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Queries

Nucleotide Sequence (408 letters)

Query ID:ds2016-133_52
Query definition:No definition line
Query length:332
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 31 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
41
82
123
164
205
246
287
328
369
408

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
256.5 256.5 30% 8.542e-83 100% AID16020

Alignments

coat protein [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|AID16020.1| Length: 259 Number of Matches: 1

Range 1: 138 to 259 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
256.5 bits(654) 0.0 122/122(100%) 0/122(0%) Plus/Plus
Query       12  GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE  377
                GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE
Subject    138  GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE  259

Nucleotide Sequence (955 letters)

Query ID:ds2016-133_52
Query definition:No definition line
Query length:332
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 31 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
96
192
288
384
480
576
672
768
864
955

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
655.2 655.2 33% 0 99% AQN80527

Alignments

replicase [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|AQN80527.1| Length: 2161 Number of Matches: 1

Range 1: 1002 to 1318 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
655.2 bits(1689) 0.0 314/317(99%) 0/317(0%) Minus/Plus
Query        3  GSFEVFKGDFNIKKMEEGSIFVITYKAPVRSTGKLRVHKTECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLGTDGLALKAGIRSFVESECLVSPNLSAPTIHKQLGENVYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCKPSTYHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGSGPQSIKVDELRKVKRSALDFLSMNGSKITYFPNFERAEKLQGSL  953
                GSFEVFKGDFNIKKMEEGSIFVITYKAPVRSTGKLRVHKTECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLL TDGLALKAGIRSFVESECLVSPNLSAPTIHKQLGENVYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCKPST HIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGSGPQSIKVDELRKVKRSALDFLSMNGSKITYFPNFERAEKLQG L
Subject   1002  GSFEVFKGDFNIKKMEEGSIFVITYKAPVRSTGKLRVHKTECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESECLVSPNLSAPTIHKQLGENVYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCKPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGSGPQSIKVDELRKVKRSALDFLSMNGSKITYFPNFERAEKLQGCL  1318

Nucleotide Sequence (384 letters)

Query ID:ds2016-133_52
Query definition:No definition line
Query length:332
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 31 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
39
78
117
156
195
234
273
312
351
384

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
181.0 181.0 31% 4.691e-49 76% AAR31772

Alignments

RNA-dependent RNA polymerase [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|AAR31772.1| Length: 2161 Number of Matches: 1

Range 1: 581 to 700 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
181.0 bits(458) 0.0 91/120(76%) 0/120(0%) Plus/Plus
Query       24  GFQWSLLKQRVNLKFLKGSETSFVELSSEVARLYKSVVLQALSPSASSGLAKVYVDHSSSQLCSDSHFTSDDELSNPALANDLTFEELLPGDFQGSQTAEQIACAHPTNDALRIDLAPPS  383
                G QW LLKQR+NLKFLKGSETSFVELS  VA+LYKSV+LQ  SP+A SGLA+VYVDHSSSQLCS SHF SDDEL NPALA+++T E  L  D QG QT EQ ACAHP NDAL IDLAPPS
Subject    581  GLQWFLLKQRINLKFLKGSETSFVELSCGVAKLYKSVILQVSSPNALSGLARVYVDHSSSQLCSGSHFMSDDELPNPALADNITSEASLSEDCQGFQTVEQAACAHPINDALCIDLAPPS  700

Nucleotide Sequence (357 letters)

Query ID:ds2016-133_52
Query definition:No definition line
Query length:332
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 31 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
36
72
108
144
180
216
252
288
324
357

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
248.1 248.1 33% 1.619e-72 99% AQN80517

Alignments

replicase [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|AQN80517.1| Length: 2161 Number of Matches: 1

Range 1: 139 to 256 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
248.1 bits(632) 0.0 117/118(99%) 0/118(0%) Plus/Plus
Query        3  ISSSDKSNHVVSKKGIGDSDSLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVGSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLK  356
                ISSSDKSNHV+SKKGIGDSDSLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVGSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLK
Subject    139  ISSSDKSNHVISKKGIGDSDSLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVGSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLK  256

Nucleotide Sequence (1752 letters)

Query ID:ds2016-133_52
Query definition:No definition line
Query length:332
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 31 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
176
352
528
704
880
1056
1232
1408
1584
1752

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
434.9 434.9 13% 2.049e-146 95% BAF34850

Alignments

24.4 kDa hypothetical protein [Grapevine rupestris stem pitting-associated virus]

Sequence ID: dbj|BAF34850.1| Length: 221 Number of Matches: 1

Range 1: 1 to 221 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
434.9 bits(1117) 0.0 210/221(95%) 0/221(0%) Minus/Plus
Query      548  MNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFTAFTAGVPDTPNLSGRYIKPYSPGCAVKGRINILDEYLSVDDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNVRSDGLDEVITGSPFELDVEGVLICFGKEAVDLAVAHDSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ  1210
                MNNLVKALSTFEFVG+YSVLRFPVVVHSVPGSGKSSLIREL+TEDESF AFTAGVPDTPNLSGRYIKPYSPGCAVKG+INILDEYLSV DISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFN+ SD  DEVITGSPFELDVEGVLICFGKEAVDLA AH+SDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ
Subject      1  MNNLVKALSTFEFVGIYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ  221

Nucleotide Sequence (347 letters)

Query ID:ds2016-133_52
Query definition:No definition line
Query length:332
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 31 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
35
70
105
140
175
210
245
280
315
347

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
202.2 202.2 31% 2.707e-63 90% AER41979

Alignments

RNA-dependent RNA polymerase, partial [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|AER41979.1| Length: 158 Number of Matches: 1

Range 1: 18 to 126 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
202.2 bits(513) 0.0 98/109(90%) 0/109(0%) Minus/Plus
Query        1  VLGVFGPELGYIEKKLMQALKPNFYIHSGIGFDELNEWVRVRGFTDVCTESGYEAFDASQDHFILAFELQIMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS  327
                VL  F P + YIEKKLMQALKPNFYIHSG G DEL+EWVR RGFTDVCTES YEAFDASQDHFILAFELQIMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS
Subject     18  VLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELDEWVRARGFTDVCTESDYEAFDASQDHFILAFELQIMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS  126

Nucleotide Sequence (373 letters)

Query ID:ds2016-133_52
Query definition:No definition line
Query length:332
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 31 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
38
76
114
152
190
228
266
304
342
373

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
254.2 254.2 32% 1.389e-74 98% AAR31772

Alignments

RNA-dependent RNA polymerase [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|AAR31772.1| Length: 2161 Number of Matches: 1

Range 1: 825 to 944 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
254.2 bits(648) 0.0 118/120(98%) 0/120(0%) Plus/Plus
Query        8  VTKTRNPVEGNHCSLTIEPSEFFEMPRGMQSNFFHGVSNCLSGRVSLTFRRQKLEDDDQIFVSPQVPIEQNHEKLDRNMWQMGLHGIKKSISINGTSFTSDLCSCYSCHNFHKFKDLINN  367
                V+KTRNPVEGNHCSLTIEPSEFFEMPRGMQSNFFHGVSNCLSGRVSLTFRRQKLEDDDQIFVSPQVPIEQNHEKLDRNMWQMGLHGIKKSISINGTSFTSDLCSC+SCHNFHKFKDLINN
Subject    825  VSKTRNPVEGNHCSLTIEPSEFFEMPRGMQSNFFHGVSNCLSGRVSLTFRRQKLEDDDQIFVSPQVPIEQNHEKLDRNMWQMGLHGIKKSISINGTSFTSDLCSCFSCHNFHKFKDLINN  944

Nucleotide Sequence (509 letters)

Query ID:ds2016-133_52
Query definition:No definition line
Query length:332
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 31 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
51
102
153
204
255
306
357
408
459
509

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
167.5 167.5 16% 2.222e-49 98% NP_047283

Alignments

12.8 kDa protein [Rupestris stem pitting-associated virus]

Sequence ID: ref|NP_047283.1| Length: 117 Number of Matches: 1

See 8 more title(s)

Range 1: 1 to 82 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
167.5 bits(423) 0.0 80/82(98%) 0/82(0%) Minus/Plus
Query        3  MPFQQPANWAKTITPLTVGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTTRITYCGPKQSFPSSGIFGQSENFVPLM  248
                MPFQQPANWAKTITPLTVGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGT  ITYCGPKQSFPSSGIFGQSENFVPLM
Subject      1  MPFQQPANWAKTITPLTVGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPKQSFPSSGIFGQSENFVPLM  82

Nucleotide Sequence (303 letters)

Query ID:ds2016-133_52
Query definition:No definition line
Query length:332
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 31 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
31
62
93
124
155
186
217
248
279
303

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
207.6 207.6 33% 1.127e-58 100% AAR31772

Alignments

RNA-dependent RNA polymerase [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|AAR31772.1| Length: 2161 Number of Matches: 1

Range 1: 378 to 477 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
207.6 bits(527) 0.0 100/100(100%) 0/100(0%) Minus/Plus
Query        3  GSLLMPNIPKLVISFFCRMMPNALARLSSNFRESSLDSFVYALEPFNFSISLIDITPDFFEHLFLFSCLNELIEDNVEEVMDNSWFGLSNAQFDRQRCPF  302
                GSLLMPNIPKLVISFFCRMMPNALARLSSNFRESSLDSFVYALEPFNFSISLIDITPDFFEHLFLFSCLNELIEDNVEEVMDNSWFGLSNAQFDRQRCPF
Subject    378  GSLLMPNIPKLVISFFCRMMPNALARLSSNFRESSLDSFVYALEPFNFSISLIDITPDFFEHLFLFSCLNELIEDNVEEVMDNSWFGLSNAQFDRQRCPF  477

Nucleotide Sequence (714 letters)

Query ID:ds2016-133_52
Query definition:No definition line
Query length:332
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 31 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
72
144
216
288
360
432
504
576
648
714

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
416.0 416.0 32% 1.751e-129 100% AQN80512

Alignments

replicase [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|AQN80512.1| Length: 2161 Number of Matches: 1

Range 1: 1674 to 1900 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
416.0 bits(1068) 0.0 226/227(100%) 0/227(0%) Plus/Plus
Query       34  REEKLCGDPWLKVMLFLGQXXXXXXXXXXXXXXXXXWFKTHIPLSNLESTRARWVGKMALKEYREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVSMFHEAVQEFEXXXXXXXXXTIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL  714
                REEKLCGDPWLKVMLFLGQDEDCEVEELESECSNEEWFKTHIPLSNLESTRARWVGKMALKEYREVRCGYE TQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVSMFHEAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL
Subject   1674  REEKLCGDPWLKVMLFLGQDEDCEVEELESECSNEEWFKTHIPLSNLESTRARWVGKMALKEYREVRCGYEATQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVSMFHEAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL  1900

Nucleotide Sequence (159 letters)

Query ID:ds2016-133_52
Query definition:No definition line
Query length:332
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 31 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
16
32
48
64
80
96
112
128
144
159

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
95.9 95.9 32% 2.133e-22 94% ABD79043

Alignments

triple gene block [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|ABD79043.1| Length: 221 Number of Matches: 1

Range 1: 1 to 51 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
95.9 bits(237) 0.0 48/51(94%) 0/51(0%) Plus/Plus
Query        5  MNNLVKALSTFEFVGVYSELRFPVVVHSVPGSGKRSLIRELITEDESFTAF  157
                MNNLVKALSTFEFVGVYS LRFPVVVHSVPGSGK SLIRELITEDESF AF
Subject      1  MNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAF  51

Nucleotide Sequence (756 letters)

Query ID:ds2016-133_52
Query definition:No definition line
Query length:332
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 31 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
76
152
228
304
380
456
532
608
684
756

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
499.2 499.2 32% 5.741e-159 99% AAR31772

Alignments

RNA-dependent RNA polymerase [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|AAR31772.1| Length: 2161 Number of Matches: 1

Range 1: 966 to 1208 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
499.2 bits(1284) 0.0 241/243(99%) 0/243(0%) Plus/Plus
Query       27  GTGLSQVLAMPRSKKQSILVLEGALSLETDYGPKILGSFEVFKGDFNIKKIEDSSIFVISYRAPVRSTGKLRVHKSACSFSGSRELLLDCQIEASADFEIEDFNTFPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDPALSSPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPS  755
                GTGLSQVLAMPRSKKQSILVLEGALSLETDYGPKILGSFEVFKGDFNIKKIEDSSIFVISYRAPVRSTGKLRVHKSACSFSGSRELLL CQIEASADFEIEDFNTFPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDPALS+PTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPS
Subject    966  GTGLSQVLAMPRSKKQSILVLEGALSLETDYGPKILGSFEVFKGDFNIKKIEDSSIFVISYRAPVRSTGKLRVHKSACSFSGSRELLLGCQIEASADFEIEDFNTFPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDPALSNPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPS  1208

Nucleotide Sequence (1316 letters)

Query ID:ds2016-133_52
Query definition:No definition line
Query length:332
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 31 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
132
264
396
528
660
792
924
1056
1188
1316

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
889.8 889.8 33% 0 98% AQN80517

Alignments

replicase [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|AQN80517.1| Length: 2161 Number of Matches: 1

Range 1: 1088 to 1525 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
889.8 bits(2298) 0.0 429/438(98%) 0/438(0%) Minus/Plus
Query        2  LSTDGLALKAGIRSFVESESTVDPALSSLTIQKQLGENAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVEVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLVEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMT  1315
                LSTDGLALKAGIRSFVESES VDPALS  TI+KQLGENAYAENEMIALFC+RHHVRLIIITPEYEVSWKFGE+EWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREV+VLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMD+ECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRL+EGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMT
Subject   1088  LSTDGLALKAGIRSFVESESPVDPALSGPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMT  1525

Nucleotide Sequence (490 letters)

Query ID:ds2016-133_52
Query definition:No definition line
Query length:332
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 31 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
49
98
147
196
245
294
343
392
441
490

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
263.5 263.5 26% 1.599e-85 98% ABD79043

Alignments

triple gene block [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|ABD79043.1| Length: 221 Number of Matches: 1

Range 1: 95 to 221 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
263.5 bits(672) 0.0 125/127(98%) 0/127(0%) Minus/Plus
Query      109  DVLFSDPYQNISVPREAHFIKSKTCRFGKNTCKYLLSFGFDVHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ  489
                DVLFSDPYQNISVPREAHFIKSKTCRFGKNTCKYLLSFGFDVHSDRSDEVITGSPFELDVEGVLICFGKEAV+LAAAHNSDFKLPCEVRG TFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ
Subject     95  DVLFSDPYQNISVPREAHFIKSKTCRFGKNTCKYLLSFGFDVHSDRSDEVITGSPFELDVEGVLICFGKEAVNLAAAHNSDFKLPCEVRGTTFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ  221

Nucleotide Sequence (613 letters)

Query ID:ds2016-133_52
Query definition:No definition line
Query length:332
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 31 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
62
124
186
248
310
372
434
496
558
613

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
144.4 144.4 15% 3.418e-38 97% ADA79759

Alignments

coat protein [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|ADA79759.1| Length: 259 Number of Matches: 1

Range 1: 1 to 90 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.4 bits(363) 0.0 87/90(97%) 0/90(0%) Minus/Plus
Query        1  MASQIGKLPGESNEAFXXXXXXXXXXXXXXQPEGSNTSPTLSGVLAKRKRVIENALSKSVDMREVLKHETVVISPNVMDEGAIDELIRAF  270
                MASQIGKLPGESNEAFEARLKALELAR QKQPEGSNT PTLSGVLAKRKRVIENALSK+VDMREVLKHETVVISPNVMDEGAIDELIRAF
Subject      1  MASQIGKLPGESNEAFEARLKALELARTQKQPEGSNTPPTLSGVLAKRKRVIENALSKTVDMREVLKHETVVISPNVMDEGAIDELIRAF  90

Nucleotide Sequence (303 letters)

Query ID:ds2016-133_52
Query definition:No definition line
Query length:332
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 31 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
31
62
93
124
155
186
217
248
279
303

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
183.3 229.2 37% 3.013e-56 91% ABC67233

Alignments

capsid protein, partial [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|ABC67233.1| Length: 147 Number of Matches: 2

Range 1: 41 to 133 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
183.3 bits(464) 0.0 85/93(91%) 0/93(0%) Minus/Plus
Query        2  WAKKGFNENEKFDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF  280
                + + G  EN +FDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF
Subject     41  FGESGIAENAQFDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF  133

Range 2: 115 to 133 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.8 bits(107) 0.0 19/19(100%) 0/19(0%) Minus/Plus
Query      245  TGIPPANWAKKGFNENEKF  301
                TGIPPANWAKKGFNENEKF
Subject    115  TGIPPANWAKKGFNENEKF  133

Nucleotide Sequence (498 letters)

Query ID:ds2016-133_52
Query definition:No definition line
Query length:332
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 31 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
50
100
150
200
250
300
350
400
450
498

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
268.9 268.9 31% 5.414e-79 97% AAX40973

Alignments

replicase [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|AAX40973.1| Length: 2161 Number of Matches: 1

Range 1: 1673 to 1824 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
268.9 bits(686) 0.0 147/152(97%) 0/152(0%) Minus/Plus
Query        1  VWEGKLYGGPWLKVMLFLGQDXXXXXXXXXXXXXXXEWFKTHIPLSNLESTRARWVGKMALKEHREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPPN  456
                V E KLYG PWLKVMLFLGQDEDCEVEEMELECSNEEWFKTHIPLSNLESTRARWVGKMALKEHREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLD+FLSKVP N
Subject   1673  VREEKLYGDPWLKVMLFLGQDEDCEVEEMELECSNEEWFKTHIPLSNLESTRARWVGKMALKEHREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKVPLN  1824

Nucleotide Sequence (2651 letters)

Query ID:ds2016-133_52
Query definition:No definition line
Query length:332
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 31 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
266
532
798
1064
1330
1596
1862
2128
2394
2651

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
1758.4 1758.4 33% 0 98% AQN80512

Alignments

replicase [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|AQN80512.1| Length: 2161 Number of Matches: 1

Range 1: 956 to 1838 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1758.4 bits(4553) 0.0 865/883(98%) 0/883(0%) Plus/Plus
Query        3  QCDRVVFATTGAGLSKLLDVPRSKKQSILVLEGALAMDTSYGPKILGSFEVFKGDFNIKKIEDGSIFVISYRAPVRSPGKLRVHRTECSFSGSREVLLGCQIEASADYDIDDFNKFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESIADPALSTQTVLKQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMSALFDITNEHIRHVEKIGNGPQSIKVDELREVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGVSVEGFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQXXXXXXXXXXXXXXXXXWFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMHEAVQE  2651
                QCDRVVFATTGAGLSKLLDVPRSKKQSILVLEGALAMDT YGPKILGSFEVFKGDFNIKKIEDGSIFVISYRAPVRSPGKLRVHRTECSFSGSREVLLGCQIEASADYDIDDFNKFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESIADPALSTQTVLKQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMSALFDITNEHIRHVEKIGNGPQSIKVDELR+VKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAF DYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGVSVEGFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGF+++IG+NEGVREEKLCGDPWLKVMLFLGQDEDCEVEE+ESECSNEEWFKTHIPLSNLESTRARWVGKMALKE+REVRCGYE TQQFFDEHR G  EQLSNACERFESIYPRHKGNDS+TFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHN ++ HEAVQE
Subject    956  QCDRVVFATTGAGLSKLLDVPRSKKQSILVLEGALAMDTGYGPKILGSFEVFKGDFNIKKIEDGSIFVISYRAPVRSPGKLRVHRTECSFSGSREVLLGCQIEASADYDIDDFNKFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESIADPALSTQTVLKQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFTDYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGVSVEGFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFSINIGKNEGVREEKLCGDPWLKVMLFLGQDEDCEVEELESECSNEEWFKTHIPLSNLESTRARWVGKMALKEYREVRCGYEATQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVSMFHEAVQE  1838

Nucleotide Sequence (603 letters)

Query ID:ds2016-133_52
Query definition:No definition line
Query length:332
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 31 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
61
122
183
244
305
366
427
488
549
603

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
248.4 248.4 21% 3.787e-79 97% AQN80513

Alignments

triple gene block protein 1 [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|AQN80513.1| Length: 221 Number of Matches: 1

Range 1: 1 to 126 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
248.4 bits(633) 0.0 122/126(97%) 0/126(0%) Minus/Plus
Query        3  MNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNISVPREAHFIKTKTCRC*HQTC  380
                MNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNISVPREAHFIKTKTCR    TC
Subject      1  MNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNISVPREAHFIKTKTCRFGANTC  126

Nucleotide Sequence (523 letters)

Query ID:ds2016-133_52
Query definition:No definition line
Query length:332
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 31 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
53
106
159
212
265
318
371
424
477
523

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
298.5 298.5 31% 3.085e-89 97% AAR31772

Alignments

RNA-dependent RNA polymerase [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|AAR31772.1| Length: 2161 Number of Matches: 1

Range 1: 1673 to 1834 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
298.5 bits(763) 0.0 157/162(97%) 0/162(0%) Minus/Plus
Query        3  VRAEKLCGDPWLKVMLFLGQDXXXXXXXXXXXXXXXEWFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGKSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLVHE  488
                VR EKLCGDPWLKVMLFLGQDEDCEVEELE+ECSNEEWFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCG+SE+LSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANL+HE
Subject   1673  VREEKLCGDPWLKVMLFLGQDEDCEVEELESECSNEEWFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEKLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMHE  1834

Nucleotide Sequence (325 letters)

Query ID:ds2016-133_52
Query definition:No definition line
Query length:332
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 31 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
33
66
99
132
165
198
231
264
297
325

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
213.4 213.4 33% 4.074e-66 93% AAQ19969

Alignments

replicase, partial [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|AAQ19969.1| Length: 276 Number of Matches: 1

Range 1: 73 to 180 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
213.4 bits(542) 0.0 100/108(93%) 0/108(0%) Minus/Plus
Query        1  DVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSG  324
                D++HSKF HHLLSFTP+ NLL SN+RCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDF+SLVISCGRSG
Subject     73  DIIHSKFSHHLLSFTPMGNLLASNMRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFSSLVISCGRSG  180

Nucleotide Sequence (739 letters)

Query ID:ds2016-133_52
Query definition:No definition line
Query length:332
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 31 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
74
148
222
296
370
444
518
592
666
739

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
339.7 339.7 24% 3.171e-114 94% ABD79043

Alignments

triple gene block [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|ABD79043.1| Length: 221 Number of Matches: 1

Range 1: 1 to 178 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
339.7 bits(870) 0.0 168/178(94%) 0/178(0%) Minus/Plus
Query        2  MNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVNDFSDFDVLFSDPYQNISVPRVALFMKSKSCRFGNNGC*FLLSFGFDVHSDRFDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKL  535
                MNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVNDFSDFDVLFSDPYQNISVPR A F+KSK+CRFG N C +LLSFGFDVHSDR DEVITGSPFELDVEGVLICFGKEAV+LAAAHNSDFKL
Subject      1  MNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVNDFSDFDVLFSDPYQNISVPREAHFIKSKTCRFGKNTCKYLLSFGFDVHSDRSDEVITGSPFELDVEGVLICFGKEAVNLAAAHNSDFKL  178

Nucleotide Sequence (426 letters)

Query ID:ds2016-133_52
Query definition:No definition line
Query length:332
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 31 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
43
86
129
172
215
258
301
344
387
426

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
167.2 167.2 26% 7.678e-48 94% AKZ17749

Alignments

coat protein [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|AKZ17749.1| Length: 259 Number of Matches: 1

Range 1: 1 to 109 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
167.2 bits(422) 0.0 103/109(94%) 0/109(0%) Minus/Plus
Query        1  MASQVGKLPGESNXXXXXXXXXXXXXXXXXAPEVSNQPPILSGILAKRKRVIENALSKTVDMREVLRHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIAQ  327
                MASQVGKLPGESNEAYEARLKALELARAQKAPEVSNQPP LSGILAKRKRVIENALSKTVDMREVLRHESVVLSPNVMDEGAIDELIRAFGESGI+E+ QF+VAIDIA+
Subject      1  MASQVGKLPGESNEAYEARLKALELARAQKAPEVSNQPPTLSGILAKRKRVIENALSKTVDMREVLRHESVVLSPNVMDEGAIDELIRAFGESGIAENAQFDVAIDIAR  109

Nucleotide Sequence (181 letters)

Query ID:ds2016-133_52
Query definition:No definition line
Query length:332
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 31 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
19
38
57
76
95
114
133
152
171
181

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
79.3 79.3 22% 5.379e-16 97% BAF34849

Alignments

RNA-dependent RNA polymerase, partial [Grapevine rupestris stem pitting-associated virus]

Sequence ID: dbj|BAF34849.1| Length: 266 Number of Matches: 1

Range 1: 228 to 266 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.3 bits(194) 0.0 38/39(97%) 0/39(0%) Minus/Plus
Query       65  SIEMMNEEEVEAHYNCVRFLVRNKHKMRYSISGLFEAID  181
                SIEMMNEEEVEAHYNCVRFLVRNKHKMR SISGLFEAID
Subject    228  SIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID  266

Nucleotide Sequence (184 letters)

Query ID:ds2016-133_52
Query definition:No definition line
Query length:332
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 31 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
19
38
57
76
95
114
133
152
171
184

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
108.6 108.6 31% 5.224e-27 95% ABD79043

Alignments

triple gene block [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|ABD79043.1| Length: 221 Number of Matches: 1

Range 1: 4 to 60 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
108.6 bits(270) 0.0 54/57(95%) 0/57(0%) Minus/Plus
Query       13  LVKALSTFEFVGVYSVLRFPVVVHSVPGSSKSSLIRELITEDESFTAFTAGVPNTPN  183
                LVKALSTFEFVGVYSVLRFPVVVHSVPGS KSSLIRELITEDESF AFTAGVP+TPN
Subject      4  LVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGVPDTPN  60

Nucleotide Sequence (1006 letters)

Query ID:ds2016-133_52
Query definition:No definition line
Query length:332
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 31 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
101
202
303
404
505
606
707
808
909
1006

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
233.4 233.4 12% 1.258e-70 99% ADA79799

Alignments

coat protein [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|ADA79799.1| Length: 259 Number of Matches: 1

See 1 more title(s)

Range 1: 1 to 116 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
233.4 bits(594) 0.0 115/116(99%) 0/116(0%) Minus/Plus
Query      223  MASPPGKLPGESNEAFEARLKSLELARAQKQPTGSNQPPTLGGVLAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIARHCSVVGS  570
                MASPPGKLPGESNEAFEARLKSLELARAQKQPTGSNQPPTLGGVLAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIARHCS VGS
Subject      1  MASPPGKLPGESNEAFEARLKSLELARAQKQPTGSNQPPTLGGVLAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIARHCSDVGS  116

Nucleotide Sequence (178 letters)

Query ID:ds2016-133_52
Query definition:No definition line
Query length:332
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 31 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
18
36
54
72
90
108
126
144
162
178

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
63.9 63.9 18% 1.508e-10 97% ABD79043

Alignments

triple gene block [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|ABD79043.1| Length: 221 Number of Matches: 1

Range 1: 19 to 50 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.9 bits(154) 0.0 31/32(97%) 0/32(0%) Plus/Plus
Query        1  VLRFPVVVHSVPGSGKSSLIRELITEDESFTA  96
                VLRFPVVVHSVPGSGKSSLIRELITEDESF A
Subject     19  VLRFPVVVHSVPGSGKSSLIRELITEDESFIA  50

Nucleotide Sequence (783 letters)

Query ID:ds2016-133_52
Query definition:No definition line
Query length:332
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 31 Blast Hits on the Query Sequence

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Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
79
158
237
316
395
474
553
632
711
783

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
525.0 525.0 33% 5.013e-168 98% AQN80517

Alignments

replicase [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|AQN80517.1| Length: 2161 Number of Matches: 1

Range 1: 1271 to 1530 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
525.0 bits(1351) 0.0 255/260(98%) 0/260(0%) Minus/Plus
Query        4  KIGNGPQSIKVDELRKVKRSALDLLSLNGSKTTYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDEECKVAKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRRDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFINPMFDSRLPCNFKKGSMTAAFAD  783
                KIGNGPQSIKVDELRKVKRSALDLLSLNGSK TYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK+DLEMDEECKV KAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIR DAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRF+NPMFDSRLPCNFKKGSMTAAFAD
Subject   1271  KIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFAD  1530

Nucleotide Sequence (137 letters)

Query ID:ds2016-133_52
Query definition:No definition line
Query length:332
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 31 Blast Hits on the Query Sequence

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Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
14
28
42
56
70
84
98
112
126
137

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
86.7 86.7 33% 5.087e-19 96% ABD79043

Alignments

triple gene block [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|ABD79043.1| Length: 221 Number of Matches: 1

Range 1: 11 to 55 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
86.7 bits(213) 0.0 43/45(96%) 0/45(0%) Minus/Plus
Query        1  FEFVGVYSVLRFPVVVHSVPGSGKSSLIRELISEDESFTAFTAGV  135
                FEFVGVYSVLRFPVVVHSVPGSGKSSLIRELI+EDESF AFTAGV
Subject     11  FEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGV  55

Nucleotide Sequence (388 letters)

Query ID:ds2016-133_52
Query definition:No definition line
Query length:332
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 31 Blast Hits on the Query Sequence

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Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
39
78
117
156
195
234
273
312
351
388

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
246.9 246.9 31% 5.063e-72 98% AQN80527

Alignments

replicase [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|AQN80527.1| Length: 2161 Number of Matches: 1

Range 1: 1322 to 1441 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
246.9 bits(629) 0.0 117/120(98%) 0/120(0%) Plus/Plus
Query       27  ILGVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKSDLEMDDGCKVAKAGRSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQ  386
                + GVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKSDLEMDDGCKVAKAGRSKKEGW+VVTFEVFLRKVAGLKAGHCVIFDEVQ
Subject   1322  LTGVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKSDLEMDDGCKVAKAGRSKKEGWNVVTFEVFLRKVAGLKAGHCVIFDEVQ  1441

Nucleotide Sequence (986 letters)

Query ID:ds2016-133_52
Query definition:No definition line
Query length:332
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 31 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
99
198
297
396
495
594
693
792
891
986

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
580.5 580.5 30% 0 98% AQN80512

Alignments

replicase [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|AQN80512.1| Length: 2161 Number of Matches: 1

Range 1: 372 to 668 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
580.5 bits(1495) 0.0 292/297(98%) 0/297(0%) Plus/Plus
Query        2  ISCGRSGSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGNAHFNRQRAPYSLGISHWLNSPFSVEHKFAGAINHQILHVALSLVPLSNDPFFKLTPREVDSALSSVRMALGITGQSKLFGFLVNDTLINEMQRRYKLRLAKHLKSLTWYFHFCGCQWXXXXXXXXXXXXGDRKTSFADLDCNVAQIYRLVSAQVTAPGVLLGLTKVYARYSNPQQQLNSLNVLEGKSCKSVQPSDTYSGET  892
                ISCGRSGSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGN HFNRQRAPYSLGISHWLNSPFSVEHKFAGAINHQILHVALSLVPLSNDPFFKLTPREVDSALSSVRMALGITGQSKLFGFLVNDTLINEMQRRYKLRLAKHLKSLTWYFHFCGCQWFLLNRRVNL+FLGDRK+SFADLDCNVAQIYRLVSAQVTAPGVLLGLTKVYA YSNPQQQLNSLNVLEGKSCK+VQPSDTYSGET
Subject    372  ISCGRSGSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGNVHFNRQRAPYSLGISHWLNSPFSVEHKFAGAINHQILHVALSLVPLSNDPFFKLTPREVDSALSSVRMALGITGQSKLFGFLVNDTLINEMQRRYKLRLAKHLKSLTWYFHFCGCQWFLLNRRVNLKFLGDRKSSFADLDCNVAQIYRLVSAQVTAPGVLLGLTKVYAHYSNPQQQLNSLNVLEGKSCKTVQPSDTYSGET  668