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Queries

Nucleotide Sequence (302 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 4 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
31
62
93
124
155
186
217
248
279
302

Descriptions

Alignments

Uncultured endornavirus genomic RNA containing putative polyprotein, contig 139Pv1_454_1

Sequence ID: HE579681.1 Length: 4873 Number of Matches: 1

Range 1: 542 to 715 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.6 bits(102) 0.0 18/58(31%) 0/58(0%) Plus/Plus
Query       83  DAVDGKDANLRKRMEDMMLGDTKDALRGFTAKGALDHHNKKIIDSTIRLNTLHTYPIP  256
                D + GK  ++ K +++ ++GD   A++    +G LD HN K+I+  ++ N +  Y IP
Subject    542  DFIFGKSNDIEKVLKNHIIGDVATAIKTQQVRGNLDLHNSKVINQLVKANAMRDYQIP  715

Uncultured endornavirus genomic RNA containing putative polyprotein, contig 63Hv1_454_1

Sequence ID: HE579703.1 Length: 9565 Number of Matches: 1

Range 1: 420 to 593 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.6 bits(102) 0.0 18/58(31%) 0/58(0%) Plus/Plus
Query       83  DAVDGKDANLRKRMEDMMLGDTKDALRGFTAKGALDHHNKKIIDSTIRLNTLHTYPIP  256
                D + GK  ++ K +++ ++GD   A++    +G LD HN K+I+  ++ N +  Y IP
Subject    420  DFIFGKSNDIEKVLKNHIIGDVATAIKTQQVRGNLDLHNSKVINQLVKANAMRDYQIP  593

Uncultured endornavirus genomic RNA containing putative polyprotein, contig 71Pv1_454_1

Sequence ID: HE579706.1 Length: 2072 Number of Matches: 1

Range 1: 559 to 732 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.6 bits(102) 0.0 18/58(31%) 0/58(0%) Plus/Plus
Query       83  DAVDGKDANLRKRMEDMMLGDTKDALRGFTAKGALDHHNKKIIDSTIRLNTLHTYPIP  256
                D + GK  ++ K +++ ++GD   A++    +G LD HN K+I+  ++ N +  Y IP
Subject    559  DFIFGKSNDIEKVLKNHIIGDVATAIKTQQVRGNLDLHNSKVINQLVKANAMRDYQIP  732

Alternaria brassicicola endornavirus isolate 1, complete genome

Sequence ID: KP239989.1 Length: 10290 Number of Matches: 1

Range 1: 1157 to 1330 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.6 bits(102) 0.0 18/58(31%) 0/58(0%) Plus/Plus
Query       83  DAVDGKDANLRKRMEDMMLGDTKDALRGFTAKGALDHHNKKIIDSTIRLNTLHTYPIP  256
                D + GK  ++ K +++ ++GD   A++    +G LD HN K+I+  ++ N +  Y IP
Subject   1157  DFIFGKSNDIEKVLKNHIIGDVATAIKTQQVRGNLDLHNSKVINQLVKANAMRDYQIP  1330

Alternaria brassicicola endornavirus isolate 1, complete genome

Sequence ID: NC_026136.1 Length: 10290 Number of Matches: 1

Range 1: 1157 to 1330 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.6 bits(102) 0.0 18/58(31%) 0/58(0%) Plus/Plus
Query       83  DAVDGKDANLRKRMEDMMLGDTKDALRGFTAKGALDHHNKKIIDSTIRLNTLHTYPIP  256
                D + GK  ++ K +++ ++GD   A++    +G LD HN K+I+  ++ N +  Y IP
Subject   1157  DFIFGKSNDIEKVLKNHIIGDVATAIKTQQVRGNLDLHNSKVINQLVKANAMRDYQIP  1330

Nucleotide Sequence (335 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 4 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
34
68
102
136
170
204
238
272
306
335

Descriptions

Alignments

Uncultured endornavirus genomic RNA containing putative polyprotein, contig 139Pv1_454_1

Sequence ID: HE579681.1 Length: 4873 Number of Matches: 1

Range 1: 2015 to 2179 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 18/55(33%) 0/55(0%) Minus/Plus
Query      110  TADEYKLGPSHINEMLHDITQYEGLAHQIESRIPAAITYHNRNEIKVSWKDQKMD  274
                T DEYK+    ++E+L D++ Y      +  +  AAI+YH +N I  +W  + +D
Subject   2015  TLDEYKMSHVTVSEVLKDVSMYTSGMQSMSKQNNAAISYHGQNRINATWVSKLLD  2179

Uncultured endornavirus genomic RNA containing putative polyprotein, contig 32.1Pv1_454_2

Sequence ID: HE579685.1 Length: 1702 Number of Matches: 1

Range 1: 1203 to 1367 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 18/55(33%) 0/55(0%) Minus/Plus
Query      110  TADEYKLGPSHINEMLHDITQYEGLAHQIESRIPAAITYHNRNEIKVSWKDQKMD  274
                T DEYK+    ++E+L D++ Y      +  +  AAI+YH +N I  +W  + +D
Subject   1203  TLDEYKMSHVTVSEVLKDVSMYTSGMQSMSKQNNAAISYHGQNRINATWVSKLLD  1367

Uncultured endornavirus genomic RNA containing putative polyprotein, contig 63Hv1_454_1

Sequence ID: HE579703.1 Length: 9565 Number of Matches: 1

Range 1: 1893 to 2057 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 18/55(33%) 0/55(0%) Minus/Plus
Query      110  TADEYKLGPSHINEMLHDITQYEGLAHQIESRIPAAITYHNRNEIKVSWKDQKMD  274
                T DEYK+    ++E+L D++ Y      +  +  AAI+YH +N I  +W  + +D
Subject   1893  TLDEYKMSHVTVSEVLKDVSMYTSGMQSMSKQNNAAISYHGQNRINATWVSKLLD  2057

Alternaria brassicicola endornavirus isolate 1, complete genome

Sequence ID: KP239989.1 Length: 10290 Number of Matches: 1

Range 1: 2630 to 2794 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 18/55(33%) 0/55(0%) Minus/Plus
Query      110  TADEYKLGPSHINEMLHDITQYEGLAHQIESRIPAAITYHNRNEIKVSWKDQKMD  274
                T DEYK+    ++E+L D++ Y      +  +  AAI+YH +N I  +W  + +D
Subject   2630  TLDEYKMSHVTVSEVLKDVSMYTSGMQSMSKQNNAAISYHGQNRINATWVSKLLD  2794

Alternaria brassicicola endornavirus isolate 1, complete genome

Sequence ID: NC_026136.1 Length: 10290 Number of Matches: 1

Range 1: 2630 to 2794 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 18/55(33%) 0/55(0%) Minus/Plus
Query      110  TADEYKLGPSHINEMLHDITQYEGLAHQIESRIPAAITYHNRNEIKVSWKDQKMD  274
                T DEYK+    ++E+L D++ Y      +  +  AAI+YH +N I  +W  + +D
Subject   2630  TLDEYKMSHVTVSEVLKDVSMYTSGMQSMSKQNNAAISYHGQNRINATWVSKLLD  2794

Nucleotide Sequence (415 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 4 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
42
84
126
168
210
252
294
336
378
415

Descriptions

Alignments

Uncultured endornavirus genomic RNA containing putative polyprotein, contig 32.1Pv1_454_1

Sequence ID: HE579684.1 Length: 7141 Number of Matches: 2

Range 1: 4848 to 5159 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
94.5 bits(200) 0.0 40/104(38%) 0/104(0%) Plus/Plus
Query       97  ECIVDEIGDRIPTSWVTDAVKQIVMPSFLERHGRSNSMPHLGGKNEILSKYWSRWLGMPSRAPITIDPTWKDVKHNMAFDATAQPKRMTNAFTHVNRDPSIKDT  408
                E +V+EIGD   + +V D VK+++ PS+  RH R+ S    GG  +IL KYWSR LG  S  P+ +  TW DVKHN+      + +  T          +I+DT
Subject   4848  EVLVEEIGDAKTSDYVRDTVKKLLYPSYFRRHARARSNASFGGAVDILGKYWSRLLGARSGNPVQLSETWNDVKHNLPLMVGQENQNSTKQGKKYKAFHTIRDT  5159

Range 2: 4847 to 5074 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.8 bits(111) 0.0 32/76(42%) 0/76(0%) Minus/Minus
Query       96  LCLTSFQVGSIVIGARLGIPNHRLQYLLKISFFPPRCGILLDLPCLSKKLGITICFTASVTQDVGMRSPISSTMHS  323
                LC TSF V     G  L  P++  QYL K+S  PP         CL K LG +  FT S+T    + SPISST  S
Subject   4847  LCFTSFHVSDNCTGLPLLAPSNLDQYLPKMSTAPPNDAFDRARACLRK*LGYSNFFTVSLT*SEVLASPISSTKTS  5074

Uncultured endornavirus genomic RNA containing putative polyprotein, contig 139Pv1_454_2

Sequence ID: HE579682.1 Length: 4542 Number of Matches: 2

Range 1: 2316 to 2546 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.3 bits(193) 0.0 35/77(45%) 0/77(0%) Plus/Plus
Query       97  ECIVDEIGDRIPTSWVTDAVKQIVMPSFLERHGRSNSMPHLGGKNEILSKYWSRWLGMPSRAPITIDPTWKDVKHNM  327
                E +V+EIGD   + +V D VK+++ PS+  RH R+ S    GG  +IL KYWSR LG  S  P+ +  TW +VKHN+
Subject   2316  EVLVEEIGDAKTSDYVRDTVKKLLYPSYFRRHARARSNASFGGAVDILGKYWSRLLGARSGNPVQLSETWNEVKHNL  2546

Range 2: 2315 to 2542 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.6 bits(115) 0.0 33/76(43%) 0/76(0%) Minus/Minus
Query       96  LCLTSFQVGSIVIGARLGIPNHRLQYLLKISFFPPRCGILLDLPCLSKKLGITICFTASVTQDVGMRSPISSTMHS  323
                LC TSF V     G  L  P+   QYL K+S  PP       L CL K LG +  FT S+T    + SPISST  S
Subject   2315  LCFTSFHVSDNCTGLPLLAPSSLDQYLPKMSTAPPNDAFDRALACLRK*LGYSNFFTVSLT*SEVLASPISSTKTS  2542

Uncultured endornavirus genomic RNA containing putative polyprotein, contig 71Pv1_454_2

Sequence ID: HE579707.1 Length: 5637 Number of Matches: 2

Range 1: 3345 to 3575 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.3 bits(193) 0.0 35/77(45%) 0/77(0%) Plus/Plus
Query       97  ECIVDEIGDRIPTSWVTDAVKQIVMPSFLERHGRSNSMPHLGGKNEILSKYWSRWLGMPSRAPITIDPTWKDVKHNM  327
                E +V+EIGD   + +V D VK+++ PS+  RH R+ S    GG  +IL KYWSR LG  S  P+ +  TW +VKHN+
Subject   3345  EVLVEEIGDAKTSDYVRDTVKKLLYPSYFRRHARARSNASFGGAVDILGKYWSRLLGARSGNPVQLSETWNEVKHNL  3575

Range 2: 3344 to 3571 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.6 bits(115) 0.0 33/76(43%) 0/76(0%) Minus/Minus
Query       96  LCLTSFQVGSIVIGARLGIPNHRLQYLLKISFFPPRCGILLDLPCLSKKLGITICFTASVTQDVGMRSPISSTMHS  323
                LC TSF V     G  L  P+   QYL K+S  PP       L CL K LG +  FT S+T    + SPISST  S
Subject   3344  LCFTSFHVSDNCTGLPLLAPSSLDQYLPKMSTAPPNDAFDRALACLRK*LGYSNFFTVSLT*SEVLASPISSTKTS  3571

Alternaria brassicicola endornavirus isolate 1, complete genome

Sequence ID: KP239989.1 Length: 10290 Number of Matches: 1

Range 1: 7988 to 8218 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.0 bits(190) 0.0 34/77(44%) 0/77(0%) Plus/Plus
Query       97  ECIVDEIGDRIPTSWVTDAVKQIVMPSFLERHGRSNSMPHLGGKNEILSKYWSRWLGMPSRAPITIDPTWKDVKHNM  327
                E +V+EIGD   + +V D VK+++ PS+  RH R+ S    GG  +IL KYWSR LG  S  P+ +  TW ++KHN+
Subject   7988  EVLVEEIGDVRTSDYVRDTVKKLLYPSYFRRHARARSNASFGGAVDILGKYWSRLLGARSGNPVQLSETWNEIKHNL  8218

Alternaria brassicicola endornavirus isolate 1, complete genome

Sequence ID: NC_026136.1 Length: 10290 Number of Matches: 1

Range 1: 7988 to 8218 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.0 bits(190) 0.0 34/77(44%) 0/77(0%) Plus/Plus
Query       97  ECIVDEIGDRIPTSWVTDAVKQIVMPSFLERHGRSNSMPHLGGKNEILSKYWSRWLGMPSRAPITIDPTWKDVKHNM  327
                E +V+EIGD   + +V D VK+++ PS+  RH R+ S    GG  +IL KYWSR LG  S  P+ +  TW ++KHN+
Subject   7988  EVLVEEIGDVRTSDYVRDTVKKLLYPSYFRRHARARSNASFGGAVDILGKYWSRLLGARSGNPVQLSETWNEIKHNL  8218

Nucleotide Sequence (306 letters)

Query ID:ds2016-56_135
Query definition:No definition line
Query length:156
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 4 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
31
62
93
124
155
186
217
248
279
306

Descriptions

Alignments

Uncultured endornavirus genomic RNA containing putative polyprotein, contig 32.1Pv1_cloning_1

Sequence ID: HE579686.1 Length: 563 Number of Matches: 1

Range 1: 104 to 364 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
100.0 bits(213) 0.0 37/87(43%) 0/87(0%) Plus/Plus
Query        9  TLDRIRPENHGSMERQVKEWADTRLVLLLKARYSDNNEIDATAEDWFINRDQSLFSQVKLPSEARIKHTLPIMQQTRQNITDIGHAP  269
                T ++I P NH  ME  +  WA+TRL L L+    D+NE ++TA DWF+N DQ+ ++++KLP+    K  LP+    +Q++T +GHAP
Subject    104  TGEKISPPNHAEMETMIDSWAETRLRLSLRMGTYDSNEPNSTAIDWFLNTDQTAYNEIKLPTNGSTKSRLPVYDNAKQHVTVVGHAP  364

Alternaria brassicicola endornavirus isolate 1, complete genome

Sequence ID: KP239989.1 Length: 10290 Number of Matches: 1

Range 1: 8669 to 8929 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
100.0 bits(213) 0.0 39/87(45%) 0/87(0%) Plus/Plus
Query        9  TLDRIRPENHGSMERQVKEWADTRLVLLLKARYSDNNEIDATAEDWFINRDQSLFSQVKLPSEARIKHTLPIMQQTRQNITDIGHAP  269
                T ++I P NH  ME  +  WA+TRL L L+    D+NE +ATA DWF+N DQ+ ++++KLP+    K  LP+    +Q++T IGHAP
Subject   8669  TGEKIGPSNHDEMETMIDLWAETRLRLSLRMGTYDSNEPNATAIDWFLNTDQTAYNEIKLPTNGSTKSRLPVYDNVKQHVTVIGHAP  8929

Alternaria brassicicola endornavirus isolate 1, complete genome

Sequence ID: NC_026136.1 Length: 10290 Number of Matches: 1

Range 1: 8669 to 8929 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
100.0 bits(213) 0.0 39/87(45%) 0/87(0%) Plus/Plus
Query        9  TLDRIRPENHGSMERQVKEWADTRLVLLLKARYSDNNEIDATAEDWFINRDQSLFSQVKLPSEARIKHTLPIMQQTRQNITDIGHAP  269
                T ++I P NH  ME  +  WA+TRL L L+    D+NE +ATA DWF+N DQ+ ++++KLP+    K  LP+    +Q++T IGHAP
Subject   8669  TGEKIGPSNHDEMETMIDLWAETRLRLSLRMGTYDSNEPNATAIDWFLNTDQTAYNEIKLPTNGSTKSRLPVYDNVKQHVTVIGHAP  8929

Uncultured endornavirus genomic RNA containing putative polyprotein, contig 71Pv1_454_2

Sequence ID: HE579707.1 Length: 5637 Number of Matches: 1

Range 1: 4026 to 4286 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
97.8 bits(208) 0.0 36/87(41%) 0/87(0%) Plus/Plus
Query        9  TLDRIRPENHGSMERQVKEWADTRLVLLLKARYSDNNEIDATAEDWFINRDQSLFSQVKLPSEARIKHTLPIMQQTRQNITDIGHAP  269
                T ++I P NH  ME  +  WA+TRL   L+    D+NE ++TA DWF+N DQ+ ++++KLP+    K  LP+    +Q++T +GHAP
Subject   4026  TGEKISPSNHDEMETMIDSWAETRLRFSLRMGTYDSNEPNSTAIDWFLNTDQTAYNEIKLPTNGSSKSRLPVYDNAKQHVTVVGHAP  4286

Uncultured endornavirus genomic RNA containing putative polyprotein, contig 63Hv1_454_1

Sequence ID: HE579703.1 Length: 9565 Number of Matches: 2

Range 1: 7933 to 8151 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
81.3 bits(172) 0.0 31/73(42%) 0/73(0%) Plus/Plus
Query        9  TLDRIRPENHGSMERQVKEWADTRLVLLLKARYSDNNEIDATAEDWFINRDQSLFSQVKLPSEARIKHTLPIM  227
                T ++I P NH  ME  +  WA+TRL L L+    D+NE ++TA DWF+N DQ+ ++++KLP+     H  P M
Subject   7933  TGEKISPSNHDEMETMIDSWAETRLRLSLRMGTYDSNEPNSTAIDWFLNTDQTAYNEIKLPTNGSPSHACPCM  8151

Range 2: 8130 to 8192 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.9 bits(57) 0.0 9/21(43%) 0/21(0%) Plus/Plus
Query      207  KHTLPIMQQTRQNITDIGHAP  269
                K  LP+    +Q++T +GHAP
Subject   8130  KSRLPVYDNAKQHVTVVGHAP  8192