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Queries

Nucleotide Sequence (518 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 2 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
52
104
156
208
260
312
364
416
468
518

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
104.4 104.4 29% 3.034e-22 32% BAT62483

Alignments

capsid protein [Red clover powdery mildew-associated totivirus 4]

Sequence ID: dbj|BAT62483.1| Length: 683 Number of Matches: 1

Range 1: 373 to 520 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
104.4 bits(259) 0.0 47/148(32%) 0/148(0%) Plus/Plus
Query        5  WMGIYVAIENYASGLHEWRNAFVSLNEATRVLMSPIGRAAMCSVPFGKEVPTVANDSCWLAFEFGHLAEVQEVKATRLIEEGYPVSKRLTCVPAYVSGALLAGCVVDEYDGISHLSGMQSIPIGEDFVMEPKDALRLANAYRVFGHEV  448
                W+G++  + NY+  + +WR A  S +    +L +P  RAA+ S+  GKE+ T  N++C + ++  +++ V+ +    ++E+GYP   +L  +P YVSG+L+ G V  E   ++HL    S  +     ++P DA + A+ YR+FGH+ 
Subject    373  WVGLHTLVSNYSRDMRDWRPAVESYDAELAILATPESRAALVSLVTGKEIFTCMNNNCHITYDLSNMSNVKHLDEYVVLEQGYPSKLKLDGLPPYVSGSLILGSVACELQEVAHLHSSYSFQVSSYNDLDPVDAGKAASTYRLFGHDT  520

Nucleotide Sequence (661 letters)

Query ID:ds2016-56_75
Query definition:No definition line
Query length:366
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 2 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
67
134
201
268
335
402
469
536
603
661

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
246.5 246.5 31% 2.104e-72 57% BAT62484

Alignments

RNA dependent RNA polymerase, partial [Red clover powdery mildew-associated totivirus 4]

Sequence ID: dbj|BAT62484.1| Length: 775 Number of Matches: 1

Range 1: 437 to 641 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
246.5 bits(628) 0.0 117/205(57%) 0/205(0%) Minus/Plus
Query       45  CVDFEDFNSQHSVKSMKAVIDAYRDTFGHFLTQEQLVAVEWTRLSLDRVIVHDNQGLKMEYSAKGTLLSGWRLTTFMNSVLNYIYTQLIVPDVVQSQNSLHNGDDVLLGSNSLEDVLLAGRNAKKHNIRLQMSKCAYGAIAEFLRVDHKRGSKG*YLSRAMATLVHSRIESKPSSDMRDLLEALESRLDDSVSRGMPMWLAAALR  659
                C+DFEDFNSQHS ++M+AV+ AY D F   LT++Q+ A++WT  S+   I+HDN G K  Y A GTLLSGWRLTTF+NSVLN IY+  ++  + +  +SLHNGDDV++G+ S+E    + +  +K  IR+Q SKCA+ AIAEFLRVDH RGSKG YLSRA ATLVHSRIESKPS+D RDL+E++E+R  D ++RGM + +   LR
Subject    437  CLDFEDFNSQHSPEAMRAVVLAYGDVFNKTLTEDQMRALQWTADSISNQIIHDNTGTKTVYKANGTLLSGWRLTTFVNSVLNAIYSDAVLKGIKRQGSSLHNGDDVIIGATSMEVARRSVQVGRKMGIRIQPSKCAFAAIAEFLRVDHARGSKGQYLSRACATLVHSRIESKPSTDARDLVESMENRFADCLARGMSLQIITNLR  641