Queries
Nucleotide Sequence (648 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
435.0 | 1562.5 | 14% | 4.617e-120 | 49% | KC962564.1 | |
431.3 | 1641.6 | 19% | 5.859e-119 | 46% | DQ855084.2 | |
424.9 | 1453.1 | 25% | 4.999e-117 | 38% | X75433.2 | |
424.9 | 1453.1 | 25% | 4.999e-117 | 38% | NC_003604.2 | |
424.0 | 1220.6 | 23% | 9.436e-117 | 37% | AF007415.2 |
Alignments
Grapevine virus A isolate I327 5, complete genome
Sequence ID: KC962564.1 Length: 7349 Number of Matches: 15
Range 1: 4318 to 4899 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
435.0 bits(943) | 0.0 | 188/194(97%) | 0/194(0%) | Plus/Plus |
Query 25 AKAGQTIACFAHSVLCRFGPILRQTEKALRELLPENVMIYSQKNYMDLDKWAKTWVESMMGTDSDYEAFDRSQDEKVLDLEVEVLRFFLWPXXXXXXXXXXXXMMGCALGDLAVMRFSGEFGTFFFNTVCNMVFSCMRYHMDRNTPMCFAGDDMYSPGILRVKKDYEATLEQLTLEAKAHNSDEPLLCGWRMNP 606 AKAGQTIACFAHSVLCRFGPILRQTEKALRELLPENVMIYSQKNYMDLDKWAKTWVESMMGTDSDYEAFDRSQDEKVLDLEVEVLRFFLWPEELIKEYEELKLMMGCALGDLAVMRFSGEFGTFFFNTVCNMVFSCMRYHMDRNTPMCFAGDDMYSPGILRVKKDYEATLEQLTL+AK H S+EPL CGWRM+P Subject 4318 AKAGQTIACFAHSVLCRFGPILRQTEKALRELLPENVMIYSQKNYMDLDKWAKTWVESMMGTDSDYEAFDRSQDEKVLDLEVEVLRFFLWPEELIKEYEELKLMMGCALGDLAVMRFSGEFGTFFFNTVCNMVFSCMRYHMDRNTPMCFAGDDMYSPGILRVKKDYEATLEQLTLKAKVHVSEEPLFCGWRMSP 4899
Range 2: 4308 to 4535 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
137.6 bits(294) | 0.0 | 63/76(83%) | 0/76(0%) | Minus/Minus |
Query 15 CDLSKAS*SESVPIMLSTQVFAHLSRSI*FFCE*IITFSGRSSLNAFSVCRRMGPNRHKTE*AKHAMVCPAFAIHP 242 CDLSKAS*SESVPIMLST V AHLSRS+*FF E IITFSGRSSL+AFSVC RMGPN H+TE AKHAMV PAFA P Subject 4308 CDLSKAS*SESVPIMLSTHVLAHLSRSM*FF*EYIITFSGRSSLSAFSVCLRMGPNLHRTECAKHAMVWPAFASTP 4535
Range 3: 4632 to 4808 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
124.3 bits(265) | 0.0 | 52/59(88%) | 0/59(0%) | Minus/Minus |
Query 339 FFTLRIPGEYMSSPAKHIGVFRSMW*RIQLNTMLQTVLKKKVPNSPENLITAKSPKAHP 515 F TLR+PGEY+SSPAKHIGVFRSM *RIQLNT+LQTVLKKKVPNSPENLITA+SP AHP Subject 4632 FLTLRMPGEYISSPAKHIGVFRSM**RIQLNTILQTVLKKKVPNSPENLITARSPNAHP 4808
Range 4: 4529 to 4657 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
38.6 bits(78) | 0.0 | 21/43(49%) | 0/43(0%) | Minus/Minus |
Query 236 QLNHPKRTPSSALTPRIP*LAPRATERSAALLPPGPEPFHPVI 364 Q + P TPS PR P LAP ATERSA P FH I Subject 4529 QPDRPTHTPSLI*APRTPLLAPLATERSAGPPLPSLALFHLAI 4657
Range 5: 4805 to 4894 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
34.5 bits(69) | 0.0 | 16/30(53%) | 0/30(0%) | Minus/Minus |
Query 512 SFSIRREGVRQSYALWPRVSAVRGWPRSPS 601 S SI R GV Q+ A WP S V+ PR+PS Subject 4805 SSSIHRRGVPQTRAPWP*ASVVQE*PRNPS 4894
Range 6: 4572 to 4895 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
139.4 bits(298) | 0.0 | 64/108(59%) | 0/108(0%) | Plus/Plus |
Query 279 ALLSVARGANQGIRGVKADDGVRFG*FSCDEVLRRIRDLLLQHRLQHGVQLYALPHGPEHPDVLCGGRHVFTRNSKGKEGLRGHPRTADTRGQSA*L*RTPSLRMENE 602 ALLSVARGAN+G+RG + +DGV G CDE+LR IR LLLQH LQ+GV LYAL HGPEHP+VLC +V + + +EGLRG+ T D +GQ A +* TP L ME+E Subject 4572 ALLSVARGANKGVRGAQINDGVCVGRSGCDEILR*IRYLLLQHCLQYGV*LYALSHGPEHPNVLCWR*YVLPWHPESQEGLRGYS*TTDAQGQGARV*GTPLLWMEDE 4895
Range 7: 4298 to 4588 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
119.7 bits(255) | 0.0 | 53/97(55%) | 0/97(0%) | Plus/Plus |
Query 5 WVCLGESQRRGRPSHALLTRFYADSGPSYGRQKRH*GNFCQRM**STHRRIIWISISGQRPGWRA*WERTRITRPLIDHRMKRFWTWR*KCCASFCG 295 W G +QRR +PS AL R ADSGPS G+ +RH*GNFC R ** T RR W +G R GWRA*W + TRP D +MK+ TW+ + CASFCG Subject 4298 WRRGG*TQRRAKPSRALRIRSCADSGPS*GKPRRH*GNFCLRT**YTLRRTTWT*TNGPRHGWRA*WGQIPTTRPSTDRKMKKC*TWKWRSCASFCG 4588
Range 8: 4625 to 4888 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.5 bits(226) | 0.0 | 52/88(59%) | 0/88(0%) | Plus/Plus |
Query 332 **WGALWVI*L**GSQANSGPSSSTPFATWCSVVCATTWTGTPRCALRGTTCIHQEF*G*RRTTRPPSNS*HSRPKRITLTNPFSADG 595 **WG W I L** SQ NS PSSST FA WC VVCA TWTGTP+CAL C * RR TR N+* SRP+ L NP S DG Subject 4625 **WGVRWAIWL**DSQVNSVPSSSTLFAIWCLVVCAITWTGTPQCALLEMICTPLAS*ESRRITRLLLNN*RSRPRCTCLRNPSSVDG 4888
Range 9: 4317 to 4502 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
98.2 bits(208) | 0.0 | 38/62(61%) | 0/62(0%) | Plus/Plus |
Query 24 RKGGADHRMLCSLGFMPIRAHPTADRKGIKGTSARECDDLLTEELYGSR*VGKDLGGEHDGN 209 RKGG +HR+LC+ G + IRAHP A+R+G +GTSA E DD+L+EEL+G R +G+D+GGEHDG+ Subject 4317 RKGGPNHRVLCAFGPVQIRAHPEANREGTEGTSA*ERDDILSEELHGPRQMGQDMGGEHDGD 4502
Range 10: 4627 to 4893 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
94.5 bits(200) | 0.0 | 52/89(58%) | 0/89(0%) | Minus/Minus |
Query 334 HSPSAEKGFVRVMRFGLECQLFEGGLVVLLYP*NSW*IHVVPRKAHRGVPXXXXXXXXXXXXANGVEEEGPEFA*EPHHS*ITQSAPHH 600 H PS E+GF+R + GLE QLF+ LV+LL ++ +H++ KAH GVPVHV+AHTT+HH+AN VEEEG EF *E HHS I Q PHH Subject 4627 HPPSTEEGFLRHVHLGLERQLFKSSLVILLDSQDARGVHIISSKAHWGVPVHVIAHTTKHHIANSVEEEGTEFT*ESHHSQIAQRTPHH 4893
Range 11: 4298 to 4456 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
60.6 bits(126) | 0.0 | 28/53(53%) | 0/53(0%) | Minus/Minus |
Query 5 PYNSSVSRSSHSLAEVPLMPFLSAVGWARIGIKPSEQSMRWSAPPLRFTQTHP 163 P +SS S SS S AEVP +P A GWARI P+ QS RW PPLR + P Subject 4298 PCSSSESISSRSQAEVPSVPSRFASGWARICTGPNAQSTRWFGPPLRLPPSSP 4456
Range 12: 4480 to 4587 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.8 bits(109) | 0.0 | 21/36(58%) | 0/36(0%) | Minus/Minus |
Query 187 PQKEAQHFYLQVQNLFIL*SIKGLVIRVRSHHALHP 294 PQKEAQ + QV + FIL S++GLV+ + HHALHP Subject 4480 PQKEAQDLHFQV*HFFILRSVEGLVVGICPHHALHP 4587
Range 13: 4309 to 4416 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.8 bits(111) | 0.0 | 24/36(67%) | 0/36(0%) | Minus/Minus |
Query 16 QKFP*CLFCLP*DGPESA*NRVSKACDGLPRLCDSP 123 QKFP CL LP DGPESA +R+ KA DGL RLC P Subject 4309 QKFPQCLLGLPQDGPESAQDRMRKARDGLARLCVYP 4416
Grapevine virus A isolate GTG11 1, complete genome
Sequence ID: DQ855084.2 Length: 7351 Number of Matches: 14
Range 1: 4317 to 4898 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
431.3 bits(935) | 0.0 | 186/194(96%) | 0/194(0%) | Plus/Plus |
Query 25 AKAGQTIACFAHSVLCRFGPILRQTEKALRELLPENVMIYSQKNYMDLDKWAKTWVESMMGTDSDYEAFDRSQDEKVLDLEVEVLRFFLWPXXXXXXXXXXXXMMGCALGDLAVMRFSGEFGTFFFNTVCNMVFSCMRYHMDRNTPMCFAGDDMYSPGILRVKKDYEATLEQLTLEAKAHNSDEPLLCGWRMNP 606 AKAGQTIACFAHSVLCRFGPILRQTEKALRELLPENVMIYSQKNYMDLDKWAKTWVESMMGTDSDYEAFDRSQDEKVLDLEVEVLRFFLWPEELIKEYEELKLMMGCALGDLAVMRFSGEFGTFFFNTVCNMVFSCMRYHMDRNTP+CFAGDDMYSPGILRVKKDYE TLEQLTL+AK H S+EPL CGWRM+P Subject 4317 AKAGQTIACFAHSVLCRFGPILRQTEKALRELLPENVMIYSQKNYMDLDKWAKTWVESMMGTDSDYEAFDRSQDEKVLDLEVEVLRFFLWPEELIKEYEELKLMMGCALGDLAVMRFSGEFGTFFFNTVCNMVFSCMRYHMDRNTPICFAGDDMYSPGILRVKKDYETTLEQLTLKAKVHVSEEPLFCGWRMSP 4898
Range 2: 4307 to 4534 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
153.7 bits(329) | 0.0 | 67/76(88%) | 0/76(0%) | Minus/Minus |
Query 15 CDLSKAS*SESVPIMLSTQVFAHLSRSI*FFCE*IITFSGRSSLNAFSVCRRMGPNRHKTE*AKHAMVCPAFAIHP 242 CDLS AS*SESVPIMLSTQVFAHLSRS+*FFCE IITFSGRSSLNAFSVC +MGPN HKTE AKHAMVCPAFA P Subject 4307 CDLSNAS*SESVPIMLSTQVFAHLSRSM*FFCEYIITFSGRSSLNAFSVCLKMGPNLHKTECAKHAMVCPAFASTP 4534
Range 3: 4631 to 4807 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
130.3 bits(278) | 0.0 | 53/59(90%) | 0/59(0%) | Minus/Minus |
Query 339 FFTLRIPGEYMSSPAKHIGVFRSMW*RIQLNTMLQTVLKKKVPNSPENLITAKSPKAHP 515 FFT RIPGEYMSSPAKH+GVF SMW*RIQLNTML TVLKKKVPNSPENL+TA+SPKAHP Subject 4631 FFTRRIPGEYMSSPAKHMGVFLSMW*RIQLNTMLHTVLKKKVPNSPENLMTARSPKAHP 4807
Range 4: 4531 to 4650 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.5 bits(106) | 0.0 | 23/40(57%) | 0/40(0%) | Minus/Minus |
Query 239 NHPKRTPSSALTPRIP*LAPRATERSAALLPPGPEPFHPV 358 +HPK TPSSA P IP LAP AT R+A L PP PV Subject 4531 DHPKHTPSSASAPHIPLLAPLATRRNAGLQPPDLTLSRPV 4650
Range 5: 4868 to 4897 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
24.4 bits(47) | 0.0 | 8/10(80%) | 0/10(0%) | Minus/Minus |
Query 576 GFILHPQRRG 605 G ILHPQ+RG Subject 4868 GLILHPQKRG 4897
Range 6: 4565 to 4897 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
160.1 bits(343) | 0.0 | 71/111(64%) | 0/111(0%) | Plus/Plus |
Query 273 SAALLSVARGANQGIRGVKADDGVRFG*FSCDEVLRRIRDLLLQHRLQHGVQLYALPHGPEHPDVLCGGRHVFTRNSKGKEGLRGHPRTADTRGQSA*L*RTPSLRMENEP 605 S A L VARGAN+GI G +ADDGV FG* EV +RDLLL HR+QHGVQLYALPHG +HP +LCGG HVF R G+EGLR HPRTAD + QSA + LRME+EP Subject 4565 SPAFLLVARGANKGI*GAEADDGVCFG*SGSHEVFGGVRDLLL*HRVQHGVQLYALPHGQKHPHMLCGG*HVFARYPAGEEGLRDHPRTADAQSQSARVRGASFLRMEDEP 4897
Range 7: 4315 to 4587 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
108.7 bits(231) | 0.0 | 46/91(51%) | 0/91(0%) | Plus/Plus |
Query 23 SQRRGRPSHALLTRFYADSGPSYGRQKRH*GNFCQRM**STHRRIIWISISGQRPGWRA*WERTRITRPLIDHRMKRFWTWR*KCCASFCG 295 +QR GRP HA + AD GPS RQ++H*G+FCQ+M** RR WIS +G++PGWRA*W +T + HR ++ WR K C S CG Subject 4315 TQRPGRP*HASRIQSCADLGPS*DRQRKH*GSFCQKM**YIRRRTTWISTNGRKPGWRA*WGQTPTMKHSTGHRTRKC*IWRLKSCVSSCG 4587
Range 8: 4624 to 4902 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.1 bits(282) | 0.0 | 62/93(67%) | 0/93(0%) | Plus/Plus |
Query 332 **WGALWVI*L**GSQANSGPSSSTPFATWCSVVCATTWTGTPRCALRGTTCIHQEF*G*RRTTRPPSNS*HSRPKRITLTNPFSADGE*TLS 610 **WG LWVI *G + +SGPSS TP ATWCSVVC TTWT TP ALRG TCI Q G*RRTTRPPSNS* S+PK + FSADG * S Subject 4624 **WGVLWVIWQS*GFRGSSGPSSLTPCATWCSVVCVTTWTETPPYALRGMTCIRQVSCG*RRTTRPPSNS*RSKPKCTCPRSLFSADGG*ARS 4902
Range 9: 4316 to 4501 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
87.7 bits(185) | 0.0 | 35/62(56%) | 0/62(0%) | Plus/Plus |
Query 24 RKGGADHRMLCSLGFMPIRAHPTADRKGIKGTSARECDDLLTEELYGSR*VGKDLGGEHDGN 209 RKG ADH ML + + I AH DR+ I+G SAR+CDD+ EEL+GSR +G++LGGEHDG+ Subject 4316 RKGRADHSMLRAFSLVQIWAHLKTDRESIEGASARKCDDIFAEELHGSRQMGENLGGEHDGD 4501
Range 10: 4623 to 4901 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
113.3 bits(241) | 0.0 | 61/93(66%) | 0/93(0%) | Minus/Minus |
Query 331 DRVHSPSAEKGFVRVMRFGLECQLFEGGLVVLLYP*NSW*IHVVPRKAHRGVPXXXXXXXXXXXXANGVEEEGPEFA*EPHHS*ITQSAPHHQ 609 +R H PSAEK + + FG E QLFEGGLVVLL+P ++W IHV+PRKA+ GV VHVV HTTEHHVA+GV+EEGPE +PH ITQS PHHQ Subject 4623 ERAHPPSAEKRLLGHVHFGFERQLFEGGLVVLLHPQDTWRIHVIPRKAYGGVSVHVVTHTTEHHVAHGVKEEGPELPRKPHDCQITQSTPHHQ 4901
Range 11: 4294 to 4461 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
57.9 bits(120) | 0.0 | 27/56(48%) | 0/56(0%) | Minus/Minus |
Query 2 RDPYNSSVSRSSHSLAEVPLMPFLSAVGWARIGIKPSEQSMRWSAPPLRFTQTHPT 169 RDP +SS + SSH LAE P M LS + WA+I + + +SM WSA PLR P+ Subject 4294 RDPCSSSANISSHFLAEAPSMLSLSVLRWAQICTRLNARSMLWSARPLRLHPFSPS 4461
Range 12: 4476 to 4586 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
45.1 bits(92) | 0.0 | 17/37(46%) | 0/37(0%) | Minus/Minus |
Query 184 PQKEAQHFYLQVQNLFIL*SIKGLVIRVRSHHALHPG 294 PQ+E Q F LQ+ + +L* ++ ++ V HHALHPG Subject 4476 PQEETQDFNLQI*HFLVL*PVECFIVGVCPHHALHPG 4586
Range 13: 4711 to 4896 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
94.1 bits(199) | 0.0 | 39/62(63%) | 0/62(0%) | Minus/Minus |
Query 419 GSFSIRREGVRQSYALWPRVSAVRGWPRSPSLPLEFLVNTCRPPQSTSGCSGPCGSAYN*TP 604 GS SIRR+ ++ ALW SAVRGW RSPS P +L NTC PPQS GC PCG+AYN*TP Subject 4711 GSSSIRRKEAPRTRALWL*ASAVRGWSRSPSSPAGYLANTCHPPQSIWGCFCPCGNAYN*TP 4896
Grapevine virus A genomic RNA, MP and CP genes
Sequence ID: X75433.2 Length: 7351 Number of Matches: 13
Range 1: 4317 to 4898 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
424.9 bits(921) | 0.0 | 181/194(93%) | 0/194(0%) | Plus/Plus |
Query 25 AKAGQTIACFAHSVLCRFGPILRQTEKALRELLPENVMIYSQKNYMDLDKWAKTWVESMMGTDSDYEAFDRSQDEKVLDLEVEVLRFFLWPXXXXXXXXXXXXMMGCALGDLAVMRFSGEFGTFFFNTVCNMVFSCMRYHMDRNTPMCFAGDDMYSPGILRVKKDYEATLEQLTLEAKAHNSDEPLLCGWRMNP 606 AKAGQTIACFAHSVLCRFGPILRQTEKALRELLPE +MIYSQK YMDLDKWAKTWVESMMGTDSDYEAFDRSQDEKVLDLEVEVLRFFLWPE+LI+EYEELKLMMGCALGDLAVMRFSGEFGTFFFNTVCNMVFSCMRYH+DRNTPMCFAGDDMYSPGILRVKKDYEATL+QLTL+AK H S+EPL CGWRM+P Subject 4317 AKAGQTIACFAHSVLCRFGPILRQTEKALRELLPEKLMIYSQKKYMDLDKWAKTWVESMMGTDSDYEAFDRSQDEKVLDLEVEVLRFFLWPEDLIREYEELKLMMGCALGDLAVMRFSGEFGTFFFNTVCNMVFSCMRYHIDRNTPMCFAGDDMYSPGILRVKKDYEATLDQLTLKAKVHISEEPLFCGWRMSP 4898
Range 2: 4631 to 4807 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
130.3 bits(278) | 0.0 | 53/59(90%) | 0/59(0%) | Minus/Minus |
Query 339 FFTLRIPGEYMSSPAKHIGVFRSMW*RIQLNTMLQTVLKKKVPNSPENLITAKSPKAHP 515 FFTLR+PGEY+SSPAKHIGVF SMW*RIQLNTML TVLKKKVPNSPENLITA+SP AHP Subject 4631 FFTLRMPGEYISSPAKHIGVFLSMW*RIQLNTMLHTVLKKKVPNSPENLITARSPNAHP 4807
Range 3: 4307 to 4534 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.0 bits(262) | 0.0 | 57/76(75%) | 0/76(0%) | Minus/Minus |
Query 15 CDLSKAS*SESVPIMLSTQVFAHLSRSI*FFCE*IITFSGRSSLNAFSVCRRMGPNRHKTE*AKHAMVCPAFAIHP 242 CDLS AS*SESVPIMLST V AHLS+S+ FF E I++FSGRSS +AFSV RRMGPN H TE*AK AMVCPA A P Subject 4307 CDLSNAS*SESVPIMLSTHVLAHLSKSMYFF*EYIMSFSGRSSRSAFSV*RRMGPNLHSTE*AKQAMVCPALASTP 4534
Range 4: 4549 to 4632 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
36.3 bits(73) | 0.0 | 18/28(64%) | 0/28(0%) | Minus/Minus |
Query 257 PSSALTPRIP*LAPRATERSAALLPPGP 340 PSSA PR P*L RA ERSA PP P Subject 4549 PSSA*APRTP*LNLRAIERSARPPPPSP 4632
Range 5: 4868 to 4897 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
24.4 bits(47) | 0.0 | 8/10(80%) | 0/10(0%) | Minus/Minus |
Query 576 GFILHPQRRG 605 G ILHPQ+RG Subject 4868 GLILHPQKRG 4897
Range 6: 4658 to 4897 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
118.8 bits(253) | 0.0 | 52/80(65%) | 0/80(0%) | Plus/Plus |
Query 366 DEVLRRIRDLLLQHRLQHGVQLYALPHGPEHPDVLCGGRHVFTRNSKGKEGLRGHPRTADTRGQSA*L*RTPSLRMENEP 605 DEVLR IR LLLQHR+QHGV LYALPH E+PDVLCGG +VF R+S+ +EGLR H R DT QS +* TP L +E+EP Subject 4658 DEVLRGIRHLLLQHRVQHGV*LYALPHRQEYPDVLCGG*YVFARHSESEEGLRSHSRPVDT*SQSPYI*GTPLLWVEDEP 4897
Range 7: 4297 to 4590 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.0 bits(190) | 0.0 | 43/98(44%) | 0/98(0%) | Plus/Plus |
Query 5 WVCLGESQRRGRPSHALLTRFYADSGPSYGRQKRH*GNFCQRM**STHRRIIWISISGQRPGWRA*WERTRITRPLIDHRMKRFWTWR*KCCASFCGP 298 W G RR +PS L R DSGP + ++ G+ C R * T R+ W I+G R G RA*W RT TR DH+ ++ WTWR + CASF GP Subject 4297 WKRGGWMLRRDKPSPVSLIRCCVDSGPFCVKLRKRYGSSCPRSS*YTLRKSTWTWINGLRRG*RA*WGRTPTTRHSTDHKTRKCWTWRWRSCASFYGP 4590
Range 8: 4657 to 4887 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
114.7 bits(244) | 0.0 | 52/77(68%) | 0/77(0%) | Plus/Plus |
Query 365 **GSQANSGPSSSTPFATWCSVVCATTWTGTPRCALRGTTCIHQEF*G*RRTTRPPSNS*HSRPKRITLTNPFSADG 595 **GS NS PSSSTP ATWC VVC TT TG PRCALRG CI Q F* *RR T+P S S*H +PK I L NP S G Subject 4657 **GSPGNSAPSSSTPCATWCLVVCVTT*TGIPRCALRGMICIRQAF*E*RRITKPLSTS*HLKPKSIYLRNPSSVGG 4887
Range 9: 4322 to 4636 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.0 bits(190) | 0.0 | 51/105(49%) | 0/105(0%) | Plus/Plus |
Query 30 GGADHRMLCSLGFMPIRAHPTADRKGIKGTSARECDDLLTEELYGSR*VGKDLGGEHDGNXXXXXXXXXITXXXXXXXXXRSAALLSVARGANQGIRGVKADDGV 344 GG +HR+ S G + IRAH ++ + G ARE D+L+E+++G *+G D+G EHDG+GL LRG+ IT + +G GG ALLS+AR NQG+RG ADDG+ Subject 4322 GGTNHRLFRSFGAV*IRAHSASN*ESATGAPAREAHDILSEKVHGLG*MG*DVGREHDGDGLRLRGIRQITRRESAGLGGGGLALLSMARRFNQGVRGA*ADDGM 4636
Range 10: 4479 to 4892 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
156.9 bits(336) | 0.0 | 82/138(59%) | 0/138(0%) | Minus/Minus |
Query 187 HSPSAEKGFVRVMRFGLECQLFEGGLVVLLYP*NSW*IHVVPRKAHRGVPXXXXXXXXXXXXANGVEEEGPEFA*EPHHS*ITQSAPHHQXXXXXXXXXXLGPQKEAQHFYLQVQNLFIL*SIKGLVIRVRSHHALHP 600 H P E+GF+R M FG +CQL E G V+LL+ N+W IH++PRKAHRG+PV+VV HTT+HHVA+GVEEEG EF EPHH + HHQL LLV D*+ GP KEAQ +LQVQ+ +L*S++ LV+ VR HHAL+P Subject 4479 HPPPTEEGFLRYMDFGFKCQLVESGFVILLHSQNAWRIHIIPRKAHRGIPVYVVTHTTKHHVAHGVEEEGAEFPGEPHHRQVA*CTSHHQLKLLVLPD*IFGP*KEAQDLHLQVQHFLVL*SVECLVVGVRPHHALYP 4892
Range 11: 4321 to 4464 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
34.1 bits(68) | 0.0 | 18/48(38%) | 0/48(0%) | Minus/Minus |
Query 29 YRDPYNSSVSRSSHSLAEVPLMPFLSAVGWARIGIKPSEQSMRWSAPP 172 Y P S S S S A P+ WARI P+E++ RW PP Subject 4321 YPSPCTFSESIS*ASRAGAPVALSQFDAEWARIYTAPNERNRRWFVPP 4464
Range 12: 4711 to 4896 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.0 bits(164) | 0.0 | 37/62(60%) | 0/62(0%) | Minus/Minus |
Query 419 GSFSIRREGVRQSYALWPRVSAVRGWPRSPSLPLEFLVNTCRPPQSTSGCSGPCGSAYN*TP 604 GS S R GV Q Y LW VS R W R+PS E L NT PPQSTSG S CG+AYN*TP Subject 4711 GSSSTHRRGVPQIYGLWL*VSTGREWLRNPSSLSECLANTYHPPQSTSGYSCLCGNAYN*TP 4896
Grapevine virus A, complete genome
Sequence ID: NC_003604.2 Length: 7351 Number of Matches: 13
Range 1: 4317 to 4898 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
424.9 bits(921) | 0.0 | 181/194(93%) | 0/194(0%) | Plus/Plus |
Query 25 AKAGQTIACFAHSVLCRFGPILRQTEKALRELLPENVMIYSQKNYMDLDKWAKTWVESMMGTDSDYEAFDRSQDEKVLDLEVEVLRFFLWPXXXXXXXXXXXXMMGCALGDLAVMRFSGEFGTFFFNTVCNMVFSCMRYHMDRNTPMCFAGDDMYSPGILRVKKDYEATLEQLTLEAKAHNSDEPLLCGWRMNP 606 AKAGQTIACFAHSVLCRFGPILRQTEKALRELLPE +MIYSQK YMDLDKWAKTWVESMMGTDSDYEAFDRSQDEKVLDLEVEVLRFFLWPE+LI+EYEELKLMMGCALGDLAVMRFSGEFGTFFFNTVCNMVFSCMRYH+DRNTPMCFAGDDMYSPGILRVKKDYEATL+QLTL+AK H S+EPL CGWRM+P Subject 4317 AKAGQTIACFAHSVLCRFGPILRQTEKALRELLPEKLMIYSQKKYMDLDKWAKTWVESMMGTDSDYEAFDRSQDEKVLDLEVEVLRFFLWPEDLIREYEELKLMMGCALGDLAVMRFSGEFGTFFFNTVCNMVFSCMRYHIDRNTPMCFAGDDMYSPGILRVKKDYEATLDQLTLKAKVHISEEPLFCGWRMSP 4898
Range 2: 4631 to 4807 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
130.3 bits(278) | 0.0 | 53/59(90%) | 0/59(0%) | Minus/Minus |
Query 339 FFTLRIPGEYMSSPAKHIGVFRSMW*RIQLNTMLQTVLKKKVPNSPENLITAKSPKAHP 515 FFTLR+PGEY+SSPAKHIGVF SMW*RIQLNTML TVLKKKVPNSPENLITA+SP AHP Subject 4631 FFTLRMPGEYISSPAKHIGVFLSMW*RIQLNTMLHTVLKKKVPNSPENLITARSPNAHP 4807
Range 3: 4307 to 4534 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.0 bits(262) | 0.0 | 57/76(75%) | 0/76(0%) | Minus/Minus |
Query 15 CDLSKAS*SESVPIMLSTQVFAHLSRSI*FFCE*IITFSGRSSLNAFSVCRRMGPNRHKTE*AKHAMVCPAFAIHP 242 CDLS AS*SESVPIMLST V AHLS+S+ FF E I++FSGRSS +AFSV RRMGPN H TE*AK AMVCPA A P Subject 4307 CDLSNAS*SESVPIMLSTHVLAHLSKSMYFF*EYIMSFSGRSSRSAFSV*RRMGPNLHSTE*AKQAMVCPALASTP 4534
Range 4: 4549 to 4632 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
36.3 bits(73) | 0.0 | 18/28(64%) | 0/28(0%) | Minus/Minus |
Query 257 PSSALTPRIP*LAPRATERSAALLPPGP 340 PSSA PR P*L RA ERSA PP P Subject 4549 PSSA*APRTP*LNLRAIERSARPPPPSP 4632
Range 5: 4868 to 4897 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
24.4 bits(47) | 0.0 | 8/10(80%) | 0/10(0%) | Minus/Minus |
Query 576 GFILHPQRRG 605 G ILHPQ+RG Subject 4868 GLILHPQKRG 4897
Range 6: 4658 to 4897 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
118.8 bits(253) | 0.0 | 52/80(65%) | 0/80(0%) | Plus/Plus |
Query 366 DEVLRRIRDLLLQHRLQHGVQLYALPHGPEHPDVLCGGRHVFTRNSKGKEGLRGHPRTADTRGQSA*L*RTPSLRMENEP 605 DEVLR IR LLLQHR+QHGV LYALPH E+PDVLCGG +VF R+S+ +EGLR H R DT QS +* TP L +E+EP Subject 4658 DEVLRGIRHLLLQHRVQHGV*LYALPHRQEYPDVLCGG*YVFARHSESEEGLRSHSRPVDT*SQSPYI*GTPLLWVEDEP 4897
Range 7: 4297 to 4590 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.0 bits(190) | 0.0 | 43/98(44%) | 0/98(0%) | Plus/Plus |
Query 5 WVCLGESQRRGRPSHALLTRFYADSGPSYGRQKRH*GNFCQRM**STHRRIIWISISGQRPGWRA*WERTRITRPLIDHRMKRFWTWR*KCCASFCGP 298 W G RR +PS L R DSGP + ++ G+ C R * T R+ W I+G R G RA*W RT TR DH+ ++ WTWR + CASF GP Subject 4297 WKRGGWMLRRDKPSPVSLIRCCVDSGPFCVKLRKRYGSSCPRSS*YTLRKSTWTWINGLRRG*RA*WGRTPTTRHSTDHKTRKCWTWRWRSCASFYGP 4590
Range 8: 4657 to 4887 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
114.7 bits(244) | 0.0 | 52/77(68%) | 0/77(0%) | Plus/Plus |
Query 365 **GSQANSGPSSSTPFATWCSVVCATTWTGTPRCALRGTTCIHQEF*G*RRTTRPPSNS*HSRPKRITLTNPFSADG 595 **GS NS PSSSTP ATWC VVC TT TG PRCALRG CI Q F* *RR T+P S S*H +PK I L NP S G Subject 4657 **GSPGNSAPSSSTPCATWCLVVCVTT*TGIPRCALRGMICIRQAF*E*RRITKPLSTS*HLKPKSIYLRNPSSVGG 4887
Range 9: 4322 to 4636 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.0 bits(190) | 0.0 | 51/105(49%) | 0/105(0%) | Plus/Plus |
Query 30 GGADHRMLCSLGFMPIRAHPTADRKGIKGTSARECDDLLTEELYGSR*VGKDLGGEHDGNXXXXXXXXXITXXXXXXXXXRSAALLSVARGANQGIRGVKADDGV 344 GG +HR+ S G + IRAH ++ + G ARE D+L+E+++G *+G D+G EHDG+GL LRG+ IT + +G GG ALLS+AR NQG+RG ADDG+ Subject 4322 GGTNHRLFRSFGAV*IRAHSASN*ESATGAPAREAHDILSEKVHGLG*MG*DVGREHDGDGLRLRGIRQITRRESAGLGGGGLALLSMARRFNQGVRGA*ADDGM 4636
Range 10: 4479 to 4892 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
156.9 bits(336) | 0.0 | 82/138(59%) | 0/138(0%) | Minus/Minus |
Query 187 HSPSAEKGFVRVMRFGLECQLFEGGLVVLLYP*NSW*IHVVPRKAHRGVPXXXXXXXXXXXXANGVEEEGPEFA*EPHHS*ITQSAPHHQXXXXXXXXXXLGPQKEAQHFYLQVQNLFIL*SIKGLVIRVRSHHALHP 600 H P E+GF+R M FG +CQL E G V+LL+ N+W IH++PRKAHRG+PV+VV HTT+HHVA+GVEEEG EF EPHH + HHQL LLV D*+ GP KEAQ +LQVQ+ +L*S++ LV+ VR HHAL+P Subject 4479 HPPPTEEGFLRYMDFGFKCQLVESGFVILLHSQNAWRIHIIPRKAHRGIPVYVVTHTTKHHVAHGVEEEGAEFPGEPHHRQVA*CTSHHQLKLLVLPD*IFGP*KEAQDLHLQVQHFLVL*SVECLVVGVRPHHALYP 4892
Range 11: 4321 to 4464 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
34.1 bits(68) | 0.0 | 18/48(38%) | 0/48(0%) | Minus/Minus |
Query 29 YRDPYNSSVSRSSHSLAEVPLMPFLSAVGWARIGIKPSEQSMRWSAPP 172 Y P S S S S A P+ WARI P+E++ RW PP Subject 4321 YPSPCTFSESIS*ASRAGAPVALSQFDAEWARIYTAPNERNRRWFVPP 4464
Range 12: 4711 to 4896 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.0 bits(164) | 0.0 | 37/62(60%) | 0/62(0%) | Minus/Minus |
Query 419 GSFSIRREGVRQSYALWPRVSAVRGWPRSPSLPLEFLVNTCRPPQSTSGCSGPCGSAYN*TP 604 GS S R GV Q Y LW VS R W R+PS E L NT PPQSTSG S CG+AYN*TP Subject 4711 GSSSTHRRGVPQIYGLWL*VSTGREWLRNPSSLSECLANTYHPPQSTSGYSCLCGNAYN*TP 4896
Grapevine virus A isolate PA3, complete genome
Sequence ID: AF007415.2 Length: 7351 Number of Matches: 12
Range 1: 4317 to 4898 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
424.0 bits(919) | 0.0 | 179/194(92%) | 0/194(0%) | Plus/Plus |
Query 25 AKAGQTIACFAHSVLCRFGPILRQTEKALRELLPENVMIYSQKNYMDLDKWAKTWVESMMGTDSDYEAFDRSQDEKVLDLEVEVLRFFLWPXXXXXXXXXXXXMMGCALGDLAVMRFSGEFGTFFFNTVCNMVFSCMRYHMDRNTPMCFAGDDMYSPGILRVKKDYEATLEQLTLEAKAHNSDEPLLCGWRMNP 606 AKAGQTIACFAHSVLCRFGPILRQTE+ALRELLPENVMIYSQKNYMDLDKWAKTWVESMMGTDSDYEAFDRSQDEKVLDLEVEVLRFFLWPE+LI+EYEELKLMMGCALGDLAVMRFSGEFGTFFFNT+CNMVFSCMRYHMDRNTP+CFAGDDMYSPGILR K DYE TL+QLTL+AK H S+EPL CGWRM+P Subject 4317 AKAGQTIACFAHSVLCRFGPILRQTERALRELLPENVMIYSQKNYMDLDKWAKTWVESMMGTDSDYEAFDRSQDEKVLDLEVEVLRFFLWPEDLIREYEELKLMMGCALGDLAVMRFSGEFGTFFFNTICNMVFSCMRYHMDRNTPICFAGDDMYSPGILRTKNDYEGTLDQLTLKAKVHISEEPLFCGWRMSP 4898
Range 2: 4307 to 4531 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.9 bits(240) | 0.0 | 55/75(73%) | 0/75(0%) | Minus/Minus |
Query 15 DLSKAS*SESVPIMLSTQVFAHLSRSI*FFCE*IITFSGRSSLNAFSVCRRMGPNRHKTE*AKHAMVCPAFAIHP 239 D SKAS*SESVPIMLSTQV AHLSRS+*FF E IITFSG +SL+A SVC +GPN TE AK AMV PAFA P Subject 4307 DRSKAS*SESVPIMLSTQVLAHLSRSM*FF*EYIITFSGNNSLSALSVCLSIGPNLQSTEWAKQAMV*PAFASTP 4531
Range 3: 4631 to 4807 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.4 bits(239) | 0.0 | 47/59(80%) | 0/59(0%) | Minus/Minus |
Query 339 FFTLRIPGEYMSSPAKHIGVFRSMW*RIQLNTMLQTVLKKKVPNSPENLITAKSPKAHP 515 FF LRIPGEYMSSPAKHIGV RS+ *R+QLNTML VLKK VPNSPEN +TA+SP AHP Subject 4631 FFVLRIPGEYMSSPAKHIGVLRSI**RMQLNTMLHMVLKKNVPNSPENRMTARSPSAHP 4807
Range 4: 4558 to 4656 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
46.0 bits(94) | 0.0 | 21/33(64%) | 0/33(0%) | Minus/Minus |
Query 266 QLNHPKRTPSSALTPRIP*LAPRATERSAALLP 364 +L+HP RTPSS PR P*L P A RS ALLP Subject 4558 RLDHPVRTPSSV*APRTP*LNPPAIGRSEALLP 4656
Range 5: 4562 to 4897 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
119.7 bits(255) | 0.0 | 56/112(50%) | 0/112(0%) | Plus/Plus |
Query 270 RSAALLSVARGANQGIRGVKADDGVRFG*FSCDEVLRRIRDLLLQHRLQHGVQLYALPHGPEHPDVLCGGRHVFTRNSKGKEGLRGHPRTADTRGQSA*L*RTPSLRMENEP 605 RSA+LL +A G NQG+RG DDGVR G* S V R+RD+LLQH +QHG+ L+AL +G +HP++ G HVFT + + KE L G R D+ +SA +*R L +E+EP Subject 4562 RSASLLPMAGGFNQGVRGA*TDDGVRTG*SSRHAVFGRVRDILLQHHMQHGI*LHALSYGSQHPNMFRWG*HVFTWDPEDKE*L*GDSRPTDSESESAYI*RAIVLWLEDEP 4897
Range 6: 4297 to 4587 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
80.8 bits(170) | 0.0 | 46/97(47%) | 0/97(0%) | Plus/Plus |
Query 5 WVCLGESQRRGRPSHALLTRFYADSGPSYGRQKRH*GNFCQRM**STHRRIIWISISGQRPGWRA*WERTRITRPLIDHRMKRFWTWR*KCCASFCG 295 W +QRR +P A T + DS RQK H GN +RM** T RR W +G RPG RA*W R I RPLID +M++ R*KC AS G Subject 4297 WRNAAWTQRRVKP*PASPTPCFVDSALYSDRQKGHSGNCYRRM**YTLRRTTWTWTNGPRPGSRA*WGRIPIMRPLIDLKMRKC*I*R*KCFASSYG 4587
Range 7: 4476 to 4586 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.3 bits(110) | 0.0 | 22/37(59%) | 0/37(0%) | Minus/Minus |
Query 184 PQKEAQHFYLQVQNLFIL*SIKGLVIRVRSHHALHPG 294 P +EA+HFYL + + IL SIKGL+I +R HHAL PG Subject 4476 P*EEAKHFYL*I*HFLILRSIKGLIIGIRPHHALDPG 4586
Range 8: 4623 to 4700 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
46.4 bits(95) | 0.0 | 19/26(73%) | 0/26(0%) | Minus/Minus |
Query 331 GVEEEGPEFA*EPHHS*ITQSAPHHQ 408 GVEEE PE A +PH *ITQ APHHQ Subject 4623 GVEEECPELARKPHDG*ITQCAPHHQ 4700
Range 9: 4746 to 4892 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
41.4 bits(84) | 0.0 | 18/49(37%) | 0/49(0%) | Minus/Minus |
Query 454 HSPSAEKGFVRVMRFGLECQLFEGGLVVLLYP*NSW*IHVVPRKAHRGV 600 H P+ E+ R M F + QL L+++L P + *IHV+P + + GV Subject 4746 HPPTTEQWLFRYMHFRFQSQLV*SPLIIILCPQDPR*IHVIPSETYWGV 4892
Range 10: 4297 to 4455 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
37.7 bits(76) | 0.0 | 22/53(42%) | 0/53(0%) | Minus/Minus |
Query 5 PYNSSVSRSSHSLAEVPLMPFLSAVGWARIGIKPSEQSMRWSAPPLRFTQTHP 163 P +SS S S HS +P +PFLS RI S +S W PPLR + P Subject 4297 PCSSSESISLHSPVTIP*VPFLSV*V*GRIYKARSGRSRLWFDPPLRPRRVSP 4455
Range 11: 4316 to 4501 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
73.0 bits(153) | 0.0 | 30/62(48%) | 0/62(0%) | Plus/Plus |
Query 24 RKGGADHRMLCSLGFMPIRAHPTADRKGIKGTSARECDDLLTEELYGSR*VGKDLGGEHDGN 209 RKGG++H +L L + IR + DRKG +G EC+D+L+EEL+G +G+DLG EHDG+ Subject 4316 RKGGSNHSLLRPLRAL*IRPYTQTDRKGTQGIVTGECNDILSEELHGPGQMGQDLGREHDGD 4501
Range 12: 4624 to 4818 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
73.0 bits(153) | 0.0 | 35/65(54%) | 0/65(0%) | Plus/Plus |
Query 332 **WGALWVI*L**GSQANSGPSSSTPFATWCSVVCATTWTGTPRCALRGTTCIHQEF*G*RRTTR 526 **WGA WVI* G +A+SG SSSTP+ATW CA W TP+ G TCIH *G R R Subject 4624 **WGAHWVI*PSCGFRASSGHSSSTPYATWYLAACAIIWIATPQYVSLGMTCIHLGS*GQRMIMR 4818
Nucleotide Sequence (352 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
205.4 | 713.9 | 36% | 2.34e-51 | 48% | X75433.2 | |
205.4 | 713.9 | 36% | 2.34e-51 | 48% | NC_003604.2 | |
202.2 | 682.3 | 36% | 2.161e-50 | 46% | KC962564.1 | |
180.7 | 393.7 | 44% | 6.571e-44 | 40% | KX828703.1 | |
194.4 | 634.1 | 32% | 4.782e-48 | 44% | DQ855084.2 |
Alignments
Grapevine virus A genomic RNA, MP and CP genes
Sequence ID: X75433.2 Length: 7351 Number of Matches: 6
Range 1: 2007 to 2330 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
205.4 bits(442) | 0.0 | 86/108(80%) | 0/108(0%) | Minus/Plus |
Query 29 GLDDSYDHCLIQRYSAGGSIGFHADDEPCYLPGGSVVTVNLYGDATFEVKENTSGRIEKVELRDGDVYVMGPGMQQTHKHRVTSHTVCRPKHTQHILARSEERRVGKE 352 GLDDSYDHCLIQRY+AGGSIGFHADDEPCYLPGGSVVTVNL+GDATFEVKEN SG+IEK EL DGDVYVMGPGMQQTHKHRVTSHT R T E R G E Subject 2007 GLDDSYDHCLIQRYTAGGSIGFHADDEPCYLPGGSVVTVNLHGDATFEVKENQSGKIEKKELHDGDVYVMGPGMQQTHKHRVTSHTDGRCSITLRNKTVDYEARKGDE 2330
Range 2: 2009 to 2227 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
143.1 bits(306) | 0.0 | 63/73(86%) | 0/73(0%) | Plus/Minus |
Query 132 IPGPITYTSPSRSSTFSILPDVFSLTSNVASPYKFTVTTEPPGR*QGSSSAWNPILPPAEYLWIRQ*S*LSSR 350 IPGPITYTSPS SS FSI PD FS TS VASP K TVTTEPPGR* GSSSAWNPILPPA YLWIRQ*S*LSSR Subject 2009 IPGPITYTSPSCSSFFSIFPD*FSFTSKVASPCKLTVTTEPPGR*HGSSSAWNPILPPAVYLWIRQ*S*LSSR 2227
Range 3: 2010 to 2285 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
102.3 bits(217) | 0.0 | 48/92(52%) | 0/92(0%) | Plus/Minus |
Query 74 GVFGAANGVRSHSVLVSLLHPGSHHVHVPITQFYFLYPPGCILLDFKRGIPVQVHGHYRTPR*ITGLIICMESYTSAC*VPLDQTMIITII* 349 G AA VR +SVLVSLLH +HHVH+P+ L PG IL K + V + GH TP *+ IIC+ESYT+ C V LDQTMI+ II* Subject 2010 GDAAAAIRVRGNSVLVSLLHSWTHHVHIPVV*LLLLDLPGLILFHLKSSVAV*IDGHDGTPW*VAWFIICVESYTAPCRVSLDQTMIVAII* 2285
Range 4: 2012 to 2290 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
100.5 bits(213) | 0.0 | 52/93(56%) | 0/93(0%) | Minus/Plus |
Query 69 R**L*SLSDPKVLSRRKYRIPCR**ALLSTWGFCSDRELVRGCHV*SQGEYIREDRESRTA*WGRVRDGTRDAANSQAQSDFSHRLPPQTHPT 347 R**L SLSDPK+ R +YRIP R** +L T GF DR+ R + * + E IREDRE G VRDG+R+A NSQAQS SH P Q HP+ Subject 2012 R**LRSLSDPKIHGRGQYRIPRR**TMLPTRGFRRDRQFTRRRYF*GERESIREDREEGATRRGCVRDGSRNATNSQAQSYLSHGWPLQHHPS 2290
Range 5: 2011 to 2271 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.4 bits(191) | 0.0 | 44/87(51%) | 0/87(0%) | Plus/Minus |
Query 88 GKRCEKSLCACEFAASRVPSRTRPHHAVLLSLSSRMYSP*LQTWHPRTSSRSLQNPQVDNRAHHLHGILYFRLLSTFGSDNDHNYHL 348 G CE+ LCACEF A PSRT P S SSR+ S Q R + RS +NP V + HHL GILY L FGSDND +YHL Subject 2011 GHPCER*LCACEFVAFLDPSRTHPRRVAPSSRSSRIDSLSPQK*RRRVN*RSRRNPLVGSMVHHLRGILYCPLPCIFGSDNDRSYHL 2271
Range 6: 2038 to 2286 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
72.1 bits(151) | 0.0 | 40/83(48%) | 0/83(0%) | Minus/Plus |
Query 73 SKGTQQAEV*DSMQMMSPVIYLGVL**P*TCTGMPRLKSRRIHPGG*RK*NCVMGTCT*WDPGCSKLTSTE*LLTPFAAPNTP 321 SK T+Q V*DS QMM+ Y GV *P T L+ +RI+PG R+ + G CT*W C+KLTSTE LT AA +P Subject 2038 SKDTRQGAV*DSTQMMNHATYQGVPS*PSIYTATLLLR*KRINPGRSRRRSYTTGMCT*WVQECNKLTSTELPLTRMAAAASP 2286
Grapevine virus A, complete genome
Sequence ID: NC_003604.2 Length: 7351 Number of Matches: 6
Range 1: 2007 to 2330 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
205.4 bits(442) | 0.0 | 86/108(80%) | 0/108(0%) | Minus/Plus |
Query 29 GLDDSYDHCLIQRYSAGGSIGFHADDEPCYLPGGSVVTVNLYGDATFEVKENTSGRIEKVELRDGDVYVMGPGMQQTHKHRVTSHTVCRPKHTQHILARSEERRVGKE 352 GLDDSYDHCLIQRY+AGGSIGFHADDEPCYLPGGSVVTVNL+GDATFEVKEN SG+IEK EL DGDVYVMGPGMQQTHKHRVTSHT R T E R G E Subject 2007 GLDDSYDHCLIQRYTAGGSIGFHADDEPCYLPGGSVVTVNLHGDATFEVKENQSGKIEKKELHDGDVYVMGPGMQQTHKHRVTSHTDGRCSITLRNKTVDYEARKGDE 2330
Range 2: 2009 to 2227 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
143.1 bits(306) | 0.0 | 63/73(86%) | 0/73(0%) | Plus/Minus |
Query 132 IPGPITYTSPSRSSTFSILPDVFSLTSNVASPYKFTVTTEPPGR*QGSSSAWNPILPPAEYLWIRQ*S*LSSR 350 IPGPITYTSPS SS FSI PD FS TS VASP K TVTTEPPGR* GSSSAWNPILPPA YLWIRQ*S*LSSR Subject 2009 IPGPITYTSPSCSSFFSIFPD*FSFTSKVASPCKLTVTTEPPGR*HGSSSAWNPILPPAVYLWIRQ*S*LSSR 2227
Range 3: 2010 to 2285 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
102.3 bits(217) | 0.0 | 48/92(52%) | 0/92(0%) | Plus/Minus |
Query 74 GVFGAANGVRSHSVLVSLLHPGSHHVHVPITQFYFLYPPGCILLDFKRGIPVQVHGHYRTPR*ITGLIICMESYTSAC*VPLDQTMIITII* 349 G AA VR +SVLVSLLH +HHVH+P+ L PG IL K + V + GH TP *+ IIC+ESYT+ C V LDQTMI+ II* Subject 2010 GDAAAAIRVRGNSVLVSLLHSWTHHVHIPVV*LLLLDLPGLILFHLKSSVAV*IDGHDGTPW*VAWFIICVESYTAPCRVSLDQTMIVAII* 2285
Range 4: 2012 to 2290 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
100.5 bits(213) | 0.0 | 52/93(56%) | 0/93(0%) | Minus/Plus |
Query 69 R**L*SLSDPKVLSRRKYRIPCR**ALLSTWGFCSDRELVRGCHV*SQGEYIREDRESRTA*WGRVRDGTRDAANSQAQSDFSHRLPPQTHPT 347 R**L SLSDPK+ R +YRIP R** +L T GF DR+ R + * + E IREDRE G VRDG+R+A NSQAQS SH P Q HP+ Subject 2012 R**LRSLSDPKIHGRGQYRIPRR**TMLPTRGFRRDRQFTRRRYF*GERESIREDREEGATRRGCVRDGSRNATNSQAQSYLSHGWPLQHHPS 2290
Range 5: 2011 to 2271 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.4 bits(191) | 0.0 | 44/87(51%) | 0/87(0%) | Plus/Minus |
Query 88 GKRCEKSLCACEFAASRVPSRTRPHHAVLLSLSSRMYSP*LQTWHPRTSSRSLQNPQVDNRAHHLHGILYFRLLSTFGSDNDHNYHL 348 G CE+ LCACEF A PSRT P S SSR+ S Q R + RS +NP V + HHL GILY L FGSDND +YHL Subject 2011 GHPCER*LCACEFVAFLDPSRTHPRRVAPSSRSSRIDSLSPQK*RRRVN*RSRRNPLVGSMVHHLRGILYCPLPCIFGSDNDRSYHL 2271
Range 6: 2038 to 2286 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
72.1 bits(151) | 0.0 | 40/83(48%) | 0/83(0%) | Minus/Plus |
Query 73 SKGTQQAEV*DSMQMMSPVIYLGVL**P*TCTGMPRLKSRRIHPGG*RK*NCVMGTCT*WDPGCSKLTSTE*LLTPFAAPNTP 321 SK T+Q V*DS QMM+ Y GV *P T L+ +RI+PG R+ + G CT*W C+KLTSTE LT AA +P Subject 2038 SKDTRQGAV*DSTQMMNHATYQGVPS*PSIYTATLLLR*KRINPGRSRRRSYTTGMCT*WVQECNKLTSTELPLTRMAAAASP 2286
Grapevine virus A isolate I327 5, complete genome
Sequence ID: KC962564.1 Length: 7349 Number of Matches: 6
Range 1: 2008 to 2331 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
202.2 bits(435) | 0.0 | 85/108(79%) | 0/108(0%) | Minus/Plus |
Query 29 GLDDSYDHCLIQRYSAGGSIGFHADDEPCYLPGGSVVTVNLYGDATFEVKENTSGRIEKVELRDGDVYVMGPGMQQTHKHRVTSHTVCRPKHTQHILARSEERRVGKE 352 GLDDSYDHCLIQRY+AGGSIGFHADDEPCYLPGGSVVTVNL GDATFEV+EN SGRIEK EL DGDVYVMGPGMQQTH+HRVTSHT R T E R G E Subject 2008 GLDDSYDHCLIQRYTAGGSIGFHADDEPCYLPGGSVVTVNLLGDATFEVRENQSGRIEKKELHDGDVYVMGPGMQQTHEHRVTSHTDGRCSITLRNKTIDYESRKGDE 2331
Range 2: 2010 to 2228 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
136.2 bits(291) | 0.0 | 61/73(84%) | 0/73(0%) | Plus/Minus |
Query 132 IPGPITYTSPSRSSTFSILPDVFSLTSNVASPYKFTVTTEPPGR*QGSSSAWNPILPPAEYLWIRQ*S*LSSR 350 IPGPITYTSPS SS FSI PD FSLTS VASP +FTVTTEPPGR* GSSSA NP+LPPA YLWIRQ*S*LSS+ Subject 2010 IPGPITYTSPSCSSFFSIRPDWFSLTSKVASPSRFTVTTEPPGR*HGSSSA*NPMLPPAVYLWIRQ*S*LSSK 2228
Range 3: 2013 to 2288 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
94.1 bits(199) | 0.0 | 47/92(51%) | 0/92(0%) | Minus/Plus |
Query 72 R**L*SLSDPKVLSRRKYRIPCR**ALLSTWGFCSDRELVRGCHV*SQGEYIREDRESRTA*WGRVRDGTRDAANSQAQSDFSHRLPPQTHP 347 R**L*SL +P+V R K+ I CR +LSTW DRE GCH * QGE + + E WGRV DG RDAAN +AQ H P Q HP Subject 2013 R**L*SLPNPEVHGRGKHWISCRRRTMLSTWRLRRDRESAWGCHF*GQGEPVGPN*EEGATRWGRVCDGARDAANPRAQGHLPH*WPLQHHP 2288
Range 4: 2011 to 2286 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
92.3 bits(195) | 0.0 | 45/92(49%) | 0/92(0%) | Plus/Minus |
Query 74 GVFGAANGVRSHSVLVSLLHPGSHHVHVPITQFYFLYPPGCILLDFKRGIPVQVHGHYRTPR*ITGLIICMESYTSAC*VPLDQTMIITII* 349 G AA V VLV LLHPG HH+HVPI L +L D K GIP Q+HGH R*I ++CM+S S VPLD +II II* Subject 2011 GDAAAAISVGGDPVLVGLLHPGPHHIHVPIV*LLLLNSARLVLPDLKSGIPKQIHGHDGASR*IAWFVVCMKSNASPGRVPLD*AVIIAII* 2286
Range 5: 2012 to 2272 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
84.5 bits(178) | 0.0 | 40/87(46%) | 0/87(0%) | Plus/Minus |
Query 88 GKRCEKSLCACEFAASRVPSRTRPHHAVLLSLSSRMYSP*LQTWHPRTSSRSLQNPQVDNRAHHLHGILYFRLLSTFGSDNDHNYHL 348 G +C + CA FAASR PS TRPH S SP* Q WHP+ SRS ++ QVD+ LH I F T G +DH+YHL Subject 2012 GHQCGR*PCARGFAASRAPSHTRPHRVAPSSQFGPTGSP*PQKWHPQADSRSRRSLQVDSMVRRLHEIQCFPRPCTSGLGSDHSYHL 2272
Range 6: 2039 to 2290 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
73.0 bits(153) | 0.0 | 39/84(46%) | 0/84(0%) | Minus/Plus |
Query 70 SKGTQQAEV*DSMQMMSPVIYLGVL**P*TCTGMPRLKSRRIHPGG*RK*NCVMGTCT*WDPGCSKLTSTE*LLTPFAAPNTPN 321 S+GT+ E D MQ + IYL *P* C GMP L+S R R+ + MGTC *W PGCSK TST T AA +P+ Subject 2039 SRGTRPGEALDFMQTTNHAIYLEAPS*P*ICLGMPLLRSGRTSRAELRRRSYTMGTCM*WGPGCSKPTSTGSPPTLMAAAASPS 2290
Grapevine virus A isolate TRAJ2 BR replicase protein, putative 19 kDa protein, movement protein, coat protein, and RNA binding protein genes, complete cds
Sequence ID: KX828703.1 Length: 7161 Number of Matches: 4
Range 1: 1823 to 2146 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
180.7 bits(388) | 0.0 | 77/108(71%) | 0/108(0%) | Minus/Plus |
Query 29 GLDDSYDHCLIQRYSAGGSIGFHADDEPCYLPGGSVVTVNLYGDATFEVKENTSGRIEKVELRDGDVYVMGPGMQQTHKHRVTSHTVCRPKHTQHILARSEERRVGKE 352 GLDDSYDHCLIQRY+AGGSIGFHADDEPCYLPGGSVVTVNLYGDA SG+ EK+EL DGDVYVMG GMQQTHKHRV SHT R T E R G E Subject 1823 GLDDSYDHCLIQRYAAGGSIGFHADDEPCYLPGGSVVTVNLYGDAXXXXXXXQSGKTEKIELHDGDVYVMGAGMQQTHKHRVFSHTDGRCSITLRNKTIDYETRGGDE 2146
Range 2: 1825 to 2043 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
118.4 bits(252) | 0.0 | 54/73(74%) | 0/73(0%) | Plus/Minus |
Query 132 IPGPITYTSPSRSSTFSILPDVFSLTSNVASPYKFTVTTEPPGR*QGSSSAWNPILPPAEYLWIRQ*S*LSSR 350 IP PITYTSPS SS FS+ PD ASPYK TVTTEPPGR*QGSSSA NP+LPPA YL I+Q*S*LSSR Subject 1825 IPAPITYTSPSCSSIFSVFPDXXXXXXXXASPYKLTVTTEPPGR*QGSSSA*NPMLPPAAYL*IKQ*S*LSSR 2043
Grapevine virus A isolate GTG11 1, complete genome
Sequence ID: DQ855084.2 Length: 7351 Number of Matches: 6
Range 1: 2007 to 2264 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.4 bits(418) | 0.0 | 77/86(90%) | 0/86(0%) | Minus/Plus |
Query 95 GLDDSYDHCLIQRYSAGGSIGFHADDEPCYLPGGSVVTVNLYGDATFEVKENTSGRIEKVELRDGDVYVMGPGMQQTHKHRVTSHT 352 GLDDSYDHCLIQRY+AGGSIGFHADDEPCYLPGGSVVTVNL+GDATFEVKEN S +IEK EL DGDVYVMGP QQTHKHRVTSHT Subject 2007 GLDDSYDHCLIQRYTAGGSIGFHADDEPCYLPGGSVVTVNLFGDATFEVKENKSEKIEKKELHDGDVYVMGPRKQQTHKHRVTSHT 2264
Range 2: 2009 to 2221 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
130.3 bits(278) | 0.0 | 59/71(83%) | 0/71(0%) | Plus/Minus |
Query 138 GPITYTSPSRSSTFSILPDVFSLTSNVASPYKFTVTTEPPGR*QGSSSAWNPILPPAEYLWIRQ*S*LSSR 350 GPITYTSPS SS FSI D+FSLTS VASP + TVTTEPPGR*QGSSSAWNPILPPA YL IRQ S*LSSR Subject 2009 GPITYTSPSCSSFFSIFSDLFSLTSKVASPNRLTVTTEPPGR*QGSSSAWNPILPPAVYL*IRQWS*LSSR 2221
Range 3: 2021 to 2290 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
92.7 bits(196) | 0.0 | 44/90(49%) | 0/90(0%) | Minus/Plus |
Query 69 L*SLSDPKVLSRRKYRIPCR**ALLSTWGFCSDRELVRGCHV*SQGEYIREDRESRTA*WGRVRDGTRDAANSQAQSDFSHRLPPQTHPT 338 L* L D +V SRR+YR+P LLST G R+ + GC++ SQGE +R+DRE *W RVRDGT++ AN QAQ H Q HP+ Subject 2021 L*PLPDSEVHSRREYRVPRGRRTLLSTRGLSRHRQSIWGCYLRSQGE*VRKDREEGAT*WRRVRDGTKETANPQAQGHLPH*RSLQHHPS 2290
Range 4: 2014 to 2268 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
82.6 bits(174) | 0.0 | 39/85(46%) | 0/85(0%) | Plus/Minus |
Query 91 KRCEKSLCACEFAASRVPSRTRPHHAVLLSLSSRMYSP*LQTWHPRTSSRSLQNPQVDNRAHHLHGILYFRLLSTFGSDNDHNYH 345 ++C + CAC FA S VPSRTR HH S S R YSP*L+ HP+ R +P+VD++ G LY RLL T S + H+ H Subject 2014 RQCGR*PCACGFAVSLVPSRTRLHHVAPSSRSFRTYSP*LRR*HPQID*R*RLSPRVDSKVRRPRGTLYSRLLCTSESGSGHSCH 2268
Range 5: 2013 to 2285 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
75.3 bits(158) | 0.0 | 40/91(44%) | 0/91(0%) | Plus/Minus |
Query 74 GVFGAANGVRSHSVLVSLLHPGSHHVHVPITQFYFLYPPGCILLDFKRGIPVQVHGHYRTPR*ITGLIICMESYTSAC*VPLDQTMIITII 346 G A V VLV LL P SHHVHV I L G ILLDF+ IP + G P *I ++ +E YT AC VPL+Q ++I +I Subject 2013 GDAAATVSVGGDPVLVGLLFPWSHHVHVSIM*LLLLDLFGLILLDFEGSIPK*IDGDD*APG*IARFVVRVEPYTPACCVPLNQAVVIAVI 2285
Range 6: 2041 to 2247 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
58.8 bits(122) | 0.0 | 34/69(49%) | 0/69(0%) | Minus/Plus |
Query 112 KGTQQAEV*DSMQMMSPVIYLGVL**P*TCTGMPRLKSRRIHPGG*RK*NCVMGTCT*WDPGCSKLTST 318 +GTQQA V* S + + IY G P GM KSRRI P R+ + +M TCT*WD G SK TST Subject 2041 RGTQQAGV*GSTRTTNLAIYPGAQSSPSIYLGMLPSKSRRISPKRSRRRSYMMETCT*WDQGNSKPTST 2247
Nucleotide Sequence (439 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
282.4 | 1120.2 | 24% | 2.198e-74 | 54% | KC962564.1 | |
282.4 | 1068.7 | 48% | 2.222e-74 | 57% | DQ855084.2 | |
282.0 | 1103.7 | 25% | 3.006e-74 | 54% | KX828703.1 | |
281.1 | 1000.1 | 47% | 5.684e-74 | 47% | X75433.2 | |
281.1 | 1000.1 | 47% | 5.684e-74 | 47% | NC_003604.2 |
Alignments
Grapevine virus A isolate I327 5, complete genome
Sequence ID: KC962564.1 Length: 7349 Number of Matches: 8
Range 1: 3523 to 3960 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
282.4 bits(619) | 0.0 | 136/146(93%) | 0/146(0%) | Minus/Plus |
Query 2 GIHVTPVLKKHLITNAKSTLLKKVLKGETYRRSEIVAMVRKHIPETTVLFEESRLAETVDYEARLAGDPYLKSLLALYXXXXXXXXXXXEPVALEPTRTHLALSTKINELAPFDLKAKEDREQYTEAGRTEQIDEEGYQGEAGNPM 439 GIHVTP LKK+LI NAKSTLLKKVLKGETYRRSEIVAMVRKHIP+TTVLFEESRLAETVDYEARLAGDPYLKSLLALYDEIEME+VEIEEPVALEPT+THLALST NELAPFDLKAKE REQYTE GRTEQIDEEGYQGEAGNPM Subject 3523 GIHVTPALKKNLINNAKSTLLKKVLKGETYRRSEIVAMVRKHIPDTTVLFEESRLAETVDYEARLAGDPYLKSLLALYDEIEMEEVEIEEPVALEPTKTHLALSTMTNELAPFDLKAKEYREQYTEVGRTEQIDEEGYQGEAGNPM 3960
Range 2: 3523 to 3960 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
197.2 bits(424) | 0.0 | 85/146(58%) | 0/146(0%) | Plus/Minus |
Query 2 HGVTCFALIPLFIYLLCPPRLGVLLPVLFCLKIEGRQLINLGAQSQMSSCGFECHRLFYFHVLHLDFIIKSQKRFEIRITG*SCLVVHCLGQPTLFEQHSGLWYVLSNHCHYF*SPVRLPLEHFLQQCALCVGNQMLFQYRSHMYP 439 H VTCFALIPLFIYL P VLL V C +IEG QLI A SQ+S GFECHR FY +LHLD +I+SQ+ FE+ I * CLV+HC GQ L E + G+ Y+LSNH HY S V L E+FLQQC L V +Q+L Q R HMYP Subject 3523 HRVTCFALIPLFIYLFSPAHFCVLLTVFLCFEIEGCQLIGHCA*SQVSLSGFECHRFFYLDLLHLDLVIQSQQGFEVGIAS*PCLVIHCFGQSALLE*YRGVRYMLSNHSHYLGSSVCLAFEYFLQQCTLRVIDQVLLQRRGHMYP 3960
Range 3: 3524 to 3955 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
181.1 bits(389) | 0.0 | 82/144(57%) | 0/144(0%) | Minus/Plus |
Query 7 GYM*LLY*KSI*LPTQRAHC*RKCSRGRRTGDQK*WQWFESTYQRPLCCSKRVGWPRQWTTRQD*PVILISNLFWLFMMKSRWRTWK*KSRWHSNPHELIWL*APRLMSWRPSILRQKRTGSNTPRRGGQSK*MKRGIKAKQVT 438 GYM* *+ * T+R HC*RK S+ R T D +*W WFES Y P S+R WP+QW TRQ * I SN WL M +SRWR +*K+RWHSNP L WL*A MSW PSI +Q+ T SNT + G ++*MKRGIKAKQVT Subject 3524 GYM*PRR*RRT*SITRRVHC*RKYSKARHTEDPR*WLWFESIYLTPRYYSRRADWPKQWITRQG*LAIPTSNPCWLCMTRSRWRRSR*KNRWHSNPLRLTWL*AQ*PMSWHPSISKQRNTVSNTQKWAGLNR*MKRGIKAKQVT 3955
Range 4: 3524 to 3955 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
163.7 bits(351) | 0.0 | 83/144(58%) | 0/144(0%) | Plus/Minus |
Query 7 GYLLRLDTPLHLFALSAPPRCIAPCPLLP*DRRAPTH*SWCSEPNEFVWVRVPPALLFPRPPSRFHHKEPEEI*DKDHRLVLPRSPLSRPAYSLRTAQWSLVCAFEPLPLFLISCTSPP*ALSSAVCSLRW*SDAFSVQESHVS 438 GYLLRLDTPLHL S P CIA L *DRR P H S C EP+E WVRVPP LL PPSR H EP I* +D +L LPR+PL RP S R W V AFEP PL I C S * LSSAV S R+*S + S SHVS Subject 3524 GYLLRLDTPLHLSVQSGPLLCIAHGIPLL*DRRVPAHWSLCLEPSES*WVRVPPVLLSRPPPSRSRHTEPTGI*GRDRQLALPRNPLFRPICSPRIVPWCQVYAFEP*PLSRIFCMSRL*VLSSAVYSSRY*SGSSSAPGSHVS 3955
Range 5: 3810 to 3959 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
95.5 bits(202) | 0.0 | 42/50(84%) | 0/50(0%) | Plus/Minus |
Query 3 MGLPASP*YPSSSICSVRPASVYCSLSSFALRSKGANSLILVLRAK*VRV 152 +GLPASP*YPSSSICSVRP SVYCS SFALRSKGA+SL++VLRAK*V V Subject 3810 IGLPASP*YPSSSICSVRPTSVYCSRYSFALRSKGASSLVIVLRAK*VLV 3959
Range 6: 3525 to 3653 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
92.7 bits(196) | 0.0 | 39/43(91%) | 0/43(0%) | Plus/Minus |
Query 309 GMCFRTIATISDLLYVSPLSTFFSSVLFALVIRCFFSTGVTCI 437 G+CFRTIATISDLLYVSPLSTFFSSVLFAL+IR FFS GVTCI Subject 3525 GICFRTIATISDLLYVSPLSTFFSSVLFALLIRFFFSAGVTCI 3653
Range 7: 3525 to 3713 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
81.3 bits(171) | 0.0 | 36/63(57%) | 0/63(0%) | Minus/Plus |
Query 249 DTCDSCTEKASDYQRKEHTAEESAQGGDVQEIRNSGNGSKAHTRDHCAVRRE*AGRDSGLRGK 437 DTCD E+ D R+E+TAEES Q D+Q+IR+SG GSKA+T H +R E GR+SGLRGK Subject 3525 DTCDPGAEEEPDQ*REEYTAEESTQRRDIQKIRDSGYGSKAYT*HHGTIRGEQIGRNSGLRGK 3713
Grapevine virus A isolate GTG11 1, complete genome
Sequence ID: DQ855084.2 Length: 7351 Number of Matches: 7
Range 1: 3522 to 3959 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
282.4 bits(619) | 0.0 | 136/146(93%) | 0/146(0%) | Minus/Plus |
Query 2 GIHVTPVLKKHLITNAKSTLLKKVLKGETYRRSEIVAMVRKHIPETTVLFEESRLAETVDYEARLAGDPYLKSLLALYXXXXXXXXXXXEPVALEPTRTHLALSTKINELAPFDLKAKEDREQYTEAGRTEQIDEEGYQGEAGNPM 439 GIHVTP LKKHLITNAKSTLLKKVLKGETYRRSEIV+MVRKHIP+TTVLFEESRLAETVDYEARLAGDPYLKSLLALYDEIEMEDVEIEEPVALEPT+THLALS K NELAPFDLKAKE REQYT+AGRTEQIDEEGYQGE G+PM Subject 3522 GIHVTPALKKHLITNAKSTLLKKVLKGETYRRSEIVSMVRKHIPDTTVLFEESRLAETVDYEARLAGDPYLKSLLALYDEIEMEDVEIEEPVALEPTKTHLALSAKNNELAPFDLKAKEYREQYTDAGRTEQIDEEGYQGETGDPM 3959
Range 2: 3522 to 3959 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
198.6 bits(427) | 0.0 | 88/146(60%) | 0/146(0%) | Plus/Minus |
Query 2 HGVTCFALIPLFIYLLCPPRLGVLLPVLFCLKIEGRQLINLGAQSQMSSCGFECHRLFYFHVLHLDFIIKSQKRFEIRITG*SCLVVHCLGQPTLFEQHSGLWYVLSNHCHYF*SPVRLPLEHFLQQCALCVGNQMLFQYRSHMYP 439 HGV CFALIP IYLL P +GVLLPVLF L+IE +LI L AQ M CGFE LF F++LH D +I+ + FEIRITG SCL+VHCL F+ HSG+WYVL +H + F*S V L LEHFLQQCALC+ +QML Q S +YP Subject 3522 HGVACFALIPFLIYLLSSPGIGVLLPVLFRLEIERCELIVLCAQG*MGLCGFERDWLFDFYILHFDLVIQG*EGFEIRITGQSCLIVHCLC*SAFFK*HSGIWYVLPDH*YDF*SSVSLTLEHFLQQCALCICDQMLLQCWSDVYP 3959
Range 3: 3523 to 3960 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
163.3 bits(350) | 0.0 | 84/146(58%) | 0/146(0%) | Minus/Plus |
Query 1 GYM*LLY*KSI*LPTQRAHC*RKCSRGRRTGDQK*WQWFESTYQRPLCCSKRVGWPRQWTTRQD*PVILISNLFWLFMMKSRWRTWK*KSRWHSNPHELIWL*APRLMSWRPSILRQKRTGSNTPRRGGQSK*MKRGIKAKQVTP* 438 GY L +*+SI* QRAHC*RKCSR R T DQK +QW STYQ PLC K+ RQWT RQD PVI ISN M +S+WR K KS+ SNP I *A R MS SI R+K TGSNTP G S+*M++GI+AKQ TP* Subject 3523 GYTSLQH*RSI*SQMQRAHC*RKCSRVRLTEDQKSYQWSGSTYQIPLCYLKKAD*QRQWTMRQDWPVIRISNPS*PCMTRSKWRM*KSKSQSRSNPQRPI*P*AQRTMSSHLSISRRKSTGSNTPMPGELSR*MRKGIRAKQATP* 3960
Range 4: 3524 to 3652 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
91.3 bits(193) | 0.0 | 39/43(91%) | 0/43(0%) | Plus/Minus |
Query 309 GMCFRTIATISDLLYVSPLSTFFSSVLFALVIRCFFSTGVTCI 437 GMCFRTI TISDLL VSPLSTFFSSVLFA VIRCFFS GVTCI Subject 3524 GMCFRTIDTISDLL*VSPLSTFFSSVLFAFVIRCFFSAGVTCI 3652
Range 5: 3809 to 3958 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
87.7 bits(185) | 0.0 | 40/50(80%) | 0/50(0%) | Plus/Minus |
Query 3 MGLPASP*YPSSSICSVRPASVYCSLSSFALRSKGANSLILVLRAK*VRV 152 MG P SP*YPSSSICSVRPASVYCS SFALRSKGA+SL LRAK V V Subject 3809 MGSPVSP*YPSSSICSVRPASVYCSRYSFALRSKGASSLFFALRAKWVFV 3958
Range 6: 3523 to 3960 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
150.9 bits(323) | 0.0 | 83/146(57%) | 0/146(0%) | Plus/Minus |
Query 1 SWGYLLRLDTPLHLFALSAPPRCIAPCPLLP*DRRAPTH*SWCSEPNEFVWVRVPPALLFPRPPSRFHHKEPEEI*DKDHRLVLPRSPLSRPAYSLRTAQWSLVCAFEPLPLFLISCTSPP*ALSSAVCSLRW*SDAFSVQESHVS 438 SWG L R DT HL A A RCIAP L P*DR+ H S S N +WVR AL F PP R H I*D DHR VLP SPLS L+ AQW LVCA PL FLI C S P*ALSSAVCSL *SDA SV E VS Subject 3523 SWGRLFRPDTLPHLSAQFARHRCIAPGTLSP*DRKVRAHCSLRSGLNGSLWVRARLALRFLHPPFRSRHTRLGGI*DTDHRPVLPHSPLSLLVCFLQIAQWYLVCASGPLIRFLIFCKSHP*ALSSAVCSLHL*SDASSVLE*RVS 3960
Range 7: 3524 to 3715 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
94.5 bits(200) | 0.0 | 42/64(66%) | 0/64(0%) | Minus/Plus |
Query 246 DTCDSCTEKASDYQRKEHTAEESAQGGDVQEIRNSGNGSKAHTRDHCAVRRE*AGRDSGLRGKT 437 DT S TE+ASD++ KEHTAEESAQG D+Q+IRN NG +AHTR HCA+ R+ RDSGL GKT Subject 3524 DTRHSSTEEASDHKCKEHTAEESAQG*DLQKIRNRINGPEAHTRYHCAI*RKQTSRDSGL*GKT 3715
Grapevine virus A isolate TRAJ2 BR replicase protein, putative 19 kDa protein, movement protein, coat protein, and RNA binding protein genes, complete cds
Sequence ID: KX828703.1 Length: 7161 Number of Matches: 8
Range 1: 3338 to 3775 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
282.0 bits(618) | 0.0 | 135/146(92%) | 0/146(0%) | Minus/Plus |
Query 2 GIHVTPVLKKHLITNAKSTLLKKVLKGETYRRSEIVAMVRKHIPETTVLFEESRLAETVDYEARLAGDPYLKSLLALYXXXXXXXXXXXEPVALEPTRTHLALSTKINELAPFDLKAKEDREQYTEAGRTEQIDEEGYQGEAGNPM 439 GIHVTP LKKHLITNAKSTLLKKVLKGETYRRSEIVAMVRKHIP+TTVLFEESRLAETVDYEARLAGDPYLKSLLALYDEIEMEDVE+EEPVALEPT+THLALSTK+NE APFDLKAKE REQ TEAGRTEQID+EGY GEAG+PM Subject 3338 GIHVTPALKKHLITNAKSTLLKKVLKGETYRRSEIVAMVRKHIPDTTVLFEESRLAETVDYEARLAGDPYLKSLLALYDEIEMEDVEVEEPVALEPTKTHLALSTKMNEFAPFDLKAKEYREQQTEAGRTEQIDDEGYSGEAGDPM 3775
Range 2: 3338 to 3775 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
203.6 bits(438) | 0.0 | 86/146(59%) | 0/146(0%) | Plus/Minus |
Query 2 HGVTCFALIPLFIYLLCPPRLGVLLPVLFCLKIEGRQLINLGAQSQMSSCGFECHRLFYFHVLHLDFIIKSQKRFEIRITG*SCLVVHCLGQPTLFEQHSGLWYVLSNHCHYF*SPVRLPLEHFLQQCALCVGNQMLFQYRSHMYP 439 H V+C A IP I LLC P LG+LLPV FC +IEG +LI+LGAQSQM GF+ +R F F+VLHL FII+S +RFEI I G SCL+VH Q TL + H G+ YVLSNHCH S V E+FLQQC LC+G+Q+L Q R +MYP Subject 3338 HRVSCLATIPFIIDLLCSPCLGLLLPVFFCFEIEGCELIHLGAQSQMGFRGFQSYRFFDFYVLHLYFIIQS*ERFEIGIAGQSCLIVHRFSQSTLLK*HGGVRYVLSNHCHNLRSSVSFTFEYFLQQCTLCIGDQVLLQCRGYMYP 3775
Range 3: 3339 to 3770 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
177.9 bits(382) | 0.0 | 83/144(58%) | 0/144(0%) | Minus/Plus |
Query 7 GYM*LLY*KSI*LPTQRAHC*RKCSRGRRTGDQK*WQWFESTYQRPLCCSKRVGWPRQWTTRQD*PVILISNLFWLFMMKSRWRTWK*KSRWHSNPHELIWL*APRLMSWRPSILRQKRTGSNTPRRGGQSK*MKRGIKAKQVT 438 GYM* +*+S * P QR HC*RK S+ + T D++ WQW ESTY+ P C +RV W ++WT RQD P I ISNL L MMK RWRT K K+R NP + IWL*APR MS PSI +QK TGSN PR+G QS+ M +GI A+Q T Subject 3339 GYM*PRH*RST*SPMQRVHC*RKYSKVKLTEDRRLWQWLESTYRTPPCYLRRVDWLKRWTMRQDWPAIPISNLS*LCMMK*RWRT*KSKNR*LWNPRKPIWL*APR*MSSHPSISKQKNTGSNKPRQGEQSRSMMKGIVARQET 3770
Range 4: 3339 to 3770 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
156.9 bits(336) | 0.0 | 81/144(56%) | 0/144(0%) | Plus/Minus |
Query 7 GYLLRLDTPLHLFALSAPPRCIAPCPLLP*DRRAPTH*SWCSEPNEFVWVRVPPALLFPRPPSRFHHKEPEEI*DKDHRLVLPRSPLSRPAYSLRTAQWSLVCAFEPLPLFLISCTSPP*ALSSAVCSLRW*SDAFSVQESHVS 438 G L R T H AL A PR +AP LL *DRR TH SWCSEPN F WV P L RPPS FHH E EI*D+D R +LP SP +P YS + A+W VCAF PLP I C * LSSAV SL W*S A SV HVS Subject 3339 GLLPRHYTLHHRSALFALPRFVAPGILLL*DRRVRTHSSWCSEPNGFSWVPELPVLRLLRPPSLFHHTELGEI*DRDRRPILPHSPPFQPVYSPQIARWCPVCAF*PLPQSPIFCKFHL*VLSSAVYSLHW*SGASSVPGLHVS 3770
Range 5: 3340 to 3468 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
92.7 bits(196) | 0.0 | 40/43(93%) | 0/43(0%) | Plus/Minus |
Query 309 GMCFRTIATISDLLYVSPLSTFFSSVLFALVIRCFFSTGVTCI 437 GMCF TIATISDLL VSPLSTFFSSVLFALVIRCFFS GVTCI Subject 3340 GMCFLTIATISDLL*VSPLSTFFSSVLFALVIRCFFSAGVTCI 3468
Range 6: 3625 to 3774 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
87.2 bits(184) | 0.0 | 41/50(82%) | 0/50(0%) | Plus/Minus |
Query 3 MGLPASP*YPSSSICSVRPASVYCSLSSFALRSKGANSLILVLRAK*VRV 152 +G PASP YPSSSICSVRPASV CS SFALRSKGANS ILVLRAK V V Subject 3625 IGSPASPLYPSSSICSVRPASVCCSRYSFALRSKGANSFILVLRAKWVFV 3774
Range 7: 3340 to 3528 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
71.6 bits(150) | 0.0 | 34/63(54%) | 0/63(0%) | Minus/Plus |
Query 249 DTCDSCTEKASDYQRKEHTAEESAQGGDVQEIRNSGNGSKAHTRDHCAVRRE*AGRDSGLRGK 437 DTC+ TE+A D+Q KE+TAEES Q ++Q+I + GNG KAHT H A+ E* G + GL GK Subject 3340 DTCNPGTEEAPDHQCKEYTAEESTQR*NLQKIGDCGNG*KAHTGHHRAI*GE*TG*NGGL*GK 3528
Grapevine virus A genomic RNA, MP and CP genes
Sequence ID: X75433.2 Length: 7351 Number of Matches: 8
Range 1: 3522 to 3959 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
281.1 bits(616) | 0.0 | 135/146(92%) | 0/146(0%) | Minus/Plus |
Query 2 GIHVTPVLKKHLITNAKSTLLKKVLKGETYRRSEIVAMVRKHIPETTVLFEESRLAETVDYEARLAGDPYLKSLLALYXXXXXXXXXXXEPVALEPTRTHLALSTKINELAPFDLKAKEDREQYTEAGRTEQIDEEGYQGEAGNPM 439 GIHVTP LKK LITNAKSTLLKKVLKGETYRRSEIVAMVRKHIPETTVLFEESRLAETVDYEARLAGDPYLKSLLALYDEIEMED+EIEEPV LEPT+THLALSTK+NELAPFDLKAKE REQ+TEAGRTEQIDE GYQGE G+PM Subject 3522 GIHVTPALKKKLITNAKSTLLKKVLKGETYRRSEIVAMVRKHIPETTVLFEESRLAETVDYEARLAGDPYLKSLLALYDEIEMEDIEIEEPVTLEPTKTHLALSTKMNELAPFDLKAKEHREQHTEAGRTEQIDENGYQGEVGDPM 3959
Range 2: 3525 to 3959 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
189.4 bits(407) | 0.0 | 76/145(52%) | 0/145(0%) | Plus/Minus |
Query 2 HGVTCFALIPLFIYLLCPPRLGVLLPVLFCLKIEGRQLINLGAQSQMSSCGFECHRLFYFHVLHLDFIIKSQKRFEIRITG*SCLVVHCLGQPTLFEQHSGLWYVLSNHCHYF*SPVRLPLEHFLQQCALCVGNQMLFQYRSHMY 436 HGVT F+L+P+ +YL PP L VLLPVLFC +++ +L++L AQ M G ECHRL Y +VLHL +++ QK F++ + LVVH LGQ +QH GLWYVLS+HCHY S V LE+FLQQCA +G+Q L Q R +MY Subject 3525 HGVTHFSLVPILVYLFGPPCLCVLLPVLFCFEVKWCKLVHLCAQG*MGLGGLECHRLLYLYVLHLYLVVQGQKGFKVGVASQPSLVVHRLGQSAFLKQHCGLWYVLSDHCHYLRSSVGFALEYFLQQCAFSIGDQFLLQSRGYMY 3959
Range 3: 3526 to 3708 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
94.1 bits(199) | 0.0 | 37/61(61%) | 0/61(0%) | Minus/Plus |
Query 253 YM*LLY*KSI*LPTQRAHC*RKCSRGRRTGDQK*WQWFESTYQRPLCCSKRVGWPRQWTTR 435 YM* L *+ * P +AHC*RK SR + T D++*WQW ESTYQRP CC ++ WPR+WTTR Subject 3526 YM*PLL*RRN*SPMLKAHC*RKYSRAKPTEDRR*WQWSESTYQRPQCCLRKADWPRRWTTR 3708
Range 4: 3736 to 3960 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
65.7 bits(137) | 0.0 | 35/75(47%) | 0/75(0%) | Minus/Plus |
Query 1 NLFWLFMMKSRWRTWK*KSRWHSNPHELIWL*APRLMSWRPSILRQKRTGSNTPRRGGQSK*MKRGIKAKQVTP* 225 N FW + RWRT +*+SR HS+P I *A R S +QK TGSNT R+GG ++* + G + K VTP* Subject 3736 NPFWPCTTR*RWRT*R*RSR*HSSPPRPI*P*AQR*TSLHHLTSKQKSTGSNTQRQGGPNR*TRMGTREKWVTP* 3960
Range 5: 3524 to 3652 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
81.7 bits(172) | 0.0 | 36/43(84%) | 0/43(0%) | Plus/Minus |
Query 309 GMCFRTIATISDLLYVSPLSTFFSSVLFALVIRCFFSTGVTCI 437 GMCFRTIATISDLL VSPLSTFFSSVL ALVI FF GVTC+ Subject 3524 GMCFRTIATISDLL*VSPLSTFFSSVLLALVISFFFRAGVTCM 3652
Range 6: 3809 to 3958 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.0 bits(166) | 0.0 | 37/50(74%) | 0/50(0%) | Plus/Minus |
Query 3 MGLPASP*YPSSSICSVRPASVYCSLSSFALRSKGANSLILVLRAK*VRV 152 MG P SP YP SSICSVRPASV CS SFALRS GA+S I VLRAK V V Subject 3809 MGSPTSPWYPFSSICSVRPASVCCSRCSFALRSNGASSFIFVLRAKWVLV 3958
Range 7: 3526 to 3960 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
121.1 bits(258) | 0.0 | 69/145(48%) | 0/145(0%) | Plus/Minus |
Query 1 SWGYLLRLDTPLHLFALSAPPRCIAPCPLLP*DRRAPTH*SWCSEPNEFVWVRVPPALLFPRPPSRFHHKEPEEI*DKDHRLVLPRSPLSRPAYSLRTAQWSLVCAFEPLPLFLISCTSPP*ALSSAVCSLRW*SDAFSVQESHV 435 SWG+ L T L SA P C+AP LL * + S CS N W RV PA L PPS PE I* + + PRSP SRP +TA WSLVCAF PLPL I C P* LSSAVC W*S + S Q HV Subject 3526 SWGHPLLPGTHSRLSVRSALPLCVAPGALLL*GQMVQARSSLCSGLNGSWWARVSPAPLSLCPPSLSRRTGPEGI*GRGRQPA*PRSPPSRPVCFPQTALWSLVCAFGPLPLSPIFCRFRP*VLSSAVCF*HW*SVSSSEQGLHV 3960
Range 8: 3527 to 3709 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
88.1 bits(186) | 0.0 | 36/61(59%) | 0/61(0%) | Minus/Plus |
Query 252 TCDSCTEKASDYQRKEHTAEESAQGGDVQEIRNSGNGSKAHTRDHCAVRRE*AGRDSGLRG 434 TC+ C+E+ +D+Q +HTAEES QG ++Q+I +SGNG KAHTRDH AV + GRD GLRG Subject 3527 TCNPCSEEETDHQC*KHTAEESTQGRNLQKIGDSGNGPKAHTRDHSAV*GKQTGRDGGLRG 3709
Grapevine virus A, complete genome
Sequence ID: NC_003604.2 Length: 7351 Number of Matches: 8
Range 1: 3522 to 3959 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
281.1 bits(616) | 0.0 | 135/146(92%) | 0/146(0%) | Minus/Plus |
Query 2 GIHVTPVLKKHLITNAKSTLLKKVLKGETYRRSEIVAMVRKHIPETTVLFEESRLAETVDYEARLAGDPYLKSLLALYXXXXXXXXXXXEPVALEPTRTHLALSTKINELAPFDLKAKEDREQYTEAGRTEQIDEEGYQGEAGNPM 439 GIHVTP LKK LITNAKSTLLKKVLKGETYRRSEIVAMVRKHIPETTVLFEESRLAETVDYEARLAGDPYLKSLLALYDEIEMED+EIEEPV LEPT+THLALSTK+NELAPFDLKAKE REQ+TEAGRTEQIDE GYQGE G+PM Subject 3522 GIHVTPALKKKLITNAKSTLLKKVLKGETYRRSEIVAMVRKHIPETTVLFEESRLAETVDYEARLAGDPYLKSLLALYDEIEMEDIEIEEPVTLEPTKTHLALSTKMNELAPFDLKAKEHREQHTEAGRTEQIDENGYQGEVGDPM 3959
Range 2: 3525 to 3959 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
189.4 bits(407) | 0.0 | 76/145(52%) | 0/145(0%) | Plus/Minus |
Query 2 HGVTCFALIPLFIYLLCPPRLGVLLPVLFCLKIEGRQLINLGAQSQMSSCGFECHRLFYFHVLHLDFIIKSQKRFEIRITG*SCLVVHCLGQPTLFEQHSGLWYVLSNHCHYF*SPVRLPLEHFLQQCALCVGNQMLFQYRSHMY 436 HGVT F+L+P+ +YL PP L VLLPVLFC +++ +L++L AQ M G ECHRL Y +VLHL +++ QK F++ + LVVH LGQ +QH GLWYVLS+HCHY S V LE+FLQQCA +G+Q L Q R +MY Subject 3525 HGVTHFSLVPILVYLFGPPCLCVLLPVLFCFEVKWCKLVHLCAQG*MGLGGLECHRLLYLYVLHLYLVVQGQKGFKVGVASQPSLVVHRLGQSAFLKQHCGLWYVLSDHCHYLRSSVGFALEYFLQQCAFSIGDQFLLQSRGYMY 3959
Range 3: 3526 to 3708 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
94.1 bits(199) | 0.0 | 37/61(61%) | 0/61(0%) | Minus/Plus |
Query 253 YM*LLY*KSI*LPTQRAHC*RKCSRGRRTGDQK*WQWFESTYQRPLCCSKRVGWPRQWTTR 435 YM* L *+ * P +AHC*RK SR + T D++*WQW ESTYQRP CC ++ WPR+WTTR Subject 3526 YM*PLL*RRN*SPMLKAHC*RKYSRAKPTEDRR*WQWSESTYQRPQCCLRKADWPRRWTTR 3708
Range 4: 3736 to 3960 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
65.7 bits(137) | 0.0 | 35/75(47%) | 0/75(0%) | Minus/Plus |
Query 1 NLFWLFMMKSRWRTWK*KSRWHSNPHELIWL*APRLMSWRPSILRQKRTGSNTPRRGGQSK*MKRGIKAKQVTP* 225 N FW + RWRT +*+SR HS+P I *A R S +QK TGSNT R+GG ++* + G + K VTP* Subject 3736 NPFWPCTTR*RWRT*R*RSR*HSSPPRPI*P*AQR*TSLHHLTSKQKSTGSNTQRQGGPNR*TRMGTREKWVTP* 3960
Range 5: 3524 to 3652 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
81.7 bits(172) | 0.0 | 36/43(84%) | 0/43(0%) | Plus/Minus |
Query 309 GMCFRTIATISDLLYVSPLSTFFSSVLFALVIRCFFSTGVTCI 437 GMCFRTIATISDLL VSPLSTFFSSVL ALVI FF GVTC+ Subject 3524 GMCFRTIATISDLL*VSPLSTFFSSVLLALVISFFFRAGVTCM 3652
Range 6: 3809 to 3958 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.0 bits(166) | 0.0 | 37/50(74%) | 0/50(0%) | Plus/Minus |
Query 3 MGLPASP*YPSSSICSVRPASVYCSLSSFALRSKGANSLILVLRAK*VRV 152 MG P SP YP SSICSVRPASV CS SFALRS GA+S I VLRAK V V Subject 3809 MGSPTSPWYPFSSICSVRPASVCCSRCSFALRSNGASSFIFVLRAKWVLV 3958
Range 7: 3526 to 3960 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
121.1 bits(258) | 0.0 | 69/145(48%) | 0/145(0%) | Plus/Minus |
Query 1 SWGYLLRLDTPLHLFALSAPPRCIAPCPLLP*DRRAPTH*SWCSEPNEFVWVRVPPALLFPRPPSRFHHKEPEEI*DKDHRLVLPRSPLSRPAYSLRTAQWSLVCAFEPLPLFLISCTSPP*ALSSAVCSLRW*SDAFSVQESHV 435 SWG+ L T L SA P C+AP LL * + S CS N W RV PA L PPS PE I* + + PRSP SRP +TA WSLVCAF PLPL I C P* LSSAVC W*S + S Q HV Subject 3526 SWGHPLLPGTHSRLSVRSALPLCVAPGALLL*GQMVQARSSLCSGLNGSWWARVSPAPLSLCPPSLSRRTGPEGI*GRGRQPA*PRSPPSRPVCFPQTALWSLVCAFGPLPLSPIFCRFRP*VLSSAVCF*HW*SVSSSEQGLHV 3960
Range 8: 3527 to 3709 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
88.1 bits(186) | 0.0 | 36/61(59%) | 0/61(0%) | Minus/Plus |
Query 252 TCDSCTEKASDYQRKEHTAEESAQGGDVQEIRNSGNGSKAHTRDHCAVRRE*AGRDSGLRG 434 TC+ C+E+ +D+Q +HTAEES QG ++Q+I +SGNG KAHTRDH AV + GRD GLRG Subject 3527 TCNPCSEEETDHQC*KHTAEESTQGRNLQKIGDSGNGPKAHTRDHSAV*GKQTGRDGGLRG 3709