Queries
Nucleotide Sequence (468 letters)
Query ID: | ds2016-56_75 |
Query definition: | No definition line |
Query length: | 366 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
240.7 | 240.7 | 24% | 2.726e-69 | 100% | AQN80517 |
Alignments
replicase [Grapevine rupestris stem pitting-associated virus]
Sequence ID: gb|AQN80517.1| Length: 2161 Number of Matches: 1
Range 1: 1710 to 1822 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
240.7 bits(613) | 0.0 | 113/113(100%) | 0/113(0%) | Plus/Plus |
Query 130 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVP 468 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVP Subject 1710 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVP 1822
Nucleotide Sequence (561 letters)
Query ID: | ds2016-56_75 |
Query definition: | No definition line |
Query length: | 366 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
379.0 | 379.0 | 32% | 2.949e-117 | 99% | CCD41769 |
Alignments
RNA-dependent RNA polymerase [Grapevine rupestris stem pitting-associated virus]
Sequence ID: emb|CCD41769.1| Length: 2161 Number of Matches: 1
Range 1: 992 to 1173 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
379.0 bits(972) | 0.0 | 180/182(99%) | 0/182(0%) | Minus/Plus |
Query 11 VETDYGPKVLGSFEVFKGDFHIKKMEEGSIFVITYKAPIRSTGRLRVHSSECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESERLVNPDLSAPAISKQLEENAYAENEMIALFCIRYHVRLIVITPEYEVSWKFGEGEWPLCGILCLKSN 556 +ETDYGPKVLGSFEVFKGDFHIKKMEEGSIFVITYKAPIRSTGRLRVHSSECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESERLVNPDLSAPAISKQLEENAYAENEMIALFCIR+HVRLIVITPEYEVSWKFGEGEWPLCGILCLKSN Subject 992 IETDYGPKVLGSFEVFKGDFHIKKMEEGSIFVITYKAPIRSTGRLRVHSSECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESERLVNPDLSAPAISKQLEENAYAENEMIALFCIRHHVRLIVITPEYEVSWKFGEGEWPLCGILCLKSN 1173
Nucleotide Sequence (593 letters)
Query ID: | ds2016-56_75 |
Query definition: | No definition line |
Query length: | 366 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
376.7 | 376.7 | 33% | 2.468e-116 | 97% | AAC62910 |
Alignments
RNA-dependent RNA polymerase [Grapevine rupestris stem pitting-associated virus]
Sequence ID: gb|AAC62910.1| Length: 2161 Number of Matches: 1
Range 1: 1701 to 1896 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
376.7 bits(966) | 0.0 | 190/196(97%) | 0/196(0%) | Minus/Plus |
Query 2 QESECSNEEWFKTHIPLSNLESTRARRVGKMALKEYREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKIPLKASHNPIMFDEAVREFXXXXXXXXXATIENHAGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQ 589 ESECSNEEWFKTHIPLSNLESTRAR VGKMALKEYREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKIPLKASHN IMF EAV+EFEAK+ASKSAATIENHAGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQ Subject 1701 MESECSNEEWFKTHIPLSNLESTRARWVGKMALKEYREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKIPLKASHNSIMFQEAVQEFEAKKASKSAATIENHAGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQ 1896
Nucleotide Sequence (390 letters)
Query ID: | ds2016-56_75 |
Query definition: | No definition line |
Query length: | 366 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
124.8 | 124.8 | 20% | 1.103e-33 | 99% | NP_047284 |
Alignments
8.4 kDa protein [Rupestris stem pitting-associated virus]
Sequence ID: ref|NP_047284.1| Length: 80 Number of Matches: 1
Range 1: 2 to 80 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
124.8 bits(312) | 0.0 | 78/79(99%) | 0/79(0%) | Plus/Plus |
Query 3 YCLFXXXXXXXXXXXXXXXXHVDSSSGNHQGCFIRATGESILIENCGPSEALASTVKEMLGGLKALGVSRAVEEIDYHC 239 YCLFGILVLVGIVIAIQILAHVDSSSGNHQGCFIRATGESILIENCGPSEALASTVKE+LGGLKALGVSRAVEEIDYHC Subject 2 YCLFGILVLVGIVIAIQILAHVDSSSGNHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVSRAVEEIDYHC 80
Nucleotide Sequence (640 letters)
Query ID: | ds2016-56_75 |
Query definition: | No definition line |
Query length: | 366 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
209.1 | 209.1 | 16% | 1.843e-63 | 100% | BAF34860 |
Alignments
24.4 kDa hypothetical protein [Grapevine rupestris stem pitting-associated virus]
Sequence ID: dbj|BAF34860.1| Length: 221 Number of Matches: 1
Range 1: 1 to 103 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
209.1 bits(531) | 0.0 | 103/103(100%) | 0/103(0%) | Plus/Plus |
Query 331 MNNLVKALSAFEFVGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQ 639 MNNLVKALSAFEFVGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQ Subject 1 MNNLVKALSAFEFVGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQ 103
Nucleotide Sequence (348 letters)
Query ID: | ds2016-56_75 |
Query definition: | No definition line |
Query length: | 366 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
155.2 | 155.2 | 22% | 4.822e-44 | 95% | AQN80518 |
Alignments
triple gene block protein 1 [Grapevine rupestris stem pitting-associated virus]
Sequence ID: gb|AQN80518.1| Length: 221 Number of Matches: 1
Range 1: 145 to 221 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
155.2 bits(391) | 0.0 | 73/77(95%) | 0/77(0%) | Minus/Plus |
Query 116 IIGSPFELAVEGVLICFGKEAVDLAVAHNSNFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ 346 I GSPFEL VEGVLICFGKEAVDLA AHNS+FKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ Subject 145 ITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ 221
Nucleotide Sequence (615 letters)
Query ID: | ds2016-56_75 |
Query definition: | No definition line |
Query length: | 366 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
241.1 | 241.1 | 20% | 4.252e-76 | 96% | BAF34850 |
Alignments
24.4 kDa hypothetical protein [Grapevine rupestris stem pitting-associated virus]
Sequence ID: dbj|BAF34850.1| Length: 221 Number of Matches: 1
Range 1: 1 to 121 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
241.1 bits(614) | 0.0 | 116/121(96%) | 0/121(0%) | Minus/Plus |
Query 6 MNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFTAFTAGVPDTPNLSGRYIKPYSPGCAVKGRINILDEYLSVDDISGFDVLFSDPYQNISVPREAHFIKSKTCRF 368 MNNLVKALSTFEFVG+YSVLRFPVVVHSVPGSGKSSLIREL+TEDESF AFTAGVPDTPNLSGRYIKPYSPGCAVKG+INILDEYLSV DISGFDVLFSDPYQNISVPREAHFIKSKTCRF Subject 1 MNNLVKALSTFEFVGIYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRF 121
Nucleotide Sequence (354 letters)
Query ID: | ds2016-56_75 |
Query definition: | No definition line |
Query length: | 366 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
240.3 | 240.3 | 33% | 6.442e-70 | 98% | AQN80517 |
Alignments
replicase [Grapevine rupestris stem pitting-associated virus]
Sequence ID: gb|AQN80517.1| Length: 2161 Number of Matches: 1
Range 1: 1357 to 1473 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
240.3 bits(612) | 0.0 | 115/117(98%) | 0/117(0%) | Plus/Plus |
Query 2 TFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDEECKVAKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYD 352 TFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK+DLEMDEECKV KAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYD Subject 1357 TFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYD 1473
Nucleotide Sequence (440 letters)
Query ID: | ds2016-56_75 |
Query definition: | No definition line |
Query length: | 366 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
152.5 | 152.5 | 16% | 1.73e-42 | 100% | AAC62911 |
Alignments
triple gene block [Grapevine rupestris stem pitting-associated virus]
Sequence ID: gb|AAC62911.1| Length: 221 Number of Matches: 1
Range 1: 151 to 221 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
152.5 bits(384) | 0.0 | 71/71(100%) | 0/71(0%) | Plus/Plus |
Query 45 TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ 257 TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ Subject 151 TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ 221
Nucleotide Sequence (404 letters)
Query ID: | ds2016-56_75 |
Query definition: | No definition line |
Query length: | 366 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
281.6 | 281.6 | 33% | 3.563e-93 | 99% | CAJ55435 |
Alignments
coat protein, partial [Grapevine rupestris stem pitting-associated virus]
Sequence ID: emb|CAJ55435.1| Length: 223 Number of Matches: 1
Range 1: 68 to 201 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
281.6 bits(719) | 0.0 | 133/134(99%) | 0/134(0%) | Minus/Plus |
Query 1 DVMDEGAIDELIRAFGESGIAESVQFDVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGIKRAPTK 402 +VMDEGAIDELIRAFGESGIAESVQFDVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGIKRAPTK Subject 68 NVMDEGAIDELIRAFGESGIAESVQFDVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGIKRAPTK 201
Nucleotide Sequence (230 letters)
Query ID: | ds2016-56_75 |
Query definition: | No definition line |
Query length: | 366 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
147.1 | 147.1 | 33% | 1.215e-41 | 95% | AAC62911 |
Alignments
triple gene block [Grapevine rupestris stem pitting-associated virus]
Sequence ID: gb|AAC62911.1| Length: 221 Number of Matches: 1
Range 1: 28 to 103 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
147.1 bits(370) | 0.0 | 72/76(95%) | 0/76(0%) | Minus/Plus |
Query 2 SVPGSGKSSLIRELISEDENFIAFTAGVPDSRNLTGRFIKSYSAGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQ 229 SVPGSGKSSLIRELISEDENFIAFTAGVPDS NLTGR+IK YS GCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQ Subject 28 SVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQ 103
Nucleotide Sequence (449 letters)
Query ID: | ds2016-56_75 |
Query definition: | No definition line |
Query length: | 366 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
288.9 | 288.9 | 33% | 2.492e-86 | 96% | NP_047281 |
Alignments
replicase [Rupestris stem pitting-associated virus]
Sequence ID: ref|NP_047281.1| Length: 2161 Number of Matches: 1
Range 1: 537 to 685 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
288.9 bits(738) | 0.0 | 143/149(96%) | 0/149(0%) | Minus/Plus |
Query 2 LEATGQSKLFRFLVDDCVMREVRSSYKVGLFKHIKALTHCFNSCGLQWFLLRQRSNLKFLKDRASSFADLDCDVIKVYQFVTSQAILPEALLSLTKVFVRDSDSKGVSIPILVSRNELNELALPANSALEEPQSVDCNAGRVQASVSSS 448 LEATGQSKLFRFLVDDC MREVRSSYKVGLFKHIKALTHCFNSCGLQWFLLRQRSNLKFLKDRASSFADLDC+VIKVYQ VTSQAILPEALLSLTKVFVRDSDSKGVSIP LVSRNEL ELA PANSALEEPQSVDCNAGRVQASVSSS Subject 537 LEATGQSKLFRFLVDDCAMREVRSSYKVGLFKHIKALTHCFNSCGLQWFLLRQRSNLKFLKDRASSFADLDCEVIKVYQLVTSQAILPEALLSLTKVFVRDSDSKGVSIPRLVSRNELEELAHPANSALEEPQSVDCNAGRVQASVSSS 685