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Queries

Nucleotide Sequence (512 letters)

Query ID:ds2016-57_54
Query definition:No definition line
Query length:328
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 5 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
52
104
156
208
260
312
364
416
468
512

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
290.4 290.4 30% 1.629e-88 85% ADO60926

Alignments

putative RNA-dependent RNA polymerase, partial [Grapevine associated chrysovirus-1]

Sequence ID: gb|ADO60926.1| Length: 957 Number of Matches: 1

Range 1: 578 to 732 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
290.4 bits(742) 0.0 131/155(85%) 0/155(0%) Plus/Plus
Query        1  VLYDWADFNEQHSAWEMAQVIKELENVMPDTPDYSMFCSAIIEGMFRMGLEDREGMVHKLWRGLYSGWRGTTWINTVLNFVYVAIALMNLERITGKSVVLMVDHGGDDLDLCLSQPEMMPQFMEIMDNMLFKANKWKQMFGIRSKFFRNTISGAR  465
                VLYDWADFNEQHSAWEMAQVIKELE VMPDTPDY +FCSAI+EGM+ MGL+D+EG +HKLWRGLYSGWRGTTWINTVLNF YV+IAL+N+ER+TG SVVLMVDHGGDDLDL LS+P +MP F+EIMDNMLFKANKWKQMFG RS+FFRNTISGAR
Subject    578  VLYDWADFNEQHSAWEMAQVIKELETVMPDTPDYHLFCSAIVEGMYEMGLQDKEGHLHKLWRGLYSGWRGTTWINTVLNFCYVSIALLNMERLTGVSVVLMVDHGGDDLDLVLSEPSVMPTFLEIMDNMLFKANKWKQMFGKRSEFFRNTISGAR  732

Nucleotide Sequence (311 letters)

Query ID:ds2016-57_54
Query definition:No definition line
Query length:328
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 5 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
32
64
96
128
160
192
224
256
288
311

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
176.0 176.0 32% 2.809e-48 78% ADO60926

Alignments

putative RNA-dependent RNA polymerase, partial [Grapevine associated chrysovirus-1]

Sequence ID: gb|ADO60926.1| Length: 957 Number of Matches: 1

Range 1: 323 to 423 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
176.0 bits(445) 0.0 79/101(78%) 0/101(0%) Plus/Plus
Query        8  MVKPWMGVNFNAWSDLMKSLHSYVRCSRFLMNTEISEQDRQALMYLDLNVGRGEYQIDEMAEVTVRSAETYSSKHLSYDSDLKLFTNEQYITDFSRGIQLA  310
                +VK WMGVNF+ WSD+MKSLHSY+RCSRFLMNTEI+EQDRQ+LMY+DL VGRGEYQIDEMAEV++R ++TYSSKHLSY+ DLK FTNEQYI DFSR +Q+A
Subject    323  IVKKWMGVNFHHWSDVMKSLHSYIRCSRFLMNTEITEQDRQSLMYMDLLVGRGEYQIDEMAEVSLRQSDTYSSKHLSYNPDLKAFTNEQYIKDFSRSVQIA  423

Nucleotide Sequence (551 letters)

Query ID:ds2016-57_54
Query definition:No definition line
Query length:328
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 5 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
56
112
168
224
280
336
392
448
504
551

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
341.7 341.7 33% 2.136e-107 86% ADO60926

Alignments

putative RNA-dependent RNA polymerase, partial [Grapevine associated chrysovirus-1]

Sequence ID: gb|ADO60926.1| Length: 957 Number of Matches: 1

Range 1: 762 to 944 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
341.7 bits(875) 0.0 158/183(86%) 0/183(0%) Minus/Plus
Query        3  VSLLDQIGELRRRGVSNEMCQGVTMSCMSEWCKVKDGEEWMKLREAVLHGVEEQGGLGVPDSANQVWILDKAVPEVNEEWYKIVVPDYKASKDYVKVLSDEMARFSIVIERQEDLAKKLAIDSYDLEKSVDRMAWKKLLNFDGKPIAFRNVIEPMVNDDLMSSFIDFQIDEQMTRKFDKASLY  551
                VSLLDQIG+LRRRGVSNEMCQG TMSC+S WCK+KDGEEWM L EAVLHGVEEQGGLGVPD+ANQVWILDK VPEVNEEWYK+VVPDYKASKDYVKVLSDEMARFSIVI+RQE+LA+KLA+DSYDL+KSVDR+AW+KLL FDGK IA+RN+IEPMVNDD+MSSF+DFQIDE+MTRKFDKAS Y
Subject    762  VSLLDQIGKLRRRGVSNEMCQGFTMSCISHWCKIKDGEEWMNLPEAVLHGVEEQGGLGVPDAANQVWILDKNVPEVNEEWYKVVVPDYKASKDYVKVLSDEMARFSIVIQRQEELAQKLAVDSYDLDKSVDRIAWRKLLQFDGKAIAYRNIIEPMVNDDIMSSFVDFQIDEEMTRKFDKASRY  944

Nucleotide Sequence (299 letters)

Query ID:ds2016-57_54
Query definition:No definition line
Query length:328
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 5 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
30
60
90
120
150
180
210
240
270
299

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
135.2 135.2 33% 7.372e-34 64% ADO60926

Alignments

putative RNA-dependent RNA polymerase, partial [Grapevine associated chrysovirus-1]

Sequence ID: gb|ADO60926.1| Length: 957 Number of Matches: 1

Range 1: 827 to 925 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
135.2 bits(339) 0.0 63/99(64%) 0/99(0%) Plus/Plus
Query        1  VWVLDKPVPEGNDEWYKVVDPGYKTSKDYVKVLSEEIDKFSLAIERQDELAKKLAEDSYDIDKAIDRMEWRKLLKFDGRPMRYLDVIEPKENDAIFELF  297
                VW+LDK VPE N+EWYKVV P YK SKDYVKVLS+E+ +FS+ I+RQ+ELA+KLA DSYD+DK++DR+ WRKLL+FDG+ + Y ++IEP  ND I   F
Subject    827  VWILDKNVPEVNEEWYKVVVPDYKASKDYVKVLSDEMARFSIVIQRQEELAQKLAVDSYDLDKSVDRIAWRKLLQFDGKAIAYRNIIEPMVNDDIMSSF  925

Nucleotide Sequence (424 letters)

Query ID:ds2016-57_54
Query definition:No definition line
Query length:328
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 5 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
43
86
129
172
215
258
301
344
387
424

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
100.5 100.5 27% 4.772e-21 41% ADO60926

Alignments

putative RNA-dependent RNA polymerase, partial [Grapevine associated chrysovirus-1]

Sequence ID: gb|ADO60926.1| Length: 957 Number of Matches: 1

Range 1: 16 to 128 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
100.5 bits(249) 0.0 46/113(41%) 0/113(0%) Minus/Plus
Query       63  AGRYGVIDVDNLVSKELHNKLVEWRVEILTNGETWKDHNKEWFNEVISTLNVMVINKPTVVLVHTEETALEIGAKILGGVQYTRGGLENSIARRSHIGKHFARLNLNTVNESR  401
                A +YG +DVD LV+++ H+ L E R  IL   +TW +HN +W+  +  TL+++  + P ++LVHTEE ALE+GA+ +G ++  R   E +I  R  +GK F+RLN  T++ S+
Subject     16  AHKYGFVDVDMLVTRKEHDDLAEDRASILAGQQTWMEHNTKWYARLNQTLDLLDYSMPVIILVHTEEIALELGARPIGCLKLRRDIFETNIRDRDDLGKTFSRLNYTTLHTSK  128