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Queries

Nucleotide Sequence (432 letters)

Query ID:ds2015-149_24
Query definition:No definition line
Query length:218
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 8 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
44
88
132
176
220
264
308
352
396
432

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
281.2 281.2 31% 9.352e-84 98% AQV11970

Alignments

polyprotein [Grapevine rupestris vein feathering virus]

Sequence ID: gb|AQV11970.1| Length: 2118 Number of Matches: 1

Range 1: 1037 to 1172 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
281.2 bits(718) 0.0 133/136(98%) 0/136(0%) Plus/Plus
Query       23  WLGGGKSYPICQLLKTKPCRNYKIAVPTVELRNEWKDSLKSSPADRWRLGTWESSLLKSARIVVIDEVYKLPRGYLDLAIHADSTAQLFIVLGDPLQGEYHSTNPNSSNARLSSEIKHLQPFMDMYCLWSHRIPRN  430
                + G GKSYPICQLLKTKPCRNYKIAVPTVELRNEWKDSLKSSPADRWRLGTWESSLLKSARIVVIDEVYKLPRGYLDLAIHADSTAQLFIVLGDPLQGEYHSTNPNSSNARLSSEIKHLQPFMDMYCLWSHRIPRN
Subject   1037  FAGCGKSYPICQLLKTKPCRNYKIAVPTVELRNEWKDSLKSSPADRWRLGTWESSLLKSARIVVIDEVYKLPRGYLDLAIHADSTAQLFIVLGDPLQGEYHSTNPNSSNARLSSEIKHLQPFMDMYCLWSHRIPRN  1172

Nucleotide Sequence (373 letters)

Query ID:ds2015-149_24
Query definition:No definition line
Query length:218
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 8 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
38
76
114
152
190
228
266
304
342
373

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
255.4 255.4 33% 4.937e-75 96% YP_009351862

Alignments

polyprotein [Grapevine rupestris vein feathering virus]

Sequence ID: ref|YP_009351862.1| Length: 2118 Number of Matches: 1

See 1 more title(s)

Range 1: 251 to 374 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
255.4 bits(651) 0.0 119/124(96%) 0/124(0%) Minus/Plus
Query        2  ARDITRYPEVSTSPPECSTWFTHDSIMYLSAEGVAGCFQTCPHLERLYASLVVPPESSFTDLSFAPSLYRYRFHGDQLIYRLEENPSHSYQQPKSALKWLQTNSIQGNDIFLAITRLESWGPVH  373
                ARDITRYPEVST+PPECSTWF HDSIMYLSAE VAGCFQ CPHLERLYASLVVPPES+FTDLSFAPSLYRYRFHGDQLIYRLEENPSHSYQQPKSALKWLQTNSIQGNDIFLAITRLESWGPVH
Subject    251  ARDITRYPEVSTTPPECSTWFMHDSIMYLSAEEVAGCFQACPHLERLYASLVVPPESAFTDLSFAPSLYRYRFHGDQLIYRLEENPSHSYQQPKSALKWLQTNSIQGNDIFLAITRLESWGPVH  374

Nucleotide Sequence (410 letters)

Query ID:ds2015-149_24
Query definition:No definition line
Query length:218
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 8 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
41
82
123
164
205
246
287
328
369
410

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
261.2 261.2 32% 9.395e-77 95% AOX49247

Alignments

polyprotein, partial [Grapevine rupestris vein feathering virus]

Sequence ID: gb|AOX49247.1| Length: 2112 Number of Matches: 1

Range 1: 1762 to 1890 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
261.2 bits(666) 0.0 125/132(95%) 3/132(2%) Plus/Plus
Query       13  VGCVWLPGCIRSPIALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPIEAVPYQSAVFDFFCRHASEDIKVMFKLGRVEISLFSHLLHKLSWLSYSTYSMLNSLQRRALRGKAVRQHFPGDSKE  408
                VGC    GCIRSP+ALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGD+FWNLLPIE+VPYQSAVFDFFCRHASEDIKVMFKLGRVEISLFSHLLHKLSWLSYSTYSMLNSLQRRALRGKAVRQHFPGDSKE
Subject   1762  VGCE---GCIRSPVALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDSFWNLLPIESVPYQSAVFDFFCRHASEDIKVMFKLGRVEISLFSHLLHKLSWLSYSTYSMLNSLQRRALRGKAVRQHFPGDSKE  1890

Nucleotide Sequence (176 letters)

Query ID:ds2015-149_24
Query definition:No definition line
Query length:218
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 8 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
18
36
54
72
90
108
126
144
162
176

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
115.9 115.9 33% 1.774e-30 90% AQU14366

Alignments

polyprotein, partial [Grapevine rupestris vein feathering virus]

Sequence ID: gb|AQU14366.1| Length: 163 Number of Matches: 1

Range 1: 57 to 114 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
115.9 bits(289) 0.0 52/58(90%) 0/58(0%) Minus/Plus
Query        2  SYATEFSIGHSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFS  175
                SYA EFSIGHSLGDAFWNLLPID+VPYQSAVFDFFCRHA ED+KVMFKLGRVE+SLF+
Subject     57  SYAAEFSIGHSLGDAFWNLLPIDAVPYQSAVFDFFCRHAPEDVKVMFKLGRVEISLFA  114

Nucleotide Sequence (142 letters)

Query ID:ds2015-149_24
Query definition:No definition line
Query length:218
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 8 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
15
30
45
60
75
90
105
120
135
142

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
96.7 96.7 33% 2.885e-23 91% AQU14366

Alignments

polyprotein, partial [Grapevine rupestris vein feathering virus]

Sequence ID: gb|AQU14366.1| Length: 163 Number of Matches: 1

Range 1: 57 to 103 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
96.7 bits(239) 0.0 43/47(91%) 0/47(0%) Minus/Plus
Query        1  SYATEFSIGHSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMF  141
                SYA EFSIGHSLGDAFWNLLPID+VPYQSAVFDFFCRHA ED+KVMF
Subject     57  SYAAEFSIGHSLGDAFWNLLPIDAVPYQSAVFDFFCRHAPEDVKVMF  103

Nucleotide Sequence (734 letters)

Query ID:ds2015-149_24
Query definition:No definition line
Query length:218
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 8 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
74
148
222
296
370
444
518
592
666
734

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
448.0 448.0 33% 7.547e-152 88% AAN52168

Alignments

replicase-associated polyprotein, partial [Grapevine rupestris vein feathering virus]

Sequence ID: gb|AAN52168.1| Length: 559 Number of Matches: 1

Range 1: 206 to 449 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
448.0 bits(1151) 0.0 214/244(88%) 0/244(0%) Minus/Plus
Query        3  EGCIRSPVALFAKLMVCVDDGTIQEKLLSYATEFSIGHSLGDAFWNLLPIESVPYQSAVFDFFCRHAPEDVKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSIQRRALRGKAVRQHFPGDSKEVTELQGELLHTFSMSSAPRVLTGGLHLPSSAPMSNETQLPISGRPSRDDHRSDPQPSLPLAPQVKESQALSLSIPFQWVALIIKSDSAAFTVDLAASTTLKKLTDPFRSCEITHLEVV  734
                EGCIRSPVALFAKLMVCVDDGTI EK++SYATEFSIGHSLGDAFWNLLP+E+VPYQSAVFDFFCRHAPEDVKVMFKLGRVEVSLF+HLL KL+WLSYS+Y+ LNS+QRRALRGKAVRQHFPGDSKEVTELQGELLHTFSMSS P  LTGGL L ++ PMSNE QLP SGRPSRDDHR+DPQP+LP+AP+V+ES ALSL+IPFQWVALIIKSDSAAFTVDLAASTTLKKLTDPFRSCEIT LEVV
Subject    206  EGCIRSPVALFAKLMVCVDDGTIDEKMISYATEFSIGHSLGDAFWNLLPLEAVPYQSAVFDFFCRHAPEDVKVMFKLGRVEVSLFAHLLSKLTWLSYSSYAYLNSLQRRALRGKAVRQHFPGDSKEVTELQGELLHTFSMSSPPSKLTGGLLLSTTPPMSNEAQLPASGRPSRDDHRTDPQPALPVAPKVQESPALSLTIPFQWVALIIKSDSAAFTVDLAASTTLKKLTDPFRSCEITQLEVV  449

Nucleotide Sequence (122 letters)

Query ID:ds2015-149_24
Query definition:No definition line
Query length:218
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 8 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
13
26
39
52
65
78
91
104
117
122

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
81.6 81.6 33% 1.185e-17 88% AQU14366

Alignments

polyprotein, partial [Grapevine rupestris vein feathering virus]

Sequence ID: gb|AQU14366.1| Length: 163 Number of Matches: 1

Range 1: 49 to 88 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
81.6 bits(200) 0.0 35/40(88%) 0/40(0%) Minus/Plus
Query        3  GTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSVPYQSAVF  122
                GTIDE+++SYA EFSIGHSLGDAFWNLLPID+VPYQSAVF
Subject     49  GTIDEEMISYAAEFSIGHSLGDAFWNLLPIDAVPYQSAVF  88

Nucleotide Sequence (584 letters)

Query ID:ds2015-149_24
Query definition:No definition line
Query length:218
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 8 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
59
118
177
236
295
354
413
472
531
584

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
302.4 386.7 34% 3.36e-90 91% YP_009351862

Alignments

polyprotein [Grapevine rupestris vein feathering virus]

Sequence ID: ref|YP_009351862.1| Length: 2118 Number of Matches: 2

See 1 more title(s)

Range 1: 1811 to 1967 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
302.4 bits(773) 0.0 148/157(94%) 3/157(2%) Plus/Plus
Query        2  LLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSLQRRALRGKAVRQHFPGDSKEVTELQGELLHTFSMSSTPRVLTGGLILPASAPMSNEAQLPVSGRPSRDDHRSDPQPTLPLAPKVQESPALT---PFQ  463
                LLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSLQRRAL+GKAVRQHFPGDSKEVTELQGELLHTFSMS+TPRVLTGGL+LP SAPMSNEAQLPVSGRPSRDDHRSDPQPT+PLAPKVQESPAL+   PFQ
Subject   1811  LLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSLQRRALKGKAVRQHFPGDSKEVTELQGELLHTFSMSTTPRVLTGGLLLPVSAPMSNEAQLPVSGRPSRDDHRSDPQPTIPLAPKVQESPALSLSIPFQ  1967

Range 2: 1900 to 1943 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.3 bits(207) 0.0 40/44(91%) 0/44(0%) Plus/Plus
Query      451  HTFSMSSTPRVLTGGLILPASAHMSNEAQLPVSGRPSRDDHRSD  582
                HTFSMS+TPRVLTGGL+LP SA MSNEAQLPVSGRPSRDDHRSD
Subject   1900  HTFSMSTTPRVLTGGLLLPVSAPMSNEAQLPVSGRPSRDDHRSD  1943