Queries
Nucleotide Sequence (476 letters)
Query ID: | ds2016-58_76 |
Query definition: | No definition line |
Query length: | 489 |
Program: | TBLASTX 2.2.29+ |
Database: | /save/stheil/db/refseq_vir/viral.genomic.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
91.3 | 91.3 | 21% | 5.984e-18 | 39% | NC_030876 |
Alignments
Sophora japonica powdery mildew-associated partitivirus isolate HBJZ1510 putative coat protein gene, complete cds
Range 1: 666 to 959 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
91.3 bits(193) | 0.0 | 38/98(39%) | 0/98(0%) | Plus/Plus |
Query 36 ERRCLRHYENVGPAEAWPIPTPLLSIIQSLGAVQPPSKFYGKIIPSLPSLAGFTAGSSLAGIQNVPSILRVPIVPAMQQFLHNFGDNTADFVDEYLYP 329 ER L+ P E W + +P++ +QSLG+V+P Y I P+ P GFTA S G+ VP I R+P + A Q+F+ NFG +T D ++YP Subject 666 ERTVLQMIIKTYPLEQWTVLSPMIGFLQSLGSVKPTDPMYSWICPAFPPFTGFTALHSYRGMSTVPGIQRMPPILAYQKFIFNFGAHTTQTRDAFVYP 959
Nucleotide Sequence (1389 letters)
Query ID: | ds2016-58_76 |
Query definition: | No definition line |
Query length: | 489 |
Program: | TBLASTX 2.2.29+ |
Database: | /save/stheil/db/refseq_vir/viral.genomic.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
297.1 | 980.2 | 30% | 1.224e-125 | 34% | NC_013014 | |
291.6 | 1146.7 | 35% | 7.127e-144 | 30% | NC_030875 | |
114.2 | 248.5 | 17% | 1.075e-47 | 37% | NC_008191 | |
99.1 | 313.4 | 19% | 3.146e-52 | 37% | NC_020234 | |
99.1 | 315.2 | 15% | 8.71e-53 | 38% | NC_030889 |
Alignments
Sclerotinia sclerotiorum partitivirus S segment 1, complete genome
Range 1: 137 to 880 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
297.1 bits(642) | 0.0 | 127/248(51%) | 0/248(0%) | Plus/Plus |
Query 159 KRFLNAHSRTSQREQRFITRMTKRAIYTHCQPELANQAINGYRRSATDPDSGEKDFLKTDQPYHDVPRDFHYKRALRVVEQLFRPHRRLKPIAFPDLRYFPWTISTAAEAPYTESAYWQEHIRQKAREGEIDTERITFHNLYNEIFHNNRSLIHDIKYGKSNFWTKSGEPIPYEFTYLHSRSHMVKSDKPDKIRAVFGVPKLLLMVENMFIWNLQREYLNRPLGESPLLWGFETIRGGWMKLLSKLNS 902 K+ ++H++ S RE+ + K AI H L NQ + G RRS + +DF + +QP H VPRD HY RALRV E+L +P + L PI+FPDLRY+PWT + +AEAPY ++E +R K R GEI+T TFHNL +EIF +NR LIH IK G S FW K G+P PY T LH+R+H+V + DKIRAVFGVPKLLLM ENMFIW LQ YLN+ + LLWG E ++GGW KL +L + Subject 137 KKIRSSHTKVSPREEATRFSILKHAILKHGSVGLLNQVLLGKRRSDASDERLIQDFHEFEQPVHPVPRDKHYLRALRVTEKLMKPAKTLHPISFPDLRYYPWTKNVSAEAPYNFEKKYEELLRDKQRLGEIETATATFHNLEDEIFEDNRYLIHKIKEGDSQFWDKDGKPRPYYHTTLHARAHVVGHEDADKIRAVFGVPKLLLMAENMFIWPLQAYYLNQDTTKHHLLWGNEIMKGGWKKLWGQLQN 880
Range 2: 1046 to 1297 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
122.5 bits(261) | 0.0 | 52/84(62%) | 0/84(0%) | Plus/Plus |
Query 1074 QQITRLWTWMCHAIKHTPIKAESGNMYQWRFNSIASGFQQTQLLDSFVNVIYLLTCLSAAGINIESDDFQVLVQGDDSVTSFPE 1325 ++I LW WM +KH PI G +YQW N IASGFQQTQLLDSFVN+I LLT LSA GINIE DF + VQGDDS+ S E Subject 1046 RRIENLWIWMTDMVKHYPILQPDGKVYQWTRNGIASGFQQTQLLDSFVNMIMLLTVLSANGINIEHPDFWIKVQGDDSLISIVE 1297
Range 3: 878 to 991 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
72.5 bits(152) | 0.0 | 26/38(68%) | 0/38(0%) | Plus/Plus |
Query 897 NSKFSNFTLSADWSGFDHKALHEVMDDVHDMWKSWFDF 1010 N + S LS DWS FD +ALHEV+DDVH MWKSWFDF Subject 878 NGRISRTILSLDWSEFDKRALHEVIDDVHSMWKSWFDF 991
Range 4: 514 to 771 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
91.3 bits(193) | 0.0 | 48/86(56%) | 0/86(0%) | Minus/Minus |
Query 536 QMNMFSTISSSLGTPKTARILSGLSDLTICERECR*VNS*GIGSPDLVQKFDLPYLISCIKERLL*KISLYRLWNVILSVSISPSR 793 QMNMFS I++S GTPKTARILS S T C CR V *G G P L Q ++ P I I+ RL KIS RLW V ++VSISP R Subject 514 QMNMFSAINNSFGTPKTARILSASSCPTTCALACRVV***GRGFPSLSQNWESPSFIL*IR*RLSSKISSSRLWKVAVAVSISPRR 771
Range 5: 1063 to 1284 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
63.8 bits(133) | 0.0 | 36/74(49%) | 0/74(0%) | Minus/Minus |
Query 1091 VTESSP*TRTWKSSDSMLIPAAERHVSK*ITLTNESSSWVC*KPDAMELKRH*YMLPDSALMGVCLIAWHIQVQ 1312 ++ESSP*T KS SMLIP A+ V I LTNES S VC PDA+ H* P MG CL I +Q Subject 1063 MSESSP*TLIQKSGCSMLIPFADSTVKSIIILTNESRSCVCWNPDAIPFLVH**TFPSGWRMG*CLTMSVIHIQ 1284
Range 6: 877 to 990 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
47.3 bits(97) | 0.0 | 23/38(61%) | 0/38(0%) | Minus/Minus |
Query 896 KSNHDFHMSWTSSITS*RAL*SKPLQSAERVKFENLEF 1009 KSN DFHM WTSSITS RA S QS E + E L F Subject 877 KSNQDFHMEWTSSITSCRARLSNSDQSRESMVLEILPF 990
Range 7: 256 to 444 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
44.1 bits(90) | 0.0 | 31/63(49%) | 0/63(0%) | Minus/Minus |
Query 278 VQGKYLRSGKAIGFKRR*GLNNCSTTRSALL**KSRGTS**G*SVLRKSFSPESGSVADRR*P 466 VQG YLRSGK IG + G + S TRSA * SRGT * G S KS S ++RR P Subject 256 VQG*YLRSGKDIGCRVFAGFISFSVTRSARR*CLSRGTG*TGCSNS*KS*IRRSSEASERRLP 444
Range 8: 817 to 864 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
23.5 bits(45) | 0.0 | 8/16(50%) | 0/16(0%) | Minus/Minus |
Query 839 RSFIHPPRMVSNPQSK 886 +SF PP ++S PQS+ Subject 817 QSFFQPPFIISFPQSR 864
Range 9: 1052 to 1198 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
50.1 bits(103) | 0.0 | 23/49(47%) | 0/49(0%) | Minus/Minus |
Query 1080 NHIDK*IEQLGLLKTGCYGVETPLIHVARFGLDGCVLDSMAHPGPESGD 1226 NHI++*IE+L LL++ C V PLI+++ DG V D + HP PE D Subject 1052 NHINE*IEELRLLESRCNSVSCPLINLSIRLEDGIVFDHVGHPYPEVFD 1198
Range 10: 701 to 877 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
46.4 bits(95) | 0.0 | 23/59(39%) | 0/59(0%) | Minus/Minus |
Query 723 IQLAKKFHPSTSNGFESPE*GRFTKWAVEVFTLEVPDEHVLDH***FRYTEDSTDFVGL 899 ++L+ +F P+ + SPE* F + VE+ L PDEHV H*** +++S++F+G+ Subject 701 LKLSPEFLPAAFHYLVSPE*VMFGRILVEIVGL*WPDEHVFSH***LWNSKNSSNFIGV 877
Range 11: 911 to 991 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
35.0 bits(70) | 0.0 | 12/27(44%) | 0/27(0%) | Minus/Minus |
Query 930 KVKPRFPHVMDVVHNFMKSFVIKATPI 1010 +V+PRFPH +DV+++F+ S I+ P+ Subject 911 EVEPRFPHGVDVIYHFV*SSFIELRPV 991
Range 12: 1050 to 1292 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
44.1 bits(90) | 0.0 | 29/81(36%) | 0/81(0%) | Plus/Plus |
Query 1078 KSPDSGPGCAMLSSTHPSRPNLATCINGVSTP*HPVFNKPNCSIHLSM*FTY*RAFPPPVLTLNPMTSKSSFKVTTPSLVS 1320 +S SG G S+T PS + ING T H N+ + SIH +* +*+ + TLN +T S FK T S S Subject 1050 ESKTSGYG*PTWSNTIPSSNRMERFINGQETELHLDSNRRSSSIHSLI*LCF*QYYQRTESTLNILTFGSKFKAMTHSFQS 1292
Range 13: 627 to 836 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
42.3 bits(86) | 0.0 | 24/70(34%) | 0/70(0%) | Plus/Plus |
Query 649 GPNPENRYPTSLLTCILVHIWLNPTSPTKSVLSSVYLNYY*WSRTCSSGTSSVNTSTAHLVNRPYSGDSK 858 G ENR T H+ + +P K L + +YY*W +TCSSG ST N YSG+++ Subject 627 GIKTENRALTITPPYTQEHML*DTKTPIKFELFLEFQSYY*WLKTCSSGHYKPTISTRIRPNITYSGETR 836
Sophora japonica powdery mildew-associated partitivirus isolate HBJZ1510 putative dependent RNA polymerase gene, complete cds
Range 1: 144 to 782 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
291.6 bits(630) | 0.0 | 121/213(57%) | 0/213(0%) | Plus/Plus |
Query 189 SQREQRFITRMTKRAIYTHCQPELANQAINGYRRSATDPDSGEKDFLKTDQPYHDVPRDFHYKRALRVVEQLFRPHRRLKPIAFPDLRYFPWTISTAAEAPYTESAYWQEHIRQKAREGEIDTERITFHNLYNEIFHNNRSLIHDIKYGKSNFWTKSGEPIPYEFTYLHSRSHMVKSDKPDKIRAVFGVPKLLLMVENMFIWNLQREYLNRPL 827 S R R + KRAIY C LA Q I G++RS D E DFL++D PY D+ RDFHY RALRV E+LFRP R L PIAFPDLR++PW++S +AEAP++ IR + +GE R+TFHNLYNEIF NR+LIH IK G +FW K G P PY + LH+R H+VKS +PDK+RAVFGVPKLLLM ENMFIW+LQ+EYLN+ + Subject 144 SLRINRIRQGIIKRAIYKICPINLARQVIFGFKRSEGSDDVAETDFLRSDVPYFDMKRDFHYLRALRVCERLFRPSRTLHPIAFPDLRFYPWSLSVSAEAPFSVEKKRSTLIRSRQSDGEDLDGRLTFHNLYNEIFELNRNLIHQIKEGDKSFWNKDGTPRPYWYNTLHTRPHLVKSSEPDKLRAVFGVPKLLLMAENMFIWSLQKEYLNQKI 782
Range 2: 1017 to 1298 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
158.2 bits(339) | 0.0 | 59/94(63%) | 0/94(0%) | Plus/Plus |
Query 1050 YSDTKSREQQITRLWTWMCHAIKHTPIKAESGNMYQWRFNSIASGFQQTQLLDSFVNVIYLLTCLSAAGINIESDDFQVLVQGDDSVTSFPEMV 1331 Y +K+ Q+I RLW WMC+ K+TPIK +SG +YQW++N IASG+QQTQL+ SFVN IY+LTCLS GINIESD+FQ+ VQGDDS+T F E++ Subject 1017 YPKSKTNPQKIERLWNWMCYCSKYTPIKGQSGQLYQWQYNGIASGYQQTQLIGSFVNSIYMLTCLSDLGINIESDNFQLFVQGDDSLTEFSEII 1298
Range 3: 783 to 968 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
103.2 bits(219) | 0.0 | 35/62(56%) | 0/62(0%) | Plus/Plus |
Query 831 ESPLLWGFETIRGGWMKLLSKLNSKFSNFTLSADWSGFDHKALHEVMDDVHDMWKSWFDFDQ 1016 +SP+LWGFET +GGW+K+ +++ SK + LSADWSGFD AL E +DD+H MW++WFDF + Subject 783 QSPMLWGFETFKGGWLKIWNRMYSKKCSTFLSADWSGFDRFALFECVDDIHRMWRNWFDFSK 968
Range 4: 494 to 769 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
77.6 bits(163) | 0.0 | 48/92(52%) | 0/92(0%) | Minus/Minus |
Query 539 RYSRWRFQMNMFSTISSSLGTPKTARILSGLSDLTICERECR*VNS*GIGSPDLVQKFDLPYLISCIKERLL*KISLYRLWNVILSVSISPS 814 +YS + QMN+FS ISSS GTP TA LSG DLT CR + *G G P L QK P LI I+ R KISL RL NV L SPS Subject 494 KYSFCKLQMNIFSAISSSFGTPNTALSLSGSLDLTR*GLVCRVLYQ*GRGVPSLFQKDLSPSLIW*IRFRFNSKISL*RL*NVSLPSKSSPS 769
Range 5: 1046 to 1294 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
73.5 bits(154) | 0.0 | 42/83(51%) | 0/83(0%) | Minus/Minus |
Query 1079 ISGKLVTESSP*TRTWKSSDSMLIPAAERHVSK*ITLTNESSSWVC*KPDAMELKRH*YMLPDSALMGVCLIAWHIQVQSRVI 1327 IS V SSP*T++ K SDS+LIP +++HV+ *I LTN+ S VC* P+A+ L H* PD L+GV HIQ Q R I Subject 1046 ISENSVKLSSP*TKS*KLSDSILIPRSDKHVNI*IELTNDPMS*VC**PEAIPLYCH**SWPD*PLIGVYFEQ*HIQFQRRSI 1294
Range 6: 785 to 967 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
47.8 bits(98) | 0.0 | 27/61(44%) | 0/61(0%) | Minus/Minus |
Query 833 WSKSNHDFHMSWTSSITS*RAL*SKPLQSAERVKFENLEFNLLRSFIHPPRMVSNPQSKGD 1015 + KSN H+ SS S RA S P QSA++ E+ L + F HPP VS PQS GD Subject 785 FEKSNQFLHIL*ISSTHSKRANRSNPDQSADKKVEHFFEYILFQIFNHPPLNVSKPQSIGD 967
Range 7: 173 to 418 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
43.7 bits(89) | 0.0 | 38/82(46%) | 0/82(0%) | Minus/Minus |
Query 218 QGKYLRSGKAIGFKRR*GLNNCSTTRSALL**KSRGTS**G*SVLRKSFSPESGSVADRR*PLIA*LASSG*Q*V*IARLVI 463 QG RSG AIG G + S TR A **KS S *G S +KS S S +DR P I LA Q +*IARL+I Subject 173 QG*NRRSGNAIGCNVLEGRKSRSQTRRARK**KSLFISK*GTSDRKKSVSATSSLPSDRLKPKITCLARLIGQIL*IARLII 418
Range 8: 573 to 773 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.0 bits(105) | 0.0 | 28/67(42%) | 0/67(0%) | Minus/Minus |
Query 618 VEVFTLEVPDEHVLDH***FRYTEDSTDFVGLVGFNHM*TRMQVSKLVGYRFSGFGPEIRFTILDIV 818 ++VF L PDEH+ H***FR T+ S+ F+G FN M RM VG + F P+ T ++V Subject 573 IQVFLL*APDEHIFGH***FRDTKHSSKFIGFT*FNKMRPRM*SVVPVGSWSTIFIPKRFITFFNLV 773
Range 9: 1029 to 1196 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.9 bits(83) | 0.0 | 21/56(38%) | 0/56(0%) | Minus/Minus |
Query 1062 VNHIDK*IEQLGLLKTGCYGVETPLIHVARFGLDGCVLDSMAHPGPESGDLLFAGF 1229 +N ++K* +L LL T + PLI +AR D VL ++ HP P++ +LL F Subject 1029 IN*VNK*SNELSLLITRSDTIVLPLIELARLTFDRSVL*AVTHPVPKTFNLLRVSF 1196
Range 10: 291 to 446 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
35.9 bits(72) | 0.0 | 18/52(35%) | 0/52(0%) | Minus/Minus |
Query 336 GSFCCGADGPGKVSQVGKSDRLQTAVRSEQLFNYAECSLVMKVARDVMIRLI 491 G FC P S+VGK +R+Q + +++ F +E S +MK++ + IR I Subject 291 GCFC*N*KRPRVKSEVGKCNRMQCS*GTKESFTNSESS*IMKISFHIEIRNI 446
Range 11: 882 to 962 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
23.5 bits(45) | 0.0 | 8/27(30%) | 0/27(0%) | Minus/Minus |
Query 930 KVKPRFPHVMDVVHNFMKSFVIKATPI 1010 K+KP PH ++++ +S I++ P+ Subject 882 KIKPISPHSVNIIDALEESKSIESGPV 962
Range 12: 628 to 768 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
38.6 bits(78) | 0.0 | 20/47(43%) | 0/47(0%) | Plus/Plus |
Query 673 PTSLLTCILVHIWLNPTSPTKSVLSSVYLNYY*WSRTCSSGTSSVNT 813 PT I I LN +P L V NYY*W + CSSG NT Subject 628 PTGTTLYIRGLILLNQVNPINLELCLVSRNYY*WPKICSSGAYRRNT 768
Range 13: 1055 to 1207 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
38.6 bits(78) | 0.0 | 18/51(35%) | 0/51(0%) | Plus/Plus |
Query 1088 TLDLDVPCYQAHTHQGRIWQHVSMAFQLHSIRFSTNPTARFICQCDLLTDV 1240 +L+LDV + H+ Q IW +S+A Q + STN T IC +L ++ Subject 1055 SLELDVLLLKVHSDQRSIWPTLSVAIQWYRFWLSTNSTHWIIC*LNLYVNM 1207
Range 14: 81 to 185 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
26.3 bits(51) | 0.0 | 12/35(34%) | 0/35(0%) | Plus/Plus |
Query 114 TNLIRLGRAPMNRRTKRFLNAHSRTSQREQRFITR 218 TNL+RLG+ P +++ L+ R ++ Q I R Subject 81 TNLLRLGKIPRSKKHNDPLSRSLRINRIRQGIIKR 185
Range 15: 1060 to 1263 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
35.9 bits(72) | 0.0 | 26/68(38%) | 0/68(0%) | Plus/Plus |
Query 1093 GPGCAMLSSTHPSRPNLATCINGVSTP*HPVFNKPNCSIHLSM*FTY*RAFPPPVLTLNPMTSKSSFK 1296 G GC ST S+ NLA I+G + V NK N HL F * + L LN T S FK Subject 1060 GTGCVTAQSTLRSKVNLANSISGNTMVSLLVINKLNSLDHLLTQFIC*HVYLILGLILNLTTFNSLFK 1263
Raphanus sativus cryptic virus 1 dsRNA 1, complete sequence
Range 1: 230 to 586 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
114.2 bits(243) | 0.0 | 44/119(37%) | 0/119(0%) | Plus/Plus |
Query 273 INGYRRSATDPDSGEKDFLKTDQPYHDVPRDFHYKRALRVVEQLFRPHRRLKPIAFPDLRYFPWTISTAAEAPYTESAYWQEHIRQKAREGEIDTERITFHNLYNEIFHNNRSLIHDIK 629 +NGY RS D D+ E+ F++ D D+ +D +Y +A V + FRP + P+ F D+R++PW IST+AE P+T ++ ++ + G +D R++FHN YN+IF R H++K Subject 230 LNGYYRSHADEDTAEQFFMRYDVEPFDIIKDNYYSQAFDTVTEWFRPSAPIHPVHFTDVRWYPWKISTSAERPFTHDPLLKKKVQLSKQLGLLDNARMSFHNCYNDIFTYCRHYTHEVK 586
Range 2: 584 to 742 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
56.5 bits(117) | 0.0 | 23/53(43%) | 0/53(0%) | Plus/Plus |
Query 654 KSGEPIPYEFTYLHSRSHMVKSDKPDKIRAVFGVPKLLLMVENMFIWNLQREY 812 K P+ LH + +V+S +P KIR VFGVPK L+ E MF W L +Y Subject 584 KDARPVTLHHIDLHVKPALVRSGEPPKIRTVFGVPKSLIFAEAMFFWPLFSDY 742
Rosellinia necatrix partitivirus 2 RdRp gene for RNA-dependent RNA polymerase, complete cds
Range 1: 201 to 518 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
99.1 bits(210) | 0.0 | 39/106(37%) | 0/106(0%) | Plus/Plus |
Query 216 RMTKRAIYTHCQPELANQAINGYRRSATDPDSGEKDFLKTDQPYHDVPRDFHYKRALRVVEQLFRPHRRLKPIAFPDLRYFPWTISTAAEAPYTESAYWQEHIRQK 533 R+ A+ H + +Q +NGYRRS + D+ KD K D H V +D HY+ A++ V++L P + L+P+ F DLR + W +ST AP+ S +WQ++++ K Subject 201 RIIDFALRKHLTSDEFDQVVNGYRRSPWNEDALNKDIEKLDSDEHTVIKDQHYENAIQHVQKLLTPEKPLQPVHFADLRRYKWRLSTNIGAPFASSKHWQDYVKAK 518
Range 2: 1104 to 1334 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
71.6 bits(150) | 0.0 | 29/77(38%) | 0/77(0%) | Plus/Plus |
Query 1038 NTHDYSDTKSREQQITRLWTWMCHAIKHTPIKAESGNMYQWRFNSIASGFQQTQLLDSFVNVIYLLTCLSAAGINIE 1268 +T D +S E +IT LW WM AI TP+ +G ++ + I SG+ QTQ+LDS N++ + T LS G +++ Subject 1104 DTSKTKDGQSNEWRITNLWNWMTDAILSTPLLLPNGRFIRFNHSGIYSGYFQTQILDSIYNLVMIFTILSRMGFDLD 1334
Range 3: 747 to 851 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.0 bits(105) | 0.0 | 20/35(57%) | 0/35(0%) | Plus/Plus |
Query 696 SRSHMVKSDKPDKIRAVFGVPKLLLMVENMFIWNL 800 +R H+VK+D+ DK+R VFG P LL E MFIW L Subject 747 ARQHLVKADEDDKVRLVFGAPFSLLCAELMFIWPL 851
Range 4: 978 to 1040 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
34.5 bits(69) | 0.0 | 11/21(52%) | 0/21(0%) | Plus/Plus |
Query 921 LSADWSGFDHKALHEVMDDVH 983 ++ DWSGFD A H V+ D+H Subject 978 VTVDWSGFDRYARHTVIKDIH 1040
Arabidopsis halleri partitivirus 1 genomic RNA, segment 1, complete sequence
Range 1: 243 to 512 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
99.1 bits(210) | 0.0 | 37/90(41%) | 0/90(0%) | Plus/Plus |
Query 264 NQAINGYRRSATDPDSGEKDFLKTDQPYHDVPRDFHYKRALRVVEQLFRPHRRLKPIAFPDLRYFPWTISTAAEAPYTESAYWQEHIRQK 533 N +NGYRRS + D+ D K + YH V +D HY +A+ ++LF P +L+P+ F DLR++PW +ST+ AP+ S W+++I QK Subject 243 NIVVNGYRRSPWNEDALTADIEKLNSDYHHVNKDEHYYKAIEHTKKLFTPKEKLRPVHFNDLRHYPWQLSTSIGAPFATSEKWKDYINQK 512
Range 2: 1098 to 1295 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
64.8 bits(135) | 0.0 | 26/66(39%) | 0/66(0%) | Plus/Plus |
Query 1074 QQITRLWTWMCHAIKHTPIKAESGNMYQWRFNSIASGFQQTQLLDSFVNVIYLLTCLSAAGINIES 1271 Q++ LW WM +AI TP+ G Q++ + I SG+ QTQ+LDS N + + T LS G ++ S Subject 1098 QRLENLWNWMKNAILTTPLLLPDGTRLQFQHSGIYSGYFQTQILDSMYNCVMIFTVLSRMGFDLNS 1295
Range 3: 723 to 851 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
57.0 bits(118) | 0.0 | 22/43(51%) | 0/43(0%) | Plus/Plus |
Query 693 HSRSHMVKSDKPDKIRAVFGVPKLLLMVENMFIWNLQREYLNR 821 H+R H+V++ DK+R VFG P LLM E MFIW +Q L R Subject 723 HARQHLVEAGDEDKVRLVFGAPSTLLMAELMFIWPIQTSLLAR 851
Range 4: 861 to 944 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
37.3 bits(75) | 0.0 | 13/28(46%) | 0/28(0%) | Plus/Plus |
Query 834 SPLLWGFETIRGGWMKLLSKLNSKFSNF 917 SP+LWG+ET GGW +L + S F Subject 861 SPMLWGYETTTGGWSRLYNWAYSALPRF 944