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Queries

Nucleotide Sequence (640 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 10 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
64
128
192
256
320
384
448
512
576
640

Descriptions

Alignments

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: Hiz3

Sequence ID: AB277785.1 Length: 2876 Number of Matches: 8

Range 1: 581 to 1141 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
439.1 bits(952) 0.0 184/187(98%) 0/187(0%) Plus/Plus
Query       79  VGERICIAREMGNLEKCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHYLSIMNNLVKALSAFEFVGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQ  639
                + ERICIAREMGNLE CIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHYLSIMNNLVKALSAFEFVGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQ
Subject    581  IWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHYLSIMNNLVKALSAFEFVGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQ  1141

Range 2: 581 to 1141 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
402.5 bits(872) 0.0 175/187(94%) 0/187(0%) Minus/Minus
Query       79  LVWVREQHIKT*KILDGQVLIKYIHFPWHCTPWRIRLNVPSCEIRAVWNTCCESYEVFILGN*LPYXXXXXXXXXTMNDYWKFKHTENSYKLKC*QCFN*IIHNTQIMPNT*GLINRFK*A*N*ASHLMLVPDQESNTIIMSLHFFLGHHFNG*LSQPVRIGNLYRIIVNTFLQVTHLPSNAYPLPD  639
                LVWVRE HIKT*KILDGQVLIKYIHF WHCTPWRIRLNVPSCEIRAVWNTCCESYE+ ILGN LPY* TFTTTRHTMNDYWKFKHTEN+YKLKC*QCFN*IIHNTQIMPNT*GLINRFK*A*N*ASHLMLVPDQESNTIIM LHF LGHHFNG*LSQPV IG+LYRIIVNT LQVTHLPSNAYPLPD
Subject    581  LVWVRE*HIKT*KILDGQVLIKYIHFTWHCTPWRIRLNVPSCEIRAVWNTCCESYEILILGNQLPY*ATFTTTRHTMNDYWKFKHTENTYKLKC*QCFN*IIHNTQIMPNT*GLINRFK*A*N*ASHLMLVPDQESNTIIMGLHFLLGHHFNG*LSQPVCIGDLYRIIVNTILQVTHLPSNAYPLPD  1141

Range 3: 579 to 1142 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
381.8 bits(827) 0.0 176/188(94%) 0/188(0%) Minus/Minus
Query       77  FGMGPRTAHQNLKNLGRTSTHQVYSLSLALHTLENKA*CTFL*D*GCLEHLL*KL*SFHPRKLAPLLNYFYHYQAHYE*LLEI*AH*KXXXXXXXXXXXLNYS*YSNNAKYLRPNQSLQIGLKLSISSYACS*PRI*HNYNEPPLLPRSSFQWIALPAGTHRKPLSHNCQYISPGYPSP*QCISAPRL  640
                FGMGPR AHQNLKNLGRTSTHQVYSL LALHTLENKA*CTFL*D*GCLEHLL*KL*+ HPRK APLL+YFYHYQAHYE*LLEI*AH*K LQTQMLTML*LNYS*YSNNAKYLRPNQSLQIGLKLSISSYACS*PRI*HNYN PPL PRSSFQWIALPAG HR+PLSHNCQY SPGYPSP*QCISAPRL
Subject    579  FGMGPRIAHQNLKNLGRTSTHQVYSLYLALHTLENKA*CTFL*D*GCLEHLL*KL*NSHPRKSAPLLSYFYHYQAHYE*LLEI*AH*KHLQTQMLTML*LNYS*YSNNAKYLRPNQSLQIGLKLSISSYACS*PRI*HNYNGPPLPPRSSFQWIALPAGMHRRPLSHNCQYNSPGYPSP*QCISAPRL  1142

Range 4: 582 to 1142 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
371.3 bits(804) 0.0 176/187(94%) 0/187(0%) Plus/Plus
Query       80  SGSGYALLGRWVTWRNVLTIMR*RFPMRTGWESYPLK**PRKKWRLIIIVLDSWSGTSIR*DAQFQAYLKRLIRP*VFGII*VL*II*LKHCQHLSL*EFSVCLNFQ*SFIVCLXXXXXXXXGS*FPRMKTS*LSQQVFQTALISQEGTLSLILQGVQCQGK*IYLMSTCPSKIFQVLMCCSRTHTK  640
                SGSGYALLGRWVTWR VLTIMR*R PM TGWESYPLK**PR+KWR IIIVLDSWSGTSIR*DAQFQAYLKRLIRP*VFGII*VL*II*LKHCQHLSL* FSVCLNFQ*SFIVCLVVVKV **GS*FPRM+ S*LSQQVFQTALISQEGTLSLILQGVQCQ K*IYLMSTCPSKIFQVLMC SRTHTK
Subject    582  SGSGYALLGRWVTWRIVLTIMR*RSPMHTGWESYPLK**PRRKWRPIIIVLDSWSGTSIR*DAQFQAYLKRLIRP*VFGII*VL*II*LKHCQHLSL*VFSVCLNFQ*SFIVCLVVVKVA**GS*FPRMRIS*LSQQVFQTALISQEGTLSLILQGVQCQVK*IYLMSTCPSKIFQVLMCYSRTHTK  1142

Range 5: 586 to 1140 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
306.2 bits(662) 0.0 173/185(94%) 0/185(0%) Plus/Plus
Query       84  GADMHC*GDG*PGEMY*QLCDRGFLCVPAGRAIH*NXXXXXXXXXXXXC*ILGQEQA*DEMLNFRPI*SD*LGLKYLALFEYYE*FXXXXXXXXXCRSFQCA*IXXXXXXCAW*W*K*FNKGANFRG*KLHSFHSRCSRQP*SHRKVH*ALFSRVCSARESEYT**VLVXXXXXXXXCAVLGPIP  638
                GADMHC*GDG*PGE+Y*QLCDRG LC+PAGRAIH*NDDRG SGG L*LC*ILGQEQA*DEMLNFRPI*SD*LGLKYLALFEYYE*FS*SIVSI*VCR FQCA*ISSSHS*CAW*W*K* NKGA+FRG*+ HSFHSRCSRQP*SHRKVH*ALFSRVCSAR SEYT**VLVRPRFFRF*CA+LGPIP
Subject    586  GADMHC*GDG*PGELY*QLCDRGLLCIPAGRAIH*NDDRGGSGGPL*LC*ILGQEQA*DEMLNFRPI*SD*LGLKYLALFEYYE*FS*SIVSI*VCRCFQCA*ISSSHS*CAW*W*K*LNKGADFRG*EFHSFHSRCSRQP*SHRKVH*ALFSRVCSAR*SEYT**VLVRPRFFRF*CAILGPIP  1140

Range 6: 724 to 921 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
148.2 bits(317) 0.0 66/66(100%) 0/66(0%) Minus/Minus
Query      222  GTL*MTTGNLSTLKTPTNSNADNALTKLFIILK*CQILKA*SIASNRPEIEHLILCLFLTKNLTQL  419
                GTL*MTTGNLSTLKTPTNSNADNALTKLFIILK*CQILKA*SIASNRPEIEHLILCLFLTKNLTQL
Subject    724  GTL*MTTGNLSTLKTPTNSNADNALTKLFIILK*CQILKA*SIASNRPEIEHLILCLFLTKNLTQL  921

Range 7: 970 to 1140 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
139.9 bits(299) 0.0 56/57(98%) 0/57(0%) Minus/Minus
Query      468  WYGSENSTSKPEKSWTDKYSSSIFTFPGTAHPGE*GLMYLPVRLGLSGTPAVKAMKF  638
                WYGSENSTSKPEKSWTDKYSSSIFT PGTAHPGE*GLMYLPVRLGLSGTPAVKAMKF
Subject    970  WYGSENSTSKPEKSWTDKYSSSIFTLPGTAHPGE*GLMYLPVRLGLSGTPAVKAMKF  1140

Range 8: 586 to 669 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.9 bits(120) 0.0 27/28(96%) 0/28(0%) Minus/Minus
Query       84  RYA*ETSIA*LSIHFSRLPISLAMHIRS  167
                RYA*ETSIA*LSI FSRLPISLAMHIRS
Subject    586  RYA*ETSIA*LSIQFSRLPISLAMHIRS  669

Grapevine rupestris stem pitting associated virus isolate GRSPAV 1050 02 RNA dependent RNA polymerase (RdRp) gene, partial cds; and triple gene block 1 (TGB1), triple gene block 2 (TGB2), triple gene block 3 (TGB3), coat protein (CP), and 14 kDa protein (14K) genes, complete cds

Sequence ID: JX513892.1 Length: 8716 Number of Matches: 8

Range 1: 6317 to 6877 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
439.1 bits(952) 0.0 184/187(98%) 0/187(0%) Plus/Plus
Query       79  VGERICIAREMGNLEKCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHYLSIMNNLVKALSAFEFVGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQ  639
                + ERICIAREMGNLE CIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHYLSIMNNLVKALSAFEFVGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQ
Subject   6317  IWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHYLSIMNNLVKALSAFEFVGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQ  6877

Range 2: 6317 to 6877 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
412.1 bits(893) 0.0 178/187(95%) 0/187(0%) Minus/Minus
Query       79  LVWVREQHIKT*KILDGQVLIKYIHFPWHCTPWRIRLNVPSCEIRAVWNTCCESYEVFILGN*LPYXXXXXXXXXTMNDYWKFKHTENSYKLKC*QCFN*IIHNTQIMPNT*GLINRFK*A*N*ASHLMLVPDQESNTIIMSLHFFLGHHFNG*LSQPVRIGNLYRIIVNTFLQVTHLPSNAYPLPD  639
                LVWVREQHIKT*KILDGQVLIKYIHFPWHCTPWRIRLNVPSCEIRAVWNTCCESYE+ ILGN*LPY*TTFTTTRHTMNDYWKFKHTEN+YKLKC*QCFN*IIHNTQIMPNT*GLINRFK*A*N*ASHLMLVPDQESNTI+M LHFFLGHHFNG*LSQPV IG+LY IIVNT LQVTHLPSNAYPLPD
Subject   6317  LVWVREQHIKT*KILDGQVLIKYIHFPWHCTPWRIRLNVPSCEIRAVWNTCCESYEILILGN*LPY*TTFTTTRHTMNDYWKFKHTENTYKLKC*QCFN*IIHNTQIMPNT*GLINRFK*A*N*ASHLMLVPDQESNTIVMGLHFFLGHHFNG*LSQPVCIGDLYSIIVNTILQVTHLPSNAYPLPD  6877

Range 3: 6315 to 6878 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
387.8 bits(840) 0.0 179/188(95%) 0/188(0%) Minus/Minus
Query       77  FGMGPRTAHQNLKNLGRTSTHQVYSLSLALHTLENKA*CTFL*D*GCLEHLL*KL*SFHPRKLAPLLNYFYHYQAHYE*LLEI*AH*KXXXXXXXXXXXLNYS*YSNNAKYLRPNQSLQIGLKLSISSYACS*PRI*HNYNEPPLLPRSSFQWIALPAGTHRKPLSHNCQYISPGYPSP*QCISAPRL  640
                FGMGPRTAHQNLKNLGRTSTHQVYSLSLALHTLENKA*CTFL*D*GCLEHLL*KL*+ HPRKLAPLLNYFYHYQAHYE*LLEI*AH*K LQTQMLTML*LNYS*YSNNAKYLRPNQSLQIGLKLSISSYACS*PRI*HN N PPLLPRSSFQWIALPAG HR+PL HNCQY SPGYPSP*QCISAPRL
Subject   6315  FGMGPRTAHQNLKNLGRTSTHQVYSLSLALHTLENKA*CTFL*D*GCLEHLL*KL*NSHPRKLAPLLNYFYHYQAHYE*LLEI*AH*KHLQTQMLTML*LNYS*YSNNAKYLRPNQSLQIGLKLSISSYACS*PRI*HNCNGPPLLPRSSFQWIALPAGMHRRPL*HNCQYNSPGYPSP*QCISAPRL  6878

Range 4: 6318 to 6878 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
376.3 bits(815) 0.0 178/187(95%) 0/187(0%) Plus/Plus
Query       80  SGSGYALLGRWVTWRNVLTIMR*RFPMRTGWESYPLK**PRKKWRLIIIVLDSWSGTSIR*DAQFQAYLKRLIRP*VFGII*VL*II*LKHCQHLSL*EFSVCLNFQ*SFIVCLXXXXXXXXGS*FPRMKTS*LSQQVFQTALISQEGTLSLILQGVQCQGK*IYLMSTCPSKIFQVLMCCSRTHTK  640
                SGSGYALLGRWVTWR VLTIM *R PM TGWESYPLK**PRKKWR I IVLDSWSGTSIR*DAQFQAYLKRLIRP*VFGII*VL*II*LKHCQHLSL* FSVCLNFQ*SFIVCLVVVKVV**GS*FPRM+ S*LSQQVFQTALISQEGTLSLILQGVQCQGK*IYLMSTCPSKIFQVLMCCSRTHTK
Subject   6318  SGSGYALLGRWVTWRIVLTIML*RSPMHTGWESYPLK**PRKKWRPITIVLDSWSGTSIR*DAQFQAYLKRLIRP*VFGII*VL*II*LKHCQHLSL*VFSVCLNFQ*SFIVCLVVVKVV**GS*FPRMRIS*LSQQVFQTALISQEGTLSLILQGVQCQGK*IYLMSTCPSKIFQVLMCCSRTHTK  6878

Range 5: 6322 to 6876 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
313.1 bits(677) 0.0 176/185(95%) 0/185(0%) Plus/Plus
Query       84  GADMHC*GDG*PGEMY*QLCDRGFLCVPAGRAIH*NXXXXXXXXXXXXC*ILGQEQA*DEMLNFRPI*SD*LGLKYLALFEYYE*FXXXXXXXXXCRSFQCA*IXXXXXXCAW*W*K*FNKGANFRG*KLHSFHSRCSRQP*SHRKVH*ALFSRVCSARESEYT**VLVXXXXXXXXCAVLGPIP  638
                GADMHC*GDG*PGE+Y*QLC RG LC+PAGRAIH*NDDRGRSGG L LC*ILGQEQA*DEMLNFRPI*SD*LGLKYLALFEYYE*FS*SIVSI*VCR FQCA*ISSSHS*CAW*W*K*FNKGANFRG*+ HSFHSRCSRQP*SHRKVH*ALFSRVCSARESEYT**VLVRPRFFRF*CAVLGPIP
Subject   6322  GADMHC*GDG*PGELY*QLCYRGLLCIPAGRAIH*NDDRGRSGGPLQLC*ILGQEQA*DEMLNFRPI*SD*LGLKYLALFEYYE*FS*SIVSI*VCRCFQCA*ISSSHS*CAW*W*K*FNKGANFRG*EFHSFHSRCSRQP*SHRKVH*ALFSRVCSARESEYT**VLVRPRFFRF*CAVLGPIP  6876

Range 6: 6460 to 6657 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
148.2 bits(317) 0.0 66/66(100%) 0/66(0%) Minus/Minus
Query      222  GTL*MTTGNLSTLKTPTNSNADNALTKLFIILK*CQILKA*SIASNRPEIEHLILCLFLTKNLTQL  419
                GTL*MTTGNLSTLKTPTNSNADNALTKLFIILK*CQILKA*SIASNRPEIEHLILCLFLTKNLTQL
Subject   6460  GTL*MTTGNLSTLKTPTNSNADNALTKLFIILK*CQILKA*SIASNRPEIEHLILCLFLTKNLTQL  6657

Range 7: 6706 to 6876 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
142.7 bits(305) 0.0 57/57(100%) 0/57(0%) Minus/Minus
Query      468  WYGSENSTSKPEKSWTDKYSSSIFTFPGTAHPGE*GLMYLPVRLGLSGTPAVKAMKF  638
                WYGSENSTSKPEKSWTDKYSSSIFTFPGTAHPGE*GLMYLPVRLGLSGTPAVKAMKF
Subject   6706  WYGSENSTSKPEKSWTDKYSSSIFTFPGTAHPGE*GLMYLPVRLGLSGTPAVKAMKF  6876

Range 8: 6322 to 6405 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.9 bits(120) 0.0 27/28(96%) 0/28(0%) Minus/Minus
Query       84  RYA*ETSIA*LSIHFSRLPISLAMHIRS  167
                RYA*ETSIA*LSI FSRLPISLAMHIRS
Subject   6322  RYA*ETSIA*LSIQFSRLPISLAMHIRS  6405

Grapevine rupestris stem pitting associated virus isolate GRSPaV GG, complete genome

Sequence ID: JQ922417.1 Length: 8758 Number of Matches: 8

Range 1: 6325 to 6885 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
439.1 bits(952) 0.0 184/187(98%) 0/187(0%) Plus/Plus
Query       79  VGERICIAREMGNLEKCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHYLSIMNNLVKALSAFEFVGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQ  639
                + ERICIAREMGNLE CIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHYLSIMNNLVKALSAFEFVGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQ
Subject   6325  IWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHYLSIMNNLVKALSAFEFVGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQ  6885

Range 2: 6325 to 6885 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
413.5 bits(896) 0.0 179/187(96%) 0/187(0%) Minus/Minus
Query       79  LVWVREQHIKT*KILDGQVLIKYIHFPWHCTPWRIRLNVPSCEIRAVWNTCCESYEVFILGN*LPYXXXXXXXXXTMNDYWKFKHTENSYKLKC*QCFN*IIHNTQIMPNT*GLINRFK*A*N*ASHLMLVPDQESNTIIMSLHFFLGHHFNG*LSQPVRIGNLYRIIVNTFLQVTHLPSNAYPLPD  639
                LVWVREQHIKT*KILDGQVLIKYIHFPWHCTPWRIRLNVPSCEIRAVWNTCCESY++ ILGN*LPY*TTFTTTRHTMNDYWKFKHTEN+YKLKC*QCFN*IIHNTQIMPNT*GLINRFK*A*N*ASHLMLVPDQESNTIIM LHFFLGHHFNG*LSQPV IG+LYRIIVNT LQVTHLPSNAYPLPD
Subject   6325  LVWVREQHIKT*KILDGQVLIKYIHFPWHCTPWRIRLNVPSCEIRAVWNTCCESYKILILGN*LPY*TTFTTTRHTMNDYWKFKHTENTYKLKC*QCFN*IIHNTQIMPNT*GLINRFK*A*N*ASHLMLVPDQESNTIIMGLHFFLGHHFNG*LSQPVCIGDLYRIIVNTILQVTHLPSNAYPLPD  6885

Range 3: 6323 to 6886 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
392.8 bits(851) 0.0 180/188(96%) 0/188(0%) Minus/Minus
Query       77  FGMGPRTAHQNLKNLGRTSTHQVYSLSLALHTLENKA*CTFL*D*GCLEHLL*KL*SFHPRKLAPLLNYFYHYQAHYE*LLEI*AH*KXXXXXXXXXXXLNYS*YSNNAKYLRPNQSLQIGLKLSISSYACS*PRI*HNYNEPPLLPRSSFQWIALPAGTHRKPLSHNCQYISPGYPSP*QCISAPRL  640
                FGMGPRTAHQNLKNLGRTSTHQVYSLSLALHTLENKA*CTFL*D*GCLEHLL*KL*+ HPRKLAPLLNYFYHYQAHYE*LLEI*AH*K LQTQMLTML*LNYS*YSNNAKYLRPNQSLQIGLKLSISSYACS*PRI*HNYN PPLLPRSSFQWIALPAG HR+PLSHNCQY SP YPSP*QCISAPRL
Subject   6323  FGMGPRTAHQNLKNLGRTSTHQVYSLSLALHTLENKA*CTFL*D*GCLEHLL*KL*NSHPRKLAPLLNYFYHYQAHYE*LLEI*AH*KHLQTQMLTML*LNYS*YSNNAKYLRPNQSLQIGLKLSISSYACS*PRI*HNYNGPPLLPRSSFQWIALPAGMHRRPLSHNCQYNSPSYPSP*QCISAPRL  6886

Range 4: 6326 to 6886 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
379.1 bits(821) 0.0 179/187(96%) 0/187(0%) Plus/Plus
Query       80  SGSGYALLGRWVTWRNVLTIMR*RFPMRTGWESYPLK**PRKKWRLIIIVLDSWSGTSIR*DAQFQAYLKRLIRP*VFGII*VL*II*LKHCQHLSL*EFSVCLNFQ*SFIVCLXXXXXXXXGS*FPRMKTS*LSQQVFQTALISQEGTLSLILQGVQCQGK*IYLMSTCPSKIFQVLMCCSRTHTK  640
                SGSGYALLGRWVTWR VLTIMR*R PM TGWESYPLK**PRKKWR IIIVLDSWSGTSIR*DAQFQAYLKRLIRP*VFGII*VL*II*LKHCQHLSL* FSVCLNFQ*SFIVCLVVVKVV**GS*FPRM+  *LSQQVFQTALISQEGTLSLILQGVQCQGK*IYLMSTCPSKIFQVLMCCSRTHTK
Subject   6326  SGSGYALLGRWVTWRIVLTIMR*RSPMHTGWESYPLK**PRKKWRPIIIVLDSWSGTSIR*DAQFQAYLKRLIRP*VFGII*VL*II*LKHCQHLSL*VFSVCLNFQ*SFIVCLVVVKVV**GS*FPRMRIL*LSQQVFQTALISQEGTLSLILQGVQCQGK*IYLMSTCPSKIFQVLMCCSRTHTK  6886

Range 5: 6330 to 6884 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
308.5 bits(667) 0.0 176/185(95%) 0/185(0%) Plus/Plus
Query       84  GADMHC*GDG*PGEMY*QLCDRGFLCVPAGRAIH*NXXXXXXXXXXXXC*ILGQEQA*DEMLNFRPI*SD*LGLKYLALFEYYE*FXXXXXXXXXCRSFQCA*IXXXXXXCAW*W*K*FNKGANFRG*KLHSFHSRCSRQP*SHRKVH*ALFSRVCSARESEYT**VLVXXXXXXXXCAVLGPIP  638
                GADMHC*GDG* GE+Y*QLCDRG LC+PAGRAIH*NDDRGRSGG L*LC*ILGQEQA*DEMLNFRPI*SD*LGLKYLALFEYYE*FS*SIVSI*VCR FQCA*ISSSHS*CAW*W*K*FNKGANFRG*+ +SFHSRCSRQP*SHRKVH*ALFSRVCSARESEYT**VLVRPRFFRF*CAVLGPIP
Subject   6330  GADMHC*GDG*LGELY*QLCDRGLLCIPAGRAIH*NDDRGRSGGPL*LC*ILGQEQA*DEMLNFRPI*SD*LGLKYLALFEYYE*FS*SIVSI*VCRCFQCA*ISSSHS*CAW*W*K*FNKGANFRG*EFYSFHSRCSRQP*SHRKVH*ALFSRVCSARESEYT**VLVRPRFFRF*CAVLGPIP  6884

Range 6: 6468 to 6665 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
148.2 bits(317) 0.0 66/66(100%) 0/66(0%) Minus/Minus
Query      222  GTL*MTTGNLSTLKTPTNSNADNALTKLFIILK*CQILKA*SIASNRPEIEHLILCLFLTKNLTQL  419
                GTL*MTTGNLSTLKTPTNSNADNALTKLFIILK*CQILKA*SIASNRPEIEHLILCLFLTKNLTQL
Subject   6468  GTL*MTTGNLSTLKTPTNSNADNALTKLFIILK*CQILKA*SIASNRPEIEHLILCLFLTKNLTQL  6665

Range 7: 6714 to 6884 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
140.8 bits(301) 0.0 56/57(98%) 0/57(0%) Minus/Minus
Query      468  WYGSENSTSKPEKSWTDKYSSSIFTFPGTAHPGE*GLMYLPVRLGLSGTPAVKAMKF  638
                WYGSENSTSKPEKSWTDKYSSSIFTFPGTAHPGE*GLMYLPVRLGLSGTPAVKA+KF
Subject   6714  WYGSENSTSKPEKSWTDKYSSSIFTFPGTAHPGE*GLMYLPVRLGLSGTPAVKAIKF  6884

Range 8: 6330 to 6413 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.5 bits(117) 0.0 26/28(93%) 0/28(0%) Minus/Minus
Query       84  RYA*ETSIA*LSIHFSRLPISLAMHIRS  167
                RYA*ETSIA*LSI FS+LPISLAMHIRS
Subject   6330  RYA*ETSIA*LSIQFSKLPISLAMHIRS  6413

Grapevine rupestris stem pitting associated virus complete genome, isolate PG, genomic RNA

Sequence ID: HE591388.1 Length: 8725 Number of Matches: 8

Range 1: 6325 to 6885 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
438.7 bits(951) 0.0 183/187(98%) 0/187(0%) Plus/Plus
Query       79  VGERICIAREMGNLEKCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHYLSIMNNLVKALSAFEFVGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQ  639
                + ERICIAREMGNLE CIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHYLSIMNNLVKALSAFEFVGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLS+QDFSGFDVLFSDPYQ
Subject   6325  IWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHYLSIMNNLVKALSAFEFVGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSIQDFSGFDVLFSDPYQ  6885

Range 2: 6325 to 6885 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
411.6 bits(892) 0.0 177/187(95%) 0/187(0%) Minus/Minus
Query       79  LVWVREQHIKT*KILDGQVLIKYIHFPWHCTPWRIRLNVPSCEIRAVWNTCCESYEVFILGN*LPYXXXXXXXXXTMNDYWKFKHTENSYKLKC*QCFN*IIHNTQIMPNT*GLINRFK*A*N*ASHLMLVPDQESNTIIMSLHFFLGHHFNG*LSQPVRIGNLYRIIVNTFLQVTHLPSNAYPLPD  639
                LVWVREQHIKT*KILDGQVLIKY++FPWHCTPWRIRLNVPSCEIRAVWNTCCESYE+ ILGN*LPY*TTFTTTRHTMNDYWKFKHTEN+YKLKC*QCFN*IIHNTQIMPNT*GLINRFK*A*N*ASHLMLVPDQESNTI+M LHFFLGHHFNG*LSQPV IG+LYRIIVNT LQVTHLPSNAYPLPD
Subject   6325  LVWVREQHIKT*KILDGQVLIKYVYFPWHCTPWRIRLNVPSCEIRAVWNTCCESYEILILGN*LPY*TTFTTTRHTMNDYWKFKHTENTYKLKC*QCFN*IIHNTQIMPNT*GLINRFK*A*N*ASHLMLVPDQESNTIVMGLHFFLGHHFNG*LSQPVCIGDLYRIIVNTILQVTHLPSNAYPLPD  6885

Range 3: 6323 to 6886 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
380.9 bits(825) 0.0 177/188(94%) 0/188(0%) Minus/Minus
Query       77  FGMGPRTAHQNLKNLGRTSTHQVYSLSLALHTLENKA*CTFL*D*GCLEHLL*KL*SFHPRKLAPLLNYFYHYQAHYE*LLEI*AH*KXXXXXXXXXXXLNYS*YSNNAKYLRPNQSLQIGLKLSISSYACS*PRI*HNYNEPPLLPRSSFQWIALPAGTHRKPLSHNCQYISPGYPSP*QCISAPRL  640
                FGMGPRTAHQNLKNLG TSTHQV  LSLALHTLENKA*CTFL*D*GCLEHLL*KL*+ HPRKLAPLLNYFYHYQAHYE*LLEI*AH*K LQTQMLTML*LNYS*YSNNAKYLRPNQSLQIGLKLSISSYACS*PRI*HN N PPLLPRSSFQWIALPAG HR+PLSHNCQY SPGYPSP*QCISAPRL
Subject   6323  FGMGPRTAHQNLKNLGWTSTHQVCLLSLALHTLENKA*CTFL*D*GCLEHLL*KL*NSHPRKLAPLLNYFYHYQAHYE*LLEI*AH*KHLQTQMLTML*LNYS*YSNNAKYLRPNQSLQIGLKLSISSYACS*PRI*HNCNGPPLLPRSSFQWIALPAGMHRRPLSHNCQYNSPGYPSP*QCISAPRL  6886

Range 4: 6326 to 6886 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
377.3 bits(817) 0.0 178/187(95%) 0/187(0%) Plus/Plus
Query       80  SGSGYALLGRWVTWRNVLTIMR*RFPMRTGWESYPLK**PRKKWRLIIIVLDSWSGTSIR*DAQFQAYLKRLIRP*VFGII*VL*II*LKHCQHLSL*EFSVCLNFQ*SFIVCLXXXXXXXXGS*FPRMKTS*LSQQVFQTALISQEGTLSLILQGVQCQGK*IYLMSTCPSKIFQVLMCCSRTHTK  640
                SGSGYALLGRWVTWR VLTIMR*R PM TGWESYPLK**PRKKWR I IVLDSWSGTSIR*DAQFQAYLKRLIRP*VFGII*VL*II*LKHCQHLSL* FSVCLNFQ*SFIVCLVVVKVV**GS*FPRM+ S*LSQQVFQTALISQEGTLSLILQGVQCQGK* YLMSTCPSKIFQVLMCCSRTHTK
Subject   6326  SGSGYALLGRWVTWRIVLTIMR*RSPMHTGWESYPLK**PRKKWRPITIVLDSWSGTSIR*DAQFQAYLKRLIRP*VFGII*VL*II*LKHCQHLSL*VFSVCLNFQ*SFIVCLVVVKVV**GS*FPRMRIS*LSQQVFQTALISQEGTLSLILQGVQCQGK*TYLMSTCPSKIFQVLMCCSRTHTK  6886

Range 5: 6330 to 6884 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
313.1 bits(677) 0.0 174/185(94%) 0/185(0%) Plus/Plus
Query       84  GADMHC*GDG*PGEMY*QLCDRGFLCVPAGRAIH*NXXXXXXXXXXXXC*ILGQEQA*DEMLNFRPI*SD*LGLKYLALFEYYE*FXXXXXXXXXCRSFQCA*IXXXXXXCAW*W*K*FNKGANFRG*KLHSFHSRCSRQP*SHRKVH*ALFSRVCSARESEYT**VLVXXXXXXXXCAVLGPIP  638
                GADMHC*GDG*PGE+Y*QLCDRG LC+PAGRAIH*NDDRGRSGG L LC*ILGQEQA*DEMLNFRPI*SD*LGLKYLALFEYYE*FS*SIVSI*VCR FQCA*ISSSHS*CAW*W*K*FNKGANFRG*+ HSFHSRCSRQP*SHRKVH*ALFSRVCSARES++T**VLV PRFFRF*CAVLGPIP
Subject   6330  GADMHC*GDG*PGELY*QLCDRGLLCIPAGRAIH*NDDRGRSGGPLQLC*ILGQEQA*DEMLNFRPI*SD*LGLKYLALFEYYE*FS*SIVSI*VCRCFQCA*ISSSHS*CAW*W*K*FNKGANFRG*EFHSFHSRCSRQP*SHRKVH*ALFSRVCSARESKHT**VLVHPRFFRF*CAVLGPIP  6884

Range 6: 6468 to 6665 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
148.2 bits(317) 0.0 66/66(100%) 0/66(0%) Minus/Minus
Query      222  GTL*MTTGNLSTLKTPTNSNADNALTKLFIILK*CQILKA*SIASNRPEIEHLILCLFLTKNLTQL  419
                GTL*MTTGNLSTLKTPTNSNADNALTKLFIILK*CQILKA*SIASNRPEIEHLILCLFLTKNLTQL
Subject   6468  GTL*MTTGNLSTLKTPTNSNADNALTKLFIILK*CQILKA*SIASNRPEIEHLILCLFLTKNLTQL  6665

Range 7: 6714 to 6884 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
138.5 bits(296) 0.0 55/57(96%) 0/57(0%) Minus/Minus
Query      468  WYGSENSTSKPEKSWTDKYSSSIFTFPGTAHPGE*GLMYLPVRLGLSGTPAVKAMKF  638
                WYGSENSTSKPEKSW DKYSSS+FTFPGTAHPGE*GLMYLPVRLGLSGTPAVKAMKF
Subject   6714  WYGSENSTSKPEKSWMDKYSSSMFTFPGTAHPGE*GLMYLPVRLGLSGTPAVKAMKF  6884

Range 8: 6330 to 6413 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.9 bits(120) 0.0 27/28(96%) 0/28(0%) Minus/Minus
Query       84  RYA*ETSIA*LSIHFSRLPISLAMHIRS  167
                RYA*ETSIA*LSI FSRLPISLAMHIRS
Subject   6330  RYA*ETSIA*LSIQFSRLPISLAMHIRS  6413

Rupestris stem pitting associated virus 1, complete genome

Sequence ID: AF057136.1 Length: 8744 Number of Matches: 8

Range 1: 6326 to 6886 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
437.7 bits(949) 0.0 183/187(98%) 0/187(0%) Plus/Plus
Query       79  VGERICIAREMGNLEKCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHYLSIMNNLVKALSAFEFVGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQ  639
                + ERICIAREMGNLE CIDNYAIEVSYAYRLGEL+IEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHYLSIMNNLVKALSAFEFVGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQ
Subject   6326  IWERICIAREMGNLENCIDNYAIEVSYAYRLGELAIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHYLSIMNNLVKALSAFEFVGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQ  6886

Range 2: 6326 to 6886 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
403.4 bits(874) 0.0 176/187(94%) 0/187(0%) Minus/Minus
Query       79  LVWVREQHIKT*KILDGQVLIKYIHFPWHCTPWRIRLNVPSCEIRAVWNTCCESYEVFILGN*LPYXXXXXXXXXTMNDYWKFKHTENSYKLKC*QCFN*IIHNTQIMPNT*GLINRFK*A*N*ASHLMLVPDQESNTIIMSLHFFLGHHFNG*LSQPVRIGNLYRIIVNTFLQVTHLPSNAYPLPD  639
                LVWVREQHIKT*KILDGQVLIKYI+FPWHCTPWRIRLNVPSCEIRAVWNTCCESYE+ ILGN*LPY*TTFTTTRHTMNDYWKFKHTEN+YKLKC*QCFN*IIHNTQIMPNT*GLIN FK*A*N*ASHLMLVPDQESNTIIM LHFFLGHHFNG*LSQ V IG+LYRIIVNT LQV HLPSNAYPLPD
Subject   6326  LVWVREQHIKT*KILDGQVLIKYINFPWHCTPWRIRLNVPSCEIRAVWNTCCESYEILILGN*LPY*TTFTTTRHTMNDYWKFKHTENTYKLKC*QCFN*IIHNTQIMPNT*GLINSFK*A*N*ASHLMLVPDQESNTIIMGLHFFLGHHFNG*LSQSVCIGDLYRIIVNTILQVAHLPSNAYPLPD  6886

Range 3: 6324 to 6887 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
381.4 bits(826) 0.0 176/188(94%) 0/188(0%) Minus/Minus
Query       77  FGMGPRTAHQNLKNLGRTSTHQVYSLSLALHTLENKA*CTFL*D*GCLEHLL*KL*SFHPRKLAPLLNYFYHYQAHYE*LLEI*AH*KXXXXXXXXXXXLNYS*YSNNAKYLRPNQSLQIGLKLSISSYACS*PRI*HNYNEPPLLPRSSFQWIALPAGTHRKPLSHNCQYISPGYPSP*QCISAPRL  640
                FGMGPRTAHQNLKNLGRTSTHQVY LSLALHTLENKA*CTFL*D*GCLEHLL*KL*+ HPRKLAPLLNYFYHYQAHYE*LLEI*AH*K LQTQMLTML*LNYS*YSNNAKYLRPNQ LQIGLKLSISSYACS*PRI*HNYN PPLLPRSSFQW+ALP G HR+PLSHNCQY SPG PSP*QCISAPRL
Subject   6324  FGMGPRTAHQNLKNLGRTSTHQVY*LSLALHTLENKA*CTFL*D*GCLEHLL*KL*NSHPRKLAPLLNYFYHYQAHYE*LLEI*AH*KHLQTQMLTML*LNYS*YSNNAKYLRPNQ*LQIGLKLSISSYACS*PRI*HNYNGPPLLPRSSFQWLALPVGMHRRPLSHNCQYNSPGCPSP*QCISAPRL  6887

Range 4: 6327 to 6887 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
366.3 bits(793) 0.0 175/187(94%) 0/187(0%) Plus/Plus
Query       80  SGSGYALLGRWVTWRNVLTIMR*RFPMRTGWESYPLK**PRKKWRLIIIVLDSWSGTSIR*DAQFQAYLKRLIRP*VFGII*VL*II*LKHCQHLSL*EFSVCLNFQ*SFIVCLXXXXXXXXGS*FPRMKTS*LSQQVFQTALISQEGTLSLILQGVQCQGK*IYLMSTCPSKIFQVLMCCSRTHTK  640
                SGSGYALLGRW TWR VLTIMR*R PM T WES PLK**PRKKWR IIIVLDSWSGTSIR*DAQFQAYLK LIRP*VFGII*VL*II*LKHCQHLSL* FSVCLNFQ*SFIVCLVVVKVV**GS*FPRM+ S*LSQQVFQTALISQEGTLSLILQGVQCQGK IYLMSTCPSKIFQVLMCCSRTHTK
Subject   6327  SGSGYALLGRWATWRIVLTIMR*RSPMHTDWES*PLK**PRKKWRPIIIVLDSWSGTSIR*DAQFQAYLKLLIRP*VFGII*VL*II*LKHCQHLSL*VFSVCLNFQ*SFIVCLVVVKVV**GS*FPRMRIS*LSQQVFQTALISQEGTLSLILQGVQCQGKLIYLMSTCPSKIFQVLMCCSRTHTK  6887

Range 5: 6469 to 6666 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
148.2 bits(317) 0.0 66/66(100%) 0/66(0%) Minus/Minus
Query      222  GTL*MTTGNLSTLKTPTNSNADNALTKLFIILK*CQILKA*SIASNRPEIEHLILCLFLTKNLTQL  419
                GTL*MTTGNLSTLKTPTNSNADNALTKLFIILK*CQILKA*SIASNRPEIEHLILCLFLTKNLTQL
Subject   6469  GTL*MTTGNLSTLKTPTNSNADNALTKLFIILK*CQILKA*SIASNRPEIEHLILCLFLTKNLTQL  6666

Range 6: 6715 to 6885 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
139.9 bits(299) 0.0 56/57(98%) 0/57(0%) Minus/Minus
Query      468  WYGSENSTSKPEKSWTDKYSSSIFTFPGTAHPGE*GLMYLPVRLGLSGTPAVKAMKF  638
                WYGSENSTSKPEKSWTDKYSSSI TFPGTAHPGE*GLMYLPVRLGLSGTPAVKAMKF
Subject   6715  WYGSENSTSKPEKSWTDKYSSSILTFPGTAHPGE*GLMYLPVRLGLSGTPAVKAMKF  6885

Range 7: 6331 to 6414 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.9 bits(120) 0.0 27/28(96%) 0/28(0%) Minus/Minus
Query       84  RYA*ETSIA*LSIHFSRLPISLAMHIRS  167
                RYA*ETSIA*LSI FSRLPISLAMHIRS
Subject   6331  RYA*ETSIA*LSIQFSRLPISLAMHIRS  6414

Range 8: 6331 to 6885 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
300.7 bits(650) 0.0 173/185(94%) 0/185(0%) Plus/Plus
Query       84  GADMHC*GDG*PGEMY*QLCDRGFLCVPAGRAIH*NXXXXXXXXXXXXC*ILGQEQA*DEMLNFRPI*SD*LGLKYLALFEYYE*FXXXXXXXXXCRSFQCA*IXXXXXXCAW*W*K*FNKGANFRG*KLHSFHSRCSRQP*SHRKVH*ALFSRVCSARESEYT**VLVXXXXXXXXCAVLGPIP  638
                GADMHC*GDG PGE+Y*QLCDRG LC+P GRA H*NDDRGRSGG L*LC*ILGQEQA*DEMLNFRPI*S *LGLKYLALFEYYE*FS*SIVSI*VCR FQCA*ISSSHS*CAW*W*K*FNKGANFRG*+ HSFHSRCSRQP*SHRKVH*ALFSRVCSARES YT**VLVRPRFFRF*CAVLGPIP
Subject   6331  GADMHC*GDGQPGELY*QLCDRGLLCIPTGRASH*NDDRGRSGGPL*LC*ILGQEQA*DEMLNFRPI*SY*LGLKYLALFEYYE*FS*SIVSI*VCRCFQCA*ISSSHS*CAW*W*K*FNKGANFRG*EFHSFHSRCSRQP*SHRKVH*ALFSRVCSARES*YT**VLVRPRFFRF*CAVLGPIP  6885

Nucleotide Sequence (615 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 10 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
62
124
186
248
310
372
434
496
558
615

Descriptions

Alignments

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OB1

Sequence ID: AB277783.1 Length: 2876 Number of Matches: 10

Range 1: 587 to 1195 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
472.1 bits(1024) 0.0 195/203(96%) 0/203(0%) Minus/Plus
Query        6  KRICIAREMGNLENCIDNYAIEESYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFTAFTAGVPDTPNLSGRYIKPYSPGCAVKGRINILDEYLSVDDISGFDVLFSDPYQNISVPREAHFIKSKTCRF  614
                +RICIAREMGNLENCIDNYAIE SYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALS+WHGVIIMNNLVKALSTFEFVG+YSVLRFPVVVHSVPGSGKSSLIREL+TEDESF AFTAGVPDTPNLSGRYIKPYSPGCAVKG+INILDEYLSV DISGFDVLFSDPYQNISVPREAHFIKSKTCRF
Subject    587  ERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHGVIIMNNLVKALSTFEFVGIYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRF  1195

Range 2: 588 to 1199 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
389.2 bits(843) 0.0 169/204(83%) 0/204(0%) Plus/Minus
Query        2  RQICRSWTL*SEPPSEH*YFDMGQRIARQNQKCHQQTDTHQVCLSSLLQRNQESMA*CTSQKDWECQELRL*RL*NSRPQ**VLLSNYFYRYQEHYEQQLEI*AHYRHPQTQTWTKL*LSYS**SHHAKHLRPNL*LQTIQKLSISSCAYF*PRTAHSCSALQLLLHSSFQLTTRPTCRHRTPQLHNYQCSFPGYPFREQCKFS  613
                RQICRS TL*SEPP EH*YFDMGQ+I RQNQKCH QTDTHQVCLSS LQ NQESMA*CTSQ+ WEC+E R *RL*NSRPQ* VLL N FY YQE  EQQLEI*A Y++PQTQT TKL*LSYS**SHHAK+LRPNL*LQT QKLS SSC YF*  TAHSCS LQL LHSSFQLTTRP CRHR PQLH+YQCS PGYPF EQCKFS
Subject    588  RQICRSLTL*SEPPLEH*YFDMGQKITRQNQKCHLQTDTHQVCLSSPLQHNQESMA*CTSQRGWECRERRP*RL*NSRPQ*QVLLLNCFYHYQERCEQQLEI*ARYKYPQTQT*TKL*LSYS**SHHAKYLRPNL*LQTTQKLSTSSCVYF*LGTAHSCSVLQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFHEQCKFS  1199

Range 3: 719 to 1195 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
303.0 bits(655) 0.0 130/159(82%) 0/159(0%) Plus/Minus
Query        6  KSAGLGLYEVSLPRNTDILIWVRE*HVKTRNVINRQILIKYVYPPFYSATRRVWLDVPPRKIGSVRNSGCEGCETLVLSDEFSYQTTFTATRNTMNNNWKSEHTIDTHKLKRGQSFN*VIHNNHTMPNT*GLIYSFKQSRN*ASHLVLISNQEPHTVVV  482
                KSAGL LYEVSLP NTDILIWVR+*HVKTRNV  RQILIKYVY P YS TRRVWL+VPPR++GSV N+G +G ETLVLSD+FSY T FT TRN +NNNWKSEH I+THKLKR QSFN*VIHNNHTMPNT*GLIYSFKQ RN*A HLV ISN EPHTVVV
Subject    719  KSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYLPLYSTTRRVWLNVPPREVGSVGNAGRKGYETLVLSDKFSY*TAFTTTRNAVNNNWKSEHAINTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQPRN*APHLVFISN*EPHTVVV  1195

Range 4: 587 to 682 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.9 bits(144) 0.0 28/32(88%) 0/32(0%) Plus/Minus
Query      519  QLAQPVGIGLLNCIIINAVFQVTHFASNANSL  614
                QLAQPVGIG LNCI+INAV QVTHF SNANSL
Subject    587  QLAQPVGIGYLNCIVINAVLQVTHFTSNANSL  682

Range 5: 589 to 861 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
189.8 bits(408) 0.0 87/91(96%) 0/91(0%) Plus/Minus
Query      340  VDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTKNRTQL*CASTSSSFIISIDNSPNL*A*DSSIA*LSMQFSRLPISRAMQIL  612
                VDKALTKLFIIITPCQ LKA*SIASNNPEIEHLILCLFLT+NRTQL*CASTSSSFIISIDNSP+L*A*D+SIA*LSMQFSRLPISRAMQIL
Subject    589  VDKALTKLFIIITPCQILKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISRAMQIL  861

Range 6: 940 to 1200 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
181.1 bits(389) 0.0 80/87(92%) 0/87(0%) Plus/Minus
Query        1  SSNLQVLDFMK*ASLGTLIF*YGSENSTSKPEMSSTDRYSSSMFILPFTAQPGEYGLMYLPERLGVSGTPAVKAVKLSSSVMSSLIK  261
                S NLQV DFMK*ASLGTLIF*YGSEN+TSKPEMS TDRYSSSMFI PFTAQPGEYGLMYLPERLGVSGTPAVKA+KLSSSV SSLIK
Subject    940  SPNLQVFDFMK*ASLGTLIF*YGSENNTSKPEMSLTDRYSSSMFIFPFTAQPGEYGLMYLPERLGVSGTPAVKAMKLSSSVTSSLIK  1200

Range 7: 589 to 1200 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
330.1 bits(714) 0.0 168/204(82%) 0/204(0%) Minus/Plus
Query        1  ENLHCSRNG*PGKLH**LCN*GVLCLQVGRVVN*NDE*RRS*SALQLCAVLG*K*AQDEMLNFWIV*SYRLGLKCLAWCDYYE*LS*SFVHV*VCGCL*CAQIXXXXXXXSW*R*K*FDKRTHH*GREFXXXXXXXXXXXXSFWEVHQAILSWLRCKREDKHT**VSVC**HFWF*RAIL*PISKYQCSEGGSLHKVQDLQI*R  612
                ENLHCS NG*PG+LH**LCN*G+LCLQ GRVVN*NDE*R S*S LQLCAV  *K* QDE+LNFW+V*SYRLGLK LAWCDYYE*LS*SFV+V*VCG L* AQISSCCS  SW* *K F+KRT H*GREFHSL+ R S HSQ  WEVH AILSWL CK EDKHT**VSVC *HFWF*R I *PISKYQCS+GGSLHKV+DLQI R
Subject    589  ENLHCS*NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*STLQLCAVPS*K*TQDEVLNFWVV*SYRLGLKYLAWCDYYE*LS*SFVYV*VCGYL*RAQISSCCSQRSW*W*KQFNKRTCH*GREFHSLYGRRSRHSQPLWEVH*AILSWLCCKGEDKHT**VSVCK*HFWF*RVIF*PISKYQCSKGGSLHKVKDLQIWR  1200

Range 8: 948 to 1196 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
142.2 bits(304) 0.0 66/83(80%) 0/83(0%) Minus/Plus
Query        5  ENSSLRTRVSQPSQPEFLTLPIFLGGTSSHTLLVAL*KGG*TYLMSICLLMTFLVLTCYSLTHIKISVFRGRLTS*SPRPADL  253
                EN SLRTRVS P +P F TLP  LGGT SHTLLV L*+G *TYLMSICL +TFLVLTCY LTHIKISVF+GRLTS*S RPADL
Subject    948  ENLSLRTRVS*PLRPAFPTLPTSLGGTLSHTLLVVL*RGR*TYLMSICL*VTFLVLTCYFLTHIKISVFQGRLTS*SQRPADL  1196

Range 9: 720 to 911 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
121.1 bits(258) 0.0 57/64(89%) 0/64(0%) Minus/Plus
Query      290  TTTVCGSWLEISTR*DAQFLDCLKL*IRP*VFGMV*LL*IT*LKLCPRLSLWVSIVCSDFQLLF  481
                TTTVCGS LEI+TR* AQFL CLKL*IRP*VFGMV*LL*IT*LKLC RLSLWV I CSDFQLLF
Subject    720  TTTVCGS*LEINTR*GAQFLGCLKL*IRP*VFGMV*LL*IT*LKLCLRLSLWVFIACSDFQLLF  911

Range 10: 588 to 686 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
77.1 bits(162) 0.0 29/33(88%) 0/33(0%) Minus/Plus
Query      515  REFALLAKWVTWKTALIIMQLRSPMPTGWASCQ  613
                REFALL KWVTW+TALI MQLR PMPTGWASCQ
Subject    588  REFALLVKWVTWRTALITMQLRYPMPTGWASCQ  686

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 10

Range 1: 6331 to 6939 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
470.3 bits(1020) 0.0 195/203(96%) 0/203(0%) Minus/Plus
Query        6  KRICIAREMGNLENCIDNYAIEESYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFTAFTAGVPDTPNLSGRYIKPYSPGCAVKGRINILDEYLSVDDISGFDVLFSDPYQNISVPREAHFIKSKTCRF  614
                +RICIAREMGNLENCIDNYAIE SYAYRLGEL+IEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIREL+TEDE+F AFTAGVPDTPNLSGRYIKPYSPGCAVKG+INILDEYLSV DISGFDVLFSDPYQNISVPREAHFIKSKTCRF
Subject   6331  ERICIAREMGNLENCIDNYAIEVSYAYRLGELAIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELVTEDENFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRF  6939

Range 2: 6332 to 6943 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
403.8 bits(875) 0.0 174/204(85%) 0/204(0%) Plus/Minus
Query        2  RQICRSWTL*SEPPSEH*YFDMGQRIARQNQKCHQQTDTHQVCLSSLLQRNQESMA*CTSQKDWECQELRL*RL*NSRPQ**VLLSNYFYRYQEHYEQQLEI*AHYRHPQTQTWTKL*LSYS**SHHAKHLRPNL*LQTIQKLSISSCAYF*PRTAHSCSALQLLLHSSFQLTTRPTCRHRTPQLHNYQCSFPGYPFREQCKFS  613
                RQICRS TL*SEPP EH*YFDMGQ+I RQNQKCH QTDTHQVCLSSLLQ NQESMA*CTSQ+ W CQE R *RL*NSRPQ* VLL NYFY YQE YEQQLEI*A Y+HPQTQT TKL*LSYS**SHHAKHLRPNL*LQT QKLS SSCAYF*  TAHSCS LQL LHSSFQL TRP CRHR PQLH+YQCS PGYPF EQCKFS
Subject   6332  RQICRSLTL*SEPPLEH*YFDMGQKITRQNQKCHLQTDTHQVCLSSLLQHNQESMA*CTSQRGWVCQERRP*RL*NSRPQ*QVLLLNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*LGTAHSCSVLQLPLHSSFQLPTRPACRHRIPQLHSYQCSSPGYPFHEQCKFS  6943

Range 3: 6331 to 6939 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
371.8 bits(805) 0.0 171/203(84%) 0/203(0%) Plus/Minus
Query        6  KSAGLGLYEVSLPRNTDILIWVRE*HVKTRNVINRQILIKYVYPPFYSATRRVWLDVPPRKIGSVRNSGCEGCETLVLSDEFSYQTTFTATRNTMNNNWKSEHTIDTHKLKRGQSFN*VIHNNHTMPNT*GLIYSFKQSRN*ASHLVLISNQEPHTVVVRXXXXXXXXXXXQLAQPVGIGLLNCIIINAVFQVTHFASNANSL  614
                KSAGL LYEVSLP NTDILIWVR+*HVKTRNV  RQILIKYVY PFYS TRRVWLDVPPR++G VRN+G +G E LVLSD+FSY TTFT TRN MNNNWKSEH I+THKLKR QSFN*VIHNNHTMPNT*GLIYSFKQ RN*A HLVLISN EPHTVVV FNF FIHHFN QLAQPVGIG LNCI+INAV QVTHF SNANSL
Subject   6331  KSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYLPFYSTTRRVWLDVPPREVGCVRNAGRKGYEILVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQPRN*APHLVLISN*EPHTVVVCFNFLFIHHFNCQLAQPVGIGYLNCIVINAVLQVTHFTSNANSL  6939

Range 4: 6333 to 6605 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
188.9 bits(406) 0.0 87/91(96%) 0/91(0%) Plus/Minus
Query      340  VDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTKNRTQL*CASTSSSFIISIDNSPNL*A*DSSIA*LSMQFSRLPISRAMQIL  612
                VDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLT+NRTQL*CASTSSSFIISI NSP+L*A*D+SIA*LSMQFSRLPISRAMQIL
Subject   6333  VDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIANSPSL*A*DTSIA*LSMQFSRLPISRAMQIL  6605

Range 5: 6684 to 6944 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
179.3 bits(385) 0.0 79/87(91%) 0/87(0%) Plus/Minus
Query        1  SSNLQVLDFMK*ASLGTLIF*YGSENSTSKPEMSSTDRYSSSMFILPFTAQPGEYGLMYLPERLGVSGTPAVKAVKLSSSVMSSLIK  261
                S NLQV DFMK*ASLGTLIF*YGSEN+TSKPEMS TDRYSSSMFI PFTAQPGEYGLMYLPERLGVSGTPAVKA+K SSSV SSLIK
Subject   6684  SPNLQVFDFMK*ASLGTLIF*YGSENNTSKPEMSLTDRYSSSMFIFPFTAQPGEYGLMYLPERLGVSGTPAVKAMKFSSSVTSSLIK  6944

Range 6: 6333 to 6719 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
227.0 bits(489) 0.0 112/129(87%) 0/129(0%) Minus/Plus
Query      226  ENLHCSRNG*PGKLH**LCN*GVLCLQVGRVVN*NDE*RRS*SALQLCAVLG*K*AQDEMLNFWIV*SYRLGLKCLAWCDYYE*LS*SFVHV*VCGCL*CAQIXXXXXXXSW*R*K*FDKRTHH*GREF  612
                ENLHCS NG*PG+LH**LCN*G+LCLQ GRV N*NDE*R S*S LQLCAV  *K*AQDE+LNFW+V*SYRLGLKCLAWCDYYE*LS*SFV+V*VCGCL* AQISSCCS* SW* *K*F+KRT H*GREF
Subject   6333  ENLHCS*NG*PGELH**LCN*GILCLQAGRVGN*NDE*RGS*STLQLCAVPS*K*AQDEVLNFWVV*SYRLGLKCLAWCDYYE*LS*SFVYV*VCGCL*RAQISSCCS*RSW*W*K*FNKRTCH*GREF  6719

Range 7: 6762 to 6944 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.9 bits(275) 0.0 54/61(89%) 0/61(0%) Minus/Plus
Query        1  WEVHQAILSWLRCKREDKHT**VSVC**HFWF*RAIL*PISKYQCSEGGSLHKVQDLQI*R  183
                WEVHQAILSWL CKREDKHT**VSVC *HFWF*R I *PISKYQCS+GGSLHKV+DLQI R
Subject   6762  WEVHQAILSWLCCKREDKHT**VSVCK*HFWF*RVIF*PISKYQCSKGGSLHKVKDLQIWR  6944

Range 8: 6692 to 6940 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
145.9 bits(312) 0.0 67/83(81%) 0/83(0%) Minus/Plus
Query        5  ENSSLRTRVSQPSQPEFLTLPIFLGGTSSHTLLVAL*KGG*TYLMSICLLMTFLVLTCYSLTHIKISVFRGRLTS*SPRPADL  253
                EN SLRTR+S P +P FLT P  LGGTSSHTLLV L*KG *TYLMSICL +TFLVLTCY LTHIKISVF+GRLTS*S RPADL
Subject   6692  ENLSLRTRIS*PLRPAFLTHPTSLGGTSSHTLLVVL*KGR*TYLMSICL*VTFLVLTCYFLTHIKISVFQGRLTS*SQRPADL  6940

Range 9: 6464 to 6658 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
124.3 bits(265) 0.0 59/65(91%) 0/65(0%) Minus/Plus
Query      287  TTTVCGSWLEISTR*DAQFLDCLKL*IRP*VFGMV*LL*IT*LKLCPRLSLWVSIVCSDFQLLFI  481
                TTTVCGS LEISTR* AQFL CLKL*IRP*VFGMV*LL*IT*LKLC RLSLWV I CSDFQLLFI
Subject   6464  TTTVCGS*LEISTR*GAQFLGCLKL*IRP*VFGMV*LL*IT*LKLCLRLSLWVFIACSDFQLLFI  6658

Range 10: 6332 to 6430 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.1 bits(151) 0.0 28/33(85%) 0/33(0%) Minus/Plus
Query      515  REFALLAKWVTWKTALIIMQLRSPMPTGWASCQ  613
                REFALL KWVTW+TALI MQLR PMPTGWAS Q
Subject   6332  REFALLVKWVTWRTALITMQLRYPMPTGWASWQ  6430

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 9

Range 1: 6331 to 6939 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
461.1 bits(1000) 0.0 194/203(96%) 0/203(0%) Minus/Plus
Query        6  KRICIAREMGNLENCIDNYAIEESYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFTAFTAGVPDTPNLSGRYIKPYSPGCAVKGRINILDEYLSVDDISGFDVLFSDPYQNISVPREAHFIKSKTCRF  614
                +RICIAREMGNLENCIDNYAIE SYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWH  IIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESF AFTAGVPDTPNLSGRYIKPYSPGCAVKG+INILDEYLSV+D S FDVLFSDPYQNISVPREAHFIKSKTCRF
Subject   6331  ERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHY*IIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVNDFSDFDVLFSDPYQNISVPREAHFIKSKTCRF  6939

Range 2: 6332 to 6940 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
402.0 bits(871) 0.0 175/203(86%) 0/203(0%) Plus/Minus
Query        5  QICRSWTL*SEPPSEH*YFDMGQRIARQNQKCHQQTDTHQVCLSSLLQRNQESMA*CTSQKDWECQELRL*RL*NSRPQ**VLLSNYFYRYQEHYEQQLEI*AHYRHPQTQTWTKL*LSYS**SHHAKHLRPNL*LQTIQKLSISSCAYF*PRTAHSCSALQLLLHSSFQLTTRPTCRHRTPQLHNYQCSFPGYPFREQCKFS  613
                Q CRS TL*SEPP EH*YFDMGQRI RQNQK H QTDTH+VCLSSLLQ NQESMA*CTSQK  EC+E R *+L*NSR Q** LLSNYFY YQE YEQQLEI*A Y+HPQTQT TKL*LSYS**S++AKHLRPNL*LQTIQKLSISSCAYF*P TAHSCSALQL LHSSFQLTTRPTCRHRTPQLHNYQC+FPG PF EQCKFS
Subject   6332  QTCRSLTL*SEPPLEH*YFDMGQRITRQNQKSHSQTDTHRVCLSSLLQHNQESMA*CTSQKGLECRERRP*KL*NSRLQ**ALLSNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SNNAKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQLPLHSSFQLTTRPTCRHRTPQLHNYQCNFPGCPFHEQCKFS  6940

Range 3: 6331 to 6939 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
368.6 bits(798) 0.0 172/203(85%) 0/203(0%) Plus/Minus
Query        6  KSAGLGLYEVSLPRNTDILIWVRE*HVKTRNVINRQILIKYVYPPFYSATRRVWLDVPPRKIGSVRNSGCEGCETLVLSDEFSYQTTFTATRNTMNNNWKSEHTIDTHKLKRGQSFN*VIHNNHTMPNT*GLIYSFKQSRN*ASHLVLISNQEPHTVVVRXXXXXXXXXXXQLAQPVGIGLLNCIIINAVFQVTHFASNANSL  614
                K AGL LYEVSLP NTDILIWVRE*HVK R VI+RQILI+YVY PFYS TRRVWLDVPPRK+ SV N+G E  ETLV S+E SYQTTFT TRN MNNNWKSEH I+THKLKR QSFN*VIHNN  MPNT*GLIYSFKQSRN*ASHLVLISNQEPHTVVVRFNF FIHHFN*QLAQPVGIG LNCIIINA+FQV HF SNANSL
Subject   6331  KPAGL*LYEVSLPWNTDILIWVRE*HVKIRKVIHRQILIEYVYLPFYSTTRRVWLDVPPRKVWSVGNAGRESYETLVFSNELSYQTTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNLIMPNT*GLIYSFKQSRN*ASHLVLISNQEPHTVVVRFNFLFIHHFN*QLAQPVGIGHLNCIIINAIFQVAHFTSNANSL  6939

Range 4: 6333 to 6605 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
185.7 bits(399) 0.0 87/91(96%) 0/91(0%) Plus/Minus
Query      340  VDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTKNRTQL*CASTSSSFIISIDNSPNL*A*DSSIA*LSMQFSRLPISRAMQIL  612
                VDKALTKLFIII  CQTLKA*SIASNNPEIEHLILCLFLT+NRTQL*CASTSSSFIISIDNSPNL*A*D+SIA*LSMQFSRLPISRAMQIL
Subject   6333  VDKALTKLFIII**CQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSMQFSRLPISRAMQIL  6605

Range 5: 6684 to 6938 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
174.3 bits(374) 0.0 77/85(91%) 0/85(0%) Plus/Minus
Query        7  NLQVLDFMK*ASLGTLIF*YGSENSTSKPEMSSTDRYSSSMFILPFTAQPGEYGLMYLPERLGVSGTPAVKAVKLSSSVMSSLIK  261
                NLQV DFMK*ASLGTLIF*YGSEN+TSK E S TDRYSSSMFI PFTAQPGEYGLMYLPER GVSGTPAVKA+KLSSSVMSSLIK
Subject   6684  NLQVFDFMK*ASLGTLIF*YGSENNTSKSEKSFTDRYSSSMFIFPFTAQPGEYGLMYLPERFGVSGTPAVKAMKLSSSVMSSLIK  6938

Range 6: 6333 to 6938 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
336.5 bits(728) 0.0 174/202(86%) 0/202(0%) Minus/Plus
Query        7  ENLHCSRNG*PGKLH**LCN*GVLCLQVGRVVN*NDE*RRS*SALQLCAVLG*K*AQDEMLNFWIV*SYRLGLKCLAWCDYYE*LS*SFVHV*VCGCL*CAQIXXXXXXXSW*R*K*FDKRTHH*GREFXXXXXXXXXXXXSFWEVHQAILSWLRCKREDKHT**VSVC**HFWF*RAIL*PISKYQCSEGGSLHKVQDLQI  612
                ENLHCS NG PGKLH**LCN*GVLCLQVGRVVN*NDE*R S*SALQLCAV G*K*AQDEMLNFWIV*SYRLGLKCLA  DYYE*LS*SFV+V*VCGCL* AQISSCCS* SW* *K*FDKR H+* REFHS H R S HS+ FWEVHQAILSWL CKREDKHT *VSVC * F F*R IL*PISKYQCS+GGSLHKV+DLQ+
Subject   6333  ENLHCS*NGQPGKLH**LCN*GVLCLQVGRVVN*NDE*RGS*SALQLCAVPG*K*AQDEMLNFWIV*SYRLGLKCLALLDYYE*LS*SFVYV*VCGCL*RAQISSCCS*RSW*W*K*FDKRAHY*RREFHSFHGRRSRHSKPFWEVHQAILSWLCCKREDKHTR*VSVCE*LF*F*RVIL*PISKYQCSKGGSLHKVKDLQV  6938

Range 7: 6692 to 6940 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
139.0 bits(297) 0.0 65/83(78%) 0/83(0%) Minus/Plus
Query        5  ENSSLRTRVSQPSQPEFLTLPIFLGGTSSHTLLVAL*KGG*TYLMSICLLMTFLVLTCYSLTHIKISVFRGRLTS*SPRPADL  253
                E+S L+TRVS  S+P F TL  FLGGTSSHTLLV L*KG *TY MSICL MTFL+LTCYSLTHIKISVF+GRLTS*S RPA L
Subject   6692  ESSLLKTRVS*LSRPAFPTLQTFLGGTSSHTLLVVL*KGR*TYSMSICL*MTFLILTCYSLTHIKISVFQGRLTS*SQRPAGL  6940

Range 8: 6461 to 6658 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
135.3 bits(289) 0.0 60/66(91%) 0/66(0%) Minus/Plus
Query      287  RTTTVCGSWLEISTR*DAQFLDCLKL*IRP*VFGMV*LL*IT*LKLCPRLSLWVSIVCSDFQLLFI  484
                RTTTVCGSWLEISTR*DAQFLDCLKL*IRP*VFG++ LL*IT*LKLC RLSLWV I CSDFQLLFI
Subject   6461  RTTTVCGSWLEISTR*DAQFLDCLKL*IRP*VFGIIRLL*IT*LKLCLRLSLWVFIACSDFQLLFI  6658

Range 9: 6332 to 6430 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.7 bits(161) 0.0 29/33(88%) 0/33(0%) Minus/Plus
Query      515  REFALLAKWVTWKTALIIMQLRSPMPTGWASCQ  613
                REFALL KW TWK ALIIMQLR PMPTGWASCQ
Subject   6332  REFALLVKWATWKIALIIMQLRCPMPTGWASCQ  6430

Grapevine Rupestris stem pitting associated virus, complete genome

Sequence ID: AF026278.1 Length: 8725 Number of Matches: 11

Range 1: 6331 to 6939 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
445.1 bits(965) 0.0 181/203(89%) 0/203(0%) Minus/Plus
Query        6  KRICIAREMGNLENCIDNYAIEESYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFTAFTAGVPDTPNLSGRYIKPYSPGCAVKGRINILDEYLSVDDISGFDVLFSDPYQNISVPREAHFIKSKTCRF  614
                +RICIAREMGNLENCIDNYAIE SYAYRLGELSIEMM EEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALS+WH + IMNNLVKALSTFEFVGV+SVL+FPVV+HSVPGSGKSSLIRELI+EDE+F AFTAGVPD+PNL+GRYIKPYSPGCAV G++NILDEYLSV D SGFDVLFSDPYQNIS+P+EAHFIKSKTCRF
Subject   6331  ERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHYLSIMNNLVKALSTFEFVGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQNISIPKEAHFIKSKTCRF  6939

Range 2: 6336 to 6605 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
146.3 bits(313) 0.0 71/90(79%) 0/90(0%) Plus/Minus
Query      340  VDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTKNRTQL*CASTSSSFIISIDNSPNL*A*DSSIA*LSMQFSRLPISRAMQI  609
                VD ALTKLFII+  CQ LKA*SIASN PEIEHLILCLFLTKN TQL* ASTSSS IIS+D+SP+  A*++SIA*LS+QFSRLPIS AM I
Subject   6336  VDNALTKLFIILK*CQILKA*SIASNRPEIEHLILCLFLTKNLTQL*WASTSSSVIISMDSSPSRYA*ETSIA*LSIQFSRLPISLAMHI  6605

Range 3: 6684 to 6938 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
143.1 bits(306) 0.0 65/85(76%) 0/85(0%) Plus/Minus
Query        7  NLQVLDFMK*ASLGTLIF*YGSENSTSKPEMSSTDRYSSSMFILPFTAQPGEYGLMYLPERLGVSGTPAVKAVKLSSSVMSSLIK  261
                NLQV D MK ASLG L+F YGSENSTSKPE S TD+YSSSMF  P TA PGE GLMYLP RLG+SGTPAVKA+K SSS +SSLIK
Subject   6684  NLQVFDLMKCASLGMLMFWYGSENSTSKPEKSWTDKYSSSMFTFPGTAHPGE*GLMYLPVRLGLSGTPAVKAMKFSSSEISSLIK  6938

Range 4: 6463 to 6921 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
176.1 bits(378) 0.0 78/153(51%) 0/153(0%) Plus/Minus
Query       24  LYEVSLPRNTDILIWVRE*HVKTRNVINRQILIKYVYPPFYSATRRVWLDVPPRKIGSVRNSGCEGCETLVLSDEFSYQTTFTATRNTMNNNWKSEHTIDTHKLKRGQSFN*VIHNNHTMPNT*GLIYSFKQSRN*ASHLVLISNQEPHTVVV  482
                L E+ L RN D+L+WVRE H+KT  +++ Q+LIKYV+ P +    R+ L+VP  +I +V N+ CE  E L+L +   Y TTFT TR+TMN+ WK +HT +T+KLK  Q FN*+IHN   MPNT*GLI  FK + N*ASHL+L+ +QE +T+++
Subject   6463  LDEMCLFRNADVLVWVREQHIKT*KILDGQVLIKYVHFPRHCTPWRIRLNVPSCEIRAVWNTCCESYEILILGN*LPY*TTFTTTRHTMNDYWKFKHTENTYKLKC*QCFN*IIHNTQIMPNT*GLINRFK*A*N*ASHLMLVPDQESNTIIM  6921

Range 5: 6331 to 6423 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
39.6 bits(80) 0.0 18/31(58%) 0/31(0%) Plus/Minus
Query      522  LAQPVGIGLLNCIIINAVFQVTHFASNANSL  614
                L+QPV IG L  II+N + QVTH  SNA  L
Subject   6331  LSQPVRIGDLYRIIVNTILQVTHLPSNAYPL  6423

Range 6: 6341 to 6943 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
175.6 bits(377) 0.0 103/201(51%) 0/201(0%) Plus/Minus
Query        2  RQICRSWTL*SEPPSEH*YFDMGQRIARQNQKCHQQTDTHQVCLSSLLQRNQESMA*CTSQKDWECQELRL*RL*NSRPQ**VLLSNYFYRYQEHYEQQLEI*AHYRHPQTQTWTKL*LSYS**SHHAKHLRPNL*LQTIQKLSISSCAYF*PRTAHSCSALQLLLHSSFQLTTRPTCRHRTPQLHNYQCSFPGYPFREQC  604
                RQ  +  T *+ P  E * F MG R A QN K   +T THQVC  S      E+ A*CT   D  C E  L*+L*NS P+    L NYFY YQ HYE  LEI*AH +H QTQ  T L*L+YS* S++AK+LRPN  LQ   KLSISS A  *PR  H+ +   LL  SSFQ    P   HR P  HN Q + PGYP   QC
Subject   6341  RQTYKFLT**NVPL*EC*CFGMGPRTAHQNLKNLGRTSTHQVCSLSPALHTLENKA*CTFL*D*GCLEHLL*KL*NSHPRKLAPLLNYFYHYQAHYE*LLEI*AH*KHLQTQMLTML*LNYS*YSNNAKYLRPNQSLQIGLKLSISSYACS*PRI*HNYNGPPLLPRSSFQWIALPAGTHRRPLSHNCQYNSPGYPSP*QC  6943

Range 7: 6336 to 6719 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.8 bits(253) 0.0 70/128(55%) 0/128(0%) Minus/Plus
Query      226  NLHCSRNG*PGKLH**LCN*GVLCLQVGRVVN*NDE*RRS*SALQLCAVLG*K*AQDEMLNFWIV*SYRLGLKCLAWCDYYE*LS*SFVHV*VCGCL*CAQIXXXXXXXSW*R*K*FDKRTHH*GREF  609
                ++HC  +G*PG+L+* LC+ G+LC+  GR ++*ND+  RS   L LC +LG + A DEMLNF  +*S  LGLK LA  +YYE* S*S V++*VC C  CA ISS  S*C+W* *K*F+K  +  G EF
Subject   6336  DMHC*GDG*PGELY*QLCDRGLLCVPAGRAIH*NDDRGRSGGPL*LC*ILGQEQA*DEMLNFRPI*SD*LGLKYLALFEYYE*FS*SIVNI*VCRCFQCA*ISSSHS*CAW*W*K*FNKGANFRG*EF  6719

Range 8: 6707 to 6928 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.2 bits(101) 0.0 33/74(45%) 0/74(0%) Minus/Plus
Query       17  RTRVSQPSQPEFLTLPIFLGGTSSHTLLVAL*KGG*TYLMSICLLMTFLVLTCYSLTHIKISVFRGRLTS*SPR  238
                R R+S  SQ  F T  I   GT S  L     +G *TYLMS C    F VL C S TH K S F  R  S S +
Subject   6707  RMRIS*LSQQVFQTALISQEGTLSLILQGVQCRGK*TYLMSTCPSKIFQVLMCCSRTHTKTSAFLKRHISSSQK  6928

Range 9: 6473 to 6658 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
65.2 bits(136) 0.0 37/62(60%) 0/62(0%) Minus/Plus
Query      287  VCGSWLEISTR*DAQFLDCLKL*IRP*VFGMV*LL*IT*LKLCPRLSLWVSIVCSDFQLLFI  472
                V  SW   S R*DAQF   LK  IRP*VFG++*+L*I *LK C  LSL V  VC +FQ  FI
Subject   6473  VLDSWSGTSIR*DAQFQAYLKRLIRP*VFGII*VL*II*LKHCQHLSL*VFSVCLNFQ*SFI  6658

Range 10: 6338 to 6424 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.6 bits(102) 0.0 18/29(62%) 0/29(0%) Minus/Plus
Query      521  FALLAKWVTWKTALIIMQLRSPMPTGWAS  607
                +ALL +WVTW+  L IM+ RSPM TGW S
Subject   6338  YALLGRWVTWRIVLTIMR*RSPMRTGWES  6424

Range 11: 6765 to 6932 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.5 bits(82) 0.0 25/56(45%) 0/56(0%) Minus/Plus
Query       13  EVHQAILSWLRCKREDKHT**VSVC**HFWF*RAIL*PISKYQCSEGGSLHKVQDL  180
                +VH A+ S +    E +HT**V V    F F* A+L PI K+Q S  G+ H+V++L
Subject   6765  KVH*ALFSRVCSAGESEHT**VLVRPRFFRF*CAVLGPIPKHQHS*RGTFHQVKNL  6932

Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome

Sequence ID: JX559646.1 Length: 8726 Number of Matches: 12

Range 1: 6331 to 6939 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
443.7 bits(962) 0.0 179/203(88%) 0/203(0%) Minus/Plus
Query        6  KRICIAREMGNLENCIDNYAIEESYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFTAFTAGVPDTPNLSGRYIKPYSPGCAVKGRINILDEYLSVDDISGFDVLFSDPYQNISVPREAHFIKSKTCRF  614
                +RICIAREMGNLENCIDNYAIE SYAYRLGELSIEMM EEEVEAHYNCVRFLVRNKHKMRCSISGLFEA+D*ALS+WH + IMNNLVKALSTFEF+GV+SVL+FPVV+HSVPGSGKSSLIRELI+EDESF AFTAGVPD+PNL+GRYIKPYSPGCAV+G++NILDEYLSV DISGFDVL SDPYQN S+P+EAHFIKSKTCRF
Subject   6331  ERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAVD*ALSIWHCLSIMNNLVKALSTFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKVNILDEYLSVQDISGFDVLLSDPYQNTSIPKEAHFIKSKTCRF  6939

Range 2: 6336 to 6605 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
157.8 bits(338) 0.0 74/90(82%) 0/90(0%) Plus/Minus
Query      340  VDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTKNRTQL*CASTSSSFIISIDNSPNL*A*DSSIA*LSMQFSRLPISRAMQI  609
                VD ALTKLFII+  CQ LKA*S ASN PEIEHLILCLFLT+N TQL*CASTSSS IIS+D+SPNL A*D+SIA*LSMQFSRLPIS AM I
Subject   6336  VDNALTKLFIILKQCQILKA*STASNRPEIEHLILCLFLTRNLTQL*CASTSSSVIISMDSSPNLYA*DTSIA*LSMQFSRLPISLAMHI  6605

Range 3: 6684 to 6938 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
145.9 bits(312) 0.0 65/85(76%) 0/85(0%) Plus/Minus
Query        7  NLQVLDFMK*ASLGTLIF*YGSENSTSKPEMSSTDRYSSSMFILPFTAQPGEYGLMYLPERLGVSGTPAVKAVKLSSSVMSSLIK  261
                NLQVLDFMK ASLG L+F YGSE+STSKPE+S TD+YSSS+F  P TA PGE GLMYLP RLG+SGTPAVKA KLSSS ++SLIK
Subject   6684  NLQVLDFMKCASLGILVFWYGSESSTSKPEISWTDKYSSSIFTFPCTAHPGE*GLMYLPVRLGLSGTPAVKATKLSSSEINSLIK  6938

Range 4: 6463 to 6939 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
178.4 bits(383) 0.0 83/159(52%) 0/159(0%) Plus/Minus
Query        6  KSAGLGLYEVSLPRNTDILIWVRE*HVKTRNVINRQILIKYVYPPFYSATRRVWLDVPPRKIGSVRNSGCEGCETLVLSDEFSYQTTFTATRNTMNNNWKSEHTIDTHKLKRGQSFN*VIHNNHTMPNT*GLIYSFKQSRN*ASHLVLISNQEPHTVVV  482
                KS GLGLYE+ L  NT IL+ V + ++K  N+++ QILIKY++ P + A+ RV LDVP  ++ ++ N+ CE  ETLVL D   Y TT T  R TM N+WK +HT +T+K +  Q FN +IHN  TMPNT*GLI  FK + N*A HL+L+ N EPHT+VV
Subject   6463  KSTGLGLYEMRLFGNTGILVRV*KQYIKA*NILDGQILIKYIHFPLHCASWRVRLDVPSCEVRTIWNTCCESHETLVL*D*LPY*TTLTTARYTMYNDWKFKHTENTYKFEG*QCFNQIIHNTQTMPNT*GLINRFK*A*N*APHLMLVPN*EPHTIVV  6939

Range 5: 6332 to 6442 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.6 bits(78) 0.0 17/37(46%) 0/37(0%) Plus/Minus
Query      503  SSFQLTTRPTCRHRTPQLHNYQCSFPGYPFREQCKFS  613
                SSF+    P   HRTP  HNYQCS    P    C F+
Subject   6332  SSFRWIAHPIYMHRTPLSHNYQCSSLDCPSLWLCIFA  6442

Range 6: 6336 to 6719 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
96.8 bits(205) 0.0 61/128(48%) 0/128(0%) Minus/Plus
Query      226  NLHCSRNG*PGKLH**LCN*GVLCLQVGRVVN*NDE*RRS*SALQLCAVLG*K*AQDEMLNFWIV*SYRLGLKCLAWCDYYE*LS*SFVHV*VCGCL*CAQIXXXXXXXSW*R*K*FDKRTHH*GREF  609
                N+H  R+G   +LH**LC+ GVLC+ +G  ++ ND+       LQLC V  *+ A DE+LNF  +*S  LGLK LA  +YYE*  *S V++ +  C  CA ISS  +*C+W  *+*F+K  +  GREF
Subject   6336  NMHSQRDGQSRELH**LCDRGVLCI*IG*AIHRNDDRGGGGGTLQLCEVPS*EQA*DEVLNFRPI*SG*LGLKYLALFEYYE*FG*SIVNLRIYRCFQCA*ISSRYT*CTWQW*E*FNKGVNLRGREF  6719

Range 7: 6701 to 6940 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.5 bits(130) 0.0 41/80(51%) 0/80(0%) Minus/Plus
Query        5  SLRTRVSQPSQPEFLTLPIFLGGTSSHTLLVAL*KGG*TYLMSICLLMTFLVLTCYSLTHIKISVFRGRLTS*SPRPADL  244
                S RTRVS  SQ  F  +     GTSS TL  A  KG * YLMSIC    F  L     T  KI VF  R  S*SPRP DL
Subject   6701  SQRTRVSWLSQQVFQIVLTSQEGTSSLTLQDAQCKGK*IYLMSICPSKIFQALMYCFQTRTKIPVFPKRRIS*SPRPVDL  6940

Range 8: 6464 to 6940 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.8 bits(253) 0.0 76/159(48%) 0/159(0%) Plus/Minus
Query        5  QICRSWTL*SEPPSEH*YFDMGQRIARQNQKCHQQTDTHQVCLSSLLQRNQESMA*CTSQKDWECQELRL*RL*NSRPQ**VLLSNYFYRYQEHYEQQLEI*AHYRHPQTQTWTKL*LSYS**SHHAKHLRPNL*LQTIQKLSISSCAYF*PRTAHSCS  481
                QI RSWTL*+ P  E+ YF  G +   Q+ K   +T+THQV   SL  R  ES A*CT     +  E  L*+  NSRP     L NY Y  Q HY  +LEI*AH +H   +  T L* +YS* S++AK+LRPN  LQ   KLS SS A  *  T+H+CS
Subject   6464  QIYRSWTL*NAPLWEYWYFGTGLKAVHQSLKYLGRTNTHQVYSLSLALRILESKA*CTFL*G*DYLEHLL*KPRNSRPLRLTPLLNYSYHCQVHYV*RLEI*AH*KHL*IRRLTML*PNYS*YSNNAKYLRPNQPLQIGLKLSTSSYACS*LGTSHNCS  6940

Range 9: 6331 to 6423 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.6 bits(56) 0.0 15/31(48%) 0/31(0%) Plus/Minus
Query      522  LAQPVGIGLLNCIIINAVFQVTHFASNANSL  614
                L Q + IG L  IIINAV  + H +  A SL
Subject   6331  LTQSICIGHLYRIIINAVL*IAHLSGYAYSL  6423

Range 10: 6464 to 6658 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.3 bits(123) 0.0 37/65(57%) 0/65(0%) Minus/Plus
Query      287  TTTVCGSWLEISTR*DAQFLDCLKL*IRP*VFGMV*LL*IT*LKLCPRLSLWVSIVCSDFQLLFI  481
                TT V GS L  S R* AQF   LK  IRP*VFG+V*+L*I  LK C   +L V  VC +FQ L+I
Subject   6464  TTIV*GS*LGTSIR*GAQFQAYLKRLIRP*VFGIV*VL*IIWLKHCQPSNL*VFSVCLNFQSLYI  6658

Range 11: 6765 to 6932 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.1 bits(114) 0.0 28/56(50%) 0/56(0%) Minus/Plus
Query       13  EVHQAILSWLRCKREDKHT**VSVC**HFWF*RAIL*PISKYQCSEGGSLHKVQDL  180
                +VHQA+LS +R  RE ++T**V V   +F  *     P+ KYQ S+ G+ HKVQDL
Subject   6765  KVHQALLSRMRSARESEYT**VFVRPRYFRL*CTAFRPVPKYQYSQRGAFHKVQDL  6932

Range 12: 6335 to 6424 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
32.2 bits(64) 0.0 14/30(47%) 0/30(0%) Minus/Plus
Query      521  EFALLAKWVTWKTALIIMQLRSPMPTGWAS  610
                E+A   +W   +TALIIM+ R PM   W S
Subject   6335  EYA*PERWAI*RTALIIMR*RCPMHIDWVS  6424

Nucleotide Sequence (354 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 10 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
36
72
108
144
180
216
252
288
324
354

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 10

Range 1: 4129 to 4479 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
279.2 bits(603) 0.0 115/117(98%) 0/117(0%) Plus/Plus
Query        2  TFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDEECKVAKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYD  352
                TFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK+DLEMDEECKV KAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYD
Subject   4129  TFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYD  4479

Range 2: 4128 to 4481 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
254.9 bits(550) 0.0 113/118(96%) 0/118(0%) Minus/Minus
Query        1  ESYVL*QGSPASEMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFATLHSSSISRSFLIELARARLGETKVTNFPSDLFMKLLYRKLFPAPNV  354
                ESYVL*QGSPA EMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAF TLHSSSISRS LIE ARARLGET VTNFPSDLFMKLLYRKLFPAPNV
Subject   4128  ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHSSSISRSLLIEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNV  4481

Range 3: 4305 to 4481 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
114.2 bits(243) 0.0 48/59(81%) 0/59(0%) Plus/Plus
Query      178  CCYLRSFP*KGYRSKGWSLRDL**SSAISPWLH*SMSPCYSQ*RFHLTCW*SLSKHI*F  354
                CCYL S P*+ YR KGWSLRDL**SSAI  WLH SMS CY Q*RFHL+CW*SLSKHI*F
Subject   4305  CCYL*SLP*ESYRPKGWSLRDL**SSAIPSWLHRSMSSCYPQ*RFHLSCW*SLSKHI*F  4481

Range 4: 4128 to 4238 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.9 bits(179) 0.0 32/37(86%) 0/37(0%) Plus/Plus
Query        1  YIWGWKEFPIQELHEEI*RKICDFCFT*AGSSQFNQE  111
                YIWGWKEFPIQELHEEI*RKIC+ C T*AGSS+FNQ+
Subject   4128  YIWGWKEFPIQELHEEI*RKICNICLT*AGSSKFNQK  4238

Range 5: 4297 to 4479 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
113.8 bits(242) 0.0 50/61(82%) 0/61(0%) Minus/Minus
Query      170  IICALTRITSK*DESVTANNKET*INVTRGK*LNFIKDHAMTSL*TCNLSKENFEGNNIPA  352
                IICALTRITSK DESVTA+NK+T*I+VTR +*LNFIKDHAMTSL* CN  KE+F+GNNIPA
Subject   4297  IICALTRITSKRDESVTADNKKT*IDVTRRE*LNFIKDHAMTSL*ACNFPKEDFKGNNIPA  4479

Range 6: 4129 to 4254 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.3 bits(158) 0.0 35/42(83%) 0/42(0%) Minus/Minus
Query        2  IHFQVLLD*IG*SPPR*NKSHKFSFRSLHEALV*ETLSSPKC  127
                IHF V  D*I *SPPR*+K +KFSFRSLHEALV*ETLSSPKC
Subject   4129  IHF*VPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKC  4254

Range 7: 4307 to 4480 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
108.7 bits(231) 0.0 47/58(81%) 0/58(0%) Minus/Minus
Query      180  NHMCFDKDHQQVR*KRHCE*QGDIDQCNQGEIAELHQRSRNDQPLDL*PF*GKLRR*Q  353
                NHMCFDKDHQQ R*KRHC *Q DID+CNQ  IAELHQRSRNDQPL L*  *G+L+R*Q
Subject   4307  NHMCFDKDHQQER*KRHCG*QEDIDRCNQEGIAELHQRSRNDQPLGL*LS*GRLQR*Q  4480

Range 8: 4130 to 4234 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.6 bits(115) 0.0 31/35(89%) 0/35(0%) Minus/Minus
Query        3  *LNWLEPA*VKQKSQIFLQIXXXXSCIGNSFQPQM  107
                *LN LEPA*V+Q  QIFLQISS*SSCIGNSFQPQM
Subject   4130  *LNLLEPA*VRQMLQIFLQISS*SSCIGNSFQPQM  4234

Range 9: 4226 to 4480 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
109.2 bits(232) 0.0 69/85(81%) 0/85(0%) Plus/Plus
Query       99  IQSRRTWKWMKSXXXXXXXXXXXXAGMLLPSKFSLERLQV*RLVIA*SLMKFSYFPLVTLIYVSLLFAVTLSSHLLVILVKAHMI  353
                IQS+ T KWMKSVRW RQ NQRRRAGMLLP K SL +LQ *RLVIA*SLMKFSY  LVT IYV LL AVTLSS LLVILVKAHMI
Subject   4226  IQSKGT*KWMKSVRW*RQANQRRRAGMLLPLKSSLGKLQA*RLVIA*SLMKFSYSLLVTSIYVFLLSAVTLSSLLLVILVKAHMI  4480

Range 10: 4130 to 4189 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.3 bits(97) 0.0 20/20(100%) 0/20(0%) Plus/Plus
Query        3  HLGLERVSYTRAS*RDLKEN  62
                HLGLERVSYTRAS*RDLKEN
Subject   4130  HLGLERVSYTRAS*RDLKEN  4189

Grapevine rupestris stem pitting associated virus isolate Tannat Rspav1, complete genome

Sequence ID: KR528585.1 Length: 8595 Number of Matches: 10

Range 1: 4111 to 4461 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
276.0 bits(596) 0.0 114/117(97%) 0/117(0%) Plus/Plus
Query        2  TFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDEECKVAKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYD  352
                TFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK+DLEMDE CKV KAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYD
Subject   4111  TFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEGCKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYD  4461

Range 2: 4110 to 4463 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
251.2 bits(542) 0.0 111/118(94%) 0/118(0%) Minus/Minus
Query        1  ESYVL*QGSPASEMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFATLHSSSISRSFLIELARARLGETKVTNFPSDLFMKLLYRKLFPAPNV  354
                ESYVL*QGSPA EMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAF TLH SSISRS LIE A+ARLGET VTNFPSDLFMKLLYRKLFPAPNV
Subject   4110  ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHPSSISRSLLIEFAKARLGETNVTNFPSDLFMKLLYRKLFPAPNV  4463

Range 3: 4208 to 4462 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
117.9 bits(251) 0.0 68/85(80%) 0/85(0%) Plus/Plus
Query       99  IQSRRTWKWMKSXXXXXXXXXXXXAGMLLPSKFSLERLQV*RLVIA*SLMKFSYFPLVTLIYVSLLFAVTLSSHLLVILVKAHMI  353
                IQS+ TW+WM+ VRW RQ NQRRRAGML P KF L +LQ *RLVIA*SLMKFSY PLVT IYV LLFAVTLSS LLVILVKAHMI
Subject   4208  IQSKGTWRWMRGVRW*RQANQRRRAGMLSPLKFFLGKLQA*RLVIA*SLMKFSYSPLVTSIYVFLLFAVTLSSLLLVILVKAHMI  4462

Range 4: 4110 to 4220 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.2 bits(173) 0.0 31/37(84%) 0/37(0%) Plus/Plus
Query        1  YIWGWKEFPIQELHEEI*RKICDFCFT*AGSSQFNQE  111
                YIWGWKEFPIQELHEEI*RKIC+ C T*AG S+FNQ+
Subject   4110  YIWGWKEFPIQELHEEI*RKICNICLT*AGFSKFNQK  4220

Range 5: 4279 to 4461 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
117.9 bits(251) 0.0 51/61(84%) 0/61(0%) Minus/Minus
Query      170  IICALTRITSK*DESVTANNKET*INVTRGK*LNFIKDHAMTSL*TCNLSKENFEGNNIPA  352
                IICALTRITSK DESVTANNK+T*I+VTRG+*LNFIKDHAMTSL* CN  K+NF+G+NIPA
Subject   4279  IICALTRITSKRDESVTANNKKT*IDVTRGE*LNFIKDHAMTSL*ACNFPKKNFKGDNIPA  4461

Range 6: 4111 to 4236 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.7 bits(161) 0.0 35/42(83%) 0/42(0%) Minus/Minus
Query        2  IHFQVLLD*IG*SPPR*NKSHKFSFRSLHEALV*ETLSSPKC  127
                IH QV  D*I *SPPR*+K +KFSFRSLHEALV*ETLSSPKC
Subject   4111  IHLQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKC  4236

Range 7: 4289 to 4462 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
113.3 bits(241) 0.0 49/58(84%) 0/58(0%) Minus/Minus
Query      180  NHMCFDKDHQQVR*KRHCE*QGDIDQCNQGEIAELHQRSRNDQPLDL*PF*GKLRR*Q  353
                NHMCFDKDHQQ R*KRHCE*Q DID+CNQG IAELHQRSRNDQPL L*  * KL+R*Q
Subject   4289  NHMCFDKDHQQER*KRHCE*QEDIDRCNQGGIAELHQRSRNDQPLGL*LS*EKLQR*Q  4462

Range 8: 4112 to 4216 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.8 bits(111) 0.0 30/35(86%) 0/35(0%) Minus/Minus
Query        3  *LNWLEPA*VKQKSQIFLQIXXXXSCIGNSFQPQM  107
                *LN L+PA*V+Q  QIFLQISS*SSCIGNSFQPQM
Subject   4112  *LNLLKPA*VRQMLQIFLQISS*SSCIGNSFQPQM  4216

Range 9: 4287 to 4463 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
117.0 bits(249) 0.0 49/59(83%) 0/59(0%) Plus/Plus
Query      178  CCYLRSFP*KGYRSKGWSLRDL**SSAISPWLH*SMSPCYSQ*RFHLTCW*SLSKHI*F  354
                CC+L SF *+ YR KGWSLRDL**SSAI PWLH SMS CYSQ*RFHL+CW*SLSKHI*F
Subject   4287  CCHL*SFS*ESYRPKGWSLRDL**SSAIPPWLHRSMSSCYSQ*RFHLSCW*SLSKHI*F  4463

Range 10: 4112 to 4171 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.3 bits(97) 0.0 20/20(100%) 0/20(0%) Plus/Plus
Query        3  HLGLERVSYTRAS*RDLKEN  62
                HLGLERVSYTRAS*RDLKEN
Subject   4112  HLGLERVSYTRAS*RDLKEN  4171

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 11

Range 1: 4129 to 4479 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
275.5 bits(595) 0.0 113/117(97%) 0/117(0%) Plus/Plus
Query        2  TFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDEECKVAKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYD  352
                TFGAGKSFL+KSFMKRSEGKFVTFVSPRRALANSIK+DLEMD+ECKV KAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYD
Subject   4129  TFGAGKSFLHKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYD  4479

Range 2: 4128 to 4481 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
247.1 bits(533) 0.0 110/118(93%) 0/118(0%) Minus/Minus
Query        1  ESYVL*QGSPASEMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFATLHSSSISRSFLIELARARLGETKVTNFPSDLFMKLLYRKLFPAPNV  354
                ESYVL*QGSPA EMKASLR+TRRHRSM*PGGNS TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAF TLHSSSISRS LIE ARARLGET VTNFPSDLFMKLL RKLFPAPNV
Subject   4128  ESYVL*QGSPAREMKASLRMTRRHRSM*PGGNSWTSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHSSSISRSLLIEFARARLGETNVTNFPSDLFMKLLCRKLFPAPNV  4481

Range 3: 4305 to 4481 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.5 bits(226) 0.0 46/59(78%) 0/59(0%) Plus/Plus
Query      178  CCYLRSFP*KGYRSKGWSLRDL**SSAISPWLH*SMSPCYSQ*RFHLTCW*SLSKHI*F  354
                C YL S  *+ YR KGWSLRDL**S AI PWLH SMS C+SQ*RFHL+CW*SLSKHI*F
Subject   4305  CRYL*SLS*ESYRPKGWSLRDL**SPAIPPWLHRSMSSCHSQ*RFHLSCW*SLSKHI*F  4481

Range 4: 4128 to 4238 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.3 bits(169) 0.0 30/37(81%) 0/37(0%) Plus/Plus
Query        1  YIWGWKEFPIQELHEEI*RKICDFCFT*AGSSQFNQE  111
                +IWGWKEFP QELHEEI*RKIC+ C T*AGSS+FNQ+
Subject   4128  HIWGWKEFPTQELHEEI*RKICNICLT*AGSSKFNQK  4238

Range 5: 4226 to 4261 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
27.2 bits(53) 0.0 9/12(75%) 0/12(0%) Plus/Plus
Query       99  IQSRRTWKWMKS  134
                IQS+ TWKWM S
Subject   4226  IQSKGTWKWMMS  4261

Range 6: 4297 to 4479 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
111.0 bits(236) 0.0 48/61(79%) 0/61(0%) Minus/Minus
Query      170  IICALTRITSK*DESVTANNKET*INVTRGK*LNFIKDHAMTSL*TCNLSKENFEGNNIPA  352
                IICALTRITSK DESVTAN+K+T*I+VTRG+*L+FIKDHAMTSL* CN  K++F+GN+IPA
Subject   4297  IICALTRITSKRDESVTANDKKT*IDVTRGE*LDFIKDHAMTSL*ACNFPKKDFKGNDIPA  4479

Range 7: 4129 to 4254 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.4 bits(167) 0.0 36/42(86%) 0/42(0%) Minus/Minus
Query        2  IHFQVLLD*IG*SPPR*NKSHKFSFRSLHEALV*ETLSSPKC  127
                IHFQV  D*I *SPPR*+K +KFSFRSLHEALV*ETLSSPKC
Subject   4129  IHFQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKC  4254

Range 8: 4307 to 4480 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.9 bits(227) 0.0 46/58(79%) 0/58(0%) Minus/Minus
Query      180  NHMCFDKDHQQVR*KRHCE*QGDIDQCNQGEIAELHQRSRNDQPLDL*PF*GKLRR*Q  353
                NHMCFDKDHQQ R*KRHCE*Q DID+CNQG IA LHQRSRNDQPL L*  * +L+R*+
Subject   4307  NHMCFDKDHQQER*KRHCE*QEDIDRCNQGGIAGLHQRSRNDQPLGL*LS*ERLQR*R  4480

Range 9: 4130 to 4234 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.1 bits(114) 0.0 30/35(86%) 0/35(0%) Minus/Minus
Query        3  *LNWLEPA*VKQKSQIFLQIXXXXSCIGNSFQPQM  107
                *LN LEPA*V+Q  QIFLQISS*SSC+GNSFQPQM
Subject   4130  *LNLLEPA*VRQMLQIFLQISS*SSCVGNSFQPQM  4234

Range 10: 4298 to 4480 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.3 bits(195) 0.0 48/61(79%) 0/61(0%) Plus/Plus
Query      171  AGMLLPSKFSLERLQV*RLVIA*SLMKFSYFPLVTLIYVSLLFAVTLSSHLLVILVKAHMI  353
                AGM LP K  L +LQ *RLVIA*SLMK SY PLVT IYV L FAVTLSS LLVILVKAHMI
Subject   4298  AGMSLPLKSFLGKLQA*RLVIA*SLMKSSYSPLVTSIYVFLSFAVTLSSLLLVILVKAHMI  4480

Range 11: 4130 to 4189 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.3 bits(97) 0.0 20/20(100%) 0/20(0%) Plus/Plus
Query        3  HLGLERVSYTRAS*RDLKEN  62
                HLGLERVSYTRAS*RDLKEN
Subject   4130  HLGLERVSYTRAS*RDLKEN  4189

Grapevine rupestris stem pitting associated virus complete genome, isolate PG, genomic RNA

Sequence ID: HE591388.1 Length: 8725 Number of Matches: 10

Range 1: 4129 to 4479 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
273.7 bits(591) 0.0 112/117(96%) 0/117(0%) Plus/Plus
Query        2  TFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDEECKVAKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYD  352
                TFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK DLEMD+ CKVAKAGKSKKEGWDVVTFEVFLRKV GLKAGHCVIFDEVQLFPPGYIDLCLL+IRSDAFISLAGDPCQSTYD
Subject   4129  TFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQLFPPGYIDLCLLIIRSDAFISLAGDPCQSTYD  4479

Range 2: 4128 to 4481 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
223.8 bits(482) 0.0 99/118(84%) 0/118(0%) Minus/Minus
Query        1  ESYVL*QGSPASEMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFATLHSSSISRSFLIELARARLGETKVTNFPSDLFMKLLYRKLFPAPNV  354
                ESYVL* GSPASEMKASLRI  +HRSM PGGN+ TSSKITQ PAF P TFLRKTSKVTTS PSFFDLPA ATL  SSISRSFLIE A+ARLGETKVTN PSDLF+KLLY+KLFPAPNV
Subject   4128  ESYVL*HGSPASEMKASLRIMSKHRSMYPGGNNWTSSKITQWPAFNPATFLRKTSKVTTSHPSFFDLPALATLQLSSISRSFLIEFAKARLGETKVTNLPSDLFIKLLYKKLFPAPNV  4481

Range 3: 4300 to 4479 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.6 bits(150) 0.0 32/60(53%) 0/60(0%) Minus/Minus
Query      173  IICALTRITSK*DESVTANNKET*INVTRGK*LNFIKDHAMTSL*TCNLSKENFEGNNIP  352
                IICALT IT K*+ES+T  N++ *I+V+R K L+ IK+H + SL +CN S+EN +   IP
Subject   4300  IICALTWITGK*NESITTYNEQA*IDVSRRKQLDLIKNHTVASLQSCNFSEENLKSYYIP  4479

Range 4: 4129 to 4254 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.0 bits(105) 0.0 22/42(52%) 0/42(0%) Minus/Minus
Query        2  IHFQVLLD*IG*SPPR*NKSHKFSFRSLHEALV*ETLSSPKC  127
                IHF+++ D*I *S    NK ++F+ R  H+ LV ETL SPKC
Subject   4129  IHFKIIFD*IC*STSGRNKGYEFTLRPFHKTLVQETLPSPKC  4254

Range 5: 4305 to 4481 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.5 bits(130) 0.0 30/59(51%) 0/59(0%) Plus/Plus
Query      178  CCYLRSFP*KGYRSKGWSLRDL**SSAISPWLH*SMSPCYSQ*RFHLTCW*SLSKHI*F  354
                C     FP K  R +GW L D **   +S W+H SM   Y+ * FH TC *S+SKHI*F
Subject   4305  CSNF*GFPQKSCRIEGWPLCDF**GPVVSSWIHRSMLAHYT**CFHFTCR*SMSKHI*F  4481

Range 6: 4128 to 4238 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.3 bits(99) 0.0 18/37(49%) 0/37(0%) Plus/Plus
Query        1  YIWGWKEFPIQELHEEI*RKICDFCFT*AGSSQFNQE  111
                YIWGW+EF +QE +E++*  I + CF+    S+FNQ+
Subject   4128  YIWGWEEFLVQEFYEKV*G*IRNLCFSQTCFSKFNQK  4238

Range 7: 4322 to 4480 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.4 bits(132) 0.0 29/53(55%) 0/53(0%) Minus/Minus
Query      195  NHMCFDKDHQQVR*KRHCE*QGDIDQCNQGEIAELHQRSRNDQPLDL*PF*GK  353
                NHMCFD DH+QV+*K H  *   ID+C Q E    HQ+S + QP  L  F*GK
Subject   4322  NHMCFDMDHRQVK*KHHYV**ASIDRCIQEETTGPHQKSHSGQPSILQLF*GK  4480

Range 8: 4130 to 4234 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
27.2 bits(53) 0.0 18/35(51%) 0/35(0%) Minus/Minus
Query        3  *LNWLEPA*VKQKSQIFLQIXXXXSCIGNSFQPQM  107
                *LN L+    KQ+ +I+ Q  S*+SC  NS QPQM
Subject   4130  *LNLLKHVWEKQRLRIYPQTFS*NSCTRNSSQPQM  4234

Range 9: 4319 to 4480 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.5 bits(117) 0.0 31/54(57%) 0/54(0%) Plus/Plus
Query      192  KFSLERLQV*RLVIA*SLMKFSYFPLVTLIYVSLLFAVTLSSHLLVILVKAHMI  353
                +FS E+LQ *RL   * LM+ S F L T IY   L+ V LS HL VI VKAHMI
Subject   4319  RFSSEKLQD*RLATV*FLMRSSCFLLDTSIYACSLYVVMLSFHLPVIHVKAHMI  4480

Range 10: 4130 to 4189 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
26.3 bits(51) 0.0 12/20(60%) 0/20(0%) Plus/Plus
Query        3  HLGLERVSYTRAS*RDLKEN  62
                HLGL RVS TR  *+ L+ N
Subject   4130  HLGLGRVSCTRVL*KGLRVN  4189

Rupestris stem pitting associated virus strain SG1, complete genome

Sequence ID: AY881626.1 Length: 8742 Number of Matches: 9

Range 1: 4129 to 4479 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
273.7 bits(591) 0.0 113/117(97%) 0/117(0%) Plus/Plus
Query        2  TFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDEECKVAKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYD  352
                TFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK DLEMD+ CKVAKAGKSKKEGWDVVTFEVFLRKV+GLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYD
Subject   4129  TFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYD  4479

Range 2: 4128 to 4481 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
228.3 bits(492) 0.0 100/118(85%) 0/118(0%) Minus/Minus
Query        1  ESYVL*QGSPASEMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFATLHSSSISRSFLIELARARLGETKVTNFPSDLFMKLLYRKLFPAPNV  354
                ESYVL  GSPASEMKASLR+T +HRS+ PGGN+*TSSKITQ PAF+P TFLRKTSKVTTS PSFFDLPA ATL  SSISRSFLIE A+ARLGETKVTNFPSDLFMKLLY+KLFPAPNV
Subject   4128  ESYVLWHGSPASEMKASLRMTSKHRSIYPGGNN*TSSKITQWPAFKPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNV  4481

Range 3: 4300 to 4479 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.5 bits(152) 0.0 31/60(52%) 0/60(0%) Minus/Minus
Query      173  IICALTRITSK*DESVTANNKET*INVTRGK*LNFIKDHAMTSL*TCNLSKENFEGNNIP  352
                I+CAL  +T K*+ES+T  +K+T*I+++RGK LN I+++ M SL T N SKEN + + IP
Subject   4300  IVCALAWVTGK*NESITTYDKQT*IDISRGKQLNLIENYTMASLQTRNFSKENLKSHYIP  4479

Range 4: 4132 to 4254 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.9 bits(107) 0.0 23/41(56%) 0/41(0%) Minus/Minus
Query        5  IHFQVLLD*IG*SPPR*NKSHKFSFRSLHEALV*ETLSSPK  127
                IHF+++ D*I       +K +KFSFR LHE L+ ETLSSPK
Subject   4132  IHFKIIFD*ICQGSSGGDKGYKFSFRPLHETLIQETLSSPK  4254

Range 5: 4128 to 4238 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.5 bits(117) 0.0 19/37(51%) 0/37(0%) Plus/Plus
Query        1  YIWGWKEFPIQELHEEI*RKICDFCFT*AGSSQFNQE  111
                ++WGWKEF + E HEE+*RKIC+ C       +FNQ+
Subject   4128  HVWGWKEFLV*EFHEEV*RKICNLCLPQTSLGKFNQK  4238

Range 6: 4305 to 4481 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.1 bits(116) 0.0 25/59(42%) 0/59(0%) Plus/Plus
Query      178  CCYLRSFP*KGYRSKGWSLRDL**SSAISPWLH*SMSPCYSQ*RFHLTCW*SLSKHI*F  354
                C     FP*K +  +GW L +  * S +SPW++ SM  C++ * FH TC * + +HI F
Subject   4305  CSDF*GFP*KSFWFEGWPLCNFR*GSVVSPWIYRSMFACHT**CFHFTCR*PMPEHIRF  4481

Range 7: 4133 to 4480 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
86.3 bits(182) 0.0 60/116(52%) 0/116(0%) Plus/Plus
Query        6  LGLERVSYTRAS*RDLKENXXXXXXXXXXXPIQSRRTWKWMKSXXXXXXXXXXXXAGMLLPSKFSLERLQV*RLVIA*SLMKFSYFPLVTLIYVSLLFAVTLSSHLLVILVKAHMI  353
                LGLERVS  R S*R LKENL* L        IQS+   KWM + +  +Q NQRR+ GM    +FSLE+  V*RL I *  M+FS FPL   IYV L + V LS HL V   +AH I
Subject   4133  LGLERVSCIRVS*RGLKENL*PLSPPDEPWQIQSKMILKWMMAAKLLKQANQRRKGGM**LLRFSLEKFLV*RLAIV*FSMRFSCFPLDISIYVCLSYVVMLSFHLPVTHARAHTI  4480

Range 8: 4322 to 4480 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.8 bits(109) 0.0 25/53(47%) 0/53(0%) Minus/Minus
Query      195  NHMCFDKDHQQVR*KRHCE*QGDIDQCNQGEIAELHQRSRNDQPLDL*PF*GK  353
                N MC    H+QV+*K H  *Q +ID+  QGE  E H++  N QP +   F*GK
Subject   4322  NRMCSGMGHRQVK*KHHYV*QANIDRYIQGETTEPHRKLHNGQPSNQKLF*GK  4480

Range 9: 4133 to 4204 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.8 bits(50) 0.0 16/24(67%) 0/24(0%) Minus/Minus
Query        6  KQKSQIFLQIXXXXSCIGNSFQPQ  77
                +Q+ QIFLQ SS*+S   NSFQPQ
Subject   4133  RQRLQIFLQTSS*NSYTRNSFQPQ  4204

Nucleotide Sequence (404 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 10 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
41
82
123
164
205
246
287
328
369
404

Descriptions

Alignments

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OE8

Sequence ID: AB277784.1 Length: 2876 Number of Matches: 6

Range 1: 2251 to 2652 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
320.9 bits(694) 0.0 133/134(99%) 0/134(0%) Minus/Plus
Query        1  DVMDEGAIDELIRAFGESGIAESVQFDVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGIKRAPTK  402
                +VMDEGAIDELIRAFGESGIAESVQFDVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGIKRAPTK
Subject   2251  NVMDEGAIDELIRAFGESGIAESVQFDVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGIKRAPTK  2652

Range 2: 2301 to 2648 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
261.3 bits(564) 0.0 112/116(97%) 0/116(0%) Plus/Minus
Query        5  VGALLMPPFGSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRWMFHTIFA*YMQNLRNVVTSLIIPAISDLFRSQNGLLPIRVDLWELPTSEQ*RAISIATSNCTLSAMPD  352
                VGALL+PPFGSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRW+FHTIFA*YMQNLRNVVTSLIIPAISDLFRSQNGLLPI+VDLWELPTSEQ*RAIS+ATSNCTLSAMPD
Subject   2301  VGALLIPPFGSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRWIFHTIFA*YMQNLRNVVTSLIIPAISDLFRSQNGLLPIKVDLWELPTSEQ*RAISMATSNCTLSAMPD  2648

Range 3: 2251 to 2652 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
234.3 bits(505) 0.0 96/134(72%) 0/134(0%) Plus/Minus
Query        1  FGWSSLNATLRFKRALICDSKEEVKGCKFLILIKSLLGPISGWNPRLQMDVPHDFCIVHAKST*CGHLPYNPSYF*SV*VTKWTLAYQG*PLGATNIRAVTCYIYSHIKLHAFSYARFTKRTYQLVYCTFIHDI  402
                F WSS ++TL FKR LICDS++EVKGCKF ILIK  LGPIS W PRLQMD+PHDFCIVHAKST  G+LPYNPS F*S+ +T+W  A QG* LGA+NIRAVTC IY HIKL+A  YA F+K T QL+YCT IHDI
Subject   2251  FCWSSFDSTLWFKRTLICDSQKEVKGCKFFILIKPFLGPISWWYPRLQMDIPHDFCIVHAKSTQRGYLPYNPSNF*SIQITEWAFANQG*SLGASNIRAVTCDIYGHIKLYALCYA*FSKCTNQLIYCTLIHDI  2652

Range 4: 2250 to 2651 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
218.3 bits(470) 0.0 94/134(70%) 0/134(0%) Minus/Plus
Query        2  RCHG*RCNRRADTCVW*IWHS*KRAI*CGYRYSTSLL*CW*LPEVNPDRQESIL*PKQIRNSWDYKGGDHIT*ILHVLCKNRVEHPSGDGDSTR*LGQEGI**E*EICSL*LLPWSHR*ERA*TEGWH*ESSNQ  403
                +CHG* CNR AD+C+W I HS +R I*CG+RY TSLL*CW LP++N D Q+ IL* + IRN WDYKGG+H+ *ILHVLCKNRVE+PSGDGD+T *LGQE +**E*+ICSL*LL  SHR*E A*T+GW+ +SSN+
Subject   2250  KCHG*GCNR*ADSCIWRIRHSRERTI*CGHRYRTSLL*CWKLPKINLDWQKPIL*SE*IRNCWDYKGGNHVA*ILHVLCKNRVEYPSGDGDTTS*LGQERV**E*KICSL*LLSGSHR*ECA*TKGWNQKSSNK  2651

Range 5: 2249 to 2647 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
211.4 bits(455) 0.0 97/133(73%) 0/133(0%) Minus/Plus
Query        6  QMSWMKVQ*TS*YVRLVNLA*LKACNLMWL*I*HVTALMLVAPRGQP**ARVHFVT*TDQK*LGL*GR*PHYVDFACTMQKSCGTSIWRRGFHPLIGPRRDLMRMRNLQPLTSSLESQMRARLNRRVALRELQ  404
                QMSWM+VQ* S*+V L N A* +A NLMW *I HVTALML AP+ QP* A+ H V * DQK LGL*GR*P  VDFACTMQKSCG SIWRRG+H LIGPR+ LMRM+NLQPLTS  ESQMR RLN+RV  +ELQ
Subject   2249  QMSWMRVQ*MS*FVHLENQA*QRAYNLMWP*ISHVTALMLEAPKDQP*LAKAHSVI*IDQKLLGL*GR*PRCVDFACTMQKSCGISIWRRGYHQLIGPRKGLMRMKNLQPLTSFWESQMRVRLNQRVESKELQ  2647

Range 6: 2249 to 2647 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
205.9 bits(443) 0.0 95/133(71%) 0/133(0%) Plus/Minus
Query        6  LELS*CHPSVQARSHL*LQGRSQRLQISHSH*IPSWPN*RVESPSPDGCSTRFLHSTCKIYVMWSPPL*SQLFLICLGHKMDSCLSGLTSGSYQHQSSDVLYL*PHQIARFQLCQIHQTHVSARLLHLHP*HL  404
                LEL * HP VQA SHL*L  RSQRLQI HSH*  SWPN* V SPSPDG STRFLHSTCKIY  W PPL*SQ FLI   H+M  C S L  GS+QHQSSDV YL PHQI R  LC I Q H SA LLH HP*HL
Subject   2249  LELF*FHPLVQAHSHL*LPERSQRLQIFHSH*TLSWPN*LVVSPSPDGYSTRFLHSTCKIYATWLPPL*SQQFLIYSDHRMGFCQSRLIFGSFQHQSSDVRYLWPHQIVRSLLCLILQMHESAHLLHPHP*HL  2647

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: Hiz3

Sequence ID: AB277785.1 Length: 2876 Number of Matches: 6

Range 1: 2251 to 2652 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
320.9 bits(694) 0.0 133/134(99%) 0/134(0%) Minus/Plus
Query        1  DVMDEGAIDELIRAFGESGIAESVQFDVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGIKRAPTK  402
                +VMDEGAIDELIRAFGESGIAESVQFDVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGIKRAPTK
Subject   2251  NVMDEGAIDELIRAFGESGIAESVQFDVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGIKRAPTK  2652

Range 2: 2251 to 2652 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
290.2 bits(627) 0.0 117/134(87%) 0/134(0%) Plus/Minus
Query        1  FGWSSLNATLRFKRALICDSKEEVKGCKFLILIKSLLGPISGWNPRLQMDVPHDFCIVHAKST*CGHLPYNPSYF*SV*VTKWTLAYQG*PLGATNIRAVTCYIYSHIKLHAFSYARFTKRTYQLVYCTFIHDI  402
                F WSS N+TL  KR LICDS+E++KGCK  ILIKS LGP+S W PRLQMDVPHDFCIVHAKST*CGHLPYNPSYF*SV*VTKWTLAYQG*PLGATNIRAVTCYIYSHIKLHAFSYARFTK T QLVYCTFIHDI
Subject   2251  FRWSSFNSTLWLKRTLICDSQEKIKGCKLFILIKSFLGPVSWWYPRLQMDVPHDFCIVHAKST*CGHLPYNPSYF*SV*VTKWTLAYQG*PLGATNIRAVTCYIYSHIKLHAFSYARFTKCTNQLVYCTFIHDI  2652

Range 3: 2250 to 2651 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
277.4 bits(599) 0.0 116/134(87%) 0/134(0%) Minus/Plus
Query        2  RCHG*RCNRRADTCVW*IWHS*KRAI*CGYRYSTSLL*CW*LPEVNPDRQESIL*PKQIRNSWDYKGGDHIT*ILHVLCKNRVEHPSGDGDSTR*LGQEGI**E*EICSL*LLPWSHR*ERA*TEGWH*ESSNQ  403
                +CHG*RCNRRAD+C+W*IWHS*KRAI*CGYRYSTSLL*CW*LPEVNPDRQESIL*PKQIRNSWDYKGGDHIT*ILHVLCKNRVEHPSGDGD+T *LGQE I**E*++CSL*    SHR*E A* +GW+*+SSN+
Subject   2250  KCHG*RCNRRADSCIW*IWHS*KRAI*CGYRYSTSLL*CW*LPEVNPDRQESIL*PKQIRNSWDYKGGDHIT*ILHVLCKNRVEHPSGDGDTTS*LGQERI**E*KVCSL*FFLGSHR*ECA*AKGWN*KSSNE  2651

Range 4: 2249 to 2647 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
273.7 bits(591) 0.0 116/133(87%) 0/133(0%) Plus/Minus
Query        6  LELS*CHPSVQARSHL*LQGRSQRLQISHSH*IPSWPN*RVESPSPDGCSTRFLHSTCKIYVMWSPPL*SQLFLICLGHKMDSCLSGLTSGSYQHQSSDVLYL*PHQIARFQLCQIHQTHVSARLLHLHP*HL  404
                LEL * HP  QA SHL*L  ++QRLQ  HSH*I SWP+* V SPSPDGCSTRFLHSTCKIYVMWSPPL*SQLFLICLGHKMDSCLSGLTSGSYQHQSSDVLYL*PHQIARFQLCQIHQ H SARLLHLHP*HL
Subject   2249  LELF*FHPLAQAHSHL*LPRKNQRLQTFHSH*ILSWPS*LVVSPSPDGCSTRFLHSTCKIYVMWSPPL*SQLFLICLGHKMDSCLSGLTSGSYQHQSSDVLYL*PHQIARFQLCQIHQMHESARLLHLHP*HL  2647

Range 5: 2249 to 2647 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
266.8 bits(576) 0.0 117/133(88%) 0/133(0%) Minus/Plus
Query        6  QMSWMKVQ*TS*YVRLVNLA*LKACNLMWL*I*HVTALMLVAPRGQP**ARVHFVT*TDQK*LGL*GR*PHYVDFACTMQKSCGTSIWRRGFHPLIGPRRDLMRMRNLQPLTSSLESQMRARLNRRVALRELQ  404
                QMSWMKVQ*TS*+V LVNLA*LKACNLMWL*I*HVTALMLVAPRGQP**ARVHFVT*TDQK*LGL*GR*PHYVDFACTMQKSCGTSIWRRG+H L GPR+DLMRM++LQPL  S ESQMR RL++RV L+ELQ
Subject   2249  QMSWMKVQ*TS*FVHLVNLA*LKACNLMWL*I*HVTALMLVAPRGQP**ARVHFVT*TDQK*LGL*GR*PHYVDFACTMQKSCGTSIWRRGYHQLTGPRKDLMRMKSLQPLIFSWESQMRVRLSQRVELKELQ  2647

Range 6: 2301 to 2648 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
264.5 bits(571) 0.0 114/116(98%) 0/116(0%) Plus/Minus
Query        5  VGALLMPPFGSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRWMFHTIFA*YMQNLRNVVTSLIIPAISDLFRSQNGLLPIRVDLWELPTSEQ*RAISIATSNCTLSAMPD  352
                VGALL+PPFGSSALSSVTP+KKSKAANFSFSLNPFLAQLAGGIPVSRWMFHTIFA*YMQNLRNVVTSLIIPAISDLFRSQNGLLPIRVDLWELPTSEQ*RAISIATSNCTLSAMPD
Subject   2301  VGALLIPPFGSSALSSVTPKKKSKAANFSFSLNPFLAQLAGGIPVSRWMFHTIFA*YMQNLRNVVTSLIIPAISDLFRSQNGLLPIRVDLWELPTSEQ*RAISIATSNCTLSAMPD  2648

Rupestris stem pitting associated virus partial CP gene for coat protein, genomic RNA, isolate RSPaV SB 09

Sequence ID: AM180417.1 Length: 617 Number of Matches: 6

Range 1: 204 to 605 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
320.9 bits(694) 0.0 133/134(99%) 0/134(0%) Minus/Plus
Query        1  DVMDEGAIDELIRAFGESGIAESVQFDVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGIKRAPTK  402
                +VMDEGAIDELIRAFGESGIAESVQFDVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGIKRAPTK
Subject    204  NVMDEGAIDELIRAFGESGIAESVQFDVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGIKRAPTK  605

Range 2: 204 to 605 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
292.5 bits(632) 0.0 118/134(88%) 0/134(0%) Plus/Minus
Query        1  FGWSSLNATLRFKRALICDSKEEVKGCKFLILIKSLLGPISGWNPRLQMDVPHDFCIVHAKST*CGHLPYNPSYF*SV*VTKWTLAYQG*PLGATNIRAVTCYIYSHIKLHAFSYARFTKRTYQLVYCTFIHDI  402
                F WSS N+TL FKR LICDS+E++KGCK  ILIKS LGP+S W PRLQMDVPHDFCIVHAKST*CGHLPYNPSYF*SV*VTKWTLAYQG*PLGATNIRAVTCYIYSHIKLHAFSYARFTK T QLVYCTFIHDI
Subject    204  FCWSSFNSTLWFKRTLICDSQEKIKGCKLFILIKSFLGPVSWWYPRLQMDVPHDFCIVHAKST*CGHLPYNPSYF*SV*VTKWTLAYQG*PLGATNIRAVTCYIYSHIKLHAFSYARFTKCTNQLVYCTFIHDI  605

Range 3: 203 to 604 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
279.2 bits(603) 0.0 117/134(87%) 0/134(0%) Minus/Plus
Query        2  RCHG*RCNRRADTCVW*IWHS*KRAI*CGYRYSTSLL*CW*LPEVNPDRQESIL*PKQIRNSWDYKGGDHIT*ILHVLCKNRVEHPSGDGDSTR*LGQEGI**E*EICSL*LLPWSHR*ERA*TEGWH*ESSNQ  403
                +CHG*RCNRRAD+C+W*IWHS*KRAI*CGYRYSTSLL*CW*LPEVNPDRQESIL*PKQIRNSWDYKGGDHIT*ILHVLCKNRVEHPSGDGD+T *LGQE I**E*++CSL*    SHR*E A*T+GW+*+SSN+
Subject    203  KCHG*RCNRRADSCIW*IWHS*KRAI*CGYRYSTSLL*CW*LPEVNPDRQESIL*PKQIRNSWDYKGGDHIT*ILHVLCKNRVEHPSGDGDTTS*LGQERI**E*KVCSL*FFLGSHR*ECA*TKGWN*KSSNK  604

Range 4: 202 to 600 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
275.5 bits(595) 0.0 117/133(88%) 0/133(0%) Plus/Minus
Query        6  LELS*CHPSVQARSHL*LQGRSQRLQISHSH*IPSWPN*RVESPSPDGCSTRFLHSTCKIYVMWSPPL*SQLFLICLGHKMDSCLSGLTSGSYQHQSSDVLYL*PHQIARFQLCQIHQTHVSARLLHLHP*HL  404
                LEL * HP VQA SHL*L  ++QRLQ  HSH*I SWP+* V SPSPDGCSTRFLHSTCKIYVMWSPPL*SQLFLICLGHKMDSCLSGLTSGSYQHQSSDVLYL*PHQIARFQLCQIHQ H SARLLHLHP*HL
Subject    202  LELF*FHPLVQAHSHL*LPRKNQRLQTFHSH*ILSWPS*LVVSPSPDGCSTRFLHSTCKIYVMWSPPL*SQLFLICLGHKMDSCLSGLTSGSYQHQSSDVLYL*PHQIARFQLCQIHQMHESARLLHLHP*HL  600

Range 5: 202 to 600 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
269.1 bits(581) 0.0 118/133(89%) 0/133(0%) Minus/Plus
Query        6  QMSWMKVQ*TS*YVRLVNLA*LKACNLMWL*I*HVTALMLVAPRGQP**ARVHFVT*TDQK*LGL*GR*PHYVDFACTMQKSCGTSIWRRGFHPLIGPRRDLMRMRNLQPLTSSLESQMRARLNRRVALRELQ  404
                QMSWMKVQ*TS*+V LVNLA*LKACNLMWL*I*HVTALMLVAPRGQP**ARVHFVT*TDQK*LGL*GR*PHYVDFACTMQKSCGTSIWRRG+H L GPR+DLMRM++LQPL  S ESQMR RLN+RV L+ELQ
Subject    202  QMSWMKVQ*TS*FVHLVNLA*LKACNLMWL*I*HVTALMLVAPRGQP**ARVHFVT*TDQK*LGL*GR*PHYVDFACTMQKSCGTSIWRRGYHQLTGPRKDLMRMKSLQPLIFSWESQMRVRLNQRVELKELQ  600

Range 6: 254 to 601 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
264.5 bits(571) 0.0 114/116(98%) 0/116(0%) Plus/Minus
Query        5  VGALLMPPFGSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRWMFHTIFA*YMQNLRNVVTSLIIPAISDLFRSQNGLLPIRVDLWELPTSEQ*RAISIATSNCTLSAMPD  352
                VGALL+PPFGSSALSSVTP+KKSKAANFSFSLNPFLAQLAGGIPVSRWMFHTIFA*YMQNLRNVVTSLIIPAISDLFRSQNGLLPIRVDLWELPTSEQ*RAISIATSNCTLSAMPD
Subject    254  VGALLIPPFGSSALSSVTPKKKSKAANFSFSLNPFLAQLAGGIPVSRWMFHTIFA*YMQNLRNVVTSLIIPAISDLFRSQNGLLPIRVDLWELPTSEQ*RAISIATSNCTLSAMPD  601

Rupestris stem pitting associated virus partial CP gene for coat protein, genomic RNA, isolate RSPaV EM

Sequence ID: AM180419.1 Length: 670 Number of Matches: 6

Range 1: 204 to 605 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
320.9 bits(694) 0.0 133/134(99%) 0/134(0%) Minus/Plus
Query        1  DVMDEGAIDELIRAFGESGIAESVQFDVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGIKRAPTK  402
                +VMDEGAIDELIRAFGESGIAESVQFDVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGIKRAPTK
Subject    204  NVMDEGAIDELIRAFGESGIAESVQFDVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGIKRAPTK  605

Range 2: 204 to 605 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
285.2 bits(616) 0.0 115/134(86%) 0/134(0%) Plus/Minus
Query        1  FGWSSLNATLRFKRALICDSKEEVKGCKFLILIKSLLGPISGWNPRLQMDVPHDFCIVHAKST*CGHLPYNPSYF*SV*VTKWTLAYQG*PLGATNIRAVTCYIYSHIKLHAFSYARFTKRTYQLVYCTFIHDI  402
                F WSS N+TL FKR LICDS+E++KGCK  ILIKS LGP+S W PRLQMDVPHDFCIVHAKS *CGHLP NPSYF*SV*VTKWTLAYQG*PLGATN+RAVTCYIYSHIKLHAFSYARFTK T QLVYCTFIHDI
Subject    204  FRWSSFNSTLWFKRTLICDSQEKIKGCKLFILIKSFLGPVSWWYPRLQMDVPHDFCIVHAKSP*CGHLPDNPSYF*SV*VTKWTLAYQG*PLGATNVRAVTCYIYSHIKLHAFSYARFTKCTNQLVYCTFIHDI  605

Range 3: 203 to 604 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
270.0 bits(583) 0.0 114/134(85%) 0/134(0%) Minus/Plus
Query        2  RCHG*RCNRRADTCVW*IWHS*KRAI*CGYRYSTSLL*CW*LPEVNPDRQESIL*PKQIRNSWDYKGGDHIT*ILHVLCKNRVEHPSGDGDSTR*LGQEGI**E*EICSL*LLPWSHR*ERA*TEGWH*ESSNQ  403
                +CHG*RCNRRAD+C+W*IWHS*KRAI*CGYRYSTSLL* W*LPEVNPDRQESIL*PKQIRNSWDY+GGDHIT ILHVLCKNRVEHPSGDGD+T *LGQE I**E*++CSL*    SHR*E A*T+GW+*+SSN+
Subject    203  KCHG*RCNRRADSCIW*IWHS*KRAI*CGYRYSTSLL*RW*LPEVNPDRQESIL*PKQIRNSWDYQGGDHITEILHVLCKNRVEHPSGDGDTTS*LGQERI**E*KVCSL*FFLGSHR*ECA*TKGWN*KSSNE  604

Range 4: 254 to 601 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
264.5 bits(571) 0.0 114/116(98%) 0/116(0%) Plus/Minus
Query        5  VGALLMPPFGSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRWMFHTIFA*YMQNLRNVVTSLIIPAISDLFRSQNGLLPIRVDLWELPTSEQ*RAISIATSNCTLSAMPD  352
                VGALL+PPFGSSALSSVTP+KKSKAANFSFSLNPFLAQLAGGIPVSRWMFHTIFA*YMQNLRNVVTSLIIPAISDLFRSQNGLLPIRVDLWELPTSEQ*RAISIATSNCTLSAMPD
Subject    254  VGALLIPPFGSSALSSVTPKKKSKAANFSFSLNPFLAQLAGGIPVSRWMFHTIFA*YMQNLRNVVTSLIIPAISDLFRSQNGLLPIRVDLWELPTSEQ*RAISIATSNCTLSAMPD  601

Range 5: 202 to 600 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
264.1 bits(570) 0.0 114/133(86%) 0/133(0%) Plus/Minus
Query        6  LELS*CHPSVQARSHL*LQGRSQRLQISHSH*IPSWPN*RVESPSPDGCSTRFLHSTCKIYVMWSPPL*SQLFLICLGHKMDSCLSGLTSGSYQHQSSDVLYL*PHQIARFQLCQIHQTHVSARLLHLHP*HL  404
                LEL * HP VQA SHL*L  ++QRLQ  HSH*I SWP+* V SPSPDGCSTRFLHSTCKI VMWSPP *SQLFLICLGHKMDSCLSGLTSGSYQ QSSDVLYL*PHQIARFQLCQIHQ H SARLLHLHP*HL
Subject    202  LELF*FHPLVQAHSHL*LPRKNQRLQTFHSH*ILSWPS*LVVSPSPDGCSTRFLHSTCKISVMWSPP**SQLFLICLGHKMDSCLSGLTSGSYQRQSSDVLYL*PHQIARFQLCQIHQMHESARLLHLHP*HL  600

Range 6: 202 to 600 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
260.9 bits(563) 0.0 115/133(86%) 0/133(0%) Minus/Plus
Query        6  QMSWMKVQ*TS*YVRLVNLA*LKACNLMWL*I*HVTALMLVAPRGQP**ARVHFVT*TDQK*LGL*GR*PHYVDFACTMQKSCGTSIWRRGFHPLIGPRRDLMRMRNLQPLTSSLESQMRARLNRRVALRELQ  404
                QMSWMKVQ*TS*+V LVNLA*LKACNLMWL*I*HVTAL LVAPRGQP**ARVHFVT*TDQK*LGL GR*PHY DFACTMQKSCGTSIWRRG+H L GPR+DLMRM++LQPL  S ESQMR RLN+RV L+ELQ
Subject    202  QMSWMKVQ*TS*FVHLVNLA*LKACNLMWL*I*HVTALTLVAPRGQP**ARVHFVT*TDQK*LGLSGR*PHYGDFACTMQKSCGTSIWRRGYHQLTGPRKDLMRMKSLQPLIFSWESQMRVRLNQRVELKELQ  600

Rupestris stem pitting associated virus partial CP gene for coat protein, genomic RNA, isolate RSPaV ND

Sequence ID: AM180421.1 Length: 670 Number of Matches: 6

Range 1: 204 to 605 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
320.9 bits(694) 0.0 133/134(99%) 0/134(0%) Minus/Plus
Query        1  DVMDEGAIDELIRAFGESGIAESVQFDVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGIKRAPTK  402
                +VMDEGAIDELIRAFGESGIAESVQFDVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGIKRAPTK
Subject    204  NVMDEGAIDELIRAFGESGIAESVQFDVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGIKRAPTK  605

Range 2: 204 to 605 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
289.7 bits(626) 0.0 116/134(87%) 0/134(0%) Plus/Minus
Query        1  FGWSSLNATLRFKRALICDSKEEVKGCKFLILIKSLLGPISGWNPRLQMDVPHDFCIVHAKST*CGHLPYNPSYF*SV*VTKWTLAYQG*PLGATNIRAVTCYIYSHIKLHAFSYARFTKRTYQLVYCTFIHDI  402
                F WSS N+TL  KR LICDS+E++KGCK  ILIKS LGP+S W PRLQMDVPHDFCIVHAKST*CGHLPYNPSYF*SV*VTKWTLAYQG*PLGATN+RAVTCYIYSHIKLHAFSYARFTK T QLVYCTFIHDI
Subject    204  FRWSSFNSTLWLKRTLICDSQEKIKGCKLFILIKSFLGPVSWWYPRLQMDVPHDFCIVHAKST*CGHLPYNPSYF*SV*VTKWTLAYQG*PLGATNVRAVTCYIYSHIKLHAFSYARFTKCTNQLVYCTFIHDI  605

Range 3: 203 to 604 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
271.9 bits(587) 0.0 115/134(86%) 0/134(0%) Minus/Plus
Query        2  RCHG*RCNRRADTCVW*IWHS*KRAI*CGYRYSTSLL*CW*LPEVNPDRQESIL*PKQIRNSWDYKGGDHIT*ILHVLCKNRVEHPSGDGDSTR*LGQEGI**E*EICSL*LLPWSHR*ERA*TEGWH*ESSNQ  403
                +CHG*RCNRRAD+C+W*IWHS*KRAI*CGYRYSTSLL* W*LPEVNPDRQESIL*PKQIRNSWDYKGGDHIT*ILHVLCKNRVEHPSGDGD+T *LGQE I**E*++CSL*    SHR*E A* +GW+*+SSN+
Subject    203  KCHG*RCNRRADSCIW*IWHS*KRAI*CGYRYSTSLL*RW*LPEVNPDRQESIL*PKQIRNSWDYKGGDHIT*ILHVLCKNRVEHPSGDGDTTS*LGQERI**E*KVCSL*FFLGSHR*ECA*AKGWN*KSSNE  604

Range 4: 202 to 600 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
270.0 bits(583) 0.0 115/133(86%) 0/133(0%) Plus/Minus
Query        6  LELS*CHPSVQARSHL*LQGRSQRLQISHSH*IPSWPN*RVESPSPDGCSTRFLHSTCKIYVMWSPPL*SQLFLICLGHKMDSCLSGLTSGSYQHQSSDVLYL*PHQIARFQLCQIHQTHVSARLLHLHP*HL  404
                LEL * HP  QA SHL*L  ++QRLQ  HSH*I SWP+* V SPSPDGCSTRFLHSTCKIYVMWSPPL*SQLFLICLGHKMDSCLSGLTSGSYQ QSSDVLYL*PHQIARFQLCQIHQ H SARLLHLHP*HL
Subject    202  LELF*FHPLAQAHSHL*LPRKNQRLQTFHSH*ILSWPS*LVVSPSPDGCSTRFLHSTCKIYVMWSPPL*SQLFLICLGHKMDSCLSGLTSGSYQRQSSDVLYL*PHQIARFQLCQIHQMHESARLLHLHP*HL  600

Range 5: 254 to 601 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
264.5 bits(571) 0.0 114/116(98%) 0/116(0%) Plus/Minus
Query        5  VGALLMPPFGSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRWMFHTIFA*YMQNLRNVVTSLIIPAISDLFRSQNGLLPIRVDLWELPTSEQ*RAISIATSNCTLSAMPD  352
                VGALL+PPFGSSALSSVTP+KKSKAANFSFSLNPFLAQLAGGIPVSRWMFHTIFA*YMQNLRNVVTSLIIPAISDLFRSQNGLLPIRVDLWELPTSEQ*RAISIATSNCTLSAMPD
Subject    254  VGALLIPPFGSSALSSVTPKKKSKAANFSFSLNPFLAQLAGGIPVSRWMFHTIFA*YMQNLRNVVTSLIIPAISDLFRSQNGLLPIRVDLWELPTSEQ*RAISIATSNCTLSAMPD  601

Range 6: 202 to 600 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
264.1 bits(570) 0.0 116/133(87%) 0/133(0%) Minus/Plus
Query        6  QMSWMKVQ*TS*YVRLVNLA*LKACNLMWL*I*HVTALMLVAPRGQP**ARVHFVT*TDQK*LGL*GR*PHYVDFACTMQKSCGTSIWRRGFHPLIGPRRDLMRMRNLQPLTSSLESQMRARLNRRVALRELQ  404
                QMSWMKVQ*TS*+V LVNLA*LKACNLMWL*I*HVTAL LVAPRGQP**ARVHFVT*TDQK*LGL*GR*PHYVDFACTMQKSCGTSIWRRG+H L GPR+DLMRM++LQPL  S ESQMR RL++RV L+ELQ
Subject    202  QMSWMKVQ*TS*FVHLVNLA*LKACNLMWL*I*HVTALTLVAPRGQP**ARVHFVT*TDQK*LGL*GR*PHYVDFACTMQKSCGTSIWRRGYHQLTGPRKDLMRMKSLQPLIFSWESQMRVRLSQRVELKELQ  600

Nucleotide Sequence (468 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 10 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
47
94
141
188
235
282
329
376
423
468

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 6

Range 1: 5188 to 5526 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
279.2 bits(603) 0.0 113/113(100%) 0/113(0%) Plus/Plus
Query      130  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVP  468
                WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVP
Subject   5188  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVP  5526

Range 2: 5190 to 5525 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
264.1 bits(570) 0.0 109/112(97%) 0/112(0%) Minus/Minus
Query      132  GTFERKVSSKNFPYGFARLNFAAST*GLENFRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHRTSRCSFNAIFPTHLALVDSKLLNGIWVLN  467
                GTFERKVSSKNFPYGFARLNFAAST*G EN RRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PH TSRCSFNAIFPTHLALVDSKLLNGIWVLN
Subject   5190  GTFERKVSSKNFPYGFARLNFAAST*GFENLRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSKLLNGIWVLN  5525

Range 3: 5143 to 5526 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
248.5 bits(536) 0.0 103/128(80%) 0/128(0%) Minus/Minus
Query       85  WNLRKESVK*ELPVWLCAPQFCSFNLRLRKF*TFPDGHEEGYRIVTFMPWIYAFKSFTRVAQLLASSTPMFIKELLGRFITTSHFTVFLQCHLSNPPGPC*FQIT*WDMGFKPFLIRAFRLKFLNLAI  468
                WNL KESVK*+LP+WLCAP FCSF+LRL KF TFP+ HE+G+ I+TFM WIYAFKSFT +AQLLASSTP+FIKELLGRFITTSHFTVFLQ HLSNPPGP  FQ+T*WDMGFKPFLI  FRLK LN AI
Subject   5143  WNL*KESVK*KLPIWLCAP*FCSFDLRL*KFKTFPNSHEKGH*IITFMSWIYAFKSFTCIAQLLASSTPVFIKELLGRFITTSHFTVFLQRHLSNPPGPGRFQVT*WDMGFKPFLI*TFRLKLLNFAI  5526

Range 4: 5141 to 5524 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
245.8 bits(530) 0.0 103/128(80%) 0/128(0%) Minus/Minus
Query       83  EPSKGKCQVRTSRMALRASILQLQLEA*KILDVS*RP*GRLPNRYLYALDICFQIFHTRCSIARFFHTYVHQRTVGSFHNHIALHGVPSMPSFQPTWPLLIPNYLMGYGF*TIPHSSIQTQVPQPRNP  466
                EP KGKCQV+TS MALRA ILQL+LEA KI DVS*+P* R  N YLY LDICFQIFH  CSIARFFHT VHQRTVGSFHNHI+LHGVPS PSFQPTWP  IP+YLMGYGF*TIPH +IQTQ PQ RNP
Subject   5141  EPLKGKCQVKTSHMALRALILQLRLEALKI*DVS*QP*ERSLNHYLYVLDICFQIFHMHCSIARFFHTCVHQRTVGSFHNHISLHGVPSTPSFQPTWPWSIPSYLMGYGF*TIPHLNIQTQAPQLRNP  5524

Range 5: 5144 to 5524 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
229.3 bits(494) 0.0 103/127(81%) 0/127(0%) Plus/Plus
Query       86  IARLRNLSLNARMRNGLKPISH*VIWNQQGPGGLERWH*RNTVKCDVVMKRPNSSLMNIGVEEASN*ATRVKDLKAYIQGIKVTIR*PSSWPSGNV*NFLSLKLKLQN*GAQSHTGSSYLTLSFRRF  466
                IA+LR+LSLN +MRNGLKPISH*V WN+ GPGGLERW *RNTVK DVVMKRPNSSLMN GVEEASN*A  VKDLKAYIQ IKV I+*P SW  GNV NF SLK KLQN*GAQSH GS YLTLSF+RF
Subject   5144  IAKLRSLSLNVQMRNGLKPISH*VTWNRPGPGGLERWR*RNTVK*DVVMKRPNSSLMNTGVEEASN*AMHVKDLKAYIQDIKVMIQ*PFSWLLGNVLNFQSLKSKLQN*GAQSHMGSFYLTLSFQRF  5524

Range 6: 5130 to 5525 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
213.2 bits(459) 0.0 103/132(78%) 0/132(0%) Plus/Plus
Query       72  WVCLGLRG*GT*V*MLE*GMV*NPYPIK*FGINKGQVGWKDGIEGTP*SAMWL*NDPTVL**T*VWKKRAIEQRV*KI*KHISKA*R*RFGNLPHGRQETSKIF*ASS*SCKIEARKAIREVLT*HFPFEGS  467
                W   GLR *G *V*M +*GMV*NPYPIK* GI++GQVGWKDG+EGTP*S MWL*NDPTVL**T VWKKRAIEQ +*KI*KHISK *R* F +L HG  ETS IF ASS SCKI+ARKAI EV T*HFPF+GS
Subject   5130  WPR*GLRS*GA*V*MFK*GMV*NPYPIK*LGIDQGQVGWKDGVEGTP*SEMWL*NDPTVL**TQVWKKRAIEQCM*KI*KHISKT*R**FSDLSHGC*ETS*IFKASSRSCKIKARKAIWEVFT*HFPFKGS  5525

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 6

Range 1: 5143 to 5526 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
285.6 bits(617) 0.0 114/128(89%) 0/128(0%) Minus/Minus
Query       85  WNLRKESVK*ELPVWLCAPQFCSFNLRLRKF*TFPDGHEEGYRIVTFMPWIYAFKSFTRVAQLLASSTPMFIKELLGRFITTSHFTVFLQCHLSNPPGPC*FQIT*WDMGFKPFLIRAFRLKFLNLAI  468
                W+LRKESVK*+ P+WLCAPQFCSFNLRLR+F TFPD HEEG+ I+TFM WIYAFKSFT +AQ LASSTPMFIKELLGRFITTSHFTVFLQCHLSNPPGPC*FQIT*WDMGFKPFLIRAFRLKFLNLAI
Subject   5143  WDLRKESVK*KFPIWLCAPQFCSFNLRLREFKTFPDSHEEGH*IITFMSWIYAFKSFTCIAQFLASSTPMFIKELLGRFITTSHFTVFLQCHLSNPPGPC*FQIT*WDMGFKPFLIRAFRLKFLNLAI  5526

Range 2: 5188 to 5526 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
277.4 bits(599) 0.0 112/113(99%) 0/113(0%) Plus/Plus
Query      130  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVP  468
                WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSE+LSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVP
Subject   5188  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEKLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVP  5526

Range 3: 5141 to 5521 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
271.9 bits(587) 0.0 111/127(87%) 0/127(0%) Minus/Minus
Query       83  PSKGKCQVRTSRMALRASILQLQLEA*KILDVS*RP*GRLPNRYLYALDICFQIFHTRCSIARFFHTYVHQRTVGSFHNHIALHGVPSMPSFQPTWPLLIPNYLMGYGF*TIPHSSIQTQVPQPRNP  463
                PSKGKCQV+ S MALRASILQLQLEA +I DVS*+P*GR  N YLY LDICFQIFH  CSI+RFFHTYVHQRTVGSFHNHI+LHGVPSMPSFQPTWPLLIP+YLMGYGF*TIPHSSIQTQVPQPRNP
Subject   5141  PSKGKCQVKISHMALRASILQLQLEASRI*DVS*QP*GRSLNHYLYVLDICFQIFHMHCSISRFFHTYVHQRTVGSFHNHISLHGVPSMPSFQPTWPLLIPDYLMGYGF*TIPHSSIQTQVPQPRNP  5521

Range 4: 5190 to 5525 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
257.7 bits(556) 0.0 107/112(96%) 0/112(0%) Minus/Minus
Query      132  GTFERKVSSKNFPYGFARLNFAAST*GLENFRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHRTSRCSFNAIFPTHLALVDSKLLNGIWVLN  467
                GTFERKVSSKNFPYGFARLNFAAST*G EN RRFLTAMRKVTESLPLCLGYMLSNLSHALLN SLLPHLCSSKNCWVVS*PH TSRCSFNAIFPTHLALVDS+LLNGIWVLN
Subject   5190  GTFERKVSSKNFPYGFARLNFAAST*GFENLRRFLTAMRKVTESLPLCLGYMLSNLSHALLNFSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSRLLNGIWVLN  5525

Range 5: 5144 to 5521 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
249.4 bits(538) 0.0 112/126(89%) 0/126(0%) Plus/Plus
Query       86  IARLRNLSLNARMRNGLKPISH*VIWNQQGPGGLERWH*RNTVKCDVVMKRPNSSLMNIGVEEASN*ATRVKDLKAYIQGIKVTIR*PSSWPSGNV*NFLSLKLKLQN*GAQSHTGSSYLTLSFRR  463
                IARLRNLSLNARMRNGLKPISH*VIWNQQGPGGLERWH*RNTVK DVVMKRPNSSLMNIGVEEA N*A  VKDLKAYIQ IKV I+*PSSW SGNV N  SLKLKLQN*GAQSH G+ YLTLSFRR
Subject   5144  IARLRNLSLNARMRNGLKPISH*VIWNQQGPGGLERWH*RNTVK*DVVMKRPNSSLMNIGVEEARN*AMHVKDLKAYIQDIKVMIQ*PSSWLSGNVLNSRSLKLKLQN*GAQSHMGNFYLTLSFRR  5521

Range 6: 5142 to 5522 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
233.4 bits(503) 0.0 111/127(87%) 0/127(0%) Plus/Plus
Query       84  GLRG*GT*V*MLE*GMV*NPYPIK*FGINKGQVGWKDGIEGTP*SAMWL*NDPTVL**T*VWKKRAIEQRV*KI*KHISKA*R*RFGNLPHGRQETSKIF*ASS*SCKIEARKAIREVLT*HFPFEG  464
                GLRG*GT*V*MLE*GMV*NPYPIK* GINKGQVGWKDGIEGTP*S MWL*NDPTVL**T*VWKKR IEQ +*KI*KHISK *R* F +LPHG QETS I  ASS*SCKIEARKAI E+ T*HFPFEG
Subject   5142  GLRG*GT*V*MLE*GMV*NPYPIK*SGINKGQVGWKDGIEGTP*SEMWL*NDPTVL**T*VWKKREIEQCM*KI*KHISKT*R**FSDLPHGCQETS*ILEASS*SCKIEARKAIWEIFT*HFPFEG  5522

Grapevine rupestris stem pitting associated virus isolate CS BR, complete genome

Sequence ID: KX958435.1 Length: 8743 Number of Matches: 7

Range 1: 5189 to 5527 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
268.7 bits(580) 0.0 109/113(96%) 0/113(0%) Plus/Plus
Query      130  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVP  468
                WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHR G  EQLSNACERFESIYPRHKGNDS+TFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVP
Subject   5189  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVP  5527

Range 2: 5191 to 5526 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
204.1 bits(439) 0.0 89/112(79%) 0/112(0%) Minus/Minus
Query      132  GTFERKVSSKNFPYGFARLNFAAST*GLENFRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHRTSRCSFNAIFPTHLALVDSKLLNGIWVLN  467
                GTF+RKVSS+NFP GFARL+FAAST G ENFRRF TA++KV ESLPLCLG MLS  S ALLNCS +P LCSSKNC VVS PHRTSRCSF AIFPTHLALVDSKLL G+ VLN
Subject   5191  GTFDRKVSSRNFP*GFARLSFAASTCGFENFRRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPIPPLCSSKNC*VVSYPHRTSRCSFKAIFPTHLALVDSKLLKGMCVLN  5526

Range 3: 5144 to 5527 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
124.3 bits(265) 0.0 61/128(48%) 0/128(0%) Minus/Minus
Query       85  WNLRKESVK*ELPVWLCAPQFCSFNLRLRKF*TFPDGHEEGYRIVTFMPWIYAFKSFTRVAQLLASSTPMFIKELLGRFITTSHFTVFLQCHLSNPPGPC*FQIT*WDMGFKPFLIRAFRLKFLNLAI  468
                W+ R ESVK E P+ LC P   SF+L L K   F DGH +G  ++  +  I AFK+FT +A LLA S P+FI+ELL  FI TS+ TV LQ H  NP  P * QI    + F+PF I   RLK  N  +
Subject   5144  WDFR*ESVKQEFPIRLCTP*LRSFHLWL*KLQAFSDGH*KGNGVIALVSRINAFKTFTGIA*LLAHSPPVFIEELLSCFIPTSYLTVLLQGHFPNPSSPG*LQIAQGYVCFEPFFI*TLRLKLFNFTV  5527

Range 4: 5151 to 5522 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
117.5 bits(250) 0.0 60/124(48%) 0/124(0%) Plus/Plus
Query       92  RLRNLSLNARMRNGLKPISH*VIWNQQGPGGLERWH*RNTVKCDVVMKRPNSSLMNIGVEEASN*ATRVKDLKAYIQGIKVTIR*PSSWPSGNV*NFLSLKLKLQN*GAQSHTGSSYLTLSFRR  463
                +L++LSL+ +M+NG K    * IW+Q G  GL +W *R+TV+ DV MK+ ++S MN G E ASN*A  V  LKA+I   +     P  WPS N *+F S + KL++*G QS  G+S LTLS+R+
Subject   5151  KLKSLSLSVQMKNGSKHTYP*AIWSQPGLDGLGKWP*RSTVRYDVGMKQLSNSSMNTGGEWASN*AMPVNVLKAFILDTRAMTPLPF*WPSENA*SFQSHRWKLRS*GVQSLMGNSCLTLSYRK  5522

Range 5: 5143 to 5379 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.5 bits(152) 0.0 37/79(47%) 0/79(0%) Plus/Plus
Query       84  GLRG*GT*V*MLE*GMV*NPYPIK*FGINKGQVGWKDGIEGTP*SAMWL*NDPTVL**T*VWKKRAIEQRV*KI*KHIS  320
                GL  *  *V*+ +* MV N + ++ FG+N+G +GW++G+EG P*  MW+*N+  +L *T     RAI+Q +*  *KH+S
Subject   5143  GL*S*RA*V*VFK*RMVQNTHTLEQFGVNQG*MGWENGLEGAP*GTMWV*NNSAILR*TQGGNGRAIKQCL*TF*KHLS  5379

Range 6: 5413 to 5520 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.6 bits(78) 0.0 16/36(44%) 0/36(0%) Plus/Plus
Query      354  HGRQETSKIF*ASS*SCKIEARKAIREVLT*HFPFE  461
                +GR +T ++F A+  SC+ +A KA+ E+  *HFP E
Subject   5413  NGRPKTPEVFKATGGSCEAKACKALWEIPA*HFPIE  5520

Range 7: 5142 to 5378 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
77.1 bits(162) 0.0 38/79(48%) 0/79(0%) Minus/Minus
Query       83  DICFQIFHTRCSIARFFHTYVHQRTVGSFHNHIALHGVPSMPSFQPTWPLLIPNYLMGYGF*TIPHSSIQTQVPQPRNP  319
                D CFQ  H  C IAR F   VH+R    FH HI  HG PS P  QP  P L PN      F*TI H + QTQ  Q  +P
Subject   5142  DKCFQNVHRHCLIARPFPPCVHRRIAELFHTHIVPHGAPSRPFSQPI*PWLTPNCSRVCVF*TILHLNTQTQALQLHSP  5378

Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome

Sequence ID: KR054734.1 Length: 8753 Number of Matches: 6

Range 1: 5188 to 5526 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
268.7 bits(580) 0.0 109/113(96%) 0/113(0%) Plus/Plus
Query      130  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVP  468
                WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHR G  EQLSNACERFESIYPRHKGNDS+TFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVP
Subject   5188  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVP  5526

Range 2: 5190 to 5525 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
199.5 bits(429) 0.0 86/112(77%) 0/112(0%) Minus/Minus
Query      132  GTFERKVSSKNFPYGFARLNFAAST*GLENFRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHRTSRCSFNAIFPTHLALVDSKLLNGIWVLN  467
                GTF++ VSS+NFP GFARL+FAAST G ENF+RF TA++KV ESLPLCLG MLSNLS ALLNCS +P LCSSKNC VVS P RTSRCSF AIFPTHLALVDS+LL G+ VLN
Subject   5190  GTFDKNVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSNLSQALLNCSPIPPLCSSKNC*VVSYPQRTSRCSFKAIFPTHLALVDSRLLKGMCVLN  5525

Range 3: 5143 to 5526 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.9 bits(240) 0.0 56/128(44%) 0/128(0%) Minus/Minus
Query       85  WNLRKESVK*ELPVWLCAPQFCSFNLRLRKF*TFPDGHEEGYRIVTFMPWIYAFKSFTRVAQLLASSTPMFIKELLGRFITTSHFTVFLQCHLSNPPGPC*FQIT*WDMGFKPFLIRAFRLKFLNLAI  468
                WN  ++ VK +  + LCAP  CS +L L K *T PD H +   I+T M  + AFKSFT +A LLA +  +FI+ELL   I  +H TV  Q H  +P  P * QI    + F+PF I   RLK  N  I
Subject   5143  WNF*QKCVKQKFSIRLCAP*LCSLHLWL*KL*TLPDSH*KSDGIITLMSRVNAFKSFTSIA*LLAHTPSVFIEELLSCLIPATHLTVLFQGHFPDPSSPG*LQIAQGYVCFEPFFI*TLRLKLFNFTI  5526

Range 4: 5144 to 5524 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.9 bits(216) 0.0 57/127(45%) 0/127(0%) Plus/Plus
Query       86  IARLRNLSLNARMRNGLKPISH*VIWNQQGPGGLERWH*RNTVKCDVVMKRPNSSLMNIGVEEASN*ATRVKDLKAYIQGIKVTIR*PSSWPSGNV*NFLSLKLKLQN*GAQSHTGSSYLTLSFRRF  466
                I +L++LSL+ +M+NG K    * IW+Q G  G  +W *++TV+C   M++ +SS MN     ASN*A  VKDLKA+   I+V I     W SG+V*+F S K +LQ+*GAQS   +  LT   ++F
Subject   5144  IVKLKSLSLSVQMKNGSKHTYP*AIWSQPGLDGSGKWP*KSTVRCVAGMRQLSSSSMNTEGVWASN*AMLVKDLKAFTLDIRVMIPSLF*WLSGSV*SFQSHKWRLQS*GAQSLMENFCLTHFCQKF  5524

Range 5: 5144 to 5506 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
85.8 bits(181) 0.0 51/121(42%) 0/121(0%) Minus/Minus
Query       86  CQVRTSRMALRASILQLQLEA*KILDVS*RP*GRLPNRYLYALDICFQIFHTRCSIARFFHTYVHQRTVGSFHNHIALHGVPSMPSFQPTWPLLIPNYLMGYGF*TIPHSSIQTQVPQPRN  448
                CQ      ALRA  LQ  L A K L+ S +P  +  N Y Y    CFQIFH  C IAR +   VH+RT    H   A HG  S P  +P  P L P+      F*TI H + QTQ  Q  N
Subject   5144  CQAEIFHKALRALALQPPLVALKTLNASGQPLKK*WNHYPYV*GKCFQIFHKHCLIARPYPLCVHRRTAELSHTRNAPHGALSRPFSRPI*PWLTPDCSRVCVF*TILHLNTQTQALQLHN  5506

Range 6: 5163 to 5507 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.8 bits(159) 0.0 48/115(42%) 0/115(0%) Plus/Plus
Query      105  *V*MLE*GMV*NPYPIK*FGINKGQVGWKDGIEGTP*SAMWL*NDPTVL**T*VWKKRAIEQRV*KI*KHISKA*R*RFGNLPHGRQETSKIF*ASS*SCKIEARKAIREVLT*H  449
                *V*+ +* MV N + ++  G+N+G +G ++G+E  P* A+ +*++  VL *T     RAI+Q +*KI*KH+   * * F +  +G  E  K+F A+S  CK +ARKA+ ++  *H
Subject   5163  *V*VFK*RMVQNTHTLEQSGVNQG*MGRENGLERAP*GALRV*DNSAVLR*TQRGYGRAIKQCL*KI*KHLP*T*G**FHHFFNGCPEAFKVFKATSGGCKAKARKALWKISA*H  5507

Grapevine rupestris stem pitting associated virus isolate VF1, partial genome

Sequence ID: KT948710.1 Length: 8716 Number of Matches: 7

Range 1: 5189 to 5527 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
265.9 bits(574) 0.0 108/113(96%) 0/113(0%) Plus/Plus
Query      130  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVP  468
                WFKTHIPLSNLESTRARWVGKMALKE+REVRCGYETTQQFFDEHR G  EQLSNACERFESIYPRHKGNDS+TFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVP
Subject   5189  WFKTHIPLSNLESTRARWVGKMALKEYREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVP  5527

Range 2: 5191 to 5526 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
196.3 bits(422) 0.0 86/112(77%) 0/112(0%) Minus/Minus
Query      132  GTFERKVSSKNFPYGFARLNFAAST*GLENFRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHRTSRCSFNAIFPTHLALVDSKLLNGIWVLN  467
                GTF+RKVSS+NFP GFARL+FAAST G ENF+RF TA++KV ESLPLCLG MLS  S ALLNCS +P LCSSKNC VVS PHRTSR SF AIFPTHLALVDS+LL G+ VLN
Subject   5191  GTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVIESLPLCLG*MLSKRSQALLNCSPIPPLCSSKNC*VVSYPHRTSRYSFKAIFPTHLALVDSRLLKGMCVLN  5526

Range 3: 5144 to 5527 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
117.5 bits(250) 0.0 56/128(44%) 0/128(0%) Minus/Minus
Query       85  WNLRKESVK*ELPVWLCAPQFCSFNLRLRKF*TFPDGHEEGYRIVTFMPWIYAFKSFTRVAQLLASSTPMFIKELLGRFITTSHFTVFLQCHLSNPPGPC*FQIT*WDMGFKPFLIRAFRLKFLNLAI  468
                W+   E VK E P+ LC P   SF+L L +   FPDGH++G R++  M  I A K+FT +AQLLA   P+FI+ELL   I TS+ TV  Q H  NP  P * QI    + F+PF I     K  N  +
Subject   5144  WDF**EGVKQEFPIRLCTP*LRSFHLWL*ELQAFPDGHQKGDRVIALMSRINALKTFTSIAQLLAHPPPVFIEELLSCLIPTSYLTVLFQGHFPNPSSPG*LQIAQRYVCFEPFFI*TLSFKLFNFTV  5527

Range 4: 5151 to 5522 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
105.1 bits(223) 0.0 54/124(44%) 0/124(0%) Plus/Plus
Query       92  RLRNLSLNARMRNGLKPISH*VIWNQQGPGGLERWH*RNTVKCDVVMKRPNSSLMNIGVEEASN*ATRVKDLKAYIQGIKVTIR*PSSWPSGNV*NFLSLKLKLQN*GAQSHTGSSYLTLSFRR  463
                +L++L L+ +M+NG K    * IW+Q G  GL +W *++TV+ DV M++ ++S MN G   ASN*A  V  L+A+I  I+     P  WPSGN *+  S + KL++*G QS  G+S LT S+++
Subject   5151  KLKSLKLSVQMKNGSKHTYL*AIWSQPGLDGLGKWP*KSTVRYDVGMRQLSNSSMNTGGGWASN*AMLVNVLRAFILDIRAMTLSPF*WPSGNA*SSQSHRWKLRS*GVQSLMGNSCLTPSYQK  5522

Range 5: 5154 to 5513 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.9 bits(155) 0.0 48/120(40%) 0/120(0%) Minus/Minus
Query       95  GKCQVRTSRMALRASILQLQLEA*KILDVS*RP*GRLPNRYLYALDICFQIFHTRCSIARFFHTYVHQRTVGSFHNHIALHGVPSMPSFQPTWPLLIPNYLMGYGF*TIPHSSIQTQVPQ  454
                G+CQ   S  AL A   QL   A +   VS RP  R  +   Y  D C Q  H  CSIAR     VH+R     H HI  HG  S P  QP  P L P+      F*TI H + Q Q  Q
Subject   5154  GRCQAGISHKALHALASQLPPVALRTSSVSGRPSKR**SHCPYV*DKCSQNVHKHCSIARPSPPCVHRRIAELSHTHIVPHGTLSRPFSQPI*PWLTPDCSKVCVF*TILHLNTQLQALQ  5513

Range 6: 5170 to 5379 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.0 bits(118) 0.0 29/70(41%) 0/70(0%) Plus/Plus
Query      111  *MLE*GMV*NPYPIK*FGINKGQVGWKDGIEGTP*SAMWL*NDPTVL**T*VWKKRAIEQRV*KI*KHIS  320
                *+ +* MV N +  +  G+N+G +GW++G+E  P*  MW+*++  +L *T     RAIEQ +*  *+H+S
Subject   5170  *VFK*RMVQNTHTFEQSGVNQG*MGWENGLERVP*GTMWV*DNSAILR*TQGGDGRAIEQCL*TF*EHLS  5379

Range 7: 5416 to 5520 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
32.2 bits(64) 0.0 14/35(40%) 0/35(0%) Plus/Plus
Query      357  GRQETSKIF*ASS*SCKIEARKAIREVLT*HFPFE  461
                GR ET ++  A+  SC+ +A KA+ E+  *H P +
Subject   5416  GRPETLEVLKATGGSCEAKACKALWEIPA*HLPIK  5520

Nucleotide Sequence (348 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 10 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
35
70
105
140
175
210
245
280
315
348

Descriptions

Alignments

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 6

Range 1: 7009 to 7353 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
257.2 bits(555) 0.0 103/115(90%) 0/115(0%) Minus/Plus
Query        2  IIGSPFELAVEGVLICFGKEAVDLAVAHNSNFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSTTCKLGQNCHSVDDRLGHWLGAAFPKKVKFAIL  346
                I GSPFEL VEGVLICFGKEAV+LA AHNS+FKLPCEVRG TFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*+AFS TC+LGQNC+S+DDRLGHWLGAAFPKKVKFA+L
Subject   7009  ITGSPFELDVEGVLICFGKEAVNLAAAHNSDFKLPCEVRGTTFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*DAFSATCELGQNCYSIDDRLGHWLGAAFPKKVKFAVL  7353

Range 2: 7008 to 7352 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
238.0 bits(513) 0.0 101/115(88%) 0/115(0%) Plus/Minus
Query        3  SMANLTFLGNAAPSQCPSLSSTE*QFWPNLQVVEKAFHCMIINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKLELCATAKSTASFPKQIRTPSTANSNGEPII  347
                S ANLTFLGNAAPSQCPSLSS E*QFWPN QV EKA HCM+INFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNV PRTSQGSLK ELCA AK TAS PKQI TPST+NSNGEP+I
Subject   7008  STANLTFLGNAAPSQCPSLSSME*QFWPNSQVAEKASHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVVPRTSQGSLKSELCAAAKLTASLPKQISTPSTSNSNGEPVI  7352

Range 3: 7009 to 7353 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
219.6 bits(473) 0.0 96/115(83%) 0/115(0%) Plus/Minus
Query        2  EYGKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDYQLLSMSCCSNVEPVLIIRGRIS*FQ*GDNIKCGTSYLTRKFEVGIMRNRQINCLLSKTN*DALHS*LKR*ANN  346
                EYGKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHD QLL MSCCSNVEPVLIIRGRIS*FQ*G+NIKC TSYLTRKFE+ IMR+ Q+NCLL+K N*  L+  LK *  N
Subject   7009  EYGKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDDQLLPMSCCSNVEPVLIIRGRIS*FQ*GNNIKCSTSYLTRKFEI*IMRSCQVNCLLAKAN*HTLNIQLKW*TCN  7353

Range 4: 7007 to 7354 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
218.3 bits(470) 0.0 98/116(84%) 0/116(0%) Minus/Plus
Query        1  *LLAHRLS*LWRAS*FVLERRQLIWRLRIIPTSNFLVRYEVPHLMLSPY*NQEIRPLMISTGSTLLQQDIERS**SCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNLPYS  348
                *L  H LS + R  *F L RRQL W+LRII  SNFLVRYEV HLML PY*NQEIRPLMISTGSTLLQQDI RS* SCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNLPYS
Subject   7007  *LQVHHLSWMLRVC*FALARRQLTWQLRIIQISNFLVRYEVLHLMLLPY*NQEIRPLMISTGSTLLQQDIGRS*SSCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNLPYS  7354

Range 5: 7007 to 7354 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
191.7 bits(412) 0.0 92/116(79%) 0/116(0%) Plus/Minus
Query        1  *VWQI*LS*EMQHQANAQAYRQRSDSFGPICRLLKRHFTA*LSTSFYVLLQQCRTSAYHQRSDLLISIR*QHQMWHLVPHKEV*SWNYAQPPNQLPPFQNKLGRPPQLTQTVSQ*S  348
                *V QI*LS*EMQHQANAQAYRQ S+SFGPI RLLKRH TA* STS YVLLQQCRTSAYHQRSDLLISIR*QHQM +LVPHKEV*+ NYAQ P+ LPP Q+KL  P   TQ V+ *S
Subject   7007  *VRQI*LS*EMQHQANAQAYRQWSNSFGPIRRLLKRHLTA**STSSYVLLQQCRTSAYHQRSDLLISIR*QHQM*YLVPHKEV*NLNYAQLPS*LPPCQSKLAHPQHPTQMVNL*S  7354

Range 6: 7008 to 7280 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
163.7 bits(351) 0.0 70/91(77%) 0/91(0%) Minus/Plus
Query       75  DYWLTV*VSCGGRPNLFWKGGS*FGGCA*FQLQTSL*GTRCHI*CCHLIEIKRSDL***ALVLHCCNKT*KEVDNHAVKCLFNNLQIGPKL  347
                DY  T+*V C G  NL W+GGS* G CA*F+ QTSL*GTR +I*CC+LIEIKRSDL***ALVLHCCNKT*+EVD+HAV+CLF+NL+IGPKL
Subject   7008  DYRFTI*VGC*GCANLLWQGGS*LGSCA*FRFQTSL*GTRYYI*CCYLIEIKRSDL***ALVLHCCNKT*EEVDHHAVRCLFSNLRIGPKL  7280

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OB1

Sequence ID: AB277783.1 Length: 2876 Number of Matches: 7

Range 1: 1265 to 1609 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
251.7 bits(543) 0.0 103/115(90%) 0/115(0%) Minus/Plus
Query        2  IIGSPFELAVEGVLICFGKEAVDLAVAHNSNFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSTTCKLGQNCHSVDDRLGHWLGAAFPKKVKFAIL  346
                I GSPFEL VEGVLICFGKEAVDLA AHNS+FKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFS TC+LGQN H +DD LGHWL A+FPKKVKFAIL
Subject   1265  ITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPIDDWLGHWLSASFPKKVKFAIL  1609

Range 2: 1264 to 1608 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
232.0 bits(500) 0.0 100/115(87%) 0/115(0%) Plus/Minus
Query        3  SMANLTFLGNAAPSQCPSLSSTE*QFWPNLQVVEKAFHCMIINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKLELCATAKSTASFPKQIRTPSTANSNGEPII  347
                SMANLTFLGN A SQCPS SS  * FWPN QV EKAFHCM+INFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLK ELCA AKSTAS PKQI TPST+NSNGEP+I
Subject   1264  SMANLTFLGNEALSQCPSQSSMG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVI  1608

Range 3: 1263 to 1610 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
212.3 bits(457) 0.0 97/116(84%) 0/116(0%) Minus/Plus
Query        1  *LLAHRLS*LWRAS*FVLERRQLIWRLRIIPTSNFLVRYEVPHLMLSPY*NQEIRPLMISTGSTLLQQDIERS**SCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNLPYS  348
                *L A  LS + R  *F L RRQLI RLRIIP SNFLVRYEV HLML PY*NQ IRP MISTGSTLLQQDIER+* SCSEMPFQQPANWAKT+TPLTIGLGIGLVLHFLRKSNLPYS
Subject   1263  *LQARHLSWMLRVC*FALARRQLI*RLRIIPISNFLVRYEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIERN*SSCSEMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYS  1610

Range 4: 1280 to 1609 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
207.7 bits(447) 0.0 91/110(83%) 0/110(0%) Plus/Minus
Query        2  EYGKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDYQLLSMSCCSNVEPVLIIRGRIS*FQ*GDNIKCGTSYLTRKFEVGIMRNRQINCLLSKTN*DALHS*LK  331
                EYGKFDFLRK STKPMPKPIVNGV VLAQFAGC*KGISLHD Q LSMSCCSNVEPVLII GRI *FQ*G+NIKC TSYLTRKFE+GIMR+R INCLL+K N   L+  LK
Subject   1280  EYGKFDFLRK*STKPMPKPIVNGVIVLAQFAGC*KGISLHDDQFLSMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSYLTRKFEIGIMRSR*INCLLAKANQHTLNIQLK  1609

Range 5: 1263 to 1610 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
192.6 bits(414) 0.0 91/116(78%) 0/116(0%) Plus/Minus
Query        1  *VWQI*LS*EMQHQANAQAYRQRSDSFGPICRLLKRHFTA*LSTSFYVLLQQCRTSAYHQRSDLLISIR*QHQMWHLVPHKEV*SWNYAQPPNQLPPFQNKLGRPPQLTQTVSQ*S  348
                *VWQI*LS*EM+H ANAQA RQ  DSFGPI RLLKRHFTA* S SFYVLLQQCRTSAYH+RSD LISIR*QHQM HLVPHKEV*+ NYAQP NQLPP Q+K   P   TQ  S *S
Subject   1263  *VWQI*LS*EMKH*ANAQANRQWGDSFGPIRRLLKRHFTA**SISFYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLVPHKEV*NRNYAQPLNQLPPCQSKSAHPQHPTQMASL*S  1610

Range 6: 1264 to 1539 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
167.9 bits(360) 0.0 71/92(77%) 0/92(0%) Minus/Plus
Query       72  DYWLTV*VSCGGRPNLFWKGGS*FGGCA*FQLQTSL*GTRCHI*CCHLIEIKRSDL***ALVLHCCNKT*KEVDNHAVKCLFNNLQIGPKLS  347
                DY L +*V C G  +L W+GGS*F GCA*F+ QTSL*GTRC+I*CC+LIEIK SDL **ALVLHCCNKT*KE+D+HAVKCLF+NL+IGPKLS
Subject   1264  DYRLAI*VGC*GCADLLWQGGS*FSGCA*FRFQTSL*GTRCYI*CCYLIEIKGSDLR**ALVLHCCNKT*KEIDHHAVKCLFSNLRIGPKLS  1539

Range 7: 1579 to 1608 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.4 bits(49) 0.0 10/10(100%) 0/10(0%) Minus/Plus
Query        3  IS*ESQICHT  32
                IS*ESQICHT
Subject   1579  IS*ESQICHT  1608

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 6

Range 1: 7009 to 7350 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
248.0 bits(535) 0.0 103/114(90%) 0/114(0%) Minus/Plus
Query        5  IIGSPFELAVEGVLICFGKEAVDLAVAHNSNFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSTTCKLGQNCHSVDDRLGHWLGAAFPKKVKFAI  346
                I GSPFEL VEGVLICFGKEAVDLA AHNS+FKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFS TC+LGQN H VDD  GHWLGAAF KKVKFAI
Subject   7009  ITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPVDDWRGHWLGAAFSKKVKFAI  7350

Range 2: 7008 to 7352 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
234.3 bits(505) 0.0 100/115(87%) 0/115(0%) Plus/Minus
Query        3  SMANLTFLGNAAPSQCPSLSSTE*QFWPNLQVVEKAFHCMIINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKLELCATAKSTASFPKQIRTPSTANSNGEPII  347
                +MANLTFL NAAPSQCP  SST * FWPN QV EKAFHCM+INFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLK ELCA AKSTAS PKQI TPST+NSNGEP+I
Subject   7008  NMANLTFLENAAPSQCPRQSSTG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVI  7352

Range 3: 7024 to 7353 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
207.3 bits(446) 0.0 90/110(82%) 0/110(0%) Plus/Minus
Query        2  EYGKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDYQLLSMSCCSNVEPVLIIRGRIS*FQ*GDNIKCGTSYLTRKFEVGIMRNRQINCLLSKTN*DALHS*LK  331
                EYGKFDFLRKCSTKPMP PIVNGV VLAQFAGC*KGISLHD Q LSMSCCSNVEPVLII GRI *FQ*G+NIKC TS+LTRKFE+ IMR+R INCLL+K N*  L+  LK
Subject   7024  EYGKFDFLRKCSTKPMPTPIVNGVIVLAQFAGC*KGISLHDDQFLSMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSHLTRKFEIRIMRSR*INCLLAKAN*HTLNIQLK  7353

Range 4: 7007 to 7354 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
200.4 bits(431) 0.0 93/116(80%) 0/116(0%) Minus/Plus
Query        1  *LLAHRLS*LWRAS*FVLERRQLIWRLRIIPTSNFLVRYEVPHLMLSPY*NQEIRPLMISTGSTLLQQDIERS**SCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNLPYS  348
                *L    LS + R  *F L RRQLI RLRII  SNFLVR EV HLML PY*NQ IRP MISTGSTLLQQDIER+* SCSEMPFQQPANWAKT+TPLTIG+GIGLVLHFLRKSNLPYS
Subject   7007  *LQVRHLSWMLRVC*FALARRQLI*RLRIILISNFLVRCEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIERN*SSCSEMPFQQPANWAKTITPLTIGVGIGLVLHFLRKSNLPYS  7354

Range 5: 7007 to 7354 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
197.6 bits(425) 0.0 90/116(78%) 0/116(0%) Plus/Minus
Query        1  *VWQI*LS*EMQHQANAQAYRQRSDSFGPICRLLKRHFTA*LSTSFYVLLQQCRTSAYHQRSDLLISIR*QHQMWHLVPHKEV*SWNYAQPPNQLPPFQNKLGRPPQLTQTVSQ*S  348
                *+WQI*LS*+MQHQANA A RQR DSFGPI RLLKRHFTA* S SFYVLLQQCRTSAYH+RSD LISIR*QHQM HL PHKEV*+ NYAQP NQLPP Q+KL  P   TQ  + *S
Subject   7007  *IWQI*LS*KMQHQANAHANRQRGDSFGPIRRLLKRHFTA**SISFYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLAPHKEV*NQNYAQPLNQLPPCQSKLAHPQHPTQMANL*S  7354

Range 6: 7008 to 7283 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
163.7 bits(351) 0.0 70/92(76%) 0/92(0%) Minus/Plus
Query       72  DYWLTV*VSCGGRPNLFWKGGS*FGGCA*FQLQTSL*GTRCHI*CCHLIEIKRSDL***ALVLHCCNKT*KEVDNHAVKCLFNNLQIGPKLS  347
                DY   +*V C G  NL W+GGS*F GCA*F  QTSL*G RC+I*CC+LIEIK SDL **ALVLHCCNKT*KE+D+HAVKCLF+NL+IGPKLS
Subject   7008  DYRFAI*VGC*GCANLLWQGGS*FSGCA*F*FQTSL*GARCYI*CCYLIEIKGSDLR**ALVLHCCNKT*KEIDHHAVKCLFSNLRIGPKLS  7283

Rupestris stem pitting associated virus isolate RSP47 4 replicase gene, partial cds; triple gene block protein 1, triple gene block protein 2, and triple gene block protein 3 genes, complete cds; and capsid protein gene, partial cds

Sequence ID: EF105294.1 Length: 2680 Number of Matches: 7

Range 1: 1289 to 1630 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
219.6 bits(473) 0.0 88/114(77%) 0/114(0%) Minus/Plus
Query        5  IIGSPFELAVEGVLICFGKEAVDLAVAHNSNFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSTTCKLGQNCHSVDDRLGHWLGAAFPKKVKFAI  346
                ++GSPFEL VEGVLICFGKEAVDLAVAHNS+FKLPCEVRG+TFDVVTLLKSRDPTS+DKHWFY+AATRHR KLIIMQ*NAFS TC+LG + +S++   GHW+G+A  K++K AI
Subject   1289  VVGSPFELEVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFDVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*NAFSATCQLG*DHNSINYWFGHWVGSALLKEIKSAI  1630

Range 2: 1294 to 1551 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
161.4 bits(346) 0.0 67/86(78%) 0/86(0%) Plus/Minus
Query       84  PNLQVVEKAFHCMIINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKLELCATAKSTASFPKQIRTPSTANSNGEP  341
                P+ QV EKAF+C+II+   CLVAA *NQCLSSEVGSLDFN VTTSNV PRTSQG+LK ELCATA+STASFPKQ+RTPST++SNG+P
Subject   1294  PSWQVAEKAFYCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTSNVEPRTSQGNLKSELCATARSTASFPKQMRTPSTSSSNGDP  1551

Range 3: 1579 to 1632 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.9 bits(48) 0.0 9/18(50%) 0/18(0%) Plus/Minus
Query        3  SMANLTFLGNAAPSQCPS  56
                +MA+L  L +A P+QCP+
Subject   1579  NMADLISLRSAEPTQCPN  1632

Range 4: 1332 to 1634 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
135.3 bits(289) 0.0 67/101(66%) 0/101(0%) Minus/Plus
Query        1  FVLERRQLIWRLRIIPTSNFLVRYEVPHLMLSPY*NQEIRPLMISTGSTLLQQDIERS**SCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNLPYS  303
                F LERR  I +L  I TS+   R  V HL L  Y*+  I+   IS GSTL  Q IE +** CS+MPFQQPANWAKT+TPLTIGLGIGLVLHFLRKSNLPYS
Subject   1332  FALERRL*I*QLHTILTSSCPARCGVQHLTL*RY*SPGIQLQKISIGSTLQPQGIEVN***CSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYS  1634

Range 5: 1316 to 1633 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
133.0 bits(284) 0.0 63/106(59%) 0/106(0%) Plus/Minus
Query        2  EYGKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDYQLLSMSCCSNVEPVLIIRGRIS*FQ*GDNIKCGTSYLTRKFEVGIMRNRQINCLLSKTN*DALH  319
                EYG+FDFL+KC T PMPKPIVNGV VLAQ AGC*KGI LH YQ  SM C  NVEP+LI    I   Q*  N+KC T +L  + EV I+ N  I  LLSK N + L+
Subject   1316  EYGRFDFLKKCRTNPMPKPIVNGVMVLAQLAGC*KGILLHYYQFTSMPCGCNVEPMLIF*SWIPGLQ*RYNVKC*TPHLAGQLEVRIVCNC*IYSLLSKANENPLN  1633

Range 6: 1332 to 1634 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
85.4 bits(180) 0.0 48/101(48%) 0/101(0%) Plus/Minus
Query        1  *VWQI*LS*EMQHQANAQAYRQRSDSFGPICRLLKRHFTA*LSTSFYVLLQQCRTSAYHQRSDLLISIR*QHQMWHLVPHKEV*SWNYAQPPNQLPPFQNK  303
                *+WQI*  *E+Q+Q NAQ     S    P+ RLLKRHFTA LS  F  L  Q RT+AY  + D   SI  Q QM +  P +  *S N  Q  +  PPFQ+K
Subject   1332  *IWQI*FP*EVQNQPNAQTNS*WSYGLSPVGRLLKRHFTALLSVYFDALWLQRRTNAYLLKLDPWTSITLQRQMLNPAPRRAT*SQNCVQLLDLQPPFQSK  1634

Range 7: 1321 to 1551 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.3 bits(158) 0.0 37/77(48%) 0/77(0%) Minus/Plus
Query       84  GRPNLFWKGGS*FGGCA*FQLQTSL*GTRCHI*CCHLIEIKRSDL***ALVLHCCNKT*KEVDNHAVKCLFNNLQIG  314
                G  +L WKGG     C  F LQ +L G   +I* C++IE++ S+   *ALVL C +K  K  DN+AVKCLF+NL  G
Subject   1321  GGSHLLWKGGCRSSSCTQF*LQVALRGAGFNI*RCNVIEVQGSNFRR*ALVLRCSHKASK*TDNNAVKCLFSNLPTG  1551

Grapevine rupestris stem pitting associated virus isolate SK704 A, complete genome

Sequence ID: KX274274.1 Length: 8725 Number of Matches: 7

Range 1: 7009 to 7350 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
218.7 bits(471) 0.0 88/114(77%) 0/114(0%) Minus/Plus
Query        5  IIGSPFELAVEGVLICFGKEAVDLAVAHNSNFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSTTCKLGQNCHSVDDRLGHWLGAAFPKKVKFAI  346
                +IGSPFEL VEGVLICFGKEAVDLAVAHNS+FKLPCEVRG+TF+VVTLLKSRDPTS+DKHWFY+AATRHR KLIIMQ*+AF  TC+LG + +S++  LGHW+G+   +KVKFAI
Subject   7009  VIGSPFELDVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFNVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*DAFPATCQLG*DYNSINHWLGHWIGSTLLEKVKFAI  7350

Range 2: 7011 to 7271 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
153.7 bits(329) 0.0 65/87(75%) 0/87(0%) Plus/Minus
Query       84  PNLQVVEKAFHCMIINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKLELCATAKSTASFPKQIRTPSTANSNGEPI  344
                P+ QV  KA +C+II+   CLVAA *NQCLSSEVGSLDFN VTT NV PRTSQG+LK ELCATA+STASFPKQ+RTPST++SNG+PI
Subject   7011  PSWQVAGKASYCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTLNVEPRTSQGNLKSELCATARSTASFPKQMRTPSTSSSNGDPI  7271

Range 3: 7299 to 7352 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.0 bits(57) 0.0 11/18(61%) 0/18(0%) Plus/Minus
Query        3  SMANLTFLGNAAPSQCPS  56
                +MANLTF  +  P QCPS
Subject   7299  NMANLTFSRSVEPIQCPS  7352

Range 4: 7036 to 7353 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
146.3 bits(313) 0.0 65/106(61%) 0/106(0%) Plus/Minus
Query        2  EYGKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDYQLLSMSCCSNVEPVLIIRGRIS*FQ*GDNIKCGTSYLTRKFEVGIMRNRQINCLLSKTN*DALH  319
                EYGKFDFL+KC T PMPKP+VNGV VLAQ AGC KGI LH YQ  SM CC NVEP+LI    +   Q*  N+KC T +LT + EVGI+RN  I  LLSK N ++L+
Subject   7036  EYGKFDFLKKCRTNPMPKPMVNGVIVLAQLAGCWKGILLHYYQFASMPCCCNVEPMLIF*SWVPRLQ*RHNVKC*TPHLTGQLEVGIVRNC*IYGLLSKANENSLN  7353

Range 5: 7052 to 7354 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
145.4 bits(311) 0.0 70/101(69%) 0/101(0%) Minus/Plus
Query        1  FVLERRQLIWRLRIIPTSNFLVRYEVPHLMLSPY*NQEIRPLMISTGSTLLQQDIERS**SCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNLPYS  303
                F LERR  I +LR IPTS+  VR  V HL L  Y*+   +   IS GSTL QQ IE +** CS+MPFQQPANWAKT+TPLTIGLGIGLVLHFLRKSNLPYS
Subject   7052  FALERRP*I*QLRTIPTSSCPVRCGVQHLTL*RY*SLGTQLQKISIGSTLQQQGIEAN***CSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYS  7354

Range 6: 7011 to 7280 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.5 bits(178) 0.0 41/90(46%) 0/90(0%) Minus/Plus
Query       75  YWLTV*VSCGGRPNLFWKGGS*FGGCA*FQLQTSL*GTRCHI*CCHLIEIKRSDL***ALVLHCCNKT*KEVDNHAVKCLFNNLQIGPKL  344
                Y + +*  C G  +L WKGG     CA F+LQ +L*G   +I* C +IE+   +   *ALVL C NK  K+ DN+AV+CL +NL  G +L
Subject   7011  YRVAI*TGC*GSSHLLWKGGRRSSSCAQFRLQVAL*GAGFNI*RCDVIEV*GPNFRR*ALVLRCSNKASKQTDNNAVRCLSSNLPTGLRL  7280

Range 7: 7052 to 7354 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.6 bits(174) 0.0 49/101(49%) 0/101(0%) Plus/Minus
Query        1  *VWQI*LS*EMQHQANAQAYRQRSDSFGPICRLLKRHFTA*LSTSFYVLLQQCRTSAYHQRSDLLISIR*QHQMWHLVPHKEV*SWNYAQPPNQLPPFQNK  303
                *+WQI*LS E+ +Q+NAQA    S S  P+ RLL+RH TA LS  F  LL Q RT+AY  +     SI  Q  M +  PH+  *S N AQ  +  PPFQ+K
Subject   7052  *IWQI*LSQEV*NQSNAQANG*WSYSLSPVGRLLERHLTALLSVCFDALLLQRRTNAYLLKLGP*TSITSQR*MLNPAPHRAT*SRNCAQLLDLRPPFQSK  7354

Nucleotide Sequence (561 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 10 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
57
114
171
228
285
342
399
456
513
561

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus complete genome, isolate PG, genomic RNA

Sequence ID: HE591388.1 Length: 8725 Number of Matches: 9

Range 1: 3034 to 3579 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
443.2 bits(961) 0.0 180/182(99%) 0/182(0%) Minus/Plus
Query       11  VETDYGPKVLGSFEVFKGDFHIKKMEEGSIFVITYKAPIRSTGRLRVHSSECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESERLVNPDLSAPAISKQLEENAYAENEMIALFCIRYHVRLIVITPEYEVSWKFGEGEWPLCGILCLKSN  556
                +ETDYGPKVLGSFEVFKGDFHIKKMEEGSIFVITYKAPIRSTGRLRVHSSECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESERLVNPDLSAPAISKQLEENAYAENEMIALFCIR+HVRLIVITPEYEVSWKFGEGEWPLCGILCLKSN
Subject   3034  IETDYGPKVLGSFEVFKGDFHIKKMEEGSIFVITYKAPIRSTGRLRVHSSECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESERLVNPDLSAPAISKQLEENAYAENEMIALFCIRHHVRLIVITPEYEVSWKFGEGEWPLCGILCLKSN  3579

Range 2: 3034 to 3579 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
413.0 bits(895) 0.0 173/182(95%) 0/182(0%) Plus/Minus
Query       11  I*FKAKNSA*GPLTFPEFPTNFIFWCDHYESYVVPNAE*CDHLILGISILFQLFRNGWG*KIWIHQALTLHKRSNTGL*GKSISAKQKTNRMPKAIAITRHRESVKIINIIISTCLNLAA*QYLLGSGK*AF*TVNPQPASGSNWGLVRYYKNGTFLHLLNVKVPFENFKRPQDFWTIICFY  556
                I*FKAKNS *GP TFPEFPTNFIFWCDHY+ YVVPNAE*C+HLILGISILFQLFRNGWG*KIWI+QALTLHKRSNTGL*GKSISAK KTNRMPKAIAITRH ESVKIINIIISTCLNLAA*QYLLGSGK*AF*TVNPQPASGSNWGLVRYYKNGTFLHLLNVKVPFENFKRPQDFWTII FY
Subject   3034  I*FKAKNST*GPFTFPEFPTNFIFWCDHYQPYVVPNAE*CNHLILGISILFQLFRNGWG*KIWIYQALTLHKRSNTGL*GKSISAK*KTNRMPKAIAITRH*ESVKIINIIISTCLNLAA*QYLLGSGK*AF*TVNPQPASGSNWGLVRYYKNGTFLHLLNVKVPFENFKRPQDFWTIISFY  3579

Range 3: 3036 to 3587 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
405.7 bits(879) 0.0 173/184(94%) 0/184(0%) Minus/Plus
Query        3  RNRLWSKSPGVF*SFQRGLSH*EDGGRFHFCNNVQGPN*IHWQVEGSQFRMLIFRIQGGIARLPD*GMC*L*Y**F*HFLCAW*WQLLLAFCWFFA*H*WTCPKGRYSIFCGE*ALGESRSFSPSHF*TIGRECLCRE*DDRIILHSVPRKTHSDHTRI*S*LEIRGR*VAPMRNSLP*IKSLP  554
                RN LWSKSPGVF*SFQRGLSH*EDGGRFHFCNNVQGPN*IHWQ EGSQFRMLIFRIQGGIARLPD*GMC*L*Y**F*HFL AW*WQLLLAFCWFF *H*WTCPKGRYSIFCGE*ALG+SRSFSPSHF*TIGRECLCRE*DD IILHS PRK  SDHTRI*S*LEIRGR*+APM NSLP*IKSLP
Subject   3036  RN*LWSKSPGVF*SFQRGLSH*EDGGRFHFCNNVQGPN*IHWQAEGSQFRMLIFRIQGGIARLPD*GMC*L*Y**F*HFLSAW*WQLLLAFCWFFT*H*WTCPKGRYSIFCGE*ALGKSRSFSPSHF*TIGRECLCRE*DDCIILHSAPRKADSDHTRI*S*LEIRGR*MAPMWNSLP*IKSLP  3587

Range 4: 3116 to 3589 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
363.1 bits(786) 0.0 148/158(94%) 0/158(0%) Plus/Minus
Query        1  VGSDLI*GKEFRIGATHLPRISN*LHILV*SL*VLRGTECRIMRSSHSRHKHSLPIV*KWLGLKDLDSPSAHSPQKIEYRPLGQVHQC*AKNQQNAKSNCHHQAQRKC*NHQYHNQHMPQSGSLAIPPWIRKMSILNCEPSTCQWI*LGPCTLLQKWN  474
                VGSDLI*GKEF IGA HLPRISN*LHILV*SL  LRG ECRIM+SSHSRHKHSLPIV*KWLGLKDLD PSAHSPQKIEYRPLGQVHQC* KNQQNAKSNCHHQA RKC*NHQYHNQHMPQSGSLAIPPWIRKMSILNCEPS CQWI*LGPCTLLQKWN
Subject   3116  VGSDLI*GKEFHIGAIHLPRISN*LHILV*SLSALRGAECRIMQSSHSRHKHSLPIV*KWLGLKDLDLPSAHSPQKIEYRPLGQVHQC*VKNQQNAKSNCHHQALRKC*NHQYHNQHMPQSGSLAIPPWIRKMSILNCEPSACQWI*LGPCTLLQKWN  3589

Range 5: 3035 to 3073 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
32.2 bits(64) 0.0 12/13(92%) 0/13(0%) Plus/Minus
Query      517  QKTPGLLDHNLFL  555
                QKTPGLLDHN FL
Subject   3035  QKTPGLLDHNQFL  3073

Range 6: 3290 to 3586 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
210.5 bits(453) 0.0 91/99(92%) 0/99(0%) Minus/Plus
Query        4  AIAFGILLVFCLALMDLP*RPVFDLLWRVSAW*IQIFQPQPFLNNWKRMLMPRMR*SHYSAFGTT*DS**SHQNMKLVGNSGKVSGPYAEFFALNQIAA  300
                AIAFGILLVF LALMDLP*RPVFDLLWRVSAW*IQIFQPQPFLNNWKRMLMPRMR* HYSAFGTT*  **SHQNMKLVGNSGKV+GPY EFFALNQI +
Subject   3290  AIAFGILLVFYLALMDLP*RPVFDLLWRVSAW*IQIFQPQPFLNNWKRMLMPRMR*LHYSAFGTT*G***SHQNMKLVGNSGKVNGPYVEFFALNQITS  3586

Range 7: 3035 to 3241 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
161.4 bits(346) 0.0 68/69(99%) 0/69(0%) Minus/Plus
Query      349  *KQIMVQKSWGLLKFSKGTFTLRRWRKVPFL**RTRPQLDPLAG*GFTVQNAHFPDPRRYC*AARLRHV  555
                *K IMVQKSWGLLKFSKGTFTLRRWRKVPFL**RTRPQLDPLAG*GFTVQNAHFPDPRRYC*AARLRHV
Subject   3035  *KLIMVQKSWGLLKFSKGTFTLRRWRKVPFL**RTRPQLDPLAG*GFTVQNAHFPDPRRYC*AARLRHV  3241

Range 8: 3036 to 3422 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
266.4 bits(575) 0.0 128/129(99%) 0/129(0%) Plus/Minus
Query      168  CLEMAGAERSGFTKRSLSTKDRIPAFRASPSVLSKKPTECQKQLPSPGTEKVLKXXXXXXXXXXXWQPSNTSLDPENEHSEL*TLNLPVDLIGALYVITKMEPSSIFLM*KSPLKTSKDPRTFGP*SVS  554
                CLEMAGAERSGFTKRSLSTKDRIPAFRASPSVLSKKPTECQKQLPSPGTEKVLKSSIS*SAHASIWQPSNTSLDPENEHSEL*TL+LPVDLIGALYVITKMEPSSIFLM*KSPLKTSKDPRTFGP*SVS
Subject   3036  CLEMAGAERSGFTKRSLSTKDRIPAFRASPSVLSKKPTECQKQLPSPGTEKVLKSSIS*SAHASIWQPSNTSLDPENEHSEL*TLSLPVDLIGALYVITKMEPSSIFLM*KSPLKTSKDPRTFGP*SVS  3422

Range 9: 3468 to 3578 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
89.5 bits(189) 0.0 35/37(95%) 0/37(0%) Plus/Minus
Query       12  FDLRQRIPHRGHSPSPNFQLTSYSGVITMSLTWYRMQ  122
                FDLRQRIPHRGHSPSPNFQLTSYSGVIT+SLTW RMQ
Subject   3468  FDLRQRIPHRGHSPSPNFQLTSYSGVITISLTWCRMQ  3578

Grapevine rupestris stem pitting associated virus isolate GRSPaV GG, complete genome

Sequence ID: JQ922417.1 Length: 8758 Number of Matches: 9

Range 1: 3034 to 3579 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
443.2 bits(961) 0.0 180/182(99%) 0/182(0%) Minus/Plus
Query       11  VETDYGPKVLGSFEVFKGDFHIKKMEEGSIFVITYKAPIRSTGRLRVHSSECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESERLVNPDLSAPAISKQLEENAYAENEMIALFCIRYHVRLIVITPEYEVSWKFGEGEWPLCGILCLKSN  556
                +ETDYGPKVLGSFEVFKGDFHIKKMEEGSIFVITYKAPIRSTGRLRVHSSECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESERLVNPDLSAPAISKQLEENAYAENEMIALFCIR+HVRLIVITPEYEVSWKFGEGEWPLCGILCLKSN
Subject   3034  IETDYGPKVLGSFEVFKGDFHIKKMEEGSIFVITYKAPIRSTGRLRVHSSECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESERLVNPDLSAPAISKQLEENAYAENEMIALFCIRHHVRLIVITPEYEVSWKFGEGEWPLCGILCLKSN  3579

Range 2: 3036 to 3587 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
416.7 bits(903) 0.0 175/184(95%) 0/184(0%) Minus/Plus
Query        3  RNRLWSKSPGVF*SFQRGLSH*EDGGRFHFCNNVQGPN*IHWQVEGSQFRMLIFRIQGGIARLPD*GMC*L*Y**F*HFLCAW*WQLLLAFCWFFA*H*WTCPKGRYSIFCGE*ALGESRSFSPSHF*TIGRECLCRE*DDRIILHSVPRKTHSDHTRI*S*LEIRGR*VAPMRNSLP*IKSLP  554
                RN LWSKSPGVF*SFQRGLSH*EDGGRFHFCNNVQGPN*IHWQV+GSQFRMLIFR+QGGIARLPD*GMC*L*Y**F*HFLCAW*WQLLLAFCWFFA*H*WTCPKGRYSIFCGE*ALG+SRSFSPSHF*TIGRECLCRE*DDRIILHS PRK +SDHTRI*S*LEIRGR*VAPM N LP*IKSLP
Subject   3036  RNGLWSKSPGVF*SFQRGLSH*EDGGRFHFCNNVQGPN*IHWQVKGSQFRMLIFRVQGGIARLPD*GMC*L*Y**F*HFLCAW*WQLLLAFCWFFA*H*WTCPKGRYSIFCGE*ALGKSRSFSPSHF*TIGRECLCRE*DDRIILHSAPRKAYSDHTRI*S*LEIRGR*VAPMWNPLP*IKSLP  3587

Range 3: 3034 to 3579 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
415.3 bits(900) 0.0 174/182(96%) 0/182(0%) Plus/Minus
Query       11  I*FKAKNSA*GPLTFPEFPTNFIFWCDHYESYVVPNAE*CDHLILGISILFQLFRNGWG*KIWIHQALTLHKRSNTGL*GKSISAKQKTNRMPKAIAITRHRESVKIINIIISTCLNLAA*QYLLGSGK*AF*TVNPQPASGSNWGLVRYYKNGTFLHLLNVKVPFENFKRPQDFWTIICFY  556
                I*FKAK+S *GPLTFPEFPTNFIFWCDHY+ YVVPNAE*CDHLILGISILFQLFRNGWG*KIWI+QALTLHKRSNTGL*GKSISAKQKTNRMPKAIAITRHRESVKIINIIISTCLNLAA*QYLLG GK*AF*TVNP PASGSNWGLVRYYKNGTFLHLLNVKVPFENFKRPQDFWTII FY
Subject   3034  I*FKAKDST*GPLTFPEFPTNFIFWCDHYKPYVVPNAE*CDHLILGISILFQLFRNGWG*KIWIYQALTLHKRSNTGL*GKSISAKQKTNRMPKAIAITRHRESVKIINIIISTCLNLAA*QYLLGPGK*AF*TVNP*PASGSNWGLVRYYKNGTFLHLLNVKVPFENFKRPQDFWTIIRFY  3579

Range 4: 3116 to 3586 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
367.2 bits(795) 0.0 150/157(96%) 0/157(0%) Plus/Minus
Query        4  GSDLI*GKEFRIGATHLPRISN*LHILV*SL*VLRGTECRIMRSSHSRHKHSLPIV*KWLGLKDLDSPSAHSPQKIEYRPLGQVHQC*AKNQQNAKSNCHHQAQRKC*NHQYHNQHMPQSGSLAIPPWIRKMSILNCEPSTCQWI*LGPCTLLQKWN  474
                GSDLI*GK F IGATHLPRISN*LHILV*SL* LRG ECRIMRSSHSRHKHSLPIV*KWLGLKDLD PSAHSPQKIEYRPLGQVHQC*AKNQQNAKSNCHHQAQRKC*NHQYHNQHMPQSGSLAIPPW RKMSILNCEP TCQWI*LGPCTLLQKWN
Subject   3116  GSDLI*GKGFHIGATHLPRISN*LHILV*SL*ALRGAECRIMRSSHSRHKHSLPIV*KWLGLKDLDLPSAHSPQKIEYRPLGQVHQC*AKNQQNAKSNCHHQAQRKC*NHQYHNQHMPQSGSLAIPPWTRKMSILNCEPLTCQWI*LGPCTLLQKWN  3586

Range 5: 3035 to 3073 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.8 bits(63) 0.0 12/13(92%) 0/13(0%) Plus/Minus
Query      517  QKTPGLLDHNLFL  555
                QKTPGLLDHN FL
Subject   3035  QKTPGLLDHNPFL  3073

Range 6: 3290 to 3586 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
216.9 bits(467) 0.0 93/99(94%) 0/99(0%) Minus/Plus
Query        4  AIAFGILLVFCLALMDLP*RPVFDLLWRVSAW*IQIFQPQPFLNNWKRMLMPRMR*SHYSAFGTT*DS**SHQNMKLVGNSGKVSGPYAEFFALNQIAA  300
                AIAFGILLVFCLALMDLP*RPVFDLLWRVSAW*IQIFQPQPFLNNWKRMLMPRMR*SHYSAFGTT*  **SHQNMKLVGNSGKVSGPY E FALNQI +
Subject   3290  AIAFGILLVFCLALMDLP*RPVFDLLWRVSAW*IQIFQPQPFLNNWKRMLMPRMR*SHYSAFGTT*GL**SHQNMKLVGNSGKVSGPYVESFALNQITS  3586

Range 7: 3035 to 3241 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
159.6 bits(342) 0.0 67/69(97%) 0/69(0%) Minus/Plus
Query      349  *KQIMVQKSWGLLKFSKGTFTLRRWRKVPFL**RTRPQLDPLAG*GFTVQNAHFPDPRRYC*AARLRHV  555
                *K+IMVQKSWGLLKFSKGTFTLRRWRKVPFL**RTRPQLDPLAG*GFTVQNAHFP PRRYC*AARLRHV
Subject   3035  *KRIMVQKSWGLLKFSKGTFTLRRWRKVPFL**RTRPQLDPLAG*GFTVQNAHFPGPRRYC*AARLRHV  3241

Range 8: 3036 to 3422 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
268.7 bits(580) 0.0 129/129(100%) 0/129(0%) Plus/Minus
Query      168  CLEMAGAERSGFTKRSLSTKDRIPAFRASPSVLSKKPTECQKQLPSPGTEKVLKXXXXXXXXXXXWQPSNTSLDPENEHSEL*TLNLPVDLIGALYVITKMEPSSIFLM*KSPLKTSKDPRTFGP*SVS  554
                CLEMAGAERSGFTKRSLSTKDRIPAFRASPSVLSKKPTECQKQLPSPGTEKVLKSSIS*SAHASIWQPSNTSLDPENEHSEL*TLNLPVDLIGALYVITKMEPSSIFLM*KSPLKTSKDPRTFGP*SVS
Subject   3036  CLEMAGAERSGFTKRSLSTKDRIPAFRASPSVLSKKPTECQKQLPSPGTEKVLKSSIS*SAHASIWQPSNTSLDPENEHSEL*TLNLPVDLIGALYVITKMEPSSIFLM*KSPLKTSKDPRTFGP*SVS  3422

Range 9: 3468 to 3578 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
89.5 bits(189) 0.0 35/37(95%) 0/37(0%) Plus/Minus
Query       12  FDLRQRIPHRGHSPSPNFQLTSYSGVITMSLTWYRMQ  122
                FDLRQRIPHRGHSPSPNFQLTSYSGVIT+SLTW RMQ
Subject   3468  FDLRQRIPHRGHSPSPNFQLTSYSGVITISLTWCRMQ  3578

Grapevine rupestris stem pitting associated virus isolate Tannat Rspav1, complete genome

Sequence ID: KR528585.1 Length: 8595 Number of Matches: 9

Range 1: 3016 to 3561 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
440.9 bits(956) 0.0 179/182(98%) 0/182(0%) Minus/Plus
Query       11  VETDYGPKVLGSFEVFKGDFHIKKMEEGSIFVITYKAPIRSTGRLRVHSSECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESERLVNPDLSAPAISKQLEENAYAENEMIALFCIRYHVRLIVITPEYEVSWKFGEGEWPLCGILCLKSN  556
                +ETDYGPKVLGSFEVFKGDFHIKKMEEGSIFVITYKAPIRSTGRLRVHSSECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESERLVNPDLSAPAISKQLEENAYAENEMIALFCIR+HVRLIVITPEYEVSWKFGEGEWPLCGILCLKS+
Subject   3016  IETDYGPKVLGSFEVFKGDFHIKKMEEGSIFVITYKAPIRSTGRLRVHSSECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESERLVNPDLSAPAISKQLEENAYAENEMIALFCIRHHVRLIVITPEYEVSWKFGEGEWPLCGILCLKSS  3561

Range 2: 3016 to 3558 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
399.7 bits(866) 0.0 164/181(91%) 0/181(0%) Plus/Minus
Query       14  *FKAKNSA*GPLTFPEFPTNFIFWCDHYESYVVPNAE*CDHLILGISILFQLFRNGWG*KIWIHQALTLHKRSNTGL*GKSISAKQKTNRMPKAIAITRHRESVKIINIIISTCLNLAA*QYLLGSGK*AF*TVNPQPASGSNWGLVRYYKNGTFLHLLNVKVPFENFKRPQDFWTIICFY  556
                *FKAKNSA GP TFP+FPT+FIFWCD+Y+ ++VPN +*C+HLILGISILFQLFRNGWG*KIWI+QALTLHKRSNTGL GKSISA+ KTNRMPKAIAITRHRESVKIINIIISTCLNLA+*QYLLGSGK*AF*TVNPQPASGSNWGLVRYYKNGTFLHLLNVKVPFENFKRPQDFWTIICFY
Subject   3016  *FKAKNSAQGPFTFPKFPTDFIFWCDYYQPHMVPNTK*CNHLILGISILFQLFRNGWG*KIWIYQALTLHKRSNTGLQGKSISAE*KTNRMPKAIAITRHRESVKIINIIISTCLNLAS*QYLLGSGK*AF*TVNPQPASGSNWGLVRYYKNGTFLHLLNVKVPFENFKRPQDFWTIICFY  3558

Range 3: 3018 to 3569 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
396.5 bits(859) 0.0 167/184(91%) 0/184(0%) Minus/Plus
Query        3  RNRLWSKSPGVF*SFQRGLSH*EDGGRFHFCNNVQGPN*IHWQVEGSQFRMLIFRIQGGIARLPD*GMC*L*Y**F*HFLCAW*WQLLLAFCWFFA*H*WTCPKGRYSIFCGE*ALGESRSFSPSHF*TIGRECLCRE*DDRIILHSVPRKTHSDHTRI*S*LEIRGR*VAPMRNSLP*IKSLP  554
                RNRLWSKSPGVF*SFQRGLSH*EDGGRFHFCNNVQGPN*IHWQVEGSQFRMLIFRIQGGIAR+PD*GMC*L*Y**F*HFLCAW*WQLLLAFCWFF  H*WTCP+GRYSIFCGE*ALG+SRSFSPSHF*TIGRECLCRE*DD IIL+S P +  S+HTRI*S LEI GR*+AP+RNSLP*IKSLP
Subject   3018  RNRLWSKSPGVF*SFQRGLSH*EDGGRFHFCNNVQGPN*IHWQVEGSQFRMLIFRIQGGIARMPD*GMC*L*Y**F*HFLCAW*WQLLLAFCWFFTQH*WTCPEGRYSIFCGE*ALGKSRSFSPSHF*TIGRECLCRE*DDCIILYSAPCEADSNHTRI*SQLEIWGR*MAPVRNSLP*IKSLP  3569

Range 4: 3098 to 3571 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
347.0 bits(751) 0.0 142/158(90%) 0/158(0%) Plus/Minus
Query        1  VGSDLI*GKEFRIGATHLPRISN*LHILV*SL*VLRGTECRIMRSSHSRHKHSLPIV*KWLGLKDLDSPSAHSPQKIEYRPLGQVHQC*AKNQQNAKSNCHHQAQRKC*NHQYHNQHMPQSGSLAIPPWIRKMSILNCEPSTCQWI*LGPCTLLQKWN  474
                VGSDLI*GKEFR GA HLP+ISN*LHILV* L    G E +IM+SSHSRHKHSLPIV*KWLGLKDLD PSAHSPQKIEYRP GQVHQC* KNQQNAKSNCHHQAQRKC*NHQYHNQHMPQSG LAIPPWIRKMSILNCEPSTCQWI*LGPCTLLQKWN
Subject   3098  VGSDLI*GKEFRTGAIHLPQISN*LHILV*LLSASHGAEYKIMQSSHSRHKHSLPIV*KWLGLKDLDLPSAHSPQKIEYRPSGQVHQC*VKNQQNAKSNCHHQAQRKC*NHQYHNQHMPQSGILAIPPWIRKMSILNCEPSTCQWI*LGPCTLLQKWN  3571

Range 5: 3017 to 3055 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.0 bits(70) 0.0 13/13(100%) 0/13(0%) Plus/Minus
Query      517  QKTPGLLDHNLFL  555
                QKTPGLLDHNLFL
Subject   3017  QKTPGLLDHNLFL  3055

Range 6: 3272 to 3568 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
192.1 bits(413) 0.0 84/99(85%) 0/99(0%) Minus/Plus
Query        4  AIAFGILLVFCLALMDLP*RPVFDLLWRVSAW*IQIFQPQPFLNNWKRMLMPRMR*SHYSAFGTT*DS**SHQNMKLVGNSGKVSGPYAEFFALNQIAA  300
                AIAFGILLVF  ALMDLP*RPVFDLLWRVSAW*IQIFQPQPFLNNWKRMLMPRMR* HY  FGT *  **SHQNMK VGN GKV+GP AEFFALNQ+ +
Subject   3272  AIAFGILLVFYSALMDLP*RPVFDLLWRVSAW*IQIFQPQPFLNNWKRMLMPRMR*LHYFVFGTM*G***SHQNMKSVGNLGKVNGPCAEFFALNQVTS  3568

Range 7: 3017 to 3223 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
161.9 bits(347) 0.0 68/69(99%) 0/69(0%) Minus/Plus
Query      349  *KQIMVQKSWGLLKFSKGTFTLRRWRKVPFL**RTRPQLDPLAG*GFTVQNAHFPDPRRYC*AARLRHV  555
                *KQIMVQKSWGLLKFSKGTFTLRRWRKVPFL**RTRPQLDPLAG*GFTVQNAHFPDPRRYC* ARLRHV
Subject   3017  *KQIMVQKSWGLLKFSKGTFTLRRWRKVPFL**RTRPQLDPLAG*GFTVQNAHFPDPRRYC*DARLRHV  3223

Range 8: 3018 to 3404 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
266.4 bits(575) 0.0 128/129(99%) 0/129(0%) Plus/Minus
Query      168  CLEMAGAERSGFTKRSLSTKDRIPAFRASPSVLSKKPTECQKQLPSPGTEKVLKXXXXXXXXXXXWQPSNTSLDPENEHSEL*TLNLPVDLIGALYVITKMEPSSIFLM*KSPLKTSKDPRTFGP*SVS  554
                CLEMAGAERSGFTKRSLSTKDRIPAFRASPSVLSKKPTECQKQLPSPGTEKVLKSSIS*SAHASIW PSNTSLDPENEHSEL*TLNLPVDLIGALYVITKMEPSSIFLM*KSPLKTSKDPRTFGP*SVS
Subject   3018  CLEMAGAERSGFTKRSLSTKDRIPAFRASPSVLSKKPTECQKQLPSPGTEKVLKSSIS*SAHASIWHPSNTSLDPENEHSEL*TLNLPVDLIGALYVITKMEPSSIFLM*KSPLKTSKDPRTFGP*SVS  3404

Range 9: 3450 to 3557 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.9 bits(179) 0.0 33/36(92%) 0/36(0%) Plus/Minus
Query       15  DLRQRIPHRGHSPSPNFQLTSYSGVITMSLTWYRMQ  122
                DLRQRIPHRGHSPSPNFQLTSYSGVIT+SLTW R+Q
Subject   3450  DLRQRIPHRGHSPSPNFQLTSYSGVITISLTWCRIQ  3557

Grapevine Rupestris stem pitting associated virus, complete genome

Sequence ID: AF026278.1 Length: 8725 Number of Matches: 9

Range 1: 3034 to 3579 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
439.6 bits(953) 0.0 179/182(98%) 0/182(0%) Minus/Plus
Query       11  VETDYGPKVLGSFEVFKGDFHIKKMEEGSIFVITYKAPIRSTGRLRVHSSECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESERLVNPDLSAPAISKQLEENAYAENEMIALFCIRYHVRLIVITPEYEVSWKFGEGEWPLCGILCLKSN  556
                +ETDYGPKVLGSFEVFKGDF IKKMEEGSIFVITYKAPIRSTGRLRVHSSECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESERLVNPDLSAPAISKQLEENAYAENEMIALFCIR+HVRLIVITPEYEVSWKFGEGEWPLCGILCLKSN
Subject   3034  IETDYGPKVLGSFEVFKGDFQIKKMEEGSIFVITYKAPIRSTGRLRVHSSECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESERLVNPDLSAPAISKQLEENAYAENEMIALFCIRHHVRLIVITPEYEVSWKFGEGEWPLCGILCLKSN  3579

Range 2: 3034 to 3579 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
411.6 bits(892) 0.0 171/182(94%) 0/182(0%) Plus/Minus
Query       11  I*FKAKNSA*GPLTFPEFPTNFIFWCDHYESYVVPNAE*CDHLILGISILFQLFRNGWG*KIWIHQALTLHKRSNTGL*GKSISAKQKTNRMPKAIAITRHRESVKIINIIISTCLNLAA*QYLLGSGK*AF*TVNPQPASGSNWGLVRYYKNGTFLHLLNVKVPFENFKRPQDFWTIICFY  556
                I*FKAKNS *GPLTFPEFPTNFIFWC+HY+ YVVPNAE*CDHLILGISILFQLFRNGWG*KIWI+QALTLHKRSNT L*G+SISAK KTNRMPKAIAITRHRESVKIINIIISTCLNLAA*QYLLGSGK*AF*TVNPQPASGSNWGLV YYKNGTFLHLLN+KVPFENF+RPQDFWTIICFY
Subject   3034  I*FKAKNST*GPLTFPEFPTNFIFWCNHYKPYVVPNAE*CDHLILGISILFQLFRNGWG*KIWIYQALTLHKRSNTSL*GESISAK*KTNRMPKAIAITRHRESVKIINIIISTCLNLAA*QYLLGSGK*AF*TVNPQPASGSNWGLVCYYKNGTFLHLLNLKVPFENFERPQDFWTIICFY  3579

Range 3: 3036 to 3587 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
404.7 bits(877) 0.0 172/184(93%) 0/184(0%) Minus/Plus
Query        3  RNRLWSKSPGVF*SFQRGLSH*EDGGRFHFCNNVQGPN*IHWQVEGSQFRMLIFRIQGGIARLPD*GMC*L*Y**F*HFLCAW*WQLLLAFCWFFA*H*WTCPKGRYSIFCGE*ALGESRSFSPSHF*TIGRECLCRE*DDRIILHSVPRKTHSDHTRI*S*LEIRGR*VAPMRNSLP*IKSLP  554
                RNRLWSKSPGVF SFQRGLS+*EDGGRFHFCNN+QGPN*IHWQVEGSQFRMLIFRIQGGIARLPD*GMC*L*Y**F*HFLCAW*WQLLLAFCWFF *H*WT PKG YSIFCGE*ALG+SRSFSPSHF*TIGRECLCRE*DDRIILHS PRK +SD+TRI*S*LEIRGR*VAPM NSLP*IKSLP
Subject   3036  RNRLWSKSPGVFRSFQRGLSN*EDGGRFHFCNNIQGPN*IHWQVEGSQFRMLIFRIQGGIARLPD*GMC*L*Y**F*HFLCAW*WQLLLAFCWFFT*H*WTRPKGWYSIFCGE*ALGKSRSFSPSHF*TIGRECLCRE*DDRIILHSAPRKAYSDYTRI*S*LEIRGR*VAPMWNSLP*IKSLP  3587

Range 4: 3116 to 3589 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
369.0 bits(799) 0.0 150/158(95%) 0/158(0%) Plus/Minus
Query        1  VGSDLI*GKEFRIGATHLPRISN*LHILV*SL*VLRGTECRIMRSSHSRHKHSLPIV*KWLGLKDLDSPSAHSPQKIEYRPLGQVHQC*AKNQQNAKSNCHHQAQRKC*NHQYHNQHMPQSGSLAIPPWIRKMSILNCEPSTCQWI*LGPCTLLQKWN  474
                VGSDLI*GKEF IGATHLPRISN*LHILV*SL* LRG ECRIMRSSHSRHKHSLPIV*KWLGLKDLD PSAHSPQKIEY+PLG+VHQC* KNQQNAKSNCHHQAQRKC*NHQYHNQHMPQSGSLAIPPWIRKMSILNCEPSTCQWI*LGPC LLQKWN
Subject   3116  VGSDLI*GKEFHIGATHLPRISN*LHILV*SL*ALRGAECRIMRSSHSRHKHSLPIV*KWLGLKDLDLPSAHSPQKIEYQPLGRVHQC*VKNQQNAKSNCHHQAQRKC*NHQYHNQHMPQSGSLAIPPWIRKMSILNCEPSTCQWI*LGPCMLLQKWN  3589

Range 5: 3035 to 3073 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
33.1 bits(66) 0.0 12/13(92%) 0/13(0%) Plus/Minus
Query      517  QKTPGLLDHNLFL  555
                +KTPGLLDHNLFL
Subject   3035  RKTPGLLDHNLFL  3073

Range 6: 3290 to 3586 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
205.4 bits(442) 0.0 90/99(91%) 0/99(0%) Minus/Plus
Query        4  AIAFGILLVFCLALMDLP*RPVFDLLWRVSAW*IQIFQPQPFLNNWKRMLMPRMR*SHYSAFGTT*DS**SHQNMKLVGNSGKVSGPYAEFFALNQIAA  300
                AIAFGILLVF LALMD P*R VFDLLWRVSAW*IQIFQPQPFLNNWKRMLMPRMR*SHYSAFGTT*  ** HQNMKLVGNSGKVSGPY EFFALNQI +
Subject   3290  AIAFGILLVFYLALMDSP*RLVFDLLWRVSAW*IQIFQPQPFLNNWKRMLMPRMR*SHYSAFGTT*GL**LHQNMKLVGNSGKVSGPYVEFFALNQITS  3586

Range 7: 3035 to 3241 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
156.9 bits(336) 0.0 66/69(96%) 0/69(0%) Minus/Plus
Query      349  *KQIMVQKSWGLLKFSKGTFTLRRWRKVPFL**RTRPQLDPLAG*GFTVQNAHFPDPRRYC*AARLRHV  555
                *KQIMVQKSWGL KFSKGTF LRRWRKVPFL** TRPQLDPLAG*GFTVQNAHFPDPRRYC*AARLRHV
Subject   3035  *KQIMVQKSWGLSKFSKGTFKLRRWRKVPFL**HTRPQLDPLAG*GFTVQNAHFPDPRRYC*AARLRHV  3241

Range 8: 3036 to 3422 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
266.8 bits(576) 0.0 128/129(99%) 0/129(0%) Plus/Minus
Query      168  CLEMAGAERSGFTKRSLSTKDRIPAFRASPSVLSKKPTECQKQLPSPGTEKVLKXXXXXXXXXXXWQPSNTSLDPENEHSEL*TLNLPVDLIGALYVITKMEPSSIFLM*KSPLKTSKDPRTFGP*SVS  554
                CLEMAGAERSGFTKRSLSTKDRIPAFRASPSVLSKKPTECQKQLPSPGTEKVLKSSIS*SAHASIWQPSNTSLDPENEHSEL*TLNLPVDLIGALYVITKMEPSSIFL+*KSPLKTSKDPRTFGP*SVS
Subject   3036  CLEMAGAERSGFTKRSLSTKDRIPAFRASPSVLSKKPTECQKQLPSPGTEKVLKSSIS*SAHASIWQPSNTSLDPENEHSEL*TLNLPVDLIGALYVITKMEPSSIFLI*KSPLKTSKDPRTFGP*SVS  3422

Range 9: 3468 to 3578 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
89.5 bits(189) 0.0 35/37(95%) 0/37(0%) Plus/Minus
Query       12  FDLRQRIPHRGHSPSPNFQLTSYSGVITMSLTWYRMQ  122
                FDLRQRIPHRGHSPSPNFQLTSYSGVIT+SLTW RMQ
Subject   3468  FDLRQRIPHRGHSPSPNFQLTSYSGVITISLTWCRMQ  3578

Grapevine rupestris stem pitting associated virus isolate ISA BR replicase, 24.4 kDa protein, 12.8 kDa protein, 8.4 kDa protein, and 28 kDa protein genes, complete cds

Sequence ID: KX925555.1 Length: 8659 Number of Matches: 9

Range 1: 3018 to 3563 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
438.7 bits(951) 0.0 178/182(98%) 0/182(0%) Minus/Plus
Query       11  VETDYGPKVLGSFEVFKGDFHIKKMEEGSIFVITYKAPIRSTGRLRVHSSECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESERLVNPDLSAPAISKQLEENAYAENEMIALFCIRYHVRLIVITPEYEVSWKFGEGEWPLCGILCLKSN  556
                +ETDYGPKVLGSFEVFKGDFHIKKMEEGSIFVITYKAPIRSTGRLRVHSSECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESERLVNPDLSAP ISKQLEENAYAENEMIALFCIR+HVRLIVITPEYEVSWKFGE EWPLCGILCLKSN
Subject   3018  IETDYGPKVLGSFEVFKGDFHIKKMEEGSIFVITYKAPIRSTGRLRVHSSECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESERLVNPDLSAPTISKQLEENAYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLKSN  3563

Range 2: 3018 to 3563 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
416.7 bits(903) 0.0 174/182(96%) 0/182(0%) Plus/Minus
Query       11  I*FKAKNSA*GPLTFPEFPTNFIFWCDHYESYVVPNAE*CDHLILGISILFQLFRNGWG*KIWIHQALTLHKRSNTGL*GKSISAKQKTNRMPKAIAITRHRESVKIINIIISTCLNLAA*QYLLGSGK*AF*TVNPQPASGSNWGLVRYYKNGTFLHLLNVKVPFENFKRPQDFWTIICFY  556
                I*FKAKNS *GPLTFPEFPTNFIFWC+HY+ YVV NAE*CDHLILGISILFQLFRNGWG*KIWI+QALTLHKRSNT L*GKSISAK KTNRMPKAIAITRHRESVKIINIIISTCLNLAA*QYLLGSGK*AF*TVNPQPASGSNWGLVRYYKNGTFLHLLNVKVPFENFKRPQDFWTIICFY
Subject   3018  I*FKAKNST*GPLTFPEFPTNFIFWCNHYKPYVVSNAE*CDHLILGISILFQLFRNGWG*KIWIYQALTLHKRSNTSL*GKSISAK*KTNRMPKAIAITRHRESVKIINIIISTCLNLAA*QYLLGSGK*AF*TVNPQPASGSNWGLVRYYKNGTFLHLLNVKVPFENFKRPQDFWTIICFY  3563

Range 3: 3020 to 3571 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
411.6 bits(892) 0.0 173/184(94%) 0/184(0%) Minus/Plus
Query        3  RNRLWSKSPGVF*SFQRGLSH*EDGGRFHFCNNVQGPN*IHWQVEGSQFRMLIFRIQGGIARLPD*GMC*L*Y**F*HFLCAW*WQLLLAFCWFFA*H*WTCPKGRYSIFCGE*ALGESRSFSPSHF*TIGRECLCRE*DDRIILHSVPRKTHSDHTRI*S*LEIRGR*VAPMRNSLP*IKSLP  554
                RNRLWSKSPGVF*SFQRGLSH*EDGGRFHFCNNVQGPN*IHWQVEGSQFRMLIFRIQGGIARLPD*GMC*L*Y**F*HFLCAW*WQLLLAFCWFF *H*WTCPKG YSIFCGE*ALG+SRSFSP+HF*TIGRECLCRE*DDRIILHS PRK +SD+TRI*S*LEIRG+*VAPM NSLP*IKS P
Subject   3020  RNRLWSKSPGVF*SFQRGLSH*EDGGRFHFCNNVQGPN*IHWQVEGSQFRMLIFRIQGGIARLPD*GMC*L*Y**F*HFLCAW*WQLLLAFCWFFT*H*WTCPKGWYSIFCGE*ALGKSRSFSPNHF*TIGRECLCRE*DDRIILHSTPRKAYSDYTRI*S*LEIRGK*VAPMWNSLP*IKSFP  3571

Range 4: 3100 to 3573 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
370.4 bits(802) 0.0 150/158(95%) 0/158(0%) Plus/Minus
Query        1  VGSDLI*GKEFRIGATHLPRISN*LHILV*SL*VLRGTECRIMRSSHSRHKHSLPIV*KWLGLKDLDSPSAHSPQKIEYRPLGQVHQC*AKNQQNAKSNCHHQAQRKC*NHQYHNQHMPQSGSLAIPPWIRKMSILNCEPSTCQWI*LGPCTLLQKWN  474
                VG+DLI*GKEF IGATH PRISN*LHILV*SL* LRG ECRIMRSSHSRHKHSLPIV*KWLGLKDLD PSAHSPQKIEY+PLGQVHQC* KNQQNAKSNCHHQAQRKC*NHQYHNQHMPQSGSLAIPPWIRKMSILNCEPSTCQWI*LGPCTLLQKWN
Subject   3100  VGNDLI*GKEFHIGATHFPRISN*LHILV*SL*ALRGVECRIMRSSHSRHKHSLPIV*KWLGLKDLDLPSAHSPQKIEYQPLGQVHQC*VKNQQNAKSNCHHQAQRKC*NHQYHNQHMPQSGSLAIPPWIRKMSILNCEPSTCQWI*LGPCTLLQKWN  3573

Range 5: 3019 to 3057 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.0 bits(70) 0.0 13/13(100%) 0/13(0%) Plus/Minus
Query      517  QKTPGLLDHNLFL  555
                QKTPGLLDHNLFL
Subject   3019  QKTPGLLDHNLFL  3057

Range 6: 3274 to 3564 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
204.5 bits(440) 0.0 90/97(93%) 0/97(0%) Minus/Plus
Query       10  AIAFGILLVFCLALMDLP*RPVFDLLWRVSAW*IQIFQPQPFLNNWKRMLMPRMR*SHYSAFGTT*DS**SHQNMKLVGNSGKVSGPYAEFFALNQI  300
                AIAFGILLVF LALMDLP*R VFDLLWRVSAW*IQIFQPQPFLNNWKRMLMPRMR*SHYSAF TT*  ** HQNMKLVGNSGKVSGPY EFFALNQI
Subject   3274  AIAFGILLVFYLALMDLP*RLVFDLLWRVSAW*IQIFQPQPFLNNWKRMLMPRMR*SHYSAFDTT*GL**LHQNMKLVGNSGKVSGPYVEFFALNQI  3564

Range 7: 3019 to 3225 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
164.6 bits(353) 0.0 69/69(100%) 0/69(0%) Minus/Plus
Query      349  *KQIMVQKSWGLLKFSKGTFTLRRWRKVPFL**RTRPQLDPLAG*GFTVQNAHFPDPRRYC*AARLRHV  555
                *KQIMVQKSWGLLKFSKGTFTLRRWRKVPFL**RTRPQLDPLAG*GFTVQNAHFPDPRRYC*AARLRHV
Subject   3019  *KQIMVQKSWGLLKFSKGTFTLRRWRKVPFL**RTRPQLDPLAG*GFTVQNAHFPDPRRYC*AARLRHV  3225

Range 8: 3020 to 3406 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
266.8 bits(576) 0.0 128/129(99%) 0/129(0%) Plus/Minus
Query      168  CLEMAGAERSGFTKRSLSTKDRIPAFRASPSVLSKKPTECQKQLPSPGTEKVLKXXXXXXXXXXXWQPSNTSLDPENEHSEL*TLNLPVDLIGALYVITKMEPSSIFLM*KSPLKTSKDPRTFGP*SVS  554
                CLEM GAERSGFTKRSLSTKDRIPAFRASPSVLSKKPTECQKQLPSPGTEKVLKSSIS*SAHASIWQPSNTSLDPENEHSEL*TLNLPVDLIGALYVITKMEPSSIFLM*KSPLKTSKDPRTFGP*SVS
Subject   3020  CLEMVGAERSGFTKRSLSTKDRIPAFRASPSVLSKKPTECQKQLPSPGTEKVLKSSIS*SAHASIWQPSNTSLDPENEHSEL*TLNLPVDLIGALYVITKMEPSSIFLM*KSPLKTSKDPRTFGP*SVS  3406

Range 9: 3452 to 3562 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.9 bits(179) 0.0 34/37(92%) 0/37(0%) Plus/Minus
Query       12  FDLRQRIPHRGHSPSPNFQLTSYSGVITMSLTWYRMQ  122
                FDLRQRIPHRGHS SPNFQLTSYSGVIT+SLTW RMQ
Subject   3452  FDLRQRIPHRGHSLSPNFQLTSYSGVITISLTWCRMQ  3562

Nucleotide Sequence (390 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 10 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
39
78
117
156
195
234
273
312
351
390

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate GRSPAV 1050 02 RNA dependent RNA polymerase (RdRp) gene, partial cds; and triple gene block 1 (TGB1), triple gene block 2 (TGB2), triple gene block 3 (TGB3), coat protein (CP), and 14 kDa protein (14K) genes, complete cds

Sequence ID: JX513892.1 Length: 8716 Number of Matches: 8

Range 1: 7512 to 7862 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
260.9 bits(563) 0.0 116/117(99%) 0/117(0%) Minus/Minus
Query        2  PSGCF*ALANSSDFSRASKASFDSPGSFPI*LAIQPI*Q**SISSTARLTPKAFKPPNISFTVDARASLGPQFSIKIDSPVALMKQPW*LPLLLST*ARIWMAITIPTKTRIPNRQY  352
                PSGCF*ALANSSDFSRASKASFDSPGSFPI*LAIQPI*Q**SISSTARLTPKAFKPPN SFTVDARASLGPQFSIKIDSPVALMKQPW*LPLLLST*ARIWMAITIPTKTRIPNRQY
Subject   7512  PSGCF*ALANSSDFSRASKASFDSPGSFPI*LAIQPI*Q**SISSTARLTPKAFKPPNTSFTVDARASLGPQFSIKIDSPVALMKQPW*LPLLLST*ARIWMAITIPTKTRIPNRQY  7862

Range 2: 7513 to 7866 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
243.9 bits(526) 0.0 112/118(95%) 0/118(0%) Minus/Minus
Query        3  KTFRXXXXXXXLQRF*PGFKSLI*FTGEFPNLTCHSTNLTMIINFFNSTANP*SLQTSQHLLHSGCKGLTWAAVFNQN*LSSGPNEATLVIATTAVYMSKDLDGNYNSYQDQNSKQTI  356
                +TFRL LSSS*LQ F*PGFKSLI*FTGEFPNLTCHS NLTMIINFF+STANP*SLQTSQHLLHSGCKGLTWAAVFNQN*LSSGP+EATLVIATTAVYMSKDLDGNYNSYQDQNSKQTI
Subject   7513  RTFRLFLSSS*LQ*F*PGFKSLI*FTGEFPNLTCHSANLTMIINFFDSTANP*SLQTSQHLLHSGCKGLTWAAVFNQN*LSSGPDEATLVIATTAVYMSKDLDGNYNSYQDQNSKQTI  7866

Range 3: 7511 to 7723 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
185.3 bits(398) 0.0 70/71(99%) 0/71(0%) Minus/Minus
Query        1  HG*PLKPSNLPTSPSQWMQGPHLGRSFQSKLTLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNT  213
                HG*PLKPSNLPT PSQWMQGPHLGRSFQSKLTLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNT
Subject   7511  HG*PLKPSNLPTPPSQWMQGPHLGRSFQSKLTLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNT  7723

Range 4: 7778 to 7864 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.5 bits(130) 0.0 26/29(90%) 0/29(0%) Minus/Minus
Query      268  DLPAAFEL*LTPAILAGLQKPHLIHRGVS  354
                +LPA FEL*LTP ILAGLQKPHLIHRGVS
Subject   7778  NLPAVFEL*LTPVILAGLQKPHLIHRGVS  7864

Range 5: 7511 to 7867 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
227.0 bits(489) 0.0 114/119(96%) 0/119(0%) Plus/Plus
Query        1  CIVCLEFWSW*EL*LPSKSLLM*TAVVAITKVASLGPLESQF*LKTAAQVRPLHPL*RRCWEV*RL*GLAXXXXXXXXXXXXXEWQVKLGNSPVNQMRLLKPG*NRWS*LELKSSRKVL  357
                CIVCLEFWSW*EL*LPSKSLLM*TAVVAITKVAS GPLESQF*LKTAAQVRPLHPL*RRCWEV*RL*GLAVL KKLIIIVKL EWQVKLGNSPVNQMRLLKPG*N WS*LELK+SRKVL
Subject   7511  CIVCLEFWSW*EL*LPSKSLLM*TAVVAITKVASSGPLESQF*LKTAAQVRPLHPL*RRCWEV*RL*GLAVLSKKLIIIVKLAEWQVKLGNSPVNQMRLLKPG*NHWS*LELKNSRKVL  7867

Range 6: 7512 to 7733 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
189.4 bits(407) 0.0 71/74(96%) 0/74(0%) Plus/Plus
Query        2  VLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLH*GHWRVNFD*KLRPK*GPCIHCEGDVGRFEGFRG*PCC*R  223
                VLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLH GHWRVNFD*KLRPK*GPCIHCEG VGRFEGFRG*PCC R
Subject   7512  VLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLHQGHWRVNFD*KLRPK*GPCIHCEGGVGRFEGFRG*PCCRR  7733

Range 7: 7779 to 7862 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.7 bits(113) 0.0 26/28(93%) 0/28(0%) Plus/Plus
Query      269  ETPR*IK*GF*SPAKIAGVS*SSKAAGR  352
                ETPR*IK*GF*SPAKI GVS*SSK AGR
Subject   7779  ETPR*IK*GF*SPAKITGVS*SSKTAGR  7862

Range 8: 7573 to 7863 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
223.3 bits(481) 0.0 96/97(99%) 0/97(0%) Plus/Plus
Query       63  HVDSSSGNHQGCFIRATGESILIENCGPSEALASTVKEMLGGLKALGVSRAVEEIDYHC*IG*MASQIGKLPGESNEAFEARLKSLELARAQKQPEG  353
                HVDSSSGNHQGCFIRATGESILIENCGPSEALASTVKE+LGGLKALGVSRAVEEIDYHC*IG*MASQIGKLPGESNEAFEARLKSLELARAQKQPEG
Subject   7573  HVDSSSGNHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVSRAVEEIDYHC*IG*MASQIGKLPGESNEAFEARLKSLELARAQKQPEG  7863

Grapevine Rupestris stem pitting associated virus, complete genome

Sequence ID: AF026278.1 Length: 8725 Number of Matches: 8

Range 1: 7520 to 7870 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
259.0 bits(559) 0.0 115/117(98%) 0/117(0%) Minus/Minus
Query        2  PSGCF*ALANSSDFSRASKASFDSPGSFPI*LAIQPI*Q**SISSTARLTPKAFKPPNISFTVDARASLGPQFSIKIDSPVALMKQPW*LPLLLST*ARIWMAITIPTKTRIPNRQY  352
                PSGCF*ALANSSDFSRASKASFDSPGSFPI*LAIQPI*Q**SISST RLTPKAFKPPN SFTVDARASLGPQFSIKIDSPVALMKQPW*LPLLLST*ARIWMAITIPTKTRIPNRQY
Subject   7520  PSGCF*ALANSSDFSRASKASFDSPGSFPI*LAIQPI*Q**SISSTVRLTPKAFKPPNTSFTVDARASLGPQFSIKIDSPVALMKQPW*LPLLLST*ARIWMAITIPTKTRIPNRQY  7870

Range 2: 7521 to 7874 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
244.4 bits(527) 0.0 114/118(97%) 0/118(0%) Minus/Minus
Query        3  KTFRXXXXXXXLQRF*PGFKSLI*FTGEFPNLTCHSTNLTMIINFFNSTANP*SLQTSQHLLHSGCKGLTWAAVFNQN*LSSGPNEATLVIATTAVYMSKDLDGNYNSYQDQNSKQTI  356
                +TFRLLLSSS*LQRF*PGFKSLI*FTGEFPNLTCHS NLTMIINFFNSTANP*SLQTS HLLHSGCKGLTWAAVFN N*LSSGPNEATLVIATTAVYMSKDLDGNYNSYQDQNSKQTI
Subject   7521  RTFRLLLSSS*LQRF*PGFKSLI*FTGEFPNLTCHSANLTMIINFFNSTANP*SLQTS*HLLHSGCKGLTWAAVFN*N*LSSGPNEATLVIATTAVYMSKDLDGNYNSYQDQNSKQTI  7874

Range 3: 7519 to 7875 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
226.5 bits(488) 0.0 117/119(98%) 0/119(0%) Plus/Plus
Query        1  CIVCLEFWSW*EL*LPSKSLLM*TAVVAITKVASLGPLESQF*LKTAAQVRPLHPL*RRCWEV*RL*GLAXXXXXXXXXXXXXEWQVKLGNSPVNQMRLLKPG*NRWS*LELKSSRKVL  357
                CIVCLEFWSW*EL*LPSKSLLM*TAVVAITKVASLGPLESQF*LKTAAQVRPLHPL*RRC EV*RL*GLAVLLKKLIIIVKL EWQVKLGNSPVNQMRLLKPG*NRWS*LELKSSRKVL
Subject   7519  CIVCLEFWSW*EL*LPSKSLLM*TAVVAITKVASLGPLESQF*LKTAAQVRPLHPL*RRC*EV*RL*GLAVLLKKLIIIVKLAEWQVKLGNSPVNQMRLLKPG*NRWS*LELKSSRKVL  7875

Range 4: 7581 to 7871 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
221.5 bits(477) 0.0 95/97(98%) 0/97(0%) Plus/Plus
Query       63  HVDSSSGNHQGCFIRATGESILIENCGPSEALASTVKEMLGGLKALGVSRAVEEIDYHC*IG*MASQIGKLPGESNEAFEARLKSLELARAQKQPEG  353
                HVDSSSGNHQGCFIRATGESILIENCGPSEALASTVKE+LGGLKALGVSR VEEIDYHC*IG*MASQIGKLPGESNEAFEARLKSLELARAQKQPEG
Subject   7581  HVDSSSGNHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVSRTVEEIDYHC*IG*MASQIGKLPGESNEAFEARLKSLELARAQKQPEG  7871

Range 5: 7520 to 7741 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
183.0 bits(393) 0.0 70/74(95%) 0/74(0%) Plus/Plus
Query        2  VLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLH*GHWRVNFD*KLRPK*GPCIHCEGDVGRFEGFRG*PCC*R  223
                VLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLH*GHWRVNF+*KLRPK*GPCIHCEG V RFEGFRG*P C*R
Subject   7520  VLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLH*GHWRVNFN*KLRPK*GPCIHCEGGVRRFEGFRG*PYC*R  7741

Range 6: 7787 to 7870 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.3 bits(121) 0.0 28/28(100%) 0/28(0%) Plus/Plus
Query      269  ETPR*IK*GF*SPAKIAGVS*SSKAAGR  352
                ETPR*IK*GF*SPAKIAGVS*SSKAAGR
Subject   7787  ETPR*IK*GF*SPAKIAGVS*SSKAAGR  7870

Range 7: 7519 to 7731 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
175.2 bits(376) 0.0 67/71(94%) 0/71(0%) Minus/Minus
Query        1  HG*PLKPSNLPTSPSQWMQGPHLGRSFQSKLTLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNT  213
                +G*PLKPSNL T PSQWMQGPHLGRSFQ KLTLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNT
Subject   7519  YG*PLKPSNLLTPPSQWMQGPHLGRSFQLKLTLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNT  7731

Range 8: 7786 to 7872 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
66.1 bits(138) 0.0 28/29(97%) 0/29(0%) Minus/Minus
Query      268  DLPAAFEL*LTPAILAGLQKPHLIHRGVS  354
                +LPAAFEL*LTPAILAGLQKPHLIHRGVS
Subject   7786  NLPAAFEL*LTPAILAGLQKPHLIHRGVS  7872

Grapevine rupestris stem pitting associated virus isolate GRSPaV GG, complete genome

Sequence ID: JQ922417.1 Length: 8758 Number of Matches: 8

Range 1: 7520 to 7870 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
259.0 bits(559) 0.0 115/117(98%) 0/117(0%) Minus/Minus
Query        2  PSGCF*ALANSSDFSRASKASFDSPGSFPI*LAIQPI*Q**SISSTARLTPKAFKPPNISFTVDARASLGPQFSIKIDSPVALMKQPW*LPLLLST*ARIWMAITIPTKTRIPNRQY  352
                PSGCF*AL NSSDFSRASKASFDSPGSFPI*LAIQPI*Q**SISSTARLTPKAFKPPN SFTVDARASLGPQFSIKIDSPVALMKQPW*LPLLLST*ARIWMAITIPTKTRIPNRQY
Subject   7520  PSGCF*ALVNSSDFSRASKASFDSPGSFPI*LAIQPI*Q**SISSTARLTPKAFKPPNTSFTVDARASLGPQFSIKIDSPVALMKQPW*LPLLLST*ARIWMAITIPTKTRIPNRQY  7870

Range 2: 7521 to 7874 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
243.0 bits(524) 0.0 114/118(97%) 0/118(0%) Minus/Minus
Query        3  KTFRXXXXXXXLQRF*PGFKSLI*FTGEFPNLTCHSTNLTMIINFFNSTANP*SLQTSQHLLHSGCKGLTWAAVFNQN*LSSGPNEATLVIATTAVYMSKDLDGNYNSYQDQNSKQTI  356
                +TFRLLLSSS*LQRF*PGFKSLI*FTG FPNLTCHS NLTMIINFFNSTANP*SLQTSQHLLHSG KGLTWAAVFNQN*LSSGPNEATLVIATTAVYMSKDLDGNYNSYQDQNSKQTI
Subject   7521  RTFRLLLSSS*LQRF*PGFKSLI*FTG*FPNLTCHSANLTMIINFFNSTANP*SLQTSQHLLHSGRKGLTWAAVFNQN*LSSGPNEATLVIATTAVYMSKDLDGNYNSYQDQNSKQTI  7874

Range 3: 7519 to 7875 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
227.0 bits(489) 0.0 116/119(97%) 0/119(0%) Plus/Plus
Query        1  CIVCLEFWSW*EL*LPSKSLLM*TAVVAITKVASLGPLESQF*LKTAAQVRPLHPL*RRCWEV*RL*GLAXXXXXXXXXXXXXEWQVKLGNSPVNQMRLLKPG*NRWS*LELKSSRKVL  357
                CIVCLEFWSW*EL*LPSKSLLM*TAVVAITKVASLGPLESQF*LKTAAQVRPL PL*RRCWEV*RL*GLAVLLKKLIIIVKL EWQVKLGN PVNQMRLLKPG*NRWS*LELKSSRKVL
Subject   7519  CIVCLEFWSW*EL*LPSKSLLM*TAVVAITKVASLGPLESQF*LKTAAQVRPLRPL*RRCWEV*RL*GLAVLLKKLIIIVKLAEWQVKLGNYPVNQMRLLKPG*NRWS*LELKSSRKVL  7875

Range 4: 7520 to 7741 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
193.5 bits(416) 0.0 72/74(97%) 0/74(0%) Plus/Plus
Query        2  VLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLH*GHWRVNFD*KLRPK*GPCIHCEGDVGRFEGFRG*PCC*R  223
                VLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLH*GHWRVNFD*KLRPK*GPC+HCEG VGRFEGFRG*PCC*R
Subject   7520  VLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLH*GHWRVNFD*KLRPK*GPCVHCEGGVGRFEGFRG*PCC*R  7741

Range 5: 7787 to 7870 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.3 bits(110) 0.0 26/28(93%) 0/28(0%) Plus/Plus
Query      269  ETPR*IK*GF*SPAKIAGVS*SSKAAGR  352
                ET R*IK*GF*SPAKIAGV+*SSKAAGR
Subject   7787  ETTR*IK*GF*SPAKIAGVN*SSKAAGR  7870

Range 6: 7519 to 7731 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
182.5 bits(392) 0.0 69/71(97%) 0/71(0%) Minus/Minus
Query        1  HG*PLKPSNLPTSPSQWMQGPHLGRSFQSKLTLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNT  213
                HG*PLKPSNLPT PSQW QGPHLGRSFQSKLTLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNT
Subject   7519  HG*PLKPSNLPTPPSQWTQGPHLGRSFQSKLTLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNT  7731

Range 7: 7786 to 7872 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.0 bits(129) 0.0 27/29(93%) 0/29(0%) Minus/Minus
Query      268  DLPAAFEL*LTPAILAGLQKPHLIHRGVS  354
                +LPAAFEL*LTPAILAGLQKPHLIHR VS
Subject   7786  NLPAAFEL*LTPAILAGLQKPHLIHRVVS  7872

Range 8: 7581 to 7871 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
221.5 bits(477) 0.0 95/97(98%) 0/97(0%) Plus/Plus
Query       63  HVDSSSGNHQGCFIRATGESILIENCGPSEALASTVKEMLGGLKALGVSRAVEEIDYHC*IG*MASQIGKLPGESNEAFEARLKSLELARAQKQPEG  353
                HVDSSSGNHQGCFIRATGESILIENCGPSEALASTVKE+LGGLKALGVSRAVEEIDYHC*IG*MASQIGKLPGESNEAFEARLKSLEL RAQKQPEG
Subject   7581  HVDSSSGNHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVSRAVEEIDYHC*IG*MASQIGKLPGESNEAFEARLKSLELTRAQKQPEG  7871

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: Hiz3

Sequence ID: AB277785.1 Length: 2876 Number of Matches: 8

Range 1: 1776 to 2126 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
258.6 bits(558) 0.0 115/117(98%) 0/117(0%) Minus/Minus
Query        2  PSGCF*ALANSSDFSRASKASFDSPGSFPI*LAIQPI*Q**SISSTARLTPKAFKPPNISFTVDARASLGPQFSIKIDSPVALMKQPW*LPLLLST*ARIWMAITIPTKTRIPNRQY  352
                PSGCF*ALANSSDFSRASKASFDSPGSFPI*LAIQPI*Q**SISSTARLTPKAFKPP+ SFTVDARASLGPQFSIKIDSPVALMKQPW*LPLLLST*ARIWMAITIPTKTRIPNRQY
Subject   1776  PSGCF*ALANSSDFSRASKASFDSPGSFPI*LAIQPI*Q**SISSTARLTPKAFKPPSTSFTVDARASLGPQFSIKIDSPVALMKQPW*LPLLLST*ARIWMAITIPTKTRIPNRQY  2126

Range 2: 1777 to 2130 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
249.9 bits(539) 0.0 115/118(97%) 0/118(0%) Minus/Minus
Query        3  KTFRXXXXXXXLQRF*PGFKSLI*FTGEFPNLTCHSTNLTMIINFFNSTANP*SLQTSQHLLHSGCKGLTWAAVFNQN*LSSGPNEATLVIATTAVYMSKDLDGNYNSYQDQNSKQTI  356
                +TFRLLLSSS*LQRF*PGFKSLI*FTGEFPNLTCHS NLTMIINFFNSTANP*SLQTSQHLLHSGCKGLTWAAV NQN*LSSGPNEATLVIATTAVYMSKDLDGNYNSYQDQNSKQTI
Subject   1777  RTFRLLLSSS*LQRF*PGFKSLI*FTGEFPNLTCHSANLTMIINFFNSTANP*SLQTSQHLLHSGCKGLTWAAVLNQN*LSSGPNEATLVIATTAVYMSKDLDGNYNSYQDQNSKQTI  2130

Range 3: 1775 to 2131 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
232.0 bits(500) 0.0 117/119(98%) 0/119(0%) Plus/Plus
Query        1  CIVCLEFWSW*EL*LPSKSLLM*TAVVAITKVASLGPLESQF*LKTAAQVRPLHPL*RRCWEV*RL*GLAXXXXXXXXXXXXXEWQVKLGNSPVNQMRLLKPG*NRWS*LELKSSRKVL  357
                CIVCLEFWSW*EL*LPSKSLLM*TAVVAITKVASLGPLESQF*L+TAAQVRPLHPL*RRCWEV*RL*GLAVLLKKLIIIVKL EWQVKLGNSPVNQMRLLKPG*NRWS*LELKSSRKVL
Subject   1775  CIVCLEFWSW*EL*LPSKSLLM*TAVVAITKVASLGPLESQF*LRTAAQVRPLHPL*RRCWEV*RL*GLAVLLKKLIIIVKLAEWQVKLGNSPVNQMRLLKPG*NRWS*LELKSSRKVL  2131

Range 4: 1776 to 1997 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
190.3 bits(409) 0.0 71/74(96%) 0/74(0%) Plus/Plus
Query        2  VLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLH*GHWRVNFD*KLRPK*GPCIHCEGDVGRFEGFRG*PCC*R  223
                VLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLH*GHWRVNFD*+LRPK*GPCIHCEG  GRFEGFRG*PCC*R
Subject   1776  VLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLH*GHWRVNFD*ELRPK*GPCIHCEGGAGRFEGFRG*PCC*R  1997

Range 5: 2043 to 2126 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.3 bits(121) 0.0 28/28(100%) 0/28(0%) Plus/Plus
Query      269  ETPR*IK*GF*SPAKIAGVS*SSKAAGR  352
                ETPR*IK*GF*SPAKIAGVS*SSKAAGR
Subject   2043  ETPR*IK*GF*SPAKIAGVS*SSKAAGR  2126

Range 6: 1775 to 1987 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
179.3 bits(385) 0.0 68/71(96%) 0/71(0%) Minus/Minus
Query        1  HG*PLKPSNLPTSPSQWMQGPHLGRSFQSKLTLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNT  213
                HG*PLKPSNLP  PSQWMQGPHLGRS QSKLTLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNT
Subject   1775  HG*PLKPSNLPAPPSQWMQGPHLGRSSQSKLTLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNT  1987

Range 7: 2042 to 2128 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
66.1 bits(138) 0.0 28/29(97%) 0/29(0%) Minus/Minus
Query      268  DLPAAFEL*LTPAILAGLQKPHLIHRGVS  354
                +LPAAFEL*LTPAILAGLQKPHLIHRGVS
Subject   2042  NLPAAFEL*LTPAILAGLQKPHLIHRGVS  2128

Range 8: 1837 to 2127 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
223.3 bits(481) 0.0 96/97(99%) 0/97(0%) Plus/Plus
Query       63  HVDSSSGNHQGCFIRATGESILIENCGPSEALASTVKEMLGGLKALGVSRAVEEIDYHC*IG*MASQIGKLPGESNEAFEARLKSLELARAQKQPEG  353
                HVDSSSGNHQGCFIRATGESILIENCGPSEALASTVKE+LGGLKALGVSRAVEEIDYHC*IG*MASQIGKLPGESNEAFEARLKSLELARAQKQPEG
Subject   1837  HVDSSSGNHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVSRAVEEIDYHC*IG*MASQIGKLPGESNEAFEARLKSLELARAQKQPEG  2127

Grapevine rupestris stem pitting associated virus isolate ISA BR replicase, 24.4 kDa protein, 12.8 kDa protein, 8.4 kDa protein, and 28 kDa protein genes, complete cds

Sequence ID: KX925555.1 Length: 8659 Number of Matches: 8

Range 1: 7504 to 7854 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
258.6 bits(558) 0.0 115/117(98%) 0/117(0%) Minus/Minus
Query        2  PSGCF*ALANSSDFSRASKASFDSPGSFPI*LAIQPI*Q**SISSTARLTPKAFKPPNISFTVDARASLGPQFSIKIDSPVALMKQPW*LPLLLST*ARIWMAITIPTKTRIPNRQY  352
                PSGCF*ALANSSDFSRASKASFDSPGSFPI*LAIQPI Q**SISSTARLTPKAFKPPN SFTVDARASLGPQFSIKIDSPVALMKQPW*LPLLLST*ARIWMAITIPTKTRIPNRQY
Subject   7504  PSGCF*ALANSSDFSRASKASFDSPGSFPI*LAIQPIQQ**SISSTARLTPKAFKPPNTSFTVDARASLGPQFSIKIDSPVALMKQPW*LPLLLST*ARIWMAITIPTKTRIPNRQY  7854

Range 2: 7505 to 7858 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
249.9 bits(539) 0.0 115/118(97%) 0/118(0%) Minus/Minus
Query        3  KTFRXXXXXXXLQRF*PGFKSLI*FTGEFPNLTCHSTNLTMIINFFNSTANP*SLQTSQHLLHSGCKGLTWAAVFNQN*LSSGPNEATLVIATTAVYMSKDLDGNYNSYQDQNSKQTI  356
                +TFRLLLSSS*LQRF*PGFKSLI*FTGEFPNLTCHS N TMIINFFNSTANP*SLQTSQHLLHSGCKGLTWAAVFNQN*LSSGPNEATLVIATTAVYMSKDLDGNYNSYQDQNSKQTI
Subject   7505  RTFRLLLSSS*LQRF*PGFKSLI*FTGEFPNLTCHSANSTMIINFFNSTANP*SLQTSQHLLHSGCKGLTWAAVFNQN*LSSGPNEATLVIATTAVYMSKDLDGNYNSYQDQNSKQTI  7858

Range 3: 7503 to 7859 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
233.4 bits(503) 0.0 117/119(98%) 0/119(0%) Plus/Plus
Query        1  CIVCLEFWSW*EL*LPSKSLLM*TAVVAITKVASLGPLESQF*LKTAAQVRPLHPL*RRCWEV*RL*GLAXXXXXXXXXXXXXEWQVKLGNSPVNQMRLLKPG*NRWS*LELKSSRKVL  357
                CIVCLEFWSW*EL*LPSKSLLM*TAVVAITKVASLGPLESQF*LKTAAQVRPLHPL*RRCWEV*RL*GLAVLLKKLIIIV+L EWQVKLGNSPVNQMRLLKPG*NRWS*LELKSSRKVL
Subject   7503  CIVCLEFWSW*EL*LPSKSLLM*TAVVAITKVASLGPLESQF*LKTAAQVRPLHPL*RRCWEV*RL*GLAVLLKKLIIIVELAEWQVKLGNSPVNQMRLLKPG*NRWS*LELKSSRKVL  7859

Range 4: 7504 to 7725 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.0 bits(417) 0.0 73/74(99%) 0/74(0%) Plus/Plus
Query        2  VLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLH*GHWRVNFD*KLRPK*GPCIHCEGDVGRFEGFRG*PCC*R  223
                VLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLH*GHWRVNFD*KLRPK*GPCIHCEG VGRFEGFRG*PCC*R
Subject   7504  VLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLH*GHWRVNFD*KLRPK*GPCIHCEGGVGRFEGFRG*PCC*R  7725

Range 5: 7771 to 7854 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.3 bits(121) 0.0 28/28(100%) 0/28(0%) Plus/Plus
Query      269  ETPR*IK*GF*SPAKIAGVS*SSKAAGR  352
                ETPR*IK*GF*SPAKIAGVS*SSKAAGR
Subject   7771  ETPR*IK*GF*SPAKIAGVS*SSKAAGR  7854

Range 6: 7503 to 7715 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
185.3 bits(398) 0.0 70/71(99%) 0/71(0%) Minus/Minus
Query        1  HG*PLKPSNLPTSPSQWMQGPHLGRSFQSKLTLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNT  213
                HG*PLKPSNLPT PSQWMQGPHLGRSFQSKLTLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNT
Subject   7503  HG*PLKPSNLPTPPSQWMQGPHLGRSFQSKLTLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNT  7715

Range 7: 7770 to 7856 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
66.1 bits(138) 0.0 28/29(97%) 0/29(0%) Minus/Minus
Query      268  DLPAAFEL*LTPAILAGLQKPHLIHRGVS  354
                +LPAAFEL*LTPAILAGLQKPHLIHRGVS
Subject   7770  NLPAAFEL*LTPAILAGLQKPHLIHRGVS  7856

Range 8: 7565 to 7855 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
223.3 bits(481) 0.0 96/97(99%) 0/97(0%) Plus/Plus
Query       63  HVDSSSGNHQGCFIRATGESILIENCGPSEALASTVKEMLGGLKALGVSRAVEEIDYHC*IG*MASQIGKLPGESNEAFEARLKSLELARAQKQPEG  353
                HVDSSSGNHQGCFIRATGESILIENCGPSEALASTVKE+LGGLKALGVSRAVEEIDYHC*IG*MASQIGKLPGESNEAFEARLKSLELARAQKQPEG
Subject   7565  HVDSSSGNHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVSRAVEEIDYHC*IG*MASQIGKLPGESNEAFEARLKSLELARAQKQPEG  7855

Nucleotide Sequence (449 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 10 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
45
90
135
180
225
270
315
360
405
449

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate Tannat Rspav1, complete genome

Sequence ID: KR528585.1 Length: 8595 Number of Matches: 7

Range 1: 1652 to 2098 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
332.8 bits(720) 0.0 141/149(95%) 0/149(0%) Plus/Minus
Query        1  GNLKRLLEPCLHCNQLIEAPQGLN*LGELVHLAHFSRPIWEWKHPLSQNP*QKLWSS*AEPQEVLPVMLQTDKL**HHNQDQQRTMPCPSEI*GWTFA*GETIGGHKN*NNE*GLLCA*KGPPYRNFLPHA*HSRPPKT*TILTAQWLL  447
                GNLKRLLEPCLHCNQLIEAPQGLN*LGELVHLAHFSR IWEWKHPLSQNP*Q+LWSS*AEPQEVLPVMLQTDKL*  HNQDQQRTMPC SEI*GWTFA*GETIGGHKN*+NE*GLLCA*KGPPYRNF PHA*HSRPPKT*TILTAQ LL
Subject   1652  GNLKRLLEPCLHCNQLIEAPQGLN*LGELVHLAHFSRSIWEWKHPLSQNP*QRLWSS*AEPQEVLPVMLQTDKL*QPHNQDQQRTMPCASEI*GWTFA*GETIGGHKN*SNE*GLLCA*KGPPYRNF*PHA*HSRPPKT*TILTAQ*LL  2098

Range 2: 1651 to 2097 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
328.7 bits(711) 0.0 141/149(95%) 0/149(0%) Minus/Plus
Query        2  LEATGQSKLFRFLVDDCVMREVRSSYKVGLFKHIKALTHCFNSCGLQWFLLRQRSNLKFLKDRASSFADLDCDVIKVYQFVTSQAILPEALLSLTKVFVRDSDSKGVSIPILVSRNELNELALPANSALEEPQSVDCNAGRVQASVSSS  448
                LEATGQSKLFRFLVDDCVMREVRSSYKVGLFKHIKALTHCFNSCGLQWFLLRQRSNLKFLK RASSFADLDC+V+K YQFVTSQAILPEALLSLTKVFVRDSDSKGVSIP L+SRNE NELA PANSALEEPQSVDCNAGRVQASVSSS
Subject   1651  LEATGQSKLFRFLVDDCVMREVRSSYKVGLFKHIKALTHCFNSCGLQWFLLRQRSNLKFLKHRASSFADLDCEVVKAYQFVTSQAILPEALLSLTKVFVRDSDSKGVSIPRLISRNEPNELAHPANSALEEPQSVDCNAGRVQASVSSS  2097

Range 3: 1651 to 2097 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
320.4 bits(693) 0.0 139/149(93%) 0/149(0%) Plus/Minus
Query        2  GT*NACLNPACIAIN*LRLLKG*ISWES*FI*LISRDQYGNGNTL*VRIPDKNFGQAKQSLRKYCL*CYKLINFDDITIKISKGRCPVLQKFEVGPLPKEKPLEATRIKTMSEGFYVLKKAHLIGTSYLTHNTVVHQKPEQF*LPSGF*  448
                GT*NACLNPACIAIN*LRLLKG*ISW S*FI LISRDQ GNGNTL*VRIPDK+FGQAKQSLRKYCL*CYKLI+FD++TIKISKGRCPVLQKFEVGPLPKEKPLEATRIK MSEGFYVLKKAHLIGTS LTHNTVVHQKPEQF*LPS F*
Subject   1651  GT*NACLNPACIAIN*LRLLKG*ISWVS*FIWLISRDQSGNGNTL*VRIPDKDFGQAKQSLRKYCL*CYKLISFDNLTIKISKGRCPVLQKFEVGPLPKEKPLEATRIKAMSEGFYVLKKAHLIGTSNLTHNTVVHQKPEQF*LPSSF*  2097

Range 4: 1652 to 2098 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
306.7 bits(663) 0.0 137/149(92%) 0/149(0%) Minus/Plus
Query        1  *KPLGSQNCSGFWWTTVLCVR*EVPIRWAFLST*KPSLIVLILVASNGFSLGKGPTSNF*RTGHRPLLILIVMSSKFISL*HHRQYFLRLCLA*PKFLSGILTQRVFPFPYWSREMS*MN*LSQLIQPLRSLNQLIAMQAGFKQAFQVP  447
                *K LGSQNCSGFWWTTVLCVR EVPIRWAFLST*KPSLI LILVASNGFSLGKGPTSNF* TGHRPLLILIV  SK ISL*HHRQYFLRLCLA*PK LSGILTQRVFPFP  SREMS MN*L+QLIQPLRSLNQLIAMQAGFKQAFQVP
Subject   1652  *KLLGSQNCSGFWWTTVLCVRLEVPIRWAFLST*KPSLIALILVASNGFSLGKGPTSNF*STGHRPLLILIVRLSKLISL*HHRQYFLRLCLA*PKSLSGILTQRVFPFPD*SREMSQMN*LTQLIQPLRSLNQLIAMQAGFKQAFQVP  2098

Range 5: 1653 to 2012 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
244.8 bits(528) 0.0 111/120(92%) 0/120(0%) Minus/Plus
Query       87  RSHWAVKIVQVFGGRLCYA*GKKFL*GGPF*AHKSPHSLF*FLWPPMVSP*AKVQPQISEGQGIVLC*S*L*CHQSLSVCNITGNTS*GSA*LDQSFCQGF*LKGCFHSHIGLEK*AK*T  446
                RS+WAVKIVQVFGGRLCYA*G KFL*GGPF*AHKSPHSL *FLWPPMVSP*AKVQPQISE QGIVLC*S*L*  QSLSVCNITGNTS*GSA*LDQS CQGF*LKGCFHS I LEK*AK*T
Subject   1653  RSYWAVKIVQVFGGRLCYA*G*KFL*GGPF*AHKSPHSLL*FLWPPMVSP*AKVQPQISEAQGIVLC*S*L*GCQSLSVCNITGNTS*GSA*LDQSLCQGF*LKGCFHSQIDLEK*AK*T  2012

Range 6: 2055 to 2096 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.0 bits(70) 0.0 14/14(100%) 0/14(0%) Minus/Plus
Query        3  *LQCRQGSSKRFKF  44
                *LQCRQGSSKRFKF
Subject   2055  *LQCRQGSSKRFKF  2096

Range 7: 1650 to 2060 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
257.2 bits(555) 0.0 130/137(95%) 0/137(0%) Plus/Minus
Query       39  QSTD*GSSRAELAGRASSFSSFLETNMGMETPFESESLTKTLVKLSRASGSIACDVTN**TLMTSQSRSAKDDALSFXXXXXXXXXXXXHWRPQELKQ*VRAFMCLKRPTL*ELLTSRITQSSTKNLNNFDCPVASS  449
                QSTD*GSSRAELAG ASSF SFLE N+GMETPFESESLTKTLVKLSRASGSIACDVTN** L TSQSRSAKDDAL FRNLRLDLCLRRNHWRPQELKQ*VRAFMCLKRPTL*ELLTSRITQSSTKNLNNFDCPVASS
Subject   1650  QSTD*GSSRAELAG*ASSFGSFLEINLGMETPFESESLTKTLVKLSRASGSIACDVTN**ALTTSQSRSAKDDALCFRNLRLDLCLRRNHWRPQELKQ*VRAFMCLKRPTL*ELLTSRITQSSTKNLNNFDCPVASS  2060

Grapevine rupestris stem pitting associated virus isolate GRSPaV GG, complete genome

Sequence ID: JQ922417.1 Length: 8758 Number of Matches: 7

Range 1: 1670 to 2116 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
331.4 bits(717) 0.0 140/149(94%) 0/149(0%) Plus/Minus
Query        1  GNLKRLLEPCLHCNQLIEAPQGLN*LGELVHLAHFSRPIWEWKHPLSQNP*QKLWSS*AEPQEVLPVMLQTDKL**HHNQDQQRTMPCPSEI*GWTFA*GETIGGHKN*NNE*GLLCA*KGPPYRNFLPHA*HSRPPKT*TILTAQWLL  447
                GNLKRLLEPCLHCNQLIEAP GLN*LGELVHLAH SRPIWEWKHPLSQNP*Q+LWSS*AEPQEVLP MLQTDKL** HNQDQQRTMPC SEI*GWTFA*GETIGGHKN*+NE*GLLCA*KGPPYRNF PHA*HSRPPKT*TILTAQ LL
Subject   1670  GNLKRLLEPCLHCNQLIEAPPGLN*LGELVHLAHLSRPIWEWKHPLSQNP*QRLWSS*AEPQEVLPAMLQTDKL**PHNQDQQRTMPCSSEI*GWTFA*GETIGGHKN*SNE*GLLCA*KGPPYRNF*PHA*HSRPPKT*TILTAQ*LL  2116

Range 2: 1669 to 2115 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
326.9 bits(707) 0.0 141/149(95%) 0/149(0%) Minus/Plus
Query        2  LEATGQSKLFRFLVDDCVMREVRSSYKVGLFKHIKALTHCFNSCGLQWFLLRQRSNLKFLKDRASSFADLDCDVIKVYQFVTSQAILPEALLSLTKVFVRDSDSKGVSIPILVSRNELNELALPANSALEEPQSVDCNAGRVQASVSSS  448
                L ATGQSKLFRFLVDDCVMREVRSSYKVGLFKHIKALTHCFNSCGLQWFLLRQRSNLKFLK+RASSFADLDC+VIKVY+FVTSQAILPEALLSLTKVFVRDSDSKGVSIP LVSR+ELNELA PANS LEEPQSVDCNAGRVQASVSSS
Subject   1669  LAATGQSKLFRFLVDDCVMREVRSSYKVGLFKHIKALTHCFNSCGLQWFLLRQRSNLKFLKNRASSFADLDCEVIKVYRFVTSQAILPEALLSLTKVFVRDSDSKGVSIPRLVSRDELNELAHPANSVLEEPQSVDCNAGRVQASVSSS  2115

Range 3: 1678 to 2115 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
311.3 bits(673) 0.0 135/146(92%) 0/146(0%) Plus/Minus
Query        2  GT*NACLNPACIAIN*LRLLKG*ISWES*FI*LISRDQYGNGNTL*VRIPDKNFGQAKQSLRKYCL*CYKLINFDDITIKISKGRCPVLQKFEVGPLPKEKPLEATRIKTMSEGFYVLKKAHLIGTSYLTHNTVVHQKPEQF*LPS  439
                GT*NACLNPACIAIN*LRLL+ *ISW S*FI*LISRDQ GNGNTL*VRIPDK+FGQAKQSLRKYCL CYK INFD++TIKISKGRCPVLQKFEVGPLPKEKPLEATRIK MSEGFYVLKKAHLIGTS LTHNTVVHQKPEQF*LPS
Subject   1678  GT*NACLNPACIAIN*LRLLQD*ISWVS*FI*LISRDQSGNGNTL*VRIPDKDFGQAKQSLRKYCLRCYKPINFDNLTIKISKGRCPVLQKFEVGPLPKEKPLEATRIKAMSEGFYVLKKAHLIGTSNLTHNTVVHQKPEQF*LPS  2115

Range 4: 1679 to 2116 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
308.1 bits(666) 0.0 135/146(92%) 0/146(0%) Minus/Plus
Query        1  LGSQNCSGFWWTTVLCVR*EVPIRWAFLST*KPSLIVLILVASNGFSLGKGPTSNF*RTGHRPLLILIVMSSKFISL*HHRQYFLRLCLA*PKFLSGILTQRVFPFPYWSREMS*MN*LSQLIQPLRSLNQLIAMQAGFKQAFQVP  438
                LGSQNCSGFWWTTVLCVR EVPIRWAFLST*KPSLI LILVASNGFSLGKGPTSNF*RTGHRPLLILIV  SKFI L*H RQYFLRLCLA*PK LSGILTQRVFPFP WSREMS*MN*L+QLIQ  RSLNQLIAMQAGFKQAFQVP
Subject   1679  LGSQNCSGFWWTTVLCVRLEVPIRWAFLST*KPSLIALILVASNGFSLGKGPTSNF*RTGHRPLLILIVRLSKFIGL*HRRQYFLRLCLA*PKSLSGILTQRVFPFPDWSREMS*MN*LTQLIQSWRSLNQLIAMQAGFKQAFQVP  2116

Range 5: 1674 to 2030 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
243.5 bits(525) 0.0 109/119(92%) 0/119(0%) Minus/Plus
Query       87  SHWAVKIVQVFGGRLCYA*GKKFL*GGPF*AHKSPHSLF*FLWPPMVSP*AKVQPQISEGQGIVLC*S*L*CHQSLSVCNITGNTS*GSA*LDQSFCQGF*LKGCFHSHIGLEK*AK*T  443
                S+WAVKIVQVFGGRLCYA*G KFL*GGPF*AHKSPHSL *FLWPPMVSP*AKVQPQISE QGIVLC*S*L* +QSLSVCNI GNTS*GSA*LDQS CQGF*LKGCFHS IGLE+*AK*T
Subject   1674  SYWAVKIVQVFGGRLCYA*G*KFL*GGPF*AHKSPHSLL*FLWPPMVSP*AKVQPQISEEQGIVLC*S*L*GYQSLSVCNIAGNTS*GSA*LDQSLCQGF*LKGCFHSQIGLER*AK*T  2030

Range 6: 2073 to 2114 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.0 bits(70) 0.0 14/14(100%) 0/14(0%) Minus/Plus
Query        3  *LQCRQGSSKRFKF  44
                *LQCRQGSSKRFKF
Subject   2073  *LQCRQGSSKRFKF  2114

Range 7: 1668 to 2078 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
255.4 bits(551) 0.0 129/137(94%) 0/137(0%) Plus/Minus
Query       39  QSTD*GSSRAELAGRASSFSSFLETNMGMETPFESESLTKTLVKLSRASGSIACDVTN**TLMTSQSRSAKDDALSFXXXXXXXXXXXXHWRPQELKQ*VRAFMCLKRPTL*ELLTSRITQSSTKNLNNFDCPVASS  449
                QSTD*GSSR ELAG ASSFSS LETN+GMETPFESESLTKTLVKLSRASGSIACDVTN *TL+TSQSRSAKDDAL FRNLRLDLCLRRNHWRPQELKQ*VRAFMCLKRPTL*ELLTSRITQSSTKNLNNFDCPVA+S
Subject   1668  QSTD*GSSRTELAG*ASSFSSSLETNLGMETPFESESLTKTLVKLSRASGSIACDVTNR*TLITSQSRSAKDDALFFRNLRLDLCLRRNHWRPQELKQ*VRAFMCLKRPTL*ELLTSRITQSSTKNLNNFDCPVAAS  2078

Rupestris stem pitting associated virus 1, complete genome

Sequence ID: AF057136.1 Length: 8744 Number of Matches: 7

Range 1: 1670 to 2116 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
330.5 bits(715) 0.0 143/149(96%) 0/149(0%) Minus/Plus
Query        2  LEATGQSKLFRFLVDDCVMREVRSSYKVGLFKHIKALTHCFNSCGLQWFLLRQRSNLKFLKDRASSFADLDCDVIKVYQFVTSQAILPEALLSLTKVFVRDSDSKGVSIPILVSRNELNELALPANSALEEPQSVDCNAGRVQASVSSS  448
                LEATGQSKLFRFLVDDC MREVRSSYKVGLFKHIKALTHCFNSCGLQWFLLRQRSNLKFLKDRASSFADLDC+VIKVYQ VTSQAILPEALLSLTKVFVRDSDSKGVSIP LVSRNEL ELA PANSALEEPQSVDCNAGRVQASVSSS
Subject   1670  LEATGQSKLFRFLVDDCAMREVRSSYKVGLFKHIKALTHCFNSCGLQWFLLRQRSNLKFLKDRASSFADLDCEVIKVYQLVTSQAILPEALLSLTKVFVRDSDSKGVSIPRLVSRNELEELAHPANSALEEPQSVDCNAGRVQASVSSS  2116

Range 2: 1671 to 2117 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
327.3 bits(708) 0.0 140/149(94%) 0/149(0%) Plus/Minus
Query        1  GNLKRLLEPCLHCNQLIEAPQGLN*LGELVHLAHFSRPIWEWKHPLSQNP*QKLWSS*AEPQEVLPVMLQTDKL**HHNQDQQRTMPCPSEI*GWTFA*GETIGGHKN*NNE*GLLCA*KGPPYRNFLPHA*HSRPPKT*TILTAQWLL  447
                GNLKRLLEPCLH NQLIEAPQGLN*LGELV LAHFSRPIWEWKHPLSQNP*Q+LWSS*AEPQEVLPVMLQ DKL** HNQDQQRTMPCPSEI*GWTFA*G TIGGHKN*+NE*GLLCA*KGPPYRNF PHA*HSRPPKT*TILTAQ LL
Subject   1671  GNLKRLLEPCLHYNQLIEAPQGLN*LGELVPLAHFSRPIWEWKHPLSQNP*QRLWSS*AEPQEVLPVMLQADKL**PHNQDQQRTMPCPSEI*GWTFA*GGTIGGHKN*SNE*GLLCA*KGPPYRNF*PHA*HSRPPKT*TILTAQ*LL  2117

Range 3: 1670 to 2116 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
318.1 bits(688) 0.0 137/149(92%) 0/149(0%) Plus/Minus
Query        2  GT*NACLNPACIAIN*LRLLKG*ISWES*FI*LISRDQYGNGNTL*VRIPDKNFGQAKQSLRKYCL*CYKLINFDDITIKISKGRCPVLQKFEVGPLPKEKPLEATRIKTMSEGFYVLKKAHLIGTSYLTHNTVVHQKPEQF*LPSGF*  448
                GT*NACLNPACI IN*LRLLKG*ISW S*F+*LISRDQ GNGNTL*VRIPDK+FGQAKQSLRKYCL*CYKLINFD++TIKISKGRCPVLQKFEVGPLPKE+PLEATRIK MSEGFYVLKKAHLIGTS LTH+TVVHQKPEQF*LPS F*
Subject   1670  GT*NACLNPACITIN*LRLLKG*ISWVS*FL*LISRDQSGNGNTL*VRIPDKDFGQAKQSLRKYCL*CYKLINFDNLTIKISKGRCPVLQKFEVGPLPKEEPLEATRIKAMSEGFYVLKKAHLIGTSNLTHSTVVHQKPEQF*LPSSF*  2116

Range 4: 1671 to 2117 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
313.1 bits(677) 0.0 138/149(93%) 0/149(0%) Minus/Plus
Query        1  *KPLGSQNCSGFWWTTVLCVR*EVPIRWAFLST*KPSLIVLILVASNGFSLGKGPTSNF*RTGHRPLLILIVMSSKFISL*HHRQYFLRLCLA*PKFLSGILTQRVFPFPYWSREMS*MN*LSQLIQPLRSLNQLIAMQAGFKQAFQVP  447
                *K LGSQNCSGFWWTTVLCVR EVPIRWAFLST*KPSLI LILVASNG SLGKGPTSNF*RTGHRPLLILIV  SKFISL*HHRQYFLRLCLA*PK LSGILTQRVFPFP WSREMS* N*L+QLIQPLRSLNQLI MQAGFKQAFQVP
Subject   1671  *KLLGSQNCSGFWWTTVLCVRLEVPIRWAFLST*KPSLIALILVASNGSSLGKGPTSNF*RTGHRPLLILIVRLSKFISL*HHRQYFLRLCLA*PKSLSGILTQRVFPFPDWSREMS*RN*LTQLIQPLRSLNQLIVMQAGFKQAFQVP  2117

Range 5: 1669 to 2079 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
259.0 bits(559) 0.0 131/137(96%) 0/137(0%) Plus/Minus
Query       39  QSTD*GSSRAELAGRASSFSSFLETNMGMETPFESESLTKTLVKLSRASGSIACDVTN**TLMTSQSRSAKDDALSFXXXXXXXXXXXXHWRPQELKQ*VRAFMCLKRPTL*ELLTSRITQSSTKNLNNFDCPVASS  449
                QSTD*GSSRAELAG ASS SSFLETN+GMETPFESESLTKTLVKLSRASGSIACDVT+**TL+TSQSRSAKDDALSFRNLRLDLCLRRNHWRPQELKQ*VRAFMCLKRPTL*ELLTSRI QSSTKNLNNFDCPVASS
Subject   1669  QSTD*GSSRAELAG*ASSSSSFLETNLGMETPFESESLTKTLVKLSRASGSIACDVTS**TLITSQSRSAKDDALSFRNLRLDLCLRRNHWRPQELKQ*VRAFMCLKRPTL*ELLTSRIAQSSTKNLNNFDCPVASS  2079

Range 6: 1669 to 2031 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
247.1 bits(533) 0.0 110/121(91%) 0/121(0%) Minus/Plus
Query       87  ARSHWAVKIVQVFGGRLCYA*GKKFL*GGPF*AHKSPHSLF*FLWPPMVSP*AKVQPQISEGQGIVLC*S*L*CHQSLSVCNITGNTS*GSA*LDQSFCQGF*LKGCFHSHIGLEK*AK*T  449
                ARS+WAVKIVQVFGGRLCYA*G KFL*GGPF*AHKSPHSL *FLWPPMV P*AKVQPQISEGQGIVLC*S*L* +QSLS CNITGNTS*GSA*LDQS CQGF*LKGCFHS IGLEK*A+ T
Subject   1669  ARSYWAVKIVQVFGGRLCYA*G*KFL*GGPF*AHKSPHSLL*FLWPPMVPP*AKVQPQISEGQGIVLC*S*L*GYQSLSACNITGNTS*GSA*LDQSLCQGF*LKGCFHSQIGLEK*ARGT  2031

Range 7: 2074 to 2115 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.9 bits(61) 0.0 13/14(93%) 0/14(0%) Minus/Plus
Query        3  *LQCRQGSSKRFKF  44
                *L CRQGSSKRFKF
Subject   2074  *L*CRQGSSKRFKF  2115

Rupestris stem pitting associated virus 1, complete genome

Sequence ID: NC_001948.1 Length: 8744 Number of Matches: 7

Range 1: 1670 to 2116 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
330.5 bits(715) 0.0 143/149(96%) 0/149(0%) Minus/Plus
Query        2  LEATGQSKLFRFLVDDCVMREVRSSYKVGLFKHIKALTHCFNSCGLQWFLLRQRSNLKFLKDRASSFADLDCDVIKVYQFVTSQAILPEALLSLTKVFVRDSDSKGVSIPILVSRNELNELALPANSALEEPQSVDCNAGRVQASVSSS  448
                LEATGQSKLFRFLVDDC MREVRSSYKVGLFKHIKALTHCFNSCGLQWFLLRQRSNLKFLKDRASSFADLDC+VIKVYQ VTSQAILPEALLSLTKVFVRDSDSKGVSIP LVSRNEL ELA PANSALEEPQSVDCNAGRVQASVSSS
Subject   1670  LEATGQSKLFRFLVDDCAMREVRSSYKVGLFKHIKALTHCFNSCGLQWFLLRQRSNLKFLKDRASSFADLDCEVIKVYQLVTSQAILPEALLSLTKVFVRDSDSKGVSIPRLVSRNELEELAHPANSALEEPQSVDCNAGRVQASVSSS  2116

Range 2: 1671 to 2117 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
327.3 bits(708) 0.0 140/149(94%) 0/149(0%) Plus/Minus
Query        1  GNLKRLLEPCLHCNQLIEAPQGLN*LGELVHLAHFSRPIWEWKHPLSQNP*QKLWSS*AEPQEVLPVMLQTDKL**HHNQDQQRTMPCPSEI*GWTFA*GETIGGHKN*NNE*GLLCA*KGPPYRNFLPHA*HSRPPKT*TILTAQWLL  447
                GNLKRLLEPCLH NQLIEAPQGLN*LGELV LAHFSRPIWEWKHPLSQNP*Q+LWSS*AEPQEVLPVMLQ DKL** HNQDQQRTMPCPSEI*GWTFA*G TIGGHKN*+NE*GLLCA*KGPPYRNF PHA*HSRPPKT*TILTAQ LL
Subject   1671  GNLKRLLEPCLHYNQLIEAPQGLN*LGELVPLAHFSRPIWEWKHPLSQNP*QRLWSS*AEPQEVLPVMLQADKL**PHNQDQQRTMPCPSEI*GWTFA*GGTIGGHKN*SNE*GLLCA*KGPPYRNF*PHA*HSRPPKT*TILTAQ*LL  2117

Range 3: 1670 to 2116 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
318.1 bits(688) 0.0 137/149(92%) 0/149(0%) Plus/Minus
Query        2  GT*NACLNPACIAIN*LRLLKG*ISWES*FI*LISRDQYGNGNTL*VRIPDKNFGQAKQSLRKYCL*CYKLINFDDITIKISKGRCPVLQKFEVGPLPKEKPLEATRIKTMSEGFYVLKKAHLIGTSYLTHNTVVHQKPEQF*LPSGF*  448
                GT*NACLNPACI IN*LRLLKG*ISW S*F+*LISRDQ GNGNTL*VRIPDK+FGQAKQSLRKYCL*CYKLINFD++TIKISKGRCPVLQKFEVGPLPKE+PLEATRIK MSEGFYVLKKAHLIGTS LTH+TVVHQKPEQF*LPS F*
Subject   1670  GT*NACLNPACITIN*LRLLKG*ISWVS*FL*LISRDQSGNGNTL*VRIPDKDFGQAKQSLRKYCL*CYKLINFDNLTIKISKGRCPVLQKFEVGPLPKEEPLEATRIKAMSEGFYVLKKAHLIGTSNLTHSTVVHQKPEQF*LPSSF*  2116

Range 4: 1671 to 2117 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
313.1 bits(677) 0.0 138/149(93%) 0/149(0%) Minus/Plus
Query        1  *KPLGSQNCSGFWWTTVLCVR*EVPIRWAFLST*KPSLIVLILVASNGFSLGKGPTSNF*RTGHRPLLILIVMSSKFISL*HHRQYFLRLCLA*PKFLSGILTQRVFPFPYWSREMS*MN*LSQLIQPLRSLNQLIAMQAGFKQAFQVP  447
                *K LGSQNCSGFWWTTVLCVR EVPIRWAFLST*KPSLI LILVASNG SLGKGPTSNF*RTGHRPLLILIV  SKFISL*HHRQYFLRLCLA*PK LSGILTQRVFPFP WSREMS* N*L+QLIQPLRSLNQLI MQAGFKQAFQVP
Subject   1671  *KLLGSQNCSGFWWTTVLCVRLEVPIRWAFLST*KPSLIALILVASNGSSLGKGPTSNF*RTGHRPLLILIVRLSKFISL*HHRQYFLRLCLA*PKSLSGILTQRVFPFPDWSREMS*RN*LTQLIQPLRSLNQLIVMQAGFKQAFQVP  2117

Range 5: 1669 to 2079 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
259.0 bits(559) 0.0 131/137(96%) 0/137(0%) Plus/Minus
Query       39  QSTD*GSSRAELAGRASSFSSFLETNMGMETPFESESLTKTLVKLSRASGSIACDVTN**TLMTSQSRSAKDDALSFXXXXXXXXXXXXHWRPQELKQ*VRAFMCLKRPTL*ELLTSRITQSSTKNLNNFDCPVASS  449
                QSTD*GSSRAELAG ASS SSFLETN+GMETPFESESLTKTLVKLSRASGSIACDVT+**TL+TSQSRSAKDDALSFRNLRLDLCLRRNHWRPQELKQ*VRAFMCLKRPTL*ELLTSRI QSSTKNLNNFDCPVASS
Subject   1669  QSTD*GSSRAELAG*ASSSSSFLETNLGMETPFESESLTKTLVKLSRASGSIACDVTS**TLITSQSRSAKDDALSFRNLRLDLCLRRNHWRPQELKQ*VRAFMCLKRPTL*ELLTSRIAQSSTKNLNNFDCPVASS  2079

Range 6: 1669 to 2031 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
247.1 bits(533) 0.0 110/121(91%) 0/121(0%) Minus/Plus
Query       87  ARSHWAVKIVQVFGGRLCYA*GKKFL*GGPF*AHKSPHSLF*FLWPPMVSP*AKVQPQISEGQGIVLC*S*L*CHQSLSVCNITGNTS*GSA*LDQSFCQGF*LKGCFHSHIGLEK*AK*T  449
                ARS+WAVKIVQVFGGRLCYA*G KFL*GGPF*AHKSPHSL *FLWPPMV P*AKVQPQISEGQGIVLC*S*L* +QSLS CNITGNTS*GSA*LDQS CQGF*LKGCFHS IGLEK*A+ T
Subject   1669  ARSYWAVKIVQVFGGRLCYA*G*KFL*GGPF*AHKSPHSLL*FLWPPMVPP*AKVQPQISEGQGIVLC*S*L*GYQSLSACNITGNTS*GSA*LDQSLCQGF*LKGCFHSQIGLEK*ARGT  2031

Range 7: 2074 to 2115 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.9 bits(61) 0.0 13/14(93%) 0/14(0%) Minus/Plus
Query        3  *LQCRQGSSKRFKF  44
                *L CRQGSSKRFKF
Subject   2074  *L*CRQGSSKRFKF  2115

Grapevine rupestris stem pitting associated virus isolate GRSPAV 1050 02 RNA dependent RNA polymerase (RdRp) gene, partial cds; and triple gene block 1 (TGB1), triple gene block 2 (TGB2), triple gene block 3 (TGB3), coat protein (CP), and 14 kDa protein (14K) genes, complete cds

Sequence ID: JX513892.1 Length: 8716 Number of Matches: 7

Range 1: 1661 to 2107 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
330.1 bits(714) 0.0 143/149(96%) 0/149(0%) Minus/Plus
Query        2  LEATGQSKLFRFLVDDCVMREVRSSYKVGLFKHIKALTHCFNSCGLQWFLLRQRSNLKFLKDRASSFADLDCDVIKVYQFVTSQAILPEALLSLTKVFVRDSDSKGVSIPILVSRNELNELALPANSALEEPQSVDCNAGRVQASVSSS  448
                LEATGQSKLFRFLVDDCVMREVRSSYKVGLFKHIKALTHCF+SCGLQWFLLRQRSNLKFLK+RASSFADLDC+VIKVYQFVTSQAILPEALLSLTKVFVRDSDSKGVSIP LVSRNELNELA PANSALEEPQSVDCNA RVQASVSSS
Subject   1661  LEATGQSKLFRFLVDDCVMREVRSSYKVGLFKHIKALTHCFSSCGLQWFLLRQRSNLKFLKNRASSFADLDCEVIKVYQFVTSQAILPEALLSLTKVFVRDSDSKGVSIPRLVSRNELNELAHPANSALEEPQSVDCNADRVQASVSSS  2107

Range 2: 1662 to 2108 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
328.2 bits(710) 0.0 140/149(94%) 0/149(0%) Plus/Minus
Query        1  GNLKRLLEPCLHCNQLIEAPQGLN*LGELVHLAHFSRPIWEWKHPLSQNP*QKLWSS*AEPQEVLPVMLQTDKL**HHNQDQQRTMPCPSEI*GWTFA*GETIGGHKN*NNE*GLLCA*KGPPYRNFLPHA*HSRPPKT*TILTAQWLL  447
                GNLKRLLEPCLHCNQ IEAPQGLN*LGELVHLAHFSRPIWEWK PLSQNP*Q+LWSS*AEPQEVLPVMLQTDKL** HNQDQQRTMPC SEI*GWTFA*GETIGGHKN*+NE*GLLCA*KGPPYRNF PHA*HSR PKT*TILTAQ LL
Subject   1662  GNLKRLLEPCLHCNQPIEAPQGLN*LGELVHLAHFSRPIWEWKRPLSQNP*QRLWSS*AEPQEVLPVMLQTDKL**PHNQDQQRTMPCSSEI*GWTFA*GETIGGHKN*SNE*GLLCA*KGPPYRNF*PHA*HSRQPKT*TILTAQ*LL  2108

Range 3: 1661 to 2107 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
313.1 bits(677) 0.0 136/149(91%) 0/149(0%) Plus/Minus
Query        2  GT*NACLNPACIAIN*LRLLKG*ISWES*FI*LISRDQYGNGNTL*VRIPDKNFGQAKQSLRKYCL*CYKLINFDDITIKISKGRCPVLQKFEVGPLPKEKPLEATRIKTMSEGFYVLKKAHLIGTSYLTHNTVVHQKPEQF*LPSGF*  448
                GT*NACLNP CIAIN LRLLKG*ISW S*FI*LISRDQ GNGN L*VRIPDK+FGQAKQSLRKYCL*CYKLINFD++TIKISKGRCPVLQKFEVGPLPKEKPLEATR K MSEGFYVLKKAHLIGTS LTHNTVV+QKPEQF*LPS F*
Subject   1661  GT*NACLNPVCIAINRLRLLKG*ISWVS*FI*LISRDQSGNGNAL*VRIPDKDFGQAKQSLRKYCL*CYKLINFDNLTIKISKGRCPVLQKFEVGPLPKEKPLEATRTKAMSEGFYVLKKAHLIGTSNLTHNTVVNQKPEQF*LPSSF*  2107

Range 4: 1662 to 2108 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
309.4 bits(669) 0.0 136/149(91%) 0/149(0%) Minus/Plus
Query        1  *KPLGSQNCSGFWWTTVLCVR*EVPIRWAFLST*KPSLIVLILVASNGFSLGKGPTSNF*RTGHRPLLILIVMSSKFISL*HHRQYFLRLCLA*PKFLSGILTQRVFPFPYWSREMS*MN*LSQLIQPLRSLNQLIAMQAGFKQAFQVP  447
                *K LGSQNCSGFW TTVLCVR EVPIRWAFLST*KPSLI L+LVASNGFSLGKGPTSNF*RTGHRPLLILIV  SKFISL*HHRQYFLRLCLA*PK LSGILTQR FPFP WSREMS*MN*L+QLIQPLRSLN+LIAMQ GFKQAFQVP
Subject   1662  *KLLGSQNCSGFWLTTVLCVRLEVPIRWAFLST*KPSLIALVLVASNGFSLGKGPTSNF*RTGHRPLLILIVRLSKFISL*HHRQYFLRLCLA*PKSLSGILTQRAFPFPDWSREMS*MN*LTQLIQPLRSLNRLIAMQTGFKQAFQVP  2108

Range 5: 1660 to 2070 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
264.5 bits(571) 0.0 133/137(97%) 0/137(0%) Plus/Minus
Query       39  QSTD*GSSRAELAGRASSFSSFLETNMGMETPFESESLTKTLVKLSRASGSIACDVTN**TLMTSQSRSAKDDALSFXXXXXXXXXXXXHWRPQELKQ*VRAFMCLKRPTL*ELLTSRITQSSTKNLNNFDCPVASS  449
                QSTD*GSSRAELAG ASSFSSFLETN+GMETPFESESLTKTLVKLSRASGSIACDVTN**TL+TSQSRSAKDDAL FRNLRLDLCLRRNHWRPQELKQ*VRAFMCLKRPTL*ELLTSRITQSSTKNLNNFDCPVASS
Subject   1660  QSTD*GSSRAELAG*ASSFSSFLETNLGMETPFESESLTKTLVKLSRASGSIACDVTN**TLITSQSRSAKDDALFFRNLRLDLCLRRNHWRPQELKQ*VRAFMCLKRPTL*ELLTSRITQSSTKNLNNFDCPVASS  2070

Range 6: 1660 to 2022 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
241.2 bits(520) 0.0 111/121(92%) 0/121(0%) Minus/Plus
Query       87  ARSHWAVKIVQVFGGRLCYA*GKKFL*GGPF*AHKSPHSLF*FLWPPMVSP*AKVQPQISEGQGIVLC*S*L*CHQSLSVCNITGNTS*GSA*LDQSFCQGF*LKGCFHSHIGLEK*AK*T  449
                ARS+WAVKIVQVFG RLCYA*G KFL*GGPF*AHKSPHSL *FLWPPMVSP*AKVQPQISE QGIVLC*S*L* +QSLSVCNITGNTS*GSA*LDQS CQGF*LKG FHS IGLEK*AK*T
Subject   1660  ARSYWAVKIVQVFG*RLCYA*G*KFL*GGPF*AHKSPHSLL*FLWPPMVSP*AKVQPQISEEQGIVLC*S*L*GYQSLSVCNITGNTS*GSA*LDQSLCQGF*LKGRFHSQIGLEK*AK*T  2022

Range 7: 2065 to 2106 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.0 bits(70) 0.0 14/14(100%) 0/14(0%) Minus/Plus
Query        3  *LQCRQGSSKRFKF  44
                *LQCRQGSSKRFKF
Subject   2065  *LQCRQGSSKRFKF  2106

Nucleotide Sequence (230 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 10 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
23
46
69
92
115
138
161
184
207
230

Descriptions

Alignments

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: Hiz3

Sequence ID: AB277785.1 Length: 2876 Number of Matches: 6

Range 1: 914 to 1141 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
171.1 bits(368) 0.0 72/76(95%) 0/76(0%) Minus/Plus
Query        2  SVPGSGKSSLIRELISEDENFIAFTAGVPDSRNLTGRFIKSYSAGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQ  229
                SVPGSGKSSLIRELISEDENFIAFTAGVPDS NLTGR+IK YS GCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQ
Subject    914  SVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQ  1141

Range 2: 915 to 1142 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
155.5 bits(333) 0.0 66/76(87%) 0/76(0%) Plus/Minus
Query        1  FGMGPRTAHQNLKNLGRTSTHQVYSLSLALHTLQNKT**TFL*DYGCLEHLL*KL*SFHPRKLAPLLNYFYHYQAH  228
                FGMGPR AHQNLKNLGRTSTHQVYSL LALHTL+NK * TFL*D GCLEHLL*KL*+ HPRK APLL+YFYHYQAH
Subject    915  FGMGPRIAHQNLKNLGRTSTHQVYSLYLALHTLENKA*CTFL*D*GCLEHLL*KL*NSHPRKSAPLLSYFYHYQAH  1142

Range 3: 944 to 1141 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
148.2 bits(317) 0.0 58/66(88%) 0/66(0%) Plus/Minus
Query        2  LVWVREQHIKT*KILDGQVLIKYIHFPWHCTPCRIRLNEPSCEITAVWNTCCESYEVFILGN*LPY  199
                LVWVRE HIKT*KILDGQVLIKYIHF WHCTP RIRLN PSCEI AVWNTCCESYE+ ILGN LPY
Subject    944  LVWVRE*HIKT*KILDGQVLIKYIHFTWHCTPWRIRLNVPSCEIRAVWNTCCESYEILILGNQLPY  1141

Range 4: 913 to 1140 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
135.8 bits(290) 0.0 68/76(89%) 0/76(0%) Minus/Plus
Query        3  *CAW*W*K*FNKGANFRG*KLHSFHSRCSRQP*SHRKVH*VLFCRVCSARESEYT**VLVXXXXXXX*CAVLGPIP  230
                *CAW*W*K* NKGA+FRG*+ HSFHSRCSRQP*SHRKVH* LF RVCSAR SEYT**VLVRPRFFRF*CA+LGPIP
Subject    913  *CAW*W*K*LNKGADFRG*EFHSFHSRCSRQP*SHRKVH*ALFSRVCSAR*SEYT**VLVRPRFFRF*CAILGPIP  1140

Range 5: 915 to 1142 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
135.3 bits(289) 0.0 69/76(91%) 0/76(0%) Minus/Plus
Query        1  VCLXXXXXXX*GS*FPRMKTS*LSQQVFQTAVISQEGSLSLILQGVQCQGK*IYLMSTCPSKIFQVLMCCSRTHTK  228
                VCLVVVKV **GS*FPRM+ S*LSQQVFQTA+ISQEG+LSLILQGVQCQ K*IYLMSTCPSKIFQVLMC SRTHTK
Subject    915  VCLVVVKVA**GS*FPRMRIS*LSQQVFQTALISQEGTLSLILQGVQCQVK*IYLMSTCPSKIFQVLMCYSRTHTK  1142

Range 6: 970 to 1140 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
126.2 bits(269) 0.0 52/57(91%) 0/57(0%) Plus/Minus
Query        3  WYGSENSTSKPEKSWTDKYSSSIFTFPGTAHPAE*DLMNLPVRLRLSGTPAVKAMKF  173
                WYGSENSTSKPEKSWTDKYSSSIFT PGTAHP E* LM LPVRL LSGTPAVKAMKF
Subject    970  WYGSENSTSKPEKSWTDKYSSSIFTLPGTAHPGE*GLMYLPVRLGLSGTPAVKAMKF  1140

Rupestris stem pitting associated virus 1, complete genome

Sequence ID: AF057136.1 Length: 8744 Number of Matches: 6

Range 1: 6659 to 6886 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
171.1 bits(368) 0.0 72/76(95%) 0/76(0%) Minus/Plus
Query        2  SVPGSGKSSLIRELISEDENFIAFTAGVPDSRNLTGRFIKSYSAGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQ  229
                SVPGSGKSSLIRELISEDENFIAFTAGVPDS NLTGR+IK YS GCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQ
Subject   6659  SVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQ  6886

Range 2: 6660 to 6887 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
162.4 bits(348) 0.0 69/76(91%) 0/76(0%) Plus/Minus
Query        1  FGMGPRTAHQNLKNLGRTSTHQVYSLSLALHTLQNKT**TFL*DYGCLEHLL*KL*SFHPRKLAPLLNYFYHYQAH  228
                FGMGPRTAHQNLKNLGRTSTHQVY LSLALHTL+NK * TFL*D GCLEHLL*KL*+ HPRKLAPLLNYFYHYQAH
Subject   6660  FGMGPRTAHQNLKNLGRTSTHQVY*LSLALHTLENKA*CTFL*D*GCLEHLL*KL*NSHPRKLAPLLNYFYHYQAH  6887

Range 3: 6689 to 6886 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
155.0 bits(332) 0.0 60/66(91%) 0/66(0%) Plus/Minus
Query        2  LVWVREQHIKT*KILDGQVLIKYIHFPWHCTPCRIRLNEPSCEITAVWNTCCESYEVFILGN*LPY  199
                LVWVREQHIKT*KILDGQVLIKYI+FPWHCTP RIRLN PSCEI AVWNTCCESYE+ ILGN*LPY
Subject   6689  LVWVREQHIKT*KILDGQVLIKYINFPWHCTPWRIRLNVPSCEIRAVWNTCCESYEILILGN*LPY  6886

Range 4: 6660 to 6887 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
142.2 bits(304) 0.0 71/76(93%) 0/76(0%) Minus/Plus
Query        1  VCLXXXXXXX*GS*FPRMKTS*LSQQVFQTAVISQEGSLSLILQGVQCQGK*IYLMSTCPSKIFQVLMCCSRTHTK  228
                VCLVVVKVV**GS*FPRM+ S*LSQQVFQTA+ISQEG+LSLILQGVQCQGK IYLMSTCPSKIFQVLMCCSRTHTK
Subject   6660  VCLVVVKVV**GS*FPRMRIS*LSQQVFQTALISQEGTLSLILQGVQCQGKLIYLMSTCPSKIFQVLMCCSRTHTK  6887

Range 5: 6658 to 6885 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
141.3 bits(302) 0.0 71/76(93%) 0/76(0%) Minus/Plus
Query        3  *CAW*W*K*FNKGANFRG*KLHSFHSRCSRQP*SHRKVH*VLFCRVCSARESEYT**VLVXXXXXXX*CAVLGPIP  230
                *CAW*W*K*FNKGANFRG*+ HSFHSRCSRQP*SHRKVH* LF RVCSARES YT**VLVRPRFFRF*CAVLGPIP
Subject   6658  *CAW*W*K*FNKGANFRG*EFHSFHSRCSRQP*SHRKVH*ALFSRVCSARES*YT**VLVRPRFFRF*CAVLGPIP  6885

Range 6: 6715 to 6885 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
126.2 bits(269) 0.0 52/57(91%) 0/57(0%) Plus/Minus
Query        3  WYGSENSTSKPEKSWTDKYSSSIFTFPGTAHPAE*DLMNLPVRLRLSGTPAVKAMKF  173
                WYGSENSTSKPEKSWTDKYSSSI TFPGTAHP E* LM LPVRL LSGTPAVKAMKF
Subject   6715  WYGSENSTSKPEKSWTDKYSSSILTFPGTAHPGE*GLMYLPVRLGLSGTPAVKAMKF  6885

Grapevine Rupestris stem pitting associated virus, complete genome

Sequence ID: AF026278.1 Length: 8725 Number of Matches: 6

Range 1: 6658 to 6885 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
171.1 bits(368) 0.0 72/76(95%) 0/76(0%) Minus/Plus
Query        2  SVPGSGKSSLIRELISEDENFIAFTAGVPDSRNLTGRFIKSYSAGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQ  229
                SVPGSGKSSLIRELISEDENFIAFTAGVPDS NLTGR+IK YS GCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQ
Subject   6658  SVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQ  6885

Range 2: 6659 to 6886 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
158.7 bits(340) 0.0 68/76(89%) 0/76(0%) Plus/Minus
Query        1  FGMGPRTAHQNLKNLGRTSTHQVYSLSLALHTLQNKT**TFL*DYGCLEHLL*KL*SFHPRKLAPLLNYFYHYQAH  228
                FGMGPRTAHQNLKNLGRTSTHQV SLS ALHTL+NK * TFL*D GCLEHLL*KL*+ HPRKLAPLLNYFYHYQAH
Subject   6659  FGMGPRTAHQNLKNLGRTSTHQVCSLSPALHTLENKA*CTFL*D*GCLEHLL*KL*NSHPRKLAPLLNYFYHYQAH  6886

Range 3: 6688 to 6885 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
151.4 bits(324) 0.0 59/66(89%) 0/66(0%) Plus/Minus
Query        2  LVWVREQHIKT*KILDGQVLIKYIHFPWHCTPCRIRLNEPSCEITAVWNTCCESYEVFILGN*LPY  199
                LVWVREQHIKT*KILDGQVLIKY+HFP HCTP RIRLN PSCEI AVWNTCCESYE+ ILGN*LPY
Subject   6688  LVWVREQHIKT*KILDGQVLIKYVHFPRHCTPWRIRLNVPSCEIRAVWNTCCESYEILILGN*LPY  6885

Range 4: 6659 to 6886 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
140.4 bits(300) 0.0 70/76(92%) 0/76(0%) Minus/Plus
Query        1  VCLXXXXXXX*GS*FPRMKTS*LSQQVFQTAVISQEGSLSLILQGVQCQGK*IYLMSTCPSKIFQVLMCCSRTHTK  228
                VCLVVVKVV**GS*FPRM+ S*LSQQVFQTA+ISQEG+LSLILQGVQC+GK* YLMSTCPSKIFQVLMCCSRTHTK
Subject   6659  VCLVVVKVV**GS*FPRMRIS*LSQQVFQTALISQEGTLSLILQGVQCRGK*TYLMSTCPSKIFQVLMCCSRTHTK  6886

Range 5: 6657 to 6884 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
139.9 bits(299) 0.0 70/76(92%) 0/76(0%) Minus/Plus
Query        3  *CAW*W*K*FNKGANFRG*KLHSFHSRCSRQP*SHRKVH*VLFCRVCSARESEYT**VLVXXXXXXX*CAVLGPIP  230
                *CAW*W*K*FNKGANFRG*+ HSFHSRCSRQP*SHRKVH* LF RVCSA ESE+T**VLVRPRFFRF*CAVLGPIP
Subject   6657  *CAW*W*K*FNKGANFRG*EFHSFHSRCSRQP*SHRKVH*ALFSRVCSAGESEHT**VLVRPRFFRF*CAVLGPIP  6884

Range 6: 6714 to 6884 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
127.5 bits(272) 0.0 52/57(91%) 0/57(0%) Plus/Minus
Query        3  WYGSENSTSKPEKSWTDKYSSSIFTFPGTAHPAE*DLMNLPVRLRLSGTPAVKAMKF  173
                WYGSENSTSKPEKSWTDKYSSS+FTFPGTAHP E* LM LPVRL LSGTPAVKAMKF
Subject   6714  WYGSENSTSKPEKSWTDKYSSSMFTFPGTAHPGE*GLMYLPVRLGLSGTPAVKAMKF  6884

Rupestris stem pitting associated virus 1, complete genome

Sequence ID: NC_001948.1 Length: 8744 Number of Matches: 6

Range 1: 6659 to 6886 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
171.1 bits(368) 0.0 72/76(95%) 0/76(0%) Minus/Plus
Query        2  SVPGSGKSSLIRELISEDENFIAFTAGVPDSRNLTGRFIKSYSAGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQ  229
                SVPGSGKSSLIRELISEDENFIAFTAGVPDS NLTGR+IK YS GCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQ
Subject   6659  SVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQ  6886

Range 2: 6660 to 6887 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
162.4 bits(348) 0.0 69/76(91%) 0/76(0%) Plus/Minus
Query        1  FGMGPRTAHQNLKNLGRTSTHQVYSLSLALHTLQNKT**TFL*DYGCLEHLL*KL*SFHPRKLAPLLNYFYHYQAH  228
                FGMGPRTAHQNLKNLGRTSTHQVY LSLALHTL+NK * TFL*D GCLEHLL*KL*+ HPRKLAPLLNYFYHYQAH
Subject   6660  FGMGPRTAHQNLKNLGRTSTHQVY*LSLALHTLENKA*CTFL*D*GCLEHLL*KL*NSHPRKLAPLLNYFYHYQAH  6887

Range 3: 6689 to 6886 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
155.0 bits(332) 0.0 60/66(91%) 0/66(0%) Plus/Minus
Query        2  LVWVREQHIKT*KILDGQVLIKYIHFPWHCTPCRIRLNEPSCEITAVWNTCCESYEVFILGN*LPY  199
                LVWVREQHIKT*KILDGQVLIKYI+FPWHCTP RIRLN PSCEI AVWNTCCESYE+ ILGN*LPY
Subject   6689  LVWVREQHIKT*KILDGQVLIKYINFPWHCTPWRIRLNVPSCEIRAVWNTCCESYEILILGN*LPY  6886

Range 4: 6660 to 6887 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
142.2 bits(304) 0.0 71/76(93%) 0/76(0%) Minus/Plus
Query        1  VCLXXXXXXX*GS*FPRMKTS*LSQQVFQTAVISQEGSLSLILQGVQCQGK*IYLMSTCPSKIFQVLMCCSRTHTK  228
                VCLVVVKVV**GS*FPRM+ S*LSQQVFQTA+ISQEG+LSLILQGVQCQGK IYLMSTCPSKIFQVLMCCSRTHTK
Subject   6660  VCLVVVKVV**GS*FPRMRIS*LSQQVFQTALISQEGTLSLILQGVQCQGKLIYLMSTCPSKIFQVLMCCSRTHTK  6887

Range 5: 6658 to 6885 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
141.3 bits(302) 0.0 71/76(93%) 0/76(0%) Minus/Plus
Query        3  *CAW*W*K*FNKGANFRG*KLHSFHSRCSRQP*SHRKVH*VLFCRVCSARESEYT**VLVXXXXXXX*CAVLGPIP  230
                *CAW*W*K*FNKGANFRG*+ HSFHSRCSRQP*SHRKVH* LF RVCSARES YT**VLVRPRFFRF*CAVLGPIP
Subject   6658  *CAW*W*K*FNKGANFRG*EFHSFHSRCSRQP*SHRKVH*ALFSRVCSARES*YT**VLVRPRFFRF*CAVLGPIP  6885

Range 6: 6715 to 6885 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
126.2 bits(269) 0.0 52/57(91%) 0/57(0%) Plus/Minus
Query        3  WYGSENSTSKPEKSWTDKYSSSIFTFPGTAHPAE*DLMNLPVRLRLSGTPAVKAMKF  173
                WYGSENSTSKPEKSWTDKYSSSI TFPGTAHP E* LM LPVRL LSGTPAVKAMKF
Subject   6715  WYGSENSTSKPEKSWTDKYSSSILTFPGTAHPGE*GLMYLPVRLGLSGTPAVKAMKF  6885

Grapevine rupestris stem pitting associated virus isolate GRSPAV 1050 02 RNA dependent RNA polymerase (RdRp) gene, partial cds; and triple gene block 1 (TGB1), triple gene block 2 (TGB2), triple gene block 3 (TGB3), coat protein (CP), and 14 kDa protein (14K) genes, complete cds

Sequence ID: JX513892.1 Length: 8716 Number of Matches: 6

Range 1: 6650 to 6877 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
171.1 bits(368) 0.0 72/76(95%) 0/76(0%) Minus/Plus
Query        2  SVPGSGKSSLIRELISEDENFIAFTAGVPDSRNLTGRFIKSYSAGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQ  229
                SVPGSGKSSLIRELISEDENFIAFTAGVPDS NLTGR+IK YS GCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQ
Subject   6650  SVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQ  6877

Range 2: 6651 to 6878 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
166.0 bits(356) 0.0 70/76(92%) 0/76(0%) Plus/Minus
Query        1  FGMGPRTAHQNLKNLGRTSTHQVYSLSLALHTLQNKT**TFL*DYGCLEHLL*KL*SFHPRKLAPLLNYFYHYQAH  228
                FGMGPRTAHQNLKNLGRTSTHQVYSLSLALHTL+NK * TFL*D GCLEHLL*KL*+ HPRKLAPLLNYFYHYQAH
Subject   6651  FGMGPRTAHQNLKNLGRTSTHQVYSLSLALHTLENKA*CTFL*D*GCLEHLL*KL*NSHPRKLAPLLNYFYHYQAH  6878

Range 3: 6680 to 6877 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
158.2 bits(339) 0.0 61/66(92%) 0/66(0%) Plus/Minus
Query        2  LVWVREQHIKT*KILDGQVLIKYIHFPWHCTPCRIRLNEPSCEITAVWNTCCESYEVFILGN*LPY  199
                LVWVREQHIKT*KILDGQVLIKYIHFPWHCTP RIRLN PSCEI AVWNTCCESYE+ ILGN*LPY
Subject   6680  LVWVREQHIKT*KILDGQVLIKYIHFPWHCTPWRIRLNVPSCEIRAVWNTCCESYEILILGN*LPY  6877

Range 4: 6649 to 6876 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
145.4 bits(311) 0.0 72/76(95%) 0/76(0%) Minus/Plus
Query        3  *CAW*W*K*FNKGANFRG*KLHSFHSRCSRQP*SHRKVH*VLFCRVCSARESEYT**VLVXXXXXXX*CAVLGPIP  230
                *CAW*W*K*FNKGANFRG*+ HSFHSRCSRQP*SHRKVH* LF RVCSARESEYT**VLVRPRFFRF*CAVLGPIP
Subject   6649  *CAW*W*K*FNKGANFRG*EFHSFHSRCSRQP*SHRKVH*ALFSRVCSARESEYT**VLVRPRFFRF*CAVLGPIP  6876

Range 5: 6651 to 6878 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.5 bits(309) 0.0 72/76(95%) 0/76(0%) Minus/Plus
Query        1  VCLXXXXXXX*GS*FPRMKTS*LSQQVFQTAVISQEGSLSLILQGVQCQGK*IYLMSTCPSKIFQVLMCCSRTHTK  228
                VCLVVVKVV**GS*FPRM+ S*LSQQVFQTA+ISQEG+LSLILQGVQCQGK*IYLMSTCPSKIFQVLMCCSRTHTK
Subject   6651  VCLVVVKVV**GS*FPRMRIS*LSQQVFQTALISQEGTLSLILQGVQCQGK*IYLMSTCPSKIFQVLMCCSRTHTK  6878

Range 6: 6706 to 6876 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.9 bits(275) 0.0 53/57(93%) 0/57(0%) Plus/Minus
Query        3  WYGSENSTSKPEKSWTDKYSSSIFTFPGTAHPAE*DLMNLPVRLRLSGTPAVKAMKF  173
                WYGSENSTSKPEKSWTDKYSSSIFTFPGTAHP E* LM LPVRL LSGTPAVKAMKF
Subject   6706  WYGSENSTSKPEKSWTDKYSSSIFTFPGTAHPGE*GLMYLPVRLGLSGTPAVKAMKF  6876