Queries
Nucleotide Sequence (545 letters)
Query ID: | ds2016-58_76 |
Query definition: | No definition line |
Query length: | 489 |
Program: | TBLASTX 2.2.29+ |
Database: | /save/stheil/db/refseq_vir/viral.genomic.fna |
Graphic Summary
Descriptions
Alignments
Range 1: 5177 to 5422 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
96.4 bits(204) | 0.0 | 42/82(51%) | 0/82(0%) | Plus/Plus |
Query 1 HGNVEANKPSVAAQRVTEFYSQWAMLARRGMDRQFCQRVFEQLAIFEIDKDNKVGKHTVLRFLYGTKRGTGLGLYPIAEMPD 246 HGNVE + SV QR+TE YSQ ML RRG+D Q+VFE LAI+EI +V + L++LYG+KR GLGL P+ D Subject 5177 HGNVENKQASVGQQRITEMYSQACMLVRRGLDPARWQKVFEDLAIYEIGYTTQVSRGQCLKYLYGSKRSGGLGLMPLNTATD 5422
Range 2: 5444 to 5668 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
67.5 bits(141) | 0.0 | 27/75(36%) | 0/75(0%) | Plus/Plus |
Query 271 EVQEVDATVSEELKVAEIIQQNKATRKFKASGDFVSWIEEKYGVTWRHLGKQQAASLFAAANLMEGGAKANVQHQ 495 E +E V +A+ + + + KFKAS D+V +E +YGV W+H GK +A + AA+NL+EG +H+ Subject 5444 EAEEAAEEVDVAQILADSLVEGRVANKFKASSDYVGTLEREYGVVWKHNGKIKATAQVAASNLVEGITNVGAEHE 5668
Range 3: 5179 to 5403 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
43.7 bits(89) | 0.0 | 29/75(39%) | 0/75(0%) | Minus/Minus |
Query 3 GYSPRPVPRFVPYKNLNTVCLPTLLSLSISKIASCSNTRWQNCLSIPLLANIAHCE*NSVTL*AATEGLLASTFP 227 G P+P +PY+ T + IS IA SNT S PLL +I CE SV L TE L ST P Subject 5179 GIKPKPPLLLLPYRYFRHCPRDTWVVYPISYIARSSNTFCHLAGSNPLLTSIQACEYISVILC*PTEACLFSTLP 5403
Range 4: 5467 to 5664 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
37.3 bits(75) | 0.0 | 26/66(39%) | 0/66(0%) | Minus/Minus |
Query 294 CCTLAFAPPSIXXXXXXXXXXXXLPRCLQVTPYFSSIHDTKSPEALNFLVALFCCIISATLSSSDT 491 C F PS +L AA A P C Q TPY S T S EALN L L +SA++ ++ T Subject 5467 CSAPTFVIPSTRLDAATCAVALIFPLCFQTTPYSLSNVPT*SLEALNLLATLPSTKLSASICATST 5664
Sclerotinia sclerotiorum botybirnavirus 1 segment 1, complete sequence
Range 1: 5719 to 5940 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
69.8 bits(146) | 0.0 | 31/74(42%) | 0/74(0%) | Plus/Plus |
Query 310 KVAEIIQQNKATRKFKASGDFVSWIEEKYGVTWRHLGKQQAASLFAAANLMEGGAKANVQHQAALVSASQSIFS 531 + AEII + K +FKAS D+V ++Y VTWRH GK +A + AA N++EG QH V+ S FS Subject 5719 RAAEIIFEQKVYGRFKASRDYVDDTTKRYNVTWRHQGKARATATIAAQNVVEGNKTTQTQHSELEVAVLLSSFS 5940
Nucleotide Sequence (469 letters)
Query ID: | ds2016-58_76 |
Query definition: | No definition line |
Query length: | 489 |
Program: | TBLASTX 2.2.29+ |
Database: | /save/stheil/db/refseq_vir/viral.genomic.fna |
Graphic Summary
Descriptions
Alignments
Sclerotinia sclerotiorum botybirnavirus 1 segment 1, complete sequence
Range 1: 4234 to 4674 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
130.7 bits(282) | 0.0 | 58/147(39%) | 0/147(0%) | Plus/Plus |
Query 29 WAHSEDDFTQSLYIGNTVGRPHRDVDWDDETKKRSQPGKEIHVITSGGTRESTEQELRAMLMDTLEAEAVYKPGNSPSFADFYKKRANWMIRGSMSGEKNVAKDDKAVWLAINSEGLGVRINTTKTDVAEYVTAGQVWAVLENAPIH 469 W +SE DF Q LYI VGRPHR+ DW+ E KRS K I T G + +E++ + M++D L +EA ++ F +Y+ RA WMI+GSMSGEK + + V + GL V + K +AE V + AVL+ P+H Subject 4234 WLYSETDFPQCLYIAGFVGRPHREADWEAENAKRSAEPKPIRKFTKSGFVDMSEEDEKRMILDFLYSEATFRIKRVQGFERWYRSRAEWMIKGSMSGEKTILDTEPVVMAKLKDLGLKVDGHANKMHIAEKVDYTWMIAVLDMDPVH 4674
Range 2: 4245 to 4667 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
62.5 bits(130) | 0.0 | 53/141(38%) | 0/141(0%) | Minus/Minus |
Query 40 GAFSNTAHTCPAVTYSATSVFVVLILTPSPSLLMANQTALSSFATFFSPDIDPRIIQLARFL*KSANEGLLPGL*TASASNVSISIALSSCSVDSRVPPLVITCISLPGCDLFLVSSSQSTSR*GLPTVLPM*SDCVKSSS 462 G+ S+TA T+SA + T P L T S FSPDIDP II AR + +N L L AS S I SS S+ S P LV I DL S+SQS S G PT M C KS S Subject 4245 GSMSSTAIIQV*STFSAICILFA*PSTFRPKSLSFAITTGSVSRIVFSPDIDPLIIHSARLRYQRSNPCTLLILNVASEYRKSKIILFSSSSLMSTNPDLVNFRIGFGSADLLAFSASQSASLCGRPTNPAMYKHCGKSVS 4667
Range 1: 4004 to 4438 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
136.6 bits(295) | 0.0 | 60/145(41%) | 0/145(0%) | Plus/Plus |
Query 35 HSEDDFTQSLYIGNTVGRPHRDVDWDDETKKRSQPGKEIHVITSGGTRESTEQELRAMLMDTLEAEAVYKPGNSPSFADFYKKRANWMIRGSMSGEKNVAKDDKAVWLAINSEGLGVRINTTKTDVAEYVTAGQVWAVLENAPIH 469 H+ DD Q LYI N VGRPHR+ DWDDE KKR++ EI + +G + E +L ++ L E + +F FY R NWMI+GS SGE+ + + K + + G+ +R TKTDVAEYV+A V A+L++ IH Subject 4004 HTPDDLVQCLYIANMVGRPHRECDWDDEVKKRTRNVGEIKIARNGKMVPADESQLEEEILQMLLKEGSIRVKKPKTFEQFYSSRGNWMIKGSASGERMLISEYKEIVGQVKGLGVELRERATKTDVAEYVSAQAVLALLDDMAIH 4438
Range 2: 4231 to 4437 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
56.1 bits(116) | 0.0 | 30/69(43%) | 0/69(0%) | Minus/Minus |
Query 262 CIGAFSNTAHTCPAVTYSATSVFVVLILTPSPSLLMANQTALSSFATFFSPDIDPRIIQLARFL*KSAN 468 C+ S++A+T A TYSATSVFV L+ +PS L +L S + SPD +P IIQ L* +N Subject 4231 CMAMSSSSANTAWADTYSATSVFVARSLSSTPSPLTWPTISLYSDISILSPDAEPLIIQFPLLL*NCSN 4437
Range 3: 3970 to 4137 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
44.6 bits(91) | 0.0 | 24/56(43%) | 0/56(0%) | Minus/Minus |
Query 1 PLVITCISLPGCDLFLVSSSQSTSR*GLPTVLPM*SDCVKSSSLCAQTHPTHSAQI 168 P + IS LFL SSSQS SR GLPT+ M C +SS +C + H +I Subject 3970 PFLAILISPTFLVLFLTSSSQSHSRCGLPTMFAMYRHCTRSSGVC*NSPFAHLLRI 4137