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Nucleotide Sequence (345 letters)

Query ID:ds2016-58_48
Query definition:No definition line
Query length:589
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 1 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
35
70
105
140
175
210
245
280
315
345

Descriptions

Alignments

Cytospora ribis mitovirus 1 RNA dependent RNA polymerase (RdRp) gene, partial cds

Sequence ID: KJ819546.1 Length: 1629 Number of Matches: 4

Range 1: 874 to 1128 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
126.2 bits(269) 0.0 52/85(61%) 0/85(0%) Minus/Minus
Query        3  GVECGLHKSILSHGGIGIELAKNTFVDGINVSPISFKEIQVSHQDLSAWAAFAKKFDLS*DRQARVLGFGYLARRKSFKKMNHAL  257
                GV C L KS+LS  GIG+E AK TF+ G++VSP+S KE+ V+  DLSA++AF++K +L+*+R +R+LGFGYLARRKSF+K+NHAL
Subject    874  GVSCSLAKSVLSPKGIGLEFAKKTFIRGVDVSPLSLKELSVALGDLSAFSAFSQK*NLN*ERVSRLLGFGYLARRKSFRKLNHAL  1128

Range 2: 1138 to 1206 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.1 bits(68) 0.0 13/23(57%) 0/23(0%) Minus/Minus
Query      266  YAVLGDDLVISH*KIARRYLKIL  334
                YAVLGDDLV+    +A +YLK++
Subject   1138  YAVLGDDLVLGSKAVADKYLKLM  1206

Range 3: 872 to 1129 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
65.2 bits(136) 0.0 42/86(49%) 0/86(0%) Plus/Plus
Query        1  CKA*FIFLKDLRLAR*PKPSTLACLSQLRSNFLANAAHAERS*WDTCISLNEIGDTLIPSTNVFFANSXXXXXXXXXXXXXXHSTP  258
                C+A   F KDLRLAR*PKP+    LSQLR +F   A  A +S   T  S  E G+T  P   VF ANS PIP   R D    H TP
Subject    872  CRAWLSFRKDLRLAR*PKPNKRETLSQLRFHF*EKAEKALKSPRATLNSFKERGETSTPRMKVFLANSSPIPFGDRTDFANEHDTP  1129

Range 4: 1145 to 1207 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
22.6 bits(43) 0.0 12/21(57%) 0/21(0%) Plus/Plus
Query      273  FRYLRAIFQ*EITKSSPKTA*  335
                F+YL A      TKSSP TA*
Subject   1145  FKYLSATAFEPRTKSSPSTA*  1207

Clitocybe odora virus complete genome, isolate C Holm

Sequence ID: HE717021.1 Length: 3765 Number of Matches: 2

Range 1: 1826 to 2056 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
69.8 bits(146) 0.0 32/77(42%) 0/77(0%) Minus/Plus
Query       27  GVECGLHKSILSHGGIGIELAKNTFVDGINVSPISFKEIQVSHQDLSAWAAFAKKFDLS*DRQARVLGFGYLARRKS  257
                GVEC L KSI+SH GIG+E AK TF  G NVSP    E+  + +D  A   + K + L       V GFG+  + ++
Subject   1826  GVECNLAKSIMSHRGIGLEFAKKTFFQGFNVSPSPLTEVLAALKDPIALLQYGKIYGLKFVDLLTVAGFGFRVKSRA  2056

Range 2: 1739 to 1816 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.1 bits(68) 0.0 14/26(54%) 0/26(0%) Minus/Plus
Query      266  FSDYAVLGDDLVISH*KIARRYLKIL  343
                F  YAVLGDD+VI   K+A+ Y ++L
Subject   1739  FRAYAVLGDDIVIFDKKVAKYYHRVL  1816

Clitocybe odora virus, complete genome

Sequence ID: NC_017003.1 Length: 3765 Number of Matches: 2

Range 1: 1826 to 2056 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
69.8 bits(146) 0.0 32/77(42%) 0/77(0%) Minus/Plus
Query       27  GVECGLHKSILSHGGIGIELAKNTFVDGINVSPISFKEIQVSHQDLSAWAAFAKKFDLS*DRQARVLGFGYLARRKS  257
                GVEC L KSI+SH GIG+E AK TF  G NVSP    E+  + +D  A   + K + L       V GFG+  + ++
Subject   1826  GVECNLAKSIMSHRGIGLEFAKKTFFQGFNVSPSPLTEVLAALKDPIALLQYGKIYGLKFVDLLTVAGFGFRVKSRA  2056

Range 2: 1739 to 1816 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.1 bits(68) 0.0 14/26(54%) 0/26(0%) Minus/Plus
Query      266  FSDYAVLGDDLVISH*KIARRYLKIL  343
                F  YAVLGDD+VI   K+A+ Y ++L
Subject   1739  FRAYAVLGDDIVIFDKKVAKYYHRVL  1816

Rhizoctonia solani mitovirus 15 isolate K IL s02 3 25b RNA dependent RNA polymerase gene, complete cds

Sequence ID: KP900910.1 Length: 3901 Number of Matches: 2

Range 1: 2527 to 2739 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
69.8 bits(146) 0.0 32/71(45%) 0/71(0%) Minus/Plus
Query       45  GVECGLHKSILSHGGIGIELAKNTFVDGINVSPISFKEIQVSHQDLSAWAAFAKKFDLS*DRQARVLGFGY  257
                GV+CG+ KS+LS  G  IE AK TF  G ++SPI   E   ++  L+   +FA+K+ LS  +  RVLG+GY
Subject   2527  GVQCGIAKSLLSPTGTAIEFAKRTFWMGKDISPIPLLEFIAANLTLADAISFARKYSLSFPQLLRVLGYGY  2739

Range 2: 2440 to 2526 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.8 bits(74) 0.0 15/29(52%) 0/29(0%) Minus/Plus
Query      257  FSDYAVLGDDLVISH*KIARRYLKILDIM  343
                F+ YAVLGDDLVI   ++  +YL I+D +
Subject   2440  FTSYAVLGDDLVIFDQRVKVKYLAIVDAL  2526

Rhizoctonia solani mitovirus 7 isolate k 4 186b RNA dependent RNA polymerase gene, partial cds

Sequence ID: KP900916.1 Length: 3085 Number of Matches: 2

Range 1: 1441 to 1653 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.0 bits(129) 0.0 29/71(41%) 0/71(0%) Minus/Plus
Query       45  GVECGLHKSILSHGGIGIELAKNTFVDGINVSPISFKEIQVSHQDLSAWAAFAKKFDLS*DRQARVLGFGY  257
                GV  GLHKS++S GG  +E AK TFV G +VSP+   E   S    S    F +K++L+     +  G+GY
Subject   1441  GVGIGLHKSLISAGGTALEFAKRTFVHGKDVSPVPITEWIASLNGPSCAVEFIRKYNLTLALFLKAAGYGY  1653

Range 2: 1354 to 1431 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.0 bits(81) 0.0 12/26(46%) 0/26(0%) Minus/Plus
Query      266  FSDYAVLGDDLVISH*KIARRYLKIL  343
                F DYA+LGDD+VI + ++A+ Y++++
Subject   1354  FEDYAILGDDIVIGNSRVAKAYIRVM  1431