Queries
Nucleotide Sequence (593 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
445.1 | 2398.2 | 39% | 3.781e-123 | 93% | AF057136.1 | |
445.1 | 2398.2 | 39% | 3.781e-123 | 93% | NC_001948.1 | |
438.2 | 2395.0 | 39% | 4.432e-121 | 93% | JX513892.1 | |
437.3 | 2396.4 | 39% | 8.366e-121 | 92% | KX925555.1 | |
434.1 | 2387.2 | 39% | 7.728e-120 | 93% | AF026278.1 |
Alignments
Rupestris stem pitting associated virus 1, complete genome
Sequence ID: AF057136.1 Length: 8744 Number of Matches: 9
Range 1: 5165 to 5749 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
445.1 bits(965) | 0.0 | 188/195(96%) | 0/195(0%) | Plus/Minus |
Query 2 LEASKGLPSFSYSKPVVKFSTVL*LHKNQSNI**PIPA*PTCMILYSCCTLTSLLRFKLPHRFIKHDGIMTGFQWDFG*ERI**EFPIWFGPPQFGSLNLGLRKFETLSDSHKEGY*IISFMPWVNAFKPLTCIAQLLTSSTSMLIKELLSHFITTTHLPILFQGHFTHPPGPG*LQITQGDVGFKPFFI*AF*L 586 LEASKGLPSFSYSKPVVKFSTVL*LHKNQSNI**PIPA*PTCMILYSCCTLTSLLR KL +RF+KHDGIMTGFQWDFG*ERI**EFPIWFGPPQFGS NLGLRKFETLSDSH+EGY*IISFMPWVNAFKPLTCIAQLLTSST MLIKELLSHFITTTHLPILFQGHFTHPPGPG*LQITQGDVGFKPFFI*AF*L Subject 5165 LEASKGLPSFSYSKPVVKFSTVL*LHKNQSNI**PIPA*PTCMILYSCCTLTSLLRLKLLYRFMKHDGIMTGFQWDFG*ERI**EFPIWFGPPQFGSFNLGLRKFETLSDSHEEGY*IISFMPWVNAFKPLTCIAQLLTSSTPMLIKELLSHFITTTHLPILFQGHFTHPPGPG*LQITQGDVGFKPFFI*AF*L 5749
Range 2: 5165 to 5749 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
432.2 bits(937) | 0.0 | 189/195(97%) | 0/195(0%) | Minus/Plus |
Query 2 ESECSNEEWFKTHIPLSNLESTRARRVGKMALKEYREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKIPLKASHNPIMFDEAVREFXXXXXXXXXATIENHAGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQ 586 ESECSNEEWFKTHIPLSNLESTRAR VGKMALKEYREVRCGYE+TQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKIPLKASHN IMF EAV+EFEAK+ASKSAATIENHAGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQ Subject 5165 ESECSNEEWFKTHIPLSNLESTRARWVGKMALKEYREVRCGYEMTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKIPLKASHNSIMFHEAVQEFEAKKASKSAATIENHAGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQ 5749
Range 3: 5163 to 5579 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
337.9 bits(731) | 0.0 | 129/139(93%) | 0/139(0%) | Plus/Minus |
Query 172 QTPAPLHQT*WDYDWLSMGFWIGKNLIRISHMVWPASVWQPQPGASKI*DAFGQP*GRLLNHFLYALGKCFQTSHMHCSVAHQFHLYAHQRTVESLHNHNAPPDTLSRPFYPPSWPWLTPNYSGGCGF*TILHLSILTP 588 QTP PLH+T*W+YDWLSMGFWIGKNLIRISHMVWPASVWQ QPGASKI*DAFGQP*GRLLNHFLYALGKCFQTSHMHCSVAHQFH YAHQR VES HNHNAPPDTLSRPFYPP+WPWLTP+YS GCGF*TILHLSILTP Subject 5163 QTPVPLHET*WNYDWLSMGFWIGKNLIRISHMVWPASVWQLQPGASKI*DAFGQP*GRLLNHFLYALGKCFQTSHMHCSVAHQFHPYAHQRIVESFHNHNAPPDTLSRPFYPPTWPWLTPDYSRGCGF*TILHLSILTP 5579
Range 4: 5626 to 5748 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
100.0 bits(212) | 0.0 | 40/41(98%) | 0/41(0%) | Plus/Minus |
Query 3 WKQARVCPALATLSLLSNLVQCCDFIKIRATSNSQSLHDLP 125 WKQARVCPALATLSLLSNLVQCCDFIKIRATSN+QSLHDLP Subject 5626 WKQARVCPALATLSLLSNLVQCCDFIKIRATSNNQSLHDLP 5748
Range 5: 5257 to 5748 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
346.6 bits(750) | 0.0 | 153/164(93%) | 0/164(0%) | Minus/Plus |
Query 3 LERVSGGALWL*SDSTVL**A*RWNW*ATEQCM*EV*KHLPKA*RK*FNNLPYGCPKASQIFEAPG*GCQTEAGQTIWEILIRFFPIQNPIESQS*SHHV**SGAGV*SEGG**ECSNYRESCR*VMQGLAIRCCSDFYEVTTLY*I*QQA*SS*SWANPCLLP 494 LERVSGGALWL*+DST+L**A* WNW*ATEQCM*EV*KHLPKA*RK*FNNLP+GCPKASQIFEAPG* CQTEAGQTIWEILIRFFPIQNPIESQS* HHV *SG GV* E G**ECSNYRESCR*VMQGL IRCCSDFYEVTTLY*I*QQA*SS*SWANPCLLP Subject 5257 LERVSGGALWL*NDSTIL**A*GWNW*ATEQCM*EV*KHLPKA*RK*FNNLPHGCPKASQIFEAPG*SCQTEAGQTIWEILIRFFPIQNPIESQS*FHHVS*SGTGV*GEEG**ECSNYRESCR*VMQGLVIRCCSDFYEVTTLY*I*QQA*SS*SWANPCLLP 5748
Range 6: 5164 to 5208 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
36.3 bits(73) | 0.0 | 15/15(100%) | 0/15(0%) | Minus/Plus |
Query 543 GVRMLK*RMV*NPHP 587 GVRMLK*RMV*NPHP Subject 5164 GVRMLK*RMV*NPHP 5208
Range 7: 5166 to 5690 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
350.2 bits(758) | 0.0 | 167/175(95%) | 0/175(0%) | Minus/Plus |
Query 61 SQNAQMKNGLKPTSP*VIWSQPGPGGWVKWP*KSIGRCVVVMK*LNSSLMSIEVELVSN*AMHVRGLKAFTQGIKEMIQ*PSLWLSESVSNFRSPRLRLPN*GGPNHMGNSY*ILSYPKSH*KPVIIPSCLMKRCGSLKXXXXXXXXXXXRIMQVGHAGIGY*MLL*FL*SHNTV 585 SQNAQMKNGLKPTSP*VIWSQPGPGGWVKWP*KSIGRCVVVMK*LN+SLMSI VELVSN*AMHVRGLKAFTQGIKEMIQ*PS WLSESVSNFRSPRL+LPN*GGPNHMGNSY*ILSYPKSH*KPVIIPSC MKR SL+RRRLVRVQQL*RIMQVGHAGIGY*MLL*FL*SHNTV Subject 5166 SQNAQMKNGLKPTSP*VIWSQPGPGGWVKWP*KSIGRCVVVMK*LNNSLMSIGVELVSN*AMHVRGLKAFTQGIKEMIQ*PSSWLSESVSNFRSPRLKLPN*GGPNHMGNSY*ILSYPKSH*KPVIIPSCFMKRYRSLRRRRLVRVQQL*RIMQVGHAGIGY*MLL*FL*SHNTV 5690
Range 8: 5164 to 5577 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
261.3 bits(564) | 0.0 | 130/138(94%) | 0/138(0%) | Plus/Minus |
Query 174 NSRTASSNMMGL*LAFNGILDRKESNKNFPYGLARLSLAASTWGFENLRRFRTAIRKVIESFPLCLG*MLSNLSHAXXXXXXXXXXXXXKNC*VTS*PQRTSRYSFKAILPTLLALVDSKLLRGMWVLNHSSFEHSDS 587 NS TAS NMM L*LAFNGILDRKESNKNFPYGLARLSLAASTWGFENLRRFRTA+RKVIESFPLCLG*MLSNLSHALLSCSPVPPLCSSKNC*V S*PQRTSRYSFKAILPT LALVDS+LL+GMWVLNHSSFEHSDS Subject 5164 NSCTAS*NMMEL*LAFNGILDRKESNKNFPYGLARLSLAASTWGFENLRRFRTAMRKVIESFPLCLG*MLSNLSHALLSCSPVPPLCSSKNC*VIS*PQRTSRYSFKAILPTHLALVDSRLLKGMWVLNHSSFEHSDS 5577
Rupestris stem pitting associated virus 1, complete genome
Sequence ID: NC_001948.1 Length: 8744 Number of Matches: 9
Range 1: 5165 to 5749 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
445.1 bits(965) | 0.0 | 188/195(96%) | 0/195(0%) | Plus/Minus |
Query 2 LEASKGLPSFSYSKPVVKFSTVL*LHKNQSNI**PIPA*PTCMILYSCCTLTSLLRFKLPHRFIKHDGIMTGFQWDFG*ERI**EFPIWFGPPQFGSLNLGLRKFETLSDSHKEGY*IISFMPWVNAFKPLTCIAQLLTSSTSMLIKELLSHFITTTHLPILFQGHFTHPPGPG*LQITQGDVGFKPFFI*AF*L 586 LEASKGLPSFSYSKPVVKFSTVL*LHKNQSNI**PIPA*PTCMILYSCCTLTSLLR KL +RF+KHDGIMTGFQWDFG*ERI**EFPIWFGPPQFGS NLGLRKFETLSDSH+EGY*IISFMPWVNAFKPLTCIAQLLTSST MLIKELLSHFITTTHLPILFQGHFTHPPGPG*LQITQGDVGFKPFFI*AF*L Subject 5165 LEASKGLPSFSYSKPVVKFSTVL*LHKNQSNI**PIPA*PTCMILYSCCTLTSLLRLKLLYRFMKHDGIMTGFQWDFG*ERI**EFPIWFGPPQFGSFNLGLRKFETLSDSHEEGY*IISFMPWVNAFKPLTCIAQLLTSSTPMLIKELLSHFITTTHLPILFQGHFTHPPGPG*LQITQGDVGFKPFFI*AF*L 5749
Range 2: 5165 to 5749 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
432.2 bits(937) | 0.0 | 189/195(97%) | 0/195(0%) | Minus/Plus |
Query 2 ESECSNEEWFKTHIPLSNLESTRARRVGKMALKEYREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKIPLKASHNPIMFDEAVREFXXXXXXXXXATIENHAGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQ 586 ESECSNEEWFKTHIPLSNLESTRAR VGKMALKEYREVRCGYE+TQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKIPLKASHN IMF EAV+EFEAK+ASKSAATIENHAGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQ Subject 5165 ESECSNEEWFKTHIPLSNLESTRARWVGKMALKEYREVRCGYEMTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKIPLKASHNSIMFHEAVQEFEAKKASKSAATIENHAGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQ 5749
Range 3: 5163 to 5579 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
337.9 bits(731) | 0.0 | 129/139(93%) | 0/139(0%) | Plus/Minus |
Query 172 QTPAPLHQT*WDYDWLSMGFWIGKNLIRISHMVWPASVWQPQPGASKI*DAFGQP*GRLLNHFLYALGKCFQTSHMHCSVAHQFHLYAHQRTVESLHNHNAPPDTLSRPFYPPSWPWLTPNYSGGCGF*TILHLSILTP 588 QTP PLH+T*W+YDWLSMGFWIGKNLIRISHMVWPASVWQ QPGASKI*DAFGQP*GRLLNHFLYALGKCFQTSHMHCSVAHQFH YAHQR VES HNHNAPPDTLSRPFYPP+WPWLTP+YS GCGF*TILHLSILTP Subject 5163 QTPVPLHET*WNYDWLSMGFWIGKNLIRISHMVWPASVWQLQPGASKI*DAFGQP*GRLLNHFLYALGKCFQTSHMHCSVAHQFHPYAHQRIVESFHNHNAPPDTLSRPFYPPTWPWLTPDYSRGCGF*TILHLSILTP 5579
Range 4: 5626 to 5748 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
100.0 bits(212) | 0.0 | 40/41(98%) | 0/41(0%) | Plus/Minus |
Query 3 WKQARVCPALATLSLLSNLVQCCDFIKIRATSNSQSLHDLP 125 WKQARVCPALATLSLLSNLVQCCDFIKIRATSN+QSLHDLP Subject 5626 WKQARVCPALATLSLLSNLVQCCDFIKIRATSNNQSLHDLP 5748
Range 5: 5257 to 5748 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
346.6 bits(750) | 0.0 | 153/164(93%) | 0/164(0%) | Minus/Plus |
Query 3 LERVSGGALWL*SDSTVL**A*RWNW*ATEQCM*EV*KHLPKA*RK*FNNLPYGCPKASQIFEAPG*GCQTEAGQTIWEILIRFFPIQNPIESQS*SHHV**SGAGV*SEGG**ECSNYRESCR*VMQGLAIRCCSDFYEVTTLY*I*QQA*SS*SWANPCLLP 494 LERVSGGALWL*+DST+L**A* WNW*ATEQCM*EV*KHLPKA*RK*FNNLP+GCPKASQIFEAPG* CQTEAGQTIWEILIRFFPIQNPIESQS* HHV *SG GV* E G**ECSNYRESCR*VMQGL IRCCSDFYEVTTLY*I*QQA*SS*SWANPCLLP Subject 5257 LERVSGGALWL*NDSTIL**A*GWNW*ATEQCM*EV*KHLPKA*RK*FNNLPHGCPKASQIFEAPG*SCQTEAGQTIWEILIRFFPIQNPIESQS*FHHVS*SGTGV*GEEG**ECSNYRESCR*VMQGLVIRCCSDFYEVTTLY*I*QQA*SS*SWANPCLLP 5748
Range 6: 5164 to 5208 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
36.3 bits(73) | 0.0 | 15/15(100%) | 0/15(0%) | Minus/Plus |
Query 543 GVRMLK*RMV*NPHP 587 GVRMLK*RMV*NPHP Subject 5164 GVRMLK*RMV*NPHP 5208
Range 7: 5166 to 5690 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
350.2 bits(758) | 0.0 | 167/175(95%) | 0/175(0%) | Minus/Plus |
Query 61 SQNAQMKNGLKPTSP*VIWSQPGPGGWVKWP*KSIGRCVVVMK*LNSSLMSIEVELVSN*AMHVRGLKAFTQGIKEMIQ*PSLWLSESVSNFRSPRLRLPN*GGPNHMGNSY*ILSYPKSH*KPVIIPSCLMKRCGSLKXXXXXXXXXXXRIMQVGHAGIGY*MLL*FL*SHNTV 585 SQNAQMKNGLKPTSP*VIWSQPGPGGWVKWP*KSIGRCVVVMK*LN+SLMSI VELVSN*AMHVRGLKAFTQGIKEMIQ*PS WLSESVSNFRSPRL+LPN*GGPNHMGNSY*ILSYPKSH*KPVIIPSC MKR SL+RRRLVRVQQL*RIMQVGHAGIGY*MLL*FL*SHNTV Subject 5166 SQNAQMKNGLKPTSP*VIWSQPGPGGWVKWP*KSIGRCVVVMK*LNNSLMSIGVELVSN*AMHVRGLKAFTQGIKEMIQ*PSSWLSESVSNFRSPRLKLPN*GGPNHMGNSY*ILSYPKSH*KPVIIPSCFMKRYRSLRRRRLVRVQQL*RIMQVGHAGIGY*MLL*FL*SHNTV 5690
Range 8: 5164 to 5577 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
261.3 bits(564) | 0.0 | 130/138(94%) | 0/138(0%) | Plus/Minus |
Query 174 NSRTASSNMMGL*LAFNGILDRKESNKNFPYGLARLSLAASTWGFENLRRFRTAIRKVIESFPLCLG*MLSNLSHAXXXXXXXXXXXXXKNC*VTS*PQRTSRYSFKAILPTLLALVDSKLLRGMWVLNHSSFEHSDS 587 NS TAS NMM L*LAFNGILDRKESNKNFPYGLARLSLAASTWGFENLRRFRTA+RKVIESFPLCLG*MLSNLSHALLSCSPVPPLCSSKNC*V S*PQRTSRYSFKAILPT LALVDS+LL+GMWVLNHSSFEHSDS Subject 5164 NSCTAS*NMMEL*LAFNGILDRKESNKNFPYGLARLSLAASTWGFENLRRFRTAMRKVIESFPLCLG*MLSNLSHALLSCSPVPPLCSSKNC*VIS*PQRTSRYSFKAILPTHLALVDSRLLKGMWVLNHSSFEHSDS 5577
Grapevine rupestris stem pitting associated virus isolate GRSPAV 1050 02 RNA dependent RNA polymerase (RdRp) gene, partial cds; and triple gene block 1 (TGB1), triple gene block 2 (TGB2), triple gene block 3 (TGB3), coat protein (CP), and 14 kDa protein (14K) genes, complete cds
Sequence ID: JX513892.1 Length: 8716 Number of Matches: 9
Range 1: 5156 to 5740 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
438.2 bits(950) | 0.0 | 185/195(95%) | 0/195(0%) | Plus/Minus |
Query 2 LEASKGLPSFSYSKPVVKFSTVL*LHKNQSNI**PIPA*PTCMILYSCCTLTSLLRFKLPHRFIKHDGIMTGFQWDFG*ERI**EFPIWFGPPQFGSLNLGLRKFETLSDSHKEGY*IISFMPWVNAFKPLTCIAQLLTSSTSMLIKELLSHFITTTHLPILFQGHFTHPPGPG*LQITQGDVGFKPFFI*AF*L 586 LEASKGLPSFSYSKPVVKFSTVL*LH+NQSNI* PIPA*PTCMILYSCCTLTSLLR KL HRF+KHDGIM GFQWDFG*ERI**EFPIWFGPPQFGS NLGLRK ETLSDSHKEGY*IISFMPWVNAFKPLTCIAQLLTSSTSMLIKELLSH ITTTHLPILFQGHFTHPPGPG* QITQGDVGFKPFFI*AF*L Subject 5156 LEASKGLPSFSYSKPVVKFSTVL*LHENQSNI*QPIPA*PTCMILYSCCTLTSLLRLKLLHRFMKHDGIMAGFQWDFG*ERI**EFPIWFGPPQFGSFNLGLRKLETLSDSHKEGY*IISFMPWVNAFKPLTCIAQLLTSSTSMLIKELLSHIITTTHLPILFQGHFTHPPGPG*FQITQGDVGFKPFFI*AF*L 5740
Range 2: 5156 to 5740 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
432.2 bits(937) | 0.0 | 189/195(97%) | 0/195(0%) | Minus/Plus |
Query 2 ESECSNEEWFKTHIPLSNLESTRARRVGKMALKEYREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKIPLKASHNPIMFDEAVREFXXXXXXXXXATIENHAGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQ 586 ESECSNEEWFKTHIPLSNLESTRAR VGKMALKEYREVRCGY+VTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKIPLKASHN IMF EAV+EFEAK+ASKSAATIENHAGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQ Subject 5156 ESECSNEEWFKTHIPLSNLESTRARWVGKMALKEYREVRCGYDVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKIPLKASHNSIMFHEAVQEFEAKKASKSAATIENHAGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQ 5740
Range 3: 5154 to 5570 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
336.9 bits(729) | 0.0 | 129/139(93%) | 0/139(0%) | Plus/Minus |
Query 172 QTPAPLHQT*WDYDWLSMGFWIGKNLIRISHMVWPASVWQPQPGASKI*DAFGQP*GRLLNHFLYALGKCFQTSHMHCSVAHQFHLYAHQRTVESLHNHNAPPDTLSRPFYPPSWPWLTPNYSGGCGF*TILHLSILTP 588 QTPAPLH+T*W+Y WLSMGFWIGKNLIRISHMVWPASVWQ QPGASK *DAFGQP*GRLLNHFLYALGKCFQTSHMHCSVAHQFHLYAHQR VES HNHNAPPDTLSRPFYPP+WPWL P+YSGGCGF*TILHLSILTP Subject 5154 QTPAPLHET*WNYGWLSMGFWIGKNLIRISHMVWPASVWQLQPGASKT*DAFGQP*GRLLNHFLYALGKCFQTSHMHCSVAHQFHLYAHQRIVESHHNHNAPPDTLSRPFYPPTWPWLIPDYSGGCGF*TILHLSILTP 5570
Range 4: 5617 to 5739 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
100.0 bits(212) | 0.0 | 40/41(98%) | 0/41(0%) | Plus/Minus |
Query 3 WKQARVCPALATLSLLSNLVQCCDFIKIRATSNSQSLHDLP 125 WKQARVCPALATLSLLSNLVQCCDF+KIRATSNSQSLHDLP Subject 5617 WKQARVCPALATLSLLSNLVQCCDFMKIRATSNSQSLHDLP 5739
Range 5: 5248 to 5739 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
349.3 bits(756) | 0.0 | 153/164(93%) | 0/164(0%) | Minus/Plus |
Query 3 LERVSGGALWL*SDSTVL**A*RWNW*ATEQCM*EV*KHLPKA*RK*FNNLPYGCPKASQIFEAPG*GCQTEAGQTIWEILIRFFPIQNPIESQS*SHHV**SGAGV*SEGG**ECSNYRESCR*VMQGLAIRCCSDFYEVTTLY*I*QQA*SS*SWANPCLLP 494 LERVSGGALWL* DST+L**A*RWNW*ATEQCM*EV*KHLPKA*RK*FNNLPYGCPKASQ+FEAPG* CQTEAGQTIWEILIRFFPIQNPIESQ * HHV *SGAGV* E G**ECSNYRESCR*VMQGLA+RCCSDF+EVTTLY*I*QQA*SS*SWANPCLLP Subject 5248 LERVSGGALWL*CDSTIL**A*RWNW*ATEQCM*EV*KHLPKA*RK*FNNLPYGCPKASQVFEAPG*SCQTEAGQTIWEILIRFFPIQNPIESQP*FHHVS*SGAGV*GEEG**ECSNYRESCR*VMQGLAVRCCSDFHEVTTLY*I*QQA*SS*SWANPCLLP 5739
Range 6: 5155 to 5202 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
39.6 bits(80) | 0.0 | 16/16(100%) | 0/16(0%) | Minus/Plus |
Query 540 GVRMLK*RMV*NPHPP 587 GVRMLK*RMV*NPHPP Subject 5155 GVRMLK*RMV*NPHPP 5202
Range 7: 5157 to 5681 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
346.1 bits(749) | 0.0 | 164/175(94%) | 0/175(0%) | Minus/Plus |
Query 61 SQNAQMKNGLKPTSP*VIWSQPGPGGWVKWP*KSIGRCVVVMK*LNSSLMSIEVELVSN*AMHVRGLKAFTQGIKEMIQ*PSLWLSESVSNFRSPRLRLPN*GGPNHMGNSY*ILSYPKSH*KPVIIPSCLMKRCGSLKXXXXXXXXXXXRIMQVGHAGIGY*MLL*FL*SHNTV 585 SQNAQMKNGLKPTSP*VIW+QPGPGGWVKWP*KSIGRCVVVM *LN+SLMSIEVELVSN*AMHVRGLKAFTQGIKEMIQ*PSLWLSESVS+FRSPRL+LPN*GGPNHMGNSY*ILSYPKSH*KP IIPSC MKRC SL+RRRLVRVQQL*RIMQVGHAGIG *MLL*F *SHNTV Subject 5157 SQNAQMKNGLKPTSP*VIWNQPGPGGWVKWP*KSIGRCVVVMM*LNNSLMSIEVELVSN*AMHVRGLKAFTQGIKEMIQ*PSLWLSESVSSFRSPRLKLPN*GGPNHMGNSY*ILSYPKSH*KPAIIPSCFMKRCRSLRRRRLVRVQQL*RIMQVGHAGIGC*MLL*FS*SHNTV 5681
Range 8: 5155 to 5568 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
264.5 bits(571) | 0.0 | 132/138(96%) | 0/138(0%) | Plus/Minus |
Query 174 NSRTASSNMMGL*LAFNGILDRKESNKNFPYGLARLSLAASTWGFENLRRFRTAIRKVIESFPLCLG*MLSNLSHAXXXXXXXXXXXXXKNC*VTS*PQRTSRYSFKAILPTLLALVDSKLLRGMWVLNHSSFEHSDS 587 NS TAS NMM L LAFNGILDRKESNKNFPYGLARLSLAASTWGFENLRRFRTAIRKVIESFPLCLG*MLSNLSHALLSCSPVPPLCSSKNC*VTS*PQRTSRYSFKAILPT LALVDS+LLRGMWVLNHSSFEHSDS Subject 5155 NSCTAS*NMMELWLAFNGILDRKESNKNFPYGLARLSLAASTWGFENLRRFRTAIRKVIESFPLCLG*MLSNLSHALLSCSPVPPLCSSKNC*VTS*PQRTSRYSFKAILPTHLALVDSRLLRGMWVLNHSSFEHSDS 5568
Grapevine rupestris stem pitting associated virus isolate ISA BR replicase, 24.4 kDa protein, 12.8 kDa protein, 8.4 kDa protein, and 28 kDa protein genes, complete cds
Sequence ID: KX925555.1 Length: 8659 Number of Matches: 9
Range 1: 5148 to 5732 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
437.3 bits(948) | 0.0 | 185/195(95%) | 0/195(0%) | Plus/Minus |
Query 2 LEASKGLPSFSYSKPVVKFSTVL*LHKNQSNI**PIPA*PTCMILYSCCTLTSLLRFKLPHRFIKHDGIMTGFQWDFG*ERI**EFPIWFGPPQFGSLNLGLRKFETLSDSHKEGY*IISFMPWVNAFKPLTCIAQLLTSSTSMLIKELLSHFITTTHLPILFQGHFTHPPGPG*LQITQGDVGFKPFFI*AF*L 586 LEASKGLPSFSYSKPVVKF TVL*LHKNQ NI* PIPA*PTCMILYS CTLTSLLR KL HRF+KHDGIMTGFQWDFG*ERI**EFPIWFGPPQFGS NLGLRKFETLSDSHK+GY*IISFMPWVNAFKPLTCIAQLLTS TSMLIKELLSHFITTTHLPILFQGHFTHPPGPG*LQITQGDVGFKPFFI*AF*L Subject 5148 LEASKGLPSFSYSKPVVKFGTVL*LHKNQGNI*QPIPA*PTCMILYSSCTLTSLLRLKLLHRFMKHDGIMTGFQWDFG*ERI**EFPIWFGPPQFGSFNLGLRKFETLSDSHKKGY*IISFMPWVNAFKPLTCIAQLLTSPTSMLIKELLSHFITTTHLPILFQGHFTHPPGPG*LQITQGDVGFKPFFI*AF*L 5732
Range 2: 5148 to 5732 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
433.6 bits(940) | 0.0 | 190/195(97%) | 0/195(0%) | Minus/Plus |
Query 2 ESECSNEEWFKTHIPLSNLESTRARRVGKMALKEYREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKIPLKASHNPIMFDEAVREFXXXXXXXXXATIENHAGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQ 586 ESECSNEEWFKTHIPLSNLESTRAR VGKMALKEYREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKIPLKASHN IMF EAV+EFEAK+ASKSAATIENHAGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQ Subject 5148 ESECSNEEWFKTHIPLSNLESTRARWVGKMALKEYREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKIPLKASHNSIMFHEAVQEFEAKKASKSAATIENHAGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQ 5732
Range 3: 5146 to 5562 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
343.3 bits(743) | 0.0 | 132/139(95%) | 0/139(0%) | Plus/Minus |
Query 172 QTPAPLHQT*WDYDWLSMGFWIGKNLIRISHMVWPASVWQPQPGASKI*DAFGQP*GRLLNHFLYALGKCFQTSHMHCSVAHQFHLYAHQRTVESLHNHNAPPDTLSRPFYPPSWPWLTPNYSGGCGF*TILHLSILTP 588 QTPAPLH+T*W+YDWLSMGFWIGKNLIRISHMVWPASVWQ QPGASKI*DAFGQP* RLLNHFLYALGKCFQTSHMHCSVAHQ HLYAHQR VESLHNHNAPPDTLSRPFYPP+WPWLTPNYSGGCGF*TILHLSILTP Subject 5146 QTPAPLHET*WNYDWLSMGFWIGKNLIRISHMVWPASVWQLQPGASKI*DAFGQP*ERLLNHFLYALGKCFQTSHMHCSVAHQSHLYAHQRIVESLHNHNAPPDTLSRPFYPPTWPWLTPNYSGGCGF*TILHLSILTP 5562
Range 4: 5609 to 5731 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.4 bits(215) | 0.0 | 41/41(100%) | 0/41(0%) | Plus/Minus |
Query 3 WKQARVCPALATLSLLSNLVQCCDFIKIRATSNSQSLHDLP 125 WKQARVCPALATLSLLSNLVQCCDFIKIRATSNSQSLHDLP Subject 5609 WKQARVCPALATLSLLSNLVQCCDFIKIRATSNSQSLHDLP 5731
Range 5: 5240 to 5731 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
342.4 bits(741) | 0.0 | 152/164(93%) | 0/164(0%) | Minus/Plus |
Query 3 LERVSGGALWL*SDSTVL**A*RWNW*ATEQCM*EV*KHLPKA*RK*FNNLPYGCPKASQIFEAPG*GCQTEAGQTIWEILIRFFPIQNPIESQS*SHHV**SGAGV*SEGG**ECSNYRESCR*VMQGLAIRCCSDFYEVTTLY*I*QQA*SS*SWANPCLLP 494 LERVSGGALWL*SDST+L**A*RW+W*ATEQCM*EV*KHLPKA*RK*FNNL YGCPKASQIFEAPG* CQTEAGQTIWEILIRFFPIQNPIESQS* HHV *SGAGV* E G**ECS YRESCR*VMQGLA+RCC DFYEVTTLY I*QQA*SS*SWANPCLLP Subject 5240 LERVSGGALWL*SDSTIL**A*RWDW*ATEQCM*EV*KHLPKA*RK*FNNLSYGCPKASQIFEAPG*SCQTEAGQTIWEILIRFFPIQNPIESQS*FHHVS*SGAGV*GEEG**ECSYYRESCR*VMQGLAVRCCPDFYEVTTLYQI*QQA*SS*SWANPCLLP 5731
Range 6: 5147 to 5194 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
39.6 bits(80) | 0.0 | 16/16(100%) | 0/16(0%) | Minus/Plus |
Query 540 GVRMLK*RMV*NPHPP 587 GVRMLK*RMV*NPHPP Subject 5147 GVRMLK*RMV*NPHPP 5194
Range 7: 5149 to 5673 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
347.9 bits(753) | 0.0 | 165/175(94%) | 0/175(0%) | Minus/Plus |
Query 61 SQNAQMKNGLKPTSP*VIWSQPGPGGWVKWP*KSIGRCVVVMK*LNSSLMSIEVELVSN*AMHVRGLKAFTQGIKEMIQ*PSLWLSESVSNFRSPRLRLPN*GGPNHMGNSY*ILSYPKSH*KPVIIPSCLMKRCGSLKXXXXXXXXXXXRIMQVGHAGIGY*MLL*FL*SHNTV 585 SQNAQMKNGLKPTSP*VIWSQPGPGGWVKWP*KSIGRCVVVMK*LN+SLMSIEV LVSN*AMHVRGLKAFTQGIKEMIQ*P LWLSESVSNFRSPRL+LPN*GGPNHMGNSY*ILSYPKSH*KPVIIPSC MKRC SL+RRRLVRVQ L*RIMQVGHAGIG *ML *FL*SHNTV Subject 5149 SQNAQMKNGLKPTSP*VIWSQPGPGGWVKWP*KSIGRCVVVMK*LNNSLMSIEVGLVSN*AMHVRGLKAFTQGIKEMIQ*PFLWLSESVSNFRSPRLKLPN*GGPNHMGNSY*ILSYPKSH*KPVIIPSCFMKRCRSLRRRRLVRVQLL*RIMQVGHAGIGC*MLP*FL*SHNTV 5673
Range 8: 5147 to 5560 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
268.2 bits(579) | 0.0 | 134/138(97%) | 0/138(0%) | Plus/Minus |
Query 174 NSRTASSNMMGL*LAFNGILDRKESNKNFPYGLARLSLAASTWGFENLRRFRTAIRKVIESFPLCLG*MLSNLSHAXXXXXXXXXXXXXKNC*VTS*PQRTSRYSFKAILPTLLALVDSKLLRGMWVLNHSSFEHSDS 587 NS TAS NMM L*LAFNGILDRKESNKNFPYGLARLSLAASTWGFENLRRFRTAIRKVIESFPLCLG*MLSNLSHALLSCSPVPPLCSSKNC*VTS*PQRTSRYSFKAILPT LALVDSKLLRGMWVLNHSSFEHSDS Subject 5147 NSCTAS*NMMEL*LAFNGILDRKESNKNFPYGLARLSLAASTWGFENLRRFRTAIRKVIESFPLCLG*MLSNLSHALLSCSPVPPLCSSKNC*VTS*PQRTSRYSFKAILPTHLALVDSKLLRGMWVLNHSSFEHSDS 5560
Grapevine Rupestris stem pitting associated virus, complete genome
Sequence ID: AF026278.1 Length: 8725 Number of Matches: 9
Range 1: 5164 to 5748 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
434.1 bits(941) | 0.0 | 186/195(95%) | 0/195(0%) | Plus/Minus |
Query 2 LEASKGLPSFSYSKPVVKFSTVL*LHKNQSNI**PIPA*PTCMILYSCCTLTSLLRFKLPHRFIKHDGIMTGFQWDFG*ERI**EFPIWFGPPQFGSLNLGLRKFETLSDSHKEGY*IISFMPWVNAFKPLTCIAQLLTSSTSMLIKELLSHFITTTHLPILFQGHFTHPPGPG*LQITQGDVGFKPFFI*AF*L 586 LEASKGLPSFSYSKPVVKFSTVL*LHKNQSNI* PIPA*PTCMILYS CTLTSLLR KL HRF+KHDGIMTGF WD G*ERI**EFPIWFGPPQFGS NL LRKFETLSDSHKEGY*IISFMPWVNAFKPLTCIAQLLTSSTSMLIKELLSHFITTTHLPILFQGHFTHPPGPG*LQITQGDVGFKPFFI*AF*L Subject 5164 LEASKGLPSFSYSKPVVKFSTVL*LHKNQSNI*QPIPA*PTCMILYSRCTLTSLLRLKLLHRFLKHDGIMTGF*WDLG*ERI**EFPIWFGPPQFGSFNLRLRKFETLSDSHKEGY*IISFMPWVNAFKPLTCIAQLLTSSTSMLIKELLSHFITTTHLPILFQGHFTHPPGPG*LQITQGDVGFKPFFI*AF*L 5748
Range 2: 5164 to 5748 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
434.1 bits(941) | 0.0 | 190/195(97%) | 0/195(0%) | Minus/Plus |
Query 2 ESECSNEEWFKTHIPLSNLESTRARRVGKMALKEYREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKIPLKASHNPIMFDEAVREFXXXXXXXXXATIENHAGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQ 586 ESECSNEEWFKTHIPLSNLESTRAR VGKMALKEYREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKIPLKASHN IMF EAV+EFEAK+ASKSAATIENHAGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQ Subject 5164 ESECSNEEWFKTHIPLSNLESTRARWVGKMALKEYREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKIPLKASHNSIMFQEAVQEFEAKKASKSAATIENHAGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQ 5748
Range 3: 5162 to 5578 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
336.0 bits(727) | 0.0 | 130/139(94%) | 0/139(0%) | Plus/Minus |
Query 172 QTPAPLHQT*WDYDWLSMGFWIGKNLIRISHMVWPASVWQPQPGASKI*DAFGQP*GRLLNHFLYALGKCFQTSHMHCSVAHQFHLYAHQRTVESLHNHNAPPDTLSRPFYPPSWPWLTPNYSGGCGF*TILHLSILTP 588 QTPAPL +T*W+YDWL MG WIGKNLIRISHMVWPASVWQ QP ASKI*DAFGQP*GRLLNHFLYALGKCFQTSHMHCSVAHQFHLYAHQR VESLHNHNAPPDTLSRPFYPP+WPWLTPNYSGGCGF*TILHLSILTP Subject 5162 QTPAPLPET*WNYDWLLMGSWIGKNLIRISHMVWPASVWQLQPEASKI*DAFGQP*GRLLNHFLYALGKCFQTSHMHCSVAHQFHLYAHQRIVESLHNHNAPPDTLSRPFYPPTWPWLTPNYSGGCGF*TILHLSILTP 5578
Range 4: 5625 to 5747 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.4 bits(215) | 0.0 | 41/41(100%) | 0/41(0%) | Plus/Minus |
Query 3 WKQARVCPALATLSLLSNLVQCCDFIKIRATSNSQSLHDLP 125 WKQARVCPALATLSLLSNLVQCCDFIKIRATSNSQSLHDLP Subject 5625 WKQARVCPALATLSLLSNLVQCCDFIKIRATSNSQSLHDLP 5747
Range 5: 5256 to 5747 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
344.3 bits(745) | 0.0 | 152/164(93%) | 0/164(0%) | Minus/Plus |
Query 3 LERVSGGALWL*SDSTVL**A*RWNW*ATEQCM*EV*KHLPKA*RK*FNNLPYGCPKASQIFEAPG*GCQTEAGQTIWEILIRFFPIQNPIESQS*SHHV**SGAGV*SEGG**ECSNYRESCR*VMQGLAIRCCSDFYEVTTLY*I*QQA*SS*SWANPCLLP 494 LERVSGGALWL*SDST+L**A*RWNW*ATEQCM*EV*KHLPKA*RK*FNNLPYGCPKASQIFEA G* CQTEAGQTIWEILIRFFPIQ+PI+SQS* HHV SGAGV* E G**ECS+YRESCR*VMQGLA+RCCSDFYEVTTLY*I*QQA*SS*SWANPCLLP Subject 5256 LERVSGGALWL*SDSTIL**A*RWNW*ATEQCM*EV*KHLPKA*RK*FNNLPYGCPKASQIFEASG*SCQTEAGQTIWEILIRFFPIQDPIKSQS*FHHVSGSGAGV*GEEG**ECSDYRESCR*VMQGLAVRCCSDFYEVTTLY*I*QQA*SS*SWANPCLLP 5747
Range 6: 5163 to 5210 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
39.6 bits(80) | 0.0 | 16/16(100%) | 0/16(0%) | Minus/Plus |
Query 540 GVRMLK*RMV*NPHPP 587 GVRMLK*RMV*NPHPP Subject 5163 GVRMLK*RMV*NPHPP 5210
Range 7: 5165 to 5689 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
348.4 bits(754) | 0.0 | 165/175(94%) | 0/175(0%) | Minus/Plus |
Query 61 SQNAQMKNGLKPTSP*VIWSQPGPGGWVKWP*KSIGRCVVVMK*LNSSLMSIEVELVSN*AMHVRGLKAFTQGIKEMIQ*PSLWLSESVSNFRSPRLRLPN*GGPNHMGNSY*ILSYPKSH*KPVIIPSCLMKRCGSLKXXXXXXXXXXXRIMQVGHAGIGY*MLL*FL*SHNTV 585 SQNAQMKNGLKPTSP*VIWSQPGPGGWVKWP*KSIGRCVVVMK*LN+SLMSIEVELVSN*AMHVRGLKAFTQGIKEMIQ*PSLWLSESVSNFRS RL+LPN*GGPNHMGNSY*ILSYP+SH*KPVIIPSC KRC SL+RRRLVRVQ+L*RIMQVGHAGIG *MLL*FL*SHNTV Subject 5165 SQNAQMKNGLKPTSP*VIWSQPGPGGWVKWP*KSIGRCVVVMK*LNNSLMSIEVELVSN*AMHVRGLKAFTQGIKEMIQ*PSLWLSESVSNFRSLRLKLPN*GGPNHMGNSY*ILSYPRSH*KPVIIPSCFRKRCRSLRRRRLVRVQRL*RIMQVGHAGIGC*MLL*FL*SHNTV 5689
Range 8: 5163 to 5576 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
261.3 bits(564) | 0.0 | 133/138(96%) | 0/138(0%) | Plus/Minus |
Query 174 NSRTASSNMMGL*LAFNGILDRKESNKNFPYGLARLSLAASTWGFENLRRFRTAIRKVIESFPLCLG*MLSNLSHAXXXXXXXXXXXXXKNC*VTS*PQRTSRYSFKAILPTLLALVDSKLLRGMWVLNHSSFEHSDS 587 NS TAS NMM L*LAFNGILDRKESNKNFPYGLARLSLAAST GFENLRRFRTAIRKVIESFPLCLG*MLSNLSHALLSCSPVPPLCSSKNC*VTS*PQRTSRYSFKAILPT LALVDSKLLRGMWVLNHSSFEHSDS Subject 5163 NSCTAS*NMMEL*LAFNGILDRKESNKNFPYGLARLSLAAST*GFENLRRFRTAIRKVIESFPLCLG*MLSNLSHALLSCSPVPPLCSSKNC*VTS*PQRTSRYSFKAILPTHLALVDSKLLRGMWVLNHSSFEHSDS 5576
Nucleotide Sequence (440 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
320.4 | 1797.8 | 42% | 8.062e-86 | 92% | AF057136.1 | |
320.4 | 1797.8 | 42% | 8.062e-86 | 92% | NC_001948.1 | |
320.4 | 1797.4 | 42% | 8.062e-86 | 92% | JX513892.1 | |
316.8 | 1782.7 | 42% | 1.023e-84 | 91% | KT000368.1 | |
316.3 | 1779.1 | 37% | 1.406e-84 | 92% | JQ922417.1 |
Alignments
Rupestris stem pitting associated virus 1, complete genome
Sequence ID: AF057136.1 Length: 8744 Number of Matches: 8
Range 1: 7028 to 7423 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
320.4 bits(693) | 0.0 | 130/132(98%) | 0/132(0%) | Plus/Plus |
Query 45 TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWLGHWACAAFSEEVKSALFRGQHPSIPSRWALQRRYKKYNLL 440 TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWLGHWACAAFSEEVKS LFRGQHPSIPSRWALQ RYKKYNLL Subject 7028 TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWLGHWACAAFSEEVKSTLFRGQHPSIPSRWALQGRYKKYNLL 7423
Range 2: 7012 to 7422 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
315.4 bits(682) | 0.0 | 133/137(97%) | 0/137(0%) | Minus/Minus |
Query 29 SKLYFLYRLCNAHREGIDGCCPLNKADLTSSENAAQAQCPSQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSEL*ATARSTASLPKHINTPSTSSVKGDPT 439 SKLYFLYR CNAHREGIDGCCPLNK DLTSSENAAQAQCPSQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSEL ATARSTASLPKHI+TPSTSSVKGDPT Subject 7012 SKLYFLYRPCNAHREGIDGCCPLNKVDLTSSENAAQAQCPSQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSELCATARSTASLPKHISTPSTSSVKGDPT 7422
Range 3: 6989 to 7423 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
313.6 bits(678) | 0.0 | 134/145(92%) | 0/145(0%) | Minus/Minus |
Query 6 Q*VILFVPSL*RPP*GN*WMLSPE*GRFDLLRKCSTSPMPKPTVNGVMVFAQFTGG*KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVVSNSEIHCLLTKAY*HPFNI*CKRRPHTSPKHTLS 440 Q*VILFVPSL*RPP*GN*WMLSPE*GRFD LRKCSTSPMPKPTVNGVMVFAQF G *KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVV NSEIHCLLTKAY*HPFNI*CKRRPH T++ Subject 6989 Q*VILFVPSL*RPP*GN*WMLSPE*GRFDFLRKCSTSPMPKPTVNGVMVFAQFAGC*KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVVRNSEIHCLLTKAY*HPFNI*CKRRPHNDFVQTVT 7423
Range 4: 7011 to 7421 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
291.6 bits(630) | 0.0 | 132/137(96%) | 0/137(0%) | Plus/Plus |
Query 28 VWGRLLH*MLKGC*YALVRRQWIXXXXXXXXXXYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQPPVNWAKTITPLTVGLGIGLVLHFLRRSNLPYSGDNIHQFPHGGRYRDGTKSITY 438 +WGRLLH*MLKGC*YALVRRQWISLL TTLNSNYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQ P NWAKTITPLTVGLGIGLVLHFLR+SNLPYSGDNIHQFPHGGRYRDGTKSITY Subject 7011 LWGRLLH*MLKGC*YALVRRQWISLLRTTLNSNYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQQPANWAKTITPLTVGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITY 7421
Range 5: 7149 to 7421 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
201.3 bits(433) | 0.0 | 86/91(95%) | 0/91(0%) | Minus/Minus |
Query 166 VSYTFCTVSVTPTVRELMDVVP*IRQI*PPQKMQHKPNAQANCQWSYGFCPIHRRLKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKE 438 VSYTFCTV VTPTVRELMDVVP*IR I* PQKMQHKPNAQANCQWSYGFCPI R LKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKE Subject 7149 VSYTFCTVPVTPTVRELMDVVP*IR*I*LPQKMQHKPNAQANCQWSYGFCPIRRLLKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKE 7421
Range 6: 7014 to 7118 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.4 bits(167) | 0.0 | 33/35(94%) | 0/35(0%) | Minus/Minus |
Query 31 HKVI*IQSCEQQRDPLPPYQSILTPLQHLV*KATP 135 HKVI*IQSC QQRDPLPPYQSIL PLQHLV*KATP Subject 7014 HKVI*IQSCAQQRDPLPPYQSILAPLQHLV*KATP 7118
Range 7: 7156 to 7422 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
192.1 bits(413) | 0.0 | 84/89(94%) | 0/89(0%) | Plus/Plus |
Query 173 EIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFSRL*IGQKP*LH*QLAWALGLCCIF*GGQICLIQGTTSINSLTVGVTETVQKV*LT 439 EIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFS L IGQKP*LH*QLAWALGLCCIF*G QI LIQGTTSINSLTVGVT TVQKV*LT Subject 7156 EIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFSSLRIGQKP*LH*QLAWALGLCCIF*GSQIYLIQGTTSINSLTVGVTGTVQKV*LT 7422
Rupestris stem pitting associated virus 1, complete genome
Sequence ID: NC_001948.1 Length: 8744 Number of Matches: 8
Range 1: 7028 to 7423 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
320.4 bits(693) | 0.0 | 130/132(98%) | 0/132(0%) | Plus/Plus |
Query 45 TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWLGHWACAAFSEEVKSALFRGQHPSIPSRWALQRRYKKYNLL 440 TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWLGHWACAAFSEEVKS LFRGQHPSIPSRWALQ RYKKYNLL Subject 7028 TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWLGHWACAAFSEEVKSTLFRGQHPSIPSRWALQGRYKKYNLL 7423
Range 2: 7012 to 7422 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
315.4 bits(682) | 0.0 | 133/137(97%) | 0/137(0%) | Minus/Minus |
Query 29 SKLYFLYRLCNAHREGIDGCCPLNKADLTSSENAAQAQCPSQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSEL*ATARSTASLPKHINTPSTSSVKGDPT 439 SKLYFLYR CNAHREGIDGCCPLNK DLTSSENAAQAQCPSQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSEL ATARSTASLPKHI+TPSTSSVKGDPT Subject 7012 SKLYFLYRPCNAHREGIDGCCPLNKVDLTSSENAAQAQCPSQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSELCATARSTASLPKHISTPSTSSVKGDPT 7422
Range 3: 6989 to 7423 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
313.6 bits(678) | 0.0 | 134/145(92%) | 0/145(0%) | Minus/Minus |
Query 6 Q*VILFVPSL*RPP*GN*WMLSPE*GRFDLLRKCSTSPMPKPTVNGVMVFAQFTGG*KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVVSNSEIHCLLTKAY*HPFNI*CKRRPHTSPKHTLS 440 Q*VILFVPSL*RPP*GN*WMLSPE*GRFD LRKCSTSPMPKPTVNGVMVFAQF G *KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVV NSEIHCLLTKAY*HPFNI*CKRRPH T++ Subject 6989 Q*VILFVPSL*RPP*GN*WMLSPE*GRFDFLRKCSTSPMPKPTVNGVMVFAQFAGC*KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVVRNSEIHCLLTKAY*HPFNI*CKRRPHNDFVQTVT 7423
Range 4: 7011 to 7421 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
291.6 bits(630) | 0.0 | 132/137(96%) | 0/137(0%) | Plus/Plus |
Query 28 VWGRLLH*MLKGC*YALVRRQWIXXXXXXXXXXYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQPPVNWAKTITPLTVGLGIGLVLHFLRRSNLPYSGDNIHQFPHGGRYRDGTKSITY 438 +WGRLLH*MLKGC*YALVRRQWISLL TTLNSNYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQ P NWAKTITPLTVGLGIGLVLHFLR+SNLPYSGDNIHQFPHGGRYRDGTKSITY Subject 7011 LWGRLLH*MLKGC*YALVRRQWISLLRTTLNSNYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQQPANWAKTITPLTVGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITY 7421
Range 5: 7149 to 7421 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
201.3 bits(433) | 0.0 | 86/91(95%) | 0/91(0%) | Minus/Minus |
Query 166 VSYTFCTVSVTPTVRELMDVVP*IRQI*PPQKMQHKPNAQANCQWSYGFCPIHRRLKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKE 438 VSYTFCTV VTPTVRELMDVVP*IR I* PQKMQHKPNAQANCQWSYGFCPI R LKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKE Subject 7149 VSYTFCTVPVTPTVRELMDVVP*IR*I*LPQKMQHKPNAQANCQWSYGFCPIRRLLKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKE 7421
Range 6: 7014 to 7118 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.4 bits(167) | 0.0 | 33/35(94%) | 0/35(0%) | Minus/Minus |
Query 31 HKVI*IQSCEQQRDPLPPYQSILTPLQHLV*KATP 135 HKVI*IQSC QQRDPLPPYQSIL PLQHLV*KATP Subject 7014 HKVI*IQSCAQQRDPLPPYQSILAPLQHLV*KATP 7118
Range 7: 7156 to 7422 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
192.1 bits(413) | 0.0 | 84/89(94%) | 0/89(0%) | Plus/Plus |
Query 173 EIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFSRL*IGQKP*LH*QLAWALGLCCIF*GGQICLIQGTTSINSLTVGVTETVQKV*LT 439 EIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFS L IGQKP*LH*QLAWALGLCCIF*G QI LIQGTTSINSLTVGVT TVQKV*LT Subject 7156 EIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFSSLRIGQKP*LH*QLAWALGLCCIF*GSQIYLIQGTTSINSLTVGVTGTVQKV*LT 7422
Grapevine rupestris stem pitting associated virus isolate GRSPAV 1050 02 RNA dependent RNA polymerase (RdRp) gene, partial cds; and triple gene block 1 (TGB1), triple gene block 2 (TGB2), triple gene block 3 (TGB3), coat protein (CP), and 14 kDa protein (14K) genes, complete cds
Sequence ID: JX513892.1 Length: 8716 Number of Matches: 8
Range 1: 7019 to 7414 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
320.4 bits(693) | 0.0 | 130/132(98%) | 0/132(0%) | Plus/Plus |
Query 45 TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWLGHWACAAFSEEVKSALFRGQHPSIPSRWALQRRYKKYNLL 440 TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWLGHWACAAFSEEVKS LFRGQHPSIPSRWALQ RYKKYNLL Subject 7019 TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWLGHWACAAFSEEVKSTLFRGQHPSIPSRWALQGRYKKYNLL 7414
Range 2: 7003 to 7413 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
315.4 bits(682) | 0.0 | 133/137(97%) | 0/137(0%) | Minus/Minus |
Query 29 SKLYFLYRLCNAHREGIDGCCPLNKADLTSSENAAQAQCPSQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSEL*ATARSTASLPKHINTPSTSSVKGDPT 439 SKLYFLYR CNAHREGIDGCCPLNK DLTSSENAAQAQCPSQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSEL ATARSTASLPKHI+TPSTSSVKGDPT Subject 7003 SKLYFLYRPCNAHREGIDGCCPLNKVDLTSSENAAQAQCPSQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSELCATARSTASLPKHISTPSTSSVKGDPT 7413
Range 3: 6980 to 7414 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
313.6 bits(678) | 0.0 | 134/145(92%) | 0/145(0%) | Minus/Minus |
Query 6 Q*VILFVPSL*RPP*GN*WMLSPE*GRFDLLRKCSTSPMPKPTVNGVMVFAQFTGG*KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVVSNSEIHCLLTKAY*HPFNI*CKRRPHTSPKHTLS 440 Q*VILFVPSL*RPP*GN*WMLSPE*GRFD LRKCSTSPMPKPTVNGVMVFAQF G *KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVV NSEIHCLLTKAY*HPFNI*CKRRPH T++ Subject 6980 Q*VILFVPSL*RPP*GN*WMLSPE*GRFDFLRKCSTSPMPKPTVNGVMVFAQFAGC*KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVVCNSEIHCLLTKAY*HPFNI*CKRRPHNDFVQTVT 7414
Range 4: 7002 to 7412 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
291.6 bits(630) | 0.0 | 132/137(96%) | 0/137(0%) | Plus/Plus |
Query 28 VWGRLLH*MLKGC*YALVRRQWIXXXXXXXXXXYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQPPVNWAKTITPLTVGLGIGLVLHFLRRSNLPYSGDNIHQFPHGGRYRDGTKSITY 438 +WGRLLH*MLKGC*YALVRRQWISLL TTLNSNYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQ P NWAKTITPLTVGLGIGLVLHFLR+SNLPYSGDNIHQFPHGGRYRDGTKSITY Subject 7002 LWGRLLH*MLKGC*YALVRRQWISLLHTTLNSNYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQQPANWAKTITPLTVGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITY 7412
Range 5: 7140 to 7412 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
201.3 bits(433) | 0.0 | 86/91(95%) | 0/91(0%) | Minus/Minus |
Query 166 VSYTFCTVSVTPTVRELMDVVP*IRQI*PPQKMQHKPNAQANCQWSYGFCPIHRRLKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKE 438 VSYTFCTV VTPTVRELMDVVP*IR I* PQKMQHKPNAQANCQWSYGFCPI R LKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKE Subject 7140 VSYTFCTVPVTPTVRELMDVVP*IR*I*LPQKMQHKPNAQANCQWSYGFCPIRRLLKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKE 7412
Range 6: 7005 to 7109 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.0 bits(166) | 0.0 | 33/35(94%) | 0/35(0%) | Minus/Minus |
Query 31 HKVI*IQSCEQQRDPLPPYQSILTPLQHLV*KATP 135 HKVI*IQSC QQRDPLPPYQSIL PLQHLV*KATP Subject 7005 HKVI*IQSCVQQRDPLPPYQSILAPLQHLV*KATP 7109
Range 7: 7147 to 7413 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
192.1 bits(413) | 0.0 | 84/89(94%) | 0/89(0%) | Plus/Plus |
Query 173 EIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFSRL*IGQKP*LH*QLAWALGLCCIF*GGQICLIQGTTSINSLTVGVTETVQKV*LT 439 EIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFS L IGQKP*LH*QLAWALGLCCIF*G QI LIQGTTSINSLTVGVT TVQKV*LT Subject 7147 EIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFSSLRIGQKP*LH*QLAWALGLCCIF*GSQIYLIQGTTSINSLTVGVTGTVQKV*LT 7413
UNVERIFIED: Grapevine rupestris stem pitting associated virus isolate TI_30 genomic sequence
Sequence ID: KT000368.1 Length: 8568 Number of Matches: 8
Range 1: 6908 to 7303 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
316.8 bits(685) | 0.0 | 128/132(97%) | 0/132(0%) | Plus/Plus |
Query 45 TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWLGHWACAAFSEEVKSALFRGQHPSIPSRWALQRRYKKYNLL 440 TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFN+VTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSW GHWACAAFSEEVKS LFRGQHPSIPSRWALQ RYKKYNLL Subject 6908 TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNIVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWPGHWACAAFSEEVKSTLFRGQHPSIPSRWALQGRYKKYNLL 7303
Range 2: 6892 to 7302 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
310.8 bits(672) | 0.0 | 131/137(96%) | 0/137(0%) | Minus/Minus |
Query 29 SKLYFLYRLCNAHREGIDGCCPLNKADLTSSENAAQAQCPSQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSEL*ATARSTASLPKHINTPSTSSVKGDPT 439 SKLYFLYR CNAHREGIDGCCPLNK DLTSSENAAQAQCP QLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVT LKVEPLTSQGNLNSEL ATARSTASLPKHI+TPSTSSVKGDPT Subject 6892 SKLYFLYRPCNAHREGIDGCCPLNKVDLTSSENAAQAQCPGQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTMLKVEPLTSQGNLNSELCATARSTASLPKHISTPSTSSVKGDPT 7302
Range 3: 6869 to 7303 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
309.4 bits(669) | 0.0 | 132/145(91%) | 0/145(0%) | Minus/Minus |
Query 6 Q*VILFVPSL*RPP*GN*WMLSPE*GRFDLLRKCSTSPMPKPTVNGVMVFAQFTGG*KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVVSNSEIHCLLTKAY*HPFNI*CKRRPHTSPKHTLS 440 Q*VILFVPSL*RPP*GN*WMLSPE*GRFD LRKCSTSPMP+PTVNGVMVFAQF G *KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR* EFRVV NSEIHCLLTKAY*HPFNI*CKRRPH T++ Subject 6869 Q*VILFVPSL*RPP*GN*WMLSPE*GRFDFLRKCSTSPMPRPTVNGVMVFAQFAGC*KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*LEFRVVRNSEIHCLLTKAY*HPFNI*CKRRPHNDFVQTVT 7303
Range 4: 6891 to 7301 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
291.6 bits(630) | 0.0 | 131/137(96%) | 0/137(0%) | Plus/Plus |
Query 28 VWGRLLH*MLKGC*YALVRRQWIXXXXXXXXXXYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQPPVNWAKTITPLTVGLGIGLVLHFLRRSNLPYSGDNIHQFPHGGRYRDGTKSITY 438 +WGRLLH*MLKGC*YALVRRQWISLL TTLNS+YLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQ P NWAKTITPLTVGLGIGLVLHFLR+SNLPYSGDNIHQFPHGGRYRDGTKSITY Subject 6891 LWGRLLH*MLKGC*YALVRRQWISLLRTTLNSSYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQQPANWAKTITPLTVGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITY 7301
Range 5: 7029 to 7301 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
201.3 bits(433) | 0.0 | 86/91(95%) | 0/91(0%) | Minus/Minus |
Query 166 VSYTFCTVSVTPTVRELMDVVP*IRQI*PPQKMQHKPNAQANCQWSYGFCPIHRRLKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKE 438 VSYTFCTV VTPTVRELMDVVP*IR I* PQKMQHKPNAQANCQWSYGFCPI R LKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKE Subject 7029 VSYTFCTVPVTPTVRELMDVVP*IR*I*LPQKMQHKPNAQANCQWSYGFCPIRRLLKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKE 7301
Range 6: 6894 to 6998 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
77.1 bits(162) | 0.0 | 32/35(91%) | 0/35(0%) | Minus/Minus |
Query 31 HKVI*IQSCEQQRDPLPPYQSILTPLQHLV*KATP 135 HKV *IQSC QQRDPLPPYQSIL PLQHLV*KATP Subject 6894 HKVT*IQSCAQQRDPLPPYQSILAPLQHLV*KATP 6998
Range 7: 7036 to 7302 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
192.1 bits(413) | 0.0 | 84/89(94%) | 0/89(0%) | Plus/Plus |
Query 173 EIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFSRL*IGQKP*LH*QLAWALGLCCIF*GGQICLIQGTTSINSLTVGVTETVQKV*LT 439 EIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFS L IGQKP*LH*QLAWALGLCCIF*G QI LIQGTTSINSLTVGVT TVQKV*LT Subject 7036 EIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFSSLRIGQKP*LH*QLAWALGLCCIF*GSQIYLIQGTTSINSLTVGVTGTVQKV*LT 7302
Grapevine rupestris stem pitting associated virus isolate GRSPaV GG, complete genome
Sequence ID: JQ922417.1 Length: 8758 Number of Matches: 8
Range 1: 7027 to 7422 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
316.3 bits(684) | 0.0 | 128/132(97%) | 0/132(0%) | Plus/Plus |
Query 45 TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWLGHWACAAFSEEVKSALFRGQHPSIPSRWALQRRYKKYNLL 440 TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWLGHW CAAFSEEVKS LFRGQHPSIP RWALQ RYKKYNLL Subject 7027 TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWLGHWTCAAFSEEVKSTLFRGQHPSIPPRWALQGRYKKYNLL 7422
Range 2: 7011 to 7421 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
312.6 bits(676) | 0.0 | 132/137(96%) | 0/137(0%) | Minus/Minus |
Query 29 SKLYFLYRLCNAHREGIDGCCPLNKADLTSSENAAQAQCPSQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSEL*ATARSTASLPKHINTPSTSSVKGDPT 439 SKLYFLYR CNAHR GIDGCCPLNK DLTSSENAAQ QCPSQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSEL ATARSTASLPKHINTPSTSSVKGDPT Subject 7011 SKLYFLYRPCNAHRGGIDGCCPLNKVDLTSSENAAQVQCPSQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSELCATARSTASLPKHINTPSTSSVKGDPT 7421
Range 3: 7012 to 7422 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
310.8 bits(672) | 0.0 | 132/137(96%) | 0/137(0%) | Minus/Minus |
Query 30 Q*VILFVPSL*RPP*GN*WMLSPE*GRFDLLRKCSTSPMPKPTVNGVMVFAQFTGG*KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVVSNSEIHCLLTKAY*HPFNI*CKRRPH 440 Q*VILFVPSL*RPP GN*WMLSPE*GRFD LRKCSTSPMPKPTVNGVMVFAQF G *KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVV NSEIHCLLTKAY*HPFNI*CKRRPH Subject 7012 Q*VILFVPSL*RPPWGN*WMLSPE*GRFDFLRKCSTSPMPKPTVNGVMVFAQFAGC*KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVVRNSEIHCLLTKAY*HPFNI*CKRRPH 7422
Range 4: 7010 to 7420 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
291.6 bits(630) | 0.0 | 132/137(96%) | 0/137(0%) | Plus/Plus |
Query 28 VWGRLLH*MLKGC*YALVRRQWIXXXXXXXXXXYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQPPVNWAKTITPLTVGLGIGLVLHFLRRSNLPYSGDNIHQFPHGGRYRDGTKSITY 438 +WGRLLH*MLKGC*YALVRRQWISLL TTLNSNYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQ P NWAKTITPLTVGLGIGLVLHFLR+SNLPYSGDNIHQFPHGGRYRDGTKSITY Subject 7010 LWGRLLH*MLKGC*YALVRRQWISLLRTTLNSNYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQQPANWAKTITPLTVGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITY 7420
Range 5: 7148 to 7420 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.4 bits(418) | 0.0 | 84/91(92%) | 0/91(0%) | Minus/Minus |
Query 166 VSYTFCTVSVTPTVRELMDVVP*IRQI*PPQKMQHKPNAQANCQWSYGFCPIHRRLKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKE 438 VSYTFCTV VTPTV ELMDVVP*IR I* PQKMQHK NAQANCQWSYGFCPI R LKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKE Subject 7148 VSYTFCTVPVTPTVGELMDVVP*IR*I*LPQKMQHKSNAQANCQWSYGFCPIRRLLKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKE 7420
Range 6: 7013 to 7117 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
81.7 bits(172) | 0.0 | 34/35(97%) | 0/35(0%) | Minus/Minus |
Query 31 HKVI*IQSCEQQRDPLPPYQSILTPLQHLV*KATP 135 HKVI*IQSC QQRDPLPPYQSILTPLQHLV*KATP Subject 7013 HKVI*IQSCAQQRDPLPPYQSILTPLQHLV*KATP 7117
Range 7: 7155 to 7421 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
185.7 bits(399) | 0.0 | 82/89(92%) | 0/89(0%) | Plus/Plus |
Query 173 EIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFSRL*IGQKP*LH*QLAWALGLCCIF*GGQICLIQGTTSINSLTVGVTETVQKV*LT 439 EIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFS L IGQKP*LH*QLAWAL LCCIF*G QI LIQGTTSINS TVGVT TVQKV*LT Subject 7155 EIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFSSLRIGQKP*LH*QLAWALDLCCIF*GSQIYLIQGTTSINSPTVGVTGTVQKV*LT 7421