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Queries

Nucleotide Sequence (725 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
73
146
219
292
365
438
511
584
657
725

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
496.1 496.1 33% 5.469e-158 99% ADI49412

Alignments

methyl transferase/helicase [Grapevine leafroll-associated virus 3]

Sequence ID: gb|ADI49412.1| Length: 2237 Number of Matches: 1

Range 1: 641 to 881 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
496.1 bits(1276) 0.0 239/241(99%) 0/241(0%) Plus/Plus
Query        2  KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEFGVGAVRSQKTHVITGSRVVHSKVDISPDDMWGLVVAVMAQAIKDRAKSIRSYNFIKASEGSLAGVFKLFFQTVGDCFSSVVSTYAKAMVHDNFNVLETLISMPKAFICKVPGSV  724
                KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFE+ VGAVRSQKTHVITGSRVVHSKVDISPDDMWGLVVAVMAQAIKDRAKSIRSYNFIKASEGSLAGVFKLFFQTVGDCFSSVVSTYAKAMVHDNFNVLETLISMPKAFICKVPGSV
Subject    641  KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAVRSQKTHVITGSRVVHSKVDISPDDMWGLVVAVMAQAIKDRAKSIRSYNFIKASEGSLAGVFKLFFQTVGDCFSSVVSTYAKAMVHDNFNVLETLISMPKAFICKVPGSV  881

Nucleotide Sequence (566 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
57
114
171
228
285
342
399
456
513
566

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
340.5 340.5 29% 9.418e-112 99% AOS89870

Alignments

HSP90h [Grapevine leafroll-associated virus 3]

Sequence ID: gb|AOS89870.1| Length: 483 Number of Matches: 1

Range 1: 312 to 476 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
340.5 bits(872) 0.0 163/165(99%) 0/165(0%) Plus/Plus
Query        1  EMTTGKGGKICPEIAEKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGKVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNENQATG  495
                EMTTGKGGKICPEIAEKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKG+VEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNENQ TG
Subject    312  EMTTGKGGKICPEIAEKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGRVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNENQVTG  476

Nucleotide Sequence (752 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
76
152
228
304
380
456
532
608
684
752

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
238.8 238.8 16% 4.559e-75 100% AFM43649

Alignments

19.7 kDa protein [Grapevine leafroll-associated virus 3]

Sequence ID: gb|AFM43649.1| Length: 179 Number of Matches: 1

See 1 more title(s)

Range 1: 63 to 179 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
238.8 bits(608) 0.0 117/117(100%) 0/117(0%) Minus/Plus
Query      401  LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKKYLGYLSDQCSGKRIMLTQTGLTAVEEADILRTNYLVSGNGYISNCGIARMLILTLCCGAL  751
                LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKKYLGYLSDQCSGKRIMLTQTGLTAVEEADILRTNYLVSGNGYISNCGIARMLILTLCCGAL
Subject     63  LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKKYLGYLSDQCSGKRIMLTQTGLTAVEEADILRTNYLVSGNGYISNCGIARMLILTLCCGAL  179

Nucleotide Sequence (435 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
44
88
132
176
220
264
308
352
396
435

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
156.8 156.8 18% 1.175e-44 98% ADQ57471

Alignments

19.6 kDa protein [Grapevine leafroll-associated virus 3]

Sequence ID: gb|ADQ57471.1| Length: 177 Number of Matches: 1

See 12 more title(s)

Range 1: 18 to 97 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
156.8 bits(395) 0.0 78/80(98%) 0/80(0%) Minus/Plus
Query        7  KTNDHLVLILIKEALINYYNASFTDESAVLSDFRESIGNFLIARCSSQNSCRVMKALITNIVCKVTIETARSFIGDLILV  246
                KTNDHLVLILIKEALINYYNASFTDESAVLSD RESIGNFLIARCSSQNSCRVMKALITNIVCK TIETARSFIGDLILV
Subject     18  KTNDHLVLILIKEALINYYNASFTDESAVLSDSRESIGNFLIARCSSQNSCRVMKALITNIVCKATIETARSFIGDLILV  97

Nucleotide Sequence (334 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
34
68
102
136
170
204
238
272
306
334

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
217.2 217.2 33% 2.002e-66 99% AMD11664

Alignments

heat shock protein 70-like protein, partial [Grapevine leafroll-associated virus 3]

Sequence ID: gb|AMD11664.1| Length: 379 Number of Matches: 1

Range 1: 77 to 186 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
217.2 bits(552) 0.0 109/110(99%) 0/110(0%) Minus/Plus
Query        3  GVVNEPTAAALYSLAKSRVEDLLLAVFDFGGGAFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKVSDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG  332
                GVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG FDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKVSDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG
Subject     77  GVVNEPTAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKVSDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG  186

Nucleotide Sequence (1118 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
112
224
336
448
560
672
784
896
1008
1118

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
771.5 771.5 33% 0 99% AFV73379

Alignments

245 kDa polyprotein [Grapevine leafroll-associated virus 3]

Sequence ID: gb|AFV73379.1| Length: 2237 Number of Matches: 1

Range 1: 301 to 672 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
771.5 bits(1991) 0.0 367/372(99%) 0/372(0%) Minus/Plus
Query        3  RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSVGFLMRMGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPNVPKTAIVAGDRTRLGGEILASVANALNQEEVYSSVVSSITNRLVLRDQSALLSHLDTKLCDMFSQRDAMIREKPSHRCDVFLKPQEKERLRELFPELSIQFSESVRSSHPSANAMRSCFNGIFSRRCGGVCFFDIGGSFTYHVKAGHVNCHVCNPVLDVKDVKRRINEILFLSTAGGDSYVSSDLLTEAASKSVSYCSRESQNCDSRADAGFMVDVYDISPQQVAEAMDKKGALVFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFS  1118
                RAFV TT+GWCWFNNERLRGEIYRRRCFSSSFSVGFLM MGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPNVPKTAIVAGDRTRLGGEILASVANALNQEEVYSSVVSSITNRLVLRDQSALLSHLDTKLCDMFSQRDAMIREKPSHRCDVFLKPQEKERLRELFPELSIQFS+SVRSSHP ANAMRSCFNGIFSRRCGGVCFFDIGGSFTYHVKAGHVNCHVCNPVLDVKDVKRRINEILFLSTAGGDSYVSSDLLTEAASKSVSYCSRESQNCDSRADAGFMVDVYDISPQQVAEAMDKKGALVFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFS
Subject    301  RAFVCTTRGWCWFNNERLRGEIYRRRCFSSSFSVGFLMHMGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPNVPKTAIVAGDRTRLGGEILASVANALNQEEVYSSVVSSITNRLVLRDQSALLSHLDTKLCDMFSQRDAMIREKPSHRCDVFLKPQEKERLRELFPELSIQFSDSVRSSHPFANAMRSCFNGIFSRRCGGVCFFDIGGSFTYHVKAGHVNCHVCNPVLDVKDVKRRINEILFLSTAGGDSYVSSDLLTEAASKSVSYCSRESQNCDSRADAGFMVDVYDISPQQVAEAMDKKGALVFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFS  672

Nucleotide Sequence (119 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
12
24
36
48
60
72
84
96
108
119

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
62.8 62.8 27% 1.571e-10 97% ACA51534

Alignments

19.6 kDa protein [Grapevine leafroll-associated virus 3]

Sequence ID: gb|ACA51534.1| Length: 177 Number of Matches: 1

Range 1: 140 to 171 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.8 bits(151) 0.0 31/32(97%) 0/32(0%) Plus/Plus
Query       23  ILSGENRGLGRVDSLKLVCVGRQGGGNVLQHL  118
                ILSGENRGLG VDSLKLVCVGRQGGGNVLQHL
Subject    140  ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHL  171

Nucleotide Sequence (132 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
14
28
42
56
70
84
98
112
126
132

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
71.6 71.6 29% 1.008e-13 97% ACA51534

Alignments

19.6 kDa protein [Grapevine leafroll-associated virus 3]

Sequence ID: gb|ACA51534.1| Length: 177 Number of Matches: 1

Range 1: 140 to 177 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.6 bits(174) 0.0 37/38(97%) 0/38(0%) Plus/Plus
Query        3  ILSGENRGLGRVDSLKLVCVGRQGGGNVLQHLLISSLG  116
                ILSGENRGLG VDSLKLVCVGRQGGGNVLQHLLISSLG
Subject    140  ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG  177

Nucleotide Sequence (218 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
22
44
66
88
110
132
154
176
198
218

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
118.6 118.6 28% 3.127e-31 97% CAE54445

Alignments

coat protein, partial [Grapevine leafroll-associated virus 3]

Sequence ID: emb|CAE54445.1| Length: 161 Number of Matches: 1

Range 1: 1 to 60 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.6 bits(296) 0.0 58/60(97%) 0/60(0%) Minus/Plus
Query       30  MAFELKLGQIYEVVPENNLRDREGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVF  209
                MAFELKLGQIYEVVPENNLR R GDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVF
Subject      1  MAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVF  60

Nucleotide Sequence (258 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
26
52
78
104
130
156
182
208
234
258

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
110.2 110.2 33% 5.231e-28 93% AEM60529

Alignments

coat protein, partial [Grapevine leafroll-associated virus 3]

Sequence ID: gb|AEM60529.1| Length: 142 Number of Matches: 1

Range 1: 1 to 85 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
110.2 bits(274) 0.0 79/85(93%) 0/85(0%) Plus/Plus
Query        2  EVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFXXXXXXXXXXXXXXXXXXXXXXXXXXDIGVVPESET  256
                EVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFATAALATAAQEP +QP  QVVEP E DIGVVPESET
Subject      1  EVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFATAALATAAQEPSKQPTTQVVEPPEADIGVVPESET  85

Nucleotide Sequence (449 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
45
90
135
180
225
270
315
360
405
449

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
272.3 272.3 30% 6.385e-86 100% AFV73384

Alignments

HSP90h [Grapevine leafroll-associated virus 3]

Sequence ID: gb|AFV73384.1| Length: 483 Number of Matches: 1

Range 1: 151 to 283 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
272.3 bits(695) 0.0 133/133(100%) 0/133(0%) Minus/Plus
Query        2  KYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGG  400
                KYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGG
Subject    151  KYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGG  283

Nucleotide Sequence (199 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
20
40
60
80
100
120
140
160
180
199

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
131.0 131.0 33% 1.435e-34 98% AMA01632

Alignments

RNA-dependent RNA polymerase, partial [Grapevine leafroll-associated virus 3]

Sequence ID: gb|AMA01632.1| Length: 317 Number of Matches: 1

Range 1: 232 to 296 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
131.0 bits(328) 0.0 64/65(98%) 0/65(0%) Minus/Plus
Query        3  SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSALSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF  197
                SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTS LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF
Subject    232  SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF  296

Nucleotide Sequence (1792 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
180
360
540
720
900
1080
1260
1440
1620
1792

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
250.4 250.4 8% 9.945e-67 87% AIT52509

Alignments

methyl transferase/helicase [Grapevine leafroll-associated virus 3]

Sequence ID: gb|AIT52509.1| Length: 2237 Number of Matches: 1

Range 1: 6 to 152 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
250.4 bits(638) 0.0 128/147(87%) 3/147(2%) Minus/Plus
Query      655  VLRQFSFPHVNSTLEFYRFNKGNSDVNKFIVNLKPAGGAKVVDFSPKCAAYVYIGKLTQGVKRVFAPSPVNGYTRQFALVSGNGVAVRADGEKVKLVARSNSSDVSDSTNQAVTFEAVSHSPGCLSYYKS---*IPLLRSSRRAICE  1086
                VLRQFSFPHVNSTLEFYRFNKGNSDVNKFIVNLKPAGGAKVVDFSPKCAAYVYIGKLTQGVKRVFAPSPVNGYTRQFALVSGNGVAVRADGEKVKLVARSNSSDVSDSTNQAVTFEAVSHS   + YY++     P +R + RA  E
Subject      6  VLRQFSFPHVNSTLEFYRFNKGNSDVNKFIVNLKPAGGAKVVDFSPKCAAYVYIGKLTQGVKRVFAPSPVNGYTRQFALVSGNGVAVRADGEKVKLVARSNSSDVSDSTNQAVTFEAVSHSLLVVHYYRTTPFVKPTVREAVRAAPE  152

Nucleotide Sequence (657 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
66
132
198
264
330
396
462
528
594
657

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
342.0 434.5 35% 6.566e-112 80% ADQ57588

Alignments

divergent coat protein [Grapevine leafroll-associated virus 3]

Sequence ID: gb|ADQ57588.1| Length: 477 Number of Matches: 2

Range 1: 50 to 225 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
342.0 bits(876) 0.0 163/176(93%) 0/176(0%) Plus/Plus
Query        2  HRADFPGTQSLSVTLSIASNKLASGLMGNDAESSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKYLGGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFFKGFNKISLKKT  529
                 RADFPGTQSLSVTLS+ASNKLASGLMG+DA SSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKY+GGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFF+      LKK+
Subject     50  QRADFPGTQSLSVTLSVASNKLASGLMGSDAVSSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKYIGGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFFRDILLKPLKKS  225

Range 2: 169 to 224 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.4 bits(228) 0.0 45/56(80%) 0/56(0%) Minus/Plus
Query      490  KYWTCIYKLTQLVSVDRMLCIGCFSVSKLGVMRIRSLLVSPVRVFFRDILLKPLKK  657
                K WT IYK+T++VSVD+ L  GCFS SKLGVMRIRSLLVSPVR+FFRDILLKPLKK
Subject    169  KNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFFRDILLKPLKK  224

Nucleotide Sequence (192 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
20
40
60
80
100
120
140
160
180
192

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
129.0 129.0 33% 6.574e-34 100% AMA01632

Alignments

RNA-dependent RNA polymerase, partial [Grapevine leafroll-associated virus 3]

Sequence ID: gb|AMA01632.1| Length: 317 Number of Matches: 1

Range 1: 234 to 296 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
129.0 bits(323) 0.0 63/63(100%) 0/63(0%) Plus/Plus
Query        2  VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF  190
                VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF
Subject    234  VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF  296

Nucleotide Sequence (566 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
57
114
171
228
285
342
399
456
513
566

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
389.0 389.0 33% 7.835e-131 100% ADQ57630

Alignments

divergent coat protein [Grapevine leafroll-associated virus 3]

Sequence ID: gb|ADQ57630.1| Length: 477 Number of Matches: 1

Range 1: 254 to 441 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
389.0 bits(998) 0.0 188/188(100%) 0/188(0%) Minus/Plus
Query        2  GVGPSEQLDVVALTSDVTELINTRGQGKICFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRY  565
                GVGPSEQLDVVALTSDVTELINTRGQGKICFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRY
Subject    254  GVGPSEQLDVVALTSDVTELINTRGQGKICFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRY  441

Nucleotide Sequence (315 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
32
64
96
128
160
192
224
256
288
315

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
207.6 207.6 33% 9.609e-63 100% AMD11652

Alignments

heat shock protein 70-like protein, partial [Grapevine leafroll-associated virus 3]

Sequence ID: gb|AMD11652.1| Length: 379 Number of Matches: 1

See 22 more title(s)

Range 1: 83 to 186 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
207.6 bits(527) 0.0 104/104(100%) 0/104(0%) Plus/Plus
Query        2  TAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG  313
                TAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG
Subject     83  TAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG  186

Nucleotide Sequence (878 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
88
176
264
352
440
528
616
704
792
878

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
406.4 406.4 23% 3.171e-138 100% AGG08743

Alignments

coat protein [Grapevine leafroll-associated virus 3]

Sequence ID: gb|AGG08743.1| Length: 313 Number of Matches: 1

Range 1: 109 to 313 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
406.4 bits(1043) 0.0 205/205(100%) 0/205(0%) Minus/Plus
Query      250  DKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADDAATKTKFFLYVMQIACXXXXXXXXXFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQLLQKK  864
                DKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADDAATKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQLLQKK
Subject    109  DKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADDAATKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQLLQKK  313

Nucleotide Sequence (316 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
32
64
96
128
160
192
224
256
288
316

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
154.5 154.5 33% 1.454e-44 100% AGO17635

Alignments

HSP70, partial [Grapevine leafroll-associated virus 3]

Sequence ID: gb|AGO17635.1| Length: 172 Number of Matches: 1

Range 1: 60 to 164 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
154.5 bits(389) 0.0 105/105(100%) 0/105(0%) Plus/Plus
Query        1  NPKRWVGVTRDNLERYVEKLKPTYTIKFDXXXXXXXXXXXXXPDTLLRVVDIICLFLRALVLECERQXXXXXXXXXXXXXXDYNSFKRSFVVQALKGLGIPVRGV  315
                NPKRWVGVTRDNLERYVEKLKPTYTIKFDSGGALLMGGLGSGPDTLLRVVDIICLFLRALVLECERQTSSTVSAAVVTVPADYNSFKRSFVVQALKGLGIPVRGV
Subject     60  NPKRWVGVTRDNLERYVEKLKPTYTIKFDSGGALLMGGLGSGPDTLLRVVDIICLFLRALVLECERQTSSTVSAAVVTVPADYNSFKRSFVVQALKGLGIPVRGV  164

Nucleotide Sequence (341 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
35
70
105
140
175
210
245
280
315
341

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
234.6 234.6 33% 7.559e-68 100% ADI49425

Alignments

methyl transferase/helicase [Grapevine leafroll-associated virus 3]

Sequence ID: gb|ADI49425.1| Length: 2237 Number of Matches: 1

Range 1: 2080 to 2192 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
234.6 bits(597) 0.0 113/113(100%) 0/113(0%) Plus/Plus
Query        1  LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFGDVVLFRTKKADDSLFTKQPHILVGLSRHT  339
                LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFGDVVLFRTKKADDSLFTKQPHILVGLSRHT
Subject   2080  LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFGDVVLFRTKKADDSLFTKQPHILVGLSRHT  2192

Nucleotide Sequence (1025 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
103
206
309
412
515
618
721
824
927
1025

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
242.3 242.3 11% 3.827e-75 100% ADM07414

Alignments

19.7 kDa protein [Grapevine leafroll-associated virus 3]

Sequence ID: gb|ADM07414.1| Length: 179 Number of Matches: 1

Range 1: 63 to 179 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
242.3 bits(617) 0.0 117/117(100%) 0/117(0%) Plus/Plus
Query        2  LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEGADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL  352
                LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEGADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL
Subject     63  LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEGADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL  179

Nucleotide Sequence (503 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
51
102
153
204
255
306
357
408
459
503

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
335.9 335.9 33% 1.953e-110 99% AIT52515

Alignments

divergent coat protein [Grapevine leafroll-associated virus 3]

Sequence ID: gb|AIT52515.1| Length: 477 Number of Matches: 1

Range 1: 81 to 245 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
335.9 bits(860) 0.0 164/165(99%) 0/165(0%) Minus/Plus
Query        9  VSSSFMLVNSVGDYFECGLCHNKPYVGREVVFARKYIGGRGIEVTTGKNYTSNNWNESSYVINVTIKNGIARTVVNSSYTQTDVTGLPKDFNRIYKITKIVSVDSNLYPGCFSASKLDVMNIRSVSIQGKTIYFRDVLLKPLKKSFLALRETALGIDDSSLLRSS  503
                VSSSFMLVNS GDYFECGLCHNKPYVGREVVFARKYIGGRGIEVTTGKNYTSNNWNESSYVINVTIKNGIARTVVNSSYTQTDVTGLPKDFNRIYKITKIVSVDSNLYPGCFSASKLDVMNIRSVSIQGKTIYFRDVLLKPLKKSFLALRETALGIDDSSLLRSS
Subject     81  VSSSFMLVNSEGDYFECGLCHNKPYVGREVVFARKYIGGRGIEVTTGKNYTSNNWNESSYVINVTIKNGIARTVVNSSYTQTDVTGLPKDFNRIYKITKIVSVDSNLYPGCFSASKLDVMNIRSVSIQGKTIYFRDVLLKPLKKSFLALRETALGIDDSSLLRSS  245

Nucleotide Sequence (686 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
69
138
207
276
345
414
483
552
621
686

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
115.2 115.2 8% 1.234e-27 98% AAV84355

Alignments

ORF1a, partial [Grapevine leafroll-associated virus 3]

Sequence ID: gb|AAV84355.2| Length: 171 Number of Matches: 1

Range 1: 1 to 54 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
115.2 bits(287) 0.0 53/54(98%) 0/54(0%) Minus/Plus
Query        2  MDYVRPLRVFSFPHVNNTLEYIRYNKANSDVGAFLTAMKFTGNVKLSDFTPKSA  163
                MDYVRPLRVFSFPHVNNTLEYIRYNKANSDVGAFLT+MKFTGNVKLSDFTPKSA
Subject      1  MDYVRPLRVFSFPHVNNTLEYIRYNKANSDVGAFLTSMKFTGNVKLSDFTPKSA  54

Nucleotide Sequence (673 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
68
136
204
272
340
408
476
544
612
673

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
105.5 105.5 8% 2.687e-25 100% ACA51527

Alignments

6 kDa protein [Grapevine leafroll-associated virus 3]

Sequence ID: gb|ACA51527.1| Length: 51 Number of Matches: 1

See 3 more title(s)

Range 1: 1 to 51 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
105.5 bits(262) 0.0 51/51(100%) 0/51(0%) Plus/Plus
Query      211  MYSRGFFFKSRVTLPTLVGAYMWEFELPYLTDKRHISYSAPSVATFSLVSR  363
                MYSRGFFFKSRVTLPTLVGAYMWEFELPYLTDKRHISYSAPSVATFSLVSR
Subject      1  MYSRGFFFKSRVTLPTLVGAYMWEFELPYLTDKRHISYSAPSVATFSLVSR  51

Nucleotide Sequence (507 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
51
102
153
204
255
306
357
408
459
507

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
285.8 285.8 27% 6.834e-95 100% AAB47603

Alignments

p20 protein [Grapevine leafroll-associated virus 3]

Sequence ID: gb|AAB47603.1| Length: 183 Number of Matches: 1

Range 1: 1 to 139 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
285.8 bits(730) 0.0 139/139(100%) 0/139(0%) Plus/Plus
Query       75  MDKYIYVTGILNPNEARDEVFSVVNKGYIGPGGRSFSNRGSKYTVVWENSAARISGFTSTSQSTIDAFAYFLLKGGLTTTLSNPINCENWVRSSKDLSAFFRTLIKGKIYASRSVDSNLPKKDRDDIMEASRRLSPSDA  491
                MDKYIYVTGILNPNEARDEVFSVVNKGYIGPGGRSFSNRGSKYTVVWENSAARISGFTSTSQSTIDAFAYFLLKGGLTTTLSNPINCENWVRSSKDLSAFFRTLIKGKIYASRSVDSNLPKKDRDDIMEASRRLSPSDA
Subject      1  MDKYIYVTGILNPNEARDEVFSVVNKGYIGPGGRSFSNRGSKYTVVWENSAARISGFTSTSQSTIDAFAYFLLKGGLTTTLSNPINCENWVRSSKDLSAFFRTLIKGKIYASRSVDSNLPKKDRDDIMEASRRLSPSDA  139

Nucleotide Sequence (355 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
36
72
108
144
180
216
252
288
324
355

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
225.3 225.3 33% 9.408e-68 94% ADI49416

Alignments

Hsp70-like protein [Grapevine leafroll-associated virus 3]

Sequence ID: gb|ADI49416.1| Length: 549 Number of Matches: 1

Range 1: 375 to 492 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
225.3 bits(573) 0.0 111/118(94%) 0/118(0%) Minus/Plus
Query        2  VDTLANTLTDGVVDFQPVVIFPKGSPIPCSYTHRCTVGGGDVVFGIFEGENNRAFLNEPTCRGVSKRRGDPVEADVAQFNLSTDGSVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR  355
                VDTL NTLTD VVDFQPVVIFPKGSPIPCSYTHR TVGGGDVV+GIFEGENNRAFLNEPT RGVSKRRGDPVE DVAQFNLSTDG+VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR
Subject    375  VDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR  492

Nucleotide Sequence (786 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
79
158
237
316
395
474
553
632
711
786

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
161.4 161.4 12% 7.53e-45 100% ADQ57678

Alignments

19.7 kDa protein [Grapevine leafroll-associated virus 3]

Sequence ID: gb|ADQ57678.1| Length: 179 Number of Matches: 1

See 4 more title(s)

Range 1: 1 to 94 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
161.4 bits(407) 0.0 94/94(100%) 0/94(0%) Minus/Plus
Query        3  MDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEXXXXXXXXXXXXXTELHRTILIDSIDSAFAYDQVGCLVGIARGLLKH  284
                MDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEVNVVKAYVATTATTELHRTILIDSIDSAFAYDQVGCLVGIARGLLKH
Subject      1  MDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEVNVVKAYVATTATTELHRTILIDSIDSAFAYDQVGCLVGIARGLLKH  94

Nucleotide Sequence (2006 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
201
402
603
804
1005
1206
1407
1608
1809
2006

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
1364.4 1364.4 33% 0 100% AFV73379

Alignments

245 kDa polyprotein [Grapevine leafroll-associated virus 3]

Sequence ID: gb|AFV73379.1| Length: 2237 Number of Matches: 1

Range 1: 1581 to 2237 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1364.4 bits(3530) 0.0 656/657(100%) 0/657(0%) Plus/Plus
Query        2  VSSGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGVTRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPYVFIAEKGIFTKGKDVDAVVALGDNLFVCDDILVFHDAINLIGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGLNSATTVNSRVVNFIVRGMYKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALSSKLDDKVGTYISDASPQSVSDALLHTFAPAGCFRGI  1972
                VSSGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQG TRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPYVFIAEKGIFTKGKDVDAVVALGDNLFVCDDILVFHDAINLIGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGLNSATTVNSRVVNFIVRGMYKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALSSKLDDKVGTYISDASPQSVSDALLHTFAPAGCFRGI
Subject   1581  VSSGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPYVFIAEKGIFTKGKDVDAVVALGDNLFVCDDILVFHDAINLIGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGLNSATTVNSRVVNFIVRGMYKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALSSKLDDKVGTYISDASPQSVSDALLHTFAPAGCFRGI  2237

Nucleotide Sequence (409 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
41
82
123
164
205
246
287
328
369
409

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
260.0 260.0 32% 2.18e-76 93% AFV73379

Alignments

245 kDa polyprotein [Grapevine leafroll-associated virus 3]

Sequence ID: gb|AFV73379.1| Length: 2237 Number of Matches: 1

Range 1: 1648 to 1778 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
260.0 bits(663) 0.0 122/131(93%) 0/131(0%) Minus/Plus
Query        1  RKGGKVMVMNVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQRAQSQGVTRSITVRSGGKALSEGSGWEVKGRSTYSIWCEQDYVKKCEWLRADNPVMAL  393
                RKGGKVMV+NVASGDYFLMPCGFQRTHLHSV+SIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQ+ QSQG TR+IT +SGGKALSEGSG EVKGRSTYSIWCEQDYVKKCEWLRADNPVMAL
Subject   1648  RKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMAL  1778

Nucleotide Sequence (627 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
63
126
189
252
315
378
441
504
567
627

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
410.6 410.6 32% 6.575e-138 99% AIT52512

Alignments

Hsp70-like protein [Grapevine leafroll-associated virus 3]

Sequence ID: gb|AIT52512.1| Length: 549 Number of Matches: 1

Range 1: 305 to 506 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
410.6 bits(1054) 0.0 200/202(99%) 0/202(0%) Plus/Plus
Query       22  WSTGLENFYPDPVVAVMTGGSSALSKVREDVANLPQVSKVIFDSSDFRCSVACGAKVYCDILSGSSNLRLVDTLTNTLTDEVSDFQPVVIFPKGSPIPCSYTHRYNVSGDEVVYGIFEGENNRAFLNEPTFRGMSKRRGEPKEMDIAVFKLSTDGTVSVIVNGEEVVNEYLVPGTTNILESLVYRSGREEVEAKAIPEYLKT  627
                +STGLENFYPDPVVAVMTGGSSALSKVREDVANLPQVSKVIFDSSDFRCSVACGAKVYCDILSGSSNLRLVDTLTNTLTDEVSDFQPVVIFPKGSPIPCSYTHRYNVSGDEVVYGIFEGENNRAFLNEPTFRGMSKRRGEPKEMDIAVFKLSTDGTVSVIVNGEEVVNEYLVPGTTNILESLVYRSGREE+EAKAIPEYLKT
Subject    305  FSTGLENFYPDPVVAVMTGGSSALSKVREDVANLPQVSKVIFDSSDFRCSVACGAKVYCDILSGSSNLRLVDTLTNTLTDEVSDFQPVVIFPKGSPIPCSYTHRYNVSGDEVVYGIFEGENNRAFLNEPTFRGMSKRRGEPKEMDIAVFKLSTDGTVSVIVNGEEVVNEYLVPGTTNILESLVYRSGREELEAKAIPEYLKT  506

Nucleotide Sequence (1057 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
106
212
318
424
530
636
742
848
954
1057

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
303.5 303.5 17% 5.447e-94 100% ACA51529

Alignments

HSP70h [Grapevine leafroll-associated virus 3]

Sequence ID: gb|ACA51529.1| Length: 549 Number of Matches: 1

Range 1: 1 to 175 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
303.5 bits(776) 0.0 175/175(100%) 0/175(0%) Minus/Plus
Query        3  MEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVETQIFIPEGSSTYLIGKAAGKAYRDGVEGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDXXXXXXXXXXXXGPDTLLRVVDVICLFLRALILECERYTSXXXXXXXXXVPADYNSFKRSFVVEALKGLGIPVRGVVNEP  527
                MEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVETQIFIPEGSSTYLIGKAAGKAYRDGVEGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEP
Subject      1  MEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVETQIFIPEGSSTYLIGKAAGKAYRDGVEGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEP  175

Nucleotide Sequence (1304 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
131
262
393
524
655
786
917
1048
1179
1304

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
615.1 615.1 33% 0 99% ADM07404

Alignments

methyl transferase/helicase [Grapevine leafroll-associated virus 3]

Sequence ID: gb|ADM07404.1| Length: 2237 Number of Matches: 1

Range 1: 1051 to 1482 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
615.1 bits(1585) 0.0 428/432(99%) 0/432(0%) Minus/Plus
Query        3  FWSEVSLNDFITFVLRNKVLIGIFVASLGAAPIAWKYRRGIAANARRYAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMXXXXXXXXXGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVPXXXXXXXXXXXXXXXXXTNVRDVGIXXXXXXXXXXXTHSPRSVQYTYXXXXXXXXXXXXERQGDPSGSGTADAMAFVESVKKGVDDVFHQQSSGETAREVEVDDKGLLPESDIGDAPIQEGGRAVDDNTAQAAADEGHRXXXXXXXXXXXXXXXXXXXXXEIPAQKEVKLEVPPTTVPSATPHVEEKPAPSVTT  1298
                FWSEVSLNDF TFVLRNKVLIGIFVASLGAAPIAWKYRRGIAANARRYAGSSYETLSSLSSQAAGGLRGLTSSTVSGGSLVVRRGFSSAVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMFFFGLGTLLGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVPGDDSDGSTSSVS YDGVTNVRDVGI+TNGEVTGEEETHSPRSVQYTYVEEEVAPSAAVAERQGDPSGSGTADAMAFVESVKKGVDDVFHQQSSGETAREVEVDDKGLLPESDIGDAPIQEGGRAVDDNTAQAAADEGHREPVQSSPESVPPAAVPKVAKSEIPAQKEVKLEVPPTTVPSATP VEEKPAPSVTT
Subject   1051  FWSEVSLNDFTTFVLRNKVLIGIFVASLGAAPIAWKYRRGIAANARRYAGSSYETLSSLSSQAAGGLRGLTSSTVSGGSLVVRRGFSSAVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMFFFGLGTLLGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVPGDDSDGSTSSVSIYDGVTNVRDVGISTNGEVTGEEETHSPRSVQYTYVEEEVAPSAAVAERQGDPSGSGTADAMAFVESVKKGVDDVFHQQSSGETAREVEVDDKGLLPESDIGDAPIQEGGRAVDDNTAQAAADEGHREPVQSSPESVPPAAVPKVAKSEIPAQKEVKLEVPPTTVPSATPLVEEKPAPSVTT  1482

Nucleotide Sequence (243 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
25
50
75
100
125
150
175
200
225
243

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
162.2 162.2 33% 1.074e-44 100% ADM07408

Alignments

Hsp70-like protein [Grapevine leafroll-associated virus 3]

Sequence ID: gb|ADM07408.1| Length: 549 Number of Matches: 1

See 2 more title(s)

Range 1: 461 to 540 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
162.2 bits(409) 0.0 80/80(100%) 0/80(0%) Minus/Plus
Query        2  VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSNKDKGFSDLRIEENFLKSA  241
                VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSNKDKGFSDLRIEENFLKSA
Subject    461  VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSNKDKGFSDLRIEENFLKSA  540

Nucleotide Sequence (822 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
83
166
249
332
415
498
581
664
747
822

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
549.3 549.3 33% 0 99% AOS89857

Alignments

HSP70h [Grapevine leafroll-associated virus 3]

Sequence ID: gb|AOS89857.1| Length: 549 Number of Matches: 1

Range 1: 250 to 522 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
549.3 bits(1414) 0.0 271/273(99%) 0/273(0%) Plus/Plus
Query        3  AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEDVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDNTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGSGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPKETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSN  821
                AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVE VDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDNTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGSGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPKETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILH+KAFTRKNLSN
Subject    250  AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDNTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGSGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPKETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHNKAFTRKNLSN  522

Nucleotide Sequence (313 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
32
64
96
128
160
192
224
256
288
313

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
209.9 209.9 33% 1.133e-62 100% ABY87020

Alignments

divergent coat protein [Grapevine leafroll-associated virus 3]

Sequence ID: gb|ABY87020.1| Length: 477 Number of Matches: 1

Range 1: 236 to 338 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
209.9 bits(533) 0.0 103/103(100%) 0/103(0%) Plus/Plus
Query        3  IDDATLLAPSPVAPAPTEGVGPSEQLDVVALTSDVTELINTRGQGKISFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMI  311
                IDDATLLAPSPVAPAPTEGVGPSEQLDVVALTSDVTELINTRGQGKISFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMI
Subject    236  IDDATLLAPSPVAPAPTEGVGPSEQLDVVALTSDVTELINTRGQGKISFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMI  338

Nucleotide Sequence (1013 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
102
204
306
408
510
612
714
816
918
1013

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
684.5 684.5 33% 0 98% ADI49430

Alignments

Hsp90-like protein [Grapevine leafroll-associated virus 3]

Sequence ID: gb|ADI49430.1| Length: 483 Number of Matches: 1

Range 1: 144 to 480 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
684.5 bits(1765) 0.0 331/337(98%) 0/337(0%) Minus/Plus
Query        3  CLGIQEGKYVDVTQNLESTIVPLRVMEIKKRRVSAHVALPKVVSAYVDLYTNLQELLSDEVTKARTDTVSAYAADSMAFLVKMLPLTAREQWLRDMLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIKSFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYRLRLTPVAALIIMLIYYSVYGTNATRIKRRPDFLNVRIRGKVEKVSLRGVEDRAYRISEKRGINAQRILCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRSMINHADHASIIHYIKTNENQVTGTTLP  1013
                 + +Q GKYVDVTQNLESTIVPLRVMEIKKRRVSAHVALPKVVSAYVDLYTNLQELLSDEVTKARTDTVSAYAADSMAFLVKMLPLTAREQWLRDMLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIKSFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYRLRLTPVAALIIMLIYYSVYGTNATRIKRRPDFLNVRI+GKVEKVSLRGVEDRAYRISEKRGINAQRILCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRSMINHADHASIIHYIKTNENQVTGTTLP
Subject    144  AVSVQVGKYVDVTQNLESTIVPLRVMEIKKRRVSAHVALPKVVSAYVDLYTNLQELLSDEVTKARTDTVSAYAADSMAFLVKMLPLTAREQWLRDMLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIKSFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYRLRLTPVAALIIMLIYYSVYGTNATRIKRRPDFLNVRIKGKVEKVSLRGVEDRAYRISEKRGINAQRILCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRSMINHADHASIIHYIKTNENQVTGTTLP  480

Nucleotide Sequence (425 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
43
86
129
172
215
258
301
344
387
425

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
228.8 228.8 33% 1.574e-72 99% AAR02010

Alignments

HSP70-like protein, partial [Grapevine leafroll-associated virus 3]

Sequence ID: gb|AAR02010.1| Length: 203 Number of Matches: 1

Range 1: 55 to 195 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
228.8 bits(582) 0.0 140/141(99%) 0/141(0%) Minus/Plus
Query        1  EGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDXXXXXXXXXXXXGPDTLLRVVDVMCLFLRALILECERYTSXXXXXXXXXVPADYNSFKRSFVVEALKGLGIPVRGVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG  423
                EGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDV+CLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG
Subject     55  EGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG  195

Nucleotide Sequence (417 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
42
84
126
168
210
252
294
336
378
417

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
203.0 203.0 23% 2.019e-59 100% AIT52513

Alignments

Hsp90-like protein [Grapevine leafroll-associated virus 3]

Sequence ID: gb|AIT52513.1| Length: 483 Number of Matches: 1

Range 1: 380 to 474 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
203.0 bits(515) 0.0 95/95(100%) 0/95(0%) Plus/Plus
Query        3  KREVSLQGVEERAYRLSEKYGINAQRVVCRYYSDLTCLARRYYGIYRNNWKTLSYVDGRLAYDTADCITSKMKGVVDPTHHAQIIHYIKTNDNQV  287
                KREVSLQGVEERAYRLSEKYGINAQRVVCRYYSDLTCLARRYYGIYRNNWKTLSYVDGRLAYDTADCITSKMKGVVDPTHHAQIIHYIKTNDNQV
Subject    380  KREVSLQGVEERAYRLSEKYGINAQRVVCRYYSDLTCLARRYYGIYRNNWKTLSYVDGRLAYDTADCITSKMKGVVDPTHHAQIIHYIKTNDNQV  474

Nucleotide Sequence (345 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
35
70
105
140
175
210
245
280
315
345

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
50.8 50.8 10% 3.742e-05 72% AGE45905

Alignments

polyprotein, partial [Grapevine leafroll-associated virus 3]

Sequence ID: gb|AGE45905.1| Length: 212 Number of Matches: 1

Range 1: 139 to 174 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.8 bits(120) 0.0 26/36(72%) 5/36(14%) Plus/Plus
Query      253  DVILITTPR-----FTKQPHILVGLSRHTRSLVYAA  345
                DV+L  T +     FTKQPHILVGLSRHTRSLVYAA
Subject    139  DVVLFRTKKADDTLFTKQPHILVGLSRHTRSLVYAA  174

Nucleotide Sequence (732 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
74
148
222
296
370
444
518
592
666
732

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
491.1 491.1 33% 5.057e-169 100% ADI49416

Alignments

Hsp70-like protein [Grapevine leafroll-associated virus 3]

Sequence ID: gb|ADI49416.1| Length: 549 Number of Matches: 1

Range 1: 250 to 492 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
491.1 bits(1263) 0.0 243/243(100%) 0/243(0%) Minus/Plus
Query        2  AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR  730
                AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR
Subject    250  AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR  492

Nucleotide Sequence (322 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
33
66
99
132
165
198
231
264
297
322

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
201.8 201.8 30% 1.735e-59 99% AIT52513

Alignments

Hsp90-like protein [Grapevine leafroll-associated virus 3]

Sequence ID: gb|AIT52513.1| Length: 483 Number of Matches: 1

Range 1: 259 to 356 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
201.8 bits(512) 0.0 97/98(99%) 0/98(0%) Minus/Plus
Query       27  AWVYHVVVTVKTILKAFFNKEMPGGIKELKPYVPIESFDPFHELSSYFSRLSYDLSVGKGSKICPTLAEKLVRRLMEENCRLRLTPVAALIIILIYYS  320
                AWVY VVVTVKTILKAFFNKEMPGGIKELKPYVPIESFDPFHELSSYFSRLSYDLSVGKGSKICPTLAEKLVRRLMEENCRLRLTPVAALIIILIYYS
Subject    259  AWVYDVVVTVKTILKAFFNKEMPGGIKELKPYVPIESFDPFHELSSYFSRLSYDLSVGKGSKICPTLAEKLVRRLMEENCRLRLTPVAALIIILIYYS  356

Nucleotide Sequence (1742 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
175
350
525
700
875
1050
1225
1400
1575
1742

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
381.7 381.7 11% 2.901e-126 99% NP_813803

Alignments

21 kDa protein [Grapevine leafroll-associated virus 3]

Sequence ID: ref|NP_813803.1| Length: 185 Number of Matches: 1

See 22 more title(s)

Range 1: 1 to 185 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
381.7 bits(979) 0.0 184/185(99%) 0/185(0%) Minus/Plus
Query      618  MEFRPVLITVRRDPGVNTGSLKVIAYDLHYDNIFDNCVVKSFRDTDTGFTVMKEYSTNSAFILSPYKLFSAVFNKEGEMISNDVGSSFRVYNIFSQMCKDINEISEIQRAGYLETYLGDGQADTDIFFDVLTNNKAKVRWLVNKDHSAWCGILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK  1172
                MEFRPVLITVRRDPGVNTGSLKVIAYDLHYDNIFDNC VKSFRDTDTGFTVMKEYSTNSAFILSPYKLFSAVFNKEGEMISNDVGSSFRVYNIFSQMCKDINEISEIQRAGYLETYLGDGQADTDIFFDVLTNNKAKVRWLVNKDHSAWCGILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK
Subject      1  MEFRPVLITVRRDPGVNTGSLKVIAYDLHYDNIFDNCAVKSFRDTDTGFTVMKEYSTNSAFILSPYKLFSAVFNKEGEMISNDVGSSFRVYNIFSQMCKDINEISEIQRAGYLETYLGDGQADTDIFFDVLTNNKAKVRWLVNKDHSAWCGILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK  185

Nucleotide Sequence (426 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
43
86
129
172
215
258
301
344
387
426

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
62.4 62.4 7% 3.605e-08 100% ADI49442

Alignments

Hsp70-like protein [Grapevine leafroll-associated virus 3]

Sequence ID: gb|ADI49442.1| Length: 549 Number of Matches: 1

Range 1: 1 to 29 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.4 bits(150) 0.0 29/29(100%) 0/29(0%) Minus/Plus
Query        2  MEVGIDFGTTFSTICFSPSGVSGCTPVAG  88
                MEVGIDFGTTFSTICFSPSGVSGCTPVAG
Subject      1  MEVGIDFGTTFSTICFSPSGVSGCTPVAG  29

Nucleotide Sequence (501 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
51
102
153
204
255
306
357
408
459
501

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
341.7 341.7 33% 1.932e-104 99% AIT52509

Alignments

methyl transferase/helicase [Grapevine leafroll-associated virus 3]

Sequence ID: gb|AIT52509.1| Length: 2237 Number of Matches: 1

Range 1: 592 to 756 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
341.7 bits(875) 0.0 165/166(99%) 1/166(1%) Minus/Plus
Query        1  VDVYDMSFVLQVAEAMDKKGCLAFDIALMFPIELLYGNGEVYLEDVDTLVVREGDALTYNVGMCGEVYVHSFANVSGFFTNAYVRASSRNVYKLEYEGCRCGYHHFTMCRAQKLQSAEVTQRSIVPTFLGKSIVFLPVVDGTKVCFKSLVLDSDFVDRIYSYALNT  498
                VDVYDMS VLQVAEAMDKKGCLAFDIALMFPIELLYGNGEVYLEDVDTLVVREGDALTYNVGMCGEVYVHSFANVSGFFTNAYVRASSRNVYKLEYEGCRCGYHHFTMCRAQKLQSAEVTQRSIVPTFLGKSIVFLPVVDGTKVCFKSLVLDSDFVDRIYSYALNT
Subject    592  VDVYDMS-VLQVAEAMDKKGCLAFDIALMFPIELLYGNGEVYLEDVDTLVVREGDALTYNVGMCGEVYVHSFANVSGFFTNAYVRASSRNVYKLEYEGCRCGYHHFTMCRAQKLQSAEVTQRSIVPTFLGKSIVFLPVVDGTKVCFKSLVLDSDFVDRIYSYALNT  756

Nucleotide Sequence (164 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
17
34
51
68
85
102
119
136
153
164

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
69.3 69.3 23% 9.498e-13 95% ACA51534

Alignments

19.6 kDa protein [Grapevine leafroll-associated virus 3]

Sequence ID: gb|ACA51534.1| Length: 177 Number of Matches: 1

Range 1: 140 to 177 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
69.3 bits(168) 0.0 36/38(95%) 0/38(0%) Plus/Plus
Query        3  ILSGENRGLGRVDSLKLVCVGRQGGGNVLQHLQISSLG  116
                ILSGENRGLG VDSLKLVCVGRQGGGNVLQHL ISSLG
Subject    140  ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG  177

Nucleotide Sequence (498 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
50
100
150
200
250
300
350
400
450
498

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
289.3 289.3 28% 3.22e-92 100% AIT52515

Alignments

divergent coat protein [Grapevine leafroll-associated virus 3]

Sequence ID: gb|AIT52515.1| Length: 477 Number of Matches: 1

Range 1: 313 to 452 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
289.3 bits(739) 0.0 140/140(100%) 0/140(0%) Plus/Plus
Query       11  RLRRLVLSKGGSITPQDMGNMIVSMIQLFVLYSTVKNIDVKDGYKVETILGGKPVYLSYSEVREAILGGKYDGTSSNVVRSYMRYYTHTAITLLVEKRIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADILKANSM  430
                RLRRLVLSKGGSITPQDMGNMIVSMIQLFVLYSTVKNIDVKDGYKVETILGGKPVYLSYSEVREAILGGKYDGTSSNVVRSYMRYYTHTAITLLVEKRIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADILKANSM
Subject    313  RLRRLVLSKGGSITPQDMGNMIVSMIQLFVLYSTVKNIDVKDGYKVETILGGKPVYLSYSEVREAILGGKYDGTSSNVVRSYMRYYTHTAITLLVEKRIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADILKANSM  452

Nucleotide Sequence (106 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
106

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
67.4 67.4 32% 3.131e-12 100% CAG38322

Alignments

RNA-dependent RNA polymerase, partial [Grapevine leafroll-associated virus 3]

Sequence ID: emb|CAG38322.1| Length: 217 Number of Matches: 1

Range 1: 163 to 196 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.4 bits(163) 0.0 34/34(100%) 0/34(0%) Minus/Plus
Query        3  SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVL  104
                SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVL
Subject    163  SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVL  196

Nucleotide Sequence (195 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
20
40
60
80
100
120
140
160
180
195

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
131.3 131.3 33% 9.509e-35 100% ADI46631

Alignments

RNA-dependent RNA polymerase, partial [Grapevine leafroll-associated virus 3]

Sequence ID: gb|ADI46631.1| Length: 315 Number of Matches: 1

Range 1: 234 to 297 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
131.3 bits(329) 0.0 64/64(100%) 0/64(0%) Minus/Plus
Query        3  VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSENFGFDVKIFNQAAPYFCSKFLVQVEDSLFF  194
                VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSENFGFDVKIFNQAAPYFCSKFLVQVEDSLFF
Subject    234  VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSENFGFDVKIFNQAAPYFCSKFLVQVEDSLFF  297

Nucleotide Sequence (101 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
65.5 65.5 32% 1.596e-11 94% AGE45905

Alignments

polyprotein, partial [Grapevine leafroll-associated virus 3]

Sequence ID: gb|AGE45905.1| Length: 212 Number of Matches: 1

Range 1: 125 to 156 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
65.5 bits(158) 0.0 30/32(94%) 0/32(0%) Plus/Plus
Query        5  PVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQ  100
                PVMTVHEAQGKTF DVVLFRTKKADD+LFTKQ
Subject    125  PVMTVHEAQGKTFGDVVLFRTKKADDTLFTKQ  156

Nucleotide Sequence (104 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
104

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
71.6 71.6 33% 7.23e-14 100% ANP22271

Alignments

heat shock 70-like protein, partial [Grapevine leafroll-associated virus 3]

Sequence ID: gb|ANP22271.1| Length: 186 Number of Matches: 1

Range 1: 40 to 73 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.6 bits(174) 0.0 34/34(100%) 0/34(0%) Plus/Plus
Query        2  SDAKLGIFVSSMKEDLSNNNAITQHLIPVEGGVE  103
                SDAKLGIFVSSMKEDLSNNNAITQHLIPVEGGVE
Subject     40  SDAKLGIFVSSMKEDLSNNNAITQHLIPVEGGVE  73

Nucleotide Sequence (450 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
45
90
135
180
225
270
315
360
405
450

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
293.5 293.5 32% 5.493e-98 100% ABO26880

Alignments

RNA polymerase, partial [Grapevine leafroll-associated virus 3]

Sequence ID: gb|ABO26880.1| Length: 200 Number of Matches: 1

Range 1: 45 to 189 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
293.5 bits(750) 0.0 145/145(100%) 0/145(0%) Minus/Plus
Query        8  RTMTKELVLSVGSQRRSGGANTWLGNSIVLCTLLSVVLRGLDYDYVVISGDDSLIFSRQPLDVDTSVLSDNFGFDVKMFNQAAPYFCSKFMVQVDDGLFFVPDPLKLFVKFGASKTSDIDLLHEIFQSFVDLSKGLNREDVIQAL  442
                RTMTKELVLSVGSQRRSGGANTWLGNSIVLCTLLSVVLRGLDYDYVVISGDDSLIFSRQPLDVDTSVLSDNFGFDVKMFNQAAPYFCSKFMVQVDDGLFFVPDPLKLFVKFGASKTSDIDLLHEIFQSFVDLSKGLNREDVIQAL
Subject     45  RTMTKELVLSVGSQRRSGGANTWLGNSIVLCTLLSVVLRGLDYDYVVISGDDSLIFSRQPLDVDTSVLSDNFGFDVKMFNQAAPYFCSKFMVQVDDGLFFVPDPLKLFVKFGASKTSDIDLLHEIFQSFVDLSKGLNREDVIQAL  189

Nucleotide Sequence (645 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
65
130
195
260
325
390
455
520
585
645

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
336.3 336.3 26% 5.534e-114 97% AIT52518

Alignments

19.7 kDa protein [Grapevine leafroll-associated virus 3]

Sequence ID: gb|AIT52518.1| Length: 179 Number of Matches: 1

Range 1: 1 to 169 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
336.3 bits(861) 0.0 164/169(97%) 0/169(0%) Minus/Plus
Query        1  MDVSFIIMQILSAIYSNDLSAIYILSNAFKNVSDTIGDGVVVDPLNEVNTIKAFVNSFVTKQMYKEIIVQSIDSAFEYDHVGCITHIAGCLVGHADSVLAVIKEMEMYEVCDSPRGSRKYQRRLSDLCNQNHLLITSAGLQAVEDSGELNANFFISTNGFLTNCGIARM  507
                MDVS IIMQILSAIYSNDLSAIYILSNAFKNVSDTIGDGVVVDPLNEVNTIKAFVNSFVTKQMYKEIIVQSIDSAFEYDHVGCITHIA CLV HADSVLAVIKEMEMYEVC+SPRGSRKYQRRLSDLCNQNHLLITSAGLQAVEDSGELNANFF+STNGFLTNCGIARM
Subject      1  MDVSSIIMQILSAIYSNDLSAIYILSNAFKNVSDTIGDGVVVDPLNEVNTIKAFVNSFVTKQMYKEIIVQSIDSAFEYDHVGCITHIARCLVRHADSVLAVIKEMEMYEVCNSPRGSRKYQRRLSDLCNQNHLLITSAGLQAVEDSGELNANFFVSTNGFLTNCGIARM  169

Nucleotide Sequence (1214 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
122
244
366
488
610
732
854
976
1098
1214

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
802.0 802.0 33% 0 100% ADI49425

Alignments

methyl transferase/helicase [Grapevine leafroll-associated virus 3]

Sequence ID: gb|ADI49425.1| Length: 2237 Number of Matches: 1

Range 1: 1584 to 1984 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
802.0 bits(2070) 0.0 400/401(100%) 0/401(0%) Minus/Plus
Query        1  GWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDERSPSXXXXXXXXXXXXXXVAQKSRGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGSDLIFHSTQDGLRVRDLPYVFIAEKGIFIKGKDVDAVVALGDNLFVCDDILVFHDAINLMGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGL  1203
                GWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDERSPSVPNQQPQNQGTTGTVAQKSRGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAV TAEGVLKVPNQVYESLPGFHVYKSGSDLIFHSTQDGLRVRDLPYVFIAEKGIFIKGKDVDAVVALGDNLFVCDDILVFHDAINLMGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGL
Subject   1584  GWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDERSPSVPNQQPQNQGTTGTVAQKSRGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVATAEGVLKVPNQVYESLPGFHVYKSGSDLIFHSTQDGLRVRDLPYVFIAEKGIFIKGKDVDAVVALGDNLFVCDDILVFHDAINLMGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGL  1984

Nucleotide Sequence (769 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
77
154
231
308
385
462
539
616
693
769

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
471.5 471.5 32% 3.509e-148 97% AOS89842

Alignments

polyprotein [Grapevine leafroll-associated virus 3]

Sequence ID: gb|AOS89842.1| Length: 2775 Number of Matches: 1

Range 1: 87 to 333 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
471.5 bits(1212) 0.0 240/247(97%) 0/247(0%) Plus/Plus
Query       29  GCVWVVRGDGKKVLMEARXXXXXXXXXXXXXXXFEAVTHALIVVHYHRVVPFTPVKREQPKRAVKQDEQKPKRQASQWAVKPTAVGVHVPLPNKQEAPKPAQSVPQQSLEEKATLTFGLFFSKGGGDESGGVILRKGKLFNRALNVPINVKNTFVWAKIWDEASRRRGYFYVKDSIVKFFPIVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFS  769
                G V V+RGDGKKVLMEARTSTSAVSDASSYD VFEAVTHALIVVHYHRVVPFTPVKREQPK AVKQDEQKPKRQASQWAVKPTAVGVHVPLPNKQEAPKPAQSVPQQSLEEKATLTFGLFFSKGGGDES  VILRKGKLFNRALNVPINVKNTFVWAKIWDEASRRRGYFYVKDSIVKFFPIVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFS
Subject     87  GTVSVLRGDGKKVLMEARTSTSAVSDASSYDVVFEAVTHALIVVHYHRVVPFTPVKREQPKPAVKQDEQKPKRQASQWAVKPTAVGVHVPLPNKQEAPKPAQSVPQQSLEEKATLTFGLFFSKGGGDESDAVILRKGKLFNRALNVPINVKNTFVWAKIWDEASRRRGYFYVKDSIVKFFPIVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFS  333

Nucleotide Sequence (345 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
35
70
105
140
175
210
245
280
315
345

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
205.7 205.7 33% 7.615e-61 97% ABY87020

Alignments

divergent coat protein [Grapevine leafroll-associated virus 3]

Sequence ID: gb|ABY87020.1| Length: 477 Number of Matches: 1

Range 1: 92 to 204 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
205.7 bits(522) 0.0 110/113(97%) 0/113(0%) Minus/Plus
Query        2  GDYFECGVCHNKPYLGREVVFCRKYIGGRGVEITTGKXXXXXXXXXXXYVLHVDIVGGAAQTSVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSSPKLNVMLIRS  340
                GDYFECGVCHNKPYLGREVVFC+KYIGGRGVEITTGKNYSSNNWNESSYVLHVDIVGG AQTSVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSS KLNVMLIRS
Subject     92  GDYFECGVCHNKPYLGREVVFCKKYIGGRGVEITTGKNYSSNNWNESSYVLHVDIVGGTAQTSVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSSSKLNVMLIRS  204

Nucleotide Sequence (897 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
90
180
270
360
450
540
630
720
810
897

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
580.9 580.9 33% 0 99% ADI49413

Alignments

RNA-dependent RNA polymerase, partial [Grapevine leafroll-associated virus 3]

Sequence ID: gb|ADI49413.1| Length: 541 Number of Matches: 1

Range 1: 86 to 382 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
580.9 bits(1496) 0.0 295/297(99%) 0/297(0%) Minus/Plus
Query        2  SSVGLPKRNTLKCNLVTFENRNFNADRGCNVGCDDSVAHELKEIFFEEVVNKARLAEVTESHLSSNTMLLSDWLDKRAPNAYKSLKRALGSFVFHPSMLTSYTLMVKADVKPKLDNTPLSKYVTGQNIVYHDRRVTALFSCIFTACVERLKYVVDERWLFYHGMDTAELAVALRNNLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNXXXXXXXXXXXLRGLDYSYIVVSGDDSLIFSRQPLDIDTS  892
                SSVGLPKRNTLKCNLVTFENRNFNADRGCNVGCDDSVAHELKEIFFEEVVNKARLAEVTESHLSSNTMLLSDWLDKRAPNAYKSLKRALGSFVFHPSMLTSYTLMVKADVKPKLDNTPLSKYVTGQNIVYHDR VTALFSCIFTACVERLKYVVDERWLFYHGMDTAELA ALRNNLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNSLVLCTLLSVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTS
Subject     86  SSVGLPKRNTLKCNLVTFENRNFNADRGCNVGCDDSVAHELKEIFFEEVVNKARLAEVTESHLSSNTMLLSDWLDKRAPNAYKSLKRALGSFVFHPSMLTSYTLMVKADVKPKLDNTPLSKYVTGQNIVYHDRCVTALFSCIFTACVERLKYVVDERWLFYHGMDTAELAAALRNNLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNSLVLCTLLSVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTS  382

Nucleotide Sequence (429 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

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Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
43
86
129
172
215
258
301
344
387
429

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
280.0 280.0 32% 3.02e-83 97% ADI49425

Alignments

methyl transferase/helicase [Grapevine leafroll-associated virus 3]

Sequence ID: gb|ADI49425.1| Length: 2237 Number of Matches: 1

Range 1: 641 to 778 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
280.0 bits(715) 0.0 135/139(97%) 1/139(1%) Plus/Plus
Query        2  KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTYRSLVPSFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAVKPQSQTH  418
                KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTYRSLVPSFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAV+ Q +TH
Subject    641  KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTYRSLVPSFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAVRSQ-KTH  778

Nucleotide Sequence (954 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 58 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
96
192
288
384
480
576
672
768
864
954

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
594.3 594.3 32% 0 100% AFP55616

Alignments

coat protein [Grapevine leafroll-associated virus 3]

Sequence ID: gb|AFP55616.1| Length: 313 Number of Matches: 1

Range 1: 1 to 308 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
594.3 bits(1531) 0.0 307/308(100%) 0/308(0%) Plus/Plus
Query       30  MAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFXXXXXXXXXQEPPKQPTTQVVEPPEADIGVVPESETLTPNKLVFEKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDDTTTKTKFFLYVMQIACXXXXXXXXXXKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQ  953
                MAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFATAALATAAQEPPKQPTTQVVEPPEADIGVVPESETLTPNKLVFEKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDDTTTKTKFFLYVMQIACTFFTSSSTE KEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQ
Subject      1  MAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFATAALATAAQEPPKQPTTQVVEPPEADIGVVPESETLTPNKLVFEKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDDTTTKTKFFLYVMQIACTFFTSSSTELKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQ  308