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Nucleotide Sequence (462 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 1 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
47
94
141
188
235
282
329
376
423
462

Descriptions

Alignments

Xanthophyllomyces dendrorhous virus L1A capsid protein (CP) and RNA dependent RNA polymerase (RdRp) genes, complete cds

Sequence ID: JN997472.1 Length: 4655 Number of Matches: 1

Range 1: 4126 to 4563 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
100.0 bits(212) 0.0 50/146(34%) 0/146(0%) Minus/Plus
Query        5  VLDCYRIKTSHRCVGGISEDKRSDVKWLIRSSGFRKGATQIGVLPGVVDYSRMVKASLQLERPLQDFISRIMRATYDAVIPKERNINVSRNGNIKRYEILRALFKVHKEETDIVNYGKAKMTGFLMDVLNGANKSGPLLHLLNGSK  442
                V D Y IK +HR VGGISE+K S +  LI S    +    I  LPGV +Y+  +  +L++   ++    R+  ATY+AV  K+R + + R    + +  +R ++K HK      NYGKA + GF ++VL        +  +LN S+
Subject   4126  VEDIYLIKNAHRVVGGISEEKDSKMGVLITSQLRAQKNVSIPYLPGVNEYANEIHKALKINVSIKTICDRLYDATYEAVSIKDRKMKILRENRDQWFVNVRRIYKAHKGSQLSQNYGKAALVGFALEVLGREMPDATITTILNTSQ  4563

Xanthophyllomyces dendrorhous virus L2 capsid protein (CP) and RNA dependent RNA polymerase (RdRp) genes, complete cds

Sequence ID: JN997474.2 Length: 3666 Number of Matches: 1

Range 1: 3163 to 3600 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
100.0 bits(212) 0.0 50/146(34%) 0/146(0%) Minus/Plus
Query        5  VLDCYRIKTSHRCVGGISEDKRSDVKWLIRSSGFRKGATQIGVLPGVVDYSRMVKASLQLERPLQDFISRIMRATYDAVIPKERNINVSRNGNIKRYEILRALFKVHKEETDIVNYGKAKMTGFLMDVLNGANKSGPLLHLLNGSK  442
                V D Y IK +HR VGGISE+K S +  LI S    +    I  LPGV +Y+  +  +L++   ++    R+  ATY+AV  K+R + + R    + +  +R ++K HK      NYGKA + GF ++VL        +  +LN S+
Subject   3163  VEDIYLIKNAHRVVGGISEEKDSKMGVLITSQLRAQKNVSIPYLPGVNEYANEIHKALKINVSIKTICDRLYDATYEAVSIKDRKMKILRENRDQWFVNVRRIYKAHKGSQLSQNYGKAALVGFALEVLGREMPDATITTILNTSQ  3600

Wuhan insect virus 26 strain WHZM10161 hypothetical protein 1 and hypothetical protein 2 genes, complete cds

Sequence ID: KX882983.1 Length: 4571 Number of Matches: 1

Range 1: 4077 to 4511 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.0 bits(238) 0.0 53/145(37%) 0/145(0%) Minus/Plus
Query        2  DCYRIKTSHRCVGGISEDKRSDVKWLIRSSGFRKGATQIGVLPGVVDYSRMVKASLQLERPLQDFISRIMRATYDAVIPKERNINVSRNGNIKRYEILRALFKVHKEETDIVNYGKAKMTGFLMDVLNGANKSGPLLHLLNGSKN  436
                D Y I+T+HR VGGI+ED  + V   IR+S      T    LPGV  Y+R++K  L+LE P+    +RI  AT +AV    + + V +  N++RY + RAL++ + + T+   +GKA +TGF+ DVL    +   +  L++ ++N
Subject   4077  DLYDIRTAHRVVGGIAEDVSARVDKFIRTSSESIETTLPDTLPGVDAYARLLKKVLELEVPVSVVSTRIRNATLNAVQLTRKTVTVEKTLNVQRYMVYRALYRAYADVTNNPMFGKAMLTGFIFDVLTQNAQLSAVAQLVSSAQN  4511

Wuhan insect virus 26 strain WHZM10161 hypothetical protein 1 and hypothetical protein 2 genes, complete cds

Sequence ID: NC_033465.1 Length: 4571 Number of Matches: 1

Range 1: 4077 to 4511 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.0 bits(238) 0.0 53/145(37%) 0/145(0%) Minus/Plus
Query        2  DCYRIKTSHRCVGGISEDKRSDVKWLIRSSGFRKGATQIGVLPGVVDYSRMVKASLQLERPLQDFISRIMRATYDAVIPKERNINVSRNGNIKRYEILRALFKVHKEETDIVNYGKAKMTGFLMDVLNGANKSGPLLHLLNGSKN  436
                D Y I+T+HR VGGI+ED  + V   IR+S      T    LPGV  Y+R++K  L+LE P+    +RI  AT +AV    + + V +  N++RY + RAL++ + + T+   +GKA +TGF+ DVL    +   +  L++ ++N
Subject   4077  DLYDIRTAHRVVGGIAEDVSARVDKFIRTSSESIETTLPDTLPGVDAYARLLKKVLELEVPVSVVSTRIRNATLNAVQLTRKTVTVEKTLNVQRYMVYRALYRAYADVTNNPMFGKAMLTGFIFDVLTQNAQLSAVAQLVSSAQN  4511

Xanthophyllomyces dendrorhous virus L1b capsid protein (CP) and RNA dependent RNA polymerase (RdRp) genes, complete cds

Sequence ID: JN997473.1 Length: 4619 Number of Matches: 3

Range 1: 4115 to 4537 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
102.3 bits(217) 0.0 51/141(36%) 0/141(0%) Minus/Plus
Query       29  HMTVLDCYRIKTSHRCVGGISEDKRSDVKWLIRSSGFRKGATQIGVLPGVVDYSRMVKASLQLERPLQDFISRIMRATYDAVIPKERNINVSRNGNIKRYEILRALFKVHKEETDIVNYGKAKMTGFLMDVLNGANKSGPL  451
                +M V D YRIKT+HR  GG+SE   SDV   +     +    +I  L GV DY+R V   L++ + L     R+ +ATY+AV+PK R + V  N   K    ++A++K  K +     YGKA + G  +DV+  ++K   L
Subject   4115  NMPVEDFYRIKTTHRVAGGVSEAIDSDVSMSVIRGIDKSFNIKIPKLQGVHDYARAVAMELEMMKRLDYITDRMYKATYEAVVPKTRGMTVVPNKEEKWCYNVKAIYKAFKGKIQTAGYGKAALVGMALDVIQTSDKDTTL  4537

Range 2: 4123 to 4296 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
39.6 bits(80) 0.0 23/58(40%) 0/58(0%) Plus/Minus
Query      270  SDAFTILE*STTPGSTPICVAPFLNPDDLINHLTSDRLSSLMPPTHLWEVFIL*QSST  443
                S   T   *S TP +  I +   L+   + + LTS+ ++S  PP  LW V IL*+SST
Subject   4123  SSIATARA*SCTPCNLGILMLKLLSMPLITDILTSESIASDTPPATLWVVLIL*KSST  4296

Range 3: 4324 to 4506 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.8 bits(63) 0.0 23/61(38%) 0/61(0%) Plus/Minus
Query       60  TSIRKPVILAFP*LTISVSSLCTLNNARKISYRLILPFLETFMFLSFGITASYVARIILEM  242
                TS   P   AFP*  + +  L  L  A  + +     F  T M L  G TASYVA  IL +
Subject   4324  TSRAIPTNAAFP*PAVCIFPLNALYIALTL*HHFSSLFGTTVMPLVLGTTASYVALYILSV  4506