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Queries

Nucleotide Sequence (1496 letters)

Query ID:ds2016-57_54
Query definition:No definition line
Query length:328
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 3 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
150
300
450
600
750
900
1050
1200
1350
1496

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
728.0 728.0 33% 0 71% ALD89094

Alignments

RNA-dependent RNA polymerase [Macrophomina phaseolina single-stranded RNA virus 1]

Sequence ID: gb|ALD89094.1| Length: 1533 Number of Matches: 1

Range 1: 381 to 874 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
728.0 bits(1878) 0.0 351/497(71%) 6/497(1%) Minus/Plus
Query        6  EEYASIENELESTSRYFKSPKYDFPNLALDDVWYVVRDIFRHSRLTSFNYIIRMWEKKYALGAFMRDPLRPWRKYKRSAFIRNIGGYRPFKALWASTFRVASHVLPVSAVSVKGEALPEKKWASNLVRTVIGSPITQYIMSTVWNYGPNHTFAWESTPIKIGMPLNGYWMSSIWARHARCQLHIEGDFTAFDSTVSSGIMDLIKAVRKKGFESHKDRDRIANLIDVNYEQVEKQLLQTTSTGNVYLKXXXXXXXXXXXSMDNSLALVIIYLMAWKDVTALSAREFMYYNELSCFGDDHVLSCLASKPAVWTPKNIANVMKRWGLTNNLEVKPSLSSISFLSKWGTKATPNEVKHLLENGVDSRFIVWHDKKKLVGKLTAPITNKTPSYRLKRLLSYLTLTAHHQDVYDGLVKVICGSKSLMAQLRNDKLRIPSYRSVLRNWYSPSPPPQ---FHDEVNHDFDESTNDGRLIQYGEVSALDAIFGALSMVPDLLSPLL  1487
                EEYAS ENELE+TSRYF+SP+YD+P+L LDDVW++++DIF  SRLT FN+IIRMWEKKYALGAFMRDP R   KYKRS FI +IGGY PFK LWASTF  AS +LP SAVSVK EALPEKKWA+N VR++IGSPI+QYI+ST+WNYGPNH FAW STPIK+GMPLNGYWMS+IW RHARCQ+H+EGDF+ FDST+S  ++ +IKA+RKKGFE HKDR+RIA LID+NY+QV  QLL TTS+GNVYLKGTGLTTGHSSTSMDNS+ LV++YLMAWK +T LSAREF YYNELSCFGDDHVLS LA+KPA+WTPKNI  VM +WG+TNNLEVK  L  ++FLSK+G KA   E++ L   G+ ++FIVWHDK KLVGKLTAPITNK  SYR+KRLLSYL++TAHH DVYDG+VKV+  SKSLMA ++N+ ++IPSY  V+R+WYSPSP  +     DE+ H+F+   N G ++QYGEV+ALDAI GALS+ PDLLSP+L
Subject    381  EEYASFENELEATSRYFRSPRYDYPDLELDDVWFLLKDIFERSRLTPFNHIIRMWEKKYALGAFMRDPFRARSKYKRSRFIHDIGGYGPFKKLWASTFYWASQILPTSAVSVKNEALPEKKWAANKVRSIIGSPISQYILSTIWNYGPNHHFAWVSTPIKVGMPLNGYWMSTIWQRHARCQIHVEGDFSQFDSTISGEVVSMIKAIRKKGFEGHKDRERIAELIDINYDQVVHQLLNTTSSGNVYLKGTGLTTGHSSTSMDNSVGLVVLYLMAWKSLTGLSAREFKYYNELSCFGDDHVLSILATKPAIWTPKNIRGVMLKWGVTNNLEVKQRLDQVTFLSKFGRKANTTELRELGGMGIKAQFIVWHDKAKLVGKLTAPITNKAASYRVKRLLSYLSITAHHPDVYDGMVKVLVKSKSLMAHMKNNGIKIPSYTKVMRDWYSPSPESKNVTHLDEIAHEFE---NTGYIVQYGEVTALDAIVGALSVAPDLLSPIL  874

Nucleotide Sequence (638 letters)

Query ID:ds2016-57_54
Query definition:No definition line
Query length:328
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 3 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
64
128
192
256
320
384
448
512
576
638

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
240.7 240.7 31% 1.174e-68 61% ALD89094

Alignments

RNA-dependent RNA polymerase [Macrophomina phaseolina single-stranded RNA virus 1]

Sequence ID: gb|ALD89094.1| Length: 1533 Number of Matches: 1

Range 1: 928 to 1124 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
240.7 bits(613) 0.0 120/197(61%) 0/197(0%) Minus/Plus
Query       46  ITGLSGCNNTTLMVRHWLFCAYMSVRPKQRFGAWFNFAIARISSLQFFLNCKIMTQGRQNEXXXXXXXXXXXXXXXXLPDWLPSLGTFNFPDVQLLVDSIMHYFTVLIWSNVPPNFKETTPTLRTFGRFAGCLGVSAPTGSGKSTGFIQHLYLVAGHRFRKIVVVEPRTLLVHGLTNFMKSAYGLDCSGATTGLKLD  636
                + GLSG N TTL++RHWL+  YM  RP+Q+FGA  NF I RI++LQF LN +++ + RQ++LQ+D L+VA+LLSLI++PDW+   G    PDVQLLVDS++H+  V+IW  VPPNF+ETT TLRTF R  G +GV APTG+GKST F+QH+ +VAGHRFRKIVV++PR+LLVHGLT++M   YGL+ +GAT+GLKLD
Subject    928  VPGLSGVNETTLLIRHWLYLVYMRHRPRQKFGATLNFIIQRIANLQFALNGRVLLENRQHDLQIDCLIVAALLSLIAVPDWIAPAGKIILPDVQLLVDSVVHFIMVMIWQAVPPNFRETTSTLRTFDRKGGPVGVQAPTGTGKSTAFVQHVAMVAGHRFRKIVVIQPRSLLVHGLTSYMADFYGLEVTGATSGLKLD  1124

Nucleotide Sequence (901 letters)

Query ID:ds2016-57_54
Query definition:No definition line
Query length:328
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 3 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
91
182
273
364
455
546
637
728
819
901

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
149.4 149.4 31% 1.029e-35 34% ALD89094

Alignments

RNA-dependent RNA polymerase [Macrophomina phaseolina single-stranded RNA virus 1]

Sequence ID: gb|ALD89094.1| Length: 1533 Number of Matches: 1

Range 1: 20 to 293 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
149.4 bits(376) 0.0 96/279(34%) 10/279(4%) Plus/Plus
Query        1  VVMLILAWDGFGIWLFLFSLIVNGFSPFWFSVFIISGPISAVPLALFFSDSIKSEAELVRLVGEDRALWATVDGFSLFTHPAKRGFKELVWSGHDESGVWLETWARTLNLPQEIQQMVGQGAASLGSVMWSRMIIWLDTLVTD-----VPSGVFSILAFFLIFRKSIRAGYFWFQHFFLVWLTMFVLLYHVPPEKFFQGIVSVTWAFVRLIVQFQKGYVEPIDWLKWRLTSIVIRFTALAESVNSEFSKLHSINVSRGSTELINHLRVLSMRATIFIND  822
                V  L++ W GFG+ L L +        +   VF++ GP + + +   F DS+  E  L+  VG D ALW + +  +   HP K  FKE  W GHD SG WL +WA  L LP++++  +  G   LGS  WS  ++ L +L        V +GV  + A F ++R     G    +   +  LT F++L  +P E+    ++  T++ +R IV+F K   E  +W  WR  S+V++F A  ES+N EF K HS  ++RGS+ L  H +   MRA+I I+D
Subject     20  VFSLLIIWGGFGVTLGLLASASYFCGAWGILVFLVLGPFAGLWIIWVFKDSLTKEKILIDQVGADAALWTSFETHAASAHPLKMVFKEAYWRGHDLSGPWLVSWAEALGLPEDMKVNLEDGVVRLGSRAWSYCVLQLLSLSNSWASPLVGAGVAWLYARF-VWRT---CGRLSLRVLAIAELT-FLVLVCLPGEEILPLLIRCTYSVLRAIVRFTKRREEFWEWAHWRYVSLVVKFLAAVESLNEEFQKHHSKAIARGSSRLTQHFKTFVMRASIVISD  293