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Nucleotide Sequence (547 letters)

Query ID:ds2016-55_22
Query definition:No definition line
Query length:575
Program:TBLASTX 2.2.29+
Database:/save/stheil/db/refseq_vir/viral.genomic.fna

Graphic Summary

Distribution of 1 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
55
110
165
220
275
330
385
440
495
547

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
57.9 161.4 27% 2.685e-14 35% NC_033494

Alignments

Botryosphaeria dothidea virus 1 strain YZN115 segment RNA3 hypothetical protein gene, complete cds

Sequence ID: Length: 1967 Number of Matches: 4

Range 1: 802 to 1020 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.9 bits(120) 0.0 28/73(38%) 0/73(0%) Plus/Plus
Query      259  EWEGKPIATGMDPAMFDLATVGGRYDNDIGYTWDISHPDLDGVARFSSPFADHQVQVWHVFHFRARHLTKHTQ  477
                E  G PI     P  F LAT+ GRY  D+ YT   +   LD VA+ +     H VQ W  +H+RAR     +Q
Subject    802  ERHGTPIPDVTAPEDFALATIAGRYAGDVCYTAQTTCTALDLVAKLTFDSVGHGVQEWAAYHYRARRTPTPSQ  1020

Range 2: 619 to 705 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.5 bits(82) 0.0 13/29(45%) 0/29(0%) Plus/Plus
Query       76  WEYLKGLDTEQFDLIIALKCVGLILSSGP  162
                WEYL+  +   +DLI+A KC+GL+ +  P
Subject    619  WEYLENAEVASYDLILATKCMGLVYAVDP  705

Range 3: 801 to 998 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
39.6 bits(80) 0.0 23/66(35%) 0/66(0%) Minus/Minus
Query      258  RARK*KTCQTWT*WSAKGEEKRATPSRSGCEISQV*PMSLS*RPPTVARSNIAGSMPVAMGFPSHS  455
                RAR      +WT W  + +   AT SR+   +  V*  S +*RP  VAR+  +G++   +G P  S
Subject    801  RAR*W*AAHSWTPWPTESKVSLATRSRAVQVVCAV*HTSPA*RPAMVARAKSSGAVTSGIGVPWRS  998

Range 4: 618 to 686 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.5 bits(45) 0.0 11/23(48%) 0/23(0%) Minus/Minus
Query       75  SPTHLSAMMRSNCSVSRPLRYSH  143
                SP H  A MRS  + S   +YSH
Subject    618  SPMHFVARMRS*DATSAFSKYSH  686