ST*TDERQTNLKPA*ETCKR*VPFCPTNLITTSCCWTNGFPSPLLNELC*RPPRRKSPSVHAPQS HNPRYNRDRR*NS  QT  G T  CCA VNL *T
Subject   7115  PTYQYPTAAD*I*GYHHR*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSSFSRRYHTHHKRK*TKLLYQHQVSRVSTPPPAS*EHSEICRTY*YPVHRCSIAGCPPNCSSMQPPTPQCPSRGRRATFRPLRILSALRTQ*KCKKKAQLRTYRGRLYSAPLRTSTMAYCPTWVLRLLSP*AYKKST*TDERQTNLKPA*ETCKR*VPFCPTNLITTSCCWTNGFPSPLLNELC*RPPRRKSPSVHAPQSRHNPRYNRDRR*NSYFQT*RGYTSRCCALVNLR*T  8008

Range 3: 7114 to 8007 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
611.4 bits(1328) 0.0 273/298(92%) 0/298(0%) Plus/Minus
Query        2  RRINI*RLPTKYEAXXXXXXXXXXXXSPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHRSHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQIVPQCNRQLRSVHPVVEEPPFIHYIFQTLYARSKDAGEKRSYASIVVDYILPRYVLRQWRIVQLGFYVCFHHKRIRRQHRRMKDKRT*SPLERLVSVRCPFVQPI**QHRVAGQMAFRHLC*TSFVNDLLEENLLQFMRHRVITTHVTTAIGVEIPVLKRYQVAL*CVALR*TYTRP  895
                RRINI RLPTKY+AIIT NYNITII*SPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHRSHDAIILTTKESRQNFSINTKCQEYQLLHL HESTLRFVVLTDIQFIGVVLPDVPQIVPQC+RQLRSVHPVVEEPPF+HY+F  LYARSK+A +KRSYA IVVDYILPRYVLRQWRIVQLGFYVCFHH+RIR QHRRMKDKRT*SPLERLVSVRCPFVQPI**QHRVAGQMAFRHLC*TSFVNDLLEENLLQFMRHRV+TTHVTTAIGVEIP+ KR +V L  VAL *TY RP
Subject   7114  RRINIQRLPTKYKAIITANYNITII*SPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHRSHDAIILTTKESRQNFSINTKCQEYQLLHLLHESTLRFVVLTDIQFIGVVLPDVPQIVPQCSRQLRSVHPVVEEPPFVHYVF*ALYARSKNARKKRSYAPIVVDYILPRYVLRQWRIVQLGFYVCFHHERIRSQHRRMKDKRT*SPLERLVSVRCPFVQPI**QHRVAGQMAFRHLC*TSFVNDLLEENLLQFMRHRVVTTHVTTAIGVEIPIFKRDEVTLQGVALW*TYARP  8007

Range 4: 7116 to 8006 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
583.0 bits(1266) 0.0 274/297(92%) 0/297(0%) Minus/Plus
Query        3  V*CRFTEAQHIKVQPGNV*EQEFQRRSRL*RGL**LCGA*TEGDFLXXXXXXXXXXXGDGKPFVQQHDVVIRLVGQKGT*RLQVSQAGFRFVCLSSVYVDVLYAYGESRRKTQVGQYAIVEVRNGAEYSLPR*TRNCAFLLHLYCVRRAFEICSG*KVALLPRDGHCGVGGCIEEQFGGHPAILHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RRENDDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YV  893
                V* RFT+AQH++V P +V*+ EFQRRSRL*RGL* LCGA*TEGDFLRGGR*QSSFSRGDGKPFVQQHDVVIRLVGQKGT*RLQVSQAGFRFVCLSSVYVD LYA+GESRRKTQVGQYAIVEVRNGAEYSLPR* RNCAF LH YCVRRA +I SG KVALLPRDGHCGVGGCIEEQFGGHPAILHL*TGYQ*VRQISECSHE GGGVDTLDTWC**RSFVYFLLW*V**RRENDDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS* ***P+I*SAAV Y*YV
Subject   7116  V*RRFTKAQHLEV*PRHV*K*EFQRRSRL*RGL*RLCGA*TEGDFLRGGR*QSSFSRGDGKPFVQQHDVVIRLVGQKGT*RLQVSQAGFRFVCLSSVYVDFLYAHGESRRKTQVGQYAIVEVRNGAEYSLPR*VRNCAFFLHFYCVRRALKIRSGRKVALLPRDGHCGVGGCIEEQFGGHPAILHL*TGYQ*VRQISECSHEAGGGVDTLDTWC**RSFVYFLLW*V**RRENDDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*R***PYI*SAAVGY*YV  8006

Range 5: 7380 to 7670 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
218.3 bits(470) 0.0 93/97(96%) 0/97(0%) Plus/Minus
Query      339  V*YCRMSPKLFLNATANSAVSIPW*KSHLSSTTYFKRSTHAVKMQEKSAVTRLSW*TIFCPVTYFDNGVLSNLGFTSAFTISV*DVNIDG*KTNEPK  629
                V*YCRMSPKLFLNA ANSAVSIPW*KSHLSSTTYFKRSTHAVKMQEKSAVT LSW*TIFCPVTYFDNGVLSNLGFTSAFT+SV*+VNIDG*KTNEPK
Subject   7380  V*YCRMSPKLFLNAAANSAVSIPW*KSHLSSTTYFKRSTHAVKMQEKSAVTHLSW*TIFCPVTYFDNGVLSNLGFTSAFTMSV*EVNIDG*KTNEPK  7670

Range 6: 7710 to 7931 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
175.2 bits(376) 0.0 74/74(100%) 0/74(0%) Plus/Minus
Query       78  NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA  299
                NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA
Subject   7710  NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA  7931

Range 7: 7116 to 7340 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
171.5 bits(368) 0.0 74/75(99%) 0/75(0%) Plus/Minus
Query      669  SNQSDNNIVLLDKWLSVTSAKRALLTTSSKKISFSSCATESSQPTLQPRSALKFLFSNVTRLHFNVLRFGKPTLD  893
                SNQSDNNIVLLDKWLSVTSAKRALLTTSSKKISFSSCATESSQPTLQPRSALKFLFSNVTRLHF VLRFGKPTLD
Subject   7116  SNQSDNNIVLLDKWLSVTSAKRALLTTSSKKISFSSCATESSQPTLQPRSALKFLFSNVTRLHFKVLRFGKPTLD  7340

Range 8: 7968 to 8006 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
32.2 bits(64) 0.0 12/13(92%) 0/13(0%) Plus/Minus
Query        3  DVSISNGCRLNMR  41
                DVSISNGCRLN+R
Subject   7968  DVSISNGCRLNIR  8006

Range 9: 7517 to 7930 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
302.6 bits(654) 0.0 131/138(95%) 0/138(0%) Minus/Plus
Query       79  A*LRFSPASLLRA*SV*NM*WMKGGSSTTGWTLRSWRLH*GTIWGTSGNTTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*ER*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD  492
                A*LRF  A LLRA*S *N *W KGGSSTTGWTLRSWRLH*GTIWGTSGNTTPMNWISVSTTNLRVLS*+RWRS*YS*HLVLIEKFCLLSFVVSMIAS*ER*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD
Subject   7517  A*LRFFLAFLLRA*SA*NT*WTKGGSSTTGWTLRSWRLH*GTIWGTSGNTTPMNWISVSTTNLRVLS*SRWRS*YS*HLVLIEKFCLLSFVVSMIAS*ER*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD  7930

Range 10: 7115 to 7351 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
137.2 bits(293) 0.0 70/79(89%) 0/79(0%) Minus/Plus
Query      658  GLV*VYRSATH*SATW*RLRTGISTPIAVVTWVVMTLWRMNXXXXXXXXSLTKLV*QR*RKAICPATRCCYQIGWTKGH  894
                GL *VY+SAT *S T  RL+ GISTPIAVVTWVV TLWRMN*RRFSSRRSLTKLV*QR*RKAICPATRCCYQIGWTKGH
Subject   7115  GLA*VYQSATP*SVTSSRLKIGISTPIAVVTWVVTTLWRMN*RRFSSRRSLTKLV*QR*RKAICPATRCCYQIGWTKGH  7351

Range 11: 7430 to 7474 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
42.8 bits(87) 0.0 15/15(100%) 0/15(0%) Minus/Plus
Query      535  W*KQT*NPSWTIRHC  579
                W*KQT*NPSWTIRHC
Subject   7430  W*KQT*NPSWTIRHC  7474

Range 12: 7961 to 8008 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.9 bits(59) 0.0 14/16(88%) 0/16(0%) Minus/Plus
Query        1  MIASYLVGSR*ILIRR  48
                MIA YLVGSR ILIRR
Subject   7961  MIALYLVGSRWILIRR  8008

Grapevine leafroll associated virus 3 isolate 621, complete genome

Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 12

Range 1: 7696 to 8586 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
666.4 bits(1448) 0.0 295/297(99%) 0/297(0%) Minus/Plus
Query        2  SSVGLPKRNTLKCNLVTFENRNFNADRGCNVGCDDSVAHELKEIFFEEVVNKARLAEVTESHLSSNTMLLSDWLDKRAPNAYKSLKRALGSFVFHPSMLTSYTLMVKADVKPKLDNTPLSKYVTGQNIVYHDRRVTALFSCIFTACVERLKYVVDERWLFYHGMDTAELAVALRNNLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNXXXXXXXXXXXLRGLDYSYIVVSGDDSLIFSRQPLDIDTS  892
                SSVGLPKRNTLKCNLVTFENRNFNADRGCNVGCDDSVAHELKEIFFEEVVNKARLAEVTESHLSSNTMLLSDWLDKRAPNAYKSLKRALGSFVFHPSMLTSYTLMVKADVKPKLDNTPLSKYVTGQNIVYHDR VTALFSCIFTACVERLKYVVDERWLFYHGMDTAELA ALRNNLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNSLVLCTLLSVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTS
Subject   7696  SSVGLPKRNTLKCNLVTFENRNFNADRGCNVGCDDSVAHELKEIFFEEVVNKARLAEVTESHLSSNTMLLSDWLDKRAPNAYKSLKRALGSFVFHPSMLTSYTLMVKADVKPKLDNTPLSKYVTGQNIVYHDRCVTALFSCIFTACVERLKYVVDERWLFYHGMDTAELAAALRNNLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNSLVLCTLLSVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTS  8586

Range 2: 7694 to 8587 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
646.7 bits(1405) 0.0 279/298(94%) 0/298(0%) Plus/Minus
Query        1  PTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSSFSRRYHTHHKRK*TKLLYQHQXXXXXXXXXXXXEHSEICRTY*YPVHRCSIAGCPPNCSSMQPPTPQCPSRGRRATFHPLHISNALRTQ*RCRRKAQLRVYRGRLYSAPLRTSTMAYCPTWVLRLLSP*AYKTST*TDERQTNLKPA*ETCKR*VPFCPTNLITTSCCWTNGFPSPLLNELC*RPPRRKSPSVHAPQSHHNPRYNRDRR*NSCSQTLPGCTLMCCASVNLH*T  894
                PTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSSFSRRYHTHHKRK*TKLLYQHQVSRVSTPPPVS*EHSEICRTY*YPVHRCSIAGCPPNCSSMQPPTPQCPSRGRRATF  L I +ALRTQ*+C++KAQLR YRGRLYSAPLRTSTMAYCPTWVLRLLSP*AYKTST*TDERQTNLKPA*ETCKR*VPFCPTNLITTSCCWTNGFPSPLLNELC*RPPRRKSPSVHAPQS HNPRYNRDRR*NS  QT  G T  CCA VNL *T
Subject   7694  PTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSSFSRRYHTHHKRK*TKLLYQHQVSRVSTPPPVS*EHSEICRTY*YPVHRCSIAGCPPNCSSMQPPTPQCPSRGRRATFRLLRILSALRTQ*KCKKKAQLRTYRGRLYSAPLRTSTMAYCPTWVLRLLSP*AYKTST*TDERQTNLKPA*ETCKR*VPFCPTNLITTSCCWTNGFPSPLLNELC*RPPRRKSPSVHAPQSRHNPRYNRDRR*NSYFQT*RGYTSRCCALVNLR*T  8587

Range 3: 7693 to 8586 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
618.3 bits(1343) 0.0 277/298(93%) 0/298(0%) Plus/Minus
Query        2  RRINI*RLPTKYEAXXXXXXXXXXXXSPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHRSHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQIVPQCNRQLRSVHPVVEEPPFIHYIFQTLYARSKDAGEKRSYASIVVDYILPRYVLRQWRIVQLGFYVCFHHKRIRRQHRRMKDKRT*SPLERLVSVRCPFVQPI**QHRVAGQMAFRHLC*TSFVNDLLEENLLQFMRHRVITTHVTTAIGVEIPVLKRYQVAL*CVALR*TYTRP  895
                RRINI*RLPTKYEAIITTNYNITII*SPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHRSHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQIVPQC+RQLRSVHPVVEEPPF++Y+F  LYARSK+A +KRSYA IVVDYILPRYVLRQWRIVQLGFYVCFHH+RIRRQHRRMKDKRT*SPLERLVSVRCPFVQPI**QHRVAGQMAFRHLC*TSFVNDLLEENLLQFMRHRV+TTHVTTAIGVEIP+ KR +V L  VAL *TY RP
Subject   7693  RRINI*RLPTKYEAIITTNYNITII*SPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHRSHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQIVPQCSRQLRSVHPVVEEPPFVYYVF*ALYARSKNARKKRSYAPIVVDYILPRYVLRQWRIVQLGFYVCFHHERIRRQHRRMKDKRT*SPLERLVSVRCPFVQPI**QHRVAGQMAFRHLC*TSFVNDLLEENLLQFMRHRVVTTHVTTAIGVEIPIFKRDEVTLQGVALW*TYARP  8586

Range 4: 7695 to 8585 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
596.3 bits(1295) 0.0 278/297(94%) 0/297(0%) Minus/Plus
Query        3  V*CRFTEAQHIKVQPGNV*EQEFQRRSRL*RGL**LCGA*TEGDFLXXXXXXXXXXXGDGKPFVQQHDVVIRLVGQKGT*RLQVSQAGFRFVCLSSVYVDVLYAYGESRRKTQVGQYAIVEVRNGAEYSLPR*TRNCAFLLHLYCVRRAFEICSG*KVALLPRDGHCGVGGCIEEQFGGHPAILHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RRENDDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YV  893
                V* RFT+AQH++V P +V*+ EFQRRSRL*RGL* LCGA*TEGDFLRGGR*QSSFSRGDGKPFVQQHDVVIRLVGQKGT*RLQVSQAGFRFVCLSSVYVDVLYA+GESRRKTQVGQYAIVEVRNGAEYSLPR* RNCAF LH YCVRRA +I S  KVALLPRDGHCGVGGCIEEQFGGHPAILHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RRENDDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YV
Subject   7695  V*RRFTKAQHLEV*PRHV*K*EFQRRSRL*RGL*RLCGA*TEGDFLRGGR*QSSFSRGDGKPFVQQHDVVIRLVGQKGT*RLQVSQAGFRFVCLSSVYVDVLYAHGESRRKTQVGQYAIVEVRNGAEYSLPR*VRNCAFFLHFYCVRRALKIRSRRKVALLPRDGHCGVGGCIEEQFGGHPAILHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RRENDDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YV  8585

Range 5: 7959 to 8249 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
220.1 bits(474) 0.0 94/97(97%) 0/97(0%) Plus/Minus
Query      339  V*YCRMSPKLFLNATANSAVSIPW*KSHLSSTTYFKRSTHAVKMQEKSAVTRLSW*TIFCPVTYFDNGVLSNLGFTSAFTISV*DVNIDG*KTNEPK  629
                V*YCRMSPKLFLNA ANSAVSIPW*KSHLSSTTYFKRSTHAVKMQEKSAVT LSW*TIFCPVTYFDNGVLSNLGFTSAFT+SV*DVNIDG*KTNEPK
Subject   7959  V*YCRMSPKLFLNAAANSAVSIPW*KSHLSSTTYFKRSTHAVKMQEKSAVTHLSW*TIFCPVTYFDNGVLSNLGFTSAFTMSV*DVNIDG*KTNEPK  8249

Range 6: 8289 to 8510 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
175.2 bits(376) 0.0 74/74(100%) 0/74(0%) Plus/Minus
Query       78  NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA  299
                NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA
Subject   8289  NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA  8510

Range 7: 7695 to 7919 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
171.5 bits(368) 0.0 74/75(99%) 0/75(0%) Plus/Minus
Query      669  SNQSDNNIVLLDKWLSVTSAKRALLTTSSKKISFSSCATESSQPTLQPRSALKFLFSNVTRLHFNVLRFGKPTLD  893
                SNQSDNNIVLLDKWLSVTSAKRALLTTSSKKISFSSCATESSQPTLQPRSALKFLFSNVTRLHF VLRFGKPTLD
Subject   7695  SNQSDNNIVLLDKWLSVTSAKRALLTTSSKKISFSSCATESSQPTLQPRSALKFLFSNVTRLHFKVLRFGKPTLD  7919

Range 8: 8547 to 8585 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.1 bits(68) 0.0 13/13(100%) 0/13(0%) Plus/Minus
Query        3  DVSISNGCRLNMR  41
                DVSISNGCRLNMR
Subject   8547  DVSISNGCRLNMR  8585

Range 9: 8096 to 8509 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
298.0 bits(644) 0.0 131/138(95%) 0/138(0%) Minus/Plus
Query       79  A*LRFSPASLLRA*SV*NM*WMKGGSSTTGWTLRSWRLH*GTIWGTSGNTTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*ER*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD  492
                A*LRF  A LLRA*S *N *  KGGSSTTGWTLRSWRLH*GTIWGTSGNTTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*ER*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD
Subject   8096  A*LRFFLAFLLRA*SA*NT**TKGGSSTTGWTLRSWRLH*GTIWGTSGNTTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*ER*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD  8509

Range 10: 7694 to 7930 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
137.2 bits(293) 0.0 70/79(89%) 0/79(0%) Minus/Plus
Query      658  GLV*VYRSATH*SATW*RLRTGISTPIAVVTWVVMTLWRMNXXXXXXXXSLTKLV*QR*RKAICPATRCCYQIGWTKGH  894
                GL *VY+SAT *S T  RL+ GISTPIAVVTWVV TLWRMN*RRFSSRRSLTKLV*QR*RKAICPATRCCYQIGWTKGH
Subject   7694  GLA*VYQSATP*SVTSSRLKIGISTPIAVVTWVVTTLWRMN*RRFSSRRSLTKLV*QR*RKAICPATRCCYQIGWTKGH  7930

Range 11: 8009 to 8053 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
42.8 bits(87) 0.0 15/15(100%) 0/15(0%) Minus/Plus
Query      535  W*KQT*NPSWTIRHC  579
                W*KQT*NPSWTIRHC
Subject   8009  W*KQT*NPSWTIRHC  8053

Range 12: 8540 to 8587 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.0 bits(70) 0.0 16/16(100%) 0/16(0%) Minus/Plus
Query        1  MIASYLVGSR*ILIRR  48
                MIASYLVGSR*ILIRR
Subject   8540  MIASYLVGSR*ILIRR  8587

Grapevine leafroll associated virus 3 isolate WA MR, complete genome

Sequence ID: GU983863.1 Length: 18498 Number of Matches: 12

Range 1: 7696 to 8586 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
666.4 bits(1448) 0.0 295/297(99%) 0/297(0%) Minus/Plus
Query        2  SSVGLPKRNTLKCNLVTFENRNFNADRGCNVGCDDSVAHELKEIFFEEVVNKARLAEVTESHLSSNTMLLSDWLDKRAPNAYKSLKRALGSFVFHPSMLTSYTLMVKADVKPKLDNTPLSKYVTGQNIVYHDRRVTALFSCIFTACVERLKYVVDERWLFYHGMDTAELAVALRNNLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNXXXXXXXXXXXLRGLDYSYIVVSGDDSLIFSRQPLDIDTS  892
                SSVGLPKRNTLKCNLVTFENRNFNADRGCNVGCDDSVAHELKEIFFEEVVNKARLAEVTESHLSSNTMLLSDWLDKRAPNAYKSLKRALGSFVFHPSMLTSYTLMVKADVKPKLDNTPLSKYVTGQNIVYHDR VTALFSCIFTACVERLKYVVDERWLFYHGMDTAELA ALRNNLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNSLVLCTLLSVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTS
Subject   7696  SSVGLPKRNTLKCNLVTFENRNFNADRGCNVGCDDSVAHELKEIFFEEVVNKARLAEVTESHLSSNTMLLSDWLDKRAPNAYKSLKRALGSFVFHPSMLTSYTLMVKADVKPKLDNTPLSKYVTGQNIVYHDRCVTALFSCIFTACVERLKYVVDERWLFYHGMDTAELAAALRNNLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNSLVLCTLLSVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTS  8586

Range 2: 7694 to 8587 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
644.4 bits(1400) 0.0 278/298(93%) 0/298(0%) Plus/Minus
Query        1  PTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSSFSRRYHTHHKRK*TKLLYQHQXXXXXXXXXXXXEHSEICRTY*YPVHRCSIAGCPPNCSSMQPPTPQCPSRGRRATFHPLHISNALRTQ*RCRRKAQLRVYRGRLYSAPLRTSTMAYCPTWVLRLLSP*AYKTST*TDERQTNLKPA*ETCKR*VPFCPTNLITTSCCWTNGFPSPLLNELC*RPPRRKSPSVHAPQSHHNPRYNRDRR*NSCSQTLPGCTLMCCASVNLH*T  894
                PTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSSFSRRYHTHHKRK*TKLLYQHQVSRVSTPPPVS*EHSEICRTY*YPVHRCS AGCPPNCSSMQPPTPQCPSRGRRATF  L I +ALRTQ*+C++KAQLR YRGRLYSAPLRTSTMAYCPTWVLRLLSP*AYKTST*TDERQTNLKPA*ETCKR*VPFCPTNLITTSCCWTNGFPSPLLNELC*RPPRRKSPSVHAPQS HNPRYNRDRR*NS  QT  G T  CCA VNL *T
Subject   7694  PTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSSFSRRYHTHHKRK*TKLLYQHQVSRVSTPPPVS*EHSEICRTY*YPVHRCSTAGCPPNCSSMQPPTPQCPSRGRRATFRLLRILSALRTQ*KCKKKAQLRTYRGRLYSAPLRTSTMAYCPTWVLRLLSP*AYKTST*TDERQTNLKPA*ETCKR*VPFCPTNLITTSCCWTNGFPSPLLNELC*RPPRRKSPSVHAPQSRHNPRYNRDRR*NSYFQT*RGYTSRCCALVNLR*T  8587

Range 3: 7693 to 8586 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
618.3 bits(1343) 0.0 277/298(93%) 0/298(0%) Plus/Minus
Query        2  RRINI*RLPTKYEAXXXXXXXXXXXXSPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHRSHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQIVPQCNRQLRSVHPVVEEPPFIHYIFQTLYARSKDAGEKRSYASIVVDYILPRYVLRQWRIVQLGFYVCFHHKRIRRQHRRMKDKRT*SPLERLVSVRCPFVQPI**QHRVAGQMAFRHLC*TSFVNDLLEENLLQFMRHRVITTHVTTAIGVEIPVLKRYQVAL*CVALR*TYTRP  895
                RRINI*RLPTKYEAIITTNYNITII*SPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHRSHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQIVPQC+RQLRSVHPVVEEPPF++Y+F  LYARSK+A +KRSYA IVVDYILPRYVLRQWRIVQLGFYVCFHH+RIRRQHRRMKDKRT*SPLERLVSVRCPFVQPI**QHRVAGQMAFRHLC*TSFVNDLLEENLLQFMRHRV+TTHVTTAIGVEIP+ KR +V L  VAL *TY RP
Subject   7693  RRINI*RLPTKYEAIITTNYNITII*SPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHRSHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQIVPQCSRQLRSVHPVVEEPPFVYYVF*ALYARSKNARKKRSYAPIVVDYILPRYVLRQWRIVQLGFYVCFHHERIRRQHRRMKDKRT*SPLERLVSVRCPFVQPI**QHRVAGQMAFRHLC*TSFVNDLLEENLLQFMRHRVVTTHVTTAIGVEIPIFKRDEVTLQGVALW*TYARP  8586

Range 4: 7695 to 8585 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
595.8 bits(1294) 0.0 277/297(93%) 0/297(0%) Minus/Plus
Query        3  V*CRFTEAQHIKVQPGNV*EQEFQRRSRL*RGL**LCGA*TEGDFLXXXXXXXXXXXGDGKPFVQQHDVVIRLVGQKGT*RLQVSQAGFRFVCLSSVYVDVLYAYGESRRKTQVGQYAIVEVRNGAEYSLPR*TRNCAFLLHLYCVRRAFEICSG*KVALLPRDGHCGVGGCIEEQFGGHPAILHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RRENDDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YV  893
                V* RFT+AQH++V P +V*+ EFQRRSRL*RGL* LCGA*TEGDFLRGGR*QSSFSRGDGKPFVQQHDVVIRLVGQKGT*RLQVSQAGFRFVCLSSVYVDVLYA+GESRRKTQVGQYAIVEVRNGAEYSLPR* RNCAF LH YCVRRA +I S  KVALLPRDGHCGVGGCIEEQFGGHPA+LHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RRENDDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YV
Subject   7695  V*RRFTKAQHLEV*PRHV*K*EFQRRSRL*RGL*RLCGA*TEGDFLRGGR*QSSFSRGDGKPFVQQHDVVIRLVGQKGT*RLQVSQAGFRFVCLSSVYVDVLYAHGESRRKTQVGQYAIVEVRNGAEYSLPR*VRNCAFFLHFYCVRRALKIRSRRKVALLPRDGHCGVGGCIEEQFGGHPAVLHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RRENDDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YV  8585

Range 5: 7959 to 8249 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
220.1 bits(474) 0.0 94/97(97%) 0/97(0%) Plus/Minus
Query      339  V*YCRMSPKLFLNATANSAVSIPW*KSHLSSTTYFKRSTHAVKMQEKSAVTRLSW*TIFCPVTYFDNGVLSNLGFTSAFTISV*DVNIDG*KTNEPK  629
                V*YCRMSPKLFLNA ANSAVSIPW*KSHLSSTTYFKRSTHAVKMQEKSAVT LSW*TIFCPVTYFDNGVLSNLGFTSAFT+SV*DVNIDG*KTNEPK
Subject   7959  V*YCRMSPKLFLNAAANSAVSIPW*KSHLSSTTYFKRSTHAVKMQEKSAVTHLSW*TIFCPVTYFDNGVLSNLGFTSAFTMSV*DVNIDG*KTNEPK  8249

Range 6: 8289 to 8510 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
175.2 bits(376) 0.0 74/74(100%) 0/74(0%) Plus/Minus
Query       78  NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA  299
                NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA
Subject   8289  NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA  8510

Range 7: 7695 to 7919 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
171.5 bits(368) 0.0 74/75(99%) 0/75(0%) Plus/Minus
Query      669  SNQSDNNIVLLDKWLSVTSAKRALLTTSSKKISFSSCATESSQPTLQPRSALKFLFSNVTRLHFNVLRFGKPTLD  893
                SNQSDNNIVLLDKWLSVTSAKRALLTTSSKKISFSSCATESSQPTLQPRSALKFLFSNVTRLHF VLRFGKPTLD
Subject   7695  SNQSDNNIVLLDKWLSVTSAKRALLTTSSKKISFSSCATESSQPTLQPRSALKFLFSNVTRLHFKVLRFGKPTLD  7919

Range 8: 8547 to 8585 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.1 bits(68) 0.0 13/13(100%) 0/13(0%) Plus/Minus
Query        3  DVSISNGCRLNMR  41
                DVSISNGCRLNMR
Subject   8547  DVSISNGCRLNMR  8585

Range 9: 8096 to 8509 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
295.7 bits(639) 0.0 130/138(94%) 0/138(0%) Minus/Plus
Query       79  A*LRFSPASLLRA*SV*NM*WMKGGSSTTGWTLRSWRLH*GTIWGTSGNTTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*ER*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD  492
                A*LRF  A LLRA*S *N *  KGGSSTTGWTLRSWRLH*GTIWGTSG+TTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*ER*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD
Subject   8096  A*LRFFLAFLLRA*SA*NT**TKGGSSTTGWTLRSWRLH*GTIWGTSGSTTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*ER*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD  8509

Range 10: 7694 to 7930 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
137.2 bits(293) 0.0 70/79(89%) 0/79(0%) Minus/Plus
Query      658  GLV*VYRSATH*SATW*RLRTGISTPIAVVTWVVMTLWRMNXXXXXXXXSLTKLV*QR*RKAICPATRCCYQIGWTKGH  894
                GL *VY+SAT *S T  RL+ GISTPIAVVTWVV TLWRMN*RRFSSRRSLTKLV*QR*RKAICPATRCCYQIGWTKGH
Subject   7694  GLA*VYQSATP*SVTSSRLKIGISTPIAVVTWVVTTLWRMN*RRFSSRRSLTKLV*QR*RKAICPATRCCYQIGWTKGH  7930

Range 11: 8009 to 8053 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
42.8 bits(87) 0.0 15/15(100%) 0/15(0%) Minus/Plus
Query      535  W*KQT*NPSWTIRHC  579
                W*KQT*NPSWTIRHC
Subject   8009  W*KQT*NPSWTIRHC  8053

Range 12: 8540 to 8587 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.0 bits(70) 0.0 16/16(100%) 0/16(0%) Minus/Plus
Query        1  MIASYLVGSR*ILIRR  48
                MIASYLVGSR*ILIRR
Subject   8540  MIASYLVGSR*ILIRR  8587

Nucleotide Sequence (354 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
36
72
108
144
180
216
252
288
324
354

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
258.6 1309.4 25% 2.337e-67 99% EU259806.1
258.6 1309.4 25% 2.337e-67 99% KX756668.1
258.6 1309.4 25% 2.337e-67 99% KX701860.1
257.2 1307.1 25% 6.061e-67 98% KJ174518.1
251.7 1298.9 25% 2.74e-65 98% GQ352632.1

Alignments

Grapevine leafroll associated virus 3 isolate GP18, complete genome

Sequence ID: EU259806.1 Length: 18498 Number of Matches: 8

Range 1: 8911 to 9225 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
258.6 bits(558) 0.0 104/105(99%) 0/105(0%) Minus/Minus
Query       40  WVFNTHFKKECHRY*PHGWHA*EKTTNWKTEISTTTLRY*PHEEPRHRNTIAWLTR*TPLYRKGITRSFPP*YSRLQGQQGKRLRPLNRAHVKIHAIVVI*PTEL  354
                WVFNTHFKKECHRY*PHGWHA*EK TNWKTEISTTTLRY*PHEEPRHRNTIAWLTR*TPLYRKGITRSFPP*YSRLQGQQGKRLRPLNRAHVKIHAIVVI*PTEL
Subject   8911  WVFNTHFKKECHRY*PHGWHA*EKMTNWKTEISTTTLRY*PHEEPRHRNTIAWLTR*TPLYRKGITRSFPP*YSRLQGQQGKRLRPLNRAHVKIHAIVVI*PTEL  9225

Range 2: 8911 to 9225 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
242.1 bits(522) 0.0 104/105(99%) 0/105(0%) Plus/Plus
Query       40  QFCRLYYHNSVNLDVRPIQRTESLSLLALKARILRWKASRYAFSIKRGLSR*PRYSVSVPRFFVRLIPKGRRTYLSLPVCRLLLGVPSVRLIPVALLLEVGIKDP  354
                QFCRLYYHNSVNLDVRPIQRTESLSLLALKARILRWKASRYAFSIKRGLSR*PRYSVSVPRFFVRLIPKGRRTYLSLPVC LLLGVPSVRLIPVALLLEVGIKDP
Subject   8911  QFCRLYYHNSVNLDVRPIQRTESLSLLALKARILRWKASRYAFSIKRGLSR*PRYSVSVPRFFVRLIPKGRRTYLSLPVCHLLLGVPSVRLIPVALLLEVGIKDP  9225

Range 3: 8924 to 9223 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
200.8 bits(432) 0.0 99/100(99%) 0/100(0%) Plus/Plus
Query       53  YITTIA*ILTCALFRGRSRFPCWP*RREY*GGKLLVMPFR*RGVYRVSHAIVFLCLGSS*G*YRRXXXXXXXXXXXXXS*ACHP*G*YRWHSFLKWVLKT  352
                YITTIA*ILTCALFRGRSRFPCWP*RREY*GGKLLVMPFR*RGVYRVSHAIVFLCLGSS*G*YRRVVVLISVFQFV+FS*ACHP*G*YRWHSFLKWVLKT
Subject   8924  YITTIA*ILTCALFRGRSRFPCWP*RREY*GGKLLVMPFR*RGVYRVSHAIVFLCLGSS*G*YRRVVVLISVFQFVIFS*ACHP*G*YRWHSFLKWVLKT  9223

Range 4: 8912 to 9118 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
162.8 bits(349) 0.0 69/69(100%) 0/69(0%) Minus/Minus
Query       41  PSVLTSRRTEAQKHYSVANAINPSLSKRHNEKLSTLIFSPSRPARKATPSSE*GARQDSRYCGNITYRT  247
                PSVLTSRRTEAQKHYSVANAINPSLSKRHNEKLSTLIFSPSRPARKATPSSE*GARQDSRYCGNITYRT
Subject   8912  PSVLTSRRTEAQKHYSVANAINPSLSKRHNEKLSTLIFSPSRPARKATPSSE*GARQDSRYCGNITYRT  9118

Range 5: 9159 to 9224 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.8 bits(111) 0.0 22/22(100%) 0/22(0%) Minus/Minus
Query      288  GSLIPTSRRSATGINLTDGTPK  353
                GSLIPTSRRSATGINLTDGTPK
Subject   9159  GSLIPTSRRSATGINLTDGTPK  9224

Range 6: 8925 to 9224 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
189.4 bits(407) 0.0 100/100(100%) 0/100(0%) Plus/Plus
Query       54  ILPQ*RES*RAPYSEDGVAFLAGLEGENIKVESFSLCLFDKEGFIALATL*CFCASVLREVNTEGXXXXXXXXXXXXXXRRAIREVNTGGTPS*SGY*RP  353
                ILPQ*RES*RAPYSEDGVAFLAGLEGENIKVESFSLCLFDKEGFIALATL*CFCASVLREVNTEGSSYLSQSSSLSSSLRRAIREVNTGGTPS*SGY*RP
Subject   8925  ILPQ*RES*RAPYSEDGVAFLAGLEGENIKVESFSLCLFDKEGFIALATL*CFCASVLREVNTEGSSYLSQSSSLSSSLRRAIREVNTGGTPS*SGY*RP  9224

Range 7: 8913 to 9119 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
155.9 bits(334) 0.0 69/69(100%) 0/69(0%) Minus/Minus
Query       42  PFGINLTKNRGTETL*RG*RDKPLFIEKA*REAFHLNILAFKASKESDSVL*IGRTSRFTLLW*YNLQN  248
                PFGINLTKNRGTETL*RG*RDKPLFIEKA*REAFHLNILAFKASKESDSVL*IGRTSRFTLLW*YNLQN
Subject   8913  PFGINLTKNRGTETL*RG*RDKPLFIEKA*REAFHLNILAFKASKESDSVL*IGRTSRFTLLW*YNLQN  9119

Range 8: 9167 to 9223 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.0 bits(94) 0.0 19/19(100%) 0/19(0%) Minus/Minus
Query      296  GL*YPLQEGVPPVLTSRMA  352
                GL*YPLQEGVPPVLTSRMA
Subject   9167  GL*YPLQEGVPPVLTSRMA  9223

Grapevine leafroll associated virus 3 isolate TC BR, complete genome

Sequence ID: KX756668.1 Length: 18498 Number of Matches: 8

Range 1: 8911 to 9225 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
258.6 bits(558) 0.0 104/105(99%) 0/105(0%) Minus/Minus
Query       40  WVFNTHFKKECHRY*PHGWHA*EKTTNWKTEISTTTLRY*PHEEPRHRNTIAWLTR*TPLYRKGITRSFPP*YSRLQGQQGKRLRPLNRAHVKIHAIVVI*PTEL  354
                WVFNTHFKKECHRY*PHGWHA*EK TNWKTEISTTTLRY*PHEEPRHRNTIAWLTR*TPLYRKGITRSFPP*YSRLQGQQGKRLRPLNRAHVKIHAIVVI*PTEL
Subject   8911  WVFNTHFKKECHRY*PHGWHA*EKMTNWKTEISTTTLRY*PHEEPRHRNTIAWLTR*TPLYRKGITRSFPP*YSRLQGQQGKRLRPLNRAHVKIHAIVVI*PTEL  9225

Range 2: 8911 to 9225 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
242.1 bits(522) 0.0 104/105(99%) 0/105(0%) Plus/Plus
Query       40  QFCRLYYHNSVNLDVRPIQRTESLSLLALKARILRWKASRYAFSIKRGLSR*PRYSVSVPRFFVRLIPKGRRTYLSLPVCRLLLGVPSVRLIPVALLLEVGIKDP  354
                QFCRLYYHNSVNLDVRPIQRTESLSLLALKARILRWKASRYAFSIKRGLSR*PRYSVSVPRFFVRLIPKGRRTYLSLPVC LLLGVPSVRLIPVALLLEVGIKDP
Subject   8911  QFCRLYYHNSVNLDVRPIQRTESLSLLALKARILRWKASRYAFSIKRGLSR*PRYSVSVPRFFVRLIPKGRRTYLSLPVCHLLLGVPSVRLIPVALLLEVGIKDP  9225

Range 3: 8924 to 9223 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
200.8 bits(432) 0.0 99/100(99%) 0/100(0%) Plus/Plus
Query       53  YITTIA*ILTCALFRGRSRFPCWP*RREY*GGKLLVMPFR*RGVYRVSHAIVFLCLGSS*G*YRRXXXXXXXXXXXXXS*ACHP*G*YRWHSFLKWVLKT  352
                YITTIA*ILTCALFRGRSRFPCWP*RREY*GGKLLVMPFR*RGVYRVSHAIVFLCLGSS*G*YRRVVVLISVFQFV+FS*ACHP*G*YRWHSFLKWVLKT
Subject   8924  YITTIA*ILTCALFRGRSRFPCWP*RREY*GGKLLVMPFR*RGVYRVSHAIVFLCLGSS*G*YRRVVVLISVFQFVIFS*ACHP*G*YRWHSFLKWVLKT  9223

Range 4: 8912 to 9118 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
162.8 bits(349) 0.0 69/69(100%) 0/69(0%) Minus/Minus
Query       41  PSVLTSRRTEAQKHYSVANAINPSLSKRHNEKLSTLIFSPSRPARKATPSSE*GARQDSRYCGNITYRT  247
                PSVLTSRRTEAQKHYSVANAINPSLSKRHNEKLSTLIFSPSRPARKATPSSE*GARQDSRYCGNITYRT
Subject   8912  PSVLTSRRTEAQKHYSVANAINPSLSKRHNEKLSTLIFSPSRPARKATPSSE*GARQDSRYCGNITYRT  9118

Range 5: 9159 to 9224 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.8 bits(111) 0.0 22/22(100%) 0/22(0%) Minus/Minus
Query      288  GSLIPTSRRSATGINLTDGTPK  353
                GSLIPTSRRSATGINLTDGTPK
Subject   9159  GSLIPTSRRSATGINLTDGTPK  9224

Range 6: 8925 to 9224 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
189.4 bits(407) 0.0 100/100(100%) 0/100(0%) Plus/Plus
Query       54  ILPQ*RES*RAPYSEDGVAFLAGLEGENIKVESFSLCLFDKEGFIALATL*CFCASVLREVNTEGXXXXXXXXXXXXXXRRAIREVNTGGTPS*SGY*RP  353
                ILPQ*RES*RAPYSEDGVAFLAGLEGENIKVESFSLCLFDKEGFIALATL*CFCASVLREVNTEGSSYLSQSSSLSSSLRRAIREVNTGGTPS*SGY*RP
Subject   8925  ILPQ*RES*RAPYSEDGVAFLAGLEGENIKVESFSLCLFDKEGFIALATL*CFCASVLREVNTEGSSYLSQSSSLSSSLRRAIREVNTGGTPS*SGY*RP  9224

Range 7: 8913 to 9119 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
155.9 bits(334) 0.0 69/69(100%) 0/69(0%) Minus/Minus
Query       42  PFGINLTKNRGTETL*RG*RDKPLFIEKA*REAFHLNILAFKASKESDSVL*IGRTSRFTLLW*YNLQN  248
                PFGINLTKNRGTETL*RG*RDKPLFIEKA*REAFHLNILAFKASKESDSVL*IGRTSRFTLLW*YNLQN
Subject   8913  PFGINLTKNRGTETL*RG*RDKPLFIEKA*REAFHLNILAFKASKESDSVL*IGRTSRFTLLW*YNLQN  9119

Range 8: 9167 to 9223 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.0 bits(94) 0.0 19/19(100%) 0/19(0%) Minus/Minus
Query      296  GL*YPLQEGVPPVLTSRMA  352
                GL*YPLQEGVPPVLTSRMA
Subject   9167  GL*YPLQEGVPPVLTSRMA  9223

Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome

Sequence ID: KX701860.1 Length: 18020 Number of Matches: 8

Range 1: 8429 to 8743 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
258.6 bits(558) 0.0 104/105(99%) 0/105(0%) Minus/Minus
Query       40  WVFNTHFKKECHRY*PHGWHA*EKTTNWKTEISTTTLRY*PHEEPRHRNTIAWLTR*TPLYRKGITRSFPP*YSRLQGQQGKRLRPLNRAHVKIHAIVVI*PTEL  354
                WVFNTHFKKECHRY*PHGWHA*EK TNWKTEISTTTLRY*PHEEPRHRNTIAWLTR*TPLYRKGITRSFPP*YSRLQGQQGKRLRPLNRAHVKIHAIVVI*PTEL
Subject   8429  WVFNTHFKKECHRY*PHGWHA*EKMTNWKTEISTTTLRY*PHEEPRHRNTIAWLTR*TPLYRKGITRSFPP*YSRLQGQQGKRLRPLNRAHVKIHAIVVI*PTEL  8743

Range 2: 8429 to 8743 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
242.1 bits(522) 0.0 104/105(99%) 0/105(0%) Plus/Plus
Query       40  QFCRLYYHNSVNLDVRPIQRTESLSLLALKARILRWKASRYAFSIKRGLSR*PRYSVSVPRFFVRLIPKGRRTYLSLPVCRLLLGVPSVRLIPVALLLEVGIKDP  354
                QFCRLYYHNSVNLDVRPIQRTESLSLLALKARILRWKASRYAFSIKRGLSR*PRYSVSVPRFFVRLIPKGRRTYLSLPVC LLLGVPSVRLIPVALLLEVGIKDP
Subject   8429  QFCRLYYHNSVNLDVRPIQRTESLSLLALKARILRWKASRYAFSIKRGLSR*PRYSVSVPRFFVRLIPKGRRTYLSLPVCHLLLGVPSVRLIPVALLLEVGIKDP  8743

Range 3: 8442 to 8741 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
200.8 bits(432) 0.0 99/100(99%) 0/100(0%) Plus/Plus
Query       53  YITTIA*ILTCALFRGRSRFPCWP*RREY*GGKLLVMPFR*RGVYRVSHAIVFLCLGSS*G*YRRXXXXXXXXXXXXXS*ACHP*G*YRWHSFLKWVLKT  352
                YITTIA*ILTCALFRGRSRFPCWP*RREY*GGKLLVMPFR*RGVYRVSHAIVFLCLGSS*G*YRRVVVLISVFQFV+FS*ACHP*G*YRWHSFLKWVLKT
Subject   8442  YITTIA*ILTCALFRGRSRFPCWP*RREY*GGKLLVMPFR*RGVYRVSHAIVFLCLGSS*G*YRRVVVLISVFQFVIFS*ACHP*G*YRWHSFLKWVLKT  8741

Range 4: 8430 to 8636 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
162.8 bits(349) 0.0 69/69(100%) 0/69(0%) Minus/Minus
Query       41  PSVLTSRRTEAQKHYSVANAINPSLSKRHNEKLSTLIFSPSRPARKATPSSE*GARQDSRYCGNITYRT  247
                PSVLTSRRTEAQKHYSVANAINPSLSKRHNEKLSTLIFSPSRPARKATPSSE*GARQDSRYCGNITYRT
Subject   8430  PSVLTSRRTEAQKHYSVANAINPSLSKRHNEKLSTLIFSPSRPARKATPSSE*GARQDSRYCGNITYRT  8636

Range 5: 8677 to 8742 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.8 bits(111) 0.0 22/22(100%) 0/22(0%) Minus/Minus
Query      288  GSLIPTSRRSATGINLTDGTPK  353
                GSLIPTSRRSATGINLTDGTPK
Subject   8677  GSLIPTSRRSATGINLTDGTPK  8742

Range 6: 8443 to 8742 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
189.4 bits(407) 0.0 100/100(100%) 0/100(0%) Plus/Plus
Query       54  ILPQ*RES*RAPYSEDGVAFLAGLEGENIKVESFSLCLFDKEGFIALATL*CFCASVLREVNTEGXXXXXXXXXXXXXXRRAIREVNTGGTPS*SGY*RP  353
                ILPQ*RES*RAPYSEDGVAFLAGLEGENIKVESFSLCLFDKEGFIALATL*CFCASVLREVNTEGSSYLSQSSSLSSSLRRAIREVNTGGTPS*SGY*RP
Subject   8443  ILPQ*RES*RAPYSEDGVAFLAGLEGENIKVESFSLCLFDKEGFIALATL*CFCASVLREVNTEGSSYLSQSSSLSSSLRRAIREVNTGGTPS*SGY*RP  8742

Range 7: 8431 to 8637 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
155.9 bits(334) 0.0 69/69(100%) 0/69(0%) Minus/Minus
Query       42  PFGINLTKNRGTETL*RG*RDKPLFIEKA*REAFHLNILAFKASKESDSVL*IGRTSRFTLLW*YNLQN  248
                PFGINLTKNRGTETL*RG*RDKPLFIEKA*REAFHLNILAFKASKESDSVL*IGRTSRFTLLW*YNLQN
Subject   8431  PFGINLTKNRGTETL*RG*RDKPLFIEKA*REAFHLNILAFKASKESDSVL*IGRTSRFTLLW*YNLQN  8637

Range 8: 8685 to 8741 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.0 bits(94) 0.0 19/19(100%) 0/19(0%) Minus/Minus
Query      296  GL*YPLQEGVPPVLTSRMA  352
                GL*YPLQEGVPPVLTSRMA
Subject   8685  GL*YPLQEGVPPVLTSRMA  8741

Grapevine leafroll associated virus 3, complete genome

Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 8

Range 1: 8911 to 9225 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
257.2 bits(555) 0.0 103/105(98%) 0/105(0%) Minus/Minus
Query       40  WVFNTHFKKECHRY*PHGWHA*EKTTNWKTEISTTTLRY*PHEEPRHRNTIAWLTR*TPLYRKGITRSFPP*YSRLQGQQGKRLRPLNRAHVKIHAIVVI*PTEL  354
                WVFNTHFKKECHRY*PHGWHA*+K TNWKTEISTTTLRY*PHEEPRHRNTIAWLTR*TPLYRKGITRSFPP*YSRLQGQQGKRLRPLNRAHVKIHAIVVI*PTEL
Subject   8911  WVFNTHFKKECHRY*PHGWHA*DKMTNWKTEISTTTLRY*PHEEPRHRNTIAWLTR*TPLYRKGITRSFPP*YSRLQGQQGKRLRPLNRAHVKIHAIVVI*PTEL  9225

Range 2: 8911 to 9225 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
241.2 bits(520) 0.0 103/105(98%) 0/105(0%) Plus/Plus
Query       40  QFCRLYYHNSVNLDVRPIQRTESLSLLALKARILRWKASRYAFSIKRGLSR*PRYSVSVPRFFVRLIPKGRRTYLSLPVCRLLLGVPSVRLIPVALLLEVGIKDP  354
                QFCRLYYHNSVNLDVRPIQRTESLSLLALKARILRWKASRYAFSIKRGLSR*PRYSVSVPRFFVRLIPKGRRTYLSLPVC L+LGVPSVRLIPVALLLEVGIKDP
Subject   8911  QFCRLYYHNSVNLDVRPIQRTESLSLLALKARILRWKASRYAFSIKRGLSR*PRYSVSVPRFFVRLIPKGRRTYLSLPVCHLILGVPSVRLIPVALLLEVGIKDP  9225

Range 3: 8924 to 9223 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
200.8 bits(432) 0.0 98/100(98%) 0/100(0%) Plus/Plus
Query       53  YITTIA*ILTCALFRGRSRFPCWP*RREY*GGKLLVMPFR*RGVYRVSHAIVFLCLGSS*G*YRRXXXXXXXXXXXXXS*ACHP*G*YRWHSFLKWVLKT  352
                YITTIA*ILTCALFRGRSRFPCWP*RREY*GGKLLVMPFR*RGVYRVSHAIVFLCLGSS*G*YRRVVVLISVFQFV+ S*ACHP*G*YRWHSFLKWVLKT
Subject   8924  YITTIA*ILTCALFRGRSRFPCWP*RREY*GGKLLVMPFR*RGVYRVSHAIVFLCLGSS*G*YRRVVVLISVFQFVILS*ACHP*G*YRWHSFLKWVLKT  9223

Range 4: 8912 to 9118 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
162.8 bits(349) 0.0 69/69(100%) 0/69(0%) Minus/Minus
Query       41  PSVLTSRRTEAQKHYSVANAINPSLSKRHNEKLSTLIFSPSRPARKATPSSE*GARQDSRYCGNITYRT  247
                PSVLTSRRTEAQKHYSVANAINPSLSKRHNEKLSTLIFSPSRPARKATPSSE*GARQDSRYCGNITYRT
Subject   8912  PSVLTSRRTEAQKHYSVANAINPSLSKRHNEKLSTLIFSPSRPARKATPSSE*GARQDSRYCGNITYRT  9118

Range 5: 9159 to 9224 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.8 bits(111) 0.0 22/22(100%) 0/22(0%) Minus/Minus
Query      288  GSLIPTSRRSATGINLTDGTPK  353
                GSLIPTSRRSATGINLTDGTPK
Subject   9159  GSLIPTSRRSATGINLTDGTPK  9224

Range 6: 8925 to 9224 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
189.4 bits(407) 0.0 99/100(99%) 0/100(0%) Plus/Plus
Query       54  ILPQ*RES*RAPYSEDGVAFLAGLEGENIKVESFSLCLFDKEGFIALATL*CFCASVLREVNTEGXXXXXXXXXXXXXXRRAIREVNTGGTPS*SGY*RP  353
                ILPQ*RES*RAPYSEDGVAFLAGLEGENIKVESFSLCLFDKEGFIALATL*CFCASVLREVNTEGSSYLSQSSSLSS LRRAIREVNTGGTPS*SGY*RP
Subject   8925  ILPQ*RES*RAPYSEDGVAFLAGLEGENIKVESFSLCLFDKEGFIALATL*CFCASVLREVNTEGSSYLSQSSSLSSYLRRAIREVNTGGTPS*SGY*RP  9224

Range 7: 8913 to 9119 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
155.9 bits(334) 0.0 69/69(100%) 0/69(0%) Minus/Minus
Query       42  PFGINLTKNRGTETL*RG*RDKPLFIEKA*REAFHLNILAFKASKESDSVL*IGRTSRFTLLW*YNLQN  248
                PFGINLTKNRGTETL*RG*RDKPLFIEKA*REAFHLNILAFKASKESDSVL*IGRTSRFTLLW*YNLQN
Subject   8913  PFGINLTKNRGTETL*RG*RDKPLFIEKA*REAFHLNILAFKASKESDSVL*IGRTSRFTLLW*YNLQN  9119

Range 8: 9167 to 9223 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.0 bits(94) 0.0 19/19(100%) 0/19(0%) Minus/Minus
Query      296  GL*YPLQEGVPPVLTSRMA  352
                GL*YPLQEGVPPVLTSRMA
Subject   9167  GL*YPLQEGVPPVLTSRMA  9223

Grapevine leafroll associated virus 3 isolate 623, complete genome

Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 8

Range 1: 8911 to 9225 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
251.7 bits(543) 0.0 103/105(98%) 0/105(0%) Minus/Minus
Query       40  WVFNTHFKKECHRY*PHGWHA*EKTTNWKTEISTTTLRY*PHEEPRHRNTIAWLTR*TPLYRKGITRSFPP*YSRLQGQQGKRLRPLNRAHVKIHAIVVI*PTEL  354
                WVFNTHFKKECHRY*PHGWHA*EK TN KTEISTTTLRY*PHEEPRHRNTIAWLTR*TPLYRKGITRSFPP*YSRLQGQQGKRLRPLNRAHVKIHAIVVI*PTEL
Subject   8911  WVFNTHFKKECHRY*PHGWHA*EKMTN*KTEISTTTLRY*PHEEPRHRNTIAWLTR*TPLYRKGITRSFPP*YSRLQGQQGKRLRPLNRAHVKIHAIVVI*PTEL  9225

Range 2: 8911 to 9225 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
238.4 bits(514) 0.0 103/105(98%) 0/105(0%) Plus/Plus
Query       40  QFCRLYYHNSVNLDVRPIQRTESLSLLALKARILRWKASRYAFSIKRGLSR*PRYSVSVPRFFVRLIPKGRRTYLSLPVCRLLLGVPSVRLIPVALLLEVGIKDP  354
                QFCRLYYHNSVNLDVRPIQRTESLSLLALKARILRWKASRYAFSIKRGLSR*PRYSVSVPRFFVRLIPKGRRTYLSL VC LLLGVPSVRLIPVALLLEVGIKDP
Subject   8911  QFCRLYYHNSVNLDVRPIQRTESLSLLALKARILRWKASRYAFSIKRGLSR*PRYSVSVPRFFVRLIPKGRRTYLSLSVCHLLLGVPSVRLIPVALLLEVGIKDP  9225

Range 3: 8924 to 9223 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
200.8 bits(432) 0.0 99/100(99%) 0/100(0%) Plus/Plus
Query       53  YITTIA*ILTCALFRGRSRFPCWP*RREY*GGKLLVMPFR*RGVYRVSHAIVFLCLGSS*G*YRRXXXXXXXXXXXXXS*ACHP*G*YRWHSFLKWVLKT  352
                YITTIA*ILTCALFRGRSRFPCWP*RREY*GGKLLVMPFR*RGVYRVSHAIVFLCLGSS*G*YRRVVVLISVFQFV+FS*ACHP*G*YRWHSFLKWVLKT
Subject   8924  YITTIA*ILTCALFRGRSRFPCWP*RREY*GGKLLVMPFR*RGVYRVSHAIVFLCLGSS*G*YRRVVVLISVFQFVIFS*ACHP*G*YRWHSFLKWVLKT  9223

Range 4: 8912 to 9118 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
162.8 bits(349) 0.0 69/69(100%) 0/69(0%) Minus/Minus
Query       41  PSVLTSRRTEAQKHYSVANAINPSLSKRHNEKLSTLIFSPSRPARKATPSSE*GARQDSRYCGNITYRT  247
                PSVLTSRRTEAQKHYSVANAINPSLSKRHNEKLSTLIFSPSRPARKATPSSE*GARQDSRYCGNITYRT
Subject   8912  PSVLTSRRTEAQKHYSVANAINPSLSKRHNEKLSTLIFSPSRPARKATPSSE*GARQDSRYCGNITYRT  9118

Range 5: 9159 to 9224 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.8 bits(111) 0.0 22/22(100%) 0/22(0%) Minus/Minus
Query      288  GSLIPTSRRSATGINLTDGTPK  353
                GSLIPTSRRSATGINLTDGTPK
Subject   9159  GSLIPTSRRSATGINLTDGTPK  9224

Range 6: 8925 to 9224 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
189.4 bits(407) 0.0 99/100(99%) 0/100(0%) Plus/Plus
Query       54  ILPQ*RES*RAPYSEDGVAFLAGLEGENIKVESFSLCLFDKEGFIALATL*CFCASVLREVNTEGXXXXXXXXXXXXXXRRAIREVNTGGTPS*SGY*RP  353
                ILPQ*RES*RAPYSEDGVAFLAGLEGENIKVESFSLCLFDKEGFIALATL*CFCASVLREVNTEGSSYLSQS SLSSSLRRAIREVNTGGTPS*SGY*RP
Subject   8925  ILPQ*RES*RAPYSEDGVAFLAGLEGENIKVESFSLCLFDKEGFIALATL*CFCASVLREVNTEGSSYLSQSFSLSSSLRRAIREVNTGGTPS*SGY*RP  9224

Range 7: 8913 to 9119 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
155.9 bits(334) 0.0 69/69(100%) 0/69(0%) Minus/Minus
Query       42  PFGINLTKNRGTETL*RG*RDKPLFIEKA*REAFHLNILAFKASKESDSVL*IGRTSRFTLLW*YNLQN  248
                PFGINLTKNRGTETL*RG*RDKPLFIEKA*REAFHLNILAFKASKESDSVL*IGRTSRFTLLW*YNLQN
Subject   8913  PFGINLTKNRGTETL*RG*RDKPLFIEKA*REAFHLNILAFKASKESDSVL*IGRTSRFTLLW*YNLQN  9119

Range 8: 9167 to 9223 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.0 bits(94) 0.0 19/19(100%) 0/19(0%) Minus/Minus
Query      296  GL*YPLQEGVPPVLTSRMA  352
                GL*YPLQEGVPPVLTSRMA
Subject   9167  GL*YPLQEGVPPVLTSRMA  9223

Nucleotide Sequence (164 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
17
34
51
68
85
102
119
136
153
164

Descriptions

Alignments

Grapevine leafroll associated virus 3 isolate 6 6 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130295.1 Length: 4711 Number of Matches: 7

Range 1: 3535 to 3696 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
132.1 bits(282) 0.0 52/54(96%) 0/54(0%) Minus/Minus
Query        2  AERICTIINDRSMML*PRDEICKCCSTFPPPCLPTQTSFKESTRPNPRFSPDKI  163
                AERICTIINDRSMML*PRDEI KCCSTFPPPCLPTQTSFKEST PNPRFSPDKI
Subject   3535  AERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI  3696

Range 2: 3534 to 3695 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.4 bits(274) 0.0 53/54(98%) 0/54(0%) Plus/Plus
Query        1  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTYKSHLWVKASWTYRLLLCRSFP  162
                IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY SHLWVKASWTYRLLLCRSFP
Subject   3534  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFP  3695

Range 3: 3534 to 3695 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
119.7 bits(255) 0.0 52/54(96%) 0/54(0%) Minus/Minus
Query        1  RKGSAQ**TIGP*CFNPEMRFVSAVVRFHLLVYLRKLASRNLRAPILDSPQTKY  162
                RKGSAQ**TIGP*CFNPEMR VSAVVRFHLLVYLRKLASRNLR PILDSPQTKY
Subject   3534  RKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY  3695

Range 4: 3536 to 3697 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
114.2 bits(243) 0.0 52/54(96%) 0/54(0%) Plus/Plus
Query        3  ILSGENRGLGRVDSLKLVCVGRQGGGNVLQHLQISSLG*SIMDLSFIIVQILSA  164
                ILSGENRGLG VDSLKLVCVGRQGGGNVLQHL ISSLG*SIMDLSFIIVQILSA
Subject   3536  ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSA  3697

Range 5: 3535 to 3696 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.4 bits(215) 0.0 53/54(98%) 0/54(0%) Plus/Plus
Query        2  YFVWGESRIGARRFLEASLXXXXXXXXXXXALTNLISGLKHHGPIVYYCADPFR  163
                YFVWGESRIG RRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFR
Subject   3535  YFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFR  3696

Range 6: 3635 to 3697 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.5 bits(106) 0.0 21/21(100%) 0/21(0%) Minus/Minus
Query      102  GGKDLHNNKR*VHDALTQR*D  164
                GGKDLHNNKR*VHDALTQR*D
Subject   3635  GGKDLHNNKR*VHDALTQR*D  3697

Range 7: 3536 to 3592 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.1 bits(92) 0.0 19/19(100%) 0/19(0%) Minus/Minus
Query        3  AN*LQGIYAPQSSILPRQN  59
                AN*LQGIYAPQSSILPRQN
Subject   3536  AN*LQGIYAPQSSILPRQN  3592

Grapevine leafroll associated virus 3 isolate 6 11 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130297.1 Length: 4711 Number of Matches: 7

Range 1: 3535 to 3696 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
132.1 bits(282) 0.0 52/54(96%) 0/54(0%) Minus/Minus
Query        2  AERICTIINDRSMML*PRDEICKCCSTFPPPCLPTQTSFKESTRPNPRFSPDKI  163
                AERICTIINDRSMML*PRDEI KCCSTFPPPCLPTQTSFKEST PNPRFSPDKI
Subject   3535  AERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI  3696

Range 2: 3534 to 3695 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.4 bits(274) 0.0 53/54(98%) 0/54(0%) Plus/Plus
Query        1  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTYKSHLWVKASWTYRLLLCRSFP  162
                IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY SHLWVKASWTYRLLLCRSFP
Subject   3534  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFP  3695

Range 3: 3534 to 3695 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
119.7 bits(255) 0.0 52/54(96%) 0/54(0%) Minus/Minus
Query        1  RKGSAQ**TIGP*CFNPEMRFVSAVVRFHLLVYLRKLASRNLRAPILDSPQTKY  162
                RKGSAQ**TIGP*CFNPEMR VSAVVRFHLLVYLRKLASRNLR PILDSPQTKY
Subject   3534  RKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY  3695

Range 4: 3536 to 3697 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
114.2 bits(243) 0.0 52/54(96%) 0/54(0%) Plus/Plus
Query        3  ILSGENRGLGRVDSLKLVCVGRQGGGNVLQHLQISSLG*SIMDLSFIIVQILSA  164
                ILSGENRGLG VDSLKLVCVGRQGGGNVLQHL ISSLG*SIMDLSFIIVQILSA
Subject   3536  ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSA  3697

Range 5: 3535 to 3696 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.4 bits(215) 0.0 53/54(98%) 0/54(0%) Plus/Plus
Query        2  YFVWGESRIGARRFLEASLXXXXXXXXXXXALTNLISGLKHHGPIVYYCADPFR  163
                YFVWGESRIG RRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFR
Subject   3535  YFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFR  3696

Range 6: 3635 to 3697 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.5 bits(106) 0.0 21/21(100%) 0/21(0%) Minus/Minus
Query      102  GGKDLHNNKR*VHDALTQR*D  164
                GGKDLHNNKR*VHDALTQR*D
Subject   3635  GGKDLHNNKR*VHDALTQR*D  3697

Range 7: 3536 to 3592 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.1 bits(92) 0.0 19/19(100%) 0/19(0%) Minus/Minus
Query        3  AN*LQGIYAPQSSILPRQN  59
                AN*LQGIYAPQSSILPRQN
Subject   3536  AN*LQGIYAPQSSILPRQN  3592

Grapevine leafroll associated virus 3 isolate 6 18 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130300.1 Length: 4711 Number of Matches: 7

Range 1: 3535 to 3696 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
132.1 bits(282) 0.0 52/54(96%) 0/54(0%) Minus/Minus
Query        2  AERICTIINDRSMML*PRDEICKCCSTFPPPCLPTQTSFKESTRPNPRFSPDKI  163
                AERICTIINDRSMML*PRDEI KCCSTFPPPCLPTQTSFKEST PNPRFSPDKI
Subject   3535  AERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI  3696

Range 2: 3534 to 3695 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.4 bits(274) 0.0 53/54(98%) 0/54(0%) Plus/Plus
Query        1  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTYKSHLWVKASWTYRLLLCRSFP  162
                IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY SHLWVKASWTYRLLLCRSFP
Subject   3534  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFP  3695

Range 3: 3534 to 3695 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
119.7 bits(255) 0.0 52/54(96%) 0/54(0%) Minus/Minus
Query        1  RKGSAQ**TIGP*CFNPEMRFVSAVVRFHLLVYLRKLASRNLRAPILDSPQTKY  162
                RKGSAQ**TIGP*CFNPEMR VSAVVRFHLLVYLRKLASRNLR PILDSPQTKY
Subject   3534  RKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY  3695

Range 4: 3536 to 3697 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
114.2 bits(243) 0.0 52/54(96%) 0/54(0%) Plus/Plus
Query        3  ILSGENRGLGRVDSLKLVCVGRQGGGNVLQHLQISSLG*SIMDLSFIIVQILSA  164
                ILSGENRGLG VDSLKLVCVGRQGGGNVLQHL ISSLG*SIMDLSFIIVQILSA
Subject   3536  ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSA  3697

Range 5: 3535 to 3696 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.4 bits(215) 0.0 53/54(98%) 0/54(0%) Plus/Plus
Query        2  YFVWGESRIGARRFLEASLXXXXXXXXXXXALTNLISGLKHHGPIVYYCADPFR  163
                YFVWGESRIG RRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFR
Subject   3535  YFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFR  3696

Range 6: 3635 to 3697 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.5 bits(106) 0.0 21/21(100%) 0/21(0%) Minus/Minus
Query      102  GGKDLHNNKR*VHDALTQR*D  164
                GGKDLHNNKR*VHDALTQR*D
Subject   3635  GGKDLHNNKR*VHDALTQR*D  3697

Range 7: 3536 to 3592 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.1 bits(92) 0.0 19/19(100%) 0/19(0%) Minus/Minus
Query        3  AN*LQGIYAPQSSILPRQN  59
                AN*LQGIYAPQSSILPRQN
Subject   3536  AN*LQGIYAPQSSILPRQN  3592

Grapevine leafroll associated virus 3 isolate 6 102 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130301.1 Length: 4711 Number of Matches: 7

Range 1: 3535 to 3696 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
132.1 bits(282) 0.0 52/54(96%) 0/54(0%) Minus/Minus
Query        2  AERICTIINDRSMML*PRDEICKCCSTFPPPCLPTQTSFKESTRPNPRFSPDKI  163
                AERICTIINDRSMML*PRDEI KCCSTFPPPCLPTQTSFKEST PNPRFSPDKI
Subject   3535  AERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI  3696

Range 2: 3534 to 3695 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.4 bits(274) 0.0 53/54(98%) 0/54(0%) Plus/Plus
Query        1  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTYKSHLWVKASWTYRLLLCRSFP  162
                IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY SHLWVKASWTYRLLLCRSFP
Subject   3534  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFP  3695

Range 3: 3534 to 3695 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
119.7 bits(255) 0.0 52/54(96%) 0/54(0%) Minus/Minus
Query        1  RKGSAQ**TIGP*CFNPEMRFVSAVVRFHLLVYLRKLASRNLRAPILDSPQTKY  162
                RKGSAQ**TIGP*CFNPEMR VSAVVRFHLLVYLRKLASRNLR PILDSPQTKY
Subject   3534  RKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY  3695

Range 4: 3536 to 3697 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
114.2 bits(243) 0.0 52/54(96%) 0/54(0%) Plus/Plus
Query        3  ILSGENRGLGRVDSLKLVCVGRQGGGNVLQHLQISSLG*SIMDLSFIIVQILSA  164
                ILSGENRGLG VDSLKLVCVGRQGGGNVLQHL ISSLG*SIMDLSFIIVQILSA
Subject   3536  ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSA  3697

Range 5: 3535 to 3696 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.4 bits(215) 0.0 53/54(98%) 0/54(0%) Plus/Plus
Query        2  YFVWGESRIGARRFLEASLXXXXXXXXXXXALTNLISGLKHHGPIVYYCADPFR  163
                YFVWGESRIG RRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFR
Subject   3535  YFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFR  3696

Range 6: 3635 to 3697 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.5 bits(106) 0.0 21/21(100%) 0/21(0%) Minus/Minus
Query      102  GGKDLHNNKR*VHDALTQR*D  164
                GGKDLHNNKR*VHDALTQR*D
Subject   3635  GGKDLHNNKR*VHDALTQR*D  3697

Range 7: 3536 to 3592 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.1 bits(92) 0.0 19/19(100%) 0/19(0%) Minus/Minus
Query        3  AN*LQGIYAPQSSILPRQN  59
                AN*LQGIYAPQSSILPRQN
Subject   3536  AN*LQGIYAPQSSILPRQN  3592

Grapevine leafroll associated virus 3 isolate 6 114 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130303.1 Length: 4711 Number of Matches: 7

Range 1: 3535 to 3696 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
132.1 bits(282) 0.0 52/54(96%) 0/54(0%) Minus/Minus
Query        2  AERICTIINDRSMML*PRDEICKCCSTFPPPCLPTQTSFKESTRPNPRFSPDKI  163
                AERICTIINDRSMML*PRDEI KCCSTFPPPCLPTQTSFKEST PNPRFSPDKI
Subject   3535  AERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI  3696

Range 2: 3534 to 3695 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.4 bits(274) 0.0 53/54(98%) 0/54(0%) Plus/Plus
Query        1  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTYKSHLWVKASWTYRLLLCRSFP  162
                IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY SHLWVKASWTYRLLLCRSFP
Subject   3534  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFP  3695

Range 3: 3534 to 3695 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
119.7 bits(255) 0.0 52/54(96%) 0/54(0%) Minus/Minus
Query        1  RKGSAQ**TIGP*CFNPEMRFVSAVVRFHLLVYLRKLASRNLRAPILDSPQTKY  162
                RKGSAQ**TIGP*CFNPEMR VSAVVRFHLLVYLRKLASRNLR PILDSPQTKY
Subject   3534  RKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY  3695

Range 4: 3536 to 3697 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
114.2 bits(243) 0.0 52/54(96%) 0/54(0%) Plus/Plus
Query        3  ILSGENRGLGRVDSLKLVCVGRQGGGNVLQHLQISSLG*SIMDLSFIIVQILSA  164
                ILSGENRGLG VDSLKLVCVGRQGGGNVLQHL ISSLG*SIMDLSFIIVQILSA
Subject   3536  ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSA  3697

Range 5: 3535 to 3696 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.4 bits(215) 0.0 53/54(98%) 0/54(0%) Plus/Plus
Query        2  YFVWGESRIGARRFLEASLXXXXXXXXXXXALTNLISGLKHHGPIVYYCADPFR  163
                YFVWGESRIG RRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFR
Subject   3535  YFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFR  3696

Range 6: 3635 to 3697 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.5 bits(106) 0.0 21/21(100%) 0/21(0%) Minus/Minus
Query      102  GGKDLHNNKR*VHDALTQR*D  164
                GGKDLHNNKR*VHDALTQR*D
Subject   3635  GGKDLHNNKR*VHDALTQR*D  3697

Range 7: 3536 to 3592 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.1 bits(92) 0.0 19/19(100%) 0/19(0%) Minus/Minus
Query        3  AN*LQGIYAPQSSILPRQN  59
                AN*LQGIYAPQSSILPRQN
Subject   3536  AN*LQGIYAPQSSILPRQN  3592

Nucleotide Sequence (566 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
57
114
171
228
285
342
399
456
513
566

Descriptions

Alignments

Grapevine leafroll associated virus 3 isolate 6 15 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130299.1 Length: 4711 Number of Matches: 8

Range 1: 1880 to 2443 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
448.3 bits(972) 0.0 188/188(100%) 0/188(0%) Plus/Minus
Query        2  ISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYGRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRFIDR*H*VWKTYLTLPPSVDQFRYVGR*SHYIQLL*WTYT  565
                ISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYGRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRFIDR*H*VWKTYLTLPPSVDQFRYVGR*SHYIQLL*WTYT
Subject   1880  ISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYGRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRFIDR*H*VWKTYLTLPPSVDQFRYVGR*SHYIQLL*WTYT  2443

Range 2: 1880 to 2443 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
441.9 bits(958) 0.0 188/188(100%) 0/188(0%) Minus/Plus
Query        2  GVGPSEQLDVVALTSDVTELINTRGQGKICFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRY  565
                GVGPSEQLDVVALTSDVTELINTRGQGKICFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRY
Subject   1880  GVGPSEQLDVVALTSDVTELINTRGQGKICFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRY  2443

Range 3: 1879 to 2442 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
441.4 bits(957) 0.0 188/188(100%) 0/188(0%) Minus/Plus
Query        3  RCRSIRAAGCSGFNVRRNGIDQH*GAR*DMFSRLSVIDQ*SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYRKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QI  566
                RCRSIRAAGCSGFNVRRNGIDQH*GAR*DMFSRLSVIDQ*SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYRKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QI
Subject   1879  RCRSIRAAGCSGFNVRRNGIDQH*GAR*DMFSRLSVIDQ*SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYRKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QI  2442

Range 4: 1879 to 2442 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
420.8 bits(912) 0.0 188/188(100%) 0/188(0%) Plus/Minus
Query        3  YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKHILPCPLVLINSVTSDVKATTSSCSDGPTP  566
                YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKHILPCPLVLINSVTSDVKATTSSCSDGPTP
Subject   1879  YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKHILPCPLVLINSVTSDVKATTSSCSDGPTP  2442

Range 5: 1881 to 2444 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
400.6 bits(868) 0.0 188/188(100%) 0/188(0%) Minus/Plus
Query        1  V*VHQSSWM*WL*RPT*RN*STLGGKVRYVFQTQCYRSMKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLP*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GIXXXXXXXXX*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDI  564
                V*VHQSSWM*WL*RPT*RN*STLGGKVRYVFQTQCYRSMKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLP*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDI
Subject   1881  V*VHQSSWM*WL*RPT*RN*STLGGKVRYVFQTQCYRSMKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLP*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDI  2444

Range 6: 1881 to 2129 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.4 bits(418) 0.0 83/83(100%) 0/83(0%) Plus/Minus
Query      316  WPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH*SITLSLENISYLAP*C*SIPLRRTLKPLHPAALMDLH  564
                WPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH*SITLSLENISYLAP*C*SIPLRRTLKPLHPAALMDLH
Subject   1881  WPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH*SITLSLENISYLAP*C*SIPLRRTLKPLHPAALMDLH  2129

Range 7: 2271 to 2381 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
88.6 bits(187) 0.0 37/37(100%) 0/37(0%) Plus/Minus
Query       64  A*LGQYTLAEFSSL*VE*WWCE*NTS*RIAQCWLETH  174
                A*LGQYTLAEFSSL*VE*WWCE*NTS*RIAQCWLETH
Subject   2271  A*LGQYTLAEFSSL*VE*WWCE*NTS*RIAQCWLETH  2381

Range 8: 2184 to 2216 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.9 bits(59) 0.0 11/11(100%) 0/11(0%) Plus/Minus
Query      229  SFDLIRSPPYT  261
                SFDLIRSPPYT
Subject   2184  SFDLIRSPPYT  2216

Grapevine leafroll associated virus 3 isolate 3138 07, complete genome

Sequence ID: JX559645.1 Length: 18498 Number of Matches: 8

Range 1: 15611 to 16174 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
448.3 bits(972) 0.0 188/188(100%) 0/188(0%) Plus/Minus
Query        2  ISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYGRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRFIDR*H*VWKTYLTLPPSVDQFRYVGR*SHYIQLL*WTYT  565
                ISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYGRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRFIDR*H*VWKTYLTLPPSVDQFRYVGR*SHYIQLL*WTYT
Subject  15611  ISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYGRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRFIDR*H*VWKTYLTLPPSVDQFRYVGR*SHYIQLL*WTYT  16174

Range 2: 15611 to 16174 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
441.9 bits(958) 0.0 188/188(100%) 0/188(0%) Minus/Plus
Query        2  GVGPSEQLDVVALTSDVTELINTRGQGKICFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRY  565
                GVGPSEQLDVVALTSDVTELINTRGQGKICFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRY
Subject  15611  GVGPSEQLDVVALTSDVTELINTRGQGKICFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRY  16174

Range 3: 15610 to 16173 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
441.4 bits(957) 0.0 188/188(100%) 0/188(0%) Minus/Plus
Query        3  RCRSIRAAGCSGFNVRRNGIDQH*GAR*DMFSRLSVIDQ*SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYRKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QI  566
                RCRSIRAAGCSGFNVRRNGIDQH*GAR*DMFSRLSVIDQ*SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYRKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QI
Subject  15610  RCRSIRAAGCSGFNVRRNGIDQH*GAR*DMFSRLSVIDQ*SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYRKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QI  16173

Range 4: 15610 to 16173 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
420.8 bits(912) 0.0 188/188(100%) 0/188(0%) Plus/Minus
Query        3  YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKHILPCPLVLINSVTSDVKATTSSCSDGPTP  566
                YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKHILPCPLVLINSVTSDVKATTSSCSDGPTP
Subject  15610  YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKHILPCPLVLINSVTSDVKATTSSCSDGPTP  16173

Range 5: 15612 to 16175 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
400.6 bits(868) 0.0 188/188(100%) 0/188(0%) Minus/Plus
Query        1  V*VHQSSWM*WL*RPT*RN*STLGGKVRYVFQTQCYRSMKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLP*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GIXXXXXXXXX*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDI  564
                V*VHQSSWM*WL*RPT*RN*STLGGKVRYVFQTQCYRSMKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLP*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDI
Subject  15612  V*VHQSSWM*WL*RPT*RN*STLGGKVRYVFQTQCYRSMKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLP*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDI  16175

Range 6: 15612 to 15860 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.4 bits(418) 0.0 83/83(100%) 0/83(0%) Plus/Minus
Query      316  WPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH*SITLSLENISYLAP*C*SIPLRRTLKPLHPAALMDLH  564
                WPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH*SITLSLENISYLAP*C*SIPLRRTLKPLHPAALMDLH
Subject  15612  WPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH*SITLSLENISYLAP*C*SIPLRRTLKPLHPAALMDLH  15860

Range 7: 16002 to 16112 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
88.6 bits(187) 0.0 37/37(100%) 0/37(0%) Plus/Minus
Query       64  A*LGQYTLAEFSSL*VE*WWCE*NTS*RIAQCWLETH  174
                A*LGQYTLAEFSSL*VE*WWCE*NTS*RIAQCWLETH
Subject  16002  A*LGQYTLAEFSSL*VE*WWCE*NTS*RIAQCWLETH  16112

Range 8: 15915 to 15947 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.9 bits(59) 0.0 11/11(100%) 0/11(0%) Plus/Minus
Query      229  SFDLIRSPPYT  261
                SFDLIRSPPYT
Subject  15915  SFDLIRSPPYT  15947

Grapevine leafroll associated virus 3 isolate 621, complete genome

Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 8

Range 1: 15611 to 16174 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
448.3 bits(972) 0.0 188/188(100%) 0/188(0%) Plus/Minus
Query        2  ISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYGRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRFIDR*H*VWKTYLTLPPSVDQFRYVGR*SHYIQLL*WTYT  565
                ISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYGRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRFIDR*H*VWKTYLTLPPSVDQFRYVGR*SHYIQLL*WTYT
Subject  15611  ISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYGRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRFIDR*H*VWKTYLTLPPSVDQFRYVGR*SHYIQLL*WTYT  16174

Range 2: 15611 to 16174 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
441.9 bits(958) 0.0 188/188(100%) 0/188(0%) Minus/Plus
Query        2  GVGPSEQLDVVALTSDVTELINTRGQGKICFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRY  565
                GVGPSEQLDVVALTSDVTELINTRGQGKICFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRY
Subject  15611  GVGPSEQLDVVALTSDVTELINTRGQGKICFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRY  16174

Range 3: 15610 to 16173 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
441.4 bits(957) 0.0 188/188(100%) 0/188(0%) Minus/Plus
Query        3  RCRSIRAAGCSGFNVRRNGIDQH*GAR*DMFSRLSVIDQ*SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYRKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QI  566
                RCRSIRAAGCSGFNVRRNGIDQH*GAR*DMFSRLSVIDQ*SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYRKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QI
Subject  15610  RCRSIRAAGCSGFNVRRNGIDQH*GAR*DMFSRLSVIDQ*SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYRKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QI  16173

Range 4: 15610 to 16173 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
420.8 bits(912) 0.0 188/188(100%) 0/188(0%) Plus/Minus
Query        3  YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKHILPCPLVLINSVTSDVKATTSSCSDGPTP  566
                YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKHILPCPLVLINSVTSDVKATTSSCSDGPTP
Subject  15610  YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKHILPCPLVLINSVTSDVKATTSSCSDGPTP  16173

Range 5: 15612 to 16175 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
400.6 bits(868) 0.0 188/188(100%) 0/188(0%) Minus/Plus
Query        1  V*VHQSSWM*WL*RPT*RN*STLGGKVRYVFQTQCYRSMKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLP*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GIXXXXXXXXX*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDI  564
                V*VHQSSWM*WL*RPT*RN*STLGGKVRYVFQTQCYRSMKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLP*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDI
Subject  15612  V*VHQSSWM*WL*RPT*RN*STLGGKVRYVFQTQCYRSMKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLP*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDI  16175

Range 6: 15612 to 15860 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.4 bits(418) 0.0 83/83(100%) 0/83(0%) Plus/Minus
Query      316  WPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH*SITLSLENISYLAP*C*SIPLRRTLKPLHPAALMDLH  564
                WPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH*SITLSLENISYLAP*C*SIPLRRTLKPLHPAALMDLH
Subject  15612  WPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH*SITLSLENISYLAP*C*SIPLRRTLKPLHPAALMDLH  15860

Range 7: 16002 to 16112 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
88.6 bits(187) 0.0 37/37(100%) 0/37(0%) Plus/Minus
Query       64  A*LGQYTLAEFSSL*VE*WWCE*NTS*RIAQCWLETH  174
                A*LGQYTLAEFSSL*VE*WWCE*NTS*RIAQCWLETH
Subject  16002  A*LGQYTLAEFSSL*VE*WWCE*NTS*RIAQCWLETH  16112

Range 8: 15915 to 15947 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.9 bits(59) 0.0 11/11(100%) 0/11(0%) Plus/Minus
Query      229  SFDLIRSPPYT  261
                SFDLIRSPPYT
Subject  15915  SFDLIRSPPYT  15947

Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome

Sequence ID: KX756669.1 Length: 18313 Number of Matches: 8

Range 1: 15426 to 15989 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
448.3 bits(972) 0.0 188/188(100%) 0/188(0%) Plus/Minus
Query        2  ISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYGRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRFIDR*H*VWKTYLTLPPSVDQFRYVGR*SHYIQLL*WTYT  565
                ISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYGRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRFIDR*H*VWKTYLTLPPSVDQFRYVGR*SHYIQLL*WTYT
Subject  15426  ISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYGRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRFIDR*H*VWKTYLTLPPSVDQFRYVGR*SHYIQLL*WTYT  15989

Range 2: 15426 to 15989 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
441.9 bits(958) 0.0 188/188(100%) 0/188(0%) Minus/Plus
Query        2  GVGPSEQLDVVALTSDVTELINTRGQGKICFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRY  565
                GVGPSEQLDVVALTSDVTELINTRGQGKICFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRY
Subject  15426  GVGPSEQLDVVALTSDVTELINTRGQGKICFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRY  15989

Range 3: 15425 to 15988 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
441.4 bits(957) 0.0 188/188(100%) 0/188(0%) Minus/Plus
Query        3  RCRSIRAAGCSGFNVRRNGIDQH*GAR*DMFSRLSVIDQ*SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYRKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QI  566
                RCRSIRAAGCSGFNVRRNGIDQH*GAR*DMFSRLSVIDQ*SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYRKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QI
Subject  15425  RCRSIRAAGCSGFNVRRNGIDQH*GAR*DMFSRLSVIDQ*SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYRKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QI  15988

Range 4: 15425 to 15988 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
420.8 bits(912) 0.0 188/188(100%) 0/188(0%) Plus/Minus
Query        3  YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKHILPCPLVLINSVTSDVKATTSSCSDGPTP  566
                YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKHILPCPLVLINSVTSDVKATTSSCSDGPTP
Subject  15425  YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKHILPCPLVLINSVTSDVKATTSSCSDGPTP  15988

Range 5: 15427 to 15990 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
400.6 bits(868) 0.0 188/188(100%) 0/188(0%) Minus/Plus
Query        1  V*VHQSSWM*WL*RPT*RN*STLGGKVRYVFQTQCYRSMKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLP*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GIXXXXXXXXX*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDI  564
                V*VHQSSWM*WL*RPT*RN*STLGGKVRYVFQTQCYRSMKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLP*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDI
Subject  15427  V*VHQSSWM*WL*RPT*RN*STLGGKVRYVFQTQCYRSMKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLP*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDI  15990

Range 6: 15427 to 15675 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.4 bits(418) 0.0 83/83(100%) 0/83(0%) Plus/Minus
Query      316  WPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH*SITLSLENISYLAP*C*SIPLRRTLKPLHPAALMDLH  564
                WPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH*SITLSLENISYLAP*C*SIPLRRTLKPLHPAALMDLH
Subject  15427  WPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH*SITLSLENISYLAP*C*SIPLRRTLKPLHPAALMDLH  15675

Range 7: 15817 to 15927 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
88.6 bits(187) 0.0 37/37(100%) 0/37(0%) Plus/Minus
Query       64  A*LGQYTLAEFSSL*VE*WWCE*NTS*RIAQCWLETH  174
                A*LGQYTLAEFSSL*VE*WWCE*NTS*RIAQCWLETH
Subject  15817  A*LGQYTLAEFSSL*VE*WWCE*NTS*RIAQCWLETH  15927

Range 8: 15730 to 15762 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.9 bits(59) 0.0 11/11(100%) 0/11(0%) Plus/Minus
Query      229  SFDLIRSPPYT  261
                SFDLIRSPPYT
Subject  15730  SFDLIRSPPYT  15762

Grapevine leafroll associated virus 3 isolate 8 1 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130313.1 Length: 4711 Number of Matches: 8

Range 1: 1880 to 2443 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
446.4 bits(968) 0.0 187/188(99%) 0/188(0%) Plus/Minus
Query        2  ISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYGRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRFIDR*H*VWKTYLTLPPSVDQFRYVGR*SHYIQLL*WTYT  565
                ISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYGRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL* FRYRQIPLIVDIRFIDR*H*VWKTYLTLPPSVDQFRYVGR*SHYIQLL*WTYT
Subject   1880  ISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYGRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*GFRYRQIPLIVDIRFIDR*H*VWKTYLTLPPSVDQFRYVGR*SHYIQLL*WTYT  2443

Range 2: 1880 to 2443 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
441.9 bits(958) 0.0 188/188(100%) 0/188(0%) Minus/Plus
Query        2  GVGPSEQLDVVALTSDVTELINTRGQGKICFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRY  565
                GVGPSEQLDVVALTSDVTELINTRGQGKICFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRY
Subject   1880  GVGPSEQLDVVALTSDVTELINTRGQGKICFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRY  2443

Range 3: 1879 to 2442 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
439.1 bits(952) 0.0 187/188(99%) 0/188(0%) Minus/Plus
Query        3  RCRSIRAAGCSGFNVRRNGIDQH*GAR*DMFSRLSVIDQ*SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYRKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QI  566
                RCRSIRAAGCSGFNVRRNGIDQH*GAR*DMFSRLSVIDQ*SGYLR*AVFADNGS TDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYRKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QI
Subject   1879  RCRSIRAAGCSGFNVRRNGIDQH*GAR*DMFSRLSVIDQ*SGYLR*AVFADNGSPTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYRKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QI  2442

Range 4: 1879 to 2442 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
420.8 bits(912) 0.0 188/188(100%) 0/188(0%) Plus/Minus
Query        3  YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKHILPCPLVLINSVTSDVKATTSSCSDGPTP  566
                YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKHILPCPLVLINSVTSDVKATTSSCSDGPTP
Subject   1879  YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKHILPCPLVLINSVTSDVKATTSSCSDGPTP  2442

Range 5: 1881 to 2444 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
397.4 bits(861) 0.0 187/188(99%) 0/188(0%) Minus/Plus
Query        1  V*VHQSSWM*WL*RPT*RN*STLGGKVRYVFQTQCYRSMKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLP*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GIXXXXXXXXX*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDI  564
                V*VHQSSWM*WL*RPT*RN*STLGGKVRYVFQTQCYRSMKRISTMSGICR*RK YR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLP*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDI
Subject   1881  V*VHQSSWM*WL*RPT*RN*STLGGKVRYVFQTQCYRSMKRISTMSGICR*RKPYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLP*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDI  2444

Range 6: 1881 to 2129 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
191.2 bits(411) 0.0 82/83(99%) 0/83(0%) Plus/Minus
Query      316  WPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH*SITLSLENISYLAP*C*SIPLRRTLKPLHPAALMDLH  564
                WPLSYSPYLVVFDSRLSKERVCVVLRLSV LPLSANTAHRRYPLH*SITLSLENISYLAP*C*SIPLRRTLKPLHPAALMDLH
Subject   1881  WPLSYSPYLVVFDSRLSKERVCVVLRLSVGLPLSANTAHRRYPLH*SITLSLENISYLAP*C*SIPLRRTLKPLHPAALMDLH  2129

Range 7: 2271 to 2381 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
88.6 bits(187) 0.0 37/37(100%) 0/37(0%) Plus/Minus
Query       64  A*LGQYTLAEFSSL*VE*WWCE*NTS*RIAQCWLETH  174
                A*LGQYTLAEFSSL*VE*WWCE*NTS*RIAQCWLETH
Subject   2271  A*LGQYTLAEFSSL*VE*WWCE*NTS*RIAQCWLETH  2381

Range 8: 2184 to 2216 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.9 bits(59) 0.0 11/11(100%) 0/11(0%) Plus/Minus
Query      229  SFDLIRSPPYT  261
                SFDLIRSPPYT
Subject   2184  SFDLIRSPPYT  2216

Nucleotide Sequence (498 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
50
100
150
200
250
300
350
400
450
498

Descriptions

Alignments

Grapevine leafroll associated virus 3 isolate GH24, complete genome

Sequence ID: KM058745.1 Length: 18493 Number of Matches: 7

Range 1: 15788 to 16234 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
351.6 bits(761) 0.0 148/149(99%) 0/149(0%) Minus/Minus
Query       11  GRFDGLGTRH*IGLQYIRWVIPII*QSEIEAVRSKSFRHSVLR*GRVGWLDSFLY**CDRRMSIVSHVGTHYIRRCTIVLSSQYRLSNLRIA*IYRFTAEDCFHFVTILYVYVLHRRI*HEKLNHRDYHIPHVLGRNRSPFR*HQPTQP  457
                GRFDG GTRH*IGLQYIRWVIPII*QSEIEAVRSKSFRHSVLR*GRVGWLDSFLY**CDRRMSIVSHVGTHYIRRCTIVLSSQYRLSNLRIA*IYRFTAEDCFHFVTILYVYVLHRRI*HEKLNHRDYHIPHVLGRNRSPFR*HQPTQP
Subject  15788  GRFDGHGTRH*IGLQYIRWVIPII*QSEIEAVRSKSFRHSVLR*GRVGWLDSFLY**CDRRMSIVSHVGTHYIRRCTIVLSSQYRLSNLRIA*IYRFTAEDCFHFVTILYVYVLHRRI*HEKLNHRDYHIPHVLGRNRSPFR*HQPTQP  16234

Range 2: 15789 to 16235 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
341.5 bits(739) 0.0 148/149(99%) 0/149(0%) Plus/Plus
Query       12  GCVGWCYRKGDRLRPKTWGI**SL*FNFSCYILR*RT*T*RMVTKWKQSSAVNLYI*AILRLERRYWEESTMVHRRM*CVPT*DTILIRRSHY**RNESNQPTRP*RSTECLKDLLLTASISLC*IIGITQRIY*RPIQWRVPRPSKRP  458
                GCVGWCYRKGDRLRPKTWGI**SL*FNFSCYILR*RT*T*RMVTKWKQSSAVNLYI*AILRLERRYWEESTMVHRRM*CVPT*DTILIRRSHY**RNESNQPTRP*RSTECLKDLLLTASISLC*IIGITQRIY*RPIQWRVP PSKRP
Subject  15789  GCVGWCYRKGDRLRPKTWGI**SL*FNFSCYILR*RT*T*RMVTKWKQSSAVNLYI*AILRLERRYWEESTMVHRRM*CVPT*DTILIRRSHY**RNESNQPTRP*RSTECLKDLLLTASISLC*IIGITQRIY*RPIQWRVPWPSKRP  16235

Range 3: 15786 to 16235 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
337.4 bits(730) 0.0 149/150(99%) 0/150(0%) Minus/Minus
Query        9  WPLRWPRHTPLNWPSVYPLGNTYYLTKRNRSSKE*IF*ALRASLRPCRLVGFXXXXXXXSPYEYSISCRNALHSTMYHRTFLPISPL*PQNSLDIQVYRRGLFPLCNHPLRLCSSP*NIARKVES*RLSYSPCLGA*SIPLSITPTYATS  458
                WPL WPRHTPLNWPSVYPLGNTYYLTKRNRSSKE*IF*ALRASLRPCRLVGFVSLLVV*SPYEYSISCRNALHSTMYHRTFLPISPL*PQNSLDIQVYRRGLFPLCNHPLRLCSSP*NIARKVES*RLSYSPCLGA*SIPLSITPTYATS
Subject  15786  WPL*WPRHTPLNWPSVYPLGNTYYLTKRNRSSKE*IF*ALRASLRPCRLVGFVSLLVV*SPYEYSISCRNALHSTMYHRTFLPISPL*PQNSLDIQVYRRGLFPLCNHPLRLCSSP*NIARKVES*RLSYSPCLGA*SIPLSITPTYATS  16235

Range 4: 15788 to 16207 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
332.4 bits(719) 0.0 140/140(100%) 0/140(0%) Plus/Plus
Query       11  RLRRLVLSKGGSITPQDMGNMIVSMIQLFVLYSTVKNIDVKDGYKVETILGGKPVYLSYSEVREAILGGKYDGTSSNVVRSYMRYYTHTAITLLVEKRIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADILKANSM  430
                RLRRLVLSKGGSITPQDMGNMIVSMIQLFVLYSTVKNIDVKDGYKVETILGGKPVYLSYSEVREAILGGKYDGTSSNVVRSYMRYYTHTAITLLVEKRIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADILKANSM
Subject  15788  RLRRLVLSKGGSITPQDMGNMIVSMIQLFVLYSTVKNIDVKDGYKVETILGGKPVYLSYSEVREAILGGKYDGTSSNVVRSYMRYYTHTAITLLVEKRIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADILKANSM  16207

Range 5: 15784 to 16206 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
315.9 bits(683) 0.0 140/141(99%) 0/141(0%) Minus/Minus
Query        7  IELAFSISAG*YLLSNKAKSKQ*GVNLLGTPCFAKAV*AGWIRFSTSSVIAV*V*YLM*ERTTFDDVPSYFPPNIASLTSE*LRYTGLPPRIVSTL*PSFTSMFFTVEYSTKS*IIETIIFPMSWGVIDPPFDNTNLRNLI  429
                IELAFSISAG*YLLSNKAKSKQ*GVNLLGTPCFAKAV*AGWIRFSTSSVIAV*V*YLM*ERTTFDDVPSYFPPNIASLTSE*LRYTGLPPRIVSTL*PSFTSMFFTVEYSTKS*IIETIIFPMSWGVIDPPFDNTNLRNL+
Subject  15784  IELAFSISAG*YLLSNKAKSKQ*GVNLLGTPCFAKAV*AGWIRFSTSSVIAV*V*YLM*ERTTFDDVPSYFPPNIASLTSE*LRYTGLPPRIVSTL*PSFTSMFFTVEYSTKS*IIETIIFPMSWGVIDPPFDNTNLRNLV  16206

Range 6: 15784 to 16137 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
282.4 bits(610) 0.0 117/118(99%) 0/118(0%) Plus/Plus
Query        7  YEVA*VGVIERGIDYAPRHGEYDSLYDSTFRAIFYGEEHRRKGWLQSGNNPRR*TCISKLF*G*RGDIGRKVRWYIVECSAFLHEILYSYGDHTTSRETNPTSLHGLSEARSA*KIYS  360
                +EVA*VGVIERGIDYAPRHGEYDSLYDSTFRAIFYGEEHRRKGWLQSGNNPRR*TCISKLF*G*RGDIGRKVRWYIVECSAFLHEILYSYGDHTTSRETNPTSLHGLSEARSA*KIYS
Subject  15784  HEVA*VGVIERGIDYAPRHGEYDSLYDSTFRAIFYGEEHRRKGWLQSGNNPRR*TCISKLF*G*RGDIGRKVRWYIVECSAFLHEILYSYGDHTTSRETNPTSLHGLSEARSA*KIYS  16137

Range 7: 16177 to 16233 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.5 bits(106) 0.0 18/19(95%) 0/19(0%) Plus/Plus
Query      400  PSGYTEGQFNGVCRGHRSG  456
                PSGYTEGQFNGVCRGH+SG
Subject  16177  PSGYTEGQFNGVCRGHQSG  16233

Grapevine leafroll associated virus 3 isolate 3 3 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130283.1 Length: 4711 Number of Matches: 6

Range 1: 2057 to 2476 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
292.0 bits(631) 0.0 120/140(86%) 0/140(0%) Plus/Plus
Query       11  RLRRLVLSKGGSITPQDMGNMIVSMIQLFVLYSTVKNIDVKDGYKVETILGGKPVYLSYSEVREAILGGKYDGTSSNVVRSYMRYYTHTAITLLVEKRIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADILKANSM  430
                RLRRLVLSKGGS TP+DMGNMIV+MIQLFVLYSTVKNI VKDGY+VET LG K VYLSYSEVREAILGGKYD + +N VRS+MRY+THT ITLL+EK+IQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPAD+LKAN+M
Subject   2057  RLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAM  2476

Range 2: 2056 to 2475 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
180.2 bits(387) 0.0 92/140(66%) 0/140(0%) Minus/Minus
Query       10  IELAFSISAG*YLLSNKAKSKQ*GVNLLGTPCFAKAV*AGWIRFSTSSVIAV*V*YLM*ERTTFDDVPSYFPPNIASLTSE*LRYTGLPPRIVSTL*PSFTSMFFTVEYSTKS*IIETIIFPMSWGVIDPPFDNTNLRNL  429
                I LAF+ SAG*YLLS+ AKSKQ GVNL GTPC A+AV AG I FS SSVI V*V YL+ +RT      SYFPPNIASLTSE*L+ T   P  VSTL PS T +FFTVE STKS I+ TI+FP+S GV  PPF+ T+LR+L
Subject   2056  IALAFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISSVIVV*VKYLIKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIMFPISRGV*LPPFERTSLRSL  2475

Range 3: 2231 to 2500 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.9 bits(131) 0.0 35/90(39%) 0/90(0%) Minus/Minus
Query      185  RFDGLGTRH*IGLQYIRWVIPII*QSEIEAVRSKSFRHSVLR*GRVGWLDSFLY**CDRRMSIVSHVGTHYIRRCTIVLSSQYRLSNLRI  454
                RF+     H + LQ++  VI II   E+EAVRS+  R +VL *G V WL+  LY * +  +S + H G+H +    +V  S Y     RI
Subject   2231  RFNRYSASHCVSLQHVCRVISIIQ*CEVEAVRSEPLRDAVLS*GSVRWLNFLLYK*RNSGVSKIPHKGSHSVGWRRVVFPS*YSFPYFRI  2500

Range 4: 2105 to 2194 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.0 bits(81) 0.0 13/30(43%) 0/30(0%) Minus/Minus
Query       59  HFVTILYVYVLHRRI*HEKLNHRDYHIPHV  148
                H + I   Y+L+ R+ +EKL H  YH+PH+
Subject   2105  HPIPIFDAYILYSRVEYEKLYHGHYHVPHI  2194

Range 5: 2080 to 2406 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.2 bits(149) 0.0 37/109(34%) 0/109(0%) Plus/Plus
Query       34  ERGIDYAPRHGEYDSLYDSTFRAIFYGEEHRRKGWLQSGNNPRR*TCISKLF*G*RGDIGRKVRWYIVECSAFLHEILYSYGDHTTSRETNPTSLHGLSEARSA*KIYS  360
                ER      R+GE+DS +D+TFR + Y +E++R+ W+  G+  R    + +LF      I R++R    +  A L+E+ YS+  + T RE N  S+H  S AR   +++S
Subject   2080  ERRESNTTRYGEHDSGHDTTFRTLLYCKEYKRQRWV*GGDRIRSKEGLLELFGSKGSYIRREIRRVSNQHCAILYEVFYSHHYYATYREENSASVHCPS*ARRPEEVHS  2406

Range 6: 2076 to 2477 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.1 bits(114) 0.0 47/134(35%) 0/134(0%) Plus/Plus
Query       30  YRKGDRLRPKTWGI**SL*FNFSCYILR*RT*T*RMVTKWKQSSAVNLYI*AILRLERRYWEESTMVHRRM*CVPT*DTILIRRSHY**RNESNQPTRP*RSTECLKDLLLTASISLC*IIGITQRIY*RPIQW  431
                +RK      + WG **  *+NFS   L *R *  +M   W+ +       * I +  + Y E +T   +   C P *  +L     Y *R + +Q T P* ST   +  L TAS S   II IT++  *R  QW
Subject   2076  FRKAGVKHHEIWGT**WP*YNFSYSTLL*RI*ASKMGIGWRPN*VKRRST*VIRK*GKLY*EGNTTRLQPTLCDPL*GILLTPLLRYL*RRKFSQRTLP*LSTASRRGSLRTASTSHYWIIDITRQTC*RLTQW  2477

Grapevine leafroll associated virus 3 isolate 3 5 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130284.1 Length: 4711 Number of Matches: 6

Range 1: 2057 to 2476 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
292.0 bits(631) 0.0 120/140(86%) 0/140(0%) Plus/Plus
Query       11  RLRRLVLSKGGSITPQDMGNMIVSMIQLFVLYSTVKNIDVKDGYKVETILGGKPVYLSYSEVREAILGGKYDGTSSNVVRSYMRYYTHTAITLLVEKRIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADILKANSM  430
                RLRRLVLSKGGS TP+DMGNMIV+MIQLFVLYSTVKNI VKDGY+VET LG K VYLSYSEVREAILGGKYD + +N VRS+MRY+THT ITLL+EK+IQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPAD+LKAN+M
Subject   2057  RLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAM  2476

Range 2: 2056 to 2475 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
180.2 bits(387) 0.0 92/140(66%) 0/140(0%) Minus/Minus
Query       10  IELAFSISAG*YLLSNKAKSKQ*GVNLLGTPCFAKAV*AGWIRFSTSSVIAV*V*YLM*ERTTFDDVPSYFPPNIASLTSE*LRYTGLPPRIVSTL*PSFTSMFFTVEYSTKS*IIETIIFPMSWGVIDPPFDNTNLRNL  429
                I LAF+ SAG*YLLS+ AKSKQ GVNL GTPC A+AV AG I FS SSVI V*V YL+ +RT      SYFPPNIASLTSE*L+ T   P  VSTL PS T +FFTVE STKS I+ TI+FP+S GV  PPF+ T+LR+L
Subject   2056  IALAFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISSVIVV*VKYLIKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIMFPISRGV*LPPFERTSLRSL  2475

Range 3: 2231 to 2500 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.9 bits(131) 0.0 35/90(39%) 0/90(0%) Minus/Minus
Query      185  RFDGLGTRH*IGLQYIRWVIPII*QSEIEAVRSKSFRHSVLR*GRVGWLDSFLY**CDRRMSIVSHVGTHYIRRCTIVLSSQYRLSNLRI  454
                RF+     H + LQ++  VI II   E+EAVRS+  R +VL *G V WL+  LY * +  +S + H G+H +    +V  S Y     RI
Subject   2231  RFNRYSASHCVSLQHVCRVISIIQ*CEVEAVRSEPLRDAVLS*GSVRWLNFLLYK*RNSGVSKIPHKGSHSVGWRRVVFPS*YSFPYFRI  2500

Range 4: 2105 to 2194 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.0 bits(81) 0.0 13/30(43%) 0/30(0%) Minus/Minus
Query       59  HFVTILYVYVLHRRI*HEKLNHRDYHIPHV  148
                H + I   Y+L+ R+ +EKL H  YH+PH+
Subject   2105  HPIPIFDAYILYSRVEYEKLYHGHYHVPHI  2194

Range 5: 2080 to 2406 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.2 bits(149) 0.0 37/109(34%) 0/109(0%) Plus/Plus
Query       34  ERGIDYAPRHGEYDSLYDSTFRAIFYGEEHRRKGWLQSGNNPRR*TCISKLF*G*RGDIGRKVRWYIVECSAFLHEILYSYGDHTTSRETNPTSLHGLSEARSA*KIYS  360
                ER      R+GE+DS +D+TFR + Y +E++R+ W+  G+  R    + +LF      I R++R    +  A L+E+ YS+  + T RE N  S+H  S AR   +++S
Subject   2080  ERRESNTTRYGEHDSGHDTTFRTLLYCKEYKRQRWV*GGDRIRSKEGLLELFGSKGSYIRREIRRVSNQHCAILYEVFYSHHYYATYREENSASVHCPS*ARRPEEVHS  2406

Range 6: 2076 to 2477 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.1 bits(114) 0.0 47/134(35%) 0/134(0%) Plus/Plus
Query       30  YRKGDRLRPKTWGI**SL*FNFSCYILR*RT*T*RMVTKWKQSSAVNLYI*AILRLERRYWEESTMVHRRM*CVPT*DTILIRRSHY**RNESNQPTRP*RSTECLKDLLLTASISLC*IIGITQRIY*RPIQW  431
                +RK      + WG **  *+NFS   L *R *  +M   W+ +       * I +  + Y E +T   +   C P *  +L     Y *R + +Q T P* ST   +  L TAS S   II IT++  *R  QW
Subject   2076  FRKAGVKHHEIWGT**WP*YNFSYSTLL*RI*ASKMGIGWRPN*VKRRST*VIRK*GKLY*EGNTTRLQPTLCDPL*GILLTPLLRYL*RRKFSQRTLP*LSTASRRGSLRTASTSHYWIIDITRQTC*RLTQW  2477

Grapevine leafroll associated virus 3 isolate 3 7 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130285.1 Length: 4711 Number of Matches: 6

Range 1: 2057 to 2476 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
292.0 bits(631) 0.0 120/140(86%) 0/140(0%) Plus/Plus
Query       11  RLRRLVLSKGGSITPQDMGNMIVSMIQLFVLYSTVKNIDVKDGYKVETILGGKPVYLSYSEVREAILGGKYDGTSSNVVRSYMRYYTHTAITLLVEKRIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADILKANSM  430
                RLRRLVLSKGGS TP+DMGNMIV+MIQLFVLYSTVKNI VKDGY+VET LG K VYLSYSEVREAILGGKYD + +N VRS+MRY+THT ITLL+EK+IQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPAD+LKAN+M
Subject   2057  RLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAM  2476

Range 2: 2056 to 2475 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
180.2 bits(387) 0.0 92/140(66%) 0/140(0%) Minus/Minus
Query       10  IELAFSISAG*YLLSNKAKSKQ*GVNLLGTPCFAKAV*AGWIRFSTSSVIAV*V*YLM*ERTTFDDVPSYFPPNIASLTSE*LRYTGLPPRIVSTL*PSFTSMFFTVEYSTKS*IIETIIFPMSWGVIDPPFDNTNLRNL  429
                I LAF+ SAG*YLLS+ AKSKQ GVNL GTPC A+AV AG I FS SSVI V*V YL+ +RT      SYFPPNIASLTSE*L+ T   P  VSTL PS T +FFTVE STKS I+ TI+FP+S GV  PPF+ T+LR+L
Subject   2056  IALAFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISSVIVV*VKYLIKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIMFPISRGV*LPPFERTSLRSL  2475

Range 3: 2231 to 2500 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.9 bits(131) 0.0 35/90(39%) 0/90(0%) Minus/Minus
Query      185  RFDGLGTRH*IGLQYIRWVIPII*QSEIEAVRSKSFRHSVLR*GRVGWLDSFLY**CDRRMSIVSHVGTHYIRRCTIVLSSQYRLSNLRI  454
                RF+     H + LQ++  VI II   E+EAVRS+  R +VL *G V WL+  LY * +  +S + H G+H +    +V  S Y     RI
Subject   2231  RFNRYSASHCVSLQHVCRVISIIQ*CEVEAVRSEPLRDAVLS*GSVRWLNFLLYK*RNSGVSKIPHKGSHSVGWRRVVFPS*YSFPYFRI  2500

Range 4: 2105 to 2194 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.2 bits(77) 0.0 12/30(40%) 0/30(0%) Minus/Minus
Query       59  HFVTILYVYVLHRRI*HEKLNHRDYHIPHV  148
                H + I   Y+ + R+ +EKL H  YH+PH+
Subject   2105  HPIPIFDAYIFYSRVEYEKLYHGHYHVPHI  2194

Range 5: 2080 to 2406 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
69.3 bits(145) 0.0 36/109(33%) 0/109(0%) Plus/Plus
Query       34  ERGIDYAPRHGEYDSLYDSTFRAIFYGEEHRRKGWLQSGNNPRR*TCISKLF*G*RGDIGRKVRWYIVECSAFLHEILYSYGDHTTSRETNPTSLHGLSEARSA*KIYS  360
                ER      R+GE+DS +D+TFR + Y ++++R+ W+  G+  R    + +LF      I R++R    +  A L+E+ YS+  + T RE N  S+H  S AR   +++S
Subject   2080  ERRESNTTRYGEHDSGHDTTFRTLLYCKKYKRQRWV*GGDRIRSKEGLLELFGSKGSYIRREIRRVSNQHCAILYEVFYSHHYYATYREENSASVHCPS*ARRPEEVHS  2406

Range 6: 2076 to 2477 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.8 bits(111) 0.0 46/134(34%) 0/134(0%) Plus/Plus
Query       30  YRKGDRLRPKTWGI**SL*FNFSCYILR*RT*T*RMVTKWKQSSAVNLYI*AILRLERRYWEESTMVHRRM*CVPT*DTILIRRSHY**RNESNQPTRP*RSTECLKDLLLTASISLC*IIGITQRIY*RPIQW  431
                +RK      + WG **  *+NFS   L *+ *  +M   W+ +       * I +  + Y E +T   +   C P *  +L     Y *R + +Q T P* ST   +  L TAS S   II IT++  *R  QW
Subject   2076  FRKAGVKHHEIWGT**WP*YNFSYSTLL*KI*ASKMGIGWRPN*VKRRST*VIRK*GKLY*EGNTTRLQPTLCDPL*GILLTPLLRYL*RRKFSQRTLP*LSTASRRGSLRTASTSHYWIIDITRQTC*RLTQW  2477

Grapevine leafroll associated virus 3 isolate 3 8 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130286.1 Length: 4711 Number of Matches: 6

Range 1: 2057 to 2476 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
292.0 bits(631) 0.0 120/140(86%) 0/140(0%) Plus/Plus
Query       11  RLRRLVLSKGGSITPQDMGNMIVSMIQLFVLYSTVKNIDVKDGYKVETILGGKPVYLSYSEVREAILGGKYDGTSSNVVRSYMRYYTHTAITLLVEKRIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADILKANSM  430
                RLRRLVLSKGGS TP+DMGNMIV+MIQLFVLYSTVKNI VKDGY+VET LG K VYLSYSEVREAILGGKYD + +N VRS+MRY+THT ITLL+EK+IQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPAD+LKAN+M
Subject   2057  RLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAM  2476

Range 2: 2056 to 2475 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
180.2 bits(387) 0.0 92/140(66%) 0/140(0%) Minus/Minus
Query       10  IELAFSISAG*YLLSNKAKSKQ*GVNLLGTPCFAKAV*AGWIRFSTSSVIAV*V*YLM*ERTTFDDVPSYFPPNIASLTSE*LRYTGLPPRIVSTL*PSFTSMFFTVEYSTKS*IIETIIFPMSWGVIDPPFDNTNLRNL  429
                I LAF+ SAG*YLLS+ AKSKQ GVNL GTPC A+AV AG I FS SSVI V*V YL+ +RT      SYFPPNIASLTSE*L+ T   P  VSTL PS T +FFTVE STKS I+ TI+FP+S GV  PPF+ T+LR+L
Subject   2056  IALAFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISSVIVV*VKYLIKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIMFPISRGV*LPPFERTSLRSL  2475

Range 3: 2231 to 2500 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.9 bits(131) 0.0 35/90(39%) 0/90(0%) Minus/Minus
Query      185  RFDGLGTRH*IGLQYIRWVIPII*QSEIEAVRSKSFRHSVLR*GRVGWLDSFLY**CDRRMSIVSHVGTHYIRRCTIVLSSQYRLSNLRI  454
                RF+     H + LQ++  VI II   E+EAVRS+  R +VL *G V WL+  LY * +  +S + H G+H +    +V  S Y     RI
Subject   2231  RFNRYSASHCVSLQHVCRVISIIQ*CEVEAVRSEPLRDAVLS*GSVRWLNFLLYK*RNSGVSKIPHKGSHSVGWRRVVFPS*YSFPYFRI  2500

Range 4: 2105 to 2194 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.0 bits(81) 0.0 13/30(43%) 0/30(0%) Minus/Minus
Query       59  HFVTILYVYVLHRRI*HEKLNHRDYHIPHV  148
                H + I   Y+L+ R+ +EKL H  YH+PH+
Subject   2105  HPIPIFDAYILYSRVEYEKLYHGHYHVPHI  2194

Range 5: 2080 to 2406 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.2 bits(149) 0.0 37/109(34%) 0/109(0%) Plus/Plus
Query       34  ERGIDYAPRHGEYDSLYDSTFRAIFYGEEHRRKGWLQSGNNPRR*TCISKLF*G*RGDIGRKVRWYIVECSAFLHEILYSYGDHTTSRETNPTSLHGLSEARSA*KIYS  360
                ER      R+GE+DS +D+TFR + Y +E++R+ W+  G+  R    + +LF      I R++R    +  A L+E+ YS+  + T RE N  S+H  S AR   +++S
Subject   2080  ERRESNTTRYGEHDSGHDTTFRTLLYCKEYKRQRWV*GGDRIRSKEGLLELFGSKGSYIRREIRRVSNQHCAILYEVFYSHHYYATYREENSASVHCPS*ARRPEEVHS  2406

Range 6: 2076 to 2477 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.1 bits(114) 0.0 47/134(35%) 0/134(0%) Plus/Plus
Query       30  YRKGDRLRPKTWGI**SL*FNFSCYILR*RT*T*RMVTKWKQSSAVNLYI*AILRLERRYWEESTMVHRRM*CVPT*DTILIRRSHY**RNESNQPTRP*RSTECLKDLLLTASISLC*IIGITQRIY*RPIQW  431
                +RK      + WG **  *+NFS   L *R *  +M   W+ +       * I +  + Y E +T   +   C P *  +L     Y *R + +Q T P* ST   +  L TAS S   II IT++  *R  QW
Subject   2076  FRKAGVKHHEIWGT**WP*YNFSYSTLL*RI*ASKMGIGWRPN*VKRRST*VIRK*GKLY*EGNTTRLQPTLCDPL*GILLTPLLRYL*RRKFSQRTLP*LSTASRRGSLRTASTSHYWIIDITRQTC*RLTQW  2477

Nucleotide Sequence (878 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
88
176
264
352
440
528
616
704
792
878

Descriptions

Alignments

Grapevine leafroll associated virus 3 isolate 9 25 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130328.1 Length: 4711 Number of Matches: 11

Range 1: 646 to 1302 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
484.0 bits(1050) 0.0 213/219(97%) 0/219(0%) Plus/Minus
Query        3  DRVCLAGKSALCIK*ALV*LSGRTYPGGSGGASFADLKER*SCLSFSNRDS*KSTCV*APMNYQ*KVNISKFFTNL*TSIVATSFAIVGRRCVRCYRPLPSCF*TPAV*LNSMLVLRRC*TDRTSDERSLSCTERISVVLHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ  659
                D++ ++GKSALCIK*AL *LSGRTYPGGSGGASFADLKER*SCLSFSNRDS*KSTCV*APMNYQ*KVNISKFFTNL*TSIVATSFAIVGRRCVRCYRPLPSCF*TPAV*LNSMLVLRRC*TDRTSDERSLSCTERISVVLHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ
Subject    646  DKL*VSGKSALCIK*ALT*LSGRTYPGGSGGASFADLKER*SCLSFSNRDS*KSTCV*APMNYQ*KVNISKFFTNL*TSIVATSFAIVGRRCVRCYRPLPSCF*TPAV*LNSMLVLRRC*TDRTSDERSLSCTERISVVLHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ  1302

Range 2: 440 to 673 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
182.1 bits(391) 0.0 78/78(100%) 0/78(0%) Plus/Minus
Query      632  EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSINAALIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLS  865
                EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSINAALIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLS
Subject    440  EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSINAALIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLS  673

Range 3: 432 to 1289 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
642.1 bits(1395) 0.0 279/286(98%) 0/286(0%) Plus/Minus
Query       16  WRESLLFVSNKPSYNYLGERTREDQEELHSLT*KKDSLVCLSATATHESLHAYKPP*IINKR*IFLNFSPIYRHRSXXXXXXXXEDVV*GVIGRYRLVSKRLLSS*IPC*YCVVVEQIVRRTNAVYRVRKEFRWYSMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLHQCSINLHCHLY*YFPWLVNNFRFVGNSRQVQSYSLAHSLQELVCFY  873
                +RESLLFVSNKPS+NYLGER REDQEELHSLT*KKDSLVCLSATATHESLH YKPP*IINKR*IFLNFSPIYRHRS*LLLLQ*LEDVV*GVIGRYRLVSKRLLSS*IPC*YCVVVEQIVRRTNAVYRVRKEFRWYSMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLHQCSINLHCHLY*YFPWLVNNFRFVGNSRQVQSYSLAHSLQELV  +
Subject    432  YRESLLFVSNKPSHNYLGERIREDQEELHSLT*KKDSLVCLSATATHESLHVYKPP*IINKR*IFLNFSPIYRHRS*LLLLQ*LEDVV*GVIGRYRLVSKRLLSS*IPC*YCVVVEQIVRRTNAVYRVRKEFRWYSMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLHQCSINLHCHLY*YFPWLVNNFRFVGNSRQVQSYSLAHSLQELVWIF  1289

Range 4: 441 to 1286 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
628.8 bits(1366) 0.0 278/282(99%) 0/282(0%) Minus/Plus
Query       19  DKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADDAATKTKFFLYVMQIACXXXXXXXXXFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQLLQKK*LRSMSINW*KI*KYLPFIDNSWGLIRM*TFMSRGC*KTNKTIFLSSQRMKLLLILPGTFAQIVIRGLI*YKEQTFP  864
                DKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADDAATKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQLLQKK*LRSMSINW*KI*KYLPFIDNSWGLI M*TFMSRGC*KTNKTIFLSSQRMKLLLILP TFAQIV+ GLI*YKEQTFP
Subject    441  DKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADDAATKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQLLQKK*LRSMSINW*KI*KYLPFIDNSWGLIHM*TFMSRGC*KTNKTIFLSSQRMKLLLILPDTFAQIVM*GLI*YKEQTFP  1286

Range 5: 431 to 1303 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
628.4 bits(1365) 0.0 284/291(98%) 0/291(0%) Minus/Plus
Query        2  DKSRQVLEDYGQGNSFGLDGSYPQTESY*RARESISRGGNED*CCIDGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWSTTEILSVHXXXXXXXXXXXXXXRNTSMEFS*TAGV*KQDGNGR*HLTQRLPTIAKEVATIDVYKLVKNLEIFTFY**FMGAYTHVDFHESRLLKDKQDYLSFKSANEAPPDPPGYVRPDSYTRAYLIQRADFPAKHTLS  874
                ++SRQVLEDYGQGNSFGLDGSYPQTESY*RARESISRGGNED*CCIDGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWSTTEILSVHDRLRSSDVRSVQQRRNTSMEFS*TAGV*KQDGNGR*HLTQRLPTIAKEVATIDVYKLVKNLEIFTFY**FMGAYTHVDFHESRLLKDKQDYLSFKSANEAPPDPPGYVRPDSY RAYLIQRADFP   +LS
Subject    431  ERSRQVLEDYGQGNSFGLDGSYPQTESY*RARESISRGGNED*CCIDGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWSTTEILSVHDRLRSSDVRSVQQRRNTSMEFS*TAGV*KQDGNGR*HLTQRLPTIAKEVATIDVYKLVKNLEIFTFY**FMGAYTHVDFHESRLLKDKQDYLSFKSANEAPPDPPGYVRPDSYVRAYLIQRADFPDTQSLS  1303

Range 6: 713 to 1285 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
450.1 bits(976) 0.0 188/191(98%) 0/191(0%) Plus/Minus
Query       20  GKVCSLYQISPRITIWANVPGRIRRSFIR*LERKIVLFVFQQPRLMKVYMRISPHELSIKGKYF*IFHQFIDIDRSYFFCNSWKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP  592
                GKVCSLYQISP ITIWANV GRIRRSFIR*LERKIVLFVFQQPRLMKVYM ISPHELSIKGKYF*IFHQFIDIDRSYFFCNSWKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP
Subject    713  GKVCSLYQISPHITIWANVSGRIRRSFIR*LERKIVLFVFQQPRLMKVYMCISPHELSIKGKYF*IFHQFIDIDRSYFFCNSWKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP  1285

Range 7: 427 to 504 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.3 bits(121) 0.0 24/26(92%) 0/26(0%) Plus/Minus
Query      801  VCG*LPSSPKLFPCP*SSRTCLLLSQ  878
                VCG*LPSSPKLFPCP*SSRTCL LS+
Subject    427  VCG*LPSSPKLFPCP*SSRTCLDLSR  504

Range 8: 559 to 594 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
32.2 bits(64) 0.0 12/12(100%) 0/12(0%) Plus/Minus
Query      711  P*PSYTAPSMQH  746
                P*PSYTAPSMQH
Subject    559  P*PSYTAPSMQH  594

Range 9: 694 to 1194 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
276.9 bits(598) 0.0 166/167(99%) 0/167(0%) Minus/Plus
Query      111  TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMEYHRNSXXXXXXXXXXXTICSTTTQY*HGI*LDSRRLEXXXXXXXXXXXTSSNYCKRSSYDRCL*IGEKFRNXXXXXXXXXXXYACRLS*VAVAERQTRLSFFQ  611
                TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMEYHRNSFRTR*TAFVRRTICSTTTQY*HGI*LDSRRLETRR*RPITPYTTSSNYCKRSSYDRCL*IGEKFRNIYLLLIIHGGLY CRLS*VAVAERQTRLSFFQ
Subject    694  TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMEYHRNSFRTR*TAFVRRTICSTTTQY*HGI*LDSRRLETRR*RPITPYTTSSNYCKRSSYDRCL*IGEKFRNIYLLLIIHGGLYTCRLS*VAVAERQTRLSFFQ  1194

Range 10: 439 to 642 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
162.4 bits(348) 0.0 68/68(100%) 0/68(0%) Minus/Plus
Query      663  QTSS*RLWARE*LWT*RELPTNRKLLTSQGKYQ*RWQ*RLMLH*WSCVRRLWAPMTQQLRQNSSCT*C  866
                QTSS*RLWARE*LWT*RELPTNRKLLTSQGKYQ*RWQ*RLMLH*WSCVRRLWAPMTQQLRQNSSCT*C
Subject    439  QTSS*RLWARE*LWT*RELPTNRKLLTSQGKYQ*RWQ*RLMLH*WSCVRRLWAPMTQQLRQNSSCT*C  642

Range 11: 1237 to 1302 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.3 bits(75) 0.0 17/22(77%) 0/22(0%) Minus/Plus
Query        3  PR*LYEGLFDTKSRLSRQTHSI  68
                PR*L EGLFDTKSRLSR +  I
Subject   1237  PR*LCEGLFDTKSRLSRYSKLI  1302

Grapevine leafroll associated virus 3 isolate 9 1010 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130330.1 Length: 4711 Number of Matches: 11

Range 1: 646 to 1302 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
484.0 bits(1050) 0.0 213/219(97%) 0/219(0%) Plus/Minus
Query        3  DRVCLAGKSALCIK*ALV*LSGRTYPGGSGGASFADLKER*SCLSFSNRDS*KSTCV*APMNYQ*KVNISKFFTNL*TSIVATSFAIVGRRCVRCYRPLPSCF*TPAV*LNSMLVLRRC*TDRTSDERSLSCTERISVVLHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ  659
                D++ ++GKSALCIK*AL *LSGRTYPGGSGGASFADLKER*SCLSFSNRDS*KSTCV*APMNYQ*KVNISKFFTNL*TSIVATSFAIVGRRCVRCYRPLPSCF*TPAV*LNSMLVLRRC*TDRTSDERSLSCTERISVVLHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ
Subject    646  DKL*VSGKSALCIK*ALT*LSGRTYPGGSGGASFADLKER*SCLSFSNRDS*KSTCV*APMNYQ*KVNISKFFTNL*TSIVATSFAIVGRRCVRCYRPLPSCF*TPAV*LNSMLVLRRC*TDRTSDERSLSCTERISVVLHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ  1302

Range 2: 440 to 673 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
182.1 bits(391) 0.0 78/78(100%) 0/78(0%) Plus/Minus
Query      632  EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSINAALIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLS  865
                EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSINAALIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLS
Subject    440  EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSINAALIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLS  673

Range 3: 432 to 1289 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
642.1 bits(1395) 0.0 279/286(98%) 0/286(0%) Plus/Minus
Query       16  WRESLLFVSNKPSYNYLGERTREDQEELHSLT*KKDSLVCLSATATHESLHAYKPP*IINKR*IFLNFSPIYRHRSXXXXXXXXEDVV*GVIGRYRLVSKRLLSS*IPC*YCVVVEQIVRRTNAVYRVRKEFRWYSMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLHQCSINLHCHLY*YFPWLVNNFRFVGNSRQVQSYSLAHSLQELVCFY  873
                +RESLLFVSNKPS+NYLGER REDQEELHSLT*KKDSLVCLSATATHESLH YKPP*IINKR*IFLNFSPIYRHRS*LLLLQ*LEDVV*GVIGRYRLVSKRLLSS*IPC*YCVVVEQIVRRTNAVYRVRKEFRWYSMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLHQCSINLHCHLY*YFPWLVNNFRFVGNSRQVQSYSLAHSLQELV  +
Subject    432  YRESLLFVSNKPSHNYLGERIREDQEELHSLT*KKDSLVCLSATATHESLHVYKPP*IINKR*IFLNFSPIYRHRS*LLLLQ*LEDVV*GVIGRYRLVSKRLLSS*IPC*YCVVVEQIVRRTNAVYRVRKEFRWYSMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLHQCSINLHCHLY*YFPWLVNNFRFVGNSRQVQSYSLAHSLQELVWIF  1289

Range 4: 441 to 1286 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
628.8 bits(1366) 0.0 278/282(99%) 0/282(0%) Minus/Plus
Query       19  DKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADDAATKTKFFLYVMQIACXXXXXXXXXFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQLLQKK*LRSMSINW*KI*KYLPFIDNSWGLIRM*TFMSRGC*KTNKTIFLSSQRMKLLLILPGTFAQIVIRGLI*YKEQTFP  864
                DKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADDAATKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQLLQKK*LRSMSINW*KI*KYLPFIDNSWGLI M*TFMSRGC*KTNKTIFLSSQRMKLLLILP TFAQIV+ GLI*YKEQTFP
Subject    441  DKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADDAATKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQLLQKK*LRSMSINW*KI*KYLPFIDNSWGLIHM*TFMSRGC*KTNKTIFLSSQRMKLLLILPDTFAQIVM*GLI*YKEQTFP  1286

Range 5: 431 to 1303 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
628.4 bits(1365) 0.0 284/291(98%) 0/291(0%) Minus/Plus
Query        2  DKSRQVLEDYGQGNSFGLDGSYPQTESY*RARESISRGGNED*CCIDGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWSTTEILSVHXXXXXXXXXXXXXXRNTSMEFS*TAGV*KQDGNGR*HLTQRLPTIAKEVATIDVYKLVKNLEIFTFY**FMGAYTHVDFHESRLLKDKQDYLSFKSANEAPPDPPGYVRPDSYTRAYLIQRADFPAKHTLS  874
                ++SRQVLEDYGQGNSFGLDGSYPQTESY*RARESISRGGNED*CCIDGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWSTTEILSVHDRLRSSDVRSVQQRRNTSMEFS*TAGV*KQDGNGR*HLTQRLPTIAKEVATIDVYKLVKNLEIFTFY**FMGAYTHVDFHESRLLKDKQDYLSFKSANEAPPDPPGYVRPDSY RAYLIQRADFP   +LS
Subject    431  ERSRQVLEDYGQGNSFGLDGSYPQTESY*RARESISRGGNED*CCIDGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWSTTEILSVHDRLRSSDVRSVQQRRNTSMEFS*TAGV*KQDGNGR*HLTQRLPTIAKEVATIDVYKLVKNLEIFTFY**FMGAYTHVDFHESRLLKDKQDYLSFKSANEAPPDPPGYVRPDSYVRAYLIQRADFPDTQSLS  1303

Range 6: 713 to 1285 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
450.1 bits(976) 0.0 188/191(98%) 0/191(0%) Plus/Minus
Query       20  GKVCSLYQISPRITIWANVPGRIRRSFIR*LERKIVLFVFQQPRLMKVYMRISPHELSIKGKYF*IFHQFIDIDRSYFFCNSWKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP  592
                GKVCSLYQISP ITIWANV GRIRRSFIR*LERKIVLFVFQQPRLMKVYM ISPHELSIKGKYF*IFHQFIDIDRSYFFCNSWKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP
Subject    713  GKVCSLYQISPHITIWANVSGRIRRSFIR*LERKIVLFVFQQPRLMKVYMCISPHELSIKGKYF*IFHQFIDIDRSYFFCNSWKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP  1285

Range 7: 427 to 504 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.3 bits(121) 0.0 24/26(92%) 0/26(0%) Plus/Minus
Query      801  VCG*LPSSPKLFPCP*SSRTCLLLSQ  878
                VCG*LPSSPKLFPCP*SSRTCL LS+
Subject    427  VCG*LPSSPKLFPCP*SSRTCLDLSR  504

Range 8: 559 to 594 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
32.2 bits(64) 0.0 12/12(100%) 0/12(0%) Plus/Minus
Query      711  P*PSYTAPSMQH  746
                P*PSYTAPSMQH
Subject    559  P*PSYTAPSMQH  594

Range 9: 694 to 1194 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
276.9 bits(598) 0.0 166/167(99%) 0/167(0%) Minus/Plus
Query      111  TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMEYHRNSXXXXXXXXXXXTICSTTTQY*HGI*LDSRRLEXXXXXXXXXXXTSSNYCKRSSYDRCL*IGEKFRNXXXXXXXXXXXYACRLS*VAVAERQTRLSFFQ  611
                TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMEYHRNSFRTR*TAFVRRTICSTTTQY*HGI*LDSRRLETRR*RPITPYTTSSNYCKRSSYDRCL*IGEKFRNIYLLLIIHGGLY CRLS*VAVAERQTRLSFFQ
Subject    694  TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMEYHRNSFRTR*TAFVRRTICSTTTQY*HGI*LDSRRLETRR*RPITPYTTSSNYCKRSSYDRCL*IGEKFRNIYLLLIIHGGLYTCRLS*VAVAERQTRLSFFQ  1194

Range 10: 439 to 642 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
162.4 bits(348) 0.0 68/68(100%) 0/68(0%) Minus/Plus
Query      663  QTSS*RLWARE*LWT*RELPTNRKLLTSQGKYQ*RWQ*RLMLH*WSCVRRLWAPMTQQLRQNSSCT*C  866
                QTSS*RLWARE*LWT*RELPTNRKLLTSQGKYQ*RWQ*RLMLH*WSCVRRLWAPMTQQLRQNSSCT*C
Subject    439  QTSS*RLWARE*LWT*RELPTNRKLLTSQGKYQ*RWQ*RLMLH*WSCVRRLWAPMTQQLRQNSSCT*C  642

Range 11: 1237 to 1302 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.3 bits(75) 0.0 17/22(77%) 0/22(0%) Minus/Plus
Query        3  PR*LYEGLFDTKSRLSRQTHSI  68
                PR*L EGLFDTKSRLSR +  I
Subject   1237  PR*LCEGLFDTKSRLSRYSKLI  1302

Grapevine leafroll associated virus isolate KHCP2 coat protein gene, complete cds

Sequence ID: GQ865602.1 Length: 1428 Number of Matches: 11

Range 1: 653 to 1309 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
483.6 bits(1049) 0.0 213/219(97%) 0/219(0%) Plus/Minus
Query        3  DRVCLAGKSALCIK*ALV*LSGRTYPGGSGGASFADLKER*SCLSFSNRDS*KSTCV*APMNYQ*KVNISKFFTNL*TSIVATSFAIVGRRCVRCYRPLPSCF*TPAV*LNSMLVLRRC*TDRTSDERSLSCTERISVVLHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ  659
                D++ + GKSALCIK*AL *LSGRTYPGGSGGASFADLKER*SCLSFSNRDS*KSTCV*APMNYQ*KVNISKFFTNL*TSIVATSFAIVGRRCVRCYRPLPSCF*TPAV*LNSMLVLRRC*TDRTSDERSLSCTERISVVLHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ
Subject    653  DKLRVLGKSALCIK*ALT*LSGRTYPGGSGGASFADLKER*SCLSFSNRDS*KSTCV*APMNYQ*KVNISKFFTNL*TSIVATSFAIVGRRCVRCYRPLPSCF*TPAV*LNSMLVLRRC*TDRTSDERSLSCTERISVVLHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ  1309

Range 2: 447 to 680 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
182.1 bits(391) 0.0 78/78(100%) 0/78(0%) Plus/Minus
Query      632  EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSINAALIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLS  865
                EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSINAALIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLS
Subject    447  EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSINAALIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLS  680

Range 3: 439 to 1290 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
634.3 bits(1378) 0.0 276/284(97%) 0/284(0%) Plus/Minus
Query       22  ESLLFVSNKPSYNYLGERTREDQEELHSLT*KKDSLVCLSATATHESLHAYKPP*IINKR*IFLNFSPIYRHRSXXXXXXXXEDVV*GVIGRYRLVSKRLLSS*IPC*YCVVVEQIVRRTNAVYRVRKEFRWYSMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLHQCSINLHCHLY*YFPWLVNNFRFVGNSRQVQSYSLAHSLQELVCFY  873
                ESLLFVSNKPS+NYLGER REDQEELHSLT*KKDSLVCLSATATHESLH YKPP*IINKR*IFLNFSPIYRHRS*LLLLQ*LEDVV*GVI RYRLVSKRLLSS*IPC*YCVVVEQIVRRTNAVYRVRKEFRWYSMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLHQC INLHCHLY*YFPWLVNNFRFVGNSRQVQSYSLAHSLQELV  +
Subject    439  ESLLFVSNKPSHNYLGERIREDQEELHSLT*KKDSLVCLSATATHESLHVYKPP*IINKR*IFLNFSPIYRHRS*LLLLQ*LEDVV*GVIARYRLVSKRLLSS*IPC*YCVVVEQIVRRTNAVYRVRKEFRWYSMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLHQCGINLHCHLY*YFPWLVNNFRFVGNSRQVQSYSLAHSLQELVWIF  1290

Range 4: 448 to 1293 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
627.0 bits(1362) 0.0 277/282(98%) 0/282(0%) Minus/Plus
Query       19  DKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADDAATKTKFFLYVMQIACXXXXXXXXXFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQLLQKK*LRSMSINW*KI*KYLPFIDNSWGLIRM*TFMSRGC*KTNKTIFLSSQRMKLLLILPGTFAQIVIRGLI*YKEQTFP  864
                DKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADDAATKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVT DNTLHNVFQLLQKK*LRSMSINW*KI*KYLPFIDNSWGLI M*TFMSRGC*KTNKTIFLSSQRMKLLLILP TFAQIV+ GLI*YKEQTFP
Subject    448  DKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADDAATKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTGDNTLHNVFQLLQKK*LRSMSINW*KI*KYLPFIDNSWGLIHM*TFMSRGC*KTNKTIFLSSQRMKLLLILPDTFAQIVM*GLI*YKEQTFP  1293

Range 5: 438 to 1310 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
622.9 bits(1353) 0.0 283/291(97%) 0/291(0%) Minus/Plus
Query        2  DKSRQVLEDYGQGNSFGLDGSYPQTESY*RARESISRGGNED*CCIDGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWSTTEILSVHXXXXXXXXXXXXXXRNTSMEFS*TAGV*KQDGNGR*HLTQRLPTIAKEVATIDVYKLVKNLEIFTFY**FMGAYTHVDFHESRLLKDKQDYLSFKSANEAPPDPPGYVRPDSYTRAYLIQRADFPAKHTLS  874
                ++SRQVLEDYGQGNSFGLDGSYPQTESY*RARESISRGGNED*C IDGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWSTTEILSVHDRLRSSDVRSVQQRRNTSMEFS*TAGV*KQDGNGR*HLTQRLPTIAKEVATIDVYKLVKNLEIFTFY**FMGAYTHVDFHESRLLKDKQDYLSFKSANEAPPDPPGYVRPDSY RAYLIQRADFP   +LS
Subject    438  ERSRQVLEDYGQGNSFGLDGSYPQTESY*RARESISRGGNED*CRIDGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWSTTEILSVHDRLRSSDVRSVQQRRNTSMEFS*TAGV*KQDGNGR*HLTQRLPTIAKEVATIDVYKLVKNLEIFTFY**FMGAYTHVDFHESRLLKDKQDYLSFKSANEAPPDPPGYVRPDSYVRAYLIQRADFPNTRSLS  1310

Range 6: 720 to 1292 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
447.8 bits(971) 0.0 187/191(98%) 0/191(0%) Plus/Minus
Query       20  GKVCSLYQISPRITIWANVPGRIRRSFIR*LERKIVLFVFQQPRLMKVYMRISPHELSIKGKYF*IFHQFIDIDRSYFFCNSWKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP  592
                GKVCSLYQISP ITIWANV GRIRRSFIR*LERKIVLFVFQQPRLMKVYM ISPHELSIKGKYF*IFHQFIDIDRSYFFCNSWKTLCKVLS VTVLFLNACCLAKFHASIASLLNRSYVGRTQSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP
Subject    720  GKVCSLYQISPHITIWANVSGRIRRSFIR*LERKIVLFVFQQPRLMKVYMCISPHELSIKGKYF*IFHQFIDIDRSYFFCNSWKTLCKVLSPVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP  1292

Range 7: 434 to 511 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.3 bits(121) 0.0 24/26(92%) 0/26(0%) Plus/Minus
Query      801  VCG*LPSSPKLFPCP*SSRTCLLLSQ  878
                VCG*LPSSPKLFPCP*SSRTCL LS+
Subject    434  VCG*LPSSPKLFPCP*SSRTCLDLSR  511

Range 8: 566 to 601 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.4 bits(60) 0.0 11/12(92%) 0/12(0%) Plus/Minus
Query      711  P*PSYTAPSMQH  746
                P*PSYTAPSM+H
Subject    566  P*PSYTAPSMRH  601

Range 9: 701 to 1201 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
276.9 bits(598) 0.0 165/167(99%) 0/167(0%) Minus/Plus
Query      111  TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMEYHRNSXXXXXXXXXXXTICSTTTQY*HGI*LDSRRLEXXXXXXXXXXXTSSNYCKRSSYDRCL*IGEKFRNXXXXXXXXXXXYACRLS*VAVAERQTRLSFFQ  611
                TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMEYHRNSFRTR*TAFVRRTICSTTTQY*HGI*LDSRRLETRR*R ITPYTTSSNYCKRSSYDRCL*IGEKFRNIYLLLIIHGGLY CRLS*VAVAERQTRLSFFQ
Subject    701  TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMEYHRNSFRTR*TAFVRRTICSTTTQY*HGI*LDSRRLETRR*RAITPYTTSSNYCKRSSYDRCL*IGEKFRNIYLLLIIHGGLYTCRLS*VAVAERQTRLSFFQ  1201

Range 10: 446 to 649 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
159.1 bits(341) 0.0 67/68(99%) 0/68(0%) Minus/Plus
Query      663  QTSS*RLWARE*LWT*RELPTNRKLLTSQGKYQ*RWQ*RLMLH*WSCVRRLWAPMTQQLRQNSSCT*C  866
                QTSS*RLWARE*LWT*RELPTNRKLLTSQGKYQ*RWQ*RLM H*WSCVRRLWAPMTQQLRQNSSCT*C
Subject    446  QTSS*RLWARE*LWT*RELPTNRKLLTSQGKYQ*RWQ*RLMPH*WSCVRRLWAPMTQQLRQNSSCT*C  649

Range 11: 1244 to 1309 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.4 bits(71) 0.0 16/22(73%) 0/22(0%) Minus/Plus
Query        3  PR*LYEGLFDTKSRLSRQTHSI  68
                PR*L EGLFDTKSRLS+ +  I
Subject   1244  PR*LCEGLFDTKSRLSQYSKLI  1309

Grapevine leafroll associated virus 3 isolate 6 114 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130303.1 Length: 4711 Number of Matches: 11

Range 1: 646 to 1302 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
483.1 bits(1048) 0.0 213/219(97%) 0/219(0%) Plus/Minus
Query        3  DRVCLAGKSALCIK*ALV*LSGRTYPGGSGGASFADLKER*SCLSFSNRDS*KSTCV*APMNYQ*KVNISKFFTNL*TSIVATSFAIVGRRCVRCYRPLPSCF*TPAV*LNSMLVLRRC*TDRTSDERSLSCTERISVVLHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ  659
                D++ + GKSALCIK*AL *LSGRTYPGGSGGASFADLKER*SCLSFSNRDS*KSTCV*APMNYQ*KVNISKFFTNL*TSIVATSFAIVGRRCVRCYRPLPSCF*TPAV*LNSMLVLRRC*TDRTSDERSLSCTERISVVLHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ
Subject    646  DKL*VLGKSALCIK*ALT*LSGRTYPGGSGGASFADLKER*SCLSFSNRDS*KSTCV*APMNYQ*KVNISKFFTNL*TSIVATSFAIVGRRCVRCYRPLPSCF*TPAV*LNSMLVLRRC*TDRTSDERSLSCTERISVVLHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ  1302

Range 2: 440 to 673 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
182.1 bits(391) 0.0 78/78(100%) 0/78(0%) Plus/Minus
Query      632  EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSINAALIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLS  865
                EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSINAALIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLS
Subject    440  EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSINAALIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLS  673

Range 3: 432 to 1283 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
631.6 bits(1372) 0.0 276/284(97%) 0/284(0%) Plus/Minus
Query       22  ESLLFVSNKPSYNYLGERTREDQEELHSLT*KKDSLVCLSATATHESLHAYKPP*IINKR*IFLNFSPIYRHRSXXXXXXXXEDVV*GVIGRYRLVSKRLLSS*IPC*YCVVVEQIVRRTNAVYRVRKEFRWYSMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLHQCSINLHCHLY*YFPWLVNNFRFVGNSRQVQSYSLAHSLQELVCFY  873
                ESLLFVSNKPS+NYLGER REDQEELHSLT*KKDSLVCLSATATHESLH YKPP*IINKR*IFLNFSPIYRHRS*LLLLQ*LEDVV*GVIGRYRLVSKRLLSS*IPC*YCVVVEQIVRRTNAVYRVRKEFRWYSMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLHQC INLH HLY*YFPWLVNNFRFVGNSRQVQSYSLAHSLQELV  +
Subject    432  ESLLFVSNKPSHNYLGERIREDQEELHSLT*KKDSLVCLSATATHESLHVYKPP*IINKR*IFLNFSPIYRHRS*LLLLQ*LEDVV*GVIGRYRLVSKRLLSS*IPC*YCVVVEQIVRRTNAVYRVRKEFRWYSMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLHQCGINLHRHLY*YFPWLVNNFRFVGNSRQVQSYSLAHSLQELVWIF  1283

Range 4: 441 to 1286 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
628.8 bits(1366) 0.0 278/282(99%) 0/282(0%) Minus/Plus
Query       19  DKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADDAATKTKFFLYVMQIACXXXXXXXXXFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQLLQKK*LRSMSINW*KI*KYLPFIDNSWGLIRM*TFMSRGC*KTNKTIFLSSQRMKLLLILPGTFAQIVIRGLI*YKEQTFP  864
                DKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADDAATKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQLLQKK*LRSMSINW*KI*KYLPFIDNSWGLI M*TFMSRGC*KTNKTIFLSSQRMKLLLILP TFAQIV+ GLI*YKEQTFP
Subject    441  DKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADDAATKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQLLQKK*LRSMSINW*KI*KYLPFIDNSWGLIHM*TFMSRGC*KTNKTIFLSSQRMKLLLILPDTFAQIVM*GLI*YKEQTFP  1286

Range 5: 431 to 1303 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
620.6 bits(1348) 0.0 282/291(97%) 0/291(0%) Minus/Plus
Query        2  DKSRQVLEDYGQGNSFGLDGSYPQTESY*RARESISRGGNED*CCIDGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWSTTEILSVHXXXXXXXXXXXXXXRNTSMEFS*TAGV*KQDGNGR*HLTQRLPTIAKEVATIDVYKLVKNLEIFTFY**FMGAYTHVDFHESRLLKDKQDYLSFKSANEAPPDPPGYVRPDSYTRAYLIQRADFPAKHTLS  874
                ++SRQVLEDYGQGNSFGLDGSYPQTESY*RARESISRGG+ED*C IDGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWSTTEILSVHDRLRSSDVRSVQQRRNTSMEFS*TAGV*KQDGNGR*HLTQRLPTIAKEVATIDVYKLVKNLEIFTFY**FMGAYTHVDFHESRLLKDKQDYLSFKSANEAPPDPPGYVRPDSY RAYLIQRADFP   +LS
Subject    431  ERSRQVLEDYGQGNSFGLDGSYPQTESY*RARESISRGGDED*CRIDGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWSTTEILSVHDRLRSSDVRSVQQRRNTSMEFS*TAGV*KQDGNGR*HLTQRLPTIAKEVATIDVYKLVKNLEIFTFY**FMGAYTHVDFHESRLLKDKQDYLSFKSANEAPPDPPGYVRPDSYVRAYLIQRADFPNTQSLS  1303

Range 6: 713 to 1285 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
450.1 bits(976) 0.0 188/191(98%) 0/191(0%) Plus/Minus
Query       20  GKVCSLYQISPRITIWANVPGRIRRSFIR*LERKIVLFVFQQPRLMKVYMRISPHELSIKGKYF*IFHQFIDIDRSYFFCNSWKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP  592
                GKVCSLYQISP ITIWANV GRIRRSFIR*LERKIVLFVFQQPRLMKVYM ISPHELSIKGKYF*IFHQFIDIDRSYFFCNSWKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP
Subject    713  GKVCSLYQISPHITIWANVSGRIRRSFIR*LERKIVLFVFQQPRLMKVYMCISPHELSIKGKYF*IFHQFIDIDRSYFFCNSWKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP  1285

Range 7: 427 to 504 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.3 bits(121) 0.0 24/26(92%) 0/26(0%) Plus/Minus
Query      801  VCG*LPSSPKLFPCP*SSRTCLLLSQ  878
                VCG*LPSSPKLFPCP*SSRTCL LS+
Subject    427  VCG*LPSSPKLFPCP*SSRTCLDLSR  504

Range 8: 559 to 594 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.4 bits(60) 0.0 11/12(92%) 0/12(0%) Plus/Minus
Query      711  P*PSYTAPSMQH  746
                P*PSYTAPSM+H
Subject    559  P*PSYTAPSMRH  594

Range 9: 694 to 1194 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
276.9 bits(598) 0.0 166/167(99%) 0/167(0%) Minus/Plus
Query      111  TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMEYHRNSXXXXXXXXXXXTICSTTTQY*HGI*LDSRRLEXXXXXXXXXXXTSSNYCKRSSYDRCL*IGEKFRNXXXXXXXXXXXYACRLS*VAVAERQTRLSFFQ  611
                TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMEYHRNSFRTR*TAFVRRTICSTTTQY*HGI*LDSRRLETRR*RPITPYTTSSNYCKRSSYDRCL*IGEKFRNIYLLLIIHGGLY CRLS*VAVAERQTRLSFFQ
Subject    694  TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMEYHRNSFRTR*TAFVRRTICSTTTQY*HGI*LDSRRLETRR*RPITPYTTSSNYCKRSSYDRCL*IGEKFRNIYLLLIIHGGLYTCRLS*VAVAERQTRLSFFQ  1194

Range 10: 439 to 642 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
157.3 bits(337) 0.0 66/68(97%) 0/68(0%) Minus/Plus
Query      663  QTSS*RLWARE*LWT*RELPTNRKLLTSQGKYQ*RWQ*RLMLH*WSCVRRLWAPMTQQLRQNSSCT*C  866
                QTSS*RLWARE*LWT*RELPTNRKLLTSQGKYQ*RW+*RLM H*WSCVRRLWAPMTQQLRQNSSCT*C
Subject    439  QTSS*RLWARE*LWT*RELPTNRKLLTSQGKYQ*RWR*RLMPH*WSCVRRLWAPMTQQLRQNSSCT*C  642

Range 11: 1237 to 1302 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.4 bits(71) 0.0 16/22(73%) 0/22(0%) Minus/Plus
Query        3  PR*LYEGLFDTKSRLSRQTHSI  68
                PR*L EGLFDTKSRLS+ +  I
Subject   1237  PR*LCEGLFDTKSRLSQYSKLI  1302

Grapevine leafroll associated virus 3 isolate 6 18 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130300.1 Length: 4711 Number of Matches: 11

Range 1: 646 to 1302 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
483.1 bits(1048) 0.0 213/219(97%) 0/219(0%) Plus/Minus
Query        3  DRVCLAGKSALCIK*ALV*LSGRTYPGGSGGASFADLKER*SCLSFSNRDS*KSTCV*APMNYQ*KVNISKFFTNL*TSIVATSFAIVGRRCVRCYRPLPSCF*TPAV*LNSMLVLRRC*TDRTSDERSLSCTERISVVLHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ  659
                D++ + GKSALCIK*AL *LSGRTYPGGSGGASFADLKER*SCLSFSNRDS*KSTCV*APMNYQ*KVNISKFFTNL*TSIVATSFAIVGRRCVRCYRPLPSCF*TPAV*LNSMLVLRRC*TDRTSDERSLSCTERISVVLHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ
Subject    646  DKL*VPGKSALCIK*ALT*LSGRTYPGGSGGASFADLKER*SCLSFSNRDS*KSTCV*APMNYQ*KVNISKFFTNL*TSIVATSFAIVGRRCVRCYRPLPSCF*TPAV*LNSMLVLRRC*TDRTSDERSLSCTERISVVLHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ  1302

Range 2: 440 to 673 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
181.6 bits(390) 0.0 77/78(99%) 0/78(0%) Plus/Minus
Query      632  EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSINAALIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLS  865
                EDDVKNVQAICITYKKNFVL+AASSAPITFLHSSINAALIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLS
Subject    440  EDDVKNVQAICITYKKNFVLIAASSAPITFLHSSINAALIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLS  673

Range 3: 432 to 1289 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
633.9 bits(1377) 0.0 276/286(97%) 0/286(0%) Plus/Minus
Query       16  WRESLLFVSNKPSYNYLGERTREDQEELHSLT*KKDSLVCLSATATHESLHAYKPP*IINKR*IFLNFSPIYRHRSXXXXXXXXEDVV*GVIGRYRLVSKRLLSS*IPC*YCVVVEQIVRRTNAVYRVRKEFRWYSMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLHQCSINLHCHLY*YFPWLVNNFRFVGNSRQVQSYSLAHSLQELVCFY  873
                +RESLLFVSNKPS+NYLGER REDQEELHSLT*KKDSLVCLSATATHESLH YKPP*IINKR*IFLNFSPIYR RS*LLLLQ*LEDVV*GVIGRYRLVSKRLLSS*IPC*YCVVVEQIVRRTNAVYRVRKEFRWYSMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCL+CCVIGAHNLLTQLHQC INLHCHLY*YFPWLVNNFRFVGNSRQVQSYSLAHSLQELV  +
Subject    432  YRESLLFVSNKPSHNYLGERIREDQEELHSLT*KKDSLVCLSATATHESLHVYKPP*IINKR*IFLNFSPIYRLRS*LLLLQ*LEDVV*GVIGRYRLVSKRLLSS*IPC*YCVVVEQIVRRTNAVYRVRKEFRWYSMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLNCCVIGAHNLLTQLHQCGINLHCHLY*YFPWLVNNFRFVGNSRQVQSYSLAHSLQELVWIF  1289

Range 4: 441 to 1304 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
623.8 bits(1355) 0.0 277/288(96%) 0/288(0%) Minus/Plus
Query        1  DKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADDAATKTKFFLYVMQIACXXXXXXXXXFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQLLQKK*LRSMSINW*KI*KYLPFIDNSWGLIRM*TFMSRGC*KTNKTIFLSSQRMKLLLILPGTFAQIVIRGLI*YKEQTFPPNTLYR  864
                DKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADDAA KTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQLLQKK*LRS SINW*KI*KYLPFIDNSWGLI M*TFMSRGC*KTNKTIFLSSQRMKLLLILP TFAQIV+ GLI*YKEQTFP    Y+
Subject    441  DKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADDAAIKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQLLQKK*LRSKSINW*KI*KYLPFIDNSWGLIHM*TFMSRGC*KTNKTIFLSSQRMKLLLILPDTFAQIVM*GLI*YKEQTFPVLKAYQ  1304

Range 5: 431 to 1303 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
621.9 bits(1351) 0.0 282/291(97%) 0/291(0%) Minus/Plus
Query        2  DKSRQVLEDYGQGNSFGLDGSYPQTESY*RARESISRGGNED*CCIDGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWSTTEILSVHXXXXXXXXXXXXXXRNTSMEFS*TAGV*KQDGNGR*HLTQRLPTIAKEVATIDVYKLVKNLEIFTFY**FMGAYTHVDFHESRLLKDKQDYLSFKSANEAPPDPPGYVRPDSYTRAYLIQRADFPAKHTLS  874
                ++SRQVLEDYGQGNSFGLDGSYPQTESY*RARESISRGGNED*C IDGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWSTTEILSVHDRLRSSDVRSVQQRRNTSMEFS*TAGV*KQDGNGR*HLTQRLPTIAKEVATI+VYKLVKNLEIFTFY**FMGAYTHVDFHESRLLKDKQDYLSFKSANEAPPDPPGYVRPDSY RAYLIQRADFP   +LS
Subject    431  ERSRQVLEDYGQGNSFGLDGSYPQTESY*RARESISRGGNED*CRIDGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWSTTEILSVHDRLRSSDVRSVQQRRNTSMEFS*TAGV*KQDGNGR*HLTQRLPTIAKEVATIEVYKLVKNLEIFTFY**FMGAYTHVDFHESRLLKDKQDYLSFKSANEAPPDPPGYVRPDSYVRAYLIQRADFPGTQSLS  1303

Range 6: 713 to 1285 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
448.3 bits(972) 0.0 187/191(98%) 0/191(0%) Plus/Minus
Query       20  GKVCSLYQISPRITIWANVPGRIRRSFIR*LERKIVLFVFQQPRLMKVYMRISPHELSIKGKYF*IFHQFIDIDRSYFFCNSWKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP  592
                GKVCSLYQISP ITIWANV GRIRRSFIR*LERKIVLFVFQQPRLMKVYM ISPHELSIKGKYF*IFHQFID DRSYFFCNSWKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP
Subject    713  GKVCSLYQISPHITIWANVSGRIRRSFIR*LERKIVLFVFQQPRLMKVYMCISPHELSIKGKYF*IFHQFIDFDRSYFFCNSWKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP  1285

Range 7: 427 to 504 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.3 bits(121) 0.0 24/26(92%) 0/26(0%) Plus/Minus
Query      801  VCG*LPSSPKLFPCP*SSRTCLLLSQ  878
                VCG*LPSSPKLFPCP*SSRTCL LS+
Subject    427  VCG*LPSSPKLFPCP*SSRTCLDLSR  504

Range 8: 559 to 594 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.4 bits(60) 0.0 11/12(92%) 0/12(0%) Plus/Minus
Query      711  P*PSYTAPSMQH  746
                P*PSYTAPSM+H
Subject    559  P*PSYTAPSMRH  594

Range 9: 694 to 1194 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
272.3 bits(588) 0.0 165/167(99%) 0/167(0%) Minus/Plus
Query      111  TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMEYHRNSXXXXXXXXXXXTICSTTTQY*HGI*LDSRRLEXXXXXXXXXXXTSSNYCKRSSYDRCL*IGEKFRNXXXXXXXXXXXYACRLS*VAVAERQTRLSFFQ  611
                TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMEYHRNSFRTR*TAFVRRTICSTTTQY*HGI*LDSRRLETRR*RPITPYTTSSNYCKRSSYDR L*IGEKFRNIYLLLIIHGGLY CRLS*VAVAERQTRLSFFQ
Subject    694  TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMEYHRNSFRTR*TAFVRRTICSTTTQY*HGI*LDSRRLETRR*RPITPYTTSSNYCKRSSYDRSL*IGEKFRNIYLLLIIHGGLYTCRLS*VAVAERQTRLSFFQ  1194

Range 10: 439 to 642 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
159.1 bits(341) 0.0 67/68(99%) 0/68(0%) Minus/Plus
Query      663  QTSS*RLWARE*LWT*RELPTNRKLLTSQGKYQ*RWQ*RLMLH*WSCVRRLWAPMTQQLRQNSSCT*C  866
                QTSS*RLWARE*LWT*RELPTNRKLLTSQGKYQ*RWQ*RLM H*WSCVRRLWAPMTQQLRQNSSCT*C
Subject    439  QTSS*RLWARE*LWT*RELPTNRKLLTSQGKYQ*RWQ*RLMPH*WSCVRRLWAPMTQQLRQNSSCT*C  642

Range 11: 1237 to 1302 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.3 bits(75) 0.0 17/22(77%) 0/22(0%) Minus/Plus
Query        3  PR*LYEGLFDTKSRLSRQTHSI  68
                PR*L EGLFDTKSRLSR +  I
Subject   1237  PR*LCEGLFDTKSRLSRYSKLI  1302

Nucleotide Sequence (1057 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
106
212
318
424
530
636
742
848
954
1057

Descriptions

Alignments

Grapevine leafroll associated virus 3 isolate 3138 07, complete genome

Sequence ID: JX559645.1 Length: 18498 Number of Matches: 21

Range 1: 10253 to 10945 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
536.3 bits(1164) 0.0 230/231(100%) 0/231(0%) Minus/Plus
Query      247  *VYFLSLVLSYMTLRQNYEFSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC*AKVVS*FYIEVGVFVYGRF*TGNTVASSRFCLCDNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIWGQRLYSCGR*CLR*NPNFYT*R*QYLLNW*SCGESLS*RCRGKVVC*PEKVGRCDEG*RRTLRREIKTYIHRED  939
                *VYFLSLVLSYMTLRQNYEFSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC*AKVVS*FYIEVGVFVYGRF*TGNTVASSRFCLCDNSVAGSYVCRPE+TAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIWGQRLYSCGR*CLR*NPNFYT*R*QYLLNW*SCGESLS*RCRGKVVC*PEKVGRCDEG*RRTLRREIKTYIHRED
Subject  10253  *VYFLSLVLSYMTLRQNYEFSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC*AKVVS*FYIEVGVFVYGRF*TGNTVASSRFCLCDNSVAGSYVCRPEITAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIWGQRLYSCGR*CLR*NPNFYT*R*QYLLNW*SCGESLS*RCRGKVVC*PEKVGRCDEG*RRTLRREIKTYIHRED  10945

Range 2: 10994 to 11191 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
153.7 bits(329) 0.0 65/66(98%) 0/66(0%) Minus/Plus
Query        1  HLIEGR*RNMFILESLDTGVRKVYVYDGYSSCCNGTG*L*LL*TKLRC*GAKRSWYTG*RCC*RTD  198
                HLIEGR*RNMFILESLDTGVRKVYVYDGYSSCCNGT *L*LL*TKLRC*GAKRSWYTG*RCC*RTD
Subject  10994  HLIEGR*RNMFILESLDTGVRKVYVYDGYSSCCNGTS*L*LL*TKLRC*GAKRSWYTG*RCC*RTD  11191

Range 3: 10135 to 10206 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.7 bits(124) 0.0 24/24(100%) 0/24(0%) Minus/Plus
Query      986  YYVGYFGATPKVFPLCV*PLM*VS  1057
                YYVGYFGATPKVFPLCV*PLM*VS
Subject  10135  YYVGYFGATPKVFPLCV*PLM*VS  10206

Range 4: 10353 to 11189 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
617.8 bits(1342) 0.0 277/279(99%) 0/279(0%) Plus/Minus
Query        3  RFVNNTSNRYTKTF*RLNNEASFKGVIVXXXXXXXXXXXXXXIPFALQYQGSQE*TYYVNDPQ*GVWSGT*TSN**GASAVYLHGVCRF*FLDVTFDVIPRHTYPPFRVNIQPSLYTVTISFPRSFTN*VSTATFRYKNLGFNVNTTGHRSTTADPRWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYHKDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLSTKIIRVAPSPISLLRRTRSIPISRKNLFMSPLNLV  839
                RFVNNTSNRYTKTF*RLNNEASFKGVIVS YRYNSCCNRRRRIPFALQYQGSQE*TYYVNDPQ*GVWSGT*TSN**GASAVYLHGVCRF*FLDVTFDVIPRHTYPPFRVNIQPSLYTVTISFPRSFTN*VSTATFRYKNLGFNVNTTGHRSTTADPRWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL* RDDKRKNQQQNYHKDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLSTKIIRVAPSPISLLRRTRSIPISRKNLFMSPLNLV
Subject  10353  RFVNNTSNRYTKTF*RLNNEASFKGVIVSWYRYNSCCNRRRRIPFALQYQGSQE*TYYVNDPQ*GVWSGT*TSN**GASAVYLHGVCRF*FLDVTFDVIPRHTYPPFRVNIQPSLYTVTISFPRSFTN*VSTATFRYKNLGFNVNTTGHRSTTADPRWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*SRDDKRKNQQQNYHKDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLSTKIIRVAPSPISLLRRTRSIPISRKNLFMSPLNLV  11189

Range 5: 10135 to 10209 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.6 bits(128) 0.0 24/25(96%) 0/25(0%) Plus/Minus
Query      983  QRNLH*RLHTKRKNLWRSAKITYVI  1057
                QRNLH*RLHTKRKNLWRSAK+TYVI
Subject  10135  QRNLH*RLHTKRKNLWRSAKVTYVI  10209

Range 6: 10272 to 10313 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.3 bits(73) 0.0 14/14(100%) 0/14(0%) Plus/Minus
Query      879  KIHNFDVASYTTTL  920
                KIHNFDVASYTTTL
Subject  10272  KIHNFDVASYTTTL  10313

Range 7: 10580 to 11191 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
403.8 bits(875) 0.0 204/204(100%) 0/204(0%) Plus/Minus
Query        1  VGSLTTPLTGIPRPFSASTTKLRLKEL*SAGXXXXXXXXXXDVYLSHSSIKALKNKHITSTTLNKVSGXXXXXXXXXXXXLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPSTPSR*AFPAALPIK*VLLPSGIKIWVST*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR  612
                VGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPSTPSR*AFPAALPIK*VLLPSGIKIWVST*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR
Subject  10580  VGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPSTPSR*AFPAALPIK*VLLPSGIKIWVST*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR  11191

Range 8: 10238 to 10528 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
223.8 bits(482) 0.0 96/97(99%) 0/97(0%) Plus/Minus
Query      664  ACLKSSINKYAYFNIKSRYYLRSARRSFAWRLPRFLF*GELVLSQSRAKTYLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH*GKKINLDRRKE  954
                ACLKSSINKYAYFNIKSRYYLRSARRSFAWRLPRFLF*GELVLSQSRAKTYLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH*GKKINL+RRKE
Subject  10238  ACLKSSINKYAYFNIKSRYYLRSARRSFAWRLPRFLF*GELVLSQSRAKTYLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH*GKKINLNRRKE  10528

Range 9: 10137 to 10205 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.1 bits(116) 0.0 23/23(100%) 0/23(0%) Plus/Minus
Query      987  ETYIKGYTQRGKTFGVAPK*PT*  1055
                ETYIKGYTQRGKTFGVAPK*PT*
Subject  10137  ETYIKGYTQRGKTFGVAPK*PT*  10205

Range 10: 10596 to 11189 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
402.5 bits(872) 0.0 198/198(100%) 0/198(0%) Minus/Plus
Query        3  PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVETQIFIPEGSSTYLIGKAAGKAYRDGVEGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDXXXXXXXXXXXXGPDTLLRVVDVICLFLRALILECERYTSXXXXXXXXXVPADYNSFKRSFVVEALKGLGIPVRGVVNEP  596
                PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVETQIFIPEGSSTYLIGKAAGKAYRDGVEGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEP
Subject  10596  PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVETQIFIPEGSSTYLIGKAAGKAYRDGVEGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEP  11189

Range 11: 10269 to 10529 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
204.1 bits(439) 0.0 87/87(100%) 0/87(0%) Minus/Plus
Query      663  P*CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*VFARDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*AYLFMDDFKQA  923
                P*CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*VFARDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*AYLFMDDFKQA
Subject  10269  P*CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*VFARDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*AYLFMDDFKQA  10529

Range 12: 10137 to 10202 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.7 bits(113) 0.0 21/22(95%) 0/22(0%) Minus/Plus
Query      990  LRRLFWRYAKGFSSLCVAFNVG  1055
                LRRL WRYAKGFSSLCVAFNVG
Subject  10137  LRRLLWRYAKGFSSLCVAFNVG  10202

Range 13: 10528 to 10932 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
318.6 bits(689) 0.0 134/135(99%) 0/135(0%) Plus/Minus
Query      260  M*VLISRRNVRRYPSSHLPTFSG*HTTFPLHRHDKLSPQLYQLSKYCYLQV*KFGFQRKHYRPQEYNR*PQMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELSQRQNRLLATVL  664
                M*VLISRRNVRRYPSSHLPTFSG*HTTFPLHRHDKLSPQLYQLSKYCYLQV*KFGFQRKHYRPQEYNR*PQMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAV SGRQT*EPATELSQRQNRLLATVL
Subject  10528  M*VLISRRNVRRYPSSHLPTFSG*HTTFPLHRHDKLSPQLYQLSKYCYLQV*KFGFQRKHYRPQEYNR*PQMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVISGRQT*EPATELSQRQNRLLATVL  10932

Range 14: 10276 to 10479 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
166.5 bits(357) 0.0 68/68(100%) 0/68(0%) Plus/Minus
Query      713  HDTTFAQHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKENS*F*RSVIYDN  916
                HDTTFAQHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKENS*F*RSVIYDN
Subject  10276  HDTTFAQHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKENS*F*RSVIYDN  10479

Range 15: 10993 to 11067 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.6 bits(128) 0.0 25/25(100%) 0/25(0%) Plus/Minus
Query      125  TYTFRTPVSRLSRINILRQRPSIRC  199
                TYTFRTPVSRLSRINILRQRPSIRC
Subject  10993  TYTFRTPVSRLSRINILRQRPSIRC  11067

Range 16: 11116 to 11190 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.6 bits(115) 0.0 25/25(100%) 0/25(0%) Plus/Minus
Query        2  SVR*QHL*PVYQDLLAPQQRSFV*R  76
                SVR*QHL*PVYQDLLAPQQRSFV*R
Subject  11116  SVR*QHL*PVYQDLLAPQQRSFV*R  11190

Range 17: 10136 to 10183 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.7 bits(76) 0.0 15/16(94%) 0/16(0%) Plus/Minus
Query     1009  HKEEKPLA*RQNNLRN  1056
                HKEEKPLA*RQ+NLRN
Subject  10136  HKEEKPLA*RQSNLRN  10183

Range 18: 10288 to 10776 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
371.3 bits(804) 0.0 162/163(99%) 0/163(0%) Minus/Plus
Query      416  DATSKL*IFLRVGVVECVHRR*TRFSGDINRFLREIGIERVRLKREIGEGATRMIFVLSEGSIVILY*SRRICLWTILNRQYCC**SILSL**FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLKPKF  904
                DATSKL*IFLRVGVVECVHRR*TRFSGDINRFLREIGIERVRLKREIGEGATRMIFVLSEGSIVILY*SRRICLWTILNRQYCC**SILSL**FCCWFLRLSSR YSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLKPKF
Subject  10288  DATSKL*IFLRVGVVECVHRR*TRFSGDINRFLREIGIERVRLKREIGEGATRMIFVLSEGSIVILY*SRRICLWTILNRQYCC**SILSL**FCCWFLRLSSRDYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLKPKF  10776

Range 19: 10819 to 11064 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
178.4 bits(383) 0.0 82/82(100%) 0/82(0%) Minus/Plus
Query      128  RGKLIVTV*REGCMLTRKGG*V*RGITSNVTSRN*NLHTP*R*TAEAPY*LEV*VPDQTPY*GSLT*YVYS*EP*YWSAKGI  373
                RGKLIVTV*REGCMLTRKGG*V*RGITSNVTSRN*NLHTP*R*TAEAPY*LEV*VPDQTPY*GSLT*YVYS*EP*YWSAKGI
Subject  10819  RGKLIVTV*REGCMLTRKGG*V*RGITSNVTSRN*NLHTP*R*TAEAPY*LEV*VPDQTPY*GSLT*YVYS*EP*YWSAKGI  11064

Range 20: 10136 to 10189 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
39.1 bits(79) 0.0 17/18(94%) 0/18(0%) Minus/Plus
Query     1003  IT*VILALRQRFFLFVCS  1056
                IT*V LALRQRFFLFVCS
Subject  10136  IT*VTLALRQRFFLFVCS  10189

Range 21: 11107 to 11133 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.1 bits(44) 0.0 9/9(100%) 0/9(0%) Minus/Plus
Query       59  TITPLNEAS  85
                TITPLNEAS
Subject  11107  TITPLNEAS  11133

Grapevine leafroll associated virus 3 isolate 621, complete genome

Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 21

Range 1: 10253 to 10945 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
536.3 bits(1164) 0.0 230/231(100%) 0/231(0%) Minus/Plus
Query      247  *VYFLSLVLSYMTLRQNYEFSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC*AKVVS*FYIEVGVFVYGRF*TGNTVASSRFCLCDNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIWGQRLYSCGR*CLR*NPNFYT*R*QYLLNW*SCGESLS*RCRGKVVC*PEKVGRCDEG*RRTLRREIKTYIHRED  939
                *VYFLSLVLSYMTLRQNYEFSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC*AKVVS*FYIEVGVFVYGRF*TGNTVASSRFCLCDNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIWGQRLYSCGR*CLR*NPNFYT*R*QYLLNW*SCGESLS*RCRGKVVC*PEKVGRCDEG*RRTLRREIKTY+HRED
Subject  10253  *VYFLSLVLSYMTLRQNYEFSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC*AKVVS*FYIEVGVFVYGRF*TGNTVASSRFCLCDNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIWGQRLYSCGR*CLR*NPNFYT*R*QYLLNW*SCGESLS*RCRGKVVC*PEKVGRCDEG*RRTLRREIKTYVHRED  10945

Range 2: 10994 to 11191 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
153.7 bits(329) 0.0 65/66(98%) 0/66(0%) Minus/Plus
Query        1  HLIEGR*RNMFILESLDTGVRKVYVYDGYSSCCNGTG*L*LL*TKLRC*GAKRSWYTG*RCC*RTD  198
                HLIEGR*RNMFILESLDTGVRKVYVYDGYSSCCNGT *L*LL*TKLRC*GAKRSWYTG*RCC*RTD
Subject  10994  HLIEGR*RNMFILESLDTGVRKVYVYDGYSSCCNGTS*L*LL*TKLRC*GAKRSWYTG*RCC*RTD  11191

Range 3: 10135 to 10206 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.7 bits(124) 0.0 24/24(100%) 0/24(0%) Minus/Plus
Query      986  YYVGYFGATPKVFPLCV*PLM*VS  1057
                YYVGYFGATPKVFPLCV*PLM*VS
Subject  10135  YYVGYFGATPKVFPLCV*PLM*VS  10206

Range 4: 10353 to 11189 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
616.0 bits(1338) 0.0 277/279(99%) 0/279(0%) Plus/Minus
Query        3  RFVNNTSNRYTKTF*RLNNEASFKGVIVXXXXXXXXXXXXXXIPFALQYQGSQE*TYYVNDPQ*GVWSGT*TSN**GASAVYLHGVCRF*FLDVTFDVIPRHTYPPFRVNIQPSLYTVTISFPRSFTN*VSTATFRYKNLGFNVNTTGHRSTTADPRWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYHKDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLSTKIIRVAPSPISLLRRTRSIPISRKNLFMSPLNLV  839
                RFVNNTSNRYTKTF*RLNNEASFKGVIVS YRYNSCCNRRRRIPFALQYQGSQE*TYYVNDPQ*GVWSGT*TSN**GASAVYLHGV RF*FLDVTFDVIPRHTYPPFRVNIQPSLYTVTISFPRSFTN*VSTATFRYKNLGFNVNTTGHRSTTADPRWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYHKDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLSTKIIRVAPSPISLLRRTRSIPISRKNLFMSPLNLV
Subject  10353  RFVNNTSNRYTKTF*RLNNEASFKGVIVSWYRYNSCCNRRRRIPFALQYQGSQE*TYYVNDPQ*GVWSGT*TSN**GASAVYLHGVRRF*FLDVTFDVIPRHTYPPFRVNIQPSLYTVTISFPRSFTN*VSTATFRYKNLGFNVNTTGHRSTTADPRWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYHKDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLSTKIIRVAPSPISLLRRTRSIPISRKNLFMSPLNLV  11189

Range 5: 10135 to 10209 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.6 bits(128) 0.0 24/25(96%) 0/25(0%) Plus/Minus
Query      983  QRNLH*RLHTKRKNLWRSAKITYVI  1057
                QRNLH*RLHTKRKNLWRSAK+TYVI
Subject  10135  QRNLH*RLHTKRKNLWRSAKVTYVI  10209

Range 6: 10272 to 10313 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
32.2 bits(64) 0.0 13/14(93%) 0/14(0%) Plus/Minus
Query      879  KIHNFDVASYTTTL  920
                KIHNFDVAS TTTL
Subject  10272  KIHNFDVASCTTTL  10313

Range 7: 10580 to 11191 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
403.8 bits(875) 0.0 204/204(100%) 0/204(0%) Plus/Minus
Query        1  VGSLTTPLTGIPRPFSASTTKLRLKEL*SAGXXXXXXXXXXDVYLSHSSIKALKNKHITSTTLNKVSGXXXXXXXXXXXXLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPSTPSR*AFPAALPIK*VLLPSGIKIWVST*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR  612
                VGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPSTPSR*AFPAALPIK*VLLPSGIKIWVST*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR
Subject  10580  VGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPSTPSR*AFPAALPIK*VLLPSGIKIWVST*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR  11191

Range 8: 10238 to 10528 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
223.3 bits(481) 0.0 95/97(98%) 0/97(0%) Plus/Minus
Query      664  ACLKSSINKYAYFNIKSRYYLRSARRSFAWRLPRFLF*GELVLSQSRAKTYLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH*GKKINLDRRKE  954
                ACLKSSINKYAYFNIKSRYYLRSARRSFAWRLPRFLF*GELVLSQSRAKTYLCRH*TSSSADERTQRRLHEGKFIILT*RH+RQH*GKKINL+RRKE
Subject  10238  ACLKSSINKYAYFNIKSRYYLRSARRSFAWRLPRFLF*GELVLSQSRAKTYLCRH*TSSSADERTQRRLHEGKFIILT*RHVRQH*GKKINLNRRKE  10528

Range 9: 10137 to 10205 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.1 bits(116) 0.0 23/23(100%) 0/23(0%) Plus/Minus
Query      987  ETYIKGYTQRGKTFGVAPK*PT*  1055
                ETYIKGYTQRGKTFGVAPK*PT*
Subject  10137  ETYIKGYTQRGKTFGVAPK*PT*  10205

Range 10: 10596 to 11189 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
402.5 bits(872) 0.0 198/198(100%) 0/198(0%) Minus/Plus
Query        3  PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVETQIFIPEGSSTYLIGKAAGKAYRDGVEGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDXXXXXXXXXXXXGPDTLLRVVDVICLFLRALILECERYTSXXXXXXXXXVPADYNSFKRSFVVEALKGLGIPVRGVVNEP  596
                PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVETQIFIPEGSSTYLIGKAAGKAYRDGVEGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEP
Subject  10596  PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVETQIFIPEGSSTYLIGKAAGKAYRDGVEGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEP  11189

Range 11: 10269 to 10529 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
201.8 bits(434) 0.0 86/87(99%) 0/87(0%) Minus/Plus
Query      663  P*CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*VFARDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*AYLFMDDFKQA  923
                P*CCR *RYVKIMNFPSCRRR*VRSSALDEV*WRHK*VFARDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*AYLFMDDFKQA
Subject  10269  P*CCRT*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*VFARDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*AYLFMDDFKQA  10529

Range 12: 10137 to 10202 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.7 bits(113) 0.0 21/22(95%) 0/22(0%) Minus/Plus
Query      990  LRRLFWRYAKGFSSLCVAFNVG  1055
                LRRL WRYAKGFSSLCVAFNVG
Subject  10137  LRRLLWRYAKGFSSLCVAFNVG  10202

Range 13: 10528 to 10929 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
319.1 bits(690) 0.0 134/134(100%) 0/134(0%) Plus/Minus
Query      263  *VLISRRNVRRYPSSHLPTFSG*HTTFPLHRHDKLSPQLYQLSKYCYLQV*KFGFQRKHYRPQEYNR*PQMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELSQRQNRLLATVL  664
                *VLISRRNVRRYPSSHLPTFSG*HTTFPLHRHDKLSPQLYQLSKYCYLQV*KFGFQRKHYRPQEYNR*PQMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELSQRQNRLLATVL
Subject  10528  *VLISRRNVRRYPSSHLPTFSG*HTTFPLHRHDKLSPQLYQLSKYCYLQV*KFGFQRKHYRPQEYNR*PQMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELSQRQNRLLATVL  10929

Range 14: 10276 to 10479 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
165.1 bits(354) 0.0 67/68(99%) 0/68(0%) Plus/Minus
Query      713  HDTTFAQHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKENS*F*RSVIYDN  916
                HDTTFAQHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKENS*F*RSV+YDN
Subject  10276  HDTTFAQHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKENS*F*RSVMYDN  10479

Range 15: 10993 to 11067 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.6 bits(128) 0.0 25/25(100%) 0/25(0%) Plus/Minus
Query      125  TYTFRTPVSRLSRINILRQRPSIRC  199
                TYTFRTPVSRLSRINILRQRPSIRC
Subject  10993  TYTFRTPVSRLSRINILRQRPSIRC  11067

Range 16: 11116 to 11190 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.6 bits(115) 0.0 25/25(100%) 0/25(0%) Plus/Minus
Query        2  SVR*QHL*PVYQDLLAPQQRSFV*R  76
                SVR*QHL*PVYQDLLAPQQRSFV*R
Subject  11116  SVR*QHL*PVYQDLLAPQQRSFV*R  11190

Range 17: 10136 to 10183 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.7 bits(76) 0.0 15/16(94%) 0/16(0%) Plus/Minus
Query     1009  HKEEKPLA*RQNNLRN  1056
                HKEEKPLA*RQ+NLRN
Subject  10136  HKEEKPLA*RQSNLRN  10183

Range 18: 10288 to 10776 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
374.5 bits(811) 0.0 163/163(100%) 0/163(0%) Minus/Plus
Query      416  DATSKL*IFLRVGVVECVHRR*TRFSGDINRFLREIGIERVRLKREIGEGATRMIFVLSEGSIVILY*SRRICLWTILNRQYCC**SILSL**FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLKPKF  904
                DATSKL*IFLRVGVVECVHRR*TRFSGDINRFLREIGIERVRLKREIGEGATRMIFVLSEGSIVILY*SRRICLWTILNRQYCC**SILSL**FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLKPKF
Subject  10288  DATSKL*IFLRVGVVECVHRR*TRFSGDINRFLREIGIERVRLKREIGEGATRMIFVLSEGSIVILY*SRRICLWTILNRQYCC**SILSL**FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLKPKF  10776

Range 19: 10819 to 11064 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
174.7 bits(375) 0.0 81/82(99%) 0/82(0%) Minus/Plus
Query      128  RGKLIVTV*REGCMLTRKGG*V*RGITSNVTSRN*NLHTP*R*TAEAPY*LEV*VPDQTPY*GSLT*YVYS*EP*YWSAKGI  373
                RGKLIVTV*REGCMLTRKGG*V*RGITSNVTSRN*NL TP*R*TAEAPY*LEV*VPDQTPY*GSLT*YVYS*EP*YWSAKGI
Subject  10819  RGKLIVTV*REGCMLTRKGG*V*RGITSNVTSRN*NLRTP*R*TAEAPY*LEV*VPDQTPY*GSLT*YVYS*EP*YWSAKGI  11064

Range 20: 10136 to 10189 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
39.1 bits(79) 0.0 17/18(94%) 0/18(0%) Minus/Plus
Query     1003  IT*VILALRQRFFLFVCS  1056
                IT*V LALRQRFFLFVCS
Subject  10136  IT*VTLALRQRFFLFVCS  10189

Range 21: 11107 to 11133 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.1 bits(44) 0.0 9/9(100%) 0/9(0%) Minus/Plus
Query       59  TITPLNEAS  85
                TITPLNEAS
Subject  11107  TITPLNEAS  11133

Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome

Sequence ID: KX756669.1 Length: 18313 Number of Matches: 21

Range 1: 10068 to 10760 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
531.2 bits(1153) 0.0 230/231(100%) 0/231(0%) Minus/Plus
Query      247  *VYFLSLVLSYMTLRQNYEFSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC*AKVVS*FYIEVGVFVYGRF*TGNTVASSRFCLCDNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIWGQRLYSCGR*CLR*NPNFYT*R*QYLLNW*SCGESLS*RCRGKVVC*PEKVGRCDEG*RRTLRREIKTYIHRED  939
                *VYFLSLVLSYMTLRQNYEFSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC*AKVVS*FYIEVGVFVYGRF*TGNTVASSRFCLCDNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIWGQRLYSCGR*CLR*NPNFYT*R*QYLLNW*SCGESLS*RCRGKVV *PEKVGRCDEG*RRTLRREIKTYIHRED
Subject  10068  *VYFLSLVLSYMTLRQNYEFSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC*AKVVS*FYIEVGVFVYGRF*TGNTVASSRFCLCDNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIWGQRLYSCGR*CLR*NPNFYT*R*QYLLNW*SCGESLS*RCRGKVVR*PEKVGRCDEG*RRTLRREIKTYIHRED  10760

Range 2: 10809 to 11006 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
156.4 bits(335) 0.0 66/66(100%) 0/66(0%) Minus/Plus
Query        1  HLIEGR*RNMFILESLDTGVRKVYVYDGYSSCCNGTG*L*LL*TKLRC*GAKRSWYTG*RCC*RTD  198
                HLIEGR*RNMFILESLDTGVRKVYVYDGYSSCCNGTG*L*LL*TKLRC*GAKRSWYTG*RCC*RTD
Subject  10809  HLIEGR*RNMFILESLDTGVRKVYVYDGYSSCCNGTG*L*LL*TKLRC*GAKRSWYTG*RCC*RTD  11006

Range 3: 9950 to 10021 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.7 bits(124) 0.0 24/24(100%) 0/24(0%) Minus/Plus
Query      986  YYVGYFGATPKVFPLCV*PLM*VS  1057
                YYVGYFGATPKVFPLCV*PLM*VS
Subject   9950  YYVGYFGATPKVFPLCV*PLM*VS  10021

Range 4: 10168 to 11004 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
621.0 bits(1349) 0.0 278/279(100%) 0/279(0%) Plus/Minus
Query        3  RFVNNTSNRYTKTF*RLNNEASFKGVIVXXXXXXXXXXXXXXIPFALQYQGSQE*TYYVNDPQ*GVWSGT*TSN**GASAVYLHGVCRF*FLDVTFDVIPRHTYPPFRVNIQPSLYTVTISFPRSFTN*VSTATFRYKNLGFNVNTTGHRSTTADPRWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYHKDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLSTKIIRVAPSPISLLRRTRSIPISRKNLFMSPLNLV  839
                RFVNNTSNRYTKTF*RLNNEASFKGVIVSRYRYNSCCNRRRRIPFALQYQGSQE*TYYVNDPQ*GVWSGT*TSN**GASAVYLHGVCRF*FLDVTFDVIPRHTYPPFRVN+QPSLYTVTISFPRSFTN*VSTATFRYKNLGFNVNTTGHRSTTADPRWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYHKDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLSTKIIRVAPSPISLLRRTRSIPISRKNLFMSPLNLV
Subject  10168  RFVNNTSNRYTKTF*RLNNEASFKGVIVSRYRYNSCCNRRRRIPFALQYQGSQE*TYYVNDPQ*GVWSGT*TSN**GASAVYLHGVCRF*FLDVTFDVIPRHTYPPFRVNVQPSLYTVTISFPRSFTN*VSTATFRYKNLGFNVNTTGHRSTTADPRWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYHKDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLSTKIIRVAPSPISLLRRTRSIPISRKNLFMSPLNLV  11004

Range 5: 9950 to 10024 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.6 bits(128) 0.0 24/25(96%) 0/25(0%) Plus/Minus
Query      983  QRNLH*RLHTKRKNLWRSAKITYVI  1057
                QRNLH*RLHTKRKNLWRSAK+TYVI
Subject   9950  QRNLH*RLHTKRKNLWRSAKVTYVI  10024

Range 6: 10087 to 10128 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.3 bits(73) 0.0 14/14(100%) 0/14(0%) Plus/Minus
Query      879  KIHNFDVASYTTTL  920
                KIHNFDVASYTTTL
Subject  10087  KIHNFDVASYTTTL  10128

Range 7: 10395 to 11006 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
403.8 bits(875) 0.0 204/204(100%) 0/204(0%) Plus/Minus
Query        1  VGSLTTPLTGIPRPFSASTTKLRLKEL*SAGXXXXXXXXXXDVYLSHSSIKALKNKHITSTTLNKVSGXXXXXXXXXXXXLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPSTPSR*AFPAALPIK*VLLPSGIKIWVST*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR  612
                VGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPSTPSR*AFPAALPIK*VLLPSGIKIWVST*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR
Subject  10395  VGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPSTPSR*AFPAALPIK*VLLPSGIKIWVST*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR  11006

Range 8: 10053 to 10343 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
223.8 bits(482) 0.0 96/97(99%) 0/97(0%) Plus/Minus
Query      664  ACLKSSINKYAYFNIKSRYYLRSARRSFAWRLPRFLF*GELVLSQSRAKTYLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH*GKKINLDRRKE  954
                ACLKSSINKYAYFNIKSRYYLRSARRSFAWRLPRFLF*GELVLSQSRAKTYLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH*GKKINL+RRKE
Subject  10053  ACLKSSINKYAYFNIKSRYYLRSARRSFAWRLPRFLF*GELVLSQSRAKTYLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH*GKKINLNRRKE  10343

Range 9: 9952 to 10020 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.1 bits(116) 0.0 23/23(100%) 0/23(0%) Plus/Minus
Query      987  ETYIKGYTQRGKTFGVAPK*PT*  1055
                ETYIKGYTQRGKTFGVAPK*PT*
Subject   9952  ETYIKGYTQRGKTFGVAPK*PT*  10020

Range 10: 10411 to 11004 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
402.5 bits(872) 0.0 198/198(100%) 0/198(0%) Minus/Plus
Query        3  PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVETQIFIPEGSSTYLIGKAAGKAYRDGVEGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDXXXXXXXXXXXXGPDTLLRVVDVICLFLRALILECERYTSXXXXXXXXXVPADYNSFKRSFVVEALKGLGIPVRGVVNEP  596
                PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVETQIFIPEGSSTYLIGKAAGKAYRDGVEGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEP
Subject  10411  PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVETQIFIPEGSSTYLIGKAAGKAYRDGVEGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEP  11004

Range 11: 10084 to 10344 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
204.1 bits(439) 0.0 87/87(100%) 0/87(0%) Minus/Plus
Query      663  P*CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*VFARDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*AYLFMDDFKQA  923
                P*CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*VFARDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*AYLFMDDFKQA
Subject  10084  P*CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*VFARDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*AYLFMDDFKQA  10344

Range 12: 9952 to 10017 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.7 bits(113) 0.0 21/22(95%) 0/22(0%) Minus/Plus
Query      990  LRRLFWRYAKGFSSLCVAFNVG  1055
                LRRL WRYAKGFSSLCVAFNVG
Subject   9952  LRRLLWRYAKGFSSLCVAFNVG  10017

Range 13: 10343 to 10747 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
317.7 bits(687) 0.0 134/135(99%) 0/135(0%) Plus/Minus
Query      260  M*VLISRRNVRRYPSSHLPTFSG*HTTFPLHRHDKLSPQLYQLSKYCYLQV*KFGFQRKHYRPQEYNR*PQMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELSQRQNRLLATVL  664
                M*VLISRRNVRRYPSSHLPTFSG* TTFPLHRHDKLSPQLYQLSKYCYLQV*KFGFQRKHYRPQEYNR*PQMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELSQRQNRLLATVL
Subject  10343  M*VLISRRNVRRYPSSHLPTFSG*RTTFPLHRHDKLSPQLYQLSKYCYLQV*KFGFQRKHYRPQEYNR*PQMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELSQRQNRLLATVL  10747

Range 14: 10091 to 10294 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
166.5 bits(357) 0.0 68/68(100%) 0/68(0%) Plus/Minus
Query      713  HDTTFAQHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKENS*F*RSVIYDN  916
                HDTTFAQHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKENS*F*RSVIYDN
Subject  10091  HDTTFAQHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKENS*F*RSVIYDN  10294

Range 15: 10808 to 10882 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.6 bits(128) 0.0 25/25(100%) 0/25(0%) Plus/Minus
Query      125  TYTFRTPVSRLSRINILRQRPSIRC  199
                TYTFRTPVSRLSRINILRQRPSIRC
Subject  10808  TYTFRTPVSRLSRINILRQRPSIRC  10882

Range 16: 10931 to 11005 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.6 bits(115) 0.0 25/25(100%) 0/25(0%) Plus/Minus
Query        2  SVR*QHL*PVYQDLLAPQQRSFV*R  76
                SVR*QHL*PVYQDLLAPQQRSFV*R
Subject  10931  SVR*QHL*PVYQDLLAPQQRSFV*R  11005

Range 17: 9951 to 9998 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.7 bits(76) 0.0 15/16(94%) 0/16(0%) Plus/Minus
Query     1009  HKEEKPLA*RQNNLRN  1056
                HKEEKPLA*RQ+NLRN
Subject   9951  HKEEKPLA*RQSNLRN  9998

Range 18: 10103 to 10591 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
374.5 bits(811) 0.0 163/163(100%) 0/163(0%) Minus/Plus
Query      416  DATSKL*IFLRVGVVECVHRR*TRFSGDINRFLREIGIERVRLKREIGEGATRMIFVLSEGSIVILY*SRRICLWTILNRQYCC**SILSL**FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLKPKF  904
                DATSKL*IFLRVGVVECVHRR*TRFSGDINRFLREIGIERVRLKREIGEGATRMIFVLSEGSIVILY*SRRICLWTILNRQYCC**SILSL**FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLKPKF
Subject  10103  DATSKL*IFLRVGVVECVHRR*TRFSGDINRFLREIGIERVRLKREIGEGATRMIFVLSEGSIVILY*SRRICLWTILNRQYCC**SILSL**FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLKPKF  10591

Range 19: 10634 to 10879 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
175.6 bits(377) 0.0 81/82(99%) 0/82(0%) Minus/Plus
Query      128  RGKLIVTV*REGCMLTRKGG*V*RGITSNVTSRN*NLHTP*R*TAEAPY*LEV*VPDQTPY*GSLT*YVYS*EP*YWSAKGI  373
                RGKLIVTV*REGC LTRKGG*V*RGITSNVTSRN*NLHTP*R*TAEAPY*LEV*VPDQTPY*GSLT*YVYS*EP*YWSAKGI
Subject  10634  RGKLIVTV*REGCTLTRKGG*V*RGITSNVTSRN*NLHTP*R*TAEAPY*LEV*VPDQTPY*GSLT*YVYS*EP*YWSAKGI  10879

Range 20: 9951 to 10004 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
39.1 bits(79) 0.0 17/18(94%) 0/18(0%) Minus/Plus
Query     1003  IT*VILALRQRFFLFVCS  1056
                IT*V LALRQRFFLFVCS
Subject   9951  IT*VTLALRQRFFLFVCS  10004

Range 21: 10922 to 10948 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.1 bits(44) 0.0 9/9(100%) 0/9(0%) Minus/Plus
Query       59  TITPLNEAS  85
                TITPLNEAS
Subject  10922  TITPLNEAS  10948

Grapevine leafroll associated virus 3 isolate Cl 766, complete genome

Sequence ID: EU344893.1 Length: 17919 Number of Matches: 21

Range 1: 9674 to 10366 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
528.0 bits(1146) 0.0 229/231(99%) 0/231(0%) Minus/Plus
Query      247  *VYFLSLVLSYMTLRQNYEFSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC*AKVVS*FYIEVGVFVYGRF*TGNTVASSRFCLCDNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIWGQRLYSCGR*CLR*NPNFYT*R*QYLLNW*SCGESLS*RCRGKVVC*PEKVGRCDEG*RRTLRREIKTYIHRED  939
                *VYFLSLVLSYMTLRQNYEFSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC*AKVVS*FYIEVGVFVYGRF*TGNTVASSRFCLCDNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPI GQRLYSCGR*CLR*NPNF+T*R*QYLLNW*SCGESLS*RCRGKVVC*PEKVGRCDEG*RRTLRREIKTYIHRED
Subject   9674  *VYFLSLVLSYMTLRQNYEFSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC*AKVVS*FYIEVGVFVYGRF*TGNTVASSRFCLCDNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIRGQRLYSCGR*CLR*NPNFHT*R*QYLLNW*SCGESLS*RCRGKVVC*PEKVGRCDEG*RRTLRREIKTYIHRED  10366

Range 2: 10415 to 10612 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
156.4 bits(335) 0.0 66/66(100%) 0/66(0%) Minus/Plus
Query        1  HLIEGR*RNMFILESLDTGVRKVYVYDGYSSCCNGTG*L*LL*TKLRC*GAKRSWYTG*RCC*RTD  198
                HLIEGR*RNMFILESLDTGVRKVYVYDGYSSCCNGTG*L*LL*TKLRC*GAKRSWYTG*RCC*RTD
Subject  10415  HLIEGR*RNMFILESLDTGVRKVYVYDGYSSCCNGTG*L*LL*TKLRC*GAKRSWYTG*RCC*RTD  10612

Range 3: 9556 to 9627 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.7 bits(124) 0.0 24/24(100%) 0/24(0%) Minus/Plus
Query      986  YYVGYFGATPKVFPLCV*PLM*VS  1057
                YYVGYFGATPKVFPLCV*PLM*VS
Subject   9556  YYVGYFGATPKVFPLCV*PLM*VS  9627

Range 4: 9774 to 10610 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
616.4 bits(1339) 0.0 277/279(99%) 0/279(0%) Plus/Minus
Query        3  RFVNNTSNRYTKTF*RLNNEASFKGVIVXXXXXXXXXXXXXXIPFALQYQGSQE*TYYVNDPQ*GVWSGT*TSN**GASAVYLHGVCRF*FLDVTFDVIPRHTYPPFRVNIQPSLYTVTISFPRSFTN*VSTATFRYKNLGFNVNTTGHRSTTADPRWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYHKDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLSTKIIRVAPSPISLLRRTRSIPISRKNLFMSPLNLV  839
                RFVNNTSNRYTKTF*RLNNEASFKGVIVSRYRYNSCCNRRRRIPFALQYQGSQE*TYYVNDPQ*GVWSGT*TSN**GASAVYLHGVCRF*FLDVTFDVIPRHTYPPFRVNIQPSLYTVTISFPRSFTN*VSTATFRY+NLGFNVNTTGHRSTTADP WGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYHKDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLSTKIIRVAPSPISLLRRTRSIPISRKNLFMSPLNLV
Subject   9774  RFVNNTSNRYTKTF*RLNNEASFKGVIVSRYRYNSCCNRRRRIPFALQYQGSQE*TYYVNDPQ*GVWSGT*TSN**GASAVYLHGVCRF*FLDVTFDVIPRHTYPPFRVNIQPSLYTVTISFPRSFTN*VSTATFRYENLGFNVNTTGHRSTTADPGWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYHKDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLSTKIIRVAPSPISLLRRTRSIPISRKNLFMSPLNLV  10610

Range 5: 9556 to 9630 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.6 bits(128) 0.0 24/25(96%) 0/25(0%) Plus/Minus
Query      983  QRNLH*RLHTKRKNLWRSAKITYVI  1057
                QRNLH*RLHTKRKNLWRSAK+TYVI
Subject   9556  QRNLH*RLHTKRKNLWRSAKVTYVI  9630

Range 6: 9693 to 9734 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.3 bits(73) 0.0 14/14(100%) 0/14(0%) Plus/Minus
Query      879  KIHNFDVASYTTTL  920
                KIHNFDVASYTTTL
Subject   9693  KIHNFDVASYTTTL  9734

Range 7: 10001 to 10612 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
402.5 bits(872) 0.0 203/204(100%) 0/204(0%) Plus/Minus
Query        1  VGSLTTPLTGIPRPFSASTTKLRLKEL*SAGXXXXXXXXXXDVYLSHSSIKALKNKHITSTTLNKVSGXXXXXXXXXXXXLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPSTPSR*AFPAALPIK*VLLPSGIKIWVST*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR  612
                VGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPSTPSR*AFPAALPIK*VLLPSG+KIWVST*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR
Subject  10001  VGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPSTPSR*AFPAALPIK*VLLPSGMKIWVST*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR  10612

Range 8: 9659 to 9949 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
223.8 bits(482) 0.0 96/97(99%) 0/97(0%) Plus/Minus
Query      664  ACLKSSINKYAYFNIKSRYYLRSARRSFAWRLPRFLF*GELVLSQSRAKTYLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH*GKKINLDRRKE  954
                ACLKSSINKYAYFNIKSRYYLRSARRSFAWRLPRFLF*GELVLSQSRAKTYLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH*GKKINL+RRKE
Subject   9659  ACLKSSINKYAYFNIKSRYYLRSARRSFAWRLPRFLF*GELVLSQSRAKTYLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH*GKKINLNRRKE  9949

Range 9: 9558 to 9626 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.1 bits(116) 0.0 23/23(100%) 0/23(0%) Plus/Minus
Query      987  ETYIKGYTQRGKTFGVAPK*PT*  1055
                ETYIKGYTQRGKTFGVAPK*PT*
Subject   9558  ETYIKGYTQRGKTFGVAPK*PT*  9626

Range 10: 10017 to 10610 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
402.5 bits(872) 0.0 198/198(100%) 0/198(0%) Minus/Plus
Query        3  PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVETQIFIPEGSSTYLIGKAAGKAYRDGVEGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDXXXXXXXXXXXXGPDTLLRVVDVICLFLRALILECERYTSXXXXXXXXXVPADYNSFKRSFVVEALKGLGIPVRGVVNEP  596
                PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVETQIFIPEGSSTYLIGKAAGKAYRDGVEGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEP
Subject  10017  PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVETQIFIPEGSSTYLIGKAAGKAYRDGVEGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEP  10610

Range 11: 9690 to 9950 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
204.1 bits(439) 0.0 87/87(100%) 0/87(0%) Minus/Plus
Query      663  P*CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*VFARDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*AYLFMDDFKQA  923
                P*CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*VFARDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*AYLFMDDFKQA
Subject   9690  P*CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*VFARDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*AYLFMDDFKQA  9950

Range 12: 9558 to 9623 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.7 bits(113) 0.0 21/22(95%) 0/22(0%) Minus/Plus
Query      990  LRRLFWRYAKGFSSLCVAFNVG  1055
                LRRL WRYAKGFSSLCVAFNVG
Subject   9558  LRRLLWRYAKGFSSLCVAFNVG  9623

Range 13: 9949 to 10353 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
319.5 bits(691) 0.0 134/135(99%) 0/135(0%) Plus/Minus
Query      260  M*VLISRRNVRRYPSSHLPTFSG*HTTFPLHRHDKLSPQLYQLSKYCYLQV*KFGFQRKHYRPQEYNR*PQMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELSQRQNRLLATVL  664
                M*VLISRRNVRRYPSSHLPTFSG*HTTFPLHRHDKLSPQLYQLSKYCYLQV*KFGFQRKHYRPQEYNR*P+MGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELSQRQNRLLATVL
Subject   9949  M*VLISRRNVRRYPSSHLPTFSG*HTTFPLHRHDKLSPQLYQLSKYCYLQV*KFGFQRKHYRPQEYNR*PRMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELSQRQNRLLATVL  10353

Range 14: 9697 to 9900 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
166.5 bits(357) 0.0 68/68(100%) 0/68(0%) Plus/Minus
Query      713  HDTTFAQHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKENS*F*RSVIYDN  916
                HDTTFAQHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKENS*F*RSVIYDN
Subject   9697  HDTTFAQHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKENS*F*RSVIYDN  9900

Range 15: 10414 to 10488 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.6 bits(128) 0.0 25/25(100%) 0/25(0%) Plus/Minus
Query      125  TYTFRTPVSRLSRINILRQRPSIRC  199
                TYTFRTPVSRLSRINILRQRPSIRC
Subject  10414  TYTFRTPVSRLSRINILRQRPSIRC  10488

Range 16: 10537 to 10611 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.6 bits(115) 0.0 25/25(100%) 0/25(0%) Plus/Minus
Query        2  SVR*QHL*PVYQDLLAPQQRSFV*R  76
                SVR*QHL*PVYQDLLAPQQRSFV*R
Subject  10537  SVR*QHL*PVYQDLLAPQQRSFV*R  10611

Range 17: 9557 to 9604 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.7 bits(76) 0.0 15/16(94%) 0/16(0%) Plus/Minus
Query     1009  HKEEKPLA*RQNNLRN  1056
                HKEEKPLA*RQ+NLRN
Subject   9557  HKEEKPLA*RQSNLRN  9604

Range 18: 9709 to 10197 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
371.3 bits(804) 0.0 162/163(99%) 0/163(0%) Minus/Plus
Query      416  DATSKL*IFLRVGVVECVHRR*TRFSGDINRFLREIGIERVRLKREIGEGATRMIFVLSEGSIVILY*SRRICLWTILNRQYCC**SILSL**FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLKPKF  904
                DATSKL*IFLRVGVVECVHRR*TRFSGDINRFLREIGIERVRLKREIGEGATRMIFVLSEGSIVILY*SRRICLWTILNRQYCC**SILSL**FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPH GSAVVLLWPVVFTLKPKF
Subject   9709  DATSKL*IFLRVGVVECVHRR*TRFSGDINRFLREIGIERVRLKREIGEGATRMIFVLSEGSIVILY*SRRICLWTILNRQYCC**SILSL**FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHPGSAVVLLWPVVFTLKPKF  10197

Range 19: 10240 to 10485 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
178.4 bits(383) 0.0 82/82(100%) 0/82(0%) Minus/Plus
Query      128  RGKLIVTV*REGCMLTRKGG*V*RGITSNVTSRN*NLHTP*R*TAEAPY*LEV*VPDQTPY*GSLT*YVYS*EP*YWSAKGI  373
                RGKLIVTV*REGCMLTRKGG*V*RGITSNVTSRN*NLHTP*R*TAEAPY*LEV*VPDQTPY*GSLT*YVYS*EP*YWSAKGI
Subject  10240  RGKLIVTV*REGCMLTRKGG*V*RGITSNVTSRN*NLHTP*R*TAEAPY*LEV*VPDQTPY*GSLT*YVYS*EP*YWSAKGI  10485

Range 20: 9557 to 9610 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
39.1 bits(79) 0.0 17/18(94%) 0/18(0%) Minus/Plus
Query     1003  IT*VILALRQRFFLFVCS  1056
                IT*V LALRQRFFLFVCS
Subject   9557  IT*VTLALRQRFFLFVCS  9610

Range 21: 10528 to 10554 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.1 bits(44) 0.0 9/9(100%) 0/9(0%) Minus/Plus
Query       59  TITPLNEAS  85
                TITPLNEAS
Subject  10528  TITPLNEAS  10554

Grapevine leafroll associated virus 3 isolate WA MR, complete genome

Sequence ID: GU983863.1 Length: 18498 Number of Matches: 21

Range 1: 10253 to 10945 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
528.0 bits(1146) 0.0 229/231(99%) 0/231(0%) Minus/Plus
Query      247  *VYFLSLVLSYMTLRQNYEFSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC*AKVVS*FYIEVGVFVYGRF*TGNTVASSRFCLCDNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIWGQRLYSCGR*CLR*NPNFYT*R*QYLLNW*SCGESLS*RCRGKVVC*PEKVGRCDEG*RRTLRREIKTYIHRED  939
                *VYFLSLVLSYMTLRQNYEFSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC*AKVVS*FYIEVGVFVYGRF*TGNTVASSRFCL DNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGS YRFWNHLQYNLLFPIWGQRLYSCGR*CLR*NPNFYT*R*QYLLNW*SCGESLS*RCRGKVVC*PEKVGRCDEG*RRTLRREIKTYIHRED
Subject  10253  *VYFLSLVLSYMTLRQNYEFSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC*AKVVS*FYIEVGVFVYGRF*TGNTVASSRFCLRDNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSGYRFWNHLQYNLLFPIWGQRLYSCGR*CLR*NPNFYT*R*QYLLNW*SCGESLS*RCRGKVVC*PEKVGRCDEG*RRTLRREIKTYIHRED  10945

Range 2: 10994 to 11191 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
154.6 bits(331) 0.0 65/66(98%) 0/66(0%) Minus/Plus
Query        1  HLIEGR*RNMFILESLDTGVRKVYVYDGYSSCCNGTG*L*LL*TKLRC*GAKRSWYTG*RCC*RTD  198
                HLIEGR*RNMFILESLDTGVRKVYVYDGYS CCNGTG*L*LL*TKLRC*GAKRSWYTG*RCC*RTD
Subject  10994  HLIEGR*RNMFILESLDTGVRKVYVYDGYSGCCNGTG*L*LL*TKLRC*GAKRSWYTG*RCC*RTD  11191

Range 3: 10135 to 10206 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.0 bits(118) 0.0 23/24(96%) 0/24(0%) Minus/Plus
Query      986  YYVGYFGATPKVFPLCV*PLM*VS  1057
                YYVGYFGATPKVFPLCV*P M*VS
Subject  10135  YYVGYFGATPKVFPLCV*PSM*VS  10206

Range 4: 10353 to 11189 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
617.4 bits(1341) 0.0 276/279(99%) 0/279(0%) Plus/Minus
Query        3  RFVNNTSNRYTKTF*RLNNEASFKGVIVXXXXXXXXXXXXXXIPFALQYQGSQE*TYYVNDPQ*GVWSGT*TSN**GASAVYLHGVCRF*FLDVTFDVIPRHTYPPFRVNIQPSLYTVTISFPRSFTN*VSTATFRYKNLGFNVNTTGHRSTTADPRWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYHKDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLSTKIIRVAPSPISLLRRTRSIPISRKNLFMSPLNLV  839
                RFVNNTSNRYTKTF*RLNNEASFKGVIVSRYRYNS CNRRRRIPFALQYQGSQE*TYYVNDPQ*GVWSGT*TSN**GASAVYLHGVCRF*FLDVTFDVIPRHTYPPFRVNIQPSLYTVTISFPRSFTN*VSTATFRYKNLGFNVNTTGHRSTTADPRWGKANCTEGGSKIYT+FHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYH+DKIDY*QQYCLFKIVHKQIRLLQYKITILPSLSTKIIRVAPSPISLLRRTRSIPISRKNLFMSPLNLV
Subject  10353  RFVNNTSNRYTKTF*RLNNEASFKGVIVSRYRYNSRCNRRRRIPFALQYQGSQE*TYYVNDPQ*GVWSGT*TSN**GASAVYLHGVCRF*FLDVTFDVIPRHTYPPFRVNIQPSLYTVTISFPRSFTN*VSTATFRYKNLGFNVNTTGHRSTTADPRWGKANCTEGGSKIYTHFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYHEDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLSTKIIRVAPSPISLLRRTRSIPISRKNLFMSPLNLV  11189

Range 5: 10135 to 10209 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.6 bits(128) 0.0 24/25(96%) 0/25(0%) Plus/Minus
Query      983  QRNLH*RLHTKRKNLWRSAKITYVI  1057
                QRNLH*RLHTKRKNLWRSAK+TYVI
Subject  10135  QRNLH*RLHTKRKNLWRSAKVTYVI  10209

Range 6: 10272 to 10313 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.3 bits(73) 0.0 14/14(100%) 0/14(0%) Plus/Minus
Query      879  KIHNFDVASYTTTL  920
                KIHNFDVASYTTTL
Subject  10272  KIHNFDVASYTTTL  10313

Range 7: 10580 to 11191 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
403.8 bits(875) 0.0 204/204(100%) 0/204(0%) Plus/Minus
Query        1  VGSLTTPLTGIPRPFSASTTKLRLKEL*SAGXXXXXXXXXXDVYLSHSSIKALKNKHITSTTLNKVSGXXXXXXXXXXXXLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPSTPSR*AFPAALPIK*VLLPSGIKIWVST*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR  612
                VGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPSTPSR*AFPAALPIK*VLLPSGIKIWVST*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR
Subject  10580  VGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPSTPSR*AFPAALPIK*VLLPSGIKIWVST*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR  11191

Range 8: 10238 to 10528 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
223.8 bits(482) 0.0 96/97(99%) 0/97(0%) Plus/Minus
Query      664  ACLKSSINKYAYFNIKSRYYLRSARRSFAWRLPRFLF*GELVLSQSRAKTYLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH*GKKINLDRRKE  954
                ACLKSSINKYAYFNIKSRYYLRSARRSFAWRLPRFLF*GELVLSQSRAKTYLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH*GKKINL+RRKE
Subject  10238  ACLKSSINKYAYFNIKSRYYLRSARRSFAWRLPRFLF*GELVLSQSRAKTYLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH*GKKINLNRRKE  10528

Range 9: 10137 to 10205 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.2 bits(112) 0.0 22/23(96%) 0/23(0%) Plus/Minus
Query      987  ETYIKGYTQRGKTFGVAPK*PT*  1055
                ETYI+GYTQRGKTFGVAPK*PT*
Subject  10137  ETYIEGYTQRGKTFGVAPK*PT*  10205

Range 10: 10596 to 11189 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
402.5 bits(872) 0.0 198/198(100%) 0/198(0%) Minus/Plus
Query        3  PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVETQIFIPEGSSTYLIGKAAGKAYRDGVEGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDXXXXXXXXXXXXGPDTLLRVVDVICLFLRALILECERYTSXXXXXXXXXVPADYNSFKRSFVVEALKGLGIPVRGVVNEP  596
                PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVETQIFIPEGSSTYLIGKAAGKAYRDGVEGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEP
Subject  10596  PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVETQIFIPEGSSTYLIGKAAGKAYRDGVEGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEP  11189

Range 11: 10269 to 10529 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
204.1 bits(439) 0.0 87/87(100%) 0/87(0%) Minus/Plus
Query      663  P*CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*VFARDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*AYLFMDDFKQA  923
                P*CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*VFARDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*AYLFMDDFKQA
Subject  10269  P*CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*VFARDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*AYLFMDDFKQA  10529

Range 12: 10137 to 10202 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.7 bits(113) 0.0 21/22(95%) 0/22(0%) Minus/Plus
Query      990  LRRLFWRYAKGFSSLCVAFNVG  1055
                LRRL WRYAKGFSSLCVAFNVG
Subject  10137  LRRLLWRYAKGFSSLCVAFNVG  10202

Range 13: 10528 to 10932 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
316.3 bits(684) 0.0 133/135(99%) 0/135(0%) Plus/Minus
Query      260  M*VLISRRNVRRYPSSHLPTFSG*HTTFPLHRHDKLSPQLYQLSKYCYLQV*KFGFQRKHYRPQEYNR*PQMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELSQRQNRLLATVL  664
                M*VLISRRNVRRYPSSHLPTFSG*HTTFPLHRHDKLSPQLYQLSKYCYLQV*KFGFQRKHYRPQEYNR*PQMGKSKLY*RWFQNLY LPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELS+RQNRLLATVL
Subject  10528  M*VLISRRNVRRYPSSHLPTFSG*HTTFPLHRHDKLSPQLYQLSKYCYLQV*KFGFQRKHYRPQEYNR*PQMGKSKLY*RWFQNLYPLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELSRRQNRLLATVL  10932

Range 14: 10276 to 10479 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
166.5 bits(357) 0.0 68/68(100%) 0/68(0%) Plus/Minus
Query      713  HDTTFAQHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKENS*F*RSVIYDN  916
                HDTTFAQHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKENS*F*RSVIYDN
Subject  10276  HDTTFAQHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKENS*F*RSVIYDN  10479

Range 15: 10993 to 11067 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.6 bits(128) 0.0 25/25(100%) 0/25(0%) Plus/Minus
Query      125  TYTFRTPVSRLSRINILRQRPSIRC  199
                TYTFRTPVSRLSRINILRQRPSIRC
Subject  10993  TYTFRTPVSRLSRINILRQRPSIRC  11067

Range 16: 11116 to 11190 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.6 bits(115) 0.0 25/25(100%) 0/25(0%) Plus/Minus
Query        2  SVR*QHL*PVYQDLLAPQQRSFV*R  76
                SVR*QHL*PVYQDLLAPQQRSFV*R
Subject  11116  SVR*QHL*PVYQDLLAPQQRSFV*R  11190

Range 17: 10136 to 10183 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.7 bits(76) 0.0 15/16(94%) 0/16(0%) Plus/Minus
Query     1009  HKEEKPLA*RQNNLRN  1056
                HKEEKPLA*RQ+NLRN
Subject  10136  HKEEKPLA*RQSNLRN  10183

Range 18: 10288 to 10776 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
369.5 bits(800) 0.0 161/163(99%) 0/163(0%) Minus/Plus
Query      416  DATSKL*IFLRVGVVECVHRR*TRFSGDINRFLREIGIERVRLKREIGEGATRMIFVLSEGSIVILY*SRRICLWTILNRQYCC**SILSL**FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLKPKF  904
                DATSKL*IFLRVGVVECVHRR*TRFSGDINRFLREIGIERVRLKREIGEGATRMIFVLSEGSIVILY*SRRICLWTILNRQYCC**SILS **FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLKPKF
Subject  10288  DATSKL*IFLRVGVVECVHRR*TRFSGDINRFLREIGIERVRLKREIGEGATRMIFVLSEGSIVILY*SRRICLWTILNRQYCC**SILSS**FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWKWV*ILEPPSVQFAFPHLGSAVVLLWPVVFTLKPKF  10776

Range 19: 10819 to 11064 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
178.4 bits(383) 0.0 82/82(100%) 0/82(0%) Minus/Plus
Query      128  RGKLIVTV*REGCMLTRKGG*V*RGITSNVTSRN*NLHTP*R*TAEAPY*LEV*VPDQTPY*GSLT*YVYS*EP*YWSAKGI  373
                RGKLIVTV*REGCMLTRKGG*V*RGITSNVTSRN*NLHTP*R*TAEAPY*LEV*VPDQTPY*GSLT*YVYS*EP*YWSAKGI
Subject  10819  RGKLIVTV*REGCMLTRKGG*V*RGITSNVTSRN*NLHTP*R*TAEAPY*LEV*VPDQTPY*GSLT*YVYS*EP*YWSAKGI  11064

Range 20: 10136 to 10189 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
39.1 bits(79) 0.0 17/18(94%) 0/18(0%) Minus/Plus
Query     1003  IT*VILALRQRFFLFVCS  1056
                IT*V LALRQRFFLFVCS
Subject  10136  IT*VTLALRQRFFLFVCS  10189

Range 21: 11107 to 11133 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.1 bits(44) 0.0 9/9(100%) 0/9(0%) Minus/Plus
Query       59  TITPLNEAS  85
                TITPLNEAS
Subject  11107  TITPLNEAS  11133

Nucleotide Sequence (195 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
20
40
60
80
100
120
140
160
180
195

Descriptions

Alignments

Grapevine leafroll associated virus 3, complete genome

Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 6

Range 1: 8497 to 8688 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
152.3 bits(326) 0.0 64/64(100%) 0/64(0%) Minus/Plus
Query        3  VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSENFGFDVKIFNQAAPYFCSKFLVQVEDSLFF  194
                VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSENFGFDVKIFNQAAPYFCSKFLVQVEDSLFF
Subject   8497  VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSENFGFDVKIFNQAAPYFCSKFLVQVEDSLFF  8688

Range 2: 8498 to 8689 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.9 bits(310) 0.0 62/64(97%) 0/64(0%) Plus/Minus
Query        2  QKRDYPRLELKT*NKNMEQLG*ISLRQNQNFHSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*V  193
                QKRDYPRLELKT*NKNMEQLG*ISLRQNQNFHSEPTYQYLTAAD*I*GYH H*L+YNYNLIP*V
Subject   8498  QKRDYPRLELKT*NKNMEQLG*ISLRQNQNFHSEPTYQYLTAAD*I*GYHRH*LRYNYNLIP*V  8689

Range 3: 8496 to 8690 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.4 bits(274) 0.0 62/65(95%) 0/65(0%) Minus/Plus
Query        1  ST*GIRL*LYCS*W***PHI*SAAVRY*YVGSE*KFWF*RKDI*PSCSIFLF*VFSSSRG*SLFC  195
                ST*GIRL*LY S*W **P+I*SAAVRY*YVGSE*KFWF*RKDI*PSCSIFLF*VFSSSRG*SLFC
Subject   8496  ST*GIRL*LYRS*WR**PYI*SAAVRY*YVGSE*KFWF*RKDI*PSCSIFLF*VFSSSRG*SLFC  8690

Range 4: 8547 to 8690 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.4 bits(239) 0.0 47/48(98%) 0/48(0%) Plus/Minus
Query        1  TKKRLSST*TKNLEQKYGAAWLNIFTSKPKFSLRTDVSISNGCRLNMR  144
                TKKRLSST*TKNLEQKYGAAWLNIFTSKPKFSLRTDVSISNGCRLN+R
Subject   8547  TKKRLSST*TKNLEQKYGAAWLNIFTSKPKFSLRTDVSISNGCRLNIR  8690

Range 5: 8497 to 8688 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.4 bits(239) 0.0 61/64(95%) 0/64(0%) Plus/Minus
Query        3  KKETILDLN*KLRTKIWSSLVKYLYVKTKIFTQNRRINI*RLPTKYEAXXXXXXXXXXXXSPKY  194
                KKETILDLN*KLRTKIWSSLVKYLYVKTKIFTQNRRINI*RLPTKY+AII TNY+ITII*SPKY
Subject   8497  KKETILDLN*KLRTKIWSSLVKYLYVKTKIFTQNRRINI*RLPTKYKAIIATNYDITII*SPKY  8688

Range 6: 8540 to 8689 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.4 bits(215) 0.0 49/50(98%) 0/50(0%) Minus/Plus
Query        2  MIASYLVGSR*ILIRRF*VKILVLT*RYLTKLLHIFVLSF*FKSRIVSFL  151
                MIA YLVGSR*ILIRRF*VKILVLT*RYLTKLLHIFVLSF*FKSRIVSFL
Subject   8540  MIALYLVGSR*ILIRRF*VKILVLT*RYLTKLLHIFVLSF*FKSRIVSFL  8689

Grapevine leafroll associated virus 3 isolate CN415 1 RNA dependent RNA polymerase gene, partial cds

Sequence ID: GU812895.1 Length: 947 Number of Matches: 6

Range 1: 701 to 892 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
152.3 bits(326) 0.0 64/64(100%) 0/64(0%) Minus/Plus
Query        3  VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSENFGFDVKIFNQAAPYFCSKFLVQVEDSLFF  194
                VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSENFGFDVKIFNQAAPYFCSKFLVQVEDSLFF
Subject    701  VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSENFGFDVKIFNQAAPYFCSKFLVQVEDSLFF  892

Range 2: 702 to 893 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.9 bits(310) 0.0 62/64(97%) 0/64(0%) Plus/Minus
Query        2  QKRDYPRLELKT*NKNMEQLG*ISLRQNQNFHSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*V  193
                QKRDYPRLELKT*NKNMEQLG*ISLRQNQNFHSEPTYQYLTAAD*I*GYH H*L+YNYNLIP*V
Subject    702  QKRDYPRLELKT*NKNMEQLG*ISLRQNQNFHSEPTYQYLTAAD*I*GYHRH*LRYNYNLIP*V  893

Range 3: 700 to 894 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.4 bits(274) 0.0 62/65(95%) 0/65(0%) Minus/Plus
Query        1  ST*GIRL*LYCS*W***PHI*SAAVRY*YVGSE*KFWF*RKDI*PSCSIFLF*VFSSSRG*SLFC  195
                ST*GIRL*LY S*W **P+I*SAAVRY*YVGSE*KFWF*RKDI*PSCSIFLF*VFSSSRG*SLFC
Subject    700  ST*GIRL*LYRS*WR**PYI*SAAVRY*YVGSE*KFWF*RKDI*PSCSIFLF*VFSSSRG*SLFC  894

Range 4: 751 to 894 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.4 bits(239) 0.0 47/48(98%) 0/48(0%) Plus/Minus
Query        1  TKKRLSST*TKNLEQKYGAAWLNIFTSKPKFSLRTDVSISNGCRLNMR  144
                TKKRLSST*TKNLEQKYGAAWLNIFTSKPKFSLRTDVSISNGCRLN+R
Subject    751  TKKRLSST*TKNLEQKYGAAWLNIFTSKPKFSLRTDVSISNGCRLNIR  894

Range 5: 701 to 892 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.4 bits(239) 0.0 61/64(95%) 0/64(0%) Plus/Minus
Query        3  KKETILDLN*KLRTKIWSSLVKYLYVKTKIFTQNRRINI*RLPTKYEAXXXXXXXXXXXXSPKY  194
                KKETILDLN*KLRTKIWSSLVKYLYVKTKIFTQNRRINI*RLPTKY+AII TNY+ITII*SPKY
Subject    701  KKETILDLN*KLRTKIWSSLVKYLYVKTKIFTQNRRINI*RLPTKYKAIIATNYDITII*SPKY  892

Range 6: 744 to 893 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.4 bits(215) 0.0 49/50(98%) 0/50(0%) Minus/Plus
Query        2  MIASYLVGSR*ILIRRF*VKILVLT*RYLTKLLHIFVLSF*FKSRIVSFL  151
                MIA YLVGSR*ILIRRF*VKILVLT*RYLTKLLHIFVLSF*FKSRIVSFL
Subject    744  MIALYLVGSR*ILIRRF*VKILVLT*RYLTKLLHIFVLSF*FKSRIVSFL  893

Grapevine leafroll associated virus 3 isolate 623, complete genome

Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 6

Range 1: 8497 to 8688 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
152.3 bits(326) 0.0 64/64(100%) 0/64(0%) Minus/Plus
Query        3  VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSENFGFDVKIFNQAAPYFCSKFLVQVEDSLFF  194
                VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSENFGFDVKIFNQAAPYFCSKFLVQVEDSLFF
Subject   8497  VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSENFGFDVKIFNQAAPYFCSKFLVQVEDSLFF  8688

Range 2: 8498 to 8689 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.9 bits(310) 0.0 62/64(97%) 0/64(0%) Plus/Minus
Query        2  QKRDYPRLELKT*NKNMEQLG*ISLRQNQNFHSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*V  193
                QKRDYPRLELKT*NKNMEQLG*ISLRQNQNFHSEPTYQYLTAAD*I*GYH H*L+YNYNLIP*V
Subject   8498  QKRDYPRLELKT*NKNMEQLG*ISLRQNQNFHSEPTYQYLTAAD*I*GYHRH*LRYNYNLIP*V  8689

Range 3: 8496 to 8690 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.4 bits(274) 0.0 62/65(95%) 0/65(0%) Minus/Plus
Query        1  ST*GIRL*LYCS*W***PHI*SAAVRY*YVGSE*KFWF*RKDI*PSCSIFLF*VFSSSRG*SLFC  195
                ST*GIRL*LY S*W **P+I*SAAVRY*YVGSE*KFWF*RKDI*PSCSIFLF*VFSSSRG*SLFC
Subject   8496  ST*GIRL*LYRS*WR**PYI*SAAVRY*YVGSE*KFWF*RKDI*PSCSIFLF*VFSSSRG*SLFC  8690

Range 4: 8547 to 8690 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.4 bits(239) 0.0 47/48(98%) 0/48(0%) Plus/Minus
Query        1  TKKRLSST*TKNLEQKYGAAWLNIFTSKPKFSLRTDVSISNGCRLNMR  144
                TKKRLSST*TKNLEQKYGAAWLNIFTSKPKFSLRTDVSISNGCRLN+R
Subject   8547  TKKRLSST*TKNLEQKYGAAWLNIFTSKPKFSLRTDVSISNGCRLNIR  8690

Range 5: 8497 to 8688 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.4 bits(239) 0.0 61/64(95%) 0/64(0%) Plus/Minus
Query        3  KKETILDLN*KLRTKIWSSLVKYLYVKTKIFTQNRRINI*RLPTKYEAXXXXXXXXXXXXSPKY  194
                KKETILDLN*KLRTKIWSSLVKYLYVKTKIFTQNRRINI*RLPTKY+AII TNY+ITII*SPKY
Subject   8497  KKETILDLN*KLRTKIWSSLVKYLYVKTKIFTQNRRINI*RLPTKYKAIIATNYDITII*SPKY  8688

Range 6: 8540 to 8689 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.4 bits(215) 0.0 49/50(98%) 0/50(0%) Minus/Plus
Query        2  MIASYLVGSR*ILIRRF*VKILVLT*RYLTKLLHIFVLSF*FKSRIVSFL  151
                MIA YLVGSR*ILIRRF*VKILVLT*RYLTKLLHIFVLSF*FKSRIVSFL
Subject   8540  MIALYLVGSR*ILIRRF*VKILVLT*RYLTKLLHIFVLSF*FKSRIVSFL  8689

Grapevine leafroll associated virus 3 isolate TC BR, complete genome

Sequence ID: KX756668.1 Length: 18498 Number of Matches: 6

Range 1: 8497 to 8688 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
152.3 bits(326) 0.0 64/64(100%) 0/64(0%) Minus/Plus
Query        3  VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSENFGFDVKIFNQAAPYFCSKFLVQVEDSLFF  194
                VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSENFGFDVKIFNQAAPYFCSKFLVQVEDSLFF
Subject   8497  VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSENFGFDVKIFNQAAPYFCSKFLVQVEDSLFF  8688

Range 2: 8498 to 8689 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.9 bits(310) 0.0 62/64(97%) 0/64(0%) Plus/Minus
Query        2  QKRDYPRLELKT*NKNMEQLG*ISLRQNQNFHSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*V  193
                QKRDYPRLELKT*NKNMEQLG*ISLRQNQNFHSEPTYQYLTAAD*I*GYH H*L+YNYNLIP*V
Subject   8498  QKRDYPRLELKT*NKNMEQLG*ISLRQNQNFHSEPTYQYLTAAD*I*GYHRH*LRYNYNLIP*V  8689

Range 3: 8496 to 8690 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.4 bits(274) 0.0 62/65(95%) 0/65(0%) Minus/Plus
Query        1  ST*GIRL*LYCS*W***PHI*SAAVRY*YVGSE*KFWF*RKDI*PSCSIFLF*VFSSSRG*SLFC  195
                ST*GIRL*LY S*W **P+I*SAAVRY*YVGSE*KFWF*RKDI*PSCSIFLF*VFSSSRG*SLFC
Subject   8496  ST*GIRL*LYRS*WR**PYI*SAAVRY*YVGSE*KFWF*RKDI*PSCSIFLF*VFSSSRG*SLFC  8690

Range 4: 8547 to 8690 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.4 bits(239) 0.0 47/48(98%) 0/48(0%) Plus/Minus
Query        1  TKKRLSST*TKNLEQKYGAAWLNIFTSKPKFSLRTDVSISNGCRLNMR  144
                TKKRLSST*TKNLEQKYGAAWLNIFTSKPKFSLRTDVSISNGCRLN+R
Subject   8547  TKKRLSST*TKNLEQKYGAAWLNIFTSKPKFSLRTDVSISNGCRLNIR  8690

Range 5: 8497 to 8688 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.4 bits(239) 0.0 61/64(95%) 0/64(0%) Plus/Minus
Query        3  KKETILDLN*KLRTKIWSSLVKYLYVKTKIFTQNRRINI*RLPTKYEAXXXXXXXXXXXXSPKY  194
                KKETILDLN*KLRTKIWSSLVKYLYVKTKIFTQNRRINI*RLPTKY+AII TNY+ITII*SPKY
Subject   8497  KKETILDLN*KLRTKIWSSLVKYLYVKTKIFTQNRRINI*RLPTKYKAIIATNYDITII*SPKY  8688

Range 6: 8540 to 8689 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.4 bits(215) 0.0 49/50(98%) 0/50(0%) Minus/Plus
Query        2  MIASYLVGSR*ILIRRF*VKILVLT*RYLTKLLHIFVLSF*FKSRIVSFL  151
                MIA YLVGSR*ILIRRF*VKILVLT*RYLTKLLHIFVLSF*FKSRIVSFL
Subject   8540  MIALYLVGSR*ILIRRF*VKILVLT*RYLTKLLHIFVLSF*FKSRIVSFL  8689

Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome

Sequence ID: KX701860.1 Length: 18020 Number of Matches: 6

Range 1: 8015 to 8206 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
152.3 bits(326) 0.0 64/64(100%) 0/64(0%) Minus/Plus
Query        3  VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSENFGFDVKIFNQAAPYFCSKFLVQVEDSLFF  194
                VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSENFGFDVKIFNQAAPYFCSKFLVQVEDSLFF
Subject   8015  VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSENFGFDVKIFNQAAPYFCSKFLVQVEDSLFF  8206

Range 2: 8016 to 8207 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.9 bits(310) 0.0 62/64(97%) 0/64(0%) Plus/Minus
Query        2  QKRDYPRLELKT*NKNMEQLG*ISLRQNQNFHSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*V  193
                QKRDYPRLELKT*NKNMEQLG*ISLRQNQNFHSEPTYQYLTAAD*I*GYH H*L+YNYNLIP*V
Subject   8016  QKRDYPRLELKT*NKNMEQLG*ISLRQNQNFHSEPTYQYLTAAD*I*GYHRH*LRYNYNLIP*V  8207

Range 3: 8014 to 8208 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.4 bits(274) 0.0 62/65(95%) 0/65(0%) Minus/Plus
Query        1  ST*GIRL*LYCS*W***PHI*SAAVRY*YVGSE*KFWF*RKDI*PSCSIFLF*VFSSSRG*SLFC  195
                ST*GIRL*LY S*W **P+I*SAAVRY*YVGSE*KFWF*RKDI*PSCSIFLF*VFSSSRG*SLFC
Subject   8014  ST*GIRL*LYRS*WR**PYI*SAAVRY*YVGSE*KFWF*RKDI*PSCSIFLF*VFSSSRG*SLFC  8208

Range 4: 8065 to 8208 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.4 bits(239) 0.0 47/48(98%) 0/48(0%) Plus/Minus
Query        1  TKKRLSST*TKNLEQKYGAAWLNIFTSKPKFSLRTDVSISNGCRLNMR  144
                TKKRLSST*TKNLEQKYGAAWLNIFTSKPKFSLRTDVSISNGCRLN+R
Subject   8065  TKKRLSST*TKNLEQKYGAAWLNIFTSKPKFSLRTDVSISNGCRLNIR  8208

Range 5: 8015 to 8206 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.4 bits(239) 0.0 61/64(95%) 0/64(0%) Plus/Minus
Query        3  KKETILDLN*KLRTKIWSSLVKYLYVKTKIFTQNRRINI*RLPTKYEAXXXXXXXXXXXXSPKY  194
                KKETILDLN*KLRTKIWSSLVKYLYVKTKIFTQNRRINI*RLPTKY+AII TNY+ITII*SPKY
Subject   8015  KKETILDLN*KLRTKIWSSLVKYLYVKTKIFTQNRRINI*RLPTKYKAIIATNYDITII*SPKY  8206

Range 6: 8058 to 8207 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.4 bits(215) 0.0 49/50(98%) 0/50(0%) Minus/Plus
Query        2  MIASYLVGSR*ILIRRF*VKILVLT*RYLTKLLHIFVLSF*FKSRIVSFL  151
                MIA YLVGSR*ILIRRF*VKILVLT*RYLTKLLHIFVLSF*FKSRIVSFL
Subject   8058  MIALYLVGSR*ILIRRF*VKILVLT*RYLTKLLHIFVLSF*FKSRIVSFL  8207

Nucleotide Sequence (769 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
77
154
231
308
385
462
539
616
693
769

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
539.9 2935.1 27% 1.493e-151 92% KX756668.1
538.1 2935.6 27% 5.318e-151 92% KX701860.1
533.5 2895.7 27% 1.274e-149 89% KJ174518.1
533.5 2883.3 27% 1.274e-149 88% EU259806.1
531.7 2869.6 36% 4.537e-149 90% GQ352632.1

Alignments

Grapevine leafroll associated virus 3 isolate TC BR, complete genome

Sequence ID: KX756668.1 Length: 18498 Number of Matches: 8

Range 1: 996 to 1736 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
539.9 bits(1172) 0.0 240/247(97%) 0/247(0%) Plus/Plus
Query       29  GCVWVVRGDGKKVLMEARXXXXXXXXXXXXXXXFEAVTHALIVVHYHRVVPFTPVKREQPKRAVKQDEQKPKRQASQWAVKPTAVGVHVPLPNKQEAPKPAQSVPQQSLEEKATLTFGLFFSKGGGDESGGVILRKGKLFNRALNVPINVKNTFVWAKIWDEASRRRGYFYVKDSIVKFFPIVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFS  769
                G V V+RGDGKKVLMEARTSTSAVSDASSYD VFEAVTHALIVVHYHRVVPFTPVKREQPK AVKQDEQKPKRQASQWAVKPTAVGVHVPLPNKQEAPKPAQSVPQQSLEEKATLTFGLFFSKGGGDES  VILRKGKLFNRALNVPINVKNTFVWAKIWDEASRRRGYFYVKDSIVKFFPIVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFS
Subject    996  GTVSVLRGDGKKVLMEARTSTSAVSDASSYDVVFEAVTHALIVVHYHRVVPFTPVKREQPKPAVKQDEQKPKRQASQWAVKPTAVGVHVPLPNKQEAPKPAQSVPQQSLEEKATLTFGLFFSKGGGDESDAVILRKGKLFNRALNVPINVKNTFVWAKIWDEASRRRGYFYVKDSIVKFFPIVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFS  1736

Range 2: 995 to 1735 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
511.5 bits(1110) 0.0 240/247(97%) 0/247(0%) Minus/Minus
Query       28  EKEDEKQRRXXXXXXXXXXLNQHHPLVVLTNALSRMLHNSIRGKATSHPGAVFTMKSSIVALPRTIGKNLTMLSLT*KYPLLREASSQILAQTKVFLTLIGTLRALLNNFPFRKMTXXXXXXXXXLKKRPNVRVAFSSNDCCGTDCAGFGASCLFGSGTWTPTAVGLTAHCDACRLGFCSSCLTARLGCSRLTGVNGTTRW*CTTINACVTASNTAS*LDASETAEVEVLASIKTFLPSPLTTQTHP  768
                EKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNALSRMLHNSIRGKATSHPGAVFTMKSSIVALPRTIGKNLTMLSLT*KYPLLREASSQILAQTKVFLTLIGTLRALLNNFPFRKMT  LSSPPPLLKKRPNVRVAFSSNDCCGTDCAGFGASCLFGSGTWTPTAVGLTAHCDACRLGFCSSCLTA LGCSRLTGVNGTTRW*CTTINACVTASNT S*LDASETAEVEVLASIKTFLPSPL T T P
Subject    995  EKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNALSRMLHNSIRGKATSHPGAVFTMKSSIVALPRTIGKNLTMLSLT*KYPLLREASSQILAQTKVFLTLIGTLRALLNNFPFRKMTASLSSPPPLLKKRPNVRVAFSSNDCCGTDCAGFGASCLFGSGTWTPTAVGLTAHCDACRLGFCSSCLTAGLGCSRLTGVNGTTRW*CTTINACVTASNTTS*LDASETAEVEVLASIKTFLPSPLNTLTVP  1735

Range 3: 1332 to 1736 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
328.2 bits(710) 0.0 132/135(98%) 0/135(0%) Minus/Minus
Query      365  RKGR*EATTSVNFSPQPLIVKPTPPFGSAHERPFAHAPQLYTW*GNITPWGRIHNEIFNCSPTPHDREELNNAILDIKISSPTRGFIPNFGPNKGVLNIDRNVKSPVEQLPFPQDDAAALIAPTFTEEKAKRQSG  769
                RKGR*EATTSVNFSPQPLIVKPTPPFGSAHERPFAHAPQLYTW*GNITPWGRIHNEIFNCSPTPHDREELNNAILDIKISSPTRGFIPNFGPNKGVLNIDRNVKSPVEQ PFPQDD  ALIAPTFTEEKAKRQSG
Subject   1332  RKGR*EATTSVNFSPQPLIVKPTPPFGSAHERPFAHAPQLYTW*GNITPWGRIHNEIFNCSPTPHDREELNNAILDIKISSPTRGFIPNFGPNKGVLNIDRNVKSPVEQFPFPQDDGVALIAPTFTEEKAKRQSG  1736

Range 4: 1002 to 1274 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
176.1 bits(378) 0.0 84/91(92%) 0/91(0%) Minus/Minus
Query       35  IRKWYMDANSCWLNSPXXXXXXXXXXXLFDSPFRLLALDRGKRHYPVVVYNNQRMCYSFKHGVVTRRVGNCRS*GPRLHQNLLTIPPHYPN  307
                IRKWYMDANSCWLNSPL*RLPFGLLLILFDS FRLLALD GKRHYPVVVYNNQRMCYSFK+ VVTRRVGNCRS*GPRLHQNLLTIP  Y N
Subject   1002  IRKWYMDANSCWLNSPL*RLPFGLLLILFDSRFRLLALDGGKRHYPVVVYNNQRMCYSFKYDVVTRRVGNCRS*GPRLHQNLLTIPSQYTN  1274

Range 5: 1108 to 1734 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
466.1 bits(1011) 0.0 207/209(99%) 0/209(0%) Minus/Minus
Query      141  KRKMRSNDVCKFLPSASHC*TNTTLW*CSRTPFRACSTTLYVVRQHHTLGPYSQ*NLQL*PYPAR*GRT*QCYP*HKNILSYERLHPKFWPKQRCS*H**ER*EPC*TTSLSAXXXXRSHRPHLY*RKGQTSEWPSPPTTVVEQIALVLVLPAYSEVVHGRQQLLA*QPIVTLAVWASAHLV*QPV*AARA*QG*TALPGGSVQQSTHV  767
                KRKMRSNDVCKFLPSASHC*TNTTLW*CSRTPFRACSTTLYVVRQHHTLGPYSQ*NLQL*PYPAR*GRT*QCYP*HKNILSYERLHPKFWPKQRCS*H**ER*EPC*T SLSAR*RRRSHRPHLY*RKGQTSEWPSPPTTVVEQIALVLVLPAYSEVVHGRQQLLA*QPIVTLAVWASAHLV*QPV*AARA*+G*TALPGGSVQQSTHV
Subject   1108  KRKMRSNDVCKFLPSASHC*TNTTLW*CSRTPFRACSTTLYVVRQHHTLGPYSQ*NLQL*PYPAR*GRT*QCYP*HKNILSYERLHPKFWPKQRCS*H**ER*EPC*TISLSAR*RRRSHRPHLY*RKGQTSEWPSPPTTVVEQIALVLVLPAYSEVVHGRQQLLA*QPIVTLAVWASAHLV*QPV*AARA*RG*TALPGGSVQQSTHV  1734

Range 6: 1036 to 1734 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
449.2 bits(974) 0.0 226/233(97%) 0/233(0%) Plus/Plus
Query       69  *WRRGPQLLQFPTRLVTTPCLKL*HMR*LLYTTTG*CRXXXXXXXXXXXXXNKMSRSPNGKRHNGLLSQQLLASMYHFRISRKHQNQRNLFHNSRWRRRPL*RLAFSSVKVGAMRXXXXXXXXXXXXTGLLTFLSMLRTPLFGPKFGMKPLVGEDIFMSRIAXXXXXXXCGVGLQLKISL*IRPQGVMLPYHV*SCGACAKGRS*ALPKGGVGLTMRG*GEKFTDVVASHLPF  767
                *WRRGPQLLQFPTRLVTT  LKL*HMR*LLYTTTG*CRLP SSASSLN LSNKMSRSPNGKRHNGLLSQQLLASMYHFRISRKHQNQRNLFHNSRWRRRPL*RLAFSSVKVGAMRA  SSCGKG+CSTGLLTFLSMLRTPLFGPKFGMKPLVGEDIFMSRIALLSSSLSCGVGLQLKISL*IRPQGVMLPYHV*SCGACAKGRS*ALPKGGVGLTMRG*GEKFTDVVASHLPF
Subject   1036  *WRRGPQLLQFPTRLVTTSYLKL*HMR*LLYTTTG*CRLPPSSASSLNRLSNKMSRSPNGKRHNGLLSQQLLASMYHFRISRKHQNQRNLFHNSRWRRRPL*RLAFSSVKVGAMRATPSSCGKGNCSTGLLTFLSMLRTPLFGPKFGMKPLVGEDIFMSRIALLSSSLSCGVGLQLKISL*IRPQGVMLPYHV*SCGACAKGRS*ALPKGGVGLTMRG*GEKFTDVVASHLPF  1734

Range 7: 1409 to 1735 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
251.2 bits(542) 0.0 108/109(99%) 0/109(0%) Plus/Plus
Query      442  VVQQGS*RSYQC*EHLCLGQNLG*SLS*ERIFLCQG*HC*VLPYRAG*GYN*RFHCEYGPRV*CCLTTYRVVEHARKGVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLF  768
                +VQQGS*RSYQC*EHLCLGQNLG*SLS*ERIFLCQG*HC*VLPYRAG*GYN*RFHCEYGPRV*CCLTTYRVVEHARKGVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLF
Subject   1409  IVQQGS*RSYQC*EHLCLGQNLG*SLS*ERIFLCQG*HC*VLPYRAG*GYN*RFHCEYGPRV*CCLTTYRVVEHARKGVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLF  1735

Range 8: 1100 to 1360 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
212.8 bits(458) 0.0 86/87(99%) 0/87(0%) Plus/Plus
Query      133  SCNTCVDCCTLPPGSAVYPCQARAA*TGCQTR*AEAQTASVTMGC*ANSCWRPCTTSE*AGSTKTSAICSTTVVGGEGHSDVWPFLQ  393
                SCNTCVDCCTLPPGSAVYP QARAA*TGCQTR*AEAQTASVTMGC*ANSCWRPCTTSE*AGSTKTSAICSTTVVGGEGHSDVWPFLQ
Subject   1100  SCNTCVDCCTLPPGSAVYPRQARAA*TGCQTR*AEAQTASVTMGC*ANSCWRPCTTSE*AGSTKTSAICSTTVVGGEGHSDVWPFLQ  1360

Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome

Sequence ID: KX701860.1 Length: 18020 Number of Matches: 8

Range 1: 514 to 1254 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
538.1 bits(1168) 0.0 240/247(97%) 0/247(0%) Plus/Plus
Query       29  GCVWVVRGDGKKVLMEARXXXXXXXXXXXXXXXFEAVTHALIVVHYHRVVPFTPVKREQPKRAVKQDEQKPKRQASQWAVKPTAVGVHVPLPNKQEAPKPAQSVPQQSLEEKATLTFGLFFSKGGGDESGGVILRKGKLFNRALNVPINVKNTFVWAKIWDEASRRRGYFYVKDSIVKFFPIVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFS  769
                G V  +RGDGKKVLMEARTSTSAVSDASSYDAVFEAVTHALIVVHYHRVVPFTPVKREQPK AVKQDEQKPKRQASQWAVKPTAVGVHVPLPNKQEAPKPAQSVPQQSLEEKATLTFGLFFSKGGGDES  VILRKGKLFNRALNVPINVKNTFVWAKIWDEASRRRGYFYVKDSIVKFFPIVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFS
Subject    514  GTVSALRGDGKKVLMEARTSTSAVSDASSYDAVFEAVTHALIVVHYHRVVPFTPVKREQPKPAVKQDEQKPKRQASQWAVKPTAVGVHVPLPNKQEAPKPAQSVPQQSLEEKATLTFGLFFSKGGGDESDAVILRKGKLFNRALNVPINVKNTFVWAKIWDEASRRRGYFYVKDSIVKFFPIVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFS  1254

Range 2: 513 to 1253 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
511.1 bits(1109) 0.0 240/247(97%) 0/247(0%) Minus/Minus
Query       28  EKEDEKQRRXXXXXXXXXXLNQHHPLVVLTNALSRMLHNSIRGKATSHPGAVFTMKSSIVALPRTIGKNLTMLSLT*KYPLLREASSQILAQTKVFLTLIGTLRALLNNFPFRKMTXXXXXXXXXLKKRPNVRVAFSSNDCCGTDCAGFGASCLFGSGTWTPTAVGLTAHCDACRLGFCSSCLTARLGCSRLTGVNGTTRW*CTTINACVTASNTAS*LDASETAEVEVLASIKTFLPSPLTTQTHP  768
                EKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNALSRMLHNSIRGKATSHPGAVFTMKSSIVALPRTIGKNLTMLSLT*KYPLLREASSQILAQTKVFLTLIGTLRALLNNFPFRKMT  LSSPPPLLKKRPNVRVAFSSNDCCGTDCAGFGASCLFGSGTWTPTAVGLTAHCDACRLGFCSSCLTA LGCSRLTGVNGTTRW*CTTINACVTASNTAS*LDASETAEVEVLASIKTFLPSPL   T P
Subject    513  EKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNALSRMLHNSIRGKATSHPGAVFTMKSSIVALPRTIGKNLTMLSLT*KYPLLREASSQILAQTKVFLTLIGTLRALLNNFPFRKMTASLSSPPPLLKKRPNVRVAFSSNDCCGTDCAGFGASCLFGSGTWTPTAVGLTAHCDACRLGFCSSCLTAGLGCSRLTGVNGTTRW*CTTINACVTASNTAS*LDASETAEVEVLASIKTFLPSPLNALTVP  1253

Range 3: 850 to 1254 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
328.2 bits(710) 0.0 132/135(98%) 0/135(0%) Minus/Minus
Query      365  RKGR*EATTSVNFSPQPLIVKPTPPFGSAHERPFAHAPQLYTW*GNITPWGRIHNEIFNCSPTPHDREELNNAILDIKISSPTRGFIPNFGPNKGVLNIDRNVKSPVEQLPFPQDDAAALIAPTFTEEKAKRQSG  769
                RKGR*EATTSVNFSPQPLIVKPTPPFGSAHERPFAHAPQLYTW*GNITPWGRIHNEIFNCSPTPHDREELNNAILDIKISSPTRGFIPNFGPNKGVLNIDRNVKSPVEQ PFPQDD  ALIAPTFTEEKAKRQSG
Subject    850  RKGR*EATTSVNFSPQPLIVKPTPPFGSAHERPFAHAPQLYTW*GNITPWGRIHNEIFNCSPTPHDREELNNAILDIKISSPTRGFIPNFGPNKGVLNIDRNVKSPVEQFPFPQDDGVALIAPTFTEEKAKRQSG  1254

Range 4: 520 to 792 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
175.2 bits(376) 0.0 84/91(92%) 0/91(0%) Minus/Minus
Query       35  IRKWYMDANSCWLNSPXXXXXXXXXXXLFDSPFRLLALDRGKRHYPVVVYNNQRMCYSFKHGVVTRRVGNCRS*GPRLHQNLLTIPPHYPN  307
                IRKWYMDANSCWLNSPL*RLPFGLLLILFDS FRLLALD GKRHYPVVVYNNQRMCYSFK+GVVTRRVGNCRS*GPRLHQNLLTIP    N
Subject    520  IRKWYMDANSCWLNSPL*RLPFGLLLILFDSRFRLLALDGGKRHYPVVVYNNQRMCYSFKYGVVTRRVGNCRS*GPRLHQNLLTIPSQCTN  792

Range 5: 626 to 1252 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
466.1 bits(1011) 0.0 207/209(99%) 0/209(0%) Minus/Minus
Query      141  KRKMRSNDVCKFLPSASHC*TNTTLW*CSRTPFRACSTTLYVVRQHHTLGPYSQ*NLQL*PYPAR*GRT*QCYP*HKNILSYERLHPKFWPKQRCS*H**ER*EPC*TTSLSAXXXXRSHRPHLY*RKGQTSEWPSPPTTVVEQIALVLVLPAYSEVVHGRQQLLA*QPIVTLAVWASAHLV*QPV*AARA*QG*TALPGGSVQQSTHV  767
                KRKMRSNDVCKFLPSASHC*TNTTLW*CSRTPFRACSTTLYVVRQHHTLGPYSQ*NLQL*PYPAR*GRT*QCYP*HKNILSYERLHPKFWPKQRCS*H**ER*EPC*T SLSAR*RRRSHRPHLY*RKGQTSEWPSPPTTVVEQIALVLVLPAYSEVVHGRQQLLA*QPIVTLAVWASAHLV*QPV*AARA*+G*TALPGGSVQQSTHV
Subject    626  KRKMRSNDVCKFLPSASHC*TNTTLW*CSRTPFRACSTTLYVVRQHHTLGPYSQ*NLQL*PYPAR*GRT*QCYP*HKNILSYERLHPKFWPKQRCS*H**ER*EPC*TISLSAR*RRRSHRPHLY*RKGQTSEWPSPPTTVVEQIALVLVLPAYSEVVHGRQQLLA*QPIVTLAVWASAHLV*QPV*AARA*RG*TALPGGSVQQSTHV  1252

Range 6: 554 to 1252 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
452.9 bits(982) 0.0 227/233(97%) 0/233(0%) Plus/Plus
Query       69  *WRRGPQLLQFPTRLVTTPCLKL*HMR*LLYTTTG*CRXXXXXXXXXXXXXNKMSRSPNGKRHNGLLSQQLLASMYHFRISRKHQNQRNLFHNSRWRRRPL*RLAFSSVKVGAMRXXXXXXXXXXXXTGLLTFLSMLRTPLFGPKFGMKPLVGEDIFMSRIAXXXXXXXCGVGLQLKISL*IRPQGVMLPYHV*SCGACAKGRS*ALPKGGVGLTMRG*GEKFTDVVASHLPF  767
                *WRRGPQLLQFPTRLVTTP LKL*HMR*LLYTTTG*CRLP SSASSLN LSNKMSRSPNGKRHNGLLSQQLLASMYHFRISRKHQNQRNLFHNSRWRRRPL*RLAFSSVKVGAMRA  SSCGKG+CSTGLLTFLSMLRTPLFGPKFGMKPLVGEDIFMSRIALLSSSLSCGVGLQLKISL*IRPQGVMLPYHV*SCGACAKGRS*ALPKGGVGLTMRG*GEKFTDVVASHLPF
Subject    554  *WRRGPQLLQFPTRLVTTPYLKL*HMR*LLYTTTG*CRLPPSSASSLNRLSNKMSRSPNGKRHNGLLSQQLLASMYHFRISRKHQNQRNLFHNSRWRRRPL*RLAFSSVKVGAMRATPSSCGKGNCSTGLLTFLSMLRTPLFGPKFGMKPLVGEDIFMSRIALLSSSLSCGVGLQLKISL*IRPQGVMLPYHV*SCGACAKGRS*ALPKGGVGLTMRG*GEKFTDVVASHLPF  1252

Range 7: 927 to 1253 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
251.2 bits(542) 0.0 108/109(99%) 0/109(0%) Plus/Plus
Query      442  VVQQGS*RSYQC*EHLCLGQNLG*SLS*ERIFLCQG*HC*VLPYRAG*GYN*RFHCEYGPRV*CCLTTYRVVEHARKGVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLF  768
                +VQQGS*RSYQC*EHLCLGQNLG*SLS*ERIFLCQG*HC*VLPYRAG*GYN*RFHCEYGPRV*CCLTTYRVVEHARKGVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLF
Subject    927  IVQQGS*RSYQC*EHLCLGQNLG*SLS*ERIFLCQG*HC*VLPYRAG*GYN*RFHCEYGPRV*CCLTTYRVVEHARKGVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLF  1253

Range 8: 618 to 878 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
212.8 bits(458) 0.0 86/87(99%) 0/87(0%) Plus/Plus
Query      133  SCNTCVDCCTLPPGSAVYPCQARAA*TGCQTR*AEAQTASVTMGC*ANSCWRPCTTSE*AGSTKTSAICSTTVVGGEGHSDVWPFLQ  393
                SCNTCVDCCTLPPGSAVYP QARAA*TGCQTR*AEAQTASVTMGC*ANSCWRPCTTSE*AGSTKTSAICSTTVVGGEGHSDVWPFLQ
Subject    618  SCNTCVDCCTLPPGSAVYPRQARAA*TGCQTR*AEAQTASVTMGC*ANSCWRPCTTSE*AGSTKTSAICSTTVVGGEGHSDVWPFLQ  878

Grapevine leafroll associated virus 3, complete genome

Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 8

Range 1: 996 to 1736 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
533.5 bits(1158) 0.0 238/247(96%) 0/247(0%) Plus/Plus
Query       29  GCVWVVRGDGKKVLMEARXXXXXXXXXXXXXXXFEAVTHALIVVHYHRVVPFTPVKREQPKRAVKQDEQKPKRQASQWAVKPTAVGVHVPLPNKQEAPKPAQSVPQQSLEEKATLTFGLFFSKGGGDESGGVILRKGKLFNRALNVPINVKNTFVWAKIWDEASRRRGYFYVKDSIVKFFPIVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFS  769
                G V  +RGDGK+VLMEARTSTSAVSDASSYDAVFEAVT+ALIVVHYHRVVPFTPVKREQPK AVKQDEQKPKRQASQWAVKPTAVGVHVPLPNKQEAPKPAQSVPQQSLEEKATLTFGLFFSKGGGDES  VILRKGKLFNRALNVPINVKNTFVWAKIWDEASRRRGYFYVKDSIVKFFPIVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFS
Subject    996  GTVSALRGDGKRVLMEARTSTSAVSDASSYDAVFEAVTNALIVVHYHRVVPFTPVKREQPKPAVKQDEQKPKRQASQWAVKPTAVGVHVPLPNKQEAPKPAQSVPQQSLEEKATLTFGLFFSKGGGDESDAVILRKGKLFNRALNVPINVKNTFVWAKIWDEASRRRGYFYVKDSIVKFFPIVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFS  1736

Range 2: 995 to 1735 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
503.3 bits(1092) 0.0 238/247(96%) 0/247(0%) Minus/Minus
Query       28  EKEDEKQRRXXXXXXXXXXLNQHHPLVVLTNALSRMLHNSIRGKATSHPGAVFTMKSSIVALPRTIGKNLTMLSLT*KYPLLREASSQILAQTKVFLTLIGTLRALLNNFPFRKMTXXXXXXXXXLKKRPNVRVAFSSNDCCGTDCAGFGASCLFGSGTWTPTAVGLTAHCDACRLGFCSSCLTARLGCSRLTGVNGTTRW*CTTINACVTASNTAS*LDASETAEVEVLASIKTFLPSPLTTQTHP  768
                EKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNALSRMLHNSIRGKATSHPGAVFTMKSSIVALPRTIGKNLTMLSLT*KYPLLREASSQILAQTKVFLTLIGTLRALLNNFPFRKMT  LSSPPPLLKKRPNVRVAFSSNDCCGTDCAGFGASCLFGSGTWTPTAVGLTAHCDACRLGFCSSCLTA LGCSRLTGVNGTTRW*CTTINA VTASNTAS*LDASETAEVEVLASIKT LPSPL   T P
Subject    995  EKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNALSRMLHNSIRGKATSHPGAVFTMKSSIVALPRTIGKNLTMLSLT*KYPLLREASSQILAQTKVFLTLIGTLRALLNNFPFRKMTASLSSPPPLLKKRPNVRVAFSSNDCCGTDCAGFGASCLFGSGTWTPTAVGLTAHCDACRLGFCSSCLTAGLGCSRLTGVNGTTRW*CTTINAFVTASNTAS*LDASETAEVEVLASIKTLLPSPLNALTVP  1735

Range 3: 1332 to 1736 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
325.9 bits(705) 0.0 131/135(97%) 0/135(0%) Minus/Minus
Query      365  RKGR*EATTSVNFSPQPLIVKPTPPFGSAHERPFAHAPQLYTW*GNITPWGRIHNEIFNCSPTPHDREELNNAILDIKISSPTRGFIPNFGPNKGVLNIDRNVKSPVEQLPFPQDDAAALIAPTFTEEKAKRQSG  769
                RKGR*EATTSVNFSPQPLIVKPTPPFGSAHERPFAHAPQLYTW*GNITPWGRIHNEIFNCSPTPHDREELNNAILDIKISSPTRGFIP+FGPNKGVLNIDRNVKSPVEQ PFPQDD  ALIAPTFTEEKAKRQSG
Subject   1332  RKGR*EATTSVNFSPQPLIVKPTPPFGSAHERPFAHAPQLYTW*GNITPWGRIHNEIFNCSPTPHDREELNNAILDIKISSPTRGFIPDFGPNKGVLNIDRNVKSPVEQFPFPQDDGVALIAPTFTEEKAKRQSG  1736

Range 4: 1002 to 1274 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
167.4 bits(359) 0.0 81/91(89%) 0/91(0%) Minus/Minus
Query       35  IRKWYMDANSCWLNSPXXXXXXXXXXXLFDSPFRLLALDRGKRHYPVVVYNNQRMCYSFKHGVVTRRVGNCRS*GPRLHQNLLTIPPHYPN  307
                IRKWYMDANSCWLNSPL*RLPFGLLLILFDS FRLLALD GKRHYPVVVYNNQR+CYSFK+ VVTRRVGNCRS*GPRLHQN LTIP    N
Subject   1002  IRKWYMDANSCWLNSPL*RLPFGLLLILFDSRFRLLALDGGKRHYPVVVYNNQRICYSFKYSVVTRRVGNCRS*GPRLHQNPLTIPSQCTN  1274

Range 5: 1108 to 1734 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
463.4 bits(1005) 0.0 205/209(98%) 0/209(0%) Minus/Minus
Query      141  KRKMRSNDVCKFLPSASHC*TNTTLW*CSRTPFRACSTTLYVVRQHHTLGPYSQ*NLQL*PYPAR*GRT*QCYP*HKNILSYERLHPKFWPKQRCS*H**ER*EPC*TTSLSAXXXXRSHRPHLY*RKGQTSEWPSPPTTVVEQIALVLVLPAYSEVVHGRQQLLA*QPIVTLAVWASAHLV*QPV*AARA*QG*TALPGGSVQQSTHV  767
                KRKMRSNDVCKFLPSASHC*TNTTLW*CSRTPFRACSTTLYVVRQHHTLGPYSQ*NLQL*PYPAR*GRT*QCYP*HKNILSYERLHP+FWPKQRCS*H**ER*EPC*T SLSAR*RRRSHRPHLY*RKGQTSEWPSPPTTVVEQIALVLVLPAYSEVVHGRQQLLA*QPIVTLAVWASAHLV*QPV*AARA*+G*TALPGGSVQQSTH+
Subject   1108  KRKMRSNDVCKFLPSASHC*TNTTLW*CSRTPFRACSTTLYVVRQHHTLGPYSQ*NLQL*PYPAR*GRT*QCYP*HKNILSYERLHPRFWPKQRCS*H**ER*EPC*TISLSAR*RRRSHRPHLY*RKGQTSEWPSPPTTVVEQIALVLVLPAYSEVVHGRQQLLA*QPIVTLAVWASAHLV*QPV*AARA*RG*TALPGGSVQQSTHL  1734

Range 6: 1036 to 1734 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
440.9 bits(956) 0.0 224/233(96%) 0/233(0%) Plus/Plus
Query       69  *WRRGPQLLQFPTRLVTTPCLKL*HMR*LLYTTTG*CRXXXXXXXXXXXXXNKMSRSPNGKRHNGLLSQQLLASMYHFRISRKHQNQRNLFHNSRWRRRPL*RLAFSSVKVGAMRXXXXXXXXXXXXTGLLTFLSMLRTPLFGPKFGMKPLVGEDIFMSRIAXXXXXXXCGVGLQLKISL*IRPQGVMLPYHV*SCGACAKGRS*ALPKGGVGLTMRG*GEKFTDVVASHLPF  767
                *WRRGPQLLQFPTRLVTT  LKL* MR*LLYTTTG*CRLP SSASSLN LSNKMSRSPNGKRHNGLLSQQLLASMYHFRISRKHQNQRNLFHNSRWRRRPL*RLAFSSVKVGAMRA  SSCGKG+CSTGLLTFLSMLRTPLFGPK GMKPLVGEDIFMSRIALLSSSLSCGVGLQLKISL*IRPQGVMLPYHV*SCGACAKGRS*ALPKGGVGLTMRG*GEKFTDVVASHLPF
Subject   1036  *WRRGPQLLQFPTRLVTTLYLKL*QMR*LLYTTTG*CRLPPSSASSLNRLSNKMSRSPNGKRHNGLLSQQLLASMYHFRISRKHQNQRNLFHNSRWRRRPL*RLAFSSVKVGAMRATPSSCGKGNCSTGLLTFLSMLRTPLFGPKSGMKPLVGEDIFMSRIALLSSSLSCGVGLQLKISL*IRPQGVMLPYHV*SCGACAKGRS*ALPKGGVGLTMRG*GEKFTDVVASHLPF  1734

Range 7: 1409 to 1735 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
251.2 bits(542) 0.0 108/109(99%) 0/109(0%) Plus/Plus
Query      442  VVQQGS*RSYQC*EHLCLGQNLG*SLS*ERIFLCQG*HC*VLPYRAG*GYN*RFHCEYGPRV*CCLTTYRVVEHARKGVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLF  768
                +VQQGS*RSYQC*EHLCLGQNLG*SLS*ERIFLCQG*HC*VLPYRAG*GYN*RFHCEYGPRV*CCLTTYRVVEHARKGVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLF
Subject   1409  IVQQGS*RSYQC*EHLCLGQNLG*SLS*ERIFLCQG*HC*VLPYRAG*GYN*RFHCEYGPRV*CCLTTYRVVEHARKGVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLF  1735

Range 8: 1100 to 1360 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
210.0 bits(452) 0.0 85/87(98%) 0/87(0%) Plus/Plus
Query      133  SCNTCVDCCTLPPGSAVYPCQARAA*TGCQTR*AEAQTASVTMGC*ANSCWRPCTTSE*AGSTKTSAICSTTVVGGEGHSDVWPFLQ  393
                SCN CVDCCTLPPGSAVYP QARAA*TGCQTR*AEAQTASVTMGC*ANSCWRPCTTSE*AGSTKTSAICSTTVVGGEGHSDVWPFLQ
Subject   1100  SCNKCVDCCTLPPGSAVYPRQARAA*TGCQTR*AEAQTASVTMGC*ANSCWRPCTTSE*AGSTKTSAICSTTVVGGEGHSDVWPFLQ  1360

Grapevine leafroll associated virus 3 isolate GP18, complete genome

Sequence ID: EU259806.1 Length: 18498 Number of Matches: 8

Range 1: 996 to 1736 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
533.5 bits(1158) 0.0 236/247(96%) 0/247(0%) Plus/Plus
Query       29  GCVWVVRGDGKKVLMEARXXXXXXXXXXXXXXXFEAVTHALIVVHYHRVVPFTPVKREQPKRAVKQDEQKPKRQASQWAVKPTAVGVHVPLPNKQEAPKPAQSVPQQSLEEKATLTFGLFFSKGGGDESGGVILRKGKLFNRALNVPINVKNTFVWAKIWDEASRRRGYFYVKDSIVKFFPIVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFS  769
                G V  +RGDGK+VLMEARTSTSA SDASSYDAVFEAVTHALIVVHYHRVVPFTPV+REQPK AVKQDEQKPKRQ SQWAVKPTAVGVHVPLPNKQEAPKPAQSVPQQSLEEKATLTFGLFFSKGGGDES  VILRKGKLFNRALNVPINVKNTFVWAKIWDEASRRRGYFYVKDSIVKFFPIVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFS
Subject    996  GTVSALRGDGKRVLMEARTSTSAFSDASSYDAVFEAVTHALIVVHYHRVVPFTPVRREQPKPAVKQDEQKPKRQVSQWAVKPTAVGVHVPLPNKQEAPKPAQSVPQQSLEEKATLTFGLFFSKGGGDESDAVILRKGKLFNRALNVPINVKNTFVWAKIWDEASRRRGYFYVKDSIVKFFPIVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFS  1736

Range 2: 995 to 1735 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
504.2 bits(1094) 0.0 237/247(96%) 0/247(0%) Minus/Minus
Query       28  EKEDEKQRRXXXXXXXXXXLNQHHPLVVLTNALSRMLHNSIRGKATSHPGAVFTMKSSIVALPRTIGKNLTMLSLT*KYPLLREASSQILAQTKVFLTLIGTLRALLNNFPFRKMTXXXXXXXXXLKKRPNVRVAFSSNDCCGTDCAGFGASCLFGSGTWTPTAVGLTAHCDACRLGFCSSCLTARLGCSRLTGVNGTTRW*CTTINACVTASNTAS*LDASETAEVEVLASIKTFLPSPLTTQTHP  768
                EKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNALSRMLHNSIRGKATSHPGAVFTMKSSIVALPRTIGKNLTMLSLT*KYPLLREASSQILAQTKVFLTLIGTLRALLNNFPFRKMT  LSSPPPLLKKRPNVRVAFSSNDCCGTDCAGFGASCLFGSGTWTPTAVGLTAHCD CRLGFCSSCLTA LGCSRLTGVNGTTRW*CTTINACVTASNTAS*LDASE AEVEVLASIKT LPSPL   T P
Subject    995  EKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNALSRMLHNSIRGKATSHPGAVFTMKSSIVALPRTIGKNLTMLSLT*KYPLLREASSQILAQTKVFLTLIGTLRALLNNFPFRKMTASLSSPPPLLKKRPNVRVAFSSNDCCGTDCAGFGASCLFGSGTWTPTAVGLTAHCDTCRLGFCSSCLTAGLGCSRLTGVNGTTRW*CTTINACVTASNTAS*LDASENAEVEVLASIKTLLPSPLNALTVP  1735

Range 3: 1332 to 1736 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
322.7 bits(698) 0.0 129/135(96%) 0/135(0%) Minus/Minus
Query      365  RKGR*EATTSVNFSPQPLIVKPTPPFGSAHERPFAHAPQLYTW*GNITPWGRIHNEIFNCSPTPHDREELNNAILDIKISSPTRGFIPNFGPNKGVLNIDRNVKSPVEQLPFPQDDAAALIAPTFTEEKAKRQSG  769
                RKGR*EATTSVNFSPQPLIVKPTPPFGSAHERPFAHAPQLYTW*GNITPWGRIHNEIFNCSPTPHDREELNNAILD+KISSPTRGFIP+FGPNKGVLNIDRNVKSPVEQ P PQDD  ALIAPTFTEEKAKRQSG
Subject   1332  RKGR*EATTSVNFSPQPLIVKPTPPFGSAHERPFAHAPQLYTW*GNITPWGRIHNEIFNCSPTPHDREELNNAILDVKISSPTRGFIPDFGPNKGVLNIDRNVKSPVEQFPLPQDDGVALIAPTFTEEKAKRQSG  1736

Range 4: 1002 to 1274 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
166.0 bits(356) 0.0 80/91(88%) 0/91(0%) Minus/Minus
Query       35  IRKWYMDANSCWLNSPXXXXXXXXXXXLFDSPFRLLALDRGKRHYPVVVYNNQRMCYSFKHGVVTRRVGNCRS*GPRLHQNLLTIPPHYPN  307
                IRKWYMDANSCWLNSPL* LPFGLLLILFDS FRLLA D GKRHYPVVVYNNQRMCYSFK+GVVTRRVG CRS*GPRLHQN LTIP    N
Subject   1002  IRKWYMDANSCWLNSPL*HLPFGLLLILFDSRFRLLAPDGGKRHYPVVVYNNQRMCYSFKYGVVTRRVGKCRS*GPRLHQNPLTIPSQCTN  1274

Range 5: 1108 to 1734 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
457.9 bits(993) 0.0 204/209(98%) 0/209(0%) Minus/Minus
Query      141  KRKMRSNDVCKFLPSASHC*TNTTLW*CSRTPFRACSTTLYVVRQHHTLGPYSQ*NLQL*PYPAR*GRT*QCYP*HKNILSYERLHPKFWPKQRCS*H**ER*EPC*TTSLSAXXXXRSHRPHLY*RKGQTSEWPSPPTTVVEQIALVLVLPAYSEVVHGRQQLLA*QPIVTLAVWASAHLV*QPV*AARA*QG*TALPGGSVQQSTHV  767
                KRKMRSNDVCKFLPSASHC*TNTTLW*CSRTPFRACSTTLYVVRQHHTLGPYSQ*NLQL*PYPAR*GRT*QCYP* KNILSYERLHP+FWPKQRCS*H**ER*EPC*T S SAR*RRRSHRPHLY*RKGQTSEWPSPPTTVVEQIALVLVLPAYSEVVHGRQQLLA*QPIVTLAVWASAHLV*QPV*AARA*+G*TALPGGSVQQSTHV
Subject   1108  KRKMRSNDVCKFLPSASHC*TNTTLW*CSRTPFRACSTTLYVVRQHHTLGPYSQ*NLQL*PYPAR*GRT*QCYP*RKNILSYERLHPRFWPKQRCS*H**ER*EPC*TISPSAR*RRRSHRPHLY*RKGQTSEWPSPPTTVVEQIALVLVLPAYSEVVHGRQQLLA*QPIVTLAVWASAHLV*QPV*AARA*RG*TALPGGSVQQSTHV  1734

Range 6: 1036 to 1734 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
440.5 bits(955) 0.0 221/233(95%) 0/233(0%) Plus/Plus
Query       69  *WRRGPQLLQFPTRLVTTPCLKL*HMR*LLYTTTG*CRXXXXXXXXXXXXXNKMSRSPNGKRHNGLLSQQLLASMYHFRISRKHQNQRNLFHNSRWRRRPL*RLAFSSVKVGAMRXXXXXXXXXXXXTGLLTFLSMLRTPLFGPKFGMKPLVGEDIFMSRIAXXXXXXXCGVGLQLKISL*IRPQGVMLPYHV*SCGACAKGRS*ALPKGGVGLTMRG*GEKFTDVVASHLPF  767
                *WRRGPQLL FPTRLVTTP LKL*HMR*LLYTTTG*CRLP S ASSLN LSNKMSRSPNGK HNGLLSQQLLASMYHFRISRKHQNQRNLFHNSRWRRRPL*RLAFSSVKVGAMRA  SSCG+G+CSTGLLTFLSMLRTPLFGPK GMKPLVGEDIF SRIALLSSSLSCGVGLQLKISL*IRPQGVMLPYHV*SCGACAKGRS*ALPKGGVGLTMRG*GEKFTDVVASHLPF
Subject   1036  *WRRGPQLLHFPTRLVTTPYLKL*HMR*LLYTTTG*CRLPPSGASSLNRLSNKMSRSPNGKCHNGLLSQQLLASMYHFRISRKHQNQRNLFHNSRWRRRPL*RLAFSSVKVGAMRATPSSCGRGNCSTGLLTFLSMLRTPLFGPKSGMKPLVGEDIFTSRIALLSSSLSCGVGLQLKISL*IRPQGVMLPYHV*SCGACAKGRS*ALPKGGVGLTMRG*GEKFTDVVASHLPF  1734

Range 7: 1409 to 1735 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
245.8 bits(530) 0.0 107/109(98%) 0/109(0%) Plus/Plus
Query      442  VVQQGS*RSYQC*EHLCLGQNLG*SLS*ERIFLCQG*HC*VLPYRAG*GYN*RFHCEYGPRV*CCLTTYRVVEHARKGVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLF  768
                +VQQGS*RSYQC*EHLCLGQNLG*SLS*ERIFL QG*HC*VLPYRAG*GYN*RFHCEYGPRV*CCLTTYRVVEHARKGVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLF
Subject   1409  IVQQGS*RSYQC*EHLCLGQNLG*SLS*ERIFLRQG*HC*VLPYRAG*GYN*RFHCEYGPRV*CCLTTYRVVEHARKGVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLF  1735

Range 8: 1100 to 1360 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
212.8 bits(458) 0.0 86/87(99%) 0/87(0%) Plus/Plus
Query      133  SCNTCVDCCTLPPGSAVYPCQARAA*TGCQTR*AEAQTASVTMGC*ANSCWRPCTTSE*AGSTKTSAICSTTVVGGEGHSDVWPFLQ  393
                SCNTCVDCCTLPPGSAVYP QARAA*TGCQTR*AEAQTASVTMGC*ANSCWRPCTTSE*AGSTKTSAICSTTVVGGEGHSDVWPFLQ
Subject   1100  SCNTCVDCCTLPPGSAVYPRQARAA*TGCQTR*AEAQTASVTMGC*ANSCWRPCTTSE*AGSTKTSAICSTTVVGGEGHSDVWPFLQ  1360

Grapevine leafroll associated virus 3 isolate 623, complete genome

Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 8

Range 1: 996 to 1736 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
531.7 bits(1154) 0.0 236/247(96%) 0/247(0%) Plus/Plus
Query       29  GCVWVVRGDGKKVLMEARXXXXXXXXXXXXXXXFEAVTHALIVVHYHRVVPFTPVKREQPKRAVKQDEQKPKRQASQWAVKPTAVGVHVPLPNKQEAPKPAQSVPQQSLEEKATLTFGLFFSKGGGDESGGVILRKGKLFNRALNVPINVKNTFVWAKIWDEASRRRGYFYVKDSIVKFFPIVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFS  769
                G V  +RGDGKKVLMEARTSTSA SDASSYDAVFEAVTHALIVVHYHRVVPFTPVKREQPK AVKQDEQKPKRQ SQWAVKPTAVGVHVPLPNKQEAPKPA+SVPQQSLEEKATLTFGLFFSKGGGDES  VILRKGKLFNRALNVPI VKNTFVWAKIWDEASRRRGYFYVKDSIVKFFPIVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFS
Subject    996  GTVSALRGDGKKVLMEARTSTSASSDASSYDAVFEAVTHALIVVHYHRVVPFTPVKREQPKPAVKQDEQKPKRQVSQWAVKPTAVGVHVPLPNKQEAPKPARSVPQQSLEEKATLTFGLFFSKGGGDESDAVILRKGKLFNRALNVPIKVKNTFVWAKIWDEASRRRGYFYVKDSIVKFFPIVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFS  1736

Range 2: 995 to 1735 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
501.0 bits(1087) 0.0 237/247(96%) 0/247(0%) Minus/Minus
Query       28  EKEDEKQRRXXXXXXXXXXLNQHHPLVVLTNALSRMLHNSIRGKATSHPGAVFTMKSSIVALPRTIGKNLTMLSLT*KYPLLREASSQILAQTKVFLTLIGTLRALLNNFPFRKMTXXXXXXXXXLKKRPNVRVAFSSNDCCGTDCAGFGASCLFGSGTWTPTAVGLTAHCDACRLGFCSSCLTARLGCSRLTGVNGTTRW*CTTINACVTASNTAS*LDASETAEVEVLASIKTFLPSPLTTQTHP  768
                EKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNALSRMLHNSIRGKATSHPGAVFTMKSSIVALPRTIGKNLTMLSLT*KYPLLREASSQILAQTKVFLTLIGTLRALLNNFPFRKMT  LSSPPPLLKKRPNVRVAFSSNDCCGTD AGFGASCLFGSGTWTPTAVGLTAHCD CRLGFCSSCLTA LGCSRLTGVNGTTRW*CTTINACVTASNTAS*LDASE AEVEVLASIKTFLPSPL   T P
Subject    995  EKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNALSRMLHNSIRGKATSHPGAVFTMKSSIVALPRTIGKNLTMLSLT*KYPLLREASSQILAQTKVFLTLIGTLRALLNNFPFRKMTASLSSPPPLLKKRPNVRVAFSSNDCCGTDRAGFGASCLFGSGTWTPTAVGLTAHCDTCRLGFCSSCLTAGLGCSRLTGVNGTTRW*CTTINACVTASNTAS*LDASEDAEVEVLASIKTFLPSPLNALTVP  1735

Range 3: 1332 to 1736 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
317.7 bits(687) 0.0 129/135(96%) 0/135(0%) Minus/Minus
Query      365  RKGR*EATTSVNFSPQPLIVKPTPPFGSAHERPFAHAPQLYTW*GNITPWGRIHNEIFNCSPTPHDREELNNAILDIKISSPTRGFIPNFGPNKGVLNIDRNVKSPVEQLPFPQDDAAALIAPTFTEEKAKRQSG  769
                RKGR*EATTSVNFSPQPLIVKPTPPFGSAHERPFAHAPQLYT *GNITPWGRIHNEIFNCSPTPHDREELNNAILDIKISSPTRGFIP+FGPNKGVLN DRNVKSPVEQ PFPQDD  ALIAPTFTEEKAKRQSG
Subject   1332  RKGR*EATTSVNFSPQPLIVKPTPPFGSAHERPFAHAPQLYTR*GNITPWGRIHNEIFNCSPTPHDREELNNAILDIKISSPTRGFIPDFGPNKGVLNFDRNVKSPVEQFPFPQDDGVALIAPTFTEEKAKRQSG  1736

Range 4: 1002 to 1274 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
172.4 bits(370) 0.0 82/91(90%) 0/91(0%) Minus/Minus
Query       35  IRKWYMDANSCWLNSPXXXXXXXXXXXLFDSPFRLLALDRGKRHYPVVVYNNQRMCYSFKHGVVTRRVGNCRS*GPRLHQNLLTIPPHYPN  307
                IRKWYMDANSCWLNSPL* LPFGLLLILFDS FRLLALD GKRHYPVVVYNNQRMCYSFK+GVVTRRVG CRS*GPRLHQNLLTIP    N
Subject   1002  IRKWYMDANSCWLNSPL*HLPFGLLLILFDSRFRLLALDGGKRHYPVVVYNNQRMCYSFKYGVVTRRVGRCRS*GPRLHQNLLTIPSQCTN  1274

Range 5: 1108 to 1734 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
457.9 bits(993) 0.0 204/209(98%) 0/209(0%) Minus/Minus
Query      141  KRKMRSNDVCKFLPSASHC*TNTTLW*CSRTPFRACSTTLYVVRQHHTLGPYSQ*NLQL*PYPAR*GRT*QCYP*HKNILSYERLHPKFWPKQRCS*H**ER*EPC*TTSLSAXXXXRSHRPHLY*RKGQTSEWPSPPTTVVEQIALVLVLPAYSEVVHGRQQLLA*QPIVTLAVWASAHLV*QPV*AARA*QG*TALPGGSVQQSTHV  767
                KRKMRSNDVCKFLPSASHC*TNTTLW*CSRTPFRACSTTLY VRQHHTLGPYSQ*NLQL*PYPAR*GRT*QCYP*HKNILSYERLHP+FWPKQRCS* **ER*EPC*T SLSAR*RRRSHRPHLY*RKGQTSEWPSPPTTVVEQIALVLVLPAYSEVVHGRQQLLA*QPIVTLAVWASAHLV*QPV*AARA*+G*TALPGGSVQQSTHV
Subject   1108  KRKMRSNDVCKFLPSASHC*TNTTLW*CSRTPFRACSTTLYAVRQHHTLGPYSQ*NLQL*PYPAR*GRT*QCYP*HKNILSYERLHPRFWPKQRCS*L**ER*EPC*TISLSAR*RRRSHRPHLY*RKGQTSEWPSPPTTVVEQIALVLVLPAYSEVVHGRQQLLA*QPIVTLAVWASAHLV*QPV*AARA*RG*TALPGGSVQQSTHV  1734

Range 6: 1409 to 1735 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
244.4 bits(527) 0.0 106/109(97%) 0/109(0%) Plus/Plus
Query      442  VVQQGS*RSYQC*EHLCLGQNLG*SLS*ERIFLCQG*HC*VLPYRAG*GYN*RFHCEYGPRV*CCLTTYRVVEHARKGVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLF  768
                +VQQGS*RSYQ *EHLCLGQNLG*SLS*ERIFLCQG*HC*VLPYRAG*GYN*RFHCEYGPRV*CCLT YRVVEHARKGVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLF
Subject   1409  IVQQGS*RSYQS*EHLCLGQNLG*SLS*ERIFLCQG*HC*VLPYRAG*GYN*RFHCEYGPRV*CCLTAYRVVEHARKGVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLF  1735

Range 7: 1100 to 1360 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
212.8 bits(458) 0.0 86/87(99%) 0/87(0%) Plus/Plus
Query      133  SCNTCVDCCTLPPGSAVYPCQARAA*TGCQTR*AEAQTASVTMGC*ANSCWRPCTTSE*AGSTKTSAICSTTVVGGEGHSDVWPFLQ  393
                SCNTCVDCCTLPPGSAVYP QARAA*TGCQTR*AEAQTASVTMGC*ANSCWRPCTTSE*AGSTKTSAICSTTVVGGEGHSDVWPFLQ
Subject   1100  SCNTCVDCCTLPPGSAVYPRQARAA*TGCQTR*AEAQTASVTMGC*ANSCWRPCTTSE*AGSTKTSAICSTTVVGGEGHSDVWPFLQ  1360

Range 8: 1036 to 1734 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
431.8 bits(936) 0.0 220/233(94%) 0/233(0%) Plus/Plus
Query       69  *WRRGPQLLQFPTRLVTTPCLKL*HMR*LLYTTTG*CRXXXXXXXXXXXXXNKMSRSPNGKRHNGLLSQQLLASMYHFRISRKHQNQRNLFHNSRWRRRPL*RLAFSSVKVGAMRXXXXXXXXXXXXTGLLTFLSMLRTPLFGPKFGMKPLVGEDIFMSRIAXXXXXXXCGVGLQLKISL*IRPQGVMLPYHV*SCGACAKGRS*ALPKGGVGLTMRG*GEKFTDVVASHLPF  767
                *WRRGPQLL  PTRLVTTP LKL*HMR*LLYTTTG*CRLP SSASSLN LSNKMSRSPNGK HNGLLSQQLLASMYHFRISRKHQNQR+LFHNSRWRRRPL*RLAFSSVKVGAMRA  SSCGKG+CSTGLLTFLS LRTPLFGPK GMKPLVGEDIFMSRIALLSSSLSCGVGLQLKISL*IRPQGVMLPY V*SCGACAKGRS*ALPKGGVGLTMRG*GEKFTDVVASHLPF
Subject   1036  *WRRGPQLLHLPTRLVTTPYLKL*HMR*LLYTTTG*CRLPPSSASSLNRLSNKMSRSPNGKCHNGLLSQQLLASMYHFRISRKHQNQRDLFHNSRWRRRPL*RLAFSSVKVGAMRATPSSCGKGNCSTGLLTFLSKLRTPLFGPKSGMKPLVGEDIFMSRIALLSSSLSCGVGLQLKISL*IRPQGVMLPYRV*SCGACAKGRS*ALPKGGVGLTMRG*GEKFTDVVASHLPF  1734

Nucleotide Sequence (822 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
83
166
249
332
415
498
581
664
747
822

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
633.9 3437.6 25% 8.63e-180 97% KX701860.1
632.0 3434.9 22% 3.055e-179 97% GQ352632.1
629.3 3426.2 22% 2.034e-178 95% KX756668.1
628.8 3106.3 22% 2.79e-178 80% JX559645.1
628.8 3102.2 22% 2.79e-178 82% GQ352631.1

Alignments

Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome

Sequence ID: KX701860.1 Length: 18020 Number of Matches: 13

Range 1: 10930 to 11748 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
633.9 bits(1384) 0.0 271/273(99%) 0/273(0%) Plus/Plus
Query        3  AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEDVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDNTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGSGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPKETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSN  821
                AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVE VDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDNTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGSGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPKETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILH+KAFTRKNLSN
Subject  10930  AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDNTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGSGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPKETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHNKAFTRKNLSN  11748

Range 2: 10928 to 11749 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
584.8 bits(1270) 0.0 269/274(98%) 0/274(0%) Minus/Minus
Query        1  CYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSRIYRPTNLVRLLSRVPDIHSLLPHR*Q*QIPYRLWIN*IALRRSLLGLPYVSIRPGTSVHLEKPCYSPLQIYRTPHLHYPLCICECMNRVLDYLSGKLXXXXXXXXXPLAYSSKCPPVSVRYYLPKYHSKP*PHRLPNT*NQYCRTQP*ISAANWLHHS*P*LEHLTPQS*QQ*QGLDKSCQDRF*TLPQP*R*MAQQLRLVRR*SNXXXXXXXLRG*GVAL*RYC*TSLPSSRIRISLTWH  822
                CY GFSS*KPY AKYSVWSSTLVLP*PLNLLSRIYRPTNLVRLLSRVPDIHSLLPHR*Q*QIPYRLWIN*IALRRSLLGLPYVSIRPGTSVHLEKPCYSPLQIYRTPHLHYPLCICECMNRVLDYLSGKLPPVESPPPRPLAYSSKCPPVSVRYYLPKYHSKP*PHRLPNT*NQYCRTQP*ISAANW HHS*P*LEHLTPQS*QQ*QGLDKSCQDRF*TLPQP*R*MAQQLRLVRR*SN  PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH
Subject  10928  CYLGFSS*KPYCAKYSVWSSTLVLP*PLNLLSRIYRPTNLVRLLSRVPDIHSLLPHR*Q*QIPYRLWIN*IALRRSLLGLPYVSIRPGTSVHLEKPCYSPLQIYRTPHLHYPLCICECMNRVLDYLSGKLPPVESPPPRPLAYSSKCPPVSVRYYLPKYHSKP*PHRLPNT*NQYCRTQP*ISAANWPHHS*P*LEHLTPQS*QQ*QGLDKSCQDRF*TLPQP*R*MAQQLRLVRR*SNLQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH  11749

Range 3: 11440 to 11748 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
248.5 bits(536) 0.0 102/103(99%) 0/103(0%) Minus/Minus
Query      513  VTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPGFIDQRI*YVCCPGYQIFILYFLTVNNNRYRTVCG*IKLRYVGLFWVSPTFRYAPERRFI*KSPVILPFKY  821
                VT VFPRESLIVQNIQCGQVLWYCLSL*IFSPGFIDQRI*YVCCPGYQIFILYFLTVNNNRYRTVCG*IKLRYVGLFWVSPTFRYAPERRFI*KSPVILPFKY
Subject  11440  VT*VFPRESLIVQNIQCGQVLWYCLSL*IFSPGFIDQRI*YVCCPGYQIFILYFLTVNNNRYRTVCG*IKLRYVGLFWVSPTFRYAPERRFI*KSPVILPFKY  11748

Range 4: 11170 to 11388 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
177.9 bits(382) 0.0 72/73(99%) 0/73(0%) Minus/Minus
Query      243  GYWTTFRENYHRLKVHHLVR*RIRQSVHQSQSAITCQNITVNLSPTGYRTPKISIVEHNLRYLRQIGYITPDL  461
                GYWTTFRENYHRLKVHHLVR*RIRQSVHQSQSAITCQNITVNLSPTGYRTPKISIVEHNLRYLRQIG+ITPDL
Subject  11170  GYWTTFRENYHRLKVHHLVR*RIRQSVHQSQSAITCQNITVNLSPTGYRTPKISIVEHNLRYLRQIGHITPDL  11388

Range 5: 10930 to 11130 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
162.4 bits(348) 0.0 65/67(97%) 0/67(0%) Minus/Minus
Query        3  RVWIKVVKTGFEHFHSPSAEWRNNCV*FVASQIHILHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG  203
                RVWIKVVKTGFEHFHSPSAEWRNNCV*FVASQI+ LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG
Subject  10930  RVWIKVVKTGFEHFHSPSAEWRNNCV*FVASQIYNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG  11130

Range 6: 11058 to 11747 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
504.2 bits(1094) 0.0 227/230(99%) 0/230(0%) Plus/Plus
Query      131  NCCAIQR*GCGSVQNRS*QLLSRPCYCCYDWGVKCSS*GQE*CSQFAADI*GCVRQY*F*VFGSLWG*GLL*YFGR**RTETGGHFDEYANXXXXXXXXXXNFPER*SNTLFIHSQIHSG*WRCGVRYI*RGE*QGFSK*TDVPGRIET*GRPKRDRRSAI*FIHRRYGICYC*R*GSKE*ISGTRDNKRTRFVGL*IRERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*  820
                NCCAIQR*GCGSVQNRS*QLLSRPCYCCYDWGVKCSS*GQE*C QFAADI*GCVRQY*F*VFGSLWG*GLL*YFGR**RTETGGHFDEYANGRGGGLSTGGNFPER*SNTLFIHSQIHSG*WRCGVRYI*RGE*QGFSK*TDVPGRIET*GRPKRDRRSAI*FIHRRYGICYC*R*GSKE*ISGTRDNKRTRFVGL*IRERRFRG*GNTRVLDHTEYFA+*GFHEEKP+*
Subject  11058  NCCAIQR*GCGSVQNRS*QLLSRPCYCCYDWGVKCSS*GQE*CGQFAADI*GCVRQY*F*VFGSLWG*GLL*YFGR**RTETGGHFDEYANGRGGGLSTGGNFPER*SNTLFIHSQIHSG*WRCGVRYI*RGE*QGFSK*TDVPGRIET*GRPKRDRRSAI*FIHRRYGICYC*R*GSKE*ISGTRDNKRTRFVGL*IRERRFRG*GNTRVLDHTEYFAQ*GFHEEKPK*  11747

Range 7: 10929 to 11006 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.9 bits(131) 0.0 26/26(100%) 0/26(0%) Plus/Plus
Query        2  CQVRDIRILDEGRLV*Q*RYNATPYP  79
                CQVRDIRILDEGRLV*Q*RYNATPYP
Subject  10929  CQVRDIRILDEGRLV*Q*RYNATPYP  11006

Range 8: 11363 to 11749 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
305.8 bits(661) 0.0 129/129(100%) 0/129(0%) Plus/Plus
Query      436  FSRKVVQYPVHTLTDTQWVVEMWCTVYLKGRITGLF*MNRRSGAYRNVGETQKRPT*RNLIYPQTVRYLLLLTVRK*RMNIWYPGQQTY*IRWSINPGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VT  822
                FSRKVVQYPVHTLTDTQWVVEMWCTVYLKGRITGLF*MNRRSGAYRNVGETQKRPT*RNLIYPQTVRYLLLLTVRK*RMNIWYPGQQTY*IRWSINPGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VT
Subject  11363  FSRKVVQYPVHTLTDTQWVVEMWCTVYLKGRITGLF*MNRRSGAYRNVGETQKRPT*RNLIYPQTVRYLLLLTVRK*RMNIWYPGQQTY*IRWSINPGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VT  11749

Range 9: 10928 to 11128 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
149.1 bits(319) 0.0 65/67(97%) 0/67(0%) Plus/Plus
Query        1  MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRMWI*LATN*TQLLRHSALGLWKCSKPVLTTFIQT  201
                MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWR+ I*LATN*TQLLRHSALGLWKCSKPVLTTFIQT
Subject  10928  MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRL*I*LATN*TQLLRHSALGLWKCSKPVLTTFIQT  11128

Range 10: 11171 to 11302 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
100.0 bits(212) 0.0 43/44(98%) 0/44(0%) Plus/Plus
Query      244  RSGVM*PICRRYLRLCSTILILGVR*PVGLRFTVIFWQVIAD*D  375
                RSGVM PICRRYLRLCSTILILGVR*PVGLRFTVIFWQVIAD*D
Subject  11171  RSGVMWPICRRYLRLCSTILILGVR*PVGLRFTVIFWQVIAD*D  11302

Range 11: 11361 to 11747 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
296.6 bits(641) 0.0 128/129(99%) 0/129(0%) Minus/Minus
Query      434  LLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVDKLNCATSVSFGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPLPTVYL*VYEQGIGLPFGKI  820
                LLRFFLVKAL CKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVDKLNCATSVSFGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPLPTVYL*VYEQGIGLPFGKI
Subject  11361  LLRFFLVKALLCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVDKLNCATSVSFGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPLPTVYL*VYEQGIGLPFGKI  11747

Range 12: 11055 to 11294 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
147.7 bits(316) 0.0 80/80(100%) 0/80(0%) Minus/Minus
Query      128  PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKXXXXXXXXXXXLDPPVITAITGSG*KLSRPVLNTSTALALNGATIA  367
                PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA
Subject  11055  PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA  11294

Range 13: 10929 to 11006 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.8 bits(133) 0.0 26/26(100%) 0/26(0%) Minus/Minus
Query        2  GIRCCVIALLLDKSSFIEDTNIPNLA  79
                GIRCCVIALLLDKSSFIEDTNIPNLA
Subject  10929  GIRCCVIALLLDKSSFIEDTNIPNLA  11006

Grapevine leafroll associated virus 3 isolate 623, complete genome

Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 13

Range 1: 11412 to 12230 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
632.0 bits(1380) 0.0 270/273(99%) 0/273(0%) Plus/Plus
Query        3  AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEDVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDNTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGSGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPKETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSN  821
                AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVE VDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDNTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVG GDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPKETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILH+KAFTRKNLSN
Subject  11412  AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDNTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPKETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHNKAFTRKNLSN  12230

Range 2: 11843 to 12229 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
293.4 bits(634) 0.0 127/129(98%) 0/129(0%) Minus/Minus
Query      434  LLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVDKLNCATSVSFGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPLPTVYL*VYEQGIGLPFGKI  820
                LLRFFLVKAL CKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVDKLNCATSVSFGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSP PTVYL*VYEQGIGLPFGKI
Subject  11843  LLRFFLVKALLCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVDKLNCATSVSFGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI  12229

Range 3: 11652 to 11870 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
175.2 bits(376) 0.0 71/73(97%) 0/73(0%) Minus/Minus
Query      243  GYWTTFRENYHRLKVHHLVR*RIRQSVHQSQSAITCQNITVNLSPTGYRTPKISIVEHNLRYLRQIGYITPDL  461
                GYWTTFRENY+RLKVHHLVR*RIRQSVHQSQSAITCQNITVNLSPTGYRTPKISIVEHNLRYLRQIG+ITPDL
Subject  11652  GYWTTFRENYYRLKVHHLVR*RIRQSVHQSQSAITCQNITVNLSPTGYRTPKISIVEHNLRYLRQIGHITPDL  11870

Range 4: 11412 to 11612 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
165.1 bits(354) 0.0 66/67(99%) 0/67(0%) Minus/Minus
Query        3  RVWIKVVKTGFEHFHSPSAEWRNNCV*FVASQIHILHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG  203
                RVWIKVVKTGFEHFHSPSAEWRNNCV*FVASQIH LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG
Subject  11412  RVWIKVVKTGFEHFHSPSAEWRNNCV*FVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG  11612

Range 5: 11410 to 12231 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
582.5 bits(1265) 0.0 268/274(98%) 0/274(0%) Minus/Minus
Query        1  CYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSRIYRPTNLVRLLSRVPDIHSLLPHR*Q*QIPYRLWIN*IALRRSLLGLPYVSIRPGTSVHLEKPCYSPLQIYRTPHLHYPLCICECMNRVLDYLSGKLXXXXXXXXXPLAYSSKCPPVSVRYYLPKYHSKP*PHRLPNT*NQYCRTQP*ISAANWLHHS*P*LEHLTPQS*QQ*QGLDKSCQDRF*TLPQP*R*MAQQLRLVRR*SNXXXXXXXLRG*GVAL*RYC*TSLPSSRIRISLTWH  822
                CY GFSS*KPY AKYSVWSSTLVLP*PLNLLSRIYRPTNLVRLLSRVPDIHSLLPHR*Q*QIPYRLWIN*IALRRSLLGLPYVSIRPGTSVHLEKPCYSPLQIYRTPHLH+PLCICECMNRVLDYLSGKL PVESPPPRPLAYSSKCPPVSVRYYLPKYHSKP*PHRLPNT*NQYCRTQP*ISAANW HHS*P*LEHLTPQS*QQ*QGLDKSCQDRF*TLPQP*R*MAQQLRLVRR*SNP PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH
Subject  11410  CYLGFSS*KPYCAKYSVWSSTLVLP*PLNLLSRIYRPTNLVRLLSRVPDIHSLLPHR*Q*QIPYRLWIN*IALRRSLLGLPYVSIRPGTSVHLEKPCYSPLQIYRTPHLHHPLCICECMNRVLDYLSGKLLPVESPPPRPLAYSSKCPPVSVRYYLPKYHSKP*PHRLPNT*NQYCRTQP*ISAANWPHHS*P*LEHLTPQS*QQ*QGLDKSCQDRF*TLPQP*R*MAQQLRLVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH  12231

Range 6: 11540 to 12229 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
501.9 bits(1089) 0.0 225/230(98%) 0/230(0%) Plus/Plus
Query      131  NCCAIQR*GCGSVQNRS*QLLSRPCYCCYDWGVKCSS*GQE*CSQFAADI*GCVRQY*F*VFGSLWG*GLL*YFGR**RTETGGHFDEYANXXXXXXXXXXNFPER*SNTLFIHSQIHSG*WRCGVRYI*RGE*QGFSK*TDVPGRIET*GRPKRDRRSAI*FIHRRYGICYC*R*GSKE*ISGTRDNKRTRFVGL*IRERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*  820
                NCCAIQR*GCGSVQNRS*QLLSRPCYCCYDWGVKCSS*GQE*C QFAADI*GCVRQY*F*VFGSLWG*GLL*YFGR**RTETGGHFDEYANGRGGGLSTG NFPER*SNTLFIHSQIHSG WRCGVRYI*RGE*QGFSK*TDVPGRIET*GRPKRDRRSAI*FIHRRYGICYC*R*GSKE*ISGTRDNKRTRFVGL*IRERRFRG*GNTRVLDHTEYFA+*GFHEEKP+*
Subject  11540  NCCAIQR*GCGSVQNRS*QLLSRPCYCCYDWGVKCSS*GQE*CGQFAADI*GCVRQY*F*VFGSLWG*GLL*YFGR**RTETGGHFDEYANGRGGGLSTGSNFPER*SNTLFIHSQIHSGWWRCGVRYI*RGE*QGFSK*TDVPGRIET*GRPKRDRRSAI*FIHRRYGICYC*R*GSKE*ISGTRDNKRTRFVGL*IRERRFRG*GNTRVLDHTEYFAQ*GFHEEKPK*  12229

Range 7: 11411 to 11488 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.9 bits(131) 0.0 26/26(100%) 0/26(0%) Plus/Plus
Query        2  CQVRDIRILDEGRLV*Q*RYNATPYP  79
                CQVRDIRILDEGRLV*Q*RYNATPYP
Subject  11411  CQVRDIRILDEGRLV*Q*RYNATPYP  11488

Range 8: 11845 to 12231 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
305.8 bits(661) 0.0 129/129(100%) 0/129(0%) Plus/Plus
Query      436  FSRKVVQYPVHTLTDTQWVVEMWCTVYLKGRITGLF*MNRRSGAYRNVGETQKRPT*RNLIYPQTVRYLLLLTVRK*RMNIWYPGQQTY*IRWSINPGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VT  822
                FSRKVVQYPVHTLTDTQWVVEMWCTVYLKGRITGLF*MNRRSGAYRNVGETQKRPT*RNLIYPQTVRYLLLLTVRK*RMNIWYPGQQTY*IRWSINPGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VT
Subject  11845  FSRKVVQYPVHTLTDTQWVVEMWCTVYLKGRITGLF*MNRRSGAYRNVGETQKRPT*RNLIYPQTVRYLLLLTVRK*RMNIWYPGQQTY*IRWSINPGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VT  12231

Range 9: 11410 to 11610 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
155.9 bits(334) 0.0 66/67(99%) 0/67(0%) Plus/Plus
Query        1  MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRMWI*LATN*TQLLRHSALGLWKCSKPVLTTFIQT  201
                MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWR+WI*LATN*TQLLRHSALGLWKCSKPVLTTFIQT
Subject  11410  MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATN*TQLLRHSALGLWKCSKPVLTTFIQT  11610

Range 10: 11653 to 11784 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
100.0 bits(212) 0.0 43/44(98%) 0/44(0%) Plus/Plus
Query      244  RSGVM*PICRRYLRLCSTILILGVR*PVGLRFTVIFWQVIAD*D  375
                RSGVM PICRRYLRLCSTILILGVR*PVGLRFTVIFWQVIAD*D
Subject  11653  RSGVMWPICRRYLRLCSTILILGVR*PVGLRFTVIFWQVIAD*D  11784

Range 11: 11922 to 12230 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
248.5 bits(536) 0.0 102/103(99%) 0/103(0%) Minus/Minus
Query      513  VTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPGFIDQRI*YVCCPGYQIFILYFLTVNNNRYRTVCG*IKLRYVGLFWVSPTFRYAPERRFI*KSPVILPFKY  821
                VT VFPRESLIVQNIQCGQVLWYCLSL*IFSPGFIDQRI*YVCCPGYQIFILYFLTVNNNRYRTVCG*IKLRYVGLFWVSPTFRYAPERRFI*KSPVILPFKY
Subject  11922  VT*VFPRESLIVQNIQCGQVLWYCLSL*IFSPGFIDQRI*YVCCPGYQIFILYFLTVNNNRYRTVCG*IKLRYVGLFWVSPTFRYAPERRFI*KSPVILPFKY  12230

Range 12: 11537 to 11776 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
147.7 bits(316) 0.0 80/80(100%) 0/80(0%) Minus/Minus
Query      128  PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKXXXXXXXXXXXLDPPVITAITGSG*KLSRPVLNTSTALALNGATIA  367
                PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA
Subject  11537  PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA  11776

Range 13: 11411 to 11488 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.8 bits(133) 0.0 26/26(100%) 0/26(0%) Minus/Minus
Query        2  GIRCCVIALLLDKSSFIEDTNIPNLA  79
                GIRCCVIALLLDKSSFIEDTNIPNLA
Subject  11411  GIRCCVIALLLDKSSFIEDTNIPNLA  11488

Grapevine leafroll associated virus 3 isolate TC BR, complete genome

Sequence ID: KX756668.1 Length: 18498 Number of Matches: 13

Range 1: 11412 to 12230 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
629.3 bits(1374) 0.0 269/273(99%) 0/273(0%) Plus/Plus
Query        3  AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEDVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDNTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGSGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPKETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSN  821
                AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVE VDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDNTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVD QPVVIFPKGSPIPCSYTHRYTVG GDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPKETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILH+KAFTRKNLSN
Subject  11412  AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDNTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDLQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPKETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHNKAFTRKNLSN  12230

Range 2: 11843 to 12229 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
293.4 bits(634) 0.0 127/129(98%) 0/129(0%) Minus/Minus
Query      434  LLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVDKLNCATSVSFGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPLPTVYL*VYEQGIGLPFGKI  820
                LLRFFLVKAL CKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVDKLNCATSVSFGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSP PTVYL*VYEQGIGLPFGKI
Subject  11843  LLRFFLVKALLCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVDKLNCATSVSFGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI  12229

Range 3: 11652 to 11870 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
175.2 bits(376) 0.0 71/73(97%) 0/73(0%) Minus/Minus
Query      243  GYWTTFRENYHRLKVHHLVR*RIRQSVHQSQSAITCQNITVNLSPTGYRTPKISIVEHNLRYLRQIGYITPDL  461
                GYWTTFRENYHRLKVHHLVR*RIRQSVHQSQSAITCQNITVNLSPT YRTPKISIVEHNLRYLRQIG+ITPDL
Subject  11652  GYWTTFRENYHRLKVHHLVR*RIRQSVHQSQSAITCQNITVNLSPTSYRTPKISIVEHNLRYLRQIGHITPDL  11870

Range 4: 11412 to 11612 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
165.1 bits(354) 0.0 66/67(99%) 0/67(0%) Minus/Minus
Query        3  RVWIKVVKTGFEHFHSPSAEWRNNCV*FVASQIHILHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG  203
                RVWIKVVKTGFEHFHSPSAEWRNNCV*FVASQIH LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG
Subject  11412  RVWIKVVKTGFEHFHSPSAEWRNNCV*FVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG  11612

Range 5: 11410 to 12231 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
581.2 bits(1262) 0.0 267/274(97%) 0/274(0%) Minus/Minus
Query        1  CYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSRIYRPTNLVRLLSRVPDIHSLLPHR*Q*QIPYRLWIN*IALRRSLLGLPYVSIRPGTSVHLEKPCYSPLQIYRTPHLHYPLCICECMNRVLDYLSGKLXXXXXXXXXPLAYSSKCPPVSVRYYLPKYHSKP*PHRLPNT*NQYCRTQP*ISAANWLHHS*P*LEHLTPQS*QQ*QGLDKSCQDRF*TLPQP*R*MAQQLRLVRR*SNXXXXXXXLRG*GVAL*RYC*TSLPSSRIRISLTWH  822
                CY GFSS*KPY AKYSVWSSTLVLP*PLNLLSRIYRPTNLVRLLSRVPDIHSLLPHR*Q*QIPYRLWIN*IALRRSLLGLPYVSIRPGTSVHLEKPCYSPLQIYRTPHLH+PLCICECMNRVLDYLSGKLPPVE PPPRPLAYSSKCPPVSVRYYLPKYHSKP*PH+LPNT*NQYCRTQP*ISAANW HHS*P*LEHLTPQS*QQ*QGLDKSCQDRF*TLPQP*R*MAQQLRLVRR*SNP PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH
Subject  11410  CYLGFSS*KPYCAKYSVWSSTLVLP*PLNLLSRIYRPTNLVRLLSRVPDIHSLLPHR*Q*QIPYRLWIN*IALRRSLLGLPYVSIRPGTSVHLEKPCYSPLQIYRTPHLHHPLCICECMNRVLDYLSGKLPPVEGPPPRPLAYSSKCPPVSVRYYLPKYHSKP*PHKLPNT*NQYCRTQP*ISAANWPHHS*P*LEHLTPQS*QQ*QGLDKSCQDRF*TLPQP*R*MAQQLRLVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH  12231

Range 6: 11540 to 12229 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
501.9 bits(1089) 0.0 225/230(98%) 0/230(0%) Plus/Plus
Query      131  NCCAIQR*GCGSVQNRS*QLLSRPCYCCYDWGVKCSS*GQE*CSQFAADI*GCVRQY*F*VFGSLWG*GLL*YFGR**RTETGGHFDEYANXXXXXXXXXXNFPER*SNTLFIHSQIHSG*WRCGVRYI*RGE*QGFSK*TDVPGRIET*GRPKRDRRSAI*FIHRRYGICYC*R*GSKE*ISGTRDNKRTRFVGL*IRERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*  820
                NCCAIQR*GCGSVQNRS*QLLSRPCYCCYDWGVKCSS*GQE*C QFAADI*GCVRQY*F*VFGSLWG*GLL*YFGR**RTETGGHFDEYANGRGGG STGGNFPER*SNTLFIHSQIHSG WRCGVRYI*RGE*QGFSK*TDVPGRIET*GRPKRDRRSAI*FIHRRYGICYC*R*GSKE*ISGTRDNKRTRFVGL*IRERRFRG*GNTRVLDHTEYFA+*GFHEEKP+*
Subject  11540  NCCAIQR*GCGSVQNRS*QLLSRPCYCCYDWGVKCSS*GQE*CGQFAADI*GCVRQY*F*VFGSLWG*GLL*YFGR**RTETGGHFDEYANGRGGGPSTGGNFPER*SNTLFIHSQIHSGWWRCGVRYI*RGE*QGFSK*TDVPGRIET*GRPKRDRRSAI*FIHRRYGICYC*R*GSKE*ISGTRDNKRTRFVGL*IRERRFRG*GNTRVLDHTEYFAQ*GFHEEKPK*  12229

Range 7: 11411 to 11488 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.9 bits(131) 0.0 26/26(100%) 0/26(0%) Plus/Plus
Query        2  CQVRDIRILDEGRLV*Q*RYNATPYP  79
                CQVRDIRILDEGRLV*Q*RYNATPYP
Subject  11411  CQVRDIRILDEGRLV*Q*RYNATPYP  11488

Range 8: 11845 to 12231 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
305.8 bits(661) 0.0 129/129(100%) 0/129(0%) Plus/Plus
Query      436  FSRKVVQYPVHTLTDTQWVVEMWCTVYLKGRITGLF*MNRRSGAYRNVGETQKRPT*RNLIYPQTVRYLLLLTVRK*RMNIWYPGQQTY*IRWSINPGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VT  822
                FSRKVVQYPVHTLTDTQWVVEMWCTVYLKGRITGLF*MNRRSGAYRNVGETQKRPT*RNLIYPQTVRYLLLLTVRK*RMNIWYPGQQTY*IRWSINPGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VT
Subject  11845  FSRKVVQYPVHTLTDTQWVVEMWCTVYLKGRITGLF*MNRRSGAYRNVGETQKRPT*RNLIYPQTVRYLLLLTVRK*RMNIWYPGQQTY*IRWSINPGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VT  12231

Range 9: 11410 to 11610 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
155.9 bits(334) 0.0 66/67(99%) 0/67(0%) Plus/Plus
Query        1  MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRMWI*LATN*TQLLRHSALGLWKCSKPVLTTFIQT  201
                MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWR+WI*LATN*TQLLRHSALGLWKCSKPVLTTFIQT
Subject  11410  MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATN*TQLLRHSALGLWKCSKPVLTTFIQT  11610

Range 10: 11653 to 11784 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
95.5 bits(202) 0.0 42/44(95%) 0/44(0%) Plus/Plus
Query      244  RSGVM*PICRRYLRLCSTILILGVR*PVGLRFTVIFWQVIAD*D  375
                RSGVM PICRRYLRLCSTILILGVR* VGLRFTVIFWQVIAD*D
Subject  11653  RSGVMWPICRRYLRLCSTILILGVR*LVGLRFTVIFWQVIAD*D  11784

Range 11: 11922 to 12230 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
248.5 bits(536) 0.0 102/103(99%) 0/103(0%) Minus/Minus
Query      513  VTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPGFIDQRI*YVCCPGYQIFILYFLTVNNNRYRTVCG*IKLRYVGLFWVSPTFRYAPERRFI*KSPVILPFKY  821
                VT VFPRESLIVQNIQCGQVLWYCLSL*IFSPGFIDQRI*YVCCPGYQIFILYFLTVNNNRYRTVCG*IKLRYVGLFWVSPTFRYAPERRFI*KSPVILPFKY
Subject  11922  VT*VFPRESLIVQNIQCGQVLWYCLSL*IFSPGFIDQRI*YVCCPGYQIFILYFLTVNNNRYRTVCG*IKLRYVGLFWVSPTFRYAPERRFI*KSPVILPFKY  12230

Range 12: 11537 to 11776 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
147.7 bits(316) 0.0 80/80(100%) 0/80(0%) Minus/Minus
Query      128  PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKXXXXXXXXXXXLDPPVITAITGSG*KLSRPVLNTSTALALNGATIA  367
                PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA
Subject  11537  PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA  11776

Range 13: 11411 to 11488 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.8 bits(133) 0.0 26/26(100%) 0/26(0%) Minus/Minus
Query        2  GIRCCVIALLLDKSSFIEDTNIPNLA  79
                GIRCCVIALLLDKSSFIEDTNIPNLA
Subject  11411  GIRCCVIALLLDKSSFIEDTNIPNLA  11488

Grapevine leafroll associated virus 3 isolate 3138 07, complete genome

Sequence ID: JX559645.1 Length: 18498 Number of Matches: 13

Range 1: 11412 to 12230 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
628.8 bits(1373) 0.0 269/273(99%) 0/273(0%) Plus/Plus
Query        3  AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEDVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDNTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGSGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPKETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSN  821
                AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVE VDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFD+TDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVG GDVVYGIFEGENNRAFLNEPTFRGVSKRRGDP ETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSN
Subject  11412  AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSN  12230

Range 2: 11843 to 12229 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
289.3 bits(625) 0.0 125/129(97%) 0/129(0%) Minus/Minus
Query      434  LLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVDKLNCATSVSFGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPLPTVYL*VYEQGIGLPFGKI  820
                LLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSV++LNCATSVS GSPLRFDTPRNVGSFRKALLFSPSNIPYTTSP PTVYL*VYEQGIGLPFGKI
Subject  11843  LLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI  12229

Range 3: 11412 to 11612 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
150.9 bits(323) 0.0 60/67(90%) 0/67(0%) Minus/Minus
Query        3  RVWIKVVKTGFEHFHSPSAEWRNNCV*FVASQIHILHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG  203
                RVW+KVVKT FE+FHSPSAEW N+CV FVASQIH LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG
Subject  11412  RVWVKVVKTSFEYFHSPSAEWCNDCVQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG  11612

Range 4: 11652 to 11870 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
150.4 bits(322) 0.0 61/73(84%) 0/73(0%) Minus/Minus
Query      243  GYWTTFRENYHRLKVHHLVR*RIRQSVHQSQSAITCQNITVNLSPTGYRTPKISIVEHNLRYLRQIGYITPDL  461
                GYWTTFRENYHRLK+H+LVR*RIR SVHQSQSAITCQNI VNLSPT +RT KI  VEH+LRYLRQI +ITPDL
Subject  11652  GYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHITPDL  11870

Range 5: 11410 to 12231 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
499.6 bits(1084) 0.0 237/274(86%) 0/274(0%) Minus/Minus
Query        1  CYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSRIYRPTNLVRLLSRVPDIHSLLPHR*Q*QIPYRLWIN*IALRRSLLGLPYVSIRPGTSVHLEKPCYSPLQIYRTPHLHYPLCICECMNRVLDYLSGKLXXXXXXXXXPLAYSSKCPPVSVRYYLPKYHSKP*PHRLPNT*NQYCRTQP*ISAANWLHHS*P*LEHLTPQS*QQ*QGLDKSCQDRF*TLPQP*R*MAQQLRLVRR*SNXXXXXXXLRG*GVAL*RYC*TSLPSSRIRISLTWH  822
                CYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLS+IYRP N VRLLSRVPDIHSLLPH *+*Q P+R W +* A RRSLLGLPYVSIRPGTSVHLEK CYSPLQIYR PHLH+PLCI E MNRVLDYLSGKLPP E+P PRPLAYS KCPPVSVRYYLPKY SKP*PH+ PN *N+YCRT+P*ISAAN  HHS*P*LEHLTPQS*QQ* GL KSCQD+F* LPQP*R*M Q+LR VRR*SNP PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH
Subject  11410  CYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSKP*PHKPPNI*NRYCRTRP*ISAAN*PHHS*P*LEHLTPQS*QQ*PGLGKSCQDQF*ILPQP*R*MVQRLRPVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH  12231

Range 6: 11540 to 12229 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
423.1 bits(917) 0.0 195/230(85%) 0/230(0%) Plus/Plus
Query      131  NCCAIQR*GCGSVQNRS*QLLSRPCYCCYDWGVKCSS*GQE*CSQFAADI*GCVRQY*F*VFGSLWG*GLL*YFGR**RTETGGHFDEYANXXXXXXXXXXNFPER*SNTLFIHSQIHSG*WRCGVRYI*RGE*QGFSK*TDVPGRIET*GRPKRDRRSAI*FIHRRYGICYC*R*GSKE*ISGTRDNKRTRFVGL*IRERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*  820
                N C IQR*GCGS+QN S*QLL RP YCCYDWGVKCSS*GQE*C  FAADI*G VRQY F*+FG LWG*GLL YFGR**RTETGGHF+EYANGRG G S GGNFPER*SNTLFI+S IHSG WRCG+RYI*RGE*Q FSK*TDVPGRIET*GRP RDRR A+* +H R G+CY * *GSKE*ISGTRDNKRT F+GL*I ERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*
Subject  11540  NRCTIQR*GCGSIQNWS*QLLPRPGYCCYDWGVKCSS*GQE*CG*FAADI*GRVRQYRF*MFGGLWG*GLLRYFGR**RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*  12229

Range 7: 11411 to 11488 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.9 bits(131) 0.0 26/26(100%) 0/26(0%) Plus/Plus
Query        2  CQVRDIRILDEGRLV*Q*RYNATPYP  79
                CQVRDIRILDEGRLV*Q*RYNATPYP
Subject  11411  CQVRDIRILDEGRLV*Q*RYNATPYP  11488

Range 8: 11845 to 12231 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
255.4 bits(551) 0.0 113/129(88%) 0/129(0%) Plus/Plus
Query      436  FSRKVVQYPVHTLTDTQWVVEMWCTVYLKGRITGLF*MNRRSGAYRNVGETQKRPT*RNLIYPQTVRYLLLLTVRK*RMNIWYPGQQTY*IRWSINPGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VT  822
                FSRKVVQYPVH L DTQWVVEMW TVYLKGRIT LF*MNRRSGAYRNVGETQ RPT R+LI P+T R LL L VRK*RMNIWYPGQQTY I WSIN GEKI*RLRQYQST*PH*IFCTIRLSRGKT*VT
Subject  11845  FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VT  12231

Range 9: 11410 to 11610 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
136.7 bits(292) 0.0 60/67(90%) 0/67(0%) Plus/Plus
Query        1  MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRMWI*LATN*TQLLRHSALGLWKCSKPVLTTFIQT  201
                MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWR+WI*LATN TQ L HSALGLWK SK VLTTF QT
Subject  11410  MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNWTQSLHHSALGLWKYSKLVLTTFTQT  11610

Range 10: 11653 to 11784 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
77.1 bits(162) 0.0 35/44(80%) 0/44(0%) Plus/Plus
Query      244  RSGVM*PICRRYLRLCSTILILGVR*PVGLRFTVIFWQVIAD*D  375
                RSGVM  ICRRYLR CST+ IL VR  VGLRFT IFWQVIAD*D
Subject  11653  RSGVMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*D  11784

Range 11: 11922 to 12230 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
220.5 bits(475) 0.0 91/103(88%) 0/103(0%) Minus/Minus
Query      513  VTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPGFIDQRI*YVCCPGYQIFILYFLTVNNNRYRTVCG*IKLRYVGLFWVSPTFRYAPERRFI*KSPVILPFKY  821
                VTQVFPRESLIVQNIQCGQVLWYCLSL*IFSP FIDQ I YVCCPGYQIFILYFLT+N+NR+R+V G IKLR+VGL+WVSPTFRYAPERRFI*KS VILPFKY
Subject  11922  VTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKY  12230

Range 12: 11537 to 11776 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
147.7 bits(316) 0.0 80/80(100%) 0/80(0%) Minus/Minus
Query      128  PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKXXXXXXXXXXXLDPPVITAITGSG*KLSRPVLNTSTALALNGATIA  367
                PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA
Subject  11537  PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA  11776

Range 13: 11411 to 11488 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.8 bits(133) 0.0 26/26(100%) 0/26(0%) Minus/Minus
Query        2  GIRCCVIALLLDKSSFIEDTNIPNLA  79
                GIRCCVIALLLDKSSFIEDTNIPNLA
Subject  11411  GIRCCVIALLLDKSSFIEDTNIPNLA  11488

Grapevine leafroll associated virus 3 isolate 621, complete genome

Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 13

Range 1: 11412 to 12230 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
628.8 bits(1373) 0.0 269/273(99%) 0/273(0%) Plus/Plus
Query        3  AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEDVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDNTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGSGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPKETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSN  821
                AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVE VDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFD+TDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVG GDVVYGIFEGENNRAFLNEPTFRGVSKRRGDP ETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSN
Subject  11412  AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSN  12230

Range 2: 11843 to 12229 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
289.3 bits(625) 0.0 125/129(97%) 0/129(0%) Minus/Minus
Query      434  LLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVDKLNCATSVSFGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPLPTVYL*VYEQGIGLPFGKI  820
                LLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSV++LNCATSVS GSPLRFDTPRNVGSFRKALLFSPSNIPYTTSP PTVYL*VYEQGIGLPFGKI
Subject  11843  LLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI  12229

Range 3: 11652 to 11870 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
152.7 bits(327) 0.0 62/73(85%) 0/73(0%) Minus/Minus
Query      243  GYWTTFRENYHRLKVHHLVR*RIRQSVHQSQSAITCQNITVNLSPTGYRTPKISIVEHNLRYLRQIGYITPDL  461
                GYWTTFRENYHRLK+H+LVR*RIR SVHQSQSAITCQNITVNLSPT +RT KI  VEH+LRYLRQI +ITPDL
Subject  11652  GYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNITVNLSPTSHRTSKIGTVEHDLRYLRQISHITPDL  11870

Range 4: 11412 to 11612 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
150.9 bits(323) 0.0 60/67(90%) 0/67(0%) Minus/Minus
Query        3  RVWIKVVKTGFEHFHSPSAEWRNNCV*FVASQIHILHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG  203
                RVW+KVVKT FE+FHSPSAEW N+CV FVASQIH LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG
Subject  11412  RVWVKVVKTSFEYFHSPSAEWCNDCVQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG  11612

Range 5: 11410 to 12231 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
498.7 bits(1082) 0.0 237/274(86%) 0/274(0%) Minus/Minus
Query        1  CYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSRIYRPTNLVRLLSRVPDIHSLLPHR*Q*QIPYRLWIN*IALRRSLLGLPYVSIRPGTSVHLEKPCYSPLQIYRTPHLHYPLCICECMNRVLDYLSGKLXXXXXXXXXPLAYSSKCPPVSVRYYLPKYHSKP*PHRLPNT*NQYCRTQP*ISAANWLHHS*P*LEHLTPQS*QQ*QGLDKSCQDRF*TLPQP*R*MAQQLRLVRR*SNXXXXXXXLRG*GVAL*RYC*TSLPSSRIRISLTWH  822
                CYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLS+IYRP N VRLLSRVPDIHSLLPH *+*Q P+R W +* A RRSLLGLPYVSIRPGTSVHLEK CYSPLQIYR  HLH+PLCI E MNRVLDYLSGKLPP E+P PRPLAYS KCPPVSVRYYLPKYHSKP*PH+ PN *N+YCRT+P*ISAAN  HHS*P*LEHLTPQS*QQ* GL KSCQD+F* LPQP*R*M Q+LR VRR*SNP PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH
Subject  11410  CYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRILHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYHSKP*PHKPPNI*NRYCRTRP*ISAAN*PHHS*P*LEHLTPQS*QQ*PGLGKSCQDQF*ILPQP*R*MVQRLRPVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH  12231

Range 6: 11540 to 12229 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
422.6 bits(916) 0.0 195/230(85%) 0/230(0%) Plus/Plus
Query      131  NCCAIQR*GCGSVQNRS*QLLSRPCYCCYDWGVKCSS*GQE*CSQFAADI*GCVRQY*F*VFGSLWG*GLL*YFGR**RTETGGHFDEYANXXXXXXXXXXNFPER*SNTLFIHSQIHSG*WRCGVRYI*RGE*QGFSK*TDVPGRIET*GRPKRDRRSAI*FIHRRYGICYC*R*GSKE*ISGTRDNKRTRFVGL*IRERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*  820
                N C IQR*GCGS+QN S*QLL RP YCCYDWGVKCSS*GQE*C  FAADI*G VRQY F*+FG LWG*GLL*YFGR**RTETGGHF+EYANGRG G S GGNFPER*SNTLFI+S IHSG WRC +RYI*RGE*Q FSK*TDVPGRIET*GRP RDRR A+* +H R G+CY * *GSKE*ISGTRDNKRT F+GL*I ERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*
Subject  11540  NRCTIQR*GCGSIQNWS*QLLPRPGYCCYDWGVKCSS*GQE*CG*FAADI*GRVRQYRF*MFGGLWG*GLL*YFGR**RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCSIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*  12229

Range 7: 11411 to 11488 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.9 bits(131) 0.0 26/26(100%) 0/26(0%) Plus/Plus
Query        2  CQVRDIRILDEGRLV*Q*RYNATPYP  79
                CQVRDIRILDEGRLV*Q*RYNATPYP
Subject  11411  CQVRDIRILDEGRLV*Q*RYNATPYP  11488

Range 8: 11845 to 12231 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
248.5 bits(536) 0.0 112/129(87%) 0/129(0%) Plus/Plus
Query      436  FSRKVVQYPVHTLTDTQWVVEMWCTVYLKGRITGLF*MNRRSGAYRNVGETQKRPT*RNLIYPQTVRYLLLLTVRK*RMNIWYPGQQTY*IRWSINPGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VT  822
                FSRKVVQYPVH L DTQWVVEM  TVYLKGRIT LF*MNRRSGAYRNVGETQ RPT R+LI P+T R LL L VRK*RMNIWYPGQQTY I WSIN GEKI*RLRQYQST*PH*IFCTIRLSRGKT*VT
Subject  11845  FSRKVVQYPVHILIDTQWVVEM*YTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VT  12231

Range 9: 11410 to 11610 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
136.7 bits(292) 0.0 60/67(90%) 0/67(0%) Plus/Plus
Query        1  MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRMWI*LATN*TQLLRHSALGLWKCSKPVLTTFIQT  201
                MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWR+WI*LATN TQ L HSALGLWK SK VLTTF QT
Subject  11410  MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNWTQSLHHSALGLWKYSKLVLTTFTQT  11610

Range 10: 11653 to 11784 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.0 bits(166) 0.0 36/44(82%) 0/44(0%) Plus/Plus
Query      244  RSGVM*PICRRYLRLCSTILILGVR*PVGLRFTVIFWQVIAD*D  375
                RSGVM  ICRRYLR CST+ IL VR  VGLRFTVIFWQVIAD*D
Subject  11653  RSGVMWLICRRYLRSCSTVPILDVRWLVGLRFTVIFWQVIAD*D  11784

Range 11: 11922 to 12230 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
220.5 bits(475) 0.0 91/103(88%) 0/103(0%) Minus/Minus
Query      513  VTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPGFIDQRI*YVCCPGYQIFILYFLTVNNNRYRTVCG*IKLRYVGLFWVSPTFRYAPERRFI*KSPVILPFKY  821
                VTQVFPRESLIVQNIQCGQVLWYCLSL*IFSP FIDQ I YVCCPGYQIFILYFLT+N+NR+R+V G IKLR+VGL+WVSPTFRYAPERRFI*KS VILPFKY
Subject  11922  VTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKY  12230

Range 12: 11537 to 11776 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
147.7 bits(316) 0.0 80/80(100%) 0/80(0%) Minus/Minus
Query      128  PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKXXXXXXXXXXXLDPPVITAITGSG*KLSRPVLNTSTALALNGATIA  367
                PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA
Subject  11537  PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA  11776

Range 13: 11411 to 11488 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.8 bits(133) 0.0 26/26(100%) 0/26(0%) Minus/Minus
Query        2  GIRCCVIALLLDKSSFIEDTNIPNLA  79
                GIRCCVIALLLDKSSFIEDTNIPNLA
Subject  11411  GIRCCVIALLLDKSSFIEDTNIPNLA  11488

Nucleotide Sequence (310 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
31
62
93
124
155
186
217
248
279
310

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
200.8 1109.0 24% 4.456e-50 93% NC_004667.1
200.8 1109.0 24% 4.456e-50 93% AF037268.2
200.8 1109.0 24% 4.456e-50 93% GQ352632.1
200.8 1109.0 24% 4.456e-50 93% KX756668.1
199.0 1079.7 24% 1.587e-49 92% EU259806.1

Alignments

Grapevine leafroll associated virus 3, complete genome

Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 7

Range 1: 2817 to 3068 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
200.8 bits(432) 0.0 81/84(96%) 0/84(0%) Plus/Minus
Query       59  TGEKTCPRTVDVRNVPHYERIYRIFSNWQGFSIFCLHCLHDLN*IFHDSPREDAQATILQFPTEGLLRNIKGTSELQPV*SSRS  310
                T +KTCPRTVDVRNVPHYERIYRIFSNWQGFSIFCLHCLHDLN*IFHDSPREDAQATILQFPTEGLLRNIKGT ELQPV*SSRS
Subject   2817  TAKKTCPRTVDVRNVPHYERIYRIFSNWQGFSIFCLHCLHDLN*IFHDSPREDAQATILQFPTEGLLRNIKGTPELQPV*SSRS  3068

Range 2: 2819 to 3067 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.4 bits(418) 0.0 81/83(98%) 0/83(0%) Minus/Plus
Query       60  FWSFRQVGAQRCL*YFEGDLR*ETEE*SLARLL*GYRGRFN*GHEGNEDRRWKTPANY*RFCICVHNGERF*RPLYEGRSSRR  308
                FWSFRQVGAQ CL*YFEGDLR*ETEE*SLARLL*GYRGRFN*GHEGNEDRRWKTPANY*RFCICVHNGERF*RPLYEGRSS R
Subject   2819  FWSFRQVGAQGCL*YFEGDLR*ETEE*SLARLL*GYRGRFN*GHEGNEDRRWKTPANY*RFCICVHNGERF*RPLYEGRSSWR  3067

Range 3: 2817 to 3068 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
193.1 bits(415) 0.0 83/84(99%) 0/84(0%) Minus/Plus
Query       59  TSGASDRLELRGAFDISKETFGRKLKNSRLRVFSRAIVEDSIKVMKAMKTEDGKPLPITEDSVYAFIMGNVSNVHCTRAGLLAG  310
                TSGASDRLELRGAFDISKETFGRKLKNSRLRVFSRAIVEDSIKVMKAMKTEDGKPLPITEDSVYAFIMGNVSNVHCTRAGLL G
Subject   2817  TSGASDRLELRGAFDISKETFGRKLKNSRLRVFSRAIVEDSIKVMKAMKTEDGKPLPITEDSVYAFIMGNVSNVHCTRAGLLGG  3068

Range 4: 2819 to 3073 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
191.2 bits(411) 0.0 83/85(98%) 0/85(0%) Plus/Minus
Query       54  FGPARRPALVQWTLETFPIMNAYTESSVIGRGFPSSVFIAFMTLIESSTIALEKTRKRLFFSFLPKVSFEISKAPLSSNLSEAPE  308
                F P RRPALVQWTLETFPIMNAYTESSVIGRGFPSSVFIAFMTLIESSTIALEKTRKRLFFSFLPKVSFEISKAPLSSNLSEAPE
Subject   2819  FEPPRRPALVQWTLETFPIMNAYTESSVIGRGFPSSVFIAFMTLIESSTIALEKTRKRLFFSFLPKVSFEISKAPLSSNLSEAPE  3073

Range 5: 2818 to 3081 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
187.6 bits(403) 0.0 82/88(93%) 0/88(0%) Minus/Plus
Query       46  LLELQTGWSSEVPLIFRRRPSVGN*RIVACASSLGLSWKIQLRS*RQ*RQKMENPCQLLKILYMRS*WGTFLTSTVRGQVFSPVQTHP  309
                LLELQTGWSS VPLIFRRRPSVGN*RIVACASSLGLSWKIQLRS*RQ*RQKMENPCQLLKILYMRS*WGTFLTSTVRGQVF  V+  P
Subject   2818  LLELQTGWSSGVPLIFRRRPSVGN*RIVACASSLGLSWKIQLRS*RQ*RQKMENPCQLLKILYMRS*WGTFLTSTVRGQVFLAVRKRP  3081

Range 6: 2971 to 3069 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.5 bits(152) 0.0 31/33(94%) 0/33(0%) Plus/Minus
Query       58  DRREDLPSYSGR*KRSPL*THIQNLQ*LAGVFH  156
                +R+EDLPSYSGR*KRSPL*THIQNLQ*LAGVFH
Subject   2971  NRQEDLPSYSGR*KRSPL*THIQNLQ*LAGVFH  3069

Range 7: 2818 to 2907 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
69.3 bits(145) 0.0 29/30(97%) 0/30(0%) Plus/Minus
Query      220  ASDYSSVSYRRSPSKYQRHL*APTCLKLQK  309
                ASDYSSVSYRRSPSKYQRH *APTCLKLQK
Subject   2818  ASDYSSVSYRRSPSKYQRHP*APTCLKLQK  2907

Grapevine leafroll associated virus 3, complete genome

Sequence ID: AF037268.2 Length: 17919 Number of Matches: 7

Range 1: 2817 to 3068 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
200.8 bits(432) 0.0 81/84(96%) 0/84(0%) Plus/Minus
Query       59  TGEKTCPRTVDVRNVPHYERIYRIFSNWQGFSIFCLHCLHDLN*IFHDSPREDAQATILQFPTEGLLRNIKGTSELQPV*SSRS  310
                T +KTCPRTVDVRNVPHYERIYRIFSNWQGFSIFCLHCLHDLN*IFHDSPREDAQATILQFPTEGLLRNIKGT ELQPV*SSRS
Subject   2817  TAKKTCPRTVDVRNVPHYERIYRIFSNWQGFSIFCLHCLHDLN*IFHDSPREDAQATILQFPTEGLLRNIKGTPELQPV*SSRS  3068

Range 2: 2819 to 3067 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.4 bits(418) 0.0 81/83(98%) 0/83(0%) Minus/Plus
Query       60  FWSFRQVGAQRCL*YFEGDLR*ETEE*SLARLL*GYRGRFN*GHEGNEDRRWKTPANY*RFCICVHNGERF*RPLYEGRSSRR  308
                FWSFRQVGAQ CL*YFEGDLR*ETEE*SLARLL*GYRGRFN*GHEGNEDRRWKTPANY*RFCICVHNGERF*RPLYEGRSS R
Subject   2819  FWSFRQVGAQGCL*YFEGDLR*ETEE*SLARLL*GYRGRFN*GHEGNEDRRWKTPANY*RFCICVHNGERF*RPLYEGRSSWR  3067

Range 3: 2817 to 3068 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
193.1 bits(415) 0.0 83/84(99%) 0/84(0%) Minus/Plus
Query       59  TSGASDRLELRGAFDISKETFGRKLKNSRLRVFSRAIVEDSIKVMKAMKTEDGKPLPITEDSVYAFIMGNVSNVHCTRAGLLAG  310
                TSGASDRLELRGAFDISKETFGRKLKNSRLRVFSRAIVEDSIKVMKAMKTEDGKPLPITEDSVYAFIMGNVSNVHCTRAGLL G
Subject   2817  TSGASDRLELRGAFDISKETFGRKLKNSRLRVFSRAIVEDSIKVMKAMKTEDGKPLPITEDSVYAFIMGNVSNVHCTRAGLLGG  3068

Range 4: 2819 to 3073 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
191.2 bits(411) 0.0 83/85(98%) 0/85(0%) Plus/Minus
Query       54  FGPARRPALVQWTLETFPIMNAYTESSVIGRGFPSSVFIAFMTLIESSTIALEKTRKRLFFSFLPKVSFEISKAPLSSNLSEAPE  308
                F P RRPALVQWTLETFPIMNAYTESSVIGRGFPSSVFIAFMTLIESSTIALEKTRKRLFFSFLPKVSFEISKAPLSSNLSEAPE
Subject   2819  FEPPRRPALVQWTLETFPIMNAYTESSVIGRGFPSSVFIAFMTLIESSTIALEKTRKRLFFSFLPKVSFEISKAPLSSNLSEAPE  3073

Range 5: 2818 to 3081 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
187.6 bits(403) 0.0 82/88(93%) 0/88(0%) Minus/Plus
Query       46  LLELQTGWSSEVPLIFRRRPSVGN*RIVACASSLGLSWKIQLRS*RQ*RQKMENPCQLLKILYMRS*WGTFLTSTVRGQVFSPVQTHP  309
                LLELQTGWSS VPLIFRRRPSVGN*RIVACASSLGLSWKIQLRS*RQ*RQKMENPCQLLKILYMRS*WGTFLTSTVRGQVF  V+  P
Subject   2818  LLELQTGWSSGVPLIFRRRPSVGN*RIVACASSLGLSWKIQLRS*RQ*RQKMENPCQLLKILYMRS*WGTFLTSTVRGQVFLAVRKRP  3081

Range 6: 2971 to 3069 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.5 bits(152) 0.0 31/33(94%) 0/33(0%) Plus/Minus
Query       58  DRREDLPSYSGR*KRSPL*THIQNLQ*LAGVFH  156
                +R+EDLPSYSGR*KRSPL*THIQNLQ*LAGVFH
Subject   2971  NRQEDLPSYSGR*KRSPL*THIQNLQ*LAGVFH  3069

Range 7: 2818 to 2907 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
69.3 bits(145) 0.0 29/30(97%) 0/30(0%) Plus/Minus
Query      220  ASDYSSVSYRRSPSKYQRHL*APTCLKLQK  309
                ASDYSSVSYRRSPSKYQRH *APTCLKLQK
Subject   2818  ASDYSSVSYRRSPSKYQRHP*APTCLKLQK  2907

Grapevine leafroll associated virus 3 isolate 623, complete genome

Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 7

Range 1: 3396 to 3647 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
200.8 bits(432) 0.0 81/84(96%) 0/84(0%) Plus/Minus
Query       59  TGEKTCPRTVDVRNVPHYERIYRIFSNWQGFSIFCLHCLHDLN*IFHDSPREDAQATILQFPTEGLLRNIKGTSELQPV*SSRS  310
                T +KTCPRTVDVRNVPHYERIYRIFSNWQGFSIFCLHCLHDLN*IFHDSPREDAQATILQFPTEGLLRNIKGT ELQPV*SSRS
Subject   3396  TAKKTCPRTVDVRNVPHYERIYRIFSNWQGFSIFCLHCLHDLN*IFHDSPREDAQATILQFPTEGLLRNIKGTPELQPV*SSRS  3647

Range 2: 3398 to 3646 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.4 bits(418) 0.0 81/83(98%) 0/83(0%) Minus/Plus
Query       60  FWSFRQVGAQRCL*YFEGDLR*ETEE*SLARLL*GYRGRFN*GHEGNEDRRWKTPANY*RFCICVHNGERF*RPLYEGRSSRR  308
                FWSFRQVGAQ CL*YFEGDLR*ETEE*SLARLL*GYRGRFN*GHEGNEDRRWKTPANY*RFCICVHNGERF*RPLYEGRSS R
Subject   3398  FWSFRQVGAQGCL*YFEGDLR*ETEE*SLARLL*GYRGRFN*GHEGNEDRRWKTPANY*RFCICVHNGERF*RPLYEGRSSWR  3646

Range 3: 3396 to 3647 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
193.1 bits(415) 0.0 83/84(99%) 0/84(0%) Minus/Plus
Query       59  TSGASDRLELRGAFDISKETFGRKLKNSRLRVFSRAIVEDSIKVMKAMKTEDGKPLPITEDSVYAFIMGNVSNVHCTRAGLLAG  310
                TSGASDRLELRGAFDISKETFGRKLKNSRLRVFSRAIVEDSIKVMKAMKTEDGKPLPITEDSVYAFIMGNVSNVHCTRAGLL G
Subject   3396  TSGASDRLELRGAFDISKETFGRKLKNSRLRVFSRAIVEDSIKVMKAMKTEDGKPLPITEDSVYAFIMGNVSNVHCTRAGLLGG  3647

Range 4: 3398 to 3652 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
191.2 bits(411) 0.0 83/85(98%) 0/85(0%) Plus/Minus
Query       54  FGPARRPALVQWTLETFPIMNAYTESSVIGRGFPSSVFIAFMTLIESSTIALEKTRKRLFFSFLPKVSFEISKAPLSSNLSEAPE  308
                F P RRPALVQWTLETFPIMNAYTESSVIGRGFPSSVFIAFMTLIESSTIALEKTRKRLFFSFLPKVSFEISKAPLSSNLSEAPE
Subject   3398  FEPPRRPALVQWTLETFPIMNAYTESSVIGRGFPSSVFIAFMTLIESSTIALEKTRKRLFFSFLPKVSFEISKAPLSSNLSEAPE  3652

Range 5: 3397 to 3660 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
187.6 bits(403) 0.0 82/88(93%) 0/88(0%) Minus/Plus
Query       46  LLELQTGWSSEVPLIFRRRPSVGN*RIVACASSLGLSWKIQLRS*RQ*RQKMENPCQLLKILYMRS*WGTFLTSTVRGQVFSPVQTHP  309
                LLELQTGWSS VPLIFRRRPSVGN*RIVACASSLGLSWKIQLRS*RQ*RQKMENPCQLLKILYMRS*WGTFLTSTVRGQVF  V+  P
Subject   3397  LLELQTGWSSGVPLIFRRRPSVGN*RIVACASSLGLSWKIQLRS*RQ*RQKMENPCQLLKILYMRS*WGTFLTSTVRGQVFLAVRKRP  3660

Range 6: 3550 to 3648 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.5 bits(152) 0.0 31/33(94%) 0/33(0%) Plus/Minus
Query       58  DRREDLPSYSGR*KRSPL*THIQNLQ*LAGVFH  156
                +R+EDLPSYSGR*KRSPL*THIQNLQ*LAGVFH
Subject   3550  NRQEDLPSYSGR*KRSPL*THIQNLQ*LAGVFH  3648

Range 7: 3397 to 3486 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
69.3 bits(145) 0.0 29/30(97%) 0/30(0%) Plus/Minus
Query      220  ASDYSSVSYRRSPSKYQRHL*APTCLKLQK  309
                ASDYSSVSYRRSPSKYQRH *APTCLKLQK
Subject   3397  ASDYSSVSYRRSPSKYQRHP*APTCLKLQK  3486

Grapevine leafroll associated virus 3 isolate TC BR, complete genome

Sequence ID: KX756668.1 Length: 18498 Number of Matches: 7

Range 1: 3396 to 3647 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
200.8 bits(432) 0.0 81/84(96%) 0/84(0%) Plus/Minus
Query       59  TGEKTCPRTVDVRNVPHYERIYRIFSNWQGFSIFCLHCLHDLN*IFHDSPREDAQATILQFPTEGLLRNIKGTSELQPV*SSRS  310
                T +KTCPRTVDVRNVPHYERIYRIFSNWQGFSIFCLHCLHDLN*IFHDSPREDAQATILQFPTEGLLRNIKGT ELQPV*SSRS
Subject   3396  TAKKTCPRTVDVRNVPHYERIYRIFSNWQGFSIFCLHCLHDLN*IFHDSPREDAQATILQFPTEGLLRNIKGTPELQPV*SSRS  3647

Range 2: 3398 to 3646 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.4 bits(418) 0.0 81/83(98%) 0/83(0%) Minus/Plus
Query       60  FWSFRQVGAQRCL*YFEGDLR*ETEE*SLARLL*GYRGRFN*GHEGNEDRRWKTPANY*RFCICVHNGERF*RPLYEGRSSRR  308
                FWSFRQVGAQ CL*YFEGDLR*ETEE*SLARLL*GYRGRFN*GHEGNEDRRWKTPANY*RFCICVHNGERF*RPLYEGRSS R
Subject   3398  FWSFRQVGAQGCL*YFEGDLR*ETEE*SLARLL*GYRGRFN*GHEGNEDRRWKTPANY*RFCICVHNGERF*RPLYEGRSSWR  3646

Range 3: 3396 to 3647 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
193.1 bits(415) 0.0 83/84(99%) 0/84(0%) Minus/Plus
Query       59  TSGASDRLELRGAFDISKETFGRKLKNSRLRVFSRAIVEDSIKVMKAMKTEDGKPLPITEDSVYAFIMGNVSNVHCTRAGLLAG  310
                TSGASDRLELRGAFDISKETFGRKLKNSRLRVFSRAIVEDSIKVMKAMKTEDGKPLPITEDSVYAFIMGNVSNVHCTRAGLL G
Subject   3396  TSGASDRLELRGAFDISKETFGRKLKNSRLRVFSRAIVEDSIKVMKAMKTEDGKPLPITEDSVYAFIMGNVSNVHCTRAGLLGG  3647

Range 4: 3398 to 3652 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
191.2 bits(411) 0.0 83/85(98%) 0/85(0%) Plus/Minus
Query       54  FGPARRPALVQWTLETFPIMNAYTESSVIGRGFPSSVFIAFMTLIESSTIALEKTRKRLFFSFLPKVSFEISKAPLSSNLSEAPE  308
                F P RRPALVQWTLETFPIMNAYTESSVIGRGFPSSVFIAFMTLIESSTIALEKTRKRLFFSFLPKVSFEISKAPLSSNLSEAPE
Subject   3398  FEPPRRPALVQWTLETFPIMNAYTESSVIGRGFPSSVFIAFMTLIESSTIALEKTRKRLFFSFLPKVSFEISKAPLSSNLSEAPE  3652

Range 5: 3397 to 3660 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
187.6 bits(403) 0.0 82/88(93%) 0/88(0%) Minus/Plus
Query       46  LLELQTGWSSEVPLIFRRRPSVGN*RIVACASSLGLSWKIQLRS*RQ*RQKMENPCQLLKILYMRS*WGTFLTSTVRGQVFSPVQTHP  309
                LLELQTGWSS VPLIFRRRPSVGN*RIVACASSLGLSWKIQLRS*RQ*RQKMENPCQLLKILYMRS*WGTFLTSTVRGQVF  V+  P
Subject   3397  LLELQTGWSSGVPLIFRRRPSVGN*RIVACASSLGLSWKIQLRS*RQ*RQKMENPCQLLKILYMRS*WGTFLTSTVRGQVFLAVRKRP  3660

Range 6: 3550 to 3648 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.5 bits(152) 0.0 31/33(94%) 0/33(0%) Plus/Minus
Query       58  DRREDLPSYSGR*KRSPL*THIQNLQ*LAGVFH  156
                +R+EDLPSYSGR*KRSPL*THIQNLQ*LAGVFH
Subject   3550  NRQEDLPSYSGR*KRSPL*THIQNLQ*LAGVFH  3648

Range 7: 3397 to 3486 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
69.3 bits(145) 0.0 29/30(97%) 0/30(0%) Plus/Minus
Query      220  ASDYSSVSYRRSPSKYQRHL*APTCLKLQK  309
                ASDYSSVSYRRSPSKYQRH *APTCLKLQK
Subject   3397  ASDYSSVSYRRSPSKYQRHP*APTCLKLQK  3486

Grapevine leafroll associated virus 3 isolate GP18, complete genome

Sequence ID: EU259806.1 Length: 18498 Number of Matches: 7

Range 1: 3396 to 3647 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
199.0 bits(428) 0.0 80/84(95%) 0/84(0%) Plus/Minus
Query       59  TGEKTCPRTVDVRNVPHYERIYRIFSNWQGFSIFCLHCLHDLN*IFHDSPREDAQATILQFPTEGLLRNIKGTSELQPV*SSRS  310
                T +KTCPRTVDVRNVPHYERIYRIFSNWQGFSIFCLHCLHDLN*IFHD PREDAQATILQFPTEGLLRNIKGT ELQPV*SSRS
Subject   3396  TAKKTCPRTVDVRNVPHYERIYRIFSNWQGFSIFCLHCLHDLN*IFHDGPREDAQATILQFPTEGLLRNIKGTPELQPV*SSRS  3647

Range 2: 3396 to 3647 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
188.0 bits(404) 0.0 81/84(96%) 0/84(0%) Minus/Plus
Query       59  TSGASDRLELRGAFDISKETFGRKLKNSRLRVFSRAIVEDSIKVMKAMKTEDGKPLPITEDSVYAFIMGNVSNVHCTRAGLLAG  310
                TSGASD LELRGAFDISKETFGRKLKNSRLRVFSRAIVEDSIKVMK MKTEDGKPLPITEDSVYAFIMGNVSNVHCTRAGLL G
Subject   3396  TSGASDGLELRGAFDISKETFGRKLKNSRLRVFSRAIVEDSIKVMKTMKTEDGKPLPITEDSVYAFIMGNVSNVHCTRAGLLGG  3647

Range 3: 3398 to 3646 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
187.1 bits(402) 0.0 78/83(94%) 0/83(0%) Minus/Plus
Query       60  FWSFRQVGAQRCL*YFEGDLR*ETEE*SLARLL*GYRGRFN*GHEGNEDRRWKTPANY*RFCICVHNGERF*RPLYEGRSSRR  308
                FWSFR+VGAQ CL*YFEGDLR*ETEE*SLARLL*G+RGRFN*GHE NEDRRWKTPANY*RFCICVHNGERF*RPLYEGRSS R
Subject   3398  FWSFRRVGAQGCL*YFEGDLR*ETEE*SLARLL*GHRGRFN*GHEDNEDRRWKTPANY*RFCICVHNGERF*RPLYEGRSSWR  3646

Range 4: 3398 to 3652 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
184.8 bits(397) 0.0 80/85(94%) 0/85(0%) Plus/Minus
Query       54  FGPARRPALVQWTLETFPIMNAYTESSVIGRGFPSSVFIAFMTLIESSTIALEKTRKRLFFSFLPKVSFEISKAPLSSNLSEAPE  308
                F P RRPALVQWTLETFPIMNAYTESSVIGRGFPSSVFI FMTLIESST+ALEKTRKRLFFSFLPKVSFEISKAPLSSN SEAPE
Subject   3398  FEPPRRPALVQWTLETFPIMNAYTESSVIGRGFPSSVFIVFMTLIESSTMALEKTRKRLFFSFLPKVSFEISKAPLSSNPSEAPE  3652

Range 5: 3397 to 3660 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
184.4 bits(396) 0.0 81/88(92%) 0/88(0%) Minus/Plus
Query       46  LLELQTGWSSEVPLIFRRRPSVGN*RIVACASSLGLSWKIQLRS*RQ*RQKMENPCQLLKILYMRS*WGTFLTSTVRGQVFSPVQTHP  309
                LLELQTGWSS VPLIFRRRPSVGN*RIVACASSLG SWKIQLRS*RQ*RQKMENPCQLLKILYMRS*WGTFLTSTVRGQVF  V+  P
Subject   3397  LLELQTGWSSGVPLIFRRRPSVGN*RIVACASSLGPSWKIQLRS*RQ*RQKMENPCQLLKILYMRS*WGTFLTSTVRGQVFLAVRKRP  3660

Range 6: 3550 to 3648 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.5 bits(152) 0.0 31/33(94%) 0/33(0%) Plus/Minus
Query       58  DRREDLPSYSGR*KRSPL*THIQNLQ*LAGVFH  156
                +R+EDLPSYSGR*KRSPL*THIQNLQ*LAGVFH
Subject   3550  NRQEDLPSYSGR*KRSPL*THIQNLQ*LAGVFH  3648

Range 7: 3397 to 3486 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.8 bits(133) 0.0 28/30(93%) 0/30(0%) Plus/Minus
Query      220  ASDYSSVSYRRSPSKYQRHL*APTCLKLQK  309
                ASDYSSVSYRRSPSKYQRH *APT LKLQK
Subject   3397  ASDYSSVSYRRSPSKYQRHP*APTRLKLQK  3486

Nucleotide Sequence (182 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
19
38
57
76
95
114
133
152
171
182

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
143.6 805.5 33% 1.724e-33 93% JX559645.1
143.6 717.1 33% 1.724e-33 78% JQ423939.1
143.6 796.4 33% 1.724e-33 92% NC_004667.1
143.6 807.4 34% 1.724e-33 92% KJ174518.1
143.6 796.4 33% 1.724e-33 92% AF037268.2

Alignments

Grapevine leafroll associated virus 3 isolate 3138 07, complete genome

Sequence ID: JX559645.1 Length: 18498 Number of Matches: 6

Range 1: 6783 to 6962 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
143.6 bits(307) 0.0 59/60(98%) 0/60(0%) Plus/Plus
Query        3  QGLLQLGVFATGASEGLFFGDINQIPFINREKEFRMDCAVFVPKKESVVYTSKSYRCPLD  182
                QGLLQLGVFATGASEGLFFGDINQIPFINREK FRMDCAVFVPKKESVVYTSKSYRCPLD
Subject   6783  QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLD  6962

Range 2: 6782 to 6961 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
139.9 bits(299) 0.0 58/60(97%) 0/60(0%) Minus/Minus
Query        2  SNGHLYDLEVYTTLSFFGTKTAQSILNSFSLFMNGI*FMSPKKRPSDAPVAKTPNCSKP*  181
                SNGHLYDLEVYTTLSFFGTKTAQSILN+FSLFMNGI*FMSPKKRPSDAPVAKTP+CSKP*
Subject   6782  SNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*  6961

Range 3: 6782 to 6961 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
136.2 bits(291) 0.0 56/60(93%) 0/60(0%) Plus/Plus
Query        2  SRLTTIRRLRDWRV*RPLFWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVR  181
                SRLTT RRLR+ RV RPLFWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVR
Subject   6782  SRLTTTRRLRNRRVGRPLFWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVR  6961

Range 4: 6781 to 6960 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
133.0 bits(284) 0.0 56/60(93%) 0/60(0%) Minus/Minus
Query        1  LTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLQTRQSRRRLIVVSLD  180
                LTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGL TR+ RRRL+VVSLD
Subject   6781  LTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLD  6960

Range 5: 6783 to 6962 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.0 bits(273) 0.0 57/60(95%) 0/60(0%) Minus/Minus
Query        3  I*RTPV*FRSVYNAFLLWNKNSTIHPKLLLPVYEWYLIYVSKKEAFRRASREDA*L**AL  182
                I*RTPV*FRSVYNAFLLWNKNSTIHPK LLPVYEWYLIYVSKKEAFRRA  EDA*L**AL
Subject   6783  I*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**AL  6962

Range 6: 6781 to 6960 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
124.8 bits(266) 0.0 56/60(93%) 0/60(0%) Plus/Plus
Query        1  IKAYYN*ASSRLARLKASFLET*IRYHS*TGRRSLGWIVLFLFQRRKALYTLLNHTGVR*  180
                IKAYYN*ASS+ AR KASFLET*IRYHS*TGRR LGWIVLFLFQRRKALYTLLNHTGVR*
Subject   6781  IKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*  6960

Grapevine leafroll associated virus 3 isolate LN, complete genome

Sequence ID: JQ423939.1 Length: 18563 Number of Matches: 6

Range 1: 6848 to 7027 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
143.6 bits(307) 0.0 59/60(98%) 0/60(0%) Plus/Plus
Query        3  QGLLQLGVFATGASEGLFFGDINQIPFINREKEFRMDCAVFVPKKESVVYTSKSYRCPLD  182
                QGLLQLGVFATGASEGLFFGDINQIPFINREK FRMDCAVFVPKKESVVYTSKSYRCPLD
Subject   6848  QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLD  7027

Range 2: 6847 to 7026 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
135.8 bits(290) 0.0 56/60(93%) 0/60(0%) Minus/Minus
Query        2  SNGHLYDLEVYTTLSFFGTKTAQSILNSFSLFMNGI*FMSPKKRPSDAPVAKTPNCSKP*  181
                SNGHLYDLEVYTTLSFFGTKTAQSILN+FSLFMNGI*FMSPKK PSDAPVAKTP+C+KP*
Subject   6847  SNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKSPSDAPVAKTPSCNKP*  7026

Range 3: 6847 to 7026 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
114.2 bits(243) 0.0 47/60(78%) 0/60(0%) Plus/Plus
Query        2  SRLTTIRRLRDWRV*RPLFWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVR  181
                SR  T RRL +WRV*R LFWRHKSDTIHKQGEGV*DGL CFCSKEGK  +H *I+QVS+R
Subject   6847  SRFITTRRLCNWRV*RTLFWRHKSDTIHKQGEGV*DGLRCFCSKEGKCGVHL*IVQVSIR  7026

Range 4: 6846 to 7025 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.0 bits(238) 0.0 47/60(78%) 0/60(0%) Minus/Minus
Query        1  LTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLQTRQSRRRLIVVSLD  180
                L DTC I*+C   FPSLEQKQ NPS*TPSPCL*MVSDLCLQKR LQTRQ +RRL+V++LD
Subject   6846  LMDTCTI*RCTPHFPSLEQKQRNPS*TPSPCL*MVSDLCLQKRVLQTRQLQRRLVVINLD  7025

Range 5: 6848 to 7027 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
107.8 bits(229) 0.0 47/60(78%) 0/60(0%) Minus/Minus
Query        3  I*RTPV*FRSVYNAFLLWNKNSTIHPKLLLPVYEWYLIYVSKKEAFRRASREDA*L**AL  182
                +* TPV FR V++ FLLWNKNS IHPK LLPVYEWYLIYVSKKE+FRRAS +DA*L** L
Subject   6848  V*WTPVRFRGVHHTFLLWNKNSAIHPKHLLPVYEWYLIYVSKKESFRRASCKDA*L**TL  7027

Range 6: 6846 to 7025 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
103.7 bits(220) 0.0 48/60(80%) 0/60(0%) Plus/Plus
Query        1  IKAYYN*ASSRLARLKASFLET*IRYHS*TGRRSLGWIVLFLFQRRKALYTLLNHTGVR*  180
                IK YYN*AS +LARLK SFLET*IRYHS*TGRR LGWI LFLFQRRK   T LN TGV *
Subject   6846  IKVYYN*ASLQLARLKDSFLET*IRYHS*TGRRCLGWIALFLFQRRKVWCTPLNRTGVH*  7025

Grapevine leafroll associated virus 3, complete genome

Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 6

Range 1: 6204 to 6383 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
143.6 bits(307) 0.0 59/60(98%) 0/60(0%) Plus/Plus
Query        3  QGLLQLGVFATGASEGLFFGDINQIPFINREKEFRMDCAVFVPKKESVVYTSKSYRCPLD  182
                QGLLQLGVFATGASEGLFFGDINQIPFINREK FRMDCAVFVPKKESVVYTSKSYRCPLD
Subject   6204  QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLD  6383

Range 2: 6203 to 6382 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
139.9 bits(299) 0.0 58/60(97%) 0/60(0%) Minus/Minus
Query        2  SNGHLYDLEVYTTLSFFGTKTAQSILNSFSLFMNGI*FMSPKKRPSDAPVAKTPNCSKP*  181
                SNGHLYDLEVYTTLSFFGTKTAQSILN+FSLFMNGI*FMSPKKRPSDAPVAKTP+CSKP*
Subject   6203  SNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*  6382

Range 3: 6203 to 6382 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
135.8 bits(290) 0.0 55/60(92%) 0/60(0%) Plus/Plus
Query        2  SRLTTIRRLRDWRV*RPLFWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVR  181
                SRLTT RRLR+ RV RPLFWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*I+QVSVR
Subject   6203  SRLTTTRRLRNRRVGRPLFWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IVQVSVR  6382

Range 4: 6202 to 6381 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
130.3 bits(278) 0.0 55/60(92%) 0/60(0%) Minus/Minus
Query        1  LTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLQTRQSRRRLIVVSLD  180
                LTDTC I*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGL TR+ RRRL+VVSLD
Subject   6202  LTDTCTI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLD  6381

Range 5: 6204 to 6383 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
125.7 bits(268) 0.0 56/60(93%) 0/60(0%) Minus/Minus
Query        3  I*RTPV*FRSVYNAFLLWNKNSTIHPKLLLPVYEWYLIYVSKKEAFRRASREDA*L**AL  182
                I*RTPV FRSVYNAFLLWNKNSTIHPK LLPVYEWYLIYVSKKEAFRRA  EDA*L**AL
Subject   6204  I*RTPVRFRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**AL  6383

Range 6: 6202 to 6381 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
121.1 bits(258) 0.0 55/60(92%) 0/60(0%) Plus/Plus
Query        1  IKAYYN*ASSRLARLKASFLET*IRYHS*TGRRSLGWIVLFLFQRRKALYTLLNHTGVR*  180
                IKAYYN*ASS+ AR KASFLET*IRYHS*TGRR LGWIVLFLFQRRKALYTLLN TGVR*
Subject   6202  IKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNRTGVR*  6381

Grapevine leafroll associated virus 3, complete genome

Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 6

Range 1: 6783 to 6962 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
143.6 bits(307) 0.0 59/60(98%) 0/60(0%) Plus/Plus
Query        3  QGLLQLGVFATGASEGLFFGDINQIPFINREKEFRMDCAVFVPKKESVVYTSKSYRCPLD  182
                QGLLQLGVFATGASEGLFFGDINQIPFINREK FRMDCAVFVPKKESVVYTSKSYRCPLD
Subject   6783  QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLD  6962

Range 2: 6782 to 6961 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
141.7 bits(303) 0.0 57/60(95%) 0/60(0%) Plus/Plus
Query        2  SRLTTIRRLRDWRV*RPLFWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVR  181
                SRLTTIRRLRDWRV*RPLFWRHKSDTIHKQGEGV*DGLCC CSKEGK CIHF*IIQ+SVR
Subject   6782  SRLTTIRRLRDWRV*RPLFWRHKSDTIHKQGEGV*DGLCCICSKEGKCCIHF*IIQMSVR  6961

Range 3: 6782 to 6961 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
139.9 bits(299) 0.0 58/60(97%) 0/60(0%) Minus/Minus
Query        2  SNGHLYDLEVYTTLSFFGTKTAQSILNSFSLFMNGI*FMSPKKRPSDAPVAKTPNCSKP*  181
                SNGHLYDLEVYTTLSFFGT TAQSILN+FSLFMNGI*FMSPKKRPSDAPVAKTPNCSKP*
Subject   6782  SNGHLYDLEVYTTLSFFGTNTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPNCSKP*  6961

Range 4: 6781 to 6960 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
132.1 bits(282) 0.0 57/60(95%) 0/60(0%) Minus/Minus
Query        1  LTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLQTRQSRRRLIVVSLD  180
                LTD CMI*KCIQ FPSLEQ QHNPS*TPSPCL*MVSDLCLQKRGLQTRQSRRRLIVVSLD
Subject   6781  LTDICMI*KCIQHFPSLEQIQHNPS*TPSPCL*MVSDLCLQKRGLQTRQSRRRLIVVSLD  6960

Range 5: 6781 to 6960 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
126.2 bits(269) 0.0 56/60(93%) 0/60(0%) Plus/Plus
Query        1  IKAYYN*ASSRLARLKASFLET*IRYHS*TGRRSLGWIVLFLFQRRKALYTLLNHTGVR*  180
                IKAYYN*ASSRLARLKASFLET*IRYHS*TGRR LGWIVL+LFQRRK LYTLLNHT VR*
Subject   6781  IKAYYN*ASSRLARLKASFLET*IRYHS*TGRRCLGWIVLYLFQRRKVLYTLLNHTDVR*  6960

Range 6: 6783 to 6962 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.9 bits(264) 0.0 55/60(92%) 0/60(0%) Minus/Minus
Query        3  I*RTPV*FRSVYNAFLLWNKNSTIHPKLLLPVYEWYLIYVSKKEAFRRASREDA*L**AL  182
                +*RT V*FRSVYN FLLWNK STIHPK LLPVYEWYLIYVSKKEAFRRASREDA*L**AL
Subject   6783  V*RTSV*FRSVYNTFLLWNKYSTIHPKHLLPVYEWYLIYVSKKEAFRRASREDA*L**AL  6962

Grapevine leafroll associated virus 3, complete genome

Sequence ID: AF037268.2 Length: 17919 Number of Matches: 6

Range 1: 6204 to 6383 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
143.6 bits(307) 0.0 59/60(98%) 0/60(0%) Plus/Plus
Query        3  QGLLQLGVFATGASEGLFFGDINQIPFINREKEFRMDCAVFVPKKESVVYTSKSYRCPLD  182
                QGLLQLGVFATGASEGLFFGDINQIPFINREK FRMDCAVFVPKKESVVYTSKSYRCPLD
Subject   6204  QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLD  6383

Range 2: 6203 to 6382 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
139.9 bits(299) 0.0 58/60(97%) 0/60(0%) Minus/Minus
Query        2  SNGHLYDLEVYTTLSFFGTKTAQSILNSFSLFMNGI*FMSPKKRPSDAPVAKTPNCSKP*  181
                SNGHLYDLEVYTTLSFFGTKTAQSILN+FSLFMNGI*FMSPKKRPSDAPVAKTP+CSKP*
Subject   6203  SNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*  6382

Range 3: 6203 to 6382 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
135.8 bits(290) 0.0 55/60(92%) 0/60(0%) Plus/Plus
Query        2  SRLTTIRRLRDWRV*RPLFWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVR  181
                SRLTT RRLR+ RV RPLFWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*I+QVSVR
Subject   6203  SRLTTTRRLRNRRVGRPLFWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IVQVSVR  6382

Range 4: 6202 to 6381 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
130.3 bits(278) 0.0 55/60(92%) 0/60(0%) Minus/Minus
Query        1  LTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLQTRQSRRRLIVVSLD  180
                LTDTC I*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGL TR+ RRRL+VVSLD
Subject   6202  LTDTCTI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLD  6381

Range 5: 6204 to 6383 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
125.7 bits(268) 0.0 56/60(93%) 0/60(0%) Minus/Minus
Query        3  I*RTPV*FRSVYNAFLLWNKNSTIHPKLLLPVYEWYLIYVSKKEAFRRASREDA*L**AL  182
                I*RTPV FRSVYNAFLLWNKNSTIHPK LLPVYEWYLIYVSKKEAFRRA  EDA*L**AL
Subject   6204  I*RTPVRFRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**AL  6383

Range 6: 6202 to 6381 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
121.1 bits(258) 0.0 55/60(92%) 0/60(0%) Plus/Plus
Query        1  IKAYYN*ASSRLARLKASFLET*IRYHS*TGRRSLGWIVLFLFQRRKALYTLLNHTGVR*  180
                IKAYYN*ASS+ AR KASFLET*IRYHS*TGRR LGWIVLFLFQRRKALYTLLN TGVR*
Subject   6202  IKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNRTGVR*  6381

Nucleotide Sequence (345 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
35
70
105
140
175
210
245
280
315
345

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
217.8 1247.4 30% 4.275e-55 89% KM058745.1
69.8 866.0 27% 2.771e-22 65% KJ174518.1
69.8 866.0 27% 2.771e-22 65% GQ352632.1
69.8 866.0 27% 2.771e-22 65% EU259806.1
69.8 866.0 27% 2.771e-22 65% KX756668.1

Alignments

Grapevine leafroll associated virus 3 isolate GH24, complete genome

Sequence ID: KM058745.1 Length: 18493 Number of Matches: 7

Range 1: 18211 to 18492 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
217.8 bits(469) 0.0 93/94(99%) 0/94(0%) Plus/Minus
Query        4  T*LIVDKLAS*EARLGPNLPLDFGVYCTIYATTILLSTLRTNFTNIRVLNREVEFSHLTSNCDLNYKRVVIIFLLTKCFCFLFDVILITTPRFT  285
                T* IVDKLAS*EARLGPNLPLDFGVYCTIYATTILLSTLRTNFTNIRVLNREVEFSHLTSNCDLNYKRVVIIFLLTKCFCFLFDVILITTPRFT
Subject  18211  T*PIVDKLAS*EARLGPNLPLDFGVYCTIYATTILLSTLRTNFTNIRVLNREVEFSHLTSNCDLNYKRVVIIFLLTKCFCFLFDVILITTPRFT  18492

Range 2: 18175 to 18492 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
202.2 bits(435) 0.0 95/106(90%) 0/106(0%) Minus/Plus
Query        4  VSRQTNKYMRLFSEARRSN*DDIEKETKTFC**KNNDYSFVV*VAVRGKMTKLYLTV*HSDVCKISP*SR**YCSSVDSTINAKIQW*IGT*AGLL*G*LIDNKLG  321
                VS      ++L SEARRSN*DDIEKETKTFC**KNNDYSFVV*VAVRGKMTKLYLTV*HSDVCKISP*SR**YCSSVDSTINAKIQW*IGT*AGLL*G*LID++LG
Subject  18175  VSYYAYTLVKLCSEARRSN*DDIEKETKTFC**KNNDYSFVV*VAVRGKMTKLYLTV*HSDVCKISP*SR**YCSSVDSTINAKIQW*IGT*AGLL*G*LIDDRLG  18492

Range 3: 18209 to 18493 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
200.4 bits(431) 0.0 93/95(98%) 0/95(0%) Minus/Plus
Query        3  LVKRGVVIKMTSKRKQKHFVSRKIMTTLL*FRSQFEVR*LNSTSRFNTLMFVKLVRKVDSSIVVA*IVQ*TPKSNGKLGPRRASYEANLSTIS*V  287
                +VKRGVVIKMTSKRKQKHFVSRKIMTTLL*FRSQFEVR*LNSTSRFNTLMFVKLVRKVDSSIVVA*IVQ*TPKSNGKLGPRRASYEANLSTI *V
Subject  18209  VVKRGVVIKMTSKRKQKHFVSRKIMTTLL*FRSQFEVR*LNSTSRFNTLMFVKLVRKVDSSIVVA*IVQ*TPKSNGKLGPRRASYEANLSTIG*V  18493

Range 4: 18212 to 18493 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
199.5 bits(429) 0.0 93/94(99%) 0/94(0%) Plus/Minus
Query        3  DLTYCR*VSLIRGPPRSQFTIGFWXXXXXXXXXNTTIDFTD*FYKHQSVKP*GRV*SSYLELRPKLQKSSHYFSTNKMFLFPFRCHLNYYASLH  284
                DLTY R*VSLIRGPPRSQFTIGFWRLLYYLRYYNTTIDFTD*FYKHQSVKP*GRV*SSYLELRPKLQKSSHYFSTNKMFLFPFRCHLNYYASLH
Subject  18212  DLTYRR*VSLIRGPPRSQFTIGFWRLLYYLRYYNTTIDFTD*FYKHQSVKP*GRV*SSYLELRPKLQKSSHYFSTNKMFLFPFRCHLNYYASLH  18493

Range 5: 18168 to 18491 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
197.2 bits(424) 0.0 96/108(89%) 0/108(0%) Minus/Plus
Query        5  SVCVSTNQQVYAVV**SEA**LR*HRKGNKNILLVEK**LLFCSLGRSSR*DD*TLPHGLTL*CL*N*SVKSIVVL**RR*YNKRQNPMVNWDLGGPLMRLTYRQ*VR  328
                +VC+        V+**SEA**LR*HRKGNKNILLVEK**LLFCSLGRSSR*DD*TLPHGLTL*CL*N*SVKSIVVL**RR*YNKRQNPMVNWDLGGPLMRLTYR+*VR
Subject  18168  NVCLLLCLYSSKVM**SEA**LR*HRKGNKNILLVEK**LLFCSLGRSSR*DD*TLPHGLTL*CL*N*SVKSIVVL**RR*YNKRQNPMVNWDLGGPLMRLTYRR*VR  18491

Range 6: 18252 to 18491 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
176.1 bits(378) 0.0 79/80(99%) 0/80(0%) Plus/Minus
Query        5  PNLLSIS*PHKRPA*VPIYHWILAFIVLSTLLQYYYRLYGLILQTSEC*TVR*SLVILPRTAT*TTKE*SLFFY*QNVFV  244
                PNL SIS*PHKRPA*VPIYHWILAFIVLSTLLQYYYRLYGLILQTSEC*TVR*SLVILPRTAT*TTKE*SLFFY*QNVFV
Subject  18252  PNLSSIS*PHKRPA*VPIYHWILAFIVLSTLLQYYYRLYGLILQTSEC*TVR*SLVILPRTAT*TTKE*SLFFY*QNVFV  18491

Range 7: 7269 to 7334 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.2 bits(112) 0.0 22/22(100%) 0/22(0%) Plus/Plus
Query      280  FTKQPHILVGLSRHTRSLVYAA  345
                FTKQPHILVGLSRHTRSLVYAA
Subject   7269  FTKQPHILVGLSRHTRSLVYAA  7334

Grapevine leafroll associated virus 3, complete genome

Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 15

Range 1: 18260 to 18403 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
69.8 bits(146) 0.0 31/48(65%) 0/48(0%) Plus/Minus
Query      102  NTTIDFTD*FYKHQSVKP*GRV*SSYLELRPKLQKSSHYFSTNKMFLF  245
                N TIDFTD*FYK+QS+KP*GRV*SSYLE++P LQK      T+ +  F
Subject  18260  NITIDFTD*FYKYQSIKP*GRV*SSYLEIKPILQKRKTNKKTSLIISF  18403

Range 2: 18413 to 18496 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.3 bits(121) 0.0 24/28(86%) 0/28(0%) Plus/Minus
Query        5  PNLLSIS*PHKRPA*VPIYHWILAFIVL  88
                PNLLSIS*PHKRPA*VP + WILAFI+L
Subject  18413  PNLLSIS*PHKRPA*VPNFDWILAFIIL  18496

Range 3: 18295 to 18414 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
64.3 bits(134) 0.0 30/40(75%) 0/40(0%) Minus/Plus
Query       91  YSFVV*VAVRGKMTKLYLTV*HSDVCKISP*SR**YCSSV  210
                + FV *V  RGKMTKLYLTV*+SD+CKISP*SR**Y  S+
Subject  18295  FVFVE*VLFRGKMTKLYLTV*YSDICKISP*SR**YYISI  18414

Range 4: 18413 to 18496 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.6 bits(128) 0.0 25/28(89%) 0/28(0%) Minus/Plus
Query        5  *YNKRQNPMVNWDLGGPLMRLTYRQ*VR  88
                *YNKRQNP+  WDLGGPLMRLTYRQ*VR
Subject  18413  *YNKRQNPIKVWDLGGPLMRLTYRQ*VR  18496

Range 5: 18301 to 18414 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.5 bits(141) 0.0 30/38(79%) 0/38(0%) Plus/Minus
Query       91  YATTILLSTLRTNFTNIRVLNREVEFSHLTSNCDLNYK  204
                Y   I LSTLRTNFTNIRVLNREVEFSHLTS  +L YK
Subject  18301  YTNIISLSTLRTNFTNIRVLNREVEFSHLTSK*NLFYK  18414

Range 6: 18427 to 18498 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.1 bits(116) 0.0 22/24(92%) 0/24(0%) Plus/Minus
Query        3  DLTYCR*VSLIRGPPRSQFTIGFW  74
                DLTYCR*VSLIRGPPRSQ  IGFW
Subject  18427  DLTYCR*VSLIRGPPRSQTLIGFW  18498

Range 7: 18296 to 18415 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.4 bits(132) 0.0 30/40(75%) 0/40(0%) Minus/Plus
Query       90  TLL*FRSQFEVR*LNSTSRFNTLMFVKLVRKVDSSIVVA*  209
                + L* R  FEVR*LNSTSRFNTL+FVKLVRKVDS I++ *
Subject  18296  SFL*NRFYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*  18415

Range 8: 18412 to 18498 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.7 bits(113) 0.0 26/29(90%) 0/29(0%) Minus/Plus
Query        3  IVQ*TPKSNGKLGPRRASYEANLSTIS*V  89
                IV *TPKSN  LGPRRASYEANLSTIS*V
Subject  18412  IV**TPKSNQSLGPRRASYEANLSTIS*V  18498

Range 9: 18300 to 18425 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.3 bits(123) 0.0 28/42(67%) 0/42(0%) Plus/Minus
Query       80  IVLSTLLQYYYRLYGLILQTSEC*TVR*SLVILPRTAT*TTK  205
                +  + L+ Y+YRLYGLILQ SE *TVR*SLVILPR  T +TK
Subject  18300  VYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNKTYSTK  18425

Range 10: 18411 to 18497 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.7 bits(113) 0.0 26/29(90%) 0/29(0%) Plus/Minus
Query        4  T*LIVDKLAS*EARLGPNLPLDFGVYCTI  90
                T*LIVDKLAS*EARLGP L LDFGVY TI
Subject  18411  T*LIVDKLAS*EARLGPKL*LDFGVYYTI  18497

Range 11: 18255 to 18404 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.8 bits(122) 0.0 33/50(66%) 0/50(0%) Minus/Plus
Query      101  KGNKNILLVEK**LLFCSLGRSSR*DD*TLPHGLTL*CL*N*SVKSIVVL  250
                K N+ I LV      FC +G  SR*DD*TLPHGL L* L*N*SVKSIV+L
Subject  18255  KKNEIIRLVFLFVFRFCRIGFISR*DD*TLPHGLIL*YL*N*SVKSIVIL  18404

Range 12: 18414 to 18497 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.3 bits(97) 0.0 24/28(86%) 0/28(0%) Minus/Plus
Query        4  STINAKIQW*IGT*AGLL*G*LIDNKLG  87
                S INAKIQ   GT*AGLL*G*LIDNKLG
Subject  18414  SIINAKIQSKFGT*AGLL*G*LIDNKLG  18497

Range 13: 7269 to 7334 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.2 bits(112) 0.0 22/22(100%) 0/22(0%) Plus/Plus
Query      280  FTKQPHILVGLSRHTRSLVYAA  345
                FTKQPHILVGLSRHTRSLVYAA
Subject   7269  FTKQPHILVGLSRHTRSLVYAA  7334

Range 14: 7271 to 7333 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 19/21(90%) 0/21(0%) Minus/Minus
Query      282  AA*TSERVCLDKPTSICGCLV  344
                AA TSERVCLD+PTSICGCLV
Subject   7271  AAYTSERVCLDRPTSICGCLV  7333

Range 15: 7268 to 7333 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.3 bits(97) 0.0 16/22(73%) 0/22(0%) Plus/Plus
Query      279  LH*TTAYTCWFVETHTLTGLCR  344
                +H*TTAYTCW V+T+T TG+CR
Subject   7268  VH*TTAYTCWSVKTYTFTGVCR  7333

Grapevine leafroll associated virus 3 isolate 623, complete genome

Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 15

Range 1: 18260 to 18403 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
69.8 bits(146) 0.0 31/48(65%) 0/48(0%) Plus/Minus
Query      102  NTTIDFTD*FYKHQSVKP*GRV*SSYLELRPKLQKSSHYFSTNKMFLF  245
                N TIDFTD*FYK+QS+KP*GRV*SSYLE++P LQK      T+ +  F
Subject  18260  NITIDFTD*FYKYQSIKP*GRV*SSYLEIKPILQKRKTNKKTSLIISF  18403

Range 2: 18413 to 18496 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.3 bits(121) 0.0 24/28(86%) 0/28(0%) Plus/Minus
Query        5  PNLLSIS*PHKRPA*VPIYHWILAFIVL  88
                PNLLSIS*PHKRPA*VP + WILAFI+L
Subject  18413  PNLLSIS*PHKRPA*VPNFDWILAFIIL  18496

Range 3: 18295 to 18414 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
64.3 bits(134) 0.0 30/40(75%) 0/40(0%) Minus/Plus
Query       91  YSFVV*VAVRGKMTKLYLTV*HSDVCKISP*SR**YCSSV  210
                + FV *V  RGKMTKLYLTV*+SD+CKISP*SR**Y  S+
Subject  18295  FVFVE*VLFRGKMTKLYLTV*YSDICKISP*SR**YYISI  18414

Range 4: 18413 to 18496 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.6 bits(128) 0.0 25/28(89%) 0/28(0%) Minus/Plus
Query        5  *YNKRQNPMVNWDLGGPLMRLTYRQ*VR  88
                *YNKRQNP+  WDLGGPLMRLTYRQ*VR
Subject  18413  *YNKRQNPIKVWDLGGPLMRLTYRQ*VR  18496

Range 5: 18301 to 18414 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.5 bits(141) 0.0 30/38(79%) 0/38(0%) Plus/Minus
Query       91  YATTILLSTLRTNFTNIRVLNREVEFSHLTSNCDLNYK  204
                Y   I LSTLRTNFTNIRVLNREVEFSHLTS  +L YK
Subject  18301  YTNIISLSTLRTNFTNIRVLNREVEFSHLTSK*NLFYK  18414

Range 6: 18427 to 18498 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.1 bits(116) 0.0 22/24(92%) 0/24(0%) Plus/Minus
Query        3  DLTYCR*VSLIRGPPRSQFTIGFW  74
                DLTYCR*VSLIRGPPRSQ  IGFW
Subject  18427  DLTYCR*VSLIRGPPRSQTLIGFW  18498

Range 7: 18296 to 18415 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.4 bits(132) 0.0 30/40(75%) 0/40(0%) Minus/Plus
Query       90  TLL*FRSQFEVR*LNSTSRFNTLMFVKLVRKVDSSIVVA*  209
                + L* R  FEVR*LNSTSRFNTL+FVKLVRKVDS I++ *
Subject  18296  SFL*NRFYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*  18415

Range 8: 18412 to 18498 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.7 bits(113) 0.0 26/29(90%) 0/29(0%) Minus/Plus
Query        3  IVQ*TPKSNGKLGPRRASYEANLSTIS*V  89
                IV *TPKSN  LGPRRASYEANLSTIS*V
Subject  18412  IV**TPKSNQSLGPRRASYEANLSTIS*V  18498

Range 9: 18300 to 18425 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.3 bits(123) 0.0 28/42(67%) 0/42(0%) Plus/Minus
Query       80  IVLSTLLQYYYRLYGLILQTSEC*TVR*SLVILPRTAT*TTK  205
                +  + L+ Y+YRLYGLILQ SE *TVR*SLVILPR  T +TK
Subject  18300  VYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNKTYSTK  18425

Range 10: 18411 to 18497 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.7 bits(113) 0.0 26/29(90%) 0/29(0%) Plus/Minus
Query        4  T*LIVDKLAS*EARLGPNLPLDFGVYCTI  90
                T*LIVDKLAS*EARLGP L LDFGVY TI
Subject  18411  T*LIVDKLAS*EARLGPKL*LDFGVYYTI  18497

Range 11: 18255 to 18404 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.8 bits(122) 0.0 33/50(66%) 0/50(0%) Minus/Plus
Query      101  KGNKNILLVEK**LLFCSLGRSSR*DD*TLPHGLTL*CL*N*SVKSIVVL  250
                K N+ I LV      FC +G  SR*DD*TLPHGL L* L*N*SVKSIV+L
Subject  18255  KKNEIIRLVFLFVFRFCRIGFISR*DD*TLPHGLIL*YL*N*SVKSIVIL  18404

Range 12: 18414 to 18497 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.3 bits(97) 0.0 24/28(86%) 0/28(0%) Minus/Plus
Query        4  STINAKIQW*IGT*AGLL*G*LIDNKLG  87
                S INAKIQ   GT*AGLL*G*LIDNKLG
Subject  18414  SIINAKIQSKFGT*AGLL*G*LIDNKLG  18497

Range 13: 7269 to 7334 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.2 bits(112) 0.0 22/22(100%) 0/22(0%) Plus/Plus
Query      280  FTKQPHILVGLSRHTRSLVYAA  345
                FTKQPHILVGLSRHTRSLVYAA
Subject   7269  FTKQPHILVGLSRHTRSLVYAA  7334

Range 14: 7271 to 7333 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 19/21(90%) 0/21(0%) Minus/Minus
Query      282  AA*TSERVCLDKPTSICGCLV  344
                AA TSERVCLD+PTSICGCLV
Subject   7271  AAYTSERVCLDRPTSICGCLV  7333

Range 15: 7268 to 7333 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.3 bits(97) 0.0 16/22(73%) 0/22(0%) Plus/Plus
Query      279  LH*TTAYTCWFVETHTLTGLCR  344
                +H*TTAYTCW V+T+T TG+CR
Subject   7268  VH*TTAYTCWSVKTYTFTGVCR  7333

Grapevine leafroll associated virus 3 isolate GP18, complete genome

Sequence ID: EU259806.1 Length: 18498 Number of Matches: 15

Range 1: 18260 to 18403 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
69.8 bits(146) 0.0 31/48(65%) 0/48(0%) Plus/Minus
Query      102  NTTIDFTD*FYKHQSVKP*GRV*SSYLELRPKLQKSSHYFSTNKMFLF  245
                N TIDFTD*FYK+QS+KP*GRV*SSYLE++P LQK      T+ +  F
Subject  18260  NITIDFTD*FYKYQSIKP*GRV*SSYLEIKPILQKRKTNKKTSLIISF  18403

Range 2: 18413 to 18496 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.3 bits(121) 0.0 24/28(86%) 0/28(0%) Plus/Minus
Query        5  PNLLSIS*PHKRPA*VPIYHWILAFIVL  88
                PNLLSIS*PHKRPA*VP + WILAFI+L
Subject  18413  PNLLSIS*PHKRPA*VPNFDWILAFIIL  18496

Range 3: 18295 to 18414 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
64.3 bits(134) 0.0 30/40(75%) 0/40(0%) Minus/Plus
Query       91  YSFVV*VAVRGKMTKLYLTV*HSDVCKISP*SR**YCSSV  210
                + FV *V  RGKMTKLYLTV*+SD+CKISP*SR**Y  S+
Subject  18295  FVFVE*VLFRGKMTKLYLTV*YSDICKISP*SR**YYISI  18414

Range 4: 18413 to 18496 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.6 bits(128) 0.0 25/28(89%) 0/28(0%) Minus/Plus
Query        5  *YNKRQNPMVNWDLGGPLMRLTYRQ*VR  88
                *YNKRQNP+  WDLGGPLMRLTYRQ*VR
Subject  18413  *YNKRQNPIKVWDLGGPLMRLTYRQ*VR  18496

Range 5: 18301 to 18414 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.5 bits(141) 0.0 30/38(79%) 0/38(0%) Plus/Minus
Query       91  YATTILLSTLRTNFTNIRVLNREVEFSHLTSNCDLNYK  204
                Y   I LSTLRTNFTNIRVLNREVEFSHLTS  +L YK
Subject  18301  YTNIISLSTLRTNFTNIRVLNREVEFSHLTSK*NLFYK  18414

Range 6: 18427 to 18498 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.1 bits(116) 0.0 22/24(92%) 0/24(0%) Plus/Minus
Query        3  DLTYCR*VSLIRGPPRSQFTIGFW  74
                DLTYCR*VSLIRGPPRSQ  IGFW
Subject  18427  DLTYCR*VSLIRGPPRSQTLIGFW  18498

Range 7: 18296 to 18415 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.4 bits(132) 0.0 30/40(75%) 0/40(0%) Minus/Plus
Query       90  TLL*FRSQFEVR*LNSTSRFNTLMFVKLVRKVDSSIVVA*  209
                + L* R  FEVR*LNSTSRFNTL+FVKLVRKVDS I++ *
Subject  18296  SFL*NRFYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*  18415

Range 8: 18412 to 18498 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.7 bits(113) 0.0 26/29(90%) 0/29(0%) Minus/Plus
Query        3  IVQ*TPKSNGKLGPRRASYEANLSTIS*V  89
                IV *TPKSN  LGPRRASYEANLSTIS*V
Subject  18412  IV**TPKSNQSLGPRRASYEANLSTIS*V  18498

Range 9: 18300 to 18425 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.3 bits(123) 0.0 28/42(67%) 0/42(0%) Plus/Minus
Query       80  IVLSTLLQYYYRLYGLILQTSEC*TVR*SLVILPRTAT*TTK  205
                +  + L+ Y+YRLYGLILQ SE *TVR*SLVILPR  T +TK
Subject  18300  VYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNKTYSTK  18425

Range 10: 18411 to 18497 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.7 bits(113) 0.0 26/29(90%) 0/29(0%) Plus/Minus
Query        4  T*LIVDKLAS*EARLGPNLPLDFGVYCTI  90
                T*LIVDKLAS*EARLGP L LDFGVY TI
Subject  18411  T*LIVDKLAS*EARLGPKL*LDFGVYYTI  18497

Range 11: 18255 to 18404 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.8 bits(122) 0.0 33/50(66%) 0/50(0%) Minus/Plus
Query      101  KGNKNILLVEK**LLFCSLGRSSR*DD*TLPHGLTL*CL*N*SVKSIVVL  250
                K N+ I LV      FC +G  SR*DD*TLPHGL L* L*N*SVKSIV+L
Subject  18255  KKNEIIRLVFLFVFRFCRIGFISR*DD*TLPHGLIL*YL*N*SVKSIVIL  18404

Range 12: 18414 to 18497 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.3 bits(97) 0.0 24/28(86%) 0/28(0%) Minus/Plus
Query        4  STINAKIQW*IGT*AGLL*G*LIDNKLG  87
                S INAKIQ   GT*AGLL*G*LIDNKLG
Subject  18414  SIINAKIQSKFGT*AGLL*G*LIDNKLG  18497

Range 13: 7269 to 7334 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.2 bits(112) 0.0 22/22(100%) 0/22(0%) Plus/Plus
Query      280  FTKQPHILVGLSRHTRSLVYAA  345
                FTKQPHILVGLSRHTRSLVYAA
Subject   7269  FTKQPHILVGLSRHTRSLVYAA  7334

Range 14: 7271 to 7333 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 19/21(90%) 0/21(0%) Minus/Minus
Query      282  AA*TSERVCLDKPTSICGCLV  344
                AA TSERVCLD+PTSICGCLV
Subject   7271  AAYTSERVCLDRPTSICGCLV  7333

Range 15: 7268 to 7333 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.3 bits(97) 0.0 16/22(73%) 0/22(0%) Plus/Plus
Query      279  LH*TTAYTCWFVETHTLTGLCR  344
                +H*TTAYTCW V+T+T TG+CR
Subject   7268  VH*TTAYTCWSVKTYTFTGVCR  7333

Grapevine leafroll associated virus 3 isolate TC BR, complete genome

Sequence ID: KX756668.1 Length: 18498 Number of Matches: 15

Range 1: 18260 to 18403 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
69.8 bits(146) 0.0 31/48(65%) 0/48(0%) Plus/Minus
Query      102  NTTIDFTD*FYKHQSVKP*GRV*SSYLELRPKLQKSSHYFSTNKMFLF  245
                N TIDFTD*FYK+QS+KP*GRV*SSYLE++P LQK      T+ +  F
Subject  18260  NITIDFTD*FYKYQSIKP*GRV*SSYLEIKPILQKRKTNKKTSLIISF  18403

Range 2: 18413 to 18496 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.3 bits(121) 0.0 24/28(86%) 0/28(0%) Plus/Minus
Query        5  PNLLSIS*PHKRPA*VPIYHWILAFIVL  88
                PNLLSIS*PHKRPA*VP + WILAFI+L
Subject  18413  PNLLSIS*PHKRPA*VPNFDWILAFIIL  18496

Range 3: 18295 to 18414 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
64.3 bits(134) 0.0 30/40(75%) 0/40(0%) Minus/Plus
Query       91  YSFVV*VAVRGKMTKLYLTV*HSDVCKISP*SR**YCSSV  210
                + FV *V  RGKMTKLYLTV*+SD+CKISP*SR**Y  S+
Subject  18295  FVFVE*VLFRGKMTKLYLTV*YSDICKISP*SR**YYISI  18414

Range 4: 18413 to 18496 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.6 bits(128) 0.0 25/28(89%) 0/28(0%) Minus/Plus
Query        5  *YNKRQNPMVNWDLGGPLMRLTYRQ*VR  88
                *YNKRQNP+  WDLGGPLMRLTYRQ*VR
Subject  18413  *YNKRQNPIKVWDLGGPLMRLTYRQ*VR  18496

Range 5: 18301 to 18414 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.5 bits(141) 0.0 30/38(79%) 0/38(0%) Plus/Minus
Query       91  YATTILLSTLRTNFTNIRVLNREVEFSHLTSNCDLNYK  204
                Y   I LSTLRTNFTNIRVLNREVEFSHLTS  +L YK
Subject  18301  YTNIISLSTLRTNFTNIRVLNREVEFSHLTSK*NLFYK  18414

Range 6: 18427 to 18498 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.1 bits(116) 0.0 22/24(92%) 0/24(0%) Plus/Minus
Query        3  DLTYCR*VSLIRGPPRSQFTIGFW  74
                DLTYCR*VSLIRGPPRSQ  IGFW
Subject  18427  DLTYCR*VSLIRGPPRSQTLIGFW  18498

Range 7: 18296 to 18415 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.4 bits(132) 0.0 30/40(75%) 0/40(0%) Minus/Plus
Query       90  TLL*FRSQFEVR*LNSTSRFNTLMFVKLVRKVDSSIVVA*  209
                + L* R  FEVR*LNSTSRFNTL+FVKLVRKVDS I++ *
Subject  18296  SFL*NRFYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*  18415

Range 8: 18412 to 18498 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.7 bits(113) 0.0 26/29(90%) 0/29(0%) Minus/Plus
Query        3  IVQ*TPKSNGKLGPRRASYEANLSTIS*V  89
                IV *TPKSN  LGPRRASYEANLSTIS*V
Subject  18412  IV**TPKSNQSLGPRRASYEANLSTIS*V  18498

Range 9: 18300 to 18425 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.3 bits(123) 0.0 28/42(67%) 0/42(0%) Plus/Minus
Query       80  IVLSTLLQYYYRLYGLILQTSEC*TVR*SLVILPRTAT*TTK  205
                +  + L+ Y+YRLYGLILQ SE *TVR*SLVILPR  T +TK
Subject  18300  VYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNKTYSTK  18425

Range 10: 18411 to 18497 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.7 bits(113) 0.0 26/29(90%) 0/29(0%) Plus/Minus
Query        4  T*LIVDKLAS*EARLGPNLPLDFGVYCTI  90
                T*LIVDKLAS*EARLGP L LDFGVY TI
Subject  18411  T*LIVDKLAS*EARLGPKL*LDFGVYYTI  18497

Range 11: 18255 to 18404 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.8 bits(122) 0.0 33/50(66%) 0/50(0%) Minus/Plus
Query      101  KGNKNILLVEK**LLFCSLGRSSR*DD*TLPHGLTL*CL*N*SVKSIVVL  250
                K N+ I LV      FC +G  SR*DD*TLPHGL L* L*N*SVKSIV+L
Subject  18255  KKNEIIRLVFLFVFRFCRIGFISR*DD*TLPHGLIL*YL*N*SVKSIVIL  18404

Range 12: 18414 to 18497 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.3 bits(97) 0.0 24/28(86%) 0/28(0%) Minus/Plus
Query        4  STINAKIQW*IGT*AGLL*G*LIDNKLG  87
                S INAKIQ   GT*AGLL*G*LIDNKLG
Subject  18414  SIINAKIQSKFGT*AGLL*G*LIDNKLG  18497

Range 13: 7269 to 7334 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.2 bits(112) 0.0 22/22(100%) 0/22(0%) Plus/Plus
Query      280  FTKQPHILVGLSRHTRSLVYAA  345
                FTKQPHILVGLSRHTRSLVYAA
Subject   7269  FTKQPHILVGLSRHTRSLVYAA  7334

Range 14: 7271 to 7333 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 19/21(90%) 0/21(0%) Minus/Minus
Query      282  AA*TSERVCLDKPTSICGCLV  344
                AA TSERVCLD+PTSICGCLV
Subject   7271  AAYTSERVCLDRPTSICGCLV  7333

Range 15: 7268 to 7333 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.3 bits(97) 0.0 16/22(73%) 0/22(0%) Plus/Plus
Query      279  LH*TTAYTCWFVETHTLTGLCR  344
                +H*TTAYTCW V+T+T TG+CR
Subject   7268  VH*TTAYTCWSVKTYTFTGVCR  7333

Nucleotide Sequence (752 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
76
152
228
304
380
456
532
608
684
752

Descriptions

Alignments

Grapevine leafroll associated virus 3, complete genome

Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 11

Range 1: 17577 to 18326 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
573.4 bits(1245) 0.0 244/250(98%) 0/250(0%) Plus/Minus
Query        1  PRNITYSTKTKNEQKD*PNYFIFLTFLYFKFIEGFLPITGC*TFSFSTYAN*SIQIVTNKHSD*RYAYKYIPPVTNVTSHDAIVYRYSDGFF*VPHRLLQKQTISTANKHAQVSNVNCNPFKDLTTAEQHNISTALRNKASRSTS*RSHSLKYTHYH*LDNSFVVCLLPQLRSVRSELALYVCQSIDHLSIQDIFYFPSFHDTLRITPST**LPEHLLNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA  750
                PRN TYSTKTKNEQKD*PNYFIFLTFLYFKFIEGFLPITGC*TFSFSTYAN*SIQIVTNKHSD*RYAYKYIPPVTNVTSHDAIVYRYSDGFF*VPHRLLQK TISTANKHAQ+SNVNCNPF+DLTTA QHNISTALRNKASRSTS*RSHSLKYTHYH*LDNSFVVCLLPQLRSVRSELALYVCQSIDHLSIQDIFYFPSFHDTLRITPST**LPEHLLNV*ANL*LCPPNTPLG KRRRSLYCQ*ELFYA
Subject  17577  PRNKTYSTKTKNEQKD*PNYFIFLTFLYFKFIEGFLPITGC*TFSFSTYAN*SIQIVTNKHSD*RYAYKYIPPVTNVTSHDAIVYRYSDGFF*VPHRLLQKLTISTANKHAQISNVNCNPFEDLTTA*QHNISTALRNKASRSTS*RSHSLKYTHYH*LDNSFVVCLLPQLRSVRSELALYVCQSIDHLSIQDIFYFPSFHDTLRITPST**LPEHLLNV*ANL*LCPPNTPLGRKRRRSLYCQ*ELFYA  18326

Range 2: 17576 to 18076 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
380.9 bits(825) 0.0 163/167(98%) 0/167(0%) Minus/Plus
Query      251  LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKKYLGYLSDQCSGKRIMLTQTGLTAVEEADILRTNYLVSGNGYISNCGIARMLILTLCCGAL*KCCVVQPLSNL*TGYS*RYLLAHVC*RC*LSAFVEGDEALRKTHQSSGT  751
                LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKKYLGYLSDQC GKRIMLTQTGLTAVEEADILRTNYLVSGNGYISNCGIARMLILTLCCGAL*KCCVV+PLSNL TGYS*RYL AHVC*RC*LSAFVEGDEALRKTHQSSGT
Subject  17576  LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKKYLGYLSDQCFGKRIMLTQTGLTAVEEADILRTNYLVSGNGYISNCGIARMLILTLCCGAL*KCCVVKPLSNLQTGYS*RYLFAHVC*RC*LSAFVEGDEALRKTHQSSGT  18076

Range 3: 18110 to 18325 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
161.0 bits(345) 0.0 70/72(97%) 0/72(0%) Minus/Plus
Query        2  VGCIYRRNVNRYVY*LLFVCSNWHM*KKRRFNNQ*WVKILQ*I*NKEK*EK*NN*ASLFVRFSFL*NRLYFE  217
                VGCIYRRNVNRYVY*LLFVCSNWHM*K+RRFNNQ*WVKILQ*I*NKEK*EK*NN*ASLFVRFSFL*NR YFE
Subject  18110  VGCIYRRNVNRYVY*LLFVCSNWHM*KRRRFNNQ*WVKILQ*I*NKEK*EK*NN*ASLFVRFSFL*NRFYFE  18325

Range 4: 17576 to 18229 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
485.9 bits(1054) 0.0 212/218(97%) 0/218(0%) Plus/Minus
Query       98  KDFYPLLVVKPSLFLHMPIRAYK**LINIAINVTPINTSHPSQTSLRTTQ*CTATLMGFSKCLIAFYKSRQLAPLTNMRK*VTLTVTRLKI*QRLNNTTFLQRSATKRQDQHPSDPTV*NIPITTD*IIRS*YVCFLNCGQSGLS*HYTFARALIT*VSKIFFTSPLSTTHFE*LHRLDDFQNIF*MFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ  751
                KDFYPLLVVKPS FLHMPIRAYK**LINIAINVTPINTSHPSQTSLRTTQ*CTATLMGFSKCLIAFYKS QLAPLTNMRK*VTLTVTRLKI*QRL+NTTFLQRSATKRQDQHPSDPTV*NIPITTD*IIRS*YVCFLNCGQSGLS*HYTFA+ALIT*VSKIFFTSPLSTTHFE*LHRLDDFQNIF*MFKQTSSYAHQTPHLV+SEGGVYTVN+NCSMQ
Subject  17576  KDFYPLLVVKPSPFLHMPIRAYK**LINIAINVTPINTSHPSQTSLRTTQ*CTATLMGFSKCLIAFYKS*QLAPLTNMRK*VTLTVTRLKI*QRLDNTTFLQRSATKRQDQHPSDPTV*NIPITTD*IIRS*YVCFLNCGQSGLS*HYTFAKALIT*VSKIFFTSPLSTTHFE*LHRLDDFQNIF*MFKQTSSYAHQTPHLVVSEGGVYTVNKNCSMQ  18229

Range 5: 18274 to 18324 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.2 bits(77) 0.0 16/17(94%) 0/17(0%) Plus/Minus
Query        3  SKYNLFYKNEKRTKRLA  53
                SK NLFYKNEKRTKRLA
Subject  18274  SK*NLFYKNEKRTKRLA  18324

Range 6: 17577 to 18218 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
488.6 bits(1060) 0.0 209/214(98%) 0/214(0%) Minus/Plus
Query      109  CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIQKMFWKSSSRWSYSKCVVERGEVKNILDT*VINALANV*C*LRPD*PQLRKQTYYERII*SVVMGIFQTVGSLGC*S*RFVAERCRNVVLFSRCQIFKRVTVNVTYLRMFVSGANCLLL*KAMRHLEKPIRVAVHYCVVRSDVCDGWDVFIGVTLIAMFISYYLYALIGICRKREGLTTSNG  750
                CIEQF LTV*TPPSL TKWGVWWA*LEVCLNIQKMFWKSSSRWSYSKCVVERGEVKNILDT*VINALANV*C*LRPD*PQLRKQTYYERII*SVVMGIFQTVGSLGC*S*RFVAERCRNVVL SRCQIFKRVTVNVTYLRMFVSGANC LL*KAMRHLEKPIRVAVHYCVVRSDVCDGWDVFIGVTLIAMFISYYLYALIGICRK EGLTTSNG
Subject  17577  CIEQFLLTV*TPPSLTTKWGVWWA*LEVCLNIQKMFWKSSSRWSYSKCVVERGEVKNILDT*VINALANV*C*LRPD*PQLRKQTYYERII*SVVMGIFQTVGSLGC*S*RFVAERCRNVVLSSRCQIFKRVTVNVTYLRMFVSGANCQLL*KAMRHLEKPIRVAVHYCVVRSDVCDGWDVFIGVTLIAMFISYYLYALIGICRKGEGLTTSNG  18218

Range 7: 17842 to 18228 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
287.9 bits(622) 0.0 126/129(98%) 0/129(0%) Plus/Minus
Query       99  RIFTHYWLLNLLFFYICQLEHTNSN**T*RLTLRL*IHPTRHKRHFARRNSVPLL*WVFLSASSPSTKADN*HR*QTCASK*R*L*PV*RFDNG*TTQHFYSAPQQSVKINILAIPQFEIYPLPLTR*F  485
                RIFTHYWLLNLL FYICQLEHTNSN**T*RLTLRL*IHPTRHKRHFARRNSVPLL*WVFLSASSPSTKADN*HR*QTCA+K*R*L*PV*RFDNG TTQHFYSAPQQSVKINILAIPQFEIYPLPLTR*F
Subject  17842  RIFTHYWLLNLLLFYICQLEHTNSN**T*RLTLRL*IHPTRHKRHFARRNSVPLL*WVFLSASSPSTKADN*HR*QTCANK*R*L*PV*RFDNGLTTQHFYSAPQQSVKINILAIPQFEIYPLPLTR*F  18228

Range 8: 17575 to 17790 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
167.9 bits(360) 0.0 70/72(97%) 0/72(0%) Plus/Minus
Query      537  IIRLPEH*SLKYPRYFLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS  752
                IIRLP+H*SLKYPRYFLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILS+RIVLCS
Subject  17575  IIRLPKH*SLKYPRYFLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSIRIVLCS  17790

Range 9: 18278 to 18325 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.0 bits(70) 0.0 15/16(94%) 0/16(0%) Plus/Minus
Query        2  LEI*PILQKRKTNKKT  49
                LEI PILQKRKTNKKT
Subject  18278  LEIKPILQKRKTNKKT  18325

Range 10: 17575 to 17877 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
231.5 bits(499) 0.0 99/101(98%) 0/101(0%) Minus/Plus
Query      450  AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFRRCSGSHQVDGVIRSVSWKEGK*KISWILK*SMLWQTYNANSDRTDRS*GSRHTTNELSSQW*WVYFK  752
                AA*NNS+*QYRLRLRL PSGVFGGHS*RFA*TFRRCSGSHQVDGVIRSVSWKEGK*KISWILK*SMLWQTYNANSDRTDRS*GSRHTTNELSSQW*WVYFK
Subject  17575  AA*NNSY*QYRLRLRLRPSGVFGGHS*RFA*TFRRCSGSHQVDGVIRSVSWKEGK*KISWILK*SMLWQTYNANSDRTDRS*GSRHTTNELSSQW*WVYFK  17877

Range 11: 17917 to 18240 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
192.6 bits(414) 0.0 104/108(96%) 0/108(0%) Minus/Plus
Query       87  RSAVEMLCCSAVVKSLNGXXXXXXXXXXXXXXLIVCFCRRR*GT*KNPSE*RYTIASCEVTFVTGGMYL*A*R*SLCLLVTICML*LAYVEKEKV*QPVMGKNPSINL  410
                RSAVEMLCC AVVKS NGLQLTLL CACLLAVLIV FCRRR*GT*KNPSE*RYTIASCEVTFVTGGMYL*A*R*SLCLLVTICML*LAYVEKEKV*QPVMGKNPSINL
Subject  17917  RSAVEMLCCQAVVKSSNGLQLTLLICACLLAVLIVSFCRRR*GT*KNPSE*RYTIASCEVTFVTGGMYL*A*R*SLCLLVTICML*LAYVEKEKV*QPVMGKNPSINL  18240

Grapevine leafroll associated virus 3 isolate GP18, complete genome

Sequence ID: EU259806.1 Length: 18498 Number of Matches: 11

Range 1: 17577 to 18326 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
569.7 bits(1237) 0.0 243/250(97%) 0/250(0%) Plus/Minus
Query        1  PRNITYSTKTKNEQKD*PNYFIFLTFLYFKFIEGFLPITGC*TFSFSTYAN*SIQIVTNKHSD*RYAYKYIPPVTNVTSHDAIVYRYSDGFF*VPHRLLQKQTISTANKHAQVSNVNCNPFKDLTTAEQHNISTALRNKASRSTS*RSHSLKYTHYH*LDNSFVVCLLPQLRSVRSELALYVCQSIDHLSIQDIFYFPSFHDTLRITPST**LPEHLLNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA  750
                PRN TYSTKTKNEQKD*PNYFIFLTFLYFKFIEGFLPITGC*TFSFSTYAN*SIQIVTNKHSD*RYAYKYIPPVTNVTSHDAIVYRYSD FF*VPHRLLQK TISTANKHAQ+SNVNCNPF+DLTTA QHNISTALRNKASRSTS*RSHSLKYTHYH*LDNSFVVCLLPQLRSVRSELALYVCQSIDHLSIQDIFYFPSFHDTLRITPST**LPEHLLNV*ANL*LCPPNTPLG KRRRSLYCQ*ELFYA
Subject  17577  PRNKTYSTKTKNEQKD*PNYFIFLTFLYFKFIEGFLPITGC*TFSFSTYAN*SIQIVTNKHSD*RYAYKYIPPVTNVTSHDAIVYRYSDWFF*VPHRLLQKLTISTANKHAQISNVNCNPFEDLTTA*QHNISTALRNKASRSTS*RSHSLKYTHYH*LDNSFVVCLLPQLRSVRSELALYVCQSIDHLSIQDIFYFPSFHDTLRITPST**LPEHLLNV*ANL*LCPPNTPLGRKRRRSLYCQ*ELFYA  18326

Range 2: 17576 to 18076 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
378.2 bits(819) 0.0 162/167(97%) 0/167(0%) Minus/Plus
Query      251  LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKKYLGYLSDQCSGKRIMLTQTGLTAVEEADILRTNYLVSGNGYISNCGIARMLILTLCCGAL*KCCVVQPLSNL*TGYS*RYLLAHVC*RC*LSAFVEGDEALRKTHQSSGT  751
                LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKKYLGYLSDQCSGK IMLTQTGLTAVEEADILRTNYLVSGNGYISNCGIARMLILTLCCGAL*KCCVV+PLSNL TGYS*RYL AHVC*RC*LSAFVEGDEALRKT+QSSGT
Subject  17576  LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKKYLGYLSDQCSGKHIMLTQTGLTAVEEADILRTNYLVSGNGYISNCGIARMLILTLCCGAL*KCCVVKPLSNLQTGYS*RYLFAHVC*RC*LSAFVEGDEALRKTNQSSGT  18076

Range 3: 18110 to 18325 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
158.2 bits(339) 0.0 69/72(96%) 0/72(0%) Minus/Plus
Query        2  VGCIYRRNVNRYVY*LLFVCSNWHM*KKRRFNNQ*WVKILQ*I*NKEK*EK*NN*ASLFVRFSFL*NRLYFE  217
                VGCIYRRNVNRYVY*LLFVC NWHM*K+RRFNNQ*WVKILQ*I*NKEK*EK*NN*ASLFVRFSFL*NR YFE
Subject  18110  VGCIYRRNVNRYVY*LLFVCFNWHM*KRRRFNNQ*WVKILQ*I*NKEK*EK*NN*ASLFVRFSFL*NRFYFE  18325

Range 4: 17576 to 18229 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
481.3 bits(1044) 0.0 210/218(96%) 0/218(0%) Plus/Minus
Query       98  KDFYPLLVVKPSLFLHMPIRAYK**LINIAINVTPINTSHPSQTSLRTTQ*CTATLMGFSKCLIAFYKSRQLAPLTNMRK*VTLTVTRLKI*QRLNNTTFLQRSATKRQDQHPSDPTV*NIPITTD*IIRS*YVCFLNCGQSGLS*HYTFARALIT*VSKIFFTSPLSTTHFE*LHRLDDFQNIF*MFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ  751
                KDFYPLLVVKPS FLHMPI+AYK**LINIAINVTPINTSHPSQTSLRTTQ*CTATL+GFSKCLIAFYKS QLAPLTNMRK*VTLTVTRLKI*QRL+NTTFLQRSATKRQDQHPSDPTV*NIPITTD*IIRS*YVCFLNCGQSGLS*HY FARALIT*VSKIFFTSPLSTTHFE*LHRLDDFQNIF*MFKQTSSYAHQTPHLV+SEGGVYTVN+NCSMQ
Subject  17576  KDFYPLLVVKPSPFLHMPIKAYK**LINIAINVTPINTSHPSQTSLRTTQ*CTATLIGFSKCLIAFYKS*QLAPLTNMRK*VTLTVTRLKI*QRLDNTTFLQRSATKRQDQHPSDPTV*NIPITTD*IIRS*YVCFLNCGQSGLS*HYMFARALIT*VSKIFFTSPLSTTHFE*LHRLDDFQNIF*MFKQTSSYAHQTPHLVVSEGGVYTVNKNCSMQ  18229

Range 5: 18274 to 18324 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.2 bits(77) 0.0 16/17(94%) 0/17(0%) Plus/Minus
Query        3  SKYNLFYKNEKRTKRLA  53
                SK NLFYKNEKRTKRLA
Subject  18274  SK*NLFYKNEKRTKRLA  18324

Range 6: 17577 to 18218 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
488.1 bits(1059) 0.0 208/214(97%) 0/214(0%) Minus/Plus
Query      109  CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIQKMFWKSSSRWSYSKCVVERGEVKNILDT*VINALANV*C*LRPD*PQLRKQTYYERII*SVVMGIFQTVGSLGC*S*RFVAERCRNVVLFSRCQIFKRVTVNVTYLRMFVSGANCLLL*KAMRHLEKPIRVAVHYCVVRSDVCDGWDVFIGVTLIAMFISYYLYALIGICRKREGLTTSNG  750
                CIEQF LTV*TPPSL TKWGVWWA*LEVCLNIQKMFWKSSSRWSYSKCVVERGEVKNILDT*VINALAN+*C*LRPD*PQLRKQTYYERII*SVVMGIFQTVGSLGC*S*RFVAERCRNVVL SRCQIFKRVTVNVTYLRMFVSGANC LL*KAMRHLEKPIRVAVHYCVVRSDVCDGWDVFIGVTLIAMFISYYLYALIGICRK EGLTTSNG
Subject  17577  CIEQFLLTV*TPPSLTTKWGVWWA*LEVCLNIQKMFWKSSSRWSYSKCVVERGEVKNILDT*VINALANI*C*LRPD*PQLRKQTYYERII*SVVMGIFQTVGSLGC*S*RFVAERCRNVVLSSRCQIFKRVTVNVTYLRMFVSGANCQLL*KAMRHLEKPIRVAVHYCVVRSDVCDGWDVFIGVTLIAMFISYYLYALIGICRKGEGLTTSNG  18218

Range 7: 17842 to 18228 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
280.1 bits(605) 0.0 124/129(96%) 0/129(0%) Plus/Minus
Query       99  RIFTHYWLLNLLFFYICQLEHTNSN**T*RLTLRL*IHPTRHKRHFARRNSVPLL*WVFLSASSPSTKADN*HR*QTCASK*R*L*PV*RFDNG*TTQHFYSAPQQSVKINILAIPQFEIYPLPLTR*F  485
                RIFTHYWLLNLL FYICQL+HTNSN**T*RLTLRL*IHPTRHKRHFARRNSVPLL* VFLSASSPSTKADN*HR*QTCA+K*R*L*PV*RFDNG TTQHFYSAPQQSVKINILAIPQFEIYPLPLTR*F
Subject  17842  RIFTHYWLLNLLLFYICQLKHTNSN**T*RLTLRL*IHPTRHKRHFARRNSVPLL*LVFLSASSPSTKADN*HR*QTCANK*R*L*PV*RFDNGLTTQHFYSAPQQSVKINILAIPQFEIYPLPLTR*F  18228

Range 8: 17575 to 17790 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
166.0 bits(356) 0.0 70/72(97%) 0/72(0%) Plus/Minus
Query      537  IIRLPEH*SLKYPRYFLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS  752
                II LPEH*SLKYPRYFLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILS+RIVLCS
Subject  17575  IICLPEH*SLKYPRYFLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSIRIVLCS  17790

Range 9: 18278 to 18325 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.0 bits(70) 0.0 15/16(94%) 0/16(0%) Plus/Minus
Query        2  LEI*PILQKRKTNKKT  49
                LEI PILQKRKTNKKT
Subject  18278  LEIKPILQKRKTNKKT  18325

Range 10: 17575 to 17877 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
231.5 bits(499) 0.0 99/101(98%) 0/101(0%) Minus/Plus
Query      450  AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFRRCSGSHQVDGVIRSVSWKEGK*KISWILK*SMLWQTYNANSDRTDRS*GSRHTTNELSSQW*WVYFK  752
                AA*NNS+*QYRLRLRL PSGVFGGHS*RFA*TFRRCSGSHQVDGVIRSVSWKEGK*KISWILK*SMLWQTYNANSDRTDRS*GSRHTTNELSSQW*WVYFK
Subject  17575  AA*NNSY*QYRLRLRLRPSGVFGGHS*RFA*TFRRCSGSHQVDGVIRSVSWKEGK*KISWILK*SMLWQTYNANSDRTDRS*GSRHTTNELSSQW*WVYFK  17877

Range 11: 17917 to 18240 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
188.9 bits(406) 0.0 103/108(95%) 0/108(0%) Minus/Plus
Query       87  RSAVEMLCCSAVVKSLNGXXXXXXXXXXXXXXLIVCFCRRR*GT*KNPSE*RYTIASCEVTFVTGGMYL*A*R*SLCLLVTICML*LAYVEKEKV*QPVMGKNPSINL  410
                RSAVEMLCC AVVKS NGLQLTLL CACLLAVLIV FCRRR*GT*KN SE*RYTIASCEVTFVTGGMYL*A*R*SLCLLVTICML*LAYVEKEKV*QPVMGKNPSINL
Subject  17917  RSAVEMLCCQAVVKSSNGLQLTLLICACLLAVLIVSFCRRR*GT*KNQSE*RYTIASCEVTFVTGGMYL*A*R*SLCLLVTICML*LAYVEKEKV*QPVMGKNPSINL  18240

Grapevine leafroll associated virus 3 isolate TC BR, complete genome

Sequence ID: KX756668.1 Length: 18498 Number of Matches: 11

Range 1: 17577 to 18326 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
566.0 bits(1229) 0.0 242/250(97%) 0/250(0%) Plus/Minus
Query        1  PRNITYSTKTKNEQKD*PNYFIFLTFLYFKFIEGFLPITGC*TFSFSTYAN*SIQIVTNKHSD*RYAYKYIPPVTNVTSHDAIVYRYSDGFF*VPHRLLQKQTISTANKHAQVSNVNCNPFKDLTTAEQHNISTALRNKASRSTS*RSHSLKYTHYH*LDNSFVVCLLPQLRSVRSELALYVCQSIDHLSIQDIFYFPSFHDTLRITPST**LPEHLLNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA  750
                PRN TYSTKTKNEQKD*PNYFIFLTFLYFKFIEGFLPITGC*TFSFSTYAN*SIQIVT+KHSD*RYAYKYIPPVTNVTSHDAIVYRYSDGFF*VPHRLLQK TISTANKHAQ+SNVNCNPF+DLTTAEQHNISTALRNKASRSTS*RSHSLKYTHYH*LDNSFVVCLLPQLRSVRSELALYV  SIDHLSIQDIFYFPSFHDTLRITPST**LPEHLLNV*ANL*LCPPNTPLG KRRRSLYCQ*ELFYA
Subject  17577  PRNKTYSTKTKNEQKD*PNYFIFLTFLYFKFIEGFLPITGC*TFSFSTYAN*SIQIVTSKHSD*RYAYKYIPPVTNVTSHDAIVYRYSDGFF*VPHRLLQKLTISTANKHAQISNVNCNPFEDLTTAEQHNISTALRNKASRSTS*RSHSLKYTHYH*LDNSFVVCLLPQLRSVRSELALYVY*SIDHLSIQDIFYFPSFHDTLRITPST**LPEHLLNV*ANL*LCPPNTPLGRKRRRSLYCQ*ELFYA  18326

Range 2: 17576 to 18076 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
378.6 bits(820) 0.0 162/167(97%) 0/167(0%) Minus/Plus
Query      251  LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKKYLGYLSDQCSGKRIMLTQTGLTAVEEADILRTNYLVSGNGYISNCGIARMLILTLCCGAL*KCCVVQPLSNL*TGYS*RYLLAHVC*RC*LSAFVEGDEALRKTHQSSGT  751
                LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKKYLGYLSD+CS K IMLTQTGLTAVEEADILRTNYLVSGNGYISNCGIARMLILTLCCGAL*KCCVVQPLSNL TGYS*RYL AHVC*RC*LSAFVEGDEALRKTHQSSGT
Subject  17576  LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKKYLGYLSDRCSSKHIMLTQTGLTAVEEADILRTNYLVSGNGYISNCGIARMLILTLCCGAL*KCCVVQPLSNLQTGYS*RYLFAHVC*RC*LSAFVEGDEALRKTHQSSGT  18076

Range 3: 18110 to 18325 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
161.0 bits(345) 0.0 70/72(97%) 0/72(0%) Minus/Plus
Query        2  VGCIYRRNVNRYVY*LLFVCSNWHM*KKRRFNNQ*WVKILQ*I*NKEK*EK*NN*ASLFVRFSFL*NRLYFE  217
                VGCIYRRNVNRYVY*LLFVCSNWHM*K+RRFNNQ*WVKILQ*I*NKEK*EK*NN*ASLFVRFSFL*NR YFE
Subject  18110  VGCIYRRNVNRYVY*LLFVCSNWHM*KRRRFNNQ*WVKILQ*I*NKEK*EK*NN*ASLFVRFSFL*NRFYFE  18325

Range 4: 17576 to 18229 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
481.7 bits(1045) 0.0 210/218(96%) 0/218(0%) Plus/Minus
Query       98  KDFYPLLVVKPSLFLHMPIRAYK**LINIAINVTPINTSHPSQTSLRTTQ*CTATLMGFSKCLIAFYKSRQLAPLTNMRK*VTLTVTRLKI*QRLNNTTFLQRSATKRQDQHPSDPTV*NIPITTD*IIRS*YVCFLNCGQSGLS*HYTFARALIT*VSKIFFTSPLSTTHFE*LHRLDDFQNIF*MFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ  751
                KDFYPLLVVKPS FLHMPIRAYK**L+NIAINVTPINTSHPSQTSLRTTQ*CTATLMGFSKCLIAFYKS QLAPLTNMRK*VTLTVTRLKI*QRLNNTTFLQRSATKRQDQHPSDPTV*NIPITTD*IIRS*YVCFLNCGQSGLS*HY F RA IT*VSKIFFTSPLSTTHFE*LHRLDDFQNIF*MFKQTSSYAHQTPHLV+SEGGVYTVN+NCSMQ
Subject  17576  KDFYPLLVVKPSPFLHMPIRAYK**LVNIAINVTPINTSHPSQTSLRTTQ*CTATLMGFSKCLIAFYKS*QLAPLTNMRK*VTLTVTRLKI*QRLNNTTFLQRSATKRQDQHPSDPTV*NIPITTD*IIRS*YVCFLNCGQSGLS*HYMFTRASIT*VSKIFFTSPLSTTHFE*LHRLDDFQNIF*MFKQTSSYAHQTPHLVVSEGGVYTVNKNCSMQ  18229

Range 5: 18274 to 18324 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.2 bits(77) 0.0 16/17(94%) 0/17(0%) Plus/Minus
Query        3  SKYNLFYKNEKRTKRLA  53
                SK NLFYKNEKRTKRLA
Subject  18274  SK*NLFYKNEKRTKRLA  18324

Range 6: 17577 to 18218 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
485.4 bits(1053) 0.0 206/214(96%) 0/214(0%) Minus/Plus
Query      109  CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIQKMFWKSSSRWSYSKCVVERGEVKNILDT*VINALANV*C*LRPD*PQLRKQTYYERII*SVVMGIFQTVGSLGC*S*RFVAERCRNVVLFSRCQIFKRVTVNVTYLRMFVSGANCLLL*KAMRHLEKPIRVAVHYCVVRSDVCDGWDVFIGVTLIAMFISYYLYALIGICRKREGLTTSNG  750
                CIEQF LTV*TPPSL TKWGVWWA*LEVCLNIQKMFWKSSSRWSYSKCVVERGEVKNILDT*VI+AL N+*C*LRPD*PQLRKQTYYERII*SVVMGIFQTVGSLGC*S*RFVAERCRNVVLFSRCQIFKRVTVNVTYLRMFVSGANC LL*KAMRHLEKPIRVAVHYCVVRSDVCDGWDVFIGVTLIAMF SYYLYALIGICRK EGLTTSNG
Subject  17577  CIEQFLLTV*TPPSLTTKWGVWWA*LEVCLNIQKMFWKSSSRWSYSKCVVERGEVKNILDT*VIDALVNI*C*LRPD*PQLRKQTYYERII*SVVMGIFQTVGSLGC*S*RFVAERCRNVVLFSRCQIFKRVTVNVTYLRMFVSGANCQLL*KAMRHLEKPIRVAVHYCVVRSDVCDGWDVFIGVTLIAMFTSYYLYALIGICRKGEGLTTSNG  18218

Range 7: 17842 to 18228 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
290.2 bits(627) 0.0 127/129(98%) 0/129(0%) Plus/Minus
Query       99  RIFTHYWLLNLLFFYICQLEHTNSN**T*RLTLRL*IHPTRHKRHFARRNSVPLL*WVFLSASSPSTKADN*HR*QTCASK*R*L*PV*RFDNG*TTQHFYSAPQQSVKINILAIPQFEIYPLPLTR*F  485
                RIFTHYWLLNLL FYICQLEHTNSN**T*RLTLRL*IHPTRHKRHFARRNSVPLL*WVFLSASSPSTKADN*HR*QTCA+K*R*L*PV*RFDNG*TTQHFYSAPQQSVKINILAIPQFEIYPLPLTR*F
Subject  17842  RIFTHYWLLNLLLFYICQLEHTNSN**T*RLTLRL*IHPTRHKRHFARRNSVPLL*WVFLSASSPSTKADN*HR*QTCANK*R*L*PV*RFDNG*TTQHFYSAPQQSVKINILAIPQFEIYPLPLTR*F  18228

Range 8: 17575 to 17790 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
159.1 bits(341) 0.0 68/72(94%) 0/72(0%) Plus/Minus
Query      537  IIRLPEH*SLKYPRYFLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS  752
                II L EH SLKYPRYFLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILS+RIVLCS
Subject  17575  IICLLEHRSLKYPRYFLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSIRIVLCS  17790

Range 9: 18278 to 18325 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.0 bits(70) 0.0 15/16(94%) 0/16(0%) Plus/Minus
Query        2  LEI*PILQKRKTNKKT  49
                LEI PILQKRKTNKKT
Subject  18278  LEIKPILQKRKTNKKT  18325

Range 10: 17575 to 17877 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
220.5 bits(475) 0.0 97/101(96%) 0/101(0%) Minus/Plus
Query      450  AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFRRCSGSHQVDGVIRSVSWKEGK*KISWILK*SMLWQTYNANSDRTDRS*GSRHTTNELSSQW*WVYFK  752
                AA*NNS+*QYRLRLRL PSGVFGGHS*RFA*TFRRCSGSHQVDGVIRSVSWKEGK*KISWILK*SML  TYNANSDRTDRS*GSRHTTNELSSQW*WVYFK
Subject  17575  AA*NNSY*QYRLRLRLRPSGVFGGHS*RFA*TFRRCSGSHQVDGVIRSVSWKEGK*KISWILK*SML**TYNANSDRTDRS*GSRHTTNELSSQW*WVYFK  17877

Range 11: 17917 to 18240 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.4 bits(418) 0.0 105/108(97%) 0/108(0%) Minus/Plus
Query       87  RSAVEMLCCSAVVKSLNGXXXXXXXXXXXXXXLIVCFCRRR*GT*KNPSE*RYTIASCEVTFVTGGMYL*A*R*SLCLLVTICML*LAYVEKEKV*QPVMGKNPSINL  410
                RSAVEMLCCSAVVKS NGLQLTLL CACLLAVLIV FCRRR*GT*KNPSE*RYTIASCEVTFVTGGMYL*A*R*SLCLLVTICML*LAYVEKEKV*QPVMGKNPSINL
Subject  17917  RSAVEMLCCSAVVKSSNGLQLTLLICACLLAVLIVSFCRRR*GT*KNPSE*RYTIASCEVTFVTGGMYL*A*R*SLCLLVTICML*LAYVEKEKV*QPVMGKNPSINL  18240

Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome

Sequence ID: KX701860.1 Length: 18020 Number of Matches: 11

Range 1: 17095 to 17844 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
565.6 bits(1228) 0.0 240/250(96%) 0/250(0%) Plus/Minus
Query        1  PRNITYSTKTKNEQKD*PNYFIFLTFLYFKFIEGFLPITGC*TFSFSTYAN*SIQIVTNKHSD*RYAYKYIPPVTNVTSHDAIVYRYSDGFF*VPHRLLQKQTISTANKHAQVSNVNCNPFKDLTTAEQHNISTALRNKASRSTS*RSHSLKYTHYH*LDNSFVVCLLPQLRSVRSELALYVCQSIDHLSIQDIFYFPSFHDTLRITPST**LPEHLLNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA  750
                PRN TYSTKTKNEQKD*PNYFIFLTFLYFKFIEGFLPITGC*TFSFSTYAN*S+QIVTNKHSD*RYAYKYIPPVTNVTSHDAIVYRYSDGFF*VPH LLQK TISTANKHAQ+SNVNCNPF+DLTTAEQ NISTALRNKASRSTS*RSHSL YTHYH*LDNSFVVCLLPQLRSVR ELALYVCQSIDHLSIQDIFYFPSFHDTLRITPST**LPEHLLNV*ANL*LCPPNTPLG KRRRSLYCQ*ELFYA
Subject  17095  PRNKTYSTKTKNEQKD*PNYFIFLTFLYFKFIEGFLPITGC*TFSFSTYAN*SVQIVTNKHSD*RYAYKYIPPVTNVTSHDAIVYRYSDGFF*VPHHLLQKLTISTANKHAQISNVNCNPFEDLTTAEQRNISTALRNKASRSTS*RSHSLTYTHYH*LDNSFVVCLLPQLRSVRFELALYVCQSIDHLSIQDIFYFPSFHDTLRITPST**LPEHLLNV*ANL*LCPPNTPLGRKRRRSLYCQ*ELFYA  17844

Range 2: 17094 to 17594 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
380.9 bits(825) 0.0 163/167(98%) 0/167(0%) Minus/Plus
Query      251  LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKKYLGYLSDQCSGKRIMLTQTGLTAVEEADILRTNYLVSGNGYISNCGIARMLILTLCCGAL*KCCVVQPLSNL*TGYS*RYLLAHVC*RC*LSAFVEGDEALRKTHQSSGT  751
                LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKKYLGYLSDQCS KRIMLTQTGLTAVEEADILRTNYLVSGNGY+SNCGIARMLILTLCCGAL*KCCVVQPLSNL TGYS*RYL AHVC*RC*LSAFVEGDEALRKTHQSSGT
Subject  17094  LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKKYLGYLSDQCSDKRIMLTQTGLTAVEEADILRTNYLVSGNGYMSNCGIARMLILTLCCGAL*KCCVVQPLSNLQTGYS*RYLFAHVC*RC*LSAFVEGDEALRKTHQSSGT  17594

Range 3: 17628 to 17843 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
155.5 bits(333) 0.0 69/72(96%) 0/72(0%) Minus/Plus
Query        2  VGCIYRRNVNRYVY*LLFVCSNWHM*KKRRFNNQ*WVKILQ*I*NKEK*EK*NN*ASLFVRFSFL*NRLYFE  217
                VGCIYRRNVNRYVY*LLFV SNWHM*K+RRFNNQ*WVKILQ*I*NKEK*EK*NN*ASLFVRFSFL*NR YFE
Subject  17628  VGCIYRRNVNRYVY*LLFVRSNWHM*KRRRFNNQ*WVKILQ*I*NKEK*EK*NN*ASLFVRFSFL*NRFYFE  17843

Range 4: 17094 to 17747 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
481.3 bits(1044) 0.0 210/218(96%) 0/218(0%) Plus/Minus
Query       98  KDFYPLLVVKPSLFLHMPIRAYK**LINIAINVTPINTSHPSQTSLRTTQ*CTATLMGFSKCLIAFYKSRQLAPLTNMRK*VTLTVTRLKI*QRLNNTTFLQRSATKRQDQHPSDPTV*NIPITTD*IIRS*YVCFLNCGQSGLS*HYTFARALIT*VSKIFFTSPLSTTHFE*LHRLDDFQNIF*MFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ  751
                KDFYPLLVVKPS FLHMPIRAYK**LINIAINVTPINTSHPSQTSLRTTQ*CTATLMGFSKCLI FYKS QLAPLTNMRK*VTLTVTRLKI*QRLNN TFLQRSATKRQDQHPSDPTV*+IPITTD*IIRS*YVCFLNCGQSGLS*HYTF RALIT*VSKIFFTSPLSTTHFE*LHRLDDFQNIF*MFKQTSSYAHQTPHLV+SEGGVYTVN+NCSMQ
Subject  17094  KDFYPLLVVKPSPFLHMPIRAYK**LINIAINVTPINTSHPSQTSLRTTQ*CTATLMGFSKCLITFYKS*QLAPLTNMRK*VTLTVTRLKI*QRLNNATFLQRSATKRQDQHPSDPTV*HIPITTD*IIRS*YVCFLNCGQSGLS*HYTFVRALIT*VSKIFFTSPLSTTHFE*LHRLDDFQNIF*MFKQTSSYAHQTPHLVVSEGGVYTVNKNCSMQ  17747

Range 5: 17792 to 17842 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.2 bits(77) 0.0 16/17(94%) 0/17(0%) Plus/Minus
Query        3  SKYNLFYKNEKRTKRLA  53
                SK NLFYKNEKRTKRLA
Subject  17792  SK*NLFYKNEKRTKRLA  17842

Range 6: 17095 to 17736 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
481.7 bits(1045) 0.0 205/214(96%) 0/214(0%) Minus/Plus
Query      109  CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIQKMFWKSSSRWSYSKCVVERGEVKNILDT*VINALANV*C*LRPD*PQLRKQTYYERII*SVVMGIFQTVGSLGC*S*RFVAERCRNVVLFSRCQIFKRVTVNVTYLRMFVSGANCLLL*KAMRHLEKPIRVAVHYCVVRSDVCDGWDVFIGVTLIAMFISYYLYALIGICRKREGLTTSNG  750
                CIEQF LTV*TPPSL TKWGVWWA*LEVCLNIQKMFWKSSSRWSYSKCVVERGEVKNILDT*VINAL NV*C*L+PD*PQLRKQTYYERII*SVVMGI QTVGSLGC*S*RFVAERCRNV LFSRCQIFKRVTVNVTYLRMFVSGANC LL*K MRHLEKPIRVAVHYCVVRSDVCDGWDVFIGVTLIAMFISYYLYALIGICRK EGLTTSNG
Subject  17095  CIEQFLLTV*TPPSLTTKWGVWWA*LEVCLNIQKMFWKSSSRWSYSKCVVERGEVKNILDT*VINALTNV*C*LKPD*PQLRKQTYYERII*SVVMGICQTVGSLGC*S*RFVAERCRNVALFSRCQIFKRVTVNVTYLRMFVSGANCQLL*KVMRHLEKPIRVAVHYCVVRSDVCDGWDVFIGVTLIAMFISYYLYALIGICRKGEGLTTSNG  17736

Range 7: 17360 to 17746 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
285.2 bits(616) 0.0 125/129(97%) 0/129(0%) Plus/Minus
Query       99  RIFTHYWLLNLLFFYICQLEHTNSN**T*RLTLRL*IHPTRHKRHFARRNSVPLL*WVFLSASSPSTKADN*HR*QTCASK*R*L*PV*RFDNG*TTQHFYSAPQQSVKINILAIPQFEIYPLPLTR*F  485
                RIFTHYWLLNLL FYICQLE TNSN**T*RLTLRL*IHPTRHKRHFARRNSVPLL*WVFLSASSPSTKADN*HR*QTCA+K*R*L*PV*RFDNG*TTQHFYSAPQQSVKINILAIPQF+IYPLPLTR*F
Subject  17360  RIFTHYWLLNLLLFYICQLERTNSN**T*RLTLRL*IHPTRHKRHFARRNSVPLL*WVFLSASSPSTKADN*HR*QTCANK*R*L*PV*RFDNG*TTQHFYSAPQQSVKINILAIPQFDIYPLPLTR*F  17746

Range 8: 17093 to 17308 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
166.0 bits(356) 0.0 70/72(97%) 0/72(0%) Plus/Minus
Query      537  IIRLPEH*SLKYPRYFLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS  752
                IIRL EH*SLKYPRYFLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILS+RIVLCS
Subject  17093  IIRLSEH*SLKYPRYFLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSIRIVLCS  17308

Range 9: 17796 to 17843 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.0 bits(70) 0.0 15/16(94%) 0/16(0%) Plus/Minus
Query        2  LEI*PILQKRKTNKKT  49
                LEI PILQKRKTNKKT
Subject  17796  LEIKPILQKRKTNKKT  17843

Range 10: 17093 to 17395 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
219.2 bits(472) 0.0 96/101(95%) 0/101(0%) Minus/Plus
Query      450  AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFRRCSGSHQVDGVIRSVSWKEGK*KISWILK*SMLWQTYNANSDRTDRS*GSRHTTNELSSQW*WVYFK  752
                AA*NNS+*QYRLRLRL PSGVFGGHS*RFA*TFRRCSGSHQVDGVIRSVSWKEGK*KISWILK*SML QTYNANS+RTDRS*GSRHTTNELSSQW*WVY K
Subject  17093  AA*NNSY*QYRLRLRLRPSGVFGGHS*RFA*TFRRCSGSHQVDGVIRSVSWKEGK*KISWILK*SML*QTYNANSNRTDRS*GSRHTTNELSSQW*WVYVK  17395

Range 11: 17435 to 17758 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
182.1 bits(391) 0.0 102/108(94%) 0/108(0%) Minus/Plus
Query       87  RSAVEMLCCSAVVKSLNGXXXXXXXXXXXXXXLIVCFCRRR*GT*KNPSE*RYTIASCEVTFVTGGMYL*A*R*SLCLLVTICML*LAYVEKEKV*QPVMGKNPSINL  410
                RSAVEML CSAVVKS NGLQLTLL CACLLAVLIV FCRR *GT*KNPSE*RYTIASCEVTFVTGGMYL*A*R*SLCLLVTIC L*LAYVEKEKV*QPVMGKNPSINL
Subject  17435  RSAVEMLRCSAVVKSSNGLQLTLLICACLLAVLIVSFCRR**GT*KNPSE*RYTIASCEVTFVTGGMYL*A*R*SLCLLVTICTL*LAYVEKEKV*QPVMGKNPSINL  17758

Grapevine leafroll associated virus 3 isolate 3 5 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130284.1 Length: 4711 Number of Matches: 11

Range 1: 3846 to 4595 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
564.7 bits(1226) 0.0 240/250(96%) 0/250(0%) Plus/Minus
Query        1  PRNITYSTKTKNEQKD*PNYFIFLTFLYFKFIEGFLPITGC*TFSFSTYAN*SIQIVTNKHSD*RYAYKYIPPVTNVTSHDAIVYRYSDGFF*VPHRLLQKQTISTANKHAQVSNVNCNPFKDLTTAEQHNISTALRNKASRSTS*RSHSLKYTHYH*LDNSFVVCLLPQLRSVRSELALYVCQSIDHLSIQDIFYFPSFHDTLRITPST**LPEHLLNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA  750
                PRN TYSTKTKNEQKD*PNYFIFLTFLYFKFIEGFLPITGC*TFSFSTYAN*S+QIVTNKHSD*RYAYKYIPPVTNVTSHDAIVYRYS GFF*VPHRLLQK T STANK+AQ+SNVNCNP +DLTTAEQHNISTALRNKASRSTS*RSHSLKYTHYH*LDNSFVVCLLPQLRSVRSELALYVCQSIDHLSIQDIFYFPSFHDTLRITPST**LPEHLLNV*ANL*LCPPNTPLG KRRRSLYCQ*ELFYA
Subject   3846  PRNKTYSTKTKNEQKD*PNYFIFLTFLYFKFIEGFLPITGC*TFSFSTYAN*SVQIVTNKHSD*RYAYKYIPPVTNVTSHDAIVYRYSYGFF*VPHRLLQKLTTSTANKNAQISNVNCNPIEDLTTAEQHNISTALRNKASRSTS*RSHSLKYTHYH*LDNSFVVCLLPQLRSVRSELALYVCQSIDHLSIQDIFYFPSFHDTLRITPST**LPEHLLNV*ANL*LCPPNTPLGRKRRRSLYCQ*ELFYA  4595

Range 2: 3845 to 4345 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
375.4 bits(813) 0.0 160/167(96%) 0/167(0%) Minus/Plus
Query      251  LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKKYLGYLSDQCSGKRIMLTQTGLTAVEEADILRTNYLVSGNGYISNCGIARMLILTLCCGAL*KCCVVQPLSNL*TGYS*RYLLAHVC*RC*LSAFVEGDEALRKTHQSSGT  751
                LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKKYLGYLSDQCSGK IMLTQTGLTAVEEADILRTNYLVSGNGYISNCGIARMLILTLCCG L*KCCVVQPLSNL +GYS*RYL AH C*RC*LSAFVEGDEALRKTH+SSGT
Subject   3845  LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKKYLGYLSDQCSGKHIMLTQTGLTAVEEADILRTNYLVSGNGYISNCGIARMLILTLCCGVL*KCCVVQPLSNLQSGYS*RYLFAHFC*RC*LSAFVEGDEALRKTHKSSGT  4345

Range 3: 4379 to 4594 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
150.0 bits(321) 0.0 69/72(96%) 0/72(0%) Minus/Plus
Query        2  VGCIYRRNVNRYVY*LLFVCSNWHM*KKRRFNNQ*WVKILQ*I*NKEK*EK*NN*ASLFVRFSFL*NRLYFE  217
                VGCIYRRNVNRYVY*LLFV SNWHM*KKRRFNNQ* VKILQ*I*NKEK*EK*NN*ASLFVRFSFL*NR YFE
Subject   4379  VGCIYRRNVNRYVY*LLFVRSNWHM*KKRRFNNQ**VKILQ*I*NKEK*EK*NN*ASLFVRFSFL*NRFYFE  4594

Range 4: 3845 to 4498 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
480.4 bits(1042) 0.0 211/218(97%) 0/218(0%) Plus/Minus
Query       98  KDFYPLLVVKPSLFLHMPIRAYK**LINIAINVTPINTSHPSQTSLRTTQ*CTATLMGFSKCLIAFYKSRQLAPLTNMRK*VTLTVTRLKI*QRLNNTTFLQRSATKRQDQHPSDPTV*NIPITTD*IIRS*YVCFLNCGQSGLS*HYTFARALIT*VSKIFFTSPLSTTHFE*LHRLDDFQNIF*MFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ  751
                KDFY LLVVKPSLFLHMPIRAYK**LINIAINVTPINTSHPSQTSLRTTQ*CTATLMGFSKCLIAFYKS QLAPLT MRK*VTLTVTRLKI*QRLNNTTFLQ SATKRQDQHPSDPTV*NIPITTD*IIRS*YVCFLNCGQSGLS*HY FARALIT*VSKIFFTSPLSTTHFE*LHRLDDFQNIF*MFKQTSSYAHQTPHLV+SEGGVYTVN+NCSMQ
Subject   3845  KDFYLLLVVKPSLFLHMPIRAYK**LINIAINVTPINTSHPSQTSLRTTQ*CTATLMGFSKCLIAFYKS*QLAPLTKMRK*VTLTVTRLKI*QRLNNTTFLQHSATKRQDQHPSDPTV*NIPITTD*IIRS*YVCFLNCGQSGLS*HYMFARALIT*VSKIFFTSPLSTTHFE*LHRLDDFQNIF*MFKQTSSYAHQTPHLVVSEGGVYTVNKNCSMQ  4498

Range 5: 4543 to 4593 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.2 bits(77) 0.0 16/17(94%) 0/17(0%) Plus/Minus
Query        3  SKYNLFYKNEKRTKRLA  53
                SK NLFYKNEKRTKRLA
Subject   4543  SK*NLFYKNEKRTKRLA  4593

Range 6: 3846 to 4484 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
482.2 bits(1046) 0.0 205/213(96%) 0/213(0%) Minus/Plus
Query      112  CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIQKMFWKSSSRWSYSKCVVERGEVKNILDT*VINALANV*C*LRPD*PQLRKQTYYERII*SVVMGIFQTVGSLGC*S*RFVAERCRNVVLFSRCQIFKRVTVNVTYLRMFVSGANCLLL*KAMRHLEKPIRVAVHYCVVRSDVCDGWDVFIGVTLIAMFISYYLYALIGICRKREGLTTSN  750
                CIEQF LTV*TPPSL TKWGVWWA*LEVCLNIQKMFWKSSSRWSYSKCVVERGEVKNILDT*VINALAN+*C*LRPD*PQLRKQTYYERII*SVVMGIFQTVGSLGC*S*RFVAE CRNVVLFSRCQIF RVTVNVTYLR+FVSGA+C LL*KAMRHLEKPIRVAVHYCVVRSDVCDGWDVFIGVTLIAMFISYYLYALIGICRKREGLTTSN
Subject   3846  CIEQFLLTV*TPPSLTTKWGVWWA*LEVCLNIQKMFWKSSSRWSYSKCVVERGEVKNILDT*VINALANI*C*LRPD*PQLRKQTYYERII*SVVMGIFQTVGSLGC*S*RFVAECCRNVVLFSRCQIFNRVTVNVTYLRIFVSGASCQLL*KAMRHLEKPIRVAVHYCVVRSDVCDGWDVFIGVTLIAMFISYYLYALIGICRKREGLTTSN  4484

Range 7: 4111 to 4497 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
276.5 bits(597) 0.0 122/129(95%) 0/129(0%) Plus/Minus
Query       99  RIFTHYWLLNLLFFYICQLEHTNSN**T*RLTLRL*IHPTRHKRHFARRNSVPLL*WVFLSASSPSTKADN*HR*QTCASK*R*L*PV*RFDNG*TTQHFYSAPQQSVKINILAIPQFEIYPLPLTR*F  485
                RIFT+YWLLNLLFFYICQLE TNSN**T*RLTLRL*IHPTRHKRHFARRNSVPLL WVFLSASSPSTKADN*HR*Q CA+K*R*L*P *RFDNG*TTQHFYS PQQSVKINILAIPQFEIYPLPLTR*F
Subject   4111  RIFTYYWLLNLLFFYICQLERTNSN**T*RLTLRL*IHPTRHKRHFARRNSVPLLLWVFLSASSPSTKADN*HR*QKCANK*R*L*PD*RFDNG*TTQHFYSTPQQSVKINILAIPQFEIYPLPLTR*F  4497

Range 8: 3844 to 4059 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
166.0 bits(356) 0.0 70/72(97%) 0/72(0%) Plus/Minus
Query      537  IIRLPEH*SLKYPRYFLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS  752
                II LPEH*SLKYPRYFLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILS+RIVLCS
Subject   3844  IICLPEH*SLKYPRYFLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSIRIVLCS  4059

Range 9: 4547 to 4594 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.0 bits(70) 0.0 15/16(94%) 0/16(0%) Plus/Minus
Query        2  LEI*PILQKRKTNKKT  49
                LEI PILQKRKTNKKT
Subject   4547  LEIKPILQKRKTNKKT  4594

Range 10: 3844 to 4146 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
231.5 bits(499) 0.0 99/101(98%) 0/101(0%) Minus/Plus
Query      450  AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFRRCSGSHQVDGVIRSVSWKEGK*KISWILK*SMLWQTYNANSDRTDRS*GSRHTTNELSSQW*WVYFK  752
                AA*NNS+*QYRLRLRL PSGVFGGHS*RFA*TFRRCSGSHQVDGVIRSVSWKEGK*KISWILK*SMLWQTYNANSDRTDRS*GSRHTTNELSSQW*WVYFK
Subject   3844  AA*NNSY*QYRLRLRLRPSGVFGGHS*RFA*TFRRCSGSHQVDGVIRSVSWKEGK*KISWILK*SMLWQTYNANSDRTDRS*GSRHTTNELSSQW*WVYFK  4146

Range 11: 4186 to 4509 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
181.6 bits(390) 0.0 99/108(92%) 0/108(0%) Minus/Plus
Query       87  RSAVEMLCCSAVVKSLNGXXXXXXXXXXXXXXLIVCFCRRR*GT*KNPSE*RYTIASCEVTFVTGGMYL*A*R*SLCLLVTICML*LAYVEKEKV*QPVMGKNPSINL  410
                RSAVEMLCCSAVVKS  GLQLTLL CA LLAVL+V FCRRR*GT*KNP E*RYTIASCEVTFVTGGMYL*A*R*SLCLLVTIC L*LAYVEKEKV*QPV+GKNPSINL
Subject   4186  RSAVEMLCCSAVVKSSIGLQLTLLICAFLLAVLVVSFCRRR*GT*KNP*E*RYTIASCEVTFVTGGMYL*A*R*SLCLLVTICTL*LAYVEKEKV*QPVIGKNPSINL  4509

Nucleotide Sequence (1214 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
122
244
366
488
610
732
854
976
1098
1214

Descriptions

Alignments

Grapevine leafroll associated virus 3 isolate TC BR, complete genome

Sequence ID: KX756668.1 Length: 18498 Number of Matches: 8

Range 1: 5478 to 6689 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
953.7 bits(2075) 0.0 403/404(100%) 0/404(0%) Plus/Minus
Query        1  ETFQIRISLLHRHIYVLRTSHISRNGGRAIG*LDKFVH*HRRLTATWGSIIAFVFERLK*FTHHTTSSDFQCTHQINSIMENQYIITYEQIVAQSYYRVDIFALDKNTFLSYEYIR*VPHTQAVLC*MKNEI*A*LVNVEAR**FINLIRHFQNTFSSSDGNVPSHKQRPVCSLNTYSQILQVLHDGIFRGPGFYHFKRHWGVVGFESHHWIISPEPLTLLDVILFTPDRVRRPPLDFPTTSLRQSLAP*LLCDRSGSTLVLRLLVWNTW*PLIRHAAG*LQHPAYAEDTPSRPKRQTDAPFVNRAH*MQVRPLKTARHEKIVTRSHVYDHNLTTLPTLN*EVSLPHEIDCQDGVIRWIALLIIGVEWYASTHLVLLH*AMVKDARVLNCRQDIF*DTGPPP*N  1212
                ETFQIRISLLHRHIYVLRTSHISRNGGRAIG*LDKFVH*HRRLTATWGSIIAFVFERLK*FTHHTTSSDFQCTHQINSIMENQYIITYEQIVAQSYYRVDIFALDKNTFLSYEYIR*VPHTQAVLC*MKNEI*A*LVNVEAR**FINLIRHFQNTFSSSDGNVPSHKQRPVCSLNTYSQILQVLHDGIFRGPGFYHFKRHWGVVGFESHHWIISPEPLTLLDVILFTPDRVRRPPLDFPTTSLRQSLAP*LLCDRSGSTLVLRLLVWNTW*PLIRHAAG*LQHPAYAEDTPSRPKRQTDAPFVNRAH*MQVRPLKTARHEKIVTRSHVYDHNLTTLPTLN*EVSLPHEIDCQDGVIRWIALLIIGVEWYASTHLVLLH*AMVKDARVLNCRQDIF*DTGPP *N
Subject   5478  ETFQIRISLLHRHIYVLRTSHISRNGGRAIG*LDKFVH*HRRLTATWGSIIAFVFERLK*FTHHTTSSDFQCTHQINSIMENQYIITYEQIVAQSYYRVDIFALDKNTFLSYEYIR*VPHTQAVLC*MKNEI*A*LVNVEAR**FINLIRHFQNTFSSSDGNVPSHKQRPVCSLNTYSQILQVLHDGIFRGPGFYHFKRHWGVVGFESHHWIISPEPLTLLDVILFTPDRVRRPPLDFPTTSLRQSLAP*LLCDRSGSTLVLRLLVWNTW*PLIRHAAG*LQHPAYAEDTPSRPKRQTDAPFVNRAH*MQVRPLKTARHEKIVTRSHVYDHNLTTLPTLN*EVSLPHEIDCQDGVIRWIALLIIGVEWYASTHLVLLH*AMVKDARVLNCRQDIF*DTGPP**N  6689

Range 2: 5487 to 6689 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
918.9 bits(1999) 0.0 400/401(100%) 0/401(0%) Minus/Plus
Query        1  GWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDERSPSXXXXXXXXXXXXXXVAQKSRGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGSDLIFHSTQDGLRVRDLPYVFIAEKGIFIKGKDVDAVVALGDNLFVCDDILVFHDAINLMGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGL  1203
                GWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDERSPSVPNQQPQNQGTTGTVAQKSRGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAV TAEGVLKVPNQVYESLPGFHVYKSGSDLIFHSTQDGLRVRDLPYVFIAEKGIFIKGKDVDAVVALGDNLFVCDDILVFHDAINLMGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGL
Subject   5487  GWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDERSPSVPNQQPQNQGTTGTVAQKSRGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVATAEGVLKVPNQVYESLPGFHVYKSGSDLIFHSTQDGLRVRDLPYVFIAEKGIFIKGKDVDAVVALGDNLFVCDDILVFHDAINLMGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGL  6689

Range 3: 5477 to 6688 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
914.7 bits(1990) 0.0 401/404(99%) 0/404(0%) Plus/Minus
Query        2  RPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTSIVVLPPPGGAL*HLYSNDLNDSPTIPHRATFSAPIKLIASWKTNISSHTNRLSPKATTASTSLPLIKIPFSAMNTYGKSLTRKPSCVE*KMRSEPDL*TWKPGSDS*T*LGTFKTPSAVVTAMFLAISNALYVLSIPIARYFKYSTTASSEVPVFTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHQIEYVDXXXXXXXXXXDRALPLDFCATVPVVPWFCGCWFGTLGDLSSDTPPANCNILPTPKTRRVALNVKLMRPSSIELTECKCVL*KPQGMRK*SPEATFMTITLPPFLHLIEKLAFPTRLTVRMGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSKTRGHPHKT  1213
                RPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTSIVVLPPPGGAL*HLYSNDLNDSPTIPHRATFSAPIKLIASWKTNISSHTNRLSPKATTASTSLPLIKIPFSAMNTYGKSLTRKPSCVE*KMRSEPDL*TWKPGSDS*T*LGTFKTPSAV TAMFLAISNALYVLSIPIARYFKYSTTASSEVPVFTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHQIEYVDLPLTSLPLPSDRALPLDFCATVPVVPWFCGCWFGTLGDLSSDTPPANCNILPTPKTRRVALNVKLMRPSSIELTECKCVL*KPQGMRK*SPEATFMTITLPPFLHLIEKLAFPTRLTVRMGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSKTRGHP +T
Subject   5477  RPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTSIVVLPPPGGAL*HLYSNDLNDSPTIPHRATFSAPIKLIASWKTNISSHTNRLSPKATTASTSLPLIKIPFSAMNTYGKSLTRKPSCVE*KMRSEPDL*TWKPGSDS*T*LGTFKTPSAVATAMFLAISNALYVLSIPIARYFKYSTTASSEVPVFTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHQIEYVDLPLTSLPLPSDRALPLDFCATVPVVPWFCGCWFGTLGDLSSDTPPANCNILPTPKTRRVALNVKLMRPSSIELTECKCVL*KPQGMRK*SPEATFMTITLPPFLHLIEKLAFPTRLTVRMGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSKTRGHPDET  6688

Range 4: 5480 to 6652 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
856.5 bits(1863) 0.0 388/391(99%) 0/391(0%) Minus/Plus
Query       38  FMGVAPCLRRYLDGN*VPERL*PLLSAEVQDGWRRTIPRR**GVLSIG*PHPDSQSRGEG*LLN*V*EGW*GYGHKRGFG*LFSHALRFSKDALAFSELY*RRAHQFDV*GDSACLXXXXXXXXXXXXVG*EVTKCSKPAAAKPRYYRNGRTKVKGQGSV*GKW*GSQGEVDVLDLV*TRLRQEV*VAQG**SSDGSQTRLHPNDV*SGKNRDL*RCRRGVLEVSGYRY*ENIQGVAYG*EHCRHYC*RCFESA*SSL*ITTGLPRLQVRLRSHFSFNTRRLACEGLTVCIHS*ERYFYQGQRCRRGSSFGRQSVRM**YIGFP*CY*FDGCTESRSMWYGG*II*VVRIQML*CSPRWR*DDDASGRICQVTQ*HGHHYG*CGKF*GHKY  1210
                F+ VAPCLRRYLDGN*VPERL*PLLSAEVQDGWRRTIPRR**GVLSIG*PHPDSQSRGEG*LLN*V*EGW*GYGHKRGFG*LFSHALRFSKDALAFSELY*RRAHQFDV*GDSACLRRRQDVAVSRRRVG*EVTKCSKPAAAKPRYYRNGRTKVKGQGSV*GKW*GSQGEVDVLDLV*TRLRQEV*VAQG**SSDGSQTRLHPNDV*SGKNRDL*RCRRGVLEVSGYRY*ENIQGVAYG*EHCR YC*RCFESA*SSL*ITTGLPRLQVRLRSHFSFNTRRLACEGLTVCIHS*ERYFYQGQRCRRGSSFGRQSVRM**YIGFP*CY*FDGCTESRSMWYGG*II*VVRIQML*CSPRWR*DDDASGRICQVTQ*HGHHYG*CGKF*GHKY
Subject   5480  FIRVAPCLRRYLDGN*VPERL*PLLSAEVQDGWRRTIPRR**GVLSIG*PHPDSQSRGEG*LLN*V*EGW*GYGHKRGFG*LFSHALRFSKDALAFSELY*RRAHQFDV*GDSACLRRRQDVAVSRRRVG*EVTKCSKPAAAKPRYYRNGRTKVKGQGSV*GKW*GSQGEVDVLDLV*TRLRQEV*VAQG**SSDGSQTRLHPNDV*SGKNRDL*RCRRGVLEVSGYRY*ENIQGVAYG*EHCRRYC*RCFESA*SSL*ITTGLPRLQVRLRSHFSFNTRRLACEGLTVCIHS*ERYFYQGQRCRRGSSFGRQSVRM**YIGFP*CY*FDGCTESRSMWYGG*II*VVRIQML*CSPRWR*DDDASGRICQVTQ*HGHHYG*CGKF*GHKY  6652

Range 5: 5719 to 6651 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
712.2 bits(1548) 0.0 310/311(100%) 0/311(0%) Plus/Minus
Query       39  YLCPQNFPH*P*WWPCYWVT*QIRPLASSSYRHLGEHYSICIRTT*MIHPPYHIERLSVHPSN**HHGKPIYHHIRTDCRPKLLPRRHLCP**KYLSQL*IHTVSPSHASRLVLNEK*DLSLTCKRGSPVVIHKLD*ALSKHLQQ**RQCS*P*ATPCMFSQYL*PDTSSTPRRHLQRSRFLPLQTSLGCSRV*EPSLDYQP*ATHTS*RNLVHXXXXXXXXP*LPYHFPQTEPCPLTFVRPFR*YLGFAAAGLEHLVTSHPTRRRLTATSCLRRRHAESP*TSN*CALRQ*SSLNASASFENRKA*ENSH  971
                YLCPQNFPH*P*WWPCYWVT*QIRPLASSSYRHLGEHYSICIRTT*MIHPPYHIERLSVHPSN**HHGKPIYHHIRTDCRPKLLPRRHLCP**KYLSQL*IHTVSPSHASRLVLNEK*DLSLTCKRGSPVVIHKLD*ALSKHLQQ* RQCS*P*ATPCMFSQYL*PDTSSTPRRHLQRSRFLPLQTSLGCSRV*EPSLDYQP*ATHTS*RNLVHTRSSTSTSP*LPYHFPQTEPCPLTFVRPFR*YLGFAAAGLEHLVTSHPTRRRLTATSCLRRRHAESP*TSN*CALRQ*SSLNASASFENRKA*ENSH
Subject   5719  YLCPQNFPH*P*WWPCYWVT*QIRPLASSSYRHLGEHYSICIRTT*MIHPPYHIERLSVHPSN**HHGKPIYHHIRTDCRPKLLPRRHLCP**KYLSQL*IHTVSPSHASRLVLNEK*DLSLTCKRGSPVVIHKLD*ALSKHLQQ*RRQCS*P*ATPCMFSQYL*PDTSSTPRRHLQRSRFLPLQTSLGCSRV*EPSLDYQP*ATHTS*RNLVHTRSSTSTSP*LPYHFPQTEPCPLTFVRPFR*YLGFAAAGLEHLVTSHPTRRRLTATSCLRRRHAESP*TSN*CALRQ*SSLNASASFENRKA*ENSH  6651

Range 6: 5479 to 5682 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
159.1 bits(341) 0.0 66/68(97%) 0/68(0%) Plus/Minus
Query     1008  SYT*LRS*PSPRD*LSGWGYPMDSTPHHRRGMVRLHPSCTSALSNGQRRSGT*LPSRYLLRHGATPIK  1211
                SYT*LRS*PSPRD*LSGWGYPMDSTPHHRRGMVRLHPSCTSALSNGQRRSGT*LPSRYLLRHGAT +K
Subject   5479  SYT*LRS*PSPRD*LSGWGYPMDSTPHHRRGMVRLHPSCTSALSNGQRRSGT*LPSRYLLRHGATLMK  5682

Range 7: 5866 to 6639 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
568.3 bits(1234) 0.0 258/258(100%) 0/258(0%) Minus/Plus
Query       51  RMRGHQVFQTSSRKTKVLPERSHKSQGARLCLREXXXXXXXXXXXXXXVNKITSRSVSGSGLIIQ*WLSNPTTPQ*RLKW*KPGPLKMPSWST*SIWL*VLREHTGRCLWLGTLPSLLLKVF*KCLIKFMNHYRASTFTSQAQISFFIQHKTACV*GTYRMYS*LRKVFLSRAKMSTR**LWATICSYVMIYWFSMMLLI*WVH*KSLDVVWWVNHLSRSNTNAIMLPQVAVRRRC*WTNLSSHPIARPPLRLMWEVL  824
                RMRGHQVFQTSSRKTKVLPERSHKSQGARLCLREVVGKSRGGRRTRSGVNKITSRSVSGSGLIIQ*WLSNPTTPQ*RLKW*KPGPLKMPSWST*SIWL*VLREHTGRCLWLGTLPSLLLKVF*KCLIKFMNHYRASTFTSQAQISFFIQHKTACV*GTYRMYS*LRKVFLSRAKMSTR**LWATICSYVMIYWFSMMLLI*WVH*KSLDVVWWVNHLSRSNTNAIMLPQVAVRRRC*WTNLSSHPIARPPLRLMWEVL
Subject   5866  RMRGHQVFQTSSRKTKVLPERSHKSQGARLCLREVVGKSRGGRRTRSGVNKITSRSVSGSGLIIQ*WLSNPTTPQ*RLKW*KPGPLKMPSWST*SIWL*VLREHTGRCLWLGTLPSLLLKVF*KCLIKFMNHYRASTFTSQAQISFFIQHKTACV*GTYRMYS*LRKVFLSRAKMSTR**LWATICSYVMIYWFSMMLLI*WVH*KSLDVVWWVNHLSRSNTNAIMLPQVAVRRRC*WTNLSSHPIARPPLRLMWEVL  6639

Range 8: 5479 to 5823 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
254.5 bits(549) 0.0 113/115(98%) 0/115(0%) Minus/Plus
Query      867  FYGGGPVS*KIS*RQLSTRASLTIA*CRSTRWVEAYHSTPMMRSAIHRITPS*QSISWGRLTSQLSVGRVVRLWS*TWLRVTIFSCLAVFKGRTCIQ*ALLTKGASV*RLGRLGV  1211
                F+ GGPVS*KIS*RQLSTRASLTIA*CRSTRWVEAYHSTPMMRSAIHRITPS*QSISWGRLTSQLSVGRVVRLWS*TWLRVTIFSCLAVFKGRTCIQ*ALLTKGASV*RLGRLGV
Subject   5479  FHQGGPVS*KIS*RQLSTRASLTIA*CRSTRWVEAYHSTPMMRSAIHRITPS*QSISWGRLTSQLSVGRVVRLWS*TWLRVTIFSCLAVFKGRTCIQ*ALLTKGASV*RLGRLGV  5823

Grapevine leafroll associated virus 3, complete genome

Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 8

Range 1: 5478 to 6689 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
949.6 bits(2066) 0.0 402/404(100%) 0/404(0%) Plus/Minus
Query        1  ETFQIRISLLHRHIYVLRTSHISRNGGRAIG*LDKFVH*HRRLTATWGSIIAFVFERLK*FTHHTTSSDFQCTHQINSIMENQYIITYEQIVAQSYYRVDIFALDKNTFLSYEYIR*VPHTQAVLC*MKNEI*A*LVNVEAR**FINLIRHFQNTFSSSDGNVPSHKQRPVCSLNTYSQILQVLHDGIFRGPGFYHFKRHWGVVGFESHHWIISPEPLTLLDVILFTPDRVRRPPLDFPTTSLRQSLAP*LLCDRSGSTLVLRLLVWNTW*PLIRHAAG*LQHPAYAEDTPSRPKRQTDAPFVNRAH*MQVRPLKTARHEKIVTRSHVYDHNLTTLPTLN*EVSLPHEIDCQDGVIRWIALLIIGVEWYASTHLVLLH*AMVKDARVLNCRQDIF*DTGPPP*N  1212
                ETFQIRISLLHRHIYVLRTSHISRNGGRAIG*LDKFVH*HRRLTATWGSIIAFVFERLK*FTHHTTSSDFQCTHQINSIMEN YIITYEQIVAQSYYRVDIFALDKNTFLSYEYIR*VPHTQAVLC*MKNEI*A*LVNVEAR**FINLIRHFQNTFSSSDGNVPSHKQRPVCSLNTYSQILQVLHDGIFRGPGFYHFKRHWGVVGFESHHWIISPEPLTLLDVILFTPDRVRRPPLDFPTTSLRQSLAP*LLCDRSGSTLVLRLLVWNTW*PLIRHAAG*LQHPAYAEDTPSRPKRQTDAPFVNRAH*MQVRPLKTARHEKIVTRSHVYDHNLTTLPTLN*EVSLPHEIDCQDGVIRWIALLIIGVEWYASTHLVLLH*AMVKDARVLNCRQDIF*DTGPP *N
Subject   5478  ETFQIRISLLHRHIYVLRTSHISRNGGRAIG*LDKFVH*HRRLTATWGSIIAFVFERLK*FTHHTTSSDFQCTHQINSIMEN*YIITYEQIVAQSYYRVDIFALDKNTFLSYEYIR*VPHTQAVLC*MKNEI*A*LVNVEAR**FINLIRHFQNTFSSSDGNVPSHKQRPVCSLNTYSQILQVLHDGIFRGPGFYHFKRHWGVVGFESHHWIISPEPLTLLDVILFTPDRVRRPPLDFPTTSLRQSLAP*LLCDRSGSTLVLRLLVWNTW*PLIRHAAG*LQHPAYAEDTPSRPKRQTDAPFVNRAH*MQVRPLKTARHEKIVTRSHVYDHNLTTLPTLN*EVSLPHEIDCQDGVIRWIALLIIGVEWYASTHLVLLH*AMVKDARVLNCRQDIF*DTGPP**N  6689

Range 2: 5487 to 6689 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
918.9 bits(1999) 0.0 400/401(100%) 0/401(0%) Minus/Plus
Query        1  GWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDERSPSXXXXXXXXXXXXXXVAQKSRGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGSDLIFHSTQDGLRVRDLPYVFIAEKGIFIKGKDVDAVVALGDNLFVCDDILVFHDAINLMGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGL  1203
                GWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDERSPSVPNQQPQNQGTTGTVAQKSRGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAV TAEGVLKVPNQVYESLPGFHVYKSGSDLIFHSTQDGLRVRDLPYVFIAEKGIFIKGKDVDAVVALGDNLFVCDDILVFHDAINLMGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGL
Subject   5487  GWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDERSPSVPNQQPQNQGTTGTVAQKSRGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVATAEGVLKVPNQVYESLPGFHVYKSGSDLIFHSTQDGLRVRDLPYVFIAEKGIFIKGKDVDAVVALGDNLFVCDDILVFHDAINLMGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGL  6689

Range 3: 5477 to 6688 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
914.7 bits(1990) 0.0 401/404(99%) 0/404(0%) Plus/Minus
Query        2  RPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTSIVVLPPPGGAL*HLYSNDLNDSPTIPHRATFSAPIKLIASWKTNISSHTNRLSPKATTASTSLPLIKIPFSAMNTYGKSLTRKPSCVE*KMRSEPDL*TWKPGSDS*T*LGTFKTPSAVVTAMFLAISNALYVLSIPIARYFKYSTTASSEVPVFTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHQIEYVDXXXXXXXXXXDRALPLDFCATVPVVPWFCGCWFGTLGDLSSDTPPANCNILPTPKTRRVALNVKLMRPSSIELTECKCVL*KPQGMRK*SPEATFMTITLPPFLHLIEKLAFPTRLTVRMGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSKTRGHPHKT  1213
                RPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTSIVVLPPPGGAL*HLYSNDLNDSPTIPHRATFSAPIKLIASWKTNISSHTNRLSPKATTASTSLPLIKIPFSAMNTYGKSLTRKPSCVE*KMRSEPDL*TWKPGSDS*T*LGTFKTPSAV TAMFLAISNALYVLSIPIARYFKYSTTASSEVPVFTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHQIEYVDLPLTSLPLPSDRALPLDFCATVPVVPWFCGCWFGTLGDLSSDTPPANCNILPTPKTRRVALNVKLMRPSSIELTECKCVL*KPQGMRK*SPEATFMTITLPPFLHLIEKLAFPTRLTVRMGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSKTRGHP +T
Subject   5477  RPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTSIVVLPPPGGAL*HLYSNDLNDSPTIPHRATFSAPIKLIASWKTNISSHTNRLSPKATTASTSLPLIKIPFSAMNTYGKSLTRKPSCVE*KMRSEPDL*TWKPGSDS*T*LGTFKTPSAVATAMFLAISNALYVLSIPIARYFKYSTTASSEVPVFTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHQIEYVDLPLTSLPLPSDRALPLDFCATVPVVPWFCGCWFGTLGDLSSDTPPANCNILPTPKTRRVALNVKLMRPSSIELTECKCVL*KPQGMRK*SPEATFMTITLPPFLHLIEKLAFPTRLTVRMGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSKTRGHPDET  6688

Range 4: 5480 to 6652 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
853.8 bits(1857) 0.0 387/391(99%) 0/391(0%) Minus/Plus
Query       38  FMGVAPCLRRYLDGN*VPERL*PLLSAEVQDGWRRTIPRR**GVLSIG*PHPDSQSRGEG*LLN*V*EGW*GYGHKRGFG*LFSHALRFSKDALAFSELY*RRAHQFDV*GDSACLXXXXXXXXXXXXVG*EVTKCSKPAAAKPRYYRNGRTKVKGQGSV*GKW*GSQGEVDVLDLV*TRLRQEV*VAQG**SSDGSQTRLHPNDV*SGKNRDL*RCRRGVLEVSGYRY*ENIQGVAYG*EHCRHYC*RCFESA*SSL*ITTGLPRLQVRLRSHFSFNTRRLACEGLTVCIHS*ERYFYQGQRCRRGSSFGRQSVRM**YIGFP*CY*FDGCTESRSMWYGG*II*VVRIQML*CSPRWR*DDDASGRICQVTQ*HGHHYG*CGKF*GHKY  1210
                F+ VAPCLRRYLDGN*VPERL*PLLSAEVQDGWRRTIPRR**GVLSIG*PHPDSQSRGEG*LLN*V*EGW*GYGHKRGFG*LFSHALRFSKDALAFSELY*RRAHQFDV*GDSACLRRRQDVAVSRRRVG*EVTKCSKPAAAKPRYYRNGRTKVKGQGSV*GKW*GSQGEVDVLDLV*TRLRQEV*VAQG**SSDGSQTRLHPNDV*SGKNRDL*RCRRGVLEVSGYRY*ENIQGVAYG*EHCR YC*RCFESA*SSL*ITTGLPRLQVRLRSHFSFNTRRLACEGLTVCIHS*ERYFYQGQRCRRGSSFGRQSVRM**YI FP*CY*FDGCTESRSMWYGG*II*VVRIQML*CSPRWR*DDDASGRICQVTQ*HGHHYG*CGKF*GHKY
Subject   5480  FIRVAPCLRRYLDGN*VPERL*PLLSAEVQDGWRRTIPRR**GVLSIG*PHPDSQSRGEG*LLN*V*EGW*GYGHKRGFG*LFSHALRFSKDALAFSELY*RRAHQFDV*GDSACLRRRQDVAVSRRRVG*EVTKCSKPAAAKPRYYRNGRTKVKGQGSV*GKW*GSQGEVDVLDLV*TRLRQEV*VAQG**SSDGSQTRLHPNDV*SGKNRDL*RCRRGVLEVSGYRY*ENIQGVAYG*EHCRRYC*RCFESA*SSL*ITTGLPRLQVRLRSHFSFNTRRLACEGLTVCIHS*ERYFYQGQRCRRGSSFGRQSVRM**YISFP*CY*FDGCTESRSMWYGG*II*VVRIQML*CSPRWR*DDDASGRICQVTQ*HGHHYG*CGKF*GHKY  6652

Range 5: 5719 to 6651 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
707.6 bits(1538) 0.0 309/311(99%) 0/311(0%) Plus/Minus
Query       39  YLCPQNFPH*P*WWPCYWVT*QIRPLASSSYRHLGEHYSICIRTT*MIHPPYHIERLSVHPSN**HHGKPIYHHIRTDCRPKLLPRRHLCP**KYLSQL*IHTVSPSHASRLVLNEK*DLSLTCKRGSPVVIHKLD*ALSKHLQQ**RQCS*P*ATPCMFSQYL*PDTSSTPRRHLQRSRFLPLQTSLGCSRV*EPSLDYQP*ATHTS*RNLVHXXXXXXXXP*LPYHFPQTEPCPLTFVRPFR*YLGFAAAGLEHLVTSHPTRRRLTATSCLRRRHAESP*TSN*CALRQ*SSLNASASFENRKA*ENSH  971
                YLCPQNFPH*P*WWPCYWVT*QIRPLASSSYRHLGEHYSICIRTT*MIHPPYHIERLSVHPSN**HHGK IYHHIRTDCRPKLLPRRHLCP**KYLSQL*IHTVSPSHASRLVLNEK*DLSLTCKRGSPVVIHKLD*ALSKHLQQ* RQCS*P*ATPCMFSQYL*PDTSSTPRRHLQRSRFLPLQTSLGCSRV*EPSLDYQP*ATHTS*RNLVHTRSSTSTSP*LPYHFPQTEPCPLTFVRPFR*YLGFAAAGLEHLVTSHPTRRRLTATSCLRRRHAESP*TSN*CALRQ*SSLNASASFENRKA*ENSH
Subject   5719  YLCPQNFPH*P*WWPCYWVT*QIRPLASSSYRHLGEHYSICIRTT*MIHPPYHIERLSVHPSN**HHGKLIYHHIRTDCRPKLLPRRHLCP**KYLSQL*IHTVSPSHASRLVLNEK*DLSLTCKRGSPVVIHKLD*ALSKHLQQ*RRQCS*P*ATPCMFSQYL*PDTSSTPRRHLQRSRFLPLQTSLGCSRV*EPSLDYQP*ATHTS*RNLVHTRSSTSTSP*LPYHFPQTEPCPLTFVRPFR*YLGFAAAGLEHLVTSHPTRRRLTATSCLRRRHAESP*TSN*CALRQ*SSLNASASFENRKA*ENSH  6651

Range 6: 5479 to 5682 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
159.1 bits(341) 0.0 66/68(97%) 0/68(0%) Plus/Minus
Query     1008  SYT*LRS*PSPRD*LSGWGYPMDSTPHHRRGMVRLHPSCTSALSNGQRRSGT*LPSRYLLRHGATPIK  1211
                SYT*LRS*PSPRD*LSGWGYPMDSTPHHRRGMVRLHPSCTSALSNGQRRSGT*LPSRYLLRHGAT +K
Subject   5479  SYT*LRS*PSPRD*LSGWGYPMDSTPHHRRGMVRLHPSCTSALSNGQRRSGT*LPSRYLLRHGATLMK  5682

Range 7: 5866 to 6639 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
561.5 bits(1219) 0.0 257/258(100%) 0/258(0%) Minus/Plus
Query       51  RMRGHQVFQTSSRKTKVLPERSHKSQGARLCLREXXXXXXXXXXXXXXVNKITSRSVSGSGLIIQ*WLSNPTTPQ*RLKW*KPGPLKMPSWST*SIWL*VLREHTGRCLWLGTLPSLLLKVF*KCLIKFMNHYRASTFTSQAQISFFIQHKTACV*GTYRMYS*LRKVFLSRAKMSTR**LWATICSYVMIYWFSMMLLI*WVH*KSLDVVWWVNHLSRSNTNAIMLPQVAVRRRC*WTNLSSHPIARPPLRLMWEVL  824
                RMRGHQVFQTSSRKTKVLPERSHKSQGARLCLREVVGKSRGGRRTRSGVNKITSRSVSGSGLIIQ*WLSNPTTPQ*RLKW*KPGPLKMPSWST*SIWL*VLREHTGRCLWLGTLPSLLLKVF*KCLIKFMNHYRASTFTSQAQISFFIQHKTACV*GTYRMYS*LRKVFLSRAKMSTR**LWATICSYVMIY FSMMLLI*WVH*KSLDVVWWVNHLSRSNTNAIMLPQVAVRRRC*WTNLSSHPIARPPLRLMWEVL
Subject   5866  RMRGHQVFQTSSRKTKVLPERSHKSQGARLCLREVVGKSRGGRRTRSGVNKITSRSVSGSGLIIQ*WLSNPTTPQ*RLKW*KPGPLKMPSWST*SIWL*VLREHTGRCLWLGTLPSLLLKVF*KCLIKFMNHYRASTFTSQAQISFFIQHKTACV*GTYRMYS*LRKVFLSRAKMSTR**LWATICSYVMIY*FSMMLLI*WVH*KSLDVVWWVNHLSRSNTNAIMLPQVAVRRRC*WTNLSSHPIARPPLRLMWEVL  6639

Range 8: 5479 to 5823 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
254.5 bits(549) 0.0 113/115(98%) 0/115(0%) Minus/Plus
Query      867  FYGGGPVS*KIS*RQLSTRASLTIA*CRSTRWVEAYHSTPMMRSAIHRITPS*QSISWGRLTSQLSVGRVVRLWS*TWLRVTIFSCLAVFKGRTCIQ*ALLTKGASV*RLGRLGV  1211
                F+ GGPVS*KIS*RQLSTRASLTIA*CRSTRWVEAYHSTPMMRSAIHRITPS*QSISWGRLTSQLSVGRVVRLWS*TWLRVTIFSCLAVFKGRTCIQ*ALLTKGASV*RLGRLGV
Subject   5479  FHQGGPVS*KIS*RQLSTRASLTIA*CRSTRWVEAYHSTPMMRSAIHRITPS*QSISWGRLTSQLSVGRVVRLWS*TWLRVTIFSCLAVFKGRTCIQ*ALLTKGASV*RLGRLGV  5823

Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome

Sequence ID: KX701860.1 Length: 18020 Number of Matches: 8

Range 1: 4996 to 6207 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
947.7 bits(2062) 0.0 400/404(99%) 0/404(0%) Plus/Minus
Query        1  ETFQIRISLLHRHIYVLRTSHISRNGGRAIG*LDKFVH*HRRLTATWGSIIAFVFERLK*FTHHTTSSDFQCTHQINSIMENQYIITYEQIVAQSYYRVDIFALDKNTFLSYEYIR*VPHTQAVLC*MKNEI*A*LVNVEAR**FINLIRHFQNTFSSSDGNVPSHKQRPVCSLNTYSQILQVLHDGIFRGPGFYHFKRHWGVVGFESHHWIISPEPLTLLDVILFTPDRVRRPPLDFPTTSLRQSLAP*LLCDRSGSTLVLRLLVWNTW*PLIRHAAG*LQHPAYAEDTPSRPKRQTDAPFVNRAH*MQVRPLKTARHEKIVTRSHVYDHNLTTLPTLN*EVSLPHEIDCQDGVIRWIALLIIGVEWYASTHLVLLH*AMVKDARVLNCRQDIF*DTGPPP*N  1212
                ETFQIRISLLHRHIYVLRTSHISRNGGRAIG*LDKFVH*HRRLTATWGSIIAFVFERLK*FTHHTTSSDFQCTHQINSIMENQYIITYEQIVAQSYYRVDIFALDKNTFLSYEYIR*VPHTQAVLC*MKNEI*A*LVNVEAR**FINLIRHFQNTFSSSDGNVPSHKQRPVCSLNTYSQILQVLHDGIFRGPGFY+FKRHWGVVGFESHHWIISPEPLTLLDVILFTPDRVRRPPLDFPTTSLRQSLAP*LLCDRSGSTLVLRLLVWNTW*PLIRHAAG*LQ+PAYAEDTPSRPKRQTDAPFVNRAH*MQVRPLKTARHEKIVTRSH+YDHNLTTLPTLN*EVSLPHEIDCQDGVIRWIALLIIGVEWYASTHLVLLH*AMVKDARVLNCRQDIF*DTGPP *N
Subject   4996  ETFQIRISLLHRHIYVLRTSHISRNGGRAIG*LDKFVH*HRRLTATWGSIIAFVFERLK*FTHHTTSSDFQCTHQINSIMENQYIITYEQIVAQSYYRVDIFALDKNTFLSYEYIR*VPHTQAVLC*MKNEI*A*LVNVEAR**FINLIRHFQNTFSSSDGNVPSHKQRPVCSLNTYSQILQVLHDGIFRGPGFYYFKRHWGVVGFESHHWIISPEPLTLLDVILFTPDRVRRPPLDFPTTSLRQSLAP*LLCDRSGSTLVLRLLVWNTW*PLIRHAAG*LQYPAYAEDTPSRPKRQTDAPFVNRAH*MQVRPLKTARHEKIVTRSHIYDHNLTTLPTLN*EVSLPHEIDCQDGVIRWIALLIIGVEWYASTHLVLLH*AMVKDARVLNCRQDIF*DTGPP**N  6207

Range 2: 5005 to 6207 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
915.2 bits(1991) 0.0 398/401(99%) 0/401(0%) Minus/Plus
Query        1  GWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDERSPSXXXXXXXXXXXXXXVAQKSRGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGSDLIFHSTQDGLRVRDLPYVFIAEKGIFIKGKDVDAVVALGDNLFVCDDILVFHDAINLMGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGL  1203
                GWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGR+LQLAGGVSDERSPSVPNQQPQNQGTTGTVAQKSRGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAV TAEGVLKVPNQVYESLPGFHVYKSGSDLIFHSTQDGLRVRDLPYVFIAEKGIFIKGKDVD VVALGDNLFVCDDILVFHDAINLMGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGL
Subject   5005  GWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRILQLAGGVSDERSPSVPNQQPQNQGTTGTVAQKSRGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVATAEGVLKVPNQVYESLPGFHVYKSGSDLIFHSTQDGLRVRDLPYVFIAEKGIFIKGKDVDTVVALGDNLFVCDDILVFHDAINLMGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGL  6207

Range 3: 4995 to 6206 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
912.9 bits(1986) 0.0 400/404(99%) 0/404(0%) Plus/Minus
Query        2  RPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTSIVVLPPPGGAL*HLYSNDLNDSPTIPHRATFSAPIKLIASWKTNISSHTNRLSPKATTASTSLPLIKIPFSAMNTYGKSLTRKPSCVE*KMRSEPDL*TWKPGSDS*T*LGTFKTPSAVVTAMFLAISNALYVLSIPIARYFKYSTTASSEVPVFTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHQIEYVDXXXXXXXXXXDRALPLDFCATVPVVPWFCGCWFGTLGDLSSDTPPANCNILPTPKTRRVALNVKLMRPSSIELTECKCVL*KPQGMRK*SPEATFMTITLPPFLHLIEKLAFPTRLTVRMGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSKTRGHPHKT  1213
                RPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTSIVVLPPPGGAL*HLYSNDLNDSPTIPHRATFSAPIKLIASWKTNISSHTNRLSPKATT STSLPLIKIPFSAMNTYGKSLTRKPSCVE*KMRSEPDL*TWKPGSDS*T*LGTFKTPSAV TAMFLAISNALYVLSIPIARYFKYSTTASSEVPVFTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHQIEYVDLPLTSLPLPSDRALPLDFCATVPVVPWFCGCWFGTLGDLSSDTPPANCNILPTPKTRRVALNVKLMRPSSIELTECKCVL*KPQGMRK*SPEATFMTITLPPFLHLIEKLAFPTRLTVRMGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSKTRGHP +T
Subject   4995  RPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTSIVVLPPPGGAL*HLYSNDLNDSPTIPHRATFSAPIKLIASWKTNISSHTNRLSPKATTVSTSLPLIKIPFSAMNTYGKSLTRKPSCVE*KMRSEPDL*TWKPGSDS*T*LGTFKTPSAVATAMFLAISNALYVLSIPIARYFKYSTTASSEVPVFTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHQIEYVDLPLTSLPLPSDRALPLDFCATVPVVPWFCGCWFGTLGDLSSDTPPANCNILPTPKTRRVALNVKLMRPSSIELTECKCVL*KPQGMRK*SPEATFMTITLPPFLHLIEKLAFPTRLTVRMGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSKTRGHPDET  6206

Range 4: 4998 to 6170 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
847.8 bits(1844) 0.0 384/391(98%) 0/391(0%) Minus/Plus
Query       38  FMGVAPCLRRYLDGN*VPERL*PLLSAEVQDGWRRTIPRR**GVLSIG*PHPDSQSRGEG*LLN*V*EGW*GYGHKRGFG*LFSHALRFSKDALAFSELY*RRAHQFDV*GDSACLXXXXXXXXXXXXVG*EVTKCSKPAAAKPRYYRNGRTKVKGQGSV*GKW*GSQGEVDVLDLV*TRLRQEV*VAQG**SSDGSQTRLHPNDV*SGKNRDL*RCRRGVLEVSGYRY*ENIQGVAYG*EHCRHYC*RCFESA*SSL*ITTGLPRLQVRLRSHFSFNTRRLACEGLTVCIHS*ERYFYQGQRCRRGSSFGRQSVRM**YIGFP*CY*FDGCTESRSMWYGG*II*VVRIQML*CSPRWR*DDDASGRICQVTQ*HGHHYG*CGKF*GHKY  1210
                F+ VAPCLRRYLDGN*VPERL*PLLSAEVQDGWRRTIPRR**GVLSIG*PHPDSQSRGEG*LLN*V*EGW*GYGHK GFG*LFSHALRFSKDALAFSELY*RRAHQFDV*GDSACLRRRQD+AVSRRRVG*EVTKCSKPAAAKPRYYRNGRTKVKGQGSV*GKW*GSQGEVDVLDLV*TRLRQEV*VAQG**SSDGSQTRLHPNDV*S KNRDL*RCRRGVLEVSGYRY*ENIQGVAYG*EHCR YC*RCFESA*SSL*ITTGLPRLQVRLRSHFSFNTRRLACEGLTVCIHS*ERYFYQGQRCR GSSFGRQSVRM**YIGFP*CY*FDGCTESRSMWYGG*II*VVRIQML*CSPRWR*DDDASGRICQVTQ*HGHHYG*CGKF*GHKY
Subject   4998  FIRVAPCLRRYLDGN*VPERL*PLLSAEVQDGWRRTIPRR**GVLSIG*PHPDSQSRGEG*LLN*V*EGW*GYGHKCGFG*LFSHALRFSKDALAFSELY*RRAHQFDV*GDSACLRRRQDIAVSRRRVG*EVTKCSKPAAAKPRYYRNGRTKVKGQGSV*GKW*GSQGEVDVLDLV*TRLRQEV*VAQG**SSDGSQTRLHPNDV*SSKNRDL*RCRRGVLEVSGYRY*ENIQGVAYG*EHCRRYC*RCFESA*SSL*ITTGLPRLQVRLRSHFSFNTRRLACEGLTVCIHS*ERYFYQGQRCRHGSSFGRQSVRM**YIGFP*CY*FDGCTESRSMWYGG*II*VVRIQML*CSPRWR*DDDASGRICQVTQ*HGHHYG*CGKF*GHKY  6170

Range 5: 5237 to 6169 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
701.2 bits(1524) 0.0 307/311(99%) 0/311(0%) Plus/Minus
Query       39  YLCPQNFPH*P*WWPCYWVT*QIRPLASSSYRHLGEHYSICIRTT*MIHPPYHIERLSVHPSN**HHGKPIYHHIRTDCRPKLLPRRHLCP**KYLSQL*IHTVSPSHASRLVLNEK*DLSLTCKRGSPVVIHKLD*ALSKHLQQ**RQCS*P*ATPCMFSQYL*PDTSSTPRRHLQRSRFLPLQTSLGCSRV*EPSLDYQP*ATHTS*RNLVHXXXXXXXXP*LPYHFPQTEPCPLTFVRPFR*YLGFAAAGLEHLVTSHPTRRRLTATSCLRRRHAESP*TSN*CALRQ*SSLNASASFENRKA*ENSH  971
                YLCPQNFPH*P*WWPCYWVT*QIRPLASSSYRHLGEHYSICIRTT*MIHPPYHIERLSVHPSN**HHGKPIYHHIRTDCRPKLLP RHLCP**KYLSQL*IHTVSPSHASRLVLNEK*DLSLTCKRGSPVVIHKLD*ALSKHLQQ* RQCS*P*ATPCMFSQYL*PDTSSTPRRHLQRSRFL LQTSLGCSRV*EPSLDYQP*ATHTS*RNLVHTRSSTSTSP*LPYHFPQTEPCPLTFVRPFR*YLGFAAAGLEHLVTSHPTRRRLTA SCLRRRHAESP*TSN*CALRQ*SSLNASASFENRKA*ENSH
Subject   5237  YLCPQNFPH*P*WWPCYWVT*QIRPLASSSYRHLGEHYSICIRTT*MIHPPYHIERLSVHPSN**HHGKPIYHHIRTDCRPKLLPCRHLCP**KYLSQL*IHTVSPSHASRLVLNEK*DLSLTCKRGSPVVIHKLD*ALSKHLQQ*RRQCS*P*ATPCMFSQYL*PDTSSTPRRHLQRSRFLLLQTSLGCSRV*EPSLDYQP*ATHTS*RNLVHTRSSTSTSP*LPYHFPQTEPCPLTFVRPFR*YLGFAAAGLEHLVTSHPTRRRLTAISCLRRRHAESP*TSN*CALRQ*SSLNASASFENRKA*ENSH  6169

Range 6: 4997 to 5200 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
159.1 bits(341) 0.0 66/68(97%) 0/68(0%) Plus/Minus
Query     1008  SYT*LRS*PSPRD*LSGWGYPMDSTPHHRRGMVRLHPSCTSALSNGQRRSGT*LPSRYLLRHGATPIK  1211
                SYT*LRS*PSPRD*LSGWGYPMDSTPHHRRGMVRLHPSCTSALSNGQRRSGT*LPSRYLLRHGAT +K
Subject   4997  SYT*LRS*PSPRD*LSGWGYPMDSTPHHRRGMVRLHPSCTSALSNGQRRSGT*LPSRYLLRHGATLMK  5200

Range 7: 5384 to 6157 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
561.5 bits(1219) 0.0 257/258(100%) 0/258(0%) Minus/Plus
Query       51  RMRGHQVFQTSSRKTKVLPERSHKSQGARLCLREXXXXXXXXXXXXXXVNKITSRSVSGSGLIIQ*WLSNPTTPQ*RLKW*KPGPLKMPSWST*SIWL*VLREHTGRCLWLGTLPSLLLKVF*KCLIKFMNHYRASTFTSQAQISFFIQHKTACV*GTYRMYS*LRKVFLSRAKMSTR**LWATICSYVMIYWFSMMLLI*WVH*KSLDVVWWVNHLSRSNTNAIMLPQVAVRRRC*WTNLSSHPIARPPLRLMWEVL  824
                RMRGHQVFQTSSRKTKVLPERSHKSQGARLCLREVVGKSRGGRRTRSGVNKITSRSVSGSGLIIQ*WLSNPTTPQ*RLK *KPGPLKMPSWST*SIWL*VLREHTGRCLWLGTLPSLLLKVF*KCLIKFMNHYRASTFTSQAQISFFIQHKTACV*GTYRMYS*LRKVFLSRAKMSTR**LWATICSYVMIYWFSMMLLI*WVH*KSLDVVWWVNHLSRSNTNAIMLPQVAVRRRC*WTNLSSHPIARPPLRLMWEVL
Subject   5384  RMRGHQVFQTSSRKTKVLPERSHKSQGARLCLREVVGKSRGGRRTRSGVNKITSRSVSGSGLIIQ*WLSNPTTPQ*RLK**KPGPLKMPSWST*SIWL*VLREHTGRCLWLGTLPSLLLKVF*KCLIKFMNHYRASTFTSQAQISFFIQHKTACV*GTYRMYS*LRKVFLSRAKMSTR**LWATICSYVMIYWFSMMLLI*WVH*KSLDVVWWVNHLSRSNTNAIMLPQVAVRRRC*WTNLSSHPIARPPLRLMWEVL  6157

Range 8: 4997 to 5341 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
251.7 bits(543) 0.0 112/115(97%) 0/115(0%) Minus/Plus
Query      867  FYGGGPVS*KIS*RQLSTRASLTIA*CRSTRWVEAYHSTPMMRSAIHRITPS*QSISWGRLTSQLSVGRVVRLWS*TWLRVTIFSCLAVFKGRTCIQ*ALLTKGASV*RLGRLGV  1211
                F+ GGPVS*KIS*RQLSTRASLTIA*CRSTRWVEAYHSTPMMRSAIHRITPS*QSISWGRLTSQLSVGRVVRLWS* WLRVTIFSCLAVFKGRTCIQ*ALLTKGASV*RLGRLGV
Subject   4997  FHQGGPVS*KIS*RQLSTRASLTIA*CRSTRWVEAYHSTPMMRSAIHRITPS*QSISWGRLTSQLSVGRVVRLWS*MWLRVTIFSCLAVFKGRTCIQ*ALLTKGASV*RLGRLGV  5341

Grapevine leafroll associated virus 3 isolate 623, complete genome

Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 8

Range 1: 5478 to 6689 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
939.5 bits(2044) 0.0 399/404(99%) 0/404(0%) Plus/Minus
Query        1  ETFQIRISLLHRHIYVLRTSHISRNGGRAIG*LDKFVH*HRRLTATWGSIIAFVFERLK*FTHHTTSSDFQCTHQINSIMENQYIITYEQIVAQSYYRVDIFALDKNTFLSYEYIR*VPHTQAVLC*MKNEI*A*LVNVEAR**FINLIRHFQNTFSSSDGNVPSHKQRPVCSLNTYSQILQVLHDGIFRGPGFYHFKRHWGVVGFESHHWIISPEPLTLLDVILFTPDRVRRPPLDFPTTSLRQSLAP*LLCDRSGSTLVLRLLVWNTW*PLIRHAAG*LQHPAYAEDTPSRPKRQTDAPFVNRAH*MQVRPLKTARHEKIVTRSHVYDHNLTTLPTLN*EVSLPHEIDCQDGVIRWIALLIIGVEWYASTHLVLLH*AMVKDARVLNCRQDIF*DTGPPP*N  1212
                ETFQIRISLLHRHIYVLRTSHISRNGGRAI *LDKFVH*HRRLTATWGSIIAFVFERLK*FTHHTTSSDFQCTHQINSIMENQYIITYEQIVAQSYYRVDIFALDKNTFLSYEYIR*VPHTQAVLC*MKNEI*A*LVNVEAR**FINLIRHFQNTFSSSDGNVPSHKQRPVCSLNTYSQILQVLH+GIFRGPGFYHFKRHWGVVGFESHH IISPEP TLLDVILFTPDRVRRPPLDFPTTSLRQSLAP*LLCDRSGSTLVLRLLVWNTW*PLIRHAAG*LQHPAYAEDTPSRPKRQTDAPFVNRAH*MQVRPLKTARHEKIVTRSHVYDHNLTTLPTLN*EVSLPHEIDCQDGVIRWIALLIIGVEWYASTHLVLLH*AMVKDARVLNCRQDIF*DTGPP *N
Subject   5478  ETFQIRISLLHRHIYVLRTSHISRNGGRAIR*LDKFVH*HRRLTATWGSIIAFVFERLK*FTHHTTSSDFQCTHQINSIMENQYIITYEQIVAQSYYRVDIFALDKNTFLSYEYIR*VPHTQAVLC*MKNEI*A*LVNVEAR**FINLIRHFQNTFSSSDGNVPSHKQRPVCSLNTYSQILQVLHNGIFRGPGFYHFKRHWGVVGFESHHRIISPEPFTLLDVILFTPDRVRRPPLDFPTTSLRQSLAP*LLCDRSGSTLVLRLLVWNTW*PLIRHAAG*LQHPAYAEDTPSRPKRQTDAPFVNRAH*MQVRPLKTARHEKIVTRSHVYDHNLTTLPTLN*EVSLPHEIDCQDGVIRWIALLIIGVEWYASTHLVLLH*AMVKDARVLNCRQDIF*DTGPP**N  6689

Range 2: 5487 to 6689 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
918.9 bits(1999) 0.0 400/401(100%) 0/401(0%) Minus/Plus
Query        1  GWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDERSPSXXXXXXXXXXXXXXVAQKSRGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGSDLIFHSTQDGLRVRDLPYVFIAEKGIFIKGKDVDAVVALGDNLFVCDDILVFHDAINLMGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGL  1203
                GWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDERSPSVPNQQPQNQGTTGTVAQKSRGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAV TAEGVLKVPNQVYESLPGFHVYKSGSDLIFHSTQDGLRVRDLPYVFIAEKGIFIKGKDVDAVVALGDNLFVCDDILVFHDAINLMGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGL
Subject   5487  GWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDERSPSVPNQQPQNQGTTGTVAQKSRGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVATAEGVLKVPNQVYESLPGFHVYKSGSDLIFHSTQDGLRVRDLPYVFIAEKGIFIKGKDVDAVVALGDNLFVCDDILVFHDAINLMGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGL  6689

Range 3: 5477 to 6688 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
913.4 bits(1987) 0.0 400/404(99%) 0/404(0%) Plus/Minus
Query        2  RPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTSIVVLPPPGGAL*HLYSNDLNDSPTIPHRATFSAPIKLIASWKTNISSHTNRLSPKATTASTSLPLIKIPFSAMNTYGKSLTRKPSCVE*KMRSEPDL*TWKPGSDS*T*LGTFKTPSAVVTAMFLAISNALYVLSIPIARYFKYSTTASSEVPVFTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHQIEYVDXXXXXXXXXXDRALPLDFCATVPVVPWFCGCWFGTLGDLSSDTPPANCNILPTPKTRRVALNVKLMRPSSIELTECKCVL*KPQGMRK*SPEATFMTITLPPFLHLIEKLAFPTRLTVRMGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSKTRGHPHKT  1213
                RPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTSIVVLPPPGGAL*HLYSNDLNDSPTIPHRATFSAPIKLIASWKTNISSHTN+LSPKATTASTSLPLIKIPFSAMNTYGKSLTRKPSCVE*KMRSEPDL*TWKPGSDS*T*LGTFKTPSAV TAMFLAISNALYVLSIPIARYFKYSTTASSEVPVFTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHQIEYVDLPLTSLPLPSDRALPLDFCATVPVVPWFCGCWFGTLGDLSSDTPPANCNILPTPKTRRVALNVKLMRPSSIELTECKCVL*KPQGMRK*SPEATFMTITLPPFLHLIEKLAFPTRLTVRMGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSKTRGHP +T
Subject   5477  RPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTSIVVLPPPGGAL*HLYSNDLNDSPTIPHRATFSAPIKLIASWKTNISSHTNKLSPKATTASTSLPLIKIPFSAMNTYGKSLTRKPSCVE*KMRSEPDL*TWKPGSDS*T*LGTFKTPSAVATAMFLAISNALYVLSIPIARYFKYSTTASSEVPVFTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHQIEYVDLPLTSLPLPSDRALPLDFCATVPVVPWFCGCWFGTLGDLSSDTPPANCNILPTPKTRRVALNVKLMRPSSIELTECKCVL*KPQGMRK*SPEATFMTITLPPFLHLIEKLAFPTRLTVRMGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSKTRGHPDET  6688

Range 4: 5480 to 6652 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
842.8 bits(1833) 0.0 383/391(98%) 0/391(0%) Minus/Plus
Query       38  FMGVAPCLRRYLDGN*VPERL*PLLSAEVQDGWRRTIPRR**GVLSIG*PHPDSQSRGEG*LLN*V*EGW*GYGHKRGFG*LFSHALRFSKDALAFSELY*RRAHQFDV*GDSACLXXXXXXXXXXXXVG*EVTKCSKPAAAKPRYYRNGRTKVKGQGSV*GKW*GSQGEVDVLDLV*TRLRQEV*VAQG**SSDGSQTRLHPNDV*SGKNRDL*RCRRGVLEVSGYRY*ENIQGVAYG*EHCRHYC*RCFESA*SSL*ITTGLPRLQVRLRSHFSFNTRRLACEGLTVCIHS*ERYFYQGQRCRRGSSFGRQSVRM**YIGFP*CY*FDGCTESRSMWYGG*II*VVRIQML*CSPRWR*DDDASGRICQVTQ*HGHHYG*CGKF*GHKY  1210
                F+ VAPCLRRYLDGN*VPERL*PLLSAEVQDGWRRTIPRR**GVLSIG*PHPDSQSRGEG*LLN*V*EGW*GYGHKRGFG*LFSHALRFSKDALAFSELY*RRAHQFDV*GDSACLRRRQDVAVSRRRVG*EVTKCSKPAAAKPRYYRNGRTKVKGQGSV*GKW*GSQGEVDVLDLV*TRLRQEV*+AQG**S DGSQTRLHPNDV*SGKNRDL*RCR GVLEVSGYRY*ENIQGVAYG*EHCR YC*RCFESA*SSL*ITTGLPRLQVRLRSHFSFNTRRLACEGLTVCIHS*ERYFYQGQRCRRGSSFGRQ VRM**YIGFP*CY*FDGCTESRSMWYGG*II*VVRIQML*CSPRWR*DDDASGRICQVT *HGHHYG*CGKF*GHKY
Subject   5480  FIRVAPCLRRYLDGN*VPERL*PLLSAEVQDGWRRTIPRR**GVLSIG*PHPDSQSRGEG*LLN*V*EGW*GYGHKRGFG*LFSHALRFSKDALAFSELY*RRAHQFDV*GDSACLRRRQDVAVSRRRVG*EVTKCSKPAAAKPRYYRNGRTKVKGQGSV*GKW*GSQGEVDVLDLV*TRLRQEV*MAQG**SGDGSQTRLHPNDV*SGKNRDL*RCRCGVLEVSGYRY*ENIQGVAYG*EHCRRYC*RCFESA*SSL*ITTGLPRLQVRLRSHFSFNTRRLACEGLTVCIHS*ERYFYQGQRCRRGSSFGRQFVRM**YIGFP*CY*FDGCTESRSMWYGG*II*VVRIQML*CSPRWR*DDDASGRICQVT**HGHHYG*CGKF*GHKY  6652

Range 5: 5719 to 6651 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
695.3 bits(1511) 0.0 305/311(98%) 0/311(0%) Plus/Minus
Query       39  YLCPQNFPH*P*WWPCYWVT*QIRPLASSSYRHLGEHYSICIRTT*MIHPPYHIERLSVHPSN**HHGKPIYHHIRTDCRPKLLPRRHLCP**KYLSQL*IHTVSPSHASRLVLNEK*DLSLTCKRGSPVVIHKLD*ALSKHLQQ**RQCS*P*ATPCMFSQYL*PDTSSTPRRHLQRSRFLPLQTSLGCSRV*EPSLDYQP*ATHTS*RNLVHXXXXXXXXP*LPYHFPQTEPCPLTFVRPFR*YLGFAAAGLEHLVTSHPTRRRLTATSCLRRRHAESP*TSN*CALRQ*SSLNASASFENRKA*ENSH  971
                YLCPQNFPH*P*WWPCY VT*QIRPLASSSYRHLGEHYSICIRTT*MIHPPYHIERLSVHPSN**HHGKPIYHHIRT+CRPKLLPRRHLCP**KYLSQL*IHTVSPSHASRLVLNEK*DLSLTCKRGSPVVIHKLD*ALSKHLQQ* RQCS*P*ATPCMFSQYL*PDTSSTP+RHLQRSRFLPLQTSLGCSRV*EPS DYQP*A HTS*RNLVHTRSSTSTSP*LPYHFPQTEPCPLTFVRPFR*YLGFAAAGLEHLVTSHPTRRRLTATSCLRRRHAESP*TSN*CALRQ*SSLNASASFENRKA*ENSH
Subject   5719  YLCPQNFPH*P*WWPCY*VT*QIRPLASSSYRHLGEHYSICIRTT*MIHPPYHIERLSVHPSN**HHGKPIYHHIRTNCRPKLLPRRHLCP**KYLSQL*IHTVSPSHASRLVLNEK*DLSLTCKRGSPVVIHKLD*ALSKHLQQ*RRQCS*P*ATPCMFSQYL*PDTSSTPQRHLQRSRFLPLQTSLGCSRV*EPSPDYQP*AIHTS*RNLVHTRSSTSTSP*LPYHFPQTEPCPLTFVRPFR*YLGFAAAGLEHLVTSHPTRRRLTATSCLRRRHAESP*TSN*CALRQ*SSLNASASFENRKA*ENSH  6651

Range 6: 5479 to 5682 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
159.1 bits(341) 0.0 66/68(97%) 0/68(0%) Plus/Minus
Query     1008  SYT*LRS*PSPRD*LSGWGYPMDSTPHHRRGMVRLHPSCTSALSNGQRRSGT*LPSRYLLRHGATPIK  1211
                SYT*LRS*PSPRD*LSGWGYPMDSTPHHRRGMVRLHPSCTSALSNGQRRSGT*LPSRYLLRHGAT +K
Subject   5479  SYT*LRS*PSPRD*LSGWGYPMDSTPHHRRGMVRLHPSCTSALSNGQRRSGT*LPSRYLLRHGATLMK  5682

Range 7: 5866 to 6639 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
557.8 bits(1211) 0.0 254/258(98%) 0/258(0%) Minus/Plus
Query       51  RMRGHQVFQTSSRKTKVLPERSHKSQGARLCLREXXXXXXXXXXXXXXVNKITSRSVSGSGLIIQ*WLSNPTTPQ*RLKW*KPGPLKMPSWST*SIWL*VLREHTGRCLWLGTLPSLLLKVF*KCLIKFMNHYRASTFTSQAQISFFIQHKTACV*GTYRMYS*LRKVFLSRAKMSTR**LWATICSYVMIYWFSMMLLI*WVH*KSLDVVWWVNHLSRSNTNAIMLPQVAVRRRC*WTNLSSHPIARPPLRLMWEVL  824
                RMRGHQVFQTSSRKTKVLPERSHKSQGARLCLREVVGKSRGGRRTRSGVNKITSRSV+GSGLII+*WLSNPTTPQ*RLKW*KPGPLKMP WST*SIWL*VLREHTGRCLWLGTLPSLLLKVF*KCLIKFMNHYRASTFTSQAQISFFIQHKTACV*GTYRMYS*LRKVFLSRAKMSTR**LWATICSYVMIYWFSMMLLI*WVH*KSLDVVWWVNHLSRSNTNAIMLPQVAVRRRC*WTNLSSH IARPPLRLMWEVL
Subject   5866  RMRGHQVFQTSSRKTKVLPERSHKSQGARLCLREVVGKSRGGRRTRSGVNKITSRSVNGSGLIIR*WLSNPTTPQ*RLKW*KPGPLKMPLWST*SIWL*VLREHTGRCLWLGTLPSLLLKVF*KCLIKFMNHYRASTFTSQAQISFFIQHKTACV*GTYRMYS*LRKVFLSRAKMSTR**LWATICSYVMIYWFSMMLLI*WVH*KSLDVVWWVNHLSRSNTNAIMLPQVAVRRRC*WTNLSSHLIARPPLRLMWEVL  6639

Range 8: 5479 to 5823 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
254.5 bits(549) 0.0 113/115(98%) 0/115(0%) Minus/Plus
Query      867  FYGGGPVS*KIS*RQLSTRASLTIA*CRSTRWVEAYHSTPMMRSAIHRITPS*QSISWGRLTSQLSVGRVVRLWS*TWLRVTIFSCLAVFKGRTCIQ*ALLTKGASV*RLGRLGV  1211
                F+ GGPVS*KIS*RQLSTRASLTIA*CRSTRWVEAYHSTPMMRSAIHRITPS*QSISWGRLTSQLSVGRVVRLWS*TWLRVTIFSCLAVFKGRTCIQ*ALLTKGASV*RLGRLGV
Subject   5479  FHQGGPVS*KIS*RQLSTRASLTIA*CRSTRWVEAYHSTPMMRSAIHRITPS*QSISWGRLTSQLSVGRVVRLWS*TWLRVTIFSCLAVFKGRTCIQ*ALLTKGASV*RLGRLGV  5823

Grapevine leafroll associated virus 3 isolate GP18, complete genome

Sequence ID: EU259806.1 Length: 18498 Number of Matches: 8

Range 1: 5478 to 6689 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
938.1 bits(2041) 0.0 398/404(99%) 0/404(0%) Plus/Minus
Query        1  ETFQIRISLLHRHIYVLRTSHISRNGGRAIG*LDKFVH*HRRLTATWGSIIAFVFERLK*FTHHTTSSDFQCTHQINSIMENQYIITYEQIVAQSYYRVDIFALDKNTFLSYEYIR*VPHTQAVLC*MKNEI*A*LVNVEAR**FINLIRHFQNTFSSSDGNVPSHKQRPVCSLNTYSQILQVLHDGIFRGPGFYHFKRHWGVVGFESHHWIISPEPLTLLDVILFTPDRVRRPPLDFPTTSLRQSLAP*LLCDRSGSTLVLRLLVWNTW*PLIRHAAG*LQHPAYAEDTPSRPKRQTDAPFVNRAH*MQVRPLKTARHEKIVTRSHVYDHNLTTLPTLN*EVSLPHEIDCQDGVIRWIALLIIGVEWYASTHLVLLH*AMVKDARVLNCRQDIF*DTGPPP*N  1212
                ETFQIRISLLHRHIYVLRTSHISRNGGRAIG*LDKFVH*HRRLTATWGSIIAFVFERLK*FTHHTTSSDFQCTHQINSIMENQYIITYEQIVAQS YRVDIFALDKNTFLSYEYIR*VPHTQAVLC*MKNEI*A*LVNVEAR**FINLIRHFQNTFSSSDGNVPSHKQRPVCSLNTYSQILQVLHDGIFRGPGF HFKRHWGVVGFESHHWIISPEPLTLLDVILFTPDRVRRPPLDFPTTSLRQSLAP*LLCDRSGSTLVL+LLVWNTW*PLIR AAG*LQHPAYAEDTPSRPKRQTDAPFVNRAH*MQVRPLKTARHEKIVTRSHVYDHN TTLPTLN*EVSLPHEIDCQDGVIRWIALLIIGVEWYASTHLVLLH*AMVKDARVLNCRQDIF*DTGPP *N
Subject   5478  ETFQIRISLLHRHIYVLRTSHISRNGGRAIG*LDKFVH*HRRLTATWGSIIAFVFERLK*FTHHTTSSDFQCTHQINSIMENQYIITYEQIVAQSCYRVDIFALDKNTFLSYEYIR*VPHTQAVLC*MKNEI*A*LVNVEAR**FINLIRHFQNTFSSSDGNVPSHKQRPVCSLNTYSQILQVLHDGIFRGPGFNHFKRHWGVVGFESHHWIISPEPLTLLDVILFTPDRVRRPPLDFPTTSLRQSLAP*LLCDRSGSTLVLQLLVWNTW*PLIRRAAG*LQHPAYAEDTPSRPKRQTDAPFVNRAH*MQVRPLKTARHEKIVTRSHVYDHNFTTLPTLN*EVSLPHEIDCQDGVIRWIALLIIGVEWYASTHLVLLH*AMVKDARVLNCRQDIF*DTGPP**N  6689

Range 2: 5487 to 6689 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
915.2 bits(1991) 0.0 397/401(99%) 0/401(0%) Minus/Plus
Query        1  GWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDERSPSXXXXXXXXXXXXXXVAQKSRGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGSDLIFHSTQDGLRVRDLPYVFIAEKGIFIKGKDVDAVVALGDNLFVCDDILVFHDAINLMGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGL  1203
                GWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGG SDERSPSVPNQQ QNQGTTGTVAQKSRGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAV TAEGVLKVPNQVYESLPGFHVYKSGSDLIFHSTQDGLRVRDLPYVFIAEKGIFIKGKDVDAV ALGDNLFVCDDILVFHDAINLMGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGL
Subject   5487  GWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGASDERSPSVPNQQLQNQGTTGTVAQKSRGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVATAEGVLKVPNQVYESLPGFHVYKSGSDLIFHSTQDGLRVRDLPYVFIAEKGIFIKGKDVDAVAALGDNLFVCDDILVFHDAINLMGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGL  6689

Range 3: 5477 to 6688 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
904.7 bits(1968) 0.0 397/404(98%) 0/404(0%) Plus/Minus
Query        2  RPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTSIVVLPPPGGAL*HLYSNDLNDSPTIPHRATFSAPIKLIASWKTNISSHTNRLSPKATTASTSLPLIKIPFSAMNTYGKSLTRKPSCVE*KMRSEPDL*TWKPGSDS*T*LGTFKTPSAVVTAMFLAISNALYVLSIPIARYFKYSTTASSEVPVFTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHQIEYVDXXXXXXXXXXDRALPLDFCATVPVVPWFCGCWFGTLGDLSSDTPPANCNILPTPKTRRVALNVKLMRPSSIELTECKCVL*KPQGMRK*SPEATFMTITLPPFLHLIEKLAFPTRLTVRMGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSKTRGHPHKT  1213
                RPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTSIVVLPPPGGAL*HLYSNDLNDSPTIPHRATFSAPIKLIASWKTNISSHTNRLSPKA TASTSLPLIKIPFSAMNTYGKSLTRKPSCVE*KMRSEPDL*TWKPGSDS*T*LGTFKTPSAV TAMFLAISNALYVLSIPIARYFKYSTTASSEVPV TTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHQIEYVDLPLTSLPLPSDRALPLDFCATVPVVPWFC CWFGTLGDLSSD PPANCNILPTPKTRRVALNVKLMRPSSIELTECKCVL*KPQGMRK*SPEATFMTITLPPFLHLIEKLAFPTRLTVRMGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSKTRGHP +T
Subject   5477  RPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTSIVVLPPPGGAL*HLYSNDLNDSPTIPHRATFSAPIKLIASWKTNISSHTNRLSPKAATASTSLPLIKIPFSAMNTYGKSLTRKPSCVE*KMRSEPDL*TWKPGSDS*T*LGTFKTPSAVATAMFLAISNALYVLSIPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHQIEYVDLPLTSLPLPSDRALPLDFCATVPVVPWFCSCWFGTLGDLSSDAPPANCNILPTPKTRRVALNVKLMRPSSIELTECKCVL*KPQGMRK*SPEATFMTITLPPFLHLIEKLAFPTRLTVRMGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSKTRGHPDET  6688

Range 4: 5480 to 6652 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
846.5 bits(1841) 0.0 385/391(98%) 0/391(0%) Minus/Plus
Query       38  FMGVAPCLRRYLDGN*VPERL*PLLSAEVQDGWRRTIPRR**GVLSIG*PHPDSQSRGEG*LLN*V*EGW*GYGHKRGFG*LFSHALRFSKDALAFSELY*RRAHQFDV*GDSACLXXXXXXXXXXXXVG*EVTKCSKPAAAKPRYYRNGRTKVKGQGSV*GKW*GSQGEVDVLDLV*TRLRQEV*VAQG**SSDGSQTRLHPNDV*SGKNRDL*RCRRGVLEVSGYRY*ENIQGVAYG*EHCRHYC*RCFESA*SSL*ITTGLPRLQVRLRSHFSFNTRRLACEGLTVCIHS*ERYFYQGQRCRRGSSFGRQSVRM**YIGFP*CY*FDGCTESRSMWYGG*II*VVRIQML*CSPRWR*DDDASGRICQVTQ*HGHHYG*CGKF*GHKY  1210
                F+ VAPCLRRYLDGN*VPERL*PLLSAEVQDGWRRTIPRR**GVLSIG*PHPDSQSRGEG*LLN*V*EGW* YGHKRGFG*LFSHALRFSKDALAFSELY*RRAHQFDV*GDSACLRRRQDVAVSRRRVG*EVTKCSKPAAAKPRYYRNGRTKVKGQGSV*GKW*GSQGEVDVLDLV*TRLRQEV*VAQG**SSDGSQTRLHPNDV*SG NRDL*RCRRGVLEVSGYRY*ENIQGVAYG*EHCR YC*RCFESA*SSL*ITTGLPRLQVRLRSHFSFNT RLACEGLTVCIHS*ERYFYQGQRCRRGSSFGRQSVRM**YIGFP*CY*FDGCTESRSMWYGG*II*VVRIQML*CSPRWR*DDDASGRICQVTQ*HGHHYG*CGKF*GHKY
Subject   5480  FIRVAPCLRRYLDGN*VPERL*PLLSAEVQDGWRRTIPRR**GVLSIG*PHPDSQSRGEG*LLN*V*EGW*SYGHKRGFG*LFSHALRFSKDALAFSELY*RRAHQFDV*GDSACLRRRQDVAVSRRRVG*EVTKCSKPAAAKPRYYRNGRTKVKGQGSV*GKW*GSQGEVDVLDLV*TRLRQEV*VAQG**SSDGSQTRLHPNDV*SG*NRDL*RCRRGVLEVSGYRY*ENIQGVAYG*EHCRRYC*RCFESA*SSL*ITTGLPRLQVRLRSHFSFNTGRLACEGLTVCIHS*ERYFYQGQRCRRGSSFGRQSVRM**YIGFP*CY*FDGCTESRSMWYGG*II*VVRIQML*CSPRWR*DDDASGRICQVTQ*HGHHYG*CGKF*GHKY  6652

Range 5: 5719 to 6651 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
705.3 bits(1533) 0.0 308/311(99%) 0/311(0%) Plus/Minus
Query       39  YLCPQNFPH*P*WWPCYWVT*QIRPLASSSYRHLGEHYSICIRTT*MIHPPYHIERLSVHPSN**HHGKPIYHHIRTDCRPKLLPRRHLCP**KYLSQL*IHTVSPSHASRLVLNEK*DLSLTCKRGSPVVIHKLD*ALSKHLQQ**RQCS*P*ATPCMFSQYL*PDTSSTPRRHLQRSRFLPLQTSLGCSRV*EPSLDYQP*ATHTS*RNLVHXXXXXXXXP*LPYHFPQTEPCPLTFVRPFR*YLGFAAAGLEHLVTSHPTRRRLTATSCLRRRHAESP*TSN*CALRQ*SSLNASASFENRKA*ENSH  971
                YLCPQNFPH*P*WWPCYWVT*QIRPLASSSYRHLGEHYSICIRTT*MIHPPYHIERLSVHPSN**HHGKPIYHHIRTDCRPKLLPRRHLCP**KYLSQL*IHTVSPSHASR VLNEK*DLSLTCKRGSPVVIHKLD*ALSKHLQQ* RQCS*P*ATPCMFSQYL*PDTSSTPRRHLQRSRF PLQTSLGCSRV*EPSLDYQP*ATHTS*RNLVHTRSSTSTSP*LPYHFPQTEPCPLTFVRPFR*YLGFAAAGLEHLVTSHPTRRRLTATSCLRRRHAESP*TSN*CALRQ*SSLNASASFENRKA*ENSH
Subject   5719  YLCPQNFPH*P*WWPCYWVT*QIRPLASSSYRHLGEHYSICIRTT*MIHPPYHIERLSVHPSN**HHGKPIYHHIRTDCRPKLLPRRHLCP**KYLSQL*IHTVSPSHASRPVLNEK*DLSLTCKRGSPVVIHKLD*ALSKHLQQ*RRQCS*P*ATPCMFSQYL*PDTSSTPRRHLQRSRF*PLQTSLGCSRV*EPSLDYQP*ATHTS*RNLVHTRSSTSTSP*LPYHFPQTEPCPLTFVRPFR*YLGFAAAGLEHLVTSHPTRRRLTATSCLRRRHAESP*TSN*CALRQ*SSLNASASFENRKA*ENSH  6651

Range 6: 5479 to 5682 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
159.1 bits(341) 0.0 66/68(97%) 0/68(0%) Plus/Minus
Query     1008  SYT*LRS*PSPRD*LSGWGYPMDSTPHHRRGMVRLHPSCTSALSNGQRRSGT*LPSRYLLRHGATPIK  1211
                SYT*LRS*PSPRD*LSGWGYPMDSTPHHRRGMVRLHPSCTSALSNGQRRSGT*LPSRYLLRHGAT +K
Subject   5479  SYT*LRS*PSPRD*LSGWGYPMDSTPHHRRGMVRLHPSCTSALSNGQRRSGT*LPSRYLLRHGATLMK  5682

Range 7: 5866 to 6639 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
558.7 bits(1213) 0.0 254/258(98%) 0/258(0%) Minus/Plus
Query       51  RMRGHQVFQTSSRKTKVLPERSHKSQGARLCLREXXXXXXXXXXXXXXVNKITSRSVSGSGLIIQ*WLSNPTTPQ*RLKW*KPGPLKMPSWST*SIWL*VLREHTGRCLWLGTLPSLLLKVF*KCLIKFMNHYRASTFTSQAQISFFIQHKTACV*GTYRMYS*LRKVFLSRAKMSTR**LWATICSYVMIYWFSMMLLI*WVH*KSLDVVWWVNHLSRSNTNAIMLPQVAVRRRC*WTNLSSHPIARPPLRLMWEVL  824
                RMRGHQVFQTSS KTKVLPERSHKSQGARLCLREVVGKSRGGRRTRSGVNKITSRSVSGSGLIIQ*WLSNPTTPQ*RLKW KPGPLKMPSWST*SIWL*VLREHTGRCLWLGTLPSLLLKVF*KCLIKFMNHYRASTFTSQAQISFFIQH+TACV*GTYRMYS*LRKVFLSRAKMSTR* LWATICSYVMIYWFSMMLLI*WVH*KSLDVVWWVNHLSRSNTNAIMLPQVAVRRRC*WTNLSSHPIARPPLRLMWEVL
Subject   5866  RMRGHQVFQTSSCKTKVLPERSHKSQGARLCLREVVGKSRGGRRTRSGVNKITSRSVSGSGLIIQ*WLSNPTTPQ*RLKWLKPGPLKMPSWST*SIWL*VLREHTGRCLWLGTLPSLLLKVF*KCLIKFMNHYRASTFTSQAQISFFIQHRTACV*GTYRMYS*LRKVFLSRAKMSTR*QLWATICSYVMIYWFSMMLLI*WVH*KSLDVVWWVNHLSRSNTNAIMLPQVAVRRRC*WTNLSSHPIARPPLRLMWEVL  6639

Range 8: 5479 to 5823 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
253.1 bits(546) 0.0 112/115(97%) 0/115(0%) Minus/Plus
Query      867  FYGGGPVS*KIS*RQLSTRASLTIA*CRSTRWVEAYHSTPMMRSAIHRITPS*QSISWGRLTSQLSVGRVVRLWS*TWLRVTIFSCLAVFKGRTCIQ*ALLTKGASV*RLGRLGV  1211
                F+ GGPVS*KIS*RQLSTRASLTIA*CRSTRWVEAYHSTPMMRSAIHRITPS*QSISWGRLTSQLSVGRVV+LWS*TWLRVTIFSCLAVFKGRTCIQ*ALLTKGASV*RLGRLGV
Subject   5479  FHQGGPVS*KIS*RQLSTRASLTIA*CRSTRWVEAYHSTPMMRSAIHRITPS*QSISWGRLTSQLSVGRVVKLWS*TWLRVTIFSCLAVFKGRTCIQ*ALLTKGASV*RLGRLGV  5823

Nucleotide Sequence (1742 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
175
350
525
700
875
1050
1225
1400
1575
1742

Descriptions

Alignments

Grapevine leafroll associated virus 3 isolate 6 6 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130295.1 Length: 4711 Number of Matches: 17

Range 1: 1996 to 3735 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1175.5 bits(2559) 0.0 540/580(93%) 0/580(0%) Minus/Plus
Query        2  *SGYLRRAVFTDYGSSTDKRKATQTRSFESRESNTTRYGEHDSGHDTTFRTLLYCKEYKRQRWV*GGDRIRSKEGLLELFGSKGSYIRREIRRVSNQHCAILYEVFYSHHHYATYREENSASVHCPS*ARRPEEVHSVLLRLRTTG*QILPGGRVEG*RNGLRYSD*IS*FKA*RFGDV*HLRKHLII*RWNSDQF*LQFAVIPA*TLVV*K**LMXXXXXXXXTIVW*SHFETLTLDSPL*KSIRRIQRLY*VLINCFPRFLIRKVR**VTM*DRVSGFTTSFRKCVKISTRSARYNVPVT*KHI*ETGRLTLIYFLMS*PTTKQR*GG*LIKTIARGVGY*TI*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGFDH*HSL*DVDRNSQKFYRRLNTRRRLLCFSVGRSEIN*R*FPLKKKERQVFL*WCLWIRRCES*VYFVRGESRIRVHRFLETSLRR*RRRWKHTTALTNLISRLKHHGPIVYYRADPFRLVQ**RDSPVHLD  1741
                *SGYLR AVF D GSSTDKRK TQTRSFE RESNTTRYGE+DSGHDTTFRTLLYCKEYKRQR V*GGDRIRSKE LL+LFGSKGSYIRREIR VSNQHCAIL+EVFYSHHHY+TYREENSASV+CPS*ARRPEEVHSVLLRLRTTG*QILPGGRVEG*RNGLRYSD*IS*FKA*RFGDV*HLRKHLI+*RWNSDQF*LQFAVIPA*TLVV*K**LMTYTTT YS    *S FET TLDS L*K+IRRIQRLY*VLINCFPR LIRKVR**VTM*DRVSGFT SFRKCVKISTRSARYNVPVT*KHI*ETGR TLIYFLMS*PTTKQR*GG*LIKTIARGVGY* I*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGFDH*HSL*DVDRNSQKFYRRLNTRRRLLCFSVGRSEIN*R*FPLKKKERQV L*W LWIRRCES*VYFV GESRI V RFLE SLRR* RRWK TTALTNLIS LKHHGPIVYY ADPFRLVQ**RDS +H D
Subject   1996  *SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYCKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QILPGGRVEG*RNGLRYSD*IS*FKA*RFGDV*HLRKHLIV*RWNSDQF*LQFAVIPA*TLVV*K**LMTYTTTIYSITAR*SRFETPTLDSLL*KNIRRIQRLY*VLINCFPRSLIRKVR**VTM*DRVSGFTISFRKCVKISTRSARYNVPVT*KHI*ETGRPTLIYFLMS*PTTKQR*GG*LIKTIARGVGY*MI*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGFDH*HSL*DVDRNSQKFYRRLNTRRRLLCFSVGRSEIN*R*FPLKKKERQVLL*W*LWIRRCES*VYFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD  3735

Range 2: 1995 to 3197 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
864.8 bits(1881) 0.0 387/401(97%) 0/401(0%) Minus/Plus
Query      540  MKRISTTSGIYRLRKLYR*TQGYADSFFRKPGVKHHEIWGT**WP*YNFSYSTLL*RI*ASKMGIGWRPN*VKRRST*VIRK*GKLY*EGNTTRLQPTLCDPL*GIXXXXXXXXXXXRKFSQRTLP*LSTASRRGSLRTASTSHYWITDITRRTC*RLTQWLAL*RLNQLI*GVKVRRRITS*KAFDYLKMEFRPVLITVRRDPGVNTGSLKVIAYDLHYDNIFDNCVVKSFRDTDTGFTVMKEYSTNSAFILSPYKLFSAVFNKEGEMISNDVGSSFRVYNIFSQMCKDINEISEIQRAGYLETYLGDGQADTDIFFDVLTNNKAKVRWLVNKDHSAWCGILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*GCQSRLERTITWF*Y  1742
                MKRIST SGI R RKLYR*TQ YADSFFRK GVKHHEIWG **WP*YNFSYSTLL*RI*ASK GIGWRPN*VKR+ST*VIRK*GKLY*EGNT RLQPTLCDP *GILLTPPL YL*RRKFSQR LP*LSTASRRGSLRTASTSHYWITDITRRTC*RLTQWLAL*RLNQLI*GVKVRRRITS*KAFD LKMEFRPVLITVRRDPGVNTGSLKVIAYDLHYDNIFDNC VKSFRDTDTGFTVMKEYSTNSAFILSPYKLFSAVFNKEGEMISNDVGSSFRVYNIFSQMCKDINEISEIQRAGYLETYLGDGQADTDIFFDVLTNNKAKVRWLVNKDHSAWCGILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*GCQSRLERTITWF*Y
Subject   1995  MKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLL*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDITRRTC*RLTQWLAL*RLNQLI*GVKVRRRITS*KAFDCLKMEFRPVLITVRRDPGVNTGSLKVIAYDLHYDNIFDNCAVKSFRDTDTGFTVMKEYSTNSAFILSPYKLFSAVFNKEGEMISNDVGSSFRVYNIFSQMCKDINEISEIQRAGYLETYLGDGQADTDIFFDVLTNNKAKVRWLVNKDHSAWCGILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*GCQSRLERTITWF*Y  3197

Range 3: 1997 to 3124 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
823.6 bits(1791) 0.0 363/376(97%) 0/376(0%) Minus/Plus
Query      613  EADIYDERYLPITEALQINARLRRLVLSKAGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAMACAIAIKSANLRRKGSETYNILESI*LSKDGIQTSFNYSSP*SRRKHW*FESDSL*LTLRQHIRQLCGKVISRH*HWIHRYERVFDEFSVYTKSL*TVFRGF**GR*DDK*RCRIEFQGLQHLFANV*RYQRDQRDTTCRLPRNIFRRRAG*H*YIF*CLNQQQSKGKVVS**RP*RVVWDIERFEVGREQQGEI*GERHTRYLRFIV*LSRV*MK  1740
                EADIYDERYLPITEALQINARLRRLVLSK GSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAMACAIAIKSANLRRKGSETYNILESI*LSKDGIQTSFNYSSP*SRRKHW*FESDSL*LTLRQ+IR L GKV+SRH HWIH YER+FDEFSVYTKSL*TVFRG **GR*DDK*RCRIEFQGLQ+LFANV*RYQRDQRDTTCRL RNIFRRRAG H*YIF*CLNQQQSKGKVVS**RP*RVVWDIE FEVGREQQGEI*GERHTRYLRFIV*LSRV*MK
Subject   1997  EADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAMACAIAIKSANLRRKGSETYNILESI*LSKDGIQTSFNYSSP*SRRKHW*FESDSL*LTLRQYIR*LRGKVVSRHRHWIHCYERIFDEFSVYTKSL*TVFRGL**GR*DDK*RCRIEFQGLQYLFANV*RYQRDQRDTTCRLLRNIFRRRAGRH*YIF*CLNQQQSKGKVVS**RP*RVVWDIE*FEVGREQQGEI*GERHTRYLRFIV*LSRV*MK  3124

Range 4: 2763 to 3734 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
669.1 bits(1454) 0.0 306/324(94%) 0/324(0%) Plus/Minus
Query        3  SRCTGLSRHYCTRRKGSAR**TIGP*CFNLEMRLVSAVVCFHLLLYLRRLVSRNLCTLILDSPLTKYT*LSQRRIHKHHYKNTCLSFFLSGNYL*LISLLPTLKQXXXXXXXXXXXNFWLFLSTSYRLC**SKPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPLQIVQYPTPRAMVFIN*PPYLCFVVG*DIKKYISVSLPVS*ICF*VTGTLYLADLVDIFTHLRKDVVNPETRSYIVTYHLTFLIKNRGKQF  974
                S+C  LSRHYCTRRKGSA+**TIGP*CFN EMRLVSAVV FHLL+YLR+L SRNL T ILDSP TKYT*LSQRRIH HHY NTCLSFFLSGNYL*LISLLPTLKQRSRRRVLSLR*NFWLFLSTSYRLC**SKPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPLQI+QYPTPRAMVFIN*PPYLCFVVG*DIKKYISV LPVS*ICF*VTGTLYLADLVDIFTHLRKD+VNPETRSYIVTYHLTFLIK+RGKQF
Subject   2763  SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKYT*LSQRRIHNHHYNNTCLSFFLSGNYL*LISLLPTLKQRSRRRVLSLR*NFWLFLSTSYRLC**SKPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPLQIIQYPTPRAMVFIN*PPYLCFVVG*DIKKYISVGLPVS*ICF*VTGTLYLADLVDIFTHLRKDIVNPETRSYIVTYHLTFLIKDRGKQF  3734

Range 5: 1997 to 3022 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
661.8 bits(1438) 0.0 324/342(95%) 0/342(0%) Plus/Minus
Query      715  NIPHHALWSXXXXXXXXXXXXVKTSKNISVSACPSPKYVSR*PARCXXXXXXXXXHICEKML*TLKXXXXXXXXXXXXXXKTAENSL*GLSINAEFVEYSFITVNPVSVSRNDFTTQLSNMLS*CKS*AITFKLPVFTPGSRRTVIKTGLNSIFR*SNAF*DVIRLRTFTP*IS*FNRYSASHCVSLQHVRRVISVIQ*CEVEAVRSEPLRDAVLS*GSVRWLNFLLYK*RNGGVSKIPHKGSHSVGWRRVVFPS*YSFPYFRITQVDLLLT*FGLHPIPIFDAYILYSRVEYEKLYHGHYHVPHISWCLTPGFRKNESA*PCVYL*SFRNR*IPLVVDIRF  1740
                NIPHHALWSLLTNHLTFALLLVKTSKNISVSACPSPKYVS+*PARCISLISLISLHICEK+L*TLKLDPTSLLIISPSLLKTAENSL*GLSINAEFVEYSFITVNPVSVSRNDFT QLSN+LS*CKS*AITFKLPVFTPGSRRTVIKTGLNSIFR SNAF*DVIRLRTFTP*IS*FNRYSASHCVSLQHVRRVISVIQ*CEVEAVRSEPLRDAVLS*GS+RWLNFLLYK* NGGVSKIPH+GSHSVGWRR+VFPS*YSFPYFRIT VD LLT*FGLHPIP+FDAYILYSRVEYEKLYHGHYH+PHISWCLTP FRKNESA* CVYL*SFR R IPL+VDIRF
Subject   1997  NIPHHALWSLLTNHLTFALLLVKTSKNISVSACPSPKYVSK*PARCISLISLISLHICEKIL*TLKLDPTSLLIISPSLLKTAENSL*GLSINAEFVEYSFITVNPVSVSRNDFTAQLSNILS*CKS*AITFKLPVFTPGSRRTVIKTGLNSIFRQSNAF*DVIRLRTFTP*IS*FNRYSASHCVSLQHVRRVISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYSRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRF  3022

Range 6: 3173 to 3736 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
412.1 bits(893) 0.0 179/188(95%) 0/188(0%) Minus/Plus
Query        1  TNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKALITNTVCKMSIETARSFIGDLILVADSSVSALEEAKSIRDNFRLRKRRGKYFYSGVCGSDVAKVRYILSGENRGLGYTDSLKLACVGREGGGNILQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILI  564
                TNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKALITNTVCKMSIETARSFIGDLILVADSSVSALEEAKSI+DNFRLRKRRGKY+YSG CGSDVAKV+YILSGENRGLG  DSLKL CVGR+GGGN+LQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILI
Subject   3173  TNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKALITNTVCKMSIETARSFIGDLILVADSSVSALEEAKSIKDNFRLRKRRGKYYYSGDCGSDVAKVKYILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILI  3736

Range 7: 3237 to 3728 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
321.8 bits(696) 0.0 149/164(91%) 0/164(0%) Minus/Plus
Query        9  SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL*SLTQSVRCR*KQPEVLSET*YSSPTPLFQRWKKRNQLEIISA*EKGEASIFIVVFVDPTLRKLGIFCQGRIED*GTQIP*N*PA*VEKEVETYYSTY*SHL*VKASWTYRLLSCRSFPPCTIMT*QPCT  500
                SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL*SLTQSVRCR*KQPEVLSET*YSSPTPLFQRWKKRNQL+IISA*EKGEASI IVV VDPTLRKL IFC GRIED G  IP*+* A*V+KEVETYYSTY*SHL VKASWTYRLL CRSFPPCTIMT*Q  T
Subject   3237  SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL*SLTQSVRCR*KQPEVLSET*YSSPTPLFQRWKKRNQLKIISA*EKGEASIIIVVIVDPTLRKLSIFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFT  3728

Range 8: 3083 to 3418 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
256.7 bits(554) 0.0 112/112(100%) 0/112(0%) Plus/Minus
Query      319  GVGDEY*VSDKTSGCFYRHLTDCVSDQSLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QP*DKIAERKQLHLNPG*SDDKT*V  654
                GVGDEY*VSDKTSGCFYRHLTDCVSDQSLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QP*DKIAERKQLHLNPG*SDDKT*V
Subject   3083  GVGDEY*VSDKTSGCFYRHLTDCVSDQSLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QP*DKIAERKQLHLNPG*SDDKT*V  3418

Range 9: 1996 to 2313 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
227.0 bits(489) 0.0 103/106(97%) 0/106(0%) Plus/Minus
Query     1424  KYLIKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIMFPISRGV*LPAFERTSLRSLAFICRASVIGKYRSS*ISAS  1741
                KYL+KDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATI+FPISRGV*LP FERTSLRSLAFICRASVIGKYRSS*ISAS
Subject   1996  KYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISAS  2313

Range 10: 2424 to 2723 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
203.6 bits(438) 0.0 91/100(91%) 0/100(0%) Plus/Minus
Query     1014  FHNGESSVSVSK*LYHTIVEYXXXXXXISYHFQTTSVYAGITANCN*NWSEFHL*IIKCFLRCYTSPNLYALN*LI*SL*RKPLR*PSTRPPGNICYPVV  1313
                FHN ESSV VSK LY  ++EY+VVV*VISYHFQTTSVYAGITANCN*NWSEFHL* IKCFLRCYTSPNLYALN*LI*SL*RKPLR*PSTRPPGNICYPVV
Subject   2424  FHNSESSVGVSKRLYRAVIEYIVVV*VISYHFQTTSVYAGITANCN*NWSEFHL*TIKCFLRCYTSPNLYALN*LI*SL*RKPLR*PSTRPPGNICYPVV  2723

Range 11: 3499 to 3735 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
172.4 bits(370) 0.0 71/79(90%) 0/79(0%) Plus/Minus
Query        2  IKMYRAVTSLLYKAERICTIINDRSMML*PRDEISKCCSMFPPPSLPTQASFKESVYPNPRFSPDKIYLTFATSDPQTP  238
                IKM  AVTSLLYKAERICTIINDRSMML*PRDEISKCCS FPPP LPTQ SFKES +PNPRFSPDKIYLTFATSDPQ+P
Subject   3499  IKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKIYLTFATSDPQSP  3735

Range 12: 2356 to 2952 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
390.5 bits(846) 0.0 187/199(94%) 0/199(0%) Plus/Minus
Query      785  HQKIYQCQPARLLNMFLGNRHVVSR*SR*YLYTFAKRCCKP*NSILHRYLSSHLPY*KPRKTVYKDLV*TLNSSNTLS*R*IQCQCLEMTLPHNCRICCRSVSHKLSLSNYQCLRRDHGEL*LKLV*IPSLDNQMLSKMLYVSEPLRLKXXXXXXXXXXXXXXFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG  1381
                HQKIYQC+PARLLNMFL NRHVVSR*SR*YLYTFAKR CKP*NSILHRYLSSHLPY*+PRKTVYKDLV*TLNSSN LS*+*IQC+CLE TLP + RI CRSVSHKLSLSNYQCLRRDHGEL*LKLV*IPSLDNQMLSKMLYVSEPLRLKLADLIAIAQAIALAFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG
Subject   2356  HQKIYQCRPARLLNMFLSNRHVVSR*SR*YLYTFAKRYCKP*NSILHRYLSSHLPY*RPRKTVYKDLV*TLNSSNILS*Q*IQCRCLETTLPRSYRIYCRSVSHKLSLSNYQCLRRDHGEL*LKLV*IPSLDNQMLSKMLYVSEPLRLKLADLIAIAQAIALAFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG  2952

Range 13: 3455 to 3736 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
160.1 bits(343) 0.0 78/94(83%) 0/94(0%) Plus/Minus
Query        1  DQDVQGCHVIIVQGGKDLHDNKR*VHDALT*R*D**VL*YVSTSFSTYAG*FQGICVP*SSILP*QNIPNFRNVGSTNTTIKILASPFS*AEII  282
                +Q+V+ CHVIIVQGGKDLH+NKR*VHDALT R*D**VL*YVSTS STYA * QGI  P SSILP QNI NFRNVGST TTI ILASPFS*AEII
Subject   3455  NQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNILNFRNVGSTITTIIILASPFS*AEII  3736

Range 14: 1995 to 2213 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
153.2 bits(328) 0.0 67/73(92%) 0/73(0%) Plus/Minus
Query     1524  FDLIRSPPYTHL*RLYSLQ*SRVRKVVSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH  1742
                FDLIRSPPYT L*RLYSLQ*SRVRKVVSWPLS SPYLVVFDSRLSKERVCV LRLSVELP S NTA RRYPLH
Subject   1995  FDLIRSPPYTRL*RLYSLQ*SRVRKVVSWPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH  2213

Range 15: 3226 to 3450 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
133.9 bits(286) 0.0 75/75(100%) 0/75(0%) Plus/Minus
Query      287  IDFXXXXXXXXXXXXXIKSPIKLLAVSIDILQTVLVIKAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL  511
                IDFASSNAETEESATSIKSPIKLLAVSIDILQTVLVIKAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL
Subject   3226  IDFASSNAETEESATSIKSPIKLLAVSIDILQTVLVIKAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL  3450

Range 16: 3013 to 3174 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.4 bits(263) 0.0 53/54(98%) 0/54(0%) Plus/Minus
Query      563  VLSDFDNLKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSNRSISH  724
                VLSDFDNLKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSN SISH
Subject   3013  VLSDFDNLKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSNHSISH  3174

Range 17: 2274 to 2381 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.0 bits(164) 0.0 34/36(94%) 0/36(0%) Plus/Minus
Query     1356  A*LGQCTLAEFSSL*VA*WWCE*NTS*RIAQCWLET  1463
                A*LGQ TLAEFSSL*V *WWCE*NTS*RIAQCWLET
Subject   2274  A*LGQYTLAEFSSL*VE*WWCE*NTS*RIAQCWLET  2381

Grapevine leafroll associated virus 3 isolate 6 18 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130300.1 Length: 4711 Number of Matches: 17

Range 1: 1996 to 3735 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1175.5 bits(2559) 0.0 541/580(93%) 0/580(0%) Minus/Plus
Query        2  *SGYLRRAVFTDYGSSTDKRKATQTRSFESRESNTTRYGEHDSGHDTTFRTLLYCKEYKRQRWV*GGDRIRSKEGLLELFGSKGSYIRREIRRVSNQHCAILYEVFYSHHHYATYREENSASVHCPS*ARRPEEVHSVLLRLRTTG*QILPGGRVEG*RNGLRYSD*IS*FKA*RFGDV*HLRKHLII*RWNSDQF*LQFAVIPA*TLVV*K**LMXXXXXXXXTIVW*SHFETLTLDSPL*KSIRRIQRLY*VLINCFPRFLIRKVR**VTM*DRVSGFTTSFRKCVKISTRSARYNVPVT*KHI*ETGRLTLIYFLMS*PTTKQR*GG*LIKTIARGVGY*TI*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGFDH*HSL*DVDRNSQKFYRRLNTRRRLLCFSVGRSEIN*R*FPLKKKERQVFL*WCLWIRRCES*VYFVRGESRIRVHRFLETSLRR*RRRWKHTTALTNLISRLKHHGPIVYYRADPFRLVQ**RDSPVHLD  1741
                *SGYLR AVF D GSSTDKRK TQTRSFE RESNTTRYGE+DSGHDTTFRTLLYCKEYKRQR V*GGDRIRSKE LL+LFGSKGSYIRREIR VSNQHCAIL+EVFYSHHHY+TYREENSASV+CPS*ARRPEEVHSVLLRLRTTG*QILPGGRVEG*RNGLRYSD*IS*FKA*RFGDV*HLRKHLII*RWNSDQF*LQFAVIPA*TLVV*K**LMTYTTT YS    *S FET TLDS L*K+IRRIQRLY*VLINCFPR LIRKVR**VTM*DRVSGFT SFRKCVKISTRSARYNVPVT*KHI*ETGRLTLIYFLMS*PTTKQR*GG*LIKTIARGVGY* I*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGFDH*HSL*DVDRNSQKFYRRLNTR RLLCFSVGRSEIN*R*FPLKKKERQV L*W LWIRRCES*VYFV GESRI V RFLE SLRR* RRWK TTALTNLIS LKHHGPIVYY ADPFRLVQ**RDS +H D
Subject   1996  *SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYCKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QILPGGRVEG*RNGLRYSD*IS*FKA*RFGDV*HLRKHLII*RWNSDQF*LQFAVIPA*TLVV*K**LMTYTTTIYSITAR*SRFETPTLDSLL*KNIRRIQRLY*VLINCFPRSLIRKVR**VTM*DRVSGFTISFRKCVKISTRSARYNVPVT*KHI*ETGRLTLIYFLMS*PTTKQR*GG*LIKTIARGVGY*MI*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGFDH*HSL*DVDRNSQKFYRRLNTRCRLLCFSVGRSEIN*R*FPLKKKERQVLL*W*LWIRRCES*VYFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD  3735

Range 2: 1995 to 3197 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
865.2 bits(1882) 0.0 387/401(97%) 0/401(0%) Minus/Plus
Query      540  MKRISTTSGIYRLRKLYR*TQGYADSFFRKPGVKHHEIWGT**WP*YNFSYSTLL*RI*ASKMGIGWRPN*VKRRST*VIRK*GKLY*EGNTTRLQPTLCDPL*GIXXXXXXXXXXXRKFSQRTLP*LSTASRRGSLRTASTSHYWITDITRRTC*RLTQWLAL*RLNQLI*GVKVRRRITS*KAFDYLKMEFRPVLITVRRDPGVNTGSLKVIAYDLHYDNIFDNCVVKSFRDTDTGFTVMKEYSTNSAFILSPYKLFSAVFNKEGEMISNDVGSSFRVYNIFSQMCKDINEISEIQRAGYLETYLGDGQADTDIFFDVLTNNKAKVRWLVNKDHSAWCGILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*GCQSRLERTITWF*Y  1742
                MKRIST SGI R RKLYR*TQ YADSFFRK GVKHHEIWG **WP*YNFSYSTLL*RI*ASK GIGWRPN*VKR+ST*VIRK*GKLY*EGNT RLQPTLCDP *GILLTPPL YL*RRKFSQR LP*LSTASRRGSLRTASTSHYWITDITRRTC*RLTQWLAL*RLNQLI*GVKVRRRITS*KAFDYLKMEFRPVLITVRRD GVNTGSLKVIAYDLHYDNIFDNC VKSFRDTDTGFTVMKEYSTNSAFILSPYKLFSAVFNKEGEMISNDVGSSFRVYNIFSQMCKDINEISEIQRAGYLETYLGDGQADTDIFFDVLTNNKAKVRWLVNKDHSAWCGILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*GCQSRLERTITWF*Y
Subject   1995  MKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLL*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDITRRTC*RLTQWLAL*RLNQLI*GVKVRRRITS*KAFDYLKMEFRPVLITVRRDTGVNTGSLKVIAYDLHYDNIFDNCAVKSFRDTDTGFTVMKEYSTNSAFILSPYKLFSAVFNKEGEMISNDVGSSFRVYNIFSQMCKDINEISEIQRAGYLETYLGDGQADTDIFFDVLTNNKAKVRWLVNKDHSAWCGILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*GCQSRLERTITWF*Y  3197

Range 3: 1997 to 3124 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
827.7 bits(1800) 0.0 364/376(97%) 0/376(0%) Minus/Plus
Query      613  EADIYDERYLPITEALQINARLRRLVLSKAGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAMACAIAIKSANLRRKGSETYNILESI*LSKDGIQTSFNYSSP*SRRKHW*FESDSL*LTLRQHIRQLCGKVISRH*HWIHRYERVFDEFSVYTKSL*TVFRGF**GR*DDK*RCRIEFQGLQHLFANV*RYQRDQRDTTCRLPRNIFRRRAG*H*YIF*CLNQQQSKGKVVS**RP*RVVWDIERFEVGREQQGEI*GERHTRYLRFIV*LSRV*MK  1740
                EADIYDERYLPITEALQINARLRRLVLSK GSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAMACAIAIKSANLRRKGSETYNILESI*LSKDGIQTSFNYSSP* RRKHW*FESDSL*LTLRQ+IR L GKV+SRH HWIH YER+FDEFSVYTKSL*TVFRG **GR*DDK*RCRIEFQGLQ+LFANV*RYQRDQRDTTCRLPRNIFRRRAG*H*YIF*CLNQQQSKGKVVS**RP*RVVWDIE FEVGREQQGEI*GERHTRYLRFIV*LSRV*MK
Subject   1997  EADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAMACAIAIKSANLRRKGSETYNILESI*LSKDGIQTSFNYSSP*YRRKHW*FESDSL*LTLRQYIR*LRGKVVSRHRHWIHCYERIFDEFSVYTKSL*TVFRGL**GR*DDK*RCRIEFQGLQYLFANV*RYQRDQRDTTCRLPRNIFRRRAG*H*YIF*CLNQQQSKGKVVS**RP*RVVWDIE*FEVGREQQGEI*GERHTRYLRFIV*LSRV*MK  3124

Range 4: 2763 to 3734 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
671.0 bits(1458) 0.0 306/324(94%) 0/324(0%) Plus/Minus
Query        3  SRCTGLSRHYCTRRKGSAR**TIGP*CFNLEMRLVSAVVCFHLLLYLRRLVSRNLCTLILDSPLTKYT*LSQRRIHKHHYKNTCLSFFLSGNYL*LISLLPTLKQXXXXXXXXXXXNFWLFLSTSYRLC**SKPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPLQIVQYPTPRAMVFIN*PPYLCFVVG*DIKKYISVSLPVS*ICF*VTGTLYLADLVDIFTHLRKDVVNPETRSYIVTYHLTFLIKNRGKQF  974
                S+C  LSRHYCTRRKGSA+**TIGP*CFN EMRLVSAVV FHLL+YLR+L SRNL T ILDSP TKYT*LSQRRIH HHY NTCLSFFLSGNYL*LISLLPTLKQRSR+RVLSLR*NFWLFLSTSYRLC**SKPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPLQI+QYPTPRAMVFIN*PPYLCFVVG*DIKKYISVSLPVS*ICF*VTGTLYLADLVDIFTHLRKD+VNPETRSYIVTYHLTFLIK+RGKQF
Subject   2763  SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKYT*LSQRRIHNHHYNNTCLSFFLSGNYL*LISLLPTLKQRSRQRVLSLR*NFWLFLSTSYRLC**SKPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPLQIIQYPTPRAMVFIN*PPYLCFVVG*DIKKYISVSLPVS*ICF*VTGTLYLADLVDIFTHLRKDIVNPETRSYIVTYHLTFLIKDRGKQF  3734

Range 5: 1997 to 3022 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
661.3 bits(1437) 0.0 325/342(95%) 0/342(0%) Plus/Minus
Query      715  NIPHHALWSXXXXXXXXXXXXVKTSKNISVSACPSPKYVSR*PARCXXXXXXXXXHICEKML*TLKXXXXXXXXXXXXXXKTAENSL*GLSINAEFVEYSFITVNPVSVSRNDFTTQLSNMLS*CKS*AITFKLPVFTPGSRRTVIKTGLNSIFR*SNAF*DVIRLRTFTP*IS*FNRYSASHCVSLQHVRRVISVIQ*CEVEAVRSEPLRDAVLS*GSVRWLNFLLYK*RNGGVSKIPHKGSHSVGWRRVVFPS*YSFPYFRITQVDLLLT*FGLHPIPIFDAYILYSRVEYEKLYHGHYHVPHISWCLTPGFRKNESA*PCVYL*SFRNR*IPLVVDIRF  1740
                NIPHHALWSLLTNHLTFALLLVKTSKNISVSACPSPKYVSR*PARCISLISLISLHICEK+L*TLKLDPTSLLIISPSLLKTAENSL*GLSINAEFVEYSFITVNPVSVSRNDFT QLSN+LS*CKS*AITFKLPVFTP SRRTVIKTGLNSIFR*SNAF*DVIRLRTFTP*IS*FNRYSASHCVSLQHVRRVISVIQ*CEVEAVRSEPLRDAVLS*GS+RWLNFLLYK* NGGVSKIPH+GSHSVGWRR+VFPS*YSFPYFRIT VD LLT*FGLHPIP+FDAYILYSRVEYEKLYHGHYH+PHISWCLTP FRKNESA* CVYL*SFR R IPL+VDIRF
Subject   1997  NIPHHALWSLLTNHLTFALLLVKTSKNISVSACPSPKYVSR*PARCISLISLISLHICEKIL*TLKLDPTSLLIISPSLLKTAENSL*GLSINAEFVEYSFITVNPVSVSRNDFTAQLSNILS*CKS*AITFKLPVFTPVSRRTVIKTGLNSIFR*SNAF*DVIRLRTFTP*IS*FNRYSASHCVSLQHVRRVISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYSRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRF  3022

Range 6: 3173 to 3736 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
412.1 bits(893) 0.0 179/188(95%) 0/188(0%) Minus/Plus
Query        1  TNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKALITNTVCKMSIETARSFIGDLILVADSSVSALEEAKSIRDNFRLRKRRGKYFYSGVCGSDVAKVRYILSGENRGLGYTDSLKLACVGREGGGNILQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILI  564
                TNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKALITNTVCKMSIETARSFIGDLILVADSSVSALEEAKSI+DNFRLRKRRGKY+YSG CGSDVAKV+YILSGENRGLG  DSLKL CVGR+GGGN+LQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILI
Subject   3173  TNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKALITNTVCKMSIETARSFIGDLILVADSSVSALEEAKSIKDNFRLRKRRGKYYYSGDCGSDVAKVKYILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILI  3736

Range 7: 3237 to 3728 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
319.1 bits(690) 0.0 148/164(90%) 0/164(0%) Minus/Plus
Query        9  SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL*SLTQSVRCR*KQPEVLSET*YSSPTPLFQRWKKRNQLEIISA*EKGEASIFIVVFVDPTLRKLGIFCQGRIED*GTQIP*N*PA*VEKEVETYYSTY*SHL*VKASWTYRLLSCRSFPPCTIMT*QPCT  500
                SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL*SLTQSVRCR*KQPEVLSET*YS PTPLFQRWKKRNQL+IISA*EKGEASI IVV VDPTLRKL IFC GRIED G  IP*+* A*V+KEVETYYSTY*SHL VKASWTYRLL CRSFPPCTIMT*Q  T
Subject   3237  SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL*SLTQSVRCR*KQPEVLSET*YSLPTPLFQRWKKRNQLKIISA*EKGEASIIIVVIVDPTLRKLSIFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFT  3728

Range 8: 3083 to 3418 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
254.5 bits(549) 0.0 111/112(99%) 0/112(0%) Plus/Minus
Query      319  GVGDEY*VSDKTSGCFYRHLTDCVSDQSLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QP*DKIAERKQLHLNPG*SDDKT*V  654
                GVG+EY*VSDKTSGCFYRHLTDCVSDQSLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QP*DKIAERKQLHLNPG*SDDKT*V
Subject   3083  GVGNEY*VSDKTSGCFYRHLTDCVSDQSLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QP*DKIAERKQLHLNPG*SDDKT*V  3418

Range 9: 1996 to 2313 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
227.0 bits(489) 0.0 103/106(97%) 0/106(0%) Plus/Minus
Query     1424  KYLIKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIMFPISRGV*LPAFERTSLRSLAFICRASVIGKYRSS*ISAS  1741
                KYL+KDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATI+FPISRGV*LP FERTSLRSLAFICRASVIGKYRSS*ISAS
Subject   1996  KYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISAS  2313

Range 10: 2424 to 2723 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
205.9 bits(443) 0.0 92/100(92%) 0/100(0%) Plus/Minus
Query     1014  FHNGESSVSVSK*LYHTIVEYXXXXXXISYHFQTTSVYAGITANCN*NWSEFHL*IIKCFLRCYTSPNLYALN*LI*SL*RKPLR*PSTRPPGNICYPVV  1313
                FHN ESSV VSK LY  ++EY+VVV*VISYHFQTTSVYAGITANCN*NWSEFHL*IIKCFLRCYTSPNLYALN*LI*SL*RKPLR*PSTRPPGNICYPVV
Subject   2424  FHNSESSVGVSKRLYRAVIEYIVVV*VISYHFQTTSVYAGITANCN*NWSEFHL*IIKCFLRCYTSPNLYALN*LI*SL*RKPLR*PSTRPPGNICYPVV  2723

Range 11: 3499 to 3735 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
172.4 bits(370) 0.0 71/79(90%) 0/79(0%) Plus/Minus
Query        2  IKMYRAVTSLLYKAERICTIINDRSMML*PRDEISKCCSMFPPPSLPTQASFKESVYPNPRFSPDKIYLTFATSDPQTP  238
                IKM  AVTSLLYKAERICTIINDRSMML*PRDEISKCCS FPPP LPTQ SFKES +PNPRFSPDKIYLTFATSDPQ+P
Subject   3499  IKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKIYLTFATSDPQSP  3735

Range 12: 2356 to 2952 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
391.0 bits(847) 0.0 188/199(94%) 0/199(0%) Plus/Minus
Query      785  HQKIYQCQPARLLNMFLGNRHVVSR*SR*YLYTFAKRCCKP*NSILHRYLSSHLPY*KPRKTVYKDLV*TLNSSNTLS*R*IQCQCLEMTLPHNCRICCRSVSHKLSLSNYQCLRRDHGEL*LKLV*IPSLDNQMLSKMLYVSEPLRLKXXXXXXXXXXXXXXFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG  1381
                HQKIYQCQPARLLNMFLGNRHVVSR*SR*YLYTFAKR CKP*NSILHRYLSSHLPY*+PRKTVYKDLV*TLNSSN LS*+*IQC+CLE TLP + RI CRSVSHKLSLSNYQCLRR HGEL*LKLV*IPSLDNQMLSKMLYVSEPLRLKLADLIAIAQAIALAFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG
Subject   2356  HQKIYQCQPARLLNMFLGNRHVVSR*SR*YLYTFAKRYCKP*NSILHRYLSSHLPY*RPRKTVYKDLV*TLNSSNILS*Q*IQCRCLETTLPRSYRIYCRSVSHKLSLSNYQCLRRYHGEL*LKLV*IPSLDNQMLSKMLYVSEPLRLKLADLIAIAQAIALAFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG  2952

Range 13: 3455 to 3736 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
160.1 bits(343) 0.0 78/94(83%) 0/94(0%) Plus/Minus
Query        1  DQDVQGCHVIIVQGGKDLHDNKR*VHDALT*R*D**VL*YVSTSFSTYAG*FQGICVP*SSILP*QNIPNFRNVGSTNTTIKILASPFS*AEII  282
                +Q+V+ CHVIIVQGGKDLH+NKR*VHDALT R*D**VL*YVSTS STYA * QGI  P SSILP QNI NFRNVGST TTI ILASPFS*AEII
Subject   3455  NQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNILNFRNVGSTITTIIILASPFS*AEII  3736

Range 14: 1995 to 2213 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
153.2 bits(328) 0.0 67/73(92%) 0/73(0%) Plus/Minus
Query     1524  FDLIRSPPYTHL*RLYSLQ*SRVRKVVSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH  1742
                FDLIRSPPYT L*RLYSLQ*SRVRKVVSWPLS SPYLVVFDSRLSKERVCV LRLSVELP S NTA RRYPLH
Subject   1995  FDLIRSPPYTRL*RLYSLQ*SRVRKVVSWPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH  2213

Range 15: 3226 to 3450 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
133.9 bits(286) 0.0 75/75(100%) 0/75(0%) Plus/Minus
Query      287  IDFXXXXXXXXXXXXXIKSPIKLLAVSIDILQTVLVIKAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL  511
                IDFASSNAETEESATSIKSPIKLLAVSIDILQTVLVIKAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL
Subject   3226  IDFASSNAETEESATSIKSPIKLLAVSIDILQTVLVIKAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL  3450

Range 16: 3013 to 3174 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.4 bits(263) 0.0 53/54(98%) 0/54(0%) Plus/Minus
Query      563  VLSDFDNLKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSNRSISH  724
                VLSDFDNLKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSN SISH
Subject   3013  VLSDFDNLKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSNHSISH  3174

Range 17: 2274 to 2381 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.0 bits(164) 0.0 34/36(94%) 0/36(0%) Plus/Minus
Query     1356  A*LGQCTLAEFSSL*VA*WWCE*NTS*RIAQCWLET  1463
                A*LGQ TLAEFSSL*V *WWCE*NTS*RIAQCWLET
Subject   2274  A*LGQYTLAEFSSL*VE*WWCE*NTS*RIAQCWLET  2381

Grapevine leafroll associated virus 3 isolate 8 6 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130315.1 Length: 4711 Number of Matches: 17

Range 1: 1996 to 3735 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1175.5 bits(2559) 0.0 541/580(93%) 0/580(0%) Minus/Plus
Query        2  *SGYLRRAVFTDYGSSTDKRKATQTRSFESRESNTTRYGEHDSGHDTTFRTLLYCKEYKRQRWV*GGDRIRSKEGLLELFGSKGSYIRREIRRVSNQHCAILYEVFYSHHHYATYREENSASVHCPS*ARRPEEVHSVLLRLRTTG*QILPGGRVEG*RNGLRYSD*IS*FKA*RFGDV*HLRKHLII*RWNSDQF*LQFAVIPA*TLVV*K**LMXXXXXXXXTIVW*SHFETLTLDSPL*KSIRRIQRLY*VLINCFPRFLIRKVR**VTM*DRVSGFTTSFRKCVKISTRSARYNVPVT*KHI*ETGRLTLIYFLMS*PTTKQR*GG*LIKTIARGVGY*TI*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGFDH*HSL*DVDRNSQKFYRRLNTRRRLLCFSVGRSEIN*R*FPLKKKERQVFL*WCLWIRRCES*VYFVRGESRIRVHRFLETSLRR*RRRWKHTTALTNLISRLKHHGPIVYYRADPFRLVQ**RDSPVHLD  1741
                *SGYLR AVF D GSSTDKRK TQTRSFE RESNTTRYGE+DSGHDTTFRTLLYCKEYKRQR V*GGDRIRSKE LL+LFGSKGSYIRREIR VSNQHCAIL+EVFYSHHHY TYREENSASV+CPS*ARRPEEVHSVLLRLRTTG*QILPGGRVEG*RNGLRYSD*IS FKA*RFGDV*HLRKHLII*RWNSDQF*LQFAVIPA*TLVV*K**LMTYTTT YS    *S FET TLDS L*K+IRRIQRLY*VLINCFPR LIRKVR**VTM*DRVSGFT SFRKCVKISTRSARYNVPVT*KHI*ETGRLTLIYFLMS*PTTKQR*GG*LIKTIARGVGY* I*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGFDH*HSL*DVDRNSQKFYRRLNTRRRLLCFSVGRSEIN*R*FPLKKKERQV L*W LWIRRCES*VYFV GESRI V RFLE SLRR* RRWK TTALTNLIS LKHHGPIVYY ADPFRLVQ**RDS +H D
Subject   1996  *SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYCKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYFTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QILPGGRVEG*RNGLRYSD*ISQFKA*RFGDV*HLRKHLII*RWNSDQF*LQFAVIPA*TLVV*K**LMTYTTTIYSITAR*SRFETPTLDSLL*KNIRRIQRLY*VLINCFPRSLIRKVR**VTM*DRVSGFTISFRKCVKISTRSARYNVPVT*KHI*ETGRLTLIYFLMS*PTTKQR*GG*LIKTIARGVGY*MI*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGFDH*HSL*DVDRNSQKFYRRLNTRRRLLCFSVGRSEIN*R*FPLKKKERQVLL*W*LWIRRCES*VYFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD  3735

Range 2: 1995 to 3197 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
865.7 bits(1883) 0.0 387/401(97%) 0/401(0%) Minus/Plus
Query      540  MKRISTTSGIYRLRKLYR*TQGYADSFFRKPGVKHHEIWGT**WP*YNFSYSTLL*RI*ASKMGIGWRPN*VKRRST*VIRK*GKLY*EGNTTRLQPTLCDPL*GIXXXXXXXXXXXRKFSQRTLP*LSTASRRGSLRTASTSHYWITDITRRTC*RLTQWLAL*RLNQLI*GVKVRRRITS*KAFDYLKMEFRPVLITVRRDPGVNTGSLKVIAYDLHYDNIFDNCVVKSFRDTDTGFTVMKEYSTNSAFILSPYKLFSAVFNKEGEMISNDVGSSFRVYNIFSQMCKDINEISEIQRAGYLETYLGDGQADTDIFFDVLTNNKAKVRWLVNKDHSAWCGILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*GCQSRLERTITWF*Y  1742
                MKRIST SGI R RKLYR*TQ YADSFFRK GVKHHEIWG **WP*YNFSYSTLL*RI*ASK GIGWRPN*VKR+ST*VIRK*GKLY*EGNT RLQPTLCDP *GILLTPPL YL*RRKFSQR LP*LSTASRRGSLRTASTSHYWITDITRRTC*RLTQWLAL*RLNQ I*GVKVRRRITS*KAFDYLKMEFRPVLITVRRDPGVNTGSLKVIAYDLHYDNIFDNC VKSFRDTDTGFTVMKEYSTNSAFILSPYKLFSAVFNKEGEMISNDVGSSFRVYNIFSQMCKDINEISEIQRAGYLETYLGDGQADTDIFFDVLTNNKAKVRWLVNKDHSAWCGILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*GCQSRLERTITWF*Y
Subject   1995  MKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLL*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDITRRTC*RLTQWLAL*RLNQPI*GVKVRRRITS*KAFDYLKMEFRPVLITVRRDPGVNTGSLKVIAYDLHYDNIFDNCAVKSFRDTDTGFTVMKEYSTNSAFILSPYKLFSAVFNKEGEMISNDVGSSFRVYNIFSQMCKDINEISEIQRAGYLETYLGDGQADTDIFFDVLTNNKAKVRWLVNKDHSAWCGILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*GCQSRLERTITWF*Y  3197

Range 3: 1997 to 3124 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
830.4 bits(1806) 0.0 365/376(97%) 0/376(0%) Minus/Plus
Query      613  EADIYDERYLPITEALQINARLRRLVLSKAGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAMACAIAIKSANLRRKGSETYNILESI*LSKDGIQTSFNYSSP*SRRKHW*FESDSL*LTLRQHIRQLCGKVISRH*HWIHRYERVFDEFSVYTKSL*TVFRGF**GR*DDK*RCRIEFQGLQHLFANV*RYQRDQRDTTCRLPRNIFRRRAG*H*YIF*CLNQQQSKGKVVS**RP*RVVWDIERFEVGREQQGEI*GERHTRYLRFIV*LSRV*MK  1740
                EADIYDERYLPITEALQINARLRRLVLSK GSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAMACAIAIKSANLRRKGSETYNILESI*LSKDGIQTSFNYSSP*SRRKHW*FESDSL*LTLRQ+IR L GKV+SRH HWIH YER+FDEFSVYTKSL*TVFRG **GR*DDK*RCRIEFQGLQ+LFANV*RYQRDQRDTTCRLPRNIFRRRAG*H*YIF*CLNQQQSKGKVVS**RP*RVVWDIE FEVGREQQGEI*GERHTRYLRFIV*LSRV*MK
Subject   1997  EADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAMACAIAIKSANLRRKGSETYNILESI*LSKDGIQTSFNYSSP*SRRKHW*FESDSL*LTLRQYIR*LRGKVVSRHRHWIHCYERIFDEFSVYTKSL*TVFRGL**GR*DDK*RCRIEFQGLQYLFANV*RYQRDQRDTTCRLPRNIFRRRAG*H*YIF*CLNQQQSKGKVVS**RP*RVVWDIE*FEVGREQQGEI*GERHTRYLRFIV*LSRV*MK  3124

Range 4: 2763 to 3734 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
671.0 bits(1458) 0.0 307/324(95%) 0/324(0%) Plus/Minus
Query        3  SRCTGLSRHYCTRRKGSAR**TIGP*CFNLEMRLVSAVVCFHLLLYLRRLVSRNLCTLILDSPLTKYT*LSQRRIHKHHYKNTCLSFFLSGNYL*LISLLPTLKQXXXXXXXXXXXNFWLFLSTSYRLC**SKPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPLQIVQYPTPRAMVFIN*PPYLCFVVG*DIKKYISVSLPVS*ICF*VTGTLYLADLVDIFTHLRKDVVNPETRSYIVTYHLTFLIKNRGKQF  974
                S+C  LSRHYCTRRKGSA+**TIGP*CFN EMRLVSAVV FHLL+YLR+L SRNL T ILDSP TKYT*LSQRRIH HHY NTCLSFFLSGNYL*LISLLPTLKQRSRRRVLSLR*NFWLFLSTSYRLC**SKPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPLQI+QYPTPRAMVFIN*PPYLCFVVG*DIKKYISVSLPVS*ICF*VTGTLYLADLVDIFTHLRKD+VNPETRSYIVTYHLTFLIK+RGKQF
Subject   2763  SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKYT*LSQRRIHNHHYNNTCLSFFLSGNYL*LISLLPTLKQRSRRRVLSLR*NFWLFLSTSYRLC**SKPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPLQIIQYPTPRAMVFIN*PPYLCFVVG*DIKKYISVSLPVS*ICF*VTGTLYLADLVDIFTHLRKDIVNPETRSYIVTYHLTFLIKDRGKQF  3734

Range 5: 1997 to 3022 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
663.6 bits(1442) 0.0 325/342(95%) 0/342(0%) Plus/Minus
Query      715  NIPHHALWSXXXXXXXXXXXXVKTSKNISVSACPSPKYVSR*PARCXXXXXXXXXHICEKML*TLKXXXXXXXXXXXXXXKTAENSL*GLSINAEFVEYSFITVNPVSVSRNDFTTQLSNMLS*CKS*AITFKLPVFTPGSRRTVIKTGLNSIFR*SNAF*DVIRLRTFTP*IS*FNRYSASHCVSLQHVRRVISVIQ*CEVEAVRSEPLRDAVLS*GSVRWLNFLLYK*RNGGVSKIPHKGSHSVGWRRVVFPS*YSFPYFRITQVDLLLT*FGLHPIPIFDAYILYSRVEYEKLYHGHYHVPHISWCLTPGFRKNESA*PCVYL*SFRNR*IPLVVDIRF  1740
                NIPHHALWSLLTNHLTFALLLVKTSKNISVSACPSPKYVSR*PARCISLISLISLHICEK+L*TLKLDPTSLLIISPSLLKTAENSL*GLSINAEFVEYSFITVNPVSVSRNDFT QLSN+LS*CKS*AITFKLPVFTPGSRRTVIKTGLNSIFR*SNAF*DVIRLRTFTP*I *FNRYSASHCVSLQHVRRVISVIQ*CEVEAVRSEPLRDAVLS*GS+RWLNFLLYK* NGGVSKIPH+GSHSVGWRR+VFPS*YSFPYFRIT VD LLT*FGLHPIP+FDAYILYSRVEYEKLYHGHYH+PHISWCLTP FRKNESA* CVYL*SFR R IPL+VDIRF
Subject   1997  NIPHHALWSLLTNHLTFALLLVKTSKNISVSACPSPKYVSR*PARCISLISLISLHICEKIL*TLKLDPTSLLIISPSLLKTAENSL*GLSINAEFVEYSFITVNPVSVSRNDFTAQLSNILS*CKS*AITFKLPVFTPGSRRTVIKTGLNSIFR*SNAF*DVIRLRTFTP*IG*FNRYSASHCVSLQHVRRVISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYSRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRF  3022

Range 6: 3173 to 3736 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
412.1 bits(893) 0.0 179/188(95%) 0/188(0%) Minus/Plus
Query        1  TNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKALITNTVCKMSIETARSFIGDLILVADSSVSALEEAKSIRDNFRLRKRRGKYFYSGVCGSDVAKVRYILSGENRGLGYTDSLKLACVGREGGGNILQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILI  564
                TNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKALITNTVCKMSIETARSFIGDLILVADSSVSALEEAKSI+DNFRLRKRRGKY+YSG CGSDVAKV+YILSGENRGLG  DSLKL CVGR+GGGN+LQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILI
Subject   3173  TNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKALITNTVCKMSIETARSFIGDLILVADSSVSALEEAKSIKDNFRLRKRRGKYYYSGDCGSDVAKVKYILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILI  3736

Range 7: 3237 to 3728 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
321.8 bits(696) 0.0 149/164(91%) 0/164(0%) Minus/Plus
Query        9  SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL*SLTQSVRCR*KQPEVLSET*YSSPTPLFQRWKKRNQLEIISA*EKGEASIFIVVFVDPTLRKLGIFCQGRIED*GTQIP*N*PA*VEKEVETYYSTY*SHL*VKASWTYRLLSCRSFPPCTIMT*QPCT  500
                SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL*SLTQSVRCR*KQPEVLSET*YSSPTPLFQRWKKRNQL+IISA*EKGEASI IVV VDPTLRKL IFC GRIED G  IP*+* A*V+KEVETYYSTY*SHL VKASWTYRLL CRSFPPCTIMT*Q  T
Subject   3237  SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL*SLTQSVRCR*KQPEVLSET*YSSPTPLFQRWKKRNQLKIISA*EKGEASIIIVVIVDPTLRKLSIFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFT  3728

Range 8: 3083 to 3418 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
256.7 bits(554) 0.0 112/112(100%) 0/112(0%) Plus/Minus
Query      319  GVGDEY*VSDKTSGCFYRHLTDCVSDQSLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QP*DKIAERKQLHLNPG*SDDKT*V  654
                GVGDEY*VSDKTSGCFYRHLTDCVSDQSLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QP*DKIAERKQLHLNPG*SDDKT*V
Subject   3083  GVGDEY*VSDKTSGCFYRHLTDCVSDQSLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QP*DKIAERKQLHLNPG*SDDKT*V  3418

Range 9: 1996 to 2313 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
227.0 bits(489) 0.0 103/106(97%) 0/106(0%) Plus/Minus
Query     1424  KYLIKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIMFPISRGV*LPAFERTSLRSLAFICRASVIGKYRSS*ISAS  1741
                KYL+KDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATI+FPISRGV*LP FERTSLRSLAFICRASVIGKYRSS*ISAS
Subject   1996  KYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISAS  2313

Range 10: 2424 to 2723 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
203.6 bits(438) 0.0 91/100(91%) 0/100(0%) Plus/Minus
Query     1014  FHNGESSVSVSK*LYHTIVEYXXXXXXISYHFQTTSVYAGITANCN*NWSEFHL*IIKCFLRCYTSPNLYALN*LI*SL*RKPLR*PSTRPPGNICYPVV  1313
                FHN ESSV VSK LY  ++EY+VVV*VISYHFQTTSVYAGITANCN*NWSEFHL*IIKCFLRCYTSPNLYALN LI*SL*RKPLR*PSTRPPGNICYPVV
Subject   2424  FHNSESSVGVSKRLYRAVIEYIVVV*VISYHFQTTSVYAGITANCN*NWSEFHL*IIKCFLRCYTSPNLYALNWLI*SL*RKPLR*PSTRPPGNICYPVV  2723

Range 11: 3499 to 3735 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
172.4 bits(370) 0.0 71/79(90%) 0/79(0%) Plus/Minus
Query        2  IKMYRAVTSLLYKAERICTIINDRSMML*PRDEISKCCSMFPPPSLPTQASFKESVYPNPRFSPDKIYLTFATSDPQTP  238
                IKM  AVTSLLYKAERICTIINDRSMML*PRDEISKCCS FPPP LPTQ SFKES +PNPRFSPDKIYLTFATSDPQ+P
Subject   3499  IKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKIYLTFATSDPQSP  3735

Range 12: 2356 to 2952 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
395.1 bits(856) 0.0 189/199(95%) 0/199(0%) Plus/Minus
Query      785  HQKIYQCQPARLLNMFLGNRHVVSR*SR*YLYTFAKRCCKP*NSILHRYLSSHLPY*KPRKTVYKDLV*TLNSSNTLS*R*IQCQCLEMTLPHNCRICCRSVSHKLSLSNYQCLRRDHGEL*LKLV*IPSLDNQMLSKMLYVSEPLRLKXXXXXXXXXXXXXXFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG  1381
                HQKIYQCQPARLLNMFLGNRHVVSR*SR*YLYTFAKR CKP*NSILHRYLSSHLPY*+PRKTVYKDLV*TLNSSN LS*+*IQC+CLE TLP + RI CRSVSHKLSLSNYQCLRRDHGEL*LKLV*IPSLDNQMLSKMLYVSEPLRLKLADLIAIAQAIALAFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG
Subject   2356  HQKIYQCQPARLLNMFLGNRHVVSR*SR*YLYTFAKRYCKP*NSILHRYLSSHLPY*RPRKTVYKDLV*TLNSSNILS*Q*IQCRCLETTLPRSYRIYCRSVSHKLSLSNYQCLRRDHGEL*LKLV*IPSLDNQMLSKMLYVSEPLRLKLADLIAIAQAIALAFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG  2952

Range 13: 3455 to 3736 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
160.1 bits(343) 0.0 78/94(83%) 0/94(0%) Plus/Minus
Query        1  DQDVQGCHVIIVQGGKDLHDNKR*VHDALT*R*D**VL*YVSTSFSTYAG*FQGICVP*SSILP*QNIPNFRNVGSTNTTIKILASPFS*AEII  282
                +Q+V+ CHVIIVQGGKDLH+NKR*VHDALT R*D**VL*YVSTS STYA * QGI  P SSILP QNI NFRNVGST TTI ILASPFS*AEII
Subject   3455  NQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNILNFRNVGSTITTIIILASPFS*AEII  3736

Range 14: 1995 to 2213 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
153.2 bits(328) 0.0 67/73(92%) 0/73(0%) Plus/Minus
Query     1524  FDLIRSPPYTHL*RLYSLQ*SRVRKVVSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH  1742
                FDLIRSPPYT L*RLYSLQ*SRVRKVVSWPLS SPYLVVFDSRLSKERVCV LRLSVELP S NTA RRYPLH
Subject   1995  FDLIRSPPYTRL*RLYSLQ*SRVRKVVSWPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH  2213

Range 15: 3226 to 3450 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
133.9 bits(286) 0.0 75/75(100%) 0/75(0%) Plus/Minus
Query      287  IDFXXXXXXXXXXXXXIKSPIKLLAVSIDILQTVLVIKAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL  511
                IDFASSNAETEESATSIKSPIKLLAVSIDILQTVLVIKAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL
Subject   3226  IDFASSNAETEESATSIKSPIKLLAVSIDILQTVLVIKAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL  3450

Range 16: 3013 to 3174 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.4 bits(263) 0.0 53/54(98%) 0/54(0%) Plus/Minus
Query      563  VLSDFDNLKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSNRSISH  724
                VLSDFDNLKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSN SISH
Subject   3013  VLSDFDNLKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSNHSISH  3174

Range 17: 2274 to 2381 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.0 bits(164) 0.0 34/36(94%) 0/36(0%) Plus/Minus
Query     1356  A*LGQCTLAEFSSL*VA*WWCE*NTS*RIAQCWLET  1463
                A*LGQ TLAEFSSL*V *WWCE*NTS*RIAQCWLET
Subject   2274  A*LGQYTLAEFSSL*VK*WWCE*NTS*RIAQCWLET  2381

Grapevine leafroll associated virus 3 isolate 8 24 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130322.1 Length: 4711 Number of Matches: 17

Range 1: 1996 to 3735 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1175.5 bits(2559) 0.0 541/580(93%) 0/580(0%) Minus/Plus
Query        2  *SGYLRRAVFTDYGSSTDKRKATQTRSFESRESNTTRYGEHDSGHDTTFRTLLYCKEYKRQRWV*GGDRIRSKEGLLELFGSKGSYIRREIRRVSNQHCAILYEVFYSHHHYATYREENSASVHCPS*ARRPEEVHSVLLRLRTTG*QILPGGRVEG*RNGLRYSD*IS*FKA*RFGDV*HLRKHLII*RWNSDQF*LQFAVIPA*TLVV*K**LMXXXXXXXXTIVW*SHFETLTLDSPL*KSIRRIQRLY*VLINCFPRFLIRKVR**VTM*DRVSGFTTSFRKCVKISTRSARYNVPVT*KHI*ETGRLTLIYFLMS*PTTKQR*GG*LIKTIARGVGY*TI*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGFDH*HSL*DVDRNSQKFYRRLNTRRRLLCFSVGRSEIN*R*FPLKKKERQVFL*WCLWIRRCES*VYFVRGESRIRVHRFLETSLRR*RRRWKHTTALTNLISRLKHHGPIVYYRADPFRLVQ**RDSPVHLD  1741
                *SGYLR AVF D GSSTDKRK TQTRSFE RESNTTRYGE+DSGHDTTFRTLLYCKEYKRQR V*GGDRIRSKE LL+LFGSKGSYIRREIR VSNQHCAIL+EVFYSHHHY TYREENSASV+CPS*ARRPEEVHSVLLRLRTTG*QILPGGRVEG*RNGLRYSD*IS FKA*RFGDV*HLRKHLII*RWNSDQF*LQFAVIPA*TLVV*K**LMTYTTT YS    *S FET TLDS L*K+IRRIQRLY*VLINCFPR LIRKVR**VTM*DRVSGFT SFRKCVKISTRSARYNVPVT*KHI*ETGRLTLIYFLMS*PTTKQR*GG*LIKTIARGVGY* I*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGFDH*HSL*DVDRNSQKFYRRLNTRRRLLCFSVGRSEIN*R*FPLKKKERQV L*W LWIRRCES*VYFV GESRI V RFLE SLRR* RRWK TTALTNLIS LKHHGPIVYY ADPFRLVQ**RDS +H D
Subject   1996  *SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYCKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYFTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QILPGGRVEG*RNGLRYSD*ISQFKA*RFGDV*HLRKHLII*RWNSDQF*LQFAVIPA*TLVV*K**LMTYTTTIYSITAR*SRFETPTLDSLL*KNIRRIQRLY*VLINCFPRSLIRKVR**VTM*DRVSGFTISFRKCVKISTRSARYNVPVT*KHI*ETGRLTLIYFLMS*PTTKQR*GG*LIKTIARGVGY*MI*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGFDH*HSL*DVDRNSQKFYRRLNTRRRLLCFSVGRSEIN*R*FPLKKKERQVLL*W*LWIRRCES*VYFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD  3735

Range 2: 1995 to 3197 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
865.7 bits(1883) 0.0 387/401(97%) 0/401(0%) Minus/Plus
Query      540  MKRISTTSGIYRLRKLYR*TQGYADSFFRKPGVKHHEIWGT**WP*YNFSYSTLL*RI*ASKMGIGWRPN*VKRRST*VIRK*GKLY*EGNTTRLQPTLCDPL*GIXXXXXXXXXXXRKFSQRTLP*LSTASRRGSLRTASTSHYWITDITRRTC*RLTQWLAL*RLNQLI*GVKVRRRITS*KAFDYLKMEFRPVLITVRRDPGVNTGSLKVIAYDLHYDNIFDNCVVKSFRDTDTGFTVMKEYSTNSAFILSPYKLFSAVFNKEGEMISNDVGSSFRVYNIFSQMCKDINEISEIQRAGYLETYLGDGQADTDIFFDVLTNNKAKVRWLVNKDHSAWCGILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*GCQSRLERTITWF*Y  1742
                MKRIST SGI R RKLYR*TQ YADSFFRK GVKHHEIWG **WP*YNFSYSTLL*RI*ASK GIGWRPN*VKR+ST*VIRK*GKLY*EGNT RLQPTLCDP *GILLTPPL YL*RRKFSQR LP*LSTASRRGSLRTASTSHYWITDITRRTC*RLTQWLAL*RLNQ I*GVKVRRRITS*KAFDYLKMEFRPVLITVRRDPGVNTGSLKVIAYDLHYDNIFDNC VKSFRDTDTGFTVMKEYSTNSAFILSPYKLFSAVFNKEGEMISNDVGSSFRVYNIFSQMCKDINEISEIQRAGYLETYLGDGQADTDIFFDVLTNNKAKVRWLVNKDHSAWCGILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*GCQSRLERTITWF*Y
Subject   1995  MKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLL*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDITRRTC*RLTQWLAL*RLNQPI*GVKVRRRITS*KAFDYLKMEFRPVLITVRRDPGVNTGSLKVIAYDLHYDNIFDNCAVKSFRDTDTGFTVMKEYSTNSAFILSPYKLFSAVFNKEGEMISNDVGSSFRVYNIFSQMCKDINEISEIQRAGYLETYLGDGQADTDIFFDVLTNNKAKVRWLVNKDHSAWCGILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*GCQSRLERTITWF*Y  3197

Range 3: 1997 to 3124 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
830.4 bits(1806) 0.0 365/376(97%) 0/376(0%) Minus/Plus
Query      613  EADIYDERYLPITEALQINARLRRLVLSKAGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAMACAIAIKSANLRRKGSETYNILESI*LSKDGIQTSFNYSSP*SRRKHW*FESDSL*LTLRQHIRQLCGKVISRH*HWIHRYERVFDEFSVYTKSL*TVFRGF**GR*DDK*RCRIEFQGLQHLFANV*RYQRDQRDTTCRLPRNIFRRRAG*H*YIF*CLNQQQSKGKVVS**RP*RVVWDIERFEVGREQQGEI*GERHTRYLRFIV*LSRV*MK  1740
                EADIYDERYLPITEALQINARLRRLVLSK GSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAMACAIAIKSANLRRKGSETYNILESI*LSKDGIQTSFNYSSP*SRRKHW*FESDSL*LTLRQ+IR L GKV+SRH HWIH YER+FDEFSVYTKSL*TVFRG **GR*DDK*RCRIEFQGLQ+LFANV*RYQRDQRDTTCRLPRNIFRRRAG*H*YIF*CLNQQQSKGKVVS**RP*RVVWDIE FEVGREQQGEI*GERHTRYLRFIV*LSRV*MK
Subject   1997  EADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAMACAIAIKSANLRRKGSETYNILESI*LSKDGIQTSFNYSSP*SRRKHW*FESDSL*LTLRQYIR*LRGKVVSRHRHWIHCYERIFDEFSVYTKSL*TVFRGL**GR*DDK*RCRIEFQGLQYLFANV*RYQRDQRDTTCRLPRNIFRRRAG*H*YIF*CLNQQQSKGKVVS**RP*RVVWDIE*FEVGREQQGEI*GERHTRYLRFIV*LSRV*MK  3124

Range 4: 2763 to 3734 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
671.0 bits(1458) 0.0 307/324(95%) 0/324(0%) Plus/Minus
Query        3  SRCTGLSRHYCTRRKGSAR**TIGP*CFNLEMRLVSAVVCFHLLLYLRRLVSRNLCTLILDSPLTKYT*LSQRRIHKHHYKNTCLSFFLSGNYL*LISLLPTLKQXXXXXXXXXXXNFWLFLSTSYRLC**SKPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPLQIVQYPTPRAMVFIN*PPYLCFVVG*DIKKYISVSLPVS*ICF*VTGTLYLADLVDIFTHLRKDVVNPETRSYIVTYHLTFLIKNRGKQF  974
                S+C  LSRHYCTRRKGSA+**TIGP*CFN EMRLVSAVV FHLL+YLR+L SRNL T ILDSP TKYT*LSQRRIH HHY NTCLSFFLSGNYL*LISLLPTLKQRSRRRVLSLR*NFWLFLSTSYRLC**SKPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPLQI+QYPTPRAMVFIN*PPYLCFVVG*DIKKYISVSLPVS*ICF*VTGTLYLADLVDIFTHLRKD+VNPETRSYIVTYHLTFLIK+RGKQF
Subject   2763  SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKYT*LSQRRIHNHHYNNTCLSFFLSGNYL*LISLLPTLKQRSRRRVLSLR*NFWLFLSTSYRLC**SKPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPLQIIQYPTPRAMVFIN*PPYLCFVVG*DIKKYISVSLPVS*ICF*VTGTLYLADLVDIFTHLRKDIVNPETRSYIVTYHLTFLIKDRGKQF  3734

Range 5: 1997 to 3022 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
663.6 bits(1442) 0.0 325/342(95%) 0/342(0%) Plus/Minus
Query      715  NIPHHALWSXXXXXXXXXXXXVKTSKNISVSACPSPKYVSR*PARCXXXXXXXXXHICEKML*TLKXXXXXXXXXXXXXXKTAENSL*GLSINAEFVEYSFITVNPVSVSRNDFTTQLSNMLS*CKS*AITFKLPVFTPGSRRTVIKTGLNSIFR*SNAF*DVIRLRTFTP*IS*FNRYSASHCVSLQHVRRVISVIQ*CEVEAVRSEPLRDAVLS*GSVRWLNFLLYK*RNGGVSKIPHKGSHSVGWRRVVFPS*YSFPYFRITQVDLLLT*FGLHPIPIFDAYILYSRVEYEKLYHGHYHVPHISWCLTPGFRKNESA*PCVYL*SFRNR*IPLVVDIRF  1740
                NIPHHALWSLLTNHLTFALLLVKTSKNISVSACPSPKYVSR*PARCISLISLISLHICEK+L*TLKLDPTSLLIISPSLLKTAENSL*GLSINAEFVEYSFITVNPVSVSRNDFT QLSN+LS*CKS*AITFKLPVFTPGSRRTVIKTGLNSIFR*SNAF*DVIRLRTFTP*I *FNRYSASHCVSLQHVRRVISVIQ*CEVEAVRSEPLRDAVLS*GS+RWLNFLLYK* NGGVSKIPH+GSHSVGWRR+VFPS*YSFPYFRIT VD LLT*FGLHPIP+FDAYILYSRVEYEKLYHGHYH+PHISWCLTP FRKNESA* CVYL*SFR R IPL+VDIRF
Subject   1997  NIPHHALWSLLTNHLTFALLLVKTSKNISVSACPSPKYVSR*PARCISLISLISLHICEKIL*TLKLDPTSLLIISPSLLKTAENSL*GLSINAEFVEYSFITVNPVSVSRNDFTAQLSNILS*CKS*AITFKLPVFTPGSRRTVIKTGLNSIFR*SNAF*DVIRLRTFTP*IG*FNRYSASHCVSLQHVRRVISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYSRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRF  3022

Range 6: 3173 to 3736 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
412.1 bits(893) 0.0 179/188(95%) 0/188(0%) Minus/Plus
Query        1  TNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKALITNTVCKMSIETARSFIGDLILVADSSVSALEEAKSIRDNFRLRKRRGKYFYSGVCGSDVAKVRYILSGENRGLGYTDSLKLACVGREGGGNILQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILI  564
                TNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKALITNTVCKMSIETARSFIGDLILVADSSVSALEEAKSI+DNFRLRKRRGKY+YSG CGSDVAKV+YILSGENRGLG  DSLKL CVGR+GGGN+LQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILI
Subject   3173  TNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKALITNTVCKMSIETARSFIGDLILVADSSVSALEEAKSIKDNFRLRKRRGKYYYSGDCGSDVAKVKYILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILI  3736

Range 7: 3237 to 3728 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
321.8 bits(696) 0.0 149/164(91%) 0/164(0%) Minus/Plus
Query        9  SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL*SLTQSVRCR*KQPEVLSET*YSSPTPLFQRWKKRNQLEIISA*EKGEASIFIVVFVDPTLRKLGIFCQGRIED*GTQIP*N*PA*VEKEVETYYSTY*SHL*VKASWTYRLLSCRSFPPCTIMT*QPCT  500
                SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL*SLTQSVRCR*KQPEVLSET*YSSPTPLFQRWKKRNQL+IISA*EKGEASI IVV VDPTLRKL IFC GRIED G  IP*+* A*V+KEVETYYSTY*SHL VKASWTYRLL CRSFPPCTIMT*Q  T
Subject   3237  SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL*SLTQSVRCR*KQPEVLSET*YSSPTPLFQRWKKRNQLKIISA*EKGEASIIIVVIVDPTLRKLSIFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFT  3728

Range 8: 3083 to 3418 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
256.7 bits(554) 0.0 112/112(100%) 0/112(0%) Plus/Minus
Query      319  GVGDEY*VSDKTSGCFYRHLTDCVSDQSLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QP*DKIAERKQLHLNPG*SDDKT*V  654
                GVGDEY*VSDKTSGCFYRHLTDCVSDQSLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QP*DKIAERKQLHLNPG*SDDKT*V
Subject   3083  GVGDEY*VSDKTSGCFYRHLTDCVSDQSLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QP*DKIAERKQLHLNPG*SDDKT*V  3418

Range 9: 1996 to 2313 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
227.0 bits(489) 0.0 103/106(97%) 0/106(0%) Plus/Minus
Query     1424  KYLIKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIMFPISRGV*LPAFERTSLRSLAFICRASVIGKYRSS*ISAS  1741
                KYL+KDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATI+FPISRGV*LP FERTSLRSLAFICRASVIGKYRSS*ISAS
Subject   1996  KYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISAS  2313

Range 10: 2424 to 2723 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
203.6 bits(438) 0.0 91/100(91%) 0/100(0%) Plus/Minus
Query     1014  FHNGESSVSVSK*LYHTIVEYXXXXXXISYHFQTTSVYAGITANCN*NWSEFHL*IIKCFLRCYTSPNLYALN*LI*SL*RKPLR*PSTRPPGNICYPVV  1313
                FHN ESSV VSK LY  ++EY+VVV*VISYHFQTTSVYAGITANCN*NWSEFHL*IIKCFLRCYTSPNLYALN LI*SL*RKPLR*PSTRPPGNICYPVV
Subject   2424  FHNSESSVGVSKRLYRAVIEYIVVV*VISYHFQTTSVYAGITANCN*NWSEFHL*IIKCFLRCYTSPNLYALNWLI*SL*RKPLR*PSTRPPGNICYPVV  2723

Range 11: 3499 to 3735 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
172.4 bits(370) 0.0 71/79(90%) 0/79(0%) Plus/Minus
Query        2  IKMYRAVTSLLYKAERICTIINDRSMML*PRDEISKCCSMFPPPSLPTQASFKESVYPNPRFSPDKIYLTFATSDPQTP  238
                IKM  AVTSLLYKAERICTIINDRSMML*PRDEISKCCS FPPP LPTQ SFKES +PNPRFSPDKIYLTFATSDPQ+P
Subject   3499  IKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKIYLTFATSDPQSP  3735

Range 12: 2356 to 2952 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
395.1 bits(856) 0.0 189/199(95%) 0/199(0%) Plus/Minus
Query      785  HQKIYQCQPARLLNMFLGNRHVVSR*SR*YLYTFAKRCCKP*NSILHRYLSSHLPY*KPRKTVYKDLV*TLNSSNTLS*R*IQCQCLEMTLPHNCRICCRSVSHKLSLSNYQCLRRDHGEL*LKLV*IPSLDNQMLSKMLYVSEPLRLKXXXXXXXXXXXXXXFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG  1381
                HQKIYQCQPARLLNMFLGNRHVVSR*SR*YLYTFAKR CKP*NSILHRYLSSHLPY*+PRKTVYKDLV*TLNSSN LS*+*IQC+CLE TLP + RI CRSVSHKLSLSNYQCLRRDHGEL*LKLV*IPSLDNQMLSKMLYVSEPLRLKLADLIAIAQAIALAFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG
Subject   2356  HQKIYQCQPARLLNMFLGNRHVVSR*SR*YLYTFAKRYCKP*NSILHRYLSSHLPY*RPRKTVYKDLV*TLNSSNILS*Q*IQCRCLETTLPRSYRIYCRSVSHKLSLSNYQCLRRDHGEL*LKLV*IPSLDNQMLSKMLYVSEPLRLKLADLIAIAQAIALAFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG  2952

Range 13: 3455 to 3736 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
160.1 bits(343) 0.0 78/94(83%) 0/94(0%) Plus/Minus
Query        1  DQDVQGCHVIIVQGGKDLHDNKR*VHDALT*R*D**VL*YVSTSFSTYAG*FQGICVP*SSILP*QNIPNFRNVGSTNTTIKILASPFS*AEII  282
                +Q+V+ CHVIIVQGGKDLH+NKR*VHDALT R*D**VL*YVSTS STYA * QGI  P SSILP QNI NFRNVGST TTI ILASPFS*AEII
Subject   3455  NQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNILNFRNVGSTITTIIILASPFS*AEII  3736

Range 14: 1995 to 2213 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
153.2 bits(328) 0.0 67/73(92%) 0/73(0%) Plus/Minus
Query     1524  FDLIRSPPYTHL*RLYSLQ*SRVRKVVSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH  1742
                FDLIRSPPYT L*RLYSLQ*SRVRKVVSWPLS SPYLVVFDSRLSKERVCV LRLSVELP S NTA RRYPLH
Subject   1995  FDLIRSPPYTRL*RLYSLQ*SRVRKVVSWPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH  2213

Range 15: 3226 to 3450 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
133.9 bits(286) 0.0 75/75(100%) 0/75(0%) Plus/Minus
Query      287  IDFXXXXXXXXXXXXXIKSPIKLLAVSIDILQTVLVIKAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL  511
                IDFASSNAETEESATSIKSPIKLLAVSIDILQTVLVIKAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL
Subject   3226  IDFASSNAETEESATSIKSPIKLLAVSIDILQTVLVIKAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL  3450

Range 16: 3013 to 3174 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.4 bits(263) 0.0 53/54(98%) 0/54(0%) Plus/Minus
Query      563  VLSDFDNLKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSNRSISH  724
                VLSDFDNLKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSN SISH
Subject   3013  VLSDFDNLKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSNHSISH  3174

Range 17: 2274 to 2381 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.0 bits(164) 0.0 34/36(94%) 0/36(0%) Plus/Minus
Query     1356  A*LGQCTLAEFSSL*VA*WWCE*NTS*RIAQCWLET  1463
                A*LGQ TLAEFSSL*V *WWCE*NTS*RIAQCWLET
Subject   2274  A*LGQYTLAEFSSL*VK*WWCE*NTS*RIAQCWLET  2381

Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome

Sequence ID: KX756669.1 Length: 18313 Number of Matches: 17

Range 1: 15542 to 17281 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1173.6 bits(2555) 0.0 541/580(93%) 0/580(0%) Minus/Plus
Query        2  *SGYLRRAVFTDYGSSTDKRKATQTRSFESRESNTTRYGEHDSGHDTTFRTLLYCKEYKRQRWV*GGDRIRSKEGLLELFGSKGSYIRREIRRVSNQHCAILYEVFYSHHHYATYREENSASVHCPS*ARRPEEVHSVLLRLRTTG*QILPGGRVEG*RNGLRYSD*IS*FKA*RFGDV*HLRKHLII*RWNSDQF*LQFAVIPA*TLVV*K**LMXXXXXXXXTIVW*SHFETLTLDSPL*KSIRRIQRLY*VLINCFPRFLIRKVR**VTM*DRVSGFTTSFRKCVKISTRSARYNVPVT*KHI*ETGRLTLIYFLMS*PTTKQR*GG*LIKTIARGVGY*TI*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGFDH*HSL*DVDRNSQKFYRRLNTRRRLLCFSVGRSEIN*R*FPLKKKERQVFL*WCLWIRRCES*VYFVRGESRIRVHRFLETSLRR*RRRWKHTTALTNLISRLKHHGPIVYYRADPFRLVQ**RDSPVHLD  1741
                *SGYLR AVF D GSSTDKRK TQTRSFE RESNTTRYGE+DSGHDTTFRTLLY KEYKRQR V*GGDRIRSKE LL+LFGSKGSYIRREIR VSNQHCAIL+EVFYSHHHY+TYREENSASV+CPS*ARRPEEVHSVLLRLRTTG*QILPGGRVEG*RNGLRYSD*IS*FKA*RFGDV*HLRKHLII*RWNSDQF*LQFAVIPA*TLVV*K**LMTYTTT YS    *S FET TLDS L*K+IRRIQRLY*VLINCFPR LIRKVR**VTM*DRVSGFT SFRKCVKISTRSARYNVPVT*KHI*ETGRLTLIYFLMS*PTTKQR*GG*LIKTIARGVGY* I*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGFDH*HSL*DVDRNSQKFYRRLNTRRRLLCFSVGRSEIN*R*FPLKKKERQV L*W LWIRRCES*VYFV GESRI V RFLE SLRR* RRWK TTALTNLIS LKHHGPIVYY ADPFRLVQ**RDS +H D
Subject  15542  *SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYRKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QILPGGRVEG*RNGLRYSD*IS*FKA*RFGDV*HLRKHLII*RWNSDQF*LQFAVIPA*TLVV*K**LMTYTTTIYSITAR*SRFETPTLDSLL*KNIRRIQRLY*VLINCFPRSLIRKVR**VTM*DRVSGFTISFRKCVKISTRSARYNVPVT*KHI*ETGRLTLIYFLMS*PTTKQR*GG*LIKTIARGVGY*MI*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGFDH*HSL*DVDRNSQKFYRRLNTRRRLLCFSVGRSEIN*R*FPLKKKERQVLL*W*LWIRRCES*VYFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD  17281

Range 2: 15541 to 16743 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
865.7 bits(1883) 0.0 387/401(97%) 0/401(0%) Minus/Plus
Query      540  MKRISTTSGIYRLRKLYR*TQGYADSFFRKPGVKHHEIWGT**WP*YNFSYSTLL*RI*ASKMGIGWRPN*VKRRST*VIRK*GKLY*EGNTTRLQPTLCDPL*GIXXXXXXXXXXXRKFSQRTLP*LSTASRRGSLRTASTSHYWITDITRRTC*RLTQWLAL*RLNQLI*GVKVRRRITS*KAFDYLKMEFRPVLITVRRDPGVNTGSLKVIAYDLHYDNIFDNCVVKSFRDTDTGFTVMKEYSTNSAFILSPYKLFSAVFNKEGEMISNDVGSSFRVYNIFSQMCKDINEISEIQRAGYLETYLGDGQADTDIFFDVLTNNKAKVRWLVNKDHSAWCGILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*GCQSRLERTITWF*Y  1742
                MKRIST SGI R RKLYR*TQ YADSFFRK GVKHHEIWG **WP*YNFSYSTL *RI*ASK GIGWRPN*VKR+ST*VIRK*GKLY*EGNT RLQPTLCDP *GILLTPPL YL*RRKFSQR LP*LSTASRRGSLRTASTSHYWITDITRRTC*RLTQWLAL*RLNQLI*GVKVRRRITS*KAFDYLKMEFRPVLITVRRDPGVNTGSLKVIAYDLHYDNIFDNC VKSFRDTDTGFTVMKEYSTNSAFILSPYKLFSAVFNKEGEMISNDVGSSFRVYNIFSQMCKDINEISEIQRAGYLETYLGDGQADTDIFFDVLTNNKAKVRWLVNKDHSAWCGILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*GCQSRLERTITWF*Y
Subject  15541  MKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLP*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDITRRTC*RLTQWLAL*RLNQLI*GVKVRRRITS*KAFDYLKMEFRPVLITVRRDPGVNTGSLKVIAYDLHYDNIFDNCAVKSFRDTDTGFTVMKEYSTNSAFILSPYKLFSAVFNKEGEMISNDVGSSFRVYNIFSQMCKDINEISEIQRAGYLETYLGDGQADTDIFFDVLTNNKAKVRWLVNKDHSAWCGILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*GCQSRLERTITWF*Y  16743

Range 3: 15543 to 16670 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
830.4 bits(1806) 0.0 365/376(97%) 0/376(0%) Minus/Plus
Query      613  EADIYDERYLPITEALQINARLRRLVLSKAGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAMACAIAIKSANLRRKGSETYNILESI*LSKDGIQTSFNYSSP*SRRKHW*FESDSL*LTLRQHIRQLCGKVISRH*HWIHRYERVFDEFSVYTKSL*TVFRGF**GR*DDK*RCRIEFQGLQHLFANV*RYQRDQRDTTCRLPRNIFRRRAG*H*YIF*CLNQQQSKGKVVS**RP*RVVWDIERFEVGREQQGEI*GERHTRYLRFIV*LSRV*MK  1740
                EADIYDERYLPITEALQINARLRRLVLSK GSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAMACAIAIKSANLRRKGSETYNILESI*LSKDGIQTSFNYSSP*SRRKHW*FESDSL*LTLRQ+IR L GKV+SRH HWIH YER+FDEFSVYTKSL*TVFRG **GR*DDK*RCRIEFQGLQ+LFANV*RYQRDQRDTTCRLPRNIFRRRAG*H*YIF*CLNQQQSKGKVVS**RP*RVVWDIE FEVGREQQGEI*GERHTRYLRFIV*LSRV*MK
Subject  15543  EADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAMACAIAIKSANLRRKGSETYNILESI*LSKDGIQTSFNYSSP*SRRKHW*FESDSL*LTLRQYIR*LRGKVVSRHRHWIHCYERIFDEFSVYTKSL*TVFRGL**GR*DDK*RCRIEFQGLQYLFANV*RYQRDQRDTTCRLPRNIFRRRAG*H*YIF*CLNQQQSKGKVVS**RP*RVVWDIE*FEVGREQQGEI*GERHTRYLRFIV*LSRV*MK  16670

Range 4: 16309 to 17280 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
671.0 bits(1458) 0.0 307/324(95%) 0/324(0%) Plus/Minus
Query        3  SRCTGLSRHYCTRRKGSAR**TIGP*CFNLEMRLVSAVVCFHLLLYLRRLVSRNLCTLILDSPLTKYT*LSQRRIHKHHYKNTCLSFFLSGNYL*LISLLPTLKQXXXXXXXXXXXNFWLFLSTSYRLC**SKPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPLQIVQYPTPRAMVFIN*PPYLCFVVG*DIKKYISVSLPVS*ICF*VTGTLYLADLVDIFTHLRKDVVNPETRSYIVTYHLTFLIKNRGKQF  974
                S+C  LSRHYCTRRKGSA+**TIGP*CFN EMRLVSAVV FHLL+YLR+L SRNL T ILDSP TKYT*LSQRRIH HHY NTCLSFFLSGNYL*LISLLPTLKQRSRRRVLSLR*NFWLFLSTSYRLC**SKPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPLQI+QYPTPRAMVFIN*PPYLCFVVG*DIKKYISVSLPVS*ICF*VTGTLYLADLVDIFTHLRKD+VNPETRSYIVTYHLTFLIK+RGKQF
Subject  16309  SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKYT*LSQRRIHNHHYNNTCLSFFLSGNYL*LISLLPTLKQRSRRRVLSLR*NFWLFLSTSYRLC**SKPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPLQIIQYPTPRAMVFIN*PPYLCFVVG*DIKKYISVSLPVS*ICF*VTGTLYLADLVDIFTHLRKDIVNPETRSYIVTYHLTFLIKDRGKQF  17280

Range 5: 15543 to 16568 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
663.6 bits(1442) 0.0 325/342(95%) 0/342(0%) Plus/Minus
Query      715  NIPHHALWSXXXXXXXXXXXXVKTSKNISVSACPSPKYVSR*PARCXXXXXXXXXHICEKML*TLKXXXXXXXXXXXXXXKTAENSL*GLSINAEFVEYSFITVNPVSVSRNDFTTQLSNMLS*CKS*AITFKLPVFTPGSRRTVIKTGLNSIFR*SNAF*DVIRLRTFTP*IS*FNRYSASHCVSLQHVRRVISVIQ*CEVEAVRSEPLRDAVLS*GSVRWLNFLLYK*RNGGVSKIPHKGSHSVGWRRVVFPS*YSFPYFRITQVDLLLT*FGLHPIPIFDAYILYSRVEYEKLYHGHYHVPHISWCLTPGFRKNESA*PCVYL*SFRNR*IPLVVDIRF  1740
                NIPHHALWSLLTNHLTFALLLVKTSKNISVSACPSPKYVSR*PARCISLISLISLHICEK+L*TLKLDPTSLLIISPSLLKTAENSL*GLSINAEFVEYSFITVNPVSVSRNDFT QLSN+LS*CKS*AITFKLPVFTPGSRRTVIKTGLNSIFR*SNAF*DVIRLRTFTP*IS*FNRYSASHCVSLQHVRRVISVIQ*CEVEAVRSEPLRDAVLS*GS+RWLNFLLYK* NGGVSKIPH+GSHSVGWRR+VFPS*YSFPYFRIT VD LLT*FGLHPIP+FDAYILY RVEYEKLYHGHYH+PHISWCLTP FRKNESA* CVYL*SFR R IPL+VDIRF
Subject  15543  NIPHHALWSLLTNHLTFALLLVKTSKNISVSACPSPKYVSR*PARCISLISLISLHICEKIL*TLKLDPTSLLIISPSLLKTAENSL*GLSINAEFVEYSFITVNPVSVSRNDFTAQLSNILS*CKS*AITFKLPVFTPGSRRTVIKTGLNSIFR*SNAF*DVIRLRTFTP*IS*FNRYSASHCVSLQHVRRVISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYGRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRF  16568

Range 6: 16719 to 17282 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
412.1 bits(893) 0.0 179/188(95%) 0/188(0%) Minus/Plus
Query        1  TNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKALITNTVCKMSIETARSFIGDLILVADSSVSALEEAKSIRDNFRLRKRRGKYFYSGVCGSDVAKVRYILSGENRGLGYTDSLKLACVGREGGGNILQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILI  564
                TNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKALITNTVCKMSIETARSFIGDLILVADSSVSALEEAKSI+DNFRLRKRRGKY+YSG CGSDVAKV+YILSGENRGLG  DSLKL CVGR+GGGN+LQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILI
Subject  16719  TNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKALITNTVCKMSIETARSFIGDLILVADSSVSALEEAKSIKDNFRLRKRRGKYYYSGDCGSDVAKVKYILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILI  17282

Range 7: 16783 to 17274 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
321.8 bits(696) 0.0 149/164(91%) 0/164(0%) Minus/Plus
Query        9  SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL*SLTQSVRCR*KQPEVLSET*YSSPTPLFQRWKKRNQLEIISA*EKGEASIFIVVFVDPTLRKLGIFCQGRIED*GTQIP*N*PA*VEKEVETYYSTY*SHL*VKASWTYRLLSCRSFPPCTIMT*QPCT  500
                SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL*SLTQSVRCR*KQPEVLSET*YSSPTPLFQRWKKRNQL+IISA*EKGEASI IVV VDPTLRKL IFC GRIED G  IP*+* A*V+KEVETYYSTY*SHL VKASWTYRLL CRSFPPCTIMT*Q  T
Subject  16783  SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL*SLTQSVRCR*KQPEVLSET*YSSPTPLFQRWKKRNQLKIISA*EKGEASIIIVVIVDPTLRKLSIFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFT  17274

Range 8: 16629 to 16964 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
256.7 bits(554) 0.0 112/112(100%) 0/112(0%) Plus/Minus
Query      319  GVGDEY*VSDKTSGCFYRHLTDCVSDQSLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QP*DKIAERKQLHLNPG*SDDKT*V  654
                GVGDEY*VSDKTSGCFYRHLTDCVSDQSLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QP*DKIAERKQLHLNPG*SDDKT*V
Subject  16629  GVGDEY*VSDKTSGCFYRHLTDCVSDQSLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QP*DKIAERKQLHLNPG*SDDKT*V  16964

Range 9: 15542 to 15859 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
227.0 bits(489) 0.0 103/106(97%) 0/106(0%) Plus/Minus
Query     1424  KYLIKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIMFPISRGV*LPAFERTSLRSLAFICRASVIGKYRSS*ISAS  1741
                KYL+KDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATI+FPISRGV*LP FERTSLRSLAFICRASVIGKYRSS*ISAS
Subject  15542  KYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISAS  15859

Range 10: 15970 to 16269 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
205.9 bits(443) 0.0 92/100(92%) 0/100(0%) Plus/Minus
Query     1014  FHNGESSVSVSK*LYHTIVEYXXXXXXISYHFQTTSVYAGITANCN*NWSEFHL*IIKCFLRCYTSPNLYALN*LI*SL*RKPLR*PSTRPPGNICYPVV  1313
                FHN ESSV VSK LY  ++EY+VVV*VISYHFQTTSVYAGITANCN*NWSEFHL*IIKCFLRCYTSPNLYALN*LI*SL*RKPLR*PSTRPPGNICYPVV
Subject  15970  FHNSESSVGVSKRLYRAVIEYIVVV*VISYHFQTTSVYAGITANCN*NWSEFHL*IIKCFLRCYTSPNLYALN*LI*SL*RKPLR*PSTRPPGNICYPVV  16269

Range 11: 17045 to 17281 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
172.4 bits(370) 0.0 71/79(90%) 0/79(0%) Plus/Minus
Query        2  IKMYRAVTSLLYKAERICTIINDRSMML*PRDEISKCCSMFPPPSLPTQASFKESVYPNPRFSPDKIYLTFATSDPQTP  238
                IKM  AVTSLLYKAERICTIINDRSMML*PRDEISKCCS FPPP LPTQ SFKES +PNPRFSPDKIYLTFATSDPQ+P
Subject  17045  IKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKIYLTFATSDPQSP  17281

Range 12: 15902 to 16498 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
395.1 bits(856) 0.0 189/199(95%) 0/199(0%) Plus/Minus
Query      785  HQKIYQCQPARLLNMFLGNRHVVSR*SR*YLYTFAKRCCKP*NSILHRYLSSHLPY*KPRKTVYKDLV*TLNSSNTLS*R*IQCQCLEMTLPHNCRICCRSVSHKLSLSNYQCLRRDHGEL*LKLV*IPSLDNQMLSKMLYVSEPLRLKXXXXXXXXXXXXXXFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG  1381
                HQKIYQCQPARLLNMFLGNRHVVSR*SR*YLYTFAKR CKP*NSILHRYLSSHLPY*+PRKTVYKDLV*TLNSSN LS*+*IQC+CLE TLP + RI CRSVSHKLSLSNYQCLRRDHGEL*LKLV*IPSLDNQMLSKMLYVSEPLRLKLADLIAIAQAIALAFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG
Subject  15902  HQKIYQCQPARLLNMFLGNRHVVSR*SR*YLYTFAKRYCKP*NSILHRYLSSHLPY*RPRKTVYKDLV*TLNSSNILS*Q*IQCRCLETTLPRSYRIYCRSVSHKLSLSNYQCLRRDHGEL*LKLV*IPSLDNQMLSKMLYVSEPLRLKLADLIAIAQAIALAFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG  16498

Range 13: 17001 to 17282 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
160.1 bits(343) 0.0 78/94(83%) 0/94(0%) Plus/Minus
Query        1  DQDVQGCHVIIVQGGKDLHDNKR*VHDALT*R*D**VL*YVSTSFSTYAG*FQGICVP*SSILP*QNIPNFRNVGSTNTTIKILASPFS*AEII  282
                +Q+V+ CHVIIVQGGKDLH+NKR*VHDALT R*D**VL*YVSTS STYA * QGI  P SSILP QNI NFRNVGST TTI ILASPFS*AEII
Subject  17001  NQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNILNFRNVGSTITTIIILASPFS*AEII  17282

Range 14: 15541 to 15759 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
151.4 bits(324) 0.0 66/73(90%) 0/73(0%) Plus/Minus
Query     1524  FDLIRSPPYTHL*RLYSLQ*SRVRKVVSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH  1742
                FDLIRSPPYT L*RLYSL+*SRVRKVVSWPLS SPYLVVFDSRLSKERVCV LRLSVELP S NTA RRYPLH
Subject  15541  FDLIRSPPYTRL*RLYSLR*SRVRKVVSWPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH  15759

Range 15: 16772 to 16996 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
133.9 bits(286) 0.0 75/75(100%) 0/75(0%) Plus/Minus
Query      287  IDFXXXXXXXXXXXXXIKSPIKLLAVSIDILQTVLVIKAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL  511
                IDFASSNAETEESATSIKSPIKLLAVSIDILQTVLVIKAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL
Subject  16772  IDFASSNAETEESATSIKSPIKLLAVSIDILQTVLVIKAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL  16996

Range 16: 16559 to 16720 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.4 bits(263) 0.0 53/54(98%) 0/54(0%) Plus/Minus
Query      563  VLSDFDNLKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSNRSISH  724
                VLSDFDNLKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSN SISH
Subject  16559  VLSDFDNLKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSNHSISH  16720

Range 17: 15820 to 15927 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.0 bits(164) 0.0 34/36(94%) 0/36(0%) Plus/Minus
Query     1356  A*LGQCTLAEFSSL*VA*WWCE*NTS*RIAQCWLET  1463
                A*LGQ TLAEFSSL*V *WWCE*NTS*RIAQCWLET
Subject  15820  A*LGQYTLAEFSSL*VE*WWCE*NTS*RIAQCWLET  15927

Nucleotide Sequence (313 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
32
64
96
128
160
192
224
256
288
313

Descriptions

Alignments

Grapevine leafroll associated virus 3 isolate 3 3 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130283.1 Length: 4711 Number of Matches: 6

Range 1: 1826 to 2134 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
254.0 bits(548) 0.0 102/103(99%) 0/103(0%) Minus/Minus
Query        3  YHGHYHVPHISWCLTPAFRKNESA*PCVYL*SFRNR*IPLVVDIRFIDRQH*VGKTYLALPPGVDQFRYVRR*SHYV*LL*WTYTFRRRWCYWTWR*QRRIVD  311
                YHGHYHVPHISWCLTPAFRKNESA*PCVYL*SFRNR*IPLVVDIRFIDR H*VGKTYLALPPGVDQFRYVRR*SHYV*LL*WTYTFRRRWCYWTWR*QRRIVD
Subject   1826  YHGHYHVPHISWCLTPAFRKNESA*PCVYL*SFRNR*IPLVVDIRFIDR*H*VGKTYLALPPGVDQFRYVRR*SHYV*LL*WTYTFRRRWCYWTWR*QRRIVD  2134

Range 2: 1825 to 2136 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
246.7 bits(532) 0.0 103/104(99%) 0/104(0%) Plus/Plus
Query        2  HRRCDVVSAKSSSTSAYGRCRSIRATRRSGFNV*RNGIDQHQGAGQDKFSRLSVVDQ*SGYLRRAVFTDYGSSTDKRKATQTRSFERRESNTTRYGEHDSGHDT  313
                HRRCDVVSAKSSSTSAYGRCRSIRATRRSGFNV*RNGIDQHQGAGQDKFSRLSV+DQ*SGYLRRAVFTDYGSSTDKRKATQTRSFERRESNTTRYGEHDSGHDT
Subject   1825  HRRCDVVSAKSSSTSAYGRCRSIRATRRSGFNV*RNGIDQHQGAGQDKFSRLSVIDQ*SGYLRRAVFTDYGSSTDKRKATQTRSFERRESNTTRYGEHDSGHDT  2136

Range 3: 1825 to 2136 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
237.0 bits(511) 0.0 104/104(100%) 0/104(0%) Minus/Minus
Query        2  CIMATIMFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKLILPCPLVLINSVTSDVKATTSSCSDGPTPSVGAGATGLGANNVASSM  313
                CIMATIMFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKLILPCPLVLINSVTSDVKATTSSCSDGPTPSVGAGATGLGANNVASSM
Subject   1825  CIMATIMFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKLILPCPLVLINSVTSDVKATTSSCSDGPTPSVGAGATGLGANNVASSM  2136

Range 4: 1826 to 2134 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
234.2 bits(510) 0.0 103/103(100%) 0/103(0%) Plus/Plus
Query        3  IDDATLLAPSPVAPAPTEGVGPSEQLDVVALTSDVTELINTRGQGKISFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMI  311
                IDDATLLAPSPVAPAPTEGVGPSEQLDVVALTSDVTELINTRGQGKISFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMI
Subject   1826  IDDATLLAPSPVAPAPTEGVGPSEQLDVVALTSDVTELINTRGQGKISFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMI  2134

Range 5: 1890 to 2135 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
187.1 bits(402) 0.0 81/82(99%) 0/82(0%) Plus/Plus
Query       67  HQSN*T*WL*RLT*RN*STPGGRAR*VFPTQCCRSMKRISTTSGIYRLRKLYR*TQGYADSFFRKAGVKHHEIWGT**WP*Y  312
                HQSN*T*WL*RLT*RN*STPGGRAR*VFPTQC RSMKRISTTSGIYRLRKLYR*TQGYADSFFRKAGVKHHEIWGT**WP*Y
Subject   1890  HQSN*T*WL*RLT*RN*STPGGRAR*VFPTQCYRSMKRISTTSGIYRLRKLYR*TQGYADSFFRKAGVKHHEIWGT**WP*Y  2135

Range 6: 1896 to 2135 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
186.2 bits(400) 0.0 79/80(99%) 0/80(0%) Minus/Minus
Query       73  VSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH*STTLSRENLSCPAPWC*SIPLRQTLKPLRLVA  312
                VSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH*S TLSRENLSCPAPWC*SIPLRQTLKPLRLVA
Subject   1896  VSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH*SITLSRENLSCPAPWC*SIPLRQTLKPLRLVA  2135

Grapevine leafroll associated virus 3 isolate 3 5 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130284.1 Length: 4711 Number of Matches: 6

Range 1: 1826 to 2134 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
254.0 bits(548) 0.0 102/103(99%) 0/103(0%) Minus/Minus
Query        3  YHGHYHVPHISWCLTPAFRKNESA*PCVYL*SFRNR*IPLVVDIRFIDRQH*VGKTYLALPPGVDQFRYVRR*SHYV*LL*WTYTFRRRWCYWTWR*QRRIVD  311
                YHGHYHVPHISWCLTPAFRKNESA*PCVYL*SFRNR*IPLVVDIRFIDR H*VGKTYLALPPGVDQFRYVRR*SHYV*LL*WTYTFRRRWCYWTWR*QRRIVD
Subject   1826  YHGHYHVPHISWCLTPAFRKNESA*PCVYL*SFRNR*IPLVVDIRFIDR*H*VGKTYLALPPGVDQFRYVRR*SHYV*LL*WTYTFRRRWCYWTWR*QRRIVD  2134

Range 2: 1825 to 2136 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
246.7 bits(532) 0.0 103/104(99%) 0/104(0%) Plus/Plus
Query        2  HRRCDVVSAKSSSTSAYGRCRSIRATRRSGFNV*RNGIDQHQGAGQDKFSRLSVVDQ*SGYLRRAVFTDYGSSTDKRKATQTRSFERRESNTTRYGEHDSGHDT  313
                HRRCDVVSAKSSSTSAYGRCRSIRATRRSGFNV*RNGIDQHQGAGQDKFSRLSV+DQ*SGYLRRAVFTDYGSSTDKRKATQTRSFERRESNTTRYGEHDSGHDT
Subject   1825  HRRCDVVSAKSSSTSAYGRCRSIRATRRSGFNV*RNGIDQHQGAGQDKFSRLSVIDQ*SGYLRRAVFTDYGSSTDKRKATQTRSFERRESNTTRYGEHDSGHDT  2136

Range 3: 1825 to 2136 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
237.0 bits(511) 0.0 104/104(100%) 0/104(0%) Minus/Minus
Query        2  CIMATIMFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKLILPCPLVLINSVTSDVKATTSSCSDGPTPSVGAGATGLGANNVASSM  313
                CIMATIMFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKLILPCPLVLINSVTSDVKATTSSCSDGPTPSVGAGATGLGANNVASSM
Subject   1825  CIMATIMFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKLILPCPLVLINSVTSDVKATTSSCSDGPTPSVGAGATGLGANNVASSM  2136

Range 4: 1826 to 2134 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
234.2 bits(510) 0.0 103/103(100%) 0/103(0%) Plus/Plus
Query        3  IDDATLLAPSPVAPAPTEGVGPSEQLDVVALTSDVTELINTRGQGKISFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMI  311
                IDDATLLAPSPVAPAPTEGVGPSEQLDVVALTSDVTELINTRGQGKISFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMI
Subject   1826  IDDATLLAPSPVAPAPTEGVGPSEQLDVVALTSDVTELINTRGQGKISFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMI  2134

Range 5: 1890 to 2135 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
187.1 bits(402) 0.0 81/82(99%) 0/82(0%) Plus/Plus
Query       67  HQSN*T*WL*RLT*RN*STPGGRAR*VFPTQCCRSMKRISTTSGIYRLRKLYR*TQGYADSFFRKAGVKHHEIWGT**WP*Y  312
                HQSN*T*WL*RLT*RN*STPGGRAR*VFPTQC RSMKRISTTSGIYRLRKLYR*TQGYADSFFRKAGVKHHEIWGT**WP*Y
Subject   1890  HQSN*T*WL*RLT*RN*STPGGRAR*VFPTQCYRSMKRISTTSGIYRLRKLYR*TQGYADSFFRKAGVKHHEIWGT**WP*Y  2135

Range 6: 1896 to 2135 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
186.2 bits(400) 0.0 79/80(99%) 0/80(0%) Minus/Minus
Query       73  VSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH*STTLSRENLSCPAPWC*SIPLRQTLKPLRLVA  312
                VSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH*S TLSRENLSCPAPWC*SIPLRQTLKPLRLVA
Subject   1896  VSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH*SITLSRENLSCPAPWC*SIPLRQTLKPLRLVA  2135

Grapevine leafroll associated virus 3 isolate 3 7 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130285.1 Length: 4711 Number of Matches: 6

Range 1: 1826 to 2134 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
254.0 bits(548) 0.0 102/103(99%) 0/103(0%) Minus/Minus
Query        3  YHGHYHVPHISWCLTPAFRKNESA*PCVYL*SFRNR*IPLVVDIRFIDRQH*VGKTYLALPPGVDQFRYVRR*SHYV*LL*WTYTFRRRWCYWTWR*QRRIVD  311
                YHGHYHVPHISWCLTPAFRKNESA*PCVYL*SFRNR*IPLVVDIRFIDR H*VGKTYLALPPGVDQFRYVRR*SHYV*LL*WTYTFRRRWCYWTWR*QRRIVD
Subject   1826  YHGHYHVPHISWCLTPAFRKNESA*PCVYL*SFRNR*IPLVVDIRFIDR*H*VGKTYLALPPGVDQFRYVRR*SHYV*LL*WTYTFRRRWCYWTWR*QRRIVD  2134

Range 2: 1825 to 2136 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
246.7 bits(532) 0.0 103/104(99%) 0/104(0%) Plus/Plus
Query        2  HRRCDVVSAKSSSTSAYGRCRSIRATRRSGFNV*RNGIDQHQGAGQDKFSRLSVVDQ*SGYLRRAVFTDYGSSTDKRKATQTRSFERRESNTTRYGEHDSGHDT  313
                HRRCDVVSAKSSSTSAYGRCRSIRATRRSGFNV*RNGIDQHQGAGQDKFSRLSV+DQ*SGYLRRAVFTDYGSSTDKRKATQTRSFERRESNTTRYGEHDSGHDT
Subject   1825  HRRCDVVSAKSSSTSAYGRCRSIRATRRSGFNV*RNGIDQHQGAGQDKFSRLSVIDQ*SGYLRRAVFTDYGSSTDKRKATQTRSFERRESNTTRYGEHDSGHDT  2136

Range 3: 1825 to 2136 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
237.0 bits(511) 0.0 104/104(100%) 0/104(0%) Minus/Minus
Query        2  CIMATIMFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKLILPCPLVLINSVTSDVKATTSSCSDGPTPSVGAGATGLGANNVASSM  313
                CIMATIMFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKLILPCPLVLINSVTSDVKATTSSCSDGPTPSVGAGATGLGANNVASSM
Subject   1825  CIMATIMFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKLILPCPLVLINSVTSDVKATTSSCSDGPTPSVGAGATGLGANNVASSM  2136

Range 4: 1826 to 2134 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
234.2 bits(510) 0.0 103/103(100%) 0/103(0%) Plus/Plus
Query        3  IDDATLLAPSPVAPAPTEGVGPSEQLDVVALTSDVTELINTRGQGKISFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMI  311
                IDDATLLAPSPVAPAPTEGVGPSEQLDVVALTSDVTELINTRGQGKISFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMI
Subject   1826  IDDATLLAPSPVAPAPTEGVGPSEQLDVVALTSDVTELINTRGQGKISFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMI  2134

Range 5: 1890 to 2135 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
187.1 bits(402) 0.0 81/82(99%) 0/82(0%) Plus/Plus
Query       67  HQSN*T*WL*RLT*RN*STPGGRAR*VFPTQCCRSMKRISTTSGIYRLRKLYR*TQGYADSFFRKAGVKHHEIWGT**WP*Y  312
                HQSN*T*WL*RLT*RN*STPGGRAR*VFPTQC RSMKRISTTSGIYRLRKLYR*TQGYADSFFRKAGVKHHEIWGT**WP*Y
Subject   1890  HQSN*T*WL*RLT*RN*STPGGRAR*VFPTQCYRSMKRISTTSGIYRLRKLYR*TQGYADSFFRKAGVKHHEIWGT**WP*Y  2135

Range 6: 1896 to 2135 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
186.2 bits(400) 0.0 79/80(99%) 0/80(0%) Minus/Minus
Query       73  VSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH*STTLSRENLSCPAPWC*SIPLRQTLKPLRLVA  312
                VSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH*S TLSRENLSCPAPWC*SIPLRQTLKPLRLVA
Subject   1896  VSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH*SITLSRENLSCPAPWC*SIPLRQTLKPLRLVA  2135

Grapevine leafroll associated virus 3 isolate 3 8 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130286.1 Length: 4711 Number of Matches: 6

Range 1: 1826 to 2134 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
254.0 bits(548) 0.0 102/103(99%) 0/103(0%) Minus/Minus
Query        3  YHGHYHVPHISWCLTPAFRKNESA*PCVYL*SFRNR*IPLVVDIRFIDRQH*VGKTYLALPPGVDQFRYVRR*SHYV*LL*WTYTFRRRWCYWTWR*QRRIVD  311
                YHGHYHVPHISWCLTPAFRKNESA*PCVYL*SFRNR*IPLVVDIRFIDR H*VGKTYLALPPGVDQFRYVRR*SHYV*LL*WTYTFRRRWCYWTWR*QRRIVD
Subject   1826  YHGHYHVPHISWCLTPAFRKNESA*PCVYL*SFRNR*IPLVVDIRFIDR*H*VGKTYLALPPGVDQFRYVRR*SHYV*LL*WTYTFRRRWCYWTWR*QRRIVD  2134

Range 2: 1825 to 2136 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
246.7 bits(532) 0.0 103/104(99%) 0/104(0%) Plus/Plus
Query        2  HRRCDVVSAKSSSTSAYGRCRSIRATRRSGFNV*RNGIDQHQGAGQDKFSRLSVVDQ*SGYLRRAVFTDYGSSTDKRKATQTRSFERRESNTTRYGEHDSGHDT  313
                HRRCDVVSAKSSSTSAYGRCRSIRATRRSGFNV*RNGIDQHQGAGQDKFSRLSV+DQ*SGYLRRAVFTDYGSSTDKRKATQTRSFERRESNTTRYGEHDSGHDT
Subject   1825  HRRCDVVSAKSSSTSAYGRCRSIRATRRSGFNV*RNGIDQHQGAGQDKFSRLSVIDQ*SGYLRRAVFTDYGSSTDKRKATQTRSFERRESNTTRYGEHDSGHDT  2136

Range 3: 1825 to 2136 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
237.0 bits(511) 0.0 104/104(100%) 0/104(0%) Minus/Minus
Query        2  CIMATIMFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKLILPCPLVLINSVTSDVKATTSSCSDGPTPSVGAGATGLGANNVASSM  313
                CIMATIMFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKLILPCPLVLINSVTSDVKATTSSCSDGPTPSVGAGATGLGANNVASSM
Subject   1825  CIMATIMFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKLILPCPLVLINSVTSDVKATTSSCSDGPTPSVGAGATGLGANNVASSM  2136

Range 4: 1826 to 2134 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
234.2 bits(510) 0.0 103/103(100%) 0/103(0%) Plus/Plus
Query        3  IDDATLLAPSPVAPAPTEGVGPSEQLDVVALTSDVTELINTRGQGKISFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMI  311
                IDDATLLAPSPVAPAPTEGVGPSEQLDVVALTSDVTELINTRGQGKISFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMI
Subject   1826  IDDATLLAPSPVAPAPTEGVGPSEQLDVVALTSDVTELINTRGQGKISFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMI  2134

Range 5: 1890 to 2135 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
187.1 bits(402) 0.0 81/82(99%) 0/82(0%) Plus/Plus
Query       67  HQSN*T*WL*RLT*RN*STPGGRAR*VFPTQCCRSMKRISTTSGIYRLRKLYR*TQGYADSFFRKAGVKHHEIWGT**WP*Y  312
                HQSN*T*WL*RLT*RN*STPGGRAR*VFPTQC RSMKRISTTSGIYRLRKLYR*TQGYADSFFRKAGVKHHEIWGT**WP*Y
Subject   1890  HQSN*T*WL*RLT*RN*STPGGRAR*VFPTQCYRSMKRISTTSGIYRLRKLYR*TQGYADSFFRKAGVKHHEIWGT**WP*Y  2135

Range 6: 1896 to 2135 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
186.2 bits(400) 0.0 79/80(99%) 0/80(0%) Minus/Minus
Query       73  VSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH*STTLSRENLSCPAPWC*SIPLRQTLKPLRLVA  312
                VSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH*S TLSRENLSCPAPWC*SIPLRQTLKPLRLVA
Subject   1896  VSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH*SITLSRENLSCPAPWC*SIPLRQTLKPLRLVA  2135

Grapevine leafroll associated virus 3 isolate 3 12 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130287.1 Length: 4711 Number of Matches: 6

Range 1: 1826 to 2134 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
254.0 bits(548) 0.0 102/103(99%) 0/103(0%) Minus/Minus
Query        3  YHGHYHVPHISWCLTPAFRKNESA*PCVYL*SFRNR*IPLVVDIRFIDRQH*VGKTYLALPPGVDQFRYVRR*SHYV*LL*WTYTFRRRWCYWTWR*QRRIVD  311
                YHGHYHVPHISWCLTPAFRKNESA*PCVYL*SFRNR*IPLVVDIRFIDR H*VGKTYLALPPGVDQFRYVRR*SHYV*LL*WTYTFRRRWCYWTWR*QRRIVD
Subject   1826  YHGHYHVPHISWCLTPAFRKNESA*PCVYL*SFRNR*IPLVVDIRFIDR*H*VGKTYLALPPGVDQFRYVRR*SHYV*LL*WTYTFRRRWCYWTWR*QRRIVD  2134

Range 2: 1825 to 2136 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
246.7 bits(532) 0.0 103/104(99%) 0/104(0%) Plus/Plus
Query        2  HRRCDVVSAKSSSTSAYGRCRSIRATRRSGFNV*RNGIDQHQGAGQDKFSRLSVVDQ*SGYLRRAVFTDYGSSTDKRKATQTRSFERRESNTTRYGEHDSGHDT  313
                HRRCDVVSAKSSSTSAYGRCRSIRATRRSGFNV*RNGIDQHQGAGQDKFSRLSV+DQ*SGYLRRAVFTDYGSSTDKRKATQTRSFERRESNTTRYGEHDSGHDT
Subject   1825  HRRCDVVSAKSSSTSAYGRCRSIRATRRSGFNV*RNGIDQHQGAGQDKFSRLSVIDQ*SGYLRRAVFTDYGSSTDKRKATQTRSFERRESNTTRYGEHDSGHDT  2136

Range 3: 1825 to 2136 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
237.0 bits(511) 0.0 104/104(100%) 0/104(0%) Minus/Minus
Query        2  CIMATIMFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKLILPCPLVLINSVTSDVKATTSSCSDGPTPSVGAGATGLGANNVASSM  313
                CIMATIMFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKLILPCPLVLINSVTSDVKATTSSCSDGPTPSVGAGATGLGANNVASSM
Subject   1825  CIMATIMFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKLILPCPLVLINSVTSDVKATTSSCSDGPTPSVGAGATGLGANNVASSM  2136

Range 4: 1826 to 2134 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
234.2 bits(510) 0.0 103/103(100%) 0/103(0%) Plus/Plus
Query        3  IDDATLLAPSPVAPAPTEGVGPSEQLDVVALTSDVTELINTRGQGKISFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMI  311
                IDDATLLAPSPVAPAPTEGVGPSEQLDVVALTSDVTELINTRGQGKISFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMI
Subject   1826  IDDATLLAPSPVAPAPTEGVGPSEQLDVVALTSDVTELINTRGQGKISFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMI  2134

Range 5: 1890 to 2135 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
187.1 bits(402) 0.0 81/82(99%) 0/82(0%) Plus/Plus
Query       67  HQSN*T*WL*RLT*RN*STPGGRAR*VFPTQCCRSMKRISTTSGIYRLRKLYR*TQGYADSFFRKAGVKHHEIWGT**WP*Y  312
                HQSN*T*WL*RLT*RN*STPGGRAR*VFPTQC RSMKRISTTSGIYRLRKLYR*TQGYADSFFRKAGVKHHEIWGT**WP*Y
Subject   1890  HQSN*T*WL*RLT*RN*STPGGRAR*VFPTQCYRSMKRISTTSGIYRLRKLYR*TQGYADSFFRKAGVKHHEIWGT**WP*Y  2135

Range 6: 1896 to 2135 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
186.2 bits(400) 0.0 79/80(99%) 0/80(0%) Minus/Minus
Query       73  VSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH*STTLSRENLSCPAPWC*SIPLRQTLKPLRLVA  312
                VSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH*S TLSRENLSCPAPWC*SIPLRQTLKPLRLVA
Subject   1896  VSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH*SITLSRENLSCPAPWC*SIPLRQTLKPLRLVA  2135

Nucleotide Sequence (645 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
65
130
195
260
325
390
455
520
585
645

Descriptions

Alignments

Grapevine leafroll associated virus 3 isolate GH24, complete genome

Sequence ID: KM058745.1 Length: 18493 Number of Matches: 8

Range 1: 17252 to 17896 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
506.0 bits(1098) 0.0 214/215(100%) 0/215(0%) Plus/Minus
Query        1  HPRDPTVGQEPISADEEIRVQFSRIFYCLQTR*CY*KMVLVTEIA*APLVFSGTSW*VAHFIHLHLFNHS*NAIGMPH*ASSYVCYATDVVVLER*VNTLNDYFFVHLFGDETIDERLYRIHFIQWVDNHTVPYRIAYVLKGVGQDVNR**IVTIYGGKNLHNYK*NIHFHLLEQRR*EIFNHVPLRYSRFASQGQSVASTLASRLTYQQIPNFR  645
                HPRDPTVGQEPISADEEIRVQFSRIFYCLQTR*CY*KMVLVTEIA*APLVFSGTSW*VAHFIHLHLFNHS*NAIGMPH*ASSYVCYATDVVVLER*VNTLNDYFFVHLFGDETIDERLYRIHFIQWVDNHTVPYRIAYVLKGVGQDVNR**IVTIYGGKNLHNY+*NIHFHLLEQRR*EIFNHVPLRYSRFASQGQSVASTLASRLTYQQIPNFR
Subject  17252  HPRDPTVGQEPISADEEIRVQFSRIFYCLQTR*CY*KMVLVTEIA*APLVFSGTSW*VAHFIHLHLFNHS*NAIGMPH*ASSYVCYATDVVVLER*VNTLNDYFFVHLFGDETIDERLYRIHFIQWVDNHTVPYRIAYVLKGVGQDVNR**IVTIYGGKNLHNYR*NIHFHLLEQRR*EIFNHVPLRYSRFASQGQSVASTLASRLTYQQIPNFR  17896

Range 2: 17254 to 17895 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
486.8 bits(1056) 0.0 209/214(98%) 0/214(0%) Plus/Minus
Query        2  ILAIPQLVKNPLVLMKKFAFNSPESSTACKPADVIKRWFWLQRSLKRLWYFLEPLGESHTSYISISLITAKTLSACPTKHPAMCVMQPTWSYSNAESIL*TIISLYICLVTKLLTNAFIVFTSFNGSTTTPSPIVSLTFLKALDKM*IADRSLLYMAERICIIINETSISTY*NKEGKRYSITFPCATLGSQVRVKAWLALLPLDSPINKYLTF  643
                ILAIPQLVKNPLVL KKFAFNSPESSTACKPADVIKRWFWLQRSLKRLWYFLEPLGE HTSYISISLITAKTLSAC TKH AMCVMQPTWSYSNAESIL*TIISLYICLVTKLLTNAFIVFTSFNGSTTTPSPIVSLTFLKALDKM*IADRSLLYMAERICIII+ETSISTY*NKEGKRYSITFPCATLGSQVRVKAWLALLPLDSPINKYLTF
Subject  17254  ILAIPQLVKNPLVLTKKFAFNSPESSTACKPADVIKRWFWLQRSLKRLWYFLEPLGELHTSYISISLITAKTLSACRTKHLAMCVMQPTWSYSNAESIL*TIISLYICLVTKLLTNAFIVFTSFNGSTTTPSPIVSLTFLKALDKM*IADRSLLYMAERICIIIDETSISTY*NKEGKRYSITFPCATLGSQVRVKAWLALLPLDSPINKYLTF  17895

Range 3: 17252 to 17896 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
484.9 bits(1052) 0.0 210/215(98%) 0/215(0%) Minus/Plus
Query        1  AKVRYLLIGESRGKSASHALTLTCEPRVAQGNVIEYLLPSLF**VEMDVSFIIMQILSAIYSNDLSAIYILSNAFKNVSDTIGDGVVVDPLNEVNTIKAFVNSFVTKQMYKEIIVQSIDSAFEYDHVGCITHIAGCLVGHADSVLAVIKEMEMYEVCDSPRGSRKYQRRLSDLCNQNHLLITSAGLQAVEDSGELNANFFISTNGFLTNCGIARM  645
                AKVRYLLIGESRGKSASHALTLTCEPRVAQGNVIEYLLPSLF**VEMDVS IIMQILSAIYSNDLSAIYILSNAFKNVSDTIGDGVVVDPLNEVNTIKAFVNSFVTKQMYKEIIVQSIDSAFEYDHVGCITHIA CLV HADSVLAVIKEMEMYEVC+SPRGSRKYQRRLSDLCNQNHLLITSAGLQAVEDSGELNANFF+STNGFLTNCGIARM
Subject  17252  AKVRYLLIGESRGKSASHALTLTCEPRVAQGNVIEYLLPSLF**VEMDVSSIIMQILSAIYSNDLSAIYILSNAFKNVSDTIGDGVVVDPLNEVNTIKAFVNSFVTKQMYKEIIVQSIDSAFEYDHVGCITHIARCLVRHADSVLAVIKEMEMYEVCNSPRGSRKYQRRLSDLCNQNHLLITSAGLQAVEDSGELNANFFVSTNGFLTNCGIARM  17896

Range 4: 17254 to 17895 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
480.8 bits(1043) 0.0 210/214(98%) 0/214(0%) Minus/Plus
Query        2  ES*VFVDR*V*RQEC*PRFDPDLRTESSARERD*ISLTFFVLVSGNGCFIYNYANSFRHI**RSISDLHLVQRL*ERKRYDRGRCGCRPIE*SEYDKGVRQ*FRHQTNVQRNNRSEY*LSVRVRPRRLHNTHSWMLSGACR*RFSCD*RDGDV*SVRLTKRFQKIPKALKRSL*PKPSFNNISGFASSRRFGRIEREFLHQH*WVLDQLWDRED  643
                ES*VFVDR*V*RQEC*PRFDPDLRTESSARERD*ISLTFFVLVSGNGCFIYNYANSFRHI**RSISDLHLVQRL*ERKRYDRGRCGCRPIE*SEYDKGVRQ*FRHQTNVQRNNRSEY*LSVRVRPRRLHNTHS MLS ACR*RFSCD*RDGDV*SV+LTKRFQKIPKALKRSL*PKPSFNNISGFASSRRFGRIEREFL QH*WVLDQLWDRED
Subject  17254  ES*VFVDR*V*RQEC*PRFDPDLRTESSARERD*ISLTFFVLVSGNGCFIYNYANSFRHI**RSISDLHLVQRL*ERKRYDRGRCGCRPIE*SEYDKGVRQ*FRHQTNVQRNNRSEY*LSVRVRPRRLHNTHS*MLSAACR*RFSCD*RDGDV*SVQLTKRFQKIPKALKRSL*PKPSFNNISGFASSRRFGRIEREFLRQH*WVLDQLWDRED  17895

Range 5: 17568 to 17894 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
220.5 bits(475) 0.0 108/109(99%) 0/109(0%) Minus/Plus
Query        3  PNKCTKK*SFRVLTQRXXXXXSVA*HT*LDA*WGMPIAF*L*LKRWRCMKCATHQEVPENTKGA*AISVTKTIF**HQRVCKQ*KIREN*TRISSSALMGS*PTVGSRG  329
                PNKCTKK*SFRVLTQRSSTTTSVA*HT*LDA* GMPIAF*L*LKRWRCMKCATHQEVPENTKGA*AISVTKTIF**HQRVCKQ*KIREN*TRISSSALMGS*PTVGSRG
Subject  17568  PNKCTKK*SFRVLTQRSSTTTSVA*HT*LDA*CGMPIAF*L*LKRWRCMKCATHQEVPENTKGA*AISVTKTIF**HQRVCKQ*KIREN*TRISSSALMGS*PTVGSRG  17894

Range 6: 17253 to 17531 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
213.2 bits(459) 0.0 93/93(100%) 0/93(0%) Minus/Plus
Query      366  RKLGIC**VSLEARVLATL*P*LANRE*RKGT*LNISYLLCSSKWKWMFHL*LCKFFPPYIVTIYQRFTSCPTPLRT*AIR*GTVWLSTH*MK  644
                RKLGIC**VSLEARVLATL*P*LANRE*RKGT*LNISYLLCSSKWKWMFHL*LCKFFPPYIVTIYQRFTSCPTPLRT*AIR*GTVWLSTH*MK
Subject  17253  RKLGIC**VSLEARVLATL*P*LANRE*RKGT*LNISYLLCSSKWKWMFHL*LCKFFPPYIVTIYQRFTSCPTPLRT*AIR*GTVWLSTH*MK  17531

Range 7: 17505 to 17858 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
229.7 bits(495) 0.0 114/118(97%) 0/118(0%) Plus/Minus
Query       39  C**RNSRSIXXXXXXXXXXXXXXKDGFGYRDRLSAFGIFWNLLVSRTLHTSPSL*SQLKRYRHAPLSIQLCVLCNRRGRTRTLSQYSERLFLCTFVW*RNY*RTPLSYSLHSMGRQPH  392
                C* RNSRSILPNLLLLANPLMLLKDGFGYRDRLSAFGIFWNLLVS TLHTSPSL*SQLKRYRHA LSI LCVLCNRRGRTRTLSQYSERLFLCTFVW*RNY*RTPLSYSLHSMGRQPH
Subject  17505  C*RRNSRSILPNLLLLANPLMLLKDGFGYRDRLSAFGIFWNLLVSCTLHTSPSL*SQLKRYRHAALSI*LCVLCNRRGRTRTLSQYSERLFLCTFVW*RNY*RTPLSYSLHSMGRQPH  17858

Range 8: 17295 to 17459 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.4 bits(274) 0.0 55/55(100%) 0/55(0%) Plus/Minus
Query      438  CKSLIDRYYIWRKEFA*L*MKHPFPLTRTKKVRDIQSRSLALLSVRKSGSKRG*H  602
                CKSLIDRYYIWRKEFA*L*MKHPFPLTRTKKVRDIQSRSLALLSVRKSGSKRG*H
Subject  17295  CKSLIDRYYIWRKEFA*L*MKHPFPLTRTKKVRDIQSRSLALLSVRKSGSKRG*H  17459

Grapevine leafroll associated virus 3 isolate NZ1 B polyprotein and RNA dependent RNA polymerase genes, partial cds; and 5 kDa protein, HSP70 like protein, HSP90 like protein, coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: JX220900.2 Length: 11827 Number of Matches: 5

Range 1: 10607 to 11251 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
267.3 bits(577) 0.0 104/215(48%) 0/215(0%) Minus/Plus
Query        1  AKVRYLLIGESRGKSASHALTLTCEPRVAQGNVIEYLLPSLF**VEMDVSFIIMQILSAIYSNDLSAIYILSNAFKNVSDTIGDGVVVDPLNEVNTIKAFVNSFVTKQMYKEIIVQSIDSAFEYDHVGCITHIAGCLVGHADSVLAVIKEMEMYEVCDSPRGSRKYQRRLSDLCNQNHLLITSAGLQAVEDSGELNANFFISTNGFLTNCGIARM  645
                AKV Y LIG SRGK +  +L L CE   + G +++Y++ S   *+ MD SFII+QILSA+Y+NDLSA+Y+L N++KN+ DT+G+G + DP  ++N +K++V S  T +++K I+ QSID +  YD VGC+  +A  L  H+++VL +IKEME++EVC+  R S++Y + LSDLC+  H++IT AGL A+E++  L  ++F+S NG++TNCG+ARM
Subject  10607  AKVGYTLIGVSRGKDSGRSLKLHCEENTSNGGLLQYIIASSLG*IAMDFSFIIVQILSALYNNDLSALYLLINSYKNIVDTVGEGGLDDPQAQINALKSYVASCSTTELHKSILTQSIDLSANYDAVGCLISLARNLTKHSEAVLEIIKEMELFEVCNGKRASKRYLKHLSDLCSNKHMIITQAGLTAIEEADLLRTHYFVSENGYVTNCGLARM  11251

Range 2: 10609 to 11250 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
133.0 bits(284) 0.0 91/214(43%) 0/214(0%) Plus/Minus
Query        2  ILAIPQLVKNPLVLMKKFAFNSPESSTACKPADVIKRWFWLQRSLKRLWYFLEPLGESHTSYISISLITAKTLSACPTKHPAMCVMQPTWSYSNAESIL*TIISLYICLVTKLLTNAFIVFTSFNGSTTTPSPIVSLTFLKALDKM*IADRSLLYMAERICIIINETSISTY*NKEGKRYSITFPCATLGSQVRVKAWLALLPLDSPINKYLTF  643
                ILA PQLV  P  L K    +   SS A  PA VI      QRSLK L Y L  L   HTS  SISL+ +KT S C  +  A  +  PT S    +S+L   I L   +V    T  F  F    GS+  PSP VS  FL  L K   ADRSLLY AE IC +INE SI+    +E   Y    P     SQ   K     LP D+PIN Y TF
Subject  10609  ILASPQLVTYPFSLTK*CVRSRSASSMAVSPA*VIIMCLLEQRSLKCLRYLLLALFPLHTSNNSISLMISKTASECFVRFLAKLIKHPTAS*LADKSMLWVKIDLCSSVVEHEATYDFKAFICACGSSNPPSPTVSTMFL*LLIKRYSADRSLLYKAESICTMINEKSIAI*PREEAIIYCSKPPFEVFSSQCNFKERPLSLPRDTPINVYPTF  11250

Range 3: 10607 to 10903 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.0 bits(118) 0.0 36/99(36%) 0/99(0%) Plus/Minus
Query      349  RLYRIHFIQWVDNHTVPYRIAYVLKGVGQDVNR**IVTIYGGKNLHNYK*NIHFHLLEQRR*EIFNHVPLRYSRFASQGQSVASTLASRLTYQQIPNFR  645
                RL  ++   WV     P R+  VL  +  ++ R**IV +  GK LH+ K  IH  L  +R   I    P+    FA Q Q  ++ L SR +  +IPNFR
Subject  10607  RL*SVYLRLWVV*PPFPNRVDDVLITIN*EIQR**IVVVQSGKYLHDDKRKIHSDLT*RRSDNILQ*TPV*SILFAVQLQGASAILTSRYSN*RIPNFR  10903

Range 4: 10608 to 10877 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.2 bits(101) 0.0 36/90(40%) 0/90(0%) Minus/Plus
Query      375  RKLGIC**VSLEARVLATL*P*LANRE*RKGT*LNISYLLCSSKWKWMFHL*LCKFFPPYIVTIYQRFTSCPTPLRT*AIR*GTVWLSTH  644
                RKLGI *   LE R+    *   A R  + G   +I  LL   K  W+F L  CK+FP    TIYQR  S    +RT + R G    +TH
Subject  10608  RKLGIR*LEYLEVRIADAP*SCTAKRILQTGVYCSILSLLL*VKSLWIFRLSSCKYFPLCTTTIYQRCIS*LIVIRTSSTRLGKGG*TTH  10877

Range 5: 11037 to 11090 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.6 bits(56) 0.0 10/18(56%) 0/18(0%) Minus/Plus
Query      162  F*L*LKRWRCMKCATHQE  215
                F*  LKRW C +C T +E
Subject  11037  F*KSLKRWNCSRCVTEKE  11090

Grapevine leafroll associated virus 3 isolate 7 110 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130309.1 Length: 4711 Number of Matches: 3

Range 1: 3521 to 4165 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
265.5 bits(573) 0.0 110/215(51%) 0/215(0%) Minus/Plus
Query        1  AKVRYLLIGESRGKSASHALTLTCEPRVAQGNVIEYLLPSLF**VEMDVSFIIMQILSAIYSNDLSAIYILSNAFKNVSDTIGDGVVVDPLNEVNTIKAFVNSFVTKQMYKEIIVQSIDSAFEYDHVGCITHIAGCLVGHADSVLAVIKEMEMYEVCDSPRGSRKYQRRLSDLCNQNHLLITSAGLQAVEDSGELNANFFISTNGFLTNCGIARM  645
                AKVRY+L GE RG     +L L C  R   GNV+++LL S   *  MD+SFII+QILSA+Y+ND +A+YIL NA+K+V+DT+G+  + +P  EV+ +KA+V +  T +++K I++ SIDSAF YD +GC+  IA  LV H+++VL +IK ME++EVC   RGSRKY   LSD C+  H+++T AGL AV+++  L  N+ +STNGF++NCGIARM
Subject   3521  AKVRYILSGERRGLKCVDSLELVCIGREGSGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDATALYILINAYKSVADTVGETAIGNPQAEVDVVKAYVTTTATTELHKTILIDSIDSAFAYDGIGCLVGIARGLVKHSENVLEIIKSMELFEVCRGKRGSRKYLGCLSDYCSSKHMMLTQAGLAAVDEADVLRTNYLVSTNGFVSNCGIARM  4165

Range 2: 3523 to 4164 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
138.1 bits(295) 0.0 93/214(43%) 0/214(0%) Plus/Minus
Query        2  ILAIPQLVKNPLVLMKKFAFNSPESSTACKPADVIKRWFWLQRSLKRLWYFLEPLGESHTSYISISLITAKTLSACPTKHPAMCVMQPTWSYSNAESIL*TIISLYICLVTKLLTNAFIVFTSFNGSTTTPSPIVSLTFLKALDKM*IADRSLLYMAERICIIINETSISTY*NKEGKRYSITFPCATLGSQVRVKAWLALLPLDSPINKYLTF  643
                ILAIPQ   NPLVL + F  ++  SSTA  PA V       Q SLK   YFL PL   HTS  SI  + ++T S C TK  AM    P  S + AESIL   I L   +V  ++T AF   TS  G     SP VS T L AL ++  A  SLLY AERIC IIN+ SI      E  +   TFP  +L  Q   K      P  SP   YLTF
Subject   3523  ILAIPQFETNPLVLTR*FVRSTSASSTAANPA*VSIMCLLEQ*SLKHPRYFLLPLFPRHTSNNSIDFMISRTFSECLTKPLAMPTKHPIPS*AKAESILSIRIVLCSSVVAVVVT*AFTTSTSACGLPIAVSPTVSATLLYALIRIYSAVASLLYKAERICTIINDRSIIL*PRDEISKCCSTFPLPSLPIQTSSKESTHFNPRLSPDKIYLTF  4164

Range 3: 3521 to 4036 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.1 bits(127) 0.0 50/172(29%) 0/172(0%) Plus/Minus
Query      130  IA*APLVFSGTSW*VAHFIHLHLFNHS*NAIGMPH*ASSYVCYATDVVVLER*VNTLNDYFFVHLFGDETIDERLYRIHFIQWVDNHTVPYRIAYVLKGVGQDVNR**IVTIYGGKNLHNYK*NIHFHLLEQRR*EIFNHVPLRYSRFASQGQSVASTLASRLTYQQIPNFR  645
                IA* P +FS +     HF  LH      N   M +*  SY       V+ E  V T+N    + L    +    L+ I+   W+    + Y I+     V QD+ R  ++ + G K+LH+ K* +H+ L  +  * +  +V   +S + +Q   V +   S L    IPNFR
Subject   3521  IA*TPKIFSASPLSTTHFE*LH*LYDFQNIF*MFN*TPSYAH*TPYSVISEGGVYTVNKNRLMQLSRRSSSYVSLHNINLSLWIAYRCLAYCISNTFIRVNQDIQRCCVIIV*GRKDLHDNK**VHYTLT*R*D**VL*YVSTSFSTYTNQL*GVYTL*PSSLP**NIPNFR  4036

Grapevine leafroll associated virus 3 isolate 7 112 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130310.1 Length: 4711 Number of Matches: 4

Range 1: 3521 to 4165 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
264.1 bits(570) 0.0 109/215(51%) 0/215(0%) Minus/Plus
Query        1  AKVRYLLIGESRGKSASHALTLTCEPRVAQGNVIEYLLPSLF**VEMDVSFIIMQILSAIYSNDLSAIYILSNAFKNVSDTIGDGVVVDPLNEVNTIKAFVNSFVTKQMYKEIIVQSIDSAFEYDHVGCITHIAGCLVGHADSVLAVIKEMEMYEVCDSPRGSRKYQRRLSDLCNQNHLLITSAGLQAVEDSGELNANFFISTNGFLTNCGIARM  645
                AKVRY+L GE RG     +L L C  R   GNV+++LL S   *  MD+SFII+QILSA+Y+ND +A+YIL NA+K+V+DT+G+  + +P  EV+ +KA+V +  T ++++ I++ SIDSAF YD +GC+  IA  LV H+++VL +IK ME++EVC   RGSRKY   LSD C+  H+++T AGL AV+++  L  N+ +STNGF++NCGIARM
Subject   3521  AKVRYILSGERRGLKCVDSLELVCIGREGSGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDATALYILINAYKSVADTVGETAIGNPQAEVDVVKAYVTTTATTELHRTILIDSIDSAFAYDGIGCLVGIARGLVKHSENVLEIIKSMELFEVCRGKRGSRKYLGCLSDYCSSKHMMLTQAGLAAVDEADVLRTNYLVSTNGFVSNCGIARM  4165

Range 2: 3523 to 4164 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
138.1 bits(295) 0.0 93/214(43%) 0/214(0%) Plus/Minus
Query        2  ILAIPQLVKNPLVLMKKFAFNSPESSTACKPADVIKRWFWLQRSLKRLWYFLEPLGESHTSYISISLITAKTLSACPTKHPAMCVMQPTWSYSNAESIL*TIISLYICLVTKLLTNAFIVFTSFNGSTTTPSPIVSLTFLKALDKM*IADRSLLYMAERICIIINETSISTY*NKEGKRYSITFPCATLGSQVRVKAWLALLPLDSPINKYLTF  643
                ILAIPQ   NPLVL + F  ++  SSTA  PA V       Q SLK   YFL PL   HTS  SI  + ++T S C TK  AM    P  S + AESIL   I L   +V  ++T AF   TS  G     SP VS T L AL ++  A  SLLY AERIC IIN+ SI      E  +   TFP  +L  Q   K      P  SP   YLTF
Subject   3523  ILAIPQFETNPLVLTR*FVRSTSASSTAANPA*VSIMCLLEQ*SLKHPRYFLLPLFPRHTSNNSIDFMISRTFSECLTKPLAMPTKHPIPS*AKAESILSIRIVLCSSVVAVVVT*AFTTSTSACGLPIAVSPTVSATLLYALIRIYSAVASLLYKAERICTIINDRSIIL*PRDEISKCCSTFPLPSLPIQTSSKESTHFNPRLSPDKIYLTF  4164

Range 3: 3521 to 3814 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.4 bits(95) 0.0 29/98(30%) 0/98(0%) Plus/Minus
Query      352  LYRIHFIQWVDNHTVPYRIAYVLKGVGQDVNR**IVTIYGGKNLHNYK*NIHFHLLEQRR*EIFNHVPLRYSRFASQGQSVASTLASRLTYQQIPNFR  645
                L+ I+   W+    + Y I+     V QD+ R  ++ + G K+LH+ K* +H+ L  +  * +  +V   +S + +Q   V +   S L    IPNFR
Subject   3521  LHNINLSLWIAYRCLAYCISNTFIRVNQDIQRCCVIIV*GRKDLHDNK**VHYTLT*R*D**VL*YVSTSFSTYTNQL*GVYTL*PSSLP**NIPNFR  3814

Range 4: 3863 to 4036 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.0 bits(46) 0.0 20/58(34%) 0/58(0%) Plus/Minus
Query      130  IA*APLVFSGTSW*VAHFIHLHLFNHS*NAIGMPH*ASSYVCYATDVVVLER*VNTLN  303
                IA* P +FS +     HF  LH      N   M +*  SY       V+ E  V T+N
Subject   3863  IA*TPKIFSASPLSTTHFE*LH*LYDFQNIF*MFN*TPSYAH*TPYSVISEGGVYTVN  4036

Grapevine leafroll associated virus 3 isolate 7 123 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130311.1 Length: 4711 Number of Matches: 4

Range 1: 3521 to 4165 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
264.1 bits(570) 0.0 109/215(51%) 0/215(0%) Minus/Plus
Query        1  AKVRYLLIGESRGKSASHALTLTCEPRVAQGNVIEYLLPSLF**VEMDVSFIIMQILSAIYSNDLSAIYILSNAFKNVSDTIGDGVVVDPLNEVNTIKAFVNSFVTKQMYKEIIVQSIDSAFEYDHVGCITHIAGCLVGHADSVLAVIKEMEMYEVCDSPRGSRKYQRRLSDLCNQNHLLITSAGLQAVEDSGELNANFFISTNGFLTNCGIARM  645
                AKVRY+L GE RG     +L L C  R   GNV+++LL S   *  MD+SFII+QILSA+Y+ND +A+YIL NA+K+V+DT+G+  + +P  EV+ +KA+V +  T ++++ I++ SIDSAF YD +GC+  IA  LV H+++VL +IK ME++EVC   RGSRKY   LSD C+  H+++T AGL AV+++  L  N+ +STNGF++NCGIARM
Subject   3521  AKVRYILSGERRGLKCVDSLELVCIGREGSGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDATALYILINAYKSVADTVGETAIGNPQAEVDVVKAYVTTTATTELHRTILIDSIDSAFAYDGIGCLVGIARGLVKHSENVLEIIKSMELFEVCRGKRGSRKYLGCLSDYCSSKHMMLTQAGLAAVDEADVLRTNYLVSTNGFVSNCGIARM  4165

Range 2: 3523 to 4164 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
138.1 bits(295) 0.0 93/214(43%) 0/214(0%) Plus/Minus
Query        2  ILAIPQLVKNPLVLMKKFAFNSPESSTACKPADVIKRWFWLQRSLKRLWYFLEPLGESHTSYISISLITAKTLSACPTKHPAMCVMQPTWSYSNAESIL*TIISLYICLVTKLLTNAFIVFTSFNGSTTTPSPIVSLTFLKALDKM*IADRSLLYMAERICIIINETSISTY*NKEGKRYSITFPCATLGSQVRVKAWLALLPLDSPINKYLTF  643
                ILAIPQ   NPLVL + F  ++  SSTA  PA V       Q SLK   YFL PL   HTS  SI  + ++T S C TK  AM    P  S + AESIL   I L   +V  ++T AF   TS  G     SP VS T L AL ++  A  SLLY AERIC IIN+ SI      E  +   TFP  +L  Q   K      P  SP   YLTF
Subject   3523  ILAIPQFETNPLVLTR*FVRSTSASSTAANPA*VSIMCLLEQ*SLKHPRYFLLPLFPRHTSNNSIDFMISRTFSECLTKPLAMPTKHPIPS*AKAESILSIRIVLCSSVVAVVVT*AFTTSTSACGLPIAVSPTVSATLLYALIRIYSAVASLLYKAERICTIINDRSIIL*PRDEISKCCSTFPLPSLPIQTSSKESTHFNPRLSPDKIYLTF  4164

Range 3: 3521 to 3814 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.4 bits(95) 0.0 29/98(30%) 0/98(0%) Plus/Minus
Query      352  LYRIHFIQWVDNHTVPYRIAYVLKGVGQDVNR**IVTIYGGKNLHNYK*NIHFHLLEQRR*EIFNHVPLRYSRFASQGQSVASTLASRLTYQQIPNFR  645
                L+ I+   W+    + Y I+     V QD+ R  ++ + G K+LH+ K* +H+ L  +  * +  +V   +S + +Q   V +   S L    IPNFR
Subject   3521  LHNINLSLWIAYRCLAYCISNTFIRVNQDIQRCCVIIV*GRKDLHDNK**VHYTLT*R*D**VL*YVSTSFSTYTNQL*GVYTL*PSSLP**NIPNFR  3814

Range 4: 3863 to 4036 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.0 bits(46) 0.0 20/58(34%) 0/58(0%) Plus/Minus
Query      130  IA*APLVFSGTSW*VAHFIHLHLFNHS*NAIGMPH*ASSYVCYATDVVVLER*VNTLN  303
                IA* P +FS +     HF  LH      N   M +*  SY       V+ E  V T+N
Subject   3863  IA*TPKIFSASPLSTTHFE*LH*LYDFQNIF*MFN*TPSYAH*TPYSVISEGGVYTVN  4036

Nucleotide Sequence (417 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
42
84
126
168
210
252
294
336
378
417

Descriptions

Alignments

Grapevine leafroll associated virus 3 isolate GH24, complete genome

Sequence ID: KM058745.1 Length: 18493 Number of Matches: 6

Range 1: 13442 to 13780 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
245.8 bits(530) 0.0 104/113(92%) 0/113(0%) Minus/Minus
Query        1  SR*SVLGVFGEAVESFQ*PDYHSSLCNV*FARDA*DLLHPSFST*YNQRYHKLSDHRHKTVFSNYSCKCRNNV*LNM*GHCSTYTRLSAHLYHTSPTTYTRVLPLLARILLSS  339
                SR  +  +  +AVESFQ*PDYHSSLCNV*FARDA*DLLHPSFST*YNQRYHKLSDHRHKTVFSNYSCKCRNNV*LNM*GHCSTYTRLSAHLYHTSPTTYTRVLPLLARILLSS
Subject  13442  SRRRIPNINVDAVESFQ*PDYHSSLCNV*FARDA*DLLHPSFST*YNQRYHKLSDHRHKTVFSNYSCKCRNNV*LNM*GHCSTYTRLSAHLYHTSPTTYTRVLPLLARILLSS  13780

Range 2: 13443 to 13781 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
238.0 bits(513) 0.0 106/113(94%) 0/113(0%) Plus/Plus
Query        2  EERSILARSGRTRV*VVGEVWYKCAESRV*VLQ*PHMFS*TLLRHLQE*LENTVLCRWSLSL*YR*LYHVENEGCSRSYASRANYTLHKDE**SGYWNDSTASPNTPNTLYRD  340
                EERSILARSGRTRV*VVGEVWYKCAESRV*VLQ*PHMFS*TLLRHLQE*LENTVLCRWSLSL*YR*LYHVENEGCSRSYASRANYTLHKDE**SGYWNDSTAS      L RD
Subject  13443  EERSILARSGRTRV*VVGEVWYKCAESRV*VLQ*PHMFS*TLLRHLQE*LENTVLCRWSLSL*YR*LYHVENEGCSRSYASRANYTLHKDE**SGYWNDSTASTLMFGILLRD  13781

Range 3: 13444 to 13728 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
236.1 bits(509) 0.0 95/95(100%) 0/95(0%) Plus/Plus
Query        3  KREVSLQGVEERAYRLSEKYGINAQRVVCRYYSDLTCLARRYYGIYRNNWKTLSYVDGRLAYDTADCITSKMKGVVDPTHHAQIIHYIKTNDNQV  287
                KREVSLQGVEERAYRLSEKYGINAQRVVCRYYSDLTCLARRYYGIYRNNWKTLSYVDGRLAYDTADCITSKMKGVVDPTHHAQIIHYIKTNDNQV
Subject  13444  KREVSLQGVEERAYRLSEKYGINAQRVVCRYYSDLTCLARRYYGIYRNNWKTLSYVDGRLAYDTADCITSKMKGVVDPTHHAQIIHYIKTNDNQV  13728

Range 4: 13443 to 13727 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
213.2 bits(459) 0.0 95/95(100%) 0/95(0%) Minus/Minus
Query        2  T*LSFVFM*CIICA*CVGSTTPFIFDVIQSAVS*AKRPST*DSVFQLFL*MP**RLAKHVRSL*YLHTTLCAFIPYFSDNLYARSSTPCKDTSLF  286
                T*LSFVFM*CIICA*CVGSTTPFIFDVIQSAVS*AKRPST*DSVFQLFL*MP**RLAKHVRSL*YLHTTLCAFIPYFSDNLYARSSTPCKDTSLF
Subject  13443  T*LSFVFM*CIICA*CVGSTTPFIFDVIQSAVS*AKRPST*DSVFQLFL*MP**RLAKHVRSL*YLHTTLCAFIPYFSDNLYARSSTPCKDTSLF  13727

Range 5: 13444 to 13707 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
206.8 bits(445) 0.0 88/88(100%) 0/88(0%) Minus/Minus
Query        3  YVMYNLRVMRRIYYTLHFRRDTISGIIS*ATIDIRQCFPIIPVNAVITSS*TCEVTVVPTHDSLRIYTILLRQPIRAFFHSLQGYFSL  266
                YVMYNLRVMRRIYYTLHFRRDTISGIIS*ATIDIRQCFPIIPVNAVITSS*TCEVTVVPTHDSLRIYTILLRQPIRAFFHSLQGYFSL
Subject  13444  YVMYNLRVMRRIYYTLHFRRDTISGIIS*ATIDIRQCFPIIPVNAVITSS*TCEVTVVPTHDSLRIYTILLRQPIRAFFHSLQGYFSL  13707

Range 6: 13442 to 13693 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
189.8 bits(408) 0.0 84/84(100%) 0/84(0%) Plus/Plus
Query        1  RREKYPCKEWKNARIGCRRSMV*MRRESCVGTTVTSHV*LDVITAFTGIIGKHCLMSMVA*LMIPLIVSRRK*RV**ILRITRK  252
                RREKYPCKEWKNARIGCRRSMV*MRRESCVGTTVTSHV*LDVITAFTGIIGKHCLMSMVA*LMIPLIVSRRK*RV**ILRITRK
Subject  13442  RREKYPCKEWKNARIGCRRSMV*MRRESCVGTTVTSHV*LDVITAFTGIIGKHCLMSMVA*LMIPLIVSRRK*RV**ILRITRK  13693

Grapevine leafroll associated virus 3 isolate 623, complete genome

Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 4

Range 1: 13450 to 13728 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
185.7 bits(399) 0.0 72/93(77%) 0/93(0%) Plus/Plus
Query        9  EVSLQGVEERAYRLSEKYGINAQRVVCRYYSDLTCLARRYYGIYRNNWKTLSYVDGRLAYDTADCITSKMKGVVDPTHHAQIIHYIKTNDNQV  287
                +VSL+GVE+RAYR+SEK GINAQR++CRYYSDLTCLARR+YGI RNNWKTLSYVDG LAYDTADCITSK++ +++   HA IIHYIKTN+NQV
Subject  13450  KVSLRGVEDRAYRISEKRGINAQRILCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRSMINHADHASIIHYIKTNENQV  13728

Range 2: 13452 to 13727 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
104.2 bits(221) 0.0 58/92(63%) 0/92(0%) Minus/Minus
Query       11  T*LSFVFM*CIICA*CVGSTTPFIFDVIQSAVS*AKRPST*DSVFQLFL*MP**RLAKHVRSL*YLHTTLCAFIPYFSDNLYARSSTPCKDT  286
                T  SFV +*CI+ A*          +VIQSAVS A  PST* SVFQLFL MP* RLA+HVRSL*YLH    AFIP FSD L ARSSTP  +T
Subject  13452  TWFSFVLI*CIMLA*SAWLIILLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNIR*AFIPRFSDIL*ARSSTPRNET  13727

Range 3: 13468 to 13704 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.7 bits(148) 0.0 33/79(42%) 0/79(0%) Minus/Minus
Query       27  VMYNLRVMRRIYYTLHFRRDTISGIIS*ATIDIRQCFPIIPVNAVITSS*TCEVTVVPTHDSLRIYTILLRQPIRAFFH  263
                ++YN  V+  + +T H R  TIS +I   TI I Q  PI+  NAV++ S TCE+T+VPT  +L +Y  L    I A F+
Subject  13468  IVYNASVICMVDHTSHLRSYTISRVIRQRTIYITQRLPIVSANAVMSPSQTCEITIVPTQYTLSVYPALF*YSIGAIFY  13704

Range 4: 13452 to 13745 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.7 bits(124) 0.0 39/98(40%) 0/98(0%) Plus/Plus
Query       11  SILARSGRTRV*VVGEVWYKCAESRV*VLQ*PHMFS*TLLRHLQE*LENTVLCRWSLSL*YR*LYHVENEGCSRSYASRANYTLHKDE**SGYWNDST  304
                S +    R+R+* + +   K +   V*VL * HM  *  LRH Q+ LE+  LCRW + +*+ *LY+   E   +   SR +YTL+ DE   GY + ST
Subject  13452  SFVTGGRRSRL*NIRKARDKRSTYIV*VL**SHMSG*ATLRHSQKQLEDAELCRWYVGV*HG*LYNF*GEKYDQPCRSR*HYTLY*DERKPGYRDYST  13745

Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome

Sequence ID: KX701860.1 Length: 18020 Number of Matches: 4

Range 1: 12968 to 13246 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
185.7 bits(399) 0.0 72/93(77%) 0/93(0%) Plus/Plus
Query        9  EVSLQGVEERAYRLSEKYGINAQRVVCRYYSDLTCLARRYYGIYRNNWKTLSYVDGRLAYDTADCITSKMKGVVDPTHHAQIIHYIKTNDNQV  287
                +VSL+GVE+RAYR+SEK GINAQR++CRYYSDLTCLARR+YGI RNNWKTLSYVDG LAYDTADCITSK++ +++   HA IIHYIKTN+NQV
Subject  12968  KVSLRGVEDRAYRISEKRGINAQRILCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRSMINHADHASIIHYIKTNENQV  13246

Range 2: 12970 to 13245 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
104.2 bits(221) 0.0 58/92(63%) 0/92(0%) Minus/Minus
Query       11  T*LSFVFM*CIICA*CVGSTTPFIFDVIQSAVS*AKRPST*DSVFQLFL*MP**RLAKHVRSL*YLHTTLCAFIPYFSDNLYARSSTPCKDT  286
                T  SFV +*CI+ A*          +VIQSAVS A  PST* SVFQLFL MP* RLA+HVRSL*YLH    AFIP FSD L ARSSTP  +T
Subject  12970  TWFSFVLI*CIMLA*SAWLIILLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNIR*AFIPRFSDIL*ARSSTPRNET  13245

Range 3: 12986 to 13222 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.7 bits(148) 0.0 33/79(42%) 0/79(0%) Minus/Minus
Query       27  VMYNLRVMRRIYYTLHFRRDTISGIIS*ATIDIRQCFPIIPVNAVITSS*TCEVTVVPTHDSLRIYTILLRQPIRAFFH  263
                ++YN  V+  + +T H R  TIS +I   TI I Q  PI+  NAV++ S TCE+T+VPT  +L +Y  L    I A F+
Subject  12986  IVYNASVICMVDHTSHLRSYTISRVIRQRTIYITQRLPIVSANAVMSPSQTCEITIVPTQYTLSVYPALF*YSIGAIFY  13222

Range 4: 12970 to 13263 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.7 bits(124) 0.0 39/98(40%) 0/98(0%) Plus/Plus
Query       11  SILARSGRTRV*VVGEVWYKCAESRV*VLQ*PHMFS*TLLRHLQE*LENTVLCRWSLSL*YR*LYHVENEGCSRSYASRANYTLHKDE**SGYWNDST  304
                S +    R+R+* + +   K +   V*VL * HM  *  LRH Q+ LE+  LCRW + +*+ *LY+   E   +   SR +YTL+ DE   GY + ST
Subject  12970  SFVTGGRRSRL*NIRKARDKRSTYIV*VL**SHMSG*ATLRHSQKQLEDAELCRWYVGV*HG*LYNF*GEKYDQPCRSR*HYTLY*DERKPGYRDYST  13263

Grapevine leafroll associated virus 3 isolate PL 20, complete genome

Sequence ID: GQ352633.1 Length: 18433 Number of Matches: 5

Range 1: 13385 to 13663 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
185.7 bits(399) 0.0 70/93(75%) 0/93(0%) Plus/Plus
Query        9  EVSLQGVEERAYRLSEKYGINAQRVVCRYYSDLTCLARRYYGIYRNNWKTLSYVDGRLAYDTADCITSKMKGVVDPTHHAQIIHYIKTNDNQV  287
                +VSL+GVEERAYR+SEK G+NAQR++CRYYSDLTC+ARR+YGI+RNNWKTLSYVDG LAYDTADCITSK++ +++   HA+IIHYIK+N+NQV
Subject  13385  KVSLRGVEERAYRISEKRGVNAQRLLCRYYSDLTCMARRHYGIHRNNWKTLSYVDGTLAYDTADCITSKVRNMINQADHARIIHYIKSNENQV  13663

Range 2: 13660 to 13716 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
22.1 bits(42) 0.0 8/19(42%) 0/19(0%) Plus/Plus
Query      284  GYWNDSTASPNTPNTLYRD  340
                GYW+ ST    TP+ +  D
Subject  13660  GYWDYSTTPALTPSVVCDD  13716

Range 3: 13387 to 13662 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
93.6 bits(198) 0.0 55/92(60%) 0/92(0%) Minus/Minus
Query       11  T*LSFVFM*CIICA*CVGSTTPFIFDVIQSAVS*AKRPST*DSVFQLFL*MP**RLAKHVRSL*YLHTTLCAFIPYFSDNLYARSSTPCKDT  286
                T  S   +*CII A*          +V+QSAVS A  PST* SVFQLFL*+P* RLA HVRSL*YLH    AF P FSD L ARSSTP  +T
Subject  13387  TWFSLDLI*CIILA*SAWLIIFLTLEVMQSAVSYANVPST*LSVFQLFL*IP*CRLAIHVRSL*YLHNKR*AFTPRFSDIL*ARSSTPRNET  13662

Range 4: 13403 to 13639 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.0 bits(142) 0.0 30/79(38%) 0/79(0%) Minus/Minus
Query       27  VMYNLRVMRRIYYTLHFRRDTISGIIS*ATIDIRQCFPIIPVNAVITSS*TCEVTVVPTHDSLRIYTILLRQPIRAFFH  263
                ++YN  ++  + +  H     +S +I * T+ I Q  PI+PVN V++ S TCE+ VVPT  +L ++  L R PI  FF+
Subject  13403  IVYNPSMICLVDHISHLGSYAVSRVIC*RTVHITQRLPIVPVNTVMSPSHTCEIAVVPT**TLSVHPTLFRYPIGTFFY  13639

Range 5: 13393 to 13641 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.9 bits(107) 0.0 30/83(36%) 0/83(0%) Plus/Plus
Query       17  LARSGRTRV*VVGEVWYKCAESRV*VLQ*PHMFS*TLLRHLQE*LENTVLCRWSLSL*YR*LYHVENEGCSRSYASRANYTLH  265
                + R  RT +* +G+ W + +   +*VLQ  HM+ *  LR+ QE LE+  LC   +S+*+ *L++ + E   +   S  +YTL+
Subject  13393  VTRGRRTCL*DIGKAWGERSTFIM*VLQRSHMYG*ATLRYSQEQLEDAELCGRYVSI*HG*LHNFQGEKYDQPSRSC*DYTLY  13641

Grapevine leafroll associated virus 3 gene for 55 KDa protein, partial cds, isolate: LR3 OkAQ

Sequence ID: AB222854.1 Length: 334 Number of Matches: 4

Range 1: 53 to 331 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
185.7 bits(399) 0.0 72/93(77%) 0/93(0%) Plus/Plus
Query        9  EVSLQGVEERAYRLSEKYGINAQRVVCRYYSDLTCLARRYYGIYRNNWKTLSYVDGRLAYDTADCITSKMKGVVDPTHHAQIIHYIKTNDNQV  287
                +VSL+GVE+RAYR+SEK GINAQR++CRYYSDLTCLARR+YGI RNNWKTLSYVDG LAYDTADCITSK++ +++   HA IIHYIKTN+NQV
Subject     53  KVSLRGVEDRAYRISEKRGINAQRILCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRSMINHADHASIIHYIKTNENQV  331

Range 2: 55 to 330 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
104.2 bits(221) 0.0 58/92(63%) 0/92(0%) Minus/Minus
Query       11  T*LSFVFM*CIICA*CVGSTTPFIFDVIQSAVS*AKRPST*DSVFQLFL*MP**RLAKHVRSL*YLHTTLCAFIPYFSDNLYARSSTPCKDT  286
                T  SFV +*CI+ A*          +VIQSAVS A  PST* SVFQLFL MP* RLA+HVRSL*YLH    AFIP FSD L ARSSTP  +T
Subject     55  TWFSFVLI*CIMLA*SAWLIILLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNIR*AFIPRFSDIL*ARSSTPRNET  330

Range 3: 71 to 307 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.9 bits(144) 0.0 32/79(41%) 0/79(0%) Minus/Minus
Query       27  VMYNLRVMRRIYYTLHFRRDTISGIIS*ATIDIRQCFPIIPVNAVITSS*TCEVTVVPTHDSLRIYTILLRQPIRAFFH  263
                ++YN  V+  + +T H R  TIS +I   TI I Q  PI+  NAV++ S TC++T+VPT  +L +Y  L    I A F+
Subject     71  IVYNASVICMVDHTSHLRSYTISRVIRQRTIYITQRLPIVSANAVMSPSQTCKITIVPTQYTLSVYPALF*YSIGAIFY  307

Range 4: 55 to 333 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.1 bits(114) 0.0 36/93(39%) 0/93(0%) Plus/Plus
Query       11  SILARSGRTRV*VVGEVWYKCAESRV*VLQ*PHMFS*TLLRHLQE*LENTVLCRWSLSL*YR*LYHVENEGCSRSYASRANYTLHKDE**SGY  289
                S +    R+R+* + +   K +   V*VL * +M  *  LRH Q+ LE+  LCRW + +*+ *LY+   E   +   SR +YTL+ DE   GY
Subject     55  SFVTGGRRSRL*NIRKARDKRSTYIV*VL**SYMSG*ATLRHSQKQLEDAELCRWYVGV*HG*LYNF*GEKYDQPCRSR*HYTLY*DERKPGY  333

Nucleotide Sequence (334 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
34
68
102
136
170
204
238
272
306
334

Descriptions

Alignments

Grapevine leafroll associated virus 3, complete genome

Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 7

Range 1: 11171 to 11503 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
259.0 bits(559) 0.0 110/111(99%) 0/111(0%) Plus/Minus
Query        1  TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDTFPLIFCLITSTIALSISLPPKKLSPTEKMTHNIFPFFLTNETSKAPPPKSKTANNRSSTRDLAKE*RAAAVGSLTTP  333
                TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDTFPLIFCLITSTIALSISLPPKKLSPTEKMTHNIFPFFLTNETSK PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTP
Subject  11171  TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDTFPLIFCLITSTIALSISLPPKKLSPTEKMTHNIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAVGSLTTP  11503

Range 2: 11171 to 11503 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
256.7 bits(554) 0.0 110/111(99%) 0/111(0%) Minus/Plus
Query        1  RCC*RTDSRSPLFLS*VASRRPIISGFRLWGRSFRRLIR*EEGKYIMRHLFSGR*FLGW*RY**SYCGSYQAKDQRKSV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC  333
                RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR+FRRLIR*EEGKYIMRHLFSGR*FLGW*RY**SYCGSYQAKDQRKSV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC
Subject  11171  RCC*RTDSRSPLFLS*VASRRPIISGFRLWGRNFRRLIR*EEGKYIMRHLFSGR*FLGW*RY**SYCGSYQAKDQRKSV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC  11503

Range 3: 11170 to 11502 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
252.6 bits(545) 0.0 111/111(100%) 0/111(0%) Minus/Plus
Query        2  EVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWAIISWVVEILIELLWKLSSKRSKEKCLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV  334
                EVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWAIISWVVEILIELLWKLSSKRSKEKCLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV
Subject  11170  EVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWAIISWVVEILIELLWKLSSKRSKEKCLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV  11502

Range 4: 11172 to 11501 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
251.7 bits(543) 0.0 110/110(100%) 0/110(0%) Plus/Minus
Query        3  TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRHFSFDLLLDNFHNSSINISTTQEIIAH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCGCRFVNNT  332
                TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRHFSFDLLLDNFHNSSINISTTQEIIAH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCGCRFVNNT
Subject  11172  TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRHFSFDLLLDNFHNSSINISTTQEIIAH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCGCRFVNNT  11501

Range 5: 11172 to 11501 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
251.7 bits(543) 0.0 109/110(99%) 0/110(0%) Minus/Plus
Query        3  GVVNEPTAAALYSLAKSRVEDLLLAVFDFGGGAFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKVSDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG  332
                GVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG FDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKVSDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG
Subject  11172  GVVNEPTAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKVSDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG  11501

Range 6: 11170 to 11346 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
130.7 bits(279) 0.0 58/59(98%) 0/59(0%) Plus/Minus
Query      158  HPRNYRPLKR*RIIYFPSS*RMRRRKLLPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL  334
                HPRNYRPLKR*RIIYFPSS*RMRRRK LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL
Subject  11170  HPRNYRPLKR*RIIYFPSS*RMRRRKFLPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL  11346

Range 7: 11380 to 11502 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.8 bits(194) 0.0 41/41(100%) 0/41(0%) Plus/Minus
Query        2  HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTLFL*SFA*  124
                HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTLFL*SFA*
Subject  11380  HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTLFL*SFA*  11502

Grapevine leafroll associated virus 3 isolate DOB 11 heat shock protein 70 like protein (HSP70) gene, partial cds

Sequence ID: KP866979.1 Length: 1140 Number of Matches: 7

Range 1: 229 to 561 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
259.0 bits(559) 0.0 110/111(99%) 0/111(0%) Plus/Minus
Query        1  TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDTFPLIFCLITSTIALSISLPPKKLSPTEKMTHNIFPFFLTNETSKAPPPKSKTANNRSSTRDLAKE*RAAAVGSLTTP  333
                TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDTFPLIFCLITSTIALSISLPPKKLSPTEKMTHNIFPFFLTNETSK PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTP
Subject    229  TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDTFPLIFCLITSTIALSISLPPKKLSPTEKMTHNIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAVGSLTTP  561

Range 2: 230 to 559 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
251.7 bits(543) 0.0 109/110(99%) 0/110(0%) Minus/Plus
Query        3  GVVNEPTAAALYSLAKSRVEDLLLAVFDFGGGAFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKVSDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG  332
                GVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG FDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKVSDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG
Subject    230  GVVNEPTAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKVSDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG  559

Range 3: 229 to 561 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
246.2 bits(531) 0.0 106/111(95%) 0/111(0%) Minus/Plus
Query        1  RCC*RTDSRSPLFLS*VASRRPIISGFRLWGRSFRRLIR*EEGKYIMRHLFSGR*FLGW*RY**SYCGSYQAKDQRKSV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC  333
                RCC*R D RSPLFLS*VASRRPIISGF  WGR FRRLIR*EEGKYIMRHLFSGR*FLGW*RY**SYCGSYQAKDQRKSV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC
Subject    229  RCC*RADGRSPLFLS*VASRRPIISGF*FWGRDFRRLIR*EEGKYIMRHLFSGR*FLGW*RY**SYCGSYQAKDQRKSV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC  561

Range 4: 228 to 560 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
239.8 bits(517) 0.0 106/111(95%) 0/111(0%) Minus/Plus
Query        2  EVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWAIISWVVEILIELLWKLSSKRSKEKCLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV  334
                EVLLT+R+PQPSIP*LSRE*KTYY*RF  LGE LSTSHSLRRREIYYASSFQWAIISWVVEILIELLWKLSSKRSKEKCLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV
Subject    228  EVLLTSRRPQPSIP*LSRE*KTYY*RFLILGEGLSTSHSLRRREIYYASSFQWAIISWVVEILIELLWKLSSKRSKEKCLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV  560

Range 5: 230 to 559 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
238.9 bits(515) 0.0 105/110(95%) 0/110(0%) Plus/Minus
Query        3  TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRHFSFDLLLDNFHNSSINISTTQEIIAH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCGCRFVNNT  332
                TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRHFSFDLLLDNFHNSSINISTTQEIIAH*KDDA*YISLLLNE*DVES SPK++NR***VFYSRLS*GIEGCG R VNNT
Subject    230  TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRHFSFDLLLDNFHNSSINISTTQEIIAH*KDDA*YISLLLNE*DVESPSPKIKNR***VFYSRLS*GIEGCGRRLVNNT  559

Range 6: 228 to 404 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
121.6 bits(259) 0.0 54/59(92%) 0/59(0%) Plus/Minus
Query      158  HPRNYRPLKR*RIIYFPSS*RMRRRKLLPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL  334
                HPRNYRPLKR*RIIYFPSS*RMRRRK LPQ++KPLIIGLLLAT*LRNRGLR S R*QHL
Subject    228  HPRNYRPLKR*RIIYFPSS*RMRRRKSLPQNQKPLIIGLLLAT*LRNRGLRPSAR*QHL  404

Range 7: 438 to 560 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.8 bits(194) 0.0 41/41(100%) 0/41(0%) Plus/Minus
Query        2  HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTLFL*SFA*  124
                HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTLFL*SFA*
Subject    438  HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTLFL*SFA*  560

Grapevine leafroll associated virus 3 isolate DOB 115 heat shock protein 70 like protein (HSP70) gene, partial cds

Sequence ID: KP866981.1 Length: 1140 Number of Matches: 7

Range 1: 229 to 561 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
259.0 bits(559) 0.0 110/111(99%) 0/111(0%) Plus/Minus
Query        1  TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDTFPLIFCLITSTIALSISLPPKKLSPTEKMTHNIFPFFLTNETSKAPPPKSKTANNRSSTRDLAKE*RAAAVGSLTTP  333
                TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDTFPLIFCLITSTIALSISLPPKKLSPTEKMTHNIFPFFLTNETSK PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTP
Subject    229  TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDTFPLIFCLITSTIALSISLPPKKLSPTEKMTHNIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAVGSLTTP  561

Range 2: 229 to 561 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
256.7 bits(554) 0.0 110/111(99%) 0/111(0%) Minus/Plus
Query        1  RCC*RTDSRSPLFLS*VASRRPIISGFRLWGRSFRRLIR*EEGKYIMRHLFSGR*FLGW*RY**SYCGSYQAKDQRKSV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC  333
                RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR+FRRLIR*EEGKYIMRHLFSGR*FLGW*RY**SYCGSYQAKDQRKSV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC
Subject    229  RCC*RTDSRSPLFLS*VASRRPIISGFRLWGRNFRRLIR*EEGKYIMRHLFSGR*FLGW*RY**SYCGSYQAKDQRKSV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC  561

Range 3: 228 to 560 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
252.6 bits(545) 0.0 111/111(100%) 0/111(0%) Minus/Plus
Query        2  EVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWAIISWVVEILIELLWKLSSKRSKEKCLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV  334
                EVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWAIISWVVEILIELLWKLSSKRSKEKCLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV
Subject    228  EVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWAIISWVVEILIELLWKLSSKRSKEKCLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV  560

Range 4: 230 to 559 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
251.7 bits(543) 0.0 109/110(99%) 0/110(0%) Minus/Plus
Query        3  GVVNEPTAAALYSLAKSRVEDLLLAVFDFGGGAFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKVSDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG  332
                GVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG FDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKVSDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG
Subject    230  GVVNEPTAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKVSDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG  559

Range 5: 230 to 559 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
251.7 bits(543) 0.0 110/110(100%) 0/110(0%) Plus/Minus
Query        3  TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRHFSFDLLLDNFHNSSINISTTQEIIAH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCGCRFVNNT  332
                TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRHFSFDLLLDNFHNSSINISTTQEIIAH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCGCRFVNNT
Subject    230  TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRHFSFDLLLDNFHNSSINISTTQEIIAH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCGCRFVNNT  559

Range 6: 228 to 404 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
130.7 bits(279) 0.0 58/59(98%) 0/59(0%) Plus/Minus
Query      158  HPRNYRPLKR*RIIYFPSS*RMRRRKLLPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL  334
                HPRNYRPLKR*RIIYFPSS*RMRRRK LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL
Subject    228  HPRNYRPLKR*RIIYFPSS*RMRRRKFLPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL  404

Range 7: 438 to 560 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.8 bits(194) 0.0 41/41(100%) 0/41(0%) Plus/Minus
Query        2  HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTLFL*SFA*  124
                HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTLFL*SFA*
Subject    438  HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTLFL*SFA*  560

Grapevine leafroll associated virus 3 isolate DOB 116 heat shock protein 70 like protein (HSP70) gene, partial cds

Sequence ID: KP866982.1 Length: 1140 Number of Matches: 7

Range 1: 229 to 561 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
259.0 bits(559) 0.0 110/111(99%) 0/111(0%) Plus/Minus
Query        1  TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDTFPLIFCLITSTIALSISLPPKKLSPTEKMTHNIFPFFLTNETSKAPPPKSKTANNRSSTRDLAKE*RAAAVGSLTTP  333
                TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDTFPLIFCLITSTIALSISLPPKKLSPTEKMTHNIFPFFLTNETSK PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTP
Subject    229  TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDTFPLIFCLITSTIALSISLPPKKLSPTEKMTHNIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAVGSLTTP  561

Range 2: 229 to 561 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
256.7 bits(554) 0.0 110/111(99%) 0/111(0%) Minus/Plus
Query        1  RCC*RTDSRSPLFLS*VASRRPIISGFRLWGRSFRRLIR*EEGKYIMRHLFSGR*FLGW*RY**SYCGSYQAKDQRKSV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC  333
                RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR+FRRLIR*EEGKYIMRHLFSGR*FLGW*RY**SYCGSYQAKDQRKSV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC
Subject    229  RCC*RTDSRSPLFLS*VASRRPIISGFRLWGRNFRRLIR*EEGKYIMRHLFSGR*FLGW*RY**SYCGSYQAKDQRKSV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC  561

Range 3: 228 to 560 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
252.6 bits(545) 0.0 111/111(100%) 0/111(0%) Minus/Plus
Query        2  EVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWAIISWVVEILIELLWKLSSKRSKEKCLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV  334
                EVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWAIISWVVEILIELLWKLSSKRSKEKCLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV
Subject    228  EVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWAIISWVVEILIELLWKLSSKRSKEKCLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV  560

Range 4: 230 to 559 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
251.7 bits(543) 0.0 109/110(99%) 0/110(0%) Minus/Plus
Query        3  GVVNEPTAAALYSLAKSRVEDLLLAVFDFGGGAFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKVSDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG  332
                GVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG FDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKVSDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG
Subject    230  GVVNEPTAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKVSDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG  559

Range 5: 230 to 559 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
251.7 bits(543) 0.0 110/110(100%) 0/110(0%) Plus/Minus
Query        3  TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRHFSFDLLLDNFHNSSINISTTQEIIAH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCGCRFVNNT  332
                TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRHFSFDLLLDNFHNSSINISTTQEIIAH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCGCRFVNNT
Subject    230  TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRHFSFDLLLDNFHNSSINISTTQEIIAH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCGCRFVNNT  559

Range 6: 228 to 404 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
130.7 bits(279) 0.0 58/59(98%) 0/59(0%) Plus/Minus
Query      158  HPRNYRPLKR*RIIYFPSS*RMRRRKLLPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL  334
                HPRNYRPLKR*RIIYFPSS*RMRRRK LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL
Subject    228  HPRNYRPLKR*RIIYFPSS*RMRRRKFLPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL  404

Range 7: 438 to 560 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.8 bits(194) 0.0 41/41(100%) 0/41(0%) Plus/Minus
Query        2  HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTLFL*SFA*  124
                HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTLFL*SFA*
Subject    438  HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTLFL*SFA*  560

Grapevine leafroll associated virus 3 isolate DOB 20 heat shock protein 70 like protein (HSP70) gene, partial cds

Sequence ID: KP866984.1 Length: 1140 Number of Matches: 7

Range 1: 229 to 561 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
259.0 bits(559) 0.0 110/111(99%) 0/111(0%) Plus/Minus
Query        1  TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDTFPLIFCLITSTIALSISLPPKKLSPTEKMTHNIFPFFLTNETSKAPPPKSKTANNRSSTRDLAKE*RAAAVGSLTTP  333
                TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDTFPLIFCLITSTIALSISLPPKKLSPTEKMTHNIFPFFLTNETSK PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTP
Subject    229  TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDTFPLIFCLITSTIALSISLPPKKLSPTEKMTHNIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAVGSLTTP  561

Range 2: 229 to 561 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
256.7 bits(554) 0.0 110/111(99%) 0/111(0%) Minus/Plus
Query        1  RCC*RTDSRSPLFLS*VASRRPIISGFRLWGRSFRRLIR*EEGKYIMRHLFSGR*FLGW*RY**SYCGSYQAKDQRKSV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC  333
                RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR+FRRLIR*EEGKYIMRHLFSGR*FLGW*RY**SYCGSYQAKDQRKSV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC
Subject    229  RCC*RTDSRSPLFLS*VASRRPIISGFRLWGRNFRRLIR*EEGKYIMRHLFSGR*FLGW*RY**SYCGSYQAKDQRKSV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC  561

Range 3: 228 to 560 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
252.6 bits(545) 0.0 111/111(100%) 0/111(0%) Minus/Plus
Query        2  EVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWAIISWVVEILIELLWKLSSKRSKEKCLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV  334
                EVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWAIISWVVEILIELLWKLSSKRSKEKCLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV
Subject    228  EVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWAIISWVVEILIELLWKLSSKRSKEKCLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV  560

Range 4: 230 to 559 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
251.7 bits(543) 0.0 109/110(99%) 0/110(0%) Minus/Plus
Query        3  GVVNEPTAAALYSLAKSRVEDLLLAVFDFGGGAFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKVSDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG  332
                GVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG FDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKVSDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG
Subject    230  GVVNEPTAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKVSDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG  559

Range 5: 230 to 559 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
251.7 bits(543) 0.0 110/110(100%) 0/110(0%) Plus/Minus
Query        3  TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRHFSFDLLLDNFHNSSINISTTQEIIAH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCGCRFVNNT  332
                TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRHFSFDLLLDNFHNSSINISTTQEIIAH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCGCRFVNNT
Subject    230  TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRHFSFDLLLDNFHNSSINISTTQEIIAH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCGCRFVNNT  559

Range 6: 228 to 404 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
130.7 bits(279) 0.0 58/59(98%) 0/59(0%) Plus/Minus
Query      158  HPRNYRPLKR*RIIYFPSS*RMRRRKLLPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL  334
                HPRNYRPLKR*RIIYFPSS*RMRRRK LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL
Subject    228  HPRNYRPLKR*RIIYFPSS*RMRRRKFLPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL  404

Range 7: 438 to 560 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.8 bits(194) 0.0 41/41(100%) 0/41(0%) Plus/Minus
Query        2  HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTLFL*SFA*  124
                HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTLFL*SFA*
Subject    438  HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTLFL*SFA*  560

Nucleotide Sequence (503 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
51
102
153
204
255
306
357
408
459
503

Descriptions

Alignments

Grapevine leafroll associated virus 3 isolate GH24, complete genome

Sequence ID: KM058745.1 Length: 18493 Number of Matches: 7

Range 1: 15092 to 15586 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
386.9 bits(838) 0.0 164/165(99%) 0/165(0%) Minus/Plus
Query        9  VSSSFMLVNSVGDYFECGLCHNKPYVGREVVFARKYIGGRGIEVTTGKNYTSNNWNESSYVINVTIKNGIARTVVNSSYTQTDVTGLPKDFNRIYKITKIVSVDSNLYPGCFSASKLDVMNIRSVSIQGKTIYFRDVLLKPLKKSFLALRETALGIDDSSLLRSS  503
                VSSSFMLVNS GDYFECGLCHNKPYVGREVVFARKYIGGRGIEVTTGKNYTSNNWNESSYVINVTIKNGIARTVVNSSYTQTDVTGLPKDFNRIYKITKIVSVDSNLYPGCFSASKLDVMNIRSVSIQGKTIYFRDVLLKPLKKSFLALRETALGIDDSSLLRSS
Subject  15092  VSSSFMLVNSEGDYFECGLCHNKPYVGREVVFARKYIGGRGIEVTTGKNYTSNNWNESSYVINVTIKNGIARTVVNSSYTQTDVTGLPKDFNRIYKITKIVSVDSNLYPGCFSASKLDVMNIRSVSIQGKTIYFRDVLLKPLKKSFLALRETALGIDDSSLLRSS  15586

Range 2: 15092 to 15586 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
382.3 bits(828) 0.0 164/165(99%) 0/165(0%) Plus/Minus
Query        9  TTSQQ**VVYT*SRFP*G*ETFLQRL**HVSKVYRLALNRDGPYIHHVQFTCRKTSWVQVRIN*HYFCYFVYSIKILRQSCYVGLSIR*INHGSRYPVLYSHIDYIRRLVPIV*GVILPRGDFYSSTSDIFPSKHHFSPHIRFVVA*TAFKIVAYTINEHKRR*Y  503
                TTSQQ**VVYT*SRFP*G*ETFLQRL**HVSKVYRLALNRDGPYIHHVQFTCRKTSWVQVRIN*HYFCYFVYSIKILRQSCYVGLSIR*INHGSRYPVLYSHIDYIRRLVPIV*GVILPRGDFYSSTSDIFPSKHHFSPHIRFVVA*TAFKIVA+TINEHKRR*Y
Subject  15092  TTSQQ**VVYT*SRFP*G*ETFLQRL**HVSKVYRLALNRDGPYIHHVQFTCRKTSWVQVRIN*HYFCYFVYSIKILRQSCYVGLSIR*INHGSRYPVLYSHIDYIRRLVPIV*GVILPRGDFYSSTSDIFPSKHHFSPHIRFVVA*TAFKIVAFTINEHKRR*Y  15586

Range 3: 15093 to 15587 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
371.8 bits(805) 0.0 164/165(99%) 0/165(0%) Minus/Plus
Query        8  YHRRLCSLIV*ATILNAVYATTNLMWGEKWCLLGNISEVEE*KSPRGRITPQTIGTSRRM*SM*L*RTG*REPWLIHLILRPT*QDCLRILIEYTK*QK*CQLIRTCTQDVFRQVNWT**I*GPSLFKARRYTLETCY*SR*RKVS*P*GKRL*V*TTHHCCEVV  502
                YHRRLCSLIV ATILNAVYATTNLMWGEKWCLLGNISEVEE*KSPRGRITPQTIGTSRRM*SM*L*RTG*REPWLIHLILRPT*QDCLRILIEYTK*QK*CQLIRTCTQDVFRQVNWT**I*GPSLFKARRYTLETCY*SR*RKVS*P*GKRL*V*TTHHCCEVV
Subject  15093  YHRRLCSLIVKATILNAVYATTNLMWGEKWCLLGNISEVEE*KSPRGRITPQTIGTSRRM*SM*L*RTG*REPWLIHLILRPT*QDCLRILIEYTK*QK*CQLIRTCTQDVFRQVNWT**I*GPSLFKARRYTLETCY*SR*RKVS*P*GKRL*V*TTHHCCEVV  15587

Range 4: 15094 to 15585 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
370.8 bits(803) 0.0 163/164(99%) 0/164(0%) Plus/Minus
Query       10  LLRNNDESSIPKAVSLKARKLFFSGFNSTSLKYIVLP*IETDLIFITSNLLAEKHPGYRFESTDTIFVILYILLKSLGSPVTSV*V*DELTTVRAIPFFIVTLITYDDSFQLFEV*FFPVVTSIPLPPIYFLANTTSLPT*GLLWHKPHSK*SPTLLTSINDDD  501
                LLRNNDESSIPKAVSLKARKLFFSGFNSTSLKYIVLP*IETDLIFITSNLLAEKHPGYRFESTDTIFVILYILLKSLGSPVTSV*V*DELTTVRAIPFFIVTLITYDDSFQLFEV*FFPVVTSIPLPPIYFLANTTSLPT*GLLWHKPHSK*SP+LLTSINDDD
Subject  15094  LLRNNDESSIPKAVSLKARKLFFSGFNSTSLKYIVLP*IETDLIFITSNLLAEKHPGYRFESTDTIFVILYILLKSLGSPVTSV*V*DELTTVRAIPFFIVTLITYDDSFQLFEV*FFPVVTSIPLPPIYFLANTTSLPT*GLLWHKPHSK*SPSLLTSINDDD  15585

Range 5: 15094 to 15585 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
366.7 bits(794) 0.0 163/164(99%) 0/164(0%) Minus/Plus
Query       10  IIVVYAR**CRRLF*MRFMPQQTLCGERSGVC*EIYRR*RNRSHHGEELHLKQLERVVVCNQCDYKERDSANRG*FILYSDRRNRTA*GF**NIQNNKNSVS*FEPVPRMFFGK*IGRDEYKVRLYSRQDDIL*RRAIKAAEEKFPSLKGNGFRYRRLIIVAK*  501
                IIVVYAR** RRLF*MRFMPQQTLCGERSGVC*EIYRR*RNRSHHGEELHLKQLERVVVCNQCDYKERDSANRG*FILYSDRRNRTA*GF**NIQNNKNSVS*FEPVPRMFFGK*IGRDEYKVRLYSRQDDIL*RRAIKAAEEKFPSLKGNGFRYRRLIIVAK*
Subject  15094  IIVVYAR***RRLF*MRFMPQQTLCGERSGVC*EIYRR*RNRSHHGEELHLKQLERVVVCNQCDYKERDSANRG*FILYSDRRNRTA*GF**NIQNNKNSVS*FEPVPRMFFGK*IGRDEYKVRLYSRQDDIL*RRAIKAAEEKFPSLKGNGFRYRRLIIVAK*  15585

Range 6: 15303 to 15584 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
213.2 bits(459) 0.0 94/94(100%) 0/94(0%) Plus/Minus
Query       11  YFATMMSRLYLKPFPLRLGNFSSAALIARL*SISSCLE*RRTLYSSRPIYLPKNILGTGSNQLTLFLLFCIFY*NP*AVLLRRSEYKMN*PRFA  292
                YFATMMSRLYLKPFPLRLGNFSSAALIARL*SISSCLE*RRTLYSSRPIYLPKNILGTGSNQLTLFLLFCIFY*NP*AVLLRRSEYKMN*PRFA
Subject  15303  YFATMMSRLYLKPFPLRLGNFSSAALIARL*SISSCLE*RRTLYSSRPIYLPKNILGTGSNQLTLFLLFCIFY*NP*AVLLRRSEYKMN*PRFA  15584

Range 7: 15093 to 15254 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
131.7 bits(281) 0.0 54/54(100%) 0/54(0%) Plus/Minus
Query      341  NCLRCNSSPW*LLFLYLRYIS*QTPLLSPHKVCCGINRIQNSRLHY*RA*TTMI  502
                NCLRCNSSPW*LLFLYLRYIS*QTPLLSPHKVCCGINRIQNSRLHY*RA*TTMI
Subject  15093  NCLRCNSSPW*LLFLYLRYIS*QTPLLSPHKVCCGINRIQNSRLHY*RA*TTMI  15254

Grapevine leafroll associated virus 3 isolate GH11, complete genome

Sequence ID: JQ655295.1 Length: 18671 Number of Matches: 8

Range 1: 15291 to 15776 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
301.2 bits(651) 0.0 119/162(73%) 0/162(0%) Minus/Plus
Query       18  VSSSFMLVNSVGDYFECGLCHNKPYVGREVVFARKYIGGRGIEVTTGKNYTSNNWNESSYVINVTIKNGIARTVVNSSYTQTDVTGLPKDFNRIYKITKIVSVDSNLYPGCFSASKLDVMNIRSVSIQGKTIYFRDVLLKPLKKSFLALRETALGIDDSSLL  503
                VSSSFML+N+ GDY+ECG+CHNKPY+GREV+FA+KYI  +GIE+TTGKNYTSNNWNESSY+I V I NG+A+T VNSSYTQTDVTGLPKD+ RIYKITKIVSVD NLYPGCFSA+KL+VM+IRS+ +QG+ I FR ++LKP++KSFLA  E  + +DDSSLL
Subject  15291  VSSSFMLMNARGDYYECGVCHNKPYLGREVIFAKKYINKQGIEITTGKNYTSNNWNESSYLIRVEINNGLAQTTVNSSYTQTDVTGLPKDWTRIYKITKIVSVDINLYPGCFSAAKLNVMSIRSIFLQGRDIDFRKIILKPMRKSFLARLEDVMSVDDSSLL  15776

Range 2: 15293 to 15775 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
196.3 bits(422) 0.0 102/161(63%) 0/161(0%) Plus/Minus
Query       19  NNDESSIPKAVSLKARKLFFSGFNSTSLKYIVLP*IETDLIFITSNLLAEKHPGYRFESTDTIFVILYILLKSLGSPVTSV*V*DELTTVRAIPFFIVTLITYDDSFQLFEV*FFPVVTSIPLPPIYFLANTTSLPT*GLLWHKPHSK*SPTLLTSINDDD  501
                +N+ESS     S  ARK F  GFN   LK I LP  + DLI IT NL AEK PG RF ST+TI VILYI ++SLG+PVTSV*V*DELT V A P  I TLI YDDSFQL +V*F PVV SIP   IYFLA  TSLP  GLL H PHS *SP    SINDD+
Subject  15293  SNEESSTLITSSSLARKDFLIGFNIIFLKSISLPCKKIDLIDITFNLAAEKQPG*RFISTETILVILYIRVQSLGNPVTSV*V*DELTVV*ANPLLISTLIKYDDSFQLLDV*FLPVVISIPCLLIYFLAKITSLPKYGLL*HTPHS**SPLAFISINDDE  15775

Range 3: 15297 to 15728 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
119.7 bits(255) 0.0 63/144(44%) 0/144(0%) Plus/Minus
Query       66  ETFLQRL**HVSKVYRLALNRDGPYIHHVQFTCRKTSWVQVRIN*HYFCYFVYSIKILRQSCYVGLSIR*INHGSRYPVLYSHIDYIRRLVPIV*GVILPRGDFYSSTSDIFPSKHHFSPHIRFVVA*TAFKIVAYTINEHKRR  497
                E F  R * ++SKVY  AL  + PY H+VQF+ RKT+ V++ I *+Y  Y +Y+  +LRQ C + LS+ *I+      V+  H + IRRL+PIV  V+L   +  +   DI  SK++F P IRFVV   AF +V   I+ HKRR
Subject  15297  ERFPHRF*YNLSKVYISAL*ENRPYRHYVQFSRRKTARVEIYIY*NYLSYLIYTSPVLRQPCDICLSVG*IDSSLSQSVVDFHSN*IRRLIPIVGRVVLTCRNLDTLLIDILLSKNNFPPQIRFVVTHAAFVVVTPRIH*HKRR  15728

Range 4: 15338 to 15772 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
97.3 bits(206) 0.0 62/145(43%) 0/145(0%) Minus/Plus
Query       22  MRFMPQQTLCGERSGVC*EIYRR*RNRSHHGEELHLKQLERVVVCNQCDYKERDSANRG*FILYSDRRNRTA*GF**NIQNNKNSVS*FEPVPRMFFGK*IGRDEYKVRLYSRQDDIL*RRAIKAAEEKFPSLKGNGFRYRRLII  456
                MR + QQT+ GE S  C*E+Y+  R R +   ELH++QLE VVV N    ++R  +N   FIL+SDR +R A*G    I +N +S S ++ +P +FF  *I R+ YKV   +RQ   L*+  IK  EE FP         RRL +
Subject  15338  MRRVSQQTVFGEGSYFC*EVYQ*ARYRDYDR*ELHVQQLE*VVVFN*SGNQQRIGSNYCQFILHSDRCHRVA*GLDSYI*DN*DSFSRYKSLPGLFFCG*IERNVYKVDFLTRQRYRL*KDYIKTDEEIFPC*TRRRNERRRLFV  15772

Range 5: 15517 to 15774 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.0 bits(94) 0.0 37/86(43%) 0/86(0%) Minus/Plus
Query       20  IHLILRPT*QDCLRILIEYTK*QK*CQLIRTCTQDVFRQVNWT**I*GPSLFKARRYTLETCY*SR*RKVS*P*GKRL*V*TTHHC  277
                IH  LR   Q CLR  + Y +* +* Q I   T+ VF ++N T* +*G   +KA   TLE  Y*+R*  +S    K  * *TT  C
Subject  15517  IHPTLRQMSQGCLRTGLVYIR*LR*FQ*I*ISTRAVFLRLN*T*CL*GRFSYKAEI*TLERLY*NR*GNLSLLD*KT**A*TTLRC  15774

Range 6: 15292 to 15474 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
44.6 bits(91) 0.0 26/61(43%) 0/61(0%) Minus/Plus
Query      320  YHRRLCSLIV*ATILNAVYATTNLMWGEKWCLLGNISEVEE*KSPRGRITPQTIGTSRRM*  502
                + RRLC  +   T  NA   TTN +WG K  LL +IS  +  +  + R T  TIG SRR+*
Subject  15292  FRRRLC**MRGVTTTNAACVTTNRIWGGKLFLLRSISISKVSRLRQVRTTRPTIGMSRRI*  15474

Range 7: 15298 to 15453 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
39.6 bits(80) 0.0 23/52(44%) 0/52(0%) Plus/Minus
Query      341  NCLRCNSSPW*LLFLYLRYIS*QTPLLSPHKVCCGINRIQNSRLHY*RA*TT  496
                NC  C+S   *  +L   Y S*Q  L SP+ VCC   RI++S   +  A*TT
Subject  15298  NCWTCSSYLS*SRYLAY*YTS*QK*LPSPNTVCCDTRRIRSSHPSHSLA*TT  15453

Range 8: 15505 to 15729 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.9 bits(72) 0.0 30/75(40%) 0/75(0%) Plus/Minus
Query       65  GNFSSAALIARL*SISSCLE*RRTLYSSRPIYLPKNILGTGSNQLTLFLLFCIFY*NP*AVLLRRSEYKMN*PRF  289
                G  SS+ LI   *S+  CL  + TL + R I   KN  G     L L  L  I+  +P*A L   SE +MN*  F
Subject  15505  GKISSSVLI*SF*SLYLCLVRKSTL*TLRSI*PQKNSPGRDLYLLKLS*LSYIYESSP*ATL*HLSECRMN*Q*F  15729

Grapevine leafroll associated virus 3 isolate GH30, complete genome

Sequence ID: JQ655296.1 Length: 18576 Number of Matches: 8

Range 1: 15196 to 15681 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
301.2 bits(651) 0.0 119/162(73%) 0/162(0%) Minus/Plus
Query       18  VSSSFMLVNSVGDYFECGLCHNKPYVGREVVFARKYIGGRGIEVTTGKNYTSNNWNESSYVINVTIKNGIARTVVNSSYTQTDVTGLPKDFNRIYKITKIVSVDSNLYPGCFSASKLDVMNIRSVSIQGKTIYFRDVLLKPLKKSFLALRETALGIDDSSLL  503
                VSSSFML+N+ GDY+ECG+CHNKPY+GREV+FA+KYI  +GIE+TTGKNYTSNNWNESSY+I V I NG+A+T VNSSYTQTDVTGLPKD+ RIYKITKIVSVD NLYPGCFSA+KL+VM+IRS+ +QG+ I FR ++LKP++KSFLA  E  + +DDSSLL
Subject  15196  VSSSFMLMNARGDYYECGVCHNKPYLGREVIFAKKYINKQGIEITTGKNYTSNNWNESSYLIKVEINNGLAQTTVNSSYTQTDVTGLPKDWTRIYKITKIVSVDINLYPGCFSAAKLNVMSIRSIFLQGRDIDFRKIILKPMRKSFLARLEDVMSVDDSSLL  15681

Range 2: 15198 to 15680 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
196.3 bits(422) 0.0 102/161(63%) 0/161(0%) Plus/Minus
Query       19  NNDESSIPKAVSLKARKLFFSGFNSTSLKYIVLP*IETDLIFITSNLLAEKHPGYRFESTDTIFVILYILLKSLGSPVTSV*V*DELTTVRAIPFFIVTLITYDDSFQLFEV*FFPVVTSIPLPPIYFLANTTSLPT*GLLWHKPHSK*SPTLLTSINDDD  501
                +N+ESS     S  ARK F  GFN   LK I LP  + DLI IT NL AEK PG RF ST+TI VILYI ++SLG+PVTSV*V*DELT V A P  I TLI YDDSFQL +V*F PVV SIP   IYFLA  TSLP  GLL H PHS *SP    SINDD+
Subject  15198  SNEESSTLITSSSLARKDFLIGFNIIFLKSISLPCKKIDLIDITFNLAAEKQPG*RFISTETILVILYIRVQSLGNPVTSV*V*DELTVV*ANPLLISTLIKYDDSFQLLDV*FLPVVISIPCLLIYFLAKITSLPKYGLL*HTPHS**SPLAFISINDDE  15680

Range 3: 15202 to 15633 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.4 bits(252) 0.0 62/144(43%) 0/144(0%) Plus/Minus
Query       66  ETFLQRL**HVSKVYRLALNRDGPYIHHVQFTCRKTSWVQVRIN*HYFCYFVYSIKILRQSCYVGLSIR*INHGSRYPVLYSHIDYIRRLVPIV*GVILPRGDFYSSTSDIFPSKHHFSPHIRFVVA*TAFKIVAYTINEHKRR  497
                E F  R * ++SKVY  AL  + PY H+VQF+ RK + V++ I *+Y  Y +Y+  +LRQ C + LS+ *I+      V+  H + IRRL+PIV  V+L   +  +   DI  SK++F P IRFVV   AF +V   I+ HKRR
Subject  15202  ERFPHRF*YNLSKVYISAL*ENRPYRHYVQFSRRKAARVEIYIY*NYLSYLIYTSPVLRQPCDICLSVG*IDSSLSQSVVDFHFN*IRRLIPIVGRVVLTCRNLDTLLIDILLSKNNFPPQIRFVVTHAAFVVVTPRIH*HKRR  15633

Range 4: 15243 to 15677 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.3 bits(193) 0.0 60/145(41%) 0/145(0%) Minus/Plus
Query       22  MRFMPQQTLCGERSGVC*EIYRR*RNRSHHGEELHLKQLERVVVCNQCDYKERDSANRG*FILYSDRRNRTA*GF**NIQNNKNSVS*FEPVPRMFFGK*IGRDEYKVRLYSRQDDIL*RRAIKAAEEKFPSLKGNGFRYRRLII  456
                MR + QQT+ GE S  C*E+Y+  R R +   ELH++QLE VVV N    ++R  +N   FIL+SDR +R A*G    I +N +S S ++ +P + F  *I R+ YKV   + Q   L*+  IK  EE FP         RRL +
Subject  15243  MRRVSQQTVFGEGSYFC*EVYQ*ARYRDYDR*ELHVQQLE*VVVFN*SGNQQRIGSNYCQFILHSDRCHRVA*GLDSYI*DN*DSFSRYKSLPGLLFCG*IERNVYKVDFLTGQRYRL*KDYIKTDEEIFPC*TRRRNERRRLFV  15677

Range 5: 15197 to 15379 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
44.6 bits(91) 0.0 26/61(43%) 0/61(0%) Minus/Plus
Query      320  YHRRLCSLIV*ATILNAVYATTNLMWGEKWCLLGNISEVEE*KSPRGRITPQTIGTSRRM*  502
                + RRLC  +   T  NA   TTN +WG K  LL +IS  +  +  + R T  TIG SRR+*
Subject  15197  FRRRLC**MRGVTTTNAACVTTNRIWGGKLFLLRSISISKVSRLRQVRTTRPTIGMSRRI*  15379

Range 6: 15422 to 15679 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
42.8 bits(87) 0.0 35/86(41%) 0/86(0%) Minus/Plus
Query       20  IHLILRPT*QDCLRILIEYTK*QK*CQLIRTCTQDVFRQVNWT**I*GPSLFKARRYTLETCY*SR*RKVS*P*GKRL*V*TTHHC  277
                IH  LR   Q CLR  + Y +* +* Q I   T+  F ++N T* +*G   ++A   TLE  Y*+R*  +S    K  * *TT  C
Subject  15422  IHPTLRQMSQGCLRTGLVYIR*LR*FQ*I*ISTRAAFLRLN*T*CL*GRFSYRAEI*TLERLY*NR*GNLSLLD*KT**A*TTLRC  15679

Range 7: 15203 to 15358 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
39.6 bits(80) 0.0 23/52(44%) 0/52(0%) Plus/Minus
Query      341  NCLRCNSSPW*LLFLYLRYIS*QTPLLSPHKVCCGINRIQNSRLHY*RA*TT  496
                NC  C+S   *  +L   Y S*Q  L SP+ VCC   RI++S   +  A*TT
Subject  15203  NCWTCSSYLS*SRYLAY*YTS*QK*LPSPNTVCCDTRRIRSSHPSHSLA*TT  15358

Range 8: 15410 to 15634 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.4 bits(60) 0.0 28/75(37%) 0/75(0%) Plus/Minus
Query       65  GNFSSAALIARL*SISSCLE*RRTLYSSRPIYLPKNILGTGSNQLTLFLLFCIFY*NP*AVLLRRSEYKMN*PRF  289
                G  SS+ LI   *S+  C   + TL + R I   K+  G     L L  L  I+  +P*A L   SE +MN*  F
Subject  15410  GKISSSVLI*SF*SLYLCPVRKSTL*TLRSI*PQKSSPGRDLYLLKLS*LSYIYESSP*ATL*HLSECRMN*Q*F  15634

Grapevine leafroll associated virus 3 isolate 6 102 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130301.1 Length: 4711 Number of Matches: 7

Range 1: 1361 to 1846 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
300.3 bits(649) 0.0 120/162(74%) 0/162(0%) Minus/Plus
Query       18  VSSSFMLVNSVGDYFECGLCHNKPYVGREVVFARKYIGGRGIEVTTGKNYTSNNWNESSYVINVTIKNGIARTVVNSSYTQTDVTGLPKDFNRIYKITKIVSVDSNLYPGCFSASKLDVMNIRSVSIQGKTIYFRDVLLKPLKKSFLALRETALGIDDSSLL  503
                VSSSFML+N  GDYFECG+CHNKPY+GREV+F RKYIGGRG+E+TTGKNYTSNNWNE+SYVI V + +G+A+T VNS+YTQTDV+GLPK++ RIYKITKIVSVD NLYPGCFS SKL VM IRS+S+    I+FRD+LLKPLKKSF A  E  L IDD+SLL
Subject   1361  VSSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKYIGGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLSVSPVRIFFRDILLKPLKKSFNARIEDVLNIDDTSLL  1846

Range 2: 1363 to 1845 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
187.1 bits(402) 0.0 96/161(60%) 0/161(0%) Plus/Minus
Query       19  NNDESSIPKAVSLKARKLFFSGFNSTSLKYIVLP*IETDLIFITSNLLAEKHPGYRFESTDTIFVILYILLKSLGSPVTSV*V*DELTTVRAIPFFIVTLITYDDSFQLFEV*FFPVVTSIPLPPIYFLANTTSLPT*GLLWHKPHSK*SPTLLTSINDDD  501
                NND SSI    S+ A   FF GFN  SLK +     ++DLI IT +  +EK PG RF STDTIFVIL I ++ LG P+TSV V* ELT V A P    T ITYD SFQLF+V*F PVV S PLPP+YFL   TS P *GLL H PHSK*SP    SINDDD
Subject   1363  NNDVSSIFSTSSILALNDFFKGFNKISLKKMRTGETDSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTVVCANPSTTFTCITYDASFQLFDV*FLPVVISTPLPPMYFLQKITSRPK*GLL*HTPHSK*SPASFISINDDD  1845

Range 3: 1361 to 1729 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.0 bits(238) 0.0 52/123(42%) 0/123(0%) Plus/Minus
Query      135  PYIHHVQFTCRKTSWVQVRIN*HYFCYFVYSIKILRQSCYVGLSIR*INHGSRYPVLYSHIDYIRRLVPIV*GVILPRGDFYSSTSDIFPSKHHFSPHIRFVVA*TAFKIVAYTINEHKRR*Y  503
                PY H+ QF   +T+ V+V I  HY CYFV +  I   +  V L I  IN G   P+ Y H+ Y+RRLVPIV  V+L  GD +SS + +FP++ +F   + FVV   A ++++  +++HKRR*Y
Subject   1361  PYTHYTQFRV*ETTRVEVLIYGHYLCYFVDTRPIFG*TTNVRLRISRINSGLC*PIDYVHLYYVRRLVPIVRRVVLTSGDLHSSPTYVFPTEDNFPS*VGFVVTHAALEVISRVVHQHKRR*Y  1729

Range 4: 1363 to 1611 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.9 bits(120) 0.0 37/83(45%) 0/83(0%) Minus/Plus
Query      253  IIVVYAR**CRRLF*MRFMPQQTLCGERSGVC*EIYRR*RNRSHHGEELHLKQLERVVVCNQCDYKERDSANRG*FILYSDRR  501
                IIVVYA     RL  +R + QQTL    S + *EI+R  R+  HH  ELH++QLER VV N  +     S +  *F LY++ R
Subject   1363  IIVVYADERRGRLLRVRRVSQQTLLRTGSYLL*EIHRWERSGDHHW*ELHVEQLERGVVRNTSERSRWVSTDHC*FYLYANGR  1611

Range 5: 1644 to 1844 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.2 bits(77) 0.0 27/67(40%) 0/67(0%) Minus/Plus
Query       20  TK*QK*CQLIRTCTQDVFRQVNWT**I*GPSLFKARRYTLETCY*SR*RKVS*P*GKRL*V*TTHHC  220
                TK*Q+*C  IRT T  V +  NW * +*G   F     +L   Y*+ *R  S    +  *+ TT  C
Subject   1644  TK*QR*CP*IRTSTLVVSQTRNWV*CV*GHCQFPQCASSLGISY*NL*RNRSTQESRMC*ILTTRRC  1844

Range 6: 1407 to 1610 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
42.3 bits(86) 0.0 30/68(44%) 0/68(0%) Minus/Plus
Query      254  NAVYATTNLMWGEKWCLLGNISEVEE*KSPRGRITPQTIGTSRRM*SM*L*RTG*REPWLIHLILRPT  457
                +A   TTN     K   +GN    EE +SP  R T +TIGT RR *  * *  G*  P LI LI + T
Subject   1407  SAACVTTNPT*DGKLSSVGNT*VGEEWRSPLVRTTRRTIGTRRRT*YK*T*SMG*HRPLLILLIRKRT  1610

Range 7: 1642 to 1848 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.1 bits(68) 0.0 22/69(32%) 0/69(0%) Minus/Plus
Query       16  IQNNKNSVS*FEPVPRMFFGK*IGRDEYKVRLYSRQDDIL*RRAIKAAEEKFPSLKGNGFRYRRLIIVA  222
                +QNNK+SV   EP+P +F     G + YKV +      +L*   I+  EE           Y R ++V+
Subject   1642  LQNNKDSVRRSEPLPWLFLRLETGCNAYKVTVSFPSAHLL*GYLIETFEEIVQRKNRGCAEY*RHVVVS  1848

Grapevine leafroll associated virus 3 isolate 6 114 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130303.1 Length: 4711 Number of Matches: 7

Range 1: 1361 to 1846 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
300.3 bits(649) 0.0 120/162(74%) 0/162(0%) Minus/Plus
Query       18  VSSSFMLVNSVGDYFECGLCHNKPYVGREVVFARKYIGGRGIEVTTGKNYTSNNWNESSYVINVTIKNGIARTVVNSSYTQTDVTGLPKDFNRIYKITKIVSVDSNLYPGCFSASKLDVMNIRSVSIQGKTIYFRDVLLKPLKKSFLALRETALGIDDSSLL  503
                VSSSFML+N  GDYFECG+CHNKPY+GREV+F RKYIGGRG+E+TTGKNYTSNNWNE+SYVI V + +G+A+T VNS+YTQTDV+GLPK++ RIYKITKIVSVD NLYPGCFS SKL VM IRS+S+    I+FRD+LLKPLKKSF A  E  L IDD+SLL
Subject   1361  VSSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKYIGGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLSVSPVRIFFRDILLKPLKKSFNARIEDVLNIDDTSLL  1846

Range 2: 1363 to 1845 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
187.1 bits(402) 0.0 96/161(60%) 0/161(0%) Plus/Minus
Query       19  NNDESSIPKAVSLKARKLFFSGFNSTSLKYIVLP*IETDLIFITSNLLAEKHPGYRFESTDTIFVILYILLKSLGSPVTSV*V*DELTTVRAIPFFIVTLITYDDSFQLFEV*FFPVVTSIPLPPIYFLANTTSLPT*GLLWHKPHSK*SPTLLTSINDDD  501
                NND SSI    S+ A   FF GFN  SLK +     ++DLI IT +  +EK PG RF STDTIFVIL I ++ LG P+TSV V* ELT V A P    T ITYD SFQLF+V*F PVV S PLPP+YFL   TS P *GLL H PHSK*SP    SINDDD
Subject   1363  NNDVSSIFSTSSILALNDFFKGFNKISLKKMRTGETDSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTVVCANPSTTFTCITYDASFQLFDV*FLPVVISTPLPPMYFLQKITSRPK*GLL*HTPHSK*SPASFISINDDD  1845

Range 3: 1361 to 1729 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.0 bits(238) 0.0 52/123(42%) 0/123(0%) Plus/Minus
Query      135  PYIHHVQFTCRKTSWVQVRIN*HYFCYFVYSIKILRQSCYVGLSIR*INHGSRYPVLYSHIDYIRRLVPIV*GVILPRGDFYSSTSDIFPSKHHFSPHIRFVVA*TAFKIVAYTINEHKRR*Y  503
                PY H+ QF   +T+ V+V I  HY CYFV +  I   +  V L I  IN G   P+ Y H+ Y+RRLVPIV  V+L  GD +SS + +FP++ +F   + FVV   A ++++  +++HKRR*Y
Subject   1361  PYTHYTQFRV*ETTRVEVLIYGHYLCYFVDTRPIFG*TTNVRLRISRINSGLC*PIDYVHLYYVRRLVPIVRRVVLTSGDLHSSPTYVFPTEDNFPS*VGFVVTHAALEVISRVVHQHKRR*Y  1729

Range 4: 1363 to 1611 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.9 bits(120) 0.0 37/83(45%) 0/83(0%) Minus/Plus
Query      253  IIVVYAR**CRRLF*MRFMPQQTLCGERSGVC*EIYRR*RNRSHHGEELHLKQLERVVVCNQCDYKERDSANRG*FILYSDRR  501
                IIVVYA     RL  +R + QQTL    S + *EI+R  R+  HH  ELH++QLER VV N  +     S +  *F LY++ R
Subject   1363  IIVVYADERRGRLLRVRRVSQQTLLRTGSYLL*EIHRWERSGDHHW*ELHVEQLERGVVRNTSERSRWVSTDHC*FYLYANGR  1611

Range 5: 1644 to 1844 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.2 bits(77) 0.0 27/67(40%) 0/67(0%) Minus/Plus
Query       20  TK*QK*CQLIRTCTQDVFRQVNWT**I*GPSLFKARRYTLETCY*SR*RKVS*P*GKRL*V*TTHHC  220
                TK*Q+*C  IRT T  V +  NW * +*G   F     +L   Y*+ *R  S    +  *+ TT  C
Subject   1644  TK*QR*CP*IRTSTLVVSQTRNWV*CV*GHCQFPQCASSLGISY*NL*RNRSTQESRMC*ILTTRRC  1844

Range 6: 1407 to 1610 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
42.3 bits(86) 0.0 30/68(44%) 0/68(0%) Minus/Plus
Query      254  NAVYATTNLMWGEKWCLLGNISEVEE*KSPRGRITPQTIGTSRRM*SM*L*RTG*REPWLIHLILRPT  457
                +A   TTN     K   +GN    EE +SP  R T +TIGT RR *  * *  G*  P LI LI + T
Subject   1407  SAACVTTNPT*DGKLSSVGNT*VGEEWRSPLVRTTRRTIGTRRRT*YK*T*SMG*HRPLLILLIRKRT  1610

Range 7: 1642 to 1848 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.1 bits(68) 0.0 22/69(32%) 0/69(0%) Minus/Plus
Query       16  IQNNKNSVS*FEPVPRMFFGK*IGRDEYKVRLYSRQDDIL*RRAIKAAEEKFPSLKGNGFRYRRLIIVA  222
                +QNNK+SV   EP+P +F     G + YKV +      +L*   I+  EE           Y R ++V+
Subject   1642  LQNNKDSVRRSEPLPWLFLRLETGCNAYKVTVSFPSAHLL*GYLIETFEEIVQRKNRGCAEY*RHVVVS  1848

Nucleotide Sequence (450 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
45
90
135
180
225
270
315
360
405
450

Descriptions

Alignments

Grapevine leafroll associated virus 3 isolate GH24, complete genome

Sequence ID: KM058745.1 Length: 18493 Number of Matches: 7

Range 1: 8388 to 8828 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
343.8 bits(744) 0.0 146/147(99%) 0/147(0%) Minus/Plus
Query        3  QDHDEGACAVCWIAKAEWWSKHLVR**YRSLYFAVRCT*GSRLRLCGHKRR**SYF*PAAFRRRHIGFK**FWL*CEDV*SSCSIFLL*VYGPGG*RFVFRSRPVETLREIWSVKNI*YRSFA*DFSVFCGSVEGP*SGGRYSSPLP  443
                QDHDEGACAVCWIAKAEWWSKHLVR**YRSLYFAVRCT*GSRLRLCGHKRR**SYF*PAAFRRRHIGFK**FWL*CEDV*SSCSIFLL*VYGPGG*RFVFRSRPVETLREIWSVKNI*YRSFA*DFSVFCGSVEGP*SGGRYSSP P
Subject   8388  QDHDEGACAVCWIAKAEWWSKHLVR**YRSLYFAVRCT*GSRLRLCGHKRR**SYF*PAAFRRRHIGFK**FWL*CEDV*SSCSIFLL*VYGPGG*RFVFRSRPVETLREIWSVKNI*YRSFA*DFSVFCGSVEGP*SGGRYSSPYP  8828

Range 2: 8384 to 8827 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
343.8 bits(744) 0.0 146/148(99%) 0/148(0%) Plus/Minus
Query        4  GKGLE*RPPD*GPSTDPQKTEKSHAKDLYQMFLTLQISRRVSTGRERKTNRHPPGP*T*SKNMEQLD*TSSHQSQNYHLKPMCRRLKAAG*K*DYHRRL*PHNRNLDP*VQRTAKYKERYYYLTKCLLHHSAFAIQQTAQAPSSWS*K  447
                G GLE*RPPD*GPSTDPQKTEKSHAKDLYQMFLTLQISRRVSTGRERKTNRHPPGP*T*SKNMEQLD*TSSHQSQNYHLKPMCRRLKAAG*K*DYHRRL*PHNRNLDP*VQRTAKYKERYYYLTKCLLHHSAFAIQQTAQAPSSWS*+
Subject   8384  G*GLE*RPPD*GPSTDPQKTEKSHAKDLYQMFLTLQISRRVSTGRERKTNRHPPGP*T*SKNMEQLD*TSSHQSQNYHLKPMCRRLKAAG*K*DYHRRL*PHNRNLDP*VQRTAKYKERYYYLTKCLLHHSAFAIQQTAQAPSSWS*Q  8827

Range 3: 8389 to 8823 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
340.6 bits(737) 0.0 145/145(100%) 0/145(0%) Minus/Plus
Query        8  RTMTKELVLSVGSQRRSGGANTWLGNSIVLCTLLSVVLRGLDYDYVVISGDDSLIFSRQPLDVDTSVLSDNFGFDVKMFNQAAPYFCSKFMVQVDDGLFFVPDPLKLFVKFGASKTSDIDLLHEIFQSFVDLSKGLNREDVIQAL  442
                RTMTKELVLSVGSQRRSGGANTWLGNSIVLCTLLSVVLRGLDYDYVVISGDDSLIFSRQPLDVDTSVLSDNFGFDVKMFNQAAPYFCSKFMVQVDDGLFFVPDPLKLFVKFGASKTSDIDLLHEIFQSFVDLSKGLNREDVIQAL
Subject   8389  RTMTKELVLSVGSQRRSGGANTWLGNSIVLCTLLSVVLRGLDYDYVVISGDDSLIFSRQPLDVDTSVLSDNFGFDVKMFNQAAPYFCSKFMVQVDDGLFFVPDPLKLFVKFGASKTSDIDLLHEIFQSFVDLSKGLNREDVIQAL  8823

Range 4: 8384 to 8821 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
334.2 bits(723) 0.0 146/146(100%) 0/146(0%) Minus/Plus
Query       10  LSGP*RRSLCCLLDRKGGVVEQTLG*VIVSFFVLCCPLYLGV*ITIMWS*AAMIVLFLAGSL*TSTHRF*VIILALM*RCLIKLLHIFALSLWSRWMTVCFSFPTR*NSS*NLERQKHLI*IFCMRFFSLLWICRRALIGRTLFKP  447
                LSGP*RRSLCCLLDRKGGVVEQTLG*VIVSFFVLCCPLYLGV*ITIMWS*AAMIVLFLAGSL*TSTHRF*VIILALM*RCLIKLLHIFALSLWSRWMTVCFSFPTR*NSS*NLERQKHLI*IFCMRFFSLLWICRRALIGRTLFKP
Subject   8384  LSGP*RRSLCCLLDRKGGVVEQTLG*VIVSFFVLCCPLYLGV*ITIMWS*AAMIVLFLAGSL*TSTHRF*VIILALM*RCLIKLLHIFALSLWSRWMTVCFSFPTR*NSS*NLERQKHLI*IFCMRFFSLLWICRRALIGRTLFKP  8821

Range 5: 8383 to 8823 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
311.3 bits(673) 0.0 145/147(99%) 0/147(0%) Plus/Minus
Query        8  KGLNNVLPIKALRQIHKRLKNLMQKIYIRCF*RSKFHEEFQRVGNEKQTVIHLDHKLRAKIWSSXXXXXXXXXXXXT*NRCVDV*RLPAKNKTIIAAYDHIIVI*TPKYNGQQSTKNDTIT*PSVCSTTPPLRSNRQHKLLRHGPES  448
                KGLNNVLPIKALRQIHKRLKNLMQKIYIRCF*RSKFHEEFQRVGNEKQTVIHLDHKLRAKIWSSLIKHLHIKAKIIT*NRCVDV*RLPAKNKTIIAAYDHIIVI*TPKYNGQQSTKNDTIT*PSVCSTTPPLRSNRQHKLLRHGP++
Subject   8383  KGLNNVLPIKALRQIHKRLKNLMQKIYIRCF*RSKFHEEFQRVGNEKQTVIHLDHKLRAKIWSSLIKHLHIKAKIIT*NRCVDV*RLPAKNKTIIAAYDHIIVI*TPKYNGQQSTKNDTIT*PSVCSTTPPLRSNRQHKLLRHGPDN  8823

Range 6: 8550 to 8822 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
210.9 bits(454) 0.0 91/91(100%) 0/91(0%) Plus/Minus
Query        9  RA*ITSSRLRPFDRSTKD*KISCKRSISDVFDAPNFTKSFNGSGTKNKPSSTWTINLEQKYGAA*LNIFTSKPKLSLKTDVSTSKGCRLKI  281
                RA*ITSSRLRPFDRSTKD*KISCKRSISDVFDAPNFTKSFNGSGTKNKPSSTWTINLEQKYGAA*LNIFTSKPKLSLKTDVSTSKGCRLKI
Subject   8550  RA*ITSSRLRPFDRSTKD*KISCKRSISDVFDAPNFTKSFNGSGTKNKPSSTWTINLEQKYGAA*LNIFTSKPKLSLKTDVSTSKGCRLKI  8822

Range 7: 8388 to 8486 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.9 bits(168) 0.0 33/33(100%) 0/33(0%) Plus/Minus
Query      345  KVQRTILLPNQVFAPPLRLCDPTDSTSSFVMVL  443
                KVQRTILLPNQVFAPPLRLCDPTDSTSSFVMVL
Subject   8388  KVQRTILLPNQVFAPPLRLCDPTDSTSSFVMVL  8486

Grapevine leafroll associated virus 3 isolate Tempr RNA dependent RNA polymerase (ORF1b) gene, partial cds

Sequence ID: DQ314610.1 Length: 1807 Number of Matches: 7

Range 1: 944 to 1387 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
343.8 bits(744) 0.0 146/148(99%) 0/148(0%) Plus/Minus
Query        4  GKGLE*RPPD*GPSTDPQKTEKSHAKDLYQMFLTLQISRRVSTGRERKTNRHPPGP*T*SKNMEQLD*TSSHQSQNYHLKPMCRRLKAAG*K*DYHRRL*PHNRNLDP*VQRTAKYKERYYYLTKCLLHHSAFAIQQTAQAPSSWS*K  447
                G GLE*RPPD*GPSTDPQKTEKSHAKDLYQMFLTLQISRRVSTGRERKTNRHPPGP*T*SKNMEQLD*TSSHQSQNYHLKPMCRRLKAAG*K*DYHRRL*PHNRNLDP*VQRTAKYKERYYYLTKCLLHHSAFAIQQTAQAPSSWS*+
Subject    944  G*GLE*RPPD*GPSTDPQKTEKSHAKDLYQMFLTLQISRRVSTGRERKTNRHPPGP*T*SKNMEQLD*TSSHQSQNYHLKPMCRRLKAAG*K*DYHRRL*PHNRNLDP*VQRTAKYKERYYYLTKCLLHHSAFAIQQTAQAPSSWS*Q  1387

Range 2: 948 to 1388 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
343.8 bits(744) 0.0 146/147(99%) 0/147(0%) Minus/Plus
Query        3  QDHDEGACAVCWIAKAEWWSKHLVR**YRSLYFAVRCT*GSRLRLCGHKRR**SYF*PAAFRRRHIGFK**FWL*CEDV*SSCSIFLL*VYGPGG*RFVFRSRPVETLREIWSVKNI*YRSFA*DFSVFCGSVEGP*SGGRYSSPLP  443
                QDHDEGACAVCWIAKAEWWSKHLVR**YRSLYFAVRCT*GSRLRLCGHKRR**SYF*PAAFRRRHIGFK**FWL*CEDV*SSCSIFLL*VYGPGG*RFVFRSRPVETLREIWSVKNI*YRSFA*DFSVFCGSVEGP*SGGRYSSP P
Subject    948  QDHDEGACAVCWIAKAEWWSKHLVR**YRSLYFAVRCT*GSRLRLCGHKRR**SYF*PAAFRRRHIGFK**FWL*CEDV*SSCSIFLL*VYGPGG*RFVFRSRPVETLREIWSVKNI*YRSFA*DFSVFCGSVEGP*SGGRYSSPYP  1388

Range 3: 949 to 1383 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
340.6 bits(737) 0.0 145/145(100%) 0/145(0%) Minus/Plus
Query        8  RTMTKELVLSVGSQRRSGGANTWLGNSIVLCTLLSVVLRGLDYDYVVISGDDSLIFSRQPLDVDTSVLSDNFGFDVKMFNQAAPYFCSKFMVQVDDGLFFVPDPLKLFVKFGASKTSDIDLLHEIFQSFVDLSKGLNREDVIQAL  442
                RTMTKELVLSVGSQRRSGGANTWLGNSIVLCTLLSVVLRGLDYDYVVISGDDSLIFSRQPLDVDTSVLSDNFGFDVKMFNQAAPYFCSKFMVQVDDGLFFVPDPLKLFVKFGASKTSDIDLLHEIFQSFVDLSKGLNREDVIQAL
Subject    949  RTMTKELVLSVGSQRRSGGANTWLGNSIVLCTLLSVVLRGLDYDYVVISGDDSLIFSRQPLDVDTSVLSDNFGFDVKMFNQAAPYFCSKFMVQVDDGLFFVPDPLKLFVKFGASKTSDIDLLHEIFQSFVDLSKGLNREDVIQAL  1383

Range 4: 944 to 1381 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
334.2 bits(723) 0.0 146/146(100%) 0/146(0%) Minus/Plus
Query       10  LSGP*RRSLCCLLDRKGGVVEQTLG*VIVSFFVLCCPLYLGV*ITIMWS*AAMIVLFLAGSL*TSTHRF*VIILALM*RCLIKLLHIFALSLWSRWMTVCFSFPTR*NSS*NLERQKHLI*IFCMRFFSLLWICRRALIGRTLFKP  447
                LSGP*RRSLCCLLDRKGGVVEQTLG*VIVSFFVLCCPLYLGV*ITIMWS*AAMIVLFLAGSL*TSTHRF*VIILALM*RCLIKLLHIFALSLWSRWMTVCFSFPTR*NSS*NLERQKHLI*IFCMRFFSLLWICRRALIGRTLFKP
Subject    944  LSGP*RRSLCCLLDRKGGVVEQTLG*VIVSFFVLCCPLYLGV*ITIMWS*AAMIVLFLAGSL*TSTHRF*VIILALM*RCLIKLLHIFALSLWSRWMTVCFSFPTR*NSS*NLERQKHLI*IFCMRFFSLLWICRRALIGRTLFKP  1381

Range 5: 943 to 1383 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
311.3 bits(673) 0.0 145/147(99%) 0/147(0%) Plus/Minus
Query        8  KGLNNVLPIKALRQIHKRLKNLMQKIYIRCF*RSKFHEEFQRVGNEKQTVIHLDHKLRAKIWSSXXXXXXXXXXXXT*NRCVDV*RLPAKNKTIIAAYDHIIVI*TPKYNGQQSTKNDTIT*PSVCSTTPPLRSNRQHKLLRHGPES  448
                KGLNNVLPIKALRQIHKRLKNLMQKIYIRCF*RSKFHEEFQRVGNEKQTVIHLDHKLRAKIWSSLIKHLHIKAKIIT*NRCVDV*RLPAKNKTIIAAYDHIIVI*TPKYNGQQSTKNDTIT*PSVCSTTPPLRSNRQHKLLRHGP++
Subject    943  KGLNNVLPIKALRQIHKRLKNLMQKIYIRCF*RSKFHEEFQRVGNEKQTVIHLDHKLRAKIWSSLIKHLHIKAKIIT*NRCVDV*RLPAKNKTIIAAYDHIIVI*TPKYNGQQSTKNDTIT*PSVCSTTPPLRSNRQHKLLRHGPDN  1383

Range 6: 1110 to 1382 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
210.9 bits(454) 0.0 91/91(100%) 0/91(0%) Plus/Minus
Query        9  RA*ITSSRLRPFDRSTKD*KISCKRSISDVFDAPNFTKSFNGSGTKNKPSSTWTINLEQKYGAA*LNIFTSKPKLSLKTDVSTSKGCRLKI  281
                RA*ITSSRLRPFDRSTKD*KISCKRSISDVFDAPNFTKSFNGSGTKNKPSSTWTINLEQKYGAA*LNIFTSKPKLSLKTDVSTSKGCRLKI
Subject   1110  RA*ITSSRLRPFDRSTKD*KISCKRSISDVFDAPNFTKSFNGSGTKNKPSSTWTINLEQKYGAA*LNIFTSKPKLSLKTDVSTSKGCRLKI  1382

Range 7: 948 to 1046 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.9 bits(168) 0.0 33/33(100%) 0/33(0%) Plus/Minus
Query      345  KVQRTILLPNQVFAPPLRLCDPTDSTSSFVMVL  443
                KVQRTILLPNQVFAPPLRLCDPTDSTSSFVMVL
Subject    948  KVQRTILLPNQVFAPPLRLCDPTDSTSSFVMVL  1046

Grapevine leafroll associated virus 3 isolate CB19 RNA polymerase gene, partial cds

Sequence ID: EF445656.1 Length: 602 Number of Matches: 7

Range 1: 135 to 569 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
340.6 bits(737) 0.0 145/145(100%) 0/145(0%) Minus/Plus
Query        8  RTMTKELVLSVGSQRRSGGANTWLGNSIVLCTLLSVVLRGLDYDYVVISGDDSLIFSRQPLDVDTSVLSDNFGFDVKMFNQAAPYFCSKFMVQVDDGLFFVPDPLKLFVKFGASKTSDIDLLHEIFQSFVDLSKGLNREDVIQAL  442
                RTMTKELVLSVGSQRRSGGANTWLGNSIVLCTLLSVVLRGLDYDYVVISGDDSLIFSRQPLDVDTSVLSDNFGFDVKMFNQAAPYFCSKFMVQVDDGLFFVPDPLKLFVKFGASKTSDIDLLHEIFQSFVDLSKGLNREDVIQAL
Subject    135  RTMTKELVLSVGSQRRSGGANTWLGNSIVLCTLLSVVLRGLDYDYVVISGDDSLIFSRQPLDVDTSVLSDNFGFDVKMFNQAAPYFCSKFMVQVDDGLFFVPDPLKLFVKFGASKTSDIDLLHEIFQSFVDLSKGLNREDVIQAL  569

Range 2: 134 to 574 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
339.7 bits(735) 0.0 144/147(98%) 0/147(0%) Minus/Plus
Query        3  QDHDEGACAVCWIAKAEWWSKHLVR**YRSLYFAVRCT*GSRLRLCGHKRR**SYF*PAAFRRRHIGFK**FWL*CEDV*SSCSIFLL*VYGPGG*RFVFRSRPVETLREIWSVKNI*YRSFA*DFSVFCGSVEGP*SGGRYSSPLP  443
                QDHDEGACAVCWIAKAEWWSKHLVR**YRSLYFAVRCT*GSRLRLCGHKRR**SYF*PAAFRRRHIGFK**FWL CEDV*SSCSIFLL*VYGPGG*RFVFRSRPVETLREIWSV+NI*YRSFA*DFSVFCGSVEGP*SGGRYSSP P
Subject    134  QDHDEGACAVCWIAKAEWWSKHLVR**YRSLYFAVRCT*GSRLRLCGHKRR**SYF*PAAFRRRHIGFK**FWLRCEDV*SSCSIFLL*VYGPGG*RFVFRSRPVETLREIWSVENI*YRSFA*DFSVFCGSVEGP*SGGRYSSPYP  574

Range 3: 130 to 573 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
339.2 bits(734) 0.0 144/148(97%) 0/148(0%) Plus/Minus
Query        4  GKGLE*RPPD*GPSTDPQKTEKSHAKDLYQMFLTLQISRRVSTGRERKTNRHPPGP*T*SKNMEQLD*TSSHQSQNYHLKPMCRRLKAAG*K*DYHRRL*PHNRNLDP*VQRTAKYKERYYYLTKCLLHHSAFAIQQTAQAPSSWS*K  447
                G GLE*RPPD*GPSTDPQKTEKSHAKDLYQMF TLQISRRVSTGRERKTNRHPPGP*T*SKNMEQLD*TSSH+SQNYHLKPMCRRLKAAG*K*DYHRRL*PHNRNLDP*VQRTAKYKERYYYLTKCLLHHSAFAIQQTAQAPSSWS*+
Subject    130  G*GLE*RPPD*GPSTDPQKTEKSHAKDLYQMFSTLQISRRVSTGRERKTNRHPPGP*T*SKNMEQLD*TSSHRSQNYHLKPMCRRLKAAG*K*DYHRRL*PHNRNLDP*VQRTAKYKERYYYLTKCLLHHSAFAIQQTAQAPSSWS*Q  573

Range 4: 130 to 567 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
329.6 bits(713) 0.0 144/146(99%) 0/146(0%) Minus/Plus
Query       10  LSGP*RRSLCCLLDRKGGVVEQTLG*VIVSFFVLCCPLYLGV*ITIMWS*AAMIVLFLAGSL*TSTHRF*VIILALM*RCLIKLLHIFALSLWSRWMTVCFSFPTR*NSS*NLERQKHLI*IFCMRFFSLLWICRRALIGRTLFKP  447
                LSGP*RRSLCCLLDRKGGVVEQTLG*VIVSFFVLCCPLYLGV*ITIMWS*AAMIVLFLAGSL*TSTHRF*VIILA M*RCLIKLLHIFALSLWSRWMTVCFSFPTR*NSS*NLER+KHLI*IFCMRFFSLLWICRRALIGRTLFKP
Subject    130  LSGP*RRSLCCLLDRKGGVVEQTLG*VIVSFFVLCCPLYLGV*ITIMWS*AAMIVLFLAGSL*TSTHRF*VIILASM*RCLIKLLHIFALSLWSRWMTVCFSFPTR*NSS*NLERRKHLI*IFCMRFFSLLWICRRALIGRTLFKP  567

Range 5: 129 to 569 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
309.0 bits(668) 0.0 143/147(97%) 0/147(0%) Plus/Minus
Query        8  KGLNNVLPIKALRQIHKRLKNLMQKIYIRCF*RSKFHEEFQRVGNEKQTVIHLDHKLRAKIWSSXXXXXXXXXXXXT*NRCVDV*RLPAKNKTIIAAYDHIIVI*TPKYNGQQSTKNDTIT*PSVCSTTPPLRSNRQHKLLRHGPES  448
                KGLNNVLPIKALRQIHKRLKNLMQKIYIRCF RSKFHEEFQRVGNEKQTVIHLDHKLRAKIWSSLIKHLHI+AKIIT*NRCVDV*RLPAKNKTIIAAYDHIIVI*TPKYNGQQSTKNDTIT*PSVCSTTPPLRSNRQHKLLRHGP++
Subject    129  KGLNNVLPIKALRQIHKRLKNLMQKIYIRCFRRSKFHEEFQRVGNEKQTVIHLDHKLRAKIWSSLIKHLHIEAKIIT*NRCVDV*RLPAKNKTIIAAYDHIIVI*TPKYNGQQSTKNDTIT*PSVCSTTPPLRSNRQHKLLRHGPDN  569

Range 6: 296 to 568 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
210.9 bits(454) 0.0 91/91(100%) 0/91(0%) Plus/Minus
Query        9  RA*ITSSRLRPFDRSTKD*KISCKRSISDVFDAPNFTKSFNGSGTKNKPSSTWTINLEQKYGAA*LNIFTSKPKLSLKTDVSTSKGCRLKI  281
                RA*ITSSRLRPFDRSTKD*KISCKRSISDVFDAPNFTKSFNGSGTKNKPSSTWTINLEQKYGAA*LNIFTSKPKLSLKTDVSTSKGCRLKI
Subject    296  RA*ITSSRLRPFDRSTKD*KISCKRSISDVFDAPNFTKSFNGSGTKNKPSSTWTINLEQKYGAA*LNIFTSKPKLSLKTDVSTSKGCRLKI  568

Range 7: 134 to 232 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.9 bits(168) 0.0 33/33(100%) 0/33(0%) Plus/Minus
Query      345  KVQRTILLPNQVFAPPLRLCDPTDSTSSFVMVL  443
                KVQRTILLPNQVFAPPLRLCDPTDSTSSFVMVL
Subject    134  KVQRTILLPNQVFAPPLRLCDPTDSTSSFVMVL  232

Grapevine leafroll associated virus 3 isolate LN, complete genome

Sequence ID: JQ423939.1 Length: 18563 Number of Matches: 9

Range 1: 8454 to 8888 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
325.9 bits(705) 0.0 134/145(92%) 0/145(0%) Minus/Plus
Query        8  RTMTKELVLSVGSQRRSGGANTWLGNSIVLCTLLSVVLRGLDYDYVVISGDDSLIFSRQPLDVDTSVLSDNFGFDVKMFNQAAPYFCSKFMVQVDDGLFFVPDPLKLFVKFGASKTSDIDLLHEIFQSFVDLSKGLNREDVIQAL  442
                RTMTKELVLSVGSQRRSGGANTWLGNS++LCTLLSVVLRGLDY Y+V+SGDDSLIFSRQPLD+DTSVLSDNFGFDVK+FNQAAPYFCSKF+VQV+DGLFFVPDPLKLFVKFGASKTSDIDLLHEIFQSFVDLSKG NREDVIQ L
Subject   8454  RTMTKELVLSVGSQRRSGGANTWLGNSLILCTLLSVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKVFNQAAPYFCSKFLVQVEDGLFFVPDPLKLFVKFGASKTSDIDLLHEIFQSFVDLSKGFNREDVIQEL  8888

Range 2: 8615 to 8878 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
146.8 bits(314) 0.0 64/88(73%) 0/88(0%) Plus/Minus
Query       18  ITSSRLRPFDRSTKD*KISCKRSISDVFDAPNFTKSFNGSGTKNKPSSTWTINLEQKYGAA*LNIFTSKPKLSLKTDVSTSKGCRLKI  281
                +TSS L+PF+RSTKD* ISCKRS+S+V +APN TKS +GSGTK +PSST T NLEQK GAA LN FTSKPKLSL+TDVS S GCRL +
Subject   8615  MTSSLLKPFERSTKD*NISCKRSMSEVLEAPNLTKSLSGSGTKKRPSST*TKNLEQK*GAAWLNTFTSKPKLSLRTDVSISNGCRLNM  8878

Range 3: 8453 to 8551 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.9 bits(107) 0.0 21/33(64%) 0/33(0%) Plus/Minus
Query      345  KVQRTILLPNQVFAPPLRLCDPTDSTSSFVMVL  443
                KV +  L PN V APPLRL +PTD+T+SFV+VL
Subject   8453  KVHKIKLFPNHVLAPPLRLWEPTDNTNSFVIVL  8551

Range 4: 8448 to 8654 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
81.7 bits(172) 0.0 37/69(54%) 0/69(0%) Plus/Minus
Query      242  NRCVDV*RLPAKNKTIIAAYDHIIVI*TPKYNGQQSTKNDTIT*PSVCSTTPPLRSNRQHKLLRHGPES  448
                +R +D+*RLP K + IIAA   I +I*+PKY GQQ T++ TI *P V +TT PL ++ QH+LLRH P +
Subject   8448  DRRIDI*RLPTKYEAIIAANYDIAII*SPKYYGQQGTQD*TIP*PRVSTTTAPLGADGQHQLLRHRPHN  8654

Range 5: 8697 to 8882 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.3 bits(147) 0.0 32/62(52%) 0/62(0%) Plus/Minus
Query       14  LNNVLPIKALRQIHKRLKNLMQKIYIRCF*RSKFHEEFQRVGNEKQTVIHLDHKLRAKIWSS  199
                L++VL I+ LR+I +RLK LMQK+ +  F  SK +EEF+ +GN+K+T++ L+ KLR KI SS
Subject   8697  LDDVLSIETLRKIDERLKYLMQKVDV*SFGSSKLNEEFKWIGNKKETILDLN*KLRTKIRSS  8882

Range 6: 8453 to 8857 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.9 bits(240) 0.0 61/135(45%) 0/135(0%) Minus/Plus
Query       39  QDHDEGACAVCWIAKAEWWSKHLVR**YRSLYFAVRCT*GSRLRLCGHKRR**SYF*PAAFRRRHIGFK**FWL*CEDV*SSCSIFLL*VYGPGG*RFVFRSRPVETLREIWSVKNI*YRSFA*DFSVFCGSVEG  443
                +D DEG   V  + +A+WW  H+VR *+  +Y  VR T*G RL L    RR** + * AA R R++G + *FW * + +  SCS+FL *V+       +F SR   TLR +WS +N  +R FA*D S+F  S EG
Subject   8453  EDDDEGVGVVRRLPEAQWWC*HVVRE*FNLVYLVVRST*GIRL*LYRS*RR**PHI*SAAVRYRYVGPER*FWF*RKGIQPSCSLFLF*VFSSSRGWSLFCSRST*TLR*VWSFQNFRHRPFA*DISIFRRSFEG  8857

Range 7: 8455 to 8874 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
107.4 bits(228) 0.0 70/140(50%) 0/140(0%) Minus/Plus
Query       22  GP*RRSLCCLLDRKGGVVEQTLG*VIVSFFVLCCPLYLGV*ITIMWS*AAMIVLFLAGSL*TSTHRF*VIILALM*RCLIKLLHIFALSLWSRWMTVCFSFPTR*NSS*NLERQKHLI*IFCMRFFSLLWICRRALIGRT  441
                G *RRS CC    +G VV  T G* IV   V CCP YLG *I  +   AAMI  +L GS * S  R * IIL L *R   KLL IF LS   +   V F FP   NSS +LE  K     FCMR+F+L  I RR  I RT
Subject   8455  GR*RRSWCCPSAPRGAVVVLTRG*GIV*SCVPCCP*YLGD*IIAIS*LAAMIASYLVGSR*ISIRRS*AIILVLT*RYSTKLLLIFVLSF*FKSRMVSFLFPIHLNSSLSLELPKLQTSTFCMRYFNLSSIFRRVSIERT  8874

Range 8: 8455 to 8721 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.7 bits(161) 0.0 43/89(48%) 0/89(0%) Plus/Minus
Query      175  T*SKNMEQLD*TSSHQSQNYHLKPMCRRLKAAG*K*DYHRRL*PHNRNLDP*VQRTAKYKERYYYLTKCLLHHSAFAIQQTAQAPSSWS  441
                T*+KN EQL *    Q+QNY   P  R L AA * * YHRR   ++ NL P*V RT +Y    Y LT C  HH A   ++T   PSS S
Subject   8455  T*NKNKEQLG*IPLRQNQNYRSGPTYRYLTAAD*I*GYHRR*LRYSYNLIP*VLRTTRYTRLNYSLTTC*HHHCASGSRRTTPTPSSSS  8721

Range 9: 8749 to 8877 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.8 bits(74) 0.0 22/43(51%) 0/43(0%) Plus/Minus
Query       19  *RPPD*GPSTDPQKTEKSHAKDLYQMFLTLQISRRVSTGRERK  147
                *RP  * PS D +K E SHAK     F  LQ  RRV   RE+K
Subject   8749  *RPLY*NPSKDRRKIEISHAKGRCLKFWKLQT*RRV*VDREQK  8877

Grapevine leafroll associated virus 3 isolate GH11, complete genome

Sequence ID: JQ655295.1 Length: 18671 Number of Matches: 9

Range 1: 8389 to 8823 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
324.1 bits(701) 0.0 135/145(93%) 0/145(0%) Minus/Plus
Query        8  RTMTKELVLSVGSQRRSGGANTWLGNSIVLCTLLSVVLRGLDYDYVVISGDDSLIFSRQPLDVDTSVLSDNFGFDVKMFNQAAPYFCSKFMVQVDDGLFFVPDPLKLFVKFGASKTSDIDLLHEIFQSFVDLSKGLNREDVIQAL  442
                RTMTKELVLSVGSQRRSGGANTWLGNSIVLCTLLSVVLRGLDYDYVV+SGDDSLIFS++PLD+DT VLSDNFGFDVK+FNQAAPYFCSKF+VQVDD L+FVPDPLKLFVKFGASKTSDIDLLHEIFQSFVDLSKG NREDVIQAL
Subject   8389  RTMTKELVLSVGSQRRSGGANTWLGNSIVLCTLLSVVLRGLDYDYVVVSGDDSLIFSKRPLDIDTVVLSDNFGFDVKVFNQAAPYFCSKFLVQVDDDLYFVPDPLKLFVKFGASKTSDIDLLHEIFQSFVDLSKGFNREDVIQAL  8823

Range 2: 8550 to 8822 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
145.9 bits(312) 0.0 67/91(74%) 0/91(0%) Plus/Minus
Query        9  RA*ITSSRLRPFDRSTKD*KISCKRSISDVFDAPNFTKSFNGSGTKNKPSSTWTINLEQKYGAA*LNIFTSKPKLSLKTDVSTSKGCRLKI  281
                +A ITSS L+PFD+STKD*KISC RSISDV +APN T +F GSGTK + SST T NLEQKYGAA*LN FTSKPKLSL+T VS S G  LKI
Subject   8550  KACITSSLLKPFDKSTKD*KISCSRSISDVLEAPNLTNNFRGSGTKYRSSST*TKNLEQKYGAA*LNTFTSKPKLSLRTTVSISNGRLLKI  8822

Range 3: 8388 to 8486 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.1 bits(114) 0.0 22/33(67%) 0/33(0%) Plus/Minus
Query      345  KVQRTILLPNQVFAPPLRLCDPTDSTSSFVMVL  443
                +V +T+L PNQV APPLRL +PTD+TSS V+VL
Subject   8388  RVHKTMLFPNQVLAPPLRL*EPTDNTSSLVIVL  8486

Range 4: 8641 to 8817 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.0 bits(142) 0.0 32/59(54%) 0/59(0%) Plus/Minus
Query       14  LNNVLPIKALRQIHKRLKNLMQKIYIRCF*RSKFHEEFQRVGNEKQTVIHLDHKLRAKI  190
                L N+ PIK LRQIHKRLKNL+Q+I I  F   + ++  QRV NE Q +I+L+ KLR +I
Subject   8641  LYNIFPIKTLRQIHKRLKNLVQQIDIGRFRSPELNK*LQRVWNEIQVIIYLN*KLRTEI  8817

Range 5: 8389 to 8595 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
66.6 bits(139) 0.0 34/69(49%) 0/69(0%) Plus/Minus
Query      236  T*NRCVDV*RLPAKNKTIIAAYDHIIVI*TPKYNGQQSTKNDTIT*PSVCSTTPPLRSNRQHKLLRHGP  442
                T*N  + + R  AKNK I+A  D +IVI*TPKY   +S +N  I  PS+ STT  LR++ QH L  H P
Subject   8389  T*NHGIYIQRSLAKNKAIVATNDDVIVI*TPKYYA*KSAQNYAIPQPSIGSTTTSLRADGQH*LFGHCP  8595

Range 6: 8388 to 8816 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
105.1 bits(223) 0.0 64/143(45%) 0/143(0%) Minus/Plus
Query       15  QDHDEGACAVCWIAKAEWWSKHLVR**YRSLYFAVRCT*GSRLRLCGHKRR**SYF*PAAFRRRHIGFK**FWL*CEDV*SSCSIFLL*VYGPGG*RFVFRSRPVETLREIWSVKNI*YRSFA*DFSVFCGSVEGP*SGGRYS  443
                +D+D+ A  V  +++  WWS++LV  *+  ++   R T*GSRLRL     R * YF* A    R+ G K* F   CE +*SS ++FL *V+    *  VFRSRP E +  +    N+ YRS A DFS+FCG VEG * G  Y+
Subject   8388  KDNDQRASVVRRLSET*WWSQYLVGE*HSFVHSFKRST*GSRLRLRRR*WRR*PYF*QATVGYRYRGSK*QFRFRCEGI*SSGAVFLF*VFSSSR**PVFRSRPSEVIC*VRGF*NVRYRSAARDFSIFCGFVEGF**GRCYT  8816

Range 7: 8405 to 8803 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.7 bits(196) 0.0 56/133(42%) 0/133(0%) Plus/Minus
Query       28  PD*GPSTDPQKTEKSHAKDLYQMFLTLQISRRVSTGRERKTNRHPPGP*T*SKNMEQLD*TSSHQSQNYHLKPMCRRLKAAG*K*DYHRRL*PHNRNLDP*VQRTAKYKERYYYLTKCLLHHSAFAIQQTAQA  426
                P * PST+PQK EKS A D Y+ F   +  +  S G ER T  H     T*++N   LD*  SH+++N HL+P       A *K* Y R     NRNLDP*V R  +  +  Y  TK  LHH     ++T  A
Subject   8405  PY*NPSTNPQKIEKSRAADRYRTF*KPRT*QITSEGLERNTGHHLLELKT*NRNTAPLD*IPSHRNRNCHLEPRYLYPTVAC*K*GYRRH*RRRNRNLDP*VLRLKECTKLCYSPTKYWLHHYVSESRRTTLA  8803

Range 8: 8588 to 8818 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
66.1 bits(138) 0.0 37/77(48%) 0/77(0%) Minus/Plus
Query       13  F*VIILALM*RCLIKLLHIFALSLWSRWMTVCFSFPTR*NSS*NLERQKHLI*IFCMRFFSLLWICRRALIGRTLFK  243
                F*V I   M*R LIK   I  LS   + M  C SF T *+   +    K  I I C RFF+LLWICRR LIG+ L++
Subject   8588  F*VTISVSM*RYLIKRRRISVLSF*FK*MMTCISFQTL*SYLLSSGLLKRPISICCTRFFNLLWICRRVLIGKMLYR  8818

Range 9: 8390 to 8560 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
39.6 bits(80) 0.0 28/57(49%) 0/57(0%) Minus/Plus
Query      271  GP*RRSLCCLLDRKGGVVEQTLG*VIVSFFVLCCPLYLGV*ITIMWS*AAMIVLFLA  441
                G * +S CC    +  VVE  LG  I  F  L    YLGV*ITI  S  A I LFLA
Subject   8390  GQ*PKS*CCPSALRDVVVEPILGWGIA*FCALF*A*YLGV*ITITSSLVATIALFLA  8560

Nucleotide Sequence (258 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
26
52
78
104
130
156
182
208
234
258

Descriptions

Alignments

Grapevine leafroll associated virus 3 partial CP gene for coat protein, genomic RNA, isolate TA 3.3

Sequence ID: AJ606346.1 Length: 484 Number of Matches: 11

Range 1: 35 to 289 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
203.6 bits(438) 0.0 85/85(100%) 0/85(0%) Plus/Plus
Query        3  KSSPKII*ELE*GMRHKENLVRRVS*STLRTGHRRN*RESP*CPKNTYSPQQLWLQRRRSHLGSHQRKWWNHRKPI*G*CRNLRL  257
                KSSPKII*ELE*GMRHKENLVRRVS*STLRTGHRRN*RESP*CPKNTYSPQQLWLQRRRSHLGSHQRKWWNHRKPI*G*CRNLRL
Subject     35  KSSPKII*ELE*GMRHKENLVRRVS*STLRTGHRRN*RESP*CPKNTYSPQQLWLQRRRSHLGSHQRKWWNHRKPI*G*CRNLRL  289

Range 2: 34 to 201 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
141.7 bits(303) 0.0 56/56(100%) 0/56(0%) Minus/Minus
Query        2  CSQSCCGEYVFFGHYGDSR*FRLCPVLNVL*ETRLTKFSLCRIPYSNSQIIFGDDF  169
                CSQSCCGEYVFFGHYGDSR*FRLCPVLNVL*ETRLTKFSLCRIPYSNSQIIFGDDF
Subject     34  CSQSCCGEYVFFGHYGDSR*FRLCPVLNVL*ETRLTKFSLCRIPYSNSQIIFGDDF  201

Range 3: 256 to 288 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.8 bits(63) 0.0 11/11(100%) 0/11(0%) Minus/Minus
Query      224  SLRFRHYPYIG  256
                SLRFRHYPYIG
Subject    256  SLRFRHYPYIG  288

Range 4: 33 to 200 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
125.7 bits(268) 0.0 56/56(100%) 0/56(0%) Plus/Plus
Query        1  *SRPRK*FES*SRGCGTRKI**GEFLKVR*GRDTGGINGNRRSARKIRIRHSSFGY  168
                *SRPRK*FES*SRGCGTRKI**GEFLKVR*GRDTGGINGNRRSARKIRIRHSSFGY
Subject     33  *SRPRK*FES*SRGCGTRKI**GEFLKVR*GRDTGGINGNRRSARKIRIRHSSFGY  200

Range 5: 255 to 290 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
26.3 bits(51) 0.0 11/12(92%) 0/12(0%) Plus/Plus
Query      223  NRYRGSAGI*DS  258
                NRYR SAGI*DS
Subject    255  NRYRDSAGI*DS  290

Range 6: 35 to 184 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
119.3 bits(254) 0.0 50/50(100%) 0/50(0%) Minus/Minus
Query        3  WRIRIFRALRRFPLIPPVSRP*RTLRNSPY*IFLVPHPLL*LSNYFRGRL  152
                WRIRIFRALRRFPLIPPVSRP*RTLRNSPY*IFLVPHPLL*LSNYFRGRL
Subject     35  WRIRIFRALRRFPLIPPVSRP*RTLRNSPY*IFLVPHPLL*LSNYFRGRL  184

Range 7: 254 to 289 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
27.6 bits(54) 0.0 11/12(92%) 0/12(0%) Minus/Minus
Query      222  ESQIPALPLYRF  257
                ESQIPAL LYRF
Subject    254  ESQIPALSLYRF  289

Range 8: 33 to 179 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.7 bits(253) 0.0 49/49(100%) 0/49(0%) Minus/Minus
Query        1  NTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLKLFSGTTS  147
                NTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLKLFSGTTS
Subject     33  NTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLKLFSGTTS  179

Range 9: 261 to 290 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.1 bits(44) 0.0 9/10(90%) 0/10(0%) Minus/Minus
Query      229  RVSDSGTTPI  258
                RVSDSGT PI
Subject    261  RVSDSGTIPI  290

Range 10: 34 to 180 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
113.4 bits(245) 0.0 49/49(100%) 0/49(0%) Plus/Plus
Query        2  EVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVF  148
                EVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVF
Subject     34  EVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVF  180

Range 11: 259 to 288 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.0 bits(49) 0.0 9/10(90%) 0/10(0%) Plus/Plus
Query      227  DIGVVPESET  256
                DIG+VPESET
Subject    259  DIGIVPESET  288

Grapevine leafroll associated virus 3 partial CP gene for coat protein, genomic RNA, isolate SS 5.1

Sequence ID: AJ606348.1 Length: 484 Number of Matches: 11

Range 1: 35 to 289 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
203.6 bits(438) 0.0 85/85(100%) 0/85(0%) Plus/Plus
Query        3  KSSPKII*ELE*GMRHKENLVRRVS*STLRTGHRRN*RESP*CPKNTYSPQQLWLQRRRSHLGSHQRKWWNHRKPI*G*CRNLRL  257
                KSSPKII*ELE*GMRHKENLVRRVS*STLRTGHRRN*RESP*CPKNTYSPQQLWLQRRRSHLGSHQRKWWNHRKPI*G*CRNLRL
Subject     35  KSSPKII*ELE*GMRHKENLVRRVS*STLRTGHRRN*RESP*CPKNTYSPQQLWLQRRRSHLGSHQRKWWNHRKPI*G*CRNLRL  289

Range 2: 34 to 201 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
141.7 bits(303) 0.0 56/56(100%) 0/56(0%) Minus/Minus
Query        2  CSQSCCGEYVFFGHYGDSR*FRLCPVLNVL*ETRLTKFSLCRIPYSNSQIIFGDDF  169
                CSQSCCGEYVFFGHYGDSR*FRLCPVLNVL*ETRLTKFSLCRIPYSNSQIIFGDDF
Subject     34  CSQSCCGEYVFFGHYGDSR*FRLCPVLNVL*ETRLTKFSLCRIPYSNSQIIFGDDF  201

Range 3: 256 to 288 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.8 bits(63) 0.0 11/11(100%) 0/11(0%) Minus/Minus
Query      224  SLRFRHYPYIG  256
                SLRFRHYPYIG
Subject    256  SLRFRHYPYIG  288

Range 4: 33 to 200 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.4 bits(263) 0.0 55/56(98%) 0/56(0%) Plus/Plus
Query        1  *SRPRK*FES*SRGCGTRKI**GEFLKVR*GRDTGGINGNRRSARKIRIRHSSFGY  168
                *S PRK*FES*SRGCGTRKI**GEFLKVR*GRDTGGINGNRRSARKIRIRHSSFGY
Subject     33  *SHPRK*FES*SRGCGTRKI**GEFLKVR*GRDTGGINGNRRSARKIRIRHSSFGY  200

Range 5: 255 to 290 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.5 bits(58) 0.0 12/12(100%) 0/12(0%) Plus/Plus
Query      223  NRYRGSAGI*DS  258
                NRYRGSAGI*DS
Subject    255  NRYRGSAGI*DS  290

Range 6: 33 to 179 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
115.9 bits(247) 0.0 48/49(98%) 0/49(0%) Minus/Minus
Query        1  NTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLKLFSGTTS  147
                NTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLKLFSG TS
Subject     33  NTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLKLFSGMTS  179

Range 7: 254 to 289 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.3 bits(62) 0.0 12/12(100%) 0/12(0%) Minus/Minus
Query      222  ESQIPALPLYRF  257
                ESQIPALPLYRF
Subject    254  ESQIPALPLYRF  289

Range 8: 41 to 184 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
115.2 bits(245) 0.0 48/48(100%) 0/48(0%) Minus/Minus
Query        9  WRIRIFRALRRFPLIPPVSRP*RTLRNSPY*IFLVPHPLL*LSNYFRG  152
                WRIRIFRALRRFPLIPPVSRP*RTLRNSPY*IFLVPHPLL*LSNYFRG
Subject     41  WRIRIFRALRRFPLIPPVSRP*RTLRNSPY*IFLVPHPLL*LSNYFRG  184

Range 9: 261 to 290 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.8 bits(50) 0.0 10/10(100%) 0/10(0%) Minus/Minus
Query      229  RVSDSGTTPI  258
                RVSDSGTTPI
Subject    261  RVSDSGTTPI  290

Range 10: 34 to 180 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
113.0 bits(244) 0.0 48/49(98%) 0/49(0%) Plus/Plus
Query        2  EVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVF  148
                EV+PENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVF
Subject     34  EVIPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVF  180

Range 11: 259 to 288 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.5 bits(50) 0.0 10/10(100%) 0/10(0%) Plus/Plus
Query      227  DIGVVPESET  256
                DIGVVPESET
Subject    259  DIGVVPESET  288

Grapevine leafroll associated virus 3 partial CP gene for coat protein, genomic RNA, isolate MN 18

Sequence ID: AJ606349.1 Length: 484 Number of Matches: 11

Range 1: 35 to 289 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
203.6 bits(438) 0.0 85/85(100%) 0/85(0%) Plus/Plus
Query        3  KSSPKII*ELE*GMRHKENLVRRVS*STLRTGHRRN*RESP*CPKNTYSPQQLWLQRRRSHLGSHQRKWWNHRKPI*G*CRNLRL  257
                KSSPKII*ELE*GMRHKENLVRRVS*STLRTGHRRN*RESP*CPKNTYSPQQLWLQRRRSHLGSHQRKWWNHRKPI*G*CRNLRL
Subject     35  KSSPKII*ELE*GMRHKENLVRRVS*STLRTGHRRN*RESP*CPKNTYSPQQLWLQRRRSHLGSHQRKWWNHRKPI*G*CRNLRL  289

Range 2: 34 to 201 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
141.7 bits(303) 0.0 56/56(100%) 0/56(0%) Minus/Minus
Query        2  CSQSCCGEYVFFGHYGDSR*FRLCPVLNVL*ETRLTKFSLCRIPYSNSQIIFGDDF  169
                CSQSCCGEYVFFGHYGDSR*FRLCPVLNVL*ETRLTKFSLCRIPYSNSQIIFGDDF
Subject     34  CSQSCCGEYVFFGHYGDSR*FRLCPVLNVL*ETRLTKFSLCRIPYSNSQIIFGDDF  201

Range 3: 256 to 288 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.8 bits(63) 0.0 11/11(100%) 0/11(0%) Minus/Minus
Query      224  SLRFRHYPYIG  256
                SLRFRHYPYIG
Subject    256  SLRFRHYPYIG  288

Range 4: 33 to 200 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
125.7 bits(268) 0.0 56/56(100%) 0/56(0%) Plus/Plus
Query        1  *SRPRK*FES*SRGCGTRKI**GEFLKVR*GRDTGGINGNRRSARKIRIRHSSFGY  168
                *SRPRK*FES*SRGCGTRKI**GEFLKVR*GRDTGGINGNRRSARKIRIRHSSFGY
Subject     33  *SRPRK*FES*SRGCGTRKI**GEFLKVR*GRDTGGINGNRRSARKIRIRHSSFGY  200

Range 5: 255 to 290 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.5 bits(58) 0.0 12/12(100%) 0/12(0%) Plus/Plus
Query      223  NRYRGSAGI*DS  258
                NRYRGSAGI*DS
Subject    255  NRYRGSAGI*DS  290

Range 6: 35 to 184 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
119.3 bits(254) 0.0 50/50(100%) 0/50(0%) Minus/Minus
Query        3  WRIRIFRALRRFPLIPPVSRP*RTLRNSPY*IFLVPHPLL*LSNYFRGRL  152
                WRIRIFRALRRFPLIPPVSRP*RTLRNSPY*IFLVPHPLL*LSNYFRGRL
Subject     35  WRIRIFRALRRFPLIPPVSRP*RTLRNSPY*IFLVPHPLL*LSNYFRGRL  184

Range 7: 254 to 289 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.3 bits(62) 0.0 12/12(100%) 0/12(0%) Minus/Minus
Query      222  ESQIPALPLYRF  257
                ESQIPALPLYRF
Subject    254  ESQIPALPLYRF  289

Range 8: 33 to 179 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.7 bits(253) 0.0 49/49(100%) 0/49(0%) Minus/Minus
Query        1  NTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLKLFSGTTS  147
                NTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLKLFSGTTS
Subject     33  NTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLKLFSGTTS  179

Range 9: 261 to 290 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.8 bits(50) 0.0 10/10(100%) 0/10(0%) Minus/Minus
Query      229  RVSDSGTTPI  258
                RVSDSGTTPI
Subject    261  RVSDSGTTPI  290

Range 10: 34 to 180 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
113.4 bits(245) 0.0 49/49(100%) 0/49(0%) Plus/Plus
Query        2  EVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVF  148
                EVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVF
Subject     34  EVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVF  180

Range 11: 259 to 288 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.5 bits(50) 0.0 10/10(100%) 0/10(0%) Plus/Plus
Query      227  DIGVVPESET  256
                DIGVVPESET
Subject    259  DIGVVPESET  288

Grapevine leafroll associated virus 3 partial CP gene for coat protein, genomic RNA, isolate MT 38

Sequence ID: AJ606350.1 Length: 484 Number of Matches: 11

Range 1: 35 to 289 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
203.6 bits(438) 0.0 85/85(100%) 0/85(0%) Plus/Plus
Query        3  KSSPKII*ELE*GMRHKENLVRRVS*STLRTGHRRN*RESP*CPKNTYSPQQLWLQRRRSHLGSHQRKWWNHRKPI*G*CRNLRL  257
                KSSPKII*ELE*GMRHKENLVRRVS*STLRTGHRRN*RESP*CPKNTYSPQQLWLQRRRSHLGSHQRKWWNHRKPI*G*CRNLRL
Subject     35  KSSPKII*ELE*GMRHKENLVRRVS*STLRTGHRRN*RESP*CPKNTYSPQQLWLQRRRSHLGSHQRKWWNHRKPI*G*CRNLRL  289

Range 2: 34 to 201 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
141.7 bits(303) 0.0 56/56(100%) 0/56(0%) Minus/Minus
Query        2  CSQSCCGEYVFFGHYGDSR*FRLCPVLNVL*ETRLTKFSLCRIPYSNSQIIFGDDF  169
                CSQSCCGEYVFFGHYGDSR*FRLCPVLNVL*ETRLTKFSLCRIPYSNSQIIFGDDF
Subject     34  CSQSCCGEYVFFGHYGDSR*FRLCPVLNVL*ETRLTKFSLCRIPYSNSQIIFGDDF  201

Range 3: 256 to 288 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.8 bits(63) 0.0 11/11(100%) 0/11(0%) Minus/Minus
Query      224  SLRFRHYPYIG  256
                SLRFRHYPYIG
Subject    256  SLRFRHYPYIG  288

Range 4: 33 to 200 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
125.7 bits(268) 0.0 56/56(100%) 0/56(0%) Plus/Plus
Query        1  *SRPRK*FES*SRGCGTRKI**GEFLKVR*GRDTGGINGNRRSARKIRIRHSSFGY  168
                *SRPRK*FES*SRGCGTRKI**GEFLKVR*GRDTGGINGNRRSARKIRIRHSSFGY
Subject     33  *SRPRK*FES*SRGCGTRKI**GEFLKVR*GRDTGGINGNRRSARKIRIRHSSFGY  200

Range 5: 255 to 290 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.5 bits(58) 0.0 12/12(100%) 0/12(0%) Plus/Plus
Query      223  NRYRGSAGI*DS  258
                NRYRGSAGI*DS
Subject    255  NRYRGSAGI*DS  290

Range 6: 35 to 184 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
119.3 bits(254) 0.0 50/50(100%) 0/50(0%) Minus/Minus
Query        3  WRIRIFRALRRFPLIPPVSRP*RTLRNSPY*IFLVPHPLL*LSNYFRGRL  152
                WRIRIFRALRRFPLIPPVSRP*RTLRNSPY*IFLVPHPLL*LSNYFRGRL
Subject     35  WRIRIFRALRRFPLIPPVSRP*RTLRNSPY*IFLVPHPLL*LSNYFRGRL  184

Range 7: 254 to 289 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.3 bits(62) 0.0 12/12(100%) 0/12(0%) Minus/Minus
Query      222  ESQIPALPLYRF  257
                ESQIPALPLYRF
Subject    254  ESQIPALPLYRF  289

Range 8: 33 to 179 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.7 bits(253) 0.0 49/49(100%) 0/49(0%) Minus/Minus
Query        1  NTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLKLFSGTTS  147
                NTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLKLFSGTTS
Subject     33  NTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLKLFSGTTS  179

Range 9: 261 to 290 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.8 bits(50) 0.0 10/10(100%) 0/10(0%) Minus/Minus
Query      229  RVSDSGTTPI  258
                RVSDSGTTPI
Subject    261  RVSDSGTTPI  290

Range 10: 34 to 180 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
113.4 bits(245) 0.0 49/49(100%) 0/49(0%) Plus/Plus
Query        2  EVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVF  148
                EVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVF
Subject     34  EVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVF  180

Range 11: 259 to 288 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.5 bits(50) 0.0 10/10(100%) 0/10(0%) Plus/Plus
Query      227  DIGVVPESET  256
                DIGVVPESET
Subject    259  DIGVVPESET  288

Grapevine leafroll associated virus 3 partial CP gene for coat protein, genomic RNA, isolate MT 48

Sequence ID: AJ606351.1 Length: 484 Number of Matches: 11

Range 1: 35 to 289 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
203.6 bits(438) 0.0 85/85(100%) 0/85(0%) Plus/Plus
Query        3  KSSPKII*ELE*GMRHKENLVRRVS*STLRTGHRRN*RESP*CPKNTYSPQQLWLQRRRSHLGSHQRKWWNHRKPI*G*CRNLRL  257
                KSSPKII*ELE*GMRHKENLVRRVS*STLRTGHRRN*RESP*CPKNTYSPQQLWLQRRRSHLGSHQRKWWNHRKPI*G*CRNLRL
Subject     35  KSSPKII*ELE*GMRHKENLVRRVS*STLRTGHRRN*RESP*CPKNTYSPQQLWLQRRRSHLGSHQRKWWNHRKPI*G*CRNLRL  289

Range 2: 34 to 201 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
141.7 bits(303) 0.0 56/56(100%) 0/56(0%) Minus/Minus
Query        2  CSQSCCGEYVFFGHYGDSR*FRLCPVLNVL*ETRLTKFSLCRIPYSNSQIIFGDDF  169
                CSQSCCGEYVFFGHYGDSR*FRLCPVLNVL*ETRLTKFSLCRIPYSNSQIIFGDDF
Subject     34  CSQSCCGEYVFFGHYGDSR*FRLCPVLNVL*ETRLTKFSLCRIPYSNSQIIFGDDF  201

Range 3: 256 to 288 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.8 bits(63) 0.0 11/11(100%) 0/11(0%) Minus/Minus
Query      224  SLRFRHYPYIG  256
                SLRFRHYPYIG
Subject    256  SLRFRHYPYIG  288

Range 4: 33 to 200 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.4 bits(263) 0.0 55/56(98%) 0/56(0%) Plus/Plus
Query        1  *SRPRK*FES*SRGCGTRKI**GEFLKVR*GRDTGGINGNRRSARKIRIRHSSFGY  168
                *S PRK*FES*SRGCGTRKI**GEFLKVR*GRDTGGINGNRRSARKIRIRHSSFGY
Subject     33  *SHPRK*FES*SRGCGTRKI**GEFLKVR*GRDTGGINGNRRSARKIRIRHSSFGY  200

Range 5: 255 to 290 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.5 bits(58) 0.0 12/12(100%) 0/12(0%) Plus/Plus
Query      223  NRYRGSAGI*DS  258
                NRYRGSAGI*DS
Subject    255  NRYRGSAGI*DS  290

Range 6: 33 to 179 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
115.9 bits(247) 0.0 48/49(98%) 0/49(0%) Minus/Minus
Query        1  NTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLKLFSGTTS  147
                NTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLKLFSG TS
Subject     33  NTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLKLFSGMTS  179

Range 7: 254 to 289 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.3 bits(62) 0.0 12/12(100%) 0/12(0%) Minus/Minus
Query      222  ESQIPALPLYRF  257
                ESQIPALPLYRF
Subject    254  ESQIPALPLYRF  289

Range 8: 41 to 184 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
115.2 bits(245) 0.0 48/48(100%) 0/48(0%) Minus/Minus
Query        9  WRIRIFRALRRFPLIPPVSRP*RTLRNSPY*IFLVPHPLL*LSNYFRG  152
                WRIRIFRALRRFPLIPPVSRP*RTLRNSPY*IFLVPHPLL*LSNYFRG
Subject     41  WRIRIFRALRRFPLIPPVSRP*RTLRNSPY*IFLVPHPLL*LSNYFRG  184

Range 9: 261 to 290 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.8 bits(50) 0.0 10/10(100%) 0/10(0%) Minus/Minus
Query      229  RVSDSGTTPI  258
                RVSDSGTTPI
Subject    261  RVSDSGTTPI  290

Range 10: 34 to 180 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
113.0 bits(244) 0.0 48/49(98%) 0/49(0%) Plus/Plus
Query        2  EVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVF  148
                EV+PENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVF
Subject     34  EVIPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVF  180

Range 11: 259 to 288 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.5 bits(50) 0.0 10/10(100%) 0/10(0%) Plus/Plus
Query      227  DIGVVPESET  256
                DIGVVPESET
Subject    259  DIGVVPESET  288

Nucleotide Sequence (305 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
31
62
93
124
155
186
217
248
279
305

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
214.1 1055.7 25% 4.277e-54 84% JX559645.1
214.1 1037.4 25% 4.277e-54 82% NC_004667.1
214.1 1046.5 25% 4.277e-54 84% KJ174518.1
214.1 1037.4 25% 4.277e-54 82% AF037268.2
214.1 1055.7 25% 4.277e-54 84% GQ352631.1

Alignments

Grapevine leafroll associated virus 3 isolate 3138 07, complete genome

Sequence ID: JX559645.1 Length: 18498 Number of Matches: 6

Range 1: 6777 to 7073 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
214.1 bits(461) 0.0 89/99(90%) 0/99(0%) Minus/Plus
Query        1  MHQALLQLGVFATGASEGLFFADINHIPFINSEKAFRMDCPVFVPKKESVIYTSKSYR*PLDDCYFLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP  297
                MHQ LLQLGVFATGASEGLFF DIN IPFIN EK FRMDC VFVPKKESV+YTSKSYR PLD CY LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP
Subject   6777  MHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP  7073

Range 2: 6777 to 7073 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
199.9 bits(430) 0.0 84/99(85%) 0/99(0%) Plus/Minus
Query        1  WPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQEVAII*RSPV*FRSVYNAFLLWNKNRTIHPKRLLAVYEWYVIYVCEKEAFRRAGCEDA*L**GLMH  297
                WPFGQ S+Y  ILT NDLFRVTLFRSPYGH*GQ+VA I*R+PV*FRSVYNAFLLWNKN TIHPK LL VYEWY+IYV +KEAFRRAGCEDA*L** LMH
Subject   6777  WPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMH  7073

Range 3: 6778 to 7071 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
190.8 bits(410) 0.0 85/98(87%) 0/98(0%) Minus/Plus
Query        3  CIKPYYN*ASSQPARRKASFSQT*ITYHS*TARRRLGWIVLFLFQRRKALYTLLNHTGDR*MIATSCPQ*P*GERKSVTLKRSLVVRISR**DHCPKG  296
                CIK YYN*ASSQPARRKASF +T*I YHS*T RR LGWIVLFLFQRRKALYTLLNHTG R*M AT CPQ*P*GERKSVTLKRSL VRI++**D CPKG
Subject   6778  CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKG  7071

Range 4: 6776 to 7021 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
172.9 bits(371) 0.0 74/82(90%) 0/82(0%) Plus/Minus
Query       53  FSG*HFSVPLTVIEDKK*QSSNGHLYDLEVYITLSFFGTKTGQSILNAFSLFMNGM*FMSAKKRPSDAPVAKTPSCSKA*CI  298
                FSG*HFSVPLTVIED K*Q+SNGHLYDLEVY TLSFFGTKT QSILN FSLFMNG+*FMS KKRPSDAPVAKTPSCSK *CI
Subject   6776  FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CI  7021

Range 5: 6844 to 7071 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
150.0 bits(321) 0.0 64/76(84%) 0/76(0%) Plus/Minus
Query        3  AFWTVISLPAYPYH*RPFQGNTFPFPLRSLRTRSSNHLTVTCMI*KCI*RFPSLEQKQDNPS*TPSRCL*MVCDLC  230
                AFWT I L  YPY *RPFQGNTFPFPLRSLRT SS HLT TCMI*KCI RFPSLEQKQ NPS*TPS CL*MV DLC
Subject   6844  AFWTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLC  7071

Range 6: 6845 to 7072 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.0 bits(273) 0.0 64/76(84%) 0/76(0%) Minus/Plus
Query        2  HKSHTIHKQREGV*DGLSCFCSKEGKRYIHF*IIQVTVRXXXXXXLNDRKGNGKVLP*KGR*W*G*AGSEITVQKA  229
                HKS TIHKQ EGV*DGL CFCSKEGKR IHF*IIQV+VR LLL+VLNDRKGNGKVLP*KGR* *G*  S+I VQKA
Subject   6845  HKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKA  7072

Grapevine leafroll associated virus 3, complete genome

Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 6

Range 1: 6198 to 6494 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
214.1 bits(461) 0.0 89/99(90%) 0/99(0%) Minus/Plus
Query        1  MHQALLQLGVFATGASEGLFFADINHIPFINSEKAFRMDCPVFVPKKESVIYTSKSYR*PLDDCYFLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP  297
                MHQ LLQLGVFATGASEGLFF DIN IPFIN EK FRMDC VFVPKKESV+YTSKSYR PLD CY LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP
Subject   6198  MHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP  6494

Range 2: 6198 to 6494 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
197.2 bits(424) 0.0 82/99(83%) 0/99(0%) Plus/Minus
Query        1  WPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQEVAII*RSPV*FRSVYNAFLLWNKNRTIHPKRLLAVYEWYVIYVCEKEAFRRAGCEDA*L**GLMH  297
                WPFGQ S+Y  +LT NDLFRVTLFRSPYGH*GQ+VA I*R+PV FRSVYNAFLLWNKN TIHPK LL VYEWY+IYV +KEAFRRAGCEDA*L** LMH
Subject   6198  WPFGQRSYYWFVLTANDLFRVTLFRSPYGH*GQQVANI*RTPVRFRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMH  6494

Range 3: 6199 to 6492 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
184.8 bits(397) 0.0 83/98(85%) 0/98(0%) Minus/Plus
Query        3  CIKPYYN*ASSQPARRKASFSQT*ITYHS*TARRRLGWIVLFLFQRRKALYTLLNHTGDR*MIATSCPQ*P*GERKSVTLKRSLVVRISR**DHCPKG  296
                CIK YYN*ASSQPARRKASF +T*I YHS*T RR LGWIVLFLFQRRKALYTLLN TG R*M AT CPQ*P*GERKSVTLKRSL VR ++**D CPKG
Subject   6199  CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNRTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRTNQ**DRCPKG  6492

Range 4: 6197 to 6442 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
172.9 bits(371) 0.0 74/82(90%) 0/82(0%) Plus/Minus
Query       53  FSG*HFSVPLTVIEDKK*QSSNGHLYDLEVYITLSFFGTKTGQSILNAFSLFMNGM*FMSAKKRPSDAPVAKTPSCSKA*CI  298
                FSG*HFSVPLTVIED K*Q+SNGHLYDLEVY TLSFFGTKT QSILN FSLFMNG+*FMS KKRPSDAPVAKTPSCSK *CI
Subject   6197  FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CI  6442

Range 5: 6265 to 6492 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
143.1 bits(306) 0.0 62/76(82%) 0/76(0%) Plus/Minus
Query        3  AFWTVISLPAYPYH*RPFQGNTFPFPLRSLRTRSSNHLTVTCMI*KCI*RFPSLEQKQDNPS*TPSRCL*MVCDLC  230
                AFWT I L   PY *RPFQGNTFPFPLRSLRT SS HLT TC I*KCI RFPSLEQKQ NPS*TPS CL*MV DLC
Subject   6265  AFWTAILLLVCPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCTI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLC  6492

Range 6: 6266 to 6493 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
125.2 bits(267) 0.0 62/76(82%) 0/76(0%) Minus/Plus
Query        2  HKSHTIHKQREGV*DGLSCFCSKEGKRYIHF*IIQVTVRXXXXXXLNDRKGNGKVLP*KGR*W*G*AGSEITVQKA  229
                HKS TIHKQ EGV*DGL CFCSKEGKR IHF*I+QV+VR LLL+VLNDRKGNGKVLP*KGR* *G   S+I VQKA
Subject   6266  HKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IVQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*GQTSSKIAVQKA  6493

Grapevine leafroll associated virus 3, complete genome

Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 6

Range 1: 6777 to 7073 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
214.1 bits(461) 0.0 89/99(90%) 0/99(0%) Minus/Plus
Query        1  MHQALLQLGVFATGASEGLFFADINHIPFINSEKAFRMDCPVFVPKKESVIYTSKSYR*PLDDCYFLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP  297
                MHQ LLQLGVFATGASEGLFF DIN IPFIN EK FRMDC VFVPKKESV+YTSKSYR PLD CY LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP
Subject   6777  MHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP  7073

Range 2: 6777 to 7073 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.9 bits(419) 0.0 83/99(84%) 0/99(0%) Plus/Minus
Query        1  WPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQEVAII*RSPV*FRSVYNAFLLWNKNRTIHPKRLLAVYEWYVIYVCEKEAFRRAGCEDA*L**GLMH  297
                WPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQ+VA +*R+ V*FRSVYN FLLWNK  TIHPK LL VYEWY+IYV +KEAFRRA  EDA*L** LMH
Subject   6777  WPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQQVANV*RTSV*FRSVYNTFLLWNKYSTIHPKHLLPVYEWYLIYVSKKEAFRRASREDA*L**ALMH  7073

Range 3: 6778 to 7071 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
180.7 bits(388) 0.0 82/98(84%) 0/98(0%) Minus/Plus
Query        3  CIKPYYN*ASSQPARRKASFSQT*ITYHS*TARRRLGWIVLFLFQRRKALYTLLNHTGDR*MIATSCPQ*P*GERKSVTLKRSLVVRISR**DHCPKG  296
                CIK YYN*ASS+ AR KASF +T*I YHS*T RR LGWIVL+LFQRRK LYTLLNHT  R*  AT CPQ*P*GERKSVTLKRSLVVRISR**DHCPKG
Subject   6778  CIKAYYN*ASSRLARLKASFLET*IRYHS*TGRRCLGWIVLYLFQRRKVLYTLLNHTDVR*TFATCCPQ*P*GERKSVTLKRSLVVRISR**DHCPKG  7071

Range 4: 6776 to 7021 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
169.2 bits(363) 0.0 72/82(88%) 0/82(0%) Plus/Minus
Query       53  FSG*HFSVPLTVIEDKK*QSSNGHLYDLEVYITLSFFGTKTGQSILNAFSLFMNGM*FMSAKKRPSDAPVAKTPSCSKA*CI  298
                FSG*HFSVPLTVIED K*Q+SNGHLYDLEVY TLSFFGT T QSILN FSLFMNG+*FMS KKRPSDAPVAKTP+CSK *CI
Subject   6776  FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTNTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPNCSKP*CI  7021

Range 5: 6844 to 7071 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
152.3 bits(326) 0.0 65/76(86%) 0/76(0%) Plus/Minus
Query        3  AFWTVISLPAYPYH*RPFQGNTFPFPLRSLRTRSSNHLTVTCMI*KCI*RFPSLEQKQDNPS*TPSRCL*MVCDLC  230
                AFWTVISLPAYPYH*RPFQGNTFPFPLRSLRT SS  LT  CMI*KCI  FPSLEQ Q NPS*TPS CL*MV DLC
Subject   6844  AFWTVISLPAYPYH*RPFQGNTFPFPLRSLRTTSSKRLTDICMI*KCIQHFPSLEQIQHNPS*TPSPCL*MVSDLC  7071

Range 6: 6845 to 7072 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
135.3 bits(289) 0.0 66/76(87%) 0/76(0%) Minus/Plus
Query        2  HKSHTIHKQREGV*DGLSCFCSKEGKRYIHF*IIQVTVRXXXXXXLNDRKGNGKVLP*KGR*W*G*AGSEITVQKA  229
                HKS TIHKQ EGV*DGL C CSKEGK  IHF*IIQ++VR LLL+VLNDRKGNGKVLP*KGR*W*G*AGSEITVQKA
Subject   6845  HKSDTIHKQGEGV*DGLCCICSKEGKCCIHF*IIQMSVRRLLLVVLNDRKGNGKVLP*KGR*W*G*AGSEITVQKA  7072

Grapevine leafroll associated virus 3, complete genome

Sequence ID: AF037268.2 Length: 17919 Number of Matches: 6

Range 1: 6198 to 6494 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
214.1 bits(461) 0.0 89/99(90%) 0/99(0%) Minus/Plus
Query        1  MHQALLQLGVFATGASEGLFFADINHIPFINSEKAFRMDCPVFVPKKESVIYTSKSYR*PLDDCYFLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP  297
                MHQ LLQLGVFATGASEGLFF DIN IPFIN EK FRMDC VFVPKKESV+YTSKSYR PLD CY LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP
Subject   6198  MHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP  6494

Range 2: 6198 to 6494 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
197.2 bits(424) 0.0 82/99(83%) 0/99(0%) Plus/Minus
Query        1  WPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQEVAII*RSPV*FRSVYNAFLLWNKNRTIHPKRLLAVYEWYVIYVCEKEAFRRAGCEDA*L**GLMH  297
                WPFGQ S+Y  +LT NDLFRVTLFRSPYGH*GQ+VA I*R+PV FRSVYNAFLLWNKN TIHPK LL VYEWY+IYV +KEAFRRAGCEDA*L** LMH
Subject   6198  WPFGQRSYYWFVLTANDLFRVTLFRSPYGH*GQQVANI*RTPVRFRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMH  6494

Range 3: 6199 to 6492 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
184.8 bits(397) 0.0 83/98(85%) 0/98(0%) Minus/Plus
Query        3  CIKPYYN*ASSQPARRKASFSQT*ITYHS*TARRRLGWIVLFLFQRRKALYTLLNHTGDR*MIATSCPQ*P*GERKSVTLKRSLVVRISR**DHCPKG  296
                CIK YYN*ASSQPARRKASF +T*I YHS*T RR LGWIVLFLFQRRKALYTLLN TG R*M AT CPQ*P*GERKSVTLKRSL VR ++**D CPKG
Subject   6199  CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNRTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRTNQ**DRCPKG  6492

Range 4: 6197 to 6442 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
172.9 bits(371) 0.0 74/82(90%) 0/82(0%) Plus/Minus
Query       53  FSG*HFSVPLTVIEDKK*QSSNGHLYDLEVYITLSFFGTKTGQSILNAFSLFMNGM*FMSAKKRPSDAPVAKTPSCSKA*CI  298
                FSG*HFSVPLTVIED K*Q+SNGHLYDLEVY TLSFFGTKT QSILN FSLFMNG+*FMS KKRPSDAPVAKTPSCSK *CI
Subject   6197  FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CI  6442

Range 5: 6265 to 6492 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
143.1 bits(306) 0.0 62/76(82%) 0/76(0%) Plus/Minus
Query        3  AFWTVISLPAYPYH*RPFQGNTFPFPLRSLRTRSSNHLTVTCMI*KCI*RFPSLEQKQDNPS*TPSRCL*MVCDLC  230
                AFWT I L   PY *RPFQGNTFPFPLRSLRT SS HLT TC I*KCI RFPSLEQKQ NPS*TPS CL*MV DLC
Subject   6265  AFWTAILLLVCPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCTI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLC  6492

Range 6: 6266 to 6493 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
125.2 bits(267) 0.0 62/76(82%) 0/76(0%) Minus/Plus
Query        2  HKSHTIHKQREGV*DGLSCFCSKEGKRYIHF*IIQVTVRXXXXXXLNDRKGNGKVLP*KGR*W*G*AGSEITVQKA  229
                HKS TIHKQ EGV*DGL CFCSKEGKR IHF*I+QV+VR LLL+VLNDRKGNGKVLP*KGR* *G   S+I VQKA
Subject   6266  HKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IVQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*GQTSSKIAVQKA  6493

Grapevine leafroll associated virus 3 isolate 621, complete genome

Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 6

Range 1: 6777 to 7073 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
214.1 bits(461) 0.0 89/99(90%) 0/99(0%) Minus/Plus
Query        1  MHQALLQLGVFATGASEGLFFADINHIPFINSEKAFRMDCPVFVPKKESVIYTSKSYR*PLDDCYFLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP  297
                MHQ LLQLGVFATGASEGLFF DIN IPFIN EK FRMDC VFVPKKESV+YTSKSYR PLD CY LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP
Subject   6777  MHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP  7073

Range 2: 6777 to 7073 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
199.9 bits(430) 0.0 84/99(85%) 0/99(0%) Plus/Minus
Query        1  WPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQEVAII*RSPV*FRSVYNAFLLWNKNRTIHPKRLLAVYEWYVIYVCEKEAFRRAGCEDA*L**GLMH  297
                WPFGQ S+Y  ILT NDLFRVTLFRSPYGH*GQ+VA I*R+PV*FRSVYNAFLLWNKN TIHPK LL VYEWY+IYV +KEAFRRAGCEDA*L** LMH
Subject   6777  WPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMH  7073

Range 3: 6778 to 7071 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
190.8 bits(410) 0.0 85/98(87%) 0/98(0%) Minus/Plus
Query        3  CIKPYYN*ASSQPARRKASFSQT*ITYHS*TARRRLGWIVLFLFQRRKALYTLLNHTGDR*MIATSCPQ*P*GERKSVTLKRSLVVRISR**DHCPKG  296
                CIK YYN*ASSQPARRKASF +T*I YHS*T RR LGWIVLFLFQRRKALYTLLNHTG R*M AT CPQ*P*GERKSVTLKRSL VRI++**D CPKG
Subject   6778  CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKG  7071

Range 4: 6776 to 7021 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
172.9 bits(371) 0.0 74/82(90%) 0/82(0%) Plus/Minus
Query       53  FSG*HFSVPLTVIEDKK*QSSNGHLYDLEVYITLSFFGTKTGQSILNAFSLFMNGM*FMSAKKRPSDAPVAKTPSCSKA*CI  298
                FSG*HFSVPLTVIED K*Q+SNGHLYDLEVY TLSFFGTKT QSILN FSLFMNG+*FMS KKRPSDAPVAKTPSCSK *CI
Subject   6776  FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CI  7021

Range 5: 6844 to 7071 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
150.0 bits(321) 0.0 64/76(84%) 0/76(0%) Plus/Minus
Query        3  AFWTVISLPAYPYH*RPFQGNTFPFPLRSLRTRSSNHLTVTCMI*KCI*RFPSLEQKQDNPS*TPSRCL*MVCDLC  230
                AFWT I L  YPY *RPFQGNTFPFPLRSLRT SS HLT TCMI*KCI RFPSLEQKQ NPS*TPS CL*MV DLC
Subject   6844  AFWTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLC  7071

Range 6: 6845 to 7072 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.0 bits(273) 0.0 64/76(84%) 0/76(0%) Minus/Plus
Query        2  HKSHTIHKQREGV*DGLSCFCSKEGKRYIHF*IIQVTVRXXXXXXLNDRKGNGKVLP*KGR*W*G*AGSEITVQKA  229
                HKS TIHKQ EGV*DGL CFCSKEGKR IHF*IIQV+VR LLL+VLNDRKGNGKVLP*KGR* *G*  S+I VQKA
Subject   6845  HKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKA  7072

Nucleotide Sequence (199 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
20
40
60
80
100
120
140
160
180
199

Descriptions

Alignments

Grapevine leafroll associated virus 3 isolate 3138 07, complete genome

Sequence ID: JX559645.1 Length: 18498 Number of Matches: 6

Range 1: 8489 to 8686 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
153.7 bits(329) 0.0 66/66(100%) 0/66(0%) Plus/Minus
Query        2  KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT  199
                KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT
Subject   8489  KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT  8686

Range 2: 8491 to 8685 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
151.8 bits(325) 0.0 64/65(98%) 0/65(0%) Minus/Plus
Query        3  SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSALSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF  197
                SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTS LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF
Subject   8491  SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF  8685

Range 3: 8490 to 8630 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
99.6 bits(211) 0.0 47/47(100%) 0/47(0%) Minus/Plus
Query       58  VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P  198
                VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P
Subject   8490  VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P  8630

Range 4: 8621 to 8686 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 22/22(100%) 0/22(0%) Minus/Plus
Query        2  YLTKLLLIFVLSF*FKSRIVSF  67
                YLTKLLLIFVLSF*FKSRIVSF
Subject   8621  YLTKLLLIFVLSF*FKSRIVSF  8686

Range 5: 8491 to 8685 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
111.5 bits(237) 0.0 64/65(98%) 0/65(0%) Plus/Minus
Query        3  KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQSRRINI*RLPTKYEAXXXXXXXXXXXXSPKYYG  197
                KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQ+RRINI*RLPTKYEAIITTNYNITII*SPKYYG
Subject   8491  KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQNRRINI*RLPTKYEAIITTNYNITII*SPKYYG  8685

Range 6: 8547 to 8687 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.0 bits(225) 0.0 46/47(98%) 0/47(0%) Plus/Minus
Query        1  KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRADVSISNGCRLNMR  141
                KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLR DVSISNGCRLNMR
Subject   8547  KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR  8687

Grapevine leafroll associated virus 3 isolate 621, complete genome

Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 6

Range 1: 8489 to 8686 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
153.7 bits(329) 0.0 66/66(100%) 0/66(0%) Plus/Minus
Query        2  KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT  199
                KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT
Subject   8489  KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT  8686

Range 2: 8491 to 8685 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
151.8 bits(325) 0.0 64/65(98%) 0/65(0%) Minus/Plus
Query        3  SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSALSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF  197
                SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTS LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF
Subject   8491  SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF  8685

Range 3: 8490 to 8630 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
99.6 bits(211) 0.0 47/47(100%) 0/47(0%) Minus/Plus
Query       58  VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P  198
                VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P
Subject   8490  VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P  8630

Range 4: 8621 to 8686 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 22/22(100%) 0/22(0%) Minus/Plus
Query        2  YLTKLLLIFVLSF*FKSRIVSF  67
                YLTKLLLIFVLSF*FKSRIVSF
Subject   8621  YLTKLLLIFVLSF*FKSRIVSF  8686

Range 5: 8491 to 8685 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
111.5 bits(237) 0.0 64/65(98%) 0/65(0%) Plus/Minus
Query        3  KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQSRRINI*RLPTKYEAXXXXXXXXXXXXSPKYYG  197
                KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQ+RRINI*RLPTKYEAIITTNYNITII*SPKYYG
Subject   8491  KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQNRRINI*RLPTKYEAIITTNYNITII*SPKYYG  8685

Range 6: 8547 to 8687 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.0 bits(225) 0.0 46/47(98%) 0/47(0%) Plus/Minus
Query        1  KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRADVSISNGCRLNMR  141
                KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLR DVSISNGCRLNMR
Subject   8547  KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR  8687

Grapevine leafroll associated virus 3 isolate WA MR, complete genome

Sequence ID: GU983863.1 Length: 18498 Number of Matches: 6

Range 1: 8489 to 8686 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
153.7 bits(329) 0.0 66/66(100%) 0/66(0%) Plus/Minus
Query        2  KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT  199
                KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT
Subject   8489  KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT  8686

Range 2: 8491 to 8685 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
151.8 bits(325) 0.0 64/65(98%) 0/65(0%) Minus/Plus
Query        3  SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSALSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF  197
                SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTS LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF
Subject   8491  SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF  8685

Range 3: 8490 to 8630 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
99.6 bits(211) 0.0 47/47(100%) 0/47(0%) Minus/Plus
Query       58  VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P  198
                VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P
Subject   8490  VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P  8630

Range 4: 8621 to 8686 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 22/22(100%) 0/22(0%) Minus/Plus
Query        2  YLTKLLLIFVLSF*FKSRIVSF  67
                YLTKLLLIFVLSF*FKSRIVSF
Subject   8621  YLTKLLLIFVLSF*FKSRIVSF  8686

Range 5: 8491 to 8685 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
111.5 bits(237) 0.0 64/65(98%) 0/65(0%) Plus/Minus
Query        3  KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQSRRINI*RLPTKYEAXXXXXXXXXXXXSPKYYG  197
                KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQ+RRINI*RLPTKYEAIITTNYNITII*SPKYYG
Subject   8491  KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQNRRINI*RLPTKYEAIITTNYNITII*SPKYYG  8685

Range 6: 8547 to 8687 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.0 bits(225) 0.0 46/47(98%) 0/47(0%) Plus/Minus
Query        1  KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRADVSISNGCRLNMR  141
                KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLR DVSISNGCRLNMR
Subject   8547  KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR  8687

Grapevine leafroll associated virus 3 RNA dependent RNA polymerase (RdRp) gene, partial cds

Sequence ID: AY495340.1 Length: 1655 Number of Matches: 6

Range 1: 1064 to 1261 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
153.7 bits(329) 0.0 66/66(100%) 0/66(0%) Plus/Minus
Query        2  KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT  199
                KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT
Subject   1064  KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT  1261

Range 2: 1066 to 1260 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
151.8 bits(325) 0.0 64/65(98%) 0/65(0%) Minus/Plus
Query        3  SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSALSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF  197
                SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTS LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF
Subject   1066  SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF  1260

Range 3: 1065 to 1205 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
99.6 bits(211) 0.0 47/47(100%) 0/47(0%) Minus/Plus
Query       58  VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P  198
                VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P
Subject   1065  VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P  1205

Range 4: 1196 to 1261 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 22/22(100%) 0/22(0%) Minus/Plus
Query        2  YLTKLLLIFVLSF*FKSRIVSF  67
                YLTKLLLIFVLSF*FKSRIVSF
Subject   1196  YLTKLLLIFVLSF*FKSRIVSF  1261

Range 5: 1066 to 1260 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
111.5 bits(237) 0.0 64/65(98%) 0/65(0%) Plus/Minus
Query        3  KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQSRRINI*RLPTKYEAXXXXXXXXXXXXSPKYYG  197
                KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQ+RRINI*RLPTKYEAIITTNYNITII*SPKYYG
Subject   1066  KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQNRRINI*RLPTKYEAIITTNYNITII*SPKYYG  1260

Range 6: 1122 to 1262 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.0 bits(225) 0.0 46/47(98%) 0/47(0%) Plus/Minus
Query        1  KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRADVSISNGCRLNMR  141
                KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLR DVSISNGCRLNMR
Subject   1122  KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR  1262

Grapevine leafroll associated virus 3 isolate Cl 766, complete genome

Sequence ID: EU344893.1 Length: 17919 Number of Matches: 6

Range 1: 7910 to 8107 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
153.7 bits(329) 0.0 66/66(100%) 0/66(0%) Plus/Minus
Query        2  KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT  199
                KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT
Subject   7910  KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT  8107

Range 2: 7912 to 8106 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
151.8 bits(325) 0.0 64/65(98%) 0/65(0%) Minus/Plus
Query        3  SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSALSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF  197
                SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTS LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF
Subject   7912  SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF  8106

Range 3: 7911 to 8051 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
99.6 bits(211) 0.0 47/47(100%) 0/47(0%) Minus/Plus
Query       58  VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P  198
                VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P
Subject   7911  VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P  8051

Range 4: 8042 to 8107 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 22/22(100%) 0/22(0%) Minus/Plus
Query        2  YLTKLLLIFVLSF*FKSRIVSF  67
                YLTKLLLIFVLSF*FKSRIVSF
Subject   8042  YLTKLLLIFVLSF*FKSRIVSF  8107

Range 5: 7912 to 8106 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
111.5 bits(237) 0.0 64/65(98%) 0/65(0%) Plus/Minus
Query        3  KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQSRRINI*RLPTKYEAXXXXXXXXXXXXSPKYYG  197
                KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQ+RRINI*RLPTKYEAIITTNYNITII*SPKYYG
Subject   7912  KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQNRRINI*RLPTKYEAIITTNYNITII*SPKYYG  8106

Range 6: 7968 to 8108 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.0 bits(225) 0.0 46/47(98%) 0/47(0%) Plus/Minus
Query        1  KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRADVSISNGCRLNMR  141
                KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLR DVSISNGCRLNMR
Subject   7968  KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR  8108

Nucleotide Sequence (119 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
12
24
36
48
60
72
84
96
108
119

Descriptions

Alignments

Grapevine leafroll associated virus 3 isolate 6 6 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130295.1 Length: 4711 Number of Matches: 6

Range 1: 3535 to 3630 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
85.4 bits(180) 0.0 31/32(97%) 0/32(0%) Minus/Minus
Query       22  KCCSTFPPPCLPTQTSFKESTRPNPRFSPDKI  117
                KCCSTFPPPCLPTQTSFKEST PNPRFSPDKI
Subject   3535  KCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI  3630

Range 2: 3534 to 3632 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
77.6 bits(163) 0.0 33/33(100%) 0/33(0%) Plus/Plus
Query       21  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY  119
                IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY
Subject   3534  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY  3632

Range 3: 3534 to 3632 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.3 bits(158) 0.0 32/33(97%) 0/33(0%) Minus/Minus
Query       21  VSAVVRFHLLVYLRKLASRNLRAPILDSPQTKY  119
                VSAVVRFHLLVYLRKLASRNLR PILDSPQTKY
Subject   3534  VSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY  3632

Range 4: 3536 to 3631 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
74.4 bits(156) 0.0 31/32(97%) 0/32(0%) Plus/Plus
Query       23  ILSGENRGLGRVDSLKLVCVGRQGGGNVLQHL  118
                ILSGENRGLG VDSLKLVCVGRQGGGNVLQHL
Subject   3536  ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHL  3631

Range 5: 3533 to 3631 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.6 bits(150) 0.0 33/33(100%) 0/33(0%) Minus/Minus
Query       20  *VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI  118
                *VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI
Subject   3533  *VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI  3631

Range 6: 3535 to 3591 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.4 bits(95) 0.0 18/19(95%) 0/19(0%) Plus/Plus
Query       22  YFVWGESRIGARRFLEASL  78
                YFVWGESRIG RRFLEASL
Subject   3535  YFVWGESRIGVRRFLEASL  3591

Grapevine leafroll associated virus 3 isolate 6 11 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130297.1 Length: 4711 Number of Matches: 6

Range 1: 3535 to 3630 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
85.4 bits(180) 0.0 31/32(97%) 0/32(0%) Minus/Minus
Query       22  KCCSTFPPPCLPTQTSFKESTRPNPRFSPDKI  117
                KCCSTFPPPCLPTQTSFKEST PNPRFSPDKI
Subject   3535  KCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI  3630

Range 2: 3534 to 3632 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
77.6 bits(163) 0.0 33/33(100%) 0/33(0%) Plus/Plus
Query       21  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY  119
                IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY
Subject   3534  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY  3632

Range 3: 3534 to 3632 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.3 bits(158) 0.0 32/33(97%) 0/33(0%) Minus/Minus
Query       21  VSAVVRFHLLVYLRKLASRNLRAPILDSPQTKY  119
                VSAVVRFHLLVYLRKLASRNLR PILDSPQTKY
Subject   3534  VSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY  3632

Range 4: 3536 to 3631 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
74.4 bits(156) 0.0 31/32(97%) 0/32(0%) Plus/Plus
Query       23  ILSGENRGLGRVDSLKLVCVGRQGGGNVLQHL  118
                ILSGENRGLG VDSLKLVCVGRQGGGNVLQHL
Subject   3536  ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHL  3631

Range 5: 3533 to 3631 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.6 bits(150) 0.0 33/33(100%) 0/33(0%) Minus/Minus
Query       20  *VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI  118
                *VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI
Subject   3533  *VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI  3631

Range 6: 3535 to 3591 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.4 bits(95) 0.0 18/19(95%) 0/19(0%) Plus/Plus
Query       22  YFVWGESRIGARRFLEASL  78
                YFVWGESRIG RRFLEASL
Subject   3535  YFVWGESRIGVRRFLEASL  3591

Grapevine leafroll associated virus 3 isolate 6 15 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130299.1 Length: 4711 Number of Matches: 6

Range 1: 3535 to 3630 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
85.4 bits(180) 0.0 31/32(97%) 0/32(0%) Minus/Minus
Query       22  KCCSTFPPPCLPTQTSFKESTRPNPRFSPDKI  117
                KCCSTFPPPCLPTQTSFKEST PNPRFSPDKI
Subject   3535  KCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI  3630

Range 2: 3534 to 3632 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
77.6 bits(163) 0.0 33/33(100%) 0/33(0%) Plus/Plus
Query       21  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY  119
                IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY
Subject   3534  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY  3632

Range 3: 3534 to 3632 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.3 bits(158) 0.0 32/33(97%) 0/33(0%) Minus/Minus
Query       21  VSAVVRFHLLVYLRKLASRNLRAPILDSPQTKY  119
                VSAVVRFHLLVYLRKLASRNLR PILDSPQTKY
Subject   3534  VSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY  3632

Range 4: 3536 to 3631 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
74.4 bits(156) 0.0 31/32(97%) 0/32(0%) Plus/Plus
Query       23  ILSGENRGLGRVDSLKLVCVGRQGGGNVLQHL  118
                ILSGENRGLG VDSLKLVCVGRQGGGNVLQHL
Subject   3536  ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHL  3631

Range 5: 3533 to 3631 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.6 bits(150) 0.0 33/33(100%) 0/33(0%) Minus/Minus
Query       20  *VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI  118
                *VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI
Subject   3533  *VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI  3631

Range 6: 3535 to 3591 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.4 bits(95) 0.0 18/19(95%) 0/19(0%) Plus/Plus
Query       22  YFVWGESRIGARRFLEASL  78
                YFVWGESRIG RRFLEASL
Subject   3535  YFVWGESRIGVRRFLEASL  3591

Grapevine leafroll associated virus 3 isolate 6 18 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130300.1 Length: 4711 Number of Matches: 6

Range 1: 3535 to 3630 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
85.4 bits(180) 0.0 31/32(97%) 0/32(0%) Minus/Minus
Query       22  KCCSTFPPPCLPTQTSFKESTRPNPRFSPDKI  117
                KCCSTFPPPCLPTQTSFKEST PNPRFSPDKI
Subject   3535  KCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI  3630

Range 2: 3534 to 3632 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
77.6 bits(163) 0.0 33/33(100%) 0/33(0%) Plus/Plus
Query       21  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY  119
                IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY
Subject   3534  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY  3632

Range 3: 3534 to 3632 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.3 bits(158) 0.0 32/33(97%) 0/33(0%) Minus/Minus
Query       21  VSAVVRFHLLVYLRKLASRNLRAPILDSPQTKY  119
                VSAVVRFHLLVYLRKLASRNLR PILDSPQTKY
Subject   3534  VSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY  3632

Range 4: 3536 to 3631 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
74.4 bits(156) 0.0 31/32(97%) 0/32(0%) Plus/Plus
Query       23  ILSGENRGLGRVDSLKLVCVGRQGGGNVLQHL  118
                ILSGENRGLG VDSLKLVCVGRQGGGNVLQHL
Subject   3536  ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHL  3631

Range 5: 3533 to 3631 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.6 bits(150) 0.0 33/33(100%) 0/33(0%) Minus/Minus
Query       20  *VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI  118
                *VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI
Subject   3533  *VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI  3631

Range 6: 3535 to 3591 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.4 bits(95) 0.0 18/19(95%) 0/19(0%) Plus/Plus
Query       22  YFVWGESRIGARRFLEASL  78
                YFVWGESRIG RRFLEASL
Subject   3535  YFVWGESRIGVRRFLEASL  3591

Grapevine leafroll associated virus 3 isolate 6 102 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130301.1 Length: 4711 Number of Matches: 6

Range 1: 3535 to 3630 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
85.4 bits(180) 0.0 31/32(97%) 0/32(0%) Minus/Minus
Query       22  KCCSTFPPPCLPTQTSFKESTRPNPRFSPDKI  117
                KCCSTFPPPCLPTQTSFKEST PNPRFSPDKI
Subject   3535  KCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI  3630

Range 2: 3534 to 3632 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
77.6 bits(163) 0.0 33/33(100%) 0/33(0%) Plus/Plus
Query       21  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY  119
                IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY
Subject   3534  IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY  3632

Range 3: 3534 to 3632 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.3 bits(158) 0.0 32/33(97%) 0/33(0%) Minus/Minus
Query       21  VSAVVRFHLLVYLRKLASRNLRAPILDSPQTKY  119
                VSAVVRFHLLVYLRKLASRNLR PILDSPQTKY
Subject   3534  VSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY  3632

Range 4: 3536 to 3631 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
74.4 bits(156) 0.0 31/32(97%) 0/32(0%) Plus/Plus
Query       23  ILSGENRGLGRVDSLKLVCVGRQGGGNVLQHL  118
                ILSGENRGLG VDSLKLVCVGRQGGGNVLQHL
Subject   3536  ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHL  3631

Range 5: 3533 to 3631 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.6 bits(150) 0.0 33/33(100%) 0/33(0%) Minus/Minus
Query       20  *VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI  118
                *VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI
Subject   3533  *VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI  3631

Range 6: 3535 to 3591 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.4 bits(95) 0.0 18/19(95%) 0/19(0%) Plus/Plus
Query       22  YFVWGESRIGARRFLEASL  78
                YFVWGESRIG RRFLEASL
Subject   3535  YFVWGESRIGVRRFLEASL  3591

Nucleotide Sequence (1073 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
108
216
324
432
540
648
756
864
972
1073

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
87.2 489.8 3% 4.259e-15 97% JX559645.1
87.2 485.2 4% 4.259e-15 94% NC_004667.1
87.2 485.2 4% 4.259e-15 94% AF037268.2
87.2 489.8 3% 4.259e-15 97% GQ352631.1
87.2 489.8 3% 4.259e-15 97% GU983863.1

Alignments

Grapevine leafroll associated virus 3 isolate 3138 07, complete genome

Sequence ID: JX559645.1 Length: 18498 Number of Matches: 6

Range 1: 5404 to 5499 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
87.2 bits(184) 0.0 32/32(100%) 0/32(0%) Plus/Minus
Query      976  HEATLMKHGYHHYRYTPHPALRKRPHSSLSSY  1071
                HEATLMKHGYHHYRYTPHPALRKRPHSSLSSY
Subject   5404  HEATLMKHGYHHYRYTPHPALRKRPHSSLSSY  5499

Range 2: 5403 to 5504 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
85.8 bits(181) 0.0 33/34(97%) 0/34(0%) Minus/Plus
Query      971  DNLKGRSAVFFSKLGEGYTYNGGSHVSSGWPRVV  1072
                DNLKGRSAVFFSKLGEGYTYNGGSHVSSGWPRV+
Subject   5403  DNLKGRSAVFFSKLGEGYTYNGGSHVSSGWPRVL  5504

Range 3: 5402 to 5500 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.5 bits(178) 0.0 33/33(100%) 0/33(0%) Plus/Minus
Query      975  TRGHPDETWLPPL*VYPSPSFEKKTALLPFKLS  1073
                TRGHPDETWLPPL*VYPSPSFEKKTALLPFKLS
Subject   5402  TRGHPDETWLPPL*VYPSPSFEKKTALLPFKLS  5500

Range 4: 5402 to 5500 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
81.7 bits(172) 0.0 33/33(100%) 0/33(0%) Minus/Plus
Query      975  R*LEREECGLFLKAG*GVYL*WW*PCFIRVASC  1073
                R*LEREECGLFLKAG*GVYL*WW*PCFIRVASC
Subject   5402  R*LEREECGLFLKAG*GVYL*WW*PCFIRVASC  5500

Range 5: 5404 to 5499 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.7 bits(161) 0.0 32/32(100%) 0/32(0%) Minus/Plus
Query      976  IT*KGGVRSFSQSWVRGIPIMVVAMFHQGGLV  1071
                IT*KGGVRSFSQSWVRGIPIMVVAMFHQGGLV
Subject   5404  IT*KGGVRSFSQSWVRGIPIMVVAMFHQGGLV  5499

Range 6: 5403 to 5501 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.9 bits(155) 0.0 32/33(97%) 0/33(0%) Plus/Minus
Query      974  NTRPP**NMATTIIGIPLTQL*EKDRTPPFQVI  1072
                +TRPP**NMATTIIGIPLTQL*EKDRTPPFQVI
Subject   5403  DTRPP**NMATTIIGIPLTQL*EKDRTPPFQVI  5501

Grapevine leafroll associated virus 3, complete genome

Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 6

Range 1: 4825 to 4920 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
87.2 bits(184) 0.0 32/32(100%) 0/32(0%) Plus/Minus
Query      976  HEATLMKHGYHHYRYTPHPALRKRPHSSLSSY  1071
                HEATLMKHGYHHYRYTPHPALRKRPHSSLSSY
Subject   4825  HEATLMKHGYHHYRYTPHPALRKRPHSSLSSY  4920

Range 2: 4824 to 4925 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.0 bits(177) 0.0 32/34(94%) 0/34(0%) Minus/Plus
Query      971  DNLKGRSAVFFSKLGEGYTYNGGSHVSSGWPRVV  1072
                DNLKGRSAVFFSKLGEGYTYNGGSHVSSGWPR +
Subject   4824  DNLKGRSAVFFSKLGEGYTYNGGSHVSSGWPRAL  4925

Range 3: 4823 to 4918 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.2 bits(173) 0.0 32/32(100%) 0/32(0%) Plus/Minus
Query      978  RGHPDETWLPPL*VYPSPSFEKKTALLPFKLS  1073
                RGHPDETWLPPL*VYPSPSFEKKTALLPFKLS
Subject   4823  RGHPDETWLPPL*VYPSPSFEKKTALLPFKLS  4918

Range 4: 4823 to 4921 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
81.7 bits(172) 0.0 33/33(100%) 0/33(0%) Minus/Plus
Query      975  R*LEREECGLFLKAG*GVYL*WW*PCFIRVASC  1073
                R*LEREECGLFLKAG*GVYL*WW*PCFIRVASC
Subject   4823  R*LEREECGLFLKAG*GVYL*WW*PCFIRVASC  4921

Range 5: 4825 to 4920 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.7 bits(161) 0.0 32/32(100%) 0/32(0%) Minus/Plus
Query      976  IT*KGGVRSFSQSWVRGIPIMVVAMFHQGGLV  1071
                IT*KGGVRSFSQSWVRGIPIMVVAMFHQGGLV
Subject   4825  IT*KGGVRSFSQSWVRGIPIMVVAMFHQGGLV  4920

Range 6: 4824 to 4919 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.5 bits(154) 0.0 32/32(100%) 0/32(0%) Plus/Minus
Query      977  TRPP**NMATTIIGIPLTQL*EKDRTPPFQVI  1072
                TRPP**NMATTIIGIPLTQL*EKDRTPPFQVI
Subject   4824  TRPP**NMATTIIGIPLTQL*EKDRTPPFQVI  4919

Grapevine leafroll associated virus 3, complete genome

Sequence ID: AF037268.2 Length: 17919 Number of Matches: 6

Range 1: 4825 to 4920 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
87.2 bits(184) 0.0 32/32(100%) 0/32(0%) Plus/Minus
Query      976  HEATLMKHGYHHYRYTPHPALRKRPHSSLSSY  1071
                HEATLMKHGYHHYRYTPHPALRKRPHSSLSSY
Subject   4825  HEATLMKHGYHHYRYTPHPALRKRPHSSLSSY  4920

Range 2: 4824 to 4925 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.0 bits(177) 0.0 32/34(94%) 0/34(0%) Minus/Plus
Query      971  DNLKGRSAVFFSKLGEGYTYNGGSHVSSGWPRVV  1072
                DNLKGRSAVFFSKLGEGYTYNGGSHVSSGWPR +
Subject   4824  DNLKGRSAVFFSKLGEGYTYNGGSHVSSGWPRAL  4925

Range 3: 4823 to 4918 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.2 bits(173) 0.0 32/32(100%) 0/32(0%) Plus/Minus
Query      978  RGHPDETWLPPL*VYPSPSFEKKTALLPFKLS  1073
                RGHPDETWLPPL*VYPSPSFEKKTALLPFKLS
Subject   4823  RGHPDETWLPPL*VYPSPSFEKKTALLPFKLS  4918

Range 4: 4823 to 4921 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
81.7 bits(172) 0.0 33/33(100%) 0/33(0%) Minus/Plus
Query      975  R*LEREECGLFLKAG*GVYL*WW*PCFIRVASC  1073
                R*LEREECGLFLKAG*GVYL*WW*PCFIRVASC
Subject   4823  R*LEREECGLFLKAG*GVYL*WW*PCFIRVASC  4921

Range 5: 4825 to 4920 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.7 bits(161) 0.0 32/32(100%) 0/32(0%) Minus/Plus
Query      976  IT*KGGVRSFSQSWVRGIPIMVVAMFHQGGLV  1071
                IT*KGGVRSFSQSWVRGIPIMVVAMFHQGGLV
Subject   4825  IT*KGGVRSFSQSWVRGIPIMVVAMFHQGGLV  4920

Range 6: 4824 to 4919 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.5 bits(154) 0.0 32/32(100%) 0/32(0%) Plus/Minus
Query      977  TRPP**NMATTIIGIPLTQL*EKDRTPPFQVI  1072
                TRPP**NMATTIIGIPLTQL*EKDRTPPFQVI
Subject   4824  TRPP**NMATTIIGIPLTQL*EKDRTPPFQVI  4919

Grapevine leafroll associated virus 3 isolate 621, complete genome

Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 6

Range 1: 5404 to 5499 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
87.2 bits(184) 0.0 32/32(100%) 0/32(0%) Plus/Minus
Query      976  HEATLMKHGYHHYRYTPHPALRKRPHSSLSSY  1071
                HEATLMKHGYHHYRYTPHPALRKRPHSSLSSY
Subject   5404  HEATLMKHGYHHYRYTPHPALRKRPHSSLSSY  5499

Range 2: 5403 to 5504 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
85.8 bits(181) 0.0 33/34(97%) 0/34(0%) Minus/Plus
Query      971  DNLKGRSAVFFSKLGEGYTYNGGSHVSSGWPRVV  1072
                DNLKGRSAVFFSKLGEGYTYNGGSHVSSGWPRV+
Subject   5403  DNLKGRSAVFFSKLGEGYTYNGGSHVSSGWPRVL  5504

Range 3: 5402 to 5500 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.5 bits(178) 0.0 33/33(100%) 0/33(0%) Plus/Minus
Query      975  TRGHPDETWLPPL*VYPSPSFEKKTALLPFKLS  1073
                TRGHPDETWLPPL*VYPSPSFEKKTALLPFKLS
Subject   5402  TRGHPDETWLPPL*VYPSPSFEKKTALLPFKLS  5500

Range 4: 5402 to 5500 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
81.7 bits(172) 0.0 33/33(100%) 0/33(0%) Minus/Plus
Query      975  R*LEREECGLFLKAG*GVYL*WW*PCFIRVASC  1073
                R*LEREECGLFLKAG*GVYL*WW*PCFIRVASC
Subject   5402  R*LEREECGLFLKAG*GVYL*WW*PCFIRVASC  5500

Range 5: 5404 to 5499 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.7 bits(161) 0.0 32/32(100%) 0/32(0%) Minus/Plus
Query      976  IT*KGGVRSFSQSWVRGIPIMVVAMFHQGGLV  1071
                IT*KGGVRSFSQSWVRGIPIMVVAMFHQGGLV
Subject   5404  IT*KGGVRSFSQSWVRGIPIMVVAMFHQGGLV  5499

Range 6: 5403 to 5501 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.9 bits(155) 0.0 32/33(97%) 0/33(0%) Plus/Minus
Query      974  NTRPP**NMATTIIGIPLTQL*EKDRTPPFQVI  1072
                +TRPP**NMATTIIGIPLTQL*EKDRTPPFQVI
Subject   5403  DTRPP**NMATTIIGIPLTQL*EKDRTPPFQVI  5501

Grapevine leafroll associated virus 3 isolate WA MR, complete genome

Sequence ID: GU983863.1 Length: 18498 Number of Matches: 6

Range 1: 5404 to 5499 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
87.2 bits(184) 0.0 32/32(100%) 0/32(0%) Plus/Minus
Query      976  HEATLMKHGYHHYRYTPHPALRKRPHSSLSSY  1071
                HEATLMKHGYHHYRYTPHPALRKRPHSSLSSY
Subject   5404  HEATLMKHGYHHYRYTPHPALRKRPHSSLSSY  5499

Range 2: 5403 to 5504 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
85.8 bits(181) 0.0 33/34(97%) 0/34(0%) Minus/Plus
Query      971  DNLKGRSAVFFSKLGEGYTYNGGSHVSSGWPRVV  1072
                DNLKGRSAVFFSKLGEGYTYNGGSHVSSGWPRV+
Subject   5403  DNLKGRSAVFFSKLGEGYTYNGGSHVSSGWPRVL  5504

Range 3: 5402 to 5500 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.5 bits(178) 0.0 33/33(100%) 0/33(0%) Plus/Minus
Query      975  TRGHPDETWLPPL*VYPSPSFEKKTALLPFKLS  1073
                TRGHPDETWLPPL*VYPSPSFEKKTALLPFKLS
Subject   5402  TRGHPDETWLPPL*VYPSPSFEKKTALLPFKLS  5500

Range 4: 5402 to 5500 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
81.7 bits(172) 0.0 33/33(100%) 0/33(0%) Minus/Plus
Query      975  R*LEREECGLFLKAG*GVYL*WW*PCFIRVASC  1073
                R*LEREECGLFLKAG*GVYL*WW*PCFIRVASC
Subject   5402  R*LEREECGLFLKAG*GVYL*WW*PCFIRVASC  5500

Range 5: 5404 to 5499 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.7 bits(161) 0.0 32/32(100%) 0/32(0%) Minus/Plus
Query      976  IT*KGGVRSFSQSWVRGIPIMVVAMFHQGGLV  1071
                IT*KGGVRSFSQSWVRGIPIMVVAMFHQGGLV
Subject   5404  IT*KGGVRSFSQSWVRGIPIMVVAMFHQGGLV  5499

Range 6: 5403 to 5501 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.9 bits(155) 0.0 32/33(97%) 0/33(0%) Plus/Minus
Query      974  NTRPP**NMATTIIGIPLTQL*EKDRTPPFQVI  1072
                +TRPP**NMATTIIGIPLTQL*EKDRTPPFQVI
Subject   5403  DTRPP**NMATTIIGIPLTQL*EKDRTPPFQVI  5501

Nucleotide Sequence (378 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
38
76
114
152
190
228
266
304
342
378

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
192.6 1013.5 28% 1.947e-47 91% KM058745.1
172.9 370.2 20% 1.661e-41 45% JX559645.1
172.9 368.4 20% 1.661e-41 43% NC_004667.1
172.9 368.4 20% 1.661e-41 43% AF037268.2
172.9 370.2 20% 1.661e-41 45% GQ352631.1

Alignments

Grapevine leafroll associated virus 3 isolate GH24, complete genome

Sequence ID: KM058745.1 Length: 18493 Number of Matches: 6

Range 1: 7050 to 7289 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
192.6 bits(414) 0.0 79/80(99%) 0/80(0%) Plus/Minus
Query       52  NMGLLREKRVVSLLRPEKHYVRKSLPLGFMDCHNWYILPLTFKRPLHVRLLQLGHAQVNISIYLSHIVGSTYRPF**RPH  291
                NMGLLREKRVVSLLRPEKHYVRKSLPLGFMDCHNWYILPLTFKRPLHVRLLQLGHAQVNISIYLSHIVGSTYRPF**R H
Subject   7050  NMGLLREKRVVSLLRPEKHYVRKSLPLGFMDCHNWYILPLTFKRPLHVRLLQLGHAQVNISIYLSHIVGSTYRPF**RSH  7289

Range 2: 7056 to 7289 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
186.2 bits(400) 0.0 78/78(100%) 0/78(0%) Minus/Plus
Query       52  SLSKRPIGTTDDVAEIDADVYLCMTQLEKSDMKRTLKGKGKDVPVMTVHEAQGKTFANVVLFRTKKADDTLFTKQPHI  285
                SLSKRPIGTTDDVAEIDADVYLCMTQLEKSDMKRTLKGKGKDVPVMTVHEAQGKTFANVVLFRTKKADDTLFTKQPHI
Subject   7056  SLSKRPIGTTDDVAEIDADVYLCMTQLEKSDMKRTLKGKGKDVPVMTVHEAQGKTFANVVLFRTKKADDTLFTKQPHI  7289

Range 3: 7057 to 7320 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
182.5 bits(392) 0.0 80/88(91%) 0/88(0%) Minus/Plus
Query       21  LYQKGL*VLPTMWLR*MLMFTCA*PSWRSRT*RGRLKVRGRMYQL*QSMKPRGRLLRT*CFSGRRRLTTRFSRSNPIFPTLIQTHPTH  284
                LYQKGL*VLPTMWLR*MLMFTCA*PSWRSRT*RGRLKVRGRMYQL*QSMKPRGRLLRT*CFSGRRRLTTRFSRSNPIF +  Q    H
Subject   7057  LYQKGL*VLPTMWLR*MLMFTCA*PSWRSRT*RGRLKVRGRMYQL*QSMKPRGRLLRT*CFSGRRRLTTRFSRSNPIFSSAYQGTLVH  7320

Range 4: 7055 to 7288 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
161.9 bits(347) 0.0 78/78(100%) 0/78(0%) Plus/Minus
Query       53  IWGCFVKSVSSAFFVLKSTTFAKVFPWASWTVITGTSFPLPLSVLFMSDFSNWVMHKXXXXXXXXXXXVVPIGLFDKD  286
                IWGCFVKSVSSAFFVLKSTTFAKVFPWASWTVITGTSFPLPLSVLFMSDFSNWVMHK*TSASISATSSVVPIGLFDKD
Subject   7055  IWGCFVKSVSSAFFVLKSTTFAKVFPWASWTVITGTSFPLPLSVLFMSDFSNWVMHK*TSASISATSSVVPIGLFDKD  7288

Range 5: 7115 to 7306 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
150.0 bits(321) 0.0 62/64(97%) 0/64(0%) Minus/Plus
Query       35  LLVHDPVGEVGHEEDA*R*GEGCTSYDSP*SPGEDFCERSAFQDEEG*RHAFHEATPYSRPLSK  226
                LLVHDPVGEVGHEEDA*R*GEGCTSYDSP*SPGEDFCERSAFQDEEG*RHAFHEATPYSR L K
Subject   7115  LLVHDPVGEVGHEEDA*R*GEGCTSYDSP*SPGEDFCERSAFQDEEG*RHAFHEATPYSRRLIK  7306

Range 6: 7057 to 7293 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
140.4 bits(300) 0.0 79/79(100%) 0/79(0%) Plus/Minus
Query       48  REYGVAS*KACRQPSSS*KALRSQKSSPGLHGLS*LVHPSPYL*AXXXXXXXXXXXXXXKHQHLSQPHRR*YL*AFLIK  284
                REYGVAS*KACRQPSSS*KALRSQKSSPGLHGLS*LVHPSPYL*ASSSCPTSPTGSCTSKHQHLSQPHRR*YL*AFLIK
Subject   7057  REYGVAS*KACRQPSSS*KALRSQKSSPGLHGLS*LVHPSPYL*ASSSCPTSPTGSCTSKHQHLSQPHRR*YL*AFLIK  7293

Grapevine leafroll associated virus 3 isolate 3138 07, complete genome

Sequence ID: JX559645.1 Length: 18498 Number of Matches: 3

Range 1: 7056 to 7289 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
172.9 bits(371) 0.0 71/78(91%) 0/78(0%) Minus/Plus
Query       52  SLSKRPIGTTDDVAEIDADVYLCMTQLEKSDMKRTLKGKGKDVPVMTVHEAQGKTFANVVLFRTKKADDTLFTKQPHI  285
                SLSKRPIGTTDDVAEI+ADVYLCMTQLEKSDMKR+LKGKGK+ PVMTVHEAQGKTF++VVLFRTKKADD+LFTKQPHI
Subject   7056  SLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHI  7289

Range 2: 7055 to 7288 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.0 bits(225) 0.0 56/78(72%) 0/78(0%) Plus/Minus
Query       53  IWGCFVKSVSSAFFVLKSTTFAKVFPWASWTVITGTSFPLPLSVLFMSDFSNWVMHKXXXXXXXXXXXVVPIGLFDKD  286
                I GC V   SSAFFVL +TT   VFP AS TVITG SFP P + LF+SDFSNWVMHK TSA ISATSSVVPIGL D D
Subject   7055  ICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPIGLLDSD  7288

Range 3: 7065 to 7286 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.3 bits(193) 0.0 33/74(45%) 0/74(0%) Plus/Minus
Query       55  MGLLREKRVVSLLRPEKHYVRKSLPLGFMDCHNWYILPLTFKRPLHVRLLQLGHAQVNISIYLSHIVGSTYRPF  276
                M L  E  V+ LLRP+++++ +   L FM CH+W     + +RPLH+RLLQLGHAQV++S+Y S+++  +  PF
Subject   7065  MRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVSVYFSYVISGSNWPF  7286

Grapevine leafroll associated virus 3, complete genome

Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 3

Range 1: 6477 to 6710 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
172.9 bits(371) 0.0 71/78(91%) 0/78(0%) Minus/Plus
Query       52  SLSKRPIGTTDDVAEIDADVYLCMTQLEKSDMKRTLKGKGKDVPVMTVHEAQGKTFANVVLFRTKKADDTLFTKQPHI  285
                SLSKRPIGTTDDVAEI+ADVYLCMTQLEKSDMKR+LKGKGK+ PVMTVHEAQGKTF++VVLFRTKKADD+LFTKQPHI
Subject   6477  SLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHI  6710

Range 2: 6476 to 6709 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.0 bits(225) 0.0 56/78(72%) 0/78(0%) Plus/Minus
Query       53  IWGCFVKSVSSAFFVLKSTTFAKVFPWASWTVITGTSFPLPLSVLFMSDFSNWVMHKXXXXXXXXXXXVVPIGLFDKD  286
                I GC V   SSAFFVL +TT   VFP AS TVITG SFP P + LF+SDFSNWVMHK TSA ISATSSVVPIGL D D
Subject   6476  ICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPIGLLDSD  6709

Range 3: 6486 to 6707 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
89.5 bits(189) 0.0 32/74(43%) 0/74(0%) Plus/Minus
Query       55  MGLLREKRVVSLLRPEKHYVRKSLPLGFMDCHNWYILPLTFKRPLHVRLLQLGHAQVNISIYLSHIVGSTYRPF  276
                M L  E  V+  LRP+++++ +   L FM CH+W     + +RPLH+RLLQLGHAQV++S+Y S+++  +  PF
Subject   6486  MRLFSE*GVIGFLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVSVYFSYVISGSNWPF  6707

Grapevine leafroll associated virus 3, complete genome

Sequence ID: AF037268.2 Length: 17919 Number of Matches: 3

Range 1: 6477 to 6710 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
172.9 bits(371) 0.0 71/78(91%) 0/78(0%) Minus/Plus
Query       52  SLSKRPIGTTDDVAEIDADVYLCMTQLEKSDMKRTLKGKGKDVPVMTVHEAQGKTFANVVLFRTKKADDTLFTKQPHI  285
                SLSKRPIGTTDDVAEI+ADVYLCMTQLEKSDMKR+LKGKGK+ PVMTVHEAQGKTF++VVLFRTKKADD+LFTKQPHI
Subject   6477  SLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHI  6710

Range 2: 6476 to 6709 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.0 bits(225) 0.0 56/78(72%) 0/78(0%) Plus/Minus
Query       53  IWGCFVKSVSSAFFVLKSTTFAKVFPWASWTVITGTSFPLPLSVLFMSDFSNWVMHKXXXXXXXXXXXVVPIGLFDKD  286
                I GC V   SSAFFVL +TT   VFP AS TVITG SFP P + LF+SDFSNWVMHK TSA ISATSSVVPIGL D D
Subject   6476  ICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPIGLLDSD  6709

Range 3: 6486 to 6707 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
89.5 bits(189) 0.0 32/74(43%) 0/74(0%) Plus/Minus
Query       55  MGLLREKRVVSLLRPEKHYVRKSLPLGFMDCHNWYILPLTFKRPLHVRLLQLGHAQVNISIYLSHIVGSTYRPF  276
                M L  E  V+  LRP+++++ +   L FM CH+W     + +RPLH+RLLQLGHAQV++S+Y S+++  +  PF
Subject   6486  MRLFSE*GVIGFLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVSVYFSYVISGSNWPF  6707

Grapevine leafroll associated virus 3 isolate 621, complete genome

Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 3

Range 1: 7056 to 7289 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
172.9 bits(371) 0.0 71/78(91%) 0/78(0%) Minus/Plus
Query       52  SLSKRPIGTTDDVAEIDADVYLCMTQLEKSDMKRTLKGKGKDVPVMTVHEAQGKTFANVVLFRTKKADDTLFTKQPHI  285
                SLSKRPIGTTDDVAEI+ADVYLCMTQLEKSDMKR+LKGKGK+ PVMTVHEAQGKTF++VVLFRTKKADD+LFTKQPHI
Subject   7056  SLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHI  7289

Range 2: 7055 to 7288 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.0 bits(225) 0.0 56/78(72%) 0/78(0%) Plus/Minus
Query       53  IWGCFVKSVSSAFFVLKSTTFAKVFPWASWTVITGTSFPLPLSVLFMSDFSNWVMHKXXXXXXXXXXXVVPIGLFDKD  286
                I GC V   SSAFFVL +TT   VFP AS TVITG SFP P + LF+SDFSNWVMHK TSA ISATSSVVPIGL D D
Subject   7055  ICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPIGLLDSD  7288

Range 3: 7065 to 7286 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.3 bits(193) 0.0 33/74(45%) 0/74(0%) Plus/Minus
Query       55  MGLLREKRVVSLLRPEKHYVRKSLPLGFMDCHNWYILPLTFKRPLHVRLLQLGHAQVNISIYLSHIVGSTYRPF  276
                M L  E  V+ LLRP+++++ +   L FM CH+W     + +RPLH+RLLQLGHAQV++S+Y S+++  +  PF
Subject   7065  MRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVSVYFSYVISGSNWPF  7286

Nucleotide Sequence (324 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
33
66
99
132
165
198
231
264
297
324

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
270.5 1386.8 39% 5.204e-71 96% KJ174518.1
270.0 1397.5 46% 7.149e-71 99% KX701860.1
267.7 1375.4 39% 3.499e-70 97% GQ352632.1
267.3 1398.0 46% 4.807e-70 99% EU259806.1
262.2 1368.0 39% 1.582e-68 94% KX756668.1

Alignments

Grapevine leafroll associated virus 3, complete genome

Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 8

Range 1: 3944 to 4264 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
270.5 bits(584) 0.0 106/107(99%) 0/107(0%) Plus/Plus
Query        2  AYWDFCGVFGCGPCCMEVQARNCGLRQKICGQ*LRNSKLIEFSSRWWFTRYNR*HSIRRVICCAKRVFVGCGRHQGDRS*TSSPLSAVIVFYLIRHFRLQYARHLGT  322
                AYWDFCGVFGCGPCCMEVQARNCGLRQKICGQ*LRNSKLIEFSSRWWFTRYNR*HSIRRVICCAKRVFVGCGRHQGDRS*TSSPLSAVIVFYLI HFRLQYARHLGT
Subject   3944  AYWDFCGVFGCGPCCMEVQARNCGLRQKICGQ*LRNSKLIEFSSRWWFTRYNR*HSIRRVICCAKRVFVGCGRHQGDRS*TSSPLSAVIVFYLIHHFRLQYARHLGT  4264

Range 2: 3943 to 4266 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
262.7 bits(567) 0.0 107/108(99%) 0/108(0%) Minus/Minus
Query        1  RVPKCLAYCSRKWRMR*KTITALRGLDV*LRSPW*RPQPTKTLFAQQMTRRILC*RLYRVNHQRLENSMSLEFRNYCPHIFWRKPQFRACTSMQQGPHPKTPQKSQ*A  324
                RVPKCLAYCSRKW MR*KTITALRGLDV*LRSPW*RPQPTKTLFAQQMTRRILC*RLYRVNHQRLENSMSLEFRNYCPHIFWRKPQFRACTSMQQGPHPKTPQKSQ*A
Subject   3943  RVPKCLAYCSRKWCMR*KTITALRGLDV*LRSPW*RPQPTKTLFAQQMTRRILC*RLYRVNHQRLENSMSLEFRNYCPHIFWRKPQFRACTSMQQGPHPKTPQKSQ*A  4266

Range 3: 3943 to 4266 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
262.2 bits(566) 0.0 107/108(99%) 0/108(0%) Plus/Plus
Query        1  CLLGFLWRLWVRPLLHGSTGAELRLTPEDMRAVVTKL*AH*VLKPLVVYAV*PLAQYPAGHLLCEEGFRRLWPSPGRP*LNVKSP*RCYRFLPHTPFPAAVC*AFGHT  324
                CLLGFLWRLWVRPLLHGSTGAELRL PEDMRAVVTKL*AH*VLKPLVVYAV*PLAQYPAGHLLCEEGFRRLWPSPGRP*LNVKSP*RCYRFLPHTPFPAAVC*AFGHT
Subject   3943  CLLGFLWRLWVRPLLHGSTGAELRLAPEDMRAVVTKL*AH*VLKPLVVYAV*PLAQYPAGHLLCEEGFRRLWPSPGRP*LNVKSP*RCYRFLPHTPFPAAVC*AFGHT  4266

Range 4: 3945 to 4265 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
249.0 bits(537) 0.0 106/107(99%) 0/107(0%) Minus/Minus
Query        3  VCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPGDGHSRRKPSSHNK*PAGYCASGYTA*TTSGLRTQ*A*SFVTTARISSGVSRNSAPVLPCNRGRTQRRHKNPNK  323
                VCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPGDGHSRRKPSSHNK*PAGYCASGYTA*TTSGLRTQ*A*SFVTTARISSG SRNSAPVLPCNRGRTQRRHKNPNK
Subject   3945  VCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPGDGHSRRKPSSHNK*PAGYCASGYTA*TTSGLRTQ*A*SFVTTARISSGASRNSAPVLPCNRGRTQRRHKNPNK  4265

Range 5: 3944 to 4150 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
129.8 bits(277) 0.0 68/69(99%) 0/69(0%) Minus/Minus
Query        2  DENPLRTTNDPPDTVLAVIPRKPPAA*ELNELRVSXXXXXXXXXXXAIPRLYFHATGAAPKDATKIPIS  208
                DENPLRTTNDPPDTVLAVIPRKPPAA*ELNELRVS*LLPAYLLA AAIPRLYFHATGAAPKDATKIPIS
Subject   3944  DENPLRTTNDPPDTVLAVIPRKPPAA*ELNELRVS*LLPAYLLAQAAIPRLYFHATGAAPKDATKIPIS  4150

Range 6: 4193 to 4264 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.8 bits(122) 0.0 23/24(96%) 0/24(0%) Minus/Minus
Query      251  CAQMPSILQPEMAYEVENDNSAKG  322
                CAQMPSILQPEM YEVENDNSAKG
Subject   4193  CAQMPSILQPEMVYEVENDNSAKG  4264

Range 7: 4071 to 4265 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.0 bits(238) 0.0 64/65(98%) 0/65(0%) Plus/Plus
Query      129  QAAGGLRGITASTVSGGSFVVRRGFSSXXXXXXXXXXXXXXPLALLSFSTSYAISGCSMLGIWAH  323
                QAAGGLRGITASTVSGGSFVVRRGFSSAVAVTRATVAKRQVPLALLSFSTSY ISGCSMLGIWAH
Subject   4071  QAAGGLRGITASTVSGGSFVVRRGFSSAVAVTRATVAKRQVPLALLSFSTSYTISGCSMLGIWAH  4265

Range 8: 3945 to 3995 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.8 bits(85) 0.0 17/17(100%) 0/17(0%) Plus/Plus
Query        3  LIGIFVASLGAAPVAWK  53
                LIGIFVASLGAAPVAWK
Subject   3945  LIGIFVASLGAAPVAWK  3995

Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome

Sequence ID: KX701860.1 Length: 18020 Number of Matches: 9

Range 1: 3462 to 3782 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
270.0 bits(583) 0.0 106/107(99%) 0/107(0%) Plus/Plus
Query        2  AYWDFCGVFGCGPCCMEVQARNCGLRQKICGQ*LRNSKLIEFSSRWWFTRYNR*HSIRRVICCAKRVFVGCGRHQGDRS*TSSPLSAVIVFYLIRHFRLQYARHLGT  322
                AYWDFCGVFGC PCCMEVQARNCGLRQKICGQ*LRNSKLIEFSSRWWFTRYNR*HSIRRVICCAKRVFVGCGRHQGDRS*TSSPLSAVIVFYLIRHFRLQYARHLGT
Subject   3462  AYWDFCGVFGCSPCCMEVQARNCGLRQKICGQ*LRNSKLIEFSSRWWFTRYNR*HSIRRVICCAKRVFVGCGRHQGDRS*TSSPLSAVIVFYLIRHFRLQYARHLGT  3782

Range 2: 3461 to 3784 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
262.7 bits(567) 0.0 107/108(99%) 0/108(0%) Plus/Plus
Query        1  CLLGFLWRLWVRPLLHGSTGAELRLTPEDMRAVVTKL*AH*VLKPLVVYAV*PLAQYPAGHLLCEEGFRRLWPSPGRP*LNVKSP*RCYRFLPHTPFPAAVC*AFGHT  324
                CLLGFLWRLWV+PLLHGSTGAELRLTPEDMRAVVTKL*AH*VLKPLVVYAV*PLAQYPAGHLLCEEGFRRLWPSPGRP*LNVKSP*RCYRFLPHTPFPAAVC*AFGHT
Subject   3461  CLLGFLWRLWVQPLLHGSTGAELRLTPEDMRAVVTKL*AH*VLKPLVVYAV*PLAQYPAGHLLCEEGFRRLWPSPGRP*LNVKSP*RCYRFLPHTPFPAAVC*AFGHT  3784

Range 3: 3461 to 3784 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
261.8 bits(565) 0.0 107/108(99%) 0/108(0%) Minus/Minus
Query        1  RVPKCLAYCSRKWRMR*KTITALRGLDV*LRSPW*RPQPTKTLFAQQMTRRILC*RLYRVNHQRLENSMSLEFRNYCPHIFWRKPQFRACTSMQQGPHPKTPQKSQ*A  324
                RVPKCLAYCSRKWRMR*KTITALRGLDV*LRSPW*RPQPTKTLFAQQMTRRILC*RLYRVNHQRLENSMSLEFRNYCPHIFWRKPQFRACTSMQQG HPKTPQKSQ*A
Subject   3461  RVPKCLAYCSRKWRMR*KTITALRGLDV*LRSPW*RPQPTKTLFAQQMTRRILC*RLYRVNHQRLENSMSLEFRNYCPHIFWRKPQFRACTSMQQGLHPKTPQKSQ*A  3784

Range 4: 3463 to 3783 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
247.1 bits(533) 0.0 106/107(99%) 0/107(0%) Minus/Minus
Query        3  VCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPGDGHSRRKPSSHNK*PAGYCASGYTA*TTSGLRTQ*A*SFVTTARISSGVSRNSAPVLPCNRGRTQRRHKNPNK  323
                VCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPGDGHSRRKPSSHNK*PAGYCASGYTA*TTSGLRTQ*A*SFVTTARISSGVSRNSAPVLPCNRG TQRRHKNPNK
Subject   3463  VCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPGDGHSRRKPSSHNK*PAGYCASGYTA*TTSGLRTQ*A*SFVTTARISSGVSRNSAPVLPCNRGCTQRRHKNPNK  3783

Range 5: 3564 to 3668 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.0 bits(177) 0.0 35/35(100%) 0/35(0%) Minus/Minus
Query      104  DENPLRTTNDPPDTVLAVIPRKPPAA*ELNELRVS  208
                DENPLRTTNDPPDTVLAVIPRKPPAA*ELNELRVS
Subject   3564  DENPLRTTNDPPDTVLAVIPRKPPAA*ELNELRVS  3668

Range 6: 3711 to 3782 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
60.6 bits(126) 0.0 24/24(100%) 0/24(0%) Minus/Minus
Query      251  CAQMPSILQPEMAYEVENDNSAKG  322
                CAQMPSILQPEMAYEVENDNSAKG
Subject   3711  CAQMPSILQPEMAYEVENDNSAKG  3782

Range 7: 3462 to 3527 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.6 bits(115) 0.0 22/22(100%) 0/22(0%) Minus/Minus
Query        2  IPRLYFHATGAAPKDATKIPIS  67
                IPRLYFHATGAAPKDATKIPIS
Subject   3462  IPRLYFHATGAAPKDATKIPIS  3527

Range 8: 3589 to 3783 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
113.8 bits(242) 0.0 65/65(100%) 0/65(0%) Plus/Plus
Query      129  QAAGGLRGITASTVSGGSFVVRRGFSSXXXXXXXXXXXXXXPLALLSFSTSYAISGCSMLGIWAH  323
                QAAGGLRGITASTVSGGSFVVRRGFSSAVAVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAH
Subject   3589  QAAGGLRGITASTVSGGSFVVRRGFSSAVAVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAH  3783

Range 9: 3463 to 3513 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.8 bits(85) 0.0 17/17(100%) 0/17(0%) Plus/Plus
Query        3  LIGIFVASLGAAPVAWK  53
                LIGIFVASLGAAPVAWK
Subject   3463  LIGIFVASLGAAPVAWK  3513

Grapevine leafroll associated virus 3 isolate 623, complete genome

Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 8

Range 1: 3944 to 4264 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
267.7 bits(578) 0.0 105/107(98%) 0/107(0%) Plus/Plus
Query        2  AYWDFCGVFGCGPCCMEVQARNCGLRQKICGQ*LRNSKLIEFSSRWWFTRYNR*HSIRRVICCAKRVFVGCGRHQGDRS*TSSPLSAVIVFYLIRHFRLQYARHLGT  322
                AYWDFCGVFGCGPCC+EVQARNCG RQKICGQ*LRNSKLIEFSSRWWFTRYNR*HSIRRVICCAKRVFVGCGRHQGDRS*TSSPLSAVIVFYLIRHFRLQYARHLGT
Subject   3944  AYWDFCGVFGCGPCCLEVQARNCG*RQKICGQ*LRNSKLIEFSSRWWFTRYNR*HSIRRVICCAKRVFVGCGRHQGDRS*TSSPLSAVIVFYLIRHFRLQYARHLGT  4264

Range 2: 3943 to 4266 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
259.5 bits(560) 0.0 107/108(99%) 0/108(0%) Plus/Plus
Query        1  CLLGFLWRLWVRPLLHGSTGAELRLTPEDMRAVVTKL*AH*VLKPLVVYAV*PLAQYPAGHLLCEEGFRRLWPSPGRP*LNVKSP*RCYRFLPHTPFPAAVC*AFGHT  324
                CLLGFLWRLWVRPLL GSTGAELRLTPEDMRAVVTKL*AH*VLKPLVVYAV*PLAQYPAGHLLCEEGFRRLWPSPGRP*LNVKSP*RCYRFLPHTPFPAAVC*AFGHT
Subject   3943  CLLGFLWRLWVRPLLLGSTGAELRLTPEDMRAVVTKL*AH*VLKPLVVYAV*PLAQYPAGHLLCEEGFRRLWPSPGRP*LNVKSP*RCYRFLPHTPFPAAVC*AFGHT  4266

Range 3: 3943 to 4266 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
259.5 bits(560) 0.0 106/108(98%) 0/108(0%) Minus/Minus
Query        1  RVPKCLAYCSRKWRMR*KTITALRGLDV*LRSPW*RPQPTKTLFAQQMTRRILC*RLYRVNHQRLENSMSLEFRNYCPHIFWRKPQFRACTSMQQGPHPKTPQKSQ*A  324
                RVPKCLAYCSRKWRMR*KTITALRGLDV*LRSPW*RPQPTKTLFAQQMTRRILC*RLYRVNHQRLENSMSLEFRNYCPHIFWR PQFRACTS QQGPHPKTPQKSQ*A
Subject   3943  RVPKCLAYCSRKWRMR*KTITALRGLDV*LRSPW*RPQPTKTLFAQQMTRRILC*RLYRVNHQRLENSMSLEFRNYCPHIFWR*PQFRACTSKQQGPHPKTPQKSQ*A  4266

Range 4: 3945 to 4265 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
246.2 bits(531) 0.0 106/107(99%) 0/107(0%) Minus/Minus
Query        3  VCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPGDGHSRRKPSSHNK*PAGYCASGYTA*TTSGLRTQ*A*SFVTTARISSGVSRNSAPVLPCNRGRTQRRHKNPNK  323
                VCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPGDGHSRRKPSSHNK*PAGYCASGYTA*TTSGLRTQ*A*SFVTTARISSGVSRNSAPVLP NRGRTQRRHKNPNK
Subject   3945  VCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPGDGHSRRKPSSHNK*PAGYCASGYTA*TTSGLRTQ*A*SFVTTARISSGVSRNSAPVLPSNRGRTQRRHKNPNK  4265

Range 5: 3944 to 4150 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
126.2 bits(269) 0.0 67/69(97%) 0/69(0%) Minus/Minus
Query        2  DENPLRTTNDPPDTVLAVIPRKPPAA*ELNELRVSXXXXXXXXXXXAIPRLYFHATGAAPKDATKIPIS  208
                DENPLRTTNDPPDTVLAVIPRKPPAA*ELNELRVS*LLPAYLLA AAIPRLYF ATGAAPKDATKIPIS
Subject   3944  DENPLRTTNDPPDTVLAVIPRKPPAA*ELNELRVS*LLPAYLLALAAIPRLYFQATGAAPKDATKIPIS  4150

Range 6: 4193 to 4264 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
60.6 bits(126) 0.0 24/24(100%) 0/24(0%) Minus/Minus
Query      251  CAQMPSILQPEMAYEVENDNSAKG  322
                CAQMPSILQPEMAYEVENDNSAKG
Subject   4193  CAQMPSILQPEMAYEVENDNSAKG  4264

Range 7: 4071 to 4265 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
113.8 bits(242) 0.0 65/65(100%) 0/65(0%) Plus/Plus
Query      129  QAAGGLRGITASTVSGGSFVVRRGFSSXXXXXXXXXXXXXXPLALLSFSTSYAISGCSMLGIWAH  323
                QAAGGLRGITASTVSGGSFVVRRGFSSAVAVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAH
Subject   4071  QAAGGLRGITASTVSGGSFVVRRGFSSAVAVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAH  4265

Range 8: 3945 to 3995 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.8 bits(85) 0.0 17/17(100%) 0/17(0%) Plus/Plus
Query        3  LIGIFVASLGAAPVAWK  53
                LIGIFVASLGAAPVAWK
Subject   3945  LIGIFVASLGAAPVAWK  3995

Grapevine leafroll associated virus 3 isolate GP18, complete genome

Sequence ID: EU259806.1 Length: 18498 Number of Matches: 9

Range 1: 3944 to 4264 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
267.3 bits(577) 0.0 106/107(99%) 0/107(0%) Plus/Plus
Query        2  AYWDFCGVFGCGPCCMEVQARNCGLRQKICGQ*LRNSKLIEFSSRWWFTRYNR*HSIRRVICCAKRVFVGCGRHQGDRS*TSSPLSAVIVFYLIRHFRLQYARHLGT  322
                AYWDFCGVFGCGPCCMEVQARN GLRQKICGQ*LRNSKLIEFSSRWWFTRYNR*HSIRRVICCAKRVFVGCGRHQGDRS*TSSPLSAVIVFYLIRHFRLQYARHLGT
Subject   3944  AYWDFCGVFGCGPCCMEVQARNRGLRQKICGQ*LRNSKLIEFSSRWWFTRYNR*HSIRRVICCAKRVFVGCGRHQGDRS*TSSPLSAVIVFYLIRHFRLQYARHLGT  4264

Range 2: 3943 to 4266 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
264.5 bits(571) 0.0 107/108(99%) 0/108(0%) Minus/Minus
Query        1  RVPKCLAYCSRKWRMR*KTITALRGLDV*LRSPW*RPQPTKTLFAQQMTRRILC*RLYRVNHQRLENSMSLEFRNYCPHIFWRKPQFRACTSMQQGPHPKTPQKSQ*A  324
                RVPKCLAYCSRKWRMR*KTITALRGLDV*LRSPW*RPQPTKTLFAQQMTRRILC*RLYRVNHQRLENSMSLEFRNYCPHIFWRKP+FRACTSMQQGPHPKTPQKSQ*A
Subject   3943  RVPKCLAYCSRKWRMR*KTITALRGLDV*LRSPW*RPQPTKTLFAQQMTRRILC*RLYRVNHQRLENSMSLEFRNYCPHIFWRKPRFRACTSMQQGPHPKTPQKSQ*A  4266

Range 3: 3943 to 4266 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
261.8 bits(565) 0.0 107/108(99%) 0/108(0%) Plus/Plus
Query        1  CLLGFLWRLWVRPLLHGSTGAELRLTPEDMRAVVTKL*AH*VLKPLVVYAV*PLAQYPAGHLLCEEGFRRLWPSPGRP*LNVKSP*RCYRFLPHTPFPAAVC*AFGHT  324
                CLLGFLWRLWVRPLLHGSTGAE RLTPEDMRAVVTKL*AH*VLKPLVVYAV*PLAQYPAGHLLCEEGFRRLWPSPGRP*LNVKSP*RCYRFLPHTPFPAAVC*AFGHT
Subject   3943  CLLGFLWRLWVRPLLHGSTGAESRLTPEDMRAVVTKL*AH*VLKPLVVYAV*PLAQYPAGHLLCEEGFRRLWPSPGRP*LNVKSP*RCYRFLPHTPFPAAVC*AFGHT  4266

Range 4: 3945 to 4265 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
248.5 bits(536) 0.0 106/107(99%) 0/107(0%) Minus/Minus
Query        3  VCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPGDGHSRRKPSSHNK*PAGYCASGYTA*TTSGLRTQ*A*SFVTTARISSGVSRNSAPVLPCNRGRTQRRHKNPNK  323
                VCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPGDGHSRRKPSSHNK*PAGYCASGYTA*TTSGLRTQ*A*SFVTTARISSGVSR+SAPVLPCNRGRTQRRHKNPNK
Subject   3945  VCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPGDGHSRRKPSSHNK*PAGYCASGYTA*TTSGLRTQ*A*SFVTTARISSGVSRDSAPVLPCNRGRTQRRHKNPNK  4265

Range 5: 4046 to 4150 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.0 bits(177) 0.0 35/35(100%) 0/35(0%) Minus/Minus
Query      104  DENPLRTTNDPPDTVLAVIPRKPPAA*ELNELRVS  208
                DENPLRTTNDPPDTVLAVIPRKPPAA*ELNELRVS
Subject   4046  DENPLRTTNDPPDTVLAVIPRKPPAA*ELNELRVS  4150

Range 6: 4193 to 4264 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
60.6 bits(126) 0.0 24/24(100%) 0/24(0%) Minus/Minus
Query      251  CAQMPSILQPEMAYEVENDNSAKG  322
                CAQMPSILQPEMAYEVENDNSAKG
Subject   4193  CAQMPSILQPEMAYEVENDNSAKG  4264

Range 7: 3944 to 4009 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.6 bits(115) 0.0 22/22(100%) 0/22(0%) Minus/Minus
Query        2  IPRLYFHATGAAPKDATKIPIS  67
                IPRLYFHATGAAPKDATKIPIS
Subject   3944  IPRLYFHATGAAPKDATKIPIS  4009

Range 8: 4071 to 4265 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
113.8 bits(242) 0.0 65/65(100%) 0/65(0%) Plus/Plus
Query      129  QAAGGLRGITASTVSGGSFVVRRGFSSXXXXXXXXXXXXXXPLALLSFSTSYAISGCSMLGIWAH  323
                QAAGGLRGITASTVSGGSFVVRRGFSSAVAVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAH
Subject   4071  QAAGGLRGITASTVSGGSFVVRRGFSSAVAVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAH  4265

Range 9: 3945 to 3995 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.8 bits(85) 0.0 17/17(100%) 0/17(0%) Plus/Plus
Query        3  LIGIFVASLGAAPVAWK  53
                LIGIFVASLGAAPVAWK
Subject   3945  LIGIFVASLGAAPVAWK  3995

Grapevine leafroll associated virus 3 isolate TC BR, complete genome

Sequence ID: KX756668.1 Length: 18498 Number of Matches: 8

Range 1: 3944 to 4264 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
262.2 bits(566) 0.0 105/107(98%) 0/107(0%) Plus/Plus
Query        2  AYWDFCGVFGCGPCCMEVQARNCGLRQKICGQ*LRNSKLIEFSSRWWFTRYNR*HSIRRVICCAKRVFVGCGRHQGDRS*TSSPLSAVIVFYLIRHFRLQYARHLGT  322
                A WDFCGVFGCGPCCMEVQARNCGLRQKICGQ*LRNSKLIEFSSR WFTRYNR*HSIRRVICCAKRVFVGCGRHQGDRS*TSSPLSAVIVFYLIRHFRLQYARHLGT
Subject   3944  ASWDFCGVFGCGPCCMEVQARNCGLRQKICGQ*LRNSKLIEFSSRRWFTRYNR*HSIRRVICCAKRVFVGCGRHQGDRS*TSSPLSAVIVFYLIRHFRLQYARHLGT  4264

Range 2: 3949 to 4266 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
262.2 bits(566) 0.0 105/106(99%) 0/106(0%) Minus/Minus
Query        7  RVPKCLAYCSRKWRMR*KTITALRGLDV*LRSPW*RPQPTKTLFAQQMTRRILC*RLYRVNHQRLENSMSLEFRNYCPHIFWRKPQFRACTSMQQGPHPKTPQKSQ  324
                RVPKCLAYCSRKWRMR*KTITALRGLDV*LRSPW*RPQPTKTLFAQQMTRRILC*RLYRVNH+RLENSMSLEFRNYCPHIFWRKPQFRACTSMQQGPHPKTPQKSQ
Subject   3949  RVPKCLAYCSRKWRMR*KTITALRGLDV*LRSPW*RPQPTKTLFAQQMTRRILC*RLYRVNHRRLENSMSLEFRNYCPHIFWRKPQFRACTSMQQGPHPKTPQKSQ  4266

Range 3: 3943 to 4266 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
257.2 bits(555) 0.0 105/108(97%) 0/108(0%) Plus/Plus
Query        1  CLLGFLWRLWVRPLLHGSTGAELRLTPEDMRAVVTKL*AH*VLKPLVVYAV*PLAQYPAGHLLCEEGFRRLWPSPGRP*LNVKSP*RCYRFLPHTPFPAAVC*AFGHT  324
                C LGFLWRLWVRPLLHGSTGAELRLTPEDMRAVV KL*AH*VLKP VVYAV*PLAQYPAGHLLCEEGFRRLWPSPGRP*LNVKSP*RCYRFLPHTPFPAAVC*AFGHT
Subject   3943  CFLGFLWRLWVRPLLHGSTGAELRLTPEDMRAVVAKL*AH*VLKPPVVYAV*PLAQYPAGHLLCEEGFRRLWPSPGRP*LNVKSP*RCYRFLPHTPFPAAVC*AFGHT  4266

Range 4: 3945 to 4265 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
244.4 bits(527) 0.0 104/107(97%) 0/107(0%) Minus/Minus
Query        3  VCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPGDGHSRRKPSSHNK*PAGYCASGYTA*TTSGLRTQ*A*SFVTTARISSGVSRNSAPVLPCNRGRTQRRHKNPNK  323
                VCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPGDGHSRRKPSSHNK*PAGYCASGYTA*TT GLRTQ*A*SF TTARISSGVSRNSAPVLPCNRGRTQRRHKNP K
Subject   3945  VCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPGDGHSRRKPSSHNK*PAGYCASGYTA*TTGGLRTQ*A*SFATTARISSGVSRNSAPVLPCNRGRTQRRHKNPKK  4265

Range 5: 3944 to 4150 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
126.6 bits(270) 0.0 67/69(97%) 0/69(0%) Minus/Minus
Query        2  DENPLRTTNDPPDTVLAVIPRKPPAA*ELNELRVSXXXXXXXXXXXAIPRLYFHATGAAPKDATKIPIS  208
                DENPLRTTNDPPDTVLAVIPRKPPAA*ELNELRVS LLPAYLLA*AAIPRLYFHATGAAPKDATKIP S
Subject   3944  DENPLRTTNDPPDTVLAVIPRKPPAA*ELNELRVSQLLPAYLLA*AAIPRLYFHATGAAPKDATKIPRS  4150

Range 6: 4193 to 4264 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
60.6 bits(126) 0.0 24/24(100%) 0/24(0%) Minus/Minus
Query      251  CAQMPSILQPEMAYEVENDNSAKG  322
                CAQMPSILQPEMAYEVENDNSAKG
Subject   4193  CAQMPSILQPEMAYEVENDNSAKG  4264

Range 7: 4071 to 4265 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
113.8 bits(242) 0.0 65/65(100%) 0/65(0%) Plus/Plus
Query      129  QAAGGLRGITASTVSGGSFVVRRGFSSXXXXXXXXXXXXXXPLALLSFSTSYAISGCSMLGIWAH  323
                QAAGGLRGITASTVSGGSFVVRRGFSSAVAVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAH
Subject   4071  QAAGGLRGITASTVSGGSFVVRRGFSSAVAVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAH  4265

Range 8: 3945 to 3995 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.9 bits(83) 0.0 16/17(94%) 0/17(0%) Plus/Plus
Query        3  LIGIFVASLGAAPVAWK  53
                L+GIFVASLGAAPVAWK
Subject   3945  LLGIFVASLGAAPVAWK  3995

Nucleotide Sequence (449 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
45
90
135
180
225
270
315
360
405
449

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
314.9 1856.7 31% 3.765e-84 99% JX559645.1
314.9 1856.7 31% 3.765e-84 99% GQ352631.1
314.9 1856.7 31% 3.765e-84 99% GU983863.1
314.9 1856.7 31% 3.765e-84 99% EU344893.1
314.9 1846.1 31% 3.765e-84 99% KX756669.1

Alignments

Grapevine leafroll associated virus 3 isolate 3138 07, complete genome

Sequence ID: JX559645.1 Length: 18498 Number of Matches: 6

Range 1: 12746 to 13150 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
314.9 bits(681) 0.0 134/135(99%) 0/135(0%) Minus/Plus
Query        7  FR*GSMWT*RRI*KVRSCR*KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTLP  411
                FR*GSMWT*RRI*KVRSCR*KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRT P
Subject  12746  FR*GSMWT*RRI*KVRSCR*KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTHP  13150

Range 2: 12748 to 13149 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
314.0 bits(679) 0.0 133/134(99%) 0/134(0%) Plus/Minus
Query        8  GSVLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPYL  409
                G VLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPYL
Subject  12748  GCVLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPYL  13149

Range 3: 12744 to 13151 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
313.1 bits(677) 0.0 135/136(99%) 0/136(0%) Minus/Plus
Query        6  GSGREVCGRNAEFRKYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHSR  413
                GSGREVCGRNAEFRKYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGH+R
Subject  12744  GSGREVCGRNAEFRKYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTR  13151

Range 4: 12757 to 13155 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
309.9 bits(670) 0.0 133/133(100%) 0/133(0%) Minus/Plus
Query        2  KYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGG  400
                KYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGG
Subject  12757  KYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGG  13155

Range 5: 12756 to 13154 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
302.6 bits(654) 0.0 133/133(100%) 0/133(0%) Plus/Minus
Query        3  PPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYF  401
                PPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYF
Subject  12756  PPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYF  13154

Range 6: 12743 to 13150 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
302.1 bits(653) 0.0 135/136(99%) 0/136(0%) Plus/Minus
Query        7  RECPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYFLNSALRPHTSLPEP  414
                R CPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYFLNSALRPHTSLPEP
Subject  12743  RVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYFLNSALRPHTSLPEP  13150

Grapevine leafroll associated virus 3 isolate 621, complete genome

Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 6

Range 1: 12746 to 13150 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
314.9 bits(681) 0.0 134/135(99%) 0/135(0%) Minus/Plus
Query        7  FR*GSMWT*RRI*KVRSCR*KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTLP  411
                FR*GSMWT*RRI*KVRSCR*KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRT P
Subject  12746  FR*GSMWT*RRI*KVRSCR*KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTHP  13150

Range 2: 12748 to 13149 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
314.0 bits(679) 0.0 133/134(99%) 0/134(0%) Plus/Minus
Query        8  GSVLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPYL  409
                G VLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPYL
Subject  12748  GCVLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPYL  13149

Range 3: 12744 to 13151 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
313.1 bits(677) 0.0 135/136(99%) 0/136(0%) Minus/Plus
Query        6  GSGREVCGRNAEFRKYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHSR  413
                GSGREVCGRNAEFRKYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGH+R
Subject  12744  GSGREVCGRNAEFRKYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTR  13151

Range 4: 12757 to 13155 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
309.9 bits(670) 0.0 133/133(100%) 0/133(0%) Minus/Plus
Query        2  KYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGG  400
                KYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGG
Subject  12757  KYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGG  13155

Range 5: 12756 to 13154 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
302.6 bits(654) 0.0 133/133(100%) 0/133(0%) Plus/Minus
Query        3  PPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYF  401
                PPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYF
Subject  12756  PPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYF  13154

Range 6: 12743 to 13150 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
302.1 bits(653) 0.0 135/136(99%) 0/136(0%) Plus/Minus
Query        7  RECPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYFLNSALRPHTSLPEP  414
                R CPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYFLNSALRPHTSLPEP
Subject  12743  RVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYFLNSALRPHTSLPEP  13150

Grapevine leafroll associated virus 3 isolate WA MR, complete genome

Sequence ID: GU983863.1 Length: 18498 Number of Matches: 6

Range 1: 12746 to 13150 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
314.9 bits(681) 0.0 134/135(99%) 0/135(0%) Minus/Plus
Query        7  FR*GSMWT*RRI*KVRSCR*KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTLP  411
                FR*GSMWT*RRI*KVRSCR*KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRT P
Subject  12746  FR*GSMWT*RRI*KVRSCR*KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTHP  13150

Range 2: 12748 to 13149 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
314.0 bits(679) 0.0 133/134(99%) 0/134(0%) Plus/Minus
Query        8  GSVLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPYL  409
                G VLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPYL
Subject  12748  GCVLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPYL  13149

Range 3: 12744 to 13151 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
313.1 bits(677) 0.0 135/136(99%) 0/136(0%) Minus/Plus
Query        6  GSGREVCGRNAEFRKYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHSR  413
                GSGREVCGRNAEFRKYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGH+R
Subject  12744  GSGREVCGRNAEFRKYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTR  13151

Range 4: 12757 to 13155 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
309.9 bits(670) 0.0 133/133(100%) 0/133(0%) Minus/Plus
Query        2  KYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGG  400
                KYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGG
Subject  12757  KYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGG  13155

Range 5: 12756 to 13154 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
302.6 bits(654) 0.0 133/133(100%) 0/133(0%) Plus/Minus
Query        3  PPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYF  401
                PPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYF
Subject  12756  PPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYF  13154

Range 6: 12743 to 13150 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
302.1 bits(653) 0.0 135/136(99%) 0/136(0%) Plus/Minus
Query        7  RECPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYFLNSALRPHTSLPEP  414
                R CPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYFLNSALRPHTSLPEP
Subject  12743  RVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYFLNSALRPHTSLPEP  13150

Grapevine leafroll associated virus 3 isolate Cl 766, complete genome

Sequence ID: EU344893.1 Length: 17919 Number of Matches: 6

Range 1: 12167 to 12571 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
314.9 bits(681) 0.0 134/135(99%) 0/135(0%) Minus/Plus
Query        7  FR*GSMWT*RRI*KVRSCR*KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTLP  411
                FR*GSMWT*RRI*KVRSCR*KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRT P
Subject  12167  FR*GSMWT*RRI*KVRSCR*KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTHP  12571

Range 2: 12169 to 12570 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
314.0 bits(679) 0.0 133/134(99%) 0/134(0%) Plus/Minus
Query        8  GSVLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPYL  409
                G VLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPYL
Subject  12169  GCVLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPYL  12570

Range 3: 12165 to 12572 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
313.1 bits(677) 0.0 135/136(99%) 0/136(0%) Minus/Plus
Query        6  GSGREVCGRNAEFRKYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHSR  413
                GSGREVCGRNAEFRKYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGH+R
Subject  12165  GSGREVCGRNAEFRKYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTR  12572

Range 4: 12178 to 12576 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
309.9 bits(670) 0.0 133/133(100%) 0/133(0%) Minus/Plus
Query        2  KYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGG  400
                KYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGG
Subject  12178  KYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGG  12576

Range 5: 12177 to 12575 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
302.6 bits(654) 0.0 133/133(100%) 0/133(0%) Plus/Minus
Query        3  PPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYF  401
                PPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYF
Subject  12177  PPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYF  12575

Range 6: 12164 to 12571 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
302.1 bits(653) 0.0 135/136(99%) 0/136(0%) Plus/Minus
Query        7  RECPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYFLNSALRPHTSLPEP  414
                R CPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYFLNSALRPHTSLPEP
Subject  12164  RVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYFLNSALRPHTSLPEP  12571

Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome

Sequence ID: KX756669.1 Length: 18313 Number of Matches: 6

Range 1: 12561 to 12965 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
314.9 bits(681) 0.0 134/135(99%) 0/135(0%) Minus/Plus
Query        7  FR*GSMWT*RRI*KVRSCR*KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTLP  411
                FR*GSMWT*RRI*KVRSCR*KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRT P
Subject  12561  FR*GSMWT*RRI*KVRSCR*KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTHP  12965

Range 2: 12563 to 12964 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
314.0 bits(679) 0.0 133/134(99%) 0/134(0%) Plus/Minus
Query        8  GSVLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPYL  409
                G VLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPYL
Subject  12563  GCVLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPYL  12964

Range 3: 12559 to 12966 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
311.3 bits(673) 0.0 134/136(99%) 0/136(0%) Minus/Plus
Query        6  GSGREVCGRNAEFRKYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHSR  413
                GSGREVCGRNAEFRK+DRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGH+R
Subject  12559  GSGREVCGRNAEFRKFDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTR  12966

Range 4: 12572 to 12970 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
308.1 bits(666) 0.0 132/133(99%) 0/133(0%) Minus/Plus
Query        2  KYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGG  400
                KYVDVTQNLES+IVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGG
Subject  12572  KYVDVTQNLESSIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGG  12970

Range 5: 12571 to 12969 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
299.8 bits(648) 0.0 132/133(99%) 0/133(0%) Plus/Minus
Query        3  PPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYF  401
                PPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTI LSKFCVTSTYF
Subject  12571  PPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIELSKFCVTSTYF  12969

Range 6: 12558 to 12965 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
298.0 bits(644) 0.0 134/136(99%) 0/136(0%) Plus/Minus
Query        7  RECPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYFLNSALRPHTSLPEP  414
                R CPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARS FLNSALRPHTSLPEP
Subject  12558  RVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSNFLNSALRPHTSLPEP  12965

Nucleotide Sequence (231 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
24
48
72
96
120
144
168
192
216
231

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
193.5 1028.7 34% 3.595e-48 99% GQ352632.1
193.5 1028.7 34% 3.595e-48 99% KX756668.1
191.7 1011.3 34% 1.281e-47 97% KX701860.1
191.2 1019.5 34% 1.759e-47 97% EU259806.1
190.8 1014.0 34% 2.417e-47 97% KJ174518.1

Alignments

Grapevine leafroll associated virus 3 isolate 623, complete genome

Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 6

Range 1: 1638 to 1868 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
193.5 bits(416) 0.0 76/77(99%) 0/77(0%) Plus/Plus
Query        1  RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSIGFLMYLGFRSLKAIRFAGTNILHIPSLNEERTFGWKGGDVYLP  231
                RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSIGFLM+LGFRSLKAIRFAGTNILHIPSLNEERTFGWKGGDVYLP
Subject   1638  RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSIGFLMHLGFRSLKAIRFAGTNILHIPSLNEERTFGWKGGDVYLP  1868

Range 2: 1639 to 1866 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
183.4 bits(394) 0.0 75/76(99%) 0/76(0%) Minus/Minus
Query        2  GDRRLRPSTQRYALH*VMVCVVCSCPQT*WPLTI*SQGTSRNLSKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP  229
                GDRRLRPSTQRYALH*VMVCVVCSCPQT*WPLTI*SQG SRNLSKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP
Subject   1639  GDRRLRPSTQRYALH*VMVCVVCSCPQT*WPLTI*SQGASRNLSKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP  1866

Range 3: 1638 to 1868 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
183.0 bits(393) 0.0 77/77(100%) 0/77(0%) Minus/Minus
Query        1  GEIDVSALPPKGTLFIE*WYV*YVRARKPNGL*RSKAKVHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP  231
                GEIDVSALPPKGTLFIE*WYV*YVRARKPNGL*RSKAKVHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP
Subject   1638  GEIDVSALPPKGTLFIE*WYV*YVRARKPNGL*RSKAKVHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP  1868

Range 4: 1639 to 1866 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
174.3 bits(374) 0.0 76/76(100%) 0/76(0%) Plus/Plus
Query        2  GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CTLALDR*RPLGLRARTYYTYHHSMKSVPLGGRAETSIS  229
                GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CTLALDR*RPLGLRARTYYTYHHSMKSVPLGGRAETSIS
Subject   1639  GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CTLALDR*RPLGLRARTYYTYHHSMKSVPLGGRAETSIS  1866

Range 5: 1640 to 1867 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
149.5 bits(320) 0.0 75/76(99%) 0/76(0%) Minus/Minus
Query        3  GR*TSPPFHPKVRSSLSDGMCSMFVPANLMAFNDLKPRYIKKPIEKEDEKQRRXXXXXXXXXXLNQHHPLVVLTNA  230
                GR*TSPPFHPKVRSSLSDGMCSMFVPANLMAFNDLKPR IKKPIEKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNA
Subject   1640  GR*TSPPFHPKVRSSLSDGMCSMFVPANLMAFNDLKPRCIKKPIEKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNA  1867

Range 6: 1640 to 1867 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.9 bits(310) 0.0 75/76(99%) 0/76(0%) Plus/Plus
Query        3  GVREHYQRVVLV*Q*EAEGRNLQTSXXXXXXXXXXXXVPWL*IVKGH*VCGHEHTTHTITQ*RAYLWVEGRRRLSP  230
                GVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLFDRFLD PWL*IVKGH*VCGHEHTTHTITQ*RAYLWVEGRRRLSP
Subject   1640  GVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLFDRFLDAPWL*IVKGH*VCGHEHTTHTITQ*RAYLWVEGRRRLSP  1867

Grapevine leafroll associated virus 3 isolate TC BR, complete genome

Sequence ID: KX756668.1 Length: 18498 Number of Matches: 6

Range 1: 1638 to 1868 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
193.5 bits(416) 0.0 76/77(99%) 0/77(0%) Plus/Plus
Query        1  RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSIGFLMYLGFRSLKAIRFAGTNILHIPSLNEERTFGWKGGDVYLP  231
                RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSIGFLM+LGFRSLKAIRFAGTNILHIPSLNEERTFGWKGGDVYLP
Subject   1638  RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSIGFLMHLGFRSLKAIRFAGTNILHIPSLNEERTFGWKGGDVYLP  1868

Range 2: 1639 to 1866 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
183.4 bits(394) 0.0 75/76(99%) 0/76(0%) Minus/Minus
Query        2  GDRRLRPSTQRYALH*VMVCVVCSCPQT*WPLTI*SQGTSRNLSKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP  229
                GDRRLRPSTQRYALH*VMVCVVCSCPQT*WPLTI*SQG SRNLSKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP
Subject   1639  GDRRLRPSTQRYALH*VMVCVVCSCPQT*WPLTI*SQGASRNLSKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP  1866

Range 3: 1638 to 1868 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
183.0 bits(393) 0.0 77/77(100%) 0/77(0%) Minus/Minus
Query        1  GEIDVSALPPKGTLFIE*WYV*YVRARKPNGL*RSKAKVHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP  231
                GEIDVSALPPKGTLFIE*WYV*YVRARKPNGL*RSKAKVHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP
Subject   1638  GEIDVSALPPKGTLFIE*WYV*YVRARKPNGL*RSKAKVHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP  1868

Range 4: 1639 to 1866 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
174.3 bits(374) 0.0 76/76(100%) 0/76(0%) Plus/Plus
Query        2  GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CTLALDR*RPLGLRARTYYTYHHSMKSVPLGGRAETSIS  229
                GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CTLALDR*RPLGLRARTYYTYHHSMKSVPLGGRAETSIS
Subject   1639  GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CTLALDR*RPLGLRARTYYTYHHSMKSVPLGGRAETSIS  1866

Range 5: 1640 to 1867 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
149.5 bits(320) 0.0 75/76(99%) 0/76(0%) Minus/Minus
Query        3  GR*TSPPFHPKVRSSLSDGMCSMFVPANLMAFNDLKPRYIKKPIEKEDEKQRRXXXXXXXXXXLNQHHPLVVLTNA  230
                GR*TSPPFHPKVRSSLSDGMCSMFVPANLMAFNDLKPR IKKPIEKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNA
Subject   1640  GR*TSPPFHPKVRSSLSDGMCSMFVPANLMAFNDLKPRCIKKPIEKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNA  1867

Range 6: 1640 to 1867 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.9 bits(310) 0.0 75/76(99%) 0/76(0%) Plus/Plus
Query        3  GVREHYQRVVLV*Q*EAEGRNLQTSXXXXXXXXXXXXVPWL*IVKGH*VCGHEHTTHTITQ*RAYLWVEGRRRLSP  230
                GVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLFDRFLD PWL*IVKGH*VCGHEHTTHTITQ*RAYLWVEGRRRLSP
Subject   1640  GVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLFDRFLDAPWL*IVKGH*VCGHEHTTHTITQ*RAYLWVEGRRRLSP  1867

Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome

Sequence ID: KX701860.1 Length: 18020 Number of Matches: 6

Range 1: 1156 to 1386 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
191.7 bits(412) 0.0 75/77(97%) 0/77(0%) Plus/Plus
Query        1  RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSIGFLMYLGFRSLKAIRFAGTNILHIPSLNEERTFGWKGGDVYLP  231
                RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSIGFLM+LGFRSLK IRFAGTNILHIPSLNEERTFGWKGGDVYLP
Subject   1156  RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSIGFLMHLGFRSLKVIRFAGTNILHIPSLNEERTFGWKGGDVYLP  1386

Range 2: 1156 to 1386 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
179.8 bits(386) 0.0 76/77(99%) 0/77(0%) Minus/Minus
Query        1  GEIDVSALPPKGTLFIE*WYV*YVRARKPNGL*RSKAKVHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP  231
                GEIDVSALPPKGTLFIE*WYV*YVRARKPN L*RSKAKVHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP
Subject   1156  GEIDVSALPPKGTLFIE*WYV*YVRARKPNDL*RSKAKVHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP  1386

Range 3: 1157 to 1384 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
176.6 bits(379) 0.0 74/76(97%) 0/76(0%) Minus/Minus
Query        2  GDRRLRPSTQRYALH*VMVCVVCSCPQT*WPLTI*SQGTSRNLSKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP  229
                GDRRLRPSTQRYALH*VMVCVVCSCPQT* PLTI*SQG SRNLSKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP
Subject   1157  GDRRLRPSTQRYALH*VMVCVVCSCPQT**PLTI*SQGASRNLSKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP  1384

Range 4: 1157 to 1384 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
170.6 bits(366) 0.0 75/76(99%) 0/76(0%) Plus/Plus
Query        2  GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CTLALDR*RPLGLRARTYYTYHHSMKSVPLGGRAETSIS  229
                GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CTLALDR*R LGLRARTYYTYHHSMKSVPLGGRAETSIS
Subject   1157  GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CTLALDR*RSLGLRARTYYTYHHSMKSVPLGGRAETSIS  1384

Range 5: 1158 to 1385 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
147.7 bits(316) 0.0 74/76(97%) 0/76(0%) Minus/Minus
Query        3  GR*TSPPFHPKVRSSLSDGMCSMFVPANLMAFNDLKPRYIKKPIEKEDEKQRRXXXXXXXXXXLNQHHPLVVLTNA  230
                GR*TSPPFHPKVRSSLSDGMCSMFVPANLM FNDLKPR IKKPIEKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNA
Subject   1158  GR*TSPPFHPKVRSSLSDGMCSMFVPANLMTFNDLKPRCIKKPIEKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNA  1385

Range 6: 1158 to 1385 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.9 bits(310) 0.0 75/76(99%) 0/76(0%) Plus/Plus
Query        3  GVREHYQRVVLV*Q*EAEGRNLQTSXXXXXXXXXXXXVPWL*IVKGH*VCGHEHTTHTITQ*RAYLWVEGRRRLSP  230
                GVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLFDRFLD PWL*IVKGH*VCGHEHTTHTITQ*RAYLWVEGRRRLSP
Subject   1158  GVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLFDRFLDAPWL*IVKGH*VCGHEHTTHTITQ*RAYLWVEGRRRLSP  1385

Grapevine leafroll associated virus 3 isolate GP18, complete genome

Sequence ID: EU259806.1 Length: 18498 Number of Matches: 6

Range 1: 1638 to 1868 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
191.2 bits(411) 0.0 75/77(97%) 0/77(0%) Plus/Plus
Query        1  RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSIGFLMYLGFRSLKAIRFAGTNILHIPSLNEERTFGWKGGDVYLP  231
                RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSIGFLM+LGFRSLKAIRFAGT+ILHIPSLNEERTFGWKGGDVYLP
Subject   1638  RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSIGFLMHLGFRSLKAIRFAGTSILHIPSLNEERTFGWKGGDVYLP  1868

Range 2: 1639 to 1866 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
183.4 bits(394) 0.0 75/76(99%) 0/76(0%) Minus/Minus
Query        2  GDRRLRPSTQRYALH*VMVCVVCSCPQT*WPLTI*SQGTSRNLSKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP  229
                GDRRLRPSTQRYALH*VMVCVVCSCPQT*WPLTI*SQG SRNLSKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP
Subject   1639  GDRRLRPSTQRYALH*VMVCVVCSCPQT*WPLTI*SQGASRNLSKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP  1866

Range 3: 1638 to 1868 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
181.1 bits(389) 0.0 76/77(99%) 0/77(0%) Minus/Minus
Query        1  GEIDVSALPPKGTLFIE*WYV*YVRARKPNGL*RSKAKVHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP  231
                GEIDVSALPPKGTLFIE*WYV*Y RARKPNGL*RSKAKVHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP
Subject   1638  GEIDVSALPPKGTLFIE*WYV*YARARKPNGL*RSKAKVHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP  1868

Range 4: 1639 to 1866 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
172.0 bits(369) 0.0 75/76(99%) 0/76(0%) Plus/Plus
Query        2  GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CTLALDR*RPLGLRARTYYTYHHSMKSVPLGGRAETSIS  229
                GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CTLALDR*RPLGLRAR YYTYHHSMKSVPLGGRAETSIS
Subject   1639  GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CTLALDR*RPLGLRARAYYTYHHSMKSVPLGGRAETSIS  1866

Range 5: 1640 to 1867 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
146.8 bits(314) 0.0 74/76(97%) 0/76(0%) Minus/Minus
Query        3  GR*TSPPFHPKVRSSLSDGMCSMFVPANLMAFNDLKPRYIKKPIEKEDEKQRRXXXXXXXXXXLNQHHPLVVLTNA  230
                GR*TSPPFHPKVRSSLSDGMCSM VPANLMAFNDLKPR IKKPIEKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNA
Subject   1640  GR*TSPPFHPKVRSSLSDGMCSMLVPANLMAFNDLKPRCIKKPIEKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNA  1867

Range 6: 1640 to 1867 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.9 bits(310) 0.0 75/76(99%) 0/76(0%) Plus/Plus
Query        3  GVREHYQRVVLV*Q*EAEGRNLQTSXXXXXXXXXXXXVPWL*IVKGH*VCGHEHTTHTITQ*RAYLWVEGRRRLSP  230
                GVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLFDRFLD PWL*IVKGH*VCGHEHTTHTITQ*RAYLWVEGRRRLSP
Subject   1640  GVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLFDRFLDAPWL*IVKGH*VCGHEHTTHTITQ*RAYLWVEGRRRLSP  1867

Grapevine leafroll associated virus 3, complete genome

Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 6

Range 1: 1638 to 1868 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
190.8 bits(410) 0.0 75/77(97%) 0/77(0%) Plus/Plus
Query        1  RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSIGFLMYLGFRSLKAIRFAGTNILHIPSLNEERTFGWKGGDVYLP  231
                RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSIGFLM+LGFRSLKAIRFAGTNILHIPSLNEERTFGWK GDVYLP
Subject   1638  RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSIGFLMHLGFRSLKAIRFAGTNILHIPSLNEERTFGWKSGDVYLP  1868

Range 2: 1638 to 1868 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
183.0 bits(393) 0.0 77/77(100%) 0/77(0%) Minus/Minus
Query        1  GEIDVSALPPKGTLFIE*WYV*YVRARKPNGL*RSKAKVHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP  231
                GEIDVSALPPKGTLFIE*WYV*YVRARKPNGL*RSKAKVHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP
Subject   1638  GEIDVSALPPKGTLFIE*WYV*YVRARKPNGL*RSKAKVHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP  1868

Range 3: 1639 to 1866 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
179.8 bits(386) 0.0 74/76(97%) 0/76(0%) Minus/Minus
Query        2  GDRRLRPSTQRYALH*VMVCVVCSCPQT*WPLTI*SQGTSRNLSKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP  229
                GDRRLR STQRYALH*VMVCVVCSCPQT*WPLTI*SQG SRNLSKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP
Subject   1639  GDRRLRSSTQRYALH*VMVCVVCSCPQT*WPLTI*SQGASRNLSKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP  1866

Range 4: 1639 to 1866 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
174.3 bits(374) 0.0 76/76(100%) 0/76(0%) Plus/Plus
Query        2  GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CTLALDR*RPLGLRARTYYTYHHSMKSVPLGGRAETSIS  229
                GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CTLALDR*RPLGLRARTYYTYHHSMKSVPLGGRAETSIS
Subject   1639  GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CTLALDR*RPLGLRARTYYTYHHSMKSVPLGGRAETSIS  1866

Range 5: 1640 to 1867 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.9 bits(310) 0.0 74/76(97%) 0/76(0%) Minus/Minus
Query        3  GR*TSPPFHPKVRSSLSDGMCSMFVPANLMAFNDLKPRYIKKPIEKEDEKQRRXXXXXXXXXXLNQHHPLVVLTNA  230
                GR*TSP FHPKVRSSLSDGMCSMFVPANLMAFNDLKPR IKKPIEKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNA
Subject   1640  GR*TSPLFHPKVRSSLSDGMCSMFVPANLMAFNDLKPRCIKKPIEKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNA  1867

Range 6: 1640 to 1867 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
141.3 bits(302) 0.0 74/76(97%) 0/76(0%) Plus/Plus
Query        3  GVREHYQRVVLV*Q*EAEGRNLQTSXXXXXXXXXXXXVPWL*IVKGH*VCGHEHTTHTITQ*RAYLWVEGRRRLSP  230
                GVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLFDRFLD PWL*IVKGH*VCGHEHTTHTITQ*RAYLWVE RRRLSP
Subject   1640  GVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLFDRFLDAPWL*IVKGH*VCGHEHTTHTITQ*RAYLWVEERRRLSP  1867

Nucleotide Sequence (627 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
63
126
189
252
315
378
441
504
567
627

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
430.5 1121.8 29% 1.002e-118 35% JQ423939.1
429.6 1141.9 29% 1.884e-118 35% GQ352633.1
422.3 1110.0 40% 2.956e-116 37% KJ174518.1
421.4 1135.2 33% 5.562e-116 38% GQ352632.1
477.6 2604.0 26% 6.56e-133 97% KM058745.1

Alignments

Grapevine leafroll associated virus 3 isolate LN, complete genome

Sequence ID: JQ423939.1 Length: 18563 Number of Matches: 9

Range 1: 11621 to 12247 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
430.5 bits(938) 0.0 177/209(85%) 0/209(0%) Plus/Plus
Query        1  SIECVWRWSTGLENFYPDPVVAVMTGGSSALSKVREDVANLPQVSKVIFDSSDFRCSVACGAKVYCDILSGSSNLRLVDTLTNTLTDEVSDFQPVVIFPKGSPIPCSYTHRYNVSGDEVVYGIFEGENNRAFLNEPTFRGMSKRRGEPKEMDIAVFKLSTDGTVSVIVNGEEVVNEYLVPGTTNILESLVYRSGREEVEAKAIPEYLKT  627
                S   V  + TGL+NFYPDPV+AVMTGGSSAL KVR DVANLPQ+SKV+FDS+DFRCSVACGAKVYCDIL+G+S LRLVDTLTNTLTDEV+DFQPVVIFPKGSPIPCSYTHRY VSGDEVVYGIFEGENNRAFLNEPTFRG+SKRRGEPKE D+A F LSTDGTVSVIVNGEEV N+YLVPGTTN+L+SLVY+SGRE++EAKAIPEYL T
Subject  11621  SARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSADFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVTDFQPVVIFPKGSPIPCSYTHRYTVSGDEVVYGIFEGENNRAFLNEPTFRGVSKRRGEPKESDVAQFNLSTDGTVSVIVNGEEVKNQYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTT  12247

Range 2: 12001 to 12246 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
137.2 bits(293) 0.0 61/82(74%) 0/82(0%) Minus/Minus
Query      381  VFRYSGIAFASTSSLPDL*TKDSNMLVVPGTRYSFTTSSPLTITLTVPSVDNLNTAISISFGSPLRLDIPRNVGSFRKALLF  626
                V +YSGIA AS SSLPDL T +S+  VVPGTRY F TSSPLT+T TVPSV+ LN A S+SFGSPLR D PRNVGSFRKALLF
Subject  12001  VVKYSGIALASKSSLPDLYTNESSTFVVPGTRY*FFTSSPLTMTDTVPSVERLNCATSLSFGSPLRFDTPRNVGSFRKALLF  12246

Range 3: 11632 to 11832 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.9 bits(216) 0.0 45/67(67%) 0/67(0%) Minus/Minus
Query       12  PESMSQYTFAPQATEHRKSELSNITFDTCGKFATSSLTFDSALEPPVMTATTGSG*KFSKPVLHRQT  212
                P  MSQ T APQATEH KS LSN T D CGK ATS LT   AL+PPV+TA TGSG*K S+PVL+  T
Subject  11632  PAKMSQ*TLAPQATEHLKSALSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTST  11832

Range 4: 11890 to 11946 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.4 bits(84) 0.0 17/19(89%) 0/19(0%) Minus/Minus
Query      270  VYEHGIGLPLGKITTG*KS  326
                VYE GIGLP GKITTG*KS
Subject  11890  VYEQGIGLPFGKITTG*KS  11946

Range 5: 11651 to 12247 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
168.8 bits(362) 0.0 84/199(42%) 0/199(0%) Minus/Minus
Query       31  CL*VLRYCFRFYFFPTRSVD*RF*YVSRPWH*ILVHDFLSVDDHTYRPICR*LKHCDIHLLRLTSTFGHTPERRFIQKGSVVLAFKDAVDDFIPTHVVPVSVRTRYRTTFGKNHHRLKIRHFIS*SVS*CVH*AQIATTGKYVAIYLRPTGH*TPKIRTIEYNL*HLWQIRYVLSYFR*RARTPRHDGHHRIWIKIFQT  627
                C  VLRYC     F    +  R *+V  P + IL+   L+++D  YR +   +K   I     + TF + PE RFI K S++L FK  +  FI  H VP+SV   Y T F +NHHRLKIRHF+ * V * VH +Q   T + VA+ L  TGH*T KI TI++N  +L QI ++ S   *    P H+G++R+WIK+ +T
Subject  11651  CGQVLRYCLSLQIFSPGFIHQRI*HVCCPGYQILILYLLTINDDRYRTVRGKIKLRHIAFFWFSPTFRYAPECRFI*KSSIILPFKYTIYHFITAHRVPMSV*AGYWTAFRENHHRLKIRHFVR*RVR*SVHQSQSTITRQNVAVNLSSTGH*TSKIGTIKHNFRYLRQISHITSDLN*ST*PPSHNGNNRVWIKVIET  12247

Range 6: 11740 to 12054 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.9 bits(179) 0.0 48/105(46%) 0/105(0%) Plus/Plus
Query      120  FATSVKGYIR*FGFSVFSGLWGEGILRHTFR**QSAPSGHTN*HSN**SV*FSAGGDFSQR*SDTVFVHSQVQREWG*SRLRHL*RREQQSLSE*TDVPGYVQT*  434
                FA  +   + *  F +FSGLW  G+LRH   ** +   GH N H+N  S  FS GGDF +R S+T+ +HS V  E  *S + ++*R E  S S+*TD+PG ++T*
Subject  11740  FAADI*SCV**CRF*MFSGLWS*GLLRHFGG**WTETGGHFNEHANGRSDGFSTGGDFPERQSNTLLIHS*VHGER**SGIWYI*RGE**SFSK*TDIPGRIET*  12054

Range 7: 12109 to 12237 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.5 bits(45) 0.0 15/43(35%) 0/43(0%) Plus/Plus
Query      489  GKCDRQRRGSRERVSSARDD*HIRIFSLQIW*GRSRSESNTGV  617
                G C R   G +E +S  RD+   R   + I   R     NTGV
Subject  12109  GICHR*W*GGKESISGTRDNKRARFVGV*IRERRFGG*GNTGV  12237

Range 8: 11766 to 12053 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
81.3 bits(171) 0.0 46/96(48%) 0/96(0%) Minus/Minus
Query      146  YVWTYPGTSVHSEXXXXXXXXXXXXXLHPHSRCTCECTNTVSDYLWEKSPPAENQTLHQLEC*LVCPLGADCYYRKVCRNIPSPHRPLNTENPNYR  433
                YV   PG SVH E+L  S LQ     LH  S CT EC + V D L  KSPP EN +L  L C L CP  +  YY   CR+ P  HRPLN  N +Y+
Subject  11766  YVSIRPGMSVHLEKLYYSPLQIYHIPLHHRSPCTYECMSRVLDCLSGKSPPVENPSLRPLACSLKCPPVSVHYYPPKCRSKP*LHRPLNI*NRHYQ  12053

Range 9: 11739 to 11921 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.4 bits(108) 0.0 28/61(46%) 0/61(0%) Plus/Plus
Query      119  ICHKCQRLYSIVRIFGVQWPVGRRYIATYFPVVAICA*WTH*LTL*LMKCLIFSRW*FFPK  301
                IC +  +L  IV I  VQWPV  R+ AT++ V+     WT * T *  K  IF+RW*F  K
Subject  11739  ICRRYLKLCLIVPILDVQWPVELRFTATFWRVIVD*DWWTL*RTR*RTK*RIFNRW*FSRK  11921

Grapevine leafroll associated virus 3 isolate PL 20, complete genome

Sequence ID: GQ352633.1 Length: 18433 Number of Matches: 9

Range 1: 11491 to 12117 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
429.6 bits(936) 0.0 177/209(85%) 0/209(0%) Plus/Plus
Query        1  SIECVWRWSTGLENFYPDPVVAVMTGGSSALSKVREDVANLPQVSKVIFDSSDFRCSVACGAKVYCDILSGSSNLRLVDTLTNTLTDEVSDFQPVVIFPKGSPIPCSYTHRYNVSGDEVVYGIFEGENNRAFLNEPTFRGMSKRRGEPKEMDIAVFKLSTDGTVSVIVNGEEVVNEYLVPGTTNILESLVYRSGREEVEAKAIPEYLKT  627
                S   V  + TGL+NFYPDPV+AVMTGGSSAL KVR DVANLPQ+SKV+FDS+DFRCSVACGAKVYCDIL+G+S LRLVDTLTNTLTDEV DFQPVVIFPKGSPIPCSYTHRY VSGDEVVYGIFEGENNRAFLNEPTFRG+SKRRGEPKE D+A F LSTDGTVSVIVNGEEV N+YLVPGTTN+L+SLVY+SGRE++EAKAIPEYL T
Subject  11491  SARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSADFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVMDFQPVVIFPKGSPIPCSYTHRYTVSGDEVVYGIFEGENNRAFLNEPTFRGVSKRRGEPKESDVAQFNLSTDGTVSVIVNGEEVKNQYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTT  12117

Range 2: 11871 to 12116 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
137.2 bits(293) 0.0 61/82(74%) 0/82(0%) Minus/Minus
Query      381  VFRYSGIAFASTSSLPDL*TKDSNMLVVPGTRYSFTTSSPLTITLTVPSVDNLNTAISISFGSPLRLDIPRNVGSFRKALLF  626
                V +YSGIA AS SSLPDL T +S+  VVPGTRY F TSSPLT+T TVPSV+ LN A S+SFGSPLR D PRNVGSFRKALLF
Subject  11871  VVKYSGIALASKSSLPDLYTNESSTFVVPGTRY*FFTSSPLTMTDTVPSVERLNCATSLSFGSPLRFDTPRNVGSFRKALLF  12116

Range 3: 11502 to 11702 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.9 bits(216) 0.0 45/67(67%) 0/67(0%) Minus/Minus
Query       12  PESMSQYTFAPQATEHRKSELSNITFDTCGKFATSSLTFDSALEPPVMTATTGSG*KFSKPVLHRQT  212
                P  MSQ T APQATEH KS LSN T D CGK ATS LT   AL+PPV+TA TGSG*K S+PVL+  T
Subject  11502  PAKMSQ*TLAPQATEHLKSALSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTST  11702

Range 4: 11760 to 11816 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.4 bits(84) 0.0 17/19(89%) 0/19(0%) Minus/Minus
Query      270  VYEHGIGLPLGKITTG*KS  326
                VYE GIGLP GKITTG*KS
Subject  11760  VYEQGIGLPFGKITTG*KS  11816

Range 5: 11521 to 12117 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
172.0 bits(369) 0.0 85/199(43%) 0/199(0%) Minus/Minus
Query       31  CL*VLRYCFRFYFFPTRSVD*RF*YVSRPWH*ILVHDFLSVDDHTYRPICR*LKHCDIHLLRLTSTFGHTPERRFIQKGSVVLAFKDAVDDFIPTHVVPVSVRTRYRTTFGKNHHRLKIRHFIS*SVS*CVH*AQIATTGKYVAIYLRPTGH*TPKIRTIEYNL*HLWQIRYVLSYFR*RARTPRHDGHHRIWIKIFQT  627
                C  VLRYC     F    +  R *+V  P + IL+   L+++D  YR +   +K   I     + TF + PE RFI K S++L FK  +  FI  H VP+SV   Y T F +NHHRLKI HF+ * V * VH +Q   T + VA+ L  TGH*TPKI TIE+N  +L QI ++ S   *    P H+G++R+WIK+ +T
Subject  11521  CGQVLRYCLSLQIFSPGFIHQRI*HVCCPGYQILILYLLTINDDRYRTVRGKIKLRHIAFFWFSPTFRYAPECRFI*KSSIILPFKYTIYHFITAHRVPMSV*AGYWTAFRENHHRLKIHHFVR*RVR*SVHQSQSTITRQNVAVNLSSTGH*TPKIGTIEHNFRYLRQISHITSDLN*ST*PPSHNGNNRVWIKVIET  12117

Range 6: 11610 to 11924 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.9 bits(192) 0.0 50/105(48%) 0/105(0%) Plus/Plus
Query      120  FATSVKGYIR*FGFSVFSGLWGEGILRHTFR**QSAPSGHTN*HSN**SV*FSAGGDFSQR*SDTVFVHSQVQREWG*SRLRHL*RREQQSLSE*TDVPGYVQT*  434
                FA ++   +R*  F VFSGLW  G+LRH   ** +   GH N H+N  S  FS GGDF +R S+T+ +HS V  E  *S + ++*R E  S S+*TD+PG ++T*
Subject  11610  FAANI*SCVR*CRF*VFSGLWS*GLLRHFGG**WTETGGHFNEHANGRSDGFSTGGDFPERQSNTLLIHS*VHGER**SGIWYI*RGE**SFSK*TDIPGRIET*  11924

Range 7: 11979 to 12107 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.5 bits(45) 0.0 15/43(35%) 0/43(0%) Plus/Plus
Query      489  GKCDRQRRGSRERVSSARDD*HIRIFSLQIW*GRSRSESNTGV  617
                G C R   G +E +S  RD+   R   + I   R     NTGV
Subject  11979  GICHR*W*GGKESISGTRDNKRARFVGV*IRERRFGG*GNTGV  12107

Range 8: 11636 to 11923 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
85.8 bits(181) 0.0 48/96(50%) 0/96(0%) Minus/Minus
Query      146  YVWTYPGTSVHSEXXXXXXXXXXXXXLHPHSRCTCECTNTVSDYLWEKSPPAENQTLHQLEC*LVCPLGADCYYRKVCRNIPSPHRPLNTENPNYR  433
                YV   PG SVH E+L  S LQ     LH  S CT EC + V D L  KSPP EN +L  L C L CP  +  YY   CR+ P  HRPLNT N +YR
Subject  11636  YVSIRPGMSVHLEKLYYSPLQIYHIPLHHRSPCTYECMSRVLDCLSGKSPPVENPSLRPLACSLKCPPVSVHYYPPKCRSKP*LHRPLNT*NRHYR  11923

Range 9: 11609 to 11791 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.7 bits(124) 0.0 31/61(51%) 0/61(0%) Plus/Plus
Query      119  ICHKCQRLYSIVRIFGVQWPVGRRYIATYFPVVAICA*WTH*LTL*LMKCLIFSRW*FFPK  301
                IC K  +L SIV I GVQWPV  R+ AT++ V+     WT * T *  K  IF+RW*F  K
Subject  11609  ICRKYLKLCSIVPILGVQWPVELRFTATFWRVIVD*DWWTL*RTR*RTK*WIFNRW*FSRK  11791

Grapevine leafroll associated virus 3, complete genome

Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 10

Range 1: 11556 to 12182 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
422.3 bits(920) 0.0 174/209(83%) 0/209(0%) Plus/Plus
Query        1  SIECVWRWSTGLENFYPDPVVAVMTGGSSALSKVREDVANLPQVSKVIFDSSDFRCSVACGAKVYCDILSGSSNLRLVDTLTNTLTDEVSDFQPVVIFPKGSPIPCSYTHRYNVSGDEVVYGIFEGENNRAFLNEPTFRGMSKRRGEPKEMDIAVFKLSTDGTVSVIVNGEEVVNEYLVPGTTNILESLVYRSGREEVEAKAIPEYLKT  627
                S   V  + TGL+NFYPDPV+AVMTGGSSAL KVR DVA LPQ+SKV+FDS+DFRCSVACGAKVYCDIL+G+S LRLVDTLTNTLTDEV DFQPVVIFPKGSPIPCSYTHRY VSGDEVVYGIFEGENNRAFLNEPTFRG+SKRRG+PKE D+A   LSTDGTVSVIVNGEEV N+YLVPGTTN+L+SLVY+SGRE++EAKAIPEYL T
Subject  11556  SARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVAKLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVSGDEVVYGIFEGENNRAFLNEPTFRGVSKRRGDPKETDVAQINLSTDGTVSVIVNGEEVKNQYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTT  12182

Range 2: 11936 to 12181 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
133.5 bits(285) 0.0 60/82(73%) 0/82(0%) Minus/Minus
Query      381  VFRYSGIAFASTSSLPDL*TKDSNMLVVPGTRYSFTTSSPLTITLTVPSVDNLNTAISISFGSPLRLDIPRNVGSFRKALLF  626
                V +YSGIA AS SSLPDL T +S+  VVPGTRY F TSSPLT+T TVPSV+ L  A S+SFGSPLR D PRNVGSFRKALLF
Subject  11936  VVKYSGIALASKSSLPDLYTNESSTFVVPGTRY*FFTSSPLTMTDTVPSVERLICATSVSFGSPLRFDTPRNVGSFRKALLF  12181

Range 3: 11567 to 11767 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
97.3 bits(206) 0.0 43/67(64%) 0/67(0%) Minus/Minus
Query       12  PESMSQYTFAPQATEHRKSELSNITFDTCGKFATSSLTFDSALEPPVMTATTGSG*KFSKPVLHRQT  212
                P  +SQ T APQATEH KS LSN T D CG  ATS LT   AL+PPV+TA TGSG*K S+PVL+  T
Subject  11567  PAKISQ*TLAPQATEHLKSVLSNTTLDICGSLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTST  11767

Range 4: 11825 to 11881 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.4 bits(84) 0.0 17/19(89%) 0/19(0%) Minus/Minus
Query      270  VYEHGIGLPLGKITTG*KS  326
                VYE GIGLP GKITTG*KS
Subject  11825  VYEQGIGLPFGKITTG*KS  11881

Range 5: 11586 to 12182 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
166.9 bits(358) 0.0 81/199(41%) 0/199(0%) Minus/Minus
Query       31  CL*VLRYCFRFYFFPTRSVD*RF*YVSRPWH*ILVHDFLSVDDHTYRPICR*LKHCDIHLLRLTSTFGHTPERRFIQKGSVVLAFKDAVDDFIPTHVVPVSVRTRYRTTFGKNHHRLKIRHFIS*SVS*CVH*AQIATTGKYVAIYLRPTGH*TPKIRTIEYNL*HLWQIRYVLSYFR*RARTPRHDGHHRIWIKIFQT  627
                C  VLRYC     F  R + *R *YV  P + IL+   L+VDD  Y  IC  +    +    ++ TF +  E  FI K S++L FK A+  FI TH VP+SV   YRT F +NH+RLKI + + * + *CVH  Q A T + +A+    T H*T KI T+E++  +L Q  ++ S   *    P H+G +R+WIK+ +T
Subject  11586  CSQVLRYCLSLQIFSPRFIH*RI*YVCCPRYQILILYLLTVDDDGYCTICGKINLRHVSFFWVSPTFRYASECWFI*KSSIILPFKYAIHHFITTHCVPMSV*AGYRTAFRENHYRLKIHYLVR*RIR*CVHQPQSAITRQNIAVNFSSTSH*TSKIGTVEHDFRYLRQFGHITSDLN*ST*PPSHNGDNRVWIKVIKT  12182

Range 6: 11678 to 11989 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.9 bits(168) 0.0 43/104(41%) 0/104(0%) Plus/Plus
Query      123  ATSVKGYIR*FGFSVFSGLWGEGILRHTFR**QSAPSGHTN*HSN**SV*FSAGGDFSQR*SDTVFVHSQVQREWG*SRLRHL*RREQQSLSE*TDVPGYVQT*  434
                A  +   +R + F +FSGLW   +LR+   **+    GH N ++N     FS G DF +R SDT+ +HS V  EW *S + H+*R E  S S+*T++P  ++T*
Subject  11678  AADI*SRVRQYRF*MFSGLWS*SLLRYFGG**RIEAGGHINEYANGRGSGFSTGSDFPERQSDTLLIHS*VHSEW**SGVWHI*RGE**SFSK*TNIPRRIET*  11989

Range 7: 12032 to 12172 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.5 bits(69) 0.0 18/47(38%) 0/47(0%) Plus/Plus
Query      477  YRWDGKCDRQRRGSRERVSSARDD*HIRIFSLQIW*GRSRSESNTGV  617
                +RW     RQR G +E +S   D+   R  S+ IW  R     NTGV
Subject  12032  HRWYSIRHRQR*GGKESISGTWDNKRTRFVSV*IWERRFGG*GNTGV  12172

Range 8: 11905 to 12177 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
42.8 bits(87) 0.0 35/91(38%) 0/91(0%) Plus/Plus
Query      350  MKSSTASLKARTTEPF*MNRRSGVCPNVEVSRRRWISQCLSYLQMGR*V*SSTERKS*TSI*CQGRLTY*NL*STDLVGKK*KRKQYRST*  622
                MK   A LK R  E F*MN+ S    NV  ++++   + L + QM +   SST R+   +I   G+ TY*  *  +L  K  + +QYRST*
Subject  11905  MKWCMAYLKGRIIELF*MNQHSEAYRNVGETQKKLTWRRLIFPQMVQYPSSSTVRR*RINIWYLGQQTY*IR*CINLGEKIWRLRQYRST*  12177

Range 9: 11677 to 11856 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.3 bits(73) 0.0 22/60(37%) 0/60(0%) Plus/Plus
Query      122  CHKCQRLYSIVRIFGVQWPVGRRYIATYFPVVAICA*WTH*LTL*LMKCLIFSRW*FFPK  301
                C +  +  S V I  VQW V  ++ A ++ V+A    WTH*   *  +  IF+R *F  K
Subject  11677  CRRYLKSCSTVPILDVQWLVELKFTAIFWRVIAD*GWWTH*RIR*RTR*WIFNR**FSRK  11856

Range 10: 11713 to 11988 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.1 bits(114) 0.0 40/92(43%) 0/92(0%) Minus/Minus
Query      158  YVWTYPGTSVHSEXXXXXXXXXXXXXLHPHSRCTCECTNTVSDYLWEKSPPAENQTLHQLEC*LVCPLGADCYYRKVCRNIPSPHRPLNTEN  433
                YV    G  VH E+L  S LQ C   LH HS CT EC + VSD L  KS P EN     L   L+CP  +  YY    R+    H+PLN  N
Subject  11713  YVSIRLGMLVHLEKLYYSPLQICHTPLHHHSLCTYECMSRVSDCLSGKSLPVENPLPRPLAYSLMCPPASIRYYPPKYRSKL*LHKPLNI*N  11988

Grapevine leafroll associated virus 3 isolate 623, complete genome

Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 10

Range 1: 11556 to 12182 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
421.4 bits(918) 0.0 173/209(83%) 0/209(0%) Plus/Plus
Query        1  SIECVWRWSTGLENFYPDPVVAVMTGGSSALSKVREDVANLPQVSKVIFDSSDFRCSVACGAKVYCDILSGSSNLRLVDTLTNTLTDEVSDFQPVVIFPKGSPIPCSYTHRYNVSGDEVVYGIFEGENNRAFLNEPTFRGMSKRRGEPKEMDIAVFKLSTDGTVSVIVNGEEVVNEYLVPGTTNILESLVYRSGREEVEAKAIPEYLKT  627
                S   V  + TGL+NFYPDPV+AVMTGGSSAL KVR DVANLPQ+SKV+FD++DFRCSVACGAKVYCDIL+G+S LRLVDTLTNTLTDEV DFQPVVIFPKGSPIPCSYTHRY V G +VVYGIFEGENNRAFLNEPTFRG+SKRRG+PKE D+A F LSTDGTVSVIVNGEEV NEYLVPGTTN+L+SLVY+SGRE++EAKAIPEYL T
Subject  11556  SARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDNTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPKETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTT  12182

Range 2: 11936 to 12181 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
146.8 bits(314) 0.0 65/82(79%) 0/82(0%) Minus/Minus
Query      381  VFRYSGIAFASTSSLPDL*TKDSNMLVVPGTRYSFTTSSPLTITLTVPSVDNLNTAISISFGSPLRLDIPRNVGSFRKALLF  626
                V +YSGIA AS SSLPDL*T +S+  VVPGTRYSF TSSPLTIT TVPSVD LN A S+SFGSPLR D PRNVGSFRKALLF
Subject  11936  VVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVDKLNCATSVSFGSPLRFDTPRNVGSFRKALLF  12181

Range 3: 11567 to 11767 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
99.6 bits(211) 0.0 44/67(66%) 0/67(0%) Minus/Minus
Query       12  PESMSQYTFAPQATEHRKSELSNITFDTCGKFATSSLTFDSALEPPVMTATTGSG*KFSKPVLHRQT  212
                P  +SQ T APQATEH KS LSN T D CGK ATS LT   AL+PPV+TA TGSG*K S+PVL+  T
Subject  11567  PAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTST  11767

Range 4: 11825 to 11881 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.4 bits(84) 0.0 17/19(89%) 0/19(0%) Minus/Minus
Query      270  VYEHGIGLPLGKITTG*KS  326
                VYE GIGLP GKITTG*KS
Subject  11825  VYEQGIGLPFGKITTG*KS  11881

Range 5: 11586 to 12182 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
163.3 bits(350) 0.0 80/199(40%) 0/199(0%) Minus/Minus
Query       31  CL*VLRYCFRFYFFPTRSVD*RF*YVSRPWH*ILVHDFLSVDDHTYRPICR*LKHCDIHLLRLTSTFGHTPERRFIQKGSVVLAFKDAVDDFIPTHVVPVSVRTRYRTTFGKNHHRLKIRHFIS*SVS*CVH*AQIATTGKYVAIYLRPTGH*TPKIRTIEYNL*HLWQIRYVLSYFR*RARTPRHDGHHRIWIKIFQT  627
                C  VL YC     F    +D R *YV  P + I +  FL+V+++ YR +C *+K   + L  ++ TF + PERRFI K  V+L FK  V     TH V VSV T Y TTF +N++RLK+ H + * +   VH +Q A T + + + L PTG+ TPKI  +E+NL +L QI ++     *    P H+ ++R+WIK+ +T
Subject  11586  CGQVLWYCLSL*IFSPGFIDQRI*YVCCPGYQIFILYFLTVNNNRYRTVCG*IKLRYVGLFWVSPTFRYAPERRFI*KSPVILPFKYTVHHISTTHCVSVSV*TGYWTTFRENYYRLKVHHLVR*RIRQSVHQSQSAITCQNITVNLSPTGYRTPKISIVEHNLRYLRQIGHITPDLN*ST*PPSHNSNNRVWIKVVKT  12182

Range 6: 11672 to 12172 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
111.0 bits(236) 0.0 65/167(39%) 0/167(0%) Plus/Plus
Query      117  EFATSVKGYIR*FGFSVFSGLWGEGILRHTFR**QSAPSGHTN*HSN**SV*FSAGGDFSQR*SDTVFVHSQVQREWG*SRLRHL*RREQQSLSE*TDVPGYVQT*R*AEGDGYRSV*VIYRWDGKCDRQRRGSRERVSSARDD*HIRIFSLQIW*GRSRSESNTGV  617
                +FA  + G +R + F VF  LWG G+L +  R**++   GH + ++N      S G +F +R*S+T+F+HSQ+   W    +R++*R E Q  S+*TDVPG ++T*   + D   ++* I+R  G C   R GS+E +S  RD+   R   L I   R R   NT V
Subject  11672  QFAADI*GCVRQY*F*VFGSLWG*GLL*YFGR**RTETGGHFDEYANGRGGGLSTGSNFPER*SNTLFIHSQIHSGWWRCGVRYI*RGE*QGFSK*TDVPGRIET*GRPKRDRRSAI*FIHRRYGICYC*R*GSKE*ISGTRDNKRTRFVGL*IRERRFRG*GNTRV  12172

Range 7: 11917 to 12177 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
44.1 bits(90) 0.0 36/87(41%) 0/87(0%) Plus/Plus
Query      362  TASLKARTTEPF*MNRRSGVCPNVEVSRRRWISQCLSYLQMGR*V*SSTERKS*TSI*CQGRLTY*NL*STDLVGKK*KRKQYRST*  622
                T  LK R T  F*MNRRSG   NV  +++R   + L Y Q  R +   T RK   +I   G+ TY*   S +   K *+ +QY+ST*
Subject  11917  TVYLKGRITGLF*MNRRSGAYRNVGETQKRPT*RNLIYPQTVRYLLLLTVRK*RMNIWYPGQQTY*IRWSINPGEKI*RLRQYQST*  12177

Range 8: 11674 to 11856 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.3 bits(75) 0.0 23/61(38%) 0/61(0%) Plus/Plus
Query      119  ICHKCQRLYSIVRIFGVQWPVGRRYIATYFPVVAICA*WTH*LTL*LMKCLIFSRW*FFPK  301
                IC +  RL S + I GV+ PVG R+   ++ V+A    WT *   *  +   F+R *F  K
Subject  11674  ICRRYLRLCSTILILGVR*PVGLRFTVIFWQVIAD*DWWTL*RIR*RTRWWTFNR**FSRK  11856

Range 9: 11674 to 11901 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.3 bits(99) 0.0 29/76(38%) 0/76(0%) Minus/Minus
Query      119  HSRCTCECTNTVSDYLWEKSPPAENQTLHQLEC*LVCPLGADCYYRKVCRNIPSPHRPLNTENPNYRI*PLTLVAN  346
                H  C CEC N V DYL  K  P E+     L     CP  +  YY     + P PHR  NT N   R  P    AN
Subject  11674  HPLCICECMNRVLDYLSGKLLPVESPPPRPLAYSSKCPPVSVRYYLPKYHSKP*PHRLPNT*NQYCRTQP*ISAAN  11901

Range 10: 11950 to 11988 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
22.1 bits(42) 0.0 9/13(69%) 0/13(0%) Minus/Minus
Query      395  YVWTYPGTSVHSE  433
                YV   PGTSVH E
Subject  11950  YVSIRPGTSVHLE  11988

Grapevine leafroll associated virus 3 isolate GH24, complete genome

Sequence ID: KM058745.1 Length: 18493 Number of Matches: 10

Range 1: 11580 to 12182 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
477.6 bits(1036) 0.0 199/201(99%) 0/201(0%) Minus/Minus
Query       25  CL*VLRYCFRFYFFPTRSVD*RF*YVSRPWH*ILVHDFLSVDDHTYRPICR*LKHCDIHLLRLTSTFGHTPERRFIQKGSVVLAFKDAVDDFIPTHVVPVSVRTRYRTTFGKNHHRLKIRHFIS*SVS*CVH*AQIATTGKYVAIYLRPTGH*TPKIRTIEYNL*HLWQIRYVLSYFR*RARTPRHDGHHRIWIKIFQTRA  627
                CL*VLRYCFRF FFPTRSVD*RF*YVSRPWH*ILVHDFLSVDDHTYRPICR*LKHCDIHLLRLTSTFGHTPERRFIQKGSVVLAFKDAVDDFIPTHVVPVSVRTRYRTTFGKNHHRLKIRHFIS*SVS*CVH*AQIATTGKYVAIYLRPTGH*TPKIRTIEYNL*HLWQIRYVLSYFR*RARTPRHDGHHRIWIKIFQT A
Subject  11580  CL*VLRYCFRF*FFPTRSVD*RF*YVSRPWH*ILVHDFLSVDDHTYRPICR*LKHCDIHLLRLTSTFGHTPERRFIQKGSVVLAFKDAVDDFIPTHVVPVSVRTRYRTTFGKNHHRLKIRHFIS*SVS*CVH*AQIATTGKYVAIYLRPTGH*TPKIRTIEYNL*HLWQIRYVLSYFR*RARTPRHDGHHRIWIKIFQTGA  12182

Range 2: 11577 to 12182 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
472.0 bits(1029) 0.0 200/202(99%) 0/202(0%) Plus/Plus
Query       22  WSTGLENFYPDPVVAVMTGGSSALSKVREDVANLPQVSKVIFDSSDFRCSVACGAKVYCDILSGSSNLRLVDTLTNTLTDEVSDFQPVVIFPKGSPIPCSYTHRYNVSGDEVVYGIFEGENNRAFLNEPTFRGMSKRRGEPKEMDIAVFKLSTDGTVSVIVNGEEVVNEYLVPGTTNILESLVYRSGREEVEAKAIPEYLKT  627
                +STGLENFYPDPVVAVMTGGSSALSKVREDVANLPQVSKVIFDSSDFRCSVACGAKVYCDILSGSSNLRLVDTLTNTLTDEVSDFQPVVIFPKGSPIPCSYTHRYNVSGDEVVYGIFEGENNRAFLNEPTFRGMSKRRGEPKEMDIAVFKLSTDGTVSVIVNGEEVVNEYLVPGTTNILESLVYRSGREE+EAKAIPEYLKT
Subject  11577  FSTGLENFYPDPVVAVMTGGSSALSKVREDVANLPQVSKVIFDSSDFRCSVACGAKVYCDILSGSSNLRLVDTLTNTLTDEVSDFQPVVIFPKGSPIPCSYTHRYNVSGDEVVYGIFEGENNRAFLNEPTFRGMSKRRGEPKEMDIAVFKLSTDGTVSVIVNGEEVVNEYLVPGTTNILESLVYRSGREELEAKAIPEYLKT  12182

Range 3: 11573 to 12181 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
451.5 bits(979) 0.0 199/203(98%) 0/203(0%) Plus/Plus
Query       18  AVEHGFGKFLSRSCGGRHDGGF*RAIESKRGRSEFATSVKGYIR*FGFSVFSGLWGEGILRHTFR**QSAPSGHTN*HSN**SV*FSAGGDFSQR*SDTVFVHSQVQREWG*SRLRHL*RREQQSLSE*TDVPGYVQT*R*AEGDGYRSV*VIYRWDGKCDRQRRGSRERVSSARDD*HIRIFSLQIW*GRSRSESNTGVPKD  626
                +V H FGKFLSRSCGGRHDGGF*RAIESKRGRSEFATSVKGYIR*FGFSVFSGLWGEGILRHTFR**QSAPSGHTN*HSN**SV*FSAGGDFSQR*SDTVFVHSQVQREWG*SRLRHL*RREQQSLSE*TDVPGYVQT*R*AEGDGYRSV*VIYRWDGKCDRQRRGSRERVSSARDD*HIRIFSLQIW*GR RSESNTGVPKD
Subject  11573  SV*HRFGKFLSRSCGGRHDGGF*RAIESKRGRSEFATSVKGYIR*FGFSVFSGLWGEGILRHTFR**QSAPSGHTN*HSN**SV*FSAGGDFSQR*SDTVFVHSQVQREWG*SRLRHL*RREQQSLSE*TDVPGYVQT*R*AEGDGYRSV*VIYRWDGKCDRQRRGSRERVSSARDD*HIRIFSLQIW*GRIRSESNTGVPKD  12181

Range 4: 11581 to 11856 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
221.5 bits(477) 0.0 91/92(99%) 0/92(0%) Plus/Plus
Query       26  ARVWKIFIQILWWPS*RGVLARYRK*ERT*RICHKCQRLYSIVRIFGVQWPVGRRYIATYFPVVAICA*WTH*LTL*LMKCLIFSRW*FFPK  301
                A VWKIFIQILWWPS*RGVLARYRK*ERT*RICHKCQRLYSIVRIFGVQWPVGRRYIATYFPVVAICA*WTH*LTL*LMKCLIFSRW*FFPK
Subject  11581  APVWKIFIQILWWPS*RGVLARYRK*ERT*RICHKCQRLYSIVRIFGVQWPVGRRYIATYFPVVAICA*WTH*LTL*LMKCLIFSRW*FFPK  11856

Range 5: 11902 to 12180 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
201.8 bits(434) 0.0 92/93(99%) 0/93(0%) Plus/Plus
Query      347  GMKSSTASLKARTTEPF*MNRRSGVCPNVEVSRRRWISQCLSYLQMGR*V*SSTERKS*TSI*CQGRLTY*NL*STDLVGKK*KRKQYRST*R  625
                GMKSSTASLKARTTEPF*MNRRSGVCPNVEVSRRRWISQCLSYLQMGR*V*SSTERKS*TSI*CQGRLTY*NL*STDLVGK *KRKQYRST*R
Subject  11902  GMKSSTASLKARTTEPF*MNRRSGVCPNVEVSRRRWISQCLSYLQMGR*V*SSTERKS*TSI*CQGRLTY*NL*STDLVGKN*KRKQYRST*R  12180

Range 6: 11575 to 12030 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
336.5 bits(728) 0.0 150/152(99%) 0/152(0%) Minus/Minus
Query       20  IT*TLRYPSPSAHLYVWTYPGTSVHSEXXXXXXXXXXXXXLHPHSRCTCECTNTVSDYLWEKSPPAENQTLHQLEC*LVCPLGADCYYRKVCRNIPSPHRPLNTENPNYRI*PLTLVANSLRPLLLSIAR*NPPS*RPPQDLDKNFPNPCST  475
                IT*TLRYPSPSAHLYVWTYPGTSVHSERLCCSRLQRCRRRLHPHSRCTCECTNTVSDYLWEKSPPAENQTLHQLEC*LVCPLGADCYYRKVCRNIPSPHRPLNTENPNYRI*PLTLVANSLRPLLLSIAR*NPPS*RPPQDLDKNFPN C T
Subject  11575  IT*TLRYPSPSAHLYVWTYPGTSVHSERLCCSRLQRCRRRLHPHSRCTCECTNTVSDYLWEKSPPAENQTLHQLEC*LVCPLGADCYYRKVCRNIPSPHRPLNTENPNYRI*PLTLVANSLRPLLLSIAR*NPPS*RPPQDLDKNFPNRC*T  12030

Range 7: 12082 to 12180 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.8 bits(122) 0.0 32/33(97%) 0/33(0%) Minus/Minus
Query      527  SLGTPVXXXXXXLPYQICRLKILIC*SSLALDT  625
                SLGTPVLLSLL+LPYQICRLKILIC*SSLALDT
Subject  12082  SLGTPVLLSLLILPYQICRLKILIC*SSLALDT  12180

Range 8: 11936 to 12181 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
184.8 bits(397) 0.0 81/82(99%) 0/82(0%) Minus/Minus
Query      381  VFRYSGIAFASTSSLPDL*TKDSNMLVVPGTRYSFTTSSPLTITLTVPSVDNLNTAISISFGSPLRLDIPRNVGSFRKALLF  626
                VFRYSGIAFAS SSLPDL*TKDSNMLVVPGTRYSFTTSSPLTITLTVPSVDNLNTAISISFGSPLRLDIPRNVGSFRKALLF
Subject  11936  VFRYSGIAFASNSSLPDL*TKDSNMLVVPGTRYSFTTSSPLTITLTVPSVDNLNTAISISFGSPLRLDIPRNVGSFRKALLF  12181

Range 9: 11576 to 11767 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
150.0 bits(321) 0.0 63/64(98%) 0/64(0%) Minus/Minus
Query       21  PESMSQYTFAPQATEHRKSELSNITFDTCGKFATSSLTFDSALEPPVMTATTGSG*KFSKPVLH  212
                PESMSQYTFAPQATEHRKSELSNITFDTCGKFATSSLTFDSALEPPVMTATTGSG*KFSKPVL+
Subject  11576  PESMSQYTFAPQATEHRKSELSNITFDTCGKFATSSLTFDSALEPPVMTATTGSG*KFSKPVLN  11767

Range 10: 11822 to 11881 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.6 bits(102) 0.0 20/20(100%) 0/20(0%) Minus/Minus
Query      267  VYEHGIGLPLGKITTG*KSD  326
                VYEHGIGLPLGKITTG*KSD
Subject  11822  VYEHGIGLPLGKITTG*KSD  11881

Nucleotide Sequence (1013 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
102
204
306
408
510
612
714
816
918
1013

Descriptions

Alignments

Grapevine leafroll associated virus 3 isolate 623, complete genome

Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 9

Range 1: 12739 to 13746 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
782.8 bits(1702) 0.0 331/336(99%) 0/336(0%) Minus/Plus
Query        3  LGIQEGKYVDVTQNLESTIVPLRVMEIKKRRVSAHVALPKVVSAYVDLYTNLQELLSDEVTKARTDTVSAYAADSMAFLVKMLPLTAREQWLRDMLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIKSFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYRLRLTPVAALIIMLIYYSVYGTNATRIKRRPDFLNVRIRGKVEKVSLRGVEDRAYRISEKRGINAQRILCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRSMINHADHASIIHYIKTNENQVTGTTLP  1010
                + +Q GKYVDVTQNLESTIVPLRVMEIKKRRVSAHVALPKVVSAYVDLYTNLQELLSDEVTKARTDTVSAYAADSMAFLVKMLPLTAREQWLRDMLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIKSFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYRLRLTPVAALIIMLIYYSVYGTNATRIKRRPDFLNVRI+GKVEKVSLRGVEDRAYRISEKRGINAQRILCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRSMINHADHASIIHYIKTNENQVTGTTLP
Subject  12739  VSVQVGKYVDVTQNLESTIVPLRVMEIKKRRVSAHVALPKVVSAYVDLYTNLQELLSDEVTKARTDTVSAYAADSMAFLVKMLPLTAREQWLRDMLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIKSFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYRLRLTPVAALIIMLIYYSVYGTNATRIKRRPDFLNVRIKGKVEKVSLRGVEDRAYRISEKRGINAQRILCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRSMINHADHASIIHYIKTNENQVTGTTLP  13746

Range 2: 12747 to 13748 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
770.4 bits(1675) 0.0 334/334(100%) 0/334(0%) Minus/Plus
Query        1  SGGEVCGRNAEFRKYDRAVKSYGNKEEASIGARCFTEGGICIRRSLYELAGVAVR*SN*GQNRYSFGLRC*LYGFLS*DVAPDSP*AVVERHVRISASTKTTGKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTICAYRVLRPLSRAFILFL*VEL*DDDR*RGKDMPGDRREVGAPSNGGKL*VKINPSGGLNNYADLLLRLRHKRYQD*TTPRFPQCEDKRKSRESFVTGGRRSRL*NIRKARDKRSTYIV*VL**SHMSG*ATLRHSQKQLEDAELCRWYVGV*HG*LYNF*GEKYDQPCRSR*HYTLY*DERKPGYRDYSTT  1002
                SGGEVCGRNAEFRKYDRAVKSYGNKEEASIGARCFTEGGICIRRSLYELAGVAVR*SN*GQNRYSFGLRC*LYGFLS*DVAPDSP*AVVERHVRISASTKTTGKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTICAYRVLRPLSRAFILFL*VEL*DDDR*RGKDMPGDRREVGAPSNGGKL*VKINPSGGLNNYADLLLRLRHKRYQD*TTPRFPQCEDKRKSRESFVTGGRRSRL*NIRKARDKRSTYIV*VL**SHMSG*ATLRHSQKQLEDAELCRWYVGV*HG*LYNF*GEKYDQPCRSR*HYTLY*DERKPGYRDYSTT
Subject  12747  SGGEVCGRNAEFRKYDRAVKSYGNKEEASIGARCFTEGGICIRRSLYELAGVAVR*SN*GQNRYSFGLRC*LYGFLS*DVAPDSP*AVVERHVRISASTKTTGKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTICAYRVLRPLSRAFILFL*VEL*DDDR*RGKDMPGDRREVGAPSNGGKL*VKINPSGGLNNYADLLLRLRHKRYQD*TTPRFPQCEDKRKSRESFVTGGRRSRL*NIRKARDKRSTYIV*VL**SHMSG*ATLRHSQKQLEDAELCRWYVGV*HG*LYNF*GEKYDQPCRSR*HYTLY*DERKPGYRDYSTT  13748

Range 3: 12746 to 13747 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
765.4 bits(1664) 0.0 334/334(100%) 0/334(0%) Plus/Minus
Query        2  VVE*SR*PGFRSS*YSV*C*RDLHG*SYFSP*KLYNQPCHTPTYHLHNSASSNCFCECRNVA*PDM*DHYSTYTIYVERLSRAFLIFYRRDLLPPVTKLSRLFLLSSH*GNLGVV*SW*RLCRKRSSKSA*LLRPPLGLILTYNFPPLDGAPTSRRSPGISFPLYLSSSHNST*RNRMKARERGRRTL*AHMVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLPVVFVLADILTCLSTTAHGLSGATS*LRKP*SQQRRPKLYRFWP*LLHLTATPASSYKDLRMQIPPSVKQRAPILASSLFP*LLTARSYFLNSALRPHTSPPE  1003
                VVE*SR*PGFRSS*YSV*C*RDLHG*SYFSP*KLYNQPCHTPTYHLHNSASSNCFCECRNVA*PDM*DHYSTYTIYVERLSRAFLIFYRRDLLPPVTKLSRLFLLSSH*GNLGVV*SW*RLCRKRSSKSA*LLRPPLGLILTYNFPPLDGAPTSRRSPGISFPLYLSSSHNST*RNRMKARERGRRTL*AHMVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLPVVFVLADILTCLSTTAHGLSGATS*LRKP*SQQRRPKLYRFWP*LLHLTATPASSYKDLRMQIPPSVKQRAPILASSLFP*LLTARSYFLNSALRPHTSPPE
Subject  12746  VVE*SR*PGFRSS*YSV*C*RDLHG*SYFSP*KLYNQPCHTPTYHLHNSASSNCFCECRNVA*PDM*DHYSTYTIYVERLSRAFLIFYRRDLLPPVTKLSRLFLLSSH*GNLGVV*SW*RLCRKRSSKSA*LLRPPLGLILTYNFPPLDGAPTSRRSPGISFPLYLSSSHNST*RNRMKARERGRRTL*AHMVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLPVVFVLADILTCLSTTAHGLSGATS*LRKP*SQQRRPKLYRFWP*LLHLTATPASSYKDLRMQIPPSVKQRAPILASSLFP*LLTARSYFLNSALRPHTSPPE  13747

Range 4: 13051 to 13746 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
554.6 bits(1204) 0.0 231/232(100%) 0/232(0%) Plus/Minus
Query        3  W*SSPGNLVFVRLNIVYNASVICMVDHTSHLRSYTISRVIRQRTIYITQRLPIVSANAVMSPSQTCEITIVPTQYTLSVYPALF*YSIGAIFYPP*RNFLDFSSYPHIEEIWASFNPGSVCAVNGVVNQHNY*GRHWG*S*PIIFLH*TAHQLLGDLRAYLSPFTCRHLITQPREIG*KLVKGVEGLYRHIWF*VFNTPGCVLVEKRFYDQLERSDHVIYPSYSYVVGKICR  698
                W*SSPGNLVFVRLNIVYNASVICMVDHTSHLRSYTISRVIRQRTIYITQRLPIVSANAVMSPSQTCEITIVPTQYTLSVYPALF*YSIGAIFYPP*RNFLDFS YPHIEEIWASFNPGSVCAVNGVVNQHNY*GRHWG*S*PIIFLH*TAHQLLGDLRAYLSPFTCRHLITQPREIG*KLVKGVEGLYRHIWF*VFNTPGCVLVEKRFYDQLERSDHVIYPSYSYVVGKICR
Subject  13051  W*SSPGNLVFVRLNIVYNASVICMVDHTSHLRSYTISRVIRQRTIYITQRLPIVSANAVMSPSQTCEITIVPTQYTLSVYPALF*YSIGAIFYPP*RNFLDFSFYPHIEEIWASFNPGSVCAVNGVVNQHNY*GRHWG*S*PIIFLH*TAHQLLGDLRAYLSPFTCRHLITQPREIG*KLVKGVEGLYRHIWF*VFNTPGCVLVEKRFYDQLERSDHVIYPSYSYVVGKICR  13746

Range 5: 12745 to 13014 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
210.0 bits(452) 0.0 89/90(99%) 0/90(0%) Plus/Minus
Query      735  QPLLTGCQGQHLN*ESHRVSSVGRNCIGSGLSYFI*QQLLQVRIKIYVCRYHLR*SNVRRYSPLLYFHNS*RHDRTF*ILRYVHILPLLN  1004
                QPLLTGCQGQHLN*ESHRVSSVGRNCIGSGLSYFI*QQLLQVRIKIYVCRYHLR*SNVRRYSPLLYFHNS*RHDRTF*ILRYVHILP LN
Subject  12745  QPLLTGCQGQHLN*ESHRVSSVGRNCIGSGLSYFI*QQLLQVRIKIYVCRYHLR*SNVRRYSPLLYFHNS*RHDRTF*ILRYVHILPHLN  13014

Range 6: 13227 to 13748 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
376.3 bits(815) 0.0 173/174(99%) 0/174(0%) Plus/Minus
Query        1  CGRVVPVTWFSFVLI*CIMLA*SAWLIILLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNIR*AFIPRFSDIL*ARSSTPRNETFSTFPLILTLRKSGRRLILVAFVP*TE**ISIIIKAATGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVIS*LNL  522
                CGRVVPVTWFSFVLI*CIMLA*SAWLIILLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNIR*AFIPRFSDIL*ARSSTPRNETFSTFP ILTLRKSGRRLILVAFVP*TE**ISIIIKAATGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVIS*LNL
Subject  13227  CGRVVPVTWFSFVLI*CIMLA*SAWLIILLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNIR*AFIPRFSDIL*ARSSTPRNETFSTFPFILTLRKSGRRLILVAFVP*TE**ISIIIKAATGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVIS*LNL  13748

Range 7: 12747 to 13184 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
329.1 bits(712) 0.0 145/146(99%) 0/146(0%) Plus/Minus
Query      565  IGTYGFKSLIPPGVSLLKNDFMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPNMSLNHCSRAVRGNILTKKAIESAA*AETVSVLALVTSSDSNSCKFV*RSTYADTTFGKATCADTRLFFISITLNGTIVLSKFCVTSTYFPS*  1002
                IGTYGFKSLIPPGVSLLKNDFMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPNMSLNHCSRAVRGNILTKKAIESAA*AETVSVLALVTSSDSNSCKFV*RSTYADTTFGKATCADTRLFFISITLNGTIVLSKFCVTSTYFP+*
Subject  12747  IGTYGFKSLIPPGVSLLKNDFMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPNMSLNHCSRAVRGNILTKKAIESAA*AETVSVLALVTSSDSNSCKFV*RSTYADTTFGKATCADTRLFFISITLNGTIVLSKFCVTSTYFPT*  13184

Range 8: 12746 to 13594 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
614.1 bits(1334) 0.0 281/283(99%) 0/283(0%) Minus/Plus
Query      155  FRRGSMWT*RRI*KVRSCR*ELWK*RRGEXXXXXXXXXXXLHT*IFIRTCRSCCQMK*LRPEPIQFRPTLLTLWLS*LRCCP*QPVSSG*ETC*DIC*YEDDRQIFPTT*E*LGYMT*SLRSSWS*NRFSTRTHPGVLKT*NHMCL*SPSTPFTSFHPISLG*VMR*RQVKGERYARRSPRSWCAV*WRKIIG*D*PQWRP**LC*FTTPFTAQTLPGLNDAQISSM*G*EEKSRKFRYGG*KIAPIEYQKSAG*TLNVYCVGTIVISHVWLGDITAFAETIG  1003
                FR GSMWT*RRI*KVRSCR*ELWK*RRGEYRRTLLYRRWYLHT*IFIRTCRSCCQMK*LRPEPIQFRPTLLTLWLS*LRCCP*QPVSSG*ETC*DIC*YEDDRQIFPTT*E*LGYMT*SLRSSWS*NRFSTRTHPGVLKT*NHMCL*SPSTPFTSFHPISLG*VMR*RQVKGERYARRSPRSWCAV*WRKIIG*D*PQWRP**LC*FTTPFTAQTLPGLNDAQISSM*G*+EKSRKFRYGG*KIAPIEYQKSAG*TLNVYCVGTIVISHVWLGDITAFAETIG
Subject  12746  FRWGSMWT*RRI*KVRSCR*ELWK*RRGEYRRTLLYRRWYLHT*IFIRTCRSCCQMK*LRPEPIQFRPTLLTLWLS*LRCCP*QPVSSG*ETC*DIC*YEDDRQIFPTT*E*LGYMT*SLRSSWS*NRFSTRTHPGVLKT*NHMCL*SPSTPFTSFHPISLG*VMR*RQVKGERYARRSPRSWCAV*WRKIIG*D*PQWRP**LC*FTTPFTAQTLPGLNDAQISSM*G*KEKSRKFRYGG*KIAPIEYQKSAG*TLNVYCVGTIVISHVWLGDITAFAETIG  13594

Range 9: 13637 to 13747 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.4 bits(167) 0.0 37/37(100%) 0/37(0%) Minus/Plus
Query        2  LIV*LLR*EV*STMQITLALYTILRRTKTRLPGLLYH  112
                LIV*LLR*EV*STMQITLALYTILRRTKTRLPGLLYH
Subject  13637  LIV*LLR*EV*STMQITLALYTILRRTKTRLPGLLYH  13747

Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome

Sequence ID: KX701860.1 Length: 18020 Number of Matches: 9

Range 1: 12257 to 13264 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
780.5 bits(1697) 0.0 329/336(98%) 0/336(0%) Minus/Plus
Query        3  LGIQEGKYVDVTQNLESTIVPLRVMEIKKRRVSAHVALPKVVSAYVDLYTNLQELLSDEVTKARTDTVSAYAADSMAFLVKMLPLTAREQWLRDMLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIKSFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYRLRLTPVAALIIMLIYYSVYGTNATRIKRRPDFLNVRIRGKVEKVSLRGVEDRAYRISEKRGINAQRILCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRSMINHADHASIIHYIKTNENQVTGTTLP  1010
                + +Q GKYVD+TQNLESTIVPLRVMEIKKRRVSAHVALPKVVSAYVDLYTNLQELLSDEVTKARTDTVSAYA DSMAFLVKMLPLTAREQWLRDMLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIKSFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYRLRLTPVAALIIMLIYYSVYGTNATRIKRRPDFLNVRI+GKVEKVSLRGVEDRAYRISEKRGINAQRILCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRSMINHADHASIIHYIKTNENQVTGTTLP
Subject  12257  VSVQVGKYVDITQNLESTIVPLRVMEIKKRRVSAHVALPKVVSAYVDLYTNLQELLSDEVTKARTDTVSAYATDSMAFLVKMLPLTAREQWLRDMLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIKSFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYRLRLTPVAALIIMLIYYSVYGTNATRIKRRPDFLNVRIKGKVEKVSLRGVEDRAYRISEKRGINAQRILCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRSMINHADHASIIHYIKTNENQVTGTTLP  13264

Range 2: 12265 to 13266 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
763.1 bits(1659) 0.0 332/334(99%) 0/334(0%) Minus/Plus
Query        1  SGGEVCGRNAEFRKYDRAVKSYGNKEEASIGARCFTEGGICIRRSLYELAGVAVR*SN*GQNRYSFGLRC*LYGFLS*DVAPDSP*AVVERHVRISASTKTTGKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTICAYRVLRPLSRAFILFL*VEL*DDDR*RGKDMPGDRREVGAPSNGGKL*VKINPSGGLNNYADLLLRLRHKRYQD*TTPRFPQCEDKRKSRESFVTGGRRSRL*NIRKARDKRSTYIV*VL**SHMSG*ATLRHSQKQLEDAELCRWYVGV*HG*LYNF*GEKYDQPCRSR*HYTLY*DERKPGYRDYSTT  1002
                SGGEVCG NAEFRKYDRAVKSYGNKEEASIGARCFTEGGICIRRSLYELAGVAVR*SN*GQNRYSFGLR *LYGFLS*DVAPDSP*AVVERHVRISASTKTTGKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTICAYRVLRPLSRAFILFL*VEL*DDDR*RGKDMPGDRREVGAPSNGGKL*VKINPSGGLNNYADLLLRLRHKRYQD*TTPRFPQCEDKRKSRESFVTGGRRSRL*NIRKARDKRSTYIV*VL**SHMSG*ATLRHSQKQLEDAELCRWYVGV*HG*LYNF*GEKYDQPCRSR*HYTLY*DERKPGYRDYSTT
Subject  12265  SGGEVCGHNAEFRKYDRAVKSYGNKEEASIGARCFTEGGICIRRSLYELAGVAVR*SN*GQNRYSFGLRY*LYGFLS*DVAPDSP*AVVERHVRISASTKTTGKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTICAYRVLRPLSRAFILFL*VEL*DDDR*RGKDMPGDRREVGAPSNGGKL*VKINPSGGLNNYADLLLRLRHKRYQD*TTPRFPQCEDKRKSRESFVTGGRRSRL*NIRKARDKRSTYIV*VL**SHMSG*ATLRHSQKQLEDAELCRWYVGV*HG*LYNF*GEKYDQPCRSR*HYTLY*DERKPGYRDYSTT  13266

Range 3: 12264 to 13265 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
757.6 bits(1647) 0.0 332/334(99%) 0/334(0%) Plus/Minus
Query        2  VVE*SR*PGFRSS*YSV*C*RDLHG*SYFSP*KLYNQPCHTPTYHLHNSASSNCFCECRNVA*PDM*DHYSTYTIYVERLSRAFLIFYRRDLLPPVTKLSRLFLLSSH*GNLGVV*SW*RLCRKRSSKSA*LLRPPLGLILTYNFPPLDGAPTSRRSPGISFPLYLSSSHNST*RNRMKARERGRRTL*AHMVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLPVVFVLADILTCLSTTAHGLSGATS*LRKP*SQQRRPKLYRFWP*LLHLTATPASSYKDLRMQIPPSVKQRAPILASSLFP*LLTARSYFLNSALRPHTSPPE  1003
                VVE*SR*PGFRSS*YSV*C*RDLHG*SYFSP*KLYNQPCHTPTYHLHNSASSNCFCECRNVA*PDM*DHYSTYTIYVERLSRAFLIFYRRDLLPPVTKLSRLFLLSSH*GNLGVV*SW*RLCRKRSSKSA*LLRPPLGLILTYNFPPLDGAPTSRRSPGISFPLYLSSSHNST*RNRMKARERGRRTL*AHMVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLPVVFVLADILTCLSTTAHGLSGATS*LRKP*SQ RRPKLYRFWP*LLHLTATPASSYKDLRMQIPPSVKQRAPILASSLFP*LLTARSYFLNSAL PHTSPPE
Subject  12264  VVE*SR*PGFRSS*YSV*C*RDLHG*SYFSP*KLYNQPCHTPTYHLHNSASSNCFCECRNVA*PDM*DHYSTYTIYVERLSRAFLIFYRRDLLPPVTKLSRLFLLSSH*GNLGVV*SW*RLCRKRSSKSA*LLRPPLGLILTYNFPPLDGAPTSRRSPGISFPLYLSSSHNST*RNRMKARERGRRTL*AHMVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLPVVFVLADILTCLSTTAHGLSGATS*LRKP*SQ*RRPKLYRFWP*LLHLTATPASSYKDLRMQIPPSVKQRAPILASSLFP*LLTARSYFLNSALCPHTSPPE  13265

Range 4: 12569 to 13264 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
554.6 bits(1204) 0.0 231/232(100%) 0/232(0%) Plus/Minus
Query        3  W*SSPGNLVFVRLNIVYNASVICMVDHTSHLRSYTISRVIRQRTIYITQRLPIVSANAVMSPSQTCEITIVPTQYTLSVYPALF*YSIGAIFYPP*RNFLDFSSYPHIEEIWASFNPGSVCAVNGVVNQHNY*GRHWG*S*PIIFLH*TAHQLLGDLRAYLSPFTCRHLITQPREIG*KLVKGVEGLYRHIWF*VFNTPGCVLVEKRFYDQLERSDHVIYPSYSYVVGKICR  698
                W*SSPGNLVFVRLNIVYNASVICMVDHTSHLRSYTISRVIRQRTIYITQRLPIVSANAVMSPSQTCEITIVPTQYTLSVYPALF*YSIGAIFYPP*RNFLDFS YPHIEEIWASFNPGSVCAVNGVVNQHNY*GRHWG*S*PIIFLH*TAHQLLGDLRAYLSPFTCRHLITQPREIG*KLVKGVEGLYRHIWF*VFNTPGCVLVEKRFYDQLERSDHVIYPSYSYVVGKICR
Subject  12569  W*SSPGNLVFVRLNIVYNASVICMVDHTSHLRSYTISRVIRQRTIYITQRLPIVSANAVMSPSQTCEITIVPTQYTLSVYPALF*YSIGAIFYPP*RNFLDFSFYPHIEEIWASFNPGSVCAVNGVVNQHNY*GRHWG*S*PIIFLH*TAHQLLGDLRAYLSPFTCRHLITQPREIG*KLVKGVEGLYRHIWF*VFNTPGCVLVEKRFYDQLERSDHVIYPSYSYVVGKICR  13264

Range 5: 12263 to 12532 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
210.0 bits(452) 0.0 89/90(99%) 0/90(0%) Plus/Minus
Query      735  QPLLTGCQGQHLN*ESHRVSSVGRNCIGSGLSYFI*QQLLQVRIKIYVCRYHLR*SNVRRYSPLLYFHNS*RHDRTF*ILRYVHILPLLN  1004
                QPLLTGCQGQHLN*ESHRVSSVGRNCIGSGLSYFI*QQLLQVRIKIYVCRYHLR*SNVRRYSPLLYFHNS*RHDRTF*ILRYVHILP LN
Subject  12263  QPLLTGCQGQHLN*ESHRVSSVGRNCIGSGLSYFI*QQLLQVRIKIYVCRYHLR*SNVRRYSPLLYFHNS*RHDRTF*ILRYVHILPHLN  12532

Range 6: 12745 to 13266 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
376.3 bits(815) 0.0 173/174(99%) 0/174(0%) Plus/Minus
Query        1  CGRVVPVTWFSFVLI*CIMLA*SAWLIILLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNIR*AFIPRFSDIL*ARSSTPRNETFSTFPLILTLRKSGRRLILVAFVP*TE**ISIIIKAATGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVIS*LNL  522
                CGRVVPVTWFSFVLI*CIMLA*SAWLIILLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNIR*AFIPRFSDIL*ARSSTPRNETFSTFP ILTLRKSGRRLILVAFVP*TE**ISIIIKAATGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVIS*LNL
Subject  12745  CGRVVPVTWFSFVLI*CIMLA*SAWLIILLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNIR*AFIPRFSDIL*ARSSTPRNETFSTFPFILTLRKSGRRLILVAFVP*TE**ISIIIKAATGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVIS*LNL  13266

Range 7: 12265 to 12702 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
324.6 bits(702) 0.0 143/146(98%) 0/146(0%) Plus/Minus
Query      565  IGTYGFKSLIPPGVSLLKNDFMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPNMSLNHCSRAVRGNILTKKAIESAA*AETVSVLALVTSSDSNSCKFV*RSTYADTTFGKATCADTRLFFISITLNGTIVLSKFCVTSTYFPS*  1002
                IGTYGFKSLIPPGVSLLKNDFMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPNMSLNHCSRAVRGNILTKKAIES A*AETVSVLALVTSSDSNSCKFV*RSTYADTTFGKATCADTRLFFISITLNGTIVLSKFCV STYFP+*
Subject  12265  IGTYGFKSLIPPGVSLLKNDFMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPNMSLNHCSRAVRGNILTKKAIESVA*AETVSVLALVTSSDSNSCKFV*RSTYADTTFGKATCADTRLFFISITLNGTIVLSKFCVMSTYFPT*  12702

Range 8: 12264 to 13112 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
614.1 bits(1334) 0.0 281/283(99%) 0/283(0%) Minus/Plus
Query      155  FRRGSMWT*RRI*KVRSCR*ELWK*RRGEXXXXXXXXXXXLHT*IFIRTCRSCCQMK*LRPEPIQFRPTLLTLWLS*LRCCP*QPVSSG*ETC*DIC*YEDDRQIFPTT*E*LGYMT*SLRSSWS*NRFSTRTHPGVLKT*NHMCL*SPSTPFTSFHPISLG*VMR*RQVKGERYARRSPRSWCAV*WRKIIG*D*PQWRP**LC*FTTPFTAQTLPGLNDAQISSM*G*EEKSRKFRYGG*KIAPIEYQKSAG*TLNVYCVGTIVISHVWLGDITAFAETIG  1003
                FR GSMWT*RRI*KVRSCR*ELWK*RRGEYRRTLLYRRWYLHT*IFIRTCRSCCQMK*LRPEPIQFRPTLLTLWLS*LRCCP*QPVSSG*ETC*DIC*YEDDRQIFPTT*E*LGYMT*SLRSSWS*NRFSTRTHPGVLKT*NHMCL*SPSTPFTSFHPISLG*VMR*RQVKGERYARRSPRSWCAV*WRKIIG*D*PQWRP**LC*FTTPFTAQTLPGLNDAQISSM*G*+EKSRKFRYGG*KIAPIEYQKSAG*TLNVYCVGTIVISHVWLGDITAFAETIG
Subject  12264  FRWGSMWT*RRI*KVRSCR*ELWK*RRGEYRRTLLYRRWYLHT*IFIRTCRSCCQMK*LRPEPIQFRPTLLTLWLS*LRCCP*QPVSSG*ETC*DIC*YEDDRQIFPTT*E*LGYMT*SLRSSWS*NRFSTRTHPGVLKT*NHMCL*SPSTPFTSFHPISLG*VMR*RQVKGERYARRSPRSWCAV*WRKIIG*D*PQWRP**LC*FTTPFTAQTLPGLNDAQISSM*G*KEKSRKFRYGG*KIAPIEYQKSAG*TLNVYCVGTIVISHVWLGDITAFAETIG  13112

Range 9: 13155 to 13265 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.4 bits(167) 0.0 37/37(100%) 0/37(0%) Minus/Plus
Query        2  LIV*LLR*EV*STMQITLALYTILRRTKTRLPGLLYH  112
                LIV*LLR*EV*STMQITLALYTILRRTKTRLPGLLYH
Subject  13155  LIV*LLR*EV*STMQITLALYTILRRTKTRLPGLLYH  13265

Grapevine leafroll associated virus 3 isolate TC BR, complete genome

Sequence ID: KX756668.1 Length: 18498 Number of Matches: 9

Range 1: 12739 to 13746 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
775.9 bits(1687) 0.0 329/336(98%) 0/336(0%) Minus/Plus
Query        3  LGIQEGKYVDVTQNLESTIVPLRVMEIKKRRVSAHVALPKVVSAYVDLYTNLQELLSDEVTKARTDTVSAYAADSMAFLVKMLPLTAREQWLRDMLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIKSFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYRLRLTPVAALIIMLIYYSVYGTNATRIKRRPDFLNVRIRGKVEKVSLRGVEDRAYRISEKRGINAQRILCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRSMINHADHASIIHYIKTNENQVTGTTLP  1010
                + +Q GKYVDVTQNLESTIVPLRVMEIKKRRVSAHVALPKVVSAYVDLYTNLQELLSDEVTKARTDTVSAYA DSMAFLVKMLPLTAREQWLRDMLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIKSFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYRLRLTPVAALIIMLIYYSVYGTNATRIKRRPDFLNVRI+GKVEKVSLRGVEDRAYRISEKRGINAQRILCRYYSDLT LARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRSMINHADHASIIHYIKTNENQVTGTTLP
Subject  12739  VSVQVGKYVDVTQNLESTIVPLRVMEIKKRRVSAHVALPKVVSAYVDLYTNLQELLSDEVTKARTDTVSAYATDSMAFLVKMLPLTAREQWLRDMLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIKSFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYRLRLTPVAALIIMLIYYSVYGTNATRIKRRPDFLNVRIKGKVEKVSLRGVEDRAYRISEKRGINAQRILCRYYSDLTYLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRSMINHADHASIIHYIKTNENQVTGTTLP  13746

Range 2: 12747 to 13748 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
763.5 bits(1660) 0.0 332/334(99%) 0/334(0%) Minus/Plus
Query        1  SGGEVCGRNAEFRKYDRAVKSYGNKEEASIGARCFTEGGICIRRSLYELAGVAVR*SN*GQNRYSFGLRC*LYGFLS*DVAPDSP*AVVERHVRISASTKTTGKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTICAYRVLRPLSRAFILFL*VEL*DDDR*RGKDMPGDRREVGAPSNGGKL*VKINPSGGLNNYADLLLRLRHKRYQD*TTPRFPQCEDKRKSRESFVTGGRRSRL*NIRKARDKRSTYIV*VL**SHMSG*ATLRHSQKQLEDAELCRWYVGV*HG*LYNF*GEKYDQPCRSR*HYTLY*DERKPGYRDYSTT  1002
                SGGEVCGRNAEFRKYDRAVKSYGNKEEASIGARCFTEGGICIRRSLYELAGVAVR*SN*GQNRYSFGLR *LYGFLS*DVAPDSP*AVVERHVRISASTKTTGKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTICAYRVLRPLSRAFILFL*VEL*DDDR*RGKDMPGDRREVGAPSNGGKL*VKINPSGGLNNYADLLLRLRHKRYQD*TTPRFPQCEDKRKSRESFVTGGRRSRL*NIRKARDKRSTYIV*VL**SH+SG*ATLRHSQKQLEDAELCRWYVGV*HG*LYNF*GEKYDQPCRSR*HYTLY*DERKPGYRDYSTT
Subject  12747  SGGEVCGRNAEFRKYDRAVKSYGNKEEASIGARCFTEGGICIRRSLYELAGVAVR*SN*GQNRYSFGLRY*LYGFLS*DVAPDSP*AVVERHVRISASTKTTGKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTICAYRVLRPLSRAFILFL*VEL*DDDR*RGKDMPGDRREVGAPSNGGKL*VKINPSGGLNNYADLLLRLRHKRYQD*TTPRFPQCEDKRKSRESFVTGGRRSRL*NIRKARDKRSTYIV*VL**SHISG*ATLRHSQKQLEDAELCRWYVGV*HG*LYNF*GEKYDQPCRSR*HYTLY*DERKPGYRDYSTT  13748

Range 3: 12746 to 13747 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
761.2 bits(1655) 0.0 333/334(100%) 0/334(0%) Plus/Minus
Query        2  VVE*SR*PGFRSS*YSV*C*RDLHG*SYFSP*KLYNQPCHTPTYHLHNSASSNCFCECRNVA*PDM*DHYSTYTIYVERLSRAFLIFYRRDLLPPVTKLSRLFLLSSH*GNLGVV*SW*RLCRKRSSKSA*LLRPPLGLILTYNFPPLDGAPTSRRSPGISFPLYLSSSHNST*RNRMKARERGRRTL*AHMVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLPVVFVLADILTCLSTTAHGLSGATS*LRKP*SQQRRPKLYRFWP*LLHLTATPASSYKDLRMQIPPSVKQRAPILASSLFP*LLTARSYFLNSALRPHTSPPE  1003
                VVE*SR*PGFRSS*YSV*C*RDLHG*SYFSP*KLYNQPCHTPTYHLHNSASSNCFCECRNVA*PDM*DHYSTYTIYVERLSRAFLIFYRRDLLPPVTKLSRLFLLSSH*GNLGVV*SW*RLCRKRSSKSA*LLRPPLGLILTYNFPPLDGAPTSRRSPGISFPLYLSSSHNST*RNRMKARERGRRTL*AHMVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLPVVFVLADILTCLSTTAHGLSGATS*LRKP*SQ RRPKLYRFWP*LLHLTATPASSYKDLRMQIPPSVKQRAPILASSLFP*LLTARSYFLNSALRPHTSPPE
Subject  12746  VVE*SR*PGFRSS*YSV*C*RDLHG*SYFSP*KLYNQPCHTPTYHLHNSASSNCFCECRNVA*PDM*DHYSTYTIYVERLSRAFLIFYRRDLLPPVTKLSRLFLLSSH*GNLGVV*SW*RLCRKRSSKSA*LLRPPLGLILTYNFPPLDGAPTSRRSPGISFPLYLSSSHNST*RNRMKARERGRRTL*AHMVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLPVVFVLADILTCLSTTAHGLSGATS*LRKP*SQ*RRPKLYRFWP*LLHLTATPASSYKDLRMQIPPSVKQRAPILASSLFP*LLTARSYFLNSALRPHTSPPE  13747

Range 4: 13051 to 13746 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
551.8 bits(1198) 0.0 230/232(99%) 0/232(0%) Plus/Minus
Query        3  W*SSPGNLVFVRLNIVYNASVICMVDHTSHLRSYTISRVIRQRTIYITQRLPIVSANAVMSPSQTCEITIVPTQYTLSVYPALF*YSIGAIFYPP*RNFLDFSSYPHIEEIWASFNPGSVCAVNGVVNQHNY*GRHWG*S*PIIFLH*TAHQLLGDLRAYLSPFTCRHLITQPREIG*KLVKGVEGLYRHIWF*VFNTPGCVLVEKRFYDQLERSDHVIYPSYSYVVGKICR  698
                W*SSPGNLVFVRLNIVYNASVICMVDHTSHLRSYTISRVIRQRTIYITQRLPIVSANAVMSPSQ CEITIVPTQYTLSVYPALF*YSIGAIFYPP*RNFLDFS YPHIEEIWASFNPGSVCAVNGVVNQHNY*GRHWG*S*PIIFLH*TAHQLLGDLRAYLSPFTCRHLITQPREIG*KLVKGVEGLYRHIWF*VFNTPGCVLVEKRFYDQLERSDHVIYPSYSYVVGKICR
Subject  13051  W*SSPGNLVFVRLNIVYNASVICMVDHTSHLRSYTISRVIRQRTIYITQRLPIVSANAVMSPSQICEITIVPTQYTLSVYPALF*YSIGAIFYPP*RNFLDFSFYPHIEEIWASFNPGSVCAVNGVVNQHNY*GRHWG*S*PIIFLH*TAHQLLGDLRAYLSPFTCRHLITQPREIG*KLVKGVEGLYRHIWF*VFNTPGCVLVEKRFYDQLERSDHVIYPSYSYVVGKICR  13746

Range 5: 12745 to 13014 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
210.0 bits(452) 0.0 89/90(99%) 0/90(0%) Plus/Minus
Query      735  QPLLTGCQGQHLN*ESHRVSSVGRNCIGSGLSYFI*QQLLQVRIKIYVCRYHLR*SNVRRYSPLLYFHNS*RHDRTF*ILRYVHILPLLN  1004
                QPLLTGCQGQHLN*ESHRVSSVGRNCIGSGLSYFI*QQLLQVRIKIYVCRYHLR*SNVRRYSPLLYFHNS*RHDRTF*ILRYVHILP LN
Subject  12745  QPLLTGCQGQHLN*ESHRVSSVGRNCIGSGLSYFI*QQLLQVRIKIYVCRYHLR*SNVRRYSPLLYFHNS*RHDRTF*ILRYVHILPHLN  13014

Range 6: 13227 to 13748 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
373.6 bits(809) 0.0 172/174(99%) 0/174(0%) Plus/Minus
Query        1  CGRVVPVTWFSFVLI*CIMLA*SAWLIILLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNIR*AFIPRFSDIL*ARSSTPRNETFSTFPLILTLRKSGRRLILVAFVP*TE**ISIIIKAATGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVIS*LNL  522
                CGRVVPVTWFSFVLI*CIMLA*SAWLIILLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLAR+VRSL*YLHNIR*AFIPRFSDIL*ARSSTPRNETFSTFP ILTLRKSGRRLILVAFVP*TE**ISIIIKAATGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVIS*LNL
Subject  13227  CGRVVPVTWFSFVLI*CIMLA*SAWLIILLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARYVRSL*YLHNIR*AFIPRFSDIL*ARSSTPRNETFSTFPFILTLRKSGRRLILVAFVP*TE**ISIIIKAATGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVIS*LNL  13748

Range 7: 12747 to 13184 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
327.3 bits(708) 0.0 144/146(99%) 0/146(0%) Plus/Minus
Query      565  IGTYGFKSLIPPGVSLLKNDFMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPNMSLNHCSRAVRGNILTKKAIESAA*AETVSVLALVTSSDSNSCKFV*RSTYADTTFGKATCADTRLFFISITLNGTIVLSKFCVTSTYFPS*  1002
                IGTYGFKSLIPPGVSLLKNDFMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPNMSLNHCSRAVRGNILTKKAIES A*AETVSVLALVTSSDSNSCKFV*RSTYADTTFGKATCADTRLFFISITLNGTIVLSKFCVTSTYFP+*
Subject  12747  IGTYGFKSLIPPGVSLLKNDFMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPNMSLNHCSRAVRGNILTKKAIESVA*AETVSVLALVTSSDSNSCKFV*RSTYADTTFGKATCADTRLFFISITLNGTIVLSKFCVTSTYFPT*  13184

Range 8: 12746 to 13594 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
613.7 bits(1333) 0.0 280/283(99%) 0/283(0%) Minus/Plus
Query      155  FRRGSMWT*RRI*KVRSCR*ELWK*RRGEXXXXXXXXXXXLHT*IFIRTCRSCCQMK*LRPEPIQFRPTLLTLWLS*LRCCP*QPVSSG*ETC*DIC*YEDDRQIFPTT*E*LGYMT*SLRSSWS*NRFSTRTHPGVLKT*NHMCL*SPSTPFTSFHPISLG*VMR*RQVKGERYARRSPRSWCAV*WRKIIG*D*PQWRP**LC*FTTPFTAQTLPGLNDAQISSM*G*EEKSRKFRYGG*KIAPIEYQKSAG*TLNVYCVGTIVISHVWLGDITAFAETIG  1003
                FR GSMWT*RRI*KVRSCR*ELWK*RRGEYRRTLLYRRWYLHT*IFIRTCRSCCQMK*LRPEPIQFRPTLLTLWLS*LRCCP*QPVSSG*ETC*DIC*YEDDRQIFPTT*E*LGYMT*SLRSSWS*NRFSTRTHPGVLKT*NHMCL*SPSTPFTSFHPISLG*VMR*RQVKGERYARRSPRSWCAV*WRKIIG*D*PQWRP**LC*FTTPFTAQTLPGLNDAQISSM*G*+EKSRKFRYGG*KIAPIEYQKSAG*TLNVYCVGTIVISH+WLGDITAFAETIG
Subject  12746  FRWGSMWT*RRI*KVRSCR*ELWK*RRGEYRRTLLYRRWYLHT*IFIRTCRSCCQMK*LRPEPIQFRPTLLTLWLS*LRCCP*QPVSSG*ETC*DIC*YEDDRQIFPTT*E*LGYMT*SLRSSWS*NRFSTRTHPGVLKT*NHMCL*SPSTPFTSFHPISLG*VMR*RQVKGERYARRSPRSWCAV*WRKIIG*D*PQWRP**LC*FTTPFTAQTLPGLNDAQISSM*G*KEKSRKFRYGG*KIAPIEYQKSAG*TLNVYCVGTIVISHIWLGDITAFAETIG  13594

Range 9: 13637 to 13747 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.4 bits(167) 0.0 37/37(100%) 0/37(0%) Minus/Plus
Query        2  LIV*LLR*EV*STMQITLALYTILRRTKTRLPGLLYH  112
                LIV*LLR*EV*STMQITLALYTILRRTKTRLPGLLYH
Subject  13637  LIV*LLR*EV*STMQITLALYTILRRTKTRLPGLLYH  13747

Grapevine leafroll associated virus 3 isolate GP18, complete genome

Sequence ID: EU259806.1 Length: 18498 Number of Matches: 9

Range 1: 12739 to 13746 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
772.7 bits(1680) 0.0 328/336(98%) 0/336(0%) Minus/Plus
Query        3  LGIQEGKYVDVTQNLESTIVPLRVMEIKKRRVSAHVALPKVVSAYVDLYTNLQELLSDEVTKARTDTVSAYAADSMAFLVKMLPLTAREQWLRDMLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIKSFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYRLRLTPVAALIIMLIYYSVYGTNATRIKRRPDFLNVRIRGKVEKVSLRGVEDRAYRISEKRGINAQRILCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRSMINHADHASIIHYIKTNENQVTGTTLP  1010
                + +Q GKYVDVTQNLESTIVPLRVMEIKKRRVSAHVALPKVVSAYVDLYTNLQELLSDEVTKARTDTVSAYA  SMAFLVKMLPLTAREQWLRDMLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIKSFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYRLRLTPVAALIIMLIYYSVYGTNATRIKRRPDFLNVRI+GKVEKVSLRGVEDRAYRISEKRGINAQRILCRYYSDLT LARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRSMINHADHASIIHYIKTNENQVTGTTLP
Subject  12739  VSVQVGKYVDVTQNLESTIVPLRVMEIKKRRVSAHVALPKVVSAYVDLYTNLQELLSDEVTKARTDTVSAYATGSMAFLVKMLPLTAREQWLRDMLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIKSFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYRLRLTPVAALIIMLIYYSVYGTNATRIKRRPDFLNVRIKGKVEKVSLRGVEDRAYRISEKRGINAQRILCRYYSDLTYLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRSMINHADHASIIHYIKTNENQVTGTTLP  13746

Range 2: 12747 to 13748 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
761.2 bits(1655) 0.0 331/334(99%) 0/334(0%) Minus/Plus
Query        1  SGGEVCGRNAEFRKYDRAVKSYGNKEEASIGARCFTEGGICIRRSLYELAGVAVR*SN*GQNRYSFGLRC*LYGFLS*DVAPDSP*AVVERHVRISASTKTTGKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTICAYRVLRPLSRAFILFL*VEL*DDDR*RGKDMPGDRREVGAPSNGGKL*VKINPSGGLNNYADLLLRLRHKRYQD*TTPRFPQCEDKRKSRESFVTGGRRSRL*NIRKARDKRSTYIV*VL**SHMSG*ATLRHSQKQLEDAELCRWYVGV*HG*LYNF*GEKYDQPCRSR*HYTLY*DERKPGYRDYSTT  1002
                SGGEVCGRNAEFRKYDRAVKSYGNKEEASIGARCFTEGGICIRRSLYELAGVAVR*SN*GQNRYSFGLR  LYGFLS*DVAPDSP*AVVERHVRISASTKTTGKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTICAYRVLRPLSRAFILFL*VEL*DDDR*RGKDMPGDRREVGAPSNGGKL*VKINPSGGLNNYADLLLRLRHKRYQD*TTPRFPQCEDKRKSRESFVTGGRRSRL*NIRKARDKRSTYIV*VL**SH+SG*ATLRHSQKQLEDAELCRWYVGV*HG*LYNF*GEKYDQPCRSR*HYTLY*DERKPGYRDYSTT
Subject  12747  SGGEVCGRNAEFRKYDRAVKSYGNKEEASIGARCFTEGGICIRRSLYELAGVAVR*SN*GQNRYSFGLRYWLYGFLS*DVAPDSP*AVVERHVRISASTKTTGKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTICAYRVLRPLSRAFILFL*VEL*DDDR*RGKDMPGDRREVGAPSNGGKL*VKINPSGGLNNYADLLLRLRHKRYQD*TTPRFPQCEDKRKSRESFVTGGRRSRL*NIRKARDKRSTYIV*VL**SHISG*ATLRHSQKQLEDAELCRWYVGV*HG*LYNF*GEKYDQPCRSR*HYTLY*DERKPGYRDYSTT  13748

Range 3: 12746 to 13747 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
758.9 bits(1650) 0.0 332/334(99%) 0/334(0%) Plus/Minus
Query        2  VVE*SR*PGFRSS*YSV*C*RDLHG*SYFSP*KLYNQPCHTPTYHLHNSASSNCFCECRNVA*PDM*DHYSTYTIYVERLSRAFLIFYRRDLLPPVTKLSRLFLLSSH*GNLGVV*SW*RLCRKRSSKSA*LLRPPLGLILTYNFPPLDGAPTSRRSPGISFPLYLSSSHNST*RNRMKARERGRRTL*AHMVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLPVVFVLADILTCLSTTAHGLSGATS*LRKP*SQQRRPKLYRFWP*LLHLTATPASSYKDLRMQIPPSVKQRAPILASSLFP*LLTARSYFLNSALRPHTSPPE  1003
                VVE*SR*PGFRSS*YSV*C*RDLHG*SYFSP*KLYNQPCHTPTYHLHNSASSNCFCECR+VA*PDM*DHYSTYTIYVERLSRAFLIFYRRDLLPPVTKLSRLFLLSSH*GNLGVV*SW*RLCRKRSSKSA*LLRPPLGLILTYNFPPLDGAPTSRRSPGISFPLYLSSSHNST*RNRMKARERGRRTL*AHMVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLPVVFVLADILTCLSTTAHGLSGATS*LRKP*SQ RRPKLYRFWP*LLHLTATPASSYKDLRMQIPPSVKQRAPILASSLFP*LLTARSYFLNSALRPHTSPPE
Subject  12746  VVE*SR*PGFRSS*YSV*C*RDLHG*SYFSP*KLYNQPCHTPTYHLHNSASSNCFCECRSVA*PDM*DHYSTYTIYVERLSRAFLIFYRRDLLPPVTKLSRLFLLSSH*GNLGVV*SW*RLCRKRSSKSA*LLRPPLGLILTYNFPPLDGAPTSRRSPGISFPLYLSSSHNST*RNRMKARERGRRTL*AHMVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLPVVFVLADILTCLSTTAHGLSGATS*LRKP*SQ*RRPKLYRFWP*LLHLTATPASSYKDLRMQIPPSVKQRAPILASSLFP*LLTARSYFLNSALRPHTSPPE  13747

Range 4: 13051 to 13746 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
550.0 bits(1194) 0.0 229/232(99%) 0/232(0%) Plus/Minus
Query        3  W*SSPGNLVFVRLNIVYNASVICMVDHTSHLRSYTISRVIRQRTIYITQRLPIVSANAVMSPSQTCEITIVPTQYTLSVYPALF*YSIGAIFYPP*RNFLDFSSYPHIEEIWASFNPGSVCAVNGVVNQHNY*GRHWG*S*PIIFLH*TAHQLLGDLRAYLSPFTCRHLITQPREIG*KLVKGVEGLYRHIWF*VFNTPGCVLVEKRFYDQLERSDHVIYPSYSYVVGKICR  698
                W*SSPGNLVFVRLNIVYNASVICMVDHTSHLRSYTISRVIRQRTIYITQRLPIVSANAV+SPSQ CEITIVPTQYTLSVYPALF*YSIGAIFYPP*RNFLDFS YPHIEEIWASFNPGSVCAVNGVVNQHNY*GRHWG*S*PIIFLH*TAHQLLGDLRAYLSPFTCRHLITQPREIG*KLVKGVEGLYRHIWF*VFNTPGCVLVEKRFYDQLERSDHVIYPSYSYVVGKICR
Subject  13051  W*SSPGNLVFVRLNIVYNASVICMVDHTSHLRSYTISRVIRQRTIYITQRLPIVSANAVVSPSQICEITIVPTQYTLSVYPALF*YSIGAIFYPP*RNFLDFSFYPHIEEIWASFNPGSVCAVNGVVNQHNY*GRHWG*S*PIIFLH*TAHQLLGDLRAYLSPFTCRHLITQPREIG*KLVKGVEGLYRHIWF*VFNTPGCVLVEKRFYDQLERSDHVIYPSYSYVVGKICR  13746

Range 5: 12745 to 13014 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
208.2 bits(448) 0.0 88/90(98%) 0/90(0%) Plus/Minus
Query      735  QPLLTGCQGQHLN*ESHRVSSVGRNCIGSGLSYFI*QQLLQVRIKIYVCRYHLR*SNVRRYSPLLYFHNS*RHDRTF*ILRYVHILPLLN  1004
                QPLLTGCQGQHLN*ESHR SSVGRNCIGSGLSYFI*QQLLQVRIKIYVCRYHLR*SNVRRYSPLLYFHNS*RHDRTF*ILRYVHILP LN
Subject  12745  QPLLTGCQGQHLN*ESHRASSVGRNCIGSGLSYFI*QQLLQVRIKIYVCRYHLR*SNVRRYSPLLYFHNS*RHDRTF*ILRYVHILPHLN  13014

Range 6: 13227 to 13748 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
373.6 bits(809) 0.0 172/174(99%) 0/174(0%) Plus/Minus
Query        1  CGRVVPVTWFSFVLI*CIMLA*SAWLIILLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNIR*AFIPRFSDIL*ARSSTPRNETFSTFPLILTLRKSGRRLILVAFVP*TE**ISIIIKAATGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVIS*LNL  522
                CGRVVPVTWFSFVLI*CIMLA*SAWLIILLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLAR+VRSL*YLHNIR*AFIPRFSDIL*ARSSTPRNETFSTFP ILTLRKSGRRLILVAFVP*TE**ISIIIKAATGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVIS*LNL
Subject  13227  CGRVVPVTWFSFVLI*CIMLA*SAWLIILLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARYVRSL*YLHNIR*AFIPRFSDIL*ARSSTPRNETFSTFPFILTLRKSGRRLILVAFVP*TE**ISIIIKAATGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVIS*LNL  13748

Range 7: 12747 to 13184 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
325.0 bits(703) 0.0 143/146(98%) 0/146(0%) Plus/Minus
Query      565  IGTYGFKSLIPPGVSLLKNDFMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPNMSLNHCSRAVRGNILTKKAIESAA*AETVSVLALVTSSDSNSCKFV*RSTYADTTFGKATCADTRLFFISITLNGTIVLSKFCVTSTYFPS*  1002
                IGTYGFKSLIPPGVSLLKNDFMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPNMSLNHCSRAVRGNILTKKAIE  A*AETVSVLALVTSSDSNSCKFV*RSTYADTTFGKATCADTRLFFISITLNGTIVLSKFCVTSTYFP+*
Subject  12747  IGTYGFKSLIPPGVSLLKNDFMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPNMSLNHCSRAVRGNILTKKAIEPVA*AETVSVLALVTSSDSNSCKFV*RSTYADTTFGKATCADTRLFFISITLNGTIVLSKFCVTSTYFPT*  13184

Range 8: 12746 to 13594 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
609.1 bits(1323) 0.0 278/283(98%) 0/283(0%) Minus/Plus
Query      155  FRRGSMWT*RRI*KVRSCR*ELWK*RRGEXXXXXXXXXXXLHT*IFIRTCRSCCQMK*LRPEPIQFRPTLLTLWLS*LRCCP*QPVSSG*ETC*DIC*YEDDRQIFPTT*E*LGYMT*SLRSSWS*NRFSTRTHPGVLKT*NHMCL*SPSTPFTSFHPISLG*VMR*RQVKGERYARRSPRSWCAV*WRKIIG*D*PQWRP**LC*FTTPFTAQTLPGLNDAQISSM*G*EEKSRKFRYGG*KIAPIEYQKSAG*TLNVYCVGTIVISHVWLGDITAFAETIG  1003
                FR GSMWT*RRI*KVRSCR*ELWK*RRGEYRRTLLYRRWYLHT*IFIRTCRSCCQMK*LRPEPIQFRPTLL LWLS*LRCCP*QPVSSG*ETC*DIC*YEDDRQIFPTT*E*LGYMT*SLRSSWS*NRFSTRTHPGVLKT*NHMCL*SPSTPFTSFHPISLG*VMR*RQVKGERYARRSPRSWCAV*WRKIIG*D*PQWRP**LC*FTTPFTAQTLPGLNDAQISSM*G*+EKSRKFRYGG*KIAPIEYQKSAG*TLNVYCVGTIVISH+WLGD TAFAETIG
Subject  12746  FRWGSMWT*RRI*KVRSCR*ELWK*RRGEYRRTLLYRRWYLHT*IFIRTCRSCCQMK*LRPEPIQFRPTLLALWLS*LRCCP*QPVSSG*ETC*DIC*YEDDRQIFPTT*E*LGYMT*SLRSSWS*NRFSTRTHPGVLKT*NHMCL*SPSTPFTSFHPISLG*VMR*RQVKGERYARRSPRSWCAV*WRKIIG*D*PQWRP**LC*FTTPFTAQTLPGLNDAQISSM*G*KEKSRKFRYGG*KIAPIEYQKSAG*TLNVYCVGTIVISHIWLGDTTAFAETIG  13594

Range 9: 13637 to 13747 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.4 bits(167) 0.0 37/37(100%) 0/37(0%) Minus/Plus
Query        2  LIV*LLR*EV*STMQITLALYTILRRTKTRLPGLLYH  112
                LIV*LLR*EV*STMQITLALYTILRRTKTRLPGLLYH
Subject  13637  LIV*LLR*EV*STMQITLALYTILRRTKTRLPGLLYH  13747

Grapevine leafroll associated virus 3 isolate 3138 07, complete genome

Sequence ID: JX559645.1 Length: 18498 Number of Matches: 9

Range 1: 12739 to 13746 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
745.7 bits(1621) 0.0 310/336(92%) 0/336(0%) Minus/Plus
Query        3  LGIQEGKYVDVTQNLESTIVPLRVMEIKKRRVSAHVALPKVVSAYVDLYTNLQELLSDEVTKARTDTVSAYAADSMAFLVKMLPLTAREQWLRDMLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIKSFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYRLRLTPVAALIIMLIYYSVYGTNATRIKRRPDFLNVRIRGKVEKVSLRGVEDRAYRISEKRGINAQRILCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRSMINHADHASIIHYIKTNENQVTGTTLP  1010
                + +Q GKYVDVTQNLESTIVPL+VMEIKKRR SAHV+LPKVVSAYVD YTNLQELLSDEVT+ARTDTVSAYA DSMAFLVKMLPLTAREQWL+D+LGYLLVRRRPANFSYDIRVAWVYDVIATLKLVI+ FFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENY+LRLTPV ALII+L+YYS+YGTNATRIKRRPDFLNVRI+G+VEKVSLRGVEDRA+RISEKRGINAQR+LCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVR+ IN ADHASIIHYIKTNENQVTGTTLP
Subject  12739  VSVQVGKYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGRVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNENQVTGTTLP  13746

Range 2: 12747 to 13748 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
638.4 bits(1387) 0.0 284/334(85%) 0/334(0%) Minus/Plus
Query        1  SGGEVCGRNAEFRKYDRAVKSYGNKEEASIGARCFTEGGICIRRSLYELAGVAVR*SN*GQNRYSFGLRC*LYGFLS*DVAPDSP*AVVERHVRISASTKTTGKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTICAYRVLRPLSRAFILFL*VEL*DDDR*RGKDMPGDRREVGAPSNGGKL*VKINPSGGLNNYADLLLRLRHKRYQD*TTPRFPQCEDKRKSRESFVTGGRRSRL*NIRKARDKRSTYIV*VL**SHMSG*ATLRHSQKQLEDAELCRWYVGV*HG*LYNF*GEKYDQPCRSR*HYTLY*DERKPGYRDYSTT  1002
                SG EVCGRNAEFRKYDRAVKSYGNKE+  I    FTEGGI +RR LYELAG+AV *SN*GQNRYSFG+R  LYGFLS*DV PD  *AVV+R  RISAST+TT KFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKT+CAYRV+RPLSRAF+LFL*V+L DDDR*RGKDMPGDRREVGAPSNGGKL*VKI+PS GLNNY  +LL LRHKRYQD* TP FPQCEDK KSRE FVTGGRRS L*NIRKARDKRST I+*VL* SHMSG*ATLRHSQ+QLEDAELCR YV V*HG*LYNF*GEKYDQ  RSR*HYTLY DERKPGYR+YSTT
Subject  12747  SGREVCGRNAEFRKYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTVCAYRVIRPLSRAFVLFL*VKLRDDDR*RGKDMPGDRREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRRYVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERKPGYRNYSTT  13748

Range 3: 13227 to 13748 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
347.5 bits(752) 0.0 162/174(93%) 0/174(0%) Plus/Minus
Query        1  CGRVVPVTWFSFVLI*CIMLA*SAWLIILLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNIR*AFIPRFSDIL*ARSSTPRNETFSTFPLILTLRKSGRRLILVAFVP*TE**ISIIIKAATGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVIS*LNL  522
                CGRVVPVTWFSFVLI*CIMLA*SA LI+ LTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHN R*AFIPRFSDIL ARSSTPRNETFST P ILTLRKSGR LILVAFVP* E*  SIIIKA TGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVIS*LNL
Subject  13227  CGRVVPVTWFSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTLPFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVIS*LNL  13748

Range 4: 12747 to 13184 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
299.8 bits(648) 0.0 133/146(91%) 0/146(0%) Plus/Minus
Query      565  IGTYGFKSLIPPGVSLLKNDFMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPNMSLNHCSRAVRGNILTKKAIESAA*AETVSVLALVTSSDSNSCKFV*RSTYADTTFGKATCADTRLFFISITLNGTIVLSKFCVTSTYFPS*  1002
                IGTYGFKSLIPPGVSLLKN+ MTSLSVAITSYTQATLMS*EKFAGRLRTSRYP+ S NHCSRAVRGNILTKKAIES A AETVSVLALVTSSDSNSCKFV*+ST ADTTFGK TCAD RLFFISIT NGTIVLSKFCVTSTYFP+*
Subject  12747  IGTYGFKSLIPPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYFPT*  13184

Range 5: 12746 to 13747 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
607.3 bits(1319) 0.0 283/334(85%) 0/334(0%) Plus/Minus
Query        2  VVE*SR*PGFRSS*YSV*C*RDLHG*SYFSP*KLYNQPCHTPTYHLHNSASSNCFCECRNVA*PDM*DHYSTYTIYVERLSRAFLIFYRRDLLPPVTKLSRLFLLSSH*GNLGVV*SW*RLCRKRSSKSA*LLRPPLGLILTYNFPPLDGAPTSRRSPGISFPLYLSSSHNST*RNRMKARERGRRTL*AHMVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLPVVFVLADILTCLSTTAHGLSGATS*LRKP*SQQRRPKLYRFWP*LLHLTATPASSYKDLRMQIPPSVKQRAPILASSLFP*LLTARSYFLNSALRPHTSPPE  1003
                VVE* R*PGFRSS*YSV*C*RDL  *SYFSP*KLYNQPCHT TY LHNSASSNC CECRNVA*PDM*D YSTY I+VERLSRAFLIF R DLLPPVTK SRLF LSSH*GN GV *SW*RLCRK SS   *LLRP LG ILTY+FPPLDGAPTSRRSPGISFPLYLSSS N T*RNR KARERGR TL*AH VLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNL VV VLADIL  L TTAH  SG TS*LRKP*S+ R PKLYRFWP*LLH TA PASSYK+LR +IPPSV     IL  SLFP*LLTARSYFLNSALRPHTS PE
Subject  12746  VVE*FR*PGFRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTYRLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTSRRSPGISFPLYLSSSRNLT*RNRTKARERGRMTL*AHTVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYFLNSALRPHTSLPE  13747

Range 6: 13054 to 13746 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
465.7 bits(1010) 0.0 202/231(87%) 0/231(0%) Plus/Minus
Query        3  W*SSPGNLVFVRLNIVYNASVICMVDHTSHLRSYTISRVIRQRTIYITQRLPIVSANAVMSPSQTCEITIVPTQYTLSVYPALF*YSIGAIFYPP*RNFLDFSSYPHIEEIWASFNPGSVCAVNGVVNQHNY*GRHWG*S*PIIFLH*TAHQLLGDLRAYLSPFTCRHLITQPREIG*KLVKGVEGLYRHIWF*VFNTPGCVLVEKRFYDQLERSDHVIYPSYSYVVGKIC  695
                W*SS GNLVFVRL+IVYNASVIC VD  SHLRSYTISRVIR RT+YITQRLPIV ANAVMSPSQTCEI IVPT YTLSVYPALF*YS G IFYPP*RN LD S YPHIEEI ASFNPGSVCAVNGVV Q+NY*G HWG S* I+FLH*TAHQLLGDLRAYLSPFTCRHL+T PREIG KLVKGVE LYRHI F*VFNTPGCVLVEK+ YDQLERSDHVIYPSYSYVVGKIC
Subject  13054  W*SSSGNLVFVRLDIVYNASVICGVDRISHLRSYTISRVIR*RTVYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLDSSLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLLGDLRAYLSPFTCRHLVT*PREIGRKLVKGVE*LYRHIRF*VFNTPGCVLVEKQSYDQLERSDHVIYPSYSYVVGKIC  13746

Range 7: 12745 to 13011 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
153.2 bits(328) 0.0 70/89(79%) 0/89(0%) Plus/Minus
Query      738  PLLTGCQGQHLN*ESHRVSSVGRNCIGSGLSYFI*QQLLQVRIKIYVCRYHLR*SNVRRYSPLLYFHNS*RHDRTF*ILRYVHILPLLN  1004
                PLLT  QG HLN*ESHRV SV RNCIGSG SYFI QQ LQVRIKIYV  YHLR*+N+   S  LYFHN *RHDRTF*ILRYVHILP LN
Subject  12745  PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPYLN  13011

Range 8: 12746 to 13594 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
503.3 bits(1092) 0.0 238/283(84%) 0/283(0%) Minus/Plus
Query      155  FRRGSMWT*RRI*KVRSCR*ELWK*RRGEXXXXXXXXXXXLHT*IFIRTCRSCCQMK*LRPEPIQFRPTLLTLWLS*LRCCP*QPVSSG*ETC*DIC*YEDDRQIFPTT*E*LGYMT*SLRSSWS*NRFSTRTHPGVLKT*NHMCL*SPSTPFTSFHPISLG*VMR*RQVKGERYARRSPRSWCAV*WRKIIG*D*PQWRP**LC*FTTPFTAQTLPGLNDAQISSM*G*EEKSRKFRYGG*KIAPIEYQKSAG*TLNVYCVGTIVISHVWLGDITAFAETIG  1003
                FR GSMWT*RRI*KVRSCR*+LWK*R+ E +  L+YRRWY  T*IFIRTCR+CC+MK*L PEPIQFR TL TLWLS*LRC P*  VSSG*+TC*DIC*Y DD+QIFPTT*E*LGYMT*SLRSSWS*+ FSTRTHPGVLKT*N MCL*S STPFTSF PISLG*V R*RQVKGERYARRSPRSWCAV*WRK I *D*PQ  P**L  +TTPFTAQTLPGL DA+ISSM*G* E+SR+FRYGG*KI P+EYQKSAG*TLNVY VGTI ISHVWLGDITAFA TIG
Subject  12746  FR*GSMWT*RRI*KVRSCR*KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTHPGVLKT*NRMCL*SHSTPFTSFRPISLG*VTR*RQVKGERYARRSPRSWCAV*WRKTIS*D*PQ*WP**LYWYTTPFTAQTLPGLKDARISSM*G*REESRRFRYGG*KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIG  13594

Range 9: 13637 to 13747 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.0 bits(140) 0.0 32/37(86%) 0/37(0%) Minus/Plus
Query        2  LIV*LLR*EV*STMQITLALYTILRRTKTRLPGLLYH  112
                LIV*LLR*E+ ST QITLALYTI RRTKTRLP LLYH
Subject  13637  LIV*LLR*EIRSTPQITLALYTISRRTKTRLPELLYH  13747

Nucleotide Sequence (425 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
43
86
129
172
215
258
301
344
387
425

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
331.0 1682.2 27% 5.122e-89 96% GQ352632.1
331.0 1682.2 27% 5.122e-89 96% KX756668.1
327.3 1660.7 27% 6.5e-88 93% KJ174518.1
325.0 1663.0 27% 3.181e-87 96% KX701860.1
319.5 1646.5 27% 1.438e-85 96% EU259806.1

Alignments

Grapevine leafroll associated virus 3 isolate 623, complete genome

Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 10

Range 1: 10845 to 11267 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
331.0 bits(716) 0.0 140/141(99%) 0/141(0%) Plus/Minus
Query        1  SSPKVENR***VFYSRLS*GIEGCGCRFVNNTSNRYTKTFQCLNNEASFKGVIISRYRYNCGCNRSRRIPFALQYQGSQE*THHVNDPQ*GVRSGT*TSD**GASAVYLYGVCGF*FLNVTFDVIPRHTYPPFRVNIQPSL  423
                SSPKVENR***VFYSRLS*GIEGCGCRFVNNTSNRYTKTFQCLNNEASFKGVIISRYRYNCGCNRSRRIPFALQYQGSQE*T+HVNDPQ*GVRSGT*TSD**GASAVYLYGVCGF*FLNVTFDVIPRHTYPPFRVNIQPSL
Subject  10845  SSPKVENR***VFYSRLS*GIEGCGCRFVNNTSNRYTKTFQCLNNEASFKGVIISRYRYNCGCNRSRRIPFALQYQGSQE*TYHVNDPQ*GVRSGT*TSD**GASAVYLYGVCGF*FLNVTFDVIPRHTYPPFRVNIQPSL  11267

Range 2: 10988 to 11266 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
215.1 bits(463) 0.0 92/93(99%) 0/93(0%) Minus/Plus
Query        2  TGHLIEGR*RDVFILESLDTGVRKVYVYYGYSRSCNGTG*L*LL*TKLRC*GTERSWYTG*RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR  280
                TGHLIEGR*RD+FILESLDTGVRKVYVYYGYSRSCNGTG*L*LL*TKLRC*GTERSWYTG*RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR
Subject  10988  TGHLIEGR*RDMFILESLDTGVRKVYVYYGYSRSCNGTG*L*LL*TKLRC*GTERSWYTG*RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR  11266

Range 3: 10844 to 10936 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
74.8 bits(157) 0.0 31/31(100%) 0/31(0%) Minus/Plus
Query      332  RGKVVC*PEKVGRCDEG*RRTLR*EIKTHIH  424
                RGKVVC*PEKVGRCDEG*RRTLR*EIKTHIH
Subject  10844  RGKVVC*PEKVGRCDEG*RRTLR*EIKTHIH  10936

Range 4: 10845 to 11267 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
267.7 bits(578) 0.0 140/141(99%) 0/141(0%) Minus/Plus
Query        1  EGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDXXXXXXXXXXXXGPDTLLRVVDVMCLFLRALILECERYTSXXXXXXXXXVPADYNSFKRSFVVEALKGLGIPVRGVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG  423
                EGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDV+CLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG
Subject  10845  EGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG  11267

Range 5: 10844 to 11266 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
260.0 bits(561) 0.0 141/141(100%) 0/141(0%) Plus/Minus
Query        2  PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTPLTGIPRPFSASTTKLRLKEL*SAGXXXXXXXXXXDVYLSHSSIKALKNKHITSTTLNKVSGXXXXXXXXXXXXLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPS  424
                PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPS
Subject  10844  PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPS  11266

Range 6: 10843 to 11064 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
158.7 bits(340) 0.0 73/74(99%) 0/74(0%) Minus/Plus
Query      204  *REGCMLTRKGG*V*RGITSNVTLRN*NPHTP*R*TAEAPY*SEV*VPDRTPY*GSLT*CVYS*EP*YWSAKGI  425
                *REGCMLTRKGG*V*RGITSNVTLRN*NPHTP*R*TAEAPY*SEV*VPDRTPY*GSLT* VYS*EP*YWSAKGI
Subject  10843  *REGCMLTRKGG*V*RGITSNVTLRN*NPHTP*R*TAEAPY*SEV*VPDRTPY*GSLT*YVYS*EP*YWSAKGI  11064

Range 7: 11107 to 11265 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
117.5 bits(250) 0.0 53/53(100%) 0/53(0%) Minus/Plus
Query        3  IITPLNEASLLRH*KVLVYRLEVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGE  161
                IITPLNEASLLRH*KVLVYRLEVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGE
Subject  11107  IITPLNEASLLRH*KVLVYRLEVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGE  11265

Range 8: 11107 to 11265 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
116.5 bits(248) 0.0 53/53(100%) 0/53(0%) Plus/Minus
Query        3  LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL*PVYQDLSVPQQRSFV*RSYN  161
                LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL*PVYQDLSVPQQRSFV*RSYN
Subject  11107  LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL*PVYQDLSVPQQRSFV*RSYN  11265

Range 9: 10843 to 10932 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.2 bits(160) 0.0 30/30(100%) 0/30(0%) Plus/Minus
Query      336  MWVLISQRNVRRYPSSHLPTFSG*HTTFPL  425
                MWVLISQRNVRRYPSSHLPTFSG*HTTFPL
Subject  10843  MWVLISQRNVRRYPSSHLPTFSG*HTTFPL  10932

Range 10: 10987 to 11070 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
64.8 bits(135) 0.0 27/28(96%) 0/28(0%) Plus/Minus
Query      198  *TYTFRTPVSRLSRINTSRQRPSIRCPV  281
                *TYTFRTPVSRLSRIN SRQRPSIRCPV
Subject  10987  *TYTFRTPVSRLSRINISRQRPSIRCPV  11070

Grapevine leafroll associated virus 3 isolate TC BR, complete genome

Sequence ID: KX756668.1 Length: 18498 Number of Matches: 10

Range 1: 10845 to 11267 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
331.0 bits(716) 0.0 140/141(99%) 0/141(0%) Plus/Minus
Query        1  SSPKVENR***VFYSRLS*GIEGCGCRFVNNTSNRYTKTFQCLNNEASFKGVIISRYRYNCGCNRSRRIPFALQYQGSQE*THHVNDPQ*GVRSGT*TSD**GASAVYLYGVCGF*FLNVTFDVIPRHTYPPFRVNIQPSL  423
                SSPKVENR***VFYSRLS*GIEGCGCRFVNNTSNRYTKTFQCLNNEASFKGVIISRYRYNCGCNRSRRIPFALQYQGSQE*T+HVNDPQ*GVRSGT*TSD**GASAVYLYGVCGF*FLNVTFDVIPRHTYPPFRVNIQPSL
Subject  10845  SSPKVENR***VFYSRLS*GIEGCGCRFVNNTSNRYTKTFQCLNNEASFKGVIISRYRYNCGCNRSRRIPFALQYQGSQE*TYHVNDPQ*GVRSGT*TSD**GASAVYLYGVCGF*FLNVTFDVIPRHTYPPFRVNIQPSL  11267

Range 2: 10988 to 11266 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
215.1 bits(463) 0.0 92/93(99%) 0/93(0%) Minus/Plus
Query        2  TGHLIEGR*RDVFILESLDTGVRKVYVYYGYSRSCNGTG*L*LL*TKLRC*GTERSWYTG*RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR  280
                TGHLIEGR*RD+FILESLDTGVRKVYVYYGYSRSCNGTG*L*LL*TKLRC*GTERSWYTG*RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR
Subject  10988  TGHLIEGR*RDMFILESLDTGVRKVYVYYGYSRSCNGTG*L*LL*TKLRC*GTERSWYTG*RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR  11266

Range 3: 10844 to 10936 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
74.8 bits(157) 0.0 31/31(100%) 0/31(0%) Minus/Plus
Query      332  RGKVVC*PEKVGRCDEG*RRTLR*EIKTHIH  424
                RGKVVC*PEKVGRCDEG*RRTLR*EIKTHIH
Subject  10844  RGKVVC*PEKVGRCDEG*RRTLR*EIKTHIH  10936

Range 4: 10845 to 11267 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
267.7 bits(578) 0.0 140/141(99%) 0/141(0%) Minus/Plus
Query        1  EGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDXXXXXXXXXXXXGPDTLLRVVDVMCLFLRALILECERYTSXXXXXXXXXVPADYNSFKRSFVVEALKGLGIPVRGVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG  423
                EGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDV+CLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG
Subject  10845  EGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG  11267

Range 5: 10844 to 11266 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
260.0 bits(561) 0.0 141/141(100%) 0/141(0%) Plus/Minus
Query        2  PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTPLTGIPRPFSASTTKLRLKEL*SAGXXXXXXXXXXDVYLSHSSIKALKNKHITSTTLNKVSGXXXXXXXXXXXXLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPS  424
                PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPS
Subject  10844  PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPS  11266

Range 6: 10843 to 11064 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
158.7 bits(340) 0.0 73/74(99%) 0/74(0%) Minus/Plus
Query      204  *REGCMLTRKGG*V*RGITSNVTLRN*NPHTP*R*TAEAPY*SEV*VPDRTPY*GSLT*CVYS*EP*YWSAKGI  425
                *REGCMLTRKGG*V*RGITSNVTLRN*NPHTP*R*TAEAPY*SEV*VPDRTPY*GSLT* VYS*EP*YWSAKGI
Subject  10843  *REGCMLTRKGG*V*RGITSNVTLRN*NPHTP*R*TAEAPY*SEV*VPDRTPY*GSLT*YVYS*EP*YWSAKGI  11064

Range 7: 11107 to 11265 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
117.5 bits(250) 0.0 53/53(100%) 0/53(0%) Minus/Plus
Query        3  IITPLNEASLLRH*KVLVYRLEVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGE  161
                IITPLNEASLLRH*KVLVYRLEVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGE
Subject  11107  IITPLNEASLLRH*KVLVYRLEVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGE  11265

Range 8: 11107 to 11265 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
116.5 bits(248) 0.0 53/53(100%) 0/53(0%) Plus/Minus
Query        3  LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL*PVYQDLSVPQQRSFV*RSYN  161
                LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL*PVYQDLSVPQQRSFV*RSYN
Subject  11107  LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL*PVYQDLSVPQQRSFV*RSYN  11265

Range 9: 10843 to 10932 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.2 bits(160) 0.0 30/30(100%) 0/30(0%) Plus/Minus
Query      336  MWVLISQRNVRRYPSSHLPTFSG*HTTFPL  425
                MWVLISQRNVRRYPSSHLPTFSG*HTTFPL
Subject  10843  MWVLISQRNVRRYPSSHLPTFSG*HTTFPL  10932

Range 10: 10987 to 11070 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
64.8 bits(135) 0.0 27/28(96%) 0/28(0%) Plus/Minus
Query      198  *TYTFRTPVSRLSRINTSRQRPSIRCPV  281
                *TYTFRTPVSRLSRIN SRQRPSIRCPV
Subject  10987  *TYTFRTPVSRLSRINISRQRPSIRCPV  11070

Grapevine leafroll associated virus 3, complete genome

Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 10

Range 1: 10848 to 11267 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
327.3 bits(708) 0.0 138/140(99%) 0/140(0%) Plus/Minus
Query        1  SSPKVENR***VFYSRLS*GIEGCGCRFVNNTSNRYTKTFQCLNNEASFKGVIISRYRYNCGCNRSRRIPFALQYQGSQE*THHVNDPQ*GVRSGT*TSD**GASAVYLYGVCGF*FLNVTFDVIPRHTYPPFRVNIQPS  420
                SSPKVENR***VFYSRLS*GIEGCGCRFVNNTSNRYTKTFQCLNNEASFKGVIISRYRYNCGCNRSRRIPF LQYQGSQE*T+HVNDPQ*GVRSGT*TSD**GASAVYLYGVCGF*FLNVTFDVIPRHTYPPFRVNIQPS
Subject  10848  SSPKVENR***VFYSRLS*GIEGCGCRFVNNTSNRYTKTFQCLNNEASFKGVIISRYRYNCGCNRSRRIPFTLQYQGSQE*TYHVNDPQ*GVRSGT*TSD**GASAVYLYGVCGF*FLNVTFDVIPRHTYPPFRVNIQPS  11267

Range 2: 10845 to 11267 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
267.7 bits(578) 0.0 140/141(99%) 0/141(0%) Minus/Plus
Query        1  EGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDXXXXXXXXXXXXGPDTLLRVVDVMCLFLRALILECERYTSXXXXXXXXXVPADYNSFKRSFVVEALKGLGIPVRGVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG  423
                EGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDV+CLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG
Subject  10845  EGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG  11267

Range 3: 10988 to 11266 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
210.9 bits(454) 0.0 91/93(98%) 0/93(0%) Minus/Plus
Query        2  TGHLIEGR*RDVFILESLDTGVRKVYVYYGYSRSCNGTG*L*LL*TKLRC*GTERSWYTG*RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR  280
                TGHLIEGR*RD+FILESLDTGV KVYVYYGYSRSCNGTG*L*LL*TKLRC*GTERSWYTG*RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR
Subject  10988  TGHLIEGR*RDMFILESLDTGV*KVYVYYGYSRSCNGTG*L*LL*TKLRC*GTERSWYTG*RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR  11266

Range 4: 10844 to 10936 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.2 bits(149) 0.0 30/31(97%) 0/31(0%) Minus/Plus
Query      332  RGKVVC*PEKVGRCDEG*RRTLR*EIKTHIH  424
                R KVVC*PEKVGRCDEG*RRTLR*EIKTHIH
Subject  10844  RRKVVC*PEKVGRCDEG*RRTLR*EIKTHIH  10936

Range 5: 10844 to 11266 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
260.0 bits(561) 0.0 141/141(100%) 0/141(0%) Plus/Minus
Query        2  PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTPLTGIPRPFSASTTKLRLKEL*SAGXXXXXXXXXXDVYLSHSSIKALKNKHITSTTLNKVSGXXXXXXXXXXXXLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPS  424
                PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPS
Subject  10844  PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPS  11266

Range 6: 10843 to 11064 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
155.5 bits(333) 0.0 71/74(96%) 0/74(0%) Minus/Plus
Query      204  *REGCMLTRKGG*V*RGITSNVTLRN*NPHTP*R*TAEAPY*SEV*VPDRTPY*GSLT*CVYS*EP*YWSAKGI  425
                *+EGCMLTRKGG*V*RGITSNVTLRN*NPHTP*R*TAEAPY*SEV*VPDRTPY*GSLT* VYS*EP*YWS KGI
Subject  10843  *KEGCMLTRKGG*V*RGITSNVTLRN*NPHTP*R*TAEAPY*SEV*VPDRTPY*GSLT*YVYS*EP*YWSVKGI  11064

Range 7: 11107 to 11265 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
117.5 bits(250) 0.0 53/53(100%) 0/53(0%) Minus/Plus
Query        3  IITPLNEASLLRH*KVLVYRLEVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGE  161
                IITPLNEASLLRH*KVLVYRLEVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGE
Subject  11107  IITPLNEASLLRH*KVLVYRLEVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGE  11265

Range 8: 11107 to 11265 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
116.5 bits(248) 0.0 53/53(100%) 0/53(0%) Plus/Minus
Query        3  LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL*PVYQDLSVPQQRSFV*RSYN  161
                LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL*PVYQDLSVPQQRSFV*RSYN
Subject  11107  LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL*PVYQDLSVPQQRSFV*RSYN  11265

Range 9: 10843 to 10932 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.6 bits(150) 0.0 29/30(97%) 0/30(0%) Plus/Minus
Query      336  MWVLISQRNVRRYPSSHLPTFSG*HTTFPL  425
                MWVLISQRNVRRYPSSHLPTFSG*HTTF L
Subject  10843  MWVLISQRNVRRYPSSHLPTFSG*HTTFLL  10932

Range 10: 10987 to 11070 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.5 bits(130) 0.0 26/28(93%) 0/28(0%) Plus/Minus
Query      198  *TYTFRTPVSRLSRINTSRQRPSIRCPV  281
                *TYTF TPVSRLSRIN SRQRPSIRCPV
Subject  10987  *TYTFHTPVSRLSRINISRQRPSIRCPV  11070

Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome

Sequence ID: KX701860.1 Length: 18020 Number of Matches: 10

Range 1: 10363 to 10785 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
325.0 bits(703) 0.0 138/141(98%) 0/141(0%) Plus/Minus
Query        1  SSPKVENR***VFYSRLS*GIEGCGCRFVNNTSNRYTKTFQCLNNEASFKGVIISRYRYNCGCNRSRRIPFALQYQGSQE*THHVNDPQ*GVRSGT*TSD**GASAVYLYGVCGF*FLNVTFDVIPRHTYPPFRVNIQPSL  423
                SSPKVENR***VFYSRLS*GIEGCGCRFVNNTSNRYTKTFQCLNNEASFKGVIISRYRY+CGCNRSRRIPFALQYQGSQE*T+HVNDPQ*GVRSGT*TSD**GASAVYLYGVCGF*FLNVT DVIPRHTYPPFRVNIQPSL
Subject  10363  SSPKVENR***VFYSRLS*GIEGCGCRFVNNTSNRYTKTFQCLNNEASFKGVIISRYRYDCGCNRSRRIPFALQYQGSQE*TYHVNDPQ*GVRSGT*TSD**GASAVYLYGVCGF*FLNVTSDVIPRHTYPPFRVNIQPSL  10785

Range 2: 10363 to 10785 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
264.5 bits(571) 0.0 139/141(99%) 0/141(0%) Minus/Plus
Query        1  EGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDXXXXXXXXXXXXGPDTLLRVVDVMCLFLRALILECERYTSXXXXXXXXXVPADYNSFKRSFVVEALKGLGIPVRGVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG  423
                EGRLYVNPKRWVGVTRDNV RYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDV+CLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG
Subject  10363  EGRLYVNPKRWVGVTRDNVGRYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG  10785

Range 3: 10506 to 10784 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
209.6 bits(451) 0.0 91/93(98%) 0/93(0%) Minus/Plus
Query        2  TGHLIEGR*RDVFILESLDTGVRKVYVYYGYSRSCNGTG*L*LL*TKLRC*GTERSWYTG*RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR  280
                TGHLIEGR*RD+FILESLDTGVRKVYVYYGYSRS NGTG*L*LL*TKLRC*GTERSWYTG*RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR
Subject  10506  TGHLIEGR*RDMFILESLDTGVRKVYVYYGYSRSRNGTG*L*LL*TKLRC*GTERSWYTG*RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR  10784

Range 4: 10362 to 10454 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
74.8 bits(157) 0.0 31/31(100%) 0/31(0%) Minus/Plus
Query      332  RGKVVC*PEKVGRCDEG*RRTLR*EIKTHIH  424
                RGKVVC*PEKVGRCDEG*RRTLR*EIKTHIH
Subject  10362  RGKVVC*PEKVGRCDEG*RRTLR*EIKTHIH  10454

Range 5: 10362 to 10784 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
257.7 bits(556) 0.0 140/141(99%) 0/141(0%) Plus/Minus
Query        2  PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTPLTGIPRPFSASTTKLRLKEL*SAGXXXXXXXXXXDVYLSHSSIKALKNKHITSTTLNKVSGXXXXXXXXXXXXLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPS  424
                PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*R TLSLVTPTHLFGLTYNLPS
Subject  10362  PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RPTLSLVTPTHLFGLTYNLPS  10784

Range 6: 10361 to 10582 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
156.4 bits(335) 0.0 72/74(97%) 0/74(0%) Minus/Plus
Query      204  *REGCMLTRKGG*V*RGITSNVTLRN*NPHTP*R*TAEAPY*SEV*VPDRTPY*GSLT*CVYS*EP*YWSAKGI  425
                *REGCMLTRKGG*V*RGITS+VTLRN*NPHTP*R*TAEAPY*SEV*VPDRTPY*GSLT* VYS*EP*YWSAKGI
Subject  10361  *REGCMLTRKGG*V*RGITSDVTLRN*NPHTP*R*TAEAPY*SEV*VPDRTPY*GSLT*YVYS*EP*YWSAKGI  10582

Range 7: 10625 to 10783 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
117.5 bits(250) 0.0 53/53(100%) 0/53(0%) Minus/Plus
Query        3  IITPLNEASLLRH*KVLVYRLEVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGE  161
                IITPLNEASLLRH*KVLVYRLEVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGE
Subject  10625  IITPLNEASLLRH*KVLVYRLEVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGE  10783

Range 8: 10625 to 10783 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
116.5 bits(248) 0.0 53/53(100%) 0/53(0%) Plus/Minus
Query        3  LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL*PVYQDLSVPQQRSFV*RSYN  161
                LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL*PVYQDLSVPQQRSFV*RSYN
Subject  10625  LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL*PVYQDLSVPQQRSFV*RSYN  10783

Range 9: 10361 to 10450 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.2 bits(160) 0.0 30/30(100%) 0/30(0%) Plus/Minus
Query      336  MWVLISQRNVRRYPSSHLPTFSG*HTTFPL  425
                MWVLISQRNVRRYPSSHLPTFSG*HTTFPL
Subject  10361  MWVLISQRNVRRYPSSHLPTFSG*HTTFPL  10450

Range 10: 10505 to 10588 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
64.8 bits(135) 0.0 27/28(96%) 0/28(0%) Plus/Minus
Query      198  *TYTFRTPVSRLSRINTSRQRPSIRCPV  281
                *TYTFRTPVSRLSRIN SRQRPSIRCPV
Subject  10505  *TYTFRTPVSRLSRINISRQRPSIRCPV  10588

Grapevine leafroll associated virus 3 isolate GP18, complete genome

Sequence ID: EU259806.1 Length: 18498 Number of Matches: 10

Range 1: 10845 to 11267 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
319.5 bits(691) 0.0 137/141(97%) 0/141(0%) Plus/Minus
Query        1  SSPKVENR***VFYSRLS*GIEGCGCRFVNNTSNRYTKTFQCLNNEASFKGVIISRYRYNCGCNRSRRIPFALQYQGSQE*THHVNDPQ*GVRSGT*TSD**GASAVYLYGVCGF*FLNVTFDVIPRHTYPPFRVNIQPSL  423
                SSPKVENR***VFYSRLS*GIEGCGCRFVNNTSNRYTKTFQ LNNEASFKGVIISRYRYNC CNRSRRIPFALQYQGSQE*T+HVNDPQ*GVRSGT*TSD**GASAVYLYGVC F*FLNVTFDVIPRHTYPPFRVNIQPSL
Subject  10845  SSPKVENR***VFYSRLS*GIEGCGCRFVNNTSNRYTKTFQYLNNEASFKGVIISRYRYNCSCNRSRRIPFALQYQGSQE*TYHVNDPQ*GVRSGT*TSD**GASAVYLYGVCRF*FLNVTFDVIPRHTYPPFRVNIQPSL  11267

Range 2: 10845 to 11267 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
265.9 bits(574) 0.0 139/141(99%) 0/141(0%) Minus/Plus
Query        1  EGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDXXXXXXXXXXXXGPDTLLRVVDVMCLFLRALILECERYTSXXXXXXXXXVPADYNSFKRSFVVEALKGLGIPVRGVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG  423
                EGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDV+CLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVE LKGLGIPVRGVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG
Subject  10845  EGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEVLKGLGIPVRGVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG  11267

Range 3: 10988 to 11266 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
211.4 bits(455) 0.0 91/93(98%) 0/93(0%) Minus/Plus
Query        2  TGHLIEGR*RDVFILESLDTGVRKVYVYYGYSRSCNGTG*L*LL*TKLRC*GTERSWYTG*RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR  280
                TGHLIEGR*RD+FILESLDTGVRKVYVYYGYS SCNGTG*L*LL*TKLRC*GTERSWYTG*RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR
Subject  10988  TGHLIEGR*RDMFILESLDTGVRKVYVYYGYSCSCNGTG*L*LL*TKLRC*GTERSWYTG*RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR  11266

Range 4: 10844 to 10936 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.1 bits(151) 0.0 30/31(97%) 0/31(0%) Minus/Plus
Query      332  RGKVVC*PEKVGRCDEG*RRTLR*EIKTHIH  424
                RGKVVC*PEKVGRCDEG*RRTLR*EIKT+IH
Subject  10844  RGKVVC*PEKVGRCDEG*RRTLR*EIKTYIH  10936

Range 5: 10844 to 11266 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
258.1 bits(557) 0.0 140/141(99%) 0/141(0%) Plus/Minus
Query        2  PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTPLTGIPRPFSASTTKLRLKEL*SAGXXXXXXXXXXDVYLSHSSIKALKNKHITSTTLNKVSGXXXXXXXXXXXXLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPS  424
                PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTPLTGIPRPFS STTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPS
Subject  10844  PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTPLTGIPRPFSTSTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPS  11266

Range 6: 10843 to 11064 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
154.1 bits(330) 0.0 72/74(97%) 0/74(0%) Minus/Plus
Query      204  *REGCMLTRKGG*V*RGITSNVTLRN*NPHTP*R*TAEAPY*SEV*VPDRTPY*GSLT*CVYS*EP*YWSAKGI  425
                *REGCMLTRKGG*V*RGITSNVTLRN*N HTP*R*TAEAPY*SEV*VPDRTPY*GSLT* VYS*EP*YWSAKGI
Subject  10843  *REGCMLTRKGG*V*RGITSNVTLRN*NLHTP*R*TAEAPY*SEV*VPDRTPY*GSLT*YVYS*EP*YWSAKGI  11064

Range 7: 11107 to 11265 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
114.7 bits(244) 0.0 52/53(98%) 0/53(0%) Minus/Plus
Query        3  IITPLNEASLLRH*KVLVYRLEVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGE  161
                IITPLNEASLLR+*KVLVYRLEVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGE
Subject  11107  IITPLNEASLLRY*KVLVYRLEVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGE  11265

Range 8: 11107 to 11265 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
116.5 bits(248) 0.0 53/53(100%) 0/53(0%) Plus/Minus
Query        3  LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL*PVYQDLSVPQQRSFV*RSYN  161
                LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL*PVYQDLSVPQQRSFV*RSYN
Subject  11107  LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL*PVYQDLSVPQQRSFV*RSYN  11265

Range 9: 10843 to 10932 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
69.3 bits(145) 0.0 29/30(97%) 0/30(0%) Plus/Minus
Query      336  MWVLISQRNVRRYPSSHLPTFSG*HTTFPL  425
                M VLISQRNVRRYPSSHLPTFSG*HTTFPL
Subject  10843  M*VLISQRNVRRYPSSHLPTFSG*HTTFPL  10932

Range 10: 10987 to 11070 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
64.8 bits(135) 0.0 27/28(96%) 0/28(0%) Plus/Minus
Query      198  *TYTFRTPVSRLSRINTSRQRPSIRCPV  281
                *TYTFRTPVSRLSRIN SRQRPSIRCPV
Subject  10987  *TYTFRTPVSRLSRINISRQRPSIRCPV  11070

Nucleotide Sequence (725 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
73
146
219
292
365
438
511
584
657
725

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
574.7 3068.4 33% 4.539e-162 98% GU983863.1
571.1 3064.3 33% 5.76e-161 98% KX756669.1
569.2 3057.9 33% 2.052e-160 97% JX559645.1
569.2 3055.2 33% 2.052e-160 96% GQ352631.1
569.2 3022.6 33% 2.052e-160 92% EU344893.1

Alignments

Grapevine leafroll associated virus 3 isolate WA MR, complete genome

Sequence ID: GU983863.1 Length: 18498 Number of Matches: 11

Range 1: 2658 to 3380 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
574.7 bits(1248) 0.0 238/241(99%) 0/241(0%) Minus/Minus
Query        2  N*PRYFTNERFGHGYKRLQNVEIIVHHCLSVGGDYTRKTVTHGLKEELEDPGETPLTGFYKVIRANTLRPILNCLSHNGDD*TPHIIRRDIDLAVDDATPRNDMSLLRPDCPNAELECSILKRPYGVERVGIDPVDKIRIEDYRLEGHTRTSYNGYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL  724
                N*PRYFTNERFGHGYKRLQNVEIIVHHCLSVGGDYTRKTVTHGLKEELEDPGETPLTGFYKVIRANTLRPILNCLSHNGDD*TPHIIRRDIDLAVDDATPRNDMSLLRPDCPN  LECSILKRPYGVERVGIDPVDKIRIEDYRLEGHTRTSYN YKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL
Subject   2658  N*PRYFTNERFGHGYKRLQNVEIIVHHCLSVGGDYTRKTVTHGLKEELEDPGETPLTGFYKVIRANTLRPILNCLSHNGDD*TPHIIRRDIDLAVDDATPRNDMSLLRPDCPNGVLECSILKRPYGVERVGIDPVDKIRIEDYRLEGHTRTSYNRYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL  3380

Range 2: 2658 to 3380 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
567.0 bits(1231) 0.0 238/241(99%) 0/241(0%) Plus/Plus
Query        2  KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEFGVGAVRSQKTHVITGSRVVHSKVDISPDDMWGLVVAVMAQAIKDRAKSIRSYNFIKASEGSLAGVFKLFFQTVGDCFSSVVSTYAKAMVHDNFNVLETLISMPKAFICKVPGSV  724
                KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVR SSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFE+ VGAVRSQKTHVITGSRVVHSKVDISPDDMWGLVVAVMAQAIKDRAKSIRSYNFIKASEGSLAGVFKLFFQTVGDCFSSVVSTYAKAMVHDNFNVLETLISMPKAFICKVPGSV
Subject   2658  KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRASSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAVRSQKTHVITGSRVVHSKVDISPDDMWGLVVAVMAQAIKDRAKSIRSYNFIKASEGSLAGVFKLFFQTVGDCFSSVVSTYAKAMVHDNFNVLETLISMPKAFICKVPGSV  3380

Range 3: 2657 to 3136 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
374.0 bits(810) 0.0 158/160(99%) 0/160(0%) Plus/Plus
Query        1  EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTRCSWF*CVLQDDSPRFGFCRQDLFLRAQHHRDV*E*NIRVRRWGSQVAKDSCHYGESRRPQQGRYLSG*YVGF  480
                EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRT FIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYT CSWF*CVLQDDSPRFGFCRQDLFLRAQHHRDV*E*NIRVRRWGSQVAKDSCHYGESRRPQQGRYLSG*YVGF
Subject   2657  EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTRFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTCCSWF*CVLQDDSPRFGFCRQDLFLRAQHHRDV*E*NIRVRRWGSQVAKDSCHYGESRRPQQGRYLSG*YVGF  3136

Range 4: 3188 to 3379 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.0 bits(308) 0.0 64/64(100%) 0/64(0%) Plus/Plus
Query      532  LL*LYKSQ*GESRRGLQALLSDRG*LFFECSLHLR*GNGAR*FQRFGDAYIHAQSVHL*STWVS  723
                LL*LYKSQ*GESRRGLQALLSDRG*LFFECSLHLR*GNGAR*FQRFGDAYIHAQSVHL*STWVS
Subject   3188  LL*LYKSQ*GESRRGLQALLSDRG*LFFECSLHLR*GNGAR*FQRFGDAYIHAQSVHL*STWVS  3379

Range 5: 2657 to 3136 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
359.8 bits(779) 0.0 157/160(98%) 0/160(0%) Minus/Minus
Query        1  KPHISSGEISTLLWTTRLPVMT*VFCDLTAPTPNSNVLFSNVPMVLSA*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF  480
                KPHISSGEISTLLWTTRLPVMT*VFCDLTAPT  SNVLFSNVPMVLSA*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDE RT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF
Subject   2657  KPHISSGEISTLLWTTRLPVMT*VFCDLTAPTAYSNVLFSNVPMVLSA*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEART*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF  3136

Range 6: 3185 to 3379 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
142.2 bits(304) 0.0 65/65(100%) 0/65(0%) Minus/Minus
Query      529  TDPGTLQMNALGMDISVSKTLKLSCTIALA*VETTLEKQSPTV*KKSLKTPARLPSLAFIKL*ER  723
                TDPGTLQMNALGMDISVSKTLKLSCTIALA*VETTLEKQSPTV*KKSLKTPARLPSLAFIKL*ER
Subject   3185  TDPGTLQMNALGMDISVSKTLKLSCTIALA*VETTLEKQSPTV*KKSLKTPARLPSLAFIKL*ER  3379

Range 7: 2989 to 3381 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
261.3 bits(564) 0.0 129/131(98%) 0/131(0%) Plus/Plus
Query      333  PTRSTP*GRLRIEHSSSALGQSGRKRLMSLRGVASSTARSISLRMICGV*SSPLWLRQLRIGRRVFALITL*KXXXXXXXXXXXXXXXPWVTVFRV*SPPTLRQWCTIISTFWRRLYPCPKRSFVKYLGQL  725
                PTRSTP*GRLRIEHSS+ LGQSGRKRLMSLRGVASSTARSISLRMICGV*SSPLWLRQLRIGRRVFALITL*KPVRGVSPGSSSSSFRPWVTVFRV*SPPTLRQWCTIISTFWRRLYPCPKRSFVKYLGQL
Subject   2989  PTRSTP*GRLRIEHSSTPLGQSGRKRLMSLRGVASSTARSISLRMICGV*SSPLWLRQLRIGRRVFALITL*KPVRGVSPGSSSSSFRPWVTVFRV*SPPTLRQWCTIISTFWRRLYPCPKRSFVKYLGQL  3381

Range 8: 2659 to 2907 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
207.7 bits(447) 0.0 83/83(100%) 0/83(0%) Plus/Plus
Query        3  RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRW  251
                RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRW
Subject   2659  RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRW  2907

Range 9: 2779 to 3135 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
283.8 bits(613) 0.0 118/119(99%) 0/119(0%) Minus/Minus
Query      123  NPTYHPERYRPCCGRRDSP**HESFAT*LPQRRTRMFYSQTSLWC*ARRNRSCRQNPNRGLSS*RTH*NQLQRV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T  479
                NPTYHPERYRPCCGRRDSP**HESFAT*LPQRRTRMFYSQTSLWC*ARRNRSCRQNPNRGLSS*RTH*NQLQ+V*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T
Subject   2779  NPTYHPERYRPCCGRRDSP**HESFAT*LPQRRTRMFYSQTSLWC*ARRNRSCRQNPNRGLSS*RTH*NQLQQV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T  3135

Range 10: 3265 to 3381 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
94.5 bits(200) 0.0 39/39(100%) 0/39(0%) Minus/Minus
Query      609  QLTQVLYK*TLWAWI*ASPKR*NYRAPLP*RRWRLHSKN  725
                QLTQVLYK*TLWAWI*ASPKR*NYRAPLP*RRWRLHSKN
Subject   3265  QLTQVLYK*TLWAWI*ASPKR*NYRAPLP*RRWRLHSKN  3381

Range 11: 2659 to 2718 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.3 bits(123) 0.0 20/20(100%) 0/20(0%) Minus/Minus
Query        3  NVHTSHHTDQHCRPGNHLPS  62
                NVHTSHHTDQHCRPGNHLPS
Subject   2659  NVHTSHHTDQHCRPGNHLPS  2718

Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome

Sequence ID: KX756669.1 Length: 18313 Number of Matches: 11

Range 1: 2473 to 3195 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
571.1 bits(1240) 0.0 237/241(98%) 0/241(0%) Minus/Minus
Query        2  N*PRYFTNERFGHGYKRLQNVEIIVHHCLSVGGDYTRKTVTHGLKEELEDPGETPLTGFYKVIRANTLRPILNCLSHNGDD*TPHIIRRDIDLAVDDATPRNDMSLLRPDCPNAELECSILKRPYGVERVGIDPVDKIRIEDYRLEGHTRTSYNGYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL  724
                N*PRYFTNERFGHGYKRLQNVEIIVHHCLSVGGDYTRKTVTHGLKEELEDPGETPLTGFYKVIRANTLRPILNCLSHNGDD*TPHIIRRDIDLAVDDATPRNDMSLLRPDCPN  LECSILKRPYGVERVGIDPVDKIRIEDYRLEGHTRTSYN YKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKL HVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL
Subject   2473  N*PRYFTNERFGHGYKRLQNVEIIVHHCLSVGGDYTRKTVTHGLKEELEDPGETPLTGFYKVIRANTLRPILNCLSHNGDD*TPHIIRRDIDLAVDDATPRNDMSLLRPDCPNGVLECSILKRPYGVERVGIDPVDKIRIEDYRLEGHTRTSYNRYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLIHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL  3195

Range 2: 2473 to 3195 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
567.9 bits(1233) 0.0 238/241(99%) 0/241(0%) Plus/Plus
Query        2  KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEFGVGAVRSQKTHVITGSRVVHSKVDISPDDMWGLVVAVMAQAIKDRAKSIRSYNFIKASEGSLAGVFKLFFQTVGDCFSSVVSTYAKAMVHDNFNVLETLISMPKAFICKVPGSV  724
                KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNV+KLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFE+ VGAVRSQKTHVITGSRVVHSKVDISPDDMWGLVVAVMAQAIKDRAKSIRSYNFIKASEGSLAGVFKLFFQTVGDCFSSVVSTYAKAMVHDNFNVLETLISMPKAFICKVPGSV
Subject   2473  KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVYKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAVRSQKTHVITGSRVVHSKVDISPDDMWGLVVAVMAQAIKDRAKSIRSYNFIKASEGSLAGVFKLFFQTVGDCFSSVVSTYAKAMVHDNFNVLETLISMPKAFICKVPGSV  3195

Range 3: 2472 to 2951 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
377.7 bits(818) 0.0 159/160(99%) 0/160(0%) Plus/Plus
Query        1  EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTRCSWF*CVLQDDSPRFGFCRQDLFLRAQHHRDV*E*NIRVRRWGSQVAKDSCHYGESRRPQQGRYLSG*YVGF  480
                EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYT CSWF*CVLQDDSPRFGFCRQDLFLRAQHHRDV*E*NIRVRRWGSQVAKDSCHYGESRRPQQGRYLSG*YVGF
Subject   2472  EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTCCSWF*CVLQDDSPRFGFCRQDLFLRAQHHRDV*E*NIRVRRWGSQVAKDSCHYGESRRPQQGRYLSG*YVGF  2951

Range 4: 3003 to 3194 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.0 bits(308) 0.0 64/64(100%) 0/64(0%) Plus/Plus
Query      532  LL*LYKSQ*GESRRGLQALLSDRG*LFFECSLHLR*GNGAR*FQRFGDAYIHAQSVHL*STWVS  723
                LL*LYKSQ*GESRRGLQALLSDRG*LFFECSLHLR*GNGAR*FQRFGDAYIHAQSVHL*STWVS
Subject   3003  LL*LYKSQ*GESRRGLQALLSDRG*LFFECSLHLR*GNGAR*FQRFGDAYIHAQSVHL*STWVS  3194

Range 5: 2472 to 2951 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
358.0 bits(775) 0.0 157/160(98%) 0/160(0%) Minus/Minus
Query        1  KPHISSGEISTLLWTTRLPVMT*VFCDLTAPTPNSNVLFSNVPMVLSA*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF  480
                KPHISSGEISTLLWTTRLPVMT*VFCDLTAPT  SNVLFSNVPMVLSA*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSL TFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF
Subject   2472  KPHISSGEISTLLWTTRLPVMT*VFCDLTAPTAYSNVLFSNVPMVLSA*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLYTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF  2951

Range 6: 3000 to 3194 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
142.2 bits(304) 0.0 65/65(100%) 0/65(0%) Minus/Minus
Query      529  TDPGTLQMNALGMDISVSKTLKLSCTIALA*VETTLEKQSPTV*KKSLKTPARLPSLAFIKL*ER  723
                TDPGTLQMNALGMDISVSKTLKLSCTIALA*VETTLEKQSPTV*KKSLKTPARLPSLAFIKL*ER
Subject   3000  TDPGTLQMNALGMDISVSKTLKLSCTIALA*VETTLEKQSPTV*KKSLKTPARLPSLAFIKL*ER  3194

Range 7: 2804 to 3196 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
261.3 bits(564) 0.0 129/131(98%) 0/131(0%) Plus/Plus
Query      333  PTRSTP*GRLRIEHSSSALGQSGRKRLMSLRGVASSTARSISLRMICGV*SSPLWLRQLRIGRRVFALITL*KXXXXXXXXXXXXXXXPWVTVFRV*SPPTLRQWCTIISTFWRRLYPCPKRSFVKYLGQL  725
                PTRSTP*GRLRIEHSS+ LGQSGRKRLMSLRGVASSTARSISLRMICGV*SSPLWLRQLRIGRRVFALITL*KPVRGVSPGSSSSSFRPWVTVFRV*SPPTLRQWCTIISTFWRRLYPCPKRSFVKYLGQL
Subject   2804  PTRSTP*GRLRIEHSSTPLGQSGRKRLMSLRGVASSTARSISLRMICGV*SSPLWLRQLRIGRRVFALITL*KPVRGVSPGSSSSSFRPWVTVFRV*SPPTLRQWCTIISTFWRRLYPCPKRSFVKYLGQL  3196

Range 8: 2474 to 2722 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
206.8 bits(445) 0.0 82/83(99%) 0/83(0%) Plus/Plus
Query        3  RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRW  251
                RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTC+SLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRW
Subject   2474  RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCISLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRW  2722

Range 9: 2594 to 2950 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
281.5 bits(608) 0.0 117/119(98%) 0/119(0%) Minus/Minus
Query      123  NPTYHPERYRPCCGRRDSP**HESFAT*LPQRRTRMFYSQTSLWC*ARRNRSCRQNPNRGLSS*RTH*NQLQRV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T  479
                NPTYHPERYRPCCGRRDSP**HESFAT*LPQRRTRMFYSQTSLWC*ARRNRSCRQNPNRGLSS*RTH*NQLQ+V*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA T
Subject   2594  NPTYHPERYRPCCGRRDSP**HESFAT*LPQRRTRMFYSQTSLWC*ARRNRSCRQNPNRGLSS*RTH*NQLQQV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQAYT  2950

Range 10: 3080 to 3196 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
94.5 bits(200) 0.0 39/39(100%) 0/39(0%) Minus/Minus
Query      609  QLTQVLYK*TLWAWI*ASPKR*NYRAPLP*RRWRLHSKN  725
                QLTQVLYK*TLWAWI*ASPKR*NYRAPLP*RRWRLHSKN
Subject   3080  QLTQVLYK*TLWAWI*ASPKR*NYRAPLP*RRWRLHSKN  3196

Range 11: 2474 to 2533 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.3 bits(123) 0.0 20/20(100%) 0/20(0%) Minus/Minus
Query        3  NVHTSHHTDQHCRPGNHLPS  62
                NVHTSHHTDQHCRPGNHLPS
Subject   2474  NVHTSHHTDQHCRPGNHLPS  2533

Grapevine leafroll associated virus 3 isolate 3138 07, complete genome

Sequence ID: JX559645.1 Length: 18498 Number of Matches: 11

Range 1: 2658 to 3380 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
569.2 bits(1236) 0.0 239/241(99%) 0/241(0%) Plus/Plus
Query        2  KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEFGVGAVRSQKTHVITGSRVVHSKVDISPDDMWGLVVAVMAQAIKDRAKSIRSYNFIKASEGSLAGVFKLFFQTVGDCFSSVVSTYAKAMVHDNFNVLETLISMPKAFICKVPGSV  724
                KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFE+ VGAVRSQKTHVITGSRVVHSKVDISPDDMWGLVVAVMAQAIKDRAKSIRSYNFIKASEGSLAGVFKLFFQTVGDCFSSVVSTYAKAMVHDNFNVLETLISMPKAFICKVPGSV
Subject   2658  KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAVRSQKTHVITGSRVVHSKVDISPDDMWGLVVAVMAQAIKDRAKSIRSYNFIKASEGSLAGVFKLFFQTVGDCFSSVVSTYAKAMVHDNFNVLETLISMPKAFICKVPGSV  3380

Range 2: 2658 to 3380 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
566.5 bits(1230) 0.0 236/241(98%) 0/241(0%) Minus/Minus
Query        2  N*PRYFTNERFGHGYKRLQNVEIIVHHCLSVGGDYTRKTVTHGLKEELEDPGETPLTGFYKVIRANTLRPILNCLSHNGDD*TPHIIRRDIDLAVDDATPRNDMSLLRPDCPNAELECSILKRPYGVERVGIDPVDKIRIEDYRLEGHTRTSYNGYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL  724
                N*PRYFTNERFGHGYKRLQNVEIIVHHCLSVGGDYTRKTVTHGLKEELEDPGETPLTGFYKVIRANTLRPILNCLSHNGDD*TPHIIRRDIDLAVDDATPRNDMSLLRPDCPN  LE SILKRPYGVERVGIDPVDKIRIEDYRLEG+TRTSYN YKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL
Subject   2658  N*PRYFTNERFGHGYKRLQNVEIIVHHCLSVGGDYTRKTVTHGLKEELEDPGETPLTGFYKVIRANTLRPILNCLSHNGDD*TPHIIRRDIDLAVDDATPRNDMSLLRPDCPNGVLERSILKRPYGVERVGIDPVDKIRIEDYRLEGYTRTSYNRYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL  3380

Range 3: 2657 to 3136 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
376.8 bits(816) 0.0 157/160(98%) 0/160(0%) Plus/Plus
Query        1  EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTRCSWF*CVLQDDSPRFGFCRQDLFLRAQHHRDV*E*NIRVRRWGSQVAKDSCHYGESRRPQQGRYLSG*YVGF  480
                EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYT CSWF*C+LQDDSPRFGFCRQDLFLRAQHHRDV*E*N+RVRRWGSQVAKDSCHYGESRRPQQGRYLSG*YVGF
Subject   2657  EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTCCSWF*CILQDDSPRFGFCRQDLFLRAQHHRDV*E*NVRVRRWGSQVAKDSCHYGESRRPQQGRYLSG*YVGF  3136

Range 4: 3188 to 3379 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.0 bits(308) 0.0 64/64(100%) 0/64(0%) Plus/Plus
Query      532  LL*LYKSQ*GESRRGLQALLSDRG*LFFECSLHLR*GNGAR*FQRFGDAYIHAQSVHL*STWVS  723
                LL*LYKSQ*GESRRGLQALLSDRG*LFFECSLHLR*GNGAR*FQRFGDAYIHAQSVHL*STWVS
Subject   3188  LL*LYKSQ*GESRRGLQALLSDRG*LFFECSLHLR*GNGAR*FQRFGDAYIHAQSVHL*STWVS  3379

Range 5: 2657 to 3136 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
361.7 bits(783) 0.0 158/160(99%) 0/160(0%) Minus/Minus
Query        1  KPHISSGEISTLLWTTRLPVMT*VFCDLTAPTPNSNVLFSNVPMVLSA*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF  480
                KPHISSGEISTLLWTTRLPVMT*VFCDLTAPT  SNVLFSNVPMVLSA*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF
Subject   2657  KPHISSGEISTLLWTTRLPVMT*VFCDLTAPTAYSNVLFSNVPMVLSA*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF  3136

Range 6: 3185 to 3379 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
142.2 bits(304) 0.0 65/65(100%) 0/65(0%) Minus/Minus
Query      529  TDPGTLQMNALGMDISVSKTLKLSCTIALA*VETTLEKQSPTV*KKSLKTPARLPSLAFIKL*ER  723
                TDPGTLQMNALGMDISVSKTLKLSCTIALA*VETTLEKQSPTV*KKSLKTPARLPSLAFIKL*ER
Subject   3185  TDPGTLQMNALGMDISVSKTLKLSCTIALA*VETTLEKQSPTV*KKSLKTPARLPSLAFIKL*ER  3379

Range 7: 2989 to 3381 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
257.7 bits(556) 0.0 128/131(98%) 0/131(0%) Plus/Plus
Query      333  PTRSTP*GRLRIEHSSSALGQSGRKRLMSLRGVASSTARSISLRMICGV*SSPLWLRQLRIGRRVFALITL*KXXXXXXXXXXXXXXXPWVTVFRV*SPPTLRQWCTIISTFWRRLYPCPKRSFVKYLGQL  725
                PTRSTP*GRLRIE SS+ LGQSGRKRLMSLRGVASSTARSISLRMICGV*SSPLWLRQLRIGRRVFALITL*KPVRGVSPGSSSSSFRPWVTVFRV*SPPTLRQWCTIISTFWRRLYPCPKRSFVKYLGQL
Subject   2989  PTRSTP*GRLRIERSSTPLGQSGRKRLMSLRGVASSTARSISLRMICGV*SSPLWLRQLRIGRRVFALITL*KPVRGVSPGSSSSSFRPWVTVFRV*SPPTLRQWCTIISTFWRRLYPCPKRSFVKYLGQL  3381

Range 8: 2659 to 2907 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
207.7 bits(447) 0.0 83/83(100%) 0/83(0%) Plus/Plus
Query        3  RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRW  251
                RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRW
Subject   2659  RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRW  2907

Range 9: 2779 to 3135 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
278.3 bits(601) 0.0 116/119(97%) 0/119(0%) Minus/Minus
Query      123  NPTYHPERYRPCCGRRDSP**HESFAT*LPQRRTRMFYSQTSLWC*ARRNRSCRQNPNRGLSS*RTH*NQLQRV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T  479
                NPTYHPERYRPCCGRRDSP**HESFAT*LPQRRTR FYSQTSLWC*ARRNRSCRQNPNRGLSS*R H*NQLQ+V*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T
Subject   2779  NPTYHPERYRPCCGRRDSP**HESFAT*LPQRRTRTFYSQTSLWC*ARRNRSCRQNPNRGLSS*RIH*NQLQQV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T  3135

Range 10: 3265 to 3381 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
94.5 bits(200) 0.0 39/39(100%) 0/39(0%) Minus/Minus
Query      609  QLTQVLYK*TLWAWI*ASPKR*NYRAPLP*RRWRLHSKN  725
                QLTQVLYK*TLWAWI*ASPKR*NYRAPLP*RRWRLHSKN
Subject   3265  QLTQVLYK*TLWAWI*ASPKR*NYRAPLP*RRWRLHSKN  3381

Range 11: 2659 to 2718 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.3 bits(123) 0.0 20/20(100%) 0/20(0%) Minus/Minus
Query        3  NVHTSHHTDQHCRPGNHLPS  62
                NVHTSHHTDQHCRPGNHLPS
Subject   2659  NVHTSHHTDQHCRPGNHLPS  2718

Grapevine leafroll associated virus 3 isolate 621, complete genome

Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 11

Range 1: 2658 to 3380 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
569.2 bits(1236) 0.0 239/241(99%) 0/241(0%) Plus/Plus
Query        2  KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEFGVGAVRSQKTHVITGSRVVHSKVDISPDDMWGLVVAVMAQAIKDRAKSIRSYNFIKASEGSLAGVFKLFFQTVGDCFSSVVSTYAKAMVHDNFNVLETLISMPKAFICKVPGSV  724
                KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFE+ VGAVRSQKTHVITGSRVVHSKVDISPDDMWGLVVAVMAQAIKDRAKSIRSYNFIKASEGSLAGVFKLFFQTVGDCFSSVVSTYAKAMVHDNFNVLETLISMPKAFICKVPGSV
Subject   2658  KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAVRSQKTHVITGSRVVHSKVDISPDDMWGLVVAVMAQAIKDRAKSIRSYNFIKASEGSLAGVFKLFFQTVGDCFSSVVSTYAKAMVHDNFNVLETLISMPKAFICKVPGSV  3380

Range 2: 2658 to 3380 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
565.6 bits(1228) 0.0 235/241(98%) 0/241(0%) Minus/Minus
Query        2  N*PRYFTNERFGHGYKRLQNVEIIVHHCLSVGGDYTRKTVTHGLKEELEDPGETPLTGFYKVIRANTLRPILNCLSHNGDD*TPHIIRRDIDLAVDDATPRNDMSLLRPDCPNAELECSILKRPYGVERVGIDPVDKIRIEDYRLEGHTRTSYNGYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL  724
                N*PRYFTNERFGHGYKRLQNVEIIVHHCLSVGGDYTRKTVTHGLKEELEDPGETPLTGFYKVIRANTLRPILNCLSHN D+*TPHIIRRDIDLAVDDATPRNDMSLLRPDCPN  LECSILKRPYGVERVGIDPVDKIRI DYRLEGHTRTSYN YKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL
Subject   2658  N*PRYFTNERFGHGYKRLQNVEIIVHHCLSVGGDYTRKTVTHGLKEELEDPGETPLTGFYKVIRANTLRPILNCLSHNSDN*TPHIIRRDIDLAVDDATPRNDMSLLRPDCPNGVLECSILKRPYGVERVGIDPVDKIRI*DYRLEGHTRTSYNRYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL  3380

Range 3: 2657 to 3136 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
377.7 bits(818) 0.0 159/160(99%) 0/160(0%) Plus/Plus
Query        1  EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTRCSWF*CVLQDDSPRFGFCRQDLFLRAQHHRDV*E*NIRVRRWGSQVAKDSCHYGESRRPQQGRYLSG*YVGF  480
                EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYT CSWF*CVLQDDSPRFGFCRQDLFLRAQHHRDV*E*NIRVRRWGSQVAKDSCHYGESRRPQQGRYLSG*YVGF
Subject   2657  EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTCCSWF*CVLQDDSPRFGFCRQDLFLRAQHHRDV*E*NIRVRRWGSQVAKDSCHYGESRRPQQGRYLSG*YVGF  3136

Range 4: 3188 to 3379 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.0 bits(308) 0.0 64/64(100%) 0/64(0%) Plus/Plus
Query      532  LL*LYKSQ*GESRRGLQALLSDRG*LFFECSLHLR*GNGAR*FQRFGDAYIHAQSVHL*STWVS  723
                LL*LYKSQ*GESRRGLQALLSDRG*LFFECSLHLR*GNGAR*FQRFGDAYIHAQSVHL*STWVS
Subject   3188  LL*LYKSQ*GESRRGLQALLSDRG*LFFECSLHLR*GNGAR*FQRFGDAYIHAQSVHL*STWVS  3379

Range 5: 2657 to 3136 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
361.7 bits(783) 0.0 158/160(99%) 0/160(0%) Minus/Minus
Query        1  KPHISSGEISTLLWTTRLPVMT*VFCDLTAPTPNSNVLFSNVPMVLSA*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF  480
                KPHISSGEISTLLWTTRLPVMT*VFCDLTAPT  SNVLFSNVPMVLSA*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF
Subject   2657  KPHISSGEISTLLWTTRLPVMT*VFCDLTAPTAYSNVLFSNVPMVLSA*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF  3136

Range 6: 3185 to 3379 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
142.2 bits(304) 0.0 65/65(100%) 0/65(0%) Minus/Minus
Query      529  TDPGTLQMNALGMDISVSKTLKLSCTIALA*VETTLEKQSPTV*KKSLKTPARLPSLAFIKL*ER  723
                TDPGTLQMNALGMDISVSKTLKLSCTIALA*VETTLEKQSPTV*KKSLKTPARLPSLAFIKL*ER
Subject   3185  TDPGTLQMNALGMDISVSKTLKLSCTIALA*VETTLEKQSPTV*KKSLKTPARLPSLAFIKL*ER  3379

Range 7: 2989 to 3381 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
252.6 bits(545) 0.0 126/131(96%) 0/131(0%) Plus/Plus
Query      333  PTRSTP*GRLRIEHSSSALGQSGRKRLMSLRGVASSTARSISLRMICGV*SSPLWLRQLRIGRRVFALITL*KXXXXXXXXXXXXXXXPWVTVFRV*SPPTLRQWCTIISTFWRRLYPCPKRSFVKYLGQL  725
                PTRSTP*GRLRIEHSS+ LGQSGRKRLMSLRGVASSTARSISLRMICGV* S LWL+QLRIGRRVFALITL*KPVRGVSPGSSSSSFRPWVTVFRV*SPPTLRQWCTIISTFWRRLYPCPKRSFVKYLGQL
Subject   2989  PTRSTP*GRLRIEHSSTPLGQSGRKRLMSLRGVASSTARSISLRMICGV*LSLLWLKQLRIGRRVFALITL*KPVRGVSPGSSSSSFRPWVTVFRV*SPPTLRQWCTIISTFWRRLYPCPKRSFVKYLGQL  3381

Range 8: 2659 to 2907 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
207.7 bits(447) 0.0 83/83(100%) 0/83(0%) Plus/Plus
Query        3  RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRW  251
                RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRW
Subject   2659  RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRW  2907

Range 9: 2779 to 3135 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
280.6 bits(606) 0.0 117/119(98%) 0/119(0%) Minus/Minus
Query      123  NPTYHPERYRPCCGRRDSP**HESFAT*LPQRRTRMFYSQTSLWC*ARRNRSCRQNPNRGLSS*RTH*NQLQRV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T  479
                NPTYHPERYRPCCGRRDSP**HESFAT*LPQRRTRMFYSQTSLWC*ARRNRSCRQNPN GLSS*RTH*NQLQ+V*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T
Subject   2779  NPTYHPERYRPCCGRRDSP**HESFAT*LPQRRTRMFYSQTSLWC*ARRNRSCRQNPNLGLSS*RTH*NQLQQV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T  3135

Range 10: 3265 to 3381 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
94.5 bits(200) 0.0 39/39(100%) 0/39(0%) Minus/Minus
Query      609  QLTQVLYK*TLWAWI*ASPKR*NYRAPLP*RRWRLHSKN  725
                QLTQVLYK*TLWAWI*ASPKR*NYRAPLP*RRWRLHSKN
Subject   3265  QLTQVLYK*TLWAWI*ASPKR*NYRAPLP*RRWRLHSKN  3381

Range 11: 2659 to 2718 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.3 bits(123) 0.0 20/20(100%) 0/20(0%) Minus/Minus
Query        3  NVHTSHHTDQHCRPGNHLPS  62
                NVHTSHHTDQHCRPGNHLPS
Subject   2659  NVHTSHHTDQHCRPGNHLPS  2718

Grapevine leafroll associated virus 3 isolate Cl 766, complete genome

Sequence ID: EU344893.1 Length: 17919 Number of Matches: 11

Range 1: 2079 to 2801 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
569.2 bits(1236) 0.0 239/241(99%) 0/241(0%) Plus/Plus
Query        2  KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEFGVGAVRSQKTHVITGSRVVHSKVDISPDDMWGLVVAVMAQAIKDRAKSIRSYNFIKASEGSLAGVFKLFFQTVGDCFSSVVSTYAKAMVHDNFNVLETLISMPKAFICKVPGSV  724
                KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFE+ VGAVRSQKTHVITGSRVVHSKVDISPDDMWGLVVAVMAQAIKDRAKSIRSYNFIKASEGSLAGVFKLFFQTVGDCFSSVVSTYAKAMVHDNFNVLETLISMPKAFICKVPGSV
Subject   2079  KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAVRSQKTHVITGSRVVHSKVDISPDDMWGLVVAVMAQAIKDRAKSIRSYNFIKASEGSLAGVFKLFFQTVGDCFSSVVSTYAKAMVHDNFNVLETLISMPKAFICKVPGSV  2801

Range 2: 2079 to 2801 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
565.1 bits(1227) 0.0 234/241(97%) 0/241(0%) Minus/Minus
Query        2  N*PRYFTNERFGHGYKRLQNVEIIVHHCLSVGGDYTRKTVTHGLKEELEDPGETPLTGFYKVIRANTLRPILNCLSHNGDD*TPHIIRRDIDLAVDDATPRNDMSLLRPDCPNAELECSILKRPYGVERVGIDPVDKIRIEDYRLEGHTRTSYNGYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL  724
                N PRYFT+ERFGH YKRLQNVEIIVHHCLSVGGDYTRKTVTHGLKEELEDPGETPLTGFYKVIRANTLRPILNCLSHNGDD*TPHIIR DIDLAVDDATPRND+SLLRPDCPN  LECSILKRPYGVERVGIDPVDKIRIEDYRLEGHTRTSYNGYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL
Subject   2079  NRPRYFTDERFGHRYKRLQNVEIIVHHCLSVGGDYTRKTVTHGLKEELEDPGETPLTGFYKVIRANTLRPILNCLSHNGDD*TPHIIRGDIDLAVDDATPRNDVSLLRPDCPNGVLECSILKRPYGVERVGIDPVDKIRIEDYRLEGHTRTSYNGYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL  2801

Range 3: 2078 to 2557 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
373.6 bits(809) 0.0 158/160(99%) 0/160(0%) Plus/Plus
Query        1  EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTRCSWF*CVLQDDSPRFGFCRQDLFLRAQHHRDV*E*NIRVRRWGSQVAKDSCHYGESRRPQQGRYLSG*YVGF  480
                EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTRCSWF*CVLQDDSPRFGFCRQDLFLRAQHHRDV*E*NIRVRRWGSQVAKDS HYGESRRPQQGRYL G*YVGF
Subject   2078  EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTRCSWF*CVLQDDSPRFGFCRQDLFLRAQHHRDV*E*NIRVRRWGSQVAKDSRHYGESRRPQQGRYLPG*YVGF  2557

Range 4: 2609 to 2797 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
139.4 bits(298) 0.0 62/63(98%) 0/63(0%) Plus/Plus
Query      532  LL*LYKSQ*GESRRGLQALLSDRG*LFFECSLHLR*GNGAR*FQRFGDAYIHAQSVHL*STWV  720
                LL*LYKSQ*GESRRGLQALLSDRG*LFFECSLHLR*GNGAR*FQRFGDAYI+AQSVHL*STWV
Subject   2609  LL*LYKSQ*GESRRGLQALLSDRG*LFFECSLHLR*GNGAR*FQRFGDAYIYAQSVHL*STWV  2797

Range 5: 2078 to 2557 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
361.7 bits(783) 0.0 158/160(99%) 0/160(0%) Minus/Minus
Query        1  KPHISSGEISTLLWTTRLPVMT*VFCDLTAPTPNSNVLFSNVPMVLSA*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF  480
                KPHISSGEISTLLWTTRLPVMT*VFCDLTAPT  SNVLFSNVPMVLSA*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF
Subject   2078  KPHISSGEISTLLWTTRLPVMT*VFCDLTAPTAYSNVLFSNVPMVLSA*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF  2557

Range 6: 2606 to 2800 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
140.4 bits(300) 0.0 64/65(98%) 0/65(0%) Minus/Minus
Query      529  TDPGTLQMNALGMDISVSKTLKLSCTIALA*VETTLEKQSPTV*KKSLKTPARLPSLAFIKL*ER  723
                TDPGTLQMNALG+DISVSKTLKLSCTIALA*VETTLEKQSPTV*KKSLKTPARLPSLAFIKL*ER
Subject   2606  TDPGTLQMNALGIDISVSKTLKLSCTIALA*VETTLEKQSPTV*KKSLKTPARLPSLAFIKL*ER  2800

Range 7: 2410 to 2802 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
243.9 bits(526) 0.0 124/131(95%) 0/131(0%) Plus/Plus
Query      333  PTRSTP*GRLRIEHSSSALGQSGRKRLMSLRGVASSTARSISLRMICGV*SSPLWLRQLRIGRRVFALITL*KXXXXXXXXXXXXXXXPWVTVFRV*SPPTLRQWCTIISTFWRRLYPCPKRSFVKYLGQL  725
                PTRSTP*GRLRIEHSS+ LGQSGRKRL SLRGVASSTARSIS RMICGV*SSPLWLRQLRIGRRVFALITL*KPVRGVSPGSSSSSFRPWVTVFRV*SPPTLRQWCTIISTFWRRLY CPKRS VKYLG L
Subject   2410  PTRSTP*GRLRIEHSSTPLGQSGRKRLTSLRGVASSTARSISPRMICGV*SSPLWLRQLRIGRRVFALITL*KPVRGVSPGSSSSSFRPWVTVFRV*SPPTLRQWCTIISTFWRRLYLCPKRSSVKYLGLL  2802

Range 8: 2080 to 2328 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
207.7 bits(447) 0.0 83/83(100%) 0/83(0%) Plus/Plus
Query        3  RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRW  251
                RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRW
Subject   2080  RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRW  2328

Range 9: 2200 to 2556 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
278.7 bits(602) 0.0 117/119(98%) 0/119(0%) Minus/Minus
Query      123  NPTYHPERYRPCCGRRDSP**HESFAT*LPQRRTRMFYSQTSLWC*ARRNRSCRQNPNRGLSS*RTH*NQLQRV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T  479
                NPTYHP RYRPCCGRRDSP** ESFAT*LPQRRTRMFYSQTSLWC*ARRNRSCRQNPNRGLSS*RTH*NQLQRV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T
Subject   2200  NPTYHPGRYRPCCGRRDSP**RESFAT*LPQRRTRMFYSQTSLWC*ARRNRSCRQNPNRGLSS*RTH*NQLQRV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T  2556

Range 10: 2686 to 2802 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.5 bits(176) 0.0 36/39(92%) 0/39(0%) Minus/Minus
Query      609  QLTQVLYK*TLWAWI*ASPKR*NYRAPLP*RRWRLHSKN  725
                Q TQVLY+*TLWA I*ASPKR*NYRAPLP*RRWRLHSKN
Subject   2686  QQTQVLYR*TLWA*I*ASPKR*NYRAPLP*RRWRLHSKN  2802

Range 11: 2080 to 2139 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.3 bits(123) 0.0 20/20(100%) 0/20(0%) Minus/Minus
Query        3  NVHTSHHTDQHCRPGNHLPS  62
                NVHTSHHTDQHCRPGNHLPS
Subject   2080  NVHTSHHTDQHCRPGNHLPS  2139

Nucleotide Sequence (303 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
31
62
93
124
155
186
217
248
279
303

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
233.8 1291.8 29% 5.011e-60 97% EU259806.1
230.6 1282.2 29% 4.629e-59 97% GQ352632.1
227.9 1264.9 29% 3.112e-58 95% KX756668.1
225.6 1263.5 29% 1.523e-57 95% KX701860.1
225.1 1268.1 29% 2.093e-57 95% KJ174518.1

Alignments

Grapevine leafroll associated virus 3 isolate GP18, complete genome

Sequence ID: EU259806.1 Length: 18498 Number of Matches: 8

Range 1: 3688 to 3981 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
233.8 bits(504) 0.0 98/98(100%) 0/98(0%) Minus/Plus
Query        2  *LVGLRRRPFLALRRSFPQVHYSTTAV*LKMKGLMLWCAQRML*THRWAYWRRRV*L*AR**LDRKNFGVKFP*MTLLPLHCGIRCLLGFLWRLWVRP  295
                *LVGLRRRPFLALRRSFPQVHYSTTAV*LKMKGLMLWCAQRML*THRWAYWRRRV*L*AR**LDRKNFGVKFP*MTLLPLHCGIRCLLGFLWRLWVRP
Subject   3688  *LVGLRRRPFLALRRSFPQVHYSTTAV*LKMKGLMLWCAQRML*THRWAYWRRRV*L*AR**LDRKNFGVKFP*MTLLPLHCGIRCLLGFLWRLWVRP  3981

Range 2: 3681 to 3980 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
229.7 bits(495) 0.0 98/100(98%) 0/100(0%) Plus/Minus
Query        3  GRTQRRHKNPNKHLIPQCKGSKVIQGNFTPKFFRSSYYLAHSYTRRLQ*AHR*VYSILCAHQSIKPFIFS*TAVVE**TCGKERRNARKGLRRSPTSY*T  302
                GRTQRRHKNPNKHLIPQCKGSKVI GNFTPKFFRSSYYLAHSYTRRLQ*AHR*VYSILCAHQSIKPFIFS*TAVVE**TCGKERRNARKGLRRSPTSY T
Subject   3681  GRTQRRHKNPNKHLIPQCKGSKVI*GNFTPKFFRSSYYLAHSYTRRLQ*AHR*VYSILCAHQSIKPFIFS*TAVVE**TCGKERRNARKGLRRSPTSYQT  3980

Range 3: 3680 to 3889 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
175.6 bits(377) 0.0 68/70(97%) 0/70(0%) Minus/Plus
Query       94  GFSSSWGCDEGLFWHYVVLFHRFTILRPRFN*R*KA*CSGAHRECYKLTGGLTGDVACSCEQGSSWIERI  303
                GF SSWGCDEGLFWHYVVLFHRFTILRPRF+*R*KA*CSGAHRECYKLTGGLTGDVACSCEQGSSWIERI
Subject   3680  GFGSSWGCDEGLFWHYVVLFHRFTILRPRFS*R*KA*CSGAHRECYKLTGGLTGDVACSCEQGSSWIERI  3889

Range 4: 3926 to 3982 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.1 bits(116) 0.0 19/19(100%) 0/19(0%) Minus/Plus
Query        1  CIAE*GAYWDFCGVFGCGP  57
                CIAE*GAYWDFCGVFGCGP
Subject   3926  CIAE*GAYWDFCGVFGCGP  3982

Range 5: 3682 to 3981 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
210.9 bits(454) 0.0 98/100(98%) 0/100(0%) Plus/Minus
Query        2  GPHPKTPQKSQ*APYSAMQR**SHSRKLHSKILSIQLLPCSQLHATXXXXXXXXL*HSLCAPEHQAFHLQLNRGRRIVNLWKRTT*CQKRPSSQPHELLN  301
                GPHPKTPQKSQ*APYSAMQR**SH RKLHSKILSIQLLPCSQLHATSPVSPPVSL*HSLCAPEHQAFHLQLNRGRRIVNLWKRTT*CQKRPSSQPHEL N
Subject   3682  GPHPKTPQKSQ*APYSAMQR**SHLRKLHSKILSIQLLPCSQLHATSPVSPPVSL*HSLCAPEHQAFHLQLNRGRRIVNLWKRTT*CQKRPSSQPHELPN  3981

Range 6: 3681 to 3980 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
184.6 bits(398) 0.0 99/100(99%) 0/100(0%) Minus/Plus
Query        3  GLVARGAATKAXXXXXXXXXXXXXFYDRGLTEDERLDALVRTENAINSPVGLLETSRVAVSKVVAGSKEFWSEVSLNDFTTFALRNKVLIGIFVASLGAA  302
                GLVARGAATKAFSGITSFFSTGSLFYDRGL EDERLDALVRTENAINSPVGLLETSRVAVSKVVAGSKEFWSEVSLNDFTTFALRNKVLIGIFVASLGAA
Subject   3681  GLVARGAATKAFSGITSFFSTGSLFYDRGLAEDERLDALVRTENAINSPVGLLETSRVAVSKVVAGSKEFWSEVSLNDFTTFALRNKVLIGIFVASLGAA  3980

Range 7: 3791 to 3982 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.4 bits(314) 0.0 64/64(100%) 0/64(0%) Plus/Minus
Query        1  GAAPKDATKIPISTLFRNAKVVKSFKETSLQNSFDPATTLLTATRDVSSKPTGEFIAFSVRTRA  192
                GAAPKDATKIPISTLFRNAKVVKSFKETSLQNSFDPATTLLTATRDVSSKPTGEFIAFSVRTRA
Subject   3791  GAAPKDATKIPISTLFRNAKVVKSFKETSLQNSFDPATTLLTATRDVSSKPTGEFIAFSVRTRA  3982

Range 8: 3680 to 3748 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.6 bits(119) 0.0 23/23(100%) 0/23(0%) Plus/Minus
Query      235  EPVEKNDVMPEKAFVAAPRATKP  303
                EPVEKNDVMPEKAFVAAPRATKP
Subject   3680  EPVEKNDVMPEKAFVAAPRATKP  3748

Grapevine leafroll associated virus 3 isolate 623, complete genome

Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 8

Range 1: 3691 to 3981 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
230.6 bits(497) 0.0 96/97(99%) 0/97(0%) Minus/Plus
Query        2  LVGLRRRPFLALRRSFPQVHYSTTAV*LKMKGLMLWCAQRML*THRWAYWRRRV*L*AR**LDRKNFGVKFP*MTLLPLHCGIRCLLGFLWRLWVRP  292
                LVGLRRRPFLALRRSFPQVHYSTTAV*LKMKGLMLWCAQRML*THRWAYWRRRV*L*AR**LDRKNFGVKFP*MTLLPL+CGIRCLLGFLWRLWVRP
Subject   3691  LVGLRRRPFLALRRSFPQVHYSTTAV*LKMKGLMLWCAQRML*THRWAYWRRRV*L*AR**LDRKNFGVKFP*MTLLPLYCGIRCLLGFLWRLWVRP  3981

Range 2: 3681 to 3980 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
226.5 bits(488) 0.0 97/100(97%) 0/100(0%) Plus/Minus
Query        3  GRTQRRHKNPNKHLIPQCKGSKVIQGNFTPKFFRSSYYLAHSYTRRLQ*AHR*VYSILCAHQSIKPFIFS*TAVVE**TCGKERRNARKGLRRSPTSY*T  302
                GRTQRRHKNPNKHLIPQ KGSKVIQGNFTPKFFRSSYYLAHSYTRRLQ*AHR*VYSILCAHQSIKPFIFS*TAVVE**TCGKERRNARKGLRRSPTS+ T
Subject   3681  GRTQRRHKNPNKHLIPQYKGSKVIQGNFTPKFFRSSYYLAHSYTRRLQ*AHR*VYSILCAHQSIKPFIFS*TAVVE**TCGKERRNARKGLRRSPTSHQT  3980

Range 3: 3680 to 3889 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
176.1 bits(378) 0.0 68/70(97%) 0/70(0%) Minus/Plus
Query       94  GFSSSWGCDEGLFWHYVVLFHRFTILRPRFN*R*KA*CSGAHRECYKLTGGLTGDVACSCEQGSSWIERI  303
                GF  SWGCDEGLFWHYVVLFHRFTILRPRFN*R*KA*CSGAHRECYKLTGGLTGDVACSCEQGSSWIERI
Subject   3680  GFGGSWGCDEGLFWHYVVLFHRFTILRPRFN*R*KA*CSGAHRECYKLTGGLTGDVACSCEQGSSWIERI  3889

Range 4: 3926 to 3982 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.1 bits(116) 0.0 19/19(100%) 0/19(0%) Minus/Plus
Query        1  CIAE*GAYWDFCGVFGCGP  57
                CIAE*GAYWDFCGVFGCGP
Subject   3926  CIAE*GAYWDFCGVFGCGP  3982

Range 5: 3691 to 3981 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
208.6 bits(449) 0.0 96/97(99%) 0/97(0%) Plus/Minus
Query        2  GPHPKTPQKSQ*APYSAMQR**SHSRKLHSKILSIQLLPCSQLHATXXXXXXXXL*HSLCAPEHQAFHLQLNRGRRIVNLWKRTT*CQKRPSSQPHE  292
                GPHPKTPQKSQ*APYSA+QR**SHSRKLHSKILSIQLLPCSQLHATSPVSPPVSL*HSLCAPEHQAFHLQLNRGRRIVNLWKRTT*CQKRPSSQPHE
Subject   3691  GPHPKTPQKSQ*APYSAIQR**SHSRKLHSKILSIQLLPCSQLHATSPVSPPVSL*HSLCAPEHQAFHLQLNRGRRIVNLWKRTT*CQKRPSSQPHE  3981

Range 6: 3681 to 3980 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
185.1 bits(399) 0.0 99/100(99%) 0/100(0%) Minus/Plus
Query        3  GLVARGAATKAXXXXXXXXXXXXXFYDRGLTEDERLDALVRTENAINSPVGLLETSRVAVSKVVAGSKEFWSEVSLNDFTTFALRNKVLIGIFVASLGAA  302
                GLVARGAATKAFSGITSFFSTGSLFYDRGLTEDERLDALVRTENAINSPVGLLETSRVAVSKVVAGSKEFWSEVSLNDFTTF LRNKVLIGIFVASLGAA
Subject   3681  GLVARGAATKAFSGITSFFSTGSLFYDRGLTEDERLDALVRTENAINSPVGLLETSRVAVSKVVAGSKEFWSEVSLNDFTTFVLRNKVLIGIFVASLGAA  3980

Range 7: 3791 to 3982 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
142.6 bits(310) 0.0 63/64(98%) 0/64(0%) Plus/Minus
Query        1  GAAPKDATKIPISTLFRNAKVVKSFKETSLQNSFDPATTLLTATRDVSSKPTGEFIAFSVRTRA  192
                GAAPKDATKIPISTLFRN KVVKSFKETSLQNSFDPATTLLTATRDVSSKPTGEFIAFSVRTRA
Subject   3791  GAAPKDATKIPISTLFRNTKVVKSFKETSLQNSFDPATTLLTATRDVSSKPTGEFIAFSVRTRA  3982

Range 8: 3680 to 3748 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.6 bits(119) 0.0 23/23(100%) 0/23(0%) Plus/Minus
Query      235  EPVEKNDVMPEKAFVAAPRATKP  303
                EPVEKNDVMPEKAFVAAPRATKP
Subject   3680  EPVEKNDVMPEKAFVAAPRATKP  3748

Grapevine leafroll associated virus 3 isolate TC BR, complete genome

Sequence ID: KX756668.1 Length: 18498 Number of Matches: 8

Range 1: 3688 to 3981 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
227.9 bits(491) 0.0 95/98(97%) 0/98(0%) Minus/Plus
Query        2  *LVGLRRRPFLALRRSFPQVHYSTTAV*LKMKGLMLWCAQRML*THRWAYWRRRV*L*AR**LDRKNFGVKFP*MTLLPLHCGIRCLLGFLWRLWVRP  295
                *LVGLRRRPFLALRRSFPQVHYSTTAV*LKMKGLMLWCAQRML*THRWAYWRRR+*L*AR**LDRKNFGVKFP*MTLLPL+CGIRC LGFLWRLWVRP
Subject   3688  *LVGLRRRPFLALRRSFPQVHYSTTAV*LKMKGLMLWCAQRML*THRWAYWRRRM*L*AR**LDRKNFGVKFP*MTLLPLYCGIRCFLGFLWRLWVRP  3981

Range 2: 3681 to 3980 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
223.3 bits(481) 0.0 96/100(96%) 0/100(0%) Plus/Minus
Query        3  GRTQRRHKNPNKHLIPQCKGSKVIQGNFTPKFFRSSYYLAHSYTRRLQ*AHR*VYSILCAHQSIKPFIFS*TAVVE**TCGKERRNARKGLRRSPTSY*T  302
                GRTQRRHKNP KHLIPQ KGSKVIQGNFTPKFFRSSYYLAHSY RRLQ*AHR*VYSILCAHQSIKPFIFS*TAVVE**TCGKERRNARKGLRRSPTSY T
Subject   3681  GRTQRRHKNPKKHLIPQYKGSKVIQGNFTPKFFRSSYYLAHSYMRRLQ*AHR*VYSILCAHQSIKPFIFS*TAVVE**TCGKERRNARKGLRRSPTSYQT  3980

Range 3: 3682 to 3981 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
209.6 bits(451) 0.0 97/100(97%) 0/100(0%) Plus/Minus
Query        2  GPHPKTPQKSQ*APYSAMQR**SHSRKLHSKILSIQLLPCSQLHATXXXXXXXXL*HSLCAPEHQAFHLQLNRGRRIVNLWKRTT*CQKRPSSQPHELLN  301
                GPHPKTPQKSQ APYSA+QR**SHSRKLHSKILSIQLLPCSQLHATSPVSPPVSL*HSLCAPEHQAFHLQLNRGRRIVNLWKRTT*CQKRPSSQPHEL N
Subject   3682  GPHPKTPQKSQEAPYSAIQR**SHSRKLHSKILSIQLLPCSQLHATSPVSPPVSL*HSLCAPEHQAFHLQLNRGRRIVNLWKRTT*CQKRPSSQPHELPN  3981

Range 4: 3680 to 3889 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
177.9 bits(382) 0.0 69/70(99%) 0/70(0%) Minus/Plus
Query       94  GFSSSWGCDEGLFWHYVVLFHRFTILRPRFN*R*KA*CSGAHRECYKLTGGLTGDVACSCEQGSSWIERI  303
                GF SSWGCDEGLFWHYVVLFHRFTILRPRFN*R*KA*CSGAHRECYKLTGGLTGDVACSCEQGSSWIERI
Subject   3680  GFGSSWGCDEGLFWHYVVLFHRFTILRPRFN*R*KA*CSGAHRECYKLTGGLTGDVACSCEQGSSWIERI  3889

Range 5: 3926 to 3982 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.9 bits(107) 0.0 18/19(95%) 0/19(0%) Minus/Plus
Query        1  CIAE*GAYWDFCGVFGCGP  57
                CIAE*GA WDFCGVFGCGP
Subject   3926  CIAE*GASWDFCGVFGCGP  3982

Range 6: 3681 to 3980 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
181.9 bits(392) 0.0 97/100(97%) 0/100(0%) Minus/Plus
Query        3  GLVARGAATKAXXXXXXXXXXXXXFYDRGLTEDERLDALVRTENAINSPVGLLETSRVAVSKVVAGSKEFWSEVSLNDFTTFALRNKVLIGIFVASLGAA  302
                GLVARGAATKAFSGITSFFSTGSLFYDRGLTEDERLDALVRTENAINSPVGLLETS VAVSKVVAGSKEFWSEVSLNDFTTF LRNKVL+GIFVASLGAA
Subject   3681  GLVARGAATKAFSGITSFFSTGSLFYDRGLTEDERLDALVRTENAINSPVGLLETSHVAVSKVVAGSKEFWSEVSLNDFTTFVLRNKVLLGIFVASLGAA  3980

Range 7: 3791 to 3982 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
135.8 bits(295) 0.0 61/64(95%) 0/64(0%) Plus/Minus
Query        1  GAAPKDATKIPISTLFRNAKVVKSFKETSLQNSFDPATTLLTATRDVSSKPTGEFIAFSVRTRA  192
                GAAPKDATKIP STLFRN KVVKSFKETSLQNSFDPATTLLTAT DVSSKPTGEFIAFSVRTRA
Subject   3791  GAAPKDATKIPRSTLFRNTKVVKSFKETSLQNSFDPATTLLTATCDVSSKPTGEFIAFSVRTRA  3982

Range 8: 3680 to 3748 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.6 bits(119) 0.0 23/23(100%) 0/23(0%) Plus/Minus
Query      235  EPVEKNDVMPEKAFVAAPRATKP  303
                EPVEKNDVMPEKAFVAAPRATKP
Subject   3680  EPVEKNDVMPEKAFVAAPRATKP  3748

Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome

Sequence ID: KX701860.1 Length: 18020 Number of Matches: 8

Range 1: 3206 to 3499 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
225.6 bits(486) 0.0 95/98(97%) 0/98(0%) Minus/Plus
Query        2  *LVGLRRRPFLALRRSFPQVHYSTTAV*LKMKGLMLWCAQRML*THRWAYWRRRV*L*AR**LDRKNFGVKFP*MTLLPLHCGIRCLLGFLWRLWVRP  295
                *LVGLRRRPFLALRRSFPQVHYSTTAV*LKMKGLMLWCAQRML*THRWAYWRRRV*L*AR**LDRKNFGVKFP*MTLLPL+C IRCLLGFLWRLWV+P
Subject   3206  *LVGLRRRPFLALRRSFPQVHYSTTAV*LKMKGLMLWCAQRML*THRWAYWRRRV*L*AR**LDRKNFGVKFP*MTLLPLYCRIRCLLGFLWRLWVQP  3499

Range 2: 3199 to 3498 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
220.5 bits(475) 0.0 96/100(96%) 0/100(0%) Plus/Minus
Query        3  GRTQRRHKNPNKHLIPQCKGSKVIQGNFTPKFFRSSYYLAHSYTRRLQ*AHR*VYSILCAHQSIKPFIFS*TAVVE**TCGKERRNARKGLRRSPTSY*T  302
                G TQRRHKNPNKHLI Q KGSKVIQGNFTPKFFRSSYYLAHSYTRRLQ*AHR*VYSILCAHQSIKPFIFS*TAVVE**TCGKERRNARKGLRRSPTSY T
Subject   3199  GCTQRRHKNPNKHLILQYKGSKVIQGNFTPKFFRSSYYLAHSYTRRLQ*AHR*VYSILCAHQSIKPFIFS*TAVVE**TCGKERRNARKGLRRSPTSYQT  3498

Range 3: 3198 to 3407 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
177.9 bits(382) 0.0 69/70(99%) 0/70(0%) Minus/Plus
Query       94  GFSSSWGCDEGLFWHYVVLFHRFTILRPRFN*R*KA*CSGAHRECYKLTGGLTGDVACSCEQGSSWIERI  303
                GF SSWGCDEGLFWHYVVLFHRFTILRPRFN*R*KA*CSGAHRECYKLTGGLTGDVACSCEQGSSWIERI
Subject   3198  GFGSSWGCDEGLFWHYVVLFHRFTILRPRFN*R*KA*CSGAHRECYKLTGGLTGDVACSCEQGSSWIERI  3407

Range 4: 3444 to 3500 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.3 bits(110) 0.0 18/19(95%) 0/19(0%) Minus/Plus
Query        1  CIAE*GAYWDFCGVFGCGP  57
                CIAE*GAYWDFCGVFGC P
Subject   3444  CIAE*GAYWDFCGVFGCSP  3500

Range 5: 3200 to 3499 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
207.3 bits(446) 0.0 97/100(97%) 0/100(0%) Plus/Minus
Query        2  GPHPKTPQKSQ*APYSAMQR**SHSRKLHSKILSIQLLPCSQLHATXXXXXXXXL*HSLCAPEHQAFHLQLNRGRRIVNLWKRTT*CQKRPSSQPHELLN  301
                G HPKTPQKSQ*APYSA+QR**SHSRKLHSKILSIQLLPCSQLHATSPVSPPVSL*HSLCAPEHQAFHLQLNRGRRIVNLWKRTT*CQKRPSSQPHEL N
Subject   3200  GLHPKTPQKSQ*APYSAIQR**SHSRKLHSKILSIQLLPCSQLHATSPVSPPVSL*HSLCAPEHQAFHLQLNRGRRIVNLWKRTT*CQKRPSSQPHELPN  3499

Range 6: 3199 to 3498 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
183.2 bits(395) 0.0 98/100(98%) 0/100(0%) Minus/Plus
Query        3  GLVARGAATKAXXXXXXXXXXXXXFYDRGLTEDERLDALVRTENAINSPVGLLETSRVAVSKVVAGSKEFWSEVSLNDFTTFALRNKVLIGIFVASLGAA  302
                GLVARGAATKAFSGITSFFSTGSLFYDRGLTEDERLDALVRTENAINSPVGLLETSRVAVSKVVAGSKEFWSEVSLNDFTTF L+NKVLIGIFVASLGAA
Subject   3199  GLVARGAATKAFSGITSFFSTGSLFYDRGLTEDERLDALVRTENAINSPVGLLETSRVAVSKVVAGSKEFWSEVSLNDFTTFVLQNKVLIGIFVASLGAA  3498

Range 7: 3309 to 3500 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
139.0 bits(302) 0.0 62/64(97%) 0/64(0%) Plus/Minus
Query        1  GAAPKDATKIPISTLFRNAKVVKSFKETSLQNSFDPATTLLTATRDVSSKPTGEFIAFSVRTRA  192
                GAAPKDATKIPISTLF N KVVKSFKETSLQNSFDPATTLLTATRDVSSKPTGEFIAFSVRTRA
Subject   3309  GAAPKDATKIPISTLFCNTKVVKSFKETSLQNSFDPATTLLTATRDVSSKPTGEFIAFSVRTRA  3500

Range 8: 3198 to 3266 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.6 bits(119) 0.0 23/23(100%) 0/23(0%) Plus/Minus
Query      235  EPVEKNDVMPEKAFVAAPRATKP  303
                EPVEKNDVMPEKAFVAAPRATKP
Subject   3198  EPVEKNDVMPEKAFVAAPRATKP  3266

Grapevine leafroll associated virus 3, complete genome

Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 8

Range 1: 3688 to 3981 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
225.1 bits(485) 0.0 95/98(97%) 0/98(0%) Minus/Plus
Query        2  *LVGLRRRPFLALRRSFPQVHYSTTAV*LKMKGLMLWCAQRML*THRWAYWRRRV*L*AR**LDRKNFGVKFP*MTLLPLHCGIRCLLGFLWRLWVRP  295
                *LVGLRRRPFLALRRSFPQVHYSTTAV*LKMKGLMLWCAQ ML*THRWAYWRRRV*L*AR**LDRKN GVKFP*MTLLPL+CGIRCLLGFLWRLWVRP
Subject   3688  *LVGLRRRPFLALRRSFPQVHYSTTAV*LKMKGLMLWCAQGML*THRWAYWRRRV*L*AR**LDRKNLGVKFP*MTLLPLYCGIRCLLGFLWRLWVRP  3981

Range 2: 3681 to 3980 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
224.2 bits(483) 0.0 96/100(96%) 0/100(0%) Plus/Minus
Query        3  GRTQRRHKNPNKHLIPQCKGSKVIQGNFTPKFFRSSYYLAHSYTRRLQ*AHR*VYSILCAHQSIKPFIFS*TAVVE**TCGKERRNARKGLRRSPTSY*T  302
                GRTQRRHKNPNKHLIPQ KGSKVIQGNFTP+FFRSSYYLAHSYTRRLQ*AHR*VYSI CAHQSIKPFIFS*TAVVE**TCGKERRNARKGLRRSPTSY T
Subject   3681  GRTQRRHKNPNKHLIPQYKGSKVIQGNFTPRFFRSSYYLAHSYTRRLQ*AHR*VYSIPCAHQSIKPFIFS*TAVVE**TCGKERRNARKGLRRSPTSYQT  3980

Range 3: 3680 to 3889 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
177.9 bits(382) 0.0 69/70(99%) 0/70(0%) Minus/Plus
Query       94  GFSSSWGCDEGLFWHYVVLFHRFTILRPRFN*R*KA*CSGAHRECYKLTGGLTGDVACSCEQGSSWIERI  303
                GF SSWGCDEGLFWHYVVLFHRFTILRPRFN*R*KA*CSGAHRECYKLTGGLTGDVACSCEQGSSWIERI
Subject   3680  GFGSSWGCDEGLFWHYVVLFHRFTILRPRFN*R*KA*CSGAHRECYKLTGGLTGDVACSCEQGSSWIERI  3889

Range 4: 3926 to 3982 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.1 bits(116) 0.0 19/19(100%) 0/19(0%) Minus/Plus
Query        1  CIAE*GAYWDFCGVFGCGP  57
                CIAE*GAYWDFCGVFGCGP
Subject   3926  CIAE*GAYWDFCGVFGCGP  3982

Range 5: 3682 to 3981 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
211.8 bits(456) 0.0 98/100(98%) 0/100(0%) Plus/Minus
Query        2  GPHPKTPQKSQ*APYSAMQR**SHSRKLHSKILSIQLLPCSQLHATXXXXXXXXL*HSLCAPEHQAFHLQLNRGRRIVNLWKRTT*CQKRPSSQPHELLN  301
                GPHPKTPQKSQ*APYSA+QR**SHSRKLHSKILSIQLLPCSQLHATSPVSPPVSL*HSLCAPEHQAFHLQLNRGRRIVNLWKRTT*CQKRPSSQPHEL N
Subject   3682  GPHPKTPQKSQ*APYSAIQR**SHSRKLHSKILSIQLLPCSQLHATSPVSPPVSL*HSLCAPEHQAFHLQLNRGRRIVNLWKRTT*CQKRPSSQPHELPN  3981

Range 6: 3681 to 3980 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
178.2 bits(384) 0.0 97/100(97%) 0/100(0%) Minus/Plus
Query        3  GLVARGAATKAXXXXXXXXXXXXXFYDRGLTEDERLDALVRTENAINSPVGLLETSRVAVSKVVAGSKEFWSEVSLNDFTTFALRNKVLIGIFVASLGAA  302
                GLVARGAATKAFSGITSFFSTGSLFYDRGLTEDERLDALVRT NAINSPVGLLETSRVAVSKVVAGSKE WSEVSLNDFTTF LRNKVLIGIFVASLGAA
Subject   3681  GLVARGAATKAFSGITSFFSTGSLFYDRGLTEDERLDALVRTGNAINSPVGLLETSRVAVSKVVAGSKESWSEVSLNDFTTFVLRNKVLIGIFVASLGAA  3980

Range 7: 3791 to 3982 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
138.1 bits(300) 0.0 61/64(95%) 0/64(0%) Plus/Minus
Query        1  GAAPKDATKIPISTLFRNAKVVKSFKETSLQNSFDPATTLLTATRDVSSKPTGEFIAFSVRTRA  192
                GAAPKDATKIPISTLFRN KVVKSFKETSLQ+SFDPATTLLTATRDVSSKPTGEFIAF VRTRA
Subject   3791  GAAPKDATKIPISTLFRNTKVVKSFKETSLQDSFDPATTLLTATRDVSSKPTGEFIAFPVRTRA  3982

Range 8: 3680 to 3748 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.6 bits(119) 0.0 23/23(100%) 0/23(0%) Plus/Minus
Query      235  EPVEKNDVMPEKAFVAAPRATKP  303
                EPVEKNDVMPEKAFVAAPRATKP
Subject   3680  EPVEKNDVMPEKAFVAAPRATKP  3748

Nucleotide Sequence (566 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
57
114
171
228
285
342
399
456
513
566

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
391.0 2240.3 28% 6.687e-107 81% JX559645.1
391.0 2225.7 28% 6.687e-107 81% NC_004667.1
391.0 2225.7 28% 6.687e-107 81% AF037268.2
391.0 2212.8 28% 6.687e-107 81% GQ352631.1
391.0 2240.3 28% 6.687e-107 81% GU983863.1

Alignments

Grapevine leafroll associated virus 3 isolate 3138 07, complete genome

Sequence ID: JX559645.1 Length: 18498 Number of Matches: 7

Range 1: 13240 to 13734 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
391.0 bits(847) 0.0 163/165(99%) 0/165(0%) Plus/Plus
Query        1  EMTTGKGGKICPEIAEKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGKVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNENQATG  495
                EMTTGKGGKICPEIAEKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKG+VEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNENQ TG
Subject  13240  EMTTGKGGKICPEIAEKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGRVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNENQVTG  13734

Range 2: 13242 to 13748 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
384.6 bits(833) 0.0 164/169(97%) 0/169(0%) Plus/Plus
Query        3  DDDR*RGKDMPGDRREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRRYVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERKPGDRTTKHT  509
                DDDR*RGKDMPGDRREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRRYVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERKPG R    T
Subject  13242  DDDR*RGKDMPGDRREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRRYVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERKPGYRNYSTT  13748

Range 3: 13241 to 13732 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
383.2 bits(830) 0.0 163/164(99%) 0/164(0%) Minus/Minus
Query        2  RSPGFRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTYRLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTSRRSPGISFPLYLSSS  493
                R PGFRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTYRLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTSRRSPGISFPLYLSSS
Subject  13241  R*PGFRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTYRLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTSRRSPGISFPLYLSSS  13732

Range 4: 13240 to 13734 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
382.3 bits(828) 0.0 163/165(99%) 0/165(0%) Minus/Minus
Query        1  SGRLVFVRLDIVYNASVICGVDRISHLRSYTISRVIR*RTVYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLDFSLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLLGDLRAYLSPFTCRHL  495
                SG LVFVRLDIVYNASVICGVDRISHLRSYTISRVIR*RTVYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLD SLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLLGDLRAYLSPFTCRHL
Subject  13240  SGNLVFVRLDIVYNASVICGVDRISHLRSYTISRVIR*RTVYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLDSSLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLLGDLRAYLSPFTCRHL  13734

Range 5: 13242 to 13733 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
355.3 bits(769) 0.0 162/164(99%) 0/164(0%) Minus/Minus
Query        3  PVAWFSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTFPFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVI  494
                PV WFSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFST PFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVI
Subject  13242  PVTWFSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTLPFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVI  13733

Range 6: 13241 to 13633 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
295.2 bits(638) 0.0 130/131(99%) 0/131(0%) Plus/Plus
Query        2  R*RQVKGERYARRSPRSWCAV*WRKTIS*D*PQ*WP**LYWYTTPFTAQTLPGLKDARISSM*G*REKSRRFRYGG*KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIGRR*VM*TVR*RMT  394
                R*RQVKGERYARRSPRSWCAV*WRKTIS*D*PQ*WP**LYWYTTPFTAQTLPGLKDARISSM*G*RE+SRRFRYGG*KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIGRR*VM*TVR*RMT
Subject  13241  R*RQVKGERYARRSPRSWCAV*WRKTIS*D*PQ*WP**LYWYTTPFTAQTLPGLKDARISSM*G*REESRRFRYGG*KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIGRR*VM*TVR*RMT  13633

Range 7: 13670 to 13747 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 21/26(81%) 0/26(0%) Plus/Plus
Query      431  STPQITLALYTISRRTKTRRPDHQTH  508
                STPQITLALYTISRRTKTR P+   H
Subject  13670  STPQITLALYTISRRTKTRLPELLYH  13747

Grapevine leafroll associated virus 3, complete genome

Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 7

Range 1: 12661 to 13155 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
391.0 bits(847) 0.0 163/165(99%) 0/165(0%) Plus/Plus
Query        1  EMTTGKGGKICPEIAEKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGKVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNENQATG  495
                EMTTGKGGKICPEIAEKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKG+VEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNENQ TG
Subject  12661  EMTTGKGGKICPEIAEKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGRVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNENQVTG  13155

Range 2: 12663 to 13169 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
380.0 bits(823) 0.0 163/169(96%) 0/169(0%) Plus/Plus
Query        3  DDDR*RGKDMPGDRREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRRYVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERKPGDRTTKHT  509
                DDDR*RGKDMPGDRREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRR VSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERKPG R    T
Subject  12663  DDDR*RGKDMPGDRREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRRDVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERKPGYRNYSTT  13169

Range 3: 12661 to 13155 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
379.5 bits(822) 0.0 162/165(98%) 0/165(0%) Minus/Minus
Query        1  SGRLVFVRLDIVYNASVICGVDRISHLRSYTISRVIR*RTVYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLDFSLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLLGDLRAYLSPFTCRHL  495
                SG LVFVRLDIVYNASVICGVDRISHLRSYTISRVIR*R VYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLD SLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLLGDLRAYLSPFTCRHL
Subject  12661  SGNLVFVRLDIVYNASVICGVDRISHLRSYTISRVIR*RPVYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLDSSLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLLGDLRAYLSPFTCRHL  13155

Range 4: 12662 to 13153 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
379.1 bits(821) 0.0 162/164(99%) 0/164(0%) Minus/Minus
Query        2  RSPGFRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTYRLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTSRRSPGISFPLYLSSS  493
                R PGFRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLT RLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTSRRSPGISFPLYLSSS
Subject  12662  R*PGFRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTSRLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTSRRSPGISFPLYLSSS  13153

Range 5: 12663 to 13154 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
355.3 bits(769) 0.0 162/164(99%) 0/164(0%) Minus/Minus
Query        3  PVAWFSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTFPFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVI  494
                PV WFSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFST PFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVI
Subject  12663  PVTWFSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTLPFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVI  13154

Range 6: 12662 to 13054 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
292.0 bits(631) 0.0 129/131(98%) 0/131(0%) Plus/Plus
Query        2  R*RQVKGERYARRSPRSWCAV*WRKTIS*D*PQ*WP**LYWYTTPFTAQTLPGLKDARISSM*G*REKSRRFRYGG*KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIGRR*VM*TVR*RMT  394
                R*RQVKGERYARRSPRSWCAV*WRKTIS*D*PQ*WP**LYWYTTPFTAQTLPGLKDARISSM*G*RE+SRRFRYGG*KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIGRR*VM*T R*RMT
Subject  12662  R*RQVKGERYARRSPRSWCAV*WRKTIS*D*PQ*WP**LYWYTTPFTAQTLPGLKDARISSM*G*REESRRFRYGG*KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIGRR*VM*TGR*RMT  13054

Range 7: 13091 to 13168 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 21/26(81%) 0/26(0%) Plus/Plus
Query      431  STPQITLALYTISRRTKTRRPDHQTH  508
                STPQITLALYTISRRTKTR P+   H
Subject  13091  STPQITLALYTISRRTKTRLPELLYH  13168

Grapevine leafroll associated virus 3, complete genome

Sequence ID: AF037268.2 Length: 17919 Number of Matches: 7

Range 1: 12661 to 13155 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
391.0 bits(847) 0.0 163/165(99%) 0/165(0%) Plus/Plus
Query        1  EMTTGKGGKICPEIAEKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGKVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNENQATG  495
                EMTTGKGGKICPEIAEKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKG+VEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNENQ TG
Subject  12661  EMTTGKGGKICPEIAEKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGRVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNENQVTG  13155

Range 2: 12663 to 13169 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
380.0 bits(823) 0.0 163/169(96%) 0/169(0%) Plus/Plus
Query        3  DDDR*RGKDMPGDRREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRRYVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERKPGDRTTKHT  509
                DDDR*RGKDMPGDRREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRR VSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERKPG R    T
Subject  12663  DDDR*RGKDMPGDRREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRRDVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERKPGYRNYSTT  13169

Range 3: 12661 to 13155 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
379.5 bits(822) 0.0 162/165(98%) 0/165(0%) Minus/Minus
Query        1  SGRLVFVRLDIVYNASVICGVDRISHLRSYTISRVIR*RTVYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLDFSLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLLGDLRAYLSPFTCRHL  495
                SG LVFVRLDIVYNASVICGVDRISHLRSYTISRVIR*R VYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLD SLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLLGDLRAYLSPFTCRHL
Subject  12661  SGNLVFVRLDIVYNASVICGVDRISHLRSYTISRVIR*RPVYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLDSSLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLLGDLRAYLSPFTCRHL  13155

Range 4: 12662 to 13153 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
379.1 bits(821) 0.0 162/164(99%) 0/164(0%) Minus/Minus
Query        2  RSPGFRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTYRLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTSRRSPGISFPLYLSSS  493
                R PGFRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLT RLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTSRRSPGISFPLYLSSS
Subject  12662  R*PGFRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTSRLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTSRRSPGISFPLYLSSS  13153

Range 5: 12663 to 13154 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
355.3 bits(769) 0.0 162/164(99%) 0/164(0%) Minus/Minus
Query        3  PVAWFSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTFPFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVI  494
                PV WFSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFST PFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVI
Subject  12663  PVTWFSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTLPFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVI  13154

Range 6: 12662 to 13054 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
292.0 bits(631) 0.0 129/131(98%) 0/131(0%) Plus/Plus
Query        2  R*RQVKGERYARRSPRSWCAV*WRKTIS*D*PQ*WP**LYWYTTPFTAQTLPGLKDARISSM*G*REKSRRFRYGG*KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIGRR*VM*TVR*RMT  394
                R*RQVKGERYARRSPRSWCAV*WRKTIS*D*PQ*WP**LYWYTTPFTAQTLPGLKDARISSM*G*RE+SRRFRYGG*KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIGRR*VM*T R*RMT
Subject  12662  R*RQVKGERYARRSPRSWCAV*WRKTIS*D*PQ*WP**LYWYTTPFTAQTLPGLKDARISSM*G*REESRRFRYGG*KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIGRR*VM*TGR*RMT  13054

Range 7: 13091 to 13168 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 21/26(81%) 0/26(0%) Plus/Plus
Query      431  STPQITLALYTISRRTKTRRPDHQTH  508
                STPQITLALYTISRRTKTR P+   H
Subject  13091  STPQITLALYTISRRTKTRLPELLYH  13168

Grapevine leafroll associated virus 3 isolate 621, complete genome

Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 7

Range 1: 13240 to 13734 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
391.0 bits(847) 0.0 163/165(99%) 0/165(0%) Plus/Plus
Query        1  EMTTGKGGKICPEIAEKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGKVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNENQATG  495
                EMTTGKGGKICPEIAEKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKG+VEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNENQ TG
Subject  13240  EMTTGKGGKICPEIAEKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGRVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNENQVTG  13734

Range 2: 13240 to 13734 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
377.3 bits(817) 0.0 161/165(98%) 0/165(0%) Minus/Minus
Query        1  SGRLVFVRLDIVYNASVICGVDRISHLRSYTISRVIR*RTVYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLDFSLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLLGDLRAYLSPFTCRHL  495
                SG LVFVRLDIVYNASVICGVDRISHLRSYTISRVIR*RTVYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLD SLYPHIEEIRASFNPGS+ AVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLLGDLRAYLSPFTCRHL
Subject  13240  SGNLVFVRLDIVYNASVICGVDRISHLRSYTISRVIR*RTVYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLDSSLYPHIEEIRASFNPGSISAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLLGDLRAYLSPFTCRHL  13734

Range 3: 13241 to 13732 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
377.3 bits(817) 0.0 161/164(98%) 0/164(0%) Minus/Minus
Query        2  RSPGFRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTYRLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTSRRSPGISFPLYLSSS  493
                R PGFRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTYRLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*  CRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTSRRSPGISFPLYLSSS
Subject  13241  R*PGFRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTYRLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*H*CRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTSRRSPGISFPLYLSSS  13732

Range 4: 13242 to 13748 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
376.8 bits(816) 0.0 162/169(96%) 0/169(0%) Plus/Plus
Query        3  DDDR*RGKDMPGDRREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRRYVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERKPGDRTTKHT  509
                DDDR*RGKDMPGDRREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRH  YQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRRYVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERKPG R    T
Subject  13242  DDDR*RGKDMPGDRREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRH*CYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRRYVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERKPGYRNYSTT  13748

Range 5: 13242 to 13733 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
352.5 bits(763) 0.0 161/164(98%) 0/164(0%) Minus/Minus
Query        3  PVAWFSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTFPFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVI  494
                PV WFSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFST PFILTLRKSGRLLILVA VP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVI
Subject  13242  PVTWFSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTLPFILTLRKSGRLLILVALVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVI  13733

Range 6: 13241 to 13633 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
289.3 bits(625) 0.0 128/131(98%) 0/131(0%) Plus/Plus
Query        2  R*RQVKGERYARRSPRSWCAV*WRKTIS*D*PQ*WP**LYWYTTPFTAQTLPGLKDARISSM*G*REKSRRFRYGG*KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIGRR*VM*TVR*RMT  394
                R*RQVKGERYARRSPRSWCAV*WRKTIS*D*PQ*WP**LYWYTTPFTA  LPGLKDARISSM*G*RE+SRRFRYGG*KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIGRR*VM*TVR*RMT
Subject  13241  R*RQVKGERYARRSPRSWCAV*WRKTIS*D*PQ*WP**LYWYTTPFTALMLPGLKDARISSM*G*REESRRFRYGG*KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIGRR*VM*TVR*RMT  13633

Range 7: 13670 to 13747 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 21/26(81%) 0/26(0%) Plus/Plus
Query      431  STPQITLALYTISRRTKTRRPDHQTH  508
                STPQITLALYTISRRTKTR P+   H
Subject  13670  STPQITLALYTISRRTKTRLPELLYH  13747

Grapevine leafroll associated virus 3 isolate WA MR, complete genome

Sequence ID: GU983863.1 Length: 18498 Number of Matches: 7

Range 1: 13240 to 13734 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
391.0 bits(847) 0.0 163/165(99%) 0/165(0%) Plus/Plus
Query        1  EMTTGKGGKICPEIAEKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGKVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNENQATG  495
                EMTTGKGGKICPEIAEKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKG+VEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNENQ TG
Subject  13240  EMTTGKGGKICPEIAEKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGRVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNENQVTG  13734

Range 2: 13242 to 13748 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
384.6 bits(833) 0.0 164/169(97%) 0/169(0%) Plus/Plus
Query        3  DDDR*RGKDMPGDRREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRRYVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERKPGDRTTKHT  509
                DDDR*RGKDMPGDRREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRRYVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERKPG R    T
Subject  13242  DDDR*RGKDMPGDRREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRRYVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERKPGYRNYSTT  13748

Range 3: 13241 to 13732 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
383.2 bits(830) 0.0 163/164(99%) 0/164(0%) Minus/Minus
Query        2  RSPGFRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTYRLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTSRRSPGISFPLYLSSS  493
                R PGFRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTYRLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTSRRSPGISFPLYLSSS
Subject  13241  R*PGFRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTYRLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTSRRSPGISFPLYLSSS  13732

Range 4: 13240 to 13734 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
382.3 bits(828) 0.0 163/165(99%) 0/165(0%) Minus/Minus
Query        1  SGRLVFVRLDIVYNASVICGVDRISHLRSYTISRVIR*RTVYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLDFSLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLLGDLRAYLSPFTCRHL  495
                SG LVFVRLDIVYNASVICGVDRISHLRSYTISRVIR*RTVYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLD SLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLLGDLRAYLSPFTCRHL
Subject  13240  SGNLVFVRLDIVYNASVICGVDRISHLRSYTISRVIR*RTVYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLDSSLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLLGDLRAYLSPFTCRHL  13734

Range 5: 13242 to 13733 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
355.3 bits(769) 0.0 162/164(99%) 0/164(0%) Minus/Minus
Query        3  PVAWFSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTFPFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVI  494
                PV WFSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFST PFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVI
Subject  13242  PVTWFSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTLPFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVI  13733

Range 6: 13241 to 13633 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
295.2 bits(638) 0.0 130/131(99%) 0/131(0%) Plus/Plus
Query        2  R*RQVKGERYARRSPRSWCAV*WRKTIS*D*PQ*WP**LYWYTTPFTAQTLPGLKDARISSM*G*REKSRRFRYGG*KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIGRR*VM*TVR*RMT  394
                R*RQVKGERYARRSPRSWCAV*WRKTIS*D*PQ*WP**LYWYTTPFTAQTLPGLKDARISSM*G*RE+SRRFRYGG*KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIGRR*VM*TVR*RMT
Subject  13241  R*RQVKGERYARRSPRSWCAV*WRKTIS*D*PQ*WP**LYWYTTPFTAQTLPGLKDARISSM*G*REESRRFRYGG*KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIGRR*VM*TVR*RMT  13633

Range 7: 13670 to 13747 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 21/26(81%) 0/26(0%) Plus/Plus
Query      431  STPQITLALYTISRRTKTRRPDHQTH  508
                STPQITLALYTISRRTKTR P+   H
Subject  13670  STPQITLALYTISRRTKTRLPELLYH  13747

Nucleotide Sequence (2006 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
201
402
603
804
1005
1206
1407
1608
1809
2006

Descriptions

Alignments

Grapevine leafroll associated virus 3 isolate 3138 07, complete genome

Sequence ID: JX559645.1 Length: 18498 Number of Matches: 17

Range 1: 5478 to 7481 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1592.0 bits(3468) 0.0 667/668(100%) 0/668(0%) Plus/Plus
Query        2  VSSGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGVTRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPYVFIAEKGIFTKGKDVDAVVALGDNLFVCDDILVFHDAINLIGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGLNSATTVNSRVVNFIVRGMYKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALSSKLDDKVGTYISDASPQSVSDALLHTFAPAGCFRGI*AYEFWTDLRR  2005
                VSSGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQG TRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPYVFIAEKGIFTKGKDVDAVVALGDNLFVCDDILVFHDAINLIGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGLNSATTVNSRVVNFIVRGMYKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALSSKLDDKVGTYISDASPQSVSDALLHTFAPAGCFRGI*AYEFWTDLRR
Subject   5478  VSSGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPYVFIAEKGIFTKGKDVDAVVALGDNLFVCDDILVFHDAINLIGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGLNSATTVNSRVVNFIVRGMYKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALSSKLDDKVGTYISDASPQSVSDALLHTFAPAGCFRGI*AYEFWTDLRR  7481

Range 2: 5478 to 7481 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1554.4 bits(3386) 0.0 661/668(99%) 0/668(0%) Minus/Minus
Query        2  PSKVGPKFIRSYTSKATSRGERVKQSVGY*LR*RVANICADLIVQL*AQSGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQXXXXXXXXXXXXXSNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFIHSPDDKVYHPGVNCGSTVETFQIRISLLHRHIYVLRTSHISRNGGCAIG*LNEFVH*HRRLTATWGSIIALIFEGLKRFAHHAASSDFQCTYQINGIVENQYIVAYEQIVAQSYHRVDIFALSKDTFFSYEYVR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDGYISSHKQRPVRPLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRFWCDCSGNTLALWLLVWNTW*FLIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTRPP**N  2005
                PSKVGPKFIRSYTSKATSRGERVKQSVGY*LR*RVANICADLIVQL*AQSGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVSVYFSYVIS SNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFIHSPDDKVYHPGVNCGSTVETFQIRISLLHRHIYVLRTSHISRNGGCAIG*LNEFVH*HRRLTATWGSIIALIFEGLKRFAHHAASSDFQCTYQINGIVENQYIVAYEQIVAQSYHRVDIFALSKDTFFSYEYVR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDG ISSHKQRPV PLNAYSQILQVLHDGIFRGPGFNHFKCHWG+VRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAP FWCDCSG+TLALWLLVWNTW* LIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTRPP**N
Subject   5478  PSKVGPKFIRSYTSKATSRGERVKQSVGY*LR*RVANICADLIVQL*AQSGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVSVYFSYVISGSNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFIHSPDDKVYHPGVNCGSTVETFQIRISLLHRHIYVLRTSHISRNGGCAIG*LNEFVH*HRRLTATWGSIIALIFEGLKRFAHHAASSDFQCTYQINGIVENQYIVAYEQIVAQSYHRVDIFALSKDTFFSYEYVR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDGNISSHKQRPVCPLNAYSQILQVLHDGIFRGPGFNHFKCHWGIVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAP*FWCDCSGSTLALWLLVWNTW*LLIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTRPP**N  7481

Range 3: 5477 to 7021 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1170.0 bits(2547) 0.0 514/515(100%) 0/515(0%) Minus/Minus
Query        1  FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLYIPLTIKFTTLELTVVALLRPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTNIVVLPPPGGAL*HLYSKDLNDSPTMPHRATFSAPIKLMASWKTSISSHTNRLSPKATTASTSLPLVKIPFSAMNTYGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDXXXXXXXXXSDRALPPDFGVIVLVTPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDET  1545
                FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLYIPLTIKFTTLELTVVALLRPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTNIVVLPPPGGAL*HLYSKDLNDSPTMPHRATFSAPIKLMASWKTSISSHTNRLSPKATTASTSLPLVKIPFSAMNTYGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLV PWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDET
Subject   5477  FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLYIPLTIKFTTLELTVVALLRPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTNIVVLPPPGGAL*HLYSKDLNDSPTMPHRATFSAPIKLMASWKTSISSHTNRLSPKATTASTSLPLVKIPFSAMNTYGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDET  7021

Range 4: 5479 to 6639 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
883.1 bits(1921) 0.0 382/387(99%) 0/387(0%) Plus/Plus
Query        3  FHQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRNHQVFQTSNHRAKVLPEQSHQNRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRGRTGRCLWLEI*PSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRTYS*LKKVSLLRAKMSTRW*LWATICSYATIYWFSTMPLI**VH*KSLDAAWWANRLSPSNISAIMLPQVAVRRRC*WTNSLSHPIAQPPLRLMWEVL  1163
                FHQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMR+HQVFQTSNHRAKVLPEQSHQN+GARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLT PQ*HLKWLKPGPLKMPSWST*SIWL*ALRG TGRCLWLEI PSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRTYS*LKKVSLLRAKMSTRW*LWATICSYATIYWFSTMPLI**VH*KSLDAAWWANRLSPSNISAIMLPQVAVRRRC*WTNSLSHPIAQPPLRLMWEVL
Subject   5479  FHQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRSHQVFQTSNHRAKVLPEQSHQNQGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTIPQ*HLKWLKPGPLKMPSWST*SIWL*ALRGHTGRCLWLEILPSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRTYS*LKKVSLLRAKMSTRW*LWATICSYATIYWFSTMPLI**VH*KSLDAAWWANRLSPSNISAIMLPQVAVRRRC*WTNSLSHPIAQPPLRLMWEVL  6639

Range 5: 5674 to 6369 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
509.2 bits(1105) 0.0 227/232(98%) 0/232(0%) Minus/Minus
Query      198  YLFQL*IRTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**RLYF*P*ATPCTSSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLVISHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT  893
                YLFQL*IRTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**R YF*P*ATPC SSQCL*PDTSSTPRRHLQRSRF*PLQMSLG SQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCP ILV*LFW*HLGSVVAGLEHLV SHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT
Subject   5674  YLFQL*IRTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**RQYF*P*ATPCMSSQCL*PDTSSTPRRHLQRSRF*PLQMSLGYSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPLILV*LFW*HLGSVVAGLEHLVTSHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT  6369

Range 6: 6836 to 7480 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
459.7 bits(997) 0.0 214/215(100%) 0/215(0%) Plus/Plus
Query     1360  FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWNY**RS*NKR*RVLVHDPXXXXXXXXXXXXKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRSELKVGR*GRHIY*RRVTSISIRRFASHVRPGWLLSRYMSV*ILDRPSK  2004
                FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWN+**RS*NKR*RVLVHDPVGEVGYEEVVEGKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRSELKVGR*GRHIY*RRVTSISIRRFASHVRPGWLLSRYMSV*ILDRPSK
Subject   6836  FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWNH**RS*NKR*RVLVHDPVGEVGYEEVVEGKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRSELKVGR*GRHIY*RRVTSISIRRFASHVRPGWLLSRYMSV*ILDRPSK  7480

Range 7: 5477 to 5935 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
364.0 bits(788) 0.0 152/153(99%) 0/153(0%) Plus/Plus
Query        1  CFIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EITRCSKPATTEPRCYQNNHT  459
                CFIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*E+TRCSKPATTEPRCYQNNHT
Subject   5477  CFIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EVTRCSKPATTEPRCYQNNHT  5935

Range 8: 6281 to 6736 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
332.4 bits(719) 0.0 152/152(100%) 0/152(0%) Plus/Plus
Query      805  QVGHRSHFSFNTRRLACERPTVRIHS*KRYLY*GQRCRRGGSFGRQSVRMRRYTGFPRCH*FDRCTESRSMRHGGRIV*VLRI*VL*CSPRWR*DDDVSGRIR*VTQ*HSHHYG*CGKF*GHKYXXXXXXXXXXXXQQCYHS*LQGGKLYRQ  1260
                QVGHRSHFSFNTRRLACERPTVRIHS*KRYLY*GQRCRRGGSFGRQSVRMRRYTGFPRCH*FDRCTESRSMRHGGRIV*VLRI*VL*CSPRWR*DDDVSGRIR*VTQ*HSHHYG*CGKF*GHKYGGEEERSEFGRSQQCYHS*LQGGKLYRQ
Subject   6281  QVGHRSHFSFNTRRLACERPTVRIHS*KRYLY*GQRCRRGGSFGRQSVRMRRYTGFPRCH*FDRCTESRSMRHGGRIV*VLRI*VL*CSPRWR*DDDVSGRIR*VTQ*HSHHYG*CGKF*GHKYGGEEERSEFGRSQQCYHS*LQGGKLYRQ  6736

Range 9: 7073 to 7480 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
320.0 bits(692) 0.0 136/136(100%) 0/136(0%) Minus/Minus
Query     1597  LRRSVQNSYAHIPRKQPAGANV*SKASDTD*GDASLIYVPTLSSNFELRAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI  2004
                LRRSVQNSYAHIPRKQPAGANV*SKASDTD*GDASLIYVPTLSSNFELRAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI
Subject   7073  LRRSVQNSYAHIPRKQPAGANV*SKASDTD*GDASLIYVPTLSSNFELRAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI  7480

Range 10: 6679 to 7074 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
315.4 bits(682) 0.0 132/132(100%) 0/132(0%) Plus/Plus
Query     1203  WKVSTVLPQLTPGW*TLSSGECIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQ  1598
                WKVSTVLPQLTPGW*TLSSGECIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQ
Subject   6679  WKVSTVLPQLTPGW*TLSSGECIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQ  7074

Range 11: 6691 to 7065 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
276.0 bits(596) 0.0 125/125(100%) 0/125(0%) Minus/Minus
Query     1215  WTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTXXXXXXXXXXXLDASCTPHPPKPFYTFP*R*SLPPWS*LW*HC  1589
                WTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLDASCTPHPPKPFYTFP*R*SLPPWS*LW*HC
Subject   6691  WTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLDASCTPHPPKPFYTFP*R*SLPPWS*LW*HC  7065

Range 12: 7168 to 7482 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
267.3 bits(577) 0.0 105/105(100%) 0/105(0%) Plus/Plus
Query     1692  EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL*AQSWTIRSAHILATRHLNQYPTLCFTRSPRLVAFEVYERMNFGPTFEG  2006
                EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL*AQSWTIRSAHILATRHLNQYPTLCFTRSPRLVAFEVYERMNFGPTFEG
Subject   7168  EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL*AQSWTIRSAHILATRHLNQYPTLCFTRSPRLVAFEVYERMNFGPTFEG  7482

Range 13: 7198 to 7482 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
225.1 bits(485) 0.0 95/95(100%) 0/95(0%) Minus/Minus
Query     1722  PFEGRSKIHTLIYLESNQPGRTCEAKRRILIEVTRR*YMCRPYRPTLSSERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA  2006
                PFEGRSKIHTLIYLESNQPGRTCEAKRRILIEVTRR*YMCRPYRPTLSSERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA
Subject   7198  PFEGRSKIHTLIYLESNQPGRTCEAKRRILIEVTRR*YMCRPYRPTLSSERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA  7482

Range 14: 5987 to 6229 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
171.5 bits(368) 0.0 78/81(96%) 0/81(0%) Plus/Plus
Query      511  EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*EDVQGVAYG*KYSRHYRRRC  753
                EVDILDMVRTRLR*EV*VAQG**SSDGS*T*L+PNDI*SG*NRDL*RCRRGVLEVSGYRH*ED+QGVAYG*KY RHYRRRC
Subject   5987  EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LYPNDI*SG*NRDL*RCRRGVLEVSGYRH*EDIQGVAYG*KYCRHYRRRC  6229

Range 15: 5479 to 5628 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
124.3 bits(265) 0.0 50/50(100%) 0/50(0%) Minus/Minus
Query        3  GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLMK  152
                GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLMK
Subject   5479  GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLMK  5628

Range 16: 6529 to 6651 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.4 bits(239) 0.0 41/41(100%) 0/41(0%) Minus/Minus
Query     1053  YLCPQNFPH*P*WWLCYWVT*RIRPLTSSSYRHLGEHYSTY  1175
                YLCPQNFPH*P*WWLCYWVT*RIRPLTSSSYRHLGEHYSTY
Subject   6529  YLCPQNFPH*P*WWLCYWVT*RIRPLTSSSYRHLGEHYSTY  6651

Range 17: 6418 to 6483 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.0 bits(118) 0.0 22/22(100%) 0/22(0%) Minus/Minus
Query      942  LSVHLSN*WHRGKPVYRRIRTD  1007
                LSVHLSN*WHRGKPVYRRIRTD
Subject   6418  LSVHLSN*WHRGKPVYRRIRTD  6483

Grapevine leafroll associated virus 3 isolate 621, complete genome

Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 17

Range 1: 5478 to 7481 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1592.0 bits(3468) 0.0 667/668(100%) 0/668(0%) Plus/Plus
Query        2  VSSGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGVTRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPYVFIAEKGIFTKGKDVDAVVALGDNLFVCDDILVFHDAINLIGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGLNSATTVNSRVVNFIVRGMYKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALSSKLDDKVGTYISDASPQSVSDALLHTFAPAGCFRGI*AYEFWTDLRR  2005
                VSSGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQG TRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPYVFIAEKGIFTKGKDVDAVVALGDNLFVCDDILVFHDAINLIGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGLNSATTVNSRVVNFIVRGMYKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALSSKLDDKVGTYISDASPQSVSDALLHTFAPAGCFRGI*AYEFWTDLRR
Subject   5478  VSSGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPYVFIAEKGIFTKGKDVDAVVALGDNLFVCDDILVFHDAINLIGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGLNSATTVNSRVVNFIVRGMYKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALSSKLDDKVGTYISDASPQSVSDALLHTFAPAGCFRGI*AYEFWTDLRR  7481

Range 2: 5478 to 7481 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1548.9 bits(3374) 0.0 659/668(99%) 0/668(0%) Minus/Minus
Query        2  PSKVGPKFIRSYTSKATSRGERVKQSVGY*LR*RVANICADLIVQL*AQSGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQXXXXXXXXXXXXXSNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFIHSPDDKVYHPGVNCGSTVETFQIRISLLHRHIYVLRTSHISRNGGCAIG*LNEFVH*HRRLTATWGSIIALIFEGLKRFAHHAASSDFQCTYQINGIVENQYIVAYEQIVAQSYHRVDIFALSKDTFFSYEYVR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDGYISSHKQRPVRPLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRFWCDCSGNTLALWLLVWNTW*FLIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTRPP**N  2005
                PSKVGPKFIRSYTSKATSRG+RVKQSVGY*LR*RVANICADLIVQL*AQSGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVSVYFSYVIS SNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFIHSPDDKVYHPGVNCGSTVETFQIRISLLHRHIYVLRTSHISRNGGCAIG*LNEFVH HRRLTATWGSIIALIFEGLKRFAHHAASSDFQCTYQINGIVENQYIVAYEQIVAQSYHRVDIF LSKDTFFSYEYVR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDG ISSHKQRPV PLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAP FWCDCSG+TLALWLLVWNTW* LIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTRPP**N
Subject   5478  PSKVGPKFIRSYTSKATSRGKRVKQSVGY*LR*RVANICADLIVQL*AQSGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVSVYFSYVISGSNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFIHSPDDKVYHPGVNCGSTVETFQIRISLLHRHIYVLRTSHISRNGGCAIG*LNEFVHQHRRLTATWGSIIALIFEGLKRFAHHAASSDFQCTYQINGIVENQYIVAYEQIVAQSYHRVDIFTLSKDTFFSYEYVR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDGNISSHKQRPVCPLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAP*FWCDCSGSTLALWLLVWNTW*LLIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTRPP**N  7481

Range 3: 5477 to 7021 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1170.0 bits(2547) 0.0 514/515(100%) 0/515(0%) Minus/Minus
Query        1  FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLYIPLTIKFTTLELTVVALLRPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTNIVVLPPPGGAL*HLYSKDLNDSPTMPHRATFSAPIKLMASWKTSISSHTNRLSPKATTASTSLPLVKIPFSAMNTYGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDXXXXXXXXXSDRALPPDFGVIVLVTPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDET  1545
                FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLYIPLTIKFTTLELTVVALLRPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTNIVVLPPPGGAL*HLYSKDLNDSPTMPHRATFSAPIKLMASWKTSISSHTNRLSPKATTASTSLPLVKIPFSAMNTYGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLV PWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDET
Subject   5477  FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLYIPLTIKFTTLELTVVALLRPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTNIVVLPPPGGAL*HLYSKDLNDSPTMPHRATFSAPIKLMASWKTSISSHTNRLSPKATTASTSLPLVKIPFSAMNTYGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDET  7021

Range 4: 5479 to 6639 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
881.7 bits(1918) 0.0 381/387(98%) 0/387(0%) Plus/Plus
Query        3  FHQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRNHQVFQTSNHRAKVLPEQSHQNRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRGRTGRCLWLEI*PSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRTYS*LKKVSLLRAKMSTRW*LWATICSYATIYWFSTMPLI**VH*KSLDAAWWANRLSPSNISAIMLPQVAVRRRC*WTNSLSHPIAQPPLRLMWEVL  1163
                FHQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMR+HQVFQTSNHRAKVLPEQSHQN+GARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRG TGRCLWLEI PSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRTYS*LKKVSLLR KMSTRW*LWATICSYATIYWFSTMPLI**VH*KSLDAAWWANRLSPSNISAIMLPQVAVRRRC WTNSLSHPIAQPPLRLMWEVL
Subject   5479  FHQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRSHQVFQTSNHRAKVLPEQSHQNQGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRGHTGRCLWLEILPSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRTYS*LKKVSLLRVKMSTRW*LWATICSYATIYWFSTMPLI**VH*KSLDAAWWANRLSPSNISAIMLPQVAVRRRCWWTNSLSHPIAQPPLRLMWEVL  6639

Range 5: 5674 to 6369 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
514.3 bits(1116) 0.0 228/232(98%) 0/232(0%) Minus/Minus
Query      198  YLFQL*IRTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**RLYF*P*ATPCTSSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLVISHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT  893
                YLFQL*IRTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**R YF*P*ATPC SSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCP ILV*LFW*HLGSVVAGLEHLV SHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT
Subject   5674  YLFQL*IRTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**RQYF*P*ATPCMSSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPLILV*LFW*HLGSVVAGLEHLVTSHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT  6369

Range 6: 6836 to 7480 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
456.1 bits(989) 0.0 213/215(99%) 0/215(0%) Plus/Plus
Query     1360  FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWNY**RS*NKR*RVLVHDPXXXXXXXXXXXXKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRSELKVGR*GRHIY*RRVTSISIRRFASHVRPGWLLSRYMSV*ILDRPSK  2004
                FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWN+**RS*NKR*RVLVHDPVGEVGYEEVVEGKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRSELKVGR*GRHIY*RRVTSISIRRFASHV PGWLLSRYMSV*ILDRPSK
Subject   6836  FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWNH**RS*NKR*RVLVHDPVGEVGYEEVVEGKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRSELKVGR*GRHIY*RRVTSISIRRFASHVCPGWLLSRYMSV*ILDRPSK  7480

Range 7: 5477 to 5935 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
364.0 bits(788) 0.0 152/153(99%) 0/153(0%) Plus/Plus
Query        1  CFIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EITRCSKPATTEPRCYQNNHT  459
                CFIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*E+TRCSKPATTEPRCYQNNHT
Subject   5477  CFIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EVTRCSKPATTEPRCYQNNHT  5935

Range 8: 6281 to 6736 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
326.4 bits(706) 0.0 150/152(99%) 0/152(0%) Plus/Plus
Query      805  QVGHRSHFSFNTRRLACERPTVRIHS*KRYLY*GQRCRRGGSFGRQSVRMRRYTGFPRCH*FDRCTESRSMRHGGRIV*VLRI*VL*CSPRWR*DDDVSGRIR*VTQ*HSHHYG*CGKF*GHKYXXXXXXXXXXXXQQCYHS*LQGGKLYRQ  1260
                QVGHRSHFSFNTRRLACERPTVRIHS*KRYLY*G RCRRGGSFGRQSVRMRRYTGFPRCH*FDRCTESRSMRHGGRIV*VLRI*VL*CSPRWR*DDDV GRIR*VTQ*HSHHYG*CGKF*GHKYGGEEERSEFGRSQQCYHS*LQGGKLYRQ
Subject   6281  QVGHRSHFSFNTRRLACERPTVRIHS*KRYLY*G*RCRRGGSFGRQSVRMRRYTGFPRCH*FDRCTESRSMRHGGRIV*VLRI*VL*CSPRWR*DDDVGGRIR*VTQ*HSHHYG*CGKF*GHKYGGEEERSEFGRSQQCYHS*LQGGKLYRQ  6736

Range 9: 7073 to 7480 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
320.0 bits(692) 0.0 136/136(100%) 0/136(0%) Minus/Minus
Query     1597  LRRSVQNSYAHIPRKQPAGANV*SKASDTD*GDASLIYVPTLSSNFELRAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI  2004
                LRRSVQNSYAHIPRKQPAGANV*SKASDTD*GDASLIYVPTLSSNFELRAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI
Subject   7073  LRRSVQNSYAHIPRKQPAGANV*SKASDTD*GDASLIYVPTLSSNFELRAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI  7480

Range 10: 6679 to 7074 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
315.4 bits(682) 0.0 132/132(100%) 0/132(0%) Plus/Plus
Query     1203  WKVSTVLPQLTPGW*TLSSGECIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQ  1598
                WKVSTVLPQLTPGW*TLSSGECIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQ
Subject   6679  WKVSTVLPQLTPGW*TLSSGECIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQ  7074

Range 11: 6691 to 7065 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
276.0 bits(596) 0.0 125/125(100%) 0/125(0%) Minus/Minus
Query     1215  WTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTXXXXXXXXXXXLDASCTPHPPKPFYTFP*R*SLPPWS*LW*HC  1589
                WTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLDASCTPHPPKPFYTFP*R*SLPPWS*LW*HC
Subject   6691  WTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLDASCTPHPPKPFYTFP*R*SLPPWS*LW*HC  7065

Range 12: 7168 to 7482 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
264.5 bits(571) 0.0 104/105(99%) 0/105(0%) Plus/Plus
Query     1692  EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL*AQSWTIRSAHILATRHLNQYPTLCFTRSPRLVAFEVYERMNFGPTFEG  2006
                EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL*AQSWTIRSAHILATRHLNQYPTLCFTR PRLVAFEVYERMNFGPTFEG
Subject   7168  EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL*AQSWTIRSAHILATRHLNQYPTLCFTRLPRLVAFEVYERMNFGPTFEG  7482

Range 13: 7198 to 7482 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
223.3 bits(481) 0.0 94/95(99%) 0/95(0%) Minus/Minus
Query     1722  PFEGRSKIHTLIYLESNQPGRTCEAKRRILIEVTRR*YMCRPYRPTLSSERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA  2006
                PFEGRSKIHTLIYLESNQPG+TCEAKRRILIEVTRR*YMCRPYRPTLSSERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA
Subject   7198  PFEGRSKIHTLIYLESNQPGQTCEAKRRILIEVTRR*YMCRPYRPTLSSERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA  7482

Range 14: 5987 to 6229 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
174.3 bits(374) 0.0 79/81(98%) 0/81(0%) Plus/Plus
Query      511  EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*EDVQGVAYG*KYSRHYRRRC  753
                EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*ED+QGVAYG*KY RHYRRRC
Subject   5987  EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*EDIQGVAYG*KYCRHYRRRC  6229

Range 15: 5479 to 5628 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
124.3 bits(265) 0.0 50/50(100%) 0/50(0%) Minus/Minus
Query        3  GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLMK  152
                GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLMK
Subject   5479  GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLMK  5628

Range 16: 6529 to 6651 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
109.2 bits(232) 0.0 40/41(98%) 0/41(0%) Minus/Minus
Query     1053  YLCPQNFPH*P*WWLCYWVT*RIRPLTSSSYRHLGEHYSTY  1175
                YLCPQNFPH*P*WWLCYWVT*RIRP TSSSYRHLGEHYSTY
Subject   6529  YLCPQNFPH*P*WWLCYWVT*RIRPPTSSSYRHLGEHYSTY  6651

Range 17: 6418 to 6483 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.0 bits(118) 0.0 22/22(100%) 0/22(0%) Minus/Minus
Query      942  LSVHLSN*WHRGKPVYRRIRTD  1007
                LSVHLSN*WHRGKPVYRRIRTD
Subject   6418  LSVHLSN*WHRGKPVYRRIRTD  6483

Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome

Sequence ID: KX756669.1 Length: 18313 Number of Matches: 17

Range 1: 5293 to 7296 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1592.0 bits(3468) 0.0 667/668(100%) 0/668(0%) Plus/Plus
Query        2  VSSGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGVTRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPYVFIAEKGIFTKGKDVDAVVALGDNLFVCDDILVFHDAINLIGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGLNSATTVNSRVVNFIVRGMYKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALSSKLDDKVGTYISDASPQSVSDALLHTFAPAGCFRGI*AYEFWTDLRR  2005
                VSSGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQG TRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPYVFIAEKGIFTKGKDVDAVVALGDNLFVCDDILVFHDAINLIGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGLNSATTVNSRVVNFIVRGMYKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALSSKLDDKVGTYISDASPQSVSDALLHTFAPAGCFRGI*AYEFWTDLRR
Subject   5293  VSSGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPYVFIAEKGIFTKGKDVDAVVALGDNLFVCDDILVFHDAINLIGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGLNSATTVNSRVVNFIVRGMYKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALSSKLDDKVGTYISDASPQSVSDALLHTFAPAGCFRGI*AYEFWTDLRR  7296

Range 2: 5293 to 7296 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1553.5 bits(3384) 0.0 660/668(99%) 0/668(0%) Minus/Minus
Query        2  PSKVGPKFIRSYTSKATSRGERVKQSVGY*LR*RVANICADLIVQL*AQSGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQXXXXXXXXXXXXXSNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFIHSPDDKVYHPGVNCGSTVETFQIRISLLHRHIYVLRTSHISRNGGCAIG*LNEFVH*HRRLTATWGSIIALIFEGLKRFAHHAASSDFQCTYQINGIVENQYIVAYEQIVAQSYHRVDIFALSKDTFFSYEYVR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDGYISSHKQRPVRPLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRFWCDCSGNTLALWLLVWNTW*FLIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTRPP**N  2005
                PSKVGPKFIRSYTSKATSRGERVKQSVGY*LR*RVANICADLIVQL*AQSGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVSVYFSYVIS SNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVA+I*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRA CEDA*L**ALMHHVHLIHQNPFIHSPDDKVYHPGVNCGSTVETFQIRISLLHRHIYVLRTSHISRNGGCAIG*LNEFVH*HRRLTATWGSIIALIFEGLKRFAHHAASSDFQCTYQINGIVENQYIVAYEQIVAQSYHRVDIFALSKDTFFSYEYVR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDG ISSHKQRPV PLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRFWCDCSG+TLALWLLVWNTW* LIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDR+I*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTRPP**N
Subject   5293  PSKVGPKFIRSYTSKATSRGERVKQSVGY*LR*RVANICADLIVQL*AQSGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVSVYFSYVISGSNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVADI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRASCEDA*L**ALMHHVHLIHQNPFIHSPDDKVYHPGVNCGSTVETFQIRISLLHRHIYVLRTSHISRNGGCAIG*LNEFVH*HRRLTATWGSIIALIFEGLKRFAHHAASSDFQCTYQINGIVENQYIVAYEQIVAQSYHRVDIFALSKDTFFSYEYVR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDGNISSHKQRPVCPLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRFWCDCSGSTLALWLLVWNTW*LLIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRII*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTRPP**N  7296

Range 3: 5292 to 6836 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1170.0 bits(2547) 0.0 514/515(100%) 0/515(0%) Minus/Minus
Query        1  FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLYIPLTIKFTTLELTVVALLRPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTNIVVLPPPGGAL*HLYSKDLNDSPTMPHRATFSAPIKLMASWKTSISSHTNRLSPKATTASTSLPLVKIPFSAMNTYGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDXXXXXXXXXSDRALPPDFGVIVLVTPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDET  1545
                FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLYIPLTIKFTTLELTVVALLRPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTNIVVLPPPGGAL*HLYSKDLNDSPTMPHRATFSAPIKLMASWKTSISSHTNRLSPKATTASTSLPLVKIPFSAMNTYGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLV PWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDET
Subject   5292  FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLYIPLTIKFTTLELTVVALLRPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTNIVVLPPPGGAL*HLYSKDLNDSPTMPHRATFSAPIKLMASWKTSISSHTNRLSPKATTASTSLPLVKIPFSAMNTYGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDET  6836

Range 4: 5294 to 6454 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
885.0 bits(1925) 0.0 383/387(99%) 0/387(0%) Plus/Plus
Query        3  FHQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRNHQVFQTSNHRAKVLPEQSHQNRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRGRTGRCLWLEI*PSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRTYS*LKKVSLLRAKMSTRW*LWATICSYATIYWFSTMPLI**VH*KSLDAAWWANRLSPSNISAIMLPQVAVRRRC*WTNSLSHPIAQPPLRLMWEVL  1163
                FHQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQI LS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMR+HQVFQTSNHRAKVLPEQSHQNRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRG TGRCLWLEI PSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRTYS*LKKVSLLRAKMSTRW*LWATICSYATIYWFSTMPLI**VH*KSLDAAWWANRLSPSNISAIMLPQVAVRRRC*WTNSLSHPIAQPPLRLMWEVL
Subject   5294  FHQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQIILS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRSHQVFQTSNHRAKVLPEQSHQNRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRGHTGRCLWLEILPSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRTYS*LKKVSLLRAKMSTRW*LWATICSYATIYWFSTMPLI**VH*KSLDAAWWANRLSPSNISAIMLPQVAVRRRC*WTNSLSHPIAQPPLRLMWEVL  6454

Range 5: 5489 to 6184 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
518.8 bits(1126) 0.0 229/232(99%) 0/232(0%) Minus/Minus
Query      198  YLFQL*IRTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**RLYF*P*ATPCTSSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLVISHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT  893
                YLFQL*IRTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**R YF*P*ATPC SSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLV SHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT
Subject   5489  YLFQL*IRTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**RQYF*P*ATPCMSSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLVTSHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT  6184

Range 6: 6651 to 7295 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
459.7 bits(997) 0.0 214/215(100%) 0/215(0%) Plus/Plus
Query     1360  FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWNY**RS*NKR*RVLVHDPXXXXXXXXXXXXKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRSELKVGR*GRHIY*RRVTSISIRRFASHVRPGWLLSRYMSV*ILDRPSK  2004
                FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWN+**RS*NKR*RVLVHDPVGEVGYEEVVEGKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRSELKVGR*GRHIY*RRVTSISIRRFASHVRPGWLLSRYMSV*ILDRPSK
Subject   6651  FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWNH**RS*NKR*RVLVHDPVGEVGYEEVVEGKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRSELKVGR*GRHIY*RRVTSISIRRFASHVRPGWLLSRYMSV*ILDRPSK  7295

Range 7: 5292 to 5750 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
360.3 bits(780) 0.0 151/153(99%) 0/153(0%) Plus/Plus
Query        1  CFIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EITRCSKPATTEPRCYQNNHT  459
                CFIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR* YLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*E+TRCSKPATTEPRCYQNNHT
Subject   5292  CFIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*SYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EVTRCSKPATTEPRCYQNNHT  5750

Range 8: 6096 to 6551 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
332.4 bits(719) 0.0 152/152(100%) 0/152(0%) Plus/Plus
Query      805  QVGHRSHFSFNTRRLACERPTVRIHS*KRYLY*GQRCRRGGSFGRQSVRMRRYTGFPRCH*FDRCTESRSMRHGGRIV*VLRI*VL*CSPRWR*DDDVSGRIR*VTQ*HSHHYG*CGKF*GHKYXXXXXXXXXXXXQQCYHS*LQGGKLYRQ  1260
                QVGHRSHFSFNTRRLACERPTVRIHS*KRYLY*GQRCRRGGSFGRQSVRMRRYTGFPRCH*FDRCTESRSMRHGGRIV*VLRI*VL*CSPRWR*DDDVSGRIR*VTQ*HSHHYG*CGKF*GHKYGGEEERSEFGRSQQCYHS*LQGGKLYRQ
Subject   6096  QVGHRSHFSFNTRRLACERPTVRIHS*KRYLY*GQRCRRGGSFGRQSVRMRRYTGFPRCH*FDRCTESRSMRHGGRIV*VLRI*VL*CSPRWR*DDDVSGRIR*VTQ*HSHHYG*CGKF*GHKYGGEEERSEFGRSQQCYHS*LQGGKLYRQ  6551

Range 9: 6888 to 7295 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
320.0 bits(692) 0.0 136/136(100%) 0/136(0%) Minus/Minus
Query     1597  LRRSVQNSYAHIPRKQPAGANV*SKASDTD*GDASLIYVPTLSSNFELRAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI  2004
                LRRSVQNSYAHIPRKQPAGANV*SKASDTD*GDASLIYVPTLSSNFELRAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI
Subject   6888  LRRSVQNSYAHIPRKQPAGANV*SKASDTD*GDASLIYVPTLSSNFELRAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI  7295

Range 10: 6494 to 6889 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
307.2 bits(664) 0.0 130/132(98%) 0/132(0%) Plus/Plus
Query     1203  WKVSTVLPQLTPGW*TLSSGECIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQ  1598
                WKVSTVLPQLTPGW*TLSSGECIKGFWWMRCT*CIKAYYN*ASSQ ARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*M ATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQ
Subject   6494  WKVSTVLPQLTPGW*TLSSGECIKGFWWMRCT*CIKAYYN*ASSQLARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MSATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQ  6889

Range 11: 6506 to 6880 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
274.6 bits(593) 0.0 123/125(98%) 0/125(0%) Minus/Minus
Query     1215  WTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTXXXXXXXXXXXLDASCTPHPPKPFYTFP*R*SLPPWS*LW*HC  1589
                WTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSS+HLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTR+LRRRLVVVSLDASCTPHPPKPFYTFP*R*SLPPWS*LW*HC
Subject   6506  WTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSRHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRQLRRRLVVVSLDASCTPHPPKPFYTFP*R*SLPPWS*LW*HC  6880

Range 12: 6983 to 7297 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
267.3 bits(577) 0.0 105/105(100%) 0/105(0%) Plus/Plus
Query     1692  EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL*AQSWTIRSAHILATRHLNQYPTLCFTRSPRLVAFEVYERMNFGPTFEG  2006
                EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL*AQSWTIRSAHILATRHLNQYPTLCFTRSPRLVAFEVYERMNFGPTFEG
Subject   6983  EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL*AQSWTIRSAHILATRHLNQYPTLCFTRSPRLVAFEVYERMNFGPTFEG  7297

Range 13: 7013 to 7297 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
225.1 bits(485) 0.0 95/95(100%) 0/95(0%) Minus/Minus
Query     1722  PFEGRSKIHTLIYLESNQPGRTCEAKRRILIEVTRR*YMCRPYRPTLSSERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA  2006
                PFEGRSKIHTLIYLESNQPGRTCEAKRRILIEVTRR*YMCRPYRPTLSSERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA
Subject   7013  PFEGRSKIHTLIYLESNQPGRTCEAKRRILIEVTRR*YMCRPYRPTLSSERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA  7297

Range 14: 5802 to 6044 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
174.3 bits(374) 0.0 79/81(98%) 0/81(0%) Plus/Plus
Query      511  EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*EDVQGVAYG*KYSRHYRRRC  753
                EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*ED+QGVAYG*KY RHYRRRC
Subject   5802  EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*EDIQGVAYG*KYCRHYRRRC  6044

Range 15: 5294 to 5440 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
121.6 bits(259) 0.0 49/49(100%) 0/49(0%) Minus/Minus
Query        3  YLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLMK  149
                YLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLMK
Subject   5294  YLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLMK  5440

Range 16: 6344 to 6466 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.4 bits(239) 0.0 41/41(100%) 0/41(0%) Minus/Minus
Query     1053  YLCPQNFPH*P*WWLCYWVT*RIRPLTSSSYRHLGEHYSTY  1175
                YLCPQNFPH*P*WWLCYWVT*RIRPLTSSSYRHLGEHYSTY
Subject   6344  YLCPQNFPH*P*WWLCYWVT*RIRPLTSSSYRHLGEHYSTY  6466

Range 17: 6233 to 6298 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.0 bits(118) 0.0 22/22(100%) 0/22(0%) Minus/Minus
Query      942  LSVHLSN*WHRGKPVYRRIRTD  1007
                LSVHLSN*WHRGKPVYRRIRTD
Subject   6233  LSVHLSN*WHRGKPVYRRIRTD  6298

Grapevine leafroll associated virus 3 isolate WA MR, complete genome

Sequence ID: GU983863.1 Length: 18498 Number of Matches: 17

Range 1: 5478 to 7481 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1590.6 bits(3465) 0.0 666/668(100%) 0/668(0%) Plus/Plus
Query        2  VSSGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGVTRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPYVFIAEKGIFTKGKDVDAVVALGDNLFVCDDILVFHDAINLIGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGLNSATTVNSRVVNFIVRGMYKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALSSKLDDKVGTYISDASPQSVSDALLHTFAPAGCFRGI*AYEFWTDLRR  2005
                VSSGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQG TRTITPKSGGKALSEGSG+EVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPYVFIAEKGIFTKGKDVDAVVALGDNLFVCDDILVFHDAINLIGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGLNSATTVNSRVVNFIVRGMYKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALSSKLDDKVGTYISDASPQSVSDALLHTFAPAGCFRGI*AYEFWTDLRR
Subject   5478  VSSGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGKEVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPYVFIAEKGIFTKGKDVDAVVALGDNLFVCDDILVFHDAINLIGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGLNSATTVNSRVVNFIVRGMYKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALSSKLDDKVGTYISDASPQSVSDALLHTFAPAGCFRGI*AYEFWTDLRR  7481

Range 2: 5478 to 7481 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1550.3 bits(3377) 0.0 661/668(99%) 0/668(0%) Minus/Minus
Query        2  PSKVGPKFIRSYTSKATSRGERVKQSVGY*LR*RVANICADLIVQL*AQSGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQXXXXXXXXXXXXXSNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFIHSPDDKVYHPGVNCGSTVETFQIRISLLHRHIYVLRTSHISRNGGCAIG*LNEFVH*HRRLTATWGSIIALIFEGLKRFAHHAASSDFQCTYQINGIVENQYIVAYEQIVAQSYHRVDIFALSKDTFFSYEYVR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDGYISSHKQRPVRPLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRFWCDCSGNTLALWLLVWNTW*FLIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTRPP**N  2005
                PSKVGPKFIRSYTSKATSRGERVKQSVGY*LR*RVANICADLIVQL*AQSGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVSVYFSYVIS SNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFIHSPDDKVYHPGVNCGSTVETFQIRISLLHRHIYVLRTSHISRNGGCAIG*LNEFVH*HRRLTATWGSIIALIFEGLKRFAHHAASSDFQCTYQINGIVENQYIVAYE IVAQSYHRVDIFALSKDTFFSYEYVR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDG ISSHKQRPV PLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDF TTSLR*SLAPRFWCDCSG+TLALWLLVWNTW* LIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTRPP**N
Subject   5478  PSKVGPKFIRSYTSKATSRGERVKQSVGY*LR*RVANICADLIVQL*AQSGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVSVYFSYVISGSNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFIHSPDDKVYHPGVNCGSTVETFQIRISLLHRHIYVLRTSHISRNGGCAIG*LNEFVH*HRRLTATWGSIIALIFEGLKRFAHHAASSDFQCTYQINGIVENQYIVAYE*IVAQSYHRVDIFALSKDTFFSYEYVR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDGNISSHKQRPVCPLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFLTTSLR*SLAPRFWCDCSGSTLALWLLVWNTW*LLIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTRPP**N  7481

Range 3: 5477 to 7021 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1170.0 bits(2547) 0.0 514/515(100%) 0/515(0%) Minus/Minus
Query        1  FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLYIPLTIKFTTLELTVVALLRPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTNIVVLPPPGGAL*HLYSKDLNDSPTMPHRATFSAPIKLMASWKTSISSHTNRLSPKATTASTSLPLVKIPFSAMNTYGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDXXXXXXXXXSDRALPPDFGVIVLVTPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDET  1545
                FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLYIPLTIKFTTLELTVVALLRPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTNIVVLPPPGGAL*HLYSKDLNDSPTMPHRATFSAPIKLMASWKTSISSHTNRLSPKATTASTSLPLVKIPFSAMNTYGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLV PWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDET
Subject   5477  FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLYIPLTIKFTTLELTVVALLRPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTNIVVLPPPGGAL*HLYSKDLNDSPTMPHRATFSAPIKLMASWKTSISSHTNRLSPKATTASTSLPLVKIPFSAMNTYGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDET  7021

Range 4: 5479 to 6639 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
879.0 bits(1912) 0.0 382/387(99%) 0/387(0%) Plus/Plus
Query        3  FHQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRNHQVFQTSNHRAKVLPEQSHQNRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRGRTGRCLWLEI*PSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRTYS*LKKVSLLRAKMSTRW*LWATICSYATIYWFSTMPLI**VH*KSLDAAWWANRLSPSNISAIMLPQVAVRRRC*WTNSLSHPIAQPPLRLMWEVL  1163
                FHQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMR+HQVFQTSNHRAKVLPEQSHQNRGARLYLREVV KSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRG TGRCLWLEI PSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRTYS*LKKVSLLRAKMSTRW*LWATI SYATIYWFSTMPLI**VH*KSLDAAWWANRLSPSNISAIMLPQVAVRRRC*WTNSLSHPIAQPPLRLMWEVL
Subject   5479  FHQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRSHQVFQTSNHRAKVLPEQSHQNRGARLYLREVVRKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRGHTGRCLWLEILPSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRTYS*LKKVSLLRAKMSTRW*LWATIYSYATIYWFSTMPLI**VH*KSLDAAWWANRLSPSNISAIMLPQVAVRRRC*WTNSLSHPIAQPPLRLMWEVL  6639

Range 5: 5674 to 6369 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
518.8 bits(1126) 0.0 229/232(99%) 0/232(0%) Minus/Minus
Query      198  YLFQL*IRTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**RLYF*P*ATPCTSSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLVISHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT  893
                YLFQL*IRTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**R YF*P*ATPC SSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLV SHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT
Subject   5674  YLFQL*IRTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**RQYF*P*ATPCMSSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLVTSHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT  6369

Range 6: 6836 to 7480 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
459.7 bits(997) 0.0 214/215(100%) 0/215(0%) Plus/Plus
Query     1360  FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWNY**RS*NKR*RVLVHDPXXXXXXXXXXXXKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRSELKVGR*GRHIY*RRVTSISIRRFASHVRPGWLLSRYMSV*ILDRPSK  2004
                FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWN+**RS*NKR*RVLVHDPVGEVGYEEVVEGKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRSELKVGR*GRHIY*RRVTSISIRRFASHVRPGWLLSRYMSV*ILDRPSK
Subject   6836  FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWNH**RS*NKR*RVLVHDPVGEVGYEEVVEGKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRSELKVGR*GRHIY*RRVTSISIRRFASHVRPGWLLSRYMSV*ILDRPSK  7480

Range 7: 5477 to 5935 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
364.0 bits(788) 0.0 152/153(99%) 0/153(0%) Plus/Plus
Query        1  CFIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EITRCSKPATTEPRCYQNNHT  459
                CFIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*E+TRCSKPATTEPRCYQNNHT
Subject   5477  CFIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EVTRCSKPATTEPRCYQNNHT  5935

Range 8: 6281 to 6736 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
331.9 bits(718) 0.0 151/152(99%) 0/152(0%) Plus/Plus
Query      805  QVGHRSHFSFNTRRLACERPTVRIHS*KRYLY*GQRCRRGGSFGRQSVRMRRYTGFPRCH*FDRCTESRSMRHGGRIV*VLRI*VL*CSPRWR*DDDVSGRIR*VTQ*HSHHYG*CGKF*GHKYXXXXXXXXXXXXQQCYHS*LQGGKLYRQ  1260
                QVGHRSHFSFNTRRLACERPTVRIHS*KRYLY*GQRCRRGGSFGRQS+RMRRYTGFPRCH*FDRCTESRSMRHGGRIV*VLRI*VL*CSPRWR*DDDVSGRIR*VTQ*HSHHYG*CGKF*GHKYGGEEERSEFGRSQQCYHS*LQGGKLYRQ
Subject   6281  QVGHRSHFSFNTRRLACERPTVRIHS*KRYLY*GQRCRRGGSFGRQSIRMRRYTGFPRCH*FDRCTESRSMRHGGRIV*VLRI*VL*CSPRWR*DDDVSGRIR*VTQ*HSHHYG*CGKF*GHKYGGEEERSEFGRSQQCYHS*LQGGKLYRQ  6736

Range 9: 7073 to 7480 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
320.0 bits(692) 0.0 136/136(100%) 0/136(0%) Minus/Minus
Query     1597  LRRSVQNSYAHIPRKQPAGANV*SKASDTD*GDASLIYVPTLSSNFELRAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI  2004
                LRRSVQNSYAHIPRKQPAGANV*SKASDTD*GDASLIYVPTLSSNFELRAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI
Subject   7073  LRRSVQNSYAHIPRKQPAGANV*SKASDTD*GDASLIYVPTLSSNFELRAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI  7480

Range 10: 6679 to 7074 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
315.4 bits(682) 0.0 132/132(100%) 0/132(0%) Plus/Plus
Query     1203  WKVSTVLPQLTPGW*TLSSGECIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQ  1598
                WKVSTVLPQLTPGW*TLSSGECIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQ
Subject   6679  WKVSTVLPQLTPGW*TLSSGECIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQ  7074

Range 11: 6691 to 7065 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
276.0 bits(596) 0.0 125/125(100%) 0/125(0%) Minus/Minus
Query     1215  WTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTXXXXXXXXXXXLDASCTPHPPKPFYTFP*R*SLPPWS*LW*HC  1589
                WTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLDASCTPHPPKPFYTFP*R*SLPPWS*LW*HC
Subject   6691  WTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLDASCTPHPPKPFYTFP*R*SLPPWS*LW*HC  7065

Range 12: 7168 to 7482 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
267.3 bits(577) 0.0 105/105(100%) 0/105(0%) Plus/Plus
Query     1692  EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL*AQSWTIRSAHILATRHLNQYPTLCFTRSPRLVAFEVYERMNFGPTFEG  2006
                EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL*AQSWTIRSAHILATRHLNQYPTLCFTRSPRLVAFEVYERMNFGPTFEG
Subject   7168  EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL*AQSWTIRSAHILATRHLNQYPTLCFTRSPRLVAFEVYERMNFGPTFEG  7482

Range 13: 7198 to 7482 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
225.1 bits(485) 0.0 95/95(100%) 0/95(0%) Minus/Minus
Query     1722  PFEGRSKIHTLIYLESNQPGRTCEAKRRILIEVTRR*YMCRPYRPTLSSERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA  2006
                PFEGRSKIHTLIYLESNQPGRTCEAKRRILIEVTRR*YMCRPYRPTLSSERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA
Subject   7198  PFEGRSKIHTLIYLESNQPGRTCEAKRRILIEVTRR*YMCRPYRPTLSSERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA  7482

Range 14: 5987 to 6229 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
174.3 bits(374) 0.0 79/81(98%) 0/81(0%) Plus/Plus
Query      511  EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*EDVQGVAYG*KYSRHYRRRC  753
                EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*ED+QGVAYG*KY RHYRRRC
Subject   5987  EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*EDIQGVAYG*KYCRHYRRRC  6229

Range 15: 5479 to 5628 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
124.3 bits(265) 0.0 50/50(100%) 0/50(0%) Minus/Minus
Query        3  GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLMK  152
                GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLMK
Subject   5479  GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLMK  5628

Range 16: 6529 to 6651 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.4 bits(239) 0.0 41/41(100%) 0/41(0%) Minus/Minus
Query     1053  YLCPQNFPH*P*WWLCYWVT*RIRPLTSSSYRHLGEHYSTY  1175
                YLCPQNFPH*P*WWLCYWVT*RIRPLTSSSYRHLGEHYSTY
Subject   6529  YLCPQNFPH*P*WWLCYWVT*RIRPLTSSSYRHLGEHYSTY  6651

Range 17: 6418 to 6483 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.2 bits(112) 0.0 21/22(95%) 0/22(0%) Minus/Minus
Query      942  LSVHLSN*WHRGKPVYRRIRTD  1007
                LSVHLSN*WHRGKPVYRRIR D
Subject   6418  LSVHLSN*WHRGKPVYRRIRID  6483

Grapevine leafroll associated virus 3 isolate Cl 766, complete genome

Sequence ID: EU344893.1 Length: 17919 Number of Matches: 17

Range 1: 4899 to 6902 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1583.3 bits(3449) 0.0 663/668(99%) 0/668(0%) Plus/Plus
Query        2  VSSGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGVTRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPYVFIAEKGIFTKGKDVDAVVALGDNLFVCDDILVFHDAINLIGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGLNSATTVNSRVVNFIVRGMYKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALSSKLDDKVGTYISDASPQSVSDALLHTFAPAGCFRGI*AYEFWTDLRR  2005
                VSSGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQG TRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPYVFIAEKGIFTKGKDVDAVVALGDNLFVCDDILVFHDAINLIGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGLNSATTVNSRVVNFIVRGMYKRVLVDEVYMMHQGLLQLGVFA GASEGLFFGDINQIPFINREKVFRMDCA FVPKKESVVYTSKSYRCPLDVCYLLSS+TVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTK ADDSLFTKQPHILVGLSRHTRSLVYAALSSKLDDKVGTYISDASPQSVSDALLHTFAPAGCFRGI*AYEFWTDLRR
Subject   4899  VSSGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPYVFIAEKGIFTKGKDVDAVVALGDNLFVCDDILVFHDAINLIGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGLNSATTVNSRVVNFIVRGMYKRVLVDEVYMMHQGLLQLGVFAIGASEGLFFGDINQIPFINREKVFRMDCAAFVPKKESVVYTSKSYRCPLDVCYLLSSVTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKNADDSLFTKQPHILVGLSRHTRSLVYAALSSKLDDKVGTYISDASPQSVSDALLHTFAPAGCFRGI*AYEFWTDLRR  6902

Range 2: 4899 to 6902 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1545.2 bits(3366) 0.0 658/668(99%) 0/668(0%) Minus/Minus
Query        2  PSKVGPKFIRSYTSKATSRGERVKQSVGY*LR*RVANICADLIVQL*AQSGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQXXXXXXXXXXXXXSNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFIHSPDDKVYHPGVNCGSTVETFQIRISLLHRHIYVLRTSHISRNGGCAIG*LNEFVH*HRRLTATWGSIIALIFEGLKRFAHHAASSDFQCTYQINGIVENQYIVAYEQIVAQSYHRVDIFALSKDTFFSYEYVR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDGYISSHKQRPVRPLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRFWCDCSGNTLALWLLVWNTW*FLIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTRPP**N  2005
                PSKVGPKFIRSYTSKATSRGERVKQSVGY*LR*RVANICADLIVQL*AQSGINQ*ACVSRQTNKYMRLFSE*GVIG+LRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVSVYFSYVIS SNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNK+STIHPKHLLPVYEWYLIYVSKKEAFRRA CEDA*L**ALMHHVHLIHQNPFIHSPDDKVYHPGVNCGSTVETFQIRISLLHRHIYVLRTSHISRNGGCAIG*LNEFVH*HRRLTATWGSIIALIFEGLKRFAHHAASSDFQCTYQINGIVENQYIVAYEQIVAQSYHRVDIFAL KDTFFSYEYVR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDG ISSHKQRPV PLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRFWCDCSG+TLALWLLVWNTW* LIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREV LPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTRPP**N
Subject   4899  PSKVGPKFIRSYTSKATSRGERVKQSVGY*LR*RVANICADLIVQL*AQSGINQ*ACVSRQTNKYMRLFSE*GVIGILRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVSVYFSYVISGSNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKSSTIHPKHLLPVYEWYLIYVSKKEAFRRADCEDA*L**ALMHHVHLIHQNPFIHSPDDKVYHPGVNCGSTVETFQIRISLLHRHIYVLRTSHISRNGGCAIG*LNEFVH*HRRLTATWGSIIALIFEGLKRFAHHAASSDFQCTYQINGIVENQYIVAYEQIVAQSYHRVDIFALGKDTFFSYEYVR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDGNISSHKQRPVCPLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRFWCDCSGSTLALWLLVWNTW*LLIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVRLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTRPP**N  6902

Range 3: 4898 to 6442 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1163.5 bits(2533) 0.0 510/515(99%) 0/515(0%) Minus/Minus
Query        1  FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLYIPLTIKFTTLELTVVALLRPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTNIVVLPPPGGAL*HLYSKDLNDSPTMPHRATFSAPIKLMASWKTSISSHTNRLSPKATTASTSLPLVKIPFSAMNTYGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDXXXXXXXXXSDRALPPDFGVIVLVTPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDET  1545
                FSG*HFSVPLTV EDNK*QTSNGHLYDLEVYTTLSFFGTK AQSILNTFSLFMNGI*FMSPKKRPSDAP+AKTPSCSKP*CIMYTSSTKTLLYIPLTIKFTTLELTVVALLRPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTNIVVLPPPGGAL*HLYSKDLNDSPTMPHRATFSAPIKLMASWKTSISSHTNRLSPKATTASTSLPLVKIPFSAMNTYGRSLTR+PSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLV PWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDET
Subject   4898  FSG*HFSVPLTVTEDNK*QTSNGHLYDLEVYTTLSFFGTKAAQSILNTFSLFMNGI*FMSPKKRPSDAPIAKTPSCSKP*CIMYTSSTKTLLYIPLTIKFTTLELTVVALLRPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTNIVVLPPPGGAL*HLYSKDLNDSPTMPHRATFSAPIKLMASWKTSISSHTNRLSPKATTASTSLPLVKIPFSAMNTYGRSLTRRPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDET  6442

Range 4: 4900 to 6060 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
882.7 bits(1920) 0.0 382/387(99%) 0/387(0%) Plus/Plus
Query        3  FHQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRNHQVFQTSNHRAKVLPEQSHQNRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRGRTGRCLWLEI*PSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRTYS*LKKVSLLRAKMSTRW*LWATICSYATIYWFSTMPLI**VH*KSLDAAWWANRLSPSNISAIMLPQVAVRRRC*WTNSLSHPIAQPPLRLMWEVL  1163
                FHQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGR+TSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMR+HQVFQTSNHRAKVLPEQSHQNRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRG TGRCLWLEI PSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRTYS*LKKVSL RAKMSTRW*LWATICSYATIYWFSTMPLI**VH*KSLDAAWWANRLSPSNISAIMLPQVAVRRRC*WTNSLSHPIAQPPLRLMWEVL
Subject   4900  FHQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRRTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRSHQVFQTSNHRAKVLPEQSHQNRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRGHTGRCLWLEILPSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRTYS*LKKVSLPRAKMSTRW*LWATICSYATIYWFSTMPLI**VH*KSLDAAWWANRLSPSNISAIMLPQVAVRRRC*WTNSLSHPIAQPPLRLMWEVL  6060

Range 5: 5095 to 5790 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
517.0 bits(1122) 0.0 228/232(98%) 0/232(0%) Minus/Minus
Query      198  YLFQL*IRTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**RLYF*P*ATPCTSSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLVISHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT  893
                YLFQL*IRTVGLSHA RLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**R YF*P*ATPC SSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLV SHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT
Subject   5095  YLFQL*IRTVGLSHAGRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**RQYF*P*ATPCMSSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLVTSHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT  5790

Range 6: 6257 to 6901 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
453.3 bits(983) 0.0 212/215(99%) 0/215(0%) Plus/Plus
Query     1360  FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWNY**RS*NKR*RVLVHDPXXXXXXXXXXXXKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRSELKVGR*GRHIY*RRVTSISIRRFASHVRPGWLLSRYMSV*ILDRPSK  2004
                FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVL+DRKGNGKVLP*KGR*R*G*TSSKIAVQKANWN+**RS*NKR*RVLVHDPVGEVGYEEVVEGKRKRNTSDDSA*STGKNIQ*CGIV*DEE R*LPIH*TTAYTCWFVETHTLTGLCRSELKVGR*GRHIY*RRVTSISIRRFASHVRPGWLLSRYMSV*ILDRPSK
Subject   6257  FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLSDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWNH**RS*NKR*RVLVHDPVGEVGYEEVVEGKRKRNTSDDSA*STGKNIQ*CGIV*DEECR*LPIH*TTAYTCWFVETHTLTGLCRSELKVGR*GRHIY*RRVTSISIRRFASHVRPGWLLSRYMSV*ILDRPSK  6901

Range 7: 4898 to 5356 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
362.1 bits(784) 0.0 151/153(99%) 0/153(0%) Plus/Plus
Query        1  CFIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EITRCSKPATTEPRCYQNNHT  459
                CFIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEG+LLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*E+TRCSKPATTEPRCYQNNHT
Subject   4898  CFIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGELLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EVTRCSKPATTEPRCYQNNHT  5356

Range 8: 5702 to 6157 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
326.9 bits(707) 0.0 150/152(99%) 0/152(0%) Plus/Plus
Query      805  QVGHRSHFSFNTRRLACERPTVRIHS*KRYLY*GQRCRRGGSFGRQSVRMRRYTGFPRCH*FDRCTESRSMRHGGRIV*VLRI*VL*CSPRWR*DDDVSGRIR*VTQ*HSHHYG*CGKF*GHKYXXXXXXXXXXXXQQCYHS*LQGGKLYRQ  1260
                QVGHRSHFSFNTRR ACERPTVRIHS*KRYLY GQRCRRGGSFGRQSVRMRRYTGFPRCH*FDRCTESRSMRHGGRIV*VLRI*VL*CSPRWR*DDDVSGRIR*VTQ*HSHHYG*CGKF*GHKYGGEEERSEFGRSQQCYHS*LQGGKLYRQ
Subject   5702  QVGHRSHFSFNTRRPACERPTVRIHS*KRYLYQGQRCRRGGSFGRQSVRMRRYTGFPRCH*FDRCTESRSMRHGGRIV*VLRI*VL*CSPRWR*DDDVSGRIR*VTQ*HSHHYG*CGKF*GHKYGGEEERSEFGRSQQCYHS*LQGGKLYRQ  6157

Range 9: 6494 to 6901 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
320.0 bits(692) 0.0 136/136(100%) 0/136(0%) Minus/Minus
Query     1597  LRRSVQNSYAHIPRKQPAGANV*SKASDTD*GDASLIYVPTLSSNFELRAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI  2004
                LRRSVQNSYAHIPRKQPAGANV*SKASDTD*GDASLIYVPTLSSNFELRAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI
Subject   6494  LRRSVQNSYAHIPRKQPAGANV*SKASDTD*GDASLIYVPTLSSNFELRAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI  6901

Range 10: 6100 to 6495 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
309.0 bits(668) 0.0 130/132(98%) 0/132(0%) Plus/Plus
Query     1203  WKVSTVLPQLTPGW*TLSSGECIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQ  1598
                WKVSTVLPQLTPGW*TLSSGECIKGFWWMRCT*CIKAYYN*ASSQ ARRKASFLET*IRYHS*TGRRCLGWIVL LFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQ
Subject   6100  WKVSTVLPQLTPGW*TLSSGECIKGFWWMRCT*CIKAYYN*ASSQSARRKASFLET*IRYHS*TGRRCLGWIVLLLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQ  6495

Range 11: 6112 to 6486 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
276.0 bits(596) 0.0 125/125(100%) 0/125(0%) Minus/Minus
Query     1215  WTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTXXXXXXXXXXXLDASCTPHPPKPFYTFP*R*SLPPWS*LW*HC  1589
                WTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLDASCTPHPPKPFYTFP*R*SLPPWS*LW*HC
Subject   6112  WTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLDASCTPHPPKPFYTFP*R*SLPPWS*LW*HC  6486

Range 12: 6589 to 6903 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
264.5 bits(571) 0.0 104/105(99%) 0/105(0%) Plus/Plus
Query     1692  EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL*AQSWTIRSAHILATRHLNQYPTLCFTRSPRLVAFEVYERMNFGPTFEG  2006
                EKEKKHQ**QCMKHREKHSVMWYCLGRR PMTPYSLNNRIYLLVCRDTHAHWFMPL*AQSWTIRSAHILATRHLNQYPTLCFTRSPRLVAFEVYERMNFGPTFEG
Subject   6589  EKEKKHQ**QCMKHREKHSVMWYCLGRRMPMTPYSLNNRIYLLVCRDTHAHWFMPL*AQSWTIRSAHILATRHLNQYPTLCFTRSPRLVAFEVYERMNFGPTFEG  6903

Range 13: 6619 to 6903 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
221.0 bits(476) 0.0 94/95(99%) 0/95(0%) Minus/Minus
Query     1722  PFEGRSKIHTLIYLESNQPGRTCEAKRRILIEVTRR*YMCRPYRPTLSSERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA  2006
                PFEGRSKIHTLIYLESNQPGRTCEAKRRILIEVTRR*YMCRPYRPTLSSERHKPVSVCVSTNQQVYAVV**IGSHR SSS*TIPHH*MFFPVLHA
Subject   6619  PFEGRSKIHTLIYLESNQPGRTCEAKRRILIEVTRR*YMCRPYRPTLSSERHKPVSVCVSTNQQVYAVV**IGSHRHSSS*TIPHH*MFFPVLHA  6903

Range 14: 5408 to 5650 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
174.3 bits(374) 0.0 79/81(98%) 0/81(0%) Plus/Plus
Query      511  EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*EDVQGVAYG*KYSRHYRRRC  753
                EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*ED+QGVAYG*KY RHYRRRC
Subject   5408  EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*EDIQGVAYG*KYCRHYRRRC  5650

Range 15: 4900 to 5049 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
124.3 bits(265) 0.0 50/50(100%) 0/50(0%) Minus/Minus
Query        3  GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLMK  152
                GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLMK
Subject   4900  GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLMK  5049

Range 16: 5950 to 6072 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.4 bits(239) 0.0 41/41(100%) 0/41(0%) Minus/Minus
Query     1053  YLCPQNFPH*P*WWLCYWVT*RIRPLTSSSYRHLGEHYSTY  1175
                YLCPQNFPH*P*WWLCYWVT*RIRPLTSSSYRHLGEHYSTY
Subject   5950  YLCPQNFPH*P*WWLCYWVT*RIRPLTSSSYRHLGEHYSTY  6072

Range 17: 5839 to 5904 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.0 bits(118) 0.0 22/22(100%) 0/22(0%) Minus/Minus
Query      942  LSVHLSN*WHRGKPVYRRIRTD  1007
                LSVHLSN*WHRGKPVYRRIRTD
Subject   5839  LSVHLSN*WHRGKPVYRRIRTD  5904

Nucleotide Sequence (194 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
20
40
60
80
100
120
140
160
180
194

Descriptions

Alignments

Grapevine leafroll associated virus 3 isolate 3138 07, complete genome

Sequence ID: JX559645.1 Length: 18498 Number of Matches: 10

Range 1: 8590 to 8742 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.8 bits(253) 0.0 48/51(94%) 0/51(0%) Plus/Plus
Query        2  LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPLKLFVKFGASKLNE  154
                LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPLKLFVKFGASK ++
Subject   8590  LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPLKLFVKFGASKTSD  8742

Range 2: 8590 to 8733 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
111.0 bits(236) 0.0 48/48(100%) 0/48(0%) Minus/Minus
Query        2  FGSSKLNEEFKWIGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQ  145
                FGSSKLNEEFKWIGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQ
Subject   8590  FGSSKLNEEFKWIGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQ  8733

Range 3: 8589 to 8732 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
108.3 bits(230) 0.0 48/48(100%) 0/48(0%) Minus/Minus
Query        1  LEAPNLTKSLSGSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLR  144
                LEAPNLTKSLSGSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLR
Subject   8589  LEAPNLTKSLSGSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLR  8732

Range 4: 8591 to 8731 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
107.4 bits(228) 0.0 47/47(100%) 0/47(0%) Minus/Minus
Query        3  WKLQT*RRV*VDREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRS  143
                WKLQT*RRV*VDREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRS
Subject   8591  WKLQT*RRV*VDREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRS  8731

Range 5: 8591 to 8701 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.5 bits(165) 0.0 37/37(100%) 0/37(0%) Plus/Plus
Query        3  *AIILVLT*RYLTKLLLIFVLSF*FKSRIVSFLFPIH  113
                *AIILVLT*RYLTKLLLIFVLSF*FKSRIVSFLFPIH
Subject   8591  *AIILVLT*RYLTKLLLIFVLSF*FKSRIVSFLFPIH  8701

Range 6: 8688 to 8741 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.8 bits(74) 0.0 16/18(89%) 0/18(0%) Plus/Plus
Query      100  CSRST*TLR*VWSFQT*R  153
                CSRST*TLR*VWSFQ  R
Subject   8688  CSRST*TLR*VWSFQNFR  8741

Range 7: 8671 to 8733 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.4 bits(108) 0.0 20/21(95%) 0/21(0%) Plus/Minus
Query      131  FGASKLNEEFKWIGNKKETIL  193
                FG+SKLNEEFKWIGNKKETIL
Subject   8671  FGSSKLNEEFKWIGNKKETIL  8733

Range 8: 8671 to 8742 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.9 bits(107) 0.0 20/24(83%) 0/24(0%) Minus/Plus
Query      122  EDSLFFVPDPLKLFVKFGSSKLNE  193
                EDSLFFVPDPLKLFVKFG+SK ++
Subject   8671  EDSLFFVPDPLKLFVKFGASKTSD  8742

Range 9: 8672 to 8737 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.3 bits(97) 0.0 20/22(91%) 0/22(0%) Minus/Plus
Query      127  RIVSFLFPIHLNSSLSLEAPNL  192
                RIVSFLFPIHLNSSLSLE P L
Subject   8672  RIVSFLFPIHLNSSLSLELPKL  8737

Range 10: 8672 to 8731 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.1 bits(92) 0.0 18/20(90%) 0/20(0%) Plus/Minus
Query      133  WSFQT*RRV*VDREQKRDYP  192
                W  QT*RRV*VDREQKRDYP
Subject   8672  WKLQT*RRV*VDREQKRDYP  8731

Grapevine leafroll associated virus 3, complete genome

Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 10

Range 1: 8011 to 8163 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.8 bits(253) 0.0 48/51(94%) 0/51(0%) Plus/Plus
Query        2  LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPLKLFVKFGASKLNE  154
                LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPLKLFVKFGASK ++
Subject   8011  LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPLKLFVKFGASKTSD  8163

Range 2: 8011 to 8154 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
103.2 bits(219) 0.0 46/48(96%) 0/48(0%) Minus/Minus
Query        2  FGSSKLNEEFKWIGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQ  145
                FGSSKLNEEFKWIGNKKETILDLN*KLRTKI SSLVK LYVKTKIIAQ
Subject   8011  FGSSKLNEEFKWIGNKKETILDLN*KLRTKIWSSLVKNLYVKTKIIAQ  8154

Range 3: 8010 to 8153 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
103.2 bits(219) 0.0 46/48(96%) 0/48(0%) Minus/Minus
Query        1  LEAPNLTKSLSGSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLR  144
                LEAPNLTKSLSGSGTKKRLSST*TKNLEQK GAAWL IFTSKPKLSLR
Subject   8010  LEAPNLTKSLSGSGTKKRLSST*TKNLEQKYGAAWLKIFTSKPKLSLR  8153

Range 4: 8012 to 8152 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.4 bits(215) 0.0 45/47(96%) 0/47(0%) Minus/Minus
Query        3  WKLQT*RRV*VDREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRS  143
                WKLQT*RRV*VDREQKRDYPRLELKT*NKN EQLG* SLRQNQNYRS
Subject   8012  WKLQT*RRV*VDREQKRDYPRLELKT*NKNMEQLG*KSLRQNQNYRS  8152

Range 5: 8012 to 8122 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.5 bits(154) 0.0 35/37(95%) 0/37(0%) Plus/Plus
Query        3  *AIILVLT*RYLTKLLLIFVLSF*FKSRIVSFLFPIH  113
                *AIILVLT*R+LTKLL IFVLSF*FKSRIVSFLFPIH
Subject   8012  *AIILVLT*RFLTKLLHIFVLSF*FKSRIVSFLFPIH  8122

Range 6: 8109 to 8162 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.8 bits(74) 0.0 16/18(89%) 0/18(0%) Plus/Plus
Query      100  CSRST*TLR*VWSFQT*R  153
                CSRST*TLR*VWSFQ  R
Subject   8109  CSRST*TLR*VWSFQNFR  8162

Range 7: 8092 to 8154 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.4 bits(108) 0.0 20/21(95%) 0/21(0%) Plus/Minus
Query      131  FGASKLNEEFKWIGNKKETIL  193
                FG+SKLNEEFKWIGNKKETIL
Subject   8092  FGSSKLNEEFKWIGNKKETIL  8154

Range 8: 8092 to 8163 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.9 bits(107) 0.0 20/24(83%) 0/24(0%) Minus/Plus
Query      122  EDSLFFVPDPLKLFVKFGSSKLNE  193
                EDSLFFVPDPLKLFVKFG+SK ++
Subject   8092  EDSLFFVPDPLKLFVKFGASKTSD  8163

Range 9: 8093 to 8158 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.3 bits(97) 0.0 20/22(91%) 0/22(0%) Minus/Plus
Query      127  RIVSFLFPIHLNSSLSLEAPNL  192
                RIVSFLFPIHLNSSLSLE P L
Subject   8093  RIVSFLFPIHLNSSLSLELPKL  8158

Range 10: 8093 to 8152 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.1 bits(92) 0.0 18/20(90%) 0/20(0%) Plus/Minus
Query      133  WSFQT*RRV*VDREQKRDYP  192
                W  QT*RRV*VDREQKRDYP
Subject   8093  WKLQT*RRV*VDREQKRDYP  8152

Grapevine leafroll associated virus 3 isolate IB 31 RNA dependent RNA polymerase gene, partial cds

Sequence ID: KP844580.1 Length: 954 Number of Matches: 10

Range 1: 794 to 946 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.8 bits(253) 0.0 48/51(94%) 0/51(0%) Plus/Plus
Query        2  LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPLKLFVKFGASKLNE  154
                LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPLKLFVKFGASK ++
Subject    794  LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPLKLFVKFGASKTSD  946

Range 2: 794 to 937 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
111.0 bits(236) 0.0 48/48(100%) 0/48(0%) Minus/Minus
Query        2  FGSSKLNEEFKWIGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQ  145
                FGSSKLNEEFKWIGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQ
Subject    794  FGSSKLNEEFKWIGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQ  937

Range 3: 793 to 936 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
108.3 bits(230) 0.0 48/48(100%) 0/48(0%) Minus/Minus
Query        1  LEAPNLTKSLSGSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLR  144
                LEAPNLTKSLSGSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLR
Subject    793  LEAPNLTKSLSGSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLR  936

Range 4: 795 to 935 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
107.4 bits(228) 0.0 47/47(100%) 0/47(0%) Minus/Minus
Query        3  WKLQT*RRV*VDREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRS  143
                WKLQT*RRV*VDREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRS
Subject    795  WKLQT*RRV*VDREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRS  935

Range 5: 795 to 905 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.5 bits(165) 0.0 37/37(100%) 0/37(0%) Plus/Plus
Query        3  *AIILVLT*RYLTKLLLIFVLSF*FKSRIVSFLFPIH  113
                *AIILVLT*RYLTKLLLIFVLSF*FKSRIVSFLFPIH
Subject    795  *AIILVLT*RYLTKLLLIFVLSF*FKSRIVSFLFPIH  905

Range 6: 892 to 945 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.8 bits(74) 0.0 16/18(89%) 0/18(0%) Plus/Plus
Query      100  CSRST*TLR*VWSFQT*R  153
                CSRST*TLR*VWSFQ  R
Subject    892  CSRST*TLR*VWSFQNFR  945

Range 7: 875 to 937 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.4 bits(108) 0.0 20/21(95%) 0/21(0%) Plus/Minus
Query      131  FGASKLNEEFKWIGNKKETIL  193
                FG+SKLNEEFKWIGNKKETIL
Subject    875  FGSSKLNEEFKWIGNKKETIL  937

Range 8: 875 to 946 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.9 bits(107) 0.0 20/24(83%) 0/24(0%) Minus/Plus
Query      122  EDSLFFVPDPLKLFVKFGSSKLNE  193
                EDSLFFVPDPLKLFVKFG+SK ++
Subject    875  EDSLFFVPDPLKLFVKFGASKTSD  946

Range 9: 876 to 953 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.3 bits(99) 0.0 21/26(81%) 0/26(0%) Minus/Plus
Query      115  RIVSFLFPIHLNSSLSLEAPNLTKSL  192
                RIVSFLFPIHLNSSLSLE P L  S+
Subject    876  RIVSFLFPIHLNSSLSLELPKLQISI  953

Range 10: 876 to 935 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.1 bits(92) 0.0 18/20(90%) 0/20(0%) Plus/Minus
Query      133  WSFQT*RRV*VDREQKRDYP  192
                W  QT*RRV*VDREQKRDYP
Subject    876  WKLQT*RRV*VDREQKRDYP  935

Grapevine leafroll associated virus 3, complete genome

Sequence ID: AF037268.2 Length: 17919 Number of Matches: 10

Range 1: 8011 to 8163 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.8 bits(253) 0.0 48/51(94%) 0/51(0%) Plus/Plus
Query        2  LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPLKLFVKFGASKLNE  154
                LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPLKLFVKFGASK ++
Subject   8011  LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPLKLFVKFGASKTSD  8163

Range 2: 8011 to 8154 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
103.2 bits(219) 0.0 46/48(96%) 0/48(0%) Minus/Minus
Query        2  FGSSKLNEEFKWIGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQ  145
                FGSSKLNEEFKWIGNKKETILDLN*KLRTKI SSLVK LYVKTKIIAQ
Subject   8011  FGSSKLNEEFKWIGNKKETILDLN*KLRTKIWSSLVKNLYVKTKIIAQ  8154

Range 3: 8010 to 8153 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
103.2 bits(219) 0.0 46/48(96%) 0/48(0%) Minus/Minus
Query        1  LEAPNLTKSLSGSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLR  144
                LEAPNLTKSLSGSGTKKRLSST*TKNLEQK GAAWL IFTSKPKLSLR
Subject   8010  LEAPNLTKSLSGSGTKKRLSST*TKNLEQKYGAAWLKIFTSKPKLSLR  8153

Range 4: 8012 to 8152 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.4 bits(215) 0.0 45/47(96%) 0/47(0%) Minus/Minus
Query        3  WKLQT*RRV*VDREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRS  143
                WKLQT*RRV*VDREQKRDYPRLELKT*NKN EQLG* SLRQNQNYRS
Subject   8012  WKLQT*RRV*VDREQKRDYPRLELKT*NKNMEQLG*KSLRQNQNYRS  8152

Range 5: 8012 to 8122 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.5 bits(154) 0.0 35/37(95%) 0/37(0%) Plus/Plus
Query        3  *AIILVLT*RYLTKLLLIFVLSF*FKSRIVSFLFPIH  113
                *AIILVLT*R+LTKLL IFVLSF*FKSRIVSFLFPIH
Subject   8012  *AIILVLT*RFLTKLLHIFVLSF*FKSRIVSFLFPIH  8122

Range 6: 8109 to 8162 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.8 bits(74) 0.0 16/18(89%) 0/18(0%) Plus/Plus
Query      100  CSRST*TLR*VWSFQT*R  153
                CSRST*TLR*VWSFQ  R
Subject   8109  CSRST*TLR*VWSFQNFR  8162

Range 7: 8092 to 8154 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.4 bits(108) 0.0 20/21(95%) 0/21(0%) Plus/Minus
Query      131  FGASKLNEEFKWIGNKKETIL  193
                FG+SKLNEEFKWIGNKKETIL
Subject   8092  FGSSKLNEEFKWIGNKKETIL  8154

Range 8: 8092 to 8163 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.9 bits(107) 0.0 20/24(83%) 0/24(0%) Minus/Plus
Query      122  EDSLFFVPDPLKLFVKFGSSKLNE  193
                EDSLFFVPDPLKLFVKFG+SK ++
Subject   8092  EDSLFFVPDPLKLFVKFGASKTSD  8163

Range 9: 8093 to 8158 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.3 bits(97) 0.0 20/22(91%) 0/22(0%) Minus/Plus
Query      127  RIVSFLFPIHLNSSLSLEAPNL  192
                RIVSFLFPIHLNSSLSLE P L
Subject   8093  RIVSFLFPIHLNSSLSLELPKL  8158

Range 10: 8093 to 8152 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.1 bits(92) 0.0 18/20(90%) 0/20(0%) Plus/Minus
Query      133  WSFQT*RRV*VDREQKRDYP  192
                W  QT*RRV*VDREQKRDYP
Subject   8093  WKLQT*RRV*VDREQKRDYP  8152

Grapevine leafroll associated virus 3 isolate 621, complete genome

Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 10

Range 1: 8590 to 8742 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.8 bits(253) 0.0 48/51(94%) 0/51(0%) Plus/Plus
Query        2  LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPLKLFVKFGASKLNE  154
                LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPLKLFVKFGASK ++
Subject   8590  LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPLKLFVKFGASKTSD  8742

Range 2: 8590 to 8733 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
111.0 bits(236) 0.0 48/48(100%) 0/48(0%) Minus/Minus
Query        2  FGSSKLNEEFKWIGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQ  145
                FGSSKLNEEFKWIGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQ
Subject   8590  FGSSKLNEEFKWIGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQ  8733

Range 3: 8589 to 8732 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
108.3 bits(230) 0.0 48/48(100%) 0/48(0%) Minus/Minus
Query        1  LEAPNLTKSLSGSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLR  144
                LEAPNLTKSLSGSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLR
Subject   8589  LEAPNLTKSLSGSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLR  8732

Range 4: 8591 to 8731 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
107.4 bits(228) 0.0 47/47(100%) 0/47(0%) Minus/Minus
Query        3  WKLQT*RRV*VDREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRS  143
                WKLQT*RRV*VDREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRS
Subject   8591  WKLQT*RRV*VDREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRS  8731

Range 5: 8591 to 8701 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.5 bits(165) 0.0 37/37(100%) 0/37(0%) Plus/Plus
Query        3  *AIILVLT*RYLTKLLLIFVLSF*FKSRIVSFLFPIH  113
                *AIILVLT*RYLTKLLLIFVLSF*FKSRIVSFLFPIH
Subject   8591  *AIILVLT*RYLTKLLLIFVLSF*FKSRIVSFLFPIH  8701

Range 6: 8688 to 8741 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.8 bits(74) 0.0 16/18(89%) 0/18(0%) Plus/Plus
Query      100  CSRST*TLR*VWSFQT*R  153
                CSRST*TLR*VWSFQ  R
Subject   8688  CSRST*TLR*VWSFQNFR  8741

Range 7: 8671 to 8733 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.4 bits(108) 0.0 20/21(95%) 0/21(0%) Plus/Minus
Query      131  FGASKLNEEFKWIGNKKETIL  193
                FG+SKLNEEFKWIGNKKETIL
Subject   8671  FGSSKLNEEFKWIGNKKETIL  8733

Range 8: 8671 to 8742 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.9 bits(107) 0.0 20/24(83%) 0/24(0%) Minus/Plus
Query      122  EDSLFFVPDPLKLFVKFGSSKLNE  193
                EDSLFFVPDPLKLFVKFG+SK ++
Subject   8671  EDSLFFVPDPLKLFVKFGASKTSD  8742

Range 9: 8672 to 8737 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.3 bits(97) 0.0 20/22(91%) 0/22(0%) Minus/Plus
Query      127  RIVSFLFPIHLNSSLSLEAPNL  192
                RIVSFLFPIHLNSSLSLE P L
Subject   8672  RIVSFLFPIHLNSSLSLELPKL  8737

Range 10: 8672 to 8731 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.1 bits(92) 0.0 18/20(90%) 0/20(0%) Plus/Minus
Query      133  WSFQT*RRV*VDREQKRDYP  192
                W  QT*RRV*VDREQKRDYP
Subject   8672  WKLQT*RRV*VDREQKRDYP  8731

Nucleotide Sequence (164 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
17
34
51
68
85
102
119
136
153
164

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
118.4 440.5 35% 5.482e-26 96% KM058745.1

Alignments

Grapevine leafroll associated virus 3 isolate GH24, complete genome

Sequence ID: KM058745.1 Length: 18493 Number of Matches: 7

Range 1: 548 to 709 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.4 bits(252) 0.0 52/54(96%) 0/54(0%) Plus/Minus
Query        1  ER*ANRTTLNKNRRERNS*KIRKRVLQTRP*IKLEEKVLTLRKG*KYYQHHKRK  162
                ER*ANRTTLNKNRRERNS*KIRK+VLQTRP*IKLEEKVLTLRKG KYYQHHKRK
Subject    548  ER*ANRTTLNKNRRERNS*KIRKKVLQTRP*IKLEEKVLTLRKGKKYYQHHKRK  709

Range 2: 546 to 638 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.9 bits(168) 0.0 30/31(97%) 0/31(0%) Minus/Plus
Query       72  FFLLWCW*YFYPFLKVSTFSSNFI*GRVCKT  164
                FFLLWCW*YF+PFLKVSTFSSNFI*GRVCKT
Subject    546  FFLLWCW*YFFPFLKVSTFSSNFI*GRVCKT  638

Range 3: 614 to 709 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.2 bits(112) 0.0 31/32(97%) 0/32(0%) Minus/Plus
Query        1  YLGSCL*NPFPYFLAXXXXXXXX*CGPICLPF  96
                YLGSCL*N FPYFLAISFSSIFI*CGPICLPF
Subject    614  YLGSCL*NLFPYFLAISFSSIFI*CGPICLPF  709

Range 4: 546 to 638 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.1 bits(151) 0.0 30/31(97%) 0/31(0%) Plus/Minus
Query       72  GFTNTTLNKVRRESADFKKRIEILPTPQKKK  164
                GFTNTTLNKVRRESADFKKR EILPTPQKKK
Subject    546  GFTNTTLNKVRRESADFKKRKEILPTPQKKK  638

Range 5: 685 to 708 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.0 bits(46) 0.0 8/8(100%) 0/8(0%) Plus/Minus
Query        2  KGKQIGPH  25
                KGKQIGPH
Subject    685  KGKQIGPH  708

Range 6: 547 to 636 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.9 bits(144) 0.0 29/30(97%) 0/30(0%) Plus/Minus
Query       74  FYKHDPK*S*KRKC*L*EKDRNTTNTTKEK  163
                FYKHDPK*S*KRKC*L*EK+RNTTNTTKEK
Subject    547  FYKHDPK*S*KRKC*L*EKERNTTNTTKEK  636

Range 7: 678 to 707 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.1 bits(44) 0.0 10/10(100%) 0/10(0%) Plus/Minus
Query        3  KVSK*DHTK*  32
                KVSK*DHTK*
Subject    678  KVSK*DHTK*  707

Nucleotide Sequence (507 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
51
102
153
204
255
306
357
408
459
507

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
377.7 2038.1 23% 5.788e-103 97% EU344893.1
376.3 2039.9 23% 1.501e-102 97% GU983863.1
375.9 2033.1 23% 2.062e-102 96% JX559645.1
375.9 2028.5 23% 2.062e-102 96% KX756669.1
372.7 2031.2 23% 1.905e-101 96% NC_004667.1

Alignments

Grapevine leafroll associated virus 3 isolate Cl 766, complete genome

Sequence ID: EU344893.1 Length: 17919 Number of Matches: 9

Range 1: 11661 to 12146 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
377.7 bits(818) 0.0 160/162(99%) 0/162(0%) Plus/Plus
Query        8  GFSDLRIEENFLKSAVDTDTILNG*IYLCNGDIKP*RG*RRGILGSE*GIYWTGRALLFESW**VHRCLGKLCCED*WIYVDFAIYDRCFRVFLVERRIDYHAL*PNKL*ELGQVI*GFKRVFQDPN*R*DLCIAFCGQQSSKERQG*HHGSESTTIAIGRQ  493
                GFSDLRIEENFLKSAVDTDTILNG*IYLCNGDIKP*RG*RRGILGSE*GIYWTGRALLFESW**VHRCLGKLCCED*WIYVDFAIYDRCFRVFLVERRIDYHAL*PNKL*ELGQVI*GFKRVFQDPN*R*DLC+AFCGQQSSKERQG*HHGSESTTIAIGR+
Subject  11661  GFSDLRIEENFLKSAVDTDTILNG*IYLCNGDIKP*RG*RRGILGSE*GIYWTGRALLFESW**VHRCLGKLCCED*WIYVDFAIYDRCFRVFLVERRIDYHAL*PNKL*ELGQVI*GFKRVFQDPN*R*DLCVAFCGQQSSKERQG*HHGSESTTIAIGRR  12146

Range 2: 11662 to 12144 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
373.1 bits(808) 0.0 161/161(100%) 0/161(0%) Plus/Plus
Query        9  GSRI*G*KKIF*NPP*IQIRF*MDKYIYVTGILNPNEARDEVFSVVNKGYIGPGGRSFSNRGSKYTVVWENSAARISGFTSTSQSTIDAFAYFLLKGGLTTTLSNPINCENWVRSSKDLSAFFRTLIKGKIYASRSVDSNLPKKDRDDIMEASRRLSPSDA  491
                GSRI*G*KKIF*NPP*IQIRF*MDKYIYVTGILNPNEARDEVFSVVNKGYIGPGGRSFSNRGSKYTVVWENSAARISGFTSTSQSTIDAFAYFLLKGGLTTTLSNPINCENWVRSSKDLSAFFRTLIKGKIYASRSVDSNLPKKDRDDIMEASRRLSPSDA
Subject  11662  GSRI*G*KKIF*NPP*IQIRF*MDKYIYVTGILNPNEARDEVFSVVNKGYIGPGGRSFSNRGSKYTVVWENSAARISGFTSTSQSTIDAFAYFLLKGGLTTTLSNPINCENWVRSSKDLSAFFRTLIKGKIYASRSVDSNLPKKDRDDIMEASRRLSPSDA  12144

Range 3: 11661 to 12143 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
331.4 bits(717) 0.0 160/161(99%) 0/161(0%) Minus/Minus
Query        8  ASDGDXXXXXXXXXXXXXFGRLLSTERDA*ILPLIRVLKNALKSLDDLTQFSQFIGLESVVVNPPFNKKYAKASIVDCEVDVNPLILAAEFSQTTVYLLPRFEKERPPGPIYPLFTTENTSSLASLGFNIPVT*IYLSIQNRICIYGGFQKIFFYP*IREP  490
                ASDGDSRRLASMMSSLSFFGRLLSTERDA*ILPLIRVLKNALKSLDDLTQFSQFIGLESVVVNPPFNKKYAKASIVDCEVDVNPLILAAEFSQTTVYLLPRFEKERPPGPIYPLFTTENTSSLASLGFNIPVT*IYLSIQNRICIYGGF KIFFYP*IREP
Subject  11661  ASDGDSRRLASMMSSLSFFGRLLSTERDA*ILPLIRVLKNALKSLDDLTQFSQFIGLESVVVNPPFNKKYAKASIVDCEVDVNPLILAAEFSQTTVYLLPRFEKERPPGPIYPLFTTENTSSLASLGFNIPVT*IYLSIQNRICIYGGF*KIFFYP*IREP  12143

Range 4: 11798 to 12142 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
264.5 bits(571) 0.0 114/115(99%) 0/115(0%) Minus/Minus
Query      145  RPMAIVVDSLP*CHPCLSLEDCCPQNAMHKSYL*LGS*KTRLNP*MT*PNSHSLLG*RAW*SIRLSTRNTRKHLS*IAKST*IH*SSQQSFPRQRCTYYHDSKRSALPVQYIPYS  489
                RPMAIVVDSLP*CHPCLSLEDCCPQNA HKSYL*LGS*KTRLNP*MT*PNSHSLLG*RAW*SIRLSTRNTRKHLS*IAKST*IH*SSQQSFPRQRCTYYHDSKRSALPVQYIPYS
Subject  11798  RPMAIVVDSLP*CHPCLSLEDCCPQNATHKSYL*LGS*KTRLNP*MT*PNSHSLLG*RAW*SIRLSTRNTRKHLS*IAKST*IH*SSQQSFPRQRCTYYHDSKRSALPVQYIPYS  12142

Range 5: 11654 to 11755 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.0 bits(166) 0.0 33/34(97%) 0/34(0%) Minus/Minus
Query        1  SPLHKYIYPFKIVSVSTADFKKFSSILKSENPKS  102
                SPLHKYIYPFKIVSVSTADFKKFSSILKSENP S
Subject  11654  SPLHKYIYPFKIVSVSTADFKKFSSILKSENPLS  11755

Range 6: 11659 to 11880 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
171.1 bits(367) 0.0 73/74(99%) 0/74(0%) Minus/Minus
Query        6  SRVFPDNGVLTTTIRKGAPSRSNISLIHYREYLVSSLVRV*YPRYINIFIHSKSYLYLRRISKNFLLSLNPRTP  227
                SRVFPDNGVLTTTIRKGAPSRSNISLIHYREYLVSSLVRV*YPRYINIFIHSKSYLYLRRI KNFLLSLNPRTP
Subject  11659  SRVFPDNGVLTTTIRKGAPSRSNISLIHYREYLVSSLVRV*YPRYINIFIHSKSYLYLRRILKNFLLSLNPRTP  11880

Range 7: 11935 to 12144 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
162.4 bits(348) 0.0 69/70(99%) 0/70(0%) Minus/Minus
Query      282  GVRWR*SSTRFHDVIPVFLWKIAVHRTRCINLTFN*GPEKRA*ILR*PDPILTVYWVRERGSQSAFQQEI  491
                GVRWR*SSTRFHDVIPVFLWKIAVHRTR INLTFN*GPEKRA*ILR*PDPILTVYWVRERGSQSAFQQEI
Subject  11935  GVRWR*SSTRFHDVIPVFLWKIAVHRTRRINLTFN*GPEKRA*ILR*PDPILTVYWVRERGSQSAFQQEI  12144

Range 8: 11936 to 12145 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
160.5 bits(344) 0.0 69/70(99%) 0/70(0%) Plus/Plus
Query      283  ISC*KAD*LPRSLTQ*TVRIGSGHLRI*ARFSGP*LKVRFMHRVLWTAIFQRKTGMTSWKRVDDYRHRTP  492
                ISC*KAD*LPRSLTQ*TVRIGSGHLRI*ARFSGP*LKVRFM RVLWTAIFQRKTGMTSWKRVDDYRHRTP
Subject  11936  ISC*KAD*LPRSLTQ*TVRIGSGHLRI*ARFSGP*LKVRFMRRVLWTAIFQRKTGMTSWKRVDDYRHRTP  12145

Range 9: 11720 to 11875 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.4 bits(252) 0.0 52/52(100%) 0/52(0%) Plus/Plus
Query       67  DFEWINIFM*RGY*TLTRLETRYSR**IRDILDREGAPFRIVVVSTPLSGKT  222
                DFEWINIFM*RGY*TLTRLETRYSR**IRDILDREGAPFRIVVVSTPLSGKT
Subject  11720  DFEWINIFM*RGY*TLTRLETRYSR**IRDILDREGAPFRIVVVSTPLSGKT  11875

Grapevine leafroll associated virus 3 isolate WA MR, complete genome

Sequence ID: GU983863.1 Length: 18498 Number of Matches: 9

Range 1: 12240 to 12725 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
376.3 bits(815) 0.0 160/162(99%) 0/162(0%) Plus/Plus
Query        8  GFSDLRIEENFLKSAVDTDTILNG*IYLCNGDIKP*RG*RRGILGSE*GIYWTGRALLFESW**VHRCLGKLCCED*WIYVDFAIYDRCFRVFLVERRIDYHAL*PNKL*ELGQVI*GFKRVFQDPN*R*DLCIAFCGQQSSKERQG*HHGSESTTIAIGRQ  493
                GFSDLRIEENFLKSAVDTDTILNG*IYLCNGDIKP*RG*RRGILGSE*GIYWTGRALLF+SW**VHRCLGKLCCED*WIYVDFAIYDRCFRVFLVERRIDYHAL*PNKL*ELGQVI*GFKRVFQDPN*R*DLCIAFCGQQSSKERQG*HHGSESTTIAIGR+
Subject  12240  GFSDLRIEENFLKSAVDTDTILNG*IYLCNGDIKP*RG*RRGILGSE*GIYWTGRALLFKSW**VHRCLGKLCCED*WIYVDFAIYDRCFRVFLVERRIDYHAL*PNKL*ELGQVI*GFKRVFQDPN*R*DLCIAFCGQQSSKERQG*HHGSESTTIAIGRR  12725

Range 2: 12241 to 12723 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
373.1 bits(808) 0.0 161/161(100%) 0/161(0%) Plus/Plus
Query        9  GSRI*G*KKIF*NPP*IQIRF*MDKYIYVTGILNPNEARDEVFSVVNKGYIGPGGRSFSNRGSKYTVVWENSAARISGFTSTSQSTIDAFAYFLLKGGLTTTLSNPINCENWVRSSKDLSAFFRTLIKGKIYASRSVDSNLPKKDRDDIMEASRRLSPSDA  491
                GSRI*G*KKIF*NPP*IQIRF*MDKYIYVTGILNPNEARDEVFSVVNKGYIGPGGRSFSNRGSKYTVVWENSAARISGFTSTSQSTIDAFAYFLLKGGLTTTLSNPINCENWVRSSKDLSAFFRTLIKGKIYASRSVDSNLPKKDRDDIMEASRRLSPSDA
Subject  12241  GSRI*G*KKIF*NPP*IQIRF*MDKYIYVTGILNPNEARDEVFSVVNKGYIGPGGRSFSNRGSKYTVVWENSAARISGFTSTSQSTIDAFAYFLLKGGLTTTLSNPINCENWVRSSKDLSAFFRTLIKGKIYASRSVDSNLPKKDRDDIMEASRRLSPSDA  12723

Range 3: 12240 to 12722 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
331.4 bits(717) 0.0 160/161(99%) 0/161(0%) Minus/Minus
Query        8  ASDGDXXXXXXXXXXXXXFGRLLSTERDA*ILPLIRVLKNALKSLDDLTQFSQFIGLESVVVNPPFNKKYAKASIVDCEVDVNPLILAAEFSQTTVYLLPRFEKERPPGPIYPLFTTENTSSLASLGFNIPVT*IYLSIQNRICIYGGFQKIFFYP*IREP  490
                ASDGDSRRLASMMSSLSFFGRLLSTERDA*ILPLIRVLKNALKSLDDLTQFSQFIGLESVVVNPPFNKKYAKASIVDCEVDVNPLILAAEFSQTTVYLLPRFEKERPPGPIYPLFTTENTSSLASLGFNIPVT*IYLSIQNRICIYGGF KIFFYP*IREP
Subject  12240  ASDGDSRRLASMMSSLSFFGRLLSTERDA*ILPLIRVLKNALKSLDDLTQFSQFIGLESVVVNPPFNKKYAKASIVDCEVDVNPLILAAEFSQTTVYLLPRFEKERPPGPIYPLFTTENTSSLASLGFNIPVT*IYLSIQNRICIYGGF*KIFFYP*IREP  12722

Range 4: 12377 to 12721 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
264.5 bits(571) 0.0 114/115(99%) 0/115(0%) Minus/Minus
Query      145  RPMAIVVDSLP*CHPCLSLEDCCPQNAMHKSYL*LGS*KTRLNP*MT*PNSHSLLG*RAW*SIRLSTRNTRKHLS*IAKST*IH*SSQQSFPRQRCTYYHDSKRSALPVQYIPYS  489
                RPMAIVVDSLP*CHPCLSLEDCCPQNAMHKSYL*LGS*KTRLNP*MT*PNSHSLLG*RAW*SIRLSTRNTRKHLS*IAKST*IH*SSQQSFPRQRCTYYHD KRSALPVQYIPYS
Subject  12377  RPMAIVVDSLP*CHPCLSLEDCCPQNAMHKSYL*LGS*KTRLNP*MT*PNSHSLLG*RAW*SIRLSTRNTRKHLS*IAKST*IH*SSQQSFPRQRCTYYHDLKRSALPVQYIPYS  12721

Range 5: 12233 to 12334 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.0 bits(166) 0.0 33/34(97%) 0/34(0%) Minus/Minus
Query        1  SPLHKYIYPFKIVSVSTADFKKFSSILKSENPKS  102
                SPLHKYIYPFKIVSVSTADFKKFSSILKSENP S
Subject  12233  SPLHKYIYPFKIVSVSTADFKKFSSILKSENPLS  12334

Range 6: 12514 to 12723 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
167.9 bits(360) 0.0 70/70(100%) 0/70(0%) Minus/Minus
Query      282  GVRWR*SSTRFHDVIPVFLWKIAVHRTRCINLTFN*GPEKRA*ILR*PDPILTVYWVRERGSQSAFQQEI  491
                GVRWR*SSTRFHDVIPVFLWKIAVHRTRCINLTFN*GPEKRA*ILR*PDPILTVYWVRERGSQSAFQQEI
Subject  12514  GVRWR*SSTRFHDVIPVFLWKIAVHRTRCINLTFN*GPEKRA*ILR*PDPILTVYWVRERGSQSAFQQEI  12723

Range 7: 12238 to 12459 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
166.9 bits(358) 0.0 72/74(97%) 0/74(0%) Minus/Minus
Query        6  SRVFPDNGVLTTTIRKGAPSRSNISLIHYREYLVSSLVRV*YPRYINIFIHSKSYLYLRRISKNFLLSLNPRTP  227
                SRVFPDNGVLTTTI KGAPSRSNISLIHYREYLVSSLVRV*YPRYINIFIHSKSYLYLRRI KNFLLSLNPRTP
Subject  12238  SRVFPDNGVLTTTI*KGAPSRSNISLIHYREYLVSSLVRV*YPRYINIFIHSKSYLYLRRILKNFLLSLNPRTP  12459

Range 8: 12515 to 12724 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
164.2 bits(352) 0.0 70/70(100%) 0/70(0%) Plus/Plus
Query      283  ISC*KAD*LPRSLTQ*TVRIGSGHLRI*ARFSGP*LKVRFMHRVLWTAIFQRKTGMTSWKRVDDYRHRTP  492
                ISC*KAD*LPRSLTQ*TVRIGSGHLRI*ARFSGP*LKVRFMHRVLWTAIFQRKTGMTSWKRVDDYRHRTP
Subject  12515  ISC*KAD*LPRSLTQ*TVRIGSGHLRI*ARFSGP*LKVRFMHRVLWTAIFQRKTGMTSWKRVDDYRHRTP  12724

Range 9: 12299 to 12454 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
116.5 bits(248) 0.0 51/52(98%) 0/52(0%) Plus/Plus
Query       67  DFEWINIFM*RGY*TLTRLETRYSR**IRDILDREGAPFRIVVVSTPLSGKT  222
                DFEWINIFM*RGY*TLTRLETRYSR**IRDILDREGAPF+IVVVSTPLSGKT
Subject  12299  DFEWINIFM*RGY*TLTRLETRYSR**IRDILDREGAPFQIVVVSTPLSGKT  12454

Grapevine leafroll associated virus 3 isolate 3138 07, complete genome

Sequence ID: JX559645.1 Length: 18498 Number of Matches: 9

Range 1: 12240 to 12725 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
375.9 bits(814) 0.0 160/162(99%) 0/162(0%) Plus/Plus
Query        8  GFSDLRIEENFLKSAVDTDTILNG*IYLCNGDIKP*RG*RRGILGSE*GIYWTGRALLFESW**VHRCLGKLCCED*WIYVDFAIYDRCFRVFLVERRIDYHAL*PNKL*ELGQVI*GFKRVFQDPN*R*DLCIAFCGQQSSKERQG*HHGSESTTIAIGRQ  493
                GFSDLRIEENFLKSAVDTDTILNG*IYLCNGDIKP*RG*RRGILGSE*GIYW GRALLFESW**VHRCLGKLCCED*WIYVDFAIYDRCFRVFLVERRIDYHAL*PNKL*ELGQVI*GFKRVFQDPN*R*DLCIAFCGQQSSKERQG*HHGSESTTIAIGR+
Subject  12240  GFSDLRIEENFLKSAVDTDTILNG*IYLCNGDIKP*RG*RRGILGSE*GIYWAGRALLFESW**VHRCLGKLCCED*WIYVDFAIYDRCFRVFLVERRIDYHAL*PNKL*ELGQVI*GFKRVFQDPN*R*DLCIAFCGQQSSKERQG*HHGSESTTIAIGRR  12725

Range 2: 12241 to 12723 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
370.8 bits(803) 0.0 160/161(99%) 0/161(0%) Plus/Plus
Query        9  GSRI*G*KKIF*NPP*IQIRF*MDKYIYVTGILNPNEARDEVFSVVNKGYIGPGGRSFSNRGSKYTVVWENSAARISGFTSTSQSTIDAFAYFLLKGGLTTTLSNPINCENWVRSSKDLSAFFRTLIKGKIYASRSVDSNLPKKDRDDIMEASRRLSPSDA  491
                GSRI*G*KKIF*NPP*IQIRF*MDKYIYVTGILNPNEARDEVFSVVNKGYIGPGGRSFS+RGSKYTVVWENSAARISGFTSTSQSTIDAFAYFLLKGGLTTTLSNPINCENWVRSSKDLSAFFRTLIKGKIYASRSVDSNLPKKDRDDIMEASRRLSPSDA
Subject  12241  GSRI*G*KKIF*NPP*IQIRF*MDKYIYVTGILNPNEARDEVFSVVNKGYIGPGGRSFSSRGSKYTVVWENSAARISGFTSTSQSTIDAFAYFLLKGGLTTTLSNPINCENWVRSSKDLSAFFRTLIKGKIYASRSVDSNLPKKDRDDIMEASRRLSPSDA  12723

Range 3: 12240 to 12722 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
328.7 bits(711) 0.0 159/161(99%) 0/161(0%) Minus/Minus
Query        8  ASDGDXXXXXXXXXXXXXFGRLLSTERDA*ILPLIRVLKNALKSLDDLTQFSQFIGLESVVVNPPFNKKYAKASIVDCEVDVNPLILAAEFSQTTVYLLPRFEKERPPGPIYPLFTTENTSSLASLGFNIPVT*IYLSIQNRICIYGGFQKIFFYP*IREP  490
                ASDGDSRRLASMMSSLSFFGRLLSTERDA*ILPLIRVLKNALKSLDDLTQFSQFIGLESVVVNPPFNKKYAKASIVDCEVDVNPLILAAEFSQTTVYLLPR EKERPPGPIYPLFTTENTSSLASLGFNIPVT*IYLSIQNRICIYGGF KIFFYP*IREP
Subject  12240  ASDGDSRRLASMMSSLSFFGRLLSTERDA*ILPLIRVLKNALKSLDDLTQFSQFIGLESVVVNPPFNKKYAKASIVDCEVDVNPLILAAEFSQTTVYLLPRLEKERPPGPIYPLFTTENTSSLASLGFNIPVT*IYLSIQNRICIYGGF*KIFFYP*IREP  12722

Range 4: 12377 to 12721 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
265.5 bits(573) 0.0 114/115(99%) 0/115(0%) Minus/Minus
Query      145  RPMAIVVDSLP*CHPCLSLEDCCPQNAMHKSYL*LGS*KTRLNP*MT*PNSHSLLG*RAW*SIRLSTRNTRKHLS*IAKST*IH*SSQQSFPRQRCTYYHDSKRSALPVQYIPYS  489
                RPMAIVVDSLP*CHPCLSLEDCCPQNAMHKSYL*LGS*KTRLNP*MT*PNSHSLLG*RAW*SIRLSTRNTRKHLS*IAKST*IH*SSQQSFPRQRCTYYHDSKRSALP QYIPYS
Subject  12377  RPMAIVVDSLP*CHPCLSLEDCCPQNAMHKSYL*LGS*KTRLNP*MT*PNSHSLLG*RAW*SIRLSTRNTRKHLS*IAKST*IH*SSQQSFPRQRCTYYHDSKRSALPAQYIPYS  12721

Range 5: 12233 to 12334 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.0 bits(166) 0.0 33/34(97%) 0/34(0%) Minus/Minus
Query        1  SPLHKYIYPFKIVSVSTADFKKFSSILKSENPKS  102
                SPLHKYIYPFKIVSVSTADFKKFSSILKSENP S
Subject  12233  SPLHKYIYPFKIVSVSTADFKKFSSILKSENPLS  12334

Range 6: 12514 to 12723 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
167.9 bits(360) 0.0 70/70(100%) 0/70(0%) Minus/Minus
Query      282  GVRWR*SSTRFHDVIPVFLWKIAVHRTRCINLTFN*GPEKRA*ILR*PDPILTVYWVRERGSQSAFQQEI  491
                GVRWR*SSTRFHDVIPVFLWKIAVHRTRCINLTFN*GPEKRA*ILR*PDPILTVYWVRERGSQSAFQQEI
Subject  12514  GVRWR*SSTRFHDVIPVFLWKIAVHRTRCINLTFN*GPEKRA*ILR*PDPILTVYWVRERGSQSAFQQEI  12723

Range 7: 12238 to 12459 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
166.5 bits(357) 0.0 71/74(96%) 0/74(0%) Minus/Minus
Query        6  SRVFPDNGVLTTTIRKGAPSRSNISLIHYREYLVSSLVRV*YPRYINIFIHSKSYLYLRRISKNFLLSLNPRTP  227
                SRVFPDNGVLTTT RKGAPSR NISLIHYREYLVSSLVRV*YPRYINIFIHSKSYLYLRRI KNFLLSLNPRTP
Subject  12238  SRVFPDNGVLTTTTRKGAPSRPNISLIHYREYLVSSLVRV*YPRYINIFIHSKSYLYLRRILKNFLLSLNPRTP  12459

Range 8: 12515 to 12724 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
164.2 bits(352) 0.0 70/70(100%) 0/70(0%) Plus/Plus
Query      283  ISC*KAD*LPRSLTQ*TVRIGSGHLRI*ARFSGP*LKVRFMHRVLWTAIFQRKTGMTSWKRVDDYRHRTP  492
                ISC*KAD*LPRSLTQ*TVRIGSGHLRI*ARFSGP*LKVRFMHRVLWTAIFQRKTGMTSWKRVDDYRHRTP
Subject  12515  ISC*KAD*LPRSLTQ*TVRIGSGHLRI*ARFSGP*LKVRFMHRVLWTAIFQRKTGMTSWKRVDDYRHRTP  12724

Range 9: 12299 to 12454 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
114.7 bits(244) 0.0 50/52(96%) 0/52(0%) Plus/Plus
Query       67  DFEWINIFM*RGY*TLTRLETRYSR**IRDILDREGAPFRIVVVSTPLSGKT  222
                DFEWINIFM*RGY*TLTRLETRYSR**IRDIL REGAPFR+VVVSTPLSGKT
Subject  12299  DFEWINIFM*RGY*TLTRLETRYSR**IRDILGREGAPFRVVVVSTPLSGKT  12454

Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome

Sequence ID: KX756669.1 Length: 18313 Number of Matches: 9

Range 1: 12055 to 12540 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
375.9 bits(814) 0.0 160/162(99%) 0/162(0%) Plus/Plus
Query        8  GFSDLRIEENFLKSAVDTDTILNG*IYLCNGDIKP*RG*RRGILGSE*GIYWTGRALLFESW**VHRCLGKLCCED*WIYVDFAIYDRCFRVFLVERRIDYHAL*PNKL*ELGQVI*GFKRVFQDPN*R*DLCIAFCGQQSSKERQG*HHGSESTTIAIGRQ  493
                GFSDLRIEENFLKSAVDTDTILNG*IYLCNGDIKP*RG*RRGILGSE*GIYW GRALLFESW**VHRCLGKLCCED*WIYVDFAIYDRCFRVFLVERRIDYHAL*PNKL*ELGQVI*GFKRVFQDPN*R*DLCIAFCGQQSSKERQG*HHGSESTTIAIGR+
Subject  12055  GFSDLRIEENFLKSAVDTDTILNG*IYLCNGDIKP*RG*RRGILGSE*GIYWAGRALLFESW**VHRCLGKLCCED*WIYVDFAIYDRCFRVFLVERRIDYHAL*PNKL*ELGQVI*GFKRVFQDPN*R*DLCIAFCGQQSSKERQG*HHGSESTTIAIGRR  12540

Range 2: 12056 to 12538 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
369.5 bits(800) 0.0 160/161(99%) 0/161(0%) Plus/Plus
Query        9  GSRI*G*KKIF*NPP*IQIRF*MDKYIYVTGILNPNEARDEVFSVVNKGYIGPGGRSFSNRGSKYTVVWENSAARISGFTSTSQSTIDAFAYFLLKGGLTTTLSNPINCENWVRSSKDLSAFFRTLIKGKIYASRSVDSNLPKKDRDDIMEASRRLSPSDA  491
                GSRI*G*KKIF*NPP*IQIRF*MDKYIYVTGILNPNEARDEVFSVVNK YIGPGGRSFSNRGSKYTVVWENSAARISGFTSTSQSTIDAFAYFLLKGGLTTTLSNPINCENWVRSSKDLSAFFRTLIKGKIYASRSVDSNLPKKDRDDIMEASRRLSPSDA
Subject  12056  GSRI*G*KKIF*NPP*IQIRF*MDKYIYVTGILNPNEARDEVFSVVNKEYIGPGGRSFSNRGSKYTVVWENSAARISGFTSTSQSTIDAFAYFLLKGGLTTTLSNPINCENWVRSSKDLSAFFRTLIKGKIYASRSVDSNLPKKDRDDIMEASRRLSPSDA  12538

Range 3: 12055 to 12537 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
327.8 bits(709) 0.0 159/161(99%) 0/161(0%) Minus/Minus
Query        8  ASDGDXXXXXXXXXXXXXFGRLLSTERDA*ILPLIRVLKNALKSLDDLTQFSQFIGLESVVVNPPFNKKYAKASIVDCEVDVNPLILAAEFSQTTVYLLPRFEKERPPGPIYPLFTTENTSSLASLGFNIPVT*IYLSIQNRICIYGGFQKIFFYP*IREP  490
                ASDGDSRRLASMMSSLSFFGRLLSTERDA*ILPLIRVLKNALKSLDDLTQFSQFIGLESVVVNPPFNKKYAKASIVDCEVDVNPLILAAEFSQTTVYLLPRFEKERPPGPIY LFTTENTSSLASLGFNIPVT*IYLSIQNRICIYGGF KIFFYP*IREP
Subject  12055  ASDGDSRRLASMMSSLSFFGRLLSTERDA*ILPLIRVLKNALKSLDDLTQFSQFIGLESVVVNPPFNKKYAKASIVDCEVDVNPLILAAEFSQTTVYLLPRFEKERPPGPIYSLFTTENTSSLASLGFNIPVT*IYLSIQNRICIYGGF*KIFFYP*IREP  12537

Range 4: 12192 to 12536 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
265.5 bits(573) 0.0 114/115(99%) 0/115(0%) Minus/Minus
Query      145  RPMAIVVDSLP*CHPCLSLEDCCPQNAMHKSYL*LGS*KTRLNP*MT*PNSHSLLG*RAW*SIRLSTRNTRKHLS*IAKST*IH*SSQQSFPRQRCTYYHDSKRSALPVQYIPYS  489
                RPMAIVVDSLP*CHPCLSLEDCCPQNAMHKSYL*LGS*KTRLNP*MT*PNSHSLLG*RAW*SIRLSTRNTRKHLS*IAKST*IH*SSQQSFPRQRCTYYHDSKRSALP QYIPYS
Subject  12192  RPMAIVVDSLP*CHPCLSLEDCCPQNAMHKSYL*LGS*KTRLNP*MT*PNSHSLLG*RAW*SIRLSTRNTRKHLS*IAKST*IH*SSQQSFPRQRCTYYHDSKRSALPAQYIPYS  12536

Range 5: 12048 to 12149 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.0 bits(166) 0.0 33/34(97%) 0/34(0%) Minus/Minus
Query        1  SPLHKYIYPFKIVSVSTADFKKFSSILKSENPKS  102
                SPLHKYIYPFKIVSVSTADFKKFSSILKSENP S
Subject  12048  SPLHKYIYPFKIVSVSTADFKKFSSILKSENPLS  12149

Range 6: 12329 to 12538 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
167.9 bits(360) 0.0 70/70(100%) 0/70(0%) Minus/Minus
Query      282  GVRWR*SSTRFHDVIPVFLWKIAVHRTRCINLTFN*GPEKRA*ILR*PDPILTVYWVRERGSQSAFQQEI  491
                GVRWR*SSTRFHDVIPVFLWKIAVHRTRCINLTFN*GPEKRA*ILR*PDPILTVYWVRERGSQSAFQQEI
Subject  12329  GVRWR*SSTRFHDVIPVFLWKIAVHRTRCINLTFN*GPEKRA*ILR*PDPILTVYWVRERGSQSAFQQEI  12538

Range 7: 12053 to 12274 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
166.0 bits(356) 0.0 71/74(96%) 0/74(0%) Minus/Minus
Query        6  SRVFPDNGVLTTTIRKGAPSRSNISLIHYREYLVSSLVRV*YPRYINIFIHSKSYLYLRRISKNFLLSLNPRTP  227
                SRVFPDNGVLTTTIRKGAPSR NI LIHYREYLVSSLVRV*YPRYINIFIHSKSYLYLRRI KNFLLSLNPRTP
Subject  12053  SRVFPDNGVLTTTIRKGAPSRPNIFLIHYREYLVSSLVRV*YPRYINIFIHSKSYLYLRRILKNFLLSLNPRTP  12274

Range 8: 12330 to 12539 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
164.2 bits(352) 0.0 70/70(100%) 0/70(0%) Plus/Plus
Query      283  ISC*KAD*LPRSLTQ*TVRIGSGHLRI*ARFSGP*LKVRFMHRVLWTAIFQRKTGMTSWKRVDDYRHRTP  492
                ISC*KAD*LPRSLTQ*TVRIGSGHLRI*ARFSGP*LKVRFMHRVLWTAIFQRKTGMTSWKRVDDYRHRTP
Subject  12330  ISC*KAD*LPRSLTQ*TVRIGSGHLRI*ARFSGP*LKVRFMHRVLWTAIFQRKTGMTSWKRVDDYRHRTP  12539

Range 9: 12114 to 12269 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.9 bits(240) 0.0 50/52(96%) 0/52(0%) Plus/Plus
Query       67  DFEWINIFM*RGY*TLTRLETRYSR**IRDILDREGAPFRIVVVSTPLSGKT  222
                DFEWINIFM*RGY*TLTRLETRYSR**IR+IL REGAPFRIVVVSTPLSGKT
Subject  12114  DFEWINIFM*RGY*TLTRLETRYSR**IRNILGREGAPFRIVVVSTPLSGKT  12269

Grapevine leafroll associated virus 3, complete genome

Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 9

Range 1: 11661 to 12146 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
372.7 bits(807) 0.0 160/162(99%) 0/162(0%) Plus/Plus
Query        8  GFSDLRIEENFLKSAVDTDTILNG*IYLCNGDIKP*RG*RRGILGSE*GIYWTGRALLFESW**VHRCLGKLCCED*WIYVDFAIYDRCFRVFLVERRIDYHAL*PNKL*ELGQVI*GFKRVFQDPN*R*DLCIAFCGQQSSKERQG*HHGSESTTIAIGRQ  493
                GFSDLRIEENFLKSAVDTDTILNG*IYLCNGDIKP*RG*RRGILGSE*GIYWTGRALLFESW**VHR LGKLCCED*WIYVDFAIYDRCFRVFLVERRIDYHAL*PNKL*ELGQVI*GFKRVFQDPN*R*DLCIAFCGQQSSKERQG*HHGSESTTIAIGR+
Subject  11661  GFSDLRIEENFLKSAVDTDTILNG*IYLCNGDIKP*RG*RRGILGSE*GIYWTGRALLFESW**VHRRLGKLCCED*WIYVDFAIYDRCFRVFLVERRIDYHAL*PNKL*ELGQVI*GFKRVFQDPN*R*DLCIAFCGQQSSKERQG*HHGSESTTIAIGRR  12146

Range 2: 11662 to 12144 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
370.8 bits(803) 0.0 160/161(99%) 0/161(0%) Plus/Plus
Query        9  GSRI*G*KKIF*NPP*IQIRF*MDKYIYVTGILNPNEARDEVFSVVNKGYIGPGGRSFSNRGSKYTVVWENSAARISGFTSTSQSTIDAFAYFLLKGGLTTTLSNPINCENWVRSSKDLSAFFRTLIKGKIYASRSVDSNLPKKDRDDIMEASRRLSPSDA  491
                GSRI*G*KKIF*NPP*IQ RF*MDKYIYVTGILNPNEARDEVFSVVNKGYIGPGGRSFSNRGSKYTVVWENSAARISGFTSTSQSTIDAFAYFLLKGGLTTTLSNPINCENWVRSSKDLSAFFRTLIKGKIYASRSVDSNLPKKDRDDIMEASRRLSPSDA
Subject  11662  GSRI*G*KKIF*NPP*IQTRF*MDKYIYVTGILNPNEARDEVFSVVNKGYIGPGGRSFSNRGSKYTVVWENSAARISGFTSTSQSTIDAFAYFLLKGGLTTTLSNPINCENWVRSSKDLSAFFRTLIKGKIYASRSVDSNLPKKDRDDIMEASRRLSPSDA  12144

Range 3: 11661 to 12143 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
331.0 bits(716) 0.0 159/161(99%) 0/161(0%) Minus/Minus
Query        8  ASDGDXXXXXXXXXXXXXFGRLLSTERDA*ILPLIRVLKNALKSLDDLTQFSQFIGLESVVVNPPFNKKYAKASIVDCEVDVNPLILAAEFSQTTVYLLPRFEKERPPGPIYPLFTTENTSSLASLGFNIPVT*IYLSIQNRICIYGGFQKIFFYP*IREP  490
                ASDGDSRRLASMMSSLSFFGRLLSTERDA*ILPLIRVLKNALKSLDDLTQFSQFIGLESVVVNPPFNKKYAKASIVDCEVDVNPLILAAEFSQTTVYLLPRFEKERPPGPIYPLFTTENTSSLASLGFNIPVT*IYLSIQNR+CIYGGF KIFFYP*IREP
Subject  11661  ASDGDSRRLASMMSSLSFFGRLLSTERDA*ILPLIRVLKNALKSLDDLTQFSQFIGLESVVVNPPFNKKYAKASIVDCEVDVNPLILAAEFSQTTVYLLPRFEKERPPGPIYPLFTTENTSSLASLGFNIPVT*IYLSIQNRVCIYGGF*KIFFYP*IREP  12143

Range 4: 11798 to 12142 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
265.5 bits(573) 0.0 114/115(99%) 0/115(0%) Minus/Minus
Query      145  RPMAIVVDSLP*CHPCLSLEDCCPQNAMHKSYL*LGS*KTRLNP*MT*PNSHSLLG*RAW*SIRLSTRNTRKHLS*IAKST*IH*SSQQSFPRQRCTYYHDSKRSALPVQYIPYS  489
                RPMAIVVDSLP*CHPCLSLEDCCPQNAMHKSYL*LGS*KTRLNP*MT*PNSHSLLG*RAW*SIRLSTRNTRKHLS*IAKST*IH*SSQQSFPR+RCTYYHDSKRSALPVQYIPYS
Subject  11798  RPMAIVVDSLP*CHPCLSLEDCCPQNAMHKSYL*LGS*KTRLNP*MT*PNSHSLLG*RAW*SIRLSTRNTRKHLS*IAKST*IH*SSQQSFPRRRCTYYHDSKRSALPVQYIPYS  12142

Range 5: 11654 to 11755 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.0 bits(166) 0.0 33/34(97%) 0/34(0%) Minus/Minus
Query        1  SPLHKYIYPFKIVSVSTADFKKFSSILKSENPKS  102
                SPLHKYIYPFKIVSVSTADFKKFSSILKSENP S
Subject  11654  SPLHKYIYPFKIVSVSTADFKKFSSILKSENPLS  11755

Range 6: 11935 to 12144 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
167.9 bits(360) 0.0 70/70(100%) 0/70(0%) Minus/Minus
Query      282  GVRWR*SSTRFHDVIPVFLWKIAVHRTRCINLTFN*GPEKRA*ILR*PDPILTVYWVRERGSQSAFQQEI  491
                GVRWR*SSTRFHDVIPVFLWKIAVHRTRCINLTFN*GPEKRA*ILR*PDPILTVYWVRERGSQSAFQQEI
Subject  11935  GVRWR*SSTRFHDVIPVFLWKIAVHRTRCINLTFN*GPEKRA*ILR*PDPILTVYWVRERGSQSAFQQEI  12144

Range 7: 11659 to 11880 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
164.6 bits(353) 0.0 71/74(96%) 0/74(0%) Minus/Minus
Query        6  SRVFPDNGVLTTTIRKGAPSRSNISLIHYREYLVSSLVRV*YPRYINIFIHSKSYLYLRRISKNFLLSLNPRTP  227
                SRVFPD+GVLTTTIRKGAPSRSNISLIHYREYLVSSLVRV*YPRYINIFIHSKS LYLRRI KNFLLSLNPRTP
Subject  11659  SRVFPDDGVLTTTIRKGAPSRSNISLIHYREYLVSSLVRV*YPRYINIFIHSKSCLYLRRILKNFLLSLNPRTP  11880

Range 8: 11936 to 12145 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
164.2 bits(352) 0.0 70/70(100%) 0/70(0%) Plus/Plus
Query      283  ISC*KAD*LPRSLTQ*TVRIGSGHLRI*ARFSGP*LKVRFMHRVLWTAIFQRKTGMTSWKRVDDYRHRTP  492
                ISC*KAD*LPRSLTQ*TVRIGSGHLRI*ARFSGP*LKVRFMHRVLWTAIFQRKTGMTSWKRVDDYRHRTP
Subject  11936  ISC*KAD*LPRSLTQ*TVRIGSGHLRI*ARFSGP*LKVRFMHRVLWTAIFQRKTGMTSWKRVDDYRHRTP  12145

Range 9: 11720 to 11875 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
115.6 bits(246) 0.0 51/52(98%) 0/52(0%) Plus/Plus
Query       67  DFEWINIFM*RGY*TLTRLETRYSR**IRDILDREGAPFRIVVVSTPLSGKT  222
                DFEWINIFM*RGY*TLTRLETRYSR**IRDILDREGAPFRIVVVSTP SGKT
Subject  11720  DFEWINIFM*RGY*TLTRLETRYSR**IRDILDREGAPFRIVVVSTPSSGKT  11875

Nucleotide Sequence (106 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
106

Descriptions

Alignments

Grapevine leafroll associated virus 3 partial mRNA for RNA dependent RNA polymerase (RdRp gene), isolate TU 16

Sequence ID: AJ748527.1 Length: 653 Number of Matches: 4

Range 1: 487 to 591 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.5 bits(176) 0.0 35/35(100%) 0/35(0%) Plus/Minus
Query        2  SEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT  106
                SEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT
Subject    487  SEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT  591

Range 2: 489 to 590 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.5 bits(165) 0.0 34/34(100%) 0/34(0%) Minus/Plus
Query        3  SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVL  104
                SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVL
Subject    489  SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVL  590

Range 3: 488 to 592 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.0 bits(153) 0.0 35/35(100%) 0/35(0%) Minus/Plus
Query        1  VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSE  105
                VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSE
Subject    488  VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSE  592

Range 4: 489 to 590 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.3 bits(99) 0.0 34/34(100%) 0/34(0%) Plus/Minus
Query        3  QNRRINI*RLPTKYEAXXXXXXXXXXXXSPKYYG  104
                QNRRINI*RLPTKYEAIITTNYNITII*SPKYYG
Subject    489  QNRRINI*RLPTKYEAIITTNYNITII*SPKYYG  590

Grapevine leafroll associated virus 3 partial mRNA for RNA dependent RNA polymerase (RdRp gene), isolate AA 10

Sequence ID: AJ748528.1 Length: 653 Number of Matches: 4

Range 1: 487 to 591 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.5 bits(176) 0.0 35/35(100%) 0/35(0%) Plus/Minus
Query        2  SEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT  106
                SEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT
Subject    487  SEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT  591

Range 2: 489 to 590 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.5 bits(165) 0.0 34/34(100%) 0/34(0%) Minus/Plus
Query        3  SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVL  104
                SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVL
Subject    489  SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVL  590

Range 3: 488 to 592 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.0 bits(153) 0.0 35/35(100%) 0/35(0%) Minus/Plus
Query        1  VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSE  105
                VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSE
Subject    488  VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSE  592

Range 4: 489 to 590 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.3 bits(99) 0.0 34/34(100%) 0/34(0%) Plus/Minus
Query        3  QNRRINI*RLPTKYEAXXXXXXXXXXXXSPKYYG  104
                QNRRINI*RLPTKYEAIITTNYNITII*SPKYYG
Subject    489  QNRRINI*RLPTKYEAIITTNYNITII*SPKYYG  590

Grapevine leafroll associated virus 3 partial mRNA for RNA dependent RNA polymerase (RdRp gene), isolate FR 1

Sequence ID: AJ748529.1 Length: 653 Number of Matches: 4

Range 1: 487 to 591 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.5 bits(176) 0.0 35/35(100%) 0/35(0%) Plus/Minus
Query        2  SEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT  106
                SEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT
Subject    487  SEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT  591

Range 2: 489 to 590 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.5 bits(165) 0.0 34/34(100%) 0/34(0%) Minus/Plus
Query        3  SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVL  104
                SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVL
Subject    489  SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVL  590

Range 3: 488 to 592 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.0 bits(153) 0.0 35/35(100%) 0/35(0%) Minus/Plus
Query        1  VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSE  105
                VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSE
Subject    488  VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSE  592

Range 4: 489 to 590 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.3 bits(99) 0.0 34/34(100%) 0/34(0%) Plus/Minus
Query        3  QNRRINI*RLPTKYEAXXXXXXXXXXXXSPKYYG  104
                QNRRINI*RLPTKYEAIITTNYNITII*SPKYYG
Subject    489  QNRRINI*RLPTKYEAIITTNYNITII*SPKYYG  590

Grapevine leafroll associated virus 3 partial mRNA for RNA dependent RNA polymerase (RdRp gene), isolate C 6 1

Sequence ID: AJ748533.1 Length: 653 Number of Matches: 4

Range 1: 487 to 591 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.5 bits(176) 0.0 35/35(100%) 0/35(0%) Plus/Minus
Query        2  SEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT  106
                SEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT
Subject    487  SEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT  591

Range 2: 489 to 590 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.5 bits(165) 0.0 34/34(100%) 0/34(0%) Minus/Plus
Query        3  SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVL  104
                SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVL
Subject    489  SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVL  590

Range 3: 488 to 592 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.0 bits(153) 0.0 35/35(100%) 0/35(0%) Minus/Plus
Query        1  VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSE  105
                VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSE
Subject    488  VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSE  592

Range 4: 489 to 590 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.3 bits(99) 0.0 34/34(100%) 0/34(0%) Plus/Minus
Query        3  QNRRINI*RLPTKYEAXXXXXXXXXXXXSPKYYG  104
                QNRRINI*RLPTKYEAIITTNYNITII*SPKYYG
Subject    489  QNRRINI*RLPTKYEAIITTNYNITII*SPKYYG  590

Grapevine leafroll associated virus 3 isolate 3138 07, complete genome

Sequence ID: JX559645.1 Length: 18498 Number of Matches: 4

Range 1: 8489 to 8593 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.5 bits(176) 0.0 35/35(100%) 0/35(0%) Plus/Minus
Query        2  SEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT  106
                SEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT
Subject   8489  SEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT  8593

Range 2: 8491 to 8592 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.5 bits(165) 0.0 34/34(100%) 0/34(0%) Minus/Plus
Query        3  SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVL  104
                SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVL
Subject   8491  SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVL  8592

Range 3: 8490 to 8594 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.0 bits(153) 0.0 35/35(100%) 0/35(0%) Minus/Plus
Query        1  VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSE  105
                VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSE
Subject   8490  VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSE  8594

Range 4: 8491 to 8592 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.3 bits(99) 0.0 34/34(100%) 0/34(0%) Plus/Minus
Query        3  QNRRINI*RLPTKYEAXXXXXXXXXXXXSPKYYG  104
                QNRRINI*RLPTKYEAIITTNYNITII*SPKYYG
Subject   8491  QNRRINI*RLPTKYEAIITTNYNITII*SPKYYG  8592

Nucleotide Sequence (345 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
35
70
105
140
175
210
245
280
315
345

Descriptions

Alignments

Grapevine leafroll associated virus 3 ORF7 gene for divergent coat protein, isolate K2

Sequence ID: LN851187.1 Length: 1434 Number of Matches: 7

Range 1: 273 to 611 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
255.4 bits(551) 0.0 111/113(98%) 0/113(0%) Plus/Minus
Query        3  DLISITFSFGLEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTEVCAAPPTISTCNTYDDSFQLFDE*FLPVVISTPLPPMYFLQKTTSRPKYGLL*HTPHSK*SP  341
                DLISITFSF LEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTEVCA PPTISTCNTYDDSFQLFDE*FLPVVISTPLPPMYFLQKTTSRPKYGLL*HTPHSK*SP
Subject    273  DLISITFSFELEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTEVCAVPPTISTCNTYDDSFQLFDE*FLPVVISTPLPPMYFLQKTTSRPKYGLL*HTPHSK*SP  611

Range 2: 274 to 612 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
235.2 bits(507) 0.0 109/113(96%) 0/113(0%) Minus/Plus
Query        2  GDYFECGVCHNKPYLGREVVFCRKYIGGRGVEITTGKXXXXXXXXXXXYVLHVDIVGGAAQTSVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSSPKLNVMLIRS  340
                GDYFECGVCHNKPYLGREVVFC+KYIGGRGVEITTGKNYSSNNWNESSYVL VDIVGG AQTSVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSS KLNVMLIRS
Subject    274  GDYFECGVCHNKPYLGREVVFCKKYIGGRGVEITTGKNYSSNNWNESSYVLQVDIVGGTAQTSVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSSSKLNVMLIRS  612

Range 3: 274 to 612 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
220.5 bits(475) 0.0 109/113(96%) 0/113(0%) Plus/Minus
Query        2  *PYKHYIQFRA*ETTRVEVLIYGHYLRYLVDTRPVFG*TTNVRLRISRIN*GLCRPTDYIHM*YXXXXXXXXXXXXXTSGDLHSSPTYVFPTEDDFPS*VRFVMTHAALEVIS  340
                *PYKHY+QFRA*ETTRVEVLIYGHYLRYLVDTRPVFG*TTNVRLRISRIN*GLC PTDYIH+*YVRRLVPVVRRVVLTSGDLHSSPTYVF TEDDFPS*VRFVMTHAALEVIS
Subject    274  *PYKHYVQFRA*ETTRVEVLIYGHYLRYLVDTRPVFG*TTNVRLRISRIN*GLCXPTDYIHL*YVRRLVPVVRRVVLTSGDLHSSPTYVFLTEDDFPS*VRFVMTHAALEVIS  612

Range 4: 269 to 613 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
219.6 bits(473) 0.0 110/115(96%) 0/115(0%) Plus/Minus
Query        1  VTL*ALHSVSGLRNNQGRGSDLRTLSSLSCRYASSFWVDH*RPFAYK*N*LRSVPPHRLYPHVIXXXXXXXXXXXXXYQW*SPLLSHLCISYRRRLPVLSTVCYDTRRTRSNLPR  345
                VTL*AL SVS LRNNQGRGSDLRTLSSLSCRYASSFWVDH*RPFAYK*N*LRSV  HRLYP VIRTTTRSSCSTSSSYQW*SPLLSHLCISYRRRLPVLSTVCYDTRRTRSNLPR
Subject    269  VTL*ALRSVSSLRNNQGRGSDLRTLSSLSCRYASSFWVDH*RPFAYK*N*LRSVXSHRLYPLVIRTTTRSSCSTSSSYQW*SPLLSHLCISYRRRLPVLSTVCYDTRRTRSNLPR  613

Range 5: 269 to 613 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
207.3 bits(446) 0.0 110/115(96%) 0/115(0%) Minus/Plus
Query        1  TREITSSAACVITNRT*DGKSSSVGNT*VGEEWRSPLVXXXXXXXXXXXXTYYMWI*SVGRHRPQLILLIRKRTLVVYPKTGRVSTR*RR*CP*IRTSTLVVSQARN*M*CL*GH  345
                T EITSSAACVITNRT*DGKSSSV NT*VGEEWRSPLVRTTRRTTGTSRRTYY WI*SVG HRPQLILLIRKRTLVVYPKTGRVSTR*RR*CP*IRTSTLVVSQARN* *CL*GH
Subject    269  TGEITSSAACVITNRT*DGKSSSVRNT*VGEEWRSPLVRTTRRTTGTSRRTYYKWI*SVGXHRPQLILLIRKRTLVVYPKTGRVSTR*RR*CP*IRTSTLVVSQARN*T*CL*GH  613

Range 6: 423 to 611 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
139.4 bits(298) 0.0 58/63(92%) 0/63(0%) Minus/Plus
Query        3  ITCGYSRWGGTDLS*FYLYANGR*WSTQKLDAYLQDNEDSVRRSEPLPWLFLKPETECNAYKV  191
                IT GYSRW  TDLS*FYLYANGR*WSTQKLDAYLQDNEDSVRRSEPLPWLFLK ETE NAYKV
Subject    423  ITSGYSRWDXTDLS*FYLYANGR*WSTQKLDAYLQDNEDSVRRSEPLPWLFLKLETERNAYKV  611

Range 7: 321 to 380 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.6 bits(115) 0.0 20/20(100%) 0/20(0%) Minus/Plus
Query      234  TGSRLL*EIHRWERSGDHHW  293
                TGSRLL*EIHRWERSGDHHW
Subject    321  TGSRLL*EIHRWERSGDHHW  380

Grapevine leafroll associated virus 3 isolate GP18, complete genome

Sequence ID: EU259806.1 Length: 18498 Number of Matches: 7

Range 1: 15124 to 15462 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
255.4 bits(551) 0.0 111/113(98%) 0/113(0%) Plus/Minus
Query        3  DLISITFSFGLEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTEVCAAPPTISTCNTYDDSFQLFDE*FLPVVISTPLPPMYFLQKTTSRPKYGLL*HTPHSK*SP  341
                DLISITFSF LEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTEVCA PPTISTCNTYDDSFQLFDE*FLPVVISTPLPPMYFLQKTTSRPKYGLL*HTPHSK*SP
Subject  15124  DLISITFSFELEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTEVCAVPPTISTCNTYDDSFQLFDE*FLPVVISTPLPPMYFLQKTTSRPKYGLL*HTPHSK*SP  15462

Range 2: 15125 to 15463 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
238.9 bits(515) 0.0 110/113(97%) 0/113(0%) Minus/Plus
Query        2  GDYFECGVCHNKPYLGREVVFCRKYIGGRGVEITTGKXXXXXXXXXXXYVLHVDIVGGAAQTSVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSSPKLNVMLIRS  340
                GDYFECGVCHNKPYLGREVVFC+KYIGGRGVEITTGKNYSSNNWNESSYVLHVDIVGG AQTSVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSS KLNVMLIRS
Subject  15125  GDYFECGVCHNKPYLGREVVFCKKYIGGRGVEITTGKNYSSNNWNESSYVLHVDIVGGTAQTSVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSSSKLNVMLIRS  15463

Range 3: 15120 to 15464 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
232.0 bits(500) 0.0 113/115(98%) 0/115(0%) Plus/Minus
Query        1  VTL*ALHSVSGLRNNQGRGSDLRTLSSLSCRYASSFWVDH*RPFAYK*N*LRSVPPHRLYPHVIXXXXXXXXXXXXXYQW*SPLLSHLCISYRRRLPVLSTVCYDTRRTRSNLPR  345
                VTL*ALHSVS LRNNQGRGSDLRTLSSLSCRYASSFWVDH*RPFAYK*N*LRSVP HRLYPHVIRTTTRSSCSTSSSYQW*SPLLSHLCISYRRRLPVLSTVCYDTRRTRSNLPR
Subject  15120  VTL*ALHSVSSLRNNQGRGSDLRTLSSLSCRYASSFWVDH*RPFAYK*N*LRSVPSHRLYPHVIRTTTRSSCSTSSSYQW*SPLLSHLCISYRRRLPVLSTVCYDTRRTRSNLPR  15464

Range 4: 15125 to 15463 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
225.1 bits(485) 0.0 112/113(99%) 0/113(0%) Plus/Minus
Query        2  *PYKHYIQFRA*ETTRVEVLIYGHYLRYLVDTRPVFG*TTNVRLRISRIN*GLCRPTDYIHM*YXXXXXXXXXXXXXTSGDLHSSPTYVFPTEDDFPS*VRFVMTHAALEVIS  340
                *PYKHYIQFRA*ETTRVEVLIYGHYLRYLVDTRPVFG*TTNVRLRISRIN*GLCRPTDYIHM*YVRRLVPVVRRVVLTSGDLHSSPTYVF TEDDFPS*VRFVMTHAALEVIS
Subject  15125  *PYKHYIQFRA*ETTRVEVLIYGHYLRYLVDTRPVFG*TTNVRLRISRIN*GLCRPTDYIHM*YVRRLVPVVRRVVLTSGDLHSSPTYVFLTEDDFPS*VRFVMTHAALEVIS  15463

Range 5: 15120 to 15464 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
215.5 bits(464) 0.0 113/115(98%) 0/115(0%) Minus/Plus
Query        1  TREITSSAACVITNRT*DGKSSSVGNT*VGEEWRSPLVXXXXXXXXXXXXTYYMWI*SVGRHRPQLILLIRKRTLVVYPKTGRVSTR*RR*CP*IRTSTLVVSQARN*M*CL*GH  345
                T EITSSAACVITNRT*DGKSSSV NT*VGEEWRSPLVRTTRRTTGTSRRTYYMWI*SVGRHRPQLILLIRKRTLVVYPKTGRVSTR*RR*CP*IRTSTLVVSQARN*M*CL*GH
Subject  15120  TGEITSSAACVITNRT*DGKSSSVRNT*VGEEWRSPLVRTTRRTTGTSRRTYYMWI*SVGRHRPQLILLIRKRTLVVYPKTGRVSTR*RR*CP*IRTSTLVVSQARN*M*CL*GH  15464

Range 6: 15274 to 15462 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
152.7 bits(327) 0.0 61/63(97%) 0/63(0%) Minus/Plus
Query        3  ITCGYSRWGGTDLS*FYLYANGR*WSTQKLDAYLQDNEDSVRRSEPLPWLFLKPETECNAYKV  191
                ITCGYSRW GTDLS*FYLYANGR*WSTQKLDAYLQDNEDSVRRSEPLPWLFLK ETECNAYKV
Subject  15274  ITCGYSRWDGTDLS*FYLYANGR*WSTQKLDAYLQDNEDSVRRSEPLPWLFLKLETECNAYKV  15462

Range 7: 15172 to 15231 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.6 bits(115) 0.0 20/20(100%) 0/20(0%) Minus/Plus
Query      234  TGSRLL*EIHRWERSGDHHW  293
                TGSRLL*EIHRWERSGDHHW
Subject  15172  TGSRLL*EIHRWERSGDHHW  15231

Grapevine leafroll associated virus 3 isolate TC BR, complete genome

Sequence ID: KX756668.1 Length: 18498 Number of Matches: 7

Range 1: 15124 to 15462 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
255.4 bits(551) 0.0 111/113(98%) 0/113(0%) Plus/Minus
Query        3  DLISITFSFGLEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTEVCAAPPTISTCNTYDDSFQLFDE*FLPVVISTPLPPMYFLQKTTSRPKYGLL*HTPHSK*SP  341
                DLISITFSF LEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTEVCA PPTISTCNTYDDSFQLFDE*FLPVVISTPLPPMYFLQKTTSRPKYGLL*HTPHSK*SP
Subject  15124  DLISITFSFELEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTEVCAVPPTISTCNTYDDSFQLFDE*FLPVVISTPLPPMYFLQKTTSRPKYGLL*HTPHSK*SP  15462

Range 2: 15125 to 15463 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
238.9 bits(515) 0.0 110/113(97%) 0/113(0%) Minus/Plus
Query        2  GDYFECGVCHNKPYLGREVVFCRKYIGGRGVEITTGKXXXXXXXXXXXYVLHVDIVGGAAQTSVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSSPKLNVMLIRS  340
                GDYFECGVCHNKPYLGREVVFC+KYIGGRGVEITTGKNYSSNNWNESSYVLHVDIVGG AQTSVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSS KLNVMLIRS
Subject  15125  GDYFECGVCHNKPYLGREVVFCKKYIGGRGVEITTGKNYSSNNWNESSYVLHVDIVGGTAQTSVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSSSKLNVMLIRS  15463

Range 3: 15120 to 15464 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
228.3 bits(492) 0.0 112/115(97%) 0/115(0%) Plus/Minus
Query        1  VTL*ALHSVSGLRNNQGRGSDLRTLSSLSCRYASSFWVDH*RPFAYK*N*LRSVPPHRLYPHVIXXXXXXXXXXXXXYQW*SPLLSHLCISYRRRLPVLSTVCYDTRRTRSNLPR  345
                VTL*AL SVS LRNNQGRGSDLRTLSSLSCRYASSFWVDH*RPFAYK*N*LRSVP HRLYPHVIRTTTRSSCSTSSSYQW*SPLLSHLCISYRRRLPVLSTVCYDTRRTRSNLPR
Subject  15120  VTL*ALRSVSSLRNNQGRGSDLRTLSSLSCRYASSFWVDH*RPFAYK*N*LRSVPSHRLYPHVIRTTTRSSCSTSSSYQW*SPLLSHLCISYRRRLPVLSTVCYDTRRTRSNLPR  15464

Range 4: 15125 to 15463 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
224.7 bits(484) 0.0 111/113(98%) 0/113(0%) Plus/Minus
Query        2  *PYKHYIQFRA*ETTRVEVLIYGHYLRYLVDTRPVFG*TTNVRLRISRIN*GLCRPTDYIHM*YXXXXXXXXXXXXXTSGDLHSSPTYVFPTEDDFPS*VRFVMTHAALEVIS  340
                *PYKHY+QFRA*ETTRVEVLIYGHYLRYLVDTRPVFG*TTNVRLRISRIN*GLCRPTDYIHM*YVRRLVPVVRRVVLTSGDLHSSPTYVF TEDDFPS*VRFVMTHAALEVIS
Subject  15125  *PYKHYVQFRA*ETTRVEVLIYGHYLRYLVDTRPVFG*TTNVRLRISRIN*GLCRPTDYIHM*YVRRLVPVVRRVVLTSGDLHSSPTYVFLTEDDFPS*VRFVMTHAALEVIS  15463

Range 5: 15120 to 15464 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
212.8 bits(458) 0.0 112/115(97%) 0/115(0%) Minus/Plus
Query        1  TREITSSAACVITNRT*DGKSSSVGNT*VGEEWRSPLVXXXXXXXXXXXXTYYMWI*SVGRHRPQLILLIRKRTLVVYPKTGRVSTR*RR*CP*IRTSTLVVSQARN*M*CL*GH  345
                T EITSSAACVITNRT*DGKSSSV NT*VGEEWRSPLVRTTRRTTGTSRRTYYMWI*SVGRHRPQLILLIRKRTLVVYPKTGRVSTR*RR*CP*IRTSTLVVSQARN* *CL*GH
Subject  15120  TGEITSSAACVITNRT*DGKSSSVRNT*VGEEWRSPLVRTTRRTTGTSRRTYYMWI*SVGRHRPQLILLIRKRTLVVYPKTGRVSTR*RR*CP*IRTSTLVVSQARN*T*CL*GH  15464

Range 6: 15274 to 15462 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
147.2 bits(315) 0.0 60/63(95%) 0/63(0%) Minus/Plus
Query        3  ITCGYSRWGGTDLS*FYLYANGR*WSTQKLDAYLQDNEDSVRRSEPLPWLFLKPETECNAYKV  191
                ITCGYSRW GTDLS*FYLYANGR*WSTQKLDAYLQDNEDSVRRSEPLPWLFLK ETE NAYKV
Subject  15274  ITCGYSRWDGTDLS*FYLYANGR*WSTQKLDAYLQDNEDSVRRSEPLPWLFLKLETERNAYKV  15462

Range 7: 15172 to 15231 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.6 bits(115) 0.0 20/20(100%) 0/20(0%) Minus/Plus
Query      234  TGSRLL*EIHRWERSGDHHW  293
                TGSRLL*EIHRWERSGDHHW
Subject  15172  TGSRLL*EIHRWERSGDHHW  15231

Grapevine leafroll associated virus 3 isolate 3 3 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130283.1 Length: 4711 Number of Matches: 7

Range 1: 1393 to 1731 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
252.6 bits(545) 0.0 110/113(97%) 0/113(0%) Plus/Minus
Query        3  DLISITFSFGLEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTEVCAAPPTISTCNTYDDSFQLFDE*FLPVVISTPLPPMYFLQKTTSRPKYGLL*HTPHSK*SP  341
                DLISITFSF LEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTEVCA PPTI TCNTYDDSFQLFDE*FLPVVISTPLPPMYFLQKTTSRPKYGLL*HTPHSK*SP
Subject   1393  DLISITFSFELEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTEVCAVPPTIFTCNTYDDSFQLFDE*FLPVVISTPLPPMYFLQKTTSRPKYGLL*HTPHSK*SP  1731

Range 2: 1394 to 1732 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
236.6 bits(510) 0.0 109/113(96%) 0/113(0%) Minus/Plus
Query        2  GDYFECGVCHNKPYLGREVVFCRKYIGGRGVEITTGKXXXXXXXXXXXYVLHVDIVGGAAQTSVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSSPKLNVMLIRS  340
                GDYFECGVCHNKPYLGREVVFC+KYIGGRGVEITTGKNYSSNNWNESSYVLHV+IVGG AQTSVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSS KLNVMLIRS
Subject   1394  GDYFECGVCHNKPYLGREVVFCKKYIGGRGVEITTGKNYSSNNWNESSYVLHVNIVGGTAQTSVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSSSKLNVMLIRS  1732

Range 3: 1389 to 1733 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
226.0 bits(487) 0.0 111/115(97%) 0/115(0%) Plus/Minus
Query        1  VTL*ALHSVSGLRNNQGRGSDLRTLSSLSCRYASSFWVDH*RPFAYK*N*LRSVPPHRLYPHVIXXXXXXXXXXXXXYQW*SPLLSHLCISYRRRLPVLSTVCYDTRRTRSNLPR  345
                VTL*ALHSVS LRNNQGRGSDLRTLSSLSCRYASSFWVDH*RPFAYK*N*LRSVP HRLY HVIRTTTRSSCSTSSSYQW*SPLLSHLCISYRRRLPVLSTVCYDT RTRSNLPR
Subject   1389  VTL*ALHSVSSLRNNQGRGSDLRTLSSLSCRYASSFWVDH*RPFAYK*N*LRSVPSHRLYSHVIRTTTRSSCSTSSSYQW*SPLLSHLCISYRRRLPVLSTVCYDTHRTRSNLPR  1733

Range 4: 1394 to 1732 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
223.3 bits(481) 0.0 111/113(98%) 0/113(0%) Plus/Minus
Query        2  *PYKHYIQFRA*ETTRVEVLIYGHYLRYLVDTRPVFG*TTNVRLRISRIN*GLCRPTDYIHM*YXXXXXXXXXXXXXTSGDLHSSPTYVFPTEDDFPS*VRFVMTHAALEVIS  340
                *PYKHYIQFRA*ETTRVEVLIYGHYLRYLVDTRPVFG*TTNVRLRISRIN*GLCRPTDYIHM*YVRRLVPVVRRVVLTSGDLHSSPTYVF TEDDFPS*VRFVMTH ALEVIS
Subject   1394  *PYKHYIQFRA*ETTRVEVLIYGHYLRYLVDTRPVFG*TTNVRLRISRIN*GLCRPTDYIHM*YVRRLVPVVRRVVLTSGDLHSSPTYVFLTEDDFPS*VRFVMTHTALEVIS  1732

Range 5: 1389 to 1733 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
206.8 bits(445) 0.0 111/115(97%) 0/115(0%) Minus/Plus
Query        1  TREITSSAACVITNRT*DGKSSSVGNT*VGEEWRSPLVXXXXXXXXXXXXTYYMWI*SVGRHRPQLILLIRKRTLVVYPKTGRVSTR*RR*CP*IRTSTLVVSQARN*M*CL*GH  345
                T EITSSA CVITNRT*DGKSSSV NT*VGEEWRSPLVRTTRRTTGTSRRTYYM I*SVGRHRPQLILLIRKRTLVVYPKTGRVSTR*RR*CP*IRTSTLVVSQARN*M*CL*GH
Subject   1389  TGEITSSAVCVITNRT*DGKSSSVRNT*VGEEWRSPLVRTTRRTTGTSRRTYYM*I*SVGRHRPQLILLIRKRTLVVYPKTGRVSTR*RR*CP*IRTSTLVVSQARN*M*CL*GH  1733

Range 6: 1543 to 1731 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
149.1 bits(319) 0.0 60/63(95%) 0/63(0%) Minus/Plus
Query        3  ITCGYSRWGGTDLS*FYLYANGR*WSTQKLDAYLQDNEDSVRRSEPLPWLFLKPETECNAYKV  191
                ITC YSRW GTDLS*FYLYANGR*WSTQKLDAYLQDNEDSVRRSEPLPWLFLK ETECNAYKV
Subject   1543  ITCEYSRWDGTDLS*FYLYANGR*WSTQKLDAYLQDNEDSVRRSEPLPWLFLKLETECNAYKV  1731

Range 7: 1441 to 1500 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.6 bits(115) 0.0 20/20(100%) 0/20(0%) Minus/Plus
Query      234  TGSRLL*EIHRWERSGDHHW  293
                TGSRLL*EIHRWERSGDHHW
Subject   1441  TGSRLL*EIHRWERSGDHHW  1500

Grapevine leafroll associated virus 3 isolate 3 7 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds

Sequence ID: HQ130285.1 Length: 4711 Number of Matches: 7

Range 1: 1393 to 1731 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
252.6 bits(545) 0.0 110/113(97%) 0/113(0%) Plus/Minus
Query        3  DLISITFSFGLEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTEVCAAPPTISTCNTYDDSFQLFDE*FLPVVISTPLPPMYFLQKTTSRPKYGLL*HTPHSK*SP  341
                DLISITFSF LEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTEVCA PPTI TCNTYDDSFQLFDE*FLPVVISTPLPPMYFLQKTTSRPKYGLL*HTPHSK*SP
Subject   1393  DLISITFSFELEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTEVCAVPPTIFTCNTYDDSFQLFDE*FLPVVISTPLPPMYFLQKTTSRPKYGLL*HTPHSK*SP  1731

Range 2: 1394 to 1732 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
236.6 bits(510) 0.0 109/113(96%) 0/113(0%) Minus/Plus
Query        2  GDYFECGVCHNKPYLGREVVFCRKYIGGRGVEITTGKXXXXXXXXXXXYVLHVDIVGGAAQTSVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSSPKLNVMLIRS  340
                GDYFECGVCHNKPYLGREVVFC+KYIGGRGVEITTGKNYSSNNWNESSYVLHV+IVGG AQTSVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSS KLNVMLIRS
Subject   1394  GDYFECGVCHNKPYLGREVVFCKKYIGGRGVEITTGKNYSSNNWNESSYVLHVNIVGGTAQTSVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSSSKLNVMLIRS  1732

Range 3: 1389 to 1733 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
226.0 bits(487) 0.0 111/115(97%) 0/115(0%) Plus/Minus
Query        1  VTL*ALHSVSGLRNNQGRGSDLRTLSSLSCRYASSFWVDH*RPFAYK*N*LRSVPPHRLYPHVIXXXXXXXXXXXXXYQW*SPLLSHLCISYRRRLPVLSTVCYDTRRTRSNLPR  345
                VTL*ALHSVS LRNNQGRGSDLRTLSSLSCRYASSFWVDH*RPFAYK*N*LRSVP HRLY HVIRTTTRSSCSTSSSYQW*SPLLSHLCISYRRRLPVLSTVCYDT RTRSNLPR
Subject   1389  VTL*ALHSVSSLRNNQGRGSDLRTLSSLSCRYASSFWVDH*RPFAYK*N*LRSVPSHRLYSHVIRTTTRSSCSTSSSYQW*SPLLSHLCISYRRRLPVLSTVCYDTHRTRSNLPR  1733

Range 4: 1394 to 1732 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
223.3 bits(481) 0.0 111/113(98%) 0/113(0%) Plus/Minus
Query        2  *PYKHYIQFRA*ETTRVEVLIYGHYLRYLVDTRPVFG*TTNVRLRISRIN*GLCRPTDYIHM*YXXXXXXXXXXXXXTSGDLHSSPTYVFPTEDDFPS*VRFVMTHAALEVIS  340
                *PYKHYIQFRA*ETTRVEVLIYGHYLRYLVDTRPVFG*TTNVRLRISRIN*GLCRPTDYIHM*YVRRLVPVVRRVVLTSGDLHSSPTYVF TEDDFPS*VRFVMTH ALEVIS
Subject   1394  *PYKHYIQFRA*ETTRVEVLIYGHYLRYLVDTRPVFG*TTNVRLRISRIN*GLCRPTDYIHM*YVRRLVPVVRRVVLTSGDLHSSPTYVFLTEDDFPS*VRFVMTHTALEVIS  1732

Range 5: 1389 to 1733 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
206.8 bits(445) 0.0 111/115(97%) 0/115(0%) Minus/Plus
Query        1  TREITSSAACVITNRT*DGKSSSVGNT*VGEEWRSPLVXXXXXXXXXXXXTYYMWI*SVGRHRPQLILLIRKRTLVVYPKTGRVSTR*RR*CP*IRTSTLVVSQARN*M*CL*GH  345
                T EITSSA CVITNRT*DGKSSSV NT*VGEEWRSPLVRTTRRTTGTSRRTYYM I*SVGRHRPQLILLIRKRTLVVYPKTGRVSTR*RR*CP*IRTSTLVVSQARN*M*CL*GH
Subject   1389  TGEITSSAVCVITNRT*DGKSSSVRNT*VGEEWRSPLVRTTRRTTGTSRRTYYM*I*SVGRHRPQLILLIRKRTLVVYPKTGRVSTR*RR*CP*IRTSTLVVSQARN*M*CL*GH  1733

Range 6: 1543 to 1731 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
149.1 bits(319) 0.0 60/63(95%) 0/63(0%) Minus/Plus
Query        3  ITCGYSRWGGTDLS*FYLYANGR*WSTQKLDAYLQDNEDSVRRSEPLPWLFLKPETECNAYKV  191
                ITC YSRW GTDLS*FYLYANGR*WSTQKLDAYLQDNEDSVRRSEPLPWLFLK ETECNAYKV
Subject   1543  ITCEYSRWDGTDLS*FYLYANGR*WSTQKLDAYLQDNEDSVRRSEPLPWLFLKLETECNAYKV  1731

Range 7: 1441 to 1500 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.6 bits(115) 0.0 20/20(100%) 0/20(0%) Minus/Plus
Query      234  TGSRLL*EIHRWERSGDHHW  293
                TGSRLL*EIHRWERSGDHHW
Subject   1441  TGSRLL*EIHRWERSGDHHW  1500

Nucleotide Sequence (673 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
68
136
204
272
340
408
476
544
612
673

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
482.2 2761.4 34% 3.027e-134 79% KX756669.1
479.9 2753.7 34% 1.481e-133 79% GQ352631.1
479.0 2725.1 34% 2.796e-133 79% JX559645.1
479.0 2755.5 34% 2.796e-133 79% EU344893.1
472.1 2733.5 34% 3.278e-131 79% GU983863.1

Alignments

Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome

Sequence ID: KX756669.1 Length: 18313 Number of Matches: 14

Range 1: 8892 to 9509 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
482.2 bits(1046) 0.0 204/206(99%) 0/206(0%) Plus/Plus
Query        1  VFLCLGSS*G*YRRVVVLISVIYFFVFS*ACHP*G*YRWHSFLKWVLKTQFFNLCVLFVLFTP*G*DRWNMYSRGFFFKSRVTLPTLVGAYMWEFELPYLTDKRHISYSAPSVATFSLVSR*DRGQQVTNSLHLRCAGSVGFGLSVPNILLGDVQESSLVCLWGMTGATRFRTVAAM*VVHAALCVRRACIWASALGQRRSGD*QP  618
                VFLCLGSS*G*YRRVVVLISVIYFFVFS*ACHP* *YRWHSFLKWVLKT+FFNLCVLFVLFTP*G*DRWNMYSRGFFFKSRVTLPTLVGAYMWEFELPYLTDKRHISYSAPSVATFSLVSR*DRGQQVTNSLHLRCAGSVGFGLSVPNILLGDVQESSLVCLWGMTGATRFRTVAAM*VVHAALCVRRACIWASALGQRRSGD*QP
Subject   8892  VFLCLGSS*G*YRRVVVLISVIYFFVFS*ACHP*S*YRWHSFLKWVLKTKFFNLCVLFVLFTP*G*DRWNMYSRGFFFKSRVTLPTLVGAYMWEFELPYLTDKRHISYSAPSVATFSLVSR*DRGQQVTNSLHLRCAGSVGFGLSVPNILLGDVQESSLVCLWGMTGATRFRTVAAM*VVHAALCVRRACIWASALGQRRSGD*QP  9509

Range 2: 8978 to 9547 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
461.6 bits(1001) 0.0 188/190(99%) 0/190(0%) Minus/Minus
Query       87  YLQDLALSALRRAGC*SPDRRCPRALAQMHARLTHNAACTTYIAATVLNLVAPVIPQRHTKLDSCTSPKRIFGTLRPNPTLPAHLKCRLLVTCWPLSYLDTRLKVATLGAL*LMCLLSVRYGSSNSHMYAPTRVGRVTRDLKKNPLLYMFHRSYPHGVNKTKSTHKLKNWVFNTHFKKECHRY*PHGWHA  656
                YLQDLALSALRRAGC*SPDRRCPRALAQMHARLTHNAACTTYIAATVLNLVAPVIPQRHTKLDSCTSPKRIFGTLRPNPTLPAHLKCRLLVTCWPLSYLDTRLKVATLGAL*LMCLLSVRYGSSNSHMYAPTRVGRVTRDLKKNPLLYMFHRSYPHGVNKTKSTHKLKN VFNTHFKKECHRY* HGWHA
Subject   8978  YLQDLALSALRRAGC*SPDRRCPRALAQMHARLTHNAACTTYIAATVLNLVAPVIPQRHTKLDSCTSPKRIFGTLRPNPTLPAHLKCRLLVTCWPLSYLDTRLKVATLGAL*LMCLLSVRYGSSNSHMYAPTRVGRVTRDLKKNPLLYMFHRSYPHGVNKTKSTHKLKNLVFNTHFKKECHRY*LHGWHA  9547

Range 3: 8893 to 8934 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.3 bits(75) 0.0 14/14(100%) 0/14(0%) Minus/Minus
Query        2  PFGINLTKNRGTET  43
                PFGINLTKNRGTET
Subject   8893  PFGINLTKNRGTET  8934

Range 4: 8892 to 9374 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
373.6 bits(809) 0.0 159/161(99%) 0/161(0%) Minus/Minus
Query        1  TH*TRLLYIA*KDIWHTKTKSNTSSAP*VQAVGHLLAPILPRHKAKSRDTWRAIADVSLVRKIREFKLPHVRSDKSRKGNPRLKEKPSTVHVPPVLSSRCEQNKKYTQIKKLGL*YPLQEGVPPVLTSRMARLREDEKINN*DKYDDPSVLTSRRTEAQKH  483
                TH*TRLLYIA*KDIWHTKTKSNTSSAP*VQAVGHLLAPILPRHKAKSRDTWRAIADVSLVRKIREF+LPHVRSDKSRKGNPRLKEKPSTVHVPPVLSSRCEQNKKYTQIKK GL*YPLQEGVPPVLTSRMARLREDEKINN*DKYDDPSVLTSRRTEAQKH
Subject   8892  TH*TRLLYIA*KDIWHTKTKSNTSSAP*VQAVGHLLAPILPRHKAKSRDTWRAIADVSLVRKIREFELPHVRSDKSRKGNPRLKEKPSTVHVPPVLSSRCEQNKKYTQIKKFGL*YPLQEGVPPVLTSRMARLREDEKINN*DKYDDPSVLTSRRTEAQKH  9374

Range 5: 9418 to 9546 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
104.6 bits(222) 0.0 43/43(100%) 0/43(0%) Minus/Minus
Query      527  TFRT*HFQRSVEPAASHLTDAALGHSPKCMHVLRTMPHARLT*  655
                TFRT*HFQRSVEPAASHLTDAALGHSPKCMHVLRTMPHARLT*
Subject   9418  TFRT*HFQRSVEPAASHLTDAALGHSPKCMHVLRTMPHARLT*  9546

Range 6: 8893 to 9378 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
332.8 bits(720) 0.0 161/162(99%) 0/162(0%) Plus/Plus
Query        2  CFCASVLREVNTEGSSYLSQLFIFSSSLRRAIREVNTGGTPS*SGY*RPNFLICVYFLFCSHREDKTGGTCTVEXXXXXXXXXXXXXXERTCGSLNSRILRTRDTSAIARQVSRLLALCRGRIGANR*PTACT*GALEVLDLVLVCQISF*AMYRSLV*CVF  487
                CFCASVLREVNTEGSSYLSQLFIFSSSLRRAIREVNTGGTPS*SGY*RPNFLICVYFLFCSHREDKTGGTCTVEGFSLSLGLPFLLLSERTCGS NSRILRTRDTSAIARQVSRLLALCRGRIGANR*PTACT*GALEVLDLVLVCQISF*AMYRSLV*CVF
Subject   8893  CFCASVLREVNTEGSSYLSQLFIFSSSLRRAIREVNTGGTPS*SGY*RPNFLICVYFLFCSHREDKTGGTCTVEGFSLSLGLPFLLLSERTCGSSNSRILRTRDTSAIARQVSRLLALCRGRIGANR*PTACT*GALEVLDLVLVCQISF*AMYRSLV*CVF  9378

Range 7: 9410 to 9547 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
110.1 bits(234) 0.0 46/46(100%) 0/46(0%) Plus/Plus
Query      519  CSCYVSRACGIVRKTCMHLGECPRAASVR*LAAGSTER*KC*VLKV  656
                CSCYVSRACGIVRKTCMHLGECPRAASVR*LAAGSTER*KC*VLKV
Subject   9410  CSCYVSRACGIVRKTCMHLGECPRAASVR*LAAGSTER*KC*VLKV  9547

Range 8: 9083 to 9355 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
223.3 bits(481) 0.0 90/91(99%) 0/91(0%) Plus/Plus
Query      192  RIRPVEHVQ*RVFL*VSGYPSYSCRSVHVGV*TPVSYGQETHQL*RAKCRDF*PCVEVG*GPTGDQQPALKVRWKCWIWS*CAKYPFRRCT  464
                RIRPVEHVQ*RVFL*VSGYPSYSCRSVHVGV TPVSYGQETHQL*RAKCRDF*PCVEVG*GPTGDQQPALKVRWKCWIWS*CAKYPFRRCT
Subject   9083  RIRPVEHVQ*RVFL*VSGYPSYSCRSVHVGVRTPVSYGQETHQL*RAKCRDF*PCVEVG*GPTGDQQPALKVRWKCWIWS*CAKYPFRRCT  9355

Range 9: 8894 to 9043 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
111.0 bits(236) 0.0 48/50(96%) 0/50(0%) Plus/Plus
Query        3  VSVPRFFVRLIPKGRRTYLSYLFFRLLLGVPSVRLIPVALLLEVGIKDPI  152
                VSVPRFFVRLIPKGRRTYLSYLFFRLLLGVPSV+LIPVALLLEVGIKD I
Subject   8894  VSVPRFFVRLIPKGRRTYLSYLFFRLLLGVPSVKLIPVALLLEVGIKDQI  9043

Range 10: 9421 to 9549 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
105.5 bits(224) 0.0 43/43(100%) 0/43(0%) Plus/Plus
Query      530  CKSCMRHCA*DVHAFGRVP*GSVGQVTSSRLYGALKVLGPEGT  658
                CKSCMRHCA*DVHAFGRVP*GSVGQVTSSRLYGALKVLGPEGT
Subject   9421  CKSCMRHCA*DVHAFGRVP*GSVGQVTSSRLYGALKVLGPEGT  9549

Range 11: 8977 to 9378 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
308.5 bits(667) 0.0 131/134(98%) 0/134(0%) Minus/Minus
Query       86  KDTLN*TPVHRLKGYLAH*DQIQHFQRTLSAGCWSPVGPYPTSTQG*KSRHLARYS*CVSCP*DTGVQTPTCTLRQE*EG*PET*RKTLYCTCSTGLILTV*TKQKVHTN*KIGSLIPTSRRSATGINLTDGTP  487
                KDTLN*TPVHRLKGYLAH*DQIQHFQRTLSAGCWSPVGPYPTSTQG*KSRHLARYS*CVSCP*DTGV+TPTCTLRQE*EG*PET*RKTLYCTCSTGLILTV*TKQKVHTN*KI SLIPTSRRSATGIN TDGTP
Subject   8977  KDTLN*TPVHRLKGYLAH*DQIQHFQRTLSAGCWSPVGPYPTSTQG*KSRHLARYS*CVSCP*DTGVRTPTCTLRQE*EG*PET*RKTLYCTCSTGLILTV*TKQKVHTN*KIWSLIPTSRRSATGINFTDGTP  9378

Range 12: 9423 to 9464 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.0 bits(81) 0.0 14/14(100%) 0/14(0%) Minus/Minus
Query      532  NACTSYAQCRMHDL  573
                NACTSYAQCRMHDL
Subject   9423  NACTSYAQCRMHDL  9464

Range 13: 8894 to 8932 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.3 bits(73) 0.0 13/13(100%) 0/13(0%) Minus/Minus
Query        3  LRY*PHEEPRHRN  41
                LRY*PHEEPRHRN
Subject   8894  LRY*PHEEPRHRN  8932

Range 14: 9507 to 9563 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.5 bits(69) 0.0 15/19(79%) 0/19(0%) Minus/Minus
Query      616  CWVCLVPSGPSTFSAP*SR  672
                C    VPSGPSTFSAP*SR
Subject   9507  CLSPTVPSGPSTFSAP*SR  9563

Grapevine leafroll associated virus 3 isolate 621, complete genome

Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 14

Range 1: 9077 to 9694 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
479.9 bits(1041) 0.0 202/206(98%) 0/206(0%) Plus/Plus
Query        1  VFLCLGSS*G*YRRVVVLISVIYFFVFS*ACHP*G*YRWHSFLKWVLKTQFFNLCVLFVLFTP*G*DRWNMYSRGFFFKSRVTLPTLVGAYMWEFELPYLTDKRHISYSAPSVATFSLVSR*DRGQQVTNSLHLRCAGSVGFGLSVPNILLGDVQESSLVCLWGMTGATRFRTVAAM*VVHAALCVRRACIWASALGQRRSGD*QP  618
                VFLCLGSS*G*YRRVVVLISVIYFFVFS*ACHP* *YRWHSFLKWVLKT+FFNLC+LFVLFTP*G*DRWNMYSRGFFFKSRVTLPTLVGAYMWEFELPYLTDKRHISYSAPSVATFSLVSR*DRGQQVTNSLHLRCAGSVGFGLSVPNILLGDVQESSLVCLWGMTGATRFRTVAAM*VVHAALCVRRACIWA ALGQRRSGD*QP
Subject   9077  VFLCLGSS*G*YRRVVVLISVIYFFVFS*ACHP*S*YRWHSFLKWVLKTKFFNLCILFVLFTP*G*DRWNMYSRGFFFKSRVTLPTLVGAYMWEFELPYLTDKRHISYSAPSVATFSLVSR*DRGQQVTNSLHLRCAGSVGFGLSVPNILLGDVQESSLVCLWGMTGATRFRTVAAM*VVHAALCVRRACIWAGALGQRRSGD*QP  9694

Range 2: 9163 to 9732 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
455.6 bits(988) 0.0 186/190(98%) 0/190(0%) Minus/Minus
Query       87  YLQDLALSALRRAGC*SPDRRCPRALAQMHARLTHNAACTTYIAATVLNLVAPVIPQRHTKLDSCTSPKRIFGTLRPNPTLPAHLKCRLLVTCWPLSYLDTRLKVATLGAL*LMCLLSVRYGSSNSHMYAPTRVGRVTRDLKKNPLLYMFHRSYPHGVNKTKSTHKLKNWVFNTHFKKECHRY*PHGWHA  656
                YLQDLALSALRRAGC*SPDRRCPRA AQMHARLTHNAACTTYIAATVLNLVAPVIPQRHTKLDSCTSPKRIFGTLRPNPTLPAHLKCRLLVTCWPLSYLDTRLKVATLGAL*LMCLLSVRYGSSNSHMYAPTRVGRVTRDLKKNPLLYMFHRSYPHGVNKTKS HKLKN VFNTHFKKECHRY* HGWHA
Subject   9163  YLQDLALSALRRAGC*SPDRRCPRAPAQMHARLTHNAACTTYIAATVLNLVAPVIPQRHTKLDSCTSPKRIFGTLRPNPTLPAHLKCRLLVTCWPLSYLDTRLKVATLGAL*LMCLLSVRYGSSNSHMYAPTRVGRVTRDLKKNPLLYMFHRSYPHGVNKTKSIHKLKNLVFNTHFKKECHRY*LHGWHA  9732

Range 3: 9078 to 9119 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.3 bits(75) 0.0 14/14(100%) 0/14(0%) Minus/Minus
Query        2  PFGINLTKNRGTET  43
                PFGINLTKNRGTET
Subject   9078  PFGINLTKNRGTET  9119

Range 4: 9077 to 9559 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
375.4 bits(813) 0.0 160/161(99%) 0/161(0%) Minus/Minus
Query        1  TH*TRLLYIA*KDIWHTKTKSNTSSAP*VQAVGHLLAPILPRHKAKSRDTWRAIADVSLVRKIREFKLPHVRSDKSRKGNPRLKEKPSTVHVPPVLSSRCEQNKKYTQIKKLGL*YPLQEGVPPVLTSRMARLREDEKINN*DKYDDPSVLTSRRTEAQKH  483
                TH*TRLLYIA*KDIWHTKTKSNTSSAP*VQAVGHLLAPILPRHKAKSRDTWRAIADVSLVRKIREFKLPHVRSDKSRKGNPRLKEKPSTVHVPPVLSSRCEQNKKYTQIKK GL*YPLQEGVPPVLTSRMARLREDEKINN*DKYDDPSVLTSRRTEAQKH
Subject   9077  TH*TRLLYIA*KDIWHTKTKSNTSSAP*VQAVGHLLAPILPRHKAKSRDTWRAIADVSLVRKIREFKLPHVRSDKSRKGNPRLKEKPSTVHVPPVLSSRCEQNKKYTQIKKFGL*YPLQEGVPPVLTSRMARLREDEKINN*DKYDDPSVLTSRRTEAQKH  9559

Range 5: 9603 to 9731 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
102.3 bits(217) 0.0 42/43(98%) 0/43(0%) Minus/Minus
Query      527  TFRT*HFQRSVEPAASHLTDAALGHSPKCMHVLRTMPHARLT*  655
                TFRT*HFQRSVEPAASHLTDAALGH PKCMHVLRTMPHARLT*
Subject   9603  TFRT*HFQRSVEPAASHLTDAALGHPPKCMHVLRTMPHARLT*  9731

Range 6: 9078 to 9563 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
335.6 bits(726) 0.0 162/162(100%) 0/162(0%) Plus/Plus
Query        2  CFCASVLREVNTEGSSYLSQLFIFSSSLRRAIREVNTGGTPS*SGY*RPNFLICVYFLFCSHREDKTGGTCTVEXXXXXXXXXXXXXXERTCGSLNSRILRTRDTSAIARQVSRLLALCRGRIGANR*PTACT*GALEVLDLVLVCQISF*AMYRSLV*CVF  487
                CFCASVLREVNTEGSSYLSQLFIFSSSLRRAIREVNTGGTPS*SGY*RPNFLICVYFLFCSHREDKTGGTCTVEGFSLSLGLPFLLLSERTCGSLNSRILRTRDTSAIARQVSRLLALCRGRIGANR*PTACT*GALEVLDLVLVCQISF*AMYRSLV*CVF
Subject   9078  CFCASVLREVNTEGSSYLSQLFIFSSSLRRAIREVNTGGTPS*SGY*RPNFLICVYFLFCSHREDKTGGTCTVEGFSLSLGLPFLLLSERTCGSLNSRILRTRDTSAIARQVSRLLALCRGRIGANR*PTACT*GALEVLDLVLVCQISF*AMYRSLV*CVF  9563

Range 7: 9595 to 9732 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.9 bits(227) 0.0 45/46(98%) 0/46(0%) Plus/Plus
Query      519  CSCYVSRACGIVRKTCMHLGECPRAASVR*LAAGSTER*KC*VLKV  656
                CSCYVSRACGIVRKTCMHLG CPRAASVR*LAAGSTER*KC*VLKV
Subject   9595  CSCYVSRACGIVRKTCMHLGGCPRAASVR*LAAGSTER*KC*VLKV  9732

Range 8: 9268 to 9540 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
225.6 bits(486) 0.0 91/91(100%) 0/91(0%) Plus/Plus
Query      192  RIRPVEHVQ*RVFL*VSGYPSYSCRSVHVGV*TPVSYGQETHQL*RAKCRDF*PCVEVG*GPTGDQQPALKVRWKCWIWS*CAKYPFRRCT  464
                RIRPVEHVQ*RVFL*VSGYPSYSCRSVHVGV*TPVSYGQETHQL*RAKCRDF*PCVEVG*GPTGDQQPALKVRWKCWIWS*CAKYPFRRCT
Subject   9268  RIRPVEHVQ*RVFL*VSGYPSYSCRSVHVGV*TPVSYGQETHQL*RAKCRDF*PCVEVG*GPTGDQQPALKVRWKCWIWS*CAKYPFRRCT  9540

Range 9: 9079 to 9228 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
111.0 bits(236) 0.0 48/50(96%) 0/50(0%) Plus/Plus
Query        3  VSVPRFFVRLIPKGRRTYLSYLFFRLLLGVPSVRLIPVALLLEVGIKDPI  152
                VSVPRFFVRLIPKGRRTYLSYLFFRLLLGVPSV+LIPVALLLEVGIKD I
Subject   9079  VSVPRFFVRLIPKGRRTYLSYLFFRLLLGVPSVKLIPVALLLEVGIKDQI  9228

Range 10: 9606 to 9734 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
105.5 bits(224) 0.0 43/43(100%) 0/43(0%) Plus/Plus
Query      530  CKSCMRHCA*DVHAFGRVP*GSVGQVTSSRLYGALKVLGPEGT  658
                CKSCMRHCA*DVHAFGRVP*GSVGQVTSSRLYGALKVLGPEGT
Subject   9606  CKSCMRHCA*DVHAFGRVP*GSVGQVTSSRLYGALKVLGPEGT  9734

Range 11: 9162 to 9563 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
307.6 bits(665) 0.0 131/134(98%) 0/134(0%) Minus/Minus
Query       86  KDTLN*TPVHRLKGYLAH*DQIQHFQRTLSAGCWSPVGPYPTSTQG*KSRHLARYS*CVSCP*DTGVQTPTCTLRQE*EG*PET*RKTLYCTCSTGLILTV*TKQKVHTN*KIGSLIPTSRRSATGINLTDGTP  487
                KDTLN*TPVHRLKGYLAH*DQIQHFQRTLSAGCWSPVGPYPTSTQG*KSRHLARYS*CVSCP*DTGVQTPTCTLRQE*EG*PET*RKTLYCTCSTGLILTV*TKQKV+TN*KI SLIPTSRRSATGIN TDGTP
Subject   9162  KDTLN*TPVHRLKGYLAH*DQIQHFQRTLSAGCWSPVGPYPTSTQG*KSRHLARYS*CVSCP*DTGVQTPTCTLRQE*EG*PET*RKTLYCTCSTGLILTV*TKQKVYTN*KIWSLIPTSRRSATGINFTDGTP  9563

Range 12: 9608 to 9649 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.0 bits(81) 0.0 14/14(100%) 0/14(0%) Minus/Minus
Query      532  NACTSYAQCRMHDL  573
                NACTSYAQCRMHDL
Subject   9608  NACTSYAQCRMHDL  9649

Range 13: 9079 to 9117 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.3 bits(73) 0.0 13/13(100%) 0/13(0%) Minus/Minus
Query        3  LRY*PHEEPRHRN  41
                LRY*PHEEPRHRN
Subject   9079  LRY*PHEEPRHRN  9117

Range 14: 9692 to 9748 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.5 bits(69) 0.0 15/19(79%) 0/19(0%) Minus/Minus
Query      616  CWVCLVPSGPSTFSAP*SR  672
                C    VPSGPSTFSAP*SR
Subject   9692  CLSPTVPSGPSTFSAP*SR  9748

Grapevine leafroll associated virus 3 isolate 3138 07, complete genome

Sequence ID: JX559645.1 Length: 18498 Number of Matches: 13

Range 1: 9077 to 9694 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
479.0 bits(1039) 0.0 203/206(99%) 0/206(0%) Plus/Plus
Query        1  VFLCLGSS*G*YRRVVVLISVIYFFVFS*ACHP*G*YRWHSFLKWVLKTQFFNLCVLFVLFTP*G*DRWNMYSRGFFFKSRVTLPTLVGAYMWEFELPYLTDKRHISYSAPSVATFSLVSR*DRGQQVTNSLHLRCAGSVGFGLSVPNILLGDVQESSLVCLWGMTGATRFRTVAAM*VVHAALCVRRACIWASALGQRRSGD*QP  618
                VFLCLGSS*G*YRRVVVLISVIYFFVFS*ACHP* *YRWHSFLKWVLKT F NLCVLFVLFTP*G*DRWNMYSRGFFFKSRVTLPTLVGAYMWEFELPYLTDKRHISYSAPSVATFSLVSR*DRGQQVTNSLHLRCAGSVGFGLSVPNILLGDVQESSLVCLWGMTGATRFRTVAAM*VVHAALCVRRACIWASALGQRRSGD*QP
Subject   9077  VFLCLGSS*G*YRRVVVLISVIYFFVFS*ACHP*S*YRWHSFLKWVLKTNFLNLCVLFVLFTP*G*DRWNMYSRGFFFKSRVTLPTLVGAYMWEFELPYLTDKRHISYSAPSVATFSLVSR*DRGQQVTNSLHLRCAGSVGFGLSVPNILLGDVQESSLVCLWGMTGATRFRTVAAM*VVHAALCVRRACIWASALGQRRSGD*QP  9694

Range 2: 9163 to 9732 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
457.0 bits(991) 0.0 186/190(98%) 0/190(0%) Minus/Minus
Query       87  YLQDLALSALRRAGC*SPDRRCPRALAQMHARLTHNAACTTYIAATVLNLVAPVIPQRHTKLDSCTSPKRIFGTLRPNPTLPAHLKCRLLVTCWPLSYLDTRLKVATLGAL*LMCLLSVRYGSSNSHMYAPTRVGRVTRDLKKNPLLYMFHRSYPHGVNKTKSTHKLKNWVFNTHFKKECHRY*PHGWHA  656
                YLQDLALSALRRAGC*SPDRRCPRALAQMHARLTHNAACTTYIAATVLNLVAPVIPQRHTKLDSCTSPKRIFGTLRPNPTLPAHLKCRLLVTCWPLSYLDTRLKVATLGAL*LMCLLSVRYGSSNSHMYAPTRVGRVTRDLKKNPLLYMFHRSYPHGVNKTKSTHK K  VFNTHFKKECHRY* HGWHA
Subject   9163  YLQDLALSALRRAGC*SPDRRCPRALAQMHARLTHNAACTTYIAATVLNLVAPVIPQRHTKLDSCTSPKRIFGTLRPNPTLPAHLKCRLLVTCWPLSYLDTRLKVATLGAL*LMCLLSVRYGSSNSHMYAPTRVGRVTRDLKKNPLLYMFHRSYPHGVNKTKSTHKFKKLVFNTHFKKECHRY*LHGWHA  9732

Range 3: 9078 to 9119 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.3 bits(75) 0.0 14/14(100%) 0/14(0%) Minus/Minus
Query        2  PFGINLTKNRGTET  43
                PFGINLTKNRGTET
Subject   9078  PFGINLTKNRGTET  9119

Range 4: 9077 to 9559 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
370.4 bits(802) 0.0 158/161(98%) 0/161(0%) Minus/Minus
Query        1  TH*TRLLYIA*KDIWHTKTKSNTSSAP*VQAVGHLLAPILPRHKAKSRDTWRAIADVSLVRKIREFKLPHVRSDKSRKGNPRLKEKPSTVHVPPVLSSRCEQNKKYTQIKKLGL*YPLQEGVPPVLTSRMARLREDEKINN*DKYDDPSVLTSRRTEAQKH  483
                TH*TRLLYI *KDIWHTKTKSNTSSAP*VQAVGHLLAPILPRHKAKSRDTWRAIADVSLVRKIREFKLPHVRSDKSRKGNPRLKEKPSTVHVPPVLSSRCEQNKKYTQI K+GL*YPLQEGVPPVLTSRMARLREDEKINN*DKYDDPSVLTSRRTEAQKH
Subject   9077  TH*TRLLYIT*KDIWHTKTKSNTSSAP*VQAVGHLLAPILPRHKAKSRDTWRAIADVSLVRKIREFKLPHVRSDKSRKGNPRLKEKPSTVHVPPVLSSRCEQNKKYTQI*KIGL*YPLQEGVPPVLTSRMARLREDEKINN*DKYDDPSVLTSRRTEAQKH  9559

Range 5: 9603 to 9731 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
104.6 bits(222) 0.0 43/43(100%) 0/43(0%) Minus/Minus
Query      527  TFRT*HFQRSVEPAASHLTDAALGHSPKCMHVLRTMPHARLT*  655
                TFRT*HFQRSVEPAASHLTDAALGHSPKCMHVLRTMPHARLT*
Subject   9603  TFRT*HFQRSVEPAASHLTDAALGHSPKCMHVLRTMPHARLT*  9731

Range 6: 9078 to 9563 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
325.9 bits(705) 0.0 159/162(98%) 0/162(0%) Plus/Plus
Query        2  CFCASVLREVNTEGSSYLSQLFIFSSSLRRAIREVNTGGTPS*SGY*RPNFLICVYFLFCSHREDKTGGTCTVEXXXXXXXXXXXXXXERTCGSLNSRILRTRDTSAIARQVSRLLALCRGRIGANR*PTACT*GALEVLDLVLVCQISF*AMYRSLV*CVF  487
                CFCASVLREVNTEGSSYLSQLFIFSSSLRRAIREVNTGGTPS*SGY*RP F ICVYFLFCSHREDKTGGTCTVEGFSLSLGLPFLLLSERTCGSLNSRILRTRDTSAIARQVSRLLALCRGRIGANR*PTACT*GALEVLDLVLVCQISF* MYRSLV*CVF
Subject   9078  CFCASVLREVNTEGSSYLSQLFIFSSSLRRAIREVNTGGTPS*SGY*RPIF*ICVYFLFCSHREDKTGGTCTVEGFSLSLGLPFLLLSERTCGSLNSRILRTRDTSAIARQVSRLLALCRGRIGANR*PTACT*GALEVLDLVLVCQISF*VMYRSLV*CVF  9563

Range 7: 9595 to 9732 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
110.1 bits(234) 0.0 46/46(100%) 0/46(0%) Plus/Plus
Query      519  CSCYVSRACGIVRKTCMHLGECPRAASVR*LAAGSTER*KC*VLKV  656
                CSCYVSRACGIVRKTCMHLGECPRAASVR*LAAGSTER*KC*VLKV
Subject   9595  CSCYVSRACGIVRKTCMHLGECPRAASVR*LAAGSTER*KC*VLKV  9732

Range 8: 9079 to 9540 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
321.8 bits(696) 0.0 149/154(97%) 0/154(0%) Plus/Plus
Query        3  VSVPRFFVRLIPKGRRTYLSYLFFRLLLGVPSVRLIPVALLLEVGIKDPIXXXXXXXXXXXXXRIRPVEHVQ*RVFL*VSGYPSYSCRSVHVGV*TPVSYGQETHQL*RAKCRDF*PCVEVG*GPTGDQQPALKVRWKCWIWS*CAKYPFRRCT  464
                VSVPRFFVRLIPKGRRTYLSYLFFRLLLGVPSV+LIPVALLLEVGIKD  F FVCTFCFVHTVRIRPVEHVQ*RVFL*VSGYPSYSCRSVHVGV*TPVSYGQETHQL*RAKCRDF*PCVEVG*GPTGDQQPALKVRWKCWIWS*CAKYPFR CT
Subject   9079  VSVPRFFVRLIPKGRRTYLSYLFFRLLLGVPSVKLIPVALLLEVGIKDQFFKFVCTFCFVHTVRIRPVEHVQ*RVFL*VSGYPSYSCRSVHVGV*TPVSYGQETHQL*RAKCRDF*PCVEVG*GPTGDQQPALKVRWKCWIWS*CAKYPFR*CT  9540

Range 9: 9606 to 9734 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
105.5 bits(224) 0.0 43/43(100%) 0/43(0%) Plus/Plus
Query      530  CKSCMRHCA*DVHAFGRVP*GSVGQVTSSRLYGALKVLGPEGT  658
                CKSCMRHCA*DVHAFGRVP*GSVGQVTSSRLYGALKVLGPEGT
Subject   9606  CKSCMRHCA*DVHAFGRVP*GSVGQVTSSRLYGALKVLGPEGT  9734

Range 10: 9162 to 9563 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
302.6 bits(654) 0.0 129/134(96%) 0/134(0%) Minus/Minus
Query       86  KDTLN*TPVHRLKGYLAH*DQIQHFQRTLSAGCWSPVGPYPTSTQG*KSRHLARYS*CVSCP*DTGVQTPTCTLRQE*EG*PET*RKTLYCTCSTGLILTV*TKQKVHTN*KIGSLIPTSRRSATGINLTDGTP  487
                KDTLN*TPVH LKGYLAH*DQIQHFQRTLSAGCWSPVGPYPTSTQG*KSRHLARYS*CVSCP*DTGVQTPTCTLRQE*EG*PET*RKTLYCTCSTGLILTV*TKQKVHTN K  SLIPTSRRSATGIN TDGTP
Subject   9162  KDTLN*TPVHHLKGYLAH*DQIQHFQRTLSAGCWSPVGPYPTSTQG*KSRHLARYS*CVSCP*DTGVQTPTCTLRQE*EG*PET*RKTLYCTCSTGLILTV*TKQKVHTNLKNWSLIPTSRRSATGINFTDGTP  9563

Range 11: 9608 to 9649 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.0 bits(81) 0.0 14/14(100%) 0/14(0%) Minus/Minus
Query      532  NACTSYAQCRMHDL  573
                NACTSYAQCRMHDL
Subject   9608  NACTSYAQCRMHDL  9649

Range 12: 9079 to 9117 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.3 bits(73) 0.0 13/13(100%) 0/13(0%) Minus/Minus
Query        3  LRY*PHEEPRHRN  41
                LRY*PHEEPRHRN
Subject   9079  LRY*PHEEPRHRN  9117

Range 13: 9692 to 9748 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.5 bits(69) 0.0 15/19(79%) 0/19(0%) Minus/Minus
Query      616  CWVCLVPSGPSTFSAP*SR  672
                C    VPSGPSTFSAP*SR
Subject   9692  CLSPTVPSGPSTFSAP*SR  9748

Grapevine leafroll associated virus 3 isolate Cl 766, complete genome

Sequence ID: EU344893.1 Length: 17919 Number of Matches: 14

Range 1: 8498 to 9115 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
479.0 bits(1039) 0.0 203/206(99%) 0/206(0%) Plus/Plus
Query        1  VFLCLGSS*G*YRRVVVLISVIYFFVFS*ACHP*G*YRWHSFLKWVLKTQFFNLCVLFVLFTP*G*DRWNMYSRGFFFKSRVTLPTLVGAYMWEFELPYLTDKRHISYSAPSVATFSLVSR*DRGQQVTNSLHLRCAGSVGFGLSVPNILLGDVQESSLVCLWGMTGATRFRTVAAM*VVHAALCVRRACIWASALGQRRSGD*QP  618
                VFLCLGSS*G*YRRVVVLISVIYFFVFS*ACHP* *YRWHSFLKWVLKT+FFNLCVLFVLFTP*G*DRWNMYSRGFFFKSRVTLPTLVGAYMWEFELPYLTDKRHISYSAPSVATFSLVSR*DRGQQVTNSLHLRCAGSVGFGLSVPNILLGDVQESSLVCLWGMTGATRFRTVAAM*VVHAALCV RACIWASALGQRRSGD*QP
Subject   8498  VFLCLGSS*G*YRRVVVLISVIYFFVFS*ACHP*S*YRWHSFLKWVLKTKFFNLCVLFVLFTP*G*DRWNMYSRGFFFKSRVTLPTLVGAYMWEFELPYLTDKRHISYSAPSVATFSLVSR*DRGQQVTNSLHLRCAGSVGFGLSVPNILLGDVQESSLVCLWGMTGATRFRTVAAM*VVHAALCVGRACIWASALGQRRSGD*QP  9115

Range 2: 8584 to 9153 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
457.0 bits(991) 0.0 186/190(98%) 0/190(0%) Minus/Minus
Query       87  YLQDLALSALRRAGC*SPDRRCPRALAQMHARLTHNAACTTYIAATVLNLVAPVIPQRHTKLDSCTSPKRIFGTLRPNPTLPAHLKCRLLVTCWPLSYLDTRLKVATLGAL*LMCLLSVRYGSSNSHMYAPTRVGRVTRDLKKNPLLYMFHRSYPHGVNKTKSTHKLKNWVFNTHFKKECHRY*PHGWHA  656
                YLQDLALSALRRAGC*SPDRRCPRALAQMHAR THNAACTTYIAATVLNLVAPVIPQRHTKLDSCTSP+RIFGTLRPNPTLPAHLKCRLLVTCWPLSYLDTRLKVATLGAL*LMCLLSVRYGSSNSHMYAPTRVGRVTRDLKKNPLLYMFHRSYPHGVNKTKSTHKLKN VFNTHFKKECHRY* HGWHA
Subject   8584  YLQDLALSALRRAGC*SPDRRCPRALAQMHARPTHNAACTTYIAATVLNLVAPVIPQRHTKLDSCTSPRRIFGTLRPNPTLPAHLKCRLLVTCWPLSYLDTRLKVATLGAL*LMCLLSVRYGSSNSHMYAPTRVGRVTRDLKKNPLLYMFHRSYPHGVNKTKSTHKLKNLVFNTHFKKECHRY*LHGWHA  9153

Range 3: 8499 to 8540 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.3 bits(75) 0.0 14/14(100%) 0/14(0%) Minus/Minus
Query        2  PFGINLTKNRGTET  43
                PFGINLTKNRGTET
Subject   8499  PFGINLTKNRGTET  8540

Range 4: 8498 to 8980 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
375.4 bits(813) 0.0 160/161(99%) 0/161(0%) Minus/Minus
Query        1  TH*TRLLYIA*KDIWHTKTKSNTSSAP*VQAVGHLLAPILPRHKAKSRDTWRAIADVSLVRKIREFKLPHVRSDKSRKGNPRLKEKPSTVHVPPVLSSRCEQNKKYTQIKKLGL*YPLQEGVPPVLTSRMARLREDEKINN*DKYDDPSVLTSRRTEAQKH  483
                TH*TRLLYIA*KDIWHTKTKSNTSSAP*VQAVGHLLAPILPRHKAKSRDTWRAIADVSLVRKIREFKLPHVRSDKSRKGNPRLKEKPSTVHVPPVLSSRCEQNKKYTQIKK GL*YPLQEGVPPVLTSRMARLREDEKINN*DKYDDPSVLTSRRTEAQKH
Subject   8498  TH*TRLLYIA*KDIWHTKTKSNTSSAP*VQAVGHLLAPILPRHKAKSRDTWRAIADVSLVRKIREFKLPHVRSDKSRKGNPRLKEKPSTVHVPPVLSSRCEQNKKYTQIKKFGL*YPLQEGVPPVLTSRMARLREDEKINN*DKYDDPSVLTSRRTEAQKH  8980

Range 5: 9024 to 9152 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
104.6 bits(222) 0.0 43/43(100%) 0/43(0%) Minus/Minus
Query      527  TFRT*HFQRSVEPAASHLTDAALGHSPKCMHVLRTMPHARLT*  655
                TFRT*HFQRSVEPAASHLTDAALGHSPKCMHVLRTMPHARLT*
Subject   9024  TFRT*HFQRSVEPAASHLTDAALGHSPKCMHVLRTMPHARLT*  9152

Range 6: 8499 to 8984 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
335.6 bits(726) 0.0 162/162(100%) 0/162(0%) Plus/Plus
Query        2  CFCASVLREVNTEGSSYLSQLFIFSSSLRRAIREVNTGGTPS*SGY*RPNFLICVYFLFCSHREDKTGGTCTVEXXXXXXXXXXXXXXERTCGSLNSRILRTRDTSAIARQVSRLLALCRGRIGANR*PTACT*GALEVLDLVLVCQISF*AMYRSLV*CVF  487
                CFCASVLREVNTEGSSYLSQLFIFSSSLRRAIREVNTGGTPS*SGY*RPNFLICVYFLFCSHREDKTGGTCTVEGFSLSLGLPFLLLSERTCGSLNSRILRTRDTSAIARQVSRLLALCRGRIGANR*PTACT*GALEVLDLVLVCQISF*AMYRSLV*CVF
Subject   8499  CFCASVLREVNTEGSSYLSQLFIFSSSLRRAIREVNTGGTPS*SGY*RPNFLICVYFLFCSHREDKTGGTCTVEGFSLSLGLPFLLLSERTCGSLNSRILRTRDTSAIARQVSRLLALCRGRIGANR*PTACT*GALEVLDLVLVCQISF*AMYRSLV*CVF  8984

Range 7: 9016 to 9153 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
108.7 bits(231) 0.0 45/46(98%) 0/46(0%) Plus/Plus
Query      519  CSCYVSRACGIVRKTCMHLGECPRAASVR*LAAGSTER*KC*VLKV  656
                CSCYVSRACGIVR+TCMHLGECPRAASVR*LAAGSTER*KC*VLKV
Subject   9016  CSCYVSRACGIVRRTCMHLGECPRAASVR*LAAGSTER*KC*VLKV  9153

Range 8: 8689 to 8961 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
221.9 bits(478) 0.0 90/91(99%) 0/91(0%) Plus/Plus
Query      192  RIRPVEHVQ*RVFL*VSGYPSYSCRSVHVGV*TPVSYGQETHQL*RAKCRDF*PCVEVG*GPTGDQQPALKVRWKCWIWS*CAKYPFRRCT  464
                RIRPVEHVQ*RVFL*VSGYPSYSCRSVHVGV*TPVSYGQETHQL*RAKCRDF*PCVEVG*GPTGDQQPALKVRWKCWIWS*CAKYP RRCT
Subject   8689  RIRPVEHVQ*RVFL*VSGYPSYSCRSVHVGV*TPVSYGQETHQL*RAKCRDF*PCVEVG*GPTGDQQPALKVRWKCWIWS*CAKYPSRRCT  8961

Range 9: 8500 to 8649 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
111.0 bits(236) 0.0 48/50(96%) 0/50(0%) Plus/Plus
Query        3  VSVPRFFVRLIPKGRRTYLSYLFFRLLLGVPSVRLIPVALLLEVGIKDPI  152
                VSVPRFFVRLIPKGRRTYLSYLFFRLLLGVPSV+LIPVALLLEVGIKD I
Subject   8500  VSVPRFFVRLIPKGRRTYLSYLFFRLLLGVPSVKLIPVALLLEVGIKDQI  8649

Range 10: 9027 to 9155 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
105.5 bits(224) 0.0 43/43(100%) 0/43(0%) Plus/Plus
Query      530  CKSCMRHCA*DVHAFGRVP*GSVGQVTSSRLYGALKVLGPEGT  658
                CKSCMRHCA*DVHAFGRVP*GSVGQVTSSRLYGALKVLGPEGT
Subject   9027  CKSCMRHCA*DVHAFGRVP*GSVGQVTSSRLYGALKVLGPEGT  9155

Range 11: 8583 to 8984 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
308.5 bits(667) 0.0 131/134(98%) 0/134(0%) Minus/Minus
Query       86  KDTLN*TPVHRLKGYLAH*DQIQHFQRTLSAGCWSPVGPYPTSTQG*KSRHLARYS*CVSCP*DTGVQTPTCTLRQE*EG*PET*RKTLYCTCSTGLILTV*TKQKVHTN*KIGSLIPTSRRSATGINLTDGTP  487
                KDTLN*TPVHRL+GYLAH*DQIQHFQRTLSAGCWSPVGPYPTSTQG*KSRHLARYS*CVSCP*DTGVQTPTCTLRQE*EG*PET*RKTLYCTCSTGLILTV*TKQKVHTN*KI SLIPTSRRSATGIN TDGTP
Subject   8583  KDTLN*TPVHRLEGYLAH*DQIQHFQRTLSAGCWSPVGPYPTSTQG*KSRHLARYS*CVSCP*DTGVQTPTCTLRQE*EG*PET*RKTLYCTCSTGLILTV*TKQKVHTN*KIWSLIPTSRRSATGINFTDGTP  8984

Range 12: 9029 to 9070 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.0 bits(81) 0.0 14/14(100%) 0/14(0%) Minus/Minus
Query      532  NACTSYAQCRMHDL  573
                NACTSYAQCRMHDL
Subject   9029  NACTSYAQCRMHDL  9070

Range 13: 8500 to 8538 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.3 bits(73) 0.0 13/13(100%) 0/13(0%) Minus/Minus
Query        3  LRY*PHEEPRHRN  41
                LRY*PHEEPRHRN
Subject   8500  LRY*PHEEPRHRN  8538

Range 14: 9113 to 9169 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.5 bits(69) 0.0 15/19(79%) 0/19(0%) Minus/Minus
Query      616  CWVCLVPSGPSTFSAP*SR  672
                C    VPSGPSTFSAP*SR
Subject   9113  CLSPTVPSGPSTFSAP*SR  9169

Grapevine leafroll associated virus 3 isolate WA MR, complete genome

Sequence ID: GU983863.1 Length: 18498 Number of Matches: 14

Range 1: 9077 to 9694 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
472.1 bits(1024) 0.0 201/206(98%) 0/206(0%) Plus/Plus
Query        1  VFLCLGSS*G*YRRVVVLISVIYFFVFS*ACHP*G*YRWHSFLKWVLKTQFFNLCVLFVLFTP*G*DRWNMYSRGFFFKSRVTLPTLVGAYMWEFELPYLTDKRHISYSAPSVATFSLVSR*DRGQQVTNSLHLRCAGSVGFGLSVPNILLGDVQESSLVCLWGMTGATRFRTVAAM*VVHAALCVRRACIWASALGQRRSGD*QP  618
                VFLCLGSS*G*YRRVVVLISVIYFFVFS*ACHP* *YRWHSFLKWVLKT+ F LCVLFVLFTP*G*DRWNMYSRGFFFKS VTLPTLVGAYMWEFELPYLTDKRHISYSAPSVATFSLVSR*DRGQQVTNSLHLRCAGSVGFGLSVPNILLGDVQESSLVCLWGMTGATRFRTVAAM*VVHAALCVRRACIWASALGQRRSGD*QP
Subject   9077  VFLCLGSS*G*YRRVVVLISVIYFFVFS*ACHP*S*YRWHSFLKWVLKTKIFYLCVLFVLFTP*G*DRWNMYSRGFFFKSWVTLPTLVGAYMWEFELPYLTDKRHISYSAPSVATFSLVSR*DRGQQVTNSLHLRCAGSVGFGLSVPNILLGDVQESSLVCLWGMTGATRFRTVAAM*VVHAALCVRRACIWASALGQRRSGD*QP  9694

Range 2: 9163 to 9732 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
451.9 bits(980) 0.0 185/190(97%) 0/190(0%) Minus/Minus
Query       87  YLQDLALSALRRAGC*SPDRRCPRALAQMHARLTHNAACTTYIAATVLNLVAPVIPQRHTKLDSCTSPKRIFGTLRPNPTLPAHLKCRLLVTCWPLSYLDTRLKVATLGAL*LMCLLSVRYGSSNSHMYAPTRVGRVTRDLKKNPLLYMFHRSYPHGVNKTKSTHKLKNWVFNTHFKKECHRY*PHGWHA  656
                YLQDLALSALRRAGC*SPDRRCPRALAQMHARLTHNAACTTYIAATVLNLVAPVIPQRHTKLDSCTSPKRIFGTLRPNPTLPAHLKCRLLVTCWPLSYLDTRLKVATLGAL*LMCLLSVRYGSSNSHMYAPTRVGRVT+DLKKNPLLYMFHRSYPHGVNKTKSTHK K  VFNTHFKKECHRY* HGWHA
Subject   9163  YLQDLALSALRRAGC*SPDRRCPRALAQMHARLTHNAACTTYIAATVLNLVAPVIPQRHTKLDSCTSPKRIFGTLRPNPTLPAHLKCRLLVTCWPLSYLDTRLKVATLGAL*LMCLLSVRYGSSNSHMYAPTRVGRVTQDLKKNPLLYMFHRSYPHGVNKTKSTHK*KILVFNTHFKKECHRY*LHGWHA  9732

Range 3: 9078 to 9119 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.3 bits(75) 0.0 14/14(100%) 0/14(0%) Minus/Minus
Query        2  PFGINLTKNRGTET  43
                PFGINLTKNRGTET
Subject   9078  PFGINLTKNRGTET  9119

Range 4: 9077 to 9559 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
373.1 bits(808) 0.0 159/161(99%) 0/161(0%) Minus/Minus
Query        1  TH*TRLLYIA*KDIWHTKTKSNTSSAP*VQAVGHLLAPILPRHKAKSRDTWRAIADVSLVRKIREFKLPHVRSDKSRKGNPRLKEKPSTVHVPPVLSSRCEQNKKYTQIKKLGL*YPLQEGVPPVLTSRMARLREDEKINN*DKYDDPSVLTSRRTEAQKH  483
                TH*TRLLYIA*KDIWHTKTKSNTSSAP*VQAVGHLLAPILPRHKAKSRDTWRAIADVSLVRKIREFKLPHVRSDKSRKGNPRLKEKPSTVHVPPVLSSRCEQNKKYTQIK  GL*YPLQEGVPPVLTSRMARLREDEKINN*DKYDDPSVLTSRRTEAQKH
Subject   9077  TH*TRLLYIA*KDIWHTKTKSNTSSAP*VQAVGHLLAPILPRHKAKSRDTWRAIADVSLVRKIREFKLPHVRSDKSRKGNPRLKEKPSTVHVPPVLSSRCEQNKKYTQIKNFGL*YPLQEGVPPVLTSRMARLREDEKINN*DKYDDPSVLTSRRTEAQKH  9559

Range 5: 9603 to 9731 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
104.6 bits(222) 0.0 43/43(100%) 0/43(0%) Minus/Minus
Query      527  TFRT*HFQRSVEPAASHLTDAALGHSPKCMHVLRTMPHARLT*  655
                TFRT*HFQRSVEPAASHLTDAALGHSPKCMHVLRTMPHARLT*
Subject   9603  TFRT*HFQRSVEPAASHLTDAALGHSPKCMHVLRTMPHARLT*  9731

Range 6: 9078 to 9563 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
331.0 bits(716) 0.0 160/162(99%) 0/162(0%) Plus/Plus
Query        2  CFCASVLREVNTEGSSYLSQLFIFSSSLRRAIREVNTGGTPS*SGY*RPNFLICVYFLFCSHREDKTGGTCTVEXXXXXXXXXXXXXXERTCGSLNSRILRTRDTSAIARQVSRLLALCRGRIGANR*PTACT*GALEVLDLVLVCQISF*AMYRSLV*CVF  487
                CFCASVLREVNTEGSSYLSQLFIFSSSLRRAIREVNTGGTPS*SGY*RP F ICVYFLFCSHREDKTGGTCTVEGFSLSLGLPFLLLSERTCGSLNSRILRTRDTSAIARQVSRLLALCRGRIGANR*PTACT*GALEVLDLVLVCQISF*AMYRSLV*CVF
Subject   9078  CFCASVLREVNTEGSSYLSQLFIFSSSLRRAIREVNTGGTPS*SGY*RPKFFICVYFLFCSHREDKTGGTCTVEGFSLSLGLPFLLLSERTCGSLNSRILRTRDTSAIARQVSRLLALCRGRIGANR*PTACT*GALEVLDLVLVCQISF*AMYRSLV*CVF  9563

Range 7: 9595 to 9732 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
110.1 bits(234) 0.0 46/46(100%) 0/46(0%) Plus/Plus
Query      519  CSCYVSRACGIVRKTCMHLGECPRAASVR*LAAGSTER*KC*VLKV  656
                CSCYVSRACGIVRKTCMHLGECPRAASVR*LAAGSTER*KC*VLKV
Subject   9595  CSCYVSRACGIVRKTCMHLGECPRAASVR*LAAGSTER*KC*VLKV  9732

Range 8: 9268 to 9540 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
222.8 bits(480) 0.0 90/91(99%) 0/91(0%) Plus/Plus
Query      192  RIRPVEHVQ*RVFL*VSGYPSYSCRSVHVGV*TPVSYGQETHQL*RAKCRDF*PCVEVG*GPTGDQQPALKVRWKCWIWS*CAKYPFRRCT  464
                RIRPVEHVQ*RVFL*V GYPSYSCRSVHVGV*TPVSYGQETHQL*RAKCRDF*PCVEVG*GPTGDQQPALKVRWKCWIWS*CAKYPFRRCT
Subject   9268  RIRPVEHVQ*RVFL*VLGYPSYSCRSVHVGV*TPVSYGQETHQL*RAKCRDF*PCVEVG*GPTGDQQPALKVRWKCWIWS*CAKYPFRRCT  9540

Range 9: 9079 to 9222 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
109.7 bits(233) 0.0 47/48(98%) 0/48(0%) Plus/Plus
Query        3  VSVPRFFVRLIPKGRRTYLSYLFFRLLLGVPSVRLIPVALLLEVGIKD  146
                VSVPRFFVRLIPKGRRTYLSYLFFRLLLGVPSV+LIPVALLLEVGIKD
Subject   9079  VSVPRFFVRLIPKGRRTYLSYLFFRLLLGVPSVKLIPVALLLEVGIKD  9222

Range 10: 9606 to 9734 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
105.5 bits(224) 0.0 43/43(100%) 0/43(0%) Plus/Plus
Query      530  CKSCMRHCA*DVHAFGRVP*GSVGQVTSSRLYGALKVLGPEGT  658
                CKSCMRHCA*DVHAFGRVP*GSVGQVTSSRLYGALKVLGPEGT
Subject   9606  CKSCMRHCA*DVHAFGRVP*GSVGQVTSSRLYGALKVLGPEGT  9734

Range 11: 9162 to 9563 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
304.4 bits(658) 0.0 129/134(96%) 0/134(0%) Minus/Minus
Query       86  KDTLN*TPVHRLKGYLAH*DQIQHFQRTLSAGCWSPVGPYPTSTQG*KSRHLARYS*CVSCP*DTGVQTPTCTLRQE*EG*PET*RKTLYCTCSTGLILTV*TKQKVHTN*KIGSLIPTSRRSATGINLTDGTP  487
                KDTLN*TPVHRLKGYLAH*DQIQHFQRTLSAGCWSPVGPYPTSTQG*KSRHLARYS*CVSCP*DTGVQTPTCTLRQE*EG*P+T*RKTLYCTCSTGLILTV*TKQKVHTN K  SLIPTSRRSATGIN TDGTP
Subject   9162  KDTLN*TPVHRLKGYLAH*DQIQHFQRTLSAGCWSPVGPYPTSTQG*KSRHLARYS*CVSCP*DTGVQTPTCTLRQE*EG*PKT*RKTLYCTCSTGLILTV*TKQKVHTNKKFWSLIPTSRRSATGINFTDGTP  9563

Range 12: 9608 to 9649 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.0 bits(81) 0.0 14/14(100%) 0/14(0%) Minus/Minus
Query      532  NACTSYAQCRMHDL  573
                NACTSYAQCRMHDL
Subject   9608  NACTSYAQCRMHDL  9649

Range 13: 9079 to 9117 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.3 bits(73) 0.0 13/13(100%) 0/13(0%) Minus/Minus
Query        3  LRY*PHEEPRHRN  41
                LRY*PHEEPRHRN
Subject   9079  LRY*PHEEPRHRN  9117

Range 14: 9692 to 9748 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.5 bits(69) 0.0 15/19(79%) 0/19(0%) Minus/Minus
Query      616  CWVCLVPSGPSTFSAP*SR  672
                C    VPSGPSTFSAP*SR
Subject   9692  CLSPTVPSGPSTFSAP*SR  9748

Nucleotide Sequence (341 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
35
70
105
140
175
210
245
280
315
341

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
287.4 1478.4 25% 4.471e-76 100% GQ352632.1
287.4 1478.4 25% 4.471e-76 100% EU259806.1
287.4 1478.4 25% 4.471e-76 100% KX756668.1
285.6 1461.5 25% 1.593e-75 96% KX701860.1
284.7 1468.4 25% 3.006e-75 98% KJ174518.1

Alignments

Grapevine leafroll associated virus 3 isolate 623, complete genome

Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 9

Range 1: 6975 to 7313 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
287.4 bits(621) 0.0 113/113(100%) 0/113(0%) Minus/Minus
Query        1  CMS*QTNKYMRLFSEQ*VICLLCPEQHHITECFSLCFMYCHHWCFFPFSLQRPLHIRLLQLGHAQIHVSVYFSHVISSSNWPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQ  339
                CMS*QTNKYMRLFSEQ*VICLLCPEQHHITECFSLCFMYCHHWCFFPFSLQRPLHIRLLQLGHAQIHVSVYFSHVISSSNWPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQ
Subject   6975  CMS*QTNKYMRLFSEQ*VICLLCPEQHHITECFSLCFMYCHHWCFFPFSLQRPLHIRLLQLGHAQIHVSVYFSHVISSSNWPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQ  7313

Range 2: 6975 to 7313 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
265.7 bits(579) 0.0 113/113(100%) 0/113(0%) Plus/Plus
Query        1  LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFGDVVLFRTKKADDSLFTKQPHILVGLSRHT  339
                LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFGDVVLFRTKKADDSLFTKQPHILVGLSRHT
Subject   6975  LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFGDVVLFRTKKADDSLFTKQPHILVGLSRHT  7313

Range 3: 7168 to 7314 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.0 bits(273) 0.0 49/49(100%) 0/49(0%) Plus/Plus
Query      194  EKGKKHQ**QYMKHREKHSVMWCCSGQRRQMTHCSLNNRIYLLVCQDIH  340
                EKGKKHQ**QYMKHREKHSVMWCCSGQRRQMTHCSLNNRIYLLVCQDIH
Subject   7168  EKGKKHQ**QYMKHREKHSVMWCCSGQRRQMTHCSLNNRIYLLVCQDIH  7314

Range 4: 6976 to 7137 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
127.1 bits(271) 0.0 54/54(100%) 0/54(0%) Plus/Plus
Query        2  CPQ*P*GERKSVTLKRSLVVRISR**DHCPKGQLELLMTWLK*TLTCICA*PSW  163
                CPQ*P*GERKSVTLKRSLVVRISR**DHCPKGQLELLMTWLK*TLTCICA*PSW
Subject   6976  CPQ*P*GERKSVTLKRSLVVRISR**DHCPKGQLELLMTWLK*TLTCICA*PSW  7137

Range 5: 6977 to 7315 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
225.6 bits(486) 0.0 113/113(100%) 0/113(0%) Plus/Plus
Query        3  VLNDRKGNGKVLP*KGR*W*G*AGSEITVQKANWNY**RG*NKR*RVFVHDPXXXXXXXXXXXXKRERNTSDDST*STGKNIR*CGVVQDKEGR*LIVH*TTAYTCWSVKTYT  341
                VLNDRKGNGKVLP*KGR*W*G*AGSEITVQKANWNY**RG*NKR*RVFVHDPVGEVGYEEVVEGKRERNTSDDST*STGKNIR*CGVVQDKEGR*LIVH*TTAYTCWSVKTYT
Subject   6977  VLNDRKGNGKVLP*KGR*W*G*AGSEITVQKANWNY**RG*NKR*RVFVHDPVGEVGYEEVVEGKRERNTSDDST*STGKNIR*CGVVQDKEGR*LIVH*TTAYTCWSVKTYT  7315

Range 6: 7073 to 7315 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
202.2 bits(435) 0.0 81/81(100%) 0/81(0%) Minus/Minus
Query       99  RVCLDRPTSICGCLVNNESSAFFVLNNTTSPNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI  341
                RVCLDRPTSICGCLVNNESSAFFVLNNTTSPNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI
Subject   7073  RVCLDRPTSICGCLVNNESSAFFVLNNTTSPNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI  7315

Range 7: 6977 to 7021 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.8 bits(74) 0.0 15/15(100%) 0/15(0%) Minus/Minus
Query        3  FSG*HFSVPLTVIED  47
                FSG*HFSVPLTVIED
Subject   6977  FSG*HFSVPLTVIED  7021

Range 8: 6976 to 7131 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
132.1 bits(282) 0.0 52/52(100%) 0/52(0%) Minus/Minus
Query        2  GSCTNTRQRLFQPRHQ*FQLAFWTVISLPAYPYH*RPFQGNTFPFPLRSLRT  157
                GSCTNTRQRLFQPRHQ*FQLAFWTVISLPAYPYH*RPFQGNTFPFPLRSLRT
Subject   6976  GSCTNTRQRLFQPRHQ*FQLAFWTVISLPAYPYH*RPFQGNTFPFPLRSLRT  7131

Range 9: 7219 to 7314 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.5 bits(154) 0.0 32/32(100%) 0/32(0%) Minus/Minus
Query      245  VYVLTDQQVYAVV**TMSHLPSLS*TTPHHRM  340
                VYVLTDQQVYAVV**TMSHLPSLS*TTPHHRM
Subject   7219  VYVLTDQQVYAVV**TMSHLPSLS*TTPHHRM  7314

Grapevine leafroll associated virus 3 isolate GP18, complete genome

Sequence ID: EU259806.1 Length: 18498 Number of Matches: 9

Range 1: 6975 to 7313 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
287.4 bits(621) 0.0 113/113(100%) 0/113(0%) Minus/Minus
Query        1  CMS*QTNKYMRLFSEQ*VICLLCPEQHHITECFSLCFMYCHHWCFFPFSLQRPLHIRLLQLGHAQIHVSVYFSHVISSSNWPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQ  339
                CMS*QTNKYMRLFSEQ*VICLLCPEQHHITECFSLCFMYCHHWCFFPFSLQRPLHIRLLQLGHAQIHVSVYFSHVISSSNWPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQ
Subject   6975  CMS*QTNKYMRLFSEQ*VICLLCPEQHHITECFSLCFMYCHHWCFFPFSLQRPLHIRLLQLGHAQIHVSVYFSHVISSSNWPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQ  7313

Range 2: 6975 to 7313 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
265.7 bits(579) 0.0 113/113(100%) 0/113(0%) Plus/Plus
Query        1  LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFGDVVLFRTKKADDSLFTKQPHILVGLSRHT  339
                LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFGDVVLFRTKKADDSLFTKQPHILVGLSRHT
Subject   6975  LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFGDVVLFRTKKADDSLFTKQPHILVGLSRHT  7313

Range 3: 7168 to 7314 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.0 bits(273) 0.0 49/49(100%) 0/49(0%) Plus/Plus
Query      194  EKGKKHQ**QYMKHREKHSVMWCCSGQRRQMTHCSLNNRIYLLVCQDIH  340
                EKGKKHQ**QYMKHREKHSVMWCCSGQRRQMTHCSLNNRIYLLVCQDIH
Subject   7168  EKGKKHQ**QYMKHREKHSVMWCCSGQRRQMTHCSLNNRIYLLVCQDIH  7314

Range 4: 6976 to 7137 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
127.1 bits(271) 0.0 54/54(100%) 0/54(0%) Plus/Plus
Query        2  CPQ*P*GERKSVTLKRSLVVRISR**DHCPKGQLELLMTWLK*TLTCICA*PSW  163
                CPQ*P*GERKSVTLKRSLVVRISR**DHCPKGQLELLMTWLK*TLTCICA*PSW
Subject   6976  CPQ*P*GERKSVTLKRSLVVRISR**DHCPKGQLELLMTWLK*TLTCICA*PSW  7137

Range 5: 6977 to 7315 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
225.6 bits(486) 0.0 113/113(100%) 0/113(0%) Plus/Plus
Query        3  VLNDRKGNGKVLP*KGR*W*G*AGSEITVQKANWNY**RG*NKR*RVFVHDPXXXXXXXXXXXXKRERNTSDDST*STGKNIR*CGVVQDKEGR*LIVH*TTAYTCWSVKTYT  341
                VLNDRKGNGKVLP*KGR*W*G*AGSEITVQKANWNY**RG*NKR*RVFVHDPVGEVGYEEVVEGKRERNTSDDST*STGKNIR*CGVVQDKEGR*LIVH*TTAYTCWSVKTYT
Subject   6977  VLNDRKGNGKVLP*KGR*W*G*AGSEITVQKANWNY**RG*NKR*RVFVHDPVGEVGYEEVVEGKRERNTSDDST*STGKNIR*CGVVQDKEGR*LIVH*TTAYTCWSVKTYT  7315

Range 6: 7073 to 7315 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
202.2 bits(435) 0.0 81/81(100%) 0/81(0%) Minus/Minus
Query       99  RVCLDRPTSICGCLVNNESSAFFVLNNTTSPNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI  341
                RVCLDRPTSICGCLVNNESSAFFVLNNTTSPNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI
Subject   7073  RVCLDRPTSICGCLVNNESSAFFVLNNTTSPNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI  7315

Range 7: 6977 to 7021 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.8 bits(74) 0.0 15/15(100%) 0/15(0%) Minus/Minus
Query        3  FSG*HFSVPLTVIED  47
                FSG*HFSVPLTVIED
Subject   6977  FSG*HFSVPLTVIED  7021

Range 8: 6976 to 7131 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
132.1 bits(282) 0.0 52/52(100%) 0/52(0%) Minus/Minus
Query        2  GSCTNTRQRLFQPRHQ*FQLAFWTVISLPAYPYH*RPFQGNTFPFPLRSLRT  157
                GSCTNTRQRLFQPRHQ*FQLAFWTVISLPAYPYH*RPFQGNTFPFPLRSLRT
Subject   6976  GSCTNTRQRLFQPRHQ*FQLAFWTVISLPAYPYH*RPFQGNTFPFPLRSLRT  7131

Range 9: 7219 to 7314 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.5 bits(154) 0.0 32/32(100%) 0/32(0%) Minus/Minus
Query      245  VYVLTDQQVYAVV**TMSHLPSLS*TTPHHRM  340
                VYVLTDQQVYAVV**TMSHLPSLS*TTPHHRM
Subject   7219  VYVLTDQQVYAVV**TMSHLPSLS*TTPHHRM  7314

Grapevine leafroll associated virus 3 isolate TC BR, complete genome

Sequence ID: KX756668.1 Length: 18498 Number of Matches: 9

Range 1: 6975 to 7313 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
287.4 bits(621) 0.0 113/113(100%) 0/113(0%) Minus/Minus
Query        1  CMS*QTNKYMRLFSEQ*VICLLCPEQHHITECFSLCFMYCHHWCFFPFSLQRPLHIRLLQLGHAQIHVSVYFSHVISSSNWPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQ  339
                CMS*QTNKYMRLFSEQ*VICLLCPEQHHITECFSLCFMYCHHWCFFPFSLQRPLHIRLLQLGHAQIHVSVYFSHVISSSNWPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQ
Subject   6975  CMS*QTNKYMRLFSEQ*VICLLCPEQHHITECFSLCFMYCHHWCFFPFSLQRPLHIRLLQLGHAQIHVSVYFSHVISSSNWPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQ  7313

Range 2: 6975 to 7313 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
265.7 bits(579) 0.0 113/113(100%) 0/113(0%) Plus/Plus
Query        1  LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFGDVVLFRTKKADDSLFTKQPHILVGLSRHT  339
                LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFGDVVLFRTKKADDSLFTKQPHILVGLSRHT
Subject   6975  LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFGDVVLFRTKKADDSLFTKQPHILVGLSRHT  7313

Range 3: 7168 to 7314 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.0 bits(273) 0.0 49/49(100%) 0/49(0%) Plus/Plus
Query      194  EKGKKHQ**QYMKHREKHSVMWCCSGQRRQMTHCSLNNRIYLLVCQDIH  340
                EKGKKHQ**QYMKHREKHSVMWCCSGQRRQMTHCSLNNRIYLLVCQDIH
Subject   7168  EKGKKHQ**QYMKHREKHSVMWCCSGQRRQMTHCSLNNRIYLLVCQDIH  7314

Range 4: 6976 to 7137 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
127.1 bits(271) 0.0 54/54(100%) 0/54(0%) Plus/Plus
Query        2  CPQ*P*GERKSVTLKRSLVVRISR**DHCPKGQLELLMTWLK*TLTCICA*PSW  163
                CPQ*P*GERKSVTLKRSLVVRISR**DHCPKGQLELLMTWLK*TLTCICA*PSW
Subject   6976  CPQ*P*GERKSVTLKRSLVVRISR**DHCPKGQLELLMTWLK*TLTCICA*PSW  7137

Range 5: 6977 to 7315 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
225.6 bits(486) 0.0 113/113(100%) 0/113(0%) Plus/Plus
Query        3  VLNDRKGNGKVLP*KGR*W*G*AGSEITVQKANWNY**RG*NKR*RVFVHDPXXXXXXXXXXXXKRERNTSDDST*STGKNIR*CGVVQDKEGR*LIVH*TTAYTCWSVKTYT  341
                VLNDRKGNGKVLP*KGR*W*G*AGSEITVQKANWNY**RG*NKR*RVFVHDPVGEVGYEEVVEGKRERNTSDDST*STGKNIR*CGVVQDKEGR*LIVH*TTAYTCWSVKTYT
Subject   6977  VLNDRKGNGKVLP*KGR*W*G*AGSEITVQKANWNY**RG*NKR*RVFVHDPVGEVGYEEVVEGKRERNTSDDST*STGKNIR*CGVVQDKEGR*LIVH*TTAYTCWSVKTYT  7315

Range 6: 7073 to 7315 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
202.2 bits(435) 0.0 81/81(100%) 0/81(0%) Minus/Minus
Query       99  RVCLDRPTSICGCLVNNESSAFFVLNNTTSPNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI  341
                RVCLDRPTSICGCLVNNESSAFFVLNNTTSPNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI
Subject   7073  RVCLDRPTSICGCLVNNESSAFFVLNNTTSPNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI  7315

Range 7: 6977 to 7021 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.8 bits(74) 0.0 15/15(100%) 0/15(0%) Minus/Minus
Query        3  FSG*HFSVPLTVIED  47
                FSG*HFSVPLTVIED
Subject   6977  FSG*HFSVPLTVIED  7021

Range 8: 6976 to 7131 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
132.1 bits(282) 0.0 52/52(100%) 0/52(0%) Minus/Minus
Query        2  GSCTNTRQRLFQPRHQ*FQLAFWTVISLPAYPYH*RPFQGNTFPFPLRSLRT  157
                GSCTNTRQRLFQPRHQ*FQLAFWTVISLPAYPYH*RPFQGNTFPFPLRSLRT
Subject   6976  GSCTNTRQRLFQPRHQ*FQLAFWTVISLPAYPYH*RPFQGNTFPFPLRSLRT  7131

Range 9: 7219 to 7314 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.5 bits(154) 0.0 32/32(100%) 0/32(0%) Minus/Minus
Query      245  VYVLTDQQVYAVV**TMSHLPSLS*TTPHHRM  340
                VYVLTDQQVYAVV**TMSHLPSLS*TTPHHRM
Subject   7219  VYVLTDQQVYAVV**TMSHLPSLS*TTPHHRM  7314

Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome

Sequence ID: KX701860.1 Length: 18020 Number of Matches: 9

Range 1: 6493 to 6831 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
285.6 bits(617) 0.0 112/113(99%) 0/113(0%) Minus/Minus
Query        1  CMS*QTNKYMRLFSEQ*VICLLCPEQHHITECFSLCFMYCHHWCFFPFSLQRPLHIRLLQLGHAQIHVSVYFSHVISSSNWPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQ  339
                CMS*QTNKYMRLFSEQ*VICLLCPEQHHITECFSLCFMYCHHWCFFPFSLQRPLHIRLLQLGHAQIHV VYFSHVISSSNWPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQ
Subject   6493  CMS*QTNKYMRLFSEQ*VICLLCPEQHHITECFSLCFMYCHHWCFFPFSLQRPLHIRLLQLGHAQIHVGVYFSHVISSSNWPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQ  6831

Range 2: 6493 to 6831 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
265.3 bits(578) 0.0 112/113(99%) 0/113(0%) Plus/Plus
Query        1  LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFGDVVLFRTKKADDSLFTKQPHILVGLSRHT  339
                LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAE+NADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFGDVVLFRTKKADDSLFTKQPHILVGLSRHT
Subject   6493  LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEVNADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFGDVVLFRTKKADDSLFTKQPHILVGLSRHT  6831

Range 3: 6686 to 6832 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.0 bits(273) 0.0 49/49(100%) 0/49(0%) Plus/Plus
Query      194  EKGKKHQ**QYMKHREKHSVMWCCSGQRRQMTHCSLNNRIYLLVCQDIH  340
                EKGKKHQ**QYMKHREKHSVMWCCSGQRRQMTHCSLNNRIYLLVCQDIH
Subject   6686  EKGKKHQ**QYMKHREKHSVMWCCSGQRRQMTHCSLNNRIYLLVCQDIH  6832

Range 4: 6494 to 6655 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.9 bits(264) 0.0 53/54(98%) 0/54(0%) Plus/Plus
Query        2  CPQ*P*GERKSVTLKRSLVVRISR**DHCPKGQLELLMTWLK*TLTCICA*PSW  163
                CPQ*P*GERKSVTLKRSLVVRISR**DHCPKGQLELLMTWLK*T TCICA*PSW
Subject   6494  CPQ*P*GERKSVTLKRSLVVRISR**DHCPKGQLELLMTWLK*TPTCICA*PSW  6655

Range 5: 6495 to 6833 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
221.0 bits(476) 0.0 111/113(98%) 0/113(0%) Plus/Plus
Query        3  VLNDRKGNGKVLP*KGR*W*G*AGSEITVQKANWNY**RG*NKR*RVFVHDPXXXXXXXXXXXXKRERNTSDDST*STGKNIR*CGVVQDKEGR*LIVH*TTAYTCWSVKTYT  341
                VLNDRKGNGKVLP*KGR*W*G*AGSEITVQKANWNY**RG*+KR RVFVHDPVGEVGYEEVVEGKRERNTSDDST*STGKNIR*CGVVQDKEGR*LIVH*TTAYTCWSVKTYT
Subject   6495  VLNDRKGNGKVLP*KGR*W*G*AGSEITVQKANWNY**RG*SKRRRVFVHDPVGEVGYEEVVEGKRERNTSDDST*STGKNIR*CGVVQDKEGR*LIVH*TTAYTCWSVKTYT  6833

Range 6: 6591 to 6833 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
199.9 bits(430) 0.0 80/81(99%) 0/81(0%) Minus/Minus
Query       99  RVCLDRPTSICGCLVNNESSAFFVLNNTTSPNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI  341
                RVCLDRPTSICGCLVNNESSAFFVLNNTTSPNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAF SATSSVVPI
Subject   6591  RVCLDRPTSICGCLVNNESSAFFVLNNTTSPNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFTSATSSVVPI  6833

Range 7: 6495 to 6539 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.8 bits(74) 0.0 15/15(100%) 0/15(0%) Minus/Minus
Query        3  FSG*HFSVPLTVIED  47
                FSG*HFSVPLTVIED
Subject   6495  FSG*HFSVPLTVIED  6539

Range 8: 6494 to 6649 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
127.5 bits(272) 0.0 50/52(96%) 0/52(0%) Minus/Minus
Query        2  GSCTNTRQRLFQPRHQ*FQLAFWTVISLPAYPYH*RPFQGNTFPFPLRSLRT  157
                GSCTNTR+RL QPRHQ*FQLAFWTVISLPAYPYH*RPFQGNTFPFPLRSLRT
Subject   6494  GSCTNTRRRLLQPRHQ*FQLAFWTVISLPAYPYH*RPFQGNTFPFPLRSLRT  6649

Range 9: 6737 to 6832 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.5 bits(154) 0.0 32/32(100%) 0/32(0%) Minus/Minus
Query      245  VYVLTDQQVYAVV**TMSHLPSLS*TTPHHRM  340
                VYVLTDQQVYAVV**TMSHLPSLS*TTPHHRM
Subject   6737  VYVLTDQQVYAVV**TMSHLPSLS*TTPHHRM  6832

Grapevine leafroll associated virus 3, complete genome

Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 9

Range 1: 6975 to 7313 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
284.7 bits(615) 0.0 112/113(99%) 0/113(0%) Minus/Minus
Query        1  CMS*QTNKYMRLFSEQ*VICLLCPEQHHITECFSLCFMYCHHWCFFPFSLQRPLHIRLLQLGHAQIHVSVYFSHVISSSNWPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQ  339
                CMS*QTNKYMRLFSEQ*VICLLCPEQHHITECFSLCFMYCHHWCFFPFSLQRPLHIRLLQLGHAQIHVSVY SHVISSSNWPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQ
Subject   6975  CMS*QTNKYMRLFSEQ*VICLLCPEQHHITECFSLCFMYCHHWCFFPFSLQRPLHIRLLQLGHAQIHVSVYLSHVISSSNWPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQ  7313

Range 2: 6975 to 7313 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
265.7 bits(579) 0.0 113/113(100%) 0/113(0%) Plus/Plus
Query        1  LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFGDVVLFRTKKADDSLFTKQPHILVGLSRHT  339
                LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFGDVVLFRTKKADDSLFTKQPHILVGLSRHT
Subject   6975  LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFGDVVLFRTKKADDSLFTKQPHILVGLSRHT  7313

Range 3: 7168 to 7314 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.0 bits(273) 0.0 49/49(100%) 0/49(0%) Plus/Plus
Query      194  EKGKKHQ**QYMKHREKHSVMWCCSGQRRQMTHCSLNNRIYLLVCQDIH  340
                EKGKKHQ**QYMKHREKHSVMWCCSGQRRQMTHCSLNNRIYLLVCQDIH
Subject   7168  EKGKKHQ**QYMKHREKHSVMWCCSGQRRQMTHCSLNNRIYLLVCQDIH  7314

Range 4: 6976 to 7137 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
125.7 bits(268) 0.0 53/54(98%) 0/54(0%) Plus/Plus
Query        2  CPQ*P*GERKSVTLKRSLVVRISR**DHCPKGQLELLMTWLK*TLTCICA*PSW  163
                CPQ*P*GERKSVTLKRSLVVRISR**DHCPKGQLELLMTWL+*TLTCICA*PSW
Subject   6976  CPQ*P*GERKSVTLKRSLVVRISR**DHCPKGQLELLMTWLR*TLTCICA*PSW  7137

Range 5: 6977 to 7315 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
223.3 bits(481) 0.0 112/113(99%) 0/113(0%) Plus/Plus
Query        3  VLNDRKGNGKVLP*KGR*W*G*AGSEITVQKANWNY**RG*NKR*RVFVHDPXXXXXXXXXXXXKRERNTSDDST*STGKNIR*CGVVQDKEGR*LIVH*TTAYTCWSVKTYT  341
                VLNDRKGNGKVLP*KGR*W*G*AGSEITVQKANWNY**RG*+KR*RVFVHDPVGEVGYEEVVEGKRERNTSDDST*STGKNIR*CGVVQDKEGR*LIVH*TTAYTCWSVKTYT
Subject   6977  VLNDRKGNGKVLP*KGR*W*G*AGSEITVQKANWNY**RG*DKR*RVFVHDPVGEVGYEEVVEGKRERNTSDDST*STGKNIR*CGVVQDKEGR*LIVH*TTAYTCWSVKTYT  7315

Range 6: 7073 to 7315 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
202.2 bits(435) 0.0 81/81(100%) 0/81(0%) Minus/Minus
Query       99  RVCLDRPTSICGCLVNNESSAFFVLNNTTSPNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI  341
                RVCLDRPTSICGCLVNNESSAFFVLNNTTSPNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI
Subject   7073  RVCLDRPTSICGCLVNNESSAFFVLNNTTSPNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI  7315

Range 7: 6977 to 7021 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.8 bits(74) 0.0 15/15(100%) 0/15(0%) Minus/Minus
Query        3  FSG*HFSVPLTVIED  47
                FSG*HFSVPLTVIED
Subject   6977  FSG*HFSVPLTVIED  7021

Range 8: 6976 to 7131 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.4 bits(274) 0.0 51/52(98%) 0/52(0%) Minus/Minus
Query        2  GSCTNTRQRLFQPRHQ*FQLAFWTVISLPAYPYH*RPFQGNTFPFPLRSLRT  157
                GSCTNTRQRL QPRHQ*FQLAFWTVISLPAYPYH*RPFQGNTFPFPLRSLRT
Subject   6976  GSCTNTRQRLSQPRHQ*FQLAFWTVISLPAYPYH*RPFQGNTFPFPLRSLRT  7131

Range 9: 7219 to 7314 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.5 bits(154) 0.0 32/32(100%) 0/32(0%) Minus/Minus
Query      245  VYVLTDQQVYAVV**TMSHLPSLS*TTPHHRM  340
                VYVLTDQQVYAVV**TMSHLPSLS*TTPHHRM
Subject   7219  VYVLTDQQVYAVV**TMSHLPSLS*TTPHHRM  7314

Nucleotide Sequence (192 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
20
40
60
80
100
120
140
160
180
192

Descriptions

Alignments

Grapevine leafroll associated virus 3 isolate 3138 07, complete genome

Sequence ID: JX559645.1 Length: 18498 Number of Matches: 6

Range 1: 8497 to 8685 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
150.0 bits(321) 0.0 63/63(100%) 0/63(0%) Plus/Plus
Query        2  VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF  190
                VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF
Subject   8497  VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF  8685

Range 2: 8498 to 8686 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
147.2 bits(315) 0.0 63/63(100%) 0/63(0%) Minus/Minus
Query        3  KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*V  191
                KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*V
Subject   8498  KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*V  8686

Range 3: 8496 to 8630 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
95.5 bits(202) 0.0 45/45(100%) 0/45(0%) Plus/Plus
Query        1  ST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P  135
                ST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P
Subject   8496  ST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P  8630

Range 4: 8612 to 8686 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.8 bits(111) 0.0 25/25(100%) 0/25(0%) Plus/Plus
Query      117  T*RYLTKLLLIFVLSF*FKSRIVSF  191
                T*RYLTKLLLIFVLSF*FKSRIVSF
Subject   8612  T*RYLTKLLLIFVLSF*FKSRIVSF  8686

Range 5: 8547 to 8687 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
108.3 bits(230) 0.0 47/47(100%) 0/47(0%) Minus/Minus
Query       52  KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR  192
                KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR
Subject   8547  KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR  8687

Range 6: 8497 to 8685 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
86.3 bits(182) 0.0 63/63(100%) 0/63(0%) Minus/Minus
Query        2  KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQXXXXXXXRLPTKYEAXXXXXXXXXXX*SPKY  190
                KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQNRRINI*RLPTKYEAIITTNYNITII*SPKY
Subject   8497  KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQNRRINI*RLPTKYEAIITTNYNITII*SPKY  8685

Grapevine leafroll associated virus 3, complete genome

Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 6

Range 1: 7918 to 8106 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
150.0 bits(321) 0.0 63/63(100%) 0/63(0%) Plus/Plus
Query        2  VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF  190
                VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF
Subject   7918  VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF  8106

Range 2: 7919 to 8107 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
134.4 bits(287) 0.0 59/63(94%) 0/63(0%) Minus/Minus
Query        3  KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*V  191
                KRDYPRLELKT*NKN EQLG* SLRQNQNYRSEPTYQY TAAD*I*GYHH *LQYNYNLIP*V
Subject   7919  KRDYPRLELKT*NKNMEQLG*KSLRQNQNYRSEPTYQYPTAAD*I*GYHHR*LQYNYNLIP*V  8107

Range 3: 7917 to 8051 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
81.3 bits(171) 0.0 41/45(91%) 0/45(0%) Plus/Plus
Query        1  ST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P  135
                ST*GIRL*LYCS* ***P+I*SAAV Y*YVGSER*FWF*RKD *P
Subject   7917  ST*GIRL*LYCS*R***PYI*SAAVGY*YVGSER*FWF*RKDF*P  8051

Range 4: 8033 to 8107 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 23/25(92%) 0/25(0%) Plus/Plus
Query      117  T*RYLTKLLLIFVLSF*FKSRIVSF  191
                T*R+LTKLL IFVLSF*FKSRIVSF
Subject   8033  T*RFLTKLLHIFVLSF*FKSRIVSF  8107

Range 5: 7968 to 8108 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.4 bits(215) 0.0 44/47(94%) 0/47(0%) Minus/Minus
Query       52  KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR  192
                KKRLSST*TKNLEQK GAAWL IFTSKPKLSLRTDVSISNGCRLN+R
Subject   7968  KKRLSST*TKNLEQKYGAAWLKIFTSKPKLSLRTDVSISNGCRLNIR  8108

Range 6: 7918 to 8106 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.0 bits(164) 0.0 58/63(92%) 0/63(0%) Minus/Minus
Query        2  KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQXXXXXXXRLPTKYEAXXXXXXXXXXX*SPKY  190
                KETILDLN*KLRTKI SSLVK LYVKTKIIAQNRRINI RLPTKY+AIIT NYNITII*SPKY
Subject   7918  KETILDLN*KLRTKIWSSLVKNLYVKTKIIAQNRRINIQRLPTKYKAIITANYNITII*SPKY  8106

Grapevine leafroll associated virus 3 isolate IB 31 RNA dependent RNA polymerase gene, partial cds

Sequence ID: KP844580.1 Length: 954 Number of Matches: 6

Range 1: 701 to 889 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
150.0 bits(321) 0.0 63/63(100%) 0/63(0%) Plus/Plus
Query        2  VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF  190
                VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF
Subject    701  VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF  889

Range 2: 702 to 890 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.0 bits(308) 0.0 62/63(98%) 0/63(0%) Minus/Minus
Query        3  KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*V  191
                KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRS PTYQYLTAAD*I*GYHHH*LQYNYNLIP*V
Subject    702  KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSGPTYQYLTAAD*I*GYHHH*LQYNYNLIP*V  890

Range 3: 700 to 834 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
93.2 bits(197) 0.0 44/45(98%) 0/45(0%) Plus/Plus
Query        1  ST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P  135
                ST*GIRL*LYCS*W***PHI*SAAVRY*YVG ER*FWF*RKDI*P
Subject    700  ST*GIRL*LYCS*W***PHI*SAAVRY*YVGPER*FWF*RKDI*P  834

Range 4: 816 to 890 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.8 bits(111) 0.0 25/25(100%) 0/25(0%) Plus/Plus
Query      117  T*RYLTKLLLIFVLSF*FKSRIVSF  191
                T*RYLTKLLLIFVLSF*FKSRIVSF
Subject    816  T*RYLTKLLLIFVLSF*FKSRIVSF  890

Range 5: 751 to 891 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
108.3 bits(230) 0.0 47/47(100%) 0/47(0%) Minus/Minus
Query       52  KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR  192
                KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR
Subject    751  KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR  891

Range 6: 701 to 889 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
86.3 bits(182) 0.0 62/63(98%) 0/63(0%) Minus/Minus
Query        2  KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQXXXXXXXRLPTKYEAXXXXXXXXXXX*SPKY  190
                KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQ+RRINI*RLPTKYEAIITTNYNITII*SPKY
Subject    701  KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQDRRINI*RLPTKYEAIITTNYNITII*SPKY  889

Grapevine leafroll associated virus 3, complete genome

Sequence ID: AF037268.2 Length: 17919 Number of Matches: 6

Range 1: 7918 to 8106 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
150.0 bits(321) 0.0 63/63(100%) 0/63(0%) Plus/Plus
Query        2  VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF  190
                VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF
Subject   7918  VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF  8106

Range 2: 7919 to 8107 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
134.4 bits(287) 0.0 59/63(94%) 0/63(0%) Minus/Minus
Query        3  KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*V  191
                KRDYPRLELKT*NKN EQLG* SLRQNQNYRSEPTYQY TAAD*I*GYHH *LQYNYNLIP*V
Subject   7919  KRDYPRLELKT*NKNMEQLG*KSLRQNQNYRSEPTYQYPTAAD*I*GYHHR*LQYNYNLIP*V  8107

Range 3: 7917 to 8051 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
81.3 bits(171) 0.0 41/45(91%) 0/45(0%) Plus/Plus
Query        1  ST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P  135
                ST*GIRL*LYCS* ***P+I*SAAV Y*YVGSER*FWF*RKD *P
Subject   7917  ST*GIRL*LYCS*R***PYI*SAAVGY*YVGSER*FWF*RKDF*P  8051

Range 4: 8033 to 8107 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 23/25(92%) 0/25(0%) Plus/Plus
Query      117  T*RYLTKLLLIFVLSF*FKSRIVSF  191
                T*R+LTKLL IFVLSF*FKSRIVSF
Subject   8033  T*RFLTKLLHIFVLSF*FKSRIVSF  8107

Range 5: 7968 to 8108 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.4 bits(215) 0.0 44/47(94%) 0/47(0%) Minus/Minus
Query       52  KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR  192
                KKRLSST*TKNLEQK GAAWL IFTSKPKLSLRTDVSISNGCRLN+R
Subject   7968  KKRLSST*TKNLEQKYGAAWLKIFTSKPKLSLRTDVSISNGCRLNIR  8108

Range 6: 7918 to 8106 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.0 bits(164) 0.0 58/63(92%) 0/63(0%) Minus/Minus
Query        2  KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQXXXXXXXRLPTKYEAXXXXXXXXXXX*SPKY  190
                KETILDLN*KLRTKI SSLVK LYVKTKIIAQNRRINI RLPTKY+AIIT NYNITII*SPKY
Subject   7918  KETILDLN*KLRTKIWSSLVKNLYVKTKIIAQNRRINIQRLPTKYKAIITANYNITII*SPKY  8106

Grapevine leafroll associated virus 3 isolate 621, complete genome

Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 6

Range 1: 8497 to 8685 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
150.0 bits(321) 0.0 63/63(100%) 0/63(0%) Plus/Plus
Query        2  VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF  190
                VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF
Subject   8497  VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF  8685

Range 2: 8498 to 8686 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
147.2 bits(315) 0.0 63/63(100%) 0/63(0%) Minus/Minus
Query        3  KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*V  191
                KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*V
Subject   8498  KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*V  8686

Range 3: 8496 to 8630 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
95.5 bits(202) 0.0 45/45(100%) 0/45(0%) Plus/Plus
Query        1  ST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P  135
                ST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P
Subject   8496  ST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P  8630

Range 4: 8612 to 8686 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.8 bits(111) 0.0 25/25(100%) 0/25(0%) Plus/Plus
Query      117  T*RYLTKLLLIFVLSF*FKSRIVSF  191
                T*RYLTKLLLIFVLSF*FKSRIVSF
Subject   8612  T*RYLTKLLLIFVLSF*FKSRIVSF  8686

Range 5: 8547 to 8687 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
108.3 bits(230) 0.0 47/47(100%) 0/47(0%) Minus/Minus
Query       52  KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR  192
                KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR
Subject   8547  KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR  8687

Range 6: 8497 to 8685 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
86.3 bits(182) 0.0 63/63(100%) 0/63(0%) Minus/Minus
Query        2  KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQXXXXXXXRLPTKYEAXXXXXXXXXXX*SPKY  190
                KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQNRRINI*RLPTKYEAIITTNYNITII*SPKY
Subject   8497  KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQNRRINI*RLPTKYEAIITTNYNITII*SPKY  8685

Nucleotide Sequence (104 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
104

Descriptions

Alignments

Grapevine leafroll associated virus 3 isolate 3138 07, complete genome

Sequence ID: JX559645.1 Length: 18498 Number of Matches: 6

Range 1: 11406 to 11507 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.9 bits(179) 0.0 34/34(100%) 0/34(0%) Minus/Minus
Query        2  LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIR  103
                LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIR
Subject  11406  LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIR  11507

Range 2: 11405 to 11506 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.0 bits(175) 0.0 34/34(100%) 0/34(0%) Minus/Minus
Query        1  STPPSTGIRCCVIALLLDKSSFIEDTNIPNLASD  102
                STPPSTGIRCCVIALLLDKSSFIEDTNIPNLASD
Subject  11405  STPPSTGIRCCVIALLLDKSSFIEDTNIPNLASD  11506

Range 3: 11407 to 11508 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.2 bits(173) 0.0 34/34(100%) 0/34(0%) Minus/Minus
Query        3  PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQ  104
                PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQ
Subject  11407  PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQ  11508

Range 4: 11405 to 11506 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
81.7 bits(172) 0.0 34/34(100%) 0/34(0%) Plus/Plus
Query        1  V*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGCG  102
                V*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGCG
Subject  11405  V*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGCG  11506

Range 5: 11407 to 11508 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.9 bits(168) 0.0 34/34(100%) 0/34(0%) Plus/Plus
Query        3  LMPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWR  104
                LMPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWR
Subject  11407  LMPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWR  11508

Range 6: 11406 to 11507 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.2 bits(169) 0.0 34/34(100%) 0/34(0%) Plus/Plus
Query        2  SDAKLGIFVSSMKEDLSNNNAITQHLIPVEGGVE  103
                SDAKLGIFVSSMKEDLSNNNAITQHLIPVEGGVE
Subject  11406  SDAKLGIFVSSMKEDLSNNNAITQHLIPVEGGVE  11507

Grapevine leafroll associated virus 3, complete genome

Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 6

Range 1: 10827 to 10928 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.9 bits(179) 0.0 34/34(100%) 0/34(0%) Minus/Minus
Query        2  LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIR  103
                LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIR
Subject  10827  LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIR  10928

Range 2: 10826 to 10927 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.0 bits(175) 0.0 34/34(100%) 0/34(0%) Minus/Minus
Query        1  STPPSTGIRCCVIALLLDKSSFIEDTNIPNLASD  102
                STPPSTGIRCCVIALLLDKSSFIEDTNIPNLASD
Subject  10826  STPPSTGIRCCVIALLLDKSSFIEDTNIPNLASD  10927

Range 3: 10828 to 10929 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.2 bits(173) 0.0 34/34(100%) 0/34(0%) Minus/Minus
Query        3  PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQ  104
                PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQ
Subject  10828  PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQ  10929

Range 4: 10826 to 10927 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
81.7 bits(172) 0.0 34/34(100%) 0/34(0%) Plus/Plus
Query        1  V*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGCG  102
                V*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGCG
Subject  10826  V*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGCG  10927

Range 5: 10828 to 10929 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.9 bits(168) 0.0 34/34(100%) 0/34(0%) Plus/Plus
Query        3  LMPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWR  104
                LMPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWR
Subject  10828  LMPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWR  10929

Range 6: 10827 to 10928 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.2 bits(169) 0.0 34/34(100%) 0/34(0%) Plus/Plus
Query        2  SDAKLGIFVSSMKEDLSNNNAITQHLIPVEGGVE  103
                SDAKLGIFVSSMKEDLSNNNAITQHLIPVEGGVE
Subject  10827  SDAKLGIFVSSMKEDLSNNNAITQHLIPVEGGVE  10928

Grapevine leafroll associated virus 3, complete genome

Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 6

Range 1: 11406 to 11507 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.9 bits(179) 0.0 34/34(100%) 0/34(0%) Minus/Minus
Query        2  LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIR  103
                LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIR
Subject  11406  LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIR  11507

Range 2: 11405 to 11506 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.0 bits(175) 0.0 34/34(100%) 0/34(0%) Minus/Minus
Query        1  STPPSTGIRCCVIALLLDKSSFIEDTNIPNLASD  102
                STPPSTGIRCCVIALLLDKSSFIEDTNIPNLASD
Subject  11405  STPPSTGIRCCVIALLLDKSSFIEDTNIPNLASD  11506

Range 3: 11407 to 11508 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.2 bits(173) 0.0 34/34(100%) 0/34(0%) Minus/Minus
Query        3  PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQ  104
                PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQ
Subject  11407  PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQ  11508

Range 4: 11405 to 11506 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
81.7 bits(172) 0.0 34/34(100%) 0/34(0%) Plus/Plus
Query        1  V*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGCG  102
                V*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGCG
Subject  11405  V*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGCG  11506

Range 5: 11407 to 11508 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.9 bits(168) 0.0 34/34(100%) 0/34(0%) Plus/Plus
Query        3  LMPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWR  104
                LMPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWR
Subject  11407  LMPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWR  11508

Range 6: 11406 to 11507 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.2 bits(169) 0.0 34/34(100%) 0/34(0%) Plus/Plus
Query        2  SDAKLGIFVSSMKEDLSNNNAITQHLIPVEGGVE  103
                SDAKLGIFVSSMKEDLSNNNAITQHLIPVEGGVE
Subject  11406  SDAKLGIFVSSMKEDLSNNNAITQHLIPVEGGVE  11507

Grapevine leafroll associated virus 3 isolate DA 68 heat shock protein 70 like protein (HSP70) gene, partial cds

Sequence ID: KP866976.1 Length: 1140 Number of Matches: 6

Range 1: 464 to 565 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.9 bits(179) 0.0 34/34(100%) 0/34(0%) Minus/Minus
Query        2  LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIR  103
                LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIR
Subject    464  LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIR  565

Range 2: 463 to 564 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.0 bits(175) 0.0 34/34(100%) 0/34(0%) Minus/Minus
Query        1  STPPSTGIRCCVIALLLDKSSFIEDTNIPNLASD  102
                STPPSTGIRCCVIALLLDKSSFIEDTNIPNLASD
Subject    463  STPPSTGIRCCVIALLLDKSSFIEDTNIPNLASD  564

Range 3: 465 to 566 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.2 bits(173) 0.0 34/34(100%) 0/34(0%) Minus/Minus
Query        3  PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQ  104
                PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQ
Subject    465  PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQ  566

Range 4: 463 to 564 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
81.7 bits(172) 0.0 34/34(100%) 0/34(0%) Plus/Plus
Query        1  V*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGCG  102
                V*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGCG
Subject    463  V*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGCG  564

Range 5: 465 to 566 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.9 bits(168) 0.0 34/34(100%) 0/34(0%) Plus/Plus
Query        3  LMPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWR  104
                LMPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWR
Subject    465  LMPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWR  566

Range 6: 464 to 565 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.2 bits(169) 0.0 34/34(100%) 0/34(0%) Plus/Plus
Query        2  SDAKLGIFVSSMKEDLSNNNAITQHLIPVEGGVE  103
                SDAKLGIFVSSMKEDLSNNNAITQHLIPVEGGVE
Subject    464  SDAKLGIFVSSMKEDLSNNNAITQHLIPVEGGVE  565

Grapevine leafroll associated virus 3 isolate DA 69 heat shock protein 70 like protein (HSP70) gene, partial cds

Sequence ID: KP866977.1 Length: 1140 Number of Matches: 6

Range 1: 464 to 565 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.9 bits(179) 0.0 34/34(100%) 0/34(0%) Minus/Minus
Query        2  LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIR  103
                LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIR
Subject    464  LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIR  565

Range 2: 463 to 564 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.0 bits(175) 0.0 34/34(100%) 0/34(0%) Minus/Minus
Query        1  STPPSTGIRCCVIALLLDKSSFIEDTNIPNLASD  102
                STPPSTGIRCCVIALLLDKSSFIEDTNIPNLASD
Subject    463  STPPSTGIRCCVIALLLDKSSFIEDTNIPNLASD  564

Range 3: 465 to 566 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.2 bits(173) 0.0 34/34(100%) 0/34(0%) Minus/Minus
Query        3  PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQ  104
                PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQ
Subject    465  PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQ  566

Range 4: 463 to 564 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
81.7 bits(172) 0.0 34/34(100%) 0/34(0%) Plus/Plus
Query        1  V*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGCG  102
                V*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGCG
Subject    463  V*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGCG  564

Range 5: 465 to 566 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.9 bits(168) 0.0 34/34(100%) 0/34(0%) Plus/Plus
Query        3  LMPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWR  104
                LMPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWR
Subject    465  LMPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWR  566

Range 6: 464 to 565 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.2 bits(169) 0.0 34/34(100%) 0/34(0%) Plus/Plus
Query        2  SDAKLGIFVSSMKEDLSNNNAITQHLIPVEGGVE  103
                SDAKLGIFVSSMKEDLSNNNAITQHLIPVEGGVE
Subject    464  SDAKLGIFVSSMKEDLSNNNAITQHLIPVEGGVE  565

Nucleotide Sequence (355 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
36
72
108
144
180
216
252
288
324
355

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
266.8 1473.5 34% 7.812e-70 92% JX559645.1
266.8 1473.5 34% 7.812e-70 92% GU983863.1
265.5 1465.7 34% 2.026e-69 91% KX756669.1
265.3 1456.5 34% 2.201e-69 91% GQ352631.1
264.1 1452.0 34% 5.253e-69 90% NC_004667.1

Alignments

Grapevine leafroll associated virus 3 isolate 3138 07, complete genome

Sequence ID: JX559645.1 Length: 18498 Number of Matches: 6

Range 1: 11788 to 12141 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
266.8 bits(576) 0.0 108/118(92%) 0/118(0%) Minus/Plus
Query        1  WTL*RIR*RTGWWIFSRW*FSRRVVQYPVHILIDAQWVVGMWYSVYLKGRITGLF*MNRRAGAYRNVGETQWRPTWRSLISPRTDRCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE  354
                WTL*RIR*RT  WIFSRW*FSR+VVQYPVHILID QWVV MWY+VYLKGRIT LF*MNRR+GAYRNVGETQ RPTWRSLISPRT+RCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE
Subject  11788  WTL*RIR*RTR*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE  12141

Range 2: 11787 to 12140 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
265.9 bits(574) 0.0 109/118(92%) 0/118(0%) Plus/Minus
Query        2  SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLHWVSPTFRYAPARRFI*KSPVILPFKYTEYHIPTTHCASMSI*TGYWTTLRENYHRLKIHHPVR*RIR*SVH  355
                SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGL+WVSPTFRYAP RRFI*KS VILPFKYT YHI TTHC SMSI*TGYWTT RENYHRLKIH+ VR*RIR*SVH
Subject  11787  SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVH  12140

Range 3: 11787 to 12140 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
265.3 bits(575) 0.0 111/118(94%) 0/118(0%) Minus/Plus
Query        2  VDTLANTLTDGVVDFQPVVIFPKGSPIPCSYTHRCTVGGGDVVFGIFEGENNRAFLNEPTCRGVSKRRGDPVEADVAQFNLSTDGSVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR  355
                VDTL NTLTD VVDFQPVVIFPKGSPIPCSYTHR TVGGGDVV+GIFEGENNRAFLNEPT RGVSKRRGDPVE DVAQFNLSTDG+VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR
Subject  11787  VDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR  12140

Range 4: 11788 to 12141 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
245.3 bits(529) 0.0 111/118(94%) 0/118(0%) Plus/Minus
Query        1  LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPIRPWRD*TAPRRPPLGLPYVSIRPGTSVHLEKPCYSPLQIYRIPHPHHPLCIYEYMNRVLDYPSGKLXXXXXXXXXXLAYSLKCP  354
                LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTP RPWRD*TAPRR  LGLPYVSIRPGTSVHLEK CYSPLQIYRIPH HHPLCIYEYMNRVLDY SGKLPPAENP PRPLAYSLKCP
Subject  11788  LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCP  12141

Range 5: 11789 to 12139 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
215.1 bits(463) 0.0 110/117(94%) 0/117(0%) Plus/Minus
Query        3  LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTDPSVERLNCATSASTGSPLRFDTPRHVGSFRKALLFXXXXXXXXXXXXXXVHL*VYEQGIGLPFGKITTG*KSTTPSVSVFAKVS  353
                LPDL*TNESSTFVVPGTRYSFFTSSPLTITDT PSVERLNCATS STGSPLRFDTPR+VGSFRKALLFSPSNIP TTSPPPTV+L*VYEQGIGLPFGKITTG*KSTT SVSVF KVS
Subject  11789  LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKITTG*KSTTSSVSVFVKVS  12139

Range 6: 11789 to 12139 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
215.1 bits(463) 0.0 108/117(92%) 0/117(0%) Minus/Plus
Query        3  GHFSEYXXXXXXXXXXXXXFPEG*SNTLFIYS*MHSGWWGCGIRYI*RGE*QGFSK*TDVPGRIET*GRPSGGRRGAV*SLHGRIGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE  353
                GHF+EYANGRG GFSAGGNFPE *SNTLFIYS*+HSGWW CGIRYI*RGE*Q FSK*TDVPGRIET*GRPS  RRGAV*SLHGR GVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE
Subject  11789  GHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE  12139

Grapevine leafroll associated virus 3 isolate WA MR, complete genome

Sequence ID: GU983863.1 Length: 18498 Number of Matches: 6

Range 1: 11788 to 12141 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
266.8 bits(576) 0.0 108/118(92%) 0/118(0%) Minus/Plus
Query        1  WTL*RIR*RTGWWIFSRW*FSRRVVQYPVHILIDAQWVVGMWYSVYLKGRITGLF*MNRRAGAYRNVGETQWRPTWRSLISPRTDRCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE  354
                WTL*RIR*RT  WIFSRW*FSR+VVQYPVHILID QWVV MWY+VYLKGRIT LF*MNRR+GAYRNVGETQ RPTWRSLISPRT+RCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE
Subject  11788  WTL*RIR*RTR*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE  12141

Range 2: 11787 to 12140 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
265.9 bits(574) 0.0 109/118(92%) 0/118(0%) Plus/Minus
Query        2  SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLHWVSPTFRYAPARRFI*KSPVILPFKYTEYHIPTTHCASMSI*TGYWTTLRENYHRLKIHHPVR*RIR*SVH  355
                SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGL+WVSPTFRYAP RRFI*KS VILPFKYT YHI TTHC SMSI*TGYWTT RENYHRLKIH+ VR*RIR*SVH
Subject  11787  SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVH  12140

Range 3: 11787 to 12140 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
265.3 bits(575) 0.0 111/118(94%) 0/118(0%) Minus/Plus
Query        2  VDTLANTLTDGVVDFQPVVIFPKGSPIPCSYTHRCTVGGGDVVFGIFEGENNRAFLNEPTCRGVSKRRGDPVEADVAQFNLSTDGSVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR  355
                VDTL NTLTD VVDFQPVVIFPKGSPIPCSYTHR TVGGGDVV+GIFEGENNRAFLNEPT RGVSKRRGDPVE DVAQFNLSTDG+VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR
Subject  11787  VDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR  12140

Range 4: 11788 to 12141 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
245.3 bits(529) 0.0 111/118(94%) 0/118(0%) Plus/Minus
Query        1  LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPIRPWRD*TAPRRPPLGLPYVSIRPGTSVHLEKPCYSPLQIYRIPHPHHPLCIYEYMNRVLDYPSGKLXXXXXXXXXXLAYSLKCP  354
                LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTP RPWRD*TAPRR  LGLPYVSIRPGTSVHLEK CYSPLQIYRIPH HHPLCIYEYMNRVLDY SGKLPPAENP PRPLAYSLKCP
Subject  11788  LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCP  12141

Range 5: 11789 to 12139 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
215.1 bits(463) 0.0 110/117(94%) 0/117(0%) Plus/Minus
Query        3  LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTDPSVERLNCATSASTGSPLRFDTPRHVGSFRKALLFXXXXXXXXXXXXXXVHL*VYEQGIGLPFGKITTG*KSTTPSVSVFAKVS  353
                LPDL*TNESSTFVVPGTRYSFFTSSPLTITDT PSVERLNCATS STGSPLRFDTPR+VGSFRKALLFSPSNIP TTSPPPTV+L*VYEQGIGLPFGKITTG*KSTT SVSVF KVS
Subject  11789  LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKITTG*KSTTSSVSVFVKVS  12139

Range 6: 11789 to 12139 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
215.1 bits(463) 0.0 108/117(92%) 0/117(0%) Minus/Plus
Query        3  GHFSEYXXXXXXXXXXXXXFPEG*SNTLFIYS*MHSGWWGCGIRYI*RGE*QGFSK*TDVPGRIET*GRPSGGRRGAV*SLHGRIGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE  353
                GHF+EYANGRG GFSAGGNFPE *SNTLFIYS*+HSGWW CGIRYI*RGE*Q FSK*TDVPGRIET*GRPS  RRGAV*SLHGR GVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE
Subject  11789  GHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE  12139

Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome

Sequence ID: KX756669.1 Length: 18313 Number of Matches: 6

Range 1: 11603 to 11956 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
265.5 bits(573) 0.0 107/118(91%) 0/118(0%) Minus/Plus
Query        1  WTL*RIR*RTGWWIFSRW*FSRRVVQYPVHILIDAQWVVGMWYSVYLKGRITGLF*MNRRAGAYRNVGETQWRPTWRSLISPRTDRCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE  354
                WTL*RIR*RT  WIFSRW*FSR+VVQYPVHILID QWVV MWY+VYLKGRIT LF*MNRR+GAYRNVGETQ RPTWRSLISPRT+RCLLSLMVRK*+MNIWYPGQQTYWIHWSINLGE
Subject  11603  WTL*RIR*RTR*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*KMNIWYPGQQTYWIHWSINLGE  11956

Range 2: 11602 to 11955 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
265.3 bits(575) 0.0 111/118(94%) 0/118(0%) Minus/Plus
Query        2  VDTLANTLTDGVVDFQPVVIFPKGSPIPCSYTHRCTVGGGDVVFGIFEGENNRAFLNEPTCRGVSKRRGDPVEADVAQFNLSTDGSVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR  355
                VDTL NTLTD VVDFQPVVIFPKGSPIPCSYTHR TVGGGDVV+GIFEGENNRAFLNEPT RGVSKRRGDPVE DVAQFNLSTDG+VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR
Subject  11602  VDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR  11955

Range 3: 11602 to 11955 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
264.1 bits(570) 0.0 108/118(92%) 0/118(0%) Plus/Minus
Query        2  SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLHWVSPTFRYAPARRFI*KSPVILPFKYTEYHIPTTHCASMSI*TGYWTTLRENYHRLKIHHPVR*RIR*SVH  355
                SPRFIDQ*IQYVCCPGYQIFI YFLTINDNRHRSVRGEIKLRHVGL+WVSPTFRYAP RRFI*KS VILPFKYT YHI TTHC SMSI*TGYWTT RENYHRLKIH+ VR*RIR*SVH
Subject  11602  SPRFIDQ*IQYVCCPGYQIFIFYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVH  11955

Range 4: 11603 to 11956 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
242.5 bits(523) 0.0 110/118(93%) 0/118(0%) Plus/Minus
Query        1  LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPIRPWRD*TAPRRPPLGLPYVSIRPGTSVHLEKPCYSPLQIYRIPHPHHPLCIYEYMNRVLDYPSGKLXXXXXXXXXXLAYSLKCP  354
                LSQIYRPMNPVRLLSRVPDIH LLPHH*R*QTP RPWRD*TAPRR  LGLPYVSIRPGTSVHLEK CYSPLQIYRIPH HHPLCIYEYMNRVLDY SGKLPPAENP PRPLAYSLKCP
Subject  11603  LSQIYRPMNPVRLLSRVPDIHFLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCP  11956

Range 5: 11604 to 11954 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
215.1 bits(463) 0.0 110/117(94%) 0/117(0%) Plus/Minus
Query        3  LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTDPSVERLNCATSASTGSPLRFDTPRHVGSFRKALLFXXXXXXXXXXXXXXVHL*VYEQGIGLPFGKITTG*KSTTPSVSVFAKVS  353
                LPDL*TNESSTFVVPGTRYSFFTSSPLTITDT PSVERLNCATS STGSPLRFDTPR+VGSFRKALLFSPSNIP TTSPPPTV+L*VYEQGIGLPFGKITTG*KSTT SVSVF KVS
Subject  11604  LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKITTG*KSTTSSVSVFVKVS  11954

Range 6: 11604 to 11954 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
213.2 bits(459) 0.0 107/117(91%) 0/117(0%) Minus/Plus
Query        3  GHFSEYXXXXXXXXXXXXXFPEG*SNTLFIYS*MHSGWWGCGIRYI*RGE*QGFSK*TDVPGRIET*GRPSGGRRGAV*SLHGRIGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE  353
                GHF+EYANGRG GFSAGGNFPE *SNTLFIYS*+HSGWW CGIRYI*RGE*Q FSK*TDVPGRIET*GRPS  RRGAV*SLHGR GVCYR*W*GSK+*ISGTRDNKRTGFIGL*IWE
Subject  11604  GHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKK*ISGTRDNKRTGFIGL*IWE  11954

Grapevine leafroll associated virus 3 isolate 621, complete genome

Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 6

Range 1: 11787 to 12140 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
265.3 bits(575) 0.0 111/118(94%) 0/118(0%) Minus/Plus
Query        2  VDTLANTLTDGVVDFQPVVIFPKGSPIPCSYTHRCTVGGGDVVFGIFEGENNRAFLNEPTCRGVSKRRGDPVEADVAQFNLSTDGSVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR  355
                VDTL NTLTD VVDFQPVVIFPKGSPIPCSYTHR TVGGGDVV+GIFEGENNRAFLNEPT RGVSKRRGDPVE DVAQFNLSTDG+VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR
Subject  11787  VDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR  12140

Range 2: 11787 to 12140 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
263.2 bits(568) 0.0 108/118(92%) 0/118(0%) Plus/Minus
Query        2  SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLHWVSPTFRYAPARRFI*KSPVILPFKYTEYHIPTTHCASMSI*TGYWTTLRENYHRLKIHHPVR*RIR*SVH  355
                SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGL+WVSPTFRYAP RRFI*KS VILPFKYT Y+I TTHC SMSI*TGYWTT RENYHRLKIH+ VR*RIR*SVH
Subject  11787  SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYYISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVH  12140

Range 3: 11788 to 12141 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
260.0 bits(561) 0.0 107/118(91%) 0/118(0%) Minus/Plus
Query        1  WTL*RIR*RTGWWIFSRW*FSRRVVQYPVHILIDAQWVVGMWYSVYLKGRITGLF*MNRRAGAYRNVGETQWRPTWRSLISPRTDRCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE  354
                WTL*RIR*RT  WIFSRW*FSR+VVQYPVHILID QWVV M Y+VYLKGRIT LF*MNRR+GAYRNVGETQ RPTWRSLISPRT+RCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE
Subject  11788  WTL*RIR*RTR*WIFSRW*FSRKVVQYPVHILIDTQWVVEM*YTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE  12141

Range 4: 11788 to 12141 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
240.7 bits(519) 0.0 110/118(93%) 0/118(0%) Plus/Minus
Query        1  LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPIRPWRD*TAPRRPPLGLPYVSIRPGTSVHLEKPCYSPLQIYRIPHPHHPLCIYEYMNRVLDYPSGKLXXXXXXXXXXLAYSLKCP  354
                LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTP RPWRD*TAPRR  LGLPYVSIRPGTSVHLEK CYSPLQIYRI H HHPLCIYEYMNRVLDY SGKLPPAENP PRPLAYSLKCP
Subject  11788  LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRILHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCP  12141

Range 5: 11789 to 12139 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
215.1 bits(463) 0.0 110/117(94%) 0/117(0%) Plus/Minus
Query        3  LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTDPSVERLNCATSASTGSPLRFDTPRHVGSFRKALLFXXXXXXXXXXXXXXVHL*VYEQGIGLPFGKITTG*KSTTPSVSVFAKVS  353
                LPDL*TNESSTFVVPGTRYSFFTSSPLTITDT PSVERLNCATS STGSPLRFDTPR+VGSFRKALLFSPSNIP TTSPPPTV+L*VYEQGIGLPFGKITTG*KSTT SVSVF KVS
Subject  11789  LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKITTG*KSTTSSVSVFVKVS  12139

Range 6: 11789 to 12139 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
212.3 bits(457) 0.0 107/117(91%) 0/117(0%) Minus/Plus
Query        3  GHFSEYXXXXXXXXXXXXXFPEG*SNTLFIYS*MHSGWWGCGIRYI*RGE*QGFSK*TDVPGRIET*GRPSGGRRGAV*SLHGRIGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE  353
                GHF+EYANGRG GFSAGGNFPE *SNTLFIYS*+HSGWW C IRYI*RGE*Q FSK*TDVPGRIET*GRPS  RRGAV*SLHGR GVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE
Subject  11789  GHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCSIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE  12139

Grapevine leafroll associated virus 3, complete genome

Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 6

Range 1: 11209 to 11562 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
264.1 bits(570) 0.0 106/118(90%) 0/118(0%) Minus/Plus
Query        1  WTL*RIR*RTGWWIFSRW*FSRRVVQYPVHILIDAQWVVGMWYSVYLKGRITGLF*MNRRAGAYRNVGETQWRPTWRSLISPRTDRCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE  354
                WTL*RIR*RT  W+FSRW*FSR+VVQYPVHILID QWVV MWY+VYLKGRIT LF*M+RR+GAYRNVGETQ RPTWRSLISPRT+RCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE
Subject  11209  WTL*RIR*RTR*WVFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MSRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE  11562

Range 2: 11208 to 11561 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
260.9 bits(563) 0.0 107/118(91%) 0/118(0%) Plus/Minus
Query        2  SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLHWVSPTFRYAPARRFI*KSPVILPFKYTEYHIPTTHCASMSI*TGYWTTLRENYHRLKIHHPVR*RIR*SVH  355
                SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGL+WVSPTFRYAP RR I*KS VILPFKYT YHI TTHC SMSI*TGYWTT RENYHRLK H+ VR*RIR*SVH
Subject  11208  SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRLI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKTHYLVR*RIR*SVH  11561

Range 3: 11208 to 11561 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
259.4 bits(562) 0.0 109/118(92%) 0/118(0%) Minus/Plus
Query        2  VDTLANTLTDGVVDFQPVVIFPKGSPIPCSYTHRCTVGGGDVVFGIFEGENNRAFLNEPTCRGVSKRRGDPVEADVAQFNLSTDGSVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR  355
                VDTL NTLTD VV  QPVVIFPKGSPIPCSYTHR TVGGGDVV+GIFEGENNRAFLNEPT RGVSKRRGDPVE DVAQFNLSTDG+VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR
Subject  11208  VDTLTNTLTDEVVGLQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR  11561

Range 4: 11209 to 11562 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
243.5 bits(525) 0.0 109/118(92%) 0/118(0%) Plus/Minus
Query        1  LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPIRPWRD*TAPRRPPLGLPYVSIRPGTSVHLEKPCYSPLQIYRIPHPHHPLCIYEYMNRVLDYPSGKLXXXXXXXXXXLAYSLKCP  354
                LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTP RPWRD*TAPRR  LGLPYVSIRPGTS HLEK CYSPLQIYRIPH HHPLCIYEYMNRVLDY SGKLPPAE+P PRPLAYSLKCP
Subject  11209  LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSAHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAEDPLPRPLAYSLKCP  11562

Range 5: 11210 to 11560 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
212.8 bits(458) 0.0 106/117(91%) 0/117(0%) Minus/Plus
Query        3  GHFSEYXXXXXXXXXXXXXFPEG*SNTLFIYS*MHSGWWGCGIRYI*RGE*QGFSK*TDVPGRIET*GRPSGGRRGAV*SLHGRIGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE  353
                GHF+EYANGRG G SAGGNFPE *SNTLFIYS*+HSGWW CGIRYI*RGE*Q FSK* DVPGRIET*GRPS  RRGAV*SLHGR GVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE
Subject  11210  GHFNEYANGRGSGSSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*ADVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE  11560

Range 6: 11210 to 11560 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
211.4 bits(455) 0.0 108/117(92%) 0/117(0%) Plus/Minus
Query        3  LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTDPSVERLNCATSASTGSPLRFDTPRHVGSFRKALLFXXXXXXXXXXXXXXVHL*VYEQGIGLPFGKITTG*KSTTPSVSVFAKVS  353
                LPDL*TNESSTFVVPGTRYSFFTSSPLTITDT PSVERLNCATS STGSPLRFDTPR+VGSFRKALLFSPSNIP TTSPPPTV+L*VYEQGIGLPFGKITTG*+ TT SVSVF KVS
Subject  11210  LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKITTG*RPTTSSVSVFVKVS  11560

Nucleotide Sequence (316 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
32
64
96
128
160
192
224
256
288
316

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
246.7 1165.4 38% 7.456e-64 92% KC731554.1
246.7 1165.4 38% 7.456e-64 92% KM058745.1
166.9 475.8 34% 7.467e-40 48% JX559645.1
166.9 425.8 34% 7.467e-40 39% JQ423939.1
166.9 481.3 34% 7.467e-40 50% KJ174518.1

Alignments

Grapevine leafroll associated virus 3 isolate GL3.GTG10 HSP70 mRNA, partial cds

Sequence ID: KC731554.1 Length: 517 Number of Matches: 10

Range 1: 179 to 493 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
246.7 bits(532) 0.0 103/105(98%) 0/105(0%) Minus/Minus
Query        1  NTSNRYAKSLKRLNDETALEGVVISGHRNNSG*DRR*RLSLTLQNQGP*KETYNINNPQKCIWSGTQTPHK*SAPAIELYRVSWFQFFNVTF*VIPRNSYPSLWV  315
                + SNRYAKSLKRLNDETALEGVVISGHRNNSG*DRR*RLSLTLQNQGP*KETYNINNPQKCIWSGTQTPHK*SAPAIELYRVSWFQFFNVTF*VIPRNSYPSLWV
Subject    179  DASNRYAKSLKRLNDETALEGVVISGHRNNSG*DRR*RLSLTLQNQGP*KETYNINNPQKCIWSGTQTPHK*SAPAIELYRVSWFQFFNVTF*VIPRNSYPSLWV  493

Range 2: 180 to 488 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
240.3 bits(518) 0.0 103/103(100%) 0/103(0%) Plus/Plus
Query        2  TQRDG*ELRGIT*NVTLKN*NQLTR*SSIAGALYLWGVWVPDQIHF*GLLILYVSF*GPWFWSVRDKRHLRSQPLLLRCPLITTPSSAVSSFKRLRDLAYRLE  310
                TQRDG*ELRGIT*NVTLKN*NQLTR*SSIAGALYLWGVWVPDQIHF*GLLILYVSF*GPWFWSVRDKRHLRSQPLLLRCPLITTPSSAVSSFKRLRDLAYRLE
Subject    180  TQRDG*ELRGIT*NVTLKN*NQLTR*SSIAGALYLWGVWVPDQIHF*GLLILYVSF*GPWFWSVRDKRHLRSQPLLLRCPLITTPSSAVSSFKRLRDLAYRLE  488

Range 3: 179 to 493 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
176.6 bits(379) 0.0 105/105(100%) 0/105(0%) Plus/Plus
Query        1  NPKRWVGVTRDNLERYVEKLKPTYTIKFDXXXXXXXXXXXXXPDTLLRVVDIICLFLRALVLECERQXXXXXXXXXXXXXXDYNSFKRSFVVQALKGLGIPVRGV  315
                NPKRWVGVTRDNLERYVEKLKPTYTIKFDSGGALLMGGLGSGPDTLLRVVDIICLFLRALVLECERQTSSTVSAAVVTVPADYNSFKRSFVVQALKGLGIPVRGV
Subject    179  NPKRWVGVTRDNLERYVEKLKPTYTIKFDSGGALLMGGLGSGPDTLLRVVDIICLFLRALVLECERQTSSTVSAAVVTVPADYNSFKRSFVVQALKGLGIPVRGV  493

Range 4: 181 to 492 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
166.9 bits(358) 0.0 104/104(100%) 0/104(0%) Minus/Minus
Query        3  TPLTGMPSPLSA*TTKLRLKEL*SAGXXXXXXXXXXXVCLSHSKTRALKKRHIISTTLRSVSGXXXXXXXXXXXPLSNFIV*VGFNFST*RSKLSLVTPTHLFG  314
                TPLTGMPSPLSA*TTKLRLKEL*SAGTVTTAAETVDDVCLSHSKTRALKKRHIISTTLRSVSGPEPKPPISKAPPLSNFIV*VGFNFST*RSKLSLVTPTHLFG
Subject    181  TPLTGMPSPLSA*TTKLRLKEL*SAGTVTTAAETVDDVCLSHSKTRALKKRHIISTTLRSVSGPEPKPPISKAPPLSNFIV*VGFNFST*RSKLSLVTPTHLFG  492

Range 5: 316 to 414 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
85.4 bits(180) 0.0 33/33(100%) 0/33(0%) Plus/Plus
Query      138  SEGC*YYMSLFKGPGFGV*ETNVIYGLSRCCYG  236
                SEGC*YYMSLFKGPGFGV*ETNVIYGLSRCCYG
Subject    316  SEGC*YYMSLFKGPGFGV*ETNVIYGLSRCCYG  414

Range 6: 181 to 261 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.4 bits(132) 0.0 27/27(100%) 0/27(0%) Plus/Plus
Query        3  PKEMGRSYEG*LRTLR*KIETNLHDKV  83
                PKEMGRSYEG*LRTLR*KIETNLHDKV
Subject    181  PKEMGRSYEG*LRTLR*KIETNLHDKV  261

Range 7: 454 to 489 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.4 bits(60) 0.0 12/12(100%) 0/12(0%) Plus/Plus
Query      276  SSA*GTWHTG*R  311
                SSA*GTWHTG*R
Subject    454  SSA*GTWHTG*R  489

Range 8: 306 to 386 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.0 bits(142) 0.0 27/27(100%) 0/27(0%) Minus/Minus
Query      128  MTFVSHTPKPGPLKRDI*YQQPSEVYL  208
                MTFVSHTPKPGPLKRDI*YQQPSEVYL
Subject    306  MTFVSHTPKPGPLKRDI*YQQPSEVYL  386

Range 9: 423 to 494 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.3 bits(110) 0.0 22/24(92%) 0/24(0%) Minus/Minus
Query      245  QHL*PVCQVP*ALERRNCA*RSCN  316
                + L*PVCQVP*ALERRNCA*RSCN
Subject    423  RRL*PVCQVP*ALERRNCA*RSCN  494

Range 10: 219 to 260 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.5 bits(69) 0.0 14/14(100%) 0/14(0%) Minus/Minus
Query       41  TLSCKLVSIFQRNV  82
                TLSCKLVSIFQRNV
Subject    219  TLSCKLVSIFQRNV  260

Grapevine leafroll associated virus 3 isolate GH24, complete genome

Sequence ID: KM058745.1 Length: 18493 Number of Matches: 10

Range 1: 10863 to 11177 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
246.7 bits(532) 0.0 103/105(98%) 0/105(0%) Minus/Minus
Query        1  NTSNRYAKSLKRLNDETALEGVVISGHRNNSG*DRR*RLSLTLQNQGP*KETYNINNPQKCIWSGTQTPHK*SAPAIELYRVSWFQFFNVTF*VIPRNSYPSLWV  315
                + SNRYAKSLKRLNDETALEGVVISGHRNNSG*DRR*RLSLTLQNQGP*KETYNINNPQKCIWSGTQTPHK*SAPAIELYRVSWFQFFNVTF*VIPRNSYPSLWV
Subject  10863  DASNRYAKSLKRLNDETALEGVVISGHRNNSG*DRR*RLSLTLQNQGP*KETYNINNPQKCIWSGTQTPHK*SAPAIELYRVSWFQFFNVTF*VIPRNSYPSLWV  11177

Range 2: 10864 to 11172 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
240.3 bits(518) 0.0 103/103(100%) 0/103(0%) Plus/Plus
Query        2  TQRDG*ELRGIT*NVTLKN*NQLTR*SSIAGALYLWGVWVPDQIHF*GLLILYVSF*GPWFWSVRDKRHLRSQPLLLRCPLITTPSSAVSSFKRLRDLAYRLE  310
                TQRDG*ELRGIT*NVTLKN*NQLTR*SSIAGALYLWGVWVPDQIHF*GLLILYVSF*GPWFWSVRDKRHLRSQPLLLRCPLITTPSSAVSSFKRLRDLAYRLE
Subject  10864  TQRDG*ELRGIT*NVTLKN*NQLTR*SSIAGALYLWGVWVPDQIHF*GLLILYVSF*GPWFWSVRDKRHLRSQPLLLRCPLITTPSSAVSSFKRLRDLAYRLE  11172

Range 3: 10863 to 11177 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
176.6 bits(379) 0.0 105/105(100%) 0/105(0%) Plus/Plus
Query        1  NPKRWVGVTRDNLERYVEKLKPTYTIKFDXXXXXXXXXXXXXPDTLLRVVDIICLFLRALVLECERQXXXXXXXXXXXXXXDYNSFKRSFVVQALKGLGIPVRGV  315
                NPKRWVGVTRDNLERYVEKLKPTYTIKFDSGGALLMGGLGSGPDTLLRVVDIICLFLRALVLECERQTSSTVSAAVVTVPADYNSFKRSFVVQALKGLGIPVRGV
Subject  10863  NPKRWVGVTRDNLERYVEKLKPTYTIKFDSGGALLMGGLGSGPDTLLRVVDIICLFLRALVLECERQTSSTVSAAVVTVPADYNSFKRSFVVQALKGLGIPVRGV  11177

Range 4: 10865 to 11176 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
166.9 bits(358) 0.0 104/104(100%) 0/104(0%) Minus/Minus
Query        3  TPLTGMPSPLSA*TTKLRLKEL*SAGXXXXXXXXXXXVCLSHSKTRALKKRHIISTTLRSVSGXXXXXXXXXXXPLSNFIV*VGFNFST*RSKLSLVTPTHLFG  314
                TPLTGMPSPLSA*TTKLRLKEL*SAGTVTTAAETVDDVCLSHSKTRALKKRHIISTTLRSVSGPEPKPPISKAPPLSNFIV*VGFNFST*RSKLSLVTPTHLFG
Subject  10865  TPLTGMPSPLSA*TTKLRLKEL*SAGTVTTAAETVDDVCLSHSKTRALKKRHIISTTLRSVSGPEPKPPISKAPPLSNFIV*VGFNFST*RSKLSLVTPTHLFG  11176

Range 5: 11000 to 11098 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
85.4 bits(180) 0.0 33/33(100%) 0/33(0%) Plus/Plus
Query      138  SEGC*YYMSLFKGPGFGV*ETNVIYGLSRCCYG  236
                SEGC*YYMSLFKGPGFGV*ETNVIYGLSRCCYG
Subject  11000  SEGC*YYMSLFKGPGFGV*ETNVIYGLSRCCYG  11098

Range 6: 10865 to 10945 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.4 bits(132) 0.0 27/27(100%) 0/27(0%) Plus/Plus
Query        3  PKEMGRSYEG*LRTLR*KIETNLHDKV  83
                PKEMGRSYEG*LRTLR*KIETNLHDKV
Subject  10865  PKEMGRSYEG*LRTLR*KIETNLHDKV  10945

Range 7: 11138 to 11173 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.4 bits(60) 0.0 12/12(100%) 0/12(0%) Plus/Plus
Query      276  SSA*GTWHTG*R  311
                SSA*GTWHTG*R
Subject  11138  SSA*GTWHTG*R  11173

Range 8: 10990 to 11070 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.0 bits(142) 0.0 27/27(100%) 0/27(0%) Minus/Minus
Query      128  MTFVSHTPKPGPLKRDI*YQQPSEVYL  208
                MTFVSHTPKPGPLKRDI*YQQPSEVYL
Subject  10990  MTFVSHTPKPGPLKRDI*YQQPSEVYL  11070

Range 9: 11107 to 11178 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.3 bits(110) 0.0 22/24(92%) 0/24(0%) Minus/Minus
Query      245  QHL*PVCQVP*ALERRNCA*RSCN  316
                + L*PVCQVP*ALERRNCA*RSCN
Subject  11107  RRL*PVCQVP*ALERRNCA*RSCN  11178

Range 10: 10903 to 10944 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.5 bits(69) 0.0 14/14(100%) 0/14(0%) Minus/Minus
Query       41  TLSCKLVSIFQRNV  82
                TLSCKLVSIFQRNV
Subject  10903  TLSCKLVSIFQRNV  10944

Grapevine leafroll associated virus 3 isolate 3138 07, complete genome

Sequence ID: JX559645.1 Length: 18498 Number of Matches: 4

Range 1: 10863 to 11177 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
166.9 bits(358) 0.0 95/105(90%) 0/105(0%) Plus/Plus
Query        1  NPKRWVGVTRDNLERYVEKLKPTYTIKFDXXXXXXXXXXXXXPDTLLRVVDIICLFLRALVLECERQXXXXXXXXXXXXXXDYNSFKRSFVVQALKGLGIPVRGV  315
                NPKRWVGVTRDN+ERYVEKLKPTYT+K DSGGALL+GGLGSGPDTLLRVVD+ICLFLRAL+LECER TS+TV+AAVVTVPADYNSFKRSFVV+ALKGLGIPVRGV
Subject  10863  NPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGV  11177

Range 2: 10865 to 11176 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
125.7 bits(268) 0.0 84/104(81%) 0/104(0%) Minus/Minus
Query        3  TPLTGMPSPLSA*TTKLRLKEL*SAGXXXXXXXXXXXVCLSHSKTRALKKRHIISTTLRSVSGXXXXXXXXXXXPLSNFIV*VGFNFST*RSKLSLVTPTHLFG  314
                TPLTG+P P SA TTKLRLKEL*SAGTVTTAA TV DV LSHS  +ALK +HI STTL  VSGPEPKPPI+KAPPLS F V VGFNFST*RS LSLVTPTHLFG
Subject  10865  TPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFG  11176

Range 3: 10875 to 11177 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.9 bits(227) 0.0 50/101(50%) 0/101(0%) Minus/Minus
Query       13  NTSNRYAKSLKRLNDETALEGVVISGHRNNSG*DRR*RLSLTLQNQGP*KETYNINNPQKCIWSGTQTPHK*SAPAIELYRVSWFQFFNVTF*VIPRNSYP  315
                NTSNRY K+  RLN+E + +GV++S +R NS  +RR R+   LQ QG  + TY +N+PQ  +WSGT T + * A A+ L+ V  F F +VTF VIPR++YP
Subject  10875  NTSNRYTKTF*RLNNEASFKGVIVSWYRYNSCCNRRRRIPFALQYQGSQE*TYYVNDPQ*GVWSGT*TSN**GASAVYLHGVCRF*FLDVTFDVIPRHTYP  11177

Range 4: 10864 to 11178 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.2 bits(160) 0.0 50/105(48%) 0/105(0%) Plus/Plus
Query        2  TQRDG*ELRGIT*NVTLKN*NQLTR*SSIAGALYLWGVWVPDQIHF*GLLILYVSF*GPWFWSVRDKRHLRSQPLLLRCPLITTPSSAVSSFKRLRDLAYRLEVL  316
                T++ G*  RGIT NVT +N*N  T *   A A Y   V VPDQ  +*G L  YV  * P +WS +  R  R Q LL R  L  TP +  S  +R + L YRLEVL
Subject  10864  TRKGG*V*RGITSNVTSRN*NLHTP*R*TAEAPY*LEV*VPDQTPY*GSLT*YVYS*EP*YWSAKGIRLRRLQQLL*RYQLTITPLNEASLLRR*KVLVYRLEVL  11178

Grapevine leafroll associated virus 3 isolate LN, complete genome

Sequence ID: JQ423939.1 Length: 18563 Number of Matches: 4

Range 1: 10928 to 11242 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
166.9 bits(358) 0.0 94/105(90%) 0/105(0%) Plus/Plus
Query        1  NPKRWVGVTRDNLERYVEKLKPTYTIKFDXXXXXXXXXXXXXPDTLLRVVDIICLFLRALVLECERQXXXXXXXXXXXXXXDYNSFKRSFVVQALKGLGIPVRGV  315
                NPKRWVGVTRDN+ERY+EKLKPTYT+K DSG ALL+GGLGSGPDTLLRVVDIICLFLRAL+LECER TS+TV+AAVVTVPADYNSFKRSFVV+ALKGLGIPVRGV
Subject  10928  NPKRWVGVTRDNVERYIEKLKPTYTVKIDSGDALLIGGLGSGPDTLLRVVDIICLFLRALILECERYTSATVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGV  11242

Range 2: 10930 to 11241 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
125.7 bits(268) 0.0 83/104(80%) 0/104(0%) Minus/Minus
Query        3  TPLTGMPSPLSA*TTKLRLKEL*SAGXXXXXXXXXXXVCLSHSKTRALKKRHIISTTLRSVSGXXXXXXXXXXXPLSNFIV*VGFNFST*RSKLSLVTPTHLFG  314
                TPLTGMP P +A TTKLRLKEL*SAGTVTTAA TV DV LSHS  +ALK +HIISTTL  VSGPEPKPPI+KA PLS F V VGFNFS *RS LSLVTPTHLFG
Subject  10930  TPLTGMPRPFNASTTKLRLKEL*SAGTVTTAAVTVADVYLSHSSIKALKNKHIISTTLNKVSGPEPKPPINKASPLSIFTVYVGFNFSM*RSTLSLVTPTHLFG  11241

Range 3: 10940 to 11242 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
85.4 bits(180) 0.0 42/101(42%) 0/101(0%) Minus/Minus
Query       13  NTSNRYAKSLKRLNDETALEGVVISGHRNNSG*DRR*RLSLTLQNQGP*KETYNINNPQKCIWSGTQTPHK*SAPAIELYRVSWFQFFNVTF*VIPRNSYP  315
                NT NR A++ +RLND+   + V++  +R +S  +R   +  TLQ QG  + TY INNPQ  +W+GT T   *   A+ LY V  F F NVT  V+ R+++P
Subject  10940  NTPNRNAETFQRLNDKAPFKRVIVGRYRYDSSRNRGGCIPFTLQYQGSQE*TYYINNPQ*GVWTGT*TSD**GISAVYLYGVRGF*FLNVTLDVVSRHTHP  11242

Range 4: 10929 to 11243 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.8 bits(98) 0.0 41/105(39%) 0/105(0%) Plus/Plus
Query        2  TQRDG*ELRGIT*NVTLKN*NQLTR*SSIAGALYLWGVWVPDQIHF*GLLILYVSF*GPWFWSVRDKRHLRSQPLLLRCPLITTPSSAVSSFKRLRDLAYRLEVL  316
                T++ G   R  T +VTL+N*N  T *   A   Y   V VP Q  +*GLLI YV  * P +WSV+     R + L  R     T  +   S +R +  A+RL VL
Subject  10929  TRKGGWV*RETTSSVTLRN*NPRTP*R*TAEMPY*SEV*VPVQTPY*GLLI*YVYS*EP*YWSVKGIHPPRLRLLS*RYRPTITLLNGALSLRR*KVSAFRLGVL  11243

Grapevine leafroll associated virus 3, complete genome

Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 4

Range 1: 10863 to 11177 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
166.9 bits(358) 0.0 95/105(90%) 0/105(0%) Plus/Plus
Query        1  NPKRWVGVTRDNLERYVEKLKPTYTIKFDXXXXXXXXXXXXXPDTLLRVVDIICLFLRALVLECERQXXXXXXXXXXXXXXDYNSFKRSFVVQALKGLGIPVRGV  315
                NPKRWVGVTRDN+ERYVEKLKPTYT+K DSGGALL+GGLGSGPDTLLRVVD+ICLFLRAL+LECER TS+TV+AAVVTVPADYNSFKRSFVV+ALKGLGIPVRGV
Subject  10863  NPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGV  11177

Range 2: 10865 to 11176 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
125.7 bits(268) 0.0 84/104(81%) 0/104(0%) Minus/Minus
Query        3  TPLTGMPSPLSA*TTKLRLKEL*SAGXXXXXXXXXXXVCLSHSKTRALKKRHIISTTLRSVSGXXXXXXXXXXXPLSNFIV*VGFNFST*RSKLSLVTPTHLFG  314
                TPLTG+P P SA TTKLRLKEL*SAGTVTTAA TV DV LSHS  +ALK +HI STTL  VSGPEPKPPI+KAPPLS F V VGFNFST*RS LSLVTPTHLFG
Subject  10865  TPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFG  11176

Range 3: 10875 to 11177 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.5 bits(226) 0.0 51/101(50%) 0/101(0%) Minus/Minus
Query       13  NTSNRYAKSLKRLNDETALEGVVISGHRNNSG*DRR*RLSLTLQNQGP*KETYNINNPQKCIWSGTQTPHK*SAPAIELYRVSWFQFFNVTF*VIPRNSYP  315
                NTSNRY K+ + LN+E + +GV+IS +R N G +R  R+  TLQ QG  + TY++N+PQ  + SGT T   * A A+ LY V  F F NVTF VIPR++YP
Subject  10875  NTSNRYTKTFQCLNNEASFKGVIISRYRYNCGCNRSRRIPFTLQYQGSQE*TYHVNDPQ*GVRSGT*TSD**GASAVYLYGVCGF*FLNVTFDVIPRHTYP  11177

Range 4: 10864 to 11178 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.2 bits(173) 0.0 52/105(50%) 0/105(0%) Plus/Plus
Query        2  TQRDG*ELRGIT*NVTLKN*NQLTR*SSIAGALYLWGVWVPDQIHF*GLLILYVSF*GPWFWSVRDKRHLRSQPLLLRCPLITTPSSAVSSFKRLRDLAYRLEVL  316
                T++ G*  RGIT NVTL+N*N  T *   A A Y   V VPD+  +*G L  YV  * P +WSV+  R LR QP L R  LI TP +  S  +  + L YRLEVL
Subject  10864  TRKGG*V*RGITSNVTLRN*NPHTP*R*TAEAPY*SEV*VPDRTPY*GSLT*YVYS*EP*YWSVKGIRLLRLQPQL*RYRLIITPLNEASLLRH*KVLVYRLEVL  11178

Nucleotide Sequence (1304 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
131
262
393
524
655
786
917
1048
1179
1304

Descriptions

Alignments

Grapevine leafroll associated virus 3 isolate Cl 766, complete genome

Sequence ID: EU344893.1 Length: 17919 Number of Matches: 21

Range 1: 3303 to 4604 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
921.1 bits(2004) 0.0 399/434(92%) 0/434(0%) Plus/Minus
Query        3  SRNTWGGFLLDMWCGARNGXXXXXXXXXXLSRYFGLGDFWNSCWWYTLRTGLYWFPVAFVGCGLCCVVIYSSPPFLNRRITDVAFWKQPLVVHLNLTSRFPTRLLVKDIVDTFFHTFNKSHSVSGTRTRRITLSFRHSCRRGNLFLDVSVLHASR*MGLFFTSNFPVGVNPHVAHICDTIIA*DTRSGSITIVTGNRFMLSPRWTSTFVIVKVPVIPKRLIIHIPPLYRWDVSKLRYGVVKQTPYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARXXXXXXXXXL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRRHEYPDKHLIPQYESDEVI*GNFTPKKY  1304
                SRNTWGGFLLD WCGARNGRRRHF*FHFFLSRYFGLGDFWNSCWWYTLRTGLYWFPVAFVGCGLCCVVIYSSPPFLNRRITDVAFWKQPLVVHLNLTSRFPTRLLVKDIVDTFFHTFNKSHSVSGTRTRRITLSFRHSCRRGNL LD+SVLHASR*MGLFFTSNFPVG NPHVAHICDTIIA*DTRSGSI IV GNRFMLSP WTSTFVIVKVPVIPKRLI+HIPPLYRWDVSKLRYGVVKQ PYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRP+QCP* KEKH*VP KSMCPNA*H AAGNGV*GRKR*QR GDLTFSYGRP DGH R KPS HD* STGYCA G TA*TT GL*T R *SFVTTARVPSSVSRNSAP+LPC+WG TQRRH+YP++HLIPQYES EVI GN TPK +
Subject   3303  SRNTWGGFLLDKWCGARNGRRRHF*FHFFLSRYFGLGDFWNSCWWYTLRTGLYWFPVAFVGCGLCCVVIYSSPPFLNRRITDVAFWKQPLVVHLNLTSRFPTRLLVKDIVDTFFHTFNKSHSVSGTRTRRITLSFRHSCRRGNLILDISVLHASR*MGLFFTSNFPVGANPHVAHICDTIIA*DTRSGSIAIVIGNRFMLSPGWTSTFVIVKVPVIPKRLIVHIPPLYRWDVSKLRYGVVKQAPYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPEQCP*AKEKH*VPRKSMCPNA*HIAAGNGV*GRKR*QRQGDLTFSYGRPGDGHGR*KPSLHD**STGYCASGYTA*TTSGL*TQRV*SFVTTARVPSSVSRNSAPVLPCDWGHTQRRHKYPNEHLIPQYESGEVIQGNLTPKSF  4604

Range 2: 3526 to 4047 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
374.5 bits(811) 0.0 160/174(92%) 0/174(0%) Plus/Minus
Query      560  KWIHHYRHREPLHAESQMDQHLRHSQSPGNT*ASHHTHSSPLPVGRKQVEVWCR*ANPL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RSQPTKTLFARLKIHRILC  1081
                KWIH YRHREPLHAES+MDQHLRHSQSPGNT*ASH THSSPLPVGRKQVEVWCR*A+PL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSP+AMSL+QRKTLSA EEHVPKCLTYCSRKWRMR*KTIA  RGLDV*LRSP *R +P KTLFARL IHRILC
Subject   3526  KWIHRYRHREPLHAESRMDQHLRHSQSPGNT*ASHRTHSSPLPVGRKQVEVWCR*ASPL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPRAMSLSQRKTLSAAEEHVPKCLTYCSRKWRMR*KTIAAPRGLDV*LRSPW*RPRPMKTLFARLMIHRILC  4047

Range 3: 4090 to 4389 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
251.7 bits(543) 0.0 98/100(98%) 0/100(0%) Plus/Minus
Query      218  SPLLESAHHRCRFLEATPCRPPQPHEPFPH*TVGERHRRHLFSHFQQKP*RQRYQNPTDHLVFPPQLQTGQPLPRRKCIARFEVNGSLLHQ*LPRWC*SP  517
                SPLLESAHHRCRFLEATPCRPPQPHEPFPH*TVGERHRRHLFSHFQQKP*RQRYQNPTDHLVFPPQLQTGQP PR KCIARFEVNGSLLHQ*LPRWC*SP
Subject   4090  SPLLESAHHRCRFLEATPCRPPQPHEPFPH*TVGERHRRHLFSHFQQKP*RQRYQNPTDHLVFPPQLQTGQPHPRHKCIARFEVNGSLLHQ*LPRWC*SP  4389

Range 4: 4367 to 4606 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
178.9 bits(384) 0.0 79/80(99%) 0/80(0%) Plus/Minus
Query        1  RVVTLGAGFSSTCGVALGTVVGGTSSFTSF*AGISDLATFGTAAGGTLSGLDCTGSLWPSSAAACAVLSSTALPPS*IGA  240
                RVVTLGAGFSST GVALGTVVGGTSSFTSF*AGISDLATFGTAAGGTLSGLDCTGSLWPSSAAACAVLSSTALPPS*IGA
Subject   4367  RVVTLGAGFSSTSGVALGTVVGGTSSFTSF*AGISDLATFGTAAGGTLSGLDCTGSLWPSSAAACAVLSSTALPPS*IGA  4606

Range 5: 3310 to 3483 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.9 bits(240) 0.0 49/58(84%) 0/58(0%) Plus/Minus
Query     1124  TSLEFRNYCPRTF*R*PQFRAYTSMQLGPHPKTPRISR*APYSAIRK**SHLRKLHSK  1297
                TSLEFRNYCPRTF* *PQFRA TSM+LGPHPKTP+IS+*APYSAIRK * H RK HSK
Subject   3310  TSLEFRNYCPRTF*C*PQFRACTSMRLGPHPKTPQISQ*APYSAIRKW*GHSRKPHSK  3483

Range 6: 3310 to 3918 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
400.2 bits(867) 0.0 180/203(89%) 0/203(0%) Minus/Plus
Query      689  FGVKFP*MTSSLSYCGIRCLSGYSWRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGFXXXXXXXXXXXLNVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*GVCLTTPYLNLLTSH  1297
                FGV+FP*MTS LSYCGIRC  GY WRLWV PQ HGS GAELRLTLEGTRAVVTKL* R VHKP VVYAV*PLAQYPVD *SC+EGF R  PS GRP*LNVKSP RCYRFLPHTPFPAA+C*AFGHMLF GT*CFSL *GHC GRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*G CLTTPYLNLLTSH
Subject   3310  FGVRFP*MTSPLSYCGIRCSLGYLWRLWVWPQSHGSTGAELRLTLEGTRAVVTKL*TRCVHKPLVVYAV*PLAQYPVDH*SCKEGFHRPWPSPGRP*LNVKSPWRCYRFLPHTPFPAAIC*AFGHMLFRGT*CFSLA*GHCSGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*GACLTTPYLNLLTSH  3918

Range 7: 4273 to 4515 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
196.3 bits(422) 0.0 81/81(100%) 0/81(0%) Minus/Plus
Query       92  STMSFTNSLVGKRLVRLRWTTRGCFQKATSVMRRFKKGGEL*MTTQHKPQPTKATGNQYSPVLRVYHQQLFQKSPSPKYLL  334
                STMSFTNSLVGKRLVRLRWTTRGCFQKATSVMRRFKKGGEL*MTTQHKPQPTKATGNQYSPVLRVYHQQLFQKSPSPKYLL
Subject   4273  STMSFTNSLVGKRLVRLRWTTRGCFQKATSVMRRFKKGGEL*MTTQHKPQPTKATGNQYSPVLRVYHQQLFQKSPSPKYLL  4515

Range 8: 3958 to 4221 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
195.3 bits(420) 0.0 82/88(93%) 0/88(0%) Minus/Plus
Query      386  ITGTLTMTKVLVHLGLSMKRFPVTIVMDPLLVSQAMMVSQMCATWGLTPTGKLLVKKRPIHLEACNTLTSRKRLPRLQLWRKDKVIRR  649
                ITGTLTMTKVLVH GLSMKRFP+TI MDPLLVSQAMMVSQMCATWGL PTGKLLVKKRPIHLEACNTL SR RLPRLQLWRKDKVIRR
Subject   3958  ITGTLTMTKVLVHPGLSMKRFPMTIAMDPLLVSQAMMVSQMCATWGLAPTGKLLVKKRPIHLEACNTLMSRMRLPRLQLWRKDKVIRR  4221

Range 9: 4493 to 4606 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
97.3 bits(206) 0.0 38/38(100%) 0/38(0%) Minus/Plus
Query        1  RQVRNTCSERSETRSAADDRSERHTTCRGETRPKCYDS  114
                RQVRNTCSERSETRSAADDRSERHTTCRGETRPKCYDS
Subject   4493  RQVRNTCSERSETRSAADDRSERHTTCRGETRPKCYDS  4606

Range 10: 3311 to 4303 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
668.2 bits(1452) 0.0 302/331(91%) 0/331(0%) Minus/Plus
Query      304  LE*SFLK*LHHFRIAE*GAYRDIRGVFGCGPNCMEV*ARNCG*R*KVRGQ*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGCDRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKGFA*RHHTSTCLRPTGRGEECV**DA*VLPGL*L*RRCWSIWDSA*SGSR*R**WIHF*CLKL*WCHKCARRGD*HQRGSYW*RRDPFTSKRAIHLRRGRGCPVCSCGGKTR*SVGFWYR*RYGFXXXXXXXXXXCLSPTV*W  1296
                LE* FL+* HHFRIAE*GA+ DI GVFGCGPN MEV ARNCG* *KVRGQ*LRNSKLV FTSR WFTR+N *HSIRWI SRAKRVF+G  RH GDRS*TSSPL  AIVFYLIRHFRLQYVRHLGTCSS ALNVFLW RDIA GEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKG A*RHHTSTCLRPTGRGEECV *DA*VLPGL*L*RRCWSI DSA*SGSR*R* WIHF*CLKL*WCHKCARRGD*HQRGSYW*RRDPFTSKRAIHL RG GCPVCSCGGKTR*SVGFWYR*RYGFC*KCEKRCRRCLSPTV*W
Subject   3311  LE*GFLE*PHHFRIAE*GAHWDICGVFGCGPNRMEVQARNCG*H*KVRGQ*LRNSKLVVFTSRWWFTRYNH*HSIRWIISRAKRVFIGRGRHQGDRS*TSSPLGAAIVFYLIRHFRLQYVRHLGTCSSAALNVFLWLRDIARGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKGLA*RHHTSTCLRPTGRGEECVR*DA*VLPGL*L*RRCWSIRDSA*SGSR*R*RWIHF*CLKL*WCHKCARRGD*HQRGSYW*RRDPFTSKRAIHLCRG*GCPVCSCGGKTR*SVGFWYR*RYGFC*KCEKRCRRCLSPTV*W  4303

Range 11: 4506 to 4604 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.6 bits(159) 0.0 32/33(97%) 0/33(0%) Minus/Plus
Query        3  IPAQKEVKLEVPPTTVPSATPHVEEKPAPSVTT  101
                IPAQKEVKLEVPPTTVPSATP VEEKPAPSVTT
Subject   4506  IPAQKEVKLEVPPTTVPSATPLVEEKPAPSVTT  4604

Range 12: 4340 to 4390 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.8 bits(85) 0.0 17/17(100%) 0/17(0%) Minus/Plus
Query      217  VASRKRHR*CADSRRGE  267
                VASRKRHR*CADSRRGE
Subject   4340  VASRKRHR*CADSRRGE  4390

Range 13: 3573 to 4022 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
331.0 bits(718) 0.0 148/150(99%) 0/150(0%) Minus/Plus
Query      585  AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMXXXXXXXXXGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVP  1034
                AV VTRATVAKRQVPLALLSFSTSYAISGC+MLGIWAHALPRHLMFFFGLGTLLGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVP
Subject   3573  AVAVTRATVAKRQVPLALLSFSTSYAISGCNMLGIWAHALPRHLMFFFGLGTLLGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVP  4022

Range 14: 4077 to 4439 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
217.7 bits(470) 0.0 119/121(98%) 0/121(0%) Minus/Plus
Query      168  NVRDVGIXXXXXXXXXXXTHSPRSVQYTYXXXXXXXXXXXXERQGDPSGSGTADAMAFVESVKKGVDDVFHQQSSGETAREVEVDDKGLLPESDIGDAPIQEGGRAVDDNTAQAAADEGHR  530
                NVRDVGI+TNGEVTGEEETHSPRSVQYTYVE+EVAPSAAVAERQGDPSGSGTADAMAFVESVKKGVDDVFHQQSSGETAREVEVDDKGLLPESDIGDAPIQEGGRAVDDNTAQAAADEGHR
Subject   4077  NVRDVGISTNGEVTGEEETHSPRSVQYTYVEDEVAPSAAVAERQGDPSGSGTADAMAFVESVKKGVDDVFHQQSSGETAREVEVDDKGLLPESDIGDAPIQEGGRAVDDNTAQAAADEGHR  4439

Range 15: 3309 to 3458 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
111.2 bits(237) 0.0 46/50(92%) 0/50(0%) Minus/Plus
Query     1149  FWSEVSLNDFITFVLRNKVLIGIFVASLGAAPIAWKYRRGIAANARRYAG  1298
                FWSEVSLND  TFVLRNKVLIGIFVASLG APIAWKYRRGIAAN RRYAG
Subject   3309  FWSEVSLNDLTTFVLRNKVLIGIFVASLGVAPIAWKYRRGIAANTRRYAG  3458

Range 16: 4549 to 4605 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.1 bits(103) 0.0 18/19(95%) 0/19(0%) Minus/Plus
Query        2  PFRAPHHMSRRNPPQVLRL  58
                PFRAPHH+SRRNPPQVLRL
Subject   4549  PFRAPHHLSRRNPPQVLRL  4605

Range 17: 3311 to 3940 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
428.1 bits(928) 0.0 197/210(94%) 0/210(0%) Plus/Minus
Query      667  YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVSXXXXXXXXXXXXIPRLYFHAIGAAPKDATNIPISTLFRNTKVMKSFKETSLQ  1296
                YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDS+AKGT*RLATVALVT TADENPL TT DPPDTVL V PRKPPAACE NE RVS*LLPAYLL LAAIPRLYFHAIGA PKDATNIP+STLFRNTKV++SFKETSLQ
Subject   3311  YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSSAKGT*RLATVALVTATADENPLCTTNDPPDTVLVVIPRKPPAACEHNEFRVS*LLPAYLLVLAAIPRLYFHAIGATPKDATNIPMSTLFRNTKVVRSFKETSLQ  3940

Range 18: 3983 to 4159 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.5 bits(226) 0.0 58/59(98%) 0/59(0%) Plus/Minus
Query      448  VYCTLRGEWXXXXXXXXXXXXIPTSRTFVTPS*LETLEVDPSLSSPGTASC*VPDGPAP  624
                VYCTLRGEWVSSSPVTSPLVLIPTSRTFVTPS*LETLEVDPSLSS GTASC*VPDGPAP
Subject   3983  VYCTLRGEWVSSSPVTSPLVLIPTSRTFVTPS*LETLEVDPSLSSSGTASC*VPDGPAP  4159

Range 19: 4202 to 4315 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
94.1 bits(199) 0.0 38/38(100%) 0/38(0%) Plus/Minus
Query      292  RAVSPLDCW*KTSSTPFFTLSTKAIASAVPEPDGSPCL  405
                RAVSPLDCW*KTSSTPFFTLSTKAIASAVPEPDGSPCL
Subject   4202  RAVSPLDCW*KTSSTPFFTLSTKAIASAVPEPDGSPCL  4315

Range 20: 4450 to 4512 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.1 bits(114) 0.0 21/21(100%) 0/21(0%) Plus/Minus
Query       95  QVFRTWRLLEQLLVVHSQDWT  157
                QVFRTWRLLEQLLVVHSQDWT
Subject   4450  QVFRTWRLLEQLLVVHSQDWT  4512

Range 21: 4561 to 4605 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.9 bits(72) 0.0 14/15(93%) 0/15(0%) Plus/Minus
Query        2  ES*HLGRVSPRHVVW  46
                ES*HLGRVSPR VVW
Subject   4561  ES*HLGRVSPRQVVW  4605

Grapevine leafroll associated virus 3 isolate 3138 07, complete genome

Sequence ID: JX559645.1 Length: 18498 Number of Matches: 22

Range 1: 3888 to 5183 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
978.0 bits(2128) 0.0 424/432(98%) 0/432(0%) Plus/Minus
Query        3  SRNTWGGFLLDMWCGARNGXXXXXXXXXXLSRYFGLGDFWNSCWWYTLRTGLYWFPVAFVGCGLCCVVIYSSPPFLNRRITDVAFWKQPLVVHLNLTSRFPTRLLVKDIVDTFFHTFNKSHSVSGTRTRRITLSFRHSCRRGNLFLDVSVLHASR*MGLFFTSNFPVGVNPHVAHICDTIIA*DTRSGSITIVTGNRFMLSPRWTSTFVIVKVPVIPKRLIIHIPPLYRWDVSKLRYGVVKQTPYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARXXXXXXXXXL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRRHEYPDKHLIPQYESDEVI*GNFTPK  1298
                SRNTWGGFLLD WCGARNGRRRHF*FHFFLSRYFGLGDFWNSCWWYTLRTGLYWFPVAFVGCGLCCVVIYSSPPFLNRRITDVAFWKQPLVVHLNLTSRFPTRLLVKDI DTFFHTFNKSHSVSGTRTRRITLSFRHSCRRGNLFLD+SVLHASR*MGLFFTSNFPVG NPHVAHICDTIIA*DTRSGSI IVTGNRFMLSPRWTSTFVIVKVPVIPKRLI+HIPPLYRWDVSKLRYGVVKQ PYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARG*TA*TTGGL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRRHEYPDKHLIPQYES EVI*GNFTPK
Subject   3888  SRNTWGGFLLDKWCGARNGRRRHF*FHFFLSRYFGLGDFWNSCWWYTLRTGLYWFPVAFVGCGLCCVVIYSSPPFLNRRITDVAFWKQPLVVHLNLTSRFPTRLLVKDIFDTFFHTFNKSHSVSGTRTRRITLSFRHSCRRGNLFLDISVLHASR*MGLFFTSNFPVGANPHVAHICDTIIA*DTRSGSIVIVTGNRFMLSPRWTSTFVIVKVPVIPKRLIVHIPPLYRWDVSKLRYGVVKQAPYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARG*TA*TTGGL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRRHEYPDKHLIPQYESGEVI*GNFTPK  5183

Range 2: 4105 to 4626 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
396.5 bits(859) 0.0 170/174(98%) 0/174(0%) Plus/Minus
Query      560  KWIHHYRHREPLHAESQMDQHLRHSQSPGNT*ASHHTHSSPLPVGRKQVEVWCR*ANPL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RSQPTKTLFARLKIHRILC  1081
                KWIH YR+REPLHAESQMDQHLRHSQSPGNT*ASH THSSPLPVGRKQVEVWCR*A+PL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RSQPTKTLFARLKIHRILC
Subject   4105  KWIHRYRNREPLHAESQMDQHLRHSQSPGNT*ASHRTHSSPLPVGRKQVEVWCR*ASPL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RSQPTKTLFARLKIHRILC  4626

Range 3: 4669 to 4968 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
251.7 bits(543) 0.0 98/100(98%) 0/100(0%) Plus/Minus
Query      218  SPLLESAHHRCRFLEATPCRPPQPHEPFPH*TVGERHRRHLFSHFQQKP*RQRYQNPTDHLVFPPQLQTGQPLPRRKCIARFEVNGSLLHQ*LPRWC*SP  517
                SPLLESAHHRCRFLEATPCRPPQPHEPFPH*TVGERH RHLFSHFQQKP*RQRYQNPTDHLVFPPQLQTGQPLPR KCIARFEVNGSLLHQ*LPRWC*SP
Subject   4669  SPLLESAHHRCRFLEATPCRPPQPHEPFPH*TVGERHLRHLFSHFQQKP*RQRYQNPTDHLVFPPQLQTGQPLPRHKCIARFEVNGSLLHQ*LPRWC*SP  4968

Range 4: 4946 to 5185 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
178.9 bits(384) 0.0 79/80(99%) 0/80(0%) Plus/Minus
Query        1  RVVTLGAGFSSTCGVALGTVVGGTSSFTSF*AGISDLATFGTAAGGTLSGLDCTGSLWPSSAAACAVLSSTALPPS*IGA  240
                RVVTLGAGFSST GVALGTVVGGTSSFTSF*AGISDLATFGTAAGGTLSGLDCTGSLWPSSAAACAVLSSTALPPS*IGA
Subject   4946  RVVTLGAGFSSTSGVALGTVVGGTSSFTSF*AGISDLATFGTAAGGTLSGLDCTGSLWPSSAAACAVLSSTALPPS*IGA  5185

Range 5: 3889 to 4062 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.4 bits(274) 0.0 56/58(97%) 0/58(0%) Plus/Minus
Query     1124  TSLEFRNYCPRTF*R*PQFRAYTSMQLGPHPKTPRISR*APYSAIRK**SHLRKLHSK  1297
                TSLEFRNY PRTF*R*PQFRAYTSMQLGPHPKTPRISR*APYSAIRK *SHLRKLHSK
Subject   3889  TSLEFRNYRPRTF*R*PQFRAYTSMQLGPHPKTPRISR*APYSAIRKW*SHLRKLHSK  4062

Range 6: 4183 to 4497 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
251.7 bits(543) 0.0 104/105(99%) 0/105(0%) Minus/Plus
Query      689  NVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*GVCLTTPYLNLLTSH  1003
                NVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*G CLTTPYLNLLTSH
Subject   4183  NVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*GACLTTPYLNLLTSH  4497

Range 7: 4537 to 4800 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
202.7 bits(436) 0.0 85/88(97%) 0/88(0%) Minus/Plus
Query      386  ITGTLTMTKVLVHLGLSMKRFPVTIVMDPLLVSQAMMVSQMCATWGLTPTGKLLVKKRPIHLEACNTLTSRKRLPRLQLWRKDKVIRR  649
                ITGTLTMTKVLVHLGLSMKRFPVTI MDPLLVSQAMMVSQMCATWGL PTGKLLVKKRPIHLEACNTL SRKRLPRLQLWRKDKVIRR
Subject   4537  ITGTLTMTKVLVHLGLSMKRFPVTITMDPLLVSQAMMVSQMCATWGLAPTGKLLVKKRPIHLEACNTLMSRKRLPRLQLWRKDKVIRR  4800

Range 8: 3889 to 4146 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
201.3 bits(433) 0.0 85/86(99%) 0/86(0%) Minus/Plus
Query     1040  FGVKFP*MTSSLSYCGIRCLSGYSWRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGF  1297
                FGVKFP*MTS LSYCGIRCLSGYSWRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGF
Subject   3889  FGVKFP*MTSPLSYCGIRCLSGYSWRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGF  4146

Range 9: 4852 to 5094 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
193.5 bits(416) 0.0 80/81(99%) 0/81(0%) Minus/Plus
Query       92  STMSFTNSLVGKRLVRLRWTTRGCFQKATSVMRRFKKGGEL*MTTQHKPQPTKATGNQYSPVLRVYHQQLFQKSPSPKYLL  334
                S MSFTNSLVGKRLVRLRWTTRGCFQKATSVMRRFKKGGEL*MTTQHKPQPTKATGNQYSPVLRVYHQQLFQKSPSPKYLL
Subject   4852  SKMSFTNSLVGKRLVRLRWTTRGCFQKATSVMRRFKKGGEL*MTTQHKPQPTKATGNQYSPVLRVYHQQLFQKSPSPKYLL  5094

Range 10: 5072 to 5185 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
97.3 bits(206) 0.0 38/38(100%) 0/38(0%) Minus/Plus
Query        1  RQVRNTCSERSETRSAADDRSERHTTCRGETRPKCYDS  114
                RQVRNTCSERSETRSAADDRSERHTTCRGETRPKCYDS
Subject   5072  RQVRNTCSERSETRSAADDRSERHTTCRGETRPKCYDS  5185

Range 11: 3890 to 4882 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
742.0 bits(1613) 0.0 325/331(98%) 0/331(0%) Minus/Plus
Query      304  LE*SFLK*LHHFRIAE*GAYRDIRGVFGCGPNCMEV*ARNCG*R*KVRGQ*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGCDRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKGFA*RHHTSTCLRPTGRGEECV**DA*VLPGL*L*RRCWSIWDSA*SGSR*R**WIHF*CLKL*WCHKCARRGD*HQRGSYW*RRDPFTSKRAIHLRRGRGCPVCSCGGKTR*SVGFWYR*RYGFXXXXXXXXXXCLSPTV*W  1296
                LE*SFLK*LHHFRIAE*GAYRDIRGVFGCGPNCMEV*ARNCG*R*KVRG+*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGCDRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKG A*RHHTSTCLRPTGRGEECV *DA*VLPGL*L*RRCWSIWDSA*SGSR R* WIHF*CLKL*WCHKCARRGD*HQRGSYW*RRDPFTSKRAIHL RGRGCPVCSCGGKTR*SVGFWYR*RYGFC*KCEKRCRRCLSPTV*W
Subject   3890  LE*SFLK*LHHFRIAE*GAYRDIRGVFGCGPNCMEV*ARNCG*R*KVRGR*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGCDRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKGLA*RHHTSTCLRPTGRGEECVR*DA*VLPGL*L*RRCWSIWDSA*SGSRLR*RWIHF*CLKL*WCHKCARRGD*HQRGSYW*RRDPFTSKRAIHLCRGRGCPVCSCGGKTR*SVGFWYR*RYGFC*KCEKRCRRCLSPTV*W  4882

Range 12: 5085 to 5183 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.6 bits(159) 0.0 32/33(97%) 0/33(0%) Minus/Plus
Query        3  IPAQKEVKLEVPPTTVPSATPHVEEKPAPSVTT  101
                IPAQKEVKLEVPPTTVPSATP VEEKPAPSVTT
Subject   5085  IPAQKEVKLEVPPTTVPSATPLVEEKPAPSVTT  5183

Range 13: 4919 to 4969 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.8 bits(85) 0.0 17/17(100%) 0/17(0%) Minus/Plus
Query      217  VASRKRHR*CADSRRGE  267
                VASRKRHR*CADSRRGE
Subject   4919  VASRKRHR*CADSRRGE  4969

Range 14: 4152 to 4601 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
334.7 bits(726) 0.0 150/150(100%) 0/150(0%) Minus/Plus
Query      585  AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMXXXXXXXXXGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVP  1034
                AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMFFFGLGTLLGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVP
Subject   4152  AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMFFFGLGTLLGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVP  4601

Range 15: 4656 to 5018 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
215.8 bits(466) 0.0 119/121(98%) 0/121(0%) Minus/Plus
Query      168  NVRDVGIXXXXXXXXXXXTHSPRSVQYTYXXXXXXXXXXXXERQGDPSGSGTADAMAFVESVKKGVDDVFHQQSSGETAREVEVDDKGLLPESDIGDAPIQEGGRAVDDNTAQAAADEGHR  530
                NVRDVGI+TNGEVTGEEETHSPRSVQYTYVEEEVAPSAAVAERQGDPSGSGTADAMAFVESVKKGV+DVFHQQSSGETAREVEVDDKGLLPESDIGDAPIQEGGRAVDDNTAQAAADEGHR
Subject   4656  NVRDVGISTNGEVTGEEETHSPRSVQYTYVEEEVAPSAAVAERQGDPSGSGTADAMAFVESVKKGVEDVFHQQSSGETAREVEVDDKGLLPESDIGDAPIQEGGRAVDDNTAQAAADEGHR  5018

Range 16: 3888 to 4037 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
117.6 bits(251) 0.0 49/50(98%) 0/50(0%) Minus/Plus
Query     1149  FWSEVSLNDFITFVLRNKVLIGIFVASLGAAPIAWKYRRGIAANARRYAG  1298
                FWSEVSLNDF TFVLRNKVLIGIFVASLGAAPIAWKYRRGIAANARRYAG
Subject   3888  FWSEVSLNDFTTFVLRNKVLIGIFVASLGAAPIAWKYRRGIAANARRYAG  4037

Range 17: 5128 to 5184 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.1 bits(103) 0.0 18/19(95%) 0/19(0%) Minus/Plus
Query        2  PFRAPHHMSRRNPPQVLRL  58
                PFRAPHH+SRRNPPQVLRL
Subject   5128  PFRAPHHLSRRNPPQVLRL  5184

Range 18: 3884 to 4519 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
456.5 bits(990) 0.0 209/212(99%) 0/212(0%) Plus/Minus
Query      667  YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVSXXXXXXXXXXXXIPRLYFHAIGAAPKDATNIPISTLFRNTKVMKSFKETSLQKS  1302
                YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVS*L PAYLLALAAIPRLYFHAIGAAPKDATNIPISTLFRNTKV+KSFKETSLQ S
Subject   3884  YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVS*LPPAYLLALAAIPRLYFHAIGAAPKDATNIPISTLFRNTKVVKSFKETSLQNS  4519

Range 19: 4562 to 4738 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.5 bits(226) 0.0 58/59(98%) 0/59(0%) Plus/Minus
Query      448  VYCTLRGEWXXXXXXXXXXXXIPTSRTFVTPS*LETLEVDPSLSSPGTASC*VPDGPAP  624
                VYCTLRGEWVSSSPVTSPLVLIPTSRTFVTPS*LETLEVDPSLS PGTASC*VPDGPAP
Subject   4562  VYCTLRGEWVSSSPVTSPLVLIPTSRTFVTPS*LETLEVDPSLS*PGTASC*VPDGPAP  4738

Range 20: 4781 to 4894 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
94.1 bits(199) 0.0 38/38(100%) 0/38(0%) Plus/Minus
Query      292  RAVSPLDCW*KTSSTPFFTLSTKAIASAVPEPDGSPCL  405
                RAVSPLDCW*KTSSTPFFTLSTKAIASAVPEPDGSPCL
Subject   4781  RAVSPLDCW*KTSSTPFFTLSTKAIASAVPEPDGSPCL  4894

Range 21: 5029 to 5091 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.1 bits(114) 0.0 21/21(100%) 0/21(0%) Plus/Minus
Query       95  QVFRTWRLLEQLLVVHSQDWT  157
                QVFRTWRLLEQLLVVHSQDWT
Subject   5029  QVFRTWRLLEQLLVVHSQDWT  5091

Range 22: 5140 to 5184 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.9 bits(72) 0.0 14/15(93%) 0/15(0%) Plus/Minus
Query        2  ES*HLGRVSPRHVVW  46
                ES*HLGRVSPR VVW
Subject   5140  ES*HLGRVSPRQVVW  5184

Grapevine leafroll associated virus 3 isolate WA MR, complete genome

Sequence ID: GU983863.1 Length: 18498 Number of Matches: 22

Range 1: 3888 to 5183 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
978.0 bits(2128) 0.0 425/432(98%) 0/432(0%) Plus/Minus
Query        3  SRNTWGGFLLDMWCGARNGXXXXXXXXXXLSRYFGLGDFWNSCWWYTLRTGLYWFPVAFVGCGLCCVVIYSSPPFLNRRITDVAFWKQPLVVHLNLTSRFPTRLLVKDIVDTFFHTFNKSHSVSGTRTRRITLSFRHSCRRGNLFLDVSVLHASR*MGLFFTSNFPVGVNPHVAHICDTIIA*DTRSGSITIVTGNRFMLSPRWTSTFVIVKVPVIPKRLIIHIPPLYRWDVSKLRYGVVKQTPYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARXXXXXXXXXL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRRHEYPDKHLIPQYESDEVI*GNFTPK  1298
                SRNTWGGFLLD WCGARNGRRRHF*FHFFLSRYFGLGDFWNSCWWYTLRTGLYWFPVAFVGCGLCCVVIYSSPPFLNRRITDVAFWKQPLVVHLNLTSRFPTRLLVKDIVDTFFHTFNKSHSVSGTRTRRITLSFRHSCRRGNLFLD+SVLHASR*MGLFFTSNFPVG NPHVAHICDTII *DTRSGSI IVTGNRFMLSPRWTSTFVIVKVPVIPKRLIIHIPPLYRWDVSKLRYGVVKQ PYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARG*TA*TTGGL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRRHEYPDKHLIPQYES EVI*GNFTPK
Subject   3888  SRNTWGGFLLDKWCGARNGRRRHF*FHFFLSRYFGLGDFWNSCWWYTLRTGLYWFPVAFVGCGLCCVVIYSSPPFLNRRITDVAFWKQPLVVHLNLTSRFPTRLLVKDIVDTFFHTFNKSHSVSGTRTRRITLSFRHSCRRGNLFLDISVLHASR*MGLFFTSNFPVGANPHVAHICDTIID*DTRSGSIAIVTGNRFMLSPRWTSTFVIVKVPVIPKRLIIHIPPLYRWDVSKLRYGVVKQAPYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARG*TA*TTGGL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRRHEYPDKHLIPQYESGEVI*GNFTPK  5183

Range 2: 4105 to 4626 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
403.4 bits(874) 0.0 172/174(99%) 0/174(0%) Plus/Minus
Query      560  KWIHHYRHREPLHAESQMDQHLRHSQSPGNT*ASHHTHSSPLPVGRKQVEVWCR*ANPL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RSQPTKTLFARLKIHRILC  1081
                KWIH YRHREPLHAESQMDQHLRHSQSPGNT*ASHHTHSSPLPVGRKQVEVWCR*A+PL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RSQPTKTLFARLKIHRILC
Subject   4105  KWIHRYRHREPLHAESQMDQHLRHSQSPGNT*ASHHTHSSPLPVGRKQVEVWCR*ASPL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RSQPTKTLFARLKIHRILC  4626

Range 3: 4669 to 4968 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
254.9 bits(550) 0.0 99/100(99%) 0/100(0%) Plus/Minus
Query      218  SPLLESAHHRCRFLEATPCRPPQPHEPFPH*TVGERHRRHLFSHFQQKP*RQRYQNPTDHLVFPPQLQTGQPLPRRKCIARFEVNGSLLHQ*LPRWC*SP  517
                SPLLESAHHRCRFLEATPCRPPQPHEPFPH*TVGERHRRHLFSHFQQKP*RQRYQNPTDHLVFPPQLQTGQPLPR KCIARFEVNGSLLHQ*LPRWC*SP
Subject   4669  SPLLESAHHRCRFLEATPCRPPQPHEPFPH*TVGERHRRHLFSHFQQKP*RQRYQNPTDHLVFPPQLQTGQPLPRHKCIARFEVNGSLLHQ*LPRWC*SP  4968

Range 4: 4946 to 5185 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
178.9 bits(384) 0.0 79/80(99%) 0/80(0%) Plus/Minus
Query        1  RVVTLGAGFSSTCGVALGTVVGGTSSFTSF*AGISDLATFGTAAGGTLSGLDCTGSLWPSSAAACAVLSSTALPPS*IGA  240
                RVVTLGAGFSST GVALGTVVGGTSSFTSF*AGISDLATFGTAAGGTLSGLDCTGSLWPSSAAACAVLSSTALPPS*IGA
Subject   4946  RVVTLGAGFSSTSGVALGTVVGGTSSFTSF*AGISDLATFGTAAGGTLSGLDCTGSLWPSSAAACAVLSSTALPPS*IGA  5185

Range 5: 3889 to 4062 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
133.9 bits(286) 0.0 57/58(98%) 0/58(0%) Plus/Minus
Query     1124  TSLEFRNYCPRTF*R*PQFRAYTSMQLGPHPKTPRISR*APYSAIRK**SHLRKLHSK  1297
                TSLEFRNYCPRTF*R*PQFRAYTSMQLGPHPKTPRISR*APYSAIRK *SHLRKLHSK
Subject   3889  TSLEFRNYCPRTF*R*PQFRAYTSMQLGPHPKTPRISR*APYSAIRKW*SHLRKLHSK  4062

Range 6: 4183 to 4497 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
251.7 bits(543) 0.0 104/105(99%) 0/105(0%) Minus/Plus
Query      689  NVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*GVCLTTPYLNLLTSH  1003
                NVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*G CLTTPYLNLLTSH
Subject   4183  NVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*GACLTTPYLNLLTSH  4497

Range 7: 3889 to 4146 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
201.3 bits(433) 0.0 85/86(99%) 0/86(0%) Minus/Plus
Query     1040  FGVKFP*MTSSLSYCGIRCLSGYSWRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGF  1297
                FGVKFP*MTS LSYCGIRCLSGYSWRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGF
Subject   3889  FGVKFP*MTSPLSYCGIRCLSGYSWRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGF  4146

Range 8: 4537 to 4800 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
201.3 bits(433) 0.0 84/88(95%) 0/88(0%) Minus/Plus
Query      386  ITGTLTMTKVLVHLGLSMKRFPVTIVMDPLLVSQAMMVSQMCATWGLTPTGKLLVKKRPIHLEACNTLTSRKRLPRLQLWRKDKVIRR  649
                ITGTLTMTKVLVHLGLSMKRFPVTI MDPLLVSQ+MMVSQMCATWGL PTGKLLVKKRPIHLEACNTL SRKRLPRLQLWRKDKVIRR
Subject   4537  ITGTLTMTKVLVHLGLSMKRFPVTIAMDPLLVSQSMMVSQMCATWGLAPTGKLLVKKRPIHLEACNTLMSRKRLPRLQLWRKDKVIRR  4800

Range 9: 4852 to 5094 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
196.3 bits(422) 0.0 81/81(100%) 0/81(0%) Minus/Plus
Query       92  STMSFTNSLVGKRLVRLRWTTRGCFQKATSVMRRFKKGGEL*MTTQHKPQPTKATGNQYSPVLRVYHQQLFQKSPSPKYLL  334
                STMSFTNSLVGKRLVRLRWTTRGCFQKATSVMRRFKKGGEL*MTTQHKPQPTKATGNQYSPVLRVYHQQLFQKSPSPKYLL
Subject   4852  STMSFTNSLVGKRLVRLRWTTRGCFQKATSVMRRFKKGGEL*MTTQHKPQPTKATGNQYSPVLRVYHQQLFQKSPSPKYLL  5094

Range 10: 5072 to 5185 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
97.3 bits(206) 0.0 38/38(100%) 0/38(0%) Minus/Plus
Query        1  RQVRNTCSERSETRSAADDRSERHTTCRGETRPKCYDS  114
                RQVRNTCSERSETRSAADDRSERHTTCRGETRPKCYDS
Subject   5072  RQVRNTCSERSETRSAADDRSERHTTCRGETRPKCYDS  5185

Range 11: 3890 to 4882 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
746.1 bits(1622) 0.0 327/331(99%) 0/331(0%) Minus/Plus
Query      304  LE*SFLK*LHHFRIAE*GAYRDIRGVFGCGPNCMEV*ARNCG*R*KVRGQ*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGCDRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKGFA*RHHTSTCLRPTGRGEECV**DA*VLPGL*L*RRCWSIWDSA*SGSR*R**WIHF*CLKL*WCHKCARRGD*HQRGSYW*RRDPFTSKRAIHLRRGRGCPVCSCGGKTR*SVGFWYR*RYGFXXXXXXXXXXCLSPTV*W  1296
                LE*SFLK*LHHFRIAE*GAYRDIRGVFGCGPNCMEV*ARNCG*R*KVRGQ*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGCDRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKG A*RHHTSTCLRPTGRGEECV**DA*VLPGL*L*RRCWSIWDSA*SGSR*R* WIHF*CL L*WCHKCARRGD*HQRGSYW*RRDPFTSKRAIHL RGRGCPVCSCGGKTR*SVGFWYR*RYGFC*KCEKRCRRCLSPTV*W
Subject   3890  LE*SFLK*LHHFRIAE*GAYRDIRGVFGCGPNCMEV*ARNCG*R*KVRGQ*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGCDRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKGLA*RHHTSTCLRPTGRGEECV**DA*VLPGL*L*RRCWSIWDSA*SGSR*R*RWIHF*CLNL*WCHKCARRGD*HQRGSYW*RRDPFTSKRAIHLCRGRGCPVCSCGGKTR*SVGFWYR*RYGFC*KCEKRCRRCLSPTV*W  4882

Range 12: 5085 to 5183 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.6 bits(159) 0.0 32/33(97%) 0/33(0%) Minus/Plus
Query        3  IPAQKEVKLEVPPTTVPSATPHVEEKPAPSVTT  101
                IPAQKEVKLEVPPTTVPSATP VEEKPAPSVTT
Subject   5085  IPAQKEVKLEVPPTTVPSATPLVEEKPAPSVTT  5183

Range 13: 4919 to 4969 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.8 bits(85) 0.0 17/17(100%) 0/17(0%) Minus/Plus
Query      217  VASRKRHR*CADSRRGE  267
                VASRKRHR*CADSRRGE
Subject   4919  VASRKRHR*CADSRRGE  4969

Range 14: 4152 to 4601 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
334.7 bits(726) 0.0 150/150(100%) 0/150(0%) Minus/Plus
Query      585  AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMXXXXXXXXXGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVP  1034
                AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMFFFGLGTLLGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVP
Subject   4152  AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMFFFGLGTLLGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVP  4601

Range 15: 4656 to 5018 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
217.7 bits(470) 0.0 120/121(99%) 0/121(0%) Minus/Plus
Query      168  NVRDVGIXXXXXXXXXXXTHSPRSVQYTYXXXXXXXXXXXXERQGDPSGSGTADAMAFVESVKKGVDDVFHQQSSGETAREVEVDDKGLLPESDIGDAPIQEGGRAVDDNTAQAAADEGHR  530
                NVRDVGI+TNGEVTGEEETHSPRSVQYTYVEEEVAPSAAVAERQGDPSGSGTADAMAFVESVKKGVDDVFHQQSSGETAREVEVDDKGLLPESDIGDAPIQEGGRAVDDNTAQAAADEGHR
Subject   4656  NVRDVGISTNGEVTGEEETHSPRSVQYTYVEEEVAPSAAVAERQGDPSGSGTADAMAFVESVKKGVDDVFHQQSSGETAREVEVDDKGLLPESDIGDAPIQEGGRAVDDNTAQAAADEGHR  5018

Range 16: 3888 to 4037 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
117.6 bits(251) 0.0 49/50(98%) 0/50(0%) Minus/Plus
Query     1149  FWSEVSLNDFITFVLRNKVLIGIFVASLGAAPIAWKYRRGIAANARRYAG  1298
                FWSEVSLNDF TFVLRNKVLIGIFVASLGAAPIAWKYRRGIAANARRYAG
Subject   3888  FWSEVSLNDFTTFVLRNKVLIGIFVASLGAAPIAWKYRRGIAANARRYAG  4037

Range 17: 5128 to 5184 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.1 bits(103) 0.0 18/19(95%) 0/19(0%) Minus/Plus
Query        2  PFRAPHHMSRRNPPQVLRL  58
                PFRAPHH+SRRNPPQVLRL
Subject   5128  PFRAPHHLSRRNPPQVLRL  5184

Range 18: 3884 to 4519 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
456.5 bits(990) 0.0 210/212(99%) 0/212(0%) Plus/Minus
Query      667  YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVSXXXXXXXXXXXXIPRLYFHAIGAAPKDATNIPISTLFRNTKVMKSFKETSLQKS  1302
                YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVS*LLPAYLLALAAIPRLYFHAIGAAPKDATNIPISTLFRNTKV+KSFKETSLQ S
Subject   3884  YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVS*LLPAYLLALAAIPRLYFHAIGAAPKDATNIPISTLFRNTKVVKSFKETSLQNS  4519

Range 19: 4562 to 4738 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
109.2 bits(232) 0.0 58/59(98%) 0/59(0%) Plus/Minus
Query      448  VYCTLRGEWXXXXXXXXXXXXIPTSRTFVTPS*LETLEVDPSLSSPGTASC*VPDGPAP  624
                VYCTLRGEWVSSSPVTSPLVLIPTSRTFVTPS*+ETLEVDPSLSSPGTASC*VPDGPAP
Subject   4562  VYCTLRGEWVSSSPVTSPLVLIPTSRTFVTPS*IETLEVDPSLSSPGTASC*VPDGPAP  4738

Range 20: 4781 to 4894 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
94.1 bits(199) 0.0 38/38(100%) 0/38(0%) Plus/Minus
Query      292  RAVSPLDCW*KTSSTPFFTLSTKAIASAVPEPDGSPCL  405
                RAVSPLDCW*KTSSTPFFTLSTKAIASAVPEPDGSPCL
Subject   4781  RAVSPLDCW*KTSSTPFFTLSTKAIASAVPEPDGSPCL  4894

Range 21: 5029 to 5091 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.1 bits(114) 0.0 21/21(100%) 0/21(0%) Plus/Minus
Query       95  QVFRTWRLLEQLLVVHSQDWT  157
                QVFRTWRLLEQLLVVHSQDWT
Subject   5029  QVFRTWRLLEQLLVVHSQDWT  5091

Range 22: 5140 to 5184 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.9 bits(72) 0.0 14/15(93%) 0/15(0%) Plus/Minus
Query        2  ES*HLGRVSPRHVVW  46
                ES*HLGRVSPR VVW
Subject   5140  ES*HLGRVSPRQVVW  5184

Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome

Sequence ID: KX756669.1 Length: 18313 Number of Matches: 22

Range 1: 3703 to 4998 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
974.8 bits(2121) 0.0 423/432(98%) 0/432(0%) Plus/Minus
Query        3  SRNTWGGFLLDMWCGARNGXXXXXXXXXXLSRYFGLGDFWNSCWWYTLRTGLYWFPVAFVGCGLCCVVIYSSPPFLNRRITDVAFWKQPLVVHLNLTSRFPTRLLVKDIVDTFFHTFNKSHSVSGTRTRRITLSFRHSCRRGNLFLDVSVLHASR*MGLFFTSNFPVGVNPHVAHICDTIIA*DTRSGSITIVTGNRFMLSPRWTSTFVIVKVPVIPKRLIIHIPPLYRWDVSKLRYGVVKQTPYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARXXXXXXXXXL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRRHEYPDKHLIPQYESDEVI*GNFTPK  1298
                SRNTWGGFLLD WCGARNGRRRHF*FHFFLSRYFGLGDFWNSCWWYTLRTGLYWFP AFVGCGLCCVVIYSSPPFLNR ITDVAFWKQPLVVHLNLTSRFPTRLLVKDIVDTFFHTFNKSHSVSGTRTRRITLSFRHSCRRGNLFLD+SVLHASR*MGLFFTSNFPVG NPHVAHICDTIIA*DTRSGSI IVTGNRFMLSPRWTSTFVIVKVPVIPKRLI+HIPPLYRWDVSKLRYGVVKQ PYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARG*TA*TTGGL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRRHEYPDKHLIPQYES EVI*GNFTPK
Subject   3703  SRNTWGGFLLDKWCGARNGRRRHF*FHFFLSRYFGLGDFWNSCWWYTLRTGLYWFPDAFVGCGLCCVVIYSSPPFLNRHITDVAFWKQPLVVHLNLTSRFPTRLLVKDIVDTFFHTFNKSHSVSGTRTRRITLSFRHSCRRGNLFLDISVLHASR*MGLFFTSNFPVGANPHVAHICDTIIA*DTRSGSIAIVTGNRFMLSPRWTSTFVIVKVPVIPKRLIVHIPPLYRWDVSKLRYGVVKQAPYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARG*TA*TTGGL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRRHEYPDKHLIPQYESGEVI*GNFTPK  4998

Range 2: 3920 to 4441 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
399.7 bits(866) 0.0 171/174(98%) 0/174(0%) Plus/Minus
Query      560  KWIHHYRHREPLHAESQMDQHLRHSQSPGNT*ASHHTHSSPLPVGRKQVEVWCR*ANPL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RSQPTKTLFARLKIHRILC  1081
                KWIH YRHREPLHAESQMDQHLRHSQSPGNT*ASH THSSPLPVGRKQVEVWCR*A+PL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RSQPTKTLFARLKIHRILC
Subject   3920  KWIHRYRHREPLHAESQMDQHLRHSQSPGNT*ASHRTHSSPLPVGRKQVEVWCR*ASPL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RSQPTKTLFARLKIHRILC  4441

Range 3: 4484 to 4783 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
254.9 bits(550) 0.0 99/100(99%) 0/100(0%) Plus/Minus
Query      218  SPLLESAHHRCRFLEATPCRPPQPHEPFPH*TVGERHRRHLFSHFQQKP*RQRYQNPTDHLVFPPQLQTGQPLPRRKCIARFEVNGSLLHQ*LPRWC*SP  517
                SPLLESAHHRCRFLEATPCRPPQPHEPFPH*TVGERHRRHLFSHFQQKP*RQRYQNPTDHLVFPPQLQTGQPLPR KCIARFEVNGSLLHQ*LPRWC*SP
Subject   4484  SPLLESAHHRCRFLEATPCRPPQPHEPFPH*TVGERHRRHLFSHFQQKP*RQRYQNPTDHLVFPPQLQTGQPLPRHKCIARFEVNGSLLHQ*LPRWC*SP  4783

Range 4: 4764 to 5000 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
171.5 bits(368) 0.0 77/79(97%) 0/79(0%) Plus/Minus
Query        1  RVVTLGAGFSSTCGVALGTVVGGTSSFTSF*AGISDLATFGTAAGGTLSGLDCTGSLWPSSAAACAVLSSTALPPS*IG  237
                RVVTLGAGFSST GVALGTVVGGTSSFTSF*AGISDLATFGTAAGGTLSGLDCTGSL PSSAAACAVLSSTALPPS*IG
Subject   4764  RVVTLGAGFSSTSGVALGTVVGGTSSFTSF*AGISDLATFGTAAGGTLSGLDCTGSLMPSSAAACAVLSSTALPPS*IG  5000

Range 5: 3704 to 3877 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.4 bits(274) 0.0 56/58(97%) 0/58(0%) Plus/Minus
Query     1124  TSLEFRNYCPRTF*R*PQFRAYTSMQLGPHPKTPRISR*APYSAIRK**SHLRKLHSK  1297
                TSLEFRNY PRTF*R*PQFRAYTSMQLGPHPKTPRISR*APYSAIRK *SHLRKLHSK
Subject   3704  TSLEFRNYRPRTF*R*PQFRAYTSMQLGPHPKTPRISR*APYSAIRKW*SHLRKLHSK  3877

Range 6: 3998 to 4312 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
251.7 bits(543) 0.0 104/105(99%) 0/105(0%) Minus/Plus
Query      689  NVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*GVCLTTPYLNLLTSH  1003
                NVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*G CLTTPYLNLLTSH
Subject   3998  NVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*GACLTTPYLNLLTSH  4312

Range 7: 4352 to 4615 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
202.7 bits(436) 0.0 85/88(97%) 0/88(0%) Minus/Plus
Query      386  ITGTLTMTKVLVHLGLSMKRFPVTIVMDPLLVSQAMMVSQMCATWGLTPTGKLLVKKRPIHLEACNTLTSRKRLPRLQLWRKDKVIRR  649
                ITGTLTMTKVLVHLGLSMKRFPVTI MDPLLVSQAMMVSQMCATWGL PTGKLLVKKRPIHLEACNTL SRKRLPRLQLWRKDKVIRR
Subject   4352  ITGTLTMTKVLVHLGLSMKRFPVTIAMDPLLVSQAMMVSQMCATWGLAPTGKLLVKKRPIHLEACNTLMSRKRLPRLQLWRKDKVIRR  4615

Range 8: 3704 to 3961 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
201.3 bits(433) 0.0 85/86(99%) 0/86(0%) Minus/Plus
Query     1040  FGVKFP*MTSSLSYCGIRCLSGYSWRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGF  1297
                FGVKFP*MTS LSYCGIRCLSGYSWRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGF
Subject   3704  FGVKFP*MTSPLSYCGIRCLSGYSWRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGF  3961

Range 9: 4667 to 4909 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
190.8 bits(410) 0.0 79/81(98%) 0/81(0%) Minus/Plus
Query       92  STMSFTNSLVGKRLVRLRWTTRGCFQKATSVMRRFKKGGEL*MTTQHKPQPTKATGNQYSPVLRVYHQQLFQKSPSPKYLL  334
                STMSFTNSLVGKRLVRLRWTTRGCFQKATSVM RFKKGGEL*MTTQHKPQPTKA+GNQYSPVLRVYHQQLFQKSPSPKYLL
Subject   4667  STMSFTNSLVGKRLVRLRWTTRGCFQKATSVMCRFKKGGEL*MTTQHKPQPTKASGNQYSPVLRVYHQQLFQKSPSPKYLL  4909

Range 10: 4887 to 5000 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
97.3 bits(206) 0.0 38/38(100%) 0/38(0%) Minus/Plus
Query        1  RQVRNTCSERSETRSAADDRSERHTTCRGETRPKCYDS  114
                RQVRNTCSERSETRSAADDRSERHTTCRGETRPKCYDS
Subject   4887  RQVRNTCSERSETRSAADDRSERHTTCRGETRPKCYDS  5000

Range 11: 3705 to 4697 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
744.3 bits(1618) 0.0 326/331(98%) 0/331(0%) Minus/Plus
Query      304  LE*SFLK*LHHFRIAE*GAYRDIRGVFGCGPNCMEV*ARNCG*R*KVRGQ*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGCDRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKGFA*RHHTSTCLRPTGRGEECV**DA*VLPGL*L*RRCWSIWDSA*SGSR*R**WIHF*CLKL*WCHKCARRGD*HQRGSYW*RRDPFTSKRAIHLRRGRGCPVCSCGGKTR*SVGFWYR*RYGFXXXXXXXXXXCLSPTV*W  1296
                LE*SFLK*LHHFRIAE*GAYRDIRGVFGCGPNCMEV*ARNCG*R*KVRG+*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGCDRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKG A*RHHTSTCLRPTGRGEECV *DA*VLPGL*L*RRCWSIWDSA*SGSR*R* WIHF*CLKL*WCHKCARRGD*HQRGSYW*RRDPFTSKRAIHL RGRGCPVCSCGGKTR*SVGFWYR*RYGFC*KCEKRCRRCLSPTV*W
Subject   3705  LE*SFLK*LHHFRIAE*GAYRDIRGVFGCGPNCMEV*ARNCG*R*KVRGR*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGCDRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKGLA*RHHTSTCLRPTGRGEECVR*DA*VLPGL*L*RRCWSIWDSA*SGSR*R*RWIHF*CLKL*WCHKCARRGD*HQRGSYW*RRDPFTSKRAIHLCRGRGCPVCSCGGKTR*SVGFWYR*RYGFC*KCEKRCRRCLSPTV*W  4697

Range 12: 4900 to 4998 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.6 bits(159) 0.0 32/33(97%) 0/33(0%) Minus/Plus
Query        3  IPAQKEVKLEVPPTTVPSATPHVEEKPAPSVTT  101
                IPAQKEVKLEVPPTTVPSATP VEEKPAPSVTT
Subject   4900  IPAQKEVKLEVPPTTVPSATPLVEEKPAPSVTT  4998

Range 13: 4734 to 4784 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.8 bits(85) 0.0 17/17(100%) 0/17(0%) Minus/Plus
Query      217  VASRKRHR*CADSRRGE  267
                VASRKRHR*CADSRRGE
Subject   4734  VASRKRHR*CADSRRGE  4784

Range 14: 3967 to 4416 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
334.7 bits(726) 0.0 150/150(100%) 0/150(0%) Minus/Plus
Query      585  AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMXXXXXXXXXGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVP  1034
                AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMFFFGLGTLLGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVP
Subject   3967  AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMFFFGLGTLLGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVP  4416

Range 15: 4471 to 4833 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
210.8 bits(455) 0.0 118/121(98%) 0/121(0%) Minus/Plus
Query      168  NVRDVGIXXXXXXXXXXXTHSPRSVQYTYXXXXXXXXXXXXERQGDPSGSGTADAMAFVESVKKGVDDVFHQQSSGETAREVEVDDKGLLPESDIGDAPIQEGGRAVDDNTAQAAADEGHR  530
                NVRDVGI+TNGEVTGEEETHSPRSVQYTYVEEEVAPSAAVAERQGDPSGSGTADAMAFVESVKKGVDDVFHQQSSGETAREVEVDDKGLLPESDIGD PIQEGGRAVDDNTAQAAADEG R
Subject   4471  NVRDVGISTNGEVTGEEETHSPRSVQYTYVEEEVAPSAAVAERQGDPSGSGTADAMAFVESVKKGVDDVFHQQSSGETAREVEVDDKGLLPESDIGDVPIQEGGRAVDDNTAQAAADEGIR  4833

Range 16: 3703 to 3852 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
117.6 bits(251) 0.0 49/50(98%) 0/50(0%) Minus/Plus
Query     1149  FWSEVSLNDFITFVLRNKVLIGIFVASLGAAPIAWKYRRGIAANARRYAG  1298
                FWSEVSLNDF TFVLRNKVLIGIFVASLGAAPIAWKYRRGIAANARRYAG
Subject   3703  FWSEVSLNDFTTFVLRNKVLIGIFVASLGAAPIAWKYRRGIAANARRYAG  3852

Range 17: 4943 to 4999 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.1 bits(103) 0.0 18/19(95%) 0/19(0%) Minus/Plus
Query        2  PFRAPHHMSRRNPPQVLRL  58
                PFRAPHH+SRRNPPQVLRL
Subject   4943  PFRAPHHLSRRNPPQVLRL  4999

Range 18: 3699 to 4334 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
456.5 bits(990) 0.0 209/212(99%) 0/212(0%) Plus/Minus
Query      667  YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVSXXXXXXXXXXXXIPRLYFHAIGAAPKDATNIPISTLFRNTKVMKSFKETSLQKS  1302
                YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVS*L PAYLLALAAIPRLYFHAIGAAPKDATNIPISTLFRNTKV+KSFKETSLQ S
Subject   3699  YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVS*LPPAYLLALAAIPRLYFHAIGAAPKDATNIPISTLFRNTKVVKSFKETSLQNS  4334

Range 19: 4377 to 4553 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
110.1 bits(234) 0.0 59/59(100%) 0/59(0%) Plus/Minus
Query      448  VYCTLRGEWXXXXXXXXXXXXIPTSRTFVTPS*LETLEVDPSLSSPGTASC*VPDGPAP  624
                VYCTLRGEWVSSSPVTSPLVLIPTSRTFVTPS*LETLEVDPSLSSPGTASC*VPDGPAP
Subject   4377  VYCTLRGEWVSSSPVTSPLVLIPTSRTFVTPS*LETLEVDPSLSSPGTASC*VPDGPAP  4553

Range 20: 4596 to 4709 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
94.1 bits(199) 0.0 38/38(100%) 0/38(0%) Plus/Minus
Query      292  RAVSPLDCW*KTSSTPFFTLSTKAIASAVPEPDGSPCL  405
                RAVSPLDCW*KTSSTPFFTLSTKAIASAVPEPDGSPCL
Subject   4596  RAVSPLDCW*KTSSTPFFTLSTKAIASAVPEPDGSPCL  4709

Range 21: 4844 to 4906 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.1 bits(114) 0.0 21/21(100%) 0/21(0%) Plus/Minus
Query       95  QVFRTWRLLEQLLVVHSQDWT  157
                QVFRTWRLLEQLLVVHSQDWT
Subject   4844  QVFRTWRLLEQLLVVHSQDWT  4906

Range 22: 4955 to 4999 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.9 bits(72) 0.0 14/15(93%) 0/15(0%) Plus/Minus
Query        2  ES*HLGRVSPRHVVW  46
                ES*HLGRVSPR VVW
Subject   4955  ES*HLGRVSPRQVVW  4999

Grapevine leafroll associated virus 3 isolate 621, complete genome

Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 21

Range 1: 3888 to 5183 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
969.7 bits(2110) 0.0 421/432(97%) 0/432(0%) Plus/Minus
Query        3  SRNTWGGFLLDMWCGARNGXXXXXXXXXXLSRYFGLGDFWNSCWWYTLRTGLYWFPVAFVGCGLCCVVIYSSPPFLNRRITDVAFWKQPLVVHLNLTSRFPTRLLVKDIVDTFFHTFNKSHSVSGTRTRRITLSFRHSCRRGNLFLDVSVLHASR*MGLFFTSNFPVGVNPHVAHICDTIIA*DTRSGSITIVTGNRFMLSPRWTSTFVIVKVPVIPKRLIIHIPPLYRWDVSKLRYGVVKQTPYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARXXXXXXXXXL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRRHEYPDKHLIPQYESDEVI*GNFTPK  1298
                SRNTWGGFLLD WCGARNGRRRHF*FHFFLSRYFGLGDFWNSCWWYTLRTGLYWFPVAFVGCGLCCVVIYSSPPFLNRRITDVAFWKQPLVVHLNLTSRFPTRLLVKDIVDTFFHTFNKSHSVSGTRTRRITLSFRHSCRRGNLFLD+SVLHASR*MGLFFTSNFPVG NPHVAHICDTIIA*DTRSGSI IVTGNRFMLSPRWTSTFVIVKVPVIPKRLI+HIPPLYRWDVSKLRYGVVKQ PYDQRYP*RNRQ*Q*ADTLPSPNNLGN APIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV* RKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARG*TA*TTGGL*T*RA*SFVTTAR PSSVSRNSAPILPCNWGRTQRRH YPDKHLIPQYES EVI*GNFTPK
Subject   3888  SRNTWGGFLLDKWCGARNGRRRHF*FHFFLSRYFGLGDFWNSCWWYTLRTGLYWFPVAFVGCGLCCVVIYSSPPFLNRRITDVAFWKQPLVVHLNLTSRFPTRLLVKDIVDTFFHTFNKSHSVSGTRTRRITLSFRHSCRRGNLFLDISVLHASR*MGLFFTSNFPVGANPHVAHICDTIIA*DTRSGSIVIVTGNRFMLSPRWTSTFVIVKVPVIPKRLIVHIPPLYRWDVSKLRYGVVKQAPYDQRYP*RNRQ*Q*ADTLPSPNNLGNGAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*SRKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARG*TA*TTGGL*T*RA*SFVTTARAPSSVSRNSAPILPCNWGRTQRRH*YPDKHLIPQYESGEVI*GNFTPK  5183

Range 2: 4105 to 4626 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
394.2 bits(854) 0.0 168/174(97%) 0/174(0%) Plus/Minus
Query      560  KWIHHYRHREPLHAESQMDQHLRHSQSPGNT*ASHHTHSSPLPVGRKQVEVWCR*ANPL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RSQPTKTLFARLKIHRILC  1081
                KWIH YRHREPLHAESQMDQHLRHSQSPGNT*ASH THSSPLPVGRKQVEVWCR*A+PL*SKIPLA**AVTMS*HSSLAKQPRE+RTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRM+*KTIATLRGLDV*LRSP**R QPTKTLFARLKIHRILC
Subject   4105  KWIHRYRHREPLHAESQMDQHLRHSQSPGNT*ASHRTHSSPLPVGRKQVEVWCR*ASPL*SKIPLA**AVTMS*HSSLAKQPRERRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMK*KTIATLRGLDV*LRSP**RPQPTKTLFARLKIHRILC  4626

Range 3: 4669 to 4968 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
254.9 bits(550) 0.0 99/100(99%) 0/100(0%) Plus/Minus
Query      218  SPLLESAHHRCRFLEATPCRPPQPHEPFPH*TVGERHRRHLFSHFQQKP*RQRYQNPTDHLVFPPQLQTGQPLPRRKCIARFEVNGSLLHQ*LPRWC*SP  517
                SPLLESAHHRCRFLEATPCRPPQPHEPFPH*TVGERHRRHLFSHFQQKP*RQRYQNPTDHLVFPPQLQTGQPLPR KCIARFEVNGSLLHQ*LPRWC*SP
Subject   4669  SPLLESAHHRCRFLEATPCRPPQPHEPFPH*TVGERHRRHLFSHFQQKP*RQRYQNPTDHLVFPPQLQTGQPLPRHKCIARFEVNGSLLHQ*LPRWC*SP  4968

Range 4: 4946 to 5185 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
178.9 bits(384) 0.0 79/80(99%) 0/80(0%) Plus/Minus
Query        1  RVVTLGAGFSSTCGVALGTVVGGTSSFTSF*AGISDLATFGTAAGGTLSGLDCTGSLWPSSAAACAVLSSTALPPS*IGA  240
                RVVTLGAGFSST GVALGTVVGGTSSFTSF*AGISDLATFGTAAGGTLSGLDCTGSLWPSSAAACAVLSSTALPPS*IGA
Subject   4946  RVVTLGAGFSSTSGVALGTVVGGTSSFTSF*AGISDLATFGTAAGGTLSGLDCTGSLWPSSAAACAVLSSTALPPS*IGA  5185

Range 5: 3889 to 4062 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
127.1 bits(271) 0.0 55/58(95%) 0/58(0%) Plus/Minus
Query     1124  TSLEFRNYCPRTF*R*PQFRAYTSMQLGPHPKTPRISR*APYSAIRK**SHLRKLHSK  1297
                TSLEFRNYCPRTF*R*PQFRAYTSMQLGPH KTP ISR*APYSAIRK *SHLRKLHSK
Subject   3889  TSLEFRNYCPRTF*R*PQFRAYTSMQLGPHSKTPLISR*APYSAIRKW*SHLRKLHSK  4062

Range 6: 3889 to 4497 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
422.6 bits(916) 0.0 195/203(96%) 0/203(0%) Minus/Plus
Query      689  FGVKFP*MTSSLSYCGIRCLSGYSWRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGFXXXXXXXXXXXLNVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*GVCLTTPYLNLLTSH  1297
                FGVKFP*MTS LSYCGIRCLSGY WRL VRPQLHGSIGAELRLTLEG RAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGFRRL PSLGRP*LNVKSP*RCYRFL HTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGA FPRLFGEGRVSAHCYCLLR*GYL*S*G CLTTPYLNLLTSH
Subject   3889  FGVKFP*MTSPLSYCGIRCLSGY*WRL*VRPQLHGSIGAELRLTLEGARAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGFRRLWPSLGRP*LNVKSP*RCYRFLLHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGAPFPRLFGEGRVSAHCYCLLR*GYL*S*GACLTTPYLNLLTSH  4497

Range 7: 4537 to 4800 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
202.7 bits(436) 0.0 85/88(97%) 0/88(0%) Minus/Plus
Query      386  ITGTLTMTKVLVHLGLSMKRFPVTIVMDPLLVSQAMMVSQMCATWGLTPTGKLLVKKRPIHLEACNTLTSRKRLPRLQLWRKDKVIRR  649
                ITGTLTMTKVLVHLGLSMKRFPVTI MDPLLVSQAMMVSQMCATWGL PTGKLLVKKRPIHLEACNTL SRKRLPRLQLWRKDKVIRR
Subject   4537  ITGTLTMTKVLVHLGLSMKRFPVTITMDPLLVSQAMMVSQMCATWGLAPTGKLLVKKRPIHLEACNTLMSRKRLPRLQLWRKDKVIRR  4800

Range 8: 4852 to 5094 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
196.3 bits(422) 0.0 81/81(100%) 0/81(0%) Minus/Plus
Query       92  STMSFTNSLVGKRLVRLRWTTRGCFQKATSVMRRFKKGGEL*MTTQHKPQPTKATGNQYSPVLRVYHQQLFQKSPSPKYLL  334
                STMSFTNSLVGKRLVRLRWTTRGCFQKATSVMRRFKKGGEL*MTTQHKPQPTKATGNQYSPVLRVYHQQLFQKSPSPKYLL
Subject   4852  STMSFTNSLVGKRLVRLRWTTRGCFQKATSVMRRFKKGGEL*MTTQHKPQPTKATGNQYSPVLRVYHQQLFQKSPSPKYLL  5094

Range 9: 5072 to 5185 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
97.3 bits(206) 0.0 38/38(100%) 0/38(0%) Minus/Plus
Query        1  RQVRNTCSERSETRSAADDRSERHTTCRGETRPKCYDS  114
                RQVRNTCSERSETRSAADDRSERHTTCRGETRPKCYDS
Subject   5072  RQVRNTCSERSETRSAADDRSERHTTCRGETRPKCYDS  5185

Range 10: 3890 to 4882 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
729.2 bits(1585) 0.0 322/331(97%) 0/331(0%) Minus/Plus
Query      304  LE*SFLK*LHHFRIAE*GAYRDIRGVFGCGPNCMEV*ARNCG*R*KVRGQ*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGCDRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKGFA*RHHTSTCLRPTGRGEECV**DA*VLPGL*L*RRCWSIWDSA*SGSR*R**WIHF*CLKL*WCHKCARRGD*HQRGSYW*RRDPFTSKRAIHLRRGRGCPVCSCGGKTR*SVGFWYR*RYGFXXXXXXXXXXCLSPTV*W  1296
                LE*SFLK*LHHFRIAE*GAYRDI GVF CGPNCMEV*ARNCG*R*KVRGQ*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGC RH*GDRS*TSSPLSVAIVFY IRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVR SRGCLAREECQLIVTAYYARGIFDHKG A*RHHTSTCLRPTGRGEECV *DA*VLPGL*L*RRCWSIWDSA*SGSR*R* WIHF*CLKL*WCHKCARRGD*HQRGSYW*RRDPFTSKRAIHL RGRGCPVCSCGGKTR*SVGFWYR*RYGFC*KCEKRCRRCLSPTV*W
Subject   3890  LE*SFLK*LHHFRIAE*GAYRDISGVFECGPNCMEV*ARNCG*R*KVRGQ*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGCGRH*GDRS*TSSPLSVAIVFYFIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRRSRGCLAREECQLIVTAYYARGIFDHKGLA*RHHTSTCLRPTGRGEECVR*DA*VLPGL*L*RRCWSIWDSA*SGSR*R*RWIHF*CLKL*WCHKCARRGD*HQRGSYW*RRDPFTSKRAIHLCRGRGCPVCSCGGKTR*SVGFWYR*RYGFC*KCEKRCRRCLSPTV*W  4882

Range 11: 5085 to 5183 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.6 bits(159) 0.0 32/33(97%) 0/33(0%) Minus/Plus
Query        3  IPAQKEVKLEVPPTTVPSATPHVEEKPAPSVTT  101
                IPAQKEVKLEVPPTTVPSATP VEEKPAPSVTT
Subject   5085  IPAQKEVKLEVPPTTVPSATPLVEEKPAPSVTT  5183

Range 12: 4919 to 4969 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.8 bits(85) 0.0 17/17(100%) 0/17(0%) Minus/Plus
Query      217  VASRKRHR*CADSRRGE  267
                VASRKRHR*CADSRRGE
Subject   4919  VASRKRHR*CADSRRGE  4969

Range 13: 4152 to 4601 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
332.4 bits(721) 0.0 149/150(99%) 0/150(0%) Minus/Plus
Query      585  AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMXXXXXXXXXGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVP  1034
                AV VTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMFFFGLGTLLGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVP
Subject   4152  AVAVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMFFFGLGTLLGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVP  4601

Range 14: 4656 to 5018 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
217.7 bits(470) 0.0 120/121(99%) 0/121(0%) Minus/Plus
Query      168  NVRDVGIXXXXXXXXXXXTHSPRSVQYTYXXXXXXXXXXXXERQGDPSGSGTADAMAFVESVKKGVDDVFHQQSSGETAREVEVDDKGLLPESDIGDAPIQEGGRAVDDNTAQAAADEGHR  530
                NVRDVGI+TNGEVTGEEETHSPRSVQYTYVEEEVAPSAAVAERQGDPSGSGTADAMAFVESVKKGVDDVFHQQSSGETAREVEVDDKGLLPESDIGDAPIQEGGRAVDDNTAQAAADEGHR
Subject   4656  NVRDVGISTNGEVTGEEETHSPRSVQYTYVEEEVAPSAAVAERQGDPSGSGTADAMAFVESVKKGVDDVFHQQSSGETAREVEVDDKGLLPESDIGDAPIQEGGRAVDDNTAQAAADEGHR  5018

Range 15: 3888 to 4037 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
108.0 bits(230) 0.0 46/50(92%) 0/50(0%) Minus/Plus
Query     1149  FWSEVSLNDFITFVLRNKVLIGIFVASLGAAPIAWKYRRGIAANARRYAG  1298
                FWSEVSLNDF TFVLRNKVLIGI VASL AAPIAWKYRRGIAANARR AG
Subject   3888  FWSEVSLNDFTTFVLRNKVLIGILVASLSAAPIAWKYRRGIAANARRCAG  4037

Range 16: 5128 to 5184 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.1 bits(103) 0.0 18/19(95%) 0/19(0%) Minus/Plus
Query        2  PFRAPHHMSRRNPPQVLRL  58
                PFRAPHH+SRRNPPQVLRL
Subject   5128  PFRAPHHLSRRNPPQVLRL  5184

Range 17: 3884 to 4519 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
450.1 bits(976) 0.0 207/212(98%) 0/212(0%) Plus/Minus
Query      667  YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVSXXXXXXXXXXXXIPRLYFHAIGAAPKDATNIPISTLFRNTKVMKSFKETSLQKS  1302
                YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVT TADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVS*LLPA+LLALAAIPRLYFHAIGAA KDATNIPISTLFRNTKV+KSFKETSLQ S
Subject   3884  YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTATADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVS*LLPAHLLALAAIPRLYFHAIGAALKDATNIPISTLFRNTKVVKSFKETSLQNS  4519

Range 18: 4562 to 4738 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
110.1 bits(234) 0.0 59/59(100%) 0/59(0%) Plus/Minus
Query      448  VYCTLRGEWXXXXXXXXXXXXIPTSRTFVTPS*LETLEVDPSLSSPGTASC*VPDGPAP  624
                VYCTLRGEWVSSSPVTSPLVLIPTSRTFVTPS*LETLEVDPSLSSPGTASC*VPDGPAP
Subject   4562  VYCTLRGEWVSSSPVTSPLVLIPTSRTFVTPS*LETLEVDPSLSSPGTASC*VPDGPAP  4738

Range 19: 4781 to 4894 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
94.1 bits(199) 0.0 38/38(100%) 0/38(0%) Plus/Minus
Query      292  RAVSPLDCW*KTSSTPFFTLSTKAIASAVPEPDGSPCL  405
                RAVSPLDCW*KTSSTPFFTLSTKAIASAVPEPDGSPCL
Subject   4781  RAVSPLDCW*KTSSTPFFTLSTKAIASAVPEPDGSPCL  4894

Range 20: 5029 to 5091 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.1 bits(114) 0.0 21/21(100%) 0/21(0%) Plus/Minus
Query       95  QVFRTWRLLEQLLVVHSQDWT  157
                QVFRTWRLLEQLLVVHSQDWT
Subject   5029  QVFRTWRLLEQLLVVHSQDWT  5091

Range 21: 5140 to 5184 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.9 bits(72) 0.0 14/15(93%) 0/15(0%) Plus/Minus
Query        2  ES*HLGRVSPRHVVW  46
                ES*HLGRVSPR VVW
Subject   5140  ES*HLGRVSPRQVVW  5184

Nucleotide Sequence (501 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 73 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
51
102
153
204
255
306
357
408
459
501

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
380.5 2158.8 29% 8.381e-104 97% KM058745.1
316.8 790.4 44% 1.248e-84 37% JX266782.1
319.5 828.6 23% 1.856e-85 37% JQ796828.1
309.0 646.1 31% 2.786e-82 39% JQ655295.1
309.0 650.2 31% 2.786e-82 40% JQ655296.1

Alignments

Grapevine leafroll associated virus 3 isolate GH24, complete genome

Sequence ID: KM058745.1 Length: 18493 Number of Matches: 10

Range 1: 2532 to 3005 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
380.5 bits(824) 0.0 158/158(100%) 0/158(0%) Minus/Plus
Query        1  VLQVAEAMDKKGCLAFDIALMFPIELLYGNGEVYLEDVDTLVVREGDALTYNVGMCGEVYVHSFANVSGFFTNAYVRASSRNVYKLEYEGCRCGYHHFTMCRAQKLQSAEVTQRSIVPTFLGKSIVFLPVVDGTKVCFKSLVLDSDFVDRIYSYALNT  474
                VLQVAEAMDKKGCLAFDIALMFPIELLYGNGEVYLEDVDTLVVREGDALTYNVGMCGEVYVHSFANVSGFFTNAYVRASSRNVYKLEYEGCRCGYHHFTMCRAQKLQSAEVTQRSIVPTFLGKSIVFLPVVDGTKVCFKSLVLDSDFVDRIYSYALNT
Subject   2532  VLQVAEAMDKKGCLAFDIALMFPIELLYGNGEVYLEDVDTLVVREGDALTYNVGMCGEVYVHSFANVSGFFTNAYVRASSRNVYKLEYEGCRCGYHHFTMCRAQKLQSAEVTQRSIVPTFLGKSIVFLPVVDGTKVCFKSLVLDSDFVDRIYSYALNT  3005

Range 2: 2528 to 3004 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
366.7 bits(794) 0.0 158/159(99%) 0/159(0%) Plus/Minus
Query        2  VLRA*E*ILSTKSESRTKDLKHTLVPSTTGKNTIDLPRNVGTMDLCVTSALCNF*ALHIVK*WYPHRQPSYSSLYTFLEEART*ALVKKPLTLAKEWT*TSPHMPTL*VNASPSRTTNVSTSSRYTSPFPYNNSIGNMRAISKARHPFLSIASATCNTN  478
                VLRA*E*ILSTKSESRTKDLKHTLVPSTTGKNTIDLPRNVGTMDLCVTSALCNF*ALHIVK*WYPHRQPSYSSLYTFLEEART*ALVKKPLTLAKEWT*TSPHMPTL*VNASPSRTTNVSTSSRYTSPFPYNNSIGNMRAISKARHPFLSIASATCNT+
Subject   2528  VLRA*E*ILSTKSESRTKDLKHTLVPSTTGKNTIDLPRNVGTMDLCVTSALCNF*ALHIVK*WYPHRQPSYSSLYTFLEEART*ALVKKPLTLAKEWT*TSPHMPTL*VNASPSRTTNVSTSSRYTSPFPYNNSIGNMRAISKARHPFLSIASATCNTD  3004

Range 3: 2509 to 2529 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
22.1 bits(42) 0.0 7/7(100%) 0/7(0%) Plus/Minus
Query      480  TYRRHQP  500
                TYRRHQP
Subject   2509  TYRRHQP  2529

Range 4: 2532 to 3002 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
366.7 bits(794) 0.0 156/157(99%) 0/157(0%) Plus/Minus
Query        4  VEGVRIDSVNKIRIQNQRLKAHLGPINNRQKHDRFTKKRGDNGPLRNLRALQLLSSAHREVMVPTPATLVLQLIHISRRSTDVGVGKEAAYVGEGMDINFSAHANIVS*RIPFPNYQRVDVL*VHLPISIQQFDREHEGYIKGQTPLLIHSLGDLQY  474
                VEGVRIDSVN+IRIQNQRLKAHLGPINNRQKHDRFTKKRGDNGPLRNLRALQLLSSAHREVMVPTPATLVLQLIHISRRSTDVGVGKEAAYVGEGMDINFSAHANIVS*RIPFPNYQRVDVL*VHLPISIQQFDREHEGYIKGQTPLLIHSLGDLQY
Subject   2532  VEGVRIDSVNEIRIQNQRLKAHLGPINNRQKHDRFTKKRGDNGPLRNLRALQLLSSAHREVMVPTPATLVLQLIHISRRSTDVGVGKEAAYVGEGMDINFSAHANIVS*RIPFPNYQRVDVL*VHLPISIQQFDREHEGYIKGQTPLLIHSLGDLQY  3002

Range 5: 2758 to 3003 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
207.7 bits(447) 0.0 81/82(99%) 0/82(0%) Plus/Minus
Query        3  C*GRKNRFCQQNPNPEPKT*STPWSHQQQAKTR*IYQETWGQWTFA*PPRSATFELCTS*SDGTHTGNPRTPAYTHF*KKHG  248
                C*GRKNRFCQ+NPNPEPKT*STPWSHQQQAKTR*IYQETWGQWTFA*PPRSATFELCTS*SDGTHTGNPRTPAYTHF*KKHG
Subject   2758  C*GRKNRFCQRNPNPEPKT*STPWSHQQQAKTR*IYQETWGQWTFA*PPRSATFELCTS*SDGTHTGNPRTPAYTHF*KKHG  3003

Range 6: 2530 to 2718 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
164.2 bits(352) 0.0 63/63(100%) 0/63(0%) Plus/Minus
Query      288  NGHKLLRTCQHCKLTHPLPELPTCRRPLGTPPHFHTTIRSGT*GLYQRPDTPSYP*PRRLAIR  476
                NGHKLLRTCQHCKLTHPLPELPTCRRPLGTPPHFHTTIRSGT*GLYQRPDTPSYP*PRRLAIR
Subject   2530  NGHKLLRTCQHCKLTHPLPELPTCRRPLGTPPHFHTTIRSGT*GLYQRPDTPSYP*PRRLAIR  2718

Range 7: 2761 to 3003 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.9 bits(419) 0.0 80/81(99%) 0/81(0%) Minus/Plus
Query        3  VLLLEMCISWSTRVAGVGTITSRCAELKSCRARRLRKGPLSPRFLVNLSCFCLLLMGPRCALSLWFWIRILLTESILTPST  245
                VLLLEMCISWSTRVAGVGTITSRCAELKSCRARRLRKGPLSPRFLVNLSCFCLLLMGPRCALSLWFWIRI LTESILTPST
Subject   2761  VLLLEMCISWSTRVAGVGTITSRCAELKSCRARRLRKGPLSPRFLVNLSCFCLLLMGPRCALSLWFWIRISLTESILTPST  3003

Range 8: 2533 to 2718 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
156.4 bits(335) 0.0 62/62(100%) 0/62(0%) Minus/Plus
Query      288  YCKSPRLWIRRGVWPLI*PSCSRSNCCMEMGRCT*RTSTRW*FGKGMR*LTMLACAEKFMSI  473
                YCKSPRLWIRRGVWPLI*PSCSRSNCCMEMGRCT*RTSTRW*FGKGMR*LTMLACAEKFMSI
Subject   2533  YCKSPRLWIRRGVWPLI*PSCSRSNCCMEMGRCT*RTSTRW*FGKGMR*LTMLACAEKFMSI  2718

Range 9: 2672 to 3004 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
220.1 bits(474) 0.0 110/111(99%) 0/111(0%) Minus/Plus
Query        2  CVNLQCWHVRRSLCPFXXXXXXXXXXXXRPCFF*KCV*AGVRGLPVWVPSLHDVQSSKVAERGGYAKVHCPHVSW*IYRVFACC*WDQGVL*VXXXXXXFC*QNLFLRPQH  334
                CVNLQCWHVRRSLCPFLRQRKRLLYQRLRPCFF*KCV*AGVRGLPVWVPSLHDVQSSKVAERGGYAKVHCPHVSW*IYRVFACC*WDQGVL*VFGSGFGF *QNLFLRPQH
Subject   2672  CVNLQCWHVRRSLCPFLRQRKRLLYQRLRPCFF*KCV*AGVRGLPVWVPSLHDVQSSKVAERGGYAKVHCPHVSW*IYRVFACC*WDQGVL*VFGSGFGFR*QNLFLRPQH  3004

Range 10: 2528 to 2623 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.4 bits(167) 0.0 31/32(97%) 0/32(0%) Minus/Plus
Query      383  IRIASRRGYG*EGVSGL*YSPHVPDRIVVWKW  478
                +RIASRRGYG*EGVSGL*YSPHVPDRIVVWKW
Subject   2528  VRIASRRGYG*EGVSGL*YSPHVPDRIVVWKW  2623

Grapevine leafroll associated virus 3m isolate 139, complete genome

Sequence ID: JX266782.1 Length: 18475 Number of Matches: 6

Range 1: 2311 to 2778 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
316.8 bits(685) 0.0 127/156(81%) 0/156(0%) Minus/Plus
Query        1  QVAEAMDKKGCLAFDIALMFPIELLYGNGEVYLEDVDTLVVREGDALTYNVGMCGEVYVHSFANVSGFFTNAYVRASSRNVYKLEYEGCRCGYHHFTMCRAQKLQSAEVTQRSIVPTFLGKSIVFLPVVDGTKVCFKSLVLDSDFVDRIYSYALNT  468
                QVAEAMD+KGCLAFD+ALMFP+ELLYGNGEV LE++DTLV REGD + Y+VG CGEVY HSF +VSGFFTNAYVR SS +VYK+EYEG RCGYHHFTMCRAQKLQ  EVT+RS+VPTF GKS+VFLP+VDGTKV FKS+VLDSDFVDRIYSYALNT
Subject   2311  QVAEAMDRKGCLAFDVALMFPVELLYGNGEVLLEELDTLVRREGDRIFYSVGQCGEVYEHSFTDVSGFFTNAYVRVSSGSVYKVEYEGYRCGYHHFTMCRAQKLQDVEVTRRSLVPTFAGKSVVFLPIVDGTKVNFKSIVLDSDFVDRIYSYALNT  2778

Range 2: 2301 to 2777 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
222.8 bits(480) 0.0 107/159(67%) 0/159(0%) Plus/Minus
Query        2  VLRA*E*ILSTKSESRTKDLKHTLVPSTTGKNTIDLPRNVGTMDLCVTSALCNF*ALHIVK*WYPHRQPSYSSLYTFLEEART*ALVKKPLTLAKEWT*TSPHMPTL*VNASPSRTTNVSTSSRYTSPFPYNNSIGNMRAISKARHPFLSIASATCNTN  478
                VL A*E*ILSTKSES T DLK T VPST GK T DLP  VGT DL VTS  C+F ALHIVK   PH  PSYS+L T  E+ RT*A VK PLT  KE +*TSPH PTL*   SPSR T VS+SS+ TSPFPY +S GN+RA SKA+ PFLSIASATC+ +
Subject   2301  VLSA*E*ILSTKSESNTIDLKFTFVPSTIGKKTTDLPAKVGTNDLRVTSTSCSFWALHIVKW**PHLYPSYSTL*TLPEDTRT*AFVKNPLTSVKECS*TSPHWPTL*NMRSPSRLTKVSSSSKRTSPFPYKSSTGNIRATSKAKQPFLSIASATCHAD  2777

Range 3: 2311 to 2775 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
122.5 bits(261) 0.0 60/155(39%) 0/155(0%) Plus/Minus
Query        4  VEGVRIDSVNKIRIQNQRLKAHLGPINNRQKHDRFTKKRGDNGPLRNLRALQLLSSAHREVMVPTPATLVLQLIHISRRSTDVGVGKEAAYVGEGMDINFSAHANIVS*RIPFPNYQRVDVL*VHLPISIQQFDREHEGYIKGQTPLLIHSLGDL  468
                V+ V I+ +++IRIQ  RLK +  P++ RQ+      K G+  P R+   LQLL   H +V++  P   +L LI+  R  T V + KE  +V EGM INF+  A+ +   I F  +Q V  L* +L +S+Q+F+REH+G I+    L IH L +L
Subject   2311  VKCVGINPIDEIRIQYDRLKIYFRPVDYRQEDHGLASKGGN*RPARHFNVLQLLGPTHSKVVIAAPIPFILHLINTPRGHTYVSIRKEPTHVCEGMFINFTTLADAIKYAITFAPHQSVKFL*KNLTVSVQEFNREHKGNIES*ATLSIHRLCNL  2775

Range 4: 2555 to 2743 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.5 bits(82) 0.0 23/63(37%) 0/63(0%) Minus/Plus
Query       36  ISWSTRVAGVGTITSRCAELKSCRARRLRKGPLSPRFLVNLSCFCLLLMGPRCALSLWFWIRI  224
                I WS +  G    T  C   KSCR  + R G   P  L +    CL   G +  LSL +WI I
Subject   2555  IRWSMKGIGAAITTLLCVGPKSCRTLK*RAGR*FPPLLASPWSSCL*STGRK*ILSLSYWILI  2743

Range 5: 2321 to 2491 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.7 bits(76) 0.0 23/57(40%) 0/57(0%) Minus/Plus
Query      288  RLWIRRGVWPLI*PSCSRSNCCMEMGRCT*RTSTRW*FGKGMR*LTMLACAEKFMSI  458
                R WI R     + P CSR N C E  R  *R  T W*  K +      A   KFM+I
Subject   2321  RRWIERVA*LSMLPLCSRLNSCTETVRFF*RNLTLW*GAKVIAYFIASASVVKFMNI  2491

Range 6: 2303 to 2491 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.1 bits(103) 0.0 24/63(38%) 0/63(0%) Plus/Minus
Query      288  NGHKLLRTCQHCKLTHPLPELPTCRRPLGTPPHFHTTIRSGT*GLYQRPDTPSYP*PRRLAIR  476
                N HKL  T +  K+   L   P C+ PL  P  F T ++ GT*G +++   P YP P + A R
Subject   2303  NVHKLHHTGRRYKICDHLRASPKCQVPLKEPHRFRTRVQPGT*GQHRKLSNPFYPSPLQPATR  2491

Grapevine leafroll associated virus 3 clone 3, complete genome

Sequence ID: JQ796828.1 Length: 18552 Number of Matches: 7

Range 1: 2538 to 3005 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
319.5 bits(691) 0.0 126/156(81%) 0/156(0%) Minus/Plus
Query        1  QVAEAMDKKGCLAFDIALMFPIELLYGNGEVYLEDVDTLVVREGDALTYNVGMCGEVYVHSFANVSGFFTNAYVRASSRNVYKLEYEGCRCGYHHFTMCRAQKLQSAEVTQRSIVPTFLGKSIVFLPVVDGTKVCFKSLVLDSDFVDRIYSYALNT  468
                QVAEAMD+KGCL FD+ALMFPIELLYGNGEVYLE++DTLV REG+ LTYNVG CGEVY HSFA VSGFFTNAY+R SS   YKLEYEG RCGYHHFTMCRAQK Q +E+TQRS+VPTF+GKS+VFLP+V+GT V FKS+VLDSDFVDR+YSYALNT
Subject   2538  QVAEAMDRKGCLVFDLALMFPIELLYGNGEVYLEELDTLVKREGERLTYNVGQCGEVYEHSFAKVSGFFTNAYIRVSSGAAYKLEYEGYRCGYHHFTMCRAQKAQGSEITQRSLVPTFVGKSVVFLPIVEGTNVSFKSIVLDSDFVDRVYSYALNT  3005

Range 2: 2537 to 3004 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
221.5 bits(477) 0.0 110/156(71%) 0/156(0%) Plus/Minus
Query        2  VLRA*E*ILSTKSESRTKDLKHTLVPSTTGKNTIDLPRNVGTMDLCVTSALCNF*ALHIVK*WYPHRQPSYSSLYTFLEEART*ALVKKPLTLAKEWT*TSPHMPTL*VNASPSRTTNVSTSSRYTSPFPYNNSIGNMRAISKARHPFLSIASATC  469
                VLRA*E* LSTKSESRT DLK TLVPST GK T DLP NVGT DL V S  C F ALHIVK   PH  PSYSSLY   EE R  A VKKPLTLAKE +*TSPH PTL V  SPS  T VS+SS+ TSPFPY +SIGN+RA SK +HP  SIASATC
Subject   2537  VLRA*E*TLSTKSESRTIDLKLTLVPSTIGKKTTDLPTNVGTKDL*VISDPCAFWALHIVKW**PHL*PSYSSLYAAPEETRMYAFVKKPLTLAKECS*TSPH*PTLYVRRSPSLFTKVSSSSK*TSPFPYRSSIGNIRARSKTKHPLRSIASATC  3004

Range 3: 2538 to 3002 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
140.4 bits(300) 0.0 62/155(40%) 0/155(0%) Plus/Minus
Query        4  VEGVRIDSVNKIRIQNQRLKAHLGPINNRQKHDRFTKKRGDNGPLRNLRALQLLSSAHREVMVPTPATLVLQLIHISRRSTDVGVGKEAAYVGEGMDINFSAHANIVS*RIPFPNYQRVDVL*VHLPISIQQFDREHEGYIKGQTPLLIHSLGDL  468
                ++G+ I+ +N++RI + R KA +GP+ N Q++ R T +R D  PL + R+L+LL   HREV++  P T +LQ I  +RR  DV + KE A+ G+GM INF     ++     FP +  + +L V L I IQ+F+ EH+  ++ QTPL IH   +L
Subject   2538  IKGIGINPINEVRI*DDRFKADVGPLYNWQENHRLTYERWDQRPLSDFRSLRLLGPTHREVVITAPITFILQFICSARRDADVCIRKETAHFGKGMFINFPTLTYVIRQTFTFPLH*SI*LLQVDLAIPIQKFNWEHKS*VENQTPLTIHRFSNL  3002

Range 4: 2759 to 2998 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.0 bits(81) 0.0 31/80(39%) 0/80(0%) Minus/Plus
Query        8  PCFF*KCV*AGVRGLPVWVPSLHDVQSSKVAERGGYAKVHCPHVSW*IYRVFACC*WDQGVL*VXXXXXXFC*QNLFLRP  247
                P  F +C+* GV  L V +  LHDV   + A  G +++V  P+V  *+    A C  DQ  L*+    FG  *  LFL P
Subject   2759  PRLFWRCI*TGV*RL*VRLSPLHDV*GPEGARIGNHSEVFGPNVRR*VGGFLANCRGDQRQL*IDRPRFGLR**GLFLCP  2998

Range 5: 2554 to 2643 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.4 bits(71) 0.0 16/30(53%) 0/30(0%) Minus/Plus
Query      363  WIRRGVWPLI*PSCSRSNCCMEMGRCT*RT  452
                WI RGVW   *  CS+ N CM M R T R+
Subject   2554  WIVRGVWFST*LLCSQLNFCMGMARSTWRS  2643

Range 6: 2758 to 3000 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
39.6 bits(80) 0.0 30/81(37%) 0/81(0%) Plus/Minus
Query        6  *GRKNRFCQQNPNPEPKT*STPWSHQQQAKTR*IYQETWGQWTFA*PPRSATFELCTS*SDGTHTGNPRTPAYTHF*KKHG  248
                *G +N+  Q++PN     *S  WS  Q A+    Y  T G  T  * P  A     TS*S    T N  TP Y    K+ G
Subject   2758  *GHRNKPYQRSPNLGRSI*S*RWSPLQLARKPPTYLRTLGPKTSE*FPILAPSGPYTS*SGDNRTYNLHTPVYMQRQKRRG  3000

Range 7: 2554 to 2640 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
32.2 bits(64) 0.0 13/29(45%) 0/29(0%) Plus/Minus
Query      366  PLGTPPHFHTTIRSGT*GLYQRPDTPSYP  452
                P   P H HT ++ GT* L ++P+TP  P
Subject   2554  PPSRPRHSHTEVQLGT*ELGRKPNTPYDP  2640

Grapevine leafroll associated virus 3 isolate GH11, complete genome

Sequence ID: JQ655295.1 Length: 18671 Number of Matches: 3

Range 1: 2538 to 3005 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
309.0 bits(668) 0.0 123/156(79%) 0/156(0%) Minus/Plus
Query        1  QVAEAMDKKGCLAFDIALMFPIELLYGNGEVYLEDVDTLVVREGDALTYNVGMCGEVYVHSFANVSGFFTNAYVRASSRNVYKLEYEGCRCGYHHFTMCRAQKLQSAEVTQRSIVPTFLGKSIVFLPVVDGTKVCFKSLVLDSDFVDRIYSYALNT  468
                QVAEAMD KGCL FD+ALMFPIELLYGNGEV LE++DTLV REG+ LTYNVG CGEVY HS+  VSGFFTNAY+R SS   YKLEYEG RCGYHHFTMCRAQK Q +E TQRS+VPTF+GKS+VFLP+V+GT V FKS+VLDSDFVDR+YSYALNT
Subject   2538  QVAEAMDLKGCLVFDLALMFPIELLYGNGEVCLEELDTLVKREGERLTYNVGQCGEVYEHSYTKVSGFFTNAYIRVSSGAAYKLEYEGYRCGYHHFTMCRAQKAQGSETTQRSLVPTFVGKSVVFLPIVEGTSVSFKSIVLDSDFVDRVYSYALNT  3005

Range 2: 2537 to 3004 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
216.0 bits(465) 0.0 106/156(68%) 0/156(0%) Plus/Minus
Query        2  VLRA*E*ILSTKSESRTKDLKHTLVPSTTGKNTIDLPRNVGTMDLCVTSALCNF*ALHIVK*WYPHRQPSYSSLYTFLEEART*ALVKKPLTLAKEWT*TSPHMPTL*VNASPSRTTNVSTSSRYTSPFPYNNSIGNMRAISKARHPFLSIASATC  469
                VLRA E* LSTKSESRT DLK TLVPST GK T DLP NVGT DL V S  C F ALHIVK   PH  PSYSSLY   +E R  A VKKPLTL  E +*TSPH PTL V  SPS  T VS+SS+ TSPFPY +SIGN+RA SK +HP  SIASATC
Subject   2537  VLRAYE*TLSTKSESRTIDLKLTLVPSTIGKKTTDLPTNVGTKDLWVVSDPCAFWALHIVKW**PHL*PSYSSLYAAPDETRMYAFVKKPLTLV*ECS*TSPHWPTLYVRRSPSLFTKVSSSSKQTSPFPYRSSIGNIRAKSKTKHPLRSIASATC  3004

Range 3: 2538 to 3005 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
121.1 bits(258) 0.0 61/156(39%) 0/156(0%) Plus/Minus
Query        1  CVEGVRIDSVNKIRIQNQRLKAHLGPINNRQKHDRFTKKRGDNGPLRNLRALQLLSSAHREVMVPTPATLVLQLIHISRRSTDVGVGKEAAYVGEGMDINFSAHANIVS*RIPFPNYQRVDVL*VHLPISIQQFDREHEGYIKGQTPLLIHSLGDL  468
                CVE +RI+ ++KIRI + R KA   P+NN  ++ R T +R D  PL   R+L+LL  AH E+++    T VL  I  +R   DV V KE  + G GM ++F   A+++     FP +  + +L   L I IQ+F+ EH+  I+ QTPL IH   +L
Subject   2538  CVESIRINPIDKIRI*DDRFKADASPLNNW*ENHRLTYERWDQRPLGCFRSLRLLGPAHCEMVITASITFVL*FICRTR*DADVCVRKETTHFGIGMFVDFPTLAHVIRQTFTFPLH*SI*LLQTDLAIPIQKFNWEHKS*IENQTPLKIHRFSNL  3005

Grapevine leafroll associated virus 3 isolate GH30, complete genome

Sequence ID: JQ655296.1 Length: 18576 Number of Matches: 3

Range 1: 2443 to 2910 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
309.0 bits(668) 0.0 123/156(79%) 0/156(0%) Minus/Plus
Query        1  QVAEAMDKKGCLAFDIALMFPIELLYGNGEVYLEDVDTLVVREGDALTYNVGMCGEVYVHSFANVSGFFTNAYVRASSRNVYKLEYEGCRCGYHHFTMCRAQKLQSAEVTQRSIVPTFLGKSIVFLPVVDGTKVCFKSLVLDSDFVDRIYSYALNT  468
                QVAEAMD KGCL FD+ALMFPIELLYGNGEV LE++DTLV REG+ LTYNVG CGEVY HS+  VSGFFTNAY+R SS   YKLEYEG RCGYHHFTMCRAQK Q +E TQRS+VPTF+GKS+VFLP+V+GT V FKS+VLDSDFVDR+YSYALNT
Subject   2443  QVAEAMDLKGCLVFDLALMFPIELLYGNGEVCLEELDTLVKREGERLTYNVGQCGEVYEHSYTKVSGFFTNAYIRVSSGAAYKLEYEGYRCGYHHFTMCRAQKAQGSETTQRSLVPTFVGKSVVFLPIVEGTSVSFKSIVLDSDFVDRVYSYALNT  2910

Range 2: 2442 to 2909 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
216.0 bits(465) 0.0 106/156(68%) 0/156(0%) Plus/Minus
Query        2  VLRA*E*ILSTKSESRTKDLKHTLVPSTTGKNTIDLPRNVGTMDLCVTSALCNF*ALHIVK*WYPHRQPSYSSLYTFLEEART*ALVKKPLTLAKEWT*TSPHMPTL*VNASPSRTTNVSTSSRYTSPFPYNNSIGNMRAISKARHPFLSIASATC  469
                VLRA E* LSTKSESRT DLK TLVPST GK T DLP NVGT DL V S  C F ALHIVK   PH  PSYSSLY   +E R  A VKKPLTL  E +*TSPH PTL V  SPS  T VS+SS+ TSPFPY +SIGN+RA SK +HP  SIASATC
Subject   2442  VLRAYE*TLSTKSESRTIDLKLTLVPSTIGKKTTDLPTNVGTKDLWVVSDPCAFWALHIVKW**PHL*PSYSSLYAAPDETRMYAFVKKPLTLV*ECS*TSPHWPTLYVRRSPSLFTKVSSSSKQTSPFPYRSSIGNIRAKSKTKHPLRSIASATC  2909

Range 3: 2443 to 2910 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
125.2 bits(267) 0.0 62/156(40%) 0/156(0%) Plus/Minus
Query        1  CVEGVRIDSVNKIRIQNQRLKAHLGPINNRQKHDRFTKKRGDNGPLRNLRALQLLSSAHREVMVPTPATLVLQLIHISRRSTDVGVGKEAAYVGEGMDINFSAHANIVS*RIPFPNYQRVDVL*VHLPISIQQFDREHEGYIKGQTPLLIHSLGDL  468
                CVE +RI+ ++KIRI + R KA   P+NN  ++ R T +R D  PL   R+L+LL  AH E+++    T VLQ I  +R   DV V KE  + G GM ++F   A+++     FP +  + +L   L I IQ+F+ EH+  I+ QTPL IH   +L
Subject   2443  CVESIRINPIDKIRI*DDRFKADASPLNNW*ENHRLTYERWDQRPLGCFRSLRLLGPAHCEMVITASITFVLQFICRTR*DADVCVRKETTHFGIGMFVDFPTLAHVIRQTFTFPLH*SI*LLQTDLAIPIQKFNWEHKS*IENQTPLKIHRFSNL  2910