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Queries

Nucleotide Sequence (646 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 16 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
65
130
195
260
325
390
455
520
585
646

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
244.2 244.2 32% 1.488e-69 62% YP_004940641

Alignments

MET/HEL gene product [Grapevine leafroll-associated virus 1]

Sequence ID: ref|YP_004940641.1| Length: 2204 Number of Matches: 1

See 1 more title(s)

Range 1: 1070 to 1274 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
244.2 bits(622) 0.0 127/205(62%) 0/205(0%) Plus/Plus
Query        9  NKSSMLALGGGLVLIASIIAFRRQVFIKAQGFVRKVRSSVAFSKEKVVLGLGNMKKSFGESKRKAIKCTQGSVQTMKALAEAEMSERVAAFSGEIGYIYGDSLNVQTVCLTASAYLSSCYEKSAILLLLTPKRFRYIGSVGYGVAALKCLRDQEKVRALKLFGIAVALALTGKKGVSRAANLQILFPKRGDVYEGVTNFYRQQLQ  623
                +KSS+L  GGGL+L+AS++AFRRQ+  +A G  + VR+S+  +K K+VLGL ++K+  G  +R A+   QGSV+++K +A AE  +RV+ +  E+GYIYGDSLNVQTVCLTA+AYLSS YEKSAIL+LL PKRFRYIGSVGYG+AAL+C++  E  RA KL G+A  LALT KKG SRAA+LQI+FPKRGDVYEGVT+FYRQ+ +
Subject   1070  SKSSLLMFGGGLLLMASMLAFRRQILNRAHGLAQGVRTSLKKTKGKLVLGLSDLKERLGSVRRNAVVSAQGSVRSLKVVARAEFKDRVSGYVEEMGYIYGDSLNVQTVCLTAAAYLSSSYEKSAILILLAPKRFRYIGSVGYGIAALRCIKGGEYGRASKLMGVAACLALTAKKGASRAASLQIVFPKRGDVYEGVTSFYRQRAE  1274

Nucleotide Sequence (425 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 16 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
43
86
129
172
215
258
301
344
387
425

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
256.9 256.9 31% 3.474e-75 93% YP_004940641

Alignments

MET/HEL gene product [Grapevine leafroll-associated virus 1]

Sequence ID: ref|YP_004940641.1| Length: 2204 Number of Matches: 1

See 1 more title(s)

Range 1: 814 to 945 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
256.9 bits(655) 0.0 123/132(93%) 0/132(0%) Plus/Plus
Query       27  LWNCIVLIVRKLCSSFFSGMNEYALTMLQALGSNLDVLMDQNFQFVRTVPATVTLHLVAETNPCFTDRSTLLDEGLMAYRLHLRNGTNIKVAKDLVREAHKILKLMRADEKAKAEKKGLEVDVKDITEDDIL  422
                LWNCIVLIVRKLCSSFFSGMNEYALTMLQALGSNLDVLMDQNF+FVRTVPATVTLHLVAETNPCFTDRS LLDEGLMAYRLHLRNGTNIKVAKDLVREAHKIL+ MRA EKAKAE KGLEVD ++ITEDDIL
Subject    814  LWNCIVLIVRKLCSSFFSGMNEYALTMLQALGSNLDVLMDQNFRFVRTVPATVTLHLVAETNPCFTDRSMLLDEGLMAYRLHLRNGTNIKVAKDLVREAHKILRSMRAAEKAKAESKGLEVDEREITEDDIL  945

Nucleotide Sequence (430 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 16 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
43
86
129
172
215
258
301
344
387
430

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
227.6 227.6 31% 2.113e-68 95% ABM05861

Alignments

RNA dependent-RNA polymerase, partial [Grapevine leafroll-associated virus 1]

Sequence ID: gb|ABM05861.1| Length: 527 Number of Matches: 1

Range 1: 318 to 451 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
227.6 bits(579) 0.0 127/134(95%) 0/134(0%) Minus/Plus
Query        2  VFGFQSGEYDSVVTMGKNELVLSVGAQRRSGGANTWLGNTLVLMTLLAISLKGSEPSLVVVCGDDSLIFSKEELLINDRILEESFGFDLKLSCQCTPYFCSKYLVRTPDHCYXXXXXXXXXXXXXLEREPNEDL  403
                V  F  GEYDSVVTMGKNELVLSVGAQRRSGGANTWLGNTLVLMTLLAISLKGSEPSLVVVCGDDSLIFSK ELLINDRILEESFGFDLKL+CQC PYFCSKYLVRTPDHCYFLPDPFKLFLKLSLEREPNEDL
Subject    318  VDAFFCGEYDSVVTMGKNELVLSVGAQRRSGGANTWLGNTLVLMTLLAISLKGSEPSLVVVCGDDSLIFSKNELLINDRILEESFGFDLKLTCQCAPYFCSKYLVRTPDHCYFLPDPFKLFLKLSLEREPNEDL  451

Nucleotide Sequence (781 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 16 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
79
158
237
316
395
474
553
632
711
781

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
389.4 389.4 32% 9.84e-120 82% ANP22138

Alignments

methyltransferase/helicase [Grapevine leafroll-associated virus 1]

Sequence ID: gb|ANP22138.1| Length: 2204 Number of Matches: 1

Range 1: 1571 to 1820 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
389.4 bits(999) 0.0 204/250(82%) 0/250(0%) Minus/Plus
Query       31  GIHADDERCYASGVSVVTVNLNGRARFRVRSNKTGKITEHLLDDGDVFVMSSGMQRDHKHAVESLDDGRVSITLRNATVDYKKRDATDGTRTENDVVRRSGVPGSDGKVSEVDKSLQXXXXXXXXXXXXGESVATDHQSVSKCTIGVAVETGCVDKESWVLGEDPVLGIRSFNDVIYCKDLKAAGTEAPAIEFIMYLARRCFDLFIKLKRARDLVAKTDKRVGHKFPLAVYENLPGLRVYDANFKAVANA  780
                G HADDE+CY SGVSVVTVNLNG+ARFRVRSNKTG++ EHLL DGDVFVMS GMQRD KH+VESLD+GRVSITLRNATVDY KR+AT+G R +++V  RS V  SDGK S+  K L  PVPSSGV SSSGES AT  QS SK TIG AVE GC+DK+SWVLGEDPVLGI+SFNDV+YCKDLK AGTEAPAIEFIMYLARRCFDLFIKLKRARDLVAKTDKRVGHKFPLAVYENLPGLRVYDANFK VANA
Subject   1571  GFHADDEKCYTSGVSVVTVNLNGQARFRVRSNKTGEVVEHLLGDGDVFVMSPGMQRDFKHSVESLDEGRVSITLRNATVDYHKREATEGKRIKDEVTPRSRVSVSDGKTSKEAKGLLGPVPSSGVSSSSGESEATVRQSASKSTIGTAVEMGCIDKDSWVLGEDPVLGIQSFNDVVYCKDLKTAGTEAPAIEFIMYLARRCFDLFIKLKRARDLVAKTDKRVGHKFPLAVYENLPGLRVYDANFKVVANA  1820

Nucleotide Sequence (418 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 16 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
42
84
126
168
210
252
294
336
378
418

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
119.4 119.4 14% 1.058e-31 93% ABM05862

Alignments

hypothetical protein [Grapevine leafroll-associated virus 1]

Sequence ID: gb|ABM05862.1| Length: 59 Number of Matches: 1

Range 1: 1 to 59 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
119.4 bits(298) 0.0 55/59(93%) 0/59(0%) Plus/Plus
Query       17  MDLRQFSHELLYTVSLFILVVLCFAVYFVVRAIRHCCAKIEDKPVEGPANSSFRYVAQP  193
                MDLRQFSHELLYTVSLF+LVVLCFAVYF+VRAIRHCC KIEDKPVEGP NSSFRYVAQP
Subject      1  MDLRQFSHELLYTVSLFVLVVLCFAVYFIVRAIRHCCTKIEDKPVEGPTNSSFRYVAQP  59

Nucleotide Sequence (489 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 16 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
49
98
147
196
245
294
343
392
441
489

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
330.9 330.9 33% 8.531e-101 97% YP_004940641

Alignments

MET/HEL gene product [Grapevine leafroll-associated virus 1]

Sequence ID: ref|YP_004940641.1| Length: 2204 Number of Matches: 1

See 1 more title(s)

Range 1: 1706 to 1867 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
330.9 bits(847) 0.0 157/162(97%) 0/162(0%) Plus/Plus
Query        2  VRQSVSKTTIGTAVEMGCIDKDSWVLGEDPVLGIQSFNDVVYCKDLKAAGTEAPAIEFIMYLARRCFDLFIKLKRARDLVAKTDKRVGHKFPLAVYENLPGLRVYDANFKAVANAPEDGTTIFDLEYVFLVSTGTFVPGRNLQAVLSRQDAVLVCDDLLVFH  487
                VRQS SK+TIGTAVEMGCIDKDSWVLGEDPVLGIQSFNDVVYCKDLK AGTEAPAIEFIMYLARRCFDLFIKLKRARDLVAKTDKRVGHKFPLAVYENLPGLRVYDANFK VANAPEDGTTIFDLEYVFLVSTGTFVPGRNL+AVLSRQDAVLVCDDLLVFH
Subject   1706  VRQSASKSTIGTAVEMGCIDKDSWVLGEDPVLGIQSFNDVVYCKDLKTAGTEAPAIEFIMYLARRCFDLFIKLKRARDLVAKTDKRVGHKFPLAVYENLPGLRVYDANFKVVANAPEDGTTIFDLEYVFLVSTGTFVPGRNLEAVLSRQDAVLVCDDLLVFH  1867

Nucleotide Sequence (345 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 16 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
35
70
105
140
175
210
245
280
315
345

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
208.0 208.0 31% 2.553e-63 92% ADI46630

Alignments

RNA-dependent RNA polymerase, partial [Grapevine leafroll-associated virus 1]

Sequence ID: gb|ADI46630.1| Length: 332 Number of Matches: 1

Range 1: 99 to 204 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
208.0 bits(528) 0.0 98/106(92%) 0/106(0%) Plus/Plus
Query        1  RSSMAKQSLWARLRSFVYDLSAMTRYKLMVKADAKPKLDSTPLQQYVTGQNIVYHDRAITAMFSHIFTQAVERLKYVLQSRVLAYHGMSTDDFSREVRERLGDISA  318
                RSSMAKQSLWARLRSFVY LSAMTRYKLMVK+DAKPKLDSTPLQQYVTGQNIVYHDRAITAMFSHIFTQAVERLKYVLQ++VLAYHGMST+DFSREV ERLGD+S 
Subject     99  RSSMAKQSLWARLRSFVYGLSAMTRYKLMVKSDAKPKLDSTPLQQYVTGQNIVYHDRAITAMFSHIFTQAVERLKYVLQAKVLAYHGMSTEDFSREVGERLGDVSG  204

Nucleotide Sequence (325 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 16 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
33
66
99
132
165
198
231
264
297
325

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
187.6 187.6 32% 5.972e-55 89% ABM05860

Alignments

replicase, partial [Grapevine leafroll-associated virus 1]

Sequence ID: gb|ABM05860.1| Length: 381 Number of Matches: 1

Range 1: 34 to 138 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
187.6 bits(475) 0.0 93/105(89%) 0/105(0%) Plus/Plus
Query       10  VLGVFGYVAFHDAMNLRGCVRLAKRALVGEYMKSVRLSAVNSPPGGGKTTRLVDEYFGRKKRAKIATANTGSAADINSAIRAREGKKEVDLVAKTANSWIVNSRP  324
                VL     + FHDAMNLRGCV LAKRALVGEY KSV+LSAVNSPPGGGKTTRLVDEYFGRKKRAKIATANTGSAADINSAI+AREGKKE DLVAKTANSWIVNSRP
Subject     34  VLVCDDLLVFHDAMNLRGCVGLAKRALVGEYTKSVKLSAVNSPPGGGKTTRLVDEYFGRKKRAKIATANTGSAADINSAIQAREGKKEPDLVAKTANSWIVNSRP  138

Nucleotide Sequence (388 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 16 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
39
78
117
156
195
234
273
312
351
388

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
212.2 212.2 28% 7.927e-60 96% ANP22157

Alignments

methyl transferase/helicase [Grapevine leafroll-associated virus 1]

Sequence ID: gb|ANP22157.1| Length: 2204 Number of Matches: 1

Range 1: 372 to 481 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
212.2 bits(539) 0.0 106/110(96%) 0/110(0%) Plus/Plus
Query        2  IAVKGGQQSLVASVSNALNQEDLFEGIVSTIANRLVLKEGSTLVTHLDEKISELFMMKEDTLEKKNKCVVTVALSAGAKESLTRAFPELFITFLDSVSSSHSLCNAVLSC  331
                +A KGGQQSLVASVSNALNQEDLFEGIVSTIANRLVLKEGSTLVTHLDEKISELFMMKEDTL KKNKCVVTVALSAGAKESLTRAFPELFITFLDSVSSSHSLCNAV SC
Subject    372  MAAKGGQQSLVASVSNALNQEDLFEGIVSTIANRLVLKEGSTLVTHLDEKISELFMMKEDTLGKKNKCVVTVALSAGAKESLTRAFPELFITFLDSVSSSHSLCNAVRSC  481

Nucleotide Sequence (909 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 16 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
91
182
273
364
455
546
637
728
819
909

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
500.7 500.7 30% 1.77e-172 88% AAF22743

Alignments

p55 [Grapevine leafroll-associated virus 1]

Sequence ID: gb|AAF22743.1|AF195822_7 Length: 500 Number of Matches: 1

Range 1: 1 to 277 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
500.7 bits(1288) 0.0 244/277(88%) 0/277(0%) Plus/Plus
Query       75  MATALVAPIVGDKGECLALLRNLPNDESPDSWLPNAGRMNDDFFRVGEAYRLQNLSIGYTINVSVAIKSLPKETMGVLRVVIEPRDGDIVIHTIRFYRDKNLIEQIYTQRKGGVSGVLKSRPVDASIVNFHSERNEKMTSIVNKQTRLMEVQTNGSSLGTSQVKVPVDSLITVLVSLESKKMSCDKLFELIPTEVGSIIKFDGTVDYKEIVRVRKYIFPYKTFRDSKYWELLNEAIAARNETAATQPETEVTPAHPTADVIYVTPPEGVTITNTATP  905
                MATALVAPIVGDKGE LALLRNLPNDES DSWLPNAGRMNDDF RVGEAYRLQNLSIGYTINVSV+IKS+PKETMGVLRVVIEPRDGDI+IHTIRFYRDKNLIEQ+YTQRKGGVS VLKSRPVDASIVNFHSERNEKMTS+VNKQTRLMEVQTNGSSLGTSQ+KVPV+SLITVLVSLESKK+SCD L  +IPTEV SII+FDGT+DYK+I R RKYIFPYKTFRDSKY E L EAIAA NETAATQPETE  PAHPT +V YVTPPEGV ITN ATP
Subject      1  MATALVAPIVGDKGEYLALLRNLPNDESLDSWLPNAGRMNDDFSRVGEAYRLQNLSIGYTINVSVSIKSIPKETMGVLRVVIEPRDGDILIHTIRFYRDKNLIEQVYTQRKGGVSSVLKSRPVDASIVNFHSERNEKMTSMVNKQTRLMEVQTNGSSLGTSQIKVPVESLITVLVSLESKKVSCDTLSGMIPTEVSSIIRFDGTIDYKDIDRERKYIFPYKTFRDSKYREFLTEAIAALNETAATQPETEAIPAHPTTNVTYVTPPEGVAITNVATP  277

Nucleotide Sequence (646 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 16 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
65
130
195
260
325
390
455
520
585
646

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
365.2 365.2 32% 1.374e-121 85% ANP22154

Alignments

coat protein duplicate 2 [Grapevine leafroll-associated virus 1]

Sequence ID: gb|ANP22154.1| Length: 440 Number of Matches: 1

Range 1: 64 to 268 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
365.2 bits(936) 0.0 174/205(85%) 0/205(0%) Minus/Plus
Query        4  FGGSHGAKLRPFVYYGNSYYYNERMTPTEISRDIFDYVDIEINLNLSKKNVVTAASVNGIDMPCLGYALKNGSLRFGHEIIFHVIDDDLHYLVDTSTRNKRIEGLYTESKIKVDDGDVLLRDVEMAGRRLERIYSNNKGVEPSVHVMNVRGWKTLFEITASVTTTDVRHEKFENSMLYYEVFDKNLEDVAKACSYSEIPNATVAG  618
                FGGSHGAKLRPFVYYG SYYYNERMTPTEIS D+ DYVDIEI+LNLSKK+VVTAASVNGIDMPCLGY LKNGSLRFGHEIIFHVI DDLHYL+D STRNKRIEGLYTESKIKVDDGDVLL D+EMAG R +R YSNNKGVEPSVHV NVR W+TLF+IT+SVTTTDV +   EN+MLYYEVFDKNLEDVAK C YSEIPN  VAG
Subject     64  FGGSHGAKLRPFVYYGGSYYYNERMTPTEISTDMLDYVDIEISLNLSKKSVVTAASVNGIDMPCLGYTLKNGSLRFGHEIIFHVIGDDLHYLIDKSTRNKRIEGLYTESKIKVDDGDVLLGDIEMAGNRSDRAYSNNKGVEPSVHVTNVRDWRTLFDITSSVTTTDVAYPTIENAMLYYEVFDKNLEDVAKVCGYSEIPNVAVAG  268

Nucleotide Sequence (567 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 16 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
57
114
171
228
285
342
399
456
513
567

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
352.8 352.8 32% 8.914e-118 88% AAF22737

Alignments

helicase, partial [Grapevine leafroll-associated virus 1]

Sequence ID: gb|AAF22737.1|AF195822_1 Length: 398 Number of Matches: 1

Range 1: 164 to 345 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
352.8 bits(904) 0.0 161/182(88%) 0/182(0%) Minus/Plus
Query        1  IDEVYMLHKGMFQLTVVSMGVKEVVVYGDKNQIPFINREKTFVTPNESVEFADEQIEYTDVSYRCPADVCYVLSSMTDSRGKRLYPNGVYPNGDTRPLRSFEKVPIATPEDALLYEADVYLTMTQNEKAEMQRAVAKMDIAAGKRRPDVLTTHEAQGKTYRDVVLVRLKKAEDPIFSRQPHI  546
                IDEVYMLHKGMFQLTVVSMGVKEV+ YGDKNQIPFINREKTFVTPNE+VEFA+EQI+YTD+SYRCPADVCYVLSSMTD+RGK++YPNGV+PNGD RPLRSFEKVPIATPEDALLYEADVYLTMTQNEKAEMQ+AVAKM++ AGK+RPDV+TTHEAQGKTY +VVLVRLKKA+DPIFSR+PHI
Subject    164  IDEVYMLHKGMFQLTVVSMGVKEVIAYGDKNQIPFINREKTFVTPNEAVEFAEEQIDYTDISYRCPADVCYVLSSMTDARGKKMYPNGVFPNGDVRPLRSFEKVPIATPEDALLYEADVYLTMTQNEKAEMQKAVAKMEVVAGKKRPDVITTHEAQGKTYENVVLVRLKKADDPIFSRKPHI  345

Nucleotide Sequence (493 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 16 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
50
100
150
200
250
300
350
400
450
493

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
279.3 279.3 31% 9.862e-92 99% AET99013

Alignments

coat protein, partial [Grapevine leafroll-associated virus 1]

Sequence ID: gb|AET99013.1| Length: 228 Number of Matches: 1

Range 1: 39 to 193 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
279.3 bits(713) 0.0 153/155(99%) 0/155(0%) Minus/Plus
Query       27  LLDANVFVKGPGGYSLRQSRPSTGQRLGDTEVARREMGDKLKRTFNIAEIFTNPEMNIIFEPPKDMEXXXXXXXXXXXXXXXVATAISTELKNLCAEVMGNTDQKSLTDFFLAMLQLMLTFSTSPDTESKEEYFVNLYSNGERKLTYEKVKGAIV  491
                L DANVFVKGPGGYSLRQSRPSTGQRLGD+EVARREMGDKLKRTFNIAEIFTNPEMNIIFEPPKDMEVSVVVPTGPGLVTPAVATAISTELKNLCAEVMGNTDQKSLTDFFLAMLQLMLTFSTSPDTESKEEYFVNLYSNGERKLTYEKVKGAIV
Subject     39  LPDANVFVKGPGGYSLRQSRPSTGQRLGDSEVARREMGDKLKRTFNIAEIFTNPEMNIIFEPPKDMEVSVVVPTGPGLVTPAVATAISTELKNLCAEVMGNTDQKSLTDFFLAMLQLMLTFSTSPDTESKEEYFVNLYSNGERKLTYEKVKGAIV  193

Nucleotide Sequence (489 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 16 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
49
98
147
196
245
294
343
392
441
489

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
125.2 125.2 23% 4.41e-29 55% YP_004940641

Alignments

MET/HEL gene product [Grapevine leafroll-associated virus 1]

Sequence ID: ref|YP_004940641.1| Length: 2204 Number of Matches: 1

See 1 more title(s)

Range 1: 1430 to 1542 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
125.2 bits(313) 0.0 62/113(55%) 0/113(0%) Minus/Plus
Query      131  YLCVSPIRAEGGGASPSGCKTADGRSRAEGDSLEXXXXXXXXSGIAPARNEELLSQDVGKSQKKEKFLGARELISGDIFVDKLRGRDVAFYSKYSRRYDYNGGSHVSQGWHKS  469
                YLC+S  + E G ASPSGCK+AD +S +E        S+ ++  + P + E    ++V  + ++EKF GAR+L+S DIFVDKLRGRDVAFYSKYSRRY YNGGSH SQGW+K+
Subject   1430  YLCLSSTKVERGDASPSGCKSADCKSISEESPERKTKSSAIIEDVTPVKVEVSAPRNVQTAMEREKFKGARKLVSSDIFVDKLRGRDVAFYSKYSRRYVYNGGSHASQGWNKA  1542

Nucleotide Sequence (326 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 16 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
33
66
99
132
165
198
231
264
297
326

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
160.2 160.2 32% 4.283e-42 85% YP_004940641

Alignments

MET/HEL gene product [Grapevine leafroll-associated virus 1]

Sequence ID: ref|YP_004940641.1| Length: 2204 Number of Matches: 1

See 1 more title(s)

Range 1: 1369 to 1473 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
160.2 bits(404) 0.0 89/105(85%) 0/105(0%) Minus/Plus
Query        4  RCIVDKGKKVVDYDEELNMRKEKRRLSMEKRREEHGGLIPVVFKEPKCERQXXXXXXXXEGYLCLSSSKVERGEATPSGCKSADGKCISEESPERKTESSAIIKE  318
                R IVDKGKKVVDYDEELNMRKEK RL +EKRREEHGGLIPVVFKEPKCE +DD+S+EESEGYLCLSS+KVERG+A+PSGCKSAD K ISEESPERKT+SSAII++
Subject   1369  RRIVDKGKKVVDYDEELNMRKEKCRLIIEKRREEHGGLIPVVFKEPKCEGKDDESEEESEGYLCLSSTKVERGDASPSGCKSADCKSISEESPERKTKSSAIIED  1473

Nucleotide Sequence (839 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 16 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
84
168
252
336
420
504
588
672
756
839

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
528.5 528.5 32% 7.256e-169 94% YP_004940641

Alignments

MET/HEL gene product [Grapevine leafroll-associated virus 1]

Sequence ID: ref|YP_004940641.1| Length: 2204 Number of Matches: 1

See 1 more title(s)

Range 1: 533 to 802 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
528.5 bits(1360) 0.0 253/270(94%) 0/270(0%) Minus/Plus
Query        1  VRLTTAEERAMTVESVMKNEAAKNITYCQMDTRMCEHKARVGFMVDVYDLDVFELAQALEKKDIKIFELCLMFPIELTARDGGLTIPELGVEVSRKGDVILYTVGGVGDAYAHSVSKIISFFGSNVVQLPSGSAYSVEYVGYRLGYHQFSLCVIDTAYASYNLTRKVSTTFKGHSLVMIPEIADGFLSFRQMYLDSDFVDRVYSYLLNTTSTFVDRTFEYAVSCARSQKTHVIVGTRVVHDKVELSPEEQWGLVVALMIQAITDRKKAHV  810
                +RL TAEE+ MTVESV+K EAAKNITYCQMDTR C+HKA VGFMVDVYDLDVFELAQALEKKDIKIFELCLMFPIELTARDG LTIPELGVEV RKGDVI+YTVGGVGDAY HSV KIISFFGSNVVQLPSGSA+SVEYVGYRLGYHQFSLCVIDTA+ASYNLTRKVSTTFKGHSLVMIPEIADGFLSFRQMYLDSDFVDRVYSYLLNTTS FVDRTFEYAVSCARSQKTHVIVGTRVVHDKVELSPEEQWGLVVALMIQAITDRKKAHV
Subject    533  LRLATAEEKVMTVESVLKKEAAKNITYCQMDTRFCDHKAPVGFMVDVYDLDVFELAQALEKKDIKIFELCLMFPIELTARDGSLTIPELGVEVVRKGDVIMYTVGGVGDAYTHSVQKIISFFGSNVVQLPSGSAFSVEYVGYRLGYHQFSLCVIDTAHASYNLTRKVSTTFKGHSLVMIPEIADGFLSFRQMYLDSDFVDRVYSYLLNTTSAFVDRTFEYAVSCARSQKTHVIVGTRVVHDKVELSPEEQWGLVVALMIQAITDRKKAHV  802