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Queries

Nucleotide Sequence (576 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 3 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
58
116
174
232
290
348
406
464
522
576

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
149.4 149.4 33% 3.151e-37 40% ADG21213

Alignments

RNA-dependent RNA polymerase [Verticillium dahliae chrysovirus 1]

Sequence ID: gb|ADG21213.1| Length: 1108 Number of Matches: 1

Range 1: 249 to 436 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
149.4 bits(376) 0.0 77/191(40%) 5/191(3%) Plus/Plus
Query       10  PRWVLEGDMP--QDFNLLDVVVMFIEGQVPKECVDYYVRLLGLKSAQGFGITKDDWAGVCAKISYGIEPPTQKLDVTDYTNVNEQFPFRSNLERLRANMTIRRMVKVFNIWEHEDCRDIAQYHIGDGNTFVTGLLLHWKGLMQHSGVHNVVRNWYKVSYDKWSDTFKALHNLVRTSNWLFDMPLNEVTRQN  576
                P WVL+G  P  +D ++ ++V ++  G +P++ VDYYV L    ++  FG+T +DW  V A+++ GI  P Q  DV    ++ E FP R   E  RAN+T+RR+ + F IWEH D  D+  +H+G+ + FV+GL+  WKGLM      ++V  W+ VSYD W+   KA+H LVRTS +L    + E  RQ+
Subject    249  PEWVLQGKPPIDRDIDMAELVRLYDSGIIPRQAVDYYVNLGYTTTSLDFGVTLNDWGPVMAQVADGIGEP-QDFDVNG--DMVEIFPPREPKELSRANVTMRRLDETFAIWEHSDVYDMCSFHVGEPHVFVSGLVTAWKGLMVKLKYAHLVAPWFCVSYDHWTKAMKAVHTLVRTSRFLMSTEITEDERQS  436

Nucleotide Sequence (304 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 3 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
31
62
93
124
155
186
217
248
279
304

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
103.2 103.2 33% 1.719e-22 50% ADG21213

Alignments

RNA-dependent RNA polymerase [Verticillium dahliae chrysovirus 1]

Sequence ID: gb|ADG21213.1| Length: 1108 Number of Matches: 1

Range 1: 759 to 859 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
103.2 bits(256) 0.0 51/101(50%) 0/101(0%) Plus/Plus
Query        2  DVDEAFTDGADPLRVLHIMNGIGFDAKMIKQMIAGKSEFFRVTITEEGTFASVTRGLASFCAGDWETSGRTTIREKVQSTLDQVSKLVRRGLDHEIGNILI  304
                D+D A  +     + + IM+ + F+A   KQM + ++EFFR TIT    +AS TR LASFCAGDWE SG  T+ E+V + LDQV KL RRGLD E GN L+
Subject    759  DIDSALDNAPAMGKFMAIMDNMLFNANAWKQMFSTRTEFFRNTITSGRAYASPTRALASFCAGDWEGSGNMTMGERVINILDQVGKLTRRGLDQEFGNGLV  859

Nucleotide Sequence (398 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 3 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
40
80
120
160
200
240
280
320
360
398

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
100.5 100.5 32% 3.724e-21 39% ADG21213

Alignments

RNA-dependent RNA polymerase [Verticillium dahliae chrysovirus 1]

Sequence ID: gb|ADG21213.1| Length: 1108 Number of Matches: 1

Range 1: 264 to 387 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
100.5 bits(249) 0.0 49/127(39%) 3/127(2%) Plus/Plus
Query       10  NLYDVVKMNESGMVPKE*VDYYVKEFESVSYEGFGTTLNDWAKLCARVAAEIEDPKPGFTLEDKDDVNELFPFGSVRERNRANCTVRRLMKVFKIQKHKEVVDIMSLHVGQRIIFVTSVIAAWKGLL  390
                ++ ++V++ +SG++P++ VDYYV    + +   FG TLNDW  + A+VA  I +P+     +   D+ E+FP    +E +RAN T+RRL + F I +H +V D+ S HVG+  +FV+ ++ AWKGL+
Subject    264  DMAELVRLYDSGIIPRQAVDYYVNLGYTTTSLDFGVTLNDWGPVMAQVADGIGEPQ---DFDVNGDMVEIFPPREPKELSRANVTMRRLDETFAIWEHSDVYDMCSFHVGEPHVFVSGLVTAWKGLM  387