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Queries

Nucleotide Sequence (648 letters)

Query ID:ds2016-58_48
Query definition:No definition line
Query length:589
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 3 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
65
130
195
260
325
390
455
520
585
648

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
435.0 1562.5 14% 4.617e-120 49% KC962564.1
431.3 1641.6 19% 5.859e-119 46% DQ855084.2
424.9 1453.1 25% 4.999e-117 38% X75433.2
424.9 1453.1 25% 4.999e-117 38% NC_003604.2
424.0 1220.6 23% 9.436e-117 37% AF007415.2

Alignments

Grapevine virus A isolate I327 5, complete genome

Sequence ID: KC962564.1 Length: 7349 Number of Matches: 15

Range 1: 4318 to 4899 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
435.0 bits(943) 0.0 188/194(97%) 0/194(0%) Plus/Plus
Query       25  AKAGQTIACFAHSVLCRFGPILRQTEKALRELLPENVMIYSQKNYMDLDKWAKTWVESMMGTDSDYEAFDRSQDEKVLDLEVEVLRFFLWPXXXXXXXXXXXXMMGCALGDLAVMRFSGEFGTFFFNTVCNMVFSCMRYHMDRNTPMCFAGDDMYSPGILRVKKDYEATLEQLTLEAKAHNSDEPLLCGWRMNP  606
                AKAGQTIACFAHSVLCRFGPILRQTEKALRELLPENVMIYSQKNYMDLDKWAKTWVESMMGTDSDYEAFDRSQDEKVLDLEVEVLRFFLWPEELIKEYEELKLMMGCALGDLAVMRFSGEFGTFFFNTVCNMVFSCMRYHMDRNTPMCFAGDDMYSPGILRVKKDYEATLEQLTL+AK H S+EPL CGWRM+P
Subject   4318  AKAGQTIACFAHSVLCRFGPILRQTEKALRELLPENVMIYSQKNYMDLDKWAKTWVESMMGTDSDYEAFDRSQDEKVLDLEVEVLRFFLWPEELIKEYEELKLMMGCALGDLAVMRFSGEFGTFFFNTVCNMVFSCMRYHMDRNTPMCFAGDDMYSPGILRVKKDYEATLEQLTLKAKVHVSEEPLFCGWRMSP  4899

Range 2: 4308 to 4535 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
137.6 bits(294) 0.0 63/76(83%) 0/76(0%) Minus/Minus
Query       15  CDLSKAS*SESVPIMLSTQVFAHLSRSI*FFCE*IITFSGRSSLNAFSVCRRMGPNRHKTE*AKHAMVCPAFAIHP  242
                CDLSKAS*SESVPIMLST V AHLSRS+*FF E IITFSGRSSL+AFSVC RMGPN H+TE AKHAMV PAFA  P
Subject   4308  CDLSKAS*SESVPIMLSTHVLAHLSRSM*FF*EYIITFSGRSSLSAFSVCLRMGPNLHRTECAKHAMVWPAFASTP  4535

Range 3: 4632 to 4808 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
124.3 bits(265) 0.0 52/59(88%) 0/59(0%) Minus/Minus
Query      339  FFTLRIPGEYMSSPAKHIGVFRSMW*RIQLNTMLQTVLKKKVPNSPENLITAKSPKAHP  515
                F TLR+PGEY+SSPAKHIGVFRSM *RIQLNT+LQTVLKKKVPNSPENLITA+SP AHP
Subject   4632  FLTLRMPGEYISSPAKHIGVFRSM**RIQLNTILQTVLKKKVPNSPENLITARSPNAHP  4808

Range 4: 4529 to 4657 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.6 bits(78) 0.0 21/43(49%) 0/43(0%) Minus/Minus
Query      236  QLNHPKRTPSSALTPRIP*LAPRATERSAALLPPGPEPFHPVI  364
                Q + P  TPS    PR P LAP ATERSA    P    FH  I
Subject   4529  QPDRPTHTPSLI*APRTPLLAPLATERSAGPPLPSLALFHLAI  4657

Range 5: 4805 to 4894 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.5 bits(69) 0.0 16/30(53%) 0/30(0%) Minus/Minus
Query      512  SFSIRREGVRQSYALWPRVSAVRGWPRSPS  601
                S SI R GV Q+ A WP  S V+  PR+PS
Subject   4805  SSSIHRRGVPQTRAPWP*ASVVQE*PRNPS  4894

Range 6: 4572 to 4895 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
139.4 bits(298) 0.0 64/108(59%) 0/108(0%) Plus/Plus
Query      279  ALLSVARGANQGIRGVKADDGVRFG*FSCDEVLRRIRDLLLQHRLQHGVQLYALPHGPEHPDVLCGGRHVFTRNSKGKEGLRGHPRTADTRGQSA*L*RTPSLRMENE  602
                ALLSVARGAN+G+RG + +DGV  G   CDE+LR IR LLLQH LQ+GV LYAL HGPEHP+VLC   +V   + + +EGLRG+  T D +GQ A +* TP L ME+E
Subject   4572  ALLSVARGANKGVRGAQINDGVCVGRSGCDEILR*IRYLLLQHCLQYGV*LYALSHGPEHPNVLCWR*YVLPWHPESQEGLRGYS*TTDAQGQGARV*GTPLLWMEDE  4895

Range 7: 4298 to 4588 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
119.7 bits(255) 0.0 53/97(55%) 0/97(0%) Plus/Plus
Query        5  WVCLGESQRRGRPSHALLTRFYADSGPSYGRQKRH*GNFCQRM**STHRRIIWISISGQRPGWRA*WERTRITRPLIDHRMKRFWTWR*KCCASFCG  295
                W   G +QRR +PS AL  R  ADSGPS G+ +RH*GNFC R ** T RR  W   +G R GWRA*W +   TRP  D +MK+  TW+ + CASFCG
Subject   4298  WRRGG*TQRRAKPSRALRIRSCADSGPS*GKPRRH*GNFCLRT**YTLRRTTWT*TNGPRHGWRA*WGQIPTTRPSTDRKMKKC*TWKWRSCASFCG  4588

Range 8: 4625 to 4888 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.5 bits(226) 0.0 52/88(59%) 0/88(0%) Plus/Plus
Query      332  **WGALWVI*L**GSQANSGPSSSTPFATWCSVVCATTWTGTPRCALRGTTCIHQEF*G*RRTTRPPSNS*HSRPKRITLTNPFSADG  595
                **WG  W I L** SQ NS PSSST FA WC VVCA TWTGTP+CAL    C     *  RR TR   N+* SRP+   L NP S DG
Subject   4625  **WGVRWAIWL**DSQVNSVPSSSTLFAIWCLVVCAITWTGTPQCALLEMICTPLAS*ESRRITRLLLNN*RSRPRCTCLRNPSSVDG  4888

Range 9: 4317 to 4502 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.2 bits(208) 0.0 38/62(61%) 0/62(0%) Plus/Plus
Query       24  RKGGADHRMLCSLGFMPIRAHPTADRKGIKGTSARECDDLLTEELYGSR*VGKDLGGEHDGN  209
                RKGG +HR+LC+ G + IRAHP A+R+G +GTSA E DD+L+EEL+G R +G+D+GGEHDG+
Subject   4317  RKGGPNHRVLCAFGPVQIRAHPEANREGTEGTSA*ERDDILSEELHGPRQMGQDMGGEHDGD  4502

Range 10: 4627 to 4893 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
94.5 bits(200) 0.0 52/89(58%) 0/89(0%) Minus/Minus
Query      334  HSPSAEKGFVRVMRFGLECQLFEGGLVVLLYP*NSW*IHVVPRKAHRGVPXXXXXXXXXXXXANGVEEEGPEFA*EPHHS*ITQSAPHH  600
                H PS E+GF+R +  GLE QLF+  LV+LL   ++  +H++  KAH GVPVHV+AHTT+HH+AN VEEEG EF *E HHS I Q  PHH
Subject   4627  HPPSTEEGFLRHVHLGLERQLFKSSLVILLDSQDARGVHIISSKAHWGVPVHVIAHTTKHHIANSVEEEGTEFT*ESHHSQIAQRTPHH  4893

Range 11: 4298 to 4456 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
60.6 bits(126) 0.0 28/53(53%) 0/53(0%) Minus/Minus
Query        5  PYNSSVSRSSHSLAEVPLMPFLSAVGWARIGIKPSEQSMRWSAPPLRFTQTHP  163
                P +SS S SS S AEVP +P   A GWARI   P+ QS RW  PPLR   + P
Subject   4298  PCSSSESISSRSQAEVPSVPSRFASGWARICTGPNAQSTRWFGPPLRLPPSSP  4456

Range 12: 4480 to 4587 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.8 bits(109) 0.0 21/36(58%) 0/36(0%) Minus/Minus
Query      187  PQKEAQHFYLQVQNLFIL*SIKGLVIRVRSHHALHP  294
                PQKEAQ  + QV + FIL S++GLV+ +  HHALHP
Subject   4480  PQKEAQDLHFQV*HFFILRSVEGLVVGICPHHALHP  4587

Range 13: 4309 to 4416 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.8 bits(111) 0.0 24/36(67%) 0/36(0%) Minus/Minus
Query       16  QKFP*CLFCLP*DGPESA*NRVSKACDGLPRLCDSP  123
                QKFP CL  LP DGPESA +R+ KA DGL RLC  P
Subject   4309  QKFPQCLLGLPQDGPESAQDRMRKARDGLARLCVYP  4416

Range 14: 4712 to 4765 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
42.3 bits(86) 0.0 16/18(89%) 0/18(0%) Minus/Minus
Query      419  QSTSGCSGPCGSAYN*TP  472
                QST GCSGPC SAYN*TP
Subject   4712  QSTLGCSGPCDSAYN*TP  4765

Range 15: 4869 to 4898 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.4 bits(47) 0.0 8/10(80%) 0/10(0%) Minus/Minus
Query      576  GFILHPQRRG  605
                G ILHPQ+RG
Subject   4869  GLILHPQKRG  4898

Grapevine virus A isolate GTG11 1, complete genome

Sequence ID: DQ855084.2 Length: 7351 Number of Matches: 14

Range 1: 4317 to 4898 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
431.3 bits(935) 0.0 186/194(96%) 0/194(0%) Plus/Plus
Query       25  AKAGQTIACFAHSVLCRFGPILRQTEKALRELLPENVMIYSQKNYMDLDKWAKTWVESMMGTDSDYEAFDRSQDEKVLDLEVEVLRFFLWPXXXXXXXXXXXXMMGCALGDLAVMRFSGEFGTFFFNTVCNMVFSCMRYHMDRNTPMCFAGDDMYSPGILRVKKDYEATLEQLTLEAKAHNSDEPLLCGWRMNP  606
                AKAGQTIACFAHSVLCRFGPILRQTEKALRELLPENVMIYSQKNYMDLDKWAKTWVESMMGTDSDYEAFDRSQDEKVLDLEVEVLRFFLWPEELIKEYEELKLMMGCALGDLAVMRFSGEFGTFFFNTVCNMVFSCMRYHMDRNTP+CFAGDDMYSPGILRVKKDYE TLEQLTL+AK H S+EPL CGWRM+P
Subject   4317  AKAGQTIACFAHSVLCRFGPILRQTEKALRELLPENVMIYSQKNYMDLDKWAKTWVESMMGTDSDYEAFDRSQDEKVLDLEVEVLRFFLWPEELIKEYEELKLMMGCALGDLAVMRFSGEFGTFFFNTVCNMVFSCMRYHMDRNTPICFAGDDMYSPGILRVKKDYETTLEQLTLKAKVHVSEEPLFCGWRMSP  4898

Range 2: 4307 to 4534 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
153.7 bits(329) 0.0 67/76(88%) 0/76(0%) Minus/Minus
Query       15  CDLSKAS*SESVPIMLSTQVFAHLSRSI*FFCE*IITFSGRSSLNAFSVCRRMGPNRHKTE*AKHAMVCPAFAIHP  242
                CDLS AS*SESVPIMLSTQVFAHLSRS+*FFCE IITFSGRSSLNAFSVC +MGPN HKTE AKHAMVCPAFA  P
Subject   4307  CDLSNAS*SESVPIMLSTQVFAHLSRSM*FFCEYIITFSGRSSLNAFSVCLKMGPNLHKTECAKHAMVCPAFASTP  4534

Range 3: 4631 to 4807 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
130.3 bits(278) 0.0 53/59(90%) 0/59(0%) Minus/Minus
Query      339  FFTLRIPGEYMSSPAKHIGVFRSMW*RIQLNTMLQTVLKKKVPNSPENLITAKSPKAHP  515
                FFT RIPGEYMSSPAKH+GVF SMW*RIQLNTML TVLKKKVPNSPENL+TA+SPKAHP
Subject   4631  FFTRRIPGEYMSSPAKHMGVFLSMW*RIQLNTMLHTVLKKKVPNSPENLMTARSPKAHP  4807

Range 4: 4531 to 4650 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.5 bits(106) 0.0 23/40(57%) 0/40(0%) Minus/Minus
Query      239  NHPKRTPSSALTPRIP*LAPRATERSAALLPPGPEPFHPV  358
                +HPK TPSSA  P IP LAP AT R+A L PP      PV
Subject   4531  DHPKHTPSSASAPHIPLLAPLATRRNAGLQPPDLTLSRPV  4650

Range 5: 4868 to 4897 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.4 bits(47) 0.0 8/10(80%) 0/10(0%) Minus/Minus
Query      576  GFILHPQRRG  605
                G ILHPQ+RG
Subject   4868  GLILHPQKRG  4897

Range 6: 4565 to 4897 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
160.1 bits(343) 0.0 71/111(64%) 0/111(0%) Plus/Plus
Query      273  SAALLSVARGANQGIRGVKADDGVRFG*FSCDEVLRRIRDLLLQHRLQHGVQLYALPHGPEHPDVLCGGRHVFTRNSKGKEGLRGHPRTADTRGQSA*L*RTPSLRMENEP  605
                S A L VARGAN+GI G +ADDGV FG*    EV   +RDLLL HR+QHGVQLYALPHG +HP +LCGG HVF R   G+EGLR HPRTAD + QSA +     LRME+EP
Subject   4565  SPAFLLVARGANKGI*GAEADDGVCFG*SGSHEVFGGVRDLLL*HRVQHGVQLYALPHGQKHPHMLCGG*HVFARYPAGEEGLRDHPRTADAQSQSARVRGASFLRMEDEP  4897

Range 7: 4315 to 4587 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
108.7 bits(231) 0.0 46/91(51%) 0/91(0%) Plus/Plus
Query       23  SQRRGRPSHALLTRFYADSGPSYGRQKRH*GNFCQRM**STHRRIIWISISGQRPGWRA*WERTRITRPLIDHRMKRFWTWR*KCCASFCG  295
                +QR GRP HA   +  AD GPS  RQ++H*G+FCQ+M**   RR  WIS +G++PGWRA*W +T   +    HR ++   WR K C S CG
Subject   4315  TQRPGRP*HASRIQSCADLGPS*DRQRKH*GSFCQKM**YIRRRTTWISTNGRKPGWRA*WGQTPTMKHSTGHRTRKC*IWRLKSCVSSCG  4587

Range 8: 4624 to 4902 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
132.1 bits(282) 0.0 62/93(67%) 0/93(0%) Plus/Plus
Query      332  **WGALWVI*L**GSQANSGPSSSTPFATWCSVVCATTWTGTPRCALRGTTCIHQEF*G*RRTTRPPSNS*HSRPKRITLTNPFSADGE*TLS  610
                **WG LWVI   *G + +SGPSS TP ATWCSVVC TTWT TP  ALRG TCI Q   G*RRTTRPPSNS* S+PK     + FSADG *  S
Subject   4624  **WGVLWVIWQS*GFRGSSGPSSLTPCATWCSVVCVTTWTETPPYALRGMTCIRQVSCG*RRTTRPPSNS*RSKPKCTCPRSLFSADGG*ARS  4902

Range 9: 4316 to 4501 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
87.7 bits(185) 0.0 35/62(56%) 0/62(0%) Plus/Plus
Query       24  RKGGADHRMLCSLGFMPIRAHPTADRKGIKGTSARECDDLLTEELYGSR*VGKDLGGEHDGN  209
                RKG ADH ML +   + I AH   DR+ I+G SAR+CDD+  EEL+GSR +G++LGGEHDG+
Subject   4316  RKGRADHSMLRAFSLVQIWAHLKTDRESIEGASARKCDDIFAEELHGSRQMGENLGGEHDGD  4501

Range 10: 4623 to 4901 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
113.3 bits(241) 0.0 61/93(66%) 0/93(0%) Minus/Minus
Query      331  DRVHSPSAEKGFVRVMRFGLECQLFEGGLVVLLYP*NSW*IHVVPRKAHRGVPXXXXXXXXXXXXANGVEEEGPEFA*EPHHS*ITQSAPHHQ  609
                +R H PSAEK  +  + FG E QLFEGGLVVLL+P ++W IHV+PRKA+ GV VHVV HTTEHHVA+GV+EEGPE   +PH   ITQS PHHQ
Subject   4623  ERAHPPSAEKRLLGHVHFGFERQLFEGGLVVLLHPQDTWRIHVIPRKAYGGVSVHVVTHTTEHHVAHGVKEEGPELPRKPHDCQITQSTPHHQ  4901

Range 11: 4294 to 4461 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.9 bits(120) 0.0 27/56(48%) 0/56(0%) Minus/Minus
Query        2  RDPYNSSVSRSSHSLAEVPLMPFLSAVGWARIGIKPSEQSMRWSAPPLRFTQTHPT  169
                RDP +SS + SSH LAE P M  LS + WA+I  + + +SM WSA PLR     P+
Subject   4294  RDPCSSSANISSHFLAEAPSMLSLSVLRWAQICTRLNARSMLWSARPLRLHPFSPS  4461

Range 12: 4476 to 4586 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.1 bits(92) 0.0 17/37(46%) 0/37(0%) Minus/Minus
Query      184  PQKEAQHFYLQVQNLFIL*SIKGLVIRVRSHHALHPG  294
                PQ+E Q F LQ+ +  +L* ++  ++ V  HHALHPG
Subject   4476  PQEETQDFNLQI*HFLVL*PVECFIVGVCPHHALHPG  4586

Range 13: 4711 to 4896 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
94.1 bits(199) 0.0 39/62(63%) 0/62(0%) Minus/Minus
Query      419  GSFSIRREGVRQSYALWPRVSAVRGWPRSPSLPLEFLVNTCRPPQSTSGCSGPCGSAYN*TP  604
                GS SIRR+   ++ ALW   SAVRGW RSPS P  +L NTC PPQS  GC  PCG+AYN*TP
Subject   4711  GSSSIRRKEAPRTRALWL*ASAVRGWSRSPSSPAGYLANTCHPPQSIWGCFCPCGNAYN*TP  4896

Range 14: 4317 to 4418 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.5 bits(106) 0.0 20/34(59%) 0/34(0%) Minus/Minus
Query       25  WQKFP*CLFCLP*DGPESA*NRVSKACDGLPRLC  126
                WQK P C  CL *DGP+SA + + +AC GLP LC
Subject   4317  WQKLPQCFLCLS*DGPKSAQD*MREACYGLPGLC  4418

Grapevine virus A genomic RNA, MP and CP genes

Sequence ID: X75433.2 Length: 7351 Number of Matches: 13

Range 1: 4317 to 4898 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
424.9 bits(921) 0.0 181/194(93%) 0/194(0%) Plus/Plus
Query       25  AKAGQTIACFAHSVLCRFGPILRQTEKALRELLPENVMIYSQKNYMDLDKWAKTWVESMMGTDSDYEAFDRSQDEKVLDLEVEVLRFFLWPXXXXXXXXXXXXMMGCALGDLAVMRFSGEFGTFFFNTVCNMVFSCMRYHMDRNTPMCFAGDDMYSPGILRVKKDYEATLEQLTLEAKAHNSDEPLLCGWRMNP  606
                AKAGQTIACFAHSVLCRFGPILRQTEKALRELLPE +MIYSQK YMDLDKWAKTWVESMMGTDSDYEAFDRSQDEKVLDLEVEVLRFFLWPE+LI+EYEELKLMMGCALGDLAVMRFSGEFGTFFFNTVCNMVFSCMRYH+DRNTPMCFAGDDMYSPGILRVKKDYEATL+QLTL+AK H S+EPL CGWRM+P
Subject   4317  AKAGQTIACFAHSVLCRFGPILRQTEKALRELLPEKLMIYSQKKYMDLDKWAKTWVESMMGTDSDYEAFDRSQDEKVLDLEVEVLRFFLWPEDLIREYEELKLMMGCALGDLAVMRFSGEFGTFFFNTVCNMVFSCMRYHIDRNTPMCFAGDDMYSPGILRVKKDYEATLDQLTLKAKVHISEEPLFCGWRMSP  4898

Range 2: 4631 to 4807 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
130.3 bits(278) 0.0 53/59(90%) 0/59(0%) Minus/Minus
Query      339  FFTLRIPGEYMSSPAKHIGVFRSMW*RIQLNTMLQTVLKKKVPNSPENLITAKSPKAHP  515
                FFTLR+PGEY+SSPAKHIGVF SMW*RIQLNTML TVLKKKVPNSPENLITA+SP AHP
Subject   4631  FFTLRMPGEYISSPAKHIGVFLSMW*RIQLNTMLHTVLKKKVPNSPENLITARSPNAHP  4807

Range 3: 4307 to 4534 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.0 bits(262) 0.0 57/76(75%) 0/76(0%) Minus/Minus
Query       15  CDLSKAS*SESVPIMLSTQVFAHLSRSI*FFCE*IITFSGRSSLNAFSVCRRMGPNRHKTE*AKHAMVCPAFAIHP  242
                CDLS AS*SESVPIMLST V AHLS+S+ FF E I++FSGRSS +AFSV RRMGPN H TE*AK AMVCPA A  P
Subject   4307  CDLSNAS*SESVPIMLSTHVLAHLSKSMYFF*EYIMSFSGRSSRSAFSV*RRMGPNLHSTE*AKQAMVCPALASTP  4534

Range 4: 4549 to 4632 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.3 bits(73) 0.0 18/28(64%) 0/28(0%) Minus/Minus
Query      257  PSSALTPRIP*LAPRATERSAALLPPGP  340
                PSSA  PR P*L  RA ERSA   PP P
Subject   4549  PSSA*APRTP*LNLRAIERSARPPPPSP  4632

Range 5: 4868 to 4897 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.4 bits(47) 0.0 8/10(80%) 0/10(0%) Minus/Minus
Query      576  GFILHPQRRG  605
                G ILHPQ+RG
Subject   4868  GLILHPQKRG  4897

Range 6: 4658 to 4897 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.8 bits(253) 0.0 52/80(65%) 0/80(0%) Plus/Plus
Query      366  DEVLRRIRDLLLQHRLQHGVQLYALPHGPEHPDVLCGGRHVFTRNSKGKEGLRGHPRTADTRGQSA*L*RTPSLRMENEP  605
                DEVLR IR LLLQHR+QHGV LYALPH  E+PDVLCGG +VF R+S+ +EGLR H R  DT  QS  +* TP L +E+EP
Subject   4658  DEVLRGIRHLLLQHRVQHGV*LYALPHRQEYPDVLCGG*YVFARHSESEEGLRSHSRPVDT*SQSPYI*GTPLLWVEDEP  4897

Range 7: 4297 to 4590 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.0 bits(190) 0.0 43/98(44%) 0/98(0%) Plus/Plus
Query        5  WVCLGESQRRGRPSHALLTRFYADSGPSYGRQKRH*GNFCQRM**STHRRIIWISISGQRPGWRA*WERTRITRPLIDHRMKRFWTWR*KCCASFCGP  298
                W   G   RR +PS   L R   DSGP   + ++  G+ C R  * T R+  W  I+G R G RA*W RT  TR   DH+ ++ WTWR + CASF GP
Subject   4297  WKRGGWMLRRDKPSPVSLIRCCVDSGPFCVKLRKRYGSSCPRSS*YTLRKSTWTWINGLRRG*RA*WGRTPTTRHSTDHKTRKCWTWRWRSCASFYGP  4590

Range 8: 4657 to 4887 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
114.7 bits(244) 0.0 52/77(68%) 0/77(0%) Plus/Plus
Query      365  **GSQANSGPSSSTPFATWCSVVCATTWTGTPRCALRGTTCIHQEF*G*RRTTRPPSNS*HSRPKRITLTNPFSADG  595
                **GS  NS PSSSTP ATWC VVC TT TG PRCALRG  CI Q F* *RR T+P S S*H +PK I L NP S  G
Subject   4657  **GSPGNSAPSSSTPCATWCLVVCVTT*TGIPRCALRGMICIRQAF*E*RRITKPLSTS*HLKPKSIYLRNPSSVGG  4887

Range 9: 4322 to 4636 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.0 bits(190) 0.0 51/105(49%) 0/105(0%) Plus/Plus
Query       30  GGADHRMLCSLGFMPIRAHPTADRKGIKGTSARECDDLLTEELYGSR*VGKDLGGEHDGNXXXXXXXXXITXXXXXXXXXRSAALLSVARGANQGIRGVKADDGV  344
                GG +HR+  S G + IRAH  ++ +   G  ARE  D+L+E+++G  *+G D+G EHDG+GL LRG+  IT  + +G GG   ALLS+AR  NQG+RG  ADDG+
Subject   4322  GGTNHRLFRSFGAV*IRAHSASN*ESATGAPAREAHDILSEKVHGLG*MG*DVGREHDGDGLRLRGIRQITRRESAGLGGGGLALLSMARRFNQGVRGA*ADDGM  4636

Range 10: 4479 to 4892 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
156.9 bits(336) 0.0 82/138(59%) 0/138(0%) Minus/Minus
Query      187  HSPSAEKGFVRVMRFGLECQLFEGGLVVLLYP*NSW*IHVVPRKAHRGVPXXXXXXXXXXXXANGVEEEGPEFA*EPHHS*ITQSAPHHQXXXXXXXXXXLGPQKEAQHFYLQVQNLFIL*SIKGLVIRVRSHHALHP  600
                H P  E+GF+R M FG +CQL E G V+LL+  N+W IH++PRKAHRG+PV+VV HTT+HHVA+GVEEEG EF  EPHH  +     HHQL LLV  D*+ GP KEAQ  +LQVQ+  +L*S++ LV+ VR HHAL+P
Subject   4479  HPPPTEEGFLRYMDFGFKCQLVESGFVILLHSQNAWRIHIIPRKAHRGIPVYVVTHTTKHHVAHGVEEEGAEFPGEPHHRQVA*CTSHHQLKLLVLPD*IFGP*KEAQDLHLQVQHFLVL*SVECLVVGVRPHHALYP  4892

Range 11: 4321 to 4464 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.1 bits(68) 0.0 18/48(38%) 0/48(0%) Minus/Minus
Query       29  YRDPYNSSVSRSSHSLAEVPLMPFLSAVGWARIGIKPSEQSMRWSAPP  172
                Y  P   S S S  S A  P+        WARI   P+E++ RW  PP
Subject   4321  YPSPCTFSESIS*ASRAGAPVALSQFDAEWARIYTAPNERNRRWFVPP  4464

Range 12: 4711 to 4896 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.0 bits(164) 0.0 37/62(60%) 0/62(0%) Minus/Minus
Query      419  GSFSIRREGVRQSYALWPRVSAVRGWPRSPSLPLEFLVNTCRPPQSTSGCSGPCGSAYN*TP  604
                GS S  R GV Q Y LW  VS  R W R+PS   E L NT  PPQSTSG S  CG+AYN*TP
Subject   4711  GSSSTHRRGVPQIYGLWL*VSTGREWLRNPSSLSECLANTYHPPQSTSGYSCLCGNAYN*TP  4896

Range 13: 4308 to 4415 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.8 bits(63) 0.0 16/36(44%) 0/36(0%) Minus/Minus
Query       16  QKFP*CLFCLP*DGPESA*NRVSKACDGLPRLCDSP  123
                Q+ P*    L  +GPES  +R+S+  DGL RL   P
Subject   4308  QELP*RFLSLTQNGPESTQHRMSETGDGLSRLSIHP  4415

Grapevine virus A, complete genome

Sequence ID: NC_003604.2 Length: 7351 Number of Matches: 13

Range 1: 4317 to 4898 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
424.9 bits(921) 0.0 181/194(93%) 0/194(0%) Plus/Plus
Query       25  AKAGQTIACFAHSVLCRFGPILRQTEKALRELLPENVMIYSQKNYMDLDKWAKTWVESMMGTDSDYEAFDRSQDEKVLDLEVEVLRFFLWPXXXXXXXXXXXXMMGCALGDLAVMRFSGEFGTFFFNTVCNMVFSCMRYHMDRNTPMCFAGDDMYSPGILRVKKDYEATLEQLTLEAKAHNSDEPLLCGWRMNP  606
                AKAGQTIACFAHSVLCRFGPILRQTEKALRELLPE +MIYSQK YMDLDKWAKTWVESMMGTDSDYEAFDRSQDEKVLDLEVEVLRFFLWPE+LI+EYEELKLMMGCALGDLAVMRFSGEFGTFFFNTVCNMVFSCMRYH+DRNTPMCFAGDDMYSPGILRVKKDYEATL+QLTL+AK H S+EPL CGWRM+P
Subject   4317  AKAGQTIACFAHSVLCRFGPILRQTEKALRELLPEKLMIYSQKKYMDLDKWAKTWVESMMGTDSDYEAFDRSQDEKVLDLEVEVLRFFLWPEDLIREYEELKLMMGCALGDLAVMRFSGEFGTFFFNTVCNMVFSCMRYHIDRNTPMCFAGDDMYSPGILRVKKDYEATLDQLTLKAKVHISEEPLFCGWRMSP  4898

Range 2: 4631 to 4807 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
130.3 bits(278) 0.0 53/59(90%) 0/59(0%) Minus/Minus
Query      339  FFTLRIPGEYMSSPAKHIGVFRSMW*RIQLNTMLQTVLKKKVPNSPENLITAKSPKAHP  515
                FFTLR+PGEY+SSPAKHIGVF SMW*RIQLNTML TVLKKKVPNSPENLITA+SP AHP
Subject   4631  FFTLRMPGEYISSPAKHIGVFLSMW*RIQLNTMLHTVLKKKVPNSPENLITARSPNAHP  4807

Range 3: 4307 to 4534 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.0 bits(262) 0.0 57/76(75%) 0/76(0%) Minus/Minus
Query       15  CDLSKAS*SESVPIMLSTQVFAHLSRSI*FFCE*IITFSGRSSLNAFSVCRRMGPNRHKTE*AKHAMVCPAFAIHP  242
                CDLS AS*SESVPIMLST V AHLS+S+ FF E I++FSGRSS +AFSV RRMGPN H TE*AK AMVCPA A  P
Subject   4307  CDLSNAS*SESVPIMLSTHVLAHLSKSMYFF*EYIMSFSGRSSRSAFSV*RRMGPNLHSTE*AKQAMVCPALASTP  4534

Range 4: 4549 to 4632 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.3 bits(73) 0.0 18/28(64%) 0/28(0%) Minus/Minus
Query      257  PSSALTPRIP*LAPRATERSAALLPPGP  340
                PSSA  PR P*L  RA ERSA   PP P
Subject   4549  PSSA*APRTP*LNLRAIERSARPPPPSP  4632

Range 5: 4868 to 4897 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.4 bits(47) 0.0 8/10(80%) 0/10(0%) Minus/Minus
Query      576  GFILHPQRRG  605
                G ILHPQ+RG
Subject   4868  GLILHPQKRG  4897

Range 6: 4658 to 4897 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.8 bits(253) 0.0 52/80(65%) 0/80(0%) Plus/Plus
Query      366  DEVLRRIRDLLLQHRLQHGVQLYALPHGPEHPDVLCGGRHVFTRNSKGKEGLRGHPRTADTRGQSA*L*RTPSLRMENEP  605
                DEVLR IR LLLQHR+QHGV LYALPH  E+PDVLCGG +VF R+S+ +EGLR H R  DT  QS  +* TP L +E+EP
Subject   4658  DEVLRGIRHLLLQHRVQHGV*LYALPHRQEYPDVLCGG*YVFARHSESEEGLRSHSRPVDT*SQSPYI*GTPLLWVEDEP  4897

Range 7: 4297 to 4590 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.0 bits(190) 0.0 43/98(44%) 0/98(0%) Plus/Plus
Query        5  WVCLGESQRRGRPSHALLTRFYADSGPSYGRQKRH*GNFCQRM**STHRRIIWISISGQRPGWRA*WERTRITRPLIDHRMKRFWTWR*KCCASFCGP  298
                W   G   RR +PS   L R   DSGP   + ++  G+ C R  * T R+  W  I+G R G RA*W RT  TR   DH+ ++ WTWR + CASF GP
Subject   4297  WKRGGWMLRRDKPSPVSLIRCCVDSGPFCVKLRKRYGSSCPRSS*YTLRKSTWTWINGLRRG*RA*WGRTPTTRHSTDHKTRKCWTWRWRSCASFYGP  4590

Range 8: 4657 to 4887 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
114.7 bits(244) 0.0 52/77(68%) 0/77(0%) Plus/Plus
Query      365  **GSQANSGPSSSTPFATWCSVVCATTWTGTPRCALRGTTCIHQEF*G*RRTTRPPSNS*HSRPKRITLTNPFSADG  595
                **GS  NS PSSSTP ATWC VVC TT TG PRCALRG  CI Q F* *RR T+P S S*H +PK I L NP S  G
Subject   4657  **GSPGNSAPSSSTPCATWCLVVCVTT*TGIPRCALRGMICIRQAF*E*RRITKPLSTS*HLKPKSIYLRNPSSVGG  4887

Range 9: 4322 to 4636 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.0 bits(190) 0.0 51/105(49%) 0/105(0%) Plus/Plus
Query       30  GGADHRMLCSLGFMPIRAHPTADRKGIKGTSARECDDLLTEELYGSR*VGKDLGGEHDGNXXXXXXXXXITXXXXXXXXXRSAALLSVARGANQGIRGVKADDGV  344
                GG +HR+  S G + IRAH  ++ +   G  ARE  D+L+E+++G  *+G D+G EHDG+GL LRG+  IT  + +G GG   ALLS+AR  NQG+RG  ADDG+
Subject   4322  GGTNHRLFRSFGAV*IRAHSASN*ESATGAPAREAHDILSEKVHGLG*MG*DVGREHDGDGLRLRGIRQITRRESAGLGGGGLALLSMARRFNQGVRGA*ADDGM  4636

Range 10: 4479 to 4892 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
156.9 bits(336) 0.0 82/138(59%) 0/138(0%) Minus/Minus
Query      187  HSPSAEKGFVRVMRFGLECQLFEGGLVVLLYP*NSW*IHVVPRKAHRGVPXXXXXXXXXXXXANGVEEEGPEFA*EPHHS*ITQSAPHHQXXXXXXXXXXLGPQKEAQHFYLQVQNLFIL*SIKGLVIRVRSHHALHP  600
                H P  E+GF+R M FG +CQL E G V+LL+  N+W IH++PRKAHRG+PV+VV HTT+HHVA+GVEEEG EF  EPHH  +     HHQL LLV  D*+ GP KEAQ  +LQVQ+  +L*S++ LV+ VR HHAL+P
Subject   4479  HPPPTEEGFLRYMDFGFKCQLVESGFVILLHSQNAWRIHIIPRKAHRGIPVYVVTHTTKHHVAHGVEEEGAEFPGEPHHRQVA*CTSHHQLKLLVLPD*IFGP*KEAQDLHLQVQHFLVL*SVECLVVGVRPHHALYP  4892

Range 11: 4321 to 4464 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.1 bits(68) 0.0 18/48(38%) 0/48(0%) Minus/Minus
Query       29  YRDPYNSSVSRSSHSLAEVPLMPFLSAVGWARIGIKPSEQSMRWSAPP  172
                Y  P   S S S  S A  P+        WARI   P+E++ RW  PP
Subject   4321  YPSPCTFSESIS*ASRAGAPVALSQFDAEWARIYTAPNERNRRWFVPP  4464

Range 12: 4711 to 4896 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.0 bits(164) 0.0 37/62(60%) 0/62(0%) Minus/Minus
Query      419  GSFSIRREGVRQSYALWPRVSAVRGWPRSPSLPLEFLVNTCRPPQSTSGCSGPCGSAYN*TP  604
                GS S  R GV Q Y LW  VS  R W R+PS   E L NT  PPQSTSG S  CG+AYN*TP
Subject   4711  GSSSTHRRGVPQIYGLWL*VSTGREWLRNPSSLSECLANTYHPPQSTSGYSCLCGNAYN*TP  4896

Range 13: 4308 to 4415 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.8 bits(63) 0.0 16/36(44%) 0/36(0%) Minus/Minus
Query       16  QKFP*CLFCLP*DGPESA*NRVSKACDGLPRLCDSP  123
                Q+ P*    L  +GPES  +R+S+  DGL RL   P
Subject   4308  QELP*RFLSLTQNGPESTQHRMSETGDGLSRLSIHP  4415

Grapevine virus A isolate PA3, complete genome

Sequence ID: AF007415.2 Length: 7351 Number of Matches: 12

Range 1: 4317 to 4898 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
424.0 bits(919) 0.0 179/194(92%) 0/194(0%) Plus/Plus
Query       25  AKAGQTIACFAHSVLCRFGPILRQTEKALRELLPENVMIYSQKNYMDLDKWAKTWVESMMGTDSDYEAFDRSQDEKVLDLEVEVLRFFLWPXXXXXXXXXXXXMMGCALGDLAVMRFSGEFGTFFFNTVCNMVFSCMRYHMDRNTPMCFAGDDMYSPGILRVKKDYEATLEQLTLEAKAHNSDEPLLCGWRMNP  606
                AKAGQTIACFAHSVLCRFGPILRQTE+ALRELLPENVMIYSQKNYMDLDKWAKTWVESMMGTDSDYEAFDRSQDEKVLDLEVEVLRFFLWPE+LI+EYEELKLMMGCALGDLAVMRFSGEFGTFFFNT+CNMVFSCMRYHMDRNTP+CFAGDDMYSPGILR K DYE TL+QLTL+AK H S+EPL CGWRM+P
Subject   4317  AKAGQTIACFAHSVLCRFGPILRQTERALRELLPENVMIYSQKNYMDLDKWAKTWVESMMGTDSDYEAFDRSQDEKVLDLEVEVLRFFLWPEDLIREYEELKLMMGCALGDLAVMRFSGEFGTFFFNTICNMVFSCMRYHMDRNTPICFAGDDMYSPGILRTKNDYEGTLDQLTLKAKVHISEEPLFCGWRMSP  4898

Range 2: 4307 to 4531 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.9 bits(240) 0.0 55/75(73%) 0/75(0%) Minus/Minus
Query       15  DLSKAS*SESVPIMLSTQVFAHLSRSI*FFCE*IITFSGRSSLNAFSVCRRMGPNRHKTE*AKHAMVCPAFAIHP  239
                D SKAS*SESVPIMLSTQV AHLSRS+*FF E IITFSG +SL+A SVC  +GPN   TE AK AMV PAFA  P
Subject   4307  DRSKAS*SESVPIMLSTQVLAHLSRSM*FF*EYIITFSGNNSLSALSVCLSIGPNLQSTEWAKQAMV*PAFASTP  4531

Range 3: 4631 to 4807 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.4 bits(239) 0.0 47/59(80%) 0/59(0%) Minus/Minus
Query      339  FFTLRIPGEYMSSPAKHIGVFRSMW*RIQLNTMLQTVLKKKVPNSPENLITAKSPKAHP  515
                FF LRIPGEYMSSPAKHIGV RS+ *R+QLNTML  VLKK VPNSPEN +TA+SP AHP
Subject   4631  FFVLRIPGEYMSSPAKHIGVLRSI**RMQLNTMLHMVLKKNVPNSPENRMTARSPSAHP  4807

Range 4: 4558 to 4656 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.0 bits(94) 0.0 21/33(64%) 0/33(0%) Minus/Minus
Query      266  QLNHPKRTPSSALTPRIP*LAPRATERSAALLP  364
                +L+HP RTPSS   PR P*L P A  RS ALLP
Subject   4558  RLDHPVRTPSSV*APRTP*LNPPAIGRSEALLP  4656

Range 5: 4562 to 4897 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
119.7 bits(255) 0.0 56/112(50%) 0/112(0%) Plus/Plus
Query      270  RSAALLSVARGANQGIRGVKADDGVRFG*FSCDEVLRRIRDLLLQHRLQHGVQLYALPHGPEHPDVLCGGRHVFTRNSKGKEGLRGHPRTADTRGQSA*L*RTPSLRMENEP  605
                RSA+LL +A G NQG+RG   DDGVR G* S   V  R+RD+LLQH +QHG+ L+AL +G +HP++   G HVFT + + KE L G  R  D+  +SA +*R   L +E+EP
Subject   4562  RSASLLPMAGGFNQGVRGA*TDDGVRTG*SSRHAVFGRVRDILLQHHMQHGI*LHALSYGSQHPNMFRWG*HVFTWDPEDKE*L*GDSRPTDSESESAYI*RAIVLWLEDEP  4897

Range 6: 4297 to 4587 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.8 bits(170) 0.0 46/97(47%) 0/97(0%) Plus/Plus
Query        5  WVCLGESQRRGRPSHALLTRFYADSGPSYGRQKRH*GNFCQRM**STHRRIIWISISGQRPGWRA*WERTRITRPLIDHRMKRFWTWR*KCCASFCG  295
                W     +QRR +P  A  T  + DS     RQK H GN  +RM** T RR  W   +G RPG RA*W R  I RPLID +M++    R*KC AS  G
Subject   4297  WRNAAWTQRRVKP*PASPTPCFVDSALYSDRQKGHSGNCYRRM**YTLRRTTWTWTNGPRPGSRA*WGRIPIMRPLIDLKMRKC*I*R*KCFASSYG  4587

Range 7: 4476 to 4586 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.3 bits(110) 0.0 22/37(59%) 0/37(0%) Minus/Minus
Query      184  PQKEAQHFYLQVQNLFIL*SIKGLVIRVRSHHALHPG  294
                P +EA+HFYL + +  IL SIKGL+I +R HHAL PG
Subject   4476  P*EEAKHFYL*I*HFLILRSIKGLIIGIRPHHALDPG  4586

Range 8: 4623 to 4700 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.4 bits(95) 0.0 19/26(73%) 0/26(0%) Minus/Minus
Query      331  GVEEEGPEFA*EPHHS*ITQSAPHHQ  408
                GVEEE PE A +PH  *ITQ APHHQ
Subject   4623  GVEEECPELARKPHDG*ITQCAPHHQ  4700

Range 9: 4746 to 4892 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.4 bits(84) 0.0 18/49(37%) 0/49(0%) Minus/Minus
Query      454  HSPSAEKGFVRVMRFGLECQLFEGGLVVLLYP*NSW*IHVVPRKAHRGV  600
                H P+ E+   R M F  + QL    L+++L P +  *IHV+P + + GV
Subject   4746  HPPTTEQWLFRYMHFRFQSQLV*SPLIIILCPQDPR*IHVIPSETYWGV  4892

Range 10: 4297 to 4455 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.7 bits(76) 0.0 22/53(42%) 0/53(0%) Minus/Minus
Query        5  PYNSSVSRSSHSLAEVPLMPFLSAVGWARIGIKPSEQSMRWSAPPLRFTQTHP  163
                P +SS S S HS   +P +PFLS     RI    S +S  W  PPLR  +  P
Subject   4297  PCSSSESISLHSPVTIP*VPFLSV*V*GRIYKARSGRSRLWFDPPLRPRRVSP  4455

Range 11: 4316 to 4501 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.0 bits(153) 0.0 30/62(48%) 0/62(0%) Plus/Plus
Query       24  RKGGADHRMLCSLGFMPIRAHPTADRKGIKGTSARECDDLLTEELYGSR*VGKDLGGEHDGN  209
                RKGG++H +L  L  + IR +   DRKG +G    EC+D+L+EEL+G   +G+DLG EHDG+
Subject   4316  RKGGSNHSLLRPLRAL*IRPYTQTDRKGTQGIVTGECNDILSEELHGPGQMGQDLGREHDGD  4501

Range 12: 4624 to 4818 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.0 bits(153) 0.0 35/65(54%) 0/65(0%) Plus/Plus
Query      332  **WGALWVI*L**GSQANSGPSSSTPFATWCSVVCATTWTGTPRCALRGTTCIHQEF*G*RRTTR  526
                **WGA WVI*   G +A+SG SSSTP+ATW    CA  W  TP+    G TCIH   *G R   R
Subject   4624  **WGAHWVI*PSCGFRASSGHSSSTPYATWYLAACAIIWIATPQYVSLGMTCIHLGS*GQRMIMR  4818

Nucleotide Sequence (352 letters)

Query ID:ds2016-58_48
Query definition:No definition line
Query length:589
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 3 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
36
72
108
144
180
216
252
288
324
352

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
205.4 713.9 36% 2.34e-51 48% X75433.2
205.4 713.9 36% 2.34e-51 48% NC_003604.2
202.2 682.3 36% 2.161e-50 46% KC962564.1
180.7 393.7 44% 6.571e-44 40% KX828703.1
194.4 634.1 32% 4.782e-48 44% DQ855084.2

Alignments

Grapevine virus A genomic RNA, MP and CP genes

Sequence ID: X75433.2 Length: 7351 Number of Matches: 6

Range 1: 2007 to 2330 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
205.4 bits(442) 0.0 86/108(80%) 0/108(0%) Minus/Plus
Query       29  GLDDSYDHCLIQRYSAGGSIGFHADDEPCYLPGGSVVTVNLYGDATFEVKENTSGRIEKVELRDGDVYVMGPGMQQTHKHRVTSHTVCRPKHTQHILARSEERRVGKE  352
                GLDDSYDHCLIQRY+AGGSIGFHADDEPCYLPGGSVVTVNL+GDATFEVKEN SG+IEK EL DGDVYVMGPGMQQTHKHRVTSHT  R   T        E R G E
Subject   2007  GLDDSYDHCLIQRYTAGGSIGFHADDEPCYLPGGSVVTVNLHGDATFEVKENQSGKIEKKELHDGDVYVMGPGMQQTHKHRVTSHTDGRCSITLRNKTVDYEARKGDE  2330

Range 2: 2009 to 2227 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
143.1 bits(306) 0.0 63/73(86%) 0/73(0%) Plus/Minus
Query      132  IPGPITYTSPSRSSTFSILPDVFSLTSNVASPYKFTVTTEPPGR*QGSSSAWNPILPPAEYLWIRQ*S*LSSR  350
                IPGPITYTSPS SS FSI PD FS TS VASP K TVTTEPPGR* GSSSAWNPILPPA YLWIRQ*S*LSSR
Subject   2009  IPGPITYTSPSCSSFFSIFPD*FSFTSKVASPCKLTVTTEPPGR*HGSSSAWNPILPPAVYLWIRQ*S*LSSR  2227

Range 3: 2010 to 2285 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
102.3 bits(217) 0.0 48/92(52%) 0/92(0%) Plus/Minus
Query       74  GVFGAANGVRSHSVLVSLLHPGSHHVHVPITQFYFLYPPGCILLDFKRGIPVQVHGHYRTPR*ITGLIICMESYTSAC*VPLDQTMIITII*  349
                G   AA  VR +SVLVSLLH  +HHVH+P+     L  PG IL   K  + V + GH  TP *+   IIC+ESYT+ C V LDQTMI+ II*
Subject   2010  GDAAAAIRVRGNSVLVSLLHSWTHHVHIPVV*LLLLDLPGLILFHLKSSVAV*IDGHDGTPW*VAWFIICVESYTAPCRVSLDQTMIVAII*  2285

Range 4: 2012 to 2290 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
100.5 bits(213) 0.0 52/93(56%) 0/93(0%) Minus/Plus
Query       69  R**L*SLSDPKVLSRRKYRIPCR**ALLSTWGFCSDRELVRGCHV*SQGEYIREDRESRTA*WGRVRDGTRDAANSQAQSDFSHRLPPQTHPT  347
                R**L SLSDPK+  R +YRIP R** +L T GF  DR+  R  + * + E IREDRE      G VRDG+R+A NSQAQS  SH  P Q HP+
Subject   2012  R**LRSLSDPKIHGRGQYRIPRR**TMLPTRGFRRDRQFTRRRYF*GERESIREDREEGATRRGCVRDGSRNATNSQAQSYLSHGWPLQHHPS  2290

Range 5: 2011 to 2271 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.4 bits(191) 0.0 44/87(51%) 0/87(0%) Plus/Minus
Query       88  GKRCEKSLCACEFAASRVPSRTRPHHAVLLSLSSRMYSP*LQTWHPRTSSRSLQNPQVDNRAHHLHGILYFRLLSTFGSDNDHNYHL  348
                G  CE+ LCACEF A   PSRT P      S SSR+ S   Q    R + RS +NP V +  HHL GILY  L   FGSDND +YHL
Subject   2011  GHPCER*LCACEFVAFLDPSRTHPRRVAPSSRSSRIDSLSPQK*RRRVN*RSRRNPLVGSMVHHLRGILYCPLPCIFGSDNDRSYHL  2271

Range 6: 2038 to 2286 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.1 bits(151) 0.0 40/83(48%) 0/83(0%) Minus/Plus
Query       73  SKGTQQAEV*DSMQMMSPVIYLGVL**P*TCTGMPRLKSRRIHPGG*RK*NCVMGTCT*WDPGCSKLTSTE*LLTPFAAPNTP  321
                SK T+Q  V*DS QMM+   Y GV  *P   T    L+ +RI+PG  R+ +   G CT*W   C+KLTSTE  LT  AA  +P
Subject   2038  SKDTRQGAV*DSTQMMNHATYQGVPS*PSIYTATLLLR*KRINPGRSRRRSYTTGMCT*WVQECNKLTSTELPLTRMAAAASP  2286

Grapevine virus A, complete genome

Sequence ID: NC_003604.2 Length: 7351 Number of Matches: 6

Range 1: 2007 to 2330 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
205.4 bits(442) 0.0 86/108(80%) 0/108(0%) Minus/Plus
Query       29  GLDDSYDHCLIQRYSAGGSIGFHADDEPCYLPGGSVVTVNLYGDATFEVKENTSGRIEKVELRDGDVYVMGPGMQQTHKHRVTSHTVCRPKHTQHILARSEERRVGKE  352
                GLDDSYDHCLIQRY+AGGSIGFHADDEPCYLPGGSVVTVNL+GDATFEVKEN SG+IEK EL DGDVYVMGPGMQQTHKHRVTSHT  R   T        E R G E
Subject   2007  GLDDSYDHCLIQRYTAGGSIGFHADDEPCYLPGGSVVTVNLHGDATFEVKENQSGKIEKKELHDGDVYVMGPGMQQTHKHRVTSHTDGRCSITLRNKTVDYEARKGDE  2330

Range 2: 2009 to 2227 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
143.1 bits(306) 0.0 63/73(86%) 0/73(0%) Plus/Minus
Query      132  IPGPITYTSPSRSSTFSILPDVFSLTSNVASPYKFTVTTEPPGR*QGSSSAWNPILPPAEYLWIRQ*S*LSSR  350
                IPGPITYTSPS SS FSI PD FS TS VASP K TVTTEPPGR* GSSSAWNPILPPA YLWIRQ*S*LSSR
Subject   2009  IPGPITYTSPSCSSFFSIFPD*FSFTSKVASPCKLTVTTEPPGR*HGSSSAWNPILPPAVYLWIRQ*S*LSSR  2227

Range 3: 2010 to 2285 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
102.3 bits(217) 0.0 48/92(52%) 0/92(0%) Plus/Minus
Query       74  GVFGAANGVRSHSVLVSLLHPGSHHVHVPITQFYFLYPPGCILLDFKRGIPVQVHGHYRTPR*ITGLIICMESYTSAC*VPLDQTMIITII*  349
                G   AA  VR +SVLVSLLH  +HHVH+P+     L  PG IL   K  + V + GH  TP *+   IIC+ESYT+ C V LDQTMI+ II*
Subject   2010  GDAAAAIRVRGNSVLVSLLHSWTHHVHIPVV*LLLLDLPGLILFHLKSSVAV*IDGHDGTPW*VAWFIICVESYTAPCRVSLDQTMIVAII*  2285

Range 4: 2012 to 2290 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
100.5 bits(213) 0.0 52/93(56%) 0/93(0%) Minus/Plus
Query       69  R**L*SLSDPKVLSRRKYRIPCR**ALLSTWGFCSDRELVRGCHV*SQGEYIREDRESRTA*WGRVRDGTRDAANSQAQSDFSHRLPPQTHPT  347
                R**L SLSDPK+  R +YRIP R** +L T GF  DR+  R  + * + E IREDRE      G VRDG+R+A NSQAQS  SH  P Q HP+
Subject   2012  R**LRSLSDPKIHGRGQYRIPRR**TMLPTRGFRRDRQFTRRRYF*GERESIREDREEGATRRGCVRDGSRNATNSQAQSYLSHGWPLQHHPS  2290

Range 5: 2011 to 2271 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.4 bits(191) 0.0 44/87(51%) 0/87(0%) Plus/Minus
Query       88  GKRCEKSLCACEFAASRVPSRTRPHHAVLLSLSSRMYSP*LQTWHPRTSSRSLQNPQVDNRAHHLHGILYFRLLSTFGSDNDHNYHL  348
                G  CE+ LCACEF A   PSRT P      S SSR+ S   Q    R + RS +NP V +  HHL GILY  L   FGSDND +YHL
Subject   2011  GHPCER*LCACEFVAFLDPSRTHPRRVAPSSRSSRIDSLSPQK*RRRVN*RSRRNPLVGSMVHHLRGILYCPLPCIFGSDNDRSYHL  2271

Range 6: 2038 to 2286 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.1 bits(151) 0.0 40/83(48%) 0/83(0%) Minus/Plus
Query       73  SKGTQQAEV*DSMQMMSPVIYLGVL**P*TCTGMPRLKSRRIHPGG*RK*NCVMGTCT*WDPGCSKLTSTE*LLTPFAAPNTP  321
                SK T+Q  V*DS QMM+   Y GV  *P   T    L+ +RI+PG  R+ +   G CT*W   C+KLTSTE  LT  AA  +P
Subject   2038  SKDTRQGAV*DSTQMMNHATYQGVPS*PSIYTATLLLR*KRINPGRSRRRSYTTGMCT*WVQECNKLTSTELPLTRMAAAASP  2286

Grapevine virus A isolate I327 5, complete genome

Sequence ID: KC962564.1 Length: 7349 Number of Matches: 6

Range 1: 2008 to 2331 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
202.2 bits(435) 0.0 85/108(79%) 0/108(0%) Minus/Plus
Query       29  GLDDSYDHCLIQRYSAGGSIGFHADDEPCYLPGGSVVTVNLYGDATFEVKENTSGRIEKVELRDGDVYVMGPGMQQTHKHRVTSHTVCRPKHTQHILARSEERRVGKE  352
                GLDDSYDHCLIQRY+AGGSIGFHADDEPCYLPGGSVVTVNL GDATFEV+EN SGRIEK EL DGDVYVMGPGMQQTH+HRVTSHT  R   T        E R G E
Subject   2008  GLDDSYDHCLIQRYTAGGSIGFHADDEPCYLPGGSVVTVNLLGDATFEVRENQSGRIEKKELHDGDVYVMGPGMQQTHEHRVTSHTDGRCSITLRNKTIDYESRKGDE  2331

Range 2: 2010 to 2228 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
136.2 bits(291) 0.0 61/73(84%) 0/73(0%) Plus/Minus
Query      132  IPGPITYTSPSRSSTFSILPDVFSLTSNVASPYKFTVTTEPPGR*QGSSSAWNPILPPAEYLWIRQ*S*LSSR  350
                IPGPITYTSPS SS FSI PD FSLTS VASP +FTVTTEPPGR* GSSSA NP+LPPA YLWIRQ*S*LSS+
Subject   2010  IPGPITYTSPSCSSFFSIRPDWFSLTSKVASPSRFTVTTEPPGR*HGSSSA*NPMLPPAVYLWIRQ*S*LSSK  2228

Range 3: 2013 to 2288 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
94.1 bits(199) 0.0 47/92(51%) 0/92(0%) Minus/Plus
Query       72  R**L*SLSDPKVLSRRKYRIPCR**ALLSTWGFCSDRELVRGCHV*SQGEYIREDRESRTA*WGRVRDGTRDAANSQAQSDFSHRLPPQTHP  347
                R**L*SL +P+V  R K+ I CR   +LSTW    DRE   GCH * QGE +  + E     WGRV DG RDAAN +AQ    H  P Q HP
Subject   2013  R**L*SLPNPEVHGRGKHWISCRRRTMLSTWRLRRDRESAWGCHF*GQGEPVGPN*EEGATRWGRVCDGARDAANPRAQGHLPH*WPLQHHP  2288

Range 4: 2011 to 2286 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.3 bits(195) 0.0 45/92(49%) 0/92(0%) Plus/Minus
Query       74  GVFGAANGVRSHSVLVSLLHPGSHHVHVPITQFYFLYPPGCILLDFKRGIPVQVHGHYRTPR*ITGLIICMESYTSAC*VPLDQTMIITII*  349
                G   AA  V    VLV LLHPG HH+HVPI     L     +L D K GIP Q+HGH    R*I   ++CM+S  S   VPLD  +II II*
Subject   2011  GDAAAAISVGGDPVLVGLLHPGPHHIHVPIV*LLLLNSARLVLPDLKSGIPKQIHGHDGASR*IAWFVVCMKSNASPGRVPLD*AVIIAII*  2286

Range 5: 2012 to 2272 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.5 bits(178) 0.0 40/87(46%) 0/87(0%) Plus/Minus
Query       88  GKRCEKSLCACEFAASRVPSRTRPHHAVLLSLSSRMYSP*LQTWHPRTSSRSLQNPQVDNRAHHLHGILYFRLLSTFGSDNDHNYHL  348
                G +C +  CA  FAASR PS TRPH     S      SP* Q WHP+  SRS ++ QVD+    LH I  F    T G  +DH+YHL
Subject   2012  GHQCGR*PCARGFAASRAPSHTRPHRVAPSSQFGPTGSP*PQKWHPQADSRSRRSLQVDSMVRRLHEIQCFPRPCTSGLGSDHSYHL  2272

Range 6: 2039 to 2290 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.0 bits(153) 0.0 39/84(46%) 0/84(0%) Minus/Plus
Query       70  SKGTQQAEV*DSMQMMSPVIYLGVL**P*TCTGMPRLKSRRIHPGG*RK*NCVMGTCT*WDPGCSKLTSTE*LLTPFAAPNTPN  321
                S+GT+  E  D MQ  +  IYL    *P* C GMP L+S R      R+ +  MGTC *W PGCSK TST    T  AA  +P+
Subject   2039  SRGTRPGEALDFMQTTNHAIYLEAPS*P*ICLGMPLLRSGRTSRAELRRRSYTMGTCM*WGPGCSKPTSTGSPPTLMAAAASPS  2290

Grapevine virus A isolate TRAJ2 BR replicase protein, putative 19 kDa protein, movement protein, coat protein, and RNA binding protein genes, complete cds

Sequence ID: KX828703.1 Length: 7161 Number of Matches: 4

Range 1: 1823 to 2146 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
180.7 bits(388) 0.0 77/108(71%) 0/108(0%) Minus/Plus
Query       29  GLDDSYDHCLIQRYSAGGSIGFHADDEPCYLPGGSVVTVNLYGDATFEVKENTSGRIEKVELRDGDVYVMGPGMQQTHKHRVTSHTVCRPKHTQHILARSEERRVGKE  352
                GLDDSYDHCLIQRY+AGGSIGFHADDEPCYLPGGSVVTVNLYGDA        SG+ EK+EL DGDVYVMG GMQQTHKHRV SHT  R   T        E R G E
Subject   1823  GLDDSYDHCLIQRYAAGGSIGFHADDEPCYLPGGSVVTVNLYGDAXXXXXXXQSGKTEKIELHDGDVYVMGAGMQQTHKHRVFSHTDGRCSITLRNKTIDYETRGGDE  2146

Range 2: 1825 to 2043 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.4 bits(252) 0.0 54/73(74%) 0/73(0%) Plus/Minus
Query      132  IPGPITYTSPSRSSTFSILPDVFSLTSNVASPYKFTVTTEPPGR*QGSSSAWNPILPPAEYLWIRQ*S*LSSR  350
                IP PITYTSPS SS FS+ PD        ASPYK TVTTEPPGR*QGSSSA NP+LPPA YL I+Q*S*LSSR
Subject   1825  IPAPITYTSPSCSSIFSVFPDXXXXXXXXASPYKLTVTTEPPGR*QGSSSA*NPMLPPAAYL*IKQ*S*LSSR  2043

Range 3: 1994 to 2089 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.0 bits(105) 0.0 20/32(62%) 0/32(0%) Plus/Minus
Query       86  AANGVRSHSVLVSLLHPGSHHVHVPITQFYFL  181
                AA GVR  SV V LLHP  HHVH+ + Q YFL
Subject   1994  AAIGVREDSVFVGLLHPCPHHVHISVVQLYFL  2089

Range 4: 1829 to 1957 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
43.7 bits(89) 0.0 17/43(40%) 0/43(0%) Plus/Minus
Query      218  GIPVQVHGHYRTPR*ITGLIICMESYTSAC*VPLDQTMIITII  346
                G+PVQV+G+ R P *+   I+ ++   S C + L+Q +I+T+I
Subject   1829  GVPVQVNGNNRAPW*VARFIVRVKPNASPCCISLNQAVIVTVI  1957

Grapevine virus A isolate GTG11 1, complete genome

Sequence ID: DQ855084.2 Length: 7351 Number of Matches: 6

Range 1: 2007 to 2264 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.4 bits(418) 0.0 77/86(90%) 0/86(0%) Minus/Plus
Query       95  GLDDSYDHCLIQRYSAGGSIGFHADDEPCYLPGGSVVTVNLYGDATFEVKENTSGRIEKVELRDGDVYVMGPGMQQTHKHRVTSHT  352
                GLDDSYDHCLIQRY+AGGSIGFHADDEPCYLPGGSVVTVNL+GDATFEVKEN S +IEK EL DGDVYVMGP  QQTHKHRVTSHT
Subject   2007  GLDDSYDHCLIQRYTAGGSIGFHADDEPCYLPGGSVVTVNLFGDATFEVKENKSEKIEKKELHDGDVYVMGPRKQQTHKHRVTSHT  2264

Range 2: 2009 to 2221 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
130.3 bits(278) 0.0 59/71(83%) 0/71(0%) Plus/Minus
Query      138  GPITYTSPSRSSTFSILPDVFSLTSNVASPYKFTVTTEPPGR*QGSSSAWNPILPPAEYLWIRQ*S*LSSR  350
                GPITYTSPS SS FSI  D+FSLTS VASP + TVTTEPPGR*QGSSSAWNPILPPA YL IRQ S*LSSR
Subject   2009  GPITYTSPSCSSFFSIFSDLFSLTSKVASPNRLTVTTEPPGR*QGSSSAWNPILPPAVYL*IRQWS*LSSR  2221

Range 3: 2021 to 2290 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.7 bits(196) 0.0 44/90(49%) 0/90(0%) Minus/Plus
Query       69  L*SLSDPKVLSRRKYRIPCR**ALLSTWGFCSDRELVRGCHV*SQGEYIREDRESRTA*WGRVRDGTRDAANSQAQSDFSHRLPPQTHPT  338
                L* L D +V SRR+YR+P     LLST G    R+ + GC++ SQGE +R+DRE    *W RVRDGT++ AN QAQ    H    Q HP+
Subject   2021  L*PLPDSEVHSRREYRVPRGRRTLLSTRGLSRHRQSIWGCYLRSQGE*VRKDREEGAT*WRRVRDGTKETANPQAQGHLPH*RSLQHHPS  2290

Range 4: 2014 to 2268 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.6 bits(174) 0.0 39/85(46%) 0/85(0%) Plus/Minus
Query       91  KRCEKSLCACEFAASRVPSRTRPHHAVLLSLSSRMYSP*LQTWHPRTSSRSLQNPQVDNRAHHLHGILYFRLLSTFGSDNDHNYH  345
                ++C +  CAC FA S VPSRTR HH    S S R YSP*L+  HP+   R   +P+VD++     G LY RLL T  S + H+ H
Subject   2014  RQCGR*PCACGFAVSLVPSRTRLHHVAPSSRSFRTYSP*LRR*HPQID*R*RLSPRVDSKVRRPRGTLYSRLLCTSESGSGHSCH  2268

Range 5: 2013 to 2285 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.3 bits(158) 0.0 40/91(44%) 0/91(0%) Plus/Minus
Query       74  GVFGAANGVRSHSVLVSLLHPGSHHVHVPITQFYFLYPPGCILLDFKRGIPVQVHGHYRTPR*ITGLIICMESYTSAC*VPLDQTMIITII  346
                G   A   V    VLV LL P SHHVHV I     L   G ILLDF+  IP  + G    P *I   ++ +E YT AC VPL+Q ++I +I
Subject   2013  GDAAATVSVGGDPVLVGLLFPWSHHVHVSIM*LLLLDLFGLILLDFEGSIPK*IDGDD*APG*IARFVVRVEPYTPACCVPLNQAVVIAVI  2285

Range 6: 2041 to 2247 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.8 bits(122) 0.0 34/69(49%) 0/69(0%) Minus/Plus
Query      112  KGTQQAEV*DSMQMMSPVIYLGVL**P*TCTGMPRLKSRRIHPGG*RK*NCVMGTCT*WDPGCSKLTST  318
                +GTQQA V* S +  +  IY G    P    GM   KSRRI P   R+ + +M TCT*WD G SK TST
Subject   2041  RGTQQAGV*GSTRTTNLAIYPGAQSSPSIYLGMLPSKSRRISPKRSRRRSYMMETCT*WDQGNSKPTST  2247

Nucleotide Sequence (439 letters)

Query ID:ds2016-58_48
Query definition:No definition line
Query length:589
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 3 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
44
88
132
176
220
264
308
352
396
439

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
282.4 1120.2 24% 2.198e-74 54% KC962564.1
282.4 1068.7 48% 2.222e-74 57% DQ855084.2
282.0 1103.7 25% 3.006e-74 54% KX828703.1
281.1 1000.1 47% 5.684e-74 47% X75433.2
281.1 1000.1 47% 5.684e-74 47% NC_003604.2

Alignments

Grapevine virus A isolate I327 5, complete genome

Sequence ID: KC962564.1 Length: 7349 Number of Matches: 8

Range 1: 3523 to 3960 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
282.4 bits(619) 0.0 136/146(93%) 0/146(0%) Minus/Plus
Query        2  GIHVTPVLKKHLITNAKSTLLKKVLKGETYRRSEIVAMVRKHIPETTVLFEESRLAETVDYEARLAGDPYLKSLLALYXXXXXXXXXXXEPVALEPTRTHLALSTKINELAPFDLKAKEDREQYTEAGRTEQIDEEGYQGEAGNPM  439
                GIHVTP LKK+LI NAKSTLLKKVLKGETYRRSEIVAMVRKHIP+TTVLFEESRLAETVDYEARLAGDPYLKSLLALYDEIEME+VEIEEPVALEPT+THLALST  NELAPFDLKAKE REQYTE GRTEQIDEEGYQGEAGNPM
Subject   3523  GIHVTPALKKNLINNAKSTLLKKVLKGETYRRSEIVAMVRKHIPDTTVLFEESRLAETVDYEARLAGDPYLKSLLALYDEIEMEEVEIEEPVALEPTKTHLALSTMTNELAPFDLKAKEYREQYTEVGRTEQIDEEGYQGEAGNPM  3960

Range 2: 3523 to 3960 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
197.2 bits(424) 0.0 85/146(58%) 0/146(0%) Plus/Minus
Query        2  HGVTCFALIPLFIYLLCPPRLGVLLPVLFCLKIEGRQLINLGAQSQMSSCGFECHRLFYFHVLHLDFIIKSQKRFEIRITG*SCLVVHCLGQPTLFEQHSGLWYVLSNHCHYF*SPVRLPLEHFLQQCALCVGNQMLFQYRSHMYP  439
                H VTCFALIPLFIYL  P    VLL V  C +IEG QLI   A SQ+S  GFECHR FY  +LHLD +I+SQ+ FE+ I  * CLV+HC GQ  L E + G+ Y+LSNH HY  S V L  E+FLQQC L V +Q+L Q R HMYP
Subject   3523  HRVTCFALIPLFIYLFSPAHFCVLLTVFLCFEIEGCQLIGHCA*SQVSLSGFECHRFFYLDLLHLDLVIQSQQGFEVGIAS*PCLVIHCFGQSALLE*YRGVRYMLSNHSHYLGSSVCLAFEYFLQQCTLRVIDQVLLQRRGHMYP  3960

Range 3: 3524 to 3955 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
181.1 bits(389) 0.0 82/144(57%) 0/144(0%) Minus/Plus
Query        7  GYM*LLY*KSI*LPTQRAHC*RKCSRGRRTGDQK*WQWFESTYQRPLCCSKRVGWPRQWTTRQD*PVILISNLFWLFMMKSRWRTWK*KSRWHSNPHELIWL*APRLMSWRPSILRQKRTGSNTPRRGGQSK*MKRGIKAKQVT  438
                GYM*   *+  *  T+R HC*RK S+ R T D +*W WFES Y  P   S+R  WP+QW TRQ *  I  SN  WL M +SRWR  +*K+RWHSNP  L WL*A   MSW PSI +Q+ T SNT +  G ++*MKRGIKAKQVT
Subject   3524  GYM*PRR*RRT*SITRRVHC*RKYSKARHTEDPR*WLWFESIYLTPRYYSRRADWPKQWITRQG*LAIPTSNPCWLCMTRSRWRRSR*KNRWHSNPLRLTWL*AQ*PMSWHPSISKQRNTVSNTQKWAGLNR*MKRGIKAKQVT  3955

Range 4: 3524 to 3955 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
163.7 bits(351) 0.0 83/144(58%) 0/144(0%) Plus/Minus
Query        7  GYLLRLDTPLHLFALSAPPRCIAPCPLLP*DRRAPTH*SWCSEPNEFVWVRVPPALLFPRPPSRFHHKEPEEI*DKDHRLVLPRSPLSRPAYSLRTAQWSLVCAFEPLPLFLISCTSPP*ALSSAVCSLRW*SDAFSVQESHVS  438
                GYLLRLDTPLHL   S P  CIA    L *DRR P H S C EP+E  WVRVPP LL   PPSR  H EP  I* +D +L LPR+PL RP  S R   W  V AFEP PL  I C S  * LSSAV S R+*S + S   SHVS
Subject   3524  GYLLRLDTPLHLSVQSGPLLCIAHGIPLL*DRRVPAHWSLCLEPSES*WVRVPPVLLSRPPPSRSRHTEPTGI*GRDRQLALPRNPLFRPICSPRIVPWCQVYAFEP*PLSRIFCMSRL*VLSSAVYSSRY*SGSSSAPGSHVS  3955

Range 5: 3810 to 3959 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
95.5 bits(202) 0.0 42/50(84%) 0/50(0%) Plus/Minus
Query        3  MGLPASP*YPSSSICSVRPASVYCSLSSFALRSKGANSLILVLRAK*VRV  152
                +GLPASP*YPSSSICSVRP SVYCS  SFALRSKGA+SL++VLRAK*V V
Subject   3810  IGLPASP*YPSSSICSVRPTSVYCSRYSFALRSKGASSLVIVLRAK*VLV  3959

Range 6: 3525 to 3653 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.7 bits(196) 0.0 39/43(91%) 0/43(0%) Plus/Minus
Query      309  GMCFRTIATISDLLYVSPLSTFFSSVLFALVIRCFFSTGVTCI  437
                G+CFRTIATISDLLYVSPLSTFFSSVLFAL+IR FFS GVTCI
Subject   3525  GICFRTIATISDLLYVSPLSTFFSSVLFALLIRFFFSAGVTCI  3653

Range 7: 3525 to 3713 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
81.3 bits(171) 0.0 36/63(57%) 0/63(0%) Minus/Plus
Query      249  DTCDSCTEKASDYQRKEHTAEESAQGGDVQEIRNSGNGSKAHTRDHCAVRRE*AGRDSGLRGK  437
                DTCD   E+  D  R+E+TAEES Q  D+Q+IR+SG GSKA+T  H  +R E  GR+SGLRGK
Subject   3525  DTCDPGAEEEPDQ*REEYTAEESTQRRDIQKIRDSGYGSKAYT*HHGTIRGEQIGRNSGLRGK  3713

Range 8: 3819 to 3896 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
26.3 bits(51) 0.0 14/26(54%) 0/26(0%) Minus/Plus
Query       66  SFGSEHQD**VGALRS*GKRGQGAIH  143
                S GS+H D * G LRS  K    AIH
Subject   3819  SLGSKHNDQ*AGTLRSQSKGIP*AIH  3896

Grapevine virus A isolate GTG11 1, complete genome

Sequence ID: DQ855084.2 Length: 7351 Number of Matches: 7

Range 1: 3522 to 3959 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
282.4 bits(619) 0.0 136/146(93%) 0/146(0%) Minus/Plus
Query        2  GIHVTPVLKKHLITNAKSTLLKKVLKGETYRRSEIVAMVRKHIPETTVLFEESRLAETVDYEARLAGDPYLKSLLALYXXXXXXXXXXXEPVALEPTRTHLALSTKINELAPFDLKAKEDREQYTEAGRTEQIDEEGYQGEAGNPM  439
                GIHVTP LKKHLITNAKSTLLKKVLKGETYRRSEIV+MVRKHIP+TTVLFEESRLAETVDYEARLAGDPYLKSLLALYDEIEMEDVEIEEPVALEPT+THLALS K NELAPFDLKAKE REQYT+AGRTEQIDEEGYQGE G+PM
Subject   3522  GIHVTPALKKHLITNAKSTLLKKVLKGETYRRSEIVSMVRKHIPDTTVLFEESRLAETVDYEARLAGDPYLKSLLALYDEIEMEDVEIEEPVALEPTKTHLALSAKNNELAPFDLKAKEYREQYTDAGRTEQIDEEGYQGETGDPM  3959

Range 2: 3522 to 3959 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
198.6 bits(427) 0.0 88/146(60%) 0/146(0%) Plus/Minus
Query        2  HGVTCFALIPLFIYLLCPPRLGVLLPVLFCLKIEGRQLINLGAQSQMSSCGFECHRLFYFHVLHLDFIIKSQKRFEIRITG*SCLVVHCLGQPTLFEQHSGLWYVLSNHCHYF*SPVRLPLEHFLQQCALCVGNQMLFQYRSHMYP  439
                HGV CFALIP  IYLL  P +GVLLPVLF L+IE  +LI L AQ  M  CGFE   LF F++LH D +I+  + FEIRITG SCL+VHCL     F+ HSG+WYVL +H + F*S V L LEHFLQQCALC+ +QML Q  S +YP
Subject   3522  HGVACFALIPFLIYLLSSPGIGVLLPVLFRLEIERCELIVLCAQG*MGLCGFERDWLFDFYILHFDLVIQG*EGFEIRITGQSCLIVHCLC*SAFFK*HSGIWYVLPDH*YDF*SSVSLTLEHFLQQCALCICDQMLLQCWSDVYP  3959

Range 3: 3523 to 3960 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
163.3 bits(350) 0.0 84/146(58%) 0/146(0%) Minus/Plus
Query        1  GYM*LLY*KSI*LPTQRAHC*RKCSRGRRTGDQK*WQWFESTYQRPLCCSKRVGWPRQWTTRQD*PVILISNLFWLFMMKSRWRTWK*KSRWHSNPHELIWL*APRLMSWRPSILRQKRTGSNTPRRGGQSK*MKRGIKAKQVTP*  438
                GY  L +*+SI*   QRAHC*RKCSR R T DQK +QW  STYQ PLC  K+    RQWT RQD PVI ISN     M +S+WR  K KS+  SNP   I  *A R MS   SI R+K TGSNTP  G  S+*M++GI+AKQ TP*
Subject   3523  GYTSLQH*RSI*SQMQRAHC*RKCSRVRLTEDQKSYQWSGSTYQIPLCYLKKAD*QRQWTMRQDWPVIRISNPS*PCMTRSKWRM*KSKSQSRSNPQRPI*P*AQRTMSSHLSISRRKSTGSNTPMPGELSR*MRKGIRAKQATP*  3960

Range 4: 3524 to 3652 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.3 bits(193) 0.0 39/43(91%) 0/43(0%) Plus/Minus
Query      309  GMCFRTIATISDLLYVSPLSTFFSSVLFALVIRCFFSTGVTCI  437
                GMCFRTI TISDLL VSPLSTFFSSVLFA VIRCFFS GVTCI
Subject   3524  GMCFRTIDTISDLL*VSPLSTFFSSVLFAFVIRCFFSAGVTCI  3652

Range 5: 3809 to 3958 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
87.7 bits(185) 0.0 40/50(80%) 0/50(0%) Plus/Minus
Query        3  MGLPASP*YPSSSICSVRPASVYCSLSSFALRSKGANSLILVLRAK*VRV  152
                MG P SP*YPSSSICSVRPASVYCS  SFALRSKGA+SL   LRAK V V
Subject   3809  MGSPVSP*YPSSSICSVRPASVYCSRYSFALRSKGASSLFFALRAKWVFV  3958

Range 6: 3523 to 3960 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
150.9 bits(323) 0.0 83/146(57%) 0/146(0%) Plus/Minus
Query        1  SWGYLLRLDTPLHLFALSAPPRCIAPCPLLP*DRRAPTH*SWCSEPNEFVWVRVPPALLFPRPPSRFHHKEPEEI*DKDHRLVLPRSPLSRPAYSLRTAQWSLVCAFEPLPLFLISCTSPP*ALSSAVCSLRW*SDAFSVQESHVS  438
                SWG L R DT  HL A  A  RCIAP  L P*DR+   H S  S  N  +WVR   AL F  PP R  H     I*D DHR VLP SPLS     L+ AQW LVCA  PL  FLI C S P*ALSSAVCSL  *SDA SV E  VS
Subject   3523  SWGRLFRPDTLPHLSAQFARHRCIAPGTLSP*DRKVRAHCSLRSGLNGSLWVRARLALRFLHPPFRSRHTRLGGI*DTDHRPVLPHSPLSLLVCFLQIAQWYLVCASGPLIRFLIFCKSHP*ALSSAVCSLHL*SDASSVLE*RVS  3960

Range 7: 3524 to 3715 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
94.5 bits(200) 0.0 42/64(66%) 0/64(0%) Minus/Plus
Query      246  DTCDSCTEKASDYQRKEHTAEESAQGGDVQEIRNSGNGSKAHTRDHCAVRRE*AGRDSGLRGKT  437
                DT  S TE+ASD++ KEHTAEESAQG D+Q+IRN  NG +AHTR HCA+ R+   RDSGL GKT
Subject   3524  DTRHSSTEEASDHKCKEHTAEESAQG*DLQKIRNRINGPEAHTRYHCAI*RKQTSRDSGL*GKT  3715

Grapevine virus A isolate TRAJ2 BR replicase protein, putative 19 kDa protein, movement protein, coat protein, and RNA binding protein genes, complete cds

Sequence ID: KX828703.1 Length: 7161 Number of Matches: 8

Range 1: 3338 to 3775 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
282.0 bits(618) 0.0 135/146(92%) 0/146(0%) Minus/Plus
Query        2  GIHVTPVLKKHLITNAKSTLLKKVLKGETYRRSEIVAMVRKHIPETTVLFEESRLAETVDYEARLAGDPYLKSLLALYXXXXXXXXXXXEPVALEPTRTHLALSTKINELAPFDLKAKEDREQYTEAGRTEQIDEEGYQGEAGNPM  439
                GIHVTP LKKHLITNAKSTLLKKVLKGETYRRSEIVAMVRKHIP+TTVLFEESRLAETVDYEARLAGDPYLKSLLALYDEIEMEDVE+EEPVALEPT+THLALSTK+NE APFDLKAKE REQ TEAGRTEQID+EGY GEAG+PM
Subject   3338  GIHVTPALKKHLITNAKSTLLKKVLKGETYRRSEIVAMVRKHIPDTTVLFEESRLAETVDYEARLAGDPYLKSLLALYDEIEMEDVEVEEPVALEPTKTHLALSTKMNEFAPFDLKAKEYREQQTEAGRTEQIDDEGYSGEAGDPM  3775

Range 2: 3338 to 3775 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
203.6 bits(438) 0.0 86/146(59%) 0/146(0%) Plus/Minus
Query        2  HGVTCFALIPLFIYLLCPPRLGVLLPVLFCLKIEGRQLINLGAQSQMSSCGFECHRLFYFHVLHLDFIIKSQKRFEIRITG*SCLVVHCLGQPTLFEQHSGLWYVLSNHCHYF*SPVRLPLEHFLQQCALCVGNQMLFQYRSHMYP  439
                H V+C A IP  I LLC P LG+LLPV FC +IEG +LI+LGAQSQM   GF+ +R F F+VLHL FII+S +RFEI I G SCL+VH   Q TL + H G+ YVLSNHCH   S V    E+FLQQC LC+G+Q+L Q R +MYP
Subject   3338  HRVSCLATIPFIIDLLCSPCLGLLLPVFFCFEIEGCELIHLGAQSQMGFRGFQSYRFFDFYVLHLYFIIQS*ERFEIGIAGQSCLIVHRFSQSTLLK*HGGVRYVLSNHCHNLRSSVSFTFEYFLQQCTLCIGDQVLLQCRGYMYP  3775

Range 3: 3339 to 3770 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
177.9 bits(382) 0.0 83/144(58%) 0/144(0%) Minus/Plus
Query        7  GYM*LLY*KSI*LPTQRAHC*RKCSRGRRTGDQK*WQWFESTYQRPLCCSKRVGWPRQWTTRQD*PVILISNLFWLFMMKSRWRTWK*KSRWHSNPHELIWL*APRLMSWRPSILRQKRTGSNTPRRGGQSK*MKRGIKAKQVT  438
                GYM*  +*+S * P QR HC*RK S+ + T D++ WQW ESTY+ P C  +RV W ++WT RQD P I ISNL  L MMK RWRT K K+R   NP + IWL*APR MS  PSI +QK TGSN PR+G QS+ M +GI A+Q T
Subject   3339  GYM*PRH*RST*SPMQRVHC*RKYSKVKLTEDRRLWQWLESTYRTPPCYLRRVDWLKRWTMRQDWPAIPISNLS*LCMMK*RWRT*KSKNR*LWNPRKPIWL*APR*MSSHPSISKQKNTGSNKPRQGEQSRSMMKGIVARQET  3770

Range 4: 3339 to 3770 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
156.9 bits(336) 0.0 81/144(56%) 0/144(0%) Plus/Minus
Query        7  GYLLRLDTPLHLFALSAPPRCIAPCPLLP*DRRAPTH*SWCSEPNEFVWVRVPPALLFPRPPSRFHHKEPEEI*DKDHRLVLPRSPLSRPAYSLRTAQWSLVCAFEPLPLFLISCTSPP*ALSSAVCSLRW*SDAFSVQESHVS  438
                G L R  T  H  AL A PR +AP  LL *DRR  TH SWCSEPN F WV   P L   RPPS FHH E  EI*D+D R +LP SP  +P YS + A+W  VCAF PLP   I C    * LSSAV SL W*S A SV   HVS
Subject   3339  GLLPRHYTLHHRSALFALPRFVAPGILLL*DRRVRTHSSWCSEPNGFSWVPELPVLRLLRPPSLFHHTELGEI*DRDRRPILPHSPPFQPVYSPQIARWCPVCAF*PLPQSPIFCKFHL*VLSSAVYSLHW*SGASSVPGLHVS  3770

Range 5: 3340 to 3468 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.7 bits(196) 0.0 40/43(93%) 0/43(0%) Plus/Minus
Query      309  GMCFRTIATISDLLYVSPLSTFFSSVLFALVIRCFFSTGVTCI  437
                GMCF TIATISDLL VSPLSTFFSSVLFALVIRCFFS GVTCI
Subject   3340  GMCFLTIATISDLL*VSPLSTFFSSVLFALVIRCFFSAGVTCI  3468

Range 6: 3625 to 3774 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
87.2 bits(184) 0.0 41/50(82%) 0/50(0%) Plus/Minus
Query        3  MGLPASP*YPSSSICSVRPASVYCSLSSFALRSKGANSLILVLRAK*VRV  152
                +G PASP YPSSSICSVRPASV CS  SFALRSKGANS ILVLRAK V V
Subject   3625  IGSPASPLYPSSSICSVRPASVCCSRYSFALRSKGANSFILVLRAKWVFV  3774

Range 7: 3340 to 3528 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.6 bits(150) 0.0 34/63(54%) 0/63(0%) Minus/Plus
Query      249  DTCDSCTEKASDYQRKEHTAEESAQGGDVQEIRNSGNGSKAHTRDHCAVRRE*AGRDSGLRGK  437
                DTC+  TE+A D+Q KE+TAEES Q  ++Q+I + GNG KAHT  H A+  E* G + GL GK
Subject   3340  DTCNPGTEEAPDHQCKEYTAEESTQR*NLQKIGDCGNG*KAHTGHHRAI*GE*TG*NGGL*GK  3528

Range 8: 3637 to 3705 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.8 bits(63) 0.0 16/23(70%) 0/23(0%) Minus/Plus
Query       72  FGSEHQD**VGALRS*GKRGQGA  140
                FGSEHQD *V  LRS  KR  GA
Subject   3637  FGSEHQDE*VRTLRSQSKRIPGA  3705

Grapevine virus A genomic RNA, MP and CP genes

Sequence ID: X75433.2 Length: 7351 Number of Matches: 8

Range 1: 3522 to 3959 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
281.1 bits(616) 0.0 135/146(92%) 0/146(0%) Minus/Plus
Query        2  GIHVTPVLKKHLITNAKSTLLKKVLKGETYRRSEIVAMVRKHIPETTVLFEESRLAETVDYEARLAGDPYLKSLLALYXXXXXXXXXXXEPVALEPTRTHLALSTKINELAPFDLKAKEDREQYTEAGRTEQIDEEGYQGEAGNPM  439
                GIHVTP LKK LITNAKSTLLKKVLKGETYRRSEIVAMVRKHIPETTVLFEESRLAETVDYEARLAGDPYLKSLLALYDEIEMED+EIEEPV LEPT+THLALSTK+NELAPFDLKAKE REQ+TEAGRTEQIDE GYQGE G+PM
Subject   3522  GIHVTPALKKKLITNAKSTLLKKVLKGETYRRSEIVAMVRKHIPETTVLFEESRLAETVDYEARLAGDPYLKSLLALYDEIEMEDIEIEEPVTLEPTKTHLALSTKMNELAPFDLKAKEHREQHTEAGRTEQIDENGYQGEVGDPM  3959

Range 2: 3525 to 3959 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
189.4 bits(407) 0.0 76/145(52%) 0/145(0%) Plus/Minus
Query        2  HGVTCFALIPLFIYLLCPPRLGVLLPVLFCLKIEGRQLINLGAQSQMSSCGFECHRLFYFHVLHLDFIIKSQKRFEIRITG*SCLVVHCLGQPTLFEQHSGLWYVLSNHCHYF*SPVRLPLEHFLQQCALCVGNQMLFQYRSHMY  436
                HGVT F+L+P+ +YL  PP L VLLPVLFC +++  +L++L AQ  M   G ECHRL Y +VLHL  +++ QK F++ +     LVVH LGQ    +QH GLWYVLS+HCHY  S V   LE+FLQQCA  +G+Q L Q R +MY
Subject   3525  HGVTHFSLVPILVYLFGPPCLCVLLPVLFCFEVKWCKLVHLCAQG*MGLGGLECHRLLYLYVLHLYLVVQGQKGFKVGVASQPSLVVHRLGQSAFLKQHCGLWYVLSDHCHYLRSSVGFALEYFLQQCAFSIGDQFLLQSRGYMY  3959

Range 3: 3526 to 3708 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
94.1 bits(199) 0.0 37/61(61%) 0/61(0%) Minus/Plus
Query      253  YM*LLY*KSI*LPTQRAHC*RKCSRGRRTGDQK*WQWFESTYQRPLCCSKRVGWPRQWTTR  435
                YM* L *+  * P  +AHC*RK SR + T D++*WQW ESTYQRP CC ++  WPR+WTTR
Subject   3526  YM*PLL*RRN*SPMLKAHC*RKYSRAKPTEDRR*WQWSESTYQRPQCCLRKADWPRRWTTR  3708

Range 4: 3736 to 3960 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
65.7 bits(137) 0.0 35/75(47%) 0/75(0%) Minus/Plus
Query        1  NLFWLFMMKSRWRTWK*KSRWHSNPHELIWL*APRLMSWRPSILRQKRTGSNTPRRGGQSK*MKRGIKAKQVTP*  225
                N FW    + RWRT +*+SR HS+P   I  *A R  S      +QK TGSNT R+GG ++* + G + K VTP*
Subject   3736  NPFWPCTTR*RWRT*R*RSR*HSSPPRPI*P*AQR*TSLHHLTSKQKSTGSNTQRQGGPNR*TRMGTREKWVTP*  3960

Range 5: 3524 to 3652 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
81.7 bits(172) 0.0 36/43(84%) 0/43(0%) Plus/Minus
Query      309  GMCFRTIATISDLLYVSPLSTFFSSVLFALVIRCFFSTGVTCI  437
                GMCFRTIATISDLL VSPLSTFFSSVL ALVI  FF  GVTC+
Subject   3524  GMCFRTIATISDLL*VSPLSTFFSSVLLALVISFFFRAGVTCM  3652

Range 6: 3809 to 3958 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.0 bits(166) 0.0 37/50(74%) 0/50(0%) Plus/Minus
Query        3  MGLPASP*YPSSSICSVRPASVYCSLSSFALRSKGANSLILVLRAK*VRV  152
                MG P SP YP SSICSVRPASV CS  SFALRS GA+S I VLRAK V V
Subject   3809  MGSPTSPWYPFSSICSVRPASVCCSRCSFALRSNGASSFIFVLRAKWVLV  3958

Range 7: 3526 to 3960 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
121.1 bits(258) 0.0 69/145(48%) 0/145(0%) Plus/Minus
Query        1  SWGYLLRLDTPLHLFALSAPPRCIAPCPLLP*DRRAPTH*SWCSEPNEFVWVRVPPALLFPRPPSRFHHKEPEEI*DKDHRLVLPRSPLSRPAYSLRTAQWSLVCAFEPLPLFLISCTSPP*ALSSAVCSLRW*SDAFSVQESHV  435
                SWG+ L   T   L   SA P C+AP  LL * +      S CS  N   W RV PA L   PPS      PE I* +  +   PRSP SRP    +TA WSLVCAF PLPL  I C   P* LSSAVC   W*S + S Q  HV
Subject   3526  SWGHPLLPGTHSRLSVRSALPLCVAPGALLL*GQMVQARSSLCSGLNGSWWARVSPAPLSLCPPSLSRRTGPEGI*GRGRQPA*PRSPPSRPVCFPQTALWSLVCAFGPLPLSPIFCRFRP*VLSSAVCF*HW*SVSSSEQGLHV  3960

Range 8: 3527 to 3709 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
88.1 bits(186) 0.0 36/61(59%) 0/61(0%) Minus/Plus
Query      252  TCDSCTEKASDYQRKEHTAEESAQGGDVQEIRNSGNGSKAHTRDHCAVRRE*AGRDSGLRG  434
                TC+ C+E+ +D+Q  +HTAEES QG ++Q+I +SGNG KAHTRDH AV  +  GRD GLRG
Subject   3527  TCNPCSEEETDHQC*KHTAEESTQGRNLQKIGDSGNGPKAHTRDHSAV*GKQTGRDGGLRG  3709

Grapevine virus A, complete genome

Sequence ID: NC_003604.2 Length: 7351 Number of Matches: 8

Range 1: 3522 to 3959 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
281.1 bits(616) 0.0 135/146(92%) 0/146(0%) Minus/Plus
Query        2  GIHVTPVLKKHLITNAKSTLLKKVLKGETYRRSEIVAMVRKHIPETTVLFEESRLAETVDYEARLAGDPYLKSLLALYXXXXXXXXXXXEPVALEPTRTHLALSTKINELAPFDLKAKEDREQYTEAGRTEQIDEEGYQGEAGNPM  439
                GIHVTP LKK LITNAKSTLLKKVLKGETYRRSEIVAMVRKHIPETTVLFEESRLAETVDYEARLAGDPYLKSLLALYDEIEMED+EIEEPV LEPT+THLALSTK+NELAPFDLKAKE REQ+TEAGRTEQIDE GYQGE G+PM
Subject   3522  GIHVTPALKKKLITNAKSTLLKKVLKGETYRRSEIVAMVRKHIPETTVLFEESRLAETVDYEARLAGDPYLKSLLALYDEIEMEDIEIEEPVTLEPTKTHLALSTKMNELAPFDLKAKEHREQHTEAGRTEQIDENGYQGEVGDPM  3959

Range 2: 3525 to 3959 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
189.4 bits(407) 0.0 76/145(52%) 0/145(0%) Plus/Minus
Query        2  HGVTCFALIPLFIYLLCPPRLGVLLPVLFCLKIEGRQLINLGAQSQMSSCGFECHRLFYFHVLHLDFIIKSQKRFEIRITG*SCLVVHCLGQPTLFEQHSGLWYVLSNHCHYF*SPVRLPLEHFLQQCALCVGNQMLFQYRSHMY  436
                HGVT F+L+P+ +YL  PP L VLLPVLFC +++  +L++L AQ  M   G ECHRL Y +VLHL  +++ QK F++ +     LVVH LGQ    +QH GLWYVLS+HCHY  S V   LE+FLQQCA  +G+Q L Q R +MY
Subject   3525  HGVTHFSLVPILVYLFGPPCLCVLLPVLFCFEVKWCKLVHLCAQG*MGLGGLECHRLLYLYVLHLYLVVQGQKGFKVGVASQPSLVVHRLGQSAFLKQHCGLWYVLSDHCHYLRSSVGFALEYFLQQCAFSIGDQFLLQSRGYMY  3959

Range 3: 3526 to 3708 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
94.1 bits(199) 0.0 37/61(61%) 0/61(0%) Minus/Plus
Query      253  YM*LLY*KSI*LPTQRAHC*RKCSRGRRTGDQK*WQWFESTYQRPLCCSKRVGWPRQWTTR  435
                YM* L *+  * P  +AHC*RK SR + T D++*WQW ESTYQRP CC ++  WPR+WTTR
Subject   3526  YM*PLL*RRN*SPMLKAHC*RKYSRAKPTEDRR*WQWSESTYQRPQCCLRKADWPRRWTTR  3708

Range 4: 3736 to 3960 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
65.7 bits(137) 0.0 35/75(47%) 0/75(0%) Minus/Plus
Query        1  NLFWLFMMKSRWRTWK*KSRWHSNPHELIWL*APRLMSWRPSILRQKRTGSNTPRRGGQSK*MKRGIKAKQVTP*  225
                N FW    + RWRT +*+SR HS+P   I  *A R  S      +QK TGSNT R+GG ++* + G + K VTP*
Subject   3736  NPFWPCTTR*RWRT*R*RSR*HSSPPRPI*P*AQR*TSLHHLTSKQKSTGSNTQRQGGPNR*TRMGTREKWVTP*  3960

Range 5: 3524 to 3652 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
81.7 bits(172) 0.0 36/43(84%) 0/43(0%) Plus/Minus
Query      309  GMCFRTIATISDLLYVSPLSTFFSSVLFALVIRCFFSTGVTCI  437
                GMCFRTIATISDLL VSPLSTFFSSVL ALVI  FF  GVTC+
Subject   3524  GMCFRTIATISDLL*VSPLSTFFSSVLLALVISFFFRAGVTCM  3652

Range 6: 3809 to 3958 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.0 bits(166) 0.0 37/50(74%) 0/50(0%) Plus/Minus
Query        3  MGLPASP*YPSSSICSVRPASVYCSLSSFALRSKGANSLILVLRAK*VRV  152
                MG P SP YP SSICSVRPASV CS  SFALRS GA+S I VLRAK V V
Subject   3809  MGSPTSPWYPFSSICSVRPASVCCSRCSFALRSNGASSFIFVLRAKWVLV  3958

Range 7: 3526 to 3960 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
121.1 bits(258) 0.0 69/145(48%) 0/145(0%) Plus/Minus
Query        1  SWGYLLRLDTPLHLFALSAPPRCIAPCPLLP*DRRAPTH*SWCSEPNEFVWVRVPPALLFPRPPSRFHHKEPEEI*DKDHRLVLPRSPLSRPAYSLRTAQWSLVCAFEPLPLFLISCTSPP*ALSSAVCSLRW*SDAFSVQESHV  435
                SWG+ L   T   L   SA P C+AP  LL * +      S CS  N   W RV PA L   PPS      PE I* +  +   PRSP SRP    +TA WSLVCAF PLPL  I C   P* LSSAVC   W*S + S Q  HV
Subject   3526  SWGHPLLPGTHSRLSVRSALPLCVAPGALLL*GQMVQARSSLCSGLNGSWWARVSPAPLSLCPPSLSRRTGPEGI*GRGRQPA*PRSPPSRPVCFPQTALWSLVCAFGPLPLSPIFCRFRP*VLSSAVCF*HW*SVSSSEQGLHV  3960

Range 8: 3527 to 3709 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
88.1 bits(186) 0.0 36/61(59%) 0/61(0%) Minus/Plus
Query      252  TCDSCTEKASDYQRKEHTAEESAQGGDVQEIRNSGNGSKAHTRDHCAVRRE*AGRDSGLRG  434
                TC+ C+E+ +D+Q  +HTAEES QG ++Q+I +SGNG KAHTRDH AV  +  GRD GLRG
Subject   3527  TCNPCSEEETDHQC*KHTAEESTQGRNLQKIGDSGNGPKAHTRDHSAV*GKQTGRDGGLRG  3709