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Queries

Nucleotide Sequence (346 letters)

Query ID:ds2016-57_42
Query definition:No definition line
Query length:352
Program:TBLASTX 2.2.29+
Database:/save/stheil/db/refseq_vir/viral.genomic.fna

Graphic Summary

Distribution of 2 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
35
70
105
140
175
210
245
280
315
346

Descriptions

Alignments

Amasya cherry disease associated chrysovirus segment 1, complete sequence

Sequence ID: Length: 3399 Number of Matches: 3

Range 1: 2148 to 2423 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
102.3 bits(217) 0.0 43/92(47%) 0/92(0%) Minus/Plus
Query        1  DDGVFKLDNGLFSGWRGTTWLNCWLNYAYIQCALVVYSRLFPNSSLKYIDHGGDDIDMAFLEFADSVRFLSVMNLMKFDATQIKQMIADEAE  276
                D  V K++ GL+SGWRGT++LN  LN  Y  CA + Y R+       YIDHGGDDID       D V+   VM  M+F+A +IKQMI  ++E
Subject   2148  DGEVHKIETGLYSGWRGTSFLNSVLNSCYTTCARMSYERIHKYDPFVYIDHGGDDIDGGIRNMGDGVKMPVVMEKMQFEAQKIKQMIGIDSE  2423

Range 2: 2115 to 2405 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.1 bits(114) 0.0 30/97(31%) 0/97(0%) Plus/Minus
Query       19  HLFYLRCVELH*VHNA*KSYRICKLQKRHIYVISTMVDIFQ*AVRKKSRVNNQCTLYICIVQPTVQPCCTSPT*KQTIIQFEHPVIRFKPHRVHAIC  309
                HLF L  +ELH +H+    Y I  +    IY+I+T++DI +  +     V +  T  +  +Q  V+  CTSP * QT     +  IR   + +   C
Subject   2115  HLFNLLSLELHLLHHHRHLYTITHVPNSSIYIITTVIDIHERIIFVYPFVGHSSTCCVT*IQH*VEK*CTSPP*VQTCFYLVYLTIRIHQNHIPHTC  2405

Range 3: 2147 to 2422 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.5 bits(106) 0.0 37/92(40%) 0/92(0%) Plus/Minus
Query        2  SASSAIICFICVASNFIRFITLRNLTESANSRNAISMSSPPWSIYFSELLGKSLE*TTSAHCIYA*FSQQFNHVVPLQPENKPLSSLNTPSS  277
                S S  IIC I  ASN I  IT    T S       S+SSPP SIY +      L *   AH +   F+ +  + VPL PE +P+S L T  S
Subject   2147  SESIPIICLIF*ASNCIFSITTGIFTPSPMFLIPPSISSPP*SIYTNGSYLCILS*DILAHVV*HEFNTELRNDVPLHPEYRPVSILCTSPS  2422

Helminthosporium victoriae 145S virus

Sequence ID: Length: 3612 Number of Matches: 3

Range 1: 2260 to 2541 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
99.6 bits(211) 0.0 42/94(45%) 0/94(0%) Minus/Plus
Query        1  KTDDGVFKLDNGLFSGWRGTTWLNCWLNYAYIQCALVVYSRLFPNSSLKYIDHGGDDIDMAFLEFADSVRFLSVMNLMKFDATQIKQMIADEAE  282
                K D  + KLD GL+SGWRGTTW N  LN  Y+  A + + RL+      + D GGDD+D  F +  D+ R L+V++ M F+AT+ KQMI   +E
Subject   2260  KRDGTLVKLDKGLYSGWRGTTWDNTVLNGCYMGVAKLCFVRLYKYDCALFADQGGDDVDQEFAQPEDAYRMLAVLDRMGFEATKSKQMIGRNSE  2541

Range 2: 2412 to 2525 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.5 bits(69) 0.0 19/38(50%) 0/38(0%) Plus/Minus
Query       17  IICFICVASNFIRFITLRNLTESANSRNAISMSSPPWS  130
                IICF  VAS  I   T   L  S+   N+ S SSPPWS
Subject   2412  IICFDFVASKPILSSTASIL*ASSGCANS*STSSPPWS  2525

Range 3: 2262 to 2342 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.1 bits(55) 0.0 12/27(44%) 0/27(0%) Plus/Minus
Query      200  FSQQFNHVVPLQPENKPLSSLNTPSSV  280
                F+   + VVP QPE  PLSS  +  S+
Subject   2262  FNTVLSQVVPRQPEYNPLSSFTSVPSL  2342

Penicillium chrysogenum virus segment 1, complete genome

Sequence ID: Length: 3562 Number of Matches: 2

Range 1: 2284 to 2559 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.0 bits(214) 0.0 44/92(48%) 0/92(0%) Minus/Plus
Query        1  DDGVFKLDNGLFSGWRGTTWLNCWLNYAYIQCALVVYSRLFPNSSLKYIDHGGDDIDMAFLEFADSVRFLSVMNLMKFDATQIKQMIADEAE  276
                D  V K+  GL+SGWRGTTW+N  LN+ Y+  AL    RLF    + Y+DHGGDDID+   E A    FL VM+ M F A + KQM    +E
Subject   2284  DGNVHKIWRGLYSGWRGTTWINTVLNFCYVHIALQNVERLFGVRVVLYVDHGGDDIDLGLSEPAVMPWFLEVMDAMLFKANKWKQMFGTRSE  2559

Range 2: 2218 to 2289 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
27.2 bits(53) 0.0 11/24(46%) 0/24(0%) Minus/Plus
Query      268  KGYDIFVSAIADSMYSMWLKTDDG  339
                + Y +FV AI   MY+M L   DG
Subject   2218  RDYAVFVEAIVAGMYNMGLHDRDG  2289

Isaria javanica chrysovirus 1 isolate IjCV-1 RNA-dependent RNA polymerase (RdRp) gene, complete cds

Sequence ID: Length: 3593 Number of Matches: 1

Range 1: 2323 to 2589 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.5 bits(176) 0.0 36/89(40%) 0/89(0%) Minus/Plus
Query        1  VFKLDNGLFSGWRGTTWLNCWLNYAYIQCALVVYSRLFPNSSLKYIDHGGDDIDMAFLEFADSVRFLSVMNLMKFDATQIKQMIADEAE  267
                V K+  GL+SGWRGTTW+N  LN+ Y+  AL    R+  +  +  +DHGGDD+D+   +      FL +M+ M F A + KQM    +E
Subject   2323  VHKIWTGLYSGWRGTTWINSTLNFCYVFIALENLRRITGSEVVLMVDHGGDDLDLMLSQPDVMPLFLEIMDNMLFKANKWKQMFGLRSE  2589

Rosellinia necatrix megabirnavirus 1/W779 segment L1, complete genome

Sequence ID: Length: 8931 Number of Matches: 1

Range 1: 7498 to 7740 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
65.7 bits(137) 0.0 29/81(36%) 0/81(0%) Minus/Plus
Query        7  GLFSGWRGTTWLNCWLNYAYIQCALVVYSRLFPNSSLKYIDHGGDDIDMAFLEFADSVRFLSVMNLMKFDATQIKQMIADE  249
                GL+SGWR T+++NC  N AY +        +F +    Y  H GDD    + E  D++RF+S M L K +    KQ++  E
Subject   7498  GLWSGWRTTSFINCSFNVAYCESNFDSMHHIFNSDMPLYRVHAGDDFFGTYAEEIDAMRFVSSMPLAKHEVNAQKQLVGGE  7740

Nucleotide Sequence (592 letters)

Query ID:ds2016-57_42
Query definition:No definition line
Query length:352
Program:TBLASTX 2.2.29+
Database:/save/stheil/db/refseq_vir/viral.genomic.fna

Graphic Summary

Distribution of 2 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
60
120
180
240
300
360
420
480
540
592

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
132.1 132.1 31% 4.234e-30 33% NC_033277
145.9 145.9 30% 3.081e-34 34% NC_007539
41.8 75.9 16% 1.796e-06 28% NC_005978

Alignments

Isaria javanica chrysovirus 1 isolate IjCV-1 RNA-dependent RNA polymerase (RdRp) gene, complete cds

Sequence ID: Length: 3593 Number of Matches: 1

Range 1: 2911 to 3465 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
132.1 bits(282) 0.0 61/185(33%) 0/185(0%) Plus/Plus
Query        3  LTEVIPEFIPTSERRIVPGFKSSLDYVKHLELDFNKRGLSLVRAGELAERMAEDNFNFNETADHQKWVEIMNKVYVIKEVRLVIEHRDDMVCFSEMLKADEDALNNPMYGVAAKYSEYWNHIELNGRKLTKDELIGVVTYLMVNPEVLEFKGNLYYRRLLPEFLAYKITYFCKDKINNYAWTMAE  557
                L + +P+      + +VP  K+S DYV+ L  D  +  L L R  ELA ++AED+++  +T D  +W E+++    +   R VIE  +D   F   L+ + D      +  AA++ EY  ++  NG  +TK+EL+ +++   V+ E +EF G++YY+RL+PEF+A +   FC+  IN    T+ E
Subject   2911  LEKPVPQLEEGWYKVVVPDCKASRDYVRVLSRDVEQFSLVLERQEELARKLAEDSYDIEKTLDRVQWRELLSFDCKVLGKRPVIEVMEDQAVFESFLEFEPDEDMATKFNKAARFQEYCGNLSFNGMPITKEELVDLMSDGEVSVEAIEFTGDIYYQRLVPEFIANRAVTFCRAAINGNYLTVKE  3465

Penicillium chrysogenum virus segment 1, complete genome

Sequence ID: Length: 3562 Number of Matches: 1

Range 1: 2881 to 3411 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
145.9 bits(312) 0.0 60/177(34%) 0/177(0%) Plus/Plus
Query        3  LTEVIPEFIPTSERRIVPGFKSSLDYVKHLELDFNKRGLSLVRAGELAERMAEDNFNFNETADHQKWVEIMNKVYVIKEVRLVIEHRDDMVCFSEMLKADEDALNNPMYGVAAKYSEYWNHIELNGRKLTKDELIGVVTYLMVNPEVLEFKGNLYYRRLLPEFLAYKITYFCKDKIN  533
                L E +PE      + +VP +K+S DYV  L  D  K  L +    +LA +++ED+++  ++ DH++W  ++N    +    L +E  +D V F   L+ + +      + +A++Y E+ +++ LNGR +TK+EL+ +++   V  E +EF+G++YY RL+PEF+AY+ T FCK+ IN
Subject   2881  LEEKVPEINEEWYKVVVPDYKASRDYVNVLARDVEKFSLVIEEREKLARKLSEDSYDIEKSVDHERWKHLLNFRTRVIAKELAVEPMEDSVVFEGFLEYEVEEGTEKKFDLASRYQEFVSYLSLNGRAITKEELLDLMSDGEVCLEAIEFQGDIYYARLVPEFIAYRATMFCKEAIN  3411

Helminthosporium victoriae 145S virus

Sequence ID: Length: 3612 Number of Matches: 2

Range 1: 3280 to 3369 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.8 bits(85) 0.0 16/30(53%) 0/30(0%) Plus/Plus
Query      432  NPEVLEFKGNLYYRRLLPEFLAYKITYFCK  521
                N +VL+FKG++YYRRL+ E     +T FCK
Subject   3280  NMDVLDFKGDVYYRRLVGEPFGRLVTNFCK  3369

Range 2: 2908 to 3099 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.1 bits(68) 0.0 18/64(28%) 0/64(0%) Plus/Plus
Query       51  VPGFKSSLDYVKHLELDFNKRGLSLVRAGELAERMAEDNFNFNETADHQKWVEIMNKVYVIKEV  242
                VPG  +++DYV  L+ +     +S+ +   +AE+MAE  F+  +    +  +E    V   K V
Subject   2908  VPGKLAAMDYVAVLDRELRSNNISIEKWEMVAEKMAEGAFDVYKDGAFEVLLEYKGNVVEKKPV  3099