Queries
Nucleotide Sequence (518 letters)
Query ID: | ds2016-56_75 |
Query definition: | No definition line |
Query length: | 366 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
104.4 | 104.4 | 29% | 3.034e-22 | 32% | BAT62483 |
Alignments
capsid protein [Red clover powdery mildew-associated totivirus 4]
Sequence ID: dbj|BAT62483.1| Length: 683 Number of Matches: 1
Range 1: 373 to 520 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
104.4 bits(259) | 0.0 | 47/148(32%) | 0/148(0%) | Plus/Plus |
Query 5 WMGIYVAIENYASGLHEWRNAFVSLNEATRVLMSPIGRAAMCSVPFGKEVPTVANDSCWLAFEFGHLAEVQEVKATRLIEEGYPVSKRLTCVPAYVSGALLAGCVVDEYDGISHLSGMQSIPIGEDFVMEPKDALRLANAYRVFGHEV 448 W+G++ + NY+ + +WR A S + +L +P RAA+ S+ GKE+ T N++C + ++ +++ V+ + ++E+GYP +L +P YVSG+L+ G V E ++HL S + ++P DA + A+ YR+FGH+ Subject 373 WVGLHTLVSNYSRDMRDWRPAVESYDAELAILATPESRAALVSLVTGKEIFTCMNNNCHITYDLSNMSNVKHLDEYVVLEQGYPSKLKLDGLPPYVSGSLILGSVACELQEVAHLHSSYSFQVSSYNDLDPVDAGKAASTYRLFGHDT 520
Nucleotide Sequence (661 letters)
Query ID: | ds2016-56_75 |
Query definition: | No definition line |
Query length: | 366 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
246.5 | 246.5 | 31% | 2.104e-72 | 57% | BAT62484 |
Alignments
RNA dependent RNA polymerase, partial [Red clover powdery mildew-associated totivirus 4]
Sequence ID: dbj|BAT62484.1| Length: 775 Number of Matches: 1
Range 1: 437 to 641 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
246.5 bits(628) | 0.0 | 117/205(57%) | 0/205(0%) | Minus/Plus |
Query 45 CVDFEDFNSQHSVKSMKAVIDAYRDTFGHFLTQEQLVAVEWTRLSLDRVIVHDNQGLKMEYSAKGTLLSGWRLTTFMNSVLNYIYTQLIVPDVVQSQNSLHNGDDVLLGSNSLEDVLLAGRNAKKHNIRLQMSKCAYGAIAEFLRVDHKRGSKG*YLSRAMATLVHSRIESKPSSDMRDLLEALESRLDDSVSRGMPMWLAAALR 659 C+DFEDFNSQHS ++M+AV+ AY D F LT++Q+ A++WT S+ I+HDN G K Y A GTLLSGWRLTTF+NSVLN IY+ ++ + + +SLHNGDDV++G+ S+E + + +K IR+Q SKCA+ AIAEFLRVDH RGSKG YLSRA ATLVHSRIESKPS+D RDL+E++E+R D ++RGM + + LR Subject 437 CLDFEDFNSQHSPEAMRAVVLAYGDVFNKTLTEDQMRALQWTADSISNQIIHDNTGTKTVYKANGTLLSGWRLTTFVNSVLNAIYSDAVLKGIKRQGSSLHNGDDVIIGATSMEVARRSVQVGRKMGIRIQPSKCAFAAIAEFLRVDHARGSKGQYLSRACATLVHSRIESKPSTDARDLVESMENRFADCLARGMSLQIITNLR 641