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Queries

Nucleotide Sequence (401 letters)

Query ID:ds2016-122_14
Query definition:No definition line
Query length:336
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 2 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
41
82
123
164
205
246
287
328
369
401

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
75.8 392.2 14% 3.183e-12 63% JX904130.1

Alignments

Uncultured marine virus clone SOG02701, complete genome

Sequence ID: JX904130.1 Length: 1326 Number of Matches: 6

Range 1: 287 to 439 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.8 bits(159) 0.0 32/51(63%) 0/51(0%) Minus/Minus
Query      142  SFCWYSHFLEGLSISSRWKFEAITGL*CP*TFWAARALH*RSQRVLTLAER  294
                +F    +FLEGLS+ +RWKFEAITGL*CP  FWAA ALH*R ++V+ L  R
Subject    287  TFVSAGNFLEGLSVFNRWKFEAITGL*CPWMFWAASALH*RVEQVVHLGSR  439

Range 2: 318 to 419 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.2 bits(149) 0.0 28/34(82%) 0/34(0%) Plus/Plus
Query      173  RQCSARAAQNV*GHHRPVIASNFHRLEIDSPSKK  274
                RQC+A AAQN+ GHHRPVIASNFHRL  DSPSKK
Subject    318  RQCNADAAQNIQGHHRPVIASNFHRLNTDSPSKK  419

Range 3: 307 to 420 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.8 bits(133) 0.0 28/38(74%) 0/38(0%) Minus/Minus
Query      162  TS*RDYRFQVDGSLRQ*QVCDALRRSGPHARYTDGANE  275
                TS*RDYR    GSLRQ*QVCDAL  SGPH RYTD  N+
Subject    307  TS*RDYRCSTGGSLRQ*QVCDALGCSGPHPRYTDELNK  420

Range 4: 307 to 420 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.1 bits(127) 0.0 29/38(76%) 0/38(0%) Plus/Plus
Query      162  LVGSVSVARVRPRTSKGITDLLLPQTSIDLKSIVPLRS  275
                LV  VSV R+RPRTSKGITDLLLPQTS     IVPLRS
Subject    307  LVQLVSVTRMRPRTSKGITDLLLPQTSTG*TPIVPLRS  420

Range 5: 320 to 421 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
60.6 bits(126) 0.0 27/34(79%) 0/34(0%) Plus/Plus
Query      175  SV*RACGPERLRASQTCYCLKLPST*NR*SL*EV  276
                SV*R CGPE  RASQTCYCLKLP   +R*SL*EV
Subject    320  SV*RGCGPEHPRASQTCYCLKLPPVEHR*SL*EV  421

Range 6: 306 to 413 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.7 bits(124) 0.0 27/36(75%) 0/36(0%) Minus/Minus
Query      161  RGTIDFKSMEV*GNNRSVMPLDVLGRTRATLTEPTS  268
                RGTI  + +EV*GNNRSVMPLDVLGR R TLT  TS
Subject    306  RGTIGVQPVEV*GNNRSVMPLDVLGRIRVTLTS*TS  413

Nucleotide Sequence (413 letters)

Query ID:ds2016-122_14
Query definition:No definition line
Query length:336
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 2 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
42
84
126
168
210
252
294
336
378
413

Descriptions

Alignments

Uncultured marine virus clone Q_E6 photosystem II protein D1 (psbA) gene, partial cds

Sequence ID: EU728305.1 Length: 631 Number of Matches: 6

Range 1: 46 to 309 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
147.2 bits(315) 0.0 69/88(78%) 0/88(0%) Plus/Plus
Query       73  GDSYGLIVLHFLLGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAKRTTQTHP  336
                G  Y L+V HFL+GV CYMGREWELS+RLGMRPWI VAYSAPVAAA+AVFL+YP GQGSFSDGMPLGISGTFN+M+VFQA+    THP
Subject     46  GGPYQLVVFHFLIGVFCYMGREWELSYRLGMRPWICVAYSAPVAAASAVFLVYPFGQGSFSDGMPLGISGTFNYMLVFQAEHNILTHP  309

Range 2: 45 to 308 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.8 bits(194) 0.0 58/88(66%) 0/88(0%) Minus/Minus
Query       72  GCVWVVRLAWNTIMKLKVPEIPRGIPSEKLP*PIG*IKKXXXXXXXXXXXXXAIQGRIPRRKLSSHSRPI*QATPSKKCRTISP*ESP  335
                GCV ++  AWNT + L VPEIPRGIPSEKLP*P G* + TA AAATGAEYAT IQGR+P    SSHSRP+*Q TP +K +T S *  P
Subject     45  GCVKMLCSAWNTSI*LNVPEIPRGIPSEKLP*PKG*TRNTAEAAATGAEYATQIQGRMPSL*ESSHSRPM*QKTPMRKWKTTSW*GPP  308

Range 3: 209 to 292 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
39.1 bits(79) 0.0 16/28(57%) 0/28(0%) Minus/Minus
Query      236  CAWLGIQS*S*KYQRFLEAYRQKSFLDQ  319
                CA LGIQ+ S* +QR+ EA+  ++FLDQ
Subject    209  CAQLGIQAYS*MFQRYREAFHLRNFLDQ  292

Range 4: 43 to 147 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.9 bits(72) 0.0 15/35(43%) 0/35(0%) Minus/Minus
Query       70  PRAHTQTETKFPLTTHIASYTK*EV*NN*PIRVTL  174
                PR H ++  KFPLTTH+A     +V N   +R T+
Subject     43  PRTHAKSVRKFPLTTHVAKDANEKVENYELVRTTI  147

Range 5: 210 to 296 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.0 bits(81) 0.0 17/29(59%) 0/29(0%) Plus/Plus
Query      237  WSRKLF*RYASRNLWYFQLHDCIPSQAHH  323
                WSRK     ASR LW  QL+ CIPS A H
Subject    210  WSRKFLRWNASRYLWNIQLYACIPS*AQH  296

Range 6: 84 to 149 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
26.3 bits(51) 0.0 12/22(55%) 0/22(0%) Plus/Plus
Query      111  WCSLLYGS*VGT*FPSGYAPLD  176
                W  LL+GS*VGT   + +A LD
Subject     84  WRLLLHGS*VGTFLQTWHASLD  149

Uncultured marine virus clone I_H6 photosystem II protein D1 (psbA) gene, partial cds

Sequence ID: EU727983.1 Length: 746 Number of Matches: 5

Range 1: 46 to 309 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
140.8 bits(301) 0.0 69/88(78%) 0/88(0%) Plus/Plus
Query       73  GDSYGLIVLHFLLGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAKRTTQTHP  336
                G  Y L+V HFLLGV  YMGREWELS+RLGMRPWI VAYSAPVAAATAVFL+YP GQGSFSDGMPLGISGTFN+M+VFQA+     HP
Subject     46  GGPYQLVVFHFLLGVFSYMGREWELSYRLGMRPWIFVAYSAPVAAATAVFLVYPFGQGSFSDGMPLGISGTFNYMLVFQAEHNILMHP  309

Range 2: 543 to 599 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
27.2 bits(53) 0.0 11/19(58%) 0/19(0%) Plus/Plus
Query      347  PRSEERRVGKECRPRRSPH  403
                PRS  RR    CRPRR  H
Subject    543  PRSMARRWNLVCRPRRQHH  599

Range 3: 195 to 308 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 21/38(55%) 0/38(0%) Minus/Minus
Query      222  GCVWVVRLAWNTIMKLKVPEIPRGIPSEKLP*PIG*IK  335
                GC+ ++  AW T M L VP +P GIPSEK P*P G* +
Subject    195  GCIRILCSAWKTSM*LNVPLMPSGIPSEKEP*PNG*TR  308

Range 4: 60 to 149 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.4 bits(95) 0.0 20/30(67%) 0/30(0%) Minus/Minus
Query       87  IQGRIPRRKLSSHSRPI*QATPSKKCRTIS  176
                IQG IP R LSSHSRP+*+ TPS+K +T S
Subject     60  IQGLIPNR*LSSHSRPM*EKTPSRKWKTTS  149

Range 5: 64 to 282 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.8 bits(109) 0.0 31/73(42%) 0/73(0%) Minus/Minus
Query       91  LEYNHEVESTRDS*RHTVRKASLTNWVDQEXXXXXXXXXXXXXXNPRAHTQTETKFPLTTHIASYTK*EV*NN  309
                LE  H VE T D+ RHTVR+ +LT  V+++      +RS I N +P  H  + TKFPL++H+    K EV N+
Subject     64  LENQHVVERTADAERHTVRERTLTKRVNEKYRRRCGDRSRISNKDPGPHP*SITKFPLSSHVRKDAKQEVEND  282

Uncultured marine virus clone I_A11 photosystem II protein D1 (psbA) gene, partial cds

Sequence ID: EU727925.1 Length: 747 Number of Matches: 5

Range 1: 46 to 309 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
140.8 bits(301) 0.0 69/88(78%) 0/88(0%) Plus/Plus
Query       73  GDSYGLIVLHFLLGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAKRTTQTHP  336
                G  Y L+V HFLLGV  YMGREWELS+RLGMRPWI VAYSAPVAAATAVFL+YP GQGSFSDGMPLGISGTFN+M+VFQA+     HP
Subject     46  GGPYQLVVFHFLLGVFSYMGREWELSYRLGMRPWIFVAYSAPVAAATAVFLVYPFGQGSFSDGMPLGISGTFNYMLVFQAEHNILMHP  309

Range 2: 543 to 599 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
27.2 bits(53) 0.0 11/19(58%) 0/19(0%) Plus/Plus
Query      347  PRSEERRVGKECRPRRSPH  403
                PRS  RR    CRPRR  H
Subject    543  PRSMARRWNLVCRPRRQHH  599

Range 3: 195 to 308 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 21/38(55%) 0/38(0%) Minus/Minus
Query      222  GCVWVVRLAWNTIMKLKVPEIPRGIPSEKLP*PIG*IK  335
                GC+ ++  AW T M L VP +P GIPSEK P*P G* +
Subject    195  GCIRILCSAWKTSM*LNVPLMPSGIPSEKEP*PNG*TR  308

Range 4: 60 to 149 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.0 bits(94) 0.0 20/30(67%) 0/30(0%) Minus/Minus
Query       87  IQGRIPRRKLSSHSRPI*QATPSKKCRTIS  176
                IQG IP R LSSHSRP+*+ TPS+K +T S
Subject     60  IQGLIPSR*LSSHSRPM*EKTPSRKWKTTS  149

Range 5: 64 to 282 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.8 bits(109) 0.0 31/73(42%) 0/73(0%) Minus/Minus
Query       91  LEYNHEVESTRDS*RHTVRKASLTNWVDQEXXXXXXXXXXXXXXNPRAHTQTETKFPLTTHIASYTK*EV*NN  309
                LE  H VE T D+ RHTVR+ +LT  V+++      +RS I N +P  H  + TKFPL++H+    K EV N+
Subject     64  LENQHVVERTADAERHTVRERTLTKRVNEKYRRRCGDRSRISNKDPGPHP*SITKFPLSSHVRKDAKQEVEND  282

UNVERIFIED: Uncultured marine virus clone N302P_30 photosystem II protein D1 like (psbA) gene, partial sequence

Sequence ID: GU939955.1 Length: 723 Number of Matches: 4

Range 1: 34 to 297 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
140.4 bits(300) 0.0 68/88(77%) 0/88(0%) Plus/Plus
Query       73  GDSYGLIVLHFLLGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAKRTTQTHP  336
                G  Y L+V HFL+GV  YMGREWELS+RLGMRPWI VAYSAPVAAATAVFL+YP GQGSFSDGMPLGISGTFN+M+VFQA+     HP
Subject     34  GGPYQLVVFHFLIGVFAYMGREWELSYRLGMRPWIFVAYSAPVAAATAVFLVYPFGQGSFSDGMPLGISGTFNYMLVFQAEHNILMHP  297

Range 2: 531 to 587 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
27.2 bits(53) 0.0 11/19(58%) 0/19(0%) Plus/Plus
Query      347  PRSEERRVGKECRPRRSPH  403
                PRS  RR    CRPRR  H
Subject    531  PRSVARRWNLVCRPRRQHH  587

Range 3: 183 to 296 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 21/38(55%) 0/38(0%) Minus/Minus
Query      222  GCVWVVRLAWNTIMKLKVPEIPRGIPSEKLP*PIG*IK  335
                GC+ ++  AW T M L VP +P GIPSEK P*P G* +
Subject    183  GCIRILCSAWKTSM*LNVPLMPSGIPSEKEP*PNG*TR  296

Range 4: 48 to 137 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
42.8 bits(87) 0.0 19/30(63%) 0/30(0%) Minus/Minus
Query       87  IQGRIPRRKLSSHSRPI*QATPSKKCRTIS  176
                IQG IP R LSSHSRP+*  TP +K +T S
Subject     48  IQGLIPNR*LSSHSRPM*AKTPMRKWKTTS  137

Synechococcus phage S SSM5, complete genome

Sequence ID: GU071097.1 Length: 176184 Number of Matches: 6

Range 1: 165040 to 165303 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
146.3 bits(313) 0.0 69/88(78%) 0/88(0%) Plus/Plus
Query       73  GDSYGLIVLHFLLGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAKRTTQTHP  336
                G  Y L+V HFL+GVACYMGREWELS+RLGMRPWI VAYSAPVAAA AVFL+YP GQGSFSDGMPLGISGTFN+M VFQA+     HP
Subject 165040  GGPYQLVVFHFLIGVACYMGREWELSYRLGMRPWICVAYSAPVAAAAAVFLVYPFGQGSFSDGMPLGISGTFNYMFVFQAEHNILMHP  165303

Range 2: 165039 to 165302 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
100.5 bits(213) 0.0 60/88(68%) 0/88(0%) Minus/Minus
Query       72  GCVWVVRLAWNTIMKLKVPEIPRGIPSEKLP*PIG*IKKXXXXXXXXXXXXXAIQGRIPRRKLSSHSRPI*QATPSKKCRTISP*ESP  335
                GC+ ++  AW T + LKVPEIPRGIPSEKLP*P G* +KTA AAATGA YAT IQGRIPRR  SSHSRP+*QATP +K +T + *  P
Subject 165039  GCIRMLCSAWKTNI*LKVPEIPRGIPSEKLP*PKG*TRKTAAAAATGALYATQIQGRIPRR*DSSHSRPM*QATPMRKWKTTNW*GPP  165302

Range 3: 165037 to 165276 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.0 bits(166) 0.0 43/80(54%) 0/80(0%) Minus/Minus
Query       70  LEYNHEVESTRDS*RHTVRKASLTNWVDQEXXXXXXXXXXXXXXNPRAHTQTETKFPLTTHIASYTK*EV*NN*PIRVTL  309
                LE  H V+STRD+ RHT+R+  LT  +DQEN  SS +R  IC +NPR HT+   +FPLTTH+ASYT  EV +N  +R T+
Subject 165037  LEDEHIVKSTRDTKRHTIRETPLTERIDQENCGSSSDRCAICYANPRTHTEAVRQFPLTTHVASYTDEEVEDNQLVRTTV  165276

Range 4: 165032 to 165277 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.5 bits(141) 0.0 39/82(48%) 0/82(0%) Minus/Minus
Query       65  LGIQS*S*KYQRFLEAYRQKSFLDQLGRSRKXXXXXXXXXXXXXQSKGAYPDGN*VPTHDPYSKLHQVRSVEQLAHKSHPST  310
                LG ++ S*KYQR+ EAY Q++ LD+  R  K + Q +Q   M ++SK AY  G  VPTHDP SKLH+  S  Q   K H  T
Subject 165032  LGRRTYS*KYQRYQEAYHQRNSLDRKDRPGKLRQQQRQVRYMLRKSKDAYRGGKTVPTHDPCSKLHR*GSGRQPTGKDHRCT  165277

Range 5: 165060 to 165143 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.4 bits(71) 0.0 17/28(61%) 0/28(0%) Plus/Plus
Query       93  CSTLLTWCSLLYGS*VGT*FPSGYAPLD  176
                C  L   CSLL+GS*VGT  P  YA LD
Subject 165060  CLPLPHRCSLLHGS*VGTVLPPRYASLD  165143

Range 6: 165207 to 165290 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.4 bits(60) 0.0 14/28(50%) 0/28(0%) Plus/Plus
Query      240  SRKLF*RYASRNLWYFQLHDCIPSQAHH  323
                SR+  * YAS  LWYF L+  +PS+  H
Subject 165207  SREFL*WYASWYLWYF*LYVRLPSRT*H  165290