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Nucleotide Sequence (584 letters)

Query ID:ds2016-56_47
Query definition:No definition line
Query length:468
Program:TBLASTX 2.2.29+
Database:/save/stheil/db/refseq_vir/viral.genomic.fna

Graphic Summary

Distribution of 1 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
59
118
177
236
295
354
413
472
531
584

Descriptions

Alignments

Fusarium graminearum dsRNA mycovirus-4 dsRNA1, complete genome

Sequence ID: Length: 2383 Number of Matches: 5

Range 1: 1779 to 2297 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
205.4 bits(442) 0.0 97/173(56%) 0/173(0%) Plus/Plus
Query       14  KMTGINWLGDKSFGTTILEDDDRIERQNTEEGCFKGVQYLGKFFRRHTVGEGGDAFDVVIPYRPIEETVARLYYPERVGGGATRTYLRALGNLLDNYGNPHAAKWLNGXXXXXXXXXXXXPVEWTSDTVQDAARDYTSELVVVPKPKRWSFEEWLALALAPKEEITDMYTIA*  532
                ++ G ++ GDKSF T  L D    E + TEEG F+G+QYLGKF R H +   G    V +PYRP EET   +YYPER   G  RTY RALGNLLDNYGNP  A WLN LLDWLE +++LLP +W  DTVQDAARDYTS+LV VP+P RW+FEEW+ L L+  +   + Y  A*
Subject   1779  RIFGQDYTGDKSFATYSLLDMWDEEEEFTEEGKFQGLQYLGKFLRGHKLDLDGRKITVALPYRPCEETFVHMYYPERKSEGVERTYQRALGNLLDNYGNPMMADWLNKLLDWLEPQMELLPTDWLEDTVQDAARDYTSDLVRVPRPLRWTFEEWVHLCLSSDDSDPEWYMYA*  2297

Range 2: 2060 to 2293 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.2 bits(149) 0.0 40/78(51%) 0/78(0%) Minus/Minus
Query      295  AMVYISVISSFGARASASHSSNDHRLGFGTTTNSLV*SLAASCTVSDVHSTGSKSNRDSNQSRSPFSHLAACGLP*LS  528
                A +Y S   S   +   +HSSN  R G GT T SLV*S AASCTVS   S G+ S   S+QS S FS  A  G P*LS
Subject   2060  AYIYHSGSESSDDKHKCTHSSNVQRNGRGTRTRSLV*SRAASCTVSSSQSVGNSSICGSSQSSSLFSQSAIIGFP*LS  2293

Range 3: 1871 to 2008 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.9 bits(72) 0.0 20/46(43%) 0/46(0%) Minus/Minus
Query      106  RSG*YRRATVSSMGR*GITTSNASPPSPTVWRRKNLPKY*TPLKHP  243
                RSG*Y    VSS GR G  T    P   ++  R+NLP+Y  P   P
Subject   1871  RSG*YICTKVSSHGRYGKATVIFRPSRSSL*PRRNLPRYCKPWNFP  2008

Range 4: 2058 to 2240 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.4 bits(95) 0.0 22/61(36%) 0/61(0%) Minus/Minus
Query      293  PFLKRPPFGLRNNYQLTGIVSGCVLHRVRCPFHW**VQSGLQPVKKSIQPLSSMRITVVIQ  475
                P LK P    R+ +Q+TG+V   +L+R+  P    *+   LQPV++ IQP+    I+V+++
Subject   2058  PLLKCPAQWARHTHQVTGVVPRRILYRILQPIGGQ*LHLWLQPVQQLIQPVRHHWISVIVE  2240

Range 5: 2047 to 2241 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.5 bits(93) 0.0 24/65(37%) 0/65(0%) Plus/Plus
Query      282  WEISWITTVIRMLLSG*MDFLTGWSPDWTYYQWNGHLTRCRTQPETIPVSW*LFRSPNGGRLRNG  476
                W I    T I+   +G*+   TGWS  W+Y    G   R R +  T PV+W + R+   G LR+G
Subject   2047  WAIYSTITEIQ*WRTG*ISCWTGWSHRWSYCPPIGWRIRYRMRRGTTPVTWCVCRAHCAGHLRSG  2241

Cryphonectria parasitica bipartite mycovirus 1 strain 09269 segment RNA1, complete sequence

Sequence ID: Length: 2026 Number of Matches: 2

Range 1: 1463 to 1888 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.5 bits(226) 0.0 54/142(38%) 0/142(0%) Plus/Plus
Query      104  EGCFKGVQYLGKFFRRHTVGEGGDAFDVVIPYRPIEETVARLYYPERVGGGATRTYLRALGNLLDNYGNPHAAKWLNGXXXXXXXXXXXXPVEWTSDTVQDAARDYTSELVVVPKPKRWSFEEWLALALAPKEEITDMYTIA  529
                +G F+G+Q+LGK+F       G  A    IPYRP  ET  RL YPE       +TYLRALGN LD  GN     WL   ++WL+ +L   P EW  +  +  +RDY++  V VP+P++  F++W  L +  +E    ++  A
Subject   1463  QGEFQGLQFLGKYFYLGDYPVGDGAMQQPIPYRPASETYLRLLYPEYGDLPTPQTYLRALGNYLDAAGNRAMEAWLTAFIEWLQPQLSYEPNEWPDNFKRMVSRDYSNVGVEVPRPRQIDFQQWRDLVVLGREAYRRLWRTA  1888

Range 2: 1409 to 1486 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.8 bits(50) 0.0 12/26(46%) 0/26(0%) Plus/Plus
Query       26  INWLGDKSFGTTILEDDDRIERQNTE  103
                I+W G KSF TT L D  + E Q  +
Subject   1409  IDWSGKKSFATTRLLDATQGEFQGLQ  1486

Curvularia thermal tolerance virus RNA1, complete sequence

Sequence ID: Length: 2149 Number of Matches: 4

Range 1: 1545 to 1952 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
121.6 bits(259) 0.0 57/136(42%) 0/136(0%) Plus/Plus
Query      113  FKGVQYLGKFFRRHTVGEGGDAFDVVIPYRPIEETVARLYYPERVGGGATRTYLRALGNLLDNYGNPHAAKWLNGXXXXXXXXXXXXPVEWTSDTVQDAARDYTSELVVVPKPKRWSFEEWLALALAPKEEITDMY  520
                F+GVQYLGK+FRR           V IPYRP +ET  RL YPE     A +T+LR LGN LD  GNP   KWL G +DWLE ++   P  W S+  +  +RDY+   + +P+P+R  +E+W  L + P+++   ++
Subject   1545  FQGVQYLGKYFRREEYPLDEGTVVVAIPYRPFKETYLRLLYPEYGSLEADQTWLRLLGNYLDAAGNPVTEKWLQGFMDWLEPQVVAPPQVWPSNFQRMVSRDYSGIGIEMPRPERMCYEQWRDLVVLPRDDYRQLW  1952

Range 2: 1473 to 1559 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.4 bits(60) 0.0 12/29(41%) 0/29(0%) Plus/Plus
Query       17  MTGINWLGDKSFGTTILEDDDRIERQNTE  103
                M GI+W G KSF TT + D   ++ Q  +
Subject   1473  MFGIDWSGKKSFATTAVLDATALQFQGVQ  1559

Range 3: 1550 to 1672 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.8 bits(74) 0.0 21/41(51%) 0/41(0%) Minus/Minus
Query      118  SG*YRRATVSSMGR*GITTSNASPPSPTVWRRKNLPKY*TP  240
                SG*  R  VS  GR*GI T+          RRK LP+Y*TP
Subject   1550  SG*SNRK*VSLNGR*GIATTTVPSSRGYSSRRKYLPRY*TP  1672

Range 4: 1736 to 1807 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.1 bits(55) 0.0 11/24(46%) 0/24(0%) Minus/Minus
Query      304  GSKSNRDSNQSRSPFSHLAACGLP  375
                G  +   SNQS +P SH +  GLP
Subject   1736  GGATTCGSNQSMNPCSHFSVTGLP  1807

Penicillium aurantiogriseum bipartite virus 1 segment RNA 1 putative RdRp gene, complete cds

Sequence ID: Length: 2110 Number of Matches: 5

Range 1: 1506 to 1730 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
86.8 bits(183) 0.0 38/75(51%) 0/75(0%) Plus/Plus
Query      113  FKGVQYLGKFFRRHTVGEGGDAFDVVIPYRPIEETVARLYYPERVGGGATRTYLRALGNLLDNYGNPHAAKWLNG  337
                F+GVQYLGK+FRR           VVIPYRP  ET  RL YPE       +T+LR LGN +D  GNP   +WL G
Subject   1506  FQGVQYLGKYFRREEYPTEDGPVGVVIPYRPFGETFLRLLYPEYGTLDVEQTWLRVLGNYIDAAGNPVTERWLQG  1730

Range 2: 1773 to 1898 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.8 bits(98) 0.0 17/42(40%) 0/42(0%) Plus/Plus
Query      380  EWTSDTVQDAARDYTSELVVVPKPKRWSFEEWLALALAPKEE  505
                +W S+ ++  +RDYT   V VP+P+R S+E+W  L + P+ E
Subject   1773  QWPSNFLRMVSRDYTGVGVEVPRPERMSYEQWRDLVVLPRSE  1898

Range 3: 1440 to 1520 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.5 bits(58) 0.0 11/27(41%) 0/27(0%) Plus/Plus
Query       23  GINWLGDKSFGTTILEDDDRIERQNTE  103
                GI+W G KSF TT + D   ++ Q  +
Subject   1440  GIDWFGKKSFATTAVVDVTPLQFQGVQ  1520

Range 4: 1697 to 1960 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.3 bits(97) 0.0 29/88(33%) 0/88(0%) Minus/Minus
Query      304  YAKGVKSPSTQAQAMVYISVISSFGARASASHSSNDHRLGFGTTTNSLV*SLAASCTVSDVHSTGSKSNRDSNQSRSPFSHLAACGLP  567
                Y  G  S  + + +     + S  G    + H S D R G GT+T + V*S        + H     S   SNQS SP+SH +  GLP
Subject   1697  YISGS*SAVSSSSSAFQADLYSDLGRTTRSRHCSYDIRSGRGTSTPTPV*SRDTIRRKLEGHWANVASTCGSNQSSSPWSHRSVTGLP  1960

Range 5: 1511 to 1633 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.9 bits(59) 0.0 18/41(44%) 0/41(0%) Minus/Minus
Query      118  SG*YRRATVSSMGR*GITTSNASPPSPTVWRRKNLPKY*TP  240
                SG  +R  VS  G *GITT           R K LP+Y TP
Subject   1511  SGYNKRKNVSPNGL*GITTPTGPSSVGYSSRLKYLPRYCTP  1633

Sclerotium hydrophilum virus 1 isolate ShR#20 putative RNA-dependent RNA polymerase gene, complete cds

Sequence ID: Length: 2121 Number of Matches: 2

Range 1: 1476 to 1703 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.0 bits(177) 0.0 38/76(50%) 0/76(0%) Plus/Plus
Query       23  GINWLGDKSFGTTILEDDDRIERQNTEEGCFKGVQYLGKFFRRHTVGEGGDAFDVVIPYRPIEETVARLYYPERVG  250
                GINW G KSF T+   D D       E G F+G+Q+LGK+F    V    +A   VIPYRPI ET+ RL YPER G
Subject   1476  GINWFGSKSFATSAAYDVDDGSALPKEGGPFEGLQFLGKYFCLREVEGDEEAIQAVIPYRPITETLDRLAYPERPG  1703

Range 2: 1743 to 1997 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.6 bits(102) 0.0 26/85(31%) 0/85(0%) Plus/Plus
Query      266  TYLRALGNLLDNYGNPHAAKWLNGXXXXXXXXXXXXPVEWTSDTVQDAARDYTSELVVVPKPKRWSFEEWLALALAPKEEITDMY  520
                +Y+RA+GN +D  GN     +L G L WLE +     + W  D +Q     Y          +R+++EEWL L L  K+ +  ++
Subject   1743  SYMRAVGNYMDGAGNKLTRVFLEGYLTWLEGKGHHEGIRWREDDLQKMTGIYDGVAETFLPARRYTYEEWLDLVLVEKKVVQRVF  1997