Nucleotide Sequence (351 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
98.2 | 148.8 | 45% | 4.424e-19 | 38% | KX882984.1 | |
112.4 | 172.6 | 24% | 2.343e-23 | 42% | HM004067.2 | |
94.5 | 148.8 | 25% | 5.614e-18 | 44% | KP900886.1 | |
93.2 | 93.2 | 24% | 1.456e-17 | 44% | HE579591.1 | |
93.2 | 93.2 | 24% | 1.456e-17 | 44% | HE579602.1 |
Alignments
Wuhan insect virus 30 strain WHZM9752 hypothetical protein gene, complete cds
Sequence ID: KX882984.1 Length: 3414 Number of Matches: 2
Range 1: 3041 to 3364 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
98.2 bits(208) | 0.0 | 42/108(39%) | 0/108(0%) | Plus/Plus |
Query 25 EEAFEELLRFDGRHINTAAIGHVKQFMDMEGYLCQDGKELSKEEIVNILGNGEVSVAAVEFTGNPHYRRLVPDFWGLKITTFCQHKLNVGAFRPRMAEEVFKDLCYMA 348 E+ F ++ + A V + ++EG+L ++ + L++ EI+ I+ NGEV A++F GN +YRRLVP+F L+ITTFC+ LN P AE++F+ LCYM+ Subject 3041 EQLFGLFTEYETDLADGAKFMSVGKVSELEGFLTRNDRVLTRAEIIEIVSNGEVKEEALDFKGNLYYRRLVPEFIALRITTFCRELLNREIATPDGAEDIFETLCYMS 3364
Range 2: 3118 to 3360 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
50.6 bits(104) | 0.0 | 31/81(38%) | 0/81(0%) | Minus/Minus |
Query 102 M*HKSLNTSSAILGLNAPTFSLCWQNVVIFSPQKSGTSRL*CGLPVNSTAATETSPLPRMFTISSFDSSFPSWHRYPSISM 344 +*H+ N SSA G+ F+ QNVVI SGT+R * P+ S+A++ TSPL + IS+ S+ + PS S+ Subject 3118 I*HRVSNISSAPSGVAISRFNSSLQNVVILRAINSGTNRR*YRFPLKSSASSLTSPLLTISIISALVSTLSFRVKNPSNSL 3360
Verticillium dahliae chrysovirus 1 segment 1, complete sequence
Sequence ID: HM004067.2 Length: 3594 Number of Matches: 2
Range 1: 119 to 370 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.4 bits(239) | 0.0 | 41/84(49%) | 0/84(0%) | Plus/Minus |
Query 97 QFMDMEGYLCQDGKELSKEEIVNILGNGEVSVAAVEFTGNPHYRRLVPDFWGLKITTFCQHKLNVGAFRPRMAEEVFKDLCYMA 348 +F ++ G++C +G+ELSK E+V+I+G+G V + A++F GNPHYRRLVPDF G + T FC+ +N GA + + VF+ +CYMA Subject 119 RFSELAGHVCVNGRELSKTELVDIMGDGRVRLEALDFKGNPHYRRLVPDFMGRRATFFCKEAINSGAADEEVGQYVFETICYMA 370
Range 2: 120 to 368 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
60.2 bits(125) | 0.0 | 35/83(42%) | 0/83(0%) | Minus/Plus |
Query 99 AM*HKSLNTSSAILGLNAPTFSLCWQNVVIFSPQKSGTSRL*CGLPVNSTAATETSPLPRMFTISSFDSSFPSWHRYPSISMN 347 AM*H NT AP Q V P KSGT RL*CG P+ S A++ T P P + T S SS P H +P+ S N Subject 120 AM*HIVSNTY*PTSSSAAPELIASLQKNVARLPMKSGTRRL*CGFPLKSRASSLTRPSPMISTNSVLLSSLPFTHTWPASSEN 368
Macrophomina phaseolina chrysovirus 1 isolate TN263 RNA dependent RNA polymerase gene, complete cds
Sequence ID: KP900886.1 Length: 3712 Number of Matches: 2
Range 1: 3296 to 3547 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
94.5 bits(200) | 0.0 | 39/84(46%) | 0/84(0%) | Plus/Plus |
Query 97 QFMDMEGYLCQDGKELSKEEIVNILGNGEVSVAAVEFTGNPHYRRLVPDFWGLKITTFCQHKLNVGAFRPRMAEEVFKDLCYMA 348 ++++ G L GK L KEEIVN++ +G VS AVEF G+ +YRRLVP+F L+IT +C+ +N A +AE+ F+ LCYM+ Subject 3296 RYIEFAGQLEMQGKTLEKEEIVNLMSDGIVSSEAVEFQGDVYYRRLVPEFIALRITYYCREAINKKACSVEVAEDAFRILCYMS 3547
Range 2: 3301 to 3543 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.2 bits(112) | 0.0 | 36/81(44%) | 0/81(0%) | Minus/Minus |
Query 102 M*HKSLNTSSAILGLNAPTFSLCWQNVVIFSPQKSGTSRL*CGLPVNSTAATETSPLPRMFTISSFDSSFPSWHRYPSISM 344 M*H N SSA L+A F Q VI SGT RL* P NSTA+ T P TISSF + FP P+ SM Subject 3301 M*HSIRNASSATSTLHAFLFIASLQ**VILRAMNSGTKRL*YTSPWNSTASLLTIPSLIRLTISSFSNVFPCISNCPANSM 3543
Uncultured chrysovirus genomic RNA containing putative RdRp, contig 469Hv1_454_2
Sequence ID: HE579591.1 Length: 1236 Number of Matches: 1
Range 1: 920 to 1171 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
93.2 bits(197) | 0.0 | 37/84(44%) | 0/84(0%) | Plus/Plus |
Query 97 QFMDMEGYLCQDGKELSKEEIVNILGNGEVSVAAVEFTGNPHYRRLVPDFWGLKITTFCQHKLNVGAFRPRMAEEVFKDLCYMA 348 +F D+ G++ +G+ELSKE+I + G V+ A++F GNP YRRLVPDF K T FC+ +N+ A E+F+ +CYMA Subject 920 RFRDLAGHIAINGRELSKEDITRVAGGQYVNEEALDFGGNPFYRRLVPDFVAYKATFFCREVINLEIASKEEAAEIFETVCYMA 1171
Uncultured chrysovirus genomic RNA containing putative RdRp, contig 469Hv1_cloning_16
Sequence ID: HE579602.1 Length: 1168 Number of Matches: 1
Range 1: 850 to 1101 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
93.2 bits(197) | 0.0 | 37/84(44%) | 0/84(0%) | Plus/Plus |
Query 97 QFMDMEGYLCQDGKELSKEEIVNILGNGEVSVAAVEFTGNPHYRRLVPDFWGLKITTFCQHKLNVGAFRPRMAEEVFKDLCYMA 348 +F D+ G++ +G+ELSKE+I + G V+ A++F GNP YRRLVPDF K T FC+ +N+ A E+F+ +CYMA Subject 850 RFRDLAGHIAINGRELSKEDITRVAGGQYVNEEALDFGGNPFYRRLVPDFVAYKATFFCREVINLEIASKEEAAEIFETVCYMA 1101