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Nucleotide Sequence (385 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 1 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
39
78
117
156
195
234
273
312
351
385

Descriptions

Alignments

Grapevine Red Globe virus isolate Graciano T101, complete genome

Sequence ID: KX171166.1 Length: 6863 Number of Matches: 10

Range 1: 189 to 332 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
107.4 bits(228) 0.0 41/48(85%) 0/48(0%) Plus/Plus
Query      236  MASFTKLAISFPASSVPYSEEFPNHSFWSTPGSNVFTPYPNMTPTNFP  379
                MAS  KLAISFPASSVPYS+EFP+HSFW+TPGSN FTPYP+MTPTNFP
Subject    189  MASSNKLAISFPASSVPYSKEFPDHSFWATPGSNDFTPYPSMTPTNFP  332

Range 2: 1 to 69 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.8 bits(133) 0.0 23/23(100%) 0/23(0%) Plus/Plus
Query       48  VYLNQPHLDSGYLAHIRDLTCPC  116
                VYLNQPHLDSGYLAHIRDLTCPC
Subject      1  VYLNQPHLDSGYLAHIRDLTCPC  69

Range 3: 78 to 119 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
26.7 bits(52) 0.0 12/14(86%) 0/14(0%) Plus/Plus
Query      125  RQVSFSLFSSQP*R  166
                RQVSF LFS QP*R
Subject     78  RQVSFFLFSFQP*R  119

Range 4: 3 to 122 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.8 bits(170) 0.0 36/40(90%) 0/40(0%) Minus/Minus
Query       50  NALRLRREKGKGDLSKLKQGQVRSRM*AR*PESR*GWLRY  169
                NALRL+REK + DLSKLKQGQVRSRM*AR*PESR*GWLRY
Subject      3  NALRLKREKEERDLSKLKQGQVRSRM*AR*PESR*GWLRY  122

Range 5: 179 to 292 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.7 bits(161) 0.0 32/38(84%) 0/38(0%) Minus/Minus
Query      226  TFEPGVDQKEWLGNSSE*GTDEAGKEMASLVKEAIEDT  339
                +FEPGV QKEW GNS E*GTDEAGKEMASL++EAIEDT
Subject    179  SFEPGVAQKEWSGNSLE*GTDEAGKEMASLLEEAIEDT  292

Range 6: 1 to 330 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
122.0 bits(260) 0.0 83/110(75%) 0/110(0%) Minus/Minus
Query       48  GSWWGSCWDRG*KHSNRGWTRRNGWGIPRSKEXXXXXXXXXXXXXRPLRIRVGEGKGKRRRIGSERTLXXXXXXXXXXXXXRLVEAEARTS*ITNVSKITRIEMRLVEIH  377
                G+WWGS   R * HSNR   RRNG GIP SKERM++G+KWRA  +RPL+IRV EGK  R +  SERTLRERAKAEKRKG++RLVEAEARTS*ITNVSKITRIEMRLVEIH
Subject      1  GNWWGSWRGRE*NHSNRELPRRNGRGIPWSKERMRQGKKWRACWRRPLKIRVSEGKRIRIKRRSERTLRERAKAEKRKGRKRLVEAEARTS*ITNVSKITRIEMRLVEIH  330

Range 7: 125 to 331 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
89.0 bits(188) 0.0 46/69(67%) 0/69(0%) Plus/Plus
Query      172  RNVXXXXXXXXXXXXXXTRILNGLFHQARHFLPRFIRSLLRGIPQPFLLVHPRFECFHPLSQHDPHQLP  378
                RNVLSL + +L  FPS TRI NGL  QARHF P  IRSLL+GIP+PFLL + RFE FH L  HDPHQ P
Subject    125  RNVLSLLLFILILFPSLTRIFNGLLQQARHFFPCLIRSLLQGIPRPFLLGNSRFE*FHSLPLHDPHQFP  331

Range 8: 3 to 32 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
27.6 bits(54) 0.0 10/10(100%) 0/10(0%) Plus/Plus
Query       50  VSQPASSRFW  79
                VSQPASSRFW
Subject      3  VSQPASSRFW  32

Range 9: 2 to 82 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.0 bits(142) 0.0 27/27(100%) 0/27(0%) Minus/Minus
Query       49  CRS*SKDKLDHECEQDNQNRDEAG*DT  129
                CRS*SKDKLDHECEQDNQNRDEAG*DT
Subject      2  CRS*SKDKLDHECEQDNQNRDEAG*DT  82

Range 10: 5365 to 5412 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.1 bits(44) 0.0 8/16(50%) 0/16(0%) Minus/Minus
Query      300  G*KHSNRGWTRRNGWG  347
                G K S  GW +  GWG
Subject   5365  GEKASPLGWAKWGGWG  5412

Grapevine Red Globe virus isolate Graciano T101, complete genome

Sequence ID: NC_030693.1 Length: 6863 Number of Matches: 10

Range 1: 189 to 332 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
107.4 bits(228) 0.0 41/48(85%) 0/48(0%) Plus/Plus
Query      236  MASFTKLAISFPASSVPYSEEFPNHSFWSTPGSNVFTPYPNMTPTNFP  379
                MAS  KLAISFPASSVPYS+EFP+HSFW+TPGSN FTPYP+MTPTNFP
Subject    189  MASSNKLAISFPASSVPYSKEFPDHSFWATPGSNDFTPYPSMTPTNFP  332

Range 2: 1 to 69 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.8 bits(133) 0.0 23/23(100%) 0/23(0%) Plus/Plus
Query       48  VYLNQPHLDSGYLAHIRDLTCPC  116
                VYLNQPHLDSGYLAHIRDLTCPC
Subject      1  VYLNQPHLDSGYLAHIRDLTCPC  69

Range 3: 78 to 119 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
26.7 bits(52) 0.0 12/14(86%) 0/14(0%) Plus/Plus
Query      125  RQVSFSLFSSQP*R  166
                RQVSF LFS QP*R
Subject     78  RQVSFFLFSFQP*R  119

Range 4: 3 to 122 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.8 bits(170) 0.0 36/40(90%) 0/40(0%) Minus/Minus
Query       50  NALRLRREKGKGDLSKLKQGQVRSRM*AR*PESR*GWLRY  169
                NALRL+REK + DLSKLKQGQVRSRM*AR*PESR*GWLRY
Subject      3  NALRLKREKEERDLSKLKQGQVRSRM*AR*PESR*GWLRY  122

Range 5: 179 to 292 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.7 bits(161) 0.0 32/38(84%) 0/38(0%) Minus/Minus
Query      226  TFEPGVDQKEWLGNSSE*GTDEAGKEMASLVKEAIEDT  339
                +FEPGV QKEW GNS E*GTDEAGKEMASL++EAIEDT
Subject    179  SFEPGVAQKEWSGNSLE*GTDEAGKEMASLLEEAIEDT  292

Range 6: 1 to 330 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
122.0 bits(260) 0.0 83/110(75%) 0/110(0%) Minus/Minus
Query       48  GSWWGSCWDRG*KHSNRGWTRRNGWGIPRSKEXXXXXXXXXXXXXRPLRIRVGEGKGKRRRIGSERTLXXXXXXXXXXXXXRLVEAEARTS*ITNVSKITRIEMRLVEIH  377
                G+WWGS   R * HSNR   RRNG GIP SKERM++G+KWRA  +RPL+IRV EGK  R +  SERTLRERAKAEKRKG++RLVEAEARTS*ITNVSKITRIEMRLVEIH
Subject      1  GNWWGSWRGRE*NHSNRELPRRNGRGIPWSKERMRQGKKWRACWRRPLKIRVSEGKRIRIKRRSERTLRERAKAEKRKGRKRLVEAEARTS*ITNVSKITRIEMRLVEIH  330

Range 7: 125 to 331 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
89.0 bits(188) 0.0 46/69(67%) 0/69(0%) Plus/Plus
Query      172  RNVXXXXXXXXXXXXXXTRILNGLFHQARHFLPRFIRSLLRGIPQPFLLVHPRFECFHPLSQHDPHQLP  378
                RNVLSL + +L  FPS TRI NGL  QARHF P  IRSLL+GIP+PFLL + RFE FH L  HDPHQ P
Subject    125  RNVLSLLLFILILFPSLTRIFNGLLQQARHFFPCLIRSLLQGIPRPFLLGNSRFE*FHSLPLHDPHQFP  331

Range 8: 3 to 32 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
27.6 bits(54) 0.0 10/10(100%) 0/10(0%) Plus/Plus
Query       50  VSQPASSRFW  79
                VSQPASSRFW
Subject      3  VSQPASSRFW  32

Range 9: 2 to 82 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.0 bits(142) 0.0 27/27(100%) 0/27(0%) Minus/Minus
Query       49  CRS*SKDKLDHECEQDNQNRDEAG*DT  129
                CRS*SKDKLDHECEQDNQNRDEAG*DT
Subject      2  CRS*SKDKLDHECEQDNQNRDEAG*DT  82

Range 10: 5365 to 5412 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.1 bits(44) 0.0 8/16(50%) 0/16(0%) Minus/Minus
Query      300  G*KHSNRGWTRRNGWG  347
                G K S  GW +  GWG
Subject   5365  GEKASPLGWAKWGGWG  5412

Grapevine Red Globe virus isolate Graciano T90, complete genome

Sequence ID: KX109927.1 Length: 6863 Number of Matches: 10

Range 1: 189 to 332 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
109.7 bits(233) 0.0 41/48(85%) 0/48(0%) Plus/Plus
Query      236  MASFTKLAISFPASSVPYSEEFPNHSFWSTPGSNVFTPYPNMTPTNFP  379
                MASFTKLAI+FPASSVPYS++FPNHSFW+ PGSN FTPYP MTPTNFP
Subject    189  MASFTKLAITFPASSVPYSKDFPNHSFWAIPGSNDFTPYPTMTPTNFP  332

Range 2: 1 to 69 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.8 bits(133) 0.0 23/23(100%) 0/23(0%) Plus/Plus
Query       48  VYLNQPHLDSGYLAHIRDLTCPC  116
                VYLNQPHLDSGYLAHIRDLTCPC
Subject      1  VYLNQPHLDSGYLAHIRDLTCPC  69

Range 3: 78 to 119 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.5 bits(58) 0.0 13/14(93%) 0/14(0%) Plus/Plus
Query      125  RQVSFSLFSSQP*R  166
                RQVSFSLFS QP*R
Subject     78  RQVSFSLFSFQP*R  119

Range 4: 3 to 122 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
86.3 bits(182) 0.0 38/40(95%) 0/40(0%) Minus/Minus
Query       50  NALRLRREKGKGDLSKLKQGQVRSRM*AR*PESR*GWLRY  169
                NALRL+REKGK DLSKLKQGQVRSRM*AR*PESR*GWLRY
Subject      3  NALRLKREKGKRDLSKLKQGQVRSRM*AR*PESR*GWLRY  122

Range 5: 179 to 292 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
74.8 bits(157) 0.0 31/38(82%) 0/38(0%) Minus/Minus
Query      226  TFEPGVDQKEWLGNSSE*GTDEAGKEMASLVKEAIEDT  339
                +FEPG+ QKEWLG S E*GTDEAGK MASLVKEAI+DT
Subject    179  SFEPGIAQKEWLGKSLE*GTDEAGKVMASLVKEAIDDT  292

Range 6: 1 to 192 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.0 bits(166) 0.0 54/64(84%) 0/64(0%) Minus/Minus
Query       48  PLRIRVGEGKGKRRRIGSERTLXXXXXXXXXXXXXRLVEAEARTS*ITNVSKITRIEMRLVEIH  239
                PL IRV E +  RR+  SERTLRERAKAEKRKGK+RLVEAEARTS*ITNVSKITRIEMRLVEIH
Subject      1  PLMIRVSERRRIRRKRRSERTLRERAKAEKRKGKKRLVEAEARTS*ITNVSKITRIEMRLVEIH  192

Range 7: 238 to 330 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.1 bits(114) 0.0 21/31(68%) 0/31(0%) Minus/Minus
Query      285  GSWWGSCWDRG*KHSNRGWTRRNGWGIPRSK  377
                GSWWGS   + * HSNRG  RRNGWG P SK
Subject    238  GSWWGSWLGKE*NHSNRGLPRRNGWGSPWSK  330

Range 8: 125 to 331 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
103.7 bits(220) 0.0 49/69(71%) 0/69(0%) Plus/Plus
Query      172  RNVXXXXXXXXXXXXXXTRILNGLFHQARHFLPRFIRSLLRGIPQPFLLVHPRFECFHPLSQHDPHQLP  378
                RNVLSL + LL    S TRI+NGLFHQARH LPR IR LL+G+PQPFLL +PRFE FH L  HDPHQLP
Subject    125  RNVLSLLLFLLILLLSLTRIINGLFHQARHHLPRLIRPLLQGLPQPFLLGNPRFE*FHSLPNHDPHQLP  331

Range 9: 3 to 32 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
27.6 bits(54) 0.0 10/10(100%) 0/10(0%) Plus/Plus
Query       50  VSQPASSRFW  79
                VSQPASSRFW
Subject      3  VSQPASSRFW  32

Range 10: 2 to 82 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.0 bits(142) 0.0 27/27(100%) 0/27(0%) Minus/Minus
Query       49  CRS*SKDKLDHECEQDNQNRDEAG*DT  129
                CRS*SKDKLDHECEQDNQNRDEAG*DT
Subject      2  CRS*SKDKLDHECEQDNQNRDEAG*DT  82

Grapevine Red Globe virus isolate CF BR replicase polyprotein and coat protein genes, complete cds

Sequence ID: KX828704.1 Length: 6574 Number of Matches: 8

Range 1: 99 to 242 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
109.2 bits(232) 0.0 41/48(85%) 0/48(0%) Plus/Plus
Query      236  MASFTKLAISFPASSVPYSEEFPNHSFWSTPGSNVFTPYPNMTPTNFP  379
                MASFTKLAISFPASSVP+S+EFPNHSFW+ PGSN FTPYP MTPTN+P
Subject     99  MASFTKLAISFPASSVPFSKEFPNHSFWAIPGSNDFTPYPTMTPTNYP  242

Range 2: 28 to 69 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.9 bits(61) 0.0 12/14(86%) 0/14(0%) Plus/Plus
Query        2  AFS*RPFASYPSPY  43
                AFS*RPFA YP PY
Subject     28  AFS*RPFALYPFPY  69

Range 3: 79 to 102 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.5 bits(45) 0.0 7/8(88%) 0/8(0%) Plus/Plus
Query      216  LTYSYPQW  239
                LTY YPQW
Subject     79  LTYPYPQW  102

Range 4: 35 to 241 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.4 bits(215) 0.0 54/69(78%) 0/69(0%) Plus/Plus
Query      172  RNVXXXXXXXXXXXXXXTRILNGLFHQARHFLPRFIRSLLRGIPQPFLLVHPRFECFHPLSQHDPHQLP  378
                RNVLSL IL L PFPSPTRILNGLFHQARH LPR IRS L+GIP+ FLL H RFE  HPL  HDPHQLP
Subject     35  RNVLSLSILFLIPFPSPTRILNGLFHQARHLLPRLIRSFLQGIPKSFLLGHSRFE*LHPLPHHDPHQLP  241

Range 5: 89 to 202 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.3 bits(147) 0.0 31/38(82%) 0/38(0%) Minus/Minus
Query      226  TFEPGVDQKEWLGNSSE*GTDEAGKEMASLVKEAIEDT  339
                +FEPG+ QKE  GNS E GTDEAGKEMASLVKEAIEDT
Subject     89  SFEPGMAQKE*FGNSLEKGTDEAGKEMASLVKEAIEDT  202

Range 6: 37 to 102 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
44.6 bits(91) 0.0 19/22(86%) 0/22(0%) Minus/Minus
Query      174  PLRIRVGEGKGKRRRIGSERTL  239
                PLRIRVGEGKG R+RI SERTL
Subject     37  PLRIRVGEGKGIRKRIESERTL  102

Range 7: 145 to 240 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.0 bits(129) 0.0 23/32(72%) 0/32(0%) Minus/Minus
Query      282  GSWWGSCWDRG*KHSNRGWTRRNGWGIPRSKE  377
                GSWWGS W RG* HSNR W RRN  GIP  KE
Subject    145  GSWWGSWWGRG*SHSNREWPRRNDLGIPWRKE  240

Range 8: 29 to 64 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.0 bits(57) 0.0 11/12(92%) 0/12(0%) Minus/Minus
Query        3  EKDRKRKDVTRT  38
                EKDR+RKDVTRT
Subject     29  EKDRERKDVTRT  64

Grapevine Red Globe virus isolate Graciano T53, complete genome

Sequence ID: KX171167.1 Length: 6851 Number of Matches: 9

Range 1: 183 to 326 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.9 bits(179) 0.0 32/48(67%) 0/48(0%) Plus/Plus
Query      236  MASFTKLAISFPASSVPYSEEFPNHSFWSTPGSNVFTPYPNMTPTNFP  379
                MA+  KLAIS PA+SVPYS++FP+HSFW+ P SN  +P P MTPTNFP
Subject    183  MAALNKLAISIPATSVPYSKDFPHHSFWTIPESNDISPLPLMTPTNFP  326

Range 2: 2 to 64 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.2 bits(112) 0.0 20/21(95%) 0/21(0%) Plus/Plus
Query       54  LNQPHLDSGYLAHIRDLTCPC  116
                LNQPHLDSGYLAHIRDLTC C
Subject      2  LNQPHLDSGYLAHIRDLTCLC  64

Range 3: 1 to 108 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
65.7 bits(137) 0.0 29/36(81%) 0/36(0%) Minus/Minus
Query       53  RLRREKGKGDLSKLKQGQVRSRM*AR*PESR*GWLR  160
                + +REKG+ DLS+LKQ QVRSRM*AR*PESR*GWLR
Subject      1  KAKREKGERDLSELKQRQVRSRM*AR*PESR*GWLR  108

Range 4: 179 to 286 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.2 bits(101) 0.0 20/36(56%) 0/36(0%) Minus/Minus
Query      232  TFEPGVDQKEWLGNSSE*GTDEAGKEMASLVKEAIE  339
                +F+ G+ QKEW G S E*GT+ AG EMASL++ A++
Subject    179  SFDSGMVQKEWWGKSLE*GTEVAGMEMASLLRAAMD  286

Range 5: 3 to 77 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.6 bits(128) 0.0 24/25(96%) 0/25(0%) Minus/Minus
Query       55  CRS*SKDKLDHECEQDNQNRDEAG*  129
                CRS*S+DKLDHECEQDNQNRDEAG*
Subject      3  CRS*SRDKLDHECEQDNQNRDEAG*  77

Range 6: 232 to 285 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
27.2 bits(53) 0.0 11/18(61%) 0/18(0%) Minus/Minus
Query      285  HSNRGWTRRNGWGIPRSK  338
                HS   W+RRNG G P SK
Subject    232  HSILEWSRRNGGGSP*SK  285

Range 7: 179 to 325 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.7 bits(113) 0.0 24/49(49%) 0/49(0%) Plus/Plus
Query      232  LNGLFHQARHFLPRFIRSLLRGIPQPFLLVHPRFECFHPLSQHDPHQLP  378
                ++G   QARH  PR +  LL G+P PFLL H R E       HDPHQ P
Subject    179  IHGRPQQARHLHPRHLCPLL*GLPPPFLLDHSRIE*HLSSPSHDPHQFP  325

Range 8: 1 to 27 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.8 bits(50) 0.0 9/9(100%) 0/9(0%) Plus/Plus
Query       53  SQPASSRFW  79
                SQPASSRFW
Subject      1  SQPASSRFW  27

Range 9: 2 to 79 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.1 bits(103) 0.0 24/26(92%) 0/26(0%) Minus/Minus
Query       54  LVEAEARTS*ITNVSKITRIEMRLVE  131
                LV AEA TS*ITNVSKITRIEMRLVE
Subject      2  LVGAEAETS*ITNVSKITRIEMRLVE  79