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Nucleotide Sequence (468 letters)

Query ID:ds2016-121_19
Query definition:No definition line
Query length:287
Program:TBLASTX 2.2.29+
Database:/save/stheil/db/refseq_vir/viral.genomic.fna

Graphic Summary

Distribution of 1 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
47
94
141
188
235
282
329
376
423
468

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
153.0 609.1 28% 3.014e-61 42% NC_015494
50.0 171.8 25% 7.85e-26 41% NC_010343
51.9 173.6 22% 2.31e-26 47% NC_009519
50.5 169.5 22% 3.613e-25 41% NC_010346
48.7 164.5 22% 1.037e-23 50% NC_024014

Alignments

Fig cryptic virus segment 1, complete genome

Sequence ID: Length: 1696 Number of Matches: 9

Range 1: 278 to 589 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
153.0 bits(328) 0.0 66/104(63%) 0/104(0%) Minus/Plus
Query      152  GWARSFYTLEGHLESIALFNKPLIPEPIDETWTRVKALTHRKISTMFPPVTSLDFETDLDLVPFESSSAAGYGYLGKKGEGDNLNRAKKTANAAVRQFDEGIEN  463
                GWARSFYT+EG + SI  F+KPLI EP D  W  VK  T  KI ++FP V SL FE   D VPFESSS+AGYGY GKKGEG+N +RAK  ANAAVR+F E I+N
Subject    278  GWARSFYTVEGIMASIMQFSKPLIHEPTDPIWNDVKRETLMKIGSLFPQVQSLPFEGGFDHVPFESSSSAGYGYDGKKGEGNNFHRAKSIANAAVRKFSEDIDN  589

Range 2: 590 to 745 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
102.7 bits(218) 0.0 43/52(83%) 0/52(0%) Minus/Plus
Query        2  ENYDSAVSHIIENSTPDVAFTRTQLAKLPSIKVRIVFGEAFHYILIEGLSAA  157
                + YD AVSH+I+  TPD+AFTRTQLAKLPSIKVRIVFGEAFH ILIEGLSAA
Subject    590  QGYDYAVSHLIQQGTPDIAFTRTQLAKLPSIKVRIVFGEAFHNILIEGLSAA  745

Range 3: 277 to 486 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.6 bits(174) 0.0 40/70(57%) 0/70(0%) Plus/Minus
Query      255  AAELDSNGTRSKSVSKSSDVTGGNIVEIFLCVRALTLVHVSSIGSGMSGLLNNAIDSRCPSSV*NDRAHP  464
                A ELDSNGT SK  S  +D T GN + IF+ V  LT  H+ S+GS MSGLLN  ID+  PS+V* D AHP
Subject    277  ADELDSNGTWSKPPSNGND*TCGNKLPIFISVSLLTSFHIGSVGS*MSGLLNCIIDAIMPSTV*KDLAHP  486

Range 4: 595 to 744 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.7 bits(124) 0.0 33/50(66%) 0/50(0%) Plus/Minus
Query        3  AAESPSIRI**NASPKTILTLIEGSLAN*VLVKATSGVLFSMM*LTAES*  152
                AA+SPSI++ *NASPKTI TLI+GS A+ V VKA SGV   M  LTA S*
Subject    595  AADSPSIKML*NASPKTIRTLIDGSFASCVRVKAISGVPCCMRWLTA*S*  744

Range 5: 532 to 585 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
26.7 bits(52) 0.0 12/18(67%) 0/18(0%) Plus/Minus
Query      156  SIPSSNCRTAAFAVFLAR  209
                SI S N RTAAFA+  AR
Subject    532  SISSLNLRTAAFAMLFAR  585

Range 6: 596 to 721 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.7 bits(113) 0.0 21/42(50%) 0/42(0%) Plus/Minus
Query       26  NIMKCLAKDNPNFNRGKFS*LSSCKSNIWCAILDDVTHC*II  151
                N++KCL+KDNPNFNR    *L S +SNIW  +L ++  C ++
Subject    596  NVVKCLSKDNPNFNRW*LR*LCSRESNIWRTLLYEMADCVVV  721

Range 7: 332 to 487 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
39.1 bits(79) 0.0 22/52(42%) 0/52(0%) Plus/Minus
Query      254  GC*A*FEWH*V*ICLEV**CYRWEHR*DFPVC*SLNSCPCLINWFWNEWFVK  409
                G *A F+W  V    + **   WE       C SLN  P  I WF NEWF +
Subject    332  G**ARFKWDVVKTSFKW**LNLWEQTTYLH*CFSLNVVPYWIGWFMNEWFAE  487

Range 8: 280 to 477 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.2 bits(101) 0.0 29/66(44%) 0/66(0%) Minus/Plus
Query      264  MGTIILHTRRTPRINSVV*QTTHSRTN**DMDKS*GSNTQENLNDVPTGNITRLRDRFRPSAIRIK  461
                MG I+LH+RR   I   + QTTHS TN  +M++ *  NT E+   VPT +I  +  RF P  I I+
Subject    280  MG*ILLHSRRHYGIYYAIQQTTHS*TNRSNMERR*ERNTNEDR*FVPTSSIITI*RRF*PRPI*IE  477

Range 9: 637 to 714 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.4 bits(84) 0.0 16/26(62%) 0/26(0%) Minus/Plus
Query       33  RCCFYKNSIS*TSLD*S*DCLWRGIS  110
                R CF+ N+ S  ++D*S DCLWRGIS
Subject    637  RYCFHANTASEATID*SSDCLWRGIS  714

Raphanus sativus cryptic virus 2 segment 1, complete sequence

Sequence ID: Length: 1717 Number of Matches: 4

Range 1: 335 to 451 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.0 bits(103) 0.0 16/39(41%) 0/39(0%) Minus/Plus
Query      347  GWARSFYTLEGHLESIALFNKPLIPEPIDETWTRVKALT  463
                GWARS Y+L+ H+++I  + +  +PEP D+ W + K  T
Subject    335  GWARSVYSLDQHVDAILAYRRQKLPEPTDDVWNQTKQHT  451

Range 2: 506 to 625 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.6 bits(102) 0.0 20/40(50%) 0/40(0%) Minus/Plus
Query      167  DLVPFESSSAAGYGYLGKKGEGDNLNRAKKTANAAVRQFD  286
                D V + SSS+AGYGY+G KG+GDN  +A++TA     + D
Subject    506  DEVKWISSSSAGYGYVGHKGDGDNYLKARRTAVTIAEKLD  625

Range 3: 719 to 778 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.6 bits(78) 0.0 15/20(75%) 0/20(0%) Minus/Plus
Query        5  KVRIVFGEAFHYILIEGLSA  64
                KVR V+GEAFHY+L+EGL A
Subject    719  KVRNVWGEAFHYVLLEGLFA  778

Range 4: 653 to 706 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
33.6 bits(67) 0.0 13/18(72%) 0/18(0%) Minus/Plus
Query       74  IENSTPDVAFTRTQLAKL  127
                I  STPDVAFTRTQL+++
Subject    653  INQSTPDVAFTRTQLSQV  706

Fragaria chiloensis cryptic virus RNA 1, complete genome

Sequence ID: Length: 1734 Number of Matches: 4

Range 1: 339 to 434 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.9 bits(107) 0.0 15/32(47%) 0/32(0%) Minus/Plus
Query      368  GWARSFYTLEGHLESIALFNKPLIPEPIDETW  463
                GWARS+YTL+ H++SI  +++P +P+P +  W
Subject    339  GWARSYYTLQAHIDSIMQYDRPKLPQPTNAAW  434

Range 2: 507 to 605 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 20/33(61%) 0/33(0%) Minus/Plus
Query      191  LDLVPFESSSAAGYGYLGKKGEGDNLNRAKKTA  289
                LD V +  SSAAGYGY+G+K + DN  RA+KTA
Subject    507  LDQVKWVRSSAAGYGYVGRKSDNDNYFRARKTA  605

Range 3: 723 to 782 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.1 bits(77) 0.0 14/20(70%) 0/20(0%) Minus/Plus
Query        5  KVRIVFGEAFHYILIEGLSA  64
                K+R V+GEAFHY+L+EGL A
Subject    723  KIRNVWGEAFHYVLLEGLFA  782

Range 4: 657 to 710 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.9 bits(70) 0.0 12/18(67%) 0/18(0%) Minus/Plus
Query       74  IENSTPDVAFTRTQLAKL  127
                +E+STPD+AFTRTQL ++
Subject    657  LEDSTPDIAFTRTQLCQI  710

Rose cryptic virus 1 RNA 1, complete sequence

Sequence ID: Length: 1749 Number of Matches: 4

Range 1: 507 to 605 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.5 bits(104) 0.0 21/33(64%) 0/33(0%) Minus/Plus
Query      191  LDLVPFESSSAAGYGYLGKKGEGDNLNRAKKTA  289
                LD V +  SSAAGYGY G+K +GDN  RA+KTA
Subject    507  LDQVKWVRSSAAGYGYTGRKSDGDNYIRARKTA  605

Range 2: 339 to 434 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.5 bits(93) 0.0 13/32(41%) 0/32(0%) Minus/Plus
Query      368  GWARSFYTLEGHLESIALFNKPLIPEPIDETW  463
                GWARS+YTL+ H++S+  +++P +  P +  W
Subject    339  GWARSYYTLQAHVDSLMQYDRPKLQPPTNTAW  434

Range 3: 723 to 782 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.1 bits(77) 0.0 14/20(70%) 0/20(0%) Minus/Plus
Query        5  KVRIVFGEAFHYILIEGLSA  64
                K+R V+GEAFHY+L+EGL A
Subject    723  KIRNVWGEAFHYVLLEGLFA  782

Range 4: 657 to 710 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.4 bits(71) 0.0 13/18(72%) 0/18(0%) Minus/Plus
Query       74  IENSTPDVAFTRTQLAKL  127
                +E+STPDVAFTRTQL ++
Subject    657  LEDSTPDVAFTRTQLCQI  710

Arhar cryptic virus-I segment RNA-1, strain Hyderabad

Sequence ID: Length: 1714 Number of Matches: 4

Range 1: 335 to 430 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 16/32(50%) 0/32(0%) Minus/Plus
Query      368  GWARSFYTLEGHLESIALFNKPLIPEPIDETW  463
                GWARS+YTLE HL +I  +++P + +P D  W
Subject    335  GWARSYYTLETHLNAIMNYDRPKLSQPSDAAW  430

Range 2: 503 to 601 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.3 bits(84) 0.0 18/33(55%) 0/33(0%) Minus/Plus
Query      191  LDLVPFESSSAAGYGYLGKKGEGDNLNRAKKTA  289
                LD V +  SSAAGYGY+G K +  N  RA+ TA
Subject    503  LDKVKWVRSSAAGYGYVGLKSDPGNYERARTTA  601

Range 3: 719 to 778 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.6 bits(78) 0.0 15/20(75%) 0/20(0%) Minus/Plus
Query        5  KVRIVFGEAFHYILIEGLSA  64
                KVR V+GEAFHY+L+EGL A
Subject    719  KVRNVWGEAFHYVLLEGLFA  778

Range 4: 653 to 706 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.9 bits(72) 0.0 13/18(72%) 0/18(0%) Minus/Plus
Query       74  IENSTPDVAFTRTQLAKL  127
                ++NSTPDVAFTRTQL ++
Subject    653  LKNSTPDVAFTRTQLCQI  706