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Nucleotide Sequence (305 letters)

Query ID:ds2016-58_48
Query definition:No definition line
Query length:589
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 1 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
31
62
93
124
155
186
217
248
279
305

Descriptions

Alignments

Fusarium oxysporum chrysovirus 1 putative RNA polymerase gene, partial cds

Sequence ID: EF152346.1 Length: 2574 Number of Matches: 2

Range 1: 1753 to 1983 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.3 bits(195) 0.0 39/77(51%) 0/77(0%) Plus/Plus
Query       74  QVIREFASIPTAPSDYAMFADVIASRMYDMWLVDGEGNKHELSNGLFSGRRGTTWINSVLNNVYIIVAMECFALLYG  304
                QVIR+   +  AP DYA+F   I+  MY M +VD +G +H    GL+SG RGTTWIN+VLN VY   A   F  LYG
Subject   1753  QVIRKLEFVVDAPKDYALFVSAISEAMYHMVIVDPDGKQHPAGRGLYSGWRGTTWINTVLNCVYTNTAEASFERLYG  1983

Range 2: 1755 to 1982 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.0 bits(142) 0.0 35/76(46%) 0/76(0%) Minus/Minus
Query       76  PYNNAKHSMATMIYTLFNTELIQVVPRLPENRPFDNSCLLPSPSTSHMSYILLAITSANIA*SEGAVGMLANSLIT  303
                PY+ +K + A ++YT FNT LI VVP  PE  P    C LPS ST  M YI   +   N A*S GA    +N  IT
Subject   1755  PYSRSKLASAVLVYTQFNTVLIHVVPLQPEYSPLPAGCCLPSGSTITMWYIASDMAETNRA*SLGASTTNSNFRIT  1982

Raphanus sativas chrysovirus 1 segment RNA1 putative RNA dependent RNA polymerase gene, complete cds

Sequence ID: JQ045335.1 Length: 3638 Number of Matches: 3

Range 1: 2204 to 2431 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
102.8 bits(218) 0.0 38/76(50%) 0/76(0%) Plus/Plus
Query       74  QVIREFASIPTAPSDYAMFADVIASRMYDMWLVDGEGNKHELSNGLFSGRRGTTWINSVLNNVYIIVAMECFALLY  301
                +VI+  A IP  P DY+ F   IA   Y MW++D +G+KHE+  GLFSG RGTTWIN+VLN+VY+ + + C   +Y
Subject   2204  KVIQYLARIPGCPEDYSTFCCAIADSFYHMWVIDPDGDKHEIKKGLFSGWRGTTWINTVLNHVYVAIGVMCCERIY  2431

Range 2: 2203 to 2430 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.2 bits(149) 0.0 37/76(49%) 0/76(0%) Minus/Minus
Query       73  YNNAKHSMATMIYTLFNTELIQVVPRLPENRPFDNSCLLPSPSTSHMSYILLAITSANIA*SEGAVGMLANSLITW  300
                Y  ++H      YT FNT LIQVVPR PEN PF  SCL PS S +HM   L AI    + *S G  G+ A   IT+
Subject   2203  YILSQHITPIATYTWFNTVLIQVVPRQPENSPFLISCLSPSGSITHMW*KLSAIAQQKVE*SSGQPGIRARYCITF  2430

Range 3: 2240 to 2410 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.4 bits(119) 0.0 23/57(40%) 0/57(0%) Minus/Minus
Query      110  HGYNDIHVVQHRVNPGSSSPS*K*TV*QLMLVTFSIYQPHVIHPACYHIGKHRIVRR  280
                H Y  +HVVQH V+P   +P+*+*+   LM +   IY PHV+   CY   +  I+ R
Subject   2240  HSYCHVHVVQHCVDPSCPTPT*E*SFLNLMFIAVWIYHPHVVETICYSAAESGIILR  2410

Brassica campestris chrysovirus 1 isolate Hubei segment RNA1, complete sequence

Sequence ID: KP782031.1 Length: 3639 Number of Matches: 2

Range 1: 2223 to 2450 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
95.9 bits(203) 0.0 37/76(49%) 0/76(0%) Plus/Plus
Query       74  QVIREFASIPTAPSDYAMFADVIASRMYDMWLVDGEGNKHELSNGLFSGRRGTTWINSVLNNVYIIVAMECFALLY  301
                +VI     IP  P DY  F   IA   Y MW++D +G KH++  GLFSG RGTTWIN+VLN VY+ V + C   +Y
Subject   2223  KVIAMLEKIPGVPEDYGYFCHAIAESFYHMWVIDPKGGKHKIEKGLFSGWRGTTWINTVLNFVYVSVGVMCCERIY  2450

Range 2: 2225 to 2440 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.2 bits(112) 0.0 31/72(43%) 0/72(0%) Minus/Minus
Query       76  AKHSMATMIYTLFNTELIQVVPRLPENRPFDNSCLLPSPSTSHMSYILLAITSANIA*SEGAVGMLANSLIT  291
                ++H   T   T F+T LIQVVP  PEN PF   CL P  S +H+   L AI      *S G  G+ +N  IT
Subject   2225  SQHITPTDT*TKFSTVLIQVVPLQPENSPFSILCLPPFGSITHI**KLSAIA*QKYP*SSGTPGIFSNIAIT  2440

Verticillium dahliae chrysovirus 1 segment 1, complete sequence

Sequence ID: HM004067.2 Length: 3594 Number of Matches: 2

Range 1: 1181 to 1408 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.3 bits(195) 0.0 40/76(53%) 0/76(0%) Plus/Minus
Query       77  VIREFASIPTAPSDYAMFADVIASRMYDMWLVDGEGNKHELSNGLFSGRRGTTWINSVLNNVYIIVAMECFALLYG  304
                VI E       PSDYA F   ++S MYDM L D EG +H+L  GLFSG RGTTWIN+VLN  Y  +A+  +  LYG
Subject   1181  VIAELEHTVEGPSDYAYFVQAVSSSMYDMQLQDREGKRHKLWKGLFSGWRGTTWINTVLNFCYSNIALMNYQRLYG  1408

Range 2: 1230 to 1409 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.0 bits(118) 0.0 30/60(50%) 0/60(0%) Minus/Plus
Query       76  FNTELIQVVPRLPENRPFDNSCLLPSPSTSHMSYILLAITSANIA*SEGAVGMLANSLIT  255
                F T LI VVP  PEN PF + CLLPS S + +SYI L       A*S G   + +NS IT
Subject   1230  FKTVLIHVVPLHPENNPFHSLCLLPSLSCNCISYIELLTACTK*A*SLGPSTVCSNSAIT  1409

Cryphonectria nitschkei chrysovirus 1 from Cryphonectria nitschkei bs131 RNA dependent RNA polymerase gene, complete cds

Sequence ID: GQ290650.1 Length: 2889 Number of Matches: 2

Range 1: 2008 to 2235 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.3 bits(193) 0.0 39/76(51%) 0/76(0%) Plus/Plus
Query       77  VIREFASIPTAPSDYAMFADVIASRMYDMWLVDGEGNKHELSNGLFSGRRGTTWINSVLNNVYIIVAMECFALLYG  304
                VI+E      AP DY +F   I+  MY+M L D +GN+H++  GL+SG RGTTWINSVLN  YI VA+  F  +YG
Subject   2008  VIKELDLAVQAPEDYHIFVHAISESMYNMSLHDRDGNRHKIWRGLYSGWRGTTWINSVLNFCYIDVALTSFERIYG  2235

Range 2: 2007 to 2234 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.1 bits(116) 0.0 33/76(43%) 0/76(0%) Minus/Minus
Query       76  PYNNAKHSMATMIYTLFNTELIQVVPRLPENRPFDNSCLLPSPSTSHMSYILLAITSANIA*SEGAVGMLANSLIT  303
                PY  +K   AT +   F TELI VVP  PE +P    C LPS S   M YI   +   N+ *S GA    +NSL+T
Subject   2007  PYIRSKLVKATSM*QKFRTELIHVVPLHPEYKPRHILCRLPSLSCKLMLYIDSLMACTNM**SSGACTARSNSLMT  2234