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Queries

Nucleotide Sequence (421 letters)

Query ID:ds2016-58_48
Query definition:No definition line
Query length:589
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 13 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
43
86
129
172
215
258
301
344
387
421

Descriptions

Alignments

Rupestris stem pitting associated virus 1, complete genome

Sequence ID: AF057136.1 Length: 8744 Number of Matches: 6

Range 1: 1193 to 1561 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
260.0 bits(561) 0.0 104/123(85%) 0/123(0%) Minus/Plus
Query       27  GSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVSLIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGNVHFNRQRAPYSLGVSHWLNSPFSVEHKFAGAIS  395
                GSLLMPNISKLVISF CRMMPNALARLSSSFRE SLDSFVY+LEPFNFSV+L+D+TPDFFEHLFLFSCLNELIEED+EEVMD+SWFGLG++ FNRQRAP+ LG S+WLNS FSVEHKF+G I+
Subject   1193  GSLLMPNISKLVISFFCRMMPNALARLSSSFRECSLDSFVYSLEPFNFSVNLVDITPDFFEHLFLFSCLNELIEEDVEEVMDNSWFGLGDLQFNRQRAPFFLGSSYWLNSKFSVEHKFSGTIN  1561

Range 2: 1192 to 1560 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
166.9 bits(358) 0.0 84/123(68%) 0/123(0%) Plus/Minus
Query       28  LMAPANLCSTENGELSQCDTPSEYGAL*RLKCTLPSPNHELXXXXXXXXXXXXLRQENKNRCSKKSGVTSIRLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREP  396
                LM P NLCSTEN ELSQ + P + GAL RL C  PSPN ELS+TSS SSSI+S RQE +N+CSKKSGV S +LTEKLKGS   TNESSE SRKLE++LA A GIIR KND+T+ E+LGI++EP
Subject   1192  LMVPENLCSTENLELSQYEDPRKNGALWRLNCKSPSPNQELSMTSSTSSSINSFRQEKRNKCSKKSGVISTKLTEKLKGSSEYTNESSEHSRKLEESLASAFGIIRQKNDMTNLEMLGISKEP  1560

Range 3: 1184 to 1558 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
108.7 bits(231) 0.0 56/125(45%) 0/125(0%) Plus/Minus
Query       30  DGTCKLMLDREWRVKPV*YP**IWSPLTVKVHIAKSKP*TIHNLLNVLFNQLIEAGEQK*VLKEIRGHIYQANRKIERLKGVDKRVK*SFAET*RQPG*GIRHHPTQK*YHQL*NIRHQ*GTTLP  404
                DG  KL+L+ ++ V+P+* P     PL +++ + KSKP  +H+L NVL +QLI AGE+K*+LKEIR +I+  N KI+ LK V K +  + ++  R+PG  I HHP ++*Y QL N+ H+   T P
Subject   1184  DGA*KLVLN*KFGVEPI*RPKKERGPLAIEL*VPKSKPRIVHDLFNVLLDQLI*AGEEK*MLKEIRSYIH*INGKIKGLK*VHK*I*RTLSKARREPGECIWHHPAKE*YDQLRNVGHKQRATPP  1558

Range 4: 1206 to 1559 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
94.1 bits(199) 0.0 55/118(47%) 0/118(0%) Minus/Plus
Query       29  CLIFQSW*YHFCVG*CLMP*PGCLQVSAKLHLTRLSTPLSLSIFRLA**M*PLISLSTYFCSPASMS*LKRTLRRLWIVHGLDLAMCTLTVRGLHIH*GYHTGLTLHSLSSISLQVPS  382
                C  F SW YH   G*C M  PG L     +    L T LS  IF L * +* LISLS YF SPA MS* +RTL+R W + GLDL       RG     G H G T +   S S Q PS
Subject   1206  CPTFLSWSYHSFAG*CQMHSPGSLLAFESVR*IHLCTHLSPLIFPLI*WI*LLISLSIYFSSPA*MS*SRRTLKRSWTILGLDLGTYNSIARGPRSFLGLHIGSTPNFQLSTSFQAPS  1559

Range 5: 1192 to 1581 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
85.8 bits(181) 0.0 52/130(40%) 0/130(0%) Minus/Plus
Query        7  WFPIDA*YFKAGDIIFVSDDA*CLSQVVFKFPRNFT*LVCLRP*AFQFFG*PDRCDP*FL*APIFVLLPQ*AD*RGH*GGYG*FMVWTWQCAL*PSEGSIFTRGITLA*LSILCRA*VCRCHQPTKHTQH  396
                W    A +F  G II + DDA C  Q +F   R F   +C+  *A  FF *    + *FL*A I +LLP+* D  G * G+G F+VWTW   +   EG + +    LA L I   A V R HQ + H  +
Subject   1192  WLFAYAQHF*VGHIILLPDDAKCTRQALF*LSRVFARFICVLT*AL*FFR*FSGYNS*FL*AFISLLLPK*VDRGGR*RGHGQFLVWTWGLTIQSPEGPVLSWVFILAQLQIFS*AQVFRHHQFSNHASY  1581

Range 6: 1215 to 1559 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.7 bits(161) 0.0 49/115(43%) 0/115(0%) Plus/Minus
Query       29  *WHLQTYARQRMES*ASVIPLVNMEPSDG*SAHCQVQTMNYP*PPQCPLQSAH*GRRTKIGAQRNQGSHLSG*PKN*KAQGRRQTSQVKFRGNLKTTWLRH*ASSDTKMISPALK  373
                *W L+T A+ ++ S*A++       PS  *    QVQT N P*P Q P +S H GRR +I AQRNQ  +   * KN*+AQ   Q +      + K  W  H ASS  +MI P  K
Subject   1215  *WCLKTCAQLKIWS*ANMKTQERTGPSGD*IVSPQVQTKNCP*PLQRPPRSTHLGRRREINAQRNQELYPLN*RKN*RAQVSTQMNLANTLES*KRAWRVHLASSGKRMI*PT*K  1559

Grapevine rupestris stem pitting associated virus isolate SK704 A, complete genome

Sequence ID: KX274274.1 Length: 8725 Number of Matches: 6

Range 1: 1192 to 1560 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
292.5 bits(632) 0.0 120/123(98%) 0/123(0%) Minus/Plus
Query       27  GSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVSLIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGNVHFNRQRAPYSLGVSHWLNSPFSVEHKFAGAIS  395
                GSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSV+LIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGNVHFNRQRAPYSLG+SHWLNSPFSVEHKFAGAI+
Subject   1192  GSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGNVHFNRQRAPYSLGISHWLNSPFSVEHKFAGAIN  1560

Range 2: 1179 to 1562 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
263.2 bits(568) 0.0 112/128(88%) 0/128(0%) Minus/Plus
Query       25  LEVRWFPIDA*YFKAGDIIFVSDDA*CLSQVVFKFPRNFT*LVCLRP*AFQFFG*PDRCDP*FL*APIFVLLPQ*AD*RGH*GGYG*FMVWTWQCAL*PSEGSIFTRGITLA*LSILCRA*VCRCHQP  408
                L   WFPIDA YFKAGDIIFVSDDA*CL Q++FKFPRNFT*L+CLR * FQFFG* DRCDP*FL*APIF+LLPQ*AD*RG+*GGYG*FMVWTWQCAL*PSEGSIFTR ITLA*L ILC A*VCRCHQP
Subject   1179  LWAEWFPIDAQYFKAGDIIFVSDDA*CLGQIIFKFPRNFT*LICLRS*TFQFFG*LDRCDP*FL*APIFILLPQ*AD*RGY*GGYG*FMVWTWQCAL*PSEGSIFTRDITLA*LPILC*A*VCRCHQP  1562

Range 3: 1190 to 1561 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
251.2 bits(542) 0.0 111/124(90%) 0/124(0%) Plus/Minus
Query       26  G*WHLQTYARQRMES*ASVIPLVNMEPSDG*SAHCQVQTMNYP*PPQCPLQSAH*GRRTKIGAQRNQGSHLSG*PKN*KAQGRRQTSQVKFRGNLKTTWLRH*ASSDTKMISPALKY*ASIGNH  397
                G*WHLQTYA+QRM S*ASVI LVNMEPSDG*SAHCQVQTMNYP*PPQ PLQSAH*GRR KIGAQRNQGSHLS *PKN*K Q RRQ SQVKFRGNLK  W RH*ASSDTKMISPALKY ASIGNH
Subject   1190  G*WHLQTYAQQRMGS*ASVISLVNMEPSDG*SAHCQVQTMNYP*PPQYPLQSAH*GRRIKIGAQRNQGSHLSS*PKN*KVQERRQMSQVKFRGNLKIIWPRH*ASSDTKMISPALKYWASIGNH  1561

Range 4: 1191 to 1559 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
249.9 bits(539) 0.0 120/123(98%) 0/123(0%) Plus/Minus
Query       28  LMAPANLCSTENGELSQCDTPSEYGAL*RLKCTLPSPNHELXXXXXXXXXXXXLRQENKNRCSKKSGVTSIRLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREP  396
                LMAPANLCSTENGELSQCD PSEYGAL*RLKCTLPSPNHELSITSS+SSSISSLRQENKNRCSKKSGVTSI+LTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREP
Subject   1191  LMAPANLCSTENGELSQCDIPSEYGAL*RLKCTLPSPNHELSITSSISSSISSLRQENKNRCSKKSGVTSIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREP  1559

Range 5: 1183 to 1557 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
249.9 bits(539) 0.0 112/125(90%) 0/125(0%) Plus/Minus
Query       30  DGTCKLMLDREWRVKPV*YP**IWSPLTVKVHIAKSKP*TIHNLLNVLFNQLIEAGEQK*VLKEIRGHIYQANRKIERLKGVDKRVK*SFAET*RQPG*GIRHHPTQK*YHQL*NIRHQ*GTTLP  404
                DGTCKLML+REW VKPV*YP**IWSPLTVKVHIAKSKP*TIHNLLN+LFNQLIEAGE K*VLKEIRGHIYQ NRKIER K VDK VK*SFAET*R  G GIRHHPTQK*YHQL*NI HQ*GTT P
Subject   1183  DGTCKLMLNREWGVKPV*YP**IWSPLTVKVHIAKSKP*TIHNLLNILFNQLIEAGE*K*VLKEIRGHIYQVNRKIERFKSVDK*VK*SFAET*R*SGQGIRHHPTQK*YHQL*NIGHQ*GTTPP  1557

Range 6: 1184 to 1558 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
249.0 bits(537) 0.0 112/125(90%) 0/125(0%) Minus/Plus
Query       29  GKVVPY*CLIFQSW*YHFCVG*CLMP*PGCLQVSAKLHLTRLSTPLSLSIFRLA**M*PLISLSTYFCSPASMS*LKRTLRRLWIVHGLDLAMCTLTVRGLHIH*GYHTGLTLHSLSSISLQVPS  403
                G VVPY*C IFQSW*YHFCVG*CLMP P  LQVSAKLHLT LST L+LSIFRL **M*PLISLSTYF SPASMS*LKR LRRLWIVHGLDLAMCTLTVRGLHIH*GYHTGLT HSL SISLQVPS
Subject   1184  GGVVPY*CPIFQSW*YHFCVG*CLMPWPDYLQVSAKLHLTHLSTLLNLSIFRLT**M*PLISLSTYFYSPASMS*LKRILRRLWIVHGLDLAMCTLTVRGLHIH*GYHTGLTPHSLLSISLQVPS  1558

Grapevine rupestris stem pitting associated virus isolate VF1, partial genome

Sequence ID: KT948710.1 Length: 8716 Number of Matches: 6

Range 1: 1193 to 1561 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
281.5 bits(608) 0.0 117/123(95%) 0/123(0%) Minus/Plus
Query       27  GSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVSLIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGNVHFNRQRAPYSLGVSHWLNSPFSVEHKFAGAIS  395
                GSLLMPNISKLVISFLCRMMPN LARLSSSFRETSLDSFVYALEPFNFSV+LIDVTPDFFEHLFLFSC NELIEEDIEEVMDSSWFGLGNV+FNRQRAPYSLGVSHWLNSPFSVE KFAGAI+
Subject   1193  GSLLMPNISKLVISFLCRMMPNVLARLSSSFRETSLDSFVYALEPFNFSVNLIDVTPDFFEHLFLFSCRNELIEEDIEEVMDSSWFGLGNVYFNRQRAPYSLGVSHWLNSPFSVESKFAGAIN  1561

Range 2: 1192 to 1560 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
236.1 bits(509) 0.0 116/123(94%) 0/123(0%) Plus/Minus
Query       28  LMAPANLCSTENGELSQCDTPSEYGAL*RLKCTLPSPNHELXXXXXXXXXXXXLRQENKNRCSKKSGVTSIRLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREP  396
                LMAPANL STENGELSQCDTPSEYGAL*RLK TLPSPNHELSITSSMSSSISSLRQENKNRCSKKSGVTSI+LTEKLKGSRA*TNESSEVSRKLED+LA+ LGIIRHKNDITSFE+LGINREP
Subject   1192  LMAPANLLSTENGELSQCDTPSEYGAL*RLKYTLPSPNHELSITSSMSSSISSLRQENKNRCSKKSGVTSIKLTEKLKGSRA*TNESSEVSRKLEDSLARTLGIIRHKNDITSFEMLGINREP  1560

Range 3: 1184 to 1558 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
231.1 bits(498) 0.0 103/125(82%) 0/125(0%) Plus/Minus
Query       30  DGTCKLMLDREWRVKPV*YP**IWSPLTVKVHIAKSKP*TIHNLLNVLFNQLIEAGEQK*VLKEIRGHIYQANRKIERLKGVDKRVK*SFAET*RQPG*GIRHHPTQK*YHQL*NIRHQ*GTTLP  404
                DGTCKL L+REWRVKP+*YP**IWSPLTVKVHIA SKP*TIH LLNVL NQLI AGEQK*VLKEIRGHIYQ N +IER K +DK +K*SF ET*RQPG* I HH TQK*YHQL*N+ HQ*GTT P
Subject   1184  DGTCKLALNREWRVKPM*YP**IWSPLTVKVHIA*SKP*TIHYLLNVLLNQLIAAGEQK*VLKEIRGHIYQVN*EIERFKSIDK*IK*SFTET*RQPG*DIGHHSTQK*YHQL*NVGHQ*GTTPP  1558

Range 4: 1191 to 1562 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
228.3 bits(492) 0.0 100/124(81%) 0/124(0%) Plus/Minus
Query       26  G*WHLQTYARQRMES*ASVIPLVNMEPSDG*SAHCQVQTMNYP*PPQCPLQSAH*GRRTKIGAQRNQGSHLSG*PKN*KAQGRRQTSQVKFRGNLKTTWLRH*ASSDTKMISPALKY*ASIGNH  397
                G*WHLQT ++QRMES*A+VIPLVNMEPSDG*S HC VQTMNYP PPQCP QSAH GRRTKIGAQRNQGSHLS * +N*K Q  RQ +QVKF GNLKT WL H AS DTKMISPALK  ASIGNH
Subject   1191  G*WHLQTCSQQRMES*ANVIPLVNMEPSDG*STHCLVQTMNYPLPPQCPPQSAHCGRRTKIGAQRNQGSHLSS*LRN*KVQEHRQMNQVKFHGNLKTAWLGHWASFDTKMISPALKCWASIGNH  1562

Range 5: 1180 to 1563 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
227.4 bits(490) 0.0 103/128(80%) 0/128(0%) Minus/Plus
Query       25  LEVRWFPIDA*YFKAGDIIFVSDDA*CLSQVVFKFPRNFT*LVCLRP*AFQFFG*PDRCDP*FL*APIFVLLPQ*AD*RGH*GGYG*FMVWTWQCAL*PSEGSIFTRGITLA*LSILCRA*VCRCHQP  408
                L   WFPIDA +FKAGDIIFVS+DA C SQ VFKFP NFT* +CL  * FQF  * DRCDP*FL*APIFVLLPQ*AD* GH*GG G*FMVWT QC L*PSEGSIFTRGITLA*LSILC   VCRCHQP
Subject   1180  LWAEWFPIDAQHFKAGDIIFVSNDAQCPSQAVFKFP*NFT*FICLCS*TFQFLS*LDRCDP*FL*APIFVLLPQ*AD*GGH*GGNG*FMVWTRQCVL*PSEGSIFTRGITLA*LSILC*EQVCRCHQP  1563

Range 6: 1185 to 1559 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
227.4 bits(490) 0.0 102/125(82%) 0/125(0%) Minus/Plus
Query       29  GKVVPY*CLIFQSW*YHFCVG*CLMP*PGCLQVSAKLHLTRLSTPLSLSIFRLA**M*PLISLSTYFCSPASMS*LKRTLRRLWIVHGLDLAMCTLTVRGLHIH*GYHTGLTLHSLSSISLQVPS  403
                G VVPY*C  FQSW*YHFCV *C M *PGCLQVS KLHL  LS  L+LSI +L **M*PLISLSTYFCSPA+MS*L+RTLRR WIVHGLD AMCTLTVRGLHIH*GYH GLTLHSL   SLQVPS
Subject   1185  GGVVPY*CPTFQSW*YHFCVE*CPMS*PGCLQVSVKLHLIHLSMLLNLSISQLT**M*PLISLSTYFCSPAAMS*LRRTLRR*WIVHGLD*AMCTLTVRGLHIH*GYHIGLTLHSLLRASLQVPS  1559

Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome

Sequence ID: KR054734.1 Length: 8753 Number of Matches: 6

Range 1: 1192 to 1560 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
276.9 bits(598) 0.0 112/123(91%) 0/123(0%) Minus/Plus
Query       27  GSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVSLIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGNVHFNRQRAPYSLGVSHWLNSPFSVEHKFAGAIS  395
                GSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFV+ALEPFNFSV+LID+TPDFFEHLFLFSCLNELI EDIEE MD SWFGLGN+HFNRQRAPYSLGVSHW+ SPFSVEHKFAG I+
Subject   1192  GSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVHALEPFNFSVNLIDITPDFFEHLFLFSCLNELIAEDIEEAMDGSWFGLGNLHFNRQRAPYSLGVSHWIKSPFSVEHKFAGVIN  1560

Range 2: 1191 to 1559 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
235.7 bits(508) 0.0 112/123(91%) 0/123(0%) Plus/Minus
Query       28  LMAPANLCSTENGELSQCDTPSEYGAL*RLKCTLPSPNHELXXXXXXXXXXXXLRQENKNRCSKKSGVTSIRLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREP  396
                LM PANLCSTENG+L QCDTP EYGAL*RLKC LPSPNHE SI SS+SS+ISSLRQENKNRCSKKSGV SI+LTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREP
Subject   1191  LMTPANLCSTENGDLIQCDTPREYGAL*RLKCKLPSPNHEPSIASSISSAISSLRQENKNRCSKKSGVISIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREP  1559

Range 3: 1183 to 1551 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
219.2 bits(472) 0.0 97/123(79%) 0/123(0%) Plus/Minus
Query       36  TCKLMLDREWRVKPV*YP**IWSPLTVKVHIAKSKP*TIHNLLNVLFNQLIEAGEQK*VLKEIRGHIYQANRKIERLKGVDKRVK*SFAET*RQPG*GIRHHPTQK*YHQL*NIRHQ*GTTLP  404
                TCKL+L+REWR  PV*+P* IW PLTVKV IAKSKP* +H+ LN+L NQLIEAGEQK*+LKEIRG+I Q NRK+ERLK ++K VK*SFAET*RQPG*GIRHH TQK*YHQL*NIRHQ* TT P
Subject   1183  TCKLVLNREWRFDPV*HP*GIWGPLTVKVQIAKSKP*AVHSFLNILCNQLIEAGEQK*MLKEIRGNINQVNRKVERLKSMNK*VK*SFAET*RQPG*GIRHHSTQK*YHQL*NIRHQ*RTTPP  1551

Range 4: 1184 to 1552 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
210.5 bits(453) 0.0 96/123(78%) 0/123(0%) Minus/Plus
Query       35  GKVVPY*CLIFQSW*YHFCVG*CLMP*PGCLQVSAKLHLTRLSTPLSLSIFRLA**M*PLISLSTYFCSPASMS*LKRTLRRLWIVHGLDLAMCTLTVRGLHIH*GYHTGLTLHSLSSISLQV  403
                G VV Y*CLIFQSW*YHFCV *CLMP*PGCLQVSAKLHLT L   LSLS F L * + PLISLS YFCSPASMS*L+R LR+LW  HGLDLA+CTLTVRG HI *G HTG  LHSL S SLQV
Subject   1184  GGVVLY*CLIFQSW*YHFCVE*CLMP*PGCLQVSAKLHLTHLFMLLSLSTFLLT*LILPLISLSIYFCSPASMS*LQRILRKLWTAHGLDLAICTLTVRGPHIP*GCHTGSNLHSLLSTSLQV  1552

Range 5: 1179 to 1562 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
206.8 bits(445) 0.0 97/128(76%) 0/128(0%) Minus/Plus
Query       25  LEVRWFPIDA*YFKAGDIIFVSDDA*CLSQVVFKFPRNFT*LVCLRP*AFQFFG*PDRCDP*FL*APIFVLLPQ*AD*RGH*GGYG*FMVWTWQCAL*PSEGSIFTRGITLA*LSILCRA*VCRCHQP  408
                L   WF IDA*YFKAGDIIFVS+DA*CLSQVVFKFPRNFT*L+C   *AFQ F * D   P*FL*A IFVLLPQ*AD RG+*G YG  MVWTWQ AL*PSEG IF RG+TL  +SILC A VCRCH P
Subject   1179  LWAEWFSIDA*YFKAGDIIFVSNDA*CLSQVVFKFPRNFT*LICSCS*AFQLFC*LD*YYP*FL*ASIFVLLPQ*ADCRGY*GSYGRLMVWTWQFAL*PSEGPIFPRGVTLDQISILC*AQVCRCH*P  1562

Range 6: 1190 to 1561 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
206.3 bits(444) 0.0 98/124(79%) 0/124(0%) Plus/Minus
Query       26  G*WHLQTYARQRMES*ASVIPLVNMEPSDG*SAHCQVQTMNYP*PPQCPLQSAH*GRRTKIGAQRNQGSHLSG*PKN*KAQGRRQTSQVKFRGNLKTTWLRH*ASSDTKMISPALKY*ASIGNH  397
                G* HLQT A+QRME *+SV PL NM PSDG*SA+CQVQTM+ P* PQ PLQSAH*GRRTKI AQRNQG + S * K+*KAQ   Q SQVKFRGNLKTTWLRH*AS DTKMISPALKY*ASI NH
Subject   1190  G**HLQTCAQQRMEI*SSVTPLGNMGPSDG*SANCQVQTMSRP*LPQYPLQSAH*GRRTKIDAQRNQG*YQSS*QKS*KAQEHEQMSQVKFRGNLKTTWLRH*ASFDTKMISPALKY*ASIENH  1561

Rupestris stem pitting associated virus isolate RSPaV PN, complete genome

Sequence ID: AY368172.2 Length: 8743 Number of Matches: 6

Range 1: 1192 to 1560 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
269.1 bits(581) 0.0 108/123(88%) 0/123(0%) Minus/Plus
Query       27  GSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVSLIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGNVHFNRQRAPYSLGVSHWLNSPFSVEHKFAGAIS  395
                GSLLMPNISKLV SF CRMMPNALARLSSSFRE+SLDSFVYALEPFNF+V+LIDVTPDFFEHLFLFSCLNEL+EE+IEEVMD+SWFGL NVHFNRQRAPYSLG SHWL+SPFSVEHKF G ++
Subject   1192  GSLLMPNISKLVTSFFCRMMPNALARLSSSFRESSLDSFVYALEPFNFAVNLIDVTPDFFEHLFLFSCLNELMEENIEEVMDNSWFGLSNVHFNRQRAPYSLGTSHWLSSPFSVEHKFTGIVN  1560

Range 2: 1191 to 1559 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
211.8 bits(456) 0.0 104/123(85%) 0/123(0%) Plus/Minus
Query       28  LMAPANLCSTENGELSQCDTPSEYGAL*RLKCTLPSPNHELXXXXXXXXXXXXLRQENKNRCSKKSGVTSIRLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREP  396
                L  P NLCSTE GELSQC+ PSEYGAL RLK TL SPNHELSITSS+ SSI+SLRQENKNRCSKKSGVTSI+ T KLKGSRA*TNESSE SRKLED+LAKALGIIR KND+TSFEILGINREP
Subject   1191  LTIPVNLCSTEKGELSQCEVPSEYGALWRLK*TLLSPNHELSITSSIFSSINSLRQENKNRCSKKSGVTSIKFTAKLKGSRA*TNESSEDSRKLEDSLAKALGIIRQKNDVTSFEILGINREP  1559

Range 3: 1183 to 1545 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
139.9 bits(299) 0.0 68/121(56%) 0/121(0%) Plus/Minus
Query       42  KLMLDREWRVKPV*YP**IWSPLTVKVHIAKSKP*TIHNLLNVLFNQLIEAGEQK*VLKEIRGHIYQANRKIERLKGVDKRVK*SFAET*RQPG*GIRHHPTQK*YHQL*NIRHQ*GTTLP  404
                KLML+R+ R +PV*   *IWSPL ++V+IAKS+P* IHNLLN+  +Q IEAGEQK*+LK++RG+I Q   K++R K +D+ VK* F +T*    * +RHH  +K* + L*NI H * TT P
Subject   1183  KLMLNRKGRAEPV*SSQ*IWSPLAIEVNIAKSEP*IIHNLLNIFLHQFIEAGEQK*MLKKVRGNINQIYCKVKRFKSIDE*VK*RFTKT*G*SS*SVRHHSAEK*RN*L*NIGH**RTTPP  1545

Range 4: 1190 to 1543 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
126.2 bits(269) 0.0 68/118(58%) 0/118(0%) Plus/Minus
Query       44  TYARQRMES*ASVIPLVNMEPSDG*SAHCQVQTMNYP*PPQCPLQSAH*GRRTKIGAQRNQGSHLSG*PKN*KAQGRRQTSQVKFRGNLKTTWLRH*ASSDTKMISPALKY*ASIGNH  397
                TYA+Q+ ES*ASV   VNMEP   *S HC V+TMNYP*PPQ    S H*GRRTKI AQ++QG H S   ++*K Q  R+ SQVK   NL+   L+ *AS   KM   ALKY A I NH
Subject   1190  TYAQQKRES*ASVKFPVNMEPFGD*SEHC*VRTMNYP*PPQYFPPSIH*GRRTKIDAQKSQG*HQSNLLQS*KVQEHRRMSQVKIHENLRIV*LKR*ASFGRKMT*LALKYWALIENH  1543

Range 5: 1184 to 1549 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.4 bits(263) 0.0 67/122(55%) 0/122(0%) Minus/Plus
Query       38  GKVVPY*CLIFQSW*YHFCVG*CLMP*PGCLQVSAKLHLTRLSTPLSLSIFRLA**M*PLISLSTYFCSPASMS*LKRTLRRLWIVHGLDLAMCTLTVRGLHIH*GYHTGLTLHSLSSISLQ  403
                G VV Y*C IFQS   HF   *CL  *    QV   LHLT  S  L+L   +  * M PL  LS YFCSPASM+* ++ LRRLWI+HG DLAM T   +GLHIH   HTG  L  L SISL+
Subject   1184  GGVVLY*CPIFQS*LRHFSAE*CLTL*LDYPQVFVNLHLTHSSMLLNLLTLQ*I*LMLPLTFLSIYFCSPASMN*WRKILRRLWIIHGSDLAMFTSIAKGLHIHWELHTGSALPFLLSISLR  1549

Range 6: 1179 to 1544 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
113.8 bits(242) 0.0 66/122(54%) 0/122(0%) Minus/Plus
Query       43  LEVRWFPIDA*YFKAGDIIFVSDDA*CLSQVVFKFPRNFT*LVCLRP*AFQFFG*PDRCDP*FL*APIFVLLPQ*AD*RGH*GGYG*FMVWTWQCAL*PSEGSIFTRGITLA*LSILCRA*V  408
                L   WF I+A YFKA  +IF+ +DA*  S  + KF   FT*L+ L  * F      D C P*  *A IFVLLPQ* D   +*GGYG*FMV T QC+L   +GSIFT   TLA LS+ C A*V
Subject   1179  LWAEWFSINAQYFKASYVIFLPNDA*RFS*TILKFS*IFT*LIRLCS*TF*LCSKFD*CYP*LF*ASIFVLLPQ*IDGGKY*GGYG*FMVRT*QCSLQSPKGSIFTGNFTLAQLSLFC*A*V  1544

Nucleotide Sequence (915 letters)

Query ID:ds2016-58_48
Query definition:No definition line
Query length:589
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 13 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
92
184
276
368
460
552
644
736
828
915

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 10

Range 1: 3766 to 4680 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
723.2 bits(1572) 0.0 303/305(99%) 0/305(0%) Minus/Plus
Query        1  ICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDF  915
                ICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMF+SRLPC+FKKGSMTAAFADYAIFHNMHDF
Subject   3766  ICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAIFHNMHDF  4680

Range 2: 3768 to 4679 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
658.1 bits(1430) 0.0 298/304(98%) 0/304(0%) Plus/Minus
Query        2  KSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTNLRLSKLYLYDFPSSNLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHXXXXXXXXXXEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSALSKLGKYVIFDPFRESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQ  913
                KSCILWK+A*SAKAAV+EPFLK  G+L+SNIGFTNLRLSKLYLYDFPSSNLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHSSSISRSLLIEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSALSKLGKYVIFDPFRESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQ
Subject   3768  KSCILWKMA*SAKAAVMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSNLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHSSSISRSLLIEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSALSKLGKYVIFDPFRESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQ  4679

Range 3: 3766 to 4254 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
363.5 bits(787) 0.0 155/163(95%) 0/163(0%) Plus/Minus
Query      427  IHF*VPFD*IC*SSPR*DECYKFSFRSLHEALV*ETLSSPKCAKHNCQFSLFDVRS*HSSKPRL*IVKFLITYHASQTPQQAPLKFFRPLKTWKICYL*PVQRKQVKG*SFNFSQLIHLYTLRPVTNLFDMPNVFICYVKQSRYAPARINNLNFAIDITFGTD  915
                IHF*VPFD*IC*S PR*D+CYKFSFRSLHEALV*ETLSSPKC KHNCQFSLFDVRS*HSSKPRL*IVKFLITYHASQT QQAPLKFFRPLKTWKICYL*PVQRKQVK *SFNFSQLIHLYTLRPVTNLFDMPNVFI YVKQSRYAPA INNLNF+IDITFGTD
Subject   3766  IHF*VPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCTKHNCQFSLFDVRS*HSSKPRL*IVKFLITYHASQTSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPVTNLFDMPNVFIRYVKQSRYAPAWINNLNFSIDITFGTD  4254

Range 4: 4300 to 4680 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
246.7 bits(532) 0.0 110/127(87%) 0/127(0%) Plus/Minus
Query        1  EVMHIVEDCIISKGCSH*TFFEVTWQSRFKHRIYKPPALQVVPI*LSFEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*IDVTRRE*LNFIKDHAMTSL*ACNFPKEDFKGNDIP  381
                E+MHIVE+ +ISK  SH  FFEVT  S  KH IYKP ALQVVPI*LSFEQPQYVTLF TQNSSIFLRIICALTRITSKRDESVTA+NKKT*IDVTRRE*LNFIKDHAMTSL*ACNFPKEDFKGN+IP
Subject   4300  EIMHIVENGVISKSGSHGAFFEVTG*S*IKHWIYKPSALQVVPI*LSFEQPQYVTLFGTQNSSIFLRIICALTRITSKRDESVTADNKKT*IDVTRRE*LNFIKDHAMTSL*ACNFPKEDFKGNNIP  4680

Range 5: 3768 to 4238 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
348.8 bits(755) 0.0 150/157(96%) 0/157(0%) Minus/Plus
Query      443  LCQM*CQWRN*GY*SGRAHICSV*HNK*TH*ACRKDW*RASKYKGG*AAKS*TISP*PAFSERVKDNIFSKF*EGGKTSGVLAGGFDWRDK**EI*RFKALACWSVNF*HQTKRIDSCAWHIWGWKEFPIQELHEEI*RKICNIRLT*ASSSKFNQK  913
                LCQM*CQWRN*GY*S RAHICSV*HN+*TH*ACRKDW*RASKYKGG*AAKS*TIS *PAFSERVKDNIFSKF*EGGKTSGVLAG FDWRDK**EI*RFKALACWSVNF*HQTKRIDSCAW+IWGWKEFPIQELHEEI*RKICNI LT*A SSKFNQK
Subject   3768  LCQM*CQWRN*GY*SRRAHICSV*HNE*TH*ACRKDW*RASKYKGG*AAKS*TISS*PAFSERVKDNIFSKF*EGGKTSGVLAGRFDWRDK**EI*RFKALACWSVNF*HQTKRIDSCAWYIWGWKEFPIQELHEEI*RKICNICLT*AGSSKFNQK  4238

Range 6: 4281 to 4676 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
256.3 bits(553) 0.0 114/132(86%) 0/132(0%) Minus/Plus
Query        5  QIKEGGLGCRYL*SLP*ESYRPKGWSLRDL**SSAIPSWLHRSMSSCYSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEVARRKVI*VQLGEPEVCKSDV*I*TAMSLQKRFNDCSLC*LCNLPQYA*  400
                QIKEGGLGC YL*SLP*ESYRPKGWSLRDL**SSAIPSWLHRSMSSCY Q*RFHLSCW*SLSKHI*FSKR*SYFGC TE*HIEVARRKVI*VQLGEP+VCKS+V*    + LQKR +DC  C*L + PQYA*
Subject   4281  QIKEGGLGCCYL*SLP*ESYRPKGWSLRDL**SSAIPSWLHRSMSSCYPQ*RFHLSCW*SLSKHI*FSKR*SYFGCRTE*HIEVARRKVI*VQLGEPKVCKSNV*FKITL*LQKRLHDCRFC*LRHFPQYA*  4676

Range 7: 3767 to 4255 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
340.6 bits(737) 0.0 155/163(95%) 0/163(0%) Plus/Minus
Query      426  HPFLGPF*LNLLELA*VRRMLQIFLQIXXXXXCIGNSFQPQMCQAQLSILFV*CQKLTLQQAKALNR*ISHHLSRQSNPPASTPEVFPPSQNLENMLSLTRSEKAGQGLIV*LFAAHPPLYFEARYQSFRHA*CVHLLCQTEQICARPD**PQFRH*HHIWHR  914
                HPFLGPF*LNLLE A*VR+MLQIFLQISS*SSCIGNSFQPQM QAQLSILFV*CQKLTLQQAKALNR*ISHHLSRQSN PASTPEVFPPSQNLENMLSLTRSEKAGQ LIV*LFAAHPPLYFEARYQSFRHA*CVH LCQTEQICAR D**PQF H*HHIWHR
Subject   3767  HPFLGPF*LNLLEPA*VRQMLQIFLQISS*SSCIGNSFQPQMYQAQLSILFV*CQKLTLQQAKALNR*ISHHLSRQSNLPASTPEVFPPSQNLENMLSLTRSEKAGQELIV*LFAAHPPLYFEARYQSFRHA*CVHSLCQTEQICARLD**PQFLH*HHIWHR  4255

Range 8: 4349 to 4678 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
225.1 bits(485) 0.0 92/110(84%) 0/110(0%) Plus/Minus
Query        3  SHAYCGRLHNQQRLQSLNLF*SDMAV*IQTSDLQTSGSPSCTYMTFLRATSICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQEGIAELHQRSRNDQP  332
                +HAYCG+  NQQ+ QS +LF*S   +  QT DLQT GSPSCTYMTFLRATSICHSV+HPK*LYLFENHMCFDKDHQQER*KRHC *QEDIDRCNQEGIAELHQRSRNDQP
Subject   4349  NHAYCGKWRNQQKRQSWSLF*SYRVILNQTLDLQTFGSPSCTYMTFLRATSICHSVRHPK*LYLFENHMCFDKDHQQER*KRHCG*QEDIDRCNQEGIAELHQRSRNDQP  4678

Range 9: 3767 to 4411 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
415.7 bits(901) 0.0 205/215(95%) 0/215(0%) Minus/Plus
Query      270  SVPNVMSMAKLRLLIRAGAYLLCLT*QMNTLGMSKRLVTGLKV*RWMSCEKLNDQPLTCFL*TGQR*HIFQVLRGRKNFRGACWGV*LA**VMRNLTIQSLGLLECQLLTSNKEN*QLCLAHLGLERVSYTRAS*RDLKENL*HSSHLGEL*QIQSKGT*KWMKNVXXXXXXXXXXXAGMSLPLKSSLGKLQA*RLVIA*SLMKFSYSLLVTSIY  914
                SVPNVMSM KLRLLI+AGAYLLCLT*+MNTLGMSKRLVTGLKV*RWMSCEKLNDQ LTCFL*TGQR*HIFQVLRGRKNFRGACW V*LA**VMRNLTIQSLGLLECQLLTSNKEN*QLCL HLGLERVSYTRAS*RDLKENL*H SHLG L*QIQSKGT*KWMK+VRW*RQANQRRRAGM LPLKSSLGKLQA*RLVIA*SLMKFSYSLLVTSIY
Subject   3767  SVPNVMSMEKLRLLIQAGAYLLCLT*RMNTLGMSKRLVTGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLRGRKNFRGACWEV*LA**VMRNLTIQSLGLLECQLLTSNKEN*QLCLVHLGLERVSYTRAS*RDLKENL*HLSHLGGL*QIQSKGT*KWMKSVRW*RQANQRRRAGMLLPLKSSLGKLQA*RLVIA*SLMKFSYSLLVTSIY  4411

Range 10: 4466 to 4675 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.0 bits(262) 0.0 56/70(80%) 0/70(0%) Minus/Plus
Query        6  KAHMILKKIELFWVLNRVTY*GCSKESHIGTTWRAGGL*IRCLNLDCHVTSKKVQ*LQPLLIMQSSTICM  215
                KAHMILKKIELFWV NRVTY*GCSKESHIGTTWRA GL*I+CL  D  VTSKK  *L  LLI   STICM
Subject   4466  KAHMILKKIELFWVPNRVTY*GCSKESHIGTTWRAEGL*IQCLIQDYPVTSKKAP*LPLLLITPFSTICM  4675

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 11

Range 1: 3766 to 4680 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
716.3 bits(1557) 0.0 300/305(98%) 0/305(0%) Minus/Plus
Query        1  ICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDF  915
                ICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTS IKQRELTVVLGTFGAGKSFL+KSFMKRSEGKFVTFVSPRRALANSIKRDLEMD+ECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMF+SRLPC+FKKGSMTAAFADYAIFHNMHDF
Subject   3766  ICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSGIKQRELTVVLGTFGAGKSFLHKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAIFHNMHDF  4680

Range 2: 3768 to 4679 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
637.5 bits(1385) 0.0 289/304(95%) 0/304(0%) Plus/Minus
Query        2  KSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTNLRLSKLYLYDFPSSNLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHXXXXXXXXXXEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSALSKLGKYVIFDPFRESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQ  913
                KSCILWK+A*SAKAAV++PFLK  G+L+SNIGFTNLRLSKLYLYDFPSS+LNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLR+TRRHRSM*PGGNS TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHSSSISRSLLIEFARARLGETNVTNFPSDLFMKLL RKLFPAPNVPSTTVNSLCLM EVDTPASQGFESLNFSSLITPVKPPSKHP*SFSA SKLGKYVIFDPF+ESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMS RADMRPPGLITSISPLTSHLAQ
Subject   3768  KSCILWKMA*SAKAAVMDPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSSLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRMTRRHRSM*PGGNSWTSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHSSSISRSLLIEFARARLGETNVTNFPSDLFMKLLCRKLFPAPNVPSTTVNSLCLMPEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSARSKLGKYVIFDPFKESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSKRADMRPPGLITSISPLTSHLAQ  4679

Range 3: 3766 to 4254 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
343.3 bits(743) 0.0 147/163(90%) 0/163(0%) Plus/Minus
Query      427  IHF*VPFD*IC*SSPR*DECYKFSFRSLHEALV*ETLSSPKCAKHNCQFSLFDVRS*HSSKPRL*IVKFLITYHASQTPQQAPLKFFRPLKTWKICYL*PVQRKQVKG*SFNFSQLIHLYTLRPVTNLFDMPNVFICYVKQSRYAPARINNLNFAIDITFGTD  915
                IHF VPFD*IC*S PR*D+CYKFSFRSLHEALV*ETLSSPKCAKH+CQFSLFD RS HSSKPRL*IVKFLITYHAS T QQAPLKFFRPLKTWKICYL*PVQRKQVK *SFNFSQLIHLYTLRPVTNLFDMPNVFI YVK+SRYAPA I+N NF IDITF TD
Subject   3766  IHFQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCAKHDCQFSLFDARSRHSSKPRL*IVKFLITYHAS*TSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPVTNLFDMPNVFIRYVKKSRYAPAWIDNFNFTIDITFSTD  4254

Range 4: 4300 to 4680 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
242.5 bits(523) 0.0 108/127(85%) 0/127(0%) Plus/Minus
Query        1  EVMHIVEDCIISKGCSH*TFFEVTWQSRFKHRIYKPPALQVVPI*LSFEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*IDVTRRE*LNFIKDHAMTSL*ACNFPKEDFKGNDIP  381
                E+MHIVE+ +ISKG SH   FEVT  S  KH IY+PPALQVVPI*L FEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTAN+KKT*IDVTR E*L+FIKDHAMTSL*ACNFPK+DFKGNDIP
Subject   4300  EIMHIVENGVISKGGSHGPLFEVTG*S*IKHWIYEPPALQVVPI*LPFEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANDKKT*IDVTRGE*LDFIKDHAMTSL*ACNFPKKDFKGNDIP  4680

Range 5: 3767 to 4264 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
322.3 bits(697) 0.0 148/166(89%) 0/166(0%) Minus/Plus
Query      417  SVPNVMSMAKLRLLIRAGAYLLCLT*QMNTLGMSKRLVTGLKV*RWMSCEKLNDQPLTCFL*TGQR*HIFQVLRGRKNFRGACWGV*LA**VMRNLTIQSLGLLECQLLTSNKEN*QLCLAHLGLERVSYTRAS*RDLKENL*HSSHLGEL*QIQSKGT*KWMKNV  914
                SV NVMSM KL+L I+AGAYLL LT*+MNTLGMSKRLVTGLKV*RWMSCEKLNDQ LTCFL*TGQR*HIFQVL GRKNFRGACW V*LA**VMRNLTIQSLGLLEC LL SNKEN*Q CLAHLGLERVSYTRAS*RDLKENL*H SHLG L*QIQSKGT KWM +V
Subject   3767  SVLNVMSMVKLKLSIQAGAYLLFLT*RMNTLGMSKRLVTGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLSGRKNFRGACWEV*LA**VMRNLTIQSLGLLECLLLASNKEN*QSCLAHLGLERVSYTRAS*RDLKENL*HLSHLGGL*QIQSKGTWKWMMSV  4264

Range 6: 4281 to 4676 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
244.8 bits(528) 0.0 111/132(84%) 0/132(0%) Minus/Plus
Query        5  QIKEGGLGCRYL*SLP*ESYRPKGWSLRDL**SSAIPSWLHRSMSSCYSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEVARRKVI*VQLGEPEVCKSDV*I*TAMSLQKRFNDCSLC*LCNLPQYA*  400
                QIKEGGLGCRYL*SL *ESYRPKGWSLRDL**S AIP WLHRSMSSC+SQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIE ARR+VI*VQLGEPEV KS+V*    + LQK  +DC LC*L + PQYA*
Subject   4281  QIKEGGLGCRYL*SLS*ESYRPKGWSLRDL**SPAIPPWLHRSMSSCHSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEAARREVI*VQLGEPEVRKSNV*FKITL*LQKGVHDCRLC*LRHFPQYA*  4676

Range 7: 3767 to 4255 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
317.2 bits(686) 0.0 146/163(90%) 0/163(0%) Plus/Minus
Query      426  HPFLGPF*LNLLELA*VRRMLQIFLQIXXXXXCIGNSFQPQMCQAQLSILFV*CQKLTLQQAKALNR*ISHHLSRQSNPPASTPEVFPPSQNLENMLSLTRSEKAGQGLIV*LFAAHPPLYFEARYQSFRHA*CVHLLCQTEQICARPD**PQFRH*HHIWHR  914
                HPF GPF*LNLLE A*VR+MLQIFLQISS*SSC+GNSFQPQMCQA+LSILFV*CQK TLQQAKALNR*ISHHLSRQ N PASTPEVFPP+QNLENMLSLTRS+KAGQ LIV*LFAAHPPLYFEARYQSFRHA*CVH LCQ EQICAR D** QF H*HHI HR
Subject   3767  HPFPGPF*LNLLEPA*VRQMLQIFLQISS*SSCVGNSFQPQMCQARLSILFV*CQK*TLQQAKALNR*ISHHLSRQLNLPASTPEVFPPAQNLENMLSLTRSKKAGQELIV*LFAAHPPLYFEARYQSFRHA*CVHSLCQKEQICARLD**LQFHH*HHI*HR  4255

Range 8: 4349 to 4678 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
216.4 bits(466) 0.0 90/110(82%) 0/110(0%) Plus/Minus
Query        3  SHAYCGRLHNQQRLQSLNLF*SDMAV*IQTSDLQTSGSPSCTYMTFLRATSICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQEGIAELHQRSRNDQP  332
                +HAYCG+  NQQR QS   F*S   +  QT DL+TSGSPSCTYMT LRA SICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQ GIA LHQRSRNDQP
Subject   4349  NHAYCGKWRNQQRRQSWTPF*SYRVILNQTLDLRTSGSPSCTYMTSLRAASICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQGGIAGLHQRSRNDQP  4678

Range 9: 3768 to 4238 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
314.5 bits(680) 0.0 139/157(89%) 0/157(0%) Minus/Plus
Query      443  LCQM*CQWRN*GY*SGRAHICSV*HNK*TH*ACRKDW*RASKYKGG*AAKS*TISP*PAFSERVKDNIFSKF*EGGKTSGVLAGGFDWRDK**EI*RFKALACWSVNF*HQTKRIDSCAWHIWGWKEFPIQELHEEI*RKICNIRLT*ASSSKFNQK  913
                LC M*CQW N* Y S RAHICS *HN+*TH*ACRKDW*RASKYKGG*AAKS*TIS *PAF ERVKDNIFSKF* GGKTSGVLAG F+WRDK**EI*RFKALACWSV F HQTKRIDS AWHIWGWKEFP QELHEEI*RKICNI LT*A SSKFNQK
Subject   3768  LC*M*CQW*N*SYQSRRAHICSF*HNE*TH*ACRKDW*RASKYKGG*AAKS*TISS*PAFFERVKDNIFSKF*AGGKTSGVLAGRFNWRDK**EI*RFKALACWSVYFWHQTKRIDSRAWHIWGWKEFPTQELHEEI*RKICNICLT*AGSSKFNQK  4238

Range 10: 4466 to 4675 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
125.7 bits(268) 0.0 56/70(80%) 0/70(0%) Minus/Plus
Query        6  KAHMILKKIELFWVLNRVTY*GCSKESHIGTTWRAGGL*IRCLNLDCHVTSKKVQ*LQPLLIMQSSTICM  215
                KAHMILKKIELFWVLNRVTY*GCSK SHIGTTWRAGG *I+CL  D  VTSK+  *L PLLI   STICM
Subject   4466  KAHMILKKIELFWVLNRVTY*GCSKGSHIGTTWRAGGS*IQCLIQDYPVTSKRGP*LPPLLITPFSTICM  4675

Range 11: 4301 to 4411 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.9 bits(144) 0.0 34/37(92%) 0/37(0%) Minus/Plus
Query      270  GMSLPLKSSLGKLQA*RLVIA*SLMKFSYSLLVTSIY  380
                GMSLPLKS LGKLQA*RLVIA*SLMK SYS LVTSIY
Subject   4301  GMSLPLKSFLGKLQA*RLVIA*SLMKSSYSPLVTSIY  4411

Grapevine rupestris stem pitting associated virus isolate Tannat Rspav1, complete genome

Sequence ID: KR528585.1 Length: 8595 Number of Matches: 10

Range 1: 3748 to 4662 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
713.1 bits(1550) 0.0 298/305(98%) 0/305(0%) Minus/Plus
Query        1  ICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDF  915
                ICAKCD+NGEIEVINP G+ISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDS+PWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDE CKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMF+SRLPC+FKKGSMTAAFADYAIFHNMHDF
Subject   3748  ICAKCDINGEIEVINPRGKISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSRPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEGCKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAIFHNMHDF  4662

Range 2: 3750 to 4661 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
620.1 bits(1347) 0.0 283/304(93%) 0/304(0%) Plus/Minus
Query        2  KSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTNLRLSKLYLYDFPSSNLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHXXXXXXXXXXEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSALSKLGKYVIFDPFRESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQ  913
                KSCIL K+A*SAKAAV+EPFLK  GSL+SNIGFTNLRLSKLYLYDFPSS+LNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLH SSISRSLLIEFA+ARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQG ESLNFSSLITPV+PPSKHP*SFSA SKLGKYVIFDPF+ESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCS VMSN A++ P GLITSISP  SHLAQ
Subject   3750  KSCIL*KMA*SAKAAVMEPFLKLQGSLESNIGFTNLRLSKLYLYDFPSSSLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHPSSISRSLLIEFAKARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGLESLNFSSLITPVRPPSKHP*SFSARSKLGKYVIFDPFKESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSLVMSNNAEILPRGLITSISPFISHLAQ  4661

Range 3: 3748 to 4236 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
300.7 bits(650) 0.0 129/163(79%) 0/163(0%) Plus/Minus
Query      427  IHF*VPFD*IC*SSPR*DECYKFSFRSLHEALV*ETLSSPKCAKHNCQFSLFDVRS*HSSKPRL*IVKFLITYHASQTPQQAPLKFFRPLKTWKICYL*PVQRKQVKG*SFNFSQLIHLYTLRPVTNLFDMPNVFICYVKQSRYAPARINNLNFAIDITFGTD  915
                IH  VPFD*IC*S PR*D+CYKFSFRSLHEALV*ETLSSPKC K+NCQFSLF+V S*HSSKPR *I+KFL+ YH S T QQAPLKFFRPLKTWKICYL*PVQRKQVK *SFNFSQLIH YTLRP+TNLFDMP V I YVKQ R    RIN+ N +I ITF  +
Subject   3748  IHLQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCTKYNCQFSLFNVGS*HSSKPRP*IIKFLVAYHTS*TSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHFYTLRPITNLFDMPYVLISYVKQCRNFTTRINHFNLSIYITFSAN  4236

Range 4: 4282 to 4662 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
240.7 bits(519) 0.0 106/127(83%) 0/127(0%) Plus/Minus
Query        1  EVMHIVEDCIISKGCSH*TFFEVTWQSRFKHRIYKPPALQVVPI*LSFEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*IDVTRRE*LNFIKDHAMTSL*ACNFPKEDFKGNDIP  381
                ++MHIV++ +ISK  SH  FFEVT  S  KHRIY+PPALQVVPI*L FEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*IDVTR E*LNFIKDHAMTSL*ACNFPK++FKG++IP
Subject   4282  KIMHIVKNGVISKSGSHGAFFEVTG*S*IKHRIYEPPALQVVPI*LPFEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*IDVTRGE*LNFIKDHAMTSL*ACNFPKKNFKGDNIP  4662

Range 5: 3759 to 4220 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
261.8 bits(565) 0.0 121/154(79%) 0/154(0%) Minus/Plus
Query      443  M*CQWRN*GY*SGRAHICSV*HNK*TH*ACRKDW*RASKYKGG*AAKS*TISP*PAFSERVKDNIFSKF*EGGKTSGVLAGGFDWRDK**EI*RFKALACWSVNF*HQTKRIDSCAWHIWGWKEFPIQELHEEI*RKICNIRLT*ASSSKFNQK  904
                M* +WR+*  *S   + C V*HN * H ACRKDW* ASKYK G*AAKS*TIS *PAF ERVKDNIFSKF* GGKTSGVLAG  +W DK  EI* FKALACWSVNF H TKRIDSC W+IWGWKEFPIQELHEEI*RKICNI LT*A  SKFNQK
Subject   3759  M*YKWRD*SD*SAW*NFCIV*HN**AHKACRKDW*WASKYKSG*AAKS*TISS*PAFFERVKDNIFSKF*AGGKTSGVLAGRSNWCDKRREI**FKALACWSVNFRH*TKRIDSCTWYIWGWKEFPIQELHEEI*RKICNICLT*AGFSKFNQK  4220

Range 6: 4263 to 4658 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
244.8 bits(528) 0.0 111/132(84%) 0/132(0%) Minus/Plus
Query        5  QIKEGGLGCRYL*SLP*ESYRPKGWSLRDL**SSAIPSWLHRSMSSCYSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEVARRKVI*VQLGEPEVCKSDV*I*TAMSLQKRFNDCSLC*LCNLPQYA*  400
                QIKEGGLGC +L*S  *ESYRPKGWSLRDL**SSAIP WLHRSMSSCYSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIE ARR+VI*VQLGEPEV KSDV*  T + LQKR +DC  C*L +  QYA*
Subject   4263  QIKEGGLGCCHL*SFS*ESYRPKGWSLRDL**SSAIPPWLHRSMSSCYSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEAARREVI*VQLGEPEVRKSDV*FKTTL*LQKRLHDCRFC*LRHFSQYA*  4658

Range 7: 3758 to 4237 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
254.0 bits(548) 0.0 125/160(78%) 0/160(0%) Plus/Minus
Query      426  HPFLGPF*LNLLELA*VRRMLQIFLQIXXXXXCIGNSFQPQMCQAQLSILFV*CQKLTLQQAKALNR*ISHHLSRQSNPPASTPEVFPPSQNLENMLSLTRSEKAGQGLIV*LFAAHPPLYFEARYQSFRHA*CVHLLCQTEQICARPD**PQFRH*HHI  905
                HP  GPF*LNLL+ A*VR+MLQIFLQISS*SSCIGNSFQPQM Q QLSILFV*C+KLTLQQAKALN *IS  LS Q + PASTPEVFPP+QNLENMLSLTRS+KAGQ LIV*LFAAHP LYFEA YQSFRHA C H LCQT Q     D*  Q  H +HI
Subject   3758  HPSPGPF*LNLLKPA*VRQMLQIFLQISS*SSCIGNSFQPQMYQVQLSILFV*CRKLTLQQAKALNH*ISRRLSHQLDLPASTPEVFPPAQNLENMLSLTRSKKAGQELIV*LFAAHPLLYFEAHYQSFRHALCAH*LCQTMQKFYHAD*SLQSLHLYHI  4237

Range 8: 4331 to 4660 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
221.5 bits(477) 0.0 92/110(84%) 0/110(0%) Plus/Minus
Query        3  SHAYCGRLHNQQRLQSLNLF*SDMAV*IQTSDLQTSGSPSCTYMTFLRATSICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQEGIAELHQRSRNDQP  332
                +HAYC +  NQQ+ QS +LF*S   V  QTSDL+TSGSPSCTYMT LRA SICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQ GIAELHQRSRNDQP
Subject   4331  NHAYCEKWRNQQKRQSWSLF*SYRVVLNQTSDLRTSGSPSCTYMTSLRAASICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQGGIAELHQRSRNDQP  4660

Range 9: 3758 to 4393 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
332.4 bits(719) 0.0 173/212(82%) 0/212(0%) Minus/Plus
Query      270  NVMSMAKLRLLIRAGAYLLCLT*QMNTLGMSKRLVTGLKV*RWMSCEKLNDQPLTCFL*TGQR*HIFQVLRGRKNFRGACWGV*LA**VMRNLTIQSLGLLECQLLTSNKEN*QLCLAHLGLERVSYTRAS*RDLKENL*HSSHLGEL*QIQSKGT*KWMKNVXXXXXXXXXXXAGMSLPLKSSLGKLQA*RLVIA*SLMKFSYSLLVTSIY  905
                NV+ M +L+ LIR   +L CLT* M+T GMSKRLV GLKV*+WMSCEKLNDQ LTCFL*TGQR*HIFQVL GRKNFRGACW V*L **  RNL IQ LGLLECQL T NKEN*QL L HLGLERVSYTRAS*RDLKENL*H SHLG L*QIQSKGT +WM+ VRW*RQANQRRRAGM  PLK  LGKLQA*RLVIA*SLMKFSYS LVTSIY
Subject   3758  NVI*MERLK*LIRVVKFLHCLT*LMST*GMSKRLVMGLKV*KWMSCEKLNDQLLTCFL*TGQR*HIFQVLSGRKNFRGACWEV*LV**ATRNLMIQGLGLLECQLPTLNKEN*QLYLVHLGLERVSYTRAS*RDLKENL*HLSHLGGL*QIQSKGTWRWMRGVRW*RQANQRRRAGMLSPLKFFLGKLQA*RLVIA*SLMKFSYSPLVTSIY  4393

Range 10: 4448 to 4657 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.0 bits(262) 0.0 56/70(80%) 0/70(0%) Minus/Plus
Query        6  KAHMILKKIELFWVLNRVTY*GCSKESHIGTTWRAGGL*IRCLNLDCHVTSKKVQ*LQPLLIMQSSTICM  215
                KAHMILKKIELFWVLNRVTY*GCSK SHIGTTWRAGG *IRCL  D  VTSKK  *L  LLI    TICM
Subject   4448  KAHMILKKIELFWVLNRVTY*GCSKGSHIGTTWRAGGS*IRCLIQDYPVTSKKAP*LPLLLITPFFTICM  4657

Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome

Sequence ID: KR054734.1 Length: 8753 Number of Matches: 11

Range 1: 3766 to 4680 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
707.2 bits(1537) 0.0 291/305(95%) 0/305(0%) Minus/Plus
Query        1  ICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDF  915
                ICAKCD+NGEIEVINPGGR+SALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLS+NGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWL+G+STSDIK RELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMD+ CKV KAGKSKKEGWDVVTFEVFLRK+  LKAGHCVIFDEVQLFPPGYIDLCLL IRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYN+ESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDF
Subject   3766  ICAKCDINGEIEVINPGGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSDIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKIANLKAGHCVIFDEVQLFPPGYIDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDF  4680

Range 2: 3768 to 4679 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
545.4 bits(1184) 0.0 254/304(84%) 0/304(0%) Plus/Minus
Query        2  KSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTNLRLSKLYLYDFPSSNLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHXXXXXXXXXXEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSALSKLGKYVIFDPFRESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQ  913
                KSC+LWKIA*SA AAV+EPFLK*HGSLDSNIGFTNLRLS LYL D PSSNLN+SLCSAP IA SF ESYVL*QGSPAREMKASLR+  R RS+*PGGNS*TSSK+TQ PAFR   FLR TSKVTTSQPSFFDLPAF TL  SSIS+SLLIEFARA LGET VTN PSDLF+KLLYRKL PAP VPSTTVNS  L+SEVD P S G ESLNFSSLITPVKPPSKHP SFSALSKLGK VIFDPF E RSRADR TF SSSTF+L GPLPIFSTCL+CS VMSNRADMRPPGL+TSISPL SHLAQ
Subject   3768  KSCMLWKIA*SANAAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVL*QGSPAREMKASLRMVNRQRSI*PGGNS*TSSKMTQWPAFRFAIFLRNTSKVTTSQPSFFDLPAFATLQLSSISKSLLIEFARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLISEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTFLSSSTFMLCGPLPIFSTCLICSLVMSNRADMRPPGLMTSISPLISHLAQ  4679

Range 3: 3766 to 4254 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
202.7 bits(436) 0.0 92/163(56%) 0/163(0%) Plus/Minus
Query      427  IHF*VPFD*IC*SSPR*DECYKFSFRSLHEALV*ETLSSPKCAKHNCQFSLFDVRS*HSSKPRL*IVKFLITYHASQTPQQAPLKFFRPLKTWKICYL*PVQRKQVKG*SFNFSQLIHLYTLRPVTNLFDMPNVFICYVKQSRYAPARINNLNFAIDITFGTD  915
                IHF V F+*IC*S   *++ Y+F+FR LH+ALV +  +S K AKH+CQ S FD+RS*+S +P L IVK LITYH S  P Q PL+ F P KTWK+ YL* +  K+VK  SF+FSQLIHLY LR V NL +M N+ + YVK S +APAR+++LN  IDIT   +
Subject   3766  IHFQVSFN*IC*SPSG*NKGYEFAFRPLHKALVQKAFTSSKGAKHDCQLSRFDIRS*YS*EPWLGIVKLLITYHTS*AP*QTPLQLFSPFKTWKVSYL*SIH*KEVKSRSFHFSQLIHLYALRAVANLLNMSNMLVGYVK*S*HAPARVDDLNLPIDITLSAN  4254

Range 4: 4300 to 4680 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
170.1 bits(365) 0.0 71/127(56%) 0/127(0%) Plus/Minus
Query        1  EVMHIVEDCIISKGCSH*TFFEVTWQSRFKHRIYKPPALQVVPI*LSFEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*IDVTRRE*LNFIKDHAMTSL*ACNFPKEDFKGNDIP  381
                EVMH+VEDCIISK CSH    E+TWQS  KH I+KPP L VVP+ L+ +  QY+TL S+Q  +I L +ICALT ITSKR+ES+T+   +T +++  RE LN IK+ AM  L  CNFPK+ FKG+++P
Subject   4300  EVMHVVEDCIISKCCSHGALLEMTWQSGLKHWIHKPPTLNVVPVGLTLK*SQYITLLSSQYCAILLGVICALTGITSKRNESITSYG*QTKVNIAWREQLNLIKNDAMACLQVCNFPKKHFKGHNVP  4680

Range 5: 3786 to 4238 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
186.2 bits(400) 0.0 81/151(54%) 0/151(0%) Minus/Plus
Query      443  QWRN*GY*SGRAHICSV*HNK*TH*ACRKDW*RASKYKGG*AAKS*TISP*PAFSERVKDNIFSKF*EGGKTSGVLAGGFDWRDK**EI*RFKALACWSVNF*HQTKRIDSCAWHIWGWKEFPIQELHEEI*RKICNIRLT*ASSSKFNQK  895
                QW +*G+   RAH+ S+*HN+  +* C +DW R +++KGG*A KS TI  *P F+E +KDN+ SKF*+G K +GV A G +W DK**E+*RF+A+A  ++NF*+Q  R+DS AWH+W W +  +QEL+EE+*R+I N+  T   SSKFN K
Subject   3786  QWGD*GHQPWRAHVSSI*HNQRAY*TC*EDWQRPAEHKGG*AEKSETICS*PPFNEWIKDNLLSKF*KG*KAAGVFARGLNWCDK**EV*RFQAMALRNINF*YQISRVDSRAWHLWSW*KLSVQELYEEV*RQIRNLCFTQKGSSKFN*K  4238

Range 6: 4281 to 4679 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
131.7 bits(281) 0.0 71/133(53%) 0/133(0%) Minus/Plus
Query        2  QIKEGGLGCRYL*SLP*ESYRPKGWSLRDL**SSAIPSWLHRSMSSCYSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEVARRKVI*VQLGEPEVCKSDV*I*TAMSLQKRFNDCSLC*LCNLPQYA*L  400
                QIK+  LG   L*S+ *E+ +P+G  LR  ** S +PS L+  +S  +++* FH SCW*SLSKHI*  K     G * E*+IE+    V+ VQ  E EVC+S+V*+ TAMS Q+  +DCS+C*LCNLPQ+A*L
Subject   4281  QIKKRRLGRCDL*SVS*ENCKPEGRPLRHF**GSTVPSRLY*PLSVNHTK*CFHFSCW*SLSKHI*LPKGSRNTGS*AE*YIEIT*G*VLQVQH*ESEVCESNV*VQTAMSFQEGLHDCSIC*LCNLPQHA*L  4679

Range 7: 3779 to 4255 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
161.4 bits(346) 0.0 89/159(56%) 0/159(0%) Plus/Minus
Query      426  HPFLGPF*LNLLELA*VRRMLQIFLQIXXXXXCIGNSFQPQMCQAQLSILFV*CQKLTLQQAKALNR*ISHHLSRQSNPPASTPEVFPPSQNLENMLSLTRSEKAGQGLIV*LFAAHPPLYFEARYQSFRHA*CVHLLCQTEQICARPD**PQFRH*HH  902
                HPF   F*LNLLE   V++ L+I LQ SS*SSC  + +Q Q CQA+LS L +* QKL   +A A NR* SHHLS Q +P A+TP  F P QNLE+ LSL  S K GQ  IV LF+AHPPL    R QS +H *    LCQ E  CAR  **PQ  H*+H
Subject   3779  HPFPSLF*LNLLEPFWVKQRLRICLQTSS*SSCTESFYQLQRCQARLSTLEI*YQKLIFLRAMAWNR*TSHHLSHQLSPLANTPAAFQPFQNLESKLSLIHSLKGGQEQIVSLFSAHPPLCSAGRCQSSQHV*YARWLCQIELTCARQG**PQSPH*YH  4255

Range 8: 4349 to 4678 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.8 bits(253) 0.0 58/110(53%) 0/110(0%) Plus/Minus
Query        3  SHAYCGRLHNQQRLQSLNLF*SDMAV*IQTSDLQTSGSPSCTYMTFLRATSICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQEGIAELHQRSRNDQP  332
                SHA CGRLHNQQ LQS +  *+DMAV  QT D QTS S  CT  T+ +  SI HS Q P     F +HMCFD+DHQQE+*K H     D  + + EG  E HQ+ RN  P
Subject   4349  SHACCGRLHNQQMLQSWSPS*NDMAVWTQTLDSQTSDSQCCTCRTYPQVISIYHSAQLPVLRDPFGSHMCFDRDHQQEK*KHHFVWLTDKGQYSLEGTVEPHQK*RNGLP  4678

Range 9: 3776 to 4255 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
149.1 bits(319) 0.0 89/160(56%) 0/160(0%) Minus/Plus
Query      426  NVMSMAKLRLLIRAGAYLLCLT*QMNTLGMSKRLVTGLKV*RWMSCEKLNDQPLTCFL*TGQR*HIFQVLRGRKNFRGACWGV*LA**VMRNLTIQSLGLLECQLLTSNKEN*QLCLAHLGLERVSYTRAS*RDLKENL*HSSHLGEL*QIQSKGT*KWM  905
                +V+SM +LR    AGA  L LT*  + L M +RL T  + *RWMS EK ND  LT F *  QR*  FQVL+G K+ RG C G *L **VMR+LTI S G  E QLL SN E+*Q CLA L L +   TRA *R LK N *   H   L*QIQ K T KWM
Subject   3776  SVISMGRLRSSTLAGACQLYLT*PTSILDMLRRLATARRA*RWMS*EK*NDLLLTSFQ*MDQR*LTFQVLKGLKSCRGVC*GA*LV**VMRSLTIPSHGSQEYQLLISNLES*QSCLAPLELVKAFCTRAL*RGLKANS*PLFHPEGL*QIQLKETWKWM  4255

Range 10: 4466 to 4678 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
95.0 bits(201) 0.0 43/71(61%) 0/71(0%) Minus/Plus
Query        3  KAHMILKKIELFWVLNRVTY*GCSKESHIGTTWRAGGL*IRCLNLDCHVTSKKVQ*LQPLLIMQSSTICMT  215
                KAHM  K+I  +W L+RV Y*   + S  GTT R GGL*I+CL+ DCHV S++  *LQ LLIMQSST CMT
Subject   4466  KAHMTPKRIAQYWELSRVIY*DYLRVSPTGTTLRVGGL*IQCLSPDCHVISRRAP*LQHLLIMQSSTTCMT  4678

Range 11: 4313 to 4393 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
33.6 bits(67) 0.0 17/27(63%) 0/27(0%) Minus/Plus
Query      288  PLKSSLGKLQA*RLVIA*SLMKFSYSL  368
                PLK  LGKLQ *R  IA  LM+F+ SL
Subject   4313  PLKCFLGKLQT*RQAIASFLMRFNCSL  4393

Grapevine rupestris stem pitting associated virus isolate VF1, partial genome

Sequence ID: KT948710.1 Length: 8716 Number of Matches: 12

Range 1: 3767 to 4681 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
698.9 bits(1519) 0.0 287/305(94%) 0/305(0%) Minus/Plus
Query        1  ICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDF  915
                ICAKCD+NGEIEVINP GR+SALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLS+NGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWL+G+STS+IK RELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMD+ CKV KAGKSK+EGWDVVTFEVFLRK+  LKAGHCVIFDEVQLFPPGY+DLCLL IRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYN+ESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDF
Subject   3767  ICAKCDINGEIEVINPSGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDF  4681

Range 2: 3769 to 4680 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
523.9 bits(1137) 0.0 251/304(83%) 0/304(0%) Plus/Minus
Query        2  KSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTNLRLSKLYLYDFPSSNLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHXXXXXXXXXXEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSALSKLGKYVIFDPFRESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQ  913
                KSCIL K+A*SAKAAV+EPFLK*HGSLDSNIGFTNLRLS LYL D PSSNLN+SLCSAP IA SF ESYVL QGSPA EMKASLR+  R RS *PGGNS*TSSKITQ PAFR   FLR TSKVTTSQPS FDLPAF TL  SSISRSLLIE ARA LGET VTN PSDLF+KLLYRKL PAP VPSTTVNS  L+ EVD P S G ESLNFSSLITPVKPPSKHP SFSALSKLGK VIFDPF E RSRADR TF SSSTF+L GPLPIFSTCL+CS VMSNRADMRP GLITSISPL SHLAQ
Subject   3769  KSCIL*KMA*SAKAAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVLWQGSPASEMKASLRMVNRQRST*PGGNS*TSSKITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRSLLIELARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTFLSSSTFMLCGPLPIFSTCLICSLVMSNRADMRPLGLITSISPLMSHLAQ  4680

Range 3: 3767 to 4255 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
195.3 bits(420) 0.0 87/163(53%) 0/163(0%) Plus/Minus
Query      427  IHF*VPFD*IC*SSPR*DECYKFSFRSLHEALV*ETLSSPKCAKHNCQFSLFDVRS*HSSKPRL*IVKFLITYHASQTPQQAPLKFFRPLKTWKICYL*PVQRKQVKG*SFNFSQLIHLYTLRPVTNLFDMPNVFICYVKQSRYAPARINNLNFAIDITFGTD  915
                IHF + F+*I *S P *++ Y+F+FR LH+AL+ +TL+S K  KH+CQF  FD+ S*+  KP L I+KF +TYHAS    Q  L+ F P K WK+ YL  + R++VK  S +FSQ IHLY LR VTNL +MP +FI YVKQS +A ARI+NLN  I++T  T+
Subject   3767  IHFQISFN*IS*SPPG*NKGYEFTFRPLHKALIQKTLASSKSPKHDCQFPRFDI*S*YP*KPWLGIIKFFVTYHAS*AS*QTSLQLFCPFKAWKVSYLRSIHREEVKSRSLHFSQFIHLYALRAVTNLLNMPYMFISYVKQS*HASARIDNLNLPINVTLSTN  4255

Range 4: 4301 to 4681 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
140.4 bits(300) 0.0 60/127(47%) 0/127(0%) Plus/Minus
Query        1  EVMHIVEDCIISKGCSH*TFFEVTWQSRFKHRIYKPPALQVVPI*LSFEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*IDVTRRE*LNFIKDHAMTSL*ACNFPKEDFKGNDIP  381
                E+MHIV++ IIS+ CSH    E+TWQS  KH I+KPPAL VVP+ L+ +  QY+TL      ++ L +ICAL  +TS+ +ESVT+   +T +++  R+ LN IKDH M  L*  N  ++ FKG+D+P
Subject   4301  EIMHIVKNGIISESCSHGALLEMTWQSGLKHWIHKPPALNVVPVGLALK*SQYITLLGP*YCAVLLGVICALAGVTSE*NESVTSYG*QTKVNIAWRKQLNLIKDHTMACL*ILNLSEKHFKGHDVP  4681

Range 5: 3769 to 4239 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
157.3 bits(337) 0.0 78/157(50%) 0/157(0%) Minus/Plus
Query      443  LCQM*CQWRN*GY*SGRAHICSV*HNK*TH*ACRKDW*RASKYKGG*AAKS*TISP*PAFSERVKDNIFSKF*EGGKTSGVLAGGFDWRDK**EI*RFKALACWSVNF*HQTKRIDSCAWHIWGWKEFPIQELHEEI*RKICNIRLT*ASSSKFNQK  913
                LC +*  W +*GY S R H+ SV*HN *T+ AC +DW*R +++KGG*  KS  I  *P   E ++DN+ SK *+G K +G+ A   +WRDK* +I* F+A+A   +NF +Q   IDS AW  W W+EF + EL+EE+*R I N+  T   SS FN K
Subject   3769  LC*V*H*WGD*GYQS*RTHVSSV*HN**TYKAC*EDW*RPAEHKGG*TEKSEAICS*PPLDEWIEDNLLSKL*KGRKAAGMFARRLNWRDK*RKI**FQAMAFRDINFKYQISGIDSRAWDFWSWQEFSV*ELYEEV*R*IRNLCFTQEGSS*FN*K  4239

Range 6: 4467 to 4676 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.6 bits(150) 0.0 36/70(51%) 0/70(0%) Minus/Plus
Query        6  KAHMILKKIELFWVLNRVTY*GCSKESHIGTTWRAGGL*IRCLNLDCHVTSKKVQ*LQPLLIMQSSTICM  215
                KAHM  K+   +   ++V Y*   + S  GTT RAGGL*I+CL+ DCHV S++  *LQ  LIM   TICM
Subject   4467  KAHMTPKRTAQY*GPSKVIY*DYLRASPTGTTLRAGGL*IQCLSPDCHVISRRAP*LQLSLIMPFFTICM  4676

Range 7: 4282 to 4488 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.0 bits(118) 0.0 34/69(49%) 0/69(0%) Minus/Plus
Query      194  QIKEGGLGCRYL*SLP*ESYRPKGWSLRDL**SSAIPSWLHRSMSSCYSQ*RFHLSCW*SLSKHI*FSK  400
                Q+KE GLG R L*S+  +    KG  L DL** SA+ S L   +S  +++*RFH + W* L KHI*  K
Subject   4282  QVKERGLGRRDL*SVSQKD*ESKGRPLCDL**GSAVSSRLC*PLSVNHTK*RFHFTRW*PLPKHI*LPK  4488

Range 8: 3768 to 4256 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
139.0 bits(297) 0.0 84/163(52%) 0/163(0%) Plus/Minus
Query      426  HPFLGPF*LNLLELA*VRRMLQIFLQIXXXXXCIGNSFQPQMCQAQLSILFV*CQKLTLQQAKALNR*ISHHLSRQSNPPASTPEVFPPSQNLENMLSLTRSEKAGQGLIV*LFAAHPPLYFEARYQSFRHA*CVHLLCQTEQICARPD**PQFRH*HHIWHR  914
                HPF   F*LN LE + V++ L+I+LQ SS*SS   NS Q Q  QA+LSI  +*  KL   +A A N *I  HLSRQ +  A+ P  F P Q+LE+ LS   S + GQ  I  LF+ HPPL    RYQS +HA  VH LCQTE  C R D**PQ  H* H  H+
Subject   3768  HPFPDLF*LN*LEPSWVKQRLRIYLQTSS*SSYTENSCQLQKSQARLSIPEI*YLKLISLKAMAWNH*IFRHLSRQLSLLANIPAAFLPFQSLESKLSSIHSSRGGQEQIASLFSVHPPLCSAGRYQSSQHALYVH*LCQTELTCVR*D**PQSPH*CHT*HK  4256

Range 9: 4518 to 4679 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.9 bits(131) 0.0 29/54(54%) 0/54(0%) Plus/Minus
Query        3  SHAYCGRLHNQQRLQSLNLF*SDMAV*IQTSDLQTSGSPSCTYMTFLRATSICH  164
                +HAYC + HNQ++LQS +  *+DMAV  QT D QTSGS  CT  T  +  SI H
Subject   4518  NHAYCEKWHNQRKLQSWSPS*NDMAVWTQTLDSQTSGSQCCTCRTCPQVISIYH  4679

Range 10: 4350 to 4487 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.0 bits(94) 0.0 21/46(46%) 0/46(0%) Plus/Minus
Query      195  FENHMCFDKDHQQER*KRHCE*QEDIDRCNQEGIAELHQRSRNDQP  332
                F +HMCF + HQ+ +*KRH     D  + + E  AE HQRS N  P
Subject   4350  FGSHMCFGRGHQRVK*KRHFVWLTDKGQHSLEETAEPHQRSHNGLP  4487

Range 11: 3771 to 4385 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
147.2 bits(315) 0.0 105/205(51%) 0/205(0%) Minus/Plus
Query      297  VPNVMSMAKLRLLIRAGAYLLCLT*QMNTLGMSKRLVTGLKV*RWMSCEKLNDQPLTCFL*TGQR*HIFQVLRGRKNFRGACWGV*LA**VMRNLTIQSLGLLECQLLTSNKEN*QLCLAHLGLERVSYTRAS*RDLKENL*HSSHLGEL*QIQSKGT*KWMKNVXXXXXXXXXXXAGMSLPLKSSLGKLQA*RLVIA*SLMKFS  911
                V +V  M +LRL I A A  LCLT* MN  GM +RLVT  + *RWM+ EK +D  LT   *  +R*  FQ L+G+K+ R  C   *LA**V +NL I S G    QL  SN  N*Q CL  L L RV   RA *R LK N *   H G L* IQ K   KWM   +W RQA+QR R G S PLK    +L+ *R  I *SLM+FS
Subject   3771  VLSVTLMGRLRLSILADACQLCLT*LMNI*GMLRRLVTARRA*RWMN*EK*SDLLLTSSR*MDRR*LTFQALKGQKSCRDVC*EA*LA**VTKNLMIPSHGFQGYQLQISNLGN*QSCLGLLELARVFCIRAL*RGLKVNS*PLFHPGGL*LIQLKEIWKWMMAAKWQRQASQRERVGTS*PLKCFSERLRI*RQAIV*SLMRFS  4385

Range 12: 4516 to 4677 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
60.2 bits(125) 0.0 29/54(54%) 0/54(0%) Minus/Plus
Query        5  E*HIEVARRKVI*VQLGEPEVCKSDV*I*TAMSLQKRFNDCSLC*LCNLPQYA*  166
                +*+IE+   +V+ VQ  EPEVC+S+V*+ TAMS Q+  +DCS  *LC+  QYA*
Subject   4516  K*YIEIT*GQVLQVQH*EPEVCESNV*VQTAMSFQEGLHDCSFR*LCHFSQYA*  4677

Nucleotide Sequence (543 letters)

Query ID:ds2016-58_48
Query definition:No definition line
Query length:589
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 13 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
55
110
165
220
275
330
385
440
495
543

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 8

Range 1: 5006 to 5542 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
422.2 bits(915) 0.0 171/179(96%) 0/179(0%) Minus/Minus
Query        6  CGWHSVEPLKGKCQVKTSHMALRALILQLRLEALKISDVS*RP*ERSLNHYLYVLDICFQIFHMHCSIARFFHTCVHQRTVGSFHNHISLHGVPSTPSFQPTWPWLIPSYLMGYGF*TIPHLSIQTQVPQLRNPHLGQGKA*PLAKDHHTASPLSPLHSAQC*H*NH*RSWAHLEANPL  542
                CG HSVEPLKGKCQVKTSHMALRALILQLRLEALKI DVS*+P*ERSLNHYLYVLDICFQIFHMHCSIARFFHTCVHQRTVGSFHNHISLHGVPSTPSFQPTWPW IPSYLMGYGF*TIPHL+IQTQ PQLRNPHLGQGKA*PLAKDHHTASPLSPLHSAQC*H*NH*RSWAH EA+PL
Subject   5006  CGLHSVEPLKGKCQVKTSHMALRALILQLRLEALKI*DVS*QP*ERSLNHYLYVLDICFQIFHMHCSIARFFHTCVHQRTVGSFHNHISLHGVPSTPSFQPTWPWSIPSYLMGYGF*TIPHLNIQTQAPQLRNPHLGQGKA*PLAKDHHTASPLSPLHSAQC*H*NH*RSWAHREASPL  5542

Range 2: 5002 to 5541 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
402.9 bits(873) 0.0 170/180(94%) 0/180(0%) Minus/Minus
Query        2  VAGIQWNL*KESVK*KLPIWLCAP*FCSFDLRL*KFQTFPNGHEKGH*IITFMSWIYAFKSFTCIAQLLASSTPVFIKELLGRFITTSHFTVFLQRHLSNPPGPG*FQVT*WDMGFKPFLI*AFRLKFLNFAILILAKEKHDL*PRITTQLLLSHPFIPPNANIETIKEAGLTWKQIPYY  541
                VA IQWNL*KESVK*KLPIWLCAP*FCSFDLRL*KF+TFPN HEKGH*IITFMSWIYAFKSFTCIAQLLASSTPVFIKELLGRFITTSHFTVFLQRHLSNPPGPG FQVT*WDMGFKPFLI* FRLK LNFAILILAKEKHDL*PRITTQLLLSHPFIPPNANIETIKE GLT KQ+PY+
Subject   5002  VACIQWNL*KESVK*KLPIWLCAP*FCSFDLRL*KFKTFPNSHEKGH*IITFMSWIYAFKSFTCIAQLLASSTPVFIKELLGRFITTSHFTVFLQRHLSNPPGPGRFQVT*WDMGFKPFLI*TFRLKLLNFAILILAKEKHDL*PRITTQLLLSHPFIPPNANIETIKEVGLTGKQVPYH  5541

Range 3: 5001 to 5543 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
392.4 bits(850) 0.0 173/181(96%) 0/181(0%) Plus/Plus
Query        1  CNKGFASR*AQLL*WFQC*HWAE*RGERGEAVW*SLAKGHAFPWPR*GLRS*GT*V*MLK*GMV*NPYPIK*LGINQGQVGWKDGVEGTP*SEMWL*NDPTVL**TQVWKKRAIEQCM*KI*KHISKT*R**FSDLSHGR*ETSEIFKASSRSCKIKARKAIWEVFT*HFPFKGSTECQPQ  543
                C+KG ASR*AQLL*WFQC*HWAE*RGERGEAVW*SLAKGHAFPWPR*GLRS*G *V*M K*GMV*NPYPIK*LGI+QGQVGWKDGVEGTP*SEMWL*NDPTVL**TQVWKKRAIEQCM*KI*KHISKT*R**FSDLSHG *ETS IFKASSRSCKIKARKAIWEVFT*HFPFKGSTEC+PQ
Subject   5001  CDKGLASR*AQLL*WFQC*HWAE*RGERGEAVW*SLAKGHAFPWPR*GLRS*GA*V*MFK*GMV*NPYPIK*LGIDQGQVGWKDGVEGTP*SEMWL*NDPTVL**TQVWKKRAIEQCM*KI*KHISKT*R**FSDLSHGC*ETS*IFKASSRSCKIKARKAIWEVFT*HFPFKGSTECKPQ  5543

Range 4: 5003 to 5542 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
385.0 bits(834) 0.0 171/180(95%) 0/180(0%) Plus/Plus
Query        3  **GICFQVSPASLMVSMLALGGMKG*ERRSCVVILG*RSCFSLAKMRIAKLRNLSLNAQMRNGLKPISH*VTWNQPGPGGLERWR*RNTVK*DVVMKRPNSSLMNTGVEEASN*AMHVKDLKAYIQDIKVMIQ*PFSWPLGNV*NFQSLKSKLQN*GAQSHMGSFYLTLSFQRFH*MPAT  542
                **G CF VSP SLMVSMLALGGMKG*ERRSCVVILG*RSCFSLAKMRIAKLR+LSLN QMRNGLKPISH*VTWN+PGPGGLERWR*RNTVK*DVVMKRPNSSLMNTGVEEASN*AMHVKDLKAYIQDIKVMIQ*PFSW LGNV NFQSLKSKLQN*GAQSHMGSFYLTLSFQRFH*M AT
Subject   5003  **GTCFPVSPTSLMVSMLALGGMKG*ERRSCVVILG*RSCFSLAKMRIAKLRSLSLNVQMRNGLKPISH*VTWNRPGPGGLERWR*RNTVK*DVVMKRPNSSLMNTGVEEASN*AMHVKDLKAYIQDIKVMIQ*PFSWLLGNVLNFQSLKSKLQN*GAQSHMGSFYLTLSFQRFH*MQAT  5542

Range 5: 5188 to 5541 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
291.1 bits(629) 0.0 118/118(100%) 0/118(0%) Plus/Plus
Query      188  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH  541
                WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH
Subject   5188  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH  5541

Range 6: 5002 to 5136 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.4 bits(239) 0.0 44/45(98%) 0/45(0%) Plus/Plus
Query        2  VIRDLLPGEPSFFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQ  136
                VIRDLLPGEP+FFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQ
Subject   5002  VIRDLLPGEPNFFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQ  5136

Range 7: 5187 to 5543 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
288.4 bits(623) 0.0 118/119(99%) 0/119(0%) Minus/Minus
Query      187  LWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFENFRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSKLLNGIWVLNH  543
                LWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFEN RRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSKLLNGIWVLNH
Subject   5187  LWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFENLRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSKLLNGIWVLNH  5543

Range 8: 5001 to 5120 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
95.9 bits(203) 0.0 40/40(100%) 0/40(0%) Minus/Minus
Query        1  MTFSQGSPHSFSSLTPSFRPMLTLKPLKKLGSPGSKSLIT  120
                MTFSQGSPHSFSSLTPSFRPMLTLKPLKKLGSPGSKSLIT
Subject   5001  MTFSQGSPHSFSSLTPSFRPMLTLKPLKKLGSPGSKSLIT  5120

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 8

Range 1: 5188 to 5541 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
289.3 bits(625) 0.0 117/118(99%) 0/118(0%) Plus/Plus
Query      188  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH  541
                WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSE+LSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH
Subject   5188  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEKLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH  5541

Range 2: 5002 to 5136 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.4 bits(239) 0.0 44/45(98%) 0/45(0%) Plus/Plus
Query        2  VIRDLLPGEPSFFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQ  136
                VIRDLLPGEP+FFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQ
Subject   5002  VIRDLLPGEPNFFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQ  5136

Range 3: 5006 to 5542 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
362.6 bits(785) 0.0 152/179(85%) 0/179(0%) Minus/Minus
Query        6  CGWHSVEPLKGKCQVKTSHMALRALILQLRLEALKISDVS*RP*ERSLNHYLYVLDICFQIFHMHCSIARFFHTCVHQRTVGSFHNHISLHGVPSTPSFQPTWPWLIPSYLMGYGF*TIPHLSIQTQVPQLRNPHLGQGKA*PLAKDHHTASPLSPLHSAQC*H*NH*RSWAHLEANPL  542
                CG HSV P KGKCQVK SHMALRA ILQL+LEA +I DVS*+P* RSLNHYLYVLDICFQIFHMHCSI+RFFHT VHQRTVGSFHNHISLHGVPS PSFQPTWP LIP YLMGYGF*TIPH SIQTQVPQ RNPHLG  KA*PLAKDHH A PL+ LHSAQC* *+H*RSWAH EANPL
Subject   5006  CGLHSVGPSKGKCQVKISHMALRASILQLQLEASRI*DVS*QP*GRSLNHYLYVLDICFQIFHMHCSISRFFHTYVHQRTVGSFHNHISLHGVPSMPSFQPTWPLLIPDYLMGYGF*TIPHSSIQTQVPQPRNPHLGLRKA*PLAKDHHKAFPLALLHSAQC*R*SH*RSWAHREANPL  5542

Range 4: 5002 to 5541 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
360.3 bits(780) 0.0 152/180(84%) 0/180(0%) Minus/Minus
Query        2  VAGIQWNL*KESVK*KLPIWLCAP*FCSFDLRL*KFQTFPNGHEKGH*IITFMSWIYAFKSFTCIAQLLASSTPVFIKELLGRFITTSHFTVFLQRHLSNPPGPG*FQVT*WDMGFKPFLI*AFRLKFLNFAILILAKEKHDL*PRITTQLLLSHPFIPPNANIETIKEAGLTWKQIPYY  541
                VA IQW+L KESVK*K PIWLCAP FCSF+LRL +F+TFP+ HE+GH*IITFMSWIYAFKSFTCIAQ LASSTP+FIKELLGRFITTSHFTVFLQ HLSNPPGP *FQ+T*WDMGFKPFLI AFRLKFLN AILILA EKHDL*PRITT+L LSH FIPPNAN+E IKE GLT KQIPY+
Subject   5002  VACIQWDLRKESVK*KFPIWLCAPQFCSFNLRLREFKTFPDSHEEGH*IITFMSWIYAFKSFTCIAQFLASSTPMFIKELLGRFITTSHFTVFLQCHLSNPPGPC*FQIT*WDMGFKPFLIRAFRLKFLNLAILILA*EKHDL*PRITTKLFLSHSFIPPNANVEAIKEVGLTGKQIPYH  5541

Range 5: 5187 to 5543 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
281.9 bits(609) 0.0 116/119(97%) 0/119(0%) Minus/Minus
Query      187  LWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFENFRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSKLLNGIWVLNH  543
                LWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFEN RRFLTAMRKVTESLPLCLGYMLSNLSHALLN SLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDS+LLNGIWVLNH
Subject   5187  LWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFENLRRFLTAMRKVTESLPLCLGYMLSNLSHALLNFSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSRLLNGIWVLNH  5543

Range 6: 5001 to 5120 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
89.5 bits(189) 0.0 38/40(95%) 0/40(0%) Minus/Minus
Query        1  MTFSQGSPHSFSSLTPSFRPMLTLKPLKKLGSPGSKSLIT  120
                MTFSQGSP SFSS TPSFRPMLTLKPLKKLGSPGSKSLIT
Subject   5001  MTFSQGSPQSFSSRTPSFRPMLTLKPLKKLGSPGSKSLIT  5120

Range 7: 5001 to 5543 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
338.8 bits(733) 0.0 153/181(85%) 0/181(0%) Plus/Plus
Query        1  CNKGFASR*AQLL*WFQC*HWAE*RGERGEAVW*SLAKGHAFPWPR*GLRS*GT*V*MLK*GMV*NPYPIK*LGINQGQVGWKDGVEGTP*SEMWL*NDPTVL**TQVWKKRAIEQCM*KI*KHISKT*R**FSDLSHGR*ETSEIFKASSRSCKIKARKAIWEVFT*HFPFKGSTECQPQ  543
                C+KGFASR*AQLL*W Q *HWAE*R  RG+A+W*SLAKGHAF  PR*GLR *GT*V*ML+*GMV*NPYPIK* GIN+GQVGWKDG+EGTP*SEMWL*NDPTVL**T VWKKR IEQCM*KI*KHISKT*R**FSDL HG  ETS I +ASS SCKI+ARKAIWE+FT*HFPF+G TEC+PQ
Subject   5001  CDKGFASR*AQLL*WLQR*HWAE*RSARGKALW*SLAKGHAFLRPR*GLRG*GT*V*MLE*GMV*NPYPIK*SGINKGQVGWKDGIEGTP*SEMWL*NDPTVL**T*VWKKREIEQCM*KI*KHISKT*R**FSDLPHGCQETS*ILEASS*SCKIEARKAIWEIFT*HFPFEGPTECKPQ  5543

Range 8: 5003 to 5542 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
334.2 bits(723) 0.0 153/180(85%) 0/180(0%) Plus/Plus
Query        3  **GICFQVSPASLMVSMLALGGMKG*ERRSCVVILG*RSCFSLAKMRIAKLRNLSLNAQMRNGLKPISH*VTWNQPGPGGLERWR*RNTVK*DVVMKRPNSSLMNTGVEEASN*AMHVKDLKAYIQDIKVMIQ*PFSWPLGNV*NFQSLKSKLQN*GAQSHMGSFYLTLSFQRFH*MPAT  542
                **GICF VSP SLM S LALGGMK  ER+S VVILG*RSCFS AKMRIA+LRNLSLNA+MRNGLKPISH*V WNQ GPGGLERW *RNTVK*DVVMKRPNSSLMN GVEEA N*AMHVKDLKAYIQDIKVMIQ*P SW  GNV N +SLK KLQN*GAQSHMG+FYLTLSF+R H*M AT
Subject   5003  **GICFPVSPTSLMASTLALGGMKECERKSFVVILG*RSCFS*AKMRIARLRNLSLNARMRNGLKPISH*VIWNQQGPGGLERWH*RNTVK*DVVMKRPNSSLMNIGVEEARN*AMHVKDLKAYIQDIKVMIQ*PSSWLSGNVLNSRSLKLKLQN*GAQSHMGNFYLTLSFRRSH*MQAT  5542

Grapevine rupestris stem pitting associated virus isolate CS BR, complete genome

Sequence ID: KX958435.1 Length: 8743 Number of Matches: 8

Range 1: 5189 to 5542 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
280.6 bits(606) 0.0 114/118(97%) 0/118(0%) Plus/Plus
Query      188  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH  541
                WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHR G  EQLSNACERFESIYPRHKGNDS+TFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH
Subject   5189  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH  5542

Range 2: 5003 to 5137 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.9 bits(227) 0.0 40/45(89%) 0/45(0%) Plus/Plus
Query        2  VIRDLLPGEPSFFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQ  136
                VIRDLLPGEP+FFNGF+++IG+NEGVREEKLCGDPWLKVMLFLGQ
Subject   5003  VIRDLLPGEPNFFNGFSINIGKNEGVREEKLCGDPWLKVMLFLGQ  5137

Range 3: 5188 to 5544 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
221.0 bits(476) 0.0 95/119(80%) 0/119(0%) Minus/Minus
Query      187  LWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFENFRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSKLLNGIWVLNH  543
                LWLAF+GTF+RKVSS+NFP GFARL+FAAST GFENFRRF TA++KV ESLPLCLG MLS  S ALLNCS +P LCSSKNC VVS PH TSRCSF AIFPTHLALVDSKLL G+ VLNH
Subject   5188  LWLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFRRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPIPPLCSSKNC*VVSYPHRTSRCSFKAIFPTHLALVDSKLLKGMCVLNH  5544

Range 4: 5002 to 5121 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.9 bits(168) 0.0 33/40(82%) 0/40(0%) Minus/Minus
Query        1  MTFSQGSPHSFSSLTPSFRPMLTLKPLKKLGSPGSKSLIT  120
                +TFS GSPHSFSS TPSF PML LKPLKK GSPGS+SLIT
Subject   5002  ITFSHGSPHSFSSRTPSFLPMLMLKPLKKFGSPGSRSLIT  5121

Range 5: 5003 to 5542 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
206.8 bits(445) 0.0 101/180(56%) 0/180(0%) Minus/Minus
Query        2  VAGIQWNL*KESVK*KLPIWLCAP*FCSFDLRL*KFQTFPNGHEKGH*IITFMSWIYAFKSFTCIAQLLASSTPVFIKELLGRFITTSHFTVFLQRHLSNPPGPG*FQVT*WDMGFKPFLI*AFRLKFLNFAILILAKEKHDL*PRITTQLLLSHPFIPPNANIETIKEAGLTWKQIPYY  541
                VA I W+   ESVK + PI LC P*  SF L L*K Q F +GH KG+ +I  +S I AFK+FT IA LLA S PVFI+ELL  FI TS+ TV LQ H  NP  PG* Q+    + F+PF I*  RLK  NF +LILA EKH+ *PRITTQL LS+ FI  + + ETI++  LTWK IPY+
Subject   5003  VASI*WDFR*ESVKQEFPIRLCTP*LRSFHLWL*KLQAFSDGH*KGNGVIALVSRINAFKTFTGIA*LLAHSPPVFIEELLSCFIPTSYLTVLLQGHFPNPSSPG*LQIAQGYVCFEPFFI*TLRLKLFNFTVLILA*EKHNF*PRITTQLFLSYTFILTDVDAETIEKVWLTWK*IPYH  5542

Range 6: 5007 to 5543 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
191.2 bits(411) 0.0 97/179(54%) 0/179(0%) Minus/Minus
Query        6  CGWHSVEPLKGKCQVKTSHMALRALILQLRLEALKISDVS*RP*ERSLNHYLYVLDICFQIFHMHCSIARFFHTCVHQRTVGSFHNHISLHGVPSTPSFQPTWPWLIPSYLMGYGF*TIPHLSIQTQVPQLRNPHLGQGKA*PLAKDHHTASPLSPLHSAQC*H*NH*RSWAHLEANPL  542
                CG H +    GKCQ   SH AL AL  QL   ALK S V  RP +R  +H   V D CFQ  H HC IAR F  CVH+R    FH HI  HG PS P  QP  PWL P+      F*TI HL+ QTQ  QL +PH G  KA* LA DHHTA PL  LHS +C* *NH*+S AHLE +PL
Subject   5007  CG*HLMGLSIGKCQAGISHKALHALASQLPPVALKTSGVFGRPLKR*WSHCPCV*DKCFQNVHRHCLIARPFPPCVHRRIAELFHTHIVPHGAPSRPFSQPI*PWLTPNCSRVCVF*TILHLNTQTQALQLHSPHPGLRKA*LLATDHHTAFPLVHLHSYRC*C*NH*KSLAHLEVDPL  5543

Range 7: 5004 to 5543 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
189.8 bits(408) 0.0 99/180(55%) 0/180(0%) Plus/Plus
Query        3  **GICFQVSPASLMVSMLALGGMKG*ERRSCVVILG*RSCFSLAKMRIAKLRNLSLNAQMRNGLKPISH*VTWNQPGPGGLERWR*RNTVK*DVVMKRPNSSLMNTGVEEASN*AMHVKDLKAYIQDIKVMIQ*PFSWPLGNV*NFQSLKSKLQN*GAQSHMGSFYLTLSFQRFH*MPAT  542
                **GI FQVS    MVS      MK  ER+SCVVI G*+ CFS A+MR  KL++LSL+ QM+NG K    *  W+QPG  GL +W *R+TV+ DV MK+ ++S MNTG E ASN*AM V  LKA+I D + M   PF WP  N *+FQS + KL++*G QS MG+  LTLS+++ H*M AT
Subject   5004  **GIYFQVSQTFSMVSASTSVRMKVYERKSCVVIRG*KLCFS*ARMRTVKLKSLSLSVQMKNGSKHTYP*AIWSQPGLDGLGKWP*RSTVRYDVGMKQLSNSSMNTGGEWASN*AMPVNVLKAFILDTRAMTPLPF*WPSENA*SFQSHRWKLRS*GVQSLMGNSCLTLSYRKSH*MLAT  5543

Range 8: 5002 to 5544 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
187.1 bits(402) 0.0 94/181(52%) 0/181(0%) Plus/Plus
Query        1  CNKGFASR*AQLL*WFQC*HWAE*RGERGEAVW*SLAKGHAFPWPR*GLRS*GT*V*MLK*GMV*NPYPIK*LGINQGQVGWKDGVEGTP*SEMWL*NDPTVL**TQVWKKRAIEQCM*KI*KHISKT*R**FSDLSHGR*ETSEIFKASSRSCKIKARKAIWEVFT*HFPFKGSTECQPQ  543
                C+KG  SR*A+L  WFQ  H  E*R  RG+AVW*S+AK +AF  P *GL S*  *V*+ K* MV N + ++  G+NQG +GW++G+EG P*  MW+*N+  +L *TQ    RAI+QC+*  *KH+S T   *   L +GR +T E+FKA+  SC+ KA KA+WE+  *HFP +   +C PQ
Subject   5002  CDKGSTSR*AKLFQWFQHQHR*E*RCTRGKAVW*SVAKSYAFLRPG*GL*S*RA*V*VFK*RMVQNTHTLEQFGVNQG*MGWENGLEGAP*GTMWV*NNSAILR*TQGGNGRAIKQCL*TF*KHLS*TQGQ*LHYLFNGRPKTPEVFKATGGSCEAKACKALWEIPA*HFPIESPIKC*PQ  5544

Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome

Sequence ID: KR054734.1 Length: 8753 Number of Matches: 8

Range 1: 5188 to 5541 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
280.6 bits(606) 0.0 114/118(97%) 0/118(0%) Plus/Plus
Query      188  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH  541
                WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHR G  EQLSNACERFESIYPRHKGNDS+TFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH
Subject   5188  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH  5541

Range 2: 5002 to 5136 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
104.2 bits(221) 0.0 39/45(87%) 0/45(0%) Plus/Plus
Query        2  VIRDLLPGEPSFFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQ  136
                VIRDLLPGEP F+NGF+++IG+NEGVREEKLCGDPWLKVMLFLGQ
Subject   5002  VIRDLLPGEPIFYNGFSINIGKNEGVREEKLCGDPWLKVMLFLGQ  5136

Range 3: 5187 to 5543 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
216.4 bits(466) 0.0 92/119(77%) 0/119(0%) Minus/Minus
Query      187  LWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFENFRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSKLLNGIWVLNH  543
                LWLAF+GTF++ VSS+NFP GFARL+FAAST GFENF+RF TA++KV ESLPLCLG MLSNLS ALLNCS +P LCSSKNC VVS P  TSRCSF AIFPTHLALVDS+LL G+ VLNH
Subject   5187  LWLAFNGTFDKNVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSNLSQALLNCSPIPPLCSSKNC*VVSYPQRTSRCSFKAIFPTHLALVDSRLLKGMCVLNH  5543

Range 4: 5001 to 5120 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.7 bits(161) 0.0 32/40(80%) 0/40(0%) Minus/Minus
Query        1  MTFSQGSPHSFSSLTPSFRPMLTLKPLKKLGSPGSKSLIT  120
                +T S GSPHSFSSLTPSF PML LKPL K+GSPGS+SLIT
Subject   5001  ITLSHGSPHSFSSLTPSFLPMLMLKPL*KIGSPGSRSLIT  5120

Range 5: 5002 to 5541 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
197.2 bits(424) 0.0 97/180(54%) 0/180(0%) Minus/Minus
Query        2  VAGIQWNL*KESVK*KLPIWLCAP*FCSFDLRL*KFQTFPNGHEKGH*IITFMSWIYAFKSFTCIAQLLASSTPVFIKELLGRFITTSHFTVFLQRHLSNPPGPG*FQVT*WDMGFKPFLI*AFRLKFLNFAILILAKEKHDL*PRITTQLLLSHPFIPPNANIETIKEAGLTWKQIPYY  541
                VA IQWN *++ VK K  I LCAP* CS  L L*K  T P+ H K   IIT MS + AFKSFT IA LLA +  VFI+ELL   I  +H TV  Q H  +P  PG* Q+    + F+PF I*  RLK  NF I ILA EKH+  P +TTQ  L H FI  N N ETI E  LTWK IPY+
Subject   5002  VASIQWNF*QKCVKQKFSIRLCAP*LCSLHLWL*KL*TLPDSH*KSDGIITLMSRVNAFKSFTSIA*LLAHTPSVFIEELLSCLIPATHLTVLFQGHFPDPSSPG*LQIAQGYVCFEPFFI*TLRLKLFNFTIFILA*EKHNFKPWVTTQFFLPHTFIFANVNAETIVENWLTWK*IPYH  5541

Range 6: 5003 to 5542 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
180.7 bits(388) 0.0 98/180(54%) 0/180(0%) Plus/Plus
Query        3  **GICFQVSPASLMVSMLALGGMKG*ERRSCVVILG*RSCFSLAKMRIAKLRNLSLNAQMRNGLKPISH*VTWNQPGPGGLERWR*RNTVK*DVVMKRPNSSLMNTGVEEASN*AMHVKDLKAYIQDIKVMIQ*PFSWPLGNV*NFQSLKSKLQN*GAQSHMGSFYLTLSFQRFH*MPAT  542
                **GI FQVS  S MVS L L  MK * R++CVV  G + CFS A+M+I KL++LSL+ QM+NG K    *  W+QPG  G  +W *++TV+    M++ +SS MNT    ASN*AM VKDLKA+  DI+VMI   F W  G+V*+FQS K +LQ+*GAQS M +F LT   Q+FH*M AT
Subject   5003  **GIYFQVSQFSTMVSALTLAKMKV*GRKNCVVTHGLKLCFS*ARMKIVKLKSLSLSVQMKNGSKHTYP*AIWSQPGLDGSGKWP*KSTVRCVAGMRQLSSSSMNTEGVWASN*AMLVKDLKAFTLDIRVMIPSLF*WLSGSV*SFQSHKWRLQS*GAQSLMENFCLTHFCQKFH*MLAT  5542

Range 7: 5006 to 5542 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
178.9 bits(384) 0.0 91/179(51%) 0/179(0%) Minus/Minus
Query        6  CGWHSVEPLKGKCQVKTSHMALRALILQLRLEALKISDVS*RP*ERSLNHYLYVLDICFQIFHMHCSIARFFHTCVHQRTVGSFHNHISLHGVPSTPSFQPTWPWLIPSYLMGYGF*TIPHLSIQTQVPQLRNPHLGQGKA*PLAKDHHTASPLSPLHSAQC*H*NH*RSWAHLEANPL  542
                CG HS+E L   CQ +  H ALRAL LQ  L ALK  + S +P ++  NHY YV   CFQIFH HC IAR +  CVH+RT    H   + HG  S P  +P  PWL P       F*TI HL+ QTQ  QL N H G  KA*  A  HHT  P S LH  QC* *NH R  AHLE +PL
Subject   5006  CG*HSMELLTKMCQAEIFHKALRALALQPPLVALKTLNASGQPLKK*WNHYPYV*GKCFQIFHKHCLIARPYPLCVHRRTAELSHTRNAPHGALSRPFSRPI*PWLTPDCSRVCVF*TILHLNTQTQALQLHNLHPGLRKA*L*AMGHHTVFPPSHLHFCQC*C*NHCRKLAHLEVDPL  5542

Range 8: 5001 to 5543 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
166.0 bits(356) 0.0 90/181(50%) 0/181(0%) Plus/Plus
Query        1  CNKGFASR*AQLL*WFQC*HWAE*RGERGEAVW*SLAKGHAFPWPR*GLRS*GT*V*MLK*GMV*NPYPIK*LGINQGQVGWKDGVEGTP*SEMWL*NDPTVL**TQVWKKRAIEQCM*KI*KHISKT*R**FSDLSHGR*ETSEIFKASSRSCKIKARKAIWEVFT*HFPFKGSTECQPQ  543
                C+KG  SR*A  L WFQ *HW +*R E G+ VW* +A  +AF  P * L S*  *V*+ K* MV N + ++  G+NQG +G ++G+E  P*  + +*++  VL *TQ    RAI+QC+*KI*KH+  T* **F    +G  E  ++FKA+S  CK KARKA+W++  *H   K S EC PQ
Subject   5001  CDKGSTSR*ANFLQWFQH*HWQK*RCEGGKTVW*PMA*SYAFLRPG*RL*S*RA*V*VFK*RMVQNTHTLEQSGVNQG*MGRENGLERAP*GALRV*DNSAVLR*TQRGYGRAIKQCL*KI*KHLP*T*G**FHHFFNGCPEAFKVFKATSGGCKAKARKALWKISA*HIFVKSSIEC*PQ  5543

Grapevine rupestris stem pitting associated virus isolate Tannat Rspav1, complete genome

Sequence ID: KR528585.1 Length: 8595 Number of Matches: 8

Range 1: 5170 to 5523 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
276.5 bits(597) 0.0 112/118(95%) 0/118(0%) Plus/Plus
Query      188  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH  541
                WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYE TQQFFDEHR G  EQLSNACERFESIYPRHKGNDS+TFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLD+FLSKVPLNASH
Subject   5170  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKVPLNASH  5523

Range 2: 4984 to 5118 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
108.7 bits(231) 0.0 42/45(93%) 0/45(0%) Plus/Plus
Query        2  VIRDLLPGEPSFFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQ  136
                VIRDLLPGEP+FF+GFNVSIG+NEGVREEKLCGDPWLKVMLFLGQ
Subject   4984  VIRDLLPGEPNFFSGFNVSIGKNEGVREEKLCGDPWLKVMLFLGQ  5118

Range 3: 5169 to 5519 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
207.3 bits(446) 0.0 88/117(75%) 0/117(0%) Minus/Minus
Query      187  LAFSGTFERKVSSKNFPYGFARLNFAAST*GFENFRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSKLLNGIWVLNH  537
                LAFSGT +RK S++NFPYG AR + AAST GFEN RRF TA+RKV ES PLCLG MLSNLSHALL+CS +P LCSSKNC V S*P  TSRCSF AI PTHLALVDS+LL G+WVLNH
Subject   5169  LAFSGTLDRKESNRNFPYGLARRSLAASTWGFENLRRFRTAIRKVIESFPLCLG*MLSNLSHALLSCSPVPPLCSSKNC*VTS*PQRTSRCSFKAILPTHLALVDSRLLRGMWVLNH  5519

Range 4: 4983 to 5102 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.1 bits(175) 0.0 34/40(85%) 0/40(0%) Minus/Minus
Query        1  MTFSQGSPHSFSSLTPSFRPMLTLKPLKKLGSPGSKSLIT  120
                MTF+ GSPH+FSSLTPSF PMLTLKPLKKLGSPGSKS +T
Subject   4983  MTFNHGSPHNFSSLTPSFFPMLTLKPLKKLGSPGSKSRMT  5102

Range 5: 4987 to 5523 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
232.0 bits(500) 0.0 100/179(56%) 0/179(0%) Minus/Minus
Query        5  VAGIQWNL*KESVK*KLPIWLCAP*FCSFDLRL*KFQTFPNGHEKGH*IITFMSWIYAFKSFTCIAQLLASSTPVFIKELLGRFITTSHFTVFLQRHLSNPPGPG*FQVT*WDMGFKPFLI*AFRLKFLNFAILILAKEKHDL*PRITTQLLLSHPFIPPNANIETIKEAGLTWKQIPY  541
                +  I W+  ++ V *+LPIWL  P*F SF+L L KF+T  + H++G+*II+FM W+ AFK  TCIAQLL SST + IKELL  FITT+H  +  Q H ++PPGPG* Q+T  D+GFKPF I*AF L   NF ILIL +EKHD *P +TTQLLL + FI  NAN++  +E  LTW+Q+ Y
Subject   4987  MTSI*WDFRQKGV**ELPIWLGPP*FGSFNLGLRKFETLSDSHKEGY*IISFMPWVNAFKPLTCIAQLLTSSTSMLIKELLSHFITTTHLPMLFQGHFTHPPGPG*LQITQGDVGFKPFFI*AF*LHLFNFTILILTQEKHDF*PWVTTQLLLPNTFILSNANVKATEEVRLTWEQVSY  5523

Range 6: 4994 to 5482 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
195.3 bits(420) 0.0 92/163(56%) 0/163(0%) Minus/Minus
Query       12  VKTSHMALRALILQLRLEALKISDVS*RP*ERSLNHYLYVLDICFQIFHMHCSIARFFHTCVHQRTVGSFHNHISLHGVPSTPSFQPTWPWLIPSYLMGYGF*TIPHLSIQTQVPQLRNPHLGQGKA*PLAKDHHTASPLSPLHSAQC*H*NH*RSWAHLEAN  500
                + TSHMA  A++ QL+  A KI D   +P* R LNH+LY L  CFQ  HMHCS+A  FH   HQR V S HNH +     S P + PTWPWL P Y  G GF*TI HLSI T   QL NPHL  GKA* L   HHT SP   LHS QC* *+H*RS AHL A+
Subject   4994  IGTSHMAWPAVVWQLQPGASKI*DAFGQP*GRLLNHFLYALGKCFQTSHMHCSVAHQFHLYAHQRIVESLHNHNAPPDALSRPFYPPTWPWLTPDYSGGCGF*TILHLSILTPSLQLHNPHLDPGKA*LLTMGHHTTSPP*HLHSFQC*R*SH*RS*AHLGAS  5482

Range 7: 4997 to 5515 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
187.6 bits(403) 0.0 97/173(56%) 0/173(0%) Plus/Plus
Query       15  CFQVSPASLMVSMLALGGMKG*ERRSCVVILG*RSCFSLAKMRIAKLRNLSLNAQMRNGLKPISH*VTWNQPGPGGLERWR*RNTVK*DVVMKRPNSSLMNTGVEEASN*AMHVKDLKAYIQDIKVMIQ*PFSWPLGNV*NFQSLKSKLQN*GAQSHMGSFYLTLSFQRFH*M  533
                C QVS  S +   LAL  MK   RRSCVV  G*+SCFS  KMRI KL+  S NAQM+NGLKP S *V W+QPGPGG  +W *++  +  VVMK  N+SLM+  VE  SN*AMHV+ LKA+ Q IK MIQ*P  W   +V NF+S + KL N G  SHMGS Y T    + H*M
Subject   4997  CSQVSLTSSVALTLALERMKVLGRRSCVVTHG*KSCFSWVKMRIVKLKRWSQNAQMKNGLKPTSP*VIWSQPGPGGWVKWP*KSIGRCVVVMK*LNNSLMSIEVELVSN*AMHVRGLKAFTQGIKEMIQ*PSLWLSESVSNFRSPRLKLPNYGGPSHMGSSY*TPFCLKSH*M  5515

Range 8: 4983 to 5477 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
165.1 bits(354) 0.0 88/165(53%) 0/165(0%) Plus/Plus
Query        1  CNKGFASR*AQLL*WFQC*HWAE*RGERGEAVW*SLAKGHAFPWPR*GLRS*GT*V*MLK*GMV*NPYPIK*LGINQGQVGWKDGVEGTP*SEMWL*NDPTVL**TQVWKKRAIEQCM*KI*KHISKT*R**FSDLSHGR*ETSEIFKASSRSCKIKARKAIWEV  495
                C+   A R*A LL W   *HW E*R   GE VW* + K HAFP  R*GL S*   V MLK* MV*NP+P +* G+NQGQVG  +G+E      +WL*+D T+L**   W   A EQCM*++*KH+ K *R *F++L +G  + S+IF+A   SC+  A +AIWEV
Subject   4983  CHTRLAPR*A*LLQWL*R*HWKE*RC*GGEVVW*PMVKSHAFPGSR*GL*S*RDGVRMLK*RMV*NPHPPE*SGVNQGQVGG*NGLERASGGALWL*SDSTIL**A*RWNW*ATEQCM*EV*KHLPKA*RK*FNNLPYGCPKASQIFEAPG*SCQTTAGQAIWEV  5477

Nucleotide Sequence (449 letters)

Query ID:ds2016-58_48
Query definition:No definition line
Query length:589
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 13 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
45
90
135
180
225
270
315
360
405
449

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus complete genome, genomic RNA, isolate GRSPaV MG

Sequence ID: FR691076.1 Length: 8749 Number of Matches: 7

Range 1: 3274 to 3693 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
332.4 bits(719) 0.0 135/140(96%) 0/140(0%) Minus/Plus
Query       22  SVPGHGNCFWHSDGFLLSTDGFALKAGIRPFVESERLISSDLSAPTISKQLEENAYAENEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRPEVDVLNYLCRPSTKH  441
                SVPG GNCFWHS GFLLSTDGFALKAGIR FVESERLISSDLSAPTISKQLEENAYAENEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGR EVDVLNYLCRPST H
Subject   3274  SVPGDGNCFWHSVGFLLSTDGFALKAGIRSFVESERLISSDLSAPTISKQLEENAYAENEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNH  3693

Range 2: 3270 to 3695 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
317.2 bits(686) 0.0 131/142(92%) 0/142(0%) Minus/Plus
Query       20  YLRTWSWQLLLAFRWFPAQY*WFRSEGRHSTFCGE*APY*FRSFSSNHF*TIGRECLC*E*DDCIILYPAPRKADSSNTRI*S*LEIWGK*VAPMWNSLPEVQSLPTMCPTEWLHDHGHCLSAWEA*S*CVKLSM*A*HQTH  445
                +LRTW WQLLLAF WF AQY*WF SEGRHS FCGE*APY*FRSFSSNHF*TIGRECLC E*DDCIILYPAPRKADSSNTRI*S*LE+WGK*VAPMWNSLPEVQSLPTM PTEWLHDHGHCLSAWEA*S*CVKLSM A*HQ H
Subject   3270  FLRTW*WQLLLAFSWFSAQY*WFCSEGRHSIFCGE*APY*FRSFSSNHF*TIGRECLCRE*DDCIILYPAPRKADSSNTRI*S*LEVWGK*VAPMWNSLPEVQSLPTMRPTEWLHDHGHCLSAWEA*S*CVKLSMQA*HQPH  3695

Range 3: 3271 to 3708 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
292.5 bits(632) 0.0 130/146(89%) 0/146(0%) Plus/Minus
Query        7  QNVLGVFGARPT*II*HINFRPPKR*GNGRDHATIQWGTWLEVIGLQAKNST*GPLTFPKFPTNFIFWCYYYQPYVVPDTK*CNHXXXXXXXXFQLFRNGWS*KI*TNKALTLHKRSNACLQSETISTEQETI*MPKAIAMTRYGD  444
                Q +  V GARP *II*HINF PPKR*GNGRDHATIQWG WLEVIGLQAKNST*GPLTFPK PTNFIFWCYYYQPYVVPDTK*CNHLIL ISILFQLFRNGWS*KI*TNKALTLHKRSNA LQS+TISTEQ+T *MPKAIA+TRYG+
Subject   3271  QLLKNVVGARPA*II*HINFTPPKR*GNGRDHATIQWGAWLEVIGLQAKNST*GPLTFPKLPTNFIFWCYYYQPYVVPDTK*CNHLILGISILFQLFRNGWS*KI*TNKALTLHKRSNAGLQSKTISTEQKTN*MPKAIAITRYGE  3708

Range 4: 3272 to 3694 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
282.9 bits(611) 0.0 129/141(91%) 0/141(0%) Plus/Minus
Query       21  CVWC*AYIDNLTHQLQASQALRQWP*SCNHSVGHMVGSDWTSGKEFHIGATHFPQISNXXXXXXXXXXXXRGAGYKIMQSSHSQHKHSLPIV*KWLELKDLN**GAHSPQKVECLPSERNHQY*AGNHLNAKSNCHDQVRR  443
                C WC*A IDNLTHQL ASQALRQWP*SCNHSVG MVGSDWTSGKEFHIGATHFPQ SN*LHILVLLLSALRGAGYKIMQSSHS+HKHSLPIV*KWLELKDLN**GAHSPQK+EC PSE+NHQY*A N LNAKSNCH QVRR
Subject   3272  CGWC*ACIDNLTHQLHASQALRQWP*SCNHSVGRMVGSDWTSGKEFHIGATHFPQTSN*LHILVLLLSALRGAGYKIMQSSHSRHKHSLPIV*KWLELKDLN**GAHSPQKIECRPSEQNHQY*AENQLNAKSNCHHQVRR  3694

Range 5: 3266 to 3694 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
275.5 bits(595) 0.0 133/143(93%) 0/143(0%) Minus/Plus
Query       21  TLSPYLVMAIAFGIQMVSCSVLMVSL*RQAFDLLWRVSALLVQIFQLQPFLNNWKXXXXXXXXXLHYFVSGTT*G****HQNMKLVGNLGKVSGPYVEFFA*SPITSNHVPH*MVA*SRPLPQRLGGLKLMC*IIYVGLAPNT  449
                TLSPYLVMAIAFGIQ+V CSVLMV L*R AFDLLWRVSALLVQIFQLQPFLNNWKRMLM RMR*LHYFVSGTT*G****HQNMKLVG+LGKVSGPYVEFFA*SPITSNH PH*MVA*SRPLPQRLGG+KLMC*IIY GLAP T
Subject   3266  TLSPYLVMAIAFGIQLVFCSVLMVLL*RPAFDLLWRVSALLVQIFQLQPFLNNWKRMLMPRMR*LHYFVSGTT*G****HQNMKLVGSLGKVSGPYVEFFA*SPITSNHAPH*MVA*SRPLPQRLGGVKLMC*IIYAGLAPTT  3694

Range 6: 3468 to 3689 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
175.6 bits(377) 0.0 73/74(99%) 0/74(0%) Plus/Minus
Query       26  LVLGLHR*FNTSTSGLPSAEAMAVIMQPFSGAHGWK*LDFRQRIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQ  247
                LVLGLHR*FNTSTS LPSAEAMAVIMQPFSGAHGWK*LDFRQRIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQ
Subject   3468  LVLGLHR*FNTSTSRLPSAEAMAVIMQPFSGAHGWK*LDFRQRIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQ  3689

Range 7: 3273 to 3422 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
111.0 bits(236) 0.0 47/50(94%) 0/50(0%) Plus/Minus
Query      293  CLEMVGAERSELIRRSLSTKGRMPAFRAKPSVLSRKPSECQKQLP*PGTE  442
                CLEMVGAERSELIRRSLSTK RMPAFRAKPSVLSRKP+ECQKQLP PGTE
Subject   3273  CLEMVGAERSELIRRSLSTKDRMPAFRAKPSVLSRKPTECQKQLPSPGTE  3422

Grapevine rupestris stem pitting associated virus isolate SK704 C, complete genome

Sequence ID: KX274276.1 Length: 8726 Number of Matches: 7

Range 1: 3275 to 3694 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
328.7 bits(711) 0.0 132/140(94%) 0/140(0%) Minus/Plus
Query       22  SVPGHGNCFWHSDGFLLSTDGFALKAGIRPFVESERLISSDLSAPTISKQLEENAYAENEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRPEVDVLNYLCRPSTKH  441
                SVPG GNCFWHS GFLLSTDG ALKAGIR FVESERL+SSDLSAPTISKQLEENAYAENEMIALFC+RHHVRLIVVTPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGR EVDVLNYLCRPST H
Subject   3275  SVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESERLVSSDLSAPTISKQLEENAYAENEMIALFCVRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNH  3694

Range 2: 3271 to 3696 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
269.1 bits(581) 0.0 116/142(82%) 0/142(0%) Minus/Plus
Query       20  YLRTWSWQLLLAFRWFPAQY*WFRSEGRHSTFCGE*APY*FRSFSSNHF*TIGRECLC*E*DDCIILYPAPRKADSSNTRI*S*LEIWGK*VAPMWNSLPEVQSLPTMCPTEWLHDHGHCLSAWEA*S*CVKLSM*A*HQTH  445
                +LRTW WQLLLAF WF AQY*W  SEGRHS F G+* P *FRSFSSN+F*TIG ECLC*+*+DCIIL PAPRKADS NTRI*S*LEIWGK*VA MWNSLPEVQSLP + P EWLHDH HCLSAWEA*S*CVKLS+*A*H  H
Subject   3271  FLRTW*WQLLLAFSWFLAQY*WSCSEGRHSIFRGK*TPG*FRSFSSNYF*TIGGECLC*K*NDCIILCPAPRKADSGNTRI*S*LEIWGK*VASMWNSLPEVQSLPALRPIEWLHDHSHCLSAWEA*S*CVKLSV*A*H*PH  3696

Range 3: 3272 to 3709 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
265.5 bits(573) 0.0 119/146(82%) 0/146(0%) Plus/Minus
Query        7  QNVLGVFGARPT*II*HINFRPPKR*GNGRDHATIQWGTWLEVIGLQAKNST*GPLTFPKFPTNFIFWCYYYQPYVVPDTK*CNHXXXXXXXXFQLFRNGWS*KI*TNKALTLHKRSNACLQSETISTEQETI*MPKAIAMTRYGD  444
                Q +  V  ARPT II*HINF PPKR*GNG DHATIQWG  LEVIGLQAKNST* PLTFPKFPTNFIFWCY+YQPYVVPDTK*CNH I SI IL QLFRN WS*KI*TN+A T H+RSNA LQS+TISTEQET *MPKAIA+TRYG+
Subject   3272  QLLKNVVSARPTQII*HINFTPPKR*GNGCDHATIQWGARLEVIGLQAKNST*RPLTFPKFPTNFIFWCYHYQPYVVPDTK*CNHFIFSIGILLQLFRNSWS*KI*TNQAFTFHERSNAGLQSKTISTEQETN*MPKAIAITRYGE  3709

Range 4: 3469 to 3690 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
168.3 bits(361) 0.0 70/74(95%) 0/74(0%) Plus/Minus
Query       26  LVLGLHR*FNTSTSGLPSAEAMAVIMQPFSGAHGWK*LDFRQRIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQ  247
                LVLGLHR*FNTSTS LPSAEAMAVIMQPF+GA GWK*LDFRQRIPHRGHSLSPNFQLTSYSGVTTISLTWCR Q
Subject   3469  LVLGLHR*FNTSTSRLPSAEAMAVIMQPFNGAQGWK*LDFRQRIPHRGHSLSPNFQLTSYSGVTTISLTWCRTQ  3690

Range 5: 3274 to 3423 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
104.2 bits(221) 0.0 43/50(86%) 0/50(0%) Plus/Minus
Query      293  CLEMVGAERSELIRRSLSTKGRMPAFRAKPSVLSRKPSECQKQLP*PGTE  442
                CLE+VGAERSEL RRSLSTK RMPAFRA+PSVLS+KP+ECQKQLP PGTE
Subject   3274  CLEIVGAERSELTRRSLSTKDRMPAFRARPSVLSKKPTECQKQLPSPGTE  3423

Range 6: 3267 to 3695 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
243.5 bits(525) 0.0 121/143(85%) 0/143(0%) Minus/Plus
Query       21  TLSPYLVMAIAFGIQMVSCSVLMVSL*RQAFDLLWRVSALLVQIFQLQPFLNNWKXXXXXXXXXLHYFVSGTT*G****HQNMKLVGNLGKVSGPYVEFFA*SPITSNHVPH*MVA*SRPLPQRLGGLKLMC*IIYVGLAPNT  449
                TLSPYLVMAIAFGIQ+VSCSVLMV L*R AFDL W+V+A LVQIFQLQ FLNNW+RM ML+M+*LHYFVSGTT*G** *HQNMKLVGNLGKVSG YVEFFA*SPITS+  PH*MVA*S+PLPQRLGG+KLMC*II VGLA  T
Subject   3267  TLSPYLVMAIAFGIQLVSCSVLMVLL*RPAFDLSWKVNAWLVQIFQLQLFLNNWRRMPMLKMK*LHYFVSGTT*G**W*HQNMKLVGNLGKVSGLYVEFFA*SPITSSLAPH*MVA*SQPLPQRLGGVKLMC*IICVGLALTT  3695

Range 7: 3273 to 3695 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
237.5 bits(512) 0.0 113/141(80%) 0/141(0%) Plus/Minus
Query       21  CVWC*AYIDNLTHQLQASQALRQWP*SCNHSVGHMVGSDWTSGKEFHIGATHFPQISNXXXXXXXXXXXXRGAGYKIMQSSHSQHKHSLPIV*KWLELKDLN**GAHSPQKVECLPSERNHQY*AGNHLNAKSNCHDQVRR  443
                C  C*AY DNLTHQL ASQALRQW *SCNHS+G   GSDWTSGKEFHI ATHFPQISN*LHILVL LSALRGAG+KIMQS H QH+HS PIV*K LELKDLN* G H P+K+EC PSE++HQY*A N LNAKSNCH QVRR
Subject   3273  CG*C*AYTDNLTHQLHASQALRQWL*SCNHSMGRKAGSDWTSGKEFHIEATHFPQISN*LHILVLPLSALRGAGHKIMQSFHFQHRHSPPIV*K*LELKDLN*PGVHFPRKIECRPSEQDHQY*ARNQLNAKSNCHHQVRR  3695

Rupestris stem pitting associated virus strain SG1, complete genome

Sequence ID: AY881626.1 Length: 8742 Number of Matches: 7

Range 1: 3274 to 3693 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
329.1 bits(712) 0.0 131/140(94%) 0/140(0%) Minus/Plus
Query       22  SVPGHGNCFWHSDGFLLSTDGFALKAGIRPFVESERLISSDLSAPTISKQLEENAYAENEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRPEVDVLNYLCRPSTKH  441
                SVPG GNCFWHS GFLLSTDGFALKAGIR FVESERL+SSDLSAPTISKQLEENAYAENEMIALFCIRHHVRLIV+TPEYEVSWKFGESEWPLCGILCL+SNHFQPCAP+NGCMITAIASALGR EVDVLNYLCRPST H
Subject   3274  SVPGDGNCFWHSVGFLLSTDGFALKAGIRSFVESERLVSSDLSAPTISKQLEENAYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLRSNHFQPCAPINGCMITAIASALGRREVDVLNYLCRPSTNH  3693

Range 2: 3270 to 3695 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
275.1 bits(594) 0.0 114/142(80%) 0/142(0%) Minus/Plus
Query       20  YLRTWSWQLLLAFRWFPAQY*WFRSEGRHSTFCGE*APY*FRSFSSNHF*TIGRECLC*E*DDCIILYPAPRKADSSNTRI*S*LEIWGK*VAPMWNSLPEVQSLPTMCPTEWLHDHGHCLSAWEA*S*CVKLSM*A*HQTH  445
                +L  W WQLLLAF WF  QY*WF  EGRHS FCGE*AP *FRSFSSNHF*TIGRECLC +*+DC ILYPAPRKADS+NTRI*S*LEIWGK VAPMWNS+PEVQSLPTM P +WLHD+GHC S WEA*S*CV+LS+*A*H +H
Subject   3270  FLCAW*WQLLLAFSWFLTQY*WFCFEGRHSIFCGE*APG*FRSFSSNHF*TIGRECLCRK*NDCTILYPAPRKADSNNTRI*S*LEIWGKRVAPMWNSVPEVQSLPTMRPNKWLHDYGHCFSTWEA*S*CVELSV*A*H*SH  3695

Range 3: 3277 to 3708 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
261.8 bits(565) 0.0 117/144(81%) 0/144(0%) Plus/Minus
Query        7  QNVLGVFGARPT*II*HINFRPPKR*GNGRDHATIQWGTWLEVIGLQAKNST*GPLTFPKFPTNFIFWCYYYQPYVVPDTK*CNHXXXXXXXXFQLFRNGWS*KI*TNKALTLHKRSNACLQSETISTEQETI*MPKAIAMTRY  438
                Q +  V  ARPT II HINF PPK * NGR+HATI WG WLEVIG QA+NST*GPL FPKFPTNFIFWCYYYQPYVVPDTK*CNH I  ISILFQLFRNGWS*KI*TN+ALTLHKRSNA LQS+TISTE ET *MPKAIA+TR+
Subject   3277  QLLKNVISARPTQIIQHINFTPPKC*SNGRNHATIYWGAWLEVIGPQAQNST*GPLAFPKFPTNFIFWCYYYQPYVVPDTK*CNHFIFGISILFQLFRNGWS*KI*TNQALTLHKRSNAGLQSKTISTE*ETN*MPKAIAITRH  3708

Range 4: 3468 to 3689 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
165.1 bits(354) 0.0 69/74(93%) 0/74(0%) Plus/Minus
Query       26  LVLGLHR*FNTSTSGLPSAEAMAVIMQPFSGAHGWK*LDFRQRIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQ  247
                LVLGLHR*FNTSTS LPSAEAMAVIMQPF GAHGWK*LD R RIPHRGHSLSPNFQLTSYSGV TISLTWCRIQ
Subject   3468  LVLGLHR*FNTSTSRLPSAEAMAVIMQPFIGAHGWK*LDLRHRIPHRGHSLSPNFQLTSYSGVITISLTWCRIQ  3689

Range 5: 3273 to 3422 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.0 bits(225) 0.0 44/50(88%) 0/50(0%) Plus/Minus
Query      293  CLEMVGAERSELIRRSLSTKGRMPAFRAKPSVLSRKPSECQKQLP*PGTE  442
                CLEMVGAERSEL RRSLSTK RMPAF+AKPSVLS+KP+ECQKQLP PGTE
Subject   3273  CLEMVGAERSELTRRSLSTKDRMPAFKAKPSVLSKKPTECQKQLPSPGTE  3422

Range 6: 3272 to 3694 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
246.7 bits(532) 0.0 114/141(81%) 0/141(0%) Plus/Minus
Query       21  CVWC*AYIDNLTHQLQASQALRQWP*SCNHSVGHMVGSDWTSGKEFHIGATHFPQISNXXXXXXXXXXXXRGAGYKIMQSSHSQHKHSLPIV*KWLELKDLN**GAHSPQKVECLPSERNHQY*AGNHLNAKSNCHDQVRR  443
                C  C*AY DN THQL ASQ L+QWP*SCNH +G MVGSDWTSG EFHIGAT FPQISN*LHILVLLLSALRGAGYKI+QS H +HKHSLPIV*KWLELKDLN* GAHSPQK+EC PS++NHQY*  N LNAKSNCH Q +R
Subject   3272  CD*C*AYTDNSTHQLHASQVLKQWP*SCNHLLGRMVGSDWTSGTEFHIGATRFPQISN*LHILVLLLSALRGAGYKIVQSFHFRHKHSLPIV*KWLELKDLN*PGAHSPQKIECRPSKQNHQY*VRNQLNAKSNCHHQAQR  3694

Range 7: 3266 to 3685 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
235.7 bits(508) 0.0 120/140(86%) 0/140(0%) Minus/Plus
Query       30  TLSPYLVMAIAFGIQMVSCSVLMVSL*RQAFDLLWRVSALLVQIFQLQPFLNNWKXXXXXXXXXLHYFVSGTT*G****HQNMKLVGNLGKVSGPYVEFFA*SPITSNHVPH*MVA*SRPLPQRLGGLKLMC*IIYVGLA  449
                TLS  LVMAIAFGIQ+VS SVLMV L*R AFDLLWRVSA LVQIFQLQPFLNNWKRMLM +M+*LHYFVSGTT*G****HQNMKLVGNLGK SGPYVEF A* PITSNH P *MVA* RPL Q LGG+KLMC*II VGLA
Subject   3266  TLSLCLVMAIAFGIQLVSYSVLMVLL*RPAFDLLWRVSAWLVQIFQLQPFLNNWKRMLMPKMK*LHYFVSGTT*G****HQNMKLVGNLGKASGPYVEFCA*GPITSNHAPQ*MVA*LRPLLQHLGGVKLMC*IICVGLA  3685

Grapevine rupestris stem pitting associated virus isolate TEMP BR replicase, 24.4 kDa protein, 12.8 kDa protein, 8.4 kDa protein, and 28 kDa protein genes, complete cds

Sequence ID: KX925556.1 Length: 8700 Number of Matches: 7

Range 1: 3263 to 3682 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
328.2 bits(710) 0.0 131/140(94%) 0/140(0%) Minus/Plus
Query       22  SVPGHGNCFWHSDGFLLSTDGFALKAGIRPFVESERLISSDLSAPTISKQLEENAYAENEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRPEVDVLNYLCRPSTKH  441
                SVPG GNCFWHS GFLLSTDG ALKAGIR FVESERL+SSDLSAPT+SKQLEENAYAENEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGR EVD+LNYLCRPST H
Subject   3263  SVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESERLVSSDLSAPTVSKQLEENAYAENEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDILNYLCRPSTNH  3682

Range 2: 3259 to 3684 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
270.5 bits(584) 0.0 118/142(83%) 0/142(0%) Minus/Plus
Query       20  YLRTWSWQLLLAFRWFPAQY*WFRSEGRHSTFCGE*APY*FRSFSSNHF*TIGRECLC*E*DDCIILYPAPRKADSSNTRI*S*LEIWGK*VAPMWNSLPEVQSLPTMCPTEWLHDHGHCLSAWEA*S*CVKLSM*A*HQTH  445
                +L TW  QLLLAF WF  QY* F SEG HS FCGE*AP *FRSFSSN F*TIGR+CLC*E*DDCI+LYPAP K DSSNTRI*S*LEIWGK*VAPMWNSLPEVQSLPTM PTEWLHDHGHCLSAWEA*S*  KLS+* *H +H
Subject   3259  FLCTW*RQLLLAFSWFLTQY*RFSSEGWHSIFCGE*APS*FRSFSSNRF*TIGRKCLC*E*DDCIVLYPAPCKTDSSNTRI*S*LEIWGK*VAPMWNSLPEVQSLPTMRPTEWLHDHGHCLSAWEA*S*YFKLSV*T*H*SH  3684

Range 3: 3266 to 3697 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
265.0 bits(572) 0.0 121/144(84%) 0/144(0%) Plus/Minus
Query        7  QNVLGVFGARPT*II*HINFRPPKR*GNGRDHATIQWGTWLEVIGLQAKNST*GPLTFPKFPTNFIFWCYYYQPYVVPDTK*CNHXXXXXXXXFQLFRNGWS*KI*TNKALTLHKRSNACLQSETISTEQETI*MPKAIAMTRY  438
                Q +  V  AR T II*+INF PPKR*GNGRDHATIQWG WLEVIGLQAKNST*GPLTFPKFPTNFIFWCYYYQ Y+VPDT+ CNHLILSISI FQLFRNGWS*KI*TN ALTLHKRSNA LQS T+STE ET *MPKAIA+TRY
Subject   3266  QLLKNVISARSTQII*NINFTPPKR*GNGRDHATIQWGAWLEVIGLQAKNST*GPLTFPKFPTNFIFWCYYYQSYMVPDTEQCNHLILSISIFFQLFRNGWS*KI*TN*ALTLHKRSNASLQS*TVSTE*ETN*MPKAIAVTRY  3697

Range 4: 3457 to 3678 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
170.1 bits(365) 0.0 71/74(96%) 0/74(0%) Plus/Minus
Query       26  LVLGLHR*FNTSTSGLPSAEAMAVIMQPFSGAHGWK*LDFRQRIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQ  247
                LVLGLHR*F  STS LPSAEAMAVIMQPFSGAHGWK*LDFRQRIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQ
Subject   3457  LVLGLHR*FKISTSRLPSAEAMAVIMQPFSGAHGWK*LDFRQRIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQ  3678

Range 5: 3262 to 3411 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
104.6 bits(222) 0.0 44/50(88%) 0/50(0%) Plus/Minus
Query      293  CLEMVGAERSELIRRSLSTKGRMPAFRAKPSVLSRKPSECQKQLP*PGTE  442
                CLE VGAERSEL RRSLSTK RMPAFRAKPSVLS+KP+ECQKQLP PGTE
Subject   3262  CLETVGAERSELTRRSLSTKDRMPAFRAKPSVLSKKPTECQKQLPSPGTE  3411

Range 6: 3261 to 3683 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
244.8 bits(528) 0.0 116/141(82%) 0/141(0%) Plus/Minus
Query       21  CVWC*AYIDNLTHQLQASQALRQWP*SCNHSVGHMVGSDWTSGKEFHIGATHFPQISNXXXXXXXXXXXXRGAGYKIMQSSHSQHKHSLPIV*KWLELKDLN**GAHSPQKVECLPSERNHQY*AGNHLNAKSNCHDQVRR  443
                C  C* Y DNL +QL ASQALRQWP*SCNHSVG MVGSDWTSGKEFHIGATHFPQISN*LHILVLLLS L GAGY+ MQSSHSQHKH LPIV*K LELKDLN* GAHSPQK+EC PSE N QY*  N LNAKSNC  QV+R
Subject   3261  CD*C*VYTDNLKYQLHASQALRQWP*SCNHSVGRMVGSDWTSGKEFHIGATHFPQISN*LHILVLLLSVLHGAGYRTMQSSHSQHKHFLPIV*KRLELKDLN*LGAHSPQKIECQPSELNRQY*VRNQLNAKSNCRHQVQR  3683

Range 7: 3258 to 3674 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
226.5 bits(488) 0.0 120/139(86%) 0/139(0%) Minus/Plus
Query       30  LSPYLVMAIAFGIQMVSCSVLMVSL*RQAFDLLWRVSALLVQIFQLQPFLNNWKXXXXXXXXXLHYFVSGTT*G****HQNMKLVGNLGKVSGPYVEFFA*SPITSNHVPH*MVA*SRPLPQRLGGLKLMC*IIYVGLA  446
                LS YLV AIAFGIQ+VS SVL V L*R AFDLLWRVSA LVQIFQLQPFLNNWK+MLMLRMR*LH  VSGT * ****HQNMKLVGNLGKVSGPYVEFFA*SPITSNH PH*MVA*SRPLPQRLGG+KL+ *II V LA
Subject   3258  LSLYLVTAIAFGIQLVSYSVLTV*L*RLAFDLLWRVSA*LVQIFQLQPFLNNWKKMLMLRMR*LHCSVSGTM*D****HQNMKLVGNLGKVSGPYVEFFA*SPITSNHAPH*MVA*SRPLPQRLGGVKLIF*IICVDLA  3674

Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome

Sequence ID: JX559646.1 Length: 8726 Number of Matches: 7

Range 1: 3274 to 3693 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
327.8 bits(709) 0.0 130/140(93%) 0/140(0%) Minus/Plus
Query       22  SVPGHGNCFWHSDGFLLSTDGFALKAGIRPFVESERLISSDLSAPTISKQLEENAYAENEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRPEVDVLNYLCRPSTKH  441
                SVPG GNCFWHS GFLLSTDGFALKAGIR FVESERL+SSDLSAPTISKQLEENAYAENEMIALFCIRHHVRLIV+TPEYEVSWKFGESEWPLCGILCL+SNHFQPCAP+NGCMITAIASALGR EVDVLNYLC+PST H
Subject   3274  SVPGDGNCFWHSVGFLLSTDGFALKAGIRSFVESERLVSSDLSAPTISKQLEENAYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLRSNHFQPCAPINGCMITAIASALGRREVDVLNYLCKPSTNH  3693

Range 2: 3270 to 3695 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
274.6 bits(593) 0.0 114/142(80%) 0/142(0%) Minus/Plus
Query       20  YLRTWSWQLLLAFRWFPAQY*WFRSEGRHSTFCGE*APY*FRSFSSNHF*TIGRECLC*E*DDCIILYPAPRKADSSNTRI*S*LEIWGK*VAPMWNSLPEVQSLPTMCPTEWLHDHGHCLSAWEA*S*CVKLSM*A*HQTH  445
                +L  W WQLLLAF WF  QY*WF  EGRHS FCGE*AP *FRSFSSNHF*TIGRECLC +*+DC ILYPAPRKADS NTRI*S*LEIWGK VAPMWNS+PEVQSLPTM P +WLHD+GHC S WEA*S*CV+LS+*A*H +H
Subject   3270  FLCAW*WQLLLAFSWFLTQY*WFCFEGRHSIFCGE*APG*FRSFSSNHF*TIGRECLCRK*NDCTILYPAPRKADSDNTRI*S*LEIWGKRVAPMWNSVPEVQSLPTMRPNKWLHDYGHCFSTWEA*S*CVELSV*A*H*SH  3695

Range 3: 3277 to 3708 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
254.9 bits(550) 0.0 115/144(80%) 0/144(0%) Plus/Minus
Query        7  QNVLGVFGARPT*II*HINFRPPKR*GNGRDHATIQWGTWLEVIGLQAKNST*GPLTFPKFPTNFIFWCYYYQPYVVPDTK*CNHXXXXXXXXFQLFRNGWS*KI*TNKALTLHKRSNACLQSETISTEQETI*MPKAIAMTRY  438
                Q +  V  AR T II HINF PPK * NGR+HATI WG WLEVIG QA+NST*GPL FPKFPTNFIFWCY+YQPYVVPDTK*CNH I  ISILFQLFRNGWS*KI*TN+ALTLHKRSNA LQS+TISTE ET *MPKAIA+TR+
Subject   3277  QLLKNVISARLTQIIQHINFTPPKC*SNGRNHATIYWGAWLEVIGPQAQNST*GPLAFPKFPTNFIFWCYHYQPYVVPDTK*CNHFIFGISILFQLFRNGWS*KI*TNQALTLHKRSNAGLQSKTISTE*ETN*MPKAIAITRH  3708

Range 4: 3468 to 3689 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
165.1 bits(354) 0.0 69/74(93%) 0/74(0%) Plus/Minus
Query       26  LVLGLHR*FNTSTSGLPSAEAMAVIMQPFSGAHGWK*LDFRQRIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQ  247
                LVLGLHR*FNTSTS LPSAEAMAVIMQPF GAHGWK*LD R RIPHRGHSLSPNFQLTSYSGV TISLTWCRIQ
Subject   3468  LVLGLHR*FNTSTSRLPSAEAMAVIMQPFIGAHGWK*LDLRHRIPHRGHSLSPNFQLTSYSGVITISLTWCRIQ  3689

Range 5: 3273 to 3422 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.0 bits(225) 0.0 44/50(88%) 0/50(0%) Plus/Minus
Query      293  CLEMVGAERSELIRRSLSTKGRMPAFRAKPSVLSRKPSECQKQLP*PGTE  442
                CLEMVGAERSEL RRSLSTK RMPAF+AKPSVLS+KP+ECQKQLP PGTE
Subject   3273  CLEMVGAERSELTRRSLSTKDRMPAFKAKPSVLSKKPTECQKQLPSPGTE  3422

Range 6: 3272 to 3694 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
246.7 bits(532) 0.0 113/141(80%) 0/141(0%) Plus/Minus
Query       21  CVWC*AYIDNLTHQLQASQALRQWP*SCNHSVGHMVGSDWTSGKEFHIGATHFPQISNXXXXXXXXXXXXRGAGYKIMQSSHSQHKHSLPIV*KWLELKDLN**GAHSPQKVECLPSERNHQY*AGNHLNAKSNCHDQVRR  443
                C  C*AY DN THQL ASQ L+QWP*SCNH +G MVGSDWTSG EFHIGAT FPQISN*LHILVL LSALRGAGYKI+QS H +HKHSLPIV*KWLELKDLN* GAHSPQK+EC PS++NHQY*  N LNAKSNCH Q +R
Subject   3272  CD*C*AYTDNSTHQLHASQVLKQWP*SCNHLLGRMVGSDWTSGTEFHIGATRFPQISN*LHILVLSLSALRGAGYKIVQSFHFRHKHSLPIV*KWLELKDLN*PGAHSPQKIECRPSKQNHQY*VRNQLNAKSNCHHQAQR  3694

Range 7: 3266 to 3685 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
232.9 bits(502) 0.0 119/140(85%) 0/140(0%) Minus/Plus
Query       30  TLSPYLVMAIAFGIQMVSCSVLMVSL*RQAFDLLWRVSALLVQIFQLQPFLNNWKXXXXXXXXXLHYFVSGTT*G****HQNMKLVGNLGKVSGPYVEFFA*SPITSNHVPH*MVA*SRPLPQRLGGLKLMC*IIYVGLA  449
                TLS  LVMAIAFGIQ+VS SVLMV L*R AFDLLWRVSA LVQIFQLQPFLNNWKRMLM +M+*LHYFVSGTT*G****HQNMKLVGNLGK SGPYVEF A* PITSNH P *MVA* RPL Q LGG+KLMC*II V LA
Subject   3266  TLSLCLVMAIAFGIQLVSYSVLMVLL*RPAFDLLWRVSAWLVQIFQLQPFLNNWKRMLMPKMK*LHYFVSGTT*G****HQNMKLVGNLGKASGPYVEFCA*GPITSNHAPQ*MVA*LRPLLQHLGGVKLMC*IICVSLA  3685

Nucleotide Sequence (1061 letters)

Query ID:ds2016-58_48
Query definition:No definition line
Query length:589
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 13 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
107
214
321
428
535
642
749
856
963
1061

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate TEMP BR replicase, 24.4 kDa protein, 12.8 kDa protein, 8.4 kDa protein, and 28 kDa protein genes, complete cds

Sequence ID: KX925556.1 Length: 8700 Number of Matches: 7

Range 1: 3668 to 4693 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
797.9 bits(1735) 0.0 332/342(97%) 0/342(0%) Minus/Plus
Query       24  PSTNHIFEELCQGGGLNMMYLAETFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIKIDELRKVKRSALDLLSMNGSKITYFPNFERAEKLQGCLLGGLTGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLPTPNTP  1049
                PSTNHIFEELCQGGGLNMMYLAE FEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIK+DELRKVKRSALDLLSMNGS+ITYFPNFERAEKLQGCLLGGLTGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDD CKVAKAGKSKKEGWDVVTFEVFLRKVS LKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLL     P
Subject   3668  PSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSRITYFPNFERAEKLQGCLLGGLTGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKVSSLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKGP  4693

Range 2: 3667 to 4692 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
722.7 bits(1571) 0.0 324/342(95%) 0/342(0%) Plus/Minus
Query       25  GVFGVGRRKSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTKRLLSMLYLYVFPXXXXXXXXXXAPKIARSFCESYVLWHGSPASEMKASLRMTSKHRSIYPGGNN*TSSKITQCPAFKPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLGFISAVDIPESQGFASLNFSSLITPVRPPSKHPCNFSARSKFGK*VILDPFIERRSRADRLTFLNSSIFML*GPLPIFSTCLMCSLVISNKAEILPFGLMTSISPFISHLAQISKASKVSAKYIILSPPPWHSSSKMWLVLG  1050
                G F + RRKSCILWKIA*SAKAAVIEPFLK*HG+LDSNIGFTKRLLSMLYLYVFPSSSLS+SLCSAP+IARSFCESYVLWHGSPASEMKASLRMTSKHRSIYPGGN+*TSSKITQ PAFK ETFLRKTSKVTTSHPSFFDLPALATLQ SSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLG ISAVDIPESQGFASLNFSSL+TPVRPPSKHPCNFSARSKFGK*VILDPFIERRSRADRLTFLNSS FML*GPLPIFSTCLMCSLVISN+AEILPFGLMTSISPF+SHLAQISKASK SAKYIILSPPPWHSSSKM LVLG
Subject   3667  GPFDLARRKSCILWKIA*SAKAAVIEPFLK*HGNLDSNIGFTKRLLSMLYLYVFPSSSLSISLCSAPRIARSFCESYVLWHGSPASEMKASLRMTSKHRSIYPGGNS*TSSKITQ*PAFKLETFLRKTSKVTTSHPSFFDLPALATLQLSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLGLISAVDIPESQGFASLNFSSLMTPVRPPSKHPCNFSARSKFGK*VILDPFIERRSRADRLTFLNSSTFML*GPLPIFSTCLMCSLVISNRAEILPFGLMTSISPFMSHLAQISKASKASAKYIILSPPPWHSSSKM*LVLG  4692

Range 3: 3659 to 4678 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
680.1 bits(1478) 0.0 302/340(89%) 0/340(0%) Plus/Minus
Query       39  R*EEVMHIVEDCIISKGCSH*TFFEVTWQSRFKHWVHKTSAFYVVPICLSFKQSEYVTLLSSQNCSXXXXXXXXXXWITSK*NESITAYDK*TQIDISRGKQLNLIENHTMPSLQTRNFSKENFKGHYIPPFLL*FACFGNFAAIIHFKIIFD*ICQGSSRGNKSNKFSLRSLHETLIQETLSSPKCAKHDS*LSWLYIRS*YTRKPGFCITELFITYNTS*AP*QAPLQLFSPLKVWKIGYFGPIH*KKIKGGSLNLPQLIYFYALRAIADLLNMPYVLIGYIKQGGNLTIWVNDLNFPIYITLSANIKGLKSLSQVHHIKPSPLAQLLKNVVGARPTR  1058
                R EEVMHI+EDCIISKG SH*TFFEVTW SRFKHWVHKT AFYVVP+ LSFKQSEY+TLLSSQNC+ILL*IICALAWITSK*+ESITAYDK*T IDISRGKQLNLIENHTM  LQTRNFSKEN K H+IPPFLL*FACFGNFAAIIHFKIIFD*IC GSSRGNKS KFS R LHETLIQETLSSPKCAKHDS*LSWL I S*YTRKPGFCITELFITY+TS*AP*QAPLQLFSPLKVWKIGY GPIH*KK+KG  LNLPQ IYFYALRAIADLL+MPYVLIGYIKQG NLTIWVNDLNFPIY+TLSANIKG KS SQVHHIKPS LAQLLKNV+ AR T+
Subject   3659  RQEEVMHIMEDCIISKGSSH*TFFEVTW*SRFKHWVHKTPAFYVVPVRLSFKQSEYITLLSSQNCTILL*IICALAWITSK*DESITAYDK*T*IDISRGKQLNLIENHTMTGLQTRNFSKENLKSHHIPPFLL*FACFGNFAAIIHFKIIFD*IC*GSSRGNKSYKFSFRPLHETLIQETLSSPKCAKHDS*LSWLNICS*YTRKPGFCITELFITYDTS*AP*QAPLQLFSPLKVWKIGYSGPIH*KKVKGRPLNLPQFIYFYALRAIADLLDMPYVLIGYIKQGRNLTIWVNDLNFPIYVTLSANIKGFKSFSQVHHIKPSSLAQLLKNVISARSTQ  4678

Range 4: 3670 to 4686 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
675.5 bits(1468) 0.0 293/339(86%) 0/339(0%) Minus/Plus
Query       31  *HQPHF*GAVPGGRA*YDVLG*DF*GL*YLR*V*YKWGN*GH*PKW*DFRLV*YNQ*AHKAC*EDRQWPSEHKNR*VEEG*AIRP*SSFNEWVQNNLFSKL*AG*KVARVLARGPNWCYK**KVQ*CKTLAFWYINCGYKAKRANCRAWHIWGWKEFLV*EFHEEI*GKICYFCFP*TSLGKFNQK*S*NG*WLQSCQSRQIKEGRVGCSDL*SFP*KSFWFEGWALCDFR*GSVVSPWIYRSVFTCHTQ*CFHFTCW*SMPEHI*FTEGSSNFGS*AE*HTQTA*RKDI*VQHRKQTFCEPNV*I*TAMSLQKRFNDCSLC*LCNLPQYA*LPPTDPK  1047
                *H  HF*GAVPG RA*YDVLG* F* L*YLR*V*+KWGN*GH*PKW*DF  V*YNQ*AHKAC EDRQWPSEHK+R*+EEG*A+ P* SFNEWVQNNLFSKL*AG*KVARVLARGPNWC+K**KVQ*CKTLAFWYINC Y AKRANCRAWHIWGWKEFLV*EFHEE+* KIC FCFP TSL KFNQK*S*NG* LQSCQSRQIKEGRVGC D * FP*KSF FEG +LCDFR*GS VSPWIYRS+FTCHTQ*CFH TCW*SMPEHI*FT+GS N GS*AE*+TQTA*RKD+ VQHRKQ FCEPNV*I*  MSLQKRFNDC LC*LCNLP YA*LPP + K
Subject   3670  *H*SHF*GAVPGRRA*YDVLG*SF*SL*YLR*V*HKWGN*GH*PKW*DFCPV*YNQ*AHKACREDRQWPSEHKSR*IEEG*AVCP*PSFNEWVQNNLFSKL*AG*KVARVLARGPNWCHK**KVQ*CKTLAFWYINCRY*AKRANCRAWHIWGWKEFLV*EFHEEV*RKICNFCFPETSLSKFNQK*S*NG**LQSCQSRQIKEGRVGCGDF*GFP*KSF*FEGRSLCDFR*GSAVSPWIYRSMFTCHTQ*CFHLTCW*SMPEHI*FTKGSCNSGS*AE*YTQTA*RKDVQVQHRKQAFCEPNV*I*ITMSLQKRFNDCCLC*LCNLP*YA*LPPGEVK  4686

Range 5: 3663 to 4694 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
643.9 bits(1399) 0.0 301/344(88%) 0/344(0%) Minus/Plus
Query       23  VGLAPTTFLRSCARGEGLI*CTWLRLLRPLIFALSVI*MGKLRSLTQMVRFPPCLI*PMST*GMLRRSAMALRA*K*MS*GRLSDPPLIFFQ*MGPK*PIFQTLSGLKSCKGAC*GA*LVL*VMKSSVMQNPGFLVYQLRI*SQES*LSCLAHLGLERVSCIRVS*RDLRENLLLLFPLDEPWQIQSKMILKWMMAAKLPKQANQRRKGGM**PLKFSLEKFLV*RLGIV*FSMRFSCFPLDISICVYLSYAVMLSFHLLVIHARAHMIHRRIEQFWELSRVTYSDCLKERHIGTT*KADVL*TQCLNLDCHVTSKKVQ*LQPLLIMQSSTICMTSSYRPQTHP  1054
                V LA  TFLRSCAR EGLI*CTWL+LL+PLIFALSV *MGKLRSLTQMVRF PCLI*PMST*GM RRSAMALRA*K*M+*GRLS  PL FFQ*MGP+*PIFQTLSGLKSCKGAC*GA*LV *VMKSSVMQNPGFLVYQL+I SQES*LSCLAHLGLERVSCIRVS*R L+ENL LLFP DEP QIQSKMILKWM+AAKLPKQANQRRKGGM * L+FSLEKFLV*R  IV*FSMRFSCFPLDISI VYLSYAVMLS HLLVIHARAHMIH+RI QFWELSRV YSDCLKER  GTT*KA VL*TQCLNLD HVTSKKVQ*L PLLIMQSS ICMTSS+R Q  P
Subject   3663  VDLALITFLRSCAREEGLI*CTWLKLLKPLIFALSVT*MGKLRSLTQMVRFLPCLI*PMST*GMSRRSAMALRA*K*MN*GRLSGLPLTFFQ*MGPE*PIFQTLSGLKSCKGAC*GA*LVS*VMKSSVMQNPGFLVYQLQILSQES*LSCLAHLGLERVSCIRVS*RGLKENL*LLFPRDEP*QIQSKMILKWMIAAKLPKQANQRRKGGMW*LLRFSLEKFLV*RPVIV*FSMRFSCFPLDISIYVYLSYAVMLSSHLLVIHARAHMIHKRIVQFWELSRVIYSDCLKERRTGTT*KAGVL*TQCLNLDYHVTSKKVQ*LLPLLIMQSSIICMTSSWRGQKGP  4694

Range 6: 4053 to 4685 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
416.7 bits(903) 0.0 181/211(86%) 0/211(0%) Plus/Minus
Query       32  LGSVGGSHAYCGRLHNQQRLQSLNLF*SDMAV*IQTLGSQNVCFLCCTYMSFLQAV*VCHSAQLPKLLDPSVNHMCSGMDHQQVK*KHHCV*QVNTDRYIQGETTEPHRKSHNAQPSNQKLF*GKLQRSLHPTLPSLICLLWQLCSHHPFQDHF*LNLPRLV*GKQK*QIFPQISS*NSYTRNSFQPQMCQARQLALLALYPQLIYQKARV  664
                L S GGSHAY GRLHNQQR QSLNLF*SDM +*IQTLGSQN CFLCCT  SFLQAV*V HSAQLP+L DP VNHMCSGMDHQQV+*KHHCV*QVN DRYIQGET EPHRKSHN +PSN KLF*GK Q+S HPTLPSLICLLWQLCS+HPFQDHF*LNL RLV GKQK QIF Q SS*NSYTRNSFQPQMCQARQLALLA Y QLIYQKARV
Subject   4053  LTSPGGSHAYYGRLHNQQRQQSLNLF*SDMVI*IQTLGSQNACFLCCTCTSFLQAV*VYHSAQLPELHDPFVNHMCSGMDHQQVR*KHHCV*QVNIDRYIQGETAEPHRKSHNDRPSN*KLF*GKPQKSPHPTLPSLICLLWQLCSYHPFQDHF*LNLLRLVSGKQKLQIFLQTSS*NSYTRNSFQPQMCQARQLALLA*YLQLIYQKARV  4685

Range 7: 3669 to 4013 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
242.1 bits(522) 0.0 101/115(88%) 0/115(0%) Plus/Minus
Query      704  GPLASTLATFQPAQSLENRLFWTHSLKEDQGRIA*PSSTHLFLCSEGHCRSSQHALCAHWLYQTRRKSYHLG**PQFPHLYHT*RKYQRPQKSQPSTSY*ALPPGTAPQKCGWC*  1048
                GPLASTLATFQPAQSLENRLFWTHSLKE QG+ A*PSS HL LCSEGHCRSS+HALCAHWLYQT +KSYHLG**PQFPHL HT*RKYQR QK QPSTSY*AL PGTAPQKC  C*
Subject   3669  GPLASTLATFQPAQSLENRLFWTHSLKEGQGQTA*PSSIHLLLCSEGHCRSSRHALCAHWLYQTGQKSYHLG**PQFPHLCHT*RKYQRLQKLQPSTSY*ALLPGTAPQKCD*C*  4013

Grapevine rupestris stem pitting associated virus isolate SK704 C, complete genome

Sequence ID: KX274276.1 Length: 8726 Number of Matches: 7

Range 1: 3680 to 4705 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
796.5 bits(1732) 0.0 330/342(96%) 0/342(0%) Minus/Plus
Query       24  PSTNHIFEELCQGGGLNMMYLAETFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIKIDELRKVKRSALDLLSMNGSKITYFPNFERAEKLQGCLLGGLTGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLPTPNTP  1049
                PSTNHIFEELCQGGGLNMMYL E FEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIK+DELRKVKRSALDLLSMNGSKITYFPNFERAEKLQGCLLGGLTGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKS+LYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIR+DAFISLAGDPCQSTYDSQKDRAILGAEQSDILR+LEGKTYRYNIESRRFVNPMFE RLPCHFKKGSMTAAFADYAIFHNMHDFLL     P
Subject   3680  PSTNHIFEELCQGGGLNMMYLTEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPNFERAEKLQGCLLGGLTGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKSYLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRNDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRMLEGKTYRYNIESRRFVNPMFEFRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKGP  4705

Range 2: 3679 to 4704 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
721.4 bits(1568) 0.0 318/342(93%) 0/342(0%) Plus/Minus
Query       25  GVFGVGRRKSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTKRLLSMLYLYVFPXXXXXXXXXXAPKIARSFCESYVLWHGSPASEMKASLRMTSKHRSIYPGGNN*TSSKITQCPAFKPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLGFISAVDIPESQGFASLNFSSLITPVRPPSKHPCNFSARSKFGK*VILDPFIERRSRADRLTFLNSSIFML*GPLPIFSTCLMCSLVISNKAEILPFGLMTSISPFISHLAQISKASKVSAKYIILSPPPWHSSSKMWLVLG  1050
                G F + RRKSC+LWKIA*SAKAAVIEPFLK*HGSL+SNIGFT RLLSMLYLYVFPSS LSMSLCSAPKIARSFCESYVLWHGSPASEMKASLRMTS+HRS+YPGGNN*TSSKITQ PAF+PETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYK LFPAPNVPSTTVSSLG ISAVDIPESQGFASLNFSSL+TPVRPPSKHPC+FSARSKFGK*VILDPFIERRSRADRLTFLNSS FML*GPLPIFSTCLMCSLVISNKAEILPFGL+TSISPF+SH AQ+SKASK S KYI+LSPPPWHSSSKMWLVLG
Subject   3679  GPFDLARRKSCMLWKIA*SAKAAVIEPFLK*HGSLNSNIGFTNRLLSMLYLYVFPSSILSMSLCSAPKIARSFCESYVLWHGSPASEMKASLRMTSRHRSMYPGGNN*TSSKITQWPAFRPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYK*LFPAPNVPSTTVSSLGLISAVDIPESQGFASLNFSSLMTPVRPPSKHPCSFSARSKFGK*VILDPFIERRSRADRLTFLNSSTFML*GPLPIFSTCLMCSLVISNKAEILPFGLITSISPFMSHFAQMSKASKASVKYIMLSPPPWHSSSKMWLVLG  4704

Range 3: 3679 to 4704 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
667.8 bits(1451) 0.0 286/342(84%) 0/342(0%) Minus/Plus
Query       25  A*HQPHF*GAVPGGRA*YDVLG*DF*GL*YLR*V*YKWGN*GH*PKW*DFRLV*YNQ*AHKAC*EDRQWPSEHKNR*VEEG*AIRP*SSFNEWVQNNLFSKL*AG*KVARVLARGPNWCYK**KVQ*CKTLAFWYINCGYKAKRANCRAWHIWGWKEFLV*EFHEEI*GKICYFCFP*TSLGKFNQK*S*NG*WLQSCQSRQIKEGRVGCSDL*SFP*KSFWFEGWALCDFR*GSVVSPWIYRSVFTCHTQ*CFHFTCW*SMPEHI*FTEGSSNFGS*AE*HTQTA*RKDI*VQHRKQTFCEPNV*I*TAMSLQKRFNDCSLC*LCNLPQYA*LPPTDPKHT  1050
                A*H PHF*GAVPG RA*+DVL * F*G *+LR V*+KWGN*G+*PKW*DFRLV*YNQ*AHKAC*ED QWPSEHK+R*+EEG*AIRP*SSFNEWVQ+NLF +L*AG*K ARV ARGP+WC+K**KVQ*CKTLAFWYINCGY AKRANCRAWHIWGWKE LV*+FHEE+* KIC FCFP*TSLGKFNQ+*S*NG*WLQSCQSRQIKEGRVGCS+ * FP*KSFW EGW LCDFR*GSVVSPWI+ S+  CHTQ* FHFTCW*SMPEHI*FT+GS  FGS*AE HTQ A*RKD+*VQHRKQT CEPNV*I*T MSLQK  NDC LC*LCNLP +A*LPP + K +
Subject   3679  A*H*PHF*GAVPGRRA*HDVLD*SF*GF*HLREV*HKWGN*GY*PKW*DFRLV*YNQ*AHKAC*EDWQWPSEHKSR*IEEG*AIRP*SSFNEWVQDNLFPEL*AG*KAARVFARGPDWCHK**KVQ*CKTLAFWYINCGY*AKRANCRAWHIWGWKELLV*KFHEEV*RKICNFCFP*TSLGKFNQE*S*NG*WLQSCQSRQIKEGRVGCSNF*GFP*KSFWSEGWPLCDFR*GSVVSPWIH*SMSACHTQ*RFHFTCW*SMPEHI*FTKGSGYFGS*AERHTQNA*RKDV*VQHRKQTVCEPNV*I*TTMSLQKGLNDCCLC*LCNLP*HA*LPPGEVKRS  4704

Range 4: 3671 to 4690 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
655.4 bits(1424) 0.0 291/340(86%) 0/340(0%) Plus/Minus
Query       39  R*EEVMHIVEDCIISKGCSH*TFFEVTWQSRFKHWVHKTSAFYVVPICLSFKQSEYVTLLSSQNCSXXXXXXXXXXWITSK*NESITAYDK*TQIDISRGKQLNLIENHTMPSLQTRNFSKENFKGHYIPPFLL*FACFGNFAAIIHFKIIFD*ICQGSSRGNKSNKFSLRSLHETLIQETLSSPKCAKHDS*LSWLYIRS*YTRKPGFCITELFITYNTS*AP*QAPLQLFSPLKVWKIGYFGPIH*KKIKGGSLNLPQLIYFYALRAIADLLNMPYVLIGYIKQGGNLTIWVNDLNFPIYITLSANIKGLKSLSQVHHIKPSPLAQLLKNVVGARPTR  1058
                R EEVMH++EDCIISKG SH*  FEVTW S+FKHWVHK SAFYVVPI LSFK SEYV LLSSQN  ILL*IICALAWITSK*NES+ AYDK T I++SRGKQLNLIENHTM SLQTRNFSKEN K +YIPPFLL*FACFGNFAAIIHFKII D*ICQGSSRGNKS KFS R LHET IQ TLSSPKCAKHDS*LSWL IRS*YTRKPGFCITELFITY+TS AP*Q PLQLFSPLKV +IGY GPIH*KKIKGGSLNLPQ IYFYALRAIA+LLNMPYVLIGYIKQGGNLTIWVN+LNFPIY+TL AN+K LKS SQVHH+KPS LAQLLKNVV ARPT+
Subject   3671  RQEEVMHVMEDCIISKGSSH*ALFEVTW*SKFKHWVHKPSAFYVVPIRLSFKHSEYVALLSSQNSPILL*IICALAWITSK*NESVIAYDKQT*INVSRGKQLNLIENHTMASLQTRNFSKENLKSYYIPPFLL*FACFGNFAAIIHFKIILD*ICQGSSRGNKSYKFSFRPLHETFIQVTLSSPKCAKHDS*LSWLNIRS*YTRKPGFCITELFITYDTSQAP*QTPLQLFSPLKVREIGYLGPIH*KKIKGGSLNLPQFIYFYALRAIANLLNMPYVLIGYIKQGGNLTIWVNNLNFPIYVTLRANVKSLKSFSQVHHVKPSSLAQLLKNVVSARPTQ  4690

Range 5: 3675 to 4706 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
636.1 bits(1382) 0.0 294/344(85%) 0/344(0%) Minus/Plus
Query       23  VGLAPTTFLRSCARGEGLI*CTWLRLLRPLIFALSVI*MGKLRSLTQMVRFPPCLI*PMST*GMLRRSAMALRA*K*MS*GRLSDPPLIFFQ*MGPK*PIFQTLSGLKSCKGAC*GA*LVL*VMKSSVMQNPGFLVYQLRI*SQES*LSCLAHLGLERVSCIRVS*RDLRENLLLLFPLDEPWQIQSKMILKWMMAAKLPKQANQRRKGGM**PLKFSLEKFLV*RLGIV*FSMRFSCFPLDISICVYLSYAVMLSFHLLVIHARAHMIHRRIEQFWELSRVTYSDCLKERHIGTT*KADVL*TQCLNLDCHVTSKKVQ*LQPLLIMQSSTICMTSSYRPQTHP  1054
                VGLA TTFLRSCAR EGL *CT L+LLR L FA SV *MGKLR LTQMVRFPPCLI*PMST*GMLRR AMALRA*K*M+*GRLSDPPLIFFQ*MGP+*PI +TLSGLKSCKG C*GA*LV *VMKSSVMQNPGFLVYQLRI SQES*LSCLAHLGLERV+CI+VS*R L+ENL LLFPLDEPWQIQS+MILKWMMAAKLPKQANQRRKGGM** L+FSLEKFLV*RL IV*FSMRFSCFPLD  I V LSYA+ LSFHLLVIHARAHMIH+RI  FWELSR TYS+CLKER IGTT*KAD L*TQCLNLD HVTSK+ Q*L PLLIMQSS  CMTSS+R Q  P
Subject   3675  VGLALTTFLRSCAREEGLT*CT*LKLLRLLTFARSVT*MGKLRLLTQMVRFPPCLI*PMST*GMLRRLAMALRA*K*MN*GRLSDPPLIFFQ*MGPR*PISRTLSGLKSCKGVC*GA*LVS*VMKSSVMQNPGFLVYQLRILSQES*LSCLAHLGLERVTCIKVS*RGLKENL*LLFPLDEPWQIQSRMILKWMMAAKLPKQANQRRKGGM**LLRFSLEKFLV*RLAIV*FSMRFSCFPLDTLIYVCLSYAMTLSFHLLVIHARAHMIHKRIGLFWELSRATYSECLKERRIGTT*KADGL*TQCLNLDYHVTSKRAQ*LLPLLIMQSSITCMTSSWRGQKVP  4706

Range 6: 4065 to 4697 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
408.0 bits(884) 0.0 178/211(84%) 0/211(0%) Plus/Minus
Query       32  LGSVGGSHAYCGRLHNQQRLQSLNLF*SDMAV*IQTLGSQNVCFLCCTYMSFLQAV*VCHSAQLPKLLDPSVNHMCSGMDHQQVK*KHHCV*QVNTDRYIQGETTEPHRKSHNAQPSNQKLF*GKLQRSLHPTLPSLICLLWQLCSHHPFQDHF*LNLPRLV*GKQK*QIFPQISS*NSYTRNSFQPQMCQARQLALLALYPQLIYQKARV  664
                L S GGSHA  GRLHNQQR QSL+ F*SDM V*IQTLGSQ VCFLCCTY SFLQA *VC SAQLPK  DP VNHMCSGMDHQQVK*K HCV*Q + D+ IQGETTEPHRKSHN QPS+QKLF*GK Q+ LHPTLPSLICLLWQLCSHHPFQDH *LNLPRLV*GKQK QIF Q SS*N YT NSFQPQMCQARQLALLA YPQLIYQKARV
Subject   4065  LTSPGGSHACYGRLHNQQRQQSLSPF*SDMVV*IQTLGSQTVCFLCCTYTSFLQAF*VCRSAQLPK*PDPFVNHMCSGMDHQQVK*KRHCV*QADIDQCIQGETTEPHRKSHNGQPSDQKLF*GKPQKLLHPTLPSLICLLWQLCSHHPFQDHS*LNLPRLV*GKQKLQIFLQTSS*NFYTSNSFQPQMCQARQLALLA*YPQLIYQKARV  4697

Range 7: 3678 to 4025 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
235.2 bits(507) 0.0 99/116(85%) 0/116(0%) Plus/Minus
Query      704  GPLASTLATFQPAQSLENRLFWTHSLKEDQGRIA*PSSTHLFLCSEGHCRSSQHALCAHWLYQTRRKSYHLG**PQFPHLYHT*RKYQRPQKSQPSTSY*ALPPGTAPQKCGWC*A  1051
                GPLA+TLA FQPAQS  NRL WTHSLKEDQGRIA*PSS HL LCSEGHC+SSQHALCAHWLYQTRRKSYHLG**PQFPHL HT RK Q+PQK Q STS *AL PGTAPQKCG C*A
Subject   3678  GPLANTLAAFQPAQSSGNRLSWTHSLKEDQGRIA*PSSIHLLLCSEGHCQSSQHALCAHWLYQTRRKSYHLG**PQFPHLCHTSRKCQKPQKLQSSTSC*ALLPGTAPQKCG*C*A  4025

Rupestris stem pitting associated virus strain SG1, complete genome

Sequence ID: AY881626.1 Length: 8742 Number of Matches: 7

Range 1: 3679 to 4704 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
795.6 bits(1730) 0.0 332/342(97%) 0/342(0%) Minus/Plus
Query       24  PSTNHIFEELCQGGGLNMMYLAETFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIKIDELRKVKRSALDLLSMNGSKITYFPNFERAEKLQGCLLGGLTGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLPTPNTP  1049
                PSTNHIFEELCQGGGLNMMYLAE FEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIK+DELRKVKRSALDLLSMNGSKITYFPNFERAEKLQGCLLGGLTGVISDEKFSDAKPWLSGIS ADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDIL+LLEGKTYRYNIESRRFVNPMFESRLPC FKKGSMTAAFADYAIFHNMHDFLL     P
Subject   3679  PSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPNFERAEKLQGCLLGGLTGVISDEKFSDAKPWLSGISIADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILKLLEGKTYRYNIESRRFVNPMFESRLPCLFKKGSMTAAFADYAIFHNMHDFLLARSKGP  4704

Range 2: 3678 to 4703 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
719.1 bits(1563) 0.0 324/342(95%) 0/342(0%) Plus/Minus
Query       25  GVFGVGRRKSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTKRLLSMLYLYVFPXXXXXXXXXXAPKIARSFCESYVLWHGSPASEMKASLRMTSKHRSIYPGGNN*TSSKITQCPAFKPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLGFISAVDIPESQGFASLNFSSLITPVRPPSKHPCNFSARSKFGK*VILDPFIERRSRADRLTFLNSSIFML*GPLPIFSTCLMCSLVISNKAEILPFGLMTSISPFISHLAQISKASKVSAKYIILSPPPWHSSSKMWLVLG  1050
                G F + RRKSCIL KIA*SAKAAVIEPFLK HGSLDSNIGFTKRLLSMLYL VFPSSSLSMSLCSAP+IARSFCESYVLWHGSPASEMKASLRMTSKHRSIYPGGNN*TSSKITQ PAFKPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLG ISA+DIPESQGFASLNFSSL+TPVRPPSKHPC+FSARSKFGK*VILDPFIERRSRADRLTFLNSS FML*GPLPIFSTCLMCSLVISNKAEILPFGL+TSISPF+SHLAQISKASK SAKYIILSPPPWHSSSKM LVLG
Subject   3678  GPFDLARRKSCIL*KIA*SAKAAVIEPFLKRHGSLDSNIGFTKRLLSMLYL*VFPSSSLSMSLCSAPRIARSFCESYVLWHGSPASEMKASLRMTSKHRSIYPGGNN*TSSKITQWPAFKPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLGLISAIDIPESQGFASLNFSSLMTPVRPPSKHPCSFSARSKFGK*VILDPFIERRSRADRLTFLNSSTFML*GPLPIFSTCLMCSLVISNKAEILPFGLITSISPFMSHLAQISKASKASAKYIILSPPPWHSSSKM*LVLG  4703

Range 3: 3678 to 4685 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
665.0 bits(1445) 0.0 286/336(85%) 0/336(0%) Minus/Plus
Query       43  A*HQPHF*GAVPGGRA*YDVLG*DF*GL*YLR*V*YKWGN*GH*PKW*DFRLV*YNQ*AHKAC*EDRQWPSEHKNR*VEEG*AIRP*SSFNEWVQNNLFSKL*AG*KVARVLARGPNWCYK**KVQ*CKTLAFWYINCGYKAKRANCRAWHIWGWKEFLV*EFHEEI*GKICYFCFP*TSLGKFNQK*S*NG*WLQSCQSRQIKEGRVGCSDL*SFP*KSFWFEGWALCDFR*GSVVSPWIYRSVFTCHTQ*CFHFTCW*SMPEHI*FTEGSSNFGS*AE*HTQTA*RKDI*VQHRKQTFCEPNV*I*TAMSLQKRFNDCSLC*LCNLPQYA*LPP  1050
                A*H  HF*GAVPG RA*YDVLG* F*G *YLR*V*+KWGN*G+*PKW*DFR V*YNQ*AHKAC*EDRQWPSEHK+R*+E+G*AIRP* SF+EWVQNNLFSKL*AG*K A VLARGPNWC+K**KVQ*CKTLAFW IN GY AKRANCRAWH+WGWKEFLV*EFHEE+* KIC  C P TSLGKFNQK*S*NG*WLQSC SRQIKEGRVGCSD * FP*KSFWFEGW LC+FR*GSVVSPWIYRS+F CHT *CFHFTC * MPEHI FT+GS N GS*AE*HTQTA*R+D+ VQHRKQTFCEPNV*I*T MSLQK FNDC  C*LCN  QYA*L P
Subject   3678  A*H*SHF*GAVPGWRA*YDVLG*SF*GF*YLR*V*HKWGN*GY*PKW*DFRFV*YNQ*AHKAC*EDRQWPSEHKSR*IEKG*AIRP*PSFDEWVQNNLFSKL*AG*KAAGVLARGPNWCHK**KVQ*CKTLAFWNINRGY*AKRANCRAWHVWGWKEFLV*EFHEEV*RKICNLCLPQTSLGKFNQK*S*NG*WLQSC*SRQIKEGRVGCSDF*GFP*KSFWFEGWPLCNFR*GSVVSPWIYRSMFACHT**CFHFTCR*PMPEHIRFTKGSGNSGS*AE*HTQTA*REDLQVQHRKQTFCEPNV*I*TTMSLQKGFNDCCFC*LCNFSQYA*LSP  4685

Range 4: 3670 to 4683 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
654.0 bits(1421) 0.0 289/338(86%) 0/338(0%) Plus/Minus
Query       45  EEVMHIVEDCIISKGCSH*TFFEVTWQSRFKHWVHKTSAFYVVPICLSFKQSEYVTLLSSQNCSXXXXXXXXXXWITSK*NESITAYDK*TQIDISRGKQLNLIENHTMPSLQTRNFSKENFKGHYIPPFLL*FACFGNFAAIIHFKIIFD*ICQGSSRGNKSNKFSLRSLHETLIQETLSSPKCAKHDS*LSWLYIRS*YTRKPGFCITELFITYNTS*AP*QAPLQLFSPLKVWKIGYFGPIH*KKIKGGSLNLPQLIYFYALRAIADLLNMPYVLIGYIKQGGNLTIWVNDLNFPIYITLSANIKGLKSLSQVHHIKPSPLAQLLKNVVGARPTR  1058
                E+VMHIV++CIISK  SH*T FE TW SRFKHWVHKTSAFYVVP+ L FKQ EYVTLLSSQNC ILL*I+CALAW+T K*NESIT YDK T IDISRGKQLNLIEN+TM SLQTRNFSKEN K HYIPPFLL*FACF NFAAIIHFKIIFD*ICQGSS G+K  KFS R LHETLIQETLSSPK AKHDS*LSWL IR *Y+RKP FCITELFITY+TS*AP*QAPLQLFSPLKVWKIGYFGPIH KK+KGGSLNL Q IYFYALRAIADLLNMPYVLIGYIKQ GNLTIWVN+LNFPIY+TLSANIK LKS SQVHHIKPS LAQLLKNV+ ARPT+
Subject   3670  EKVMHIVKNCIISKSSSH*TLFEETW*SRFKHWVHKTSAFYVVPVSLPFKQFEYVTLLSSQNCPILL*IVCALAWVTGK*NESITTYDKQT*IDISRGKQLNLIENYTMASLQTRNFSKENLKSHYIPPFLL*FACFSNFAAIIHFKIIFD*ICQGSSGGDKGYKFSFRPLHETLIQETLSSPKRAKHDS*LSWLNIRD*YSRKPRFCITELFITYDTS*AP*QAPLQLFSPLKVWKIGYFGPIHRKKVKGGSLNLSQFIYFYALRAIADLLNMPYVLIGYIKQSGNLTIWVNNLNFPIYVTLSANIKSLKSFSQVHHIKPSTLAQLLKNVISARPTQ  4683

Range 5: 4064 to 4684 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
397.9 bits(862) 0.0 171/207(83%) 0/207(0%) Plus/Minus
Query       44  GGSHAYCGRLHNQQRLQSLNLF*SDMAV*IQTLGSQNVCFLCCTYMSFLQAV*VCHSAQLPKLLDPSVNHMCSGMDHQQVK*KHHCV*QVNTDRYIQGETTEPHRKSHNAQPSNQKLF*GKLQRSLHPTLPSLICLLWQLCSHHPFQDHF*LNLPRLV*GKQK*QIFPQISS*NSYTRNSFQPQMCQARQLALLALYPQLIYQKARV  664
                G SHAYC +LHNQQ+ QSLN F* DM V*IQTLGSQNVCFLCCT  S LQAV*VCHSAQLP+L DP VN MCSGM H+QVK*KHH V*Q N DRYIQGETTEPHRK HN QPSNQKLF*GK Q+SLHPTLPSLICLL QLCSHHPFQDHF*LNLPRLV G+Q+ QIF Q SS*NSYTRNSFQPQ CQARQLALLA YP+LI+QKA+V
Subject   4064  GESHAYCEKLHNQQKQQSLNPF*RDMVV*IQTLGSQNVCFLCCTCKSSLQAV*VCHSAQLPELPDPFVNRMCSGMGHRQVK*KHHYV*QANIDRYIQGETTEPHRKLHNGQPSNQKLF*GKPQKSLHPTLPSLICLL*QLCSHHPFQDHF*LNLPRLVWGRQRLQIFLQTSS*NSYTRNSFQPQTCQARQLALLA*YPRLIFQKAKV  4684

Range 6: 3677 to 4024 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
246.2 bits(531) 0.0 102/116(88%) 0/116(0%) Plus/Minus
Query      704  GPLASTLATFQPAQSLENRLFWTHSLKEDQGRIA*PSSTHLFLCSEGHCRSSQHALCAHWLYQTRRKSYHLG**PQFPHLYHT*RKYQRPQKSQPSTSY*ALPPGTAPQKCGWC*A  1051
                GPLAST A FQPAQSLENRLFWTHS KE QGRIA*P S HL LCSEGHCRSSQHALCAHWLYQT+RKSYHLG**PQFPHL HT*RKYQ+PQK QPSTSY*AL PGTAPQKC  C*A
Subject   3677  GPLASTPAAFQPAQSLENRLFWTHSSKEGQGRIA*PFSIHLLLCSEGHCRSSQHALCAHWLYQTKRKSYHLG**PQFPHLCHT*RKYQKPQKLQPSTSY*ALHPGTAPQKCD*C*A  4024

Range 7: 3674 to 4705 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
609.1 bits(1323) 0.0 289/344(84%) 0/344(0%) Minus/Plus
Query       23  VGLAPTTFLRSCARGEGLI*CTWLRLLRPLIFALSVI*MGKLRSLTQMVRFPPCLI*PMST*GMLRRSAMALRA*K*MS*GRLSDPPLIFFQ*MGPK*PIFQTLSGLKSCKGAC*GA*LVL*VMKSSVMQNPGFLVYQLRI*SQES*LSCLAHLGLERVSCIRVS*RDLRENLLLLFPLDEPWQIQSKMILKWMMAAKLPKQANQRRKGGM**PLKFSLEKFLV*RLGIV*FSMRFSCFPLDISICVYLSYAVMLSFHLLVIHARAHMIHRRIEQFWELSRVTYSDCLKERHIGTT*KADVL*TQCLNLDCHVTSKKVQ*LQPLLIMQSSTICMTSSYRPQTHP  1054
                VGLA  TFLRSCAR EGLI*CTWL+LLR LIFALSV *MGKLR LTQMVRFP CLI*PMST*GMLRRSAMALRA*K*M+* RLSDPPL FF+*MGPK*PIFQTLSGLKSC+GAC*GA*LV *VMKSSVMQN GFL YQ RI SQES*LSCLA LGLERVSCIRVS*R L+ENL  L P DEPWQIQSKMILKWMMAAKL KQANQRRKGGM** L+FSLEKFLV*RL IV*FSMRFSCFPLDISI V LSY VMLSFHL V HARAH IH+RI QFWELSRVTYS+CLK R  GTT*KADVL*TQCLNLD HV+SK+VQ*L  LLIMQ  TICMT S++ +  P
Subject   3674  VGLALITFLRSCARVEGLI*CTWLKLLRLLIFALSVT*MGKLRLLTQMVRFPLCLI*PMST*GMLRRSAMALRA*K*MN*ERLSDPPLTFFR*MGPK*PIFQTLSGLKSCRGAC*GA*LVS*VMKSSVMQNLGFLEYQSRILSQES*LSCLARLGLERVSCIRVS*RGLKENL*PLSPPDEPWQIQSKMILKWMMAAKLLKQANQRRKGGM**LLRFSLEKFLV*RLAIV*FSMRFSCFPLDISIYVCLSYVVMLSFHLPVTHARAHTIHKRIGQFWELSRVTYSNCLKGRLTGTT*KADVL*TQCLNLDYHVSSKRVQ*LLLLLIMQFFTICMTFSWQGRKVP  4705

Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome

Sequence ID: JX559646.1 Length: 8726 Number of Matches: 7

Range 1: 3679 to 4704 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
795.6 bits(1730) 0.0 332/342(97%) 0/342(0%) Minus/Plus
Query       24  PSTNHIFEELCQGGGLNMMYLAETFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIKIDELRKVKRSALDLLSMNGSKITYFPNFERAEKLQGCLLGGLTGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLPTPNTP  1049
                PSTNHIFEELCQGGGLNMMYLAE FEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIK+DELRKVKRSALDLLSMNGSKITYFPNFERAEKLQGCLLGGLTGVISDEKFSDAKPWLSGIS ADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDIL+LLEGKTYRYNIESRRFVNPMFESRLPC FKKGSMTAAFADYAIFHNMHDFLL     P
Subject   3679  PSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPNFERAEKLQGCLLGGLTGVISDEKFSDAKPWLSGISIADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILKLLEGKTYRYNIESRRFVNPMFESRLPCLFKKGSMTAAFADYAIFHNMHDFLLARSKGP  4704

Range 2: 3678 to 4703 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
721.4 bits(1568) 0.0 324/342(95%) 0/342(0%) Plus/Minus
Query       25  GVFGVGRRKSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTKRLLSMLYLYVFPXXXXXXXXXXAPKIARSFCESYVLWHGSPASEMKASLRMTSKHRSIYPGGNN*TSSKITQCPAFKPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLGFISAVDIPESQGFASLNFSSLITPVRPPSKHPCNFSARSKFGK*VILDPFIERRSRADRLTFLNSSIFML*GPLPIFSTCLMCSLVISNKAEILPFGLMTSISPFISHLAQISKASKVSAKYIILSPPPWHSSSKMWLVLG  1050
                G F + RRKSCIL KIA*SAKAAVIEPFLK HGSLDSNIGFTKRLLSMLYLYV PSSSLSMSLCSAP+IARSFCESYVLWHGSPASEMKASLRMTSKHRSIYPGGNN*TSSKITQ PAFKPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLG ISA+DIPESQGFASLNFSSL+TPVRPPSKHPC+FSARSKFGK*VILDPFIERRSRADRLTFLNSS FML*GPLPIFSTCLMCSLVISN+AEILPFGL+TSISPFISHLAQISKASK SAKYIILSPPPWHSSSKM LVLG
Subject   3678  GPFDLARRKSCIL*KIA*SAKAAVIEPFLKRHGSLDSNIGFTKRLLSMLYLYVLPSSSLSMSLCSAPRIARSFCESYVLWHGSPASEMKASLRMTSKHRSIYPGGNN*TSSKITQWPAFKPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLGLISAIDIPESQGFASLNFSSLMTPVRPPSKHPCSFSARSKFGK*VILDPFIERRSRADRLTFLNSSTFML*GPLPIFSTCLMCSLVISNRAEILPFGLITSISPFISHLAQISKASKASAKYIILSPPPWHSSSKM*LVLG  4703

Range 3: 3678 to 4685 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
671.9 bits(1460) 0.0 289/336(86%) 0/336(0%) Minus/Plus
Query       43  A*HQPHF*GAVPGGRA*YDVLG*DF*GL*YLR*V*YKWGN*GH*PKW*DFRLV*YNQ*AHKAC*EDRQWPSEHKNR*VEEG*AIRP*SSFNEWVQNNLFSKL*AG*KVARVLARGPNWCYK**KVQ*CKTLAFWYINCGYKAKRANCRAWHIWGWKEFLV*EFHEEI*GKICYFCFP*TSLGKFNQK*S*NG*WLQSCQSRQIKEGRVGCSDL*SFP*KSFWFEGWALCDFR*GSVVSPWIYRSVFTCHTQ*CFHFTCW*SMPEHI*FTEGSSNFGS*AE*HTQTA*RKDI*VQHRKQTFCEPNV*I*TAMSLQKRFNDCSLC*LCNLPQYA*LPP  1050
                A*H  HF*GAVPG RA*YDVLG* F*G *YLR*V*YKWGN*G+*PKW*DFR V*YNQ*AHKAC*EDRQWPSEHK+R*+E+G*AIRP* SFNEWVQNNLFSKL*AG*K A VLARGPNWC+K**KVQ*CKTLAFW IN GY AKRANCRAWH+WGWKEFLV*EFHEE+* KIC  C P TSLGKFNQK*S*NG*WLQSC SRQIKEGRVGCSD * FP*KSFWFEGW LC+FR*GSVVSPWIYRS+F CHT *CFHFTC *SMPEHI FT+GS N GS*AE*HTQT *R+D+*VQHRKQTFCEPNV*I*T MSLQK FNDC  C*LCN  QYA*L P
Subject   3678  A*H*SHF*GAVPGWRA*YDVLG*SF*GF*YLR*V*YKWGN*GY*PKW*DFRSV*YNQ*AHKAC*EDRQWPSEHKSR*IEKG*AIRP*PSFNEWVQNNLFSKL*AG*KAAGVLARGPNWCHK**KVQ*CKTLAFWNINRGY*AKRANCRAWHVWGWKEFLV*EFHEEV*RKICNLCLPQTSLGKFNQK*S*NG*WLQSC*SRQIKEGRVGCSDF*GFP*KSFWFEGWPLCNFR*GSVVSPWIYRSMFACHT**CFHFTCR*SMPEHIRFTKGSGNSGS*AE*HTQTT*RQDV*VQHRKQTFCEPNV*I*TTMSLQKGFNDCCFC*LCNFSQYA*LSP  4685

Range 4: 3670 to 4683 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
649.0 bits(1410) 0.0 291/338(86%) 0/338(0%) Plus/Minus
Query       45  EEVMHIVEDCIISKGCSH*TFFEVTWQSRFKHWVHKTSAFYVVPICLSFKQSEYVTLLSSQNCSXXXXXXXXXXWITSK*NESITAYDK*TQIDISRGKQLNLIENHTMPSLQTRNFSKENFKGHYIPPFLL*FACFGNFAAIIHFKIIFD*ICQGSSRGNKSNKFSLRSLHETLIQETLSSPKCAKHDS*LSWLYIRS*YTRKPGFCITELFITYNTS*AP*QAPLQLFSPLKVWKIGYFGPIH*KKIKGGSLNLPQLIYFYALRAIADLLNMPYVLIGYIKQGGNLTIWVNDLNFPIYITLSANIKGLKSLSQVHHIKPSPLAQLLKNVVGARPTR  1058
                E+VMHIV++CIISK  SH*T FE TW SRFKHWVHKTSAFYVVPI L+FK  EYVTLLSSQNC ILL*I+CALAWIT K*NESIT YDK T IDISRGKQLNLIEN+TM SLQTRNFSKEN K HYIPPFLL*FACF NFAAIIHFKIIFD*ICQGSS G+K  KFS R LHETLIQETLSSPK AKHDS*LSWL IR *Y+RKP FCITELFITY+TS*AP*QAPLQLFSPLKVWKIGYFGPIH*KK+KGGSLNL Q IYFYALRAIADLLNMPYVLIGYIKQ GNLTIWVN+LNFPIYITLSANIK LKS SQVHHIKPS LAQLLKNV+ AR T+
Subject   3670  EKVMHIVKNCIISKSSSH*TLFEETW*SRFKHWVHKTSAFYVVPIRLAFK*FEYVTLLSSQNCPILL*IVCALAWITGK*NESITTYDKQT*IDISRGKQLNLIENYTMASLQTRNFSKENLKSHYIPPFLL*FACFSNFAAIIHFKIIFD*ICQGSSGGDKGYKFSFRPLHETLIQETLSSPKRAKHDS*LSWLNIRD*YSRKPRFCITELFITYDTS*AP*QAPLQLFSPLKVWKIGYFGPIH*KKVKGGSLNLSQFIYFYALRAIADLLNMPYVLIGYIKQSGNLTIWVNNLNFPIYITLSANIKSLKSFSQVHHIKPSTLAQLLKNVISARLTQ  4683

Range 5: 4064 to 4684 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
403.4 bits(874) 0.0 172/207(83%) 0/207(0%) Plus/Minus
Query       44  GGSHAYCGRLHNQQRLQSLNLF*SDMAV*IQTLGSQNVCFLCCTYMSFLQAV*VCHSAQLPKLLDPSVNHMCSGMDHQQVK*KHHCV*QVNTDRYIQGETTEPHRKSHNAQPSNQKLF*GKLQRSLHPTLPSLICLLWQLCSHHPFQDHF*LNLPRLV*GKQK*QIFPQISS*NSYTRNSFQPQMCQARQLALLALYPQLIYQKARV  664
                G SHAYC +LHNQQ+ QSLN F* DM V*IQTLGSQNVCFLCCTY S LQ V*VCHSAQLP+L DP VN MCSGMDH+QVK*KHH V*Q N DRYIQGETTEPHRK HN QPSNQKLF*GK Q+SLHPTLPSLICLL QLCSHHPFQDHF*LNLPRLV G+Q+ QIF Q SS*NSYTRNSFQPQ CQARQLALLA YP+LI+QKA+V
Subject   4064  GESHAYCEKLHNQQKQQSLNPF*RDMVV*IQTLGSQNVCFLCCTYTSCLQVV*VCHSAQLPELPDPFVNRMCSGMDHRQVK*KHHYV*QANIDRYIQGETTEPHRKLHNGQPSNQKLF*GKPQKSLHPTLPSLICLL*QLCSHHPFQDHF*LNLPRLVWGRQRLQIFLQTSS*NSYTRNSFQPQTCQARQLALLA*YPRLIFQKAKV  4684

Range 6: 3677 to 4024 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
252.2 bits(544) 0.0 104/116(90%) 0/116(0%) Plus/Minus
Query      704  GPLASTLATFQPAQSLENRLFWTHSLKEDQGRIA*PSSTHLFLCSEGHCRSSQHALCAHWLYQTRRKSYHLG**PQFPHLYHT*RKYQRPQKSQPSTSY*ALPPGTAPQKCGWC*A  1051
                GPLAST A FQPAQSLENRLFWTHSLKE QGRIA*P S HL LCSEGHCRSSQHALCAHWLYQT RKSYHLG**PQFPHLYHT*RKYQ+PQK QPSTSY*AL PGTAPQKC  C*A
Subject   3677  GPLASTPAAFQPAQSLENRLFWTHSLKEGQGRIA*PFSIHLLLCSEGHCRSSQHALCAHWLYQTERKSYHLG**PQFPHLYHT*RKYQKPQKLQPSTSY*ALHPGTAPQKCD*C*A  4024

Range 7: 3674 to 4705 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
611.9 bits(1329) 0.0 291/344(85%) 0/344(0%) Minus/Plus
Query       23  VGLAPTTFLRSCARGEGLI*CTWLRLLRPLIFALSVI*MGKLRSLTQMVRFPPCLI*PMST*GMLRRSAMALRA*K*MS*GRLSDPPLIFFQ*MGPK*PIFQTLSGLKSCKGAC*GA*LVL*VMKSSVMQNPGFLVYQLRI*SQES*LSCLAHLGLERVSCIRVS*RDLRENLLLLFPLDEPWQIQSKMILKWMMAAKLPKQANQRRKGGM**PLKFSLEKFLV*RLGIV*FSMRFSCFPLDISICVYLSYAVMLSFHLLVIHARAHMIHRRIEQFWELSRVTYSDCLKERHIGTT*KADVL*TQCLNLDCHVTSKKVQ*LQPLLIMQSSTICMTSSYRPQTHP  1054
                V LA  TFLRSCAR EGLI*CTWL+LLR LIFALSVI*MGKLR LTQMVRFP CLI*PMST*GMLRRSAMALRA*K*M+* RLSDPPL FFQ*MGPK*PIFQTLSGLKSC+GAC*GA*LV *VMKSSVMQN GFL YQ RI SQES*LSCLA LGLERVSCIRVS*R L+ENL  L P DEPWQIQSKMILKWMMAAKL KQANQRRKGGM** L+FSLEKFLV*RL IV*FSMRFSCFPLDISI V LSY VMLSFHL VIHARAH IH+RI QFWELSRVTYS+ LK R IGTT*KADVL*TQCLNLD HV+SK+VQ*L  LLIMQ  TICMT S++ +  P
Subject   3674  VSLALITFLRSCARVEGLI*CTWLKLLRLLIFALSVI*MGKLRLLTQMVRFPLCLI*PMST*GMLRRSAMALRA*K*MN*ERLSDPPLTFFQ*MGPK*PIFQTLSGLKSCRGAC*GA*LVS*VMKSSVMQNLGFLEYQSRILSQES*LSCLARLGLERVSCIRVS*RGLKENL*PLSPPDEPWQIQSKMILKWMMAAKLLKQANQRRKGGM**LLRFSLEKFLV*RLAIV*FSMRFSCFPLDISIYVCLSYVVMLSFHLPVIHARAHTIHKRIGQFWELSRVTYSNYLKARRIGTT*KADVL*TQCLNLDYHVSSKRVQ*LLLLLIMQFFTICMTFSWQGRKVP  4705

Grapevine rupestris stem pitting associated virus isolate GRSPaV WA, complete genome

Sequence ID: KC427107.1 Length: 8742 Number of Matches: 7

Range 1: 3679 to 4704 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
793.3 bits(1725) 0.0 331/342(97%) 0/342(0%) Minus/Plus
Query       24  PSTNHIFEELCQGGGLNMMYLAETFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIKIDELRKVKRSALDLLSMNGSKITYFPNFERAEKLQGCLLGGLTGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLPTPNTP  1049
                PSTNHIFEELCQGGGLNMMYLAE FEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIK+DELRKVKRSALDLLSMNGSKITYFP+FERAEKLQGCLLGGLTGVISDEKFSDAKPWLSGIS ADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDIL+LLEGKTYRYNIESRRFVNPMFESRLPC FKKGSMTAAFADYAIFHNMHDFLL     P
Subject   3679  PSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFSDAKPWLSGISIADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILKLLEGKTYRYNIESRRFVNPMFESRLPCLFKKGSMTAAFADYAIFHNMHDFLLARSKGP  4704

Range 2: 3678 to 4703 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
716.3 bits(1557) 0.0 323/342(94%) 0/342(0%) Plus/Minus
Query       25  GVFGVGRRKSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTKRLLSMLYLYVFPXXXXXXXXXXAPKIARSFCESYVLWHGSPASEMKASLRMTSKHRSIYPGGNN*TSSKITQCPAFKPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLGFISAVDIPESQGFASLNFSSLITPVRPPSKHPCNFSARSKFGK*VILDPFIERRSRADRLTFLNSSIFML*GPLPIFSTCLMCSLVISNKAEILPFGLMTSISPFISHLAQISKASKVSAKYIILSPPPWHSSSKMWLVLG  1050
                G F + RRKSCIL KIA*SAKAAVIEPFLK HGSLDSNIGFTKRLLSMLYL VFPSSSLSMSLCSAP+IARSFCESYVLWHGSPASEMKASLRMTSKHRSIYPGGNN*TSSKITQ PAFKPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLG ISA+DIPESQGFASLNFSSL+TPVRPPSKHPC+FSARSK GK*VILDPFIERRSRADRLTFLNSS FML*GPLPIFSTCLMCSLVISNKAEILPFGL+TSISPF+SHLAQISKASK SAKYIILSPPPWHSSSKM LVLG
Subject   3678  GPFDLARRKSCIL*KIA*SAKAAVIEPFLKRHGSLDSNIGFTKRLLSMLYL*VFPSSSLSMSLCSAPRIARSFCESYVLWHGSPASEMKASLRMTSKHRSIYPGGNN*TSSKITQWPAFKPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLGLISAIDIPESQGFASLNFSSLMTPVRPPSKHPCSFSARSKLGK*VILDPFIERRSRADRLTFLNSSTFML*GPLPIFSTCLMCSLVISNKAEILPFGLITSISPFMSHLAQISKASKASAKYIILSPPPWHSSSKM*LVLG  4703

Range 3: 3678 to 4685 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
667.3 bits(1450) 0.0 287/336(85%) 0/336(0%) Minus/Plus
Query       43  A*HQPHF*GAVPGGRA*YDVLG*DF*GL*YLR*V*YKWGN*GH*PKW*DFRLV*YNQ*AHKAC*EDRQWPSEHKNR*VEEG*AIRP*SSFNEWVQNNLFSKL*AG*KVARVLARGPNWCYK**KVQ*CKTLAFWYINCGYKAKRANCRAWHIWGWKEFLV*EFHEEI*GKICYFCFP*TSLGKFNQK*S*NG*WLQSCQSRQIKEGRVGCSDL*SFP*KSFWFEGWALCDFR*GSVVSPWIYRSVFTCHTQ*CFHFTCW*SMPEHI*FTEGSSNFGS*AE*HTQTA*RKDI*VQHRKQTFCEPNV*I*TAMSLQKRFNDCSLC*LCNLPQYA*LPP  1050
                A*H  HF*GAVPG RA*YDVLG* F*G *YLR*V*+KWGN*G+*PKW*DFR V*YNQ*AHKAC*EDRQWPSEHK+R*+E+G*AIRP* SF+EWVQNNLFSKL*AG*K A VLARGPNWC+K**KVQ*CKTLAFW IN GY AKRANCRAWH+WGWKEFLV*EFHEE+* KIC  C P TSLGKFNQK*S*NG*WLQSC SRQIKEGRVGCSD * FP*KSFWFEGW LCDFR*GSVVSPWIYRS+F CHT *CFHFTC * MPEHI FT+GS N GS*AE*HTQTA*R+D+ VQHRKQTFCEPNV*I*T MSLQK FNDC  C*LCN  QYA*L P
Subject   3678  A*H*SHF*GAVPGWRA*YDVLG*SF*GF*YLR*V*HKWGN*GY*PKW*DFRFV*YNQ*AHKAC*EDRQWPSEHKSR*IEKG*AIRP*PSFDEWVQNNLFSKL*AG*KAAGVLARGPNWCHK**KVQ*CKTLAFWNINRGY*AKRANCRAWHVWGWKEFLV*EFHEEV*RKICNLCLPQTSLGKFNQK*S*NG*WLQSC*SRQIKEGRVGCSDF*GFP*KSFWFEGWPLCDFR*GSVVSPWIYRSMFACHT**CFHFTCR*PMPEHIRFTKGSGNSGS*AE*HTQTA*REDLQVQHRKQTFCEPNV*I*TTMSLQKGFNDCCFC*LCNFSQYA*LSP  4685

Range 4: 3670 to 4683 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
654.9 bits(1423) 0.0 289/338(86%) 0/338(0%) Plus/Minus
Query       45  EEVMHIVEDCIISKGCSH*TFFEVTWQSRFKHWVHKTSAFYVVPICLSFKQSEYVTLLSSQNCSXXXXXXXXXXWITSK*NESITAYDK*TQIDISRGKQLNLIENHTMPSLQTRNFSKENFKGHYIPPFLL*FACFGNFAAIIHFKIIFD*ICQGSSRGNKSNKFSLRSLHETLIQETLSSPKCAKHDS*LSWLYIRS*YTRKPGFCITELFITYNTS*AP*QAPLQLFSPLKVWKIGYFGPIH*KKIKGGSLNLPQLIYFYALRAIADLLNMPYVLIGYIKQGGNLTIWVNDLNFPIYITLSANIKGLKSLSQVHHIKPSPLAQLLKNVVGARPTR  1058
                E+VMHIV++CIISK  SH*T FE TW SRFKHWVHKTSAFYVVP+ L FKQ EYVTLLSSQNC ILL*I+CALAW+T K*NESIT YDK T IDISRGKQLNLIENHTM SLQTRNFSKEN K HYIPPFLL*FACF NFAAIIHFKIIFD*ICQGSS G+K  KFS R LHETLIQETLSSPK AKHDS*LSWL IR *Y+RKP FCITELFITY+TS*AP*QAPLQLFSPLK WKIGYFGPIH KK+KGGSLNL Q IYFYALRAIADLLNMPYVLIGYIKQ GNLTIWVN+LNFPIY+TLSANIK LKS SQVHHIKPS LAQLLKNV+ ARPT+
Subject   3670  EKVMHIVKNCIISKSSSH*TLFEETW*SRFKHWVHKTSAFYVVPVSLPFKQFEYVTLLSSQNCPILL*IVCALAWVTGK*NESITTYDKQT*IDISRGKQLNLIENHTMASLQTRNFSKENLKSHYIPPFLL*FACFSNFAAIIHFKIIFD*ICQGSSGGDKGYKFSFRPLHETLIQETLSSPKRAKHDS*LSWLNIRD*YSRKPRFCITELFITYDTS*AP*QAPLQLFSPLKAWKIGYFGPIHRKKVKGGSLNLSQFIYFYALRAIADLLNMPYVLIGYIKQSGNLTIWVNNLNFPIYVTLSANIKSLKSFSQVHHIKPSTLAQLLKNVISARPTQ  4683

Range 5: 4064 to 4684 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
400.6 bits(868) 0.0 172/207(83%) 0/207(0%) Plus/Minus
Query       44  GGSHAYCGRLHNQQRLQSLNLF*SDMAV*IQTLGSQNVCFLCCTYMSFLQAV*VCHSAQLPKLLDPSVNHMCSGMDHQQVK*KHHCV*QVNTDRYIQGETTEPHRKSHNAQPSNQKLF*GKLQRSLHPTLPSLICLLWQLCSHHPFQDHF*LNLPRLV*GKQK*QIFPQISS*NSYTRNSFQPQMCQARQLALLALYPQLIYQKARV  664
                G SHAYC +LHNQQ+ QSLN F* DM V*IQTLGSQNVCFLCCT  S LQAV*VCHSAQLP+L DP VN MCSGM H+QVK*KHH V*Q N DRYIQGETTEPHRKSHN QPSNQKLF*GK Q+SLHPTLPSLICLL QLCSHHPFQDHF*LNLPRLV G+Q+ QIF Q SS*NSYTRNSFQPQ CQARQLALLA YP+LI+QKA+V
Subject   4064  GESHAYCEKLHNQQKQQSLNPF*RDMVV*IQTLGSQNVCFLCCTCKSSLQAV*VCHSAQLPELPDPFVNRMCSGMGHRQVK*KHHYV*QANIDRYIQGETTEPHRKSHNGQPSNQKLF*GKPQKSLHPTLPSLICLL*QLCSHHPFQDHF*LNLPRLVWGRQRLQIFLQTSS*NSYTRNSFQPQTCQARQLALLA*YPRLIFQKAKV  4684

Range 6: 3677 to 4024 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
246.2 bits(531) 0.0 102/116(88%) 0/116(0%) Plus/Minus
Query      704  GPLASTLATFQPAQSLENRLFWTHSLKEDQGRIA*PSSTHLFLCSEGHCRSSQHALCAHWLYQTRRKSYHLG**PQFPHLYHT*RKYQRPQKSQPSTSY*ALPPGTAPQKCGWC*A  1051
                GPLAST A FQPAQSLENRLFWTHS KE QGRIA*P S HL LCSEGHCRSSQHALCAHWLYQT+RKSYHLG**PQFPHL HT*RKYQ+PQK QPSTSY*AL PGTAPQKC  C*A
Subject   3677  GPLASTPAAFQPAQSLENRLFWTHSSKEGQGRIA*PFSIHLLLCSEGHCRSSQHALCAHWLYQTKRKSYHLG**PQFPHLCHT*RKYQKPQKLQPSTSY*ALHPGTAPQKCD*C*A  4024

Range 7: 3674 to 4705 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
606.8 bits(1318) 0.0 288/344(84%) 0/344(0%) Minus/Plus
Query       23  VGLAPTTFLRSCARGEGLI*CTWLRLLRPLIFALSVI*MGKLRSLTQMVRFPPCLI*PMST*GMLRRSAMALRA*K*MS*GRLSDPPLIFFQ*MGPK*PIFQTLSGLKSCKGAC*GA*LVL*VMKSSVMQNPGFLVYQLRI*SQES*LSCLAHLGLERVSCIRVS*RDLRENLLLLFPLDEPWQIQSKMILKWMMAAKLPKQANQRRKGGM**PLKFSLEKFLV*RLGIV*FSMRFSCFPLDISICVYLSYAVMLSFHLLVIHARAHMIHRRIEQFWELSRVTYSDCLKERHIGTT*KADVL*TQCLNLDCHVTSKKVQ*LQPLLIMQSSTICMTSSYRPQTHP  1054
                VGLA  TFLRSCAR EGLI*CTWL+LLR LIFALSV *MGKLR LTQMVRFP CLI*PMST*GMLRRSAMALRA*K*M+* RLSDPPL FF+*MGPK*PIFQ LSGLKSC+GAC*GA*LV *VMKSSVMQN GFL YQ RI SQES*LSCLA LGLERVSCIRVS*R L+ENL  L P DEPWQIQSKMILKWMMAAKL KQANQRRKGGM** L+FSLEKFLV*RL IV*FSMRFSCFPLDISI V LSY VMLSFHL V HARAH IH+RI QFWELSRVTYS+CLK R  GTT*KADVL*TQCLNLD HV+SK+VQ*L  LLIMQ  TICMT S++ +  P
Subject   3674  VGLALITFLRSCARVEGLI*CTWLKLLRLLIFALSVT*MGKLRLLTQMVRFPLCLI*PMST*GMLRRSAMALRA*K*MN*ERLSDPPLTFFR*MGPK*PIFQALSGLKSCRGAC*GA*LVS*VMKSSVMQNLGFLEYQSRILSQES*LSCLARLGLERVSCIRVS*RGLKENL*PLSPPDEPWQIQSKMILKWMMAAKLLKQANQRRKGGM**LLRFSLEKFLV*RLAIV*FSMRFSCFPLDISIYVCLSYVVMLSFHLPVTHARAHTIHKRIGQFWELSRVTYSNCLKGRLTGTT*KADVL*TQCLNLDYHVSSKRVQ*LLLLLIMQFFTICMTFSWQGRKVP  4705

Nucleotide Sequence (546 letters)

Query ID:ds2016-58_48
Query definition:No definition line
Query length:589
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 13 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
55
110
165
220
275
330
385
440
495
546

Descriptions

Alignments

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OE8

Sequence ID: AB277784.1 Length: 2876 Number of Matches: 8

Range 1: 503 to 1024 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
415.7 bits(901) 0.0 173/174(99%) 0/174(0%) Minus/Plus
Query       24  KVQFVSNPTFCGWCLFKEGTFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGR  545
                KVQFVSNPTFCGWCLFKEG FKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGR
Subject    503  KVQFVSNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGR  1024

Range 2: 504 to 1025 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
382.8 bits(829) 0.0 161/174(93%) 0/174(0%) Plus/Minus
Query       23  SSP*D*DCLEHLQ*KPQNSRPLRLTPLLNYSYHYQAHYV*QLET*AH*KHL*TRRLIML*LNYS*YSNNAKYLRPNQPLQTGLKLNTSFYACS*PGTSHNCSVPPPPLLSSFQLIAHPIYMHRTPLSHNCQYSSPNCPSLWLCIFAPKLVEVS*RFPP*TSTIHRMWG*KQTEP  544
                +S * *DCLEH  *KP+NSRPLRLTPLLNYSYHYQAHYV*QLE * H*KHL*TRRLIML*LNYS*YSNNAKYLRPNQPLQTGLKL+TS YACS*PGTSHNCSVPPPPLLSSFQLIAHPIYMHRTPLSHNCQY+SP+CPSLWLCIFAPKLVEVS* FPP*TSTIHRMWG*KQTEP
Subject    504  TSL*G*DCLEHPL*KPRNSRPLRLTPLLNYSYHYQAHYV*QLEI*VH*KHL*TRRLIML*LNYS*YSNNAKYLRPNQPLQTGLKLSTSSYACS*PGTSHNCSVPPPPLLSSFQLIAHPIYMHRTPLSHNCQYNSPDCPSLWLCIFAPKLVEVS*IFPP*TSTIHRMWG*KQTEP  1025

Range 3: 502 to 1023 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
344.7 bits(746) 0.0 163/174(94%) 0/174(0%) Minus/Plus
Query       25  QGSVCF*PHILWMVLV*GGNLQETSTNLGANMHSQRDGQFGELY*QLCDRGVLCI*IG*AIXXXXXXXXXXGTLQLCEVPG*EQA*NEVFNFRPV*SG*LGLKYLALFEYYE*FS*SIISLRVYRCFQCAQVSSCYT*CAW*W*E*FNKGVNLRGREFCGFHCRCSRQS*SHGE  546
                QGSVCF*PHILWMVLV*GGN+QETSTNLGANMHSQRDGQ GELY*QLCDRGVLCI*IG*AIN*NDDRRGGGGTLQLCEVPG*EQA*+EV NFRPV*SG*LGLKYLALFEYYE*FS*SIISLRVYRCFQC Q+SSCYT*CAW*W*E*FNKGVNLRGREF GFH  CSRQS* H E
Subject    502  QGSVCF*PHILWMVLV*GGNIQETSTNLGANMHSQRDGQSGELY*QLCDRGVLCI*IG*AIN*NDDRRGGGGTLQLCEVPG*EQA*DEVLNFRPV*SG*LGLKYLALFEYYE*FS*SIISLRVYRCFQCTQISSCYT*CAW*W*E*FNKGVNLRGREFRGFHSGCSRQS*PHRE  1023

Range 4: 503 to 1024 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
320.4 bits(693) 0.0 163/174(94%) 0/174(0%) Plus/Minus
Query       24  PPREIRTVWNTCSESHKTLVL*D*LPYXXXXXXXXXXMYNNWKLEHTENTYKLEG**CFN*IIHNTRTTPNT*GLINHFKQA*N*TPHFMLVPNQEPHTIXXXXXXXXXXXXN**LTQSICIGHLYRIIVNTVLQIAHLSGYAYSLPN*LRFLEGSLLKQAPSTECGVRNKLNL  545
                PP E+RTVWNT  ESH+TLVL*D*LPY*TTLTTTRHTMYNNWK E+TENTYKLEG**CFN*IIHNTRTTPNT*GLINHFKQA*N* PH MLVPNQEPHTIVVCLHLLFCHHFN**LTQSICIGHLYRIIVNT+LQIAHLSGYAYSLPN*LRFLE SLLKQAPSTECGVRNKLNL
Subject    503  PPCEVRTVWNTRCESHETLVL*D*LPY*TTLTTTRHTMYNNWKFEYTENTYKLEG**CFN*IIHNTRTTPNT*GLINHFKQA*N*APHLMLVPNQEPHTIVVCLHLLFCHHFN**LTQSICIGHLYRIIVNTILQIAHLSGYAYSLPN*LRFLEYSLLKQAPSTECGVRNKLNL  1024

Range 5: 504 to 863 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
273.7 bits(591) 0.0 116/120(97%) 0/120(0%) Minus/Plus
Query      185  RFSLFLTPHSVDGACLRREPSRNLN*FGSEYA*PERWAIWRTVLTIMR*RCPMHIDWVSYQLK**QKRRWRHTTIV*GSWLGTSIK*GVQFQACLKWLIRP*VFGVVRVL*II*LKHYQP  544
                RFSLFLTPHSVDGACLRRE SRNLN*FGSEYA*PERWAIWR VLTIMR*RCPMHIDWVSYQLK**QKRRWRHTTIV*GSWLGTSI+*G QFQACLKWLIRP*VFGVVRVL*II*LKHYQP
Subject    504  RFSLFLTPHSVDGACLRREYSRNLN*FGSEYA*PERWAIWRIVLTIMR*RCPMHIDWVSYQLK**QKRRWRHTTIV*GSWLGTSIR*GAQFQACLKWLIRP*VFGVVRVL*II*LKHYQP  863

Range 6: 909 to 1034 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.1 bits(114) 0.0 34/42(81%) 0/42(0%) Minus/Plus
Query       14  YIVCLXXXXXXX*GS*SQRTRVLWLSLQVFQTVLISRGGPNT  139
                YIVCLVVVRVV**GS*SQRTRV WLS +VFQTVL S+GG ++
Subject    909  YIVCLVVVRVV**GS*SQRTRVSWLSQRVFQTVLTSQGGTSS  1034

Range 7: 502 to 897 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
254.5 bits(549) 0.0 129/132(98%) 0/132(0%) Plus/Minus
Query      151  NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEIEHLILCLFLTRNLTQL*CAXXXXXXXXXXXXXPNLYA*DTSIA*LSIQFSKLPISLAMHIRSQIS*GFLKVPSLNKHHPQNVGLETN*TL  546
                NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEIEHLILCLFLTRNLTQL*CASTSSSVIISIDSSPNLYA*DTSIA*LSIQFS+LPISLAMHIRSQIS*GFL +PSLNKHHPQNVGLETN*TL
Subject    502  NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEIEHLILCLFLTRNLTQL*CASTSSSVIISIDSSPNLYA*DTSIA*LSIQFSRLPISLAMHIRSQIS*GFLNIPSLNKHHPQNVGLETN*TL  897

Range 8: 949 to 1029 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.4 bits(119) 0.0 25/27(93%) 0/27(0%) Plus/Minus
Query       19  LVLPVRLGLSGTPAVKATKLSSSEINS  99
                + LPVRLGLSGTPAVKATKLSSSEINS
Subject    949  MYLPVRLGLSGTPAVKATKLSSSEINS  1029

Grapevine rupestris stem pitting associated virus complete genome, genomic RNA, isolate GRSPaV MG

Sequence ID: FR691076.1 Length: 8749 Number of Matches: 8

Range 1: 6247 to 6768 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
412.5 bits(894) 0.0 171/174(98%) 0/174(0%) Minus/Plus
Query       24  KVQFVSNPTFCGWCLFKEGTFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGR  545
                KVQFVSNPTFCGWCLFKEG FKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRC ISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFP+VIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGR
Subject   6247  KVQFVSNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCLISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPIVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGR  6768

Range 2: 6248 to 6769 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
391.5 bits(848) 0.0 165/174(95%) 0/174(0%) Plus/Minus
Query       23  SSP*D*DCLEHLQ*KPQNSRPLRLTPLLNYSYHYQAHYV*QLET*AH*KHL*TRRLIML*LNYS*YSNNAKYLRPNQPLQTGLKLNTSFYACS*PGTSHNCSVPPPPLLSSFQLIAHPIYMHRTPLSHNCQYSSPNCPSLWLCIFAPKLVEVS*RFPP*TSTIHRMWG*KQTEP  544
                +S * *DCLEHL *KP+NSRPLRLTPLLNYSYHYQAHYV*QLE *AH*KHL*TRRLIML*LNYS*YSNNAKYLRPNQPLQTGLKL+TS YACS*PGTSHNCSVPPPPLLSS QLIAHPIYMHRTPLSHNCQYSSPNCPSLWLCIFAPKLVEVS*RFPP*TSTIHRMWG*KQTEP
Subject   6248  TSL*G*DCLEHLL*KPRNSRPLRLTPLLNYSYHYQAHYV*QLEI*AH*KHL*TRRLIML*LNYS*YSNNAKYLRPNQPLQTGLKLDTSSYACS*PGTSHNCSVPPPPLLSSSQLIAHPIYMHRTPLSHNCQYSSPNCPSLWLCIFAPKLVEVS*RFPP*TSTIHRMWG*KQTEP  6769

Range 3: 6246 to 6767 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
345.6 bits(748) 0.0 163/174(94%) 0/174(0%) Minus/Plus
Query       25  QGSVCF*PHILWMVLV*GGNLQETSTNLGANMHSQRDGQFGELY*QLCDRGVLCI*IG*AIXXXXXXXXXXGTLQLCEVPG*EQA*NEVFNFRPV*SG*LGLKYLALFEYYE*FS*SIISLRVYRCFQCAQVSSCYT*CAW*W*E*FNKGVNLRGREFCGFHCRCSRQS*SHGE  546
                QGSVCF*PHILWMVLV GGNLQETSTNLGANMHSQRDGQFGELY*QLCDRGVLCI*IG*AIN*+DDRRGGGGTLQLCEVPG*EQA*+EV NFRPV*SG*LGLKYLALFEYYE*FS*SIISLRVYRCFQCA +S+CYT*CAW*W*E*FNKGVNLRGREF GFH RCSRQS* H E
Subject   6246  QGSVCF*PHILWMVLVQGGNLQETSTNLGANMHSQRDGQFGELY*QLCDRGVLCI*IG*AIN*DDDRRGGGGTLQLCEVPG*EQA*DEVSNFRPV*SG*LGLKYLALFEYYE*FS*SIISLRVYRCFQCA*ISNCYT*CAW*W*E*FNKGVNLRGREFRGFHSRCSRQS*PHRE  6767

Range 4: 6247 to 6768 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
328.7 bits(711) 0.0 164/174(94%) 0/174(0%) Plus/Minus
Query       24  PPREIRTVWNTCSESHKTLVL*D*LPYXXXXXXXXXXMYNNWKLEHTENTYKLEG**CFN*IIHNTRTTPNT*GLINHFKQA*N*TPHFMLVPNQEPHTIXXXXXXXXXXXXN**LTQSICIGHLYRIIVNTVLQIAHLSGYAYSLPN*LRFLEGSLLKQAPSTECGVRNKLNL  545
                PP E+RTVWNTC ESH+TLVL*D*LPY*TTLTTTRHTMYNNWK +HTENTYKLEG**CFN*IIHNTRTTPNT*GLINHFKQA*N*TPH MLVPNQEPHTIVVCLHLLFCHH N**LTQSICIGHLYRIIVNTVLQIAHLSGYAYSLPN*LRFLE SLL+QAPSTECGVRNKLNL
Subject   6247  PPCEVRTVWNTCCESHETLVL*D*LPY*TTLTTTRHTMYNNWKFKHTENTYKLEG**CFN*IIHNTRTTPNT*GLINHFKQA*N*TPHLMLVPNQEPHTIVVCLHLLFCHHLN**LTQSICIGHLYRIIVNTVLQIAHLSGYAYSLPN*LRFLEDSLLEQAPSTECGVRNKLNL  6768

Range 5: 6248 to 6607 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
271.0 bits(585) 0.0 115/120(96%) 0/120(0%) Minus/Plus
Query      185  RFSLFLTPHSVDGACLRREPSRNLN*FGSEYA*PERWAIWRTVLTIMR*RCPMHIDWVSYQLK**QKRRWRHTTIV*GSWLGTSIK*GVQFQACLKWLIRP*VFGVVRVL*II*LKHYQP  544
                RFSLFLTPHSVDGAC RRE SRNLN*FGSEYA*PERWAIWRTVLTIMR*RCPMHIDWVSYQL+**QKRRWRHTTIV*GSWLGTSI+*GV FQACLKWLIRP*VFGVVRVL*II*LKHYQP
Subject   6248  RFSLFLTPHSVDGACSRRESSRNLN*FGSEYA*PERWAIWRTVLTIMR*RCPMHIDWVSYQLR**QKRRWRHTTIV*GSWLGTSIR*GV*FQACLKWLIRP*VFGVVRVL*II*LKHYQP  6607

Range 6: 6653 to 6778 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.0 bits(118) 0.0 35/42(83%) 0/42(0%) Minus/Plus
Query       14  YIVCLXXXXXXX*GS*SQRTRVLWLSLQVFQTVLISRGGPNT  139
                YIVCLVVVRVV**GS*SQRTRV WLS QVFQTVL S+GG ++
Subject   6653  YIVCLVVVRVV**GS*SQRTRVSWLSQQVFQTVLTSQGGTSS  6778

Range 7: 6246 to 6641 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
255.8 bits(552) 0.0 130/132(98%) 0/132(0%) Plus/Minus
Query      151  NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEIEHLILCLFLTRNLTQL*CAXXXXXXXXXXXXXPNLYA*DTSIA*LSIQFSKLPISLAMHIRSQIS*GFLKVPSLNKHHPQNVGLETN*TL  546
                NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEI HLILCLFLTRNLTQL*CASTSSSVIISIDSSPNLYA*DTSIA*LSIQFSKLPISLAMHIRSQIS*GFLK+PSLNKHHPQNVGLETN*TL
Subject   6246  NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEIRHLILCLFLTRNLTQL*CASTSSSVIISIDSSPNLYA*DTSIA*LSIQFSKLPISLAMHIRSQIS*GFLKIPSLNKHHPQNVGLETN*TL  6641

Range 8: 6693 to 6773 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.4 bits(119) 0.0 25/27(93%) 0/27(0%) Plus/Minus
Query       19  LVLPVRLGLSGTPAVKATKLSSSEINS  99
                + LPVRLGLSGTPAVKATKLSSSEINS
Subject   6693  MYLPVRLGLSGTPAVKATKLSSSEINS  6773

Grapevine rupestris stem pitting associated virus isolate SK704 C, complete genome

Sequence ID: KX274276.1 Length: 8726 Number of Matches: 8

Range 1: 6248 to 6769 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
412.5 bits(894) 0.0 171/174(98%) 0/174(0%) Minus/Plus
Query       24  KVQFVSNPTFCGWCLFKEGTFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGR  545
                KVQFVSNPTFCGWCLFKEG FKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFE VD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDE+FVAFTAGVPDSPNLTGR
Subject   6248  KVQFVSNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFVAFTAGVPDSPNLTGR  6769

Range 2: 6249 to 6761 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
357.1 bits(773) 0.0 152/171(89%) 0/171(0%) Plus/Minus
Query       32  *D*DCLEHLQ*KPQNSRPLRLTPLLNYSYHYQAHYV*QLET*AH*KHL*TRRLIML*LNYS*YSNNAKYLRPNQPLQTGLKLNTSFYACS*PGTSHNCSVPPPPLLSSFQLIAHPIYMHRTPLSHNCQYSSPNCPSLWLCIFAPKLVEVS*RFPP*TSTIHRMWG*KQTEP  544
                *D*DCLEHL *KP+NSRPLRLTPLLNYSYH QAHYV*QLE *AH*KHL*T++LIML*LNYS*YSNNAKYLRPNQ LQ GLKL+TSFYACS  GTSHNCSVPPP  LSSFQ IAHPI MHRTPLSHNCQYSSPNCP LWLCIF+P+LVEVS*RFPP* STIHRMWG*KQTEP
Subject   6249  *D*DCLEHLP*KPRNSRPLRLTPLLNYSYHCQAHYV*QLEI*AH*KHL*TQKLIML*LNYS*YSNNAKYLRPNQLLQIGLKLSTSFYACSSLGTSHNCSVPPPLPLSSFQWIAHPICMHRTPLSHNCQYSSPNCPFLWLCIFSPRLVEVS*RFPP*ISTIHRMWG*KQTEP  6761

Range 3: 6247 to 6762 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
330.5 bits(715) 0.0 153/172(89%) 0/172(0%) Minus/Plus
Query       31  QGSVCF*PHILWMVLV*GGNLQETSTNLGANMHSQRDGQFGELY*QLCDRGVLCI*IG*AIXXXXXXXXXXGTLQLCEVPG*EQA*NEVFNFRPV*SG*LGLKYLALFEYYE*FS*SIISLRVYRCFQCAQVSSCYT*CAW*W*E*FNKGVNLRGREFCGFHCRCSRQS*SH  546
                QGSVCF*PHILWMVL+ GGNLQETSTNLG NMHSQR+GQFGELY*QLCDRGVLCI IG*AI+*NDDR  GGGTLQLCEVP  EQA*NEV NFRP+*S *LGLKYLALFEYYE*FS*SIIS  VYRCFQCAQ+SSCYT*CAW W*E*FNKGVNLRGREF GFH RCSRQS*SH
Subject   6247  QGSVCF*PHILWMVLIQGGNLQETSTNLGENMHSQRNGQFGELY*QLCDRGVLCIQIG*AIH*NDDRGRGGGTLQLCEVPSEEQA*NEVLNFRPI*SS*LGLKYLALFEYYE*FS*SIISF*VYRCFQCAQISSCYT*CAWQW*E*FNKGVNLRGREFRGFHGRCSRQS*SH  6762

Range 4: 6248 to 6769 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
293.9 bits(635) 0.0 151/174(87%) 0/174(0%) Plus/Minus
Query       24  PPREIRTVWNTCSESHKTLVL*D*LPYXXXXXXXXXXMYNNWKLEHTENTYKLEG**CFN*IIHNTRTTPNT*GLINHFKQA*N*TPHFMLVPNQEPHTIXXXXXXXXXXXXN**LTQSICIGHLYRIIVNTVLQIAHLSGYAYSLPN*LRFLEGSLLKQAPSTECGVRNKLNL  545
                P  EIRTVWNTC ESH+ LVL*D*LPY*TTLTT RHTMYNNWK EHTENTYKL+ **CFN*IIHNTRTTPNT*GLIN FK A*N* PHFMLVP+ EPHTIVVCLHL  CHHFN *LTQS+CIGHLYRIIVNTVLQIAH SGYAYSLP+*LRFLE SLL+ APSTECGVRNKLNL
Subject   6248  PSCEIRTVWNTCRESHEILVL*D*LPY*TTLTTARHTMYNNWKFEHTENTYKLKS**CFN*IIHNTRTTPNT*GLINCFK*A*N*APHFMLVPH*EPHTIVVCLHLFLCHHFNG*LTQSVCIGHLYRIIVNTVLQIAHFSGYAYSLPD*LRFLEDSLLE*APSTECGVRNKLNL  6769

Range 5: 6247 to 6642 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
252.6 bits(545) 0.0 128/132(97%) 0/132(0%) Plus/Minus
Query      151  NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEIEHLILCLFLTRNLTQL*CAXXXXXXXXXXXXXPNLYA*DTSIA*LSIQFSKLPISLAMHIRSQIS*GFLKVPSLNKHHPQNVGLETN*TL  546
                NLSTLKTPINSKADNALTKLFIILEQRQILKA*ST SNRPEIEHLILCLFLTRNLTQL*CASTSSSVIIS+DSSPNLYA*DTSIA*LSIQFSKLPISLAMHI SQIS*GFLK+PSLNKHHPQNVGLETN*TL
Subject   6247  NLSTLKTPINSKADNALTKLFIILEQRQILKA*STASNRPEIEHLILCLFLTRNLTQL*CASTSSSVIISMDSSPNLYA*DTSIA*LSIQFSKLPISLAMHILSQIS*GFLKIPSLNKHHPQNVGLETN*TL  6642

Range 6: 6694 to 6774 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.6 bits(115) 0.0 24/27(89%) 0/27(0%) Plus/Minus
Query       19  LVLPVRLGLSGTPAVKATKLSSSEINS  99
                + LPVRLGLSGTPAVKATK SSSEINS
Subject   6694  MYLPVRLGLSGTPAVKATKFSSSEINS  6774

Range 7: 6249 to 6605 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
231.1 bits(498) 0.0 104/119(87%) 0/119(0%) Minus/Plus
Query      188  RFSLFLTPHSVDGACLRREPSRNLN*FGSEYA*PERWAIWRTVLTIMR*RCPMHIDWVSYQLK**QKRRWRHTTIV*GSWLGTSIK*GVQFQACLKWLIRP*VFGVVRVL*II*LKHYQ  544
                RFSLFLTPHSVDGA  RRE SRNLN* G EYA*PE+WAIWRTVLTIMR*RCPMH DWVSY LK**Q++RWRHTTIV*GS  GTSIK*G QFQA LK LIRP*VFGVVRVL*II*LKHYQ
Subject   6249  RFSLFLTPHSVDGAYSRRESSRNLN*SGREYA*PEKWAIWRTVLTIMR*RCPMHTDWVSYPLK**QRKRWRHTTIV*GS**GTSIK*GAQFQAYLKQLIRP*VFGVVRVL*II*LKHYQ  6605

Range 8: 6654 to 6770 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.7 bits(113) 0.0 33/39(85%) 0/39(0%) Minus/Plus
Query       23  YIVCLXXXXXXX*GS*SQRTRVLWLSLQVFQTVLISRGG  139
                YIVCL VVRVV**GS*SQRTR+ WLS QVFQTVLIS+ G
Subject   6654  YIVCLAVVRVV**GS*SQRTRISWLSRQVFQTVLISQEG  6770

Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome

Sequence ID: JX559646.1 Length: 8726 Number of Matches: 8

Range 1: 6247 to 6768 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
407.0 bits(882) 0.0 169/174(97%) 0/174(0%) Minus/Plus
Query       24  KVQFVSNPTFCGWCLFKEGTFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGR  545
                KVQFVSNPTFCGWCLFKEG FKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFE VD*ALSIW C SIMNNLVKALS FEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGR
Subject   6247  KVQFVSNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAVD*ALSIWHCLSIMNNLVKALSTFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGR  6768

Range 2: 6248 to 6754 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
339.2 bits(734) 0.0 147/169(87%) 0/169(0%) Plus/Minus
Query       38  *DCLEHLQ*KPQNSRPLRLTPLLNYSYHYQAHYV*QLET*AH*KHL*TRRLIML*LNYS*YSNNAKYLRPNQPLQTGLKLNTSFYACS*PGTSHNCSVPPPPLLSSFQLIAHPIYMHRTPLSHNCQYSSPNCPSLWLCIFAPKLVEVS*RFPP*TSTIHRMWG*KQTEP  544
                *D LEHL *KP+NSRPLRLTPLLNYSYH Q HYV*+LE *AH*KHL* RRL ML* NYS*YSNNAKYLRPNQPLQ GLKL+TS YACS* GTSHNCSVPPPP LSSF+ IAHPIYMHRTPLSHN Q SS +CPSLWLCIFAPKLVEVS*RFPP* STIHRMWG*KQTEP
Subject   6248  *DYLEHLL*KPRNSRPLRLTPLLNYSYHCQVHYV*RLEI*AH*KHL*IRRLTML*PNYS*YSNNAKYLRPNQPLQIGLKLSTSSYACS*LGTSHNCSVPPPPPLSSFRWIAHPIYMHRTPLSHNYQCSSLDCPSLWLCIFAPKLVEVS*RFPP*ISTIHRMWG*KQTEP  6754

Range 3: 6246 to 6761 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
314.9 bits(681) 0.0 147/172(85%) 0/172(0%) Minus/Plus
Query       31  QGSVCF*PHILWMVLV*GGNLQETSTNLGANMHSQRDGQFGELY*QLCDRGVLCI*IG*AIXXXXXXXXXXGTLQLCEVPG*EQA*NEVFNFRPV*SG*LGLKYLALFEYYE*FS*SIISLRVYRCFQCAQVSSCYT*CAW*W*E*FNKGVNLRGREFCGFHCRCSRQS*SH  546
                QGSVCF*PHILWMVL+*GGNLQETSTNLGANMHSQRDGQ  EL+* LCDRGVLCI*IG*AI+ NDDR GGGGTLQLCEVP *EQA*+EV NFRP+*SG*LGLKYLALFEYYE*F *SI++LR+YRCFQCA +SS YT*C W W*E*FNKGVNLRGREF GFH RCSR S* H
Subject   6246  QGSVCF*PHILWMVLI*GGNLQETSTNLGANMHSQRDGQSRELH**LCDRGVLCI*IG*AIHRNDDRGGGGGTLQLCEVPS*EQA*DEVLNFRPI*SG*LGLKYLALFEYYE*FG*SIVNLRIYRCFQCA*ISSRYT*CTWQW*E*FNKGVNLRGREFRGFHSRCSR*S*PH  6761

Range 4: 6247 to 6768 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
283.3 bits(612) 0.0 145/174(83%) 0/174(0%) Plus/Minus
Query       24  PPREIRTVWNTCSESHKTLVL*D*LPYXXXXXXXXXXMYNNWKLEHTENTYKLEG**CFN*IIHNTRTTPNT*GLINHFKQA*N*TPHFMLVPNQEPHTIXXXXXXXXXXXXN**LTQSICIGHLYRIIVNTVLQIAHLSGYAYSLPN*LRFLEGSLLKQAPSTECGVRNKLNL  545
                P  E+RT+WNTC ESH+TLVL*D*LPY*TTLTT R+TMYN+WK +HTENTYK EG* CFN IIHNT+T PNT*GLIN FK A*N* PH MLVPN EPHTIVVCLHLL CHHF+ *LTQSICIGHLYRII+N VL IAHLSGYAYSLPN*LRFLE SLLK APSTECGVRNKLNL
Subject   6247  PSCEVRTIWNTCCESHETLVL*D*LPY*TTLTTARYTMYNDWKFKHTENTYKFEG*QCFNQIIHNTQTMPNT*GLINRFK*A*N*APHLMLVPN*EPHTIVVCLHLLLCHHFDG*LTQSICIGHLYRIIINAVL*IAHLSGYAYSLPN*LRFLEDSLLK*APSTECGVRNKLNL  6768

Range 5: 6246 to 6641 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
245.8 bits(530) 0.0 124/132(94%) 0/132(0%) Plus/Minus
Query      151  NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEIEHLILCLFLTRNLTQL*CAXXXXXXXXXXXXXPNLYA*DTSIA*LSIQFSKLPISLAMHIRSQIS*GFLKVPSLNKHHPQNVGLETN*TL  546
                NLSTLKTPINSK DNALTKLFIIL+Q QILKA*ST SNRPEIEHLILCLFLTRNLTQL*CASTSSSVIIS+DSSPNLYA*DTSIA*LS+QFS+LPISLAMHIRSQIS*GFLK+PSLNKHHPQNVGLETN*TL
Subject   6246  NLSTLKTPINSKVDNALTKLFIILKQCQILKA*STASNRPEIEHLILCLFLTRNLTQL*CASTSSSVIISMDSSPNLYA*DTSIA*LSMQFSRLPISLAMHIRSQIS*GFLKIPSLNKHHPQNVGLETN*TL  6641

Range 6: 6693 to 6773 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.4 bits(119) 0.0 25/27(93%) 0/27(0%) Plus/Minus
Query       19  LVLPVRLGLSGTPAVKATKLSSSEINS  99
                + LPVRLGLSGTPAVKATKLSSSEINS
Subject   6693  MYLPVRLGLSGTPAVKATKLSSSEINS  6773

Range 7: 6248 to 6607 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
224.7 bits(484) 0.0 103/120(86%) 0/120(0%) Minus/Plus
Query      185  RFSLFLTPHSVDGACLRREPSRNLN*FGSEYA*PERWAIWRTVLTIMR*RCPMHIDWVSYQLK**QKRRWRHTTIV*GSWLGTSIK*GVQFQACLKWLIRP*VFGVVRVL*II*LKHYQP  544
                RFSLFLTPHSVDGA LRRE SRNLN*FGSEYA*PERWAI RT L IMR*RCPMHIDWVSY  K**Q+RRWRHTTIV*GS LGTSI+*G QFQA LK LIRP*VFG+V VL*II LKH QP
Subject   6248  RFSLFLTPHSVDGAYLRRESSRNLN*FGSEYA*PERWAI*RTALIIMR*RCPMHIDWVSYPSK**QRRRWRHTTIV*GS*LGTSIR*GAQFQAYLKRLIRP*VFGIV*VL*IIWLKHCQP  6607

Range 8: 6653 to 6778 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.5 bits(93) 0.0 31/42(74%) 0/42(0%) Minus/Plus
Query       14  YIVCLXXXXXXX*GS*SQRTRVLWLSLQVFQTVLISRGGPNT  139
                YIV L VVRVV**GS*SQRTRV WLS QVFQ VL S+ G ++
Subject   6653  YIVYLAVVRVV**GS*SQRTRVSWLSQQVFQIVLTSQEGTSS  6778

Grapevine rupestris stem pitting associated virus isolate TEMP BR replicase, 24.4 kDa protein, 12.8 kDa protein, 8.4 kDa protein, and 28 kDa protein genes, complete cds

Sequence ID: KX925556.1 Length: 8700 Number of Matches: 8

Range 1: 6236 to 6757 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
405.7 bits(879) 0.0 167/174(96%) 0/174(0%) Minus/Plus
Query       24  KVQFVSNPTFCGWCLFKEGTFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGR  545
                KVQFVSNPTFCGWCLFKEG FKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFE VD*ALSIW C SIMNNLVKALSAFEF+GVFSVLKFPV+IHSVPGSGKSSLIRELISEDE FVAFTAGVPDSPNLTGR
Subject   6236  KVQFVSNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAVD*ALSIWHCLSIMNNLVKALSAFEFVGVFSVLKFPVIIHSVPGSGKSSLIRELISEDECFVAFTAGVPDSPNLTGR  6757

Range 2: 6237 to 6743 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
322.3 bits(697) 0.0 141/169(83%) 0/169(0%) Plus/Minus
Query       38  *DCLEHLQ*KPQNSRPLRLTPLLNYSYHYQAHYV*QLET*AH*KHL*TRRLIML*LNYS*YSNNAKYLRPNQPLQTGLKLNTSFYACS*PGTSHNCSVPPPPLLSSFQLIAHPIYMHRTPLSHNCQYSSPNCPSLWLCIFAPKLVEVS*RFPP*TSTIHRMWG*KQTEP  544
                *DCLEHL *KP+N+RPLR  PLLNYSYH QAHYV* LE *AH* HL TRR IML*LNYS*YSNNAKYLRPNQPLQ GLKL+ S YAC * G SH+CSVPPP  LSSFQ  AHPIYMHRT LSHNCQYSSP+CPSLWLCIFAPKLVEVS*RF P* STIHRMW *KQTEP
Subject   6237  *DCLEHLL*KPRNTRPLRSIPLLNYSYHCQAHYV**LEI*AH*THLQTRRQIML*LNYS*YSNNAKYLRPNQPLQIGLKLSISSYACF*LGISHSCSVPPPLPLSSFQWRAHPIYMHRTLLSHNCQYSSPDCPSLWLCIFAPKLVEVS*RFLP*ISTIHRMWD*KQTEP  6743

Range 3: 6235 to 6750 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
303.9 bits(657) 0.0 143/172(83%) 0/172(0%) Minus/Plus
Query       31  QGSVCF*PHILWMVLV*GGNLQETSTNLGANMHSQRDGQFGELY*QLCDRGVLCI*IG*AIXXXXXXXXXXGTLQLCEVPG*EQA*NEVFNFRPV*SG*LGLKYLALFEYYE*FS*SIISLRVYRCFQCAQVSSCYT*CAW*W*E*FNKGVNLRGREFCGFHCRCSRQS*SH  546
                QGSVCF* HILWMVL+*G NL ETSTNLGANMHSQRDGQ GELY*QLCDR VLCI*IG*A++*NDDR  GGGTLQLCE+P *+QA*+E+ NFRP+*SG*LGLKYLALFEYYE*FS*SII LRV RC QCAQ+SS YT*CAW W*E*FNKG++LRGR F GFH RCSRQS* H
Subject   6235  QGSVCF*SHILWMVLI*GRNL*ETSTNLGANMHSQRDGQSGELY*QLCDRSVLCI*IG*ALH*NDDRGRGGGTLQLCEIPS*KQA*DEMLNFRPI*SG*LGLKYLALFEYYE*FS*SIICLRVCRCVQCAQISSYYT*CAWQW*E*FNKGIDLRGRVFRGFHSRCSRQS*PH  6750

Range 4: 6235 to 6630 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
244.4 bits(527) 0.0 123/132(93%) 0/132(0%) Plus/Minus
Query      151  NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEIEHLILCLFLTRNLTQL*CAXXXXXXXXXXXXXPNLYA*DTSIA*LSIQFSKLPISLAMHIRSQIS*GFLKVPSLNKHHPQNVGLETN*TL  546
                NLSTL TP NSKADNALTKLFIIL+Q QILKA*ST SNRPEIEHLILCLFLTRNLTQL*CASTSSSVIIS++SSPNLYA*DTSIA*LSIQFS+LPISLAMHIRSQIS*GFLK+PSLNKHHPQNVGLETN*TL
Subject   6235  NLSTLNTPTNSKADNALTKLFIILKQCQILKA*STASNRPEIEHLILCLFLTRNLTQL*CASTSSSVIISMESSPNLYA*DTSIA*LSIQFSRLPISLAMHIRSQIS*GFLKIPSLNKHHPQNVGLETN*TL  6630

Range 5: 6682 to 6762 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.2 bits(112) 0.0 24/27(89%) 0/27(0%) Plus/Minus
Query       19  LVLPVRLGLSGTPAVKATKLSSSEINS  99
                + LPVRLGLSGTPAVKATK SSSEINS
Subject   6682  MYLPVRLGLSGTPAVKATKHSSSEINS  6762

Range 6: 6236 to 6757 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
275.1 bits(594) 0.0 142/174(82%) 0/174(0%) Plus/Minus
Query       24  PPREIRTVWNTCSESHKTLVL*D*LPYXXXXXXXXXXMYNNWKLEHTENTYKLEG**CFN*IIHNTRTTPNT*GLINHFKQA*N*TPHFMLVPNQEPHTIXXXXXXXXXXXXN**LTQSICIGHLYRIIVNTVLQIAHLSGYAYSLPN*LRFLEGSLLKQAPSTECGVRNKLNL  545
                P  E+RTVWNTC ESH+TLVL*D  PY*TTLTT RHTMYNNWK EHTE+TYKLEG *CFN*IIHNT+T PNT*GLIN FK A*N*  H MLV N E HT+VVCLHL  CHHFN  LTQSICIGH YRIIVNTVLQIAHLSGYAYSLPN*LRFL+ S LK APSTECG+RNKLNL
Subject   6236  PSCEVRTVWNTCCESHETLVL*DQFPY*TTLTTARHTMYNNWKFEHTEHTYKLEGR*CFN*IIHNTQTMPNT*GLINRFK*A*N*ASHLMLVSN*ESHTVVVCLHLFLCHHFNGELTQSICIGHFYRIIVNTVLQIAHLSGYAYSLPN*LRFLKDSFLK*APSTECGIRNKLNL  6757

Range 7: 6237 to 6596 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
216.0 bits(465) 0.0 98/120(82%) 0/120(0%) Minus/Plus
Query      185  RFSLFLTPHSVDGACLRREPSRNLN*FGSEYA*PERWAIWRTVLTIMR*RCPMHIDWVSYQLK**QKRRWRHTTIV*GSWLGTSIK*GVQFQACLKWLIRP*VFGVVRVL*II*LKHYQP  544
                RFSLFL PHSVDGA LR+E  RNLN*FGSEYA*PERWAIWRTVLTIMR*+CPMHIDWVS  LK**Q++RWRHTT V* S L TSI+*  QFQA LK LIRP*VFG+V VL*II*LKHY P
Subject   6237  RFSLFLIPHSVDGAYLRKESLRNLN*FGSEYA*PERWAIWRTVLTIMR*KCPMHIDWVSSPLK**QRKRWRHTTTV*DS*LETSIR*DAQFQAYLKRLIRP*VFGIV*VL*II*LKHYLP  6596

Range 8: 6642 to 6767 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.2 bits(101) 0.0 31/42(74%) 0/42(0%) Minus/Plus
Query       14  YIVCLXXXXXXX*GS*SQRTRVLWLSLQVFQTVLISRGGPNT  139
                YIVCL VVRVV**G+*SQRT V WLS QVFQTVL S+ G ++
Subject   6642  YIVCLAVVRVV**GN*SQRTSVSWLSQQVFQTVLTSQEGTSS  6767

Nucleotide Sequence (625 letters)

Query ID:ds2016-58_48
Query definition:No definition line
Query length:589
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 13 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
63
126
189
252
315
378
441
504
567
625

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate SK704 A, complete genome

Sequence ID: KX274274.1 Length: 8725 Number of Matches: 7

Range 1: 6301 to 6921 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
488.6 bits(1060) 0.0 204/207(99%) 0/207(0%) Plus/Plus
Query        3  GIFKKPQLIWERICIAREIGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWHGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNINVPREAHFIK  623
                GIFKKPQLIWERICIARE+GNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVW GVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNI+VPREAHFIK
Subject   6301  GIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWRGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNISVPREAHFIK  6921

Range 2: 6304 to 6921 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
483.1 bits(1048) 0.0 193/206(94%) 0/206(0%) Minus/Minus
Query        6  LYEVCLPWNVDVLVRV*EQHIKTMNIRDRQVLIKYVYLPLHCTPWRVGLDVPSC*IWTVWHTCCESHERLVFRNELPY*ATFTATWNTMNNNWKFKHAEHTNKFKCRQSLD*VIHNTHTMPNT*GLNNNLKQTRN*APHFVLIPNQETHAVIMRFNFLLSHHAYR*FSKSVGIRYLDCIIINAIFQIAYFPSNADPLPNKLRLFKD  623
                LYEVCLPWN DVLVRV*EQHIKTMNIRDRQVLIKYVYLPLHCTPWRVGLDVPSC*IWTVWHTCC+SHERLVFRNELPY*AT TATWNTMNNNWKFKHAEHTNKFKC QSLD*VIHNTHT PNT*GLNN+LKQTRN*APHFVLIPNQETHAVIMRFNFLLSHHAY *FSK +GIR+L+CIIINAIFQIA+FPSNA+PLPNKLRLFKD
Subject   6304  LYEVCLPWNADVLVRV*EQHIKTMNIRDRQVLIKYVYLPLHCTPWRVGLDVPSC*IWTVWHTCCKSHERLVFRNELPY*ATLTATWNTMNNNWKFKHAEHTNKFKC*QSLD*VIHNTHTTPNT*GLNNDLKQTRN*APHFVLIPNQETHAVIMRFNFLLSHHAYG*FSKPIGIRHLNCIIINAIFQIAHFPSNANPLPNKLRLFKD  6921

Range 3: 6300 to 6923 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
435.0 bits(943) 0.0 197/208(95%) 0/208(0%) Plus/Plus
Query        2  GDL*KASAYLGEDLHC*GNRQFGKLH**LCNRGILCLQTWRIIYRRDD*GGS*SAL*LRAFPGSE*AQNEVLNFWFV*GYCLGLKCLAWCEYYE*LSQGFVCI*ICWCVLRA*IXXXXXXXXR*R*K*PNKGAHF*RRVFRGFHSRCARQSKSNRKVHQALLSRVCSAREDKHT**VLVCL*YSWF*CAVLRPLPEHQRSKGGTLHKD  625
                G+L*KASAYLGEDLHC*GN QFGKLH**LCN G+LCL  WRII+RRDD*GGS*SAL*LRAFPGSE*AQNEVLNFWFV*G+CLGLKCLAWCEYYE*LSQGFV I*ICWCVLRA*ISSCCS*CSR*R*+*PNKGAHF*RRVFRGF+SRCARQSKSNRKVHQALLSRVCSAREDKHT**VLVCL*YSWF*CAVLRPLPEHQRSKGGTLHKD
Subject   6300  GNL*KASAYLGEDLHC*GNGQFGKLH**LCN*GVLCL*AWRIIHRRDD*GGS*SAL*LRAFPGSE*AQNEVLNFWFV*GHCLGLKCLAWCEYYE*LSQGFVSI*ICWCVLRA*ISSCCS*CSR*R*E*PNKGAHF*RRVFRGFYSRCARQSKSNRKVHQALLSRVCSAREDKHT**VLVCL*YSWF*CAVLRPLPEHQRSKGGTLHKD  6923

Range 4: 6299 to 6922 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
429.0 bits(930) 0.0 198/208(95%) 0/208(0%) Minus/Minus
Query        1  SL*SVPPLER*CSGKGLRTAHQNHEYQRQTSTHQVCLSSLALHTLESRA*CTFXXXXXXXXXXX*KPRKTRLQK*APLLGYFYRYLEHYEQQLEI*ARRTHQQIQMQTKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSFCAYSEPGNARSYNALQLPPQSSRL*IILQVCRHKIPRLHNYQCNFPNCLFP*QCRSSPK*AEAF*RSP  624
                SL*SVPPLER*CSGKGLRTAHQNHEYQRQTSTHQVCLSSLALHTLESRA*CTFLLDLDCLAHLL*KPRKTRLQK*APLLGY YRYLEHYEQQLEI*ARRTHQQIQM TKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSFCAYSEPGNARSYNALQLPPQSSRL IILQ  RHK P+LHNYQCNFPNC FP*QC+SSPK*AEAF*R P
Subject   6299  SL*SVPPLER*CSGKGLRTAHQNHEYQRQTSTHQVCLSSLALHTLESRA*CTFLLDLDCLAHLL*KPRKTRLQK*APLLGYSYRYLEHYEQQLEI*ARRTHQQIQMLTKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSFCAYSEPGNARSYNALQLPPQSSRLWIILQAYRHKTPQLHNYQCNFPNCPFP*QCKSSPK*AEAF*RFP  6922

Range 5: 6299 to 6922 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
422.2 bits(915) 0.0 194/208(93%) 0/208(0%) Plus/Plus
Query        1  RGSLKSLSLFGRGSALLGK*AIWKIALIIMQSRYLMPTDLENYL*A**LRRKLKRIITACVSWFGISTK*GAQFLVCLRLLFRP*VFGMV*VL*IT*SRLCLHLNLLVCSACLNFQLLFIVFQVAVKVA**GSSFLKTSLSWLSQQVCQTVQI*QEGTSSPTLQGVQCKGR*TYLMSTCLSLIFMVLMCCSQTLTRTSTFQGRHTS*R  624
                R SLKSLSLFGRG ALLGK AIWKIALIIMQ R LMP  LENY *A**LRRKLKRIITACVSWFGISTK*GAQFLVCLR LFRP*VFG+V*VL*IT*SRLC HLNLLVCSACLNFQLLFIVFQVAV+VA**GSSFLKTSLSWL QQVCQTVQI*QEGTSSPTLQGVQCKGR*TYLMSTCLSLIFMVLMCCSQTLTRTS FQGRHTS*R
Subject   6299  RESLKSLSLFGRGFALLGKWAIWKIALIIMQLRCLMPIGLENYP*A**LRRKLKRIITACVSWFGISTK*GAQFLVCLRSLFRP*VFGVV*VL*IT*SRLCQHLNLLVCSACLNFQLLFIVFQVAVRVA**GSSFLKTSLSWLLQQVCQTVQI*QEGTSSPTLQGVQCKGR*TYLMSTCLSLIFMVLMCCSQTLTRTSAFQGRHTS*R  6922

Range 6: 6300 to 6614 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
220.1 bits(474) 0.0 102/105(97%) 0/105(0%) Minus/Minus
Query        2  NSNADKALTKLFIILTPCQTLKA*TITSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPISLAMQILSQIS*GFLKIP  316
                NSNADKALTKLFIILTP QTLKA*T+TSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITP+DNSPSL*A*DTSIA*LSMQFSKLPISLAMQILSQIS*GFLKIP
Subject   6300  NSNADKALTKLFIILTPRQTLKA*TMTSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITPMDNSPSL*A*DTSIA*LSMQFSKLPISLAMQILSQIS*GFLKIP  6614

Range 7: 6684 to 6923 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
187.6 bits(403) 0.0 80/80(100%) 0/80(0%) Minus/Minus
Query      386  VFMKCASLGTLMFW*GSENSTSKP*ISETDKYSSSMFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR  625
                VFMKCASLGTLMFW*GSENSTSKP*ISETDKYSSSMFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR
Subject   6684  VFMKCASLGTLMFW*GSENSTSKP*ISETDKYSSSMFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR  6923

Grapevine rupestris stem pitting associated virus isolate VF1, partial genome

Sequence ID: KT948710.1 Length: 8716 Number of Matches: 8

Range 1: 6302 to 6922 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
482.6 bits(1047) 0.0 202/207(98%) 0/207(0%) Plus/Plus
Query        3  GIFKKPQLIWERICIAREIGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWHGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNINVPREAHFIK  623
                GIFKKPQLIWERICIARE+GNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVW GVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGC VQGKINILDEYLSVSDI GFDVLFSDPYQNI+VPREAHFIK
Subject   6302  GIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWRGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCVVQGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIK  6922

Range 2: 6305 to 6922 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
439.6 bits(953) 0.0 176/206(85%) 0/206(0%) Minus/Minus
Query        6  LYEVCLPWNVDVLVRV*EQHIKTMNIRDRQVLIKYVYLPLHCTPWRVGLDVPSC*IWTVWHTCCESHERLVFRNELPY*ATFTATWNTMNNNWKFKHAEHTNKFKCRQSLD*VIHNTHTMPNT*GLNNNLKQTRN*APHFVLIPNQETHAVIMRFNFLLSHHAYR*FSKSVGIRYLDCIIINAIFQIAYFPSNADPLPNKLRLFKD  623
                LYEVCLPWN DVLV V*EQHIKT NIRDRQVLIKY+YLPLH TPWRVGLDVPSC IWTVW+T C+SH+RLV RN+LPY* TFTATWNTMNNNWKFKH EHTNKFKCRQSLD*VIHNTHT PNT*GLNNNLKQTRN*APHF+LI NQETH VIMR NFLLSHH YR FSKSV IR+L+CI+INAI QIA+F SNAD LPN+LRLFKD
Subject   6305  LYEVCLPWNADVLVGV*EQHIKTRNIRDRQVLIKYIYLPLHYTPWRVGLDVPSCKIWTVWYTRCKSHKRLVLRNKLPY*TTFTATWNTMNNNWKFKHTEHTNKFKCRQSLD*VIHNTHTTPNT*GLNNNLKQTRN*APHFMLISNQETHTVIMRLNFLLSHHTYRQFSKSVSIRHLNCIVINAILQIAHFSSNADSLPNELRLFKD  6922

Range 3: 6301 to 6924 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
388.7 bits(842) 0.0 181/208(87%) 0/208(0%) Plus/Plus
Query        2  GDL*KASAYLGEDLHC*GNRQFGKLH**LCNRGILCLQTWRIIYRRDD*GGS*SAL*LRAFPGSE*AQNEVLNFWFV*GYCLGLKCLAWCEYYE*LSQGFVCI*ICWCVLRA*IXXXXXXXXR*R*K*PNKGAHF*RRVFRGFHSRCARQSKSNRKVHQALLSRVCSAREDKHT**VLVCL*YSWF*CAVLRPLPEHQRSKGGTLHKD  625
                G+L*KASA+LGE+LHC* N QFG+LH**LCN G+LCLQTWRI+YR DD*GGS* AL*L AFPGS+*A NEVLNFW V*GYCLGLKCLAWCEYYE*LSQGFVCI*ICWCVL A*ISSCCS*CSR*R*K* NKGA+F* RVF GF+S C RQSKS RKVHQALLSRVCSAREDK+T**V VCL*Y WF*CAVLRPLPEHQRSKGGTLHKD
Subject   6301  GNL*KASAHLGENLHC*RNGQFGELH**LCN*GVLCLQTWRIVYRCDD*GGS*GAL*LCAFPGSK*A*NEVLNFWSV*GYCLGLKCLAWCEYYE*LSQGFVCI*ICWCVLCA*ISSCCS*CSR*R*K*SNKGAYF*GRVFCGFYSGCTRQSKSYRKVHQALLSRVCSAREDKYT**VPVCL*YFWF*CAVLRPLPEHQRSKGGTLHKD  6924

Range 4: 6301 to 6615 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
220.1 bits(474) 0.0 102/105(97%) 0/105(0%) Minus/Minus
Query        2  NSNADKALTKLFIILTPCQTLKA*TITSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPISLAMQILSQIS*GFLKIP  316
                NSNADKALTKLFIILTP QTLKA*TITSN+PEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPISLAMQILSQ+S*GFLKIP
Subject   6301  NSNADKALTKLFIILTPRQTLKA*TITSNRPEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPISLAMQILSQMS*GFLKIP  6615

Range 5: 6685 to 6924 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
178.4 bits(383) 0.0 75/80(94%) 0/80(0%) Minus/Minus
Query      386  VFMKCASLGTLMFW*GSENSTSKP*ISETDKYSSSMFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR  625
                VFMKCASLGTLMFW*GSENSTSKP ISETD+YSSS+FIFPCT HPGE*GLMYLPVRFGLSGTPAVKATKDSSSE+SSLIR
Subject   6685  VFMKCASLGTLMFW*GSENSTSKPEISETDRYSSSIFIFPCTTHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEISSLIR  6924

Range 6: 6300 to 6923 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
375.9 bits(814) 0.0 177/208(85%) 0/208(0%) Plus/Plus
Query        1  RGSLKSLSLFGRGSALLGK*AIWKIALIIMQSRYLMPTDLENYL*A**LRRKLKRIITACVSWFGISTK*GAQFLVCLRLLFRP*VFGMV*VL*IT*SRLCLHLNLLVCSACLNFQLLFIVFQVAVKVA**GSSFLKTSLSWLSQQVCQTVQI*QEGTSSPTLQGVQCKGR*TYLMSTCLSLIFMVLMCCSQTLTRTSTFQGRHTS*R  624
                R SLKSLS FGR SALL K AIW+IALI MQ R LM TDLEN L* **LRRKL+RIIT CVSWF IS K*GAQFLVCLRLLFRP*VFG+V*VL*IT*SRLCLHLNLLVCS CLNFQLLFIVFQVAVKV **GS FL+TSL WL Q+V QTVQI QEGTSSPTLQGV CKGR* YLMSTCLSLIF+VLMCCSQT TRTS FQGRHTS*R
Subject   6300  RESLKSLSSFGRESALLEKWAIWRIALITMQLRCLMLTDLENCL*V**LRRKLRRIITVCVSWFEISIK*GAQFLVCLRLLFRP*VFGVV*VL*IT*SRLCLHLNLLVCSVCLNFQLLFIVFQVAVKVV**GSLFLRTSLLWLLQRVYQTVQILQEGTSSPTLQGV*CKGR*IYLMSTCLSLIFLVLMCCSQTPTRTSAFQGRHTS*R  6923

Range 7: 6300 to 6728 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
285.2 bits(616) 0.0 123/143(86%) 0/143(0%) Minus/Minus
Query        1  KPRKTRLQK*APLLGYFYRYLEHYEQQLEI*ARRTHQQIQMQTKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSFCAYSEPGNARSYNALQLPPQSSRL*IILQVCRHKIPRLHNYQCNFPNCLFP*QCRSSPK*AEAF*RSP  429
                KP+KTR QK*APLL YFYRYLEHYEQQLEI*A RTHQQIQMQTKP*LSYS*YSHHAKHLRPKQ*PQT+QKLSTSF AY EPGNA SYNA QLPPQSS L* ILQVC+HK P+LH+YQCN PNC F *QCR SPK*AEAF*R P
Subject   6300  KPQKTRPQK*APLLDYFYRYLEHYEQQLEI*AHRTHQQIQMQTKP*LSYS*YSHHAKHLRPKQ*PQTDQKLSTSFYAYFEPGNAHSYNAPQLPPQSSHL*TILQVCKHKTPQLHSYQCNSPNCPFL*QCRFSPK*AEAF*RFP  6728

Range 8: 6765 to 6923 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.0 bits(238) 0.0 48/53(91%) 0/53(0%) Minus/Minus
Query      466  SL*SVPPLER*CSGKGLRTAHQNHEYQRQTSTHQVCLSSLALHTLESRA*CTF  624
                SL*SVPPLER*CSG+GLRTAHQN +YQRQT THQV LSSLALHTLESRA*CTF
Subject   6765  SL*SVPPLER*CSGRGLRTAHQNQKYQRQTGTHQVYLSSLALHTLESRA*CTF  6923

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: Hai1

Sequence ID: AB277787.1 Length: 2876 Number of Matches: 7

Range 1: 557 to 1177 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
480.8 bits(1043) 0.0 200/207(97%) 0/207(0%) Plus/Plus
Query        3  GIFKKPQLIWERICIAREIGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWHGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNINVPREAHFIK  623
                GIFKKPQLIWERICIARE+GNLENCIDNYAIEVSYAYRLGELSIGVMTEEE+EAHYNCVRFLVRNKHKMRCSIS LFEVIV*ALSVW GVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDI GFDVLFSDPYQNI++PREAHFIK
Subject    557  GIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEIEAHYNCVRFLVRNKHKMRCSISSLFEVIV*ALSVWRGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDISGFDVLFSDPYQNISIPREAHFIK  1177

Range 2: 560 to 1177 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
442.8 bits(960) 0.0 177/206(86%) 0/206(0%) Minus/Minus
Query        6  LYEVCLPWNVDVLVRV*EQHIKTMNIRDRQVLIKYVYLPLHCTPWRVGLDVPSC*IWTVWHTCCESHERLVFRNELPY*ATFTATWNTMNNNWKFKHAEHTNKFKCRQSLD*VIHNTHTMPNT*GLNNNLKQTRN*APHFVLIPNQETHAVIMRFNFLLSHHAYR*FSKSVGIRYLDCIIINAIFQIAYFPSNADPLPNKLRLFKD  623
                LYEVCLPWN DVLV V*EQHIKT NIRDRQVLIKY+YLPLHCTPWRVGLDVPSC*IWTVWHT C+SH+R V RN+LPY*ATFT TWNTMNNNWKFK+ EH NKFKCRQSLD*VIHNTHT PNT*GLN N KQTRN* PHF+LI NQETH VIMRFNFLLSHH  R FSKSV IR+L+CIIINAIFQIA+F SNADPLPNKLRLFKD
Subject    560  LYEVCLPWNADVLVGV*EQHIKTRNIRDRQVLIKYIYLPLHCTPWRVGLDVPSC*IWTVWHTRCKSHKRFVLRNKLPY*ATFTTTWNTMNNNWKFKYTEHANKFKCRQSLD*VIHNTHTTPNT*GLNYNFKQTRN*TPHFMLISNQETHTVIMRFNFLLSHHTNRQFSKSVSIRHLNCIIINAIFQIAHFSSNADPLPNKLRLFKD  1177

Range 3: 555 to 1178 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
381.4 bits(826) 0.0 178/208(86%) 0/208(0%) Plus/Plus
Query        1  RGSLKSLSLFGRGSALLGK*AIWKIALIIMQSRYLMPTDLENYL*A**LRRKLKRIITACVSWFGISTK*GAQFLVCLRLLFRP*VFGMV*VL*IT*SRLCLHLNLLVCSACLNFQLLFIVFQVAVKVA**GSSFLKTSLSWLSQQVCQTVQI*QEGTSSPTLQGVQCKGR*TYLMSTCLSLIFMVLMCCSQTLTRTSTFQGRHTS*R  624
                R SLKSLSLFGRGSALL K AIWKIALIIMQ R LM TDLEN L  **LRRKLKRIIT CVSWF IS K*G QFLVCL+L FRP*VFG+V*VL*IT*SRLCLHLNLL CS  LNFQLLFIVFQV VKVA**GS FL+T+L WL Q+VCQTVQI*QEGTSSPTLQGVQCKGR* YLMSTCLSLIF+VLMCCSQT TRTS FQGRHTS*R
Subject    555  RESLKSLSLFGRGSALLEKWAIWKIALIIMQLRCLMLTDLENCLLV**LRRKLKRIITVCVSWFEISIK*GVQFLVCLKL*FRP*VFGVV*VL*IT*SRLCLHLNLLACSVYLNFQLLFIVFQVVVKVA**GSLFLRTNLLWLLQRVCQTVQI*QEGTSSPTLQGVQCKGR*IYLMSTCLSLIFLVLMCCSQTPTRTSAFQGRHTS*R  1178

Range 4: 556 to 1179 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
378.2 bits(819) 0.0 179/208(86%) 0/208(0%) Plus/Plus
Query        2  GDL*KASAYLGEDLHC*GNRQFGKLH**LCNRGILCLQTWRIIYRRDD*GGS*SAL*LRAFPGSE*AQNEVLNFWFV*GYCLGLKCLAWCEYYE*LSQGFVCI*ICWCVLRA*IXXXXXXXXR*R*K*PNKGAHF*RRVFRGFHSRCARQSKSNRKVHQALLSRVCSAREDKHT**VLVCL*YSWF*CAVLRPLPEHQRSKGGTLHKD  625
                G+L*KASAYLGEDLHC* N QFGKLH**LCN G+LCLQTWRI+Y  DD*GG+*SAL*L AFPGS+*A NEV NF FV* Y LGLKCLAWCEYYE*LSQGFVCI*ICW VL  *ISSCCS*CSR* *K*PNKGA+F* R+F GF+S CARQSKSNRKVHQALLSRVCSAREDK+T**VLVCL*Y WF*CAVLRPLPEHQ SKGGTLHKD
Subject    556  GNL*KASAYLGEDLHC*RNGQFGKLH**LCN*GVLCLQTWRIVYWCDD*GGN*SAL*LCAFPGSK*A*NEVFNF*FV*SYSLGLKCLAWCEYYE*LSQGFVCI*ICWRVLCT*ISSCCS*CSR*W*K*PNKGAYF*GRIFCGFYSGCARQSKSNRKVHQALLSRVCSAREDKYT**VLVCL*YFWF*CAVLRPLPEHQHSKGGTLHKD  1179

Range 5: 555 to 1178 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
374.5 bits(811) 0.0 178/208(86%) 0/208(0%) Minus/Minus
Query        1  SL*SVPPLER*CSGKGLRTAHQNHEYQRQTSTHQVCLSSLALHTLESRA*CTFXXXXXXXXXXX*KPRKTRLQK*APLLGYFYRYLEHYEQQLEI*ARRTHQQIQMQTKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSFCAYSEPGNARSYNALQLPPQSSRL*IILQVCRHKIPRLHNYQCNFPNCLFP*QCRSSPK*AEAF*RSP  624
                SL*SVPPLE *CSG+GLRTAHQN +YQRQTSTHQV LSSLALHTLESRA*CTFLLDLDCLAH L*KP+K R QK*APLLGYFY YLEHYEQQLEI*  RT QQIQMQTKP*LSYS*YSHHAKHLRPK * QTN KL+TSF AY EPGNA SYNALQ PPQSS  * ILQVC+HK P+LHNYQCNFPNC F *QCRSSPK*AEAF*R P
Subject    555  SL*SVPPLEC*CSGRGLRTAHQNQKYQRQTSTHQVYLSSLALHTLESRA*CTFLLDLDCLAHPL*KPQKIRPQK*APLLGYFYHYLEHYEQQLEI*VHRTRQQIQMQTKP*LSYS*YSHHAKHLRPKL*LQTN*KLNTSFYAYFEPGNAHSYNALQFPPQSSHQ*TILQVCKHKTPQLHNYQCNFPNCPFL*QCRSSPK*AEAF*RFP  1178

Range 6: 556 to 870 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
215.5 bits(464) 0.0 102/105(97%) 0/105(0%) Minus/Minus
Query        2  NSNADKALTKLFIILTPCQTLKA*TITSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPISLAMQILSQIS*GFLKIP  316
                NSNADKALTKLFIILTP QTLKA*TITSNK EIEHLILCLFRTRKRTQL*CAS SSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPISLAMQILSQIS*GFLKIP
Subject    556  NSNADKALTKLFIILTPRQTLKA*TITSNKLEIEHLILCLFRTRKRTQL*CASISSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPISLAMQILSQIS*GFLKIP  870

Range 7: 940 to 1179 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
178.9 bits(384) 0.0 76/80(95%) 0/80(0%) Minus/Minus
Query      386  VFMKCASLGTLMFW*GSENSTSKP*ISETDKYSSSMFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR  625
                VFMKCASLG LMFW*GSENSTSKP ISETDKYSSS+FIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSE+SSLIR
Subject    940  VFMKCASLGMLMFW*GSENSTSKPEISETDKYSSSIFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEISSLIR  1179

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: Ham1

Sequence ID: AB277788.1 Length: 2876 Number of Matches: 7

Range 1: 557 to 1177 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
480.8 bits(1043) 0.0 198/207(96%) 0/207(0%) Plus/Plus
Query        3  GIFKKPQLIWERICIAREIGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWHGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNINVPREAHFIK  623
                GIFKKPQLIWERICIARE+GNL+NCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWHGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDE+FVAFTAGVPDSPNLTGRYIKPY+PGCAVQGKINILDEYLSVSD  GFDVLFSDPYQN+++PREAHFIK
Subject    557  GIFKKPQLIWERICIAREMGNLDNCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWHGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDEAFVAFTAGVPDSPNLTGRYIKPYAPGCAVQGKINILDEYLSVSDTSGFDVLFSDPYQNVSIPREAHFIK  1177

Range 2: 560 to 1174 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
430.4 bits(933) 0.0 168/205(82%) 0/205(0%) Minus/Minus
Query        6  YEVCLPWNVDVLVRV*EQHIKTMNIRDRQVLIKYVYLPLHCTPWRVGLDVPSC*IWTVWHTCCESHERLVFRNELPY*ATFTATWNTMNNNWKFKHAEHTNKFKCRQSLD*VIHNTHTMPNT*GLNNNLKQTRN*APHFVLIPNQETHAVIMRFNFLLSHHAYR*FSKSVGIRYLDCIIINAIFQIAYFPSNADPLPNKLRLFKD  620
                YEVCL WN D+LVRV*EQHIK  +IRDRQVLIKYVY PLHCTPW VGLDVPSC*IWTVWHTCCE H+ LVFRNELPY*ATFT TWNT+NNNWKFK+ +H NKFK RQS D*VIHNTHTMPNT*GLN+N KQTRN*APH VLI NQETHAVIMRFNFLLSHHAYR*F KSV IR+L+C+I+NAI Q+ +FPSNADP PN+L  FKD
Subject    560  YEVCLSWNADILVRV*EQHIKARSIRDRQVLIKYVYFPLHCTPWSVGLDVPSC*IWTVWHTCCEGHKSLVFRNELPY*ATFTTTWNTVNNNWKFKYTKHANKFKRRQSFD*VIHNTHTMPNT*GLNDNFKQTRN*APHLVLIANQETHAVIMRFNFLLSHHAYR*FPKSVSIRHLNCVIVNAIVQVTHFPSNADPFPNELGFFKD  1174

Range 3: 556 to 870 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
219.2 bits(472) 0.0 101/105(96%) 0/105(0%) Minus/Minus
Query        2  NSNADKALTKLFIILTPCQTLKA*TITSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPISLAMQILSQIS*GFLKIP  316
                NSNADKALTKLFIILTPCQTLKA*TITSNKPEIEHLILCL RTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQ SKLPISLAMQILSQ+S GFLKIP
Subject    556  NSNADKALTKLFIILTPCQTLKA*TITSNKPEIEHLILCLLRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQLSKLPISLAMQILSQMSWGFLKIP  870

Range 4: 940 to 1179 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
172.9 bits(371) 0.0 74/80(92%) 0/80(0%) Minus/Minus
Query      386  VFMKCASLGTLMFW*GSENSTSKP*ISETDKYSSSMFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR  625
                VFMKCASLG L FW*GSENSTSKP +SETDKYSSSMFIFPCTAHPG *GLMYLPVRFGLSGTPAVKATK SSSEMSSLIR
Subject    940  VFMKCASLGMLTFW*GSENSTSKPEVSETDKYSSSMFIFPCTAHPGA*GLMYLPVRFGLSGTPAVKATKASSSEMSSLIR  1179

Range 5: 556 to 1179 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
365.3 bits(791) 0.0 172/208(83%) 0/208(0%) Plus/Plus
Query        2  GDL*KASAYLGEDLHC*GNRQFGKLH**LCNRGILCLQTWRIIYRRDD*GGS*SAL*LRAFPGSE*AQNEVLNFWFV*GYCLGLKCLAWCEYYE*LSQGFVCI*ICWCVLRA*IXXXXXXXXR*R*K*PNKGAHF*RRVFRGFHSRCARQSKSNRKVHQALLSRVCSAREDKHT**VLVCL*YSWF*CAVLRPLPEHQRSKGGTLHKD  625
                G+L*K  A+LG+DLHC*GN   G+LH* L N G+LCLQTW IIYRRDD*GGS*SAL*LRAFPGS+*AQ+EVLNFWFV* Y LGLKCLAWCEYYE*LSQ FVC+*ICW VL  *ISSCCS CSR* *K*PNKGAHF*RR F G HSRCARQSKSNRKVHQAL SRVCSARE+KHT**VLVCL*Y W *CAVLRPLPE Q SK GTLHK+
Subject    556  GNL*KTPAHLGKDLHC*GNG*LGQLH*QLRN*GVLCLQTWGIIYRRDD*GGS*SAL*LRAFPGSQ*AQDEVLNFWFV*SYRLGLKCLAWCEYYE*LSQSFVCV*ICWRVLCT*ISSCCSQCSR*W*K*PNKGAHF*RRGFCGLHSRCARQSKSNRKVHQALRSRVCSARENKHT**VLVCL*YFWL*CAVLRPLPECQHSKRGTLHKN  1179

Range 6: 555 to 1178 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
364.9 bits(790) 0.0 170/208(82%) 0/208(0%) Plus/Plus
Query        1  RGSLKSLSLFGRGSALLGK*AIWKIALIIMQSRYLMPTDLENYL*A**LRRKLKRIITACVSWFGISTK*GAQFLVCLRLLFRP*VFGMV*VL*IT*SRLCLHLNLLVCSACLNFQLLFIVFQVAVKVA**GSSFLKTSLSWLSQQVCQTVQI*QEGTSSPTLQGVQCKGR*TYLMSTCLSLIFMVLMCCSQTLTRTSTFQGRHTS*R  624
                R SLK+ S FG+GSALLGK   W IAL I Q R LM TDL NYL*A**LRRKLKRIITACVSWF IST+*GAQFLVCL+L FRP*VFGMV*VL*IT*S+LCL LNLL C   LNFQLLF VFQV VKVA**GSSFLKT L W SQQVCQTVQI*QEGTSSPTLQGVQCKG+*TYLMSTCLSLI + LMCCSQTLTR S FQ RHTS*+
Subject    555  RESLKNPSSFGKGSALLGKWVTWTIALTITQLRCLMLTDLGNYL*A**LRRKLKRIITACVSWFAISTR*GAQFLVCLKLSFRP*VFGMV*VL*IT*SKLCLRLNLLACFVYLNFQLLFTVFQVVVKVA**GSSFLKTRLLWPSQQVCQTVQI*QEGTSSPTLQGVQCKGK*TYLMSTCLSLILLALMCCSQTLTRMSAFQERHTS*K  1178

Range 7: 555 to 1175 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
345.6 bits(748) 0.0 170/207(82%) 0/207(0%) Minus/Minus
Query        1  L*SVPPLER*CSGKGLRTAHQNHEYQRQTSTHQVCLSSLALHTLESRA*CTFXXXXXXXXXXX*KPRKTRLQK*APLLGYFYRYLEHYEQQLEI*ARRTHQQIQMQTKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSFCAYSEPGNARSYNALQLPPQSSRL*IILQVCRHKIPRLHNYQCNFPNCLFP*QCRSSPK*AEAF*RSP  621
                L*SVP LE * SGKGLRTAHQ+ +YQRQTSTHQVCL SLALHTLE RA*CTFLLDLDCLAHLL*+P+K RLQK*APLLGYFY YLEH EQQLEI*  +T QQIQ QTK *LSYS*YSHHAKHLRPK+* QTNQKLSTS CAY EPGNARSYNALQLPPQSSRL*II QVC+HK P+L N QCN P+  FP*QCRS PK*A  F*R P
Subject    555  L*SVPLLEC*HSGKGLRTAHQSQKYQRQTSTHQVCLFSLALHTLERRA*CTFLLDLDCLAHLL*RPQKPRLQK*APLLGYFYHYLEHCEQQLEI*VHKTRQQIQTQTKL*LSYS*YSHHAKHLRPKR*LQTNQKLSTSSCAYCEPGNARSYNALQLPPQSSRL*IIPQVCKHKTPQLRNCQCNCPSYPFP*QCRSFPK*AGVF*RFP  1175

Grapevine rupestris stem pitting associated virus isolate CS BR, complete genome

Sequence ID: KX958435.1 Length: 8743 Number of Matches: 7

Range 1: 6302 to 6922 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
484.9 bits(1052) 0.0 202/207(98%) 0/207(0%) Plus/Plus
Query        3  GIFKKPQLIWERICIAREIGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWHGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNINVPREAHFIK  623
                GIFKKPQLIWERICIARE+GNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVW GVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQG+INILDEYLSVSDI GFDVLFSDPYQNIN+PREAHFIK
Subject   6302  GIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWRGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGRINILDEYLSVSDISGFDVLFSDPYQNINIPREAHFIK  6922

Range 2: 6305 to 6922 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
447.8 bits(971) 0.0 176/206(85%) 0/206(0%) Minus/Minus
Query        6  LYEVCLPWNVDVLVRV*EQHIKTMNIRDRQVLIKYVYLPLHCTPWRVGLDVPSC*IWTVWHTCCESHERLVFRNELPY*ATFTATWNTMNNNWKFKHAEHTNKFKCRQSLD*VIHNTHTMPNT*GLNNNLKQTRN*APHFVLIPNQETHAVIMRFNFLLSHHAYR*FSKSVGIRYLDCIIINAIFQIAYFPSNADPLPNKLRLFKD  623
                LYEVCLPWNVDVLV V*EQH+KT N+RDRQ+LIKY+Y PLHCTPWRVGLDVPSC*IWTVWHT C+SH+RLV RNELPY ATFTATWNTM+NNWKFK+ EHTNKFKCRQSLD*VIHNTHT PNT*GLNNNLKQTRN*APHF+ I NQETH VIMR NFLLSHH YR FSKSV IR+L+C+IINAIFQIA+F SNADPLPNKLR FKD
Subject   6305  LYEVCLPWNVDVLVGV*EQHVKTRNVRDRQILIKYIYPPLHCTPWRVGLDVPSC*IWTVWHTRCKSHKRLVLRNELPYQATFTATWNTMDNNWKFKYTEHTNKFKCRQSLD*VIHNTHTTPNT*GLNNNLKQTRN*APHFMFISNQETHTVIMRLNFLLSHHTYRQFSKSVSIRHLNCVIINAIFQIAHFSSNADPLPNKLRFFKD  6922

Range 3: 6304 to 6924 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
386.0 bits(836) 0.0 179/207(86%) 0/207(0%) Plus/Plus
Query        5  DL*KASAYLGEDLHC*GNRQFGKLH**LCNRGILCLQTWRIIYRRDD*GGS*SAL*LRAFPGSE*AQNEVLNFWFV*GYCLGLKCLAWCEYYE*LSQGFVCI*ICWCVLRA*IXXXXXXXXR*R*K*PNKGAHF*RRVFRGFHSRCARQSKSNRKVHQALLSRVCSAREDKHT**VLVCL*YSWF*CAVLRPLPEHQRSKGGTLHKD  625
                +L*K SAYLGEDLHC* N QFGKLH**L N G+LCLQTWRI+YR DD*GGS* AL*L AFPGS+*  NEVLNFWFV*GYCLGLKCLAWCEYYE*LSQGFVCI*ICWCVL  *ISSCC *CSR*R*K*P+KGAHF* RVF GF+S CARQSKSNRKVHQALLSRVCSAREDK+T**V VCL*+ WF* AVLRPLPEHQ SKGGTLHKD
Subject   6304  NL*KTSAYLGEDLHC*RNGQFGKLH**LRN*GVLCLQTWRIVYRCDD*GGS*GAL*LCAFPGSK*T*NEVLNFWFV*GYCLGLKCLAWCEYYE*LSQGFVCI*ICWCVLCT*ISSCCP*CSR*R*K*PDKGAHF*GRVFCGFYSGCARQSKSNRKVHQALLSRVCSAREDKYT**VFVCL*HFWF*RAVLRPLPEHQHSKGGTLHKD  6924

Range 4: 6301 to 6615 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
222.8 bits(480) 0.0 104/105(99%) 0/105(0%) Minus/Minus
Query        2  NSNADKALTKLFIILTPCQTLKA*TITSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPISLAMQILSQIS*GFLKIP  316
                NSNADKALTKLFIILTP QTLKA*TITSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPISLAMQILSQIS*GFLKIP
Subject   6301  NSNADKALTKLFIILTPRQTLKA*TITSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPISLAMQILSQIS*GFLKIP  6615

Range 5: 6685 to 6924 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
176.6 bits(379) 0.0 75/80(94%) 0/80(0%) Minus/Minus
Query      386  VFMKCASLGTLMFW*GSENSTSKP*ISETDKYSSSMFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR  625
                VFMKCASLG LMFW*GSENSTSKP +SETDKYSSS+FI PCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR
Subject   6685  VFMKCASLGMLMFW*GSENSTSKPEMSETDKYSSSIFILPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR  6924

Range 6: 6306 to 6923 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
377.7 bits(818) 0.0 177/206(86%) 0/206(0%) Plus/Plus
Query        7  SLKSLSLFGRGSALLGK*AIWKIALIIMQSRYLMPTDLENYL*A**LRRKLKRIITACVSWFGISTK*GAQFLVCLRLLFRP*VFGMV*VL*IT*SRLCLHLNLLVCSACLNFQLLFIVFQVAVKVA**GSSFLKTSLSWLSQQVCQTVQI*QEGTSSPTLQGVQCKGR*TYLMSTCLSLIFMVLMCCSQTLTRTSTFQGRHTS*R  624
                SLK+LSLFGRGSALL K AIWKIALII Q R LM TDLEN L* **LRRKL+RIIT CVSWF I+ K*GAQFLVCLRLLFRP*VFG+V*VL*IT*SRLCLHLNLLVCS  LNFQLL IVFQVAVKVA**GSSFL+TSL WL Q+VCQTVQI*QEGTSSPTLQGVQCKG * YLMS CLSL F+VL CCSQT TRTSTFQGRHTS*R
Subject   6306  SLKNLSLFGRGSALLEKWAIWKIALIITQLRCLMLTDLENCL*V**LRRKLRRIITVCVSWFEINIK*GAQFLVCLRLLFRP*VFGVV*VL*IT*SRLCLHLNLLVCSVYLNFQLLSIVFQVAVKVA**GSSFLRTSLLWLLQRVCQTVQI*QEGTSSPTLQGVQCKGG*IYLMSICLSLTFLVLTCCSQTPTRTSTFQGRHTS*R  6923

Range 7: 6306 to 6923 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
373.1 bits(808) 0.0 177/206(86%) 0/206(0%) Minus/Minus
Query        7  SL*SVPPLER*CSGKGLRTAHQNHEYQRQTSTHQVCLSSLALHTLESRA*CTFXXXXXXXXXXX*KPRKTRLQK*APLLGYFYRYLEHYEQQLEI*ARRTHQQIQMQTKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSFCAYSEPGNARSYNALQLPPQSSRL*IILQVCRHKIPRLHNYQCNFPNCLFP*QCRSSPK*AEAF*R  624
                SL*SVPPLE *CSG+GLRTA QN + QRQT+THQV LSSLALHTLESRA*CTFLLDLDCLAH L*KP+KTR QK*APL GYFYRYLEHY QQLEI*  RTHQQIQMQTKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSF  Y EPGNA SYNA QLPPQSS L* ILQVC+HK P+L NYQCNFPNC F *QCRSSPK*AE F*R
Subject   6306  SL*SVPPLEC*CSGRGLRTARQNQKCQRQTNTHQVYLSSLALHTLESRA*CTFLLDLDCLAHPL*KPQKTRPQK*APLSGYFYRYLEHYGQQLEI*VHRTHQQIQMQTKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSFYVYFEPGNAHSYNAPQLPPQSSHL*TILQVCKHKTPQLRNYQCNFPNCPFL*QCRSSPK*AEVF*R  6923

Nucleotide Sequence (1158 letters)

Query ID:ds2016-58_48
Query definition:No definition line
Query length:589
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 13 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
116
232
348
464
580
696
812
928
1044
1158

Descriptions

Alignments

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OB1

Sequence ID: AB277783.1 Length: 2876 Number of Matches: 16

Range 1: 605 to 1567 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
753.4 bits(1638) 0.0 312/321(97%) 0/321(0%) Minus/Plus
Query      194  REMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWRVVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGRINILDEYLSVSDISGFDVLFSDPYQNVSVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPIDDRHRHW  1156
                REMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALS+W  VIIMNNLVKALSTFEFVG+YSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKG+INILDEYLSVSDISGFDVLFSDPYQN+SVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPIDD   HW
Subject    605  REMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHGVIIMNNLVKALSTFEFVGIYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPIDDWLGHW  1567

Range 2: 605 to 1567 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
720.9 bits(1567) 0.0 304/321(95%) 0/321(0%) Plus/Minus
Query      194  PMPMPIVNGVIVLAQFAGC*KGISLHDDQLLSMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSYLTRKFEIGIMRSR*INCLLAKAN*HTLNIQLKWRTCNHFIRPVTMQIKTKGQKVLTCIFAKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYPPFYSTARGVWLDVPSREVGSVGNAGRKGYEALVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHNTPNT*GLIYSFKQPGN*APHLVLISN*EPHTVVVCFNFLFIHHFN*QLAQPVGIGYLNCIVINAVLQVTHFT  1156
                PMP PIVNGVIVLAQFAGC*KGISLHDDQ LSMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSYLTRKFEIGIMRSR*INCLLAKAN HTLNIQLKWR CNHFIRPVTMQIKTKGQKVLTCIFAKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVY P YST R VWL+VP REVGSVGNAGRKGYE LVLSDKFSY*T FTTTRNA+NNNWKSEHAINTHKLKRRQSFN*VIHNNH  PNT*GLIYSFKQP N*APHLV ISN*EPHTVVVCFNFLFIHHFN*QLAQPVGIGYLNCIVINAVLQVTHFT
Subject    605  PMPKPIVNGVIVLAQFAGC*KGISLHDDQFLSMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSYLTRKFEIGIMRSR*INCLLAKANQHTLNIQLKWRACNHFIRPVTMQIKTKGQKVLTCIFAKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYLPLYSTTRRVWLNVPPREVGSVGNAGRKGYETLVLSDKFSY*TAFTTTRNAVNNNWKSEHAINTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQPRN*APHLVFISN*EPHTVVVCFNFLFIHHFN*QLAQPVGIGYLNCIVINAVLQVTHFT  1567

Range 3: 940 to 1572 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
470.7 bits(1021) 0.0 204/211(97%) 0/211(0%) Plus/Minus
Query      189  ICQCLCRSSMG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLTF*YGSENNTSKPEMSLTDRYSSSMFILPFTAQPGEYGLMYLPERLGVSGTPAVKAMKLSSSVTSSLIK  821
                + QC  +SSMG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTL F*YGSENNTSKPEMSLTDRYSSSMFI PFTAQPGEYGLMYLPERLGVSGTPAVKAMKLSSSVTSSLIK
Subject    940  LSQCPSQSSMG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLIF*YGSENNTSKPEMSLTDRYSSSMFIFPFTAQPGEYGLMYLPERLGVSGTPAVKAMKLSSSVTSSLIK  1572

Range 4: 603 to 962 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
264.1 bits(570) 0.0 113/120(94%) 0/120(0%) Plus/Minus
Query      799  Q*QVLLLNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SQHAKHLRPNL*LQTTRKLSTSSCAYF*LGTAHSCSVLQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFHE  1158
                Q*QVLLLN FYHYQER EQQLEI*ARYK+PQTQT*TKL*LSYS**S HAK+LRPNL*LQTT+KLSTSSC YF*LGTAHSCSVLQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFHE
Subject    603  Q*QVLLLNCFYHYQERCEQQLEI*ARYKYPQTQT*TKL*LSYS**SHHAKYLRPNL*LQTTQKLSTSSCVYF*LGTAHSCSVLQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFHE  962

Range 5: 604 to 1569 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
649.4 bits(1411) 0.0 304/322(94%) 0/322(0%) Minus/Plus
Query      192  S*NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*STLQLCAVPS*K*AQDEVLNFRVV*SYRLGLKCLACCDYYE*LS*SFVYV*VCGCL*RAQIXXXXXXXXXXW*K*FNKRTCH*GRELHSLYGRRSRHSQPLWKVHQAILPWLCCKREDKHT**VSVCK*HFWF*RVIF*PISKCQCSKGGSLHKVKDLQIWRKYM*VPSVLWF*FA**QV**SDYRFAI*VGC*GCANLLWQGGS*FSGCA*FRFQTSL*GTRCYI*CCYLIEIKGSDLR**ALVLHCCNKT*KEVDHHAVKCLFSNLRIGPKLSPH*RSA*ALA  1157
                S*NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*STLQLCAVPS*K* QDEVLNF VV*SYRLGLK LA CDYYE*LS*SFVYV*VCG L*RAQISSCCS RSW*W*K FNKRTCH*GRE HSLYGRRSRHSQPLW+VH AIL WLCCK EDKHT**VSVCK*HFWF*RVIF*PISK QCSKGGSLHKVKDLQIWRKYM*VPSVLWF*FA**QV**SDYR AI*VGC*GCA+LLWQGGS*FSGCA*FRFQTSL*GTRCYI*CCYLIEIKGSDLR**ALVLHCCNKT*KE+DHHAVKCLFSNLRIGPKLSPH*R A ALA
Subject    604  S*NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*STLQLCAVPS*K*TQDEVLNFWVV*SYRLGLKYLAWCDYYE*LS*SFVYV*VCGYL*RAQISSCCSQRSW*W*KQFNKRTCH*GREFHSLYGRRSRHSQPLWEVH*AILSWLCCKGEDKHT**VSVCK*HFWF*RVIF*PISKYQCSKGGSLHKVKDLQIWRKYM*VPSVLWF*FA**QV**SDYRLAI*VGC*GCADLLWQGGS*FSGCA*FRFQTSL*GTRCYI*CCYLIEIKGSDLR**ALVLHCCNKT*KEIDHHAVKCLFSNLRIGPKLSPH*RLAWALA  1569

Range 6: 1002 to 1568 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
432.2 bits(937) 0.0 179/189(95%) 0/189(0%) Plus/Minus
Query      193  ANAYADRQWGDSFGPIRRLLKRHFTA**STSFYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLVPHKEV*NRNYAQPLNQLPPCQSKLAHPQHPTQMANL*SLHQTCHYAN*NQRTEGTYMYFRQICRSLTL*SEPPLEH*HFDMGQKITRQNQKCHLQTDTHQVCLSSLLQHSQGSMA*CTFQRGWEC  759
                ANA A+RQWGDSFGPIRRLLKRHFTA**S SFYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLVPHKEV*NRNYAQPLNQLPPCQSK AHPQHPTQMA+L*SLHQTCHYAN*NQRTEGTYMYFRQICRSLTL*SEPPLEH*+FDMGQKITRQNQKCHLQTDTHQVCLSS LQH+Q SMA*CT QRGWEC
Subject   1002  ANAQANRQWGDSFGPIRRLLKRHFTA**SISFYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLVPHKEV*NRNYAQPLNQLPPCQSKSAHPQHPTQMASL*SLHQTCHYAN*NQRTEGTYMYFRQICRSLTL*SEPPLEH*YFDMGQKITRQNQKCHLQTDTHQVCLSSPLQHNQESMA*CTSQRGWEC  1568

Range 7: 604 to 861 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
175.2 bits(376) 0.0 83/86(97%) 0/86(0%) Plus/Minus
Query      900  VDKALTKLFIIITTRQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISR  1157
                VDKALTKLFIIIT  Q LKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISR
Subject    604  VDKALTKLFIIITPCQILKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISR  861

Range 8: 867 to 1313 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
291.6 bits(630) 0.0 138/149(93%) 0/149(0%) Minus/Plus
Query      448  SLWVFIACSDFQLLFIAFLXXXXXXX*ENLSLRTRAS*PLRPAFPTLPTSLEGTSSHTPLAVL*KGG*TYLMSICL*VTFLVLTCYFLTHIKMSVFQGRLTS*SQRPADLAKIHVSTFCPLVLICIVTGLMK*LQVRHLSWMLRVC*FA  894
                SLWVFIACSDFQLLF AFLVVVK V**ENLSLRTR S*PLRPAFPTLPTSL GT SHT L VL*+G *TYLMSICL*VTFLVLTCYFLTHIK+SVFQGRLTS*SQRPADLAKIHVSTFCPLVLICIVTGLMK*LQ RHLSWMLRVC*FA
Subject    867  SLWVFIACSDFQLLFTAFLVVVKAV**ENLSLRTRVS*PLRPAFPTLPTSLGGTLSHTLLVVL*RGR*TYLMSICL*VTFLVLTCYFLTHIKISVFQGRLTS*SQRPADLAKIHVSTFCPLVLICIVTGLMK*LQARHLSWMLRVC*FA  1313

Range 9: 603 to 827 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
165.6 bits(355) 0.0 71/75(95%) 0/75(0%) Minus/Plus
Query      934  LVKWVTWRTALITMQLRYPMPTGWASCQLK**MKRKLKHTTTVCGS*LEISTR*GAQFPGCLKL*IRP*VFGVL*  1158
                LVKWVTWRTALITMQLRYPMPTGWASCQLK**MKRKLKHTTTVCGS*LEI+TR*GAQF GCLKL*IRP*VFG++*
Subject    603  LVKWVTWRTALITMQLRYPMPTGWASCQLK**MKRKLKHTTTVCGS*LEINTR*GAQFLGCLKL*IRP*VFGMV*  827

Range 10: 1359 to 1550 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
150.9 bits(323) 0.0 63/64(98%) 0/64(0%) Minus/Plus
Query      211  SNFLVRYEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIERS*SSCSEMPFQQPANWAKTITPLT  402
                SNFLVRYEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIER+*SSCSEMPFQQPANWAKTITPLT
Subject   1359  SNFLVRYEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIERN*SSCSEMPFQQPANWAKTITPLT  1550

Range 11: 1410 to 1604 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
95.0 bits(201) 0.0 41/65(63%) 0/65(0%) Minus/Minus
Query        2  WQI*PTYEKQHQPNAQPQRQWGDNFGPNPQLLKKQFTA**STPIYVLLHQCKTTTYHRT*DPLIS  196
                WQI* + E +H  NAQ  RQWGD+FGP  +LLK+ FTA**S   YVLL QC+T+ YHR  DPLIS
Subject   1410  WQI*LS*EMKH*ANAQANRQWGDSFGPIRRLLKRHFTA**SISFYVLLQQCRTSAYHRRSDPLIS  1604

Range 12: 1409 to 1600 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.3 bits(193) 0.0 41/64(64%) 0/64(0%) Minus/Minus
Query        1  KYDLLTKSSTNPMPNPNDNGGIILAQIPSC*KSNSLHDDPHLSMSCCTNVKPRHIIGRRIP*SQ  192
                K+D L K ST PMP P  NG I+LAQ   C*K  SLHDD  LSMSCC+NV+P  IIG RIP* Q
Subject   1409  KFDFLRK*STKPMPKPIVNGVIVLAQFAGC*KGISLHDDQFLSMSCCSNVEPVLIIGGRIP*FQ  1600

Range 13: 1414 to 1608 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.0 bits(190) 0.0 37/65(57%) 0/65(0%) Minus/Minus
Query        6  ALANMTYLRKAAPTQCPTPTTMGG*FWPKSPAAEKAIHCMMIHTYLCPVAPM*NHDISSDVGSPD  200
                ++AN+T+L   A +QCP+ ++MG *FWP S  AEKA HCMMI+ +LC VA M*N  +SS+VGS D
Subject   1414  SMANLTFLGNEALSQCPSQSSMG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLD  1608

Range 14: 1409 to 1603 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.0 bits(190) 0.0 41/65(63%) 0/65(0%) Plus/Plus
Query        1  LRSGDPTSDDMSWFYIGATGHR*VWIIMQ*IAFSAAGDLGQNYPPIVVGVGHWVGAAFRK*VIFA  195
                L+S DPTSDD  WFYI AT HR   IIMQ* AFSA  +LGQNY PI   +GHW+ A+F K V FA
Subject   1409  LKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPIDDWLGHWLSASFPKKVKFA  1603

Range 15: 1411 to 1602 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
85.8 bits(181) 0.0 37/64(58%) 0/64(0%) Plus/Plus
Query        3  EIRGSYVR*YVVVLHWCNRT*IGVDHHAVNCFFSSWGFGPKLSPHCRWGWALGWCCFS*VGHIC  194
                EI+GS +R*  +VLH CN+T*  +DHHAV C FS+   GPKLSPH R  WAL  C  S*   IC
Subject   1411  EIKGSDLR**ALVLHCCNKT*KEIDHHAVKCLFSNLRIGPKLSPH*RLAWALA*CFIS*ESQIC  1602

Range 16: 1410 to 1532 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.1 bits(116) 0.0 26/41(63%) 0/41(0%) Plus/Plus
Query        2  *DQGILRPMICRGFTLVQQDIDRCGSSCSELLFQQLGIWAK  124
                *+QGI  PMI  G TL+QQDI+R  SSCSE+ FQQ   WAK
Subject   1410  *NQGIRPPMISTGSTLLQQDIERN*SSCSEMPFQQPANWAK  1532

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 17

Range 1: 6349 to 7311 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
752.5 bits(1636) 0.0 311/321(97%) 0/321(0%) Minus/Plus
Query      194  REMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWRVVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGRINILDEYLSVSDISGFDVLFSDPYQNVSVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPIDDRHRHW  1156
                REMGNLENCIDNYAIEVSYAYRLGEL+IEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVW  VIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELVTEDE+FIAFTAGVPDTPNLSGRYIKPYSPGCAVKG+INILDEYLSVSDISGFDVLFSDPYQN+SVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHP+DD   HW
Subject   6349  REMGNLENCIDNYAIEVSYAYRLGELAIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELVTEDENFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPVDDWRGHW  7311

Range 2: 6349 to 7311 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
721.8 bits(1569) 0.0 306/321(95%) 0/321(0%) Plus/Minus
Query      194  PMPMPIVNGVIVLAQFAGC*KGISLHDDQLLSMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSYLTRKFEIGIMRSR*INCLLAKAN*HTLNIQLKWRTCNHFIRPVTMQIKTKGQKVLTCIFAKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYPPFYSTARGVWLDVPSREVGSVGNAGRKGYEALVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHNTPNT*GLIYSFKQPGN*APHLVLISN*EPHTVVVCFNFLFIHHFN*QLAQPVGIGYLNCIVINAVLQVTHFT  1156
                PMP PIVNGVIVLAQFAGC*KGISLHDDQ LSMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTS+LTRKFEI IMRSR*INCLLAKAN*HTLNIQLKWRTCNHFIRPVTMQIKTKGQKVLTCIFAKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVY PFYST R VWLDVP REVG V NAGRKGYE LVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNH  PNT*GLIYSFKQP N*APHLVLISN*EPHTVVVCFNFLFIHHFN QLAQPVGIGYLNCIVINAVLQVTHFT
Subject   6349  PMPTPIVNGVIVLAQFAGC*KGISLHDDQFLSMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSHLTRKFEIRIMRSR*INCLLAKAN*HTLNIQLKWRTCNHFIRPVTMQIKTKGQKVLTCIFAKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYLPFYSTTRRVWLDVPPREVGCVRNAGRKGYEILVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQPRN*APHLVLISN*EPHTVVVCFNFLFIHHFNCQLAQPVGIGYLNCIVINAVLQVTHFT  7311

Range 3: 6684 to 7310 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
464.8 bits(1008) 0.0 202/209(97%) 0/209(0%) Plus/Minus
Query      195  QCLCRSSMG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLTF*YGSENNTSKPEMSLTDRYSSSMFILPFTAQPGEYGLMYLPERLGVSGTPAVKAMKLSSSVTSSLIK  821
                QC  +SS G**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTL F*YGSENNTSKPEMSLTDRYSSSMFI PFTAQPGEYGLMYLPERLGVSGTPAVKAMK SSSVTSSLIK
Subject   6684  QCPRQSSTG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLIF*YGSENNTSKPEMSLTDRYSSSMFIFPFTAQPGEYGLMYLPERLGVSGTPAVKAMKFSSSVTSSLIK  7310

Range 4: 6347 to 6706 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
276.9 bits(598) 0.0 117/120(98%) 0/120(0%) Plus/Minus
Query      799  Q*QVLLLNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SQHAKHLRPNL*LQTTRKLSTSSCAYF*LGTAHSCSVLQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFHE  1158
                Q*QVLLLNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**S HAKHLRPNL*LQTT+KLSTSSCAYF*LGTAHSCSVLQLPLHSSFQL TRPACRHRIPQLHSYQCSSPGYPFHE
Subject   6347  Q*QVLLLNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*LGTAHSCSVLQLPLHSSFQLPTRPACRHRIPQLHSYQCSSPGYPFHE  6706

Range 5: 6675 to 7313 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
465.2 bits(1009) 0.0 201/213(94%) 0/213(0%) Minus/Plus
Query      192  *K*FNKRTCH*GRELHSLYGRRSRHSQPLWKVHQAILPWLCCKREDKHT**VSVCK*HFWF*RVIF*PISKCQCSKGGSLHKVKDLQIWRKYM*VPSVLWF*FA**QV**SDYRFAI*VGC*GCANLLWQGGS*FSGCA*FRFQTSL*GTRCYI*CCYLIEIKGSDLR**ALVLHCCNKT*KEVDHHAVKCLFSNLRIGPKLSPH*RSA*ALA  830
                *K*FNKRTCH*GRE HSLYGRRS H+QPLW+VHQAIL WLCCKREDKHT**VSVCK*HFWF*RVIF*PISK QCSKGGSLHKVKDLQIWRKYM*VPSVLWF*FA**QV**SDYRFAI*VGC*GCANLLWQGGS*FSGCA*F FQTSL*G RCYI*CCYLIEIKGSDLR**ALVLHCCNKT*KE+DHHAVKCLFSNLRIGPKLSP *R A ALA
Subject   6675  *K*FNKRTCH*GREFHSLYGRRS*HTQPLWEVHQAILSWLCCKREDKHT**VSVCK*HFWF*RVIF*PISKYQCSKGGSLHKVKDLQIWRKYM*VPSVLWF*FA**QV**SDYRFAI*VGC*GCANLLWQGGS*FSGCA*F*FQTSL*GARCYI*CCYLIEIKGSDLR**ALVLHCCNKT*KEIDHHAVKCLFSNLRIGPKLSPR*RLAWALA  7313

Range 6: 6348 to 6641 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
201.3 bits(433) 0.0 95/98(97%) 0/98(0%) Minus/Plus
Query      864  S*NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*STLQLCAVPS*K*AQDEVLNFRVV*SYRLGLKCLACCDYYE*LS*SFVYV*VCGCL*RAQI  1157
                S*NG*PGELH**LCN*GILCLQAGRV N*NDE*RGS*STLQLCAVPS*K*AQDEVLNF VV*SYRLGLKCLA CDYYE*LS*SFVYV*VCGCL*RAQI
Subject   6348  S*NG*PGELH**LCN*GILCLQAGRVGN*NDE*RGS*STLQLCAVPS*K*AQDEVLNFWVV*SYRLGLKCLAWCDYYE*LS*SFVYV*VCGCL*RAQI  6641

Range 7: 6746 to 7312 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
428.6 bits(929) 0.0 178/189(94%) 0/189(0%) Plus/Minus
Query      193  ANAYADRQWGDSFGPIRRLLKRHFTA**STSFYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLVPHKEV*NRNYAQPLNQLPPCQSKLAHPQHPTQMANL*SLHQTCHYAN*NQRTEGTYMYFRQICRSLTL*SEPPLEH*HFDMGQKITRQNQKCHLQTDTHQVCLSSLLQHSQGSMA*CTFQRGWEC  759
                ANA+A+RQ GDSFGPIRRLLKRHFTA**S SFYVLLQQCRTSAYHRRSDPLISIR*QHQM*HL PHKEV*N+NYAQPLNQLPPCQSKLAHPQHPTQMANL*SLHQTCHYAN*NQRTEGTYMYFRQICRSLTL*SEPPLEH*+FDMGQKITRQNQKCHLQTDTHQVCLSSLLQH+Q SMA*CT QRGW C
Subject   6746  ANAHANRQRGDSFGPIRRLLKRHFTA**SISFYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLAPHKEV*NQNYAQPLNQLPPCQSKLAHPQHPTQMANL*SLHQTCHYAN*NQRTEGTYMYFRQICRSLTL*SEPPLEH*YFDMGQKITRQNQKCHLQTDTHQVCLSSLLQHNQESMA*CTSQRGWVC  7312

Range 8: 6348 to 6605 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
174.3 bits(374) 0.0 83/86(97%) 0/86(0%) Plus/Minus
Query      900  VDKALTKLFIIITTRQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISR  1157
                VDKALTKLFIIIT  QTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISI NSPSL*A*DTSIA*LSMQFSRLPISR
Subject   6348  VDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIANSPSL*A*DTSIA*LSMQFSRLPISR  6605

Range 9: 6611 to 7057 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
291.6 bits(630) 0.0 141/149(95%) 0/149(0%) Minus/Plus
Query      448  SLWVFIACSDFQLLFIAFLXXXXXXX*ENLSLRTRAS*PLRPAFPTLPTSLEGTSSHTPLAVL*KGG*TYLMSICL*VTFLVLTCYFLTHIKMSVFQGRLTS*SQRPADLAKIHVSTFCPLVLICIVTGLMK*LQVRHLSWMLRVC*FA  894
                SLWVFIACSDFQLLFIAFLVVVKVV**ENLSLRTR S*PLRPAF T PTSL GTSSHT L VL*KG *TYLMSICL*VTFLVLTCYFLTHIK+SVFQGRLTS*SQRPADLAKIHVSTFCPLVLICIVTGLMK*LQVRHLSWMLRVC*FA
Subject   6611  SLWVFIACSDFQLLFIAFLVVVKVV**ENLSLRTRIS*PLRPAFLTHPTSLGGTSSHTLLVVL*KGR*TYLMSICL*VTFLVLTCYFLTHIKISVFQGRLTS*SQRPADLAKIHVSTFCPLVLICIVTGLMK*LQVRHLSWMLRVC*FA  7057

Range 10: 6347 to 6571 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
161.9 bits(347) 0.0 71/75(95%) 0/75(0%) Minus/Plus
Query      934  LVKWVTWRTALITMQLRYPMPTGWASCQLK**MKRKLKHTTTVCGS*LEISTR*GAQFPGCLKL*IRP*VFGVL*  1158
                LVKWVTWRTALITMQLRYPMPTGWAS QLK**MKRKLKHTTTVCGS*LEISTR*GAQF GCLKL*IRP*VFG++*
Subject   6347  LVKWVTWRTALITMQLRYPMPTGWASWQLK**MKRKLKHTTTVCGS*LEISTR*GAQFLGCLKL*IRP*VFGMV*  6571

Range 11: 7103 to 7294 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
146.8 bits(314) 0.0 62/64(97%) 0/64(0%) Minus/Plus
Query      211  SNFLVRYEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIERS*SSCSEMPFQQPANWAKTITPLT  402
                SNFLVR EVLHLMLLPY*NQGIRPPMISTGSTLLQQDIER+*SSCSEMPFQQPANWAKTITPLT
Subject   7103  SNFLVRCEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIERN*SSCSEMPFQQPANWAKTITPLT  7294

Range 12: 7158 to 7349 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
93.6 bits(198) 0.0 38/64(59%) 0/64(0%) Minus/Minus
Query        6  LANMTYLRKAAPTQCPTPTTMGG*FWPKSPAAEKAIHCMMIHTYLCPVAPM*NHDISSDVGSPD  197
                +AN+T+L  AAP+QCP  ++ G *FWP S  AEKA HCMMI+ +LC VA M*N  +SS+VGS D
Subject   7158  MANLTFLENAAPSQCPRQSSTG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLD  7349

Range 13: 7153 to 7344 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.7 bits(196) 0.0 41/64(64%) 0/64(0%) Minus/Minus
Query        1  KYDLLTKSSTNPMPNPNDNGGIILAQIPSC*KSNSLHDDPHLSMSCCTNVKPRHIIGRRIP*SQ  192
                K+D L K ST PMP P  NG I+LAQ   C*K  SLHDD  LSMSCC+NV+P  IIG RIP* Q
Subject   7153  KFDFLRKCSTKPMPTPIVNGVIVLAQFAGC*KGISLHDDQFLSMSCCSNVEPVLIIGGRIP*FQ  7344

Range 14: 7153 to 7347 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.3 bits(195) 0.0 42/65(65%) 0/65(0%) Plus/Plus
Query        1  LRSGDPTSDDMSWFYIGATGHR*VWIIMQ*IAFSAAGDLGQNYPPIVVGVGHWVGAAFRK*VIFA  195
                L+S DPTSDD  WFYI AT HR   IIMQ* AFSA  +LGQNY P+    GHW+GAAF K V FA
Subject   7153  LKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPVDDWRGHWLGAAFSKKVKFA  7347

Range 15: 7155 to 7346 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.3 bits(193) 0.0 37/64(58%) 0/64(0%) Plus/Plus
Query        3  EIRGSYVR*YVVVLHWCNRT*IGVDHHAVNCFFSSWGFGPKLSPHCRWGWALGWCCFS*VGHIC  194
                EI+GS +R*  +VLH CN+T*  +DHHAV C FS+   GPKLSP  R  WAL WCC  *   IC
Subject   7155  EIKGSDLR**ALVLHCCNKT*KEIDHHAVKCLFSNLRIGPKLSPR*RLAWALAWCCIF*ESQIC  7346

Range 16: 7154 to 7348 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.4 bits(191) 0.0 40/65(62%) 0/65(0%) Minus/Minus
Query        2  WQI*PTYEKQHQPNAQPQRQWGDNFGPNPQLLKKQFTA**STPIYVLLHQCKTTTYHRT*DPLIS  196
                WQI* + + QHQ NA   RQ GD+FGP  +LLK+ FTA**S   YVLL QC+T+ YHR  DPLIS
Subject   7154  WQI*LS*KMQHQANAHANRQRGDSFGPIRRLLKRHFTA**SISFYVLLQQCRTSAYHRRSDPLIS  7348

Range 17: 7154 to 7276 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.1 bits(116) 0.0 26/41(63%) 0/41(0%) Plus/Plus
Query        2  *DQGILRPMICRGFTLVQQDIDRCGSSCSELLFQQLGIWAK  124
                *+QGI  PMI  G TL+QQDI+R  SSCSE+ FQQ   WAK
Subject   7154  *NQGIRPPMISTGSTLLQQDIERN*SSCSEMPFQQPANWAK  7276

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 15

Range 1: 6349 to 7311 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
726.0 bits(1578) 0.0 301/321(94%) 0/321(0%) Minus/Plus
Query      194  REMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWRVVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGRINILDEYLSVSDISGFDVLFSDPYQNVSVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPIDDRHRHW  1156
                REMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVW   IIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIREL+TEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKG+INILDEYLSV+D S FDVLFSDPYQN+SVPREAHFIKSKTCRFG+NTCKYLLSFGF++HSDRSDEVITGSPFELDVEGVLICFGKEAV+LAAAHNSDFKLPCEVRG TFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*+AFSATCELGQN + IDDR  HW
Subject   6349  REMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHY*IIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVNDFSDFDVLFSDPYQNISVPREAHFIKSKTCRFGKNTCKYLLSFGFDVHSDRSDEVITGSPFELDVEGVLICFGKEAVNLAAAHNSDFKLPCEVRGTTFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*DAFSATCELGQNCYSIDDRLGHW  7311

Range 2: 6684 to 7310 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
433.6 bits(940) 0.0 191/209(91%) 0/209(0%) Plus/Minus
Query      195  QCLCRSSMG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLTF*YGSENNTSKPEMSLTDRYSSSMFILPFTAQPGEYGLMYLPERLGVSGTPAVKAMKLSSSVTSSLIK  821
                QC   SSM * FWPNSQVAEKA HCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNV PRTSQGSLKSELCAAAK TASLPKQISTPSTSNSNGEPVITSSDLSLC  KPKDRRYLHVF PNLQVFDFMK*ASLGTL F*YGSENNTSK E S TDRYSSSMFI PFTAQPGEYGLMYLPER GVSGTPAVKAMKLSSSV SSLIK
Subject   6684  QCPSLSSME*QFWPNSQVAEKASHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVVPRTSQGSLKSELCAAAKLTASLPKQISTPSTSNSNGEPVITSSDLSLCTSKPKDRRYLHVFLPNLQVFDFMK*ASLGTLIF*YGSENNTSKSEKSFTDRYSSSMFIFPFTAQPGEYGLMYLPERFGVSGTPAVKAMKLSSSVMSSLIK  7310

Range 3: 6347 to 6706 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
243.5 bits(525) 0.0 104/120(87%) 0/120(0%) Plus/Minus
Query      799  Q*QVLLLNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SQHAKHLRPNL*LQTTRKLSTSSCAYF*LGTAHSCSVLQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFHE  1158
                Q*  LL NYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**S +AKHLRPNL*LQT +KLS SSCAYF* GTAHSCS LQLPLHSSFQLTTRP CRHR PQLH+YQC+ PG PFHE
Subject   6347  Q**ALLSNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SNNAKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQLPLHSSFQLTTRPTCRHRTPQLHNYQCNFPGCPFHE  6706

Range 4: 6349 to 7311 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
638.4 bits(1387) 0.0 275/321(86%) 0/321(0%) Plus/Minus
Query      194  PMPMPIVNGVIVLAQFAGC*KGISLHDDQLLSMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSYLTRKFEIGIMRSR*INCLLAKAN*HTLNIQLKWRTCNHFIRPVTMQIKTKGQKVLTCIFAKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYPPFYSTARGVWLDVPSREVGSVGNAGRKGYEALVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHNTPNT*GLIYSFKQPGN*APHLVLISN*EPHTVVVCFNFLFIHHFN*QLAQPVGIGYLNCIVINAVLQVTHFT  1156
                PMP PIVNGV VLAQFAGC*KGISLHDDQLL MSCCSNVEPVLII GRI *FQ*GNNIKCSTSYLTRKFEI IMRS  +NCLLAKAN*HTLNIQLKW TCNHFIRPVTM IKTKG KVLTCIFAK AGL*LYEVSLPWNTDILIWVR+*HVK R V +RQILI+YVY PFYST R VWLDVP R+V SVGNAGR+ YE LV S++ SY TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNN   PNT*GLIYSFKQ  N*A HLVLISN EPHTVVV FNFLFIHHFN*QLAQPVGIG+LNCI+INA+ QV HFT
Subject   6349  PMPKPIVNGVTVLAQFAGC*KGISLHDDQLLPMSCCSNVEPVLIIRGRIS*FQ*GNNIKCSTSYLTRKFEI*IMRSCQVNCLLAKAN*HTLNIQLKW*TCNHFIRPVTMHIKTKG*KVLTCIFAKPAGL*LYEVSLPWNTDILIWVRE*HVKIRKVIHRQILIEYVYLPFYSTTRRVWLDVPPRKVWSVGNAGRESYETLVFSNELSYQTTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNLIMPNT*GLIYSFKQSRN*ASHLVLISNQEPHTVVVRFNFLFIHHFN*QLAQPVGIGHLNCIIINAIFQVAHFT  7311

Range 5: 6675 to 7313 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
398.3 bits(863) 0.0 178/213(84%) 0/213(0%) Minus/Plus
Query      192  *K*FNKRTCH*GRELHSLYGRRSRHSQPLWKVHQAILPWLCCKREDKHT**VSVCK*HFWF*RVIF*PISKCQCSKGGSLHKVKDLQIWRKYM*VPSVLWF*FA**QV**SDYRFAI*VGC*GCANLLWQGGS*FSGCA*FRFQTSL*GTRCYI*CCYLIEIKGSDLR**ALVLHCCNKT*KEVDHHAVKCLFSNLRIGPKLSPH*RSA*ALA  830
                *K*F+KR  +* RE HS +GRRSRHS+P W+VHQAIL WLCCKREDKHT *VSVC+* F F*RVI *PISK QCSKGGSLHKVKDLQ+W+KYM*VPS+LWF* A**QV**SDYRF I*VGC*GCANLLWQGGS*   CA*FRFQTSL*GTR YI*CCYLIEIK SDL **ALVLHCCNKT*+EVDHHAV+CLFSNLRIGPKL  H*R A ALA
Subject   6675  *K*FDKRAHY*RREFHSFHGRRSRHSKPFWEVHQAILSWLCCKREDKHTR*VSVCE*LF*F*RVIL*PISKYQCSKGGSLHKVKDLQVWQKYM*VPSILWF*CA**QV**SDYRFTI*VGC*GCANLLWQGGS*LGSCA*FRFQTSL*GTRYYI*CCYLIEIKRSDL***ALVLHCCNKT*EEVDHHAVRCLFSNLRIGPKLLLH*R*AWALA  7313

Range 6: 6348 to 6641 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
188.0 bits(404) 0.0 87/98(89%) 0/98(0%) Minus/Plus
Query      864  S*NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*STLQLCAVPS*K*AQDEVLNFRVV*SYRLGLKCLACCDYYE*LS*SFVYV*VCGCL*RAQI  1157
                S*NG PG+LH**LCN*G+LCLQ GRVVN*NDE*RGS*S LQLCAVP *K*AQDE+LNF +V*SYRLGLKCLA  DYYE*LS*SFVYV*VCGCL*RAQI
Subject   6348  S*NGQPGKLH**LCN*GVLCLQVGRVVN*NDE*RGS*SALQLCAVPG*K*AQDEMLNFWIV*SYRLGLKCLALLDYYE*LS*SFVYV*VCGCL*RAQI  6641

Range 7: 6746 to 7312 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
370.4 bits(802) 0.0 159/189(84%) 0/189(0%) Plus/Minus
Query      193  ANAYADRQWGDSFGPIRRLLKRHFTA**STSFYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLVPHKEV*NRNYAQPLNQLPPCQSKLAHPQHPTQMANL*SLHQTCHYAN*NQRTEGTYMYFRQICRSLTL*SEPPLEH*HFDMGQKITRQNQKCHLQTDTHQVCLSSLLQHSQGSMA*CTFQRGWEC  759
                ANA A RQW +SFGPIRRLLKRH TA**STS YVLLQQCRTSAYH+RSD LISIR*QHQM*+LVPHKEV*N NYAQ  + LPPCQSKLAHPQHPTQM NL*SLHQTCHYA+ NQR EGTYMYF Q CRSLTL*SEPPLEH*+FDMGQ+ITRQNQK H QTDTH+VCLSSLLQH+Q SMA*CT Q+G EC
Subject   6746  ANAQAYRQWSNSFGPIRRLLKRHLTA**STSSYVLLQQCRTSAYHQRSDLLISIR*QHQM*YLVPHKEV*NLNYAQLPS*LPPCQSKLAHPQHPTQMVNL*SLHQTCHYAHQNQRIEGTYMYFCQTCRSLTL*SEPPLEH*YFDMGQRITRQNQKSHSQTDTHRVCLSSLLQHNQESMA*CTSQKGLEC  7312

Range 8: 6348 to 6605 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
171.1 bits(367) 0.0 82/86(95%) 0/86(0%) Plus/Minus
Query      900  VDKALTKLFIIITTRQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISR  1157
                VDKALTKLFIII   QTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSP+L*A*DTSIA*LSMQFSRLPISR
Subject   6348  VDKALTKLFIII**CQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSMQFSRLPISR  6605

Range 9: 6611 to 7294 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
387.3 bits(839) 0.0 198/228(87%) 0/228(0%) Minus/Plus
Query      211  SLWVFIACSDFQLLFIAFLXXXXXXX*ENLSLRTRAS*PLRPAFPTLPTSLEGTSSHTPLAVL*KGG*TYLMSICL*VTFLVLTCYFLTHIKMSVFQGRLTS*SQRPADLAKIHVSTFCPLVLICIVTGLMK*LQVRHLSWMLRVC*FAXXXXXXXXXXXXXXISNFLVRYEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIERS*SSCSEMPFQQPANWAKTITPLT  894
                SLWVFIACSDFQLLFIAFLVVVKVV**E+  L+TR S*  RPAFPTL T L GTSSHT L VL*KG *TY MSICL*+TFL+LTCY LTHIK+SVFQGRLTS*SQRPA LAKIHVSTF PLVL+CIVTGLMK*LQV HLSWMLRVC*FALARRQL  +LRII ISNFLVRYEVLHLMLLPY*NQ IRP MISTGSTLLQQDI RS*SSCSEMPFQQPANWAKT+TPLT
Subject   6611  SLWVFIACSDFQLLFIAFLVVVKVV**ESSLLKTRVS*LSRPAFPTLQTFLGGTSSHTLLVVL*KGR*TYSMSICL*MTFLILTCYSLTHIKISVFQGRLTS*SQRPAGLAKIHVSTFYPLVLMCIVTGLMK*LQVHHLSWMLRVC*FALARRQLTWQLRIIQISNFLVRYEVLHLMLLPY*NQEIRPLMISTGSTLLQQDIGRS*SSCSEMPFQQPANWAKTVTPLT  7294

Range 10: 6347 to 6568 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
142.7 bits(305) 0.0 62/74(84%) 0/74(0%) Minus/Plus
Query      937  LVKWVTWRTALITMQLRYPMPTGWASCQLK**MKRKLKHTTTVCGS*LEISTR*GAQFPGCLKL*IRP*VFGVL  1158
                LVKW TW+ ALI MQLR PMPTGWASCQLK**MKRKLK TTTVCGS LEISTR* AQF  CLKL*IRP*VFG++
Subject   6347  LVKWATWKIALIIMQLRCPMPTGWASCQLK**MKRKLKRTTTVCGSWLEISTR*DAQFLDCLKL*IRP*VFGII  6568

Range 11: 7158 to 7346 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
87.7 bits(185) 0.0 37/63(59%) 0/63(0%) Minus/Minus
Query        6  ANMTYLRKAAPTQCPTPTTMGG*FWPKSPAAEKAIHCMMIHTYLCPVAPM*NHDISSDVGSPD  194
                AN+T+L  AAP+QCP+ ++M   FWP S  AEKA HCMMI+ +LC VA M*N  +SS+VGS D
Subject   7158  ANLTFLGNAAPSQCPSLSSME*QFWPNSQVAEKASHCMMINFFLCLVAAM*NQCLSSEVGSLD  7346

Range 12: 7153 to 7347 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
85.8 bits(181) 0.0 41/65(63%) 0/65(0%) Plus/Plus
Query        1  LRSGDPTSDDMSWFYIGATGHR*VWIIMQ*IAFSAAGDLGQNYPPIVVGVGHWVGAAFRK*VIFA  195
                L+S DPTSDD  WFYI AT HR   IIMQ* AFSA  +LGQN   I   +GHW+GAAF K V FA
Subject   7153  LKSRDPTSDDKHWFYIAATRHRKKLIIMQ*DAFSATCELGQNCYSIDDRLGHWLGAAFPKKVKFA  7347

Range 13: 7154 to 7345 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.1 bits(175) 0.0 38/64(59%) 0/64(0%) Minus/Minus
Query        2  QI*PTYEKQHQPNAQPQRQWGDNFGPNPQLLKKQFTA**STPIYVLLHQCKTTTYHRT*DPLIS  193
                QI* + E QHQ NAQ  RQW ++FGP  +LLK+  TA**ST  YVLL QC+T+ YH+  D LIS
Subject   7154  QI*LS*EMQHQANAQAYRQWSNSFGPIRRLLKRHLTA**STSSYVLLQQCRTSAYHQRSDLLIS  7345

Range 14: 7155 to 7349 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.6 bits(174) 0.0 36/65(55%) 0/65(0%) Plus/Plus
Query        3  EIRGSYVR*YVVVLHWCNRT*IGVDHHAVNCFFSSWGFGPKLSPHCRWGWALGWCCFS*VGHICQ  197
                EI+ S + *  +VLH CN+T*  VDHHAV C FS+   GPKL  H R  WAL WCC S*   IC+
Subject   7155  EIKRSDL***ALVLHCCNKT*EEVDHHAVRCLFSNLRIGPKLLLH*R*AWALAWCCIS*ESQICR  7349

Range 15: 7153 to 7344 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.9 bits(168) 0.0 37/64(58%) 0/64(0%) Minus/Minus
Query        1  KYDLLTKSSTNPMPNPNDNGGIILAQIPSC*KSNSLHDDPHLSMSCCTNVKPRHIIGRRIP*SQ  192
                K+D L K ST PMP P  NG  +LAQ   C*K  SLHDD  L MSCC+NV+P  II  RI * Q
Subject   7153  KFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDDQLLPMSCCSNVEPVLIIRGRIS*FQ  7344

Grapevine rupestris stem pitting associated virus isolate GRSPaV LSL, complete genome

Sequence ID: KR054735.1 Length: 8754 Number of Matches: 18

Range 1: 6349 to 7311 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
671.9 bits(1460) 0.0 271/321(84%) 0/321(0%) Minus/Plus
Query      194  REMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWRVVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGRINILDEYLSVSDISGFDVLFSDPYQNVSVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPIDDRHRHW  1156
                REMGNLENCIDNYAIEVSYAY+LGELS+E+M+EEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALS+W  V IMNNLVKALS FEFVGV+SVL+FPVVVHSVPGSGKSSLIREL+ EDE+F+AFTAGVPD+PNL+G+YIKP+SPGCAV G+INILDEYLS+ D SGFDVLFSDPYQNVS+PREAHFIKSKTCRFGENTCKYLLSFGF + SDRSD V+ GSPFELDVEGVLICFGKEAVDLA +HNSDFKLPCEVRG+TFDVVTLLKSRDPT DD+HWFYIAATRH KKLI+MQ*+AF A C+LGQNY+P  +   +W
Subject   6349  REMGNLENCIDNYAIEVSYAYKLGELSMEVMSEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWLGVSIMNNLVKALSEFEFVGVFSVLKFPVVVHSVPGSGKSSLIRELIAEDENFVAFTAGVPDSPNLTGKYIKPFSPGCAVPGKINILDEYLSIQDFSGFDVLFSDPYQNVSIPREAHFIKSKTCRFGENTCKYLLSFGFKVCSDRSDSVVIGSPFELDVEGVLICFGKEAVDLAVSHNSDFKLPCEVRGSTFDVVTLLKSRDPTPDDRHWFYIAATRHTKKLIVMQ*DAFPAACKLGQNYNPTHNWSGYW  7311

Range 2: 6684 to 7289 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
357.1 bits(773) 0.0 157/202(78%) 0/202(0%) Plus/Minus
Query      216  MG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLTF*YGSENNTSKPEMSLTDRYSSSMFILPFTAQPGEYGLMYLPERLGVSGTPAVKAMKLSSSVTSSLIK  821
                +G *FWPN Q A KA HC+ INFF+CLVAAM*NQCLSS VGSLDFNKVTTSNV P TSQGSLKSELC  A+STAS PKQISTPSTSNSNG+P+ T SDLSL  LKPKD+RYL VFSPNLQVFDFMK ASLG LTF*YGSEN+TSKPE S  DRYSS +FILP TA PGE G MY P + G+SGTPAVKA K SSS  SSLIK
Subject   6684  VGL*FWPNLQAAGKASHCITINFFVCLVAAM*NQCLSSGVGSLDFNKVTTSNVEPLTSQGSLKSELCETARSTASFPKQISTPSTSNSNGDPITTLSDLSLQTLKPKDKRYLQVFSPNLQVFDFMKCASLGMLTF*YGSENSTSKPEKS*MDRYSSKIFILPGTAHPGEKGFMYFPVKFGLSGTPAVKATKFSSSAISSLIK  7289

Range 3: 6351 to 6602 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
150.4 bits(322) 0.0 72/84(86%) 0/84(0%) Plus/Minus
Query      903  DKALTKLFIIITTRQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPIS  1154
                DKALTKLFII+T  Q LKA*SIASN PE+EHLILCLFLT+NRTQL* ASTSSS I SID+SPSL*A*DTSIA*LS+QFSRLPIS
Subject   6351  DKALTKLFIILTPSQILKA*SIASNKPEMEHLILCLFLTKNRTQL**ASTSSSLITSIDSSPSL*A*DTSIA*LSIQFSRLPIS  6602

Range 4: 6811 to 7311 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
217.3 bits(468) 0.0 93/167(56%) 0/167(0%) Plus/Minus
Query      194  PMPMPIVNGVIVLAQFAGC*KGISLHDDQLLSMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSYLTRKFEIGIMRSR*INCLLAKAN*HTLNIQLKWRTCNHFIRPVTMQIKTKGQKVLTCIFAKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVY  694
                P+P PIV+GVIVLAQF GC KGISLH+DQLL +SCCS+VEP+ ++GG +P* Q  +N+KC T +  R+FEI I+R+R I+CL +KA+*HTL+I LKW   N  IRP+T   + K QK+L  + +K AG *LYE+ LP N DILIW+ K HVKT  +    I I+ +Y
Subject   6811  PIPRPIVSGVIVLAQFTGCWKGISLHNDQLLCVSCCSDVEPMPVVGGWVP*LQQSDNVKC*TPHFARQFEIRIVRNRQIHCLFSKAD*HTLDI*LKW*PYNDTIRPITANFEAKRQKILASVLSKPAGF*LYEMCLPRNADILIWI*KQHVKT*EILNG*IFIQNIY  7311

Range 5: 6349 to 6756 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
161.9 bits(347) 0.0 72/136(53%) 0/136(0%) Plus/Minus
Query      749  VGSVGNAGRKGYEALVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHNTPNT*GLIYSFKQPGN*APHLVLISN*EPHTVVVCFNFLFIHHFN*QLAQPVGIGYLNCIVINAVLQVTHFT  1156
                + +V N   + ++ LVL +KFSY  TF TTRN + NN K +H  +T+KLK  QSFN*+IHN H  PNT*GLI  FKQ  + A H VLI N EP+T+V+ F+ L  H+F+  L   VGI YLNCI+IN +LQ+THF+
Subject   6349  IWTVWNTCSESHKILVLGNKFSYQATFATTRNTVYNNRKFKHTEHTNKLKF*QSFN*IIHNTHTKPNT*GLINRFKQTRDGASHFVLIPNQEPNTIVMSFHLLLTHYFHR*LT*FVGIRYLNCIIINTILQITHFS  6756

Range 6: 6746 to 7309 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
163.3 bits(350) 0.0 89/188(47%) 0/188(0%) Plus/Minus
Query      196  NAYADRQWGDSFGPIRRLLKRHFTA**STSFYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLVPHKEV*NRNYAQPLNQLPPCQSKLAHPQHPTQMANL*SLHQTCHYAN*NQRTEGTYMYFRQICRSLTL*SEPPLEH*HFDMGQKITRQNQKCHLQTDTHQVCLSSLLQHSQGSMA*CTFQRGWEC  759
                N   + +WG SFGPI RLL+RH TA* STS  VLLQ+CRT+A  R   PL S +*Q QM +    K V*N+N A+P + LP  QS+LAHP+H TQM  L*  + T H   *+Q+T+ T     Q CR LTL*+ PP E *HFDM  K  RQN +     D H   LS L          CT     +C
Subject   6746  NTQTNCEWGYSFGPIYRLLERHLTA*RSTSLCVLLQRCRTNACRRGLGPLTSTK*QRQMLNPSLRKAV*NQNCAKPPDPLPLFQSRLAHPRHLTQMVTL*RHYPTYHCKL*SQKTKDTCKCSLQTCRFLTL*NVPPSEC*HFDMDLKTARQNLRNLEWIDIHPKYLSYLALRILEKRVLCTSLLNLDC  7309

Range 7: 6353 to 6697 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
135.8 bits(290) 0.0 65/115(57%) 0/115(0%) Plus/Minus
Query      808  VLLLNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SQHAKHLRPNL*LQTTRKLSTSSCAYF*LGTAHSCSVLQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPF  1152
                VLL +YF HYQE   QQ EI*A   H QTQ  TKL*L+YS* S  AK+LRPN  LQT ++ S S CAY *  T H+C+ L  P HS         CRH+IPQLH+YQ +SP YPF
Subject   6353  VLLSSYFCHYQEHCVQQQEI*AH*THQQTQILTKL*LNYS*YSHQAKYLRPNQSLQTNQRWSISFCAYS*PRTEHNCNELPPPPHSLLP*IAHLVCRHKIPQLHNYQYNSPDYPF  6697

Range 8: 7011 to 7289 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
113.8 bits(242) 0.0 55/93(59%) 0/93(0%) Minus/Plus
Query      216  YRFAI*VGC*GCANLLWQGGS*FSGCA*FRFQTSL*GTRCYI*CCYLIEIKGSDLR**ALVLHCCNKT*KEVDHHAVKCLFSNLRIGPKLSPH  494
                YR  I*V C GCANLLW+ GS   G A F FQT+L      I* C+ +E+KG + R  ALVLH CNKT KEVD +AV+CL S+L IGPKL PH
Subject   7011  YRVTI*VRCRGCANLLWKRGSGSGGFAQF*FQTALRSEGFNI*RCHFVEVKGPNPRRQALVLHRCNKTHKEVDRYAVRCLSSSL*IGPKL*PH  7289

Range 9: 6354 to 6626 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
107.8 bits(229) 0.0 56/91(62%) 0/91(0%) Minus/Plus
Query      879  NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*STLQLCAVPS*K*AQDEVLNFRVV*SYRLGLKCLACCDYYE*LS*SFVYV*VCGCL  1151
                NG* GEL+**LCN*GILCLQ    +  ++E* G  S+LQLC+V  *+*AQ+E+L+   V*S  LGLK LA C+YYE* S*SFV +*VC C+
Subject   6354  NG*SGELY**LCN*GILCLQTR*AIYGSNE*GGGGSSLQLCSVLG*E*AQNEMLHLWFV*SD*LGLKYLAWCEYYE*FS*SFVRI*VCWCV  6626

Range 10: 6678 to 6974 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.6 bits(174) 0.0 42/99(42%) 0/99(0%) Minus/Plus
Query      531  K*FNKRTCH*GRELHSLYGRRSRHSQPLWKVHQAILPWLCCKREDKHT**VSVCK*HFWF*RVIF*PISKCQCSKGGSLHKVKDLQIWRKYM*VPSVLW  827
                K* +KRT   GRE    + R SR S+   +VH+ +   +   R DK+  *+S+      F*R +F  ISKCQ S+GG+ HKVK+LQ+WR+++ V  V W
Subject   6678  K*LDKRTYCRGREFCGFHCRCSRQSKFNREVHKTLFSRMRSAR*DKYFG*ISIHSRFLRF*RAVFRSISKCQHSEGGTFHKVKNLQVWREHLQVSFVFW  6974

Range 11: 6854 to 7294 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
148.6 bits(318) 0.0 86/147(59%) 0/147(0%) Minus/Plus
Query      211  VLTCYFLTHIKMSVFQGRLTS*SQRPADLAKIHVSTFCPLVLICIVTGLMK*LQVRHLSWMLRVC*FAXXXXXXXXXXXXXXISNFLVRYEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIERS*SSCSEMPFQQPANWAKTITPLT  651
                VLTC F  HIKMS F+GR  S*SQ+PA L +   S FC L     V G +  L   HLS M RVC* AL +RQ I R R I ISN L +  V HL L   *+QG +PP    GST LQQD +RS*S CSEMPFQQP NWAKTITPLT
Subject   6854  VLTCCFQIHIKMSAFRGRHIS*SQKPAGLERTLASIFCLLASKFAVIGRIVSL*GHHLS*MSRVC*SALEKRQWIWRFRTILISNCLAK*GVQHLTLSLC*SQGTQPPTTGIGSTSLQQDTQRS*SLCSEMPFQQPVNWAKTITPLT  7294

Range 12: 6347 to 6571 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.5 bits(165) 0.0 43/75(57%) 0/75(0%) Minus/Plus
Query      934  LVKWVTWRTALITMQLRYPMPTGWASCQLK**MKRKLKHTTTVCGS*LEISTR*GAQFPGCLKL*IRP*VFGVL*  1158
                L KWV WR  LI MQLRY MPT   S   K**++R+ K  T V GS L IST+* A    CLK  IRP*VFG++*
Subject   6347  LEKWVIWRIVLIIMQLRYLMPTN*VSYLWK**VRRRWKLITIVFGSWLGISTK*DAPSLVCLKRLIRP*VFGLV*  6571

Range 13: 6611 to 6715 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.4 bits(49) 0.0 21/35(60%) 0/35(0%) Minus/Plus
Query      790  SLWVFIACSDFQLLFIAFLXXXXXXX*ENLSLRTR  894
                SL V   C +F LL+  FLVV KV **ENL  RTR
Subject   6611  SLLVCSVCLNFLLLYTVFLVVAKVA**ENLLPRTR  6715

Range 14: 7153 to 7344 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.1 bits(151) 0.0 30/64(47%) 0/64(0%) Minus/Minus
Query        1  KYDLLTKSSTNPMPNPNDNGGIILAQIPSC*KSNSLHDDPHLSMSCCTNVKPRHIIGRRIP*SQ  192
                K+DLL K +T P+P P  +G I+LAQ   C K  SLH+D  L +SCC++V+P  ++G  +P* Q
Subject   7153  KFDLLRK*NTRPIPRPIVSGVIVLAQFTGCWKGISLHNDQLLCVSCCSDVEPMPVVGGWVP*LQ  7344

Range 15: 7153 to 7347 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.6 bits(150) 0.0 34/65(52%) 0/65(0%) Plus/Plus
Query        1  LRSGDPTSDDMSWFYIGATGHR*VWIIMQ*IAFSAAGDLGQNYPPIVVGVGHWVGAAFRK*VIFA  195
                L+S DPT DD  WFYI AT H    I+MQ* AF AA  LGQNY P     G+W   +F + V FA
Subject   7153  LKSRDPTPDDRHWFYIAATRHTKKLIVMQ*DAFPAACKLGQNYNPTHNWSGYWSSVSFSEKVKFA  7347

Range 16: 7154 to 7354 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
65.2 bits(136) 0.0 30/67(45%) 0/67(0%) Minus/Minus
Query        2  RHWQI*PTYEKQHQPNAQPQRQWGDNFGPNPQLLKKQFTA**STPIYVLLHQCKTTTYHRT*DPLIS  202
                R WQI*P+ + +H  N Q   +WG +FGP  +LL++  TA* ST + VLL +C+T    R   PL S
Subject   7154  RIWQI*PSQKMKH*TNTQTNCEWGYSFGPIYRLLERHLTA*RSTSLCVLLQRCRTNACRRGLGPLTS  7354

Range 17: 7155 to 7355 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.0 bits(129) 0.0 30/67(45%) 0/67(0%) Plus/Plus
Query        3  EIRGSYVR*YVVVLHWCNRT*IGVDHHAVNCFFSSWGFGPKLSPHCRWGWALGWCCFS*VGHICQCL  203
                E++G   R   +VLH CN+T   VD +AV C  SS   GPKL PH +  W L  C   * G IC  L
Subject   7155  EVKGPNPRRQALVLHRCNKTHKEVDRYAVRCLSSSL*IGPKL*PHSQLVWVLV*CFIF*EGQICHIL  7355

Range 18: 7158 to 7349 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.6 bits(128) 0.0 29/64(45%) 0/64(0%) Minus/Minus
Query        6  LANMTYLRKAAPTQCPTPTTMGG*FWPKSPAAEKAIHCMMIHTYLCPVAPM*NHDISSDVGSPD  197
                +AN+T+       Q P    +G *FWP   AA KA HC+ I+ ++C VA M*N  +SS VGS D
Subject   7158  MANLTFSENETLDQYPDQL*VGL*FWPNLQAAGKASHCITINFFVCLVAAM*NQCLSSGVGSLD  7349

Grapevine Rupestris stem pitting associated virus, complete genome

Sequence ID: AF026278.1 Length: 8725 Number of Matches: 17

Range 1: 6349 to 7311 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
668.7 bits(1453) 0.0 271/321(84%) 0/321(0%) Minus/Plus
Query      194  REMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWRVVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGRINILDEYLSVSDISGFDVLFSDPYQNVSVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPIDDRHRHW  1156
                REMGNLENCIDNYAIEVSYAYRLGELSIEMM EEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALS+W  + IMNNLVKALSTFEFVGV+SVL+FPVV+HSVPGSGKSSLIREL++EDE+FIAFTAGVPD+PNL+GRYIKPYSPGCAV G++NILDEYLSV D SGFDVLFSDPYQN+S+P+EAHFIKSKTCRFG NTCKYL SFGF + SD  D+VI GSPF LDVEGVLICFGKEAVDLA AHNS+FKLPCEVRG+TF+VVTLLKSRDPT +D+HWFYIAATRHR+KLIIMQ*+AFSA CELG+N++ ID    HW
Subject   6349  REMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHYLSIMNNLVKALSTFEFVGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDKVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWLGHW  7311

Range 2: 6684 to 7310 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
329.1 bits(712) 0.0 150/209(72%) 0/209(0%) Plus/Minus
Query      195  QCLCRSSMG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLTF*YGSENNTSKPEMSLTDRYSSSMFILPFTAQPGEYGLMYLPERLGVSGTPAVKAMKLSSSVTSSLIK  821
                QC  + SM   F PNSQ AEKA +CM+INF LCLVAAM*NQCLSS VGSLDF +VTT  V P TSQG+L SELCA A+STASLPK ISTPSTS+  G+P +T S  SL  LKPK+ RYL VF+PNLQVFD MK ASLG L F YGSEN+TSKPE S TD+YSSSMF  P TA PGE GLMYLP RLG+SGTPAVKAMK SSS  SSLIK
Subject   6684  QCPSQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSELCATARSTASLPKHISTPSTSSVKGDPTMTLSKPSLLTLKPKEERYLQVFTPNLQVFDLMKCASLGMLMFWYGSENSTSKPEKSWTDKYSSSMFTFPGTAHPGE*GLMYLPVRLGLSGTPAVKAMKFSSSEISSLIK  7310

Range 3: 6351 to 6605 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
137.6 bits(294) 0.0 68/85(80%) 0/85(0%) Plus/Minus
Query      900  VDKALTKLFIIITTRQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPIS  1154
                VD ALTKLFII+   Q LKA*SIASN PEIEHLILCLFLT+N TQL* ASTSSS IIS+D+SPS  A*+TSIA*LS+QFSRLPIS
Subject   6351  VDNALTKLFIILK*CQILKA*SIASNRPEIEHLILCLFLTKNLTQL*WASTSSSVIISMDSSPSRYA*ETSIA*LSIQFSRLPIS  6605

Range 4: 6355 to 7311 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
345.2 bits(747) 0.0 164/319(51%) 0/319(0%) Plus/Minus
Query      194  PMPMPIVNGVIVLAQFAGC*KGISLHDDQLLSMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSYLTRKFEIGIMRSR*INCLLAKAN*HTLNIQLKWRTCNHFIRPVTMQIKTKGQKVLTCIFAKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYPPFYSTARGVWLDVPSREVGSVGNAGRKGYEALVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHNTPNT*GLIYSFKQPGN*APHLVLISN*EPHTVVVCFNFLFIHHFN*QLAQPVGIGYLNCIVINAVLQVTH  1150
                PMP P VNGV+V AQFAGC*KGI LHD Q L +SC SNV+PV I+ G I *FQ   ++K  TS  TR FE  ++R+  I+CLLAKA *H  NIQ K R  N F++ VT  +KT+G K+   I AK    *L E+ L  N D+L+WVR+ H+KT  +   Q+LIKYV+ P + T   + L+VPS E+ +V N   + YE L+L +   Y*TTFTTTR+ MN+ WK +H  NT+KLK  Q FN*+IHN    PNT*GLI  FK   N*A HL+L+ + E +T+++  +F   HHFN  L+QPV IG L  I++N +LQVTH
Subject   6355  PMPKPTVNGVMVFAQFAGC*KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVVRNGEIHCLLAKAY*HPFNIQCKRRPHNDFVQTVTANLKTEGGKIFASIHAKPTSF*LDEMCLFRNADVLVWVREQHIKT*KILDGQVLIKYVHFPRHCTPWRIRLNVPSCEIRAVWNTCCESYEILILGN*LPY*TTFTTTRHTMNDYWKFKHTENTYKLKC*QCFN*IIHNTQIMPNT*GLINRFK*A*N*ASHLMLVPDQESNTIIMGLHFFLGHHFNG*LSQPVRIGDLYRIIVNTILQVTH  7311

Range 5: 6707 to 7294 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
155.0 bits(332) 0.0 102/196(52%) 0/196(0%) Minus/Plus
Query      211  RTRAS*PLRPAFPTLPTSLEGTSSHTPLAVL*KGG*TYLMSICL*VTFLVLTCYFLTHIKMSVFQGRLTS*SQRPADLAKIHVSTFCPLVLICIVTGLMK*LQVRHLSWMLRVC*FAXXXXXXXXXXXXXXISNFLVRYEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIERS*SSCSEMPFQQPANWAKTITPLT  798
                R R S*  +  F T   S EGT S     V  +G *TYLMS C    F VL C   TH K S F  R  S SQ+   LA I  + F P VL   VT   K L  R L WML+ C*+ALARRQ I  LR    SN+LV+ EV  L    +*NQ I+P  I TG TLL QD  R+* SCS+MPFQQPANWAKTITPLT
Subject   6707  RMRIS*LSQQVFQTALISQEGTLSLILQGVQCRGK*TYLMSTCPSKIFQVLMCCSRTHTKTSAFLKRHISSSQKLVGLA*ILANIFPPSVLRLAVTVWTKSLWGRLLHWMLKGC*YALARRQWISPLRTTLNSNYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQQPANWAKTITPLT  7294

Range 6: 6354 to 6623 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
93.6 bits(198) 0.0 49/90(54%) 0/90(0%) Minus/Plus
Query      882  NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*STLQLCAVPS*K*AQDEVLNFRVV*SYRLGLKCLACCDYYE*LS*SFVYV*VCGC  1151
                +G*PGEL+* LC+ G+LC+ AGR ++*ND+   S   L LC +   + A DE+LNFR +*S  LGLK LA  +YYE* S*S V +*VC C
Subject   6354  DG*PGELY*QLCDRGLLCVPAGRAIH*NDDRGRSGGPL*LC*ILGQEQA*DEMLNFRPI*SD*LGLKYLALFEYYE*FS*SIVNI*VCRC  6623

Range 7: 6356 to 6691 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
110.6 bits(235) 0.0 62/112(55%) 0/112(0%) Plus/Minus
Query      814  LLNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SQHAKHLRPNL*LQTTRKLSTSSCAYF*LGTAHSCSVLQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYP  1149
                LLNYFYHYQ  YE  LEI*A  KH QTQ  T L*L+YS* S +AK+LRPN  LQ   KLS SS A  *    H+ +   L   SSFQ    PA  HR P  H+ Q +SPGYP
Subject   6356  LLNYFYHYQAHYE*LLEI*AH*KHLQTQMLTML*LNYS*YSNNAKYLRPNQSLQIGLKLSISSYACS*PRI*HNYNGPPLLPRSSFQWIALPAGTHRRPLSHNCQYNSPGYP  6691

Range 8: 6764 to 7117 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.0 bits(164) 0.0 50/118(42%) 0/118(0%) Plus/Minus
Query      388  HKEV*NRNYAQPLNQLPPCQSKLAHPQHPTQMANL*SLHQTCHYAN*NQRTEGTYMYFRQICRSLTL*SEPPLEH*HFDMGQKITRQNQKCHLQTDTHQVCLSSLLQHSQGSMA*CTF  741
                HK +* ++ AQ  + LPPCQS LA  QHP   A    L    H   *N+R +    Y RQ  + LT *+ P  E * F MG +   QN K   +T THQVC  S   H+  + A*CTF
Subject   6764  HKVI*IQSCAQRRDPLPPCQSILAPLQHPV*KATPQ*LCPNRHC*P*NRRRKDICKYSRQTYKFLT**NVPL*EC*CFGMGPRTAHQNLKNLGRTSTHQVCSLSPALHTLENKA*CTF  7117

Range 9: 7154 to 7309 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.8 bits(133) 0.0 33/52(63%) 0/52(0%) Plus/Minus
Query      196  NAYADRQWGDSFGPIRRLLKRHFTA**STSFYVLLQQCRTSAYHRRSDPLIS  351
                NA A+ QW   F PIRRLLKRH TA* S S  VL QQC+TSAY    D LIS
Subject   7154  NAQANCQWSYGFCPIRRLLKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLIS  7309

Range 10: 7032 to 7310 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
94.1 bits(199) 0.0 52/93(56%) 0/93(0%) Minus/Plus
Query      195  GC*GCANLLWQGGS*FSGCA*FRFQTSL*GTRCYI*CCYLIEIKGSDLR**ALVLHCCNKT*KEVDHHAVKCLFSNLRIGPKLSPH*RSA*AL  473
                GC*  AN+LWQGGS    CA    Q +L*  R   *     EIK S+ R *ALVLHCC KT  E+D+HAV+CLFS+LRIG K   H*+ A AL
Subject   7032  GC*RGANMLWQGGSGSRRCAQL*IQITL*S*RFNF*RRNSFEIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFSSLRIGQKP*LH*QLAWAL  7310

Range 11: 6675 to 6980 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.1 bits(151) 0.0 44/102(43%) 0/102(0%) Minus/Plus
Query      525  *K*FNKRTCH*GRELHSLYGRRSRHSQPLWKVHQAILPWLCCKREDKHT**VSVCK*HFWF*RVIF*PISKCQCSKGGSLHKVKDLQIWRKYM*VPSVLWF*  830
                *K*FNK     G E HS + R SR      KVH A+   +C   E +HT**V V    F F*  +  PI K Q S  G+ H+VK+L +WR+Y+ +  +L F*
Subject   6675  *K*FNKGANFRG*EFHSFHSRCSRQP*SHRKVH*ALFSRVCSAGESEHT**VLVRPRFFRF*CAVLGPIPKHQHS*RGTFHQVKNL*VWREYLQISFLLRF*  6980

Range 12: 6347 to 6571 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.2 bits(149) 0.0 38/75(51%) 0/75(0%) Minus/Plus
Query      934  LVKWVTWRTALITMQLRYPMPTGWASCQLK**MKRKLKHTTTVCGS*LEISTR*GAQFPGCLKL*IRP*VFGVL*  1158
                L +WVTWR  L  M+ R PM TGW S  LK** ++K +    V  S    S R* AQF   LK  IRP*VFG++*
Subject   6347  LGRWVTWRIVLTIMR*RSPMRTGWESYPLK**PRKKWRPIIIVLDSWSGTSIR*DAQFQAYLKRLIRP*VFGII*  6571

Range 13: 7153 to 7326 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.3 bits(158) 0.0 34/58(59%) 0/58(0%) Plus/Plus
Query        1  LRSGDPTSDDMSWFYIGATGHR*VWIIMQ*IAFSAAGDLGQNYPPIVVGVGHWVGAAF  174
                L+S DPT +D  WFYI AT HR   IIMQ* AFSAA +LG+N+  I   +GHW  AAF
Subject   7153  LKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWLGHWACAAF  7326

Range 14: 7177 to 7344 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
64.8 bits(135) 0.0 27/56(48%) 0/56(0%) Minus/Minus
Query       25  KYDLLTKSSTNPMPNPNDNGGIILAQIPSC*KSNSLHDDPHLSMSCCTNVKPRHII  192
                ++D L K ST+PMP P  NG ++ AQ   C*K   LHD   L +SC +NVKP  I+
Subject   7177  RFDFLRKCSTSPMPKPTVNGVMVFAQFAGC*KGILLHDYQFLPVSCSSNVKPVPIL  7344

Range 15: 7158 to 7343 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.0 bits(129) 0.0 31/62(50%) 0/62(0%) Minus/Minus
Query        6  NMTYLRKAAPTQCPTPTTMGG*FWPKSPAAEKAIHCMMIHTYLCPVAPM*NHDISSDVGSPD  191
                ++T    AA  QCP+  +M   F P S AAEKA +CM+I+  LC VA M*N  +SS VGS D
Subject   7158  DLTSSGNAAQAQCPSQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLD  7343

Range 16: 7155 to 7343 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.9 bits(120) 0.0 29/63(46%) 0/63(0%) Plus/Plus
Query        3  EIRGSYVR*YVVVLHWCNRT*IGVDHHAVNCFFSSWGFGPKLSPHCRWGWALGWCCFS*VGHI  191
                EI+ S  R   +VLH C +T   +D+HAV C FSS   G K   H +  WALG CC S*   I
Subject   7155  EIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFSSLRIGQKP*LH*QLAWALGLCCIS*GSQI  7343

Range 17: 7154 to 7327 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.1 bits(114) 0.0 29/58(50%) 0/58(0%) Minus/Minus
Query        2  EKQHQPNAQPQRQWGDNFGPNPQLLKKQFTA**STPIYVLLHQCKTTTYHRT*DPLIS  175
                E QH+PNAQ   QW   F P  +LLK+  TA* S    VL  QCKT+ Y    D LIS
Subject   7154  EMQHKPNAQANCQWSYGFCPIRRLLKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLIS  7327

Nucleotide Sequence (405 letters)

Query ID:ds2016-58_48
Query definition:No definition line
Query length:589
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 13 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
41
82
123
164
205
246
287
328
369
405

Descriptions

Alignments

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 6

Range 1: 3271 to 3672 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
328.7 bits(711) 0.0 132/134(99%) 0/134(0%) Plus/Plus
Query        3  FPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDSALSGPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYL  404
                FPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVD ALS PTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYL
Subject   3271  FPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDPALSNPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYL  3672

Range 2: 3270 to 3671 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
264.1 bits(570) 0.0 127/134(95%) 0/134(0%) Minus/Minus
Query        2  K*LSTSTSRLPSADAMAVIMQPLRGAQG*K*FDFKHKIPHRGHSFSPNFQLTSYSGVIMISLTWCLTQNKXXXXXXXXXXSPSCFRMVGPERAESTGDSLSTNDLIPAFKAKPSVLRRKPTECQKQLPSPGTGK  403
                K*LSTSTSRLPSADA+AVIMQPLRGAQG*K* DFKHKIPHRGHSFSPNFQLTSYSGVIMISLT CLTQNKAIISFSA*AFSPSCFR+VG ERA STGDSLSTNDLIPAFKA+PSVLRRKPTECQKQLPSPGTGK
Subject   3270  K*LSTSTSRLPSADAIAVIMQPLRGAQG*K*LDFKHKIPHRGHSFSPNFQLTSYSGVIMISLT*CLTQNKAIISFSA*AFSPSCFRIVGFERAGSTGDSLSTNDLIPAFKARPSVLRRKPTECQKQLPSPGTGK  3671

Range 3: 3271 to 3672 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
257.2 bits(555) 0.0 110/134(82%) 0/134(0%) Minus/Minus
Query        3  *VIEHVYLTPSKC*CNGCNHAAIKRGTRLKMI*LQTQNST*RPLIFPKFPAHLIFWCYNDQSHMVPNAE*GNHFIFCISIFTKLLPYGWARKS*INW*FAFHERSYSCLQSQTVGAEKKAN*VPKAVTITRHRK  404
                *VIEHVYLTPSKC*CN CNHAAIKRGTRLKMI L TQNST*RP I PK PAH IFW YNDQSHM+PN E*GNHFIFCISIFTKLLPY W  KS IN *F FH+R YS LQS T+ A+KK N*VPKAVTITRHRK
Subject   3271  *VIEHVYLTPSKC*CNSCNHAAIKRGTRLKMIGL*TQNST*RPFILPKLPAHFIFWRYNDQSHMMPNTE*GNHFIFCISIFTKLLPYSWV*KSWINR*FTFHKRPYSRLQS*TICAKKKTN*VPKAVTITRHRK  3672

Range 4: 3269 to 3673 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
245.3 bits(529) 0.0 112/135(83%) 0/135(0%) Minus/Minus
Query        1  ISN*ARLPHAFQVLMQWL*SCSH*EGHKVENDLTSNTKFHIEATHFPQISSSPHILVL**SVSHGA*RRIRQSFHFLHKHFHQVASVWLGPKELNQLVIRFPRTILFLPSKPNRRC*EESQLSAKSSYHHQAQEK  405
                ISN*ARLPHAFQVLMQ L*SCSH*EGHKVEND T NTKFHIEA H PQ SSS HIL L**SVSH A* RIRQSFHFLHKHFHQVASV LG KEL+Q VI FP+T LF PSK +  C*EE+QLSAKSSYHHQAQEK
Subject   3269  ISN*ARLPHAFQVLMQ*L*SCSH*EGHKVENDWTLNTKFHIEAIHSPQTSSSLHILAL**SVSHDA*HRIRQSFHFLHKHFHQVASV*LGLKELDQPVIHFPQTTLFPPSKLDHLC*EENQLSAKSSYHHQAQEK  3673

Range 5: 3327 to 3671 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
227.4 bits(490) 0.0 94/115(82%) 0/115(0%) Plus/Plus
Query       59  HRRFGFEGRNKIVRGKRITS*FSSFGPNHTEATW*KCLCRK*NDCLILR*APCETDHYNTRI*GELEIWGK*VASMWNFVFEVKSFSTLCPS*WLHDYSHCISTWKA*GRRAQLL  403
                HR   FEG NK+V GK IT * SSF PN+TEATW*KCLCRK*NDCLIL *A CETDHYN RI* ELE+WG+*+ASMWNFVF+V+SFSTLCPS*WLHDYS+CISTWKA*GRRAQLL
Subject   3327  HRWSSFEGGNKVVCGK*ITG*SSSFKPNYTEATW*KCLCRK*NDCLILC*ASCETDHYNARI*SELEVWGE*MASMWNFVFKVQSFSTLCPS*WLHDYSYCISTWKA*GRRAQLL  3671

Range 6: 3269 to 3673 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
215.5 bits(464) 0.0 113/135(84%) 0/135(0%) Plus/Plus
Query        1  LFLCLVMVTAFGTQLAFFSAPTVWL*RQE*DRSWKANHQLIQLFRAQPYGSNXXXXXXXXXXXXPYSALGTM*D*SL*HQNMR*AGNLGKMSGLYVEFCV*SQIIFNLVPLLMAA*LQPLHQHLEGVR*TCSITY  405
                LFLCLVMVTAFGTQL FF A  V L*R+E* R WK NH+LIQLF+ Q YGSNLVKMLMQKMK*LPYS LG M*D*SL* QNM+*AG+LG+M+GLYVEFCV*S IIFNLVPLLMAA*LQ LHQHLEGVR*TCSITY
Subject   3269  LFLCLVMVTAFGTQLVFFLAQMV*L*RRE*GRLWKVNHRLIQLFQTQLYGSNLVKMLMQKMK*LPYSVLGIM*D*SL*RQNMK*AGSLGRMNGLYVEFCV*SPIIFNLVPLLMAA*LQLLHQHLEGVR*TCSITY  3673

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 6

Range 1: 3271 to 3672 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
331.4 bits(717) 0.0 133/134(99%) 0/134(0%) Plus/Plus
Query        3  FPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDSALSGPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYL  404
                FPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVD ALSGPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYL
Subject   3271  FPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDPALSGPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYL  3672

Range 2: 3271 to 3669 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
312.6 bits(676) 0.0 126/133(95%) 0/133(0%) Minus/Minus
Query        3  VIEHVYLTPSKC*CNGCNHAAIKRGTRLKMI*LQTQNST*RPLIFPKFPAHLIFWCYNDQSHMVPNAE*GNHFIFCISIFTKLLPYGWARKS*INW*FAFHERSYSCLQSQTVGAEKKAN*VPKAVTITRHRK  401
                +IEHVYLTPSKC*CNGCNHAAIKRGTRLKMI*LQTQNST*RPLIFPK PAHLIFWCYN+QSHMVPNAE*GNHFIFC+SIFTKLLPYGWARKS INW*F FHER YSCLQSQTVGAEKKAN*VPKAVTITRHRK
Subject   3271  IIEHVYLTPSKC*CNGCNHAAIKRGTRLKMI*LQTQNST*RPLIFPKLPAHLIFWCYNNQSHMVPNAE*GNHFIFCVSIFTKLLPYGWARKSWINW*FTFHERPYSCLQSQTVGAEKKAN*VPKAVTITRHRK  3669

Range 3: 3269 to 3670 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
300.7 bits(650) 0.0 127/134(95%) 0/134(0%) Minus/Minus
Query        1  SN*ARLPHAFQVLMQWL*SCSH*EGHKVENDLTSNTKFHIEATHFPQISSSPHILVL**SVSHGA*RRIRQSFHFLHKHFHQVASVWLGPKELNQLVIRFPRTILFLPSKPNRRC*EESQLSAKSSYHHQAQEK  402
                +N*ARLPHAFQVLMQWL*SCSH*EGHK ENDLTSNTKFHIEATHFPQ SSSPHILVL**SVSHGA*RRIRQSFHFL KHFHQVASVWLGPKEL+QLVI FPRT LFLPSKPNRRC*EESQLSAKSSYHHQAQEK
Subject   3269  NN*ARLPHAFQVLMQWL*SCSH*EGHKAENDLTSNTKFHIEATHFPQTSSSPHILVL**SVSHGA*RRIRQSFHFLRKHFHQVASVWLGPKELDQLVIHFPRTTLFLPSKPNRRC*EESQLSAKSSYHHQAQEK  3670

Range 4: 3270 to 3671 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
281.9 bits(609) 0.0 132/134(99%) 0/134(0%) Minus/Minus
Query        2  K*LSTSTSRLPSADAMAVIMQPLRGAQG*K*FDFKHKIPHRGHSFSPNFQLTSYSGVIMISLTWCLTQNKXXXXXXXXXXSPSCFRMVGPERAESTGDSLSTNDLIPAFKAKPSVLRRKPTECQKQLPSPGTGK  403
                K*LSTSTSRLPSADAMAVIMQPLRGAQG*K*FDFKHKIPHRGHSFSPNFQLTSYSGVI+ISLTWCLTQNKAIISFSA*AFSPSCFRMVGPERA STGDSLSTNDLIPAFKAKPSVLRRKPTECQKQLPSPGTGK
Subject   3270  K*LSTSTSRLPSADAMAVIMQPLRGAQG*K*FDFKHKIPHRGHSFSPNFQLTSYSGVIIISLTWCLTQNKAIISFSA*AFSPSCFRMVGPERAGSTGDSLSTNDLIPAFKAKPSVLRRKPTECQKQLPSPGTGK  3671

Range 5: 3324 to 3668 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
264.5 bits(571) 0.0 108/115(94%) 0/115(0%) Plus/Plus
Query       56  QHRRFGFEGRNKIVRGKRITS*FSSFGPNHTEATW*KCLCRK*NDCLILR*APCETDHYNTRI*GELEIWGK*VASMWNFVFEVKSFSTLCPS*WLHDYSHCISTWKA*GRRAQL  400
                QHRRFGFEGRNK+VRGK ITS* SSFGPNHTEATW*KCL RK*NDCLILR*APCETD+YNTRI*GELE+WGK*VASMWNFVFEVKSFS LCPS*WLHDYSHCISTWKA*GRRAQL
Subject   3324  QHRRFGFEGRNKVVRGK*ITS*SSSFGPNHTEATW*KCLRRK*NDCLILR*APCETDYYNTRI*GELEVWGK*VASMWNFVFEVKSFSALCPS*WLHDYSHCISTWKA*GRRAQL  3668

Range 6: 3269 to 3667 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
257.2 bits(555) 0.0 127/133(95%) 0/133(0%) Plus/Plus
Query        1  LFLCLVMVTAFGTQLAFFSAPTVWL*RQE*DRSWKANHQLIQLFRAQPYGSNXXXXXXXXXXXXPYSALGTM*D*SL*HQNMR*AGNLGKMSGLYVEFCV*SQIIFNLVPLLMAA*LQPLHQHLEGVR*TCSI  399
                LFLCLVMVTAFGTQLAFFSAPTVWL*RQE* RSWK NHQLIQLFRAQPYGSNLVKML QKMK*LPYSALGTM*D* L*HQNMR*AG+LGKMSGLYVEFCV*SQIIF+LVPLLMAA*LQPLHQHLEGVR*TCSI
Subject   3269  LFLCLVMVTAFGTQLAFFSAPTVWL*RQE*GRSWKVNHQLIQLFRAQPYGSNLVKMLTQKMK*LPYSALGTM*D*LL*HQNMR*AGSLGKMSGLYVEFCV*SQIIFSLVPLLMAA*LQPLHQHLEGVR*TCSI  3667

Rupestris stem pitting associated virus strain BS, complete genome

Sequence ID: AY881627.1 Length: 8743 Number of Matches: 7

Range 1: 3271 to 3672 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
306.7 bits(663) 0.0 122/134(91%) 0/134(0%) Plus/Plus
Query        3  FPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDSALSGPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYL  404
                F VPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESE  V  +LS PTI KQLGEN YAENEMIALFC+RHHVRLI+ITPEYEVSWKFGE+EWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYL
Subject   3271  FSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESECLVSPSLSAPTIHKQLGENVYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYL  3672

Range 2: 3270 to 3671 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
213.7 bits(460) 0.0 104/134(78%) 0/134(0%) Minus/Minus
Query        2  K*LSTSTSRLPSADAMAVIMQPLRGAQG*K*FDFKHKIPHRGHSFSPNFQLTSYSGVIMISLTWCLTQNKXXXXXXXXXXSPSCFRMVGPERAESTGDSLSTNDLIPAFKAKPSVLRRKPTECQKQLPSPGTGK  403
                +* STSTSRLP+A+AMAVIMQP  GA G K*FD + +IPHRGHS SPNFQLTSYSGVI ISLTWCL QNKAIISFSA* FSPSC  MVG ER   T  SLST D IPAFKA+PSVL +KPTECQKQLPSPGT K
Subject   3270  R*FSTSTSRLPNAEAMAVIMQPFSGAHGWK*FDLRQRIPHRGHSLSPNFQLTSYSGVITISLTWCLMQNKAIISFSA*TFSPSCL*MVGAERLGLTRHSLSTKDRIPAFKARPSVLSKKPTECQKQLPSPGTEK  3671

Range 3: 3403 to 3669 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
119.3 bits(254) 0.0 48/89(54%) 0/89(0%) Minus/Minus
Query      135  VIEHVYLTPSKC*CNGCNHAAIKRGTRLKMI*LQTQNST*RPLIFPKFPAHLIFWCYNDQSHMVPNAE*GNHFIFCISIFTKLLPYGWA  401
                +I+HV  TP +C* NGC+HA I+ G  L++I* +T+NST* PL  PK P   IFWC + Q HMVPNA+*GNH I  I+I ++L   GW+
Subject   3403  IIQHVNFTPPQC*SNGCDHATIQWGAWLEVI*FKTKNST*GPLTLPKLPTDFIFWCDHYQPHMVPNAK*GNHLILGINILSQLFVNGWS  3669

Range 4: 3271 to 3378 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.1 bits(92) 0.0 18/36(50%) 0/36(0%) Minus/Minus
Query        3  FAFHERSYSCLQSQTVGAEKKAN*VPKAVTITRHRK  110
                F  H+RS + L  +T+ AE K +*+PK +TITRHR+
Subject   3271  FTLHKRSNTSL*GKTISAE*KTD*MPKTITITRHRE  3378

Range 5: 3269 to 3667 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
130.7 bits(279) 0.0 64/133(48%) 0/133(0%) Minus/Minus
Query        1  N*ARLPHAFQVLMQWL*SCSH*EGHKVENDLTSNTKFHIEATHFPQISSSPHILVL**SVSHGA*RRIRQSFHFLHKHFHQVASVWLGPKELNQLVIRFPRTILFLPSKPNRRC*EESQLSAKSSYHHQAQEK  399
                N AR  HA  +L QWL*SC+H  G  V +DL  + +FHI ATH PQ S+  HILV   S SHGA* +IRQS H  HKH   V   WL  + L+ L I  P+ I + P + + +C* +++L+AK++YHHQAQ +
Subject   3269  NSARQLHASPMLKQWL*SCNHSVGRMVGSDLI*DKEFHIGATHSPQTSN*LHILV*SLSASHGA*CKIRQSSHSRHKHSLPVVCEWLELRGLDLLGIHSPQKIEYQPLRQDHQC*VKNRLNAKNNYHHQAQRR  3667

Range 6: 3324 to 3668 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.9 bits(264) 0.0 56/115(49%) 0/115(0%) Plus/Plus
Query       56  QHRRFGFEGRNKIVRGKRITS*FSSFGPNHTEATW*KCLCRK*NDCLILR*APCETDHYNTRI*GELEIWGK*VASMWNFVFEVKSFSTLCPS*WLHDYSHCISTWKA*GRRAQL  400
                QH     +G   I  G+ + S       NH++ T  +CLCR+*+DCLIL *APCE D  +TRI* +LE+WG+*VA MWN +  +KS  T+ P+ WLHD+SHC S  +A*  RA+L
Subject   3324  QH*WSCLKGWYSIFCGE*MPSKSKPLSSNHSQTTGRECLCRE*DDCLILH*APCEADSDHTRI*SQLEVWGE*VAPMWNSLS*IKSLPTMRPTEWLHDHSHCFSIGEA*S*RAEL  3668

Range 7: 3275 to 3661 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
108.3 bits(230) 0.0 66/129(51%) 0/129(0%) Plus/Plus
Query        7  LCLVMVTAFGTQLAFFSAPTVWL*RQE*DRSWKANHQLIQLFRAQPYGSNXXXXXXXXXXXXPYSALGTM*D*SL*HQNMR*AGNLGKMSGLYVEFCV*SQIIFNLVPLLMAA*LQPLHQHLEGVR*TC  393
                LCLVMV  FG Q  F+SA  V  *R   D  W+ N   +Q  + QP+ +N  +M M +M+*LPY ALGTM* *   HQNM+  G+LG++SG YVEF V +QI  N  P  M A* QPL QH  GV+ TC
Subject   3275  LCLVMVIVFGIQSVFYSALMVLP*RLVFDLLWRVNA**VQASQLQPFTNNWERMFMPRMR*LPYFALGTM*G***SHQNMKSVGSLGRVSGPYVEFFVLNQITSNHAPH*MVA*SQPLLQHWGGVKLTC  3661

Grapevine rupestris stem pitting associated virus isolate SK30, complete genome

Sequence ID: KX274277.1 Length: 8724 Number of Matches: 7

Range 1: 3271 to 3672 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
305.3 bits(660) 0.0 122/134(91%) 0/134(0%) Plus/Plus
Query        3  FPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDSALSGPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYL  404
                F VPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESE  V   LS PTI KQLGEN YAENEMIALFC+RHHVRLI+ITPEYEVSWKFGE+EWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYL
Subject   3271  FSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESECLVSPNLSAPTIHKQLGENVYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYL  3672

Range 2: 3270 to 3671 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
211.8 bits(456) 0.0 103/134(77%) 0/134(0%) Minus/Minus
Query        2  K*LSTSTSRLPSADAMAVIMQPLRGAQG*K*FDFKHKIPHRGHSFSPNFQLTSYSGVIMISLTWCLTQNKXXXXXXXXXXSPSCFRMVGPERAESTGDSLSTNDLIPAFKAKPSVLRRKPTECQKQLPSPGTGK  403
                +* STSTSRLP+A+AMAVIMQP  GA G K*FD + +IPHRGHS SPNFQLTSYSGVI ISLTWCL QNKAIISFSA* FSP+C  MVG ER   T  SLST D IPAFKA+PSVL +KPTECQKQLPSPGT K
Subject   3270  R*FSTSTSRLPNAEAMAVIMQPFSGAHGWK*FDLRQRIPHRGHSLSPNFQLTSYSGVITISLTWCLMQNKAIISFSA*TFSPNCL*MVGAERFGLTRHSLSTKDRIPAFKARPSVLSKKPTECQKQLPSPGTEK  3671

Range 3: 3403 to 3669 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
119.3 bits(254) 0.0 48/89(54%) 0/89(0%) Minus/Minus
Query      135  VIEHVYLTPSKC*CNGCNHAAIKRGTRLKMI*LQTQNST*RPLIFPKFPAHLIFWCYNDQSHMVPNAE*GNHFIFCISIFTKLLPYGWA  401
                +I+HV  TP +C* NGC+HA I+ G  L++I* +T+NST* PL  PK P   IFWC + Q HMVPNA+*GNH I  I+I ++L   GW+
Subject   3403  IIQHVNFTPPQC*SNGCDHATIQWGAWLEVI*FKTKNST*GPLTLPKLPTDFIFWCDHYQPHMVPNAK*GNHLILGINILSQLFVNGWS  3669

Range 4: 3271 to 3378 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.1 bits(92) 0.0 18/36(50%) 0/36(0%) Minus/Minus
Query        3  FAFHERSYSCLQSQTVGAEKKAN*VPKAVTITRHRK  110
                F  H+RS + L  +T+ AE K +*+PK +TITRHR+
Subject   3271  FTLHKRSNTSL*GKTISAE*KTD*MPKTITITRHRE  3378

Range 5: 3269 to 3667 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
130.3 bits(278) 0.0 63/133(47%) 0/133(0%) Minus/Minus
Query        1  N*ARLPHAFQVLMQWL*SCSH*EGHKVENDLTSNTKFHIEATHFPQISSSPHILVL**SVSHGA*RRIRQSFHFLHKHFHQVASVWLGPKELNQLVIRFPRTILFLPSKPNRRC*EESQLSAKSSYHHQAQEK  399
                N AR  HA  +L QWL*SC+H  G  V +DL  + +FHI ATH PQ S+  HILV   S SHGA* +IRQS H  HKH   +   WL  + L+ L I  P+ I + P + + +C* +++L+AK++YHHQAQ +
Subject   3269  NSARQLHASPMLKQWL*SCNHSVGRMVGSDLI*DKEFHIGATHSPQTSN*LHILV*SLSASHGA*CKIRQSSHSRHKHSLPIVCEWLELRGLDLLGIHSPQKIEYQPLRQDHQC*VKNRLNAKNNYHHQAQRR  3667

Range 6: 3324 to 3668 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
121.1 bits(258) 0.0 55/115(48%) 0/115(0%) Plus/Plus
Query       56  QHRRFGFEGRNKIVRGKRITS*FSSFGPNHTEATW*KCLCRK*NDCLILR*APCETDHYNTRI*GELEIWGK*VASMWNFVFEVKSFSTLCPS*WLHDYSHCISTWKA*GRRAQL  400
                QH     +G   I  G+ + S       NH++    +CLCR+*+DCLIL *APCE D  +TRI* +LE+WG+*VA MWN +  +KS  T+ P+ WLHD+SHC S  +A*  RA+L
Subject   3324  QH*WSCLKGWYSIFCGE*MPSKSKPLSSNHSQTIGRECLCRE*DDCLILH*APCEADSDHTRI*SQLEVWGE*VAPMWNSLS*IKSLPTMRPTEWLHDHSHCFSIGEA*S*RAEL  3668

Range 7: 3275 to 3661 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
108.3 bits(230) 0.0 66/129(51%) 0/129(0%) Plus/Plus
Query        7  LCLVMVTAFGTQLAFFSAPTVWL*RQE*DRSWKANHQLIQLFRAQPYGSNXXXXXXXXXXXXPYSALGTM*D*SL*HQNMR*AGNLGKMSGLYVEFCV*SQIIFNLVPLLMAA*LQPLHQHLEGVR*TC  393
                LCLVMV  FG Q  F+SA  V  *R   D  W+ N   +Q  + QP+ +N  +M M +M+*LPY ALGTM* *   HQNM+  G+LG++SG YVEF V +QI  N  P  M A* QPL QH  GV+ TC
Subject   3275  LCLVMVIVFGIQSVFYSALMVLP*RLVFDLLWRVNA**VQTSQLQPFTNNWERMFMPRMR*LPYFALGTM*G***SHQNMKSVGSLGRVSGPYVEFFVLNQITSNHAPH*MVA*SQPLLQHWGGVKLTC  3661

Grapevine rupestris stem pitting associated virus isolate SK704 C, complete genome

Sequence ID: KX274276.1 Length: 8726 Number of Matches: 7

Range 1: 3272 to 3673 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
305.3 bits(660) 0.0 123/134(92%) 0/134(0%) Plus/Plus
Query        3  FPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDSALSGPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYL  404
                F VPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESE  V S LS PTI KQL ENAYAENEMIALFCVRHHVRLI++TPEYEVSWKFGE+EWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYL
Subject   3272  FSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESERLVSSDLSAPTISKQLEENAYAENEMIALFCVRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYL  3673

Range 2: 3271 to 3672 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
207.7 bits(447) 0.0 100/134(75%) 0/134(0%) Minus/Minus
Query        2  K*LSTSTSRLPSADAMAVIMQPLRGAQG*K*FDFKHKIPHRGHSFSPNFQLTSYSGVIMISLTWCLTQNKXXXXXXXXXXSPSCFRMVGPERAESTGDSLSTNDLIPAFKAKPSVLRRKPTECQKQLPSPGTGK  403
                +* +TSTSRLPSA+AMAVIMQP  GAQG K* DF+ +IPHRGHS SPNFQLTSYSGV  ISLTWC TQN AIISFSA*AFS +C  +VG ER+E T  SLST D +PAF+A+PSVL +KPTECQKQLPSPGT K
Subject   3271  R*FNTSTSRLPSAEAMAVIMQPFNGAQGWK*LDFRQRIPHRGHSLSPNFQLTSYSGVTTISLTWCRTQNNAIISFSA*AFSSNCLEIVGAERSELTRRSLSTKDRMPAFRARPSVLSKKPTECQKQLPSPGTEK  3672

Range 3: 3278 to 3670 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
164.2 bits(352) 0.0 70/131(53%) 0/131(0%) Minus/Minus
Query        9  VIEHVYLTPSKC*CNGCNHAAIKRGTRLKMI*LQTQNST*RPLIFPKFPAHLIFWCYNDQSHMVPNAE*GNHFIFCISIFTKLLPYGWARKS*INW*FAFHERSYSCLQSQTVGAEKKAN*VPKAVTITRH  401
                +I H+  TP K * NGC+HA I+ G RL++I LQ +NST*RPL FPKFP + IFWCY+ Q ++VP+ +* NHFIF I I  +L    W+ K * N  F FHERS + LQS+T+  E++ N*+PKA+ ITR+
Subject   3278  II*HINFTPPKR*GNGCDHATIQWGARLEVIGLQAKNST*RPLTFPKFPTNFIFWCYHYQPYVVPDTK*CNHFIFSIGILLQLFRNSWS*KI*TNQAFTFHERSNAGLQSKTISTEQETN*MPKAIAITRY  3670

Range 4: 3270 to 3650 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
133.0 bits(284) 0.0 64/127(50%) 0/127(0%) Minus/Minus
Query        1  HAFQVLMQWL*SCSH*EGHKVENDLTSNTKFHIEATHFPQISSSPHILVL**SVSHGA*RRIRQSFHFLHKHFHQVASVWLGPKELNQLVIRFPRTILFLPSKPNRRC*EESQLSAKSSYHHQAQEK  381
                HA Q L QWL*SC+H  G K  +D TS  +FHIEATHFPQIS+  HILVL  S   GA  +I QSFHF H+H   +    L  K+LN   + FPR I   PS+ + + *  +QL+AKS+ HHQ + K
Subject   3270  HASQALRQWL*SCNHSMGRKAGSDWTSGKEFHIEATHFPQISN*LHILVLPLSALRGAGHKIMQSFHFQHRHSPPIV*K*LELKDLN*PGVHFPRKIECRPSEQDHQY*ARNQLNAKSNCHHQVRRK  3650

Range 5: 3346 to 3651 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
127.5 bits(272) 0.0 59/102(58%) 0/102(0%) Plus/Plus
Query       77  EGRNKIVRGKRITS*FSSFGPNHTEATW*KCLCRK*NDCLILR*APCETDHYNTRI*GELEIWGK*VASMWNFVFEVKSFSTLCPS*WLHDYSHCISTWKA*  382
                EGR+ I RGK    *F SF  N+      +CLC K*NDC+IL  AP + D  NTRI*  LEIWGK*VASMWN + EV+S   L P  WLHD+SHC+S W+A*
Subject   3346  EGRHSIFRGK*TPG*FRSFSSNYF*TIGGECLC*K*NDCIILCPAPRKADSGNTRI*S*LEIWGK*VASMWNSLPEVQSLPALRPIEWLHDHSHCLSAWEA*  3651

Range 6: 3465 to 3662 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.7 bits(148) 0.0 38/66(58%) 0/66(0%) Plus/Plus
Query      196  YSALGTM*D*SL*HQNMR*AGNLGKMSGLYVEFCV*SQIIFNLVPLLMAA*LQPLHQHLEGVR*TC  393
                Y   GT * *  *HQNM+  GNLGK+SGLYVEF  *S I  +L P  M A* QPL Q L GV+  C
Subject   3465  YFVSGTT*G**W*HQNMKLVGNLGKVSGLYVEFFA*SPITSSLAPH*MVA*SQPLPQRLGGVKLMC  3662

Range 7: 3282 to 3425 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.1 bits(92) 0.0 23/48(48%) 0/48(0%) Plus/Plus
Query       13  LVMVTAFGTQLAFFSAPTVWL*RQE*DRSWKANHQLIQLFRAQPYGSN  156
                LVM  AFG QL   S   V L*R   D SWK N  L+Q+F+ Q + +N
Subject   3282  LVMAIAFGIQLVSCSVLMVLL*RPAFDLSWKVNAWLVQIFQLQLFLNN  3425

Nucleotide Sequence (544 letters)

Query ID:ds2016-58_48
Query definition:No definition line
Query length:589
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 13 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
55
110
165
220
275
330
385
440
495
544

Descriptions

Alignments

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OE8

Sequence ID: AB277784.1 Length: 2876 Number of Matches: 9

Range 1: 1070 to 1519 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
361.7 bits(783) 0.0 150/150(100%) 0/150(0%) Minus/Plus
Query       93  NILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHRKKLVIMQ*NAFSAAC  542
                NILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHRKKLVIMQ*NAFSAAC
Subject   1070  NILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHRKKLVIMQ*NAFSAAC  1519

Range 2: 1070 to 1522 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
340.1 bits(736) 0.0 144/151(95%) 0/151(0%) Plus/Minus
Query       90  IAGC*KGILLHNDQFLPMSCGSDVKPVPVLWGWVS*FQKGYHIEG*TSNLTRQLEFRVVRNSEIYRLLAKTYQHPFNI*SEGRSHNDVVQPVAANFKTERGKVFASVHTKPTSFGLNEMRLFWNTDILVRV*KQYIKTRNVLNGQVLIKYV  542
                +AGC*KGILLHNDQFLPMSCGSDVKPVPVLWGWVS*FQKGYHIEG*TSNLTR LEFRVVRNSEIYRLLAKTYQHPFNI*SEGRSHNDVVQPVAANF+TERGKVFASVHTKPTS  LNEMRLF NTDILVRV*KQYIKTRNVLNGQVLIKY+
Subject   1070  LAGC*KGILLHNDQFLPMSCGSDVKPVPVLWGWVS*FQKGYHIEG*TSNLTR*LEFRVVRNSEIYRLLAKTYQHPFNI*SEGRSHNDVVQPVAANFETERGKVFASVHTKPTSLRLNEMRLFGNTDILVRV*KQYIKTRNVLNGQVLIKYI  1522

Range 3: 1069 to 1530 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
320.4 bits(693) 0.0 144/154(94%) 0/154(0%) Minus/Plus
Query       82  KHT**VLVRSRHFGF*CTVFRPVPEYQYSKRGAFH*VQNL*VWCEHLQIPFLFXXXXXXXXXXXRHCGIALHSRC*RGADMFWQGGGRSRCCAQL*IQVAV*GSRFNLQCGNPFEIKRPNPRGQALVLHRCHKT*EEIGHYAVKCLFSSLLLSK  543
                ++T**VLVRSRHFGF*CTVFRPVPEYQYS+RGAFH*V +L*VWCEHLQIPFLFRF S*QRRAGRRHCGIALHSRC*RGADMFWQGGGRSRCCAQL*IQV V*GSRFNLQCGNPFEIKRPNPRGQALVLHRCHKT*EEIGHYAVKCLFSSLL+ +
Subject   1069  EYT**VLVRSRHFGF*CTVFRPVPEYQYSQRGAFH*V*DL*VWCEHLQIPFLFRFQS*QRRAGRRHCGIALHSRC*RGADMFWQGGGRSRCCAQL*IQVTV*GSRFNLQCGNPFEIKRPNPRGQALVLHRCHKT*EEIGHYAVKCLFSSLLIGQ  1530

Range 4: 1273 to 1521 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.4 bits(418) 0.0 83/83(100%) 0/83(0%) Plus/Minus
Query       91  *QAAEKAFYCIMTNFFLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPRTSHGNLNSELCATARSTASLPKHISTPSTSRVKGD  339
                *QAAEKAFYCIMTNFFLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPRTSHGNLNSELCATARSTASLPKHISTPSTSRVKGD
Subject   1273  *QAAEKAFYCIMTNFFLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPRTSHGNLNSELCATARSTASLPKHISTPSTSRVKGD  1521

Range 5: 1069 to 1224 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
121.1 bits(258) 0.0 50/52(96%) 0/52(0%) Plus/Minus
Query      388  EERYLQVFTPNLQVLDLMKCASFGILIFWYGSENSTSKPEMS*TDKYSSSMF  543
                EERYLQVFTPNLQVLDLMKCAS GILIFWYGSENSTSKPEMS*TDKYSSS+F
Subject   1069  EERYLQVFTPNLQVLDLMKCASLGILIFWYGSENSTSKPEMS*TDKYSSSIF  1224

Range 6: 1074 to 1313 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
177.5 bits(381) 0.0 76/80(95%) 0/80(0%) Minus/Plus
Query      299  YLMSTCPFKTFRVLMYCFQTRTRISVFQKRRISLSPKLVGLV*TLANTFPLSVLKLAATGWTTSLWDRPSL*MLKGC*YV  538
                YLMSTCPFKTFRVLMYCFQTRTRISVF KRRISLS +LVGLV*TLANTFPLSV KLAATGWTTSLWDRPSL*MLKGC*YV
Subject   1074  YLMSTCPFKTFRVLMYCFQTRTRISVFPKRRISLSLRLVGLV*TLANTFPLSVSKLAATGWTTSLWDRPSL*MLKGC*YV  1313

Range 7: 1356 to 1520 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
134.4 bits(287) 0.0 54/55(98%) 0/55(0%) Minus/Plus
Query       92  NSSCRVRFEVQPSMW*PF*NQETQPQRTGTGFTSLPQDIGRNWSLCSKMPFQQPA  256
                NSS RVRFEVQPSMW*PF*NQETQPQRTGTGFTSLPQDIGRNWSLCSKMPFQQPA
Subject   1356  NSSYRVRFEVQPSMW*PF*NQETQPQRTGTGFTSLPQDIGRNWSLCSKMPFQQPA  1520

Range 8: 1284 to 1520 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
188.0 bits(404) 0.0 78/79(99%) 0/79(0%) Plus/Minus
Query       92  SRLLKRHFTA**PISSYVLWQRCKTSACPLGLGLLISKGLPH*RLNLEPHTAT*IQSCAQQRDLPPPCQNISAPLQHLE  328
                SRLLKRHFTA**PISSYVLWQRCKTSACPLGLGLLISKGLPH*RLNLEPHT T*IQSCAQQRDLPPPCQNISAPLQHLE
Subject   1284  SRLLKRHFTA**PISSYVLWQRCKTSACPLGLGLLISKGLPH*RLNLEPHTVT*IQSCAQQRDLPPPCQNISAPLQHLE  1520

Range 9: 1074 to 1226 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
115.6 bits(246) 0.0 48/51(94%) 0/51(0%) Plus/Minus
Query      386  KRKGICKCSHQTYKFWT**NAPLLEY*YSGTGLKTVHQNPKCLERTSTHQV  538
                KRKGICKCSHQTYK  T**NAPL EY*YSGTGLKTVHQNPKCLERTSTHQV
Subject   1074  KRKGICKCSHQTYKS*T**NAPLWEY*YSGTGLKTVHQNPKCLERTSTHQV  1226

Grapevine rupestris stem pitting associated virus complete genome, genomic RNA, isolate GRSPaV MG

Sequence ID: FR691076.1 Length: 8749 Number of Matches: 10

Range 1: 6814 to 7263 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
357.6 bits(774) 0.0 148/150(99%) 0/150(0%) Minus/Plus
Query       93  NILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHRKKLVIMQ*NAFSAAC  542
                NILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSP TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPED+HWFYIAATRHRKKLVIMQ*NAFSAAC
Subject   6814  NILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPLTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDKHWFYIAATRHRKKLVIMQ*NAFSAAC  7263

Range 2: 6814 to 7266 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
333.7 bits(722) 0.0 142/151(94%) 0/151(0%) Plus/Minus
Query       90  IAGC*KGILLHNDQFLPMSCGSDVKPVPVLWGWVS*FQKGYHIEG*TSNLTRQLEFRVVRNSEIYRLLAKTYQHPFNI*SEGRSHNDVVQPVAANFKTERGKVFASVHTKPTSFGLNEMRLFWNTDILVRV*KQYIKTRNVLNGQVLIKYV  542
                +AGC*KGILLHNDQFLPMSCGSDVKPV VLWGWVS*FQKGYHIEG*TSNLTRQLEFRVV NSEIYRLLAKTYQHPFNI*SEG SHNDVVQPVA NF+TERGKVFASVHTKPTS GLNEMRLF NTDILVRV*KQYIKTRNVLNGQVLIKY+
Subject   6814  LAGC*KGILLHNDQFLPMSCGSDVKPVLVLWGWVS*FQKGYHIEG*TSNLTRQLEFRVVCNSEIYRLLAKTYQHPFNI*SEG*SHNDVVQPVATNFETERGKVFASVHTKPTSLGLNEMRLFGNTDILVRV*KQYIKTRNVLNGQVLIKYI  7266

Range 3: 7008 to 7265 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
207.3 bits(446) 0.0 83/86(97%) 0/86(0%) Minus/Plus
Query       91  HCGIALHSRC*RGADMFWQGGGRSRCCAQL*IQVAV*GSRFNLQCGNPFEIKRPNPRGQALVLHRCHKT*EEIGHYAVKCLFSSLL  348
                HCGI  HSRC*RGADMFWQGGGRSRCC QL*IQVAV*GSRFNLQCGNPFEIKRPNPRGQALVLHRCHKT*EEIGHYAVKCLFSSLL
Subject   7008  HCGITPHSRC*RGADMFWQGGGRSRCCTQL*IQVAV*GSRFNLQCGNPFEIKRPNPRGQALVLHRCHKT*EEIGHYAVKCLFSSLL  7265

Range 4: 6813 to 6971 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
120.7 bits(257) 0.0 49/53(92%) 0/53(0%) Minus/Plus
Query      385  KHT**VLVRSRHFGF*CTVFRPVPEYQYSKRGAFH*VQNL*VWCEHLQIPFLF  543
                ++T**VLVRSRHFGF*CTVFRPVPEYQYS+RGAFH*VQ+L*VWCEHLQIPFLF
Subject   6813  EYT**VLVRSRHFGF*CTVFRPVPEYQYSQRGAFH*VQDL*VWCEHLQIPFLF  6971

Range 5: 7017 to 7265 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
193.1 bits(415) 0.0 82/83(99%) 0/83(0%) Plus/Minus
Query       91  *QAAEKAFYCIMTNFFLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPRTSHGNLNSELCATARSTASLPKHISTPSTSRVKGD  339
                *QAAEKAFYCIMTNFFLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPRTSHGNLNSELCATARSTASLPKHISTPSTSRV+GD
Subject   7017  *QAAEKAFYCIMTNFFLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPRTSHGNLNSELCATARSTASLPKHISTPSTSRVRGD  7265

Range 6: 6818 to 6970 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
122.5 bits(261) 0.0 49/51(96%) 0/51(0%) Plus/Minus
Query      386  KRKGICKCSHQTYKFWT**NAPLLEY*YSGTGLKTVHQNPKCLERTSTHQV  538
                KRKGICKCSHQTYK WT**NAPL EY*YSGTGLKTVHQNPKCLERTSTHQV
Subject   6818  KRKGICKCSHQTYKSWT**NAPLWEY*YSGTGLKTVHQNPKCLERTSTHQV  6970

Range 7: 6818 to 7057 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
177.9 bits(382) 0.0 75/80(94%) 0/80(0%) Minus/Plus
Query      299  YLMSTCPFKTFRVLMYCFQTRTRISVFQKRRISLSPKLVGLV*TLANTFPLSVLKLAATGWTTSLWDRPSL*MLKGC*YV  538
                YLMSTCPFKTFRVLMYCFQTRTRISVF KRRISLSP+LVGLV*TLANTFPLSV KL ATGWTTSLWD PSL*MLKGC*YV
Subject   6818  YLMSTCPFKTFRVLMYCFQTRTRISVFPKRRISLSPRLVGLV*TLANTFPLSVSKLVATGWTTSLWDHPSL*MLKGC*YV  7057

Range 8: 7100 to 7264 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
136.7 bits(292) 0.0 54/55(98%) 0/55(0%) Minus/Plus
Query       92  NSSCRVRFEVQPSMW*PF*NQETQPQRTGTGFTSLPQDIGRNWSLCSKMPFQQPA  256
                NSSCRVRFEVQPSMW*PF*NQETQPQRT TGFTSLPQDIGRNWSLCSKMPFQQPA
Subject   7100  NSSCRVRFEVQPSMW*PF*NQETQPQRTSTGFTSLPQDIGRNWSLCSKMPFQQPA  7264

Range 9: 7028 to 7264 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
188.0 bits(404) 0.0 78/79(99%) 0/79(0%) Plus/Minus
Query       92  SRLLKRHFTA**PISSYVLWQRCKTSACPLGLGLLISKGLPH*RLNLEPHTAT*IQSCAQQRDLPPPCQNISAPLQHLE  328
                SRLLKRHFTA**PISSYVLWQRCKTSACPLGLGLLISKGLPH*RLNLEPHTAT*IQSC QQRDLPPPCQNISAPLQHLE
Subject   7028  SRLLKRHFTA**PISSYVLWQRCKTSACPLGLGLLISKGLPH*RLNLEPHTAT*IQSCVQQRDLPPPCQNISAPLQHLE  7264

Range 10: 6813 to 6968 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
121.1 bits(258) 0.0 50/52(96%) 0/52(0%) Plus/Minus
Query      388  EERYLQVFTPNLQVLDLMKCASFGILIFWYGSENSTSKPEMS*TDKYSSSMF  543
                EERYLQVFTPNLQVLDLMKCAS GILIFWYGSENSTSKPEMS*TDKYSSS+F
Subject   6813  EERYLQVFTPNLQVLDLMKCASLGILIFWYGSENSTSKPEMS*TDKYSSSIF  6968

Grapevine Rupestris stem pitting associated virus, complete genome

Sequence ID: AF026278.1 Length: 8725 Number of Matches: 9

Range 1: 6814 to 7263 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
352.1 bits(762) 0.0 145/150(97%) 0/150(0%) Minus/Plus
Query       93  NILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHRKKLVIMQ*NAFSAAC  542
                NILDEYLSVQD SGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLD VIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHR+KL+IMQ*+AFSAAC
Subject   6814  NILDEYLSVQDFSGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDKVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAAC  7263

Range 2: 7017 to 7262 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
171.1 bits(367) 0.0 74/82(90%) 0/82(0%) Plus/Minus
Query       94  QAAEKAFYCIMTNFFLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPRTSHGNLNSELCATARSTASLPKHISTPSTSRVKGD  339
                QAAEKA YC++ NF LCLVAAM*NQCLSSGVGSLDFKRVTTLKVEP TS GNLNSELCATARSTASLPKHISTPSTS VKGD
Subject   7017  QAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSELCATARSTASLPKHISTPSTSSVKGD  7262

Range 3: 6813 to 6968 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
113.3 bits(241) 0.0 46/52(88%) 0/52(0%) Plus/Minus
Query      388  EERYLQVFTPNLQVLDLMKCASFGILIFWYGSENSTSKPEMS*TDKYSSSMF  543
                EERYLQVFTPNLQV DLMKCAS G+L+FWYGSENSTSKPE S TDKYSSSMF
Subject   6813  EERYLQVFTPNLQVFDLMKCASLGMLMFWYGSENSTSKPEKSWTDKYSSSMF  6968

Range 4: 6814 to 7263 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
241.2 bits(520) 0.0 103/150(69%) 0/150(0%) Plus/Minus
Query       93  AGC*KGILLHNDQFLPMSCGSDVKPVPVLWGWVS*FQKGYHIEG*TSNLTRQLEFRVVRNSEIYRLLAKTYQHPFNI*SEGRSHNDVVQPVAANFKTERGKVFASVHTKPTSFGLNEMRLFWNTDILVRV*KQYIKTRNVLNGQVLIKYV  542
                AGC*KGILLH+ QFLP+SC S+VKPVP+LWGW+S*FQK Y ++ *TSN TR  EFRVVRN EI+ LLAK Y HPFNI  + R HND VQ V AN KTE GK+FAS+H KPTSF L+EM LF N D+LV V +Q+IKT  +L+GQVLIKYV
Subject   6814  AGC*KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVVRNGEIHCLLAKAY*HPFNIQCKRRPHNDFVQTVTANLKTEGGKIFASIHAKPTSF*LDEMCLFRNADVLVWVREQHIKT*KILDGQVLIKYV  7263

Range 5: 7008 to 7274 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.0 bits(273) 0.0 55/89(62%) 0/89(0%) Minus/Plus
Query       82  HCGIALHSRC*RGADMFWQGGGRSRCCAQL*IQVAV*GSRFNLQCGNPFEIKRPNPRGQALVLHRCHKT*EEIGHYAVKCLFSSLLLSK  348
                HCG+A ++ C*RGA+M WQGG  SR CAQL*IQ+ +*  RFN    N FEIKR NPRG ALVLH C+KT  EI ++AV+CLFSSL + +
Subject   7008  HCGVAFYTGC*RGANMLWQGGSGSRRCAQL*IQITL*S*RFNF*RRNSFEIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFSSLRIGQ  7274

Range 6: 6813 to 6968 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
77.6 bits(163) 0.0 34/52(65%) 0/52(0%) Minus/Plus
Query      388  KHT**VLVRSRHFGF*CTVFRPVPEYQYSKRGAFH*VQNL*VWCEHLQIPFL  543
                +HT**VLVR R F F*C V  P+P++Q+S RG FH V+NL*VW E+LQI FL
Subject   6813  EHT**VLVRPRFFRF*CAVLGPIPKHQHS*RGTFHQVKNL*VWREYLQISFL  6968

Range 7: 6812 to 7264 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
182.5 bits(392) 0.0 102/151(68%) 0/151(0%) Minus/Plus
Query       92  *TYLMSTCPFKTFRVLMYCFQTRTRISVFQKRRISLSPKLVGLV*TLANTFPLSVLKLAATGWTTSLWDRPSL*MLKGC*YVXXXXXXXXXXXXXLNSSCRVRFEVQPSMW*PF*NQETQPQRTGTGFTSLPQDIGRNWSLCSKMPFQQPA  544
                *TYLMSTCP K F+VLM C +T T+ S F KR IS S KLVGL * LAN FP SVL+LA T WT SLW R    MLKGC*Y LARR+ IS LRTTLNS+  V+ EVQ    * F*NQE QPQR GTGFT L QD GRN   CSKMPFQQPA
Subject   6812  *TYLMSTCPSKIFQVLMCCSRTHTKTSAFLKRHISSSQKLVGLA*ILANIFPPSVLRLAVTVWTKSLWGRLLHWMLKGC*YALARRQWISPLRTTLNSNYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQQPA  7264

Range 8: 7034 to 7261 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
108.3 bits(230) 0.0 53/76(70%) 0/76(0%) Plus/Minus
Query       95  RLLKRHFTA**PISSYVLWQRCKTSACPLGLGLLISKGLPH*RLNLEPHTAT*IQSCAQQRDLPPPCQNISAPLQH  322
                RLLKRH TA*  IS  VL Q+CKTSA PLGL LLISK L  *+LNL  H   *IQSCAQ+RD  PPCQ+I APLQH
Subject   7034  RLLKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKELRR*KLNL*LHKVI*IQSCAQRRDPLPPCQSILAPLQH  7261

Range 9: 6815 to 6970 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
74.8 bits(157) 0.0 35/52(67%) 0/52(0%) Plus/Minus
Query      386  KRKGICKCSHQTYKFWT**NAPLLEY*YSGTGLKTVHQNPKCLERTSTHQVC  541
                +RK ICK S QTYKF T**N PL E *  G G +T HQN K L RTSTHQVC
Subject   6815  RRKDICKYSRQTYKFLT**NVPL*EC*CFGMGPRTAHQNLKNLGRTSTHQVC  6970

Rupestris stem pitting associated virus 1, complete genome

Sequence ID: AF057136.1 Length: 8744 Number of Matches: 9

Range 1: 6815 to 7264 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
352.1 bits(762) 0.0 145/150(97%) 0/150(0%) Minus/Plus
Query       93  NILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHRKKLVIMQ*NAFSAAC  542
                NILDEYLSVQD SGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLD VIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHR+KL+IMQ*+AFSAAC
Subject   6815  NILDEYLSVQDFSGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDKVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAAC  7264

Range 2: 7018 to 7263 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
171.1 bits(367) 0.0 74/82(90%) 0/82(0%) Plus/Minus
Query       94  QAAEKAFYCIMTNFFLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPRTSHGNLNSELCATARSTASLPKHISTPSTSRVKGD  339
                QAAEKA YC++ NF LCLVAAM*NQCLSSGVGSLDFKRVTTLKVEP TS GNLNSELCATARSTASLPKHISTPSTS VKGD
Subject   7018  QAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSELCATARSTASLPKHISTPSTSSVKGD  7263

Range 3: 6817 to 6969 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
108.7 bits(231) 0.0 44/51(86%) 0/51(0%) Plus/Minus
Query      388  EERYLQVFTPNLQVLDLMKCASFGILIFWYGSENSTSKPEMS*TDKYSSSM  540
                EERYLQVFTPNLQV DLMKCAS G+L+FWYGSENSTSKPE S TDKYSSS+
Subject   6817  EERYLQVFTPNLQVFDLMKCASLGMLMFWYGSENSTSKPEKSWTDKYSSSI  6969

Range 4: 6815 to 7264 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
243.0 bits(524) 0.0 103/150(69%) 0/150(0%) Plus/Minus
Query       93  AGC*KGILLHNDQFLPMSCGSDVKPVPVLWGWVS*FQKGYHIEG*TSNLTRQLEFRVVRNSEIYRLLAKTYQHPFNI*SEGRSHNDVVQPVAANFKTERGKVFASVHTKPTSFGLNEMRLFWNTDILVRV*KQYIKTRNVLNGQVLIKYV  542
                AGC*KGILLH+ QFLP+SC S+VKPVP+LWGW+S*FQK Y ++ *TSN TR  EFRVVRNSEI+ LL K Y HPFNI* + R HND VQ V AN KTE GK+FAS+H KPTSF L+EM LF N D+LV V +Q+IKT  +L+GQVLIKY+
Subject   6815  AGC*KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVVRNSEIHCLLTKAY*HPFNI*CKRRPHNDFVQTVTANLKTEGGKIFASIHAKPTSF*LDEMCLFRNADVLVWVREQHIKT*KILDGQVLIKYI  7264

Range 5: 7009 to 7275 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
132.6 bits(283) 0.0 56/89(63%) 0/89(0%) Minus/Plus
Query       82  HCGIALHSRC*RGADMFWQGGGRSRCCAQL*IQVAV*GSRFNLQCGNPFEIKRPNPRGQALVLHRCHKT*EEIGHYAVKCLFSSLLLSK  348
                HCG+A ++RC*RGA+M W GG  SRCCAQL*IQ+ +*  RFN    N FEIKR NPRG ALVLH C+KT  EI ++AV+CLFSSL + +
Subject   7009  HCGVAFYTRC*RGANMLW*GGSGSRCCAQL*IQITL*S*RFNF*RRNSFEIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFSSLRIGQ  7275

Range 6: 6817 to 6969 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
74.4 bits(156) 0.0 33/51(65%) 0/51(0%) Minus/Plus
Query      388  HT**VLVRSRHFGF*CTVFRPVPEYQYSKRGAFH*VQNL*VWCEHLQIPFL  540
                +T**VLVR R F F*C V  P+P++Q+S RG FH V+NL*VW E+LQI FL
Subject   6817  YT**VLVRPRFFRF*CAVLGPIPKHQHS*RGTFHQVKNL*VWREYLQISFL  6969

Range 7: 6819 to 7265 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
182.1 bits(391) 0.0 101/149(68%) 0/149(0%) Minus/Plus
Query       92  YLMSTCPFKTFRVLMYCFQTRTRISVFQKRRISLSPKLVGLV*TLANTFPLSVLKLAATGWTTSLWDRPSL*MLKGC*YVXXXXXXXXXXXXXLNSSCRVRFEVQPSMW*PF*NQETQPQRTGTGFTSLPQDIGRNWSLCSKMPFQQPA  538
                YLMSTCP K F+VLM C +T T+ S F KR IS S KLVGL * LAN FP SVL+LA T WT SLW R   *MLKGC*Y L RR+ ISLLRTTLNS+  V+ EVQ    * F*NQE QPQR GTGFT L QD GRN   CSKMPFQQPA
Subject   6819  YLMSTCPSKIFQVLMCCSRTHTKTSAFLKRHISSSQKLVGLA*ILANIFPPSVLRLAVTVWTKSLWGRLLH*MLKGC*YALVRRQWISLLRTTLNSNYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQQPA  7265

Range 8: 7032 to 7262 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.9 bits(227) 0.0 54/77(70%) 0/77(0%) Plus/Minus
Query       95  RLLKRHFTA**PISSYVLWQRCKTSACPLGLGLLISKGLPH*RLNLEPHTAT*IQSCAQQRDLPPPCQNISAPLQHL  325
                RLLKRH TA*  IS  VL Q+CKTSA PLGL LLISK L  *+LNL  H   *IQSCAQQRD  PP Q+I APLQHL
Subject   7032  RLLKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKELRR*KLNL*LHKVI*IQSCAQQRDPLPPYQSILAPLQHL  7262

Range 9: 6819 to 6971 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.7 bits(148) 0.0 34/51(67%) 0/51(0%) Plus/Minus
Query      386  KRKGICKCSHQTYKFWT**NAPLLEY*YSGTGLKTVHQNPKCLERTSTHQV  538
                +RK ICK S QTYKF T**N PL E *  G G +T HQN K L RTSTHQV
Subject   6819  RRKDICKYSRQTYKFLT**NVPL*EC*CFGMGPRTAHQNLKNLGRTSTHQV  6971

Rupestris stem pitting associated virus 1, complete genome

Sequence ID: NC_001948.1 Length: 8744 Number of Matches: 9

Range 1: 6815 to 7264 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
352.1 bits(762) 0.0 145/150(97%) 0/150(0%) Minus/Plus
Query       93  NILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHRKKLVIMQ*NAFSAAC  542
                NILDEYLSVQD SGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLD VIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHR+KL+IMQ*+AFSAAC
Subject   6815  NILDEYLSVQDFSGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDKVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAAC  7264

Range 2: 7018 to 7263 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
171.1 bits(367) 0.0 74/82(90%) 0/82(0%) Plus/Minus
Query       94  QAAEKAFYCIMTNFFLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPRTSHGNLNSELCATARSTASLPKHISTPSTSRVKGD  339
                QAAEKA YC++ NF LCLVAAM*NQCLSSGVGSLDFKRVTTLKVEP TS GNLNSELCATARSTASLPKHISTPSTS VKGD
Subject   7018  QAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSELCATARSTASLPKHISTPSTSSVKGD  7263

Range 3: 6817 to 6969 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
108.7 bits(231) 0.0 44/51(86%) 0/51(0%) Plus/Minus
Query      388  EERYLQVFTPNLQVLDLMKCASFGILIFWYGSENSTSKPEMS*TDKYSSSM  540
                EERYLQVFTPNLQV DLMKCAS G+L+FWYGSENSTSKPE S TDKYSSS+
Subject   6817  EERYLQVFTPNLQVFDLMKCASLGMLMFWYGSENSTSKPEKSWTDKYSSSI  6969

Range 4: 6815 to 7264 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
243.0 bits(524) 0.0 103/150(69%) 0/150(0%) Plus/Minus
Query       93  AGC*KGILLHNDQFLPMSCGSDVKPVPVLWGWVS*FQKGYHIEG*TSNLTRQLEFRVVRNSEIYRLLAKTYQHPFNI*SEGRSHNDVVQPVAANFKTERGKVFASVHTKPTSFGLNEMRLFWNTDILVRV*KQYIKTRNVLNGQVLIKYV  542
                AGC*KGILLH+ QFLP+SC S+VKPVP+LWGW+S*FQK Y ++ *TSN TR  EFRVVRNSEI+ LL K Y HPFNI* + R HND VQ V AN KTE GK+FAS+H KPTSF L+EM LF N D+LV V +Q+IKT  +L+GQVLIKY+
Subject   6815  AGC*KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVVRNSEIHCLLTKAY*HPFNI*CKRRPHNDFVQTVTANLKTEGGKIFASIHAKPTSF*LDEMCLFRNADVLVWVREQHIKT*KILDGQVLIKYI  7264

Range 5: 7009 to 7275 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
132.6 bits(283) 0.0 56/89(63%) 0/89(0%) Minus/Plus
Query       82  HCGIALHSRC*RGADMFWQGGGRSRCCAQL*IQVAV*GSRFNLQCGNPFEIKRPNPRGQALVLHRCHKT*EEIGHYAVKCLFSSLLLSK  348
                HCG+A ++RC*RGA+M W GG  SRCCAQL*IQ+ +*  RFN    N FEIKR NPRG ALVLH C+KT  EI ++AV+CLFSSL + +
Subject   7009  HCGVAFYTRC*RGANMLW*GGSGSRCCAQL*IQITL*S*RFNF*RRNSFEIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFSSLRIGQ  7275

Range 6: 6817 to 6969 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
74.4 bits(156) 0.0 33/51(65%) 0/51(0%) Minus/Plus
Query      388  HT**VLVRSRHFGF*CTVFRPVPEYQYSKRGAFH*VQNL*VWCEHLQIPFL  540
                +T**VLVR R F F*C V  P+P++Q+S RG FH V+NL*VW E+LQI FL
Subject   6817  YT**VLVRPRFFRF*CAVLGPIPKHQHS*RGTFHQVKNL*VWREYLQISFL  6969

Range 7: 6819 to 7265 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
182.1 bits(391) 0.0 101/149(68%) 0/149(0%) Minus/Plus
Query       92  YLMSTCPFKTFRVLMYCFQTRTRISVFQKRRISLSPKLVGLV*TLANTFPLSVLKLAATGWTTSLWDRPSL*MLKGC*YVXXXXXXXXXXXXXLNSSCRVRFEVQPSMW*PF*NQETQPQRTGTGFTSLPQDIGRNWSLCSKMPFQQPA  538
                YLMSTCP K F+VLM C +T T+ S F KR IS S KLVGL * LAN FP SVL+LA T WT SLW R   *MLKGC*Y L RR+ ISLLRTTLNS+  V+ EVQ    * F*NQE QPQR GTGFT L QD GRN   CSKMPFQQPA
Subject   6819  YLMSTCPSKIFQVLMCCSRTHTKTSAFLKRHISSSQKLVGLA*ILANIFPPSVLRLAVTVWTKSLWGRLLH*MLKGC*YALVRRQWISLLRTTLNSNYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQQPA  7265

Range 8: 7032 to 7262 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.9 bits(227) 0.0 54/77(70%) 0/77(0%) Plus/Minus
Query       95  RLLKRHFTA**PISSYVLWQRCKTSACPLGLGLLISKGLPH*RLNLEPHTAT*IQSCAQQRDLPPPCQNISAPLQHL  325
                RLLKRH TA*  IS  VL Q+CKTSA PLGL LLISK L  *+LNL  H   *IQSCAQQRD  PP Q+I APLQHL
Subject   7032  RLLKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKELRR*KLNL*LHKVI*IQSCAQQRDPLPPYQSILAPLQHL  7262

Range 9: 6819 to 6971 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.7 bits(148) 0.0 34/51(67%) 0/51(0%) Plus/Minus
Query      386  KRKGICKCSHQTYKFWT**NAPLLEY*YSGTGLKTVHQNPKCLERTSTHQV  538
                +RK ICK S QTYKF T**N PL E *  G G +T HQN K L RTSTHQV
Subject   6819  RRKDICKYSRQTYKFLT**NVPL*EC*CFGMGPRTAHQNLKNLGRTSTHQV  6971

Nucleotide Sequence (350 letters)

Query ID:ds2016-58_48
Query definition:No definition line
Query length:589
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 13 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
35
70
105
140
175
210
245
280
315
350

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate TEMP BR replicase, 24.4 kDa protein, 12.8 kDa protein, 8.4 kDa protein, and 28 kDa protein genes, complete cds

Sequence ID: KX925556.1 Length: 8700 Number of Matches: 6

Range 1: 5210 to 5530 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
254.9 bits(550) 0.0 104/107(97%) 0/107(0%) Plus/Plus
Query        1  ESTRARWVGKMALKEHREVRCGHETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH  321
                ESTRARWVGKMALKEHREVRCGHE TQQFFDEHRGG GEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLD+FLSKVPLNASH
Subject   5210  ESTRARWVGKMALKEHREVRCGHEVTQQFFDEHRGGAGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKVPLNASH  5530

Range 2: 5212 to 5526 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.0 bits(417) 0.0 82/105(78%) 0/105(0%) Minus/Minus
Query        3  LAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPMPPLCSSKNC*VVSCPHRTSRCSFKAIFPTHLALVD  317
                LAF+GT DRK SS+NFP GFARL+ AAST GFEN +RFRTA++KVMES PLCLG*MLS  S ALL+CSP PPLCSSKNC V S P RTSRCSFKAI PTHLALVD
Subject   5212  LAFSGTLDRKESSKNFPYGFARLNLAASTWGFENLRRFRTAMRKVMESFPLCLG*MLSNLSHALLSCSPAPPLCSSKNCCVTSWPQRTSRCSFKAILPTHLALVD  5526

Range 3: 5210 to 5536 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.4 bits(215) 0.0 50/109(46%) 0/109(0%) Minus/Minus
Query        1  G*VASIQWDF**ESVEQEFSVRLCTPQLRSFHLWL*KL*AFSDGH*KSDGVITLMSRINALKTFTSIAQLLTHAPPVFIKELLSCLMPTSYLTMLFQSHFPNPSSPG*L  327
                G V  I W+   E ++ E  +  C PQ   F+L L*K   FS+ H +  G+I+ M  +NA K+FT IAQLLT    V IKELL  LM T++L MLF  HF +P   G*L
Subject   5210  GIVTGI*WNLRQEGIQ*ELPIWFCPPQFGRFNLGL*KFETFSNSHEEGYGIISFMPWVNAFKSFTCIAQLLTSTTSVLIKELLRYLMATAHLPMLF*GHFAHPPGSG*L  5536

Range 4: 5211 to 5468 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.3 bits(193) 0.0 42/86(49%) 0/86(0%) Minus/Minus
Query        2  LHASASQLPPVALKTLSVFGRPLKK*WSHYPYV*DKCSQNVHKHCSIAHPCPPCVHQRIAELSHAHIVPHDALSKPFSQPI*PWLT  259
                L AS   L P ALK   VF +P  + W+H+ Y   KC Q  H HCS AH    C HQRIA L H H  P DAL +PF  P   WLT
Subject   5211  LPASIWPLQPGALKI*DVFEQP*GRLWNHFLYALGKCFQIFHMHCSAAHQHHLCAHQRIAALPHGHSAPPDALLRPFCPPTWLWLT  5468

Range 5: 5212 to 5523 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.5 bits(165) 0.0 44/104(42%) 0/104(0%) Plus/Plus
Query        3  VNQG*MGWENGFERAS*GTMWA*DNSAIL**TQGGHG*AIEQCL*TF*EHLS*T*G**LHHFFNGRPKTLKVFKATGGSCEAEACKALRKIPARHFPIKSPIEC  314
                VNQ  +G +NG +RAS G +W * N+AIL** Q    *A EQC+*  *+HL   *  * H+  +G  KT ++FKA G S + EA K + ++     P+    +C
Subject   5212  VNQSQVGGQNGLKRASGGALWP*GNAAIL**AQRWCW*AAEQCM*KI*KHLPKA*RK*FHNLPHGCSKTSQIFKAPG*SGQIEAGKTIWEVLTGFLPV*GSTKC  5523

Range 6: 5211 to 5537 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.5 bits(154) 0.0 50/109(46%) 0/109(0%) Plus/Plus
Query        2  SQPGLDGLGKWL*KSIVRYDVGMRQLSNSLMNTGGAWVSN*AMLVNVLRAFILDIRVMTPSLF*WPSENA*SFQSHRWKLRS*GVQSLTENSCSTLSYQKSH*MLATYP  328
                SQP   G  KW *KSI R  V MR  SNSLM+T    VS+*AM V  L+AF   I+ M P    W  EN  +FQS R K  +*G Q+   +S    S  + H*M  T P
Subject   5211  SQPEPGGWAKWP*KSIGRCAVAMR*RSNSLMSTEVVLVSS*AMHVKDLKAFTQGIKEMIP*PSSWLFENVSNFQSPRLKRPN*GGQNHMGSSYWIPSCLRFH*MPVTIP  5537

Grapevine rupestris stem pitting associated virus isolate VF1, partial genome

Sequence ID: KT948710.1 Length: 8716 Number of Matches: 6

Range 1: 5222 to 5542 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
254.0 bits(548) 0.0 104/107(97%) 0/107(0%) Plus/Plus
Query        1  ESTRARWVGKMALKEHREVRCGHETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH  321
                ESTRARWVGKMALKE+REVRCG+ETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPL+ASH
Subject   5222  ESTRARWVGKMALKEYREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLSASH  5542

Range 2: 5224 to 5541 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
240.3 bits(518) 0.0 101/106(95%) 0/106(0%) Minus/Minus
Query        3  WLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPMPPLCSSKNC*VVSCPHRTSRCSFKAIFPTHLALVD  320
                WLA NGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKV+ESLPLCLG*MLSKRSQALLNCSP+PPLCSSKNC*VVS PHRTSR SFKAIFPTHLALVD
Subject   5224  WLALNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVIESLPLCLG*MLSKRSQALLNCSPIPPLCSSKNC*VVSYPHRTSRYSFKAIFPTHLALVD  5541

Range 3: 5223 to 5540 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
209.1 bits(450) 0.0 86/106(81%) 0/106(0%) Minus/Minus
Query        2  G*HSMGLLIGKCRAGIFRKALHASASQLPPVALKTLSVFGRPLKK*WSHYPYV*DKCSQNVHKHCSIAHPCPPCVHQRIAELSHAHIVPHDALSKPFSQPI*PWLT  319
                G*H MGLLIG+C+AGI  KALHA ASQLPPVAL+T SV GRP K+* SH PYV*DKCSQNVHKHCSIA P PPCVH+RIAELSH HIVPH  LS+PFSQPI*PWLT
Subject   5223  G*HLMGLLIGRCQAGISHKALHALASQLPPVALRTSSVSGRPSKR**SHCPYV*DKCSQNVHKHCSIARPSPPCVHRRIAELSHTHIVPHGTLSRPFSQPI*PWLT  5540

Range 4: 5223 to 5549 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
206.8 bits(445) 0.0 93/109(85%) 0/109(0%) Plus/Plus
Query        2  SQPGLDGLGKWL*KSIVRYDVGMRQLSNSLMNTGGAWVSN*AMLVNVLRAFILDIRVMTPSLF*WPSENA*SFQSHRWKLRS*GVQSLTENSCSTLSYQKSH*MLATYP  328
                SQPGLDGLGKW *KS VRYDVGMRQLSNS MNTGG W SN*AMLVNVLRAFILDIR MT S F*WPS NA*S QSHRWKLRS*GVQSL  NSC T SYQKSH*+LAT P
Subject   5223  SQPGLDGLGKWP*KSTVRYDVGMRQLSNSSMNTGGGWASN*AMLVNVLRAFILDIRAMTLSPF*WPSGNA*SSQSHRWKLRS*GVQSLMGNSCLTPSYQKSH*VLATIP  5549

Range 5: 5222 to 5548 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
202.2 bits(435) 0.0 88/109(81%) 0/109(0%) Minus/Minus
Query        1  G*VASIQWDF**ESVEQEFSVRLCTPQLRSFHLWL*KL*AFSDGH*KSDGVITLMSRINALKTFTSIAQLLTHAPPVFIKELLSCLMPTSYLTMLFQSHFPNPSSPG*L  327
                G VAS  WDF**E V+QEF +RLCTP LRSFHLWL*+L AF DGH K D VI LMSRINALKTFTSIAQLL H PPVFI+ELLSCL+PTSYLT+LFQ HFPNPSSPG*L
Subject   5222  GIVAST*WDF**EGVKQEFPIRLCTP*LRSFHLWL*ELQAFPDGHQKGDRVIALMSRINALKTFTSIAQLLAHPPPVFIEELLSCLIPTSYLTVLFQGHFPNPSSPG*L  5548

Range 6: 5224 to 5541 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.0 bits(417) 0.0 86/106(81%) 0/106(0%) Plus/Plus
Query        3  VNQG*MGWENGFERAS*GTMWA*DNSAIL**TQGGHG*AIEQCL*TF*EHLS*T*G**LHHFFNGRPKTLKVFKATGGSCEAEACKALRKIPARHFPIKSPIEC*P  320
                VNQG*MGWENG ER  *GTMW *DNSAIL *TQGG G AIEQCL*TF*EHLS*T*G *L+H F+GRP+TL+V KATGGSCEA+ACKAL +IPA H PIKSPI+C*P
Subject   5224  VNQG*MGWENGLERVP*GTMWV*DNSAILR*TQGGDGRAIEQCL*TF*EHLS*T*GQ*LYHLFDGRPETLEVLKATGGSCEAKACKALWEIPA*HLPIKSPIKC*P  5541

Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome

Sequence ID: KR054734.1 Length: 8753 Number of Matches: 6

Range 1: 5221 to 5541 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
259.0 bits(559) 0.0 106/107(99%) 0/107(0%) Plus/Plus
Query        1  ESTRARWVGKMALKEHREVRCGHETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH  321
                ESTRARWVGKMALKEHREVRCG+ETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH
Subject   5221  ESTRARWVGKMALKEHREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH  5541

Range 2: 5223 to 5540 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
237.0 bits(511) 0.0 99/106(93%) 0/106(0%) Minus/Minus
Query        3  WLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPMPPLCSSKNC*VVSCPHRTSRCSFKAIFPTHLALVD  320
                WLAFNGTFD+ VSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLS  SQALLNCSP+PPLCSSKNC*VVS P RTSRCSFKAIFPTHLALVD
Subject   5223  WLAFNGTFDKNVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSNLSQALLNCSPIPPLCSSKNC*VVSYPQRTSRCSFKAIFPTHLALVD  5540

Range 3: 5221 to 5541 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
179.3 bits(385) 0.0 76/107(71%) 0/107(0%) Minus/Minus
Query        1  VASIQWDF**ESVEQEFSVRLCTPQLRSFHLWL*KL*AFSDGH*KSDGVITLMSRINALKTFTSIAQLLTHAPPVFIKELLSCLMPTSYLTMLFQSHFPNPSSPG*L  321
                VASIQW+F* + V+Q+FS+RLC P L S HLWL*KL*   D H*KSDG+ITLMSR+NA K+FTSIA LL H P VFI+ELLSCL+P ++LT+LFQ HFP+PSSPG*L
Subject   5221  VASIQWNF*QKCVKQKFSIRLCAP*LCSLHLWL*KL*TLPDSH*KSDGIITLMSRVNAFKSFTSIA*LLAHTPSVFIEELLSCLIPATHLTVLFQGHFPDPSSPG*L  5541

Range 4: 5222 to 5539 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
168.3 bits(361) 0.0 72/106(68%) 0/106(0%) Minus/Minus
Query        2  G*HSMGLLIGKCRAGIFRKALHASASQLPPVALKTLSVFGRPLKK*WSHYPYV*DKCSQNVHKHCSIAHPCPPCVHQRIAELSHAHIVPHDALSKPFSQPI*PWLT  319
                G*HSM LL   C+A IF KAL A A Q P VALKTL+  G+PLKK*W+HYPYV* KC Q  HKHC IA P P CVH+R AELSH    PH ALS+PFS+PI*PWLT
Subject   5222  G*HSMELLTKMCQAEIFHKALRALALQPPLVALKTLNASGQPLKK*WNHYPYV*GKCFQIFHKHCLIARPYPLCVHRRTAELSHTRNAPHGALSRPFSRPI*PWLT  5539

Range 5: 5222 to 5542 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
163.7 bits(351) 0.0 76/107(71%) 0/107(0%) Plus/Plus
Query        2  SQPGLDGLGKWL*KSIVRYDVGMRQLSNSLMNTGGAWVSN*AMLVNVLRAFILDIRVMTPSLF*WPSENA*SFQSHRWKLRS*GVQSLTENSCSTLSYQKSH*MLAT  322
                SQPGLDG GKW *KS VR   GMRQLS+S MNT G W SN*AMLV  L+AF LDIRVM PSLF*W S + *SFQSH+W+L+S*G QSL EN C T   QK H*MLAT
Subject   5222  SQPGLDGSGKWP*KSTVRCVAGMRQLSSSSMNTEGVWASN*AMLVKDLKAFTLDIRVMIPSLF*WLSGSV*SFQSHKWRLQS*GAQSLMENFCLTHFCQKFH*MLAT  5542

Range 6: 5223 to 5540 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
149.1 bits(319) 0.0 72/106(68%) 0/106(0%) Plus/Plus
Query        3  VNQG*MGWENGFERAS*GTMWA*DNSAIL**TQGGHG*AIEQCL*TF*EHLS*T*G**LHHFFNGRPKTLKVFKATGGSCEAEACKALRKIPARHFPIKSPIEC*P  320
                VNQG*MG ENG ERA *G +  *DNSA+L *TQ G+G AI+QCL*  *+HL *T*G** HHFFNG P+  KVFKAT G C+A+A KAL KI A H  +KS IEC*P
Subject   5223  VNQG*MGRENGLERAP*GALRV*DNSAVLR*TQRGYGRAIKQCL*KI*KHLP*T*G**FHHFFNGCPEAFKVFKATSGGCKAKARKALWKISA*HIFVKSSIEC*P  5540

Grapevine rupestris stem pitting associated virus isolate CS BR, complete genome

Sequence ID: KX958435.1 Length: 8743 Number of Matches: 6

Range 1: 5222 to 5542 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
259.0 bits(559) 0.0 106/107(99%) 0/107(0%) Plus/Plus
Query        1  ESTRARWVGKMALKEHREVRCGHETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH  321
                ESTRARWVGKMALKEHREVRCG+ETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH
Subject   5222  ESTRARWVGKMALKEHREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH  5542

Range 2: 5224 to 5541 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
248.5 bits(536) 0.0 103/106(97%) 0/106(0%) Minus/Minus
Query        3  WLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPMPPLCSSKNC*VVSCPHRTSRCSFKAIFPTHLALVD  320
                WLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENF+RFRTAIKKVMESLPLCLG*MLSKRSQALLNCSP+PPLCSSKNC*VVS PHRTSRCSFKAIFPTHLALVD
Subject   5224  WLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFRRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPIPPLCSSKNC*VVSYPHRTSRCSFKAIFPTHLALVD  5541

Range 3: 5223 to 5543 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
205.9 bits(443) 0.0 90/107(84%) 0/107(0%) Plus/Plus
Query        2  SQPGLDGLGKWL*KSIVRYDVGMRQLSNSLMNTGGAWVSN*AMLVNVLRAFILDIRVMTPSLF*WPSENA*SFQSHRWKLRS*GVQSLTENSCSTLSYQKSH*MLAT  322
                SQPGLDGLGKW *+S VRYDVGM+QLSNS MNTGG W SN*AM VNVL+AFILD R MTP  F*WPSENA*SFQSHRWKLRS*GVQSL  NSC TLSY+KSH*MLAT
Subject   5223  SQPGLDGLGKWP*RSTVRYDVGMKQLSNSSMNTGGEWASN*AMPVNVLKAFILDTRAMTPLPF*WPSENA*SFQSHRWKLRS*GVQSLMGNSCLTLSYRKSH*MLAT  5543

Range 4: 5223 to 5540 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
205.0 bits(441) 0.0 84/106(79%) 0/106(0%) Minus/Minus
Query        2  G*HSMGLLIGKCRAGIFRKALHASASQLPPVALKTLSVFGRPLKK*WSHYPYV*DKCSQNVHKHCSIAHPCPPCVHQRIAELSHAHIVPHDALSKPFSQPI*PWLT  319
                G*H MGL IGKC+AGI  KALHA ASQLPPVALKT  VFGRPLK+*WSH P V*DKC QNVH+HC IA P PPCVH+RIAEL H HIVPH A S+PFSQPI*PWLT
Subject   5223  G*HLMGLSIGKCQAGISHKALHALASQLPPVALKTSGVFGRPLKR*WSHCPCV*DKCFQNVHRHCLIARPFPPCVHRRIAELFHTHIVPHGAPSRPFSQPI*PWLT  5540

Range 5: 5222 to 5542 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
197.6 bits(425) 0.0 85/107(79%) 0/107(0%) Minus/Minus
Query        1  VASIQWDF**ESVEQEFSVRLCTPQLRSFHLWL*KL*AFSDGH*KSDGVITLMSRINALKTFTSIAQLLTHAPPVFIKELLSCLMPTSYLTMLFQSHFPNPSSPG*L  321
                VASI WDF *ESV+QEF +RLCTP LRSFHLWL*KL AFSDGH*K +GVI L+SRINA KTFT IA LL H+PPVFI+ELLSC +PTSYLT+L Q HFPNPSSPG*L
Subject   5222  VASI*WDFR*ESVKQEFPIRLCTP*LRSFHLWL*KLQAFSDGH*KGNGVIALVSRINAFKTFTGIA*LLAHSPPVFIEELLSCFIPTSYLTVLLQGHFPNPSSPG*L  5542

Range 6: 5224 to 5541 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
189.8 bits(408) 0.0 84/106(79%) 0/106(0%) Plus/Plus
Query        3  VNQG*MGWENGFERAS*GTMWA*DNSAIL**TQGGHG*AIEQCL*TF*EHLS*T*G**LHHFFNGRPKTLKVFKATGGSCEAEACKALRKIPARHFPIKSPIEC*P  320
                VNQG*MGWENG E A *GTMW *+NSAIL *TQGG+G AI+QCL*TF*+HLS*T G *LH+ FNGRPKT +VFKATGGSCEA+ACKAL +IPA HFPI+SPI+C*P
Subject   5224  VNQG*MGWENGLEGAP*GTMWV*NNSAILR*TQGGNGRAIKQCL*TF*KHLS*TQGQ*LHYLFNGRPKTPEVFKATGGSCEAKACKALWEIPA*HFPIESPIKC*P  5541

Grapevine rupestris stem pitting associated virus isolate SK704 A, complete genome

Sequence ID: KX274274.1 Length: 8725 Number of Matches: 6

Range 1: 5221 to 5541 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
254.0 bits(548) 0.0 104/107(97%) 0/107(0%) Plus/Plus
Query        1  ESTRARWVGKMALKEHREVRCGHETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH  321
                ESTRARWVGKMALKE+REVRCG+E TQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH
Subject   5221  ESTRARWVGKMALKEYREVRCGYEATQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH  5541

Range 2: 5222 to 5539 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
248.5 bits(536) 0.0 98/106(92%) 0/106(0%) Minus/Minus
Query        2  G*HSMGLLIGKCRAGIFRKALHASASQLPPVALKTLSVFGRPLKK*WSHYPYV*DKCSQNVHKHCSIAHPCPPCVHQRIAELSHAHIVPHDALSKPFSQPI*PWLT  319
                G*HSMGLLIGKCRAGIFRKALHA ASQLPPVALKT SVFGRPLK+*WSHYPYV*DKCSQN HKHCSIAHPCPPCVH+RIAEL H HIVPHD LSKPFSQPI*PWLT
Subject   5222  G*HSMGLLIGKCRAGIFRKALHALASQLPPVALKTSSVFGRPLKR*WSHYPYV*DKCSQNAHKHCSIAHPCPPCVHRRIAELPHTHIVPHDTLSKPFSQPI*PWLT  5539

Range 3: 5223 to 5540 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
244.8 bits(528) 0.0 103/106(97%) 0/106(0%) Minus/Minus
Query        3  WLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPMPPLCSSKNC*VVSCPHRTSRCSFKAIFPTHLALVD  320
                WLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPMPPLCSSKNC*V S PHRTSR SFKAIFPTHLALVD
Subject   5223  WLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPMPPLCSSKNC*VASYPHRTSRYSFKAIFPTHLALVD  5540

Range 4: 5222 to 5542 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
238.0 bits(513) 0.0 104/107(97%) 0/107(0%) Plus/Plus
Query        2  SQPGLDGLGKWL*KSIVRYDVGMRQLSNSLMNTGGAWVSN*AMLVNVLRAFILDIRVMTPSLF*WPSENA*SFQSHRWKLRS*GVQSLTENSCSTLSYQKSH*MLAT  322
                SQPGLDGLGKWL*KSIVRYDVGMRQLSNS MNTGGAWVSN*AMLV+VLRAFILDIRVMTPS F*WPSENA*SFQSHRWKLRS*GVQSLTENSCSTLSYQKSH*MLAT
Subject   5222  SQPGLDGLGKWL*KSIVRYDVGMRQLSNSSMNTGGAWVSN*AMLVSVLRAFILDIRVMTPSPF*WPSENA*SFQSHRWKLRS*GVQSLTENSCSTLSYQKSH*MLAT  5542

Range 5: 5221 to 5541 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
230.2 bits(496) 0.0 100/107(93%) 0/107(0%) Minus/Minus
Query        1  VASIQWDF**ESVEQEFSVRLCTPQLRSFHLWL*KL*AFSDGH*KSDGVITLMSRINALKTFTSIAQLLTHAPPVFIKELLSCLMPTSYLTMLFQSHFPNPSSPG*L  321
                VASIQWDF**ESVEQEFSVRLCTP LRSFHLWL*KL AFSDGH*K DGVITLMSRINALKT TSIAQLLTHAPPVFI+ELLSCL+PTSYLT+LFQSHFPNPSSPG*L
Subject   5221  VASIQWDF**ESVEQEFSVRLCTP*LRSFHLWL*KLQAFSDGH*KGDGVITLMSRINALKTLTSIAQLLTHAPPVFIEELLSCLIPTSYLTILFQSHFPNPSSPG*L  5541

Range 6: 5223 to 5540 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
226.0 bits(487) 0.0 98/106(92%) 0/106(0%) Plus/Plus
Query        3  VNQG*MGWENGFERAS*GTMWA*DNSAIL**TQGGHG*AIEQCL*TF*EHLS*T*G**LHHFFNGRPKTLKVFKATGGSCEAEACKALRKIPARHFPIKSPIEC*P  320
                VNQG*MGWENGFER S*GTMW * NSAIL *TQGGHG*AIEQCL* F*EHLS*T*G**LHH FNGRPKTL+VFKATGGSCEA+ACKALRKIPARHFPIKSPIEC*P
Subject   5223  VNQG*MGWENGFERVS*GTMWV*GNSAILR*TQGGHG*AIEQCL*AF*EHLS*T*G**LHHLFNGRPKTLEVFKATGGSCEAKACKALRKIPARHFPIKSPIEC*P  5540

Nucleotide Sequence (483 letters)

Query ID:ds2016-58_48
Query definition:No definition line
Query length:589
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 13 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
49
98
147
196
245
294
343
392
441
483

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 7

Range 1: 757 to 1203 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
360.3 bits(780) 0.0 149/149(100%) 0/149(0%) Plus/Plus
Query        2  MLFAPDGNWCEMYSQPLSSRYLLKARSVVLSDGSRYAVDVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL  448
                MLFAPDGNWCEMYSQPLSSRYLLKARSVVLSDGSRYAVDVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL
Subject    757  MLFAPDGNWCEMYSQPLSSRYLLKARSVVLSDGSRYAVDVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL  1203

Range 2: 756 to 1202 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
338.8 bits(733) 0.0 148/149(99%) 0/149(0%) Minus/Minus
Query        1  SREPLLPQLMTSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCIPRLRGSRSLMPMASKPEKHRMLETRRLLIGVKLNK*WQNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKSI  447
                SREPLLPQLMTSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCIPRLRGSRSLMPMASKPEKHRMLET+RLLIGVKLNK*WQNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKSI
Subject    756  SREPLLPQLMTSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCIPRLRGSRSLMPMASKPEKHRMLETKRLLIGVKLNK*WQNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKSI  1202

Range 3: 756 to 1202 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
331.9 bits(718) 0.0 143/149(96%) 0/149(0%) Plus/Plus
Query        1  NALCSGW*LV*NVFTTIVK*VFA*S*ISGLI*WFTLCGRCPPFKILPSLIELHPNQ*SSSF*HSVFLWF*RHRH*GSGASKSRYA*LLSGAS*CCY*NISLFENPQKT**GICRGEIASAYRQAYWKGD*IH*GFCFTCHKLWKKWLSA  447
                NALCSGW*LV*NVFTTIVK*VFA*S*I GLI*WFTLCGRCPPFKILPSLIELHPNQ*S SF*HSVFLWF*RHRH*GSGASKSRYA*LLSGAS*CCY*NISLFENPQK ** ICRGEIASAYRQ  WKGD*IH*GFCFTCHKLWKKWLSA
Subject    756  NALCSGW*LV*NVFTTIVK*VFA*S*ICGLI*WFTLCGRCPPFKILPSLIELHPNQ*SFSF*HSVFLWF*RHRH*GSGASKSRYA*LLSGAS*CCY*NISLFENPQKA**RICRGEIASAYRQTNWKGD*IH*GFCFTCHKLWKKWLSA  1202

Range 4: 758 to 1201 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
330.5 bits(715) 0.0 142/148(96%) 0/148(0%) Minus/Minus
Query        3  AESHFFHNL*QVKQNPQ*I*SPFQ*ACR*ADAISPRQIPYQVF*GFSNKDIF**QHHDAPESSYAYRDLEAPDP*CRWRQNQRNTEC*KLEDY*LG*SSISDGRILNGGHRPHSVNHQIRPLI*L*ANTYLTMVVNTFHTSYHPEQRA  446
                AESHFFHNL*QVKQNPQ*I*SPFQ  CR*ADAISPRQI YQ F*GFSNKDIF**QHHDAPESSYAYRDLEAPDP*CRWRQNQRNTEC*KL+DY*LG*SSISDGRILNGGHRPHSVNHQIRP I*L*ANTYLTMVVNTFHTSYHPEQRA
Subject    758  AESHFFHNL*QVKQNPQ*I*SPFQLVCR*ADAISPRQILYQAF*GFSNKDIF**QHHDAPESSYAYRDLEAPDP*CRWRQNQRNTEC*KLKDY*LG*SSISDGRILNGGHRPHSVNHQIRPQI*L*ANTYLTMVVNTFHTSYHPEQRA  1201

Range 5: 758 to 1201 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
327.3 bits(708) 0.0 143/148(97%) 0/148(0%) Plus/Plus
Query        3  CSLLRMVTGVKCIHNHCQVGICLKLDQWSYLMVHAMRSMSSIQNSAITY*ASPQSIIF*FLTFGVSLVLTPSALRIWSL*VAVCIAAFRCIMMLLLKYIFI*EPSKNLIRNLPRRNCVSLSTSLLEGRLNSLRILLHLS*VVEEVALC  446
                CSLLRMVTGVKCIHNHCQVGICLKLD WSYLMVHAMRSMSSIQNSAITY*ASPQSIIF*FLTFGVSLVLTPSALRIWSL*VAVCIAAFRCIMMLLLKYIFI*EPSK+LI+NLPRRNCVSLST+ LEGRLNSLRILLHLS*VVEEVALC
Subject    758  CSLLRMVTGVKCIHNHCQVGICLKLDLWSYLMVHAMRSMSSIQNSAITY*ASPQSIIF*FLTFGVSLVLTPSALRIWSL*VAVCIAAFRCIMMLLLKYIFI*EPSKSLIKNLPRRNCVSLSTNQLEGRLNSLRILLHLS*VVEEVALC  1201

Range 6: 877 to 1200 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
234.8 bits(506) 0.0 104/108(96%) 0/108(0%) Minus/Minus
Query      122  QRATSSTTYDK*SKILNEFNLPSSRLVDKLTQFRLGRFLIRFFEGSQIKIYFSNNIMMHRKAAMHTAT*RLQILNADGVKTRETPNVRN*KIIDWGEAQ*VMAEF*ME  445
                QRATSSTTYDK*SKILNEFNLPSS  VDKLTQFRLGRF IR FEGSQIKIYFSNNIMMHRKAAMHTAT*RLQILNADGVKTRETPNVRN*KIIDWGEAQ*VMAEF*ME
Subject    877  QRATSSTTYDK*SKILNEFNLPSSWFVDKLTQFRLGRFFIRLFEGSQIKIYFSNNIMMHRKAAMHTAT*RLQILNADGVKTRETPNVRN*KIIDWGEAQ*VMAEF*ME  1200

Range 7: 757 to 840 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
65.2 bits(136) 0.0 27/28(96%) 0/28(0%) Minus/Minus
Query        2  H*SSFKQIPT*QWL*IHFTPVTIRSKEH  85
                H SSFKQIPT*QWL*IHFTPVTIRSKEH
Subject    757  HRSSFKQIPT*QWL*IHFTPVTIRSKEH  840

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 7

Range 1: 757 to 1203 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
353.9 bits(766) 0.0 146/149(98%) 0/149(0%) Plus/Plus
Query        2  MLFAPDGNWCEMYSQPLSSRYLLKARSVVLSDGSRYAVDVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL  448
                MLFAPDGNWCEMYSQPLSSRYLLKA+SVVLSDGSRYAVDVLHSKFCHHLLSFTPI+NLLVSNIRCFSGFDAIGIKDLEPL RGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL
Subject    757  MLFAPDGNWCEMYSQPLSSRYLLKAKSVVLSDGSRYAVDVLHSKFCHHLLSFTPISNLLVSNIRCFSGFDAIGIKDLEPLIRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL  1203

Range 2: 756 to 1202 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
333.7 bits(722) 0.0 145/149(97%) 0/149(0%) Minus/Minus
Query        1  SREPLLPQLMTSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCIPRLRGSRSLMPMASKPEKHRMLETRRLLIGVKLNK*WQNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKSI  447
                SREPLLPQL+TSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLC+PR+RGSRSLMPMASKPEKHRMLETRRLLIGVKLNK WQNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKSI
Subject    756  SREPLLPQLITSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRIRGSRSLMPMASKPEKHRMLETRRLLIGVKLNKWWQNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKSI  1202

Range 3: 758 to 1201 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
285.6 bits(617) 0.0 128/148(86%) 0/148(0%) Minus/Minus
Query        3  AESHFFHNL*QVKQNPQ*I*SPFQ*ACR*ADAISPRQIPYQVF*GFSNKDIF**QHHDAPESSYAYRDLEAPDP*CRWRQNQRNTEC*KLEDY*LG*SSISDGRILNGGHRPHSVNHQIRPLI*L*ANTYLTMVVNTFHTSYHPEQRA  446
                A SHFFHNL*Q KQN Q*I*S  Q*ACR*ADAISPRQIPYQ F* FSN+ IF**QHHD PESSYA R+LEAPD *CRWRQN+RNTEC*K EDY*LG*SSIS GRILNG HRPHSVNH IRP I L*ANTYLTMVVNTFHTSYHPEQRA
Subject    758  AGSHFFHNL*QAKQNLQ*I*SLSQ*ACR*ADAISPRQIPYQAF*EFSNRGIF**QHHDVPESSYACRELEAPDL*CRWRQNRRNTEC*KPEDY*LG*SSISGGRILNGEHRPHSVNHPIRPQIWL*ANTYLTMVVNTFHTSYHPEQRA  1201

Range 4: 756 to 1202 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
281.9 bits(609) 0.0 126/149(85%) 0/149(0%) Plus/Plus
Query        1  NALCSGW*LV*NVFTTIVK*VFA*S*ISGLI*WFTLCGRCPPFKILPSLIELHPNQ*SSSF*HSVFLWF*RHRH*GSGASKSRYA*LLSGAS*CCY*NISLFENPQKT**GICRGEIASAYRQAYWKGD*IH*GFCFTCHKLWKKWLSA  447
                NALCSGW*LV*NVFTTIVK*VFA*S I GLI WFTLCGRC PFKILP LIEL+PN *SS F*HSVFL F*RHRH* SGAS SR+A*LLSG S*CCY*NI LFEN  K **GICRGEIASAYRQAYW+ D*IH* FCF C+KLWKKWL A
Subject    756  NALCSGW*LV*NVFTTIVK*VFA*SQICGLIGWFTLCGRCSPFKILPPLIELYPN**SSGF*HSVFLRF*RHRH*RSGASNSRHA*LLSGTS*CCY*NIPLFENS*KA**GICRGEIASAYRQAYWERD*IH*RFCFACYKLWKKWLPA  1202

Range 5: 758 to 1201 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
266.4 bits(575) 0.0 122/148(82%) 0/148(0%) Plus/Plus
Query        3  CSLLRMVTGVKCIHNHCQVGICLKLDQWSYLMVHAMRSMSSIQNSAITY*ASPQSIIF*FLTFGVSLVLTPSALRIWSL*VAVCIAAFRCIMMLLLKYIFI*EPSKNLIRNLPRRNCVSLSTSLLEGRLNSLRILLHLS*VVEEVALC  446
                CSLLRMVTGVKCIHNHCQVGICLK + WSY MVHAMRSM SIQNSA TY*A PQ +IF FLTFGVS VLTPSAL+IWSL* A CIAAFR IMMLLLKY  I*E  K+LIRNLPRRNCVSLSTSLL  RLNSL+ILL L *VVEEVA C
Subject    758  CSLLRMVTGVKCIHNHCQVGICLKPNLWSYRMVHAMRSMFSIQNSATTY*ALPQLVIFWFLTFGVSPVLTPSALKIWSL*FAACIAAFRYIMMLLLKYTSI*ELLKSLIRNLPRRNCVSLSTSLLGERLNSLKILLRLL*VVEEVAPC  1201

Range 6: 877 to 1200 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
196.7 bits(423) 0.0 87/108(81%) 0/108(0%) Minus/Minus
Query      122  QRATSSTTYDK*SKILNEFNLPSSRLVDKLTQFRLGRFLIRFFEGSQIKIYFSNNIMMHRKAAMHTAT*RLQILNADGVKTRETPNVRN*KIIDWGEAQ*VMAEF*ME  445
                Q ATSSTTY+K SKI NEFNL  SRLVDKLTQFRLGRFLIR F+ SQI++YFSNNIMM+RKAAMH A *RLQI NADGVKT ETPNVRN KI +WG+AQ*V+AEF*ME
Subject    877  QGATSSTTYNKRSKIFNEFNLSPSRLVDKLTQFRLGRFLIRLFKSSQIEVYFSNNIMMYRKAAMHAAN*RLQIFNADGVKTGETPNVRNQKITNWGKAQ*VVAEF*ME  1200

Range 7: 757 to 840 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
60.6 bits(126) 0.0 25/28(89%) 0/28(0%) Minus/Minus
Query        2  H*SSFKQIPT*QWL*IHFTPVTIRSKEH  85
                H   FKQIPT*QWL*IHFTPVTIRSKEH
Subject    757  HRFGFKQIPT*QWL*IHFTPVTIRSKEH  840

Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome

Sequence ID: JX559646.1 Length: 8726 Number of Matches: 7

Range 1: 757 to 1203 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
338.8 bits(733) 0.0 138/149(93%) 0/149(0%) Plus/Plus
Query        2  MLFAPDGNWCEMYSQPLSSRYLLKARSVVLSDGSRYAVDVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL  448
                +LFAPDGNW EMYSQPLS RYLLKARSVVL DGSRY+VD++HSKFCHHLLSFTPI NLL SN+RCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDF+SLVISCGRSGSLL
Subject    757  LLFAPDGNWNEMYSQPLSCRYLLKARSVVLPDGSRYSVDIIHSKFCHHLLSFTPIGNLLTSNMRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFSSLVISCGRSGSLL  1203

Range 2: 759 to 1202 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
272.3 bits(588) 0.0 121/148(82%) 0/148(0%) Minus/Minus
Query        4  SREPLLPQLMTSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCIPRLRGSRSLMPMASKPEKHRMLETRRLLIGVKLNK*WQNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKS  447
                S+EPLLPQL+T+E KSSMN ISLPVGLSIS*R+FASADSLSGFLRVLK*RYILVTTS*CTGKQLC+PRLRGSRS MP+ASKPEKH M E +RL +GVKL+K WQNFE   ST *REPS  TTDLA SKYL D GCEYIS QLPSGAKS
Subject    759  SKEPLLPQLITNEEKSSMNFISLPVGLSIS*RSFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSRSFMPIASKPEKHLMFEVKRLPMGVKLSKWWQNFE*MISTE*REPSGSTTDLAFSKYLHDKGCEYISFQLPSGAKS  1202

Range 3: 759 to 1205 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
120.2 bits(256) 0.0 66/149(44%) 0/149(0%) Plus/Plus
Query        4  ALCSGW*LV*NVFTTIVK*VFA*S*ISGLI*WFTLCGRCPPFKILPSLIELHPNQ*SSSF*HSVFLWF*RHRH*GSGASKSRYA*LLSGAS*CCY*NISLFENPQKT**GICRGEIASAYRQAYWKGD*IH*GFCFTCHKLWKKWLSAF  450
                ALCS W L *+V TT V  +    *I G  *  TL       KILP L  LHP++ S    H VF WF* +RH GS  SKS +A L S AS*CC  +I L ++  +   G+C G+ +S Y  A+ + + IH*GF    +KLW++WL A+
Subject    759  ALCSRWQLE*DVLTTFVMQILTEG*ICGTA*RLTLLS*YHSLKILPPLA*LHPHRQSFDLKHEVFFWF*CNRHKGS*TSKSWHAQLFSSAS*CCNQDIPLLKDS*EARQGVC*GKASSTY**AHRERNKIH*GFFLISYKLWEEWLFAY  1205

Range 4: 758 to 1201 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.8 bits(253) 0.0 69/148(47%) 0/148(0%) Plus/Plus
Query        3  CSLLRMVTGVKCIHNHCQVGICLKLDQWSYLMVHAMRSMSSIQNSAITY*ASPQSIIF*FLTFGVSLVLTPSALRIWSL*VAVCIAAFRCIMMLLLKYIFI*EPSKNLIRNLPRRNCVSLSTSLLEGRLNSLRILLHLS*VVEEVALC  446
                CSLL+M TG++C HN C      +LD W  L  HA + +S  QNSA T  ASP   IF*  T GV LVL   A RI +L*V  C   F+CIMML  +Y F *   ++  R+L R++ V+L  S    + NSLRI  H  * V  VALC
Subject    758  CSLLQMATGMRCTHNLCHADTY*RLDLWYCLTAHATQLISFTQNSATTCLASPP*AIF*PQT*GVFLVLMQ*A*RILNL*VVACTVVFQCIMML*PRYTFT*GLLRSQTRSLLRQSFVNLLISPQGEK*NSLRIFPH*L*AVGGVALC  1201

Range 5: 880 to 1203 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
103.7 bits(220) 0.0 52/108(48%) 0/108(0%) Minus/Minus
Query      125  KQRATSSTTYDK*SKILNEFNLPSSRLVDKLTQFRLGRFLIRFFEGSQIKIYFSNNIMMHRKAAMHTAT*RLQILNADGVKTRETPNVRN*KIIDWGEAQ*VMAEF*M  448
                KQRAT  T Y+ * KILNEF      L++KLT+  L R L+   +   +K+Y   NIMMH K  +H  T*R +IL A  +KTR+TP+V   KI   GEA+ V+AEF*+
Subject    880  KQRATPPTAYN**GKILNEFYFSPCGLINKLTKLCLSRLLVWLLKSP*VKVYLGYNIMMHWKTTVHATT*RFKILYAYCIKTRKTPHV*GQKIAYGGEAKQVVAEF*V  1203

Range 6: 758 to 1126 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.3 bits(195) 0.0 54/123(44%) 0/123(0%) Minus/Minus
Query        3  ACR*ADAISPRQIPYQVF*GFSNKDIF**QHHDAPESSYAYRDLEAPDP*CRWRQNQRNTEC*KLEDY*LG*SSISDGRILNGGHRPHSVNHQIRPLI*L*ANTYLTMVVNTFHTSYHPEQRA  371
                A +* D   P+Q P    *   +K I   QHHDA E++ A  DLE  DP C   QNQ+NT C + +D   G*S  S GRIL+  ++  SV+ Q  P I*   +  +T VV+T H+S H EQRA
Subject    758  AYQ*VDEALPQQTPCLAS*ESLSKGISWLQHHDALENNCACHDLEVQDPLCLLHQNQKNTSCLRSKDCLWG*S*ASGGRILSE*YQLSSVSRQAVPQI*PSVSICMTKVVSTSHSSCHLEQRA  1126

Range 7: 1145 to 1201 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
26.7 bits(52) 0.0 11/19(58%) 0/19(0%) Minus/Minus
Query      390  AESHFFHNL*QVKQNPQ*I  446
                A+SH  H+L* +++NPQ*I
Subject   1145  AKSHSSHSL*LMRKNPQ*I  1201

Rupestris stem pitting associated virus strain SG1, complete genome

Sequence ID: AY881626.1 Length: 8742 Number of Matches: 7

Range 1: 757 to 1203 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
338.3 bits(732) 0.0 138/149(93%) 0/149(0%) Plus/Plus
Query        2  MLFAPDGNWCEMYSQPLSSRYLLKARSVVLSDGSRYAVDVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL  448
                +LFAPDGNW EMYSQPLS RYLLKARSVVL DGSRY VD++HSKFCHHLLSFTPI NLL SN+RCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDF+SLVISCGRSGSLL
Subject    757  LLFAPDGNWNEMYSQPLSCRYLLKARSVVLPDGSRYLVDIIHSKFCHHLLSFTPIGNLLTSNLRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFSSLVISCGRSGSLL  1203

Range 2: 759 to 1202 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
269.6 bits(582) 0.0 120/148(81%) 0/148(0%) Minus/Minus
Query        4  SREPLLPQLMTSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCIPRLRGSRSLMPMASKPEKHRMLETRRLLIGVKLNK*WQNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKS  447
                S+EPLLPQL+T+E KSSMN ISLPVGLSIS*R+FASADSLSGFLRVLK*RYILVTTS*CTGKQLC+PRLRGSRS MP+ASKPEKH   E +RL +GVKL+K WQNFE   ST *REPS  TTDLA SKYL D GCEYIS QLPSGAKS
Subject    759  SKEPLLPQLITNEEKSSMNFISLPVGLSIS*RSFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSRSFMPIASKPEKHLKFEVKRLPMGVKLSKWWQNFE*MISTK*REPSGSTTDLAFSKYLHDKGCEYISFQLPSGAKS  1202

Range 3: 760 to 1203 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
117.0 bits(249) 0.0 69/148(47%) 0/148(0%) Minus/Minus
Query        5  KQRATSSTTYDK*SKILNEFNLPSSRLVDKLTQFRLGRFLIRFFEGSQIKIYFSNNIMMHRKAAMHTAT*RLQILNADGVKTRETPNVRN*KIIDWGEAQ*VMAEF*MEXXXXXXXXXXXDH*SSFKQIPT*QWL*IHFTPVTIRSKE  448
                KQRAT  T Y+ * KILNEF      L++KLT+  L R L+   +   +K+Y   +IMMH K  +H   *R +IL A  +KTR+TP V   KI   GEA+ V+AEF*+ DI+++A* +R  H SS + +  *Q L*+H  PV I SKE
Subject    760  KQRATPPTAYN**GKILNEFYFSPCGLINKLTKLCLSRLLVWLLKSP*VKVYLGYDIMMHWKTTVHATA*RFKILYAYCIKTRKTPQV*GQKIAYGGEAKQVVAEF*VNDINQVA*AVRQYHRSSLQ*VSA*QRL*VHLIPVAIWSKE  1203

Range 4: 758 to 1201 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.4 bits(239) 0.0 67/148(45%) 0/148(0%) Plus/Plus
Query        3  CSLLRMVTGVKCIHNHCQVGICLKLDQWSYLMVHAMRSMSSIQNSAITY*ASPQSIIF*FLTFGVSLVLTPSALRIWSL*VAVCIAAFRCIMMLLLKYIFI*EPSKNLIRNLPRRNCVSLSTSLLEGRLNSLRILLHLS*VVEEVALC  446
                CSLL+M TG++C HN C      +LD W  L  HA   +S  QNSA T  ASP   IF*  T GV LVL   A RI +L*   C   F+CIMM   +Y F *   ++  R+L R++ V+L  S    + NSLRI  H  * V  VALC
Subject    758  CSLLQMATGMRCTHNLCHADTY*RLDLWYCLTAHATWLISFTQNSATTCLASPP*AIF*PQT*GVFLVLMQ*A*RILNL*AVACTVVFQCIMMS*PRYTFT*GLLRSQTRSLLRQSFVNLLISPQGEK*NSLRIFPH*L*AVGGVALC  1201

Range 5: 759 to 1205 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
110.1 bits(234) 0.0 64/149(43%) 0/149(0%) Plus/Plus
Query        4  ALCSGW*LV*NVFTTIVK*VFA*S*ISGLI*WFTLCGRCPPFKILPSLIELHPNQ*SSSF*HSVFLWF*RHRH*GSGASKSRYA*LLSGAS*CCY*NISLFENPQKT**GICRGEIASAYRQAYWKGD*IH*GFCFTCHKLWKKWLSAF  450
                ALCS W L *+V TT V  +    *I G  *  TL G     KILP L  LHP++ S      VF WF* +RH GS  SK  +A L S AS*C   +I L ++  +   G+C G+ +S Y  A+ + + IH*GF    +KLW++WL A+
Subject    759  ALCSRWQLE*DVLTTFVMQILTEG*ICGTA*RLTLLG*YHSLKILPPLA*LHPHRQSFDLKLEVFFWF*CNRHKGS*TSKPWHAQLFSSAS*CRNQDIPLLKDS*EARQGVC*GKASSTY**AHRERNKIH*GFFLISYKLWEEWLFAY  1205

Range 6: 758 to 1126 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
87.2 bits(184) 0.0 52/123(42%) 0/123(0%) Minus/Minus
Query        3  ACR*ADAISPRQIPYQVF*GFSNKDIF**QHHDAPESSYAYRDLEAPDP*CRWRQNQRNTEC*KLEDY*LG*SSISDGRILNGGHRPHSVNHQIRPLI*L*ANTYLTMVVNTFHTSYHPEQRA  371
                A +* D   P+Q P    *   +K I   +HHDA E++ A   LE  DP C   QNQ+NT   + +D   G*S  S GRIL+  ++P SV+ Q  P I*   +  +T VV+T H+S H EQRA
Subject    758  AYQ*VDEALPQQTPCLAS*ESLSKGISWLRHHDALENNCACHGLEVQDPLCLLHQNQKNTSSLRSKDCLWG*S*ASGGRILSE*YQPSSVSRQAVPQI*PSVSICMTKVVSTSHSSCHLEQRA  1126

Range 7: 1145 to 1201 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
26.7 bits(52) 0.0 11/19(58%) 0/19(0%) Minus/Minus
Query      390  AESHFFHNL*QVKQNPQ*I  446
                A+SH  H+L* +++NPQ*I
Subject   1145  AKSHSSHSL*LMRKNPQ*I  1201

Grapevine rupestris stem pitting associated virus isolate GRSPaV WA, complete genome

Sequence ID: KC427107.1 Length: 8742 Number of Matches: 7

Range 1: 757 to 1203 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
337.9 bits(731) 0.0 138/149(93%) 0/149(0%) Plus/Plus
Query        2  MLFAPDGNWCEMYSQPLSSRYLLKARSVVLSDGSRYAVDVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL  448
                +LFAPDGNW EMYSQPLS RYLLKARSVVL DGSRY VD++HSKFCHHLLSFTPI NLL SN+RCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDF+SLVISCGRSGSLL
Subject    757  LLFAPDGNWNEMYSQPLSCRYLLKARSVVLPDGSRYLVDIIHSKFCHHLLSFTPIGNLLTSNMRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFSSLVISCGRSGSLL  1203

Range 2: 759 to 1202 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
272.3 bits(588) 0.0 121/148(82%) 0/148(0%) Minus/Minus
Query        4  SREPLLPQLMTSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCIPRLRGSRSLMPMASKPEKHRMLETRRLLIGVKLNK*WQNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKS  447
                S+EPLLPQL+T+E KSSMN ISLPVGLSIS*R+FASADSLSGFLRVLK*RYILVTTS*CTGKQLC+PRLRGSRS MP+ASKPEKH M E +RL +GVKL+K WQNFE   ST *REPS  TTDLA SKYL D GCEYIS QLPSGAKS
Subject    759  SKEPLLPQLITNEEKSSMNFISLPVGLSIS*RSFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSRSFMPIASKPEKHLMFEVKRLPMGVKLSKWWQNFE*MISTK*REPSGSTTDLAFSKYLHDKGCEYISFQLPSGAKS  1202

Range 3: 760 to 1203 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
117.5 bits(250) 0.0 69/148(47%) 0/148(0%) Minus/Minus
Query        5  KQRATSSTTYDK*SKILNEFNLPSSRLVDKLTQFRLGRFLIRFFEGSQIKIYFSNNIMMHRKAAMHTAT*RLQILNADGVKTRETPNVRN*KIIDWGEAQ*VMAEF*MEXXXXXXXXXXXDH*SSFKQIPT*QWL*IHFTPVTIRSKE  448
                KQRAT  T Y+ * KILNEF      L++KLT+  L R L+   +   +K+Y   +IMMH K  +H   *R +IL A  +KTR+TP+V   KI   GEA+ V+AEF*+ DI+++A* +R  H SS + +  *Q L*+H  PV I SKE
Subject    760  KQRATPPTAYN**GKILNEFYFSPCGLINKLTKLCLSRLLVWLLKSP*VKVYLGYDIMMHWKTTVHATA*RFKILYAYCIKTRKTPHV*GQKIAYGGEAKQVVAEF*VNDINQVA*AVRQYHRSSLQ*VSA*QRL*VHLIPVAIWSKE  1203

Range 4: 759 to 1205 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
115.2 bits(245) 0.0 65/149(44%) 0/149(0%) Plus/Plus
Query        4  ALCSGW*LV*NVFTTIVK*VFA*S*ISGLI*WFTLCGRCPPFKILPSLIELHPNQ*SSSF*HSVFLWF*RHRH*GSGASKSRYA*LLSGAS*CCY*NISLFENPQKT**GICRGEIASAYRQAYWKGD*IH*GFCFTCHKLWKKWLSAF  450
                ALCS W L *+V TT V  +    *I G  *  TL G     KILP L  LHP++ S    H VF WF* +RH GS  SK  +A L S AS*C   +I L ++  +   G+C G+ +S Y  A+ + + IH*GF    +KLW++WL A+
Subject    759  ALCSRWQLE*DVLTTFVMQILTEG*ICGTA*RLTLLG*YHSLKILPPLA*LHPHRQSFDLKHEVFFWF*CNRHKGS*TSKPWHAQLFSSAS*CRNQDIPLLKDS*EARQGVC*GKASSTY**AHRERNKIH*GFFLISYKLWEEWLFAY  1205

Range 5: 758 to 1201 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.4 bits(239) 0.0 67/148(45%) 0/148(0%) Plus/Plus
Query        3  CSLLRMVTGVKCIHNHCQVGICLKLDQWSYLMVHAMRSMSSIQNSAITY*ASPQSIIF*FLTFGVSLVLTPSALRIWSL*VAVCIAAFRCIMMLLLKYIFI*EPSKNLIRNLPRRNCVSLSTSLLEGRLNSLRILLHLS*VVEEVALC  446
                CSLL+M TG++C HN C      +LD W  L  HA   +S  QNSA T  ASP   IF*  T GV LVL   A RI +L*   C   F+CIMM   +Y F *   ++  R+L R++ V+L  S    + NSLRI  H  * V  VALC
Subject    758  CSLLQMATGMRCTHNLCHADTY*RLDLWYCLTAHATWLISFTQNSATTCLASPP*AIF*PQT*GVFLVLMQ*A*RILNL*AVACTVVFQCIMMS*PRYTFT*GLLRSQTRSLLRQSFVNLLISPQGEK*NSLRIFPH*L*AVGGVALC  1201

Range 6: 758 to 1126 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.8 bits(194) 0.0 53/123(43%) 0/123(0%) Minus/Minus
Query        3  ACR*ADAISPRQIPYQVF*GFSNKDIF**QHHDAPESSYAYRDLEAPDP*CRWRQNQRNTEC*KLEDY*LG*SSISDGRILNGGHRPHSVNHQIRPLI*L*ANTYLTMVVNTFHTSYHPEQRA  371
                A +* D   P+Q P    *   +K I   +HHDA E++ A   LE  DP C   QNQ+NT C + +D   G*S  S GRIL+  ++P SV+ Q  P I*   +  +T VV+T H+S H EQRA
Subject    758  AYQ*VDEALPQQTPCLAS*ESLSKGISWLRHHDALENNCACHGLEVQDPLCLLHQNQKNTSCLRSKDCLWG*S*ASGGRILSE*YQPSSVSRQAVPQI*PSVSICMTKVVSTSHSSCHLEQRA  1126

Range 7: 1145 to 1201 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
26.7 bits(52) 0.0 11/19(58%) 0/19(0%) Minus/Minus
Query      390  AESHFFHNL*QVKQNPQ*I  446
                A+SH  H+L* +++NPQ*I
Subject   1145  AKSHSSHSL*LMRKNPQ*I  1201

Nucleotide Sequence (396 letters)

Query ID:ds2016-58_48
Query definition:No definition line
Query length:589
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 13 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
40
80
120
160
200
240
280
320
360
396

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus complete genome, genomic RNA, isolate GRSPaV MG

Sequence ID: FR691076.1 Length: 8749 Number of Matches: 8

Range 1: 7503 to 7889 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
288.4 bits(623) 0.0 125/129(97%) 0/129(0%) Minus/Plus
Query        5  *LHSYMYCLFGILVLVGIAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTVREVLGGLKALGISHITEEIDYRC*IG*MASQVGKLPGESNEAFEARLKSLELARAQKQPEGPNTPNT  391
                *LHSYMYCLFGILVLVGIAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTVREVLGGLKALG+SH TEEIDYRC*IG*MASQVGKLPGESNEAFEARLKSLELARAQKQPEG NTP T
Subject   7503  *LHSYMYCLFGILVLVGIAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTVREVLGGLKALGVSHTTEEIDYRC*IG*MASQVGKLPGESNEAFEARLKSLELARAQKQPEGSNTPPT  7889

Range 2: 7505 to 7882 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
281.9 bits(609) 0.0 123/126(98%) 0/126(0%) Plus/Minus
Query       12  GVFGPSGCF*ALANSSDFSRASNASFDSPGSLPT*LAI*PI*QR*SISSVIWLIPKAFKPPNTSLTVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIAIPTKTRIPNRQYMYECN  389
                GVF PSGCF*ALANSSDFSRASNASFDSPGSLPT*LAI*PI*QR*SISSV+WL PKAFKPPNTSLTVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIAIPTKTRIPNRQYMYECN
Subject   7505  GVFEPSGCF*ALANSSDFSRASNASFDSPGSLPT*LAI*PI*QR*SISSVVWLTPKAFKPPNTSLTVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIAIPTKTRIPNRQYMYECN  7882

Range 3: 7502 to 7888 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
273.2 bits(590) 0.0 121/129(94%) 0/129(0%) Minus/Plus
Query        6  VIAFIHVLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLYQGHWRVYFD*KLWPKRGPCINSEGGVGRFEGFRN*PYY*RXXXXXXXXXNGESGW*APRRIK*GI*SPAEITGVG*SSKAARRPKHTQH  392
                +IAFIHVLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLYQG+WRVYFD*KLWPKRGPC+NSEGGVGRFEGFR *PYY*RN*LSLLNWLNGES W*APRRIK*GI*SPAEITGVG*SSKAARR KHT +
Subject   7502  LIAFIHVLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLYQGYWRVYFD*KLWPKRGPCVNSEGGVGRFEGFRG*PYY*RN*LSLLNWLNGESSW*APRRIK*GI*SPAEITGVG*SSKAARRLKHTTY  7888

Range 4: 7504 to 7731 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
182.5 bits(392) 0.0 73/76(96%) 0/76(0%) Plus/Minus
Query      163  YG*FLKPSNLPTPPSLLMQGPRLGHNFQSK*TLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAI  390
                YG* LKPSNLPTPPSLL QGPRLGHNFQSK*TLQ P**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAI
Subject   7504  YG*PLKPSNLPTPPSLLTQGPRLGHNFQSK*TLQ*P**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAI  7731

Range 5: 7771 to 7881 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.2 bits(173) 0.0 35/37(95%) 0/37(0%) Plus/Minus
Query       13  VCLGLLAAFEL*PTPVISAGLQMPHLIRRGAYQPDSP  123
                VCL LLAAFEL*PTPVISAGLQMPHLIRRGAYQ DSP
Subject   7771  VCLSLLAAFEL*PTPVISAGLQMPHLIRRGAYQLDSP  7881

Range 6: 7503 to 7880 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
215.5 bits(464) 0.0 121/126(96%) 0/126(0%) Plus/Minus
Query       14  CVWAFWXXXXXXXXXXXXPGFKCLI*FAGEXXXXXXXXXXXXXIINFFSNMANS*SLQTSQHLPHC*CKGLAWATIFNQNRLSSGPDKATLVTATTVVYMSKDLDGNCNSYQDQNSKQTIHV*MQL  391
                CV AFWLLLSSSQLQ*FQPGFKCLI*FAGELTNLTRHLTNLTTIINFFS+MAN *SLQTSQHLPHC* KGLAWATIFNQNRLSS PDKATLVTATTVVYMSKDLDGNCNSYQDQNSKQTIHV*MQL
Subject   7503  CV*AFWLLLSSSQLQ*FQPGFKCLI*FAGELTNLTRHLTNLTTIINFFSSMANP*SLQTSQHLPHC*RKGLAWATIFNQNRLSSSPDKATLVTATTVVYMSKDLDGNCNSYQDQNSKQTIHV*MQL  7880

Range 7: 7504 to 7710 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
126.6 bits(270) 0.0 67/69(97%) 0/69(0%) Minus/Plus
Query      184  NCIHTCIVCLEFWSW*ELQLPSKSLLMXXXXXXXXXXALSGPLESLF*LKIVAQARPLHQQ*GRCWEV*  390
                NCIHTCIVCLEFWSW*ELQLPSKSLLM*TTVVAVTKVALSG LESLF*LKIVAQARPL QQ*GRCWEV*
Subject   7504  NCIHTCIVCLEFWSW*ELQLPSKSLLM*TTVVAVTKVALSGLLESLF*LKIVAQARPLRQQ*GRCWEV*  7710

Range 8: 7789 to 7881 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.3 bits(169) 0.0 31/31(100%) 0/31(0%) Minus/Plus
Query       13  SSPANQMRHLKPG*NHWSWLELKSSQKAQTH  105
                SSPANQMRHLKPG*NHWSWLELKSSQKAQTH
Subject   7789  SSPANQMRHLKPG*NHWSWLELKSSQKAQTH  7881

Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome

Sequence ID: JX559646.1 Length: 8726 Number of Matches: 8

Range 1: 7503 to 7889 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
285.2 bits(616) 0.0 123/129(95%) 0/129(0%) Minus/Plus
Query        5  *LHSYMYCLFGILVLVGIAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTVREVLGGLKALGISHITEEIDYRC*IG*MASQVGKLPGESNEAFEARLKSLELARAQKQPEGPNTPNT  391
                *LHSYMYCLFGILVLVGIAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTV+EVLGGLKALGISH TEEIDYRC*IG*MASQ+GKLPGESNEAFEARLKSLELAR QKQPEG NTP T
Subject   7503  *LHSYMYCLFGILVLVGIAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGISHTTEEIDYRC*IG*MASQIGKLPGESNEAFEARLKSLELARTQKQPEGSNTPPT  7889

Range 2: 7505 to 7882 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
275.5 bits(595) 0.0 120/126(95%) 0/126(0%) Plus/Minus
Query       12  GVFGPSGCF*ALANSSDFSRASNASFDSPGSLPT*LAI*PI*QR*SISSVIWLIPKAFKPPNTSLTVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIAIPTKTRIPNRQYMYECN  389
                GVF PSGCF* LANSSDFSRASNASFDSPGSLP *LAI*PI QR*SISSV+WLIPKAFKPPNTS TVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIAIPTKTRIPNRQYMYECN
Subject   7505  GVFEPSGCF*VLANSSDFSRASNASFDSPGSLPI*LAI*PIQQR*SISSVVWLIPKAFKPPNTSFTVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIAIPTKTRIPNRQYMYECN  7882

Range 3: 7502 to 7888 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
260.4 bits(562) 0.0 116/129(90%) 0/129(0%) Minus/Plus
Query        6  VIAFIHVLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLYQGHWRVYFD*KLWPKRGPCINSEGGVGRFEGFRN*PYY*RXXXXXXXXXNGESGW*APRRIK*GI*SPAEITGVG*SSKAARRPKHTQH  392
                +IAFIHVLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLYQGHWRV FD*KLWPK GPC+N +GGVGRFEGFR+*PYY*RN*LSLLNWLNG+S W*APRRIK*GI*SPAEITGVG*+SKAARR KHT +
Subject   7502  LIAFIHVLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLYQGHWRVNFD*KLWPK*GPCVNRKGGVGRFEGFRD*PYY*RN*LSLLNWLNGKSDW*APRRIK*GI*SPAEITGVG*NSKAARRLKHTAY  7888

Range 4: 7504 to 7731 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
180.2 bits(387) 0.0 70/76(92%) 0/76(0%) Plus/Minus
Query      163  YG*FLKPSNLPTPPSLLMQGPRLGHNFQSK*TLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAI  390
                YG* LKPSNLPTPP  L QGP LGHNFQSK TLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAI
Subject   7504  YG*SLKPSNLPTPPLRLTQGPHLGHNFQSKLTLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAI  7731

Range 5: 7771 to 7881 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.5 bits(165) 0.0 33/37(89%) 0/37(0%) Plus/Minus
Query       13  VCLGLLAAFEL*PTPVISAGLQMPHLIRRGAYQPDSP  123
                VCL LLAAFE *PTPVISAGLQMPHLIRRGAYQ D P
Subject   7771  VCLSLLAAFEF*PTPVISAGLQMPHLIRRGAYQSDLP  7881

Range 6: 7503 to 7880 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
199.5 bits(429) 0.0 115/126(91%) 0/126(0%) Plus/Minus
Query       14  CVWAFWXXXXXXXXXXXXPGFKCLI*FAGEXXXXXXXXXXXXXIINFFSNMANS*SLQTSQHLPHC*CKGLAWATIFNQNRLSSGPDKATLVTATTVVYMSKDLDGNCNSYQDQNSKQTIHV*MQL  391
                CV AFWLLLSSSQLQ*FQPGFKCLI*FAGELTNLT HLTN TTIINFFS+MAN *SLQTSQHL + * KGL WATIFNQN LSSGPDKATLVTATTVVYMSKDLDGNCNSYQDQNSKQTIHV*MQL
Subject   7503  CV*AFWLLLSSSQLQ*FQPGFKCLI*FAGELTNLTCHLTNSTTIINFFSSMANP*SLQTSQHLLYG*RKGLTWATIFNQN*LSSGPDKATLVTATTVVYMSKDLDGNCNSYQDQNSKQTIHV*MQL  7880

Range 7: 7504 to 7710 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
120.2 bits(256) 0.0 64/69(93%) 0/69(0%) Minus/Plus
Query      184  NCIHTCIVCLEFWSW*ELQLPSKSLLMXXXXXXXXXXALSGPLESLF*LKIVAQARPLHQQ*GRCWEV*  390
                NCIHTCIVCLEFWSW*ELQLPSKSLLM*TTVVAVTKVALSGPLES F*LKIVAQ RPL Q * RCWEV*
Subject   7504  NCIHTCIVCLEFWSW*ELQLPSKSLLM*TTVVAVTKVALSGPLESQF*LKIVAQVRPLRQP*RRCWEV*  7710

Range 8: 7789 to 7881 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.3 bits(169) 0.0 31/31(100%) 0/31(0%) Minus/Plus
Query       13  SSPANQMRHLKPG*NHWSWLELKSSQKAQTH  105
                SSPANQMRHLKPG*NHWSWLELKSSQKAQTH
Subject   7789  SSPANQMRHLKPG*NHWSWLELKSSQKAQTH  7881

Grapevine rupestris stem pitting associated virus isolate GRSPaV WA, complete genome

Sequence ID: KC427107.1 Length: 8742 Number of Matches: 8

Range 1: 7503 to 7889 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
285.2 bits(616) 0.0 123/129(95%) 0/129(0%) Minus/Plus
Query        5  *LHSYMYCLFGILVLVGIAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTVREVLGGLKALGISHITEEIDYRC*IG*MASQVGKLPGESNEAFEARLKSLELARAQKQPEGPNTPNT  391
                *LHSYMYCLFGILVLVGIAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTV+EVLGGLKALGISH TEEIDYRC*IG*MASQ+GKLPGESNEAFEARLKSLELAR QKQPEG NTP T
Subject   7503  *LHSYMYCLFGILVLVGIAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGISHTTEEIDYRC*IG*MASQIGKLPGESNEAFEARLKSLELARTQKQPEGTNTPPT  7889

Range 2: 7505 to 7882 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
272.3 bits(588) 0.0 119/126(94%) 0/126(0%) Plus/Minus
Query       12  GVFGPSGCF*ALANSSDFSRASNASFDSPGSLPT*LAI*PI*QR*SISSVIWLIPKAFKPPNTSLTVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIAIPTKTRIPNRQYMYECN  389
                GVF PSGCF* LANSSDFSRAS ASFDSPGSLP *LAI*PI QR*SISSV+WLIPKAFKPPNTS TVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIAIPTKTRIPNRQYMYECN
Subject   7505  GVFVPSGCF*VLANSSDFSRASKASFDSPGSLPI*LAI*PIQQR*SISSVVWLIPKAFKPPNTSFTVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIAIPTKTRIPNRQYMYECN  7882

Range 3: 7502 to 7888 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
259.0 bits(559) 0.0 115/129(89%) 0/129(0%) Minus/Plus
Query        6  VIAFIHVLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLYQGHWRVYFD*KLWPKRGPCINSEGGVGRFEGFRN*PYY*RXXXXXXXXXNGESGW*APRRIK*GI*SPAEITGVG*SSKAARRPKHTQH  392
                +IAFIHVLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLYQGHWRV FD*KLWPK GPC+N +GGVGRFEGFR+*PYY*RN*LSLLNWLNG+S W*APRRIK*G *SPAEITGVG*+SKAARR KHT +
Subject   7502  LIAFIHVLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLYQGHWRVNFD*KLWPK*GPCVNRKGGVGRFEGFRD*PYY*RN*LSLLNWLNGKSDW*APRRIK*GF*SPAEITGVG*NSKAARRHKHTAY  7888

Range 4: 7504 to 7731 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
180.2 bits(387) 0.0 70/76(92%) 0/76(0%) Plus/Minus
Query      163  YG*FLKPSNLPTPPSLLMQGPRLGHNFQSK*TLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAI  390
                YG* LKPSNLPTPP  L QGP LGHNFQSK TLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAI
Subject   7504  YG*SLKPSNLPTPPLRLTQGPHLGHNFQSKLTLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAI  7731

Range 5: 7771 to 7881 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
74.4 bits(156) 0.0 32/37(86%) 0/37(0%) Plus/Minus
Query       13  VCLGLLAAFEL*PTPVISAGLQMPHLIRRGAYQPDSP  123
                VCL LLAAFE *PTPVISAGLQ PHLIRRGAYQ D P
Subject   7771  VCLCLLAAFEF*PTPVISAGLQKPHLIRRGAYQSDLP  7881

Range 6: 7503 to 7880 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
195.8 bits(421) 0.0 114/126(90%) 0/126(0%) Plus/Minus
Query       14  CVWAFWXXXXXXXXXXXXPGFKCLI*FAGEXXXXXXXXXXXXXIINFFSNMANS*SLQTSQHLPHC*CKGLAWATIFNQNRLSSGPDKATLVTATTVVYMSKDLDGNCNSYQDQNSKQTIHV*MQL  391
                CV AFWLLLSSSQLQ*FQPGFK LI*FAGELTNLT HLTN TTIINFFS+MAN *SLQTSQHL + * KGL WATIFNQN LSSGPDKATLVTATTVVYMSKDLDGNCNSYQDQNSKQTIHV*MQL
Subject   7503  CVCAFWLLLSSSQLQ*FQPGFKSLI*FAGELTNLTCHLTNSTTIINFFSSMANP*SLQTSQHLLYG*RKGLTWATIFNQN*LSSGPDKATLVTATTVVYMSKDLDGNCNSYQDQNSKQTIHV*MQL  7880

Range 7: 7504 to 7710 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
120.2 bits(256) 0.0 64/69(93%) 0/69(0%) Minus/Plus
Query      184  NCIHTCIVCLEFWSW*ELQLPSKSLLMXXXXXXXXXXALSGPLESLF*LKIVAQARPLHQQ*GRCWEV*  390
                NCIHTCIVCLEFWSW*ELQLPSKSLLM*TTVVAVTKVALSGPLES F*LKIVAQ RPL Q * RCWEV*
Subject   7504  NCIHTCIVCLEFWSW*ELQLPSKSLLM*TTVVAVTKVALSGPLESQF*LKIVAQVRPLRQP*RRCWEV*  7710

Range 8: 7789 to 7881 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.3 bits(158) 0.0 30/31(97%) 0/31(0%) Minus/Plus
Query       13  SSPANQMRHLKPG*NHWSWLELKSSQKAQTH  105
                SSPANQMR LKPG*NHWSWLELKSSQKAQTH
Subject   7789  SSPANQMRLLKPG*NHWSWLELKSSQKAQTH  7881

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OE8

Sequence ID: AB277784.1 Length: 2876 Number of Matches: 8

Range 1: 1759 to 2145 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
284.7 bits(615) 0.0 125/129(97%) 0/129(0%) Minus/Plus
Query        5  *LHSYMYCLFGILVLVGIAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTVREVLGGLKALGISHITEEIDYRC*IG*MASQVGKLPGESNEAFEARLKSLELARAQKQPEGPNTPNT  391
                *LHSYMYCLFGILVLVGIAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTVREVLGGLKALGISH TEEI YRC*IG*MASQVGKLPGESNEAFEARLKSLELARAQKQPEG NTP T
Subject   1759  *LHSYMYCLFGILVLVGIAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTVREVLGGLKALGISHTTEEIVYRC*IG*MASQVGKLPGESNEAFEARLKSLELARAQKQPEGSNTPPT  2145

Range 2: 1761 to 2138 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
282.9 bits(611) 0.0 123/126(98%) 0/126(0%) Plus/Minus
Query       12  GVFGPSGCF*ALANSSDFSRASNASFDSPGSLPT*LAI*PI*QR*SISSVIWLIPKAFKPPNTSLTVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIAIPTKTRIPNRQYMYECN  389
                GVF PSGCF*ALANSSDFSRASNASFDSPGSLPT*LAI*PI*QR*+ISSV+WLIPKAFKPPNTSLTVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIAIPTKTRIPNRQYMYECN
Subject   1761  GVFEPSGCF*ALANSSDFSRASNASFDSPGSLPT*LAI*PI*QR*TISSVVWLIPKAFKPPNTSLTVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIAIPTKTRIPNRQYMYECN  2138

Range 3: 1758 to 2144 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
280.6 bits(606) 0.0 123/129(95%) 0/129(0%) Minus/Plus
Query        6  VIAFIHVLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLYQGHWRVYFD*KLWPKRGPCINSEGGVGRFEGFRN*PYY*RXXXXXXXXXNGESGW*APRRIK*GI*SPAEITGVG*SSKAARRPKHTQH  392
                +IAFIHVLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLYQGHWRVYFD*KLWPKRGPCINSEGGVGRFEGFRN*PYY*RN LSLLNWLNGES W*APRRIK*GI*SPAEITGVG*SSKAARR KHT +
Subject   1758  LIAFIHVLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLYQGHWRVYFD*KLWPKRGPCINSEGGVGRFEGFRN*PYY*RNCLSLLNWLNGESSW*APRRIK*GI*SPAEITGVG*SSKAARRLKHTAY  2144

Range 4: 1760 to 1987 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.4 bits(418) 0.0 75/76(99%) 0/76(0%) Plus/Minus
Query      163  YG*FLKPSNLPTPPSLLMQGPRLGHNFQSK*TLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAI  390
                YG*FLKPSNLPTPPSLLMQGPRLGHNFQSK*TLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTD+TCMNAI
Subject   1760  YG*FLKPSNLPTPPSLLMQGPRLGHNFQSK*TLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDSTCMNAI  1987

Range 5: 2027 to 2137 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.2 bits(173) 0.0 35/37(95%) 0/37(0%) Plus/Minus
Query       13  VCLGLLAAFEL*PTPVISAGLQMPHLIRRGAYQPDSP  123
                VCL LLAAFEL*PTPVISAGLQMPHLIRRGAYQ DSP
Subject   2027  VCLSLLAAFEL*PTPVISAGLQMPHLIRRGAYQLDSP  2137

Range 6: 1759 to 2136 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
222.4 bits(479) 0.0 122/126(97%) 0/126(0%) Plus/Minus
Query       14  CVWAFWXXXXXXXXXXXXPGFKCLI*FAGEXXXXXXXXXXXXXIINFFSNMANS*SLQTSQHLPHC*CKGLAWATIFNQNRLSSGPDKATLVTATTVVYMSKDLDGNCNSYQDQNSKQTIHV*MQL  391
                CV AFWLLLSSSQLQ*FQPGFKCLI*FAGELTNLTRHLTNLTTI NFFS+MANS*SLQTSQHLPHC*CKGLAWATIFNQNRLSSGPDKATLVTATTVVYMSKDLDGNCNSYQDQNSKQT+HV*MQL
Subject   1759  CV*AFWLLLSSSQLQ*FQPGFKCLI*FAGELTNLTRHLTNLTTINNFFSSMANS*SLQTSQHLPHC*CKGLAWATIFNQNRLSSGPDKATLVTATTVVYMSKDLDGNCNSYQDQNSKQTVHV*MQL  2136

Range 7: 1760 to 1966 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
132.6 bits(283) 0.0 68/69(99%) 0/69(0%) Minus/Plus
Query      184  NCIHTCIVCLEFWSW*ELQLPSKSLLMXXXXXXXXXXALSGPLESLF*LKIVAQARPLHQQ*GRCWEV*  390
                NCIHTC VCLEFWSW*ELQLPSKSLLM*TTVVAVTKVALSGPLESLF*LKIVAQARPLHQQ*GRCWEV*
Subject   1760  NCIHTCTVCLEFWSW*ELQLPSKSLLM*TTVVAVTKVALSGPLESLF*LKIVAQARPLHQQ*GRCWEV*  1966

Range 8: 2045 to 2137 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.3 bits(169) 0.0 31/31(100%) 0/31(0%) Minus/Plus
Query       13  SSPANQMRHLKPG*NHWSWLELKSSQKAQTH  105
                SSPANQMRHLKPG*NHWSWLELKSSQKAQTH
Subject   2045  SSPANQMRHLKPG*NHWSWLELKSSQKAQTH  2137

Rupestris stem pitting associated virus strain SG1, complete genome

Sequence ID: AY881626.1 Length: 8742 Number of Matches: 8

Range 1: 7503 to 7889 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
284.7 bits(615) 0.0 122/129(95%) 0/129(0%) Minus/Plus
Query        5  *LHSYMYCLFGILVLVGIAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTVREVLGGLKALGISHITEEIDYRC*IG*MASQVGKLPGESNEAFEARLKSLELARAQKQPEGPNTPNT  391
                *LHSYMYCLFGILVLVGIAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALAST++EVLGGLKALGISH TEEIDYRC*IG*MASQ+GKLPGESNEAFEARLKSLELAR QKQPEG NTP T
Subject   7503  *LHSYMYCLFGILVLVGIAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTIKEVLGGLKALGISHTTEEIDYRC*IG*MASQIGKLPGESNEAFEARLKSLELARTQKQPEGTNTPPT  7889

Range 2: 7505 to 7882 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
272.3 bits(588) 0.0 119/126(94%) 0/126(0%) Plus/Minus
Query       12  GVFGPSGCF*ALANSSDFSRASNASFDSPGSLPT*LAI*PI*QR*SISSVIWLIPKAFKPPNTSLTVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIAIPTKTRIPNRQYMYECN  389
                GVF PSGCF* LANSSDFSRASNASFDSPGSLP *LAI*PI QR*SISSV+WLIPKAFKPPNTS  VDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIAIPTKTRIPNRQYMYECN
Subject   7505  GVFVPSGCF*VLANSSDFSRASNASFDSPGSLPI*LAI*PIQQR*SISSVVWLIPKAFKPPNTSFMVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIAIPTKTRIPNRQYMYECN  7882

Range 3: 7502 to 7888 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
260.9 bits(563) 0.0 116/129(90%) 0/129(0%) Minus/Plus
Query        6  VIAFIHVLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLYQGHWRVYFD*KLWPKRGPCINSEGGVGRFEGFRN*PYY*RXXXXXXXXXNGESGW*APRRIK*GI*SPAEITGVG*SSKAARRPKHTQH  392
                +IAFIHVLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLYQGHWRV FD*KLWPK GPC+N +GGVGRFEGFR+*PYY*RN*LSLLNWLNG+S W*APRRIK*GI*SPAEITGVG*+SKAARR KHT +
Subject   7502  LIAFIHVLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLYQGHWRVNFD*KLWPK*GPCVNHKGGVGRFEGFRD*PYY*RN*LSLLNWLNGKSDW*APRRIK*GI*SPAEITGVG*NSKAARRHKHTAY  7888

Range 4: 7504 to 7731 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
180.2 bits(387) 0.0 70/76(92%) 0/76(0%) Plus/Minus
Query      163  YG*FLKPSNLPTPPSLLMQGPRLGHNFQSK*TLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAI  390
                YG* LKPSNLPTPP  L QGP LGHNFQSK TLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAI
Subject   7504  YG*SLKPSNLPTPPLWLTQGPHLGHNFQSKLTLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAI  7731

Range 5: 7771 to 7881 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
77.1 bits(162) 0.0 33/37(89%) 0/37(0%) Plus/Minus
Query       13  VCLGLLAAFEL*PTPVISAGLQMPHLIRRGAYQPDSP  123
                VCL LLAAFE *PTPVISAGLQMPHLIRRGAYQ D P
Subject   7771  VCLCLLAAFEF*PTPVISAGLQMPHLIRRGAYQSDLP  7881

Range 6: 7503 to 7880 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
200.4 bits(431) 0.0 115/126(91%) 0/126(0%) Plus/Minus
Query       14  CVWAFWXXXXXXXXXXXXPGFKCLI*FAGEXXXXXXXXXXXXXIINFFSNMANS*SLQTSQHLPHC*CKGLAWATIFNQNRLSSGPDKATLVTATTVVYMSKDLDGNCNSYQDQNSKQTIHV*MQL  391
                CV AFWLLLSSSQLQ*FQPGFKCLI*FAGELTNLT HLTN TTIINFFS+MAN *SLQTSQHL + * KGL WATIFNQN LSSGPDKATLVTATTVVYMSKDLDGNCNSYQDQNSKQTIHV*MQL
Subject   7503  CVCAFWLLLSSSQLQ*FQPGFKCLI*FAGELTNLTCHLTNSTTIINFFSSMANP*SLQTSQHLLYG*RKGLTWATIFNQN*LSSGPDKATLVTATTVVYMSKDLDGNCNSYQDQNSKQTIHV*MQL  7880

Range 7: 7504 to 7710 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
120.2 bits(256) 0.0 64/69(93%) 0/69(0%) Minus/Plus
Query      184  NCIHTCIVCLEFWSW*ELQLPSKSLLMXXXXXXXXXXALSGPLESLF*LKIVAQARPLHQQ*GRCWEV*  390
                NCIHTCIVCLEFWSW*ELQLPSKSLLM*TTVVAVTKVALSGPLES F*LKIVAQ RPL Q * RCWEV*
Subject   7504  NCIHTCIVCLEFWSW*ELQLPSKSLLM*TTVVAVTKVALSGPLESQF*LKIVAQVRPLRQP*RRCWEV*  7710

Range 8: 7789 to 7881 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.3 bits(169) 0.0 31/31(100%) 0/31(0%) Minus/Plus
Query       13  SSPANQMRHLKPG*NHWSWLELKSSQKAQTH  105
                SSPANQMRHLKPG*NHWSWLELKSSQKAQTH
Subject   7789  SSPANQMRHLKPG*NHWSWLELKSSQKAQTH  7881