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Nucleotide Sequence (307 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 1 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
31
62
93
124
155
186
217
248
279
307

Descriptions

Alignments

Botrytis porri RNA virus 1 RNA 2, complete genome

Sequence ID: NC_017991.1 Length: 5879 Number of Matches: 1

Range 1: 2820 to 3014 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
60.6 bits(126) 0.0 25/65(38%) 0/65(0%) Plus/Plus
Query       63  GQRNILNLRGEPKLLYFGTKPENEPLRDRLKDAGTAKDLVSHYEPTFDLDSAPRQTHPTHSIEIG  257
                G R +  ++G PK+LY GT P +  +  RL   GT   L +HYEP FD D+A         I+ G
Subject   2820  GLRRVGTIKGAPKMLYVGTVPAHNTMAXRLAHTGTGPQLAAHYEPFFDQDAAANTVQTDLPIKAG  3014

Botrytis porri RNA virus 1 strain GarlicBc 72 segment 2, complete sequence

Sequence ID: JF716351.1 Length: 5879 Number of Matches: 1

Range 1: 2820 to 3014 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
60.6 bits(126) 0.0 25/65(38%) 0/65(0%) Plus/Plus
Query       63  GQRNILNLRGEPKLLYFGTKPENEPLRDRLKDAGTAKDLVSHYEPTFDLDSAPRQTHPTHSIEIG  257
                G R +  ++G PK+LY GT P +  +  RL   GT   L +HYEP FD D+A         I+ G
Subject   2820  GLRRVGTIKGAPKMLYVGTVPAHNTMAXRLAHTGTGPQLAAHYEPFFDQDAAANTVQTDLPIKAG  3014

Sclerotinia sclerotiorum botybirnavirus 1 segment 2, complete sequence

Sequence ID: KP774593.1 Length: 5965 Number of Matches: 1

Range 1: 2542 to 2700 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.5 bits(117) 0.0 22/53(42%) 0/53(0%) Plus/Plus
Query       60  LGQRNILNLRGEPKLLYFGTKPENEPLRDRLKDAGTAKDLVSHYEPTFDLDSA  218
                LG R+   + GEP+L+Y G +P      +R+ +A  A  L SHYEP FD ++A
Subject   2542  LGVRSTNTVTGEPRLIYLGLRPAIVQYEERMSEAQDASGLASHYEPAFDFNNA  2700

Sclerotinia sclerotiorum botybirnavirus 1 segment 2, complete sequence

Sequence ID: NC_027139.1 Length: 5965 Number of Matches: 1

Range 1: 2542 to 2700 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.5 bits(117) 0.0 22/53(42%) 0/53(0%) Plus/Plus
Query       60  LGQRNILNLRGEPKLLYFGTKPENEPLRDRLKDAGTAKDLVSHYEPTFDLDSA  218
                LG R+   + GEP+L+Y G +P      +R+ +A  A  L SHYEP FD ++A
Subject   2542  LGVRSTNTVTGEPRLIYLGLRPAIVQYEERMSEAQDASGLASHYEPAFDFNNA  2700

Soybean leaf associated botybirnavirus 1 isolate SaBRV1 1 segment RNA1, partial sequence

Sequence ID: KT598233.1 Length: 3667 Number of Matches: 1

Range 1: 2204 to 2350 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.2 bits(112) 0.0 21/49(43%) 0/49(0%) Plus/Plus
Query       60  LGQRNILNLRGEPKLLYFGTKPENEPLRDRLKDAGTAKDLVSHYEPTFD  206
                LG R    L G+P+++YFG KP+ +    R++ A    + V HYEPTFD
Subject   2204  LGVRTSNTLFGDPRIMYFGPKPDVKDYNSRMEHAHDLDNTVKHYEPTFD  2350