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Queries

Nucleotide Sequence (185 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 2 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
19
38
57
76
95
114
133
152
171
185

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
49.2 49.2 14% 4.468e-05 80% LT837585.1
46.9 46.9 12% 0.0002187 86% KT254133.1
46.4 46.4 10% 0.0003004 100% KY742649.1

Alignments

Bovine viral diarrhea virus 1 genome assembly, chromosome: viral_cRNA

Sequence ID: LT837585.1 Length: 12295 Number of Matches: 1

Range 1: 12149 to 12223 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.2 bits(101) 0.0 20/25(80%) 0/25(0%) Plus/Minus
Query        2  MIRRPPRSTLFPYTTLFRS*LCVGC  76
                MIRRPPRSTL PYTTLFRS +C  C
Subject  12149  MIRRPPRSTLGPYTTLFRSAVCNEC  12223

Pbunalikevirus phiFenriz, complete genome

Sequence ID: KT254133.1 Length: 65760 Number of Matches: 1

Range 1: 59282 to 59347 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.9 bits(96) 0.0 19/22(86%) 0/22(0%) Plus/Minus
Query        8  RRPPRSTLFPYTTLFRS*LCVG  73
                RRPPRSTLFPYTTLFRS L  G
Subject  59282  RRPPRSTLFPYTTLFRSGLLAG  59347

Proteus phage vB_PmiS TH, partial genome

Sequence ID: KY742649.1 Length: 55653 Number of Matches: 1

Range 1: 22914 to 22967 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.4 bits(95) 0.0 18/18(100%) 0/18(0%) Plus/Plus
Query        5  IRRPPRSTLFPYTTLFRS  58
                IRRPPRSTLFPYTTLFRS
Subject  22914  IRRPPRSTLFPYTTLFRS  22967

Nucleotide Sequence (192 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 2 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
20
40
60
80
100
120
140
160
180
192

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
46.0 69.9 16% 4.296e-05 55% LT837585.1
49.2 144.3 9% 5.281e-05 100% KY742649.1
46.0 91.9 9% 0.0004878 94% KT254133.1

Alignments

Bovine viral diarrhea virus 1 genome assembly, chromosome: viral_cRNA

Sequence ID: LT837585.1 Length: 12295 Number of Matches: 2

Range 1: 12164 to 12223 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.0 bits(94) 0.0 17/20(85%) 0/20(0%) Minus/Plus
Query        2  NRSEERRVGKECRSRWSPYH  61
                +RSEERRVG ECRSRWSP H
Subject  12164  SRSEERRVGTECRSRWSPDH  12223

Range 2: 1902 to 1934 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.0 bits(46) 0.0 6/11(55%) 0/11(0%) Minus/Plus
Query       68  PCLYTSKHTQH  100
                PC++T KH  H
Subject   1902  PCMFTQKHKNH  1934

Proteus phage vB_PmiS TH, partial genome

Sequence ID: KY742649.1 Length: 55653 Number of Matches: 3

Range 1: 22914 to 22967 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.2 bits(101) 0.0 18/18(100%) 0/18(0%) Minus/Minus
Query        5  RSEERRVGKECRSRWSPY  58
                RSEERRVGKECRSRWSPY
Subject  22914  RSEERRVGKECRSRWSPY  22967

Range 2: 22915 to 22968 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 18/18(100%) 0/18(0%) Plus/Plus
Query        6  YGDHRDLHSFPTRRSSDL  59
                YGDHRDLHSFPTRRSSDL
Subject  22915  YGDHRDLHSFPTRRSSDL  22968

Range 3: 22914 to 22967 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.4 bits(95) 0.0 18/18(100%) 0/18(0%) Plus/Plus
Query        5  IRRPPRSTLFPYTTLFRS  58
                IRRPPRSTLFPYTTLFRS
Subject  22914  IRRPPRSTLFPYTTLFRS  22967

Pbunalikevirus phiFenriz, complete genome

Sequence ID: KT254133.1 Length: 65760 Number of Matches: 2

Range 1: 59293 to 59346 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.0 bits(94) 0.0 17/18(94%) 0/18(0%) Plus/Minus
Query        9  GDHRDLHSFPTRRSSDLL  62
                GDHRDLHSFPTRRSSDL+
Subject  59293  GDHRDLHSFPTRRSSDLV  59346

Range 2: 59297 to 59347 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.0 bits(94) 0.0 17/17(100%) 0/17(0%) Minus/Plus
Query        8  RSEERRVGKECRSRWSP  58
                RSEERRVGKECRSRWSP
Subject  59297  RSEERRVGKECRSRWSP  59347