Nucleotide Sequence (354 letters)
Query ID: | ds2016-133_14 |
Query definition: | No definition line |
Query length: | 603 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
57.4 | 57.4 | 14% | 8.356e-07 | 53% | AY368590.1 | |
56.1 | 56.1 | 14% | 2.167e-06 | 53% | KX274275.1 | |
66.1 | 364.7 | 11% | 2.001e-09 | 69% | JX904130.1 | |
62.0 | 284.8 | 8% | 3.489e-08 | 79% | KJ716849.1 |
Alignments
Rupestris stem pitting associated virus strain Syrah, complete genome
Sequence ID: AY368590.1 Length: 8742 Number of Matches: 1
Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome
Sequence ID: KX274275.1 Length: 8724 Number of Matches: 1
Uncultured marine virus clone SOG02701, complete genome
Sequence ID: JX904130.1 Length: 1326 Number of Matches: 6
Range 1: 286 to 420 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
66.1 bits(138) | 0.0 | 31/45(69%) | 0/45(0%) | Minus/Plus |
Query 173 LSSEVARLYKSVSVARVRPRTSKGITDLLLPQTSLA*AAIVPLRS 307 L S+ +L + VSV R+RPRTSKGITDLLLPQTS * IVPLRS Subject 286 LLSQDGQLVQLVSVTRMRPRTSKGITDLLLPQTSTG*TPIVPLRS 420
Range 2: 286 to 417 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
65.7 bits(137) | 0.0 | 31/44(70%) | 0/44(0%) | Plus/Minus |
Query 176 S*RDYGRLGQGSLRQ*QVCDALRCSGPHARYTDRLVKPSHLTRE 307 S*RDY GSLRQ*QVCDAL CSGPH RYTD L K S L +E Subject 286 S*RDYRCSTGGSLRQ*QVCDALGCSGPHPRYTDELNKLSILAQE 417
Range 3: 321 to 431 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
62.0 bits(129) | 0.0 | 27/37(73%) | 0/37(0%) | Minus/Plus |
Query 162 QCSARAAQNI*GHHRPVIASNFLGLSGHSPSKKLAAE 272 QC+A AAQNI GHHRPVIASNF L+ SPSKKL A+ Subject 321 QCNADAAQNIQGHHRPVIASNFHRLNTDSPSKKLPAD 431
Range 4: 317 to 430 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
59.3 bits(123) | 0.0 | 27/38(71%) | 0/38(0%) | Plus/Minus |
Query 163 SAASFLEGLWPLRPRKFEAITGL*CP*MFWAARALH*Q 276 SA +FLEGL KFEAITGL*CP MFWAA ALH*+ Subject 317 SAGNFLEGLSVFNRWKFEAITGL*CPWMFWAASALH*R 430
Ngari virus strain Adrar segment M, complete sequence
Sequence ID: KJ716849.1 Length: 4507 Number of Matches: 5
Range 1: 4428 to 4505 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
62.0 bits(129) | 0.0 | 24/26(92%) | 0/26(0%) | Plus/Minus |
Query 48 LDSMGGGAWPFLVGGAICLVNSVNER 125 LDS+GGGAWPFLVGGAICLVNS NER Subject 4428 LDSVGGGAWPFLVGGAICLVNSDNER 4505
Range 2: 4427 to 4507 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
57.0 bits(118) | 0.0 | 23/27(85%) | 0/27(0%) | Plus/Minus |
Query 46 FLILWEVVHGRS*LVERFVWLIPLTNE 126 F I W VVHGRS*LVERFVWLIP+TNE Subject 4427 FSIPWVVVHGRS*LVERFVWLIPITNE 4507
Range 3: 4429 to 4500 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
56.5 bits(117) | 0.0 | 22/24(92%) | 0/24(0%) | Plus/Minus |
Query 53 FYGRWCMAVLSWWSDLSG*FR*RT 124 F G WCMAVLSWWSDLSG*FR*RT Subject 4429 FRGWWCMAVLSWWSDLSG*FR*RT 4500