Queries
Nucleotide Sequence (408 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
256.5 | 256.5 | 30% | 8.542e-83 | 100% | AID16020 |
Alignments
coat protein [Grapevine rupestris stem pitting-associated virus]
Sequence ID: gb|AID16020.1| Length: 259 Number of Matches: 1
Range 1: 138 to 259 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
256.5 bits(654) | 0.0 | 122/122(100%) | 0/122(0%) | Plus/Plus |
Query 12 GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE 377 GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE Subject 138 GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE 259
Nucleotide Sequence (955 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
655.2 | 655.2 | 33% | 0 | 99% | AQN80527 |
Alignments
replicase [Grapevine rupestris stem pitting-associated virus]
Sequence ID: gb|AQN80527.1| Length: 2161 Number of Matches: 1
Range 1: 1002 to 1318 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
655.2 bits(1689) | 0.0 | 314/317(99%) | 0/317(0%) | Minus/Plus |
Query 3 GSFEVFKGDFNIKKMEEGSIFVITYKAPVRSTGKLRVHKTECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLGTDGLALKAGIRSFVESECLVSPNLSAPTIHKQLGENVYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCKPSTYHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGSGPQSIKVDELRKVKRSALDFLSMNGSKITYFPNFERAEKLQGSL 953 GSFEVFKGDFNIKKMEEGSIFVITYKAPVRSTGKLRVHKTECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLL TDGLALKAGIRSFVESECLVSPNLSAPTIHKQLGENVYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCKPST HIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGSGPQSIKVDELRKVKRSALDFLSMNGSKITYFPNFERAEKLQG L Subject 1002 GSFEVFKGDFNIKKMEEGSIFVITYKAPVRSTGKLRVHKTECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESECLVSPNLSAPTIHKQLGENVYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCKPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGSGPQSIKVDELRKVKRSALDFLSMNGSKITYFPNFERAEKLQGCL 1318
Nucleotide Sequence (384 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
181.0 | 181.0 | 31% | 4.691e-49 | 76% | AAR31772 |
Alignments
RNA-dependent RNA polymerase [Grapevine rupestris stem pitting-associated virus]
Sequence ID: gb|AAR31772.1| Length: 2161 Number of Matches: 1
Range 1: 581 to 700 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
181.0 bits(458) | 0.0 | 91/120(76%) | 0/120(0%) | Plus/Plus |
Query 24 GFQWSLLKQRVNLKFLKGSETSFVELSSEVARLYKSVVLQALSPSASSGLAKVYVDHSSSQLCSDSHFTSDDELSNPALANDLTFEELLPGDFQGSQTAEQIACAHPTNDALRIDLAPPS 383 G QW LLKQR+NLKFLKGSETSFVELS VA+LYKSV+LQ SP+A SGLA+VYVDHSSSQLCS SHF SDDEL NPALA+++T E L D QG QT EQ ACAHP NDAL IDLAPPS Subject 581 GLQWFLLKQRINLKFLKGSETSFVELSCGVAKLYKSVILQVSSPNALSGLARVYVDHSSSQLCSGSHFMSDDELPNPALADNITSEASLSEDCQGFQTVEQAACAHPINDALCIDLAPPS 700
Nucleotide Sequence (357 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
248.1 | 248.1 | 33% | 1.619e-72 | 99% | AQN80517 |
Alignments
replicase [Grapevine rupestris stem pitting-associated virus]
Sequence ID: gb|AQN80517.1| Length: 2161 Number of Matches: 1
Range 1: 139 to 256 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
248.1 bits(632) | 0.0 | 117/118(99%) | 0/118(0%) | Plus/Plus |
Query 3 ISSSDKSNHVVSKKGIGDSDSLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVGSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLK 356 ISSSDKSNHV+SKKGIGDSDSLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVGSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLK Subject 139 ISSSDKSNHVISKKGIGDSDSLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVGSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLK 256
Nucleotide Sequence (1752 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
434.9 | 434.9 | 13% | 2.049e-146 | 95% | BAF34850 |
Alignments
24.4 kDa hypothetical protein [Grapevine rupestris stem pitting-associated virus]
Sequence ID: dbj|BAF34850.1| Length: 221 Number of Matches: 1
Range 1: 1 to 221 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
434.9 bits(1117) | 0.0 | 210/221(95%) | 0/221(0%) | Minus/Plus |
Query 548 MNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFTAFTAGVPDTPNLSGRYIKPYSPGCAVKGRINILDEYLSVDDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNVRSDGLDEVITGSPFELDVEGVLICFGKEAVDLAVAHDSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ 1210 MNNLVKALSTFEFVG+YSVLRFPVVVHSVPGSGKSSLIREL+TEDESF AFTAGVPDTPNLSGRYIKPYSPGCAVKG+INILDEYLSV DISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFN+ SD DEVITGSPFELDVEGVLICFGKEAVDLA AH+SDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ Subject 1 MNNLVKALSTFEFVGIYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ 221
Nucleotide Sequence (347 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
202.2 | 202.2 | 31% | 2.707e-63 | 90% | AER41979 |
Alignments
RNA-dependent RNA polymerase, partial [Grapevine rupestris stem pitting-associated virus]
Sequence ID: gb|AER41979.1| Length: 158 Number of Matches: 1
Range 1: 18 to 126 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
202.2 bits(513) | 0.0 | 98/109(90%) | 0/109(0%) | Minus/Plus |
Query 1 VLGVFGPELGYIEKKLMQALKPNFYIHSGIGFDELNEWVRVRGFTDVCTESGYEAFDASQDHFILAFELQIMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS 327 VL F P + YIEKKLMQALKPNFYIHSG G DEL+EWVR RGFTDVCTES YEAFDASQDHFILAFELQIMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS Subject 18 VLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELDEWVRARGFTDVCTESDYEAFDASQDHFILAFELQIMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS 126
Nucleotide Sequence (373 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
254.2 | 254.2 | 32% | 1.389e-74 | 98% | AAR31772 |
Alignments
RNA-dependent RNA polymerase [Grapevine rupestris stem pitting-associated virus]
Sequence ID: gb|AAR31772.1| Length: 2161 Number of Matches: 1
Range 1: 825 to 944 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
254.2 bits(648) | 0.0 | 118/120(98%) | 0/120(0%) | Plus/Plus |
Query 8 VTKTRNPVEGNHCSLTIEPSEFFEMPRGMQSNFFHGVSNCLSGRVSLTFRRQKLEDDDQIFVSPQVPIEQNHEKLDRNMWQMGLHGIKKSISINGTSFTSDLCSCYSCHNFHKFKDLINN 367 V+KTRNPVEGNHCSLTIEPSEFFEMPRGMQSNFFHGVSNCLSGRVSLTFRRQKLEDDDQIFVSPQVPIEQNHEKLDRNMWQMGLHGIKKSISINGTSFTSDLCSC+SCHNFHKFKDLINN Subject 825 VSKTRNPVEGNHCSLTIEPSEFFEMPRGMQSNFFHGVSNCLSGRVSLTFRRQKLEDDDQIFVSPQVPIEQNHEKLDRNMWQMGLHGIKKSISINGTSFTSDLCSCFSCHNFHKFKDLINN 944
Nucleotide Sequence (509 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
167.5 | 167.5 | 16% | 2.222e-49 | 98% | NP_047283 |
Alignments
12.8 kDa protein [Rupestris stem pitting-associated virus]
Sequence ID: ref|NP_047283.1| Length: 117 Number of Matches: 1
Range 1: 1 to 82 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
167.5 bits(423) | 0.0 | 80/82(98%) | 0/82(0%) | Minus/Plus |
Query 3 MPFQQPANWAKTITPLTVGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTTRITYCGPKQSFPSSGIFGQSENFVPLM 248 MPFQQPANWAKTITPLTVGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGT ITYCGPKQSFPSSGIFGQSENFVPLM Subject 1 MPFQQPANWAKTITPLTVGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPKQSFPSSGIFGQSENFVPLM 82
Nucleotide Sequence (303 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
207.6 | 207.6 | 33% | 1.127e-58 | 100% | AAR31772 |
Alignments
RNA-dependent RNA polymerase [Grapevine rupestris stem pitting-associated virus]
Sequence ID: gb|AAR31772.1| Length: 2161 Number of Matches: 1
Range 1: 378 to 477 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
207.6 bits(527) | 0.0 | 100/100(100%) | 0/100(0%) | Minus/Plus |
Query 3 GSLLMPNIPKLVISFFCRMMPNALARLSSNFRESSLDSFVYALEPFNFSISLIDITPDFFEHLFLFSCLNELIEDNVEEVMDNSWFGLSNAQFDRQRCPF 302 GSLLMPNIPKLVISFFCRMMPNALARLSSNFRESSLDSFVYALEPFNFSISLIDITPDFFEHLFLFSCLNELIEDNVEEVMDNSWFGLSNAQFDRQRCPF Subject 378 GSLLMPNIPKLVISFFCRMMPNALARLSSNFRESSLDSFVYALEPFNFSISLIDITPDFFEHLFLFSCLNELIEDNVEEVMDNSWFGLSNAQFDRQRCPF 477
Nucleotide Sequence (714 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
416.0 | 416.0 | 32% | 1.751e-129 | 100% | AQN80512 |
Alignments
replicase [Grapevine rupestris stem pitting-associated virus]
Sequence ID: gb|AQN80512.1| Length: 2161 Number of Matches: 1
Range 1: 1674 to 1900 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
416.0 bits(1068) | 0.0 | 226/227(100%) | 0/227(0%) | Plus/Plus |
Query 34 REEKLCGDPWLKVMLFLGQXXXXXXXXXXXXXXXXXWFKTHIPLSNLESTRARWVGKMALKEYREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVSMFHEAVQEFEXXXXXXXXXTIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL 714 REEKLCGDPWLKVMLFLGQDEDCEVEELESECSNEEWFKTHIPLSNLESTRARWVGKMALKEYREVRCGYE TQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVSMFHEAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL Subject 1674 REEKLCGDPWLKVMLFLGQDEDCEVEELESECSNEEWFKTHIPLSNLESTRARWVGKMALKEYREVRCGYEATQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVSMFHEAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL 1900
Nucleotide Sequence (159 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
95.9 | 95.9 | 32% | 2.133e-22 | 94% | ABD79043 |
Alignments
triple gene block [Grapevine rupestris stem pitting-associated virus]
Sequence ID: gb|ABD79043.1| Length: 221 Number of Matches: 1
Nucleotide Sequence (756 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
499.2 | 499.2 | 32% | 5.741e-159 | 99% | AAR31772 |
Alignments
RNA-dependent RNA polymerase [Grapevine rupestris stem pitting-associated virus]
Sequence ID: gb|AAR31772.1| Length: 2161 Number of Matches: 1
Range 1: 966 to 1208 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
499.2 bits(1284) | 0.0 | 241/243(99%) | 0/243(0%) | Plus/Plus |
Query 27 GTGLSQVLAMPRSKKQSILVLEGALSLETDYGPKILGSFEVFKGDFNIKKIEDSSIFVISYRAPVRSTGKLRVHKSACSFSGSRELLLDCQIEASADFEIEDFNTFPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDPALSSPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPS 755 GTGLSQVLAMPRSKKQSILVLEGALSLETDYGPKILGSFEVFKGDFNIKKIEDSSIFVISYRAPVRSTGKLRVHKSACSFSGSRELLL CQIEASADFEIEDFNTFPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDPALS+PTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPS Subject 966 GTGLSQVLAMPRSKKQSILVLEGALSLETDYGPKILGSFEVFKGDFNIKKIEDSSIFVISYRAPVRSTGKLRVHKSACSFSGSRELLLGCQIEASADFEIEDFNTFPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDPALSNPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPS 1208
Nucleotide Sequence (1316 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
889.8 | 889.8 | 33% | 0 | 98% | AQN80517 |
Alignments
replicase [Grapevine rupestris stem pitting-associated virus]
Sequence ID: gb|AQN80517.1| Length: 2161 Number of Matches: 1
Range 1: 1088 to 1525 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
889.8 bits(2298) | 0.0 | 429/438(98%) | 0/438(0%) | Minus/Plus |
Query 2 LSTDGLALKAGIRSFVESESTVDPALSSLTIQKQLGENAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVEVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLVEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMT 1315 LSTDGLALKAGIRSFVESES VDPALS TI+KQLGENAYAENEMIALFC+RHHVRLIIITPEYEVSWKFGE+EWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREV+VLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMD+ECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRL+EGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMT Subject 1088 LSTDGLALKAGIRSFVESESPVDPALSGPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMT 1525
Nucleotide Sequence (490 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
263.5 | 263.5 | 26% | 1.599e-85 | 98% | ABD79043 |
Alignments
triple gene block [Grapevine rupestris stem pitting-associated virus]
Sequence ID: gb|ABD79043.1| Length: 221 Number of Matches: 1
Range 1: 95 to 221 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
263.5 bits(672) | 0.0 | 125/127(98%) | 0/127(0%) | Minus/Plus |
Query 109 DVLFSDPYQNISVPREAHFIKSKTCRFGKNTCKYLLSFGFDVHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ 489 DVLFSDPYQNISVPREAHFIKSKTCRFGKNTCKYLLSFGFDVHSDRSDEVITGSPFELDVEGVLICFGKEAV+LAAAHNSDFKLPCEVRG TFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ Subject 95 DVLFSDPYQNISVPREAHFIKSKTCRFGKNTCKYLLSFGFDVHSDRSDEVITGSPFELDVEGVLICFGKEAVNLAAAHNSDFKLPCEVRGTTFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ 221
Nucleotide Sequence (613 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
144.4 | 144.4 | 15% | 3.418e-38 | 97% | ADA79759 |
Alignments
coat protein [Grapevine rupestris stem pitting-associated virus]
Sequence ID: gb|ADA79759.1| Length: 259 Number of Matches: 1
Range 1: 1 to 90 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.4 bits(363) | 0.0 | 87/90(97%) | 0/90(0%) | Minus/Plus |
Query 1 MASQIGKLPGESNEAFXXXXXXXXXXXXXXQPEGSNTSPTLSGVLAKRKRVIENALSKSVDMREVLKHETVVISPNVMDEGAIDELIRAF 270 MASQIGKLPGESNEAFEARLKALELAR QKQPEGSNT PTLSGVLAKRKRVIENALSK+VDMREVLKHETVVISPNVMDEGAIDELIRAF Subject 1 MASQIGKLPGESNEAFEARLKALELARTQKQPEGSNTPPTLSGVLAKRKRVIENALSKTVDMREVLKHETVVISPNVMDEGAIDELIRAF 90
Nucleotide Sequence (303 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
183.3 | 229.2 | 37% | 3.013e-56 | 91% | ABC67233 |
Alignments
capsid protein, partial [Grapevine rupestris stem pitting-associated virus]
Sequence ID: gb|ABC67233.1| Length: 147 Number of Matches: 2
Range 1: 41 to 133 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
183.3 bits(464) | 0.0 | 85/93(91%) | 0/93(0%) | Minus/Plus |
Query 2 WAKKGFNENEKFDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF 280 + + G EN +FDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF Subject 41 FGESGIAENAQFDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF 133
Nucleotide Sequence (498 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
268.9 | 268.9 | 31% | 5.414e-79 | 97% | AAX40973 |
Alignments
replicase [Grapevine rupestris stem pitting-associated virus]
Sequence ID: gb|AAX40973.1| Length: 2161 Number of Matches: 1
Range 1: 1673 to 1824 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
268.9 bits(686) | 0.0 | 147/152(97%) | 0/152(0%) | Minus/Plus |
Query 1 VWEGKLYGGPWLKVMLFLGQDXXXXXXXXXXXXXXXEWFKTHIPLSNLESTRARWVGKMALKEHREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPPN 456 V E KLYG PWLKVMLFLGQDEDCEVEEMELECSNEEWFKTHIPLSNLESTRARWVGKMALKEHREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLD+FLSKVP N Subject 1673 VREEKLYGDPWLKVMLFLGQDEDCEVEEMELECSNEEWFKTHIPLSNLESTRARWVGKMALKEHREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKVPLN 1824
Nucleotide Sequence (2651 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
1758.4 | 1758.4 | 33% | 0 | 98% | AQN80512 |
Alignments
replicase [Grapevine rupestris stem pitting-associated virus]
Sequence ID: gb|AQN80512.1| Length: 2161 Number of Matches: 1
Range 1: 956 to 1838 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1758.4 bits(4553) | 0.0 | 865/883(98%) | 0/883(0%) | Plus/Plus |
Query 3 QCDRVVFATTGAGLSKLLDVPRSKKQSILVLEGALAMDTSYGPKILGSFEVFKGDFNIKKIEDGSIFVISYRAPVRSPGKLRVHRTECSFSGSREVLLGCQIEASADYDIDDFNKFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESIADPALSTQTVLKQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMSALFDITNEHIRHVEKIGNGPQSIKVDELREVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGVSVEGFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQXXXXXXXXXXXXXXXXXWFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMHEAVQE 2651 QCDRVVFATTGAGLSKLLDVPRSKKQSILVLEGALAMDT YGPKILGSFEVFKGDFNIKKIEDGSIFVISYRAPVRSPGKLRVHRTECSFSGSREVLLGCQIEASADYDIDDFNKFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESIADPALSTQTVLKQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMSALFDITNEHIRHVEKIGNGPQSIKVDELR+VKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAF DYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGVSVEGFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGF+++IG+NEGVREEKLCGDPWLKVMLFLGQDEDCEVEE+ESECSNEEWFKTHIPLSNLESTRARWVGKMALKE+REVRCGYE TQQFFDEHR G EQLSNACERFESIYPRHKGNDS+TFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHN ++ HEAVQE Subject 956 QCDRVVFATTGAGLSKLLDVPRSKKQSILVLEGALAMDTGYGPKILGSFEVFKGDFNIKKIEDGSIFVISYRAPVRSPGKLRVHRTECSFSGSREVLLGCQIEASADYDIDDFNKFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESIADPALSTQTVLKQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFTDYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGVSVEGFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFSINIGKNEGVREEKLCGDPWLKVMLFLGQDEDCEVEELESECSNEEWFKTHIPLSNLESTRARWVGKMALKEYREVRCGYEATQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVSMFHEAVQE 1838
Nucleotide Sequence (603 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
248.4 | 248.4 | 21% | 3.787e-79 | 97% | AQN80513 |
Alignments
triple gene block protein 1 [Grapevine rupestris stem pitting-associated virus]
Sequence ID: gb|AQN80513.1| Length: 221 Number of Matches: 1
Range 1: 1 to 126 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
248.4 bits(633) | 0.0 | 122/126(97%) | 0/126(0%) | Minus/Plus |
Query 3 MNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNISVPREAHFIKTKTCRC*HQTC 380 MNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNISVPREAHFIKTKTCR TC Subject 1 MNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNISVPREAHFIKTKTCRFGANTC 126
Nucleotide Sequence (523 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
298.5 | 298.5 | 31% | 3.085e-89 | 97% | AAR31772 |
Alignments
RNA-dependent RNA polymerase [Grapevine rupestris stem pitting-associated virus]
Sequence ID: gb|AAR31772.1| Length: 2161 Number of Matches: 1
Range 1: 1673 to 1834 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
298.5 bits(763) | 0.0 | 157/162(97%) | 0/162(0%) | Minus/Plus |
Query 3 VRAEKLCGDPWLKVMLFLGQDXXXXXXXXXXXXXXXEWFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGKSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLVHE 488 VR EKLCGDPWLKVMLFLGQDEDCEVEELE+ECSNEEWFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCG+SE+LSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANL+HE Subject 1673 VREEKLCGDPWLKVMLFLGQDEDCEVEELESECSNEEWFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEKLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMHE 1834
Nucleotide Sequence (325 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
213.4 | 213.4 | 33% | 4.074e-66 | 93% | AAQ19969 |
Alignments
replicase, partial [Grapevine rupestris stem pitting-associated virus]
Sequence ID: gb|AAQ19969.1| Length: 276 Number of Matches: 1
Range 1: 73 to 180 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
213.4 bits(542) | 0.0 | 100/108(93%) | 0/108(0%) | Minus/Plus |
Query 1 DVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSG 324 D++HSKF HHLLSFTP+ NLL SN+RCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDF+SLVISCGRSG Subject 73 DIIHSKFSHHLLSFTPMGNLLASNMRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFSSLVISCGRSG 180
Nucleotide Sequence (739 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
339.7 | 339.7 | 24% | 3.171e-114 | 94% | ABD79043 |
Alignments
triple gene block [Grapevine rupestris stem pitting-associated virus]
Sequence ID: gb|ABD79043.1| Length: 221 Number of Matches: 1
Range 1: 1 to 178 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
339.7 bits(870) | 0.0 | 168/178(94%) | 0/178(0%) | Minus/Plus |
Query 2 MNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVNDFSDFDVLFSDPYQNISVPRVALFMKSKSCRFGNNGC*FLLSFGFDVHSDRFDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKL 535 MNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVNDFSDFDVLFSDPYQNISVPR A F+KSK+CRFG N C +LLSFGFDVHSDR DEVITGSPFELDVEGVLICFGKEAV+LAAAHNSDFKL Subject 1 MNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVNDFSDFDVLFSDPYQNISVPREAHFIKSKTCRFGKNTCKYLLSFGFDVHSDRSDEVITGSPFELDVEGVLICFGKEAVNLAAAHNSDFKL 178
Nucleotide Sequence (426 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
167.2 | 167.2 | 26% | 7.678e-48 | 94% | AKZ17749 |
Alignments
coat protein [Grapevine rupestris stem pitting-associated virus]
Sequence ID: gb|AKZ17749.1| Length: 259 Number of Matches: 1
Range 1: 1 to 109 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
167.2 bits(422) | 0.0 | 103/109(94%) | 0/109(0%) | Minus/Plus |
Query 1 MASQVGKLPGESNXXXXXXXXXXXXXXXXXAPEVSNQPPILSGILAKRKRVIENALSKTVDMREVLRHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIAQ 327 MASQVGKLPGESNEAYEARLKALELARAQKAPEVSNQPP LSGILAKRKRVIENALSKTVDMREVLRHESVVLSPNVMDEGAIDELIRAFGESGI+E+ QF+VAIDIA+ Subject 1 MASQVGKLPGESNEAYEARLKALELARAQKAPEVSNQPPTLSGILAKRKRVIENALSKTVDMREVLRHESVVLSPNVMDEGAIDELIRAFGESGIAENAQFDVAIDIAR 109
Nucleotide Sequence (181 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
79.3 | 79.3 | 22% | 5.379e-16 | 97% | BAF34849 |
Alignments
RNA-dependent RNA polymerase, partial [Grapevine rupestris stem pitting-associated virus]
Sequence ID: dbj|BAF34849.1| Length: 266 Number of Matches: 1
Nucleotide Sequence (184 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
108.6 | 108.6 | 31% | 5.224e-27 | 95% | ABD79043 |
Alignments
triple gene block [Grapevine rupestris stem pitting-associated virus]
Sequence ID: gb|ABD79043.1| Length: 221 Number of Matches: 1
Range 1: 4 to 60 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
108.6 bits(270) | 0.0 | 54/57(95%) | 0/57(0%) | Minus/Plus |
Query 13 LVKALSTFEFVGVYSVLRFPVVVHSVPGSSKSSLIRELITEDESFTAFTAGVPNTPN 183 LVKALSTFEFVGVYSVLRFPVVVHSVPGS KSSLIRELITEDESF AFTAGVP+TPN Subject 4 LVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGVPDTPN 60
Nucleotide Sequence (1006 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
233.4 | 233.4 | 12% | 1.258e-70 | 99% | ADA79799 |
Alignments
coat protein [Grapevine rupestris stem pitting-associated virus]
Sequence ID: gb|ADA79799.1| Length: 259 Number of Matches: 1
Range 1: 1 to 116 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
233.4 bits(594) | 0.0 | 115/116(99%) | 0/116(0%) | Minus/Plus |
Query 223 MASPPGKLPGESNEAFEARLKSLELARAQKQPTGSNQPPTLGGVLAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIARHCSVVGS 570 MASPPGKLPGESNEAFEARLKSLELARAQKQPTGSNQPPTLGGVLAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIARHCS VGS Subject 1 MASPPGKLPGESNEAFEARLKSLELARAQKQPTGSNQPPTLGGVLAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIARHCSDVGS 116
Nucleotide Sequence (178 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
63.9 | 63.9 | 18% | 1.508e-10 | 97% | ABD79043 |
Alignments
triple gene block [Grapevine rupestris stem pitting-associated virus]
Sequence ID: gb|ABD79043.1| Length: 221 Number of Matches: 1
Nucleotide Sequence (783 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
525.0 | 525.0 | 33% | 5.013e-168 | 98% | AQN80517 |
Alignments
replicase [Grapevine rupestris stem pitting-associated virus]
Sequence ID: gb|AQN80517.1| Length: 2161 Number of Matches: 1
Range 1: 1271 to 1530 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
525.0 bits(1351) | 0.0 | 255/260(98%) | 0/260(0%) | Minus/Plus |
Query 4 KIGNGPQSIKVDELRKVKRSALDLLSLNGSKTTYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDEECKVAKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRRDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFINPMFDSRLPCNFKKGSMTAAFAD 783 KIGNGPQSIKVDELRKVKRSALDLLSLNGSK TYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK+DLEMDEECKV KAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIR DAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRF+NPMFDSRLPCNFKKGSMTAAFAD Subject 1271 KIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFAD 1530
Nucleotide Sequence (137 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
86.7 | 86.7 | 33% | 5.087e-19 | 96% | ABD79043 |
Alignments
triple gene block [Grapevine rupestris stem pitting-associated virus]
Sequence ID: gb|ABD79043.1| Length: 221 Number of Matches: 1
Nucleotide Sequence (388 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
246.9 | 246.9 | 31% | 5.063e-72 | 98% | AQN80527 |
Alignments
replicase [Grapevine rupestris stem pitting-associated virus]
Sequence ID: gb|AQN80527.1| Length: 2161 Number of Matches: 1
Range 1: 1322 to 1441 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
246.9 bits(629) | 0.0 | 117/120(98%) | 0/120(0%) | Plus/Plus |
Query 27 ILGVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKSDLEMDDGCKVAKAGRSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQ 386 + GVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKSDLEMDDGCKVAKAGRSKKEGW+VVTFEVFLRKVAGLKAGHCVIFDEVQ Subject 1322 LTGVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKSDLEMDDGCKVAKAGRSKKEGWNVVTFEVFLRKVAGLKAGHCVIFDEVQ 1441
Nucleotide Sequence (986 letters)
Query ID: | ds2016-133_52 |
Query definition: | No definition line |
Query length: | 332 |
Program: | BLASTX 2.2.29+ |
Database: | /bank/blastdb/nr |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
580.5 | 580.5 | 30% | 0 | 98% | AQN80512 |
Alignments
replicase [Grapevine rupestris stem pitting-associated virus]
Sequence ID: gb|AQN80512.1| Length: 2161 Number of Matches: 1
Range 1: 372 to 668 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
580.5 bits(1495) | 0.0 | 292/297(98%) | 0/297(0%) | Plus/Plus |
Query 2 ISCGRSGSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGNAHFNRQRAPYSLGISHWLNSPFSVEHKFAGAINHQILHVALSLVPLSNDPFFKLTPREVDSALSSVRMALGITGQSKLFGFLVNDTLINEMQRRYKLRLAKHLKSLTWYFHFCGCQWXXXXXXXXXXXXGDRKTSFADLDCNVAQIYRLVSAQVTAPGVLLGLTKVYARYSNPQQQLNSLNVLEGKSCKSVQPSDTYSGET 892 ISCGRSGSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGN HFNRQRAPYSLGISHWLNSPFSVEHKFAGAINHQILHVALSLVPLSNDPFFKLTPREVDSALSSVRMALGITGQSKLFGFLVNDTLINEMQRRYKLRLAKHLKSLTWYFHFCGCQWFLLNRRVNL+FLGDRK+SFADLDCNVAQIYRLVSAQVTAPGVLLGLTKVYA YSNPQQQLNSLNVLEGKSCK+VQPSDTYSGET Subject 372 ISCGRSGSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGNVHFNRQRAPYSLGISHWLNSPFSVEHKFAGAINHQILHVALSLVPLSNDPFFKLTPREVDSALSSVRMALGITGQSKLFGFLVNDTLINEMQRRYKLRLAKHLKSLTWYFHFCGCQWFLLNRRVNLKFLGDRKSSFADLDCNVAQIYRLVSAQVTAPGVLLGLTKVYAHYSNPQQQLNSLNVLEGKSCKTVQPSDTYSGET 668