Queries
Nucleotide Sequence (951 letters)
Query ID: | ds2016-132_4 |
Query definition: | No definition line |
Query length: | 951 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
709.0 | 3790.6 | 27% | 0 | 88% | KR054734.1 | |
599.0 | 2712.9 | 27% | 3.125e-169 | 61% | KT948710.1 | |
614.6 | 2813.2 | 27% | 6.384e-174 | 63% | KX274274.1 | |
447.4 | 1214.2 | 20% | 1.422e-123 | 36% | KR054735.1 | |
525.7 | 1809.3 | 27% | 3.668e-147 | 43% | AY368172.2 |
Alignments
Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome
Sequence ID: KR054734.1 Length: 8753 Number of Matches: 11
Range 1: 1195 to 2133 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
709.0 bits(1541) | 0.0 | 299/313(96%) | 0/313(0%) | Minus/Plus |
Query 3 SLLMPNISKLVMSFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLIDITPDFFEHLFLFSCLNELIAEDIEEVMDGSWFGLGNLHFNRQRAPYSLGVSHWINSPFSVEHKFAGVINHQILYVALSLVPLSDDPSFKLTSREVDSALSSVRMALGVTGQSKLFGFLVNNTFINEVQRGYKLRLAQHLKSLTWLFHFCGCQWFLLCRRTNLKFLSDRKSSFADLDCGVAKIYSLVSAQAIAPGVLSGLTKVYSFGSNSQQKLISSNVLEGKLCESVQSPNAHFGETLVSHDQEGKVVTSTPHTSQLLDA 941 SLLMPNISKLV+SFLCRMMPNALARLSSSFRETSLDSFV+ALEPFNFSVNLIDITPDFFEHLFLFSCLNELIAEDIEE MDGSWFGLGNLHFNRQRAPYSLGVSHWI SPFSVEHKFAGVIN QILYVALSLVPLSDDPSFKLTSREVDSALSSVR ALGVTGQSKLFGFLVNNT NEVQRGYKLRLAQHLKSLTWLFHFCGCQWFLLCRR NLKFLSDRKSSFAD DCGVAKIYSLV+AQAIAP VLSGLTKVYSFGSNSQQKLISSN+LEG LCESVQSPNAHFGETLVSHDQEGKVVTSTPHTSQLLDA Subject 1195 SLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVHALEPFNFSVNLIDITPDFFEHLFLFSCLNELIAEDIEEAMDGSWFGLGNLHFNRQRAPYSLGVSHWIKSPFSVEHKFAGVINRQILYVALSLVPLSDDPSFKLTSREVDSALSSVRKALGVTGQSKLFGFLVNNTLTNEVQRGYKLRLAQHLKSLTWLFHFCGCQWFLLCRRINLKFLSDRKSSFADPDCGVAKIYSLVTAQAIAPEVLSGLTKVYSFGSNSQQKLISSNILEGNLCESVQSPNAHFGETLVSHDQEGKVVTSTPHTSQLLDA 2133
Range 2: 1194 to 2135 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
656.3 bits(1426) | 0.0 | 286/314(91%) | 0/314(0%) | Minus/Plus |
Query 1 FSIDA*YFKAGNVIFVSNDA*CLSQVVFKFPRNFT*LICLCS*AFQLLC*LDRYYP*LL*ASIFVLLPQ*ADCRGY*GSYGRLMVWTWQFAL*SSEGSIFPRGVTLDQLSILC*AQVCRCH*PPNSVCCSVLGPIVR*SFF*VDF*GS*FRSFKCKNGSWGYRAVKAFWLLSE*HFHK*GAERV*VKACSTLEITDLALSFLWLSMVSSVPKNQPQISK*PKVLLC*P*LWCC*NL*LGFSSGYRPWGFVRLN*GIFFWLQFSTEAHLFECS*RQVV*ISAVPQRTLWRNPS*SRSRGKSCNKYPSHFTIARCK 942 FSIDA*YFKAG++IFVSNDA*CLSQVVFKFPRNFT*LIC CS*AFQL C*LD YYP* L*ASIFVLLPQ*ADCRGY*GSYGRLMVWTWQFAL* SEG IFPRGVTLDQ+SILC*AQVCRCH*PPNSVCCSVLGPIVR*SFF*VDF*GS*FRSFKCK GSWGYRA+KAFWLLSE*H HK*GAERV*VKACSTLEIT LALSFLWLSMVSSV KNQP ISK* KVLLC*P*LWCC*NL* G+SSG+RP GFVRLN*G+FFWLQFSTEAHLF+ S*R V*ISAVPQRTLWRNPS SRSRG+SC+KYPSHFTIARCK Subject 1194 FSIDA*YFKAGDIIFVSNDA*CLSQVVFKFPRNFT*LICSCS*AFQLFC*LD*YYP*FL*ASIFVLLPQ*ADCRGY*GSYGRLMVWTWQFAL*PSEGPIFPRGVTLDQISILC*AQVCRCH*PPNSVCCSVLGPIVR*SFF*VDF*GS*FRSFKCKKGSWGYRAIKAFWLLSE*HSHK*GAERV*VKACSTLEITYLALSFLWLSMVSSVSKNQP*ISK*SKVLLC*P*LWCC*NL*FGYSSGHRP*GFVRLN*GLFFWLQFSTEAHLFKYS*R*FV*ISAVPQRTLWRNPSQSRSRGESCDKYPSHFTIARCK 2135
Range 3: 1192 to 2133 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
632.0 bits(1373) | 0.0 | 283/314(90%) | 0/314(0%) | Plus/Minus |
Query 3 CIEQL*SVRGTCYNFSLLIVTN*GFSKVCVGGLH*FTQLAFKNIRRDELLLRIGAKRIYLS*A*QNPRGDSLS*NQAIDFSNTTIKVSKGGLSVT*KFEVGSSAQKKPLTTTEMKEPSQ*FQVLSKP*LIPSLHLIYESVIH*EAKKL*LPCNPKSHSYT*KSGINFPRSQLKRRII*QWDQGQSNIQNLVVNDTCKLVLNREWRVDPV*HP*GIWSPLTIKVQIAKSKP*AVHNFLNILCNQLIEAGEQK*MLKEVRGNIDQVNREVERLKSIDK*VK*SFAET*RQPG*GIRHHSTQK*HYQL*NIRHQ*RT 944 CIEQL*SVRGTC+NF LLIVT+*GFSKVCVGGLH*FTQ+ FKNI RDELLLRIGAKRI LS*A*QN RGD LS NQ IDFSNTTI+VSKGGLS+T*KF+V SS QKKPLTTTEMKEPS+*FQVLSKP*LIPSLHLI ESVIH*EAKKL*LPCNPKS SYT*KSGINFPRSQLKRRII*QWDQGQSNIQNL VNDTCKLVLNREWR DPV*HP*GIW PLT+KVQIAKSKP*AVH+FLNILCNQLIEAGEQK*MLKE+RGNI+QVNR+VERLKS++K*VK*SFAET*RQPG*GIRHHSTQK*++QL*NIRHQ*RT Subject 1192 CIEQL*SVRGTCHNFPLLIVTD*GFSKVCVGGLH*FTQITFKNI*RDELLLRIGAKRIDLS*A*QNLRGDGLSCNQTIDFSNTTIRVSKGGLSIT*KFKVDSSTQKKPLTTTEMKEPSK*FQVLSKP*LIPSLHLICESVIH*EAKKL*LPCNPKSLSYT*KSGINFPRSQLKRRII*QWDQGQSNIQNLAVNDTCKLVLNREWRFDPV*HP*GIWGPLTVKVQIAKSKP*AVHSFLNILCNQLIEAGEQK*MLKEIRGNINQVNRKVERLKSMNK*VK*SFAET*RQPG*GIRHHSTQK*YHQL*NIRHQ*RT 2133
Range 4: 1373 to 2134 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
531.2 bits(1153) | 0.0 | 235/254(93%) | 0/254(0%) | Plus/Minus |
Query 2 LHRAIVKCEGYLLQLFPLDRD*LGFLQSVRWGTALIHTTCLQEHSKR*ASVENWSQKNIP*LSLTKPQGR*PELKPSYRF*QHHNQGQQRRTFGHLEI*GWFFGTEETIDNHRNERAKSVISSVEQALTYTLSAPHL*KCYSLRSQKALTAL*PQEPFLHLKERNQLP*KST*KKDHLTMGPRTEQHTEFGG**HLQTCAQQRMES*SSVTPLGNMEPSDD*SANCQVQTMSRP*LPQYPLQSAH*GRRTKIDA 763 LHRAIVKCEGYL QL PLDRD*LGFLQSVRWGTALIHT LQE+ KR*ASVENWSQKN P*LSLTKPQGR PEL P+YRF*QHHNQGQQRRTF HLEI*G FF TEETIDNHRNERAK VISSVEQALTYTLSAPHL*+CYSLRSQKAL AL*PQEPFLHLKERNQLP*KST*KKDHLTMGPRTEQHTEFGG**HLQTCAQQRME *SSVTPLGNM PSD *SANCQVQTMSRP*LPQYPLQSAH*GRRTKIDA Subject 1373 LHRAIVKCEGYLSQLSPLDRD*LGFLQSVRWGTALIHTNYLQEYLKR*ASVENWSQKNRP*LSLTKPQGRWPEL*PNYRF*QHHNQGQQRRTFDHLEI*G*FFDTEETIDNHRNERAK*VISSVEQALTYTLSAPHL*ECYSLRSQKALIAL*PQEPFLHLKERNQLP*KST*KKDHLTMGPRTEQHTEFGG**HLQTCAQQRMEI*SSVTPLGNMGPSDG*SANCQVQTMSRP*LPQYPLQSAH*GRRTKIDA 2134
Range 5: 1193 to 1330 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
99.1 bits(210) | 0.0 | 43/46(93%) | 0/46(0%) | Plus/Minus |
Query 806 *KAQEHRQMSQVKFRGNLKTTWLRH*ASFDTKMTLPALKY*ASIEN 943 *KAQEH QMSQVKFRGNLKTTWLRH*ASFDTKM PALKY*ASIEN Subject 1193 *KAQEHEQMSQVKFRGNLKTTWLRH*ASFDTKMISPALKY*ASIEN 1330
Range 6: 1194 to 1805 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
435.0 bits(943) | 0.0 | 198/204(97%) | 0/204(0%) | Plus/Minus |
Query 331 QPQK*KSQVSDFKC*ASLNLYPLCTSFMKVLFTKKPKSFDCPVTPRAILTLERAESTSLEVNLKEGSSDNGTKDRATYRIWWLMTPANLCSTENGELIQCDTPREYGAL*RLKCKLPSPNHEPXXXXXXXXXXXXLRQENKNRCSKKSGVISIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINRE 942 QPQK*KSQVSDFKC*ASLNLYPLCTSF++VLFTKKPKSFDCPVTPRA LTLERAESTSLEVNLKEGSSDNGTKDRATYRIW LMTPANLCSTENG+LIQCDTPREYGAL*RLKCKLPSPNHEPSI SSISSAISSLRQENKNRCSKKSGVISIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINRE Subject 1194 QPQK*KSQVSDFKC*ASLNLYPLCTSFVRVLFTKKPKSFDCPVTPRAFLTLERAESTSLEVNLKEGSSDNGTKDRATYRIWRLMTPANLCSTENGDLIQCDTPREYGAL*RLKCKLPSPNHEPSIASSISSAISSLRQENKNRCSKKSGVISIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINRE 1805
Range 7: 1857 to 2135 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
189.8 bits(408) | 0.0 | 86/93(92%) | 0/93(0%) | Plus/Minus |
Query 1 LASSNCEV*GVLVTTFPS*S*LTRVSPKCALGDCTDSHNLPSRTFEEMSFC*ELEPKEYTLVKPDKTPGAIA*AETKL*ILATPQSRSAKEDF 279 LASSNCEV*GVLVTTFPS*S*LTRVSPKCALGDCTDSH LPSR FEEMSFC*ELEPKE TLVKPDKT GA+A*A TKL*ILATPQS SAKEDF Subject 1857 LASSNCEV*GVLVTTFPS*S*LTRVSPKCALGDCTDSHKLPSRIFEEMSFC*ELEPKE*TLVKPDKTSGAMA*AVTKL*ILATPQSGSAKEDF 2135
Range 8: 1649 to 2134 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
309.9 bits(670) | 0.0 | 143/162(88%) | 0/162(0%) | Minus/Plus |
Query 2 FQV*EWLLGLQGSQSFLAS**ITLS*MRCREGIS*GLLNT*NH*LGSFISVVVNGFFCAEEPTSNF*VTESPPLLTLIVVLLKSIAWFQLRLSPLGFCQA*LRYILLAPILNRSSSLRMFLKASCVNQCSPPTHTLEKP*LVTIKREKL*QVPLTLHNCSMQ 487 FQV*E LLGLQG+QSFLAS**ITLS MRCREGIS*GLLNT*NH LGSFISVVVNGFFC EE T NF*V ESPPLLTLIVVLLKSI W QLR SPL FCQA*LR ILLAPILNRSSSL++FLK CVNQCSPPTHTLEKP* VTIKR KL*QVPLTLHNCSMQ Subject 1649 FQV*ERLLGLQGNQSFLAS**ITLSQMRCREGIS*GLLNT*NHLLGSFISVVVNGFFCVEESTLNF*VIESPPLLTLIVVLLKSIVWLQLRPSPLRFCQA*LRSILLAPILNRSSSLQIFLKVICVNQCSPPTHTLEKP*SVTIKRGKL*QVPLTLHNCSMQ 2134
Range 9: 1376 to 1507 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
103.2 bits(219) | 0.0 | 42/44(95%) | 0/44(0%) | Minus/Plus |
Query 629 IYFCSPASMS*LQRILRKLWTAHGLDLAICTLIVRGLHIP*GCH 760 IYFCSPASMS*LQRILRKLWTAHGLDLAICTL VRG HIP*GCH Subject 1376 IYFCSPASMS*LQRILRKLWTAHGLDLAICTLTVRGPHIP*GCH 1507
Grapevine rupestris stem pitting associated virus isolate VF1, partial genome
Sequence ID: KT948710.1 Length: 8716 Number of Matches: 11
Range 1: 1196 to 2125 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
599.0 bits(1301) | 0.0 | 255/310(82%) | 0/310(0%) | Minus/Plus |
Query 12 SLLMPNISKLVMSFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLIDITPDFFEHLFLFSCLNELIAEDIEEVMDGSWFGLGNLHFNRQRAPYSLGVSHWINSPFSVEHKFAGVINHQILYVALSLVPLSDDPSFKLTSREVDSALSSVRMALGVTGQSKLFGFLVNNTFINEVQRGYKLRLAQHLKSLTWLFHFCGCQWFLLCRRTNLKFLSDRKSSFADLDCGVAKIYSLVSAQAIAPGVLSGLTKVYSFGSNSQQKLISSNVLEGKLCESVQSPNAHFGETLVSHDQEGKVVTSTPHTSQL 941 SLLMPNISKLV+SFLCRMMPN LARLSSSFRETSLDSFVYALEPFNFSVNLID+TPDFFEHLFLFSC NELI EDIEEVMD SWFGLGN++FNRQRAPYSLGVSHW+NSPFSVE KFAG INHQIL+VAL+LVPL +DPSFKL REVDS LSSVRMALG+TGQS+LFGFLVN+T INE+QR YKLRLAQHLKSLTW FHFCGCQWFLL RR NLKFL DRKSSFADLDC V +IY LVSAQA APGVL GLTKVY SN+QQ+L S N LEGK ESVQ +A FGETLVS+DQE V TST H QL Subject 1196 SLLMPNISKLVISFLCRMMPNVLARLSSSFRETSLDSFVYALEPFNFSVNLIDVTPDFFEHLFLFSCRNELIEEDIEEVMDSSWFGLGNVYFNRQRAPYSLGVSHWLNSPFSVESKFAGAINHQILHVALALVPLPNDPSFKLAPREVDSVLSSVRMALGITGQSRLFGFLVNDTLINELQRRYKLRLAQHLKSLTWYFHFCGCQWFLLNRRNNLKFLGDRKSSFADLDCNVTQIYRLVSAQATAPGVLLGLTKVYVCCSNTQQRLNSLNALEGKSSESVQPSDACFGETLVSNDQERDVETSTSHVPQL 2125
Range 2: 1195 to 1806 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
365.3 bits(791) | 0.0 | 172/204(84%) | 0/204(0%) | Plus/Minus |
Query 331 QPQK*KSQVSDFKC*ASLNLYPLCTSFMKVLFTKKPKSFDCPVTPRAILTLERAESTSLEVNLKEGSSDNGTKDRATYRIWWLMTPANLCSTENGELIQCDTPREYGAL*RLKCKLPSPNHEPXXXXXXXXXXXXLRQENKNRCSKKSGVISIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINRE 942 QPQK*K QVSDFKC ASLNLY LC SFM+V FTKKPKS DCPV PRAILTLER ESTSL +LKEGS GTK RAT +IWWLM PANL STENGEL QCDTP EYGAL*RLK LPSPNHE SITSS+SS+ISSLRQENKNRCSKKSGV SIKLTEKLKGSRA*TNESSEVSRKLED+LA+ LGIIRHKNDITSFE+LGINRE Subject 1195 QPQK*KYQVSDFKCCASLNLYLLCNSFMRVSFTKKPKSLDCPVIPRAILTLERTESTSLGASLKEGSFGKGTKARATCKIWWLMAPANLLSTENGELSQCDTPSEYGAL*RLKYTLPSPNHELSITSSMSSSISSLRQENKNRCSKKSGVTSIKLTEKLKGSRA*TNESSEVSRKLEDSLARTLGIIRHKNDITSFEMLGINRE 1806
Range 3: 1858 to 2124 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
117.9 bits(251) | 0.0 | 59/89(66%) | 0/89(0%) | Plus/Minus |
Query 13 NCEV*GVLVTTFPS*S*LTRVSPKCALGDCTDSHNLPSRTFEEMSFC*ELEPKEYTLVKPDKTPGAIA*AETKL*ILATPQSRSAKEDF 279 NC * VLV+T S S LTRVSPK A CTDS +LPSR F+E+S C* LE + TLVKP+KTPGA+A*AET+ *I T QSRSAKEDF Subject 1858 NCGT*EVLVSTSLSWSLLTRVSPKHASEGCTDSLDLPSRAFKELSLC*VLEQQT*TLVKPNKTPGAVA*AETRR*IWVTLQSRSAKEDF 2124
Range 4: 1193 to 2131 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
454.7 bits(986) | 0.0 | 212/313(68%) | 0/313(0%) | Plus/Minus |
Query 6 IEQL*SVRGTCYNFSLLIVTN*GFSKVCVGGLH*FTQLAFKNIRRDELLLRIGAKRIYLS*A*QNPRGDSLS*NQAIDFSNTTIKVSKGGLSVT*KFEVGSSAQKKPLTTTEMKEPSQ*FQVLSKP*LIPSLHLIYESVIH*EAKKL*LPCNPKSHSYT*KSGINFPRSQLKRRII*QWDQGQSNIQNLVVNDTCKLVLNREWRVDPV*HP*GIWSPLTIKVQIAKSKP*AVHNFLNILCNQLIEAGEQK*MLKEVRGNIDQVNREVERLKSIDK*VK*SFAET*RQPG*GIRHHSTQK*HYQL*NIRHQ*RT 944 I QL ++RGTC+N LL++ N* SK C+ GLH*FT LAFK+++ + LL +GA I LS* N RG LS*NQ I+ N IKVSKGGLS+ KFEV SS Q+KPL TTEMK PS+*FQVL K LIPSL LIYE VIH*+AKK LPC+PKSHS+ *K+GINFPR L+ RII Q DQGQSN+QNLVV+ TCKL LNREWRV P+*+P* IWSPLT+KV IA SKP* +H LN+L NQLI AGEQK*+LKE+RG+I QVN E+ER KSIDK*+K*SF ET*RQPG* I HHSTQK*++QL*N+ HQ* T Subject 1193 IRQLWNMRGTCFNIPLLVIAN*SLSKACI*GLH*FT*LAFKSVQGVKSLLSVGATNIDLS*TQ*NSRGCGLS*NQTINLGNIAIKVSKGGLSIAQKFEVVSSVQEKPLATTEMKIPSE*FQVLCKSQLIPSLQLIYEGVIH*KAKKPRLPCDPKSHSHA*KNGINFPRG*LEGRIIWQRDQGQSNMQNLVVDGTCKLALNREWRVKPM*YP**IWSPLTVKVHIA*SKP*TIHYLLNVLLNQLIAAGEQK*VLKEIRGHIYQVN*EIERFKSIDK*IK*SFTET*RQPG*DIGHHSTQK*YHQL*NVGHQ*GT 2131
Range 5: 1195 to 2136 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
407.5 bits(883) | 0.0 | 202/314(64%) | 0/314(0%) | Minus/Plus |
Query 1 FSIDA*YFKAGNVIFVSNDA*CLSQVVFKFPRNFT*LICLCS*AFQLLC*LDRYYP*LL*ASIFVLLPQ*ADCRGY*GSYGRLMVWTWQFAL*SSEGSIFPRGVTLDQLSILC*AQVCRCH*PPNSVCCSVLGPIVR*SFF*VDF*GS*FRSFKCKNGSWGYRAVKAFWLLSE*HFHK*GAERV*VKACSTLEITDLALSFLWLSMVSSVPKNQPQISK*PKVLLC*P*LWCC*NL*LGFSSGYRPWGFVRLN*GIFFWLQFSTEAHLFECS*RQVV*ISAVPQRTLWRNPS*SRSRGKSCNKYPSHFTIARCK 942 F IDA +FKAG++IFVSNDA C SQ VFKFP NFT* ICLCS* FQ L *LDR P* L*A IFVLLPQ*AD G+*G G MVWT Q L* SEGSIF RG+TL LSILC* QVCRCH PPN CCS LGP +*SF *GS*FRSFK +NGSW +RA+ AFWL SE*H HK* AE+V*V+ C+ LEIT L SFLWL +VS PK QPQI KVLLC*P*L C NL GFSSG+ PW F+ N*G+ LQ ST+ L E S*RQV *ISA + LWR+ S* R NKY S T+A CK Subject 1195 FPIDAQHFKAGDIIFVSNDAQCPSQAVFKFP*NFT*FICLCS*TFQFLS*LDRCDP*FL*APIFVLLPQ*AD*GGH*GGNG*FMVWTRQCVL*PSEGSIFTRGITLA*LSILC*EQVCRCHQPPNFACCSGLGPFAK*SFLQASP*GS*FRSFKRENGSWDHRAI*AFWLFSE*HPHK*VAEKV*VETCTALEITHLVFSFLWLPVVSLEPKKQPQIFGRSKVLLC*P*LQCYPNLSSGFSSGHSPWSFIGFN*GLCLLLQHSTKT*LLERS*RQVK*ISAALRCMLWRDSS*Q*PREGC*NKYLSCSTVA*CK 2136
Range 6: 1374 to 2135 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
323.2 bits(699) | 0.0 | 160/254(63%) | 0/254(0%) | Plus/Minus |
Query 2 LHRAIVKCEGYLLQLFPLDRD*LGFLQSVRWGTALIHTTCLQEHSKR*ASVENWSQKNIP*LSLTKPQGR*PELKPSYRF*QHHNQGQQRRTFGHLEI*GWFFGTEETIDNHRNERAKSVISSVEQALTYTLSAPHL*KCYSLRSQKALTAL*PQEPFLHLKERNQLP*KST*KKDHLTMGPRTEQHTEFGG**HLQTCAQQRMES*SSVTPLGNMEPSDD*SANCQVQTMSRP*LPQYPLQSAH*GRRTKIDA 763 LH A V+ E YL Q L *L LQS+ ALIH TCLQE S+ * VE WS K+ P*L+ K QG PELKP +F H NQGQQRRTF +I*G FFG+ ET NHRNE K VISS Q TYT SA HL* C+SL+SQKA AL* QEPF LKERNQLP* *+KDHL GPR EQH +FGG* HLQTC+QQRMES*++V PL NMEPSD *S +C VQTM+ P PQ P QSAH GRRTKI A Subject 1374 LH*ATVEHERYLFQHPSLGHC*LESLQSMHLRAALIHLTCLQERSRS*VFVECWSNKHRP*LNPIKLQGLWPELKPDDKFG*HCNQGQQRRTFDRPKI*GCFFGSRETTGNHRNENTK*VISSAVQVSTYTFSATHL*GCHSLKSQKA*IAL*SQEPFSRLKERNQLP*GLA*RKDHLAKGPRPEQHAKFGG*WHLQTCSQQRMES*ANVIPLVNMEPSDG*STHCLVQTMNYPLPPQCPPQSAHCGRRTKIGA 2135
Range 7: 1194 to 1331 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.5 bits(165) | 0.0 | 35/46(76%) | 0/46(0%) | Plus/Minus |
Query 806 *KAQEHRQMSQVKFRGNLKTTWLRH*ASFDTKMTLPALKY*ASIEN 943 *K QEHRQM+QVKF GNLKT WL H ASFDTKM PALK ASI N Subject 1194 *KVQEHRQMNQVKFHGNLKTAWLGHWASFDTKMISPALKCWASIGN 1331
Range 8: 1650 to 2132 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.0 bits(417) | 0.0 | 98/161(61%) | 0/161(0%) | Minus/Plus |
Query 5 FQV*EWLLGLQGSQSFLAS**ITLS*MRCREGIS*GLLNT*NH*LGSFISVVVNGFFCAEEPTSNF*VTESPPLLTLIVVLLKSIAWFQLRLSPLGFCQA*LRYILLAPILNRSSSLRMFLKASCVNQCSPPTHTLEKP*LVTIKREKL*QVPLTLHNCSM 487 FQ *EWLLG QG+ FLA **+T S*M CREGIS* L +T*NH LG FISVV +GF EE TSNF ESPPLLTLI +L K I WFQLR PL F *LR + +AP LN+ + LKAS VNQCSP H LE+ *L KR L QVPL H+C M Subject 1650 FQA*EWLLGSQGNLGFLAF**MTPS*MSCREGIS*DLHST*NHSLGIFISVVASGFS*TEETTSNFWAIESPPLLTLIAMLPKFIVWFQLRPQPLEFYWV*LRSMFVAPTLNKDLTP*TLLKASQVNQCSPQMHALERL*LAMTKRGMLKQVPLMFHSCLM 2132
Range 9: 1380 to 1508 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
75.3 bits(158) | 0.0 | 31/43(72%) | 0/43(0%) | Minus/Plus |
Query 629 YFCSPASMS*LQRILRKLWTAHGLDLAICTLIVRGLHIP*GCH 757 YFCSPA+MS*L+R LR+ W HGLD A+CTL VRGLHI *G H Subject 1380 YFCSPAAMS*LRRTLRR*WIVHGLD*AMCTLTVRGLHIH*GYH 1508
Grapevine rupestris stem pitting associated virus isolate SK704 A, complete genome
Sequence ID: KX274274.1 Length: 8725 Number of Matches: 11
Range 1: 1195 to 2130 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
614.6 bits(1335) | 0.0 | 259/312(83%) | 0/312(0%) | Minus/Plus |
Query 6 SLLMPNISKLVMSFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLIDITPDFFEHLFLFSCLNELIAEDIEEVMDGSWFGLGNLHFNRQRAPYSLGVSHWINSPFSVEHKFAGVINHQILYVALSLVPLSDDPSFKLTSREVDSALSSVRMALGVTGQSKLFGFLVNNTFINEVQRGYKLRLAQHLKSLTWLFHFCGCQWFLLCRRTNLKFLSDRKSSFADLDCGVAKIYSLVSAQAIAPGVLSGLTKVYSFGSNSQQKLISSNVLEGKLCESVQSPNAHFGETLVSHDQEGKVVTSTPHTSQLLD 941 SLLMPNISKLV+SFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLID+TPDFFEHLFLFSCLNELI EDIEEVMD SWFGLGN+HFNRQRAPYSLG+SHW+NSPFSVEHKFAG INHQIL+VALSLVPLS+DP FKLT REVDSALSSVRMALG+TGQSKLFGFLVN+T INE+QR YKLRLA+HLKSLTW FHFCGCQWFLL RR NLKFL DRKSSFADLDC VA+IY LVSAQ APGVL GLTKVY+ SN QQ+L S NVLEGK C++VQ + + GET VSH QEG V TS H QL D Subject 1195 SLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGNVHFNRQRAPYSLGISHWLNSPFSVEHKFAGAINHQILHVALSLVPLSNDPFFKLTPREVDSALSSVRMALGITGQSKLFGFLVNDTLINEMQRRYKLRLAKHLKSLTWYFHFCGCQWFLLNRRVNLKFLGDRKSSFADLDCNVAQIYRLVSAQVTAPGVLLGLTKVYAHYSNPQQQLNSLNVLEGKSCKTVQPSDTYSGETPVSHGQEGNVETSISHAPQLPD 2130
Range 2: 1194 to 1805 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
383.7 bits(831) | 0.0 | 180/204(88%) | 0/204(0%) | Plus/Minus |
Query 331 QPQK*KSQVSDFKC*ASLNLYPLCTSFMKVLFTKKPKSFDCPVTPRAILTLERAESTSLEVNLKEGSSDNGTKDRATYRIWWLMTPANLCSTENGELIQCDTPREYGAL*RLKCKLPSPNHEPXXXXXXXXXXXXLRQENKNRCSKKSGVISIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINRE 942 QPQK K QVSDFKC ASLNLY LC S M+V FTKKPKS DCPV PRAILTLERAESTSL V+LK+GS D GTKDRAT RIWWLM PANLCSTENGEL QCD P EYGAL*RLKC LPSPNHE SITSSISS+ISSLRQENKNRCSKKSGV SIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINRE Subject 1194 QPQKWKYQVSDFKCLASLNLYLLCISLMRVSFTKKPKSLDCPVIPRAILTLERAESTSLGVSLKKGSFDKGTKDRATCRIWWLMAPANLCSTENGELSQCDIPSEYGAL*RLKCTLPSPNHELSITSSISSSISSLRQENKNRCSKKSGVTSIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINRE 1805
Range 3: 1857 to 2135 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
116.5 bits(248) | 0.0 | 59/93(63%) | 0/93(0%) | Plus/Minus |
Query 1 LASSNCEV*GVLVTTFPS*S*LTRVSPKCALGDCTDSHNLPSRTFEEMSFC*ELEPKEYTLVKPDKTPGAIA*AETKL*ILATPQSRSAKEDF 279 L S NC * +LV+TFPS LT VSP+ CT H+LPSRTF+E+S C* LE TLVKP+KTPGA+ *AETK *I AT QSRSAKEDF Subject 1857 LRSGNCGA*EILVSTFPSWPWLTGVSPEYVSEGCTVLHDLPSRTFKELSCC*GLE**A*TLVKPNKTPGAVT*AETKR*I*ATLQSRSAKEDF 2135
Range 4: 1192 to 2130 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
472.6 bits(1025) | 0.0 | 223/313(71%) | 0/313(0%) | Plus/Minus |
Query 6 IEQL*SVRGTCYNFSLLIVTN*GFSKVCVGGLH*FTQLAFKNIRRDELLLRIGAKRIYLS*A*QNPRGDSLS*NQAIDFSNTTIKVSKGGLSVT*KFEVGSSAQKKPLTTTEMKEPSQ*FQVLSKP*LIPSLHLIYESVIH*EAKKL*LPCNPKSHSYT*KSGINFPRSQLKRRII*QWDQGQSNIQNLVVNDTCKLVLNREWRVDPV*HP*GIWSPLTIKVQIAKSKP*AVHNFLNILCNQLIEAGEQK*MLKEVRGNIDQVNREVERLKSIDK*VK*SFAET*RQPG*GIRHHSTQK*HYQL*NIRHQ*RT 944 I QL S+R TC N SLL + N G S+VCVGGLH FT LAF+NI ELLLR+G I L A Q+ RG LS*NQ I+ SN TIKVSKGGLS+ KFEV SS Q+KPLTTT+M+ PS+*FQVL K LIPSLH I E +IH*+AKK LPC+PKSHSYT*KS INFPRS LK+RII*Q DQGQSN+QNLVV+ TCKL+LNREW V PV*+P* IWSPLT+KV IAKSKP* +HN LNIL NQLIEAGE K*+LKE+RG+I QVNR++ER KS+DK*VK*SFAET*R G GIRHH TQK*++QL*NI HQ* T Subject 1192 IGQLWSMRDTCLNISLLAMANWGLSRVCVGGLHGFT*LAFQNI*GVELLLRVGVMSIDLGQAQQDSRGCDLS*NQTINLSNITIKVSKGGLSIAKKFEVNSSIQEKPLTTTKMEIPSK*FQVLGKSQLIPSLHFINEGIIH*KAKKFRLPCDPKSHSYT*KSRINFPRS*LKKRII*QRDQGQSNMQNLVVDGTCKLMLNREWGVKPV*YP**IWSPLTVKVHIAKSKP*TIHNLLNILFNQLIEAGE*K*VLKEIRGHIYQVNRKIERFKSVDK*VK*SFAET*R*SGQGIRHHPTQK*YHQL*NIGHQ*GT 2130
Range 5: 1194 to 2129 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
429.0 bits(930) | 0.0 | 205/312(66%) | 0/312(0%) | Minus/Plus |
Query 7 FSIDA*YFKAGNVIFVSNDA*CLSQVVFKFPRNFT*LICLCS*AFQLLC*LDRYYP*LL*ASIFVLLPQ*ADCRGY*GSYGRLMVWTWQFAL*SSEGSIFPRGVTLDQLSILC*AQVCRCH*PPNSVCCSVLGPIVR*SFF*VDF*GS*FRSFKCKNGSWGYRAVKAFWLLSE*HFHK*GAERV*VKACSTLEITDLALSFLWLSMVSSVPKNQPQISK*PKVLLC*P*LWCC*NL*LGFSSGYRPWGFVRLN*GIFFWLQFSTEAHLFECS*RQVV*ISAVPQRTLWRNPS*SRSRGKSCNKYPSHFTIAR 942 F IDA YFKAG++IFVS+DA*CL Q++FKFPRNFT*LICL S* FQ *LDR P* L*A IF+LLPQ*AD RGY*G YG MVWTWQ AL* SEGSIF R +TL L ILC*A VCRCH PPNS CCSVLGP V+*SFF* + *GS*F SFKCKNGSW +RA+ FWL SE*+ H * AE+V*V+ C LEIT L FLWLSMVS K+ PQIS KVLLC*P*L CC NL GFSSG+ PW V L+ G+ LQ ST L +CS RQV+* A + LWR+PS* RGK +KY S T+AR Subject 1194 FPIDAQYFKAGDIIFVSDDA*CLGQIIFKFPRNFT*LICLRS*TFQFFG*LDRCDP*FL*APIFILLPQ*AD*RGY*GGYG*FMVWTWQCAL*PSEGSIFTRDITLA*LPILC*A*VCRCHQPPNSACCSVLGPFVK*SFF*ANS*GS*FCSFKCKNGSWDHRAI*TFWLFSE*YPH**NAEKV*VETCQALEITYLVFPFLWLSMVSLESKS*PQISWRSKVLLC*P*L*CCSNLSFGFSSGHSPWSLVGLDQGLCSLLQPSTTTQLLKCSGRQVM*NRAALRHILWRDPS*PWPRGKC*DKYLSCSTVAR 2129
Range 6: 1373 to 2128 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
332.4 bits(719) | 0.0 | 163/252(65%) | 0/252(0%) | Plus/Minus |
Query 8 RAIVKCEGYLLQLFPLDRD*LGFLQSVRWGTALIHTTCLQEHSKR*ASVENWSQKNIP*LSLTKPQGR*PELKPSYRF*QHHNQGQQRRTFGHLEI*GWFFGTEETIDNHRNERAKSVISSVEQALTYTLSAPHL*KCYSLRSQKALTAL*PQEPFLHLKERNQLP*KST*KKDHLTMGPRTEQHTEFGG**HLQTCAQQRMES*SSVTPLGNMEPSDD*SANCQVQTMSRP*LPQYPLQSAH*GRRTKIDA 763 RA V+ E YL Q FPL *LG LQS+ A + TCL EH + * VE WS ++ P S T+ QG *PELKP+ +F QH+NQGQQRRTF EI*G F + ETIDNH+N K VISS Q TYT SA H * +SL+SQK AL* QEPFLHLKE+NQLP*+ *KKDHLT GPRTEQH EFGG* HLQT AQQRM S*+SV L NMEPSD *SA+CQVQTM+ P* PQYPLQSAH*GRR KI A Subject 1373 RATVEHERYLSQHFPLGHG*LGSLQSMCRRAARFYMTCLPEHLRS*VVVEGWSNEHRPWSSPTRLQGL*PELKPNDKFEQHYNQGQQRRTFDRQEI*G*LFDSRETIDNHKNGNTK*VISSAWQVSTYTFSAFH**GYHSLKSQKV*IAL*SQEPFLHLKEQNQLP*ELA*KKDHLTKGPRTEQHAEFGG*WHLQTYAQQRMGS*ASVISLVNMEPSDG*SAHCQVQTMNYP*PPQYPLQSAH*GRRIKIGA 2128
Range 7: 1193 to 1330 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.0 bits(164) | 0.0 | 36/46(78%) | 0/46(0%) | Plus/Minus |
Query 806 *KAQEHRQMSQVKFRGNLKTTWLRH*ASFDTKMTLPALKY*ASIEN 943 *K QE RQMSQVKFRGNLK W RH*AS DTKM PALKY ASI N Subject 1193 *KVQERRQMSQVKFRGNLKIIWPRH*ASSDTKMISPALKYWASIGN 1330
Range 8: 1649 to 2125 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
205.4 bits(442) | 0.0 | 102/159(64%) | 0/159(0%) | Minus/Plus |
Query 11 FQV*EWLLGLQGSQSFLAS**ITLS*MRCREGIS*GLLNT*NH*LGSFISVVVNGFFCAEEPTSNF*VTESPPLLTLIVVLLKSIAWFQLRLSPLGFCQA*LRYILLAPILNRSSSLRMFLKASCVNQCSPPTHTLEKP*LVTIKREKL*QVPLTLHNC 487 FQV*EWLLG QG+ +FLA **+ S M+CREGIS* L +T*NH LG I VVVNGF EE TSNF ESPPLLTLIV+LLK I WFQLR PL C A* R +L+ P LN +S+ MF KAS V CSPPTHTLE+P L KRE L QV L LH+C Subject 1649 FQV*EWLLGSQGNLNFLAF**MIPSLMKCREGIS*DLPST*NHLLGISIFVVVNGFS*IEELTSNFLAIESPPLLTLIVMLLKFIVWFQLRSQPLESCWA*PRSMLITPTLNNNSTP*MFWKASHVKPCSPPTHTLERPQLAMAKREMLRQVSLMLHSC 2125
Range 9: 1379 to 1507 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
81.3 bits(171) | 0.0 | 34/43(79%) | 0/43(0%) | Minus/Plus |
Query 629 YFCSPASMS*LQRILRKLWTAHGLDLAICTLIVRGLHIP*GCH 757 YF SPASMS*L+RILR+LW HGLDLA+CTL VRGLHI *G H Subject 1379 YFYSPASMS*LKRILRRLWIVHGLDLAMCTLTVRGLHIH*GYH 1507
Grapevine rupestris stem pitting associated virus isolate GRSPaV LSL, complete genome
Sequence ID: KR054735.1 Length: 8754 Number of Matches: 12
Range 1: 1195 to 2130 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
447.4 bits(970) | 0.0 | 185/312(59%) | 0/312(0%) | Minus/Plus |
Query 6 SLLMPNISKLVMSFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLIDITPDFFEHLFLFSCLNELIAEDIEEVMDGSWFGLGNLHFNRQRAPYSLGVSHWINSPFSVEHKFAGVINHQILYVALSLVPLSDDPSFKLTSREVDSALSSVRMALGVTGQSKLFGFLVNNTFINEVQRGYKLRLAQHLKSLTWLFHFCGCQWFLLCRRTNLKFLSDRKSSFADLDCGVAKIYSLVSAQAIAPGVLSGLTKVYSFGSNSQQKLISSNVLEGKLCESVQSPNAHFGETLVSHDQEGKVVTSTPHTSQLLD 941 SL+MPNI KL++SFLCRMMPN LARLSSSFRE+SLDSFVY+LEPFNFS+NL+DIT +FFEH+FLFSC NELI E++EEVMD SWFGLGN HFNR++ P+S G W+NS FSVEHKF G++N+QIL+ LSL+PL +DP FK + RE+DSALS V+ AL +TGQSKLF F+V++T + VQ Y+ RL+ H+K+LT FH CG QWFLLCRR NL+FL DRKSSFADL C VAKIY+LV AQ P SGL +VY S S + G+ +S+++ N G + D+ K T H S L+ Subject 1195 SLIMPNIHKLIISFLCRMMPNVLARLSSSFRESSLDSFVYSLEPFNFSINLVDITAEFFEHMFLFSCRNELIEENVEEVMDNSWFGLGNAHFNRRQNPFSFGRDFWLNSKFSVEHKFPGIVNNQILHAVLSLIPLPNDPKFKPSGREIDSALSRVKAALAITGQSKLFRFVVDDTLLRSVQSAYRFRLSSHIKALTEFFHICGLQWFLLCRRANLRFLCDRKSSFADLSCQVAKIYNLVVAQVTLPNASSGLIQVYIDHSRSNKNSNPHFAATGEARDSIEAVNLDSGVPPLCDDKVIKATTVALHASPKLN 2130
Range 2: 1194 to 1805 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
201.8 bits(434) | 0.0 | 111/204(54%) | 0/204(0%) | Plus/Minus |
Query 331 QPQK*KSQVSDFKC*ASLNLYPLCTSFMKVLFTKKPKSFDCPVTPRAILTLERAESTSLEVNLKEGSSDNGTKDRATYRIWWLMTPANLCSTENGELIQCDTPREYGAL*RLKCKLPSPNHEPXXXXXXXXXXXXLRQENKNRCSKKSGVISIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINRE 942 +PQ K+ V F C SL Y LCT +V T KS DCPV +A LT + AES SL L GS NG D I L P NLCSTEN EL Q P+E G RLKC LPSPN E SITSS S+I+SLRQEN+N CSK S V+S KL EKLKGSR TNES+E S KLED+LA+ GII +N+I S +LGI +E Subject 1194 RPQMWKNSVRAFMCEESLKRYALCTLRRRVSSTTNLKSLDCPVIAKAALTRDSAESISLPEGLNLGSLGNGINDNTACSI*LLTIPGNLCSTENLELSQKSLPKENGFCRRLKCALPSPNQELSITSSTFSSINSLRQENRNICSKNSAVMSTKLIEKLKGSREYTNESNEDSLKLEDSLARTFGIILQRNEIMSL*MLGIIKE 1805
Range 3: 1796 to 1924 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.7 bits(113) | 0.0 | 22/43(51%) | 0/43(0%) | Plus/Minus |
Query 212 *PELKPSYRF*QHHNQGQQRRTFGHLEI*GWFFGTEETIDNHR 340 *P L+PSY+ +G+QRRTFGH E * W G EET ++H+ Subject 1796 *PVLQPSYKSSPPDRKGRQRRTFGHTET*DWLSGREETTEDHK 1924
Range 4: 1510 to 1989 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
110.6 bits(235) | 0.0 | 65/160(41%) | 0/160(0%) | Plus/Minus |
Query 147 LLLRIGAKRIYLS*A*QNPRGDSLS*NQAIDFSNTTIKVSKGGLSVT*KFEVGSSAQKKPLTTTEMKEPSQ*FQVLSKP*LIPSLHLIYESVIH*EAKKL*LPCNPKSHSYT*KSGINFPRSQLKRRII*QWDQGQSNIQNLVVNDTCKLVLNREWRVDP 626 +L+R G + L+ * R +L NQ I+ + T KV KGGLSVT K E+GS A+KKPL TT +++ S+ V +P I +LH + VIH + +KL L CN +S + I F +LK RII WDQ Q +Q L+V++T K + N + V+P Subject 1510 ILVRAGVINVNLNQT**CIR*CNLCYNQVINLRHLTGKVGKGGLSVTQKPEIGSPAEKKPLKTTNVEKFSEGLYV*GEPKTICTLHATQKGVIHHKPEKLGLSCNCQSRLNARQC*IYFSAGRLKFRIIR*WDQ*QHRMQYLIVDNTWKFMFNGKLGVEP 1989
Range 5: 1192 to 1488 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
87.7 bits(185) | 0.0 | 46/99(46%) | 0/99(0%) | Plus/Minus |
Query 648 WSPLTIKVQIAKSKP*AVHNFLNILCNQLIEAGEQK*MLKEVRGNIDQVNREVERLKSIDK*VK*SFAET*RQPG*GIRHHSTQK*HYQL*NIRHQ*RT 944 W I+++I KP VH F N+L + LI AG+Q+ M K++ N++ +N +VERLK I K V * F ET*R PG I HHST++* +L N+ H RT Subject 1192 WVLSAIEMRIT*PKPRIVHYFFNVLLD*LIAAGKQEHMFKKLSRNVN*IN*KVERLKGIHKRV**RFPET*R*PGQNIWHHSTEE*DNELVNVGHYQRT 1488
Range 6: 1194 to 1610 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
62.9 bits(131) | 0.0 | 50/139(36%) | 0/139(0%) | Minus/Plus |
Query 526 FSIDA*YFKAGNVIFVSNDA*CLSQVVFKFPRNFT*LICLCS*AFQLLC*LDRYYP*LL*ASIFVLLPQ*ADCRGY*GSYGRLMVWTWQFAL*SSEGSIFPRGVTLDQLSILC*AQVCRCH*PPNSVCCSVLGPIVR*S 942 F +A + +A +I + NDA C Q +FKF F L+C+ *AFQL * +Y *+ * + V LPQ* + * S G+ +VW A S IF L QL + * + R N+ C V+ PI *S Subject 1194 FFDNAQHSQAHYLIPL*NDAKCSGQAIFKFQGIFIRLVCVFP*AFQLFN*FS*HYG*VF*TYVPVFLPQ*VNRGER*RSNGQFLVWAR*CAFQSPTKPIFFWKRFLAQLQVFR*T*ISRYCQQSNTACGVVIDPIT**S 1610
Range 7: 1676 to 1987 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
61.1 bits(127) | 0.0 | 42/104(40%) | 0/104(0%) | Minus/Plus |
Query 149 LQGSQSFLAS**ITLS*MRCREGIS*GLLNT*NH*LGSFISVVVNGFFCAEEPTSNF*VTESPPLLTLIVVLLKSIAWFQLRLSPLGFCQA*LRYILLAPILNR 460 LQ + SF +T + CR I G +T* L VV +GFF A EP S F VTESPPL T V + I W RL L Q * ++ L+ P L R Subject 1676 LQDNPSFSGLWWMTPFCVACRVHIVLGSPHT*RPSLNFSTFVVFSGFFSAGEPISGFCVTESPPLPTFPVRWRRFITWL*HRLHYLMHHQV*FKFTLITPALTR 1987
Range 8: 1797 to 1925 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.3 bits(110) | 0.0 | 26/43(60%) | 0/43(0%) | Minus/Plus |
Query 211 LWLSMVSSVPKNQPQISK*PKVLLC*P*LWCC*NL*LGFSSGY 339 LW S+VSS+P++Q Q+S *PKVLLC P L +L*LG S+GY Subject 1797 LWSSVVSSLPESQSQVSV*PKVLLCRPFLSGGEDL*LGCSTGY 1925
Range 9: 1385 to 1450 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
30.9 bits(61) | 0.0 | 13/22(59%) | 0/22(0%) | Minus/Plus |
Query 686 CSPASMS*LQRILRKLWTAHGL 751 C PA+MS* +R L+K WT GL Subject 1385 CFPAAMS*SRRTLKK*WTILGL 1450
Range 10: 1193 to 1285 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
29.5 bits(58) | 0.0 | 18/31(58%) | 0/31(0%) | Minus/Plus |
Query 851 VLY*CLIFQSW*CHFCVE*CLMP*PGCLQVS 943 VL *C F S H VE*C M PG LQVS Subject 1193 VL**CPTFTSSLSHSSVE*CQMFWPGYLQVS 1285
Range 11: 1857 to 2060 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
44.6 bits(91) | 0.0 | 28/68(41%) | 0/68(0%) | Plus/Minus |
Query 76 SPKCALGDCTDSHNLPSRTFEEMSFC*ELEPKEYTLVKPDKTPGAIA*AETKL*ILATPQSRSAKEDF 279 +P+ L +S P + F E E T +KPD G + A TKL*I AT Q RSAKEDF Subject 1857 TPESKLTASIESRASPVAAKCGLEFLLERE*SM*T*IKPDDALGNVTCATTKL*IFAT*QERSAKEDF 2060
Rupestris stem pitting associated virus isolate RSPaV PN, complete genome
Sequence ID: AY368172.2 Length: 8743 Number of Matches: 11
Range 1: 1195 to 2124 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
525.7 bits(1141) | 0.0 | 218/310(70%) | 0/310(0%) | Minus/Plus |
Query 12 SLLMPNISKLVMSFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLIDITPDFFEHLFLFSCLNELIAEDIEEVMDGSWFGLGNLHFNRQRAPYSLGVSHWINSPFSVEHKFAGVINHQILYVALSLVPLSDDPSFKLTSREVDSALSSVRMALGVTGQSKLFGFLVNNTFINEVQRGYKLRLAQHLKSLTWLFHFCGCQWFLLCRRTNLKFLSDRKSSFADLDCGVAKIYSLVSAQAIAPGVLSGLTKVYSFGSNSQQKLISSNVLEGKLCESVQSPNAHFGETLVSHDQEGKVVTSTPHTSQL 941 SLLMPNISKLV SF CRMMPNALARLSSSFRE+SLDSFVYALEPFNF+VNLID+TPDFFEHLFLFSCLNEL+ E+IEEVMD SWFGL N+HFNRQRAPYSLG SHW++SPFSVEHKF G++NHQIL VALSL+PL +DP+F+ TS E++ +L S+RMAL T QSKLFGFLVN+ I+E+Q+ YK +LAQHLK+LTW FHFCG QWFLL +R NLKFL + KSSFADLDC VAK+Y+LV QAIAP LSGL KVY SN QQK + +G+ CE VQS +A + QEG+V TS PH +QL Subject 1195 SLLMPNISKLVTSFFCRMMPNALARLSSSFRESSLDSFVYALEPFNFAVNLIDVTPDFFEHLFLFSCLNELMEENIEEVMDNSWFGLSNVHFNRQRAPYSLGTSHWLSSPFSVEHKFTGIVNHQILQVALSLIPLPNDPAFRPTSEEINFSLLSIRMALESTRQSKLFGFLVNSALISEMQKKYKTKLAQHLKALTWFFHFCGLQWFLLSKRANLKFLGECKSSFADLDCNVAKLYNLVITQAIAPRALSGLIKVYVGSSNPQQKSNPQTIFDGESCELVQSFHAGIEGPQSCNSQEGEVATSIPHATQL 2124
Range 2: 1194 to 1805 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
294.8 bits(637) | 0.0 | 148/204(73%) | 0/204(0%) | Plus/Minus |
Query 331 QPQK*KSQVSDFKC*ASLNLYPLCTSFMKVLFTKKPKSFDCPVTPRAILTLERAESTSLEVNLKEGSSDNGTKDRATYRIWWLMTPANLCSTENGELIQCDTPREYGAL*RLKCKLPSPNHEPXXXXXXXXXXXXLRQENKNRCSKKSGVISIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINRE 942 +PQK*K+QVS FKC AS LY C S M+ LFTKKPKSFDC V RAIL L+R + S EV L GS +G KDRAT +I L P NLCSTE GEL QC+ P EYGAL RLK L SPNHE SITSSI S+I+SLRQENKNRCSKKSGV SIK T KLKGSRA*TNESSE SRKLED+LAKALGIIR KND+TSFEILGINRE Subject 1194 RPQK*KNQVSAFKCWASFVLYFFCISLMRALFTKKPKSFDCLVDSRAILMLKREKLISSEVGLNAGSFGSGIKDRATCKI**LTIPVNLCSTEKGELSQCEVPSEYGALWRLK*TLLSPNHELSITSSIFSSINSLRQENKNRCSKKSGVTSIKFTAKLKGSRA*TNESSEDSRKLEDSLAKALGIIRQKNDVTSFEILGINRE 1805
Range 3: 1860 to 2039 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
75.3 bits(158) | 0.0 | 37/60(62%) | 0/60(0%) | Plus/Minus |
Query 97 DCTDSHNLPSRTFEEMSFC*ELEPKEYTLVKPDKTPGAIA*AETKL*ILATPQSRSAKED 276 DCT+SH+ PS+ + FC LE TL+KPDK GAIA* TKL* LAT QSRSAKED Subject 1860 DCTNSHDSPSKMVWGLDFCWGLELPT*TLIKPDKALGAIA*VITKL*SLATLQSRSAKED 2039
Range 4: 1192 to 2124 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
297.1 bits(642) | 0.0 | 157/311(50%) | 0/311(0%) | Plus/Minus |
Query 12 QL*SVRGTCYNFSLLIVTN*GFSKVCVGGLH*FTQLAFKNIRRDELLLRIGAKRIYLS*A*QNPRGDSLS*NQAIDFSNTTIKVSKGGLSVT*KFEVGSSAQKKPLTTTEMKEPSQ*FQVLSKP*LIPSLHLIYESVIH*EAKKL*LPCNPKSHSYT*KSGINFPRSQLKRRII*QWDQGQSNIQNLVVNDTCKLVLNREWRVDPV*HP*GIWSPLTIKVQIAKSKP*AVHNFLNILCNQLIEAGEQK*MLKEVRGNIDQVNREVERLKSIDK*VK*SFAET*RQPG*GIRHHSTQK*HYQL*NIRHQ*RT 944 QL +R + LL VT C+ L+ FT A KN LL I I +* * + R +SLS NQ ++F + IK+ KGGL+ T KFEV S ++PL T EMK+PS+ FQVL + L+ LHL YE +H EAK+ *LP +SH Y *+ IN R + RII QW+QG SN+QNL++N+ KL+LNR+ R +PV* IWSPL I+V IAKS+P* +HN LNI +Q IEAGEQK*MLK+VRGNI+Q+ +V+R KSID+*VK* F +T* * +RHHS +K* L*NI H *RT Subject 1192 QLSGMRNARCDLPLLAVTRLRSFNACMERLYQFT*FAIKNGLGVRFLLGIRTANIDFN*T**SSRRNSLSYNQIVEFGDVAIKICKGGLTFTQKFEVSSLT*QEPLKTAEMKKPSECFQVLGEFRLVFFLHLTYEGAVHQEAKEF*LPRGLESHPYA*EGKINLLRGWPECRIIWQWNQG*SNLQNLMINNPRKLMLNRKGRAEPV*SSQ*IWSPLAIEVNIAKSEP*IIHNLLNIFLHQFIEAGEQK*MLKKVRGNINQIYCKVKRFKSIDE*VK*RFTKT*G*SS*SVRHHSAEK*RN*L*NIGH**RT 2124
Range 5: 1194 to 1961 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
195.3 bits(420) | 0.0 | 125/256(49%) | 0/256(0%) | Minus/Plus |
Query 175 FSIDA*YFKAGNVIFVSNDA*CLSQVVFKFPRNFT*LICLCS*AFQLLC*LDRYYP*LL*ASIFVLLPQ*ADCRGY*GSYGRLMVWTWQFAL*SSEGSIFPRGVTLDQLSILC*AQVCRCH*PPNSVCCSVLGPIVR*SFF*VDF*GS*FRSFKCKNGSWGYRAVKAFWLLSE*HFHK*GAERV*VKACSTLEITDLALSFLWLSMVSSVPKNQPQISK*PKVLLC*P*LWCC*NL*LGFSSGYRPWGFVRLN*GI 942 FSI+A YFKA VIF+ NDA* S + KF FT*LI LCS* F L D YP*L *ASIFVLLPQ* D Y*G YG MV T Q +L S +GSIF TL QLS+ C*A V * N CS+L +*S + *G *F K K+GS + A+K WLL E HK* AE++ + LE T L SFL SMV + ++ PQI * VLLC *L L G++SGY F+R N* + Subject 1194 FSINAQYFKASYVIFLPNDA*RFS*TILKFS*IFT*LIRLCS*TF*LCSKFD*CYP*LF*ASIFVLLPQ*IDGGKY*GGYG*FMVRT*QCSLQSPKGSIFTGNFTLAQLSLFC*A*VYGDC*SSNFAGCSILDSTAK*SCIQANL*GD*FFPLKHKDGSRVHEAIKTLWLLGEQRPHK*DAEKIQDETRPALESTHLVFSFLRSSMVPAK*ES*PQIFG*M*VLLCRS*LQRRQTLQFGYNSGYCA*SFIRFN*SL 1961
Range 6: 1373 to 1954 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
146.8 bits(314) | 0.0 | 91/194(47%) | 0/194(0%) | Plus/Minus |
Query 182 *LSLTKPQGR*PELKPSYRF*QHHNQGQQRRTFGHLEI*GWFFGTEETIDNHRNERAKSVISSVEQALTYTLSAPHL*KCYSLRSQKALTAL*PQEPFLHLKERNQLP*KST*KKDHLTMGPRTEQHTEFGG**HLQTCAQQRMES*SSVTPLGNMEPSDD*SANCQVQTMSRP*LPQYPLQSAH*GRRTKIDA 763 *L+L K +*PEL P+ R + NQ QRRT+ H +I*G TI++ RNE+ K V+SS + + SA HL* S RSQ+ L A +EP L L+ +N P + * +DHL + R EQ +F * T AQQ+ ES*+SV NMEP D*S +C V+TM+ P* PQY S H*GRRTKIDA Subject 1373 *LNLIKL*AQ*PEL*PNCRVWRRCNQDLQRRTYIHPKI*G*LSYLAGTIEDRRNEKTK*VLSSAGRVSSCIFSASHL*GRCSPRSQRVLIASWTREPSLCLRGKN*SPQRLA*MQDHLAVESRIEQPAKFDD*QSP*TYAQQKRES*ASVKFPVNMEPFGD*SEHC*VRTMNYP*PPQYFPPSIH*GRRTKIDA 1954
Range 7: 1193 to 1330 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
57.0 bits(118) | 0.0 | 29/46(63%) | 0/46(0%) | Plus/Minus |
Query 806 *KAQEHRQMSQVKFRGNLKTTWLRH*ASFDTKMTLPALKY*ASIEN 943 *K QEHR+MSQVK NL+ L+ *ASF KMT ALKY A IEN Subject 1193 *KVQEHRRMSQVKIHENLRIV*LKR*ASFGRKMT*LALKYWALIEN 1330
Range 8: 1664 to 2086 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
91.3 bits(193) | 0.0 | 60/141(43%) | 0/141(0%) | Minus/Plus |
Query 50 WLLGLQGSQSFLAS**ITLS*MRCREGIS*GLLNT*NH*LGSFISVVVNGFFCAEEPTSNF*VTESPPLLTLIVVLLKSIAWFQLRLSPLGFCQA*LRYILLAPILNRSSSLRMFLKASCVNQCSPPTHTLEKP*LVTIKR 472 WL +G+Q+ LAS * S*+RCR+ +T* H LG FIS V NG E TSNF V SPPL LI S W LRL L Q *L+ +L I +R+ + + FL A+ VN S L+ LVT KR Subject 1664 WLSSPRGNQNSLASW*TAPS*VRCRKNTRRNSPST*KHSLGFFISAVFNGSC*VRELTSNFWVNVSPPLQILIATSPNSTIWL*LRLLRLELYQV*LKSMLAVLIPSRNLTPKPFLMANHVNWYSLSMQALKDLNLVTAKR 2086
Range 9: 1376 to 1492 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
65.7 bits(137) | 0.0 | 26/39(67%) | 0/39(0%) | Minus/Plus |
Query 644 IYFCSPASMS*LQRILRKLWTAHGLDLAICTLIVRGLHI 760 IYFCSPASM+* ++ILR+LW HG DLA+ T I +GLHI Subject 1376 IYFCSPASMN*WRKILRRLWIIHGSDLAMFTSIAKGLHI 1492
Nucleotide Sequence (349 letters)
Query ID: | ds2016-132_4 |
Query definition: | No definition line |
Query length: | 951 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
278.3 | 1513.5 | 35% | 2.695e-73 | 93% | AB277783.1 | |
278.3 | 1513.5 | 35% | 2.695e-73 | 93% | AB331431.1 | |
278.3 | 1515.7 | 35% | 2.695e-73 | 93% | AB331436.1 | |
278.3 | 1423.2 | 35% | 2.695e-73 | 85% | AY927670.1 | |
278.3 | 1536.8 | 35% | 2.695e-73 | 95% | AY927675.1 |
Alignments
Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OB1
Sequence ID: AB277783.1 Length: 2876 Number of Matches: 6
Range 1: 2266 to 2613 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
278.3 bits(601) | 0.0 | 114/116(98%) | 0/116(0%) | Plus/Plus |
Query 1 GCIDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTMRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESA 348 G IDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTT+RRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESA Subject 2266 GAIDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESA 2613
Range 2: 2271 to 2612 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
252.6 bits(545) | 0.0 | 111/114(97%) | 0/114(0%) | Minus/Minus |
Query 6 ALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRWIFHTIFA*YMQNLRMVVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSDMPDSPNARINSSM 347 ALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRW+FHTIFA*YMQNLR VVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSDMPDSPNARINSS+ Subject 2271 ALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRWMFHTIFA*YMQNLRRVVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSDMPDSPNARINSSI 2612
Range 3: 2275 to 2613 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
252.2 bits(544) | 0.0 | 106/113(94%) | 0/113(0%) | Minus/Minus |
Query 10 RALICDSKEEVKGCKLFILIKSLLGPISGWNPRLQMDIPHDFRIVHAKSAHGSHFPYYSSNFRPIQVTEGTLSNQG*SLRATNIRAMACNIYRNVKLIAL*YARLTECSNQLI 348 RALICDSKEEVKGCKLFI IKSLLGPISGWNPRLQMD+PHDF IVHAKSA GSHFP YSSNFRPIQVTEGTLSN G*SLRATN+RAMACNIYRNVKLIAL*YARLTECSNQLI Subject 2275 RALICDSKEEVKGCKLFIFIKSLLGPISGWNPRLQMDVPHDFCIVHAKSAQGSHFPNYSSNFRPIQVTEGTLSN*G*SLRATNVRAMACNIYRNVKLIAL*YARLTECSNQLI 2613
Range 4: 2276 to 2614 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
247.6 bits(534) | 0.0 | 106/113(94%) | 0/113(0%) | Minus/Minus |
Query 11 ARSHL*LQGRSQRLQTFHSH*IPSWPN*RVESPSPDGYSTRFSHSTCKICAW*SLPLLFQQFQTYSGHRRDSFQSRLIFESYQHQSNGVQYLSQR*TDRSLICQTHRMLESTH 349 ARSHL*LQGRSQRLQTFH H*IPSWPN*RVESPSPDG STRF HSTCKICA *SLP LFQQFQTYSGHRRDSFQ RLIFESYQ QSNGVQYLSQR*TDRSLICQTHRMLESTH Subject 2276 ARSHL*LQGRSQRLQTFHFH*IPSWPN*RVESPSPDGCSTRFLHSTCKICAG*SLP*LFQQFQTYSGHRRDSFQLRLIFESYQRQSNGVQYLSQR*TDRSLICQTHRMLESTH 2614
Range 5: 2271 to 2612 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
242.1 bits(522) | 0.0 | 106/114(93%) | 0/114(0%) | Plus/Plus |
Query 6 HR*VDSSIR*VWHIRERSV*RCDRYCTPLL*CW*LSKINLDWKESLL*PE*V*NCWNNKGSDYHAQILHVLCENRVEYPSGDGDSTR*LGQEGI**E*KVCSL*LLPWSHR*ER 347 +R*VDSSIR*VWHIRERSV*RCDRYCTPLL* W*LSKINL+WKESLL*PE*V*NCWNN GSDY AQILHVLC+NRVE+PSGDGDSTR*LGQEGI**+*KVCSL*LLPWSHR*ER Subject 2271 NR*VDSSIR*VWHIRERSV*RCDRYCTPLL*RW*LSKINLNWKESLL*PE*V*NCWNN*GSDYPAQILHVLCKNRVEHPSGDGDSTR*LGQEGI**K*KVCSL*LLPWSHR*ER 2612
Range 6: 2276 to 2614 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
240.7 bits(519) | 0.0 | 108/113(96%) | 0/113(0%) | Plus/Plus |
Query 11 MS*FEHSVSLAYQRAISLTLR*ILHAIALMLVALKDQP*LERVPSVT*IGLKLLE**GK*LPCADFACTMRKSCGISIWRRGFHPLIGPRRDLMRMKSLQPLTSSLESQMRAR 349 MS*FEHSVSLAYQRAISLTLR*ILHAIAL LVALKDQP*LERVPSVT*IGLKLLE* GK*LPCADFACTM+KSCG SIWRRGFHPLIGPRRDLM+MKSLQPLTSSLESQMRAR Subject 2276 MS*FEHSVSLAYQRAISLTLR*ILHAIALTLVALKDQP*LERVPSVT*IGLKLLE*LGK*LPCADFACTMQKSCGTSIWRRGFHPLIGPRRDLMKMKSLQPLTSSLESQMRAR 2614
Rupestris stem pitting associated virus gene for coat protein, complete cds, strain: Hiz1
Sequence ID: AB331431.1 Length: 780 Number of Matches: 6
Range 1: 241 to 588 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
278.3 bits(601) | 0.0 | 114/116(98%) | 0/116(0%) | Plus/Plus |
Query 1 GCIDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTMRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESA 348 G IDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTT+RRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESA Subject 241 GAIDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESA 588
Range 2: 246 to 587 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
252.6 bits(545) | 0.0 | 111/114(97%) | 0/114(0%) | Minus/Minus |
Query 6 ALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRWIFHTIFA*YMQNLRMVVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSDMPDSPNARINSSM 347 ALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRW+FHTIFA*YMQNLR VVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSDMPDSPNARINSS+ Subject 246 ALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRWMFHTIFA*YMQNLRRVVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSDMPDSPNARINSSI 587
Range 3: 250 to 588 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
252.2 bits(544) | 0.0 | 106/113(94%) | 0/113(0%) | Minus/Minus |
Query 10 RALICDSKEEVKGCKLFILIKSLLGPISGWNPRLQMDIPHDFRIVHAKSAHGSHFPYYSSNFRPIQVTEGTLSNQG*SLRATNIRAMACNIYRNVKLIAL*YARLTECSNQLI 348 RALICDSKEEVKGCKLFI IKSLLGPISGWNPRLQMD+PHDF IVHAKSA GSHFP YSSNFRPIQVTEGTLSN G*SLRATN+RAMACNIYRNVKLIAL*YARLTECSNQLI Subject 250 RALICDSKEEVKGCKLFIFIKSLLGPISGWNPRLQMDVPHDFCIVHAKSAQGSHFPNYSSNFRPIQVTEGTLSN*G*SLRATNVRAMACNIYRNVKLIAL*YARLTECSNQLI 588
Range 4: 251 to 589 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
247.6 bits(534) | 0.0 | 106/113(94%) | 0/113(0%) | Minus/Minus |
Query 11 ARSHL*LQGRSQRLQTFHSH*IPSWPN*RVESPSPDGYSTRFSHSTCKICAW*SLPLLFQQFQTYSGHRRDSFQSRLIFESYQHQSNGVQYLSQR*TDRSLICQTHRMLESTH 349 ARSHL*LQGRSQRLQTFH H*IPSWPN*RVESPSPDG STRF HSTCKICA *SLP LFQQFQTYSGHRRDSFQ RLIFESYQ QSNGVQYLSQR*TDRSLICQTHRMLESTH Subject 251 ARSHL*LQGRSQRLQTFHFH*IPSWPN*RVESPSPDGCSTRFLHSTCKICAG*SLP*LFQQFQTYSGHRRDSFQLRLIFESYQRQSNGVQYLSQR*TDRSLICQTHRMLESTH 589
Range 5: 246 to 587 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
242.1 bits(522) | 0.0 | 106/114(93%) | 0/114(0%) | Plus/Plus |
Query 6 HR*VDSSIR*VWHIRERSV*RCDRYCTPLL*CW*LSKINLDWKESLL*PE*V*NCWNNKGSDYHAQILHVLCENRVEYPSGDGDSTR*LGQEGI**E*KVCSL*LLPWSHR*ER 347 +R*VDSSIR*VWHIRERSV*RCDRYCTPLL* W*LSKINL+WKESLL*PE*V*NCWNN GSDY AQILHVLC+NRVE+PSGDGDSTR*LGQEGI**+*KVCSL*LLPWSHR*ER Subject 246 NR*VDSSIR*VWHIRERSV*RCDRYCTPLL*RW*LSKINLNWKESLL*PE*V*NCWNN*GSDYPAQILHVLCKNRVEHPSGDGDSTR*LGQEGI**K*KVCSL*LLPWSHR*ER 587
Range 6: 251 to 589 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
240.7 bits(519) | 0.0 | 108/113(96%) | 0/113(0%) | Plus/Plus |
Query 11 MS*FEHSVSLAYQRAISLTLR*ILHAIALMLVALKDQP*LERVPSVT*IGLKLLE**GK*LPCADFACTMRKSCGISIWRRGFHPLIGPRRDLMRMKSLQPLTSSLESQMRAR 349 MS*FEHSVSLAYQRAISLTLR*ILHAIAL LVALKDQP*LERVPSVT*IGLKLLE* GK*LPCADFACTM+KSCG SIWRRGFHPLIGPRRDLM+MKSLQPLTSSLESQMRAR Subject 251 MS*FEHSVSLAYQRAISLTLR*ILHAIALTLVALKDQP*LERVPSVT*IGLKLLE*LGK*LPCADFACTMQKSCGTSIWRRGFHPLIGPRRDLMKMKSLQPLTSSLESQMRAR 589
Rupestris stem pitting associated virus gene for coat protein, complete cds, strain: Hiz12 1
Sequence ID: AB331436.1 Length: 780 Number of Matches: 6
Range 1: 241 to 588 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
278.3 bits(601) | 0.0 | 114/116(98%) | 0/116(0%) | Plus/Plus |
Query 1 GCIDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTMRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESA 348 G IDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTT+RRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESA Subject 241 GAIDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESA 588
Range 2: 250 to 588 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
256.3 bits(553) | 0.0 | 107/113(95%) | 0/113(0%) | Minus/Minus |
Query 10 RALICDSKEEVKGCKLFILIKSLLGPISGWNPRLQMDIPHDFRIVHAKSAHGSHFPYYSSNFRPIQVTEGTLSNQG*SLRATNIRAMACNIYRNVKLIAL*YARLTECSNQLI 348 RALICDSKEEVKGCKLFI IKSLLGPISGWNPRLQMD+PHDF IVHAKSA GSHFP YSSNFRPIQVTEGTLSNQG*SLRATN+RAMACNIYRNVKLIAL*YARLTECSNQLI Subject 250 RALICDSKEEVKGCKLFIFIKSLLGPISGWNPRLQMDVPHDFCIVHAKSAQGSHFPNYSSNFRPIQVTEGTLSNQG*SLRATNVRAMACNIYRNVKLIAL*YARLTECSNQLI 588
Range 3: 246 to 587 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
252.6 bits(545) | 0.0 | 111/114(97%) | 0/114(0%) | Minus/Minus |
Query 6 ALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRWIFHTIFA*YMQNLRMVVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSDMPDSPNARINSSM 347 ALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRW+FHTIFA*YMQNLR VVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSDMPDSPNARINSS+ Subject 246 ALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRWMFHTIFA*YMQNLRRVVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSDMPDSPNARINSSI 587
Range 4: 251 to 589 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
246.7 bits(532) | 0.0 | 106/113(94%) | 0/113(0%) | Minus/Minus |
Query 11 ARSHL*LQGRSQRLQTFHSH*IPSWPN*RVESPSPDGYSTRFSHSTCKICAW*SLPLLFQQFQTYSGHRRDSFQSRLIFESYQHQSNGVQYLSQR*TDRSLICQTHRMLESTH 349 ARSHL*LQGRSQRLQTFH H*IPSWPN*RVESPSPDG STRF HSTCKICA *SLP LFQQFQTYSGHRRDSFQSRLI ESYQ QSNGVQYLSQR*TDRSLICQTHRMLESTH Subject 251 ARSHL*LQGRSQRLQTFHFH*IPSWPN*RVESPSPDGCSTRFLHSTCKICAG*SLP*LFQQFQTYSGHRRDSFQSRLISESYQRQSNGVQYLSQR*TDRSLICQTHRMLESTH 589
Range 5: 246 to 587 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
242.5 bits(523) | 0.0 | 106/114(93%) | 0/114(0%) | Plus/Plus |
Query 6 HR*VDSSIR*VWHIRERSV*RCDRYCTPLL*CW*LSKINLDWKESLL*PE*V*NCWNNKGSDYHAQILHVLCENRVEYPSGDGDSTR*LGQEGI**E*KVCSL*LLPWSHR*ER 347 +R*VDSSIR*VWHIRERSV*RCDRYCTPLL* W*LS+INLDWKESLL*PE*V*NCWNN GSDY AQILHVLC+NRVE+PSGDGDSTR*LGQEGI**+*KVCSL*LLPWSHR*ER Subject 246 NR*VDSSIR*VWHIRERSV*RCDRYCTPLL*RW*LSEINLDWKESLL*PE*V*NCWNN*GSDYPAQILHVLCKNRVEHPSGDGDSTR*LGQEGI**K*KVCSL*LLPWSHR*ER 587
Range 6: 251 to 589 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
239.3 bits(516) | 0.0 | 107/113(95%) | 0/113(0%) | Plus/Plus |
Query 11 MS*FEHSVSLAYQRAISLTLR*ILHAIALMLVALKDQP*LERVPSVT*IGLKLLE**GK*LPCADFACTMRKSCGISIWRRGFHPLIGPRRDLMRMKSLQPLTSSLESQMRAR 349 MS*FEHSVSLAYQRAISLTLR*ILHAIAL LVAL+DQP*LERVPSVT*IGLKLLE* GK*LPCADFACTM+KSCG SIWRRGFHPLIGPRRDLM+MKSLQPLTSSLESQMRAR Subject 251 MS*FEHSVSLAYQRAISLTLR*ILHAIALTLVALRDQP*LERVPSVT*IGLKLLE*LGK*LPCADFACTMQKSCGTSIWRRGFHPLIGPRRDLMKMKSLQPLTSSLESQMRAR 589
Rupestris stem pitting associated virus isolate A8.4 coat protein gene, complete cds
Sequence ID: AY927670.1 Length: 780 Number of Matches: 6
Range 1: 241 to 588 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
278.3 bits(601) | 0.0 | 114/116(98%) | 0/116(0%) | Plus/Plus |
Query 1 GCIDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTMRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESA 348 G IDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTT+RRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESA Subject 241 GAIDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESA 588
Range 2: 246 to 587 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
251.2 bits(542) | 0.0 | 110/114(96%) | 0/114(0%) | Minus/Minus |
Query 6 ALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRWIFHTIFA*YMQNLRMVVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSDMPDSPNARINSSM 347 ALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRW+FHTIFA*YMQNLR VVTSLIIPAISDLF+SQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSDMPDSPNARINSS+ Subject 246 ALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRWMFHTIFA*YMQNLRRVVTSLIIPAISDLFKSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSDMPDSPNARINSSI 587
Range 3: 250 to 588 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
233.4 bits(503) | 0.0 | 98/113(87%) | 0/113(0%) | Minus/Minus |
Query 10 RALICDSKEEVKGCKLFILIKSLLGPISGWNPRLQMDIPHDFRIVHAKSAHGSHFPYYSSNFRPIQVTEGTLSNQG*SLRATNIRAMACNIYRNVKLIAL*YARLTECSNQLI 348 RALICD+KEEVKGCKL I IKS LGPISGWNPRLQMD+PHDF IVHAKSA G +FPYYSSNFR IQVTEGTLS QG*SLRATNIRAMACNIY NV+LI L*YARL ECSNQLI Subject 250 RALICDAKEEVKGCKLLIFIKSFLGPISGWNPRLQMDVPHDFCIVHAKSAQGGYFPYYSSNFRSIQVTEGTLSYQG*SLRATNIRAMACNIYCNVELITL*YARLAECSNQLI 588
Range 4: 251 to 589 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
221.5 bits(477) | 0.0 | 97/113(86%) | 0/113(0%) | Minus/Minus |
Query 11 ARSHL*LQGRSQRLQTFHSH*IPSWPN*RVESPSPDGYSTRFSHSTCKICAW*SLPLLFQQFQTYSGHRRDSFQSRLIFESYQHQSNGVQYLSQR*TDRSLICQTHRMLESTH 349 ARSHL* QGRSQRLQT H H*I SWPN*RVESPSPDG STRF HSTCKICA LPLLFQQFQ YS HRRDSF SRLIFESYQHQSNGVQYL QR* D SLICQT RMLESTH Subject 251 ARSHL*RQGRSQRLQTSHFH*ILSWPN*RVESPSPDGCSTRFLHSTCKICAGWLLPLLFQQFQIYSSHRRDSFLSRLIFESYQHQSNGVQYLLQR*IDHSLICQTRRMLESTH 589
Range 5: 251 to 589 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
220.5 bits(475) | 0.0 | 99/113(88%) | 0/113(0%) | Plus/Plus |
Query 11 MS*FEHSVSLAYQRAISLTLR*ILHAIALMLVALKDQP*LERVPSVT*IGLKLLE**GK*LPCADFACTMRKSCGISIWRRGFHPLIGPRRDLMRMKSLQPLTSSLESQMRAR 349 MS*FEHS SLAYQR I+ TL+*ILHAIALMLVALKDQP* ERVPSVT*I LKLLE**GK* PCADFACTM+KSCG SIWRRGFHPLIGPR+DLM+M+SLQPLTSSL SQMRAR Subject 251 MS*FEHSASLAYQRVINSTLQ*ILHAIALMLVALKDQP**ERVPSVT*IDLKLLE**GK*PPCADFACTMQKSCGTSIWRRGFHPLIGPRKDLMKMRSLQPLTSSLASQMRAR 589
Range 6: 249 to 587 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
218.3 bits(470) | 0.0 | 96/113(85%) | 0/113(0%) | Plus/Plus |
Query 9 R*VDSSIR*VWHIRERSV*RCDRYCTPLL*CW*LSKINLDWKESLL*PE*V*NCWNNKGSDYHAQILHVLCENRVEYPSGDGDSTR*LGQEGI**E*KVCSL*LLPWSHR*ER 347 R*VDSSIR VWHIRE S+ RC+RYCTPLL*CW*LSKINLD KESLL* E*+*NCWNNKGS++ AQILHVLC+NRVE+PSGDGDSTR*LGQE I**+*+VCSL*LLPW HR*ER Subject 249 R*VDSSIRRVWHIRE*SIQRCNRYCTPLL*CW*LSKINLDRKESLL*LE*I*NCWNNKGSNHPAQILHVLCKNRVEHPSGDGDSTR*LGQERI**K*EVCSL*LLPWRHR*ER 587
Rupestris stem pitting associated virus isolate M37 12 coat protein gene, complete cds
Sequence ID: AY927675.1 Length: 780 Number of Matches: 6
Range 1: 241 to 588 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
278.3 bits(601) | 0.0 | 114/116(98%) | 0/116(0%) | Plus/Plus |
Query 1 GCIDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTMRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESA 348 G IDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTT+RRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESA Subject 241 GAIDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESA 588
Range 2: 251 to 589 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
255.4 bits(551) | 0.0 | 108/113(96%) | 0/113(0%) | Minus/Minus |
Query 11 ARSHL*LQGRSQRLQTFHSH*IPSWPN*RVESPSPDGYSTRFSHSTCKICAW*SLPLLFQQFQTYSGHRRDSFQSRLIFESYQHQSNGVQYLSQR*TDRSLICQTHRMLESTH 349 ARSHL* QGRSQRLQTFH H*IPSWPN*RVESPSPDGYSTRF HSTCKICA *SLPLLFQQFQTYSGHRRDSFQSRLIFESYQH SNGVQYLSQR*TDRSLICQTHRMLESTH Subject 251 ARSHL*PQGRSQRLQTFHFH*IPSWPN*RVESPSPDGYSTRFLHSTCKICAG*SLPLLFQQFQTYSGHRRDSFQSRLIFESYQHLSNGVQYLSQR*TDRSLICQTHRMLESTH 589
Range 3: 250 to 588 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
254.9 bits(550) | 0.0 | 108/113(96%) | 0/113(0%) | Minus/Minus |
Query 10 RALICDSKEEVKGCKLFILIKSLLGPISGWNPRLQMDIPHDFRIVHAKSAHGSHFPYYSSNFRPIQVTEGTLSNQG*SLRATNIRAMACNIYRNVKLIAL*YARLTECSNQLI 348 RALICD KEEVKGCKLFI IKSLLGPISGWNPRLQMDIPHDF IVHAKSA GSHFPYYSSNFRPIQVTEGTLSNQG*SLRATNI AMACNIYRNVKLIAL*YARLTECSNQLI Subject 250 RALICDPKEEVKGCKLFIFIKSLLGPISGWNPRLQMDIPHDFCIVHAKSAQGSHFPYYSSNFRPIQVTEGTLSNQG*SLRATNI*AMACNIYRNVKLIAL*YARLTECSNQLI 588
Range 4: 246 to 587 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
254.0 bits(548) | 0.0 | 112/114(98%) | 0/114(0%) | Minus/Minus |
Query 6 ALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRWIFHTIFA*YMQNLRMVVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSDMPDSPNARINSSM 347 ALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRWIFHTIFA*YMQNLR VVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSDMPDSPNARINSS+ Subject 246 ALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRWIFHTIFA*YMQNLRRVVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSDMPDSPNARINSSI 587
Range 5: 246 to 587 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
252.2 bits(544) | 0.0 | 108/114(95%) | 0/114(0%) | Plus/Plus |
Query 6 HR*VDSSIR*VWHIRERSV*RCDRYCTPLL*CW*LSKINLDWKESLL*PE*V*NCWNNKGSDYHAQILHVLCENRVEYPSGDGDSTR*LGQEGI**E*KVCSL*LLPWSHR*ER 347 +R*VDSSIR*VWHIRERSV*RCDRYCTPLL CW*LSKINLDWKESLL*PE*V*NCWNNKGSDY AQILHVLC+NRVEYPSGDGDSTR*LGQEGI**+*KVCSL*LLPW HR*ER Subject 246 NR*VDSSIR*VWHIRERSV*RCDRYCTPLLRCW*LSKINLDWKESLL*PE*V*NCWNNKGSDYPAQILHVLCKNRVEYPSGDGDSTR*LGQEGI**K*KVCSL*LLPWGHR*ER 587
Range 6: 251 to 589 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
242.1 bits(522) | 0.0 | 109/113(96%) | 0/113(0%) | Plus/Plus |
Query 11 MS*FEHSVSLAYQRAISLTLR*ILHAIALMLVALKDQP*LERVPSVT*IGLKLLE**GK*LPCADFACTMRKSCGISIWRRGFHPLIGPRRDLMRMKSLQPLTSSLESQMRAR 349 MS*FEHSVSLAYQRAISLTLR*ILHAIA MLVALKDQP*LERVPSVT*IGLKLLE**GK*LPCADFACTM+KSCGISIWRRGFHPLIGPRRDLM+MKSLQPLTSSL SQMRAR Subject 251 MS*FEHSVSLAYQRAISLTLR*ILHAIAQMLVALKDQP*LERVPSVT*IGLKLLE**GK*LPCADFACTMQKSCGISIWRRGFHPLIGPRRDLMKMKSLQPLTSSLGSQMRAR 589
Nucleotide Sequence (675 letters)
Query ID: | ds2016-132_4 |
Query definition: | No definition line |
Query length: | 951 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
496.8 | 2340.5 | 38% | 1.167e-138 | 68% | KR054734.1 | |
492.7 | 2009.4 | 37% | 2.035e-137 | 62% | KX958435.1 | |
489.1 | 1983.7 | 37% | 2.582e-136 | 60% | KT948710.1 | |
488.1 | 1855.9 | 31% | 4.874e-136 | 54% | AY368172.2 | |
486.3 | 1601.3 | 36% | 1.736e-135 | 43% | JX559646.1 |
Alignments
Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome
Sequence ID: KR054734.1 Length: 8753 Number of Matches: 9
Range 1: 5332 to 5988 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
496.8 bits(1078) | 0.0 | 215/219(98%) | 0/219(0%) | Plus/Plus |
Query 3 GELLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVNMFNEAVQEFEXXXXXXXXXTIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVKARNFTGICTESDYEAFDASQDHFILSFELQVMRFLGLP 659 GE LSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVNMFNEAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVKAR FTG+CTESDYEAFDASQDHFIL+FELQVMRFLGLP Subject 5332 GEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVNMFNEAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVKARGFTGVCTESDYEAFDASQDHFILAFELQVMRFLGLP 5988
Range 2: 5339 to 5956 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
381.4 bits(826) | 0.0 | 167/206(81%) | 0/206(0%) | Minus/Minus |
Query 10 QMTR*SDPERHQMPHNLILCKCL*SFAL*PIH*VHQDLYQSECKNSVLKLA*ASFQCTSYKEQNEPKLHVESRPKFAQP*LPLIYCQILYNVGIS*KLKRHLVANPDMTCLNDSL*LQHFC*PFWLQTPELPH*TY*HCG*HSMELLTKMCQAETFHKALHALASQPPLVALKTLNASGQPLKK*WNHYPYV*GKCFQIFHKHCLI 627 QM *+D HQ H+LIL L*+ L*PIH HQDL Q+EC+N V A*ASFQC + + Q+EP+ VESRPKFAQP* P IYCQILYNVGIS*KLKRHLVANPDMTCLNDSL*LQHFC*PF LQTPELPH*TY*HCG*HSMELLTKMCQAE FHKAL ALA QPPLVALKTLNASGQPLKK*WNHYPYV*GKCFQIFHKHCLI Subject 5339 QMPG*NDLGMHQKLHSLILYTHL*NL*L*PIHLAHQDLCQNECRNLVSMPA*ASFQCIACRVQSEPRRRVESRPKFAQP*PPSIYCQILYNVGIS*KLKRHLVANPDMTCLNDSL*LQHFC*PF*LQTPELPH*TY*HCG*HSMELLTKMCQAEIFHKALRALALQPPLVALKTLNASGQPLKK*WNHYPYV*GKCFQIFHKHCLI 5956
Range 3: 5336 to 5989 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
374.0 bits(810) | 0.0 | 175/218(80%) | 0/218(0%) | Plus/Plus |
Query 7 SY*AMLVKDLKAFTLDIRVMIPSLF*WLSGSV*SFQSHKWRLRS*GVQSLMESFCLTHFCQKFH*MLATMSICSMRQFRSLKPKRLAKVLQL*RIIQAGHVGIGY*MSL*FS*NPNIVQNLTID*G*LRLGKLWPAFNMQFWFVLLLI*GTLKRSSCKL*NRIFTFTLVKVLMNLMNGLKRETLQAFAQNQIMRHLMPLRITSSCHLSCK*CGF*GCQ 660 S *AMLVKDLKAFTLDIRVMIPSLF*WLSGSV*SFQSHKWRL+S*G QSLME+FCLTHFCQKFH*MLATMSICSMRQFRSLK KRLAKVLQL*RIIQAGHVGIGY*MSL*FS*NPNIVQNLTID*G LRLGKLWPAFN WF L TLKRS C+ *N+I TF L KVLM+ MNGLK E Q QNQ M+ LM +I SS HL+CK F* CQ Subject 5336 SN*AMLVKDLKAFTLDIRVMIPSLF*WLSGSV*SFQSHKWRLQS*GAQSLMENFCLTHFCQKFH*MLATMSICSMRQFRSLKLKRLAKVLQL*RIIQAGHVGIGY*MSL*FS*NPNIVQNLTID*GWLRLGKLWPAFNTPSWFALHPTCDTLKRSLCRH*NQISTFILAKVLMS*MNGLKLEVSQVCVQNQTMKLLMHPKIISSWHLNCKL*DF*DCQ 5989
Range 4: 5470 to 5988 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
305.8 bits(661) | 0.0 | 134/173(77%) | 0/173(0%) | Minus/Minus |
Query 141 WQP*KPHYLQLK*QDEVILRGIKCLII*FCANACKVSRFNPFIKFIKTFTRVNVKIRF*SLHELLFNVPHIRSKTNQNCMLKAGQSLPSLSYP*SIVKFCTMLGFHEN*SDI**PIPT*PA*MILYSCSTFASLFGFKLLNCLIEHIDIVASIQWNF*QKCVKQKLSIRLCTP 659 WQ *K H LQ K QDE+IL IK I+*FC + C+ S FNPFI IKTF R+NV+I F LH+LLFNV H+ K NQ+ +LKAGQSLPSLS+P SIVKFCTMLGFHEN*SDI**PIPT*PA*MILYSCSTFASLF FKLLNCLIEHIDIVASIQWNF*QKCVKQK SIRLC P Subject 5470 WQS*KSHNLQFKCQDEMILGCIKSFIV*FCTHTCETSSFNPFI*LIKTFARMNVEIWFQCLHKLLFNVSHVGCKANQDGVLKAGQSLPSLSHPQSIVKFCTMLGFHEN*SDI**PIPT*PA*MILYSCSTFASLFSFKLLNCLIEHIDIVASIQWNF*QKCVKQKFSIRLCAP 5988
Range 5: 5341 to 5424 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
62.9 bits(131) | 0.0 | 28/28(100%) | 0/28(0%) | Minus/Minus |
Query 12 PDSH*KSDGIITLMSRVNAFKSFTSIA* 95 PDSH*KSDGIITLMSRVNAFKSFTSIA* Subject 5341 PDSH*KSDGIITLMSRVNAFKSFTSIA* 5424
Range 6: 5601 to 5996 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
203.1 bits(437) | 0.0 | 90/132(68%) | 0/132(0%) | Plus/Plus |
Query 272 CCNYRESFRQVMSGLATRCRFNFHEIPTLYKI*Q*IKGS*GWANFGLLSTCSFGSFCSLYEVH*KEAHASFKTEFLHSLW*RS**T**MG*SAKLYRHLHRIRL*GI*CLSGSLHLVI*VASNAVFRVAKHT 667 CCNYRESFRQVMSGLATRCRFNFHEIPTLYKI*Q*I+G *GWANFGLLST GS C+L+ +H*KEA+A +T+FLHS W RS** *MG*S + +R ++RIRL* *C+ S H I* AS +FR A+ + Subject 5601 CCNYRESFRQVMSGLATRCRFNFHEIPTLYKI*Q*IEGG*GWANFGLLSTRRLGSLCTLHAIH*KEAYAGIETKFLHSFWQRS**AK*MG*S*RFHRCVYRIRL*SF*CIPRSFHPGI*TASYEIFRTARRS 5996
Range 7: 5340 to 5552 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
161.9 bits(347) | 0.0 | 68/71(96%) | 0/71(0%) | Plus/Plus |
Query 11 IKQCL*KI*KHLP*T*G**FHHFFNGCPEAFKVFKATSGGCEAKACKALWKVSA*HIFVKSSIEC*PQCQY 223 IKQCL*KI*KHLP*T*G**FHHFFNGCPEAFKVFKATSGGC+AKA KALWK+SA*HIFVKSSIEC*PQCQY Subject 5340 IKQCL*KI*KHLP*T*G**FHHFFNGCPEAFKVFKATSGGCKAKARKALWKISA*HIFVKSSIEC*PQCQY 5552
Range 8: 5619 to 5987 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
216.9 bits(467) | 0.0 | 106/123(86%) | 0/123(0%) | Minus/Minus |
Query 290 GNPKNRITCNSNDKMK*XXXXXXXXXXXSVQMPVKFRALTHSLSSSRPLPE*M*KFGFKACMSFFSMYLI*GAKRTKTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE* 658 G+PKN ITC+SN +MK*S +AS AS*SDSV PVK ALTHS SSSRPLPE*M*KFGF AC+SFFSMY +*GAKRTKTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE* Subject 5619 GSPKNLITCSSNARMK*SWDASKAS*SDSVHTPVKPLALTHSFSSSRPLPE*M*KFGFNACISFFSMYRM*GAKRTKTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE* 5987
Range 9: 5370 to 5540 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
137.6 bits(294) | 0.0 | 57/57(100%) | 0/57(0%) | Minus/Minus |
Query 41 WLAFNGTFDKNVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*M 211 WLAFNGTFDKNVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*M Subject 5370 WLAFNGTFDKNVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*M 5540
Grapevine rupestris stem pitting associated virus isolate CS BR, complete genome
Sequence ID: KX958435.1 Length: 8743 Number of Matches: 10
Range 1: 5333 to 5989 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
492.7 bits(1069) | 0.0 | 212/219(97%) | 0/219(0%) | Plus/Plus |
Query 3 GELLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVNMFNEAVQEFEXXXXXXXXXTIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVKARNFTGICTESDYEAFDASQDHFILSFELQVMRFLGLP 659 GE LSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVNMF+EAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWV+AR FTG+CTESDYEAFDASQDHFIL+FELQ+MRFLGLP Subject 5333 GEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVNMFHEAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVRARGFTGVCTESDYEAFDASQDHFILAFELQIMRFLGLP 5989
Range 2: 5620 to 5901 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
192.1 bits(413) | 0.0 | 84/94(89%) | 0/94(0%) | Minus/Minus |
Query 290 VQMPVKFRALTHSLSSSRPLPE*M*KFGFKACMSFFSMYLI*GAKRTKTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE* 571 V PVK ALTHS SSSRPLPE*+*K GF ACMSFFSMY +*GAKRTKTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE* Subject 5620 VHTPVKPLALTHSFSSSRPLPE*I*KLGFNACMSFFSMYRM*GAKRTKTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE* 5901
Range 3: 5371 to 5541 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.1 bits(282) | 0.0 | 54/57(95%) | 0/57(0%) | Minus/Minus |
Query 41 WLAFNGTFDKNVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*M 211 WLAFNGTFD+ VSSRNFP*GFARLSFAASTCGFENF+RFRTAIKKVMESLPLCLG*M Subject 5371 WLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFRRFRTAIKKVMESLPLCLG*M 5541
Range 4: 5941 to 5988 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
29.9 bits(59) | 0.0 | 11/16(69%) | 0/16(0%) | Minus/Minus |
Query 611 GNPKNRITCNSNDKMK 658 G+PKN I C+SN KMK Subject 5941 GSPKNLIICSSNAKMK 5988
Range 5: 5340 to 5957 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
293.4 bits(634) | 0.0 | 135/206(66%) | 0/206(0%) | Minus/Minus |
Query 10 QMTR*SDPERHQMPHNLILCKCL*SFAL*PIH*VHQDLYQSECKNSVLKLA*ASFQCTSYKEQNEPKLHVESRPKFAQP*LPLIYCQILYNVGIS*KLKRHLVANPDMTCLNDSL*LQHFC*PFWLQTPELPH*TY*HCG*HSMELLTKMCQAETFHKALHALASQPPLVALKTLNASGQPLKK*WNHYPYV*GKCFQIFHKHCLI 627 QM R*+ P HQ H+L LC L*+ *PIH HQDL SE ++ V LA*ASFQC + K Q+EPK ESRPKFAQP* PLIYCQILYNVGIS*+LK+HL ANP MTCL+D LQHFC*P QTP LPH TY*HCG*H M L CQA HKALHALASQ P VALKT G+PLK+*W+H P V* KCFQ H+HCLI Subject 5340 QMPR*NGPGMHQKLHSLTLCIHL*NLLP*PIHLAHQDLCLSEYRSWVSMLA*ASFQCIACKVQSEPKQRAESRPKFAQP*PPLIYCQILYNVGIS*RLKQHLAANPGMTCLSDFQWLQHFC*PSLPQTPALPHETY*HCG*HLMGLSIGKCQAGISHKALHALASQLPPVALKTSGVFGRPLKR*WSHCPCV*DKCFQNVHRHCLI 5957
Range 6: 5337 to 5990 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
282.4 bits(610) | 0.0 | 142/218(65%) | 0/218(0%) | Plus/Plus |
Query 7 SY*AMLVKDLKAFTLDIRVMIPSLF*WLSGSV*SFQSHKWRLRS*GVQSLMESFCLTHFCQKFH*MLATMSICSMRQFRSLKPKRLAKVLQL*RIIQAGHVGIGY*MSL*FS*NPNIVQNLTID*G*LRLGKLWPAFNMQFWFVLLLI*GTLKRSSCKL*NRIFTFTLVKVLMNLMNGLKRETLQAFAQNQIMRHLMPLRITSSCHLSCK*CGF*GCQ 660 S *AM V LKAF LD R M P F*W S + *SFQSH+W+LRS*GVQSLM + CLT +K H*MLATM IC MRQ RSL+ +RLAKVLQ +I QAGH GIG *M L* S*NPNIVQNLTID*G LRLGKLWPAF+ FWF L L TLKRSSCK *N FT KVLM+ MNGL +E Q +AQ+Q M+ LM R SS HL+CK F* CQ Subject 5337 SN*AMPVNVLKAFILDTRAMTPLPF*WPSENA*SFQSHRWKLRS*GVQSLMGNSCLTLSYRKSH*MLATMLICFMRQCRSLRQRRLAKVLQPLKITQAGHAGIGC*MLL*SS*NPNIVQNLTID*GWLRLGKLWPAFSTLFWFALHLTCDTLKRSSCKH*NPTSIFTQAKVLMS*MNGLGQEVSQVYAQSQTMKLLMHPRTISSWHLNCKL*DF*DCQ 5990
Range 7: 5471 to 5989 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
250.3 bits(540) | 0.0 | 113/173(65%) | 0/173(0%) | Minus/Minus |
Query 141 WQP*KPHYLQLK*QDEVILRGIKCLII*FCANACKVSRFNPFIKFIKTFTRVNVKIRF*SLHELLFNVPHIRSKTNQNCMLKAGQSLPSLSYP*SIVKFCTMLGFHEN*SDI**PIPT*PA*MILYSCSTFASLFGFKLLNCLIEHIDIVASIQWNF*QKCVKQKLSIRLCTP 659 WQ *K H LQ K QDE++L IK I+* CA C+ S NPFI IKTF VN+++ F LHELLFNV H+R K NQN +LKAGQSLPSLS+P*SIVKFCTMLGFHE+*S+I* PIP *PA*+I CSTFASL KLL+CL++HI+IVASI W+F + VKQ+ IRLCTP Subject 5471 WQS*KSHNLQFKCQDEMVLGCIKSFIV*LCAYTCETSCPNPFI*LIKTFA*VNIEVGFQCLHELLFNVSHVRCKANQNSVLKAGQSLPSLSHP*SIVKFCTMLGFHED*SNI*QPIPA*PA*VIFNGCSTFASLLCLKLLHCLMKHINIVASI*WDFR*ESVKQEFPIRLCTP 5989
Range 8: 5342 to 5422 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
45.5 bits(93) | 0.0 | 18/27(67%) | 0/27(0%) | Minus/Minus |
Query 12 DSH*KSDGIITLMSRVNAFKSFTSIA* 92 D H*K +G+I L+SR+NAFK+FT IA* Subject 5342 DGH*KGNGVIALVSRINAFKTFTGIA* 5422
Range 9: 5602 to 5997 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
183.9 bits(395) | 0.0 | 82/132(62%) | 0/132(0%) | Plus/Plus |
Query 272 CCNYRESFRQVMSGLATRCRFNFHEIPTLYKI*Q*IKGS*GWANFGLLSTCSFGSFCSLYEVH*KEAHASFKTEFLHSLW*RS**T**MG*SAKLYRHLHRIRL*GI*CLSGSLHLVI*VASNAVFRVAKHT 667 CCN+ +S RQVM GLA RC FN HEIPTLYKI*Q*IKG *GWANFGLLS FGS C+L+ +H*KEAHAS +T+ L+SL RS** *MG* + +R +HR+RL* *C+ G HL I* A+ +FR A+ + Subject 5602 CCNH*KSLRQVMPGLAARCCFNLHEIPTLYKI*Q*IKGG*GWANFGLLSARCFGSLCTLHAIH*KEAHASIETQLLYSLRQRS**AK*MG*GKRFHRCMHRVRL*SF*CIPGPFHLGI*TANYEIFRTARRS 5997
Range 10: 5341 to 5553 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.9 bits(227) | 0.0 | 46/71(65%) | 0/71(0%) | Plus/Plus |
Query 11 IKQCL*KI*KHLP*T*G**FHHFFNGCPEAFKVFKATSGGCEAKACKALWKVSA*HIFVKSSIEC*PQCQY 223 IKQCL* *KHL *T G * H+ FNG P+ +VFKAT G CEAKACKALW++ A*H ++S I+C*PQC Y Subject 5341 IKQCL*TF*KHLS*TQGQ*LHYLFNGRPKTPEVFKATGGSCEAKACKALWEIPA*HFPIESPIKC*PQC*Y 5553
Grapevine rupestris stem pitting associated virus isolate VF1, partial genome
Sequence ID: KT948710.1 Length: 8716 Number of Matches: 10
Range 1: 5333 to 5989 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
489.1 bits(1061) | 0.0 | 210/219(96%) | 0/219(0%) | Plus/Plus |
Query 3 GELLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVNMFNEAVQEFEXXXXXXXXXTIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVKARNFTGICTESDYEAFDASQDHFILSFELQVMRFLGLP 659 GE LSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPL+ASHN NMF+EAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWV+AR+FTG+CTESDYEAFDASQDHFIL+FELQ+MRFLGLP Subject 5333 GEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLSASHNTNMFHEAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVRARDFTGVCTESDYEAFDASQDHFILAFELQIMRFLGLP 5989
Range 2: 5620 to 5901 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
196.3 bits(422) | 0.0 | 85/94(90%) | 0/94(0%) | Minus/Minus |
Query 290 VQMPVKFRALTHSLSSSRPLPE*M*KFGFKACMSFFSMYLI*GAKRTKTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE* 571 V PVK ALTHS SSSRPLPE*M*K GF ACMSFFSMYL+*GAKRTKTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSS+QSRHDLPE* Subject 5620 VHTPVKSLALTHSFSSSRPLPE*M*KLGFNACMSFFSMYLM*GAKRTKTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSNQSRHDLPE* 5901
Range 3: 5371 to 5541 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.9 bits(275) | 0.0 | 53/57(93%) | 0/57(0%) | Minus/Minus |
Query 41 WLAFNGTFDKNVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*M 211 WLA NGTFD+ VSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKV+ESLPLCLG*M Subject 5371 WLALNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVIESLPLCLG*M 5541
Range 4: 5941 to 5988 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
28.6 bits(56) | 0.0 | 10/16(62%) | 0/16(0%) | Minus/Minus |
Query 611 GNPKNRITCNSNDKMK 658 G+PKN + C+SN KMK Subject 5941 GSPKNLMICSSNAKMK 5988
Range 5: 5337 to 5990 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
285.2 bits(616) | 0.0 | 142/218(65%) | 0/218(0%) | Plus/Plus |
Query 7 SY*AMLVKDLKAFTLDIRVMIPSLF*WLSGSV*SFQSHKWRLRS*GVQSLMESFCLTHFCQKFH*MLATMSICSMRQFRSLKPKRLAKVLQL*RIIQAGHVGIGY*MSL*FS*NPNIVQNLTID*G*LRLGKLWPAFNMQFWFVLLLI*GTLKRSSCKL*NRIFTFTLVKVLMNLMNGLKRETLQAFAQNQIMRHLMPLRITSSCHLSCK*CGF*GCQ 660 S *AMLV L+AF LDIR M S F*W SG+ *S QSH+W+LRS*GVQSLM + CLT QK H*+LAT+ ICSMRQFRSLK +R AKVLQ +I QAGHVGIG *M L* S*NPNI QNLTID*G RLG+LWPAF+ FWF L L * TLKRSSCK *N TFT KVL + MNGL +E Q +AQ++ M+ LM R SS HL+CK F* CQ Subject 5337 SN*AMLVNVLRAFILDIRAMTLSPF*WPSGNA*SSQSHRWKLRS*GVQSLMGNSCLTPSYQKSH*VLATIPICSMRQFRSLKQRRRAKVLQPLKITQAGHVGIGC*MLL*SS*NPNIAQNLTID*GWPRLGRLWPAFSTPFWFALHLT*DTLKRSSCKR*NPTSTFTQAKVLTS*MNGLGQEISQVYAQSRTMKLLMHPRTISSWHLNCKS*DF*DCQ 5990
Range 6: 5340 to 5957 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
276.9 bits(598) | 0.0 | 130/206(63%) | 0/206(0%) | Minus/Minus |
Query 10 QMTR*SDPERHQMPHNLILCKCL*SFAL*PIH*VHQDLYQSECKNSVLKLA*ASFQCTSYKEQNEPKLHVESRPKFAQP*LPLIYCQILYNVGIS*KLKRHLVANPDMTCLNDSL*LQHFC*PFWLQTPELPH*TY*HCG*HSMELLTKMCQAETFHKALHALASQPPLVALKTLNASGQPLKK*WNHYPYV*GKCFQIFHKHCLI 627 QM R*+ P HQ H+ LC L*+ *PIH QDL SEC++ V LA*ASFQC S K Q+EPK ESRPK AQP PLIYCQIL NVGIS*+LK+HL NPDMTCL+D LQHFC P LQTPELPH TY +CG*H M LL CQA HKALHALASQ P VAL+T + SG+P K+* +H PYV* KC Q HKHC I Subject 5340 QMPR*NGPGMHQKLHSPTLCIHL*NLLP*PIHLARQDLCLSECRSWVSTLA*ASFQCISCKVQSEPKRRAESRPKSAQPWPPLIYCQILCNVGIS*RLKQHLATNPDMTCLSDFQWLQHFCSPSLLQTPELPHGTYWYCG*HLMGLLIGRCQAGISHKALHALASQLPPVALRTSSVSGRPSKR**SHCPYV*DKCSQNVHKHCSI 5957
Range 7: 5471 to 5989 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
249.0 bits(537) | 0.0 | 113/173(65%) | 0/173(0%) | Minus/Minus |
Query 141 WQP*KPHYLQLK*QDEVILRGIKCLII*FCANACKVSRFNPFIKFIKTFTRVNVKIRF*SLHELLFNVPHIRSKTNQNCMLKAGQSLPSLSYP*SIVKFCTMLGFHEN*SDI**PIPT*PA*MILYSCSTFASLFGFKLLNCLIEHIDIVASIQWNF*QKCVKQKLSIRLCTP 659 WQ *K H LQ K QDE++L IK I+ CA C++S NPFI +KTF VNV++ F LHELLFNV H+R K NQN +LKAGQSLPSL +P*SIVKFC MLGFHE+*S+I* PIPT*PA*+I CSTFA L FKLLNCL+EHI IVAS W+F* + VKQ+ IRLCTP Subject 5471 WQS*KSHDLQFKCQDEMVLGCIKSFIVRLCAYTCEISCPNPFI*LVKTFA*VNVEVGFQRLHELLFNVSHVRCKANQNGVLKAGQSLPSLGHP*SIVKFCAMLGFHED*SNI*QPIPT*PA*VIFNGCSTFARLLCFKLLNCLMEHIGIVAST*WDF**EGVKQEFPIRLCTP 5989
Range 8: 5345 to 5425 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
45.5 bits(93) | 0.0 | 18/27(67%) | 0/27(0%) | Minus/Minus |
Query 15 PDSH*KSDGIITLMSRVNAFKSFTSIA 95 PD H K D +I LMSR+NA K+FTSIA Subject 5345 PDGHQKGDRVIALMSRINALKTFTSIA 5425
Range 9: 5602 to 5997 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
178.4 bits(383) | 0.0 | 79/132(60%) | 0/132(0%) | Plus/Plus |
Query 272 CCNYRESFRQVMSGLATRCRFNFHEIPTLYKI*Q*IKGS*GWANFGLLSTCSFGSFCSLYEVH*KEAHASFKTEFLHSLW*RS**T**MG*SAKLYRHLHRIRL*GI*CLSGSLHLVI*VASNAVFRVAKHT 667 CCN+ +S RQVMSGL RC FN HEIPTL+KI*Q*IKG GWA+FGLLS FGS C+L+E+H*KEAHAS +T+ LHSL RS* *MG* + +R +HR+ L* *C+ G HL I* A++ +FR A+ + Subject 5602 CCNH*KSLRQVMSGLVARCCFNLHEIPTLHKI*Q*IKGGQGWADFGLLSARRFGSLCTLHEIH*KEAHASVETQLLHSLRQRS*RAK*MG*GKRFHRCMHRVGL*SF*CIPGPFHLGI*TANHEIFRTARRS 5997
Range 10: 5341 to 5553 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.0 bits(225) | 0.0 | 45/71(63%) | 0/71(0%) | Plus/Plus |
Query 11 IKQCL*KI*KHLP*T*G**FHHFFNGCPEAFKVFKATSGGCEAKACKALWKVSA*HIFVKSSIEC*PQCQY 223 I+QCL* *+HL *T*G * +H F+G PE +V KAT G CEAKACKALW++ A*H+ +KS I+C*PQ QY Subject 5341 IEQCL*TF*EHLS*T*GQ*LYHLFDGRPETLEVLKATGGSCEAKACKALWEIPA*HLPIKSPIKC*PQYQY 5553
Rupestris stem pitting associated virus isolate RSPaV PN, complete genome
Sequence ID: AY368172.2 Length: 8743 Number of Matches: 10
Range 1: 5332 to 5988 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
488.1 bits(1059) | 0.0 | 209/219(95%) | 0/219(0%) | Plus/Plus |
Query 3 GELLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVNMFNEAVQEFEXXXXXXXXXTIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVKARNFTGICTESDYEAFDASQDHFILSFELQVMRFLGLP 659 GE LSNACERFESIYPRHKGNDS+TFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLD FLSKVPLNA HNVNMF+EAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRL+VAKAGQTLACFQHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVKAR FTG+CTESDYEAFDASQDHFIL+FELQ+MRFLGLP Subject 5332 GEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDAFLSKVPLNAGHNVNMFHEAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLKVAKAGQTLACFQHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVKARGFTGVCTESDYEAFDASQDHFILAFELQIMRFLGLP 5988
Range 2: 5622 to 5900 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
185.3 bits(398) | 0.0 | 79/93(85%) | 0/93(0%) | Minus/Minus |
Query 293 VQMPVKFRALTHSLSSSRPLPE*M*KFGFKACMSFFSMYLI*GAKRTKTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE 571 VQ PVK A THS SSSRPLPE*M*K GF AC+SFFS+YL+*GAKRT+TAC*KQAKVCPALAT NLLSNFVQCWDFMKIKATSS+QS HDLPE Subject 5622 VQTPVKPLAFTHSFSSSRPLPE*M*KLGFNACISFFSIYLM*GAKRTRTAC*KQAKVCPALATFNLLSNFVQCWDFMKIKATSSNQSLHDLPE 5900
Range 3: 5370 to 5540 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
117.5 bits(250) | 0.0 | 48/57(84%) | 0/57(0%) | Minus/Minus |
Query 41 WLAFNGTFDKNVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*M 211 W AF GTFDKN SS+NFP*GFARL+FAASTCG ENFKRFRTAIK V ES PLCLG*M Subject 5370 WPAFKGTFDKNASSKNFP*GFARLNFAASTCGLENFKRFRTAIKNVTESFPLCLG*M 5540
Range 4: 5937 to 5987 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
28.6 bits(56) | 0.0 | 11/17(65%) | 0/17(0%) | Minus/Minus |
Query 608 GNPKNRITCNSNDKMK* 658 G PKN I C+SN +MK* Subject 5937 GKPKNLIICSSNARMK* 5987
Range 5: 5336 to 5989 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
265.0 bits(572) | 0.0 | 135/218(62%) | 0/218(0%) | Plus/Plus |
Query 7 SY*AMLVKDLKAFTLDIRVMIPSLF*WLSGSV*SFQSHKWRLRS*GVQSLMESFCLTHFCQKFH*MLATMSICSMRQFRSLKPKRLAKVLQL*RIIQAGHVGIGY*MSL*FS*NPNIVQNLTID*G*LRLGKLWPAFNMQFWFVLLLI*GTLKRSSCKL*NRIFTFTLVKVLMNLMNGLKRETLQAFAQNQIMRHLMPLRITSSCHLSCK*CGF*GCQ 660 S *AMLVKDL+AFTL IR MI S *W S SV*+F SHK + +S*GVQ+LME+FCLTH CQ++ *MLATMS C MRQF+SLK +RLA+V *+ QAGH IGY* L* S*NPNI Q+LTID* LRLGKLWP FNM W *G LKR+ CK *+ FTF K MN M+G K E LQ FAQ+Q M+ LM LRI S L+CK GF CQ Subject 5336 SS*AMLVKDLRAFTLGIREMILSHS*WQSESV*NFLSHKLKRQS*GVQNLMENFCLTHSCQRYL*MLATMSTCFMRQFKSLKQRRLARVQLP*KTTQAGHAEIGY*T*L*SS*NPNIAQSLTID*RWLRLGKLWPVFNMLSWSASRPT*GILKRNLCKH*SLTFTFIQAKASMN*MSG*KLEVLQVFAQSQTMKPLMRLRIISFWRLNCKL*GFWVCQ 5989
Range 6: 5470 to 5988 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
243.0 bits(524) | 0.0 | 106/173(61%) | 0/173(0%) | Minus/Minus |
Query 141 WQP*KPHYLQLK*QDEVILRGIKCLII*FCANACKVSRFNPFIKFIKTFTRVNVKIRF*SLHELLFNVPHIRSKTNQNCMLKAGQSLPSLSYP*SIVKFCTMLGFHEN*SDI**PIPT*PA*MILYSCSTFASLFGFKLLNCLIEHIDIVASIQWNF*QKCVKQKLSIRLCTP 659 WQ KPH LQ K Q+E+ILR IK I+* CAN CK S F+P I+FI+ F +NVK+R LH+ LFN+PH+ + +Q+ MLK GQSLPSLS+ *SIVK C MLGFHE+ S +**PI *PA*++ Y T ASL FKLLNCL++H+DIVASIQ *Q+CVKQK SIR CTP Subject 5470 WQTQKPHNLQFKRQNEMILRRIKGFIV*LCANTCKTSSFHPLIQFIEAFA*MNVKVRLQCLHKFLFNIPHVGREADQDSMLKTGQSLPSLSHL*SIVKLCAMLGFHEDQSYV**PISA*PA*VVFYGSCTLASLLCFKLLNCLMKHVDIVASIQRYL*QECVKQKFSIRFCTP 5988
Range 7: 5344 to 5421 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.0 bits(81) | 0.0 | 18/26(69%) | 0/26(0%) | Minus/Minus |
Query 15 DSH*KSDGIITLMSRVNAFKSFTSIA 92 D H + D II+LM RVNA KSFTSIA Subject 5344 DCHQECDRIISLMPRVNALKSFTSIA 5421
Range 8: 5345 to 5956 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
244.4 bits(527) | 0.0 | 119/204(58%) | 0/204(0%) | Minus/Minus |
Query 16 QMTR*SDPERHQMPHNLILCKCL*SFAL*PIH*VHQDLYQSECKNSVLKLA*ASFQCTSYKEQNEPKLHVESRPKFAQP*LPLIYCQILYNVGIS*KLKRHLVANPDMTCLNDSL*LQHFC*PFWLQTPELPH*TY*HCG*HSMELLTKMCQAETFHKALHALASQPPLVALKTLNASGQPLKK*WNHYPYV*GKCFQIFHKHC 627 Q *+DPE HQ H+L LCK L*+ L P H VH+ L +ECK+ LA* SFQ TS + ++ P HVE+RPKFAQP* PLIYCQ L NVGIS*+ K LV N MTCL+ L H C*P LQT ELPH T *HCG HS LT+M QA+ FHK LHA LVA K LNA G P + * NH+PY *GKC QIFHKHC Subject 5345 QTPE*NDPETHQRLHSLTLCKHL*NL*LSPTHSVHRGLCLNECKS*ASMLA*VSFQYTSCRARSGPGQHVENRPKFAQP*PPLIYCQTLCNVGIS*RSKLRLVTNLCMTCLSGFLW*LHSC*PSLLQTLELPHETC*HCGQHSKVPLTRMRQAKIFHKVLHASTLPLQLVA*KILNAFGLPSRM*QNHFPYA*GKCSQIFHKHC 5956
Range 9: 5601 to 5996 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
146.3 bits(313) | 0.0 | 71/132(54%) | 0/132(0%) | Plus/Plus |
Query 272 CCNYRESFRQVMSGLATRCRFNFHEIPTLYKI*Q*IKGS*GWANFGLLSTCSFGSFCSLYEVH*KEAHASFKTEFLHSLW*RS**T**MG*SAKLYRHLHRIRL*GI*CLSGSLHLVI*VASNAVFRVAKHT 667 C +R+ RQVM L TR F+ HEIPTL+K+*Q*IKG *GWANFGL STC G +L+EV+*KE +AS + LHS R *T *+G S + YR LHR+RL* +*C+SGS H +* A+ VF A+ + Subject 5601 CSYHRKPLRQVMQRLVTRRSFDLHEIPTLHKV*Q*IKGG*GWANFGLFSTCCPGPLRALHEVY*KETYASIEA*LLHSFRQRPR*TE*VGES*RFYRCLHRVRL*SL*CVSGSFHSGV*TANYEVFGFARRS 5996
Range 10: 5340 to 5552 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
97.7 bits(207) | 0.0 | 42/71(59%) | 0/71(0%) | Plus/Plus |
Query 11 IKQCL*KI*KHLP*T*G**FHHFFNGCPEAFKVFKATSGGCEAKACKALWKVSA*HIFVKSSIEC*PQCQY 223 ++QCL*KI*+HLP* *G *F H +G P+AFK+F ATS + +ACK LWK+ A* I VK + EC PQCQ+ Subject 5340 VEQCL*KI*EHLP*A*GK*FCHILDGSPKAFKIF*ATS*SGKVEACKTLWKIFA*RILVKGTFECWPQCQH 5552
Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome
Sequence ID: JX559646.1 Length: 8726 Number of Matches: 11
Range 1: 5332 to 5988 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
486.3 bits(1055) | 0.0 | 208/219(95%) | 0/219(0%) | Plus/Plus |
Query 3 GELLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVNMFNEAVQEFEXXXXXXXXXTIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVKARNFTGICTESDYEAFDASQDHFILSFELQVMRFLGLP 659 GE LSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLD+FLSKVPLNA+HN NMFNEAV+EFE KKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWV+AR FTGICTESDYEAFDASQDHFIL+FELQ+M+FLGLP Subject 5332 GEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKVPLNANHNSNMFNEAVREFEEKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVRARGFTGICTESDYEAFDASQDHFILAFELQIMKFLGLP 5988
Range 2: 5622 to 5900 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
173.4 bits(372) | 0.0 | 74/93(80%) | 0/93(0%) | Minus/Minus |
Query 293 VQMPVKFRALTHSLSSSRPLPE*M*KFGFKACMSFFSMYLI*GAKRTKTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE 571 VQMPV ALTHS +SSRPLPE M*K GF+AC+SFFSMYL+*GAKRT+TAC*KQA+VCPALATL+LLSN VQC DFMK++ATS+SQS HDLPE Subject 5622 VQMPVNPLALTHSFNSSRPLPEWM*KLGFRACISFFSMYLM*GAKRTRTAC*KQARVCPALATLSLLSNLVQCCDFMKMRATSNSQSLHDLPE 5900
Range 3: 5370 to 5537 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.0 bits(214) | 0.0 | 42/56(75%) | 0/56(0%) | Minus/Minus |
Query 41 LAFNGTFDKNVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*M 208 LAF+GT D+ SS+NFP GFARLS AAST GFENF+RFRTA++ VMES PLCLG*M Subject 5370 LAFSGTLDRKESSKNFPYGFARLSLAASTWGFENFRRFRTAMRNVMESFPLCLG*M 5537
Range 4: 5940 to 5987 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
30.9 bits(61) | 0.0 | 11/16(69%) | 0/16(0%) | Minus/Minus |
Query 611 GNPKNRITCNSNDKMK 658 GNPKN I CNSN ++K Subject 5940 GNPKNFIICNSNARIK 5987
Range 5: 5470 to 5976 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
188.0 bits(404) | 0.0 | 88/169(52%) | 0/169(0%) | Minus/Minus |
Query 141 KPHYLQLK*QDEVILRGIKCLII*FCANACKVSRFNPFIKFIKTFTRVNVKIRF*SLHELLFNVPHIRSKTNQNCMLKAGQSLPSLSYP*SIVKFCTMLGFHEN*SDI**PIPT*PA*MILYSCSTFASLFGFKLLNCLIEHIDIVASIQWNF*QKCVKQKLSIRLCTP 647 K HYLQL+ D+V+L GIK ++*FCANA + S +P ++ I FT ++V++ *SLH+LL +V H+R K +QN +LKA + LPS SYP IVKF TML HEN S+I PIPT*PA*M+LYS T F +L +CLIEHI IV I WN Q+ ++ +L I C P Subject 5470 KLHYLQLEC*DKVVLGGIKGFVV*FCANASEPSSSDPLVQLI*AFT*MDVEVGL*SLHQLLLDVSHVRCKADQNSVLKASKGLPSFSYPKPIVKFGTMLRLHENESNIQQPIPT*PA*MVLYSRCTLTGFFFLELPHCLIEHIGIVIGI*WNLRQERIQ*ELPIWFCPP 5976
Range 6: 5330 to 5446 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
55.1 bits(114) | 0.0 | 22/39(56%) | 0/39(0%) | Minus/Minus |
Query 1 ALKTLNASGQPLKK*WNHYPYV*GKCFQIFHKHCLITHQ 117 ALK L+A QP WNH+ Y GKCFQIFH H + HQ Subject 5330 ALKILDAFEQP*GMLWNHFLYALGKCFQIFHMHYSVAHQ 5446
Range 7: 5330 to 5986 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
189.8 bits(408) | 0.0 | 113/219(52%) | 0/219(0%) | Plus/Plus |
Query 1 LVSY*AMLVKDLKAFTLDIRVMIPSLF*WLSGSV*SFQSHKWRLRS*GVQSLMESFCLTHFCQKFH*MLATMSICSMRQFRSLKPKRLAKVLQL*RIIQAGHVGIGY*MSL*FS*NPNIVQNLTID*G*LRLGKLWPAFNMQFWFVLLLI*GTLKRSSCKL*NRIFTFTLVKVLMNLMNGLKRETLQAFAQNQIMRHLMPLRITSSCHLSCK*CGF*GC 657 LVS * M VKDLKAFT I+ MIP WL SV*+FQS + + +*G Q+ M S C +FH*M T+ ICSMRQ S + K+ +V +L*R IQAGHVGIG M L FS*+ +IV NLTI G*L+LGK AFN FW L L * T +RS CKL*+ T VK M+ +G + E AFAQNQ + LMP R T S H SC+* F C Subject 5330 LVSN*VMHVKDLKAFTQGIKEMIP*HSSWLFESV*NFQSPRLKQPN*GGQNHMGSSYWILSCLRFH*MPITIPICSMRQCGSSRKKKPVRVQRL*RTIQAGHVGIGCWMLLSFS*SRSIVPNLTIGLG*LKLGKPLLAFNTLFWSALHLT*DTSRRS*CKL*SPTSTSIQVKA*MS*TSGSELEGSLAFAQNQTTKPLMPPRTTLS*HSSCR**SFWDC 5986
Range 8: 5601 to 5987 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.6 bits(283) | 0.0 | 68/129(53%) | 0/129(0%) | Plus/Plus |
Query 272 CCNYRESFRQVMSGLATRCRFNFHEIPTLYKI*Q*IKGS*GWANFGLLSTCSFGSFCSLYEVH*KEAHASFKTEFLHSLW*RS**T**MG*SAKLYRHLHRIRL*GI*CLSGSLHLVI*VASNAVFRVA 658 C +YRE FRQVM GLA C +FHE+ LY+I*Q* GS* WAN LLST G C+L+E+H +EA AS K + LH *R * +G S +++ HLHRIRL +*CL G L+ I VA N VF +A Subject 5601 CSDYREPFRQVM*GLAVGCCSHFHEVAALYQI*Q*A*GS*SWANPCLLSTRCSGPLCTLHEIHREEADASSKAQLLHPFR*RPR*VERVGQS*RVHWHLHRIRLRSL*CLPGPLYPSIRVADNEVFGIA 5987
Range 9: 5331 to 5552 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
62.9 bits(131) | 0.0 | 32/74(43%) | 0/74(0%) | Plus/Plus |
Query 2 W*VIKQCL*KI*KHLP*T*G**FHHFFNGCPEAFKVFKATSGGCEAKACKALWKVSA*HIFVKSSIEC*PQCQY 223 W* + C+*KI*KHLP * *FH+ +GC +A K+FKA + +A K +W+V V S +C Q QY Subject 5331 W*ATE*CM*KI*KHLPKA*RK*FHNIPHGCSKASKIFKAPG*SSQTEAGKTIWEVLTGFFPV*GSTKCQSQFQY 5552
Range 10: 5471 to 5956 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
148.2 bits(317) | 0.0 | 79/162(49%) | 0/162(0%) | Minus/Minus |
Query 142 QMTR*SDPERHQMPHNLILCKCL*SFAL*PIH*VHQDLYQSECKNSVLKLA*ASFQCTSYKEQNEPKLHVESRPKFAQP*LPLIYCQILYNVGIS*KLKRHLVANPDMTCLNDSL*LQHFC*PFWLQTPELPH*TY*HCG*HSMELLTKMCQAETFHKALHA 627 +M *S P RHQ +LILCKC *+ L*P H LY + C++ L+LA AS +C S K Q+ P+ VES+ FAQ *LP YCQI YN S*K ++H ANP MTCLN SL* H F+ +TP LPH*TY +C H +E T T H L A Subject 5471 RMLG*SGPGRHQRLRSLILCKCQ*TL*L*PTRSTHLGLYLNGCRSWALELASASSRCISCKVQSGPEQRVESKQGFAQL*LP*AYCQIWYNAATS*K*EQHPTANPYMTCLNGSL*SLHSYWLFFPRTPALPH*TYWNCDWHLVEP*TGKNPVRTSHMVLPA 5956
Nucleotide Sequence (1353 letters)
Query ID: | ds2016-132_4 |
Query definition: | No definition line |
Query length: | 951 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
1072.8 | 5645.0 | 38% | 0 | 89% | KX274275.1 | |
1066.4 | 5304.2 | 41% | 0 | 86% | AY368590.1 | |
1036.6 | 4421.7 | 35% | 0 | 42% | KR528585.1 | |
1017.4 | 3374.2 | 37% | 0 | 48% | KT948710.1 | |
1023.8 | 3431.0 | 40% | 0 | 48% | KR054734.1 |
Alignments
Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome
Sequence ID: KX274275.1 Length: 8724 Number of Matches: 11
Range 1: 3310 to 4659 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1072.8 bits(2335) | 0.0 | 448/450(100%) | 0/450(0%) | Minus/Plus |
Query 3 VGFLLSTDGLALKAGIRSFVESESPVDPALSSPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGSGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAI 1352 VGFLLSTDGLALKAGIRSFVESESPVDPALS PTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIG+GPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAI Subject 3310 VGFLLSTDGLALKAGIRSFVESESPVDPALSGPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAI 4659
Range 2: 3310 to 4254 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
715.4 bits(1555) | 0.0 | 297/315(94%) | 0/315(0%) | Plus/Minus |
Query 408 IHF*VPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSSKCTKHNCQFSLLDVRS*HSSKPRL*IVKFLITYHASQTSQQAPLKFFRPFKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPATNLLDMPNVFIRYVKQSRYAPAWINNLNLAIDITFGADVESLKSFCQIHHIQTPPLT*LFKDVIGAWPT*VIEHVHLTPSKC*CNGCNHATIKRGTRLKMI*L*TQNST*RPLIFPKLPAHLIFRCYNDQSHMVPNAE*GNHFIFCISIFTKLLPYGWARKSWINW*FTFHERPYSCLQSQTVGAEKKAN 1352 IHF*VPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSS KCTKHNCQFSL DVRS*HSSKPRL*IVKFLITYHASQTSQQAPLKFFRP KTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRP TNL DMPNVFIRYVKQSRYAPAWINNLN +IDITFG DVESLKSF QIHHIQTPPLT*LFK+VIGAWPT +IEHV+LTPSKC*CNGCNHA IKRGTRLKMI*L TQNST*RPLIFPKLPAHLIF CYN+QSHMVPNAE*GNHFIFC+SIFTKLLPYGWARKSWINW*FTFHERPYSCLQSQTVGAEKKAN Subject 3310 IHF*VPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCTKHNCQFSLFDVRS*HSSKPRL*IVKFLITYHASQTSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPVTNLFDMPNVFIRYVKQSRYAPAWINNLNFSIDITFGTDVESLKSFRQIHHIQTPPLT*LFKNVIGAWPTQIIEHVYLTPSKC*CNGCNHAAIKRGTRLKMI*LQTQNST*RPLIFPKLPAHLIFWCYNNQSHMVPNAE*GNHFIFCVSIFTKLLPYGWARKSWINW*FTFHERPYSCLQSQTVGAEKKAN 4254
Range 3: 4300 to 4659 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
250.8 bits(541) | 0.0 | 109/120(91%) | 0/120(0%) | Plus/Minus |
Query 3 NGVISKSGSHGALFEVTG*S*IKHRIYKPPALQVVPI*LSFKQPQYIALFSTQNSSIFLRIICALTRVTSKRDESVTANNKKT*IDVTRRE*LNFIKDHAMTSL*ACNFPEEDFKGNDIP 362 NGVISKSGSHGA FEVTG*S*IKH IYKP ALQVVPI*LSF+QPQY+ LF TQNSSIFLRIICALTR+TSKRDESVTA+NKKT*IDVTRRE*LNFIKDHAMTSL*ACNFP+EDFKGN+IP Subject 4300 NGVISKSGSHGAFFEVTG*S*IKHWIYKPSALQVVPI*LSFEQPQYVTLFGTQNSSIFLRIICALTRITSKRDESVTADNKKT*IDVTRRE*LNFIKDHAMTSL*ACNFPKEDFKGNNIP 4659
Range 4: 3309 to 4661 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
942.7 bits(2051) | 0.0 | 446/451(99%) | 0/451(0%) | Plus/Minus |
Query 1 KMA*SAKAAVMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSNLNISLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHXXXXXXXXXXEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVRPPNKHP*SFSALSKLGKYVIFDPFRESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQMXXXXXXXXXYIIFRPPP*HSSSKM*LVLGLHK*LSTSTSRLPSADAMAVIMQPLRGAQG*K*FDFKHKIPHRGHSFSPNFQLTSYSGVIMISLTWCLTQNKXXXXXXXXXXXPSCFRMVGLERAGSTGDSLSTNDLIPAFKAKPSVLRRKPT 1353 KMA*SAKAAVMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSNLN+SLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHSSSISRSLLIEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPV+PP+KHP*SFSALSKLGKYVIFDPFRESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQMSKASKASAKYIIFRPPP*HSSSKM*LVLGLHK*LSTSTSRLPSADAMAVIMQPLRGAQG*K*FDFKHKIPHRGHSFSPNFQLTSYSGVI+ISLTWCLTQNKAIISFSA*AFSPSCFRMVG ERAGSTGDSLSTNDLIPAFKAKPSVLRRKPT Subject 3309 KMA*SAKAAVMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSNLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHSSSISRSLLIEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSALSKLGKYVIFDPFRESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQMSKASKASAKYIIFRPPP*HSSSKM*LVLGLHK*LSTSTSRLPSADAMAVIMQPLRGAQG*K*FDFKHKIPHRGHSFSPNFQLTSYSGVIIISLTWCLTQNKAIISFSA*AFSPSCFRMVGPERAGSTGDSLSTNDLIPAFKAKPSVLRRKPT 4661
Range 5: 3309 to 4238 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
678.8 bits(1475) | 0.0 | 290/310(94%) | 0/310(0%) | Minus/Plus |
Query 424 SWLSSQHRRFGFEGRNKVVRGK*ITS*SSSFEPNHTEATW*KCLCRK*NDCLILR*APCETDHYNTGI*GELEVWGK*VASMWNFVFKVKSFSTLCPS*WLHDYSHCISTWKA*GGRAQLLM*AKHQSHL*RAMSRGGSEYDVFGRSF*GFRHLRQM*CQWRD*GY*SRRAHICSV*HNE*TH*ACREDW*RASKYKGG*AAKS*TISS*PAFSERVKDNIFSKF*KGGKTSGVLVGRSDWRDK**EI*RFKALACWSVNF*HQAKRIDSCAWYIWSWKEFPIQELHEEI*RKICNICLT*AGSSKFNQK 1353 SWLSSQHRRFGFEGRNKVVRGK*ITS*SSSF PNHTEATW*KCL RK*NDCLILR*APCETD+YNT I*GELEVWGK*VASMWNFVF+VKSFS LCPS*WLHDYSHCISTWKA*G RAQL +*AKHQSH *RAMS GGSEYDVFG SF*GFRHL QM*CQWR+*GY*SRRAHICSV*HNE*TH*ACR+DW*RASKYKGG*AAKS*TISS*PAFSERVKDNIFSKF*+GGKTSGVL GR DWRDK**EI*RFKALACWSVNF*HQ KRIDSCAWYIW WKEFPIQELHEEI*RKICNICLT*AGSSKFNQK Subject 3309 SWLSSQHRRFGFEGRNKVVRGK*ITS*SSSFGPNHTEATW*KCLRRK*NDCLILR*APCETDYYNTRI*GELEVWGK*VASMWNFVFEVKSFSALCPS*WLHDYSHCISTWKA*GRRAQLFV*AKHQSHF*RAMSGGGSEYDVFGGSF*GFRHLCQM*CQWRN*GY*SRRAHICSV*HNE*TH*ACRKDW*RASKYKGG*AAKS*TISS*PAFSERVKDNIFSKF*EGGKTSGVLAGRFDWRDK**EI*RFKALACWSVNF*HQTKRIDSCAWYIWGWKEFPIQELHEEI*RKICNICLT*AGSSKFNQK 4238
Range 6: 4305 to 4661 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
244.4 bits(527) | 0.0 | 108/119(91%) | 0/119(0%) | Minus/Plus |
Query 1 CRYL*SLPQESYRPKGWSLRDL**SSAIPSWLHRSMSSCYSQ*RFHLSCW*PLSKHI*FSKR*SYFGC*TERYIEVA*RKVI*VQLGEPEVCKSDV*FKITL*LQKGLHDCRFC*LRHF 357 C YL*SLP ESYRPKGWSLRDL**SSAIPSWLHRSMSSCY Q*RFHLSCW* LSKHI*FSKR*SYFGC TE +IEVA RKVI*VQLGEP+VCKS+V*FKITL*LQK LHDCRFC*LRHF Subject 4305 CCYL*SLP*ESYRPKGWSLRDL**SSAIPSWLHRSMSSCYPQ*RFHLSCW*SLSKHI*FSKR*SYFGCRTE*HIEVARRKVI*VQLGEPKVCKSNV*FKITL*LQKRLHDCRFC*LRHF 4661
Range 7: 3311 to 4318 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
685.6 bits(1490) | 0.0 | 313/336(93%) | 0/336(0%) | Plus/Minus |
Query 344 QR*RHXXXXXXXXXXXXXYTLHPFLGPF*LNLLEPA*VRQMLQIFLQIXXXXXCIGNSFQLQMYQAQLSILFA*CQKLTLQQAKALNR*ISHHLSRQSDLPTSTPEVFPPFQNLENMLSLTRSEKAGQELIV*LFAAHPPLYFEARYQSSRHA*CVHSLCQTEQICARLD**PQSRH*HHIWRRCRKPQKLLPNTSYSDPPLDIALQRCDWCLAYISN*ARPPHAFQVLMQWL*SCNH*EGHKVENDLTLNTKFHIEATHFPQTSSSPHIPVL**SVSHGA*RRIRQSFHFLHKHFHQVASVWLGSKELDQLVIHFPRTTLFLPSKPNRRC*EESQ 1351 QR*+HPSPPSLIC PSPPYTLHPFLGPF*LNLLEPA*VRQMLQIFLQISS*SSCIGNSFQ QMYQAQLSILF *CQKLTLQQAKALNR*ISHHLSRQS+LP STPEVFPP QNLENMLSLTRSEKAGQELIV*LFAAHPPLYFEARYQS RHA*CVHSLCQTEQICARLD**PQ H*HHIW RCRKPQKL PNTSYSDPP DIALQ+CDWCLAY +N*AR PHAFQVLMQWL*SC+H*EGHK ENDLT NTKFHIEATHFPQTSSSPHI VL**SVSHGA*RRIRQSFHFL KHFHQVASVWLG KELDQLVIHFPRTTLFLPSKPNRRC*EESQ Subject 3311 QR*QHPSPPSLICLPSPPYTLHPFLGPF*LNLLEPA*VRQMLQIFLQISS*SSCIGNSFQPQMYQAQLSILFV*CQKLTLQQAKALNR*ISHHLSRQSNLPASTPEVFPPSQNLENMLSLTRSEKAGQELIV*LFAAHPPLYFEARYQSFRHA*CVHSLCQTEQICARLD**PQFLH*HHIWHRCRKPQKLPPNTSYSDPPPDIALQKCDWCLAYTNN*ARLPHAFQVLMQWL*SCSH*EGHKAENDLTSNTKFHIEATHFPQTSSSPHILVL**SVSHGA*RRIRQSFHFLRKHFHQVASVWLGPKELDQLVIHFPRTTLFLPSKPNRRC*EESQ 4318
Range 8: 4349 to 4660 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
231.1 bits(498) | 0.0 | 95/104(91%) | 0/104(0%) | Plus/Minus |
Query 2 KWRNQQKRQSWSPF*SYRVILNQTSDLQTSGSPSCTYMTFLQATSIYRSVQHPK*LYLFENHMCFDKGHQQER*KRHCE*QEDIDRCNQEGIAELHQRSRNDQP 313 KWRNQQKRQSWS F*SYRVILNQT DLQT GSPSCTYMTFL+ATSI SV+HPK*LYLFENHMCFDK HQQER*KRHC *QEDIDRCNQEGIAELHQRSRNDQP Subject 4349 KWRNQQKRQSWSLF*SYRVILNQTLDLQTFGSPSCTYMTFLRATSICHSVRHPK*LYLFENHMCFDKDHQQER*KRHCG*QEDIDRCNQEGIAELHQRSRNDQP 4660
Range 9: 3311 to 4189 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
584.4 bits(1269) | 0.0 | 274/293(94%) | 0/293(0%) | Minus/Plus |
Query 473 LAFFSAPTVWL*RQE*GRSWKVNHQLIQLFRAQPYGSNXXXXXXXXXXXLPYSALGTM*D*SL*HRNMR*AGSLGKMSGLYVEFCV*SQIIFNLVPLLMVA*LQPLHQHLEGVRWTCSITYVGQAPITSLKSYVKGGV*I*CIWQKLLRLSTSAPNVMSMARLRLLIQAGAYLLCLT*RMNTLGMSRRLVAGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLKGRKNFRGACWEV*LA**VMRNLTIQSLGLLECQLLTSSKEN*QLCLVHLELERVSYTRAS*RDLKEN 1351 LAFFSAPTVWL*RQE*GRSWKVNHQLIQLFRAQPYGSNLVKML QKMK*LPYSALGTM*D* L*H+NMR*AGSLGKMSGLYVEFCV*SQIIF+LVPLLM A*LQPLHQHLEGVR TCSI VGQAPIT LKSYV+GGV*I*CIW+KLLRLSTS PNVMSM +LRLLIQAGAYLLCLT*RMNTLGMS+RLV GLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVL+GRKNFRGACWEV*LA**VMRNLTIQSLGLLECQLLTS+KEN*QLCLVHL LERVSYTRAS*RDLKEN Subject 3311 LAFFSAPTVWL*RQE*GRSWKVNHQLIQLFRAQPYGSNLVKMLTQKMK*LPYSALGTM*D*LL*HQNMR*AGSLGKMSGLYVEFCV*SQIIFSLVPLLMAA*LQPLHQHLEGVR*TCSIICVGQAPITFLKSYVRGGV*I*CIWRKLLRLSTSVPNVMSMEKLRLLIQAGAYLLCLT*RMNTLGMSKRLVTGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLRGRKNFRGACWEV*LA**VMRNLTIQSLGLLECQLLTSNKEN*QLCLVHLGLERVSYTRAS*RDLKEN 4189
Range 10: 4466 to 4660 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
139.0 bits(297) | 0.0 | 58/65(89%) | 0/65(0%) | Minus/Plus |
Query 2 KAHMILKKIELFWVLNRAIY*GCLKESHIGTTWRAGGL*IRCLIQDYPVTSKRAP*LPLLLITPF 196 KAHMILKKIELFWV NR Y*GC KESHIGTTWRA GL*I+CLIQDYPVTSK+AP*LPLLLITPF Subject 4466 KAHMILKKIELFWVPNRVTY*GCSKESHIGTTWRAEGL*IQCLIQDYPVTSKKAP*LPLLLITPF 4660
Range 11: 4223 to 4411 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
100.0 bits(212) | 0.0 | 60/63(95%) | 0/63(0%) | Minus/Plus |
Query 251 QIQSKGT*KWMKSVXXXXXXXXXXRAGMSLPLKSSSGKLQA*RLVIA*SLMKFSYSLLVTSIY 439 QIQSKGT*KWMKSVRW*R+ANQRRRAGM LPLKSS GKLQA*RLVIA*SLMKFSYSLLVTSIY Subject 4223 QIQSKGT*KWMKSVRW*RQANQRRRAGMLLPLKSSLGKLQA*RLVIA*SLMKFSYSLLVTSIY 4411
Rupestris stem pitting associated virus strain Syrah, complete genome
Sequence ID: AY368590.1 Length: 8742 Number of Matches: 12
Range 1: 3310 to 4659 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1066.4 bits(2321) | 0.0 | 445/450(99%) | 0/450(0%) | Minus/Plus |
Query 3 VGFLLSTDGLALKAGIRSFVESESPVDPALSSPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGSGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAI 1352 VGFLLSTDGLALKAGIRSFVESESPVDPALS+PTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIG+GPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTS IKQRELTVVLGTFGAGKSFL+KSFMKRSEGKFVTFVSPRRALANSIKRDLEMD+ECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAI Subject 3310 VGFLLSTDGLALKAGIRSFVESESPVDPALSNPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSGIKQRELTVVLGTFGAGKSFLHKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAI 4659
Range 2: 3309 to 4661 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
910.6 bits(1981) | 0.0 | 432/451(96%) | 0/451(0%) | Plus/Minus |
Query 1 KMA*SAKAAVMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSNLNISLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHXXXXXXXXXXEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVRPPNKHP*SFSALSKLGKYVIFDPFRESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQMXXXXXXXXXYIIFRPPP*HSSSKM*LVLGLHK*LSTSTSRLPSADAMAVIMQPLRGAQG*K*FDFKHKIPHRGHSFSPNFQLTSYSGVIMISLTWCLTQNKXXXXXXXXXXXPSCFRMVGLERAGSTGDSLSTNDLIPAFKAKPSVLRRKPT 1353 KMA*SAKAAVM+PFLKLQGNLESNIGFTNLRLSKLYLYDFPSS+LN+SLCSAPKIALSF*ESYVL*QGSPAREMKASLR+TRRHRSM*PGGNS TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHSSSISRSLLIEFARARLGETNVTNFPSDLFMKLL RKLFPAPNVPSTTVNSLCLM EVDTPASQGFESLNFSSLITPV+PP+KHP*SFSA SKLGKYVIFDPF+ESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMS RADMRPPGLITSISPLTSHLAQMSKAS ASAKYIIFRPPP*HSSSKM*LVLGLHK*LSTSTSRLPSADA+AVIMQPLRGAQG*K* DFKHKIPHRGHSFSPNFQLTSYSGVIMISLT CLTQNKAIISFSA*AFSPSCFR+VG ERAGSTGDSLSTNDLIPAFKA+PSVLRRKPT Subject 3309 KMA*SAKAAVMDPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSSLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRMTRRHRSM*PGGNSWTSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHSSSISRSLLIEFARARLGETNVTNFPSDLFMKLLCRKLFPAPNVPSTTVNSLCLMPEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSARSKLGKYVIFDPFKESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSKRADMRPPGLITSISPLTSHLAQMSKASNASAKYIIFRPPP*HSSSKM*LVLGLHK*LSTSTSRLPSADAIAVIMQPLRGAQG*K*LDFKHKIPHRGHSFSPNFQLTSYSGVIMISLT*CLTQNKAIISFSA*AFSPSCFRIVGFERAGSTGDSLSTNDLIPAFKARPSVLRRKPT 4661
Range 3: 3310 to 4254 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
643.5 bits(1398) | 0.0 | 273/315(87%) | 0/315(0%) | Plus/Minus |
Query 408 IHF*VPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSSKCTKHNCQFSLLDVRS*HSSKPRL*IVKFLITYHASQTSQQAPLKFFRPFKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPATNLLDMPNVFIRYVKQSRYAPAWINNLNLAIDITFGADVESLKSFCQIHHIQTPPLT*LFKDVIGAWPT*VIEHVHLTPSKC*CNGCNHATIKRGTRLKMI*L*TQNST*RPLIFPKLPAHLIFRCYNDQSHMVPNAE*GNHFIFCISIFTKLLPYGWARKSWINW*FTFHERPYSCLQSQTVGAEKKAN 1352 IHF VPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSS KC KH+CQFSL D RS HSSKPRL*IVKFLITYHAS TSQQAPLKFFRP KTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRP TNL DMPNVFIRYVK+SRYAPAWI+N N IDITF DVESLK FCQIHHIQTPPLT*LFKDVIGA PT*VIEHV+LTPSKC*CN CNHA IKRGTRLKMI L*TQNST*RP I PKLPAH IF YNDQSHM+PN E*GNHFIFCISIFTKLLPY W KSWIN *FTFH+RPYS LQS T+ A+KK N Subject 3310 IHFQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCAKHDCQFSLFDARSRHSSKPRL*IVKFLITYHAS*TSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPVTNLFDMPNVFIRYVKKSRYAPAWIDNFNFTIDITFSTDVESLKRFCQIHHIQTPPLT*LFKDVIGAGPT*VIEHVYLTPSKC*CNSCNHAAIKRGTRLKMIGL*TQNST*RPFILPKLPAHFIFWRYNDQSHMMPNTE*GNHFIFCISIFTKLLPYSWV*KSWINR*FTFHKRPYSRLQS*TICAKKKTN 4254
Range 4: 4300 to 4659 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
244.8 bits(528) | 0.0 | 106/120(88%) | 0/120(0%) | Plus/Minus |
Query 3 NGVISKSGSHGALFEVTG*S*IKHRIYKPPALQVVPI*LSFKQPQYIALFSTQNSSIFLRIICALTRVTSKRDESVTANNKKT*IDVTRRE*LNFIKDHAMTSL*ACNFPEEDFKGNDIP 362 NGVISK GSHG LFEVTG*S*IKH IY+PPALQVVPI*L F+QPQY+ LFSTQNSSIFLRIICALTR+TSKRDESVTAN+KKT*IDVTR E*L+FIKDHAMTSL*ACNFP++DFKGNDIP Subject 4300 NGVISKGGSHGPLFEVTG*S*IKHWIYEPPALQVVPI*LPFEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANDKKT*IDVTRGE*LDFIKDHAMTSL*ACNFPKKDFKGNDIP 4659
Range 5: 3309 to 4238 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
614.1 bits(1334) | 0.0 | 268/310(86%) | 0/310(0%) | Minus/Plus |
Query 424 SWLSSQHRRFGFEGRNKVVRGK*ITS*SSSFEPNHTEATW*KCLCRK*NDCLILR*APCETDHYNTGI*GELEVWGK*VASMWNFVFKVKSFSTLCPS*WLHDYSHCISTWKA*GGRAQLLM*AKHQSHL*RAMSRGGSEYDVFGRSF*GFRHLRQM*CQWRD*GY*SRRAHICSV*HNE*TH*ACREDW*RASKYKGG*AAKS*TISS*PAFSERVKDNIFSKF*KGGKTSGVLVGRSDWRDK**EI*RFKALACWSVNF*HQAKRIDSCAWYIWSWKEFPIQELHEEI*RKICNICLT*AGSSKFNQK 1353 SW SS HR FEG NKVV GK*IT *SSSF+PN+TEATW*KCLCRK*NDCLIL *A CETDHYN I* ELEVWG+*+ASMWNFVFKV+SFSTLCPS*WLHDYS+CISTWKA*G RAQLLM*A+HQSHL*RAMSRGGSEYDVFGRS *GFRHL M*CQW +* Y SRRAHICS *HNE*TH*ACR+DW*RASKYKGG*AAKS*TISS*PAF ERVKDNIFSKF* GGKTSGVL GR +WRDK**EI*RFKALACWSV F HQ KRIDS AW+IW WKEFP QELHEEI*RKICNICLT*AGSSKFNQK Subject 3309 SWFSS*HRWSSFEGGNKVVCGK*ITG*SSSFKPNYTEATW*KCLCRK*NDCLILC*ASCETDHYNARI*SELEVWGE*MASMWNFVFKVQSFSTLCPS*WLHDYSYCISTWKA*GRRAQLLM*AQHQSHL*RAMSRGGSEYDVFGRSV*GFRHLC*M*CQW*N*SYQSRRAHICSF*HNE*TH*ACRKDW*RASKYKGG*AAKS*TISS*PAFFERVKDNIFSKF*AGGKTSGVLAGRFNWRDK**EI*RFKALACWSVYFWHQTKRIDSRAWHIWGWKEFPTQELHEEI*RKICNICLT*AGSSKFNQK 4238
Range 6: 4305 to 4661 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
234.3 bits(505) | 0.0 | 104/119(87%) | 0/119(0%) | Minus/Plus |
Query 1 CRYL*SLPQESYRPKGWSLRDL**SSAIPSWLHRSMSSCYSQ*RFHLSCW*PLSKHI*FSKR*SYFGC*TERYIEVA*RKVI*VQLGEPEVCKSDV*FKITL*LQKGLHDCRFC*LRHF 357 CRYL*SL ESYRPKGWSLRDL**S AIP WLHRSMSSC+SQ*RFHLSCW* LSKHI*FSKR*SYFGC*TE +IE A R+VI*VQLGEPEV KS+V*FKITL*LQKG+HDCR C*LRHF Subject 4305 CRYL*SLS*ESYRPKGWSLRDL**SPAIPPWLHRSMSSCHSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEAARREVI*VQLGEPEVRKSNV*FKITL*LQKGVHDCRLC*LRHF 4661
Range 7: 4223 to 4264 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
29.5 bits(58) | 0.0 | 12/14(86%) | 0/14(0%) | Minus/Plus |
Query 398 QIQSKGT*KWMKSV 439 QIQSKGT KWM SV Subject 4223 QIQSKGTWKWMMSV 4264
Range 8: 3311 to 4318 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
610.0 bits(1325) | 0.0 | 291/336(87%) | 0/336(0%) | Plus/Minus |
Query 344 QR*RHXXXXXXXXXXXXXYTLHPFLGPF*LNLLEPA*VRQMLQIFLQIXXXXXCIGNSFQLQMYQAQLSILFA*CQKLTLQQAKALNR*ISHHLSRQSDLPTSTPEVFPPFQNLENMLSLTRSEKAGQELIV*LFAAHPPLYFEARYQSSRHA*CVHSLCQTEQICARLD**PQSRH*HHIWRRCRKPQKLLPNTSYSDPPLDIALQRCDWCLAYISN*ARPPHAFQVLMQWL*SCNH*EGHKVENDLTLNTKFHIEATHFPQTSSSPHIPVL**SVSHGA*RRIRQSFHFLHKHFHQVASVWLGSKELDQLVIHFPRTTLFLPSKPNRRC*EESQ 1351 QR*RHPSPPSLIC PS PYT HPF GPF*LNLLEPA*VRQMLQIFLQISS*SSC+GNSFQ QM QA+LSILF *CQK TLQQAKALNR*ISHHLSRQ +LP STPEVFPP QNLENMLSLTRS+KAGQELIV*LFAAHPPLYFEARYQS RHA*CVHSLCQ EQICARLD** Q H*HHI RCRKPQ LLPNTSYSDPPLDIALQRCDWC AYISN*AR PHAFQVLMQ L*SC+H*EGHKVEND TLNTKFHIEA H PQTSSS HI L**SVSH A* RIRQSFHFLHKHFHQVASV LG KELDQ VIHFP+TTLF PSK + C*EE+Q Subject 3311 QR*RHPSPPSLICLPSLPYTHHPFPGPF*LNLLEPA*VRQMLQIFLQISS*SSCVGNSFQPQMCQARLSILFV*CQK*TLQQAKALNR*ISHHLSRQLNLPASTPEVFPPAQNLENMLSLTRSKKAGQELIV*LFAAHPPLYFEARYQSFRHA*CVHSLCQKEQICARLD**LQFHH*HHI*HRCRKPQTLLPNTSYSDPPLDIALQRCDWCWAYISN*ARLPHAFQVLMQ*L*SCSH*EGHKVENDWTLNTKFHIEAIHSPQTSSSLHILAL**SVSHDA*HRIRQSFHFLHKHFHQVASV*LGLKELDQPVIHFPQTTLFPPSKLDHLC*EENQ 4318
Range 9: 4349 to 4660 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
226.5 bits(488) | 0.0 | 92/104(88%) | 0/104(0%) | Plus/Minus |
Query 2 KWRNQQKRQSWSPF*SYRVILNQTSDLQTSGSPSCTYMTFLQATSIYRSVQHPK*LYLFENHMCFDKGHQQER*KRHCE*QEDIDRCNQEGIAELHQRSRNDQP 313 KWRNQQ+RQSW+PF*SYRVILNQT DL+TSGSPSCTYMT L+A SI SVQHPK*LYLFENHMCFDK HQQER*KRHCE*QEDIDRCNQ GIA LHQRSRNDQP Subject 4349 KWRNQQRRQSWTPF*SYRVILNQTLDLRTSGSPSCTYMTSLRAASICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQGGIAGLHQRSRNDQP 4660
Range 10: 3311 to 4189 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
520.2 bits(1129) | 0.0 | 253/293(86%) | 0/293(0%) | Minus/Plus |
Query 473 LAFFSAPTVWL*RQE*GRSWKVNHQLIQLFRAQPYGSNXXXXXXXXXXXLPYSALGTM*D*SL*HRNMR*AGSLGKMSGLYVEFCV*SQIIFNLVPLLMVA*LQPLHQHLEGVRWTCSITYVGQAPITSLKSYVKGGV*I*CIWQKLLRLSTSAPNVMSMARLRLLIQAGAYLLCLT*RMNTLGMSRRLVAGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLKGRKNFRGACWEV*LA**VMRNLTIQSLGLLECQLLTSSKEN*QLCLVHLELERVSYTRAS*RDLKEN 1351 L FF A V L*R+E*GR WKVNH+LIQLF+ Q YGSNLVKMLMQKMK*LPYS LG M*D*SL* +NM+*AGSLG+M+GLYVEFCV*S IIFNLVPLLM A*LQ LHQHLEGVR TCSITYVG APITSLKSYVKGGV*I*CIWQK LRLSTS NVMSM +L+L IQAGAYLL LT*RMNTLGMS+RLV GLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVL GRKNFRGACWEV*LA**VMRNLTIQSLGLLEC LL S+KEN*Q CL HL LERVSYTRAS*RDLKEN Subject 3311 LVFFLAQMV*L*RRE*GRLWKVNHRLIQLFQTQLYGSNLVKMLMQKMK*LPYSVLGIM*D*SL*RQNMK*AGSLGRMNGLYVEFCV*SPIIFNLVPLLMAA*LQLLHQHLEGVR*TCSITYVGPAPITSLKSYVKGGV*I*CIWQKRLRLSTSVLNVMSMVKLKLSIQAGAYLLFLT*RMNTLGMSKRLVTGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLSGRKNFRGACWEV*LA**VMRNLTIQSLGLLECLLLASNKEN*QSCLAHLGLERVSYTRAS*RDLKEN 4189
Range 11: 4466 to 4660 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
136.2 bits(291) | 0.0 | 57/65(88%) | 0/65(0%) | Minus/Plus |
Query 2 KAHMILKKIELFWVLNRAIY*GCLKESHIGTTWRAGGL*IRCLIQDYPVTSKRAP*LPLLLITPF 196 KAHMILKKIELFWVLNR Y*GC K SHIGTTWRAGG *I+CLIQDYPVTSKR P*LP LLITPF Subject 4466 KAHMILKKIELFWVLNRVTY*GCSKGSHIGTTWRAGGS*IQCLIQDYPVTSKRGP*LPPLLITPF 4660
Grapevine rupestris stem pitting associated virus isolate Tannat Rspav1, complete genome
Sequence ID: KR528585.1 Length: 8595 Number of Matches: 12
Range 1: 3292 to 4641 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1036.6 bits(2256) | 0.0 | 432/450(96%) | 0/450(0%) | Minus/Plus |
Query 3 VGFLLSTDGLALKAGIRSFVESESPVDPALSSPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGSGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAI 1352 VGFLLSTDGLALKAGIRSFVESE V+P LS+P I KQL ENAYAENEMIALFC+RHHVRLI+ITPEYEVSWKFGE EWPLCGILCLKS+HFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCD+NGEIEVINP G+ISALFDITNEHIRHVEKIG+GPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDS+PWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDE CKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAI Subject 3292 VGFLLSTDGLALKAGIRSFVESERLVNPDLSAPAISKQLEENAYAENEMIALFCIRHHVRLIVITPEYEVSWKFGEGEWPLCGILCLKSSHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPRGKISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSRPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEGCKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAI 4641
Range 2: 3291 to 4643 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
824.9 bits(1794) | 0.0 | 396/451(88%) | 0/451(0%) | Plus/Minus |
Query 1 KMA*SAKAAVMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSNLNISLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHXXXXXXXXXXEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVRPPNKHP*SFSALSKLGKYVIFDPFRESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQMXXXXXXXXXYIIFRPPP*HSSSKM*LVLGLHK*LSTSTSRLPSADAMAVIMQPLRGAQG*K*FDFKHKIPHRGHSFSPNFQLTSYSGVIMISLTWCLTQNKXXXXXXXXXXXPSCFRMVGLERAGSTGDSLSTNDLIPAFKAKPSVLRRKPT 1353 KMA*SAKAAVMEPFLKLQG+LESNIGFTNLRLSKLYLYDFPSS+LN+SLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLH SSISRSLLIEFA+ARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQG ESLNFSSLITPVRPP+KHP*SFSA SKLGKYVIFDPF+ESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCS VMSN A++ P GLITSISP SHLAQMSKASKASAKYI+ RPPP* SSSK+*LVLGLH+* +TSTSRLPSA+AMAVIMQP GA G K* D + +IPHRGHS SPNFQLTSYSGVI ISLTWC QN AIISFSA*AFS +C M G ER+G T SLST D IPAF+A PSVL +KPT Subject 3291 KMA*SAKAAVMEPFLKLQGSLESNIGFTNLRLSKLYLYDFPSSSLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHPSSISRSLLIEFAKARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGLESLNFSSLITPVRPPSKHP*SFSARSKLGKYVIFDPFKESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSLVMSNNAEILPRGLITSISPFISHLAQMSKASKASAKYIMLRPPP*QSSSKI*LVLGLHR*FNTSTSRLPSAEAMAVIMQPFNGAHGWK*LDLRQRIPHRGHSPSPNFQLTSYSGVITISLTWCRIQNNAIISFSA*AFSSNCLEMAGAERSGFTKRSLSTKDRIPAFRASPSVLSKKPT 4643
Range 3: 3292 to 4236 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
456.1 bits(989) | 0.0 | 205/315(65%) | 0/315(0%) | Plus/Minus |
Query 408 IHF*VPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSSKCTKHNCQFSLLDVRS*HSSKPRL*IVKFLITYHASQTSQQAPLKFFRPFKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPATNLLDMPNVFIRYVKQSRYAPAWINNLNLAIDITFGADVESLKSFCQIHHIQTPPLT*LFKDVIGAWPT*VIEHVHLTPSKC*CNGCNHATIKRGTRLKMI*L*TQNST*RPLIFPKLPAHLIFRCYNDQSHMVPNAE*GNHFIFCISIFTKLLPYGWARKSWINW*FTFHERPYSCLQSQTVGAEKKAN 1352 IH VPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSS KCTK+NCQFSL +V S*HSSKPR *I+KFL+ YH S TSQQAPLKFFRP KTWKICYL*PVQRKQVKS*SFNFSQLIH YTLRP TNL DMP V I YVKQ R IN+ NL+I ITF A+V+ LKSF IHH++TP LT L K++I A T +I H++ TPSKC* NGC+HATI+ GT L++ * +NS P FPK P IF C Q HMVPN +* NH I ISI +L GW K WI T H+R + LQ +++ AE K N Subject 3292 IHLQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCTKYNCQFSLFNVGS*HSSKPRP*IIKFLVAYHTS*TSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHFYTLRPITNLFDMPYVLISYVKQCRNFTTRINHFNLSIYITFSANVKGLKSFS*IHHVKTPSLTKLLKNMISAGSTQII*HINFTPSKC*SNGCDHATIQWGTWLEVT*FKAKNSAQGPFTFPKFPTDFIFWCDYYQPHMVPNTK*CNHLILGISILFQLFRNGWG*KIWIYQALTLHKRSNTGLQGKSISAE*KTN 4236
Range 4: 4282 to 4641 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
248.5 bits(536) | 0.0 | 107/120(89%) | 0/120(0%) | Plus/Minus |
Query 3 NGVISKSGSHGALFEVTG*S*IKHRIYKPPALQVVPI*LSFKQPQYIALFSTQNSSIFLRIICALTRVTSKRDESVTANNKKT*IDVTRRE*LNFIKDHAMTSL*ACNFPEEDFKGNDIP 362 NGVISKSGSHGA FEVTG*S*IKHRIY+PPALQVVPI*L F+QPQY+ LFSTQNSSIFLRIICALTR+TSKRDESVTANNKKT*IDVTR E*LNFIKDHAMTSL*ACNFP+++FKG++IP Subject 4282 NGVISKSGSHGAFFEVTG*S*IKHRIYEPPALQVVPI*LPFEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*IDVTRGE*LNFIKDHAMTSL*ACNFPKKNFKGDNIP 4641
Range 5: 3327 to 4220 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
420.8 bits(912) | 0.0 | 195/298(65%) | 0/298(0%) | Minus/Plus |
Query 424 EGRNKVVRGK*ITS*SSSFEPNHTEATW*KCLCRK*NDCLILR*APCETDHYNTGI*GELEVWGK*VASMWNFVFKVKSFSTLCPS*WLHDYSHCISTWKA*GGRAQLLM*AKHQSHL*RAMSRGGSEYDVFGRSF*GFRHLRQM*CQWRD*GY*SRRAHICSV*HNE*TH*ACREDW*RASKYKGG*AAKS*TISS*PAFSERVKDNIFSKF*KGGKTSGVLVGRSDWRDK**EI*RFKALACWSVNF*HQAKRIDSCAWYIWSWKEFPIQELHEEI*RKICNICLT*AGSSKFNQK 1317 EGR + G+* S SF P+H +CLCR+*+DC+IL APCE D +T I* +LE+WG+*+A + N + +KS T+CP WLHD+SHC STWKA* +L +* +H S+ * A+S GS +DVF SF*G HLR M* +WRD* *S + C V*HN * H ACR+DW* ASKYK G*AAKS*TISS*PAF ERVKDNIFSKF* GGKTSGVL GRS+W DK EI* FKALACWSVNF H KRIDSC WYIW WKEFPIQELHEEI*RKICNICLT*AG SKFNQK Subject 3327 EGRYSIFCGE*ALGKSRSFSPSHF*TIGRECLCRE*DDCIILYSAPCEADSNHTRI*SQLEIWGR*MAPVRNSLP*IKSLPTMCPIEWLHDHSHCFSTWKA*S*CVKLSV*TQH*SYF*GALSGRGS*HDVFS*SF*GL*HLR*M*YKWRD*SD*SAW*NFCIV*HN**AHKACRKDW*WASKYKSG*AAKS*TISS*PAFFERVKDNIFSKF*AGGKTSGVLAGRSNWCDKRREI**FKALACWSVNFRH*TKRIDSCTWYIWGWKEFPIQELHEEI*RKICNICLT*AGFSKFNQK 4220
Range 6: 4287 to 4643 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
231.5 bits(499) | 0.0 | 104/119(87%) | 0/119(0%) | Minus/Plus |
Query 1 CRYL*SLPQESYRPKGWSLRDL**SSAIPSWLHRSMSSCYSQ*RFHLSCW*PLSKHI*FSKR*SYFGC*TERYIEVA*RKVI*VQLGEPEVCKSDV*FKITL*LQKGLHDCRFC*LRHF 357 C +L*S ESYRPKGWSLRDL**SSAIP WLHRSMSSCYSQ*RFHLSCW* LSKHI*FSKR*SYFGC*TE +IE A R+VI*VQLGEPEV KSDV*FK TL*LQK LHDCRFC*LRHF Subject 4287 CCHL*SFS*ESYRPKGWSLRDL**SSAIPPWLHRSMSSCYSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEAARREVI*VQLGEPEVRKSDV*FKTTL*LQKRLHDCRFC*LRHF 4643
Range 7: 3293 to 4300 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
404.3 bits(876) | 0.0 | 217/336(65%) | 0/336(0%) | Plus/Minus |
Query 344 QR*RHXXXXXXXXXXXXXYTLHPFLGPF*LNLLEPA*VRQMLQIFLQIXXXXXCIGNSFQLQMYQAQLSILFA*CQKLTLQQAKALNR*ISHHLSRQSDLPTSTPEVFPPFQNLENMLSLTRSEKAGQELIV*LFAAHPPLYFEARYQSSRHA*CVHSLCQTEQICARLD**PQSRH*HHIWRRCRKPQKLLPNTSYSDPPLDIALQRCDWCLAYISN*ARPPHAFQVLMQWL*SCNH*EGHKVENDLTLNTKFHIEATHFPQTSSSPHIPVL**SVSHGA*RRIRQSFHFLHKHFHQVASVWLGSKELDQLVIHFPRTTLFLPSKPNRRC*EESQ 1351 QR*+HPSPPSLIC PSPPYT HP GPF*LNLL+PA*VRQMLQIFLQISS*SSCIGNSFQ QMYQ QLSILF *C+KLTLQQAKALN *IS LS Q DLP STPEVFPP QNLENMLSLTRS+KAGQELIV*LFAAHP LYFEA YQS RHA C H LCQT Q D* QS H +HI R+C++PQKL NTS DP D A Q+ D C Y N HAFQVL QWL*SCNH GH V +DL +F A H PQ S+ HI V S SHGA +I QS H HKH + WLG K+LD H P+ + PS +C* ++Q Subject 3293 QR*QHPSPPSLICLPSPPYTPHPSPGPF*LNLLKPA*VRQMLQIFLQISS*SSCIGNSFQPQMYQVQLSILFV*CRKLTLQQAKALNH*ISRRLSHQLDLPASTPEVFPPAQNLENMLSLTRSKKAGQELIV*LFAAHPLLYFEAHYQSFRHALCAH*LCQTMQKFYHAD*SLQSLHLYHI*RKCQRPQKLQLNTSC*DPLPDKAPQKYD*CWVYTDNLTHQLHAFQVLKQWL*SCNHSMGHMVGSDLI*GKEFRTGAIHLPQISN*LHILV*LLSASHGAEYKIMQSSHSRHKHSLPIV*KWLGLKDLDLPSAHSPQKIEYRPSGQVHQC*VKNQ 4300
Range 8: 4331 to 4642 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
230.2 bits(496) | 0.0 | 94/104(90%) | 0/104(0%) | Plus/Minus |
Query 2 KWRNQQKRQSWSPF*SYRVILNQTSDLQTSGSPSCTYMTFLQATSIYRSVQHPK*LYLFENHMCFDKGHQQER*KRHCE*QEDIDRCNQEGIAELHQRSRNDQP 313 KWRNQQKRQSWS F*SYRV+LNQTSDL+TSGSPSCTYMT L+A SI SVQHPK*LYLFENHMCFDK HQQER*KRHCE*QEDIDRCNQ GIAELHQRSRNDQP Subject 4331 KWRNQQKRQSWSLF*SYRVVLNQTSDLRTSGSPSCTYMTSLRAASICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQGGIAELHQRSRNDQP 4642
Range 9: 3446 to 4171 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
321.8 bits(696) | 0.0 | 162/242(67%) | 0/242(0%) | Minus/Plus |
Query 473 YSALGTM*D*SL*HRNMR*AGSLGKMSGLYVEFCV*SQIIFNLVPLLMVA*LQPLHQHLEGVRWTCSITYVGQAPITSLKSYVKGGV*I*CIWQKLLRLSTSAPNVMSMARLRLLIQAGAYLLCLT*RMNTLGMSRRLVAGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLKGRKNFRGACWEV*LA**VMRNLTIQSLGLLECQLLTSSKEN*QLCLVHLELERVSYTRAS*RDLKEN 1198 Y GTM* * H+NM+ G+LGK++G EF +Q+ N VP MVA* QPL QHLEGV+ C I V A I L+S+V+ GV *CI KLLR T A NV+ M RL+ LI+ +L CLT* M+T GMS+RLV GLKV*+WMSCEKLNDQLLTCFL*TGQR*HIFQVL GRKNFRGACWEV*L ** RNL IQ LGLLECQL T +KEN*QL LVHL LERVSYTRAS*RDLKEN Subject 3446 YFVFGTM*G***SHQNMKSVGNLGKVNGPCAEFFALNQVTSNHVPH*MVA*SQPLLQHLEGVKLMC*IICVDPALIIFLRSFVREGVLT*CI*LKLLRPLTFALNVI*MERLK*LIRVVKFLHCLT*LMST*GMSKRLVMGLKV*KWMSCEKLNDQLLTCFL*TGQR*HIFQVLSGRKNFRGACWEV*LV**ATRNLMIQGLGLLECQLPTLNKEN*QLYLVHLGLERVSYTRAS*RDLKEN 4171
Range 10: 4448 to 4642 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
141.7 bits(303) | 0.0 | 59/65(91%) | 0/65(0%) | Minus/Plus |
Query 2 KAHMILKKIELFWVLNRAIY*GCLKESHIGTTWRAGGL*IRCLIQDYPVTSKRAP*LPLLLITPF 196 KAHMILKKIELFWVLNR Y*GC K SHIGTTWRAGG *IRCLIQDYPVTSK+AP*LPLLLITPF Subject 4448 KAHMILKKIELFWVLNRVTY*GCSKGSHIGTTWRAGGS*IRCLIQDYPVTSKKAP*LPLLLITPF 4642
Range 11: 4205 to 4393 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
81.7 bits(172) | 0.0 | 52/63(83%) | 0/63(0%) | Minus/Plus |
Query 251 QIQSKGT*KWMKSVXXXXXXXXXXRAGMSLPLKSSSGKLQA*RLVIA*SLMKFSYSLLVTSIY 439 QIQSKGT +WM+ VRW*R+ANQRRRAGM PLK GKLQA*RLVIA*SLMKFSYS LVTSIY Subject 4205 QIQSKGTWRWMRGVRW*RQANQRRRAGMLSPLKFFLGKLQA*RLVIA*SLMKFSYSPLVTSIY 4393
Grapevine rupestris stem pitting associated virus isolate VF1, partial genome
Sequence ID: KT948710.1 Length: 8716 Number of Matches: 15
Range 1: 3311 to 4660 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1017.4 bits(2214) | 0.0 | 417/450(93%) | 0/450(0%) | Minus/Plus |
Query 3 VGFLLSTDGLALKAGIRSFVESESPVDPALSSPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGSGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAI 1352 VGFLLSTDGLALKAGIRSFVESES DPALS+ T+ +QLG+NAYAENEMIALFC+RHHVRLIIITPEYEVSWKFG++EWPLCGILCL+SNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCD+NGEIEVINP GR+SALFDITNEHIRHVEKIG+GPQSIKVDELRKVKRSALDLLS+NGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWL+G+STS+IK RELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMD+ CKV KAGKSK+EGWDVVTFEVFLRK+ LKAGHCVIFDEVQLFPPGY+DLCLL IRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYN+ESRRFVNPMF+SRLPC+FKKGSMTAAFADYAI Subject 3311 VGFLLSTDGLALKAGIRSFVESESLADPALSTQTVLQQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAI 4660
Range 2: 3310 to 4662 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
730.1 bits(1587) | 0.0 | 361/451(80%) | 0/451(0%) | Plus/Minus |
Query 1 KMA*SAKAAVMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSNLNISLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHXXXXXXXXXXEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVRPPNKHP*SFSALSKLGKYVIFDPFRESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQMXXXXXXXXXYIIFRPPP*HSSSKM*LVLGLHK*LSTSTSRLPSADAMAVIMQPLRGAQG*K*FDFKHKIPHRGHSFSPNFQLTSYSGVIMISLTWCLTQNKXXXXXXXXXXXPSCFRMVGLERAGSTGDSLSTNDLIPAFKAKPSVLRRKPT 1353 KMA*SAKAAVMEPFLK G+L+SNIGFTNLRLS LYL D PSSNLNISLCSAP IA SF ESYVL QGSPA EMKASLR+ R RS *PGGNS*TSSKITQ PAFR FLR TSKVTTSQPS FDLPAF TL SSISRSLLIE ARA LGET VTN PSDLF+KLLYRKL PAP VPSTTVNS L+ EVD P S G ESLNFSSLITPV+PP+KHP SFSALSKLGK VIFDPF E RSRADR TF SSSTF+L GPLPIFSTCL+CS VMSNRADMRP GLITSISPL SHLAQMS ASKASA+YI+FRPPP H+SSKM* V GLH+*L TSTSRLPSA+A+AVIMQP GA G*K*FD KHKIPH+GHS SPNFQLTSYSGVIMI+LT CL QNKAIISFSA*A SPSC + V ++RAGS DSLSTN+ +PAFKA PSVL +KPT Subject 3310 KMA*SAKAAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVLWQGSPASEMKASLRMVNRQRST*PGGNS*TSSKITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRSLLIELARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTFLSSSTFMLCGPLPIFSTCLICSLVMSNRADMRPLGLITSISPLMSHLAQMSNASKASARYIMFRPPPWHNSSKM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAHG*K*FDCKHKIPHKGHSLSPNFQLTSYSGVIMINLT*CLMQNKAIISFSA*ALSPSCCKTVWVDRAGSARDSLSTNERMPAFKASPSVLNKKPT 4662
Range 3: 3311 to 4255 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
356.6 bits(772) | 0.0 | 163/315(52%) | 0/315(0%) | Plus/Minus |
Query 408 IHF*VPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSSKCTKHNCQFSLLDVRS*HSSKPRL*IVKFLITYHASQTSQQAPLKFFRPFKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPATNLLDMPNVFIRYVKQSRYAPAWINNLNLAIDITFGADVESLKSFCQIHHIQTPPLT*LFKDVIGAWPT*VIEHVHLTPSKC*CNGCNHATIKRGTRLKMI*L*TQNST*RPLIFPKLPAHLIFRCYNDQSHMVPNAE*GNHFIFCISIFTKLLPYGWARKSWINW*FTFHERPYSCLQSQTVGAEKKAN 1352 IHF + F+*I *SPP *+K Y+F+FR LH+AL+ +TL+SSK KH+CQF D+ S*+ KP L I+KF +TYHAS S Q L+ F PFK WK+ YL + R++VKS S +FSQ IHLY LR TNLL+MP +FI YVKQS +A A I+NLNL I++T +VE +S +IHH+Q L FK+VI ++++++ T +K * N C+HA I+ GT LK+I*L QNST*RPL KLP H IF NDQ HM+PNAE*G H + CISI TKLL +SWI FTF++R Y+ QS+ + A+++ + Subject 3311 IHFQISFN*IS*SPPG*NKGYEFTFRPLHKALIQKTLASSKSPKHDCQFPRFDI*S*YP*KPWLGIIKFFVTYHAS*AS*QTSLQLFCPFKAWKVSYLRSIHREEVKSRSLHFSQFIHLYALRAVTNLLNMPYMFISYVKQS*HASARIDNLNLPINVTLSTNVERFESLSEIHHVQAATLAQFFKNVICRGSAQIVKNIYFTSTKR*GNSCDHAAIQWGTWLKVI*LQAQNST*RPLAISKLPTHFIFWSDNDQPHMMPNAE*GYHLVLCISIVTKLLQNSLG*QSWICKGFTFNKRTYAGFQSKPICAQQETH 4255
Range 4: 4301 to 4660 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
129.4 bits(276) | 0.0 | 60/120(50%) | 0/120(0%) | Plus/Minus |
Query 3 NGVISKSGSHGALFEVTG*S*IKHRIYKPPALQVVPI*LSFKQPQYIALFSTQNSSIFLRIICALTRVTSKRDESVTANNKKT*IDVTRRE*LNFIKDHAMTSL*ACNFPEEDFKGNDIP 362 NG+IS+S SHGAL E+T S +KH I+KPPAL VVP+ L+ K QYI L ++ L +ICAL VTS+ +ESVT+ +T +++ R+ LN IKDH M L* N E+ FKG+D+P Subject 4301 NGIISESCSHGALLEMTWQSGLKHWIHKPPALNVVPVGLALK*SQYITLLGP*YCAVLLGVICALAGVTSE*NESVTSYG*QTKVNIAWRKQLNLIKDHTMACL*ILNLSEKHFKGHDVP 4660
Range 5: 3325 to 4239 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
320.9 bits(694) | 0.0 | 158/305(52%) | 0/305(0%) | Minus/Plus |
Query 424 QHRRFGFEGRNKVVRGK*ITS*SSSFEPNHTEATW*KCLCRK*NDCLILR*APCETDHYNTGI*GELEVWGK*VASMWNFVFKVKSFSTLCPS*WLHDYSHCISTWKA*GGRAQLLM*AKHQSHL*RAMSRGGSEYDVFGRSF*GFRHLRQM*CQWRD*GY*SRRAHICSV*HNE*TH*ACREDW*RASKYKGG*AAKS*TISS*PAFSERVKDNIFSKF*KGGKTSGVLVGRSDWRDK**EI*RFKALACWSVNF*HQAKRIDSCAWYIWSWKEFPIQELHEEI*RKICNICLT*AGSSKFNQK 1338 +HR FE R+ V K*I SSS PN ATW*+CLCR+ +D LIL *A CE DHY++ I* ELEVW VA MWNFV +KS ST+CP WLHD+S+C+S W * + L + ++SH *R + R E+DV F RHL +* W D*GY S R H+ SV*HN *T+ AC EDW*R +++KGG* KS I S*P E ++DN+ SK *KG K +G+ R +WRDK* +I* F+A+A +NF +Q IDS AW WSW+EF + EL+EE+*R I N+C T GSS FN K Subject 3325 EHRWACFESRHTFVC*K*IPCRSSSVNPNCFAATW*QCLCRERDDSLILH*ASCEVDHYHSRI*SELEVWR*RVAFMWNFVLAIKSLSTMCPIEWLHDHSYCLSAW*T*SRCS*LSVQTLYKSHF*RIVPRWRPEHDVSR*GFRSVRHLC*V*H*WGD*GYQS*RTHVSSV*HN**TYKAC*EDW*RPAEHKGG*TEKSEAICS*PPLDEWIEDNLLSKL*KGRKAAGMFARRLNWRDK*RKI**FQAMAFRDINFKYQISGIDSRAWDFWSWQEFSV*ELYEEV*R*IRNLCFTQEGSS*FN*K 4239
Range 6: 4467 to 4661 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
67.0 bits(140) | 0.0 | 35/65(54%) | 0/65(0%) | Minus/Plus |
Query 2 KAHMILKKIELFWVLNRAIY*GCLKESHIGTTWRAGGL*IRCLIQDYPVTSKRAP*LPLLLITPF 196 KAHM K+ + ++ IY* L+ S GTT RAGGL*I+CL D V S+RAP*L L LI PF Subject 4467 KAHMTPKRTAQY*GPSKVIY*DYLRASPTGTTLRAGGL*IQCLSPDCHVISRRAP*LQLSLIMPF 4661
Range 7: 4309 to 4488 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.5 bits(106) | 0.0 | 30/60(50%) | 0/60(0%) | Minus/Plus |
Query 175 RYL*SLPQESYRPKGWSLRDL**SSAIPSWLHRSMSSCYSQ*RFHLSCW*PLSKHI*FSK 354 R L*S+ Q+ KG L DL** SA+ S L +S +++*RFH + W*PL KHI* K Subject 4309 RDL*SVSQKD*ESKGRPLCDL**GSAVSSRLC*PLSVNHTK*RFHFTRW*PLPKHI*LPK 4488
Range 8: 3690 to 4256 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
175.6 bits(377) | 0.0 | 101/189(53%) | 0/189(0%) | Plus/Minus |
Query 407 HPFLGPF*LNLLEPA*VRQMLQIFLQIXXXXXCIGNSFQLQMYQAQLSILFA*CQKLTLQQAKALNR*ISHHLSRQSDLPTSTPEVFPPFQNLENMLSLTRSEKAGQELIV*LFAAHPPLYFEARYQSSRHA*CVHSLCQTEQICARLD**PQSRH*HHIWRRCRKPQKLLPNTSYSDPPLDIALQRCD 973 HPF F*LN LEP+ V+Q L+I+LQ SS*SS NS QLQ QA+LSI * KL +A A N *I HLSRQ L + P F PFQ+LE+ LS S + GQE I LF+ HPPL RYQSS+HA VH LCQTE C R D**PQS H* H +CR +K +TS S L LQ+CD Subject 3690 HPFPDLF*LN*LEPSWVKQRLRIYLQTSS*SSYTENSCQLQKSQARLSIPEI*YLKLISLKAMAWNH*IFRHLSRQLSLLANIPAAFLPFQSLESKLSSIHSSRGGQEQIASLFSVHPPLCSAGRYQSSQHALYVH*LCQTELTCVR*D**PQSPH*CHT*HKCRTLRKPQRDTSCSGRHLGTILQKCD 4256
Range 9: 3327 to 3650 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
114.2 bits(243) | 0.0 | 58/108(54%) | 0/108(0%) | Plus/Minus |
Query 1013 HAFQVLMQWL*SCNH*EGHKVENDLTLNTKFHIEATHFPQTSSSPHIPVL**SVSHGA*RRIRQSFHFLHKHFHQVASVWLGSKELDQLVIHFPRTTLFLPSKPNRRC 1336 H +Q L Q L*SC+H GH VE+DL +TKFHI+AT + QTS+S HI **S SH A* RIR S LHKH HQVA+ G ELD IHF +T + SK C Subject 3327 HVYQALRQ*L*SCSHSMGHMVESDLIASTKFHIKATRYLQTSNSLHILE***STSHDA*CRIRLSSRSLHKHCHQVAAKQFGLTELDLQGIHFQQTNVCRLSKQAHLC 3650
Range 10: 4521 to 4661 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
59.3 bits(123) | 0.0 | 26/47(55%) | 0/47(0%) | Plus/Minus |
Query 2 KWRNQQKRQSWSPF*SYRVILNQTSDLQTSGSPSCTYMTFLQATSIY 142 KW NQ+K QSWSP *+ + QT D QTSGS CT T Q SIY Subject 4521 KWHNQRKLQSWSPS*NDMAVWTQTLDSQTSGSQCCTCRTCPQVISIY 4661
Range 11: 4350 to 4487 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
49.2 bits(101) | 0.0 | 22/46(48%) | 0/46(0%) | Plus/Minus |
Query 176 FENHMCFDKGHQQER*KRHCE*QEDIDRCNQEGIAELHQRSRNDQP 313 F +HMCF +GHQ+ +*KRH D + + E AE HQRS N P Subject 4350 FGSHMCFGRGHQRVK*KRHFVWLTDKGQHSLEETAEPHQRSHNGLP 4487
Range 12: 3690 to 4190 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
138.1 bits(295) | 0.0 | 87/167(52%) | 0/167(0%) | Minus/Plus |
Query 473 ITSLKSYVKGGV*I*CIWQKLLRLSTSAPNVMSMARLRLLIQAGAYLLCLT*RMNTLGMSRRLVAGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLKGRKNFRGACWEV*LA**VMRNLTIQSLGLLECQLLTSSKEN*QLCLVHLELERVSYTRAS*RDLKEN 973 IT LK+ K * *CI +L + ST +V M RLRL I A A LCLT* MN GM RRLV + *RWM+ EK +D LLT * +R* FQ LKG+K+ R C E *LA**V +NL I S G QL S+ N*Q CL LEL RV RA *R LK N Subject 3690 ITFLKNCAKVAA*T*CISLRLSKRSTFVLSVTLMGRLRLSILADACQLCLT*LMNI*GMLRRLVTARRA*RWMN*EK*SDLLLTSSR*MDRR*LTFQALKGQKSCRDVC*EA*LA**VTKNLMIPSHGFQGYQLQISNLGN*QSCLGLLELARVFCIRAL*RGLKVN 4190
Range 13: 3462 to 3653 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
70.7 bits(148) | 0.0 | 39/64(61%) | 0/64(0%) | Minus/Plus |
Query 1010 PYSALGTM*D*SL*HRNMR*AGSLGKMSGLYVEFCV*SQIIFNLVPLLMVA*LQPLHQHLEGVR 1201 PYSALG M* *SL +NM+* GSL SGLYVEFC +QI FN VP M A* Q L Q L V+ Subject 3462 PYSALGIM*G*SLSLQNMK*VGSLEIASGLYVEFCACNQITFNHVPH*MAA*SQLLPQRLVDVK 3653
Range 14: 4522 to 4662 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
57.0 bits(118) | 0.0 | 26/47(55%) | 0/47(0%) | Minus/Plus |
Query 1 YIEVA*RKVI*VQLGEPEVCKSDV*FKITL*LQKGLHDCRFC*LRHF 141 YIE+ * +V+ VQ EPEVC+S+V* + + Q+GLHDC F *L HF Subject 4522 YIEIT*GQVLQVQH*EPEVCESNV*VQTAMSFQEGLHDCSFR*LCHF 4662
Range 15: 4227 to 4385 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
37.3 bits(75) | 0.0 | 28/53(53%) | 0/53(0%) | Minus/Plus |
Query 278 IQSKGT*KWMKSVXXXXXXXXXXRAGMSLPLKSSSGKLQA*RLVIA*SLMKFS 436 IQ K KWM + +W R+A+QR R G S PLK S +L+ *R I *SLM+FS Subject 4227 IQLKEIWKWMMAAKWQRQASQRERVGTS*PLKCFSERLRI*RQAIV*SLMRFS 4385
Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome
Sequence ID: KR054734.1 Length: 8753 Number of Matches: 12
Range 1: 3310 to 4659 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1023.8 bits(2228) | 0.0 | 420/450(93%) | 0/450(0%) | Minus/Plus |
Query 3 VGFLLSTDGLALKAGIRSFVESESPVDPALSSPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGSGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAI 1352 VGFLLSTDGLALKAGIRSFVESES VDP+LS+ T+ +QL +NAYAENEMIALFC+RHHVRLIIITPEYEVSWKFG++EWPLCGILCL+SNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCD+NGEIEVINPGGR+SALFDITNEHIRHVEKIG+GPQSIKVDELRKVKRSALDLLS+NGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWL+G+STSDIK RELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMD+ CKV KAGKSKKEGWDVVTFEVFLRK+ LKAGHCVIFDEVQLFPPGYIDLCLL IRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYN+ESRRFVNPMF+SRLPC+FKKGSMTAAFADYAI Subject 3310 VGFLLSTDGLALKAGIRSFVESESLVDPSLSAQTVLRQLSDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPGGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSDIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKIANLKAGHCVIFDEVQLFPPGYIDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAI 4659
Range 2: 3462 to 4661 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
692.5 bits(1505) | 0.0 | 329/400(82%) | 0/400(0%) | Plus/Minus |
Query 1 KMA*SAKAAVMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSNLNISLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHXXXXXXXXXXEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVRPPNKHP*SFSALSKLGKYVIFDPFRESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQMXXXXXXXXXYIIFRPPP*HSSSKM*LVLGLHK*LSTSTSRLPSADAMAVIMQPLRGAQG*K*FDFKHKIPHRGHSFSPNFQLTSYSGVIMISLTWCLTQNK 1200 K+A*SA AAVMEPFLK G+L+SNIGFTNLRLS LYL D PSSNLNISLCSAP IA SF ESYVL*QGSPAREMKASLR+ R RS+*PGGNS*TSSK+TQ PAFR FLR TSKVTTSQPSFFDLPAF TL SSIS+SLLIEFARA LGET VTN PSDLF+KLLYRKL PAP VPSTTVNS L+SEVD P S G ESLNFSSLITPV+PP+KHP SFSALSKLGK VIFDPF E RSRADR TF SSSTF+L GPLPIFSTCL+CS VMSNRADMRPPGL+TSISPL SHLAQMS ASKASA+YI+F+PPP*HSSS M* V GLH+*L TSTSRLPSA+A+AVIMQP GAQG*K*FD KHKIPHRGHS SPNFQLTSYSGVIMISLT CL QNK Subject 3462 KIA*SANAAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVL*QGSPAREMKASLRMVNRQRSI*PGGNS*TSSKMTQWPAFRFAIFLRNTSKVTTSQPSFFDLPAFATLQLSSISKSLLIEFARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLISEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTFLSSSTFMLCGPLPIFSTCLICSLVMSNRADMRPPGLMTSISPLISHLAQMSNASKASARYIMFKPPP*HSSSNM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHRGHSLSPNFQLTSYSGVIMISLT*CLMQNK 4661
Range 3: 3309 to 3425 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
57.0 bits(118) | 0.0 | 23/39(59%) | 0/39(0%) | Plus/Minus |
Query 1237 SCFRMVGLERAGSTGDSLSTNDLIPAFKAKPSVLRRKPT 1353 SC + V ++ GST DSLST + +PAFKA PSVL +KPT Subject 3309 SCLKTVWADKDGSTRDSLSTKERMPAFKASPSVLNKKPT 3425
Range 4: 3310 to 4254 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
365.8 bits(792) | 0.0 | 169/315(54%) | 0/315(0%) | Plus/Minus |
Query 408 IHF*VPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSSKCTKHNCQFSLLDVRS*HSSKPRL*IVKFLITYHASQTSQQAPLKFFRPFKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPATNLLDMPNVFIRYVKQSRYAPAWINNLNLAIDITFGADVESLKSFCQIHHIQTPPLT*LFKDVIGAWPT*VIEHVHLTPSKC*CNGCNHATIKRGTRLKMI*L*TQNST*RPLIFPKLPAHLIFRCYNDQSHMVPNAE*GNHFIFCISIFTKLLPYGWARKSWINW*FTFHERPYSCLQSQTVGAEKKAN 1352 IHF V F+*IC*SP *+K Y+F+FR LH+ALV + +SSK KH+CQ S D+RS*+S +P L IVK LITYH S Q PL+ F PFKTWK+ YL* + K+VKS SF+FSQLIHLY LR NLL+M N+ + YVK S +APA +++LNL IDIT A+V+ +SF +IHH+QT LT LFK VI P V++++H T ++ + C+HA I GTRLKMI*L +ST RPL KLP HLIF NDQ HM+PNA+*G HF+ CISI T+L G + WI FTF+ER Y+C QS+ + +++ + Subject 3310 IHFQVSFN*IC*SPSG*NKGYEFAFRPLHKALVQKAFTSSKGAKHDCQLSRFDIRS*YS*EPWLGIVKLLITYHTS*AP*QTPLQLFSPFKTWKVSYL*SIH*KEVKSRSFHFSQLIHLYALRAVANLLNMSNMLVGYVK*S*HAPARVDDLNLPIDITLSANVKCFESFSEIHHVQTTTLTQLFKYVICGGPAQVVKNIHFTSTERRGDSCDHAAI*WGTRLKMI*LQA*DSTQRPLAISKLPTHLIFWGNNDQPHMMPNAK*GYHFVLCISIITELPQNGLG*QRWIYKRFTFNERTYACFQSKPICTQQETH 4254
Range 5: 4300 to 4653 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
138.5 bits(296) | 0.0 | 61/118(52%) | 0/118(0%) | Plus/Minus |
Query 9 VISKSGSHGALFEVTG*S*IKHRIYKPPALQVVPI*LSFKQPQYIALFSTQNSSIFLRIICALTRVTSKRDESVTANNKKT*IDVTRRE*LNFIKDHAMTSL*ACNFPEEDFKGNDIP 362 +ISK SHGAL E+T S +KH I+KPP L VVP+ L+ K QYI L S+Q +I L +ICALT +TSKR+ES+T+ +T +++ RE LN IK+ AM L CNFP++ FKG+++P Subject 4300 IISKCCSHGALLEMTWQSGLKHWIHKPPTLNVVPVGLTLK*SQYITLLSSQYCAILLGVICALTGITSKRNESITSYG*QTKVNIAWREQLNLIKNDAMACLQVCNFPKKHFKGHNVP 4653
Range 6: 3324 to 4238 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
336.9 bits(729) | 0.0 | 163/305(53%) | 0/305(0%) | Minus/Plus |
Query 424 QHRRFGFEGRNKVVRGK*ITS*SSSFEPNHTEATW*KCLCRK*NDCLILR*APCETDHYNTGI*GELEVWGK*VASMWNFVFKVKSFSTLCPS*WLHDYSHCISTWKA*GGRAQLLM*AKHQSHL*RAMSRGGSEYDVFGRSF*GFRHLRQM*CQWRD*GY*SRRAHICSV*HNE*TH*ACREDW*RASKYKGG*AAKS*TISS*PAFSERVKDNIFSKF*KGGKTSGVLVGRSDWRDK**EI*RFKALACWSVNF*HQAKRIDSCAWYIWSWKEFPIQELHEEI*RKICNICLT*AGSSKFNQK 1338 ++R FE R+ R K*I+ S PN EA * CLCR+ ND LIL *A CE DHY I*GELEVW VAS+WN + VKSFSTLCP WLHD+S+ + * G + L + A H+SH+*RA+SR E+DV SF HLR +* QW D*G+ RAH+ S+*HN+ +* C EDW R +++KGG*A KS TI S*P F+E +KDN+ SKF*KG K +GV +W DK**E+*RF+A+A ++NF*+Q R+DS AW++WSW + +QEL+EE+*R+I N+C T GSSKFN K Subject 3324 EYRWACFESRHTFFR*K*ISCRSIFVSPNRFEAAQ**CLCRERNDSLILH*ASCEADHYYPRI*GELEVWR*RVASVWNLMLAVKSFSTLCPIKWLHDHSYRLCAR*T*SGCS*LPVQALHKSHI*RAVSRWWFEHDVSR*SFRSI*HLR*V*YQWGD*GHQPWRAHVSSI*HNQRAY*TC*EDWQRPAEHKGG*AEKSETICS*PPFNEWIKDNLLSKF*KG*KAAGVFARGLNWCDK**EV*RFQAMALRNINF*YQISRVDSRAWHLWSW*KLSVQELYEEV*RQIRNLCFTQKGSSKFN*K 4238
Range 7: 4314 to 4652 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.0 bits(214) | 0.0 | 55/113(49%) | 0/113(0%) | Minus/Plus |
Query 10 L*SLPQESYRPKGWSLRDL**SSAIPSWLHRSMSSCYSQ*RFHLSCW*PLSKHI*FSKR*SYFGC*TERYIEVA*RKVI*VQLGEPEVCKSDV*FKITL*LQKGLHDCRFC*L 348 L*S+ E+ +P+G LR ** S +PS L+ +S +++* FH SCW* LSKHI* K G * E YIE+ * V+ VQ E EVC+S+V* + + Q+GLHDC C*L Subject 4314 L*SVS*ENCKPEGRPLRHF**GSTVPSRLY*PLSVNHTK*CFHFSCW*SLSKHI*LPKGSRNTGS*AE*YIEIT*G*VLQVQH*ESEVCESNV*VQTAMSFQEGLHDCSIC*L 4652
Range 8: 3341 to 4255 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
304.4 bits(658) | 0.0 | 164/305(54%) | 0/305(0%) | Plus/Minus |
Query 407 HPFLGPF*LNLLEPA*VRQMLQIFLQIXXXXXCIGNSFQLQMYQAQLSILFA*CQKLTLQQAKALNR*ISHHLSRQSDLPTSTPEVFPPFQNLENMLSLTRSEKAGQELIV*LFAAHPPLYFEARYQSSRHA*CVHSLCQTEQICARLD**PQSRH*HHIWRRCRKPQKLLPNTSYSDPPLDIALQRCDWCLAYISN*ARPPHAFQVLMQWL*SCNH*EGHKVENDLTLNTKFHIEATHFPQTSSSPHIPVL**SVSHGA*RRIRQSFHFLHKHFHQVASVWLGSKELDQLVIHFPRTTLFLPSK 1321 HPF F*LNLLEP V+Q L+I LQ SS*SSC + +QLQ QA+LS L * QKL +A A NR* SHHLS Q +TP F PFQNLE+ LSL S K GQE IV LF+AHPPL R QSS+H * LCQ E CAR **PQS H*+H R+C+ +KL +TS S+ LD ALQ CD A +* P H ++ + L*SC+H GHKVENDLT + +FH EAT + QTS+SPHI **S SH A* +IR SF LHKH+H AS G ++D IHF R + L SK Subject 3341 HPFPSLF*LNLLEPFWVKQRLRICLQTSS*SSCTESFYQLQRCQARLSTLEI*YQKLIFLRAMAWNR*TSHHLSHQLSPLANTPAAFQPFQNLESKLSLIHSLKGGQEQIVSLFSAHPPLCSAGRCQSSQHV*YARWLCQIELTCARQG**PQSPH*YHT*RKCQMLRKLQRDTSCSNHHLDTALQICDLWRACTGS*EHPLHVYRAQRR*L*SCSHLMGHKVENDLTASIRFHTEATRYLQTSNSPHILG***SASHDA*CKIRLSFRSLHKHYH*AASKRFGLTKMDLQEIHFQRKNVCLLSK 4255
Range 9: 4349 to 4651 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
98.2 bits(208) | 0.0 | 48/101(48%) | 0/101(0%) | Plus/Minus |
Query 11 NQQKRQSWSPF*SYRVILNQTSDLQTSGSPSCTYMTFLQATSIYRSVQHPK*LYLFENHMCFDKGHQQER*KRHCE*QEDIDRCNQEGIAELHQRSRNDQP 313 NQQ QSWSP *+ + QT D QTS S CT T+ Q SIY S Q P F +HMCFD+ HQQE+*K H D + + EG E HQ+ RN P Subject 4349 NQQMLQSWSPS*NDMAVWTQTLDSQTSDSQCCTCRTYPQVISIYHSAQLPVLRDPFGSHMCFDRDHQQEK*KHHFVWLTDKGQYSLEGTVEPHQK*RNGLP 4651
Range 10: 3461 to 4189 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
209.1 bits(450) | 0.0 | 133/243(55%) | 0/243(0%) | Minus/Plus |
Query 473 PYSALGTM*D*SL*HRNMR*AGSLGKMSGLYVEFCV*SQIIFNLVPLLMVA*LQPLHQHLEGVRWTCSITYVGQAPITSLKSYVKGGV*I*CIWQKLLRLSTSAPNVMSMARLRLLIQAGAYLLCLT*RMNTLGMSRRLVAGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLKGRKNFRGACWEV*LA**VMRNLTIQSLGLLECQLLTSSKEN*QLCLVHLELERVSYTRAS*RDLKEN 1201 PY ALG M* *SL +NMR* GSL SGL VE SQIIFNLVP M A* Q V+W T G IT LKS VK V* *CI KL + T A +V+SM RLR AGA L LT* + L M RRL + *RWMS EK ND LLT F * QR* FQVLKG K+ RG C *L **VMR+LTI S G E QLL S+ E+*Q CL LEL + TRA *R LK N Subject 3461 PYFALGIM*G*SLLPQNMR*VGSLEIASGLCVESYACSQIIFNLVPH*MAA*SQLSPLRSVDVKWMFLTTCAGPPQITYLKSCVKVVV*T*CISLKLSKHLTFALSVISMGRLRSSTLAGACQLYLT*PTSILDMLRRLATARRA*RWMS*EK*NDLLLTSFQ*MDQR*LTFQVLKGLKSCRGVC*GA*LV**VMRSLTIPSHGSQEYQLLISNLES*QSCLAPLELVKAFCTRAL*RGLKAN 4189
Range 11: 4466 to 4651 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
73.0 bits(153) | 0.0 | 36/62(58%) | 0/62(0%) | Minus/Plus |
Query 11 KAHMILKKIELFWVLNRAIY*GCLKESHIGTTWRAGGL*IRCLIQDYPVTSKRAP*LPLLLI 196 KAHM K+I +W L+R IY* L+ S GTT R GGL*I+CL D V S+RAP*L LLI Subject 4466 KAHMTPKRIAQYWELSRVIY*DYLRVSPTGTTLRVGGL*IQCLSPDCHVISRRAP*LQHLLI 4651
Nucleotide Sequence (443 letters)
Query ID: | ds2016-132_4 |
Query definition: | No definition line |
Query length: | 951 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
349.3 | 1838.8 | 24% | 1.665e-94 | 95% | AB277783.1 | |
346.6 | 1828.8 | 24% | 1.119e-93 | 88% | KX274275.1 | |
341.1 | 1637.6 | 26% | 5.06e-92 | 71% | AY368590.1 | |
327.3 | 1026.7 | 19% | 6.953e-88 | 52% | AF026278.1 | |
327.3 | 1034.5 | 19% | 6.953e-88 | 50% | JX559646.1 |
Alignments
Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OB1
Sequence ID: AB277783.1 Length: 2876 Number of Matches: 9
Range 1: 584 to 1024 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
349.3 bits(756) | 0.0 | 146/147(99%) | 0/147(0%) | Plus/Plus |
Query 2 WERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGIYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGR 442 WERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALS+WHGVIIMNNLVKALSTFEFVGIYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGR Subject 584 WERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHGVIIMNNLVKALSTFEFVGIYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGR 1024
Range 2: 584 to 1024 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
343.8 bits(744) | 0.0 | 142/147(97%) | 0/147(0%) | Minus/Minus |
Query 2 PPREVGSVGNAGRKGYETLVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*IIHNNHTMPNT*GLIYSFKQPRN*APHLVLISN*EPHTVVVCLNFLFIHHFN*QLAQPVGIGYLNCIVINAVLQVTHFTSNANSLP 442 PPREVGSVGNAGRKGYETLVLSDKFSY*T FTTTRNA+NNNWKSEHAINTHKLKRRQSFN*+IHNNHTMPNT*GLIYSFKQPRN*APHLV ISN*EPHTVVVC NFLFIHHFN*QLAQPVGIGYLNCIVINAVLQVTHFTSNANSLP Subject 584 PPREVGSVGNAGRKGYETLVLSDKFSY*TAFTTTRNAVNNNWKSEHAINTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQPRN*APHLVFISN*EPHTVVVCFNFLFIHHFN*QLAQPVGIGYLNCIVINAVLQVTHFTSNANSLP 1024
Range 3: 585 to 965 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
287.0 bits(620) | 0.0 | 121/127(95%) | 0/127(0%) | Minus/Minus |
Query 3 PQ*QVLLLNYFYHYQERYEQQLEI*ARYKYPQTQT*TKL*LNYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*LGTAHSCSVPQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFHEQCKFSP 383 PQ*QVLLLN FYHYQER EQQLEI*ARYKYPQTQT*TKL*L+YS**SHHAK+LRPNL*LQTTQKLSTSSC YF*LGTAHSCSV QLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFHEQCKFSP Subject 585 PQ*QVLLLNCFYHYQERCEQQLEI*ARYKYPQTQT*TKL*LSYS**SHHAKYLRPNL*LQTTQKLSTSSCVYF*LGTAHSCSVLQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFHEQCKFSP 965
Range 4: 958 to 1023 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
50.6 bits(104) | 0.0 | 22/22(100%) | 0/22(0%) | Minus/Minus |
Query 376 LPERLGVSGTPAVKAMKLSSSV 441 LPERLGVSGTPAVKAMKLSSSV Subject 958 LPERLGVSGTPAVKAMKLSSSV 1023
Range 5: 583 to 1023 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
292.0 bits(631) | 0.0 | 141/147(96%) | 0/147(0%) | Plus/Plus |
Query 1 LGENLHCS*NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*GTLQLCAVPS*K*AQDEVLNFWVV*SYRLGLKCLAWCDYYE*FS*SFVYV*VCGYL*RAQIXXXXXXXXXXX*K*FNKRTCH*GREFHSLYGRRSRHSQPLWE 441 LGENLHCS*NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS* TLQLCAVPS*K* QDEVLNFWVV*SYRLGLK LAWCDYYE* S*SFVYV*VCGYL*RAQISSCCS RSW*W*K FNKRTCH*GREFHSLYGRRSRHSQPLWE Subject 583 LGENLHCS*NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*STLQLCAVPS*K*TQDEVLNFWVV*SYRLGLKYLAWCDYYE*LS*SFVYV*VCGYL*RAQISSCCSQRSW*W*KQFNKRTCH*GREFHSLYGRRSRHSQPLWE 1023
Range 6: 585 to 827 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
184.4 bits(396) | 0.0 | 79/81(98%) | 0/81(0%) | Plus/Plus |
Query 3 GREFALLVKWVTWRTALITMQLRYPMPTGWASCQLK**MKRKLRHTTTVCGS*LEISTR*GAQFLGCLKL*IRP*VFGMV* 245 GREFALLVKWVTWRTALITMQLRYPMPTGWASCQLK**MKRKL+HTTTVCGS*LEI+TR*GAQFLGCLKL*IRP*VFGMV* Subject 585 GREFALLVKWVTWRTALITMQLRYPMPTGWASCQLK**MKRKLKHTTTVCGS*LEINTR*GAQFLGCLKL*IRP*VFGMV* 827
Range 7: 873 to 1025 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
94.5 bits(200) | 0.0 | 49/51(96%) | 0/51(0%) | Plus/Plus |
Query 291 WVFIACSDFQLLFIAFLXXXXXXXXENLSLRTRVS*PLRPAFPTLPTSLGG 443 WVFIACSDFQLLF AFLVVVK V**ENLSLRTRVS*PLRPAFPTLPTSLGG Subject 873 WVFIACSDFQLLFTAFLVVVKAV**ENLSLRTRVS*PLRPAFPTLPTSLGG 1025
Range 8: 583 to 876 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
211.4 bits(455) | 0.0 | 97/98(99%) | 0/98(0%) | Minus/Minus |
Query 1 PTNSNVDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISRAMQILSQ 294 PTNSNVDKALTKLFIIITPCQ LKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISRAMQILSQ Subject 583 PTNSNVDKALTKLFIIITPCQILKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISRAMQILSQ 876
Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome
Sequence ID: KX274275.1 Length: 8724 Number of Matches: 10
Range 1: 6328 to 6768 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
346.6 bits(750) | 0.0 | 144/147(98%) | 0/147(0%) | Plus/Plus |
Query 2 WERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGIYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGR 442 WERICIAREMGNLENCIDNYAIEVSYAYRLGEL+IEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVG+YSVLRFPVVVHSVPGSGKSSLIRELVTEDE+FIAFTAGVPDTPNLSGR Subject 6328 WERICIAREMGNLENCIDNYAIEVSYAYRLGELAIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELVTEDENFIAFTAGVPDTPNLSGR 6768
Range 2: 6328 to 6768 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
338.8 bits(733) | 0.0 | 141/147(96%) | 0/147(0%) | Minus/Minus |
Query 2 PPREVGSVGNAGRKGYETLVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*IIHNNHTMPNT*GLIYSFKQPRN*APHLVLISN*EPHTVVVCLNFLFIHHFN*QLAQPVGIGYLNCIVINAVLQVTHFTSNANSLP 442 PPREVG V NAGRKGYE LVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*+IHNNHTMPNT*GLIYSFKQPRN*APHLVLISN*EPHTVVVC NFLFIHHFN QLAQPVGIGYLNCIVINAVLQVTHFTSNANSLP Subject 6328 PPREVGCVRNAGRKGYEILVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQPRN*APHLVLISN*EPHTVVVCFNFLFIHHFNCQLAQPVGIGYLNCIVINAVLQVTHFTSNANSLP 6768
Range 3: 6329 to 6709 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
294.8 bits(637) | 0.0 | 123/127(97%) | 0/127(0%) | Minus/Minus |
Query 3 PQ*QVLLLNYFYHYQERYEQQLEI*ARYKYPQTQT*TKL*LNYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*LGTAHSCSVPQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFHEQCKFSP 383 PQ*QVLLLNYFYHYQERYEQQLEI*ARYK+PQTQT*TKL*L+YS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*LGTAHSCSV QLPLHSSFQL TRPACRHRIPQLHSYQCSSPGYPFHEQCKFSP Subject 6329 PQ*QVLLLNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*LGTAHSCSVLQLPLHSSFQLPTRPACRHRIPQLHSYQCSSPGYPFHEQCKFSP 6709
Range 4: 6702 to 6767 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.7 bits(100) | 0.0 | 21/22(95%) | 0/22(0%) | Minus/Minus |
Query 376 LPERLGVSGTPAVKAMKLSSSV 441 LPERLGVSGTPAVKAMK SSSV Subject 6702 LPERLGVSGTPAVKAMKFSSSV 6767
Range 5: 6327 to 6641 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
224.2 bits(483) | 0.0 | 101/105(96%) | 0/105(0%) | Plus/Plus |
Query 1 LGENLHCS*NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*GTLQLCAVPS*K*AQDEVLNFWVV*SYRLGLKCLAWCDYYE*FS*SFVYV*VCGYL*RAQI 315 LGENLHCS*NG*PGELH**LCN*GILCLQAGRV N*NDE*RGS* TLQLCAVPS*K*AQDEVLNFWVV*SYRLGLKCLAWCDYYE* S*SFVYV*VCG L*RAQI Subject 6327 LGENLHCS*NG*PGELH**LCN*GILCLQAGRVGN*NDE*RGS*STLQLCAVPS*K*AQDEVLNFWVV*SYRLGLKCLAWCDYYE*LS*SFVYV*VCGCL*RAQI 6641
Range 6: 6617 to 6769 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
88.6 bits(187) | 0.0 | 48/51(94%) | 0/51(0%) | Plus/Plus |
Query 291 WVFIACSDFQLLFIAFLXXXXXXXXENLSLRTRVS*PLRPAFPTLPTSLGG 443 WVFIACSDFQLLFIAFLVVVKVV**ENLSLRTR+S*PLRPAF T PTSLGG Subject 6617 WVFIACSDFQLLFIAFLVVVKVV**ENLSLRTRIS*PLRPAFLTHPTSLGG 6769
Range 7: 6329 to 6571 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
180.7 bits(388) | 0.0 | 79/81(98%) | 0/81(0%) | Plus/Plus |
Query 3 GREFALLVKWVTWRTALITMQLRYPMPTGWASCQLK**MKRKLRHTTTVCGS*LEISTR*GAQFLGCLKL*IRP*VFGMV* 245 GREFALLVKWVTWRTALITMQLRYPMPTGWAS QLK**MKRKL+HTTTVCGS*LEISTR*GAQFLGCLKL*IRP*VFGMV* Subject 6329 GREFALLVKWVTWRTALITMQLRYPMPTGWASWQLK**MKRKLKHTTTVCGS*LEISTR*GAQFLGCLKL*IRP*VFGMV* 6571
Range 8: 6675 to 6767 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
73.5 bits(154) | 0.0 | 29/31(94%) | 0/31(0%) | Plus/Plus |
Query 349 *K*FNKRTCH*GREFHSLYGRRSRHSQPLWE 441 *K*FNKRTCH*GREFHSLYGRRS H+QPLWE Subject 6675 *K*FNKRTCH*GREFHSLYGRRS*HTQPLWE 6767
Range 9: 6327 to 6620 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
210.5 bits(453) | 0.0 | 97/98(99%) | 0/98(0%) | Minus/Minus |
Query 1 PTNSNVDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISRAMQILSQ 294 PTNSNVDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISI NSPSL*A*DTSIA*LSMQFSRLPISRAMQILSQ Subject 6327 PTNSNVDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIANSPSL*A*DTSIA*LSMQFSRLPISRAMQILSQ 6620
Rupestris stem pitting associated virus strain Syrah, complete genome
Sequence ID: AY368590.1 Length: 8742 Number of Matches: 9
Range 1: 6328 to 6768 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
341.1 bits(738) | 0.0 | 143/147(97%) | 0/147(0%) | Plus/Plus |
Query 2 WERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGIYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGR 442 WERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWH IIMNNLVKALSTFEFVG+YSVLRFPVVVHSVPGSGKSSLIREL+TEDESFIAFTAGVPDTPNLSGR Subject 6328 WERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHY*IIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGVPDTPNLSGR 6768
Range 2: 6328 to 6768 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
298.4 bits(645) | 0.0 | 125/147(85%) | 0/147(0%) | Minus/Minus |
Query 2 PPREVGSVGNAGRKGYETLVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*IIHNNHTMPNT*GLIYSFKQPRN*APHLVLISN*EPHTVVVCLNFLFIHHFN*QLAQPVGIGYLNCIVINAVLQVTHFTSNANSLP 442 PPR+V SVGNAGR+ YETLV S++ SY TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*+IHNN MPNT*GLIYSFKQ RN*A HLVLISN EPHTVVV NFLFIHHFN*QLAQPVGIG+LNCI+INA+ QV HFTSNANSLP Subject 6328 PPRKVWSVGNAGRESYETLVFSNELSYQTTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNLIMPNT*GLIYSFKQSRN*ASHLVLISNQEPHTVVVRFNFLFIHHFN*QLAQPVGIGHLNCIIINAIFQVAHFTSNANSLP 6768
Range 3: 6329 to 6706 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
254.9 bits(550) | 0.0 | 108/126(86%) | 0/126(0%) | Minus/Minus |
Query 3 Q*QVLLLNYFYHYQERYEQQLEI*ARYKYPQTQT*TKL*LNYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*LGTAHSCSVPQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFHEQCKFSP 380 Q* LL NYFYHYQERYEQQLEI*ARYK+PQTQT*TKL*L+YS**S++AKHLRPNL*LQT QKLS SSCAYF* GTAHSCS QLPLHSSFQLTTRP CRHR PQLH+YQC+ PG PFHEQCKFSP Subject 6329 Q**ALLSNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SNNAKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQLPLHSSFQLTTRPTCRHRTPQLHNYQCNFPGCPFHEQCKFSP 6706
Range 4: 6702 to 6767 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.7 bits(100) | 0.0 | 21/22(95%) | 0/22(0%) | Minus/Minus |
Query 376 LPERLGVSGTPAVKAMKLSSSV 441 LPER GVSGTPAVKAMKLSSSV Subject 6702 LPERFGVSGTPAVKAMKLSSSV 6767
Range 5: 6327 to 6641 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
204.5 bits(440) | 0.0 | 92/105(88%) | 0/105(0%) | Plus/Plus |
Query 1 LGENLHCS*NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*GTLQLCAVPS*K*AQDEVLNFWVV*SYRLGLKCLAWCDYYE*FS*SFVYV*VCGYL*RAQI 315 LGENLHCS*NG PG+LH**LCN*G+LCLQ GRVVN*NDE*RGS* LQLCAVP *K*AQDE+LNFW+V*SYRLGLKCLA DYYE* S*SFVYV*VCG L*RAQI Subject 6327 LGENLHCS*NGQPGKLH**LCN*GVLCLQVGRVVN*NDE*RGS*SALQLCAVPG*K*AQDEMLNFWIV*SYRLGLKCLALLDYYE*LS*SFVYV*VCGCL*RAQI 6641
Range 6: 6617 to 6769 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
73.9 bits(155) | 0.0 | 43/51(84%) | 0/51(0%) | Plus/Plus |
Query 291 WVFIACSDFQLLFIAFLXXXXXXXXENLSLRTRVS*PLRPAFPTLPTSLGG 443 WVFIACSDFQLLFIAFLVVVKVV**E+ L+TRVS* RPAFPTL T LGG Subject 6617 WVFIACSDFQLLFIAFLVVVKVV**ESSLLKTRVS*LSRPAFPTLQTFLGG 6769
Range 7: 6327 to 6620 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
203.6 bits(438) | 0.0 | 95/98(97%) | 0/98(0%) | Minus/Minus |
Query 1 PTNSNVDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISRAMQILSQ 294 PTNSNVDKALTKLFIII CQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSP+L*A*DTSIA*LSMQFSRLPISRAMQILSQ Subject 6327 PTNSNVDKALTKLFIII**CQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSMQFSRLPISRAMQILSQ 6620
Range 8: 6329 to 6568 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
157.8 bits(338) | 0.0 | 68/80(85%) | 0/80(0%) | Plus/Plus |
Query 3 GREFALLVKWVTWRTALITMQLRYPMPTGWASCQLK**MKRKLRHTTTVCGS*LEISTR*GAQFLGCLKL*IRP*VFGMV 242 GREFALLVKW TW+ ALI MQLR PMPTGWASCQLK**MKRKL+ TTTVCGS LEISTR* AQFL CLKL*IRP*VFG++ Subject 6329 GREFALLVKWATWKIALIIMQLRCPMPTGWASCQLK**MKRKLKRTTTVCGSWLEISTR*DAQFLDCLKL*IRP*VFGII 6568
Grapevine Rupestris stem pitting associated virus, complete genome
Sequence ID: AF026278.1 Length: 8725 Number of Matches: 8
Range 1: 6328 to 6768 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
327.3 bits(708) | 0.0 | 133/147(90%) | 0/147(0%) | Plus/Plus |
Query 2 WERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGIYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGR 442 WERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMM EEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALS+WH + IMNNLVKALSTFEFVG++SVL+FPVV+HSVPGSGKSSLIREL++EDE+FIAFTAGVPD+PNL+GR Subject 6328 WERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHYLSIMNNLVKALSTFEFVGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGR 6768
Range 2: 6327 to 6620 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
164.2 bits(352) | 0.0 | 79/98(81%) | 0/98(0%) | Minus/Minus |
Query 1 PTNSNVDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISRAMQILSQ 294 PTNSNVD ALTKLFII+ CQ LKA*SIASN PEIEHLILCLFLT+N TQL* ASTSSS IIS+D+SPS A*+TSIA*LS+QFSRLPIS AM I SQ Subject 6327 PTNSNVDNALTKLFIILK*CQILKA*SIASNRPEIEHLILCLFLTKNLTQL*WASTSSSVIISMDSSPSRYA*ETSIA*LSIQFSRLPISLAMHIRSQ 6620
Range 3: 6705 to 6767 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
42.3 bits(86) | 0.0 | 18/21(86%) | 0/21(0%) | Minus/Minus |
Query 379 LPERLGVSGTPAVKAMKLSSS 441 LP RLG+SGTPAVKAMK SSS Subject 6705 LPVRLGLSGTPAVKAMKFSSS 6767
Range 4: 6328 to 6768 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
167.4 bits(359) | 0.0 | 78/147(53%) | 0/147(0%) | Minus/Minus |
Query 2 PPREVGSVGNAGRKGYETLVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*IIHNNHTMPNT*GLIYSFKQPRN*APHLVLISN*EPHTVVVCLNFLFIHHFN*QLAQPVGIGYLNCIVINAVLQVTHFTSNANSLP 442 P E+ +V N + YE L+L + Y*TTFTTTR+ MN+ WK +H NT+KLK Q FN*IIHN MPNT*GLI FK N*A HL+L+ + E +T+++ L+F HHFN L+QPV IG L I++N +LQVTH SNA LP Subject 6328 PSCEIRAVWNTCCESYEILILGN*LPY*TTFTTTRHTMNDYWKFKHTENTYKLKC*QCFN*IIHNTQIMPNT*GLINRFK*A*N*ASHLMLVPDQESNTIIMGLHFFLGHHFNG*LSQPVRIGDLYRIIVNTILQVTHLPSNAYPLP 6768
Range 5: 6329 to 6691 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
119.3 bits(254) | 0.0 | 66/121(55%) | 0/121(0%) | Minus/Minus |
Query 3 LLNYFYHYQERYEQQLEI*ARYKYPQTQT*TKL*LNYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*LGTAHSCSVPQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFHEQCKFSP 365 LLNYFYHYQ YE LEI*A K+ QTQ T L*LNYS* S++AK+LRPN LQ KLS SS A * H+ + P L SSFQ PA HR P H+ Q +SPGYP QC +P Subject 6329 LLNYFYHYQAHYE*LLEI*AH*KHLQTQMLTML*LNYS*YSNNAKYLRPNQSLQIGLKLSISSYACS*PRI*HNYNGPPLLPRSSFQWIALPAGTHRRPLSHNCQYNSPGYPSP*QCISAP 6691
Range 6: 6327 to 6617 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.4 bits(215) | 0.0 | 53/97(55%) | 0/97(0%) | Plus/Plus |
Query 1 LGENLHCS*NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*GTLQLCAVPS*K*AQDEVLNFWVV*SYRLGLKCLAWCDYYE*FS*SFVYV*VC 291 LG ++HC +G*PGEL+* LC+ G+LC+ AGR ++*ND+ S G L LC + + A DE+LNF +*S LGLK LA +YYE*FS*S V +*VC Subject 6327 LGADMHC*GDG*PGELY*QLCDRGLLCVPAGRAIH*NDDRGRSGGPL*LC*ILGQEQA*DEMLNFRPI*SD*LGLKYLALFEYYE*FS*SIVNI*VC 6617
Range 7: 6675 to 6746 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
26.7 bits(52) | 0.0 | 14/24(58%) | 0/24(0%) | Plus/Plus |
Query 349 *K*FNKRTCH*GREFHSLYGRRSR 420 *K*FNK G EFHS + R SR Subject 6675 *K*FNKGANFRG*EFHSFHSRCSR 6746
Range 8: 6329 to 6571 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.0 bits(164) | 0.0 | 42/81(52%) | 0/81(0%) | Plus/Plus |
Query 3 GREFALLVKWVTWRTALITMQLRYPMPTGWASCQLK**MKRKLRHTTTVCGS*LEISTR*GAQFLGCLKL*IRP*VFGMV* 245 G +ALL +WVTWR L M+ R PM TGW S LK** ++K R V S S R* AQF LK IRP*VFG++* Subject 6329 GSGYALLGRWVTWRIVLTIMR*RSPMRTGWESYPLK**PRKKWRPIIIVLDSWSGTSIR*DAQFQAYLKRLIRP*VFGII* 6571
Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome
Sequence ID: JX559646.1 Length: 8726 Number of Matches: 8
Range 1: 6328 to 6768 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
327.3 bits(708) | 0.0 | 131/147(89%) | 0/147(0%) | Plus/Plus |
Query 2 WERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGIYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGR 442 WERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMM EEEVEAHYNCVRFLVRNKHKMRCSISGLFEA+D*ALS+WH + IMNNLVKALSTFEF+G++SVL+FPVV+HSVPGSGKSSLIREL++EDESF+AFTAGVPD+PNL+GR Subject 6328 WERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAVD*ALSIWHCLSIMNNLVKALSTFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGR 6768
Range 2: 6327 to 6620 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
169.2 bits(363) | 0.0 | 80/98(82%) | 0/98(0%) | Minus/Minus |
Query 1 PTNSNVDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISRAMQILSQ 294 P NS VD ALTKLFII+ CQ LKA*S ASN PEIEHLILCLFLTRN TQL*CASTSSS IIS+D+SP+L A*DTSIA*LSMQFSRLPIS AM I SQ Subject 6327 PINSKVDNALTKLFIILKQCQILKA*STASNRPEIEHLILCLFLTRNLTQL*CASTSSSVIISMDSSPNLYA*DTSIA*LSMQFSRLPISLAMHIRSQ 6620
Range 3: 6705 to 6767 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
41.4 bits(84) | 0.0 | 18/21(86%) | 0/21(0%) | Minus/Minus |
Query 379 LPERLGVSGTPAVKAMKLSSS 441 LP RLG+SGTPAVKA KLSSS Subject 6705 LPVRLGLSGTPAVKATKLSSS 6767
Range 4: 6328 to 6768 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
171.1 bits(367) | 0.0 | 80/147(54%) | 0/147(0%) | Minus/Minus |
Query 2 PPREVGSVGNAGRKGYETLVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*IIHNNHTMPNT*GLIYSFKQPRN*APHLVLISN*EPHTVVVCLNFLFIHHFN*QLAQPVGIGYLNCIVINAVLQVTHFTSNANSLP 442 P EV ++ N + +ETLVL D Y*TT TT R M N+WK +H NT+K + Q FN IIHN TMPNT*GLI FK N*APHL+L+ N*EPHT+VVCL+ L HHF+ L Q + IG+L I+INAVL + H + A SLP Subject 6328 PSCEVRTIWNTCCESHETLVL*D*LPY*TTLTTARYTMYNDWKFKHTENTYKFEG*QCFNQIIHNTQTMPNT*GLINRFK*A*N*APHLMLVPN*EPHTIVVCLHLLLCHHFDG*LTQSICIGHLYRIIINAVL*IAHLSGYAYSLP 6768
Range 5: 6329 to 6691 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
118.8 bits(253) | 0.0 | 64/121(53%) | 0/121(0%) | Minus/Minus |
Query 3 LLNYFYHYQERYEQQLEI*ARYKYPQTQT*TKL*LNYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*LGTAHSCSVPQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFHEQCKFSP 365 LLNY YH Q Y +LEI*A K+ + T L* NYS* S++AK+LRPN LQ KLSTSS A *LGT+H+CSVP P SSF+ P HR P H+YQCSS P C F+P Subject 6329 LLNYSYHCQVHYV*RLEI*AH*KHL*IRRLTML*PNYS*YSNNAKYLRPNQPLQIGLKLSTSSYACS*LGTSHNCSVPPPPPLSSFRWIAHPIYMHRTPLSHNYQCSSLDCPSLWLCIFAP 6691
Range 6: 6327 to 6602 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
99.1 bits(210) | 0.0 | 52/92(57%) | 0/92(0%) | Plus/Plus |
Query 1 LGENLHCS*NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*GTLQLCAVPS*K*AQDEVLNFWVV*SYRLGLKCLAWCDYYE*FS*SFV 276 LG N+H +G ELH**LC+ G+LC+ G ++ ND+ G GTLQLC VPS*+ A DEVLNF +*S LGLK LA +YYE*F *S V Subject 6327 LGANMHSQRDGQSRELH**LCDRGVLCI*IG*AIHRNDDRGGGGGTLQLCEVPS*EQA*DEVLNFRPI*SG*LGLKYLALFEYYE*FG*SIV 6602
Range 7: 6675 to 6758 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
24.0 bits(46) | 0.0 | 14/28(50%) | 0/28(0%) | Plus/Plus |
Query 349 *K*FNKRTCH*GREFHSLYGRRSRHSQP 432 *+*FNK GREF + R SR S P Subject 6675 *E*FNKGVNLRGREFRGFHSRCSR*S*P 6758
Range 8: 6329 to 6571 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
83.5 bits(176) | 0.0 | 46/81(57%) | 0/81(0%) | Plus/Plus |
Query 3 GREFALLVKWVTWRTALITMQLRYPMPTGWASCQLK**MKRKLRHTTTVCGS*LEISTR*GAQFLGCLKL*IRP*VFGMV* 245 G E+A +W RTALI M+ R PM W S K** +R+ RHTT V GS*L S R*GAQF LK IRP*VFG+V* Subject 6329 GSEYA*PERWAI*RTALIIMR*RCPMHIDWVSYPSK**QRRRWRHTTIV*GS*LGTSIR*GAQFQAYLKRLIRP*VFGIV* 6571
Nucleotide Sequence (1147 letters)
Query ID: | ds2016-132_4 |
Query definition: | No definition line |
Query length: | 951 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
604.1 | 2794.0 | 31% | 1.182e-170 | 45% | KT948710.1 | |
604.1 | 2784.4 | 30% | 1.182e-170 | 46% | KX958435.1 | |
898.7 | 5039.5 | 35% | 0 | 96% | AB277783.1 | |
892.7 | 5017.5 | 35% | 0 | 96% | KX274275.1 | |
832.7 | 4618.3 | 35% | 0 | 88% | AY368590.1 |
Alignments
Grapevine rupestris stem pitting associated virus isolate VF1, partial genome
Sequence ID: KT948710.1 Length: 8716 Number of Matches: 14
Range 1: 6707 to 7852 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
604.1 bits(1312) | 0.0 | 263/382(69%) | 0/382(0%) | Minus/Plus |
Query 2 EDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPVDDWLGHWLGAAFPKKVKFAILRGQHTSISTWRAL*GRHQKHNILWSQTVIPKLWAFWSV*EFCAFNNCNSINGLHICTICLEFWFL*ALQLQP*SLHMSTAIMVIIMVVS*GLQGSQY*LRIVAQVRRLLQQLRKCWEV*RL*GLAXXXXXXXXXXXXXIWRAHQEGCQVSQMKLLRPD*NLWSWQG 1147 EDESF+AFTAGVPD+PNL+GRYIKPYSPGC V+GKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIK+KTCRFG NTCKYL SFGF++HSDR D V+ GSPFELDVEGVLICFGKEAVDLA AHNSDFKLPCEVRG+TF+VVTLLKSRDPTS+DKHWFY+AATRHR KLIIMQ*+AF ATC+LG +++ ++ W GHW+G+ +KVKFAI R QH+ +ST AL GRH+++N+LWS VIPK WSV +F FN H C I LEFW * LQL SLHM TA++V I VS* GSQY*L+I Q R L QL++CW V*RL*GLA + KLI +V V W+ E C SQMK ++PD L S QG Subject 6707 EDESFVAFTAGVPDSPNLTGRYIKPYSPGCVVQGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKTKTCRFGANTCKYLQSFGFDVHSDRVDAVVIGSPFELDVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFNVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*DAFPATCQLG*DHNSINHWPGHWIGSTLLEKVKFAIFR*QHSPVSTRGALQGRHKEYNLLWS*AVIPKFRDIWSVRKFRTFNTSRDSGRFHTCIISLEFWS**ELQLPSKSLHM*TAVVVTIKAVS*EPPGSQY*LKIADQARP*LLQLKRCWVV*RL*GLAKKLMKLITVVERVKWQVKLESCLASQMKHMKPDLRL*S*QG 7852
Range 2: 6709 to 7272 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
303.9 bits(657) | 0.0 | 136/188(72%) | 0/188(0%) | Plus/Minus |
Query 582 PNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLIF*YGSENNTSKPEMSLTDRYSSSMFIFPFTAQPGEYGLMYLPERLGVSGTPAVKAMKLSS 1145 P+ QVA KA HC++I+ CLVAA *NQCLSSEVGSLDFN VTT NV PRTSQG+LKSELCA A+STAS PKQ+ TPSTS+SNG+P+ T+S LSL KPKD RYL V +PNLQV FMK ASLGTL+F GSEN+TSKPE+S TDRYSSS+FIFP T PGE GLMYLP R G+SGTPAVKA K SS Subject 6709 PSWQVAGKASHCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTLNVEPRTSQGNLKSELCATARSTASFPKQMRTPSTSSSNGDPITTASTLSL*TSKPKDWRYLQVLAPNLQVLVFMKCASLGTLMFW*GSENSTSKPEISETDRYSSSIFIFPCTTHPGE*GLMYLPVRFGLSGTPAVKATKDSS 7272
Range 3: 7533 to 7853 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
173.8 bits(373) | 0.0 | 83/107(78%) | 0/107(0%) | Plus/Minus |
Query 1 ALASSKDFSLASKASFDSPGNLPGGLAI*QC*Q**SISSPIWLTPKAFKPPSTSLTVEASASLGPQFSINIDSPVALMRQP*LSPLLLSTCARIRVAIAAPTRTRIP 321 ALA+SK SLAS ASFDSPGN P LAI* Q *SISS WLTPKAF+PP+TSLTV A ASLGPQFSI+IDSPVALM+QP* PLLLSTCARI +AIA PTRTRIP Subject 7533 ALANSKALSLASYASFDSPGNFPI*LAI*LFQQL*SISSTFWLTPKAFRPPNTSLTVAARASLGPQFSISIDSPVALMKQP*WLPLLLSTCARIWMAIATPTRTRIP 7853
Range 4: 7297 to 7491 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.9 bits(168) | 0.0 | 35/65(54%) | 0/65(0%) | Plus/Minus |
Query 363 LLKAQNSQTDQKAQSLGMTVWDHNMLCFWCRPYNALHVEIDVCCPLSMANLTFLGNAAPSQCPSQ 557 +LK +N TDQ + +LGMT DHN L CRP NA VE CC L+MANLTF + P QCP Q Subject 7297 VLKVRNFLTDQISLNLGMTA*DHNRLYSLCRPCNAPRVETGECCHLNMANLTFSRSVEPIQCPGQ 7491
Range 5: 6707 to 7657 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
386.9 bits(838) | 0.0 | 180/317(57%) | 0/317(0%) | Plus/Minus |
Query 197 NSQLILTPL*PL*DNHDYHHYCCRHVXXXXXXXXXXXEPEFQTDSTYMEAVNTITIIKGTKFSD*PKSPELGNDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMPKPIVNGVIVLAQFAGC*KGISLHDDQFLPMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSYLTRKFEIGIMRSR*INCLLAKAN*HTLNIQLKWRTCNHFIRPVTMQIKTKGQKVLTCIFTKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYLPFYSTTRRVWLDVPPREVGSVGNAGRKGYETLVL 1147 N Q +LTP L*++ D +HYCC HVQG G QLQ L PEFQ D+ M+A T IKGTKFSD*P PELGNDCLGPQ V+L VPSL* PPCGN MLSPEYGKFDFL+KC T PMP+P+VNGV+VLAQ AGC KGISLH F M CC NVEP+L+ +P Q* NN+KC T +L + E+ I+R+ *I LL+KAN ++LNIQ KWR N+ + +TM I+ K +VL + TK A LYEV LPWN D+L+ V + H+KTRN+ RQ+LIKY+YLP + T RV LDVP ++ +V K ++ LVL Subject 6707 NFQSVLTPRWLL*NSLDGYHYCCLHVQGFGWQLQLLLGPEFQRDNACMKATRVTTSIKGTKFSD*PNIPELGNDCLGPQ*VILFVPSL*CPPCGNW*MLSPEYGKFDFLKKCRTNPMPRPMVNGVMVLAQLAGCWKGISLHYY*FASMPCCCNVEPMLVF*SWVPRLQ*RNNVKC*TPHLAGQLEVRIVRNC*IYSLLSKANENSLNIQFKWRPYNNCVHSITMNIEAKRLEVLAGVSTKPASFGLYEVCLPWNADVLVGV*EQHIKTRNIRDRQVLIKYIYLPLHYTPWRVGLDVPSCKIWTVWYTRCKSHKRLVL 7657
Range 6: 7706 to 7852 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.2 bits(112) | 0.0 | 25/49(51%) | 0/49(0%) | Plus/Minus |
Query 2 PLPAPKISVWPQKLHLTHLATFLVGSPYDNVNNDNQFLHQYG*PLKPSN 148 PL K VW LHLT ATF P+++ NN NQF +G*PLKPS+ Subject 7706 PLLTLKP*VWLHMLHLTRQATFQFDLPFNSFNNCNQFHQLFG*PLKPSD 7852
Range 7: 7516 to 7851 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
199.5 bits(429) | 0.0 | 88/112(79%) | 0/112(0%) | Minus/Plus |
Query 3 YMYYLFGILVLVGAAIATLILAHVDSNNGDNHGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HCHMASPPGRLPGESNEAFEARLKSLELAR 338 YM+YLFGILVLVG AIA ILAHVDS++G++ GC IRATGESILIENCGPSEALA+TVKEVLGGLKALGVS +EIDY C* MAS G+LPGESNEA+EARLK+LELAR Subject 7516 YMHYLFGILVLVGVAIAIQILAHVDSSSGNHQGCFIRATGESILIENCGPSEALAATVKEVLGGLKALGVSQKVDEIDYSC*KS*MASQIGKLPGESNEAYEARLKALELAR 7851
Range 8: 7006 to 7458 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
157.8 bits(338) | 0.0 | 78/151(52%) | 0/151(0%) | Minus/Plus |
Query 396 SDYRFAI*VGC*GCANLLWQGGS*FSGCA*FRFQTSL*GTRCYI*CCYLIEIKGSDLR**ALVLHCCNKT*EEIDHHAVKCLFSNLRIGPKLSPR*RLAWALAWCCIS*ESQICHTQGTTYINFHMEGVIGTAPKA*HIVVPNSHSQALGF 848 S YR AI* GC*G ++LLW+GG S CA F Q +L G I* CY+IE+ G + R ALVL C NK ++ +++AV+CL SNL G + * LAWAL W S*ESQICH Q TT+ +FH G+ GTA + * IVV SHSQ G+ Subject 7006 SCYRVAI*TGC*GSSHLLWKGGCRSSSCAQF*LQVALRGAGFNI*RCYVIEV*GPNFRRQALVLRCSNKASKQTNNNAVRCLSSNLPTGLRP*LH*PLAWALDWFYTS*ESQICHIQVTTFTSFHTGGITGTAQRV*PIVVLGSHSQVQGY 7458
Range 9: 6709 to 6975 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.0 bits(214) | 0.0 | 43/89(48%) | 0/89(0%) | Minus/Plus |
Query 879 GREFHSLYGRRSRHSQPLWEVHQAILSWLCCKREDKHT**VSVCK*HFWF*RVIF*PISKYQCSKGGSLHKVKDLQIW*KYM*VPSVLW 1145 GR F Y +R S+ +VHQA+LS +C REDK+T**V VC *+FWF* + P+ ++Q SKGG+LHK ++LQ+W ++ VP + W Subject 6709 GRVFCGFYSGCTRQSKSYRKVHQALLSRVCSAREDKYT**VPVCL*YFWF*CAVLRPLPEHQRSKGGTLHKDQNLQVWC*HLQVPPIFW 6975
Range 10: 7119 to 7853 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
323.2 bits(699) | 0.0 | 169/245(69%) | 0/245(0%) | Minus/Plus |
Query 1 RYEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIGRN*SSCSEMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPKQSFPSSGLFGQSENFVPLIIVIVLTASIYVLSVWNSGSXXXXXXXXXXXXXRQQ*W**SWLSHKGYRGVNIN*ELWPK*GACFNS*GSAGRFEGFRG*PYW*RN*LSLLTLSYGEPTRKVAR*VK*SF*GQTEIFGAGKG 735 R V HL LL Y*+ G + S GSTL QQ I N* CSEMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGG YRDGTKSITYCGP+QSFPSSG+FGQSENFVPLI+V+ L A I+ LS+WNSG R CNC+PNPCTCRQQ*W* S L HK +RGVN +*+L K G S* G EGFRG*P * N*L LL G+ KVA VK*S * QT F KG Subject 7119 RCGVQHLTLLRY*SLGTQLQKTSIGSTLQQQGIEAN***CSEMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGHYRDGTKSITYCGPRQSFPSSGIFGQSENFVPLILVVTLVAFIHALSLWNSGPSRSCNCHPNPCTCRQQ*W*PSRLFHKSHRGVNTD*KLRTKRGPSCYS*RGVGWSEGFRG*PKS**N*LQLLKELNGKSNWKVAWRVK*SI*SQT*GFRVSKG 7853
Range 11: 6708 to 7058 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.4 bits(167) | 0.0 | 53/117(45%) | 0/117(0%) | Minus/Plus |
Query 796 RTRVS*PLRPAFPTLPTSLGGTSSHTLLVVL*KGR*TYLMSICL*VTFLVLTCYFLTHIKISVFQGRLTS*SQRPADLVKIHVSTFCPLVLICIVTGLMK*LQVRHLSWMLRVC*FA 1146 RT + L+ + T+ GTSS TL V KGR* YLMS CL + FLVL C T + S FQGR TS* + A LV ST L + IV + L RHL+WMLR FA Subject 6708 RTSLLWLLQRVYQTVQILQEGTSSPTLQGV*CKGR*IYLMSTCLSLIFLVLMCCSQTPTRTSAFQGRHTS*RPKLAGLVLTPASTSNLLASMFIVIEWTQLL*GRHLNWMLREFSFA 7058
Range 12: 6768 to 7271 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
141.3 bits(302) | 0.0 | 79/168(47%) | 0/168(0%) | Plus/Minus |
Query 583 PIRRLLKRHFTA**SISSYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLVPHKEV*NRNYAQPLNQLPPCQSKLAHPQHPTQMANL*SLHQTCHYAN*NQRTEGTYMYFHQICRSLTL*SEPPLEH*YFDMGQKITRQNQKCHLQTDTHQVCLSSLLQHNQESMA*CT 1086 P+ RLL+RH TA + LL Q RT+A + P SI *Q M + P + *++N AQ L+ PP QSK PQHP QMA L* L HY + +Q+ GT HQ C+ +L*S PPLE * G + QNQK QT THQV LSSL H ES A*CT Subject 6768 PVGRLLERHLTALLLVCFDALLLQRRTNACLLKLGP*TSIT*QR*MLNPAPRRAT*SQNCAQLLDLQPPFQSK*ELPQHPVQMATL*QLRPLYHYEHRSQKIGGTCRC*HQTCKFWSL*SVPPLER*CSGRGLRTAHQNQKYQRQTGTHQVYLSSLALHTLESRA*CT 7271
Range 13: 7516 to 7851 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
125.2 bits(267) | 0.0 | 57/112(51%) | 0/112(0%) | Plus/Minus |
Query 3 PCQLQRFQSGLKSFI*LTWQPSWWARHMTMLTMIINFFTNMANP*SLQTSQHFLNC*SKRLTWATILN*Y*LPCSPYETTMIITIIAVDMCKD*GCNCSAYKNQNSKQIVHI 338 PC L +SG FI*L Q S H+T+ T +INF +ANP*SLQT+QH NC S L W+ I N Y*LP YET +++T AV MCKD NC++Y +QNSK+I+H+ Subject 7516 PC*L*SLKSGFICFI*LARQLSNLTCHLTLSTTVINFINFLANP*SLQTTQHLFNCSS*GLAWSAIFNQY*LPGGSYETALMVTTTAVYMCKDLDGNCNSY*DQNSKEIMHV 7851
Range 14: 7323 to 7481 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
63.8 bits(133) | 0.0 | 30/53(57%) | 0/53(0%) | Plus/Minus |
Query 373 HKILRLTKKPRAWE*LFGTTICYAFGAVPITPSMWKLMYVVP*VWQI*LS*EM 531 ++I LTK P WE*L TTI Y AVP+ P +WKL+ VV *+WQI*LS E+ Subject 7323 YEIF*LTKYP*TWE*LPRTTIGYTLCAVPVMPPVWKLVNVVT*IWQI*LSQEV 7481
Grapevine rupestris stem pitting associated virus isolate CS BR, complete genome
Sequence ID: KX958435.1 Length: 8743 Number of Matches: 14
Range 1: 6707 to 7852 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
604.1 bits(1312) | 0.0 | 262/382(69%) | 0/382(0%) | Minus/Plus |
Query 2 EDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPVDDWLGHWLGAAFPKKVKFAILRGQHTSISTWRAL*GRHQKHNILWSQTVIPKLWAFWSV*EFCAFNNCNSINGLHICTICLEFWFL*ALQLQP*SLHMSTAIMVIIMVVS*GLQGSQY*LRIVAQVRRLLQQLRKCWEV*RL*GLAXXXXXXXXXXXXXIWRAHQEGCQVSQMKLLRPD*NLWSWQG 1147 EDESF+AFTAGVPD+PNL+GRYIKPYSPGCAV+G+INILDEYLSVSDISGFDVLFSDPYQNI++PREAHFIK+KTCRFG NTCKYL SFGF+++SDR D V+ GSPFELDVEGVLICFGKEAVDLA AHNSDFKLPCEVRG+TF+VVTLLKSRDPTS+DKHWFY+AATRHR KLIIMQ*+AF ATC+LG +++ ++ WLGHW+G+ +KV+FAI R Q++ +ST RAL GRH+++N+LWS VIPK WSV +F AF+ H C I LEFW * LQL SLHM TA++V I VS* GSQY*L+IV Q R L QL++CW V*RL*GLA + KLI +V V WR E C SQMK ++PD L S QG Subject 6707 EDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGRINILDEYLSVSDISGFDVLFSDPYQNINIPREAHFIKTKTCRFGANTCKYLQSFGFDIYSDRVDAVVVGSPFELDVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFNVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*DAFPATCQLG*DHNSINHWLGHWIGSTLLEKVEFAIFR*QYSPVSTRRALQGRHKEYNLLWS*AVIPKFRDIWSVRKFRAFDTGCDSGRFHTCIIFLEFWS**ELQLPSKSLHM*TAVVVTIKAVS*EPPGSQY*LKIVGQARP*LLQLKRCWVV*RL*GLAKKLMKLITVVERVKWRVKLESCLASQMKHMKPDLRL*S*QG 7852
Range 2: 6709 to 7272 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
297.1 bits(642) | 0.0 | 135/188(72%) | 0/188(0%) | Plus/Minus |
Query 582 PNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLIF*YGSENNTSKPEMSLTDRYSSSMFIFPFTAQPGEYGLMYLPERLGVSGTPAVKAMKLSS 1145 P+ QVA KA HC++I+ CLVAA *NQCLSSEVGSLDFN VTT NV PRTSQG+LKSELCA A+STAS PKQI TPSTS+S G+P T+S LSL KPKD RYL V +PNLQV FMK ASLG L+F GSEN+TSKPEMS TD+YSSS+FI P TA PGE GLMYLP R G+SGTPAVKA K SS Subject 6709 PSWQVAGKASHCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTLNVEPRTSQGNLKSELCATARSTASFPKQIRTPSTSSSKGDPTTTASTLSL*ISKPKDWRYLQVLAPNLQVLVFMKCASLGMLMFW*GSENSTSKPEMSETDKYSSSIFILPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSS 7272
Range 3: 7533 to 7853 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
171.1 bits(367) | 0.0 | 82/107(77%) | 0/107(0%) | Plus/Minus |
Query 1 ALASSKDFSLASKASFDSPGNLPGGLAI*QC*Q**SISSPIWLTPKAFKPPSTSLTVEASASLGPQFSINIDSPVALMRQP*LSPLLLSTCARIRVAIAAPTRTRIP 321 ALA+SK SLAS ASFDSPGN P LAI* Q *SISS WLTPKAF+PP+TSLTV A ASLGPQFSI+IDSPVALM+QP* PLLLSTCARI +AIA PT TRIP Subject 7533 ALANSKALSLASYASFDSPGNFPI*LAI*LFQQL*SISSTFWLTPKAFRPPNTSLTVAARASLGPQFSISIDSPVALMKQP*WLPLLLSTCARIWMAIATPTMTRIP 7853
Range 4: 7297 to 7485 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
76.7 bits(161) | 0.0 | 35/63(56%) | 0/63(0%) | Plus/Minus |
Query 369 KAQNSQTDQKAQSLGMTVWDHNMLCFWCRPYNALHVEIDVCCPLSMANLTFLGNAAPSQCPSQ 557 KA+N TDQ + +LGMT DHN L CRP NAL VE C L+MAN TF + P QCPSQ Subject 7297 KARNFLTDQISLNLGMTA*DHNRLYSLCRPCNALRVETGEYCHLNMANSTFSRSVEPIQCPSQ 7485
Range 5: 6707 to 7660 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
384.1 bits(832) | 0.0 | 183/318(58%) | 0/318(0%) | Plus/Minus |
Query 194 HNSQLILTPL*PL*DNHDYHHYCCRHVXXXXXXXXXXXEPEFQTDSTYMEAVNTITIIKGTKFSD*PKSPELGNDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMPKPIVNGVIVLAQFAGC*KGISLHDDQFLPMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSYLTRKFEIGIMRSR*INCLLAKAN*HTLNIQLKWRTCNHFIRPVTMQIKTKGQKVLTCIFTKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYLPFYSTTRRVWLDVPPREVGSVGNAGRKGYETLVL 1147 HN Q +LTP L*++ D +HYCC HVQG G QLQ L PEFQ D+ M+A T IKGTKFSD*P PELGNDCLGPQ V+L VPSL* PPCGN +LSPEYGKFDFL+KC T PMPKP+VNGV+VLAQ AGC KGISLH QF M CC +VEP+LI +P Q* +N+KC T +L + E+GI+R+ *I LL+KAN ++LNIQ K R NH + +T+ I+ K +VL + TK A LYEV LPWN D+L+ V + HVKTRNV RQILIKY+Y P + T RV LDVP + +V + K ++ LVL Subject 6707 HNFQSVLTPRWLL*NSLDGYHYCCLHVQGFGWQLQLLL*PEFQKDNACMKATRVTTSIKGTKFSD*PNIPELGNDCLGPQ*VILFVPSL*CPPCGNW*ILSPEYGKFDFLKKCRTNPMPKPMVNGVMVLAQLAGCWKGISLHYYQFASMPCCCDVEPMLIF*SWVPRLQ*RHNVKC*TPHLAGQLEVGIVRNC*IYGLLSKANKNSLNIQFKRRPHNHCVHSITINIEAKRLEVLAGVSTKPASFSLYEVCLPWNVDVLVGV*EQHVKTRNVRDRQILIKYIYPPLHCTPWRVGLDVPSC*IWTVWHTRCKSHKRLVL 7660
Range 6: 7706 to 7852 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
57.0 bits(118) | 0.0 | 26/49(53%) | 0/49(0%) | Plus/Minus |
Query 2 PLPAPKISVWPQKLHLTHLATFLVGSPYDNVNNDNQFLHQYG*PLKPSN 148 PL K VW LHLT ATF SP+++ NN NQF +G*PLKPS+ Subject 7706 PLLTLKP*VWLHMLHLTRQATFQFDSPFNSFNNCNQFHQLFG*PLKPSD 7852
Range 7: 7516 to 7851 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
198.6 bits(427) | 0.0 | 87/112(78%) | 0/112(0%) | Minus/Plus |
Query 3 YMYYLFGILVLVGAAIATLILAHVDSNNGDNHGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HCHMASPPGRLPGESNEAFEARLKSLELAR 338 YM+YLFGILV+VG AIA ILAHVDS++G++ GC IRATGESILIENCGPSEALA+TVKEVLGGLKALGVS +EIDY C* MAS G+LPGESNEA+EARLK+LELAR Subject 7516 YMHYLFGILVIVGVAIAIQILAHVDSSSGNHQGCFIRATGESILIENCGPSEALAATVKEVLGGLKALGVSQKVDEIDYSC*KS*MASQIGKLPGESNEAYEARLKALELAR 7851
Range 8: 7021 to 7458 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
146.3 bits(313) | 0.0 | 74/146(51%) | 0/146(0%) | Minus/Plus |
Query 396 AI*VGC*GCANLLWQGGS*FSGCA*FRFQTSL*GTRCYI*CCYLIEIKGSDLR**ALVLHCCNKT*EEIDHHAVKCLFSNLRIGPKLSPR*RLAWALAWCCIS*ESQICHTQGTTYINFHMEGVIGTAPKA*HIVVPNSHSQALGF 833 A * GC*G + LLW+GG S CA FR Q +L G I* C +IE+ G + R *ALVL NK ++ D++AV+CL SNL G + * LAWAL W S*ES+ICH Q T + +FH EG+ GTA + * IVV SHSQ G+ Subject 7021 AF*TGC*GSSYLLWKGGRRSSSCAQFRLQVALRGAGFNI*RCDVIEV*GPNFRR*ALVLRRSNKASKQTDNNAVRCLSSNLPTGLRP*LH*PLAWALDWFYTS*ESRICHIQVTIFTSFHTEGITGTAQRV*PIVVLGSHSQVQGY 7458
Range 9: 6709 to 6975 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
103.7 bits(220) | 0.0 | 45/89(51%) | 0/89(0%) | Minus/Plus |
Query 879 GREFHSLYGRRSRHSQPLWEVHQAILSWLCCKREDKHT**VSVCK*HFWF*RVIF*PISKYQCSKGGSLHKVKDLQIW*KYM*VPSVLW 1145 GR F Y +R S+ +VHQA+LS +C REDK+T**V VC *HFWF*R + P+ ++Q SKGG+LHK +LQ+W ++ VP + W Subject 6709 GRVFCGFYSGCARQSKSNRKVHQALLSRVCSAREDKYT**VFVCL*HFWF*RAVLRPLPEHQHSKGGTLHKD*NLQVWC*HLQVPPIFW 6975
Range 10: 7119 to 7853 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
326.4 bits(706) | 0.0 | 170/245(69%) | 0/245(0%) | Minus/Plus |
Query 1 RYEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIGRN*SSCSEMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPKQSFPSSGLFGQSENFVPLIIVIVLTASIYVLSVWNSGSXXXXXXXXXXXXXRQQ*W**SWLSHKGYRGVNIN*ELWPK*GACFNS*GSAGRFEGFRG*PYW*RN*LSLLTLSYGEPTRKVAR*VK*SF*GQTEIFGAGKG 735 R V HL L Y*+ G + IS GST QQ I N* CSEMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGG YRDGTKSITYCGP+QSFPSSG+FGQSENFVPLI+V+ L A I+ LS WNSG R CNC+PNPCTCRQQ*W* S L HK +RGVN +*+LW K G S* G EGFRG*P * N*L LL GE KVA VK*S * QT F KG Subject 7119 RCGVQHLTL*RY*SLGTQLQKISIGSTSQQQGIEAN***CSEMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGHYRDGTKSITYCGPRQSFPSSGIFGQSENFVPLILVVTLVAFIHALSFWNSGHSRSCNCHPNPCTCRQQ*W*PSRLFHKSHRGVNTD*KLWAKRGPSCYS*RGVGWSEGFRG*PKS**N*LQLLKELNGESNWKVAWRVK*SI*SQT*GFRVSKG 7853
Range 11: 6768 to 7058 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.9 bits(168) | 0.0 | 51/97(53%) | 0/97(0%) | Minus/Plus |
Query 796 GTSSHTLLVVL*KGR*TYLMSICL*VTFLVLTCYFLTHIKISVFQGRLTS*SQRPADLVKIHVSTFCPLVLICIVTGLMK*LQVRHLSWMLRVC*FA 1086 GTSS TL V KG * YLMSICL +TFLVLTC T + S FQGR TS* + A LV ST L I IV + L R L+WMLR FA Subject 6768 GTSSPTLQGVQCKGG*IYLMSICLSLTFLVLTCCSQTPTRTSTFQGRHTS*RLKLAGLVLTPASTSNLLASIFIVIEWTQWLWGRLLNWMLREFLFA 7058
Range 12: 6747 to 7271 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
142.7 bits(305) | 0.0 | 80/175(46%) | 0/175(0%) | Plus/Minus |
Query 583 PIRRLLKRHFTA**SISSYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLVPHKEV*NRNYAQPLNQLPPCQSKLAHPQHPTQMANL*SLHQTCHYAN*NQRTEGTYMYFHQICRSLTL*SEPPLEH*YFDMGQKITRQNQKCHLQTDTHQVCLSSLLQHNQESMA*CTSQRGWEC 1107 P+ RLL+RH TA S+ LL + RT+AY + P SI Q M + P + *+RN AQ L+ PP QSK PQHP Q A L HY +Q+ GT HQ C+ +L*S PPLE * G + RQNQKC QT+THQV LSSL H ES A*CT +C Subject 6747 PVGRLLERHLTALLSVCFDALLLRRRTNAYLLKLGP*TSITSQR*MLNPAPRRAT*SRNCAQLLDLRPPFQSK*ELPQHPVQKATPQPLRPLYHYKYRSQKIGGTCRC*HQTCKF*SL*SVPPLEC*CSGRGLRTARQNQKCQRQTNTHQVYLSSLALHTLESRA*CTFLLDLDC 7271
Range 13: 7516 to 7851 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
130.7 bits(279) | 0.0 | 59/112(53%) | 0/112(0%) | Plus/Minus |
Query 3 PCQLQRFQSGLKSFI*LTWQPSWWARHMTMLTMIINFFTNMANP*SLQTSQHFLNC*SKRLTWATILN*Y*LPCSPYETTMIITIIAVDMCKD*GCNCSAYKNQNSKQIVHI 338 PC L +SG FI*L Q S RH+T+ T +INF +ANP*SLQT+QH NC S L W TI N Y*LP YET +++T AV MCKD NC++Y +QNSK+I+H+ Subject 7516 PC*L*SLKSGFICFI*LARQLSNLTRHLTLSTTVINFINFLANP*SLQTTQHLFNCSS*GLAWPTIFNQY*LPGGSYETALMVTTTAVYMCKDLDGNCNSYYDQNSKKIMHV 7851
Range 14: 7323 to 7481 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
66.1 bits(138) | 0.0 | 30/53(57%) | 0/53(0%) | Plus/Minus |
Query 373 HKILRLTKKPRAWE*LFGTTICYAFGAVPITPSMWKLMYVVP*VWQI*LS*EM 531 H+I LTK P WE*L TTI Y AVP+ PS+WKL+ +V *+WQI LS E+ Subject 7323 HEIF*LTKYP*TWE*LPRTTIGYTLCAVPVMPSVWKLVNIVT*IWQIRLSQEV 7481
Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OB1
Sequence ID: AB277783.1 Length: 2876 Number of Matches: 10
Range 1: 964 to 2103 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
898.7 bits(1955) | 0.0 | 377/380(99%) | 0/380(0%) | Plus/Minus |
Query 6 CQLQRFQSGLKSFI*LTWQPSWWARHMTMLTMIINFFTNMANP*SLQTSQHFLNC*SKRLTWATILN*Y*LPCSPYETTMIITIIAVDMCKD*GCNCSAYKNQNSKQIVHIWRPLILLQLLKAQNSQTDQKAQSLGMTVWDHNMLCFWCRPYNALHVEIDVCCPLSMANLTFLGNAAPSQCPSQSSTG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLIF*YGSENNTSKPEMSLTDRYSSSMFIFPFTAQPGEYGLMYLPERLGVSGTPAVKAMKLSS 1145 CQLQRFQSGLKSFI*LTWQPSWWARHMTMLTMIINFFTNMANP*SLQTSQHFLNC*SKRLTWATILN*Y*LPCSPYETTMIITIIAVDMCKD*GCNCSAYKNQNSKQIVHIWRPLILLQLLKAQNSQTDQKAQSLGMTVWDHNMLCFWCRPYNALHVEIDVCCPLSMANLTFLGN A SQCPSQSS G**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLIF*YGSENNTSKPEMSLTDRYSSSMFIFPFTAQPGEYGLMYLPERLGVSGTPAVKAMKLSS Subject 964 CQLQRFQSGLKSFI*LTWQPSWWARHMTMLTMIINFFTNMANP*SLQTSQHFLNC*SKRLTWATILN*Y*LPCSPYETTMIITIIAVDMCKD*GCNCSAYKNQNSKQIVHIWRPLILLQLLKAQNSQTDQKAQSLGMTVWDHNMLCFWCRPYNALHVEIDVCCPLSMANLTFLGNEALSQCPSQSSMG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLIF*YGSENNTSKPEMSLTDRYSSSMFIFPFTAQPGEYGLMYLPERLGVSGTPAVKAMKLSS 2103
Range 2: 962 to 2104 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
879.5 bits(1913) | 0.0 | 378/381(99%) | 0/381(0%) | Minus/Plus |
Query 5 EDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPVDDWLGHWLGAAFPKKVKFAILRGQHTSISTWRAL*GRHQKHNILWSQTVIPKLWAFWSV*EFCAFNNCNSINGLHICTICLEFWFL*ALQLQP*SLHMSTAIMVIIMVVS*GLQGSQY*LRIVAQVRRLLQQLRKCWEV*RL*GLAXXXXXXXXXXXXXIWRAHQEGCQVSQMKLLRPD*NLWSWQ 1147 EDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHP+DDWLGHWL A+FPKKVKFAILRGQHTSISTWRAL*GRHQKHNILWSQTVIPKLWAFWSV*EFCAFNNCNSINGLHICTICLEFWFL*ALQLQP*SLHMSTAIMVIIMVVS*GLQGSQY*LRIVAQVRRLLQQLRKCWEV*RL*GLAILVKKLIIIVNIVIWRAHQEGCQVSQMKLLRPD*NLWSWQ Subject 962 EDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPIDDWLGHWLSASFPKKVKFAILRGQHTSISTWRAL*GRHQKHNILWSQTVIPKLWAFWSV*EFCAFNNCNSINGLHICTICLEFWFL*ALQLQP*SLHMSTAIMVIIMVVS*GLQGSQY*LRIVAQVRRLLQQLRKCWEV*RL*GLAILVKKLIIIVNIVIWRAHQEGCQVSQMKLLRPD*NLWSWQ 2104
Range 3: 964 to 1713 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
563.3 bits(1223) | 0.0 | 241/250(96%) | 0/250(0%) | Minus/Plus |
Query 396 GREFHSLYGRRSRHSQPLWEVHQAILSWLCCKREDKHT**VSVCK*HFWF*RVIF*PISKYQCSKGGSLHKVKDLQIW*KYM*VPSVLWF*FA**QV**SDYRFAI*VGC*GCANLLWQGGS*FSGCA*FRFQTSL*GTRCYI*CCYLIEIKGSDLR**ALVLHCCNKT*EEIDHHAVKCLFSNLRIGPKLSPR*RLAWALAWCCIS*ESQICHTQGTTYINFHMEGVIGTAPKA*HIVVPNSHSQALGF 1145 GREFHSLYGRRSRHSQPLWEVH AILSWLCCK EDKHT**VSVCK*HFWF*RVIF*PISKYQCSKGGSLHKVKDLQIW KYM*VPSVLWF*FA**QV**SDYR AI*VGC*GCA+LLWQGGS*FSGCA*FRFQTSL*GTRCYI*CCYLIEIKGSDLR**ALVLHCCNKT*+EIDHHAVKCLFSNLRIGPKLSP *RLAWALA C IS*ESQICHTQGTTYINFHMEGVIGTAPKA*HIVVPNSHSQALGF Subject 964 GREFHSLYGRRSRHSQPLWEVH*AILSWLCCKGEDKHT**VSVCK*HFWF*RVIF*PISKYQCSKGGSLHKVKDLQIWRKYM*VPSVLWF*FA**QV**SDYRLAI*VGC*GCADLLWQGGS*FSGCA*FRFQTSL*GTRCYI*CCYLIEIKGSDLR**ALVLHCCNKT*KEIDHHAVKCLFSNLRIGPKLSPH*RLAWALA*CFIS*ESQICHTQGTTYINFHMEGVIGTAPKA*HIVVPNSHSQALGF 1713
Range 4: 1750 to 2106 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
281.0 bits(607) | 0.0 | 118/119(99%) | 0/119(0%) | Minus/Plus |
Query 3 **Y*RPPYMYYLFGILVLVGAAIATLILAHVDSNNGDNHGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HCHMASPPGRLPGESNEAFEARLKSLELAR 359 **Y*RPPYMYYLFGILVLVGAAIATLILAHVDSNNGDNHGCLIRATGESILIENCGPSEALAST+KEVLGGLKALGVSHIGEEIDYHC*HCHMASPPGRLPGESNEAFEARLKSLELAR Subject 1750 **Y*RPPYMYYLFGILVLVGAAIATLILAHVDSNNGDNHGCLIRATGESILIENCGPSEALASTIKEVLGGLKALGVSHIGEEIDYHC*HCHMASPPGRLPGESNEAFEARLKSLELAR 2106
Range 5: 962 to 1918 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
718.6 bits(1562) | 0.0 | 312/319(98%) | 0/319(0%) | Plus/Minus |
Query 191 GHNSQLILTPL*PL*DNHDYHHYCCRHVXXXXXXXXXXXEPEFQTDSTYMEAVNTITIIKGTKFSD*PKSPELGNDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMPKPIVNGVIVLAQFAGC*KGISLHDDQFLPMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSYLTRKFEIGIMRSR*INCLLAKAN*HTLNIQLKWRTCNHFIRPVTMQIKTKGQKVLTCIFTKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYLPFYSTTRRVWLDVPPREVGSVGNAGRKGYETLVL 1147 GHNSQLILTPL*PL*DNHDYHHYCCRHVQGLGLQLQRLQEPEFQTDSTYMEAVNTITIIKGTKFSD*PKSPELGNDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRK STKPMPKPIVNGVIVLAQFAGC*KGISLHDDQFL MSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSYLTRKFEIGIMRSR*INCLLAKAN HTLNIQLKWR CNHFIRPVTMQIKTKGQKVLTCIF KSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYLP YSTTRRVWL+VPPREVGSVGNAGRKGYETLVL Subject 962 GHNSQLILTPL*PL*DNHDYHHYCCRHVQGLGLQLQRLQEPEFQTDSTYMEAVNTITIIKGTKFSD*PKSPELGNDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRK*STKPMPKPIVNGVIVLAQFAGC*KGISLHDDQFLSMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSYLTRKFEIGIMRSR*INCLLAKANQHTLNIQLKWRACNHFIRPVTMQIKTKGQKVLTCIFAKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYLPLYSTTRRVWLNVPPREVGSVGNAGRKGYETLVL 1918
Range 6: 1961 to 2104 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.0 bits(262) | 0.0 | 48/48(100%) | 0/48(0%) | Plus/Minus |
Query 5 LPAPKISVWPQKLHLTHLATFLVGSPYDNVNNDNQFLHQYG*PLKPSN 148 LPAPKISVWPQKLHLTHLATFLVGSPYDNVNNDNQFLHQYG*PLKPSN Subject 1961 LPAPKISVWPQKLHLTHLATFLVGSPYDNVNNDNQFLHQYG*PLKPSN 2104
Range 7: 1359 to 2105 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
539.9 bits(1172) | 0.0 | 246/249(99%) | 0/249(0%) | Minus/Plus |
Query 4 SNFLVRYEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIGRN*SSCSEMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPKQSFPSSGLFGQSENFVPLIIVIVLTASIYVLSVWNSGSXXXXXXXXXXXXXRQQ*W**SWLSHKGYRGVNIN*ELWPK*GACFNS*GSAGRFEGFRG*PYW*RN*LSLLTLSYGEPTRKVAR*VK*SF*GQTEIFGAGK 750 SNFLVRYEVLHLMLLPY*NQGIRPPMISTGSTLLQQDI RN*SSCSEMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPKQSFPSSGLFGQSENFVPLIIVIVLTASIYVLSVWNSGSCRRCNCNPNPCTCRQQ*W**SWLSHKGYRGVNIN*ELWPK*GACFN+*GS GRFEGFRG*PYW*RN*LSLLTLSYGEPTRKVAR*VK*SF*GQTEIFGAGK Subject 1359 SNFLVRYEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIERN*SSCSEMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPKQSFPSSGLFGQSENFVPLIIVIVLTASIYVLSVWNSGSCRRCNCNPNPCTCRQQ*W**SWLSHKGYRGVNIN*ELWPK*GACFNN*GSVGRFEGFRG*PYW*RN*LSLLTLSYGEPTRKVAR*VK*SF*GQTEIFGAGK 2105
Range 8: 963 to 1313 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
257.7 bits(556) | 0.0 | 113/117(97%) | 0/117(0%) | Minus/Plus |
Query 796 RTRVS*PLRPAFPTLPTSLGGTSSHTLLVVL*KGR*TYLMSICL*VTFLVLTCYFLTHIKISVFQGRLTS*SQRPADLVKIHVSTFCPLVLICIVTGLMK*LQVRHLSWMLRVC*FA 1146 RTRVS*PLRPAFPTLPTSLGGT SHTLLVVL*+GR*TYLMSICL*VTFLVLTCYFLTHIKISVFQGRLTS*SQRPADL KIHVSTFCPLVLICIVTGLMK*LQ RHLSWMLRVC*FA Subject 963 RTRVS*PLRPAFPTLPTSLGGTLSHTLLVVL*RGR*TYLMSICL*VTFLVLTCYFLTHIKISVFQGRLTS*SQRPADLAKIHVSTFCPLVLICIVTGLMK*LQARHLSWMLRVC*FA 1313
Range 9: 1002 to 1736 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
544.0 bits(1181) | 0.0 | 237/245(97%) | 0/245(0%) | Plus/Minus |
Query 373 HKILRLTKKPRAWE*LFGTTICYAFGAVPITPSMWKLMYVVP*VWQI*LS*EMQHXXXXXXXXXXGDSFGPIRRLLKRHFTA**SISSYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLVPHKEV*NRNYAQPLNQLPPCQSKLAHPQHPTQMANL*SLHQTCHYAN*NQRTEGTYMYFHQICRSLTL*SEPPLEH*YFDMGQKITRQNQKCHLQTDTHQVCLSSLLQHNQESMA*CTSQRGWEC 1107 HKILRLTKKPRAWE*LFGTTICYAFGAVPITPSMWKLMYVVP*VWQI*LS*EM+H ANAQANRQ GDSFGPIRRLLKRHFTA**SIS YVLLQQCRTSAYHRRSDPLISIR*QHQM*HLVPHKEV*NRNYAQPLNQLPPCQSK AHPQHPTQMA+L*SLHQTCHYAN*NQRTEGTYMYF QICRSLTL*SEPPLEH*YFDMGQKITRQNQKCHLQTDTHQVCLSS LQHNQESMA*CTSQRGWEC Subject 1002 HKILRLTKKPRAWE*LFGTTICYAFGAVPITPSMWKLMYVVP*VWQI*LS*EMKH*ANAQANRQWGDSFGPIRRLLKRHFTA**SISFYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLVPHKEV*NRNYAQPLNQLPPCQSKSAHPQHPTQMASL*SLHQTCHYAN*NQRTEGTYMYFRQICRSLTL*SEPPLEH*YFDMGQKITRQNQKCHLQTDTHQVCLSSPLQHNQESMA*CTSQRGWEC 1736
Range 10: 1788 to 2108 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
233.8 bits(504) | 0.0 | 105/107(98%) | 0/107(0%) | Plus/Minus |
Query 1 ALASSKDFSLASKASFDSPGNLPGGLAI*QC*Q**SISSPIWLTPKAFKPPSTSLTVEASASLGPQFSINIDSPVALMRQP*LSPLLLSTCARIRVAIAAPTRTRIP 321 ALASSKDFSLASKASFDSPGNLPGGLAI*QC*Q**SISSPIWLTPKAFKPP+TSL VEASASLGPQFSINIDSPVALMRQP*LSPLLLSTCARIRVAIAAPTRTRIP Subject 1788 ALASSKDFSLASKASFDSPGNLPGGLAI*QC*Q**SISSPIWLTPKAFKPPNTSLIVEASASLGPQFSINIDSPVALMRQP*LSPLLLSTCARIRVAIAAPTRTRIP 2108
Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome
Sequence ID: KX274275.1 Length: 8724 Number of Matches: 10
Range 1: 6708 to 7847 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
892.7 bits(1942) | 0.0 | 373/380(98%) | 0/380(0%) | Plus/Minus |
Query 6 CQLQRFQSGLKSFI*LTWQPSWWARHMTMLTMIINFFTNMANP*SLQTSQHFLNC*SKRLTWATILN*Y*LPCSPYETTMIITIIAVDMCKD*GCNCSAYKNQNSKQIVHIWRPLILLQLLKAQNSQTDQKAQSLGMTVWDHNMLCFWCRPYNALHVEIDVCCPLSMANLTFLGNAAPSQCPSQSSTG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLIF*YGSENNTSKPEMSLTDRYSSSMFIFPFTAQPGEYGLMYLPERLGVSGTPAVKAMKLSS 1145 CQLQRFQSGLKSFI*LTWQPSWWARHMTMLTMIINFFTNMANP*SLQTSQHFLNC*SKRLTWATILN*Y*LPCSPYETTMIITIIAVDMCKD*GCNCSAYKNQNSKQIVHIW PLILLQLLKAQNSQTDQ+AQSLGMTVWDHNMLCFWC PYNALHVEIDVCCPL+MANLTFL NAAPSQCP QSSTG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLIF*YGSENNTSKPEMSLTDRYSSSMFIFPFTAQPGEYGLMYLPERLGVSGTPAVKAMK SS Subject 6708 CQLQRFQSGLKSFI*LTWQPSWWARHMTMLTMIINFFTNMANP*SLQTSQHFLNC*SKRLTWATILN*Y*LPCSPYETTMIITIIAVDMCKD*GCNCSAYKNQNSKQIVHIWMPLILLQLLKAQNSQTDQRAQSLGMTVWDHNMLCFWCHPYNALHVEIDVCCPLNMANLTFLENAAPSQCPRQSSTG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLIF*YGSENNTSKPEMSLTDRYSSSMFIFPFTAQPGEYGLMYLPERLGVSGTPAVKAMKFSS 7847
Range 2: 6706 to 7848 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
867.1 bits(1886) | 0.0 | 374/381(98%) | 0/381(0%) | Minus/Plus |
Query 5 EDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPVDDWLGHWLGAAFPKKVKFAILRGQHTSISTWRAL*GRHQKHNILWSQTVIPKLWAFWSV*EFCAFNNCNSINGLHICTICLEFWFL*ALQLQP*SLHMSTAIMVIIMVVS*GLQGSQY*LRIVAQVRRLLQQLRKCWEV*RL*GLAXXXXXXXXXXXXXIWRAHQEGCQVSQMKLLRPD*NLWSWQ 1147 EDE+FIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPVDDW GHWLGAAF KKVKFAI RGQHTSISTWRAL*G HQKHNILWSQTVIPKLWA WSV*EFCAFNNCNSING+HICTICLEFWFL*ALQLQP*SLHMSTAIMVIIMVVS*GLQGSQY*LRIVAQVRRLLQQLRKCWEV*RL*GLAILVKKLIIIVNIVIWRAHQEGCQVSQMKLLRPD*NLWSWQ Subject 6706 EDENFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPVDDWRGHWLGAAFSKKVKFAIFRGQHTSISTWRAL*GWHQKHNILWSQTVIPKLWALWSV*EFCAFNNCNSINGIHICTICLEFWFL*ALQLQP*SLHMSTAIMVIIMVVS*GLQGSQY*LRIVAQVRRLLQQLRKCWEV*RL*GLAILVKKLIIIVNIVIWRAHQEGCQVSQMKLLRPD*NLWSWQ 7848
Range 3: 6708 to 7454 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
567.0 bits(1231) | 0.0 | 240/249(96%) | 0/249(0%) | Minus/Plus |
Query 399 GREFHSLYGRRSRHSQPLWEVHQAILSWLCCKREDKHT**VSVCK*HFWF*RVIF*PISKYQCSKGGSLHKVKDLQIW*KYM*VPSVLWF*FA**QV**SDYRFAI*VGC*GCANLLWQGGS*FSGCA*FRFQTSL*GTRCYI*CCYLIEIKGSDLR**ALVLHCCNKT*EEIDHHAVKCLFSNLRIGPKLSPR*RLAWALAWCCIS*ESQICHTQGTTYINFHMEGVIGTAPKA*HIVVPNSHSQALG 1145 GREFHSLYGRRS H+QPLWEVHQAILSWLCCKREDKHT**VSVCK*HFWF*RVIF*PISKYQCSKGGSLHKVKDLQIW KYM*VPSVLWF*FA**QV**SDYRFAI*VGC*GCANLLWQGGS*FSGCA*F FQTSL*G RCYI*CCYLIEIKGSDLR**ALVLHCCNKT*+EIDHHAVKCLFSNLRIGPKLSPR*RLAWALAWCCI *ESQICH QGTTYINFHMEGVIG APKA*HIVVPNSHSQALG Subject 6708 GREFHSLYGRRS*HTQPLWEVHQAILSWLCCKREDKHT**VSVCK*HFWF*RVIF*PISKYQCSKGGSLHKVKDLQIWRKYM*VPSVLWF*FA**QV**SDYRFAI*VGC*GCANLLWQGGS*FSGCA*F*FQTSL*GARCYI*CCYLIEIKGSDLR**ALVLHCCNKT*KEIDHHAVKCLFSNLRIGPKLSPR*RLAWALAWCCIF*ESQICHIQGTTYINFHMEGVIGMAPKA*HIVVPNSHSQALG 7454
Range 4: 7494 to 7850 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
277.4 bits(599) | 0.0 | 118/119(99%) | 0/119(0%) | Minus/Plus |
Query 3 **Y*RPPYMYYLFGILVLVGAAIATLILAHVDSNNGDNHGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HCHMASPPGRLPGESNEAFEARLKSLELAR 359 **Y*R PYMYYLFGILVLVGAAIATLILAHVDSNNGDNHGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HCHMASPPGRLPGESNEAFEARLKSLELAR Subject 7494 **Y*RHPYMYYLFGILVLVGAAIATLILAHVDSNNGDNHGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HCHMASPPGRLPGESNEAFEARLKSLELAR 7850
Range 5: 6706 to 7662 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
715.4 bits(1555) | 0.0 | 310/319(97%) | 0/319(0%) | Plus/Minus |
Query 191 GHNSQLILTPL*PL*DNHDYHHYCCRHVXXXXXXXXXXXEPEFQTDSTYMEAVNTITIIKGTKFSD*PKSPELGNDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMPKPIVNGVIVLAQFAGC*KGISLHDDQFLPMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSYLTRKFEIGIMRSR*INCLLAKAN*HTLNIQLKWRTCNHFIRPVTMQIKTKGQKVLTCIFTKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYLPFYSTTRRVWLDVPPREVGSVGNAGRKGYETLVL 1147 GHNSQLILTPL*PL*DNHDYHHYCCRHVQGLGLQLQRLQEPEFQTDSTYM+AVNTITIIKGTKFSD*PKSPELGNDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMP PIVNGVIVLAQFAGC*KGISLHDDQFL MSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTS+LTRKFEI IMRSR*INCLLAKAN*HTLNIQLKWRTCNHFIRPVTMQIKTKGQKVLTCIF KSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYLPFYSTTRRVWLDVPPREVG V NAGRKGYE LVL Subject 6706 GHNSQLILTPL*PL*DNHDYHHYCCRHVQGLGLQLQRLQEPEFQTDSTYMDAVNTITIIKGTKFSD*PKSPELGNDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMPTPIVNGVIVLAQFAGC*KGISLHDDQFLSMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSHLTRKFEIRIMRSR*INCLLAKAN*HTLNIQLKWRTCNHFIRPVTMQIKTKGQKVLTCIFAKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYLPFYSTTRRVWLDVPPREVGCVRNAGRKGYEILVL 7662
Range 6: 7705 to 7848 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.0 bits(262) | 0.0 | 48/48(100%) | 0/48(0%) | Plus/Minus |
Query 5 LPAPKISVWPQKLHLTHLATFLVGSPYDNVNNDNQFLHQYG*PLKPSN 148 LPAPKISVWPQKLHLTHLATFLVGSPYDNVNNDNQFLHQYG*PLKPSN Subject 7705 LPAPKISVWPQKLHLTHLATFLVGSPYDNVNNDNQFLHQYG*PLKPSN 7848
Range 7: 7103 to 7849 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
537.6 bits(1167) | 0.0 | 246/249(99%) | 0/249(0%) | Minus/Plus |
Query 4 SNFLVRYEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIGRN*SSCSEMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPKQSFPSSGLFGQSENFVPLIIVIVLTASIYVLSVWNSGSXXXXXXXXXXXXXRQQ*W**SWLSHKGYRGVNIN*ELWPK*GACFNS*GSAGRFEGFRG*PYW*RN*LSLLTLSYGEPTRKVAR*VK*SF*GQTEIFGAGK 750 SNFLVR EVLHLMLLPY*NQGIRPPMISTGSTLLQQDI RN*SSCSEMPFQQPANWAKTITPLTIG+GIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPKQSFPSSGLFGQSENFVPLIIVIVLTASIYVLSVWNSGSCRRCNCNPNPCTCRQQ*W**SWLSHKGYRGVNIN*ELWPK*GACFNS*GSAGRFEGFRG*PYW*RN*LSLLTLSYGEPTRKVAR*VK*SF*GQTEIFGAGK Subject 7103 SNFLVRCEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIERN*SSCSEMPFQQPANWAKTITPLTIGVGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPKQSFPSSGLFGQSENFVPLIIVIVLTASIYVLSVWNSGSCRRCNCNPNPCTCRQQ*W**SWLSHKGYRGVNIN*ELWPK*GACFNS*GSAGRFEGFRG*PYW*RN*LSLLTLSYGEPTRKVAR*VK*SF*GQTEIFGAGK 7849
Range 8: 6707 to 7057 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
255.4 bits(551) | 0.0 | 113/117(97%) | 0/117(0%) | Minus/Plus |
Query 796 RTRVS*PLRPAFPTLPTSLGGTSSHTLLVVL*KGR*TYLMSICL*VTFLVLTCYFLTHIKISVFQGRLTS*SQRPADLVKIHVSTFCPLVLICIVTGLMK*LQVRHLSWMLRVC*FA 1146 RTR+S*PLRPAF T PTSLGGTSSHTLLVVL*KGR*TYLMSICL*VTFLVLTCYFLTHIKISVFQGRLTS*SQRPADL KIHVSTFCPLVLICIVTGLMK*LQVRHLSWMLRVC*FA Subject 6707 RTRIS*PLRPAFLTHPTSLGGTSSHTLLVVL*KGR*TYLMSICL*VTFLVLTCYFLTHIKISVFQGRLTS*SQRPADLAKIHVSTFCPLVLICIVTGLMK*LQVRHLSWMLRVC*FA 7057
Range 9: 6746 to 7480 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
544.0 bits(1181) | 0.0 | 235/245(96%) | 0/245(0%) | Plus/Minus |
Query 373 HKILRLTKKPRAWE*LFGTTICYAFGAVPITPSMWKLMYVVP*VWQI*LS*EMQHXXXXXXXXXXGDSFGPIRRLLKRHFTA**SISSYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLVPHKEV*NRNYAQPLNQLPPCQSKLAHPQHPTQMANL*SLHQTCHYAN*NQRTEGTYMYFHQICRSLTL*SEPPLEH*YFDMGQKITRQNQKCHLQTDTHQVCLSSLLQHNQESMA*CTSQRGWEC 1107 HKILRLTK+PRAWE*LFGTTICYAFGA+PITPSMWKLMYVVP*+WQI*LS*+MQHQANA ANRQRGDSFGPIRRLLKRHFTA**SIS YVLLQQCRTSAYHRRSDPLISIR*QHQM*HL PHKEV*N+NYAQPLNQLPPCQSKLAHPQHPTQMANL*SLHQTCHYAN*NQRTEGTYMYF QICRSLTL*SEPPLEH*YFDMGQKITRQNQKCHLQTDTHQVCLSSLLQHNQESMA*CTSQRGW C Subject 6746 HKILRLTKEPRAWE*LFGTTICYAFGAIPITPSMWKLMYVVP*IWQI*LS*KMQHQANAHANRQRGDSFGPIRRLLKRHFTA**SISFYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLAPHKEV*NQNYAQPLNQLPPCQSKLAHPQHPTQMANL*SLHQTCHYAN*NQRTEGTYMYFRQICRSLTL*SEPPLEH*YFDMGQKITRQNQKCHLQTDTHQVCLSSLLQHNQESMA*CTSQRGWVC 7480
Range 10: 7532 to 7852 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
238.0 bits(513) | 0.0 | 107/107(100%) | 0/107(0%) | Plus/Minus |
Query 1 ALASSKDFSLASKASFDSPGNLPGGLAI*QC*Q**SISSPIWLTPKAFKPPSTSLTVEASASLGPQFSINIDSPVALMRQP*LSPLLLSTCARIRVAIAAPTRTRIP 321 ALASSKDFSLASKASFDSPGNLPGGLAI*QC*Q**SISSPIWLTPKAFKPPSTSLTVEASASLGPQFSINIDSPVALMRQP*LSPLLLSTCARIRVAIAAPTRTRIP Subject 7532 ALASSKDFSLASKASFDSPGNLPGGLAI*QC*Q**SISSPIWLTPKAFKPPSTSLTVEASASLGPQFSINIDSPVALMRQP*LSPLLLSTCARIRVAIAAPTRTRIP 7852
Rupestris stem pitting associated virus strain Syrah, complete genome
Sequence ID: AY368590.1 Length: 8742 Number of Matches: 9
Range 1: 6708 to 7847 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
832.7 bits(1811) | 0.0 | 352/380(93%) | 0/380(0%) | Plus/Minus |
Query 6 CQLQRFQSGLKSFI*LTWQPSWWARHMTMLTMIINFFTNMANP*SLQTSQHFLNC*SKRLTWATILN*Y*LPCSPYETTMIITIIAVDMCKD*GCNCSAYKNQNSKQIVHIWRPLILLQLLKAQNSQTDQKAQSLGMTVWDHNMLCFWCRPYNALHVEIDVCCPLSMANLTFLGNAAPSQCPSQSSTG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLIF*YGSENNTSKPEMSLTDRYSSSMFIFPFTAQPGEYGLMYLPERLGVSGTPAVKAMKLSS 1145 CQLQRFQSG KSFI*LTWQPSWWA H+TMLTMIINFFTNMANP*SLQTS HFLNC*SK LTWATI N*Y*LPCSPYETT+ ITIIAVDMCKD*GCN SAYKNQNSKQIVHIWRPLIL QLLK QNSQTDQKAQSLG TVWDHNMLCFWCRPYN LHVEIDVCCPLS ANLTFLGNAAPSQCPS SS * FWPNSQVAEKA HCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNV PRTSQGSLKSELCAAAK TASLPKQISTPSTSNSNGEPVITSSDLSLC KPKDRRYLHVF PNLQVFDFMK*ASLGTLIF*YGSENNTSK E S TDRYSSSMFIFPFTAQPGEYGLMYLPER GVSGTPAVKAMKLSS Subject 6708 CQLQRFQSGFKSFI*LTWQPSWWACHLTMLTMIINFFTNMANP*SLQTS*HFLNC*SKCLTWATIFN*Y*LPCSPYETTLTITIIAVDMCKD*GCNYSAYKNQNSKQIVHIWRPLILSQLLKVQNSQTDQKAQSLGKTVWDHNMLCFWCRPYNVLHVEIDVCCPLSTANLTFLGNAAPSQCPSLSSME*QFWPNSQVAEKASHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVVPRTSQGSLKSELCAAAKLTASLPKQISTPSTSNSNGEPVITSSDLSLCTSKPKDRRYLHVFLPNLQVFDFMK*ASLGTLIF*YGSENNTSKSEKSFTDRYSSSMFIFPFTAQPGEYGLMYLPERFGVSGTPAVKAMKLSS 7847
Range 2: 6706 to 7848 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
819.0 bits(1781) | 0.0 | 353/381(93%) | 0/381(0%) | Minus/Plus |
Query 5 EDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPVDDWLGHWLGAAFPKKVKFAILRGQHTSISTWRAL*GRHQKHNILWSQTVIPKLWAFWSV*EFCAFNNCNSINGLHICTICLEFWFL*ALQLQP*SLHMSTAIMVIIMVVS*GLQGSQY*LRIVAQVRRLLQQLRKCWEV*RL*GLAXXXXXXXXXXXXXIWRAHQEGCQVSQMKLLRPD*NLWSWQ 1147 EDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSV+D S FDVLFSDPYQNISVPREAHFIKSKTCRFG+NTCKYLLSFGF++HSDRSDEVITGSPFELDVEGVLICFGKEAV+LAAAHNSDFKLPCEVRG TFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*+AFSATCELGQN + +DD LGHWLGAAFPKKVKFA+LRGQHTSISTWR L*GRHQKHNILWSQTV PKLWAFWSV*EFC FNNC+SINGLHICTICLEFWFL*AL LQP*SLHMSTAIMVI+ VVS*GLQGSQY*L+IVAQVR LLQQLRKC EV*RL*GLAILVKKLIIIVNIV W+AHQEGCQVSQMKLL+PD*NLWSWQ Subject 6706 EDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVNDFSDFDVLFSDPYQNISVPREAHFIKSKTCRFGKNTCKYLLSFGFDVHSDRSDEVITGSPFELDVEGVLICFGKEAVNLAAAHNSDFKLPCEVRGTTFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*DAFSATCELGQNCYSIDDRLGHWLGAAFPKKVKFAVLRGQHTSISTWRTL*GRHQKHNILWSQTVFPKLWAFWSV*EFCTFNNCDSINGLHICTICLEFWFL*AL*LQP*SLHMSTAIMVIVRVVS*GLQGSQY*LKIVAQVRHLLQQLRKC*EV*RL*GLAILVKKLIIIVNIVRWQAHQEGCQVSQMKLLKPD*NLWSWQ 7848
Range 3: 6711 to 7457 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
506.5 bits(1099) | 0.0 | 219/249(88%) | 0/249(0%) | Minus/Plus |
Query 396 REFHSLYGRRSRHSQPLWEVHQAILSWLCCKREDKHT**VSVCK*HFWF*RVIF*PISKYQCSKGGSLHKVKDLQIW*KYM*VPSVLWF*FA**QV**SDYRFAI*VGC*GCANLLWQGGS*FSGCA*FRFQTSL*GTRCYI*CCYLIEIKGSDLR**ALVLHCCNKT*EEIDHHAVKCLFSNLRIGPKLSPR*RLAWALAWCCIS*ESQICHTQGTTYINFHMEGVIGTAPKA*HIVVPNSHSQALGF 1142 REFHS +GRRSRHS+P WEVHQAILSWLCCKREDKHT *VSVC+* F F*RVI *PISKYQCSKGGSLHKVKDLQ+W KYM*VPS+LWF* A**QV**SDYRF I*VGC*GCANLLWQGGS* CA*FRFQTSL*GTR YI*CCYLIEIK SDL **ALVLHCCNKT*EE+DHHAV+CLFSNLRIGPKL *R AWALAWCCIS*ESQIC TQGTTYINFHME VIGTAPKA*HIVVP+S SQALGF Subject 6711 REFHSFHGRRSRHSKPFWEVHQAILSWLCCKREDKHTR*VSVCE*LF*F*RVIL*PISKYQCSKGGSLHKVKDLQVWQKYM*VPSILWF*CA**QV**SDYRFTI*VGC*GCANLLWQGGS*LGSCA*FRFQTSL*GTRYYI*CCYLIEIKRSDL***ALVLHCCNKT*EEVDHHAVRCLFSNLRIGPKLLLH*R*AWALAWCCIS*ESQICRTQGTTYINFHMEDVIGTAPKA*HIVVPDSLSQALGF 7457
Range 4: 7494 to 7850 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
267.7 bits(578) | 0.0 | 115/119(97%) | 0/119(0%) | Minus/Plus |
Query 3 **Y*RPPYMYYLFGILVLVGAAIATLILAHVDSNNGDNHGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HCHMASPPGRLPGESNEAFEARLKSLELAR 359 **Y*RPPYMYYLFGILVLVGA IATLILAHVDSNNGD+ GCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HC MASPPGRLPGESNEAFEARLKSLELAR Subject 7494 **Y*RPPYMYYLFGILVLVGAVIATLILAHVDSNNGDSKGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HC*MASPPGRLPGESNEAFEARLKSLELAR 7850
Range 5: 6709 to 7662 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
659.1 bits(1432) | 0.0 | 290/318(91%) | 0/318(0%) | Plus/Minus |
Query 191 GHNSQLILTPL*PL*DNHDYHHYCCRHVXXXXXXXXXXXEPEFQTDSTYMEAVNTITIIKGTKFSD*PKSPELGNDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMPKPIVNGVIVLAQFAGC*KGISLHDDQFLPMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSYLTRKFEIGIMRSR*INCLLAKAN*HTLNIQLKWRTCNHFIRPVTMQIKTKGQKVLTCIFTKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYLPFYSTTRRVWLDVPPREVGSVGNAGRKGYETLV 1144 GHN QLILTPL*PL*DN YHHYCCRHVQGLGLQLQRLQEPEFQTDSTYMEAVNTITIIKG KFSD*PKSPELG DCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMPKPIVNGV VLAQFAGC*KGISLHDDQ LPMSCCSNVEPVLII GRI *FQ*GNNIKCSTSYLTRKFEI IMRS +NCLLAKAN*HTLNIQLKW TCNHFIRPVTM IKTKG KVLTCIF K AGL*LYEVSLPWNTDILIWVR+*HVK R V +RQILI+YVYLPFYSTTRRVWLDVPPR+V SVGNAGR+ YETLV Subject 6709 GHNFQLILTPL*PL*DNPYYHHYCCRHVQGLGLQLQRLQEPEFQTDSTYMEAVNTITIIKGAKFSD*PKSPELGKDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDDQLLPMSCCSNVEPVLIIRGRIS*FQ*GNNIKCSTSYLTRKFEI*IMRSCQVNCLLAKAN*HTLNIQLKW*TCNHFIRPVTMHIKTKG*KVLTCIFAKPAGL*LYEVSLPWNTDILIWVRE*HVKIRKVIHRQILIEYVYLPFYSTTRRVWLDVPPRKVWSVGNAGRESYETLV 7662
Range 6: 7705 to 7848 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
109.2 bits(232) | 0.0 | 44/48(92%) | 0/48(0%) | Plus/Minus |
Query 5 LPAPKISVWPQKLHLTHLATFLVGSPYDNVNNDNQFLHQYG*PLKPSN 148 LPAPKISVW QKLHLTHLATFLVG P +NVNNDNQFLHQYG*PLKPSN Subject 7705 LPAPKISVWLQKLHLTHLATFLVGLPSNNVNNDNQFLHQYG*PLKPSN 7848
Range 7: 6707 to 7849 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
720.5 bits(1566) | 0.0 | 347/381(91%) | 0/381(0%) | Minus/Plus |
Query 4 RTRVS*PLRPAFPTLPTSLGGTSSHTLLVVL*KGR*TYLMSICL*VTFLVLTCYFLTHIKISVFQGRLTS*SQRPADLVKIHVSTFCPLVLICIVTGLMK*LQVRHLSWMLRVC*FAXXXXXXXXXXXXXXISNFLVRYEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIGRN*SSCSEMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPKQSFPSSGLFGQSENFVPLIIVIVLTASIYVLSVWNSGSXXXXXXXXXXXXXRQQ*W**SWLSHKGYRGVNIN*ELWPK*GACFNS*GSAGRFEGFRG*PYW*RN*LSLLTLSYGEPTRKVAR*VK*SF*GQTEIFGAGK 1146 +TRVS* RPAFPTL T LGGTSSHTLLVVL*KGR*TY MSICL*+TFL+LTCY LTHIKISVFQGRLTS*SQRPA L KIHVSTF PLVL+CIVTGLMK*LQV HLSWMLRVC*FALARRQL +LRII ISNFLVRYEVLHLMLLPY*NQ IRP MISTGSTLLQQDIGR+*SSCSEMPFQQPANWAKT+TPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGP+QSFPSSGLFGQSENF PLIIVIVLTASIYVLSVWNSGSCRRCNCNPNPCTCRQQ*W** LSHKGYRGVNIN*+LWPK*G CFNS*GS RFEGFRG*PYW*RN*LSLLTL G+PTRKVAR*VK*SF* QTEIFGAGK Subject 6707 KTRVS*LSRPAFPTLQTFLGGTSSHTLLVVL*KGR*TYSMSICL*MTFLILTCYSLTHIKISVFQGRLTS*SQRPAGLAKIHVSTFYPLVLMCIVTGLMK*LQVHHLSWMLRVC*FALARRQLTWQLRIIQISNFLVRYEVLHLMLLPY*NQEIRPLMISTGSTLLQQDIGRS*SSCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPRQSFPSSGLFGQSENFAPLIIVIVLTASIYVLSVWNSGSCRRCNCNPNPCTCRQQ*W***GLSHKGYRGVNIN*KLWPK*GTCFNS*GSVRRFEGFRG*PYW*RN*LSLLTLLDGKPTRKVAR*VK*SF*SQTEIFGAGK 7849
Range 8: 6746 to 7477 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
471.2 bits(1022) | 0.0 | 214/244(88%) | 0/244(0%) | Plus/Minus |
Query 376 KILRLTKKPRAWE*LFGTTICYAFGAVPITPSMWKLMYVVP*VWQI*LS*EMQHXXXXXXXXXXGDSFGPIRRLLKRHFTA**SISSYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLVPHKEV*NRNYAQPLNQLPPCQSKLAHPQHPTQMANL*SLHQTCHYAN*NQRTEGTYMYFHQICRSLTL*SEPPLEH*YFDMGQKITRQNQKCHLQTDTHQVCLSSLLQHNQESMA*CTSQRGWEC 1107 KILRLTKKPRAWE L GTTICYAFGAVPIT SMWKLMYVVP*V QI*LS*EMQHQANAQA RQ +SFGPIRRLLKRH TA**S SSYVLLQQCRTSAYH+RSD LISIR*QHQM*+LVPHKEV*N NYAQ + LPPCQSKLAHPQHPTQM NL*SLHQTCHYA+ NQR EGTYMYF Q CRSLTL*SEPPLEH*YFDMGQ+ITRQNQK H QTDTH+VCLSSLLQHNQESMA*CTSQ+G EC Subject 6746 KILRLTKKPRAWERLSGTTICYAFGAVPITSSMWKLMYVVP*VRQI*LS*EMQHQANAQAYRQWSNSFGPIRRLLKRHLTA**STSSYVLLQQCRTSAYHQRSDLLISIR*QHQM*YLVPHKEV*NLNYAQLPS*LPPCQSKLAHPQHPTQMVNL*SLHQTCHYAHQNQRIEGTYMYFCQTCRSLTL*SEPPLEH*YFDMGQRITRQNQKSHSQTDTHRVCLSSLLQHNQESMA*CTSQKGLEC 7477
Range 9: 7532 to 7852 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
232.5 bits(501) | 0.0 | 104/107(97%) | 0/107(0%) | Plus/Minus |
Query 1 ALASSKDFSLASKASFDSPGNLPGGLAI*QC*Q**SISSPIWLTPKAFKPPSTSLTVEASASLGPQFSINIDSPVALMRQP*LSPLLLSTCARIRVAIAAPTRTRIP 321 ALASSKDFSLASKASFDSPGNLPGGLAI*QC*Q**SISSPIWLTPKAFKPP+TSLTVEASASLGPQFSINIDSPVALMRQP LSPLLLSTCARIRVAI APTRTRIP Subject 7532 ALASSKDFSLASKASFDSPGNLPGGLAI*QC*Q**SISSPIWLTPKAFKPPNTSLTVEASASLGPQFSINIDSPVALMRQPLLSPLLLSTCARIRVAITAPTRTRIP 7852
Nucleotide Sequence (1368 letters)
Query ID: | ds2016-132_4 |
Query definition: | No definition line |
Query length: | 951 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
568.3 | 2923.3 | 28% | 0 | 44% | AY368590.1 | |
850.1 | 4939.8 | 37% | 0 | 53% | AB277788.1 | |
850.1 | 4975.5 | 37% | 0 | 61% | EF105294.1 | |
841.4 | 4918.4 | 37% | 0 | 53% | KR054734.1 | |
754.8 | 4396.2 | 36% | 0 | 59% | KX274274.1 |
Alignments
Rupestris stem pitting associated virus strain Syrah, complete genome
Sequence ID: AY368590.1 Length: 8742 Number of Matches: 15
Range 1: 6544 to 7542 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
568.3 bits(1234) | 0.0 | 237/333(71%) | 0/333(0%) | Plus/Plus |
Query 13 *ALSVWHGASIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDEAFVAFTAGVPDSPNLTGRYIKPYAPGCAVQGKINILDEYLSVSDTSGFDVLFSDPYQNVSIPREAHFIKTRMCRFGTNICKYFQSFGFDVCSDGVDKVVVGSPFELEVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFDVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*NAFSATCQLG*DHNPINHWFGHWVGSALLKEIKSTIFRRQYSPVPTRRALQGRHEECNLLWP*AVIPKLRNIRSV*KFRTSNIGRDSGRFYTCIISLEFW 1011 *ALSVWH IMNNLVKALS FEFVGV+ VL+FPVVVHSVPGSGKSSLIRELI+EDE+F+AFTAGVPD+PNL+GRYIKPY+PGCAV+GKINILDEYLSV+D S FDVLFSDPYQN+S+PREAHFIK++ CRFG N CKY SFGFDV SD D+V+ GSPFEL+VEGVLICFGKEAV+LA AHNSDFKLPCEVRG+TFDVVTLLKSRDPTS+DKHWFY+AATRHR KLIIMQ*+AFSATC+LG + I+ GHW+G+A K++K + R Q++ + T R L GRH++ N+LW V PKL SV*+F T N + C I LEFW Subject 6544 *ALSVWHY*IIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVNDFSDFDVLFSDPYQNISVPREAHFIKSKTCRFGKNTCKYLLSFGFDVHSDRSDEVITGSPFELDVEGVLICFGKEAVNLAAAHNSDFKLPCEVRGTTFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*DAFSATCELGQNCYSIDDRLGHWLGAAFPKKVKFAVLRGQHTSISTWRTL*GRHQKHNILWSQTVFPKLWAFWSV*EFCTFNNCDSINGLHICTICLEFW 7542
Range 2: 7518 to 7883 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
215.5 bits(464) | 0.0 | 95/122(78%) | 0/122(0%) | Plus/Plus |
Query 987 MHYLFGILVLVGVAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTVREVLGGLKALGISHTTEEIDYRC*IG*MASQIGKLPGESNEAFEARLKSLELARAQKQLKGQTHP 1352 M+YLFGILVLVG IA ILAHVD+++G +GC IRATGESILIENCGPSEALASTV+EVLGGLKALG+SH EEIDY C* *MAS G+LPGESNEAFEARLKSLELARAQKQ +G P Subject 7518 MYYLFGILVLVGAVIATLILAHVDSNNGDSKGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HC*MASPPGRLPGESNEAFEARLKSLELARAQKQPEGSNQP 7883
Range 3: 6545 to 7741 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
492.7 bits(1069) | 0.0 | 238/399(60%) | 0/399(0%) | Plus/Plus |
Query 14 RP*VFGMVRVL*II*SKLCLRLNLLVCFVCLNFQLLFTVFQVAVKVA**GSLFLKTRLLWPLQQVCQTVQI*QEGTSSPTLQGVQCKGK*TYLMSTCLSLILLALMCCSQTLTRMSAFQERHTS*KPECVGLVPTSASTFNLLALMFVVMGWIKLL*GRHLNWRLRGSSFALERRP*I*QLHTILTSSCPARCGVQHLTL*RY*SPGIQLQKISIGSTLQPQGIEVN***CSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGHYRDGTKSVTYCGPRQSFPSSGIFGQSENFVPLILVVTLVAFIHALSLWNSGPSRSCNCHPNPCSCRQQ*WQSPRLLY*GHWRVYFD*KLWPKRGPCINSEGGIGRFEGFRN*PYY*R 1210 RP*VFG++R+L*I * KLCLRL+L V C +FQLLF F V VKV ** S LKTR+ + T+Q GTSS TL V KG+*TY MS CL + L L C S T ++S FQ R TS* GL STF L LM +V G +K L HL+W LR FAL RR QL I S+ R V HL L Y*+ I+ IS GSTL Q I +* CS+MPFQQPANWAKT+TPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGG YRDGTKS+TYCGPRQSFPSSG+FGQSENF PLI+V+ L A I+ LS+WNSG R CNC+PNPC+CRQQ*W L + G+ V +*KLWPK G C NS G + RFEGFR *PY+*R Subject 6545 RP*VFGIIRLL*IT*LKLCLRLSLWVFIACSDFQLLFIAFLVVVKVV**ESSLLKTRVS*LSRPAFPTLQTFLGGTSSHTLLVVL*KGR*TYSMSICL*MTFLILTCYSLTHIKISVFQGRLTS*SQRPAGLAKIHVSTFYPLVLMCIVTGLMK*LQVHHLSWMLRVC*FALARRQLTWQLRIIQISNFLVRYEVLHLMLLPY*NQEIRPLMISTGSTLLQQDIGRS*SSCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPRQSFPSSGLFGQSENFAPLIIVIVLTASIYVLSVWNSGSCRRCNCNPNPCTCRQQ*W***GLSHKGYRGVNIN*KLWPK*GTCFNS*GSVRRFEGFRG*PYW*R 7741
Range 4: 7801 to 7863 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
34.1 bits(68) | 0.0 | 13/21(62%) | 0/21(0%) | Plus/Plus |
Query 1270 NQMRRLKPGLNHWSWLELKSN 1332 +QM+ LKP N WSW ELKS+ Subject 7801 SQMKLLKPD*NLWSWQELKSS 7863
Range 5: 6641 to 7882 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
393.8 bits(853) | 0.0 | 215/414(52%) | 0/414(0%) | Minus/Minus |
Query 110 GCVWPFSCF*ALANSSDLSRASNASFDSPGSLPI*LAI*PI*QR*SISSVVWLIPKAFKPPNTSLTVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIATPTRTRIPKR*CMYKSDQSHDQY*RYEIFRLTEYS*AWE*LPRATIGYTLRAVPVMPSVWELVNIVS*IW*I*FP*EVQNQPNAQTNG*WGYGLSPVGRLLKRHFTALLSVYFDALWLQRRTNAYLLKLDPWTSITSQRQMLNPAPRRAT*SQNCVQLLDLRPPFQSK*GPPQPPVQMATLQQLYPPHHYKHQSQKIESTCRCWYQTYTFWFL*SVPLLEC*HSGKGLRTAHQSQKYQRQTSTHQVCLFSLALHTLERRA*CTFLSDLDCLAHLL*RPQKPRLQK*APLLGYFYRYLEHCEQQLE 1351 G + P CF*ALA+S D S AS ASFDSPG+LP LAI* *Q *SISS +WL PKAFKPPNTSLTV+A ASLGPQFSI IDSPVAL++QP PLLLST ARI +AI PTRTRIP R* +Y + Y*R +I RLT+ AWE L TI Y AVP+ S+W+L+ +V *+ I* *E+Q+Q NAQ W P+ RLLKRH TA S L Q RT+AY + D SI Q QM P + *+ N QL PP QSK PQ P QM L L+ HY HQ+Q+IE T + QT L*S P LE *+ G R Q+QK QT TH+VCL SL H E A*CT L+C *+ RLQ *A L YFY Y E EQQLE Subject 6641 GWLEPSGCF*ALASSKDFSLASKASFDSPGNLPGGLAI*QC*Q**SISSPIWLTPKAFKPPNTSLTVEASASLGPQFSINIDSPVALMRQPLLSPLLLSTCARIRVAITAPTRTRIPNR*YIYGGR*YYHNY*RCKILRLTKKPRAWERLSGTTICYAFGAVPITSSMWKLMYVVP*VRQI*LS*EMQHQANAQAYRQWSNSFGPIRRLLKRHLTA**STSSYVLLQQCRTSAYHQRSDLLISIR*QHQM*YLVPHKEV*NLNYAQLPS*LPPCQSKLAHPQHPTQMVNL*SLHQTCHYAHQNQRIEGTYMYFCQTCRSLTL*SEPPLEH*YFDMGQRITRQNQKSHSQTDTHRVCLSSLLQHNQESMA*CTSQKGLECRERRP*KL*NSRLQ**ALLSNYFYHYQERYEQQLE 7882
Range 6: 6540 to 6614 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
44.6 bits(91) | 0.0 | 20/25(80%) | 0/25(0%) | Minus/Minus |
Query 9 NSNADKALTKLFIILAPCQTLKA*T 83 NSN DKALTKLFII+ CQTLKA*+ Subject 6540 NSNVDKALTKLFIII**CQTLKA*S 6614
Range 7: 6655 to 7731 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
388.7 bits(842) | 0.0 | 192/359(53%) | 0/359(0%) | Minus/Minus |
Query 124 YG*FLKPSNLPIPPSLLMQGPRLGHNFQSK*TLQWP**SNLGDCHYCCLHEXXXXXXXXXXXGPEFQRDNACIKATRVTTNIRGTKFSD*PNIPELGNDCLGPQ*VTLFVPSL*CPPCGNW*ILSPEYGRFDFLKKCRTNPMPKPMVNGVMVLAQLAGC*KGILLHYYQFTSMPCGCNVEPMLIF*SWIPGLQ*RHNVKC*TPHLAGQLEVRIVCNC*IYGLLSKANEDPLNLQFKWRPYNNFIHPITTNIKAKRLKVLADVGTKPTHSGFYEVCLSWNADILVRV*EQHIKARSIRDRQVLIKYVYFPLHCTPWSVGLDVPSCQIWTVWHTCCKGHKSLVFRNKLPY*ATFTATWNTV 1200 YG* LKPSNL P LL Q P LGHNFQ T P * N HYCC H QG G QLQ L PEFQ D+ ++A T I+G KFSD*P PELG DCLGPQ V L VPSL* PPCGN +LSPEYG+FDFL+KC T PMPKP+VNGV VLAQ AGC*KGI LH Q M C NVEP+LI I Q* +N+KC T +L + E+ I+ +C + LL+KAN LN+Q KW N+FI P+T +IK K KVL + KP YEV L WN DIL+ V E H+K R + RQ+LI+YVY P + T V LDVP ++W+V + + +++LVF N+L Y TFT T N + Subject 6655 YG*PLKPSNLLTLP*LLKQVPHLGHNFQLILTPL*PL*DNPYYHHYCCRHVQGLGLQLQRLQEPEFQTDSTYMEAVNTITIIKGAKFSD*PKSPELGKDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDDQLLPMSCCSNVEPVLIIRGRIS*FQ*GNNIKCSTSYLTRKFEI*IMRSCQVNCLLAKAN*HTLNIQLKW*TCNHFIRPVTMHIKTKG*KVLTCIFAKPAGL*LYEVSLPWNTDILIWVRE*HVKIRKVIHRQILIEYVYLPFYSTTRRVWLDVPPRKVWSVGNAGRESYETLVFSNELSYQTTFTTTRNAM 7731
Range 8: 6544 to 6606 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
39.1 bits(79) | 0.0 | 16/21(76%) | 0/21(0%) | Minus/Minus |
Query 13 RRQSFD*IIHNTRTMPNT*GL 75 RRQSF+*+IHN MPNT*GL Subject 6544 RRQSFN*VIHNNLIMPNT*GL 6606
Range 9: 7804 to 7860 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
22.1 bits(42) | 0.0 | 11/19(58%) | 0/19(0%) | Minus/Minus |
Query 1273 AFEL*PTPVI*AGLQTPHL 1329 AFEL P P I LQ HL Subject 7804 AFELLPAPKISVWLQKLHL 7860
Range 10: 6717 to 7271 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
273.2 bits(590) | 0.0 | 130/185(70%) | 0/185(0%) | Minus/Minus |
Query 186 PSWQVAEKAFYCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTSNVEPRTSQGNLKSELCATARSTASFPKQMRTPSTSSSNGDXXXXXXXXXXXXSKPKD*KYLQMLVPNLHILVFMKCASLGMLTFW*GSENSTSKPEVSETDKYSSSMFIFPCTAHPGA*GLMYLPVRFGLSGTPAVKATK 740 P+ QVAEKA +C++I+ CLVAA *NQCLSSEVGSLDFN VTTSNV PRTSQG+LKSELCA A+ TAS PKQ+ TPSTS+SNG+P T S SL TSKPKD +YL + +PNL + FMK ASLG L F GSEN+TSK E S TD+YSSSMFIFP TA PG GLMYLP RFG+SGTPAVKA K Subject 6717 PNSQVAEKASHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVVPRTSQGSLKSELCAAAKLTASLPKQISTPSTSNSNGEPVITSSDLSLCTSKPKDRRYLHVFLPNLQVFDFMK*ASLGTLIF*YGSENNTSKSEKSFTDRYSSSMFIFPFTAQPGEYGLMYLPERFGVSGTPAVKAMK 7271
Range 11: 7299 to 7832 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
137.2 bits(293) | 0.0 | 79/178(44%) | 0/178(0%) | Minus/Minus |
Query 768 FKPGFKRLI*FAGEXXXXXXXXXXXXTIINFFSSMANS*SLQTSQYLPHC*CKGLAWATIFNQNRLSSGPNKATLVTATTVVYMSKDLDGNCNSY*DQNSKEIMHV*KRPESRPILEVRNFQTDRIFLSLGMTA*GHNRLHSSCRPCNALRVGTGEYCLLNMVDLISLRSAEPTQCPN 1301 F+ GFK I* + + HLT LT IINFF++MAN *SLQTS + +C* K L WATIFN L P + TL V M KD N ++Y +QNSK+I+H+ + +L+V+N QTD+ SLG T HN L CRP N L V C L+ +L L +A P+QCP+ Subject 7299 FQSGFKSFI*LTWQPSWWACHLTMLTMIINFFTNMANP*SLQTS*HFLNC*SKCLTWATIFN*Y*LPCSPYETTLTITIIAVDMCKD*GCNYSAYKNQNSKQIVHIWRPLILSQLLKVQNSQTDQKAQSLGKTVWDHNMLCFWCRPYNVLHVEIDVCCPLSTANLTFLGNAAPSQCPS 7832
Range 12: 6545 to 6595 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
29.0 bits(57) | 0.0 | 13/17(76%) | 0/17(0%) | Minus/Minus |
Query 14 L*LNYS*YSHHAKHLRP 64 L*L+YS* S++AKHLRP Subject 6545 L*LSYS**SNNAKHLRP 6595
Range 13: 6675 to 7475 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
208.6 bits(449) | 0.0 | 121/267(45%) | 0/267(0%) | Plus/Plus |
Query 144 *K*PNKGAYF*RRGFCGLYSRCARQSKSDRKVHQALRSRVCSARENKHT**VLVCL*YFWL*CAVLRPLPECQHSKRGTLHKNQNV*VWYQHLQVLSIFWL*CL**WGG*SCCRVAI*TGG*GGPHLLWKGGRRSSSCTQF*LQVALRGAGFNI*RCDVIEVQGSNFRR*ALVLRCSHKASK*TDNNAVKCLFSNLPTGLRP*PH*PLVWALGWFCTS*GNQIYHIQETIFTSSHTEGITGTARRV*PIVALGSHSQAQEYSVSLKI 944 *K* +K A++*RR F + R +R SK +VHQA+ S +C RE+KHT *V VC * F * +L P+ + Q SK G+LHK +++ VW +++ V SI W *C ** *S R I* G *G +LLW+GG SC F Q +L G + I* C +IE++ S+ *ALVL C +K + D++AV+CLFSNL G + H* WAL W C S* +QI Q T + + H E + GTA + * IV S SQA + VSL+I Subject 6675 *K*FDKRAHY*RREFHSFHGRRSRHSKPFWEVHQAILSWLCCKREDKHTR*VSVCE*LF*F*RVIL*PISKYQCSKGGSLHKVKDLQVWQKYM*VPSILWF*CA**QV**SDYRFTI*VGC*GCANLLWQGGS*LGSCA*FRFQTSL*GTRYYI*CCYLIEIKRSDL***ALVLHCCNKT*EEVDHHAVRCLFSNLRIGPKLLLH*R*AWALAWCCIS*ESQICRTQGTTYINFHMEDVIGTAPKA*HIVVPDSLSQALGFLVSLRI 7475
Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: Ham1
Sequence ID: AB277788.1 Length: 2876 Number of Matches: 11
Range 1: 897 to 2114 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
850.1 bits(1849) | 0.0 | 367/406(90%) | 0/406(0%) | Minus/Minus |
Query 110 F*ALANSSDLSRASNASFDSPGSLPI*LAI*PI*QR*SISSVVWLIPKAFKPPNTSLTVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIATPTRTRIPKR*CMYKSDQSHDQY*RYEIFRLTEYS*AWE*LPRATIGYTLRAVPVMPSVWELVNIVS*IW*I*FP*EVQNQPNAQTNG*WGYGLSPVGRLLKRHFTALLSVYFDALWLQRRTNAYLLKLDPWTSITSQRQMLNPAPRRAT*SQNCVQLLDLRPPFQSK*GPPQPPVQMATLQQLYPPHHYKHQSQKIESTCRCWYQTYTFWFL*SVPLLEC*HSGKGLRTAHQSQKYQRQTSTHQVCLFSLALHTLERRA*CTFLSDLDCLAHLL*RPQKPRLQK*APLLGYFYRYLEHCEQQLE 1327 F LANS LS AS ASFDSPG+ P *LAI Q *SI S WL PKAF+PPNTSLTV ARASLGPQFSI IDSPVAL+KQP LPLLLST ARIWMAIATPTRTRIPKR*CMYKSDQSHDQY*RYEIFRLTEYS*AWE*LPRATIGY LRAVPVMPSVWELVNI+S*IW*I*FP*EVQNQPNAQTN *W YGLSPVGRLLKRHFTALLS+YFDALWLQRRTNAYLL+LDPWTSITS RQMLNPA RRAT*SQNCVQLLDLRPPFQSK* PPQPPVQMATLQQLYPPHHYKH SQKIE TCRCWYQTY FWFL*SVPLLEC*HSGKGLRTAHQSQKYQRQTSTHQVCLFSLALHTLERRA*CTFL DLDCLAHLL*RPQKPRLQK*APLLGYFY YLEHCEQQLE Subject 897 FWVLANSKALSLASYASFDSPGNFPT*LAIQLSQQL*SILSTFWLTPKAFRPPNTSLTVAARASLGPQFSISIDSPVALMKQP*WLPLLLSTCARIWMAIATPTRTRIPKR*CMYKSDQSHDQY*RYEIFRLTEYS*AWE*LPRATIGYALRAVPVMPSVWELVNIIS*IW*I*FP*EVQNQPNAQTNS*WSYGLSPVGRLLKRHFTALLSIYFDALWLQRRTNAYLLELDPWTSITSLRQMLNPALRRAT*SQNCVQLLDLRPPFQSK*EPPQPPVQMATLQQLYPPHHYKH*SQKIEGTCRCWYQTYRFWFL*SVPLLEC*HSGKGLRTAHQSQKYQRQTSTHQVCLFSLALHTLERRA*CTFLLDLDCLAHLL*RPQKPRLQK*APLLGYFYHYLEHCEQQLE 2114
Range 2: 796 to 870 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
56.1 bits(116) | 0.0 | 24/25(96%) | 0/25(0%) | Minus/Minus |
Query 9 NSNADKALTKLFIILAPCQTLKA*T 83 NSNADKALTKLFIIL PCQTLKA*T Subject 796 NSNADKALTKLFIILTPCQTLKA*T 870
Range 3: 799 to 1731 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
646.2 bits(1404) | 0.0 | 293/311(94%) | 0/311(0%) | Plus/Plus |
Query 12 LGLKCLAWCEYYE*FSQSFVCV*ICWCVLXXXXXXXXXXXXR*R*K*PNKGAYF*RRGFCGLYSRCARQSKSDRKVHQALRSRVCSARENKHT**VLVCL*YFWL*CAVLRPLPECQHSKRGTLHKNQNV*VWYQHLQVLSIFWL*CL**WGG*SCCRVAI*TGG*GGPHLLWKGGRRSSSCTQF*LQVALRGAGFNI*RCDVIEVQGSNFRR*ALVLRCSHKASK*TDNNAVKCLFSNLPTGLRP*PH*PLVWALGWFCTS*GNQIYHIQETIFTSSHTEGITGTARRV*PIVALGSHSQAQEYSVSLKI 944 LGLKCLAWCEYYE* SQSFVCV*ICW VLC *ISSCCSQCSR* *K*PNKGA+F*RRGFCGL+SRCARQSKS+RKVHQALRSRVCSARENKHT**VLVCL*YFWL*CAVLRPLPECQHSKRGTLHKNQN+*VWYQHLQV SIFWL*CL**WGG*SCCRVAI*TGG*GG HLLWKGGRRSSSCTQF*LQVALR AGFNI*R DVIEVQGSN RR*ALVLRCSHKASK* DNNAVKCLFSNLPTGLRP* H* LVWALGWFCTS*GNQIYHIQE IFTSSHTEGITGTARR *PIVALGSHSQAQEYSVSLKI Subject 799 LGLKCLAWCEYYE*LSQSFVCV*ICWRVLCT*ISSCCSQCSR*W*K*PNKGAHF*RRGFCGLHSRCARQSKSNRKVHQALRSRVCSARENKHT**VLVCL*YFWL*CAVLRPLPECQHSKRGTLHKNQNL*VWYQHLQVPSIFWL*CL**WGG*SCCRVAI*TGG*GGSHLLWKGGRRSSSCTQF*LQVALRSAGFNI*RSDVIEVQGSNSRR*ALVLRCSHKASK*IDNNAVKCLFSNLPTGLRP*LH*LLVWALGWFCTS*GNQIYHIQEIIFTSSHTEGITGTARRA*PIVALGSHSQAQEYSVSLKI 1731
Range 4: 1774 to 2139 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
228.3 bits(492) | 0.0 | 98/122(80%) | 0/122(0%) | Plus/Plus |
Query 987 MHYLFGILVLVGVAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTVREVLGGLKALGISHTTEEIDYRC*IG*MASQIGKLPGESNEAFEARLKSLELARAQKQLKGQTHP 1352 MHYLFGILVLVGVAIAIQILAHVD+SSG+HQGCFIRATGESILIENCGPSEALA+TV+EVLGGLKALG+S ++IDY C* *MASQ+GKLPGESNEA+EARLK+LELAR QK + P Subject 1774 MHYLFGILVLVGVAIAIQILAHVDSSSGNHQGCFIRATGESILIENCGPSEALAATVKEVLGGLKALGVSQKVDKIDYSC*DS*MASQVGKLPGESNEAYEARLKALELARTQKAPEVSNQP 2139
Range 5: 798 to 1985 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
831.8 bits(1809) | 0.0 | 357/396(90%) | 0/396(0%) | Plus/Plus |
Query 11 FRP*VFGMVRVL*II*SKLCLRLNLLVCFVCLNFQLLFTVFQVAVKVA**GSLFLKTRLLWPLQQVCQTVQI*QEGTSSPTLQGVQCKGK*TYLMSTCLSLILLALMCCSQTLTRMSAFQERHTS*KPECVGLVPTSASTFNLLALMFVVMGWIKLL*GRHLNWRLRGSSFALERRP*I*QLHTILTSSCPARCGVQHLTL*RY*SPGIQLQKISIGSTLQPQGIEVN***CSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGHYRDGTKSVTYCGPRQSFPSSGIFGQSENFVPLILVVTLVAFIHALSLWNSGPSRSCNCHPNPCSCRQQ*WQSPRLLY*GHWRVYFD*KLWPKRGPCINSEGGIGRFEGFRN*P 1198 FRP*VFGMV VL*I *SKLCLRLNLL CFV LNFQLLFTVFQV VKVA**GS FLKTRLLWP QQVCQTVQI*QEGTSSPTLQGVQCKGK*TYLMSTCLSLILLALMCCSQTLTRMSAFQERHTS*KP+ VGLVPT ASTFNLLALMFVVMGWIKLL*GRHLNWRLRG SFALERRP*I*QLHTILTSSCPA+CGVQHLT *RY*SPGIQLQKISIGSTLQPQGIEVN***CSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGHYRDGTKS+TYCGPRQSFPSSGIFGQSENFVPLILVVTLVAFIHALSLWNSGPSRSCNCHPNPC+CRQQ*WQ RL + H + +*+LW +RGP S+ G+GR +GFR *P Subject 798 FRP*VFGMV*VL*IT*SKLCLRLNLLACFVYLNFQLLFTVFQVVVKVA**GSSFLKTRLLWPSQQVCQTVQI*QEGTSSPTLQGVQCKGK*TYLMSTCLSLILLALMCCSQTLTRMSAFQERHTS*KPKPVGLVPTPASTFNLLALMFVVMGWIKLL*GRHLNWRLRGFSFALERRP*I*QLHTILTSSCPAKCGVQHLT**RY*SPGIQLQKISIGSTLQPQGIEVN***CSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGHYRDGTKSITYCGPRQSFPSSGIFGQSENFVPLILVVTLVAFIHALSLWNSGPSRSCNCHPNPCTCRQQ*WQPSRLFHKSHRGINTN*ELWAERGPSCYSQRGVGRSKGFRG*P 1985
Range 6: 794 to 1831 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
795.1 bits(1729) | 0.0 | 334/346(97%) | 0/346(0%) | Plus/Plus |
Query 7 VV*ALSVWHGASIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDEAFVAFTAGVPDSPNLTGRYIKPYAPGCAVQGKINILDEYLSVSDTSGFDVLFSDPYQNVSIPREAHFIKTRMCRFGTNICKYFQSFGFDVCSDGVDKVVVGSPFELEVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFDVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*NAFSATCQLG*DHNPINHWFGHWVGSALLKEIKSTIFRRQYSPVPTRRALQGRHEECNLLWP*AVIPKLRNIRSV*KFRTSNIGRDSGRFYTCIISLEFWS**ELQLPSKS 1044 +V*ALSVWHG SIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDEAFVAFTAGVPDSPNLTGRYIKPYAPGCAVQGKINILDEYLSVSDTSGFDVLFSDPYQNVSIPREAHFIKT+ CRFGTN CKY QSFGF+VCSDGVDKVVVGSPFELEVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFDVVTLLKSRDPT EDKHWFYVAATRHRSKLIIMQ*NAFSATCQLG*DHN IN+WFGHWVGSALLKEIKSTIFRR YSPVPTRRALQGRHEE NLLWP*AVIPKLRNIRSV*KFRTSNIGRDSGRFYTCIISLEFWS**ELQLPSKS Subject 794 IV*ALSVWHGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDEAFVAFTAGVPDSPNLTGRYIKPYAPGCAVQGKINILDEYLSVSDTSGFDVLFSDPYQNVSIPREAHFIKTKTCRFGTNTCKYLQSFGFNVCSDGVDKVVVGSPFELEVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFDVVTLLKSRDPTPEDKHWFYVAATRHRSKLIIMQ*NAFSATCQLG*DHNSINYWFGHWVGSALLKEIKSTIFRR*YSPVPTRRALQGRHEEHNLLWP*AVIPKLRNIRSV*KFRTSNIGRDSGRFYTCIISLEFWS**ELQLPSKS 1831
Range 7: 1883 to 1984 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
30.4 bits(60) | 0.0 | 18/34(53%) | 0/34(0%) | Plus/Plus |
Query 1096 PLESLF*LKIVAQARPLHQQ*GRYWEV*RL*ELA 1197 P + +*L+IV +ARP Q R W V*RL* LA Subject 1883 PPGNQY*LRIVGRARP*LLQSKRCWAV*RL*GLA 1984
Range 8: 911 to 1987 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
746.6 bits(1623) | 0.0 | 319/359(89%) | 0/359(0%) | Minus/Minus |
Query 124 YG*FLKPSNLPIPPSLLMQGPRLGHNFQSK*TLQWP**SNLGDCHYCCLHEXXXXXXXXXXXGPEFQRDNACIKATRVTTNIRGTKFSD*PNIPELGNDCLGPQ*VTLFVPSL*CPPCGNW*ILSPEYGRFDFLKKCRTNPMPKPMVNGVMVLAQLAGC*KGILLHYYQFTSMPCGCNVEPMLIF*SWIPGLQ*RHNVKC*TPHLAGQLEVRIVCNC*IYGLLSKANEDPLNLQFKWRPYNNFIHPITTNIKAKRLKVLADVGTKPTHSGFYEVCLSWNADILVRV*EQHIKARSIRDRQVLIKYVYFPLHCTPWSVGLDVPSCQIWTVWHTCCKGHKSLVFRNKLPY*ATFTATWNTV 1200 +G* LKP + P P L GPR HN Q +W *++L CHYCCLH QGFGWQLQLLLGPEFQRDNACIKATRVTTNIRGTKFSD*PNIPELGNDCLGPQ*V LFVPSL*CPPCGNW*ILSPEYGRFDFLKKCRTNPMPKP+VNGVMVLAQLAGC*KGILLHYYQFTSMPCGCNVEPMLIF SWIPGLQ*RH VKC*TPH AGQLEVRIVCNC*IYGLLSKANE+PLNLQFKWRPYNNFIHPITTNIKAKRLKVLA VGTKPT GFYEVCLSWNADILVRV*EQHIKARSIRDRQVLIKYVYFPLHCTPWSVGLDVPSC IWTVWHTCC+GHKSLVFRN+LPY*ATFT TWNTV Subject 911 FG*PLKPLDRPTPL*L*QLGPRSAHNSQLVLIPRWLL*NSLDGCHYCCLHVQGFGWQLQLLLGPEFQRDNACIKATRVTTNIRGTKFSD*PNIPELGNDCLGPQ*VMLFVPSL*CPPCGNW*ILSPEYGRFDFLKKCRTNPMPKPIVNGVMVLAQLAGC*KGILLHYYQFTSMPCGCNVEPMLIFWSWIPGLQ*RHYVKC*TPHFAGQLEVRIVCNC*IYGLLSKANENPLNLQFKWRPYNNFIHPITTNIKAKRLKVLAGVGTKPTGFGFYEVCLSWNADILVRV*EQHIKARSIRDRQVLIKYVYFPLHCTPWSVGLDVPSC*IWTVWHTCCEGHKSLVFRNELPY*ATFTTTWNTV 1987
Range 9: 794 to 862 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
50.6 bits(104) | 0.0 | 20/23(87%) | 0/23(0%) | Minus/Minus |
Query 7 RRQSFD*IIHNTRTMPNT*GLNN 75 RRQSFD*+IHNT TMPNT*GLN+ Subject 794 RRQSFD*VIHNTHTMPNT*GLND 862
Range 10: 970 to 2064 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
661.3 bits(1437) | 0.0 | 315/365(86%) | 0/365(0%) | Minus/Minus |
Query 183 I*FAGEXXXXXXXXXXXXTIINFFSSMANS*SLQTSQYLPHC*CKGLAWATIFNQNRLSSGPNKATLVTATTVVYMSKDLDGNCNSY*DQNSKEIMHV*KRPESRPILEVRNFQTDRIFLSLGMTA*GHNRLHSSCRPCNALRVGTGEYCLLNMVDLISLRSAEPTQCPNQWLMGLWS*PSWQVAEKAFYCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTSNVEPRTSQGNLKSELCATARSTASFPKQMRTPSTSSSNGDXXXXXXXXXXXXSKPKD*KYLQMLVPNLHILVFMKCASLGMLTFW*GSENSTSKPEVSETDKYSSSMFIFPCTAHPGA*GLMYLPVRFGLSGTPAVKATKA 1277 I*FA + +NLTRH T TT+INF + +AN *SL T+Q+L C GLA TI N G + L+ ATT VYM KDLDGNCNSY*DQNSKEIMHV*KRPESRPILEVRNFQTDRIFLSLGMTA*GHNRL SSCRPCNALRVGTGEY LLNMVDLISLRSAEPTQCPNQ LM LWS*PSWQVAEKAFYCIII+LLRCLVAAT*NQCLSS VGSLDFNNVTTSNVEPRTSQGNLKSELCATARSTASFPKQMRTPSTSSSNGDPTTTLSTPSLQT KPKD*+YLQ+LVPNL +LVFMKCASLGMLTFW*GSENSTSKPEVSETDKYSSSMFIFPCTAHPGA*GLMYLPVRFGLSGTPAVKATKA Subject 970 I*FARQFSNLTRHSTVSTTVINFINLLANP*SL*TAQHLFDCSS*GLARPTILN*Y*FPGGSYETALMVATTAVYMCKDLDGNCNSY*DQNSKEIMHV*KRPESRPILEVRNFQTDRIFLSLGMTA*GHNRLCSSCRPCNALRVGTGEYYLLNMVDLISLRSAEPTQCPNQ*LMELWS*PSWQVAEKAFYCIIINLLRCLVAAT*NQCLSSGVGSLDFNNVTTSNVEPRTSQGNLKSELCATARSTASFPKQMRTPSTSSSNGDPTTTLSTPSLQTLKPKD*RYLQVLVPNLQVLVFMKCASLGMLTFW*GSENSTSKPEVSETDKYSSSMFIFPCTAHPGA*GLMYLPVRFGLSGTPAVKATKA 2064
Rupestris stem pitting associated virus isolate RSP47 4 replicase gene, partial cds; triple gene block protein 1, triple gene block protein 2, and triple gene block protein 3 genes, complete cds; and capsid protein gene, partial cds
Sequence ID: EF105294.1 Length: 2680 Number of Matches: 11
Range 1: 921 to 2138 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
850.1 bits(1849) | 0.0 | 370/406(91%) | 0/406(0%) | Minus/Minus |
Query 110 F*ALANSSDLSRASNASFDSPGSLPI*LAI*PI*QR*SISSVVWLIPKAFKPPNTSLTVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIATPTRTRIPKR*CMYKSDQSHDQY*RYEIFRLTEYS*AWE*LPRATIGYTLRAVPVMPSVWELVNIVS*IW*I*FP*EVQNQPNAQTNG*WGYGLSPVGRLLKRHFTALLSVYFDALWLQRRTNAYLLKLDPWTSITSQRQMLNPAPRRAT*SQNCVQLLDLRPPFQSK*GPPQPPVQMATLQQLYPPHHYKHQSQKIESTCRCWYQTYTFWFL*SVPLLEC*HSGKGLRTAHQSQKYQRQTSTHQVCLFSLALHTLERRA*CTFLSDLDCLAHLL*RPQKPRLQK*APLLGYFYRYLEHCEQQLE 1327 F ALANS LS AS ASFDSPG+ P *LAI Q * ISS WL PKAF+PPNTSLTV ARASLGPQFSI IDSPVAL+KQP LPLLLST ARIWMAIATPTRTRIPKR* MYKSDQSHDQY*RYEIFRLTEYS*AWE*LPRATIGYTLRAVPVMPSVWELVNIVS*IW I*FP*EVQNQPNAQTN *W YGLSPVGRLLKRHFTALLSVYFDALWLQRRTNAYLLKLDPWTSIT QRQMLNPAPRRAT*SQNCVQLLDL+PPFQSK* PPQPPVQMATLQQLYPPHHYKH SQKIE TCRCWYQTY FWFL*SVP LEC*HSGKGLRTAHQSQKYQRQTSTHQVCLFSLALHTLERRA*CT LSDLDCLAHLL*RPQKPRLQK*APLLGYFYRYLEHCEQQLE Subject 921 FWALANSKALSLASYASFDSPGNFPT*LAIQLSQQL*LISSTFWLTPKAFRPPNTSLTVAARASLGPQFSITIDSPVALMKQP*WLPLLLSTCARIWMAIATPTRTRIPKR*RMYKSDQSHDQY*RYEIFRLTEYS*AWE*LPRATIGYTLRAVPVMPSVWELVNIVS*IWQI*FP*EVQNQPNAQTNS*WSYGLSPVGRLLKRHFTALLSVYFDALWLQRRTNAYLLKLDPWTSITLQRQMLNPAPRRAT*SQNCVQLLDLQPPFQSK*EPPQPPVQMATLQQLYPPHHYKH*SQKIEGTCRCWYQTYRFWFL*SVPPLEC*HSGKGLRTAHQSQKYQRQTSTHQVCLFSLALHTLERRA*CTSLSDLDCLAHLL*RPQKPRLQK*APLLGYFYRYLEHCEQQLE 2138
Range 2: 820 to 894 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.3 bits(110) | 0.0 | 23/25(92%) | 0/25(0%) | Minus/Minus |
Query 9 NSNADKALTKLFIILAPCQTLKA*T 83 NS ADKALTKLFIIL PCQTLKA*T Subject 820 NSKADKALTKLFIILTPCQTLKA*T 894
Range 3: 820 to 1755 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
665.0 bits(1445) | 0.0 | 298/312(96%) | 0/312(0%) | Plus/Plus |
Query 9 CLGLKCLAWCEYYE*FSQSFVCV*ICWCVLXXXXXXXXXXXXR*R*K*PNKGAYF*RRGFCGLYSRCARQSKSDRKVHQALRSRVCSARENKHT**VLVCL*YFWL*CAVLRPLPECQHSKRGTLHKNQNV*VWYQHLQVLSIFWL*CL**WGG*SCCRVAI*TGG*GGPHLLWKGGRRSSSCTQF*LQVALRGAGFNI*RCDVIEVQGSNFRR*ALVLRCSHKASK*TDNNAVKCLFSNLPTGLRP*PH*PLVWALGWFCTS*GNQIYHIQETIFTSSHTEGITGTARRV*PIVALGSHSQAQEYSVSLKI 944 CLGLKCLAWCEYYE* SQSFVC *ICWCVLC *ISSCCSQCSR*R*K*PNKGA+F*RRGFCGLYSRCARQSKSDR+VHQALRSRVCSARENKHT**VLVCL*YFWL*CAVLRPLPECQHSK GTLHKNQN+*VWYQHLQV SIFWL*CL**WGG*SCCRVAI*TGG*GG HLLWKGG RSSSCTQF*LQVALRGAGFNI*RC+VIEVQGSNFRR*ALVLRCSHKASK*TDNNAVKCLFSNLPTGLRP* H* LVWALGWFCTS*GNQI HIQETIFTSSHTEGITGTARRV*PIVALGSHSQAQEYSVSLKI Subject 820 CLGLKCLAWCEYYE*LSQSFVCF*ICWCVLCT*ISSCCSQCSR*R*K*PNKGAHF*RRGFCGLYSRCARQSKSDREVHQALRSRVCSARENKHT**VLVCL*YFWL*CAVLRPLPECQHSKGGTLHKNQNL*VWYQHLQVPSIFWL*CL**WGG*SCCRVAI*TGG*GGSHLLWKGGCRSSSCTQF*LQVALRGAGFNI*RCNVIEVQGSNFRR*ALVLRCSHKASK*TDNNAVKCLFSNLPTGLRP*LH*LLVWALGWFCTS*GNQICHIQETIFTSSHTEGITGTARRV*PIVALGSHSQAQEYSVSLKI 1755
Range 4: 1798 to 2163 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
224.7 bits(484) | 0.0 | 97/122(80%) | 0/122(0%) | Plus/Plus |
Query 987 MHYLFGILVLVGVAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTVREVLGGLKALGISHTTEEIDYRC*IG*MASQIGKLPGESNEAFEARLKSLELARAQKQLKGQTHP 1352 M YLFGILVLVGVAIAIQILAHVD+SSG+HQGCFIRATGESI+IENCGPSEALA+TV+EVLGGLKALG+S +EI+Y C* *MASQ+GKLPGESNEA+EARLK+LELARAQK + P Subject 1798 MRYLFGILVLVGVAIAIQILAHVDSSSGNHQGCFIRATGESIVIENCGPSEALAATVKEVLGGLKALGVSQKVDEINYSC*DS*MASQVGKLPGESNEAYEARLKALELARAQKAPEVSNQP 2163
Range 5: 819 to 2009 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
831.3 bits(1808) | 0.0 | 360/397(91%) | 0/397(0%) | Plus/Plus |
Query 8 LFRP*VFGMVRVL*II*SKLCLRLNLLVCFVCLNFQLLFTVFQVAVKVA**GSLFLKTRLLWPLQQVCQTVQI*QEGTSSPTLQGVQCKGK*TYLMSTCLSLILLALMCCSQTLTRMSAFQERHTS*KPECVGLVPTSASTFNLLALMFVVMGWIKLL*GRHLNWRLRGSSFALERRP*I*QLHTILTSSCPARCGVQHLTL*RY*SPGIQLQKISIGSTLQPQGIEVN***CSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGHYRDGTKSVTYCGPRQSFPSSGIFGQSENFVPLILVVTLVAFIHALSLWNSGPSRSCNCHPNPCSCRQQ*WQSPRLLY*GHWRVYFD*KLWPKRGPCINSEGGIGRFEGFRN*P 1198 LFRP*VFGMV VL*I *SKLCL LNLLVCFV LNFQLLFTVFQVAVKVA**GS FLKTRLLWPLQQVCQTVQI*Q GTSSPTLQGVQCKGK*TYLMSTCLSLILLALMCCSQTLTRMSAFQ RHTS*KP+ VGLVPT ASTFNLLALMFVVMGWIKLL*GRHLNWRLRG SFALERR *I*QLHTILTSSCPARCGVQHLTL*RY*SPGIQLQKISIGSTLQPQGIEVN***CSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGHYRDGTKS+TYCGPRQSFPSSGIFGQSENFVPLILVVTLVAFIHALSLWNSGPSRSCNCHPNPC+CRQQ*WQ RL + H V +*+LW +RGP S+ G+GR +GFR *P Subject 819 LFRP*VFGMV*VL*IT*SKLCLLLNLLVCFVYLNFQLLFTVFQVAVKVA**GSSFLKTRLLWPLQQVCQTVQI*QGGTSSPTLQGVQCKGK*TYLMSTCLSLILLALMCCSQTLTRMSAFQGRHTS*KPKPVGLVPTPASTFNLLALMFVVMGWIKLL*GRHLNWRLRGFSFALERRL*I*QLHTILTSSCPARCGVQHLTL*RY*SPGIQLQKISIGSTLQPQGIEVN***CSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGHYRDGTKSITYCGPRQSFPSSGIFGQSENFVPLILVVTLVAFIHALSLWNSGPSRSCNCHPNPCTCRQQ*WQPSRLFHKSHRGVNSN*ELWAERGPSCYSQRGVGRSKGFRG*P 2009
Range 6: 818 to 1855 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
799.3 bits(1738) | 0.0 | 334/346(97%) | 0/346(0%) | Plus/Plus |
Query 7 VV*ALSVWHGASIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDEAFVAFTAGVPDSPNLTGRYIKPYAPGCAVQGKINILDEYLSVSDTSGFDVLFSDPYQNVSIPREAHFIKTRMCRFGTNICKYFQSFGFDVCSDGVDKVVVGSPFELEVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFDVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*NAFSATCQLG*DHNPINHWFGHWVGSALLKEIKSTIFRRQYSPVPTRRALQGRHEECNLLWP*AVIPKLRNIRSV*KFRTSNIGRDSGRFYTCIISLEFWS**ELQLPSKS 1044 +V*ALSVWHG SIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDEAFVAFTAGVPDSPNLTGRYIKPYAPGCAVQGKINILDEYLSVSDTSGFDVLFSDPYQNVSIPREAHFIKT+ CRFGTN CKY QSFGF+VCSDGVDKVVVGSPFELEVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFDVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*NAFSATCQLG*DHN IN+WFGHWVGSALLKEIKS IFRRQYSPVPTRRALQGRHEE NLLWP*AVIPKLRNIRSV*KFRTSNIGRDSGRFYTC+ISLEFWS**ELQLPSKS Subject 818 IV*ALSVWHGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDEAFVAFTAGVPDSPNLTGRYIKPYAPGCAVQGKINILDEYLSVSDTSGFDVLFSDPYQNVSIPREAHFIKTKTCRFGTNTCKYLQSFGFNVCSDGVDKVVVGSPFELEVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFDVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*NAFSATCQLG*DHNSINYWFGHWVGSALLKEIKSAIFRRQYSPVPTRRALQGRHEEYNLLWP*AVIPKLRNIRSV*KFRTSNIGRDSGRFYTCVISLEFWS**ELQLPSKS 1855
Range 7: 1925 to 2008 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
28.6 bits(56) | 0.0 | 17/28(61%) | 0/28(0%) | Plus/Plus |
Query 1114 *LKIVAQARPLHQQ*GRYWEV*RL*ELA 1197 *L+IV +ARP Q R W V*RL* LA Subject 1925 *LRIVGRARP*LLQSKRCWAV*RL*GLA 2008
Range 8: 935 to 2011 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
754.8 bits(1641) | 0.0 | 322/359(90%) | 0/359(0%) | Minus/Minus |
Query 124 YG*FLKPSNLPIPPSLLMQGPRLGHNFQSK*TLQWP**SNLGDCHYCCLHEXXXXXXXXXXXGPEFQRDNACIKATRVTTNIRGTKFSD*PNIPELGNDCLGPQ*VTLFVPSL*CPPCGNW*ILSPEYGRFDFLKKCRTNPMPKPMVNGVMVLAQLAGC*KGILLHYYQFTSMPCGCNVEPMLIF*SWIPGLQ*RHNVKC*TPHLAGQLEVRIVCNC*IYGLLSKANEDPLNLQFKWRPYNNFIHPITTNIKAKRLKVLADVGTKPTHSGFYEVCLSWNADILVRV*EQHIKARSIRDRQVLIKYVYFPLHCTPWSVGLDVPSCQIWTVWHTCCKGHKSLVFRNKLPY*ATFTATWNTV 1200 +G* LKP + P P L GPR HN Q T +W *++L CHYCCLH QGFGWQLQLLLGPEFQRDNACIKATRVTTNIRGTKFSD*PNIPELGNDCLGPQ*V LFVPSL*CPPCGNW*ILSPEYGRFDFLKKCRTNPMPKP+VNGVMVLAQLAGC*KGILLHYYQFTSMPCGCNVEPMLIF*SWIPGLQ*R+NVKC*TPHLAGQLEVRIVCNC*IY LLSKANE+PLNLQFKWRPYNNFIHPITTNIKAKRLKVLA VGTKPT GFYEVCL WNADILVRV*EQHIKARSIRDRQVLIKYVYFPLHCTPWSVGLDVP CQIWTVWHTCCKGHKSLVFRN+LPY*ATFTATWNTV Subject 935 FG*PLKPLDRPTPL*L*QLGPRSAHNSQLLLTPRWLL*NSLDGCHYCCLHVQGFGWQLQLLLGPEFQRDNACIKATRVTTNIRGTKFSD*PNIPELGNDCLGPQ*VILFVPSL*CPPCGNW*ILSPEYGRFDFLKKCRTNPMPKPIVNGVMVLAQLAGC*KGILLHYYQFTSMPCGCNVEPMLIF*SWIPGLQ*RYNVKC*TPHLAGQLEVRIVCNC*IYSLLSKANENPLNLQFKWRPYNNFIHPITTNIKAKRLKVLAGVGTKPTGFGFYEVCLPWNADILVRV*EQHIKARSIRDRQVLIKYVYFPLHCTPWSVGLDVPPCQIWTVWHTCCKGHKSLVFRNELPY*ATFTATWNTV 2011
Range 9: 818 to 883 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
50.6 bits(104) | 0.0 | 20/22(91%) | 0/22(0%) | Minus/Minus |
Query 7 RQSFD*IIHNTRTMPNT*GLNN 72 RQSFD*+IHNT TMPNT*GLNN Subject 818 RQSFD*VIHNTHTMPNT*GLNN 883
Range 10: 994 to 2088 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
671.9 bits(1460) | 0.0 | 316/365(87%) | 0/365(0%) | Minus/Minus |
Query 183 I*FAGEXXXXXXXXXXXXTIINFFSSMANS*SLQTSQYLPHC*CKGLAWATIFNQNRLSSGPNKATLVTATTVVYMSKDLDGNCNSY*DQNSKEIMHV*KRPESRPILEVRNFQTDRIFLSLGMTA*GHNRLHSSCRPCNALRVGTGEYCLLNMVDLISLRSAEPTQCPNQWLMGLWS*PSWQVAEKAFYCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTSNVEPRTSQGNLKSELCATARSTASFPKQMRTPSTSSSNGDXXXXXXXXXXXXSKPKD*KYLQMLVPNLHILVFMKCASLGMLTFW*GSENSTSKPEVSETDKYSSSMFIFPCTAHPGA*GLMYLPVRFGLSGTPAVKATKA 1277 I*FA + +NLT H T TT+INF + +AN *SL T+Q+L C GLA TI N L G + L+ ATT VYM KDLDGNCNSY*DQNSKEI HV*KRPESRPILEVRNFQTDRIFLSLGMTA*GHNRL+SSCRPCNALRVGTGEYCLLNM DLISLRSAEPTQCPNQ LM LWS*PSWQVAEKAFYCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTSNVEPRTSQGNLKSELCATARSTASFPKQMRTPSTSSSNGDPTTTLSTPSLQT KPKD*+YLQ+LVPNL +LVFMKCASLGMLTFW*GSENSTSKPEVSETDKYSSSMFIFPCTAHPGA*GLMYLPVRFGLSGTPAVKATKA Subject 994 I*FARQFSNLTCHSTVSTTVINFINLLANP*SL*TAQHLFDCSS*GLARPTILNYY*LPGGSYETALMVATTAVYMCKDLDGNCNSY*DQNSKEITHV*KRPESRPILEVRNFQTDRIFLSLGMTA*GHNRLYSSCRPCNALRVGTGEYCLLNMADLISLRSAEPTQCPNQ*LMELWS*PSWQVAEKAFYCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTSNVEPRTSQGNLKSELCATARSTASFPKQMRTPSTSSSNGDPTTTLSTPSLQTLKPKD*RYLQVLVPNLQVLVFMKCASLGMLTFW*GSENSTSKPEVSETDKYSSSMFIFPCTAHPGA*GLMYLPVRFGLSGTPAVKATKA 2088
Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome
Sequence ID: KR054734.1 Length: 8753 Number of Matches: 12
Range 1: 6641 to 7858 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
841.4 bits(1830) | 0.0 | 366/406(90%) | 0/406(0%) | Minus/Minus |
Query 110 F*ALANSSDLSRASNASFDSPGSLPI*LAI*PI*QR*SISSVVWLIPKAFKPPNTSLTVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIATPTRTRIPKR*CMYKSDQSHDQY*RYEIFRLTEYS*AWE*LPRATIGYTLRAVPVMPSVWELVNIVS*IW*I*FP*EVQNQPNAQTNG*WGYGLSPVGRLLKRHFTALLSVYFDALWLQRRTNAYLLKLDPWTSITSQRQMLNPAPRRAT*SQNCVQLLDLRPPFQSK*GPPQPPVQMATLQQLYPPHHYKHQSQKIESTCRCWYQTYTFWFL*SVPLLEC*HSGKGLRTAHQSQKYQRQTSTHQVCLFSLALHTLERRA*CTFLSDLDCLAHLL*RPQKPRLQK*APLLGYFYRYLEHCEQQLE 1327 F LANS LS AS ASFDSPG+ P *LAI Q *SISS WL PKAF+PPNTSLTV ARASLGPQFSI IDSPVAL+KQP LPLLLST ARIWMAIATPTRTRIPKR*CMYKS QSHDQY*RYEIFRLTEYS*AWE*LPRATIGYTLRAVPVMPSVWELVNIVS*IW*I*FP*EVQNQPNAQTN *W YG SPVG LLKRHFTALLS+YFDALWLQRRTNAYLLKLDPWTSITSQRQMLNPA RRAT*SQNCVQLL LRPPFQSK* PPQPPVQMATLQQLYPPHHYKH SQKIE TCRCWYQTY FWFL*SVPLLEC* SGKGLRTAHQSQKYQRQTSTHQVCLFSLALHTLERRA*CTFL DLDCLAHLL*RPQKPRLQK*APLLGY Y YLEHCEQQLE Subject 6641 FWVLANSKALSLASYASFDSPGNFPT*LAIQLSQQL*SISSTFWLTPKAFRPPNTSLTVAARASLGPQFSISIDSPVALMKQP*WLPLLLSTCARIWMAIATPTRTRIPKR*CMYKSHQSHDQY*RYEIFRLTEYS*AWE*LPRATIGYTLRAVPVMPSVWELVNIVS*IW*I*FP*EVQNQPNAQTNS*WSYGFSPVGWLLKRHFTALLSIYFDALWLQRRTNAYLLKLDPWTSITSQRQMLNPALRRAT*SQNCVQLLGLRPPFQSK*EPPQPPVQMATLQQLYPPHHYKH*SQKIEGTCRCWYQTYRFWFL*SVPLLEC*RSGKGLRTAHQSQKYQRQTSTHQVCLFSLALHTLERRA*CTFLLDLDCLAHLL*RPQKPRLQK*APLLGYSYHYLEHCEQQLE 7858
Range 2: 6540 to 6614 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
56.1 bits(116) | 0.0 | 24/25(96%) | 0/25(0%) | Minus/Minus |
Query 9 NSNADKALTKLFIILAPCQTLKA*T 83 NSNADKALTKLFIIL PCQTLKA*T Subject 6540 NSNADKALTKLFIILTPCQTLKA*T 6614
Range 3: 6666 to 7475 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
582.1 bits(1264) | 0.0 | 253/270(94%) | 0/270(0%) | Plus/Plus |
Query 135 R*R*K*PNKGAYF*RRGFCGLYSRCARQSKSDRKVHQALRSRVCSARENKHT**VLVCL*YFWL*CAVLRPLPECQHSKRGTLHKNQNV*VWYQHLQVLSIFWL*CL**WGG*SCCRVAI*TGG*GGPHLLWKGGRRSSSCTQF*LQVALRGAGFNI*RCDVIEVQGSNFRR*ALVLRCSHKASK*TDNNAVKCLFSNLPTGLRP*PH*PLVWALGWFCTS*GNQIYHIQETIFTSSHTEGITGTARRV*PIVALGSHSQAQEYSVSLKI 944 R* *+*PNKGA+F*RRGFCGL+SRCARQSKS+RKVHQALRSRVCSARENKHT**VLVCL*YFWL*CAVLRPLPE QHSKRGTL+KNQN+*VWYQHLQV SIFWL*CL**WGG*SCCRVAI*TGG*GG HLLWKGGRR SSCTQF*LQVALR AGFNI*RCDVIEVQGSNFRR*ALVLRCSHKASK* DNNAVKCLFSN PTGL+P* H* LVWALGWFCTS*GNQIYHIQETIFTSSHTEGITGTARRV*PIVALGSHSQAQEYSVSLKI Subject 6666 R*W*E*PNKGAHF*RRGFCGLHSRCARQSKSNRKVHQALRSRVCSARENKHT**VLVCL*YFWL*CAVLRPLPERQHSKRGTLYKNQNL*VWYQHLQVPSIFWL*CL**WGG*SCCRVAI*TGG*GGSHLLWKGGRRPSSCTQF*LQVALRSAGFNI*RCDVIEVQGSNFRR*ALVLRCSHKASK*IDNNAVKCLFSNQPTGLKP*LH*LLVWALGWFCTS*GNQIYHIQETIFTSSHTEGITGTARRV*PIVALGSHSQAQEYSVSLKI 7475
Range 4: 7518 to 7883 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
230.2 bits(496) | 0.0 | 99/122(81%) | 0/122(0%) | Plus/Plus |
Query 987 MHYLFGILVLVGVAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTVREVLGGLKALGISHTTEEIDYRC*IG*MASQIGKLPGESNEAFEARLKSLELARAQKQLKGQTHP 1352 MHYLFGILVLVGVAIAIQILAHVD+SSG+HQGCFIRATGESILIENCGPSEALA+TV+EVLGGLKALG+S +EIDY C* *MASQ+GKLPGESNEA+EARLK+LELAR QK + P Subject 7518 MHYLFGILVLVGVAIAIQILAHVDSSSGNHQGCFIRATGESILIENCGPSEALAATVKEVLGGLKALGVSQKVDEIDYSC*DS*MASQVGKLPGESNEAYEARLKALELARTQKAPEVSNQP 7883
Range 5: 6540 to 6626 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.0 bits(164) | 0.0 | 28/29(97%) | 0/29(0%) | Plus/Plus |
Query 9 CLGLKCLAWCEYYE*FSQSFVCV*ICWCV 95 CLGLKCLAWCEYYE* SQSFVCV*ICWCV Subject 6540 CLGLKCLAWCEYYE*LSQSFVCV*ICWCV 6626
Range 6: 6539 to 7729 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
825.4 bits(1795) | 0.0 | 354/397(89%) | 0/397(0%) | Plus/Plus |
Query 8 LFRP*VFGMVRVL*II*SKLCLRLNLLVCFVCLNFQLLFTVFQVAVKVA**GSLFLKTRLLWPLQQVCQTVQI*QEGTSSPTLQGVQCKGK*TYLMSTCLSLILLALMCCSQTLTRMSAFQERHTS*KPECVGLVPTSASTFNLLALMFVVMGWIKLL*GRHLNWRLRGSSFALERRP*I*QLHTILTSSCPARCGVQHLTL*RY*SPGIQLQKISIGSTLQPQGIEVN***CSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGHYRDGTKSVTYCGPRQSFPSSGIFGQSENFVPLILVVTLVAFIHALSLWNSGPSRSCNCHPNPCSCRQQ*WQSPRLLY*GHWRVYFD*KLWPKRGPCINSEGGIGRFEGFRN*P 1198 LFRP*VFGMV VL*I *SKLCLRLNLLVCFV LNFQLLFTVFQV V+VA**GS FLKTRLLWP QQVCQTVQI* EGTSSPTLQGVQCKGK*TYLMSTCLSLILLALMCCSQTLTR SAFQERHT *KP+ VGLVPT ASTFNLLALMFVVMGWIKLL*GRHLNWRLRG SFALERRP* *QLHTILTSSCPA+CGVQHLTL*RY*SPGIQLQKISIGSTLQPQGIEVN***CSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGHYRDGTKS+TYCGPRQSFPSSGIFGQSENF+PLILVVTLVAFIHALSLWNSGPSRSCNCHPNPC+CRQQ*WQ RL + H + +*+LW +RGP S+ G+GR +GFR *P Subject 6539 LFRP*VFGMV*VL*IT*SKLCLRLNLLVCFVYLNFQLLFTVFQVVVRVA**GSSFLKTRLLWPSQQVCQTVQI**EGTSSPTLQGVQCKGK*TYLMSTCLSLILLALMCCSQTLTRTSAFQERHTL*KPKPVGLVPTPASTFNLLALMFVVMGWIKLL*GRHLNWRLRGFSFALERRP*T*QLHTILTSSCPAKCGVQHLTL*RY*SPGIQLQKISIGSTLQPQGIEVN***CSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGHYRDGTKSITYCGPRQSFPSSGIFGQSENFIPLILVVTLVAFIHALSLWNSGPSRSCNCHPNPCTCRQQ*WQPSRLFHKSHRGINTN*ELWAERGPSCYSQRGVGRSKGFRG*P 7729
Range 7: 6538 to 7575 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
781.4 bits(1699) | 0.0 | 330/346(95%) | 0/346(0%) | Plus/Plus |
Query 7 VV*ALSVWHGASIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDEAFVAFTAGVPDSPNLTGRYIKPYAPGCAVQGKINILDEYLSVSDTSGFDVLFSDPYQNVSIPREAHFIKTRMCRFGTNICKYFQSFGFDVCSDGVDKVVVGSPFELEVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFDVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*NAFSATCQLG*DHNPINHWFGHWVGSALLKEIKSTIFRRQYSPVPTRRALQGRHEECNLLWP*AVIPKLRNIRSV*KFRTSNIGRDSGRFYTCIISLEFWS**ELQLPSKS 1044 +V*ALSVWHG SIMNNLVKALSAFEFVGVF VLKFPVVVHSVPGSGKSSLIRELISEDEAFVAFTAGVPDSPNL GRYIKPYAPGCAVQGKINILDEYLSVSDTSGFDVLFSDPYQNVSIPREAHFIKT+ CRFGTN CKY QSFGF+VCSDGVDKVVVGSPFELEVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFDVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*NAFSAT QLG*+HN IN+WFGHWVGSALLKEIKSTIFRRQYSPVPTRRALQGRHEE NLLWP*AVIPKLRNIRSV*KF TSNIGRDSG FYTCIISLEFWS**ELQLPSKS Subject 6538 IV*ALSVWHGVSIMNNLVKALSAFEFVGVFRVLKFPVVVHSVPGSGKSSLIRELISEDEAFVAFTAGVPDSPNLIGRYIKPYAPGCAVQGKINILDEYLSVSDTSGFDVLFSDPYQNVSIPREAHFIKTKTCRFGTNTCKYLQSFGFNVCSDGVDKVVVGSPFELEVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFDVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*NAFSATSQLG*NHNSINYWFGHWVGSALLKEIKSTIFRRQYSPVPTRRALQGRHEEYNLLWP*AVIPKLRNIRSV*KFHTSNIGRDSGGFYTCIISLEFWS**ELQLPSKS 7575
Range 8: 7627 to 7728 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
30.4 bits(60) | 0.0 | 18/34(53%) | 0/34(0%) | Plus/Plus |
Query 1096 PLESLF*LKIVAQARPLHQQ*GRYWEV*RL*ELA 1197 P + +*L+IV +ARP Q R W V*RL* LA Subject 7627 PPGNQY*LRIVGRARP*LLQSKRCWAV*RL*GLA 7728
Range 9: 6655 to 7731 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
739.2 bits(1607) | 0.0 | 315/359(88%) | 0/359(0%) | Minus/Minus |
Query 124 YG*FLKPSNLPIPPSLLMQGPRLGHNFQSK*TLQWP**SNLGDCHYCCLHEXXXXXXXXXXXGPEFQRDNACIKATRVTTNIRGTKFSD*PNIPELGNDCLGPQ*VTLFVPSL*CPPCGNW*ILSPEYGRFDFLKKCRTNPMPKPMVNGVMVLAQLAGC*KGILLHYYQFTSMPCGCNVEPMLIF*SWIPGLQ*RHNVKC*TPHLAGQLEVRIVCNC*IYGLLSKANEDPLNLQFKWRPYNNFIHPITTNIKAKRLKVLADVGTKPTHSGFYEVCLSWNADILVRV*EQHIKARSIRDRQVLIKYVYFPLHCTPWSVGLDVPSCQIWTVWHTCCKGHKSLVFRNKLPY*ATFTATWNTV 1200 +G* LKP + P P L GPR HN Q +W *++L CHYCCLH QGFGWQLQLLLGPEFQRDNACIKATRVTTNIRG KFSD*PNIPELGNDCLGPQ*V LFVPSL*CPPCGNW*ILSPEYGRFDFLKKCRTNPMPKP+VNGVMVLAQLAGC*KGILLHYYQFTSMPCGCNVEPMLIF*SWIPGLQ*RHNVKC*TPH AGQLEVRIVCNC*+YGLLSKANE+PLNLQFKWRPYNNFIHPITTNIKAKRLKVLA VGTKPT GFY+VCLSWNAD+LVRV*EQHIKARSIRDRQVLIKYVYFPLHCTPWSVGLDVPS IWTVWHTCC+GHKSLVFRN+LPY*AT T TWNTV Subject 6655 FG*PLKPLDRPTPL*L*QLGPRSAHNSQLVLIPRWLL*NSLDGCHYCCLHVQGFGWQLQLLLGPEFQRDNACIKATRVTTNIRGMKFSD*PNIPELGNDCLGPQ*VILFVPSL*CPPCGNW*ILSPEYGRFDFLKKCRTNPMPKPIVNGVMVLAQLAGC*KGILLHYYQFTSMPCGCNVEPMLIF*SWIPGLQ*RHNVKC*TPHFAGQLEVRIVCNC*VYGLLSKANENPLNLQFKWRPYNNFIHPITTNIKAKRLKVLAGVGTKPTGFGFYKVCLSWNADVLVRV*EQHIKARSIRDRQVLIKYVYFPLHCTPWSVGLDVPSY*IWTVWHTCCEGHKSLVFRNELPY*ATLTTTWNTV 7731
Range 10: 6538 to 6606 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.8 bits(109) | 0.0 | 21/23(91%) | 0/23(0%) | Minus/Minus |
Query 7 RRQSFD*IIHNTRTMPNT*GLNN 75 RRQSFD*+IHNT TMPNT*GLNN Subject 6538 RRQSFD*VIHNTHTMPNT*GLNN 6606
Range 11: 6714 to 7808 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
656.3 bits(1426) | 0.0 | 310/365(85%) | 0/365(0%) | Minus/Minus |
Query 183 I*FAGEXXXXXXXXXXXXTIINFFSSMANS*SLQTSQYLPHC*CKGLAWATIFNQNRLSSGPNKATLVTATTVVYMSKDLDGNCNSY*DQNSKEIMHV*KRPESRPILEVRNFQTDRIFLSLGMTA*GHNRLHSSCRPCNALRVGTGEYCLLNMVDLISLRSAEPTQCPNQWLMGLWS*PSWQVAEKAFYCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTSNVEPRTSQGNLKSELCATARSTASFPKQMRTPSTSSSNGDXXXXXXXXXXXXSKPKD*KYLQMLVPNLHILVFMKCASLGMLTFW*GSENSTSKPEVSETDKYSSSMFIFPCTAHPGA*GLMYLPVRFGLSGTPAVKATKA 1277 I*FA + +NLT H T TT+INF + +AN *SL T+Q+L C GLA TI N G + L+ ATT VYM KDLDGNCNSY*DQNSKEIMHV*K PESRPILEV NFQTDRIFLSLGMTA*GHNRL+SSCRPCNALRVGTGEYCLLNMVDLISLRSAEPTQCPNQ LM LW *PSW VAEKAFYCIII+LLRCLVAAT*NQCLSSEVGSLDFNNVTTSNVEPRTSQGNLKSELCATARSTASFPKQMRTPSTSSSNGDPTTTLSTPSLQT KPKD*+YLQ+LVPNL +LVF+KCASLGMLTFW*GSENSTSKPEVSETDKYSSSMFIFPCTAHPGA*GLMYLP+RFGLSGTPAVKATKA Subject 6714 I*FARQFSNLTCHSTVSTTVINFINLLANP*SL*TAQHLFDCSS*GLARPTILN*Y*FPGGSYETALMVATTAVYMCKDLDGNCNSY*DQNSKEIMHV*KPPESRPILEV*NFQTDRIFLSLGMTA*GHNRLYSSCRPCNALRVGTGEYCLLNMVDLISLRSAEPTQCPNQ*LMELWF*PSWLVAEKAFYCIIINLLRCLVAAT*NQCLSSEVGSLDFNNVTTSNVEPRTSQGNLKSELCATARSTASFPKQMRTPSTSSSNGDPTTTLSTPSLQTLKPKD*RYLQVLVPNLQVLVFIKCASLGMLTFW*GSENSTSKPEVSETDKYSSSMFIFPCTAHPGA*GLMYLPIRFGLSGTPAVKATKA 7808
Grapevine rupestris stem pitting associated virus isolate SK704 A, complete genome
Sequence ID: KX274274.1 Length: 8725 Number of Matches: 13
Range 1: 6536 to 7729 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
754.8 bits(1641) | 0.0 | 328/398(82%) | 0/398(0%) | Plus/Plus |
Query 5 ALFRP*VFGMVRVL*II*SKLCLRLNLLVCFVCLNFQLLFTVFQVAVKVA**GSLFLKTRLLWPLQQVCQTVQI*QEGTSSPTLQGVQCKGK*TYLMSTCLSLILLALMCCSQTLTRMSAFQERHTS*KPECVGLVPTSASTFNLLALMFVVMGWIKLL*GRHLNWRLRGSSFALERRP*I*QLHTILTSSCPARCGVQHLTL*RY*SPGIQLQKISIGSTLQPQGIEVN***CSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGHYRDGTKSVTYCGPRQSFPSSGIFGQSENFVPLILVVTLVAFIHALSLWNSGPSRSCNCHPNPCSCRQQ*WQSPRLLY*GHWRVYFD*KLWPKRGPCINSEGGIGRFEGFRN*P 1198 +LFRP*VFG+V VL*I *S+LC LNLLVC CLNFQLLF VFQVAV+VA**GS FLKT L W LQQVCQTVQI*QEGTSSPTLQGVQCKG+*TYLMSTCLSLI + LMCCSQTLTR SAFQ RHTS*+P+ GLV T A T NLLA +V+ W +LL*GRHLNW LR SFALERRP*I*QL TI TSSCP RCGVQHLTL*RY*S G QLQKISIGSTLQ QGIE N***CSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGHYRDGTKS+TYCGPRQSFPSSGIFGQSENFVPLILVVTLVAFIHALSLWNSGP RSCNCHPNPC+CRQQ*WQ RL + H V D*+LW KRGP +S G+GR EGFR *P Subject 6536 SLFRP*VFGVV*VL*IT*SRLCQHLNLLVCSACLNFQLLFIVFQVAVRVA**GSSFLKTSLSWLLQQVCQTVQI*QEGTSSPTLQGVQCKGR*TYLMSTCLSLIFMVLMCCSQTLTRTSAFQGRHTS*RPKLAGLVLTPAGTSNLLASKSIVIEWTQLL*GRHLNWMLREFSFALERRP*I*QLRTIPTSSCPVRCGVQHLTL*RY*SLGTQLQKISIGSTLQQQGIEAN***CSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGHYRDGTKSITYCGPRQSFPSSGIFGQSENFVPLILVVTLVAFIHALSLWNSGPGRSCNCHPNPCTCRQQ*WQPSRLFHKSHRGVNTD*ELWAKRGPSCHS*RGVGRSEGFRG*P 7729
Range 2: 6641 to 7858 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
698.9 bits(1519) | 0.0 | 322/406(79%) | 0/406(0%) | Minus/Minus |
Query 110 F*ALANSSDLSRASNASFDSPGSLPI*LAI*PI*QR*SISSVVWLIPKAFKPPNTSLTVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIATPTRTRIPKR*CMYKSDQSHDQY*RYEIFRLTEYS*AWE*LPRATIGYTLRAVPVMPSVWELVNIVS*IW*I*FP*EVQNQPNAQTNG*WGYGLSPVGRLLKRHFTALLSVYFDALWLQRRTNAYLLKLDPWTSITSQRQMLNPAPRRAT*SQNCVQLLDLRPPFQSK*GPPQPPVQMATLQQLYPPHHYKHQSQKIESTCRCWYQTYTFWFL*SVPLLEC*HSGKGLRTAHQSQKYQRQTSTHQVCLFSLALHTLERRA*CTFLSDLDCLAHLL*RPQKPRLQK*APLLGYFYRYLEHCEQQLE 1327 F*ALANS LS AS AS DSPG+ P *LAI* Q *SISS WL PKAF+PPNTSLTV ARASLGPQFSI IDSPVAL+KQP LPLLLST ARIWMAIATPTRTRIPKR*CMY+SDQS+DQY*R EIF LT+Y * WE*LPR TIGYTL AVPVMP VW+LVNIV+*IW I* EV NQ NAQ NG*W Y LSPVGRLL+RH TALLSV FDAL LQRRTNAYLLKL P TSITSQR MLNPAP RAT*S+NC QLLDLRPPFQSK* PQ PVQMATL QL P +HY+ +SQKI TCRC +QT FW L*SVP LE * SGKGLRTAHQ+ +YQRQTSTHQVCL SLALHTLE RA*CTFL DLDCLAHLL*+P+K RLQK*APLLGY YRYLEH EQQLE Subject 6641 F*ALANSKALSLASYASLDSPGNFPT*LAI*LFQQL*SISSTFWLTPKAFRPPNTSLTVAARASLGPQFSISIDSPVALMKQP*WLPLLLSTCARIWMAIATPTRTRIPKR*CMYESDQSYDQY*RNEIFGLTKYP*TWE*LPRTTIGYTLCAVPVMPPVWKLVNIVT*IWQI*LSQEV*NQSNAQANG*WSYSLSPVGRLLERHLTALLSVCFDALLLQRRTNAYLLKLGP*TSITSQR*MLNPAPHRAT*SRNCAQLLDLRPPFQSK*ELPQHPVQMATL*QLRPLYHYRFRSQKIGGTCRC*HQTCKFWSL*SVPPLER*CSGKGLRTAHQNHEYQRQTSTHQVCLSSLALHTLESRA*CTFLLDLDCLAHLL*KPRKTRLQK*APLLGYSYRYLEHYEQQLE 7858
Range 3: 6540 to 6614 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
50.6 bits(104) | 0.0 | 23/25(92%) | 0/25(0%) | Minus/Minus |
Query 9 NSNADKALTKLFIILAPCQTLKA*T 83 NSNADKALTKLFIIL P QTLKA*T Subject 6540 NSNADKALTKLFIILTPRQTLKA*T 6614
Range 4: 6538 to 7575 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
710.8 bits(1545) | 0.0 | 294/346(85%) | 0/346(0%) | Plus/Plus |
Query 7 VV*ALSVWHGASIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDEAFVAFTAGVPDSPNLTGRYIKPYAPGCAVQGKINILDEYLSVSDTSGFDVLFSDPYQNVSIPREAHFIKTRMCRFGTNICKYFQSFGFDVCSDGVDKVVVGSPFELEVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFDVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*NAFSATCQLG*DHNPINHWFGHWVGSALLKEIKSTIFRRQYSPVPTRRALQGRHEECNLLWP*AVIPKLRNIRSV*KFRTSNIGRDSGRFYTCIISLEFWS**ELQLPSKS 1044 +V*ALSVW G SIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDE+FVAFTAGVPDSPNLTGRYIKPY+PGCAVQGKINILDEYLSVSD GFDVLFSDPYQN+S+PREAHFIKT+ CRFG N C+Y QSFGF++ SD VD VV+GSPFEL+VEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTF+VVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*+AF ATCQLG*D+N INHW GHW+GS LL+++K IFR QYSPV TR ALQGRH+E NLLW *A+IPK R+I SV KFR+ N GR+SGRF+TCIISLEFWS *ELQLPSKS Subject 6538 IV*ALSVWRGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNISVPREAHFIKTKTCRFGANTCRYLQSFGFEIYSDRVDAVVIGSPFELDVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFNVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*DAFPATCQLG*DYNSINHWLGHWIGSTLLEKVKFAIFR*QYSPVSTRGALQGRHKEYNLLWS*AIIPKFRDIWSVRKFRSFNTGRNSGRFHTCIISLEFWSW*ELQLPSKS 7575
Range 5: 7627 to 7728 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
34.1 bits(68) | 0.0 | 20/34(59%) | 0/34(0%) | Plus/Plus |
Query 1096 PLESLF*LKIVAQARPLHQQ*GRYWEV*RL*ELA 1197 P S +*L+IV QARP Q R W V*RL* LA Subject 7627 PPGSQY*LRIVGQARP*LPQLKRCWAV*RL*GLA 7728
Range 6: 6666 to 7475 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
455.6 bits(988) | 0.0 | 214/270(79%) | 0/270(0%) | Plus/Plus |
Query 135 R*R*K*PNKGAYF*RRGFCGLYSRCARQSKSDRKVHQALRSRVCSARENKHT**VLVCL*YFWL*CAVLRPLPECQHSKRGTLHKNQNV*VWYQHLQVLSIFWL*CL**WGG*SCCRVAI*TGG*GGPHLLWKGGRRSSSCTQF*LQVALRGAGFNI*RCDVIEVQGSNFRR*ALVLRCSHKASK*TDNNAVKCLFSNLPTGLRP*PH*PLVWALGWFCTS*GNQIYHIQETIFTSSHTEGITGTARRV*PIVALGSHSQAQEYSVSLKI 944 R*R*+*PNKGA+F*RR F G YSRCARQSKS+RKVHQAL SRVCSARE+KHT**VLVCL*Y W *CAVLRPLPE Q SK GTLHK+QN+ VW HLQV IFWL L** G SC RVAI*TG *G HLLWKGGRRSSSC QF LQVAL GAGFNI*RCDVIEV G NFRR*ALVLRCS+KASK TDNNAV+CL SNLPTGLR * H*PL WAL WF TS* +QI HIQ TIFTS HT GITGTA+RV*PIV LG+HSQ Q Y VS KI Subject 6666 R*R*E*PNKGAHF*RRVFRGFYSRCARQSKSNRKVHQALLSRVCSAREDKHT**VLVCL*YSWF*CAVLRPLPEHQRSKGGTLHKDQNLQVWC*HLQVPPIFWLRNL***SGRSCYRVAI*TGC*GSSHLLWKGGRRSSSCAQFRLQVAL*GAGFNI*RCDVIEV*GPNFRR*ALVLRCSNKASKQTDNNAVRCLSSNLPTGLRL*LH*PLAWALDWFYTS*ESQICHIQVTIFTSFHTGGITGTAQRV*PIVVLGNHSQVQGYLVSPKI 7475
Range 7: 7518 to 7883 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
232.0 bits(500) | 0.0 | 100/122(82%) | 0/122(0%) | Plus/Plus |
Query 987 MHYLFGILVLVGVAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTVREVLGGLKALGISHTTEEIDYRC*IG*MASQIGKLPGESNEAFEARLKSLELARAQKQLKGQTHP 1352 MHYLFGILVLVGVAIAIQILAHVD+SSG+HQGCFIRATGESILIENCGPSEALA+TV+EVLGGLKALG+S +EIDY C* *MASQ+GKLPGESNEA+EARLK+LELARAQK + P Subject 7518 MHYLFGILVLVGVAIAIQILAHVDSSSGNHQGCFIRATGESILIENCGPSEALAATVKEVLGGLKALGVSQKVDEIDYSC*KS*MASQVGKLPGESNEAYEARLKALELARAQKAPEVSNQP 7883
Range 8: 6540 to 6629 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
73.0 bits(153) | 0.0 | 26/30(87%) | 0/30(0%) | Plus/Plus |
Query 9 CLGLKCLAWCEYYE*FSQSFVCV*ICWCVL 98 CLGLKCLAWCEYYE* SQ FV +*ICWCVL Subject 6540 CLGLKCLAWCEYYE*LSQGFVSI*ICWCVL 6629
Range 9: 6655 to 7731 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
682.0 bits(1482) | 0.0 | 289/359(81%) | 0/359(0%) | Minus/Minus |
Query 124 YG*FLKPSNLPIPPSLLMQGPRLGHNFQSK*TLQWP**SNLGDCHYCCLHEXXXXXXXXXXXGPEFQRDNACIKATRVTTNIRGTKFSD*PNIPELGNDCLGPQ*VTLFVPSL*CPPCGNW*ILSPEYGRFDFLKKCRTNPMPKPMVNGVMVLAQLAGC*KGILLHYYQFTSMPCGCNVEPMLIF*SWIPGLQ*RHNVKC*TPHLAGQLEVRIVCNC*IYGLLSKANEDPLNLQFKWRPYNNFIHPITTNIKAKRLKVLADVGTKPTHSGFYEVCLSWNADILVRV*EQHIKARSIRDRQVLIKYVYFPLHCTPWSVGLDVPSCQIWTVWHTCCKGHKSLVFRNKLPY*ATFTATWNTV 1200 +G* LKPS+ P P L GPRL HN QS T +W *++L CHYCCLH QGFGWQLQLL GPEFQRDNAC+KATRVTT+I+GTKFSD*PNIPELGNDCLGPQ*V LFVPSL*CPPCGNW*ILSPEYG+FDFLKKCRTNPMPKPMVNGV+VLAQLAGC KGILLHYYQF SMPC CNVEPMLIF*SW+P LQ*RHNVKC*TPHL GQLEV IV NC*IYGLLSKANE+ LN+QFKWRPYNN +H IT + +AKRL+V A V TKP G YEVCL WNAD+LVRV*EQHIK +IRDRQVLIKYVY PLHCTPW VGLDVPSC IWTVWHTCCK H+ LVFRN+LPY*AT TATWNT+ Subject 6655 FG*PLKPSDRPTPL*LWQLGPRLAHNSQSVLTPRWLL*NSLDGCHYCCLHVQGFGWQLQLLPGPEFQRDNACMKATRVTTSIKGTKFSD*PNIPELGNDCLGPQ*VILFVPSL*CPPCGNW*ILSPEYGKFDFLKKCRTNPMPKPMVNGVIVLAQLAGCWKGILLHYYQFASMPCCCNVEPMLIF*SWVPRLQ*RHNVKC*TPHLTGQLEVGIVRNC*IYGLLSKANENSLNIQFKWRPYNNCVHSITIDFEAKRLEVPAGVSTKPASFGLYEVCLPWNADVLVRV*EQHIKTMNIRDRQVLIKYVYLPLHCTPWRVGLDVPSC*IWTVWHTCCKSHERLVFRNELPY*ATLTATWNTM 7731
Range 10: 6539 to 6592 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
43.2 bits(88) | 0.0 | 17/18(94%) | 0/18(0%) | Minus/Minus |
Query 8 *LNYS*YSHHAKHLRPKQ 61 *L+YS*YSHHAKHLRPKQ Subject 6539 *LSYS*YSHHAKHLRPKQ 6592
Range 11: 7017 to 7829 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
434.1 bits(941) | 0.0 | 202/271(75%) | 0/271(0%) | Minus/Minus |
Query 486 KPGFKRLI*FAGEXXXXXXXXXXXXTIINFFSSMANS*SLQTSQYLPHC*CKGLAWATIFNQNRLSSGPNKATLVTATTVVYMSKDLDGNCNSY*DQNSKEIMHV*KRPESRPILEVRNFQTDRIFLSLGMTA*GHNRLHSSCRPCNALRVGTGEYCLLNMVDLISLRSAEPTQCPNQWLMGLWS*PSWQVAEKAFYCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTSNVEPRTSQGNLKSELCATARSTASFPKQMRTPSTSSSNGD 1298 KPGF I A +L+ LT HLT TT+INF + +AN *SLQT+Q+L +C GLAW TI NQ L G + L+ ATT VYM KDLDGNCNSY DQNSKEIMHV*KRPE RP+L+ RNF+TD+I L+LGM A* HNRL+S CRPCNA RV TGEYC LNM +L RS EP QCP+QWLM L S*PSWQVA KA YCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTT NVEPRTSQGNLKSELCATARSTASFPKQMRTPSTSSSNGD Subject 7017 KPGFICFIRLARQLSYLTCHLTLSTTVINFINLLANP*SLQTAQHLFNCGS*GLAWPTILNQY*LPGGSYETALMVATTAVYMCKDLDGNCNSYQDQNSKEIMHV*KRPELRPVLKERNFRTDQISLNLGMIA*DHNRLYSLCRPCNAPRVETGEYCHLNMANLTFSRSVEPIQCPSQWLMEL*S*PSWQVAGKASYCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTLNVEPRTSQGNLKSELCATARSTASFPKQMRTPSTSSSNGD 7829
Range 12: 6717 to 6977 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
184.4 bits(396) | 0.0 | 76/87(87%) | 0/87(0%) | Minus/Minus |
Query 186 KPKD*KYLQMLVPNLHILVFMKCASLGMLTFW*GSENSTSKPEVSETDKYSSSMFIFPCTAHPGA*GLMYLPVRFGLSGTPAVKATK 446 KPKD +YLQ+L PNL +LVFMKCASLG L FW*GSENSTSKP +SETDKYSSSMFIFPCTAHPG *GLMYLPVRFGLSGTPAVKATK Subject 6717 KPKDWRYLQVLAPNLQVLVFMKCASLGTLMFW*GSENSTSKP*ISETDKYSSSMFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATK 6977
Nucleotide Sequence (658 letters)
Query ID: | ds2016-132_4 |
Query definition: | No definition line |
Query length: | 951 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
520.2 | 2736.0 | 31% | 1.046e-145 | 87% | KX925556.1 | |
519.3 | 2226.4 | 33% | 1.973e-145 | 68% | HE591388.1 | |
519.3 | 2689.7 | 31% | 1.973e-145 | 86% | KX274276.1 | |
517.9 | 2208.1 | 31% | 5.117e-145 | 67% | AF057136.1 | |
517.9 | 2215.9 | 33% | 5.117e-145 | 67% | AF026278.1 |
Alignments
Grapevine rupestris stem pitting associated virus isolate TEMP BR replicase, 24.4 kDa protein, 12.8 kDa protein, 8.4 kDa protein, and 28 kDa protein genes, complete cds
Sequence ID: KX925556.1 Length: 8700 Number of Matches: 6
Range 1: 4016 to 4672 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
520.2 bits(1129) | 0.0 | 217/219(99%) | 0/219(0%) | Minus/Plus |
Query 2 TGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFL 658 TGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDD CKVAKAGKSKKEGWDVVTFEVFLRKVS LKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFL Subject 4016 TGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKVSSLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFL 4672
Range 2: 4018 to 4671 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
458.8 bits(995) | 0.0 | 210/218(96%) | 0/218(0%) | Plus/Minus |
Query 3 RKSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTKRLLSMLYLYVFPXXXXXXXXXXAPKIARSFCESYVLWHGSPASEMKASLRMTSKHKSIYPGGNN*TSSKITQ*PAFKPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLGFISAVDIPESQGFASLNFSSLMTP 656 RKSCILWKIA*SAKAAVIEPFLK*HG+LDSNIGFTKRLLSMLYLYVFPSSSLS+SLCSAP+IARSFCESYVLWHGSPASEMKASLRMTSKH+SIYPGGN+*TSSKITQ*PAFK ETFLRKTSKVTTSHPSFFDLPALATLQ SSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLG ISAVDIPESQGFASLNFSSLMTP Subject 4018 RKSCILWKIA*SAKAAVIEPFLK*HGNLDSNIGFTKRLLSMLYLYVFPSSSLSISLCSAPRIARSFCESYVLWHGSPASEMKASLRMTSKHRSIYPGGNS*TSSKITQ*PAFKLETFLRKTSKVTTSHPSFFDLPALATLQLSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLGLISAVDIPESQGFASLNFSSLMTP 4671
Range 3: 4018 to 4671 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
457.0 bits(991) | 0.0 | 192/218(88%) | 0/218(0%) | Minus/Plus |
Query 3 WCHK**KVQ*CKTLAFWYINCGYKAKRANCRAWHIWGWKEFLV*EFHEEI*GKICNFCFP*TSLGKFNQK*S*NG*WLQSCQSRQIKEGRVGCSDL*SFP*KSFWFEGWSLCDFR*GSVVSPWIYRFVFTCHTQ*CFHFTCW*SMPEHI*FTEGSSNFGS*AE*HTQTA*RKDI*VQHRKQTFCEPNV*I*TTMSLQKRFNDCSLC*LCNLPQYA*LP 656 WCHK**KVQ*CKTLAFWYINC Y AKRANCRAWHIWGWKEFLV*EFHEE+* KICNFCFP TSL KFNQK*S*NG* LQSCQSRQIKEGRVGC D * FP*KSF FEG SLCDFR*GS VSPWIYR +FTCHTQ*CFH TCW*SMPEHI*FT+GS N GS*AE*+TQTA*RKD+ VQHRKQ FCEPNV*I* TMSLQKRFNDC LC*LCNLP YA*LP Subject 4018 WCHK**KVQ*CKTLAFWYINCRY*AKRANCRAWHIWGWKEFLV*EFHEEV*RKICNFCFPETSLSKFNQK*S*NG**LQSCQSRQIKEGRVGCGDF*GFP*KSF*FEGRSLCDFR*GSAVSPWIYRSMFTCHTQ*CFHLTCW*SMPEHI*FTKGSCNSGS*AE*YTQTA*RKDVQVQHRKQAFCEPNV*I*ITMSLQKRFNDCCLC*LCNLP*YA*LP 4671
Range 4: 4016 to 4672 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
446.9 bits(969) | 0.0 | 201/219(92%) | 0/219(0%) | Plus/Minus |
Query 2 EEVMHIVEDCIISKGCSH*TFFEVTW*SRFKHWVHKTSAFYVVPICLSFKQSEYVTLLSSQNCSXXXXXXXXXXWITSK*NESITAYDK*TQIDISRGKQLNLIENHTMTSLQTRNFSKENFKGHYIPPFLL*FACFGNFAAIIHFKIIFD*ICQGSSRGNKSYKFSLRSLHETLIQETLSSPKCAKHDS*LSWLYIRS*YTRKPGFCITELFITYDTS 658 EEVMHI+EDCIISKG SH*TFFEVTW*SRFKHWVHKT AFYVVP+ LSFKQSEY+TLLSSQNC+ILL*IICALAWITSK*+ESITAYDK*T IDISRGKQLNLIENHTMT LQTRNFSKEN K H+IPPFLL*FACFGNFAAIIHFKIIFD*IC GSSRGNKSYKFS R LHETLIQETLSSPKCAKHDS*LSWL I S*YTRKPGFCITELFITYDTS Subject 4016 EEVMHIMEDCIISKGSSH*TFFEVTW*SRFKHWVHKTPAFYVVPVRLSFKQSEYITLLSSQNCTILL*IICALAWITSK*DESITAYDK*T*IDISRGKQLNLIENHTMTGLQTRNFSKENLKSHHIPPFLL*FACFGNFAAIIHFKIIFD*IC*GSSRGNKSYKFSFRPLHETLIQETLSSPKCAKHDS*LSWLNICS*YTRKPGFCITELFITYDTS 4672
Range 5: 4017 to 4673 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
431.3 bits(935) | 0.0 | 198/219(90%) | 0/219(0%) | Minus/Plus |
Query 1 LVS*VMKSSVMQNPGFLVYQLRI*SQES*LSCLAHLGLERVSCIRVS*RDLRENL*LLFPLDEPWQIQSKMILKWMMAAKLPKQANQRRKGGM**PLKFSLEKFLV*RLVIV*FSMRFSCFPLDISICVYLSYAVMLSFHLLVIHARAHMIHRRIEQFWELSRVTYSDCLKERHIGTT*KADVL*TQCLNLDYHVTSKKVQ*LQPLLIMQSSTICMTSS 657 LVS*VMKSSVMQNPGFLVYQL+I SQES*LSCLAHLGLERVSCIRVS*R L+ENL*LLFP DEP QIQSKMILKWM+AAKLPKQANQRRKGGM * L+FSLEKFLV*R VIV*FSMRFSCFPLDISI VYLSYAVMLS HLLVIHARAHMIH+RI QFWELSRV YSDCLKER GTT*KA VL*TQCLNLDYHVTSKKVQ*L PLLIMQSS ICMTSS Subject 4017 LVS*VMKSSVMQNPGFLVYQLQILSQES*LSCLAHLGLERVSCIRVS*RGLKENL*LLFPRDEP*QIQSKMILKWMIAAKLPKQANQRRKGGMW*LLRFSLEKFLV*RPVIV*FSMRFSCFPLDISIYVYLSYAVMLSSHLLVIHARAHMIHKRIVQFWELSRVIYSDCLKERRTGTT*KAGVL*TQCLNLDYHVTSKKVQ*LLPLLIMQSSIICMTSS 4673
Range 6: 4053 to 4673 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
421.7 bits(914) | 0.0 | 181/207(87%) | 0/207(0%) | Plus/Minus |
Query 1 GGSHAYCGRLHNQQRLQSLNLF*SDMVV*IQTLGSQNVCFLCCTYMSFLQAV*VCHSAQLPKLLDPSVNHMCSGMDHQQVK*KHHCV*QVNTNRYIQGETTEPHRKSHNDQPSNQKLF*GKLQRSLHPTLPSLICLLWQLCSHHPFQDHF*LNLPRLV*GKQKLQIFPQISS*NSYTRNSFQPQMCQARQLALLALYPQLIYQKARV 621 GGSHAY GRLHNQQR QSLNLF*SDMV+*IQTLGSQN CFLCCT SFLQAV*V HSAQLP+L DP VNHMCSGMDHQQV+*KHHCV*QVN +RYIQGET EPHRKSHND+PSN KLF*GK Q+S HPTLPSLICLLWQLCS+HPFQDHF*LNL RLV GKQKLQIF Q SS*NSYTRNSFQPQMCQARQLALLA Y QLIYQKARV Subject 4053 GGSHAYYGRLHNQQRQQSLNLF*SDMVI*IQTLGSQNACFLCCTCTSFLQAV*VYHSAQLPELHDPFVNHMCSGMDHQQVR*KHHCV*QVNIDRYIQGETAEPHRKSHNDRPSN*KLF*GKPQKSPHPTLPSLICLLWQLCSYHPFQDHF*LNLLRLVSGKQKLQIFLQTSS*NSYTRNSFQPQMCQARQLALLA*YLQLIYQKARV 4673
Grapevine rupestris stem pitting associated virus complete genome, isolate PG, genomic RNA
Sequence ID: HE591388.1 Length: 8725 Number of Matches: 6
Range 1: 4027 to 4683 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
519.3 bits(1127) | 0.0 | 215/219(98%) | 0/219(0%) | Minus/Plus |
Query 2 TGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFL 658 TGVISDEKFSDAKPWLSGIST DIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDD CKVAKAGKSKKEGWDVVTFEVFLRKV+GLKAGHCVIFDEVQLFPPGYIDLCLL+IRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFL Subject 4027 TGVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQLFPPGYIDLCLLIIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFL 4683
Range 2: 4029 to 4682 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
428.1 bits(928) | 0.0 | 199/218(91%) | 0/218(0%) | Plus/Minus |
Query 3 RKSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTKRLLSMLYLYVFPXXXXXXXXXXAPKIARSFCESYVLWHGSPASEMKASLRMTSKHKSIYPGGNN*TSSKITQ*PAFKPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLGFISAVDIPESQGFASLNFSSLMTP 656 RKSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFT LLSMLYLYV PSSSLSMSLCSAPKIARSFCESYVL HGSPASEMKASLR+ SKH+S+YPGGNN TSSKITQ PAF P TFLRKTSKVTTSHPSFFDLPALATLQ SSISRSFLIEFAKARLGETKVTN PSDLF+KLLYKKLFPAPNVPSTTV+SLG IS VDIPESQGFASLNFSSL+TP Subject 4029 RKSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTNLLLSMLYLYVLPSSSLSMSLCSAPKIARSFCESYVL*HGSPASEMKASLRIMSKHRSMYPGGNNWTSSKITQWPAFNPATFLRKTSKVTTSHPSFFDLPALATLQLSSISRSFLIEFAKARLGETKVTNLPSDLFIKLLYKKLFPAPNVPSTTVNSLGLISVVDIPESQGFASLNFSSLITP 4682
Range 3: 4027 to 4683 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
340.1 bits(736) | 0.0 | 153/219(70%) | 0/219(0%) | Plus/Minus |
Query 2 EEVMHIVEDCIISKGCSH*TFFEVTW*SRFKHWVHKTSAFYVVPICLSFKQSEYVTLLSSQNCSXXXXXXXXXXWITSK*NESITAYDK*TQIDISRGKQLNLIENHTMTSLQTRNFSKENFKGHYIPPFLL*FACFGNFAAIIHFKIIFD*ICQGSSRGNKSYKFSLRSLHETLIQETLSSPKCAKHDS*LSWLYIRS*YTRKPGFCITELFITYDTS 658 E+VMHI+ED IIS+ SH FEVTW*S F+HWVHK AFYV+PI L+ KQS+YVTLLS+QNC ILL IICAL WIT K*NESIT Y++ ID+SR KQL+LI+NHT+ SLQ+ NFS+EN K +YIPPFLL* CFGNFAAIIHFKIIFD*IC +S NK Y+F+LR H+TL+QETL SPKC KHDS WL IRS YTRKP FCITEL ITY+ S Subject 4027 EKVMHIMEDRIISESGSHRALFEVTW*S*FEHWVHKPPAFYVIPIRLALKQSKYVTLLSAQNCPILLRIICALTWITGK*NESITTYNEQA*IDVSRRKQLDLIKNHTVASLQSCNFSEENLKSYYIPPFLL*LTCFGNFAAIIHFKIIFD*IC*STSGRNKGYEFTLRPFHKTLVQETLPSPKCTKHDSQFPWLNIRSGYTRKPRFCITELLITYNAS 4683
Range 4: 4029 to 4679 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
325.9 bits(705) | 0.0 | 148/217(68%) | 0/217(0%) | Minus/Plus |
Query 6 WCHK**KVQ*CKTLAFWYINCGYKAKRANCRAWHIWGWKEFLV*EFHEEI*GKICNFCFP*TSLGKFNQK*S*NG*WLQSCQSRQIKEGRVGCSDL*SFP*KSFWFEGWSLCDFR*GSVVSPWIYRFVFTCHTQ*CFHFTCW*SMPEHI*FTEGSSNFGS*AE*HTQTA*RKDI*VQHRKQTFCEPNV*I*TTMSLQKRFNDCSLC*LCNLPQYA*L 656 W +K**+VQ*CKTLAFWYI+ GY AK +CRAW+IWGW+EFLV EF+E++*G I N CF T KFNQK*S*NG* LQSCQSR +KEGRVGCS+ * FP KS EGW LCDF *G VVS WI+R + +T *CFHFTC *SM +HI*F +GS NFG *AE*HT TA* +D+*V HRKQ CEPNV I TTMSLQK +DC *LC+LP YA*L Subject 4029 WRYK**EVQ*CKTLAFWYIHYGY*AKGIDCRAWYIWGWEEFLVQEFYEKV*G*IRNLCFSQTCFSKFNQK*S*NG**LQSCQSR*VKEGRVGCSNF*GFPQKSCRIEGWPLCDF**GPVVSSWIHRSMLAHYT**CFHFTCR*SMSKHI*FAKGSGNFGR*AE*HT*TA*GQDV*V*HRKQEVCEPNVRIKTTMSLQKGLDDCRFR*LCDLP*YA*L 4679
Range 5: 4064 to 4684 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
309.4 bits(669) | 0.0 | 142/207(69%) | 0/207(0%) | Plus/Minus |
Query 1 GGSHAYCGRLHNQQRLQSLNLF*SDMVV*IQTLGSQNVCFLCCTYMSFLQAV*VCHSAQLPKLLDPSVNHMCSGMDHQQVK*KHHCV*QVNTNRYIQGETTEPHRKSHNDQPSNQKLF*GKLQRSLHPTLPSLICLLWQLCSHHPFQDHF*LNLPRLV*GKQKLQIFPQISS*NSYTRNSFQPQMCQARQLALLALYPQLIYQKARV 621 G SHAY GR HNQ++ QS + F*SDMVV I+TLGSQ CFLC TY S QAV*VCHSAQ PKL DP NHMC MDH+QVK*KHH V* + +R IQ ETT PH+KSH+ QPS +LF*GK Q+ LHPTLPSL LLWQLCS+HPFQDHF*LNL + V KQ+L+I+PQ S*NS TRNS QPQM QARQ LA YP IYQKA+V Subject 4064 GESHAYYGRSHNQRKRQSSSPF*SDMVVLIRTLGSQTSCFLCYTYTSCPQAV*VCHSAQRPKLPDPFANHMCFDMDHRQVK*KHHYV**ASIDRCIQEETTGPHQKSHSGQPSILQLF*GKPQKLLHPTLPSLTYLLWQLCSYHPFQDHF*LNLLKHVWEKQRLRIYPQTFS*NSCTRNSSQPQMYQARQSIPLA*YP*WIYQKAKV 4684
Range 6: 4028 to 4684 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
303.5 bits(656) | 0.0 | 151/219(69%) | 0/219(0%) | Minus/Plus |
Query 1 LVS*VMKSSVMQNPGFLVYQLRI*SQES*LSCLAHLGLERVSCIRVS*RDLRENL*LLFPLDEPWQIQSKMILKWMMAAKLPKQANQRRKGGM**PLKFSLEKFLV*RLVIV*FSMRFSCFPLDISICVYLSYAVMLSFHLLVIHARAHMIHRRIEQFWELSRVTYSDCLKERHIGTT*KADVL*TQCLNLDYHVTSKKVQ*LQPLLIMQSSTICMTSS 657 L *VM+SSVMQN GFLVY LRI SQ +*LSCL HLGL RVSC RV *+ LR N * LF D QIQSKMILKWM+AAKLPKQ +QRRKGGM** L+FS EK *RL V*F MR SCF LD SI Y VMLSFHL VIH +AHMI +RI QFW LSRVTY DCL+ R IG T*KA L*TQC N DYHVTSK+ +*L LIM+SS ICMT S Subject 4028 LAL*VMRSSVMQNLGFLVYPLRILSQGN*LSCLVHLGLGRVSCTRVL*KGLRVNS*PLFLPDVL*QIQSKMILKWMIAAKLPKQVSQRRKGGM**LLRFSSEKLQD*RLATV*FLMRSSCFLLDTSIYACSLYVVMLSFHLPVIHVKAHMIRKRIGQFWALSRVTYLDCLRARRIGIT*KAGGL*TQCSNQDYHVTSKRAR*LPLSLIMRSSIICMTFS 4684
Grapevine rupestris stem pitting associated virus isolate SK704 C, complete genome
Sequence ID: KX274276.1 Length: 8726 Number of Matches: 6
Range 1: 4028 to 4684 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
519.3 bits(1127) | 0.0 | 215/219(98%) | 0/219(0%) | Minus/Plus |
Query 2 TGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFL 658 TGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKS+LYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIR+DAFISLAGDPCQSTYDSQKDRAILGAEQSDILR+LEGKTYRYNIESRRFVNPMFE RLPCHFKKGSMTAAFADYAIFHNMHDFL Subject 4028 TGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKSYLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRNDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRMLEGKTYRYNIESRRFVNPMFEFRLPCHFKKGSMTAAFADYAIFHNMHDFL 4684
Range 2: 4030 to 4683 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
456.5 bits(990) | 0.0 | 207/218(95%) | 0/218(0%) | Plus/Minus |
Query 3 RKSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTKRLLSMLYLYVFPXXXXXXXXXXAPKIARSFCESYVLWHGSPASEMKASLRMTSKHKSIYPGGNN*TSSKITQ*PAFKPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLGFISAVDIPESQGFASLNFSSLMTP 656 RKSC+LWKIA*SAKAAVIEPFLK*HGSL+SNIGFT RLLSMLYLYVFPSS LSMSLCSAPKIARSFCESYVLWHGSPASEMKASLRMTS+H+S+YPGGNN*TSSKITQ PAF+PETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYK LFPAPNVPSTTVSSLG ISAVDIPESQGFASLNFSSLMTP Subject 4030 RKSCMLWKIA*SAKAAVIEPFLK*HGSLNSNIGFTNRLLSMLYLYVFPSSILSMSLCSAPKIARSFCESYVLWHGSPASEMKASLRMTSRHRSMYPGGNN*TSSKITQWPAFRPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYK*LFPAPNVPSTTVSSLGLISAVDIPESQGFASLNFSSLMTP 4683
Range 3: 4030 to 4683 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
454.2 bits(985) | 0.0 | 188/218(86%) | 0/218(0%) | Minus/Plus |
Query 3 WCHK**KVQ*CKTLAFWYINCGYKAKRANCRAWHIWGWKEFLV*EFHEEI*GKICNFCFP*TSLGKFNQK*S*NG*WLQSCQSRQIKEGRVGCSDL*SFP*KSFWFEGWSLCDFR*GSVVSPWIYRFVFTCHTQ*CFHFTCW*SMPEHI*FTEGSSNFGS*AE*HTQTA*RKDI*VQHRKQTFCEPNV*I*TTMSLQKRFNDCSLC*LCNLPQYA*LP 656 WCHK**KVQ*CKTLAFWYINCGY AKRANCRAWHIWGWKE LV*+FHEE+* KICNFCFP*TSLGKFNQ+*S*NG*WLQSCQSRQIKEGRVGCS+ * FP*KSFW EGW LCDFR*GSVVSPWI+ + CHTQ* FHFTCW*SMPEHI*FT+GS FGS*AE HTQ A*RKD+*VQHRKQT CEPNV*I*TTMSLQK NDC LC*LCNLP +A*LP Subject 4030 WCHK**KVQ*CKTLAFWYINCGY*AKRANCRAWHIWGWKELLV*KFHEEV*RKICNFCFP*TSLGKFNQE*S*NG*WLQSCQSRQIKEGRVGCSNF*GFP*KSFWSEGWPLCDFR*GSVVSPWIH*SMSACHTQ*RFHFTCW*SMPEHI*FTKGSGYFGS*AERHTQNA*RKDV*VQHRKQTVCEPNV*I*TTMSLQKGLNDCCLC*LCNLP*HA*LP 4683
Range 4: 4029 to 4685 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
427.2 bits(926) | 0.0 | 192/219(88%) | 0/219(0%) | Minus/Plus |
Query 1 LVS*VMKSSVMQNPGFLVYQLRI*SQES*LSCLAHLGLERVSCIRVS*RDLRENL*LLFPLDEPWQIQSKMILKWMMAAKLPKQANQRRKGGM**PLKFSLEKFLV*RLVIV*FSMRFSCFPLDISICVYLSYAVMLSFHLLVIHARAHMIHRRIEQFWELSRVTYSDCLKERHIGTT*KADVL*TQCLNLDYHVTSKKVQ*LQPLLIMQSSTICMTSS 657 LVS*VMKSSVMQNPGFLVYQLRI SQES*LSCLAHLGLERV+CI+VS*R L+ENL*LLFPLDEPWQIQS+MILKWMMAAKLPKQANQRRKGGM** L+FSLEKFLV*RL IV*FSMRFSCFPLD I V LSYA+ LSFHLLVIHARAHMIH+RI FWELSR TYS+CLKER IGTT*KAD L*TQCLNLDYHVTSK+ Q*L PLLIMQSS CMTSS Subject 4029 LVS*VMKSSVMQNPGFLVYQLRILSQES*LSCLAHLGLERVTCIKVS*RGLKENL*LLFPLDEPWQIQSRMILKWMMAAKLPKQANQRRKGGM**LLRFSLEKFLV*RLAIV*FSMRFSCFPLDTLIYVCLSYAMTLSFHLLVIHARAHMIHKRIGLFWELSRATYSECLKERRIGTT*KADGL*TQCLNLDYHVTSKRAQ*LLPLLIMQSSITCMTSS 4685
Range 5: 4028 to 4684 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
423.5 bits(918) | 0.0 | 191/219(87%) | 0/219(0%) | Plus/Minus |
Query 2 EEVMHIVEDCIISKGCSH*TFFEVTW*SRFKHWVHKTSAFYVVPICLSFKQSEYVTLLSSQNCSXXXXXXXXXXWITSK*NESITAYDK*TQIDISRGKQLNLIENHTMTSLQTRNFSKENFKGHYIPPFLL*FACFGNFAAIIHFKIIFD*ICQGSSRGNKSYKFSLRSLHETLIQETLSSPKCAKHDS*LSWLYIRS*YTRKPGFCITELFITYDTS 658 EEVMH++EDCIISKG SH* FEVTW*S+FKHWVHK SAFYVVPI LSFK SEYV LLSSQN ILL*IICALAWITSK*NES+ AYDK T I++SRGKQLNLIENHTM SLQTRNFSKEN K +YIPPFLL*FACFGNFAAIIHFKII D*ICQGSSRGNKSYKFS R LHET IQ TLSSPKCAKHDS*LSWL IRS*YTRKPGFCITELFITYDTS Subject 4028 EEVMHVMEDCIISKGSSH*ALFEVTW*SKFKHWVHKPSAFYVVPIRLSFKHSEYVALLSSQNSPILL*IICALAWITSK*NESVIAYDKQT*INVSRGKQLNLIENHTMASLQTRNFSKENLKSYYIPPFLL*FACFGNFAAIIHFKIILD*ICQGSSRGNKSYKFSFRPLHETFIQVTLSSPKCAKHDS*LSWLNIRS*YTRKPGFCITELFITYDTS 4684
Range 6: 4065 to 4685 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
408.9 bits(886) | 0.0 | 177/207(86%) | 0/207(0%) | Plus/Minus |
Query 1 GGSHAYCGRLHNQQRLQSLNLF*SDMVV*IQTLGSQNVCFLCCTYMSFLQAV*VCHSAQLPKLLDPSVNHMCSGMDHQQVK*KHHCV*QVNTNRYIQGETTEPHRKSHNDQPSNQKLF*GKLQRSLHPTLPSLICLLWQLCSHHPFQDHF*LNLPRLV*GKQKLQIFPQISS*NSYTRNSFQPQMCQARQLALLALYPQLIYQKARV 621 GGSHA GRLHNQQR QSL+ F*SDMVV*IQTLGSQ VCFLCCTY SFLQA *VC SAQLPK DP VNHMCSGMDHQQVK*K HCV*Q + ++ IQGETTEPHRKSHN QPS+QKLF*GK Q+ LHPTLPSLICLLWQLCSHHPFQDH *LNLPRLV*GKQKLQIF Q SS*N YT NSFQPQMCQARQLALLA YPQLIYQKARV Subject 4065 GGSHACYGRLHNQQRQQSLSPF*SDMVV*IQTLGSQTVCFLCCTYTSFLQAF*VCRSAQLPK*PDPFVNHMCSGMDHQQVK*KRHCV*QADIDQCIQGETTEPHRKSHNGQPSDQKLF*GKPQKLLHPTLPSLICLLWQLCSHHPFQDHS*LNLPRLV*GKQKLQIFLQTSS*NFYTSNSFQPQMCQARQLALLA*YPQLIYQKARV 4685
Rupestris stem pitting associated virus 1, complete genome
Sequence ID: AF057136.1 Length: 8744 Number of Matches: 6
Range 1: 4028 to 4684 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
517.9 bits(1124) | 0.0 | 214/219(98%) | 0/219(0%) | Minus/Plus |
Query 2 TGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFL 658 TGVISDEKFSDAKPWLSGIST DIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDD CKVAKAG+SKKEGWDVVTFEVFLRKV+GLKAGHCVIFDEVQLFPPGYIDLCLL+IRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFL Subject 4028 TGVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDSCKVAKAGRSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQLFPPGYIDLCLLIIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFL 4684
Range 2: 4030 to 4683 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
430.0 bits(932) | 0.0 | 200/218(92%) | 0/218(0%) | Plus/Minus |
Query 3 RKSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTKRLLSMLYLYVFPXXXXXXXXXXAPKIARSFCESYVLWHGSPASEMKASLRMTSKHKSIYPGGNN*TSSKITQ*PAFKPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLGFISAVDIPESQGFASLNFSSLMTP 656 RKSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFT LLSMLYLYV PSSSLSMSLCSAPKIARSFCESYVL HGSPASEMKASLR+ SKH+S+YPGGNN TSSKITQ PAF P TFLRKTSKVTTSHPSFFDLPALATLQ SSISRSFLIEFAKARLGETKVTN PSDLFMKLLYKKLFPAPNVPSTTV+SLG IS VDIPESQGFASLNFSSL+TP Subject 4030 RKSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTNLLLSMLYLYVLPSSSLSMSLCSAPKIARSFCESYVL*HGSPASEMKASLRIISKHRSMYPGGNNWTSSKITQWPAFNPATFLRKTSKVTTSHPSFFDLPALATLQLSSISRSFLIEFAKARLGETKVTNLPSDLFMKLLYKKLFPAPNVPSTTVNSLGLISVVDIPESQGFASLNFSSLITP 4683
Range 3: 4028 to 4684 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
341.5 bits(739) | 0.0 | 153/219(70%) | 0/219(0%) | Plus/Minus |
Query 2 EEVMHIVEDCIISKGCSH*TFFEVTW*SRFKHWVHKTSAFYVVPICLSFKQSEYVTLLSSQNCSXXXXXXXXXXWITSK*NESITAYDK*TQIDISRGKQLNLIENHTMTSLQTRNFSKENFKGHYIPPFLL*FACFGNFAAIIHFKIIFD*ICQGSSRGNKSYKFSLRSLHETLIQETLSSPKCAKHDS*LSWLYIRS*YTRKPGFCITELFITYDTS 658 E+VMHI+EDCIIS+ SH FEVTW S F+HWVHK AFYV+PI + KQS+YVTLLS+QNC ILL +ICAL WITSK*NESIT Y+K ID+SR KQL+LI+NHT+ SLQ+ NFSKEN K +YIPPFLL* CF NFAAIIHFKIIFD*IC +S NK Y+F+LR HETL+QETL SPKC KHDS WL I S YTRKP FCITEL ITY+ S Subject 4028 EKVMHIMEDCIISESGSHRALFEVTWQS*FEHWVHKPPAFYVIPIRFALKQSKYVTLLSAQNCPILLRVICALTWITSK*NESITTYNKQA*IDVSRRKQLDLIKNHTVASLQSCNFSKENLKSYYIPPFLL*PTCFSNFAAIIHFKIIFD*IC*STSGRNKGYEFTLRPFHETLVQETLPSPKCTKHDSQFPWLNISSRYTRKPRFCITELLITYNAS 4684
Range 4: 4030 to 4680 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
322.7 bits(698) | 0.0 | 147/217(68%) | 0/217(0%) | Minus/Plus |
Query 6 WCHK**KVQ*CKTLAFWYINCGYKAKRANCRAWHIWGWKEFLV*EFHEEI*GKICNFCFP*TSLGKFNQK*S*NG*WLQSCQSRQIKEGRVGCSDL*SFP*KSFWFEGWSLCDFR*GSVVSPWIYRFVFTCHTQ*CFHFTCW*SMPEHI*FTEGSSNFGS*AE*HTQTA*RKDI*VQHRKQTFCEPNV*I*TTMSLQKRFNDCSLC*LCNLPQYA*L 656 W +K**+VQ*CKTLAFWYI Y AK +CRAW+IWGW+EFLV EFHE++*G I N CF T KFNQK*S*NG* LQSC SR +KEGRVGCS+ * FP*KS EGW LCDF *G VVS WI+R + +T *CFHFTCW*SM +HI* +GS NFG *AE*HT TA* +++*V HRKQ CEPNV I T MSLQK +DC *LCNLP YA*L Subject 4030 WRYK**EVQ*CKTLAFWYIYY*Y*AKGIDCRAWYIWGWEEFLVQEFHEKV*G*IRNLCFSQTCFSKFNQK*S*NG**LQSC*SR*VKEGRVGCSNF*GFP*KSCRIEGWPLCDF**GPVVSSWIHRSMLAYYT**CFHFTCW*SMSKHI*LAKGSGNFGR*AE*HT*TA*GQNV*V*HRKQEVCEPNVRIKTAMSLQKGLDDCRFR*LCNLP*YA*L 4680
Range 5: 4029 to 4685 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
300.3 bits(649) | 0.0 | 151/219(69%) | 0/219(0%) | Minus/Plus |
Query 1 LVS*VMKSSVMQNPGFLVYQLRI*SQES*LSCLAHLGLERVSCIRVS*RDLRENL*LLFPLDEPWQIQSKMILKWMMAAKLPKQANQRRKGGM**PLKFSLEKFLV*RLVIV*FSMRFSCFPLDISICVYLSYAVMLSFHLLVIHARAHMIHRRIEQFWELSRVTYSDCLKERHIGTT*KADVL*TQCLNLDYHVTSKKVQ*LQPLLIMQSSTICMTSS 657 L *VM+SSVMQN GFLVY L I SQ +*LSCL HLGL RVSC RVS*+ LR N * LF D QIQSKMILKWM+AAKL KQ QRRKGGM** L+FSLEK *RL V*F MR SCF LD SI L Y VMLSFHLLVIH +AHM +RI QFW LSRVTY DCL+ + IG T*KA L*TQC N D HVTSK+ +*L LIMQSS ICMT S Subject 4029 LAL*VMRSSVMQNLGFLVYLLLILSQGN*LSCLVHLGLGRVSCTRVS*KGLRVNS*PLFLPDVL*QIQSKMILKWMIAAKLLKQVGQRRKGGM**LLRFSLEKLQD*RLATV*FLMRSSCFLLDTSIYACLLYVVMLSFHLLVIHVKAHMTRKRIGQFWALSRVTYLDCLRAKRIGIT*KAGGL*TQCSNQDCHVTSKRAR*LPLSLIMQSSIICMTFS 4685
Range 6: 4065 to 4685 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
295.7 bits(639) | 0.0 | 139/207(67%) | 0/207(0%) | Plus/Minus |
Query 1 GGSHAYCGRLHNQQRLQSLNLF*SDMVV*IQTLGSQNVCFLCCTYMSFLQAV*VCHSAQLPKLLDPSVNHMCSGMDHQQVK*KHHCV*QVNTNRYIQGETTEPHRKSHNDQPSNQKLF*GKLQRSLHPTLPSLICLLWQLCSHHPFQDHF*LNLPRLV*GKQKLQIFPQISS*NSYTRNSFQPQMCQARQLALLALYPQLIYQKARV 621 G SHAY GRLHNQ++ QS + F*SDM V I+TLGSQ CFLC TY QAV*VCHSAQ PKL DP +HMC MDHQQVK*KHH V* + +R IQ ETT PH+KSH+ QPS +LF*GK Q+ LHPTLPSL LL QLCS+HPFQDHF*LNL + V KQ+L+I+PQ S*NS TRNS QPQM QARQ LA Y IYQKA+V Subject 4065 GESHAYYGRLHNQRKRQSSSPF*SDMAVLIRTLGSQTSCFLCYTYTFCPQAV*VCHSAQRPKLPDPFASHMCFDMDHQQVK*KHHYV**ASIDRCIQEETTGPHQKSHSGQPSILQLF*GKPQKLLHPTLPSLTYLL*QLCSYHPFQDHF*LNLLKHVWEKQRLRIYPQTFS*NSCTRNSSQPQMYQARQSIPLA*YQ**IYQKAKV 4685
Grapevine Rupestris stem pitting associated virus, complete genome
Sequence ID: AF026278.1 Length: 8725 Number of Matches: 6
Range 1: 4027 to 4683 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
517.9 bits(1124) | 0.0 | 214/219(98%) | 0/219(0%) | Minus/Plus |
Query 2 TGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFL 658 TGVISDEKFSDAKPWLSGIST DIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDD CKVAKAG+SKKEGWDVVTFEVFLRKV+GLKAGHCVIFDEVQLFPPGYIDLCLL+IRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFL Subject 4027 TGVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDSCKVAKAGRSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQLFPPGYIDLCLLIIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFL 4683
Range 2: 4029 to 4682 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
430.0 bits(932) | 0.0 | 200/218(92%) | 0/218(0%) | Plus/Minus |
Query 3 RKSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTKRLLSMLYLYVFPXXXXXXXXXXAPKIARSFCESYVLWHGSPASEMKASLRMTSKHKSIYPGGNN*TSSKITQ*PAFKPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLGFISAVDIPESQGFASLNFSSLMTP 656 RKSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFT LLSMLYLYV PSSSLSMSLCSAPKIARSFCESYVL HGSPASEMKASLR+ SKH+S+YPGGNN TSSKITQ PAF P TFLRKTSKVTTSHPSFFDLPALATLQ SSISRSFLIEFAKARLGETKVTN PSDLFMKLLYKKLFPAPNVPSTTV+SLG IS VDIPESQGFASLNFSSL+TP Subject 4029 RKSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTNLLLSMLYLYVLPSSSLSMSLCSAPKIARSFCESYVL*HGSPASEMKASLRIISKHRSMYPGGNNWTSSKITQWPAFNPATFLRKTSKVTTSHPSFFDLPALATLQLSSISRSFLIEFAKARLGETKVTNLPSDLFMKLLYKKLFPAPNVPSTTVNSLGLISVVDIPESQGFASLNFSSLITP 4682
Range 3: 4027 to 4683 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
340.6 bits(737) | 0.0 | 153/219(70%) | 0/219(0%) | Plus/Minus |
Query 2 EEVMHIVEDCIISKGCSH*TFFEVTW*SRFKHWVHKTSAFYVVPICLSFKQSEYVTLLSSQNCSXXXXXXXXXXWITSK*NESITAYDK*TQIDISRGKQLNLIENHTMTSLQTRNFSKENFKGHYIPPFLL*FACFGNFAAIIHFKIIFD*ICQGSSRGNKSYKFSLRSLHETLIQETLSSPKCAKHDS*LSWLYIRS*YTRKPGFCITELFITYDTS 658 E+VMHI+EDCIIS+ SH FEVTW S F+HWVHK AFYV+PI L+ KQS+YVTLLS+QNC ILL IICAL WIT K*NESIT Y+K ID+SR KQL+LI+NHT+ SLQ+ NFS+EN K +YIPPFLL* CFGNFAAIIHFKIIFD*IC +S NK Y+ +LR HETL+Q+TL SPKC KHDS WL IRS YTRKP FCITEL ITY+ S Subject 4027 EKVMHIMEDCIISESGSHRALFEVTWQS*FEHWVHKPPAFYVIPIRLALKQSKYVTLLSAQNCPILLRIICALTWITGK*NESITTYNKQA*IDVSRRKQLDLIKNHTVASLQSCNFSEENLKSYYIPPFLL*PTCFGNFAAIIHFKIIFD*IC*STSGRNKGYELTLRPFHETLVQKTLPSPKCTKHDSQFPWLNIRSRYTRKPRFCITELLITYNAS 4683
Range 4: 4029 to 4679 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
325.0 bits(703) | 0.0 | 146/217(67%) | 0/217(0%) | Minus/Plus |
Query 6 WCHK**KVQ*CKTLAFWYINCGYKAKRANCRAWHIWGWKEFLV*EFHEEI*GKICNFCFP*TSLGKFNQK*S*NG*WLQSCQSRQIKEGRVGCSDL*SFP*KSFWFEGWSLCDFR*GSVVSPWIYRFVFTCHTQ*CFHFTCW*SMPEHI*FTEGSSNFGS*AE*HTQTA*RKDI*VQHRKQTFCEPNV*I*TTMSLQKRFNDCSLC*LCNLPQYA*L 656 W +K**+VQ*CKTLAFWYI GY AK +CRAW+IWGW+EF V EFHE++*G + N CF T KFNQK*S*NG* LQSCQSR +KEGRVGCS+ * FP KS EGW LCDF *G +VS WI+R + +T *CFHFTC *SM +HI*F +GS NFG *AE*HT TA* +D+*V HRKQ CEPNV I T MSLQK +DC *LCNLP YA*L Subject 4029 WRYK**EVQ*CKTLAFWYIYYGY*AKGIDCRAWYIWGWEEFFVQEFHEKV*G*VRNLCFSQTCFSKFNQK*S*NG**LQSCQSR*VKEGRVGCSNF*GFPQKSCRIEGWPLCDF**GPIVSSWIHRSMLAYYT**CFHFTCR*SMSKHI*FAKGSGNFGR*AE*HT*TA*GQDV*V*HRKQEVCEPNVRIKTAMSLQKGLDDCRFR*LCNLP*YA*L 4679
Range 5: 4064 to 4684 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
303.0 bits(655) | 0.0 | 139/207(67%) | 0/207(0%) | Plus/Minus |
Query 1 GGSHAYCGRLHNQQRLQSLNLF*SDMVV*IQTLGSQNVCFLCCTYMSFLQAV*VCHSAQLPKLLDPSVNHMCSGMDHQQVK*KHHCV*QVNTNRYIQGETTEPHRKSHNDQPSNQKLF*GKLQRSLHPTLPSLICLLWQLCSHHPFQDHF*LNLPRLV*GKQKLQIFPQISS*NSYTRNSFQPQMCQARQLALLALYPQLIYQKARV 621 G SHAY GRLHNQ++ QS + F*SDM V I+TLGSQ CFLC TY S QAV*VCHSAQ PKL DP NHMC MDH+QVK*KHH V* + +R IQ ET PH+KSH+ QPS +LF*GK Q+ LHPTLPSL LLWQLCS+HPFQDHF*LNL + V KQ+L+ +PQ S*NS T+NS QPQM QARQ LA YP IYQKA+V Subject 4064 GESHAYYGRLHNQRKRQSSSPF*SDMAVLIRTLGSQTSCFLCYTYTSCPQAV*VCHSAQRPKLPDPFANHMCFDMDHRQVK*KHHYV**ASIDRCIQEETIGPHQKSHSGQPSILQLF*GKPQKLLHPTLPSLTYLLWQLCSYHPFQDHF*LNLLKHVWEKQRLRTYPQTFS*NSCTKNSSQPQMYQARQSIPLA*YP**IYQKAKV 4684
Range 6: 4028 to 4684 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
299.4 bits(647) | 0.0 | 150/219(68%) | 0/219(0%) | Minus/Plus |
Query 1 LVS*VMKSSVMQNPGFLVYQLRI*SQES*LSCLAHLGLERVSCIRVS*RDLRENL*LLFPLDEPWQIQSKMILKWMMAAKLPKQANQRRKGGM**PLKFSLEKFLV*RLVIV*FSMRFSCFPLDISICVYLSYAVMLSFHLLVIHARAHMIHRRIEQFWELSRVTYSDCLKERHIGTT*KADVL*TQCLNLDYHVTSKKVQ*LQPLLIMQSSTICMTSS 657 L *VM+SSVMQN GFLVY LRI SQ +*LSCL HLGL RV C RVS*+ LR + * LF D QIQSKMILKWM+AAKLPKQ QRRKGGM** L+FS EK *RL V*F MR +CF LD SI L Y VMLSFHL VIH +AHMI +RI QFW LSRVTY DCL+ R IG T*KA L*TQC N D HVTSK+ +*L LIMQSS ICMT S Subject 4028 LAL*VMRSSVMQNLGFLVYLLRILSQGN*LSCLVHLGLGRVFCTRVS*KGLRVSS*PLFLPDVL*QIQSKMILKWMIAAKLPKQVGQRRKGGM**LLRFSSEKLQD*RLATV*FLMRSNCFLLDTSIYACLLYVVMLSFHLPVIHVKAHMIRKRIGQFWALSRVTYLDCLRARRIGIT*KAGGL*TQCSNQDCHVTSKRAR*LPLSLIMQSSIICMTFS 4684
Nucleotide Sequence (803 letters)
Query ID: | ds2016-132_4 |
Query definition: | No definition line |
Query length: | 951 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
590.3 | 2416.6 | 33% | 1.058e-166 | 66% | AF057136.1 | |
612.8 | 3280.6 | 33% | 1.844e-173 | 94% | AB277784.1 | |
605.4 | 3247.6 | 33% | 2.97e-171 | 93% | FR691076.1 | |
600.4 | 2973.1 | 33% | 9.772e-170 | 83% | KX274276.1 | |
592.2 | 2975.4 | 33% | 2.97e-167 | 83% | JX559646.1 |
Alignments
Rupestris stem pitting associated virus 1, complete genome
Sequence ID: AF057136.1 Length: 8744 Number of Matches: 9
Range 1: 6434 to 7207 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
590.3 bits(1282) | 0.0 | 246/258(95%) | 0/258(0%) | Minus/Plus |
Query 29 EMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKHYSPGCAVQGKVNILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAA 802 EMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFE +D*ALSIW SIMNNLVKALSAFEF+GVFSVLKFPVVIHSVPGSGKSSLIRELISEDE+F+AFTAGVPDSPNLTGRYIK YSPGCAV GKVNILDEYLSVQD SGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLD VIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAA Subject 6434 EMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHYLSIMNNLVKALSAFEFVGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDKVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAA 7207
Range 2: 6694 to 6969 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
188.5 bits(405) | 0.0 | 81/92(88%) | 0/92(0%) | Plus/Minus |
Query 267 EERYLQVFTPNLQVLDLMKCASLGILIFWYGSENSTSKPEMS*TDKYSSSIFTFPCTAHPGE*CLMYLPVRLGLSGTPAVKATKLSSSEINS 542 EERYLQVFTPNLQV DLMKCASLG+L+FWYGSENSTSKPE S TDKYSSSI TFP TAHPGE* LMYLPVRLGLSGTPAVKA K SSSEI+S Subject 6694 EERYLQVFTPNLQVFDLMKCASLGMLMFWYGSENSTSKPEKSWTDKYSSSILTFPGTAHPGE*GLMYLPVRLGLSGTPAVKAMKFSSSEISS 6969
Range 3: 7018 to 7206 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
140.4 bits(300) | 0.0 | 61/63(97%) | 0/63(0%) | Plus/Minus |
Query 30 AAM*NQCLSSGVGSLDFKRVTTLKVEPLTSHGNLNSELCATARSTASLPKHISTPSTSRVKGD 218 AAM*NQCLSSGVGSLDFKRVTTLKVEPLTS GNLNSELCATARSTASLPKHISTPSTS VKGD Subject 7018 AAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSELCATARSTASLPKHISTPSTSSVKGD 7206
Range 4: 6433 to 6642 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.9 bits(275) | 0.0 | 61/70(87%) | 0/70(0%) | Plus/Minus |
Query 594 NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEIEHLILCLFLTRNLTQL*CASTSSSVIIS 803 NLSTLKTP NS ADNALTKLFIIL+ QILKA*S SNRPEIEHLILCLFLT+NLTQL* ASTSSSVIIS Subject 6433 NLSTLKTPTNSNADNALTKLFIILK*CQILKA*SIASNRPEIEHLILCLFLTKNLTQL*WASTSSSVIIS 6642
Range 5: 6434 to 7204 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
379.1 bits(821) | 0.0 | 171/257(67%) | 0/257(0%) | Plus/Minus |
Query 32 SDVKPVPVLWGWVS*FQKGYHIEG*TSNLTRQLEFRVVRNSEIYRLLAKTYQHPLNI*SEGRSHNDVVQPVAANFETERGKVFASVHTKPTSLGLNEMRLFGNTDILVRV*KQYIKT*NVLNRQVLIKYIHFPLHCASW*VMLDVPPCEVRTVWNTSCESHETLVL*D*LPYXXXXXXXXXXMYNNWKFEHTENTYKLEG*QCFN*IIHNTRTTPNT*GLINHFKQA*N*APHFMLVPNQEPHTIVVCLHLLFCHHF 802 S+VKPVP+LWGW+S*FQK Y ++ *TSN TR EFRVVRNSEI+ LL K Y HP NI* + R HND VQ V AN +TE GK+FAS+H KPTS L+EM LF N D+LV V +Q+IKT* +L+ QVLIKYI+FP HC W + L+VP CE+R VWNT CES+E L+L +*LPY*TT TTTRHTM + WKF+HTENTYKL+ *QCFN*IIHNT+ PNT*GLIN FK A*N*A H MLVP+QE +TI++ LH HHF Subject 6434 SNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVVRNSEIHCLLTKAY*HPFNI*CKRRPHNDFVQTVTANLKTEGGKIFASIHAKPTSF*LDEMCLFRNADVLVWVREQHIKT*KILDGQVLIKYINFPWHCTPWRIRLNVPSCEIRAVWNTCCESYEILILGN*LPY*TTFTTTRHTMNDYWKFKHTENTYKLKC*QCFN*IIHNTQIMPNT*GLINSFK*A*N*ASHLMLVPDQESNTIIMGLHFFLGHHF 7204
Range 6: 6433 to 7206 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
375.4 bits(813) | 0.0 | 175/258(68%) | 0/258(0%) | Minus/Plus |
Query 30 *NDDRRGGGGTLQLCEVPG*EQA*NEVLNFRPV*SG*LGLKYLALFEYYE*FS*SIVSLRVYRCFQCAQISSCYT*CAW*W*E*FNKGVNLRGREFRGFHSWCSRQS*PHREVHQALLTRMRSARESEYT**VLVCSRHFRF*CTVFRPVPEYQYSQRGAFH*VQDL*VWCEHLQIPFLFRFQS*QRRAGRRHCGIALHSRC*GGADMFWQGGGRSRCCAQL*IQVAV*G*RFNLQCGNPFEIKRPNPRGQALVLHRC 803 *NDDR GG L LC + G EQA*+E+LNFRP+*S *LGLKYLALFEYYE*FS*SIVS+ V RCFQCA ISS ++*CAW*W*+*FNKG N RG EF FHS CSRQ * HR+VH AL +R+ SARES YT**VLV R FRF*C V P+P++Q+S RG FH V++L*VW E+LQI FL RF *Q R G+ HCG+A ++RC* GA+M W GG SRCCAQL*IQ+ +* *RFN N FEIKR NPRG ALVLH C Subject 6433 *NDDRGRSGGPL*LC*ILGQEQA*DEMLNFRPI*SY*LGLKYLALFEYYE*FS*SIVSI*VCRCFQCA*ISSSHS*CAW*W*K*FNKGANFRG*EFHSFHSRCSRQP*SHRKVH*ALFSRVCSARES*YT**VLVRPRFFRF*CAVLGPIPKHQHS*RGTFHQVKNL*VWREYLQISFLLRF*G*Q*RFGQSHCGVAFYTRC*RGANMLW*GGSGSRCCAQL*IQITL*S*RFNF*RRNSFEIKRSNPRG*ALVLHCC 7206
Range 7: 6435 to 6971 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
230.2 bits(496) | 0.0 | 125/179(70%) | 0/179(0%) | Plus/Minus |
Query 265 KRKGICKCSHQTYKSWT**NAPLWEY*YSGTGLKTVHQNLKCLEQTSTHQVYSLSLALRILVSNA*CTSL*G*DCLEHQL*KPRNSRPLRLTPLLNYSYHYQAHYV*QLEI*AH*KHXXXXXXXXXXXNYS*YSNNAKYLRPNQPLQTGLKLSTSFYACS*PGTSHNCSVPPPPLLSSF 801 +RK ICK S QTYK T**N PL E * G G +T HQNLK L +TSTHQVY LSLAL L + A*CT L* * CLEH L*K NS P +L PLLNY YHYQAHY * LEI*AH*KHL T+ LTML*LNYS*YSNNAKYLRPNQ LQ GLKLS S YACS*P HN + PP SSF Subject 6435 RRKDICKYSRQTYKFLT**NVPL*EC*CFGMGPRTAHQNLKNLGRTSTHQVY*LSLALHTLENKA*CTFL*D*GCLEHLL*KL*NSHPRKLAPLLNYFYHYQAHYE*LLEI*AH*KHLQTQMLTML*LNYS*YSNNAKYLRPNQ*LQIGLKLSISSYACS*PRI*HNYNGPPLLPRSSF 6971
Range 8: 7032 to 7217 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
88.6 bits(187) | 0.0 | 42/62(68%) | 0/62(0%) | Plus/Minus |
Query 19 CLVGQRCKTSACPLGLGLLISKGLPH*RLNL*PHTAT*IQSCAQQRDLPPPCQNISAPPQHL 204 C++ Q+CKTSA PLGL LLISK L *+LNL* H *IQSCAQQRD PP Q+I AP QHL Subject 7032 CVL*QQCKTSAYPLGLDLLISKELRR*KLNL*LHKVI*IQSCAQQRDPLPPYQSILAPLQHL 7217
Range 9: 6435 to 7217 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
295.2 bits(638) | 0.0 | 172/261(66%) | 0/261(0%) | Minus/Plus |
Query 19 K**QKRRWRHTTIV*GSWLGTSIK*GAQFQACLKWLIRP*VFGVVRVL*II*LKHCQPSSL*VFSVCSNFQLLYIVCLXXXXXXX*GS*SQRTRVSWLSQLVFQTVLTSQGGTSSITHQDAQCKGK*IYLMSTCLFKTFQVLMYCFQTRTRISVFPKRRISLSPRLVGLV*TLANTFPLSVSKLAATGWTTSLWDRPSL*MLRGC*YVXXXXXXXXXXXXXLNSSCRVRLEVQPSMW*PF*NQETQPQRTGTGFTSLPNQT 801 K** +++WR IV SW GTSI+* AQFQA LK LIRP*VFG++ VL*II*LKHCQ SL*VFSVC NFQ +IVCLVVV+VV**GS* R R+S LSQ VFQT L SQ GT S+ Q QC+GK IYLMSTC K FQVLM C +T T+ S F KR IS S +LVGL * LAN FP SV +LA T WT SLW R *ML+GC*Y L RR+ ISLLRTTLNS+ V+LEVQ * F*NQE QPQR GTGFT L T Subject 6435 K**PRKKWRPIIIVLDSWSGTSIR*DAQFQAYLKLLIRP*VFGII*VL*II*LKHCQHLSL*VFSVCLNFQ*SFIVCLVVVKVV**GS*FPRMRIS*LSQQVFQTALISQEGTLSLILQGVQCQGKLIYLMSTCPSKIFQVLMCCSRTHTKTSAFLKRHISSSQKLVGLA*ILANIFPPSVLRLAVTVWTKSLWGRLLH*MLKGC*YALVRRQWISLLRTTLNSNYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDT 7217
Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OE8
Sequence ID: AB277784.1 Length: 2876 Number of Matches: 11
Range 1: 689 to 1462 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
612.8 bits(1331) | 0.0 | 257/258(100%) | 0/258(0%) | Minus/Plus |
Query 29 EMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKHYSPGCAVQGKVNILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAA 802 EMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIK YSPGCAVQGKVNILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAA Subject 689 EMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKVNILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAA 1462
Range 2: 688 to 1461 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
580.7 bits(1261) | 0.0 | 247/258(96%) | 0/258(0%) | Minus/Plus |
Query 30 *NDDRRGGGGTLQLCEVPG*EQA*NEVLNFRPV*SG*LGLKYLALFEYYE*FS*SIVSLRVYRCFQCAQISSCYT*CAW*W*E*FNKGVNLRGREFRGFHSWCSRQS*PHREVHQALLTRMRSARESEYT**VLVCSRHFRF*CTVFRPVPEYQYSQRGAFH*VQDL*VWCEHLQIPFLFRFQS*QRRAGRRHCGIALHSRC*GGADMFWQGGGRSRCCAQL*IQVAV*G*RFNLQCGNPFEIKRPNPRGQALVLHRC 803 *NDDRRGGGGTLQLCEVPG*EQA*+EVLNFRPV*SG*LGLKYLALFEYYE*FS*SI+SLRVYRCFQC QISSCYT*CAW*W*E*FNKGVNLRGREFRGFHS CSRQS*PHREVHQALLTRMRSAR+SEYT**VLV SRHF F*CTVFRPVPEYQYSQRGAFH*V DL*VWCEHLQIPFLFRFQS*QRRAGRRHCGIALHSRC* GADMFWQGGGRSRCCAQL*IQV V*G RFNLQCGNPFEIKRPNPRGQALVLHRC Subject 688 *NDDRRGGGGTLQLCEVPG*EQA*DEVLNFRPV*SG*LGLKYLALFEYYE*FS*SIISLRVYRCFQCTQISSCYT*CAW*W*E*FNKGVNLRGREFRGFHSGCSRQS*PHREVHQALLTRMRSARQSEYT**VLVRSRHFGF*CTVFRPVPEYQYSQRGAFH*V*DL*VWCEHLQIPFLFRFQS*QRRAGRRHCGIALHSRC*RGADMFWQGGGRSRCCAQL*IQVTV*GSRFNLQCGNPFEIKRPNPRGQALVLHRC 1461
Range 3: 689 to 1462 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
559.2 bits(1214) | 0.0 | 247/258(96%) | 0/258(0%) | Plus/Minus |
Query 29 GSDVKPVPVLWGWVS*FQKGYHIEG*TSNLTRQLEFRVVRNSEIYRLLAKTYQHPLNI*SEGRSHNDVVQPVAANFETERGKVFASVHTKPTSLGLNEMRLFGNTDILVRV*KQYIKT*NVLNRQVLIKYIHFPLHCASW*VMLDVPPCEVRTVWNTSCESHETLVL*D*LPYXXXXXXXXXXMYNNWKFEHTENTYKLEG*QCFN*IIHNTRTTPNT*GLINHFKQA*N*APHFMLVPNQEPHTIVVCLHLLFCHHF 802 GSDVKPVPVLWGWVS*FQKGYHIEG*TSNLTR LEFRVVRNSEIYRLLAKTYQHP NI*SEGRSHNDVVQPVAANFETERGKVFASVHTKPTSL LNEMRLFGNTDILVRV*KQYIKT NVLN QVLIKYIHF LHCASW*V LDVPPCEVRTVWNT CESHETLVL*D*LPY*TTLTTTRHTMYNNWKFE+TENTYKLEG* CFN*IIHNTRTTPNT*GLINHFKQA*N*APH MLVPNQEPHTIVVCLHLLFCHHF Subject 689 GSDVKPVPVLWGWVS*FQKGYHIEG*TSNLTR*LEFRVVRNSEIYRLLAKTYQHPFNI*SEGRSHNDVVQPVAANFETERGKVFASVHTKPTSLRLNEMRLFGNTDILVRV*KQYIKTRNVLNGQVLIKYIHFALHCASW*VRLDVPPCEVRTVWNTRCESHETLVL*D*LPY*TTLTTTRHTMYNNWKFEYTENTYKLEG**CFN*IIHNTRTTPNT*GLINHFKQA*N*APHLMLVPNQEPHTIVVCLHLLFCHHF 1462
Range 4: 876 to 1226 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
254.9 bits(550) | 0.0 | 110/117(94%) | 0/117(0%) | Plus/Minus |
Query 265 KRKGICKCSHQTYKSWT**NAPLWEY*YSGTGLKTVHQNLKCLEQTSTHQVYSLSLALRILVSNA*CTSL*G*DCLEHQL*KPRNSRPLRLTPLLNYSYHYQAHYV*QLEI*AH*KH 615 KRKGICKCSHQTYKS T**NAPLWEY*YSGTGLKTVHQN KCLE+TSTHQVYSL LALRILVS A*CTSL*G*DCLEH L*KPRNSRPLRLTPLLNYSYHYQAHYV*QLEI* H*KH Subject 876 KRKGICKCSHQTYKS*T**NAPLWEY*YSGTGLKTVHQNPKCLERTSTHQVYSLCLALRILVSKA*CTSL*G*DCLEHPL*KPRNSRPLRLTPLLNYSYHYQAHYV*QLEI*VH*KH 1226
Range 5: 688 to 897 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
154.6 bits(331) | 0.0 | 70/70(100%) | 0/70(0%) | Plus/Minus |
Query 594 NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEIEHLILCLFLTRNLTQL*CASTSSSVIIS 803 NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEIEHLILCLFLTRNLTQL*CASTSSSVIIS Subject 688 NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEIEHLILCLFLTRNLTQL*CASTSSSVIIS 897
Range 6: 1273 to 1461 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.0 bits(308) | 0.0 | 62/63(98%) | 0/63(0%) | Plus/Minus |
Query 30 AAM*NQCLSSGVGSLDFKRVTTLKVEPLTSHGNLNSELCATARSTASLPKHISTPSTSRVKGD 218 AAM*NQCLSSGVGSLDFKRVTTLKVEP TSHGNLNSELCATARSTASLPKHISTPSTSRVKGD Subject 1273 AAM*NQCLSSGVGSLDFKRVTTLKVEPRTSHGNLNSELCATARSTASLPKHISTPSTSRVKGD 1461
Range 7: 690 to 1313 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
422.2 bits(915) | 0.0 | 198/208(95%) | 0/208(0%) | Minus/Plus |
Query 178 K**QKRRWRHTTIV*GSWLGTSIK*GAQFQACLKWLIRP*VFGVVRVL*II*LKHCQPSSL*VFSVCSNFQLLYIVCLXXXXXXX*GS*SQRTRVSWLSQLVFQTVLTSQGGTSSITHQDAQCKGK*IYLMSTCLFKTFQVLMYCFQTRTRISVFPKRRISLSPRLVGLV*TLANTFPLSVSKLAATGWTTSLWDRPSL*MLRGC*YV 801 K**QKRRWRHTTIV*GSWLGTSI+*GAQFQACLKWLIRP*VFGVVRVL*II*LKH QPSSL*VFSV SNFQLLYIVCLVVVRVV**GS*SQRTRVSWLSQ VFQTVLTSQGGTSS+THQDAQCK K*IYLMSTC FKTF+VLMYCFQTRTRISVFPKRRISLS RLVGLV*TLANTFPLSVSKLAATGWTTSLWDRPSL*ML+GC*YV Subject 690 K**QKRRWRHTTIV*GSWLGTSIR*GAQFQACLKWLIRP*VFGVVRVL*II*LKHYQPSSL*VFSVYSNFQLLYIVCLVVVRVV**GS*SQRTRVSWLSQRVFQTVLTSQGGTSSLTHQDAQCKAK*IYLMSTCPFKTFRVLMYCFQTRTRISVFPKRRISLSLRLVGLV*TLANTFPLSVSKLAATGWTTSLWDRPSL*MLKGC*YV 1313
Range 8: 1356 to 1463 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
82.2 bits(173) | 0.0 | 34/36(94%) | 0/36(0%) | Minus/Plus |
Query 28 NSSCRVRLEVQPSMW*PF*NQETQPQRTGTGFTSLP 135 NSS RVR EVQPSMW*PF*NQETQPQRTGTGFTSLP Subject 1356 NSSYRVRFEVQPSMW*PF*NQETQPQRTGTGFTSLP 1463
Range 9: 949 to 1224 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
210.5 bits(453) | 0.0 | 90/92(98%) | 0/92(0%) | Plus/Minus |
Query 267 EERYLQVFTPNLQVLDLMKCASLGILIFWYGSENSTSKPEMS*TDKYSSSIFTFPCTAHPGE*CLMYLPVRLGLSGTPAVKATKLSSSEINS 542 EERYLQVFTPNLQVLDLMKCASLGILIFWYGSENSTSKPEMS*TDKYSSSIFT PCTAHPGE* LMYLPVRLGLSGTPAVKATKLSSSEINS Subject 949 EERYLQVFTPNLQVLDLMKCASLGILIFWYGSENSTSKPEMS*TDKYSSSIFTLPCTAHPGE*GLMYLPVRLGLSGTPAVKATKLSSSEINS 1224
Range 10: 1284 to 1460 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
136.2 bits(291) | 0.0 | 56/59(95%) | 0/59(0%) | Plus/Minus |
Query 31 QRCKTSACPLGLGLLISKGLPH*RLNL*PHTAT*IQSCAQQRDLPPPCQNISAPPQHLE 207 QRCKTSACPLGLGLLISKGLPH*RLNL PHT T*IQSCAQQRDLPPPCQNISAP QHLE Subject 1284 QRCKTSACPLGLGLLISKGLPH*RLNLEPHTVT*IQSCAQQRDLPPPCQNISAPLQHLE 1460
Range 11: 690 to 842 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.4 bits(263) | 0.0 | 50/51(98%) | 0/51(0%) | Plus/Minus |
Query 649 NYS*YSNNAKYLRPNQPLQTGLKLSTSFYACS*PGTSHNCSVPPPPLLSSF 801 NYS*YSNNAKYLRPNQPLQTGLKLSTS YACS*PGTSHNCSVPPPPLLSSF Subject 690 NYS*YSNNAKYLRPNQPLQTGLKLSTSSYACS*PGTSHNCSVPPPPLLSSF 842
Grapevine rupestris stem pitting associated virus complete genome, genomic RNA, isolate GRSPaV MG
Sequence ID: FR691076.1 Length: 8749 Number of Matches: 11
Range 1: 6433 to 7206 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
605.4 bits(1315) | 0.0 | 253/258(98%) | 0/258(0%) | Minus/Plus |
Query 29 EMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKHYSPGCAVQGKVNILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAA 802 EMMTEEEVEAHYNCVRFLVRNKHKMRC ISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFP+VIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIK YSPGCAVQGKVNILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSP TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPED+HWFYIAA Subject 6433 EMMTEEEVEAHYNCVRFLVRNKHKMRCLISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPIVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKVNILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPLTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDKHWFYIAA 7206
Range 2: 6432 to 7205 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
566.0 bits(1229) | 0.0 | 242/258(94%) | 0/258(0%) | Minus/Plus |
Query 30 *NDDRRGGGGTLQLCEVPG*EQA*NEVLNFRPV*SG*LGLKYLALFEYYE*FS*SIVSLRVYRCFQCAQISSCYT*CAW*W*E*FNKGVNLRGREFRGFHSWCSRQS*PHREVHQALLTRMRSARESEYT**VLVCSRHFRF*CTVFRPVPEYQYSQRGAFH*VQDL*VWCEHLQIPFLFRFQS*QRRAGRRHCGIALHSRC*GGADMFWQGGGRSRCCAQL*IQVAV*G*RFNLQCGNPFEIKRPNPRGQALVLHRC 803 *+DDRRGGGGTLQLCEVPG*EQA*+EV NFRPV*SG*LGLKYLALFEYYE*FS*SI+SLRVYRCFQCA IS+CYT*CAW*W*E*FNKGVNLRGREFRGFHS CSRQS*PHREVHQALLTRMRSAR+SEYT**VLV SRHF F*CTVFRPVPEYQYSQRGAFH*VQDL*VWCEHLQIPFLFRFQS* RRAGRRHCGI HSRC* GADMFWQGGGRSRCC QL*IQVAV*G RFNLQCGNPFEIKRPNPRGQALVLHRC Subject 6432 *DDDRRGGGGTLQLCEVPG*EQA*DEVSNFRPV*SG*LGLKYLALFEYYE*FS*SIISLRVYRCFQCA*ISNCYT*CAW*W*E*FNKGVNLRGREFRGFHSRCSRQS*PHREVHQALLTRMRSARKSEYT**VLVRSRHFGF*CTVFRPVPEYQYSQRGAFH*VQDL*VWCEHLQIPFLFRFQS**RRAGRRHCGITPHSRC*RGADMFWQGGGRSRCCTQL*IQVAV*GSRFNLQCGNPFEIKRPNPRGQALVLHRC 7205
Range 3: 6436 to 7206 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
549.1 bits(1192) | 0.0 | 243/257(95%) | 0/257(0%) | Plus/Minus |
Query 29 GSDVKPVPVLWGWVS*FQKGYHIEG*TSNLTRQLEFRVVRNSEIYRLLAKTYQHPLNI*SEGRSHNDVVQPVAANFETERGKVFASVHTKPTSLGLNEMRLFGNTDILVRV*KQYIKT*NVLNRQVLIKYIHFPLHCASW*VMLDVPPCEVRTVWNTSCESHETLVL*D*LPYXXXXXXXXXXMYNNWKFEHTENTYKLEG*QCFN*IIHNTRTTPNT*GLINHFKQA*N*APHFMLVPNQEPHTIVVCLHLLFCHH 799 GSDVKPV VLWGWVS*FQKGYHIEG*TSNLTRQLEFRVV NSEIYRLLAKTYQHP NI*SEG SHNDVVQPVA NFETERGKVFASVHTKPTSLGLNEMRLFGNTDILVRV*KQYIKT NVLN QVLIKYIHF LHCASW*V LDVPPCEVRTVWNT CESHETLVL*D*LPY*TTLTTTRHTMYNNWKF+HTENTYKLEG* CFN*IIHNTRTTPNT*GLINHFKQA*N* PH MLVPNQEPHTIVVCLHLLFCHH Subject 6436 GSDVKPVLVLWGWVS*FQKGYHIEG*TSNLTRQLEFRVVCNSEIYRLLAKTYQHPFNI*SEG*SHNDVVQPVATNFETERGKVFASVHTKPTSLGLNEMRLFGNTDILVRV*KQYIKTRNVLNGQVLIKYIHFSLHCASW*VRLDVPPCEVRTVWNTCCESHETLVL*D*LPY*TTLTTTRHTMYNNWKFKHTENTYKLEG**CFN*IIHNTRTTPNT*GLINHFKQA*N*TPHLMLVPNQEPHTIVVCLHLLFCHH 7206
Range 4: 6620 to 6970 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
262.7 bits(567) | 0.0 | 112/117(96%) | 0/117(0%) | Plus/Minus |
Query 265 KRKGICKCSHQTYKSWT**NAPLWEY*YSGTGLKTVHQNLKCLEQTSTHQVYSLSLALRILVSNA*CTSL*G*DCLEHQL*KPRNSRPLRLTPLLNYSYHYQAHYV*QLEI*AH*KH 615 KRKGICKCSHQTYKSWT**NAPLWEY*YSGTGLKTVHQN KCLE+TSTHQVYSL LALRILVS A*CTSL*G*DCLEH L*KPRNSRPLRLTPLLNYSYHYQAHYV*QLEI*AH*KH Subject 6620 KRKGICKCSHQTYKSWT**NAPLWEY*YSGTGLKTVHQNPKCLERTSTHQVYSLFLALRILVSKA*CTSL*G*DCLEHLL*KPRNSRPLRLTPLLNYSYHYQAHYV*QLEI*AH*KH 6970
Range 5: 6432 to 6641 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
152.3 bits(326) | 0.0 | 69/70(99%) | 0/70(0%) | Plus/Minus |
Query 594 NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEIEHLILCLFLTRNLTQL*CASTSSSVIIS 803 NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEI HLILCLFLTRNLTQL*CASTSSSVIIS Subject 6432 NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEIRHLILCLFLTRNLTQL*CASTSSSVIIS 6641
Range 6: 7017 to 7205 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
142.7 bits(305) | 0.0 | 61/63(97%) | 0/63(0%) | Plus/Minus |
Query 30 AAM*NQCLSSGVGSLDFKRVTTLKVEPLTSHGNLNSELCATARSTASLPKHISTPSTSRVKGD 218 AAM*NQCLSSGVGSLDFKRVTTLKVEP TSHGNLNSELCATARSTASLPKHISTPSTSRV+GD Subject 7017 AAM*NQCLSSGVGSLDFKRVTTLKVEPRTSHGNLNSELCATARSTASLPKHISTPSTSRVRGD 7205
Range 7: 6434 to 7057 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
416.7 bits(903) | 0.0 | 194/208(93%) | 0/208(0%) | Minus/Plus |
Query 178 K**QKRRWRHTTIV*GSWLGTSIK*GAQFQACLKWLIRP*VFGVVRVL*II*LKHCQPSSL*VFSVCSNFQLLYIVCLXXXXXXX*GS*SQRTRVSWLSQLVFQTVLTSQGGTSSITHQDAQCKGK*IYLMSTCLFKTFQVLMYCFQTRTRISVFPKRRISLSPRLVGLV*TLANTFPLSVSKLAATGWTTSLWDRPSL*MLRGC*YV 801 +**QKRRWRHTTIV*GSWLGTSI+*G FQACLKWLIRP*VFGVVRVL*II*LKH QPSSL*VFSVC NFQLLYIVCLVVVRVV**GS*SQRTRVSWLSQ VFQTVLTSQGGTSS+THQDAQCK K*IYLMSTC FKTF+VLMYCFQTRTRISVFPKRRISLSPRLVGLV*TLANTFPLSVSKL ATGWTTSLWD PSL*ML+GC*YV Subject 6434 R**QKRRWRHTTIV*GSWLGTSIR*GV*FQACLKWLIRP*VFGVVRVL*II*LKHYQPSSL*VFSVCLNFQLLYIVCLVVVRVV**GS*SQRTRVSWLSQQVFQTVLTSQGGTSSLTHQDAQCKEK*IYLMSTCPFKTFRVLMYCFQTRTRISVFPKRRISLSPRLVGLV*TLANTFPLSVSKLVATGWTTSLWDHPSL*MLKGC*YV 7057
Range 8: 7100 to 7207 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
84.5 bits(178) | 0.0 | 34/36(94%) | 0/36(0%) | Minus/Plus |
Query 28 NSSCRVRLEVQPSMW*PF*NQETQPQRTGTGFTSLP 135 NSSCRVR EVQPSMW*PF*NQETQPQRT TGFTSLP Subject 7100 NSSCRVRFEVQPSMW*PF*NQETQPQRTSTGFTSLP 7207
Range 9: 6693 to 6968 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
213.2 bits(459) | 0.0 | 91/92(99%) | 0/92(0%) | Plus/Minus |
Query 267 EERYLQVFTPNLQVLDLMKCASLGILIFWYGSENSTSKPEMS*TDKYSSSIFTFPCTAHPGE*CLMYLPVRLGLSGTPAVKATKLSSSEINS 542 EERYLQVFTPNLQVLDLMKCASLGILIFWYGSENSTSKPEMS*TDKYSSSIFTFPCTAHPGE* LMYLPVRLGLSGTPAVKATKLSSSEINS Subject 6693 EERYLQVFTPNLQVLDLMKCASLGILIFWYGSENSTSKPEMS*TDKYSSSIFTFPCTAHPGE*GLMYLPVRLGLSGTPAVKATKLSSSEINS 6968
Range 10: 7028 to 7204 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
136.2 bits(291) | 0.0 | 56/59(95%) | 0/59(0%) | Plus/Minus |
Query 31 QRCKTSACPLGLGLLISKGLPH*RLNL*PHTAT*IQSCAQQRDLPPPCQNISAPPQHLE 207 QRCKTSACPLGLGLLISKGLPH*RLNL PHTAT*IQSC QQRDLPPPCQNISAP QHLE Subject 7028 QRCKTSACPLGLGLLISKGLPH*RLNLEPHTAT*IQSCVQQRDLPPPCQNISAPLQHLE 7204
Range 11: 6437 to 6586 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
118.8 bits(253) | 0.0 | 48/50(96%) | 0/50(0%) | Plus/Minus |
Query 649 NYS*YSNNAKYLRPNQPLQTGLKLSTSFYACS*PGTSHNCSVPPPPLLSS 798 NYS*YSNNAKYLRPNQPLQTGLKL TS YACS*PGTSHNCSVPPPPLLSS Subject 6437 NYS*YSNNAKYLRPNQPLQTGLKLDTSSYACS*PGTSHNCSVPPPPLLSS 6586
Grapevine rupestris stem pitting associated virus isolate SK704 C, complete genome
Sequence ID: KX274276.1 Length: 8726 Number of Matches: 11
Range 1: 6434 to 7207 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
600.4 bits(1304) | 0.0 | 250/258(97%) | 0/258(0%) | Minus/Plus |
Query 29 EMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKHYSPGCAVQGKVNILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAA 802 EMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFE VD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDE+FVAFTAGVPDSPNLTGRYIK YSPGC VQGKVNILDEYLSVQDISGFDVLFSDPYQN SIPKEAHFIKSKTCRFG NTCKYLSSFGFKVSSDGLD+VIVGSPFTLDVEGVLICFGKEAVDLAVAHNS+FKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAA Subject 6434 EMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFVAFTAGVPDSPNLTGRYIKAYSPGCVVQGKVNILDEYLSVQDISGFDVLFSDPYQNTSIPKEAHFIKSKTCRFGANTCKYLSSFGFKVSSDGLDEVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAA 7207
Range 2: 6433 to 7206 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
512.0 bits(1111) | 0.0 | 219/258(85%) | 0/258(0%) | Minus/Plus |
Query 30 *NDDRRGGGGTLQLCEVPG*EQA*NEVLNFRPV*SG*LGLKYLALFEYYE*FS*SIVSLRVYRCFQCAQISSCYT*CAW*W*E*FNKGVNLRGREFRGFHSWCSRQS*PHREVHQALLTRMRSARESEYT**VLVCSRHFRF*CTVFRPVPEYQYSQRGAFH*VQDL*VWCEHLQIPFLFRFQS*QRRAGRRHCGIALHSRC*GGADMFWQGGGRSRCCAQL*IQVAV*G*RFNLQCGNPFEIKRPNPRGQALVLHRC 803 *NDDR GGGTLQLCEVP EQA*NEVLNFRP+*S *LGLKYLALFEYYE*FS*SI+S VYRCFQCAQISSCYT*CAW W*E*FNKGVNLRGREFRGFH CSRQS* HR+VHQ LL+RMRSA E EYT**V V SRHF F*CTVFR VPEYQYSQRGAFH*VQDL VWC+HLQIPFLFRFQS*QRR GR + G+ LHSRC*GGADM WQGGGR RCCAQL* QVAV* RFN QCGNP EIK PNPRGQ LVLHRC Subject 6433 *NDDRGRGGGTLQLCEVPSEEQA*NEVLNFRPI*SS*LGLKYLALFEYYE*FS*SIISF*VYRCFQCAQISSCYT*CAWQW*E*FNKGVNLRGREFRGFHGRCSRQS*SHRKVHQGLLSRMRSAGEGEYT**VFVRSRHFGF*CTVFRSVPEYQYSQRGAFH*VQDLQVWCKHLQIPFLFRFQS*QRRVGRSYRGVTLHSRC*GGADMLWQGGGRPRCCAQL*FQVAV*SSRFNFQCGNPLEIKGPNPRGQTLVLHRC 7206
Range 3: 6434 to 7207 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
486.3 bits(1055) | 0.0 | 218/258(84%) | 0/258(0%) | Plus/Minus |
Query 29 GSDVKPVPVLWGWVS*FQKGYHIEG*TSNLTRQLEFRVVRNSEIYRLLAKTYQHPLNI*SEGRSHNDVVQPVAANFETERGKVFASVHTKPTSLGLNEMRLFGNTDILVRV*KQYIKT*NVLNRQVLIKYIHFPLHCASW*VMLDVPPCEVRTVWNTSCESHETLVL*D*LPYXXXXXXXXXXMYNNWKFEHTENTYKLEG*QCFN*IIHNTRTTPNT*GLINHFKQA*N*APHFMLVPNQEPHTIVVCLHLLFCHHF 802 GSDVKPV VLWGWV *FQ+GYHIE *TSN TRQLE RVVRNSE+YRLLAK YQHPLNI*SEG H++ VQPVAANFETERGKVFASV TKP LGLNEMRLFGNT ILVR+*KQYIKT NVLN Q+LIKYIH PLH ASW V LDVP CE+RTVWNT ESHE LVL*D*LPY*TTLTT RHTMYNNWKFEHTENTYKL+ * CFN*IIHNTRTTPNT*GLIN FK A*N*APHFMLVP+ EPHTIVVCLHL CHHF Subject 6434 GSDVKPVSVLWGWVP*FQEGYHIES*TSNFTRQLEIRVVRNSEVYRLLAKAYQHPLNI*SEG*PHDNFVQPVAANFETERGKVFASVCTKPAGLGLNEMRLFGNTGILVRI*KQYIKTRNVLNGQILIKYIHLPLHYASWRVSLDVPSCEIRTVWNTCRESHEILVL*D*LPY*TTLTTARHTMYNNWKFEHTENTYKLKS**CFN*IIHNTRTTPNT*GLINCFK*A*N*APHFMLVPH*EPHTIVVCLHLFLCHHF 7207
Range 4: 6621 to 6971 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
225.6 bits(486) | 0.0 | 99/117(85%) | 0/117(0%) | Plus/Minus |
Query 265 KRKGICKCSHQTYKSWT**NAPLWEY*YSGTGLKTVHQNLKCLEQTSTHQVYSLSLALRILVSNA*CTSL*G*DCLEHQL*KPRNSRPLRLTPLLNYSYHYQAHYV*QLEI*AH*KH 615 KRKGICKC HQT +SWT**NAPLWEY YSGT LKTVHQN KCLE+T+THQVYS S ALRIL S *CT L* *DCLEH *KPRNSRPLRLTPLLNYSYH QAHYV*QLEI*AH*KH Subject 6621 KRKGICKCLHQTCRSWT**NAPLWEYWYSGTDLKTVHQNPKCLERTNTHQVYSPSPALRILESKP*CTFL*D*DCLEHLP*KPRNSRPLRLTPLLNYSYHCQAHYV*QLEI*AH*KH 6971
Range 5: 6433 to 6642 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
152.3 bits(326) | 0.0 | 69/70(99%) | 0/70(0%) | Plus/Minus |
Query 594 NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEIEHLILCLFLTRNLTQL*CASTSSSVIIS 803 NLSTLKTPINSKADNALTKLFIILEQRQILKA*ST SNRPEIEHLILCLFLTRNLTQL*CASTSSSVIIS Subject 6433 NLSTLKTPINSKADNALTKLFIILEQRQILKA*STASNRPEIEHLILCLFLTRNLTQL*CASTSSSVIIS 6642
Range 6: 7018 to 7206 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
141.3 bits(302) | 0.0 | 61/63(97%) | 0/63(0%) | Plus/Minus |
Query 30 AAM*NQCLSSGVGSLDFKRVTTLKVEPLTSHGNLNSELCATARSTASLPKHISTPSTSRVKGD 218 AAM*NQCLSSGVGSLDFKRVTTLKVEP TSHGNL SELCATARSTASLPKHISTPSTSRVKGD Subject 7018 AAM*NQCLSSGVGSLDFKRVTTLKVEPRTSHGNLKSELCATARSTASLPKHISTPSTSRVKGD 7206
Range 7: 6435 to 7055 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
352.1 bits(762) | 0.0 | 173/207(84%) | 0/207(0%) | Minus/Plus |
Query 181 K**QKRRWRHTTIV*GSWLGTSIK*GAQFQACLKWLIRP*VFGVVRVL*II*LKHCQPSSL*VFSVCSNFQLLYIVCLXXXXXXX*GS*SQRTRVSWLSQLVFQTVLTSQGGTSSITHQDAQCKGK*IYLMSTCLFKTFQVLMYCFQTRTRISVFPKRRISLSPRLVGLV*TLANTFPLSVSKLAATGWTTSLWDRPSL*MLRGC*Y 801 K**Q++RWRHTTIV*GS GTSIK*GAQFQA LK LIRP*VFGVVRVL*II*LKH Q SL*VFSVCSNFQLLYIVCL VVRVV**GS*SQRTR+SWLS+ VFQTVL SQ GTS +T QDA C+G+*IYLMS C FKTF+VLMYCFQ RTRI VFPKRRISLSPR GLV TLANTFPLSVSKLAATGWT W PSL*MLRGC*Y Subject 6435 K**QRKRWRHTTIV*GS**GTSIK*GAQFQAYLKQLIRP*VFGVVRVL*II*LKHYQLLSL*VFSVCSNFQLLYIVCLAVVRVV**GS*SQRTRISWLSRQVFQTVLISQEGTSRLTLQDA*CRGR*IYLMSICPFKTFRVLMYCFQIRTRIPVFPKRRISLSPRPAGLVQTLANTFPLSVSKLAATGWTKLSWGHPSL*MLRGC*Y 7055
Range 8: 7104 to 7208 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
68.4 bits(143) | 0.0 | 29/35(83%) | 0/35(0%) | Minus/Plus |
Query 28 SSCRVRLEVQPSMW*PF*NQETQPQRTGTGFTSLP 132 SSCRV+ EVQ SMW*P *NQ TQPQRT TGFTSLP Subject 7104 SSCRVKFEVQLSMW*PS*NQGTQPQRTDTGFTSLP 7208
Range 9: 6694 to 6969 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
208.2 bits(448) | 0.0 | 87/92(95%) | 0/92(0%) | Plus/Minus |
Query 267 EERYLQVFTPNLQVLDLMKCASLGILIFWYGSENSTSKPEMS*TDKYSSSIFTFPCTAHPGE*CLMYLPVRLGLSGTPAVKATKLSSSEINS 542 EERYLQVF PNLQVLDLMKCASLGIL+FWYGSENSTSKPEMS*TDKYSSSIFTFPCT HPGE* LMYLPVRLGLSGTPAVKATK SSSEINS Subject 6694 EERYLQVFAPNLQVLDLMKCASLGILVFWYGSENSTSKPEMS*TDKYSSSIFTFPCTTHPGE*ALMYLPVRLGLSGTPAVKATKFSSSEINS 6969
Range 10: 7029 to 7205 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
121.6 bits(259) | 0.0 | 50/59(85%) | 0/59(0%) | Plus/Minus |
Query 31 QRCKTSACPLGLGLLISKGLPH*RLNL*PHTAT*IQSCAQQRDLPPPCQNISAPPQHLE 207 QRCKTS CPLGLG LIS+GLPH*+LNL HTAT* QSCAQQR LPPPCQ+ISAPPQHLE Subject 7029 QRCKTSVCPLGLGPLISRGLPH*KLNLELHTAT*NQSCAQQRGLPPPCQSISAPPQHLE 7205
Range 11: 6435 to 6587 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
105.1 bits(223) | 0.0 | 45/51(88%) | 0/51(0%) | Plus/Minus |
Query 649 NYS*YSNNAKYLRPNQPLQTGLKLSTSFYACS*PGTSHNCSVPPPPLLSSF 801 NYS*YSNNAKYLRPNQ LQ GLKLSTSFYACS GTSHNCSVPPP LSSF Subject 6435 NYS*YSNNAKYLRPNQLLQIGLKLSTSFYACSSLGTSHNCSVPPPLPLSSF 6587
Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome
Sequence ID: JX559646.1 Length: 8726 Number of Matches: 11
Range 1: 6433 to 7206 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
592.2 bits(1286) | 0.0 | 247/258(96%) | 0/258(0%) | Minus/Plus |
Query 29 EMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKHYSPGCAVQGKVNILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAA 802 EMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFE VD*ALSIW C SIMNNLVKALS FEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIK YSPGCAVQGKVNILDEYLSVQDISGFDVL SDPYQN SIPKEAHFIKSKTCRFG NTCKYLSSFGFKVSS+GLD+VIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPED+HWFYIAA Subject 6433 EMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAVD*ALSIWHCLSIMNNLVKALSTFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKVNILDEYLSVQDISGFDVLLSDPYQNTSIPKEAHFIKSKTCRFGANTCKYLSSFGFKVSSEGLDEVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDKHWFYIAA 7206
Range 2: 6435 to 7205 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
517.9 bits(1124) | 0.0 | 221/257(86%) | 0/257(0%) | Minus/Plus |
Query 30 NDDRRGGGGTLQLCEVPG*EQA*NEVLNFRPV*SG*LGLKYLALFEYYE*FS*SIVSLRVYRCFQCAQISSCYT*CAW*W*E*FNKGVNLRGREFRGFHSWCSRQS*PHREVHQALLTRMRSARESEYT**VLVCSRHFRF*CTVFRPVPEYQYSQRGAFH*VQDL*VWCEHLQIPFLFRFQS*QRRAGRRHCGIALHSRC*GGADMFWQGGGRSRCCAQL*IQVAV*G*RFNLQCGNPFEIKRPNPRGQALVLHRC 800 NDDR GGGGTLQLCEVP *EQA*+EVLNFRP+*SG*LGLKYLALFEYYE*F *SIV+LR+YRCFQCA ISS YT*C W W*E*FNKGVNLRGREFRGFHS CSR S*PHR+VHQALL+RMRSARESEYT**V V R+FR *CT FRPVP+YQYSQRGAFH VQDL*+WCEHLQIP LFRFQS*QRR GR +CG+ALHSRC* GA+MFWQGGGRSRCCAQL*IQVAV* RFNLQCGNPFEIKR NPR QALVLH C Subject 6435 NDDRGGGGGTLQLCEVPS*EQA*DEVLNFRPI*SG*LGLKYLALFEYYE*FG*SIVNLRIYRCFQCA*ISSRYT*CTWQW*E*FNKGVNLRGREFRGFHSRCSR*S*PHRKVHQALLSRMRSARESEYT**VFVRPRYFRL*CTAFRPVPKYQYSQRGAFHKVQDL*IWCEHLQIPLLFRFQS*QRRIGRSYCGVALHSRC*RGANMFWQGGGRSRCCAQL*IQVAV*SSRFNLQCGNPFEIKRSNPRRQALVLHCC 7205
Range 3: 6433 to 7206 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
494.6 bits(1073) | 0.0 | 217/258(84%) | 0/258(0%) | Plus/Minus |
Query 29 GSDVKPVPVLWGWVS*FQKGYHIEG*TSNLTRQLEFRVVRNSEIYRLLAKTYQHPLNI*SEGRSHNDVVQPVAANFETERGKVFASVHTKPTSLGLNEMRLFGNTDILVRV*KQYIKT*NVLNRQVLIKYIHFPLHCASW*VMLDVPPCEVRTVWNTSCESHETLVL*D*LPYXXXXXXXXXXMYNNWKFEHTENTYKLEG*QCFN*IIHNTRTTPNT*GLINHFKQA*N*APHFMLVPNQEPHTIVVCLHLLFCHHF 802 GS+VKPV V WGW+S*FQKGYHIEG*TSN TRQLEFRVVRNSEIYRLLAKTY HP NI*SEGR HN+ VQ AANFETERG+VFASV TK T LGL EMRLFGNT ILVRV*KQYIK *N+L+ Q+LIKYIHFPLHCASW V LDVP CEVRT+WNT CESHETLVL*D*LPY*TTLTT R+TMYN+WKF+HTENTYK EG*QCFN IIHNT+T PNT*GLIN FK A*N*APH MLVPN EPHTIVVCLHLL CHHF Subject 6433 GSNVKPVLVFWGWIS*FQKGYHIEG*TSNFTRQLEFRVVRNSEIYRLLAKTY*HPFNI*SEGRPHNNFVQSFAANFETERGEVFASVRTKSTGLGLYEMRLFGNTGILVRV*KQYIKA*NILDGQILIKYIHFPLHCASWRVRLDVPSCEVRTIWNTCCESHETLVL*D*LPY*TTLTTARYTMYNDWKFKHTENTYKFEG*QCFNQIIHNTQTMPNT*GLINRFK*A*N*APHLMLVPN*EPHTIVVCLHLLLCHHF 7206
Range 4: 6620 to 6970 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
223.3 bits(481) | 0.0 | 97/117(83%) | 0/117(0%) | Plus/Minus |
Query 265 KRKGICKCSHQTYKSWT**NAPLWEY*YSGTGLKTVHQNLKCLEQTSTHQVYSLSLALRILVSNA*CTSL*G*DCLEHQL*KPRNSRPLRLTPLLNYSYHYQAHYV*QLEI*AH*KH 615 KR+GICKCSHQ Y+SWT *NAPLWEY Y GTGLK VHQ+LK L +T+THQVYSLSLALRIL S A*CT L*G*D LEH L*KPRNSRPLRLTPLLNYSYH Q HYV*+LEI*AH*KH Subject 6620 KRRGICKCSHQIYRSWTL*NAPLWEYWYFGTGLKAVHQSLKYLGRTNTHQVYSLSLALRILESKA*CTFL*G*DYLEHLL*KPRNSRPLRLTPLLNYSYHCQVHYV*RLEI*AH*KH 6970
Range 5: 6432 to 6641 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.9 bits(310) | 0.0 | 66/70(94%) | 0/70(0%) | Plus/Minus |
Query 594 NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEIEHLILCLFLTRNLTQL*CASTSSSVIIS 803 NLSTLKTPINSK DNALTKLFIIL+Q QILKA*ST SNRPEIEHLILCLFLTRNLTQL*CASTSSSVIIS Subject 6432 NLSTLKTPINSKVDNALTKLFIILKQCQILKA*STASNRPEIEHLILCLFLTRNLTQL*CASTSSSVIIS 6641
Range 6: 7017 to 7205 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.0 bits(308) | 0.0 | 62/63(98%) | 0/63(0%) | Plus/Minus |
Query 30 AAM*NQCLSSGVGSLDFKRVTTLKVEPLTSHGNLNSELCATARSTASLPKHISTPSTSRVKGD 218 AAM*NQCLSSGVGSLDFKRVTTLKVEP TSHGNLNSELCATARSTASLPKHISTPSTSRVKGD Subject 7017 AAM*NQCLSSGVGSLDFKRVTTLKVEPRTSHGNLNSELCATARSTASLPKHISTPSTSRVKGD 7205
Range 7: 6434 to 7057 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
346.1 bits(749) | 0.0 | 172/208(83%) | 0/208(0%) | Minus/Plus |
Query 178 K**QKRRWRHTTIV*GSWLGTSIK*GAQFQACLKWLIRP*VFGVVRVL*II*LKHCQPSSL*VFSVCSNFQLLYIVCLXXXXXXX*GS*SQRTRVSWLSQLVFQTVLTSQGGTSSITHQDAQCKGK*IYLMSTCLFKTFQVLMYCFQTRTRISVFPKRRISLSPRLVGLV*TLANTFPLSVSKLAATGWTTSLWDRPSL*MLRGC*YV 801 K**Q+RRWRHTTIV*GS LGTSI+*GAQFQA LK LIRP*VFG+V VL*II LKHCQPS+L*VFSVC NFQ LYIV L VVRVV**GS*SQRTRVSWLSQ VFQ VLTSQ GTSS+T QDAQCKGK*IYLMS C K FQ LMYCFQTRT+I VFPKRRIS SPR V LV TLANT PLSVSKLAA WT LW RPSL*ML+GC*YV Subject 6434 K**QRRRWRHTTIV*GS*LGTSIR*GAQFQAYLKRLIRP*VFGIV*VL*IIWLKHCQPSNL*VFSVCLNFQSLYIVYLAVVRVV**GS*SQRTRVSWLSQQVFQIVLTSQEGTSSLTLQDAQCKGK*IYLMSICPSKIFQALMYCFQTRTKIPVFPKRRIS*SPRPVDLVRTLANTSPLSVSKLAAKDWTKLLWGRPSL*MLKGC*YV 7057
Range 8: 7100 to 7207 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
76.2 bits(160) | 0.0 | 30/36(83%) | 0/36(0%) | Minus/Plus |
Query 28 NSSCRVRLEVQPSMW*PF*NQETQPQRTGTGFTSLP 135 NSSCRV+ EVQPSMW*PF*NQE QPQ+T TGFT LP Subject 7100 NSSCRVKFEVQPSMW*PF*NQEIQPQKTSTGFTLLP 7207
Range 9: 6693 to 6968 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
202.2 bits(435) | 0.0 | 85/92(92%) | 0/92(0%) | Plus/Minus |
Query 267 EERYLQVFTPNLQVLDLMKCASLGILIFWYGSENSTSKPEMS*TDKYSSSIFTFPCTAHPGE*CLMYLPVRLGLSGTPAVKATKLSSSEINS 542 EERYLQVF PNLQVLD MKCASLGIL+FWYGSE+STSKPE+S TDKYSSSIFTFPCTAHPGE* LMYLPVRLGLSGTPAVKATKLSSSEINS Subject 6693 EERYLQVFAPNLQVLDFMKCASLGILVFWYGSESSTSKPEISWTDKYSSSIFTFPCTAHPGE*GLMYLPVRLGLSGTPAVKATKLSSSEINS 6968
Range 10: 7028 to 7204 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
121.1 bits(258) | 0.0 | 52/59(88%) | 0/59(0%) | Plus/Minus |
Query 31 QRCKTSACPLGLGLLISKGLPH*RLNL*PHTAT*IQSCAQQRDLPPPCQNISAPPQHLE 207 Q+CKTSAC LGL LLISKGLPH*RLNL HTAT*IQSCAQQRDLPPPCQNI AP QHLE Subject 7028 QQCKTSACLLGLDLLISKGLPH*RLNLELHTAT*IQSCAQQRDLPPPCQNILAPLQHLE 7204
Range 11: 6434 to 6586 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.9 bits(240) | 0.0 | 47/51(92%) | 0/51(0%) | Plus/Minus |
Query 649 NYS*YSNNAKYLRPNQPLQTGLKLSTSFYACS*PGTSHNCSVPPPPLLSSF 801 NYS*YSNNAKYLRPNQPLQ GLKLSTS YACS* GTSHNCSVPPPP LSSF Subject 6434 NYS*YSNNAKYLRPNQPLQIGLKLSTSSYACS*LGTSHNCSVPPPPPLSSF 6586
Nucleotide Sequence (2000 letters)
Query ID: | ds2016-132_4 |
Query definition: | No definition line |
Query length: | 951 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
1555.3 | 8471.7 | 21% | 0 | 92% | KR054734.1 | |
1521.0 | 7004.2 | 35% | 0 | 69% | KT948710.1 | |
1517.7 | 6993.6 | 34% | 0 | 73% | KX958435.1 | |
1517.7 | 6938.2 | 34% | 0 | 72% | KX274274.1 | |
1472.4 | 5862.1 | 35% | 0 | 58% | AY368172.2 |
Alignments
Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome
Sequence ID: KR054734.1 Length: 8753 Number of Matches: 8
Range 1: 2965 to 4935 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1555.3 bits(3388) | 0.0 | 651/657(99%) | 0/657(0%) | Minus/Plus |
Query 1 VSKLLDVPRSKKQSIIVLEGALAIDTSYGPKVLGSFEVFKGDFNIKKIEDGSIFVISYKAPVRSSGKLRVHKTECSFSGSKEVLLGCQIEASADYDIDDFNKFPVPGDGNCFWHSVGFLLSTDGLALKAGISSFVESESLVDPSLSAQTVLRQLSDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPGGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRRVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSDIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKIANLKAGHCVIFDEVQLFPPGYIDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKYGGVLISHDSFHTDDRRWMTALSRFSHNLDLVNITGISVE 1971 +SKLLDVPRSKKQSIIVLEGALAIDTSYGPKVLGSFE+FKGDFNIKKIEDGSIFVISYKAPVRSSGKLRVHKTECSFSGSKEVLLGCQIEASADYDIDDFNKFPVPGDGNCFWHSVGFLLSTDGLALKAGI SFVESESLVDPSLSAQTVLRQLSDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPGGRMSALFDITNEHIRHVEKIGNGPQSIKVDELR+VKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSDIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKIANLKAGHCVIFDEVQLFPPGYIDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFK+GGVLISHDSFHTDDRRW+TALSRFSHNLDLVNITGISVE Subject 2965 LSKLLDVPRSKKQSIIVLEGALAIDTSYGPKVLGSFELFKGDFNIKKIEDGSIFVISYKAPVRSSGKLRVHKTECSFSGSKEVLLGCQIEASADYDIDDFNKFPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESLVDPSLSAQTVLRQLSDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPGGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSDIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKIANLKAGHCVIFDEVQLFPPGYIDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGVLISHDSFHTDDRRWLTALSRFSHNLDLVNITGISVE 4935
Range 2: 2971 to 4935 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1426.5 bits(3107) | 0.0 | 616/655(94%) | 0/655(0%) | Plus/Minus |
Query 1 FHADASNVYQVQVVAKAR*GRHPSTVISVE*VM*N*NSTIFEV*PC*FAKS*CELLHAKVRLHNLLLLKA*NQNRI*GGLRPSQKEVMHVVEDGIISECCSHGALLEMTWQSGLKHWIHKPPTLNVVPVGLTLK*SQYITLLSPQYCAILLGVICALTGITSK*NESITSYGQQTKVNIAWREQLNLIKNDAMACLQVCNFPKKHFKGHNVPTFFF*FTSLCHFATIIHFQVSFN*IG*SPSG*NKGYEFAFRPLHKALVQKAFTSSKGAKHDCQLSRFDIRS*YS*EPWLGIVKLLITYHTS*AS*QTPLQLFSPFKTWKVSYL*SIH*KEVKSRSFHSSQLIHLYTLRAVANLLNMSYMFVGYVK*S*HAPARIDDLNLPIDITLSTNVKCFESLSEIHHV*ATTLTQLFKYVICGGPAQIVKNIHFTSTKRRGDSCDHAAIQWSTRLKMI*LQA*DSTQRPLAISKLPTHLIFWGDND*PHMMPNAE*GYHFVLCISIITELPQNGLG*QRWIYKRFTFNERTYACFQSKPICTQQETH*MPKTVTITRYREFVKVINVIISRGFDLTTEQHFLGSRKRALRLVNSQLARRSHRSLVRYHEYGTIFNLLNVKVPFEHLERSQNLWSITGVDRKRAFKNYY*LLLTPRHI*QL 1965 FHADASNV+QVQVVAKAR*GR P TVISVE*VM*N N T+FEV*PC*FAKS*CELLHAKVRLHNLLLLKA*NQNRI*GGLRPSQKEVMHVVED IIS+CCSHGALLEMTWQSGLKHWIHKPPTLNVVPVGLTLK*SQYITLLS QYCAILLGVICALTGITSK NESITSYG QTKVNIAWREQLNLIKNDAMACLQVCNFPKKHFKGHNVPTFFF*F SLCHFATIIHFQVSFN*I *SPSG*NKGYEFAFRPLHKALVQKAFTSSKGAKHDCQLSRFDIRS*YS*EPWLGIVKLLITYHTS*A *QTPLQLFSPFKTWKVSYL*SIH*KEVKSRSFH SQLIHLY LRAVANLLNMS M VGYVK*S*HAPAR+DDLNLPIDITLS NVKCFES SEIHHV TTLTQLFKYVICGGPAQ+VKNIHFTST+RRGDSCDHAAI W TRLKMI*LQA*DSTQRPLAISKLPTHLIFWG+ND PHMMPNA+*GYHFVLCISIITELPQNGLG*QRWIYKRFTFNERTYACFQSKPICTQQETH*MPKTVTITRYREFVKVI+VIISRGFDLTT HFLG RK ALRLVNSQLARRSHRSLVRYHEYG IFN LNVKVPFE L+RSQNLWSITGVDRKRAFKNYY*LLLTPRHI*QL Subject 2971 FHADASNVHQVQVVAKAR*GRQPPTVISVE*VM*NQNPTMFEV*PC*FAKS*CELLHAKVRLHNLLLLKA*NQNRI*GGLRPSQKEVMHVVEDCIISKCCSHGALLEMTWQSGLKHWIHKPPTLNVVPVGLTLK*SQYITLLSSQYCAILLGVICALTGITSKRNESITSYG*QTKVNIAWREQLNLIKNDAMACLQVCNFPKKHFKGHNVPTFFF*FASLCHFATIIHFQVSFN*IC*SPSG*NKGYEFAFRPLHKALVQKAFTSSKGAKHDCQLSRFDIRS*YS*EPWLGIVKLLITYHTS*AP*QTPLQLFSPFKTWKVSYL*SIH*KEVKSRSFHFSQLIHLYALRAVANLLNMSNMLVGYVK*S*HAPARVDDLNLPIDITLSANVKCFESFSEIHHVQTTTLTQLFKYVICGGPAQVVKNIHFTSTERRGDSCDHAAI*WGTRLKMI*LQA*DSTQRPLAISKLPTHLIFWGNNDQPHMMPNAK*GYHFVLCISIITELPQNGLG*QRWIYKRFTFNERTYACFQSKPICTQQETH*MPKTVTITRYREFVKVIDVIISRGFDLTT**HFLGPRKGALRLVNSQLARRSHRSLVRYHEYGAIFNFLNVKVPFEQLKRSQNLWSITGVDRKRAFKNYY*LLLTPRHI*QL 4935
Range 3: 2966 to 4933 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1400.4 bits(3050) | 0.0 | 616/656(94%) | 0/656(0%) | Plus/Minus |
Query 3 PR*CQ*CLPSPSCG*SAIGPSSIYGHQCGMSHVKLKLHHI*SLTLLIRQKLV*VASCQSKTAXXXXXXXXXXXXXXRRS*TEPKGSHACCGRWHNQRMLQSWSPS*NDMAVWTQTLDSQTSDSQCCTCRTYPQVISIYHSAQPPVLRDPFGSHMCFDRDHQQVK*KHHFVWSTDKGQYSLEGTVEPHQK*RNGLPSGLQFS*ETLQRSQRPNLLFLIYQPLPLCNYHPFPSLF*LNWLEPFWVKQRLRICLQTSS*SSCTESFYQLQRCQARLSTLEI*YQKLIFLRAMAWNR*TXXXXXXXXXXXANTPAAFQPFQNLESKLSLIHSLKGGQEQIVSLFSAHPPLYSAGRCQSSQHVLYVRWLCQIELTCARQD**PQSPH*YHT*HKCQMLRKPQRDTSCLSHHLDTALQICDLWRACTDS*EHPLHVYQAQRR*L*SCSHSMEHKVENDLTASIRFHTEATRYLQTSNSPHILG***LASHDA*CRIRLSFRSLHKHYH*AASKRFGLTKMDLQEIHFQRKNLCLLSKQAHLYSTRNPLNAKNSYHHQVQGIC*SHQCHNQQRLRFDNRAALPWIQKKSTPSCELSTCQKISQEPCKISRIWNHLQSS*C*SPL*TPRKIPKPLVHNWCRSQARLQELLLIASYS*AHLATLI 1970 PR*CQ*C PSPSCG*SAIGPS+ YGHQCGMSHVK K HH+*SLTLLIRQKLV*VASCQSKTAQSSSPQSLKPKSHLRRS*TEP+GSHACCGR HNQ+MLQSWSPS*NDMAVWTQTLDSQTSDSQCCTCRTYPQVISIYHSAQ PVLRDPFGSHMCFDRDHQQ K*KHHFVW TDKGQYSLEGTVEPHQK*RNGLPSGLQFS*ETLQRSQRPNLLFLI QPLPLCNYHPFPSLF*LN LEPFWVKQRLRICLQTSS*SSCTESFYQLQRCQARLSTLEI*YQKLIFLRAMAWNR*TSHHLSHQLS LANTPAAFQPFQNLESKLSLIHSLKGGQEQIVSLFSAHPPL SAGRCQSSQHV Y RWLCQIELTCARQ **PQSPH*YHT* KCQMLRK QRDTSC +HHLDTALQICDLWRACT S*EHPLHVY+AQRR*L*SCSH M HKVENDLTASIRFHTEATRYLQTSNSPHILG*** ASHDA*C+IRLSFRSLHKHYH*AASKRFGLTKMDLQEIHFQRKN+CLLSKQAHLYSTRNPLNAKNSYHHQVQGIC*SH+CHNQQRLRFDN ALPW QK+STPSCELSTCQKISQEPCKISRIW+HLQ S*C*SPL*T +KIPKPLVHNWCRSQARLQELLLIASYS*AHLAT I Subject 2966 PR*CQ*CSPSPSCG*SAIGPSTTYGHQCGMSHVKSKPHHV*SLTLLIRQKLV*VASCQSKTAQSSSPQSLKPKSHLRRS*TEPEGSHACCGRLHNQQMLQSWSPS*NDMAVWTQTLDSQTSDSQCCTCRTYPQVISIYHSAQLPVLRDPFGSHMCFDRDHQQEK*KHHFVWLTDKGQYSLEGTVEPHQK*RNGLPSGLQFS*ETLQRSQRPNLLFLICQPLPLCNYHPFPSLF*LNLLEPFWVKQRLRICLQTSS*SSCTESFYQLQRCQARLSTLEI*YQKLIFLRAMAWNR*TSHHLSHQLSPLANTPAAFQPFQNLESKLSLIHSLKGGQEQIVSLFSAHPPLCSAGRCQSSQHV*YARWLCQIELTCARQG**PQSPH*YHT*RKCQMLRKLQRDTSCSNHHLDTALQICDLWRACTGS*EHPLHVYRAQRR*L*SCSHLMGHKVENDLTASIRFHTEATRYLQTSNSPHILG***SASHDA*CKIRLSFRSLHKHYH*AASKRFGLTKMDLQEIHFQRKNVCLLSKQAHLYSTRNPLNAKNSYHHQVQGIC*SHRCHNQQRLRFDNLVALPWTQKRSTPSCELSTCQKISQEPCKISRIWSHLQFS*C*SPL*TTQKIPKPLVHNWCRSQARLQELLLIASYS*AHLATWI 4933
Range 4: 2963 to 4885 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1287.3 bits(2803) | 0.0 | 607/641(95%) | 0/641(0%) | Minus/Plus |
Query 51 LYQSC*MCLGVRSNQ**FLKARLRSTPVMDQRFWDLSRCSKGTLTLRRLKMVPYS*YXXXXXXXXLAS*EFTRRSALFLDPRKCCSVVKSKPLLIMTLMTLTNSLYLVMVTVFGIQWVSC*VQMGLL*KQA*VLSLKVNLL*IHLCQPKPF*GSSVIMLMQRTK**PYSALGIM*G*SLSPQNMR*VGSLEIASGLCVESYACSQIIFNLVLH*MAA*SQLSPLRLVDVKWMFLTICAGPPQITYLKSCVKVVA*T*CISLRLSKHLTFVLSVISMGRLRSSILAGACQLYLT*PTNI*DMXXXXXXXXXXXRWMS*EE*NDLLLTSFQ*MDQR*LTFQVLKGLKSCRGVC*EA*LV**VMRSLTIPSHGSQEYQLLISNLES*QSCLAPLELVKAFCTRAL*RGLKANS*PLFHPEGL*PIQLKETWKWMIVAKWQRLVNQKKKVGTL*PLKCFLGKLQT*RQAIASFLMRFNCSLQAILTFVC*PYEVMLSFHLLVIPVKAHMTPKRIAQYWGLSRVIY*DYLRVSPTGTTLRVGGL*IQCLSPDCHVISRRAP*LQHSLIMPSSTTCMTSFWLGLRPP*MRFWFQALRRRRLCSLTLA*SNSH*LLANQQG*TSNMVEF*FHMTHSTLMTVDG*RPYR 1973 +Y SC*MCLGVRSNQ**FLKARLRSTPVMDQRFWDL CSKGTLTLR+LKM PYS*YLTRLL*DLLAS*EFTRRSA FL PRKC VVKSKPLLIMT MTLTNSLYLVMVTVFGIQWVSC*VQMGLL*KQA VLSLKVNLL*IHLCQPKPF*GSSVIMLMQRTK**PY ALGIM*G*SL PQNMR*VGSLEIASGLCVESYACSQIIFNLV H*MAA*SQLSPLR VDVKWMFLT CAGPPQITYLKSCVKVV *T*CISL+LSKHLTF LSVISMGRLRSS LAGACQLYLT*PT+I DMLRRLATARR *RWMS*E+*NDLLLTSFQ*MDQR*LTFQVLKGLKSCRGVC* A*LV**VMRSLTIPSHGSQEYQLLISNLES*QSCLAPLELVKAFCTRAL*RGLKANS*PLFHPEGL* IQLKETWKWMIVAKWQRL NQKKKVGTL*PLKCFLGKLQT*RQAIASFLMRFNCSLQAILTFVC*PYEVMLSF LLVIPVKAHMTPKRIAQYW LSRVIY*DYLRVSPTGTTLRVGGL*IQCLSPDCHVISRRAP*LQH LIM SSTTCMTSFWLGLRPP*MRFWFQALRRRRLCSLTLA*SNSH*LLANQQG*TSNMV F*FHMTHSTLMTV G*RPYR Subject 2963 VYPSC*MCLGVRSNQ**FLKARLRSTPVMDQRFWDLLSCSKGTLTLRKLKMAPYS*YLTRLL*DLLAS*EFTRRSAPFLGPRKCY*VVKSKPLLIMTSMTLTNSLYLVMVTVFGIQWVSC*VQMGLL*KQAYVLSLKVNLL*IHLCQPKPF*GSSVIMLMQRTK**PYFALGIM*G*SLLPQNMR*VGSLEIASGLCVESYACSQIIFNLVPH*MAA*SQLSPLRSVDVKWMFLTTCAGPPQITYLKSCVKVVV*T*CISLKLSKHLTFALSVISMGRLRSSTLAGACQLYLT*PTSILDMLRRLATARRA*RWMS*EK*NDLLLTSFQ*MDQR*LTFQVLKGLKSCRGVC*GA*LV**VMRSLTIPSHGSQEYQLLISNLES*QSCLAPLELVKAFCTRAL*RGLKANS*PLFHPEGL*QIQLKETWKWMIVAKWQRLANQKKKVGTL*PLKCFLGKLQT*RQAIASFLMRFNCSLQAILTFVC*PYEVMLSFLLLVIPVKAHMTPKRIAQYWELSRVIY*DYLRVSPTGTTLRVGGL*IQCLSPDCHVISRRAP*LQHLLIMQSSTTCMTSFWLGLRPP*MRFWFQALRRRRLCSLTLA*SNSH*LLANQQG*TSNMVGF*FHMTHSTLMTVGG*RPYR 4885
Range 5: 2967 to 4562 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1154.8 bits(2514) | 0.0 | 502/532(94%) | 0/532(0%) | Minus/Plus |
Query 374 IKVARCA*E*EAINNSS*RRACDRHQLWTKGFGIFRGVQRGL*H*ED*RWFHIRDILQGSCEIFWQVESSQDGVLFFWIQGSAARLSNRSLC*L*H**L*QIPCTW*W*LFLAFSGFLVEYRWACFESRHKFFR*K*ISCRSIFVSPNRFEAAQ**CLCRERNDSLILH*ASCEANHYHPRI*GELEVWR*RVASVWNLMLAVKSFSTLCSIEWLHDHSYRLCAW*T*SGCS*LSVQALHKSHI*RAVSRWWLKHDVSR*GFRSI*HLC*V*YQWGD*GHQSWRAHVSSI*HNQRTYKTC*EDWQRPAEYKGG*AEKSETICS*PPFNEWIKDNLLSKF*KG*KAAGVFARRLNWCDK**EV*RFQAMALRNINF*YQISRVDSRAWHLWSW*KLSVQELYEEV*RQIRNLCFTQKGSSQFN*KRLGNG**LQSGKGW*IKKRRLGRCDL*SVS*ENCKPEGRPLRHF**GSTVPSRLY*PLSVDHTK*CFHFTCW*SLSKHI*LPKGSRNTGG*AE*YIEIT*G*VLQVQH 1969 I+VARCA*E*EAINNSS*RRACDRHQLWTKGFGIF VQRGL*H*E+*RW HIRDILQGSCEIFWQVESSQDGVL FW+QGSA RLSNRSLC*L*H *L*QIPCTW*W*LFLAFSGFLVEYRWACFESRH FFR*K*ISCRSIFVSPNRFEAAQ**CLCRERNDSLILH*ASCEA+HY+PRI*GELEVWR*RVASVWNLMLAVKSFSTLC I+WLHDHSYRLCA *T*SGCS*L VQALHKSHI*RAVSRWW +HDVSR* FRSI*HL *V*YQWGD*GHQ WRAHVSSI*HNQR Y TC*EDWQRPAE+KGG*AEKSETICS*PPFNEWIKDNLLSKF*KG*KAAGVFAR LNWCDK**EV*RFQAMALRNINF*YQISRVDSRAWHLWSW*KLSVQELYEEV*RQIRNLCFTQKGSS+FN*KRLGNG**LQSGKGW IKKRRLGRCDL*SVS*ENCKPEGRPLRHF**GSTVPSRLY*PLSV+HTK*CFHF+CW*SLSKHI*LPKGSRNTG *AE*YIEIT*G*VLQVQH Subject 2967 IQVARCA*E*EAINNSS*RRACDRHQLWTKGFGIF*VVQRGL*H*EN*RWLHIRDILQGSCEIFWQVESSQDGVLLFWVQGSATRLSNRSLC*L*HR*L*QIPCTW*W*LFLAFSGFLVEYRWACFESRHTFFR*K*ISCRSIFVSPNRFEAAQ**CLCRERNDSLILH*ASCEADHYYPRI*GELEVWR*RVASVWNLMLAVKSFSTLCPIKWLHDHSYRLCAR*T*SGCS*LPVQALHKSHI*RAVSRWWFEHDVSR*SFRSI*HLR*V*YQWGD*GHQPWRAHVSSI*HNQRAY*TC*EDWQRPAEHKGG*AEKSETICS*PPFNEWIKDNLLSKF*KG*KAAGVFARGLNWCDK**EV*RFQAMALRNINF*YQISRVDSRAWHLWSW*KLSVQELYEEV*RQIRNLCFTQKGSSKFN*KRLGNG**LQSGKGWQIKKRRLGRCDL*SVS*ENCKPEGRPLRHF**GSTVPSRLY*PLSVNHTK*CFHFSCW*SLSKHI*LPKGSRNTGS*AE*YIEIT*G*VLQVQH 4562
Range 6: 3462 to 4934 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1078.3 bits(2347) | 0.0 | 483/491(98%) | 0/491(0%) | Plus/Minus |
Query 2 STLMPVMFTKSKLWLKRDRAVIHLRSSVWNESCEIKTPPYLKFNPVDSPKVSVSCFMPK*DCTIFFSSKLETKIASKEVLDRAKRKSCMLWKMA*SANAAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVL*QGSPASEMKASLRMVNRQRSI*PGGNS*TSSKMTQWPAFRFAIFLRNTSKVTTSQPSFFDLPAFATXXXXXXXXXXXXXXARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLISEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTLLSSSTFILCGPLPIFSTCLICSLVMSNRADMRPPGLMTSISPLISHLAQMSNASKASARYIMFKPPP*HSSSNM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHRGHSLSPNFQLTSYSGVIMISLT*CLMQNK 1474 STLMPVMFTKSKLWLKRDRAV HLRSSVWNESCEIKTPP LKFNPVDSPKVSVSCFMPK*DCTIFFSSKLETKIASKEVLDRA+RKSCMLWK+A*SANAAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVL*QGSPA EMKASLRMVNRQRSI*PGGNS*TSSKMTQWPAFRFAIFLRNTSKVTTSQPSFFDLPAFATLQLSSISKSLLIE ARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLISEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFT LSSSTF+LCGPLPIFSTCLICSLVMSNRADMRPPGLMTSISPLISHLAQMSNASKASARYIMFKPPP*HSSSNM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHRGHSLSPNFQLTSYSGVIMISLT*CLMQNK Subject 3462 STLMPVMFTKSKLWLKRDRAVNHLRSSVWNESCEIKTPPCLKFNPVDSPKVSVSCFMPK*DCTIFFSSKLETKIASKEVLDRARRKSCMLWKIA*SANAAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVL*QGSPAREMKASLRMVNRQRSI*PGGNS*TSSKMTQWPAFRFAIFLRNTSKVTTSQPSFFDLPAFATLQLSSISKSLLIEFARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLISEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTFLSSSTFMLCGPLPIFSTCLICSLVMSNRADMRPPGLMTSISPLISHLAQMSNASKASARYIMFKPPP*HSSSNM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHRGHSLSPNFQLTSYSGVIMISLT*CLMQNK 4934
Range 7: 2967 to 3422 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
315.4 bits(682) | 0.0 | 149/152(98%) | 0/152(0%) | Plus/Minus |
Query 1514 CLKTVWADKDGSTRDSLSTKELMPAFKASPSVLNKKPTECQKQLPSPGTGNLLKXXXXXXXXXXI*QPSSTSLDPEKEHSVL*TLNLPEDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKTFGP*LVSIASAPSRTIIDCFLLLGTSSNFD 1969 CLKTVWADKDGSTRDSLSTKE MPAFKASPSVLNKKPTECQKQLPSPGTGNLLKSSMS*SAEASI*QPSSTSLDPEKEHSVL*TLNLPEDLTGAL*DITNMEPSSIFLMLKSPLN SKDPKTFGP*LVSIASAPSRTIIDCFLLLGTSSN D Subject 2967 CLKTVWADKDGSTRDSLSTKERMPAFKASPSVLNKKPTECQKQLPSPGTGNLLKSSMS*SAEASI*QPSSTSLDPEKEHSVL*TLNLPEDLTGAL*DITNMEPSSIFLMLKSPLNNSKDPKTFGP*LVSIASAPSRTIIDCFLLLGTSSNLD 3422
Range 8: 4599 to 4934 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
253.5 bits(547) | 0.0 | 103/112(92%) | 0/112(0%) | Minus/Plus |
Query 2 QTAMSFQEGLHDCSIR*LCHLPQHA*LPFGSV*DLLRCDFGFKL*GEEDCAVLLWHEATHTNFWRINRVKLQIWWSFNFT*LIPH**P*MDDGPIAL*PQLGLGKHYWHQRG 337 QTAMSFQEGLHDCSI *LC+LPQHA*LP GSV*DLLRCDFGFKL*GEEDCAVLLWHEATHTNFWRINRVKLQ WW F+FT*LIPH**P*+ DGPIAL*PQLGLG+HYWHQRG Subject 4599 QTAMSFQEGLHDCSIC*LCNLPQHA*LPSGSV*DLLRCDFGFKL*GEEDCAVLLWHEATHTNFWRINRVKLQTWWGFDFT*LIPH**P*VVDGPIAL*PQLGLGEHYWHQRG 4934
Grapevine rupestris stem pitting associated virus isolate VF1, partial genome
Sequence ID: KT948710.1 Length: 8716 Number of Matches: 9
Range 1: 2966 to 4936 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1521.0 bits(3313) | 0.0 | 631/657(96%) | 0/657(0%) | Minus/Plus |
Query 1 VSKLLDVPRSKKQSIIVLEGALAIDTSYGPKVLGSFEVFKGDFNIKKIEDGSIFVISYKAPVRSSGKLRVHKTECSFSGSKEVLLGCQIEASADYDIDDFNKFPVPGDGNCFWHSVGFLLSTDGLALKAGISSFVESESLVDPSLSAQTVLRQLSDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPGGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRRVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSDIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKIANLKAGHCVIFDEVQLFPPGYIDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKYGGVLISHDSFHTDDRRWMTALSRFSHNLDLVNITGISVE 1971 +SKLLDVPRSKKQSI+VLEGALA+DT YGPKVLGSFEVFKGDFNIKKIEDGSIFVISY+APVRS GKLRVH+TECSFSGSKEVLLGCQIEASADYDIDDFNKF VPGDGNCFWHSVGFLLSTDGLALKAGI SFVESESL DP+LS QTVL+QL DNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINP GRMSALFDITNEHIRHVEKIGNGPQSIKVDELR+VKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTS+IKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDD CKVAKAGKSK+EGWDVVTFEVFLRKI NLKAGHCVIFDEVQLFPPGY+DLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLD ILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFK+GG+LISHDSFHTDDRRW+TALSRFSHNLDLVNITG+SVE Subject 2966 LSKLLDVPRSKKQSILVLEGALAMDTGYGPKVLGSFEVFKGDFNIKKIEDGSIFVISYRAPVRSLGKLRVHRTECSFSGSKEVLLGCQIEASADYDIDDFNKFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESLADPALSTQTVLQQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDVILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGVSVE 4936
Range 2: 2972 to 4933 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1131.0 bits(2462) | 0.0 | 492/654(75%) | 0/654(0%) | Plus/Minus |
Query 4 HADASNVYQVQVVAKAR*GRHPSTVISVE*VM*N*NSTIFEV*PC*FAKS*CELLHAKVRLHNLLLLKA*NQNRI*GGLRPSQKEVMHVVEDGIISECCSHGALLEMTWQSGLKHWIHKPPTLNVVPVGLTLK*SQYITLLSPQYCAILLGVICALTGITSK*NESITSYGQQTKVNIAWREQLNLIKNDAMACLQVCNFPKKHFKGHNVPTFFF*FTSLCHFATIIHFQVSFN*IG*SPSG*NKGYEFAFRPLHKALVQKAFTSSKGAKHDCQLSRFDIRS*YS*EPWLGIVKLLITYHTS*AS*QTPLQLFSPFKTWKVSYL*SIH*KEVKSRSFHSSQLIHLYTLRAVANLLNMSYMFVGYVK*S*HAPARIDDLNLPIDITLSTNVKCFESLSEIHHV*ATTLTQLFKYVICGGPAQIVKNIHFTSTKRRGDSCDHAAIQWSTRLKMI*LQA*DSTQRPLAISKLPTHLIFWGDND*PHMMPNAE*GYHFVLCISIITELPQNGLG*QRWIYKRFTFNERTYACFQSKPICTQQETH*MPKTVTITRYREFVKVINVIISRGFDLTTEQHFLGSRKRALRLVNSQLARRSHRSLVRYHEYGTIFNLLNVKVPFEHLERSQNLWSITGVDRKRAFKNYY*LLLTPRHI*QL 1965 HA AS++YQVQVVAKA *GR P T+IS+E*VM*N NST+FEV P *F+K * +LLH KVRLHN LLLKA*N N +*G LRP QKE+MH+V++GIISE CSHGALLEMTWQSGLKHWIHKPP LNVVPVGL LK*SQYITLL P YCA+LLGVICAL G+TS+*NES+TSYG QTKVNIAWR+QLNLIK+ MACL + N +KHFKGH+VPT * LCHFA IIHFQ+SFN*I *SP G*NKGYEF FRPLHKAL+QK SSK KHDCQ RFDI S*Y *+PWLGI+K +TYH S*AS*QT LQLF PFK WKVSYL SIH +EVKSRS H SQ IHLY LRAV NLLNM YMF+ YVK S*HA ARID+LNLPI++TLSTNV+ FESLSEIHHV A TL Q FK VIC G AQIVKNI+FTSTKR G+SCDHAAIQW T LK+I*LQA +ST RPLAISKLPTH IFW DND PHMMPNAE*GYH VLCISI+T+L QN LG*Q WI K FTFN+RTYA FQSKPIC QQETH*+PK VTI RYREFVKVINVIISRG +LTT++HFL RK R V+SQ A+R HRS VRY++YG IFN LNV+VPFEHL+RSQNLW I + + FK+ Y*LLLTPRHI*QL Subject 2972 HAHASDIYQVQVVAKA**GR*PPTIISME*VM*NQNSTMFEVQPR*FSKC*RKLLHTKVRLHNFLLLKA*N*NDV*GSLRPGQKEIMHIVKNGIISESCSHGALLEMTWQSGLKHWIHKPPALNVVPVGLALK*SQYITLLGP*YCAVLLGVICALAGVTSE*NESVTSYG*QTKVNIAWRKQLNLIKDHTMACL*ILNLSEKHFKGHDVPTLSL*LACLCHFAAIIHFQISFN*IS*SPPG*NKGYEFTFRPLHKALIQKTLASSKSPKHDCQFPRFDI*S*YP*KPWLGIIKFFVTYHAS*AS*QTSLQLFCPFKAWKVSYLRSIHREEVKSRSLHFSQFIHLYALRAVTNLLNMPYMFISYVKQS*HASARIDNLNLPINVTLSTNVERFESLSEIHHVQAATLAQFFKNVICRGSAQIVKNIYFTSTKR*GNSCDHAAIQWGTWLKVI*LQAQNST*RPLAISKLPTHFIFWSDNDQPHMMPNAE*GYHLVLCISIVTKLLQNSLG*QSWICKGFTFNKRTYAGFQSKPICAQQETH*VPKAVTIARYREFVKVINVIISRGLNLTTKKHFLRPRKGTFRPVDSQFAKRPHRSPVRYYKYGAIFNFLNVEVPFEHLKRSQNLWPIASIHCECTFKD*Y*LLLTPRHI*QL 4933
Range 3: 3463 to 4935 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1018.8 bits(2217) | 0.0 | 456/491(93%) | 0/491(0%) | Plus/Minus |
Query 2 STLMPVMFTKSKLWLKRDRAVIHLRSSVWNESCEIKTPPYLKFNPVDSPKVSVSCFMPK*DCTIFFSSKLETKIASKEVLDRAKRKSCMLWKMA*SANAAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVL*QGSPASEMKASLRMVNRQRSI*PGGNS*TSSKMTQWPAFRFAIFLRNTSKVTTSQPSFFDLPAFATXXXXXXXXXXXXXXARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLISEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTLLSSSTFILCGPLPIFSTCLICSLVMSNRADMRPPGLMTSISPLISHLAQMSNASKASARYIMFKPPP*HSSSNM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHRGHSLSPNFQLTSYSGVIMISLT*CLMQNK 1474 STL PV+FTKSKLWLKRDRAV HLRSSVWNESCEIK PP LKF+PVDSP VSVSCF+PK*DCTIFFSSKLET++ SKEVLDRA+RKSC+L KMA*SA AAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVL QGSPASEMKASLRMVNRQRS *PGGNS*TSSK+TQWPAFRF+IFLRNTSKVTTSQPS FDLPAFATLQ SSIS+SLLIELARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLI EVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFT LSSSTF+LCGPLPIFSTCLICSLVMSNRADMRP GL+TSISPL+SHLAQMSNASKASARYIMF+PPP H+SS M*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGA G*K*FDCKHKIPH+GHSLSPNFQLTSYSGVIMI+LT*CLMQNK Subject 3463 STLTPVIFTKSKLWLKRDRAVNHLRSSVWNESCEIKIPPCLKFSPVDSPNVSVSCFIPK*DCTIFFSSKLETRMTSKEVLDRARRKSCIL*KMA*SAKAAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVLWQGSPASEMKASLRMVNRQRST*PGGNS*TSSKITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRSLLIELARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTFLSSSTFMLCGPLPIFSTCLICSLVMSNRADMRPLGLITSISPLMSHLAQMSNASKASARYIMFRPPPWHNSSKM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAHG*K*FDCKHKIPHKGHSLSPNFQLTSYSGVIMINLT*CLMQNK 4935
Range 4: 2968 to 3423 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
287.4 bits(621) | 0.0 | 138/152(91%) | 0/152(0%) | Plus/Minus |
Query 1514 CLKTVWADKDGSTRDSLSTKELMPAFKASPSVLNKKPTECQKQLPSPGTGNLLKXXXXXXXXXXI*QPSSTSLDPEKEHSVL*TLNLPEDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKTFGP*LVSIASAPSRTIIDCFLLLGTSSNFD 1969 C KTVW D+ GS RDSLST E MPAFKASPSVLNKKPTECQKQLPSPGT NLLKSSMS*SAEASI*QP STSLDPEKEHSVL TLNLP DLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKTFGP* VSIASAPSRT IDCFLLLGTSSN D Subject 2968 CCKTVWVDRAGSARDSLSTNERMPAFKASPSVLNKKPTECQKQLPSPGTENLLKSSMS*SAEASI*QPRSTSLDPEKEHSVLWTLNLPRDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKTFGP*PVSIASAPSRTSIDCFLLLGTSSNLD 3423
Range 5: 2967 to 4706 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
960.1 bits(2089) | 0.0 | 432/580(74%) | 0/580(0%) | Plus/Minus |
Query 231 RRS*TEPKGSHACCGRWHNQRMLQSWSPS*NDMAVWTQTLDSQTSDSQCCTCRTYPQVISIYHSAQPPVLRDPFGSHMCFDRDHQQVK*KHHFVWSTDKGQYSLEGTVEPHQK*RNGLPSGLQFS*ETLQRSQRPNLLFLIYQPLPLCNYHPFPSLF*LNWLEPFWVKQRLRICLQTSS*SSCTESFYQLQRCQARLSTLEI*YQKLIFLRAMAWNR*TXXXXXXXXXXXANTPAAFQPFQNLESKLSLIHSLKGGQEQIVSLFSAHPPLYSAGRCQSSQHVLYVRWLCQIELTCARQD**PQSPH*YHT*HKCQMLRKPQRDTSCLSHHLDTALQICDLWRACTDS*EHPLHVYQAQRR*L*SCSHSMEHKVENDLTASIRFHTEATRYLQTSNSPHILG***LASHDA*CRIRLSFRSLHKHYH*AASKRFGLTKMDLQEIHFQRKNLCLLSKQAHLYSTRNPLNAKNSYHHQVQGIC*SHQCHNQQRLRFDNRAALPWIQKKSTPSCELSTCQKISQEPCKISRIWNHLQSS*C*SPL*TPRKIPKPLVHNWCRSQARLQELLLIASYS*AHLATLI 1970 R+S*T P+G+HA C +WHNQR LQSWSPS*NDMAVWTQTLDSQTS SQCCTCRT PQVISIYH A+P VLR PFGSHMCF R HQ+VK*K HFVW TDKGQ+SLE T EPHQ+ NGLP Q *ETLQRS+RPN L L PLPLC++HPFP LF*LN LEP WVKQRLRI LQTSS*SS TE+ QLQ+ QARLS EI*Y KLI L+AMAWN * HLS QLSLLAN PAAF PFQ+LESKLS IHS +GGQEQI SLFS HPPL SAGR QSSQH LYV LCQ ELTC R D**PQSPH* HT*HKC+ LRKPQRDTSC HL T LQ CDL R CTDS*EH LHVYQA R+*L*SCSHSM H VE+DL AS +FH +ATRYLQTSNS HIL *** SHDA*CRIRLS RSLHKH H A+K+FGLT++DLQ IHFQ+ N+C LSKQAHL STRNPL+AK+SYH QVQ IC*SHQCHNQQR +FDN+ ALP QK++ PSC LS CQ+ SQEPCKI +IW+HLQ S*C*SPL*TP+KIPKPL H+ + LQ L+LIASYS*AHLAT I Subject 2967 RKS*TGPEGNHAYCEKWHNQRKLQSWSPS*NDMAVWTQTLDSQTSGSQCCTCRTCPQVISIYHFARPLVLRGPFGSHMCFGRGHQRVK*KRHFVWLTDKGQHSLEETAEPHQRSHNGLPLDSQSF*ETLQRSRRPNPLSLTCLPLPLCSHHPFPDLF*LN*LEPSWVKQRLRIYLQTSS*SSYTENSCQLQKSQARLSIPEI*YLKLISLKAMAWNH*IFRHLSRQLSLLANIPAAFLPFQSLESKLSSIHSSRGGQEQIASLFSVHPPLCSAGRYQSSQHALYVH*LCQTELTCVR*D**PQSPH*CHT*HKCRTLRKPQRDTSCSGRHLGTILQKCDL*RVCTDS*EHLLHVYQALRQ*L*SCSHSMGHMVESDLIASTKFHIKATRYLQTSNSLHILE***STSHDA*CRIRLSSRSLHKHCHQVAAKQFGLTELDLQGIHFQQTNVCRLSKQAHLCSTRNPLSAKSSYHRQVQRIC*SHQCHNQQRPQFDNQEALP*TQKRNIPSCGLSICQETSQEPCKILQIWSHLQFS*C*SPL*TPQKIPKPLAHSQYPLRVHLQGLVLIASYS*AHLATWI 4706
Range 6: 4749 to 4934 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
89.5 bits(189) | 0.0 | 43/62(69%) | 0/62(0%) | Plus/Minus |
Query 3 PR*CQ*CLPSPSCG*SAIGPSSIYGHQCGMSHVKLKLHHI*SLTLLIRQKLV*VASCQSKTA 188 PR Q* LPSPSCG*S IGP + Y HQ GMSHVK K HH+*S LI Q L *VAS QSKTA Subject 4749 PRSRQ*YLPSPSCG*SVIGPLTTYDHQYGMSHVKSKFHHV*SSAPLILQMLA*VASYQSKTA 4934
Range 7: 2968 to 4563 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
846.9 bits(1842) | 0.0 | 390/532(73%) | 0/532(0%) | Minus/Plus |
Query 374 IKVARCA*E*EAINNSS*RRACDRHQLWTKGFGIFRGVQRGL*H*ED*RWFHIRDILQGSCEIFWQVESSQDGVLFFWIQGSAARLSNRSLC*L*H**L*QIPCTW*W*LFLAFSGFLVEYRWACFESRHKFFR*K*ISCRSIFVSPNRFEAAQ**CLCRERNDSLILH*ASCEANHYHPRI*GELEVWR*RVASVWNLMLAVKSFSTLCSIEWLHDHSYRLCAW*T*SGCS*LSVQALHKSHI*RAVSRWWLKHDVSR*GFRSI*HLC*V*YQWGD*GHQSWRAHVSSI*HNQRTYKTC*EDWQRPAEYKGG*AEKSETICS*PPFNEWIKDNLLSKF*KG*KAAGVFARRLNWCDK**EV*RFQAMALRNINF*YQISRVDSRAWHLWSW*KLSVQELYEEV*RQIRNLCFTQKGSSQFN*KRLGNG**LQSGKGW*IKKRRLGRCDL*SVS*ENCKPEGRPLRHF**GSTVPSRLY*PLSVDHTK*CFHFTCW*SLSKHI*LPKGSRNTGG*AE*YIEIT*G*VLQVQH 1969 I+VARCA*E*EAIN S *R + + LW KGFGIF GVQRGL H*E+*RW HI +ILQGSCE+ WQ+ES QDG+ FW+ GSA+ LSN LC*L*H**L*QI CTW W*L LA SGFLVE+RWACFESRH F *K*I CRS V+PN F A * CLCRER+DSLILH*ASCE +HYH RI* ELEVWR*RVA +WN +LA+KS ST+C IEWLHDHSY L AW*T*S CS*LSVQ L+KSH *R V RW +HDVSR*GFRS+ HLC*V*+ WGD*G+QS R HVSS+*HN TYK C*EDW RPAE+KGG* EKSE ICS*PP +EWI+DNLLSK *KG KAAG+FARRLNW DK* ++* FQAMA R+INF YQIS +DSRAW WSW + SV ELYEEV*R IRNLCFTQ+GSS FN*KR GNG* LQSGKG +K+R LGR DL*SVS ++ + +GRPL **GS V SRL *PLSV+HTK* FHFT W* L KHI*LPKG RNT G A+*YIEIT*G VLQVQH Subject 2968 IQVARCA*E*EAINTSP*RCTRNGYWLWAKGFGIF*GVQRGLQH*EN*RWLHICNILQGSCEVSWQIESPQDGMFLFWV*GSASWLSN*GLC*L*H**L*QILCTWRW*LLLALSGFLVEHRWACFESRHTFVC*K*IPCRSSSVNPNCFAATW*QCLCRERDDSLILH*ASCEVDHYHSRI*SELEVWR*RVAFMWNFVLAIKSLSTMCPIEWLHDHSYCLSAW*T*SRCS*LSVQTLYKSHF*RIVPRWRPEHDVSR*GFRSVRHLC*V*H*WGD*GYQS*RTHVSSV*HN**TYKAC*EDW*RPAEHKGG*TEKSEAICS*PPLDEWIEDNLLSKL*KGRKAAGMFARRLNWRDK*RKI**FQAMAFRDINFKYQISGIDSRAWDFWSWQEFSV*ELYEEV*R*IRNLCFTQEGSS*FN*KRSGNG*WLQSGKGRQVKERGLGRRDL*SVSQKD*ESKGRPLCDL**GSAVSSRLC*PLSVNHTK*RFHFTRW*PLPKHI*LPKGPRNTRGRAK*YIEIT*GQVLQVQH 4563
Range 8: 4600 to 4935 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
191.2 bits(411) | 0.0 | 79/112(71%) | 0/112(0%) | Minus/Plus |
Query 2 QTAMSFQEGLHDCSIR*LCHLPQHA*LPFGSV*DLLRCDFGFKL*GEEDCAVLLWHEATHTNFWRINRVKLQIWWSFNFT*LIPH**P*MDDGPIAL*PQLGLGKHYWHQRG 337 QTAMSFQEGLHDCS R*LCH Q+A* P G V*D LR FKL*GEE+CAVLLW+EAT+ N WRIN +LQ WW+F+FT*LIP+** *+ +GPI L*PQLGLGK++W +RG Subject 4600 QTAMSFQEGLHDCSFR*LCHFSQYA*FPSGPV*DFLRRHSSFKL*GEENCAVLLWYEATYANIWRINGAELQTWWNFDFT*LIPY**S*VVNGPITL*PQLGLGKYHWRERG 4935
Range 9: 2967 to 4883 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
958.3 bits(2085) | 0.0 | 481/639(75%) | 0/639(0%) | Minus/Plus |
Query 54 YQSC*MCLGVRSNQ**FLKARLRSTPVMDQRFWDLSRCSKGTLTLRRLKMVPYS*YXXXXXXXXLAS*EFTRRSALFLDPRKCCSVVKSKPLLIMTLMTLTNSLYLVMVTVFGIQWVSC*VQMGLL*KQA*VLSLKVNLL*IHLCQPKPF*GSSVIMLMQRTK**PYSALGIM*G*SLSPQNMR*VGSLEIASGLCVESYACSQIIFNLVLH*MAA*SQLSPLRLVDVKWMFLTICAGPPQITYLKSCVKVVA*T*CISLRLSKHLTFVLSVISMGRLRSSILAGACQLYLT*PTNI*DMXXXXXXXXXXXRWMS*EE*NDLLLTSFQ*MDQR*LTFQVLKGLKSCRGVC*EA*LV**VMRSLTIPSHGSQEYQLLISNLES*QSCLAPLELVKAFCTRAL*RGLKANS*PLFHPEGL*PIQLKETWKWMIVAKWQRLVNQKKKVGTL*PLKCFLGKLQT*RQAIASFLMRFNCSLQAILTFVC*PYEVMLSFHLLVIPVKAHMTPKRIAQYWGLSRVIY*DYLRVSPTGTTLRVGGL*IQCLSPDCHVISRRAP*LQHSLIMPSSTTCMTSFWLGLRPP*MRFWFQALRRRRLCSLTLA*SNSH*LLANQQG*TSNMVEF*FHMTHSTLMTVDG*RPY 1970 Y SC*MCLGVRSNQ * LK + M QRFWDL RCSKGT TLR+LKM PY *YLT LL* LLA+*E T R+ FL RKC VVK +PLLIMTLMTLTNSLYL MVT FG QWVSC* QMGLL*K A V LKVN L I LCQPK F + V MLMQRT+**PYSALGIM*G*SLS QNM+*VGSLEIASGL VE AC+QI FN V H*MAA*SQL P RLVDVK MFLTICA P QIT+LK+C KV A*T*CISLRLSK TFVLSV MGRLR SILA ACQL LT* NI* MLRRL TARR *RWM+*E+*+DLLLTS +*MD+R*LTFQ LKG KSCR VC*EA*L **V ++L IPSHG Q YQL ISNL +*QSCL LEL + FC RAL*RGLK NS*PLFHP GL* IQLKE WKWM+ AKWQR +Q+++VGT *PLKCF +L+ *RQAI LMRF+C LQA+LTFVC*PYEV LSFH LV P KAHMTPKR AQY G S+VIY*DYLR SPTGTTLR GGL*IQCLSPDCHVISRRAP*LQ SLIMP T CM SFW GLR P* F FQALRRR+LCSLTL *SN * L NQ+G*TSNMVEF*FHMTHS LM V G*RPY Subject 2967 YPSC*MCLGVRSNQY*SLKVHSQWILAMGQRFWDLLRCSKGTSTLRKLKMAPYL*YLTGLL*GLLAN*ESTGRNVPFLGLRKCFLVVKLRPLLIMTLMTLTNSLYLAMVTAFGTQWVSC*AQMGLL*KPAYVRLLKVNPLQIQLCQPKLFCSNLVTMLMQRTR**PYSALGIM*G*SLSLQNMK*VGSLEIASGLYVEFCACNQITFNHVPH*MAA*SQLLPQRLVDVK*MFLTICADPLQITFLKNCAKVAA*T*CISLRLSKRSTFVLSVTLMGRLRLSILADACQLCLT*LMNI*GMLRRLVTARRA*RWMN*EK*SDLLLTSSR*MDRR*LTFQALKGQKSCRDVC*EA*LA**VTKNLMIPSHGFQGYQLQISNLGN*QSCLGLLELARVFCIRAL*RGLKVNS*PLFHPGGL*LIQLKEIWKWMMAAKWQRQASQRERVGTS*PLKCFSERLRI*RQAIV*SLMRFSCFLQAMLTFVC*PYEVTLSFHSLVTPAKAHMTPKRTAQY*GPSKVIY*DYLRASPTGTTLRAGGL*IQCLSPDCHVISRRAP*LQLSLIMPFFTICMISFWPGLRLP*TSF*FQALRRRKLCSLTLV*SNLR*HLENQRG*TSNMVEF*FHMTHSILMIVGG*RPY 4883
Grapevine rupestris stem pitting associated virus isolate CS BR, complete genome
Sequence ID: KX958435.1 Length: 8743 Number of Matches: 9
Range 1: 2966 to 4936 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1517.7 bits(3306) | 0.0 | 630/657(96%) | 0/657(0%) | Minus/Plus |
Query 1 VSKLLDVPRSKKQSIIVLEGALAIDTSYGPKVLGSFEVFKGDFNIKKIEDGSIFVISYKAPVRSSGKLRVHKTECSFSGSKEVLLGCQIEASADYDIDDFNKFPVPGDGNCFWHSVGFLLSTDGLALKAGISSFVESESLVDPSLSAQTVLRQLSDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPGGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRRVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSDIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKIANLKAGHCVIFDEVQLFPPGYIDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKYGGVLISHDSFHTDDRRWMTALSRFSHNLDLVNITGISVE 1971 +SKLLDVPRSKKQSI+VLEGALA+DT YGPKVLGSFEVFKGDFNIKKIEDGSIFVISY+APVRS GKLRVH+TECSFSGSKEVLLGCQIEASADYDIDDFNKF VPGDGNCFWHSVGFLLSTDGLALKAGI SFVESESL DP+LS QTVL+QL DNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINP GRM ALFDITNEHIRHVEKIGNGPQSIKVDELR+VKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTS+IKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDD CKVAKAGKSK+EGWDVVTFEVFLRKI NLKAGHCVIFDEVQLFPPGY+DLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKT LD ILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFK+GG+LISHDSFHTDDRRW+TALSRFSHNLDLVNITGISVE Subject 2966 LSKLLDVPRSKKQSILVLEGALAMDTGYGPKVLGSFEVFKGDFNIKKIEDGSIFVISYRAPVRSPGKLRVHRTECSFSGSKEVLLGCQIEASADYDIDDFNKFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESLADPALSTQTVLKQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMPALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTPLDVILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGISVE 4936
Range 2: 2978 to 4933 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1130.5 bits(2461) | 0.0 | 494/652(76%) | 0/652(0%) | Plus/Minus |
Query 4 HADASNVYQVQVVAKAR*GRHPSTVISVE*VM*N*NSTIFEV*PC*FAKS*CELLHAKVRLHNLLLLKA*NQNRI*GGLRPSQKEVMHVVEDGIISECCSHGALLEMTWQSGLKHWIHKPPTLNVVPVGLTLK*SQYITLLSPQYCAILLGVICALTGITSK*NESITSYGQQTKVNIAWREQLNLIKNDAMACLQVCNFPKKHFKGHNVPTFFF*FTSLCHFATIIHFQVSFN*IG*SPSG*NKGYEFAFRPLHKALVQKAFTSSKGAKHDCQLSRFDIRS*YS*EPWLGIVKLLITYHTS*AS*QTPLQLFSPFKTWKVSYL*SIH*KEVKSRSFHSSQLIHLYTLRAVANLLNMSYMFVGYVK*S*HAPARIDDLNLPIDITLSTNVKCFESLSEIHHV*ATTLTQLFKYVICGGPAQIVKNIHFTSTKRRGDSCDHAAIQWSTRLKMI*LQA*DSTQRPLAISKLPTHLIFWGDND*PHMMPNAE*GYHFVLCISIITELPQNGLG*QRWIYKRFTFNERTYACFQSKPICTQQETH*MPKTVTITRYREFVKVINVIISRGFDLTTEQHFLGSRKRALRLVNSQLARRSHRSLVRYHEYGTIFNLLNVKVPFEHLERSQNLWSITGVDRKRAFKNYY*LLLTPRHI* 1959 HA ASN+YQVQVVA+A *GR P VIS+E*VM*N*NST+FEV P *F+K *C+LLH KVRLHN LLLKA*N N I*G LRPSQKEVMH+V++GI+SE CSHGALLEMTW S LKHWIHK PTLNVVPVGL LK QYITLL P YCA+LLGVICALTG+TS+*NES+TSYG QT+VNIAWR+QLNLI++ MACL + N +KHFKGHNVPT *F LCHFATIIHFQVSFN*IG*SP G*NKGYEF FR LH+ALVQKAF SSK +KH+C RFDI S*YS*+PWLGI+K LITYHTS*AS* T LQLF PFK WKVSY SIH*+EVKSRSFH SQ IHLY LRAV NLL+MSYMF+GYVK S HA ARID+ NLPI+ITLSTNV+CFESLSEIHHV +TTL Q FK VICGG QIVKNIHFTS +R G+SCDHA+IQW T LKMI*LQA +ST RPLA+SKLPTH IFWG+N PHMMPNAE*GYH +LCISI+T+L QN LG*Q WI K FTF++RTY FQSKPIC QQE H*+PK V ITR R+FVKVIN+IISRG +LTTE HFL SRK R V+SQ ARR HRS VRYH+YG IFN LNVKVPFE+L+RSQNLW I G+ K FK+ Y*LLLTPRHI* Subject 2978 HAYASNIYQVQVVAEA**GR*PPAVISME*VM*N*NSTMFEVQPR*FSKC*CKLLHTKVRLHNFLLLKA*N*NDI*GSLRPSQKEVMHIVKNGIVSESCSHGALLEMTW*SRLKHWIHKSPTLNVVPVGLALKQPQYITLLGP*YCAVLLGVICALTGVTSE*NESVTSYG*QTQVNIAWRKQLNLIEDHTMACL*IFNLSEKHFKGHNVPTLSL*FACLCHFATIIHFQVSFN*IG*SPPG*NKGYEFTFRSLHEALVQKAFASSKSSKHNC*FPRFDI*S*YS*KPWLGIIKFLITYHTS*AS**TSLQLFCPFKAWKVSYFRSIH*EEVKSRSFHFSQFIHLYALRAVTNLLDMSYMFIGYVKQSWHASARIDNFNLPINITLSTNVECFESLSEIHHVQSTTLAQFFKNVICGGSTQIVKNIHFTSAERGGNSCDHASIQWGTGLKMI*LQAQNST*RPLAVSKLPTHFIFWGNNYQPHMMPNAE*GYHLILCISIVTKLLQNSLG*QSWICKGFTFDKRTYTSFQSKPICAQQEAH*VPKAVAITRNRKFVKVINIIISRGLNLTTE*HFLRSRKGTFRPVDSQFARRPHRSPVRYHKYGAIFNFLNVKVPFEYLKRSQNLWPIAGIHCKCTFKD*Y*LLLTPRHI* 4933
Range 3: 3463 to 4935 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1004.1 bits(2185) | 0.0 | 450/491(92%) | 0/491(0%) | Plus/Minus |
Query 2 STLMPVMFTKSKLWLKRDRAVIHLRSSVWNESCEIKTPPYLKFNPVDSPKVSVSCFMPK*DCTIFFSSKLETKIASKEVLDRAKRKSCMLWKMA*SANAAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVL*QGSPASEMKASLRMVNRQRSI*PGGNS*TSSKMTQWPAFRFAIFLRNTSKVTTSQPSFFDLPAFATXXXXXXXXXXXXXXARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLISEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTLLSSSTFILCGPLPIFSTCLICSLVMSNRADMRPPGLMTSISPLISHLAQMSNASKASARYIMFKPPP*HSSSNM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHRGHSLSPNFQLTSYSGVIMISLT*CLMQNK 1474 STLMPV+FTKSKLWLKRDRAV HLRSSVWNESCEIK PP LKF+PVDSP VSVSCF+PK*DCTIFFSSKLET++ S+ VLD A+RKSC+L KMA*SA AAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVL*QGSPASEMKASLRMV+R RS *PGGNS*TSSK+TQWPAFRF+IFLRNTSKVTTSQPS FDLPAFATLQ SSIS+SLLIELARALLGETKVTNLPSDLF+KLLY+KLLPAPKVPSTTVNSRDLI EVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFT LSSSTF+LCGPLPIFSTCLICSLVMSNRA MRP GL+TSISPLISHLAQMSNASKASARYIMF PPP H+SS M*FVEGLHR*LRTSTSRLPSAEAIAVIM PFNGAQG*K*FDCKHKIPH+GHSLSPNFQLTSYSGVI+I+LT*CLMQNK Subject 3463 STLMPVIFTKSKLWLKRDRAVNHLRSSVWNESCEIKIPPCLKFSPVDSPNVSVSCFIPK*DCTIFFSSKLETRMTSRGVLDLARRKSCIL*KMA*SAKAAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVL*QGSPASEMKASLRMVSRHRST*PGGNS*TSSKITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRSLLIELARALLGETKVTNLPSDLFMKLLYKKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTFLSSSTFMLCGPLPIFSTCLICSLVMSNRAGMRPLGLITSISPLISHLAQMSNASKASARYIMFSPPPWHNSSKM*FVEGLHR*LRTSTSRLPSAEAIAVIMHPFNGAQG*K*FDCKHKIPHKGHSLSPNFQLTSYSGVIIINLT*CLMQNK 4935
Range 4: 2968 to 3423 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
285.2 bits(616) | 0.0 | 136/152(89%) | 0/152(0%) | Plus/Minus |
Query 1514 CLKTVWADKDGSTRDSLSTKELMPAFKASPSVLNKKPTECQKQLPSPGTGNLLKXXXXXXXXXXI*QPSSTSLDPEKEHSVL*TLNLPEDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKTFGP*LVSIASAPSRTIIDCFLLLGTSSNFD 1969 C KTVW D+ GS RDSLST E +PAFKASPSVLNKKPTECQKQLPSPGT NLLKSS+S*SAEASI*QPSSTSLDPEKEHSVL TLNLP DLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKTFGP* VSIASAPSRT IDCFLLLGTSS+ D Subject 2968 CFKTVWVDRAGSARDSLSTNERIPAFKASPSVLNKKPTECQKQLPSPGTENLLKSSIS*SAEASI*QPSSTSLDPEKEHSVLWTLNLPGDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKTFGP*PVSIASAPSRTSIDCFLLLGTSSSLD 3423
Range 5: 2968 to 4563 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
850.1 bits(1849) | 0.0 | 386/532(73%) | 0/532(0%) | Minus/Plus |
Query 374 IKVARCA*E*EAINNSS*RRACDRHQLWTKGFGIFRGVQRGL*H*ED*RWFHIRDILQGSCEIFWQVESSQDGVLFFWIQGSAARLSNRSLC*L*H**L*QIPCTW*W*LFLAFSGFLVEYRWACFESRHKFFR*K*ISCRSIFVSPNRFEAAQ**CLCRERNDSLILH*ASCEANHYHPRI*GELEVWR*RVASVWNLMLAVKSFSTLCSIEWLHDHSYRLCAW*T*SGCS*LSVQALHKSHI*RAVSRWWLKHDVSR*GFRSI*HLC*V*YQWGD*GHQSWRAHVSSI*HNQRTYKTC*EDWQRPAEYKGG*AEKSETICS*PPFNEWIKDNLLSKF*KG*KAAGVFARRLNWCDK**EV*RFQAMALRNINF*YQISRVDSRAWHLWSW*KLSVQELYEEV*RQIRNLCFTQKGSSQFN*KRLGNG**LQSGKGW*IKKRRLGRCDL*SVS*ENCKPEGRPLRHF**GSTVPSRLY*PLSVDHTK*CFHFTCW*SLSKHI*LPKGSRNTGG*AE*YIEIT*G*VLQVQH 1969 ++ RCA*E*EAIN S *R C+ ++LW KGFGIF G+QRGL*H*E+*RW HI DILQGSCE+ WQ+ES QDG+ FWI GSA RLSN LC*L*+**L*QI C+W*W L LA SG LVE+RWACFES + F K*I CRS V+PN FEA * CLCRE +DSLILH*ASCE ++Y+PRI* ELEVWR RVA +WN +LAVKSFSTLC IEW+HDHSY L A T*SGCS*LSV LHKSH *R V RWW +HDVSR*GFRSI HLC*V*Y WGD* +QS R H SS+*HNQ TYKTC EDW RPA++KGG* EKSETICS*PP NEWI++NLLSK *KG KAA +F RRLNWCDK**E+* FQAMA RNINF YQIS ++S AW+ WSW KL VQEL+EE+*R IRNLCFTQ+GSSQFN*KR GNG* LQSGKG IK+R LGRCDL*SVS ++ K +GRPL *GS V SRL *P+S +HTK* FHFT W* LSKHI*LPKG RNT G A+*YIE+ *G VLQVQH Subject 2968 VQATRCA*E*EAINTSP*RCTCNGYRLWAKGFGIF*GIQRGL*H*EN*RWLHICDILQGSCEVSWQIESPQDGMFLFWI*GSATRLSN*GLC*L*Y**L*QIFCSW*WQLLLALSGLLVEHRWACFESWYTFVCRK*IPCRSSSVNPNCFEATW*QCLCRE*DDSLILH*ASCEVDNYYPRI*SELEVWRQRVAFMWNFVLAVKSFSTLCPIEWMHDHSYCLRARQT*SGCS*LSV*TLHKSHF*RIVPRWWTEHDVSR*GFRSIRHLC*V*Y*WGD*SYQS*RTHASSV*HNQ*TYKTCREDW*RPAKHKGG*TEKSETICS*PPLNEWIENNLLSKL*KGRKAARMFTRRLNWCDK**EI**FQAMAFRNINFKYQISGINSCAWNFWSWQKLFVQELHEEI*R*IRNLCFTQEGSSQFN*KRPGNG*WLQSGKGRQIKERGLGRCDL*SVSQKD*KSKGRPLCDLR*GSAVSSRLC*PVSANHTK*RFHFTRW*PLSKHI*LPKGPRNTRGRAK*YIEVA*GQVLQVQH 4563
Range 6: 4603 to 4935 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
198.1 bits(426) | 0.0 | 81/111(73%) | 0/111(0%) | Minus/Plus |
Query 2 TAMSFQEGLHDCSIR*LCHLPQHA*LPFGSV*DLLRCDFGFKL*GEEDCAVLLWHEATHTNFWRINRVKLQIWWSFNFT*LIPH**P*MDDGPIAL*PQLGLGKHYWHQRG 334 T MSFQEGLHDCS R*LCH Q+A*LP G V*D RC FKL*GEE+CAVLLW+EAT+TN WRIN +LQ WW+FNFT*LIP+**P + +GPI L PQLGLGK+YWH+RG Subject 4603 TTMSFQEGLHDCSFR*LCHFSQYA*LPSG*V*DSPRCHSSFKL*GEENCAVLLWYEATYTNIWRINGAELQTWWNFNFT*LIPY**PQVVNGPITLQPQLGLGKYYWHKRG 4935
Range 7: 2979 to 4700 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
945.0 bits(2056) | 0.0 | 426/574(74%) | 0/574(0%) | Plus/Minus |
Query 237 S*TEPKGSHACCGRWHNQRMLQSWSPS*NDMAVWTQTLDSQTSDSQCCTCRTYPQVISIYHSAQPPVLRDPFGSHMCFDRDHQQVK*KHHFVWSTDKGQYSLEGTVEPHQK*RNGLPSGLQFS*ETLQRSQRPNLLFLIYQPLPLCNYHPFPSLF*LNWLEPFWVKQRLRICLQTSS*SSCTESFYQLQRCQARLSTLEI*YQKLIFLRAMAWNR*TXXXXXXXXXXXANTPAAFQPFQNLESKLSLIHSLKGGQEQIVSLFSAHPPLYSAGRCQSSQHVLYVRWLCQIELTCARQD**PQSPH*YHT*HKCQMLRKPQRDTSCLSHHLDTALQICDLWRACTDS*EHPLHVYQAQRR*L*SCSHSMEHKVENDLTASIRFHTEATRYLQTSNSPHILG***LASHDA*CRIRLSFRSLHKHYH*AASKRFGLTKMDLQEIHFQRKNLCLLSKQAHLYSTRNPLNAKNSYHHQVQGIC*SHQCHNQQRLRFDNRAALPWIQKKSTPSCELSTCQKISQEPCKISRIWNHLQSS*C*SPL*TPRKIPKPLVHNWCRSQARLQELLLIASYS*AHL 1958 S*T P+GSHA C +WH+QR LQSWSPS*NDM V TQTLDSQ SDSQCCTCRT PQ SIYH A+P VLR PFGSHMCFDR HQ+VK*K HFVW D GQ+SLE T EPH++ NGLP Q *ETLQRSQRPN L LI PLPLCN+HPFP LF*LNWLEP WVKQRLRI LQ SS*SSCT+SF QLQ+ QA+L EI*Y KLIFL+AMAWN * SHHLSHQLSLL N AAF PFQ+LESKL IHSL+GGQEQIVSLFS HPPL AGR QSS+HVLYV WLCQ EL C R D** QSPH*YHT*HKC+MLRKPQRDTSC HHL T LQ CDLWR TDS*EHPLHV +A+R+*L*SC HSM H+VENDLTAS +FH +ATR LQTSNS HILG** SHDA*CRIRLS SLHKH H ASK+FGLT++DLQ IHF++ N+ LSKQAHL STR+PL+AK+S HHQ Q IC*SHQ HNQQR +FDNR ALP IQK++ PSC LS CQ+ SQEPCKIS+IW+HLQ S*C*SPL* P+KIPKPL H+ Q LQ L+LIASYS*AHL Subject 2979 S*T*PEGSHAYCEKWHSQRKLQSWSPS*NDMVV*TQTLDSQISDSQCCTCRTCPQATSIYHFARPLVLRGPFGSHMCFDRGHQRVK*KRHFVWLADTGQHSLEETAEPHRRSHNGLPLDFQSF*ETLQRSQRPNPLSLICLPLPLCNHHPFPGLF*LNWLEPSWVKQRLRIYLQISS*SSCTKSFCQLQKFQAQLLIPEI*YLKLIFLKAMAWNH*ISHHLSHQLSLLVNILAAFLPFQSLESKLFSIHSLRGGQEQIVSLFSVHPPLCFAGRYQSSRHVLYVHWLCQTELACVR*D**LQSPH*YHT*HKCRMLRKPQRDTSCSVHHLGTILQKCDLWRVYTDS*EHPLHVCRARRQ*L*SCIHSMGHRVENDLTASTKFHIKATRCLQTSNSLHILG**LSTSHDA*CRIRLSSHSLHKHCHQVASKQFGLTELDLQGIHFRQTNVYQLSKQAHLCSTRSPLSAKSSCHHQEQKIC*SHQYHNQQRPQFDNRVALP*IQKRNIPSCGLSICQETSQEPCKISQIWSHLQFS*C*SPL*IPQKIPKPLAHSRYPLQVHLQGLVLIASYS*AHL 4700
Range 8: 4749 to 4934 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
98.7 bits(209) | 0.0 | 46/62(74%) | 0/62(0%) | Plus/Minus |
Query 3 PR*CQ*CLPSPSCG*SAIGPSSIYGHQCGMSHVKLKLHHI*SLTLLIRQKLV*VASCQSKTA 188 PR CQ* LPSPSCG*S IGP + GHQ GMSHVKLK HH+*S LI Q LV*VAS QSKTA Subject 4749 PRLCQ*YLPSPSCG*SVIGPLTTCGHQYGMSHVKLKFHHV*SSAPLILQMLV*VASYQSKTA 4934
Range 9: 2973 to 4883 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
964.2 bits(2098) | 0.0 | 482/637(76%) | 0/637(0%) | Minus/Plus |
Query 54 SC*MCLGVRSNQ**FLKARLRSTPVMDQRFWDLSRCSKGTLTLRRLKMVPYS*YXXXXXXXXLAS*EFTRRSALFLDPRKCCSVVKSKPLLIMTLMTLTNSLYLVMVTVFGIQWVSC*VQMGLL*KQA*VLSLKVNLL*IHLCQPKPF*GSSVIMLMQRTK**PYSALGIM*G*SLSPQNMR*VGSLEIASGLCVESYACSQIIFNLVLH*MAA*SQLSPLRLVDVKWMFLTICAGPPQITYLKSCVKVVA*T*CISLRLSKHLTFVLSVISMGRLRSSILAGACQLYLT*PTNI*DMXXXXXXXXXXXRWMS*EE*NDLLLTSFQ*MDQR*LTFQVLKGLKSCRGVC*EA*LV**VMRSLTIPSHGSQEYQLLISNLES*QSCLAPLELVKAFCTRAL*RGLKANS*PLFHPEGL*PIQLKETWKWMIVAKWQRLVNQKKKVGTL*PLKCFLGKLQT*RQAIASFLMRFNCSLQAILTFVC*PYEVMLSFHLLVIPVKAHMTPKRIAQYWGLSRVIY*DYLRVSPTGTTLRVGGL*IQCLSPDCHVISRRAP*LQHSLIMPSSTTCMTSFWLGLRPP*MRFWFQALRRRRLCSLTLA*SNSH*LLANQQG*TSNMVEF*FHMTHSTLMTVDG*RPY 1964 S *MCLGVRSNQ * LK L+ P M QRFWDL R SKGTLTLR+LKM PY *YLT LL* LLA+*E T R+ FLD RKC SVVK +PLLIM LMTLTN L+LVM T FG QW SC* QMGLL*K V KVN L I LCQPK F* + V MLMQR +**PYSALGIM*G* L PQNM+*VGSLE ASGL VE ACSQIIFN V H*M A*SQL P R DVKWMFLTIC PPQIT+LK+C KVV *T*CISLRLSKH TFVLSVI MGRL+ SILA ACQL LT*P NI*DM RRL TAR+ *RWM+*E+*NDLLLTS Q*MD++*LTFQ LKG KSC+ V *EA*LV**VMR+L IPSHG QEYQL ISNL +*Q CL LEL KAFCTRA *R LK NS*PLFHP GL*PIQLKETWKWM+VAKWQR NQ+++VGTL*PLKCF +L+ *RQAI MRF+C LQA+LT VC*PYEV LSFH LV PVKAHMTPKR AQY G S+VIY* LR SPTGTTLRVG L*IQCLS D HVISRRAP*LQ SL MP T CMTSFWLGLR P*M F FQALRRR+LCSLTL *SN H* L NQ+G*TSNMVEF*FHMTHS LMT G*RPY Subject 2973 SY*MCLGVRSNQY*SLKVHLQWIPAMGQRFWDLLRYSKGTLTLRKLKMAPYL*YLTGLL*GLLAN*ESTGRNVPFLDLRKCYSVVKLRPLLIMILMTLTNFLFLVMATAFGTQWASC*AQMGLL*KLVYVRLSKVNPLQIQLCQPKLF*SNLVTMLMQRMR**PYSALGIM*G**LLPQNMK*VGSLETASGLYVEFCACSQIIFNPVPH*MDA*SQLLPPRSADVKWMFLTICVDPPQITFLKNCAKVVD*T*CISLRLSKHSTFVLSVILMGRLKLSILADACQLCLT*PMNI*DMSRRLVTARKA*RWMN*EK*NDLLLTSSQ*MDRK*LTFQALKGQKSCKDVY*EA*LV**VMRNLMIPSHGFQEYQLQISNLGN*QLCLELLELAKAFCTRAS*RDLKVNS*PLFHPGGL*PIQLKETWKWMMVAKWQRQANQRERVGTL*PLKCFSERLKI*RQAIV*SSMRFSCFLQAMLTCVC*PYEVTLSFHSLVTPVKAHMTPKRTAQY*GPSKVIY*GCLRASPTGTTLRVGDL*IQCLSLDYHVISRRAP*LQLSLTMPFFTICMTSFWLGLRLP*MSF*FQALRRRKLCSLTLV*SNLH*HLENQRG*TSNMVEF*FHMTHSILMTAGG*RPY 4883
Grapevine rupestris stem pitting associated virus isolate SK704 A, complete genome
Sequence ID: KX274274.1 Length: 8725 Number of Matches: 9
Range 1: 2965 to 4935 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1517.7 bits(3306) | 0.0 | 627/657(95%) | 0/657(0%) | Minus/Plus |
Query 1 VSKLLDVPRSKKQSIIVLEGALAIDTSYGPKVLGSFEVFKGDFNIKKIEDGSIFVISYKAPVRSSGKLRVHKTECSFSGSKEVLLGCQIEASADYDIDDFNKFPVPGDGNCFWHSVGFLLSTDGLALKAGISSFVESESLVDPSLSAQTVLRQLSDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPGGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRRVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSDIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKIANLKAGHCVIFDEVQLFPPGYIDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKYGGVLISHDSFHTDDRRWMTALSRFSHNLDLVNITGISVE 1971 +SKLLDVPRSKKQSI+VLEGALA+DT YGPK+LGSFEVFKGDFNIKKIEDGSIFVISY+APVRS GKLRVH+TECSFSGS+EVLLGCQIEASADYDIDDFNKF VPGDGNCFWHSVGFLLSTDGLALKAGI SFVESES+ DP+LS QTVL+QL DNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINP GRMSALFDITNEHIRHVEKIGNGPQSIKVDELR+VKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTS+IKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK+DLEMDD CKVAKAGKSK+EGWDVVTFEVFLRKI NLKAGHCVIFDEVQLFPPGY+DLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAF DYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFK+GG+LISHDSFHTDDRRW+TALSRFSHNLDLVNITG+SVE Subject 2965 LSKLLDVPRSKKQSILVLEGALAMDTGYGPKILGSFEVFKGDFNIKKIEDGSIFVISYRAPVRSPGKLRVHRTECSFSGSREVLLGCQIEASADYDIDDFNKFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESIADPALSTQTVLKQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFTDYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGVSVE 4935
Range 2: 2971 to 4932 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1105.8 bits(2407) | 0.0 | 488/654(75%) | 0/654(0%) | Plus/Minus |
Query 4 HADASNVYQVQVVAKAR*GRHPSTVISVE*VM*N*NSTIFEV*PC*FAKS*CELLHAKVRLHNLLLLKA*NQNRI*GGLRPSQKEVMHVVEDGIISECCSHGALLEMTWQSGLKHWIHKPPTLNVVPVGLTLK*SQYITLLSPQYCAILLGVICALTGITSK*NESITSYGQQTKVNIAWREQLNLIKNDAMACLQVCNFPKKHFKGHNVPTFFF*FTSLCHFATIIHFQVSFN*IG*SPSG*NKGYEFAFRPLHKALVQKAFTSSKGAKHDCQLSRFDIRS*YS*EPWLGIVKLLITYHTS*AS*QTPLQLFSPFKTWKVSYL*SIH*KEVKSRSFHSSQLIHLYTLRAVANLLNMSYMFVGYVK*S*HAPARIDDLNLPIDITLSTNVKCFESLSEIHHV*ATTLTQLFKYVICGGPAQIVKNIHFTSTKRRGDSCDHAAIQWSTRLKMI*LQA*DSTQRPLAISKLPTHLIFWGDND*PHMMPNAE*GYHFVLCISIITELPQNGLG*QRWIYKRFTFNERTYACFQSKPICTQQETH*MPKTVTITRYREFVKVINVIISRGFDLTTEQHFLGSRKRALRLVNSQLARRSHRSLVRYHEYGTIFNLLNVKVPFEHLERSQNLWSITGVDRKRAFKNYY*LLLTPRHI*QL 1965 HA SNVYQVQ+V KA *GR P T+IS+E*VM*N*NST+FEV P *F K *C+LLH KVRLHN L LKA NQN I*GGLRPSQKEVMH+V++GI+SE CSHGALL+MTWQSGLKHWIHKPP LN+VPVGL LK*SQY+TLLSP Y A+LLGVICALTG+TSK*NES+TSYG TKVN+A R++L+LIKN MACL + N +K+FKGHNVPTF *F LCHFATIIHFQV FN*I *SP G*NKGYE FRPLHKA VQKAF SK +KHDCQ RFDI S*Y *EPWLGI+K LITY+TS*AS*QT LQLFSP K WKVSYL SIH*KEVKSRSFH SQ IHLY LRA+ANLLN+SYMF+GYVK*S*HA ARI++LN I+ITL TNV+CFE LSE+HHV ATTL Q FK +ICG AQIVK+IH TS +RRG+S HAAIQW T LKMI*LQA +ST RPL ISK PTHLI WGDND PHMMPNAE*GYH VLCISI+ +L QN LG*Q WI FTFN+ TYA FQSKP+C QQETH*+PK VTITR+R+FVKVINVIISRG +LTTE +F K R V+SQ ARRSHRS VRY++YG IFN LNV+VPFE+L+RSQNL SI G+ K FK+ Y*LLL PRHI*QL Subject 2971 HAYTSNVYQVQIVTKA**GR*PPTIISME*VM*N*NSTMFEVQPR*FTKC*CKLLHTKVRLHNFLFLKARNQNGI*GGLRPSQKEVMHIVKNGIVSERCSHGALLKMTWQSGLKHWIHKPPALNIVPVGLALK*SQYVTLLSP*YRAVLLGVICALTGVTSK*NESVTSYG**TKVNVARRKKLDLIKNHTMACL*IFNLSEKYFKGHNVPTFSL*FACLCHFATIIHFQVLFN*IS*SPPG*NKGYELTFRPLHKAFVQKAFACSKSSKHDCQFPRFDI*S*YP*EPWLGIIKFLITYNTS*AS*QTSLQLFSPLKAWKVSYLRSIH*KEVKSRSFHFSQFIHLYALRAIANLLNVSYMFIGYVK*S*HASARINNLNFSINITLGTNVECFEGLSEVHHVQATTLAQFFKDMICGRSAQIVKDIHLTSAERRGNSGYHAAIQWGTGLKMI*LQAQNST*RPLTISKFPTHLILWGDNDQPHMMPNAE*GYHLVLCISIVAKLLQNCLG*QSWICNGFTFNK*TYASFQSKPVCAQQETH*VPKAVTITRHRKFVKVINVIISRGLNLTTE*YFSRP*KGTFRPVDSQFARRSHRSPVRYYKYGAIFNFLNVEVPFEYLKRSQNLRSIAGIHCKCTFKD*Y*LLLAPRHI*QL 4932
Range 3: 3462 to 4934 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1012.3 bits(2203) | 0.0 | 454/491(92%) | 0/491(0%) | Plus/Minus |
Query 2 STLMPVMFTKSKLWLKRDRAVIHLRSSVWNESCEIKTPPYLKFNPVDSPKVSVSCFMPK*DCTIFFSSKLETKIASKEVLDRAKRKSCMLWKMA*SANAAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVL*QGSPASEMKASLRMVNRQRSI*PGGNS*TSSKMTQWPAFRFAIFLRNTSKVTTSQPSFFDLPAFATXXXXXXXXXXXXXXARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLISEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTLLSSSTFILCGPLPIFSTCLICSLVMSNRADMRPPGLMTSISPLISHLAQMSNASKASARYIMFKPPP*HSSSNM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHRGHSLSPNFQLTSYSGVIMISLT*CLMQNK 1474 STL PVMFTKSKL LKRDRAV HLRSSVWNESCEIK PP LKF+PVDSP VSVSCF+PK*DCTIFFSSKLET++ASKEVLDRA+RKSC+L KMA*S NAAVMEPFLK*HGSLDSNIGFTNLRLS+LYL*DLPSSNLN+SLCSAPSIARSFWESYVL*QGSPASEMKASLRMVNRQRS *PGG S TSSK+TQWPAFRF+IFLRNTSKVTTSQPS FDLPAFATLQ SSIS+S LIELARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLI EVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFT LSSSTF+LCGPLPIFSTCLICSLVMSN+ADMRP GL+TSISPLISHLAQMSNASKASARYIMF+PPP H+SS +*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPH+GHSLSPNFQLTSYSGVIMISLT*CLMQNK Subject 3462 STLTPVMFTKSKL*LKRDRAVNHLRSSVWNESCEIKIPPCLKFSPVDSPNVSVSCFIPK*DCTIFFSSKLETRMASKEVLDRARRKSCIL*KMA*SVNAAVMEPFLK*HGSLDSNIGFTNLRLSILYL*DLPSSNLNMSLCSAPSIARSFWESYVL*QGSPASEMKASLRMVNRQRST*PGGKSWTSSKITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRSFLIELARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTFLSSSTFMLCGPLPIFSTCLICSLVMSNKADMRPLGLITSISPLISHLAQMSNASKASARYIMFRPPPWHNSSKI*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHKGHSLSPNFQLTSYSGVIMISLT*CLMQNK 4934
Range 4: 2967 to 3422 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
283.8 bits(613) | 0.0 | 137/152(90%) | 0/152(0%) | Plus/Minus |
Query 1514 CLKTVWADKDGSTRDSLSTKELMPAFKASPSVLNKKPTECQKQLPSPGTGNLLKXXXXXXXXXXI*QPSSTSLDPEKEHSVL*TLNLPEDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKTFGP*LVSIASAPSRTIIDCFLLLGTSSNFD 1969 C KTVW D+ GS DSLST E MPAFKASPSVLNKKPTECQKQLPSPGT NLLKSSMS*SAEASI*QPSSTSLDPEKEHSVL TLNLP DLTGAL*DITNMEPSSIFLMLKSPLNTSKDPK FGP* VSIASAPSRT IDCFLLLGTSSN D Subject 2967 CFKTVWVDRAGSAMDSLSTNERMPAFKASPSVLNKKPTECQKQLPSPGTENLLKSSMS*SAEASI*QPSSTSLDPEKEHSVLWTLNLPGDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKIFGP*PVSIASAPSRTSIDCFLLLGTSSNLD 3422
Range 5: 2972 to 4933 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1020.1 bits(2220) | 0.0 | 481/654(74%) | 0/654(0%) | Plus/Minus |
Query 3 PR*CQ*CLPSPSCG*SAIGPSSIYGHQCGMSHVKLKLHHI*SLTLLIRQKLV*VASCQSKTAXXXXXXXXXXXXXXRRS*TEPKGSHACCGRWHNQRMLQSWSPS*NDMAVWTQTLDSQTSDSQCCTCRTYPQVISIYHSAQPPVLRDPFGSHMCFDRDHQQVK*KHHFVWSTDKGQYSLEGTVEPHQK*RNGLPSGLQFS*ETLQRSQRPNLLFLIYQPLPLCNYHPFPSLF*LNWLEPFWVKQRLRICLQTSS*SSCTESFYQLQRCQARLSTLEI*YQKLIFLRAMAWNR*TXXXXXXXXXXXANTPAAFQPFQNLESKLSLIHSLKGGQEQIVSLFSAHPPLYSAGRCQSSQHVLYVRWLCQIELTCARQD**PQSPH*YHT*HKCQMLRKPQRDTSCLSHHLDTALQICDLWRACTDS*EHPLHVYQAQRR*L*SCSHSMEHKVENDLTASIRFHTEATRYLQTSNSPHILG***LASHDA*CRIRLSFRSLHKHYH*AASKRFGLTKMDLQEIHFQRKNLCLLSKQAHLYSTRNPLNAKNSYHHQVQGIC*SHQCHNQQRLRFDNRAALPWIQKKSTPSCELSTCQKISQEPCKISRIWNHLQSS*C*SPL*TPRKIPKPLVHNWCRSQARLQELLLIASYS*AHLAT 1964 PR Q*CLPSP+C *S IGP + Y HQ GMSHVKLK HH+*S LI Q LV*VAS QSKTAQ S PQS KP+ HLRRS*TEP+GSHA C +WH+Q LQSWSPS*NDMAVWTQTLDSQTS SQ CTCRT PQVISI H AQP V R PFGSHMCFDR HQQVK*K HFVW DKGQ S E PHQK NGLP Q *E LQRSQRPNLL LI PLPLCN+HPFP F*LN LEP WVKQRLR LQTSS*S CTESF LQ+ QARLS EI*Y KLI LRAMAWN * SHHL HQLSLLAN PAAFQP Q+LESKLS IHSLKGGQEQIVSLFS HPPL SAG CQSSQ VLYV WLCQI+LTC R D**PQ H*YHT HKC+MLR+PQR TSC HHL T LQ DLW+ CTDS* HP HV +AQR+* SCSHSM H+VENDL AS +FH +AT YLQ SNSPH LG*** ASHDA*CRIRLS RSLHKH ASK FGLT++DLQ IHFQ+ N+C LSKQA L STRNPL+AK+SYHHQ Q IC*SHQCHNQQR +FDNR L K++ PSC LS CQ+ISQEPCKI +IW+HLQ S*C*SPL* P+KIPK VH+ Q LQ L+LIAS S*AHLAT Subject 2972 PRLHQ*CLPSPNCD*SVIGPLTTYDHQYGMSHVKLKFHHV*SSAPLIHQMLV*VASYQSKTAQFSFPQSSKPEWHLRRS*TEPEGSHAYCEKWHSQ*TLQSWSPS*NDMAVWTQTLDSQTSGSQYCTCRTCPQVISICHFAQPLVSRGPFGSHMCFDRGHQQVK*KRHFVWLIDKGQRSQEEKAGPHQKSHNGLPLDFQSF*EILQRSQRPNLLSLICLPLPLCNHHPFPGPF*LN*LEPSWVKQRLRTYLQTSS*SFCTESFCLLQKFQARLSIPEI*YLKLISLRAMAWNH*ISHHL*HQLSLLANIPAAFQPSQSLESKLSSIHSLKGGQEQIVSLFSVHPPLCSAGHCQSSQRVLYVHWLCQIKLTCVR*D**PQFLH*YHTWHKCRMLRRPQRGTSCSGHHLGTILQRYDLWKVCTDS*GHPPHVCRAQRQ*RLSCSHSMGHRVENDLIASTKFHIKATHYLQISNSPHTLG***SASHDA*CRIRLSSRSLHKHCRQVASKLFGLTELDLQWIHFQQMNVCQLSKQARLCSTRNPLSAKSSYHHQAQKIC*SHQCHNQQRPQFDNRVVLL*TLKRNIPSCGLSICQEISQEPCKILQIWSHLQFS*C*SPL*IPQKIPKSSVHSRYPLQVHLQGLVLIASCS*AHLAT 4933
Range 6: 2973 to 4562 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
834.5 bits(1815) | 0.0 | 384/530(72%) | 0/530(0%) | Minus/Plus |
Query 374 VARCA*E*EAINNSS*RRACDRHQLWTKGFGIFRGVQRGL*H*ED*RWFHIRDILQGSCEIFWQVESSQDGVLFFWIQGSAARLSNRSLC*L*H**L*QIPCTW*W*LFLAFSGFLVEYRWACFESRHKFFR*K*ISCRSIFVSPNRFEAAQ**CLCRERNDSLILH*ASCEANHYHPRI*GELEVWR*RVASVWNLMLAVKSFSTLCSIEWLHDHSYRLCAW*T*SGCS*LSVQALHKSHI*RAVSRWWLKHDVSR*GFRSI*HLC*V*YQWGD*GHQSWRAHVSSI*HNQRTYKTC*EDWQRPAEYKGG*AEKSETICS*PPFNEWIKDNLLSKF*KG*KAAGVFARRLNWCDK**EV*RFQAMALRNINF*YQISRVDSRAWHLWSW*KLSVQELYEEV*RQIRNLCFTQKGSSQFN*KRLGNG**LQSGKGW*IKKRRLGRCDL*SVS*ENCKPEGRPLRHF**GSTVPSRLY*PLSVDHTK*CFHFTCW*SLSKHI*LPKGSRNTGG*AE*YIEIT*G*VLQVQH 1963 VARCA*E EAIN S *R C+ ++LWT+ FGIF G+QRGL H*E+*RW HI +ILQGSCEI WQ+ES QDG+ F + S RLSN LC*L*H**L*QI C W*W*L LA SGFLVE+R ACFES H F *K*I CRS V+PN FEA CLCRER+DSLILH*ASCEA+HYHPR+*GELE+WR* VA +WN +LA+KSFSTLC IEWLHD+ Y LCA T* GC *LSVQ HKS++*R V RWW +HDV R*G RSI HLC V*Y W +*G+ S R HVS I*HNQ TYKT *EDWQ PAE+KGG* EKSETICS*PPFNEWI+DNLLSK *+G*KAAG+FARRLNWC K**E+* FQAMALR+INF YQIS +DSRAW+ WS KLSVQ+LYEEV*R +RNLCFTQ+GSS FN*K GNG* LQSGKG IK+RRLGRCDL*S+S ++ K +GRPL F**G S L *PLS++HTK* FHFTCW* LSKHI*LPKG R+T G*A+*+IEIT*G VLQVQ+ Subject 2973 VARCA*EQEAINTSP*RCTCNGYRLWTEDFGIF*GIQRGLQH*EN*RWLHICNILQGSCEISWQIESPQDGMFLFRV*RSTTRLSN*GLC*L*H**L*QIFCAW*W*LLLALSGFLVEHRRACFESWHTFIC*K*IHCRSSSVNPNSFEATWRQCLCRERDDSLILH*ASCEADHYHPRV*GELEIWR**VAFMWNFVLAIKSFSTLCPIEWLHDNRYCLCARQT*GGCP*LSVQTFHKSYL*RIVPRWWPEHDVPR*GLRSIRHLCQV*Y*WRN*GY*S*RTHVSFI*HNQ*TYKTR*EDWQWPAEHKGG*TEKSETICS*PPFNEWIEDNLLSKL*EG*KAAGMFARRLNWCYK**EI**FQAMALRDINFKYQISGIDSRAWNFWSRQKLSVQKLYEEV*R*VRNLCFTQEGSS*FN*KGPGNG*WLQSGKGRQIKERRLGRCDL*SISQKD*KSKGRPLCDF**GPAFSSWLR*PLSINHTK*RFHFTCW*PLSKHI*LPKGPRDTRG*AK*HIEIT*GQVLQVQY 4562
Range 7: 4599 to 4934 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.9 bits(419) | 0.0 | 81/112(72%) | 0/112(0%) | Minus/Plus |
Query 2 QTAMSFQEGLHDCSIR*LCHLPQHA*LPFGSV*DLLRCDFGFKL*GEEDCAVLLWHEATHTNFWRINRVKLQIWWSFNFT*LIPH**P*MDDGPIAL*PQLGLGKHYWHQRG 337 QTAMSF EGLHDCS+ *LCH Q+A*LP GSV*DLLRC GF+L*G+E+CAVLLW+EAT+TN W IN +LQ WW+FNFT*LIP+** *+ +GPI L* Q GLGKHYW +RG Subject 4599 QTAMSF*EGLHDCSVH*LCHFSQYA*LPSGSV*DLLRCHSGFEL*GKENCAVLLWYEATYTNIW*INGAELQTWWNFNFT*LIPY**S*VVNGPITL*SQFGLGKHYWCKRG 4934
Range 8: 3902 to 4882 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
562.4 bits(1221) | 0.0 | 256/327(78%) | 0/327(0%) | Minus/Plus |
Query 54 WMS*EE*NDLLLTSFQ*MDQR*LTFQVLKGLKSCRGVC*EA*LV**VMRSLTIPSHGSQEYQLLISNLES*QSCLAPLELVKAFCTRAL*RGLKANS*PLFHPEGL*PIQLKETWKWMIVAKWQRLVNQKKKVGTL*PLKCFLGKLQT*RQAIASFLMRFNCSLQAILTFVC*PYEVMLSFHLLVIPVKAHMTPKRIAQYWGLSRVIY*DYLRVSPTGTTLRVGGL*IQCLSPDCHVISRRAP*LQHSLIMPSSTTCMTSFWLGLRPP*MRFWFQALRRRRLCSLTLA*SNSH*LLANQQG*TSNMVEF*FHMTHSTLMTVDG*RPY 1034 WM+*E+*NDLLLTSFQ*MD+R*LTFQ L+GLKSCR VC*EA*LV *VMR+L IPSHGSQ YQL ISNL +*QSCL LE KAFCT+AL*RGLK +S*PLFHP GL* IQLK TWKWM+VAKWQR NQ++KVGTL*PLK F +L+ *RQAI FLMR + L A LTFV *PYEV LSFHLLV PVKAHMTPKR A+Y GLS+V Y*DYLR SPTGT LR GGL*IQCLSPDCHVI RRAP*LQ SL MP T CMTSFWLGLRPP*M FWF+ALR+R+LCSLTL *SN H* L NQ+G*TSNMVEF*FHMTHS LM V G*RPY Subject 3902 WMN*EK*NDLLLTSFQ*MDRR*LTFQALRGLKSCRDVC*EA*LVL*VMRNLMIPSHGSQGYQLQISNLGN*QSCLELLEQAKAFCTKAL*RGLKVSS*PLFHPGGL*LIQLKRTWKWMMVAKWQRQANQREKVGTL*PLKYFSERLKI*RQAIV*FLMRSSFFLLATLTFVY*PYEVTLSFHLLVTPVKAHMTPKRTARY*GLSKVTY*DYLRASPTGTILRAGGL*IQCLSPDCHVILRRAP*LQRSLTMPFFTICMTSFWLGLRPP*MPFWFRALRKRKLCSLTLV*SNLH*HLVNQRG*TSNMVEF*FHMTHSILMIVGG*RPY 4882
Range 9: 2966 to 3862 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
406.6 bits(881) | 0.0 | 214/299(72%) | 0/299(0%) | Minus/Plus |
Query 1074 YQSC*MCLGVRSNQ**FLKARLRSTPVMDQRFWDLSRCSKGTLTLRRLKMVPYS*YXXXXXXXXLAS*EFTRRSALFLDPRKCCSVVKSKPLLIMTLMTLTNSLYLVMVTVFGIQWVSC*VQMGLL*KQA*VLSLKVNLL*IHLCQPKPF*GSSVIMLMQRTK**PYSALGIM*G*SLSPQNMR*VGSLEIASGLCVESYACSQIIFNLVLH*MAA*SQLSPLRLVDVKWMFLTICAGPPQITYLKSCVKVVA*T*CISLRLSKHLTFVLSVISMGRLRSSILAGACQLYLT*PTNI*D 1970 Y SC*MCLG RSNQ * LK L+ P MD+RFWDL R SKGT TLR+LKM PY *YLT LL*DLLA+*E T R+ F K SVVK +PLLIMTLMTLTN L LVMVT FG QWVSC* Q GLL*K A V LKVN L I LCQPK F* + MLMQRT+**PYSALGIM*G*SLSPQ+MR*VG+LEI SGL VE AC+QIIFN V H*MAA* L PLR DV+WM LTICA PQI LK+C KVVA*T*C SLR SKH TFV SVI M +LR ILA ACQLYLT*P NI*D Subject 2966 YLSC*MCLGARSNQY*SLKVHLQWIPAMDRRFWDLLRYSKGTSTLRKLKMAPYL*YLTGLL*DLLAN*ESTGRNVPFQGLEKYYSVVKLRPLLIMTLMTLTNFLCLVMVTAFGTQWVSC*AQTGLL*KLAYVHLLKVNPLQIQLCQPKQF*SNLATMLMQRTR**PYSALGIM*G*SLSPQSMR*VGNLEIVSGLYVEFCACNQIIFNPVPH*MAA**PLLPLRSADVRWMSLTICADLPQIISLKNCAKVVA*T*CTSLRPSKHSTFVPSVILMEKLRLLILADACQLYLT*PMNI*D 3862
Rupestris stem pitting associated virus isolate RSPaV PN, complete genome
Sequence ID: AY368172.2 Length: 8743 Number of Matches: 8
Range 1: 2965 to 4935 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1472.4 bits(3207) | 0.0 | 610/657(93%) | 0/657(0%) | Minus/Plus |
Query 1 VSKLLDVPRSKKQSIIVLEGALAIDTSYGPKVLGSFEVFKGDFNIKKIEDGSIFVISYKAPVRSSGKLRVHKTECSFSGSKEVLLGCQIEASADYDIDDFNKFPVPGDGNCFWHSVGFLLSTDGLALKAGISSFVESESLVDPSLSAQTVLRQLSDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPGGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRRVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSDIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKIANLKAGHCVIFDEVQLFPPGYIDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKYGGVLISHDSFHTDDRRWMTALSRFSHNLDLVNITGISVE 1971 +SKLLD+PRSKKQSI+VLEGAL +DTSYGPKVLGSFEVFKGDF++KKIEDGSIFVISY+APVRS GKLRVHKTECSFSGS+EVLLGCQIEASADYDIDDFNKF VP DGNCFWHSVGFLLSTDGLALKAGI SFVESESL D SLS+ VL+QL ++AYAENEMIALFCIRH VRLIIITPEYEVSWKFG+SEWPLCGILCL+SNHFQPCAPLNGCMITAIA+ALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIE+INPGGR+SALFDITNEHI HVEKIG GPQSIKVDELR+VKRSALDLLSMNGS+ITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLS IST DIK RELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKIA+LKAGHCVIFDEVQLFPPGYIDLCLLTIR+DAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEG+SY+YNIESRRFVNPMFE RLPCHFKKGSMTAAFADYAIFHNMHDFLLARSK+ LDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFK GG+LISHDSFH DDRRW+TALSRFSHNLDLVNITG+SVE Subject 2965 LSKLLDMPRSKKQSILVLEGALEMDTSYGPKVLGSFEVFKGDFSLKKIEDGSIFVISYRAPVRSPGKLRVHKTECSFSGSREVLLGCQIEASADYDIDDFNKFSVPRDGNCFWHSVGFLLSTDGLALKAGIRSFVESESLADSSLSSPAVLKQLGEDAYAENEMIALFCIRHQVRLIIITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIAAALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEIINPGGRISALFDITNEHIMHVEKIGTGPQSIKVDELRKVKRSALDLLSMNGSRITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSSISTVDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKIASLKAGHCVIFDEVQLFPPGYIDLCLLTIRNDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGRSYKYNIESRRFVNPMFECRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKSPLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKNGGILISHDSFHADDRRWLTALSRFSHNLDLVNITGVSVE 4935
Range 2: 3462 to 4934 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
945.0 bits(2056) | 0.0 | 424/491(86%) | 0/491(0%) | Plus/Minus |
Query 2 STLMPVMFTKSKLWLKRDRAVIHLRSSVWNESCEIKTPPYLKFNPVDSPKVSVSCFMPK*DCTIFFSSKLETKIASKEVLDRAKRKSCMLWKMA*SANAAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVL*QGSPASEMKASLRMVNRQRSI*PGGNS*TSSKMTQWPAFRFAIFLRNTSKVTTSQPSFFDLPAFATXXXXXXXXXXXXXXARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLISEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTLLSSSTFILCGPLPIFSTCLICSLVMSNRADMRPPGLMTSISPLISHLAQMSNASKASARYIMFKPPP*HSSSNM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHRGHSLSPNFQLTSYSGVIMISLT*CLMQNK 1474 STL PV+FTKSKL LKRD+AV HLRSS WNESCEIK PP+LKF PVDSP VSVSCFMPK*DCTIFFSSKLETK+ASK LDRA+RKSCMLWKMA*SANAAVMEPFLK*HGSL SNIG TNL LSMLYL*DLPSSNLNISLCSAP+IARSFWESYVL QGSPASE+KAS R+V++ RS+*PGGNS*TSSK+TQ PAF+ AIFLR TSKVTTSQPSFFDLPAFATLQLSSISKSLL+ELARALLGETKVTNLPSDLF+KLLY+KLLPAPKVPSTTVNSR LIS VDI ESHG ESLNFSSLITPV+PP+KHPC+FSALSKLGK*VI DPFIERRSRAD FT LSSSTF+LCGP+PIFSTC++CSLVMSN+ADMRPPG M SISPLISHLAQ+SNASKASARYI+ +PPP*HSSS M*FVEGLHR*LRTSTSRLPSA A+AVIMQPFNGAQG K*FD KH++PH+GHSLSPNFQLTSYSGVI+I+LT CL+QNK Subject 3462 STLTPVIFTKSKL*LKRDKAVNHLRSSAWNESCEIKIPPFLKFKPVDSPNVSVSCFMPK*DCTIFFSSKLETKMASKGDLDRARRKSCMLWKMA*SANAAVMEPFLK*HGSLHSNIGLTNLLLSMLYL*DLPSSNLNISLCSAPNIARSFWESYVLWQGSPASEIKASFRIVSKHRSM*PGGNS*TSSKITQ*PAFKLAIFLRKTSKVTTSQPSFFDLPAFATLQLSSISKSLLMELARALLGETKVTNLPSDLFMKLLYKKLLPAPKVPSTTVNSRGLISTVDILESHGFESLNFSSLITPVRPPNKHPCNFSALSKLGK*VILDPFIERRSRADLFTFLSSSTFMLCGPVPIFSTCIMCSLVMSNKADMRPPGFMISISPLISHLAQISNASKASARYIILRPPP*HSSSKM*FVEGLHR*LRTSTSRLPSAAAMAVIMQPFNGAQGWK*FDFKHRMPHKGHSLSPNFQLTSYSGVIIINLTWCLIQNK 4934
Range 3: 2967 to 3422 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
260.4 bits(562) | 0.0 | 128/152(84%) | 0/152(0%) | Plus/Minus |
Query 1514 CLKTVWADKDGSTRDSLSTKELMPAFKASPSVLNKKPTECQKQLPSPGTGNLLKXXXXXXXXXXI*QPSSTSLDPEKEHSVL*TLNLPEDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKTFGP*LVSIASAPSRTIIDCFLLLGTSSNFD 1969 C KT DKD S RDSLSTK+ +PAFKASPSVLN+KPTECQKQLPS GT NLLKSSMS*SAEASI QPSSTSLDPEKEHSVL TLNLP DLTGAL*DITN+EPSSIFL LKSPL TSKDPKTFGP*LVSI+SAPSRT IDCFLLLG S + D Subject 2967 CFKTAGEDKDESARDSLSTKDRIPAFKASPSVLNRKPTECQKQLPSRGTENLLKSSMS*SAEASIWQPSSTSLDPEKEHSVLWTLNLPGDLTGAL*DITNIEPSSIFLRLKSPLKTSKDPKTFGP*LVSISSAPSRTRIDCFLLLGISRSLD 3422
Range 4: 2980 to 4935 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
923.0 bits(2008) | 0.0 | 404/652(62%) | 0/652(0%) | Plus/Minus |
Query 1 FHADASNVYQVQVVAKAR*GRHPSTVISVE*VM*N*NSTIFEV*PC*FAKS*CELLHAKVRLHNLLLLKA*NQNRI*GGLRPSQKEVMHVVEDGIISECCSHGALLEMTWQSGLKHWIHKPPTLNVVPVGLTLK*SQYITLLSPQYCAILLGVICALTGITSK*NESITSYGQQTKVNIAWREQLNLIKNDAMACLQVCNFPKKHFKGHNVPTFFF*FTSLCHFATIIHFQVSFN*IG*SPSG*NKGYEFAFRPLHKALVQKAFTSSKGAKHDCQLSRFDIRS*YS*EPWLGIVKLLITYHTS*AS*QTPLQLFSPFKTWKVSYL*SIH*KEVKSRSFHSSQLIHLYTLRAVANLLNMSYMFVGYVK*S*HAPARIDDLNLPIDITLSTNVKCFESLSEIHHV*ATTLTQLFKYVICGGPAQIVKNIHFTSTKRRGDSCDHAAIQWSTRLKMI*LQA*DSTQRPLAISKLPTHLIFWGDND*PHMMPNAE*GYHFVLCISIITELPQNGLG*QRWIYKRFTFNERTYACFQSKPICTQQETH*MPKTVTITRYREFVKVINVIISRGFDLTTEQHFLGSRKRALRLVNSQLARRSHRSLVRYHEYGTIFNLLNVKVPFEHLERSQNLWSITGVDRKRAFKNYY*LLLTPRHI 1956 FH SN+YQV ++ KA P +I VE*VM*N*N I E+* * AK CELLHA+V L++LLL KA*NQN I*G LRPS +EVMHVVE+GII +CCSHGALLEMTWQS KHWI KPP LNV+ V K SQYITL SPQYCAILLGV+CAL G+T K*N+ I Y QQT++N+A RE LNLIKN M C CN P++ KG+N+PTF * SLCH ATIIHFQVSFN + *S G NK ++F FR LH+ LVQ+ F K AKH+C S DI S*Y+*EPWL I+K ITYHTS*A Q PLQLFSPFKTW+VSY * IH*KEVKS FH SQL+HLY LR NL NM Y+F+GYVK* *+A RI D N PIDIT S N++CFE LS +HH+ AT+LT LF+ VICGGPA +VKNIH TSTKR + CDHAA+QW TRL+MI* QA ++ QRPLA KLPT+ IF GDN+ PH++PN + GYH +LCISI T+L N QR I K TFN+R Y F S+PI QETH +P+ + +T YR+F++VINVIISR FDL T+QHF GSRKR R V+SQ R SHR +RYH+Y TIFNLL KV F++L+R Q+LW +T + K FK+ *L LT RHI Subject 2980 FHTYTSNIYQV*IMTKA*QSCQPPAIIGVE*VM*N*NPAILEI*AS*LAKCKCELLHAEVGLYDLLLFKA*NQNGI*GRLRPS*EEVMHVVENGIIGKCCSHGALLEMTWQSAFKHWIDKPPALNVILVRSAFKQSQYITLFSPQYCAILLGVVCALAGVTGK*NKGIIPYCQQTQINVARRE*LNLIKNYTMTCF*ACNLPEEDLKGYNIPTFLL*LASLCHLATIIHFQVSFNGVS*SSPGRNKSHKFTFRSLHETLVQETFACPKSAKHNC*FSGLDIHS*YT*EPWL*IIKFFITYHTS*APQQAPLQLFSPFKTWEVSYP*PIH*KEVKS*PFHFSQLVHLYALRTGTNLFNMHYVFIGYVK*G*YASTRIYDFNFPIDITFSANIECFEGLS*VHHIEATSLT*LFENVICGGPA*VVKNIHLTSTKRGSNGCDHAAVQWGTRLEMI*FQAQNAAQRPLAFPKLPTYFIFRGDNNQPHLVPNTKQGYHLILCISIFTKLL*NCWRGQR*IRKGLTFNKRPYTSF*SEPIRA*QETHRVPEAIAVTGYRKFIEVINVIISRSFDLATKQHFPGSRKRTFRFVDSQFTRGSHRGSIRYHKYRTIFNLLEAKVSFKNLKRPQDLWPVTCIHLKCTFKDEN*LFLTSRHI 4935
Range 5: 2967 to 4562 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
627.4 bits(1363) | 0.0 | 308/532(58%) | 0/532(0%) | Minus/Plus |
Query 374 IKVARCA*E*EAINNSS*RRACDRHQLWTKGFGIFRGVQRGL*H*ED*RWFHIRDILQGSCEIFWQVESSQDGVLFFWIQGSAARLSNRSLC*L*H**L*QIPCTW*W*LFLAFSGFLVEYRWACFESRHKFFR*K*ISCRSIFVSPNRFEAAQ**CLCRERNDSLILH*ASCEANHYHPRI*GELEVWR*RVASVWNLMLAVKSFSTLCSIEWLHDHSYRLCAW*T*SGCS*LSVQALHKSHI*RAVSRWWLKHDVSR*GFRSI*HLC*V*YQWGD*GHQSWRAHVSSI*HNQRTYKTC*EDWQRPAEYKGG*AEKSETICS*PPFNEWIKDNLLSKF*KG*KAAGVFARRLNWCDK**EV*RFQAMALRNINF*YQISRVDSRAWHLWSW*KLSVQELYEEV*RQIRNLCFTQKGSSQFN*KRLGNG**LQSGKGW*IKKRRLGRCDL*SVS*ENCKPEGRPLRHF**GSTVPSRLY*PLSVDHTK*CFHFTCW*SLSKHI*LPKGSRNTGG*AE*YIEIT*G*VLQVQH 1969 ++ + A*+*E IN+ *R D ++L KG G+F G R L* ED*RWF+I DIL CEI +ES Q+G+ FFWIQGSAA L NRS C*L*H**L I CT * L LA GF V++ WA F+S + F *K*+ C IFV + F+A * CLCRE +DSL+L+*A E ++YHP I* +LEVW RVA V + +L +KSF TLC IE LHDHS+ AW*T* GCS*L +QALHKSH RA+S W ++DV *G RSI +L *+*YQWG+* H+SW H+S I*HNQ T+ C*+DW R A++KGG AEKSE + S*PPFNEW+KDNLL KF*KG*K A V NWCDK**++* F+AMAL+ IN YQ R++S AWH W K VQE +EE+*R I + CF Q+ SS +*KRLGNG**LQ GKGW +K+ RLG C+L* + E+CK + R L +F**GST+PS L+* + D+T+*C +FTC * L KHI LP+GSRN GG* +*YIEI * +LQV H Subject 2967 VQTSGYA*K*ETINSRP*RCT*DGYKLRAKGLGVF*GF*RRL*PQED*RWFYICDIL*SPCEIPG*IESPQNGMFFFWIQGSAAWLPNRSFC*L*H**LQ*IFCTP*RQLLLALCGFPVKHGWARFKSWYTVFC*K*VPCGFIFVLSSSFKATW*RCLCRE*DDSLVLY*APSEVDYYHP*I*SKLEVWGKRVAFVRHSVLEIKSFPTLCPIERLHDHSHCCRAW*T*GGCS*LPMQALHKSHFRRAMSGRWPQYDVPS*GLRSIRYLR*M*YQWGN*NHKSWWTHISLI*HNQ*THNAC*KDWYRSAKHKGGRAEKSEKVSS*PPFNEWVKDNLLPKF*KG*KVARVLVGGPNWCDK**KI**FKAMALKYINCGYQAPRINSCAWHFWGRQKFLVQEFHEEI*R*ICDFCFAQESSS*LH*KRLGNG**LQGGKGWQVKEGRLGCCNL*GLPQEDCKLKSRSLCNF**GSTIPSWLH*SVFADNTE*CLYFTCR*PLPKHIRLPEGSRNIGG*TK*YIEIA*RQILQV*H 4562
Range 6: 4599 to 4934 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
153.2 bits(328) | 0.0 | 71/112(63%) | 0/112(0%) | Minus/Plus |
Query 2 QTAMSFQEGLHDCSIR*LCHLPQHA*LPFGSV*DLLRCDFGFKL*GEEDCAVLLWHEATHTNFWRINRVKLQIWWSFNFT*LIPH**P*MDDGPIAL*PQLGLGKHYWHQRG 337 QTAMSFQEGLHDCSI LCH PQHA*LP SV* LRC FGFKL* EED +LL HEA HT WR+N +K Q W FNFT*LIP * + D + L* LGK+YW + G Subject 4599 QTAMSFQEGLHDCSICRLCHFPQHA*LPPSSV*VSLRCHFGFKL*REEDRTILLRHEAAHTYIWRVNWLKFQEWRDFNFT*LIPRR*SQVVDSFVTL*S*FRLGKYYWCKCG 4934
Range 7: 2981 to 4921 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
752.5 bits(1636) | 0.0 | 391/647(60%) | 0/647(0%) | Plus/Minus |
Query 15 Q*CLPSPSCG*SAIGPSSIYGHQCGMSHVKLKLHHI*SLTLLIRQKLV*VASCQSKTAXXXXXXXXXXXXXXRRS*TEPKGSHACCGRWHNQRMLQSWSPS*NDMAVWTQTLDSQTSDSQCCTCRTYPQVISIYHSAQPPVLRDPFGSHMCFDRDHQQVK*KHHFVWSTDKGQYSLEGTVEPHQK*RNGLPSGLQFS*ETLQRSQRPNLLFLIYQPLPLCNYHPFPSLF*LNWLEPFWVKQRLRICLQTSS*SSCTESFYQLQRCQARLSTLEI*YQKLIFLRAMAWNR*TXXXXXXXXXXXANTPAAFQPFQNLESKLSLIHSLKGGQEQIVSLFSAHPPLYSAGRCQSSQHVLYVRWLCQIELTCARQD**PQSPH*YHT*HKCQMLRKPQRDTSCLSHHLDTALQICDLWRACTDS*EHPLHVYQAQRR*L*SCSHSMEHKVENDLTASIRFHTEATRYLQTSNSPHILG***LASHDA*CRIRLSFRSLHKHYH*AASKRFGLTKMDLQEIHFQRKNLCLLSKQAHLYSTRNPLNAKNSYHHQVQGIC*SHQCHNQQRLRFDNRAALPWIQKKSTPSCELSTCQKISQEPCKISRIWNHLQSS*C*SPL*TPRKIPKPLVHNWCRSQARLQELLLIASYS*AH 1955 Q* LPS + *S S+ H+ GMSHVKLK H *+L+ L RQ V* ASC+S+ +SSS QSLKPK HLR +*TE GSHACCG+WHN++MLQSWSPS*NDMAV QTLD QTS SQC TC+ Q ISIYH QPP+LRDP GS MCF R H+QVK*+HH V S + Q S EG VEPHQK N L LQ S* QR Q PNL L QPLP CNYHPFPSLF* + LE W KQ+ +I LQ SS*+SCT +F Q+CQA+L L *Y +LI+LRAMA N * HHLSHQL +T A FQPFQNL SKLSL HSLKGGQE SLFSA PPL A R QS QH L V WLCQI L C QD * Q PH*YH * K +MLR+PQ TS H D AL+ CDLWRAC S*EHP HVYQA+++ L*SCS SM HKV NDL +S T+ATR+ QTSN HI G*** S A* + RLS SLHKH H A K TKM+ Q HFQ+K + L K+AH T NP +A+++ H VQ I *SHQCHNQQ+LRF N+AALPWIQKK+ P C LS ISQ KIS+I NHLQSS* *S L* P+K P+PL N SQ LQ LI SY *A+ Subject 2981 Q*YLPSLNYD*SVTKLSTTCDHRRGMSHVKLKSRHS*NLSQLTRQM*V*AASCRSRIVRSSSLQSLKPKWHLRET*TELGGSHACCGKWHNRQMLQSWSPS*NDMAVCIQTLD*QTSCSQCYTCKICLQAISIYHFVQPPILRDPSGSRMCFGRGHRQVK*RHHSVLSANTDQCSQEGIVEPHQKLHNDLLLSLQSS*GRPQRLQHPNLPSLTCQPLPPCNYHPFPSLF*WS*LELSWAKQKSQIYLQISS*NSCTRNFCLPQKCQAQLLILGA*YPQLIYLRAMALNH*IFHHLSHQLGPPTSTLATFQPFQNLGSKLSLTHSLKGGQELTFSLFSARPPLCFADRYQSFQHALCVHWLCQIRLICVHQDL*FQFPH*YHI*RKYRMLRRPQLGTSY*GHLPDIALRKCDLWRACIGS*EHPPHVYQARQQWL*SCSRSMGHKVGNDLISSTECRTKATRFPQTSNLLHIQG***STSLGA*YKTRLSSHSLHKHLHQVALKLLERTKMNPQGTHFQQKTVYQLLKRAHPCLTGNPQSARSNCRHGVQKIY*SHQCHNQQKLRFGNQAALPWIQKKNIPFCGLSIYPGISQGLYKISQI*NHLQSS*G*SLL*KPQKTPRPLARNLYPSQVHLQGRELIVSYF*AY 4921
Range 8: 2981 to 4876 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
728.2 bits(1583) | 0.0 | 393/632(62%) | 0/632(0%) | Minus/Plus |
Query 60 MCLGVRSNQ**FLKARLRSTPVMDQRFWDLSRCSKGTLTLRRLKMVPYS*YXXXXXXXXLAS*EFTRRSALFLDPRKCCSVVKSKPLLIMTLMTLTNSLYLVMVTVFGIQWVSC*VQMGLL*KQA*VLSLKVNLL*IHLCQPKPF*GSSVIMLMQRTK**PYSALGIM*G*SLSPQNMR*VGSLEIASGLCVESYACSQIIFNLVLH*MAA*SQLSPLRLVDVKWMFLTICAGPPQITYLKSCVKVVA*T*CISLRLSKHLTFVLSVISMGRLRSSILAGACQLYLT*PTNI*DMXXXXXXXXXXXRWMS*EE*NDLLLTSFQ*MDQR*LTFQVLKGLKSCRGVC*EA*LV**VMRSLTIPSHGSQEYQLLISNLES*QSCLAPLELVKAFCTRAL*RGLKANS*PLFHPEGL*PIQLKETWKWMIVAKWQRLVNQKKKVGTL*PLKCFLGKLQT*RQAIASFLMRFNCSLQAILTFVC*PYEVMLSFHLLVIPVKAHMTPKRIAQYWGLSRVIY*DYLRVSPTGTTLRVGGL*IQCLSPDCHVISRRAP*LQHSLIMPSSTTCMTSFWLGLRPP*MRFWFQALRRRRLCSLTLA*SNSH*LLANQQG*TSNMVEF*FHMTHSTLMTVDG*R 1955 +CL VR+NQ LK LR V QR W L R K TL RRLKMV Y *YL L*D +*E T+R+ LFLDP KCC V KSK LLIMTLMT N LY V G WVSC* +MG L*K L LKV+ L IHLC + F* + V MLMQR +**P LG *G* LSP NM+*VGSL ASGLC A +QII NLV H* AA*SQ RLVDV+WMFLT AGPPQIT+ KS V+ VA *C LR SKH F L+VISMG+L+S IL A Q YLT*P N * ML+RL R+ *RW S*E+* LLTSFQ*M Q *LT QVLKGLKSC+G C A*LV**VM++L I SHGSQ YQL IS+ E+*Q CLA L K CTR *R LK N * LF P L* LKETWKWMIVA+WQRL +Q++KVG L*PL+ G+LQ *+Q I FLMRFN SL A L VC* Y +M FHL V P KAH TP+RIAQYWGL++VIY*D L+ T TLR GGL IQCL+ DCHVISRRAP*LQH IMP STTCMTS LGL P*M FWFQAL+RRR + T A*S+SH LA+Q * S M F*FHMTHST M G*+ Subject 2981 ICLEVRNNQFSSLKVHLRWIQVTGQRSWGLLRFLKETLASRRLKMVLYL*YLIEPL*DPRVN*ESTKRNVLFLDPGKCCLVAKSKLLLIMTLMTSINFLYPVTAIASGTLWVSC*ARMGSL*KLVYGLLLKVSPLRIHLCPLQQF*SNLVKMLMQRMR**PCFVLGTK*G*LLSPLNMK*VGSLGKASGLCAAFCA*NQIISNLVPH*TAA*SQPLLPRLVDVRWMFLTTYAGPPQITFSKSYVREVASI*CT*LRPSKHSIFALNVISMGKLKS*ILVDAYQPYLT*PMNT*CMLKRLVPVRKA*RWTS*EK*KGQLLTSFQ*MGQG*LTSQVLKGLKSCKGACWGA*LV**VMKNLMIQSHGSQVYQLWISSPEN*QLCLALLGQAKVSCTRVS*RDLKVNL*LLFRPGEL*LTPLKETWKWMIVARWQRLASQRRKVGML*PLRSSSGRLQA*KQVIV*FLMRFNYSLLATLICVC*QYGMMPLFHLPVTPAKAHTTPRRIAQYWGLNKVIY*DCLKADLTSITLRAGGLSIQCLNADCHVISRRAP*LQHLPIMPFSTTCMTSS*LGLSLP*MPFWFQALKRRRSYNPTSA*SSSHLHLASQLA*ISRMAGF*FHMTHSTPMIAGG*Q 4876
Nucleotide Sequence (675 letters)
Query ID: | ds2016-132_4 |
Query definition: | No definition line |
Query length: | 951 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
532.6 | 2826.2 | 31% | 2.045e-149 | 92% | KX274275.1 | |
523.9 | 2508.7 | 31% | 8.542e-147 | 79% | AY368590.1 | |
488.6 | 1549.3 | 28% | 3.569e-136 | 43% | JX559646.1 | |
488.1 | 1520.0 | 28% | 4.903e-136 | 42% | AY881626.1 | |
487.7 | 1531.9 | 28% | 6.736e-136 | 42% | KC427107.1 |
Alignments
Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome
Sequence ID: KX274275.1 Length: 8724 Number of Matches: 9
Range 1: 535 to 1203 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
532.6 bits(1156) | 0.0 | 222/223(100%) | 0/223(0%) | Minus/Plus |
Query 6 SLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVDSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLKARSVVLSDGSRYAVDVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL 674 SLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILV SPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLKARSVVLSDGSRYAVDVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL Subject 535 SLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVGSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLKARSVVLSDGSRYAVDVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL 1203
Range 2: 534 to 1202 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
484.5 bits(1051) | 0.0 | 216/223(97%) | 0/223(0%) | Plus/Minus |
Query 7 SREPLLPQLMTSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSKSLMPMASKPEKHRMLETRRLLIGVKLSK**QNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKSIWPSEILYW*AQGFKLSGESTRISGGITAVARSMLGLTTSRKVMRSRIDQ**ISSWRKRFLAPVEITRGTNFLSE 675 SREPLLPQLMTSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLC+PRLRGS+SLMPMASKPEKHRMLET+RLLIGVKL+K* QNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKSIWPSEILYW*AQGFKLSGE TRISGGITAVARSMLGLTTSRKVMRSRIDQ**ISS RKRFLAPVEITRGTNFLSE Subject 534 SREPLLPQLMTSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCIPRLRGSRSLMPMASKPEKHRMLETKRLLIGVKLNK*WQNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKSIWPSEILYW*AQGFKLSGEPTRISGGITAVARSMLGLTTSRKVMRSRIDQ**ISS*RKRFLAPVEITRGTNFLSE 1202
Range 3: 536 to 1207 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
457.9 bits(993) | 0.0 | 210/224(94%) | 0/224(0%) | Plus/Minus |
Query 2 SLVESHFFHNL*QVKQNPQ*I*SPFQLVCR*ADAISPRQIPYQAF*GFSNKDIF**QHHDAPGSSYACRDLEAPNP*CRWRQNQRNTEC*KLEDY*LG*SSVSDDRILNGGHRPHSVNHQIRPQT*L*ANTYLTMVVNTFHTSYHPEQRAFGPQKFYTGKPKGLSFQESXXXXXXXXXXXXEACWA*PLPGR**DHV*TSNEFHHGEKDSLHL*R*HEGPIS*A 673 +L ESHFFHNL*QVKQNPQ*I*SPFQLVCR*ADAISPRQI YQAF*GFSNKDIF**QHHDAP SSYA RDLEAP+P*CRWRQNQRNTEC*KL+DY*LG*SS+SD RILNGGHRPHSVNHQIRPQ *L*ANTYLTMVVNTFHTSYHPEQRAFGPQKFYTGKPKGLSFQESQQGFQGVLQ LQEACWA*PLPGR *DHV*TSNEFHH EKDSLHL*R HEGPIS*A Subject 536 ALAESHFFHNL*QVKQNPQ*I*SPFQLVCR*ADAISPRQILYQAF*GFSNKDIF**QHHDAPESSYAYRDLEAPDP*CRWRQNQRNTEC*KLKDY*LG*SSISDGRILNGGHRPHSVNHQIRPQI*L*ANTYLTMVVNTFHTSYHPEQRAFGPQKFYTGKPKGLSFQESQQGFQGVLQPLQEACWA*PLPGRL*DHV*TSNEFHHEEKDSLHL*RSHEGPIS*A 1207
Range 4: 877 to 1197 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
237.5 bits(512) | 0.0 | 103/107(96%) | 0/107(0%) | Plus/Minus |
Query 12 RATSSTTYDK*SKILNEFNLPSSWFVDKLTQFRLGRFLIRLFEGSQIKIYFSNNIMMHREAAMHAAT*RLQILNADGVKTRETPNVRN*KIIDWGEAQ*VMTEF*ME 332 RATSSTTYDK*SKILNEFNLPSSWFVDKLTQFRLGRF IRLFEGSQIKIYFSNNIMMHR+AAMH AT*RLQILNADGVKTRETPNVRN*KIIDWGEAQ*VM EF*ME Subject 877 RATSSTTYDK*SKILNEFNLPSSWFVDKLTQFRLGRFFIRLFEGSQIKIYFSNNIMMHRKAAMHTAT*RLQILNADGVKTRETPNVRN*KIIDWGEAQ*VMAEF*ME 1197
Range 5: 535 to 831 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
229.7 bits(495) | 0.0 | 94/99(95%) | 0/99(0%) | Plus/Minus |
Query 378 SFKQIPT*QWL*IHFTPVTIRSKEHLALRNSILVSPRV*AFRRVNKDFRGYYSCCKKHVGPNHFQEGDEITYRPVMNFIMEKKIPCTCRDNTRDQFLER 674 SFKQIPT*QWL*IHFTPVTIRSKEHLALRNSILVSPRV*AFRR NKDFRGYYS CKKHVGPNHFQEG EITYRPVMNFIM+KKIPCTCRD+TRDQFLER Subject 535 SFKQIPT*QWL*IHFTPVTIRSKEHLALRNSILVSPRV*AFRRANKDFRGYYSRCKKHVGPNHFQEGYEITYRPVMNFIMKKKIPCTCRDHTRDQFLER 831
Range 6: 735 to 1199 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
342.9 bits(742) | 0.0 | 147/155(95%) | 0/155(0%) | Minus/Plus |
Query 10 V*NF*GPNALCSGW*LV*NVFTTIVK*VFA*S*VCGLI*WFTLCGRCPPFKILSSLTELHPNQ*SSSF*HSVFLWF*RHRH*GFGASKSRHA*LLPGAS*CCY*NISLFENPQKA**GICRGEIASAYRQTNWKGD*IH*GFCFTCHKLWKKWLS 474 V*NF*GPNALCSGW*LV*NVFTTIVK*VFA*S*+CGLI*WFTLCGRCPPFKIL SL ELHPNQ*S SF*HSVFLWF*RHRH*G GASKSR+A*LL GAS*CCY*NISLFENPQKA** ICRGEIASAYRQTNWKGD*IH*GFCFTCHKLWKKWLS Subject 735 V*NF*GPNALCSGW*LV*NVFTTIVK*VFA*S*ICGLI*WFTLCGRCPPFKILPSLIELHPNQ*SFSF*HSVFLWF*RHRH*GSGASKSRYA*LLSGAS*CCY*NISLFENPQKA**RICRGEIASAYRQTNWKGD*IH*GFCFTCHKLWKKWLS 1199
Range 7: 536 to 685 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.9 bits(240) | 0.0 | 46/50(92%) | 0/50(0%) | Minus/Plus |
Query 524 RSRNWSLVLSLQVQGIFFSMMKFITGLYVISSPSWKWLGPTCFLQQL*YP 673 RSRNWSLV SLQVQGIFF MMKFITGLYVIS PSWKWLGPTCFLQ+L*YP Subject 536 RSRNWSLV*SLQVQGIFFFMMKFITGLYVIS*PSWKWLGPTCFLQRL*YP 685
Range 8: 737 to 1198 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
337.4 bits(730) | 0.0 | 149/154(97%) | 0/154(0%) | Minus/Plus |
Query 11 IEFLRAKCSLLRMVTGVKCIHNHCQVGICLKLGLWSYLMVHAMRSMSSIQNSVITY*ASPQSIIF*FLTFGVSLVLTPSALRIWSL*VAACIAASRCIMMLLLKYIFI*EPSKSLIRNLPRRNCVSLSTNQLEGRLNSLRILLHLS*VVEEVAL 472 IEFLRAKCSLLRMVTGVKCIHNHCQVGICLKL LWSYLMVHAMRSMSSIQNS ITY*ASPQSIIF*FLTFGVSLVLTPSALRIWSL*VA CIAA RCIMMLLLKYIFI*EPSKSLI+NLPRRNCVSLSTNQLEGRLNSLRILLHLS*VVEEVAL Subject 737 IEFLRAKCSLLRMVTGVKCIHNHCQVGICLKLDLWSYLMVHAMRSMSSIQNSAITY*ASPQSIIF*FLTFGVSLVLTPSALRIWSL*VAVCIAAFRCIMMLLLKYIFI*EPSKSLIKNLPRRNCVSLSTNQLEGRLNSLRILLHLS*VVEEVAL 1198
Rupestris stem pitting associated virus strain Syrah, complete genome
Sequence ID: AY368590.1 Length: 8742 Number of Matches: 9
Range 1: 535 to 1203 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
523.9 bits(1137) | 0.0 | 218/223(98%) | 0/223(0%) | Minus/Plus |
Query 6 SLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVDSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLKARSVVLSDGSRYAVDVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL 674 SLKKLVPRVIS GARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILV SPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLKA+SVVLSDGSRYAVDVLHSKFCHHLLSFTPI+NLLVSNIRCFSGFDAIGIKDLEPL RGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL Subject 535 SLKKLVPRVISAGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVGSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLKAKSVVLSDGSRYAVDVLHSKFCHHLLSFTPISNLLVSNIRCFSGFDAIGIKDLEPLIRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL 1203
Range 2: 534 to 1202 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
476.7 bits(1034) | 0.0 | 212/223(95%) | 0/223(0%) | Plus/Minus |
Query 7 SREPLLPQLMTSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSKSLMPMASKPEKHRMLETRRLLIGVKLSK**QNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKSIWPSEILYW*AQGFKLSGESTRISGGITAVARSMLGLTTSRKVMRSRIDQ**ISSWRKRFLAPVEITRGTNFLSE 675 SREPLLPQL+TSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPR+RGS+SLMPMASKPEKHRMLETRRLLIGVKL+K QNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKSIWPSEILYW*AQGFKLSGE TRISGGITAVARS+LGLTTSRKVMRSRIDQ* ISS RKRFLAP EITRGTNFLSE Subject 534 SREPLLPQLITSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRIRGSRSLMPMASKPEKHRMLETRRLLIGVKLNKWWQNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKSIWPSEILYW*AQGFKLSGEPTRISGGITAVARSILGLTTSRKVMRSRIDQ*WISS*RKRFLAPAEITRGTNFLSE 1202
Range 3: 539 to 1207 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
386.4 bits(837) | 0.0 | 183/223(82%) | 0/223(0%) | Plus/Minus |
Query 2 SLVESHFFHNL*QVKQNPQ*I*SPFQLVCR*ADAISPRQIPYQAF*GFSNKDIF**QHHDAPGSSYACRDLEAPNP*CRWRQNQRNTEC*KLEDY*LG*SSVSDDRILNGGHRPHSVNHQIRPQT*L*ANTYLTMVVNTFHTSYHPEQRAFGPQKFYTGKPKGLSFQESXXXXXXXXXXXXEACWA*PLPGR**DHV*TSNEFHHGEKDSLHL*R*HEGPIS* 670 +L SHFFHNL*Q KQN Q*I*S Q CR*ADAISPRQIPYQAF* FSN+ IF**QHHD P SSYACR+LEAP+ *CRWRQN+RNTEC*K EDY*LG*SS+S RILNG HRPHSVNH IRPQ L*ANTYLTMVVNTFHTSYHPEQRAFGPQ+FYTGKPK LSFQESQQGF V QLLQEA WA*PLPGR**DHV*T+N HH EKDSLH R HE PIS* Subject 539 ALAGSHFFHNL*QAKQNLQ*I*SLSQ*ACR*ADAISPRQIPYQAF*EFSNRGIF**QHHDVPESSYACRELEAPDL*CRWRQNRRNTEC*KPEDY*LG*SSISGGRILNGEHRPHSVNHPIRPQIWL*ANTYLTMVVNTFHTSYHPEQRAFGPQRFYTGKPKDLSFQESQQGFPEVSQLLQEAYWA*PLPGR**DHV*TNNGSHHEEKDSLHQRRSHEEPIS* 1207
Range 4: 538 to 828 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
210.5 bits(453) | 0.0 | 83/97(86%) | 0/97(0%) | Plus/Minus |
Query 381 FKQIPT*QWL*IHFTPVTIRSKEHLALRNSILVSPRV*AFRRVNKDFRGYYSCCKKHVGPNHFQEGDEITYRPVMNFIMEKKIPCTCRDNTRDQFLE 671 FKQIPT*QWL*IHFTPVTIRSKEHLALR+SILVSPR+*AFRR NKDFR Y+SCCKKH+GPNHFQEGDEITYRP+M+ IM+KKIPCT D+TR+QFLE Subject 538 FKQIPT*QWL*IHFTPVTIRSKEHLALRDSILVSPRI*AFRRANKDFRRYHSCCKKHIGPNHFQEGDEITYRPIMDLIMKKKIPCTSGDHTRNQFLE 828
Range 5: 877 to 1194 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
189.8 bits(408) | 0.0 | 84/106(79%) | 0/106(0%) | Plus/Minus |
Query 15 ATSSTTYDK*SKILNEFNLPSSWFVDKLTQFRLGRFLIRLFEGSQIKIYFSNNIMMHREAAMHAAT*RLQILNADGVKTRETPNVRN*KIIDWGEAQ*VMTEF*ME 332 ATSSTTY+K SKI NEFNL S VDKLTQFRLGRFLIRLF+ SQI++YFSNNIMM+R+AAMHAA *RLQI NADGVKT ETPNVRN KI +WG+AQ*V+ EF*ME Subject 877 ATSSTTYNKRSKIFNEFNLSPSRLVDKLTQFRLGRFLIRLFKSSQIEVYFSNNIMMYRKAAMHAAN*RLQIFNADGVKTGETPNVRNQKITNWGKAQ*VVAEF*ME 1194
Range 6: 735 to 1196 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
283.8 bits(613) | 0.0 | 127/154(82%) | 0/154(0%) | Minus/Plus |
Query 13 V*NF*GPNALCSGW*LV*NVFTTIVK*VFA*S*VCGLI*WFTLCGRCPPFKILSSLTELHPNQ*SSSF*HSVFLWF*RHRH*GFGASKSRHA*LLPGAS*CCY*NISLFENPQKA**GICRGEIASAYRQTNWKGD*IH*GFCFTCHKLWKKWL 474 V*N *GPNALCSGW*LV*NVFTTIVK*VFA*S +CGLI WFTLCGRC PFKIL L EL+PN *SS F*HSVFL F*RHRH* GAS SRHA*LL G S*CCY*NI LFEN KA**GICRGEIASAYRQ W+ D*IH* FCF C+KLWKKWL Subject 735 V*NL*GPNALCSGW*LV*NVFTTIVK*VFA*SQICGLIGWFTLCGRCSPFKILPPLIELYPN**SSGF*HSVFLRF*RHRH*RSGASNSRHA*LLSGTS*CCY*NIPLFENS*KA**GICRGEIASAYRQAYWERD*IH*RFCFACYKLWKKWL 1196
Range 7: 539 to 682 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
93.2 bits(197) | 0.0 | 39/48(81%) | 0/48(0%) | Minus/Plus |
Query 527 SRNWSLVLSLQVQGIFFSMMKFITGLYVISSPSWKWLGPTCFLQQL*Y 670 SRNW LV S VQGIFF MM+ I GLYVISSPSWKWLGP CFLQQL*Y Subject 539 SRNWFLV*SPLVQGIFFFMMRSIIGLYVISSPSWKWLGPICFLQQL*Y 682
Range 8: 737 to 1195 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
271.0 bits(585) | 0.0 | 126/153(82%) | 0/153(0%) | Minus/Plus |
Query 14 IEFLRAKCSLLRMVTGVKCIHNHCQVGICLKLGLWSYLMVHAMRSMSSIQNSVITY*ASPQSIIF*FLTFGVSLVLTPSALRIWSL*VAACIAASRCIMMLLLKYIFI*EPSKSLIRNLPRRNCVSLSTNQLEGRLNSLRILLHLS*VVEEVA 472 IE LRAKCSLLRMVTGVKCIHNHCQVGICLK LWSY MVHAMRSM SIQNS TY*A PQ +IF FLTFGVS VLTPSAL+IWSL* AACIAA R IMMLLLKY I*E KSLIRNLPRRNCVSLST+ L RLNSL+ILL L *VVEEVA Subject 737 IESLRAKCSLLRMVTGVKCIHNHCQVGICLKPNLWSYRMVHAMRSMFSIQNSATTY*ALPQLVIFWFLTFGVSPVLTPSALKIWSL*FAACIAAFRYIMMLLLKYTSI*ELLKSLIRNLPRRNCVSLSTSLLGERLNSLKILLRLL*VVEEVA 1195
Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome
Sequence ID: JX559646.1 Length: 8726 Number of Matches: 10
Range 1: 535 to 1203 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
488.6 bits(1060) | 0.0 | 198/223(89%) | 0/223(0%) | Minus/Plus |
Query 6 SLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVDSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLKARSVVLSDGSRYAVDVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL 674 +L++LVPRVISTGARNLFLHDEIHYWSI DLI FL+V +P+MLLATAVIPPE+LV SPESLNPWAYQY+IS+ Q+LFAPDGNW EMYSQPLS RYLLKARSVVL DGSRY+VD++HSKFCHHLLSFTPI NLL SN+RCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDF+SLVISCGRSGSLL Subject 535 TLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYKISDDQLLFAPDGNWNEMYSQPLSCRYLLKARSVVLPDGSRYSVDIIHSKFCHHLLSFTPIGNLLTSNMRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFSSLVISCGRSGSLL 1203
Range 2: 537 to 1202 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
372.7 bits(807) | 0.0 | 175/222(79%) | 0/222(0%) | Plus/Minus |
Query 7 SREPLLPQLMTSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSKSLMPMASKPEKHRMLETRRLLIGVKLSK**QNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKSIWPSEILYW*AQGFKLSGESTRISGGITAVARSMLGLTTSRKVMRSRIDQ**ISSWRKRFLAPVEITRGTNFLS 672 S+EPLLPQL+T+E KSSMN ISLPVGLSIS*R+FASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGS+S MP+ASKPEKH M E +RL +GVKLSK QNFE ST *REPS TTDLA SKYL D GCEYIS QLPSGAKS S ILY *AQG +LSGE T SGGITAVA+S+LGL TS+K +RS IDQ**ISS RKRFLAPVEITRGTN S Subject 537 SKEPLLPQLITNEEKSSMNFISLPVGLSIS*RSFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSRSFMPIASKPEKHLMFEVKRLPMGVKLSKWWQNFE*MISTE*REPSGSTTDLAFSKYLHDKGCEYISFQLPSGAKSS*SSLILY**AQGLRLSGEPTSTSGGITAVAKSILGLATSKKFIRSLIDQ**ISSCRKRFLAPVEITRGTNLRS 1202
Range 3: 547 to 831 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.9 bits(227) | 0.0 | 48/95(51%) | 0/95(0%) | Plus/Minus |
Query 378 SFKQIPT*QWL*IHFTPVTIRSKEHLALRNSILVSPRV*AFRRVNKDFRGYYSCCKKHVGPNHFQEGDEITYRPVMNFIMEKKIPCTCRDNTRDQ 662 S + + *Q L*+H PV I SKE L + N +L+ PRV AFRR N+ F G + C+KH +H QE +I PVMNFIM+KKIP TC ++ RDQ Subject 547 SLQ*VSA*QRL*VHLIPVAIWSKEQLIVTNFVLIGPRVKAFRRTNQHFWGDHRSCQKHTWLSHIQEIYQIAN*PVMNFIMQKKIPSTCGNHARDQ 831
Range 4: 880 to 1197 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
97.3 bits(206) | 0.0 | 49/106(46%) | 0/106(0%) | Plus/Minus |
Query 12 RATSSTTYDK*SKILNEFNLPSSWFVDKLTQFRLGRFLIRLFEGSQIKIYFSNNIMMHREAAMHAAT*RLQILNADGVKTRETPNVRN*KIIDWGEAQ*VMTEF*M 329 RAT T Y+ * KILNEF ++KLT+ L R L+ L + +K+Y NIMMH + +HA T*R +IL A +KTR+TP+V KI GEA+ V+ EF*+ Subject 880 RATPPTAYN**GKILNEFYFSPCGLINKLTKLCLSRLLVWLLKSP*VKVYLGYNIMMHWKTTVHATT*RFKILYAYCIKTRKTPHV*GQKIAYGGEAKQVVAEF*V 1197
Range 5: 759 to 1196 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
116.1 bits(247) | 0.0 | 63/146(43%) | 0/146(0%) | Minus/Plus |
Query 13 ALCSGW*LV*NVFTTIVK*VFA*S*VCGLI*WFTLCGRCPPFKILSSLTELHPNQ*SSSF*HSVFLWF*RHRH*GFGASKSRHA*LLPGAS*CCY*NISLFENPQKA**GICRGEIASAYRQTNWKGD*IH*GFCFTCHKLWKKWL 450 ALCS W L *+V TT V + *+CG * TL KIL L LHP++ S H VF WF* +RH G SKS HA L AS*CC +I L ++ +A G+C G+ +S Y + + + IH*GF +KLW++WL Subject 759 ALCSRWQLE*DVLTTFVMQILTEG*ICGTA*RLTLLS*YHSLKILPPLA*LHPHRQSFDLKHEVFFWF*CNRHKGS*TSKSWHAQLFSSAS*CCNQDIPLLKDS*EARQGVC*GKASSTY**AHRERNKIH*GFFLISYKLWEEWL 1196
Range 6: 539 to 685 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.4 bits(108) | 0.0 | 26/49(53%) | 0/49(0%) | Minus/Plus |
Query 524 SRNWSLVLSLQVQGIFFSMMKFITGLYVISSPSWKWLGPTCFLQQL*YP 670 S WS QV GIFF MMKFITG I SW WL CF Q * P Subject 539 SGGWSRA*FPQVLGIFFCMMKFITGQLAI**ISWMWLSQVCFWQLR*SP 685
Range 7: 542 to 1120 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
138.5 bits(296) | 0.0 | 85/193(44%) | 0/193(0%) | Plus/Minus |
Query 89 R*ADAISPRQIPYQAF*GFSNKDIF**QHHDAPGSSYACRDLEAPNP*CRWRQNQRNTEC*KLEDY*LG*SSVSDDRILNGGHRPHSVNHQIRPQT*L*ANTYLTMVVNTFHTSYHPEQRAFGPQKFYTGKPKGLSFQESXXXXXXXXXXXXEACWA*PLPGR**DHV*TSNEFHHGEKDSLHL*R*HEGPIS 667 +* D P+Q P A * +K I QHHDA ++ AC DLE +P C QNQ+NT C + +D G*S S RIL+ ++ SV+ Q PQ * + +T VV+T H+S H EQRA F T +PKG FQE+Q G L +A A*P P D TSNEFHH EKDS HL + GP S Subject 542 Q*VDEALPQQTPCLAS*ESLSKGISWLQHHDALENNCACHDLEVQDPLCLLHQNQKNTSCLRSKDCLWG*S*ASGGRILSE*YQLSSVSRQAVPQI*PSVSICMTKVVSTSHSSCHLEQRAADRH*FCTDRPKG*GFQENQPALLGGSPQLPKAYLA*PHPRNLSDR*LTSNEFHHAEKDS*HLWKSRAGPTS 1120
Range 8: 1145 to 1198 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
24.9 bits(48) | 0.0 | 10/18(56%) | 0/18(0%) | Plus/Minus |
Query 11 ESHFFHNL*QVKQNPQ*I 64 +SH H+L* +++NPQ*I Subject 1145 KSHSSHSL*LMRKNPQ*I 1198
Range 9: 758 to 1198 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
111.5 bits(237) | 0.0 | 67/147(46%) | 0/147(0%) | Minus/Plus |
Query 11 CSLLRMVTGVKCIHNHCQVGICLKLGLWSYLMVHAMRSMSSIQNSVITY*ASPQSIIF*FLTFGVSLVLTPSALRIWSL*VAACIAASRCIMMLLLKYIFI*EPSKSLIRNLPRRNCVSLSTNQLEGRLNSLRILLHLS*VVEEVAL 451 CSLL+M TG++C HN C +L LW L HA + +S QNS T ASP IF* T GV LVL A RI +L*V AC +CIMML +Y F * +S R+L R++ V+L + + NSLRI H * V VAL Subject 758 CSLLQMATGMRCTHNLCHADTY*RLDLWYCLTAHATQLISFTQNSATTCLASPP*AIF*PQT*GVFLVLMQ*A*RILNL*VVACTVVFQCIMML*PRYTFT*GLLRSQTRSLLRQSFVNLLISPQGEK*NSLRIFPH*L*AVGGVAL 1198
Rupestris stem pitting associated virus strain SG1, complete genome
Sequence ID: AY881626.1 Length: 8742 Number of Matches: 10
Range 1: 535 to 1203 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
488.1 bits(1059) | 0.0 | 198/223(89%) | 0/223(0%) | Minus/Plus |
Query 6 SLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVDSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLKARSVVLSDGSRYAVDVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL 674 +L++LVPRVISTGARNLFLHDEIHYWSI DLI FL+V +P+MLLATAVIPPE+LV SPESLNPWAYQY+IS+ Q+LFAPDGNW EMYSQPLS RYLLKARSVVL DGSRY VD++HSKFCHHLLSFTPI NLL SN+RCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDF+SLVISCGRSGSLL Subject 535 TLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYKISDDQLLFAPDGNWNEMYSQPLSCRYLLKARSVVLPDGSRYLVDIIHSKFCHHLLSFTPIGNLLTSNLRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFSSLVISCGRSGSLL 1203
Range 2: 537 to 1202 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
369.9 bits(801) | 0.0 | 174/222(78%) | 0/222(0%) | Plus/Minus |
Query 7 SREPLLPQLMTSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSKSLMPMASKPEKHRMLETRRLLIGVKLSK**QNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKSIWPSEILYW*AQGFKLSGESTRISGGITAVARSMLGLTTSRKVMRSRIDQ**ISSWRKRFLAPVEITRGTNFLS 672 S+EPLLPQL+T+E KSSMN ISLPVGLSIS*R+FASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGS+S MP+ASKPEKH E +RL +GVKLSK QNFE ST *REPS TTDLA SKYL D GCEYIS QLPSGAKS S ILY *AQG +LSGE T SGGITAVA+S+LGL TS+K +RS IDQ**ISS RKRFLAPVEITRGTN S Subject 537 SKEPLLPQLITNEEKSSMNFISLPVGLSIS*RSFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSRSFMPIASKPEKHLKFEVKRLPMGVKLSKWWQNFE*MISTK*REPSGSTTDLAFSKYLHDKGCEYISFQLPSGAKSS*SSLILY**AQGLRLSGEPTSTSGGITAVAKSILGLATSKKFIRSLIDQ**ISSCRKRFLAPVEITRGTNLRS 1202
Range 3: 547 to 831 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
107.4 bits(228) | 0.0 | 48/95(51%) | 0/95(0%) | Plus/Minus |
Query 378 SFKQIPT*QWL*IHFTPVTIRSKEHLALRNSILVSPRV*AFRRVNKDFRGYYSCCKKHVGPNHFQEGDEITYRPVMNFIMEKKIPCTCRDNTRDQ 662 S + + *Q L*+H PV I SKE L + N +L+ PRV AFRR N+ F G + C+KH +H QE +I PVMNFIM+KKIP TC ++ RDQ Subject 547 SLQ*VSA*QRL*VHLIPVAIWSKEQLIITNFVLIGPRVKAFRRTNQHFWGDHRSCQKHTWLSHIQEIYQIAN*PVMNFIMQKKIPSTCGNHARDQ 831
Range 4: 880 to 1197 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
92.3 bits(195) | 0.0 | 47/106(44%) | 0/106(0%) | Plus/Minus |
Query 12 RATSSTTYDK*SKILNEFNLPSSWFVDKLTQFRLGRFLIRLFEGSQIKIYFSNNIMMHREAAMHAAT*RLQILNADGVKTRETPNVRN*KIIDWGEAQ*VMTEF*M 329 RAT T Y+ * KILNEF ++KLT+ L R L+ L + +K+Y +IMMH + +HA *R +IL A +KTR+TP V KI GEA+ V+ EF*+ Subject 880 RATPPTAYN**GKILNEFYFSPCGLINKLTKLCLSRLLVWLLKSP*VKVYLGYDIMMHWKTTVHATA*RFKILYAYCIKTRKTPQV*GQKIAYGGEAKQVVAEF*V 1197
Range 5: 542 to 1120 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
133.5 bits(285) | 0.0 | 83/193(43%) | 0/193(0%) | Plus/Minus |
Query 89 R*ADAISPRQIPYQAF*GFSNKDIF**QHHDAPGSSYACRDLEAPNP*CRWRQNQRNTEC*KLEDY*LG*SSVSDDRILNGGHRPHSVNHQIRPQT*L*ANTYLTMVVNTFHTSYHPEQRAFGPQKFYTGKPKGLSFQESXXXXXXXXXXXXEACWA*PLPGR**DHV*TSNEFHHGEKDSLHL*R*HEGPIS 667 +* D P+Q P A * +K I +HHDA ++ AC LE +P C QNQ+NT + +D G*S S RIL+ ++P SV+ Q PQ * + +T VV+T H+S H EQRA F T +PKG FQE+Q G L +A A*P P D TSNEFHH EKDS HL + GP S Subject 542 Q*VDEALPQQTPCLAS*ESLSKGISWLRHHDALENNCACHGLEVQDPLCLLHQNQKNTSSLRSKDCLWG*S*ASGGRILSE*YQPSSVSRQAVPQI*PSVSICMTKVVSTSHSSCHLEQRAADHH*FCTDRPKG*GFQENQPALLGGSPQLPKAYLA*PHPRNLSDR*LTSNEFHHAEKDS*HLWKSRAGPTS 1120
Range 6: 1145 to 1198 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
24.9 bits(48) | 0.0 | 10/18(56%) | 0/18(0%) | Plus/Minus |
Query 11 ESHFFHNL*QVKQNPQ*I 64 +SH H+L* +++NPQ*I Subject 1145 KSHSSHSL*LMRKNPQ*I 1198
Range 7: 759 to 1196 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.0 bits(225) | 0.0 | 61/146(42%) | 0/146(0%) | Minus/Plus |
Query 13 ALCSGW*LV*NVFTTIVK*VFA*S*VCGLI*WFTLCGRCPPFKILSSLTELHPNQ*SSSF*HSVFLWF*RHRH*GFGASKSRHA*LLPGAS*CCY*NISLFENPQKA**GICRGEIASAYRQTNWKGD*IH*GFCFTCHKLWKKWL 450 ALCS W L *+V TT V + *+CG * TL G KIL L LHP++ S VF WF* +RH G SK HA L AS*C +I L ++ +A G+C G+ +S Y + + + IH*GF +KLW++WL Subject 759 ALCSRWQLE*DVLTTFVMQILTEG*ICGTA*RLTLLG*YHSLKILPPLA*LHPHRQSFDLKLEVFFWF*CNRHKGS*TSKPWHAQLFSSAS*CRNQDIPLLKDS*EARQGVC*GKASSTY**AHRERNKIH*GFFLISYKLWEEWL 1196
Range 8: 539 to 685 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.4 bits(108) | 0.0 | 26/49(53%) | 0/49(0%) | Minus/Plus |
Query 524 SRNWSLVLSLQVQGIFFSMMKFITGLYVISSPSWKWLGPTCFLQQL*YP 670 S WS QV GIFF MMKFITG I SW WL CF Q * P Subject 539 SGGWSRA*FPQVLGIFFCMMKFITGQLAI**ISWMWLSQVCFWQLR*SP 685
Range 9: 758 to 1198 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
105.1 bits(223) | 0.0 | 65/147(44%) | 0/147(0%) | Minus/Plus |
Query 11 CSLLRMVTGVKCIHNHCQVGICLKLGLWSYLMVHAMRSMSSIQNSVITY*ASPQSIIF*FLTFGVSLVLTPSALRIWSL*VAACIAASRCIMMLLLKYIFI*EPSKSLIRNLPRRNCVSLSTNQLEGRLNSLRILLHLS*VVEEVAL 451 CSLL+M TG++C HN C +L LW L HA +S QNS T ASP IF* T GV LVL A RI +L* AC +CIMM +Y F * +S R+L R++ V+L + + NSLRI H * V VAL Subject 758 CSLLQMATGMRCTHNLCHADTY*RLDLWYCLTAHATWLISFTQNSATTCLASPP*AIF*PQT*GVFLVLMQ*A*RILNL*AVACTVVFQCIMMS*PRYTFT*GLLRSQTRSLLRQSFVNLLISPQGEK*NSLRIFPH*L*AVGGVAL 1198
Grapevine rupestris stem pitting associated virus isolate GRSPaV WA, complete genome
Sequence ID: KC427107.1 Length: 8742 Number of Matches: 10
Range 1: 535 to 1203 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
487.7 bits(1058) | 0.0 | 198/223(89%) | 0/223(0%) | Minus/Plus |
Query 6 SLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVDSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLKARSVVLSDGSRYAVDVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL 674 +L++LVPRVISTGARNLFLHDEIHYWSI DLI FL+V +P+MLLATAVIPPE+LV SPESLNPWAYQY+IS+ Q+LFAPDGNW EMYSQPLS RYLLKARSVVL DGSRY VD++HSKFCHHLLSFTPI NLL SN+RCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDF+SLVISCGRSGSLL Subject 535 TLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYKISDDQLLFAPDGNWNEMYSQPLSCRYLLKARSVVLPDGSRYLVDIIHSKFCHHLLSFTPIGNLLTSNMRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFSSLVISCGRSGSLL 1203
Range 2: 537 to 1202 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
372.7 bits(807) | 0.0 | 175/222(79%) | 0/222(0%) | Plus/Minus |
Query 7 SREPLLPQLMTSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSKSLMPMASKPEKHRMLETRRLLIGVKLSK**QNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKSIWPSEILYW*AQGFKLSGESTRISGGITAVARSMLGLTTSRKVMRSRIDQ**ISSWRKRFLAPVEITRGTNFLS 672 S+EPLLPQL+T+E KSSMN ISLPVGLSIS*R+FASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGS+S MP+ASKPEKH M E +RL +GVKLSK QNFE ST *REPS TTDLA SKYL D GCEYIS QLPSGAKS S ILY *AQG +LSGE T SGGITAVA+S+LGL TS+K +RS IDQ**ISS RKRFLAPVEITRGTN S Subject 537 SKEPLLPQLITNEEKSSMNFISLPVGLSIS*RSFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSRSFMPIASKPEKHLMFEVKRLPMGVKLSKWWQNFE*MISTK*REPSGSTTDLAFSKYLHDKGCEYISFQLPSGAKSS*SSLILY**AQGLRLSGEPTSTSGGITAVAKSILGLATSKKFIRSLIDQ**ISSCRKRFLAPVEITRGTNLRS 1202
Range 3: 547 to 831 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.9 bits(227) | 0.0 | 48/95(51%) | 0/95(0%) | Plus/Minus |
Query 378 SFKQIPT*QWL*IHFTPVTIRSKEHLALRNSILVSPRV*AFRRVNKDFRGYYSCCKKHVGPNHFQEGDEITYRPVMNFIMEKKIPCTCRDNTRDQ 662 S + + *Q L*+H PV I SKE L + N +L+ PRV AFRR N+ F G + C+KH +H QE +I PVMNFIM+KKIP TC ++ RDQ Subject 547 SLQ*VSA*QRL*VHLIPVAIWSKEQLIVTNFVLIGPRVKAFRRTNQHFWGDHRSCQKHTWLSHIQEIYQIAN*PVMNFIMQKKIPSTCGNHARDQ 831
Range 4: 880 to 1197 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
92.7 bits(196) | 0.0 | 47/106(44%) | 0/106(0%) | Plus/Minus |
Query 12 RATSSTTYDK*SKILNEFNLPSSWFVDKLTQFRLGRFLIRLFEGSQIKIYFSNNIMMHREAAMHAAT*RLQILNADGVKTRETPNVRN*KIIDWGEAQ*VMTEF*M 329 RAT T Y+ * KILNEF ++KLT+ L R L+ L + +K+Y +IMMH + +HA *R +IL A +KTR+TP+V KI GEA+ V+ EF*+ Subject 880 RATPPTAYN**GKILNEFYFSPCGLINKLTKLCLSRLLVWLLKSP*VKVYLGYDIMMHWKTTVHATA*RFKILYAYCIKTRKTPHV*GQKIAYGGEAKQVVAEF*V 1197
Range 5: 759 to 1196 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
111.0 bits(236) | 0.0 | 62/146(42%) | 0/146(0%) | Minus/Plus |
Query 13 ALCSGW*LV*NVFTTIVK*VFA*S*VCGLI*WFTLCGRCPPFKILSSLTELHPNQ*SSSF*HSVFLWF*RHRH*GFGASKSRHA*LLPGAS*CCY*NISLFENPQKA**GICRGEIASAYRQTNWKGD*IH*GFCFTCHKLWKKWL 450 ALCS W L *+V TT V + *+CG * TL G KIL L LHP++ S H VF WF* +RH G SK HA L AS*C +I L ++ +A G+C G+ +S Y + + + IH*GF +KLW++WL Subject 759 ALCSRWQLE*DVLTTFVMQILTEG*ICGTA*RLTLLG*YHSLKILPPLA*LHPHRQSFDLKHEVFFWF*CNRHKGS*TSKPWHAQLFSSAS*CRNQDIPLLKDS*EARQGVC*GKASSTY**AHRERNKIH*GFFLISYKLWEEWL 1196
Range 6: 539 to 685 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.4 bits(108) | 0.0 | 26/49(53%) | 0/49(0%) | Minus/Plus |
Query 524 SRNWSLVLSLQVQGIFFSMMKFITGLYVISSPSWKWLGPTCFLQQL*YP 670 S WS QV GIFF MMKFITG I SW WL CF Q * P Subject 539 SGGWSRA*FPQVLGIFFCMMKFITGQLAI**ISWMWLSQVCFWQLR*SP 685
Range 7: 542 to 1120 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
138.1 bits(295) | 0.0 | 84/193(44%) | 0/193(0%) | Plus/Minus |
Query 89 R*ADAISPRQIPYQAF*GFSNKDIF**QHHDAPGSSYACRDLEAPNP*CRWRQNQRNTEC*KLEDY*LG*SSVSDDRILNGGHRPHSVNHQIRPQT*L*ANTYLTMVVNTFHTSYHPEQRAFGPQKFYTGKPKGLSFQESXXXXXXXXXXXXEACWA*PLPGR**DHV*TSNEFHHGEKDSLHL*R*HEGPIS 667 +* D P+Q P A * +K I +HHDA ++ AC LE +P C QNQ+NT C + +D G*S S RIL+ ++P SV+ Q PQ * + +T VV+T H+S H EQRA F T +PKG FQE+Q G L +A A*P P D TSNEFHH EKDS HL + GP S Subject 542 Q*VDEALPQQTPCLAS*ESLSKGISWLRHHDALENNCACHGLEVQDPLCLLHQNQKNTSCLRSKDCLWG*S*ASGGRILSE*YQPSSVSRQAVPQI*PSVSICMTKVVSTSHSSCHLEQRAADRH*FCTDRPKG*GFQENQPALLGGSPQLPKAYLA*PHPRNLSDR*LTSNEFHHAEKDS*HLWKSRAGPTS 1120
Range 8: 1145 to 1198 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
24.9 bits(48) | 0.0 | 10/18(56%) | 0/18(0%) | Plus/Minus |
Query 11 ESHFFHNL*QVKQNPQ*I 64 +SH H+L* +++NPQ*I Subject 1145 KSHSSHSL*LMRKNPQ*I 1198
Range 9: 758 to 1198 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
105.1 bits(223) | 0.0 | 65/147(44%) | 0/147(0%) | Minus/Plus |
Query 11 CSLLRMVTGVKCIHNHCQVGICLKLGLWSYLMVHAMRSMSSIQNSVITY*ASPQSIIF*FLTFGVSLVLTPSALRIWSL*VAACIAASRCIMMLLLKYIFI*EPSKSLIRNLPRRNCVSLSTNQLEGRLNSLRILLHLS*VVEEVAL 451 CSLL+M TG++C HN C +L LW L HA +S QNS T ASP IF* T GV LVL A RI +L* AC +CIMM +Y F * +S R+L R++ V+L + + NSLRI H * V VAL Subject 758 CSLLQMATGMRCTHNLCHADTY*RLDLWYCLTAHATWLISFTQNSATTCLASPP*AIF*PQT*GVFLVLMQ*A*RILNL*AVACTVVFQCIMMS*PRYTFT*GLLRSQTRSLLRQSFVNLLISPQGEK*NSLRIFPH*L*AVGGVAL 1198
Nucleotide Sequence (367 letters)
Query ID: | ds2016-132_4 |
Query definition: | No definition line |
Query length: | 951 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
293.4 | 1524.8 | 26% | 8.174e-78 | 91% | FR691076.1 | |
287.4 | 1321.5 | 17% | 5.077e-76 | 79% | KX925556.1 | |
287.0 | 1306.2 | 28% | 6.975e-76 | 80% | KX274276.1 | |
285.2 | 1048.0 | 20% | 2.485e-75 | 57% | KX958435.1 | |
284.2 | 1087.8 | 19% | 4.69e-75 | 58% | AY881627.1 |
Alignments
Grapevine rupestris stem pitting associated virus complete genome, genomic RNA, isolate GRSPaV MG
Sequence ID: FR691076.1 Length: 8749 Number of Matches: 8
Range 1: 1192 to 1557 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
293.4 bits(634) | 0.0 | 121/122(99%) | 0/122(0%) | Minus/Plus |
Query 2 GSLLMPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDITSDFFEHLFLFSCLSELIEENVEVVMDNSWFGLGDPQFNRQRAPFFLGSSYWLNSKFSVEHKFSGAI 367 GSLLMPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDIT DFFEHLFLFSCLSELIEENVEVVMDNSWFGLGDPQFNRQRAPFFLGSSYWLNSKFSVEHKFSGAI Subject 1192 GSLLMPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDITPDFFEHLFLFSCLSELIEENVEVVMDNSWFGLGDPQFNRQRAPFFLGSSYWLNSKFSVEHKFSGAI 1557
Range 2: 1192 to 1557 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
267.3 bits(577) | 0.0 | 117/122(96%) | 0/122(0%) | Plus/Minus |
Query 2 NGT*KLMLN*EFGVKPI*GPKEEWGPLTIELRIPKSKPRIIHDHLNVLLYQLAEAGEKK*MLKEIRSYIY*VNRKVKWLK*VNK*I**TLPKI*RKPGKSIWHHSAEE*YDQLRNVRHKQRA 367 NGT*KLMLN*EFGVKPI*GPKEEWGPLTIELRIPKSKPRIIHDHLNVLLYQLAEAGEKK*MLKEIRSY+Y VNRKV+WLK*VNK*I *TL KI*RKPGKSIWHHSAEE*YDQLRNVRHKQRA Subject 1192 NGT*KLMLN*EFGVKPI*GPKEEWGPLTIELRIPKSKPRIIHDHLNVLLYQLAEAGEKK*MLKEIRSYVYQVNRKVEWLK*VNK*IQ*TLSKI*RKPGKSIWHHSAEE*YDQLRNVRHKQRA 1557
Range 3: 1193 to 1555 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
260.0 bits(561) | 0.0 | 116/121(96%) | 0/121(0%) | Plus/Minus |
Query 4 WHLKTYAQLRIWS*ANMRTQGRMGPSDD*IADPQVQTKNYP*PPQRSPLSTR*GRRKEINAQRNQKLYLLS*PKS*MAQVSKQMNLVNTPENLKKAWQEHLASFGRRMI*PT*KC*A*AES 366 WHLKTYAQLRIWS*ANMRTQGRMGPSDD*IADPQVQTKNYP*PPQRSPLSTR*GRRKEINAQRNQ+L L S*PKS*MAQVSKQMN VNT ENLKKAWQEHLASFGRRMI*PT*KC*A*AES Subject 1193 WHLKTYAQLRIWS*ANMRTQGRMGPSDD*IADPQVQTKNYP*PPQRSPLSTR*GRRKEINAQRNQELCLPS*PKS*MAQVSKQMNPVNTLENLKKAWQEHLASFGRRMI*PT*KC*A*AES 1555
Range 4: 1194 to 1556 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
239.9 bits(522) | 0.0 | 119/121(98%) | 0/121(0%) | Plus/Minus |
Query 3 MAPENLCSTENLELSQYEDPRKNGAL*RLNCGSPSPNQELSMTTSTFSSINSLRQEKRNKCSKKSEVISTKLTEKLNGXXXXXXXXXXXXRKFEESLARAFGIIRQKNDMTNLEMLGISRE 365 MAPENLCSTENLELSQYEDPRKNGAL*RLNCGSPSPNQELSMTTSTFSSINSLRQEKRNKCSKKS V+STKLTEKLNGSSE*TNESSEHSRKFEESLARAFGIIRQKNDMTNLEMLGISRE Subject 1194 MAPENLCSTENLELSQYEDPRKNGAL*RLNCGSPSPNQELSMTTSTFSSINSLRQEKRNKCSKKSGVMSTKLTEKLNGSSE*TNESSEHSRKFEESLARAFGIIRQKNDMTNLEMLGISRE 1556
Range 5: 1379 to 1555 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
140.8 bits(301) | 0.0 | 59/59(100%) | 0/59(0%) | Minus/Plus |
Query 4 YFFSPASAS**RRTLRWSWIILGLDLGIRNSIVRGPHSSLGPHIGLTPNSQLSISFQVP 180 YFFSPASAS**RRTLRWSWIILGLDLGIRNSIVRGPHSSLGPHIGLTPNSQLSISFQVP Subject 1379 YFFSPASAS**RRTLRWSWIILGLDLGIRNSIVRGPHSSLGPHIGLTPNSQLSISFQVP 1555
Range 6: 1193 to 1345 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
117.5 bits(250) | 0.0 | 48/51(94%) | 0/51(0%) | Minus/Plus |
Query 214 ALCLCLTFLSWSYHSSAE*CQMLLPGFLQIFGSVH*IHLFTHLSHLTFRLT 366 ALCLCLTFLSWSYHSSAE*CQMLLPGFLQIF SVH IHLFTHLSH TFRLT Subject 1193 ALCLCLTFLSWSYHSSAE*CQMLLPGFLQIFESVHWIHLFTHLSHSTFRLT 1345
Range 7: 1194 to 1358 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
113.3 bits(241) | 0.0 | 50/55(91%) | 0/55(0%) | Minus/Plus |
Query 201 LSAYA*HF*VGHIILLPNDAKCSCQAFFKFSGVFTRFICLLT*AI*LFG*LSRYN 365 LSAYA*HF*VGHIILLPNDAKCSCQAFFKFS VFT FICLLT*AI LFG*L R+N Subject 1194 LSAYA*HF*VGHIILLPNDAKCSCQAFFKFSRVFTGFICLLT*AIQLFG*LGRHN 1358
Grapevine rupestris stem pitting associated virus isolate TEMP BR replicase, 24.4 kDa protein, 12.8 kDa protein, 8.4 kDa protein, and 28 kDa protein genes, complete cds
Sequence ID: KX925556.1 Length: 8700 Number of Matches: 8
Range 1: 1181 to 1546 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
287.4 bits(621) | 0.0 | 116/122(95%) | 0/122(0%) | Minus/Plus |
Query 2 GSLLMPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDITSDFFEHLFLFSCLSELIEENVEVVMDNSWFGLGDPQFNRQRAPFFLGSSYWLNSKFSVEHKFSGAI 367 GSLLMPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDIT DFFEHLFLFSCL+ELIEENVEV MDNSWFGLGDPQFNRQR PFFLGSSYWLNSKFS+EHKFSGA+ Subject 1181 GSLLMPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDITPDFFEHLFLFSCLNELIEENVEVAMDNSWFGLGDPQFNRQRTPFFLGSSYWLNSKFSIEHKFSGAV 1546
Range 2: 1183 to 1542 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.2 bits(494) | 0.0 | 112/120(93%) | 0/120(0%) | Plus/Minus |
Query 6 APENLCSTENLELSQYEDPRKNGAL*RLNCGSPSPNQELSMTTSTFSSINSLRQEKRNKCSKKSEVISTKLTEKLNGXXXXXXXXXXXXRKFEESLARAFGIIRQKNDMTNLEMLGISRE 365 APENLCS ENLELSQYEDPRKNG L RLNCGSPSPNQELSM TSTFSSINSLRQEKRNKCSKKS V+STKLTEKLNGSSE*T ESSEHSRKFEESLARAFGIIRQKNDMTNLEMLGIS+E Subject 1183 APENLCSIENLELSQYEDPRKNGVLWRLNCGSPSPNQELSMATSTFSSINSLRQEKRNKCSKKSGVMSTKLTEKLNGSSE*TKESSEHSRKFEESLARAFGIIRQKNDMTNLEMLGISKE 1542
Range 3: 1181 to 1546 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
224.2 bits(483) | 0.0 | 102/122(84%) | 0/122(0%) | Plus/Minus |
Query 2 NGT*KLMLN*EFGVKPI*GPKEEWGPLTIELRIPKSKPRIIHDHLNVLLYQLAEAGEKK*MLKEIRSYIY*VNRKVKWLK*VNK*I**TLPKI*RKPGKSIWHHSAEE*YDQLRNVRHKQRA 367 +GT*KLML EFGVKPI*GP+EEWGPL IEL + KSKPRIIH HLNVLLY L EA EK+*MLKEIRSY+Y*VNRKVKWLK*VNK I**TL KI*RKP K IWHHSAEE*YD L NVRHKQRA Subject 1181 DGT*KLMLYREFGVKPI*GPQEEWGPLAIELWVSKSKPRIIHGHLNVLLY*LIEAREKE*MLKEIRSYVY*VNRKVKWLK*VNKRI**TLSKI*RKPSKGIWHHSAEE*YD*LGNVRHKQRA 1546
Range 4: 1182 to 1541 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
199.9 bits(430) | 0.0 | 97/120(81%) | 0/120(0%) | Plus/Minus |
Query 7 HLKTYAQLRIWS*ANMRTQGRMGPSDD*IADPQVQTKNYP*PPQRSPLSTR*GRRKEINAQRNQKLYLLS*PKS*MAQVSKQMNLVNTPENLKKAWQEHLASFGRRMI*PT*KC*A*AES 366 HLKTYA RIWS*ANMRT GRMG D*I QVQTKNYP PPQRSPL T *G+RK INAQRNQ+L LLS*PKS*MAQVSKQ NLVNT ENLKKA Q HLASFGRRMI* T KC*A*A+S Subject 1182 HLKTYALSRIWS*ANMRTPGRMGSFGD*IVGLQVQTKNYPWPPQRSPLLTH*GKRKGINAQRNQELCLLS*PKS*MAQVSKQKNLVNTLENLKKA*QGHLASFGRRMI*LTWKC*A*AKS 1541
Range 5: 1368 to 1544 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
108.3 bits(230) | 0.0 | 47/59(80%) | 0/59(0%) | Minus/Plus |
Query 4 YFFSPASAS**RRTLRWSWIILGLDLGIRNSIVRGPHSSLGPHIGLTPNSQLSISFQVP 180 Y FS AS S**RRTLRW WIILGLDL NSI +GPHSS GPHIGLTPNS+ SISFQVP Subject 1368 YSFSLASMS**RRTLRWPWIILGLDLETHNSIAKGPHSSWGPHIGLTPNSR*SISFQVP 1544
Range 6: 1183 to 1347 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
104.6 bits(222) | 0.0 | 47/55(85%) | 0/55(0%) | Minus/Plus |
Query 201 LSAYA*HF*VGHIILLPNDAKCSCQAFFKFSGVFTRFICLLT*AI*LFG*LSRYN 365 L AYA*HF V HIILLPNDAKC C AFFKFS VFTRF CLLT*AI*LFG*LSR+N Subject 1183 LFAYA*HFQVSHIILLPNDAKCPC*AFFKFSRVFTRFFCLLT*AI*LFG*LSRHN 1347
Range 7: 1182 to 1337 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
100.0 bits(212) | 0.0 | 46/52(88%) | 0/52(0%) | Minus/Plus |
Query 211 ALCLCLTFLSWSYHSSAE*CQMLLPGFLQIFGSVH*IHLFTHLSHLTFRLT* 366 ALCLCLTF S SYHSSAE*CQM L GFLQIF SVH*I LFTHLSHLTFRLT* Subject 1182 ALCLCLTFPS*SYHSSAE*CQMPLLGFLQIFESVH*ILLFTHLSHLTFRLT* 1337
Range 8: 1384 to 1542 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
69.8 bits(146) | 0.0 | 42/53(79%) | 0/53(0%) | Minus/Plus |
Query 6 PQRVDRGER*GGHG*FLVWTWGSAIQSSEGPILPWVXXXXXXXXXXXA*VFRC 164 PQ V+RGER*GGHG*FLVWTW IQS + PILP VLILA*LQIL A*VFRC Subject 1384 PQ*VNRGER*GGHG*FLVWTWRPTIQSPKDPILPGVLILA*LQILDRA*VFRC 1542
Grapevine rupestris stem pitting associated virus isolate SK704 C, complete genome
Sequence ID: KX274276.1 Length: 8726 Number of Matches: 7
Range 1: 1193 to 1558 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
287.0 bits(620) | 0.0 | 118/122(97%) | 0/122(0%) | Minus/Plus |
Query 2 GSLLMPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDITSDFFEHLFLFSCLSELIEENVEVVMDNSWFGLGDPQFNRQRAPFFLGSSYWLNSKFSVEHKFSGAI 367 GSLLMPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDIT DFFEHLFLFSCL+ELIEENVEVVMDNSWFGLGD QFNRQRAPFFLGSSYWLNSKFSVEHKFSGA+ Subject 1193 GSLLMPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDITPDFFEHLFLFSCLNELIEENVEVVMDNSWFGLGDLQFNRQRAPFFLGSSYWLNSKFSVEHKFSGAV 1558
Range 2: 1195 to 1554 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
230.3 bits(501) | 0.0 | 115/120(96%) | 0/120(0%) | Plus/Minus |
Query 6 APENLCSTENLELSQYEDPRKNGAL*RLNCGSPSPNQELSMTTSTFSSINSLRQEKRNKCSKKSEVISTKLTEKLNGXXXXXXXXXXXXRKFEESLARAFGIIRQKNDMTNLEMLGISRE 365 APENLCSTENLELSQYEDPRKNGAL RLNC SPSPNQELSMTTSTFSSINSLRQEKRNKCSKKS V+STKLTEKLNGSSE*TNESSEHSRKFEESLARAFGIIRQKNDMTNLEMLGIS+E Subject 1195 APENLCSTENLELSQYEDPRKNGALWRLNCRSPSPNQELSMTTSTFSSINSLRQEKRNKCSKKSGVMSTKLTEKLNGSSE*TNESSEHSRKFEESLARAFGIIRQKNDMTNLEMLGISKE 1554
Range 3: 1193 to 1558 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
215.5 bits(464) | 0.0 | 99/122(81%) | 0/122(0%) | Plus/Minus |
Query 2 NGT*KLMLN*EFGVKPI*GPKEEWGPLTIELRIPKSKPRIIHDHLNVLLYQLAEAGEKK*MLKEIRSYIY*VNRKVKWLK*VNK*I**TLPKI*RKPGKSIWHHSAEE*YDQLRNVRHKQRA 367 N T*K MLN*EFG+KPI*GPKE+ PL IEL+IPKSKPRIIHDHLNVLLYQL EA EKK*+LKEIRS ++ +NR+VKWLK*VNK*I** L KI*RKP KSIWHHSAEE*YD LRNVRH RA Subject 1193 NCT*KFMLN*EFGIKPI*GPKEKRSPLAIELQIPKSKPRIIHDHLNVLLYQLIEAREKK*VLKEIRSDVHQINREVKWLK*VNK*I**ALSKI*RKPSKSIWHHSAEE*YD*LRNVRH**RA 1558
Range 4: 1194 to 1553 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
207.7 bits(447) | 0.0 | 97/120(81%) | 0/120(0%) | Plus/Minus |
Query 7 HLKTYAQLRIWS*ANMRTQGRMGPSDD*IADPQVQTKNYP*PPQRSPLSTR*GRRKEINAQRNQKLYLLS*PKS*MAQVSKQMNLVNTPENLKKAWQEHLASFGRRMI*PT*KC*A*AES 366 HLK YAQLRIW+*ANMRTQG+ PS D*IADPQVQTKNYP*PPQRSPLST *G+RKEI+AQRNQ+ +*P+S*MAQVSKQMNLV+T ENLKKA QEHLASFGRRMI* T*KC*A +S Subject 1194 HLKIYAQLRIWN*ANMRTQGKTEPSGD*IADPQVQTKNYP*PPQRSPLSTH*GKRKEISAQRNQE*CPPN*PRS*MAQVSKQMNLVSTLENLKKA*QEHLASFGRRMI*LT*KC*ALVKS 1553
Range 5: 1194 to 1553 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.9 bits(419) | 0.0 | 98/120(82%) | 0/120(0%) | Minus/Plus |
Query 7 ALCLCLTFLSWSYHSSAE*CQMLLPGFLQIFGSVH*IHLFTHLSHLTFRLT*XXXXXXXXXIYFFSPASAS**RRTLRWSWIILGLDLGIRNSIVRGPHSSLGPHIGLTPNSQLSISFQV 366 AL CLTFLS SYHSSAE*CQMLL GFLQIF S H*IHLFTHLSHLT RL LLISLS YFFS AS S**RRTLRWSWIILGLDLGI NSI RG SLGPHIGL PNSQLSI+FQV Subject 1194 ALY*CLTFLS*SYHSSAE*CQMLLLGFLQIFESAH*IHLFTHLSHLTSRLIWWTSLLISLSTYFFSLASMS**RRTLRWSWIILGLDLGICNSIARGLRFSLGPHIGLIPNSQLSINFQV 1553
Range 6: 1207 to 1359 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.4 bits(191) | 0.0 | 41/51(80%) | 0/51(0%) | Minus/Plus |
Query 201 A*HF*VGHIILLPNDAKCSCQAFFKFSGVFTRFICLLT*AI*LFG*LSRYN 353 A*HF*V HIILLPNDAKCSC AFFKFS V TRFICLLT*AI*L G* ++ Subject 1207 A*HF*VSHIILLPNDAKCSC*AFFKFSRVLTRFICLLT*AI*LLG*FGGHH 1359
Grapevine rupestris stem pitting associated virus isolate CS BR, complete genome
Sequence ID: KX958435.1 Length: 8743 Number of Matches: 7
Range 1: 1193 to 1558 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
285.2 bits(616) | 0.0 | 117/122(96%) | 0/122(0%) | Minus/Plus |
Query 2 GSLLMPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDITSDFFEHLFLFSCLSELIEENVEVVMDNSWFGLGDPQFNRQRAPFFLGSSYWLNSKFSVEHKFSGAI 367 GSLLMPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDIT+DFFEHLFLFSCL+ELIEENVE VMDNSWFGLGD QFNRQRAPFFLGSSYWLNSKFS+EHKFSGAI Subject 1193 GSLLMPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDITTDFFEHLFLFSCLNELIEENVEEVMDNSWFGLGDLQFNRQRAPFFLGSSYWLNSKFSIEHKFSGAI 1558
Range 2: 1195 to 1557 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
211.3 bits(459) | 0.0 | 104/121(86%) | 0/121(0%) | Plus/Minus |
Query 3 MAPENLCSTENLELSQYEDPRKNGAL*RLNCGSPSPNQELSMTTSTFSSINSLRQEKRNKCSKKSEVISTKLTEKLNGXXXXXXXXXXXXRKFEESLARAFGIIRQKNDMTNLEMLGISRE 365 MAPENLCS ENLELSQYEDPRKNGAL*RLNC SPSPNQELS+T+STFSSI+SLRQEKRNKCSKKS VISTKLTEKL GS E TNESSEHSRKFEESLA A GIIRQK D+TNLE+ G+S+E Subject 1195 MAPENLCSIENLELSQYEDPRKNGAL*RLNCKSPSPNQELSITSSTFSSISSLRQEKRNKCSKKSVVISTKLTEKLKGSREYTNESSEHSRKFEESLASALGIIRQKKDITNLEIFGMSKE 1557
Range 3: 1194 to 1556 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
155.5 bits(333) | 0.0 | 76/121(63%) | 0/121(0%) | Plus/Minus |
Query 4 WHLKTYAQLRIWS*ANMRTQGRMGPSDD*IADPQVQTKNYP*PPQRSPLSTR*GRRKEINAQRNQKLYLLS*PKS*MAQVSKQMNLVNTPENLKKAWQEHLASFGRRMI*PT*KC*A*AES 366 WHLK YAQL+IW+*ANM+TQGR G SDD*IA+P+ QT+N P*P Q SP *G+++EINA+RNQ Y LS* +S* AQ + QMN VNT NLK+A Q H ASFGRR I P *+ A*A++ Subject 1194 WHLKIYAQLKIWN*ANMKTQGRTGLSDD*IANPRAQTRNCP*PLQHSPRLVH*GKKREINARRNQ**YPLS*LRS*RAQGNTQMNPVNTLGNLKRA*QVH*ASFGRRKISPI*RYSA*AKN 1556
Range 4: 1196 to 1558 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
151.4 bits(324) | 0.0 | 73/121(60%) | 0/121(0%) | Plus/Minus |
Query 2 NGT*KLMLN*EFGVKPI*GPKEEWGPLTIELRIPKSKPRIIHDHLNVLLYQLAEAGEKK*MLKEIRSYIY*VNRKVKWLK*VNK*I**TLPKI*RKPGKSIWHHSAEE*YDQLRNVRHKQR 364 NGT*K MLN*+FG++PI* PKEE G LTIEL+IP+ KP I+H+ N+LL +A ++K*ML+EI S I+*V+ +VK LK ++K*I *TL +I*R+P K I HHSAEE Y Q R++RH+QR Subject 1196 NGT*KFMLN*KFGIEPI*RPKEERGSLTIELQIPEPKPGIVHNLFNILLD*FIKARKEK*MLEEISSDIH*VD*EVKGLKGIHK*IQ*TLSEI*REPSKCIRHHSAEERYHQFRDIRHEQR 1558
Range 5: 1197 to 1556 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
118.4 bits(252) | 0.0 | 73/120(61%) | 0/120(0%) | Minus/Plus |
Query 4 LCLCLTFLSWSYHSSAE*CQMLLPGFLQIFGSVH*IHLFTHLSHLTFRLT*XXXXXXXXXIYFFSPASAS**RRTLRWSWIILGLDLGIRNSIVRGPHSSLGPHIGLTPNSQLSISFQVP 363 LC C L+W Y SSAE*C M L G LQI SVH IHL LS LT + T* I LLIS SIYF A +* RR L+ W I GL GI NSIVR P SSLG HIG PN QLSI+FQVP Subject 1197 LCSCRISLNW*YLSSAE*CLMHLLGSLQISESVHWIHLCIPLSPLTSQST*WISLLISSSIYFSFLALMN*SRRMLKRLWTIPGLGSGICNSIVREPRSSLGLHIGSIPNFQLSINFQVP 1556
Range 6: 1201 to 1359 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
64.8 bits(135) | 0.0 | 30/53(57%) | 0/53(0%) | Minus/Plus |
Query 201 AYA*HF*VGHIILLPNDAKCSCQAFFKFSGVFTRFICLLT*AI*LFG*LSRYN 359 A+A + *+G I LLPNDA C+C A FKF VFT FIC+ *A+*L LS Y+ Subject 1201 AHAEYL*IGDIFLLPNDA*CTC*ALFKFPRVFTGFICVFP*AL*LLSQLSGYH 1359
Range 7: 1408 to 1557 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
61.6 bits(128) | 0.0 | 34/50(68%) | 0/50(0%) | Minus/Plus |
Query 3 DRGER*GGHG*FLVWTWGSAIQSSEGPILPWVXXXXXXXXXXXA*VFRCH 152 +RGE * G+G FLVW G AIQSSE P+LPWV ILA QI +*A*+FRCH Subject 1408 NRGEC*RGYGQFLVWARGFAIQSSESPVLPWVFILAQFQIFN*A*IFRCH 1557
Rupestris stem pitting associated virus strain BS, complete genome
Sequence ID: AY881627.1 Length: 8743 Number of Matches: 7
Range 1: 1192 to 1557 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
284.2 bits(614) | 0.0 | 117/122(96%) | 0/122(0%) | Minus/Plus |
Query 2 GSLLMPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDITSDFFEHLFLFSCLSELIEENVEVVMDNSWFGLGDPQFNRQRAPFFLGSSYWLNSKFSVEHKFSGAI 367 GSLLMPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDIT DFFEHLFLFSCL+ELIEENVE VMDNSWFGLGD QFNRQRAPFFLGSSYWLNSKFS+EHKFSGAI Subject 1192 GSLLMPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDITPDFFEHLFLFSCLNELIEENVEEVMDNSWFGLGDLQFNRQRAPFFLGSSYWLNSKFSIEHKFSGAI 1557
Range 2: 1194 to 1556 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
211.3 bits(459) | 0.0 | 104/121(86%) | 0/121(0%) | Plus/Minus |
Query 3 MAPENLCSTENLELSQYEDPRKNGAL*RLNCGSPSPNQELSMTTSTFSSINSLRQEKRNKCSKKSEVISTKLTEKLNGXXXXXXXXXXXXRKFEESLARAFGIIRQKNDMTNLEMLGISRE 365 MAPENLCS ENLELSQYEDPRKNGAL*RLNC SPSPNQELS+T+STFSSI+SLRQEKRNKCSKKS VISTKLTEKL GS E TNESSEHSRKFEESLA A GIIRQK D+TNLE+ G+S+E Subject 1194 MAPENLCSIENLELSQYEDPRKNGAL*RLNCKSPSPNQELSITSSTFSSISSLRQEKRNKCSKKSGVISTKLTEKLKGSREYTNESSEHSRKFEESLASALGIIRQKKDITNLEIFGMSKE 1556
Range 3: 1192 to 1557 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
164.2 bits(352) | 0.0 | 79/122(65%) | 0/122(0%) | Plus/Minus |
Query 2 NGT*KLMLN*EFGVKPI*GPKEEWGPLTIELRIPKSKPRIIHDHLNVLLYQLAEAGEKK*MLKEIRSYIY*VNRKVKWLK*VNK*I**TLPKI*RKPGKSIWHHSAEE*YDQLRNVRHKQRA 367 NGT*K MLN*+FG++PI* PKEE G LTIEL+IP+ KPRI+H+ N+LL EA ++K*MLKEIRS I+*V+ +VK LK ++K*I *TL +I*R+P K I HHSAEE Y Q RN+RH+QRA Subject 1192 NGT*KFMLN*KFGIEPI*RPKEERGSLTIELQIPEPKPRIVHNLFNILLD*FIEARKEK*MLKEIRSDIH*VD*EVKGLKGIHK*IQ*TLSEI*REPSKCIRHHSAEERYYQFRNIRHEQRA 1557
Range 4: 1193 to 1555 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
163.7 bits(351) | 0.0 | 80/121(66%) | 0/121(0%) | Plus/Minus |
Query 4 WHLKTYAQLRIWS*ANMRTQGRMGPSDD*IADPQVQTKNYP*PPQRSPLSTR*GRRKEINAQRNQKLYLLS*PKS*MAQVSKQMNLVNTPENLKKAWQEHLASFGRRMI*PT*KC*A*AES 366 WHLK YAQL+IW+*ANM+TQGR G SDD*IA+P+ QTKN P*P Q SP *G+++EINAQRNQ+ Y LS* +S* AQ + QMN VNT NLK+A Q H ASFGRR I P *K A*A+S Subject 1193 WHLKIYAQLKIWN*ANMKTQGRTGLSDD*IANPRAQTKNCP*PLQHSPRLVH*GKKREINAQRNQE*YPLS*LRS*RAQGNTQMNPVNTLGNLKRA*QVH*ASFGRRKILPI*KYSA*AKS 1555
Range 5: 1193 to 1555 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
129.8 bits(277) | 0.0 | 78/121(64%) | 0/121(0%) | Minus/Plus |
Query 4 ALCLCLTFLSWSYHSSAE*CQMLLPGFLQIFGSVH*IHLFTHLSHLTFRLT*XXXXXXXXXIYFFSPASAS**RRTLRWSWIILGLDLGIRNSIVRGPHSSLGPHIGLTPNSQLSISFQVP 366 ALC C FL+W Y SSAE*C M L G LQI SVH IHL LS LT + T* I LLISLSIYF AS +* RR L+ W ILGL GI NSIVR P SSLG HIG PN QLSI+FQVP Subject 1193 ALCSCRIFLNW*YLSSAE*CLMHLLGSLQISESVHWIHLCIPLSPLTSQST*WISLLISLSIYFSFLASMN*SRRMLKRLWTILGLGSGICNSIVREPRSSLGLHIGSIPNFQLSINFQVP 1555
Range 6: 1194 to 1358 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
69.3 bits(145) | 0.0 | 32/55(58%) | 0/55(0%) | Minus/Plus |
Query 201 LSAYA*HF*VGHIILLPNDAKCSCQAFFKFSGVFTRFICLLT*AI*LFG*LSRYN 365 L A+A +F*+G+I LLPNDA C+C A FKF VFT FIC+ *A+*L LS Y+ Subject 1194 LFAHAEYF*IGNIFLLPNDA*CTC*ALFKFPRVFTGFICVFP*AL*LLSQLSGYH 1358
Range 7: 1395 to 1556 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
65.2 bits(136) | 0.0 | 36/54(67%) | 0/54(0%) | Minus/Plus |
Query 3 PQRVDRGER*GGHG*FLVWTWGSAIQSSEGPILPWVXXXXXXXXXXXA*VFRCH 164 PQ +RGE * G+G FLVW G AIQSSE P+LPWV ILA QI +*A*+FRCH Subject 1395 PQ*TNRGEC*RGYGQFLVWARGFAIQSSESPVLPWVFILAQFQIFN*A*IFRCH 1556
Nucleotide Sequence (941 letters)
Query ID: | ds2016-132_4 |
Query definition: | No definition line |
Query length: | 951 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
379.5 | 2461.6 | 34% | 0 | 50% | KX925556.1 | |
379.5 | 2413.5 | 36% | 0 | 49% | JX559646.1 | |
393.8 | 2436.9 | 25% | 0 | 49% | KR528585.1 | |
693.4 | 3904.7 | 33% | 0 | 93% | KX274275.1 | |
606.4 | 3444.6 | 35% | 0 | 73% | AY368590.1 |
Alignments
Grapevine rupestris stem pitting associated virus isolate TEMP BR replicase, 24.4 kDa protein, 12.8 kDa protein, 8.4 kDa protein, and 28 kDa protein genes, complete cds
Sequence ID: KX925556.1 Length: 8700 Number of Matches: 13
Range 1: 5177 to 5683 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
379.5 bits(822) | 0.0 | 156/169(92%) | 0/169(0%) | Plus/Plus |
Query 423 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMLEAVREFEEKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHHTK 929 WFKTHIPLSNLESTRARWVGKMALKEHREVRCG+E TQQFFDEHR G EQLSNACERFESIYPRHKGNDS+TFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLD+FLSKVPLNASHN+N++ EAVREFE KKASKSAATIENHSGRSCRDWLLDVALIFMKSQH TK Subject 5177 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGHEVTQQFFDEHRGGAGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKVPLNASHNSNMLNEAVREFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTK 5683
Range 2: 4763 to 5125 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
295.7 bits(639) | 0.0 | 118/121(98%) | 0/121(0%) | Plus/Plus |
Query 9 LTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVSVGRNEGVREEKLCGDPWLKVMLFLGQ 371 LTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVS+G+NEG+REEKLCGDPWLKVMLFLGQ Subject 4763 LTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVSLGKNEGIREEKLCGDPWLKVMLFLGQ 5125
Range 3: 5176 to 5682 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
292.9 bits(633) | 0.0 | 132/169(78%) | 0/169(0%) | Minus/Minus |
Query 422 LVWC*DFIKIRATSSNQSLQDLPE*FSIVAALLLAFFSSNSRTASSIRFALWLAFSGTFERKVSSRNFPYGFARLNLAAST*GFENFRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSKLLNGIWVLNH 928 LV C DFIKIRATS++QSL DLPE FSIVAALLLAFF+SNS TAS L LAFSGT +RK SS+NFPYGFARLNLAAST GFEN RRF TAMRKV ES PLCLG MLSNLSHALL+CS P LCSSKNC V S P TSRCSF AI PTHLALVDSKLL G+WVLNH Subject 5176 LVQCCDFIKIRATSNSQSLHDLPEWFSIVAALLLAFFASNSLTASLSMLEL*LAFSGTLDRKESSKNFPYGFARLNLAASTWGFENLRRFRTAMRKVMESFPLCLG*MLSNLSHALLSCSPAPPLCSSKNCCVTSWPQRTSRCSFKAILPTHLALVDSKLLKGMWVLNH 5682
Range 4: 4762 to 4995 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
159.1 bits(341) | 0.0 | 66/78(85%) | 0/78(0%) | Minus/Minus |
Query 8 ITFSPLFAVKK**SGFPAKCDRKLSTLKPVMFTRSRLWLKRDKAVNHRRSSV*KESCDIRIPPCLKFNPVDSPKVSVS 241 +TFSPL AVKK * G PAKC+RKLSTLKPVMFT+S+LWLKRDKAV+HRRSSV*KESCDIRIPPCLKF+PVDSP V VS Subject 4762 MTFSPLLAVKKW*RGLPAKCERKLSTLKPVMFTKSKLWLKRDKAVSHRRSSV*KESCDIRIPPCLKFSPVDSPNVRVS 4995
Range 5: 5056 to 5109 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
37.7 bits(76) | 0.0 | 14/18(78%) | 0/18(0%) | Minus/Minus |
Query 302 MTFSQGSPHSFSSLTPSF 355 +TFS GSPH+FSSL PSF Subject 5056 ITFSHGSPHNFSSLIPSF 5109
Range 6: 4763 to 5683 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
370.4 bits(802) | 0.0 | 169/307(55%) | 0/307(0%) | Minus/Minus |
Query 9 FGVVLRLHKN*GNIQQPIPTRSTGMIFYCRCTFACFLFLKFSHSFKHQVCIVACIQWNL*KESVK*KLPIWLCAPQFGSFDLRL*KF*TFPHGHEKGH*IIAFMSWVYAFKSFTCVAQLLASSTPVFIKELLGRFITTSHFTVFLQRHLSNPPGPG*FQVT*WDMGFKPFLI*AFRLKLLNFAILILAKEKHDL*PRITTQLLLSHPFIPPNANIETIKEVGLTGKQVPYHIFPAFCC*KVIERFPSKMRQKAFHPQTGDVH*IKIVAKTR*SCQPPAIICVKGIM*YKNPSMLEVQPSRFTESKRE 929 FG +L LHKN* NIQQPIP M+ Y CT FL + H V IV I WNL +E ++*+LPIW C PQFG F+L L*KF TF + HE+G+ II+FM WV AFKSFTC+AQLL S+T V IKELL + T+H + H ++PPG G* Q+ * D+GF+PF I*AF L NF ILIL +EKH+ P IT QLLLS+ I A+IETI+EV LT KQV Y I F C KV++ F SKM +K FHPQT +V+ I+I+A+ R*S +PP+I+ +KGIM*YK+ M EVQPS FT+ K E Subject 4763 FGAML*LHKN*SNIQQPIPA*PA*MVLYSCCTLTGFLCFELPHCLIKHVGIVTGI*WNLRQEGIQ*ELPIWFCPPQFGRFNLGL*KFETFSNSHEEGYGIISFMPWVNAFKSFTCIAQLLTSTTSVLIKELLRYLMATAHLPMLF*GHFAHPPGSG*LQIA*GDVGFEPFFI*AFHFHLFNFTILILTQEKHNFQPWITAQLLLSNSLIFTKADIETIEEVRLTWKQVSYDILSTFSCQKVVKGFASKM*EKTFHPQTCNVYQIQIMAEAR*SSKPPSIVSMKGIM*YKDSPMFEVQPS*FTKCKSE 5683
Range 7: 4764 to 5540 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
275.5 bits(595) | 0.0 | 146/259(56%) | 0/259(0%) | Plus/Plus |
Query 10 SRLLSVNLLG*TSSMEGFLYHMIPFTQMIAGG*QLYLVLATILI**TSPV*GWKAFCRILLGNRSITF*QQKAGKM**GTCFPVSPTSLMVSMLALGGMKG*ERRSCVVILG*RSCFSLAKMRIAKLRSLSLNAQMRNGLKPISH*VTWNQPGPGGLERWR*RNTVK*DVVMKRPNSSLMNTGVEEASN*ATHVKDLKAYTQDIKAMIQ*PFSWP*GNV*NFQSLKSKLPN*GAQSHMGSFYLTLSFQRFH*MQATMQT 786 S L VN LG*TS+M LYHMIPF I GG LYL A I I *T V*GWK F ILL N TF*Q K +M TCF VS TS MVSM AL M+ ERRSC VI G*+ CFS KMRI KL+ NAQM+NG KP S * W+QP PGG +W *++ + V M+ ++SLM+T V S+*A HVKDLKA+TQ IK MI *P SW NV NFQS + K PN*G Q+HMGS Y S RFH*M T+ T Subject 4764 SLLHLVNQLG*TSNMGESLYHMIPFILTIDGGLLLYLASAIIWIW*TLQV*GWKVFSHILLANPFTTF*QLKVERMSYETCFQVSLTSSMVSMSALVKMRELERRSCAVIHG*KLCFSWVKMRIVKLKRWKWNAQMKNGSKPTSP*AIWSQPEPGGWAKWP*KSIGRCAVAMR*RSNSLMSTEVVLVSS*AMHVKDLKAFTQGIKEMIP*PSSWLFENVSNFQSPRLKRPN*GGQNHMGSSYWIPSCLRFH*MPVTIPT 5540
Range 8: 5628 to 5684 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
36.3 bits(73) | 0.0 | 15/19(79%) | 0/19(0%) | Plus/Plus |
Query 874 GIGCWMLP*FL*SLNTTPN 930 GIGCWML *FL*S N PN Subject 5628 GIGCWMLL*FL*SHNIAPN 5684
Range 9: 4758 to 5534 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
268.7 bits(580) | 0.0 | 139/259(54%) | 0/259(0%) | Minus/Minus |
Query 4 HCGLHSVEPLKGKCQVETSHMALRASIWQLRLEALKILDVSSRP*ERSLNHCLYVLGICFQIFHMRCSIARFFHTCVHQRTVGSFHNHISLHGVPSTPSFQPTWPWLIPSYLMGYGF*TIPHLSIQTQAPQLRNPHLGQGKA*PLAKDHHTASPLSPLHSAQR*H*NH*RSWAHREASPLSHFPRFLLLKSDRAVSQQNATESFPPSNR*CSLDQDCG*NEIKLSTTGDHLCERNHVI*ESLHA*SSTQ*IHRK*A*AI 780 +C H VEP G+ V TSHM L ASIW L+ ALKI DV +P* R NH LY LG CFQIFHM CS A H C HQR H H + P PTW WL P+ L G GF*TI HLSI + QL NPHL GKA* A DH T SPL H Q *H*NH*RS AH EA + H F L KS + V QQN E+FPPSN *C + + G*+EIK T D ERNHVI* H *SS Q IH+ * *A+ Subject 4758 NCDWHLVEP*TGRNPVRTSHMVLPASIWPLQPGALKI*DVFEQP*GRLWNHFLYALGKCFQIFHMHCSAAHQHHLCAHQRIAALPHGHSAPPDALLRPFCPPTWLWLTPNCLRGCGF*TILHLSIPFPSLQLHNPHLDPGKA*LSAMDHRTTSPL*FPHFYQG*H*NH*RS*AHLEAGLV*HSLHF*LSKSGKGVCQQNVRENFPPSNL*CLPNPNYG*SEIKQ*ATVDRQYERNHVI*GFPHV*SSAQLIHQM*E*AV 5534
Range 10: 5628 to 5684 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
37.3 bits(75) | 0.0 | 13/19(68%) | 0/19(0%) | Minus/Minus |
Query 874 VWCGVETS*KLGQHPATNP 930 +WC V TS*KL QHP NP Subject 5628 IWCNVVTS*KLEQHPTANP 5684
Range 11: 5083 to 5682 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
193.1 bits(415) | 0.0 | 101/200(50%) | 0/200(0%) | Plus/Plus |
Query 329 VW*SLAKGHAFPWPR*GLRS*GA*V*MLK*GMV*NPYPIK*LGINQGQVGWKDGVEGTP*SEMWL*NDPTVL**TQVWKKRAIEQRM*KI*KHIPKT*RQ*FSDLSHGREETSKIFKASSRSCQIEARKAIWEVST*HFPFKGSTECKPQCKPDA*SCARI*GKESKQKCSDNRKSFR*IL*GLVAGCCPNFYEVSTPHQ 928 V *S+A+ +AFP R*GL S* MLK* MV NP+P+K G+NQ QVG ++G++ +W * + +L** Q W A EQ M*KI*KH+PK *R+*F +L HG +TS+IFKA S QIEA K IWEV T P GST+C+ Q + * + KES+ +CS+ R+ FR ++ GL GCC NFYEV+T HQ Subject 5083 VR*SMAESYAFPGSR*GL*S*RDGNGMLK*RMVQNPHPLKQFGVNQSQVGGQNGLKRASGGALWP*GNAAIL**AQRWCW*AAEQCM*KI*KHLPKA*RK*FHNLPHGCSKTSQIFKAPG*SGQIEAGKTIWEVLTGFLPV*GSTKCQSQFQHA**GSEGVRSKESQ*ECSNYREPFRQVMQGLAVGCCSNFYEVTTLHQ 5682
Range 12: 4900 to 5052 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
72.5 bits(152) | 0.0 | 30/51(59%) | 0/51(0%) | Plus/Plus |
Query 146 EHHRFEGGKLSVAFCWETALSLFNSKKRGKCDKGLASR*AQLL*WFQC*RW 298 +H+RFEGGK S+ FCW+T L LF+S K +C ASR*A LL WFQC W Subject 4900 KHYRFEGGKFSLTFCWQTPLPLFDS*KWRECHTRPASR*A*LLQWFQCQPW 5052
Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome
Sequence ID: JX559646.1 Length: 8726 Number of Matches: 13
Range 1: 5188 to 5694 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
379.5 bits(822) | 0.0 | 156/169(92%) | 0/169(0%) | Plus/Plus |
Query 423 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMLEAVREFEEKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHHTK 929 WFKTHIPLSNLESTRARWVGKMALKE+REVRCGYE TQQFFDEHR G EQLSNACERFESIYPRHKGNDS+TFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLD+FLSKVPLNA+HN+N+ EAVREFEEKKASKSAATIENHSGRSCRDWLLDVALIFMKSQH TK Subject 5188 WFKTHIPLSNLESTRARWVGKMALKEYREVRCGYEVTQQFFDEHRGGAGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKVPLNANHNSNMFNEAVREFEEKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTK 5694
Range 2: 4774 to 5136 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
293.9 bits(635) | 0.0 | 118/121(98%) | 0/121(0%) | Plus/Plus |
Query 9 LTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVSVGRNEGVREEKLCGDPWLKVMLFLGQ 371 LTLTFGESTGLNFK+GGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVS+G+NEGVREEKLCGDPWLKVMLFLGQ Subject 4774 LTLTFGESTGLNFKNGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVSIGKNEGVREEKLCGDPWLKVMLFLGQ 5136
Range 3: 5187 to 5693 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
287.9 bits(622) | 0.0 | 131/169(78%) | 0/169(0%) | Minus/Minus |
Query 422 LVWC*DFIKIRATSSNQSLQDLPE*FSIVAALLLAFFSSNSRTASSIRFALWLAFSGTFERKVSSRNFPYGFARLNLAAST*GFENFRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSKLLNGIWVLNH 928 LV C DF+K+RATS++QSL DLPE FSIVAALLLAFFSSNSRTAS L LAFSGT +RK SS+NFPYGFARL+LAAST GFENFRRF TAMR V ES PLCLG MLSNLSHALL+CS P LCSSKNC V S*P TSR SF AI PTHLALVDSKLL G+WVLNH Subject 5187 LVQCCDFMKMRATSNSQSLHDLPEWFSIVAALLLAFFSSNSRTASLNILEL*LAFSGTLDRKESSKNFPYGFARLSLAASTWGFENFRRFRTAMRNVMESFPLCLG*MLSNLSHALLSCSPAPPLCSSKNC*VTS*PQRTSRYSFKAILPTHLALVDSKLLKGMWVLNH 5693
Range 4: 4773 to 5006 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
155.0 bits(332) | 0.0 | 65/78(83%) | 0/78(0%) | Minus/Minus |
Query 8 ITFSPLFAVKK**SGFPAKCDRKLSTLKPVMFTRSRLWLKRDKAVNHRRSSV*KESCDIRIPPCLKFNPVDSPKVSVS 241 +TFSPL AVKK * G PAKC+RKLSTLKPVMFT+S+LWLKRDKAV+HRRSSV*KESCD+RIPP LKFNPVDSP V VS Subject 4773 MTFSPLLAVKKW*RGLPAKCERKLSTLKPVMFTKSKLWLKRDKAVSHRRSSV*KESCDMRIPPFLKFNPVDSPNVRVS 5006
Range 5: 5067 to 5120 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.5 bits(82) | 0.0 | 15/18(83%) | 0/18(0%) | Minus/Minus |
Query 302 MTFSQGSPHSFSSLTPSF 355 +TFS GSPH+FSSLTPSF Subject 5067 ITFSHGSPHNFSSLTPSF 5120
Range 6: 4774 to 5694 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
378.6 bits(820) | 0.0 | 165/307(54%) | 0/307(0%) | Minus/Minus |
Query 9 FGVVLRLHKN*GNIQQPIPTRSTGMIFYCRCTFACFLFLKFSHSFKHQVCIVACIQWNL*KESVK*KLPIWLCAPQFGSFDLRL*KF*TFPHGHEKGH*IIAFMSWVYAFKSFTCVAQLLASSTPVFIKELLGRFITTSHFTVFLQRHLSNPPGPG*FQVT*WDMGFKPFLI*AFRLKLLNFAILILAKEKHDL*PRITTQLLLSHPFIPPNANIETIKEVGLTGKQVPYHIFPAFCC*KVIERFPSKMRQKAFHPQTGDVH*IKIVAKTR*SCQPPAIICVKGIM*YKNPSMLEVQPSRFTESKRE 929 FG +LRLH+N NIQQPIPT M+ Y RCT F FL+ H + IV I WNL +E ++*+LPIW C PQFG F+L L*KF*T + HE+ + II+FM WV AFKSFTC+ QLL S+T V IKELL I T+H + HL++PPG G* + * ++GF+PF I*AF L NF +LIL +EKH+ P +TTQLLLS+ I PNA+IETI+EV LT KQV Y I P F C*K+++RF SKM +K FHPQT DV+ I+I+A+ R S +PP+++ +KG+M*Y+N + E+QPS T+ + E Subject 4774 FGTMLRLHENESNIQQPIPT*PA*MVLYSRCTLTGFFFLELPHCLIEHIGIVIGI*WNLRQERIQ*ELPIWFCPPQFGCFNLGL*KF*TLSNSHEECYGIISFMPWVNAFKSFTCITQLLTSTTSVLIKELLSYLIATAHLPILF*GHLTHPPGSG*L*IA*GNVGFEPFFI*AFLFHLFNFTVLILTQEKHNFQPWVTTQLLLSNSLIFPNADIETIEEVRLTWKQVSYDILPTFSC*KMVKRFTSKM*EKTFHPQTCDVYQIQIMAEARQSSKPPSVVSMKGVM*YENSPIFEIQPS*LTKCESE 5694
Range 7: 4772 to 5545 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
258.1 bits(557) | 0.0 | 133/258(52%) | 0/258(0%) | Minus/Minus |
Query 7 HCGLHSVEPLKGKCQVETSHMALRASIWQLRLEALKILDVSSRP*ERSLNHCLYVLGICFQIFHMRCSIARFFHTCVHQRTVGSFHNHISLHGVPSTPSFQPTWPWLIPSYLMGYGF*TIPHLSIQTQAPQLRNPHLGQGKA*PLAKDHHTASPLSPLHSAQR*H*NH*RSWAHREASPLSHFPRFLLLKSDRAVSQQNATESFPPSNR*CSLDQDCG*NEIKLSTTGDHLCERNHVI*ESLHA*SSTQ*IHRK*A*A 780 +C H VEP GK V TSHM L AS+W L+ ALKILD +P* NH LY LG CFQIFHM S+A H C HQR H+H + PS+ PTW WL + L GF*TI HLSI + QL +PHL GKA* A HHT SPL H +Q *H*NH*RS AH EA + H P F LLK+ + V QQN E+FPPSN *C + + G*+E K T ER+HVI*E H *+STQ H+ * *A Subject 4772 NCDWHLVEP*TGKNPVRTSHMVLPASVWLLQPGALKILDAFEQP*GMLWNHFLYALGKCFQIFHMHYSVAHQHHLCAHQRIAELPHSHSAPPDTLLRPSYPPTWLWLTLNCLRECGF*TILHLSIPLPSLQLHSPHLDPGKA*LSAMGHHTTSPL*LPHFSQC*H*NH*RS*AHLEAGLV*HSPHF*LLKNGKEVYQQNVRENFPPSNL*CLPNPNYG*SETKQ*ATVGRQYERSHVI*EFPHF*NSTQLTHQM*E*A 5545
Range 8: 5636 to 5695 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
30.4 bits(60) | 0.0 | 11/20(55%) | 0/20(0%) | Minus/Minus |
Query 871 VWCGVETS*KLGQHPATNPY 930 +W TS*K QHP NPY Subject 5636 IWYNAATS*K*EQHPTANPY 5695
Range 9: 4790 to 5569 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
255.4 bits(551) | 0.0 | 139/260(53%) | 0/260(0%) | Plus/Plus |
Query 25 VNLLG*TSSMEGFLYHMIPFTQMIAGG*QLYLVLATILI**TSPV*GWKAFCRILLGNRSITF*QQKAGKM**GTCFPVSPTSLMVSMLALGGMKG*ERRSCVVILG*RSCFSLAKMRIAKLRSLSLNAQMRNGLKPISH*VTWNQPGPGGLERWR*RNTVK*DVVMKRPNSSLMNTGVEEASN*ATHVKDLKAYTQDIKAMIQ*PFSWP*GNV*NFQSLKSKLPN*GAQSHMGSFYLTLSFQRFH*MQATMQT*CLKLC 804 V+ LG* S M F YHM PF GG L L A I I *TS V*GWK F ILL N F*Q K G+M TCF VS TS MVSM ALG M+ ERRSCVV G*+ CFS KMR KL+ NAQM+NG KP * +QP PGG RW *++ + V M+ ++SLM+T V SN* HVKDLKA+TQ IK MI * SW +V*NFQS + K PN*G Q+HMGS Y LS RFH*M T+ ++ C Subject 4790 VSQLG*ISKMGEFSYHMTPFILTTDGGLLLCLASAIIWIW*TSQV*GWKVFSHILLVNLFTIF*QLKVGRMSYETCFQVSLTSSMVSMSALGKMRELERRSCVVTHG*KLCFSWVKMRTVKLKRWKRNAQMKNGSKPTFP*AI*SQPEPGGWVRWP*KSIGRCAVAMR*LSNSLMSTEVVLVSN*VMHVKDLKAFTQGIKEMIP*HSSWLFESV*NFQSPRLKQPN*GGQNHMGSSYWILSCLRFH*MPITIPICSMRQC 5569
Range 10: 5636 to 5695 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
31.3 bits(62) | 0.0 | 13/20(65%) | 0/20(0%) | Plus/Plus |
Query 871 VGIGCWMLP*FL*SLNTTPN 930 VGIGCWML F *S + PN Subject 5636 VGIGCWMLLSFS*SRSIVPN 5695
Range 11: 5094 to 5693 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
187.6 bits(403) | 0.0 | 98/200(49%) | 0/200(0%) | Plus/Plus |
Query 329 VW*SLAKGHAFPWPR*GLRS*GA*V*MLK*GMV*NPYPIK*LGINQGQVGWKDGVEGTP*SEMWL*NDPTVL**TQVWKKRAIEQRM*KI*KHIPKT*RQ*FSDLSHGREETSKIFKASSRSCQIEARKAIWEVST*HFPFKGSTECKPQCKPDA*SCARI*GKESKQKCSDNRKSFR*IL*GLVAGCCPNFYEVSTPHQ 928 VW* +A+ +AFP R*GL S* MLK* MV NP+ +K +NQ QVG DG++ +WL* + +L** Q W A E M*KI*KH+PK *R+*F ++ HG + SKIFKA S Q EA K IWEV T FP GST+C+ Q + * A + GK+S+ +CSD R+ FR ++*GL GCC +F+EV+ +Q Subject 5094 VW*PMAESYAFPGSR*GL*S*RDGRGMLK*RMVQNPHSLKQFRVNQSQVGG*DGLKRVSGGALWL*GNSAIL**AQRWCW*ATE*CM*KI*KHLPKA*RK*FHNIPHGCSKASKIFKAPG*SSQTEAGKTIWEVLTGFFPV*GSTKCQSQFQYVQ*GSAGVRGKKSQ*ECSDYREPFRQVM*GLAVGCCSHFHEVAALYQ 5693
Range 12: 4911 to 5063 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.5 bits(165) | 0.0 | 32/51(63%) | 0/51(0%) | Plus/Plus |
Query 146 EHHRFEGGKLSVAFCWETALSLFNSKKRGKCDKGLASR*AQLL*WFQC*RW 298 +HHRFEGGK S+ FCW T+L FNS K G+C ASR*A LL WFQC W Subject 4911 KHHRFEGGKFSLTFCW*TSLPFFNS*KWGECHTRPASR*A*LLQWFQCQHW 5063
Grapevine rupestris stem pitting associated virus isolate Tannat Rspav1, complete genome
Sequence ID: KR528585.1 Length: 8595 Number of Matches: 13
Range 1: 5170 to 5676 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
379.5 bits(822) | 0.0 | 156/169(92%) | 0/169(0%) | Plus/Plus |
Query 423 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMLEAVREFEEKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHHTK 929 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYE TQQFFDEHR G EQLSNACERFESIYPRHKGNDS+TFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLD+FLSKVPLNASHN+N+ EAVREFE KKASKSAATIENH+GRSCRDWLLDVALIFMKSQH TK Subject 5170 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKVPLNASHNSNMFHEAVREFEAKKASKSAATIENHAGRSCRDWLLDVALIFMKSQHCTK 5676
Range 2: 4756 to 5118 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
292.0 bits(631) | 0.0 | 117/121(97%) | 0/121(0%) | Plus/Plus |
Query 9 LTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVSVGRNEGVREEKLCGDPWLKVMLFLGQ 371 LTLTFGESTGLNFK+GGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFF+GFNVS+G+NEGVREEKLCGDPWLKVMLFLGQ Subject 4756 LTLTFGESTGLNFKYGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFSGFNVSIGKNEGVREEKLCGDPWLKVMLFLGQ 5118
Range 3: 5169 to 5675 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
285.6 bits(617) | 0.0 | 129/169(76%) | 0/169(0%) | Minus/Minus |
Query 422 LVWC*DFIKIRATSSNQSLQDLPE*FSIVAALLLAFFSSNSRTASSIRFALWLAFSGTFERKVSSRNFPYGFARLNLAAST*GFENFRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSKLLNGIWVLNH 928 LV C DFIKIRATS++QSL DLP *FSIVAALLLAFF+SNSRTAS L LAFSGT +RK S+RNFPYG AR +LAAST GFEN RRF TA+RKV ES PLCLG MLSNLSHALL+CS +P LCSSKNC V S*P TSRCSF AI PTHLALVDS+LL G+WVLNH Subject 5169 LVQCCDFIKIRATSNSQSLHDLPA*FSIVAALLLAFFASNSRTAS*NMLEL*LAFSGTLDRKESNRNFPYGLARRSLAASTWGFENLRRFRTAIRKVIESFPLCLG*MLSNLSHALLSCSPVPPLCSSKNC*VTS*PQRTSRCSFKAILPTHLALVDSRLLRGMWVLNH 5675
Range 4: 4755 to 4988 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
145.9 bits(312) | 0.0 | 62/78(79%) | 0/78(0%) | Minus/Minus |
Query 8 ITFSPLFAVKK**SGFPAKCDRKLSTLKPVMFTRSRLWLKRDKAVNHRRSSV*KESCDIRIPPCLKFNPVDSPKVSVS 241 +TFSPL AVKK * G PAKC+RKLSTLKPV+FT+S+LWLKRD+AV+H RSSV*KES D+RIPP LKF+PVDSPKVSVS Subject 4755 MTFSPLLAVKKW*RGLPAKCERKLSTLKPVIFTKSKLWLKRDRAVSHLRSSV*KESWDMRIPPYLKFSPVDSPKVSVS 4988
Range 5: 5049 to 5102 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.9 bits(83) | 0.0 | 15/18(83%) | 0/18(0%) | Minus/Minus |
Query 302 MTFSQGSPHSFSSLTPSF 355 MTF+ GSPH+FSSLTPSF Subject 5049 MTFNHGSPHNFSSLTPSF 5102
Range 6: 4756 to 5676 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
393.8 bits(853) | 0.0 | 177/307(58%) | 0/307(0%) | Minus/Minus |
Query 9 FGVVLRLHKN*GNIQQPIPTRSTGMIFYCRCTFACFLFLKFSHSFKHQVCIVACIQWNL*KESVK*KLPIWLCAPQFGSFDLRL*KF*TFPHGHEKGH*IIAFMSWVYAFKSFTCVAQLLASSTPVFIKELLGRFITTSHFTVFLQRHLSNPPGPG*FQVT*WDMGFKPFLI*AFRLKLLNFAILILAKEKHDL*PRITTQLLLSHPFIPPNANIETIKEVGLTGKQVPYHIFPAFCC*KVIERFPSKMRQKAFHPQTGDVH*IKIVAKTR*SCQPPAIICVKGIM*YKNPSMLEVQPSRFTESKRE 929 F VLRLHKN NI QPIP T MI Y CT L LK H F V I+ I W+ ++ V *+LPIWL P FGSF+L L KF T H++G+*II+FM WV AFK TC+AQLL SST + IKELL FITT+H + Q H ++PPGPG* Q+T D+GFKPF I*AF L L NF ILIL +EKHD *P +TTQLLL + FI NAN++ +EV LT +QV Y I P F C +V++ F SK+ +K FHPQ D+H*I+IVAK R*S +PP IICVKGIM Y+NP +LE+QP RFTE KRE Subject 4756 FSAVLRLHKNQSNI*QPIPA*PTCMILYSCCTLTSLLRLKLPHCFMKHVGIMTSI*WDFRQKGV**ELPIWLGPP*FGSFNLGLRKFETLSDSHKEGY*IISFMPWVNAFKPLTCIAQLLTSSTSMLIKELLSHFITTTHLPMLFQGHFTHPPGPG*LQITQGDVGFKPFFI*AF*LHLFNFTILILTQEKHDF*PWVTTQLLLPNTFILSNANVKATEEVRLTWEQVSYDILPTFGCQEVVKGFASKV*EKTFHPQARDIH*IQIVAKAR*SSEPPPIICVKGIMGYENPPILEIQPCRFTEGKRE 5676
Range 7: 4757 to 5560 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
287.0 bits(620) | 0.0 | 153/268(57%) | 0/268(0%) | Plus/Plus |
Query 10 SRLLSVNLLG*TSSMEGFLYHMIPFTQMIAGG*QLYLVLATILI**TSPV*GWKAFCRILLGNRSITF*QQKAGKM**GTCFPVSPTSLMVSMLALGGMKG*ERRSCVVILG*RSCFSLAKMRIAKLRSLSLNAQMRNGLKPISH*VTWNQPGPGGLERWR*RNTVK*DVVMKRPNSSLMNTGVEEASN*ATHVKDLKAYTQDIKAMIQ*PFSWP*GNV*NFQSLKSKLPN*GAQSHMGSFYLTLSFQRFH*MQATMQT*CLKLCENL 813 SRL SVNL G* SSM GF Y MIPFTQMI GG LYL LATI I** S *GWK F LL N T *Q K G+M TC VS TS + LAL MK RRSCVV G*+SCFS KMRI KL+ S NAQM+NGLKP S *V W+QPGPGG +W *++ + VVMK N+SLM+ VE SN*A HV+ LKA+TQ IK MIQ*P W +V NF+S + KLPN G SHMGS Y T + H*M + T +K C +L Subject 4757 SRLPSVNLQG*ISSMGGFSYPMIPFTQMIGGGSLLYLALATIWI**ISRA*GWKVFSHTLLANPFTTS*QPKVGRMSYETCSQVSLTSSVALTLALERMKVLGRRSCVVTHG*KSCFSWVKMRIVKLKRWSQNAQMKNGLKPTSP*VIWSQPGPGGWVKWP*KSIGRCVVVMK*LNNSLMSIEVELVSN*AMHVRGLKAFTQGIKEMIQ*PSLWLSESVSNFRSPRLKLPNYGGPSHMGSSY*TPFCLKSH*MLVIIPTCFMKQCGSL 5560
Range 8: 5538 to 5672 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
49.6 bits(102) | 0.0 | 22/45(49%) | 0/45(0%) | Plus/Plus |
Query 791 A*SCARI*GKESKQKCSDNRKSFR*IL*GLVAGCCPNFYEVSTPH 925 +*S A +*G+E +CS+ R+S R*++ GL CC +FYEV+T H Subject 5538 S*SSAGV*GEEG**ECSNYRESCR*VMQGLAVRCCSDFYEVATLH 5672
Range 9: 4757 to 5482 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
281.9 bits(609) | 0.0 | 136/242(56%) | 0/242(0%) | Minus/Minus |
Query 10 VETSHMALRASIWQLRLEALKILDVSSRP*ERSLNHCLYVLGICFQIFHMRCSIARFFHTCVHQRTVGSFHNHISLHGVPSTPSFQPTWPWLIPSYLMGYGF*TIPHLSIQTQAPQLRNPHLGQGKA*PLAKDHHTASPLSPLHSAQR*H*NH*RSWAHREASPLSHFPRFLLLKSDRAVSQQNATESFPPSNR*CSLDQDCG*NEIKLSTTGDHLCERNHVI*ESLHA*SSTQ*IHRK*A* 735 + TSHMA A +WQL+ A KI D +P* R LNH LY LG CFQ HM CS+A FH HQR V S HNH + S P + PTWPWL P Y G GF*TI HLSI T + QL NPHL GKA* L HHT SP LHS Q * *+H*RS AH AS + H P F L +S + V QQ+ E+FPPS+ * SL+ +CG*+EI+ T DHLCERNH I*ES H *+S *IHR+*A* Subject 4757 IGTSHMAWPAVVWQLQPGASKI*DAFGQP*GRLLNHFLYALGKCFQTSHMHCSVAHQFHLYAHQRIVESLHNHNAPPDALSRPFYPPTWPWLTPDYSGGCGF*TILHLSILTPSLQLHNPHLDPGKA*LLTMGHHTTSPP*HLHSFQC*R*SH*RS*AHLGASLV*HSPHFWLSRSGKGVCQQSVRENFPPSSP*YSLNPNCG*SEIEQ*ATSDHLCERNHGI*ESPHT*NSAL*IHRR*A* 5482
Range 10: 5600 to 5671 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
27.6 bits(54) | 0.0 | 12/24(50%) | 0/24(0%) | Minus/Minus |
Query 853 CGVETS*KLGQHPATNPYKIYRND 924 C V TS*K QH NP Y +D Subject 5600 CSVATS*KSEQHLTANPCMTYLHD 5671
Range 11: 5076 to 5477 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
142.2 bits(304) | 0.0 | 73/134(54%) | 0/134(0%) | Plus/Plus |
Query 329 VW*SLAKGHAFPWPR*GLRS*GA*V*MLK*GMV*NPYPIK*LGINQGQVGWKDGVEGTP*SEMWL*NDPTVL**TQVWKKRAIEQRM*KI*KHIPKT*RQ*FSDLSHGREETSKIFKASSRSCQIEARKAIWEV 730 VW* + K HAFP R*GL S* V MLK* MV*NP+P +* G+NQGQVG +G+E +WL*+D T+L** W A EQ M*++*KH+PK *R+*F++L +G + S+IF+A SCQ A +AIWEV Subject 5076 VW*PMVKSHAFPGSR*GL*S*RDGVRMLK*RMV*NPHPPE*SGVNQGQVGG*NGLERASGGALWL*SDSTIL**A*RWNW*ATEQCM*EV*KHLPKA*RK*FNNLPYGCPKASQIFEAPG*SCQTTAGQAIWEV 5477
Range 12: 4893 to 5045 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
60.6 bits(126) | 0.0 | 26/51(51%) | 0/51(0%) | Plus/Plus |
Query 146 EHHRFEGGKLSVAFCWETALSLFNSKKRGKCDKGLASR*AQLL*WFQC*RW 298 E+H EGGK S+ CW+T L L +S+K G+C LA R*A LL W * W Subject 4893 EYHGLEGGKFSLTLCWQTPLPLLDSQKWGECHTRLAPR*A*LLQWL*R*HW 5045
Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome
Sequence ID: KX274275.1 Length: 8724 Number of Matches: 11
Range 1: 4774 to 5685 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
693.4 bits(1507) | 0.0 | 291/304(96%) | 0/304(0%) | Minus/Minus |
Query 9 VLRLHKN*GNIQQPIPTRSTGMIFYCRCTFACFLFLKFSHSFKHQVCIVACIQWNL*KESVK*KLPIWLCAPQFGSFDLRL*KF*TFPHGHEKGH*IIAFMSWVYAFKSFTCVAQLLASSTPVFIKELLGRFITTSHFTVFLQRHLSNPPGPG*FQVT*WDMGFKPFLI*AFRLKLLNFAILILAKEKHDL*PRITTQLLLSHPFIPPNANIETIKEVGLTGKQVPYHIFPAFCC*KVIERFPSKMRQKAFHPQTGDVH*IKIVAKTR*SCQPPAIICVKGIM*YKNPSMLEVQPSRFTESKRE 920 VLRLHKN*GNIQQPIPTRST MIFYCRCTFACFLFLKFSHSFKHQVCIVACIQWNL*KESVK*KLPIWLCAP F SFDLRL*KF TFP+ HEKGH*II FMSW+YAFKSFTC+AQLLASSTPVFIKELLGRFITTSHFTVFLQRHLSNPPGPG FQVT*WDMGFKPFLI* FRLKLLNFAILILAKEKHDL*PRITTQLLLSHPFIPPNANIETIKEVGLTGKQVPYHI PAFCC*KVIERFPSKMRQKAFHPQTG+VH*IKIVAKTR*SCQPPAIICVKGIM*YKNPSMLEVQPSRFTESKRE Subject 4774 VLRLHKN*GNIQQPIPTRSTRMIFYCRCTFACFLFLKFSHSFKHQVCIVACIQWNL*KESVK*KLPIWLCAP*FCSFDLRL*KFKTFPNSHEKGH*IITFMSWIYAFKSFTCIAQLLASSTPVFIKELLGRFITTSHFTVFLQRHLSNPPGPGRFQVT*WDMGFKPFLI*TFRLKLLNFAILILAKEKHDL*PRITTQLLLSHPFIPPNANIETIKEVGLTGKQVPYHILPAFCC*KVIERFPSKMRQKAFHPQTGNVH*IKIVAKTR*SCQPPAIICVKGIM*YKNPSMLEVQPSRFTESKRE 5685
Range 2: 5188 to 5694 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
406.1 bits(880) | 0.0 | 168/169(99%) | 0/169(0%) | Plus/Plus |
Query 423 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMLEAVREFEEKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHHTK 929 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMLEAVREFEEKKASKSAATIENHSGRSCRDWLLDVALIFMKSQH TK Subject 5188 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMLEAVREFEEKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTK 5694
Range 3: 4774 to 5136 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
298.4 bits(645) | 0.0 | 120/121(99%) | 0/121(0%) | Plus/Plus |
Query 9 LTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVSVGRNEGVREEKLCGDPWLKVMLFLGQ 371 LTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVS+GRNEGVREEKLCGDPWLKVMLFLGQ Subject 4774 LTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQ 5136
Range 4: 4775 to 5689 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
653.6 bits(1420) | 0.0 | 290/305(95%) | 0/305(0%) | Minus/Minus |
Query 10 CGVETS*KLGQHPATNPYKIYRNDXXXXXXXXXXXFPQILAQLQASGLHCGLHSVEPLKGKCQVETSHMALRASIWQLRLEALKILDVSSRP*ERSLNHCLYVLGICFQIFHMRCSIARFFHTCVHQRTVGSFHNHISLHGVPSTPSFQPTWPWLIPSYLMGYGF*TIPHLSIQTQAPQLRNPHLGQGKA*PLAKDHHTASPLSPLHSAQR*H*NH*RSWAHREASPLSHFPRFLLLKSDRAVSQQNATESFPPSNR*CSLDQDCG*NEIKLSTTGDHLCERNHVI*ESLHA*SSTQ*IHRK*A* 924 C VETS*KLGQHPATNPYKIY+NDFLLSLHFCLLSFPQILAQLQASGLHCGLHSVEPLKGKCQV+TSHMALRA I QLRLEALKI DVS +P*ERSLNH LYVL ICFQIFHM CSIARFFHTCVHQRTVGSFHNHISLHGVPSTPSFQPTWPW IPSYLMGYGF*TIPHL+IQTQAPQLRNPHLGQGKA*PLAKDHHTASPLSPLHSAQ *H*NH*RSWAHREASPLSH PRFLLLKSDRAVSQQNATESFPPSNR*CSLDQDCG*NEIKLSTTGDHLCERNHVI*ESLHA*SSTQ*IHRK*A* Subject 4775 CSVETS*KLGQHPATNPYKIYQNDFLLSLHFCLLSFPQILAQLQASGLHCGLHSVEPLKGKCQVKTSHMALRALILQLRLEALKI*DVS*QP*ERSLNHYLYVLDICFQIFHMHCSIARFFHTCVHQRTVGSFHNHISLHGVPSTPSFQPTWPWSIPSYLMGYGF*TIPHLNIQTQAPQLRNPHLGQGKA*PLAKDHHTASPLSPLHSAQC*H*NH*RSWAHREASPLSHSPRFLLLKSDRAVSQQNATESFPPSNR*CSLDQDCG*NEIKLSTTGDHLCERNHVI*ESLHA*SSTQ*IHRK*A* 5689
Range 5: 4775 to 5578 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
573.8 bits(1246) | 0.0 | 257/268(96%) | 0/268(0%) | Plus/Plus |
Query 10 SRLLSVNLLG*TSSMEGFLYHMIPFTQMIAGG*QLYLVLATILI**TSPV*GWKAFCRILLGNRSITF*QQKAGKM**GTCFPVSPTSLMVSMLALGGMKG*ERRSCVVILG*RSCFSLAKMRIAKLRSLSLNAQMRNGLKPISH*VTWNQPGPGGLERWR*RNTVK*DVVMKRPNSSLMNTGVEEASN*ATHVKDLKAYTQDIKAMIQ*PFSWP*GNV*NFQSLKSKLPN*GAQSHMGSFYLTLSFQRFH*MQATMQT*CLKLCENL 813 SRLLSVNLLG*TSSMEGFLYHMIPFTQMIAGG*QLYLVLATILI**T PV*GWKAFCRILLGNRSITF*QQKAG+M**GTCFPVSPTSLMVSMLALGGMKG*ERRSCVVILG*RSCFSLAKMRIAKLRSLSLN QMRNGLKPISH*VTWN+PGPGGLERWR*RNTVK*DVVMKRPNSSLMNTGVEEASN*A HVKDLKAY QDIK MIQ*PFSW GNV NFQSLKSKL N*GAQSHMGSFYLTLSFQRFH*MQATMQT*CLKLCENL Subject 4775 SRLLSVNLLG*TSSMEGFLYHMIPFTQMIAGG*QLYLVLATILI**TLPV*GWKAFCRILLGNRSITF*QQKAGRM**GTCFPVSPTSLMVSMLALGGMKG*ERRSCVVILG*RSCFSLAKMRIAKLRSLSLNVQMRNGLKPISH*VTWNRPGPGGLERWR*RNTVK*DVVMKRPNSSLMNTGVEEASN*AMHVKDLKAYIQDIKVMIQ*PFSWLLGNVLNFQSLKSKLQN*GAQSHMGSFYLTLSFQRFH*MQATMQT*CLKLCENL 5578
Range 6: 5618 to 5686 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.5 bits(106) | 0.0 | 22/23(96%) | 0/23(0%) | Plus/Plus |
Query 853 IIPVDLVGIGCWMLP*FL*SLNT 921 II VDLVGIGCWMLP*FL*SLNT Subject 5618 IILVDLVGIGCWMLP*FL*SLNT 5686
Range 7: 4911 to 5693 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
529.4 bits(1149) | 0.0 | 244/261(93%) | 0/261(0%) | Plus/Plus |
Query 146 EHHRFEGGKLSVAFCWETALSLFNSKKRGKCDKGLASR*AQLL*WFQC*RWXXXXXXXXXXVW*SLAKGHAFPWPR*GLRS*GA*V*MLK*GMV*NPYPIK*LGINQGQVGWKDGVEGTP*SEMWL*NDPTVL**TQVWKKRAIEQRM*KI*KHIPKT*RQ*FSDLSHGREETSKIFKASSRSCQIEARKAIWEVST*HFPFKGSTECKPQCKPDA*SCARI*GKESKQKCSDNRKSFR*IL*GLVAGCCPNFYEVSTPHQ 928 EH+RFEGGKLSVAFCWETALSLFNSKKRG+CDKGLASR*AQLL*WFQC* WAE*RGERGEAVW*SLAKGHAFPWPR*GLRS*GA*V*M K*GMV*NPYPIK*LGI+QGQVGWKDGVEGTP*SEMWL*NDPTVL**TQVWKKRAIEQ M*KI*KHI KT*R *FSDLSHG ETS IFKASSRSC+I+ARKAIWEV T*HFPFKGSTECKPQCKPDA*SCARI*GKESKQKCSDNRKSF *IL*GLVAGCCPNFYEVST H+ Subject 4911 EHYRFEGGKLSVAFCWETALSLFNSKKRGECDKGLASR*AQLL*WFQC*HWAE*RGERGEAVW*SLAKGHAFPWPR*GLRS*GA*V*MFK*GMV*NPYPIK*LGIDQGQVGWKDGVEGTP*SEMWL*NDPTVL**TQVWKKRAIEQCM*KI*KHISKT*R**FSDLSHGC*ETS*IFKASSRSCKIKARKAIWEVFT*HFPFKGSTECKPQCKPDA*SCARI*GKESKQKCSDNRKSFW*IL*GLVAGCCPNFYEVSTLHK 5693
Range 8: 4776 to 4874 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
81.3 bits(171) | 0.0 | 33/33(100%) | 0/33(0%) | Plus/Plus |
Query 11 HAYFR*IYWVELQAWRDSYIT*FLSHR*SPVVD 109 HAYFR*IYWVELQAWRDSYIT*FLSHR*SPVVD Subject 4776 HAYFR*IYWVELQAWRDSYIT*FLSHR*SPVVD 4874
Range 9: 5187 to 5690 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
384.6 bits(833) | 0.0 | 164/168(98%) | 0/168(0%) | Minus/Minus |
Query 422 VWC*DFIKIRATSSNQSLQDLPE*FSIVAALLLAFFSSNSRTASSIRFALWLAFSGTFERKVSSRNFPYGFARLNLAAST*GFENFRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSKLLNGIWVLNH 925 V C*DFIKIRATSSNQSLQDLPE*FSIVAALLLAFFSSNSRTASSIRFALWLAFSGTFERKVSS+NFPYGFARLN AAST*GFEN RRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSKLLNGIWVLNH Subject 5187 VQC*DFIKIRATSSNQSLQDLPE*FSIVAALLLAFFSSNSRTASSIRFALWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFENLRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSKLLNGIWVLNH 5690
Range 10: 4773 to 5006 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
184.4 bits(396) | 0.0 | 78/78(100%) | 0/78(0%) | Minus/Minus |
Query 8 ITFSPLFAVKK**SGFPAKCDRKLSTLKPVMFTRSRLWLKRDKAVNHRRSSV*KESCDIRIPPCLKFNPVDSPKVSVS 241 ITFSPLFAVKK**SGFPAKCDRKLSTLKPVMFTRSRLWLKRDKAVNHRRSSV*KESCDIRIPPCLKFNPVDSPKVSVS Subject 4773 ITFSPLFAVKK**SGFPAKCDRKLSTLKPVMFTRSRLWLKRDKAVNHRRSSV*KESCDIRIPPCLKFNPVDSPKVSVS 5006
Rupestris stem pitting associated virus strain Syrah, complete genome
Sequence ID: AY368590.1 Length: 8742 Number of Matches: 11
Range 1: 5188 to 5694 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
398.3 bits(863) | 0.0 | 165/169(98%) | 0/169(0%) | Plus/Plus |
Query 423 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMLEAVREFEEKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHHTK 929 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSE+LSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLM EAVREFE KKASKSAATIENHSGRSCRDWLLDVALIFMKSQH TK Subject 5188 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEKLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMHEAVREFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTK 5694
Range 2: 4774 to 5136 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
295.7 bits(639) | 0.0 | 119/121(98%) | 0/121(0%) | Plus/Plus |
Query 9 LTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVSVGRNEGVREEKLCGDPWLKVMLFLGQ 371 LTLTFGESTGLNFK+GGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVS+GRNEGVREEKLCGDPWLKVMLFLGQ Subject 4774 LTLTFGESTGLNFKYGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQ 5136
Range 3: 4774 to 5685 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
606.4 bits(1317) | 0.0 | 250/304(82%) | 0/304(0%) | Minus/Minus |
Query 9 VLRLHKN*GNIQQPIPTRSTGMIFYCRCTFACFLFLKFSHSFKHQVCIVACIQWNL*KESVK*KLPIWLCAPQFGSFDLRL*KF*TFPHGHEKGH*IIAFMSWVYAFKSFTCVAQLLASSTPVFIKELLGRFITTSHFTVFLQRHLSNPPGPG*FQVT*WDMGFKPFLI*AFRLKLLNFAILILAKEKHDL*PRITTQLLLSHPFIPPNANIETIKEVGLTGKQVPYHIFPAFCC*KVIERFPSKMRQKAFHPQTGDVH*IKIVAKTR*SCQPPAIICVKGIM*YKNPSMLEVQPSRFTESKRE 920 +LRLH+N +IQQPIP RST MIFYCRCTFACFL LKFSHSF HQVCIVACIQW+L KESVK*K PIWLCAPQF SF+LRL +F TFP HE+GH*II FMSW+YAFKSFTC+AQ LASSTP+FIKELLGRFITTSHFTVFLQ HLSNPPGP *FQ+T*WDMGFKPFLI AFRLK LN AILILA EKHDL*PRITT+L LSH FIPPNAN+E IKEVGLTGKQ+PYHI P F C*KVI+RFPSKMRQKAFHPQT +++*IKIVAKTR* CQPP IICVKG+M Y+NPS+LE+QPSRFTE KRE Subject 4774 MLRLHENESDIQQPIPARSTRMIFYCRCTFACFLCLKFSHSFMHQVCIVACIQWDLRKESVK*KFPIWLCAPQFCSFNLRLREFKTFPDSHEEGH*IITFMSWIYAFKSFTCIAQFLASSTPMFIKELLGRFITTSHFTVFLQCHLSNPPGPC*FQIT*WDMGFKPFLIRAFRLKFLNLAILILA*EKHDL*PRITTKLFLSHSFIPPNANVEAIKEVGLTGKQIPYHILPTFRC*KVIKRFPSKMRQKAFHPQTSNIY*IKIVAKTR*GCQPPTIICVKGVMGYENPSILEIQPSRFTEGKRE 5685
Range 4: 4775 to 5689 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
539.5 bits(1171) | 0.0 | 247/305(81%) | 0/305(0%) | Minus/Minus |
Query 10 CGVETS*KLGQHPATNPYKIYRNDXXXXXXXXXXXFPQILAQLQASGLHCGLHSVEPLKGKCQVETSHMALRASIWQLRLEALKILDVSSRP*ERSLNHCLYVLGICFQIFHMRCSIARFFHTCVHQRTVGSFHNHISLHGVPSTPSFQPTWPWLIPSYLMGYGF*TIPHLSIQTQAPQLRNPHLGQGKA*PLAKDHHTASPLSPLHSAQR*H*NH*RSWAHREASPLSHFPRFLLLKSDRAVSQQNATESFPPSNR*CSLDQDCG*NEIKLSTTGDHLCERNHVI*ESLHA*SSTQ*IHRK*A* 924 C VETS*K +HPA NP KIY+NDFLLSLHFCLLS PQILAQL ASGLHCGLHSV P KGKCQV+ SHMALRASI QL+LEA +I DVS +P* RSLNH LYVL ICFQIFHM CSI+RFFHT VHQRTVGSFHNHISLHGVPS PSFQPTWP LIP YLMGYGF*TIPH SIQTQ PQ RNPHLG KA*PLAKDHH A PL+ LHSAQ * *+H*RSWAHREA+PLSH P F LL+SD+AVSQQNATESFPPSN+* LDQDCG*NEI+LSTT DHLCER+H I*ESLH *+S Q*IHR+*A* Subject 4775 CNVETS*K*ERHPAANPCKIYQNDFLLSLHFCLLSLPQILAQLHASGLHCGLHSVGPSKGKCQVKISHMALRASILQLQLEASRI*DVS*QP*GRSLNHYLYVLDICFQIFHMHCSISRFFHTYVHQRTVGSFHNHISLHGVPSMPSFQPTWPLLIPDYLMGYGF*TIPHSSIQTQVPQPRNPHLGLRKA*PLAKDHHKAFPLALLHSAQC*R*SH*RSWAHREANPLSHSPHFSLLESDKAVSQQNATESFPPSNQ*YLLDQDCG*NEIRLSTTDDHLCERSHGI*ESLHT*NSAQ*IHRR*A* 5689
Range 5: 5187 to 5690 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
369.5 bits(800) | 0.0 | 157/168(93%) | 0/168(0%) | Minus/Minus |
Query 422 VWC*DFIKIRATSSNQSLQDLPE*FSIVAALLLAFFSSNSRTASSIRFALWLAFSGTFERKVSSRNFPYGFARLNLAAST*GFENFRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSKLLNGIWVLNH 925 V C*DF+K+RATSS+QSLQDLPE*FSIVAALLLAFF+SNSRTAS IRFALWLAFSGTFERKVSS+NFPYGFARLN AAST*GFEN RRFLTAMRKVTESLPLCLGYMLSNLSHALLN SLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDS+LLNGIWVLNH Subject 5187 VQC*DFMKMRATSSSQSLQDLPE*FSIVAALLLAFFASNSRTASCIRFALWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFENLRRFLTAMRKVTESLPLCLGYMLSNLSHALLNFSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSRLLNGIWVLNH 5690
Range 6: 4773 to 5006 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
167.4 bits(359) | 0.0 | 72/78(92%) | 0/78(0%) | Minus/Minus |
Query 8 ITFSPLFAVKK**SGFPAKCDRKLSTLKPVMFTRSRLWLKRDKAVNHRRSSV*KESCDIRIPPCLKFNPVDSPKVSVS 241 ITFSPLFAV+K**SGFPAKCDRKLSTLKPV+FTRSRLWLKRDKAVNHRRSSV*KES D+RIPP LKF+PVDSPKVSVS Subject 4773 ITFSPLFAVRK**SGFPAKCDRKLSTLKPVIFTRSRLWLKRDKAVNHRRSSV*KESWDMRIPPYLKFSPVDSPKVSVS 5006
Range 7: 5064 to 5120 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
41.8 bits(85) | 0.0 | 17/19(89%) | 0/19(0%) | Minus/Minus |
Query 299 MTFSQGSPHSFSSLTPSFR 355 MTFSQGSP SFSS TPSFR Subject 5064 MTFSQGSPQSFSSRTPSFR 5120
Range 8: 4775 to 5578 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
481.7 bits(1045) | 0.0 | 223/268(83%) | 0/268(0%) | Plus/Plus |
Query 10 SRLLSVNLLG*TSSMEGFLYHMIPFTQMIAGG*QLYLVLATILI**TSPV*GWKAFCRILLGNRSITF*QQKAGKM**GTCFPVSPTSLMVSMLALGGMKG*ERRSCVVILG*RSCFSLAKMRIAKLRSLSLNAQMRNGLKPISH*VTWNQPGPGGLERWR*RNTVK*DVVMKRPNSSLMNTGVEEASN*ATHVKDLKAYTQDIKAMIQ*PFSWP*GNV*NFQSLKSKLPN*GAQSHMGSFYLTLSFQRFH*MQATMQT*CLKLCENL 813 SRL SVNLLG* SSMEGF Y M PFTQMI GG*Q YLVLATILI** V*GWKAFCRILLGNR ITF*Q+K G+M**G CFPVSPTSLM S LALGGMK ER+S VVILG*RSCFS AKMRIA+LR+LSLNA+MRNGLKPISH*V WNQ GPGGLERW *RNTVK*DVVMKRPNSSLMN GVEEA N*A HVKDLKAY QDIK MIQ*P SW GNV N +SLK KL N*GAQSHMG+FYLTLSF+R H*MQATMQT*C+KLCENL Subject 4775 SRLPSVNLLG*ISSMEGFSYPMTPFTQMIVGG*QPYLVLATILI**ILLV*GWKAFCRILLGNRFITF*QRKVGRM**GICFPVSPTSLMASTLALGGMKECERKSFVVILG*RSCFS*AKMRIARLRNLSLNARMRNGLKPISH*VIWNQQGPGGLERWH*RNTVK*DVVMKRPNSSLMNIGVEEARN*AMHVKDLKAYIQDIKVMIQ*PSSWLSGNVLNSRSLKLKLQN*GAQSHMGNFYLTLSFRRSH*MQATMQT*CMKLCENL 5578
Range 9: 5618 to 5683 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
35.0 bits(70) | 0.0 | 16/22(73%) | 0/22(0%) | Plus/Plus |
Query 853 IIPVDLVGIGCWMLP*FL*SLN 918 II VDL GIGCWM F *SLN Subject 5618 IILVDLAGIGCWMSLSFS*SLN 5683
Range 10: 4911 to 5693 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
447.8 bits(971) | 0.0 | 211/261(81%) | 0/261(0%) | Plus/Plus |
Query 146 EHHRFEGGKLSVAFCWETALSLFNSKKRGKCDKGLASR*AQLL*WFQC*RWXXXXXXXXXXVW*SLAKGHAFPWPR*GLRS*GA*V*MLK*GMV*NPYPIK*LGINQGQVGWKDGVEGTP*SEMWL*NDPTVL**TQVWKKRAIEQRM*KI*KHIPKT*RQ*FSDLSHGREETSKIFKASSRSCQIEARKAIWEVST*HFPFKGSTECKPQCKPDA*SCARI*GKESKQKCSDNRKSFR*IL*GLVAGCCPNFYEVSTPHQ 928 +++ FEGGKLSVAFCWETALSL NS+K G+CDKG ASR*AQLL*W Q * WAE*R RG+A+W*SLAKGHAF PR*GLR *G *V*ML+*GMV*NPYPIK* GIN+GQVGWKDG+EGTP*SEMWL*NDPTVL**T VWKKR IEQ M*KI*KHI KT*R *FSDL HG +ETS I +ASS SC+IEARKAIWE+ T*HFPF+G TECKPQCKPDA*SCARI*GKESKQKCSDNRKSF *IL GL AGC +F+EVST H+ Subject 4911 KYYWFEGGKLSVAFCWETALSLSNSEKWGECDKGFASR*AQLL*WLQR*HWAE*RSARGKALW*SLAKGHAFLRPR*GLRG*GT*V*MLE*GMV*NPYPIK*SGINKGQVGWKDGIEGTP*SEMWL*NDPTVL**T*VWKKREIEQCM*KI*KHISKT*R**FSDLPHGCQETS*ILEASS*SCKIEARKAIWEIFT*HFPFEGPTECKPQCKPDA*SCARI*GKESKQKCSDNRKSFW*ILQGLAAGCRSHFHEVSTLHK 5693
Nucleotide Sequence (413 letters)
Query ID: | ds2016-132_4 |
Query definition: | No definition line |
Query length: | 951 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
268.7 | 1475.3 | 25% | 2.82e-70 | 87% | FR691076.1 | |
260.5 | 1232.9 | 25% | 8.229e-68 | 51% | AY881626.1 | |
258.6 | 1214.1 | 25% | 2.905e-67 | 51% | JX559646.1 | |
254.1 | 1196.3 | 25% | 6.803e-66 | 46% | KC427107.1 | |
265.5 | 1281.9 | 30% | 2.564e-69 | 67% | KX925556.1 |
Alignments
Grapevine rupestris stem pitting associated virus complete genome, genomic RNA, isolate GRSPaV MG
Sequence ID: FR691076.1 Length: 8749 Number of Matches: 8
Range 1: 1744 to 2124 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
268.7 bits(584) | 0.0 | 119/127(94%) | 0/127(0%) | Plus/Plus |
Query 18 YKVGLFKHIKALTYCFNSCGLQWFLLRRRSNLKFLKDGASSFANLSCEVIKAYKSVVLQATLPEALLSLTKVFIRDSDLNDVFTSELISNDESVGLVCSAGSTSEKSQSVNCEASRVPVSSSSTQLP 398 YKVGLFKHIK LTY FNSCGLQ FLL+R SNLKFLKDGASSFANLSCEVIKAYKSVV QATLPEALLSLTKVFIRDSDLND FTSELISNDESVGLVCSAGSTSEKSQ VNCEASRVPVSSSSTQLP Subject 1744 YKVGLFKHIKPLTYWFNSCGLQCFLLKRGSNLKFLKDGASSFANLSCEVIKAYKSVVSQATLPEALLSLTKVFIRDSDLNDAFTSELISNDESVGLVCSAGSTSEKSQPVNCEASRVPVSSSSTQLP 2124
Range 2: 1728 to 2123 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
251.7 bits(543) | 0.0 | 121/132(92%) | 0/132(0%) | Minus/Minus |
Query 2 GSWVLEELTGTLLASQLTDCDFSEVEPAEQTSPTDSSFEINSEVKTSFRSESLMKTLVRLSRASGRVACNTTDL*ALITSQLRLAKDDAPSFXXXXXXXXXXXNHWRPQELKQ*VRAFMCLKRPTL*EFWTS 397 GSWVLEELTGTLLASQLT CDFSEVEPAEQTSPTDSSFEINSEVK SFRSESLMKTLVRLSRASG VAC+TTDL*ALITSQLRLAKDDAPSFRNLRLD RLRR HWRPQEL Q*VR FMCLKRPTL*+ W S Subject 1728 GSWVLEELTGTLLASQLTGCDFSEVEPAEQTSPTDSSFEINSEVKASFRSESLMKTLVRLSRASGSVACDTTDL*ALITSQLRLAKDDAPSFRNLRLDPRLRRKHWRPQELNQ*VRGFMCLKRPTL*KIWAS 2123
Range 3: 1729 to 2127 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
250.3 bits(540) | 0.0 | 116/133(87%) | 0/133(0%) | Minus/Minus |
Query 3 TRQLGA*RAHWNSASLTID*L*FLRG*TC*TNQSD*LII*D*FRGENII*IRISYENFS*A*QSFREGCL*HNRLVGLDNLTTKISKGRCSIFQKLEVGPSPKKEPLETTRIETISEGFYVLKKTHFVRILDL 401 +R LGA*RAHWN ASLTID L*FLRG*TC*TNQSD*LII*+*FRGE+II*IR+SYENFS*A*QSFRE CL*+NRLVGLDNLTTKISKGRCSIFQKLEVGPS K+E LETTRIE ISEGFYVLKKTHFV+ + L Subject 1729 SR*LGA*RAHWNPASLTIDWL*FLRG*TC*TNQSD*LII*N*FRGESII*IRVSYENFS*A*QSFRECCL*YNRLVGLDNLTTKISKGRCSIFQKLEVGPSLKEEALETTRIEPISEGFYVLKKTHFVKNMGL 2127
Range 4: 1727 to 2128 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
242.5 bits(523) | 0.0 | 116/134(87%) | 0/134(0%) | Plus/Plus |
Query 1 VRSKILTKWVFLST*KPSLIVSILVVSNGSFLGEGPTSSF*KMEHRPLLILVVRLSRPTSLLCYRQPSLKLC*A*LKFS*EILI*MMFSPLN*SQMMSQSDWFVQQVQPLRNHSQSIVRLAEFQ*ALQAPSCLV 402 VR TKWVFLST* PSLI SILVVSN S L EGPTSSF*KMEHRPLLILVVRLSRPTSLL +RQ SLKLC*A*LKFS*E LI*MM SPLN* QMMSQSDWFVQQVQPLRNHSQSIVRLA FQ*ALQAPS L+ Subject 1727 VRPIFFTKWVFLST*NPSLIGSILVVSNASSLSEGPTSSF*KMEHRPLLILVVRLSRPTSLLYHRQHSLKLC*A*LKFS*ETLI*MMLSPLN*FQMMSQSDWFVQQVQPLRNHSQSIVRLAGFQ*ALQAPSYLL 2128
Range 5: 1727 to 1921 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
137.2 bits(293) | 0.0 | 57/65(88%) | 0/65(0%) | Minus/Minus |
Query 1 PVTQQTCRP**PHN*D*QRTMLHLSET*GWTFA*EGTIGDHKN*NNK*GLLCA*KDPLCKNFGPH 195 PV QQTCRP**PHN*D*QRTMLHLSET*GWT A* G+IGDHKN* NK*G+LCA*KDPLCK +GPH Subject 1727 PVIQQTCRP**PHN*D*QRTMLHLSET*GWTLA*GGSIGDHKN*TNK*GVLCA*KDPLCKKYGPH 1921
Range 6: 1970 to 2125 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
111.5 bits(237) | 0.0 | 47/52(90%) | 0/52(0%) | Minus/Minus |
Query 244 QAAGCLKSSLELC*PHN*LTVISQRLNLLNKPVRLTHHLRLIQR*KHHLDQN 399 Q AGCLKSSLE C*PHN*L VISQRLNLLNKPVRLTHHL+LIQR*KHHLDQ+ Subject 1970 QVAGCLKSSLEPC*PHN*LAVISQRLNLLNKPVRLTHHLKLIQR*KHHLDQS 2125
Range 7: 1728 to 1922 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
139.9 bits(299) | 0.0 | 58/65(89%) | 0/65(0%) | Plus/Plus |
Query 2 *GPKFLQSGSF*AHKSPHLLFQFLWSPMVPS*AKVQPQVSERWSIVLC*S*L*GYQGLQVCCVTG 196 *GP FLQSGSF*AHK+PHLL QFLWSPM+P *A+VQPQVSERWSIVLC*S*L*GYQGLQVCC+TG Subject 1728 *GPYFLQSGSF*AHKTPHLLVQFLWSPMLPP*ARVQPQVSERWSIVLC*S*L*GYQGLQVCCITG 1922
Rupestris stem pitting associated virus strain SG1, complete genome
Sequence ID: AY881626.1 Length: 8742 Number of Matches: 8
Range 1: 1729 to 2124 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
260.5 bits(566) | 0.0 | 115/132(87%) | 0/132(0%) | Plus/Plus |
Query 3 EVQNSYKVGLFKHIKALTYCFNSCGLQWFLLRRRSNLKFLKDGASSFANLSCEVIKAYKSVVLQATLPEALLSLTKVFIRDSDLNDVFTSELISNDESVGLVCSAGSTSEKSQSVNCEASRVPVSSSSTQLP 398 EVQ SYKVGLFKHIK+LTYCFNSCGLQWFLL+RRSNLKFLKD SSFANLSCEVIKAYKSVVLQATLPEALLSLTKVFIRDSDLN F SEL S+DES+ LV SAGSTSEKSQSV+CEASRV V+SSSTQ P Subject 1729 EVQKSYKVGLFKHIKSLTYCFNSCGLQWFLLKRRSNLKFLKDRVSSFANLSCEVIKAYKSVVLQATLPEALLSLTKVFIRDSDLNGAFNSELASHDESIRLVGSAGSTSEKSQSVSCEASRVLVNSSSTQPP 2124
Range 2: 1728 to 2123 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.9 bits(491) | 0.0 | 115/132(87%) | 0/132(0%) | Minus/Minus |
Query 2 GSWVLEELTGTLLASQLTDCDFSEVEPAEQTSPTDSSFEINSEVKTSFRSESLMKTLVRLSRASGRVACNTTDL*ALITSQLRLAKDDAPSFXXXXXXXXXXXNHWRPQELKQ*VRAFMCLKRPTL*EFWTS 397 G WVLEE T TLLASQLTDCDFSEVEPAE TS DSS E NSE+K RSESLMKTLVRLSRASG VACNTTDL*ALITSQLRLAKDD SFRNLRLDLRLRRNHWRPQELKQ*VR FMCLKRPTL*+FWTS Subject 1728 GGWVLEEFTRTLLASQLTDCDFSEVEPAEPTSLIDSSCEANSELKAPLRSESLMKTLVRLSRASGSVACNTTDL*ALITSQLRLAKDDTLSFRNLRLDLRLRRNHWRPQELKQ*VRDFMCLKRPTL*DFWTS 2123
Range 3: 1729 to 2127 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
199.0 bits(428) | 0.0 | 99/133(74%) | 0/133(0%) | Minus/Minus |
Query 3 TRQLGA*RAHWNSASLTID*L*FLRG*TC*TNQSD*LII*D*FRGENII*IRISYENFS*A*QSFREGCL*HNRLVGLDNLTTKISKGRCSIFQKLEVGPSPKKEPLETTRIETISEGFYVLKKTHFVRILDL 401 +R+LGA R H N ASLT D*L* LRG* * N SD*LI+* *FR E I I + YENFS A*QSFRE CL*+NRLVGLDNLTTKISKGR SIFQKLEVGP K+EPLE TRIETISE FYVLK+ H VR LDL Subject 1729 SRRLGARRVH*NPASLTTD*L*LLRG*AS*AN*SD*LIM*G*FRIEGTIKIGVPYENFSQA*QSFRECCL*YNRLVGLDNLTTKISKGRYSIFQKLEVGPPLKEEPLEATRIETISERFYVLKEAHLVRFLDL 2127
Range 4: 1727 to 2128 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
188.5 bits(405) | 0.0 | 97/134(72%) | 0/134(0%) | Plus/Plus |
Query 1 VRSKILTKWVFLST*KPSLIVSILVVSNGSFLGEGPTSSF*KMEHRPLLILVVRLSRPTSLLCYRQPSLKLC*A*LKFS*EILI*MMFSPLN*SQMMSQSDWFVQQVQPLRNHSQSIVRLAEFQ*ALQAPSCLV 402 VRS+ LT+W LST* SLIVSILV SNGS L GPTSSF*K+E+RPLLILVVRLSRPTSLL YRQ SLKLC*A*LKFS* I M+ S LN* MMSQSD Q QPLR+HSQS+VRLA F * L+APS L+ Subject 1727 VRSRNLTRWASLST*NLSLIVSILVASNGSSLSGGPTSSF*KIEYRPLLILVVRLSRPTSLLYYRQHSLKLC*A*LKFS*GTPILMVPSILN*PHMMSQSD*LAQLAQPLRSHSQSVVRLAGF**TLRAPSRLL 2128
Range 5: 1727 to 1921 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
118.4 bits(252) | 0.0 | 52/65(80%) | 0/65(0%) | Minus/Minus |
Query 1 PVTQQTCRP**PHN*D*QRTMLHLSET*GWTFA*EGTIGDHKN*NNK*GLLCA*KDPLCKNFGPH 195 PV QQTCRP**PHN*D*QRT+L+LSET*GWT A* GTIG HKN*NNK* +LCA*+ P CK GPH Subject 1727 PVIQQTCRP**PHN*D*QRTILYLSET*GWTSA*GGTIGGHKN*NNK*EILCA*RGPPCKISGPH 1921
Range 6: 1970 to 2125 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
83.5 bits(176) | 0.0 | 37/52(71%) | 0/52(0%) | Minus/Minus |
Query 244 QAAGCLKSSLELC*PHN*LTVISQRLNLLNKPVRLTHHLRLIQR*KHHLDQN 399 QAAGC KSSLE C*PHN*LTV SQRL+ L++ V LTHH+RLIQ *+HH D++ Subject 1970 QAAGCSKSSLEPC*PHN*LTVTSQRLSQLSQLV*LTHHVRLIQN*RHH*DRS 2125
Range 7: 1728 to 1922 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
121.6 bits(259) | 0.0 | 53/65(82%) | 0/65(0%) | Plus/Plus |
Query 2 *GPKFLQSGSF*AHKSPHLLFQFLWSPMVPS*AKVQPQVSERWSIVLC*S*L*GYQGLQVCCVTG 196 *GP+ LQ G *AHK HLLFQFLW PMVP *A+VQPQVSER SIVLC*S*L*GYQGLQVCC+TG Subject 1728 *GPEILQGGPL*AHKISHLLFQFLWPPMVPP*AEVQPQVSER*SIVLC*S*L*GYQGLQVCCITG 1922
Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome
Sequence ID: JX559646.1 Length: 8726 Number of Matches: 8
Range 1: 1729 to 2124 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
258.6 bits(562) | 0.0 | 114/132(86%) | 0/132(0%) | Plus/Plus |
Query 3 EVQNSYKVGLFKHIKALTYCFNSCGLQWFLLRRRSNLKFLKDGASSFANLSCEVIKAYKSVVLQATLPEALLSLTKVFIRDSDLNDVFTSELISNDESVGLVCSAGSTSEKSQSVNCEASRVPVSSSSTQLP 398 EVQ SYKVGLFKHIK+LTYCFNSCGLQWFLL+RRSNLKFLKD SSFANLSC+VIKAYKSVVLQATLPEALLSLTKVFIRDSDLN F SEL S+DES+ LV SAGSTSEKSQSV+CEASRV V+SSSTQ P Subject 1729 EVQKSYKVGLFKHIKSLTYCFNSCGLQWFLLKRRSNLKFLKDRVSSFANLSCKVIKAYKSVVLQATLPEALLSLTKVFIRDSDLNGAFNSELASHDESIRLVGSAGSTSEKSQSVSCEASRVLVNSSSTQPP 2124
Range 2: 1728 to 2123 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
225.1 bits(485) | 0.0 | 114/132(86%) | 0/132(0%) | Minus/Minus |
Query 2 GSWVLEELTGTLLASQLTDCDFSEVEPAEQTSPTDSSFEINSEVKTSFRSESLMKTLVRLSRASGRVACNTTDL*ALITSQLRLAKDDAPSFXXXXXXXXXXXNHWRPQELKQ*VRAFMCLKRPTL*EFWTS 397 G WVLEE T TLLASQLTDCDFSEVEPAE TS DSS E NSE+K RSESLMKTLVRLSRASG VACNTTDL*ALIT QLRLAKDD SFRNLRLDLRLRRNHWRPQELKQ*VR FMCLKRPTL*+FWTS Subject 1728 GGWVLEEFTRTLLASQLTDCDFSEVEPAEPTSLIDSSCEANSELKAPLRSESLMKTLVRLSRASGSVACNTTDL*ALITLQLRLAKDDTLSFRNLRLDLRLRRNHWRPQELKQ*VRDFMCLKRPTL*DFWTS 2123
Range 3: 1729 to 2127 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
195.3 bits(420) | 0.0 | 97/133(73%) | 0/133(0%) | Minus/Minus |
Query 3 TRQLGA*RAHWNSASLTID*L*FLRG*TC*TNQSD*LII*D*FRGENII*IRISYENFS*A*QSFREGCL*HNRLVGLDNLTTKISKGRCSIFQKLEVGPSPKKEPLETTRIETISEGFYVLKKTHFVRILDL 401 +R+LGA R H N ASLT D*L* LRG* * N SD*LI+* *FR E I I + YENFS A*Q FRE CL*+NRLVGLDNLTTKISKGR SIFQK EVGP K+EPLE TRIETISE FYVLK+ H VR LDL Subject 1729 SRRLGARRVH*NPASLTTD*L*LLRG*AS*AN*SD*LIM*G*FRIEGTIKIGVPYENFSQA*QGFRECCL*YNRLVGLDNLTTKISKGRYSIFQKFEVGPPLKEEPLEATRIETISERFYVLKEAHLVRFLDL 2127
Range 4: 1727 to 2128 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
183.9 bits(395) | 0.0 | 95/134(71%) | 0/134(0%) | Plus/Plus |
Query 1 VRSKILTKWVFLST*KPSLIVSILVVSNGSFLGEGPTSSF*KMEHRPLLILVVRLSRPTSLLCYRQPSLKLC*A*LKFS*EILI*MMFSPLN*SQMMSQSDWFVQQVQPLRNHSQSIVRLAEFQ*ALQAPSCLV 402 VRS+ LT+W LST* SLIVSILV SNGS L GPTS+F*K+E+RPLLILVVRLSRPTSLL YRQ SLK C*A*LKFS* I M+ S LN* MMSQSD Q QPLR+HSQS+VRLA F * L+APS L+ Subject 1727 VRSRNLTRWASLST*NLSLIVSILVASNGSSLSGGPTSNF*KIEYRPLLILVVRLSRPTSLLYYRQHSLKPC*A*LKFS*GTPILMVPSILN*PHMMSQSD*LAQLAQPLRSHSQSVVRLAGF**TLRAPSRLL 2128
Range 5: 1727 to 1921 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.9 bits(240) | 0.0 | 50/65(77%) | 0/65(0%) | Minus/Minus |
Query 1 PVTQQTCRP**PHN*D*QRTMLHLSET*GWTFA*EGTIGDHKN*NNK*GLLCA*KDPLCKNFGPH 195 PV QQTCRP**P+N*D*QRT+L+LSE *GWT A* GTIG HKN*NNK* +LCA*+ P CK GPH Subject 1727 PVIQQTCRP**PYN*D*QRTILYLSEI*GWTSA*GGTIGGHKN*NNK*EILCA*RGPPCKISGPH 1921
Range 6: 1970 to 2125 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
83.5 bits(176) | 0.0 | 37/52(71%) | 0/52(0%) | Minus/Minus |
Query 244 QAAGCLKSSLELC*PHN*LTVISQRLNLLNKPVRLTHHLRLIQR*KHHLDQN 399 QAAGC KSSLE C*PHN*LTV SQRL+ L++ V LTHH+RLIQ *+HH D++ Subject 1970 QAAGCSKSSLEPC*PHN*LTVTSQRLSQLSQLV*LTHHVRLIQN*RHH*DRS 2125
Range 7: 1728 to 1922 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
121.1 bits(258) | 0.0 | 52/65(80%) | 0/65(0%) | Plus/Plus |
Query 2 *GPKFLQSGSF*AHKSPHLLFQFLWSPMVPS*AKVQPQVSERWSIVLC*S*L*GYQGLQVCCVTG 196 *GP+ LQ G *AHK HLLFQFLW PMVP *A+VQPQ+SER SIVLC*S*L*GYQGLQVCC+TG Subject 1728 *GPEILQGGPL*AHKISHLLFQFLWPPMVPP*AEVQPQISER*SIVLC*S*L*GYQGLQVCCITG 1922
Grapevine rupestris stem pitting associated virus isolate GRSPaV WA, complete genome
Sequence ID: KC427107.1 Length: 8742 Number of Matches: 8
Range 1: 1729 to 2124 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
254.1 bits(552) | 0.0 | 113/132(86%) | 0/132(0%) | Plus/Plus |
Query 3 EVQNSYKVGLFKHIKALTYCFNSCGLQWFLLRRRSNLKFLKDGASSFANLSCEVIKAYKSVVLQATLPEALLSLTKVFIRDSDLNDVFTSELISNDESVGLVCSAGSTSEKSQSVNCEASRVPVSSSSTQLP 398 EVQ SYKVGLFKHIK+LTYCFNSCGLQWFLL+RRSNLKFLKD SSFANLSCEVIKAY SVVLQATLPEALLSLTKVFIRDSDLN F SEL S+DES+ LV SAGST EKSQSV+CEASRV V+SSSTQ P Subject 1729 EVQKSYKVGLFKHIKSLTYCFNSCGLQWFLLKRRSNLKFLKDRVSSFANLSCEVIKAYMSVVLQATLPEALLSLTKVFIRDSDLNGDFNSELASHDESIRLVGSAGSTPEKSQSVSCEASRVLVNSSSTQPP 2124
Range 2: 1728 to 2123 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
224.2 bits(483) | 0.0 | 113/132(86%) | 0/132(0%) | Minus/Minus |
Query 2 GSWVLEELTGTLLASQLTDCDFSEVEPAEQTSPTDSSFEINSEVKTSFRSESLMKTLVRLSRASGRVACNTTDL*ALITSQLRLAKDDAPSFXXXXXXXXXXXNHWRPQELKQ*VRAFMCLKRPTL*EFWTS 397 G WVLEE T TLLASQLTDCDFS VEPAE TS DSS E NSE+K+ RSESLMKTLVRLSRASG VACNTTD+*ALITSQLRLAKDD SFRNLRLDLRLRRNHWRPQELKQ*VR FMCLKRPTL*+FWTS Subject 1728 GGWVLEEFTRTLLASQLTDCDFSGVEPAEPTSLIDSSCEANSELKSPLRSESLMKTLVRLSRASGSVACNTTDM*ALITSQLRLAKDDTLSFRNLRLDLRLRRNHWRPQELKQ*VRDFMCLKRPTL*DFWTS 2123
Range 3: 1729 to 2127 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
192.1 bits(413) | 0.0 | 97/133(73%) | 0/133(0%) | Minus/Minus |
Query 3 TRQLGA*RAHWNSASLTID*L*FLRG*TC*TNQSD*LII*D*FRGENII*IRISYENFS*A*QSFREGCL*HNRLVGLDNLTTKISKGRCSIFQKLEVGPSPKKEPLETTRIETISEGFYVLKKTHFVRILDL 401 +R+LGA R H N ASLT +*L* LRG* * N SD*LI+* *FR E I I + YENFS A*QSFRE CL*+NR VGLDNLTTKISKGR SIFQKLEVGP K+EPLE TRIETISE FYVLK+ H VR LDL Subject 1729 SRRLGARRVH*NPASLTTN*L*LLRG*AS*AN*SD*LIM*G*FRIEVTIKIGVPYENFSQA*QSFRECCL*YNRHVGLDNLTTKISKGRYSIFQKLEVGPPLKEEPLEATRIETISERFYVLKEAHLVRFLDL 2127
Range 4: 1727 to 2128 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
184.4 bits(396) | 0.0 | 95/134(71%) | 0/134(0%) | Plus/Plus |
Query 1 VRSKILTKWVFLST*KPSLIVSILVVSNGSFLGEGPTSSF*KMEHRPLLILVVRLSRPTSLLCYRQPSLKLC*A*LKFS*EILI*MMFSPLN*SQMMSQSDWFVQQVQPLRNHSQSIVRLAEFQ*ALQAPSCLV 402 VRS+ LT+W LST* SLIVSILV SNGS L GPTSSF*K+E+RPLLILVVRLSRPT LL YRQ SLKLC*A*LKFS* I M+ S LN* MMSQSD Q QPLR+HSQ +VRLA F * L+APS L+ Subject 1727 VRSRNLTRWASLST*NLSLIVSILVASNGSSLSGGPTSSF*KIEYRPLLILVVRLSRPTCLLYYRQHSLKLC*A*LKFS*GTPILMVTSILN*PHMMSQSD*LAQLAQPLRSHSQLVVRLAGF**TLRAPSRLL 2128
Range 5: 1727 to 1921 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
118.4 bits(252) | 0.0 | 52/65(80%) | 0/65(0%) | Minus/Minus |
Query 1 PVTQQTCRP**PHN*D*QRTMLHLSET*GWTFA*EGTIGDHKN*NNK*GLLCA*KDPLCKNFGPH 195 PV QQTCRP**PHN*D*QRT+L+LSET*GWT A* GTIG HKN*NNK* +LCA*+ P CK GPH Subject 1727 PVIQQTCRP**PHN*D*QRTILYLSET*GWTSA*GGTIGGHKN*NNK*EILCA*RGPPCKISGPH 1921
Range 6: 1970 to 2125 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.4 bits(167) | 0.0 | 36/52(69%) | 0/52(0%) | Minus/Minus |
Query 244 QAAGCLKSSLELC*PHN*LTVISQRLNLLNKPVRLTHHLRLIQR*KHHLDQN 399 QAAGC KSSLE C*PHN*LTV SQ L+ L++ V LTHH+RLIQ * HH D++ Subject 1970 QAAGCSKSSLEPC*PHN*LTVTSQGLSQLSQLV*LTHHVRLIQN*SHH*DRS 2125
Range 7: 1728 to 1922 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
119.3 bits(254) | 0.0 | 52/65(80%) | 0/65(0%) | Plus/Plus |
Query 2 *GPKFLQSGSF*AHKSPHLLFQFLWSPMVPS*AKVQPQVSERWSIVLC*S*L*GYQGLQVCCVTG 196 *GP+ LQ G *AHK HLLFQFLW PMVP *A+VQPQVSER SIVLC*S*L*GYQGL VCC+TG Subject 1728 *GPEILQGGPL*AHKISHLLFQFLWPPMVPP*AEVQPQVSER*SIVLC*S*L*GYQGLHVCCITG 1922
Grapevine rupestris stem pitting associated virus isolate TEMP BR replicase, 24.4 kDa protein, 12.8 kDa protein, 8.4 kDa protein, and 28 kDa protein genes, complete cds
Sequence ID: KX925556.1 Length: 8700 Number of Matches: 8
Range 1: 1718 to 2113 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
265.5 bits(577) | 0.0 | 114/132(86%) | 0/132(0%) | Plus/Plus |
Query 3 EVQNSYKVGLFKHIKALTYCFNSCGLQWFLLRRRSNLKFLKDGASSFANLSCEVIKAYKSVVLQATLPEALLSLTKVFIRDSDLNDVFTSELISNDESVGLVCSAGSTSEKSQSVNCEASRVPVSSSSTQLP 398 EVQNSYKVGLF+HIKALTYCFNSCGLQWF+L+RRSNLKFLKD ASSFA+LSCEVIK YKS+VLQATLPEALLSLTKVFIRDSDLND FTSEL SNDES+GLV SAGSTS Q VNCEA RVPV+SSS QLP Subject 1718 EVQNSYKVGLFRHIKALTYCFNSCGLQWFILKRRSNLKFLKDRASSFASLSCEVIKIYKSIVLQATLPEALLSLTKVFIRDSDLNDAFTSELASNDESIGLVRSAGSTSGNVQPVNCEAGRVPVNSSSIQLP 2113
Range 2: 1717 to 2112 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
229.7 bits(495) | 0.0 | 116/132(88%) | 0/132(0%) | Minus/Minus |
Query 2 GSWVLEELTGTLLASQLTDCDFSEVEPAEQTSPTDSSFEINSEVKTSFRSESLMKTLVRLSRASGRVACNTTDL*ALITSQLRLAKDDAPSFXXXXXXXXXXXNHWRPQELKQ*VRAFMCLKRPTL*EFWTS 397 GS +LEE TGTL ASQLT C F EVEPAE+TSP DSSFE NSEVK SFRSESLMKTLVRLSRASG VACNT DL* LITSQLRLAKDDA SFRNLRLDLRLR NHWRPQELKQ*VRAFMCLKRPTL*EFWTS Subject 1717 GS*MLEEFTGTLPASQLTGCTFPEVEPAERTSPIDSSFEANSEVKASFRSESLMKTLVRLSRASGSVACNTIDL*ILITSQLRLAKDDALSFRNLRLDLRLRMNHWRPQELKQ*VRAFMCLKRPTL*EFWTS 2112
Range 3: 1719 to 2117 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
212.8 bits(458) | 0.0 | 104/133(78%) | 0/133(0%) | Plus/Plus |
Query 4 RSKILTKWVFLST*KPSLIVSILVVSNGSFLGEGPTSSF*KMEHRPLLILVVRLSRPTSLLCYRQPSLKLC*A*LKFS*EILI*MMFSPLN*SQMMSQSDWFVQQVQPLRNHSQSIVRLAEFQ*ALQAPSCLV 402 RSKILTKWVFL T*K SLIVSIL VSNGS L EGPTSSF*++ HRPLL+L RLSR TSLL YRQ SLKLC*A*LKFS*EILI*MM SPLN* QMMSQSDWFVQ QPL SQ I RLA FQ* L+A +CL+ Subject 1719 RSKILTKWVFLGT*KLSLIVSILAVSNGSSLSEGPTSSF*RIGHRPLLVLAARLSRSTSLLYYRQHSLKLC*A*LKFS*EILI*MMPSPLN*PQMMSQSDWFVQLAQPLGMCSQLIARLAGFQ*TLRAFNCLL 2117
Range 4: 1718 to 2116 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
206.8 bits(445) | 0.0 | 101/133(76%) | 0/133(0%) | Minus/Minus |
Query 3 TRQLGA*RAHWNSASLTID*L*FLRG*TC*TNQSD*LII*D*FRGENII*IRISYENFS*A*QSFREGCL*HNRLVGLDNLTTKISKGRCSIFQKLEVGPSPKKEPLETTRIETISEGFYVLKKTHFVRILDL 401 +RQL A R HWN ASL I+ L RG* *TNQSD*LII* *FRGE II IRISYENFS A QSFRE CL*+NRLV LDNL K SKGRC I KLEVGPS K EPLET RIETISE FYV KKTHFVRILDL Subject 1718 SRQLNARRVHWNPASLAINWLHIPRG*AS*TNQSD*LII*G*FRGEGIIQIRISYENFSQAQQSFRECCL*YNRLVDLDNLAAKTSKGRCPIL*KLEVGPSLKDEPLETARIETISESFYVPKKTHFVRILDL 2116
Range 5: 1719 to 1910 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
108.7 bits(231) | 0.0 | 51/64(80%) | 0/64(0%) | Minus/Minus |
Query 4 PVTQQTCRP**PHN*D*QRTMLHLSET*GWTFA*EGTIGDHKN*NNK*GLLCA*KDPLCKNFGP 195 PV Q TCR **P +*D*QRTM + ET*GWTFA* TIGD KN*NNK* LLCA*KDPLCKNFGP Subject 1719 PVIQ*TCRS**PRS*D*QRTMPYPLET*GWTFA*G*TIGDRKN*NNK*ELLCA*KDPLCKNFGP 1910
Range 6: 1959 to 2114 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
86.8 bits(183) | 0.0 | 38/52(73%) | 0/52(0%) | Minus/Minus |
Query 244 QAAGCLKSSLELC*PHN*LTVISQRLNLLNKPVRLTHHLRLIQR*KHHLDQN 399 QA C KSSLE C P N*L SQRL+ LN+PVRLTHHLRLIQR*+HH DQN Subject 1959 QAVECSKSSLEPCQPRN*LAAHSQRLSQLNEPVRLTHHLRLIQR*RHHSDQN 2114
Range 7: 1720 to 1911 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
111.5 bits(237) | 0.0 | 52/64(81%) | 0/64(0%) | Plus/Plus |
Query 5 GPKFLQSGSF*AHKSPHLLFQFLWSPMVPS*AKVQPQVSERWSIVLC*S*L*GYQGLQVCCVTG 196 GPKFLQSGSF*AHKS HLLFQFL SPMV *AKVQPQVS+ IVLC*S*L GYQ LQV C+TG Subject 1720 GPKFLQSGSF*AHKSSHLLFQFLRSPMVHP*AKVQPQVSKG*GIVLC*S*LRGYQDLQVYCITG 1911
Range 8: 1948 to 2112 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
60.2 bits(125) | 0.0 | 37/55(67%) | 0/55(0%) | Plus/Plus |
Query 233 FHKRF*SK*CFHL*INLK**VSRTGLFSRFNL*EITVXXXXXXXXXXELFKHPAA 397 FHKRF*S+*C HL*I+LK**V+RTG FS NL E S L G Q SSELF+H A Subject 1948 FHKRF*SE*CLHL*ISLK**VNRTGSFSWLNLWECAAS*LRGWQGSSELFEHSTA 2112
Nucleotide Sequence (327 letters)
Query ID: | ds2016-132_4 |
Query definition: | No definition line |
Query length: | 951 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
255.4 | 1208.1 | 36% | 1.885e-66 | 81% | AB277783.1 | |
254.9 | 1219.4 | 31% | 2.59e-66 | 78% | KX274275.1 | |
248.5 | 1250.6 | 31% | 2.21e-64 | 85% | AY368590.1 | |
241.2 | 842.9 | 40% | 3.559e-62 | 54% | AF026278.1 | |
240.3 | 783.5 | 41% | 6.717e-62 | 47% | JX559646.1 |
Alignments
Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OB1
Sequence ID: AB277783.1 Length: 2876 Number of Matches: 8
Range 1: 605 to 928 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
255.4 bits(551) | 0.0 | 105/108(97%) | 0/108(0%) | Plus/Plus |
Query 3 RDMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGS 326 R+MGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALS+WHGVIIMNNLVKALSTFEFVG+YSVLRFPVVVHSVPGS Subject 605 REMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHGVIIMNNLVKALSTFEFVGIYSVLRFPVVVHSVPGS 928
Range 2: 606 to 926 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
202.7 bits(436) | 0.0 | 87/107(81%) | 0/107(0%) | Minus/Minus |
Query 4 YQERYERQLEI*AHYRHPQTQTWTKL*LSYS**SHHAKHLRPNL*LQTIQKLSISSCAYF*PGIAHSCSALQLLLHSSFQLTTRPTCRHRTPQLHNYQCSFPDYPCH 324 YQER E+QLEI*A Y++PQTQT TKL*LSYS**SHHAK+LRPNL*LQT QKLS SSC YF* G AHSCS LQL LHSSFQLTTRP CRHR PQLH+YQCS P YP H Subject 606 YQERCEQQLEI*ARYKYPQTQT*TKL*LSYS**SHHAKYLRPNL*LQTTQKLSTSSCVYF*LGTAHSCSVLQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFH 926
Range 3: 604 to 927 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
191.2 bits(411) | 0.0 | 88/108(81%) | 0/108(0%) | Plus/Plus |
Query 2 A*HG*SGKLH**LCN*GVLCLQVGRVVN*NDE*RRS*SALQLCAIPGQK*AQDEMLNFWIV*SYRLGLKCLAWCDYYE*LS*SFVHV*VCGCL*CAQISSCRS*RSW* 325 +*+G* G+LH**LCN*G+LCLQ GRVVN*NDE*R S*S LQLCA+P K* QDE+LNFW+V*SYRLGLK LAWCDYYE*LS*SFV+V*VCG L* AQISSC S RSW* Subject 604 S*NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*STLQLCAVPS*K*TQDEVLNFWVV*SYRLGLKYLAWCDYYE*LS*SFVYV*VCGYL*RAQISSCCSQRSW* 927
Range 4: 604 to 864 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
184.4 bits(396) | 0.0 | 84/87(97%) | 0/87(0%) | Minus/Minus |
Query 2 NVDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSMQFSRLPMSR 262 NVDKALTKLFIIITPCQ LKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSP+L*A*DTSIA*LSMQFSRLP+SR Subject 604 NVDKALTKLFIIITPCQILKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISR 864
Range 5: 719 to 925 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
137.6 bits(294) | 0.0 | 58/69(84%) | 0/69(0%) | Minus/Minus |
Query 117 TRNAMNDNWKSEHTIDTHKLKRGQSFN*VIHNNHTMPNT*GLIYSFKQSRN*ASHLVLISDQESHTVVV 323 TRNA+N+NWKSEH I+THKLKR QSFN*VIHNNHTMPNT*GLIYSFKQ RN*A HLV IS+ E HTVVV Subject 719 TRNAVNNNWKSEHAINTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQPRN*APHLVFISN*EPHTVVV 925
Range 6: 605 to 682 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
56.1 bits(116) | 0.0 | 21/26(81%) | 0/26(0%) | Minus/Minus |
Query 3 QLAQPVGIGHLNCIIINAVFQITHVT 80 QLAQPVGIG+LNCI+INAV Q+TH T Subject 605 QLAQPVGIGYLNCIVINAVLQVTHFT 682
Range 7: 720 to 926 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
120.2 bits(256) | 0.0 | 58/69(84%) | 0/69(0%) | Plus/Plus |
Query 118 TTTVCDSWSEISTR*DAQFLDCLKL*IRP*VFGMV*LL*IT*LKLCPRLSLWVSIVCSDFQLSFIAFLV 324 TTTVC S EI+TR* AQFL CLKL*IRP*VFGMV*LL*IT*LKLC RLSLWV I CSDFQL F AFLV Subject 720 TTTVCGS*LEINTR*GAQFLGCLKL*IRP*VFGMV*LL*IT*LKLCLRLSLWVFIACSDFQLLFTAFLV 926
Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome
Sequence ID: KX274275.1 Length: 8724 Number of Matches: 7
Range 1: 6349 to 6672 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
254.9 bits(550) | 0.0 | 106/108(98%) | 0/108(0%) | Plus/Plus |
Query 3 RDMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGS 326 R+MGNLENCIDNYAIEVSYAYRLGEL+IEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGS Subject 6349 REMGNLENCIDNYAIEVSYAYRLGELAIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGS 6672
Range 2: 6350 to 6670 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
211.4 bits(455) | 0.0 | 90/107(84%) | 0/107(0%) | Minus/Minus |
Query 4 YQERYERQLEI*AHYRHPQTQTWTKL*LSYS**SHHAKHLRPNL*LQTIQKLSISSCAYF*PGIAHSCSALQLLLHSSFQLTTRPTCRHRTPQLHNYQCSFPDYPCH 324 YQERYE+QLEI*A Y+HPQTQT TKL*LSYS**SHHAKHLRPNL*LQT QKLS SSCAYF* G AHSCS LQL LHSSFQL TRP CRHR PQLH+YQCS P YP H Subject 6350 YQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*LGTAHSCSVLQLPLHSSFQLPTRPACRHRIPQLHSYQCSSPGYPFH 6670
Range 3: 6348 to 6671 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
202.2 bits(435) | 0.0 | 91/108(84%) | 0/108(0%) | Plus/Plus |
Query 2 A*HG*SGKLH**LCN*GVLCLQVGRVVN*NDE*RRS*SALQLCAIPGQK*AQDEMLNFWIV*SYRLGLKCLAWCDYYE*LS*SFVHV*VCGCL*CAQISSCRS*RSW* 325 +*+G* G+LH**LCN*G+LCLQ GRV N*NDE*R S*S LQLCA+P K*AQDE+LNFW+V*SYRLGLKCLAWCDYYE*LS*SFV+V*VCGCL* AQISSC S*RSW* Subject 6348 S*NG*PGELH**LCN*GILCLQAGRVGN*NDE*RGS*STLQLCAVPS*K*AQDEVLNFWVV*SYRLGLKCLAWCDYYE*LS*SFVYV*VCGCL*RAQISSCCS*RSW* 6671
Range 4: 6349 to 6669 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
188.0 bits(404) | 0.0 | 90/107(84%) | 0/107(0%) | Minus/Minus |
Query 3 TRNAMNDNWKSEHTIDTHKLKRGQSFN*VIHNNHTMPNT*GLIYSFKQSRN*ASHLVLISDQESHTVVVRXXXXXXXXXX*QLAQPVGIGHLNCIIINAVFQITHVT 323 TRNAMN+NWKSEH I+THKLKR QSFN*VIHNNHTMPNT*GLIYSFKQ RN*A HLVLIS+ E HTVVV FNF FIHHFN QLAQPVGIG+LNCI+INAV Q+TH T Subject 6349 TRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQPRN*APHLVLISN*EPHTVVVCFNFLFIHHFNCQLAQPVGIGYLNCIVINAVLQVTHFT 6669
Range 5: 6348 to 6608 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
183.4 bits(394) | 0.0 | 84/87(97%) | 0/87(0%) | Minus/Minus |
Query 2 NVDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSMQFSRLPMSR 262 NVDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISI NSP+L*A*DTSIA*LSMQFSRLP+SR Subject 6348 NVDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIANSPSL*A*DTSIA*LSMQFSRLPISR 6608
Range 6: 6464 to 6670 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.9 bits(264) | 0.0 | 60/69(87%) | 0/69(0%) | Plus/Plus |
Query 118 TTTVCDSWSEISTR*DAQFLDCLKL*IRP*VFGMV*LL*IT*LKLCPRLSLWVSIVCSDFQLSFIAFLV 324 TTTVC S EISTR* AQFL CLKL*IRP*VFGMV*LL*IT*LKLC RLSLWV I CSDFQL FIAFLV Subject 6464 TTTVCGS*LEISTR*GAQFLGCLKL*IRP*VFGMV*LL*IT*LKLCLRLSLWVFIACSDFQLLFIAFLV 6670
Rupestris stem pitting associated virus strain Syrah, complete genome
Sequence ID: AY368590.1 Length: 8742 Number of Matches: 7
Range 1: 6349 to 6672 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
248.5 bits(536) | 0.0 | 105/108(97%) | 0/108(0%) | Plus/Plus |
Query 3 RDMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGS 326 R+MGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWH IIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGS Subject 6349 REMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHY*IIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGS 6672
Range 2: 6350 to 6670 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
224.2 bits(483) | 0.0 | 95/107(89%) | 0/107(0%) | Minus/Minus |
Query 4 YQERYERQLEI*AHYRHPQTQTWTKL*LSYS**SHHAKHLRPNL*LQTIQKLSISSCAYF*PGIAHSCSALQLLLHSSFQLTTRPTCRHRTPQLHNYQCSFPDYPCH 324 YQERYE+QLEI*A Y+HPQTQT TKL*LSYS**S++AKHLRPNL*LQTIQKLSISSCAYF*PG AHSCSALQL LHSSFQLTTRPTCRHRTPQLHNYQC+FP P H Subject 6350 YQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SNNAKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQLPLHSSFQLTTRPTCRHRTPQLHNYQCNFPGCPFH 6670
Range 3: 6348 to 6671 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
203.6 bits(438) | 0.0 | 96/108(89%) | 0/108(0%) | Plus/Plus |
Query 2 A*HG*SGKLH**LCN*GVLCLQVGRVVN*NDE*RRS*SALQLCAIPGQK*AQDEMLNFWIV*SYRLGLKCLAWCDYYE*LS*SFVHV*VCGCL*CAQISSCRS*RSW* 325 +*+G GKLH**LCN*GVLCLQVGRVVN*NDE*R S*SALQLCA+PG K*AQDEMLNFWIV*SYRLGLKCLA DYYE*LS*SFV+V*VCGCL* AQISSC S*RSW* Subject 6348 S*NGQPGKLH**LCN*GVLCLQVGRVVN*NDE*RGS*SALQLCAVPG*K*AQDEMLNFWIV*SYRLGLKCLALLDYYE*LS*SFVYV*VCGCL*RAQISSCCS*RSW* 6671
Range 4: 6349 to 6669 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.4 bits(418) | 0.0 | 94/107(88%) | 0/107(0%) | Minus/Minus |
Query 3 TRNAMNDNWKSEHTIDTHKLKRGQSFN*VIHNNHTMPNT*GLIYSFKQSRN*ASHLVLISDQESHTVVVRXXXXXXXXXX*QLAQPVGIGHLNCIIINAVFQITHVT 323 TRNAMN+NWKSEH I+THKLKR QSFN*VIHNN MPNT*GLIYSFKQSRN*ASHLVLIS+QE HTVVVRFNF FIHHFN*QLAQPVGIGHLNCIIINA+FQ+ H T Subject 6349 TRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNLIMPNT*GLIYSFKQSRN*ASHLVLISNQEPHTVVVRFNFLFIHHFN*QLAQPVGIGHLNCIIINAIFQVAHFT 6669
Range 5: 6348 to 6608 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
180.2 bits(387) | 0.0 | 84/87(97%) | 0/87(0%) | Minus/Minus |
Query 2 NVDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSMQFSRLPMSR 262 NVDKALTKLFIII CQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSMQFSRLP+SR Subject 6348 NVDKALTKLFIII**CQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSMQFSRLPISR 6608
Range 6: 6461 to 6670 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
134.9 bits(288) | 0.0 | 61/70(87%) | 0/70(0%) | Plus/Plus |
Query 115 RTTTVCDSWSEISTR*DAQFLDCLKL*IRP*VFGMV*LL*IT*LKLCPRLSLWVSIVCSDFQLSFIAFLV 324 RTTTVC SW EISTR*DAQFLDCLKL*IRP*VFG++ LL*IT*LKLC RLSLWV I CSDFQL FIAFLV Subject 6461 RTTTVCGSWLEISTR*DAQFLDCLKL*IRP*VFGIIRLL*IT*LKLCLRLSLWVFIACSDFQLLFIAFLV 6670
Grapevine Rupestris stem pitting associated virus, complete genome
Sequence ID: AF026278.1 Length: 8725 Number of Matches: 8
Range 1: 6349 to 6672 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
241.2 bits(520) | 0.0 | 99/108(92%) | 0/108(0%) | Plus/Plus |
Query 3 RDMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGS 326 R+MGNLENCIDNYAIEVSYAYRLGELSIEMM EEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALS+WH + IMNNLVKALSTFEFVGV+SVL+FPVV+HSVPGS Subject 6349 REMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHYLSIMNNLVKALSTFEFVGVFSVLKFPVVIHSVPGS 6672
Range 2: 6351 to 6608 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
143.1 bits(306) | 0.0 | 68/86(79%) | 0/86(0%) | Minus/Minus |
Query 5 NVDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSMQFSRLPMS 262 NVD ALTKLFII+ CQ LKA*SIASN PEIEHLILCLFLT+N TQL* ASTSSS IIS+D+SP+ A*+TSIA*LS+QFSRLP+S Subject 6351 NVDNALTKLFIILK*CQILKA*SIASNRPEIEHLILCLFLTKNLTQL*WASTSSSVIISMDSSPSRYA*ETSIA*LSIQFSRLPIS 6608
Range 3: 6463 to 6669 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
98.7 bits(209) | 0.0 | 42/69(61%) | 0/69(0%) | Minus/Minus |
Query 117 TRNAMNDNWKSEHTIDTHKLKRGQSFN*VIHNNHTMPNT*GLIYSFKQSRN*ASHLVLISDQESHTVVV 323 TR+ MND WK +HT +T+KLK Q FN*+IHN MPNT*GLI FK + N*ASHL+L+ DQES+T+++ Subject 6463 TRHTMNDYWKFKHTENTYKLKC*QCFN*IIHNTQIMPNT*GLINRFK*A*N*ASHLMLVPDQESNTIIM 6669
Range 4: 6352 to 6423 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
34.5 bits(69) | 0.0 | 13/24(54%) | 0/24(0%) | Minus/Minus |
Query 6 LAQPVGIGHLNCIIINAVFQITHV 77 L+QPV IG L II+N + Q+TH+ Subject 6352 LSQPVRIGDLYRIIVNTILQVTHL 6423
Range 5: 6357 to 6671 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
108.7 bits(231) | 0.0 | 59/105(56%) | 0/105(0%) | Plus/Plus |
Query 11 G*SGKLH**LCN*GVLCLQVGRVVN*NDE*RRS*SALQLCAIPGQK*AQDEMLNFWIV*SYRLGLKCLAWCDYYE*LS*SFVHV*VCGCL*CAQISSCRS*RSW* 325 G* G+L+* LC+ G+LC+ GR ++*ND+ RS L LC I GQ+ A DEMLNF +*S LGLK LA +YYE* S*S V++*VC C CA ISS S* +W* Subject 6357 G*PGELY*QLCDRGLLCVPAGRAIH*NDDRGRSGGPL*LC*ILGQEQA*DEMLNFRPI*SD*LGLKYLALFEYYE*FS*SIVNI*VCRCFQCA*ISSSHS*CAW* 6671
Range 6: 6356 to 6670 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
103.2 bits(219) | 0.0 | 57/105(54%) | 0/105(0%) | Minus/Minus |
Query 10 YQERYERQLEI*AHYRHPQTQTWTKL*LSYS**SHHAKHLRPNL*LQTIQKLSISSCAYF*PGIAHSCSALQLLLHSSFQLTTRPTCRHRTPQLHNYQCSFPDYP 324 YQ YE LEI*AH +H QTQ T L*L+YS* S++AK+LRPN LQ KLSISS A *P I H+ + LL SSFQ P HR P HN Q + P YP Subject 6356 YQAHYE*LLEI*AH*KHLQTQMLTML*LNYS*YSNNAKYLRPNQSLQIGLKLSISSYACS*PRI*HNYNGPPLLPRSSFQWIALPAGTHRRPLSHNCQYNSPGYP 6670
Range 7: 6473 to 6670 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
76.7 bits(161) | 0.0 | 42/66(64%) | 0/66(0%) | Plus/Plus |
Query 127 VCDSWSEISTR*DAQFLDCLKL*IRP*VFGMV*LL*IT*LKLCPRLSLWVSIVCSDFQLSFIAFLV 324 V DSWS S R*DAQF LK IRP*VFG++*+L*I *LK C LSL V VC +FQ SFI LV Subject 6473 VLDSWSGTSIR*DAQFQAYLKRLIRP*VFGII*VL*II*LKHCQHLSL*VFSVCLNFQ*SFIVCLV 6670
Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome
Sequence ID: JX559646.1 Length: 8726 Number of Matches: 9
Range 1: 6349 to 6672 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
240.3 bits(518) | 0.0 | 97/108(90%) | 0/108(0%) | Plus/Plus |
Query 3 RDMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGS 326 R+MGNLENCIDNYAIEVSYAYRLGELSIEMM EEEVEAHYNCVRFLVRNKHKMRCSISGLFEA+D*ALS+WH + IMNNLVKALSTFEF+GV+SVL+FPVV+HSVPGS Subject 6349 REMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAVD*ALSIWHCLSIMNNLVKALSTFEFIGVFSVLKFPVVIHSVPGS 6672
Range 2: 6351 to 6605 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
154.6 bits(331) | 0.0 | 72/85(85%) | 0/85(0%) | Minus/Minus |
Query 5 VDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSMQFSRLPMS 259 VD ALTKLFII+ CQ LKA*S ASN PEIEHLILCLFLTRN TQL*CASTSSS IIS+D+SPNL A*DTSIA*LSMQFSRLP+S Subject 6351 VDNALTKLFIILKQCQILKA*STASNRPEIEHLILCLFLTRNLTQL*CASTSSSVIISMDSSPNLYA*DTSIA*LSMQFSRLPIS 6605
Range 3: 6463 to 6666 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
81.7 bits(172) | 0.0 | 36/68(53%) | 0/68(0%) | Minus/Minus |
Query 117 RNAMNDNWKSEHTIDTHKLKRGQSFN*VIHNNHTMPNT*GLIYSFKQSRN*ASHLVLISDQESHTVVV 320 R M ++WK +HT +T+K + Q FN +IHN TMPNT*GLI FK + N*A HL+L+ + E HT+VV Subject 6463 RYTMYNDWKFKHTENTYKFEG*QCFNQIIHNTQTMPNT*GLINRFK*A*N*APHLMLVPN*EPHTIVV 6666
Range 4: 6356 to 6442 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.0 bits(81) | 0.0 | 16/29(55%) | 0/29(0%) | Minus/Minus |
Query 10 SSFQLTTRPTCRHRTPQLHNYQCSFPDYP 96 SSF+ P HRTP HNYQCS D P Subject 6356 SSFRWIAHPIYMHRTPLSHNYQCSSLDCP 6442
Range 5: 6357 to 6668 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
87.7 bits(185) | 0.0 | 49/104(47%) | 0/104(0%) | Plus/Plus |
Query 11 G*SGKLH**LCN*GVLCLQVGRVVN*NDE*RRS*SALQLCAIPGQK*AQDEMLNFWIV*SYRLGLKCLAWCDYYE*LS*SFVHV*VCGCL*CAQISSCRS*RSW 322 G S +LH**LC+ GVLC+ +G ++ ND+ LQLC +P + A DE+LNF +*S LGLK LA +YYE* *S V++ + C CA ISS +* +W Subject 6357 GQSRELH**LCDRGVLCI*IG*AIHRNDDRGGGGGTLQLCEVPS*EQA*DEVLNFRPI*SG*LGLKYLALFEYYE*FG*SIVNLRIYRCFQCA*ISSRYT*CTW 6668
Range 6: 6464 to 6667 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.8 bits(111) | 0.0 | 35/68(51%) | 0/68(0%) | Plus/Plus |
Query 118 TTTVCDSWSEISTR*DAQFLDCLKL*IRP*VFGMV*LL*IT*LKLCPRLSLWVSIVCSDFQLSFIAFL 321 TT V S S R* AQF LK IRP*VFG+V*+L*I LK C +L V VC +FQ +I +L Subject 6464 TTIV*GS*LGTSIR*GAQFQAYLKRLIRP*VFGIV*VL*IIWLKHCQPSNL*VFSVCLNFQSLYIVYL 6667
Range 7: 6356 to 6424 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
36.3 bits(73) | 0.0 | 14/23(61%) | 0/23(0%) | Plus/Plus |
Query 10 WVIWKTALIIMQLRCPMPTGWAS 78 W I +TALIIM+ RCPM W S Subject 6356 WAI*RTALIIMR*RCPMHIDWVS 6424
Range 8: 6464 to 6667 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
58.3 bits(121) | 0.0 | 35/68(51%) | 0/68(0%) | Minus/Minus |
Query 118 QERYERQLEI*AHYRHPQTQTWTKL*LSYS**SHHAKHLRPNL*LQTIQKLSISSCAYF*PGIAHSCS 321 Q Y +LEI*AH +H + T L* +YS* S++AK+LRPN LQ KLS SS A * G +H+CS Subject 6464 QVHYV*RLEI*AH*KHL*IRRLTML*PNYS*YSNNAKYLRPNQPLQIGLKLSTSSYACS*LGTSHNCS 6667
Nucleotide Sequence (350 letters)
Query ID: | ds2016-132_4 |
Query definition: | No definition line |
Query length: | 951 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
273.7 | 1412.7 | 33% | 6.456e-72 | 93% | FR691076.1 | |
270.0 | 1274.1 | 21% | 8.193e-71 | 82% | KX925556.1 | |
270.0 | 1335.3 | 33% | 8.193e-71 | 88% | KX274276.1 | |
271.9 | 1336.3 | 33% | 2.3e-71 | 88% | JX559646.1 | |
269.6 | 1325.7 | 33% | 1.126e-70 | 88% | AY881626.1 |
Alignments
Grapevine rupestris stem pitting associated virus complete genome, genomic RNA, isolate GRSPaV MG
Sequence ID: FR691076.1 Length: 8749 Number of Matches: 7
Range 1: 3226 to 3573 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
273.7 bits(591) | 0.0 | 112/116(97%) | 0/116(0%) | Plus/Plus |
Query 2 QIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGFALKAGIRSFVESERLISSDLSAPTISKQLEENACAESEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILSSK 349 QIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGFALKAGIRSFVESERLISSDLSAPTISKQLEENA AE+EMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGIL K Subject 3226 QIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGFALKAGIRSFVESERLISSDLSAPTISKQLEENAYAENEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLK 3573
Range 2: 3226 to 3573 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
254.9 bits(550) | 0.0 | 108/116(93%) | 0/116(0%) | Minus/Minus |
Query 2 LGGKNST*GPLTFPKFPTNFIFWCYYYQPYVVPDTK*CNHLTLGTSILLQLFRNSWS*KI*TNKALTLHKRSNAGLQSKTISTEQETN*MPKAIAITRYGESVKIINIIISTCLNL 349 L KNST*GPLTFPK PTNFIFWCYYYQPYVVPDTK*CNHL LG SIL QLFRN WS*KI*TNKALTLHKRSNAGLQSKTISTEQ+TN*MPKAIAITRYGESVKIINIIISTCLNL Subject 3226 LQAKNST*GPLTFPKLPTNFIFWCYYYQPYVVPDTK*CNHLILGISILFQLFRNGWS*KI*TNKALTLHKRSNAGLQSKTISTEQKTN*MPKAIAITRYGESVKIINIIISTCLNL 3573
Range 3: 3227 to 3565 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
230.6 bits(497) | 0.0 | 109/113(96%) | 0/113(0%) | Minus/Minus |
Query 3 KEFHIGATHFPQISNXXXXXXXXXXXLRGAGYKIMQSSHSRHKHSPPIV*K*LELKDLN**GAHSPQKIECRPSEQNHQY*ARNQLNAKSNCHHQVRRKC*NHQYHNQHMPQS 341 KEFHIGATHFPQ SN*LHILVLLLSALRGAGYKIMQSSHSRHKHS PIV*K LELKDLN**GAHSPQKIECRPSEQNHQY*A NQLNAKSNCHHQVRRKC*NHQYHNQHMPQS Subject 3227 KEFHIGATHFPQTSN*LHILVLLLSALRGAGYKIMQSSHSRHKHSLPIV*KWLELKDLN**GAHSPQKIECRPSEQNHQY*AENQLNAKSNCHHQVRRKC*NHQYHNQHMPQS 3565
Range 4: 3261 to 3566 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
229.7 bits(498) | 0.0 | 97/102(95%) | 0/102(0%) | Minus/Minus |
Query 37 ERIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQNNAIISLSAQAFSSNCLEIVGAERSELIRRSLSTKDRMPAFRAKPSVLSKKPTECQKQLPSPGTEKVLK 342 +RIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQNNAIIS SA AFSSNCLE+VGAERSELIRRSLSTKDRMPAFRAKPSVLS+KPTECQKQLPSPGTEKVLK Subject 3261 QRIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQNNAIISFSA*AFSSNCLEMVGAERSELIRRSLSTKDRMPAFRAKPSVLSRKPTECQKQLPSPGTEKVLK 3566
Range 5: 3225 to 3383 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
126.6 bits(270) | 0.0 | 52/53(98%) | 0/53(0%) | Plus/Plus |
Query 1 PD*GMC*L*Y**F*HFLRTW*WQLLLAFSWFLAQY*WFCSEGRHSIFCGE*AP 159 PD*GMC*L*Y**F*HFLRTW*WQLLLAFSWF AQY*WFCSEGRHSIFCGE*AP Subject 3225 PD*GMC*L*Y**F*HFLRTW*WQLLLAFSWFSAQY*WFCSEGRHSIFCGE*AP 3383
Range 6: 3420 to 3563 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.4 bits(239) | 0.0 | 46/48(96%) | 0/48(0%) | Plus/Plus |
Query 196 TIGGECLCRE*DDCIILYPAPRKADSSNTRI*S*LEIWGK*VAPMWNS 339 TIG ECLCRE*DDCIILYPAPRKADSSNTRI*S*LE+WGK*VAPMWNS Subject 3420 TIGRECLCRE*DDCIILYPAPRKADSSNTRI*S*LEVWGK*VAPMWNS 3563
Range 7: 3227 to 3565 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
184.8 bits(397) | 0.0 | 107/113(95%) | 0/113(0%) | Plus/Plus |
Query 3 RLRHVLIMILMILTLSPYLVMAIAFGIQXXXXXXXXXXXXRPAFDLLWRVSAXXXXXXXXXXXXNNWRRMLVPRVR*LHYFVSGTT*G****HQNMKLVGNLGKVSGPYVEFF 341 RLRHVLIMILMILTLSPYLVMAIAFGIQLV CSVLMVLL*RPAFDLLWRVSALLVQIFQLQ FLNNW+RML+PR+R*LHYFVSGTT*G****HQNMKLVG+LGKVSGPYVEFF Subject 3227 RLRHVLIMILMILTLSPYLVMAIAFGIQLVFCSVLMVLL*RPAFDLLWRVSALLVQIFQLQPFLNNWKRMLMPRMR*LHYFVSGTT*G****HQNMKLVGSLGKVSGPYVEFF 3565
Grapevine rupestris stem pitting associated virus isolate TEMP BR replicase, 24.4 kDa protein, 12.8 kDa protein, 8.4 kDa protein, and 28 kDa protein genes, complete cds
Sequence ID: KX925556.1 Length: 8700 Number of Matches: 8
Range 1: 3215 to 3562 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
270.0 bits(583) | 0.0 | 109/116(94%) | 0/116(0%) | Plus/Plus |
Query 2 QIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGFALKAGIRSFVESERLISSDLSAPTISKQLEENACAESEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILSSK 349 QIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDG ALKAGIRSFVESERL+SSDLSAPT+SKQLEENA AE+EMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGIL K Subject 3215 QIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESERLVSSDLSAPTVSKQLEENAYAENEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLK 3562
Range 2: 3250 to 3555 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.8 bits(494) | 0.0 | 97/102(95%) | 0/102(0%) | Minus/Minus |
Query 37 ERIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQNNAIISLSAQAFSSNCLEIVGAERSELIRRSLSTKDRMPAFRAKPSVLSKKPTECQKQLPSPGTEKVLK 342 +RIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQNNAIIS SA AFSSNCLE VGAERSEL RRSLSTKDRMPAFRAKPSVLSKKPTECQKQLPSPGTEKVLK Subject 3250 QRIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQNNAIISFSA*AFSSNCLETVGAERSELTRRSLSTKDRMPAFRAKPSVLSKKPTECQKQLPSPGTEKVLK 3555
Range 3: 3215 to 3562 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
221.9 bits(478) | 0.0 | 95/116(82%) | 0/116(0%) | Minus/Minus |
Query 2 LGGKNST*GPLTFPKFPTNFIFWCYYYQPYVVPDTK*CNHLTLGTSILLQLFRNSWS*KI*TNKALTLHKRSNAGLQSKTISTEQETN*MPKAIAITRYGESVKIINIIISTCLNL 349 L KNST*GPLTFPKFPTNFIFWCYYYQ Y+VPDT+ CNHL L SI QLFRN WS*KI*TN ALTLHKRSNA LQS T+STE ETN*MPKAIA+TRY ES+KIINIIISTCL L Subject 3215 LQAKNST*GPLTFPKFPTNFIFWCYYYQSYMVPDTEQCNHLILSISIFFQLFRNGWS*KI*TN*ALTLHKRSNASLQS*TVSTE*ETN*MPKAIAVTRYRESIKIINIIISTCLYL 3562
Range 4: 3216 to 3554 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
198.1 bits(426) | 0.0 | 96/113(85%) | 0/113(0%) | Minus/Minus |
Query 3 KEFHIGATHFPQISNXXXXXXXXXXXLRGAGYKIMQSSHSRHKHSPPIV*K*LELKDLN**GAHSPQKIECRPSEQNHQY*ARNQLNAKSNCHHQVRRKC*NHQYHNQHMPQS 341 KEFHIGATHFPQISN*LHILVLLLS L GAGY+ MQSSHS+HKH PIV*K LELKDLN* GAHSPQKIEC+PSE N QY* RNQLNAKSNC HQV+RK *NHQYHNQHMP S Subject 3216 KEFHIGATHFPQISN*LHILVLLLSVLHGAGYRTMQSSHSQHKHFLPIV*KRLELKDLN*LGAHSPQKIECQPSELNRQY*VRNQLNAKSNCRHQVQRKY*NHQYHNQHMPLS 3554
Range 5: 3409 to 3552 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.0 bits(214) | 0.0 | 42/48(88%) | 0/48(0%) | Plus/Plus |
Query 196 TIGGECLCRE*DDCIILYPAPRKADSSNTRI*S*LEIWGK*VAPMWNS 339 TIG +CLC E*DDCI+LYPAP K DSSNTRI*S*LEIWGK*VAPMWNS Subject 3409 TIGRKCLC*E*DDCIVLYPAPCKTDSSNTRI*S*LEIWGK*VAPMWNS 3552
Range 6: 3214 to 3372 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
97.7 bits(207) | 0.0 | 45/53(85%) | 0/53(0%) | Plus/Plus |
Query 1 PD*GMC*L*Y**F*HFLRTW*WQLLLAFSWFLAQY*WFCSEGRHSIFCGE*AP 159 PD GMC*L*Y**F*+FL TW* QLLLAFSWFL QY* F SEG HSIFCGE*AP Subject 3214 PDRGMC*L*Y**F*YFLCTW*RQLLLAFSWFLTQY*RFSSEGWHSIFCGE*AP 3372
Range 7: 3336 to 3554 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
107.4 bits(228) | 0.0 | 61/73(84%) | 0/73(0%) | Plus/Plus |
Query 123 RPAFDLLWRVSAXXXXXXXXXXXXNNWRRMLVPRVR*LHYFVSGTT*G****HQNMKLVGNLGKVSGPYVEFF 341 R AFDLLWRVSA LVQIFQLQ FLNNW++ML+ R+R*LH VSGT * ****HQNMKLVGNLGKVSGPYVEFF Subject 3336 RLAFDLLWRVSA*LVQIFQLQPFLNNWKKMLMLRMR*LHCSVSGTM*D****HQNMKLVGNLGKVSGPYVEFF 3554
Grapevine rupestris stem pitting associated virus isolate SK704 C, complete genome
Sequence ID: KX274276.1 Length: 8726 Number of Matches: 7
Range 1: 3227 to 3574 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
270.0 bits(583) | 0.0 | 109/116(94%) | 0/116(0%) | Plus/Plus |
Query 2 QIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGFALKAGIRSFVESERLISSDLSAPTISKQLEENACAESEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILSSK 349 QIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDG ALKAGIRSFVESERL+SSDLSAPTISKQLEENA AE+EMIALFC+RHHVRLIVVTPEYEVSWKFGESEWPLCGIL K Subject 3227 QIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESERLVSSDLSAPTISKQLEENAYAENEMIALFCVRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLK 3574
Range 2: 3227 to 3574 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
241.6 bits(521) | 0.0 | 102/116(88%) | 0/116(0%) | Minus/Minus |
Query 2 LGGKNST*GPLTFPKFPTNFIFWCYYYQPYVVPDTK*CNHLTLGTSILLQLFRNSWS*KI*TNKALTLHKRSNAGLQSKTISTEQETN*MPKAIAITRYGESVKIINIIISTCLNL 349 L KNST* PLTFPKFPTNFIFWCY+YQPYVVPDTK*CNH ILLQLFRNSWS*KI*TN+A T H+RSNAGLQSKTISTEQETN*MPKAIAITRYGESVKIINIIISTCLNL Subject 3227 LQAKNST*RPLTFPKFPTNFIFWCYHYQPYVVPDTK*CNHFIFSIGILLQLFRNSWS*KI*TNQAFTFHERSNAGLQSKTISTEQETN*MPKAIAITRYGESVKIINIIISTCLNL 3574
Range 3: 3262 to 3567 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
226.5 bits(491) | 0.0 | 96/102(94%) | 0/102(0%) | Minus/Minus |
Query 37 ERIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQNNAIISLSAQAFSSNCLEIVGAERSELIRRSLSTKDRMPAFRAKPSVLSKKPTECQKQLPSPGTEKVLK 342 +RIPHRGHSLSPNFQLTSYSGVTTISLTWCR QNNAIIS SA AFSSNCLEIVGAERSEL RRSLSTKDRMPAFRA+PSVLSKKPTECQKQLPSPGTEKVLK Subject 3262 QRIPHRGHSLSPNFQLTSYSGVTTISLTWCRTQNNAIISFSA*AFSSNCLEIVGAERSELTRRSLSTKDRMPAFRARPSVLSKKPTECQKQLPSPGTEKVLK 3567
Range 4: 3228 to 3566 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
216.4 bits(466) | 0.0 | 101/113(89%) | 0/113(0%) | Minus/Minus |
Query 3 KEFHIGATHFPQISNXXXXXXXXXXXLRGAGYKIMQSSHSRHKHSPPIV*K*LELKDLN**GAHSPQKIECRPSEQNHQY*ARNQLNAKSNCHHQVRRKC*NHQYHNQHMPQS 341 KEFHI ATHFPQISN*LHILVL LSALRGAG+KIMQS H +H+HSPPIV*K*LELKDLN* G H P+KIECRPSEQ+HQY*ARNQLNAKSNCHHQVRRKC*NHQYHNQHMPQS Subject 3228 KEFHIEATHFPQISN*LHILVLPLSALRGAGHKIMQSFHFQHRHSPPIV*K*LELKDLN*PGVHFPRKIECRPSEQDHQY*ARNQLNAKSNCHHQVRRKC*NHQYHNQHMPQS 3566
Range 5: 3226 to 3384 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
116.5 bits(248) | 0.0 | 49/53(92%) | 0/53(0%) | Plus/Plus |
Query 1 PD*GMC*L*Y**F*HFLRTW*WQLLLAFSWFLAQY*WFCSEGRHSIFCGE*AP 159 PD*GMC*L*Y**F*HFLRTW*WQLLLAFSWFLAQY*W CSEGRHSIF G+* P Subject 3226 PD*GMC*L*Y**F*HFLRTW*WQLLLAFSWFLAQY*WSCSEGRHSIFRGK*TP 3384
Range 6: 3421 to 3564 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
98.7 bits(209) | 0.0 | 42/48(88%) | 0/48(0%) | Plus/Plus |
Query 196 TIGGECLCRE*DDCIILYPAPRKADSSNTRI*S*LEIWGK*VAPMWNS 339 TIGGECLC +*+DCIIL PAPRKADS NTRI*S*LEIWGK*VA MWNS Subject 3421 TIGGECLC*K*NDCIILCPAPRKADSGNTRI*S*LEIWGK*VASMWNS 3564
Range 7: 3228 to 3566 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
165.6 bits(355) | 0.0 | 101/113(89%) | 0/113(0%) | Plus/Plus |
Query 3 RLRHVLIMILMILTLSPYLVMAIAFGIQXXXXXXXXXXXXRPAFDLLWRVSAXXXXXXXXXXXXNNWRRMLVPRVR*LHYFVSGTT*G****HQNMKLVGNLGKVSGPYVEFF 341 RLRHVLIMILMILTLSPYLVMAIAFGIQLVSCSVLMVLL*RPAFDL W+V+A LVQIFQLQLFLNNWRRM + +++*LHYFVSGTT*G** *HQNMKLVGNLGKVSG YVEFF Subject 3228 RLRHVLIMILMILTLSPYLVMAIAFGIQLVSCSVLMVLL*RPAFDLSWKVNAWLVQIFQLQLFLNNWRRMPMLKMK*LHYFVSGTT*G**W*HQNMKLVGNLGKVSGLYVEFF 3566
Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome
Sequence ID: JX559646.1 Length: 8726 Number of Matches: 7
Range 1: 3226 to 3564 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
271.9 bits(587) | 0.0 | 109/113(96%) | 0/113(0%) | Plus/Plus |
Query 2 QIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGFALKAGIRSFVESERLISSDLSAPTISKQLEENACAESEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGIL 340 QIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGFALKAGIRSFVESERL+SSDLSAPTISKQLEENA AE+EMIALFCIRHHVRLIV+TPEYEVSWKFGESEWPLCGIL Subject 3226 QIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGFALKAGIRSFVESERLVSSDLSAPTISKQLEENAYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGIL 3564
Range 2: 3226 to 3564 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
236.6 bits(510) | 0.0 | 100/113(88%) | 0/113(0%) | Minus/Minus |
Query 2 KNST*GPLTFPKFPTNFIFWCYYYQPYVVPDTK*CNHLTLGTSILLQLFRNSWS*KI*TNKALTLHKRSNAGLQSKTISTEQETN*MPKAIAITRYGESVKIINIIISTCLNL 340 +NST*GPL FPKFPTNFIFWCY+YQPYVVPDTK*CNH G SIL QLFRN WS*KI*TN+ALTLHKRSNAGLQSKTISTE ETN*MPKAIAITR+ ESVKIINIIISTCLNL Subject 3226 QNST*GPLAFPKFPTNFIFWCYHYQPYVVPDTK*CNHFIFGISILFQLFRNGWS*KI*TNQALTLHKRSNAGLQSKTISTE*ETN*MPKAIAITRHRESVKIINIIISTCLNL 3564
Range 3: 3261 to 3572 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
223.3 bits(484) | 0.0 | 95/104(91%) | 0/104(0%) | Minus/Minus |
Query 37 LEERIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQNNAIISLSAQAFSSNCLEIVGAERSELIRRSLSTKDRMPAFRAKPSVLSKKPTECQKQLPSPGTEKVLK 348 L RIPHRGHSLSPNFQLTSYSGV TISLTWCRIQN+AIIS SA AFSSNCLE+VGAERSEL RRSLSTKDRMPAF+AKPSVLSKKPTECQKQLPSPGTEKVLK Subject 3261 LRHRIPHRGHSLSPNFQLTSYSGVITISLTWCRIQNSAIISFSA*AFSSNCLEMVGAERSELTRRSLSTKDRMPAFKAKPSVLSKKPTECQKQLPSPGTEKVLK 3572
Range 4: 3227 to 3562 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
212.3 bits(457) | 0.0 | 100/112(89%) | 0/112(0%) | Minus/Minus |
Query 3 EFHIGATHFPQISNXXXXXXXXXXXLRGAGYKIMQSSHSRHKHSPPIV*K*LELKDLN**GAHSPQKIECRPSEQNHQY*ARNQLNAKSNCHHQVRRKC*NHQYHNQHMPQS 338 EFHIGAT FPQISN*LHILVL LSALRGAGYKI+QS H RHKHS PIV*K LELKDLN* GAHSPQKIECRPS+QNHQY* RNQLNAKSNCHHQ +RKC*NHQYHNQHMPQS Subject 3227 EFHIGATRFPQISN*LHILVLSLSALRGAGYKIVQSFHFRHKHSLPIV*KWLELKDLN*PGAHSPQKIECRPSKQNHQY*VRNQLNAKSNCHHQAQRKC*NHQYHNQHMPQS 3562
Range 5: 3225 to 3383 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
118.8 bits(253) | 0.0 | 49/53(92%) | 0/53(0%) | Plus/Plus |
Query 1 PD*GMC*L*Y**F*HFLRTW*WQLLLAFSWFLAQY*WFCSEGRHSIFCGE*AP 159 PD*GMC*L*Y**F*HFL W*WQLLLAFSWFL QY*WFC EGRHSIFCGE*AP Subject 3225 PD*GMC*L*Y**F*HFLCAW*WQLLLAFSWFLTQY*WFCFEGRHSIFCGE*AP 3383
Range 6: 3420 to 3563 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
102.3 bits(217) | 0.0 | 42/48(88%) | 0/48(0%) | Plus/Plus |
Query 196 TIGGECLCRE*DDCIILYPAPRKADSSNTRI*S*LEIWGK*VAPMWNS 339 TIG ECLCR+*+DC ILYPAPRKADS NTRI*S*LEIWGK VAPMWNS Subject 3420 TIGRECLCRK*NDCTILYPAPRKADSDNTRI*S*LEIWGKRVAPMWNS 3563
Range 7: 3227 to 3562 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
171.1 bits(367) | 0.0 | 101/112(90%) | 0/112(0%) | Plus/Plus |
Query 3 RLRHVLIMILMILTLSPYLVMAIAFGIQXXXXXXXXXXXXRPAFDLLWRVSAXXXXXXXXXXXXNNWRRMLVPRVR*LHYFVSGTT*G****HQNMKLVGNLGKVSGPYVEF 338 RLRHVLIMILMILTLS LVMAIAFGIQLVS SVLMVLL*RPAFDLLWRVSA LVQIFQLQ FLNNW+RML+P+++*LHYFVSGTT*G****HQNMKLVGNLGK SGPYVEF Subject 3227 RLRHVLIMILMILTLSLCLVMAIAFGIQLVSYSVLMVLL*RPAFDLLWRVSAWLVQIFQLQPFLNNWKRMLMPKMK*LHYFVSGTT*G****HQNMKLVGNLGKASGPYVEF 3562
Rupestris stem pitting associated virus strain SG1, complete genome
Sequence ID: AY881626.1 Length: 8742 Number of Matches: 7
Range 1: 3226 to 3564 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
269.6 bits(582) | 0.0 | 108/113(96%) | 0/113(0%) | Plus/Plus |
Query 2 QIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGFALKAGIRSFVESERLISSDLSAPTISKQLEENACAESEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGIL 340 QIEACADYDIDDFN FSVPGDGNCFWHSVGFLLSTDGFALKAGIRSFVESERL+SSDLSAPTISKQLEENA AE+EMIALFCIRHHVRLIV+TPEYEVSWKFGESEWPLCGIL Subject 3226 QIEACADYDIDDFNAFSVPGDGNCFWHSVGFLLSTDGFALKAGIRSFVESERLVSSDLSAPTISKQLEENAYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGIL 3564
Range 2: 3226 to 3564 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
238.9 bits(515) | 0.0 | 101/113(89%) | 0/113(0%) | Minus/Minus |
Query 2 KNST*GPLTFPKFPTNFIFWCYYYQPYVVPDTK*CNHLTLGTSILLQLFRNSWS*KI*TNKALTLHKRSNAGLQSKTISTEQETN*MPKAIAITRYGESVKIINIIISTCLNL 340 +NST*GPL FPKFPTNFIFWCYYYQPYVVPDTK*CNH G SIL QLFRN WS*KI*TN+ALTLHKRSNAGLQSKTISTE ETN*MPKAIAITR+ ESVKIINIIISTCLNL Subject 3226 QNST*GPLAFPKFPTNFIFWCYYYQPYVVPDTK*CNHFIFGISILFQLFRNGWS*KI*TNQALTLHKRSNAGLQSKTISTE*ETN*MPKAIAITRHRESVKIINIIISTCLNL 3564
Range 3: 3261 to 3572 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
221.5 bits(480) | 0.0 | 94/104(90%) | 0/104(0%) | Minus/Minus |
Query 37 LEERIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQNNAIISLSAQAFSSNCLEIVGAERSELIRRSLSTKDRMPAFRAKPSVLSKKPTECQKQLPSPGTEKVLK 348 L RIPHRGHSLSPNFQLTSYSGV TISLTWCRIQN+AIIS SA AFSSNCLE+VGAERSEL RRSLSTKDRMPAF+AKPSVLSKKPTECQKQLPSPGTEK LK Subject 3261 LRHRIPHRGHSLSPNFQLTSYSGVITISLTWCRIQNSAIISFSA*AFSSNCLEMVGAERSELTRRSLSTKDRMPAFKAKPSVLSKKPTECQKQLPSPGTEKALK 3572
Range 4: 3227 to 3562 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
206.8 bits(445) | 0.0 | 100/112(89%) | 0/112(0%) | Minus/Minus |
Query 3 EFHIGATHFPQISNXXXXXXXXXXXLRGAGYKIMQSSHSRHKHSPPIV*K*LELKDLN**GAHSPQKIECRPSEQNHQY*ARNQLNAKSNCHHQVRRKC*NHQYHNQHMPQS 338 EFHIGAT FPQISN*LHILVLLLSALRGAGYKI+QS H RHKHS PIV*K LELKDLN* GAHSPQKIECRPS+QNHQY* RNQLNAKSNCHHQ +RK *NHQYHNQHMPQS Subject 3227 EFHIGATRFPQISN*LHILVLLLSALRGAGYKIVQSFHFRHKHSLPIV*KWLELKDLN*PGAHSPQKIECRPSKQNHQY*VRNQLNAKSNCHHQAQRKR*NHQYHNQHMPQS 3562
Range 5: 3225 to 3383 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
115.2 bits(245) | 0.0 | 48/53(91%) | 0/53(0%) | Plus/Plus |
Query 1 PD*GMC*L*Y**F*HFLRTW*WQLLLAFSWFLAQY*WFCSEGRHSIFCGE*AP 159 PD*GMC*L*Y**F* FL W*WQLLLAFSWFL QY*WFC EGRHSIFCGE*AP Subject 3225 PD*GMC*L*Y**F*RFLCAW*WQLLLAFSWFLTQY*WFCFEGRHSIFCGE*AP 3383
Range 6: 3420 to 3563 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
102.8 bits(218) | 0.0 | 42/48(88%) | 0/48(0%) | Plus/Plus |
Query 196 TIGGECLCRE*DDCIILYPAPRKADSSNTRI*S*LEIWGK*VAPMWNS 339 TIG ECLCR+*+DC ILYPAPRKADS+NTRI*S*LEIWGK VAPMWNS Subject 3420 TIGRECLCRK*NDCTILYPAPRKADSNNTRI*S*LEIWGKRVAPMWNS 3563
Range 7: 3227 to 3562 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
171.1 bits(367) | 0.0 | 101/112(90%) | 0/112(0%) | Plus/Plus |
Query 3 RLRHVLIMILMILTLSPYLVMAIAFGIQXXXXXXXXXXXXRPAFDLLWRVSAXXXXXXXXXXXXNNWRRMLVPRVR*LHYFVSGTT*G****HQNMKLVGNLGKVSGPYVEF 338 RLRHVLIMILMILTLS LVMAIAFGIQLVS SVLMVLL*RPAFDLLWRVSA LVQIFQLQ FLNNW+RML+P+++*LHYFVSGTT*G****HQNMKLVGNLGK SGPYVEF Subject 3227 RLRHVLIMILMILTLSLCLVMAIAFGIQLVSYSVLMVLL*RPAFDLLWRVSAWLVQIFQLQPFLNNWKRMLMPKMK*LHYFVSGTT*G****HQNMKLVGNLGKASGPYVEF 3562