This html page seems to have been stripped by Galaxy.
Disable Galaxy's html sanitization feature to view the full page (see sanitize_all_html in your galaxy's universe_wsgi.ini), or download this page instead of viewing it in Galaxy.

Queries

Nucleotide Sequence (381 letters)

Query ID:ds2016-58_48
Query definition:No definition line
Query length:589
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 10 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
39
78
117
156
195
234
273
312
351
381

Descriptions

Alignments

Grapevine leafroll associated virus 2, complete genome

Sequence ID: DQ286725.2 Length: 16535 Number of Matches: 8

Range 1: 13239 to 13616 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
303.5 bits(656) 0.0 125/126(99%) 0/126(0%) Plus/Plus
Query        2  ILRFVESYTADPAIDALEEELDAIMKLDNPHLSTAQLWVGFFCYYGEFRTAQHRVVPRPDVYKTPESVGGFEINMKNVERFFDKLQRELPSVSLRRQFNGARAYEAFKVFKGGNISFKPISRLNIP  379
                ILRFVESYTADPAIDALEE+LDAIMKLDNPHLSTAQLWVGFFCYYGEFRTAQHRVVPRPDVYKTPESVGGFEINMKNVERFFDKLQRELPSVSLRRQFNGARAYEAFKVFKGGNISFKPISRLNIP
Subject  13239  ILRFVESYTADPAIDALEEKLDAIMKLDNPHLSTAQLWVGFFCYYGEFRTAQHRVVPRPDVYKTPESVGGFEINMKNVERFFDKLQRELPSVSLRRQFNGARAYEAFKVFKGGNISFKPISRLNIP  13616

Range 2: 13239 to 13616 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
296.6 bits(641) 0.0 126/126(100%) 0/126(0%) Minus/Minus
Query        2  WYV*SRDGFKADIPAFKYFESLISSSAVELPP*RNAR*LSLKLIKKSFNILHVYFKTTNRLGCFIYVRPRNHTMLCSAKFTVVTEKTYPQLRRREMRIV*LHYSIQFFF*RINSWVSRVRFHESQD  379
                WYV*SRDGFKADIPAFKYFESLISSSAVELPP*RNAR*LSLKLIKKSFNILHVYFKTTNRLGCFIYVRPRNHTMLCSAKFTVVTEKTYPQLRRREMRIV*LHYSIQFFF*RINSWVSRVRFHESQD
Subject  13239  WYV*SRDGFKADIPAFKYFESLISSSAVELPP*RNAR*LSLKLIKKSFNILHVYFKTTNRLGCFIYVRPRNHTMLCSAKFTVVTEKTYPQLRRREMRIV*LHYSIQFFF*RINSWVSRVRFHESQD  13616

Range 3: 13240 to 13617 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
291.6 bits(630) 0.0 125/126(99%) 0/126(0%) Minus/Minus
Query        3  LVCLIERWV*S*YSRL*IL*KPHKL*RR*IAAVKKRSVTLVEAYQKIFQHSSCLFQNHQPTRVFYIRPASEPHDVVQCEIHRSNRKNLPTTAPSRDEDCLTSL*HPILLLTHQ*LGQPCTIPRISG  380
                LVCLIERWV*S*YSRL*IL*KPHKL*RR*IAAVKKRSVTLVEAYQKIFQHSSCLFQNHQPTRVFYIRPASEPHDVVQCEIHRSNRKNLPTTAPSRDEDCLTSL*HPI LLTHQ*LGQPCTIPRISG
Subject  13240  LVCLIERWV*S*YSRL*IL*KPHKL*RR*IAAVKKRSVTLVEAYQKIFQHSSCLFQNHQPTRVFYIRPASEPHDVVQCEIHRSNRKNLPTTAPSRDEDCLTSL*HPIFLLTHQ*LGQPCTIPRISG  13617

Range 4: 13238 to 13618 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
289.3 bits(625) 0.0 126/127(99%) 0/127(0%) Plus/Plus
Query        1  HPEIRGIVHG*PSY*CVRRRIGCYNEVRQSSSLDGAVVGRFFLLLR*ISHCTTSCGSEAGRI*NTRVGWWF*NKHEEC*KIF**ASTRVTERFFTAAIQRR*SL*GFQSI*RREYQL*THLSIKHTK  381
                HPEIRGIVHG*PSY*CVRR+IGCYNEVRQSSSLDGAVVGRFFLLLR*ISHCTTSCGSEAGRI*NTRVGWWF*NKHEEC*KIF**ASTRVTERFFTAAIQRR*SL*GFQSI*RREYQL*THLSIKHTK
Subject  13238  HPEIRGIVHG*PSY*CVRRKIGCYNEVRQSSSLDGAVVGRFFLLLR*ISHCTTSCGSEAGRI*NTRVGWWF*NKHEEC*KIF**ASTRVTERFFTAAIQRR*SL*GFQSI*RREYQL*THLSIKHTK  13618

Range 5: 13348 to 13617 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
207.7 bits(447) 0.0 90/90(100%) 0/90(0%) Plus/Plus
Query      111  CG*VFSVTTVNFALHNIVWFRGRTYIKHPSRLVVLK*T*RMLKDFLISFNESYRAFLYGGNSTALELMRLSKYLKAGISALNPSLD*TYQ  380
                CG*VFSVTTVNFALHNIVWFRGRTYIKHPSRLVVLK*T*RMLKDFLISFNESYRAFLYGGNSTALELMRLSKYLKAGISALNPSLD*TYQ
Subject  13348  CG*VFSVTTVNFALHNIVWFRGRTYIKHPSRLVVLK*T*RMLKDFLISFNESYRAFLYGGNSTALELMRLSKYLKAGISALNPSLD*TYQ  13617

Range 6: 13240 to 13311 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.5 bits(117) 0.0 24/24(100%) 0/24(0%) Plus/Plus
Query        3  S*DSWNRTRLTQLLMR*KKNWML*  74
                S*DSWNRTRLTQLLMR*KKNWML*
Subject  13240  S*DSWNRTRLTQLLMR*KKNWML*  13311

Range 7: 13322 to 13618 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
231.1 bits(498) 0.0 99/99(100%) 0/99(0%) Minus/Minus
Query       85  LGMFNREMGLKLIFPPLNTLKAS*ALAPLNCRRKETLGNSR*SLSKNLSTFFMFISKPPTDSGVLYTSGLGTTRCCAVRNSP**QKKPTHNCAVER*GL  381
                LGMFNREMGLKLIFPPLNTLKAS*ALAPLNCRRKETLGNSR*SLSKNLSTFFMFISKPPTDSGVLYTSGLGTTRCCAVRNSP**QKKPTHNCAVER*GL
Subject  13322  LGMFNREMGLKLIFPPLNTLKAS*ALAPLNCRRKETLGNSR*SLSKNLSTFFMFISKPPTDSGVLYTSGLGTTRCCAVRNSP**QKKPTHNCAVER*GL  13618

Range 8: 13238 to 13264 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.0 bits(46) 0.0 9/9(100%) 0/9(0%) Minus/Minus
Query        1  VYDSTNLRM  27
                VYDSTNLRM
Subject  13238  VYDSTNLRM  13264

Grapevine rootstock stem lesion associated virus, complete genome

Sequence ID: NC_004724.1 Length: 16527 Number of Matches: 6

Range 1: 13226 to 13603 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
272.8 bits(589) 0.0 112/126(89%) 0/126(0%) Plus/Plus
Query        2  ILRFVESYTADPAIDALEEELDAIMKLDNPHLSTAQLWVGFFCYYGEFRTAQHRVVPRPDVYKTPESVGGFEINMKNVERFFDKLQRELPSVSLRRQFNGARAYEAFKVFKGGNISFKPISRLNIP  379
                +LRFVESYTADPAIDALEE+LDAIMK  NPHLSTAQLWVGFFCYYGEFRTAQ RVV RP VYKTP SVGGFEINMKNVE FFDK+QRE+P+VSLRRQFNGARA+EAFKVFK GNISFKPISRLNIP
Subject  13226  VLRFVESYTADPAIDALEEKLDAIMKKSNPHLSTAQLWVGFFCYYGEFRTAQRRVVQRPGVYKTPNSVGGFEINMKNVEEFFDKIQREVPNVSLRRQFNGARAHEAFKVFKKGNISFKPISRLNIP  13603

Range 2: 13309 to 13605 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
176.6 bits(379) 0.0 77/99(78%) 0/99(0%) Minus/Minus
Query       85  LGMFNREMGLKLIFPPLNTLKAS*ALAPLNCRRKETLGNSR*SLSKNLSTFFMFISKPPTDSGVLYTSGLGTTRCCAVRNSP**QKKPTHNCAVER*GL  381
                LGMFNR+MGLKL+FP LNTL AS ALAPLNCRR++T G SR  LSKN STFF+ ISKPPT+ GVLYT GL TTR CAVRNSP**QK PTH+CAV+R*GL
Subject  13309  LGMFNRDMGLKLMFPFLNTLNASCALAPLNCRRRDTFGTSRWILSKNSSTFFILISKPPTELGVLYTPGLCTTRRCAVRNSP**QKNPTHSCAVDR*GL  13605

Range 3: 13226 to 13600 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
162.8 bits(349) 0.0 70/125(56%) 0/125(0%) Minus/Minus
Query        2  YV*SRDGFKADIPAFKYFESLISSSAVELPP*RNAR*LSLKLIKKSFNILHVYFKTTNRLGCFIYVRPRNHTMLCSAKFTVVTEKTYPQLRRREMRIV*LHYSIQFFF*RINSWVSRVRFHESQD  376
                YV* R GF+AD+  FKYFE L+ S +VEL P*R+   LSL LIKK F++ H+  +T++R+G  I+ RP +H  LC AKF V+ E++YPQLRRR MRI  LHYS+QF F R+NS +S V F +SQD
Subject  13226  YV*PRYGFEADVSLFKYFERLVRSGSVELSP*RHVWHLSLDLIKKLFDVFHINLETSDRIGRLIHTRPLHHPTLCGAKFAVIAEESYPQLRRR*MRITLLHYSVQFLFQRVNSRISSV*FDKSQD  13600

Range 4: 13228 to 13605 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.4 bits(252) 0.0 65/126(52%) 0/126(0%) Plus/Plus
Query        4  PEIRGIVHG*PSY*CVRRRIGCYNEVRQSSSLDGAVVGRFFLLLR*ISHCTTSCGSEAGRI*NTRVGWWF*NKHEEC*KIF**ASTRVTERFFTAAIQRR*SL*GFQSI*RREYQL*THLSIKHTK  381
                PEI  I+H *  Y* V R IG YNE   SSS+ GA VGR  LLLR ISH TTS G++AG +*+ + G  F + +E+  ++F**  TR  +R  TA IQR  S  G QSI*+ ++QL TH+S+KHT+
Subject  13228  PEICRIIHC*SGY*RVGREIGRYNEEE*SSSIYGATVGRILLLLRRISHRTTSGGAKAGCV*DAQFGRRFRD*YEKRRRVF**DPTRGAKRVSTATIQRSQSARGVQSI*KGKHQLQTHISVKHTE  13605

Range 5: 13227 to 13601 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
114.2 bits(243) 0.0 64/125(51%) 0/125(0%) Minus/Minus
Query        3  VCLIERWV*S*YSRL*IL*KPHKL*RR*IAAVKKRSVTLVEAYQKIFQHSSCLFQNHQPTRVFYIRPASEPHDVVQCEIHRSNRKNLPTTAPSRDEDCLTSL*HPILLLTHQ*LGQPCTIPRISG  377
                VCL E WV*S*    *IL* P  L  R*I AV+ R   LV +YQK  +  S   +N +P    Y  PA  P DVV+CEI R++R+ LPT AP  DED  +SL* PI L T Q*  Q C I +ISG
Subject  13227  VCLTEIWV*S*CFPF*IL*TPRALWLR*IVAVETRLAPLVGSYQKTLRRFSY*SRNLRPNWASYTHPAFAPPDVVRCEIRRNSRRILPTVAP*IDEDYSSSL*RPISLPTRQ*PDQQCMIRQISG  13601

Range 6: 13227 to 13604 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.9 bits(227) 0.0 65/126(52%) 0/126(0%) Plus/Plus
Query        3  S*DSWNRTRLTQLLMR*KKNWML*XXXXXXXXXXXXCG*VFSVTTVNFALHNIVWFRGRTYIKHPSRLVVLK*T*RMLKDFLISFNESYRAFLYGGNSTALELMRLSKYLKAGISALNPSLD*TYQ  380
                S*D  N T L +LL R K+NW L**   ILI  RR+CG*  S  T NFA HN+ W +GR  I+ P R  V +  *+  K FLI  NE  +  LYG NST  E  R SKYLK   SA NP L *TY+
Subject  13227  S*DLSNHTLLIRLLTRWKRNWTL**RRVILIYLRRNCG*DSSAITANFAPHNVGWCKGRVCIRRPIRSEVSRLI*KTSKSFLIRSNERCQTCLYGDNSTEPERTRRSKYLKRETSASNPYLG*TYR  13604

Grapevine leafroll associated virus 2 isolate GLV2 1050 02 polyprotein (ORF1a), RNA dependent RNA polymerase (ORF1b), 6.3 kDa small hydrophobic protein (ORF2), putative heat shock protein 70 (ORF3), 63 kDa putative cell to cell movemennt protein (ORF4), minor capsid protein (CPm), major capsid protein (CP), 19 kDa protein (ORF7), and 24 kDa protein (ORF8) genes, complete cds

Sequence ID: JX513891.1 Length: 16489 Number of Matches: 6

Range 1: 13214 to 13591 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
272.8 bits(589) 0.0 112/126(89%) 0/126(0%) Plus/Plus
Query        2  ILRFVESYTADPAIDALEEELDAIMKLDNPHLSTAQLWVGFFCYYGEFRTAQHRVVPRPDVYKTPESVGGFEINMKNVERFFDKLQRELPSVSLRRQFNGARAYEAFKVFKGGNISFKPISRLNIP  379
                +LRFVESYTADPAIDALEE+LDAIMK  NPHLSTAQLWVGFFCYYGEFRTAQ RVV RP VYKTP SVGGFEINMKNVE FFDK+QRE+P+VSLRRQFNGARA+EAFKVFK GNISFKPISRLNIP
Subject  13214  VLRFVESYTADPAIDALEEKLDAIMKKSNPHLSTAQLWVGFFCYYGEFRTAQRRVVQRPGVYKTPNSVGGFEINMKNVEEFFDKIQREVPNVSLRRQFNGARAHEAFKVFKKGNISFKPISRLNIP  13591

Range 2: 13297 to 13593 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
176.6 bits(379) 0.0 77/99(78%) 0/99(0%) Minus/Minus
Query       85  LGMFNREMGLKLIFPPLNTLKAS*ALAPLNCRRKETLGNSR*SLSKNLSTFFMFISKPPTDSGVLYTSGLGTTRCCAVRNSP**QKKPTHNCAVER*GL  381
                LGMFNR+MGLKL+FP LNTL AS ALAPLNCRR++T G SR  LSKN STFF+ ISKPPT+ GVLYT GL TTR CAVRNSP**QK PTH+CAV+R*GL
Subject  13297  LGMFNRDMGLKLMFPFLNTLNASCALAPLNCRRRDTFGTSRWILSKNSSTFFILISKPPTELGVLYTPGLCTTRRCAVRNSP**QKNPTHSCAVDR*GL  13593

Range 3: 13214 to 13588 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
160.5 bits(344) 0.0 69/125(55%) 0/125(0%) Minus/Minus
Query        2  YV*SRDGFKADIPAFKYFESLISSSAVELPP*RNAR*LSLKLIKKSFNILHVYFKTTNRLGCFIYVRPRNHTMLCSAKFTVVTEKTYPQLRRREMRIV*LHYSIQFFF*RINSWVSRVRFHESQD  376
                YV* R GF+AD+  FKYFE L+ S +VEL P R+   LSL LIKK F++ H+  +T++R+G  I+ RP +H  LC AKF V+ E++YPQLRRR MRI  LHYS+QF F R+NS +S V F +SQD
Subject  13214  YV*PRYGFEADVSLFKYFECLVRSGSVELSPQRHVWHLSLDLIKKLFDVFHINLETSDRIGRLIHTRPLHHPTLCGAKFAVIAEESYPQLRRR*MRITLLHYSVQFLFQRVNSRISSV*FDKSQD  13588

Range 4: 13216 to 13593 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
116.5 bits(248) 0.0 64/126(51%) 0/126(0%) Plus/Plus
Query        4  PEIRGIVHG*PSY*CVRRRIGCYNEVRQSSSLDGAVVGRFFLLLR*ISHCTTSCGSEAGRI*NTRVGWWF*NKHEEC*KIF**ASTRVTERFFTAAIQRR*SL*GFQSI*RREYQL*THLSIKHTK  381
                PEI  I+H *  Y* V R IG YNE   SSS+ GA VGR  LLLR ISH TTS G++AG +*+ + G  F + +E+  ++F**  TR  +R   A IQR  S  G QSI*+ ++QL TH+S+KHT+
Subject  13216  PEICRIIHC*SGY*RVGREIGRYNEEE*SSSIYGATVGRILLLLRRISHRTTSGGAKAGCV*DAQFGRRFRD*YEKRRRVF**DPTRGAKRVSAATIQRSQSARGIQSI*KGKHQLQTHISVKHTE  13593

Range 5: 13215 to 13589 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.4 bits(239) 0.0 63/125(50%) 0/125(0%) Minus/Minus
Query        3  VCLIERWV*S*YSRL*IL*KPHKL*RR*IAAVKKRSVTLVEAYQKIFQHSSCLFQNHQPTRVFYIRPASEPHDVVQCEIHRSNRKNLPTTAPSRDEDCLTSL*HPILLLTHQ*LGQPCTIPRISG  377
                VCL E WV*S*    *IL* P  L  R*I A + R   LV +YQK  +  S   +N +P    Y  PA  P DVV+CEI R++R+ LPT AP  DED  +SL* PI L T Q*  Q C I +ISG
Subject  13215  VCLTEIWV*S*CFPF*IL*MPRALWLR*IVAAETRLAPLVGSYQKTLRRFSY*SRNLRPNWASYTHPAFAPPDVVRCEIRRNSRRILPTVAP*IDEDYSSSL*RPISLPTRQ*PDQQCMIRQISG  13589

Range 6: 13215 to 13592 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
102.3 bits(217) 0.0 64/126(51%) 0/126(0%) Plus/Plus
Query        3  S*DSWNRTRLTQLLMR*KKNWML*XXXXXXXXXXXXCG*VFSVTTVNFALHNIVWFRGRTYIKHPSRLVVLK*T*RMLKDFLISFNESYRAFLYGGNSTALELMRLSKYLKAGISALNPSLD*TYQ  380
                S*D  N T L +LL R K+NW L**   ILI  RR+CG*  S  T NFA HN+ W +GR  I+ P R  V +  *+  K FLI  NE  +  L G NST  E  R SKYLK   SA NP L *TY+
Subject  13215  S*DLSNHTLLIRLLTRWKRNWTL**RRVILIYLRRNCG*DSSAITANFAPHNVGWCKGRVCIRRPIRSEVSRLI*KTSKSFLIRSNERCQTCLCGDNSTEPERTRHSKYLKRETSASNPYLG*TYR  13592

Grapevine rootstock stem lesion associated virus methyltransferase/helicase polyprotein, RNA dependent RNA polymerase, p6, HSP70 like protein, HSP90 like protein, coat protein duplicate, coat protein, p19, and p24 genes, complete cds

Sequence ID: AF314061.1 Length: 16527 Number of Matches: 6

Range 1: 13226 to 13603 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
272.8 bits(589) 0.0 112/126(89%) 0/126(0%) Plus/Plus
Query        2  ILRFVESYTADPAIDALEEELDAIMKLDNPHLSTAQLWVGFFCYYGEFRTAQHRVVPRPDVYKTPESVGGFEINMKNVERFFDKLQRELPSVSLRRQFNGARAYEAFKVFKGGNISFKPISRLNIP  379
                +LRFVESYTADPAIDALEE+LDAIMK  NPHLSTAQLWVGFFCYYGEFRTAQ RVV RP VYKTP SVGGFEINMKNVE FFDK+QRE+P+VSLRRQFNGARA+EAFKVFK GNISFKPISRLNIP
Subject  13226  VLRFVESYTADPAIDALEEKLDAIMKKSNPHLSTAQLWVGFFCYYGEFRTAQRRVVQRPGVYKTPNSVGGFEINMKNVEEFFDKIQREVPNVSLRRQFNGARAHEAFKVFKKGNISFKPISRLNIP  13603

Range 2: 13309 to 13605 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
176.6 bits(379) 0.0 77/99(78%) 0/99(0%) Minus/Minus
Query       85  LGMFNREMGLKLIFPPLNTLKAS*ALAPLNCRRKETLGNSR*SLSKNLSTFFMFISKPPTDSGVLYTSGLGTTRCCAVRNSP**QKKPTHNCAVER*GL  381
                LGMFNR+MGLKL+FP LNTL AS ALAPLNCRR++T G SR  LSKN STFF+ ISKPPT+ GVLYT GL TTR CAVRNSP**QK PTH+CAV+R*GL
Subject  13309  LGMFNRDMGLKLMFPFLNTLNASCALAPLNCRRRDTFGTSRWILSKNSSTFFILISKPPTELGVLYTPGLCTTRRCAVRNSP**QKNPTHSCAVDR*GL  13605

Range 3: 13226 to 13600 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
162.8 bits(349) 0.0 70/125(56%) 0/125(0%) Minus/Minus
Query        2  YV*SRDGFKADIPAFKYFESLISSSAVELPP*RNAR*LSLKLIKKSFNILHVYFKTTNRLGCFIYVRPRNHTMLCSAKFTVVTEKTYPQLRRREMRIV*LHYSIQFFF*RINSWVSRVRFHESQD  376
                YV* R GF+AD+  FKYFE L+ S +VEL P*R+   LSL LIKK F++ H+  +T++R+G  I+ RP +H  LC AKF V+ E++YPQLRRR MRI  LHYS+QF F R+NS +S V F +SQD
Subject  13226  YV*PRYGFEADVSLFKYFERLVRSGSVELSP*RHVWHLSLDLIKKLFDVFHINLETSDRIGRLIHTRPLHHPTLCGAKFAVIAEESYPQLRRR*MRITLLHYSVQFLFQRVNSRISSV*FDKSQD  13600

Range 4: 13228 to 13605 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.4 bits(252) 0.0 65/126(52%) 0/126(0%) Plus/Plus
Query        4  PEIRGIVHG*PSY*CVRRRIGCYNEVRQSSSLDGAVVGRFFLLLR*ISHCTTSCGSEAGRI*NTRVGWWF*NKHEEC*KIF**ASTRVTERFFTAAIQRR*SL*GFQSI*RREYQL*THLSIKHTK  381
                PEI  I+H *  Y* V R IG YNE   SSS+ GA VGR  LLLR ISH TTS G++AG +*+ + G  F + +E+  ++F**  TR  +R  TA IQR  S  G QSI*+ ++QL TH+S+KHT+
Subject  13228  PEICRIIHC*SGY*RVGREIGRYNEEE*SSSIYGATVGRILLLLRRISHRTTSGGAKAGCV*DAQFGRRFRD*YEKRRRVF**DPTRGAKRVSTATIQRSQSARGVQSI*KGKHQLQTHISVKHTE  13605

Range 5: 13227 to 13601 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
114.2 bits(243) 0.0 64/125(51%) 0/125(0%) Minus/Minus
Query        3  VCLIERWV*S*YSRL*IL*KPHKL*RR*IAAVKKRSVTLVEAYQKIFQHSSCLFQNHQPTRVFYIRPASEPHDVVQCEIHRSNRKNLPTTAPSRDEDCLTSL*HPILLLTHQ*LGQPCTIPRISG  377
                VCL E WV*S*    *IL* P  L  R*I AV+ R   LV +YQK  +  S   +N +P    Y  PA  P DVV+CEI R++R+ LPT AP  DED  +SL* PI L T Q*  Q C I +ISG
Subject  13227  VCLTEIWV*S*CFPF*IL*TPRALWLR*IVAVETRLAPLVGSYQKTLRRFSY*SRNLRPNWASYTHPAFAPPDVVRCEIRRNSRRILPTVAP*IDEDYSSSL*RPISLPTRQ*PDQQCMIRQISG  13601

Range 6: 13227 to 13604 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.9 bits(227) 0.0 65/126(52%) 0/126(0%) Plus/Plus
Query        3  S*DSWNRTRLTQLLMR*KKNWML*XXXXXXXXXXXXCG*VFSVTTVNFALHNIVWFRGRTYIKHPSRLVVLK*T*RMLKDFLISFNESYRAFLYGGNSTALELMRLSKYLKAGISALNPSLD*TYQ  380
                S*D  N T L +LL R K+NW L**   ILI  RR+CG*  S  T NFA HN+ W +GR  I+ P R  V +  *+  K FLI  NE  +  LYG NST  E  R SKYLK   SA NP L *TY+
Subject  13227  S*DLSNHTLLIRLLTRWKRNWTL**RRVILIYLRRNCG*DSSAITANFAPHNVGWCKGRVCIRRPIRSEVSRLI*KTSKSFLIRSNERCQTCLYGDNSTEPERTRRSKYLKRETSASNPYLG*TYR  13604

Grapevine leafroll associated virus 2 isolate 93/955, complete genome

Sequence ID: AY881628.1 Length: 16494 Number of Matches: 7

Range 1: 13218 to 13595 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
267.7 bits(578) 0.0 107/126(85%) 0/126(0%) Plus/Plus
Query        2  ILRFVESYTADPAIDALEEELDAIMKLDNPHLSTAQLWVGFFCYYGEFRTAQHRVVPRPDVYKTPESVGGFEINMKNVERFFDKLQRELPSVSLRRQFNGARAYEAFKVFKGGNISFKPISRLNIP  379
                ILR+VESYT+DPAIDALE++L+AI+K  NPHLSTAQLWVGFFCYYGEFRTAQ RVV RP VYKTP+SVGGFEINMK+VE+FFDKLQRELP+VSLRRQFNGARA+EAFK+FK GNISFKPISRLN+P
Subject  13218  ILRYVESYTSDPAIDALEDKLEAILKTSNPHLSTAQLWVGFFCYYGEFRTAQSRVVQRPGVYKTPDSVGGFEINMKDVEKFFDKLQRELPNVSLRRQFNGARAHEAFKIFKNGNISFKPISRLNVP  13595

Range 2: 13301 to 13597 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
166.5 bits(357) 0.0 77/99(78%) 0/99(0%) Minus/Minus
Query       85  LGMFNREMGLKLIFPPLNTLKAS*ALAPLNCRRKETLGNSR*SLSKNLSTFFMFISKPPTDSGVLYTSGLGTTRCCAVRNSP**QKKPTHNCAVER*GL  381
                LG F R+MGLKL+FP LN LKAS ALAPLN RRK+TLGNS *SLSKN ST FMFIS PPT+SGVLYT GL TT   AVRNSP**QK PTH+CAV+R*GL
Subject  13301  LGTFKRDMGLKLMFPFLNILKASCALAPLN*RRKDTLGNSL*SLSKNFSTSFMFISNPPTESGVLYTPGLCTTLL*AVRNSP**QKNPTHSCAVDR*GL  13597

Range 3: 13224 to 13592 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
113.8 bits(242) 0.0 52/123(42%) 0/123(0%) Minus/Minus
Query        8  YV*SRDGFKADIPAFKYFESLISSSAVELPP*RNAR*LSLKLIKKSFNILHVYFKTTNRLGCFIYVRPRNHTMLCSAKFTVVTEKTYPQLRRREMRIV*LHYSIQFFF*RINSWVSRVRFHES  376
                ++ +R GF+  +   KYFESL+ S +V+L   R     SLK I++  +I HVYF++T+ + CFI+  P +++ L  AKF +VT+++ P LR R MRI    Y  QF F R++SW+ RVRF+ S
Subject  13224  HIQTRYGFETYVSVLKYFESLMRSGSVKLTSQRYIGQFSLKFIEELLDIFHVYFESTH*VWCFIHTWPLHYSTLSRAKFAIVTKESNP*LRCR*MRIASFQYRFQFVFQRVDSWI*RVRFYVS  13592

Range 4: 13217 to 13588 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.7 bits(196) 0.0 50/124(40%) 0/124(0%) Plus/Plus
Query        1  HPEIRGIVHG*PSY*CVRRRIGCYNEVRQSSSLDGAVVGRFFLLLR*ISHCTTSCGSEAGRI*NTRVGWWF*NKHEEC*KIF**ASTRVTERFFTAAIQRR*SL*GFQSI*RREYQL*THLSIK  372
                H +IR I+H   SY  V R+ G   E  QSSS+D A +G   LLL  ISH +    ++A  +*NTR+  W  NKHE C ++  * S R+ +  F  ++ R  S *GFQ+I* R+++  TH++ +
Subject  13217  HFKIRRILHVRSSYRRVGRQTGSDTEN*QSSSIDSATMGWILLLLWRISHGSK*SSAKARCV*NTRLSGWIRNKHERCREVLR*TSERIAQCIFATSV*RSQSA*GFQNI*ERKHKFQTHIAFE  13588

Range 5: 13402 to 13575 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.8 bits(98) 0.0 26/58(45%) 0/58(0%) Minus/Minus
Query      186  WV*S*YSRL*IL*KPHKL*RR*IAAVKKRSVTLVEAYQKIFQHSSCLFQNHQPTRVFY  359
                WV*+   R *I *KPH L  R*    K     L E Y++  +H SCLF+ H  + VFY
Subject  13402  WV*NLCFRS*IF*KPHALWLR*TDVAKIHWAILSEVYRRTSRHLSCLFRIHPLSLVFY  13575

Range 6: 13225 to 13365 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
43.2 bits(88) 0.0 22/47(47%) 0/47(0%) Minus/Minus
Query        9  CEIHRSNRKNLPTTAPSRDEDCLTSL*HPILLLTHQ*LGQPCTIPRI  149
                CEI  SN++  P  A S DEDC  S+  P+ L T +*L   C I RI
Subject  13225  CEIRHSNKRIQPIVALSIDEDC*FSVSLPVCLPTRR*LDLTCKILRI  13365

Range 7: 13345 to 13575 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.9 bits(107) 0.0 30/77(39%) 0/77(0%) Plus/Plus
Query      129  VTTVNFALHNIVWFRGRTYIKHPSRLVVLK*T*RMLKDFLISFNESYRAFLYGGNSTALELMRLSKYLKAGISALNP  359
                VT  NFA   +   +G+  IKH ++ V  K*T*+M +   I+F E+   +L   + T  E MRLSKYL+      NP
Subject  13345  VTMANFARLKVE*CKGQVCIKHQTQWVDSK*T*KMSRSSSINFRENCPMYLCDVSLTEPERMRLSKYLRTET*VSNP  13575

Nucleotide Sequence (314 letters)

Query ID:ds2016-58_48
Query definition:No definition line
Query length:589
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 10 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
32
64
96
128
160
192
224
256
288
314

Descriptions

Alignments

Grapevine leafroll associated virus 2, complete genome

Sequence ID: DQ286725.2 Length: 16535 Number of Matches: 6

Range 1: 11014 to 11325 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
254.0 bits(548) 0.0 101/104(97%) 0/104(0%) Minus/Plus
Query        1  FGARQLR*RAKEFHRPMRFFEWLPMRVYGQRTISSSFISLQFNQ*EISESGGIRFWWWNF*RVHHFLPQQHVCGARFRGRPESGRKRCGQSFFKPPFFSYFIRT  312
                FGARQLR*RAKEFHRPMRFFEWL MRVYGQRTISSS ISLQFNQ*EISESGGIRFWWWNF*RVHHFLPQQHVCGARFRGRPESGRKRCGQS FKPPFFSYFIRT
Subject  11014  FGARQLR*RAKEFHRPMRFFEWLSMRVYGQRTISSSVISLQFNQ*EISESGGIRFWWWNF*RVHHFLPQQHVCGARFRGRPESGRKRCGQSLFKPPFFSYFIRT  11325

Range 2: 11012 to 11323 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
247.1 bits(533) 0.0 103/104(99%) 0/104(0%) Minus/Plus
Query        3  CSVPANYDSVQRNFTDQCVSLSGYQCVYMDNEPSAAALSACNLINKRSANLAVYDFGGGTFDVSIISYRNNTFVVRASGGDLNLGGRDVDRAFLNHLFSLTSLE  314
                CSVPANYDSVQRNFTDQCVSLSGYQCVYM NEPSAAALSACNLINKRSANLAVYDFGGGTFDVSIISYRNNTFVVRASGGDLNLGGRDVDRAFLNHLFSLTSLE
Subject  11012  CSVPANYDSVQRNFTDQCVSLSGYQCVYMVNEPSAAALSACNLINKRSANLAVYDFGGGTFDVSIISYRNNTFVVRASGGDLNLGGRDVDRAFLNHLFSLTSLE  11323

Range 3: 11014 to 11325 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
235.7 bits(508) 0.0 101/104(97%) 0/104(0%) Plus/Minus
Query        1  GSNEVREKRWFKKALSTSLPPRFRSPPEARTTNVLLR*EMMDTSKVPPPKSYTARFADLLLIKLQADKAAADGSLSIYTHW*PLKETHWSVKFLCTLS*LAGTE  312
                GSNEVREKRWFKKALSTSLPPRFRSPPEARTTNVLLR*EMMDTSKVPPPKSYTARFADLLLIKLQAD AAADGSL+IYTH *PLKETHWSVKFLCTLS*LAGTE
Subject  11014  GSNEVREKRWFKKALSTSLPPRFRSPPEARTTNVLLR*EMMDTSKVPPPKSYTARFADLLLIKLQADNAAADGSLTIYTH**PLKETHWSVKFLCTLS*LAGTE  11325

Range 4: 11013 to 11282 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
220.5 bits(475) 0.0 87/90(97%) 0/90(0%) Plus/Minus
Query       44  CPHLFRPDSGLPRKRAPQTCCCGKK*WTRQKFHHQNRIPPDSLISY*LNCKLIKLLLMVRCPYTRIGNHSKKRIGR*NSFARYRNWRAPN  313
                CPHLFRPDSGLPRKRAPQTCCCGKK*WTRQKFHHQNRIPPDSLISY*LNCKLI LLLMVR PYTRI NHSKKRIGR*NSFARYRNWRAPN
Subject  11013  CPHLFRPDSGLPRKRAPQTCCCGKK*WTRQKFHHQNRIPPDSLISY*LNCKLITLLLMVR*PYTRIDNHSKKRIGR*NSFARYRNWRAPN  11282

Range 5: 11013 to 11279 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
213.2 bits(459) 0.0 86/89(97%) 0/89(0%) Minus/Plus
Query       47  VRCPPITIACKGISPTNAFL*VVTNACIWTTNHQQQLYQLAI*SIRDQRIWRYTILVVELLTCPSFLTATTRLWCALPGET*IWAEEMW  313
                VRCPPITIACKGISPTNAFL*VV NACIW+TNHQQQ YQLAI*SIRDQRIWRYTILVVELLTCPSFLTATTRLWCALPGET*IWAEEMW
Subject  11013  VRCPPITIACKGISPTNAFL*VVINACIWSTNHQQQRYQLAI*SIRDQRIWRYTILVVELLTCPSFLTATTRLWCALPGET*IWAEEMW  11279

Range 6: 11012 to 11278 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
197.6 bits(425) 0.0 86/89(97%) 0/89(0%) Plus/Minus
Query       48  HISSAQIQVSPGSAHHKRVVAVRNDGHVKSSTTKIVYRQIR*SLID*IAS**SCC*WFVVHIHALVTTQRNALVGEIPLHAIVIGGHRT  314
                HISSAQIQVSPGSAHHKRVVAVRNDGHVKSSTTKIVYRQIR*SLID*IAS** CC*WFV HIHAL+TTQRNALVGEIPLHAIVIGGHRT
Subject  11012  HISSAQIQVSPGSAHHKRVVAVRNDGHVKSSTTKIVYRQIR*SLID*IAS**RCC*WFVDHIHALITTQRNALVGEIPLHAIVIGGHRT  11278

Grapevine leafroll associated virus 2 strain Alfie membrane associated protein P6 (P6) and Hsp70 like protein genes, complete cds

Sequence ID: AY456132.1 Length: 2466 Number of Matches: 6

Range 1: 841 to 1152 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
252.6 bits(545) 0.0 101/104(97%) 0/104(0%) Minus/Plus
Query        1  FGARQLR*RAKEFHRPMRFFEWLPMRVYGQRTISSSFISLQFNQ*EISESGGIRFWWWNF*RVHHFLPQQHVCGARFRGRPESGRKRCGQSFFKPPFFSYFIRT  312
                FGA QLR*RAKEFHRPM FFEWL MRVYGQRTISSSFISLQFNQ*EISESGGIRFWWWNF*RVHHFLPQQHVCGARFRGRPESGRKRCGQSFFKPPFFSYFIRT
Subject    841  FGACQLR*RAKEFHRPMCFFEWLSMRVYGQRTISSSFISLQFNQ*EISESGGIRFWWWNF*RVHHFLPQQHVCGARFRGRPESGRKRCGQSFFKPPFFSYFIRT  1152

Range 2: 839 to 1150 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
245.8 bits(530) 0.0 102/104(98%) 0/104(0%) Minus/Plus
Query        3  CSVPANYDSVQRNFTDQCVSLSGYQCVYMDNEPSAAALSACNLINKRSANLAVYDFGGGTFDVSIISYRNNTFVVRASGGDLNLGGRDVDRAFLNHLFSLTSLE  314
                CSVPANYDSVQRNFTDQCVSLSGYQCVYM NEPSAAALSACNLINK+SANLAVYDFGGGTFDVSIISYRNNTFVVRASGGDLNLGGRDVDRAFLNHLFSLTSLE
Subject    839  CSVPANYDSVQRNFTDQCVSLSGYQCVYMVNEPSAAALSACNLINKKSANLAVYDFGGGTFDVSIISYRNNTFVVRASGGDLNLGGRDVDRAFLNHLFSLTSLE  1150

Range 3: 841 to 1152 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
236.1 bits(509) 0.0 101/104(97%) 0/104(0%) Plus/Minus
Query        1  GSNEVREKRWFKKALSTSLPPRFRSPPEARTTNVLLR*EMMDTSKVPPPKSYTARFADLLLIKLQADKAAADGSLSIYTHW*PLKETHWSVKFLCTLS*LAGTE  312
                GSNEVREKRWFKKALSTSLPPRFRSPPEARTTNVLLR*EMMDTSKVPPPKSYTARFAD LLIKLQADKAAADGSL+IYTH *PLKETHWSVKFLCTLS*LAGTE
Subject    841  GSNEVREKRWFKKALSTSLPPRFRSPPEARTTNVLLR*EMMDTSKVPPPKSYTARFADFLLIKLQADKAAADGSLTIYTH**PLKETHWSVKFLCTLS*LAGTE  1152

Range 4: 840 to 1109 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
219.2 bits(472) 0.0 86/90(96%) 0/90(0%) Plus/Minus
Query       44  CPHLFRPDSGLPRKRAPQTCCCGKK*WTRQKFHHQNRIPPDSLISY*LNCKLIKLLLMVRCPYTRIGNHSKKRIGR*NSFARYRNWRAPN  313
                CPHLFRPDSGLPRKRAPQTCCCGKK*WTRQKFHHQNRIPPDSLISY*LNCKLIKLLLMVR PYTRI NHSKK IGR*NSFARYRNW+APN
Subject    840  CPHLFRPDSGLPRKRAPQTCCCGKK*WTRQKFHHQNRIPPDSLISY*LNCKLIKLLLMVR*PYTRIDNHSKKHIGR*NSFARYRNWQAPN  1109

Range 5: 840 to 1106 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
207.3 bits(446) 0.0 84/89(94%) 0/89(0%) Minus/Plus
Query       47  VRCPPITIACKGISPTNAFL*VVTNACIWTTNHQQQLYQLAI*SIRDQRIWRYTILVVELLTCPSFLTATTRLWCALPGET*IWAEEMW  313
                VRC PITIACKGISPTN FL*VV NACIW+TNHQQQLYQLAI*SIR+QRIWRYTILVVELLTCPSFLTATTRLWCALPGET*IWAEEMW
Subject    840  VRCLPITIACKGISPTNVFL*VVINACIWSTNHQQQLYQLAI*SIRNQRIWRYTILVVELLTCPSFLTATTRLWCALPGET*IWAEEMW  1106

Range 6: 839 to 1105 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
191.7 bits(412) 0.0 84/89(94%) 0/89(0%) Plus/Minus
Query       48  HISSAQIQVSPGSAHHKRVVAVRNDGHVKSSTTKIVYRQIR*SLID*IAS**SCC*WFVVHIHALVTTQRNALVGEIPLHAIVIGGHRT  314
                HISSAQIQVSPGSAHHKRVVAVRNDGHVKSSTTKIVYRQIR* LID*IAS**SCC*WFV HIHAL+TTQRN LVGEIPLHAIVIG HRT
Subject    839  HISSAQIQVSPGSAHHKRVVAVRNDGHVKSSTTKIVYRQIR*FLID*IAS**SCC*WFVDHIHALITTQRNTLVGEIPLHAIVIGRHRT  1105

Grapevine leafroll associated virus 2 isolate PV44 heat shock protein 70 gene, partial cds

Sequence ID: EF012719.1 Length: 828 Number of Matches: 6

Range 1: 450 to 761 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
252.2 bits(544) 0.0 101/104(97%) 0/104(0%) Minus/Plus
Query        1  FGARQLR*RAKEFHRPMRFFEWLPMRVYGQRTISSSFISLQFNQ*EISESGGIRFWWWNF*RVHHFLPQQHVCGARFRGRPESGRKRCGQSFFKPPFFSYFIRT  312
                FGARQLR*RAKEFHRPMRFFEWL MRVYGQRTISSSFISLQFN *EISESGGIRFWWWNF*RVHHFLPQQHVCGARFRGRPESGRKRC QSFFKPPFFSYFIRT
Subject    450  FGARQLR*RAKEFHRPMRFFEWLSMRVYGQRTISSSFISLQFN**EISESGGIRFWWWNF*RVHHFLPQQHVCGARFRGRPESGRKRCRQSFFKPPFFSYFIRT  761

Range 2: 448 to 759 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
247.1 bits(533) 0.0 103/104(99%) 0/104(0%) Minus/Plus
Query        3  CSVPANYDSVQRNFTDQCVSLSGYQCVYMDNEPSAAALSACNLINKRSANLAVYDFGGGTFDVSIISYRNNTFVVRASGGDLNLGGRDVDRAFLNHLFSLTSLE  314
                CSVPANYDSVQRNFTDQCVSLSGYQCVYM NEPSAAALSACNLINKRSANLAVYDFGGGTFDVSIISYRNNTFVVRASGGDLNLGGRDVDRAFLNHLFSLTSLE
Subject    448  CSVPANYDSVQRNFTDQCVSLSGYQCVYMVNEPSAAALSACNLINKRSANLAVYDFGGGTFDVSIISYRNNTFVVRASGGDLNLGGRDVDRAFLNHLFSLTSLE  759

Range 3: 450 to 761 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
238.0 bits(513) 0.0 102/104(98%) 0/104(0%) Plus/Minus
Query        1  GSNEVREKRWFKKALSTSLPPRFRSPPEARTTNVLLR*EMMDTSKVPPPKSYTARFADLLLIKLQADKAAADGSLSIYTHW*PLKETHWSVKFLCTLS*LAGTE  312
                GSNEVREKRWFKKALSTSLPPRFRSPPEARTTNVLLR*EMMDTSKVPPPKSYTARFADLLLIKLQADKAAADGSL+IYTH *PLKETHWSVKFLCTLS*LAGTE
Subject    450  GSNEVREKRWFKKALSTSLPPRFRSPPEARTTNVLLR*EMMDTSKVPPPKSYTARFADLLLIKLQADKAAADGSLTIYTH**PLKETHWSVKFLCTLS*LAGTE  761

Range 4: 449 to 718 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
218.7 bits(471) 0.0 87/90(97%) 0/90(0%) Plus/Minus
Query       44  CPHLFRPDSGLPRKRAPQTCCCGKK*WTRQKFHHQNRIPPDSLISY*LNCKLIKLLLMVRCPYTRIGNHSKKRIGR*NSFARYRNWRAPN  313
                C HLFRPDSGLPRKRAPQTCCCGKK*WTRQKFHHQNRIPPDSLISY*LNCKLIKLLLMVR PYTRI NHSKKRIGR*NSFARYRNWRAPN
Subject    449  CLHLFRPDSGLPRKRAPQTCCCGKK*WTRQKFHHQNRIPPDSLISY*LNCKLIKLLLMVR*PYTRIDNHSKKRIGR*NSFARYRNWRAPN  718

Range 5: 449 to 712 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
208.2 bits(448) 0.0 85/88(97%) 0/88(0%) Minus/Plus
Query       50  VRCPPITIACKGISPTNAFL*VVTNACIWTTNHQQQLYQLAI*SIRDQRIWRYTILVVELLTCPSFLTATTRLWCALPGET*IWAEEM  313
                VRCPPITIACKGISPTNAFL*VV NACIW+TNHQQQLYQLAI* IRDQRIWRYTILVVELLTCPSFLTATTRLWCALPGET*IWAEEM
Subject    449  VRCPPITIACKGISPTNAFL*VVINACIWSTNHQQQLYQLAI*LIRDQRIWRYTILVVELLTCPSFLTATTRLWCALPGET*IWAEEM  712

Range 6: 448 to 714 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.9 bits(419) 0.0 85/89(96%) 0/89(0%) Plus/Minus
Query       48  HISSAQIQVSPGSAHHKRVVAVRNDGHVKSSTTKIVYRQIR*SLID*IAS**SCC*WFVVHIHALVTTQRNALVGEIPLHAIVIGGHRT  314
                +ISSAQIQVSPGSAHHKRVVAVRNDGHVKSSTTKIVYRQIR*SLI+*IAS**SCC*WFV HIHAL+TTQRNALVGEIPLHAIVIGGHRT
Subject    448  YISSAQIQVSPGSAHHKRVVAVRNDGHVKSSTTKIVYRQIR*SLIN*IAS**SCC*WFVDHIHALITTQRNALVGEIPLHAIVIGGHRT  714

Grapevine leafroll associated virus 2 isolate GLV2 1050 02 polyprotein (ORF1a), RNA dependent RNA polymerase (ORF1b), 6.3 kDa small hydrophobic protein (ORF2), putative heat shock protein 70 (ORF3), 63 kDa putative cell to cell movemennt protein (ORF4), minor capsid protein (CPm), major capsid protein (CP), 19 kDa protein (ORF7), and 24 kDa protein (ORF8) genes, complete cds

Sequence ID: JX513891.1 Length: 16489 Number of Matches: 6

Range 1: 10987 to 11298 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
243.0 bits(524) 0.0 101/104(97%) 0/104(0%) Minus/Plus
Query        3  CSVPANYDSVQRNFTDQCVSLSGYQCVYMDNEPSAAALSACNLINKRSANLAVYDFGGGTFDVSIISYRNNTFVVRASGGDLNLGGRDVDRAFLNHLFSLTSLE  314
                CSVPANYDSVQRNFTDQCVSLSGYQCVYM NEPSAAALSACNLINK+SANLAVYDFGGGTFDVSIISYRNNTFVVRASGGDLNLGGRDVDRAFL HLFSLTSLE
Subject  10987  CSVPANYDSVQRNFTDQCVSLSGYQCVYMVNEPSAAALSACNLINKKSANLAVYDFGGGTFDVSIISYRNNTFVVRASGGDLNLGGRDVDRAFLTHLFSLTSLE  11298

Range 2: 10989 to 11300 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
189.4 bits(407) 0.0 83/104(80%) 0/104(0%) Plus/Minus
Query        1  GSNEVREKRWFKKALSTSLPPRFRSPPEARTTNVLLR*EMMDTSKVPPPKSYTARFADLLLIKLQADKAAADGSLSIYTHW*PLKETHWSVKFLCTLS*LAGTE  312
                GS +VREKR  +KALSTSLPP+F+SPPEARTTNVLLR*E++DTSKVPPPKSYTA+FAD L I+L ADKAAA+GSL++YTH *PLKETH SVKFL TLS* AGTE
Subject  10989  GSKDVREKR*VRKALSTSLPPKFKSPPEARTTNVLLR*EIIDTSKVPPPKSYTAKFADFLFIRLHADKAAAEGSLTMYTH**PLKETH*SVKFL*TLS*FAGTE  11300

Range 3: 10989 to 11300 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
115.6 bits(246) 0.0 52/104(50%) 0/104(0%) Minus/Plus
Query        1  FGARQLR*RAKEFHRPMRFFEWLPMRVYGQRTISSSFISLQFNQ*EISESGGIRFWWWNF*RVHHFLPQQHVCGARFRGRPESGRKRCGQSFFKPPFFSYFIRT  312
                F A +L   ++EFH  +RF EWL M V+GQRT    FIS+Q ++ E+ E G IRFW W+F RV++FLPQQ++  ARF  R + GRK C QS     FFS  +RT
Subject  10989  FSASEL*QCSEEFH*SVRFLEWLSMCVHGQRTFRGCFISVQSDKQEVGELGCIRFWRWDFRRVYYFLPQQYIRSARFWRRFKFGRKGC*QSLSDSSFFSNILRT  11300

Range 4: 10987 to 11253 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
95.0 bits(201) 0.0 46/89(52%) 0/89(0%) Plus/Minus
Query       48  HISSAQIQVSPGSAHHKRVVAVRNDGHVKSSTTKIVYRQIR*SLID*IAS**SCC*WFVVHIHALVTTQRNALVGEIPLHAIVIGGHRT  314
                +I S+QI +S  SAH++ +VAV N+ HV+S T+KIVY Q+R  L+  IA **S    FV H+H L+TTQ NAL+ EIPL+ ++I  H T
Subject  10987  NIPSSQI*ISSRSAHYECIVAVGNNRHVESPTSKIVYSQVRRLLVYQIAR**SSRGRFVDHVHTLITTQGNALISEIPLNTVIIRWH*T  11253

Range 5: 10988 to 11251 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
89.0 bits(188) 0.0 46/88(52%) 0/88(0%) Minus/Plus
Query       50  VRCPPITIACKGISPTNAFL*VVTNACIWTTNHQQQLYQLAI*SIRDQRIWRYTILVVELLTCPSFLTATTRLWCALPGET*IWAEEM  313
                V+C  I    +GIS  +AF *VV N C W+TN  + LYQ AI*  R +R W YTIL V L TC  F TAT    CAL  E *IW E M
Subject  10988  VQCQRIMTVFRGISLISAFP*VVINVCTWSTNLPRLLYQRAI**TRSRRTWLYTILEVGLSTCLLFPTATIHS*CALLEEI*IWEEGM  11251

Range 6: 10988 to 11257 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.5 bits(178) 0.0 44/90(49%) 0/90(0%) Plus/Minus
Query       44  CPHLFRPDSGLPRKRAPQTCCCGKK*WTRQKFHHQNRIPPDSLISY*LNCKLIKLLLMVRCPYTRIGNHSKKRIGR*NSFARYRNWRAPN  313
                C H F P+  L +KRA +  CCG+K* TR+K H QNRI P S  S   +C LIK    VR P T I NHS+KR  +*NS     N  A N
Subject  10988  CQHPFLPNLNLLQKRALRMYCCGRK**TRRKSHLQNRIQPSSPTSCLSDCTLIKQPRKVR*PCTHIDNHSRKRTDQ*NSSEHCHNSLALN  11257

Grapevine leafroll associated virus 2 strain Red Globe isolate WA Chot1 heat shock protein 70 like protein (HSP70h) gene, partial cds

Sequence ID: EU760831.1 Length: 551 Number of Matches: 6

Range 1: 222 to 533 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
243.0 bits(524) 0.0 101/104(97%) 0/104(0%) Minus/Plus
Query        3  CSVPANYDSVQRNFTDQCVSLSGYQCVYMDNEPSAAALSACNLINKRSANLAVYDFGGGTFDVSIISYRNNTFVVRASGGDLNLGGRDVDRAFLNHLFSLTSLE  314
                CSVPANYDSVQRNFTDQCVSLSGYQCVYM NEPSAAALSACNLINK+SANLAVYDFGGGTFDVSIISYRNNTFVVRASGGDLNLGGRDVDRAFL HLFSLTSLE
Subject    222  CSVPANYDSVQRNFTDQCVSLSGYQCVYMVNEPSAAALSACNLINKKSANLAVYDFGGGTFDVSIISYRNNTFVVRASGGDLNLGGRDVDRAFLTHLFSLTSLE  533

Range 2: 224 to 535 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
189.4 bits(407) 0.0 83/104(80%) 0/104(0%) Plus/Minus
Query        1  GSNEVREKRWFKKALSTSLPPRFRSPPEARTTNVLLR*EMMDTSKVPPPKSYTARFADLLLIKLQADKAAADGSLSIYTHW*PLKETHWSVKFLCTLS*LAGTE  312
                GS +VREKR  +KALSTSLPP+F+SPPEARTTNVLLR*E++DTSKVPPPKSYTA+FAD L I+L ADKAAA+GSL++YTH *PLKETH SVKFL TLS* AGTE
Subject    224  GSKDVREKR*VRKALSTSLPPKFKSPPEARTTNVLLR*EIIDTSKVPPPKSYTAKFADFLFIRLHADKAAAEGSLTMYTH**PLKETH*SVKFL*TLS*FAGTE  535

Range 3: 224 to 535 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
115.6 bits(246) 0.0 52/104(50%) 0/104(0%) Minus/Plus
Query        1  FGARQLR*RAKEFHRPMRFFEWLPMRVYGQRTISSSFISLQFNQ*EISESGGIRFWWWNF*RVHHFLPQQHVCGARFRGRPESGRKRCGQSFFKPPFFSYFIRT  312
                F A +L   ++EFH  +RF EWL M V+GQRT    FIS+Q ++ E+ E G IRFW W+F RV++FLPQQ++  ARF  R + GRK C QS     FFS  +RT
Subject    224  FSASEL*QCSEEFH*SVRFLEWLSMCVHGQRTFRGCFISVQSDKQEVGELGCIRFWRWDFRRVYYFLPQQYIRSARFWRRFKFGRKGC*QSLSDSSFFSNILRT  535

Range 4: 222 to 488 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
95.0 bits(201) 0.0 46/89(52%) 0/89(0%) Plus/Minus
Query       48  HISSAQIQVSPGSAHHKRVVAVRNDGHVKSSTTKIVYRQIR*SLID*IAS**SCC*WFVVHIHALVTTQRNALVGEIPLHAIVIGGHRT  314
                +I S+QI +S  SAH++ +VAV N+ HV+S T+KIVY Q+R  L+  IA **S    FV H+H L+TTQ NAL+ EIPL+ ++I  H T
Subject    222  NIPSSQI*ISSRSAHYECIVAVGNNRHVESPTSKIVYSQVRRLLVYQIAR**SSRGRFVDHVHTLITTQGNALISEIPLNTVIIRWH*T  488

Range 5: 223 to 486 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
89.0 bits(188) 0.0 46/88(52%) 0/88(0%) Minus/Plus
Query       50  VRCPPITIACKGISPTNAFL*VVTNACIWTTNHQQQLYQLAI*SIRDQRIWRYTILVVELLTCPSFLTATTRLWCALPGET*IWAEEM  313
                V+C  I    +GIS  +AF *VV N C W+TN  + LYQ AI*  R +R W YTIL V L TC  F TAT    CAL  E *IW E M
Subject    223  VQCQRIMTVFRGISLISAFP*VVINVCTWSTNLPRLLYQRAI**TRSRRTWLYTILEVGLSTCLLFPTATIHS*CALLEEI*IWEEGM  486

Range 6: 223 to 492 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.5 bits(178) 0.0 44/90(49%) 0/90(0%) Plus/Minus
Query       44  CPHLFRPDSGLPRKRAPQTCCCGKK*WTRQKFHHQNRIPPDSLISY*LNCKLIKLLLMVRCPYTRIGNHSKKRIGR*NSFARYRNWRAPN  313
                C H F P+  L +KRA +  CCG+K* TR+K H QNRI P S  S   +C LIK    VR P T I NHS+KR  +*NS     N  A N
Subject    223  CQHPFLPNLNLLQKRALRMYCCGRK**TRRKSHLQNRIQPSSPTSCLSDCTLIKQPRKVR*PCTHIDNHSRKRTDQ*NSSEHCHNSLALN  492

Nucleotide Sequence (459 letters)

Query ID:ds2016-58_48
Query definition:No definition line
Query length:589
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 10 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
46
92
138
184
230
276
322
368
414
459

Descriptions

Alignments

Grapevine leafroll associated virus 2, complete genome

Sequence ID: DQ286725.2 Length: 16535 Number of Matches: 9

Range 1: 8105 to 8527 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
344.7 bits(746) 0.0 141/141(100%) 0/141(0%) Plus/Plus
Query       36  QIHYIERNELDKCLYGDLDRFVDLQCRVYGNVSYRCPWDVCAWLSVVYDNVIATVKGESEGKSSMRINEINSVDDLVPDVGSTYLCMLQSEKLEISKHFVRKGLTKLNVLTVHEAQGETYARVNLVRLKFQEDEPFKSIRH  458
                QIHYIERNELDKCLYGDLDRFVDLQCRVYGNVSYRCPWDVCAWLSVVYDNVIATVKGESEGKSSMRINEINSVDDLVPDVGSTYLCMLQSEKLEISKHFVRKGLTKLNVLTVHEAQGETYARVNLVRLKFQEDEPFKSIRH
Subject   8105  QIHYIERNELDKCLYGDLDRFVDLQCRVYGNVSYRCPWDVCAWLSVVYDNVIATVKGESEGKSSMRINEINSVDDLVPDVGSTYLCMLQSEKLEISKHFVRKGLTKLNVLTVHEAQGETYARVNLVRLKFQEDEPFKSIRH  8527

Range 2: 8084 to 8527 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
337.4 bits(730) 0.0 144/148(97%) 0/148(0%) Minus/Minus
Query       15  VSNGFERFVLLKFQPY*VHTRVCFALSLVHG*NVKFS*PFTNKMFANFQFFGLKHAQISRPYIGD*IVHRVNFIDAHTALSFTLAFDSGNHVIVNNAQPSADIPRTTIGHVTVNTTLQVHEPIKISVKTLIKLISFNVMNLSTHPQTH  458
                VSNGFERFVLLKFQPY*VHTRVCFALSLVHG*NVKFS*PFTNKMFANFQFFGLKHAQISRPYIGD*IVHRVNFIDAHTALS TLAFDSGNHVIVNNAQPSADIPRTTIGHVTVNTTLQVHEPIKISVKTLIKLISFNVMNLST P+ H
Subject   8084  VSNGFERFVLLKFQPY*VHTRVCFALSLVHG*NVKFS*PFTNKMFANFQFFGLKHAQISRPYIGD*IVHRVNFIDAHTALSLTLAFDSGNHVIVNNAQPSADIPRTTIGHVTVNTTLQVHEPIKISVKTLIKLISFNVMNLSTIPKNH  8527

Range 3: 8094 to 8528 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
324.1 bits(701) 0.0 143/145(99%) 0/145(0%) Plus/Plus
Query       25  GWVDRFITLKEMSLISVFTEILIGSWTCNVVFTVTCPIVVRGMSALG*ALFTIT*LPLSKARVKERAVCASMKLTRWTI*SPM*GLLICACFSPKNWKLANILFVKG*LNLTF*PCTRLKAKHTRV*T**G*NFRRTNLSNPLDT  459
                G VDRFITLKEMSLISVFTEILIGSWTCNVVFTVTCPIVVRGMSALG*ALFTIT*LPLSKARV+ERAVCASMKLTRWTI*SPM*GLLICACFSPKNWKLANILFVKG*LNLTF*PCTRLKAKHTRV*T**G*NFRRTNLSNPLDT
Subject   8094  GIVDRFITLKEMSLISVFTEILIGSWTCNVVFTVTCPIVVRGMSALG*ALFTIT*LPLSKARVRERAVCASMKLTRWTI*SPM*GLLICACFSPKNWKLANILFVKG*LNLTF*PCTRLKAKHTRV*T**G*NFRRTNLSNPLDT  8528

Range 4: 8100 to 8408 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
254.5 bits(549) 0.0 101/103(98%) 0/103(0%) Minus/Minus
Query       31  YEQNVC*FPVFRTEACTNK*TLHRGLNRPPS*FH*CAYCSFLHSRL*QWQSRYRKQRSTKRRHPTDNDRTRYRKHDIAGPRTYQDLRKDTYQAHFFQCNESVN  339
                YEQNVC*FPVFRTEACTNK*TLHRGLNRPPS*FH*CAYCSF HSRL*QWQSRYRKQRSTKRRHPTDNDRTRYRKHDIAGPRTYQDLRKDTYQAHFFQCNESV+
Subject   8100  YEQNVC*FPVFRTEACTNK*TLHRGLNRPPS*FH*CAYCSFPHSRL*QWQSRYRKQRSTKRRHPTDNDRTRYRKHDIAGPRTYQDLRKDTYQAHFFQCNESVD  8408

Range 5: 8445 to 8528 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.4 bits(143) 0.0 28/28(100%) 0/28(0%) Minus/Minus
Query      376  CV*WI*KVRPPEISTLLGSHARMFRLEP  459
                CV*WI*KVRPPEISTLLGSHARMFRLEP
Subject   8445  CV*WI*KVRPPEISTLLGSHARMFRLEP  8528

Range 6: 8164 to 8526 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
269.1 bits(581) 0.0 121/121(100%) 0/121(0%) Minus/Minus
Query       95  CLMDLKGSSS*NFNLTRFTRAYVSP*ASCTVKTLSLVSPLRTKCLLISSFSD*SMHK*VDPTSGTKSSTELISLMRILLFPSLSPLTVAITLS*TTLNQAQTSHGQR*DTLP*TRHCRSTN  457
                CLMDLKGSSS*NFNLTRFTRAYVSP*ASCTVKTLSLVSPLRTKCLLISSFSD*SMHK*VDPTSGTKSSTELISLMRILLFPSLSPLTVAITLS*TTLNQAQTSHGQR*DTLP*TRHCRSTN
Subject   8164  CLMDLKGSSS*NFNLTRFTRAYVSP*ASCTVKTLSLVSPLRTKCLLISSFSD*SMHK*VDPTSGTKSSTELISLMRILLFPSLSPLTVAITLS*TTLNQAQTSHGQR*DTLP*TRHCRSTN  8526

Range 7: 8263 to 8409 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
114.2 bits(243) 0.0 48/49(98%) 0/49(0%) Plus/Plus
Query      194  HCQRRE*RKEQYAHQ*N*LGGRFSPRCRVYLFVHASVRKTGN*QTFCS*  340
                HCQRRE* KEQYAHQ*N*LGGRFSPRCRVYLFVHASVRKTGN*QTFCS*
Subject   8263  HCQRRE*GKEQYAHQ*N*LGGRFSPRCRVYLFVHASVRKTGN*QTFCS*  8409

Range 8: 8104 to 8220 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
77.1 bits(162) 0.0 39/39(100%) 0/39(0%) Plus/Plus
Query       35  TDSLH*KK*A**VSLRRS**VRGPAMSCLR*RVLSLSVG  151
                TDSLH*KK*A**VSLRRS**VRGPAMSCLR*RVLSLSVG
Subject   8104  TDSLH*KK*A**VSLRRS**VRGPAMSCLR*RVLSLSVG  8220

Range 9: 8446 to 8526 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
65.7 bits(137) 0.0 27/27(100%) 0/27(0%) Plus/Plus
Query      377  GSRRNIRACEPSKVEISGGRTFQIH*T  457
                GSRRNIRACEPSKVEISGGRTFQIH*T
Subject   8446  GSRRNIRACEPSKVEISGGRTFQIH*T  8526

Grapevine leafroll associated virus 2 isolate ISA BR, complete genome

Sequence ID: KX774192.1 Length: 16491 Number of Matches: 10

Range 1: 8105 to 8527 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
337.4 bits(730) 0.0 136/141(96%) 0/141(0%) Plus/Plus
Query       36  QIHYIERNELDKCLYGDLDRFVDLQCRVYGNVSYRCPWDVCAWLSVVYDNVIATVKGESEGKSSMRINEINSVDDLVPDVGSTYLCMLQSEKLEISKHFVRKGLTKLNVLTVHEAQGETYARVNLVRLKFQEDEPFKSIRH  458
                QIHYIERNELDKCLYGDLDRFVDLQCRVYGNVSYRCPWDVCAWLS VY N+IATVKGESEGKSSMRINEINSVDDLVPDVGSTYLCMLQSEKLEISKHF+RKGLTKLNVLTVHEAQGETYARVNLVRLKFQEDEPFKS+RH
Subject   8105  QIHYIERNELDKCLYGDLDRFVDLQCRVYGNVSYRCPWDVCAWLSTVYGNLIATVKGESEGKSSMRINEINSVDDLVPDVGSTYLCMLQSEKLEISKHFIRKGLTKLNVLTVHEAQGETYARVNLVRLKFQEDEPFKSVRH  8527

Range 2: 8089 to 8526 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
227.0 bits(489) 0.0 119/146(82%) 0/146(0%) Minus/Minus
Query       20  CLMDLKGSSS*NFNLTRFTRAYVSP*ASCTVKTLSLVSPLRTKCLLISSFSD*SMHK*VDPTSGTKSSTELISLMRILLFPSLSPLTVAITLS*TTLNQAQTSHGQR*DTLP*TRHCRSTNXXXXXXXXXXXXXXSM**ICQPIPK  457
                CL DLKGSSS*N + TRFTRAYVSP ASCTV+TLSLV PLR KCLLISSFSD*S+H+ V+PTSGTKSSTELISLMRILL PSLSP TVAI L  T LNQA TSHGQR*+TLP*TRHC+STNLSRSP +HLSSSFLSM* IC+  PK
Subject   8089  CLTDLKGSSS*NLSRTRFTRAYVSPCASCTVRTLSLVKPLRIKCLLISSFSD*SIHRYVEPTSGTKSSTELISLMRILLLPSLSPFTVAIKLPYTVLNQAHTSHGQR*ETLP*TRHCKSTNLSRSPYKHLSSSFLSM*CICRLSPK  8526

Range 3: 8084 to 8527 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
152.7 bits(327) 0.0 69/148(47%) 0/148(0%) Minus/Minus
Query       15  VSNGFERFVLLKFQPY*VHTRVCFALSLVHG*NVKFS*PFTNKMFANFQFFGLKHAQISRPYIGD*IVHRVNFIDAHTALSFTLAFDSGNHVIVNNAQPSADIPRTTIGHVTVNTTLQVHEPIKISVKTLIKLISFNVMNLSTHPQTH  458
                V +  + F+LLK +   VHTRV   L  +H  NVK S*   +K+ ANFQ   LKH QI   ++ + I++ +NF+DAHT L+FT  F   + V V+ A PSA +P TT+G++TVN+TLQVHEPI+ISV TL+  +  NV+ L   P+ H
Subject   8084  VPDRLKGFILLKLKSNKVHTRVRLTLRFMHRQNVKLS*TLADKVLANFQLLRLKHTQIRGTHVRNQIIN*INFVDAHTTLTFTFTFHGSD*VTVHCA*PSAHVPWTTVGNITVNSTLQVHEPIEISV*TLV*FVPLNVVYLPAIPEDH  8527

Range 4: 8094 to 8330 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.5 bits(176) 0.0 42/79(53%) 0/79(0%) Plus/Plus
Query       25  GWVDRFITLKEMSLISVFTEILIGSWTCNVVFTVTCPIVVRGMSALG*ALFTIT*LPLSKARVKERAVCASMKLTRWTI  261
                G   ++ TL+  +  SV+TEI IGSWTCNV FTV  P VV G  ALG*A  T+T*    K +VK R VCAS KL +  I
Subject   8094  GIAGKYTTLRGTN*TSVYTEISIGSWTCNVEFTVMFPTVVHGTCALG*AQCTVT*SLP*KVKVKVRVVCASTKLIQLMI  8330

Range 5: 8355 to 8507 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.8 bits(122) 0.0 27/51(53%) 0/51(0%) Plus/Plus
Query      286  ICACFSPKNWKLANILFVKG*LNLTF*PCTRLKAKHTRV*T**G*NFRRTN  438
                IC CFS ++WKLA+ L  + *L+LTF* C + K + TRV*T    +FRR N
Subject   8355  ICVCFSRRSWKLASTLSARV*LSLTF*RCMKRKVRRTRV*TLFDLSFRRMN  8507

Range 6: 8112 to 8399 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
87.2 bits(184) 0.0 44/96(46%) 0/96(0%) Minus/Minus
Query       43  NVC*FPVFRTEACTNK*TLHRGLNRPPS*FH*CAYCSFLHSRL*QWQSRYRKQRSTKRRHPTDNDRTRYRKHDIAGPRTYQDLRKDTYQAHFFQCN  330
                + C*FP   TEA T+     +  N   +*F *CAY S+LH  L + +  YR    TKR  P DN R  YRK DIA PRTY+DLR +T      QC+
Subject   8112  SAC*FPASPTEAYTDTWNPRQEPNHQLN*FR*CAYYSYLHFHLSR*RLSYRTLCLTKRTRPMDNGRKHYRKLDIASPRTYRDLRINTCLVRSSQCS  8399

Range 7: 8451 to 8528 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
26.3 bits(51) 0.0 13/26(50%) 0/26(0%) Minus/Minus
Query      382  CV*WI*KVRPPEISTLLGSHARMFRL  459
                C *  *+V PPE     GSHAR   L
Subject   8451  CA*QT*RVHPPET*VEQGSHARTSHL  8528

Range 8: 8107 to 8220 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.1 bits(68) 0.0 21/38(55%) 0/38(0%) Plus/Plus
Query       38  DSLH*KK*A**VSLRRS**VRGPAMSCLR*RVLSLSVG  151
                ++LH*++    V +RRS *VRG AMS LR*  L LS+G
Subject   8107  NTLH*EERTRQVFIRRSR*VRGLAMSSLR*CFLPLSMG  8220

Range 9: 8269 to 8394 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.0 bits(57) 0.0 19/42(45%) 0/42(0%) Plus/Plus
Query      200  QRRE*RKEQYAHQ*N*LGGRFSPRCRVYLFVHASVRKTGN*Q  325
                +R +*R E YAHQ N*    F      ++ V+ASV + GN*Q
Subject   8269  ER*K*R*E*YAHQRN*FS**FGS*RGFHVSVYASVGEAGN*Q  8394

Range 10: 8449 to 8508 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
26.3 bits(51) 0.0 10/20(50%) 0/20(0%) Plus/Plus
Query      380  SRRNIRACEPSKVEISGGRT  439
                +R ++RACEP    +SGG T
Subject   8449  AR*DVRACEPCST*VSGG*T  8508

Grapevine rootstock stem lesion associated virus, complete genome

Sequence ID: NC_004724.1 Length: 16527 Number of Matches: 9

Range 1: 8090 to 8512 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
339.7 bits(735) 0.0 137/141(97%) 0/141(0%) Plus/Plus
Query       36  QIHYIERNELDKCLYGDLDRFVDLQCRVYGNVSYRCPWDVCAWLSVVYDNVIATVKGESEGKSSMRINEINSVDDLVPDVGSTYLCMLQSEKLEISKHFVRKGLTKLNVLTVHEAQGETYARVNLVRLKFQEDEPFKSIRH  458
                QIHYIERNELDKCLYGDLDRFVDLQCRVYGNVSYRCPWDVCAWLSVVYDN+IATVKGESEGKSSMRINEINSVDDLVPD+GSTYLCMLQSEKLEISKHF+RKGL+KLNVLTVHEAQGETYARVNLVRLKFQEDEPFKSIRH
Subject   8090  QIHYIERNELDKCLYGDLDRFVDLQCRVYGNVSYRCPWDVCAWLSVVYDNMIATVKGESEGKSSMRINEINSVDDLVPDMGSTYLCMLQSEKLEISKHFIRKGLSKLNVLTVHEAQGETYARVNLVRLKFQEDEPFKSIRH  8512

Range 2: 8149 to 8511 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
251.2 bits(542) 0.0 113/121(93%) 0/121(0%) Minus/Minus
Query       95  CLMDLKGSSS*NFNLTRFTRAYVSP*ASCTVKTLSLVSPLRTKCLLISSFSD*SMHK*VDPTSGTKSSTELISLMRILLFPSLSPLTVAITLS*TTLNQAQTSHGQR*DTLP*TRHCRSTN  457
                CLMDLKGSSS*NFNLTRFTRAYVSP*ASCTVKTLSL SPLR KCLLIS+FSD*SMHK*V+P SGTKSSTELISLMR+LLFPSLSPLTVAI LS*TTLNQAQTSHGQR DTLP*TRHCRSTN
Subject   8149  CLMDLKGSSS*NFNLTRFTRAYVSP*ASCTVKTLSLESPLRMKCLLISNFSD*SMHK*VEPISGTKSSTELISLMRMLLFPSLSPLTVAIMLS*TTLNQAQTSHGQRYDTLP*TRHCRSTN  8511

Range 3: 8069 to 8506 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
210.9 bits(454) 0.0 82/146(56%) 0/146(0%) Minus/Minus
Query       15  NGFERFVLLKFQPY*VHTRVCFALSLVHG*NVKFS*PFTNKMFANFQFFGLKHAQISRPYIGD*IVHRVNFIDAHTALSFTLAFDSGNHVIVNNAQPSADIPRTTIGHVTVNTTLQVHEPIKISVKTLIKLISFNVMNLSTHPQTH  452
                +GF+R VLLKFQ + +H RVC  LSLVHG ++KF  PF ++M  +F    LKHAQ+SR +IGD*+VHRV+F++AH   SF    + G+HV++NNA P AD+P T + HVTV+TTLQV+EP+K+SVK L++ ISFN+MNLST  + H
Subject   8069  DGFKRLVLLKFQSHQIHARVCLTLSLVHGQDIKFREPFADEMLTDF*LLRLKHAQVSRTHIGD*VVHRVDFVNAHATFSFAFTLNGGDHVVINNA*PGADVPWTAVRHVTVDTTLQVYEPVKVSVKALVEFISFNIMNLSTVSEDH  8506

Range 4: 8085 to 8504 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
171.1 bits(367) 0.0 84/140(60%) 0/140(0%) Plus/Plus
Query       31  VDRFITLKEMSLISVFTEILIGSWTCNVVFTVTCPIVVRGMSALG*ALFTIT*LPLSKARVKERAVCASMKLTRWTI*SPM*GLLICACFSPKNWKLANILFVKG*LNLTF*PCTRLKAKHTRV*T**G*NFRRTNLSNP  450
                VDRFI LKEM+  S FTE L GS TCNVV TVTC   V G SA G*ALF  T* P  + + KE+  CA  K TRWT *SP+  LL CACFS ++ K  +I   KG LNL  *PCTRLK +HTR *  * *NFRRT+L NP
Subject   8085  VDRFIILKEMNSTSAFTETLTGS*TCNVVSTVTCRTAVHGTSAPG*ALFMTT*SPPLRVKAKEKVACALTKSTRWTT*SPIWVLLTCACFSLRS*KSVSISSAKGSLNLMS*PCTRLKVRHTRA*IW*D*NFRRTSLLNP  8504

Range 5: 8085 to 8384 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.9 bits(275) 0.0 59/100(59%) 0/100(0%) Minus/Minus
Query       31  NVC*FPVFRTEACTNK*TLHRGLNRPPS*FH*CAYCSFLHSRL*QWQSRYRKQRSTKRRHPTDNDRTRYRKHDIAGPRTYQDLRKDTYQAHFFQCNESVN  330
                N  *F   +TEACT+K*  +RGL+RPPS*F *CA   FL    *+W+S   KQR T+RR P D+  TRYR+HDIAG RT Q LRK T + HFFQ NESV+
Subject   8085  NAY*FLTSQTEACTSK*NPYRGLSRPPS*FR*CACYFFLRFHP*RWRSCCHKQRLTRRRRPMDSGTTRYRRHDIAGLRTCQGLRKGTCRVHFFQYNESVD  8384

Range 6: 8430 to 8507 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
39.1 bits(79) 0.0 18/26(69%) 0/26(0%) Minus/Minus
Query      376  *WI*KVRPPEISTLLGSHARMFRLEP  453
                *WI*K RPPEIS    S ARM  LEP
Subject   8430  *WI*KARPPEISISPDSRARMSHLEP  8507

Range 7: 8089 to 8205 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.4 bits(108) 0.0 28/39(72%) 0/39(0%) Plus/Plus
Query       35  TDSLH*KK*A**VSLRRS**VRGPAMSCLR*RVLSLSVG  151
                TDSL+*KK*   V LRR * VR PAMSCLR*RV+ LS+G
Subject   8089  TDSLY*KK*TRQVPLRRP*QVRRPAMSCLR*RVVPLSMG  8205

Range 8: 8269 to 8373 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.9 bits(83) 0.0 20/35(57%) 0/35(0%) Plus/Plus
Query      215  RKEQYAHQ*N*LGGRFSPRCRVYLFVHASVRKTGN  319
                RK+ +AH  N LGGR SPR   YL VHASV +  N
Subject   8269  RKK*HAH*RNQLGGRLSPRYGFYLLVHASV*EVRN  8373

Range 9: 8431 to 8505 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.8 bits(74) 0.0 16/25(64%) 0/25(0%) Plus/Plus
Query      377  GSRRNIRACEPSKVEISGGRTFQIH  451
                GSR +IRA E  ++EISGGR F IH
Subject   8431  GSR*DIRARESGEIEISGGRAF*IH  8505

Grapevine leafroll associated virus 2 isolate GLV2 1050 02 polyprotein (ORF1a), RNA dependent RNA polymerase (ORF1b), 6.3 kDa small hydrophobic protein (ORF2), putative heat shock protein 70 (ORF3), 63 kDa putative cell to cell movemennt protein (ORF4), minor capsid protein (CPm), major capsid protein (CP), 19 kDa protein (ORF7), and 24 kDa protein (ORF8) genes, complete cds

Sequence ID: JX513891.1 Length: 16489 Number of Matches: 9

Range 1: 8078 to 8500 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
339.7 bits(735) 0.0 137/141(97%) 0/141(0%) Plus/Plus
Query       36  QIHYIERNELDKCLYGDLDRFVDLQCRVYGNVSYRCPWDVCAWLSVVYDNVIATVKGESEGKSSMRINEINSVDDLVPDVGSTYLCMLQSEKLEISKHFVRKGLTKLNVLTVHEAQGETYARVNLVRLKFQEDEPFKSIRH  458
                QIHYIERNELDKCLYGDLDRFVDLQCRVYGNVSYRCPWDVCAWLSVVYDN+IATVKGESEGKSSMRINEINSVDDLVPD+GSTYLCMLQSEKLEISKHF+RKGL+KLNVLTVHEAQGETYARVNLVRLKFQEDEPFKSIRH
Subject   8078  QIHYIERNELDKCLYGDLDRFVDLQCRVYGNVSYRCPWDVCAWLSVVYDNMIATVKGESEGKSSMRINEINSVDDLVPDMGSTYLCMLQSEKLEISKHFIRKGLSKLNVLTVHEAQGETYARVNLVRLKFQEDEPFKSIRH  8500

Range 2: 8137 to 8499 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
251.2 bits(542) 0.0 113/121(93%) 0/121(0%) Minus/Minus
Query       95  CLMDLKGSSS*NFNLTRFTRAYVSP*ASCTVKTLSLVSPLRTKCLLISSFSD*SMHK*VDPTSGTKSSTELISLMRILLFPSLSPLTVAITLS*TTLNQAQTSHGQR*DTLP*TRHCRSTN  457
                CLMDLKGSSS*NFNLTRFTRAYVSP*ASCTVKTLSL SPLR KCLLIS+FSD*SMHK*V+P SGTKSSTELISLMR+LLFPSLSPLTVAI LS*TTLNQAQTSHGQR DTLP*TRHCRSTN
Subject   8137  CLMDLKGSSS*NFNLTRFTRAYVSP*ASCTVKTLSLESPLRMKCLLISNFSD*SMHK*VEPMSGTKSSTELISLMRMLLFPSLSPLTVAIMLS*TTLNQAQTSHGQRYDTLP*TRHCRSTN  8499

Range 3: 8057 to 8494 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
210.5 bits(453) 0.0 81/146(55%) 0/146(0%) Minus/Minus
Query       15  NGFERFVLLKFQPY*VHTRVCFALSLVHG*NVKFS*PFTNKMFANFQFFGLKHAQISRPYIGD*IVHRVNFIDAHTALSFTLAFDSGNHVIVNNAQPSADIPRTTIGHVTVNTTLQVHEPIKISVKTLIKLISFNVMNLSTHPQTH  452
                +GF+R VLLKFQ + +H RVC  LSLVHG ++KF  PF ++M  +F    LKHAQ+SR ++GD*+VHRV+F++AH   SF    + G+HV++NNA P AD+P T + HVTV+TTLQV+EP+K+SVK L++ ISFN+MNLST  + H
Subject   8057  DGFKRLVLLKFQSHQIHARVCLTLSLVHGQDIKFREPFADEMLTDF*LLRLKHAQVSRTHVGD*VVHRVDFVNAHATFSFAFTLNGGDHVVINNA*PGADVPWTAVRHVTVDTTLQVYEPVKVSVKALVEFISFNIMNLSTVSEDH  8494

Range 4: 8073 to 8492 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
170.1 bits(365) 0.0 84/140(60%) 0/140(0%) Plus/Plus
Query       31  VDRFITLKEMSLISVFTEILIGSWTCNVVFTVTCPIVVRGMSALG*ALFTIT*LPLSKARVKERAVCASMKLTRWTI*SPM*GLLICACFSPKNWKLANILFVKG*LNLTF*PCTRLKAKHTRV*T**G*NFRRTNLSNP  450
                VDRFI LKEM+  S FTE L GS TCNVV TVTC   V G SA G*ALF  T* P  + + KE+  CA  K TRWT *SP   LL CACFS ++ K  +I   KG LNL  *PCTRLK +HTR *  * *NFRRT+L NP
Subject   8073  VDRFIILKEMNSTSAFTETLTGS*TCNVVSTVTCRTAVHGTSAPG*ALFMTT*SPPLRVKAKEKVACALTKSTRWTT*SPTWVLLTCACFSLRS*KSVSISSAKGSLNLMS*PCTRLKVRHTRA*IW*D*NFRRTSLLNP  8492

Range 5: 8073 to 8372 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
126.6 bits(270) 0.0 59/100(59%) 0/100(0%) Minus/Minus
Query       31  NVC*FPVFRTEACTNK*TLHRGLNRPPS*FH*CAYCSFLHSRL*QWQSRYRKQRSTKRRHPTDNDRTRYRKHDIAGPRTYQDLRKDTYQAHFFQCNESVN  330
                N  *F   +TEACT+K*   RGL+RPPS*F *CA   FL    *+W+S   KQR T+RR P D+  TRYR+HDIAG RT Q LRK T + HFFQ NESV+
Subject   8073  NAY*FLTSQTEACTSK*NPCRGLSRPPS*FR*CACYFFLRFHP*RWRSCCHKQRLTRRRRPMDSGTTRYRRHDIAGLRTCQGLRKGTCRVHFFQYNESVD  8372

Range 6: 8418 to 8495 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
39.1 bits(79) 0.0 18/26(69%) 0/26(0%) Minus/Minus
Query      376  *WI*KVRPPEISTLLGSHARMFRLEP  453
                *WI*K RPPEIS    S ARM  LEP
Subject   8418  *WI*KARPPEISISPDSRARMSHLEP  8495

Range 7: 8077 to 8193 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.4 bits(108) 0.0 28/39(72%) 0/39(0%) Plus/Plus
Query       35  TDSLH*KK*A**VSLRRS**VRGPAMSCLR*RVLSLSVG  151
                TDSL+*KK*   V LRR * VR PAMSCLR*RV+ LS+G
Subject   8077  TDSLY*KK*TRQVPLRRP*QVRRPAMSCLR*RVVPLSMG  8193

Range 8: 8257 to 8361 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.5 bits(82) 0.0 20/35(57%) 0/35(0%) Plus/Plus
Query      215  RKEQYAHQ*N*LGGRFSPRCRVYLFVHASVRKTGN  319
                RK+ +AH  N LGGR SPR   YL VHASV +  N
Subject   8257  RKK*HAH*RNQLGGRLSPRHGFYLLVHASV*EVRN  8361

Range 9: 8419 to 8493 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.8 bits(74) 0.0 16/25(64%) 0/25(0%) Plus/Plus
Query      377  GSRRNIRACEPSKVEISGGRTFQIH  451
                GSR +IRA E  ++EISGGR F IH
Subject   8419  GSR*DIRARESGEIEISGGRAF*IH  8493

Grapevine rootstock stem lesion associated virus methyltransferase/helicase polyprotein, RNA dependent RNA polymerase, p6, HSP70 like protein, HSP90 like protein, coat protein duplicate, coat protein, p19, and p24 genes, complete cds

Sequence ID: AF314061.1 Length: 16527 Number of Matches: 9

Range 1: 8090 to 8512 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
339.7 bits(735) 0.0 137/141(97%) 0/141(0%) Plus/Plus
Query       36  QIHYIERNELDKCLYGDLDRFVDLQCRVYGNVSYRCPWDVCAWLSVVYDNVIATVKGESEGKSSMRINEINSVDDLVPDVGSTYLCMLQSEKLEISKHFVRKGLTKLNVLTVHEAQGETYARVNLVRLKFQEDEPFKSIRH  458
                QIHYIERNELDKCLYGDLDRFVDLQCRVYGNVSYRCPWDVCAWLSVVYDN+IATVKGESEGKSSMRINEINSVDDLVPD+GSTYLCMLQSEKLEISKHF+RKGL+KLNVLTVHEAQGETYARVNLVRLKFQEDEPFKSIRH
Subject   8090  QIHYIERNELDKCLYGDLDRFVDLQCRVYGNVSYRCPWDVCAWLSVVYDNMIATVKGESEGKSSMRINEINSVDDLVPDMGSTYLCMLQSEKLEISKHFIRKGLSKLNVLTVHEAQGETYARVNLVRLKFQEDEPFKSIRH  8512

Range 2: 8149 to 8511 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
251.2 bits(542) 0.0 113/121(93%) 0/121(0%) Minus/Minus
Query       95  CLMDLKGSSS*NFNLTRFTRAYVSP*ASCTVKTLSLVSPLRTKCLLISSFSD*SMHK*VDPTSGTKSSTELISLMRILLFPSLSPLTVAITLS*TTLNQAQTSHGQR*DTLP*TRHCRSTN  457
                CLMDLKGSSS*NFNLTRFTRAYVSP*ASCTVKTLSL SPLR KCLLIS+FSD*SMHK*V+P SGTKSSTELISLMR+LLFPSLSPLTVAI LS*TTLNQAQTSHGQR DTLP*TRHCRSTN
Subject   8149  CLMDLKGSSS*NFNLTRFTRAYVSP*ASCTVKTLSLESPLRMKCLLISNFSD*SMHK*VEPISGTKSSTELISLMRMLLFPSLSPLTVAIMLS*TTLNQAQTSHGQRYDTLP*TRHCRSTN  8511

Range 3: 8069 to 8506 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
210.9 bits(454) 0.0 82/146(56%) 0/146(0%) Minus/Minus
Query       15  NGFERFVLLKFQPY*VHTRVCFALSLVHG*NVKFS*PFTNKMFANFQFFGLKHAQISRPYIGD*IVHRVNFIDAHTALSFTLAFDSGNHVIVNNAQPSADIPRTTIGHVTVNTTLQVHEPIKISVKTLIKLISFNVMNLSTHPQTH  452
                +GF+R VLLKFQ + +H RVC  LSLVHG ++KF  PF ++M  +F    LKHAQ+SR +IGD*+VHRV+F++AH   SF    + G+HV++NNA P AD+P T + HVTV+TTLQV+EP+K+SVK L++ ISFN+MNLST  + H
Subject   8069  DGFKRLVLLKFQSHQIHARVCLTLSLVHGQDIKFREPFADEMLTDF*LLRLKHAQVSRTHIGD*VVHRVDFVNAHATFSFAFTLNGGDHVVINNA*PGADVPWTAVRHVTVDTTLQVYEPVKVSVKALVEFISFNIMNLSTVSEDH  8506

Range 4: 8085 to 8504 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
171.1 bits(367) 0.0 84/140(60%) 0/140(0%) Plus/Plus
Query       31  VDRFITLKEMSLISVFTEILIGSWTCNVVFTVTCPIVVRGMSALG*ALFTIT*LPLSKARVKERAVCASMKLTRWTI*SPM*GLLICACFSPKNWKLANILFVKG*LNLTF*PCTRLKAKHTRV*T**G*NFRRTNLSNP  450
                VDRFI LKEM+  S FTE L GS TCNVV TVTC   V G SA G*ALF  T* P  + + KE+  CA  K TRWT *SP+  LL CACFS ++ K  +I   KG LNL  *PCTRLK +HTR *  * *NFRRT+L NP
Subject   8085  VDRFIILKEMNSTSAFTETLTGS*TCNVVSTVTCRTAVHGTSAPG*ALFMTT*SPPLRVKAKEKVACALTKSTRWTT*SPIWVLLTCACFSLRS*KSVSISSAKGSLNLMS*PCTRLKVRHTRA*IW*D*NFRRTSLLNP  8504

Range 5: 8085 to 8384 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.9 bits(275) 0.0 59/100(59%) 0/100(0%) Minus/Minus
Query       31  NVC*FPVFRTEACTNK*TLHRGLNRPPS*FH*CAYCSFLHSRL*QWQSRYRKQRSTKRRHPTDNDRTRYRKHDIAGPRTYQDLRKDTYQAHFFQCNESVN  330
                N  *F   +TEACT+K*  +RGL+RPPS*F *CA   FL    *+W+S   KQR T+RR P D+  TRYR+HDIAG RT Q LRK T + HFFQ NESV+
Subject   8085  NAY*FLTSQTEACTSK*NPYRGLSRPPS*FR*CACYFFLRFHP*RWRSCCHKQRLTRRRRPMDSGTTRYRRHDIAGLRTCQGLRKGTCRVHFFQYNESVD  8384

Range 6: 8430 to 8507 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
39.1 bits(79) 0.0 18/26(69%) 0/26(0%) Minus/Minus
Query      376  *WI*KVRPPEISTLLGSHARMFRLEP  453
                *WI*K RPPEIS    S ARM  LEP
Subject   8430  *WI*KARPPEISISPDSRARMSHLEP  8507

Range 7: 8089 to 8205 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.4 bits(108) 0.0 28/39(72%) 0/39(0%) Plus/Plus
Query       35  TDSLH*KK*A**VSLRRS**VRGPAMSCLR*RVLSLSVG  151
                TDSL+*KK*   V LRR * VR PAMSCLR*RV+ LS+G
Subject   8089  TDSLY*KK*TRQVPLRRP*QVRRPAMSCLR*RVVPLSMG  8205

Range 8: 8269 to 8373 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.9 bits(83) 0.0 20/35(57%) 0/35(0%) Plus/Plus
Query      215  RKEQYAHQ*N*LGGRFSPRCRVYLFVHASVRKTGN  319
                RK+ +AH  N LGGR SPR   YL VHASV +  N
Subject   8269  RKK*HAH*RNQLGGRLSPRYGFYLLVHASV*EVRN  8373

Range 9: 8431 to 8505 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.8 bits(74) 0.0 16/25(64%) 0/25(0%) Plus/Plus
Query      377  GSRRNIRACEPSKVEISGGRTFQIH  451
                GSR +IRA E  ++EISGGR F IH
Subject   8431  GSR*DIRARESGEIEISGGRAF*IH  8505

Nucleotide Sequence (887 letters)

Query ID:ds2016-58_48
Query definition:No definition line
Query length:589
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 10 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
89
178
267
356
445
534
623
712
801
887

Descriptions

Alignments

Grapevine leafroll associated virus 2, complete genome

Sequence ID: DQ286725.2 Length: 16535 Number of Matches: 12

Range 1: 5999 to 6877 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
675.5 bits(1468) 0.0 289/293(99%) 0/293(0%) Plus/Minus
Query        7  GWYDRHSSLARITPTLCPETSLLSKVQFHCNYAKKPSNTL*QRAACYPLKKLFH*KWYARRDSEKKRKCRS*LSGVVDTPFGLKEKQRQHRRNRPRDERETPDNSRDNVYLLD**DAKKEYVVVRVNALTTCPTQGKRETRHAH*QAPKKRLRASTF*TTRCRIAILITMEQTMIAERNSITPPLKDHLQSVRQSSKR**KIITRHPAYITYEKRKAQHDYTRESEEFLSSISRQASFRPPFQ*GDRSIQKRPRQLIP*K*WHHLRKRTHHVFVT*P*ATHAIL*KSLNIFTH  885
                GWYD HSSLARITPTLCPETSLLSKVQFHCNYAKKPSNTL*QRAACYPLKKLFH*KWYARRDSEKKRKCR *LSGVVDTPFGLKEKQRQHRRNRPRDE ETPDNSRDNVYLLD**DAKKEYVVVRVNALTTCPTQGKRETRHAH*QAPKKRLRASTF*TTRCRIAILITMEQTMIAERNSITPPLKDHLQSVRQSSKR**KIITRHPAYITYEKRKAQHDYTRESEEFLSSISRQASFRPPFQ*GDRSIQKRPRQLIP*K*WHHLRKRTHHVFVT*P* THAIL*KSLNIFTH
Subject   5999  GWYDWHSSLARITPTLCPETSLLSKVQFHCNYAKKPSNTL*QRAACYPLKKLFH*KWYARRDSEKKRKCRG*LSGVVDTPFGLKEKQRQHRRNRPRDE*ETPDNSRDNVYLLD**DAKKEYVVVRVNALTTCPTQGKRETRHAH*QAPKKRLRASTF*TTRCRIAILITMEQTMIAERNSITPPLKDHLQSVRQSSKR**KIITRHPAYITYEKRKAQHDYTRESEEFLSSISRQASFRPPFQ*GDRSIQKRPRQLIP*K*WHHLRKRTHHVFVT*P*TTHAIL*KSLNIFTH  6877

Range 2: 5997 to 6536 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
423.5 bits(918) 0.0 179/180(99%) 0/180(0%) Minus/Plus
Query      348  SCVNMFKDF*RIACVA*G*VTNTW*VLLRRWCHYFYGISCRGRFWIERSPH*NGGRKLACRLIEERNSSLSRV*SCWAFRFSYVI*AGWRVIIFYHLFDDCLTD*R*SLRGGVMLLRSAIIVCSIVMRMAILHRVV*KVEARNRFFGAC*CACRVSRFP*VGQVVSAFTRTTTYSFFASH  887
                SCVNMFKDF*RIACV *G*VTNTW*VLLRRWCHYFYGISCRGRFWIERSPH*NGGRKLACRLIEERNSSLSRV*SCWAFRFSYVI*AGWRVIIFYHLFDDCLTD*R*SLRGGVMLLRSAIIVCSIVMRMAILHRVV*KVEARNRFFGAC*CACRVSRFP*VGQVVSAFTRTTTYSFFASH
Subject   5997  SCVNMFKDF*RIACVV*G*VTNTW*VLLRRWCHYFYGISCRGRFWIERSPH*NGGRKLACRLIEERNSSLSRV*SCWAFRFSYVI*AGWRVIIFYHLFDDCLTD*R*SLRGGVMLLRSAIIVCSIVMRMAILHRVV*KVEARNRFFGAC*CACRVSRFP*VGQVVSAFTRTTTYSFFASH  6536

Range 3: 6573 to 6878 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
228.3 bits(492) 0.0 99/102(97%) 0/102(0%) Minus/Plus
Query        6  GVSLSSRGRFLLCWRCFSFNPKGVSTTPES*LRHFRFFSESLRAYHF**KSFLSG*HAALC*RVFEGFFA*LQ*N*TFERREVSGQRVGVIRAKELCRSYHP  311
                GVS SSRGRFLLCWRCFSFNPKGVSTTPES* RHFRFFSESLRAYHF**KSFLSG*HAALC*RVFEGFFA*LQ*N*TFERREVSGQRVGVIRAKELC+SYHP
Subject   6573  GVSHSSRGRFLLCWRCFSFNPKGVSTTPES*PRHFRFFSESLRAYHF**KSFLSG*HAALC*RVFEGFFA*LQ*N*TFERREVSGQRVGVIRAKELCQSYHP  6878

Range 4: 5997 to 6518 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
421.7 bits(914) 0.0 173/174(99%) 0/174(0%) Plus/Minus
Query      366  ICCSASKRTYNLPNSRKARDATCALTGTKETIASLHLLNHSM*NRHPHHNGTNDDSRTQQHHTTS*RSPSIGQTIVEKMIEDYHTPPRLYNV*KTESPTRLYTRERRVSLFDQPTGKFPTTISVRRSLDPETSPTTYPVEVVAPSPQKNSPRVRYLTLSYACDPLKVFEHIHAR  887
                ICCSASKRTYNLPNSRKARDATCALTGTKETIASLHLLNHSM*NRHPHHNGTNDDSRTQQHHTTS*RSPSIGQTIVEKMIEDYHTPPRLYNV*KTESPTRLYTRERRVSLFDQPTGKFPTTISVRRSLDPETSPTTYPVEVVAPSPQKNSPRVRYLTL+YACDPLKVFEHIHAR
Subject   5997  ICCSASKRTYNLPNSRKARDATCALTGTKETIASLHLLNHSM*NRHPHHNGTNDDSRTQQHHTTS*RSPSIGQTIVEKMIEDYHTPPRLYNV*KTESPTRLYTRERRVSLFDQPTGKFPTTISVRRSLDPETSPTTYPVEVVAPSPQKNSPRVRYLTLNYACDPLKVFEHIHAR  6518

Range 5: 6621 to 6878 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
195.3 bits(420) 0.0 84/86(98%) 0/86(0%) Plus/Minus
Query        6  WMV*PAQLFGTDNPHPLPRDLSSFEGSVSLQLREETFEYSLAESCVLSTQKTFSLKVVRAERFRKETKMP*LTFRSSRHTFRVEGE  263
                WMV* AQLFGTDNPHPLPRDLSSFEGSVSLQLREETFEYSLAESCVLSTQKTFSLKVVRAERFRKETKMP LTFRSSRHTFRVEGE
Subject   6621  WMV*LAQLFGTDNPHPLPRDLSSFEGSVSLQLREETFEYSLAESCVLSTQKTFSLKVVRAERFRKETKMPWLTFRSSRHTFRVEGE  6878

Range 6: 5999 to 6793 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
563.7 bits(1224) 0.0 264/265(100%) 0/265(0%) Minus/Plus
Query       91  VREYVQRLLKDRMRSLGLSNEHVVSSFAEMVPLLLRDKLSGTFLDRAISSLKWWSETCLSADRREKLFALACIVVLGFPFFIRYIGGVACDNXXXXXXXXXXXLKVIFKRWCDAVAFGYHRLFHCDEDGDSTSSGLKGGGSQSFLWCXXXXXXXXXXXXSWAGCKCVYSHYNIFFLCVSLVEEVNVIARVVGGFSFISRPVSSVLALLLLQPERCVDYSGKLATAFSFLFGISPRVPLLVKKFFEWITRSSLLKSIRRFLRVVAV  885
                VREYVQRLLKDRMRSLGLSNEHVVSSFAEMVPLLLRDKLSGTFLDRAISSLKWWSETCLSADRREKLFALACIVVLGFPFFIRYIGGVACDNLLSSFRRLSDRLKVIFKRWCDAVAFGYHRLFHCDEDGDSTSSGLKGGGSQSFLWCLLMRMSRLALSLSWAGCKCVYSHYNIF LCVSLVEEVNVIARVVGGFSFISRPVSSVLALLLLQPERCVDYSGKLATAFSFLFGISPRVPLLVKKFFEWITRSSLLKSIRRFLRVVAV
Subject   5999  VREYVQRLLKDRMRSLGLSNEHVVSSFAEMVPLLLRDKLSGTFLDRAISSLKWWSETCLSADRREKLFALACIVVLGFPFFIRYIGGVACDNLLSSFRRLSDRLKVIFKRWCDAVAFGYHRLFHCDEDGDSTSSGLKGGGSQSFLWCLLMRMSRLALSLSWAGCKCVYSHYNIFLLCVSLVEEVNVIARVVGGFSFISRPVSSVLALLLLQPERCVDYSGKLATAFSFLFGISPRVPLLVKKFFEWITRSSLLKSIRRFLRVVAV  6793

Range 7: 5998 to 6774 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
563.7 bits(1224) 0.0 257/259(99%) 0/259(0%) Plus/Minus
Query      110  NLRILFSRELRVIHSKNFFTKSGTRGEIPKRNENAVANFPE*STHLSG*RRSSASTEETGREMKEKPPTTLAITFTSSTNETQRKNML*CE*THLQPAQLKESARRDMRINRHQRNDCEPPPFKPLDVESPSSSQWNKR**PNATASHHLLKITFXXXXXXXXXXXXLSHATPPI*RMKNGKPNTTIHARAKSFSLRSADRQVSDHHFSEEIARSRNVPDNLSRRSSGTISAKELTTCSLLNPKLRMRSFKSL*TYSRT  886
                NLRILFSRELRVIHSKNFFTKSGTRGEIPKRNENAVANFPE*STHLSG*RRSSASTEETGREM EKPPTTLAITFTSSTNETQR+NML*CE*THLQPAQLKESARRDMRINRHQRNDCEPPPFKPLDVESPSSSQWNKR**PNATASHHLLKITFNRSDNRRKDDRRLSHATPPI*RMKNGKPNTTIHARAKSFSLRSADRQVSDHHFSEEIARSRNVPDNLSRRSSGTISAKELTTCSLLNPKLRMRSFKSL*TYSRT
Subject   5998  NLRILFSRELRVIHSKNFFTKSGTRGEIPKRNENAVANFPE*STHLSG*RRSSASTEETGREMNEKPPTTLAITFTSSTNETQRRNML*CE*THLQPAQLKESARRDMRINRHQRNDCEPPPFKPLDVESPSSSQWNKR**PNATASHHLLKITFNRSDNRRKDDRRLSHATPPI*RMKNGKPNTTIHARAKSFSLRSADRQVSDHHFSEEIARSRNVPDNLSRRSSGTISAKELTTCSLLNPKLRMRSFKSL*TYSRT  6774

Range 8: 6842 to 6877 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
33.6 bits(67) 0.0 12/12(100%) 0/12(0%) Minus/Plus
Query        7  YPCQRAVPVIPS  42
                YPCQRAVPVIPS
Subject   6842  YPCQRAVPVIPS  6877

Range 9: 6844 to 6879 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
33.6 bits(67) 0.0 11/12(92%) 0/12(0%) Plus/Minus
Query        5  VDGMTGTALWHG  40
                +DGMTGTALWHG
Subject   6844  LDGMTGTALWHG  6879

Range 10: 6298 to 6876 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
415.3 bits(900) 0.0 189/193(98%) 0/193(0%) Minus/Plus
Query        8  V*PIEGDL*EXXXXXXVRLSSFVPL**GWRFYIEWFKRWRLAIVSLVPVNAHVASRAFLELGRL*VRLLALQHILSLRLISRGGKRYRESCRGFLFHLAAGFFCAGAASPSTRKVCRLLRKVSYGIFVSFRNLSARTTFSEKVF*VDNTQLSAKEYSKVSSRSCSETEPSKEERSRGKGWGLSVPKSCAGHTI  586
                V*PIEGDL*EVV*CCCVRLSSFVPL**GWRFYIEWFKRWRLAIVSLVPVNAHVASRAFLELGRL*VRLLALQHI SLRLISRGGKRYRESCRGFL HLAAGFFCAGAASPSTRKVCRLLRKVS+GIFVSFRNLSARTTFSEKVF*VDNTQLSAKEYSKVSSRSCSETEPSKEERSRGKGWGLSVPKSCA HTI
Subject   6298  V*PIEGDL*EVV*CCCVRLSSFVPL**GWRFYIEWFKRWRLAIVSLVPVNAHVASRAFLELGRL*VRLLALQHIPSLRLISRGGKRYRESCRGFLIHLAAGFFCAGAASPSTRKVCRLLRKVSHGIFVSFRNLSARTTFSEKVF*VDNTQLSAKEYSKVSSRSCSETEPSKEERSRGKGWGLSVPKSCASHTI  6876

Range 11: 6142 to 6267 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
96.8 bits(205) 0.0 42/42(100%) 0/42(0%) Minus/Plus
Query      617  LLTEMVVGNLPVG*SKRETLRSRVYSRVGLSVFHTLYRRGGV  742
                LLTEMVVGNLPVG*SKRETLRSRVYSRVGLSVFHTLYRRGGV
Subject   6142  LLTEMVVGNLPVG*SKRETLRSRVYSRVGLSVFHTLYRRGGV  6267

Range 12: 5998 to 6081 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.8 bits(133) 0.0 27/28(96%) 0/28(0%) Minus/Plus
Query      803  RA*ICSKTFKGSHA*LRVK*RTRGEFFC  886
                RA*ICSKTFKGSHA* RVK*RTRGEFFC
Subject   5998  RA*ICSKTFKGSHA*FRVK*RTRGEFFC  6081

Grapevine leafroll associated virus 2 isolate GLV2 1050 02 polyprotein (ORF1a), RNA dependent RNA polymerase (ORF1b), 6.3 kDa small hydrophobic protein (ORF2), putative heat shock protein 70 (ORF3), 63 kDa putative cell to cell movemennt protein (ORF4), minor capsid protein (CPm), major capsid protein (CP), 19 kDa protein (ORF7), and 24 kDa protein (ORF8) genes, complete cds

Sequence ID: JX513891.1 Length: 16489 Number of Matches: 14

Range 1: 5972 to 6409 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
203.1 bits(437) 0.0 94/146(64%) 0/146(0%) Minus/Plus
Query      448  VREYVQRLLKDRMRSLGLSNEHVVSSFAEMVPLLLRDKLSGTFLDRAISSLKWWSETCLSADRREKLFALACIVVLGFPFFIRYIGGVACDNXXXXXXXXXXXLKVIFKRWCDAVAFGYHRLFHCDEDGDSTSSGLKGGGSQSFLW  885
                VR+YV+  LK RMR LGL NEHVV+SF E+VPLLLR+KLS TF+ RA+   KW  E CLSA+RREK FAL C+V LGFP+F R +GGV CD LLSS RR  DR+ V  K  CDA   G   LFH D +GDSTS+GLKGGGSQ+FLW
Subject   5972  VRKYVKNFLKSRMRGLGLRNEHVVNSFGELVPLLLRNKLSETFIYRAVPMSKWCWEVCLSAERREKFFALVCLVTLGFPYFARLLGGVVCDKLLSSLRRAYDRVIVFLKERCDAAMNGLRCLFHFDGNGDSTSAGLKGGGSQTFLW  6409

Range 2: 6452 to 6766 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
181.6 bits(390) 0.0 70/105(67%) 0/105(0%) Minus/Plus
Query       91  WAGCKCVYSHYNIFFLCVSLVEEVNVIARVVGGFSFISRPVSSVLALLLLQPERCVDYSGKLATAFSFLFGISPRVPLLVKKFFEWITRSSLLKSIRRFLRVVAV  405
                +AGCKCV+SH+N+FFLCVSLVEEVN+IA+++GG SF SRP+SS LA +LLQPER V+YSGKL+T F F   ISPRVPL +K FFEW+  + LL+ +RRFLR++AV
Subject   6452  YAGCKCVFSHHNLFFLCVSLVEEVNMIAKILGGLSFFSRPISSALAFVLLQPERFVEYSGKLSTTFLFFLKISPRVPLKIKGFFEWVAGNPLLRGVRRFLRLIAV  6766

Range 3: 6815 to 6850 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.0 bits(57) 0.0 11/12(92%) 0/12(0%) Minus/Plus
Query        7  YPCQRAVPVIPS  42
                YP QRAVPVIPS
Subject   6815  YPSQRAVPVIPS  6850

Range 4: 5971 to 6747 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
288.8 bits(624) 0.0 142/259(55%) 0/259(0%) Plus/Minus
Query      110  NLRILFSRELRVIHSKNFFTKSGTRGEIPKRNENAVANFPE*STHLSG*RRSSASTEETGREMKEKPPTTLAITFTSSTNETQRKNML*CE*THLQPAQLKESARRDMRINRHQRNDCEPPPFKPLDVESPSSSQWNKR**PNATASHHLLKITFXXXXXXXXXXXXLSHATPPI*RMKNGKPNTTIHARAKSFSLRSADRQVSDHHFSEEIARSRNVPDNLSRRSSGTISAKELTTCSLLNPKLRMRSFKSL*TYSRT  886
                NLR   +R L   HSKN     GTRGEI ++N+  V NFPE ST+LSG +R++AS ++ GRE  +KPP   AI FTSST ET +KN L CE THLQPA  K+SA+R  R N+  RN CEPPPFKP DVESP  S+ NK+  P   ASH   + T  RS  RR +D+ LSH TPP  R K G P  T H  AK+FS RSAD+  S HHF    AR   V DNL R+SSGT S  E TTCS L PK RMR FK   TY RT
Subject   5971  NLRTPLNRGLPATHSKNPLILRGTRGEILRKNKKVVLNFPEYSTNLSGCKRTNASADDIGREKNDKPPRIFAIMFTSSTKETHKKNRLWCEKTHLQPA*PKDSAKRTKRNNKPHRNVCEPPPFKPADVESPFPSK*NKQRNPFMAASHRSFRKTITRSYARRNEDKSLSHTTPPKRRAK*GNPRVTKHTSAKNFSRRSADKHTSQHHFDMGTAR*MKVSDNLFRKSSGTNSPNEFTTCSFLRPKPRMRLFKKFLTYLRT  6747

Range 5: 6817 to 6852 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
26.7 bits(52) 0.0 9/12(75%) 0/12(0%) Plus/Minus
Query        5  VDGMTGTALWHG  40
                +DG+TGTALW G
Subject   6817  LDGITGTALWLG  6852

Range 6: 5972 to 6250 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.7 bits(161) 0.0 36/93(39%) 0/93(0%) Plus/Minus
Query      607  KIITRHPAYITYEKRKAQHDYTRESEEFLSSISRQASFRPPFQ*GDRSIQKRPRQLIP*K*WHHLRKRTHHVFVT*P*ATHAIL*KSLNIFTH  885
                ++I  +P   T E  K+Q D   E E+    +S QA F  P + GDR+I +  RQL+ *+ WH L +R H++FV+*    HA  *K  N+  H
Subject   5972  ELIAHYPTQKTSEVGKSQSD*AHEREKLFPPLS*QAHFPAPLRHGDRTIDESFRQLVS*EQWHQLPERIHYMFVS*TQTAHATF*KVFNVLAH  6250

Range 7: 6584 to 6847 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.3 bits(158) 0.0 38/88(43%) 0/88(0%) Plus/Minus
Query       10  WYDRHSSLARITPTLCPETSLLSKVQFHCNYAKKPSNTL*QRAACYPLKKLFH*KWYARRDSEKKRKCRS*LSGVVDTPFGLKEKQRQ  273
                WY+RH  LA +T     ++SL SKVQ H + AK+  N    R   YPL+K F  + +ARR+ EKK+K R+ LS V++ P GL + + Q
Subject   6584  WYNRHGPLAGVTTISRSQSSLPSKVQLHRDQAKESPNAPQ*RITGYPLEKPFDLERHARRNFEKKQKSRAQLSRVLNEPLGL*KNECQ  6847

Range 8: 6263 to 6562 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.5 bits(154) 0.0 44/100(44%) 0/100(0%) Plus/Minus
Query      295  DERETPDNSRDNVYLLD**DAKKEYVVVRVNALTTCPTQGKRETRHAH*QAPKKRLRASTF*TTRCRIAILITMEQTMIAERNSITPPLKDHLQSVRQSS  594
                +ER+TP N RD+V+L +* DA ++ +VVR NALTT   Q  R+T    *QAP KRLRA+  *T RC I I + M+ T       +T  L  +  +V ++S
Subject   6263  EERQTP*NFRDHVHLFN*GDA*EK*IVVRENALTTRVAQR*RKTH*T**QAP*KRLRATAL*TGRCGITIPVKMK*TTQPIHGCVTSLL*KNYHTVVRTS  6562

Range 9: 6334 to 6849 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
109.2 bits(232) 0.0 68/172(40%) 0/172(0%) Minus/Plus
Query        8  FVPL**GWRFYIEWFKRWRLAIVSLVPVNAHVASRAFLELGRL*VRLLALQHILSLRLISRGGKRYRESCRGFLFHLAAGFFCAGAASPSTRKVCRLLRKVSYGIFVSFRNLSARTTFSEKVF*VDNTQLSAKEYSKVSSRSCSETEPSKEERSRGKGWGLSVPKSCAGHTI  523
                F+  *  W F+I  FK   LA VS+  V    A  A   L  L*VR LA Q I  +RL+S  G+  RE+ RGF+  L      AG  S + R+V  +L KV +  FV  +N S+R +  ++VF V +   S +  S++ S    E EPSKEER+  + W L  PK  AG+TI
Subject   6334  FISF*REW*FHICRFKGRWLANVSMGLVITFSAFCAIFGLRGL*VRFLAPQSIFLMRLLS*RGEHDRENSRGFVVLLTTNIISAGIRSFTAREVR*VLWKVEHDFFVFSQNFSSRASQDQRVFRVGSR*SSIEGRSEIPSLDRGEAEPSKEERTENEKWWLPQPKGRAGYTI  6849

Range 10: 5973 to 6233 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.3 bits(123) 0.0 34/87(39%) 0/87(0%) Minus/Plus
Query      624  CVNMFKDF*RIACVA*G*VTNTW*VLLRRWCHYFYGISCRGRFWIERSPH*NGGRKLACRLIEERNSSLSRV*SCWAFRFSYVI*AG  884
                C +  K F*++AC    * TN  *+    WCH  Y  SC     I RSP  +G  K AC+L   ++ S S  *S W F  S V   G
Subject   5973  CASTLKTF*KVACAVWV*ETNM**IRSGSWCHCSYETSCLKLSSIVRSPCRSGAGKCACQLSGGKSFSRSCA*SLWDFPTSLVFWVG  6233

Range 11: 5988 to 6491 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
93.2 bits(197) 0.0 60/168(36%) 0/168(0%) Plus/Minus
Query      366  ICCSASKRTYNLPNSRKARDATCALTGTKETIASLHLLNHSM*NRHPHHNGTNDDSRTQQHHTTS*RSPSIGQTIVEKMIEDYHTPPRLYNV*KTESPTRLYTRERRVSLFDQPTGKFPTTISVRRSLDPETSPTTYPVEVVAPSPQKNSPRVRYLTLSYACDPLKVF  869
                I C A KRTYN  + + A++A   +T   ET AS   LN  M N H   N  N+ + +   H       S G+T V      Y T P   +    E P  L TR R+     Q T   P+T S     D     TT  V  VAP+P+ NS  VR+L  + ACD LK F
Subject   5988  IDCGARKRTYNPRSPKIAQNALNVITSPIETFASHRPLNRQMWNHHSRQNEINNATHSWLRHIAPLEKLSHGRTHVVMKTRAYRTLPHPKDERSREIPE*LSTRARKTFPAAQLTSTLPSTTSTWGPHDR*KFQTTCFVRAVAPTPRTNSLHVRFLDPNRACDFLKSF  6491

Range 12: 6594 to 6848 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.4 bits(108) 0.0 35/85(41%) 0/85(0%) Plus/Minus
Query        9  MV*PAQLFGTDNPHPLPRDLSSFEGSVSLQLREETFEYSLAESCVLSTQKTFSLKVVRAERFRKETKMP*LTFRSSRHTFRVEGE  263
                MV*PA+ FG  N H     LSSFEGS S +  E   E    E   L T+KT      R E+F ++TK    TF+S++ T R   E
Subject   6594  MV*PARPFGWGNHHFSFSVLSSFEGSASPRSSEGISERPSIEDYRLPTRKTL*S*EAREEKF*EKTKKSCSTFQSTQRTSRAVKE  6848

Range 13: 6546 to 6848 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.0 bits(140) 0.0 44/101(44%) 0/101(0%) Minus/Plus
Query        9  GVSLSSRGRFLLCWRCFSFNPKGVSTTPES*LRHFRFFSESLRAYHF**KSFLSG*HAALC*RVFEGFFA*LQ*N*TFERREVSGQRVGVIRAKELCRSYH  311
                GV  SS  ++   W  F ++P+G  +T ES* R F FFS+ L A     K F SG*   L *  F   FA* +*+*TFE RE   + + V  AK  CR YH
Subject   6546  GVCRSSHDQYHQRWHSFFYSPRGSLSTLES*ARLFCFFSKFLLACLSRSKGFSSG*PVILY*GAFGDSFA*SR*S*TFEGRED*EREMVVTPAKGPCRLYH  6848

Range 14: 6330 to 6506 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.6 bits(102) 0.0 27/59(46%) 0/59(0%) Minus/Plus
Query      351  IVCSIVMRMAILHRVV*KVEARNRFFGAC*CACRVSRFP*VGQVVSAFTRTTTYSFFAS  527
                +V  I+  M I H  V*+  AR RF+GAC     V R+    +VVSAF+RTT Y  +AS
Subject   6330  VVYFILTGMVIPHLPV*RAVARKRFYGACYYV*CVLRYLWATRVVSAFSRTTIYFSYAS  6506

Grapevine rootstock stem lesion associated virus, complete genome

Sequence ID: NC_004724.1 Length: 16527 Number of Matches: 14

Range 1: 5984 to 6421 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
203.1 bits(437) 0.0 93/146(64%) 0/146(0%) Minus/Plus
Query      448  VREYVQRLLKDRMRSLGLSNEHVVSSFAEMVPLLLRDKLSGTFLDRAISSLKWWSETCLSADRREKLFALACIVVLGFPFFIRYIGGVACDNXXXXXXXXXXXLKVIFKRWCDAVAFGYHRLFHCDEDGDSTSSGLKGGGSQSFLW  885
                VR+YV+  LK RMR LGL NEHVV+SF E+VPLLLR+KLS TF+ RA+   KW  + CLSA+RREK FAL C+V LGFP+F R++GGV CD LLSS RR  DR+ V  K  CDA   G   LFH D +GDSTS+GLKGGGSQ+FLW
Subject   5984  VRKYVKNFLKSRMRGLGLRNEHVVNSFGELVPLLLRNKLSETFIYRAVPMSKWCWKVCLSAERREKFFALVCLVTLGFPYFARFLGGVVCDKLLSSLRRAYDRVIVFLKERCDAAMNGLRCLFHFDGNGDSTSAGLKGGGSQTFLW  6421

Range 2: 6464 to 6778 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
175.6 bits(377) 0.0 69/105(66%) 0/105(0%) Minus/Plus
Query       91  WAGCKCVYSHYNIFFLCVSLVEEVNVIARVVGGFSFISRPVSSVLALLLLQPERCVDYSGKLATAFSFLFGISPRVPLLVKKFFEWITRSSLLKSIRRFLRVVAV  405
                +AGCKCV+SH+++FFLCVSLVEEVN+IA+++G  SF SRP+SS LA  LLQPER V+YSGKL+T F F   ISPRVPL +K FFEW+  S LL+ +RRFLR++AV
Subject   6464  YAGCKCVFSHHDLFFLCVSLVEEVNMIAKILGCLSFFSRPISSALAFALLQPERFVEYSGKLSTTFLFFLKISPRVPLKIKGFFEWVAGSPLLRGVRRFLRLIAV  6778

Range 3: 6827 to 6862 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.0 bits(57) 0.0 11/12(92%) 0/12(0%) Minus/Plus
Query        7  YPCQRAVPVIPS  42
                YP QRAVPVIPS
Subject   6827  YPSQRAVPVIPS  6862

Range 4: 5983 to 6759 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
279.2 bits(603) 0.0 139/259(54%) 0/259(0%) Plus/Minus
Query      110  NLRILFSRELRVIHSKNFFTKSGTRGEIPKRNENAVANFPE*STHLSG*RRSSASTEETGREMKEKPPTTLAITFTSSTNETQRKNML*CE*THLQPAQLKESARRDMRINRHQRNDCEPPPFKPLDVESPSSSQWNKR**PNATASHHLLKITFXXXXXXXXXXXXLSHATPPI*RMKNGKPNTTIHARAKSFSLRSADRQVSDHHFSEEIARSRNVPDNLSRRSSGTISAKELTTCSLLNPKLRMRSFKSL*TYSRT  886
                NLR   +R L   HSKN     GTRGEI ++N+  V NFPE ST+LSG +R++AS ++ GRE  +K P   AI FTSST ET +KN   CE THLQPA  K+SA+R  R N+  RN CEPPPFKP DVESP  S+ NK+  P   ASH   + T  RS  RR +D+ LSH TPP  R K G P  T H  AK+FS RSAD+    HHF    AR   V DNL R+SSGT S  E TTCS L PK RMR FK   TY RT
Subject   5983  NLRTPLNRGLPATHSKNPLILRGTRGEILRKNKKVVLNFPEYSTNLSGCKRANASADDIGREKNDKHPRIFAIMFTSSTKETHKKNRSWCEKTHLQPA*PKDSAKRTKRNNKPHRNVCEPPPFKPADVESPFPSK*NKQRNPFMAASHRSFRKTITRSYARRNEDKSLSHTTPPKKRAK*GNPRVTKHTSAKNFSRRSADKHTFQHHFDMGTAR*MKVSDNLFRKSSGTNSPNEFTTCSFLRPKPRMRLFKKFLTYLRT  6759

Range 5: 6829 to 6864 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
26.7 bits(52) 0.0 9/12(75%) 0/12(0%) Plus/Minus
Query        5  VDGMTGTALWHG  40
                +DG+TGTALW G
Subject   6829  LDGITGTALWLG  6864

Range 6: 5984 to 6262 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.7 bits(161) 0.0 36/93(39%) 0/93(0%) Plus/Minus
Query      607  KIITRHPAYITYEKRKAQHDYTRESEEFLSSISRQASFRPPFQ*GDRSIQKRPRQLIP*K*WHHLRKRTHHVFVT*P*ATHAIL*KSLNIFTH  885
                ++I  +P   T E  K+Q D   E E+    +S QA F  P + GDR+I +  RQL+ *+ WH L +R H++FV+*    HA  *K  N+  H
Subject   5984  ELIAHYPTQKTSEVGKSQSD*AHEREKLFPPLS*QAHFPAPLRHGDRTIDESFRQLVS*EQWHQLPERIHYMFVS*TQTAHATF*KVFNVLAH  6262

Range 7: 6596 to 6859 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.5 bits(154) 0.0 37/88(42%) 0/88(0%) Plus/Minus
Query       10  WYDRHSSLARITPTLCPETSLLSKVQFHCNYAKKPSNTL*QRAACYPLKKLFH*KWYARRDSEKKRKCRS*LSGVVDTPFGLKEKQRQ  273
                WY+RH  LA +T     ++SL SKVQ H + AK+  N    R   +PL+K F  + +ARR+ EKK+K R+ LS V++ P GL + + Q
Subject   6596  WYNRHGPLAGVTTISRSQSSLPSKVQLHRDQAKESPNAPQ*RTTGHPLEKPFDLERHARRNFEKKQKSRAQLSRVLNEPLGL*KSECQ  6859

Range 8: 6275 to 6574 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.5 bits(154) 0.0 44/100(44%) 0/100(0%) Plus/Minus
Query      295  DERETPDNSRDNVYLLD**DAKKEYVVVRVNALTTCPTQGKRETRHAH*QAPKKRLRASTF*TTRCRIAILITMEQTMIAERNSITPPLKDHLQSVRQSS  594
                +ER+TP N RD+V+L +* DA ++ +VVR NALTT   Q  R+T    *QAP KRLRA+  *T RC I I + M+ T       +T  L  +  +V ++S
Subject   6275  EERQTP*NFRDHVHLFN*GDA*EK*IVVRENALTTRVAQR*RKTH*T**QAP*KRLRATAL*TGRCGITIPVKMK*TTQPIHGCVTSLL*KNYHTVVRTS  6574

Range 9: 6346 to 6861 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
102.8 bits(218) 0.0 66/172(38%) 0/172(0%) Minus/Plus
Query        8  FVPL**GWRFYIEWFKRWRLAIVSLVPVNAHVASRAFLELGRL*VRLLALQHILSLRLISRGGKRYRESCRGFLFHLAAGFFCAGAASPSTRKVCRLLRKVSYGIFVSFRNLSARTTFSEKVF*VDNTQLSAKEYSKVSSRSCSETEPSKEERSRGKGWGLSVPKSCAGHTI  523
                F+  *  W F+I  FK   LA VS+  V    A  A   L  L*VR LA + I  +RL+S  G+  RE+ R F+  L      AG  S + R+V  +L KV +  FV  +N S+R +  ++VF V     S +  S++ S    E EPSKEER+  + W L  PK  AG+TI
Subject   6346  FISF*REW*FHICRFKGRWLANVSMGLVITFSAFCAIFGLRGL*VRFLAPRSIFLMRLLS*RGEHDRENSRVFVVLLTTNIISAGIRSFTAREVR*VLWKVEHDFFVFSQNFSSRASQDQRVFRVGGR*SSIEGRSEIPSLDRGEAEPSKEERTENEKWWLPQPKGRAGYTI  6861

Range 10: 5985 to 6245 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.3 bits(123) 0.0 34/87(39%) 0/87(0%) Minus/Plus
Query      624  CVNMFKDF*RIACVA*G*VTNTW*VLLRRWCHYFYGISCRGRFWIERSPH*NGGRKLACRLIEERNSSLSRV*SCWAFRFSYVI*AG  884
                C +  K F*++AC    * TN  *+    WCH  Y  SC     I RSP  +G  K AC+L   ++ S S  *S W F  S V   G
Subject   5985  CASTLKTF*KVACAVWV*ETNM**IRSGSWCHCSYETSCLKLSSIVRSPCRSGAGKCACQLSGGKSFSRSCA*SLWDFPTSLVFWVG  6245

Range 11: 6000 to 6491 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
87.2 bits(184) 0.0 58/164(35%) 0/164(0%) Plus/Minus
Query      378  ASKRTYNLPNSRKARDATCALTGTKETIASLHLLNHSM*NRHPHHNGTNDDSRTQQHHTTS*RSPSIGQTIVEKMIEDYHTPPRLYNV*KTESPTRLYTRERRVSLFDQPTGKFPTTISVRRSLDPETSPTTYPVEVVAPSPQKNSPRVRYLTLSYACDPLKVF  869
                A KRTYN  + + A++A   +T   ET AS   LN  M N H   N  N+ + +   H       S G+T V      Y T P   N    E P  L TR R+     Q T    +T S     D     TT  V  VAP+P+ NS  VR+L  + ACD LK F
Subject   6000  ARKRTYNPRSPKIAQNALNVITSPIETFASHRPLNRQMWNHHSRQNEINNATHSWLRHIAPLEKLSHGRTHVVMKTRAYRTLPHPKNERSREIPE*LSTRARKTFPAAQLTSTLSSTTSTWGPHDR*KFQTTCFVRAVAPTPRTNSLHVRFLDPNRACDFLKSF  6491

Range 12: 6606 to 6860 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.2 bits(101) 0.0 34/85(40%) 0/85(0%) Plus/Minus
Query        9  MV*PAQLFGTDNPHPLPRDLSSFEGSVSLQLREETFEYSLAESCVLSTQKTFSLKVVRAERFRKETKMP*LTFRSSRHTFRVEGE  263
                MV*PA+ FG  N H     LSSFEGS S +  E   E    E     T+KT      R E+F ++TK    TF+S++ T R   E
Subject   6606  MV*PARPFGWGNHHFSFSVLSSFEGSASPRSSEGISERPSIEDYRPPTRKTL*S*EAREEKF*EKTKKSCSTFQSTQRTSRAVKE  6860

Range 13: 6558 to 6860 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.5 bits(130) 0.0 42/101(42%) 0/101(0%) Minus/Plus
Query        9  GVSLSSRGRFLLCWRCFSFNPKGVSTTPES*LRHFRFFSESLRAYHF**KSFLSG*HAALC*RVFEGFFA*LQ*N*TFERREVSGQRVGVIRAKELCRSYH  311
                GV  SS  ++   W    ++P+G  +T ES* R F FFS+ L A     K F SG    L *  F   FA* +*+*TFE RE   + + V  AK  CR YH
Subject   6558  GVCRSSHDQYHQRWHSLFYSPRGSLSTLES*ARLFCFFSKFLLACLSRSKGFSSGWPVVLY*GAFGDSFA*SR*S*TFEGRED*EREMVVTPAKGPCRLYH  6860

Range 14: 6342 to 6518 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.6 bits(102) 0.0 27/59(46%) 0/59(0%) Minus/Plus
Query      351  IVCSIVMRMAILHRVV*KVEARNRFFGAC*CACRVSRFP*VGQVVSAFTRTTTYSFFAS  527
                +V  I+  M I H  V*+  AR RF+GAC     V R+    +VVSAF+RTT Y  +AS
Subject   6342  VVYFILTGMVIPHLPV*RAVARKRFYGACYYV*CVLRYLWATRVVSAFSRTTIYFSYAS  6518

Grapevine rootstock stem lesion associated virus methyltransferase/helicase polyprotein, RNA dependent RNA polymerase, p6, HSP70 like protein, HSP90 like protein, coat protein duplicate, coat protein, p19, and p24 genes, complete cds

Sequence ID: AF314061.1 Length: 16527 Number of Matches: 14

Range 1: 5984 to 6421 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
203.1 bits(437) 0.0 93/146(64%) 0/146(0%) Minus/Plus
Query      448  VREYVQRLLKDRMRSLGLSNEHVVSSFAEMVPLLLRDKLSGTFLDRAISSLKWWSETCLSADRREKLFALACIVVLGFPFFIRYIGGVACDNXXXXXXXXXXXLKVIFKRWCDAVAFGYHRLFHCDEDGDSTSSGLKGGGSQSFLW  885
                VR+YV+  LK RMR LGL NEHVV+SF E+VPLLLR+KLS TF+ RA+   KW  + CLSA+RREK FAL C+V LGFP+F R++GGV CD LLSS RR  DR+ V  K  CDA   G   LFH D +GDSTS+GLKGGGSQ+FLW
Subject   5984  VRKYVKNFLKSRMRGLGLRNEHVVNSFGELVPLLLRNKLSETFIYRAVPMSKWCWKVCLSAERREKFFALVCLVTLGFPYFARFLGGVVCDKLLSSLRRAYDRVIVFLKERCDAAMNGLRCLFHFDGNGDSTSAGLKGGGSQTFLW  6421

Range 2: 6464 to 6778 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
175.6 bits(377) 0.0 69/105(66%) 0/105(0%) Minus/Plus
Query       91  WAGCKCVYSHYNIFFLCVSLVEEVNVIARVVGGFSFISRPVSSVLALLLLQPERCVDYSGKLATAFSFLFGISPRVPLLVKKFFEWITRSSLLKSIRRFLRVVAV  405
                +AGCKCV+SH+++FFLCVSLVEEVN+IA+++G  SF SRP+SS LA  LLQPER V+YSGKL+T F F   ISPRVPL +K FFEW+  S LL+ +RRFLR++AV
Subject   6464  YAGCKCVFSHHDLFFLCVSLVEEVNMIAKILGCLSFFSRPISSALAFALLQPERFVEYSGKLSTTFLFFLKISPRVPLKIKGFFEWVAGSPLLRGVRRFLRLIAV  6778

Range 3: 6827 to 6862 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.0 bits(57) 0.0 11/12(92%) 0/12(0%) Minus/Plus
Query        7  YPCQRAVPVIPS  42
                YP QRAVPVIPS
Subject   6827  YPSQRAVPVIPS  6862

Range 4: 5983 to 6759 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
279.2 bits(603) 0.0 139/259(54%) 0/259(0%) Plus/Minus
Query      110  NLRILFSRELRVIHSKNFFTKSGTRGEIPKRNENAVANFPE*STHLSG*RRSSASTEETGREMKEKPPTTLAITFTSSTNETQRKNML*CE*THLQPAQLKESARRDMRINRHQRNDCEPPPFKPLDVESPSSSQWNKR**PNATASHHLLKITFXXXXXXXXXXXXLSHATPPI*RMKNGKPNTTIHARAKSFSLRSADRQVSDHHFSEEIARSRNVPDNLSRRSSGTISAKELTTCSLLNPKLRMRSFKSL*TYSRT  886
                NLR   +R L   HSKN     GTRGEI ++N+  V NFPE ST+LSG +R++AS ++ GRE  +K P   AI FTSST ET +KN   CE THLQPA  K+SA+R  R N+  RN CEPPPFKP DVESP  S+ NK+  P   ASH   + T  RS  RR +D+ LSH TPP  R K G P  T H  AK+FS RSAD+    HHF    AR   V DNL R+SSGT S  E TTCS L PK RMR FK   TY RT
Subject   5983  NLRTPLNRGLPATHSKNPLILRGTRGEILRKNKKVVLNFPEYSTNLSGCKRANASADDIGREKNDKHPRIFAIMFTSSTKETHKKNRSWCEKTHLQPA*PKDSAKRTKRNNKPHRNVCEPPPFKPADVESPFPSK*NKQRNPFMAASHRSFRKTITRSYARRNEDKSLSHTTPPKKRAK*GNPRVTKHTSAKNFSRRSADKHTFQHHFDMGTAR*MKVSDNLFRKSSGTNSPNEFTTCSFLRPKPRMRLFKKFLTYLRT  6759

Range 5: 6829 to 6864 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
26.7 bits(52) 0.0 9/12(75%) 0/12(0%) Plus/Minus
Query        5  VDGMTGTALWHG  40
                +DG+TGTALW G
Subject   6829  LDGITGTALWLG  6864

Range 6: 5984 to 6262 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.7 bits(161) 0.0 36/93(39%) 0/93(0%) Plus/Minus
Query      607  KIITRHPAYITYEKRKAQHDYTRESEEFLSSISRQASFRPPFQ*GDRSIQKRPRQLIP*K*WHHLRKRTHHVFVT*P*ATHAIL*KSLNIFTH  885
                ++I  +P   T E  K+Q D   E E+    +S QA F  P + GDR+I +  RQL+ *+ WH L +R H++FV+*    HA  *K  N+  H
Subject   5984  ELIAHYPTQKTSEVGKSQSD*AHEREKLFPPLS*QAHFPAPLRHGDRTIDESFRQLVS*EQWHQLPERIHYMFVS*TQTAHATF*KVFNVLAH  6262

Range 7: 6596 to 6859 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.5 bits(154) 0.0 37/88(42%) 0/88(0%) Plus/Minus
Query       10  WYDRHSSLARITPTLCPETSLLSKVQFHCNYAKKPSNTL*QRAACYPLKKLFH*KWYARRDSEKKRKCRS*LSGVVDTPFGLKEKQRQ  273
                WY+RH  LA +T     ++SL SKVQ H + AK+  N    R   +PL+K F  + +ARR+ EKK+K R+ LS V++ P GL + + Q
Subject   6596  WYNRHGPLAGVTTISRSQSSLPSKVQLHRDQAKESPNAPQ*RTTGHPLEKPFDLERHARRNFEKKQKSRAQLSRVLNEPLGL*KSECQ  6859

Range 8: 6275 to 6574 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.5 bits(154) 0.0 44/100(44%) 0/100(0%) Plus/Minus
Query      295  DERETPDNSRDNVYLLD**DAKKEYVVVRVNALTTCPTQGKRETRHAH*QAPKKRLRASTF*TTRCRIAILITMEQTMIAERNSITPPLKDHLQSVRQSS  594
                +ER+TP N RD+V+L +* DA ++ +VVR NALTT   Q  R+T    *QAP KRLRA+  *T RC I I + M+ T       +T  L  +  +V ++S
Subject   6275  EERQTP*NFRDHVHLFN*GDA*EK*IVVRENALTTRVAQR*RKTH*T**QAP*KRLRATAL*TGRCGITIPVKMK*TTQPIHGCVTSLL*KNYHTVVRTS  6574

Range 9: 6346 to 6861 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
102.8 bits(218) 0.0 66/172(38%) 0/172(0%) Minus/Plus
Query        8  FVPL**GWRFYIEWFKRWRLAIVSLVPVNAHVASRAFLELGRL*VRLLALQHILSLRLISRGGKRYRESCRGFLFHLAAGFFCAGAASPSTRKVCRLLRKVSYGIFVSFRNLSARTTFSEKVF*VDNTQLSAKEYSKVSSRSCSETEPSKEERSRGKGWGLSVPKSCAGHTI  523
                F+  *  W F+I  FK   LA VS+  V    A  A   L  L*VR LA + I  +RL+S  G+  RE+ R F+  L      AG  S + R+V  +L KV +  FV  +N S+R +  ++VF V     S +  S++ S    E EPSKEER+  + W L  PK  AG+TI
Subject   6346  FISF*REW*FHICRFKGRWLANVSMGLVITFSAFCAIFGLRGL*VRFLAPRSIFLMRLLS*RGEHDRENSRVFVVLLTTNIISAGIRSFTAREVR*VLWKVEHDFFVFSQNFSSRASQDQRVFRVGGR*SSIEGRSEIPSLDRGEAEPSKEERTENEKWWLPQPKGRAGYTI  6861

Range 10: 5985 to 6245 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.3 bits(123) 0.0 34/87(39%) 0/87(0%) Minus/Plus
Query      624  CVNMFKDF*RIACVA*G*VTNTW*VLLRRWCHYFYGISCRGRFWIERSPH*NGGRKLACRLIEERNSSLSRV*SCWAFRFSYVI*AG  884
                C +  K F*++AC    * TN  *+    WCH  Y  SC     I RSP  +G  K AC+L   ++ S S  *S W F  S V   G
Subject   5985  CASTLKTF*KVACAVWV*ETNM**IRSGSWCHCSYETSCLKLSSIVRSPCRSGAGKCACQLSGGKSFSRSCA*SLWDFPTSLVFWVG  6245

Range 11: 6000 to 6491 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
87.2 bits(184) 0.0 58/164(35%) 0/164(0%) Plus/Minus
Query      378  ASKRTYNLPNSRKARDATCALTGTKETIASLHLLNHSM*NRHPHHNGTNDDSRTQQHHTTS*RSPSIGQTIVEKMIEDYHTPPRLYNV*KTESPTRLYTRERRVSLFDQPTGKFPTTISVRRSLDPETSPTTYPVEVVAPSPQKNSPRVRYLTLSYACDPLKVF  869
                A KRTYN  + + A++A   +T   ET AS   LN  M N H   N  N+ + +   H       S G+T V      Y T P   N    E P  L TR R+     Q T    +T S     D     TT  V  VAP+P+ NS  VR+L  + ACD LK F
Subject   6000  ARKRTYNPRSPKIAQNALNVITSPIETFASHRPLNRQMWNHHSRQNEINNATHSWLRHIAPLEKLSHGRTHVVMKTRAYRTLPHPKNERSREIPE*LSTRARKTFPAAQLTSTLSSTTSTWGPHDR*KFQTTCFVRAVAPTPRTNSLHVRFLDPNRACDFLKSF  6491

Range 12: 6606 to 6860 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.2 bits(101) 0.0 34/85(40%) 0/85(0%) Plus/Minus
Query        9  MV*PAQLFGTDNPHPLPRDLSSFEGSVSLQLREETFEYSLAESCVLSTQKTFSLKVVRAERFRKETKMP*LTFRSSRHTFRVEGE  263
                MV*PA+ FG  N H     LSSFEGS S +  E   E    E     T+KT      R E+F ++TK    TF+S++ T R   E
Subject   6606  MV*PARPFGWGNHHFSFSVLSSFEGSASPRSSEGISERPSIEDYRPPTRKTL*S*EAREEKF*EKTKKSCSTFQSTQRTSRAVKE  6860

Range 13: 6558 to 6860 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.5 bits(130) 0.0 42/101(42%) 0/101(0%) Minus/Plus
Query        9  GVSLSSRGRFLLCWRCFSFNPKGVSTTPES*LRHFRFFSESLRAYHF**KSFLSG*HAALC*RVFEGFFA*LQ*N*TFERREVSGQRVGVIRAKELCRSYH  311
                GV  SS  ++   W    ++P+G  +T ES* R F FFS+ L A     K F SG    L *  F   FA* +*+*TFE RE   + + V  AK  CR YH
Subject   6558  GVCRSSHDQYHQRWHSLFYSPRGSLSTLES*ARLFCFFSKFLLACLSRSKGFSSGWPVVLY*GAFGDSFA*SR*S*TFEGRED*EREMVVTPAKGPCRLYH  6860

Range 14: 6342 to 6518 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.6 bits(102) 0.0 27/59(46%) 0/59(0%) Minus/Plus
Query      351  IVCSIVMRMAILHRVV*KVEARNRFFGAC*CACRVSRFP*VGQVVSAFTRTTTYSFFAS  527
                +V  I+  M I H  V*+  AR RF+GAC     V R+    +VVSAF+RTT Y  +AS
Subject   6342  VVYFILTGMVIPHLPV*RAVARKRFYGACYYV*CVLRYLWATRVVSAFSRTTIYFSYAS  6518

Grapevine leafroll associated virus 2 methyltransferase/helicase polyprotein gene, partial cds; and RNA dependent RNA polymerase, putative transmembrane small hydrophobic protein, 65 kDa chaperone protein, 63 kDa protein, 25 kDa diverged coat protein, 22 kDa coat protein, 19 kDa protein, and 24 kDa protein genes, complete cds

Sequence ID: AF039204.1 Length: 15000 Number of Matches: 7

Range 1: 4505 to 4942 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.5 bits(309) 0.0 68/146(47%) 0/146(0%) Minus/Plus
Query      448  VREYVQRLLKDRMRSLGLSNEHVVSSFAEMVPLLLRDKLSGTFLDRAISSLKWWSETCLSADRREKLFALACIVVLGFPFFIRYIGGVACDNXXXXXXXXXXXLKVIFKRWCDAVAFGYHRLFHCDEDGDSTSSGLKGGGSQSFLW  885
                VREY QR L+ RMR+LGL+NE VV SFA+++P L++ K+SG+FL      L+ +S  C+SA+RREK FAL C++ L  PFF+R +G  AC+ L+SS RR  +R+K+  ++   +++  +  LF  D D  S S+GLKGG S+  L+
Subject   4505  VREYTQRFLRSRMRALGLNNEFVVKSFADLLPALMKRKVSGSFLASVYRPLRGFSYMCVSAERREKFFALVCLIGLSLPFFVRIVGAKACEELVSSARRFYERIKIFLRQKYVSLSNFFCHLFSSDVDDSSASAGLKGGASRMTLF  4942

Range 2: 4985 to 5287 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
131.2 bits(280) 0.0 51/101(50%) 0/101(0%) Minus/Plus
Query      103  WAGCKCVYSHYNIFFLCVSLVEEVNVIARVVGGFSFISRPVSSVLALLLLQPERCVDYSGKLATAFSFLFGISPRVPLLVKKFFEWITRSSLLKSIRRFLR  405
                W G K + SH+N+ FLC +LV++VNV+ +V+GG SF  +P+ S+ A +LLQP+R V+YS KL TAF F    SPR P L+K FFE +  S++ K++RR LR
Subject   4985  WEGLKLLLSHHNLLFLCFALVDDVNVLIKVLGGLSFFVQPIFSLFAAMLLQPDRFVEYSEKLVTAFEFFLKCSPRAPALLKGFFECVANSTVSKTVRRLLR  5287

Range 3: 4867 to 5280 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
115.2 bits(245) 0.0 57/138(41%) 0/138(0%) Plus/Minus
Query      110  NLRILFSRELRVIHSKNFFTKSGTRGEIPKRNENAVANFPE*STHLSG*RRSSASTEETGREMKEKPPTTLAITFTSSTNETQRKNML*CE*THLQPAQLKESARRDMRINRHQRNDCEPPPFKPLDVESPSSSQWNK  523
                +LR +F   L   HSKN  + +G RGE  K+N NAV +F E ST+LSG R  +A+ E+ G   KE+PP TL  TFTSSTN   + N L C+ +   P+   +      R  R +    + PPF P D E  S+S+ NK
Subject   4867  SLRTVFDTVLFATHSKNPLSSAGARGEHFKKNSNAVTSFSEYSTNLSGCRSIAANKEKIGCTKKERPPRTLIRTFTSSTNAKHKNNKLWCDKSSFNPSHPNDRRALARRTRRWKSVIRDAPPFNPADAELSSTSELNK  5280

Range 4: 4504 to 4776 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.7 bits(161) 0.0 38/91(42%) 0/91(0%) Plus/Minus
Query      614  SHATPPI*RMKNGKPNTTIHARAKSFSLRSADRQVSDHHFSEEIARSRNVPDNLSRRSSGTISAKELTTCSLLNPKLRMRSFKSL*TYSRT  886
                SHA  P  R K G+ N   H RAK+FS RSA+  + +   S     ++N P+     ++G+ SAK+ TT SL  P  RMR  ++L* YSRT
Subject   4504  SHAFAPTMRTKKGRLNPIKHTRAKNFSRRSAETHIYEKPLSGR*TLAKNEPETFRFINAGSKSAKDFTTNSLFKPNARMRLRRNL*VYSRT  4776

Range 5: 4891 to 5325 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.0 bits(118) 0.0 38/145(26%) 0/145(0%) Minus/Plus
Query       65  RFYIEWFKRWRLAIVSLVPVNAHVASRAFLELGRL*VRLLALQHILSLRLISRGGKRYRESCRGFLFHLAAGFFCAGAASPSTRKVCRLLRKVSYGIFVSFRNLSARTTFSEKVF*VDNTQLSAKEYSKVSSRSCSETEPSKEER  499
                +F I   +RW +A  +L P  +       + +GR+   L+A Q ++ +  I    +R  +S  G  F  A   F     + +T +VC + R+  Y + +  +  ++R   +++VF*V   Q   K  SK SS    + + SK  R
Subject   4891  QFRICRVERWCVANDALPPSGSPC*CPPIVRVGRVKATLIAPQLVIFVFCIG*RCERPYQSSWGSFFLCATNLFLVCGDASTTGQVCGVFRETCYSV*IFLKMFASRACTTQRVF*VRGEQHCVKNRSKTSSLFREDAQTSKRAR  5325

Range 6: 4503 to 4583 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
27.2 bits(53) 0.0 11/27(41%) 0/27(0%) Minus/Plus
Query      807  SCVNMFKDF*RIACVA*G*VTNTW*VL  887
                SC ++ +D   +ACV   *+T++W* L
Subject   4503  SCASILRDSSEVACVRWV*ITSSW*NL  4583

Range 7: 5009 to 5377 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.3 bits(121) 0.0 41/123(33%) 0/123(0%) Plus/Minus
Query       13  YDRHSSLARITPTLCPETSLLSKVQFHCNYAKKPSNTL*QRAACYPLKKLFH*KWYARRDSEKKRKCRS*LSGVVDTPFGLKEKQRQHRRNRPRDERETPDNSRDNVYLLD**DAKKEYVVVR  381
                YD +  L   TPT+  + S  SK +     AKK SN  *  A  + LKK F *   ARR   +K K  +   G++  P  L + +R+  ++    ER+TP N   +V++++    +K  VVVR
Subject   5009  YDGYGFLPMETPTIRTQPSPFSKFEHLHETAKKSSNGF*HSAVRHALKKPFE*CRRARRTF*EKFKRCNKFLGILHKPVRL*KHRRKQGKDWLHKERKTPKNFDKDVHIVNQCKTQK*QVVVR  5377

Nucleotide Sequence (353 letters)

Query ID:ds2016-58_48
Query definition:No definition line
Query length:589
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 10 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
36
72
108
144
180
216
252
288
324
353

Descriptions

Alignments

Grapevine leafroll associated virus 2, complete genome

Sequence ID: DQ286725.2 Length: 16535 Number of Matches: 8

Range 1: 7176 to 7523 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
279.2 bits(603) 0.0 114/116(98%) 0/116(0%) Minus/Minus
Query        6  GRTIERPHYRGPSSDQNSQSATDHSKRKVCYGSRREPILACNKIHAPRWSNLQSPYCHPPQSV*EIRNSSLVYSSTRSPSPS*VNHLALR*SKALRPLHRQIKRRCGFHQTQSLPK  353
                GRTIERPHYRGPSSDQNSQSA DHSKRKVCYGSRREPILACNKIHAPRWSNLQSPYCHPPQSV*EIRNSSLVYSSTRSPSPS*VNHLALR*SKALRPLHRQIKRRCGFHQTQSLP+
Subject   7176  GRTIERPHYRGPSSDQNSQSAIDHSKRKVCYGSRREPILACNKIHAPRWSNLQSPYCHPPQSV*EIRNSSLVYSSTRSPSPS*VNHLALR*SKALRPLHRQIKRRCGFHQTQSLPE  7523

Range 2: 7172 to 7522 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
272.8 bits(592) 0.0 116/117(99%) 0/117(0%) Plus/Plus
Query        2  LVWGGTVSDEIRTDALSDDEAVEELSITEERDDSPKTVRVSEYLNRLNSSFEFPKPIVVDDNKETGGLTNAVREFYYMQELALFEIHSKLCAYYDQLRIVNFDRSMAPCNEDAQLYV  352
                LV GGTVSDEIRTDALSDDEAVEELSITEERDDSPKTVRVSEYLNRLNSSFEFPKPIVVDDNKETGGLTNAVREFYYMQELALFEIHSKLCAYYDQLRIVNFDRSMAPCNEDAQLYV
Subject   7172  LVRGGTVSDEIRTDALSDDEAVEELSITEERDDSPKTVRVSEYLNRLNSSFEFPKPIVVDDNKETGGLTNAVREFYYMQELALFEIHSKLCAYYDQLRIVNFDRSMAPCNEDAQLYV  7522

Range 3: 7176 to 7523 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
271.4 bits(586) 0.0 115/116(99%) 0/116(0%) Plus/Plus
Query        6  FGEGLCLMKSAPTLYLTMKRSKSFRSPKSEMIHLRR*G*AST*ID*TRVSNFLNRLWWMTIRRLEV*PTRCVNFITCKNWLSSRSIANFALTMISCGL*ILIARWPPVMRTLNCTS  353
                FGEGLCLMKSAPTLYLTMKRSKSFRSPKSEMIHLRR*G*AST*ID*TRVSNFLNRLWWMTIRRLEV*PTRCVNFITCKNWLSSRSIANFALTMI+CGL*ILIARWPPVMRTLNCTS
Subject   7176  FGEGLCLMKSAPTLYLTMKRSKSFRSPKSEMIHLRR*G*AST*ID*TRVSNFLNRLWWMTIRRLEV*PTRCVNFITCKNWLSSRSIANFALTMINCGL*ILIARWPPVMRTLNCTS  7523

Range 4: 7175 to 7522 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
266.8 bits(576) 0.0 116/116(100%) 0/116(0%) Minus/Minus
Query        5  DVQLSVLITGGHRAIKIHNPQLIIVSAKFAMDLEESQFLHVIKFTHRVGQTSSLLIVIHHNRFRKFETRV*SIQVLAHPHRLR*IISLFGDRKLFDRFIVR*SVGADFIRHSPSPN  352
                DVQLSVLITGGHRAIKIHNPQLIIVSAKFAMDLEESQFLHVIKFTHRVGQTSSLLIVIHHNRFRKFETRV*SIQVLAHPHRLR*IISLFGDRKLFDRFIVR*SVGADFIRHSPSPN
Subject   7175  DVQLSVLITGGHRAIKIHNPQLIIVSAKFAMDLEESQFLHVIKFTHRVGQTSSLLIVIHHNRFRKFETRV*SIQVLAHPHRLR*IISLFGDRKLFDRFIVR*SVGADFIRHSPSPN  7522

Range 5: 7270 to 7521 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
180.7 bits(388) 0.0 84/84(100%) 0/84(0%) Minus/Minus
Query      100  TYN*ASSLQGAIERSKFTIRN*S**AQSLLWISKRANSCM**NSRTALVKPPVSLLSSTTIGLGNSKLEFSLFKYSLTLTVLGE  351
                TYN*ASSLQGAIERSKFTIRN*S**AQSLLWISKRANSCM**NSRTALVKPPVSLLSSTTIGLGNSKLEFSLFKYSLTLTVLGE
Subject   7270  TYN*ASSLQGAIERSKFTIRN*S**AQSLLWISKRANSCM**NSRTALVKPPVSLLSSTTIGLGNSKLEFSLFKYSLTLTVLGE  7521

Range 6: 7171 to 7209 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.5 bits(58) 0.0 11/13(85%) 0/13(0%) Minus/Minus
Query        1  VRISSDTVPPQTR  39
                VRISSDTVPP+T+
Subject   7171  VRISSDTVPPRTK  7209

Range 7: 7282 to 7521 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
173.8 bits(373) 0.0 79/80(99%) 0/80(0%) Plus/Plus
Query      112  GEGERVLE*TKLEFRIS*TDCGG*Q*GDWRFDQRGA*ILLHARIGSLRDP*QTLRLL*SVADCEF*SLDGPL**GRSIVR  351
                GEGERVLE*TKLEFRIS*TDCGG*Q*GDWRFDQRGA*ILLHARIGSLRDP*QTLRLL*S+ADCEF*SLDGPL**GRSIVR
Subject   7282  GEGERVLE*TKLEFRIS*TDCGG*Q*GDWRFDQRGA*ILLHARIGSLRDP*QTLRLL*SIADCEF*SLDGPL**GRSIVR  7521

Range 8: 7180 to 7209 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
27.2 bits(53) 0.0 10/10(100%) 0/10(0%) Plus/Plus
Query       10  GRDCV**NPH  39
                GRDCV**NPH
Subject   7180  GRDCV**NPH  7209

Grapevine rootstock stem lesion associated virus, complete genome

Sequence ID: NC_004724.1 Length: 16527 Number of Matches: 6

Range 1: 7157 to 7507 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
250.0 bits(542) 0.0 105/117(90%) 0/117(0%) Plus/Plus
Query        2  LVWGGTVSDEIRTDALSDDEAVEELSITEERDDSPKTVRVSEYLNRLNSSFEFPKPIVVDDNKETGGLTNAVREFYYMQELALFEIHSKLCAYYDQLRIVNFDRSMAPCNEDAQLYV  352
                LV  GTVSDE  T+ LSDDEA+EE+ ++EERDDSPKTVRVSEYLNRLNSSFEFPKPIVVDDNKETGGLTNAVREFYYMQELALFEIHSKLCAYYDQLRIVNF+RSMAPCNEDAQLYV
Subject   7157  LVRKGTVSDEEITNTLSDDEAIEEVPVSEERDDSPKTVRVSEYLNRLNSSFEFPKPIVVDDNKETGGLTNAVREFYYMQELALFEIHSKLCAYYDQLRIVNFERSMAPCNEDAQLYV  7507

Range 2: 7255 to 7506 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
164.2 bits(352) 0.0 76/84(90%) 0/84(0%) Minus/Minus
Query      100  TYN*ASSLQGAIERSKFTIRN*S**AQSLLWISKRANSCM**NSRTALVKPPVSLLSSTTIGLGNSKLEFSLFKYSLTLTVLGE  351
                TYN*ASSL GAIERSKFTIRN*S**A SLLWIS RA+SC+**NSRTALV PPVSLLSSTTIG GNSKLEF+LFKYSLTLTVLGE
Subject   7255  TYN*ASSLHGAIERSKFTIRN*S**AHSLLWISNRASSCI**NSRTALVNPPVSLLSSTTIGFGNSKLEFNLFKYSLTLTVLGE  7506

Range 3: 7157 to 7507 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
161.0 bits(345) 0.0 67/117(57%) 0/117(0%) Minus/Minus
Query        2  DVQLSVLITGGHRAIKIHNPQLIIVSAKFAMDLEESQFLHVIKFTHRVGQTSSLLIVIHHNRFRKFETRV*SIQVLAHPHRLR*IISLFGDRKLFDRFIVR*SVGADFIRHSPSPNQ  352
                +VQLS+LIT GHR  +IH+PQLI+VSA+FA+D + S+ LH+++F +RVG  SSLLIV+HH+R R+FE  V SIQ+  HP+R  *+++LFGD   F+RFI+R*SVG   I +SP  NQ
Subject   7157  NVQLSILITWGHRTFEIHDPQLIVVSAQFAVDFK*SELLHIVEFAYRVG*PSSLLIVVHHDRLREFEA*VQSIQIFTHPYRFG*VVALFGDWNFFNRFIIR*SVGDFLIGNSPLTNQ  7507

Range 4: 7158 to 7505 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.0 bits(308) 0.0 67/116(58%) 0/116(0%) Plus/Plus
Query        3  WFGEGLCLMKSAPTLYLTMKRSKSFRSPKSEMIHLRR*G*AST*ID*TRVSNFLNRLWWMTIRRLEV*PTRCVNFITCKNWLSSRSIANFALTMISCGL*ILIARWPPVMRTLNCT  350
                WF  GL  M+ +PTLYL MKR K F+SPKS   H +R*G* + *ID*T+ SN  +R WW TIRRLE *PTR  N   C++ L  +S AN ALT ISCG *I    WP VMR L+CT
Subject   7158  WFVRGLFPMRKSPTLYLMMKRLKKFQSPKSATTHPKR*G*VNI*ID*TQASNSRSRSWWTTIRRLEG*PTRYANSTICRSSLYLKSTANCALTTISCGS*ISNVLWPHVMRMLSCT  7505

Range 5: 7200 to 7505 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
117.9 bits(251) 0.0 53/102(52%) 0/102(0%) Minus/Minus
Query       45  RTIERPHYRGPSSDQNSQSATDHSKRKVCYGSRREPILACNKIHAPRWSNLQSPYCHPPQSV*EIRNSSLVYSSTRSPSPS*VNHLALR*SKALRPLHRQIK  350
                RT E PHY GP + +NS+SATD SKR VC G + E   A ++I  PRW  LQSPYC PP+S   IR+ S +YS+  SP P  V+  ALR  + L+ LH QIK
Subject   7200  RTTEHPHYMGP*NVRNSRSATDRSKRTVCCGFQIERAPAYSRIRVPRWLTLQSPYCRPPRSASGIRSLSSIYSNIHSPLPFWVSRRALRRLELLQSLHHQIK  7505

Range 6: 7267 to 7506 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
87.2 bits(184) 0.0 45/80(56%) 0/80(0%) Plus/Plus
Query      112  GEGERVLE*TKLEFRIS*TDCGG*Q*GDWRFDQRGA*ILLHARIGSLRDP*QTLRLL*SVADCEF*SLDGPL**GRSIVR  351
                G+GE + E* +L+ RI   D GG Q*GDWR +QRG  ILL+A   S+ +P QT+RLL SVAD EF +  GP+**G S+VR
Subject   7267  GKGE*IFE*IELKLRIPEADRGGRQ*GDWRVNQRGTRILLYAGARSI*NPQQTVRLLRSVADREFRTFYGPM**GCSVVR  7506

Grapevine leafroll associated virus 2 isolate GLV2 1050 02 polyprotein (ORF1a), RNA dependent RNA polymerase (ORF1b), 6.3 kDa small hydrophobic protein (ORF2), putative heat shock protein 70 (ORF3), 63 kDa putative cell to cell movemennt protein (ORF4), minor capsid protein (CPm), major capsid protein (CP), 19 kDa protein (ORF7), and 24 kDa protein (ORF8) genes, complete cds

Sequence ID: JX513891.1 Length: 16489 Number of Matches: 6

Range 1: 7145 to 7495 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
250.0 bits(542) 0.0 105/117(90%) 0/117(0%) Plus/Plus
Query        2  LVWGGTVSDEIRTDALSDDEAVEELSITEERDDSPKTVRVSEYLNRLNSSFEFPKPIVVDDNKETGGLTNAVREFYYMQELALFEIHSKLCAYYDQLRIVNFDRSMAPCNEDAQLYV  352
                LV  GTVSDE  T+ LSDDEA+EE+ ++EERDDSPKTVRVSEYLNRLNSSFEFPKPIVVDDNKETGGLTNAVREFYYMQELALFEIHSKLCAYYDQLRIVNF+RSMAPCNEDAQLYV
Subject   7145  LVRKGTVSDEEITNTLSDDEAIEEVPVSEERDDSPKTVRVSEYLNRLNSSFEFPKPIVVDDNKETGGLTNAVREFYYMQELALFEIHSKLCAYYDQLRIVNFERSMAPCNEDAQLYV  7495

Range 2: 7243 to 7494 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
164.2 bits(352) 0.0 76/84(90%) 0/84(0%) Minus/Minus
Query      100  TYN*ASSLQGAIERSKFTIRN*S**AQSLLWISKRANSCM**NSRTALVKPPVSLLSSTTIGLGNSKLEFSLFKYSLTLTVLGE  351
                TYN*ASSL GAIERSKFTIRN*S**A SLLWIS RA+SC+**NSRTALV PPVSLLSSTTIG GNSKLEF+LFKYSLTLTVLGE
Subject   7243  TYN*ASSLHGAIERSKFTIRN*S**AHSLLWISNRASSCI**NSRTALVNPPVSLLSSTTIGFGNSKLEFNLFKYSLTLTVLGE  7494

Range 3: 7145 to 7495 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
162.8 bits(349) 0.0 68/117(58%) 0/117(0%) Minus/Minus
Query        2  DVQLSVLITGGHRAIKIHNPQLIIVSAKFAMDLEESQFLHVIKFTHRVGQTSSLLIVIHHNRFRKFETRV*SIQVLAHPHRLR*IISLFGDRKLFDRFIVR*SVGADFIRHSPSPNQ  352
                +VQLS+LIT GHRA +IH+PQLI+VSA+FA+D + S+ LH+++F +RVG  SSLLIV+HH+R R+FE  V SIQ+  HP+R  *+++LFGD   F+RFI+R*SVG   I +SP  NQ
Subject   7145  NVQLSILITWGHRAFEIHDPQLIVVSAQFAVDFK*SELLHIVEFAYRVG*PSSLLIVVHHDRLREFEA*VQSIQIFTHPYRFG*VVALFGDWNFFNRFIIR*SVGDFLIGNSPLTNQ  7495

Range 4: 7146 to 7493 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
145.9 bits(312) 0.0 68/116(59%) 0/116(0%) Plus/Plus
Query        3  WFGEGLCLMKSAPTLYLTMKRSKSFRSPKSEMIHLRR*G*AST*ID*TRVSNFLNRLWWMTIRRLEV*PTRCVNFITCKNWLSSRSIANFALTMISCGL*ILIARWPPVMRTLNCT  350
                WF  GL  M+ +PTLYL MKR K F+SPKS   H +R*G* + *ID*T+ SN  +R WW TIRRLE *PTR  N   C++ L  +S AN ALT ISCG *I  A WP VMR L+CT
Subject   7146  WFVRGLFPMRKSPTLYLMMKRLKKFQSPKSATTHPKR*G*VNI*ID*TQASNSRSRSWWTTIRRLEG*PTRYANSTICRSSLYLKSTANCALTTISCGS*ISNALWPHVMRMLSCT  7493

Range 5: 7188 to 7493 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
119.3 bits(254) 0.0 54/102(53%) 0/102(0%) Minus/Minus
Query       45  RTIERPHYRGPSSDQNSQSATDHSKRKVCYGSRREPILACNKIHAPRWSNLQSPYCHPPQSV*EIRNSSLVYSSTRSPSPS*VNHLALR*SKALRPLHRQIK  350
                RT E PHY GP S +NS+SATD SKR VC G + E   A ++I  PRW  LQSPYC PP+S   IR+ S +YS+  SP P  V+  ALR  + L+ LH QIK
Subject   7188  RTTEHPHYMGP*SVRNSRSATDRSKRTVCCGFQIERAPAYSRIRVPRWLTLQSPYCRPPRSASGIRSLSSIYSNIHSPLPFWVSRRALRRLELLQSLHHQIK  7493

Range 6: 7255 to 7494 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
89.0 bits(188) 0.0 46/80(57%) 0/80(0%) Plus/Plus
Query      112  GEGERVLE*TKLEFRIS*TDCGG*Q*GDWRFDQRGA*ILLHARIGSLRDP*QTLRLL*SVADCEF*SLDGPL**GRSIVR  351
                G+GE + E* +L+ RI   D GG Q*GDWR +QRG  ILL+A   S+ +P QT+RLL SVAD EF +L GP+**G S+VR
Subject   7255  GKGE*IFE*IELKLRIPEADRGGRQ*GDWRVNQRGTRILLYAGARSI*NPQQTVRLLRSVADREFRTLYGPM**GCSVVR  7494

Grapevine rootstock stem lesion associated virus methyltransferase/helicase polyprotein, RNA dependent RNA polymerase, p6, HSP70 like protein, HSP90 like protein, coat protein duplicate, coat protein, p19, and p24 genes, complete cds

Sequence ID: AF314061.1 Length: 16527 Number of Matches: 6

Range 1: 7157 to 7507 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
250.0 bits(542) 0.0 105/117(90%) 0/117(0%) Plus/Plus
Query        2  LVWGGTVSDEIRTDALSDDEAVEELSITEERDDSPKTVRVSEYLNRLNSSFEFPKPIVVDDNKETGGLTNAVREFYYMQELALFEIHSKLCAYYDQLRIVNFDRSMAPCNEDAQLYV  352
                LV  GTVSDE  T+ LSDDEA+EE+ ++EERDDSPKTVRVSEYLNRLNSSFEFPKPIVVDDNKETGGLTNAVREFYYMQELALFEIHSKLCAYYDQLRIVNF+RSMAPCNEDAQLYV
Subject   7157  LVRKGTVSDEEITNTLSDDEAIEEVPVSEERDDSPKTVRVSEYLNRLNSSFEFPKPIVVDDNKETGGLTNAVREFYYMQELALFEIHSKLCAYYDQLRIVNFERSMAPCNEDAQLYV  7507

Range 2: 7255 to 7506 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
164.2 bits(352) 0.0 76/84(90%) 0/84(0%) Minus/Minus
Query      100  TYN*ASSLQGAIERSKFTIRN*S**AQSLLWISKRANSCM**NSRTALVKPPVSLLSSTTIGLGNSKLEFSLFKYSLTLTVLGE  351
                TYN*ASSL GAIERSKFTIRN*S**A SLLWIS RA+SC+**NSRTALV PPVSLLSSTTIG GNSKLEF+LFKYSLTLTVLGE
Subject   7255  TYN*ASSLHGAIERSKFTIRN*S**AHSLLWISNRASSCI**NSRTALVNPPVSLLSSTTIGFGNSKLEFNLFKYSLTLTVLGE  7506

Range 3: 7157 to 7507 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
161.0 bits(345) 0.0 67/117(57%) 0/117(0%) Minus/Minus
Query        2  DVQLSVLITGGHRAIKIHNPQLIIVSAKFAMDLEESQFLHVIKFTHRVGQTSSLLIVIHHNRFRKFETRV*SIQVLAHPHRLR*IISLFGDRKLFDRFIVR*SVGADFIRHSPSPNQ  352
                +VQLS+LIT GHR  +IH+PQLI+VSA+FA+D + S+ LH+++F +RVG  SSLLIV+HH+R R+FE  V SIQ+  HP+R  *+++LFGD   F+RFI+R*SVG   I +SP  NQ
Subject   7157  NVQLSILITWGHRTFEIHDPQLIVVSAQFAVDFK*SELLHIVEFAYRVG*PSSLLIVVHHDRLREFEA*VQSIQIFTHPYRFG*VVALFGDWNFFNRFIIR*SVGDFLIGNSPLTNQ  7507

Range 4: 7158 to 7505 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.0 bits(308) 0.0 67/116(58%) 0/116(0%) Plus/Plus
Query        3  WFGEGLCLMKSAPTLYLTMKRSKSFRSPKSEMIHLRR*G*AST*ID*TRVSNFLNRLWWMTIRRLEV*PTRCVNFITCKNWLSSRSIANFALTMISCGL*ILIARWPPVMRTLNCT  350
                WF  GL  M+ +PTLYL MKR K F+SPKS   H +R*G* + *ID*T+ SN  +R WW TIRRLE *PTR  N   C++ L  +S AN ALT ISCG *I    WP VMR L+CT
Subject   7158  WFVRGLFPMRKSPTLYLMMKRLKKFQSPKSATTHPKR*G*VNI*ID*TQASNSRSRSWWTTIRRLEG*PTRYANSTICRSSLYLKSTANCALTTISCGS*ISNVLWPHVMRMLSCT  7505

Range 5: 7200 to 7505 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
117.9 bits(251) 0.0 53/102(52%) 0/102(0%) Minus/Minus
Query       45  RTIERPHYRGPSSDQNSQSATDHSKRKVCYGSRREPILACNKIHAPRWSNLQSPYCHPPQSV*EIRNSSLVYSSTRSPSPS*VNHLALR*SKALRPLHRQIK  350
                RT E PHY GP + +NS+SATD SKR VC G + E   A ++I  PRW  LQSPYC PP+S   IR+ S +YS+  SP P  V+  ALR  + L+ LH QIK
Subject   7200  RTTEHPHYMGP*NVRNSRSATDRSKRTVCCGFQIERAPAYSRIRVPRWLTLQSPYCRPPRSASGIRSLSSIYSNIHSPLPFWVSRRALRRLELLQSLHHQIK  7505

Range 6: 7267 to 7506 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
87.2 bits(184) 0.0 45/80(56%) 0/80(0%) Plus/Plus
Query      112  GEGERVLE*TKLEFRIS*TDCGG*Q*GDWRFDQRGA*ILLHARIGSLRDP*QTLRLL*SVADCEF*SLDGPL**GRSIVR  351
                G+GE + E* +L+ RI   D GG Q*GDWR +QRG  ILL+A   S+ +P QT+RLL SVAD EF +  GP+**G S+VR
Subject   7267  GKGE*IFE*IELKLRIPEADRGGRQ*GDWRVNQRGTRILLYAGARSI*NPQQTVRLLRSVADREFRTFYGPM**GCSVVR  7506

Grapevine leafroll associated virus 2 isolate GLRaV 2 SG, complete genome

Sequence ID: KF220376.1 Length: 16474 Number of Matches: 6

Range 1: 7181 to 7519 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
238.1 bits(516) 0.0 98/113(87%) 0/113(0%) Plus/Plus
Query       14  GTVSDEIRTDALSDDEAVEELSITEERDDSPKTVRVSEYLNRLNSSFEFPKPIVVDDNKETGGLTNAVREFYYMQELALFEIHSKLCAYYDQLRIVNFDRSMAPCNEDAQLYV  352
                GT + +    ALSDDEAVEE+S+ +ERDDSPKTVR+SEYLNRLNSSFEFPKPIVVDDNK+TGGLTNAVREFYYMQELALFEIHSKLCAYYDQLRIVNFDRSMAPC+EDAQLYV
Subject   7181  GTTTSDDAVVALSDDEAVEEISVADERDDSPKTVRMSEYLNRLNSSFEFPKPIVVDDNKDTGGLTNAVREFYYMQELALFEIHSKLCAYYDQLRIVNFDRSMAPCSEDAQLYV  7519

Range 2: 7267 to 7518 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
146.8 bits(314) 0.0 70/84(83%) 0/84(0%) Minus/Minus
Query      100  TYN*ASSLQGAIERSKFTIRN*S**AQSLLWISKRANSCM**NSRTALVKPPVSLLSSTTIGLGNSKLEFSLFKYSLTLTVLGE  351
                TY+*ASSL GAI+RSKFT+R+ S**AQSLL ISKRA+SC+**NS TA VKPPVSLLSSTTIG GNSKLEF+LFKYSL LTVLGE
Subject   7267  TYS*ASSLHGAIDRSKFTMRSWS**AQSLL*ISKRASSCI**NSLTAFVKPPVSLLSSTTIGFGNSKLEFNLFKYSLILTVLGE  7518

Range 3: 7217 to 7516 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
119.3 bits(254) 0.0 51/100(51%) 0/100(0%) Minus/Minus
Query       50  VQLSVLITGGHRAIKIHNPQLIIVSAKFAMDLEESQFLHVIKFTHRVGQTSSLLIVIHHNRFRKFETRV*SIQVLAHPHRLR*IISLFGDRKLFDRFIVR  349
                VQLS+     HR+IKIH  QL++V  +  M+ E+S+FLH++KF H +     + IV+H +R R+ E  V*SIQVLAHP RLR I+SL  D   FD FIVR
Subject   7217  VQLSIFAARRHRSIKIHYAQLVVVGTELTMNFEKSKFLHIVKFPHGIR*APGVFIVVHDDRLRELEA*V*SIQVLAHPDRLRRIVSLISDGDFFDSFIVR  7516

Range 4: 7209 to 7517 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.0 bits(153) 0.0 41/103(40%) 0/103(0%) Minus/Minus
Query       42  RTIERPHYRGPSSDQNSQSATDHSKRKVCYGSRREPILACNKIHAPRWSNLQSPYCHPPQSV*EIRNSSLVYSSTRSPSPS*VNHLALR*SKALRPLHRQIKR  350
                RT E      P  DQNS  A   S+ +  Y  R+E + A +KI +    + +  YC P +     R+ SL+YSSTRS  PS* N LA +  + LR LHRQ +R
Subject   7209  RTAEHLRCTAP*IDQNSLCAAGRSRHRAYYEFRKEQVPAYSKIPSRHSLSPRCLYCRPRR*ASGTRSLSLIYSSTRSS*PS*ANRLAHQRRRFLRQLHRQTER  7517

Range 5: 7209 to 7358 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.2 bits(101) 0.0 28/50(56%) 0/50(0%) Plus/Plus
Query       42  TLYLTMKRSKSFRSPKSEMIHLRR*G*AST*ID*TRVSNFLNRLWWMTIR  191
                +L LTMK SK   S  SE I LRR G*AST*ID*T+ S+  +   W TI+
Subject   7209  SLCLTMKLSKKSPSLMSETIRLRRSG*AST*ID*TQASSSRSLSSWTTIK  7358

Range 6: 7389 to 7517 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.6 bits(78) 0.0 18/43(42%) 0/43(0%) Plus/Plus
Query      222  NFITCKNWLSSRSIANFALTMISCGL*ILIARWPPVMRTLNCT  350
                NF  C+N L S+ I +   T  SC  *ILI  W    + L+CT
Subject   7389  NFTICRNLLFSKFIVSSVPTTTSCA**ILIDLWRRAAKMLSCT  7517

Nucleotide Sequence (613 letters)

Query ID:ds2016-58_48
Query definition:No definition line
Query length:589
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 10 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
62
124
186
248
310
372
434
496
558
613

Descriptions

Alignments

Grapevine leafroll associated virus 2, complete genome

Sequence ID: DQ286725.2 Length: 16535 Number of Matches: 12

Range 1: 11394 to 11825 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
342.4 bits(741) 0.0 141/144(98%) 0/144(0%) Minus/Minus
Query        1  IEA*YPRTEWELRPERK*SGDSSCPLSRYCELRNRSVTTPVNPRGTMSTAHNRPRLLLEGRKLLVFDQLVGVSTGCPPDREDKKTPQSVLNRT*HCASHPCFSRTTLK*ILRFLEFYSRKGA*LP*EYFYSP*HPPFYHQPLRK  432
                IE *YPRTEWEL+PERK*SGDSSCPLSRYCELRNRSVTTPVNPRGTMSTAHNRPRLLLEGRKLLVFDQLVGVSTGCPPDREDKKTPQSVLNRT*HCASHPCFSRTTLK*ILRFLEFYSRKGA*LP*EYFYSP*HPPFYHQPL K
Subject  11394  IEV*YPRTEWELQPERK*SGDSSCPLSRYCELRNRSVTTPVNPRGTMSTAHNRPRLLLEGRKLLVFDQLVGVSTGCPPDREDKKTPQSVLNRT*HCASHPCFSRTTLK*ILRFLEFYSRKGA*LP*EYFYSP*HPPFYHQPLLK  11825

Range 2: 11852 to 11995 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
117.9 bits(251) 0.0 46/48(96%) 0/48(0%) Minus/Minus
Query      459  DRNIQIEGDRRVRDAHHANVAEFYVRPTDFSVFGTFYIFTFEHCNLTM  602
                DRNIQIEGDRRVRDA HANVAEFYVRPTDFSVFGTFYIFTFEHCNLT+
Subject  11852  DRNIQIEGDRRVRDARHANVAEFYVRPTDFSVFGTFYIFTFEHCNLTL  11995

Range 3: 11979 to 12005 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
22.6 bits(43) 0.0 8/9(89%) 0/9(0%) Minus/Minus
Query      586  PQ*RSKHPD  612
                P *RSKHPD
Subject  11979  PH*RSKHPD  12005

Range 4: 11395 to 11994 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
427.2 bits(926) 0.0 196/200(98%) 0/200(0%) Minus/Minus
Query        2  IETSR*KVIGAYEMLITPMSQNFMFDPQIFLFLGHFIYSPSNTAT*RCEFLLALAKYRGVVPENGMGAPAGAQMIW*QLMSAIEIL*AAQSISNNPCEPERHDEYSAQPTATAARGSETFSIRSTCRCFDRMSSRPGR*EDPPISTKSHLTLRIPPMFFAYDFKVDSKIFRVLFT*GSITAVRIXXXXXXXXXXXSAPSK  601
                IETSR*KVIGAYEML+TPMSQNFMFDPQIFLFLGHFIYSPSNTA *RCEFLLALAKYRGVVPENGMGAPAGAQMIW*QLMSAIEIL*AAQSISNNPCEPERHDEYSAQPTATAARGSETFSIRSTCRCFDRMSSRPGR*EDPPISTKSHLTLRIPPMFFAYDFKVDSKIFRVLFT*GSITAVRILLFTLTSS LSSAP K
Subject  11395  IETSR*KVIGAYEMLVTPMSQNFMFDPQIFLFLGHFIYSPSNTAI*RCEFLLALAKYRGVVPENGMGAPAGAQMIW*QLMSAIEIL*AAQSISNNPCEPERHDEYSAQPTATAARGSETFSIRSTCRCFDRMSSRPGR*EDPPISTKSHLTLRIPPMFFAYDFKVDSKIFRVLFT*GSITAVRILLFTLTSSFLSSAPFK  11994

Range 5: 11399 to 12001 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
425.8 bits(923) 0.0 194/201(97%) 0/201(0%) Plus/Plus
Query        6  EGADDKREDVRVNKSILTAVMLPYVNRTLKILESTLKSYAKNMGGMRNVKCDLVLIGGSSYLPGLEDILSKHRQVDRILKVSDPRAAVAVGCAXXXXXXXXXXXXXXIDCAAHSISIADMSCHQIICAPAGAPIPFSGTTPLYLARANKNSHRQVAVFEGEYIKCPKNRKICGSNIKFCDIGVMSISYAPITFYLDVSIAT  608
                +GADDK+EDVRVNKSILTAVMLPYVNRTLKILESTLKSYAKNMGGMRNVKCDLVLIGGSSYLPGLEDILSKHRQVDRILKVSDPRAAVAVGCALYSSCLSGSQGLLLIDCAAHSISIADMSCHQIICAPAGAPIPFSGTTPLYLARANKNS RQ+AVFEGEYIKCPKNRKICGSNIKFCDIGV SISYAPITFYLDVSI++
Subject  11399  KGADDKKEDVRVNKSILTAVMLPYVNRTLKILESTLKSYAKNMGGMRNVKCDLVLIGGSSYLPGLEDILSKHRQVDRILKVSDPRAAVAVGCALYSSCLSGSQGLLLIDCAAHSISIADMSCHQIICAPAGAPIPFSGTTPLYLARANKNSQRQIAVFEGEYIKCPKNRKICGSNIKFCDIGVTSISYAPITFYLDVSISS  12001

Range 6: 11395 to 11817 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
327.3 bits(708) 0.0 139/141(99%) 0/141(0%) Plus/Plus
Query        2  FRRG***KGGC*GE*KYSYGSYAPLRE*NSKNLRIYFKVVREKHGWDAQC*VRFSTDWGVFLSSRSGGHPVETPTS*SNTKSFRPSSSSRGRLCAVLIVPLGFTGVVTDRLRSSQYLDSGHELSPDHLRSGRSSHSVLGYY  424
                F+RG***KGGC*GE*KYSYGSYAPLRE*NSKNLRIYFKVVREKHGWDAQC*VRFSTDWGVFLSSRSGGHPVETPTS*SNTKSFRPSSSSRGRLCAVLIVPLGFTGVVTDRLRSSQYLDSGHELSPDHLRSG SSHSVLGYY
Subject  11395  FKRG***KGGC*GE*KYSYGSYAPLRE*NSKNLRIYFKVVREKHGWDAQC*VRFSTDWGVFLSSRSGGHPVETPTS*SNTKSFRPSSSSRGRLCAVLIVPLGFTGVVTDRLRSSQYLDSGHELSPDHLRSGWSSHSVLGYY  11817

Range 7: 11869 to 11994 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
108.3 bits(230) 0.0 42/42(100%) 0/42(0%) Plus/Plus
Query      476  VRR*IYKMSQKQKNLWVEHKILRHWRDEHLVRAYHLLSGCFD  601
                VRR*IYKMSQKQKNLWVEHKILRHWRDEHLVRAYHLLSGCFD
Subject  11869  VRR*IYKMSQKQKNLWVEHKILRHWRDEHLVRAYHLLSGCFD  11994

Range 8: 11399 to 11812 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
314.5 bits(680) 0.0 136/138(99%) 0/138(0%) Minus/Minus
Query        6  TRERNGSSGRSANDLVTAHVRYRDTVSCAIDQ*QPL*TREAR*VQRTTDRDCCSRVGNF*YSINLSVFRQDVLQTGKIRRPPNQY*IALNIAHPTHVFRVRL*SRF*DF*SSIHVREHNCRKNTFIHPNILPFIISPF  419
                TRERNGSS RSANDLVTAHVRYRDTVSCAIDQ*QPL*TREAR*VQRTTDRDCCSRVGNF*YSINLSVFRQDVLQTGKIRRPPNQY*IALNIAHPTHVFRVRL*SRF*DF*SSIHVREHNCRKNTFIHPNIL FIISPF
Subject  11399  TRERNGSSSRSANDLVTAHVRYRDTVSCAIDQ*QPL*TREAR*VQRTTDRDCCSRVGNF*YSINLSVFRQDVLQTGKIRRPPNQY*IALNIAHPTHVFRVRL*SRF*DF*SSIHVREHNCRKNTFIHPNILLFIISPF  11812

Range 9: 11862 to 11930 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.8 bits(133) 0.0 23/23(100%) 0/23(0%) Minus/Minus
Query      469  ILCSTHRFFCFWDILYIHLRTLQ  537
                ILCSTHRFFCFWDILYIHLRTLQ
Subject  11862  ILCSTHRFFCFWDILYIHLRTLQ  11930

Range 10: 11400 to 11735 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
248.5 bits(536) 0.0 111/112(99%) 0/112(0%) Plus/Plus
Query        7  KGLMIKGRMLG*IKVFLRQLCSLT*IEL*KS*NLL*SRTRKTWVGCAMLSAI*Y*LGGLLIFPVWRTSCRNTDKLIEY*KFPTLEQQSRSVVRCTHRASRVHRGCY*SIAQL  342
                KGLMIK RMLG*IKVFLRQLCSLT*IEL*KS*NLL*SRTRKTWVGCAMLSAI*Y*LGGLLIFPVWRTSCRNTDKLIEY*KFPTLEQQSRSVVRCTHRASRVHRGCY*SIAQL
Subject  11400  KGLMIKRRMLG*IKVFLRQLCSLT*IEL*KS*NLL*SRTRKTWVGCAMLSAI*Y*LGGLLIFPVWRTSCRNTDKLIEY*KFPTLEQQSRSVVRCTHRASRVHRGCY*SIAQL  11735

Range 11: 11856 to 12002 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
103.2 bits(219) 0.0 47/49(96%) 0/49(0%) Plus/Plus
Query      463  VKLQCSKVNI*NVPKTEKSVGRT*NSATLA**ASRTRLSPSIWMFRSLL  609
                VKLQCSKVNI*NVPKTEKSVGRT*NSATLA* ASRTRLSPSIWMFRSL+
Subject  11856  VKLQCSKVNI*NVPKTEKSVGRT*NSATLA*RASRTRLSPSIWMFRSLV  12002

Range 12: 11775 to 11807 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.4 bits(47) 0.0 10/11(91%) 0/11(0%) Plus/Plus
Query      382  FALRPELPFRS  414
                FALR ELPFRS
Subject  11775  FALRLELPFRS  11807

Grapevine leafroll associated virus 2 strain Alfie membrane associated protein P6 (P6) and Hsp70 like protein genes, complete cds

Sequence ID: AY456132.1 Length: 2466 Number of Matches: 12

Range 1: 1226 to 1828 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
427.2 bits(926) 0.0 195/201(97%) 0/201(0%) Plus/Plus
Query        6  EGADDKREDVRVNKSILTAVMLPYVNRTLKILESTLKSYAKNMGGMRNVKCDLVLIGGSSYLPGLEDILSKHRQVDRILKVSDPRAAVAVGCAXXXXXXXXXXXXXXIDCAAHSISIADMSCHQIICAPAGAPIPFSGTTPLYLARANKNSHRQVAVFEGEYIKCPKNRKICGSNIKFCDIGVMSISYAPITFYLDVSIAT  608
                +GADDKREDVRVNKSILTAVMLPYVNRTLKILESTLKSYAKNMGGMRNVKCDLVLIGGSSYLPGLEDILSKHRQVDRILKVSDPRAAVAVGCALYSSCLSGSQGLLLIDCAAHSISIADMSCHQIICAPAGAPIPFSGTTPLYLARANKNS RQ+AVFEGEYIKCPKNRKICGSNIKFCDIGV SISYAPITFYLDVSI++
Subject   1226  KGADDKREDVRVNKSILTAVMLPYVNRTLKILESTLKSYAKNMGGMRNVKCDLVLIGGSSYLPGLEDILSKHRQVDRILKVSDPRAAVAVGCALYSSCLSGSQGLLLIDCAAHSISIADMSCHQIICAPAGAPIPFSGTTPLYLARANKNSQRQIAVFEGEYIKCPKNRKICGSNIKFCDIGVTSISYAPITFYLDVSISS  1828

Range 2: 1222 to 1821 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
425.4 bits(922) 0.0 196/200(98%) 0/200(0%) Minus/Minus
Query        2  IETSR*KVIGAYEMLITPMSQNFMFDPQIFLFLGHFIYSPSNTAT*RCEFLLALAKYRGVVPENGMGAPAGAQMIW*QLMSAIEIL*AAQSISNNPCEPERHDEYSAQPTATAARGSETFSIRSTCRCFDRMSSRPGR*EDPPISTKSHLTLRIPPMFFAYDFKVDSKIFRVLFT*GSITAVRIXXXXXXXXXXXSAPSK  601
                IETSR*KVIGAYEML+TPMSQNFMFDPQIFLFLGHFIYSPSNTA *RCEFLLALAKYRGVVPENG+GAPAGAQMIW*QLMSAIEIL*AAQSISNNPCEPERHDEYSAQPTATAARGSETFSIRSTCRCFDRMSSRPGR*EDPPISTKSHLTLRIPPMFFAYDFKVDSKIFRVLFT*GSITAVRILLFTLTSSLLSSAP K
Subject   1222  IETSR*KVIGAYEMLVTPMSQNFMFDPQIFLFLGHFIYSPSNTAI*RCEFLLALAKYRGVVPENGIGAPAGAQMIW*QLMSAIEIL*AAQSISNNPCEPERHDEYSAQPTATAARGSETFSIRSTCRCFDRMSSRPGR*EDPPISTKSHLTLRIPPMFFAYDFKVDSKIFRVLFT*GSITAVRILLFTLTSSLLSSAPFK  1821

Range 3: 1806 to 1832 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
22.6 bits(43) 0.0 8/9(89%) 0/9(0%) Minus/Minus
Query      586  PQ*RSKHPD  612
                P *RSKHPD
Subject   1806  PH*RSKHPD  1832

Range 4: 1221 to 1652 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
330.5 bits(715) 0.0 139/144(97%) 0/144(0%) Minus/Minus
Query        1  IEA*YPRTEWELRPERK*SGDSSCPLSRYCELRNRSVTTPVNPRGTMSTAHNRPRLLLEGRKLLVFDQLVGVSTGCPPDREDKKTPQSVLNRT*HCASHPCFSRTTLK*ILRFLEFYSRKGA*LP*EYFYSP*HPPFYHQPLRK  432
                IE *YPRTE ELRPERK*SGDSSCPLSRYCELRNRSVT PVNPRGTMSTAHNRPRLLLEGRKLLVFDQLVGVSTGCPPDREDKKTPQSVLNRT*HCASHPCFSRTTLK*ILRFLEFYSRKGA*LP*EYF SP*HPPFYHQPL K
Subject   1221  IEV*YPRTE*ELRPERK*SGDSSCPLSRYCELRNRSVTIPVNPRGTMSTAHNRPRLLLEGRKLLVFDQLVGVSTGCPPDREDKKTPQSVLNRT*HCASHPCFSRTTLK*ILRFLEFYSRKGA*LP*EYFCSP*HPPFYHQPLLK  1652

Range 5: 1679 to 1822 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
115.2 bits(245) 0.0 45/48(94%) 0/48(0%) Minus/Minus
Query      459  DRNIQIEGDRRVRDAHHANVAEFYVRPTDFSVFGTFYIFTFEHCNLTM  602
                DRNIQIEGDRRVRDA HANVAEFYVRPTDFSVFGTFYIFT EHCNLT+
Subject   1679  DRNIQIEGDRRVRDARHANVAEFYVRPTDFSVFGTFYIFTLEHCNLTL  1822

Range 6: 1222 to 1644 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
325.5 bits(704) 0.0 137/141(97%) 0/141(0%) Plus/Plus
Query        2  FRRG***KGGC*GE*KYSYGSYAPLRE*NSKNLRIYFKVVREKHGWDAQC*VRFSTDWGVFLSSRSGGHPVETPTS*SNTKSFRPSSSSRGRLCAVLIVPLGFTGVVTDRLRSSQYLDSGHELSPDHLRSGRSSHSVLGYY  424
                F+RG***KGGC*GE KYSYGSYAPLRE*NSKNLRIYFKVVREKHGWDAQC*VRFSTDWGVFLSSRSGGHPVETPTS*SNTKSFRPSSSSRGRLCAVLIVPLGFTG+VTDRLRSSQYLDSGHELSPDHLRSGRSS+SVLGYY
Subject   1222  FKRG***KGGC*GEQKYSYGSYAPLRE*NSKNLRIYFKVVREKHGWDAQC*VRFSTDWGVFLSSRSGGHPVETPTS*SNTKSFRPSSSSRGRLCAVLIVPLGFTGIVTDRLRSSQYLDSGHELSPDHLRSGRSSYSVLGYY  1644

Range 7: 1696 to 1821 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
105.1 bits(223) 0.0 41/42(98%) 0/42(0%) Plus/Plus
Query      476  VRR*IYKMSQKQKNLWVEHKILRHWRDEHLVRAYHLLSGCFD  601
                VR *IYKMSQKQKNLWVEHKILRHWRDEHLVRAYHLLSGCFD
Subject   1696  VRG*IYKMSQKQKNLWVEHKILRHWRDEHLVRAYHLLSGCFD  1821

Range 8: 1226 to 1639 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
314.0 bits(679) 0.0 135/138(98%) 0/138(0%) Minus/Minus
Query        6  TRERNGSSGRSANDLVTAHVRYRDTVSCAIDQ*QPL*TREAR*VQRTTDRDCCSRVGNF*YSINLSVFRQDVLQTGKIRRPPNQY*IALNIAHPTHVFRVRL*SRF*DF*SSIHVREHNCRKNTFIHPNILPFIISPF  419
                TRERN SSGRSANDLVTAHVRYRDTVSCAIDQ*Q L*TREAR*VQRTTDRDCCSRVGNF*YSINLSVFRQDVLQTGKIRRPPNQY*IALNIAHPTHVFRVRL*SRF*DF*SSIHVREHNCRKNTF+HPNILPFIISPF
Subject   1226  TRERNRSSGRSANDLVTAHVRYRDTVSCAIDQ*QSL*TREAR*VQRTTDRDCCSRVGNF*YSINLSVFRQDVLQTGKIRRPPNQY*IALNIAHPTHVFRVRL*SRF*DF*SSIHVREHNCRKNTFVHPNILPFIISPF  1639

Range 9: 1689 to 1757 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
60.6 bits(126) 0.0 22/23(96%) 0/23(0%) Minus/Minus
Query      469  ILCSTHRFFCFWDILYIHLRTLQ  537
                ILCSTHRFFCFWDILYIH RTLQ
Subject   1689  ILCSTHRFFCFWDILYIHPRTLQ  1757

Range 10: 1227 to 1562 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
246.7 bits(532) 0.0 110/112(98%) 0/112(0%) Plus/Plus
Query        7  KGLMIKGRMLG*IKVFLRQLCSLT*IEL*KS*NLL*SRTRKTWVGCAMLSAI*Y*LGGLLIFPVWRTSCRNTDKLIEY*KFPTLEQQSRSVVRCTHRASRVHRGCY*SIAQL  342
                KGLMIKGRMLG* KVFLRQLCSLT*IEL*KS*NLL*SRTRKTWVGCAMLSAI*Y*LGGLLIFPVWRTSCRNTDKLIEY*KFPTLEQQSRSVVRCTHRASRVHR CY*SIAQL
Subject   1227  KGLMIKGRMLG*TKVFLRQLCSLT*IEL*KS*NLL*SRTRKTWVGCAMLSAI*Y*LGGLLIFPVWRTSCRNTDKLIEY*KFPTLEQQSRSVVRCTHRASRVHRDCY*SIAQL  1562

Range 11: 1683 to 1829 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.9 bits(216) 0.0 46/49(94%) 0/49(0%) Plus/Plus
Query      463  VKLQCSKVNI*NVPKTEKSVGRT*NSATLA**ASRTRLSPSIWMFRSLL  609
                VKLQCS+VNI*NVPKTEKSVGRT*NSATLA* ASRTRLSPSIWMFRSL+
Subject   1683  VKLQCSRVNI*NVPKTEKSVGRT*NSATLA*RASRTRLSPSIWMFRSLV  1829

Range 12: 1602 to 1634 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.4 bits(47) 0.0 10/11(91%) 0/11(0%) Plus/Plus
Query      382  FALRPELPFRS  414
                FALRPEL FRS
Subject   1602  FALRPELLFRS  1634

Grapevine leafroll associated virus 2 isolate PG11 heat shock protein 70, heat shock protein 90, minor coat protein, major coat protein, and P19 genes, complete cds

Sequence ID: EF012720.1 Length: 5148 Number of Matches: 12

Range 1: 835 to 1437 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
391.5 bits(848) 0.0 175/201(87%) 0/201(0%) Plus/Plus
Query        6  EGADDKREDVRVNKSILTAVMLPYVNRTLKILESTLKSYAKNMGGMRNVKCDLVLIGGSSYLPGLEDILSKHRQVDRILKVSDPRAAVAVGCAXXXXXXXXXXXXXXIDCAAHSISIADMSCHQIICAPAGAPIPFSGTTPLYLARANKNSHRQVAVFEGEYIKCPKNRKICGSNIKFCDIGVMSISYAPITFYLDVSIAT  608
                +G DDKREDVRVNK ILT VMLPYVNRTL ILE+TLKSYAKNMGG+RNVKCDLVLIGGSSYLPGLEDILSKHR++DR+LKV+DPRAAVAVGCALYSSCLSGSQGLLL+DCAAH+I+IA MSC QIICAPAGAPIPFSGTTPLYLARAN+NS RQVAVFEGEY+KCPKNRKICGSNIKF DIGV S+SY+PITFYLDV I++
Subject    835  KGLDDKREDVRVNKEILTTVMLPYVNRTLNILEATLKSYAKNMGGLRNVKCDLVLIGGSSYLPGLEDILSKHRRIDRVLKVADPRAAVAVGCALYSSCLSGSQGLLLVDCAAHTIAIAGMSCDQIICAPAGAPIPFSGTTPLYLARANRNSQRQVAVFEGEYVKCPKNRKICGSNIKFFDIGVTSVSYSPITFYLDVGISS  1437

Range 2: 879 to 1424 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
330.5 bits(715) 0.0 139/182(76%) 0/182(0%) Minus/Minus
Query       50  TSR*KVIGAYEMLITPMSQNFMFDPQIFLFLGHFIYSPSNTAT*RCEFLLALAKYRGVVPENGMGAPAGAQMIW*QLMSAIEIL*AAQSISNNPCEPERHDEYSAQPTATAARGSETFSIRSTCRCFDRMSSRPGR*EDPPISTKSHLTLRIPPMFFAYDFKVDSKIFRVLFT*GSITAVRI  595
                TS+*KV+G YE L+TP+S+NF+F+PQIFLFLGHF YSPSNTAT*RCEFLLALAKY+GVVPENGMGAPAGAQ+IW QL+ AI I+*AAQS S++PCEPERHDE SAQPTATAARGS TFS RS  RCFD++SS+PGR E+PPI TKSHLTLR PP+F AYD  V SK+F+VL T GS+T VRI
Subject    879  TSK*KVMGEYETLVTPISKNFIFEPQIFLFLGHFTYSPSNTAT*RCEFLLALAKYKGVVPENGMGAPAGAQIIWSQLIPAIAIV*AAQSTSSSPCEPERHDE*SAQPTATAARGSATFSTRSIRRCFDKISSKPGRYEEPPIKTKSHLTLRNPPIFLAYDLSVASKMFKVLLTYGSMTVVRI  1424

Range 3: 1015 to 1248 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
95.0 bits(201) 0.0 47/78(60%) 0/78(0%) Minus/Minus
Query      186  TRERNGSSGRSANDLVTAHVRYRDTVSCAIDQ*QPL*TREAR*VQRTTDRDCCSRVGNF*YSINLSVFRQDVLQTGKI  419
                TRER+GSS  S N+LVTAH  Y D++S AI Q* PL*TREAR V+  T+R+C S VG+F YSIN S+ R D+ QT K+
Subject   1015  TRERDGSSRWSTNNLVTAHTGYSDSMSRAIYQ**PL*TREARRVKCATNRNCRSWVGDFQYSINPSMLR*DIFQTRKV  1248

Range 4: 1288 to 1416 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
60.6 bits(126) 0.0 23/43(53%) 0/43(0%) Minus/Minus
Query      459  IEGDRRVRDAHHANVAEFYVRPTDFSVFGTFYIFTFEHCNLTM  587
                IE D  VRDA + ++ +FY+  TDF VFGTF++ TFE+ NLT+
Subject   1288  IESDG*VRDARNTDIKKFYI*TTDFPVFGTFHVLTFEYSNLTL  1416

Range 5: 835 to 990 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.1 bits(116) 0.0 25/52(48%) 0/52(0%) Minus/Minus
Query        6  IALNIAHPTHVFRVRL*SRF*DF*SSIHVREHNCRKNTFIHPNILPFIISPF  161
                +  NIA   H+  VR    F D  SSI+V EH+C +N  IH N+LPFII  F
Subject    835  VTFNIA*SAHILGVRFKCGFQDVQSSINVWEHDCGENFLIHSNVLPFIIESF  990

Range 6: 834 to 1250 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
114.7 bits(244) 0.0 64/139(46%) 0/139(0%) Plus/Plus
Query        5  RRG***KGGC*GE*KYSYGSYAPLRE*NSKNLRIYFKVVREKHGWDAQC*VRFSTDWGVFLSSRSGGHPVETPTS*SNTKSFRPSSSSRGRLCAVLIVPLGFTGVVTDRLRSSQYLDSGHELSPDHLRSGRSSHSVLGY  421
                +R  **KGG * E*  S+ S+AP+R *N ++L  +  +VR+++G   QC*+    +    + S  G + +E  T *S+T+S RP+S S G L  +L+VPLGFT   T RLR S Y  S +EL PD+L S  SSH VLGY
Subject    834  KRTR**KGGR*SE*GNSHHSHAPIR**NFEHLGSHT*IVRQEYGRITQC*M*LGFNRWFLIPSGFGRYLIEASTD*SSTESRRPTSGSCGWLRTLLVVPLGFTRATTGRLRGSYYRYSRYEL*PDYLCSSGSSHPVLGY  1250

Range 7: 1305 to 1424 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.1 bits(92) 0.0 19/40(48%) 0/40(0%) Plus/Plus
Query      476  VRR*IYKMSQKQKNLWVEHKILRHWRDEHLVRAYHLLSGC  595
                +RR*+ +MSQKQ+NLW ++KI  +   E LV  +H L  C
Subject   1305  IRR*VREMSQKQENLWFKYKIF*YRCYERLVLTHHFLFRC  1424

Range 8: 836 to 1249 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
115.6 bits(246) 0.0 66/138(48%) 0/138(0%) Minus/Minus
Query        7  YPRTEWELRPERK*SGDSSCPLSRYCELRNRSVTTPVNPRGTMSTAHNRPRLLLEGRKLLVFDQLVGVSTGCPPDREDKKTPQSVLNRT*HCASHPCFSRTTLK*ILRFLEFYSRKGA*LP*EYFYSP*HPPFYHQPL  420
                YPRT WEL  E K*SG SS  L R  E RN  V   VNPRGT S   N+P+L L GR+L V DQ V  S    P+ E  +  +   +  *HC   P   RT    + R  +FY R GA*L *E+ YS * PPFYH+ L
Subject    836  YPRTGWELPLEHK*SGHSSYRL*R*YEPRNLPVVALVNPRGTTSKVRNQPQLPLVGRRLSVLDQSVDASIRYLPNPEGMRNHRLKPSHI*HCVIRPYSWRTI*VWLPRCSKFY*RMGA*LW*EFPYSL*RPPFYHRVL  1249

Range 9: 1298 to 1366 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.4 bits(71) 0.0 14/23(61%) 0/23(0%) Minus/Minus
Query      469  ILCSTHRFFCFWDILYIHLRTLQ  537
                IL   HRF CFWDI   HLR  Q
Subject   1298  ILYLNHRFSCFWDISRTHLRIQQ  1366

Range 10: 1019 to 1171 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.9 bits(131) 0.0 30/51(59%) 0/51(0%) Plus/Plus
Query      190  FPVWRTSCRNTDKLIEY*KFPTLEQQSRSVVRCTHRASRVHRGCY*SIAQL  342
                F VW+ S R+ D LIEY*K PT E+Q R V   T RASRVH+G Y  IA+L
Subject   1019  FRVWKISYRSIDGLIEY*KSPTHERQLRLVAHFTRRASRVHKGYYW*IARL  1171

Range 11: 836 to 985 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.4 bits(84) 0.0 25/50(50%) 0/50(0%) Plus/Plus
Query        7  KGLMIKGRMLG*IKVFLRQLCSLT*IEL*KS*NLL*SRTRKTWVGCAMLS  156
                K  MIKGR L *I+ F  Q CS T IEL* S     +RT + W   AML+
Subject    836  KDSMIKGRTLE*IRKFSPQSCSHTLIEL*TSWKPHLNRTPRIWADYAMLN  985

Range 12: 1292 to 1423 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.7 bits(76) 0.0 25/44(57%) 0/44(0%) Plus/Plus
Query      463  VKLQCSKVNI*NVPKTEKSVGRT*NSATLA**ASRTRLSPSIWM  594
                VKL  SKV+ *NVPKT KSV + *N       ASRT  S SI M
Subject   1292  VKLLYSKVST*NVPKTGKSVVQI*NFLISVLRASRTHPSLSI*M  1423

Grapevine rootstock stem lesion associated virus, complete genome

Sequence ID: NC_004724.1 Length: 16527 Number of Matches: 10

Range 1: 11386 to 11988 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
386.4 bits(837) 0.0 171/201(85%) 0/201(0%) Plus/Plus
Query        6  EGADDKREDVRVNKSILTAVMLPYVNRTLKILESTLKSYAKNMGGMRNVKCDLVLIGGSSYLPGLEDILSKHRQVDRILKVSDPRAAVAVGCAXXXXXXXXXXXXXXIDCAAHSISIADMSCHQIICAPAGAPIPFSGTTPLYLARANKNSHRQVAVFEGEYIKCPKNRKICGSNIKFCDIGVMSISYAPITFYLDVSIAT  608
                +G+DDK+EDVRVNKSILT VMLPYVNRTL ILE+TLKSYAKNMGG+R+VKCDLVLIGGSSYLPGLEDILSKHR++DRILKV+DPRAAVAVGCALYSSCLSGSQGLLL+DCAAH+I+IA MSC QIICAPAGAPIPFSGTTPLYL +AN+NS RQ+AVFEGEY+KCP+NRKICGSNIKF DIGV S+SY+PITFYLDV+I++
Subject  11386  KGSDDKKEDVRVNKSILTTVMLPYVNRTLNILEATLKSYAKNMGGLRSVKCDLVLIGGSSYLPGLEDILSKHRRIDRILKVADPRAAVAVGCALYSSCLSGSQGLLLVDCAAHTIAIAGMSCDQIICAPAGAPIPFSGTTPLYLPKANRNSQRQIAVFEGEYVKCPRNRKICGSNIKFLDIGVTSVSYSPITFYLDVTISS  11988

Range 2: 11430 to 11975 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
330.1 bits(714) 0.0 138/182(76%) 0/182(0%) Minus/Minus
Query       50  TSR*KVIGAYEMLITPMSQNFMFDPQIFLFLGHFIYSPSNTAT*RCEFLLALAKYRGVVPENGMGAPAGAQMIW*QLMSAIEIL*AAQSISNNPCEPERHDEYSAQPTATAARGSETFSIRSTCRCFDRMSSRPGR*EDPPISTKSHLTLRIPPMFFAYDFKVDSKIFRVLFT*GSITAVRI  595
                TS+*KV+G YE L+TP+S+N MF+PQIFLFLGHF YSPSNTA *RCEFLLA  KY GVVPE G+GAPAGAQ+IW QL+ AI ++*AAQS +N+PCEPERHDEYSAQPTATAARGS TF+IRS  RCFD++SS+PGR E+PPISTKSHLTLR PP+F AYD  V SKIF+VL T*GSIT VRI
Subject  11430  TSK*KVMGEYETLVTPISRNLMFEPQIFLFLGHFTYSPSNTAI*RCEFLLAFGKYNGVVPEKGIGAPAGAQIIWSQLIPAIAMV*AAQSTNNSPCEPERHDEYSAQPTATAARGSATFNIRSIRRCFDKISSKPGRYEEPPISTKSHLTLRNPPIFLAYDLSVASKIFKVLLT*GSITVVRI  11975

Range 3: 11386 to 11796 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
155.5 bits(333) 0.0 80/137(58%) 0/137(0%) Minus/Minus
Query        6  RERNGSSGRSANDLVTAHVRYRDTVSCAIDQ*QPL*TREAR*VQRTTDRDCCSRVGNF*YSINLSVFRQDVLQTGKIRRPPNQY*IALNIAHPTHVFRVRL*SRF*DF*SSIHVREHNCRKNTFIHPNILPFIISPF  416
                RE N SS  SAN+LVTAH  Y D VS AID *QPL*T +AR + RTTDRD  S + +F YSI+ SVFR D+  T KIRR  + +*+A N   PTH+F VR    F + *SSI VREHN  +NTFIH NIL FI++PF
Subject  11386  REGNRSSSWSANNLVTAHTGYCDGVSRAID**QPL*T*KARRI*RTTDRDRRSGISDFQYSIDSSVFR*DIF*TRKIRRTTD*H*VAFNAP*PTHIFGVRFKCCFQNI*SSIDVREHNSSENTFIHSNILLFIVAPF  11796

Range 4: 11839 to 11967 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
44.1 bits(90) 0.0 18/43(42%) 0/43(0%) Minus/Minus
Query      459  IEGDRRVRDAHHANVAEFYVRPTDFSVFGTFYIFTFEHCNLTM  587
                IE D  V +A   ++ +F V   +FS+ GT ++FTFE+C+LT+
Subject  11839  IESDG*V*NACDTDIKKFNV*TANFSISGTLHVFTFEYCDLTL  11967

Range 5: 11387 to 11797 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
140.4 bits(300) 0.0 71/137(52%) 0/137(0%) Minus/Minus
Query        7  PRTEWELRPERK*SGDSSCPLSRYCELRNRSVTTPVNPRGTMSTAHNRPRLLLEGRKLLVFDQLVGVSTGCPPDREDKKTPQSVLNRT*HCASHPCFSRTTLK*ILRFLEFYSRKGA*LP*EYFYSP*HPPFYHQPL  417
                PR E EL+ ERK*SG SS  L R+CE RNR +T  VN +GT + AHNRPR  L  ++L +FD+ VGVS     + ED K  +  L+R *   +HP F RT    + ++L+FY RKGA*  *EYFYS *HPPFY + L
Subject  11387  PRRE*ELQLERK*SGHSSYRLLRWCEPRNRLITALVNLKGTTNIAHNRPRPPLGDQRLSIFDRFVGVSIRYLLNPEDTKNHRLALSRI*RSVTHPYFWRTI*VLLPKYLKFY*RKGA*Q**EYFYSL*HPPFYRRSL  11797

Range 6: 11849 to 11911 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.3 bits(62) 0.0 11/21(52%) 0/21(0%) Minus/Minus
Query      469  CSTHRFFCFWDILYIHLRTLQ  531
                C   +FF FWD   IHLR L+
Subject  11849  CLNRKFFYFWDTSRIHLRILR  11911

Range 7: 11400 to 11798 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
134.9 bits(288) 0.0 66/133(50%) 0/133(0%) Plus/Plus
Query       20  *KGGC*GE*KYSYGSYAPLRE*NSKNLRIYFKVVREKHGWDAQC*VRFSTDWGVFLSSRSGGHPVETPTS*SNTKSFRPSSSSRGRLCAVLIVPLGFTGVVTDRLRSSQYLDSGHELSPDHLRSGRSSHSVLG  418
                *KGGC* E*KYS+  YAPLR+*N K       +VR+K+GW  + *+R S +   F+SS    + +ETPT+ SN +S    S  RGRLCA+ +VP  FT  V  RLR S + +S +EL PD+LRS  SS+S+LG
Subject  11400  *KGGC*SE*KYSHYCYAPLRQ*NFKYFGSNT*IVRQKYGWVTER*MRLSANRWFFVSSGFRRYLIETPTNRSNIESR*SPSGGRGRLCAIFVVPFRFTRAVISRLRGSHHRNSRYEL*PDYLRSSWSSYSLLG  11798

Range 8: 11856 to 11966 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
27.2 bits(53) 0.0 14/37(38%) 0/37(0%) Plus/Plus
Query      476  VRR*IYKMSQKQKNLWVEHKILRHWRDEHLVRAYHLL  586
                +RR*I ++SQK KNL  +H I  +   +  +  +H L
Subject  11856  IRR*IREVSQK*KNLRFKH*IS*YRCHKRFILTHHFL  11966

Range 9: 11495 to 11722 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.8 bits(170) 0.0 43/76(57%) 0/76(0%) Plus/Plus
Query      115  SRTRKTWVGCAMLSAI*Y*LGGLLIFPVWRTSCRNTDKLIEY*KFPTLEQQSRSVVRCTHRASRVHRGCY*SIAQL  342
                +RT K WVG   L+A * *   L IF V + S RNTD+ IEY*K    E++SRSVVR   RA +VH+GCY*SIA+L
Subject  11495  NRTPKIWVGYGALNAT*C*SVVLRIFRV*KISYRNTDESIEY*KSLIPERRSRSVVRYIRRAFQVHKGCY*SIARL  11722

Range 10: 11387 to 11473 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.6 bits(78) 0.0 21/29(72%) 0/29(0%) Plus/Plus
Query        7  KGLMIKGRMLG*IKVFLRQLCSLT*IEL*  93
                KG  IK RML *IKVF   LCSLT IEL*
Subject  11387  KGATIKRRMLE*IKVFSLLLCSLTSIEL*  11473

Grapevine rootstock stem lesion associated virus methyltransferase/helicase polyprotein, RNA dependent RNA polymerase, p6, HSP70 like protein, HSP90 like protein, coat protein duplicate, coat protein, p19, and p24 genes, complete cds

Sequence ID: AF314061.1 Length: 16527 Number of Matches: 10

Range 1: 11386 to 11988 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
386.4 bits(837) 0.0 171/201(85%) 0/201(0%) Plus/Plus
Query        6  EGADDKREDVRVNKSILTAVMLPYVNRTLKILESTLKSYAKNMGGMRNVKCDLVLIGGSSYLPGLEDILSKHRQVDRILKVSDPRAAVAVGCAXXXXXXXXXXXXXXIDCAAHSISIADMSCHQIICAPAGAPIPFSGTTPLYLARANKNSHRQVAVFEGEYIKCPKNRKICGSNIKFCDIGVMSISYAPITFYLDVSIAT  608
                +G+DDK+EDVRVNKSILT VMLPYVNRTL ILE+TLKSYAKNMGG+R+VKCDLVLIGGSSYLPGLEDILSKHR++DRILKV+DPRAAVAVGCALYSSCLSGSQGLLL+DCAAH+I+IA MSC QIICAPAGAPIPFSGTTPLYL +AN+NS RQ+AVFEGEY+KCP+NRKICGSNIKF DIGV S+SY+PITFYLDV+I++
Subject  11386  KGSDDKKEDVRVNKSILTTVMLPYVNRTLNILEATLKSYAKNMGGLRSVKCDLVLIGGSSYLPGLEDILSKHRRIDRILKVADPRAAVAVGCALYSSCLSGSQGLLLVDCAAHTIAIAGMSCDQIICAPAGAPIPFSGTTPLYLPKANRNSQRQIAVFEGEYVKCPRNRKICGSNIKFLDIGVTSVSYSPITFYLDVTISS  11988

Range 2: 11430 to 11975 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
330.1 bits(714) 0.0 138/182(76%) 0/182(0%) Minus/Minus
Query       50  TSR*KVIGAYEMLITPMSQNFMFDPQIFLFLGHFIYSPSNTAT*RCEFLLALAKYRGVVPENGMGAPAGAQMIW*QLMSAIEIL*AAQSISNNPCEPERHDEYSAQPTATAARGSETFSIRSTCRCFDRMSSRPGR*EDPPISTKSHLTLRIPPMFFAYDFKVDSKIFRVLFT*GSITAVRI  595
                TS+*KV+G YE L+TP+S+N MF+PQIFLFLGHF YSPSNTA *RCEFLLA  KY GVVPE G+GAPAGAQ+IW QL+ AI ++*AAQS +N+PCEPERHDEYSAQPTATAARGS TF+IRS  RCFD++SS+PGR E+PPISTKSHLTLR PP+F AYD  V SKIF+VL T*GSIT VRI
Subject  11430  TSK*KVMGEYETLVTPISRNLMFEPQIFLFLGHFTYSPSNTAI*RCEFLLAFGKYNGVVPEKGIGAPAGAQIIWSQLIPAIAMV*AAQSTNNSPCEPERHDEYSAQPTATAARGSATFNIRSIRRCFDKISSKPGRYEEPPISTKSHLTLRNPPIFLAYDLSVASKIFKVLLT*GSITVVRI  11975

Range 3: 11386 to 11796 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
155.5 bits(333) 0.0 80/137(58%) 0/137(0%) Minus/Minus
Query        6  RERNGSSGRSANDLVTAHVRYRDTVSCAIDQ*QPL*TREAR*VQRTTDRDCCSRVGNF*YSINLSVFRQDVLQTGKIRRPPNQY*IALNIAHPTHVFRVRL*SRF*DF*SSIHVREHNCRKNTFIHPNILPFIISPF  416
                RE N SS  SAN+LVTAH  Y D VS AID *QPL*T +AR + RTTDRD  S + +F YSI+ SVFR D+  T KIRR  + +*+A N   PTH+F VR    F + *SSI VREHN  +NTFIH NIL FI++PF
Subject  11386  REGNRSSSWSANNLVTAHTGYCDGVSRAID**QPL*T*KARRI*RTTDRDRRSGISDFQYSIDSSVFR*DIF*TRKIRRTTD*H*VAFNAP*PTHIFGVRFKCCFQNI*SSIDVREHNSSENTFIHSNILLFIVAPF  11796

Range 4: 11839 to 11967 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
44.1 bits(90) 0.0 18/43(42%) 0/43(0%) Minus/Minus
Query      459  IEGDRRVRDAHHANVAEFYVRPTDFSVFGTFYIFTFEHCNLTM  587
                IE D  V +A   ++ +F V   +FS+ GT ++FTFE+C+LT+
Subject  11839  IESDG*V*NACDTDIKKFNV*TANFSISGTLHVFTFEYCDLTL  11967

Range 5: 11387 to 11797 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
140.4 bits(300) 0.0 71/137(52%) 0/137(0%) Minus/Minus
Query        7  PRTEWELRPERK*SGDSSCPLSRYCELRNRSVTTPVNPRGTMSTAHNRPRLLLEGRKLLVFDQLVGVSTGCPPDREDKKTPQSVLNRT*HCASHPCFSRTTLK*ILRFLEFYSRKGA*LP*EYFYSP*HPPFYHQPL  417
                PR E EL+ ERK*SG SS  L R+CE RNR +T  VN +GT + AHNRPR  L  ++L +FD+ VGVS     + ED K  +  L+R *   +HP F RT    + ++L+FY RKGA*  *EYFYS *HPPFY + L
Subject  11387  PRRE*ELQLERK*SGHSSYRLLRWCEPRNRLITALVNLKGTTNIAHNRPRPPLGDQRLSIFDRFVGVSIRYLLNPEDTKNHRLALSRI*RSVTHPYFWRTI*VLLPKYLKFY*RKGA*Q**EYFYSL*HPPFYRRSL  11797

Range 6: 11849 to 11911 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.3 bits(62) 0.0 11/21(52%) 0/21(0%) Minus/Minus
Query      469  CSTHRFFCFWDILYIHLRTLQ  531
                C   +FF FWD   IHLR L+
Subject  11849  CLNRKFFYFWDTSRIHLRILR  11911

Range 7: 11400 to 11798 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
134.9 bits(288) 0.0 66/133(50%) 0/133(0%) Plus/Plus
Query       20  *KGGC*GE*KYSYGSYAPLRE*NSKNLRIYFKVVREKHGWDAQC*VRFSTDWGVFLSSRSGGHPVETPTS*SNTKSFRPSSSSRGRLCAVLIVPLGFTGVVTDRLRSSQYLDSGHELSPDHLRSGRSSHSVLG  418
                *KGGC* E*KYS+  YAPLR+*N K       +VR+K+GW  + *+R S +   F+SS    + +ETPT+ SN +S    S  RGRLCA+ +VP  FT  V  RLR S + +S +EL PD+LRS  SS+S+LG
Subject  11400  *KGGC*SE*KYSHYCYAPLRQ*NFKYFGSNT*IVRQKYGWVTER*MRLSANRWFFVSSGFRRYLIETPTNRSNIESR*SPSGGRGRLCAIFVVPFRFTRAVISRLRGSHHRNSRYEL*PDYLRSSWSSYSLLG  11798

Range 8: 11856 to 11966 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
27.2 bits(53) 0.0 14/37(38%) 0/37(0%) Plus/Plus
Query      476  VRR*IYKMSQKQKNLWVEHKILRHWRDEHLVRAYHLL  586
                +RR*I ++SQK KNL  +H I  +   +  +  +H L
Subject  11856  IRR*IREVSQK*KNLRFKH*IS*YRCHKRFILTHHFL  11966

Range 9: 11495 to 11722 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.8 bits(170) 0.0 43/76(57%) 0/76(0%) Plus/Plus
Query      115  SRTRKTWVGCAMLSAI*Y*LGGLLIFPVWRTSCRNTDKLIEY*KFPTLEQQSRSVVRCTHRASRVHRGCY*SIAQL  342
                +RT K WVG   L+A * *   L IF V + S RNTD+ IEY*K    E++SRSVVR   RA +VH+GCY*SIA+L
Subject  11495  NRTPKIWVGYGALNAT*C*SVVLRIFRV*KISYRNTDESIEY*KSLIPERRSRSVVRYIRRAFQVHKGCY*SIARL  11722

Range 10: 11387 to 11473 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.6 bits(78) 0.0 21/29(72%) 0/29(0%) Plus/Plus
Query        7  KGLMIKGRMLG*IKVFLRQLCSLT*IEL*  93
                KG  IK RML *IKVF   LCSLT IEL*
Subject  11387  KGATIKRRMLE*IKVFSLLLCSLTSIEL*  11473

Nucleotide Sequence (423 letters)

Query ID:ds2016-58_48
Query definition:No definition line
Query length:589
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 10 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
43
86
129
172
215
258
301
344
387
423

Descriptions

Alignments

Grapevine leafroll associated virus 2, complete genome

Sequence ID: DQ286725.2 Length: 16535 Number of Matches: 7

Range 1: 4097 to 4516 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
314.5 bits(680) 0.0 136/140(97%) 0/140(0%) Plus/Plus
Query        2  ESITDFAECKVAVELEELGCLRANAENDKIRNLAGDSLAAKLASEIVVDIDAKPISKRADHSRSDTCETKDVPKPRLRGGPRNGVIREFIDFILSSASRLFSCIADQQRIKTYVHYLDVAVSFLDENYENVSFILRVLSK  421
                ESITDFAECKVAVELEELGCLRANAENDKIRNLAGDSLAAKLASEIVVDIDAKPISKRADHSRSDTCE KDVPKP LRGG RNGVI+EFIDFILSSASRLFSCIADQQRIKTYVHYLDVAVSFLDENYENVSFILRVLSK
Subject   4097  ESITDFAECKVAVELEELGCLRANAENDKIRNLAGDSLAAKLASEIVVDIDAKPISKRADHSRSDTCEKKDVPKPGLRGGSRNGVIKEFIDFILSSASRLFSCIADQQRIKTYVHYLDVAVSFLDENYENVSFILRVLSK  4516

Range 2: 4098 to 4517 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
305.3 bits(660) 0.0 135/140(96%) 0/140(0%) Plus/Plus
Query        3  SRSRILRNVKWPWSLKS*AV*GRMLKTIRFEISPVTRWQRS*LVK*WSI*TLNPSLSERITRGVIRARRKMFLSRACVEVRGMELLENLLILFYRPRRACLVA*RISSASRPTFTILTWPSLS*MKITKMFHLFCGSSLK  422
                SRSRILRNVKWPWSLKS*AV*GRMLKTIRFEISPVTRWQRS*LVK*WSI*TLNPSLSERITRGVIR RRKMFLSR CVEVRGMELL+NLLILFYRPRRACLVA*RISSASRPT TILTWPSLS*MKITKMFH FCGSSLK
Subject   4098  SRSRILRNVKWPWSLKS*AV*GRMLKTIRFEISPVTRWQRS*LVK*WSI*TLNPSLSERITRGVIRVRRKMFLSRVCVEVRGMELLKNLLILFYRPRRACLVA*RISSASRPTSTILTWPSLS*MKITKMFHSFCGSSLK  4517

Range 3: 4096 to 4518 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
292.9 bits(633) 0.0 134/141(95%) 0/141(0%) Plus/Plus
Query        1  GVDHGFCGM*SGRGA*RVRLFEGEC*KR*DSKSRR*LAGSEAS**NSGRYRR*THL*ASGSLEE*YVRDERCS*AALAWRSEEWSY*RIY*FYFIVRVALV*LHSGSAAHQDLRSLS*RGRLFPR*KLRKCFIYFAGPL*R  423
                GVDHGFCGM*SGRGA*RVRLFEGEC*KR*DSKSRR*LAGSEAS**NSGRYRR*THL*ASGSLEE*YV +ERCS*A  AWR EEWSY*RIY*FYFIVRVALV*LHSGSAAHQDLR LS*RGRLFPR*KLRKCFI+FAGPL*R
Subject   4096  GVDHGFCGM*SGRGA*RVRLFEGEC*KR*DSKSRR*LAGSEAS**NSGRYRR*THL*ASGSLEE*YV*EERCS*AGFAWRFEEWSY*RIY*FYFIVRVALV*LHSGSAAHQDLRPLS*RGRLFPR*KLRKCFIHFAGPL*R  4518

Range 4: 4096 to 4518 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
291.6 bits(630) 0.0 136/141(96%) 0/141(0%) Minus/Minus
Query        1  PLERTRKINETFS*FSSRKETATSR**T*VLMRC*SAMQLNKRDADDKIKSINSLITPFLGPPRKRGLGTSFVSHVSLLE*SARLEMGLASISTTISLASFAASESPARFRILSFSAFALKQPNSSSSTATLHSAKSVIDS  423
                PLERTRK+NETFS*FSSRKETATSR* T*VLMRC*SAMQLNKRDADDKIKSINSLITPFL PPRK GLGTSF SHVSLLE*SARLEMGLASISTTISLASFAASESPARFRILSFSAFALKQPNSSSSTATLHSAKSVIDS
Subject   4096  PLERTRKMNETFS*FSSRKETATSR*WT*VLMRC*SAMQLNKRDADDKIKSINSLITPFLEPPRKPGLGTSFFSHVSLLE*SARLEMGLASISTTISLASFAASESPARFRILSFSAFALKQPNSSSSTATLHSAKSVIDS  4518

Range 5: 4097 to 4516 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
276.9 bits(598) 0.0 134/140(96%) 0/140(0%) Minus/Minus
Query        2  FREDPQNK*NIFVIFI*ERDGHVKIVNVGLDALLIRYATKQARRGRXXXXXXXXXXXIPRTSTQARLRNIFRLARITPRVIRSLRDGFSVYIDHYFTS*LRCQRVTGEISNLIVFSIRPQTA*LFKLHGHFTFRKIRDRL  421
                FREDPQN+*NIFVIFI*ERDGHVKIV+VGLDALLIRYATKQARRGR*NKINKF NNSIPRTSTQ RLRNIF L RITPRVIRSLRDGFSVYIDHYFTS*LRCQRVTGEISNLIVFSIRPQTA*LFKLHGHFTFRKIRDRL
Subject   4097  FREDPQNE*NIFVIFI*ERDGHVKIVDVGLDALLIRYATKQARRGR*NKINKFFNNSIPRTSTQTRLRNIFLLTRITPRVIRSLRDGFSVYIDHYFTS*LRCQRVTGEISNLIVFSIRPQTA*LFKLHGHFTFRKIRDRL  4516

Range 6: 4098 to 4295 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
158.2 bits(339) 0.0 66/66(100%) 0/66(0%) Minus/Minus
Query        3  TYHSSSDPLA*RWV*RLYRPLFH*LASLPASHRRDFESYRFQHSPSNSLTLQAPRPLYIPQNP*ST  200
                TYHSSSDPLA*RWV*RLYRPLFH*LASLPASHRRDFESYRFQHSPSNSLTLQAPRPLYIPQNP*ST
Subject   4098  TYHSSSDPLA*RWV*RLYRPLFH*LASLPASHRRDFESYRFQHSPSNSLTLQAPRPLYIPQNP*ST  4295

Range 7: 4359 to 4517 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
117.9 bits(251) 0.0 52/53(98%) 0/53(0%) Minus/Minus
Query      264  L*RGPAK*MKHFRNFHLGKRRPRQDSERRS*CAADPLCN*TSATRTIK*NQ*I  422
                L*RGPAK*MKHFRNFHLGKRRPRQDS RRS*CAADPLCN*TSATRTIK*NQ*I
Subject   4359  L*RGPAK*MKHFRNFHLGKRRPRQDSGRRS*CAADPLCN*TSATRTIK*NQ*I  4517

Grapevine rootstock stem lesion associated virus, complete genome

Sequence ID: NC_004724.1 Length: 16527 Number of Matches: 8

Range 1: 4082 to 4501 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
266.4 bits(575) 0.0 109/140(78%) 0/140(0%) Plus/Plus
Query        2  ESITDFAECKVAVELEELGCLRANAENDKIRNLAGDSLAAKLASEIVVDIDAKPISKRADHSRSDTCETKDVPKPRLRGGPRNGVIREFIDFILSSASRLFSCIADQQRIKTYVHYLDVAVSFLDENYENVSFILRVLSK  421
                ESITDFAECKVAV+LEELGCLRANAEN+KIRNLAGDS+AAKLASEIVVDI+AKP++K A+H +S+  E K+  KP LRGG + GV++EF+DF+LSSASRLFSC+ADQQRIK+YVHYLD AVSFLD+NYEN+SFI+RVLSK
Subject   4082  ESITDFAECKVAVDLEELGCLRANAENEKIRNLAGDSMAAKLASEIVVDIEAKPVAKHAEHPKSEVSEKKEHAKPGLRGGSKAGVLKEFLDFVLSSASRLFSCVADQQRIKSYVHYLDTAVSFLDQNYENLSFIMRVLSK  4501

Range 2: 4081 to 4503 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.4 bits(418) 0.0 96/141(68%) 0/141(0%) Minus/Minus
Query        1  PLERTRKINETFS*FSSRKETATSR**T*VLMRC*SAMQLNKRDADDKIKSINSLITPFLGPPRKRGLGTSFVSHVSLLE*SARLEMGLASISTTISLASFAASESPARFRILSFSAFALKQPNSSSSTATLHSAKSVIDS  423
                P +RTR + E FS*F S+ +TA SR* T  L+RC*SA QLNKRDAD++ KS NS  TP   PPRK G   SF S  SL   SA L  G AS+STTISLA+FAA ESPARFRI SFSAFALK PNSS STATLHSAKSVIDS
Subject   4081  PFDRTRIMKERFS*F*SKNDTAVSR*WTYDLIRC*SATQLNKRDADERTKSRNSFKTPAFEPPRKPGFACSFFSLTSLFGCSACLATGFASMSTTISLANFAAIESPARFRIFSFSAFALKHPNSSRSTATLHSAKSVIDS  4503

Range 3: 4088 to 4324 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
74.8 bits(157) 0.0 33/79(42%) 0/79(0%) Minus/Minus
Query        8  RTSTQARLRNIFRLARITPRVIRSLRDGFSVYIDHYFTS*LRCQRVTGEISNLIVFSIRPQTA*LFKLHGHFTFRKIRD  244
                R STQA  R +      T RV     D F  Y+DHY  S  RC  V  E+ N  +  IR QT+ LFK+H +F F +I D
Subject   4088  RASTQAGFRVLLLFTHFTLRVFCVFSDRFRFYVDHYLASQFRCH*VASEVPNFFILGIRSQTSQLFKIHSYFAFGEICD  4324

Range 4: 4364 to 4501 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.1 bits(103) 0.0 24/46(52%) 0/46(0%) Minus/Minus
Query      284  FREDPQNK*NIFVIFI*ERDGHVKIVNVGLDALLIRYATKQARRGR  421
                FR +  N+  + VI I*ER   VK+++V L++LLIR+AT+QA RGR
Subject   4364  FR*NAHNEGEVLVILI*ERYSGVKVMDVRLNSLLIRHATEQA*RGR  4501

Range 5: 4083 to 4487 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.4 bits(191) 0.0 55/135(41%) 0/135(0%) Plus/Plus
Query        3  SRSRILRNVKWPWSLKS*AV*GRMLKTIRFEISPVTRWQRS*LVK*WSI*TLNPSLSERITRGVIRARRKMFLSRACVEVRGMELLENLLILFYRPRRACLVA*RISSASRPTFTILTWPSLS*MKITKMFHLFC  407
                ++S+I  N K  W LKS  V* RM +  +F  S  T+WQR+ L +*WS *  N SL+ + TR V   +R+   + ACVE R  E  ++  I F+RPR AC VA RI++    T   LT    S*++IT+     C
Subject   4083  NQSQISPNAK*LWILKSWDV*ERMPRMKKFGTSLATQWQRNWLAR*WST*KRNLSLNTQNTRRVK*VKRRSTRNPACVEARKPEF*KSSSISFFRPRHACSVAWRINNELSRTSITLTPLYRS*IRITRTSPSLC  4487

Range 6: 4081 to 4488 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
74.4 bits(156) 0.0 53/136(39%) 0/136(0%) Plus/Plus
Query        1  GVDHGFCGM*SGRGA*RVRLFEGEC*KR*DSKSRR*LAGSEAS**NSGRYRR*THL*ASGSLEE*YVRDERCS*AALAWRSEEWSY*RIY*FYFIVRVALV*LHSGSAAHQDLRSLS*RGRLFPR*KLRKCFIYFA  408
                G++H F  M S  G+*RV +FE EC +  +S+ R  L GSE  * +SGR+R  T  *   + EE*    E      LAWR E  S+ R+  F   VRV LV L  GS  +  +R L *   +  R +LR+  +++A
Subject   4081  GINHRFRRMQSSCGS*RVGMFESECRE*KNSEPRWRLNGSEIG*RDSGRHRSETCR*TRRTPEE*SE*KEGARETRLAWRLESRSFERVPRFRSFVRVTLVQLRGGSTTN*VVRPLP*HRCIVLRSELREPLLHYA  4488

Range 7: 4095 to 4274 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
44.6 bits(91) 0.0 28/60(47%) 0/60(0%) Minus/Minus
Query       15  HSSSDPLA*RWV*RLYRPLFH*LASLPASHRRDFESYRFQHSPSNSLTLQAPRPLYIPQN  194
                HSS     *R V  L RPL  *  SLP S +R  E +  +HS SN  TLQ P+ L I +N
Subject   4095  HSSGVLRV*RQVSLLCRPLSR*PISLPLSRQRGSEFFHSRHSLSNIPTLQDPQLLCIRRN  4274

Range 8: 4350 to 4466 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.9 bits(48) 0.0 16/39(41%) 0/39(0%) Minus/Minus
Query      270  RNFHLGKRRPRQDSERRS*CAADPLCN*TSATRTIK*NQ  386
                RN  L   +  Q + R +*   DP  N*TS TRT + N+
Subject   4350  RNSDLRTIQRCQGNGRTT*FVVDPPRN*TSVTRTKERNR  4466

Grapevine leafroll associated virus 2 isolate GLV2 1050 02 polyprotein (ORF1a), RNA dependent RNA polymerase (ORF1b), 6.3 kDa small hydrophobic protein (ORF2), putative heat shock protein 70 (ORF3), 63 kDa putative cell to cell movemennt protein (ORF4), minor capsid protein (CPm), major capsid protein (CP), 19 kDa protein (ORF7), and 24 kDa protein (ORF8) genes, complete cds

Sequence ID: JX513891.1 Length: 16489 Number of Matches: 8

Range 1: 4070 to 4489 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
266.4 bits(575) 0.0 110/140(79%) 0/140(0%) Plus/Plus
Query        2  ESITDFAECKVAVELEELGCLRANAENDKIRNLAGDSLAAKLASEIVVDIDAKPISKRADHSRSDTCETKDVPKPRLRGGPRNGVIREFIDFILSSASRLFSCIADQQRIKTYVHYLDVAVSFLDENYENVSFILRVLSK  421
                ESITDFAECKVAVELEELGCLRANAEN+KIRNLAGDS+AAKLASEIVVDIDAKP++K A+H +S+  E K+  KP LRGG + GV++EF+ F+LSSASRLFSC+ADQQRIK+YVHYLD AVSFLD+NYEN+SFI+RVLSK
Subject   4070  ESITDFAECKVAVELEELGCLRANAENEKIRNLAGDSMAAKLASEIVVDIDAKPVAKHAEHPKSEVSEKKEHAKPGLRGGSKAGVLKEFLGFVLSSASRLFSCVADQQRIKSYVHYLDTAVSFLDQNYENLSFIMRVLSK  4489

Range 2: 4069 to 4491 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.4 bits(418) 0.0 96/141(68%) 0/141(0%) Minus/Minus
Query        1  PLERTRKINETFS*FSSRKETATSR**T*VLMRC*SAMQLNKRDADDKIKSINSLITPFLGPPRKRGLGTSFVSHVSLLE*SARLEMGLASISTTISLASFAASESPARFRILSFSAFALKQPNSSSSTATLHSAKSVIDS  423
                P +RTR + E FS*F S+ +TA SR* T  L+RC*SA QLNKRDAD++ K  NS  TP   PPRK G   SF S  SL   SA L  G AS+STTISLA+FAA ESPARFRI SFSAFALK PNSSSSTATLHSAKSVIDS
Subject   4069  PFDRTRIMKERFS*F*SKNDTAVSR*WTYDLIRC*SATQLNKRDADERTKPRNSFKTPAFEPPRKPGFACSFFSLTSLFGCSACLATGFASMSTTISLANFAAIESPARFRIFSFSAFALKHPNSSSSTATLHSAKSVIDS  4491

Range 3: 4076 to 4312 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.7 bits(161) 0.0 33/79(42%) 0/79(0%) Minus/Minus
Query        8  RTSTQARLRNIFRLARITPRVIRSLRDGFSVYIDHYFTS*LRCQRVTGEISNLIVFSIRPQTA*LFKLHGHFTFRKIRD  244
                R STQA  R +      T RV     D F VY+DHY  S  RC  V  E+ N ++  IR QT+ LFK H +F F ++ D
Subject   4076  RASTQAGFRVLLLFTHFTLRVFCVFSDRFRVYVDHYLASQFRCH*VASEVPNFLILGIRSQTSQLFKFHSYFAFGEVCD  4312

Range 4: 4352 to 4489 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.0 bits(118) 0.0 26/46(57%) 0/46(0%) Minus/Minus
Query      284  FREDPQNK*NIFVIFI*ERDGHVKIVNVGLDALLIRYATKQARRGR  421
                FR +  N+  +FVI I*ER   VK+++V L++LLIR+AT+QARRGR
Subject   4352  FR*NAHNEGEVFVILI*ERYSGVKVMDVRLNSLLIRHATEQARRGR  4489

Range 5: 4071 to 4475 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
95.5 bits(202) 0.0 56/135(41%) 0/135(0%) Plus/Plus
Query        3  SRSRILRNVKWPWSLKS*AV*GRMLKTIRFEISPVTRWQRS*LVK*WSI*TLNPSLSERITRGVIRARRKMFLSRACVEVRGMELLENLLILFYRPRRACLVA*RISSASRPTFTILTWPSLS*MKITKMFHLFC  407
                ++S+   N K  W+LKS  V* RM +  +F  S  T+WQR+ L +*WS *T N SL+ + TR V   +R+   + ACVE R  E  ++  + F+RPRRAC VA RI++    T   LT    S*++ITK     C
Subject   4071  NQSQTSPNAK*LWNLKSWDV*ERMPRMRKFGTSLATQWQRNWLAR*WST*TRNLSLNTQNTRRVK*VKRRSTRNPACVEARKPEF*KSSSVSFFRPRRACSVAWRINNELSRTSITLTPLYRS*IRITKTSPSLC  4475

Range 6: 4069 to 4476 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
77.6 bits(163) 0.0 55/136(40%) 0/136(0%) Plus/Plus
Query        1  GVDHGFCGM*SGRGA*RVRLFEGEC*KR*DSKSRR*LAGSEAS**NSGRYRR*THL*ASGSLEE*YVRDERCS*AALAWRSEEWSY*RIY*FYFIVRVALV*LHSGSAAHQDLRSLS*RGRLFPR*KLRKCFIYFA  408
                G++H    M S  G *RV +FE EC +  +S+ R  L GSE  * +SGR+RR T  *   + EE*    E      LAWR E  S+ R+  F   VRVALV L  GS  +  +R L *   +  R +LRK  +++A
Subject   4069  GINHRLRRMQSSCGT*RVGMFESECRE*ENSEPRWRLNGSEIG*RDSGRHRRETCR*TRRTPEE*SE*KEGARETRLAWRLESRSFERVPRFRSFVRVALVQLRGGSTTN*VVRPLP*HRCIVLRSELRKPLLHYA  4476

Range 7: 4092 to 4262 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
44.1 bits(90) 0.0 28/57(49%) 0/57(0%) Minus/Minus
Query       24  HSSSDPLA*RWV*RLYRPLFH*LASLPASHRRDFESYRFQHSPSNSLTLQAPRPLYI  194
                HSS     *R V RL RPL  *  SLP S +R  E    +HS SN  TLQ P+ L I
Subject   4092  HSSGVLRV*RQVSRLCRPLSR*PISLPLSRQRGSEFSHSRHSLSNIPTLQVPQLLCI  4262

Range 8: 4338 to 4457 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.5 bits(58) 0.0 18/40(45%) 0/40(0%) Minus/Minus
Query      270  FRNFHLGKRRPRQDSERRS*CAADPLCN*TSATRTIK*NQ  389
                FRN  L   +  Q + R +*   DP  N*TSATRT + N+
Subject   4338  FRNSDLRTIQRCQGNGRTT*FVVDPPRN*TSATRTKERNR  4457

Grapevine rootstock stem lesion associated virus methyltransferase/helicase polyprotein, RNA dependent RNA polymerase, p6, HSP70 like protein, HSP90 like protein, coat protein duplicate, coat protein, p19, and p24 genes, complete cds

Sequence ID: AF314061.1 Length: 16527 Number of Matches: 8

Range 1: 4082 to 4501 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
266.4 bits(575) 0.0 109/140(78%) 0/140(0%) Plus/Plus
Query        2  ESITDFAECKVAVELEELGCLRANAENDKIRNLAGDSLAAKLASEIVVDIDAKPISKRADHSRSDTCETKDVPKPRLRGGPRNGVIREFIDFILSSASRLFSCIADQQRIKTYVHYLDVAVSFLDENYENVSFILRVLSK  421
                ESITDFAECKVAV+LEELGCLRANAEN+KIRNLAGDS+AAKLASEIVVDI+AKP++K A+H +S+  E K+  KP LRGG + GV++EF+DF+LSSASRLFSC+ADQQRIK+YVHYLD AVSFLD+NYEN+SFI+RVLSK
Subject   4082  ESITDFAECKVAVDLEELGCLRANAENEKIRNLAGDSMAAKLASEIVVDIEAKPVAKHAEHPKSEVSEKKEHAKPGLRGGSKAGVLKEFLDFVLSSASRLFSCVADQQRIKSYVHYLDTAVSFLDQNYENLSFIMRVLSK  4501

Range 2: 4081 to 4503 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.4 bits(418) 0.0 96/141(68%) 0/141(0%) Minus/Minus
Query        1  PLERTRKINETFS*FSSRKETATSR**T*VLMRC*SAMQLNKRDADDKIKSINSLITPFLGPPRKRGLGTSFVSHVSLLE*SARLEMGLASISTTISLASFAASESPARFRILSFSAFALKQPNSSSSTATLHSAKSVIDS  423
                P +RTR + E FS*F S+ +TA SR* T  L+RC*SA QLNKRDAD++ KS NS  TP   PPRK G   SF S  SL   SA L  G AS+STTISLA+FAA ESPARFRI SFSAFALK PNSS STATLHSAKSVIDS
Subject   4081  PFDRTRIMKERFS*F*SKNDTAVSR*WTYDLIRC*SATQLNKRDADERTKSRNSFKTPAFEPPRKPGFACSFFSLTSLFGCSACLATGFASMSTTISLANFAAIESPARFRIFSFSAFALKHPNSSRSTATLHSAKSVIDS  4503

Range 3: 4088 to 4324 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
74.8 bits(157) 0.0 33/79(42%) 0/79(0%) Minus/Minus
Query        8  RTSTQARLRNIFRLARITPRVIRSLRDGFSVYIDHYFTS*LRCQRVTGEISNLIVFSIRPQTA*LFKLHGHFTFRKIRD  244
                R STQA  R +      T RV     D F  Y+DHY  S  RC  V  E+ N  +  IR QT+ LFK+H +F F +I D
Subject   4088  RASTQAGFRVLLLFTHFTLRVFCVFSDRFRFYVDHYLASQFRCH*VASEVPNFFILGIRSQTSQLFKIHSYFAFGEICD  4324

Range 4: 4364 to 4501 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.1 bits(103) 0.0 24/46(52%) 0/46(0%) Minus/Minus
Query      284  FREDPQNK*NIFVIFI*ERDGHVKIVNVGLDALLIRYATKQARRGR  421
                FR +  N+  + VI I*ER   VK+++V L++LLIR+AT+QA RGR
Subject   4364  FR*NAHNEGEVLVILI*ERYSGVKVMDVRLNSLLIRHATEQA*RGR  4501

Range 5: 4083 to 4487 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.4 bits(191) 0.0 55/135(41%) 0/135(0%) Plus/Plus
Query        3  SRSRILRNVKWPWSLKS*AV*GRMLKTIRFEISPVTRWQRS*LVK*WSI*TLNPSLSERITRGVIRARRKMFLSRACVEVRGMELLENLLILFYRPRRACLVA*RISSASRPTFTILTWPSLS*MKITKMFHLFC  407
                ++S+I  N K  W LKS  V* RM +  +F  S  T+WQR+ L +*WS *  N SL+ + TR V   +R+   + ACVE R  E  ++  I F+RPR AC VA RI++    T   LT    S*++IT+     C
Subject   4083  NQSQISPNAK*LWILKSWDV*ERMPRMKKFGTSLATQWQRNWLAR*WST*KRNLSLNTQNTRRVK*VKRRSTRNPACVEARKPEF*KSSSISFFRPRHACSVAWRINNELSRTSITLTPLYRS*IRITRTSPSLC  4487

Range 6: 4081 to 4488 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
74.4 bits(156) 0.0 53/136(39%) 0/136(0%) Plus/Plus
Query        1  GVDHGFCGM*SGRGA*RVRLFEGEC*KR*DSKSRR*LAGSEAS**NSGRYRR*THL*ASGSLEE*YVRDERCS*AALAWRSEEWSY*RIY*FYFIVRVALV*LHSGSAAHQDLRSLS*RGRLFPR*KLRKCFIYFA  408
                G++H F  M S  G+*RV +FE EC +  +S+ R  L GSE  * +SGR+R  T  *   + EE*    E      LAWR E  S+ R+  F   VRV LV L  GS  +  +R L *   +  R +LR+  +++A
Subject   4081  GINHRFRRMQSSCGS*RVGMFESECRE*KNSEPRWRLNGSEIG*RDSGRHRSETCR*TRRTPEE*SE*KEGARETRLAWRLESRSFERVPRFRSFVRVTLVQLRGGSTTN*VVRPLP*HRCIVLRSELREPLLHYA  4488

Range 7: 4095 to 4274 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
44.6 bits(91) 0.0 28/60(47%) 0/60(0%) Minus/Minus
Query       15  HSSSDPLA*RWV*RLYRPLFH*LASLPASHRRDFESYRFQHSPSNSLTLQAPRPLYIPQN  194
                HSS     *R V  L RPL  *  SLP S +R  E +  +HS SN  TLQ P+ L I +N
Subject   4095  HSSGVLRV*RQVSLLCRPLSR*PISLPLSRQRGSEFFHSRHSLSNIPTLQDPQLLCIRRN  4274

Range 8: 4350 to 4466 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.9 bits(48) 0.0 16/39(41%) 0/39(0%) Minus/Minus
Query      270  RNFHLGKRRPRQDSERRS*CAADPLCN*TSATRTIK*NQ  386
                RN  L   +  Q + R +*   DP  N*TS TRT + N+
Subject   4350  RNSDLRTIQRCQGNGRTT*FVVDPPRN*TSVTRTKERNR  4466

Grapevine leafroll associated virus 2 isolate 3138 07, complete genome

Sequence ID: JX559644.1 Length: 16486 Number of Matches: 2

Range 1: 4099 to 4518 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
228.3 bits(492) 0.0 96/140(69%) 0/140(0%) Plus/Plus
Query        2  ESITDFAECKVAVELEELGCLRANAENDKIRNLAGDSLAAKLASEIVVDIDAKPISKRADHSRSDTCETKDVPKPRLRGGPRNGVIREFIDFILSSASRLFSCIADQQRIKTYVHYLDVAVSFLDENYENVSFILRVLSK  421
                ESITDFAECKVA+EL+ELGCLRA AEN+KIRNLAGDS+AAKLASEIVVDID+KP  K+  +S S+  + ++V +P LRGG RNGV+ EF+ F++ SA RLF    DQQRIK+YV +LD AVSFLD NY+N+SFILRVLS+
Subject   4099  ESITDFAECKVAIELDELGCLRAEAENEKIRNLAGDSIAAKLASEIVVDIDSKPSPKQVGNSSSENADKREVQRPGLRGGSRNGVVGEFLHFVVDSALRLFKYATDQQRIKSYVRFLDSAVSFLDYNYDNLSFILRVLSE  4518

Range 2: 4098 to 4520 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
160.5 bits(344) 0.0 88/141(62%) 0/141(0%) Minus/Minus
Query        1  PLERTRKINETFS*FSSRKETATSR**T*VLMRC*SAMQLNKRDADDKIKSINSLITPFLGPPRKRGLGTSFVSHVSLLE*SARLEMGLASISTTISLASFAASESPARFRILSFSAFALKQPNSSSSTATLHSAKSVIDS  423
                P E TR IN+  S*  S+ ETA S+  T* L+RC*S   L +R A+   K  NS  TPFL PPRK GL TS +S  S  E       GL SISTTISLAS AA ESPARF I SFSA ALKQPNSSSS ATLHSAKSVIDS
Subject   4098  PSESTRSINDRLS*L*SKNETAESKKRT*DLIRC*SVAYLKRRKAESTTK*RNSPTTPFLEPPRKPGL*TSRLSAFSDDELPTCFGEGLESISTTISLASLAAIESPARFLIFSFSASALKQPNSSSSIATLHSAKSVIDS  4520

Nucleotide Sequence (1459 letters)

Query ID:ds2016-58_48
Query definition:No definition line
Query length:589
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 10 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
146
292
438
584
730
876
1022
1168
1314
1459

Descriptions

Alignments

Grapevine leafroll associated virus 2, complete genome

Sequence ID: DQ286725.2 Length: 16535 Number of Matches: 8

Range 1: 14766 to 16148 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1068.2 bits(2325) 0.0 456/461(99%) 0/461(0%) Plus/Plus
Query        1  DDAICHRSENYIA*SSKGRF*CVILVRFWG*DYYCY*RGS*EGA*RICTSY*VH*QTSNYGSHFHRSVY*FLRGVQAQDASAQRSRRVGDTG*RFLPCSGFSGSMSETL*TAAKQKNVREYVRSED*RWGSKYTR*QSTPIG*EGSYVMEICTQNSESLVLLRTTQNTILLVIKSDGKVNLPKILICGYLRVSCHGDVTGCCREDIVKDFEGAHHTVIRSTTIQYDYESTAKEYNDSHCVVKFFLETGDVFWFFLRSDSRGRAARHLRTFFEANNFFFGSHCGTMEHCLKQVLIETESVIDSFCEERNR*DEGDSISL*S*RHSGEVNRYVAKHRQWCVGYEGMY*SIFDDNTRSALRKSLVSMVR*YWVISTRLR*KTPDRYHRVEFKNRSTSRAREGGESSL*R*T*RVSGVHYAKIC*TYGCAHSGGRKDRDAFSI*DSIK*TVVRNGLLYVTPANQT  1383
                DDAICHRSENYIA*SSKGRF*CVILVRFWG*+YYCY*RGS*EGA*RICTSY*VH*QTSNYGSHFHRSVY*FLRGVQAQDASAQRSRRVGDTG*RFLPCSGFSGSMSETL*TAAKQKNVREYVRSED*RWGSKYTR*QSTPIG*EGSYVMEICTQNSESLVLLRTTQNTILLVIKSDGKVNLPKILICGYLRVSCHGDVTGCCREDIVKDFEGAHHTVIRSTTIQYDYESTAKEYNDSHCVVKFFLETGDVFWFFLRSDSRGRAARHLRTFFEANNFFFGSHCGTMEHCLKQVLIETESVIDSFCEERNR*DEGDSISL*S*RHSGEVNRYVAKHRQWCVGYEGMY*SIFDDNTRSALRK+LVSMVR*YWVISTRLR*KTPDRYHRVEFKNRSTSRAREGGESSL*R*T*RVSGVHYAKIC*TYGCAHSGGRKDRDAFSI*DSIK*TVVRNGLLYVTP+ +T
Subject  14766  DDAICHRSENYIA*SSKGRF*CVILVRFWG*NYYCY*RGS*EGA*RICTSY*VH*QTSNYGSHFHRSVY*FLRGVQAQDASAQRSRRVGDTG*RFLPCSGFSGSMSETL*TAAKQKNVREYVRSED*RWGSKYTR*QSTPIG*EGSYVMEICTQNSESLVLLRTTQNTILLVIKSDGKVNLPKILICGYLRVSCHGDVTGCCREDIVKDFEGAHHTVIRSTTIQYDYESTAKEYNDSHCVVKFFLETGDVFWFFLRSDSRGRAARHLRTFFEANNFFFGSHCGTMEHCLKQVLIETESVIDSFCEERNR*DEGDSISL*S*RHSGEVNRYVAKHRQWCVGYEGMY*SIFDDNTRSALRKNLVSMVR*YWVISTRLR*KTPDRYHRVEFKNRSTSRAREGGESSL*R*T*RVSGVHYAKIC*TYGCAHSGGRKDRDAFSI*DSIK*TVVRNGLLYVTPSVET  16148

Range 2: 14767 to 16149 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1065.0 bits(2318) 0.0 456/461(99%) 0/461(0%) Minus/Minus
Query        2  VFG*RG*HIKGHF*RQFI*YCLR*RTHLYLYGLPNGHTRKFNIFSRNERH*LSRFIFTKMIRHLLAHERLSDS*IRLDGIDQAFFSAVALI*PSINAPLIRGFCAMHFSCYRRKYFNTFLHIQHTTVYVSQHIG*PRQNVFSFIRRYYHLHLNDFFLHKKNRLQTQFLSVPASNNAPWYRNAIQXXXXXXXXXCANDAPLFLYCRFGEKTRRRHPSLERILPHNGSHYTP*LWIRNRTVSLSNELQCDEHPRNLLLCLRDSIPSRLRGRIRANIRILVS*VN*PCHQI**LAVLCFELCGAVLAIRNSEYRFPSHNFPPTQLA*IANGCTYYPTFSLQSVHTREHFSALLQFREFRTCSQKIRCKVRIFSRYPQLCGCVELRHLVLVRHAEINIRFCESATHSSKFVSEPSKRCKSVKHLLKIPFSNSNSPIPRTVRE*HIRIAPLNFRRCSSRCDGI*HH  1384
                VF   G*HIKGHF*RQFI*YCLR*RTHLYLYGLPNGHTRKFNIFSRNERH*LSRFIFTKMIRHLLAHERLSDS*IRLDGIDQAFFSAVALI*PSINAPLIRGFCAMHFSCYRRKYFNTFLHIQHTTVYVSQHIG*PRQNVFSFIRRYYHLHLNDFFLHKKNRLQTQFLSVPASNNAPWYRNAIQRRNC*LRRRCANDAPLFLYCRFGEKT+RRHPSLERILPHNGSHYTP*LWIRNRTVSLSNELQCDEHPRNLLLCLRDSIPSRLRGRIRANIRILVS*VN*PCHQI**LAVLCFELCGAVLAIRNSEYRFPSHNFPPTQLA*IANGCTYYPTFSLQSVHTREHFSALLQFREFRTCSQKIRCKVRIFSRYPQLCGCVELRHLVLVRHAEINIRFCESATHSSKFVSEPSKRCKSVKHLLKIPFSNSNS IPRTVRE*HIRIAPLNFRRCSSRCDGI*HH
Subject  14767  VFPRSG*HIKGHF*RQFI*YCLR*RTHLYLYGLPNGHTRKFNIFSRNERH*LSRFIFTKMIRHLLAHERLSDS*IRLDGIDQAFFSAVALI*PSINAPLIRGFCAMHFSCYRRKYFNTFLHIQHTTVYVSQHIG*PRQNVFSFIRRYYHLHLNDFFLHKKNRLQTQFLSVPASNNAPWYRNAIQRRNC*LRRRCANDAPLFLYCRFGEKTKRRHPSLERILPHNGSHYTP*LWIRNRTVSLSNELQCDEHPRNLLLCLRDSIPSRLRGRIRANIRILVS*VN*PCHQI**LAVLCFELCGAVLAIRNSEYRFPSHNFPPTQLA*IANGCTYYPTFSLQSVHTREHFSALLQFREFRTCSQKIRCKVRIFSRYPQLCGCVELRHLVLVRHAEINIRFCESATHSSKFVSEPSKRCKSVKHLLKIPFSNSNSSIPRTVRE*HIRIAPLNFRRCSSRCDGI*HH  16149

Range 3: 14767 to 16155 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1005.5 bits(2188) 0.0 456/463(98%) 0/463(0%) Plus/Plus
Query        2  MMLYAIAARTTSPKVQRGDSDVLFSYGSGDRTITVTEGDLKKVLDGFAPLTRFTNKLRTMGRTFTEAYIDFCVAYKHKMPQLNAAAELGIPAEDSYLAADFLGACPKLSELQQSRKMFASMYALKTEGGVVSTPVSNLRQLGRREVM*WKSVLRIPNR*YCSAQLKTQYC*SSNLMARLIYLRY*YADICAYPATET*RDAVAKT**KISRVLITL*FVRQRYSTITNPQLRSIMTPIVW*NSF*RRVTSSGFFSEATVEEERRVICAPSSKLTISSLDRIAVPWSIV*SRY**KLSL*SILFXXXXXXXXXXXXSPYEAEDILARSTDMLRNIDSGVLDMKECIKVFSTITREVHCAKASYQWCVDTGLYQRDCAEKRLIDTIESNLRIAQPLVREKVANHLCKDEPRELVAFITRKYVKLTGVPIREAVKIEMRSLSKTVLNKLSLEMAFYMSPPLTKHTQ  1390
                MMLYAIAARTTSPKVQRGDSDVLFSYGSGDRTITVTEGDLKKVLDGFAPLTRFTNKLRTMGRTFTEAYIDFCVAYKHKMPQLNAAAELGIPAEDSYLAADFLGACPKLSELQQSRKMFASMYALKTEGGVVSTPVSNLRQLGRREVM*WKSVLRIPNR*YCSAQLKTQYC*SSNLMARLIYLRY*YADICAYPATET*RDAVAKT**KISRVLITL*FVRQRYSTITNPQLRSIMTPIVW*NSF*RRVTS GFFSEATVEEERRVICAPSSKLTISSLDRIAVPWSIV*SRY**KLSL*SILFVKKEIVKMKVIVSPYEAEDILARSTDMLRNIDSGVLDMKECIKVFSTITREVHCAK SYQWCVDTGLYQRDCAEKRLIDTIESNLRIAQPLVREKVANHLCKDEPRELVAFITRKYVKLTGVPIREAVKIEMRSLSKTVLNKLSLEMAFYMSP   KH +
Subject  14767  MMLYAIAARTTSPKVQRGDSDVLFSYGSGDRTITVTEGDLKKVLDGFAPLTRFTNKLRTMGRTFTEAYIDFCVAYKHKMPQLNAAAELGIPAEDSYLAADFLGACPKLSELQQSRKMFASMYALKTEGGVVSTPVSNLRQLGRREVM*WKSVLRIPNR*YCSAQLKTQYC*SSNLMARLIYLRY*YADICAYPATET*RDAVAKT**KISRVLITL*FVRQRYSTITNPQLRSIMTPIVW*NSF*RRVTSFGFFSEATVEEERRVICAPSSKLTISSLDRIAVPWSIV*SRY**KLSL*SILFVKKEIVKMKVIVSPYEAEDILARSTDMLRNIDSGVLDMKECIKVFSTITREVHCAKTSYQWCVDTGLYQRDCAEKRLIDTIESNLRIAQPLVREKVANHLCKDEPRELVAFITRKYVKLTGVPIREAVKIEMRSLSKTVLNKLSLEMAFYMSPRAWKHAE  16155

Range 4: 14930 to 16156 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
947.7 bits(2062) 0.0 405/409(99%) 0/409(0%) Plus/Plus
Query      165  TNFELWVALSQKRILISAWRTSTRCLSSTQPQSWGYRLKILTLQRIFWEHVRNSLNCSKAEKCSRVCTL*RLKVG**VHPLAIYANWVGGKLCDGNLYSEFRIASTAPHNSKHNTASHQI*WQG*FT*DTNMRIFARILPRRRDGMLSRRHSKRFRGCSSHCNSFDNDTVRLRIHS*GV**LPLCGKILSRDG*RLLVFSPKRQ*RKSGASFAHLLRS*QFLLWIALRYHGALFEAGTDRN*VCNRFFL*RKKSLR*R**YLLMKLKTFWRGQPICCET*TVVCWI*RNVLKYFRR*HEKCIAQKPRINGALILGYINATALKNA*SIPSSRI*ESLNLSCARRWRIIFVKMNLES*WRSLRENMLNLRVCPFGRP*R*RCVLYLRQY*INCR*KWPFICHPR*PNTPN  1391
                TNFELWVALSQKRILISAWRTSTRCLSSTQPQSWGYRLKILTLQRIFWEHVRNSLNCSKAEKCSRVCTL*RLKVG**VHPLAIYANWVGGKLCDGNLYSEFRIASTAPHNSKHNTASHQI*WQG*FT*DTNMRIFARILPRRRDGMLSRRHSKRFRGCSSHCNSFDNDTVRLRIHS*GV**LPLCGKILSRDG*RLLVFSPKRQ*RKSGASFAHLLRS*QFLLWIALRYHGALFEAGTDRN*VCNRFFL*RKKSLR*R**YLLMKLKTFWRGQPICCET*TVVCWI*RNVLKYFRR*HEKCIAQKPRINGALILGYINATALKNA*SIPSSRI*ESLNLSCARRWRIIFVKMNLES*WRSLRENMLNLRVCPFGRP*R*RCVLYLRQY*INCR*KWPFICHP   NT N
Subject  14930  TNFELWVALSQKRILISAWRTSTRCLSSTQPQSWGYRLKILTLQRIFWEHVRNSLNCSKAEKCSRVCTL*RLKVG**VHPLAIYANWVGGKLCDGNLYSEFRIASTAPHNSKHNTASHQI*WQG*FT*DTNMRIFARILPRRRDGMLSRRHSKRFRGCSSHCNSFDNDTVRLRIHS*GV**LPLCGKILSRDG*RLLVFSPKRQ*RKSGASFAHLLRS*QFLLWIALRYHGALFEAGTDRN*VCNRFFL*RKKSLR*R**YLLMKLKTFWRGQPICCET*TVVCWI*RNVLKYFRR*HEKCIAQKPRINGALILGYINATALKNA*SIPSSRI*ESLNLSCARRWRIIFVKMNLES*WRSLRENMLNLRVCPFGRP*R*RCVLYLRQY*INCR*KWPFICHPERGNTLN  16156

Range 5: 14768 to 14848 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.0 bits(142) 0.0 27/27(100%) 0/27(0%) Plus/Plus
Query        3  *CYMPSQRELHRLKFKGAILMCYSRTV  83
                *CYMPSQRELHRLKFKGAILMCYSRTV
Subject  14768  *CYMPSQRELHRLKFKGAILMCYSRTV  14848

Range 6: 14766 to 16148 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
992.6 bits(2160) 0.0 455/461(99%) 0/461(0%) Minus/Minus
Query        1  CLVSGGDI*KAISNDSLFNTVLDRERISIFTASRMGTPVSLTYFRVMNATNSLGSSLQR*FATFSRTRG*AILKFDSMVSIRRFSAQSR*YNPVSTHH*YEAFAQCTSRVIVENTLIHSFISNTPLSMFRNISVDLARMSSAS*GDXXXXXXXXXXXTKRIDYRLSFYQYLLQTMLHGTAMRSKEEIVSFEEGAQMTRRSSSTVASEKKPEDVTRL*KEFYHTMGVIILLSCGFVIVLYRCRTNYSVMSTLEIFYYVFATASRHVSVAGYAQISAY*YLR*INLAIRFDD*QYCVLSCAEQY*RFGILSTDFHHITSLLPNWRRLLTGVLTTPPSVFRAYILANIFLLCCSSESFGHAPRKSAAR*ESSAGIPNSAAALS*GILCLYATQKSIYASVKVRPIVRSLLVNLVRGANPSSTFLRSPSVTVIVLSPEPYENNTSESPL*TLGDVVLAAMAYSII  1383
                C  + GDI*KAISNDSLFNTVLDRERISIFTASRMGTPVSLTYFRVMNATNSLGSSLQR*FATFSRTRG*AILKFDSMVSIRRFSAQSR*YNPVSTHH*YE FAQCTSRVIVENTLIHSFISNTPLSMFRNISVDLARMSSAS*GDTITFILTISFFTKRIDYRLSFYQYLLQTMLHGTAMRSKEEIVSFEEGAQMTRRSSSTVASEKKP+DVTRL*KEFYHTMGVIILLSCGFVIVLYRCRTNYSVMSTLEIFYYVFATASRHVSVAGYAQISAY*YLR*INLAIRFDD*QYCVLSCAEQY*RFGILSTDFHHITSLLPNWRRLLTGVLTTPPSVFRAYILANIFLLCCSSESFGHAPRKSAAR*ESSAGIPNSAAALS*GILCLYATQKSIYASVKVRPIVRSLLVNLVRGANPSSTFLRSPSVTVIVLSPEPYENNTSESPL*TLGDVVLAAMAYSII
Subject  14766  CFHARGDI*KAISNDSLFNTVLDRERISIFTASRMGTPVSLTYFRVMNATNSLGSSLQR*FATFSRTRG*AILKFDSMVSIRRFSAQSR*YNPVSTHH*YEVFAQCTSRVIVENTLIHSFISNTPLSMFRNISVDLARMSSAS*GDTITFILTISFFTKRIDYRLSFYQYLLQTMLHGTAMRSKEEIVSFEEGAQMTRRSSSTVASEKKPKDVTRL*KEFYHTMGVIILLSCGFVIVLYRCRTNYSVMSTLEIFYYVFATASRHVSVAGYAQISAY*YLR*INLAIRFDD*QYCVLSCAEQY*RFGILSTDFHHITSLLPNWRRLLTGVLTTPPSVFRAYILANIFLLCCSSESFGHAPRKSAAR*ESSAGIPNSAAALS*GILCLYATQKSIYASVKVRPIVRSLLVNLVRGANPSSTFLRSPSVTVIVLSPEPYENNTSESPL*TLGDVVLAAMAYSII  16148

Range 7: 14768 to 15523 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
565.6 bits(1228) 0.0 251/252(100%) 0/252(0%) Minus/Minus
Query        3  NQKTSPVSRKNFTTQWESLYSLAVDS*SYCIVVERITV**APSKSFTMSSRQHPVTSPWQDTRKYPHISILGKLTLPSDLMTSSIVF*VVRSSTSDSEF*VQISIT*LPSYPIGVDC*RVYLLPHLQSSERTYSRTFFCFAAVQRVSDMLPENPLQGKNLQPVSPTLRLR*AEASCACTPRRNQYTLL*KCDP*FEVC**T**EVQIRQAPS*DPLQ*Q**SYPQNRTRITHQNRPFEL*AM*FSLRWHIAS  758
                NQKTSPVSRKNFTTQWESLYSLAVDS*SYCIVVERITV**APSKSFTMSSRQHPVTSPWQDTRKYPHISILGKLTLPSDLMTSSIVF*VVRSSTSDSEF*VQISIT*LPSYPIGVDC*RVYLLPHLQSSERTYSRTFFCFAAVQRVSDMLPENPLQGKNLQPVSPTLRLR*AEASCACTPRRNQYTLL*KCDP*FEVC**T**EVQIRQAPS*DPLQ*Q** YPQNRTRITHQNRPFEL*AM*FSLRWHIAS
Subject  14768  NQKTSPVSRKNFTTQWESLYSLAVDS*SYCIVVERITV**APSKSFTMSSRQHPVTSPWQDTRKYPHISILGKLTLPSDLMTSSIVF*VVRSSTSDSEF*VQISIT*LPSYPIGVDC*RVYLLPHLQSSERTYSRTFFCFAAVQRVSDMLPENPLQGKNLQPVSPTLRLR*AEASCACTPRRNQYTLL*KCDP*FEVC**T**EVQIRQAPS*DPLQ*Q**FYPQNRTRITHQNRPFEL*AM*FSLRWHIAS  15523

Range 8: 15599 to 16135 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
417.1 bits(904) 0.0 178/179(99%) 0/179(0%) Minus/Minus
Query      834  GVTYKRPFLTTVYLILS*IENASLSLRPPEWAHP*V*HIFA**TPLTL*VHLYKDDSPPSRAREVERFLNSTRWYRSGVFQRSRVDITQYQRTIDTRLLRNALLVLSSKIL*YIPSYPTHHCLCFATYRLTSPECLQLHKEILSPSS*RFLSSQKESITDSVSISTCFKQCSMVPQCDP  1370
                GVTYKRPFLTTVYLILS*IENASLSLRPPEWAHP*V*HIFA**TPLTL*VHLYKDDSPPSRAREVERFLNSTRWYRSGVFQRSRVDITQYQRTIDTR LRNALLVLSSKIL*YIPSYPTHHCLCFATYRLTSPECLQLHKEILSPSS*RFLSSQKESITDSVSISTCFKQCSMVPQCDP
Subject  15599  GVTYKRPFLTTVYLILS*IENASLSLRPPEWAHP*V*HIFA**TPLTL*VHLYKDDSPPSRAREVERFLNSTRWYRSGVFQRSRVDITQYQRTIDTRFLRNALLVLSSKIL*YIPSYPTHHCLCFATYRLTSPECLQLHKEILSPSS*RFLSSQKESITDSVSISTCFKQCSMVPQCDP  16135

Grapevine leafroll associated virus 2 isolate NbRGp major coat protein, 19 kDa protein, and 24 kDa protein genes, complete cds

Sequence ID: KP704583.1 Length: 1749 Number of Matches: 10

Range 1: 154 to 1542 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
775.4 bits(1686) 0.0 358/463(77%) 0/463(0%) Plus/Plus
Query        2  MMLYAIAARTTSPKVQRGDSDVLFSYGSGDRTITVTEGDLKKVLDGFAPLTRFTNKLRTMGRTFTEAYIDFCVAYKHKMPQLNAAAELGIPAEDSYLAADFLGACPKLSELQQSRKMFASMYALKTEGGVVSTPVSNLRQLGRREVM*WKSVLRIPNR*YCSAQLKTQYC*SSNLMARLIYLRY*YADICAYPATET*RDAVAKT**KISRVLITL*FVRQRYSTITNPQLRSIMTPIVW*NSF*RRVTSSGFFSEATVEEERRVICAPSSKLTISSLDRIAVPWSIV*SRY**KLSL*SILFXXXXXXXXXXXXSPYEAEDILARSTDMLRNIDSGVLDMKECIKVFSTITREVHCAKASYQWCVDTGLYQRDCAEKRLIDTIESNLRIAQPLVREKVANHLCKDEPRELVAFITRKYVKLTGVPIREAVKIEMRSLSKTVLNKLSLEMAFYMSPPLTKHTQ  1390
                ++LYA+AARTTSPKVQR DSD++F    GD+T+ VTEGDLKKVL+G APL RFTNKLRT GRTFTEAY+DFCVAYKHKMPQLNAAAELGIPAEDSYLAADFLGACPKLSELQQSRKMFASMYALKTEGGVV+TPVSNLRQLGRREVM*WK  LRI   *   AQ+KTQ+ *SS+LM +LI    *YA I A          +AKT**+I +V IT    R+RY  IT+PQL+S +T I W*NSF*++ T  GFFS+ T +EERR  CAPSSKLTISSLDRIAVPWSIV*SRY**KLSL*S LFVKKEIVKM+VIVSPYEAEDIL RST+MLRNIDSG LD +ECIK FST+TR++HCAKASYQWCVDTGL QRDCAEKRLIDT+ESNLR+AQPL+REKVA H CKDEP+ELVAFITRKYVKLTGV  REAVKIEMR+LSKTVLNKLSLEMAFYMSP   K+ +
Subject    154  LLLYALAARTTSPKVQRADSDIIFQNTYGDKTVVVTEGDLKKVLEGCAPLNRFTNKLRTFGRTFTEAYVDFCVAYKHKMPQLNAAAELGIPAEDSYLAADFLGACPKLSELQQSRKMFASMYALKTEGGVVNTPVSNLRQLGRREVM*WKFALRILRH*CYYAQIKTQHY*SSSLMMKLICRNC*YAGIYACRIAGMXLVVIAKT**RILKVHITPSSARERYGMITSPQLKSTITLIAW*NSF*KQETFFGFFSKVTSKEERRDTCAPSSKLTISSLDRIAVPWSIV*SRY**KLSL*SNLFVKKEIVKMRVIVSPYEAEDILTRSTEMLRNIDSGALDTRECIKAFSTLTRDLHCAKASYQWCVDTGLCQRDCAEKRLIDTVESNLRLAQPLIREKVATHFCKDEPKELVAFITRKYVKLTGVAAREAVKIEMRTLSKTVLNKLSLEMAFYMSPRAWKNAE  1542

Range 2: 165 to 1520 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
713.1 bits(1550) 0.0 341/452(75%) 0/452(0%) Minus/Minus
Query       13  GDI*KAISNDSLFNTVLDRERISIFTASRMGTPVSLTYFRVMNATNSLGSSLQR*FATFSRTRG*AILKFDSMVSIRRFSAQSR*YNPVSTHH*YEAFAQCTSRVIVENTLIHSFISNTPLSMFRNISVDLARMSSAS*GDXXXXXXXXXXXTKRIDYRLSFYQYLLQTMLHGTAMRSKEEIVSFEEGAQMTRRSSSTVASEKKPEDVTRL*KEFYHTMGVIILLSCGFVIVLYRCRTNYSVMSTLEIFYYVFATASRHVSVAGYAQISAY*YLR*INLAIRFDD*QYCVLSCAEQY*RFGILSTDFHHITSLLPNWRRLLTGVLTTPPSVFRAYILANIFLLCCSSESFGHAPRKSAAR*ESSAGIPNSAAALS*GILCLYATQKSIYASVKVRPIVRSLLVNLVRGANPSSTFLRSPSVTVIVLSPEPYENNTSESPL*TLGDVVLAAMA  1368
                GDI*KAIS DSLF TVLDR RISIFTASR  TPVSLTYFRVMNAT+SLGSSLQ+* ATFSR RG*A L+FDS VSI+RFSAQSR +NPVSTHH Y+AFAQC SRV VEN L+HS +SN PLSMFRNISVDL RMSSAS*GDTIT ILTISFFTKR DYRLSFYQYLLQT+LHGTAMRSKEEIVSFEEGAQ++RRSS  V  EKKP++V+  *KEF+H + VI+L +CG VI+ YR R +  VM T +I YYVFA  + H+    +A I AY*  R IN  IR DD*  CVL CA  +*   ILS +FHHITSLLPNWR+LLTGV TTPPSVF+AYILANIFLLCC+SESFG AP+KSAAR ESSAGIPNSAAALS*GILCL ATQKS YASV VRP VRSLLVNL+RGA+PSSTFLRSPSVT  VLSP  +    SES L*TLGDVVLAA A
Subject    165  GDI*KAISKDSLFKTVLDRVRISIFTASRAATPVSLTYFRVMNATSSLGSSLQK*VATFSRMRG*ASLRFDSTVSIKRFSAQSRWHNPVSTHHWYDAFAQCKSRVSVENALMHSLVSNAPLSMFRNISVDLVRMSSAS*GDTITLILTISFFTKRFDYRLSFYQYLLQTILHGTAMRSKEEIVSFEEGAQVSRRSSFDVTLEKKPKNVSCF*KEFHHAISVIVLFNCGLVIIPYRSRADDGVMCTFKILYYVFAITTSHIPAMRHA*IPAY*QFRQINFIIRLDD**CCVLICA**H*CLRILSANFHHITSLLPNWRKLLTGVFTTPPSVFKAYILANIFLLCCNSESFGQAPKKSAARYESSAGIPNSAAALS*GILCL*ATQKSTYASVNVRPKVRSLLVNLLRGAHPSSTFLRSPSVTTTVLSP*VF*KIISESAL*TLGDVVLAARA  1520

Range 3: 264 to 1520 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
637.1 bits(1384) 0.0 288/419(69%) 0/419(0%) Plus/Plus
Query      112  RGS*EGA*RICTSY*VH*QTSNYGSHFHRSVY*FLRGVQAQDASAQRSRRVGDTG*RFLPCSGFSGSMSETL*TAAKQKNVREYVRSED*RWGSKYTR*QSTPIG*EGSYVMEICTQNSESLVLLRTTQNTILLVIKSDGKVNLPKILICGYLRVSCHGDVTGCCREDIVKDFEGAHHTVIRSTTIQYDYESTAKEYNDSHCVVKFFLETGDVFWFFLRSDSRGRAARHLRTFFEANNFFFGSHCGTMEHCLKQVLIETESVIDSFCEERNR*DEGDSISL*S*RHSGEVNRYVAKHRQWCVGYEGMY*SIFDDNTRSALRKSLVSMVR*YWVISTRLR*KTPDRYHRVEFKNRSTSRAREGGESSL*R*T*RVSGVHYAKIC*TYGCAHSGGRKDRDAFSI*DSIK*TVVRNGLLYVT  1368
                R S E A*R+ TS *+H*Q +N+  H +  V *FLRG+QA DASAQR RR+GDT  RF+P  G    + ETL*   K KNV +YVR ED*   SKY R*   PI *E SYVMEIC QN E+LVLLRT QNT LLV+KSD +VNLPK+LICGYLRVS  GDV GC RED++K+FEGAHHTVIRS T++YDYES  KEYN++ CVVKFFLETGDVFWFFL+SD +GRAARHLRTFFEANNFFFGSHCGTME+CLKQVLIETESVI+SFCEERNR*DEGDSISL*S*RHS ++N  VAKHRQW VGYE ++*S+ D N R ALRKS+V MVR*+ V+ T LR KT DR+  ++ + RSTS  REGG+S L R*T R SGVH+A+I * + C  +GG K+R+A SI*DS K*T+ RNGLLYVT
Subject    264  R*SQESA*RVRTS**IH*QAANFRPHVYGGVC*FLRGLQA*DASAQRGRRIGDTSRRFVPSCGLFRCLPETL*ITTK*KNVCKYVRFED*GRSSKYAR**FAPIR*ERSYVMEICAQNPEALVLLRTNQNTTLLVVKSDDEVNLPKLLICGYLRVSHRGDVXGCNREDVIKBFEGAHHTVIRSRTVRYDYESAVKEYNNADCVVKFFLETGDVFWFFLQSDIKGRAARHLRTFFEANNFFFGSHCGTMEYCLKQVLIETESVIESFCEERNR*DEGDSISL*S*RHSNKIN*NVAKHRQWSVGYERVH*SVLDANARFALRKSIVPMVR*HRVVPT*LRRKTLDRHR*IKSETRSTSHTREGGDSFLQR*TQRTSGVHHAEIR*AHRCGGAGGCKNRNAHSI*DSFK*TIFRNGLLYVT  1520

Range 4: 158 to 217 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.6 bits(56) 0.0 12/20(60%) 0/20(0%) Plus/Plus
Query        6  CYMPSQRELHRLKFKGAILM  65
                C   SQRE HR KF+G IL+
Subject    158  CSTLSQREPHRPKFRGLILI  217

Range 5: 163 to 1536 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
559.6 bits(1215) 0.0 273/458(60%) 0/458(0%) Minus/Minus
Query       11  VFG*RG*HIKGHF*RQFI*YCLR*RTHLYLYGLPNGHTRKFNIFSRNERH*LSRFIFTKMIRHLLAHERLSDS*IRLDGIDQAFFSAVALI*PSINAPLIRGFCAMHFSCYRRKYFNTFLHIQHTTVYVSQHIG*PRQNVFSFIRRYYHLHLNDFFLHKKNRLQTQFLSVPASNNAPWYRNAIQXXXXXXXXXCANDAPLFLYCRFGEKTRRRHPSLERILPHNGSHYTP*LWIRNRTVSLSNELQCDEHPRNLLLCLRDSIPSRLRGRIRANIRILVS*VN*PCHQI**LAVLCFELCGAVLAIRNSEYRFPSHNFPPTQLA*IANGCTYYPTFSLQSVHTREHFSALLQFREFRTCSQKIRCKVRIFSRYPQLCGCVELRHLVLVRHAEINIRFCESATHSSKFVSEPSKRCKSVKHLLKIPFSNSNSPIPRTVRE*HIRIAPLNFRRCSSRCDGI  1384
                VF    *HI+GHF*R FI* CLR*  H Y Y LP  HT + N+F R+ERH*   FIF KM RHLLA+ERLS+S I  +G+DQAFF A+ L  P +NAPL+R FCA+  S  RR+ FN    IQ +TVYVSQH  *   NVFSFIRRYYH HLNDFFLHKK RLQTQFLSVPASNN PWYRNAIQRRNC*LRRRCA+ APLFL C FGEKT++R   L+RI P N  + T *L  RN TV  S+  +CD H +N LL LRD      R   R N RIL    +*  HQ * L +LCF+LC   L  ++SE +FPSHNF PT LA I NG  YY   SLQSVHT +HFS LL FREFR  + K+R  VRIF  YPQ CG VELRHL+LV HAEINIR  + A  SS+ VSE  KRC   KH L+I F + NS +  +V + +IRI+PLNF RC SRC+ +
Subject    163  VFPRSR*HIEGHF*R*FI*NCLR*SAHFYFYSLPRRHTCELNVFPRDERH*FFGFIFAKMSRHLLAYERLSESQI*FNGVDQAFFGAITLAQPCVNAPLVRCFCAVQISR*RRERFNALSRIQRSTVYVSQHFS*SC*NVFSFIRRYYHPHLNDFFLHKKIRLQTQFLSVPASNNTPWYRNAIQRRNC*LRRRCASVAPLFL*CHFGEKTKKRLLFLKRISPRNQRYCTL*LRTRNHTVPFSSG*RCDVHLQNXLLRLRDYNQXHPRDATRVNTRILTISAD*LHHQT*RLVMLCFDLCVIALVPQDSERKFPSHNFSPT*LAQITNGRIYYSALSLQSVHTCKHFSTLL*FREFRAST*KVRS*VRIFCWYPQFCGRVELRHLMLVSHAEINIRLRKRAAESSQLVSESIKRCAPFKHFLEITFCHDNSLVTVSVLKDYIRISPLNFGRCGSRCESV  1536

Range 6: 263 to 910 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
259.0 bits(559) 0.0 136/216(63%) 0/216(0%) Minus/Minus
Query      111  NQKTSPVSRKNFTTQWESLYSLAVDS*SYCIVVERITV**APSKSFTMSSRQHPVTSPWQDTRKYPHISILGKLTLPSDLMTSSIVF*VVRSSTSDSEF*VQISIT*LPSYPIGVDC*RVYLLPHLQSSERTYSRTFFCFAAVQRVSDMLPENPLQGKNLQPVSPTLRLR*AEASCACTPRRNQYTLL*KCDP*FEVC**T**EVQIRQAPS*DPL  758
                NQKTSPVS+KNFTTQ   LYSL  DS*SY  V+ER+TV* APSK F  SSR  P TSP  DTRKYPHI+  G+LT  SDL TS++VF* VR+STS S F* QISIT*L SY IG + *R YLL   QSS+RTY +TFF F  +QRVS    ++P  G NL  VSP LR R*AEAS AC PRRNQ+T  * C   F  C**  *EV+  QA S*D L
Subject    263  NQKTSPVSKKNFTTQSALLYSLTADS*SYRTVLERMTV*CAPSKXFITSSRLQPXTSPRCDTRKYPHINNFGRLTSSSDLTTSNVVF*FVRNSTSASGF*AQISIT*LLSYLIGANY*RAYLLLRPQSSKRTYLQTFFYFVVIQRVSGKHLKSPQLGTNLLLVSPILRPR*AEASYACKPRRNQHTPP*TCGRKFAAC**IY*EVRTLQALS*DHL  910

Range 7: 986 to 1519 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
248.5 bits(536) 0.0 121/178(68%) 0/178(0%) Minus/Minus
Query      834  VTYKRPFLTTVYLILS*IENASLSLRPPEWAHP*V*HIFA**TPLTL*VHLYKDDSPPSRAREVERFLNSTRWYRSGVFQRSRVDITQYQRTIDTRLLRNALLVLSSKIL*YIPSYPTHHCLCFATYRLTSPECLQLHKEILSPSS*RFLSSQKESITDSVSISTCFKQCSMVPQCDP  1367
                VTY+RPFL  VYL LS*IE A L L+PP   H * * I A**TPL L VHL K++SPPSR  EVER  +  +  RS VF+R+ V  T  QRTI T LLR+A L L+S+ L*   SYPT HCLCFAT++L   ECLQLHKEILSPSS*RFLSSQK+SITDSVSISTCFKQ SMVPQCDP
Subject    986  VTYRRPFLKIVYLKLS*IECAFLFLQPPAPPHL*A*RISA**TPLVLWVHLCKNESPPSRV*EVERVSDLIQRCRSSVFRRNHVGTTLCQRTIGTMLLRSANLALASRTL*CTLSYPTLHCLCFATFQLILLECLQLHKEILSPSS*RFLSSQKDSITDSVSISTCFKQYSMVPQCDP  1519

Range 8: 170 to 217 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.9 bits(48) 0.0 11/16(69%) 0/16(0%) Minus/Minus
Query       18  HQNRPFEL*AM*FSLR  65
                +QN+P EL AM FSLR
Subject    170  YQNQPSELWAMWFSLR  217

Range 9: 707 to 1543 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
348.8 bits(755) 0.0 175/279(63%) 0/279(0%) Plus/Plus
Query      555  NMRIFARILPRRRDGMLSRRHSKRFRGCSSHCNSFDNDTVRLRIHS*GV**LPLCGKILSRDG*RLLVFSPKRQ*RKSGASFAHLLRS*QFLLWIALRYHGALFEAGTDRN*VCNRFFL*RKKSLR*R**YLLMKLKTFWRGQPICCET*TVVCWI*RNVLKYFRR*HEKCIAQKPRINGALILGYINATALKNA*SIPSSRI*ESLNLSCARRWRIIFVKMNLES*WRSLRENMLNLRVCPFGRP*R*RCVLYLRQY*INCR*KWPFICHPR*PNTPN  1391
                NMR+F R+  R    + SRR +K F  C+SH +  +N TV LR+ S* V *  L G+IL R+  R LVFSPK   RKSGA+ AHLLRS*QFLLWIALRYHG LFEAGTDRN*VCNR FL*RKKSLR* **YLLMKLKTF + Q  CCET*TV  WI  + LK  RR* E C AQK R NGAL  G  N  A KNA*S P ++I*+SLNLS ARRWR+IF KMN ++*WRS R N L+ +V   GR *+*+C LYLRQ+*IN  *KWP ICH     T N
Subject    707  NMRVFTRVASRGCXWL*SRRRNKXF*RCTSHRHPLENGTV*LRVRS*RVQ*R*LRGEILFRNRRRFLVFSPK*HQRKSGATLAHLLRS*QFLLWIALRYHGVLFEAGTDRN*VCNRIFL*RKKSLR*G**YLLMKLKTF*QDQLKCCET*TVERWIRESALKRSRR*REICTAQKHRTNGALTQGCANVIAPKNA*STPLNQI*DSLNLSYARRWRLIFAKMNPKN*WRSSRGNTLSSQVWRRGRL*K*KCALYLRQF*INYL*KWPSICHLERGKTQN  1543

Range 10: 317 to 679 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
149.5 bits(320) 0.0 71/121(59%) 0/121(0%) Plus/Plus
Query      165  TNFELWVALSQKRILISAWRTSTRCLSSTQPQSWGYRLKILTLQRIFWEHVRNSLNCSKAEKCSRVCTL*RLKVG**VHPLAIYANWVGGKLCDGNLYSEFRIASTAPHNSKHNTASHQI*  527
                T+ EL  A  ++R+LISAW TS RCLSST+PQ+WGY+ KI T  R F    RNSLN +K EKC +VCTL*RL+  **+ PL I AN VG KLCDGNL SE    S   H SKHN  S Q+*
Subject    317  TSCELSAARLRRRMLISAWLTSIRCLSSTRPQNWGYQQKIRT*LRTF*VLARNSLNYNKVEKCLQVCTL*RLRAE**IRPLVICAN*VGEKLCDGNLRSES*GTSAITHKSKHNITSRQV*  679

Grapevine rootstock stem lesion associated virus, complete genome

Sequence ID: NC_004724.1 Length: 16527 Number of Matches: 10

Range 1: 14757 to 16145 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
771.3 bits(1677) 0.0 357/463(77%) 0/463(0%) Plus/Plus
Query        2  MMLYAIAARTTSPKVQRGDSDVLFSYGSGDRTITVTEGDLKKVLDGFAPLTRFTNKLRTMGRTFTEAYIDFCVAYKHKMPQLNAAAELGIPAEDSYLAADFLGACPKLSELQQSRKMFASMYALKTEGGVVSTPVSNLRQLGRREVM*WKSVLRIPNR*YCSAQLKTQYC*SSNLMARLIYLRY*YADICAYPATET*RDAVAKT**KISRVLITL*FVRQRYSTITNPQLRSIMTPIVW*NSF*RRVTSSGFFSEATVEEERRVICAPSSKLTISSLDRIAVPWSIV*SRY**KLSL*SILFXXXXXXXXXXXXSPYEAEDILARSTDMLRNIDSGVLDMKECIKVFSTITREVHCAKASYQWCVDTGLYQRDCAEKRLIDTIESNLRIAQPLVREKVANHLCKDEPRELVAFITRKYVKLTGVPIREAVKIEMRSLSKTVLNKLSLEMAFYMSPPLTKHTQ  1390
                ++LYA+AARTTSPKVQR DSD++F    GD+T+ VTEGDLKKVL+G APL RFTNKLRT GRTFTEAY+DFCVAYKHKMPQLNAAAELGIPAEDSYLAADFLGACPKLSELQQSRKMFASMYALKTEGGVV+TPVSNLRQLGRREVM*WK  LRI   *   AQ+KTQ+ *SS+LM +LI    *YA I A      *   +AKT**+I +V IT    R+R   IT+PQL+S +T I W*NSF*++ T  GFFS+ T +EERR  CAPSSKLTISSLDRIAVPWSIV*SRY**KLSL*S LFVKKEIVKM+VIVSPYEAEDIL RST+MLRNIDSG LD +ECIK FST+TR++HCAKASYQWCVDTGL QRDCAEKRLIDT+ESNLR+A PL+REKVA H CKDEP+ELVAFITRKYVKLTGV  REAVKIEMR+LSKTVLNKLSLEMAFYMSP   K+ +
Subject  14757  LLLYALAARTTSPKVQRADSDIIFQNTYGDKTVVVTEGDLKKVLEGCAPLNRFTNKLRTFGRTFTEAYVDFCVAYKHKMPQLNAAAELGIPAEDSYLAADFLGACPKLSELQQSRKMFASMYALKTEGGVVNTPVSNLRQLGRREVM*WKFALRILRH*CYYAQIKTQHY*SSSLMMKLICRNC*YAGIYACRIAGM*LVVIAKT**RILKVHITPSSARERSGMITSPQLKSTITLIAW*NSF*KQETFFGFFSKVTSKEERRDTCAPSSKLTISSLDRIAVPWSIV*SRY**KLSL*SNLFVKKEIVKMRVIVSPYEAEDILTRSTEMLRNIDSGALDTRECIKAFSTLTRDLHCAKASYQWCVDTGLCQRDCAEKRLIDTVESNLRLAHPLIREKVATHFCKDEPKELVAFITRKYVKLTGVAAREAVKIEMRTLSKTVLNKLSLEMAFYMSPRAWKNAE  16145

Range 2: 14768 to 16123 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
708.5 bits(1540) 0.0 340/452(75%) 0/452(0%) Minus/Minus
Query       13  GDI*KAISNDSLFNTVLDRERISIFTASRMGTPVSLTYFRVMNATNSLGSSLQR*FATFSRTRG*AILKFDSMVSIRRFSAQSR*YNPVSTHH*YEAFAQCTSRVIVENTLIHSFISNTPLSMFRNISVDLARMSSAS*GDXXXXXXXXXXXTKRIDYRLSFYQYLLQTMLHGTAMRSKEEIVSFEEGAQMTRRSSSTVASEKKPEDVTRL*KEFYHTMGVIILLSCGFVIVLYRCRTNYSVMSTLEIFYYVFATASRHVSVAGYAQISAY*YLR*INLAIRFDD*QYCVLSCAEQY*RFGILSTDFHHITSLLPNWRRLLTGVLTTPPSVFRAYILANIFLLCCSSESFGHAPRKSAAR*ESSAGIPNSAAALS*GILCLYATQKSIYASVKVRPIVRSLLVNLVRGANPSSTFLRSPSVTVIVLSPEPYENNTSESPL*TLGDVVLAAMA  1368
                GDI*KAIS DSLF TVLDR RISIFTASR  TPVSLTYFRVMNAT+SLGSSLQ+* ATFSR RG*A L+FDS VSI+RFSAQSR +NPVSTHH Y+AFAQC SRV VEN L+HS +SN PLSMFRNISVDL RMSSAS*GDTIT ILTISFFTKR DYRLSFYQYLLQT+LHGTAMRSKEEIVSFEEGAQ++RRSS  V  EKKP++V+  *KEF+H + VI+L +CG VI+  R R +  VM T +I YYVFA  + H+    +A I AY*  R IN  IR DD*  CVL CA  +*   ILS +FHHITSLLPNWR+LLTGV TTPPSVF+AYILANIFLLCC+SESFG AP+KSAAR ESSAGIPNSAAALS*GILCL ATQKS YASV VRP VRSLLVNL+RGA+PSSTFLRSPSVT  VLSP  +    SES L*TLGDVVLAA A
Subject  14768  GDI*KAISKDSLFKTVLDRVRISIFTASRAATPVSLTYFRVMNATSSLGSSLQK*VATFSRMRG*ASLRFDSTVSIKRFSAQSRWHNPVSTHHWYDAFAQCKSRVSVENALMHSLVSNAPLSMFRNISVDLVRMSSAS*GDTITLILTISFFTKRFDYRLSFYQYLLQTILHGTAMRSKEEIVSFEEGAQVSRRSSFDVTLEKKPKNVSCF*KEFHHAISVIVLFNCGLVIIPDRSRADDGVMCTFKILYYVFAITTSHIPAMRHA*IPAY*QFRQINFIIRLDD**CCVLICA**H*CLRILSANFHHITSLLPNWRKLLTGVFTTPPSVFKAYILANIFLLCCNSESFGQAPKKSAARYESSAGIPNSAAALS*GILCL*ATQKSTYASVNVRPKVRSLLVNLLRGAHPSSTFLRSPSVTTTVLSP*VF*KIISESAL*TLGDVVLAARA  16123

Range 3: 14867 to 16123 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
640.3 bits(1391) 0.0 289/419(69%) 0/419(0%) Plus/Plus
Query      112  RGS*EGA*RICTSY*VH*QTSNYGSHFHRSVY*FLRGVQAQDASAQRSRRVGDTG*RFLPCSGFSGSMSETL*TAAKQKNVREYVRSED*RWGSKYTR*QSTPIG*EGSYVMEICTQNSESLVLLRTTQNTILLVIKSDGKVNLPKILICGYLRVSCHGDVTGCCREDIVKDFEGAHHTVIRSTTIQYDYESTAKEYNDSHCVVKFFLETGDVFWFFLRSDSRGRAARHLRTFFEANNFFFGSHCGTMEHCLKQVLIETESVIDSFCEERNR*DEGDSISL*S*RHSGEVNRYVAKHRQWCVGYEGMY*SIFDDNTRSALRKSLVSMVR*YWVISTRLR*KTPDRYHRVEFKNRSTSRAREGGESSL*R*T*RVSGVHYAKIC*TYGCAHSGGRKDRDAFSI*DSIK*TVVRNGLLYVT  1368
                R S E A*R+ TS *+H*Q +N+  H +  V *FLRG+QA DASAQR RR+GDT  RF+P  G    + ETL*   K KNV +YVR ED*   SKY R*   PI *E SYVMEIC QN E+LVLLRT QNT LLV+KSD +VNLPK+LICGYLRVS  GDVTGC RED++KDFEGAHHTVIRS T++YDYES  KEYN++ CVVKFFLETGDVFWFFL+SD +GRAARHLRTFFEANNFFFGSHCGTME+CLKQVLIETESVI+SFCEERNR*DEGDSISL*S*RHS ++N  VAKHRQW VGYE ++*S+ D N R ALRKS+V MVR*+ V+ T LR KT DR+  ++ + RS S  REGG+S L R*T R SGVH+A+I * + C  +GG K+R+A SI*DS K*T+ RNGLLYVT
Subject  14867  R*SQESA*RVRTS**IH*QAANFRPHVYGGVC*FLRGLQA*DASAQRGRRIGDTSRRFVPSCGLFRCLPETL*ITTK*KNVCKYVRFED*GRSSKYAR**FAPIR*ERSYVMEICAQNPEALVLLRTNQNTTLLVVKSDDEVNLPKLLICGYLRVSHRGDVTGCNREDVIKDFEGAHHTVIRSRTVRYDYESAVKEYNNADCVVKFFLETGDVFWFFLQSDIKGRAARHLRTFFEANNFFFGSHCGTMEYCLKQVLIETESVIESFCEERNR*DEGDSISL*S*RHSNKIN*NVAKHRQWSVGYERVH*SVLDANARFALRKSIVPMVR*HRVVPT*LRRKTLDRHR*IKSETRSPSHTREGGDSFLQR*TQRTSGVHHAEIR*AHRCGGAGGCKNRNAHSI*DSFK*TIFRNGLLYVT  16123

Range 4: 14761 to 14820 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.6 bits(56) 0.0 12/20(60%) 0/20(0%) Plus/Plus
Query        6  CYMPSQRELHRLKFKGAILM  65
                C   SQRE HR KF+G IL+
Subject  14761  CSTLSQREPHRPKFRGLILI  14820

Range 5: 14766 to 16139 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
556.4 bits(1208) 0.0 272/458(59%) 0/458(0%) Minus/Minus
Query       11  VFG*RG*HIKGHF*RQFI*YCLR*RTHLYLYGLPNGHTRKFNIFSRNERH*LSRFIFTKMIRHLLAHERLSDS*IRLDGIDQAFFSAVALI*PSINAPLIRGFCAMHFSCYRRKYFNTFLHIQHTTVYVSQHIG*PRQNVFSFIRRYYHLHLNDFFLHKKNRLQTQFLSVPASNNAPWYRNAIQXXXXXXXXXCANDAPLFLYCRFGEKTRRRHPSLERILPHNGSHYTP*LWIRNRTVSLSNELQCDEHPRNLLLCLRDSIPSRLRGRIRANIRILVS*VN*PCHQI**LAVLCFELCGAVLAIRNSEYRFPSHNFPPTQLA*IANGCTYYPTFSLQSVHTREHFSALLQFREFRTCSQKIRCKVRIFSRYPQLCGCVELRHLVLVRHAEINIRFCESATHSSKFVSEPSKRCKSVKHLLKIPFSNSNSPIPRTVRE*HIRIAPLNFRRCSSRCDGI  1384
                VF    *HI+GHF*R FI* CLR*  H Y Y LP  HT + N+F R+ERH*   FIF KM RHLLA+ER+S+S I  +G+DQAFF A+ L  P +NAPL+R FCA+  S  RR+ FN    IQ +TVYVSQH  *   NVFSFIRRYYH HLNDFFLHKK RLQTQFLSVPASNN PWYRNAIQRRNC*LRRRCA+ APLFL C FGEKT++R   L+RI P N  + T *L  RN T   S+  +CD H +N LL LRD   S  R   R N RIL    +*  HQ * L +LCF+LC   L  ++SE +FPSHNF PT LA I NG  YY   SLQSVHT +HFS LL FREFR  + K+R  VRIF  YPQ CG VELRHL+LV HAEINIR  + A  SS+ VSE  KRC   KH L+I F + NS +  +V + +IRI+PLNF RC SRC+ +
Subject  14766  VFPRSR*HIEGHF*R*FI*NCLR*SAHFYFYSLPRRHTCELNVFPRDERH*FFGFIFAKMSRHLLAYERVSESQI*FNGVDQAFFGAITLAQPCVNAPLVRCFCAVQISR*RRERFNALSRIQRSTVYVSQHFS*SC*NVFSFIRRYYHPHLNDFFLHKKIRLQTQFLSVPASNNTPWYRNAIQRRNC*LRRRCASVAPLFL*CHFGEKTKKRLLFLKRISPRNQRYCTL*LRTRNHTGPFSSG*RCDVHLQNPLLRLRDYNQSHPRDATRVNTRILTISAD*LHHQT*RLVMLCFDLCVIALVPQDSERKFPSHNFSPT*LAQITNGRIYYSALSLQSVHTCKHFSTLL*FREFRAST*KVRS*VRIFCWYPQFCGRVELRHLMLVSHAEINIRLRKRAAESSQLVSESIKRCAPFKHFLEITFCHDNSLVTVSVLKDYIRISPLNFGRCGSRCESV  16139

Range 6: 14866 to 15513 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
263.6 bits(569) 0.0 138/216(64%) 0/216(0%) Minus/Minus
Query      111  NQKTSPVSRKNFTTQWESLYSLAVDS*SYCIVVERITV**APSKSFTMSSRQHPVTSPWQDTRKYPHISILGKLTLPSDLMTSSIVF*VVRSSTSDSEF*VQISIT*LPSYPIGVDC*RVYLLPHLQSSERTYSRTFFCFAAVQRVSDMLPENPLQGKNLQPVSPTLRLR*AEASCACTPRRNQYTLL*KCDP*FEVC**T**EVQIRQAPS*DPL  758
                NQKTSPVS+KNFTTQ   LYSL  DS*SY  V+ER+TV* APSKSF  SSR  PVTSP  DTRKYPHI+  G+LT  SDL TS++VF* VR+STS S F* QISIT*L SY IG + *R YLL   QSS+RTY +TFF F  +QRVS    ++P  G NL  VSP LR R*AEAS AC PRRNQ+T  * C   F  C**  *EV+  QA S*D L
Subject  14866  NQKTSPVSKKNFTTQSALLYSLTADS*SYRTVLERMTV*CAPSKSFITSSRLQPVTSPRCDTRKYPHINNFGRLTSSSDLTTSNVVF*FVRNSTSASGF*AQISIT*LLSYLIGANY*RAYLLLRPQSSKRTYLQTFFYFVVIQRVSGKHLKSPQLGTNLLLVSPILRPR*AEASYACKPRRNQHTPP*TCGRKFAAC**IY*EVRTLQALS*DHL  15513

Range 7: 15589 to 16122 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
245.3 bits(529) 0.0 120/178(67%) 0/178(0%) Minus/Minus
Query      834  VTYKRPFLTTVYLILS*IENASLSLRPPEWAHP*V*HIFA**TPLTL*VHLYKDDSPPSRAREVERFLNSTRWYRSGVFQRSRVDITQYQRTIDTRLLRNALLVLSSKIL*YIPSYPTHHCLCFATYRLTSPECLQLHKEILSPSS*RFLSSQKESITDSVSISTCFKQCSMVPQCDP  1367
                VTY+RPFL  VYL LS*IE A L L+PP   H * * I A**TPL L VHL K++SPPSR  E ER  +  +  RS VF+R+ V  T  QRTI T LLR+A L L+S+ L*   SYPT HCLCFAT++L   ECLQLHKEILSPSS*RFLSSQK+SITDSVSISTCFKQ SMVPQCDP
Subject  15589  VTYRRPFLKIVYLKLS*IECAFLFLQPPAPPHL*A*RISA**TPLVLWVHLCKNESPPSRV*EGERVSDLIQRCRSSVFRRNHVGTTLCQRTIGTMLLRSANLALASRTL*CTLSYPTLHCLCFATFQLILLECLQLHKEILSPSS*RFLSSQKDSITDSVSISTCFKQYSMVPQCDP  16122

Range 8: 14773 to 14820 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.9 bits(48) 0.0 11/16(69%) 0/16(0%) Minus/Minus
Query       18  HQNRPFEL*AM*FSLR  65
                +QN+P EL AM FSLR
Subject  14773  YQNQPSELWAMWFSLR  14820

Range 9: 15310 to 16146 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
346.1 bits(749) 0.0 174/279(62%) 0/279(0%) Plus/Plus
Query      555  NMRIFARILPRRRDGMLSRRHSKRFRGCSSHCNSFDNDTVRLRIHS*GV**LPLCGKILSRDG*RLLVFSPKRQ*RKSGASFAHLLRS*QFLLWIALRYHGALFEAGTDRN*VCNRFFL*RKKSLR*R**YLLMKLKTFWRGQPICCET*TVVCWI*RNVLKYFRR*HEKCIAQKPRINGALILGYINATALKNA*SIPSSRI*ESLNLSCARRWRIIFVKMNLES*WRSLRENMLNLRVCPFGRP*R*RCVLYLRQY*INCR*KWPFICHPR*PNTPN  1391
                NMR+F R+  R  D + SRR +K F  C+SH +  +N  V LR+ S* V *  L G+IL R+  R LVFSPK   RKSGA+ AHLLRS*QFLLWIALRYHG LFEAGTDRN*VCNR FL*RKKSLR* **YLLMKLKTF + Q  CCET*TV  WI  + LK  RR* E C AQK R NGAL  G  N  A KNA*S P ++I*+SL LS ARRWR+IF KMN ++*WRS R N L+ +V   GR *+*+C LYLRQ+*IN  *KWP ICH     T N
Subject  15310  NMRVFTRVASRGCDWL*SRRRNKGF*RCTSHRHPLENGPV*LRVRS*RVQ*R*LRGEILFRNRRRFLVFSPK*HQRKSGATLAHLLRS*QFLLWIALRYHGVLFEAGTDRN*VCNRIFL*RKKSLR*G**YLLMKLKTF*QDQLKCCET*TVERWIRESALKRSRR*REICTAQKHRTNGALTQGCANVIAPKNA*STPLNQI*DSLTLSYARRWRLIFAKMNPKN*WRSSRGNTLSSQVWRRGRL*K*KCALYLRQF*INYL*KWPSICHLERGKTQN  16146

Range 10: 14920 to 15282 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
149.5 bits(320) 0.0 71/121(59%) 0/121(0%) Plus/Plus
Query      165  TNFELWVALSQKRILISAWRTSTRCLSSTQPQSWGYRLKILTLQRIFWEHVRNSLNCSKAEKCSRVCTL*RLKVG**VHPLAIYANWVGGKLCDGNLYSEFRIASTAPHNSKHNTASHQI*  527
                T+ EL  A  ++R+LISAW TS RCLSST+PQ+WGY+ KI T  R F    RNSLN +K EKC +VCTL*RL+  **+ PL I AN VG KLCDGNL SE    S   H SKHN  S Q+*
Subject  14920  TSCELSAARLRRRMLISAWLTSIRCLSSTRPQNWGYQQKIRT*LRTF*VLARNSLNYNKVEKCLQVCTL*RLRAE**IRPLVICAN*VGEKLCDGNLRSES*GTSAITHKSKHNITSRQV*  15282

Grapevine rootstock stem lesion associated virus methyltransferase/helicase polyprotein, RNA dependent RNA polymerase, p6, HSP70 like protein, HSP90 like protein, coat protein duplicate, coat protein, p19, and p24 genes, complete cds

Sequence ID: AF314061.1 Length: 16527 Number of Matches: 10

Range 1: 14757 to 16145 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
771.3 bits(1677) 0.0 357/463(77%) 0/463(0%) Plus/Plus
Query        2  MMLYAIAARTTSPKVQRGDSDVLFSYGSGDRTITVTEGDLKKVLDGFAPLTRFTNKLRTMGRTFTEAYIDFCVAYKHKMPQLNAAAELGIPAEDSYLAADFLGACPKLSELQQSRKMFASMYALKTEGGVVSTPVSNLRQLGRREVM*WKSVLRIPNR*YCSAQLKTQYC*SSNLMARLIYLRY*YADICAYPATET*RDAVAKT**KISRVLITL*FVRQRYSTITNPQLRSIMTPIVW*NSF*RRVTSSGFFSEATVEEERRVICAPSSKLTISSLDRIAVPWSIV*SRY**KLSL*SILFXXXXXXXXXXXXSPYEAEDILARSTDMLRNIDSGVLDMKECIKVFSTITREVHCAKASYQWCVDTGLYQRDCAEKRLIDTIESNLRIAQPLVREKVANHLCKDEPRELVAFITRKYVKLTGVPIREAVKIEMRSLSKTVLNKLSLEMAFYMSPPLTKHTQ  1390
                ++LYA+AARTTSPKVQR DSD++F    GD+T+ VTEGDLKKVL+G APL RFTNKLRT GRTFTEAY+DFCVAYKHKMPQLNAAAELGIPAEDSYLAADFLGACPKLSELQQSRKMFASMYALKTEGGVV+TPVSNLRQLGRREVM*WK  LRI   *   AQ+KTQ+ *SS+LM +LI    *YA I A      *   +AKT**+I +V IT    R+R   IT+PQL+S +T I W*NSF*++ T  GFFS+ T +EERR  CAPSSKLTISSLDRIAVPWSIV*SRY**KLSL*S LFVKKEIVKM+VIVSPYEAEDIL RST+MLRNIDSG LD +ECIK FST+TR++HCAKASYQWCVDTGL QRDCAEKRLIDT+ESNLR+A PL+REKVA H CKDEP+ELVAFITRKYVKLTGV  REAVKIEMR+LSKTVLNKLSLEMAFYMSP   K+ +
Subject  14757  LLLYALAARTTSPKVQRADSDIIFQNTYGDKTVVVTEGDLKKVLEGCAPLNRFTNKLRTFGRTFTEAYVDFCVAYKHKMPQLNAAAELGIPAEDSYLAADFLGACPKLSELQQSRKMFASMYALKTEGGVVNTPVSNLRQLGRREVM*WKFALRILRH*CYYAQIKTQHY*SSSLMMKLICRNC*YAGIYACRIAGM*LVVIAKT**RILKVHITPSSARERSGMITSPQLKSTITLIAW*NSF*KQETFFGFFSKVTSKEERRDTCAPSSKLTISSLDRIAVPWSIV*SRY**KLSL*SNLFVKKEIVKMRVIVSPYEAEDILTRSTEMLRNIDSGALDTRECIKAFSTLTRDLHCAKASYQWCVDTGLCQRDCAEKRLIDTVESNLRLAHPLIREKVATHFCKDEPKELVAFITRKYVKLTGVAAREAVKIEMRTLSKTVLNKLSLEMAFYMSPRAWKNAE  16145

Range 2: 14768 to 16123 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
708.5 bits(1540) 0.0 340/452(75%) 0/452(0%) Minus/Minus
Query       13  GDI*KAISNDSLFNTVLDRERISIFTASRMGTPVSLTYFRVMNATNSLGSSLQR*FATFSRTRG*AILKFDSMVSIRRFSAQSR*YNPVSTHH*YEAFAQCTSRVIVENTLIHSFISNTPLSMFRNISVDLARMSSAS*GDXXXXXXXXXXXTKRIDYRLSFYQYLLQTMLHGTAMRSKEEIVSFEEGAQMTRRSSSTVASEKKPEDVTRL*KEFYHTMGVIILLSCGFVIVLYRCRTNYSVMSTLEIFYYVFATASRHVSVAGYAQISAY*YLR*INLAIRFDD*QYCVLSCAEQY*RFGILSTDFHHITSLLPNWRRLLTGVLTTPPSVFRAYILANIFLLCCSSESFGHAPRKSAAR*ESSAGIPNSAAALS*GILCLYATQKSIYASVKVRPIVRSLLVNLVRGANPSSTFLRSPSVTVIVLSPEPYENNTSESPL*TLGDVVLAAMA  1368
                GDI*KAIS DSLF TVLDR RISIFTASR  TPVSLTYFRVMNAT+SLGSSLQ+* ATFSR RG*A L+FDS VSI+RFSAQSR +NPVSTHH Y+AFAQC SRV VEN L+HS +SN PLSMFRNISVDL RMSSAS*GDTIT ILTISFFTKR DYRLSFYQYLLQT+LHGTAMRSKEEIVSFEEGAQ++RRSS  V  EKKP++V+  *KEF+H + VI+L +CG VI+  R R +  VM T +I YYVFA  + H+    +A I AY*  R IN  IR DD*  CVL CA  +*   ILS +FHHITSLLPNWR+LLTGV TTPPSVF+AYILANIFLLCC+SESFG AP+KSAAR ESSAGIPNSAAALS*GILCL ATQKS YASV VRP VRSLLVNL+RGA+PSSTFLRSPSVT  VLSP  +    SES L*TLGDVVLAA A
Subject  14768  GDI*KAISKDSLFKTVLDRVRISIFTASRAATPVSLTYFRVMNATSSLGSSLQK*VATFSRMRG*ASLRFDSTVSIKRFSAQSRWHNPVSTHHWYDAFAQCKSRVSVENALMHSLVSNAPLSMFRNISVDLVRMSSAS*GDTITLILTISFFTKRFDYRLSFYQYLLQTILHGTAMRSKEEIVSFEEGAQVSRRSSFDVTLEKKPKNVSCF*KEFHHAISVIVLFNCGLVIIPDRSRADDGVMCTFKILYYVFAITTSHIPAMRHA*IPAY*QFRQINFIIRLDD**CCVLICA**H*CLRILSANFHHITSLLPNWRKLLTGVFTTPPSVFKAYILANIFLLCCNSESFGQAPKKSAARYESSAGIPNSAAALS*GILCL*ATQKSTYASVNVRPKVRSLLVNLLRGAHPSSTFLRSPSVTTTVLSP*VF*KIISESAL*TLGDVVLAARA  16123

Range 3: 14867 to 16123 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
640.3 bits(1391) 0.0 289/419(69%) 0/419(0%) Plus/Plus
Query      112  RGS*EGA*RICTSY*VH*QTSNYGSHFHRSVY*FLRGVQAQDASAQRSRRVGDTG*RFLPCSGFSGSMSETL*TAAKQKNVREYVRSED*RWGSKYTR*QSTPIG*EGSYVMEICTQNSESLVLLRTTQNTILLVIKSDGKVNLPKILICGYLRVSCHGDVTGCCREDIVKDFEGAHHTVIRSTTIQYDYESTAKEYNDSHCVVKFFLETGDVFWFFLRSDSRGRAARHLRTFFEANNFFFGSHCGTMEHCLKQVLIETESVIDSFCEERNR*DEGDSISL*S*RHSGEVNRYVAKHRQWCVGYEGMY*SIFDDNTRSALRKSLVSMVR*YWVISTRLR*KTPDRYHRVEFKNRSTSRAREGGESSL*R*T*RVSGVHYAKIC*TYGCAHSGGRKDRDAFSI*DSIK*TVVRNGLLYVT  1368
                R S E A*R+ TS *+H*Q +N+  H +  V *FLRG+QA DASAQR RR+GDT  RF+P  G    + ETL*   K KNV +YVR ED*   SKY R*   PI *E SYVMEIC QN E+LVLLRT QNT LLV+KSD +VNLPK+LICGYLRVS  GDVTGC RED++KDFEGAHHTVIRS T++YDYES  KEYN++ CVVKFFLETGDVFWFFL+SD +GRAARHLRTFFEANNFFFGSHCGTME+CLKQVLIETESVI+SFCEERNR*DEGDSISL*S*RHS ++N  VAKHRQW VGYE ++*S+ D N R ALRKS+V MVR*+ V+ T LR KT DR+  ++ + RS S  REGG+S L R*T R SGVH+A+I * + C  +GG K+R+A SI*DS K*T+ RNGLLYVT
Subject  14867  R*SQESA*RVRTS**IH*QAANFRPHVYGGVC*FLRGLQA*DASAQRGRRIGDTSRRFVPSCGLFRCLPETL*ITTK*KNVCKYVRFED*GRSSKYAR**FAPIR*ERSYVMEICAQNPEALVLLRTNQNTTLLVVKSDDEVNLPKLLICGYLRVSHRGDVTGCNREDVIKDFEGAHHTVIRSRTVRYDYESAVKEYNNADCVVKFFLETGDVFWFFLQSDIKGRAARHLRTFFEANNFFFGSHCGTMEYCLKQVLIETESVIESFCEERNR*DEGDSISL*S*RHSNKIN*NVAKHRQWSVGYERVH*SVLDANARFALRKSIVPMVR*HRVVPT*LRRKTLDRHR*IKSETRSPSHTREGGDSFLQR*TQRTSGVHHAEIR*AHRCGGAGGCKNRNAHSI*DSFK*TIFRNGLLYVT  16123

Range 4: 14761 to 14820 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.6 bits(56) 0.0 12/20(60%) 0/20(0%) Plus/Plus
Query        6  CYMPSQRELHRLKFKGAILM  65
                C   SQRE HR KF+G IL+
Subject  14761  CSTLSQREPHRPKFRGLILI  14820

Range 5: 14766 to 16139 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
556.4 bits(1208) 0.0 272/458(59%) 0/458(0%) Minus/Minus
Query       11  VFG*RG*HIKGHF*RQFI*YCLR*RTHLYLYGLPNGHTRKFNIFSRNERH*LSRFIFTKMIRHLLAHERLSDS*IRLDGIDQAFFSAVALI*PSINAPLIRGFCAMHFSCYRRKYFNTFLHIQHTTVYVSQHIG*PRQNVFSFIRRYYHLHLNDFFLHKKNRLQTQFLSVPASNNAPWYRNAIQXXXXXXXXXCANDAPLFLYCRFGEKTRRRHPSLERILPHNGSHYTP*LWIRNRTVSLSNELQCDEHPRNLLLCLRDSIPSRLRGRIRANIRILVS*VN*PCHQI**LAVLCFELCGAVLAIRNSEYRFPSHNFPPTQLA*IANGCTYYPTFSLQSVHTREHFSALLQFREFRTCSQKIRCKVRIFSRYPQLCGCVELRHLVLVRHAEINIRFCESATHSSKFVSEPSKRCKSVKHLLKIPFSNSNSPIPRTVRE*HIRIAPLNFRRCSSRCDGI  1384
                VF    *HI+GHF*R FI* CLR*  H Y Y LP  HT + N+F R+ERH*   FIF KM RHLLA+ER+S+S I  +G+DQAFF A+ L  P +NAPL+R FCA+  S  RR+ FN    IQ +TVYVSQH  *   NVFSFIRRYYH HLNDFFLHKK RLQTQFLSVPASNN PWYRNAIQRRNC*LRRRCA+ APLFL C FGEKT++R   L+RI P N  + T *L  RN T   S+  +CD H +N LL LRD   S  R   R N RIL    +*  HQ * L +LCF+LC   L  ++SE +FPSHNF PT LA I NG  YY   SLQSVHT +HFS LL FREFR  + K+R  VRIF  YPQ CG VELRHL+LV HAEINIR  + A  SS+ VSE  KRC   KH L+I F + NS +  +V + +IRI+PLNF RC SRC+ +
Subject  14766  VFPRSR*HIEGHF*R*FI*NCLR*SAHFYFYSLPRRHTCELNVFPRDERH*FFGFIFAKMSRHLLAYERVSESQI*FNGVDQAFFGAITLAQPCVNAPLVRCFCAVQISR*RRERFNALSRIQRSTVYVSQHFS*SC*NVFSFIRRYYHPHLNDFFLHKKIRLQTQFLSVPASNNTPWYRNAIQRRNC*LRRRCASVAPLFL*CHFGEKTKKRLLFLKRISPRNQRYCTL*LRTRNHTGPFSSG*RCDVHLQNPLLRLRDYNQSHPRDATRVNTRILTISAD*LHHQT*RLVMLCFDLCVIALVPQDSERKFPSHNFSPT*LAQITNGRIYYSALSLQSVHTCKHFSTLL*FREFRAST*KVRS*VRIFCWYPQFCGRVELRHLMLVSHAEINIRLRKRAAESSQLVSESIKRCAPFKHFLEITFCHDNSLVTVSVLKDYIRISPLNFGRCGSRCESV  16139

Range 6: 14866 to 15513 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
263.6 bits(569) 0.0 138/216(64%) 0/216(0%) Minus/Minus
Query      111  NQKTSPVSRKNFTTQWESLYSLAVDS*SYCIVVERITV**APSKSFTMSSRQHPVTSPWQDTRKYPHISILGKLTLPSDLMTSSIVF*VVRSSTSDSEF*VQISIT*LPSYPIGVDC*RVYLLPHLQSSERTYSRTFFCFAAVQRVSDMLPENPLQGKNLQPVSPTLRLR*AEASCACTPRRNQYTLL*KCDP*FEVC**T**EVQIRQAPS*DPL  758
                NQKTSPVS+KNFTTQ   LYSL  DS*SY  V+ER+TV* APSKSF  SSR  PVTSP  DTRKYPHI+  G+LT  SDL TS++VF* VR+STS S F* QISIT*L SY IG + *R YLL   QSS+RTY +TFF F  +QRVS    ++P  G NL  VSP LR R*AEAS AC PRRNQ+T  * C   F  C**  *EV+  QA S*D L
Subject  14866  NQKTSPVSKKNFTTQSALLYSLTADS*SYRTVLERMTV*CAPSKSFITSSRLQPVTSPRCDTRKYPHINNFGRLTSSSDLTTSNVVF*FVRNSTSASGF*AQISIT*LLSYLIGANY*RAYLLLRPQSSKRTYLQTFFYFVVIQRVSGKHLKSPQLGTNLLLVSPILRPR*AEASYACKPRRNQHTPP*TCGRKFAAC**IY*EVRTLQALS*DHL  15513

Range 7: 15589 to 16122 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
245.3 bits(529) 0.0 120/178(67%) 0/178(0%) Minus/Minus
Query      834  VTYKRPFLTTVYLILS*IENASLSLRPPEWAHP*V*HIFA**TPLTL*VHLYKDDSPPSRAREVERFLNSTRWYRSGVFQRSRVDITQYQRTIDTRLLRNALLVLSSKIL*YIPSYPTHHCLCFATYRLTSPECLQLHKEILSPSS*RFLSSQKESITDSVSISTCFKQCSMVPQCDP  1367
                VTY+RPFL  VYL LS*IE A L L+PP   H * * I A**TPL L VHL K++SPPSR  E ER  +  +  RS VF+R+ V  T  QRTI T LLR+A L L+S+ L*   SYPT HCLCFAT++L   ECLQLHKEILSPSS*RFLSSQK+SITDSVSISTCFKQ SMVPQCDP
Subject  15589  VTYRRPFLKIVYLKLS*IECAFLFLQPPAPPHL*A*RISA**TPLVLWVHLCKNESPPSRV*EGERVSDLIQRCRSSVFRRNHVGTTLCQRTIGTMLLRSANLALASRTL*CTLSYPTLHCLCFATFQLILLECLQLHKEILSPSS*RFLSSQKDSITDSVSISTCFKQYSMVPQCDP  16122

Range 8: 14773 to 14820 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.9 bits(48) 0.0 11/16(69%) 0/16(0%) Minus/Minus
Query       18  HQNRPFEL*AM*FSLR  65
                +QN+P EL AM FSLR
Subject  14773  YQNQPSELWAMWFSLR  14820

Range 9: 15310 to 16146 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
346.1 bits(749) 0.0 174/279(62%) 0/279(0%) Plus/Plus
Query      555  NMRIFARILPRRRDGMLSRRHSKRFRGCSSHCNSFDNDTVRLRIHS*GV**LPLCGKILSRDG*RLLVFSPKRQ*RKSGASFAHLLRS*QFLLWIALRYHGALFEAGTDRN*VCNRFFL*RKKSLR*R**YLLMKLKTFWRGQPICCET*TVVCWI*RNVLKYFRR*HEKCIAQKPRINGALILGYINATALKNA*SIPSSRI*ESLNLSCARRWRIIFVKMNLES*WRSLRENMLNLRVCPFGRP*R*RCVLYLRQY*INCR*KWPFICHPR*PNTPN  1391
                NMR+F R+  R  D + SRR +K F  C+SH +  +N  V LR+ S* V *  L G+IL R+  R LVFSPK   RKSGA+ AHLLRS*QFLLWIALRYHG LFEAGTDRN*VCNR FL*RKKSLR* **YLLMKLKTF + Q  CCET*TV  WI  + LK  RR* E C AQK R NGAL  G  N  A KNA*S P ++I*+SL LS ARRWR+IF KMN ++*WRS R N L+ +V   GR *+*+C LYLRQ+*IN  *KWP ICH     T N
Subject  15310  NMRVFTRVASRGCDWL*SRRRNKGF*RCTSHRHPLENGPV*LRVRS*RVQ*R*LRGEILFRNRRRFLVFSPK*HQRKSGATLAHLLRS*QFLLWIALRYHGVLFEAGTDRN*VCNRIFL*RKKSLR*G**YLLMKLKTF*QDQLKCCET*TVERWIRESALKRSRR*REICTAQKHRTNGALTQGCANVIAPKNA*STPLNQI*DSLTLSYARRWRLIFAKMNPKN*WRSSRGNTLSSQVWRRGRL*K*KCALYLRQF*INYL*KWPSICHLERGKTQN  16146

Range 10: 14920 to 15282 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
149.5 bits(320) 0.0 71/121(59%) 0/121(0%) Plus/Plus
Query      165  TNFELWVALSQKRILISAWRTSTRCLSSTQPQSWGYRLKILTLQRIFWEHVRNSLNCSKAEKCSRVCTL*RLKVG**VHPLAIYANWVGGKLCDGNLYSEFRIASTAPHNSKHNTASHQI*  527
                T+ EL  A  ++R+LISAW TS RCLSST+PQ+WGY+ KI T  R F    RNSLN +K EKC +VCTL*RL+  **+ PL I AN VG KLCDGNL SE    S   H SKHN  S Q+*
Subject  14920  TSCELSAARLRRRMLISAWLTSIRCLSSTRPQNWGYQQKIRT*LRTF*VLARNSLNYNKVEKCLQVCTL*RLRAE**IRPLVICAN*VGEKLCDGNLRSES*GTSAITHKSKHNITSRQV*  15282

Grapevine leafroll associated virus 2 isolate RGp major coat protein, 19 kDa protein, and 24 kDa protein genes, complete cds

Sequence ID: KP704580.1 Length: 1749 Number of Matches: 10

Range 1: 154 to 1542 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
770.9 bits(1676) 0.0 357/463(77%) 0/463(0%) Plus/Plus
Query        2  MMLYAIAARTTSPKVQRGDSDVLFSYGSGDRTITVTEGDLKKVLDGFAPLTRFTNKLRTMGRTFTEAYIDFCVAYKHKMPQLNAAAELGIPAEDSYLAADFLGACPKLSELQQSRKMFASMYALKTEGGVVSTPVSNLRQLGRREVM*WKSVLRIPNR*YCSAQLKTQYC*SSNLMARLIYLRY*YADICAYPATET*RDAVAKT**KISRVLITL*FVRQRYSTITNPQLRSIMTPIVW*NSF*RRVTSSGFFSEATVEEERRVICAPSSKLTISSLDRIAVPWSIV*SRY**KLSL*SILFXXXXXXXXXXXXSPYEAEDILARSTDMLRNIDSGVLDMKECIKVFSTITREVHCAKASYQWCVDTGLYQRDCAEKRLIDTIESNLRIAQPLVREKVANHLCKDEPRELVAFITRKYVKLTGVPIREAVKIEMRSLSKTVLNKLSLEMAFYMSPPLTKHTQ  1390
                ++LYA+AARTTSPKVQR DSD++F    GD+T+ VTEGDLKKVL+G APL RFTNKLRT GRTFTEAY+DFCVAYKHKMPQLNAAAELGIPAEDSYLAADFLGACPKLSELQQSRKMFASMYALKTEGGVV+TPVSNLRQLGRREVM*WK  LRI   *   AQ+KTQ+ *SS+LM +LI    *YA I A      *   +AKT**+I +V IT    R+RY  IT+PQL+S +T I W*NSF*++ T  GFFS+ T +EERR  CA SSKLTISSLDRIAVPWSIV*SRY**KLSL*S LFVKKEIVKM+VIVSPYEAE IL RST+MLRNIDSG LD +ECIK FST+TR++HCAKASYQWCVDTGL QRDCAEKRLIDT+ESNLR+AQPL+REKVA H CKDEP+ELVAFITRKYVKLTGV  REAVKIEMR+LSKTVLNKLSLEMAFYMSP   K+ +
Subject    154  LLLYALAARTTSPKVQRADSDIIFQNTYGDKTVVVTEGDLKKVLEGCAPLNRFTNKLRTFGRTFTEAYVDFCVAYKHKMPQLNAAAELGIPAEDSYLAADFLGACPKLSELQQSRKMFASMYALKTEGGVVNTPVSNLRQLGRREVM*WKFALRILRH*CYYAQIKTQHY*SSSLMMKLICRNC*YAGIYACRIAGM*LVVIAKT**RILKVHITPSSARERYGMITSPQLKSTITLIAW*NSF*KQETFFGFFSKVTSKEERRDTCAXSSKLTISSLDRIAVPWSIV*SRY**KLSL*SNLFVKKEIVKMRVIVSPYEAEXILTRSTEMLRNIDSGALDTRECIKAFSTLTRDLHCAKASYQWCVDTGLCQRDCAEKRLIDTVESNLRLAQPLIREKVATHFCKDEPKELVAFITRKYVKLTGVAAREAVKIEMRTLSKTVLNKLSLEMAFYMSPRAWKNAE  1542

Range 2: 165 to 1520 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
707.6 bits(1538) 0.0 339/452(75%) 0/452(0%) Minus/Minus
Query       13  GDI*KAISNDSLFNTVLDRERISIFTASRMGTPVSLTYFRVMNATNSLGSSLQR*FATFSRTRG*AILKFDSMVSIRRFSAQSR*YNPVSTHH*YEAFAQCTSRVIVENTLIHSFISNTPLSMFRNISVDLARMSSAS*GDXXXXXXXXXXXTKRIDYRLSFYQYLLQTMLHGTAMRSKEEIVSFEEGAQMTRRSSSTVASEKKPEDVTRL*KEFYHTMGVIILLSCGFVIVLYRCRTNYSVMSTLEIFYYVFATASRHVSVAGYAQISAY*YLR*INLAIRFDD*QYCVLSCAEQY*RFGILSTDFHHITSLLPNWRRLLTGVLTTPPSVFRAYILANIFLLCCSSESFGHAPRKSAAR*ESSAGIPNSAAALS*GILCLYATQKSIYASVKVRPIVRSLLVNLVRGANPSSTFLRSPSVTVIVLSPEPYENNTSESPL*TLGDVVLAAMA  1368
                GDI*KAIS DSLF TVLDR RISIFTASR  TPVSLTYFRVMNAT+SLGSSLQ+* ATFSR RG*A L+FDS VSI+RFSAQSR +NPVSTHH Y+AFAQC SRV VEN L+HS +SN PLSMFRNISVDL RM SAS*GDTIT ILTISFFTKR DYRLSFYQYLLQT+LHGTAMRSKEEIVSFEE AQ++RRSS  V  EKKP++V+  *KEF+H + VI+L +CG VI+ YR R +  VM T +I YYVFA  + H+    +A I AY*  R IN  IR DD*  CVL CA  +*   ILS +FHHITSLLPNWR+LLTGV TTPPSVF+AYILANIFLLCC+SESFG AP+KSAAR ESSAGIPNSAAALS*GILCL ATQKS YASV VRP VRSLLVNL+RGA+PSSTFLRSPSVT  VLSP  +    SES L*TLGDVVLAA A
Subject    165  GDI*KAISKDSLFKTVLDRVRISIFTASRAATPVSLTYFRVMNATSSLGSSLQK*VATFSRMRG*ASLRFDSTVSIKRFSAQSRWHNPVSTHHWYDAFAQCKSRVSVENALMHSLVSNAPLSMFRNISVDLVRMXSAS*GDTITLILTISFFTKRFDYRLSFYQYLLQTILHGTAMRSKEEIVSFEEXAQVSRRSSFDVTLEKKPKNVSCF*KEFHHAISVIVLFNCGLVIIPYRSRADDGVMCTFKILYYVFAITTSHIPAMRHA*IPAY*QFRQINFIIRLDD**CCVLICA**H*CLRILSANFHHITSLLPNWRKLLTGVFTTPPSVFKAYILANIFLLCCNSESFGQAPKKSAARYESSAGIPNSAAALS*GILCL*ATQKSTYASVNVRPKVRSLLVNLLRGAHPSSTFLRSPSVTTTVLSP*VF*KIISESAL*TLGDVVLAARA  1520

Range 3: 264 to 1520 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
637.5 bits(1385) 0.0 288/419(69%) 0/419(0%) Plus/Plus
Query      112  RGS*EGA*RICTSY*VH*QTSNYGSHFHRSVY*FLRGVQAQDASAQRSRRVGDTG*RFLPCSGFSGSMSETL*TAAKQKNVREYVRSED*RWGSKYTR*QSTPIG*EGSYVMEICTQNSESLVLLRTTQNTILLVIKSDGKVNLPKILICGYLRVSCHGDVTGCCREDIVKDFEGAHHTVIRSTTIQYDYESTAKEYNDSHCVVKFFLETGDVFWFFLRSDSRGRAARHLRTFFEANNFFFGSHCGTMEHCLKQVLIETESVIDSFCEERNR*DEGDSISL*S*RHSGEVNRYVAKHRQWCVGYEGMY*SIFDDNTRSALRKSLVSMVR*YWVISTRLR*KTPDRYHRVEFKNRSTSRAREGGESSL*R*T*RVSGVHYAKIC*TYGCAHSGGRKDRDAFSI*DSIK*TVVRNGLLYVT  1368
                R S E A*R+ TS *+H*Q +N+  H +  V *FLRG+QA DASAQR RR+GDT  RF+P  G    + ETL*   K KNV +YVR ED*   SKY R*   PI *E SYVMEIC QN E+LVLLRT QNT LLV+KSD +VNLPK+LICGYLRVS  GDVTGC RED++KDFEGAHHTVIRS T++YDYES  KEYN++ CVVKFFLETGDVFWFFL+SD +GRAARHLR FFEANNFFFGSHCGTME+CLKQVLIETESVI+SFCEERNR*DEGDSISL*S* HS ++N  VAKHRQW VGYE ++*S+ D N R ALRKS+V MVR*+ V+ T LR KT DR+  ++ + RSTS  REGG+S L R*T R SGVH+A+I * + C  +GG K+R+A SI*DS K*T+ RNGLLYVT
Subject    264  R*SQESA*RVRTS**IH*QAANFRPHVYGGVC*FLRGLQA*DASAQRGRRIGDTSRRFVPSCGLFRCLPETL*ITTK*KNVCKYVRFED*GRSSKYAR**FAPIR*ERSYVMEICAQNPEALVLLRTNQNTTLLVVKSDDEVNLPKLLICGYLRVSHRGDVTGCNREDVIKDFEGAHHTVIRSRTVRYDYESAVKEYNNADCVVKFFLETGDVFWFFLQSDIKGRAARHLRXFFEANNFFFGSHCGTMEYCLKQVLIETESVIESFCEERNR*DEGDSISL*S*XHSNKIN*NVAKHRQWSVGYERVH*SVLDANARFALRKSIVPMVR*HRVVPT*LRRKTLDRHR*IKSETRSTSHTREGGDSFLQR*TQRTSGVHHAEIR*AHRCGGAGGCKNRNAHSI*DSFK*TIFRNGLLYVT  1520

Range 4: 158 to 217 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.6 bits(56) 0.0 12/20(60%) 0/20(0%) Plus/Plus
Query        6  CYMPSQRELHRLKFKGAILM  65
                C   SQRE HR KF+G IL+
Subject    158  CSTLSQREPHRPKFRGLILI  217

Range 5: 163 to 1536 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
558.7 bits(1213) 0.0 272/458(59%) 0/458(0%) Minus/Minus
Query       11  VFG*RG*HIKGHF*RQFI*YCLR*RTHLYLYGLPNGHTRKFNIFSRNERH*LSRFIFTKMIRHLLAHERLSDS*IRLDGIDQAFFSAVALI*PSINAPLIRGFCAMHFSCYRRKYFNTFLHIQHTTVYVSQHIG*PRQNVFSFIRRYYHLHLNDFFLHKKNRLQTQFLSVPASNNAPWYRNAIQXXXXXXXXXCANDAPLFLYCRFGEKTRRRHPSLERILPHNGSHYTP*LWIRNRTVSLSNELQCDEHPRNLLLCLRDSIPSRLRGRIRANIRILVS*VN*PCHQI**LAVLCFELCGAVLAIRNSEYRFPSHNFPPTQLA*IANGCTYYPTFSLQSVHTREHFSALLQFREFRTCSQKIRCKVRIFSRYPQLCGCVELRHLVLVRHAEINIRFCESATHSSKFVSEPSKRCKSVKHLLKIPFSNSNSPIPRTVRE*HIRIAPLNFRRCSSRCDGI  1384
                VF    *HI+GHF*R FI* CLR*  H Y Y LP  HT + N+F R+ERH*   FIF KM RHLLA+ERLS+S I  +G+DQAFF A+ L  P +NAPL+R FCA+  S  RR+ FN    IQ +TVYVSQH  *   N FSFIRRYYH HLNDFFLHKK RLQTQFLSVPASNN PWYRNAIQRRNC*LRR CA+ APLFL C FGEKT++R   L+RI P N  + T *L  RN TV  S+  +CD H +N LL LRD   S  R   R N RIL    +*  HQ * L +LCF+LC   L  ++SE +FPSHNF PT LA I NG  YY   SLQSVHT +HFS LL FREFR  + K+R  VRIF  YPQ CG VELRHL+LV HAEINIR  + A  SS+ VSE  KRC   KH L+I F + NS +  +V + +IRI+PLNF RC SRC+ +
Subject    163  VFPRSR*HIEGHF*R*FI*NCLR*SAHFYFYSLPRRHTCELNVFPRDERH*FFGFIFAKMSRHLLAYERLSESQI*FNGVDQAFFGAITLAQPCVNAPLVRCFCAVQISR*RRERFNALSRIQRSTVYVSQHFS*SC*NXFSFIRRYYHPHLNDFFLHKKIRLQTQFLSVPASNNTPWYRNAIQRRNC*LRRXCASVAPLFL*CHFGEKTKKRLLFLKRISPRNQRYCTL*LRTRNHTVPFSSG*RCDVHLQNPLLRLRDYNQSHPRDATRVNTRILTISAD*LHHQT*RLVMLCFDLCVIALVPQDSERKFPSHNFSPT*LAQITNGRIYYSALSLQSVHTCKHFSTLL*FREFRAST*KVRS*VRIFCWYPQFCGRVELRHLMLVSHAEINIRLRKRAAESSQLVSESIKRCAPFKHFLEITFCHDNSLVTVSVLKDYIRISPLNFGRCGSRCESV  1536

Range 6: 263 to 910 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
263.6 bits(569) 0.0 138/216(64%) 0/216(0%) Minus/Minus
Query      111  NQKTSPVSRKNFTTQWESLYSLAVDS*SYCIVVERITV**APSKSFTMSSRQHPVTSPWQDTRKYPHISILGKLTLPSDLMTSSIVF*VVRSSTSDSEF*VQISIT*LPSYPIGVDC*RVYLLPHLQSSERTYSRTFFCFAAVQRVSDMLPENPLQGKNLQPVSPTLRLR*AEASCACTPRRNQYTLL*KCDP*FEVC**T**EVQIRQAPS*DPL  758
                NQKTSPVS+KNFTTQ   LYSL  DS*SY  V+ER+TV* APSKSF  SSR  PVTSP  DTRKYPHI+  G+LT  SDL TS++VF* VR+STS S F* QISIT*L SY IG + *R YLL   QSS+RTY +TFF F  +QRVS    ++P  G NL  VSP LR R*AEAS AC PRRNQ+T  * C   F  C**  *EV+  QA S*D L
Subject    263  NQKTSPVSKKNFTTQSALLYSLTADS*SYRTVLERMTV*CAPSKSFITSSRLQPVTSPRCDTRKYPHINNFGRLTSSSDLTTSNVVF*FVRNSTSASGF*AQISIT*LLSYLIGANY*RAYLLLRPQSSKRTYLQTFFYFVVIQRVSGKHLKSPQLGTNLLLVSPILRPR*AEASYACKPRRNQHTPP*TCGRKFAAC**IY*EVRTLQALS*DHL  910

Range 7: 986 to 1519 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
243.9 bits(526) 0.0 120/178(67%) 0/178(0%) Minus/Minus
Query      834  VTYKRPFLTTVYLILS*IENASLSLRPPEWAHP*V*HIFA**TPLTL*VHLYKDDSPPSRAREVERFLNSTRWYRSGVFQRSRVDITQYQRTIDTRLLRNALLVLSSKIL*YIPSYPTHHCLCFATYRLTSPECLQLHKEILSPSS*RFLSSQKESITDSVSISTCFKQCSMVPQCDP  1367
                VTY+RPFL  VYL LS*IE A L L+PP   H * * I A**TPL L VHL K++SPPSR  EVER  +  +  RS VF+R+ V  T  QRTI T LLR+A L L+S+ L*   SYPT HCLCFAT++L   E LQLHKEILSPSS*RFLSSQK+SITDSVSISTCFKQ SMVPQCDP
Subject    986  VTYRRPFLKIVYLKLS*IECAFLFLQPPAPPHL*A*RISA**TPLVLWVHLCKNESPPSRV*EVERVSDLIQRCRSSVFRRNHVGTTLCQRTIGTMLLRSANLALASRTL*CTLSYPTLHCLCFATFQLILLEXLQLHKEILSPSS*RFLSSQKDSITDSVSISTCFKQYSMVPQCDP  1519

Range 8: 170 to 217 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.9 bits(48) 0.0 11/16(69%) 0/16(0%) Minus/Minus
Query       18  HQNRPFEL*AM*FSLR  65
                +QN+P EL AM FSLR
Subject    170  YQNQPSELWAMWFSLR  217

Range 9: 707 to 1543 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
344.7 bits(746) 0.0 174/279(62%) 0/279(0%) Plus/Plus
Query      555  NMRIFARILPRRRDGMLSRRHSKRFRGCSSHCNSFDNDTVRLRIHS*GV**LPLCGKILSRDG*RLLVFSPKRQ*RKSGASFAHLLRS*QFLLWIALRYHGALFEAGTDRN*VCNRFFL*RKKSLR*R**YLLMKLKTFWRGQPICCET*TVVCWI*RNVLKYFRR*HEKCIAQKPRINGALILGYINATALKNA*SIPSSRI*ESLNLSCARRWRIIFVKMNLES*WRSLRENMLNLRVCPFGRP*R*RCVLYLRQY*INCR*KWPFICHPR*PNTPN  1391
                NMR+F R+  R  D + SRR +K F  C+SH +  +N TV LR+ S* V *  L G+IL R+  R LVFSPK   RKSGA+ A LLRS*QFLLWIALRYHG LFEAGTDRN*VCNR FL*RKKSLR* **YLLMKLK F + Q  CCET*TV  WI  + LK  RR* E C AQK R NGAL  G  N  A KNA*S P ++I*+SLNLS ARRWR+IF KMN ++*WRS R N L+ +V   GR *+*+C LYLRQ+*IN  *KWP ICH     T N
Subject    707  NMRVFTRVASRGCDWL*SRRRNKGF*RCTSHRHPLENGTV*LRVRS*RVQ*R*LRGEILFRNRRRFLVFSPK*HQRKSGATLAXLLRS*QFLLWIALRYHGVLFEAGTDRN*VCNRIFL*RKKSLR*G**YLLMKLKXF*QDQLKCCET*TVERWIRESALKRSRR*REICTAQKHRTNGALTQGCANVIAPKNA*STPLNQI*DSLNLSYARRWRLIFAKMNPKN*WRSSRGNTLSSQVWRRGRL*K*KCALYLRQF*INYL*KWPSICHLERGKTQN  1543

Range 10: 317 to 679 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
149.5 bits(320) 0.0 71/121(59%) 0/121(0%) Plus/Plus
Query      165  TNFELWVALSQKRILISAWRTSTRCLSSTQPQSWGYRLKILTLQRIFWEHVRNSLNCSKAEKCSRVCTL*RLKVG**VHPLAIYANWVGGKLCDGNLYSEFRIASTAPHNSKHNTASHQI*  527
                T+ EL  A  ++R+LISAW TS RCLSST+PQ+WGY+ KI T  R F    RNSLN +K EKC +VCTL*RL+  **+ PL I AN VG KLCDGNL SE    S   H SKHN  S Q+*
Subject    317  TSCELSAARLRRRMLISAWLTSIRCLSSTRPQNWGYQQKIRT*LRTF*VLARNSLNYNKVEKCLQVCTL*RLRAE**IRPLVICAN*VGEKLCDGNLRSES*GTSAITHKSKHNITSRQV*  679

Nucleotide Sequence (810 letters)

Query ID:ds2016-58_48
Query definition:No definition line
Query length:589
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 10 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
81
162
243
324
405
486
567
648
729
810

Descriptions

Alignments

Grapevine leafroll associated virus 2, complete genome

Sequence ID: DQ286725.2 Length: 16535 Number of Matches: 7

Range 1: 12252 to 13052 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
642.1 bits(1395) 0.0 263/267(99%) 0/267(0%) Plus/Plus
Query        9  SEVTRLALYRWMKMSNHSWESLFKKFYGEADWKKYLSKSIAAHSADVKNLPDTQLYGGRIVRKSDFESAAPRSFEQELGLFILSERDVGWGKMCGMTVEEAAYQLTNPNAFPIVAEKCDPDVKTEGQKYSMEDVENFMRLSNLDTSDRILVEQCWSLSNSCGVLINPDDKERFVSLTFKNNELINDSSNANIDCRVSDYLVYAMSLFNQRAQKSQAGNISLYEKYCTHIRKYLESTDLFFTSPDRIPLLTGILYDFCKEYSVFYSTY  809
                S+VTRLALYRWMKMSNHSWESLFKKFYGEADWKKYLSKSIAAHSADVKNLPDTQLYGGRIV+KSDFESAAPRSFEQELGLFILSERDVGWGKMCGMTVEEAAYQLTNPNAFPIVAEKCDPDVKTEGQKYSMEDVENFMRLSNLDTSDR LVEQCWSLSNSCGVLINPDDKERFVSLTFKNNELINDSSNANIDCRVSDYLVYAMSLFNQRAQKSQAGNISLYEKYC HIRKYLESTDLFFTSPDRIPLLTGILYDFCKEYSVFYSTY
Subject  12252  SKVTRLALYRWMKMSNHSWESLFKKFYGEADWKKYLSKSIAAHSADVKNLPDTQLYGGRIVKKSDFESAAPRSFEQELGLFILSERDVGWGKMCGMTVEEAAYQLTNPNAFPIVAEKCDPDVKTEGQKYSMEDVENFMRLSNLDTSDRTLVEQCWSLSNSCGVLINPDDKERFVSLTFKNNELINDSSNANIDCRVSDYLVYAMSLFNQRAQKSQAGNISLYEKYCAHIRKYLESTDLFFTSPDRIPLLTGILYDFCKEYSVFYSTY  13052

Range 2: 12250 to 13053 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
616.0 bits(1338) 0.0 264/268(99%) 0/268(0%) Minus/Minus
Query        7  CMWSRRHCTLYKSRRECQ*VRVSCQAT*RINRYFPSTS*YEYNTSHKAKYYPPVTSVLFG*IGTWRKLDNRLRDSLYLRYSSR*LTRYF*T*ETRNVPYRRD*SEPHTN*IKTNIALPKFYHSYLS*KDA*NSQHLPSSIFGLQSLHPDHIFQLR*EKHWGS*VGTLPLPQSCHTSCPTPHLARLV*IVPIPARMISELQTQNRTSLQFYLRTIEYLVDFSRPRSVRQYF*IGISSNLPPRKIF*TDFPMSGSTSSSNGRELAE*LLN  810
                CMWSRRHCT YKSR+ECQ*VRVSCQAT*RINRYFPSTS*YE+NTSHKAKYYPPVTSVLFG*IGTWRKLDNRLRDSLYLRYSSR*LTRYF*T*ETRNVPYRRD*SEPHTN*IKTNIALPKFYHSYLS*KDA*NSQHLPSSIFGLQSLHPDHI QLR*EKHWGS*VGTLPLPQSCHTSCPTPHLARLV*IVPIPARMISELQTQNRTSLQFYLRTIEYLVDFSRPRSVRQYF*IGISSNLPPRKIF*TDFPMSGSTSSSNGRELAE*LLN
Subject  12250  CMWSRRHCTPYKSRKECQ*VRVSCQAT*RINRYFPSTS*YEHNTSHKAKYYPPVTSVLFG*IGTWRKLDNRLRDSLYLRYSSR*LTRYF*T*ETRNVPYRRD*SEPHTN*IKTNIALPKFYHSYLS*KDA*NSQHLPSSIFGLQSLHPDHISQLR*EKHWGS*VGTLPLPQSCHTSCPTPHLARLV*IVPIPARMISELQTQNRTSLQFYLRTIEYLVDFSRPRSVRQYF*IGISSNLPPRKIF*TDFPMSGSTSSSNGRELAE*LLN  13053

Range 3: 12251 to 13051 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
606.4 bits(1317) 0.0 263/267(99%) 0/267(0%) Minus/Minus
Query        8  YVE*KTLYSLQKS*RMPVSKGILSGDVKNKSVLSKYFLI*VQYFS*SEILPACDFCALWLNRDMA*TR*SLTRQSIFALLESLINSLFLNVRDTKRSLSSGLIRTPHELDKDQHCSTKILSLVSKLERRMKFSTSSIEYFWPSVFTSGSHFSATIGKALGFVSWYAASSTVMPHILPHPTSRSLSMNSPNSCSNDLGAADSKSDFLTILPPYN*VSGRFFTSAECAAILLDRYFFQSASP*NFLNRLSHEWFDIFIQR*RASRVTSE  808
                YVE*KTLYSLQKS*RMPVSKGILSGDVKNKSVLSKYFLI* QYFS*SEILPACDFCALWLNRDMA*TR*SLTRQSIFALLESLINSLFLNVRDTKRSLSSGLIRTPHELDKDQHCSTK+LSLVSKLERRMKFSTSSIEYFWPSVFTSGSHFSATIGKALGFVSWYAASSTVMPHILPHPTSRSLSMNSPNSCSNDLGAADSKSDF TILPPYN*VSGRFFTSAECAAILLDRYFFQSASP*NFLNRLSHEWFDIFIQR*RASRVT E
Subject  12251  YVE*KTLYSLQKS*RMPVSKGILSGDVKNKSVLSKYFLI*AQYFS*SEILPACDFCALWLNRDMA*TR*SLTRQSIFALLESLINSLFLNVRDTKRSLSSGLIRTPHELDKDQHCSTKVLSLVSKLERRMKFSTSSIEYFWPSVFTSGSHFSATIGKALGFVSWYAASSTVMPHILPHPTSRSLSMNSPNSCSNDLGAADSKSDFFTILPPYN*VSGRFFTSAECAAILLDRYFFQSASP*NFLNRLSHEWFDIFIQR*RASRVTFE  13051

Range 4: 12249 to 13052 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
595.4 bits(1293) 0.0 263/268(98%) 0/268(0%) Minus/Minus
Query        6  VCGVEDTVLFTKVVENASK*GYPVRRREE*IGTFQVLPDMSTILLIKRNITRL*LLCSLVK*GHGVN*IIAYATVYICVTRVVD*LVIFERKRHETFLIVGINQNPTRIR*RPTLLYQNSITRI*VRKTHEILNIFHRVFLAFSLYIRITFFSYDRKSIGVRELVRCLFHSHATHLAPPHISLA*YE*SQFLLE*SRSCRLKIGLPYNSTSVQLSIW*IFHVRGVCGNTFR*VFLPICLPVKFFEQTFP*VVRHLHPTVES*PSNF*T  809
                VCGVEDTVL TKVV+NASK*GYPVRRREE*IGTFQVLPDMSTILLIKRNITRL*LLCSLVK*GHGVN*IIAYATVYICVTRVVD*LVIFERKRHETFLIVGINQNPTRIR*RPTLLYQ+SITRI*VRKTHEILNIFHRVFLAFSLYIRITF SYDRKSIGVRELVRCLFHSHATHLAPPHISLA*YE*SQFLLE*SRSCRLKIGL YNSTSVQLSIW*IFHVRGVCGNTFR*VFLPICLPVKFFEQTFP*VVRHLHPTVES*PSNF*T
Subject  12249  VCGVEDTVLLTKVVKNASK*GYPVRRREE*IGTFQVLPDMSTILLIKRNITRL*LLCSLVK*GHGVN*IIAYATVYICVTRVVD*LVIFERKRHETFLIVGINQNPTRIR*RPTLLYQSSITRI*VRKTHEILNIFHRVFLAFSLYIRITFLSYDRKSIGVRELVRCLFHSHATHLAPPHISLA*YE*SQFLLE*SRSCRLKIGLLYNSTSVQLSIW*IFHVRGVCGNTFR*VFLPICLPVKFFEQTFP*VVRHLHPTVES*PSNF*T  13052

Range 5: 12250 to 13053 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
572.9 bits(1244) 0.0 263/268(98%) 0/268(0%) Plus/Plus
Query        7  VQKLLG*LSTVG*RCRTTHGKVCSKNFTGRQIGRNTYLKVLPHTPRT*KIYQILNCTEVEL*GSPILSLQLRDHSSRNWDYSY*ASEMWGGARCVA*LWKRQRTNSRTPMLFLS*LKNVIRM*RLKAKNTRWKMLRISCVFLT*IRVIEFW*SNVGLYLIRVGF*LIPTIRNVSCLLRSKITS*STTRVTQI*TVA*AII*FTPCPYLTKEHRSHRRVIFRFMRSIVLISGSTWKVPIYSSRRLTGYPYLLAXXXXXXXXXXXXXPHT  810
                VQKLLG*LSTVG*RCRTTHGKVCSKNFTGRQIGRNTYLKVLPHTPRT*KIYQILNCTEVEL* SPILSLQLRDHSSRNWDYSY*ASEMWGGARCVA*LWKRQRTNSRTPMLFLS*L+NVIRM*RLKAKNTRWKMLRISCVFLT*IRVIE W*SNVGLYLIRVGF*LIPTIRNVSCLLRSKITS*STTRVTQI*TVA*AII*FTPCPYLTKEHRSHRRVIFRFMRSIVLISGSTWKVPIYSSRRLTGYPYLLAF TTFV+STVSSTPHT
Subject  12250  VQKLLG*LSTVG*RCRTTHGKVCSKNFTGRQIGRNTYLKVLPHTPRT*KIYQILNCTEVEL*RSPILSLQLRDHSSRNWDYSY*ASEMWGGARCVA*LWKRQRTNSRTPMLFLS*LRNVIRM*RLKAKNTRWKMLRISCVFLT*IRVIELW*SNVGLYLIRVGF*LIPTIRNVSCLLRSKITS*STTRVTQI*TVA*AII*FTPCPYLTKEHRSHRRVIFRFMRSIVLISGSTWKVPIYSSRRLTGYPYLLAFFTTFVRSTVSSTPHT  13053

Range 6: 12251 to 12805 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
425.4 bits(922) 0.0 183/185(99%) 0/185(0%) Plus/Plus
Query        8  FRSYSASSLPLDEDVEPLMGKSVQKILRGGRLEEIPI*KYCRTLRGREKSTRYSIVRR*NCKEVRF*VCSSEIIRAGIGTIHTKRARCGVGQDVWHDCGRGSVPTHEPQCFSYRS*KM*SGCKD*RPKILDGRC*EFHASF*LRYE**NFGRAMLVFI*FVWGSD*SRR*GTFRVSYVQK*RVNQ  562
                F+SYSASSLPLDEDVEPLMGKSVQKILRGGRLEEIPI*KYCRTLRGREKSTRYSIVRR*NCKEVRF*VCSSEIIRAGIGTIHTKRARCGVGQDVWHDCGRGSVPTHEPQCFSYRS*+M*SGCKD*RPKILDGRC*EFHASF*LRYE**NFGRAMLVFI*FVWGSD*SRR*GTFRVSYVQK*RVNQ
Subject  12251  FKSYSASSLPLDEDVEPLMGKSVQKILRGGRLEEIPI*KYCRTLRGREKSTRYSIVRR*NCKEVRF*VCSSEIIRAGIGTIHTKRARCGVGQDVWHDCGRGSVPTHEPQCFSYRS*EM*SGCKD*RPKILDGRC*EFHASF*LRYE**NFGRAMLVFI*FVWGSD*SRR*GTFRVSYVQK*RVNQ  12805

Range 7: 12860 to 13009 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
114.2 bits(243) 0.0 49/50(98%) 0/50(0%) Plus/Plus
Query      617  HVPI*PKSTEVTGG*YFAL*EVLYSYQEVLGKYRFILHVA*QDTLTYWHS  766
                HVPI*PKSTEVTGG*YFAL*EVL SYQEVLGKYRFILHVA*QDTLTYWHS
Subject  12860  HVPI*PKSTEVTGG*YFAL*EVLCSYQEVLGKYRFILHVA*QDTLTYWHS  13009

Grapevine rootstock stem lesion associated virus, complete genome

Sequence ID: NC_004724.1 Length: 16527 Number of Matches: 8

Range 1: 12248 to 13039 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
549.1 bits(1192) 0.0 218/264(83%) 0/264(0%) Plus/Plus
Query       18  TRLALYRWMKMSNHSWESLFKKFYGEADWKKYLSKSIAAHSADVKNLPDTQLYGGRIVRKSDFESAAPRSFEQELGLFILSERDVGWGKMCGMTVEEAAYQLTNPNAFPIVAEKCDPDVKTEGQKYSMEDVENFMRLSNLDTSDRILVEQCWSLSNSCGVLINPDDKERFVSLTFKNNELINDSSNANIDCRVSDYLVYAMSLFNQRAQKSQAGNISLYEKYCTHIRKYLESTDLFFTSPDRIPLLTGILYDFCKEYSVFYSTY  809
                T L LY   KMSNHSW SLFKK+YGEADW+KYLSKSI AH+A++K LPD QLYGGR V+KS+FESA PRSFEQELGL +LSERDVGW KMCG+TVEEA YQ+TNP A+PI AEKCDPDVKTEGQKY+MEDV NFMR SNLD +D+IL EQCWSLSNSCGVLINPDDKERFV+LTFKNNEL+NDSSNANIDCRV DYLVYAMSLFN R+QKSQAGNISLYEKYC +IR YLE+TDL+FTSPDRIPLLTGILYDFCKEY++FYSTY
Subject  12248  TTLVLYHQTKMSNHSWGSLFKKYYGEADWRKYLSKSIVAHTANIKTLPDVQLYGGRTVKKSEFESATPRSFEQELGLLMLSERDVGWCKMCGITVEEAMYQITNPEAYPITAEKCDPDVKTEGQKYTMEDVMNFMRRSNLDINDKILAEQCWSLSNSCGVLINPDDKERFVALTFKNNELVNDSSNANIDCRVGDYLVYAMSLFNCRSQKSQAGNISLYEKYCAYIRTYLENTDLYFTSPDRIPLLTGILYDFCKEYNIFYSTY  13039

Range 2: 12247 to 13038 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
446.0 bits(967) 0.0 201/264(76%) 0/264(0%) Minus/Minus
Query       17  YVE*KTLYSLQKS*RMPVSKGILSGDVKNKSVLSKYFLI*VQYFS*SEILPACDFCALWLNRDMA*TR*SLTRQSIFALLESLINSLFLNVRDTKRSLSSGLIRTPHELDKDQHCSTKILSLVSKLERRMKFSTSSIEYFWPSVFTSGSHFSATIGKALGFVSWYAASSTVMPHILPHPTSRSLSMNSPNSCSNDLGAADSKSDFLTILPPYN*VSGRFFTSAECAAILLDRYFFQSASP*NFLNRLSHEWFDIFIQR*RASRV  808
                YVE*K LYSLQKS*RMPVS GILSG+VK KSV SK  L+* QYFS*SE+LPACDF  L LNRD+A*T+*S TRQS+FALLESL NSLFL VR T RSLSSGLI+TPHELD+DQHCS KILS +S+LERRMKF TSSI YF PSVFTSGSHFSA IG A GFV WY ASSTV+PHIL  PTSRSL++ SPNSCSNDLG ADS SDF T+LPPYN* SG+ F  A  A +LL+RYF QSASP* FLNRL HEWFDIF+  *R S V
Subject  12247  YVE*KILYSLQKS*RMPVSNGILSGEVKYKSVFSK*VLM*AQYFS*SEMLPACDF*LLQLNRDIA*TK*SPTRQSMFALLESLTNSLFLKVRATNRSLSSGLIKTPHELDRDQHCSAKILSFISRLERRMKFITSSIVYFCPSVFTSGSHFSAVIGYASGFVIWYIASSTVIPHILHQPTSRSLNIRSPNSCSNDLGVADSNSDFFTVLPPYN*TSGKVFMLAVWATMLLERYFLQSASP*YFLNRLPHEWFDIFVWW*RTSVV  13038

Range 3: 12254 to 13039 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
283.8 bits(613) 0.0 135/262(52%) 0/262(0%) Minus/Minus
Query       24  VCGVEDTVLFTKVVENASK*GYPVRRREE*IGTFQVLPDMSTILLIKRNITRL*LLCSLVK*GHGVN*IIAYATVYICVTRVVD*LVIFERKRHETFLIVGINQNPTRIR*RPTLLYQNSITRI*VRKTHEILNIFHRVFLAFSLYIRITFFSYDRKSIGVRELVRCLFHSHATHLAPPHISLA*YE*SQFLLE*SRSCRLKIGLPYNSTSVQLSIW*IFHVRGVCGNTFR*VFLPICLPVKFFEQTFP*VVRHLHPTVES*  809
                VCG++D +LF +++ENA +* YP+ R E *IG F V  D+S IL ++RN+TRL LL   ++*GH VN*+I +ATVY+ V  +V+  VI + + ++ F I+G+NQN  RI *RPTL   + I  I*V  THEI ++FHRVFL  S +I I FF  DR    VR+LV CL HS+  HL P H+   *++ S FLLE  RS R K GL ++ST+VQL++   F+V  V  N  R VF PICLPV  FEQT P*VVRHL   VE+*
Subject  12254  VCGIKDIILFAEIIENAGE*RYPIGRSEI*IGIF*VSSDVSAILFVERNVTRLRLLTPTIE*GHSVN*VITHATVYVRVA*IVNQFVILKSESNKPFFIIGVNQNSARIG*RPTLFR*DFIIYI*VGTTHEIHHVFHRVFLPLSFHIWIAFFRCDRIRFRVRDLVHCLLHSYPAHLTPTHVPFT*HQKS*FLLERPRSRRFKFGLLHSSTAVQLNVRQSFYVSCVGYNALREVFPPICLPVVLFEQTSP*VVRHLRLVVEN*  13039

Range 4: 12396 to 13040 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
193.5 bits(416) 0.0 109/215(51%) 0/215(0%) Minus/Minus
Query      166  CMWSRRHCTLYKSRRECQ*VRVSCQAT*RINRYFPSTS*YEYNTSHKAKYYPPVTSVLFG*IGTWRKLDNRLRDSLYLRYSSR*LTRYF*T*ETRNVPYRRD*SEPHTN*IKTNIALPKFYHSYLS*KDA*NSQHLPSSIFGLQSLHPDHIFQLR*EKHWGS*VGTLPLPQSCHTSCPTPHLARLV*IVPIPARMISELQTQNRTSLQFYLRTIE  810
                CMW++R+ TL ++ REC+*V VS +  * INRYF S  * + NT  +AK YP  TS  + *IGT RKL N  RDSL  R  +R*  RY * *E + V Y R *S+  TN I+TN    +FYH YL   DA*NS  LPS I   Q  H D IF L  +   GS* GTLP PQ   TS   P    L   V IPAR  SE   Q RTS QFY RT E
Subject  12396  CMWNKRYYTLCRNHRECR*VTVSYREK*NINRYFLSKF*CKRNTFRRAKCYPLATSDSYN*IGT*RKLSNHPRDSLCSRCLNR*PIRYS*K*EQQTVLYHRG*SKLRTNWIETNTVPLRFYHLYLGWNDA*NSSRLPSCISAPQFSHLDRIFPL*SDTLQGS*FGTLPPPQLSRTSYTNPRPVHLTSEVLIPARTTSESPIQIRTSSQFYRRTTE  13040

Range 5: 12237 to 12344 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.2 bits(149) 0.0 32/36(89%) 0/36(0%) Minus/Minus
Query        7  GISSNLPPRKIF*TDFPMSGSTSSSNGRELAE*LLN  114
                GISSNLPPR  F*TDFPMSGSTSSS GRELA *LLN
Subject  12237  GISSNLPPRSTF*TDFPMSGSTSSSGGRELAL*LLN  12344

Range 6: 12243 to 13040 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
235.2 bits(507) 0.0 135/266(51%) 0/266(0%) Plus/Plus
Query       13  KLLG*LSTVG*RCRTTHGKVCSKNFTGRQIGRNTYLKVLPHTPRT*KIYQILNCTEVEL*GSPILSLQLRDHSSRNWDYSY*ASEMWGGARCVA*LWKRQRTNSRTPMLFLS*LKNVIRM*RLKAKNTRWKMLRISCVFLT*IRVIEFW*SNVGLYLIRVGF*LIPTIRNVSCLLRSKITS*STTRVTQI*TVA*AII*FTPCPYLTKEHRSHRRVIFRFMRSIVLISGSTWKVPIYSSRRLTGYPYLLAXXXXXXXXXXXXXPHT  810
                +L  * ST   RCRTTHG+VCSK+ TGRQIG NT L+ L  T  T*K+ +  +CT VEL* SP L+ +LR  SSRN D+  * +  W G RC  *LW+RQ T SRT     S  KN I+M*+L+ +NTRWK   ISCV  T*I +I+   ++VGLY IR  F*L P I+N   L   +IT+  T + T+ *TVA  I *FT CPY     RS +RV FR  +SI L S  T K+PIY S    GY Y  AFS    KS +S  PHT
Subject  12243  ELQR*FSTTRRRCRTTHGEVCSKSTTGRQIGGNTSLRAL*PTQLT*KLCRTFSCTAVEL*RSPNLNRRLRGRSSRN*DF*C*VNGTWVGVRCAG*LWRRQCTKSRTLKRIRSQRKNAIQM*KLRGRNTRWKT**ISCVVPT*I*MIKS*RNSVGLYPIRAEF*LTPMIKNGLLLSLLRITNWLTIQATRT*TVAWVIT*FTLCPYSIVGVRSRKRVTFRSTKSIALTSELT*KIPIYISLLPIGYRYSPAFSMISAKSIISFIPHT  13040

Range 7: 12238 to 12786 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
188.0 bits(404) 0.0 99/183(54%) 0/183(0%) Plus/Plus
Query        8  FRSYSASSLPLDEDVEPLMGKSVQKILRGGRLEEIPI*KYCRTLRGREKSTRYSIVRR*NCKEVRF*VCSSEIIRAGIGTIHTKRARCGVGQDVWHDCGRGSVPTHEPQCFSYRS*KM*SGCKD*RPKILDGRC*EFHASF*LRYE**NFGRAMLVFI*FVWGSD*SRR*GTFRVSYVQK*RV  556
                F+SY+ASSLP DEDVEPLMGKSVQK+LRGGRLEEIP+*++C      +     S+VRR*NC+EVR *+  SE++RAGI T   K    G+  DV  +CG G+VP HEP   S  S KM S C++*  +I DGR  EFHASF  RY+**N    +LV I FV   D* R * T   S+  +*R+
Subject  12238  FKSYNASSLPPDEDVEPLMGKSVQKVLRGGRLEEIPL*EHCSPHS*HKNFAGRSVVRR*NCEEVRI*IGDSEVVRAGIRTSDVK*TGRGLV*DVRDNCGGGNVPNHEP*SVSDHSGKMRSRCEN*GAEIHDGRRDEFHASFQPRYK**NLSGTVLVSIQFVRSFD*PR**RTVCCSHF*E*RI  12786

Range 8: 12847 to 12996 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.0 bits(105) 0.0 25/50(50%) 0/50(0%) Plus/Plus
Query      617  HVPI*PKSTEVTGG*YFAL*EVLYSYQEVLGKYRFILHVA*QDTLTYWHS  766
                +VPI    +EV  G*+FAL +VL  +Q +L KYRFI H +  DT+T+ HS
Subject  12847  YVPIQL*ESEVASG*HFALRKVLRLHQNLLRKYRFIFHFSR*DTVTHRHS  12996

Grapevine rootstock stem lesion associated virus methyltransferase/helicase polyprotein, RNA dependent RNA polymerase, p6, HSP70 like protein, HSP90 like protein, coat protein duplicate, coat protein, p19, and p24 genes, complete cds

Sequence ID: AF314061.1 Length: 16527 Number of Matches: 8

Range 1: 12248 to 13039 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
549.1 bits(1192) 0.0 218/264(83%) 0/264(0%) Plus/Plus
Query       18  TRLALYRWMKMSNHSWESLFKKFYGEADWKKYLSKSIAAHSADVKNLPDTQLYGGRIVRKSDFESAAPRSFEQELGLFILSERDVGWGKMCGMTVEEAAYQLTNPNAFPIVAEKCDPDVKTEGQKYSMEDVENFMRLSNLDTSDRILVEQCWSLSNSCGVLINPDDKERFVSLTFKNNELINDSSNANIDCRVSDYLVYAMSLFNQRAQKSQAGNISLYEKYCTHIRKYLESTDLFFTSPDRIPLLTGILYDFCKEYSVFYSTY  809
                T L LY   KMSNHSW SLFKK+YGEADW+KYLSKSI AH+A++K LPD QLYGGR V+KS+FESA PRSFEQELGL +LSERDVGW KMCG+TVEEA YQ+TNP A+PI AEKCDPDVKTEGQKY+MEDV NFMR SNLD +D+IL EQCWSLSNSCGVLINPDDKERFV+LTFKNNEL+NDSSNANIDCRV DYLVYAMSLFN R+QKSQAGNISLYEKYC +IR YLE+TDL+FTSPDRIPLLTGILYDFCKEY++FYSTY
Subject  12248  TTLVLYHQTKMSNHSWGSLFKKYYGEADWRKYLSKSIVAHTANIKTLPDVQLYGGRTVKKSEFESATPRSFEQELGLLMLSERDVGWCKMCGITVEEAMYQITNPEAYPITAEKCDPDVKTEGQKYTMEDVMNFMRRSNLDINDKILAEQCWSLSNSCGVLINPDDKERFVALTFKNNELVNDSSNANIDCRVGDYLVYAMSLFNCRSQKSQAGNISLYEKYCAYIRTYLENTDLYFTSPDRIPLLTGILYDFCKEYNIFYSTY  13039

Range 2: 12247 to 13038 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
446.0 bits(967) 0.0 201/264(76%) 0/264(0%) Minus/Minus
Query       17  YVE*KTLYSLQKS*RMPVSKGILSGDVKNKSVLSKYFLI*VQYFS*SEILPACDFCALWLNRDMA*TR*SLTRQSIFALLESLINSLFLNVRDTKRSLSSGLIRTPHELDKDQHCSTKILSLVSKLERRMKFSTSSIEYFWPSVFTSGSHFSATIGKALGFVSWYAASSTVMPHILPHPTSRSLSMNSPNSCSNDLGAADSKSDFLTILPPYN*VSGRFFTSAECAAILLDRYFFQSASP*NFLNRLSHEWFDIFIQR*RASRV  808
                YVE*K LYSLQKS*RMPVS GILSG+VK KSV SK  L+* QYFS*SE+LPACDF  L LNRD+A*T+*S TRQS+FALLESL NSLFL VR T RSLSSGLI+TPHELD+DQHCS KILS +S+LERRMKF TSSI YF PSVFTSGSHFSA IG A GFV WY ASSTV+PHIL  PTSRSL++ SPNSCSNDLG ADS SDF T+LPPYN* SG+ F  A  A +LL+RYF QSASP* FLNRL HEWFDIF+  *R S V
Subject  12247  YVE*KILYSLQKS*RMPVSNGILSGEVKYKSVFSK*VLM*AQYFS*SEMLPACDF*LLQLNRDIA*TK*SPTRQSMFALLESLTNSLFLKVRATNRSLSSGLIKTPHELDRDQHCSAKILSFISRLERRMKFITSSIVYFCPSVFTSGSHFSAVIGYASGFVIWYIASSTVIPHILHQPTSRSLNIRSPNSCSNDLGVADSNSDFFTVLPPYN*TSGKVFMLAVWATMLLERYFLQSASP*YFLNRLPHEWFDIFVWW*RTSVV  13038

Range 3: 12254 to 13039 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
283.8 bits(613) 0.0 135/262(52%) 0/262(0%) Minus/Minus
Query       24  VCGVEDTVLFTKVVENASK*GYPVRRREE*IGTFQVLPDMSTILLIKRNITRL*LLCSLVK*GHGVN*IIAYATVYICVTRVVD*LVIFERKRHETFLIVGINQNPTRIR*RPTLLYQNSITRI*VRKTHEILNIFHRVFLAFSLYIRITFFSYDRKSIGVRELVRCLFHSHATHLAPPHISLA*YE*SQFLLE*SRSCRLKIGLPYNSTSVQLSIW*IFHVRGVCGNTFR*VFLPICLPVKFFEQTFP*VVRHLHPTVES*  809
                VCG++D +LF +++ENA +* YP+ R E *IG F V  D+S IL ++RN+TRL LL   ++*GH VN*+I +ATVY+ V  +V+  VI + + ++ F I+G+NQN  RI *RPTL   + I  I*V  THEI ++FHRVFL  S +I I FF  DR    VR+LV CL HS+  HL P H+   *++ S FLLE  RS R K GL ++ST+VQL++   F+V  V  N  R VF PICLPV  FEQT P*VVRHL   VE+*
Subject  12254  VCGIKDIILFAEIIENAGE*RYPIGRSEI*IGIF*VSSDVSAILFVERNVTRLRLLTPTIE*GHSVN*VITHATVYVRVA*IVNQFVILKSESNKPFFIIGVNQNSARIG*RPTLFR*DFIIYI*VGTTHEIHHVFHRVFLPLSFHIWIAFFRCDRIRFRVRDLVHCLLHSYPAHLTPTHVPFT*HQKS*FLLERPRSRRFKFGLLHSSTAVQLNVRQSFYVSCVGYNALREVFPPICLPVVLFEQTSP*VVRHLRLVVEN*  13039

Range 4: 12396 to 13040 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
193.5 bits(416) 0.0 109/215(51%) 0/215(0%) Minus/Minus
Query      166  CMWSRRHCTLYKSRRECQ*VRVSCQAT*RINRYFPSTS*YEYNTSHKAKYYPPVTSVLFG*IGTWRKLDNRLRDSLYLRYSSR*LTRYF*T*ETRNVPYRRD*SEPHTN*IKTNIALPKFYHSYLS*KDA*NSQHLPSSIFGLQSLHPDHIFQLR*EKHWGS*VGTLPLPQSCHTSCPTPHLARLV*IVPIPARMISELQTQNRTSLQFYLRTIE  810
                CMW++R+ TL ++ REC+*V VS +  * INRYF S  * + NT  +AK YP  TS  + *IGT RKL N  RDSL  R  +R*  RY * *E + V Y R *S+  TN I+TN    +FYH YL   DA*NS  LPS I   Q  H D IF L  +   GS* GTLP PQ   TS   P    L   V IPAR  SE   Q RTS QFY RT E
Subject  12396  CMWNKRYYTLCRNHRECR*VTVSYREK*NINRYFLSKF*CKRNTFRRAKCYPLATSDSYN*IGT*RKLSNHPRDSLCSRCLNR*PIRYS*K*EQQTVLYHRG*SKLRTNWIETNTVPLRFYHLYLGWNDA*NSSRLPSCISAPQFSHLDRIFPL*SDTLQGS*FGTLPPPQLSRTSYTNPRPVHLTSEVLIPARTTSESPIQIRTSSQFYRRTTE  13040

Range 5: 12237 to 12344 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.2 bits(149) 0.0 32/36(89%) 0/36(0%) Minus/Minus
Query        7  GISSNLPPRKIF*TDFPMSGSTSSSNGRELAE*LLN  114
                GISSNLPPR  F*TDFPMSGSTSSS GRELA *LLN
Subject  12237  GISSNLPPRSTF*TDFPMSGSTSSSGGRELAL*LLN  12344

Range 6: 12243 to 13040 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
235.2 bits(507) 0.0 135/266(51%) 0/266(0%) Plus/Plus
Query       13  KLLG*LSTVG*RCRTTHGKVCSKNFTGRQIGRNTYLKVLPHTPRT*KIYQILNCTEVEL*GSPILSLQLRDHSSRNWDYSY*ASEMWGGARCVA*LWKRQRTNSRTPMLFLS*LKNVIRM*RLKAKNTRWKMLRISCVFLT*IRVIEFW*SNVGLYLIRVGF*LIPTIRNVSCLLRSKITS*STTRVTQI*TVA*AII*FTPCPYLTKEHRSHRRVIFRFMRSIVLISGSTWKVPIYSSRRLTGYPYLLAXXXXXXXXXXXXXPHT  810
                +L  * ST   RCRTTHG+VCSK+ TGRQIG NT L+ L  T  T*K+ +  +CT VEL* SP L+ +LR  SSRN D+  * +  W G RC  *LW+RQ T SRT     S  KN I+M*+L+ +NTRWK   ISCV  T*I +I+   ++VGLY IR  F*L P I+N   L   +IT+  T + T+ *TVA  I *FT CPY     RS +RV FR  +SI L S  T K+PIY S    GY Y  AFS    KS +S  PHT
Subject  12243  ELQR*FSTTRRRCRTTHGEVCSKSTTGRQIGGNTSLRAL*PTQLT*KLCRTFSCTAVEL*RSPNLNRRLRGRSSRN*DF*C*VNGTWVGVRCAG*LWRRQCTKSRTLKRIRSQRKNAIQM*KLRGRNTRWKT**ISCVVPT*I*MIKS*RNSVGLYPIRAEF*LTPMIKNGLLLSLLRITNWLTIQATRT*TVAWVIT*FTLCPYSIVGVRSRKRVTFRSTKSIALTSELT*KIPIYISLLPIGYRYSPAFSMISAKSIISFIPHT  13040

Range 7: 12238 to 12786 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
188.0 bits(404) 0.0 99/183(54%) 0/183(0%) Plus/Plus
Query        8  FRSYSASSLPLDEDVEPLMGKSVQKILRGGRLEEIPI*KYCRTLRGREKSTRYSIVRR*NCKEVRF*VCSSEIIRAGIGTIHTKRARCGVGQDVWHDCGRGSVPTHEPQCFSYRS*KM*SGCKD*RPKILDGRC*EFHASF*LRYE**NFGRAMLVFI*FVWGSD*SRR*GTFRVSYVQK*RV  556
                F+SY+ASSLP DEDVEPLMGKSVQK+LRGGRLEEIP+*++C      +     S+VRR*NC+EVR *+  SE++RAGI T   K    G+  DV  +CG G+VP HEP   S  S KM S C++*  +I DGR  EFHASF  RY+**N    +LV I FV   D* R * T   S+  +*R+
Subject  12238  FKSYNASSLPPDEDVEPLMGKSVQKVLRGGRLEEIPL*EHCSPHS*HKNFAGRSVVRR*NCEEVRI*IGDSEVVRAGIRTSDVK*TGRGLV*DVRDNCGGGNVPNHEP*SVSDHSGKMRSRCEN*GAEIHDGRRDEFHASFQPRYK**NLSGTVLVSIQFVRSFD*PR**RTVCCSHF*E*RI  12786

Range 8: 12847 to 12996 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.0 bits(105) 0.0 25/50(50%) 0/50(0%) Plus/Plus
Query      617  HVPI*PKSTEVTGG*YFAL*EVLYSYQEVLGKYRFILHVA*QDTLTYWHS  766
                +VPI    +EV  G*+FAL +VL  +Q +L KYRFI H +  DT+T+ HS
Subject  12847  YVPIQL*ESEVASG*HFALRKVLRLHQNLLRKYRFIFHFSR*DTVTHRHS  12996

Grapevine leafroll associated virus 2 isolate GLV2 1050 02 polyprotein (ORF1a), RNA dependent RNA polymerase (ORF1b), 6.3 kDa small hydrophobic protein (ORF2), putative heat shock protein 70 (ORF3), 63 kDa putative cell to cell movemennt protein (ORF4), minor capsid protein (CPm), major capsid protein (CP), 19 kDa protein (ORF7), and 24 kDa protein (ORF8) genes, complete cds

Sequence ID: JX513891.1 Length: 16489 Number of Matches: 8

Range 1: 12236 to 13027 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
547.3 bits(1188) 0.0 217/264(82%) 0/264(0%) Plus/Plus
Query       18  TRLALYRWMKMSNHSWESLFKKFYGEADWKKYLSKSIAAHSADVKNLPDTQLYGGRIVRKSDFESAAPRSFEQELGLFILSERDVGWGKMCGMTVEEAAYQLTNPNAFPIVAEKCDPDVKTEGQKYSMEDVENFMRLSNLDTSDRILVEQCWSLSNSCGVLINPDDKERFVSLTFKNNELINDSSNANIDCRVSDYLVYAMSLFNQRAQKSQAGNISLYEKYCTHIRKYLESTDLFFTSPDRIPLLTGILYDFCKEYSVFYSTY  809
                T L LY   KMSNHSW SLFKK+YGEADW+KYLSKSI AH+A++K LPD QLYGGR V+KS+FES  PRSFEQELGL +LSERDVGW KMCG+TVEEA YQ+TNP A+PI AEKCDPDVKTEGQKY+MEDV NFMR SNLD +D+IL EQCWSLSNSCGVLINPDDKERFV+LTFKNNEL+NDSSNANIDCRV DYLVYAMSLFN R+QKSQAGNISLYEKYC +IR YLE+TDL+FTSPDRIPLLTGILYDFCKEY++FYSTY
Subject  12236  TTLVLYHQTKMSNHSWGSLFKKYYGEADWRKYLSKSIVAHTANIKTLPDVQLYGGRTVKKSEFESVTPRSFEQELGLLMLSERDVGWCKMCGITVEEAMYQITNPEAYPITAEKCDPDVKTEGQKYTMEDVMNFMRRSNLDINDKILAEQCWSLSNSCGVLINPDDKERFVALTFKNNELVNDSSNANIDCRVGDYLVYAMSLFNCRSQKSQAGNISLYEKYCAYIRTYLENTDLYFTSPDRIPLLTGILYDFCKEYNIFYSTY  13027

Range 2: 12235 to 13026 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
442.8 bits(960) 0.0 199/264(75%) 0/264(0%) Minus/Minus
Query       17  YVE*KTLYSLQKS*RMPVSKGILSGDVKNKSVLSKYFLI*VQYFS*SEILPACDFCALWLNRDMA*TR*SLTRQSIFALLESLINSLFLNVRDTKRSLSSGLIRTPHELDKDQHCSTKILSLVSKLERRMKFSTSSIEYFWPSVFTSGSHFSATIGKALGFVSWYAASSTVMPHILPHPTSRSLSMNSPNSCSNDLGAADSKSDFLTILPPYN*VSGRFFTSAECAAILLDRYFFQSASP*NFLNRLSHEWFDIFIQR*RASRV  808
                YVE*K LYSLQKS*RMPVS GILSG+VK KSV SK  L+* QYFS*SE+LPACDF  L LNRD+A*T+*S TRQS+FALLESL NSLFL VR T RSLSSGLI+TPHELD+DQHCS KILS +S+LERRMKF TSS+ YF PSVFTSGSHFSA IG A GFV WY ASSTV+PHIL  PTSRSL++ SPNSCSNDLG  DS SDF T+LPPYN* SG+ F  A  A +LL+RYF QSASP* FLNRL HEWFDIF+  *R S V
Subject  12235  YVE*KILYSLQKS*RMPVSNGILSGEVKYKSVFSK*VLM*AQYFS*SEMLPACDF*LLQLNRDIA*TK*SPTRQSMFALLESLTNSLFLKVRATNRSLSSGLIKTPHELDRDQHCSAKILSFISRLERRMKFITSSMVYFCPSVFTSGSHFSAVIGYASGFVIWYIASSTVIPHILHQPTSRSLNIRSPNSCSNDLGVTDSNSDFFTVLPPYN*TSGKVFMLAVWATMLLERYFLQSASP*YFLNRLPHEWFDIFVWW*RTSVV  13026

Range 3: 12242 to 13027 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
275.5 bits(595) 0.0 132/262(50%) 0/262(0%) Minus/Minus
Query       24  VCGVEDTVLFTKVVENASK*GYPVRRREE*IGTFQVLPDMSTILLIKRNITRL*LLCSLVK*GHGVN*IIAYATVYICVTRVVD*LVIFERKRHETFLIVGINQNPTRIR*RPTLLYQNSITRI*VRKTHEILNIFHRVFLAFSLYIRITFFSYDRKSIGVRELVRCLFHSHATHLAPPHISLA*YE*SQFLLE*SRSCRLKIGLPYNSTSVQLSIW*IFHVRGVCGNTFR*VFLPICLPVKFFEQTFP*VVRHLHPTVES*  809
                VCG++D +L  +++ENA +* YP+ R E  IG F V  D+S IL ++RN+TRL LL   ++*GH VN*+I +ATVY+ V  +V+  VI + + ++ F I+G+NQN  RI *RPTL   + I  I*V  THEI ++FH VFL  S +I I FF  DR    VR+LV CL HS+  HL P H+   *++ S FLLE  RS R K GL ++ST+VQL++   F+V  V  N  R VF PICLPV  FEQT P*VVRHL   VE+*
Subject  12242  VCGIKDIILLAEIIENAGE*RYPIGRSEIQIGIF*VSSDVSAILFVERNVTRLRLLTPTIE*GHSVN*VITHATVYVRVA*IVNQFVILKSESNKPFFIIGVNQNSARIG*RPTLFR*DFIIYI*VGTTHEIHHVFHGVFLPLSFHIWIAFFRCDRIRFRVRDLVHCLLHSYPAHLTPTHVPFT*HQKS*FLLERPRSHRFKFGLLHSSTAVQLNVRQSFYVSCVGYNALREVFPPICLPVVLFEQTSP*VVRHLRLVVEN*  13027

Range 4: 12384 to 13028 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
184.8 bits(397) 0.0 106/215(49%) 0/215(0%) Minus/Minus
Query      166  CMWSRRHCTLYKSRRECQ*VRVSCQAT*RINRYFPSTS*YEYNTSHKAKYYPPVTSVLFG*IGTWRKLDNRLRDSLYLRYSSR*LTRYF*T*ETRNVPYRRD*SEPHTN*IKTNIALPKFYHSYLS*KDA*NSQHLPSSIFGLQSLHPDHIFQLR*EKHWGS*VGTLPLPQSCHTSCPTPHLARLV*IVPIPARMISELQTQNRTSLQFYLRTIE  810
                CMW++R+ T  ++ REC+*V VS +  *  NRYF S  * + NT  +AK YP  TS  + *IGT RKL N  RDSL  R  +R*  RY * *E + V Y R *S+  TN I+TN    +FYH YL   DA*NS  LP  I   Q  H D IF L  +   GS* GTLP PQ   TS   P    L   V IPAR  SE   Q RTS QFY RT E
Subject  12384  CMWNKRYYTPCRNHRECR*VTVSYREK*NTNRYFLSKF*CKRNTFRRAKCYPLATSDSYN*IGT*RKLSNHPRDSLCSRCLNR*PIRYS*K*EQQTVLYHRG*SKLRTNWIETNTVPLRFYHLYLGWNDA*NSSRLPWCISAPQFSHLDRIFPL*SDTLQGS*FGTLPPPQLSRTSYTNPRPVHLTSEVLIPARTTSESPIQIRTSSQFYRRTTE  13028

Range 5: 12225 to 12332 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.2 bits(149) 0.0 32/36(89%) 0/36(0%) Minus/Minus
Query        7  GISSNLPPRKIF*TDFPMSGSTSSSNGRELAE*LLN  114
                GISSNLPPR  F*TDFPMSGSTSSS GRELA *LLN
Subject  12225  GISSNLPPRSTF*TDFPMSGSTSSSGGRELAL*LLN  12332

Range 6: 12231 to 13028 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
225.6 bits(486) 0.0 132/266(50%) 0/266(0%) Plus/Plus
Query       13  KLLG*LSTVG*RCRTTHGKVCSKNFTGRQIGRNTYLKVLPHTPRT*KIYQILNCTEVEL*GSPILSLQLRDHSSRNWDYSY*ASEMWGGARCVA*LWKRQRTNSRTPMLFLS*LKNVIRM*RLKAKNTRWKMLRISCVFLT*IRVIEFW*SNVGLYLIRVGF*LIPTIRNVSCLLRSKITS*STTRVTQI*TVA*AII*FTPCPYLTKEHRSHRRVIFRFMRSIVLISGSTWKVPIYSSRRLTGYPYLLAXXXXXXXXXXXXXPHT  810
                +L  * ST   RCRTTHG+VCSK+ TGRQIG NT L+ L  T  T*K+ +  +CT VEL* SP L+  LR  SSRN D+  * +  W G RC  *LW+RQ T SRT     S  KN I+M*+L+ +NT WK   ISCV  T*I +I+   ++VGLY IR  F*L P I+N   L   +IT+  T + T+ *TVA  I *FT CPY     RS +RV FR  +SI L S  T K+PI  S    GY Y  AFS    +S +S  PHT
Subject  12231  ELQR*FSTTRRRCRTTHGEVCSKSTTGRQIGGNTSLRAL*PTQLT*KLCRTFSCTAVEL*RSPNLNR*LRGRSSRN*DF*C*VNGTWVGVRCAG*LWRRQCTKSRTLKRIRSQRKNAIQM*KLRGRNTPWKT**ISCVVPT*I*MIKS*RNSVGLYPIRAEF*LTPMIKNGLLLSLLRITNWLTIQATRT*TVAWVIT*FTLCPYSIVGVRSRKRVTFRSTKSIALTSELT*KIPICISLLPIGYRYSPAFSMISARSIISFIPHT  13028

Range 7: 12226 to 12774 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
184.8 bits(397) 0.0 98/183(54%) 0/183(0%) Plus/Plus
Query        8  FRSYSASSLPLDEDVEPLMGKSVQKILRGGRLEEIPI*KYCRTLRGREKSTRYSIVRR*NCKEVRF*VCSSEIIRAGIGTIHTKRARCGVGQDVWHDCGRGSVPTHEPQCFSYRS*KM*SGCKD*RPKILDGRC*EFHASF*LRYE**NFGRAMLVFI*FVWGSD*SRR*GTFRVSYVQK*RV  556
                F+SY+ASSLP DEDVEPLMGKSVQK+LRGGRLEEIP+*++C      +     S+VRR*NC+EVR *+  SE++RAGI T   K    G+  DV  +CG G+VP HEP   S  S KM S C++*  +I  GR  EFHASF  RY+**N    +LV I FV   D* R * T   S+  +*R+
Subject  12226  FKSYNASSLPPDEDVEPLMGKSVQKVLRGGRLEEIPL*EHCSPHS*HKNFAGRSVVRR*NCEEVRI*IGDSEVVRAGIRTSDVK*TGRGLV*DVRDNCGGGNVPNHEP*SVSDHSGKMRSRCEN*GAEIHHGRRDEFHASFQPRYK**NLSGTVLVSIQFVRSFD*PR**RTVCCSHF*E*RI  12774

Range 8: 12835 to 12984 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.6 bits(104) 0.0 24/50(48%) 0/50(0%) Plus/Plus
Query      617  HVPI*PKSTEVTGG*YFAL*EVLYSYQEVLGKYRFILHVA*QDTLTYWHS  766
                +VPI    +EV  G*+FAL +VL  +Q +L KYRF+ H +  DT+T+ HS
Subject  12835  YVPIQL*ESEVASG*HFALRKVLRLHQNLLRKYRFVFHFSR*DTVTHRHS  12984

Grapevine leafroll associated virus 2 isolate PG11 heat shock protein 70, heat shock protein 90, minor coat protein, major coat protein, and P19 genes, complete cds

Sequence ID: EF012720.1 Length: 5148 Number of Matches: 11

Range 1: 1694 to 2488 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
554.6 bits(1204) 0.0 218/265(82%) 0/265(0%) Plus/Plus
Query       15  VTRLALYRWMKMSNHSWESLFKKFYGEADWKKYLSKSIAAHSADVKNLPDTQLYGGRIVRKSDFESAAPRSFEQELGLFILSERDVGWGKMCGMTVEEAAYQLTNPNAFPIVAEKCDPDVKTEGQKYSMEDVENFMRLSNLDTSDRILVEQCWSLSNSCGVLINPDDKERFVSLTFKNNELINDSSNANIDCRVSDYLVYAMSLFNQRAQKSQAGNISLYEKYCTHIRKYLESTDLFFTSPDRIPLLTGILYDFCKEYSVFYSTY  809
                VT L LYRW +MSNHSW SLFKKFYGEADWKKYLS+SI  H+  VKNLPD QLYGGRIV+KSDFESAAPRSFEQELGL  L ER+VGW KMCG++VEEA YQLTNP A+P+ AEKCDPDVKTEGQKY+M+DV NFMR S LD  D++L EQCWSLSNSCGVLINPDDKERFV+LTFKNNEL+NDSSNANIDCRVSDYLVYAMSLFN R QKSQAGN+SLYE+YC +IR YLESTDL+FTSP+RIPLLTGILYDFCKEY+VFYSTY
Subject   1694  VTPLVLYRWTRMSNHSWGSLFKKFYGEADWKKYLSRSIVVHTTSVKNLPDAQLYGGRIVKKSDFESAAPRSFEQELGLLTLCEREVGWSKMCGISVEEAMYQLTNPEAYPVTAEKCDPDVKTEGQKYTMDDVVNFMRSSKLDVDDKVLAEQCWSLSNSCGVLINPDDKERFVALTFKNNELVNDSSNANIDCRVSDYLVYAMSLFNSRTQKSQAGNVSLYERYCAYIRTYLESTDLYFTSPNRIPLLTGILYDFCKEYNVFYSTY  2488

Range 2: 1693 to 2487 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
442.3 bits(959) 0.0 200/265(75%) 0/265(0%) Minus/Minus
Query       14  YVE*KTLYSLQKS*RMPVSKGILSGDVKNKSVLSKYFLI*VQYFS*SEILPACDFCALWLNRDMA*TR*SLTRQSIFALLESLINSLFLNVRDTKRSLSSGLIRTPHELDKDQHCSTKILSLVSKLERRMKFSTSSIEYFWPSVFTSGSHFSATIGKALGFVSWYAASSTVMPHILPHPTSRSLSMNSPNSCSNDLGAADSKSDFLTILPPYN*VSGRFFTSAECAAILLDRYFFQSASP*NFLNRLSHEWFDIFIQR*RASRVT  808
                YVE*KTLYSLQKS*R+PVS GIL G+VK KSVLSK  L+* QY S*SE LPACDF  L L RD+A*T+*SLTRQS+FALLESL NSLFLNVR T  SLSSGLIRTPHELD+DQHCS K LS  S L+ RMKF+TSSI YF PSV TSGSHFSA  G A GFVSWY ASST +PHIL  PTSRS ++N+P+SCSNDLGAADSKSDF TILPPYN* SG+F T      +LL+RYFFQSASP*NFLNRL HEWFDI +QR*R S VT
Subject   1693  YVE*KTLYSLQKS*RIPVSNGILLGEVKYKSVLSK*VLM*AQYLS*SETLPACDF*VLELKRDIA*TK*SLTRQSMFALLESLTNSLFLNVRATNLSLSSGLIRTPHELDRDQHCSAKTLSSTSNLDERMKFTTSSIVYFCPSVLTSGSHFSAVTGYASGFVSWYIASSTDIPHILLQPTSRSHNVNNPSSCSNDLGAADSKSDFFTILPPYN*ASGKFLTLVV*TTMLLERYFFQSASP*NFLNRLPHEWFDILVQR*RTSGVT  2487

Range 3: 1694 to 2488 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
282.4 bits(610) 0.0 136/265(51%) 0/265(0%) Minus/Minus
Query       15  VCGVEDTVLFTKVVENASK*GYPVRRREE*IGTFQVLPDMSTILLIKRNITRL*LLCSLVK*GHGVN*IIAYATVYICVTRVVD*LVIFERKRHETFLIVGINQNPTRIR*RPTLLYQNSITRI*VRKTHEILNIFHRVFLAFSLYIRITFFSYDRKSIGVRELVRCLFHSHATHLAPPHISLA*YE*SQFLLE*SRSCRLKIGLPYNSTSVQLSIW*IFHVRGVCGNTFR*VFLPICLPVKFFEQTFP*VVRHLHPTVES*PSN  809
                V GV++ VL  KV+EN SK  YPV R E  +  FQV  D+S I  I+RN+TRL LL S ++ GH VN*+I +AT+Y+ V  V++  ++F+R+ HE+FLIV IN NP  + *RP L   N I  +* R  HEI ++ HR+FL FSL +RITFFS D    GVRELV  L + +  H  P +    * +* QFLLE*SR C  K+G  +NST+VQLS+  + +  GV  N  R VFLPICLPV+ FEQT P*VVRH  P VE+*  N
Subject   1694  VRGVKNIVLLAKVIENTSKQRYPVGRGEVQVSAFQVSSDVSAIPFIERNVTRLRLLSSRIEKGHSVN*VITHATIYVRVA*VINQFIVFKREGHESFLIVRIN*NPA*VG*RPALFR*NFIIYV*FR*AHEIHHVIHRIFLPFSLNVRITFFSSDWICFGVRELVHRLLYGYPAHFTPAYFPFT*RQ*PQFLLE*SRCCGFKVGFLHNSTAVQLSVRQVLNAGGVNHNAPREVFLPICLPVELFEQTSP*VVRHPRPAVEN*RCN  2488

Range 4: 1956 to 2438 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
127.5 bits(272) 0.0 74/161(46%) 0/161(0%) Plus/Plus
Query      277  GARCVA*LWKRQRTNSRTPMLFLS*LKNVIRM*RLKAKNTRWKMLRISCVFLT*IRVIEFW*SNVGLYLIRVGF*LIPTIRNVSCLLRSKITS*STTRVTQI*TVA*AII*FTPCPYLTKEHRSHRRVIFRFMRSIVLISGSTWKVPIYSSRRLTGYPYLL  759
                G +C     +R+ TNSRTP    S LKNVIR  RLK +N RW    ISC  L *  +I+F  ++ GLY    GF*LI TIR  S   R K  +   T+ T+ * VA* I *FT CP+   E +S +RV FR M+ I L S  TWK    +S   TGY  LL
Subject   1956  GVKCAGYP*RRRCTNSRTPKHIQSLLKNVIRTLRLKGRNIRWMTW*ISCAHLN*T*MIKF*RNSAGLYPTHAGF*LILTIRKDSWPSRLKTMNWLMTQATRT*IVA*VIT*FTLCPFSILELKSRKRVTFRSMKGIALTSELTWKALTCTSPLPTGYRCLL  2438

Range 5: 1687 to 1929 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
127.1 bits(271) 0.0 55/81(68%) 0/81(0%) Plus/Plus
Query        8  FRSYSASSLPLDEDVEPLMGKSVQKILRGGRLEEIPI*KYCRTLRGREKSTRYSIVRR*NCKEVRF*VCSSEIIRAGIGTI  250
                F+SY+ASSLPLDEDVEPLMGKSVQK+LRGGRLEEIP+*++C +   R +    S+VRR*NC+E+R *+ S+EIIRAG G I
Subject   1687  FKSYTASSLPLDEDVEPLMGKSVQKVLRGGRLEEIPL*EHCGSHHQR*ELAGRSVVRR*NCEEIRL*IRSTEIIRAGTGVI  1929

Range 6: 1986 to 2489 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.0 bits(308) 0.0 83/168(49%) 0/168(0%) Minus/Minus
Query      307  CMWSRRHCTLYKSRRECQ*VRVSCQAT*RINRYFPSTS*YEYNTSHKAKYYPPVTSVLFG*IGTWRKLDNRLRDSLYLRYSSR*LTRYF*T*ETRNVPYRRD*SEPHTN*IKTNIALPKFYHSYLS*KDA*NSQHLPSSIFGLQSLHPDHIFQLR*EKHWGS*VGTLP  810
                C WS++HCT  KS RE Q*  VSC   *  ++ FPS  * + NT H+AK YP  T     * GT RKL N  RD+L  R  S *    F*T*  R  PYR+D* EP  + I+T+    K YH  L *  A*NS   PS I  LQS  PDHIFQ   +   GS*VGT P
Subject   1986  CTWSKKHCTPCKSHREYQ*ATVSCWER*STSQCFPSKF*CKRNTFHRAKRYPLATFEF*N*KGT*RKLSNHSRDNLCSRCLSH*PIHCF*T*GPRIFPYRQD*LEPRMSWIETSTVPLKLYHLRLI*MSA*NSPRHPSYISALQS*RPDHIFQQ*LDMLRGS*VGTSP  2489

Range 7: 1686 to 1793 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.0 bits(153) 0.0 32/36(89%) 0/36(0%) Minus/Minus
Query        7  GISSNLPPRKIF*TDFPMSGSTSSSNGRELAE*LLN  114
                GISSNLPPR+ F*TDFPMSGSTSSS+GRELA *LLN
Subject   1686  GISSNLPPRRTF*TDFPMSGSTSSSSGRELAV*LLN  1793

Range 8: 1845 to 1928 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
42.8 bits(87) 0.0 18/28(64%) 0/28(0%) Minus/Minus
Query      166  IVPIPARMISELQTQNRTSLQFYLRTIE  249
                I P+PARMIS L+ Q+R S QFY RT E
Subject   1845  ITPVPARMISVLRIQSRISSQFYRRTTE  1928

Range 9: 1704 to 1928 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
102.3 bits(217) 0.0 46/75(61%) 0/75(0%) Plus/Plus
Query       25  *LSTVG*RCRTTHGKVCSKNFTGRQIGRNTYLKVLPHTPRT*KIYQILNCTEVEL*GSPILSLQLRDHSSRNWDY  249
                * ST G  CRTTHG+VCSK+ TGRQIGRNT L  L  TP   +  + L+CT VEL* +P L+ Q RDHSSRNW Y
Subject   1704  *FSTAGRGCRTTHGEVCSKSSTGRQIGRNTSLGALWFTPPALRTCRTLSCTAVEL*RNPTLNPQHRDHSSRNWGY  1928

Range 10: 1987 to 2226 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.9 bits(144) 0.0 42/80(52%) 0/80(0%) Plus/Plus
Query      308  GSVPTHEPQCFSYRS*KM*SGCKD*RPKILDGRC*EFHASF*LRYE**NFGRAMLVFI*FVWGSD*SRR*GTFRVSYVQK  547
                G VPTHEP+  S   *KM*SG  D*R +I DG   EFHA  *+R  **+F   +LV I  + GS+*S R*G  R  +V K
Subject   1987  GDVPTHEPRSISSHC*KM*SGR*D*RAEIYDG*RGEFHALI*IRRR**SFSGTVLVSIQLMRGSN*S*R*GKIRGPHV*K  2226

Range 11: 2296 to 2445 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.4 bits(108) 0.0 23/50(46%) 0/50(0%) Plus/Plus
Query      617  HVPI*PKSTEVTGG*YFAL*EVLYSYQEVLGKYRFILHVA*QDTLTYWHS  766
                +VP    +++V  G* FAL*+VL  +Q +LGK+  +LH++ QDT+ YW+S
Subject   2296  YVPFQF*NSKVASG*RFAL*KVLRLHQNLLGKH*LVLHLSQQDTVAYWYS  2445

Nucleotide Sequence (540 letters)

Query ID:ds2016-58_48
Query definition:No definition line
Query length:589
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 10 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
54
108
162
216
270
324
378
432
486
540

Descriptions

Alignments

Grapevine leafroll associated virus 2, complete genome

Sequence ID: DQ286725.2 Length: 16535 Number of Matches: 8

Range 1: 10314 to 10850 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
427.7 bits(927) 0.0 174/179(97%) 0/179(0%) Plus/Plus
Query        2  IHCYPQLWCNCMTYTLCVIV*ISYGPGFTV*VFVLAQPSCFCHNFRLYLADHSRDQIFSQKRTRGFEHDRPWWRFLNRCVIFTKWLFSV*TSARLFQLSACTRMVKFTHISKITPRIFRRTSTCSLRPTTWFSVMKPNH*CTTRK*KARSLGT*NVGWVVIQVTLENTSIA*NRATPFV  538
                IHC PQLWC+CMTYTLCVIV*ISYGPGFTV*VFVLAQPSCFCHNFRLY ADHSRDQIFSQKRTRGFEHDRPWWRFLNRCVIFTKWLFSV*TSARLFQLSACTRMVKFTHISKITPRIFRRTSTCSLRPTTWFSVMKPNH*CT RK*KARSLGT*NVGWVVIQVTLENTSIA*NR TPFV
Subject  10314  IHCCPQLWCDCMTYTLCVIV*ISYGPGFTV*VFVLAQPSCFCHNFRLYPADHSRDQIFSQKRTRGFEHDRPWWRFLNRCVIFTKWLFSV*TSARLFQLSACTRMVKFTHISKITPRIFRRTSTCSLRPTTWFSVMKPNH*CTMRK*KARSLGT*NVGWVVIQVTLENTSIA*NRTTPFV  10850

Range 2: 10314 to 10850 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
408.4 bits(885) 0.0 176/179(98%) 0/179(0%) Minus/Minus
Query        2  DERSSAVSSDRSILQSYLNHNPPNVXXXXXXXXXXXSCASVIRLHNRKPCCWSQRTGRGTSEYTRSYFAYMSKLYHPCTRRQLKKSCRSLNRKQPFRKDHTTVEKPPPRTVVFETSCALLRKDLITRMISKIKTKVMAKTAWLSKYKHSNCKTWSIRYLHDDTQCVRHAIAPQLWITMD  538
                DERSSAVSSDRSILQSYLNHNPPNVLSP*RTSLLLS CASVIRLHNRKPCCWSQRTGRGTSEYTRSYFAYMSKLYHPCTRRQLKKSCRSLNRKQPFRKDHTTVEKPPPRTVVFETSCALLRKDLITRMIS+IKTKVMAKTAWLSKYKHSNCKTWSIRYLHDDTQCVRHAIAPQLW TMD
Subject  10314  DERSSAVSSDRSILQSYLNHNPPNVLSP*RTSLLLSHCASVIRLHNRKPCCWSQRTGRGTSEYTRSYFAYMSKLYHPCTRRQLKKSCRSLNRKQPFRKDHTTVEKPPPRTVVFETSCALLRKDLITRMISRIKTKVMAKTAWLSKYKHSNCKTWSIRYLHDDTQCVRHAIAPQLWTTMD  10850

Range 3: 10315 to 10851 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
404.3 bits(876) 0.0 176/179(98%) 0/179(0%) Minus/Minus
Query        3  RRTE*RGFKRSKYSPKLLESQPTQRFKSLKNEPFTFELCISDSAS*PKTMLLVSENR*RYVGIYAELFCLYE*TLPSLYTQTVEKVVPKSKPKTTIS*RSHNG*ETSTTDGRVRNLVCASAKRFDHANDQQDKDESYGKNSLVEQVQTLKL*NLVHKIFTR*HTMCTSCNCTTAVDNNG  539
                RRTE* GFKRSKYSPKLLESQPTQRFKSLKNEPFTF LCISDSAS*PKTMLLVSENR*RYVGIYAELFCLYE*TLPSLYTQTVEKVVPKSKPKTTIS*RSHNG*ETSTTDGRVRNLVCASAKRFDHANDQQDKDESYGKNSLVEQVQTLKL*NLVHKIFTR*HTMCTSCN TTAVDNNG
Subject  10315  RRTE*CGFKRSKYSPKLLESQPTQRFKSLKNEPFTFALCISDSAS*PKTMLLVSENR*RYVGIYAELFCLYE*TLPSLYTQTVEKVVPKSKPKTTIS*RSHNG*ETSTTDGRVRNLVCASAKRFDHANDQQDKDESYGKNSLVEQVQTLKL*NLVHKIFTR*HTMCTSCNRTTAVDNNG  10851

Range 4: 10313 to 10852 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
402.9 bits(873) 0.0 175/180(97%) 0/180(0%) Minus/Minus
Query        1  QTNGVARFQAIEVFSKVT*ITTHPTF*VPKERAFYFRVVHQ*FGFITENHVVGLREQVEVRRNIRGVILLI*VNFTILVHADS*KSRAEV*TENNHFVKITQRLRNLHHGRSCSKPRVRFCEKI*SRE*SAR*RRKLWQKQLG*ASTNTQTVKPGP*DIYTMTHNVYVMQLHHSCG*QWI  540
                QTNGV RFQAIEVFSKVT*ITTHPTF*VPKERAFYFR+VHQ*FGFITENHVVGLREQVEVRRNIRGVILLI*VNFTILVHADS*KSRAEV*TENNHFVKITQRLRNLHHGRSCSKPRVRFCEKI*SRE*SA *RRKLWQKQLG*ASTNTQTVKPGP*DIYTMTHNVYVMQ HHSCG QWI
Subject  10313  QTNGVVRFQAIEVFSKVT*ITTHPTF*VPKERAFYFRIVHQ*FGFITENHVVGLREQVEVRRNIRGVILLI*VNFTILVHADS*KSRAEV*TENNHFVKITQRLRNLHHGRSCSKPRVRFCEKI*SRE*SAG*RRKLWQKQLG*ASTNTQTVKPGP*DIYTMTHNVYVMQSHHSCGQQWI  10852

Range 5: 10493 to 10852 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
294.3 bits(636) 0.0 118/120(98%) 0/120(0%) Plus/Plus
Query      181  EAHTRFRTRPSVVEVSQPLCDLYEMVVFGLDFGTTFSTVCVYKDGKVYSYKQNNSAYIPTYLYLFSETNNMVFGYEAESLMHNSKVKGSFFRDLKRWVGCDSSNFGEYFDRLKPRYSVRL  540
                EAHTRFRTRPSVVEVSQPLCDLYEMVVFGLDFGTTFSTVCVYKDGKVYSYKQNNSAYIPTYLYLFSETNNMVFGYEAESLMHN+KVKGSFFRDLKRWVGCDSSNFGEYFDRLKP YSVRL
Subject  10493  EAHTRFRTRPSVVEVSQPLCDLYEMVVFGLDFGTTFSTVCVYKDGKVYSYKQNNSAYIPTYLYLFSETNNMVFGYEAESLMHNAKVKGSFFRDLKRWVGCDSSNFGEYFDRLKPHYSVRL  10852

Range 6: 10313 to 10429 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.7 bits(209) 0.0 38/39(97%) 0/39(0%) Plus/Plus
Query        1  YPLLSTAVVQLHDVHIVCHRVNILWTRFYSLSVCTCSTK  117
                YPLLSTAVV+LHDVHIVCHRVNILWTRFYSLSVCTCSTK
Subject  10313  YPLLSTAVVRLHDVHIVCHRVNILWTRFYSLSVCTCSTK  10429

Range 7: 10315 to 10749 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
329.1 bits(712) 0.0 143/145(99%) 0/145(0%) Plus/Plus
Query        3  SIVIHSCGAIA*RTHCVSSCKYLMDQVLQFECLYLLNQAVFAITFVFILLIIRVIKSFRRSAHEVSNTTVRGGGFSTVV*SLRNGCFRFRLRHDFFNCLRVQGW*SLLI*AK*LRVYSDVPLPVL*DQQHGFRL*SRITDAQLES  437
                SIV+HSCGAIA*RTHCVSSCKYLMDQVLQFECLYLLNQAVFAITFVFILLIIRVIKSFRRSAHEVSNTTVRGGGFSTVV*SLRNGCFRFRLRHDFFNCLRVQGW*SLLI*AK*LRVYSDVPLPVL*DQQHGFRL*SRITDAQ ES
Subject  10315  SIVVHSCGAIA*RTHCVSSCKYLMDQVLQFECLYLLNQAVFAITFVFILLIIRVIKSFRRSAHEVSNTTVRGGGFSTVV*SLRNGCFRFRLRHDFFNCLRVQGW*SLLI*AK*LRVYSDVPLPVL*DQQHGFRL*SRITDAQCES  10749

Range 8: 10807 to 10851 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.9 bits(72) 0.0 15/15(100%) 0/15(0%) Plus/Plus
Query      495  WRILRSLETALLRSS  539
                WRILRSLETALLRSS
Subject  10807  WRILRSLETALLRSS  10851

Grapevine leafroll associated virus 2 strain Alfie membrane associated protein P6 (P6) and Hsp70 like protein genes, complete cds

Sequence ID: AY456132.1 Length: 2466 Number of Matches: 8

Range 1: 141 to 677 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
413.0 bits(895) 0.0 169/179(94%) 0/179(0%) Plus/Plus
Query        2  IHCYPQLWCNCMTYTLCVIV*ISYGPGFTV*VFVLAQPSCFCHNFRLYLADHSRDQIFSQKRTRGFEHDRPWWRFLNRCVIFTKWLFSV*TSARLFQLSACTRMVKFTHISKITPRIFRRTSTCSLRPTTWFSVMKPNH*CTTRK*KARSLGT*NVGWVVIQVTLENTSIA*NRATPFV  538
                IHCYPQLWCN MTYTLCVIV*ISYGPGFTV*VFVLAQPSCFC+NFRLYL DHSRDQIFSQKRTRGFEHDRP WRFLNRCVIFTKWLFSV*TSARLFQ SACTRMVKFTHISKITPRIFR TSTCSL+PTTWFSVMKPNH*CTTRK*KARSLGT*NVGWV +QVTLENTSIA*NR TPFV
Subject    141  IHCYPQLWCNRMTYTLCVIV*ISYGPGFTV*VFVLAQPSCFCYNFRLYLXDHSRDQIFSQKRTRGFEHDRP*WRFLNRCVIFTKWLFSV*TSARLFQRSACTRMVKFTHISKITPRIFRLTSTCSLKPTTWFSVMKPNH*CTTRK*KARSLGT*NVGWVAVQVTLENTSIA*NRTTPFV  677

Range 2: 142 to 678 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
394.7 bits(855) 0.0 172/179(96%) 0/179(0%) Minus/Minus
Query        3  RRTE*RGFKRSKYSPKLLESQPTQRFKSLKNEPFTFELCISDSAS*PKTMLLVSENR*RYVGIYAELFCLYE*TLPSLYTQTVEKVVPKSKPKTTIS*RSHNG*ETSTTDGRVRNLVCASAKRFDHANDQQDKDESYGKNSLVEQVQTLKL*NLVHKIFTR*HTMCTSCNCTTAVDNNG  539
                RRTE* GFKRSKYSPKLLE QPTQRFKSLKNEPFTF LCISDSAS*PKTMLLVSENR*R VGIYAELFCLYE*TLPSLYTQTVEKVVPKSKPKTTIS*RSHNG*ETSTTDGRVRNLVCASAKRFDHANDQ DKDESY KNSLVEQVQTLKL*NLVHKIFTR*HTMCTSC+CTTAVDNNG
Subject    142  RRTE*CGFKRSKYSPKLLEPQPTQRFKSLKNEPFTFALCISDSAS*PKTMLLVSENR*R*VGIYAELFCLYE*TLPSLYTQTVEKVVPKSKPKTTIS*RSHNG*ETSTTDGRVRNLVCASAKRFDHANDQXDKDESYSKNSLVEQVQTLKL*NLVHKIFTR*HTMCTSCDCTTAVDNNG  678

Range 3: 141 to 677 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
391.5 bits(848) 0.0 171/179(96%) 0/179(0%) Minus/Minus
Query        2  DERSSAVSSDRSILQSYLNHNPPNVXXXXXXXXXXXSCASVIRLHNRKPCCWSQRTGRGTSEYTRSYFAYMSKLYHPCTRRQLKKSCRSLNRKQPFRKDHTTVEKPPPRTVVFETSCALLRKDLITRMISKIKTKVMAKTAWLSKYKHSNCKTWSIRYLHDDTQCVRHAIAPQLWITMD  538
                DERSSAVSSDRSILQSYLN NPPNVLSP*RTSLLLS CASVIRLHNRKPCCW QRTGRG SEYTRSYFAYMSKLYHPCTRR LKKSCRSLNRKQPFRKDHTTVEKPP RTVVFETSCALLRKDLITRMI KIKTKV+AKTAWLSKYKHSNCKTWSIRYLHDDTQCVRHAIAPQLWITMD
Subject    141  DERSSAVSSDRSILQSYLNRNPPNVLSP*RTSLLLSRCASVIRLHNRKPCCWFQRTGRGKSEYTRSYFAYMSKLYHPCTRRPLKKSCRSLNRKQPFRKDHTTVEKPPLRTVVFETSCALLRKDLITRMIXKIKTKVIAKTAWLSKYKHSNCKTWSIRYLHDDTQCVRHAIAPQLWITMD  677

Range 4: 140 to 679 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
386.4 bits(837) 0.0 170/180(94%) 0/180(0%) Minus/Minus
Query        1  QTNGVARFQAIEVFSKVT*ITTHPTF*VPKERAFYFRVVHQ*FGFITENHVVGLREQVEVRRNIRGVILLI*VNFTILVHADS*KSRAEV*TENNHFVKITQRLRNLHHGRSCSKPRVRFCEKI*SRE*SAR*RRKLWQKQLG*ASTNTQTVKPGP*DIYTMTHNVYVMQLHHSCG*QWI  540
                QTNGV RFQAIEVFSKVT*  THPTF*VPKERAFYFRVVHQ*FGFITENHVVG REQVEV RNIRGVILLI*VNFTILVHAD *KSRAEV*TENNHFVKITQRLRNLH+GRSCSKPRVRFCEKI*SRE*S R*RRKL QKQLG*ASTNTQTVKPGP*DIYTMTHNVYVM+LHHSCG*QWI
Subject    140  QTNGVVRFQAIEVFSKVT*TATHPTF*VPKERAFYFRVVHQ*FGFITENHVVGFREQVEVSRNIRGVILLI*VNFTILVHADR*KSRAEV*TENNHFVKITQRLRNLHYGRSCSKPRVRFCEKI*SRE*SXR*RRKL*QKQLG*ASTNTQTVKPGP*DIYTMTHNVYVMRLHHSCG*QWI  679

Range 5: 320 to 679 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
291.1 bits(629) 0.0 117/120(98%) 0/120(0%) Plus/Plus
Query      181  EAHTRFRTRPSVVEVSQPLCDLYEMVVFGLDFGTTFSTVCVYKDGKVYSYKQNNSAYIPTYLYLFSETNNMVFGYEAESLMHNSKVKGSFFRDLKRWVGCDSSNFGEYFDRLKPRYSVRL  540
                EAHTRFRTRPSVVEVSQPLCDLYEMVVFGLDFGTTFSTVCVYKDGKVYSYKQNNSAYIPTYLYLFSETNNMVFGYEAESLMHN+KVKGSFFRDLKRWVGC SSNFGEYFDRLKP YSVRL
Subject    320  EAHTRFRTRPSVVEVSQPLCDLYEMVVFGLDFGTTFSTVCVYKDGKVYSYKQNNSAYIPTYLYLFSETNNMVFGYEAESLMHNAKVKGSFFRDLKRWVGCGSSNFGEYFDRLKPHYSVRL  679

Range 6: 140 to 256 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
97.7 bits(207) 0.0 38/39(97%) 0/39(0%) Plus/Plus
Query        1  YPLLSTAVVQLHDVHIVCHRVNILWTRFYSLSVCTCSTK  117
                YPLLSTAVVQ HDVHIVCHRVNILWTRFYSLSVCTCSTK
Subject    140  YPLLSTAVVQSHDVHIVCHRVNILWTRFYSLSVCTCSTK  256

Range 7: 142 to 576 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
314.9 bits(681) 0.0 139/145(96%) 0/145(0%) Plus/Plus
Query        3  SIVIHSCGAIA*RTHCVSSCKYLMDQVLQFECLYLLNQAVFAITFVFILLIIRVIKSFRRSAHEVSNTTVRGGGFSTVV*SLRNGCFRFRLRHDFFNCLRVQGW*SLLI*AK*LRVYSDVPLPVL*DQQHGFRL*SRITDAQLES  437
                SIVIHSCGAIA*RTHCVSSCKYLMDQVLQFECLYLLNQAVFAITFVFI LIIRVIKSFRRSAHEVSNTTVR GGFSTVV*SLRNGCFRFRLRHDFFN LRVQGW*SLLI*AK*LRVYSD+PLPVL*+QQHGFRL*SRITDAQ ES
Subject    142  SIVIHSCGAIA*RTHCVSSCKYLMDQVLQFECLYLLNQAVFAITFVFIXLIIRVIKSFRRSAHEVSNTTVRSGGFSTVV*SLRNGCFRFRLRHDFFNGLRVQGW*SLLI*AK*LRVYSDLPLPVL*NQQHGFRL*SRITDAQRES  576

Range 8: 634 to 678 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.9 bits(72) 0.0 15/15(100%) 0/15(0%) Plus/Plus
Query      495  WRILRSLETALLRSS  539
                WRILRSLETALLRSS
Subject    634  WRILRSLETALLRSS  678

Grapevine rootstock stem lesion associated virus, complete genome

Sequence ID: NC_004724.1 Length: 16527 Number of Matches: 15

Range 1: 10537 to 10836 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
228.3 bits(492) 0.0 89/100(89%) 0/100(0%) Plus/Plus
Query      238  CDLYEMVVFGLDFGTTFSTVCVYKDGKVYSYKQNNSAYIPTYLYLFSETNNMVFGYEAESLMHNSKVKGSFFRDLKRWVGCDSSNFGEYFDRLKPRYSVR  537
                C + EMVVFGLDFGTTFSTVCVYKDGKVYS+KQNNSAYIPTYLYLFSETN+MVFGYEAESLMHN+KV+GSFFRDLKRWVGCDSSNF +YFDRLKP Y+VR
Subject  10537  CVICEMVVFGLDFGTTFSTVCVYKDGKVYSFKQNNSAYIPTYLYLFSETNHMVFGYEAESLMHNAKVRGSFFRDLKRWVGCDSSNFSDYFDRLKPHYAVR  10836

Range 2: 10346 to 10543 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
115.6 bits(246) 0.0 52/66(79%) 0/66(0%) Plus/Plus
Query       45  HCVSSCKYLMDQVLQFECLYLLNQAVFAITFVFILLIIRVIKSFRRSAHEVSNTTVRGGGFSTVV*  242
                H V  C  +MDQVLQFECLYLLNQAVFAITFVFILLIIRVIKSFRR+ HE   + VRG GFSTVV*
Subject  10346  HDVCHCIDIMDQVLQFECLYLLNQAVFAITFVFILLIIRVIKSFRRNVHETPISAVRGQGFSTVV*  10543

Range 3: 10314 to 10370 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.3 bits(62) 0.0 11/19(58%) 0/19(0%) Plus/Plus
Query       11  YPQLWCNCMTYTLCVIV*I  67
                +P+LW + +TYT+CV V*I
Subject  10314  FPRLWDDHVTYTMCVTV*I  10370

Range 4: 10548 to 10835 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
183.0 bits(393) 0.0 84/96(88%) 0/96(0%) Minus/Minus
Query      249  RTE*RGFKRSKYSPKLLESQPTQRFKSLKNEPFTFELCISDSAS*PKTMLLVSENR*RYVGIYAELFCLYE*TLPSLYTQTVEKVVPKSKPKTTIS  536
                RT * GF+RSK S KLLESQPTQRFKSLK EP TF LCISDSAS*PKTM LVSE R*RYVG+YAELFCL E*TLPSLYTQTVEKVVPKSKPKTTIS
Subject  10548  RTA*CGFRRSK*SLKLLESQPTQRFKSLKKEPLTFALCISDSAS*PKTM*LVSEKR*RYVGMYAELFCLNE*TLPSLYTQTVEKVVPKSKPKTTIS  10835

Range 5: 10352 to 10546 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
94.1 bits(199) 0.0 40/65(62%) 0/65(0%) Minus/Minus
Query       51  RSHNG*ETSTTDGRVRNLVCASAKRFDHANDQQDKDESYGKNSLVEQVQTLKL*NLVHKIFTR*H  245
                +SHN  ET TTDGR  + V  SA+RF+HAND+Q++DE Y KN LVEQ+QTL+L NLVH I+T  H
Subject  10352  KSHNSRETLTTDGRYWSFVYVSAERFNHANDEQNEDECYCKNRLVEQIQTLELQNLVHNIYTVTH  10546

Range 6: 10316 to 10372 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.8 bits(50) 0.0 11/19(58%) 0/19(0%) Minus/Minus
Query       13  DIYTMTHNVYVMQLHHSCG  69
                +IYT+TH VYV    HS G
Subject  10316  NIYTVTHIVYVT*SSHSRG  10372

Range 7: 10537 to 10839 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
132.6 bits(283) 0.0 56/101(55%) 0/101(0%) Minus/Minus
Query      238  QTNGVARFQAIEVFSKVT*ITTHPTF*VPKERAFYFRVVHQ*FGFITENHVVGLREQVEVRRNIRGVILLI*VNFTILVHADS*KSRAEV*TENNHFVKIT  540
                + N +   QAI+V +KV  + THP F*VPKERA +  ++HQ*FGFIT+NHV+   E+VEV RN+R ++L  *VN TI +HAD  KSR E+*T+NNHF   T
Subject  10537  RANRIVWLQAIKVVTKVAGVATHPAF*VPKERASHLCIMHQ*FGFITKNHVISFGEKVEVCRNVRRIVLFE*VNLTIFIHADRRKSRTEI*TKNNHFANHT  10839

Range 8: 10344 to 10547 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.6 bits(174) 0.0 41/68(60%) 0/68(0%) Minus/Minus
Query       43  KITQRLRNLHHGRSCSKPRVRFCEKI*SRE*SAR*RRKLWQKQLG*ASTNTQTVKPGP*DIYTMTHNV  246
                +ITQ+ RN  HGR   + RVRFC KI*SRE* A *RR L QK  G*A T+T+T +PGP* +Y+ TH V
Subject  10344  QITQQSRNPDHGRPILEFRVRFCGKI*SRE**AE*RRMLLQKPPG*ADTDTRTAEPGP*YLYSDTHRV  10547

Range 9: 10544 to 10834 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.4 bits(263) 0.0 56/97(58%) 0/97(0%) Plus/Plus
Query      245  FTKWLFSV*TSARLFQLSACTRMVKFTHISKITPRIFRRTSTCSLRPTTWFSVMKPNH*CTTRK*KARSLGT*NVGWVVIQVTLENTSIA*NRATPF  535
                F KWLF V* S RLF+ SAC +MV+FTH +K   R FR TST S +  TWF VMKPNH*C  ++*+A SLGT*N GWV    TL  T IA*+    F
Subject  10544  FAKWLFLV*ISVRLFRRSACIKMVRFTHSNKTILRTFRHTSTFSPKLITWFLVMKPNH*CIMQR*EALSLGT*NAGWVATPATLVTTLIA*SHTMRF  10834

Range 10: 10342 to 10569 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.6 bits(174) 0.0 39/76(51%) 0/76(0%) Plus/Plus
Query       41  YTLCVIV*ISYGPGFTV*VFVLAQPSCFCHNFRLYLADHSRDQIFSQKRTRGFEHDRPWWRFLNRCVIFTKWLFSV  268
                +T CV +   YGPG  V V V AQP  FC+N RL+ A HSRD IF QKRTR     RPW  FL+ CVI    +F +
Subject  10342  HTRCVSLYRYYGPGSAVRVSVSAQPGGFCNNIRLHSAHHSRD*IFPQKRTRNSNIGRPWSGFLDCCVICEMVVFGL  10569

Range 11: 10527 to 10724 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.5 bits(176) 0.0 40/66(61%) 0/66(0%) Plus/Plus
Query      228  STVV*SLRNGCFRFRLRHDFFNCLRVQGW*SLLI*AK*LRVYSDVPLPVL*DQQHGFRL*SRITDA  425
                S ++  LRNGCF FR R+DFF+ LRV  W* LLI  K   V+SD+PLP L +  HGF L*SRITDA
Subject  10527  SRLLCDLRNGCFWFRFRYDFFDGLRV*RW*GLLIQTKQFCVHSDIPLPFLRN*SHGFWL*SRITDA  10724

Range 12: 10335 to 10418 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.9 bits(83) 0.0 16/28(57%) 0/28(0%) Plus/Plus
Query       34  HDVHIVCHRVNILWTRFYSLSVCTCSTK  117
                H  + +C  V ILWTRF S SVC CST+
Subject  10335  HVTYTMCVTV*ILWTRFCSSSVCICSTR  10418

Range 13: 10482 to 10547 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
33.1 bits(66) 0.0 13/22(59%) 0/22(0%) Plus/Plus
Query      181  EAHTRFRTRPSVVEVSQPLCDL  246
                E +T+ + RPSVV VS+ LCDL
Subject  10482  ETYTKLQYRPSVVRVSRLLCDL  10547

Range 14: 10342 to 10590 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
111.5 bits(237) 0.0 46/83(55%) 0/83(0%) Minus/Minus
Query       41  KKSCRSLNRKQPFRKDHTTVEKPPPRTVVFETSCALLRKDLITRMISKIKTKVMAKTAWLSKYKHSNCKTWSIRYLHDDTQCV  289
                +KS   +  K     +HTTVEKP PRT     SC  LRKDLITRM+S++KT V+AKTAWLS+Y+HSNC+TWSI  +   T C+
Subject  10342  RKSRTEI*TKNNHFANHTTVEKP*PRTADIGVSCTFLRKDLITRMMSRMKTNVIAKTAWLSRYRHSNCRTWSIISIQ*HTSCM  10590

Range 15: 10526 to 10723 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.3 bits(193) 0.0 41/66(62%) 0/66(0%) Minus/Minus
Query      227  ASVIRLHNRKPCCWSQRTGRGTSEYTRSYFAYMSKLYHPCTRRQLKKSCRSLNRKQPFRKDHTTVE  424
                ASVIRLHN+KPC   +R GRG SE T++ F  MSK YH  TRR  KKS R+LN+KQPFRK H + E
Subject  10526  ASVIRLHNQKPCD*FRRKGRGMSECTQNCFV*MSKPYHLYTRRPSKKSYRNLNQKQPFRKSHNSRE  10723

Grapevine rootstock stem lesion associated virus methyltransferase/helicase polyprotein, RNA dependent RNA polymerase, p6, HSP70 like protein, HSP90 like protein, coat protein duplicate, coat protein, p19, and p24 genes, complete cds

Sequence ID: AF314061.1 Length: 16527 Number of Matches: 15

Range 1: 10537 to 10836 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
228.3 bits(492) 0.0 89/100(89%) 0/100(0%) Plus/Plus
Query      238  CDLYEMVVFGLDFGTTFSTVCVYKDGKVYSYKQNNSAYIPTYLYLFSETNNMVFGYEAESLMHNSKVKGSFFRDLKRWVGCDSSNFGEYFDRLKPRYSVR  537
                C + EMVVFGLDFGTTFSTVCVYKDGKVYS+KQNNSAYIPTYLYLFSETN+MVFGYEAESLMHN+KV+GSFFRDLKRWVGCDSSNF +YFDRLKP Y+VR
Subject  10537  CVICEMVVFGLDFGTTFSTVCVYKDGKVYSFKQNNSAYIPTYLYLFSETNHMVFGYEAESLMHNAKVRGSFFRDLKRWVGCDSSNFSDYFDRLKPHYAVR  10836

Range 2: 10346 to 10543 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
115.6 bits(246) 0.0 52/66(79%) 0/66(0%) Plus/Plus
Query       45  HCVSSCKYLMDQVLQFECLYLLNQAVFAITFVFILLIIRVIKSFRRSAHEVSNTTVRGGGFSTVV*  242
                H V  C  +MDQVLQFECLYLLNQAVFAITFVFILLIIRVIKSFRR+ HE   + VRG GFSTVV*
Subject  10346  HDVCHCIDIMDQVLQFECLYLLNQAVFAITFVFILLIIRVIKSFRRNVHETPISAVRGQGFSTVV*  10543

Range 3: 10314 to 10370 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.3 bits(62) 0.0 11/19(58%) 0/19(0%) Plus/Plus
Query       11  YPQLWCNCMTYTLCVIV*I  67
                +P+LW + +TYT+CV V*I
Subject  10314  FPRLWDDHVTYTMCVTV*I  10370

Range 4: 10548 to 10835 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
183.0 bits(393) 0.0 84/96(88%) 0/96(0%) Minus/Minus
Query      249  RTE*RGFKRSKYSPKLLESQPTQRFKSLKNEPFTFELCISDSAS*PKTMLLVSENR*RYVGIYAELFCLYE*TLPSLYTQTVEKVVPKSKPKTTIS  536
                RT * GF+RSK S KLLESQPTQRFKSLK EP TF LCISDSAS*PKTM LVSE R*RYVG+YAELFCL E*TLPSLYTQTVEKVVPKSKPKTTIS
Subject  10548  RTA*CGFRRSK*SLKLLESQPTQRFKSLKKEPLTFALCISDSAS*PKTM*LVSEKR*RYVGMYAELFCLNE*TLPSLYTQTVEKVVPKSKPKTTIS  10835

Range 5: 10352 to 10546 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
94.1 bits(199) 0.0 40/65(62%) 0/65(0%) Minus/Minus
Query       51  RSHNG*ETSTTDGRVRNLVCASAKRFDHANDQQDKDESYGKNSLVEQVQTLKL*NLVHKIFTR*H  245
                +SHN  ET TTDGR  + V  SA+RF+HAND+Q++DE Y KN LVEQ+QTL+L NLVH I+T  H
Subject  10352  KSHNSRETLTTDGRYWSFVYVSAERFNHANDEQNEDECYCKNRLVEQIQTLELQNLVHNIYTVTH  10546

Range 6: 10316 to 10372 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.8 bits(50) 0.0 11/19(58%) 0/19(0%) Minus/Minus
Query       13  DIYTMTHNVYVMQLHHSCG  69
                +IYT+TH VYV    HS G
Subject  10316  NIYTVTHIVYVT*SSHSRG  10372

Range 7: 10537 to 10839 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
132.6 bits(283) 0.0 56/101(55%) 0/101(0%) Minus/Minus
Query      238  QTNGVARFQAIEVFSKVT*ITTHPTF*VPKERAFYFRVVHQ*FGFITENHVVGLREQVEVRRNIRGVILLI*VNFTILVHADS*KSRAEV*TENNHFVKIT  540
                + N +   QAI+V +KV  + THP F*VPKERA +  ++HQ*FGFIT+NHV+   E+VEV RN+R ++L  *VN TI +HAD  KSR E+*T+NNHF   T
Subject  10537  RANRIVWLQAIKVVTKVAGVATHPAF*VPKERASHLCIMHQ*FGFITKNHVISFGEKVEVCRNVRRIVLFE*VNLTIFIHADRRKSRTEI*TKNNHFANHT  10839

Range 8: 10344 to 10547 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.6 bits(174) 0.0 41/68(60%) 0/68(0%) Minus/Minus
Query       43  KITQRLRNLHHGRSCSKPRVRFCEKI*SRE*SAR*RRKLWQKQLG*ASTNTQTVKPGP*DIYTMTHNV  246
                +ITQ+ RN  HGR   + RVRFC KI*SRE* A *RR L QK  G*A T+T+T +PGP* +Y+ TH V
Subject  10344  QITQQSRNPDHGRPILEFRVRFCGKI*SRE**AE*RRMLLQKPPG*ADTDTRTAEPGP*YLYSDTHRV  10547

Range 9: 10544 to 10834 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.4 bits(263) 0.0 56/97(58%) 0/97(0%) Plus/Plus
Query      245  FTKWLFSV*TSARLFQLSACTRMVKFTHISKITPRIFRRTSTCSLRPTTWFSVMKPNH*CTTRK*KARSLGT*NVGWVVIQVTLENTSIA*NRATPF  535
                F KWLF V* S RLF+ SAC +MV+FTH +K   R FR TST S +  TWF VMKPNH*C  ++*+A SLGT*N GWV    TL  T IA*+    F
Subject  10544  FAKWLFLV*ISVRLFRRSACIKMVRFTHSNKTILRTFRHTSTFSPKLITWFLVMKPNH*CIMQR*EALSLGT*NAGWVATPATLVTTLIA*SHTMRF  10834

Range 10: 10342 to 10569 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.6 bits(174) 0.0 39/76(51%) 0/76(0%) Plus/Plus
Query       41  YTLCVIV*ISYGPGFTV*VFVLAQPSCFCHNFRLYLADHSRDQIFSQKRTRGFEHDRPWWRFLNRCVIFTKWLFSV  268
                +T CV +   YGPG  V V V AQP  FC+N RL+ A HSRD IF QKRTR     RPW  FL+ CVI    +F +
Subject  10342  HTRCVSLYRYYGPGSAVRVSVSAQPGGFCNNIRLHSAHHSRD*IFPQKRTRNSNIGRPWSGFLDCCVICEMVVFGL  10569

Range 11: 10527 to 10724 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.5 bits(176) 0.0 40/66(61%) 0/66(0%) Plus/Plus
Query      228  STVV*SLRNGCFRFRLRHDFFNCLRVQGW*SLLI*AK*LRVYSDVPLPVL*DQQHGFRL*SRITDA  425
                S ++  LRNGCF FR R+DFF+ LRV  W* LLI  K   V+SD+PLP L +  HGF L*SRITDA
Subject  10527  SRLLCDLRNGCFWFRFRYDFFDGLRV*RW*GLLIQTKQFCVHSDIPLPFLRN*SHGFWL*SRITDA  10724

Range 12: 10335 to 10418 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.9 bits(83) 0.0 16/28(57%) 0/28(0%) Plus/Plus
Query       34  HDVHIVCHRVNILWTRFYSLSVCTCSTK  117
                H  + +C  V ILWTRF S SVC CST+
Subject  10335  HVTYTMCVTV*ILWTRFCSSSVCICSTR  10418

Range 13: 10482 to 10547 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
33.1 bits(66) 0.0 13/22(59%) 0/22(0%) Plus/Plus
Query      181  EAHTRFRTRPSVVEVSQPLCDL  246
                E +T+ + RPSVV VS+ LCDL
Subject  10482  ETYTKLQYRPSVVRVSRLLCDL  10547

Range 14: 10342 to 10590 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
111.5 bits(237) 0.0 46/83(55%) 0/83(0%) Minus/Minus
Query       41  KKSCRSLNRKQPFRKDHTTVEKPPPRTVVFETSCALLRKDLITRMISKIKTKVMAKTAWLSKYKHSNCKTWSIRYLHDDTQCV  289
                +KS   +  K     +HTTVEKP PRT     SC  LRKDLITRM+S++KT V+AKTAWLS+Y+HSNC+TWSI  +   T C+
Subject  10342  RKSRTEI*TKNNHFANHTTVEKP*PRTADIGVSCTFLRKDLITRMMSRMKTNVIAKTAWLSRYRHSNCRTWSIISIQ*HTSCM  10590

Range 15: 10526 to 10723 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.3 bits(193) 0.0 41/66(62%) 0/66(0%) Minus/Minus
Query      227  ASVIRLHNRKPCCWSQRTGRGTSEYTRSYFAYMSKLYHPCTRRQLKKSCRSLNRKQPFRKDHTTVE  424
                ASVIRLHN+KPC   +R GRG SE T++ F  MSK YH  TRR  KKS R+LN+KQPFRK H + E
Subject  10526  ASVIRLHNQKPCD*FRRKGRGMSECTQNCFV*MSKPYHLYTRRPSKKSYRNLNQKQPFRKSHNSRE  10723

Grapevine leafroll associated virus 2 isolate GLV2 1050 02 polyprotein (ORF1a), RNA dependent RNA polymerase (ORF1b), 6.3 kDa small hydrophobic protein (ORF2), putative heat shock protein 70 (ORF3), 63 kDa putative cell to cell movemennt protein (ORF4), minor capsid protein (CPm), major capsid protein (CP), 19 kDa protein (ORF7), and 24 kDa protein (ORF8) genes, complete cds

Sequence ID: JX513891.1 Length: 16489 Number of Matches: 15

Range 1: 10525 to 10824 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
228.3 bits(492) 0.0 89/100(89%) 0/100(0%) Plus/Plus
Query      238  CDLYEMVVFGLDFGTTFSTVCVYKDGKVYSYKQNNSAYIPTYLYLFSETNNMVFGYEAESLMHNSKVKGSFFRDLKRWVGCDSSNFGEYFDRLKPRYSVR  537
                C + EMVVFGLDFGTTFSTVCVYKDGKVYS+KQNNSAYIPTYLYLFSETN+MVFGYEAESLMHN+KV+GSFFRDLKRWVGCDSSNF +YFDRLKP Y+VR
Subject  10525  CVICEMVVFGLDFGTTFSTVCVYKDGKVYSFKQNNSAYIPTYLYLFSETNHMVFGYEAESLMHNAKVRGSFFRDLKRWVGCDSSNFSDYFDRLKPHYAVR  10824

Range 2: 10334 to 10531 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
115.6 bits(246) 0.0 52/66(79%) 0/66(0%) Plus/Plus
Query       45  HCVSSCKYLMDQVLQFECLYLLNQAVFAITFVFILLIIRVIKSFRRSAHEVSNTTVRGGGFSTVV*  242
                H V  C  +MDQVLQFECLYLLNQAVFAITFVFILLIIRVIKSFRR+ HE   + VRG GFSTVV*
Subject  10334  HDVCHCIDIMDQVLQFECLYLLNQAVFAITFVFILLIIRVIKSFRRNVHETPISAVRGQGFSTVV*  10531

Range 3: 10302 to 10358 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.3 bits(62) 0.0 11/19(58%) 0/19(0%) Plus/Plus
Query       11  YPQLWCNCMTYTLCVIV*I  67
                +P+LW + +TYT+CV V*I
Subject  10302  FPRLWDDHVTYTMCVTV*I  10358

Range 4: 10536 to 10823 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
183.0 bits(393) 0.0 84/96(88%) 0/96(0%) Minus/Minus
Query      249  RTE*RGFKRSKYSPKLLESQPTQRFKSLKNEPFTFELCISDSAS*PKTMLLVSENR*RYVGIYAELFCLYE*TLPSLYTQTVEKVVPKSKPKTTIS  536
                RT * GF+RSK S KLLESQPTQRFKSLK EP TF LCISDSAS*PKTM LVSE R*RYVG+YAELFCL E*TLPSLYTQTVEKVVPKSKPKTTIS
Subject  10536  RTA*CGFRRSK*SLKLLESQPTQRFKSLKKEPLTFALCISDSAS*PKTM*LVSEKR*RYVGMYAELFCLNE*TLPSLYTQTVEKVVPKSKPKTTIS  10823

Range 5: 10340 to 10534 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
94.1 bits(199) 0.0 40/65(62%) 0/65(0%) Minus/Minus
Query       51  RSHNG*ETSTTDGRVRNLVCASAKRFDHANDQQDKDESYGKNSLVEQVQTLKL*NLVHKIFTR*H  245
                +SHN  ET TTDGR  + V  SA+RF+HAND+Q++DE Y KN LVEQ+QTL+L NLVH I+T  H
Subject  10340  KSHNSRETLTTDGRYWSFVYVSAERFNHANDEQNEDECYCKNRLVEQIQTLELQNLVHNIYTVTH  10534

Range 6: 10304 to 10360 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.8 bits(50) 0.0 11/19(58%) 0/19(0%) Minus/Minus
Query       13  DIYTMTHNVYVMQLHHSCG  69
                +IYT+TH VYV    HS G
Subject  10304  NIYTVTHIVYVT*SSHSRG  10360

Range 7: 10525 to 10827 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
136.2 bits(291) 0.0 57/101(56%) 0/101(0%) Minus/Minus
Query      238  QTNGVARFQAIEVFSKVT*ITTHPTF*VPKERAFYFRVVHQ*FGFITENHVVGLREQVEVRRNIRGVILLI*VNFTILVHADS*KSRAEV*TENNHFVKIT  540
                + N +   QAI+V +KV  + THP F*VPKERA + R++HQ*FGFIT+NHV+   E+VEV RN+R ++L  *VN TI +HAD  KSR E+*T+NNHF   T
Subject  10525  RANRIVWLQAIKVVTKVAGVATHPAF*VPKERASHLRIMHQ*FGFITKNHVISFGEKVEVCRNVRRIVLFE*VNLTIFIHADRRKSRTEI*TKNNHFANHT  10827

Range 8: 10332 to 10535 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.6 bits(174) 0.0 41/68(60%) 0/68(0%) Minus/Minus
Query       43  KITQRLRNLHHGRSCSKPRVRFCEKI*SRE*SAR*RRKLWQKQLG*ASTNTQTVKPGP*DIYTMTHNV  246
                +ITQ+ RN  HGR   + RVRFC KI*SRE* A *RR L QK  G*A T+T+T +PGP* +Y+ TH V
Subject  10332  QITQQSRNPDHGRPILEFRVRFCGKI*SRE**AE*RRMLLQKPPG*ADTDTRTAEPGP*YLYSDTHRV  10535

Range 9: 10532 to 10822 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
125.2 bits(267) 0.0 57/97(59%) 0/97(0%) Plus/Plus
Query      245  FTKWLFSV*TSARLFQLSACTRMVKFTHISKITPRIFRRTSTCSLRPTTWFSVMKPNH*CTTRK*KARSLGT*NVGWVVIQVTLENTSIA*NRATPF  535
                F KWLF V* S RLF+ SAC +MV+FTH +K   R FR TST S +  TWF VMKPNH*C  R+*+A SLGT*N GWV    TL  T IA*+    F
Subject  10532  FAKWLFLV*ISVRLFRRSACIKMVRFTHSNKTILRTFRHTSTFSPKLITWFLVMKPNH*CIMRR*EALSLGT*NAGWVATPATLVTTLIA*SHTMRF  10822

Range 10: 10330 to 10557 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.6 bits(174) 0.0 39/76(51%) 0/76(0%) Plus/Plus
Query       41  YTLCVIV*ISYGPGFTV*VFVLAQPSCFCHNFRLYLADHSRDQIFSQKRTRGFEHDRPWWRFLNRCVIFTKWLFSV  268
                +T CV +   YGPG  V V V AQP  FC+N RL+ A HSRD IF QKRTR     RPW  FL+ CVI    +F +
Subject  10330  HTRCVSLYRYYGPGSAVRVSVSAQPGGFCNNIRLHSAHHSRD*IFPQKRTRNSNIGRPWSGFLDCCVICEMVVFGL  10557

Range 11: 10515 to 10712 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.5 bits(176) 0.0 40/66(61%) 0/66(0%) Plus/Plus
Query      228  STVV*SLRNGCFRFRLRHDFFNCLRVQGW*SLLI*AK*LRVYSDVPLPVL*DQQHGFRL*SRITDA  425
                S ++  LRNGCF FR R+DFF+ LRV  W* LLI  K   V+SD+PLP L +  HGF L*SRITDA
Subject  10515  SRLLCDLRNGCFWFRFRYDFFDGLRV*RW*GLLIQTKQFCVHSDIPLPFLRN*SHGFWL*SRITDA  10712

Range 12: 10323 to 10406 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.9 bits(83) 0.0 16/28(57%) 0/28(0%) Plus/Plus
Query       34  HDVHIVCHRVNILWTRFYSLSVCTCSTK  117
                H  + +C  V ILWTRF S SVC CST+
Subject  10323  HVTYTMCVTV*ILWTRFCSSSVCICSTR  10406

Range 13: 10470 to 10535 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
33.1 bits(66) 0.0 13/22(59%) 0/22(0%) Plus/Plus
Query      181  EAHTRFRTRPSVVEVSQPLCDL  246
                E +T+ + RPSVV VS+ LCDL
Subject  10470  ETYTKLQYRPSVVRVSRLLCDL  10535

Range 14: 10330 to 10578 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
111.5 bits(237) 0.0 46/83(55%) 0/83(0%) Minus/Minus
Query       41  KKSCRSLNRKQPFRKDHTTVEKPPPRTVVFETSCALLRKDLITRMISKIKTKVMAKTAWLSKYKHSNCKTWSIRYLHDDTQCV  289
                +KS   +  K     +HTTVEKP PRT     SC  LRKDLITRM+S++KT V+AKTAWLS+Y+HSNC+TWSI  +   T C+
Subject  10330  RKSRTEI*TKNNHFANHTTVEKP*PRTADIGVSCTFLRKDLITRMMSRMKTNVIAKTAWLSRYRHSNCRTWSIISIQ*HTSCM  10578

Range 15: 10514 to 10711 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.3 bits(193) 0.0 41/66(62%) 0/66(0%) Minus/Minus
Query      227  ASVIRLHNRKPCCWSQRTGRGTSEYTRSYFAYMSKLYHPCTRRQLKKSCRSLNRKQPFRKDHTTVE  424
                ASVIRLHN+KPC   +R GRG SE T++ F  MSK YH  TRR  KKS R+LN+KQPFRK H + E
Subject  10514  ASVIRLHNQKPCD*FRRKGRGMSECTQNCFV*MSKPYHLYTRRPSKKSYRNLNQKQPFRKSHNSRE  10711