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Queries

Nucleotide Sequence (151 letters)

Query ID:ds2015-149_24
Query definition:No definition line
Query length:218
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 25 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
16
32
48
64
80
96
112
128
144
151

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
96.3 96.3 32% 1.613e-22 98% ABD79043

Alignments

triple gene block [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|ABD79043.1| Length: 221 Number of Matches: 1

Range 1: 1 to 48 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
96.3 bits(238) 0.0 47/48(98%) 0/48(0%) Minus/Plus
Query        1  MNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELVTEDESF  144
                MNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIREL+TEDESF
Subject      1  MNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESF  48

Nucleotide Sequence (147 letters)

Query ID:ds2015-149_24
Query definition:No definition line
Query length:218
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 25 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
15
30
45
60
75
90
105
120
135
147

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
107.8 107.8 33% 1.125e-27 98% ABC67234

Alignments

capsid protein, partial [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|ABC67234.1| Length: 147 Number of Matches: 1

See 2 more title(s)

Range 1: 73 to 120 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
107.8 bits(268) 0.0 47/48(98%) 0/48(0%) Plus/Plus
Query        3  LIGKSPFCDLNRSEIAGIIREVTTLHRFCMYYAKIVWNIHLETGIPPA  146
                LIGKSPFCDLNRSEIAGIIREVTTL RFCMYYAKIVWNIHLETGIPPA
Subject     73  LIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPA  120

Nucleotide Sequence (1021 letters)

Query ID:ds2015-149_24
Query definition:No definition line
Query length:218
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 25 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
103
206
309
412
515
618
721
824
927
1021

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
517.3 576.6 29% 7.539e-164 66% AQN80517

Alignments

replicase [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|AQN80517.1| Length: 2161 Number of Matches: 2

Range 1: 143 to 395 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
517.3 bits(1331) 0.0 249/253(98%) 0/253(0%) Plus/Plus
Query      117  DKSNHVVSKKGIGDSDSLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVGSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLKARSVVLSDGSRYAVDVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLLMPNIPKLAIPFF*R  875
                DKSNHV+SKKGIGDSDSLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVGSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLKARSVVLSDGSRYAVDVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLLMPNIPKL I FF R
Subject    143  DKSNHVISKKGIGDSDSLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVGSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLKARSVVLSDGSRYAVDVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLLMPNIPKLVISFFCR  395

Range 2: 363 to 406 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.3 bits(142) 0.0 29/44(66%) 0/44(0%) Minus/Plus
Query      870  LIGDFALVVRCGGRSGSLLLPNIPMVVFSFFCRMLENVLARISS  1001
                 I DFA +V   GRSGSLL+PNIP +V SFFCRM+ N LAR+SS
Subject    363  FIEDFASLVISCGRSGSLLMPNIPKLVISFFCRMMPNALARLSS  406

Nucleotide Sequence (229 letters)

Query ID:ds2015-149_24
Query definition:No definition line
Query length:218
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 25 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
23
46
69
92
115
138
161
184
207
229

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
80.9 80.9 17% 5.136e-17 100% BAF34851

Alignments

12.8 kDa hypothetical protein [Grapevine rupestris stem pitting-associated virus]

Sequence ID: dbj|BAF34851.1| Length: 117 Number of Matches: 1

Range 1: 1 to 38 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.9 bits(198) 0.0 38/38(100%) 0/38(0%) Plus/Plus
Query      116  MPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSG  229
                MPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSG
Subject      1  MPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSG  38

Nucleotide Sequence (178 letters)

Query ID:ds2015-149_24
Query definition:No definition line
Query length:218
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 25 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
18
36
54
72
90
108
126
144
162
178

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
122.5 122.5 33% 2.113e-32 98% BAF34850

Alignments

24.4 kDa hypothetical protein [Grapevine rupestris stem pitting-associated virus]

Sequence ID: dbj|BAF34850.1| Length: 221 Number of Matches: 1

Range 1: 152 to 210 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
122.5 bits(306) 0.0 58/59(98%) 0/59(0%) Minus/Plus
Query        1  LDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTPDDKHWFYIAA  177
                LDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPT DDKHWFYIAA
Subject    152  LDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAA  210

Nucleotide Sequence (1029 letters)

Query ID:ds2015-149_24
Query definition:No definition line
Query length:218
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 25 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
103
206
309
412
515
618
721
824
927
1029

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
702.2 702.2 33% 0 99% AQN80517

Alignments

replicase [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|AQN80517.1| Length: 2161 Number of Matches: 1

Range 1: 1091 to 1432 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
702.2 bits(1811) 0.0 340/342(99%) 0/342(0%) Plus/Plus
Query        2  DGLALKAGIRSFVESESPVDSALSSPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAG  1027
                DGLALKAGIRSFVESESPVD ALS PTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAG
Subject   1091  DGLALKAGIRSFVESESPVDPALSGPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAG  1432

Nucleotide Sequence (199 letters)

Query ID:ds2015-149_24
Query definition:No definition line
Query length:218
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 25 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
20
40
60
80
100
120
140
160
180
199

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
135.2 135.2 33% 3.595e-37 97% BAF34850

Alignments

24.4 kDa hypothetical protein [Grapevine rupestris stem pitting-associated virus]

Sequence ID: dbj|BAF34850.1| Length: 221 Number of Matches: 1

Range 1: 145 to 210 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
135.2 bits(339) 0.0 64/66(97%) 0/66(0%) Minus/Plus
Query        1  ITGSPFELDVEGVLICFGKEAVDLAAAHNSDFNLPCEVRGATFDVVTLLKSRDPTPDDKHWFYIAA  198
                ITGSPFELDVEGVLICFGKEAVDLAAAHNSDF LPCEVRGATFDVVTLLKSRDPT DDKHWFYIAA
Subject    145  ITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAA  210

Nucleotide Sequence (783 letters)

Query ID:ds2015-149_24
Query definition:No definition line
Query length:218
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 25 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
79
158
237
316
395
474
553
632
711
783

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
508.4 508.4 33% 3.94e-162 99% AQN80517

Alignments

replicase [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|AQN80517.1| Length: 2161 Number of Matches: 1

Range 1: 832 to 1091 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
508.4 bits(1308) 0.0 258/260(99%) 0/260(0%) Plus/Plus
Query        2  VEGNHCSLTIEPGEFFEMPRGMQSNFFHGVSNCLSGRVSLTFRRQKLEDDDQIFISPQVPIEQNHEKLDRNMWQMGLHGIKKSISINGTSFTSDLCSCFSCHNFHKFKDLINNXXXXXXXXXXXXCDRVVFATTGTGLSQVLAMPRSKKQSILVLEGALSLETDYGPKILGSFEVFKGDFSIKKIEDGSIFVISYRAPVRSTGKLRVHKSACSFSGSRELLLGCPIEASADFEIEDFNTFPVPGDGDCFWHSVGFLLSTD  781
                VEGNHCSLTIEPGEFFEMPRGMQSNFFHGVSNCLSGRVSLTFRRQKLEDDDQIFISPQVPIEQNHEKLDRNMWQMGLHGIKKSISINGTSFTSDLCSCFSCHNFHKFKDLINNLKLALGAQGLGKCDRVVFATTGTGLSQVLAMPRSKKQSILVLEGALSLETDYGPKILGSFEVFKGDFSIKKIEDGSIFVISYRAPVRSTGKLRVHKS CSFSGSRELLLGCPIEASADFEIEDFNTFPVPGDG+CFWHSVGFLLSTD
Subject    832  VEGNHCSLTIEPGEFFEMPRGMQSNFFHGVSNCLSGRVSLTFRRQKLEDDDQIFISPQVPIEQNHEKLDRNMWQMGLHGIKKSISINGTSFTSDLCSCFSCHNFHKFKDLINNLKLALGAQGLGKCDRVVFATTGTGLSQVLAMPRSKKQSILVLEGALSLETDYGPKILGSFEVFKGDFSIKKIEDGSIFVISYRAPVRSTGKLRVHKSTCSFSGSRELLLGCPIEASADFEIEDFNTFPVPGDGNCFWHSVGFLLSTD  1091

Nucleotide Sequence (145 letters)

Query ID:ds2015-149_24
Query definition:No definition line
Query length:218
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 25 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
15
30
45
60
75
90
105
120
135
145

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
98.2 98.2 33% 3.103e-23 90% BAF34875

Alignments

24.4 kDa hypothetical protein [Grapevine rupestris stem pitting-associated virus]

Sequence ID: dbj|BAF34875.1| Length: 221 Number of Matches: 1

Range 1: 166 to 213 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.2 bits(243) 0.0 43/48(90%) 0/48(0%) Plus/Plus
Query        2  VDLAAAHNSDFKLP*EVRGATFDVVTLLKSRDPTPDDKHWFYIAATRH  145
                VDLA AHNSDFKLP EVRG+TFDVVTLLKSRDPTP+DKHWFY+AATRH
Subject    166  VDLAVAHNSDFKLPCEVRGSTFDVVTLLKSRDPTPEDKHWFYVAATRH  213

Nucleotide Sequence (171 letters)

Query ID:ds2015-149_24
Query definition:No definition line
Query length:218
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 25 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
18
36
54
72
90
108
126
144
162
171

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
105.9 105.9 32% 4.399e-26 95% ABD79043

Alignments

triple gene block [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|ABD79043.1| Length: 221 Number of Matches: 1

Range 1: 1 to 55 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
105.9 bits(263) 0.0 52/55(95%) 0/55(0%) Minus/Plus
Query        1  MNNLVKVLSTFEFVGVYSVLRFPVVVHSVPGGGKSSLIRELVTEDESFIAFTAGV  165
                MNNLVK LSTFEFVGVYSVLRFPVVVHSVPG GKSSLIREL+TEDESFIAFTAGV
Subject      1  MNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGV  55

Nucleotide Sequence (120 letters)

Query ID:ds2015-149_24
Query definition:No definition line
Query length:218
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 25 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
12
24
36
48
60
72
84
96
108
120

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
83.2 83.2 32% 7.097e-18 100% AQN80518

Alignments

triple gene block protein 1 [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|AQN80518.1| Length: 221 Number of Matches: 1

Range 1: 145 to 183 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.2 bits(204) 0.0 39/39(100%) 0/39(0%) Plus/Plus
Query        2  ITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVR  118
                ITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVR
Subject    145  ITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVR  183

Nucleotide Sequence (250 letters)

Query ID:ds2015-149_24
Query definition:No definition line
Query length:218
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 25 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
25
50
75
100
125
150
175
200
225
250

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
92.8 92.8 18% 1.362e-20 95% AQN80518

Alignments

triple gene block protein 1 [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|AQN80518.1| Length: 221 Number of Matches: 1

Range 1: 178 to 221 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.8 bits(229) 0.0 42/44(95%) 0/44(0%) Plus/Plus
Query        1  LPCEVRGATFDVVTLLKSRDPTPDDKHWFYIAAARHRKKLIIMQ  132
                LPCEVRGATFDVVTLLKSRDPT DDKHWFYIAA RHRKKLIIMQ
Subject    178  LPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ  221

Nucleotide Sequence (133 letters)

Query ID:ds2015-149_24
Query definition:No definition line
Query length:218
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 25 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
14
28
42
56
70
84
98
112
126
133

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
91.3 91.3 33% 1.101e-20 100% BAF34850

Alignments

24.4 kDa hypothetical protein [Grapevine rupestris stem pitting-associated virus]

Sequence ID: dbj|BAF34850.1| Length: 221 Number of Matches: 1

Range 1: 25 to 68 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.3 bits(225) 0.0 44/44(100%) 0/44(0%) Minus/Plus
Query        1  VVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGRYIKP  132
                VVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGRYIKP
Subject     25  VVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGRYIKP  68

Nucleotide Sequence (1428 letters)

Query ID:ds2015-149_24
Query definition:No definition line
Query length:218
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 25 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
143
286
429
572
715
858
1001
1144
1287
1428

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
951.8 951.8 33% 0 100% AQN80517

Alignments

replicase [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|AQN80517.1| Length: 2161 Number of Matches: 1

Range 1: 1401 to 1875 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
951.8 bits(2459) 0.0 474/475(100%) 0/475(0%) Plus/Plus
Query        2  CKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAIFHNMHDFLLARSKGPLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQDDDXXXXXXXXXXXXXXWFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMLEAVREFEEKKASKSAATIENHSGRSCRDWLLDVALIFMKSQH  1426
                CKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAIFHNMHDFLLARSKGPLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQD+DCEVEELESECSNEEWFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMLEAVREFEEKKASKSAATIENHSGRSCRDWLLDVALIFMKSQH
Subject   1401  CKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAIFHNMHDFLLARSKGPLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQDEDCEVEELESECSNEEWFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMLEAVREFEEKKASKSAATIENHSGRSCRDWLLDVALIFMKSQH  1875

Nucleotide Sequence (106 letters)

Query ID:ds2015-149_24
Query definition:No definition line
Query length:218
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 25 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
106

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
75.1 75.1 33% 6.093e-15 89% AGV05452

Alignments

triple gene block protein TGB-1 [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|AGV05452.1| Length: 221 Number of Matches: 1

Range 1: 184 to 218 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.1 bits(183) 0.0 31/35(89%) 0/35(0%) Plus/Plus
Query        1  GASFDVVTLLKSRDPTPDDKHWFYIAATRHRKKLI  105
                G++F+VVTLLKSRDPTP+DKHWFYIAATRHRKKLI
Subject    184  GSTFNVVTLLKSRDPTPEDKHWFYIAATRHRKKLI  218

Nucleotide Sequence (117 letters)

Query ID:ds2015-149_24
Query definition:No definition line
Query length:218
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 25 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
12
24
36
48
60
72
84
96
108
117

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
59.3 59.3 25% 2.701e-09 100% AQN80518

Alignments

triple gene block protein 1 [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|AQN80518.1| Length: 221 Number of Matches: 1

Range 1: 1 to 29 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.3 bits(142) 0.0 29/29(100%) 0/29(0%) Minus/Plus
Query        2  MNNLVKALSTFEFVGVYSVLRFPVVVHSV  88
                MNNLVKALSTFEFVGVYSVLRFPVVVHSV
Subject      1  MNNLVKALSTFEFVGVYSVLRFPVVVHSV  29

Nucleotide Sequence (199 letters)

Query ID:ds2015-149_24
Query definition:No definition line
Query length:218
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 25 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
20
40
60
80
100
120
140
160
180
199

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
138.3 138.3 33% 2.887e-38 92% AQN80523

Alignments

triple gene block protein 1 [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|AQN80523.1| Length: 221 Number of Matches: 1

Range 1: 152 to 217 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
138.3 bits(347) 0.0 61/66(92%) 0/66(0%) Minus/Plus
Query        1  LDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTPDDKHWFYIAATRHRKKL  198
                LDVEGVLICFGKEAVDLA AHNSDFKLPCEVRG+TF+VVTLLKSRDPTP+D+HWFYIAATRHRKKL
Subject    152  LDVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHRKKL  217

Nucleotide Sequence (147 letters)

Query ID:ds2015-149_24
Query definition:No definition line
Query length:218
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 25 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
15
30
45
60
75
90
105
120
135
147

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
68.2 68.2 23% 2.816e-12 97% ABD79043

Alignments

triple gene block [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|ABD79043.1| Length: 221 Number of Matches: 1

Range 1: 1 to 34 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.2 bits(165) 0.0 33/34(97%) 0/34(0%) Minus/Plus
Query        3  MNNLVKALSTFEIVGVYSVLRFPVVVHSVPGSGK  104
                MNNLVKALSTFE VGVYSVLRFPVVVHSVPGSGK
Subject      1  MNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGK  34

Nucleotide Sequence (598 letters)

Query ID:ds2015-149_24
Query definition:No definition line
Query length:218
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 25 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
60
120
180
240
300
360
420
480
540
598

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
352.8 352.8 32% 6.989e-108 90% AQN80517

Alignments

replicase [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|AQN80517.1| Length: 2161 Number of Matches: 1

Range 1: 503 to 695 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
352.8 bits(904) 0.0 174/193(90%) 0/193(0%) Plus/Plus
Query        9  VPHAASSLIPLSSDPSFRPSSNEIDSALSEIKMASGVAGQSNLFRFLIDDIFLNELQNSYRSRLAKHLKALTKFFHFCGLQWFLLKQRVNLKFLKCGESSFVELSCGVAKLYKSVIQQALSPDASSGLAKVYVDHSSPQLCSDFHFMSDDELPNPALANDMTSGSSLSEDCQGFQTVEQAECAHPPNTPNTVI  587
                V HAASSLIPLSSDPSFRPSSNEID ALS IKMA GVAGQSNLFRFLIDDIFLNELQNSYRSRLAKHLKALTKFFHFCGLQWFLLKQRVNLKFLKCGE+SFVELSCGVAKLYKSVI Q LSPDASSGLAKVY+DHSSPQLCSDFHFMSDDELPN ALAND+ SGSSLSED QGFQTVEQAECAHP N    ++
Subject    503  VLHAASSLIPLSSDPSFRPSSNEIDFALSGIKMALGVAGQSNLFRFLIDDIFLNELQNSYRSRLAKHLKALTKFFHFCGLQWFLLKQRVNLKFLKCGETSFVELSCGVAKLYKSVILQVLSPDASSGLAKVYIDHSSPQLCSDFHFMSDDELPNSALANDVISGSSLSEDRQGFQTVEQAECAHPANDAPCIV  695

Nucleotide Sequence (327 letters)

Query ID:ds2015-149_24
Query definition:No definition line
Query length:218
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 25 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
33
66
99
132
165
198
231
264
297
327

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
154.5 154.5 23% 2.608e-43 100% BAF34849

Alignments

RNA-dependent RNA polymerase, partial [Grapevine rupestris stem pitting-associated virus]

Sequence ID: dbj|BAF34849.1| Length: 266 Number of Matches: 1

Range 1: 193 to 266 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
154.5 bits(389) 0.0 74/74(100%) 0/74(0%) Minus/Plus
Query      104  LIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID  325
                LIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID
Subject    193  LIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID  266

Nucleotide Sequence (1262 letters)

Query ID:ds2015-149_24
Query definition:No definition line
Query length:218
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 25 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
127
254
381
508
635
762
889
1016
1143
1262

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
508.8 508.8 20% 2.907e-177 100% AID16021

Alignments

coat protein [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|AID16021.1| Length: 259 Number of Matches: 1

Range 1: 1 to 250 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
508.8 bits(1309) 0.0 249/250(100%) 0/250(0%) Plus/Plus
Query      512  MASPPGRLPGESNEAFEARLKSLELARAQKQPEGSNQPPVLGGILAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGISEGDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEAKGGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALIN  1261
                MASPPGRLPGESNEAFEARLKSLELARAQKQPEGSNQPPVLGGILAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGISEGDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALE KGGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALIN
Subject      1  MASPPGRLPGESNEAFEARLKSLELARAQKQPEGSNQPPVLGGILAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGISEGDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALIN  250

Nucleotide Sequence (103 letters)

Query ID:ds2015-149_24
Query definition:No definition line
Query length:218
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 25 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
103

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
67.4 67.4 33% 2.77e-12 97% BAF34850

Alignments

24.4 kDa hypothetical protein [Grapevine rupestris stem pitting-associated virus]

Sequence ID: dbj|BAF34850.1| Length: 221 Number of Matches: 1

Range 1: 20 to 53 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.4 bits(163) 0.0 33/34(97%) 0/34(0%) Plus/Plus
Query        1  LRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTT  102
                LRFPVVVHSVPGSGKSSLIRELVTEDESFIAFT 
Subject     20  LRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTA  53

Nucleotide Sequence (181 letters)

Query ID:ds2015-149_24
Query definition:No definition line
Query length:218
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 25 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
19
38
57
76
95
114
133
152
171
181

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
112.1 112.1 31% 2.011e-28 98% ABD79043

Alignments

triple gene block [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|ABD79043.1| Length: 221 Number of Matches: 1

Range 1: 1 to 56 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.1 bits(279) 0.0 55/56(98%) 0/56(0%) Minus/Plus
Query        3  MNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVP  170
                MNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIREL+TEDESFIAFTAGVP
Subject      1  MNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGVP  56

Nucleotide Sequence (230 letters)

Query ID:ds2015-149_24
Query definition:No definition line
Query length:218
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 25 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
23
46
69
92
115
138
161
184
207
230

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
161.4 161.4 33% 3.446e-47 100% AQN80518

Alignments

triple gene block protein 1 [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|AQN80518.1| Length: 221 Number of Matches: 1

Range 1: 101 to 176 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
161.4 bits(407) 0.0 76/76(100%) 0/76(0%) Minus/Plus
Query        3  PYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDF  230
                PYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDF
Subject    101  PYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDF  176

Nucleotide Sequence (199 letters)

Query ID:ds2015-149_24
Query definition:No definition line
Query length:218
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 25 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
20
40
60
80
100
120
140
160
180
199

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
110.5 110.5 28% 1.281e-27 96% ABD79043

Alignments

triple gene block [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|ABD79043.1| Length: 221 Number of Matches: 1

Range 1: 1 to 56 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
110.5 bits(275) 0.0 54/56(96%) 0/56(0%) Plus/Plus
Query       30  MNNLVKALSTFEFVGVYSVLRFPAVVHSVPGSGKSSLIRELVTEDESFIAFTAGVP  197
                MNNLVKALSTFEFVGVYSVLRFP VVHSVPGSGKSSLIREL+TEDESFIAFTAGVP
Subject      1  MNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGVP  56