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Nucleotide Sequence (345 letters)

Query ID:ds2016-58_76
Query definition:No definition line
Query length:489
Program:TBLASTX 2.2.29+
Database:/save/stheil/db/refseq_vir/viral.genomic.fna

Graphic Summary

Distribution of 1 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
35
70
105
140
175
210
245
280
315
345

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
69.8 103.9 30% 3.23e-16 42% NC_017003
36.8 67.7 21% 1.334e-05 43% NC_028472
43.7 43.7 8% 0.0008071 55% NC_030747
45.5 45.5 8% 0.0002266 59% NC_030861

Alignments

Clitocybe odora virus, complete genome

Sequence ID: Length: 3765 Number of Matches: 2

Range 1: 1826 to 2056 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
69.8 bits(146) 0.0 32/77(42%) 0/77(0%) Minus/Plus
Query       27  GVECGLHKSILSHGGIGIELAKNTFVDGINVSPISFKEIQVSHQDLSAWAAFAKKFDLS*DRQARVLGFGYLARRKS  257
                GVEC L KSI+SH GIG+E AK TF  G NVSP    E+  + +D  A   + K + L       V GFG+  + ++
Subject   1826  GVECNLAKSIMSHRGIGLEFAKKTFFQGFNVSPSPLTEVLAALKDPIALLQYGKIYGLKFVDLLTVAGFGFRVKSRA  2056

Range 2: 1739 to 1816 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.1 bits(68) 0.0 14/26(54%) 0/26(0%) Minus/Plus
Query      266  FSDYAVLGDDLVISH*KIARRYLKIL  343
                F  YAVLGDD+VI   K+A+ Y ++L
Subject   1739  FRAYAVLGDDIVIFDKKVAKYYHRVL  1816

Botrytis cinerea mitovirus 3 RdRp gene for RNA dependent RNA polymerase, isolate HAZ1-3

Sequence ID: Length: 2922 Number of Matches: 2

Range 1: 1835 to 1966 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.8 bits(74) 0.0 19/44(43%) 0/44(0%) Minus/Plus
Query      126  GVECGLHKSILSHGGIGIELAKNTFVDGINVSPISFKEIQVSHQ  257
                GVE  L KSI SH     E AK T     ++SPIS K++  + Q
Subject   1835  GVEINLTKSISSHDRPVFEFAKRTCFGNSDLSPISIKQLLSNDQ  1966

Range 2: 1754 to 1834 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.9 bits(61) 0.0 12/27(44%) 0/27(0%) Minus/Plus
Query      257  DYAVLGDDLVISH*KIARRYLKILDIM  337
                +Y +LGDDLV+    +A +YL+I  I+
Subject   1754  NYEILGDDLVVFDSALADKYLEIAKIL  1834

Alternaria arborescens mitovirus 1 genomic RNA, complete genome

Sequence ID: Length: 2506 Number of Matches: 1

Range 1: 1332 to 1418 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
43.7 bits(89) 0.0 16/29(55%) 0/29(0%) Minus/Plus
Query      257  FSDYAVLGDDLVISH*KIARRYLKILDIM  343
                FSDY +LGDD+VI + K+AR Y+K +D +
Subject   1332  FSDYIILGDDIVIKNDKVARTYIK*MDYL  1418

Fusarium poae mitovirus 1 genomic RNA, complete genome

Sequence ID: Length: 2397 Number of Matches: 1

Range 1: 1321 to 1401 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.5 bits(93) 0.0 16/27(59%) 0/27(0%) Minus/Plus
Query      263  FSDYAVLGDDLVISH*KIARRYLKILD  343
                F  Y +LGDD+VI H KIA+RY+KI++
Subject   1321  FDQYIILGDDIVIKHNKIAKRYIKIME  1401