Nucleotide Sequence (426 letters)
Query ID: | ds2016-57_12 |
Query definition: | No definition line |
Query length: | 638 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
158.2 | 307.1 | 42% | 5.137e-37 | 39% | KX380787.1 | |
157.3 | 249.3 | 37% | 9.696e-37 | 51% | GQ140627.1 | |
157.3 | 249.3 | 37% | 9.696e-37 | 51% | NC_013470.1 | |
161.4 | 543.9 | 42% | 5.561e-38 | 31% | KJ742567.1 | |
177.9 | 353.4 | 40% | 6.019e-43 | 38% | HE579625.1 |
Alignments
Fusarium graminearum dsRNA mycovirus 5 isolate HN1 segment RNA1, complete sequence
Sequence ID: KX380787.1 Length: 2030 Number of Matches: 4
Range 1: 1582 to 1944 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
158.2 bits(339) | 0.0 | 73/121(60%) | 0/121(0%) | Plus/Plus |
Query 5 GDAFDVVIPYRPIEETVARLYYPERVGGGATRTYLRALGNLLDNYGNPHAAKWLNGXXXXXXXXXXXXPVEWTSDTVQDAARDYTSELVVVPKPKRWSFEEWLALTLTPKEEITDMYTIA* 367 G V +PYRP EET +YYPER G RTY RALGNLLDNYGNP A WLN LLDWLE +++LLP +W DTVQDAAR+YTS+LV VP+P RW+FEEW+ L L+P + + Y A* Subject 1582 GRKITVALPYRPCEETFVHMYYPERKSEGVERTYQRALGNLLDNYGNPLMAAWLNKLLDWLEPQMELLPTDWLEDTVQDAARNYTSDLVRVPRPLRWTFEEWVHLCLSPDDSDPEWYMYA* 1944
Range 2: 1707 to 1940 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
71.6 bits(150) | 0.0 | 40/78(51%) | 0/78(0%) | Minus/Minus |
Query 130 AMVYISVISSFGVRVSASHSSNDHRLGFGTTTNSLV*SLAASCTVSDVHSTGSKSNRDSNQSRSPFSHLAACGLP*LS 363 A +Y S S G + +HSSN HR G GT T SLV* AAS TVS S G+ S SNQS + F+H A G P*LS Subject 1707 AYIYHSGSESSGDKHRCTHSSNVHRKGRGTLTRSLV*FRAAS*TVSSSQSVGNSSICGSNQSNNLFNHAAIRGFP*LS 1940
Range 3: 1596 to 1655 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
25.4 bits(49) | 0.0 | 13/20(65%) | 0/20(0%) | Minus/Minus |
Query 19 RSG*YRRATVSSMGR*GITT 78 RSG*Y VSS GR*G T Subject 1596 RSG*YMWTKVSSHGR*GSAT 1655
Range 4: 1705 to 1887 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.9 bits(107) | 0.0 | 24/61(39%) | 0/61(0%) | Minus/Minus |
Query 128 PFLKRPSFGLRNNYQLTGIVSGCVLHRVRCPFHW**VQSGLQPVKKSIQPLSSMRITVVIQ 310 P LKRPS R +Q+TG+V +L+RV P + LQPV++ IQP RI+++++ Subject 1705 PLLKRPSQRARYPHQITGVVPRRILNRVLQPISGQQLHLWLQPVQQFIQPCRHQRISIIVE 1887
Fusarium graminearum dsRNA mycovirus 4 segment dsRNA1, complete sequence
Sequence ID: GQ140627.1 Length: 2383 Number of Matches: 3
Range 1: 1935 to 2297 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
157.3 bits(337) | 0.0 | 73/121(60%) | 0/121(0%) | Plus/Plus |
Query 5 GDAFDVVIPYRPIEETVARLYYPERVGGGATRTYLRALGNLLDNYGNPHAAKWLNGXXXXXXXXXXXXPVEWTSDTVQDAARDYTSELVVVPKPKRWSFEEWLALTLTPKEEITDMYTIA* 367 G V +PYRP EET +YYPER G RTY RALGNLLDNYGNP A WLN LLDWLE +++LLP +W DTVQDAARDYTS+LV VP+P RW+FEEW+ L L+ + + Y A* Subject 1935 GRKITVALPYRPCEETFVHMYYPERKSEGVERTYQRALGNLLDNYGNPMMADWLNKLLDWLEPQMELLPTDWLEDTVQDAARDYTSDLVRVPRPLRWTFEEWVHLCLSSDDSDPEWYMYA* 2297
Range 2: 2060 to 2293 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
70.3 bits(147) | 0.0 | 40/78(51%) | 0/78(0%) | Minus/Minus |
Query 130 AMVYISVISSFGVRVSASHSSNDHRLGFGTTTNSLV*SLAASCTVSDVHSTGSKSNRDSNQSRSPFSHLAACGLP*LS 363 A +Y S S + +HSSN R G GT T SLV*S AASCTVS S G+ S S+QS S FS A G P*LS Subject 2060 AYIYHSGSESSDDKHKCTHSSNVQRNGRGTRTRSLV*SRAASCTVSSSQSVGNSSICGSSQSSSLFSQSAIIGFP*LS 2293
Fusarium graminearum dsRNA mycovirus 4 dsRNA1, complete genome
Sequence ID: NC_013470.1 Length: 2383 Number of Matches: 3
Range 1: 1935 to 2297 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
157.3 bits(337) | 0.0 | 73/121(60%) | 0/121(0%) | Plus/Plus |
Query 5 GDAFDVVIPYRPIEETVARLYYPERVGGGATRTYLRALGNLLDNYGNPHAAKWLNGXXXXXXXXXXXXPVEWTSDTVQDAARDYTSELVVVPKPKRWSFEEWLALTLTPKEEITDMYTIA* 367 G V +PYRP EET +YYPER G RTY RALGNLLDNYGNP A WLN LLDWLE +++LLP +W DTVQDAARDYTS+LV VP+P RW+FEEW+ L L+ + + Y A* Subject 1935 GRKITVALPYRPCEETFVHMYYPERKSEGVERTYQRALGNLLDNYGNPMMADWLNKLLDWLEPQMELLPTDWLEDTVQDAARDYTSDLVRVPRPLRWTFEEWVHLCLSSDDSDPEWYMYA* 2297
Range 2: 2060 to 2293 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
70.3 bits(147) | 0.0 | 40/78(51%) | 0/78(0%) | Minus/Minus |
Query 130 AMVYISVISSFGVRVSASHSSNDHRLGFGTTTNSLV*SLAASCTVSDVHSTGSKSNRDSNQSRSPFSHLAACGLP*LS 363 A +Y S S + +HSSN R G GT T SLV*S AASCTVS S G+ S S+QS S FS A G P*LS Subject 2060 AYIYHSGSESSDDKHKCTHSSNVQRNGRGTRTRSLV*SRAASCTVSSSQSVGNSSICGSSQSSSLFSQSAIIGFP*LS 2293
Gremmeniella abietina RNA virus 6 strain GaRV6_1 RNA dependent RNA polymerase gene, complete cds
Sequence ID: KJ742567.1 Length: 2165 Number of Matches: 9
Range 1: 1682 to 2032 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
161.4 bits(346) | 0.0 | 73/117(62%) | 0/117(0%) | Plus/Plus |
Query 17 DVVIPYRPIEETVARLYYPERVGGGATRTYLRALGNLLDNYGNPHAAKWLNGXXXXXXXXXXXXPVEWTSDTVQDAARDYTSELVVVPKPKRWSFEEWLALTLTPKEEITDMYTIA* 367 + V+PYRP+EETVAR+ YPER Y R LGNLLD YGNP A+WLN LLDWLE +L +P WTSD+VQDAARDYT+ V VPKPKRWS+EEWL LTL+ K + DMY + * Subject 1682 EAVVPYRPMEETVARVLYPEREARDVLHLYERVLGNLLDGYGNPLTARWLNELLDWLEPKLAFMPTTWTSDSVQDAARDYTAVEVEVPKPKRWSWEEWLVLTLSEKRDAQDMYIVC* 2032
Range 2: 1795 to 2022 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
92.7 bits(196) | 0.0 | 43/76(57%) | 0/76(0%) | Minus/Minus |
Query 130 VYISVISSFGVRVSASHSSNDHRLGFGTTTNSLV*SLAASCTVSDVHSTGSKSNRDSNQSRSPFSHLAACGLP*LS 357 +YIS S F RV+ +HSS+DHR GFGT+T++ V*S AASCT+S VH G ++ SNQS S FS A GLP* S Subject 1795 IYISCASRFSERVNTNHSSHDHRFGFGTSTSTAV*SRAASCTLSLVHVVGINASLGSNQSSSSFSQRAVKGLP*PS 2022
Range 3: 1681 to 1746 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
29.0 bits(57) | 0.0 | 14/22(64%) | 0/22(0%) | Minus/Minus |
Query 16 TRSG*YRRATVSSMGR*GITTS 81 +RSG RATVSS+GR G T S Subject 1681 SRSGYNTRATVSSIGRYGTTAS 1746
Range 4: 1711 to 2031 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
63.8 bits(133) | 0.0 | 41/107(38%) | 0/107(0%) | Plus/Plus |
Query 46 GNGSSPVLSRTCGWGSHSDLPTSFGKSLG*LR*SACC*VAEWTS*LVGVPIGLTTSGMDI*HGAGRSQRLYQ*VGSCSEAQTMVV*GMAGAHPNSERGDYRYVHHSL 366 G+G + V+SRT G + + G+S G LR* C +AE + LVG G+ MD * A RS LY G +E + +V+ GM G +P E G RYV+ L Subject 1711 GDGRTCVISRTRS*GCAAPV*KGAGQSAGRLR*PLNCTLAERAAGLVGAQAGVYADHMDQ*QRARRSPGLYGGGGGGAETKAVVMGGMVGVNPL*EAGRARYVYSLL 2031
Range 5: 1782 to 1922 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.3 bits(99) | 0.0 | 20/47(43%) | 0/47(0%) | Plus/Plus |
Query 117 WEISWITTVIRMLLSG*MDFLTGWSPDWTYYQWNGHLTRCRTQPETI 257 W I W TV L +G* GWSP W + +G +T C+TQP I Subject 1782 WAICWTVTVTP*LHAG*TSCWIGWSPSWRLCRPHGPVTACKTQPGII 1922
Range 6: 1944 to 2018 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
25.4 bits(49) | 0.0 | 11/25(44%) | 0/25(0%) | Plus/Plus |
Query 279 RSPNDGRLRNGWRSP*LRKRRLQIC 353 R+ + G RNGW P LR +IC Subject 1944 RNQSGGHGRNGWC*PSLRSGTRKIC 2018
Range 7: 1682 to 1864 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
39.1 bits(79) | 0.0 | 19/61(31%) | 0/61(0%) | Minus/Minus |
Query 17 QSGLQPVKKSIQPLSSMRITVVIQEIXXXXXXXXXXXPTHTFWIIQASYRFLNGPIGNYHI 199 Q GLQP+++ +QP S +TV +Q+I+Q + P+ +FWI R L+ + ++ + Subject 1682 QLGLQPIQQLVQPACS*GVTVTVQQIAQHPFIQVQHIPSFSFWI*HTCDRLLHWTVRDHSL 1864
Range 8: 1883 to 2020 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
34.1 bits(68) | 0.0 | 17/46(37%) | 0/46(0%) | Minus/Minus |
Query 218 VHICNLLFRS*GERQPFLKRPSFGLRNNYQLTGIVSGCVLHRVRCP 355 +HI + G QPFL P R+ + I+ GCVLH V P Subject 1883 IHILRVPLLREG*HQPFLP*PPLWFRHLHLHRRIIPGCVLHAVTGP 2020
Range 9: 1782 to 2018 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
50.1 bits(103) | 0.0 | 29/79(37%) | 0/79(0%) | Minus/Minus |
Query 117 TYL*SPLSELG*APAIPQTTIVWASEQLPTHWYSLWLRPAPCQMSIPLVVSPIGTPTSQEVHSAT*QHADYRSYPRDFP 353 TYL P S+ G P IP T S P Y+ LR A C S+ +P PT+ SA+ Q YR+ P D P Subject 1782 TYLARPASQRGLTPTIPPMTTALVSAPPPPPPYNPGLRLARCHWSMWSA*TPAWAPTNPAARSASVQLRGYRNRPADCP 2018
Uncultured dsRNA virus genomic RNA containing putative RdRp, contig 507Hv1_454_3
Sequence ID: HE579625.1 Length: 639 Number of Matches: 4
Range 1: 299 to 622 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
177.9 bits(382) | 0.0 | 79/108(73%) | 0/108(0%) | Plus/Plus |
Query 2 GGDAFDVVIPYRPIEETVARLYYPERVGGGATRTYLRALGNLLDNYGNPHAAKWLNGXXXXXXXXXXXXPVEWTSDTVQDAARDYTSELVVVPKPKRWSFEEWLALTL 325 G +V+IPYRP+ ETVAR+YYPER RTYLRALGNLLDNYGNP AA+WLN LLDWLE+R+D LP+EW+ DTVQDAARDYTSE V+VPKP+RW++EEWLALTL Subject 299 GDSTEEVIIPYRPVAETVARMYYPERAANQPYRTYLRALGNLLDNYGNPIAARWLNDLLDWLEARVDTLPLEWSDDTVQDAARDYTSERVLVPKPRRWTYEEWLALTL 622
Range 2: 427 to 618 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
91.3 bits(193) | 0.0 | 45/64(70%) | 0/64(0%) | Minus/Minus |
Query 130 VSASHSSNDHRLGFGTTTNSLV*SLAASCTVSDVHSTGSKSNRDSNQSRSPFSHLAACGLP*LS 321 V A+HSS H LGFGT+T SLV*SLAASCTVS HS+GS S R SNQS SH AA GLP*LS Subject 427 VRANHSS*VHLLGFGTSTLSLV*SLAASCTVSSDHSSGSVSTRASNQSNRSLSHRAAIGLP*LS 618
Range 3: 298 to 372 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
33.6 bits(67) | 0.0 | 16/25(64%) | 0/25(0%) | Minus/Minus |
Query 1 SG*YRRATVSSMGR*GITTSNASPP 75 SG*Y ATVS+ GR*GI TS+ P Subject 298 SG*YILATVSATGR*GIITSSVESP 372
Range 4: 425 to 616 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
50.6 bits(104) | 0.0 | 24/64(38%) | 0/64(0%) | Minus/Minus |
Query 128 ERQPFLKRPSFGLRNNYQLTGIVSGCVLHRVRCPFHW**VQSGLQPVKKSIQPLSSMRITVVIQ 319 E QP L P LR+ + L ++ C+LHR+ P V S LQP+++ I+P I V+IQ Subject 425 ESQPLLVGPPPRLRHQHPLASVIPRCILHRIIRPLQRQCVNSRLQPIQQIIKPSCRNWIAVIIQ 616