Nucleotide Sequence (1020 letters)
Query ID: | ds2016-55_46 |
Query definition: | No definition line |
Query length: | 439 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
62.9 | 62.9 | 8% | 8.442e-08 | 33% | GU108589.1 | |
49.4 | 49.4 | 7% | 0.0009901 | 28% | HM004068.2 |
Alignments
Grapevine associated chrysovirus 2 isolate Ctg208 putative capsid protein gene, partial cds
Sequence ID: GU108589.1 Length: 945 Number of Matches: 1
Range 1: 112 to 360 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
62.9 bits(133) | 0.0 | 27/83(33%) | 0/83(0%) | Plus/Plus |
Query 81 DGDVAYLHDEVSFFEAYWMSNKITHTVKNGLTHSFKAGNGDEESISSSLAALKDELMKAGIRRDQYEEPRGEFVLDGANMHMS 329 +GDV Y+ +EV FEA WM V+ GL + G GD S + EL +G++ +E P+ FV++G +H++ Subject 112 EGDVEYIQNEVGAFEALWMCRTAGFGVERGLLQTMLQGKGDLTSDNEHAQTFIQELSLSGVQVQAFEVPKSSFVVEGTCIHIN 360
Verticillium dahliae chrysovirus 1 segment 2, complete sequence
Sequence ID: HM004068.2 Length: 3313 Number of Matches: 1
Range 1: 1552 to 1758 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
49.4 bits(103) | 0.0 | 19/69(28%) | 0/69(0%) | Plus/Plus |
Query 114 SFFEAYWMSNKITHTVKNGLTHSFKAGNGDEESISSSLAALKDELMKAGIRRDQYEEPRGEFVLDGANM 320 S E W++++ T +NG+ + K G D S+ L++E+ +AG + P+G F ++G N+ Subject 1552 SILEVLWLASRETRVCENGVFYELKKGCHDLTRSGGSMEVLREEMREAGTTATGFTLPQGRFFVEGVNL 1758