Queries
Nucleotide Sequence (512 letters)
Query ID: | ds2016-57_42 |
Query definition: | No definition line |
Query length: | 352 |
Program: | TBLASTX 2.2.29+ |
Database: | /save/stheil/db/refseq_vir/viral.genomic.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
307.2 | 918.8 | 34% | 7.099e-83 | 42% | NC_033277 | |
273.7 | 560.2 | 29% | 8.326e-73 | 32% | NC_007539 | |
166.9 | 280.9 | 25% | 1.146e-40 | 39% | NC_005978 | |
133.0 | 260.9 | 27% | 1.092e-35 | 41% | NC_009947 | |
61.1 | 92.4 | 16% | 1.37e-12 | 39% | NC_028495 |
Alignments
Isaria javanica chrysovirus 1 isolate IjCV-1 RNA-dependent RNA polymerase (RdRp) gene, complete cds
Range 1: 2155 to 2619 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
307.2 bits(664) | 0.0 | 121/155(78%) | 0/155(0%) | Plus/Plus |
Query 1 VLYDWADFNEQHSAWEMAQVIKELENVMPDTPDYSMFCSAIIEGMFRMGLEDREGMVHKLWRGLYSGWRGTTWINTVLNFVYVAIALMNLERITGKSVVLMVDHGGDDLDLCLSQPEMMPQFMEIMDNMLFKANKWKQMFGIRSKFFRNTISGAR 465 VLYDWADFNEQHSA EMA VI++L MP PDY MFC A++ GM+ MGLEDREG+VHK+W GLYSGWRGTTWIN+ LNF YV IAL NL RITG VVLMVDHGGDDLDL LSQP++MP F+EIMDNMLFKANKWKQMFG+RS+FFRNTISGAR Subject 2155 VLYDWADFNEQHSADEMAGVIRKLSETMPAGPDYPMFCEALVRGMYTMGLEDREGVVHKIWTGLYSGWRGTTWINSTLNFCYVFIALENLRRITGSEVVLMVDHGGDDLDLMLSQPDVMPLFLEIMDNMLFKANKWKQMFGLRSEFFRNTISGAR 2619
Range 2: 2160 to 2612 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
208.2 bits(448) | 0.0 | 96/151(64%) | 0/151(0%) | Minus/Minus |
Query 6 PDIVFLKNFDRIPNICFHLLALNSMLSMISMNWGIISGWLRHKSRSSPPWSTISTTLFPVILSRFISAIATYTKLRTVFIHVVPRHPEYNPLQSLWTIPSLSSKPMRNIPSMMAEQNIE*SGVSGMTFSNSLITCAISHAECCSLKSAQSY 458 P+IVFLKN D PNICFHLLAL S+LS+IS N GI SG L +SRSSPPWSTI TT PVI +F A+ T K + IHVVPR PEYNP+ LWT PS SS P+ IP A QNI *SG +GM N IT AIS AECCSLKSAQSY Subject 2160 PEIVFLKNSDLNPNICFHLLALKSILSIISRNSGITSG*LSIRSRSSPPWSTIRTTSDPVIRRKFSRAMNT*QKFNVLLIHVVPRQPEYNPVHILWTTPSRSSNPIVYIPRTKASQNIG*SGPAGMVSDNLRITPAISSAECCSLKSAQSY 2612
Range 3: 2156 to 2374 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
82.6 bits(174) | 0.0 | 32/73(44%) | 0/73(0%) | Plus/Plus |
Query 2 FCMIGQISMSNTRRGKWHR*LRSWRMSCQTRPTIQCFVQPSSRVCSAWVWKTERVWSTSFGEGYTQGGEGQHG 220 +CM G ++T +W * S++ CQ T QC V+P VC+ W W+TE+V ST +G+G TQ G GQHG Subject 2156 YCMTGLTLTNSTPLTRWQG*YASYQRPCQQAQTTQCSVKPWCGVCTRWGWRTEKV*STKYGQGCTQAGGGQHG 2374
Range 4: 2490 to 2633 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.9 bits(83) | 0.0 | 20/48(42%) | 0/48(0%) | Plus/Plus |
Query 336 SQPARNDAPVHGNHG*HAI*G*QMEANVRYPVKVLQKYNIRSEGQYQP 479 ++ AR A + G++G*+A G* MEANVR V V ++++R +G +P Subject 2490 AESARRYAAIPGDYG*YAFQG**MEANVRVKV*VF*EHDLRGQGVRKP 2633
Range 5: 2158 to 2328 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
57.9 bits(120) | 0.0 | 24/57(42%) | 0/57(0%) | Minus/Minus |
Query 4 VDHTLSVFQTHAEHTLDDG*TKH*IVGRVWHDILQLLNYLCHFPRRVLLIEICPIIQ 174 VD+T SV Q H HT G T+H +V WH + L Y CH VL +++ P+IQ Subject 2158 VDYTFSVLQPHRVHTPHQGFTEHWVVWACWHGL**LAYYPCHLVSGVLFVKVSPVIQ 2328
Range 6: 2455 to 2601 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
57.4 bits(119) | 0.0 | 21/49(43%) | 0/49(0%) | Minus/Minus |
Query 301 ISEEL*PDTEHLLPFVSLK*HVIHDFHELGHHFWLAETQVQIISAMVHH 447 + ++L P EHLLPF+SL+ H+IH+ E H+ WL + +++I A+V+H Subject 2455 VPKKLRP*PEHLLPFISLEKHIIHNLQE*RHNVWLTQH*IKVIPAVVYH 2601
Range 7: 2235 to 2375 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.9 bits(107) | 0.0 | 25/47(53%) | 0/47(0%) | Plus/Plus |
Query 81 HARHARLFNVLFSHHRGYVPHGFGRQRGYGPQALERVILRVARDNMD 221 HA RL NVL S GYV G G R PQ ++RV+LR+A DNMD Subject 2235 HASRPRLPNVL*SLGAGYVHDGVGGPRRCSPQNMDRVVLRLAGDNMD 2375
Range 8: 2456 to 2563 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
36.3 bits(73) | 0.0 | 16/36(44%) | 0/36(0%) | Plus/Plus |
Query 302 WWTMAEMIWTCVSASQK*CPSSWKSWITCYLRLTNG 409 W T A M SQ C SW+ WI C+ RL NG Subject 2456 W*TTAGMTLI*C*VSQTLCRYSWRLWIICFSRLING 2563
Penicillium chrysogenum virus segment 1, complete genome
Range 1: 2125 to 2589 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
273.7 bits(591) | 0.0 | 107/155(69%) | 0/155(0%) | Plus/Plus |
Query 1 VLYDWADFNEQHSAWEMAQVIKELENVMPDTPDYSMFCSAIIEGMFRMGLEDREGMVHKLWRGLYSGWRGTTWINTVLNFVYVAIALMNLERITGKSVVLMVDHGGDDLDLCLSQPEMMPQFMEIMDNMLFKANKWKQMFGIRSKFFRNTISGAR 465 VLYDWADFNEQHSAWEM V+ L++++ DY++F AI+ GM+ MGL DR+G VHK+WRGLYSGWRGTTWINTVLNF YV IAL N+ER+ G VVL VDHGGDD+DL LS+P +MP F+E+MD MLFKANKWKQMFG RS+FFRNTI R Subject 2125 VLYDWADFNEQHSAWEMGVVVDYLKHLIVAPRDYAVFVEAIVAGMYNMGLHDRDGNVHKIWRGLYSGWRGTTWINTVLNFCYVHIALQNVERLFGVRVVLYVDHGGDDIDLGLSEPAVMPWFLEVMDAMLFKANKWKQMFGTRSEFFRNTICDGR 2589
Range 2: 2220 to 2576 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.0 bits(308) | 0.0 | 69/119(58%) | 0/119(0%) | Minus/Minus |
Query 96 IVFLKNFDRIPNICFHLLALNSMLSMISMNWGIISGWLRHKSRSSPPWSTISTTLFPVILSRFISAIATYTKLRTVFIHVVPRHPEYNPLQSLWTIPSLSSKPMRNIPSMMAEQNIE*S 452 IVFLKN DR+PNICFHL ALN++ S+ S N GI +G L +S SSPP ST TT P S F A+ T KLRTVFIHVVPRHPE +P L T+PSLS PM IP+ MA *S Subject 2220 IVFLKNSDRVPNICFHLFALNNIASITSKNQGITAGSLSPRSMSSPP*STYKTTRTPKSRSTF*RAMCT*QKLRTVFIHVVPRHPE*SPRHIL*TLPSLSCSPMLYIPATMASTKTA*S 2576
Range 3: 2130 to 2183 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.9 bits(83) | 0.0 | 16/18(89%) | 0/18(0%) | Minus/Minus |
Query 6 TCAISHAECCSLKSAQSY 59 T ISHAECCSLKSAQSY Subject 2130 TTPISHAECCSLKSAQSY 2183
Range 4: 2344 to 2577 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
59.7 bits(124) | 0.0 | 25/78(32%) | 0/78(0%) | Minus/Minus |
Query 220 YCISEEL*PDTEHLLPFVSLK*HVIHDFHELGHHFWLAETQVQIISAMVHH*HHAFSRYSFQIHQRDRYIYKVKNCIY 453 Y I ++L P EHL P + LK H IH + HH W V +I+A+++ HA ++ F + + + Y+ +++N +Y Subject 2344 YRIPKKLRPRPEHLFPLICLKQHRIHHLQKPRHHGWFT*P*VYVITAVINVQDHAHTKEPFHVLKSNVYVTEIENGVY 2577
Range 5: 2125 to 2286 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
41.8 bits(85) | 0.0 | 18/54(33%) | 0/54(0%) | Minus/Minus |
Query 1 LSVFQTHAEHTLDDG*TKH*IVGRVWHDILQLLNYLCHFPRRVLLIEICPIIQN 162 +SV Q H HT G K ++ ++ +L+++++ H P VL +E+ PIIQ+ Subject 2125 VSVMQPHVVHTSYYGFNKDSVIAWCYN*VLEIVHHHTHLPC*VLFVEVSPIIQH 2286
Range 1: 2107 to 2562 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
166.9 bits(358) | 0.0 | 73/152(48%) | 0/152(0%) | Plus/Plus |
Query 1 VLYDWADFNEQHSAWEMAQVIKELENVMPDTPDYSMFCSAIIEGMFRMGLEDREGMVHKLWRGLYSGWRGTTWINTVLNFVYVAIALMNLERITGKSVVLMVDHGGDDLDLCLSQPEMMPQFMEIMDNMLFKANKWKQMFGIRSKFFRNTIS 456 +LYDWA+FN QHS+ E+A VI L V+ DY FC I + MF M L+ R+G + KL +GLYSGWRGTTW NTVLN Y+ +A + R+ L D GGDD+D +QPE + + ++D M F+A K KQM G S+FFR TI+ Subject 2107 LLYDWANFNVQHSSEELATVISFLGKVVQSGNDYKEFCDLIADAMFNMVLKKRDGTLVKLDKGLYSGWRGTTWDNTVLNGCYMGVAKLCFVRLYKYDCALFADQGGDDVDQEFAQPEDAYRMLAVLDRMGFEATKSKQMIGRNSEFFRVTIT 2562
Range 2: 2112 to 2336 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.0 bits(164) | 0.0 | 39/75(52%) | 0/75(0%) | Minus/Minus |
Query 6 TVFIHVVPRHPEYNPLQSLWTIPSLSSKPMRNIPSMMAEQNIE*SGVSGMTFSNSLITCAISHAECCSLKSAQSY 230 TV VVPR PEYNPL S ++PSL M NI S + QN *S TF + IT A S ECC+LK AQSY Subject 2112 TVLSQVVPRQPEYNPLSSFTSVPSLFFNTMLNIASAIRSQNSL*SFPLCTTFPKNDITVASSSLECCTLKLAQSY 2336
Amasya cherry disease associated chrysovirus segment 1, complete sequence
Range 1: 1989 to 2318 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
133.0 bits(284) | 0.0 | 54/110(49%) | 0/110(0%) | Plus/Plus |
Query 1 VLYDWADFNEQHSAWEMAQVIKELENVMPDTPDYSMFCSAIIEGMFRMGLEDREGMVHKLWRGLYSGWRGTTWINTVLNFVYVAIALMNLERITGKSVVLMVDHGGDDLD 330 +++DWA+FN HSA EM+ VI++L V+P PDY MF + M+ M L D +G VHK+ GLYSGWRGT+++N+VLN Y A M+ ERI + +DHGGDD+D Subject 1989 MMFDWANFNAFHSAEEMSLVIEKLAYVVPAPPDYDMFVKGVAASMWDMILMDPDGEVHKIETGLYSGWRGTSFLNSVLNSCYTTCARMSYERIHKYDPFVYIDHGGDDID 2318
Range 2: 2361 to 2450 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
37.3 bits(75) | 0.0 | 15/30(50%) | 0/30(0%) | Plus/Plus |
Query 373 IMDNMLFKANKWKQMFGIRSKFFRNTISGA 462 +M+ M F+A K KQM GI S+FFR T + + Subject 2361 VMEKMQFEAQKIKQMIGIDSEFFRITFTAS 2450
Range 3: 1997 to 2317 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
67.0 bits(140) | 0.0 | 44/107(41%) | 0/107(0%) | Minus/Minus |
Query 9 SRSSPPWSTISTTLFPVILSRFISAIATYTKLRTVFIHVVPRHPEYNPLQSLWTIPSLSSKPMRNIPSMMAEQNIE*SGVSGMTFSNSLITCAISHAECCSLKSAQS 329 S SSPP S + + ILS I A + T + VP HPEY P+ L T PS S K + +I + N+ *SG +G T++N IT IS AE +LK AQS Subject 1997 SISSPP*SIYTNGSYLCILS*DILAHVV*HEFNTELRNDVPLHPEYRPVSILCTSPSGSIKIISHILAATPLTNMS*SGGAGTTYANFSITKDISSAEWKALKLAQS 2317
Penicillium janczewskii chrysovirus 1 RNA 1, complete sequence
Range 1: 2296 to 2463 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
61.1 bits(127) | 0.0 | 22/56(39%) | 0/56(0%) | Plus/Plus |
Query 160 EGMVHKLWRGLYSGWRGTTWINTVLNFVYVAIALMNLERITGKSVVLMVDHGGDDL 327 +G HK GL SGWR T+W+N++LN Y+ + + ++TG V+ GGDD+ Subject 2296 DGKGHKFNHGLLSGWRCTSWVNSILNVAYMDVIAQQVHQMTGIRVLTSAQTGGDDV 2463
Nucleotide Sequence (362 letters)
Query ID: | ds2016-57_42 |
Query definition: | No definition line |
Query length: | 352 |
Program: | TBLASTX 2.2.29+ |
Database: | /save/stheil/db/refseq_vir/viral.genomic.fna |
Graphic Summary
Descriptions
Alignments
Isaria javanica chrysovirus 1 isolate IjCV-1 hypothetical protein gene, complete cds
Range 1: 757 to 939 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
77.7 bits(165) | 0.0 | 29/61(48%) | 0/61(0%) | Plus/Plus |
Query 180 NYKGVVIPMGHGKATLAREEGWIDIDSLVQPRVMSDVKEDFYDMIVSGASFDEASVVIAKE 362 ++ G+V+PMGHGK TLAREEGW+D DSL+ P+ +++ ++ Y+ I GAS A V+ E Subject 757 DFVGIVMPMGHGKTTLAREEGWVDFDSLISPKKRNELLDEVYERIAGGASIGCALSVLLPE 939
Penicillium chrysogenum virus segment 3, complete genome
Range 1: 471 to 623 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
63.6 bits(134) | 0.0 | 25/51(49%) | 0/51(0%) | Plus/Plus |
Query 189 GVVIPMGHGKATLAREEGWIDIDSLVQPRVMSDVKEDFYDMIVSGASFDEA 341 GVV+PMGHGK TLA+EEGWID DSL+ P + D + G ++ A Subject 471 GVVMPMGHGKTTLAQEEGWIDCDSLITPSTKRRLAADALRKLADGDEYENA 623
Range 2: 470 to 640 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.9 bits(107) | 0.0 | 28/57(49%) | 0/57(0%) | Minus/Minus |
Query 188 LAITTDASSKEAPDXXXXXXXXXXXXXXLGCTRESMSIHPSSLARVAFPCPIGITTP 358 L I+ A S +P S+ + LG R S SIHPSS A V FPCPIGITTP Subject 470 LLISAIAFSYSSPSASFLSASAANLRLVLGVIRLSQSIHPSS*ANVVFPCPIGITTP 640
Isaria javanica chrysovirus 1 isolate IjCV-1 RNA-dependent RNA polymerase (RdRp) gene, complete cds
Nucleotide Sequence (551 letters)
Query ID: | ds2016-57_42 |
Query definition: | No definition line |
Query length: | 352 |
Program: | TBLASTX 2.2.29+ |
Database: | /save/stheil/db/refseq_vir/viral.genomic.fna |
Graphic Summary
Descriptions
Alignments
Penicillium chrysogenum virus segment 1, complete genome
Range 1: 2677 to 3225 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
259.0 bits(559) | 0.0 | 99/183(54%) | 0/183(0%) | Minus/Plus |
Query 3 VSLLDQIGELRRRGVSNEMCQGVTMSCMSEWCKVKDGEEWMKLREAVLHGVEEQGGLGVPDSANQVWILDKAVPEVNEEWYKIVVPDYKASKDYVKVLSDEMARFSIVIERQEDLAKKLAIDSYDLEKSVDRMAWKKLLNFDGKPIAFRNVIEPMVNDDLMSSFIDFQIDEQMTRKFDKASLY 551 VSLLDQI +LRRRG S E+CQG+T++ +S WC++KDGE+W+ L ++HG + GGLGVPD N W L++ VPE+NEEWYK+VVPDYKAS+DYV VL+ ++ +FS+VIE +E LA+KL+ DSYD+EKSVD WK LLNF + IA +EPM + + F++++++E +KFD AS Y Subject 2677 VSLLDQIAKLRRRGCSEELCQGLTIATISHWCRIKDGEDWLSLPAEIIHGHPDDGGLGVPDRDNNFWRLEEKVPEINEEWYKVVVPDYKASRDYVNVLARDVEKFSLVIEEREKLARKLSEDSYDIEKSVDHERWKHLLNFRTRVIAKELAVEPMEDSVVFEGFLEYEVEEGTEKKFDLASRY 3225
Range 2: 2679 to 2918 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
73.9 bits(155) | 0.0 | 40/80(50%) | 0/80(0%) | Plus/Minus |
Query 310 YHSSFTSGTALSSIHT*LAESGTPRPPCSSTPCRTASRSFIHSSPSLTLHHSDIHDIVTPWHISLLTPRRLSSPIWSSKL 549 YHSS SGT SS L+ SGTP PP S P ++ S SSPSL H + IV PWH S L PRR S I SS+L Subject 2679 YHSSLISGTFSSSRQKLLSLSGTPNPPSSGWPWMISAGSDNQSSPSLIRHQWLMVAIVRPWHSSSLHPRRRSFAI*SSRL 2918
Range 3: 2988 to 3221 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
33.6 bits(67) | 0.0 | 30/78(38%) | 0/78(0%) | Plus/Minus |
Query 7 REALSNLRVICSSI*KSIKLLIRSSFTIGSITFRKAIGLPSKFSNFFHAILSTLFSRS*ESIASFLARSSWRSMTILN 240 R+A SN + SS S K + +IGS AI KF+ FH ST FS S ES S A S S+T N Subject 2988 RDAKSNFFSVPSSTSYSKKPSNTTLSSIGSTANSLAITRVLKFNRCFHRS*STDFSMSYESSDSLRASFSRSSITSEN 3221
Range 4: 2680 to 3225 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
77.1 bits(162) | 0.0 | 50/182(27%) | 0/182(0%) | Plus/Minus |
Query 3 VQRGFVKFACHLFINLKINKTAH*VIIHHRLDHVSEGYWLTVEIQ*LLPCHSVHAFFKVIGINCQLLSQILLAFNDNTESRHLIRQHLDIVLACLVIRNYNFVPFFIYLRNSFVKYPHLIGRIRHTKTSLLFHAMQDCLTQLHPFLAIFNLTPLRHTRHSHTLAHLIANPAPP*LSNLV*QA 548 + R +K + + KT I HRL+ G EIQ +LP ++ F VI I QL +L E H+ ++D++ V+R+++ +PF I R+ + P ++ +RH + ++++ A+ D Q P I N P+ + LA L+ AP L L+*QA Subject 2680 ITRRQIKLLLRPLFDFILQKTLKYDAILHRLNSQLLGDHTGSEIQQVLPPFMIN*FLDVIRILRQLAC*LLSFLYHK*ELFHVPG*YIDVIATRFVVRHHHLIPFLIDFRHLLFEPPEVVVSVRHPQPAVVWVAVDDLSRQR*PIFPILNPAPVADGSNRQALAQLLTASAPSQLCYLI*QA 3225
Isaria javanica chrysovirus 1 isolate IjCV-1 RNA-dependent RNA polymerase (RdRp) gene, complete cds
Range 1: 2710 to 3255 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
275.5 bits(595) | 0.0 | 108/182(59%) | 0/182(0%) | Minus/Plus |
Query 3 SLLDQIGELRRRGVSNEMCQGVTMSCMSEWCKVKDGEEWMKLREAVLHGVEEQGGLGVPDSANQVWILDKAVPEVNEEWYKIVVPDYKASKDYVKVLSDEMARFSIVIERQEDLAKKLAIDSYDLEKSVDRMAWKKLLNFDGKPIAFRNVIEPMVNDDLMSSFIDFQIDEQMTRKFDKASLY 548 SLLDQIG+LRRRGV+ MCQG MS +S WCKVK+GEEW+ L + VLHG EEQ GLG+PD N+VWIL+K VP++ E WYK+VVPD KAS+DYV+VLS ++ +FS+V+ERQE+LA+KLA DSYD+EK++DR+ W++LL+FD K + R VIE M + + SF++F+ DE M KF+KA+ + Subject 2710 SLLDQIGKLRRRGVAEAMCQGFAMSTISHWCKVKEGEEWLDLPDVVLHGCEEQNGLGIPDRNNEVWILEKPVPQLEEGWYKVVVPDCKASRDYVRVLSRDVEQFSLVLERQEELARKLAEDSYDIEKTLDRVQWRELLSFDCKVLGKRPVIEVMEDQAVFESFLEFEPDEDMATKFNKAARF 3255
Range 2: 2710 to 3240 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
134.9 bits(288) | 0.0 | 65/177(37%) | 0/177(0%) | Plus/Minus |
Query 18 VKFACHLFINLKINKTAH*VIIHHRLDHVSEGYWLTVEIQ*LLPCHSVHAFFKVIGINCQLLSQILLAFNDNTESRHLIRQHLDIVLACLVIRNYNFVPFFIYLRNSFVKYPHLIGRIRHTKTSLLFHAMQDCLTQLHPFLAIFNLTPLRHTRHSHTLAHLIANPAPP*LSNLV*QA 548 VKF CH+ + L++ + +I H L H T+E Q L P S+ F ++ I QL Q+ LAF + TE H+ + +I+ CL IRN+N VP F LRN F++YP LI I +T L +M+ + + P LA +L P+ H +LAH +++P P L NL+ QA Subject 2710 VKFRCHVLVRLELEEAFENCLILHNLYHRPLPQHFTIEAQQLTPLDSIQCFLYIVRIFSQLAGQLFLAF*NETELFHISG*NPNIIPTCLAIRNHNLVPPFFELRNWFLEYPDLIVSIGYT*AILFLASMKHNIR*IQPLLAFLDLAPMTDRAHCESLAHSLSHPTSPQLPNLIEQA 3240
Range 3: 2709 to 2948 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
87.7 bits(185) | 0.0 | 44/80(55%) | 0/80(0%) | Plus/Minus |
Query 310 YHSSFTSGTALSSIHT*LAESGTPRPPCSSTPCRTASRSFIHSSPSLTLHHSDIHDIVTPWHISLLTPRRLSSPIWSSKL 549 YH S + GT SSI T L SG PRP CSS P T S HSSPSLTLH I I PWHI+ TPR + PI SS+L Subject 2709 YHPSSSCGTGFSSIQTSLFLSGIPRPFCSSHP*STTSGKSSHSSPSLTLHQ*LIVLIANPWHIASATPRLRNFPI*SSRL 2948
Range 4: 3018 to 3245 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.8 bits(111) | 0.0 | 37/76(49%) | 0/76(0%) | Plus/Minus |
Query 13 ALSNLRVICSSI*KSIKLLIRSSFTIGSITFRKAIGLPSKFSNFFHAILSTLFSRS*ESIASFLARSSWRSMTILN 240 AL N + SS S KL + +I SIT R L SK SN H LS +FS S ES AS A SSWRS T LN Subject 3018 ALLNFVAMSSSGSNSRKLSKTA*SSITSITGRFPSTLQSKLSNSRHWTLSNVFSISYESSASLRANSSWRSKTRLN 3245
Range 5: 2798 to 3136 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
58.3 bits(121) | 0.0 | 39/113(35%) | 0/113(0%) | Minus/Plus |
Query 122 GVRLKMARNG*SCVRQSCMAWKSKEVLVCLIRPIKCGYLTKLFLR*MKNGTKL*FRITRQARTMSRCCLMRWRDSVLSLNAKRIWLRSWQLIPMTLKKAWTEWHGRSY*ISTV 460 G R + AR+G + M +++ V I ++ GY F K GT+L FRI RQ M W SV NAK+ W SW I +K W E G S * S V Subject 2798 GARSRKARSGWIYLMLCFMDARNRMA*VYPIETMRSGYSRNQFRSSKKGGTRLWFRIARQVGIMLGFYPEMWNSSVSF*NAKKSWPASWLKIRTI*RKHWIESSGVSC*ASIV 3136
Range 6: 2906 to 3136 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
55.1 bits(114) | 0.0 | 32/77(42%) | 0/77(0%) | Plus/Minus |
Query 122 YRRNSVTSSMPFCPRFFQGHRNQLPAS*PDPLGVQ*QY*ISPSHQTAP*HSPCLPCNPELQFCTILHLPQEQLCQVS 352 Y R+S T + P F N PA P LGV + * P P*H+P LPCNPE Q CT L E + +VS Subject 2906 YNRSSATHATGLYPMFSLYRTNLQPACGPTLLGVLKRD*TVPHLWIEP*HNPDLPCNPEPQPCTTLLRAAELVSRVS 3136
Range 7: 2895 to 3065 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.9 bits(107) | 0.0 | 26/57(46%) | 0/57(0%) | Minus/Plus |
Query 193 QSSVDT*QSCS*GK*RMVQNCSSGLQGKQGLCQGAV**DGEIQYCH*TPRGSG*EAG 363 Q +DT ++ S + R+VQ C SGLQGK GLC G++ G +Q TPR G +AG Subject 2895 Q*GLDTRETSSAARRRVVQGCGSGLQGKSGLC*GSIQRCGTVQSRFRTPRRVGPQAG 3065
Range 1: 2659 to 2883 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
77.6 bits(163) | 0.0 | 29/75(39%) | 0/75(0%) | Minus/Plus |
Query 327 VSLLDQIGELRRRGVSNEMCQGVTMSCMSEWCKVKDGEEWMKLREAVLHGVEEQGGLGVPDSANQVWILDKAVPE 551 VSL+D +L RRGV +T ++ W K++ +WMK + V+HG EE GG+G+PD VWI++ +P+ Subject 2659 VSLVDMAWKLIRRGVDAAFMITLTEVAITHWAKIRKDLDWMKTPQEVIHGAEECGGMGIPDKDGMVWIVEPPIPD 2883
Amasya cherry disease associated chrysovirus segment 1, complete sequence
Range 1: 2547 to 2759 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
75.3 bits(158) | 0.0 | 29/71(41%) | 0/71(0%) | Minus/Plus |
Query 333 LLDQIGELRRRGVSNEMCQGVTMSCMSEWCKVKDGEEWMKLREAVLHGVEEQGGLGVPDSANQVWILDKAV 545 L+DQ+ ++ RRG E+ + ++ W +VK ++W+ L +HG EEQGGLGVPD VW LDK + Subject 2547 LMDQMAKICRRGFHQEVGHTLLSLAIAHWGRVKPDKDWLALPAVAIHGCEEQGGLGVPDKDGCVWWLDKEI 2759
Nucleotide Sequence (306 letters)
Query ID: | ds2016-57_42 |
Query definition: | No definition line |
Query length: | 352 |
Program: | TBLASTX 2.2.29+ |
Database: | /save/stheil/db/refseq_vir/viral.genomic.fna |
Graphic Summary
Descriptions
Alignments
Penicillium chrysogenum virus segment 2, complete genome
Range 1: 761 to 928 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.5 bits(106) | 0.0 | 26/56(46%) | 0/56(0%) | Minus/Plus |
Query 86 LTRLVKGFLMLLECMNRGSIDVVLDVQNSVVYNPRDVVNSFRHGDRSYVFNSRPPS 253 LTRLVKGFL+LLE R +D + V Y V +S+ R YVFNS+P S Subject 761 LTRLVKGFLILLEMAERKEVDFHVGNHIHVTYAIAPVCDSYDLPGRCYVFNSKPTS 928
Range 1: 849 to 1013 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
56.5 bits(117) | 0.0 | 22/55(40%) | 0/55(0%) | Minus/Plus |
Query 86 TRLVKGFLMLLECMNRGSIDVVLDVQNSVVYNPRDVVNSFRHGDRSYVFNSRPPS 250 TRLVKG L+ L+ +N G + + N + Y+ + V+ S++H DRSY++ S P S Subject 849 TRLVKGMLVYLDLLNNGKQAIKKRIPNMISYDLKSVLGSYQHRDRSYIYCSNPDS 1013
Amasya cherry disease associated chrysovirus segment 2, complete sequence
Range 1: 648 to 812 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
47.8 bits(98) | 0.0 | 21/55(38%) | 0/55(0%) | Minus/Plus |
Query 86 TRLVKGFLMLLECMNRGSIDVVLDVQNSVVYNPRDVVNSFRHGDRSYVFNSRPPS 250 TRLVKG L+ ++ M G V +++N + Y P V+ S+R RSY ++S+ S Subject 648 TRLVKGCLIYMDLMYGGDARVSTELKNLIEYEPEPVLMSYRVSGRSYAYSSQNTS 812
Isaria javanica chrysovirus 1 isolate IjCV-1 capsid protein (CP) gene, complete cds
Range 1: 738 to 899 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
86.3 bits(182) | 0.0 | 35/54(65%) | 0/54(0%) | Minus/Plus |
Query 92 LTRLVKGFLMLLECMNRGSIDVVLDVQNSVVYNPRDVVNSFRHGDRSYVFNSRP 253 LTRLVKGFLMLLECM R IDVVL VQ ++VY P++V+ SF R+YV+NS+P Subject 738 LTRLVKGFLMLLECMERRHIDVVLQVQQTIVYGPQNVIQSFLADGRAYVYNSKP 899
Nucleotide Sequence (299 letters)
Query ID: | ds2016-57_42 |
Query definition: | No definition line |
Query length: | 352 |
Program: | TBLASTX 2.2.29+ |
Database: | /save/stheil/db/refseq_vir/viral.genomic.fna |
Graphic Summary
Descriptions
Alignments
Isaria javanica chrysovirus 1 isolate IjCV-1 RNA-dependent RNA polymerase (RdRp) gene, complete cds
Range 1: 2902 to 3198 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.5 bits(310) | 0.0 | 56/99(57%) | 0/99(0%) | Plus/Plus |
Query 1 VWVLDKPVPEGNDEWYKVVDPGYKTSKDYVKVLSEEIDKFSLAIERQDELAKKLAEDSYDIDKAIDRMEWRKLLKFDGRPMRYLDVIEPKENDAIFELF 297 VW+L+KPVP+ + WYKVV P K S+DYV+VLS ++++FSL +ERQ+ELA+KLAEDSYDI+K +DR++WR+LL FD + + VIE E+ A+FE F Subject 2902 VWILEKPVPQLEEGWYKVVVPDCKASRDYVRVLSRDVEQFSLVLERQEELARKLAEDSYDIEKTLDRVQWRELLSFDCKVLGKRPVIEVMEDQAVFESF 3198
Range 2: 2905 to 3198 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
71.2 bits(149) | 0.0 | 33/98(34%) | 0/98(0%) | Minus/Minus |
Query 4 EKLKYCVILLWLYYIEVSHRSTIELE*FPPFHSVDCFIDIIRVLGQLLRQFVLPFNRQAELVYLLG*HFNVVLAGFVTGVNHLVPFVIPLRDWFI*HP 297 E + C+IL LY+ + TIE + P S+ CF+ I+R+ QL Q L F + EL ++ G*+ N++ ++LVP LR+WF+ +P Subject 2905 EAFENCLILHNLYHRPLPQHFTIEAQQLTPLDSIQCFLYIVRIFSQLAGQLFLAF*NETELFHISG*NPNIIPTCLAIRNHNLVPPFFELRNWFLEYP 3198
Penicillium chrysogenum virus segment 1, complete genome
Range 1: 2875 to 3168 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.5 bits(275) | 0.0 | 50/98(51%) | 0/98(0%) | Plus/Plus |
Query 4 WVLDKPVPEGNDEWYKVVDPGYKTSKDYVKVLSEEIDKFSLAIERQDELAKKLAEDSYDIDKAIDRMEWRKLLKFDGRPMRYLDVIEPKENDAIFELF 297 W L++ VPE N+EWYKVV P YK S+DYV VL+ +++KFSL IE +++LA+KL+EDSYDI+K++D W+ LL F R + +EP E+ +FE F Subject 2875 WRLEEKVPEINEEWYKVVVPDYKASRDYVNVLARDVEKFSLVIEEREKLARKLSEDSYDIEKSVDHERWKHLLNFRTRVIAKELAVEPMEDSVVFEGF 3168
Nucleotide Sequence (338 letters)
Query ID: | ds2016-57_42 |
Query definition: | No definition line |
Query length: | 352 |
Program: | TBLASTX 2.2.29+ |
Database: | /save/stheil/db/refseq_vir/viral.genomic.fna |
Graphic Summary
Descriptions
Alignments
Amasya cherry disease associated chrysovirus segment 3, complete sequence
Range 1: 1193 to 1498 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
46.9 bits(96) | 0.0 | 24/102(24%) | 0/102(0%) | Plus/Plus |
Query 3 VSEVLLGGMGEVVASNLLEELGAFGDMFGSAVPSTSKHMNGFLRDYGLNHADSKNNSLLYQREVLYGKHIRWGFGLALKDYTLNLAQTLRTKGDIDIPQMQY 308 V++ ++G + ++ + ++E+LG +G + +S + +RDYGL D N+LL + + +R FG L +Y +R + +PQ+ + Subject 1193 VADAMMGEVLKMATTMVVEQLGGYGTLMIPKKAPSSFEYDSLMRDYGLGMDDPSLNALLLAWSNVRQQDVRIAFGRTLIEYFKVTTTRMRRGQEKVMPQLTF 1498
Isaria javanica chrysovirus 1 isolate IjCV-1 putative protease gene, complete cds
Range 1: 1299 to 1598 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.4 bits(215) | 0.0 | 44/100(44%) | 0/100(0%) | Plus/Plus |
Query 3 VSEVLLGGMGEVVASNLLEELGAFGDMFGSAVPSTSKHMNGFLRDYGLNHADSKNNSLLYQREVLYGKHIRWGFGLALKDYTLNLAQTLRTKGDIDIPQM 302 VS++L G E VAS + E LGA G + S P TS +NG +RDYGL H ++ N LL E++ G+ I W FG+ LK+Y L LA + DI +PQ+ Subject 1299 VSDILYGDCFEAVASCVAESLGAMGRLVSSGTPRTSSTINGLMRDYGLQHTSARENILLRNWEIMAGRPICWEFGVYLKEYLLGLATNIINGFDIQMPQL 1598
Penicillium chrysogenum virus segment 4, complete genome
Range 1: 1252 to 1551 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.4 bits(167) | 0.0 | 34/100(34%) | 0/100(0%) | Plus/Plus |
Query 3 VSEVLLGGMGEVVASNLLEELGAFGDMFGSAVPSTSKHMNGFLRDYGLNHADSKNNSLLYQREVLYGKHIRWGFGLALKDYTLNLAQTLRTKGDIDIPQM 302 +S+++ G + VAS + E LGA G + S+ P T+ +NG +RDYGL H ++ +N +L E++ + +W G +K+Y L LA+ + DI++P + Subject 1252 LSDLMYGMTFKAVASCVAETLGAMGTIVSSSTPRTNPTINGLMRDYGLQHTNAWDNFMLRNFEMVTRRPTQWDIGQHMKEYALALAEHVMLGYDIEMPSI 1551
Range 1: 1401 to 1577 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
42.8 bits(87) | 0.0 | 17/59(29%) | 0/59(0%) | Plus/Plus |
Query 3 VSEVLLGGMGEVVASNLLEELGAFGDMFGSAVPSTSKHMNGFLRDYGLNHADSKNNSLL 179 +++ LLG S ++E+LG +G++ P+T LR+YG+ + N+LL Subject 1401 IADALLGHSMHASTSCMIEKLGGYGELMCQGNPATDSMYQSILREYGITTMSIETNALL 1577
Nucleotide Sequence (362 letters)
Query ID: | ds2016-57_42 |
Query definition: | No definition line |
Query length: | 352 |
Program: | TBLASTX 2.2.29+ |
Database: | /save/stheil/db/refseq_vir/viral.genomic.fna |
Graphic Summary
Descriptions
Alignments
Isaria javanica chrysovirus 1 isolate IjCV-1 capsid protein (CP) gene, complete cds
Range 1: 1539 to 1820 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
108.3 bits(230) | 0.0 | 38/94(40%) | 0/94(0%) | Plus/Plus |
Query 6 GLWLCDENRRSVDNGILAALTNGVSDLSGRITSFDVVQREMNLGKIVYKPRDIPQGAFTIRWVCASKTEPRFVPRDRRRITKHVSLVQECDATP 287 GLWLC E +++V NG++ +L GVSD+S T++DV++RE+ L + ++ RD+P+G FT+ WV ++ + + R+R K + LV+ECD P Subject 1539 GLWLCQEAKKTVANGVIESLVRGVSDMSQETTTYDVLKRELRLANVAFRERDLPRGEFTVGWVSVTRLDSFKTIKPRKRTVKPIELVRECDFNP 1820
Penicillium chrysogenum virus segment 2, complete genome
Range 1: 1559 to 1759 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
58.8 bits(122) | 0.0 | 26/67(39%) | 0/67(0%) | Plus/Plus |
Query 6 GLWLCDENRRSVDNGILAALTNGVSDLSGRITSFDVVQREMNLGKIVYKPRDIPQGAFTIRWVCASK 206 GLWL + DNG ++ L NG LS +DV+ E+ L I + +P GAFT RWV A + Subject 1559 GLWLVQDASVCTDNGPISFLVNGEKLLSADRAGYDVLVEELTLANIRIEHHKMPTGAFTTRWVAAKR 1759
Amasya cherry disease associated chrysovirus segment 2, complete sequence
Range 1: 1458 to 1634 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.3 bits(99) | 0.0 | 19/59(32%) | 0/59(0%) | Plus/Plus |
Query 9 LWLCDENRRSVDNGILAALTNGVSDLSGRITSFDVVQREMNLGKIVYKPRDIPQGAFTI 185 LWLC++ + NG + + N D + ++++ E+ G+I+Y R IP G FTI Subject 1458 LWLCEDGTLCMKNGGIIMMKNAKKDGRAQNPYLEILKDEIKKGRIIYDTRRIPDGDFTI 1634
Range 1: 1662 to 1835 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.3 bits(99) | 0.0 | 21/58(36%) | 0/58(0%) | Plus/Plus |
Query 12 WLCDENRRSVDNGILAALTNGVSDLSGRITSFDVVQREMNLGKIVYKPRDIPQGAFTI 185 WLCD SV NG + A GVSD+ D++++E+ +V+ +P+G FTI Subject 1662 WLCDGGVASVRNGGVMAFKKGVSDMMTDNPYHDILRKELAKSNVVFDFSKLPKGNFTI 1835
Nucleotide Sequence (355 letters)
Query ID: | ds2016-57_42 |
Query definition: | No definition line |
Query length: | 352 |
Program: | TBLASTX 2.2.29+ |
Database: | /save/stheil/db/refseq_vir/viral.genomic.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
49.2 | 49.2 | 21% | 1.865e-05 | 31% | NC_033318 |
Alignments
Isaria javanica chrysovirus 1 isolate IjCV-1 hypothetical protein gene, complete cds
Range 1: 1171 to 1395 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
49.2 bits(101) | 0.0 | 23/75(31%) | 0/75(0%) | Plus/Plus |
Query 36 EDIDDVRWYVYCMCESAGIKVAKPDLYGVEQDCIHSCQFKTGEAVDMERSVVAFVRGMIP*DVVNYQVQLIGLIS 260 E ++ R Y +C + GI V++P +G+ + T +D+E V + +G +P + V+YQV L GL S Subject 1171 ESYEETRMLAYRICIAFGITVSRPSDFGLTDPLMSQGPGLTSTKMDLEDMVTYYDKGKVPRESVDYQVHLSGLQS 1395
Nucleotide Sequence (377 letters)
Query ID: | ds2016-57_42 |
Query definition: | No definition line |
Query length: | 352 |
Program: | TBLASTX 2.2.29+ |
Database: | /save/stheil/db/refseq_vir/viral.genomic.fna |
Graphic Summary
Descriptions
Alignments
Isaria javanica chrysovirus 1 isolate IjCV-1 hypothetical protein gene, complete cds
Range 1: 2410 to 2784 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
100.0 bits(212) | 0.0 | 40/125(32%) | 0/125(0%) | Plus/Plus |
Query 2 PCILGLSEAEIWGRIAKRNIPRNALGMFSDRIGGAKRLVEIAEWSKSKTVMLMEMINATSWMPKITDRMLLACVLRWKEHFTAADESYMFSKLASCYTSKVLGRSYDRVKDRLADLGKVASSDGG 376 PC+ G+ E ++W I + NIPR+ALG+F + E+ EW S TV ++EM+N SW P+I + C+ RW + + S + + ++ G SY R+ RL +++S GG Subject 2410 PCVGGIEEGDLWKAIIQSNIPRHALGVFGGTVSALSLANELCEWQDSPTVAILEMVNCHSWEPRIGPGRMATCIYRWGRVCSGKVSDAVSSFMLNSHSYSRFGHSYARIASRLEFYARLSSRCGG 2784
Penicillium chrysogenum virus segment 3, complete genome
Range 1: 2109 to 2339 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
46.4 bits(95) | 0.0 | 18/77(23%) | 0/77(0%) | Plus/Plus |
Query 2 PCILGLSEAEIWGRIAKRNIPRNALGMFSDRIGGAKRLVEIAEWSKSKTVMLMEMINATSWMPKITDRMLLACVLRW 232 P +LG E + + K P+ + + E+A+WS+S +++E++NA SW+ +++ + +A + W Subject 2109 PIVLGNREEDYIIELMKLGAPKYMTSVTGSEESVLATMAELADWSRSGVGLVLELVNAGSWLGQMSPKDRIALLANW 2339
Nucleotide Sequence (329 letters)
Query ID: | ds2016-57_42 |
Query definition: | No definition line |
Query length: | 352 |
Program: | TBLASTX 2.2.29+ |
Database: | /save/stheil/db/refseq_vir/viral.genomic.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
52.8 | 92.4 | 24% | 7.156e-13 | 32% | NC_033318 |
Alignments
Isaria javanica chrysovirus 1 isolate IjCV-1 hypothetical protein gene, complete cds
Nucleotide Sequence (800 letters)
Query ID: | ds2016-57_42 |
Query definition: | No definition line |
Query length: | 352 |
Program: | TBLASTX 2.2.29+ |
Database: | /save/stheil/db/refseq_vir/viral.genomic.fna |
Graphic Summary
Descriptions
Alignments
Isaria javanica chrysovirus 1 isolate IjCV-1 putative protease gene, complete cds
Range 1: 825 to 1214 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
153.2 bits(328) | 0.0 | 61/130(47%) | 0/130(0%) | Plus/Plus |
Query 2 SDVRRLDLICENDVVVDVSGFTKEEIGLLIIGGKSYPSVWYAGDNIYTQCKMEADNVAVVSKGDFLPEESLAWGSPTRLYRLIVSLACKLGCLDDMTKVFTAMRGKCKMMADMRTYTDDNVVISDMPKSY 391 S + RL I +D+VVDV FT EE GLL + +YPSVWY GDN+YT+C M AD++ ++S + + SL+WGSP RLY + S+A KLG + + AMRGKC++MA+M + + N + S +PKSY Subject 825 SPLDRLAAISSHDIVVDVDSFTPEEAGLLALASAAYPSVWYCGDNMYTKCNMVADDLLLISSSEVQLDRSLSWGSPDRLYHTMWSVAAKLGAVQALLSSIEAMRGKCRLMANMLPHIEGNTISSMIPKSY 1214
Range 2: 1332 to 1613 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
82.6 bits(174) | 0.0 | 34/94(36%) | 0/94(0%) | Plus/Plus |
Query 515 SVANVIEETGGLGKVMCSDTIASTDKGYNGILRDYGLNHQDPRVNTVAQTWQSLSGQPILWSFGFGLKDYTLHLADEMRQDSDVLIPQLTNLIP 796 +VA+ + E+ G + S T NG++RDYGL H R N + + W+ ++G+PI W FG LK+Y L LA + D+ +PQL +P Subject 1332 AVASCVAESLGAMGRLVSSGTPRTSSTINGLMRDYGLQHTSARENILLRNWEIMAGRPICWEFGVYLKEYLLGLATNIINGFDIQMPQLLTTVP 1613
Range 3: 836 to 1096 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.0 bits(166) | 0.0 | 44/87(51%) | 0/87(0%) | Minus/Minus |
Query 13 PSLQAKLTISLYSLVGDPQANDSSGRKSPFETTATLSASILHCVYILSPAYHTEG*LLPPMISRPISSFVKPLTSTTTSFSQIRSSL 273 PSL A I YS GDPQ ND S S E + SA++LH VYILSP YHT+G SRP SS VK TSTT S + +SL Subject 836 PSLAATDHIVWYSRSGDPQLNDLSNCTSDEEISRRSSATMLHLVYILSPQYHTDGYAAEANASRPASSGVKLSTSTTIS*LLMAASL 1096
Range 1: 1149 to 1505 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
82.2 bits(173) | 0.0 | 43/119(36%) | 0/119(0%) | Plus/Plus |
Query 227 PTRLYRLIVSLACKLGCLDDMTKVFTAMRGKCKMMADMRTYTDDNVVISDMPKSYCMFRSLGERDNWRSMVVRQGGYFSTTASLIHDLVYGMMFKMSVANVIEETGGLGKVMCSDTIAS 583 P L+R IVSLACKL +DD +V + MRG+ +M ++ T D V D+ S + G R++ GY ST+ SLI D + G S + +IE+ GG G++MC A+ Subject 1149 PDSLHRTIVSLACKLDVVDDWFEVVSIMRGRPHLMREVIRRTSDRTVKMDVCLSNSHNTAFGTGGRIRAIPKNFPGYLSTSVSLIADALLGHSMHASTSCMIEKLGGYGELMCQGNPAT 1505
Range 2: 930 to 1145 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
55.1 bits(114) | 0.0 | 24/72(33%) | 0/72(0%) | Plus/Plus |
Query 5 DVRRLDLICENDVVVDVSGFTKEEIGLLIIGGKSYPSVWYAGDNIYTQCKMEADNVAVVSKGDFLPEESLAW 220 D RRL + + VVVD T +E+ LL + YPSV + DN+Y M D+V ++S + W Subject 930 DNRRLGAVMAHQVVVDADMLTNDEVELLALSAMQYPSVKFCEDNVYNTIHMMEDDVRILSSNSRSHISKIEW 1145
Amasya cherry disease associated chrysovirus segment 3, complete sequence
Range 1: 941 to 1276 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
85.8 bits(181) | 0.0 | 39/112(35%) | 0/112(0%) | Plus/Plus |
Query 227 PTRLYRLIVSLACKLGCLDDMTKVFTAMRGKCKMMADMRTYTDDNVVISDMPKSYCMFRSLGERDNWRSMVVRQGGYFSTTASLIHDLVYGMMFKMSVANVIEETGGLGKVM 562 P +YR I + CKL C+ D V MRG +MAD+ T S +PKS R+LG W+ ++ R GY +T+ ++ D + G + KM+ V+E+ GG G +M Subject 941 PETMYRAIAGICCKLDCIGDWFDVVKNMRGLPFLMADVVEKTGRTTFNSAIPKSTNYERALGGTALWKHVIRRNPGYIATSIGIVADAMMGEVLKMATTMVVEQLGGYGTLM 1276
Range 2: 743 to 949 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.9 bits(168) | 0.0 | 33/69(48%) | 0/69(0%) | Plus/Plus |
Query 26 ICENDVVVDVSGFTKEEIGLLIIGGKSYPSVWYAGDNIYTQCKMEADNVAVVSKGDFLPEESLAWGSPT 232 I + DVVVD +GF+ EE+ +L +G YPSV + DN+Y +MEAD+VAVVSK F+ E + W T Subject 743 IVDYDVVVDKAGFSNEELTMLWLGAMEYPSVKFCRDNVYNTIRMEADSVAVVSKNQFVLERHMNWDPET 949
Range 3: 1307 to 1495 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.8 bits(109) | 0.0 | 21/63(33%) | 0/63(0%) | Plus/Plus |
Query 596 YNGILRDYGLNHQDPRVNTVAQTWQSLSGQPILWSFGFGLKDYTLHLADEMRQDSDVLIPQLT 784 Y+ ++RDYGL DP +N + W ++ Q + +FG L +Y MR+ + ++PQLT Subject 1307 YDSLMRDYGLGMDDPSLNALLLAWSNVRQQDVRIAFGRTLIEYFKVTTTRMRRGQEKVMPQLT 1495
Penicillium chrysogenum virus segment 4, complete genome
Range 1: 910 to 1191 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
94.1 bits(199) | 0.0 | 38/94(40%) | 0/94(0%) | Plus/Plus |
Query 134 NIYTQCKMEADNVAVVSKGDFLPEESLAWGSPTRLYRLIVSLACKLGCLDDMTKVFTAMRGKCKMMADMRTYTDDNVVISDMPKSYCMFRSLGE 415 NIY C M AD++ VVS G + + WGSP +LY ++ ++A KL + + +MRGKCKMM+D+ TD V + +P+SYCM + G+ Subject 910 NIYNSCNMVADDLVVVSSGRLTTDSAFTWGSPDKLYNMMWTIAQKLNGVSCLMYALESMRGKCKMMSDIVAKTDCREVNAMIPRSYCMSTAFGQ 1191
Range 2: 1285 to 1566 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
64.8 bits(135) | 0.0 | 28/94(30%) | 0/94(0%) | Plus/Plus |
Query 515 SVANVIEETGGLGKVMCSDTIASTDKGYNGILRDYGLNHQDPRVNTVAQTWQSLSGQPILWSFGFGLKDYTLHLADEMRQDSDVLIPQLTNLIP 796 +VA+ + ET G + S + T+ NG++RDYGL H + N + + ++ ++ +P W G +K+Y L LA+ + D+ +P + IP Subject 1285 AVASCVAETLGAMGTIVSSSTPRTNPTINGLMRDYGLQHTNAWDNFMLRNFEMVTRRPTQWDIGQHMKEYALALAEHVMLGYDIEMPSILLTIP 1566
Range 3: 790 to 906 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.5 bits(106) | 0.0 | 19/39(49%) | 0/39(0%) | Plus/Plus |
Query 17 LDLICENDVVVDVSGFTKEEIGLLIIGGKSYPSVWYAGD 133 L + +D+V+D FT E+I LL + G+ YPSVWYAG+ Subject 790 LATVINHDMVIDGDLFTPEQISLLCLAGQQYPSVWYAGE 906
Range 4: 909 to 1226 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
64.3 bits(134) | 0.0 | 39/106(37%) | 0/106(0%) | Minus/Minus |
Query 133 PCLTTMLLQLSLSPSDLNIQ*LFGISEMTTLSSV*VLMSAIILHLPRIAVKTFVISSRHPSLQAKLTISLYSLVGDPQANDSSGRKSPFETTATLSASILHCVYIL 450 P + T + + P + +Q*L GI +T+L SV +S IILH PRI + ++ S A + I L SL GDP S P TT SA++LH +Y+L Subject 909 PGILTTICFSLICPKAVLMQ*LLGIIALTSLQSVLATISLIILHFPRILSRAYIRQLTPFSFWAIVHIML*SLSGDPHVKALSVVSLPELTTTRSSATMLHELYML 1226
Range 5: 1228 to 1308 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
24.4 bits(47) | 0.0 | 12/27(44%) | 0/27(0%) | Minus/Minus |
Query 455 LDHICN*HLEHHTVHQIMNQAGRR*EV 535 L H + LE HT+HQ+ + R*EV Subject 1228 LGHARSDGLECHTIHQVG*HSDAR*EV 1308
Nucleotide Sequence (362 letters)
Query ID: | ds2016-57_42 |
Query definition: | No definition line |
Query length: | 352 |
Program: | TBLASTX 2.2.29+ |
Database: | /save/stheil/db/refseq_vir/viral.genomic.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
91.3 | 91.3 | 25% | 3.972e-18 | 41% | NC_033317 |
Alignments
Isaria javanica chrysovirus 1 isolate IjCV-1 capsid protein (CP) gene, complete cds
Range 1: 1584 to 1856 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
91.3 bits(193) | 0.0 | 37/91(41%) | 0/91(0%) | Minus/Plus |
Query 58 VWDMMLNGVYDMSGNVTSFDVVKREMDLGKIVYKERDIPHGSFTVRWVCVTKTECSREAPPRKRVSKPMTLVHPCNKVPGSSLRSTKKKRF 330 V + ++ GV DMS T++DV+KRE+ L + ++ERD+P G FTV WV VT+ + + PRKR KP+ LV C+ P +++RF Subject 1584 VIESLVRGVSDMSQETTTYDVLKRELRLANVAFRERDLPRGEFTVGWVSVTRLDSFKTIKPRKRTVKPIELVRECDFNPRLREIGRRRERF 1856
Nucleotide Sequence (311 letters)
Query ID: | ds2016-57_42 |
Query definition: | No definition line |
Query length: | 352 |
Program: | TBLASTX 2.2.29+ |
Database: | /save/stheil/db/refseq_vir/viral.genomic.fna |
Graphic Summary
Descriptions
Alignments
Isaria javanica chrysovirus 1 isolate IjCV-1 RNA-dependent RNA polymerase (RdRp) gene, complete cds
Range 1: 1384 to 1692 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
157.8 bits(338) | 0.0 | 64/103(62%) | 0/103(0%) | Plus/Plus |
Query 2 AEMVKPWMGVNFNAWSDLMKSLHSYVRCSRFLMNTEISEQDRQALMYLDLNVGRGEYQIDEMAEVTVRSAETYSSKHLSYDSDLKLFTNEQYITDFSRGIQLA 310 AE+VKPW V+F WSD +KSLHS VRCSRFLMNTEI+E++RQ LMY+DL VGRGEY+IDEM EV R + Y +KHLSYD K +TN+QY DF + A Subject 1384 AEIVKPWFKVSFRNWSDRLKSLHSLVRCSRFLMNTEITEEERQGLMYMDLLVGRGEYKIDEMNEVRARYGDGYGTKHLSYDPVTKAYTNKQYKKDFELALDAA 1692
Range 2: 1383 to 1670 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
108.7 bits(231) | 0.0 | 54/96(56%) | 0/96(0%) | Minus/Minus |
Query 1 KSVMYCSFVKSFKSESYDKCLDE*VSALLTVTSAISSIWYSPRPTLRSRYISACLSCSLISVFIRNRLHRTYECKLFIRSDHALKFTPIHGLTISA 288 KS +YC FV + + SYD+CL S L +TS ISSI YSPRPT RS YI CLS S+ISVF+RN L RT E + F SD LK T G TISA Subject 1383 KSFLYCLFVYALVTGSYDRCLVPYPSPYLALTSFISSILYSPRPTSRSIYIKPCLSSSVISVFMRNLLQRTSEWRDFNLSDQFLKLTLNQGFTISA 1670
Range 3: 1389 to 1676 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
47.3 bits(97) | 0.0 | 29/96(30%) | 0/96(0%) | Plus/Plus |
Query 7 NGQTMDGGKFQRVV*SDEEFALVCPVQSISNEYRNQRAGQAGTDVSGP*CRARGVPDRRNGRGNSQECRNLFV*ALIVRLRLETFHK*AVHHRLQS 294 + +T+ G+FQ +V* + L + I +E+RN R G+ G DV G R+ + + RN SQ R + ++R + HK*A+ R ++ Subject 1389 DSETLVQGQFQELV*QVKVPPLTSAL*QIPHEHRNYRRGETGLDVYGSTRRSG*IQN*RNE*SQSQVWRRVRHQTSVIRSGHQGIHK*AIQKRFRT 1676
Penicillium chrysogenum virus segment 1, complete genome
Range 1: 1354 to 1662 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
150.9 bits(323) | 0.0 | 60/103(58%) | 0/103(0%) | Plus/Plus |
Query 2 AEMVKPWMGVNFNAWSDLMKSLHSYVRCSRFLMNTEISEQDRQALMYLDLNVGRGEYQIDEMAEVTVRSAETYSSKHLSYDSDLKLFTNEQYITDFSRGIQLA 310 + +V PW V WSD MK+LHS VRCS+F MNT I+E+DRQALMY+DL VGRGEY +DEMAEV +R+ +TY++KHLSYD + ++FTN+QY DF ++ A Subject 1354 SHLVFPWFKVCERDWSDKMKTLHSLVRCSKFFMNTRITEKDRQALMYMDLLVGRGEYTVDEMAEVELRTDDTYNTKHLSYDPNRQVFTNQQYKKDFITSVEEA 1662
Range 2: 1362 to 1643 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
99.6 bits(211) | 0.0 | 48/94(51%) | 0/94(0%) | Minus/Minus |
Query 10 LKSVMYCSFVKSFKSESYDKCLDE*VSALLTVTSAISSIWYSPRPTLRSRYISACLSCSLISVFIRNRLHRTYECKLFIRSDHALKFTPIHGLT 291 +KS +YC VK+ + SYD+C *VS++ + TSAISS YSPRPT +S YI AC S S+I VF++N L RT E +FI SD + T HG T Subject 1362 MKSFLYCWLVKTCRFGSYDRCFVL*VSSVRSSTSAISSTVYSPRPTSKSIYIKACRSFSVILVFMKNLLQRTSEWSVFILSDQSRSQTLNHGNT 1643
Amasya cherry disease associated chrysovirus segment 1, complete sequence
Range 1: 1260 to 1517 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
69.3 bits(145) | 0.0 | 30/86(35%) | 0/86(0%) | Plus/Plus |
Query 44 WSDLMKSLHSYVRCSRFLMNTEISEQDRQALMYLDLNVGRGEYQIDEMAEVTVRSAETYSSKHLSYDSDLKLFTNEQYITDFSRGI 301 W K +H +R SR MNTE+ +Q +Q++MY+D VGR ++ D EV R ++H++YD + + EQY DF+ + Subject 1260 WVYCQKMVHDLMRQSRHYMNTEVEQQTKQSIMYMDQLVGRRLFKPDWQKEVDDRQGNHGFAQHMAYDPNTGTWEVEQYRKDFNHAL 1517
Range 1: 1447 to 1623 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.5 bits(106) | 0.0 | 23/59(39%) | 0/59(0%) | Plus/Plus |
Query 113 SEQDRQALMYLDLNVGRGEYQIDEMAEVTVRSAETYSSKHLSYDSDLKLFTNEQYITDF 289 SE+ RQ++MYLD +GR + DE AE+ + + H+SYD ++ ++ EQY DF Subject 1447 SEEHRQSMMYLDCLLGRRIFIADEDAEIKDGTGSSGGMTHMSYDPVVRRWSVEQYRKDF 1623
Nucleotide Sequence (457 letters)
Query ID: | ds2016-57_42 |
Query definition: | No definition line |
Query length: | 352 |
Program: | TBLASTX 2.2.29+ |
Database: | /save/stheil/db/refseq_vir/viral.genomic.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
64.7 | 98.1 | 26% | 2.499e-14 | 32% | NC_033317 |
Alignments
Isaria javanica chrysovirus 1 isolate IjCV-1 capsid protein (CP) gene, complete cds
Range 1: 2460 to 2687 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
64.7 bits(136) | 0.0 | 27/76(36%) | 0/76(0%) | Plus/Plus |
Query 30 INYTGEGMVGQSQVARHINELIDKGSSRNTFGSMRRAMLKDKVSWSGSVEDAPKDGLRYIVNSPTWLRYLEGHDVD 257 INY G+ + G S +A+ +N LI+KG + + + + WSG V P ++YIVNS +W +L+G VD Subject 2460 INYKGDALPGNSTMAKEMNVLIEKGREKGEGSGLVDQARQKRRLWSGDVTALPTYAIKYIVNSESWETFLKGRGVD 2687
Nucleotide Sequence (365 letters)
Query ID: | ds2016-57_42 |
Query definition: | No definition line |
Query length: | 352 |
Program: | TBLASTX 2.2.29+ |
Database: | /save/stheil/db/refseq_vir/viral.genomic.fna |
Graphic Summary
Descriptions
Alignments
Isaria javanica chrysovirus 1 isolate IjCV-1 putative protease gene, complete cds
Range 1: 333 to 695 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
171.7 bits(372) | 0.0 | 74/121(61%) | 0/121(0%) | Minus/Plus |
Query 3 DGVEEEKKMLSKGEKEILGGLNCQVKFTRKDFAIGVNLGVAVSAEKKPFVRREKQIELDFLGSHEWALDPAKSDALYSAKESTVHLIDQEQRRTIMSKCPDLSGEDAGGIFAASVHERISV 365 DG EEEKK + GEK+I+G LNC KFT+ +NLGV VS VRREK++ +DF G EW L+PA S ALYSAKESTVHLID+EQRR IMS+CP L+G DA GI SVHERIS+ Subject 333 DGAEEEKKSIPMGEKDIIGRLNCNAKFTKSGMVDNLNLGVGVSLGLNGRVRREKKVAVDFRGGGEWHLEPAYSRALYSAKESTVHLIDEEQRRLIMSQCPTLAGSDANGIAVLSVHERISI 695
Range 2: 398 to 697 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.0 bits(214) | 0.0 | 52/100(52%) | 0/100(0%) | Plus/Minus |
Query 1 GTEILSWTLAAKIPPASSPDKSGHFDIIVRLCSWSIRWTVDSLAE*RASDLAGSNAHSCDPRKSSSICFSRLTNGFFSAETATPKFTPIAKSFLVNLT*Q 300 G +I S TL IP AS P + GH+DII R CS SIR TVDSLAE*RA + AGS HS P KS++ FS LT F ++T TP+F VNL Q Subject 398 GIDIRSCTLRTAIPLASLPARVGHWDIISRRCSSSIRCTVDSLAE*RAREYAGSRCHSPPPLKSTATFFSLLTRPFRPSDTPTPRFKLSTIPLFVNLALQ 697
Range 3: 490 to 687 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
35.4 bits(71) | 0.0 | 22/66(33%) | 0/66(0%) | Minus/Plus |
Query 11 RNKLSWTFSDHMSGRWTRPNQTPSTRPKSQQSI*LTRNRGAQ*CRNVQTCQGKMPEVSLQQVSMRG 208 R K W SG W R + STR ++Q I* +N C + Q MP V L V G Subject 490 RKKWLWILEVEESGTWNRHIRGLSTRLRNQPCI**MKNSDGLLCPSALPWQAVMPMV*LSSVYTNG 687
Penicillium chrysogenum virus segment 4, complete genome
Range 1: 283 to 642 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
125.8 bits(271) | 0.0 | 57/120(48%) | 0/120(0%) | Minus/Plus |
Query 6 DGVEEEKKMLSKGEKEILGGLNCQVKFTRKDFAIGVNLGVAVSAEKKPFVRREKQIELDFLGSHEWALDPAKSDALYSAKESTVHLIDQEQRRTIMSKCPDLSGEDAGGIFAASVHERIS 365 DG EK ++S GEKEI+ LN Q KFT F V + VS +R ELDF+G+ W L P+ + ALYS+KESTVHL+D+ QRR IMSKCP ++G + G + A++HER+S Subject 283 DGPVVEKGLISDGEKEIIRHLNVQDKFTINGFRKSVKICHMVSLGATRQTKRTGTTELDFMGAGPWTLYPSSARALYSSKESTVHLVDEAQRRMIMSKCPTMAGPTSTGTYMAAIHERLS 642
Range 2: 447 to 647 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
45.5 bits(93) | 0.0 | 26/67(39%) | 0/67(0%) | Plus/Minus |
Query 1 GTEILSWTLAAKIPPASSPDKSGHFDIIVRLCSWSIRWTVDSLAE*RASDLAGSNAHSCDPRKSSSI 201 G E S A +P P GH D+I+R + S R TVDSL E +A G P KSSS+ Subject 447 GVESRSCIAAMYVPVEVGPAIVGHLDMIIRRWASSTRCTVDSLLEYKARAELGYKVQGPAPMKSSSV 647
Nucleotide Sequence (424 letters)
Query ID: | ds2016-57_42 |
Query definition: | No definition line |
Query length: | 352 |
Program: | TBLASTX 2.2.29+ |
Database: | /save/stheil/db/refseq_vir/viral.genomic.fna |
Graphic Summary
Descriptions
Alignments
Amasya cherry disease associated chrysovirus segment 1, complete sequence
Range 1: 315 to 713 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
100.0 bits(212) | 0.0 | 47/133(35%) | 0/133(0%) | Minus/Plus |
Query 3 AGRYGVIDVDNLVSKELHNKLVEWRVEILTNGETWKDHNKEWFNEVISTLNVMVINKPTVVLVHTEETALEIGAKILGGVQYTRGGLENSIARRSHIGKHFARLNLNTVNESRTFRPKICRSPDQIEEAFLKI 401 A YG++DVD LVS + H L R +L W HN EW N V TL + N+P V+L HTEE A E+GA + + G +I R ++GK F+ L+ +V + S +Q+E A L++ Subject 315 AREYGLVDVDELVSPDEHENLYAVRKAVLMQKGDWVVHNSEWANRVRFTLMKLDYNRPVVLLCHTEEFAYEVGALPILAITMDEGVWRKNIENRGYLGKMFSELSYESVRTHTKVQMFKANSNEQVERAILRV 713
Isaria javanica chrysovirus 1 isolate IjCV-1 RNA-dependent RNA polymerase (RdRp) gene, complete cds
Range 1: 469 to 861 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
103.7 bits(220) | 0.0 | 42/131(32%) | 0/131(0%) | Minus/Plus |
Query 9 AGRYGVIDVDNLVSKELHNKLVEWRVEILTNGETWKDHNKEWFNEVISTLNVMVINKPTVVLVHTEETALEIGAKILGGVQYTRGGLENSIARRSHIGKHFARLNLNTVNESRTFRPKICRSPDQIEEAFL 401 A +YG +DVD L+++ H+ +E R I+ +TW DHN +W+ + TL+++ P ++++HTEE ALE+GA +G + + ++I +R + KHF+ L+ N S R ++ S +++ E L Subject 469 ARKYGFVDVDELITEREHDYYIEMRTGIMCGRDTWTDHNSKWYPRLNQTLDLLDYTMPVIIMLHTEELALELGAIPIGYFKLEKNVFMSNIEKRDALSKHFSILSYNESIASSKMRNQVMCSSNEMLERSL 861
Penicillium chrysogenum virus segment 1, complete genome
Range 1: 439 to 774 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
92.7 bits(196) | 0.0 | 44/112(39%) | 0/112(0%) | Minus/Plus |
Query 66 AGRYGVIDVDNLVSKELHNKLVEWRVEILTNGETWKDHNKEWFNEVISTLNVMVINKPTVVLVHTEETALEIGAKILGGVQYTRGGLENSIARRSHIGKHFARLNLNTVNES 401 A YG++DVD LVS+ H++ VE R EI+ W DHN WF + TL ++ + P V+ VHTEETALEIGA+ + + E +I+ R + F+R +L + S Subject 439 ARTYGMVDVDELVSRAEHDQYVEMRNEIVCGRGDWHDHNTLWFARLNQTLALLDYSVPVVIFVHTEETALEIGARPVACLTLETTAHEMNISGRGPKFREFSRESLRSCKPS 774
Range 1: 430 to 762 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.4 bits(191) | 0.0 | 42/111(38%) | 0/111(0%) | Minus/Plus |
Query 69 AGRYGVIDVDNLVSKELHNKLVEWRVEILTNGETWKDHNKEWFNEVISTLNVMVINKPTVVLVHTEETALEIGAKILGGVQYTRGGLENSIARRSHIGKHFARLNLNTVNE 401 A +YG IDVD V+ H L R +IL W DHN+ W ++V TL ++ ++P V+L H+EE A EIGA + V +I R+ +GK F+ LN TV + Subject 430 AKKYGFIDVDKCVTYNEHVLLYHERKKILEGERRWADHNESWNSKVRGTLEMLDYSRPVVILCHSEEMAFEIGATPMIAVLLREDAWRENIKDRTKLGKQFSELNRMTVEK 762
Nucleotide Sequence (329 letters)
Query ID: | ds2016-57_42 |
Query definition: | No definition line |
Query length: | 352 |
Program: | TBLASTX 2.2.29+ |
Database: | /save/stheil/db/refseq_vir/viral.genomic.fna |
Graphic Summary
Descriptions
Alignments
Isaria javanica chrysovirus 1 isolate IjCV-1 putative protease gene, complete cds
Range 1: 1197 to 1418 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
109.4 bits(234) | 0.0 | 48/74(65%) | 0/74(0%) | Plus/Plus |
Query 1 MVPLSYNMNTAFGSESSNTSVTKMPGYLSTSMSLVSDLLYGMTFEAAATCVGESLGAHGTLLSSKTPKTCSVIN 222 M+P SY+ A S+SSN VT MPGYL+TSMSLVSD+LYG FEA A+CV ESLGA G L+SS TP+T S IN Subject 1197 MIPKSYSQVCALNSDSSNHMVTNMPGYLATSMSLVSDILYGDCFEAVASCVAESLGAMGRLVSSGTPRTSSTIN 1418
Range 2: 1226 to 1417 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.0 bits(164) | 0.0 | 37/64(58%) | 0/64(0%) | Minus/Minus |
Query 30 LITLHVLGVFDESSVPCAPNDSPTHVAAASNVMPYNKSLTSDMLVERYPGIFVTLVLLDSLPNA 221 LI L VLGV DE++ P AP+DS T +A AS PY S T DMLV RYPG+ VT+ LL+SL +A Subject 1226 LIVLLVLGVPDETNRPMAPSDSATQLATASKQSPYRMSETRDMLVARYPGMLVTMWLLESLFSA 1417
Penicillium chrysogenum virus segment 4, complete genome
Range 1: 1150 to 1371 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
105.3 bits(225) | 0.0 | 43/74(58%) | 0/74(0%) | Plus/Plus |
Query 1 MVPLSYNMNTAFGSESSNTSVTKMPGYLSTSMSLVSDLLYGMTFEAAATCVGESLGAHGTLLSSKTPKTCSVIN 222 M+P SY M+TAFG V KMPGY STS+ ++SDL+YGMTF+A A+CV E+LGA GT++SS TP+T IN Subject 1150 MIPRSYCMSTAFGQIREKQIVVKMPGYFSTSIGMLSDLMYGMTFKAVASCVAETLGAMGTIVSSSTPRTNPTIN 1371
Range 2: 1155 to 1355 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
62.9 bits(131) | 0.0 | 33/67(49%) | 0/67(0%) | Minus/Minus |
Query 6 VLGVFDESSVPCAPNDSPTHVAAASNVMPYNKSLTSDMLVERYPGIFVTLVLLDSLPNAVFIL*LRG 206 V GV DE+ VP AP S TH A A NV+PY +S MLVE+ PGI T+ P AV + *L G Subject 1155 VRGVDDETIVPIAPRVSATHEATALNVIPYIRSDNIPMLVEK*PGILTTICFSLICPKAVLMQ*LLG 1355
Amasya cherry disease associated chrysovirus segment 3, complete sequence
Nucleotide Sequence (345 letters)
Query ID: | ds2016-57_42 |
Query definition: | No definition line |
Query length: | 352 |
Program: | TBLASTX 2.2.29+ |
Database: | /save/stheil/db/refseq_vir/viral.genomic.fna |
Graphic Summary
Descriptions
Alignments
Isaria javanica chrysovirus 1 isolate IjCV-1 putative protease gene, complete cds
Range 1: 1047 to 1244 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
74.4 bits(156) | 0.0 | 31/66(47%) | 0/66(0%) | Plus/Plus |
Query 2 SPTALYHMICSIACKFGAVGDLATVLRDMRGRCKMMADMLPHVTSNVVVSNMPLSYSMDLALGIKS 199 SP LYH + S+A K GAV L + + MRG+C++MA+MLPH+ N + S +P SYS AL S Subject 1047 SPDRLYHTMWSVAAKLGAVQALLSSIEAMRGKCRLMANMLPHIEGNTISSMIPKSYSQVCALNSDS 1244
Range 2: 1260 to 1382 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.3 bits(110) | 0.0 | 21/41(51%) | 0/41(0%) | Plus/Plus |
Query 218 TKTGNYFATSQSLIHDLLVGMCFEASATTVVEDLGALGKMI 340 T Y ATS SL+ D+L G CFEA A+ V E LGA+G+++ Subject 1260 TNMPGYLATSMSLVSDILYGDCFEAVASCVAESLGAMGRLV 1382
Range 3: 1049 to 1231 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.5 bits(106) | 0.0 | 25/61(41%) | 0/61(0%) | Minus/Minus |
Query 4 SARSIE*LSGMFETTTFDVTCGSMSAIILHLPLMSRKTVARSPTAPNLHAMEHIMWYNAVG 186 SA + E*L G+ E CGS+ AI HLP ++ + TAP+L A +HI+WY+ G Subject 1049 SAHTWE*LFGIIELIVLPSMCGSILAIRRHLPRIASIEDNSACTAPSLAATDHIVWYSRSG 1231
Penicillium chrysogenum virus segment 4, complete genome
Range 1: 1000 to 1188 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
56.5 bits(117) | 0.0 | 26/63(41%) | 0/63(0%) | Plus/Plus |
Query 2 SPTALYHMICSIACKFGAVGDLATVLRDMRGRCKMMADMLPHVTSNVVVSNMPLSYSMDLALG 190 SP LY+M+ +IA K V L L MRG+CKMM+D++ V + +P SY M A G Subject 1000 SPDKLYNMMWTIAQKLNGVSCLMYALESMRGKCKMMSDIVAKTDCREVNAMIPRSYCMSTAFG 1188
Amasya cherry disease associated chrysovirus segment 3, complete sequence
Range 1: 941 to 1126 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
46.4 bits(95) | 0.0 | 21/62(34%) | 0/62(0%) | Plus/Plus |
Query 5 PTALYHMICSIACKFGAVGDLATVLRDMRGRCKMMADMLPHVTSNVVVSNMPLSYSMDLALG 190 P +Y I I CK +GD V+++MRG +MAD++ S +P S + + ALG Subject 941 PETMYRAIAGICCKLDCIGDWFDVVKNMRGLPFLMADVVEKTGRTTFNSAIPKSTNYERALG 1126
Nucleotide Sequence (301 letters)
Query ID: | ds2016-57_42 |
Query definition: | No definition line |
Query length: | 352 |
Program: | TBLASTX 2.2.29+ |
Database: | /save/stheil/db/refseq_vir/viral.genomic.fna |
Graphic Summary
Descriptions
Alignments
Isaria javanica chrysovirus 1 isolate IjCV-1 capsid protein (CP) gene, complete cds
Range 1: 2817 to 3080 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
76.2 bits(160) | 0.0 | 35/88(40%) | 0/88(0%) | Minus/Plus |
Query 34 GASSSRFPMAIRRDELVGAGDPVTLPYRHAPASFGQREIPEDDGQWIMLAIRVQRPIYTPGDLIPLTSAFTLSREQIAVLRERYGLFE 297 GA + RFP + R +L G+P+ L YR P+S G R+ + D +W++LA RV R ++ L L S F + A LRE YGLF+ Subject 2817 GAYNDRFPSVLNRHDLDAIGEPMVLEYRKNPSSVGPRDPDDSDSRWLVLASRVNRKVFDFDYLRMLCSNFIVPAGMRANLREVYGLFD 3080
Penicillium chrysogenum virus segment 2, complete genome
Range 1: 2891 to 3091 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.8 bits(109) | 0.0 | 23/67(34%) | 0/67(0%) | Minus/Plus |
Query 28 TLPYRHAPASFGQREIPEDDGQWIMLAIRVQRPIYTPGDLIPLTSAFTLSREQIAVLRERYGLFEGR 228 TL +R+AP+S G R ++D +W+++A + G L L F++ +E LR +YGLF G+ Subject 2891 TLAWRNAPSSLGVRPFAQEDSRWLVMAATCGGGSFGIGKLKSLCKEFSVPKELRDALRVKYGLFGGK 3091