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Queries

Nucleotide Sequence (593 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 2 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
60
120
180
240
300
360
420
480
540
593

Descriptions

Alignments

Rupestris stem pitting associated virus 1, complete genome

Sequence ID: AF057136.1 Length: 8744 Number of Matches: 9

Range 1: 5165 to 5749 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
445.1 bits(965) 0.0 188/195(96%) 0/195(0%) Plus/Minus
Query        2  LEASKGLPSFSYSKPVVKFSTVL*LHKNQSNI**PIPA*PTCMILYSCCTLTSLLRFKLPHRFIKHDGIMTGFQWDFG*ERI**EFPIWFGPPQFGSLNLGLRKFETLSDSHKEGY*IISFMPWVNAFKPLTCIAQLLTSSTSMLIKELLSHFITTTHLPILFQGHFTHPPGPG*LQITQGDVGFKPFFI*AF*L  586
                LEASKGLPSFSYSKPVVKFSTVL*LHKNQSNI**PIPA*PTCMILYSCCTLTSLLR KL +RF+KHDGIMTGFQWDFG*ERI**EFPIWFGPPQFGS NLGLRKFETLSDSH+EGY*IISFMPWVNAFKPLTCIAQLLTSST MLIKELLSHFITTTHLPILFQGHFTHPPGPG*LQITQGDVGFKPFFI*AF*L
Subject   5165  LEASKGLPSFSYSKPVVKFSTVL*LHKNQSNI**PIPA*PTCMILYSCCTLTSLLRLKLLYRFMKHDGIMTGFQWDFG*ERI**EFPIWFGPPQFGSFNLGLRKFETLSDSHEEGY*IISFMPWVNAFKPLTCIAQLLTSSTPMLIKELLSHFITTTHLPILFQGHFTHPPGPG*LQITQGDVGFKPFFI*AF*L  5749

Range 2: 5165 to 5749 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
432.2 bits(937) 0.0 189/195(97%) 0/195(0%) Minus/Plus
Query        2  ESECSNEEWFKTHIPLSNLESTRARRVGKMALKEYREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKIPLKASHNPIMFDEAVREFXXXXXXXXXATIENHAGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQ  586
                ESECSNEEWFKTHIPLSNLESTRAR VGKMALKEYREVRCGYE+TQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKIPLKASHN IMF EAV+EFEAK+ASKSAATIENHAGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQ
Subject   5165  ESECSNEEWFKTHIPLSNLESTRARWVGKMALKEYREVRCGYEMTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKIPLKASHNSIMFHEAVQEFEAKKASKSAATIENHAGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQ  5749

Range 3: 5163 to 5579 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
337.9 bits(731) 0.0 129/139(93%) 0/139(0%) Plus/Minus
Query      172  QTPAPLHQT*WDYDWLSMGFWIGKNLIRISHMVWPASVWQPQPGASKI*DAFGQP*GRLLNHFLYALGKCFQTSHMHCSVAHQFHLYAHQRTVESLHNHNAPPDTLSRPFYPPSWPWLTPNYSGGCGF*TILHLSILTP  588
                QTP PLH+T*W+YDWLSMGFWIGKNLIRISHMVWPASVWQ QPGASKI*DAFGQP*GRLLNHFLYALGKCFQTSHMHCSVAHQFH YAHQR VES HNHNAPPDTLSRPFYPP+WPWLTP+YS GCGF*TILHLSILTP
Subject   5163  QTPVPLHET*WNYDWLSMGFWIGKNLIRISHMVWPASVWQLQPGASKI*DAFGQP*GRLLNHFLYALGKCFQTSHMHCSVAHQFHPYAHQRIVESFHNHNAPPDTLSRPFYPPTWPWLTPDYSRGCGF*TILHLSILTP  5579

Range 4: 5626 to 5748 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
100.0 bits(212) 0.0 40/41(98%) 0/41(0%) Plus/Minus
Query        3  WKQARVCPALATLSLLSNLVQCCDFIKIRATSNSQSLHDLP  125
                WKQARVCPALATLSLLSNLVQCCDFIKIRATSN+QSLHDLP
Subject   5626  WKQARVCPALATLSLLSNLVQCCDFIKIRATSNNQSLHDLP  5748

Range 5: 5257 to 5748 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
346.6 bits(750) 0.0 153/164(93%) 0/164(0%) Minus/Plus
Query        3  LERVSGGALWL*SDSTVL**A*RWNW*ATEQCM*EV*KHLPKA*RK*FNNLPYGCPKASQIFEAPG*GCQTEAGQTIWEILIRFFPIQNPIESQS*SHHV**SGAGV*SEGG**ECSNYRESCR*VMQGLAIRCCSDFYEVTTLY*I*QQA*SS*SWANPCLLP  494
                LERVSGGALWL*+DST+L**A* WNW*ATEQCM*EV*KHLPKA*RK*FNNLP+GCPKASQIFEAPG* CQTEAGQTIWEILIRFFPIQNPIESQS* HHV *SG GV* E G**ECSNYRESCR*VMQGL IRCCSDFYEVTTLY*I*QQA*SS*SWANPCLLP
Subject   5257  LERVSGGALWL*NDSTIL**A*GWNW*ATEQCM*EV*KHLPKA*RK*FNNLPHGCPKASQIFEAPG*SCQTEAGQTIWEILIRFFPIQNPIESQS*FHHVS*SGTGV*GEEG**ECSNYRESCR*VMQGLVIRCCSDFYEVTTLY*I*QQA*SS*SWANPCLLP  5748

Range 6: 5164 to 5208 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.3 bits(73) 0.0 15/15(100%) 0/15(0%) Minus/Plus
Query      543  GVRMLK*RMV*NPHP  587
                GVRMLK*RMV*NPHP
Subject   5164  GVRMLK*RMV*NPHP  5208

Range 7: 5166 to 5690 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
350.2 bits(758) 0.0 167/175(95%) 0/175(0%) Minus/Plus
Query       61  SQNAQMKNGLKPTSP*VIWSQPGPGGWVKWP*KSIGRCVVVMK*LNSSLMSIEVELVSN*AMHVRGLKAFTQGIKEMIQ*PSLWLSESVSNFRSPRLRLPN*GGPNHMGNSY*ILSYPKSH*KPVIIPSCLMKRCGSLKXXXXXXXXXXXRIMQVGHAGIGY*MLL*FL*SHNTV  585
                SQNAQMKNGLKPTSP*VIWSQPGPGGWVKWP*KSIGRCVVVMK*LN+SLMSI VELVSN*AMHVRGLKAFTQGIKEMIQ*PS WLSESVSNFRSPRL+LPN*GGPNHMGNSY*ILSYPKSH*KPVIIPSC MKR  SL+RRRLVRVQQL*RIMQVGHAGIGY*MLL*FL*SHNTV
Subject   5166  SQNAQMKNGLKPTSP*VIWSQPGPGGWVKWP*KSIGRCVVVMK*LNNSLMSIGVELVSN*AMHVRGLKAFTQGIKEMIQ*PSSWLSESVSNFRSPRLKLPN*GGPNHMGNSY*ILSYPKSH*KPVIIPSCFMKRYRSLRRRRLVRVQQL*RIMQVGHAGIGY*MLL*FL*SHNTV  5690

Range 8: 5164 to 5577 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
261.3 bits(564) 0.0 130/138(94%) 0/138(0%) Plus/Minus
Query      174  NSRTASSNMMGL*LAFNGILDRKESNKNFPYGLARLSLAASTWGFENLRRFRTAIRKVIESFPLCLG*MLSNLSHAXXXXXXXXXXXXXKNC*VTS*PQRTSRYSFKAILPTLLALVDSKLLRGMWVLNHSSFEHSDS  587
                NS TAS NMM L*LAFNGILDRKESNKNFPYGLARLSLAASTWGFENLRRFRTA+RKVIESFPLCLG*MLSNLSHALLSCSPVPPLCSSKNC*V S*PQRTSRYSFKAILPT LALVDS+LL+GMWVLNHSSFEHSDS
Subject   5164  NSCTAS*NMMEL*LAFNGILDRKESNKNFPYGLARLSLAASTWGFENLRRFRTAMRKVIESFPLCLG*MLSNLSHALLSCSPVPPLCSSKNC*VIS*PQRTSRYSFKAILPTHLALVDSRLLKGMWVLNHSSFEHSDS  5577

Range 9: 5631 to 5750 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
88.6 bits(187) 0.0 39/40(98%) 0/40(0%) Plus/Minus
Query        1  VGSKQGFAQL*LL*ACCQI*YSVVTS*KSEQHLIANPCMT  120
                VGSKQGFAQL*LL*ACCQI*YSVVTS*KSEQHLI NPCMT
Subject   5631  VGSKQGFAQL*LL*ACCQI*YSVVTS*KSEQHLITNPCMT  5750

Rupestris stem pitting associated virus 1, complete genome

Sequence ID: NC_001948.1 Length: 8744 Number of Matches: 9

Range 1: 5165 to 5749 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
445.1 bits(965) 0.0 188/195(96%) 0/195(0%) Plus/Minus
Query        2  LEASKGLPSFSYSKPVVKFSTVL*LHKNQSNI**PIPA*PTCMILYSCCTLTSLLRFKLPHRFIKHDGIMTGFQWDFG*ERI**EFPIWFGPPQFGSLNLGLRKFETLSDSHKEGY*IISFMPWVNAFKPLTCIAQLLTSSTSMLIKELLSHFITTTHLPILFQGHFTHPPGPG*LQITQGDVGFKPFFI*AF*L  586
                LEASKGLPSFSYSKPVVKFSTVL*LHKNQSNI**PIPA*PTCMILYSCCTLTSLLR KL +RF+KHDGIMTGFQWDFG*ERI**EFPIWFGPPQFGS NLGLRKFETLSDSH+EGY*IISFMPWVNAFKPLTCIAQLLTSST MLIKELLSHFITTTHLPILFQGHFTHPPGPG*LQITQGDVGFKPFFI*AF*L
Subject   5165  LEASKGLPSFSYSKPVVKFSTVL*LHKNQSNI**PIPA*PTCMILYSCCTLTSLLRLKLLYRFMKHDGIMTGFQWDFG*ERI**EFPIWFGPPQFGSFNLGLRKFETLSDSHEEGY*IISFMPWVNAFKPLTCIAQLLTSSTPMLIKELLSHFITTTHLPILFQGHFTHPPGPG*LQITQGDVGFKPFFI*AF*L  5749

Range 2: 5165 to 5749 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
432.2 bits(937) 0.0 189/195(97%) 0/195(0%) Minus/Plus
Query        2  ESECSNEEWFKTHIPLSNLESTRARRVGKMALKEYREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKIPLKASHNPIMFDEAVREFXXXXXXXXXATIENHAGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQ  586
                ESECSNEEWFKTHIPLSNLESTRAR VGKMALKEYREVRCGYE+TQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKIPLKASHN IMF EAV+EFEAK+ASKSAATIENHAGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQ
Subject   5165  ESECSNEEWFKTHIPLSNLESTRARWVGKMALKEYREVRCGYEMTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKIPLKASHNSIMFHEAVQEFEAKKASKSAATIENHAGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQ  5749

Range 3: 5163 to 5579 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
337.9 bits(731) 0.0 129/139(93%) 0/139(0%) Plus/Minus
Query      172  QTPAPLHQT*WDYDWLSMGFWIGKNLIRISHMVWPASVWQPQPGASKI*DAFGQP*GRLLNHFLYALGKCFQTSHMHCSVAHQFHLYAHQRTVESLHNHNAPPDTLSRPFYPPSWPWLTPNYSGGCGF*TILHLSILTP  588
                QTP PLH+T*W+YDWLSMGFWIGKNLIRISHMVWPASVWQ QPGASKI*DAFGQP*GRLLNHFLYALGKCFQTSHMHCSVAHQFH YAHQR VES HNHNAPPDTLSRPFYPP+WPWLTP+YS GCGF*TILHLSILTP
Subject   5163  QTPVPLHET*WNYDWLSMGFWIGKNLIRISHMVWPASVWQLQPGASKI*DAFGQP*GRLLNHFLYALGKCFQTSHMHCSVAHQFHPYAHQRIVESFHNHNAPPDTLSRPFYPPTWPWLTPDYSRGCGF*TILHLSILTP  5579

Range 4: 5626 to 5748 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
100.0 bits(212) 0.0 40/41(98%) 0/41(0%) Plus/Minus
Query        3  WKQARVCPALATLSLLSNLVQCCDFIKIRATSNSQSLHDLP  125
                WKQARVCPALATLSLLSNLVQCCDFIKIRATSN+QSLHDLP
Subject   5626  WKQARVCPALATLSLLSNLVQCCDFIKIRATSNNQSLHDLP  5748

Range 5: 5257 to 5748 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
346.6 bits(750) 0.0 153/164(93%) 0/164(0%) Minus/Plus
Query        3  LERVSGGALWL*SDSTVL**A*RWNW*ATEQCM*EV*KHLPKA*RK*FNNLPYGCPKASQIFEAPG*GCQTEAGQTIWEILIRFFPIQNPIESQS*SHHV**SGAGV*SEGG**ECSNYRESCR*VMQGLAIRCCSDFYEVTTLY*I*QQA*SS*SWANPCLLP  494
                LERVSGGALWL*+DST+L**A* WNW*ATEQCM*EV*KHLPKA*RK*FNNLP+GCPKASQIFEAPG* CQTEAGQTIWEILIRFFPIQNPIESQS* HHV *SG GV* E G**ECSNYRESCR*VMQGL IRCCSDFYEVTTLY*I*QQA*SS*SWANPCLLP
Subject   5257  LERVSGGALWL*NDSTIL**A*GWNW*ATEQCM*EV*KHLPKA*RK*FNNLPHGCPKASQIFEAPG*SCQTEAGQTIWEILIRFFPIQNPIESQS*FHHVS*SGTGV*GEEG**ECSNYRESCR*VMQGLVIRCCSDFYEVTTLY*I*QQA*SS*SWANPCLLP  5748

Range 6: 5164 to 5208 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.3 bits(73) 0.0 15/15(100%) 0/15(0%) Minus/Plus
Query      543  GVRMLK*RMV*NPHP  587
                GVRMLK*RMV*NPHP
Subject   5164  GVRMLK*RMV*NPHP  5208

Range 7: 5166 to 5690 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
350.2 bits(758) 0.0 167/175(95%) 0/175(0%) Minus/Plus
Query       61  SQNAQMKNGLKPTSP*VIWSQPGPGGWVKWP*KSIGRCVVVMK*LNSSLMSIEVELVSN*AMHVRGLKAFTQGIKEMIQ*PSLWLSESVSNFRSPRLRLPN*GGPNHMGNSY*ILSYPKSH*KPVIIPSCLMKRCGSLKXXXXXXXXXXXRIMQVGHAGIGY*MLL*FL*SHNTV  585
                SQNAQMKNGLKPTSP*VIWSQPGPGGWVKWP*KSIGRCVVVMK*LN+SLMSI VELVSN*AMHVRGLKAFTQGIKEMIQ*PS WLSESVSNFRSPRL+LPN*GGPNHMGNSY*ILSYPKSH*KPVIIPSC MKR  SL+RRRLVRVQQL*RIMQVGHAGIGY*MLL*FL*SHNTV
Subject   5166  SQNAQMKNGLKPTSP*VIWSQPGPGGWVKWP*KSIGRCVVVMK*LNNSLMSIGVELVSN*AMHVRGLKAFTQGIKEMIQ*PSSWLSESVSNFRSPRLKLPN*GGPNHMGNSY*ILSYPKSH*KPVIIPSCFMKRYRSLRRRRLVRVQQL*RIMQVGHAGIGY*MLL*FL*SHNTV  5690

Range 8: 5164 to 5577 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
261.3 bits(564) 0.0 130/138(94%) 0/138(0%) Plus/Minus
Query      174  NSRTASSNMMGL*LAFNGILDRKESNKNFPYGLARLSLAASTWGFENLRRFRTAIRKVIESFPLCLG*MLSNLSHAXXXXXXXXXXXXXKNC*VTS*PQRTSRYSFKAILPTLLALVDSKLLRGMWVLNHSSFEHSDS  587
                NS TAS NMM L*LAFNGILDRKESNKNFPYGLARLSLAASTWGFENLRRFRTA+RKVIESFPLCLG*MLSNLSHALLSCSPVPPLCSSKNC*V S*PQRTSRYSFKAILPT LALVDS+LL+GMWVLNHSSFEHSDS
Subject   5164  NSCTAS*NMMEL*LAFNGILDRKESNKNFPYGLARLSLAASTWGFENLRRFRTAMRKVIESFPLCLG*MLSNLSHALLSCSPVPPLCSSKNC*VIS*PQRTSRYSFKAILPTHLALVDSRLLKGMWVLNHSSFEHSDS  5577

Range 9: 5631 to 5750 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
88.6 bits(187) 0.0 39/40(98%) 0/40(0%) Plus/Minus
Query        1  VGSKQGFAQL*LL*ACCQI*YSVVTS*KSEQHLIANPCMT  120
                VGSKQGFAQL*LL*ACCQI*YSVVTS*KSEQHLI NPCMT
Subject   5631  VGSKQGFAQL*LL*ACCQI*YSVVTS*KSEQHLITNPCMT  5750

Grapevine rupestris stem pitting associated virus isolate GRSPAV 1050 02 RNA dependent RNA polymerase (RdRp) gene, partial cds; and triple gene block 1 (TGB1), triple gene block 2 (TGB2), triple gene block 3 (TGB3), coat protein (CP), and 14 kDa protein (14K) genes, complete cds

Sequence ID: JX513892.1 Length: 8716 Number of Matches: 9

Range 1: 5156 to 5740 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
438.2 bits(950) 0.0 185/195(95%) 0/195(0%) Plus/Minus
Query        2  LEASKGLPSFSYSKPVVKFSTVL*LHKNQSNI**PIPA*PTCMILYSCCTLTSLLRFKLPHRFIKHDGIMTGFQWDFG*ERI**EFPIWFGPPQFGSLNLGLRKFETLSDSHKEGY*IISFMPWVNAFKPLTCIAQLLTSSTSMLIKELLSHFITTTHLPILFQGHFTHPPGPG*LQITQGDVGFKPFFI*AF*L  586
                LEASKGLPSFSYSKPVVKFSTVL*LH+NQSNI* PIPA*PTCMILYSCCTLTSLLR KL HRF+KHDGIM GFQWDFG*ERI**EFPIWFGPPQFGS NLGLRK ETLSDSHKEGY*IISFMPWVNAFKPLTCIAQLLTSSTSMLIKELLSH ITTTHLPILFQGHFTHPPGPG* QITQGDVGFKPFFI*AF*L
Subject   5156  LEASKGLPSFSYSKPVVKFSTVL*LHENQSNI*QPIPA*PTCMILYSCCTLTSLLRLKLLHRFMKHDGIMAGFQWDFG*ERI**EFPIWFGPPQFGSFNLGLRKLETLSDSHKEGY*IISFMPWVNAFKPLTCIAQLLTSSTSMLIKELLSHIITTTHLPILFQGHFTHPPGPG*FQITQGDVGFKPFFI*AF*L  5740

Range 2: 5156 to 5740 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
432.2 bits(937) 0.0 189/195(97%) 0/195(0%) Minus/Plus
Query        2  ESECSNEEWFKTHIPLSNLESTRARRVGKMALKEYREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKIPLKASHNPIMFDEAVREFXXXXXXXXXATIENHAGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQ  586
                ESECSNEEWFKTHIPLSNLESTRAR VGKMALKEYREVRCGY+VTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKIPLKASHN IMF EAV+EFEAK+ASKSAATIENHAGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQ
Subject   5156  ESECSNEEWFKTHIPLSNLESTRARWVGKMALKEYREVRCGYDVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKIPLKASHNSIMFHEAVQEFEAKKASKSAATIENHAGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQ  5740

Range 3: 5154 to 5570 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
336.9 bits(729) 0.0 129/139(93%) 0/139(0%) Plus/Minus
Query      172  QTPAPLHQT*WDYDWLSMGFWIGKNLIRISHMVWPASVWQPQPGASKI*DAFGQP*GRLLNHFLYALGKCFQTSHMHCSVAHQFHLYAHQRTVESLHNHNAPPDTLSRPFYPPSWPWLTPNYSGGCGF*TILHLSILTP  588
                QTPAPLH+T*W+Y WLSMGFWIGKNLIRISHMVWPASVWQ QPGASK *DAFGQP*GRLLNHFLYALGKCFQTSHMHCSVAHQFHLYAHQR VES HNHNAPPDTLSRPFYPP+WPWL P+YSGGCGF*TILHLSILTP
Subject   5154  QTPAPLHET*WNYGWLSMGFWIGKNLIRISHMVWPASVWQLQPGASKT*DAFGQP*GRLLNHFLYALGKCFQTSHMHCSVAHQFHLYAHQRIVESHHNHNAPPDTLSRPFYPPTWPWLIPDYSGGCGF*TILHLSILTP  5570

Range 4: 5617 to 5739 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
100.0 bits(212) 0.0 40/41(98%) 0/41(0%) Plus/Minus
Query        3  WKQARVCPALATLSLLSNLVQCCDFIKIRATSNSQSLHDLP  125
                WKQARVCPALATLSLLSNLVQCCDF+KIRATSNSQSLHDLP
Subject   5617  WKQARVCPALATLSLLSNLVQCCDFMKIRATSNSQSLHDLP  5739

Range 5: 5248 to 5739 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
349.3 bits(756) 0.0 153/164(93%) 0/164(0%) Minus/Plus
Query        3  LERVSGGALWL*SDSTVL**A*RWNW*ATEQCM*EV*KHLPKA*RK*FNNLPYGCPKASQIFEAPG*GCQTEAGQTIWEILIRFFPIQNPIESQS*SHHV**SGAGV*SEGG**ECSNYRESCR*VMQGLAIRCCSDFYEVTTLY*I*QQA*SS*SWANPCLLP  494
                LERVSGGALWL* DST+L**A*RWNW*ATEQCM*EV*KHLPKA*RK*FNNLPYGCPKASQ+FEAPG* CQTEAGQTIWEILIRFFPIQNPIESQ * HHV *SGAGV* E G**ECSNYRESCR*VMQGLA+RCCSDF+EVTTLY*I*QQA*SS*SWANPCLLP
Subject   5248  LERVSGGALWL*CDSTIL**A*RWNW*ATEQCM*EV*KHLPKA*RK*FNNLPYGCPKASQVFEAPG*SCQTEAGQTIWEILIRFFPIQNPIESQP*FHHVS*SGAGV*GEEG**ECSNYRESCR*VMQGLAVRCCSDFHEVTTLY*I*QQA*SS*SWANPCLLP  5739

Range 6: 5155 to 5202 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
39.6 bits(80) 0.0 16/16(100%) 0/16(0%) Minus/Plus
Query      540  GVRMLK*RMV*NPHPP  587
                GVRMLK*RMV*NPHPP
Subject   5155  GVRMLK*RMV*NPHPP  5202

Range 7: 5157 to 5681 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
346.1 bits(749) 0.0 164/175(94%) 0/175(0%) Minus/Plus
Query       61  SQNAQMKNGLKPTSP*VIWSQPGPGGWVKWP*KSIGRCVVVMK*LNSSLMSIEVELVSN*AMHVRGLKAFTQGIKEMIQ*PSLWLSESVSNFRSPRLRLPN*GGPNHMGNSY*ILSYPKSH*KPVIIPSCLMKRCGSLKXXXXXXXXXXXRIMQVGHAGIGY*MLL*FL*SHNTV  585
                SQNAQMKNGLKPTSP*VIW+QPGPGGWVKWP*KSIGRCVVVM *LN+SLMSIEVELVSN*AMHVRGLKAFTQGIKEMIQ*PSLWLSESVS+FRSPRL+LPN*GGPNHMGNSY*ILSYPKSH*KP IIPSC MKRC SL+RRRLVRVQQL*RIMQVGHAGIG *MLL*F *SHNTV
Subject   5157  SQNAQMKNGLKPTSP*VIWNQPGPGGWVKWP*KSIGRCVVVMM*LNNSLMSIEVELVSN*AMHVRGLKAFTQGIKEMIQ*PSLWLSESVSSFRSPRLKLPN*GGPNHMGNSY*ILSYPKSH*KPAIIPSCFMKRCRSLRRRRLVRVQQL*RIMQVGHAGIGC*MLL*FS*SHNTV  5681

Range 8: 5155 to 5568 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
264.5 bits(571) 0.0 132/138(96%) 0/138(0%) Plus/Minus
Query      174  NSRTASSNMMGL*LAFNGILDRKESNKNFPYGLARLSLAASTWGFENLRRFRTAIRKVIESFPLCLG*MLSNLSHAXXXXXXXXXXXXXKNC*VTS*PQRTSRYSFKAILPTLLALVDSKLLRGMWVLNHSSFEHSDS  587
                NS TAS NMM L LAFNGILDRKESNKNFPYGLARLSLAASTWGFENLRRFRTAIRKVIESFPLCLG*MLSNLSHALLSCSPVPPLCSSKNC*VTS*PQRTSRYSFKAILPT LALVDS+LLRGMWVLNHSSFEHSDS
Subject   5155  NSCTAS*NMMELWLAFNGILDRKESNKNFPYGLARLSLAASTWGFENLRRFRTAIRKVIESFPLCLG*MLSNLSHALLSCSPVPPLCSSKNC*VTS*PQRTSRYSFKAILPTHLALVDSRLLRGMWVLNHSSFEHSDS  5568

Range 9: 5622 to 5741 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
88.1 bits(186) 0.0 39/40(98%) 0/40(0%) Plus/Minus
Query        1  VGSKQGFAQL*LL*ACCQI*YSVVTS*KSEQHLIANPCMT  120
                VGSKQGFAQL*LL*ACCQI*YSVVTS*KSEQHL ANPCMT
Subject   5622  VGSKQGFAQL*LL*ACCQI*YSVVTS*KSEQHLTANPCMT  5741

Grapevine rupestris stem pitting associated virus isolate ISA BR replicase, 24.4 kDa protein, 12.8 kDa protein, 8.4 kDa protein, and 28 kDa protein genes, complete cds

Sequence ID: KX925555.1 Length: 8659 Number of Matches: 9

Range 1: 5148 to 5732 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
437.3 bits(948) 0.0 185/195(95%) 0/195(0%) Plus/Minus
Query        2  LEASKGLPSFSYSKPVVKFSTVL*LHKNQSNI**PIPA*PTCMILYSCCTLTSLLRFKLPHRFIKHDGIMTGFQWDFG*ERI**EFPIWFGPPQFGSLNLGLRKFETLSDSHKEGY*IISFMPWVNAFKPLTCIAQLLTSSTSMLIKELLSHFITTTHLPILFQGHFTHPPGPG*LQITQGDVGFKPFFI*AF*L  586
                LEASKGLPSFSYSKPVVKF TVL*LHKNQ NI* PIPA*PTCMILYS CTLTSLLR KL HRF+KHDGIMTGFQWDFG*ERI**EFPIWFGPPQFGS NLGLRKFETLSDSHK+GY*IISFMPWVNAFKPLTCIAQLLTS TSMLIKELLSHFITTTHLPILFQGHFTHPPGPG*LQITQGDVGFKPFFI*AF*L
Subject   5148  LEASKGLPSFSYSKPVVKFGTVL*LHKNQGNI*QPIPA*PTCMILYSSCTLTSLLRLKLLHRFMKHDGIMTGFQWDFG*ERI**EFPIWFGPPQFGSFNLGLRKFETLSDSHKKGY*IISFMPWVNAFKPLTCIAQLLTSPTSMLIKELLSHFITTTHLPILFQGHFTHPPGPG*LQITQGDVGFKPFFI*AF*L  5732

Range 2: 5148 to 5732 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
433.6 bits(940) 0.0 190/195(97%) 0/195(0%) Minus/Plus
Query        2  ESECSNEEWFKTHIPLSNLESTRARRVGKMALKEYREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKIPLKASHNPIMFDEAVREFXXXXXXXXXATIENHAGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQ  586
                ESECSNEEWFKTHIPLSNLESTRAR VGKMALKEYREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKIPLKASHN IMF EAV+EFEAK+ASKSAATIENHAGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQ
Subject   5148  ESECSNEEWFKTHIPLSNLESTRARWVGKMALKEYREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKIPLKASHNSIMFHEAVQEFEAKKASKSAATIENHAGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQ  5732

Range 3: 5146 to 5562 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
343.3 bits(743) 0.0 132/139(95%) 0/139(0%) Plus/Minus
Query      172  QTPAPLHQT*WDYDWLSMGFWIGKNLIRISHMVWPASVWQPQPGASKI*DAFGQP*GRLLNHFLYALGKCFQTSHMHCSVAHQFHLYAHQRTVESLHNHNAPPDTLSRPFYPPSWPWLTPNYSGGCGF*TILHLSILTP  588
                QTPAPLH+T*W+YDWLSMGFWIGKNLIRISHMVWPASVWQ QPGASKI*DAFGQP* RLLNHFLYALGKCFQTSHMHCSVAHQ HLYAHQR VESLHNHNAPPDTLSRPFYPP+WPWLTPNYSGGCGF*TILHLSILTP
Subject   5146  QTPAPLHET*WNYDWLSMGFWIGKNLIRISHMVWPASVWQLQPGASKI*DAFGQP*ERLLNHFLYALGKCFQTSHMHCSVAHQSHLYAHQRIVESLHNHNAPPDTLSRPFYPPTWPWLTPNYSGGCGF*TILHLSILTP  5562

Range 4: 5609 to 5731 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.4 bits(215) 0.0 41/41(100%) 0/41(0%) Plus/Minus
Query        3  WKQARVCPALATLSLLSNLVQCCDFIKIRATSNSQSLHDLP  125
                WKQARVCPALATLSLLSNLVQCCDFIKIRATSNSQSLHDLP
Subject   5609  WKQARVCPALATLSLLSNLVQCCDFIKIRATSNSQSLHDLP  5731

Range 5: 5240 to 5731 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
342.4 bits(741) 0.0 152/164(93%) 0/164(0%) Minus/Plus
Query        3  LERVSGGALWL*SDSTVL**A*RWNW*ATEQCM*EV*KHLPKA*RK*FNNLPYGCPKASQIFEAPG*GCQTEAGQTIWEILIRFFPIQNPIESQS*SHHV**SGAGV*SEGG**ECSNYRESCR*VMQGLAIRCCSDFYEVTTLY*I*QQA*SS*SWANPCLLP  494
                LERVSGGALWL*SDST+L**A*RW+W*ATEQCM*EV*KHLPKA*RK*FNNL YGCPKASQIFEAPG* CQTEAGQTIWEILIRFFPIQNPIESQS* HHV *SGAGV* E G**ECS YRESCR*VMQGLA+RCC DFYEVTTLY I*QQA*SS*SWANPCLLP
Subject   5240  LERVSGGALWL*SDSTIL**A*RWDW*ATEQCM*EV*KHLPKA*RK*FNNLSYGCPKASQIFEAPG*SCQTEAGQTIWEILIRFFPIQNPIESQS*FHHVS*SGAGV*GEEG**ECSYYRESCR*VMQGLAVRCCPDFYEVTTLYQI*QQA*SS*SWANPCLLP  5731

Range 6: 5147 to 5194 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
39.6 bits(80) 0.0 16/16(100%) 0/16(0%) Minus/Plus
Query      540  GVRMLK*RMV*NPHPP  587
                GVRMLK*RMV*NPHPP
Subject   5147  GVRMLK*RMV*NPHPP  5194

Range 7: 5149 to 5673 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
347.9 bits(753) 0.0 165/175(94%) 0/175(0%) Minus/Plus
Query       61  SQNAQMKNGLKPTSP*VIWSQPGPGGWVKWP*KSIGRCVVVMK*LNSSLMSIEVELVSN*AMHVRGLKAFTQGIKEMIQ*PSLWLSESVSNFRSPRLRLPN*GGPNHMGNSY*ILSYPKSH*KPVIIPSCLMKRCGSLKXXXXXXXXXXXRIMQVGHAGIGY*MLL*FL*SHNTV  585
                SQNAQMKNGLKPTSP*VIWSQPGPGGWVKWP*KSIGRCVVVMK*LN+SLMSIEV LVSN*AMHVRGLKAFTQGIKEMIQ*P LWLSESVSNFRSPRL+LPN*GGPNHMGNSY*ILSYPKSH*KPVIIPSC MKRC SL+RRRLVRVQ L*RIMQVGHAGIG *ML *FL*SHNTV
Subject   5149  SQNAQMKNGLKPTSP*VIWSQPGPGGWVKWP*KSIGRCVVVMK*LNNSLMSIEVGLVSN*AMHVRGLKAFTQGIKEMIQ*PFLWLSESVSNFRSPRLKLPN*GGPNHMGNSY*ILSYPKSH*KPVIIPSCFMKRCRSLRRRRLVRVQLL*RIMQVGHAGIGC*MLP*FL*SHNTV  5673

Range 8: 5147 to 5560 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
268.2 bits(579) 0.0 134/138(97%) 0/138(0%) Plus/Minus
Query      174  NSRTASSNMMGL*LAFNGILDRKESNKNFPYGLARLSLAASTWGFENLRRFRTAIRKVIESFPLCLG*MLSNLSHAXXXXXXXXXXXXXKNC*VTS*PQRTSRYSFKAILPTLLALVDSKLLRGMWVLNHSSFEHSDS  587
                NS TAS NMM L*LAFNGILDRKESNKNFPYGLARLSLAASTWGFENLRRFRTAIRKVIESFPLCLG*MLSNLSHALLSCSPVPPLCSSKNC*VTS*PQRTSRYSFKAILPT LALVDSKLLRGMWVLNHSSFEHSDS
Subject   5147  NSCTAS*NMMEL*LAFNGILDRKESNKNFPYGLARLSLAASTWGFENLRRFRTAIRKVIESFPLCLG*MLSNLSHALLSCSPVPPLCSSKNC*VTS*PQRTSRYSFKAILPTHLALVDSKLLRGMWVLNHSSFEHSDS  5560

Range 9: 5614 to 5733 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.6 bits(174) 0.0 37/40(92%) 0/40(0%) Plus/Minus
Query        1  VGSKQGFAQL*LL*ACCQI*YSVVTS*KSEQHLIANPCMT  120
                VGSKQGFAQL*LL*ACCQI YSVVTS*KS QHL ANPCMT
Subject   5614  VGSKQGFAQL*LL*ACCQIWYSVVTS*KSGQHLTANPCMT  5733

Grapevine Rupestris stem pitting associated virus, complete genome

Sequence ID: AF026278.1 Length: 8725 Number of Matches: 9

Range 1: 5164 to 5748 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
434.1 bits(941) 0.0 186/195(95%) 0/195(0%) Plus/Minus
Query        2  LEASKGLPSFSYSKPVVKFSTVL*LHKNQSNI**PIPA*PTCMILYSCCTLTSLLRFKLPHRFIKHDGIMTGFQWDFG*ERI**EFPIWFGPPQFGSLNLGLRKFETLSDSHKEGY*IISFMPWVNAFKPLTCIAQLLTSSTSMLIKELLSHFITTTHLPILFQGHFTHPPGPG*LQITQGDVGFKPFFI*AF*L  586
                LEASKGLPSFSYSKPVVKFSTVL*LHKNQSNI* PIPA*PTCMILYS CTLTSLLR KL HRF+KHDGIMTGF WD G*ERI**EFPIWFGPPQFGS NL LRKFETLSDSHKEGY*IISFMPWVNAFKPLTCIAQLLTSSTSMLIKELLSHFITTTHLPILFQGHFTHPPGPG*LQITQGDVGFKPFFI*AF*L
Subject   5164  LEASKGLPSFSYSKPVVKFSTVL*LHKNQSNI*QPIPA*PTCMILYSRCTLTSLLRLKLLHRFLKHDGIMTGF*WDLG*ERI**EFPIWFGPPQFGSFNLRLRKFETLSDSHKEGY*IISFMPWVNAFKPLTCIAQLLTSSTSMLIKELLSHFITTTHLPILFQGHFTHPPGPG*LQITQGDVGFKPFFI*AF*L  5748

Range 2: 5164 to 5748 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
434.1 bits(941) 0.0 190/195(97%) 0/195(0%) Minus/Plus
Query        2  ESECSNEEWFKTHIPLSNLESTRARRVGKMALKEYREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKIPLKASHNPIMFDEAVREFXXXXXXXXXATIENHAGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQ  586
                ESECSNEEWFKTHIPLSNLESTRAR VGKMALKEYREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKIPLKASHN IMF EAV+EFEAK+ASKSAATIENHAGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQ
Subject   5164  ESECSNEEWFKTHIPLSNLESTRARWVGKMALKEYREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKIPLKASHNSIMFQEAVQEFEAKKASKSAATIENHAGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQ  5748

Range 3: 5162 to 5578 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
336.0 bits(727) 0.0 130/139(94%) 0/139(0%) Plus/Minus
Query      172  QTPAPLHQT*WDYDWLSMGFWIGKNLIRISHMVWPASVWQPQPGASKI*DAFGQP*GRLLNHFLYALGKCFQTSHMHCSVAHQFHLYAHQRTVESLHNHNAPPDTLSRPFYPPSWPWLTPNYSGGCGF*TILHLSILTP  588
                QTPAPL +T*W+YDWL MG WIGKNLIRISHMVWPASVWQ QP ASKI*DAFGQP*GRLLNHFLYALGKCFQTSHMHCSVAHQFHLYAHQR VESLHNHNAPPDTLSRPFYPP+WPWLTPNYSGGCGF*TILHLSILTP
Subject   5162  QTPAPLPET*WNYDWLLMGSWIGKNLIRISHMVWPASVWQLQPEASKI*DAFGQP*GRLLNHFLYALGKCFQTSHMHCSVAHQFHLYAHQRIVESLHNHNAPPDTLSRPFYPPTWPWLTPNYSGGCGF*TILHLSILTP  5578

Range 4: 5625 to 5747 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.4 bits(215) 0.0 41/41(100%) 0/41(0%) Plus/Minus
Query        3  WKQARVCPALATLSLLSNLVQCCDFIKIRATSNSQSLHDLP  125
                WKQARVCPALATLSLLSNLVQCCDFIKIRATSNSQSLHDLP
Subject   5625  WKQARVCPALATLSLLSNLVQCCDFIKIRATSNSQSLHDLP  5747

Range 5: 5256 to 5747 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
344.3 bits(745) 0.0 152/164(93%) 0/164(0%) Minus/Plus
Query        3  LERVSGGALWL*SDSTVL**A*RWNW*ATEQCM*EV*KHLPKA*RK*FNNLPYGCPKASQIFEAPG*GCQTEAGQTIWEILIRFFPIQNPIESQS*SHHV**SGAGV*SEGG**ECSNYRESCR*VMQGLAIRCCSDFYEVTTLY*I*QQA*SS*SWANPCLLP  494
                LERVSGGALWL*SDST+L**A*RWNW*ATEQCM*EV*KHLPKA*RK*FNNLPYGCPKASQIFEA G* CQTEAGQTIWEILIRFFPIQ+PI+SQS* HHV  SGAGV* E G**ECS+YRESCR*VMQGLA+RCCSDFYEVTTLY*I*QQA*SS*SWANPCLLP
Subject   5256  LERVSGGALWL*SDSTIL**A*RWNW*ATEQCM*EV*KHLPKA*RK*FNNLPYGCPKASQIFEASG*SCQTEAGQTIWEILIRFFPIQDPIKSQS*FHHVSGSGAGV*GEEG**ECSDYRESCR*VMQGLAVRCCSDFYEVTTLY*I*QQA*SS*SWANPCLLP  5747

Range 6: 5163 to 5210 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
39.6 bits(80) 0.0 16/16(100%) 0/16(0%) Minus/Plus
Query      540  GVRMLK*RMV*NPHPP  587
                GVRMLK*RMV*NPHPP
Subject   5163  GVRMLK*RMV*NPHPP  5210

Range 7: 5165 to 5689 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
348.4 bits(754) 0.0 165/175(94%) 0/175(0%) Minus/Plus
Query       61  SQNAQMKNGLKPTSP*VIWSQPGPGGWVKWP*KSIGRCVVVMK*LNSSLMSIEVELVSN*AMHVRGLKAFTQGIKEMIQ*PSLWLSESVSNFRSPRLRLPN*GGPNHMGNSY*ILSYPKSH*KPVIIPSCLMKRCGSLKXXXXXXXXXXXRIMQVGHAGIGY*MLL*FL*SHNTV  585
                SQNAQMKNGLKPTSP*VIWSQPGPGGWVKWP*KSIGRCVVVMK*LN+SLMSIEVELVSN*AMHVRGLKAFTQGIKEMIQ*PSLWLSESVSNFRS RL+LPN*GGPNHMGNSY*ILSYP+SH*KPVIIPSC  KRC SL+RRRLVRVQ+L*RIMQVGHAGIG *MLL*FL*SHNTV
Subject   5165  SQNAQMKNGLKPTSP*VIWSQPGPGGWVKWP*KSIGRCVVVMK*LNNSLMSIEVELVSN*AMHVRGLKAFTQGIKEMIQ*PSLWLSESVSNFRSLRLKLPN*GGPNHMGNSY*ILSYPRSH*KPVIIPSCFRKRCRSLRRRRLVRVQRL*RIMQVGHAGIGC*MLL*FL*SHNTV  5689

Range 8: 5163 to 5576 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
261.3 bits(564) 0.0 133/138(96%) 0/138(0%) Plus/Minus
Query      174  NSRTASSNMMGL*LAFNGILDRKESNKNFPYGLARLSLAASTWGFENLRRFRTAIRKVIESFPLCLG*MLSNLSHAXXXXXXXXXXXXXKNC*VTS*PQRTSRYSFKAILPTLLALVDSKLLRGMWVLNHSSFEHSDS  587
                NS TAS NMM L*LAFNGILDRKESNKNFPYGLARLSLAAST GFENLRRFRTAIRKVIESFPLCLG*MLSNLSHALLSCSPVPPLCSSKNC*VTS*PQRTSRYSFKAILPT LALVDSKLLRGMWVLNHSSFEHSDS
Subject   5163  NSCTAS*NMMEL*LAFNGILDRKESNKNFPYGLARLSLAAST*GFENLRRFRTAIRKVIESFPLCLG*MLSNLSHALLSCSPVPPLCSSKNC*VTS*PQRTSRYSFKAILPTHLALVDSKLLRGMWVLNHSSFEHSDS  5576

Range 9: 5630 to 5749 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
88.1 bits(186) 0.0 39/40(98%) 0/40(0%) Plus/Minus
Query        1  VGSKQGFAQL*LL*ACCQI*YSVVTS*KSEQHLIANPCMT  120
                VGSKQGFAQL*LL*ACCQI*YSVVTS*KSEQHL ANPCMT
Subject   5630  VGSKQGFAQL*LL*ACCQI*YSVVTS*KSEQHLTANPCMT  5749

Nucleotide Sequence (440 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 2 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
44
88
132
176
220
264
308
352
396
440

Descriptions

Alignments

Rupestris stem pitting associated virus 1, complete genome

Sequence ID: AF057136.1 Length: 8744 Number of Matches: 8

Range 1: 7028 to 7423 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
320.4 bits(693) 0.0 130/132(98%) 0/132(0%) Plus/Plus
Query       45  TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWLGHWACAAFSEEVKSALFRGQHPSIPSRWALQRRYKKYNLL  440
                TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWLGHWACAAFSEEVKS LFRGQHPSIPSRWALQ RYKKYNLL
Subject   7028  TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWLGHWACAAFSEEVKSTLFRGQHPSIPSRWALQGRYKKYNLL  7423

Range 2: 7012 to 7422 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
315.4 bits(682) 0.0 133/137(97%) 0/137(0%) Minus/Minus
Query       29  SKLYFLYRLCNAHREGIDGCCPLNKADLTSSENAAQAQCPSQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSEL*ATARSTASLPKHINTPSTSSVKGDPT  439
                SKLYFLYR CNAHREGIDGCCPLNK DLTSSENAAQAQCPSQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSEL ATARSTASLPKHI+TPSTSSVKGDPT
Subject   7012  SKLYFLYRPCNAHREGIDGCCPLNKVDLTSSENAAQAQCPSQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSELCATARSTASLPKHISTPSTSSVKGDPT  7422

Range 3: 6989 to 7423 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
313.6 bits(678) 0.0 134/145(92%) 0/145(0%) Minus/Minus
Query        6  Q*VILFVPSL*RPP*GN*WMLSPE*GRFDLLRKCSTSPMPKPTVNGVMVFAQFTGG*KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVVSNSEIHCLLTKAY*HPFNI*CKRRPHTSPKHTLS  440
                Q*VILFVPSL*RPP*GN*WMLSPE*GRFD LRKCSTSPMPKPTVNGVMVFAQF G *KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVV NSEIHCLLTKAY*HPFNI*CKRRPH     T++
Subject   6989  Q*VILFVPSL*RPP*GN*WMLSPE*GRFDFLRKCSTSPMPKPTVNGVMVFAQFAGC*KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVVRNSEIHCLLTKAY*HPFNI*CKRRPHNDFVQTVT  7423

Range 4: 7011 to 7421 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
291.6 bits(630) 0.0 132/137(96%) 0/137(0%) Plus/Plus
Query       28  VWGRLLH*MLKGC*YALVRRQWIXXXXXXXXXXYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQPPVNWAKTITPLTVGLGIGLVLHFLRRSNLPYSGDNIHQFPHGGRYRDGTKSITY  438
                +WGRLLH*MLKGC*YALVRRQWISLL TTLNSNYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQ P NWAKTITPLTVGLGIGLVLHFLR+SNLPYSGDNIHQFPHGGRYRDGTKSITY
Subject   7011  LWGRLLH*MLKGC*YALVRRQWISLLRTTLNSNYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQQPANWAKTITPLTVGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITY  7421

Range 5: 7149 to 7421 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
201.3 bits(433) 0.0 86/91(95%) 0/91(0%) Minus/Minus
Query      166  VSYTFCTVSVTPTVRELMDVVP*IRQI*PPQKMQHKPNAQANCQWSYGFCPIHRRLKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKE  438
                VSYTFCTV VTPTVRELMDVVP*IR I* PQKMQHKPNAQANCQWSYGFCPI R LKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKE
Subject   7149  VSYTFCTVPVTPTVRELMDVVP*IR*I*LPQKMQHKPNAQANCQWSYGFCPIRRLLKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKE  7421

Range 6: 7014 to 7118 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.4 bits(167) 0.0 33/35(94%) 0/35(0%) Minus/Minus
Query       31  HKVI*IQSCEQQRDPLPPYQSILTPLQHLV*KATP  135
                HKVI*IQSC QQRDPLPPYQSIL PLQHLV*KATP
Subject   7014  HKVI*IQSCAQQRDPLPPYQSILAPLQHLV*KATP  7118

Range 7: 7156 to 7422 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
192.1 bits(413) 0.0 84/89(94%) 0/89(0%) Plus/Plus
Query      173  EIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFSRL*IGQKP*LH*QLAWALGLCCIF*GGQICLIQGTTSINSLTVGVTETVQKV*LT  439
                EIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFS L IGQKP*LH*QLAWALGLCCIF*G QI LIQGTTSINSLTVGVT TVQKV*LT
Subject   7156  EIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFSSLRIGQKP*LH*QLAWALGLCCIF*GSQIYLIQGTTSINSLTVGVTGTVQKV*LT  7422

Range 8: 7012 to 7119 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.0 bits(177) 0.0 34/36(94%) 0/36(0%) Plus/Plus
Query       29  CGVAFYTRC*RGVNMLW*GGSGSRCCSQL*IQITL*  136
                CGVAFYTRC*RG NMLW*GGSGSRCC+QL*IQITL*
Subject   7012  CGVAFYTRC*RGANMLW*GGSGSRCCAQL*IQITL*  7119

Rupestris stem pitting associated virus 1, complete genome

Sequence ID: NC_001948.1 Length: 8744 Number of Matches: 8

Range 1: 7028 to 7423 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
320.4 bits(693) 0.0 130/132(98%) 0/132(0%) Plus/Plus
Query       45  TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWLGHWACAAFSEEVKSALFRGQHPSIPSRWALQRRYKKYNLL  440
                TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWLGHWACAAFSEEVKS LFRGQHPSIPSRWALQ RYKKYNLL
Subject   7028  TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWLGHWACAAFSEEVKSTLFRGQHPSIPSRWALQGRYKKYNLL  7423

Range 2: 7012 to 7422 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
315.4 bits(682) 0.0 133/137(97%) 0/137(0%) Minus/Minus
Query       29  SKLYFLYRLCNAHREGIDGCCPLNKADLTSSENAAQAQCPSQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSEL*ATARSTASLPKHINTPSTSSVKGDPT  439
                SKLYFLYR CNAHREGIDGCCPLNK DLTSSENAAQAQCPSQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSEL ATARSTASLPKHI+TPSTSSVKGDPT
Subject   7012  SKLYFLYRPCNAHREGIDGCCPLNKVDLTSSENAAQAQCPSQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSELCATARSTASLPKHISTPSTSSVKGDPT  7422

Range 3: 6989 to 7423 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
313.6 bits(678) 0.0 134/145(92%) 0/145(0%) Minus/Minus
Query        6  Q*VILFVPSL*RPP*GN*WMLSPE*GRFDLLRKCSTSPMPKPTVNGVMVFAQFTGG*KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVVSNSEIHCLLTKAY*HPFNI*CKRRPHTSPKHTLS  440
                Q*VILFVPSL*RPP*GN*WMLSPE*GRFD LRKCSTSPMPKPTVNGVMVFAQF G *KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVV NSEIHCLLTKAY*HPFNI*CKRRPH     T++
Subject   6989  Q*VILFVPSL*RPP*GN*WMLSPE*GRFDFLRKCSTSPMPKPTVNGVMVFAQFAGC*KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVVRNSEIHCLLTKAY*HPFNI*CKRRPHNDFVQTVT  7423

Range 4: 7011 to 7421 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
291.6 bits(630) 0.0 132/137(96%) 0/137(0%) Plus/Plus
Query       28  VWGRLLH*MLKGC*YALVRRQWIXXXXXXXXXXYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQPPVNWAKTITPLTVGLGIGLVLHFLRRSNLPYSGDNIHQFPHGGRYRDGTKSITY  438
                +WGRLLH*MLKGC*YALVRRQWISLL TTLNSNYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQ P NWAKTITPLTVGLGIGLVLHFLR+SNLPYSGDNIHQFPHGGRYRDGTKSITY
Subject   7011  LWGRLLH*MLKGC*YALVRRQWISLLRTTLNSNYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQQPANWAKTITPLTVGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITY  7421

Range 5: 7149 to 7421 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
201.3 bits(433) 0.0 86/91(95%) 0/91(0%) Minus/Minus
Query      166  VSYTFCTVSVTPTVRELMDVVP*IRQI*PPQKMQHKPNAQANCQWSYGFCPIHRRLKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKE  438
                VSYTFCTV VTPTVRELMDVVP*IR I* PQKMQHKPNAQANCQWSYGFCPI R LKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKE
Subject   7149  VSYTFCTVPVTPTVRELMDVVP*IR*I*LPQKMQHKPNAQANCQWSYGFCPIRRLLKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKE  7421

Range 6: 7014 to 7118 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.4 bits(167) 0.0 33/35(94%) 0/35(0%) Minus/Minus
Query       31  HKVI*IQSCEQQRDPLPPYQSILTPLQHLV*KATP  135
                HKVI*IQSC QQRDPLPPYQSIL PLQHLV*KATP
Subject   7014  HKVI*IQSCAQQRDPLPPYQSILAPLQHLV*KATP  7118

Range 7: 7156 to 7422 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
192.1 bits(413) 0.0 84/89(94%) 0/89(0%) Plus/Plus
Query      173  EIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFSRL*IGQKP*LH*QLAWALGLCCIF*GGQICLIQGTTSINSLTVGVTETVQKV*LT  439
                EIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFS L IGQKP*LH*QLAWALGLCCIF*G QI LIQGTTSINSLTVGVT TVQKV*LT
Subject   7156  EIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFSSLRIGQKP*LH*QLAWALGLCCIF*GSQIYLIQGTTSINSLTVGVTGTVQKV*LT  7422

Range 8: 7012 to 7119 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.0 bits(177) 0.0 34/36(94%) 0/36(0%) Plus/Plus
Query       29  CGVAFYTRC*RGVNMLW*GGSGSRCCSQL*IQITL*  136
                CGVAFYTRC*RG NMLW*GGSGSRCC+QL*IQITL*
Subject   7012  CGVAFYTRC*RGANMLW*GGSGSRCCAQL*IQITL*  7119

Grapevine rupestris stem pitting associated virus isolate GRSPAV 1050 02 RNA dependent RNA polymerase (RdRp) gene, partial cds; and triple gene block 1 (TGB1), triple gene block 2 (TGB2), triple gene block 3 (TGB3), coat protein (CP), and 14 kDa protein (14K) genes, complete cds

Sequence ID: JX513892.1 Length: 8716 Number of Matches: 8

Range 1: 7019 to 7414 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
320.4 bits(693) 0.0 130/132(98%) 0/132(0%) Plus/Plus
Query       45  TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWLGHWACAAFSEEVKSALFRGQHPSIPSRWALQRRYKKYNLL  440
                TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWLGHWACAAFSEEVKS LFRGQHPSIPSRWALQ RYKKYNLL
Subject   7019  TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWLGHWACAAFSEEVKSTLFRGQHPSIPSRWALQGRYKKYNLL  7414

Range 2: 7003 to 7413 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
315.4 bits(682) 0.0 133/137(97%) 0/137(0%) Minus/Minus
Query       29  SKLYFLYRLCNAHREGIDGCCPLNKADLTSSENAAQAQCPSQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSEL*ATARSTASLPKHINTPSTSSVKGDPT  439
                SKLYFLYR CNAHREGIDGCCPLNK DLTSSENAAQAQCPSQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSEL ATARSTASLPKHI+TPSTSSVKGDPT
Subject   7003  SKLYFLYRPCNAHREGIDGCCPLNKVDLTSSENAAQAQCPSQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSELCATARSTASLPKHISTPSTSSVKGDPT  7413

Range 3: 6980 to 7414 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
313.6 bits(678) 0.0 134/145(92%) 0/145(0%) Minus/Minus
Query        6  Q*VILFVPSL*RPP*GN*WMLSPE*GRFDLLRKCSTSPMPKPTVNGVMVFAQFTGG*KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVVSNSEIHCLLTKAY*HPFNI*CKRRPHTSPKHTLS  440
                Q*VILFVPSL*RPP*GN*WMLSPE*GRFD LRKCSTSPMPKPTVNGVMVFAQF G *KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVV NSEIHCLLTKAY*HPFNI*CKRRPH     T++
Subject   6980  Q*VILFVPSL*RPP*GN*WMLSPE*GRFDFLRKCSTSPMPKPTVNGVMVFAQFAGC*KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVVCNSEIHCLLTKAY*HPFNI*CKRRPHNDFVQTVT  7414

Range 4: 7002 to 7412 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
291.6 bits(630) 0.0 132/137(96%) 0/137(0%) Plus/Plus
Query       28  VWGRLLH*MLKGC*YALVRRQWIXXXXXXXXXXYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQPPVNWAKTITPLTVGLGIGLVLHFLRRSNLPYSGDNIHQFPHGGRYRDGTKSITY  438
                +WGRLLH*MLKGC*YALVRRQWISLL TTLNSNYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQ P NWAKTITPLTVGLGIGLVLHFLR+SNLPYSGDNIHQFPHGGRYRDGTKSITY
Subject   7002  LWGRLLH*MLKGC*YALVRRQWISLLHTTLNSNYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQQPANWAKTITPLTVGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITY  7412

Range 5: 7140 to 7412 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
201.3 bits(433) 0.0 86/91(95%) 0/91(0%) Minus/Minus
Query      166  VSYTFCTVSVTPTVRELMDVVP*IRQI*PPQKMQHKPNAQANCQWSYGFCPIHRRLKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKE  438
                VSYTFCTV VTPTVRELMDVVP*IR I* PQKMQHKPNAQANCQWSYGFCPI R LKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKE
Subject   7140  VSYTFCTVPVTPTVRELMDVVP*IR*I*LPQKMQHKPNAQANCQWSYGFCPIRRLLKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKE  7412

Range 6: 7005 to 7109 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.0 bits(166) 0.0 33/35(94%) 0/35(0%) Minus/Minus
Query       31  HKVI*IQSCEQQRDPLPPYQSILTPLQHLV*KATP  135
                HKVI*IQSC QQRDPLPPYQSIL PLQHLV*KATP
Subject   7005  HKVI*IQSCVQQRDPLPPYQSILAPLQHLV*KATP  7109

Range 7: 7147 to 7413 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
192.1 bits(413) 0.0 84/89(94%) 0/89(0%) Plus/Plus
Query      173  EIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFSRL*IGQKP*LH*QLAWALGLCCIF*GGQICLIQGTTSINSLTVGVTETVQKV*LT  439
                EIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFS L IGQKP*LH*QLAWALGLCCIF*G QI LIQGTTSINSLTVGVT TVQKV*LT
Subject   7147  EIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFSSLRIGQKP*LH*QLAWALGLCCIF*GSQIYLIQGTTSINSLTVGVTGTVQKV*LT  7413

Range 8: 7003 to 7110 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.0 bits(177) 0.0 34/36(94%) 0/36(0%) Plus/Plus
Query       29  CGVAFYTRC*RGVNMLW*GGSGSRCCSQL*IQITL*  136
                CGVAFYTRC*RG NMLW*GGSGSRCC+QL*IQITL*
Subject   7003  CGVAFYTRC*RGANMLW*GGSGSRCCTQL*IQITL*  7110

UNVERIFIED: Grapevine rupestris stem pitting associated virus isolate TI_30 genomic sequence

Sequence ID: KT000368.1 Length: 8568 Number of Matches: 8

Range 1: 6908 to 7303 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
316.8 bits(685) 0.0 128/132(97%) 0/132(0%) Plus/Plus
Query       45  TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWLGHWACAAFSEEVKSALFRGQHPSIPSRWALQRRYKKYNLL  440
                TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFN+VTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSW GHWACAAFSEEVKS LFRGQHPSIPSRWALQ RYKKYNLL
Subject   6908  TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNIVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWPGHWACAAFSEEVKSTLFRGQHPSIPSRWALQGRYKKYNLL  7303

Range 2: 6892 to 7302 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
310.8 bits(672) 0.0 131/137(96%) 0/137(0%) Minus/Minus
Query       29  SKLYFLYRLCNAHREGIDGCCPLNKADLTSSENAAQAQCPSQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSEL*ATARSTASLPKHINTPSTSSVKGDPT  439
                SKLYFLYR CNAHREGIDGCCPLNK DLTSSENAAQAQCP QLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVT LKVEPLTSQGNLNSEL ATARSTASLPKHI+TPSTSSVKGDPT
Subject   6892  SKLYFLYRPCNAHREGIDGCCPLNKVDLTSSENAAQAQCPGQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTMLKVEPLTSQGNLNSELCATARSTASLPKHISTPSTSSVKGDPT  7302

Range 3: 6869 to 7303 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
309.4 bits(669) 0.0 132/145(91%) 0/145(0%) Minus/Minus
Query        6  Q*VILFVPSL*RPP*GN*WMLSPE*GRFDLLRKCSTSPMPKPTVNGVMVFAQFTGG*KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVVSNSEIHCLLTKAY*HPFNI*CKRRPHTSPKHTLS  440
                Q*VILFVPSL*RPP*GN*WMLSPE*GRFD LRKCSTSPMP+PTVNGVMVFAQF G *KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR* EFRVV NSEIHCLLTKAY*HPFNI*CKRRPH     T++
Subject   6869  Q*VILFVPSL*RPP*GN*WMLSPE*GRFDFLRKCSTSPMPRPTVNGVMVFAQFAGC*KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*LEFRVVRNSEIHCLLTKAY*HPFNI*CKRRPHNDFVQTVT  7303

Range 4: 6891 to 7301 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
291.6 bits(630) 0.0 131/137(96%) 0/137(0%) Plus/Plus
Query       28  VWGRLLH*MLKGC*YALVRRQWIXXXXXXXXXXYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQPPVNWAKTITPLTVGLGIGLVLHFLRRSNLPYSGDNIHQFPHGGRYRDGTKSITY  438
                +WGRLLH*MLKGC*YALVRRQWISLL TTLNS+YLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQ P NWAKTITPLTVGLGIGLVLHFLR+SNLPYSGDNIHQFPHGGRYRDGTKSITY
Subject   6891  LWGRLLH*MLKGC*YALVRRQWISLLRTTLNSSYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQQPANWAKTITPLTVGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITY  7301

Range 5: 7029 to 7301 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
201.3 bits(433) 0.0 86/91(95%) 0/91(0%) Minus/Minus
Query      166  VSYTFCTVSVTPTVRELMDVVP*IRQI*PPQKMQHKPNAQANCQWSYGFCPIHRRLKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKE  438
                VSYTFCTV VTPTVRELMDVVP*IR I* PQKMQHKPNAQANCQWSYGFCPI R LKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKE
Subject   7029  VSYTFCTVPVTPTVRELMDVVP*IR*I*LPQKMQHKPNAQANCQWSYGFCPIRRLLKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKE  7301

Range 6: 6894 to 6998 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
77.1 bits(162) 0.0 32/35(91%) 0/35(0%) Minus/Minus
Query       31  HKVI*IQSCEQQRDPLPPYQSILTPLQHLV*KATP  135
                HKV *IQSC QQRDPLPPYQSIL PLQHLV*KATP
Subject   6894  HKVT*IQSCAQQRDPLPPYQSILAPLQHLV*KATP  6998

Range 7: 7036 to 7302 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
192.1 bits(413) 0.0 84/89(94%) 0/89(0%) Plus/Plus
Query      173  EIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFSRL*IGQKP*LH*QLAWALGLCCIF*GGQICLIQGTTSINSLTVGVTETVQKV*LT  439
                EIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFS L IGQKP*LH*QLAWALGLCCIF*G QI LIQGTTSINSLTVGVT TVQKV*LT
Subject   7036  EIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFSSLRIGQKP*LH*QLAWALGLCCIF*GSQIYLIQGTTSINSLTVGVTGTVQKV*LT  7302

Range 8: 6892 to 6999 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.5 bits(176) 0.0 33/36(92%) 0/36(0%) Plus/Plus
Query       29  CGVAFYTRC*RGVNMLW*GGSGSRCCSQL*IQITL*  136
                CGVAFYTRC*RG NMLW*GGSGSRCC+QL*IQ+TL*
Subject   6892  CGVAFYTRC*RGANMLW*GGSGSRCCAQL*IQVTL*  6999

Grapevine rupestris stem pitting associated virus isolate GRSPaV GG, complete genome

Sequence ID: JQ922417.1 Length: 8758 Number of Matches: 8

Range 1: 7027 to 7422 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
316.3 bits(684) 0.0 128/132(97%) 0/132(0%) Plus/Plus
Query       45  TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWLGHWACAAFSEEVKSALFRGQHPSIPSRWALQRRYKKYNLL  440
                TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWLGHW CAAFSEEVKS LFRGQHPSIP RWALQ RYKKYNLL
Subject   7027  TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWLGHWTCAAFSEEVKSTLFRGQHPSIPPRWALQGRYKKYNLL  7422

Range 2: 7011 to 7421 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
312.6 bits(676) 0.0 132/137(96%) 0/137(0%) Minus/Minus
Query       29  SKLYFLYRLCNAHREGIDGCCPLNKADLTSSENAAQAQCPSQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSEL*ATARSTASLPKHINTPSTSSVKGDPT  439
                SKLYFLYR CNAHR GIDGCCPLNK DLTSSENAAQ QCPSQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSEL ATARSTASLPKHINTPSTSSVKGDPT
Subject   7011  SKLYFLYRPCNAHRGGIDGCCPLNKVDLTSSENAAQVQCPSQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSELCATARSTASLPKHINTPSTSSVKGDPT  7421

Range 3: 7012 to 7422 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
310.8 bits(672) 0.0 132/137(96%) 0/137(0%) Minus/Minus
Query       30  Q*VILFVPSL*RPP*GN*WMLSPE*GRFDLLRKCSTSPMPKPTVNGVMVFAQFTGG*KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVVSNSEIHCLLTKAY*HPFNI*CKRRPH  440
                Q*VILFVPSL*RPP GN*WMLSPE*GRFD LRKCSTSPMPKPTVNGVMVFAQF G *KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVV NSEIHCLLTKAY*HPFNI*CKRRPH
Subject   7012  Q*VILFVPSL*RPPWGN*WMLSPE*GRFDFLRKCSTSPMPKPTVNGVMVFAQFAGC*KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVVRNSEIHCLLTKAY*HPFNI*CKRRPH  7422

Range 4: 7010 to 7420 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
291.6 bits(630) 0.0 132/137(96%) 0/137(0%) Plus/Plus
Query       28  VWGRLLH*MLKGC*YALVRRQWIXXXXXXXXXXYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQPPVNWAKTITPLTVGLGIGLVLHFLRRSNLPYSGDNIHQFPHGGRYRDGTKSITY  438
                +WGRLLH*MLKGC*YALVRRQWISLL TTLNSNYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQ P NWAKTITPLTVGLGIGLVLHFLR+SNLPYSGDNIHQFPHGGRYRDGTKSITY
Subject   7010  LWGRLLH*MLKGC*YALVRRQWISLLRTTLNSNYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQQPANWAKTITPLTVGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITY  7420

Range 5: 7148 to 7420 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.4 bits(418) 0.0 84/91(92%) 0/91(0%) Minus/Minus
Query      166  VSYTFCTVSVTPTVRELMDVVP*IRQI*PPQKMQHKPNAQANCQWSYGFCPIHRRLKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKE  438
                VSYTFCTV VTPTV ELMDVVP*IR I* PQKMQHK NAQANCQWSYGFCPI R LKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKE
Subject   7148  VSYTFCTVPVTPTVGELMDVVP*IR*I*LPQKMQHKSNAQANCQWSYGFCPIRRLLKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKE  7420

Range 6: 7013 to 7117 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
81.7 bits(172) 0.0 34/35(97%) 0/35(0%) Minus/Minus
Query       31  HKVI*IQSCEQQRDPLPPYQSILTPLQHLV*KATP  135
                HKVI*IQSC QQRDPLPPYQSILTPLQHLV*KATP
Subject   7013  HKVI*IQSCAQQRDPLPPYQSILTPLQHLV*KATP  7117

Range 7: 7155 to 7421 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
185.7 bits(399) 0.0 82/89(92%) 0/89(0%) Plus/Plus
Query      173  EIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFSRL*IGQKP*LH*QLAWALGLCCIF*GGQICLIQGTTSINSLTVGVTETVQKV*LT  439
                EIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFS L IGQKP*LH*QLAWAL LCCIF*G QI LIQGTTSINS TVGVT TVQKV*LT
Subject   7155  EIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFSSLRIGQKP*LH*QLAWALDLCCIF*GSQIYLIQGTTSINSPTVGVTGTVQKV*LT  7421

Range 8: 7011 to 7118 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
85.8 bits(181) 0.0 35/36(97%) 0/36(0%) Plus/Plus
Query       29  CGVAFYTRC*RGVNMLW*GGSGSRCCSQL*IQITL*  136
                CGVAFYTRC*RGVNMLW*GGSGSRCC+QL*IQITL*
Subject   7011  CGVAFYTRC*RGVNMLW*GGSGSRCCAQL*IQITL*  7118