Queries
Nucleotide Sequence (415 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
239.2 | 239.2 | 29% | 4.261e-69 | 97% | ANP22157 |
Alignments
methyl transferase/helicase [Grapevine leafroll-associated virus 1]
Sequence ID: gb|ANP22157.1| Length: 2204 Number of Matches: 1
Range 1: 220 to 341 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
239.2 bits(609) | 0.0 | 118/122(97%) | 0/122(0%) | Plus/Plus |
Query 50 LRDVQGQCFFTPKFCHKWLLTRDWSSGKRFVFCFVEGSVIAVPLEVIRYDMRVLWRRLPLGVYVALPHLLFRCEDTGELYYGDKYWCWXXXXXXXXXXXXXXSFESCISVRKLKRMLRFNVK 415 L DVQGQCFFTPKFCHKWLLTRDWSSGKRFVFCFVEG+V+AVPLEVIRYDMRVLWRRLP+GVYVALPHLLFRCEDTGELYYGDKYWCWLQLAVLNGNNLLAGSFESCISVRKLKRMLRFNVK Subject 220 LWDVQGQCFFTPKFCHKWLLTRDWSSGKRFVFCFVEGAVVAVPLEVIRYDMRVLWRRLPVGVYVALPHLLFRCEDTGELYYGDKYWCWLQLAVLNGNNLLAGSFESCISVRKLKRMLRFNVK 341
Nucleotide Sequence (525 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
348.2 | 348.2 | 32% | 1.382e-106 | 97% | YP_004940641 |
Alignments
MET/HEL gene product [Grapevine leafroll-associated virus 1]
Sequence ID: ref|YP_004940641.1| Length: 2204 Number of Matches: 1
Range 1: 548 to 717 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
348.2 bits(892) | 0.0 | 165/170(97%) | 0/170(0%) | Minus/Plus |
Query 16 VLKKEAAKNITYCQLDMRFCDHKAAVGFMVDVYDLDVFELAQALEKKDIKIFELCLMFPIELTARDGSLTIPELGVEVVRKGDVIMYTVGGVGDAYAHSVQKIISFFGSNVVQLPSGSAFSVEYVGYRLGYHQFSLCVIDTAHASYNLTRKVSTSFKGHSLVMIPEIADG 525 VLKKEAAKNITYCQ+D RFCDHKA VGFMVDVYDLDVFELAQALEKKDIKIFELCLMFPIELTARDGSLTIPELGVEVVRKGDVIMYTVGGVGDAY HSVQKIISFFGSNVVQLPSGSAFSVEYVGYRLGYHQFSLCVIDTAHASYNLTRKVST+FKGHSLVMIPEIADG Subject 548 VLKKEAAKNITYCQMDTRFCDHKAPVGFMVDVYDLDVFELAQALEKKDIKIFELCLMFPIELTARDGSLTIPELGVEVVRKGDVIMYTVGGVGDAYTHSVQKIISFFGSNVVQLPSGSAFSVEYVGYRLGYHQFSLCVIDTAHASYNLTRKVSTTFKGHSLVMIPEIADG 717
Nucleotide Sequence (435 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
191.8 | 191.8 | 25% | 2.014e-52 | 89% | ANP22138 |
Alignments
methyltransferase/helicase [Grapevine leafroll-associated virus 1]
Sequence ID: gb|ANP22138.1| Length: 2204 Number of Matches: 1
Range 1: 1148 to 1257 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
191.8 bits(486) | 0.0 | 98/110(89%) | 3/110(3%) | Minus/Plus |
Query 1 LAWAEFKDRVSGFVEEMGYIYGDSLNVQTACLTAAAYLSSSYEKSAILVLLAPKRFRYIGSVGYGIAALRCIKGGAYGRALKLMGVAACLALTAKKGVSRAA---ILTPK 321 +A AEFKDRVSG+VEEMGYIYGDSLNVQT CLTAAAYLSSSYEKSA LVLLAPKRFRYIGSVGYGIAALRCIKGG YGRA KLMGVAACLALTAKKGVSRAA I+ PK Subject 1148 IARAEFKDRVSGYVEEMGYIYGDSLNVQTVCLTAAAYLSSSYEKSAFLVLLAPKRFRYIGSVGYGIAALRCIKGGEYGRASKLMGVAACLALTAKKGVSRAASLQIVFPK 1257
Nucleotide Sequence (312 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
190.7 | 190.7 | 33% | 2.402e-55 | 89% | ANP22142 |
Alignments
p55 [Grapevine leafroll-associated virus 1]
Sequence ID: gb|ANP22142.1| Length: 482 Number of Matches: 1
Range 1: 83 to 185 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
190.7 bits(483) | 0.0 | 92/103(89%) | 0/103(0%) | Plus/Plus |
Query 2 MLRNWKTCATSGLLKLDTAIAKKKDKYFILTPEQRVAVRALPNSTNEAFAQLFLNLGVFLKRVPNDDDVSGKGNIPLVQVSSAIATDRIEEGRFSPLLAKFVR 310 M+RNWK A SG LKLDT I KKKDK+FILTPEQR AVRALPNSTNEAFAQLFLNLGVFLKRVPNDDDVSGKGNIPLVQVSSAIATDRIEEG++SPLLAKFVR Subject 83 MMRNWKAYANSGSLKLDTPITKKKDKHFILTPEQRAAVRALPNSTNEAFAQLFLNLGVFLKRVPNDDDVSGKGNIPLVQVSSAIATDRIEEGKYSPLLAKFVR 185
Nucleotide Sequence (327 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
204.1 | 204.1 | 33% | 2.243e-57 | 99% | ANP22138 |
Alignments
methyltransferase/helicase [Grapevine leafroll-associated virus 1]
Sequence ID: gb|ANP22138.1| Length: 2204 Number of Matches: 1
Range 1: 1516 to 1624 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
204.1 bits(518) | 0.0 | 108/109(99%) | 0/109(0%) | Minus/Plus |
Query 1 EVAFFSKCSRRYVYNGGSHASQGWNKAXXXXXXXXXXXESYDHCLIQKYKKGATIGFHADDEKCYTSGVSVVTVNLNGQARFRVRSNKTGEVVEHLLGDGDVFVMSPGM 327 EVAFFSKCSRRYVYNGGSHASQGWNKALDELREELKLDESYDHCLIQKY+KGATIGFHADDEKCYTSGVSVVTVNLNGQARFRVRSNKTGEVVEHLLGDGDVFVMSPGM Subject 1516 EVAFFSKCSRRYVYNGGSHASQGWNKALDELREELKLDESYDHCLIQKYRKGATIGFHADDEKCYTSGVSVVTVNLNGQARFRVRSNKTGEVVEHLLGDGDVFVMSPGM 1624
Nucleotide Sequence (317 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
180.3 | 180.3 | 29% | 3.957e-52 | 96% | ABM05860 |
Alignments
replicase, partial [Grapevine leafroll-associated virus 1]
Sequence ID: gb|ABM05860.1| Length: 381 Number of Matches: 1
Range 1: 44 to 135 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
180.3 bits(456) | 0.0 | 88/92(96%) | 0/92(0%) | Plus/Plus |
Query 40 HDAMNLRGCVRLAKRALVGEYMKSVKLSAVNSPPGGGKTTRLVDEYFGRKKRAKIATANTGSAADINSAIRAREGKKETDLVAKTANSWIVN 315 HDAMNLRGCV LAKRALVGEY KSVKLSAVNSPPGGGKTTRLVDEYFGRKKRAKIATANTGSAADINSAI+AREGKKE DLVAKTANSWIVN Subject 44 HDAMNLRGCVGLAKRALVGEYTKSVKLSAVNSPPGGGKTTRLVDEYFGRKKRAKIATANTGSAADINSAIQAREGKKEPDLVAKTANSWIVN 135