Nucleotide Sequence (390 letters)
Query ID: | ds2016-56_47 |
Query definition: | No definition line |
Query length: | 468 |
Program: | TBLASTX 2.2.29+ |
Database: | /save/stheil/db/refseq_vir/viral.genomic.fna |
Graphic Summary
Descriptions
Alignments
Range 1: 3986 to 4372 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
105.2 bits(228) | 0.0 | 46/129(36%) | 0/129(0%) | Minus/Plus |
Query 1 AEDLWAHSEDDFTQSLYLGNTVGRPHRDVDWDDETKKRSQPGKEIHVVTSRGTRESTEQELRAMLMDTLEAEAVYKPGNSPSFADFYKKRANWMIRGSMSGEKNVAKDDKAVWLAINSEGLGVRTNTTK 387 A+ + H+ DD Q LY+ N VGRPHR+ DWDDE KKR++ EI + + + E +L ++ L E + +F FY R NWMI+GS SGE+ + + K + + G+ +R TK Subject 3986 AKGEFQHTPDDLVQCLYIANMVGRPHRECDWDDEVKKRTRNVGEIKIARNGKMVPADESQLEEEILQMLLKEGSIRVKKPKTFEQFYSSRGNWMIKGSASGERMLISEYKEIVGQVKGLGVELRERATK 4372
Sclerotinia sclerotiorum botybirnavirus 1 segment 1, complete sequence
Range 1: 4228 to 4608 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
115.1 bits(250) | 0.0 | 49/127(39%) | 0/127(0%) | Minus/Plus |
Query 1 DLWAHSEDDFTQSLYLGNTVGRPHRDVDWDDETKKRSQPGKEIHVVTSRGTRESTEQELRAMLMDTLEAEAVYKPGNSPSFADFYKKRANWMIRGSMSGEKNVAKDDKAVWLAINSEGLGVRTNTTK 381 + W +SE DF Q LY+ VGRPHR+ DW+ E KRS K I T G + +E++ + M++D L +EA ++ F +Y+ RA WMI+GSMSGEK + + V + GL V + K Subject 4228 ETWLYSETDFPQCLYIAGFVGRPHREADWEAENAKRSAEPKPIRKFTKSGFVDMSEEDEKRMILDFLYSEATFRIKRVQGFERWYRSRAEWMIKGSMSGEKTILDTEPVVMAKLKDLGLKVDGHANK 4608
Range 2: 4221 to 4529 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
57.4 bits(119) | 0.0 | 42/103(41%) | 0/103(0%) | Plus/Minus |
Query 80 FSPDIDPRIIQLARFL*KSANEGLLPGL*TASASNVSISIALSSCSVDSRVPLLVTTCISLPGCDLFLVSSSQSTSR*GLPTVLPK*SDCVKSSSLCAHKSSA 388 FSPDIDP II AR + +N L L AS S I SS S+ S P LV I DL S+SQS S G PT C KS S +H S + Subject 4221 FSPDIDPLIIHSARLRYQRSNPCTLLILNVASEYRKSKIILFSSSSLMSTNPDLVNFRIGFGSADLLAFSASQSASLCGRPTNPAMYKHCGKSVSEYSHVSES 4529