Queries
Nucleotide Sequence (328 letters)
Query ID: | ds2016-57_54 |
Query definition: | No definition line |
Query length: | 328 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
128.6 | 128.6 | 24% | 2.298e-32 | 89% | APT70074 |
Alignments
capsid protein [Alternaria alternata partitivirus 1]
Sequence ID: gb|APT70074.1| Length: 501 Number of Matches: 1
Range 1: 66 to 145 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.6 bits(322) | 0.0 | 71/80(89%) | 0/80(0%) | Plus/Plus |
Query 87 YAEGNAAXXXXXXXXXXXRERILSPFKTDKYFHMVSSSYQRLISVKPSIPARFSYEEFLHCSALQLYQRMENVKFDALGI 326 +AEGNAALLSYGLSLSGYRERILSPFKTDK+FH+VS+SYQRLI+VKPSIP+RF+YEEFLHCSALQLYQR+ENVKFDALG+ Subject 66 FAEGNAALLSYGLSLSGYRERILSPFKTDKFFHIVSASYQRLINVKPSIPSRFTYEEFLHCSALQLYQRIENVKFDALGV 145
Nucleotide Sequence (815 letters)
Query ID: | ds2016-57_54 |
Query definition: | No definition line |
Query length: | 328 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
479.6 | 479.6 | 33% | 1.317e-163 | 91% | APT70073 |
Alignments
RNA-dependent RNA polymerase [Alternaria alternata partitivirus 1]
Sequence ID: gb|APT70073.1| Length: 571 Number of Matches: 1
Range 1: 262 to 532 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
479.6 bits(1233) | 0.0 | 247/271(91%) | 0/271(0%) | Minus/Plus |
Query 1 FGVEVKVMEMRYCIPLVKRFSDMFGKTPYPVGRNMTKALPFIIDNLLDDKKFGLVTDISKLDTSVGPDWIDWAFSQLKSFFDMGMTASSETRNSHVFDFLHYYFKRTPILLPSGQLIKKAGGVPSGSGFXXXXXXXXXXXXXVYSRLRMGHKKPDIIKMFVVGDDMATSVDHDFSIEEFSHYMSQLGFEINPSKVMFSDKGIELKFLGYSKRGGGLYRPIEELLQTAFFPEKYVGNPNRSRQRNLGQSIAAGLSNSFFDKCNYWMEELVTL 813 + EVKV+EMRYCIPL+KRFS+MFGKTPYPVGRNMTKALPFIID+LL DKKFGLVTDISKLDTSVGPDWIDWAFSQLKSFFD G T SSE R+S+VFDFLH+YFKRTPILLPSGQL+KKAGGVPSGSGFTQLVDTLVTTLATVYSRLRMGH K I KMFVVGDDMATSVDHDFSIEEFSH M QLGFEINPSKVMFS+KGIELKFLGYSKRGGGLYRPIEELLQTAFFPEKYVGNPNRSRQR LGQSIAAGLSNSFFDKCNYWMEELVTL Subject 262 YPAEVKVIEMRYCIPLMKRFSEMFGKTPYPVGRNMTKALPFIIDHLLQDKKFGLVTDISKLDTSVGPDWIDWAFSQLKSFFDFGFTLSSERRDSNVFDFLHFYFKRTPILLPSGQLVKKAGGVPSGSGFTQLVDTLVTTLATVYSRLRMGHTKDQIFKMFVVGDDMATSVDHDFSIEEFSHIMGQLGFEINPSKVMFSNKGIELKFLGYSKRGGGLYRPIEELLQTAFFPEKYVGNPNRSRQRILGQSIAAGLSNSFFDKCNYWMEELVTL 532
Nucleotide Sequence (365 letters)
Query ID: | ds2016-57_54 |
Query definition: | No definition line |
Query length: | 328 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
124.0 | 124.0 | 33% | 1.775e-30 | 53% | APT70074 |
Alignments
capsid protein [Alternaria alternata partitivirus 1]
Sequence ID: gb|APT70074.1| Length: 501 Number of Matches: 1
Range 1: 248 to 368 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
124.0 bits(310) | 0.0 | 64/121(53%) | 1/121(1%) | Plus/Plus |
Query 4 LKKEELIRRISQAKRNASFVR*AVDDGRAEVVNDRVYLYPEVSVDVVNKA-TSKSDYLEINGKWYNVGLPNSELKKLPGYKLEGDYLTEVEQLMDQARSAKRERITPRFDPAYEPTSYKIS 363 +KK++LIRRI+ AKRNA+ V A+DDGRA ++++RVY YP V V V+ A +++DY +I+ KWY+ GL + ++K YK E YL EV +LM QA++AKRERITP D AY+P SY IS Subject 248 VKKQDLIRRIATAKRNANSVSSAIDDGRAVLLDNRVYFYPVVDVKEVDAADKNRADYEQIDDKWYHTGLDPTAVRKTTSYKTETGYLEEVNELMKQAKAAKRERITPILDSAYKPESYTIS 368