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Queries

Nucleotide Sequence (815 letters)

Query ID:ds2016-57_12
Query definition:No definition line
Query length:638
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 3 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
82
164
246
328
410
492
574
656
738
815

Descriptions

Alignments

Alternaria alternata partitivirus 1 isolate Avi1 segment RNA1, complete sequence

Sequence ID: KY352402.1 Length: 1833 Number of Matches: 11

Range 1: 818 to 1630 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
562.4 bits(1221) 0.0 247/271(91%) 0/271(0%) Minus/Plus
Query        1  FGVEVKVMEMRYCIPLVKRFSDMFGKTPYPVGRNMTKALPFIIDNLLDDKKFGLVTDISKLDTSVGPDWIDWAFSQLKSFFDMGMTASSETRNSHVFDFLHYYFKRTPILLPSGQLIKKAGGVPSGSGFXXXXXXXXXXXXXVYSRLRMGHKKPDIIKMFVVGDDMATSVDHDFSIEEFSHYMSQLGFEINPSKVMFSDKGIELKFLGYSKRGGGLYRPIEELLQTAFFPEKYVGNPNRSRQRNLGQSIAAGLSNSFFDKCNYWMEELVTL  813
                +  EVKV+EMRYCIPL+KRFS+MFGKTPYPVGRNMTKALPFIID+LL DKKFGLVTDISKLDTSVGPDWIDWAFSQLKSFFD G T SSE R+S+VFDFLH+YFKRTPILLPSGQL+KKAGGVPSGSGFTQLVDTLVTTLATVYSRLRMGH K  I KMFVVGDDMATSVDHDFSIEEFSH M QLGFEINPSKVMFS+KGIELKFLGYSKRGGGLYRPIEELLQTAFFPEKYVGNPNRSRQR LGQSIAAGLSNSFFDKCNYWMEELVTL
Subject    818  YPAEVKVIEMRYCIPLMKRFSEMFGKTPYPVGRNMTKALPFIIDHLLQDKKFGLVTDISKLDTSVGPDWIDWAFSQLKSFFDFGFTLSSERRDSNVFDFLHFYFKRTPILLPSGQLVKKAGGVPSGSGFTQLVDTLVTTLATVYSRLRMGHTKDQIFKMFVVGDDMATSVDHDFSIEEFSHIMGQLGFEINPSKVMFSNKGIELKFLGYSKRGGGLYRPIEELLQTAFFPEKYVGNPNRSRQRILGQSIAAGLSNSFFDKCNYWMEELVTL  1630

Range 2: 826 to 1422 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
333.3 bits(721) 0.0 155/199(78%) 0/199(0%) Plus/Minus
Query      209  MPLSENMTLEGLISKPSWLI**ENSSIEKSWSTDVAISSPTTNILIMSGFLCPIRKRE*TVANVVTRVSTSWVKPEPEGTPPAFLIN*PEGKRIGVRLK***RKSKTCELRVSEEAVMPMSKNDLSCEKAQSIQSGPTDVSSLLISVTRPNFLSSSRLSIMKGSALVILRPTG*GVLPNMSEKRLTKGMQ*RISMTLTS  805
                MPL ENMTLEG ISKPSW +  ENSSIEKSWSTDVAISSPTTNIL +  F+ PI +RE*TVANVVTRVSTSWVKPEP+GTPPAFL + PEGKRIGVRLK* *RKSKT   R S+E+V P SK DLS EKAQSIQSGPT+VSS  +SVTRPNFLS  R S++KG A VILRPTG*GVLPN+SEKR   GMQ*RISMTLTS
Subject    826  MPLLENMTLEGFISKPSWPMMWENSSIEKSWSTDVAISSPTTNILNIWSFV*PILRRE*TVANVVTRVSTSWVKPEPDGTPPAFLTSWPEGKRIGVRLK*K*RKSKTLLSRRSDESVKPKSKKDLS*EKAQSIQSGPTEVSSFEMSVTRPNFLSCKRWSMIKGRAFVILRPTG*GVLPNISEKRFINGMQ*RISMTLTS  1422

Range 3: 1489 to 1626 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
97.3 bits(206) 0.0 41/46(89%) 0/46(0%) Plus/Minus
Query        5  VTSSSIQ*LHLSKNELDRPAAMDCPKLR*RERFGFPTYFSGKKAVW  142
                VTSSSIQ*LHLSKNEL+ PAAMD P +R*RERFGFPTYFSGKKAVW
Subject   1489  VTSSSIQ*LHLSKNELESPAAMD*PSIR*RERFGFPTYFSGKKAVW  1626

Range 4: 827 to 1630 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
357.1 bits(773) 0.0 163/268(61%) 0/268(0%) Plus/Minus
Query        1  ECDKLFHPIVALVEE*VG*TSGDGLSQIALT*TVWVSDILFRKESSLEKFFDGTVKSTTPFGVAEELEFYALVREHDFGRVNFKTELAHIMRKLLD*EIVVDGCCHIVANYKHLNNVGLLVSHT*A*VNRSQCRDKSVNELGKAGTGRNATRLLDQLTRR*ENRCTFEVVMKKVENM*IASLRRSCHAHVEERLELRESPVDPIWTN*CIKLTDIGDKTEFLIIK*VVNNER*CLSHIATYRVRGLAKHVGKAFN*RYAVTHFHDFDF  804
                E +KLFHPIV  VEE*+G    +GL+Q +LT*T+WVS+ILFRKESSLE+F D  +K+TT FGV E+LEFYALVREHDFGRV FKTELAH + KLLD EIVVD C HIVAN KHL  +   V+H+   VN SQC +KSVNELGK GTGR+AT LLDQL RR*ENRC F+V +KKVE++ I    R C   VEE LELRESP+ PI T+  I+  ++ ++ + LI++ +V+++R  L HI T RVR  AKH+ +AF+*  AVTH +DFDF
Subject    827  EGNKLFHPIVTFVEE*IGEPCSNGLTQYSLT*TIWVSNILFRKESSLEEFLDWAIKATTTFGVTEKLEFYALVREHDFGRVYFKTELAHDVGKLLDREIVVDRCGHIVANNKHLEYLVFCVTHSKTRVNSSQCCNKSVNELGKTGTGRDATSLLDQLARR*ENRCAFKVEVKKVEDIAITPF*RKCETEVEEGLELRESPIYPIRTDRGIEF*NVSNEAKLLILQEMVDDKRQSLCHITTDRVRCFAKHLREAFH*WNAVTHLNDFDF  1630

Range 5: 1095 to 1622 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
244.8 bits(528) 0.0 117/176(66%) 0/176(0%) Minus/Plus
Query        9  IHMFSTFFITTSNVHLFSYLLVN*SRRRVAFLPVPALPNSLTLLSRHWLRFTHAYVWDTRSPTLLRCL*LATIWQHPSTTISQSRSFLII*ASSVLKLTLPKSCSLTRA*NSSSSATPNGVVDFTVPSKNFSRLLSFLKSMSETQTVHVNAIWDNPSPLVYPTHSSTSATIGWKSL  536
                I M STFF +T N HLFSYL  N SRR VA  PVP LPNSLTLL +HWL FT    W T+     RCL LATIW H STTIS SRSF    ASSVLK TLPKSCSLTRA*NSS S TPN VV F   S+N S+LLSFLKSM ETQ VHVN  W NP     P HSST+ TIGWKSL
Subject   1095  IAMSSTFFTSTLNAHLFSYLRANWSRRLVASRPVPVLPNSLTLLLQHWLLFTLVLEWVTQKTKYSRCLLLATIWPHLSTTISLSRSFPTSWASSVLK*TLPKSCSLTRA*NSSFSVTPNVVVAFIAQSRNSSKLLSFLKSMLETQIVHVNEYWVNPLLQGSPIHSSTNVTIGWKSL  1622

Range 6: 829 to 945 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.8 bits(111) 0.0 22/39(56%) 0/39(0%) Minus/Plus
Query      686  SQSHGNALLHTFS*TLFRHVWQDPLPCRSQYD*GTTFHY  802
                SQSH +ALLH+ + TL   VWQ+ LPCRS YD G+ F++
Subject    829  SQSH*DALLHSINETLL*DVWQNTLPCRS*YDKGSAFYH  945

Range 7: 1003 to 1062 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
32.2 bits(64) 0.0 14/20(70%) 0/20(0%) Minus/Plus
Query      569  YISWSRLDRLGFLAAQVVLR  628
                Y+  S LDRLGFL+AQV+LR
Subject   1003  YLCRS*LDRLGFLSAQVLLR  1062

Range 8: 1152 to 1625 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
224.2 bits(483) 0.0 105/158(66%) 0/158(0%) Plus/Minus
Query        6  *QALPSNSCTCRRMSWIDQRRWIVPNCVDVNGLGFRHTFQERKQSGEVLRWDGKVHHPVWSSRGT*VLCPCQRT*LWKG*FQNRAGSYNEKTPRLRNRGRRMLPYRRQLQTS**CRASCVPYVSVSKP*PMS*QECQRVG*SRNRKERHPPS*SIDQK  479
                *QALPSNS  CRRM+W   ++WI P  VDVN LGF+HTFQERKQ G V R   K HH VWS+R T*VLCPC RT*LWKG FQNRAG    KTPR RNRGR+M PYRRQ QTS*     C P+   SK *PM *QECQRVG*+RNR  RH PS* +  K
Subject   1152  *QALPSNSYICRRMNWRALQQWIDPVFVDVNDLGFQHTFQERKQFGGVPRLGDKGHHHVWSNRET*VLCPC*RT*LWKGLFQNRAGP*CGKTPR*RNRGRQMWPYRRQQQTS*IFGLLCDPF*DESKQ*PML*QECQRVG*NRNRTGRHQPS*PVGPK  1625

Range 9: 828 to 1061 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
66.6 bits(139) 0.0 39/78(50%) 0/78(0%) Plus/Minus
Query      570  RRTT*AARKPSRSNLDQLMYQAY*YR*QDRISYHQVGCQ**KVVP*SYCDLQGKGSCQTCRKSV*LKVCSNAFP*L*L  803
                RR T*A RKP+ SN D+  Y+    +*+ + SY     +**K  P SY D QGK  CQT ++SV L  CSNA  *L*L
Subject    828  RRRT*AERKPNLSNQDRQRYRVLKCQ*RGQTSYPARDGR**KAEPLSYYDRQGKVFCQTSQRSVSLMECSNASQ*L*L  1061

Range 10: 1153 to 1626 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
238.0 bits(513) 0.0 103/158(65%) 0/158(0%) Minus/Plus
Query        5  FWSIDQEGGWRSFRFRLYPTR*HSCHDIGYGLLTLTYGTQEARHY*DVCSWRRYGNIRRPRFLNRGVFSLYEPARF*N*PFQSHVL*QGHRTQVPRLLQTGWWTLPSHRRTSPDCFLS*KVCRKPKPFTSTQFGTIHRRWSIQLILRQVQLLDGRACH  478
                F    QEG WR  RFR YPTR*HSC++IGY LL+   G+ +  +  DVC WRRYG+I RPRFL RGVF  + PARF*N PFQSHVL*QGHRTQV RLLQT WW L  +R T P+CFLS*KVC KPK FTST  G+IH   ++Q ILRQ+ LLDGRAC+
Subject   1153  FGPTGQEGWWRPVRFRFYPTR*HSCYNIGYCLLSS*NGSHKRPNIQDVCCWRRYGHICRPRFLYRGVFPHHGPARF*NKPFQSHVL*QGHRTQVSRLLQTWWWPLSPNRGTPPNCFLS*KVCWKPKSFTSTNTGSIHCCRALQFILRQM*LLDGRACY  1626

Range 11: 828 to 971 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.5 bits(82) 0.0 25/48(52%) 0/48(0%) Minus/Plus
Query      660  KSKSWKCVTAYL*LNAFPTCLARPLTL*VAI*LRHYLSLLTTYLMIRN  803
                KSKS +CVTA+ * NA   CLA+ LTL V I* R  L   T    IR+
Subject    828  KSKSLRCVTAFH**NASLRCLAKHLTLSVVI*QRLCLLSSTISCRIRS  971

Botryosphaeria dothidea partitivirus 1 isolate LW 1 segment RNA 1 putative RNA dependent RNA polymerase (RdRp) gene, complete cds

Sequence ID: KF688740.1 Length: 1823 Number of Matches: 9

Range 1: 818 to 1288 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
269.1 bits(581) 0.0 119/157(76%) 0/157(0%) Minus/Plus
Query      343  FGVEVKVMEMRYCIPLVKRFSDMFGKTPYPVGRNMTKALPFIIDNLLDDKKFGLVTDISKLDTSVGPDWIDWAFSQLKSFFDMGMTASSETRNSHVFDFLHYYFKRTPILLPSGQLIKKAGGVPSGSGFXXXXXXXXXXXXXVYSRLRMGHKKPDII  813
                +  EVKV+EMRY IPL++RF   FGK PYPVG N+TKALPFIID+LL+D K G VTD+SKLDTSVGPDWIDWAFS LK F+ MGMT SSETRNSHVFDFLHYYFKRTPIL PSGQL++K+GGVPSGSGFTQ+VDTL T L T YS LRMG+++ DII
Subject    818  YPAEVKVIEMRYVIPLLERFKSQFGKIPYPVGVNLTKALPFIIDHLLNDGKHGFVTDVSKLDTSVGPDWIDWAFSFLKDFYYMGMTESSETRNSHVFDFLHYYFKRTPILFPSGQLVRKSGGVPSGSGFTQIVDTLCTLLMTTYSMLRMGYQEDDII  1288

Range 2: 1292 to 1624 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
201.3 bits(433) 0.0 80/111(72%) 0/111(0%) Minus/Plus
Query       10  KMFVVGDDMATSVDHDFSIEEFSHYMSQLGFEINPSKVMFSDKGIELKFLGYSKRGGGLYRPIEELLQTAFFPEKYVGNPNRSRQRNLGQSIAAGLSNSFFDKCNYWMEEL  342
                K+F VGDDMATSV   F +E+FS Y+ QLGFEIN  KVMFS++GIELKFLGYSK GG ++RPI+ELLQTA+FPEKYVGNP RSRQR LGQ++A+GL+N F  K NYWMEEL
Subject   1292  KIFAVGDDMATSVPSSFDVEQFSFYVGQLGFEINVDKVMFSNRGIELKFLGYSKYGGNIWRPIDELLQTAYFPEKYVGNPERSRQRILGQTLASGLTNGFLSKVNYWMEEL  1624

Range 3: 826 to 1287 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
185.3 bits(398) 0.0 95/154(62%) 0/154(0%) Plus/Minus
Query      344  IMSGFLCPIRKRE*TVANVVTRVSTSWVKPEPEGTPPAFLIN*PEGKRIGVRLK***RKSKTCELRVSEEAVMPMSKNDLSCEKAQSIQSGPTDVSSLLISVTRPNFLSSSRLSIMKGSALVILRPTG*GVLPNMSEKRLTKGMQ*RISMTLTS  805
                IMS    PI   E* V   V  VST WVKP+PEGTPP F  + PEGKRIGVRLK** +KSKT ELRVS ++VMPM    L  E AQSIQSGPTDVS+   SVT+P F S ++ S+MKG ALV L PTG G+ PN   KR  +GM *RIS+TLTS
Subject    826  IMSSSW*PILSIE*VVIKSVQSVSTIWVKPDPEGTPPDFRTSCPEGKRIGVRLK**CKKSKTWELRVSLDSVMPM**KSLRKENAQSIQSGPTDVSNFDTSVTKPCFPSFNK*SMMKGRALVRLTPTGYGIFPN*DLKRSRRGMT*RISITLTS  1287

Range 4: 1495 to 1623 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.4 bits(108) 0.0 26/43(60%) 0/43(0%) Plus/Minus
Query       11  SSSIQ*LHLSKNELDRPAAMDCPKLR*RERFGFPTYFSGKKAV  139
                SSSIQ*L L +    RP A   P +R RER G PTYFSGK AV
Subject   1495  SSSIQ*LTLERKPFVRPEARV*PSIRCRERSGLPTYFSGKYAV  1623

Range 5: 1294 to 1425 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.4 bits(95) 0.0 24/44(55%) 0/44(0%) Plus/Minus
Query      209  MPLSENMTLEGLISKPSWLI**ENSSIEKSWSTDVAISSPTTNI  340
                +P  EN+TL  LISKPS   * EN S  K   T+VA+SSPT  I
Subject   1294  IPRFENITLSTLISKPSCPT*KENCSTSKLEGTEVAMSSPTAKI  1425

Range 6: 827 to 1288 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
122.0 bits(260) 0.0 67/154(44%) 0/154(0%) Plus/Minus
Query      343  NNVGLLVSHT*A*VNRSQCRDKSVNELGKAGTGRNATRLLDQLTRR*ENRCTFEVVMKKVENM*IASLRRSCHAHVEERLELRESPVDPIWTN*CIKLTDIGDKTEFLIIK*VVNNER*CLSHIATYRVRGLAKHVGKAFN*RYAVTHFHDFDF  804
                +NV LLV+H+   V R Q   K ++ LG+  +G + +RL ++L+RR ENR   EVV+++VE++ IA L   CHAHV E L+  E PVDP+ TN  + L  IGDKT   II+ V+++ER  L  I + RVR L +   +AF     VTH ++ DF
Subject    827  DNVILLVTHSKHRVGRHQECTKRIDYLGETRSGGDTSRLPNELSRREENRSALEVVVQEVEDVGIARLA*FCHAHVVEVLKKGERPVDPVRTNGRV*LRHIGDKTVLSIIQQVIDDERESLGKIDSDRVRNLPELRFEAFEEGNDVTHLNNLDF  1288

Range 7: 829 to 1287 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.5 bits(165) 0.0 57/153(37%) 0/153(0%) Minus/Plus
Query      344  SQSHGNALLHTFS*TLFRHVWQDPLPCRSQYD*GTTFHY*QPT***EIRSCHRYQ*A*YISWSRLDRLGFLAAQVVLRHGHDSFF*DSQFTCFRXXXXXXXXXXXXXTFWSIDQEGGWRSFRFRLYPTR*HSCHDIGYGLLTLTYGTQEARHY  802
                SQ + +AL H+   TL   + +D +PCRSQ   G+ FH+     * + R CHR     ++ WS LDRLG L +  +L HGHD    D+QF   RL +LLLQ ++YSL FW+   E G    R   +P   ++ + +   LL    G     HY
Subject    829  SQGY*DALRHSPPRTLQISIREDSVPCRSQSYQGSPFHHRSLVE*WKARFCHRCVEVRHVRWS*LDRLGVLLS*GLLLHGHDRIKRDAQFPRLRLLALLLQAHSYSLPFWTTRSEVGRCPLRIWFHPDSRYALYTLDDDLLYA*NGLPRG*HY  1287

Range 8: 1293 to 1628 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.1 bits(114) 0.0 40/112(36%) 0/112(0%) Minus/Plus
Query        6  RCL*LATIWQHPSTTISQSRSFLII*ASSVLKLTLPKSCSLTRA*NSSSSATPNGVVDFTVPSKNFSRLLSFLKSMSETQTVHVNAIWDNPSPLVYPTHSSTSATIGWKSLS  341
                + L LAT W  PS   S   S    * +S  K  L + CS T   +S+S AT N VV   V   +  +  + L+SM  T+    N     P P V  T SS   TIGW+S +
Subject   1293  KSLLLATTWLPPSLLASMLSSSPFT*DNSASKSMLIR*CSQTAVLSSNSWATQNTVVISGVLLTSCFKQRTSLRSMLATRNALDNVYSVKPWPQV*QTASSPKLTIGWRSFA  1628

Range 9: 927 to 1109 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.4 bits(108) 0.0 27/61(44%) 0/61(0%) Plus/Minus
Query      522  RKHVNCESQKKLSCPCRRTT*AARKPSRSNLDQLMYQAY*YR*QDRISYHQVGCQ**KVVP  704
                R+  NC S+  LSCPC R+ *  R PSRS+ DQ       +R*Q+R  +H    +**K  P
Subject    927  RRRGNCASRLILSCPCSRSP*ERRTPSRSSQDQRTCLTSTHR*QNRAFHHSTSDR**KGEP  1109

Grapevine partitivirus isolate 3138 03 561 RNA dependent RNA polymerase (RdRp) gene, complete cds

Sequence ID: JX658570.1 Length: 1775 Number of Matches: 2

Range 1: 1219 to 1530 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.7 bits(113) 0.0 30/104(29%) 0/104(0%) Minus/Plus
Query       40  DIIKMFVVGDDMATSVDHDFSIEEFSHYMSQLGFEINPSKVMFSDKGIELKFLGYSKRGGGLYRPIEELLQTAFFPEKYVGNPNRSRQRNLGQSIAAGLSNSFF  351
                +I  + V+GDD A     +F +          G  + P K   +   +E K LG + RGG  +RP EE  + A +PE  V + + S  R +G  I   + +  F
Subject   1219  EIRNLKVLGDDSAFRTGSEFDLARAQEDADVTGMVLKPEKCEKTTDPVEFKLLGTTYRGGRPHRPTEEWFKLALYPEGGVSSLDVSLTRLVGLWIGGAMHDLHF  1530

Range 2: 1048 to 1152 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.3 bits(97) 0.0 18/35(51%) 0/35(0%) Minus/Plus
Query      427  HVFDFLHYYFKRTPILLPSGQLIKKAGGVPSGSGF  531
                +V+D + +YF  TPIL+P G++ +K  GVPSGS F
Subject   1048  NVWDSMVWYFINTPILMPDGRMFRKYRGVPSGSWF  1152

Xinzhou partiti like virus 1 strain XZSJSC65291 segment Seg 1 RdRp gene, complete cds

Sequence ID: KX884238.1 Length: 1523 Number of Matches: 3

Range 1: 752 to 892 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 20/47(43%) 0/47(0%) Minus/Plus
Query      592  PYPVGRNMTKALPFIIDNLLDDKKFGLVTDISKLDTSVGPDWIDWAF  732
                P  +G++M K LP+ ++ LL D  F    DIS  D+SV   +IDW F
Subject    752  PIYIGKDMFKELPYTLNRLLRDNFFAYCIDISAFDSSVNQIFIDWFF  892

Range 2: 1112 to 1366 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.5 bits(82) 0.0 22/85(26%) 0/85(0%) Minus/Plus
Query       94  IIKMFVVGDDMATSVDHDFSIEEFSHYMSQLGFEINPSKVMFSDKGIELKFLGYSKRGGGLYRPIEELLQTAFFPEKYVGNPNRS  348
                ++  +V+GDD      +   +E F     + GF++N  K + S    E+ FLG++  G  L R    L   A   E  + N +++
Subject   1112  VVPTYVLGDDSIFCHHNPNHLESFRVLFEEFGFKLNVRKTIVSKSSQEIVFLGHNFYGSRLTRDDFTLACLAIHTETPIVNSSQT  1366

Range 3: 947 to 1042 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.0 bits(70) 0.0 12/32(38%) 0/32(0%) Minus/Plus
Query      427  DFLHYYFKRTPILLPSGQLIKKAGGVPSGSGF  522
                D+  +  K TP+++P G++     G+PSGS F
Subject    947  DYCRFELKHTPVVMPDGKMYICHTGIPSGSYF  1042

Xinzhou partiti like virus 1 strain XZSJSC65291 segment Seg 1 RdRp gene, complete cds

Sequence ID: NC_032131.1 Length: 1523 Number of Matches: 3

Range 1: 752 to 892 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 20/47(43%) 0/47(0%) Minus/Plus
Query      592  PYPVGRNMTKALPFIIDNLLDDKKFGLVTDISKLDTSVGPDWIDWAF  732
                P  +G++M K LP+ ++ LL D  F    DIS  D+SV   +IDW F
Subject    752  PIYIGKDMFKELPYTLNRLLRDNFFAYCIDISAFDSSVNQIFIDWFF  892

Range 2: 1112 to 1366 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.5 bits(82) 0.0 22/85(26%) 0/85(0%) Minus/Plus
Query       94  IIKMFVVGDDMATSVDHDFSIEEFSHYMSQLGFEINPSKVMFSDKGIELKFLGYSKRGGGLYRPIEELLQTAFFPEKYVGNPNRS  348
                ++  +V+GDD      +   +E F     + GF++N  K + S    E+ FLG++  G  L R    L   A   E  + N +++
Subject   1112  VVPTYVLGDDSIFCHHNPNHLESFRVLFEEFGFKLNVRKTIVSKSSQEIVFLGHNFYGSRLTRDDFTLACLAIHTETPIVNSSQT  1366

Range 3: 947 to 1042 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.0 bits(70) 0.0 12/32(38%) 0/32(0%) Minus/Plus
Query      427  DFLHYYFKRTPILLPSGQLIKKAGGVPSGSGF  522
                D+  +  K TP+++P G++     G+PSGS F
Subject    947  DYCRFELKHTPVVMPDGKMYICHTGIPSGSYF  1042

Nucleotide Sequence (365 letters)

Query ID:ds2016-57_12
Query definition:No definition line
Query length:638
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 3 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
37
74
111
148
185
222
259
296
333
365

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
89.5 232.8 22% 4.27e-30 52% KY352403.1
49.2 49.2 10% 0.0002755 46% KF688741.1

Alignments

Alternaria alternata partitivirus 1 isolate Avi1 segment RNA2, complete sequence

Sequence ID: KY352403.1 Length: 1680 Number of Matches: 4

Range 1: 969 to 1175 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
89.5 bits(189) 0.0 36/69(52%) 0/69(0%) Plus/Plus
Query      157  SKSDYLEINGKWYNVGLPNSELKKLPGYKLEGDYLTEVEQLMDQARSAKRERITPRFDPAYEPTSYKIS  363
                +++DY +I+ KWY+ GL  + ++K   YK E  YL EV +LM QA++AKRERITP  D AY+P SY IS
Subject    969  NRADYEQIDDKWYHTGLDPTAVRKTTSYKTETGYLEEVNELMKQAKAAKRERITPILDSAYKPESYTIS  1175

Range 2: 813 to 962 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
65.2 bits(136) 0.0 28/50(56%) 0/50(0%) Plus/Plus
Query        4  LKKEELIRRISQAKRNASFVR*AVDDGRAEVVNDRVYLYPEVSVDVVNKA  153
                +KK++LIRRI+ AKRNA+ V  A+DDGRA ++++RVY YP V V  V+ A
Subject    813  VKKQDLIRRIATAKRNANSVSSAIDDGRAVLLDNRVYFYPVVDVKEVDAA  962

Range 3: 818 to 961 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.4 bits(108) 0.0 27/48(56%) 0/48(0%) Minus/Minus
Query        9  ALFTTSTDTSG*RYTRSLTTSARPSSTA*RTKEALRLACEIRLISSSF  152
                A  T+ T T+G*+YTR    +ARPSS A  T+ ALRLA  IRLI S F
Subject    818  AASTSLTSTTG*KYTRLSRRTARPSSIAEETELALRLAVAIRLIKSCF  961

Range 4: 1100 to 1177 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.8 bits(50) 0.0 14/26(54%) 0/26(0%) Minus/Minus
Query      288  SEIL*DVGS*AGSKRGVIRSRFAERA  365
                SE++ D G  A S+ GVI SRFA  A
Subject   1100  SEMVYDSGLYAESRMGVILSRFAALA  1177

Botryosphaeria dothidea partitivirus 1 isolate LW 1 segment RNA 2 putative coat protein (CP) gene, complete cds

Sequence ID: KF688741.1 Length: 1623 Number of Matches: 1

Range 1: 1024 to 1134 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.2 bits(101) 0.0 17/37(46%) 0/37(0%) Plus/Plus
Query      253  DYLTEVEQLMDQARSAKRERITPRFDPAYEPTSYKIS  363
                DY  E+E+L ++AR  K++  TPRFD +Y+ +SY +S
Subject   1024  DYAEEIEELFERARGLKKQMTTPRFDVSYQSSSYVVS  1134

Nucleotide Sequence (328 letters)

Query ID:ds2016-57_12
Query definition:No definition line
Query length:638
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 3 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
33
66
99
132
165
198
231
264
297
328

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
183.4 813.8 46% 8.531e-45 64% KY352403.1
110.6 214.7 28% 7.156e-23 58% KF688741.1

Alignments

Alternaria alternata partitivirus 1 isolate Avi1 segment RNA2, complete sequence

Sequence ID: KY352403.1 Length: 1680 Number of Matches: 6

Range 1: 188 to 502 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
183.4 bits(394) 0.0 85/105(81%) 0/105(0%) Minus/Minus
Query        8  PSASNLTFSIRWYSWRAEQWRNSSYEKRAGIEGFTEMRRW*DELTMWKYLSVLNGDKILSR*PERLKP*LSRAALPSA*PGVDLEDEDSVFELEDFGGPDPLPLP  322
                P+ASNLTFSIR Y+WRAEQ RNSSY KR GIEG T +RR *D LTMWK LSVLNGDKILSR PERLKP*L RAALPSA PGVDLE E SVFELED G P PLPLP
Subject    188  PNASNLTFSIR*YNWRAEQ*RNSSYVKRLGIEGLTLIRR**DALTMWKNLSVLNGDKILSRYPERLKP*LRRAALPSAKPGVDLEFEVSVFELEDLGLPFPLPLP  502

Range 2: 267 to 506 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
147.2 bits(315) 0.0 71/80(89%) 0/80(0%) Plus/Plus
Query       87  YAEGNAAXXXXXXXXXXXRERILSPFKTDKYFHMVSSSYQRLISVKPSIPARFSYEEFLHCSALQLYQRMENVKFDALGI  326
                +AEGNAALLSYGLSLSGYRERILSPFKTDK+FH+VS+SYQRLI+VKPSIP+RF+YEEFLHCSALQLYQR+ENVKFDALG+
Subject    267  FAEGNAALLSYGLSLSGYRERILSPFKTDKFFHIVSASYQRLINVKPSIPSRFTYEEFLHCSALQLYQRIENVKFDALGV  506

Range 3: 194 to 496 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
129.8 bits(277) 0.0 65/101(64%) 0/101(0%) Plus/Plus
Query       14  GQRVWPPKVLEFEDRVFVL*IDTRLCRGQCCPT*LRFEPFWLPRENLVAV*D*QVLPHGEFVLPTSHLGETLDSCSFLI*GISPLLRSPTVPTYGECQI*C  316
                GQR    +VLEFEDR F L IDTRLCRGQCCP  L FE  W+ RENLVAV*D*QVLPH E VL T      LDS  F +* IS LLRSP V TY + Q+*C
Subject    194  GQRERQSQVLEFEDRDFELQIDTRLCRGQCCPPQLWFESLWVSRENLVAV*D*QVLPHCECVLSTPDQC*ALDS*PFHV*RISSLLRSPIVSTY*KRQV*C  496

Range 4: 184 to 495 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
124.8 bits(266) 0.0 70/104(67%) 0/104(0%) Plus/Plus
Query        4  SRVRAKGLAXXXXXXXXXXXXXXNRHPAMPRAMLPYLATV*AFLVTARESCRRLRLTSTSTW*VRPTNVSSR*NPRFLLVSHMRNFSIAPLSNCTNVWRMSNLM  315
                +  RAKG A  SPRVRRP LR  NRHPA+PRAMLP  A V*  L  ARESCRRLRLTS+ST *VRP N  S  +PRFL VS M+NF IAPLSNC NV + S+LM
Subject    184  TEARAKGKAIPSPRVRRPRLRTPNRHPALPRAMLPSSAMV*VSLGIARESCRRLRLTSSSTL*VRPINA*SMLSPRFLAVSRMKNFFIAPLSNCINVLKTSSLM  495

Range 5: 264 to 494 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
121.6 bits(259) 0.0 52/77(68%) 0/77(0%) Minus/Minus
Query       84  IKFDILHTLVQLESGAMEKFLI*ETSRNRGFHRDETLVGRTHHVEVLVSLKRRQDSLAVTRKAQTVAK*GSIALGIA  314
                IK D+ +TL+QLESGAM+KF I ET+RNRG + D+ L+GRTH+VE LVSLKRRQDSLA+ R+ QT+A+ GSIALG A
Subject    264  IKLDVFNTLIQLESGAMKKFFIRETARNRGLNIDQALIGRTHNVEELVSLKRRQDSLAIPRETQTIAEEGSIALGKA  494

Range 6: 253 to 495 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.9 bits(227) 0.0 52/81(64%) 0/81(0%) Minus/Minus
Query       73  HQI*HSPYVGTVGERSNGEIPHMRNEQESRVSPR*DVGRTNSPCGSTCQS*TATRFSRGNQKGSNRS*VGQHCPRHSRVSI  315
                HQ *   YV T+GERSN EI H  N  ESR      V RT+S CG TCQS*TATRFSR  Q+ SN S* GQHCPR SRVSI
Subject    253  HQT*RFQYVDTIGERSNEEILHT*NG*ESRA*H*SGVDRTHSQCGRTCQS*TATRFSRDTQRDSNHS*GGQHCPRQSRVSI  495

Botryosphaeria dothidea partitivirus 1 isolate LW 1 segment RNA 2 putative coat protein (CP) gene, complete cds

Sequence ID: KF688741.1 Length: 1623 Number of Matches: 2

Range 1: 232 to 471 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
110.6 bits(235) 0.0 52/80(65%) 0/80(0%) Plus/Plus
Query       87  YAEGNAAXXXXXXXXXXXRERILSPFKTDKYFHMVSSSYQRLISVKPSIPARFSYEEFLHCSALQLYQRMENVKFDALGI  326
                ++EG + L +YGLS+SG +ERILSPFK DK+FH V  S+Q+L+SVKPS+P RFS  E+ H SALQLYQR+E VKFD+LGI
Subject    232  FSEGTSVLQNYGLSVSGRKERILSPFKADKFFHFVEQSWQKLVSVKPSLPNRFSLAEYRHASALQLYQRIEAVKFDSLGI  471

Range 2: 195 to 473 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
104.2 bits(221) 0.0 54/93(58%) 0/93(0%) Minus/Minus
Query       50  LIPSASNLTFSIRWYSWRAEQWRNSSYEKRAGIEGFTEMRRW*DELTMWKYLSVLNGDKILSR*PERLKP*LSRAALPSA*PGVDLEDEDSVF  328
                LIP  SNLT SIRWYS  AE  R S+ E R G  G T+     D  T WK LS LNGD+ILS  PE L P*  R  +PS  PGVDLE EDSVF
Subject    195  LIPRESNLTASIRWYS*SAEACRYSARENRFGRLGLTDTSFCHDCSTKWKNLSALNGDRILSLRPETLSP*F*RTEVPSENPGVDLELEDSVF  473