This html page seems to have been stripped by Galaxy.
Disable Galaxy's html sanitization feature to view the full page (see sanitize_all_html in your galaxy's universe_wsgi.ini), or download this page instead of viewing it in Galaxy.

Queries

Nucleotide Sequence (545 letters)

Query ID:ds2016-58_76
Query definition:No definition line
Query length:489
Program:TBLASTX 2.2.29+
Database:/save/stheil/db/refseq_vir/viral.genomic.fna

Graphic Summary

Distribution of 2 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
55
110
165
220
275
330
385
440
495
545

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
96.4 244.8 40% 9.627e-34 36% NC_017990
69.8 159.0 23% 4.959e-27 40% NC_027138

Alignments

Botrytis porri RNA virus 1 RNA 1, complete genome

Sequence ID: Length: 6215 Number of Matches: 4

Range 1: 5177 to 5422 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
96.4 bits(204) 0.0 42/82(51%) 0/82(0%) Plus/Plus
Query        1  HGNVEANKPSVAAQRVTEFYSQWAMLARRGMDRQFCQRVFEQLAIFEIDKDNKVGKHTVLRFLYGTKRGTGLGLYPIAEMPD  246
                HGNVE  + SV  QR+TE YSQ  ML RRG+D    Q+VFE LAI+EI    +V +   L++LYG+KR  GLGL P+    D
Subject   5177  HGNVENKQASVGQQRITEMYSQACMLVRRGLDPARWQKVFEDLAIYEIGYTTQVSRGQCLKYLYGSKRSGGLGLMPLNTATD  5422

Range 2: 5444 to 5668 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.5 bits(141) 0.0 27/75(36%) 0/75(0%) Plus/Plus
Query      271  EVQEVDATVSEELKVAEIIQQNKATRKFKASGDFVSWIEEKYGVTWRHLGKQQAASLFAAANLMEGGAKANVQHQ  495
                E +E    V     +A+ + + +   KFKAS D+V  +E +YGV W+H GK +A +  AA+NL+EG      +H+
Subject   5444  EAEEAAEEVDVAQILADSLVEGRVANKFKASSDYVGTLEREYGVVWKHNGKIKATAQVAASNLVEGITNVGAEHE  5668

Range 3: 5179 to 5403 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
43.7 bits(89) 0.0 29/75(39%) 0/75(0%) Minus/Minus
Query        3  GYSPRPVPRFVPYKNLNTVCLPTLLSLSISKIASCSNTRWQNCLSIPLLANIAHCE*NSVTL*AATEGLLASTFP  227
                G  P+P    +PY+        T +   IS IA  SNT      S PLL +I  CE  SV L   TE  L ST P
Subject   5179  GIKPKPPLLLLPYRYFRHCPRDTWVVYPISYIARSSNTFCHLAGSNPLLTSIQACEYISVILC*PTEACLFSTLP  5403

Range 4: 5467 to 5664 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.3 bits(75) 0.0 26/66(39%) 0/66(0%) Minus/Minus
Query      294  CCTLAFAPPSIXXXXXXXXXXXXLPRCLQVTPYFSSIHDTKSPEALNFLVALFCCIISATLSSSDT  491
                C    F  PS +L AA    A   P C Q TPY  S   T S EALN L  L    +SA++ ++ T
Subject   5467  CSAPTFVIPSTRLDAATCAVALIFPLCFQTTPYSLSNVPT*SLEALNLLATLPSTKLSASICATST  5664

Sclerotinia sclerotiorum botybirnavirus 1 segment 1, complete sequence

Sequence ID: Length: 6457 Number of Matches: 3

Range 1: 5719 to 5940 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
69.8 bits(146) 0.0 31/74(42%) 0/74(0%) Plus/Plus
Query      310  KVAEIIQQNKATRKFKASGDFVSWIEEKYGVTWRHLGKQQAASLFAAANLMEGGAKANVQHQAALVSASQSIFS  531
                + AEII + K   +FKAS D+V    ++Y VTWRH GK +A +  AA N++EG      QH    V+   S FS
Subject   5719  RAAEIIFEQKVYGRFKASRDYVDDTTKRYNVTWRHQGKARATATIAAQNVVEGNKTTQTQHSELEVAVLLSSFS  5940

Range 2: 5416 to 5556 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.4 bits(95) 0.0 19/47(40%) 0/47(0%) Plus/Plus
Query        4  GNVEANKPSVAAQRVTEFYSQWAMLARRGMDRQFCQRVFEQLAIFEI  144
                GNVE+N  S  A R+ E Y  ++ L  R    + CQ  FE LA++E+
Subject   5416  GNVESNIASAGAVRLRELYESFSTLRLRHFKPEMCQYYFEDLAVYEV  5556

Range 3: 5557 to 5652 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
42.8 bits(87) 0.0 16/32(50%) 0/32(0%) Plus/Plus
Query      148  KDNKVGKHTVLRFLYGTKRGTGLGLYPIAEMP  243
                K  K+G+  VLR+LY ++   G+GLYPI +MP
Subject   5557  KHGKLGRVKVLRYLYSSRDQMGMGLYPIHQMP  5652

Nucleotide Sequence (469 letters)

Query ID:ds2016-58_76
Query definition:No definition line
Query length:489
Program:TBLASTX 2.2.29+
Database:/save/stheil/db/refseq_vir/viral.genomic.fna

Graphic Summary

Distribution of 2 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
47
94
141
188
235
282
329
376
423
469

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
130.7 193.2 32% 8.249e-30 38% NC_027138
136.6 237.2 29% 1.392e-31 41% NC_017990

Alignments

Sclerotinia sclerotiorum botybirnavirus 1 segment 1, complete sequence

Sequence ID: Length: 6457 Number of Matches: 2

Range 1: 4234 to 4674 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
130.7 bits(282) 0.0 58/147(39%) 0/147(0%) Plus/Plus
Query       29  WAHSEDDFTQSLYIGNTVGRPHRDVDWDDETKKRSQPGKEIHVITSGGTRESTEQELRAMLMDTLEAEAVYKPGNSPSFADFYKKRANWMIRGSMSGEKNVAKDDKAVWLAINSEGLGVRINTTKTDVAEYVTAGQVWAVLENAPIH  469
                W +SE DF Q LYI   VGRPHR+ DW+ E  KRS   K I   T  G  + +E++ + M++D L +EA ++      F  +Y+ RA WMI+GSMSGEK +   +  V   +   GL V  +  K  +AE V    + AVL+  P+H
Subject   4234  WLYSETDFPQCLYIAGFVGRPHREADWEAENAKRSAEPKPIRKFTKSGFVDMSEEDEKRMILDFLYSEATFRIKRVQGFERWYRSRAEWMIKGSMSGEKTILDTEPVVMAKLKDLGLKVDGHANKMHIAEKVDYTWMIAVLDMDPVH  4674

Range 2: 4245 to 4667 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.5 bits(130) 0.0 53/141(38%) 0/141(0%) Minus/Minus
Query       40  GAFSNTAHTCPAVTYSATSVFVVLILTPSPSLLMANQTALSSFATFFSPDIDPRIIQLARFL*KSANEGLLPGL*TASASNVSISIALSSCSVDSRVPPLVITCISLPGCDLFLVSSSQSTSR*GLPTVLPM*SDCVKSSS  462
                G+ S+TA      T+SA  +      T  P  L    T  S     FSPDIDP II  AR   + +N   L  L  AS    S  I  SS S+ S  P LV   I     DL   S+SQS S  G PT   M   C KS S
Subject   4245  GSMSSTAIIQV*STFSAICILFA*PSTFRPKSLSFAITTGSVSRIVFSPDIDPLIIHSARLRYQRSNPCTLLILNVASEYRKSKIILFSSSSLMSTNPDLVNFRIGFGSADLLAFSASQSASLCGRPTNPAMYKHCGKSVS  4667

Botrytis porri RNA virus 1 RNA 1, complete genome

Sequence ID: Length: 6215 Number of Matches: 3

Range 1: 4004 to 4438 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
136.6 bits(295) 0.0 60/145(41%) 0/145(0%) Plus/Plus
Query       35  HSEDDFTQSLYIGNTVGRPHRDVDWDDETKKRSQPGKEIHVITSGGTRESTEQELRAMLMDTLEAEAVYKPGNSPSFADFYKKRANWMIRGSMSGEKNVAKDDKAVWLAINSEGLGVRINTTKTDVAEYVTAGQVWAVLENAPIH  469
                H+ DD  Q LYI N VGRPHR+ DWDDE KKR++   EI +  +G    + E +L   ++  L  E   +     +F  FY  R NWMI+GS SGE+ +  + K +   +   G+ +R   TKTDVAEYV+A  V A+L++  IH
Subject   4004  HTPDDLVQCLYIANMVGRPHRECDWDDEVKKRTRNVGEIKIARNGKMVPADESQLEEEILQMLLKEGSIRVKKPKTFEQFYSSRGNWMIKGSASGERMLISEYKEIVGQVKGLGVELRERATKTDVAEYVSAQAVLALLDDMAIH  4438

Range 2: 4231 to 4437 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.1 bits(116) 0.0 30/69(43%) 0/69(0%) Minus/Minus
Query      262  CIGAFSNTAHTCPAVTYSATSVFVVLILTPSPSLLMANQTALSSFATFFSPDIDPRIIQLARFL*KSAN  468
                C+   S++A+T  A TYSATSVFV   L+ +PS L     +L S  +  SPD +P IIQ    L*  +N
Subject   4231  CMAMSSSSANTAWADTYSATSVFVARSLSSTPSPLTWPTISLYSDISILSPDAEPLIIQFPLLL*NCSN  4437

Range 3: 3970 to 4137 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
44.6 bits(91) 0.0 24/56(43%) 0/56(0%) Minus/Minus
Query        1  PLVITCISLPGCDLFLVSSSQSTSR*GLPTVLPM*SDCVKSSSLCAQTHPTHSAQI  168
                P +   IS     LFL SSSQS SR GLPT+  M   C +SS +C  +   H  +I
Subject   3970  PFLAILISPTFLVLFLTSSSQSHSRCGLPTMFAMYRHCTRSSGVC*NSPFAHLLRI  4137