Nucleotide Sequence (468 letters)
Query ID: | ds2016-121_19 |
Query definition: | No definition line |
Query length: | 287 |
Program: | TBLASTX 2.2.29+ |
Database: | /save/stheil/db/refseq_vir/viral.genomic.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
153.0 | 609.1 | 28% | 3.014e-61 | 42% | NC_015494 | |
50.0 | 171.8 | 25% | 7.85e-26 | 41% | NC_010343 | |
51.9 | 173.6 | 22% | 2.31e-26 | 47% | NC_009519 | |
50.5 | 169.5 | 22% | 3.613e-25 | 41% | NC_010346 | |
48.7 | 164.5 | 22% | 1.037e-23 | 50% | NC_024014 |
Alignments
Range 1: 278 to 589 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
153.0 bits(328) | 0.0 | 66/104(63%) | 0/104(0%) | Minus/Plus |
Query 152 GWARSFYTLEGHLESIALFNKPLIPEPIDETWTRVKALTHRKISTMFPPVTSLDFETDLDLVPFESSSAAGYGYLGKKGEGDNLNRAKKTANAAVRQFDEGIEN 463 GWARSFYT+EG + SI F+KPLI EP D W VK T KI ++FP V SL FE D VPFESSS+AGYGY GKKGEG+N +RAK ANAAVR+F E I+N Subject 278 GWARSFYTVEGIMASIMQFSKPLIHEPTDPIWNDVKRETLMKIGSLFPQVQSLPFEGGFDHVPFESSSSAGYGYDGKKGEGNNFHRAKSIANAAVRKFSEDIDN 589
Range 2: 590 to 745 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
102.7 bits(218) | 0.0 | 43/52(83%) | 0/52(0%) | Minus/Plus |
Query 2 ENYDSAVSHIIENSTPDVAFTRTQLAKLPSIKVRIVFGEAFHYILIEGLSAA 157 + YD AVSH+I+ TPD+AFTRTQLAKLPSIKVRIVFGEAFH ILIEGLSAA Subject 590 QGYDYAVSHLIQQGTPDIAFTRTQLAKLPSIKVRIVFGEAFHNILIEGLSAA 745
Range 3: 277 to 486 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
82.6 bits(174) | 0.0 | 40/70(57%) | 0/70(0%) | Plus/Minus |
Query 255 AAELDSNGTRSKSVSKSSDVTGGNIVEIFLCVRALTLVHVSSIGSGMSGLLNNAIDSRCPSSV*NDRAHP 464 A ELDSNGT SK S +D T GN + IF+ V LT H+ S+GS MSGLLN ID+ PS+V* D AHP Subject 277 ADELDSNGTWSKPPSNGND*TCGNKLPIFISVSLLTSFHIGSVGS*MSGLLNCIIDAIMPSTV*KDLAHP 486
Range 4: 595 to 744 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
59.7 bits(124) | 0.0 | 33/50(66%) | 0/50(0%) | Plus/Minus |
Query 3 AAESPSIRI**NASPKTILTLIEGSLAN*VLVKATSGVLFSMM*LTAES* 152 AA+SPSI++ *NASPKTI TLI+GS A+ V VKA SGV M LTA S* Subject 595 AADSPSIKML*NASPKTIRTLIDGSFASCVRVKAISGVPCCMRWLTA*S* 744
Range 5: 532 to 585 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
26.7 bits(52) | 0.0 | 12/18(67%) | 0/18(0%) | Plus/Minus |
Query 156 SIPSSNCRTAAFAVFLAR 209 SI S N RTAAFA+ AR Subject 532 SISSLNLRTAAFAMLFAR 585
Range 6: 596 to 721 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.7 bits(113) | 0.0 | 21/42(50%) | 0/42(0%) | Plus/Minus |
Query 26 NIMKCLAKDNPNFNRGKFS*LSSCKSNIWCAILDDVTHC*II 151 N++KCL+KDNPNFNR *L S +SNIW +L ++ C ++ Subject 596 NVVKCLSKDNPNFNRW*LR*LCSRESNIWRTLLYEMADCVVV 721
Range 7: 332 to 487 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
39.1 bits(79) | 0.0 | 22/52(42%) | 0/52(0%) | Plus/Minus |
Query 254 GC*A*FEWH*V*ICLEV**CYRWEHR*DFPVC*SLNSCPCLINWFWNEWFVK 409 G *A F+W V + ** WE C SLN P I WF NEWF + Subject 332 G**ARFKWDVVKTSFKW**LNLWEQTTYLH*CFSLNVVPYWIGWFMNEWFAE 487
Range 8: 280 to 477 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
49.2 bits(101) | 0.0 | 29/66(44%) | 0/66(0%) | Minus/Plus |
Query 264 MGTIILHTRRTPRINSVV*QTTHSRTN**DMDKS*GSNTQENLNDVPTGNITRLRDRFRPSAIRIK 461 MG I+LH+RR I + QTTHS TN +M++ * NT E+ VPT +I + RF P I I+ Subject 280 MG*ILLHSRRHYGIYYAIQQTTHS*TNRSNMERR*ERNTNEDR*FVPTSSIITI*RRF*PRPI*IE 477
Raphanus sativus cryptic virus 2 segment 1, complete sequence
Range 1: 335 to 451 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
50.0 bits(103) | 0.0 | 16/39(41%) | 0/39(0%) | Minus/Plus |
Query 347 GWARSFYTLEGHLESIALFNKPLIPEPIDETWTRVKALT 463 GWARS Y+L+ H+++I + + +PEP D+ W + K T Subject 335 GWARSVYSLDQHVDAILAYRRQKLPEPTDDVWNQTKQHT 451
Range 2: 506 to 625 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
49.6 bits(102) | 0.0 | 20/40(50%) | 0/40(0%) | Minus/Plus |
Query 167 DLVPFESSSAAGYGYLGKKGEGDNLNRAKKTANAAVRQFD 286 D V + SSS+AGYGY+G KG+GDN +A++TA + D Subject 506 DEVKWISSSSAGYGYVGHKGDGDNYLKARRTAVTIAEKLD 625
Fragaria chiloensis cryptic virus RNA 1, complete genome
Range 1: 339 to 434 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.9 bits(107) | 0.0 | 15/32(47%) | 0/32(0%) | Minus/Plus |
Query 368 GWARSFYTLEGHLESIALFNKPLIPEPIDETW 463 GWARS+YTL+ H++SI +++P +P+P + W Subject 339 GWARSYYTLQAHIDSIMQYDRPKLPQPTNAAW 434
Range 2: 507 to 605 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.7 bits(100) | 0.0 | 20/33(61%) | 0/33(0%) | Minus/Plus |
Query 191 LDLVPFESSSAAGYGYLGKKGEGDNLNRAKKTA 289 LD V + SSAAGYGY+G+K + DN RA+KTA Subject 507 LDQVKWVRSSAAGYGYVGRKSDNDNYFRARKTA 605
Range 1: 507 to 605 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
50.5 bits(104) | 0.0 | 21/33(64%) | 0/33(0%) | Minus/Plus |
Query 191 LDLVPFESSSAAGYGYLGKKGEGDNLNRAKKTA 289 LD V + SSAAGYGY G+K +GDN RA+KTA Subject 507 LDQVKWVRSSAAGYGYTGRKSDGDNYIRARKTA 605
Range 2: 339 to 434 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
45.5 bits(93) | 0.0 | 13/32(41%) | 0/32(0%) | Minus/Plus |
Query 368 GWARSFYTLEGHLESIALFNKPLIPEPIDETW 463 GWARS+YTL+ H++S+ +++P + P + W Subject 339 GWARSYYTLQAHVDSLMQYDRPKLQPPTNTAW 434
Arhar cryptic virus-I segment RNA-1, strain Hyderabad
Range 1: 335 to 430 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.7 bits(100) | 0.0 | 16/32(50%) | 0/32(0%) | Minus/Plus |
Query 368 GWARSFYTLEGHLESIALFNKPLIPEPIDETW 463 GWARS+YTLE HL +I +++P + +P D W Subject 335 GWARSYYTLETHLNAIMNYDRPKLSQPSDAAW 430
Range 2: 503 to 601 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
41.3 bits(84) | 0.0 | 18/33(55%) | 0/33(0%) | Minus/Plus |
Query 191 LDLVPFESSSAAGYGYLGKKGEGDNLNRAKKTA 289 LD V + SSAAGYGY+G K + N RA+ TA Subject 503 LDKVKWVRSSAAGYGYVGLKSDPGNYERARTTA 601