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Queries

Nucleotide Sequence (951 letters)

Query ID:ds2016-132_4
Query definition:No definition line
Query length:951
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 16 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
96
192
288
384
480
576
672
768
864
951

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome

Sequence ID: KR054734.1 Length: 8753 Number of Matches: 11

Range 1: 1195 to 2133 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
709.0 bits(1541) 0.0 299/313(96%) 0/313(0%) Minus/Plus
Query        3  SLLMPNISKLVMSFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLIDITPDFFEHLFLFSCLNELIAEDIEEVMDGSWFGLGNLHFNRQRAPYSLGVSHWINSPFSVEHKFAGVINHQILYVALSLVPLSDDPSFKLTSREVDSALSSVRMALGVTGQSKLFGFLVNNTFINEVQRGYKLRLAQHLKSLTWLFHFCGCQWFLLCRRTNLKFLSDRKSSFADLDCGVAKIYSLVSAQAIAPGVLSGLTKVYSFGSNSQQKLISSNVLEGKLCESVQSPNAHFGETLVSHDQEGKVVTSTPHTSQLLDA  941
                SLLMPNISKLV+SFLCRMMPNALARLSSSFRETSLDSFV+ALEPFNFSVNLIDITPDFFEHLFLFSCLNELIAEDIEE MDGSWFGLGNLHFNRQRAPYSLGVSHWI SPFSVEHKFAGVIN QILYVALSLVPLSDDPSFKLTSREVDSALSSVR ALGVTGQSKLFGFLVNNT  NEVQRGYKLRLAQHLKSLTWLFHFCGCQWFLLCRR NLKFLSDRKSSFAD DCGVAKIYSLV+AQAIAP VLSGLTKVYSFGSNSQQKLISSN+LEG LCESVQSPNAHFGETLVSHDQEGKVVTSTPHTSQLLDA
Subject   1195  SLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVHALEPFNFSVNLIDITPDFFEHLFLFSCLNELIAEDIEEAMDGSWFGLGNLHFNRQRAPYSLGVSHWIKSPFSVEHKFAGVINRQILYVALSLVPLSDDPSFKLTSREVDSALSSVRKALGVTGQSKLFGFLVNNTLTNEVQRGYKLRLAQHLKSLTWLFHFCGCQWFLLCRRINLKFLSDRKSSFADPDCGVAKIYSLVTAQAIAPEVLSGLTKVYSFGSNSQQKLISSNILEGNLCESVQSPNAHFGETLVSHDQEGKVVTSTPHTSQLLDA  2133

Range 2: 1194 to 2135 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
656.3 bits(1426) 0.0 286/314(91%) 0/314(0%) Minus/Plus
Query        1  FSIDA*YFKAGNVIFVSNDA*CLSQVVFKFPRNFT*LICLCS*AFQLLC*LDRYYP*LL*ASIFVLLPQ*ADCRGY*GSYGRLMVWTWQFAL*SSEGSIFPRGVTLDQLSILC*AQVCRCH*PPNSVCCSVLGPIVR*SFF*VDF*GS*FRSFKCKNGSWGYRAVKAFWLLSE*HFHK*GAERV*VKACSTLEITDLALSFLWLSMVSSVPKNQPQISK*PKVLLC*P*LWCC*NL*LGFSSGYRPWGFVRLN*GIFFWLQFSTEAHLFECS*RQVV*ISAVPQRTLWRNPS*SRSRGKSCNKYPSHFTIARCK  942
                FSIDA*YFKAG++IFVSNDA*CLSQVVFKFPRNFT*LIC CS*AFQL C*LD YYP* L*ASIFVLLPQ*ADCRGY*GSYGRLMVWTWQFAL* SEG IFPRGVTLDQ+SILC*AQVCRCH*PPNSVCCSVLGPIVR*SFF*VDF*GS*FRSFKCK GSWGYRA+KAFWLLSE*H HK*GAERV*VKACSTLEIT LALSFLWLSMVSSV KNQP ISK* KVLLC*P*LWCC*NL* G+SSG+RP GFVRLN*G+FFWLQFSTEAHLF+ S*R  V*ISAVPQRTLWRNPS SRSRG+SC+KYPSHFTIARCK
Subject   1194  FSIDA*YFKAGDIIFVSNDA*CLSQVVFKFPRNFT*LICSCS*AFQLFC*LD*YYP*FL*ASIFVLLPQ*ADCRGY*GSYGRLMVWTWQFAL*PSEGPIFPRGVTLDQISILC*AQVCRCH*PPNSVCCSVLGPIVR*SFF*VDF*GS*FRSFKCKKGSWGYRAIKAFWLLSE*HSHK*GAERV*VKACSTLEITYLALSFLWLSMVSSVSKNQP*ISK*SKVLLC*P*LWCC*NL*FGYSSGHRP*GFVRLN*GLFFWLQFSTEAHLFKYS*R*FV*ISAVPQRTLWRNPSQSRSRGESCDKYPSHFTIARCK  2135

Range 3: 1192 to 2133 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
632.0 bits(1373) 0.0 283/314(90%) 0/314(0%) Plus/Minus
Query        3  CIEQL*SVRGTCYNFSLLIVTN*GFSKVCVGGLH*FTQLAFKNIRRDELLLRIGAKRIYLS*A*QNPRGDSLS*NQAIDFSNTTIKVSKGGLSVT*KFEVGSSAQKKPLTTTEMKEPSQ*FQVLSKP*LIPSLHLIYESVIH*EAKKL*LPCNPKSHSYT*KSGINFPRSQLKRRII*QWDQGQSNIQNLVVNDTCKLVLNREWRVDPV*HP*GIWSPLTIKVQIAKSKP*AVHNFLNILCNQLIEAGEQK*MLKEVRGNIDQVNREVERLKSIDK*VK*SFAET*RQPG*GIRHHSTQK*HYQL*NIRHQ*RT  944
                CIEQL*SVRGTC+NF LLIVT+*GFSKVCVGGLH*FTQ+ FKNI RDELLLRIGAKRI LS*A*QN RGD LS NQ IDFSNTTI+VSKGGLS+T*KF+V SS QKKPLTTTEMKEPS+*FQVLSKP*LIPSLHLI ESVIH*EAKKL*LPCNPKS SYT*KSGINFPRSQLKRRII*QWDQGQSNIQNL VNDTCKLVLNREWR DPV*HP*GIW PLT+KVQIAKSKP*AVH+FLNILCNQLIEAGEQK*MLKE+RGNI+QVNR+VERLKS++K*VK*SFAET*RQPG*GIRHHSTQK*++QL*NIRHQ*RT
Subject   1192  CIEQL*SVRGTCHNFPLLIVTD*GFSKVCVGGLH*FTQITFKNI*RDELLLRIGAKRIDLS*A*QNLRGDGLSCNQTIDFSNTTIRVSKGGLSIT*KFKVDSSTQKKPLTTTEMKEPSK*FQVLSKP*LIPSLHLICESVIH*EAKKL*LPCNPKSLSYT*KSGINFPRSQLKRRII*QWDQGQSNIQNLAVNDTCKLVLNREWRFDPV*HP*GIWGPLTVKVQIAKSKP*AVHSFLNILCNQLIEAGEQK*MLKEIRGNINQVNRKVERLKSMNK*VK*SFAET*RQPG*GIRHHSTQK*YHQL*NIRHQ*RT  2133

Range 4: 1373 to 2134 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
531.2 bits(1153) 0.0 235/254(93%) 0/254(0%) Plus/Minus
Query        2  LHRAIVKCEGYLLQLFPLDRD*LGFLQSVRWGTALIHTTCLQEHSKR*ASVENWSQKNIP*LSLTKPQGR*PELKPSYRF*QHHNQGQQRRTFGHLEI*GWFFGTEETIDNHRNERAKSVISSVEQALTYTLSAPHL*KCYSLRSQKALTAL*PQEPFLHLKERNQLP*KST*KKDHLTMGPRTEQHTEFGG**HLQTCAQQRMES*SSVTPLGNMEPSDD*SANCQVQTMSRP*LPQYPLQSAH*GRRTKIDA  763
                LHRAIVKCEGYL QL PLDRD*LGFLQSVRWGTALIHT  LQE+ KR*ASVENWSQKN P*LSLTKPQGR PEL P+YRF*QHHNQGQQRRTF HLEI*G FF TEETIDNHRNERAK VISSVEQALTYTLSAPHL*+CYSLRSQKAL AL*PQEPFLHLKERNQLP*KST*KKDHLTMGPRTEQHTEFGG**HLQTCAQQRME *SSVTPLGNM PSD *SANCQVQTMSRP*LPQYPLQSAH*GRRTKIDA
Subject   1373  LHRAIVKCEGYLSQLSPLDRD*LGFLQSVRWGTALIHTNYLQEYLKR*ASVENWSQKNRP*LSLTKPQGRWPEL*PNYRF*QHHNQGQQRRTFDHLEI*G*FFDTEETIDNHRNERAK*VISSVEQALTYTLSAPHL*ECYSLRSQKALIAL*PQEPFLHLKERNQLP*KST*KKDHLTMGPRTEQHTEFGG**HLQTCAQQRMEI*SSVTPLGNMGPSDG*SANCQVQTMSRP*LPQYPLQSAH*GRRTKIDA  2134

Range 5: 1193 to 1330 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
99.1 bits(210) 0.0 43/46(93%) 0/46(0%) Plus/Minus
Query      806  *KAQEHRQMSQVKFRGNLKTTWLRH*ASFDTKMTLPALKY*ASIEN  943
                *KAQEH QMSQVKFRGNLKTTWLRH*ASFDTKM  PALKY*ASIEN
Subject   1193  *KAQEHEQMSQVKFRGNLKTTWLRH*ASFDTKMISPALKY*ASIEN  1330

Range 6: 1194 to 1805 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
435.0 bits(943) 0.0 198/204(97%) 0/204(0%) Plus/Minus
Query      331  QPQK*KSQVSDFKC*ASLNLYPLCTSFMKVLFTKKPKSFDCPVTPRAILTLERAESTSLEVNLKEGSSDNGTKDRATYRIWWLMTPANLCSTENGELIQCDTPREYGAL*RLKCKLPSPNHEPXXXXXXXXXXXXLRQENKNRCSKKSGVISIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINRE  942
                QPQK*KSQVSDFKC*ASLNLYPLCTSF++VLFTKKPKSFDCPVTPRA LTLERAESTSLEVNLKEGSSDNGTKDRATYRIW LMTPANLCSTENG+LIQCDTPREYGAL*RLKCKLPSPNHEPSI SSISSAISSLRQENKNRCSKKSGVISIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINRE
Subject   1194  QPQK*KSQVSDFKC*ASLNLYPLCTSFVRVLFTKKPKSFDCPVTPRAFLTLERAESTSLEVNLKEGSSDNGTKDRATYRIWRLMTPANLCSTENGDLIQCDTPREYGAL*RLKCKLPSPNHEPSIASSISSAISSLRQENKNRCSKKSGVISIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINRE  1805

Range 7: 1857 to 2135 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
189.8 bits(408) 0.0 86/93(92%) 0/93(0%) Plus/Minus
Query        1  LASSNCEV*GVLVTTFPS*S*LTRVSPKCALGDCTDSHNLPSRTFEEMSFC*ELEPKEYTLVKPDKTPGAIA*AETKL*ILATPQSRSAKEDF  279
                LASSNCEV*GVLVTTFPS*S*LTRVSPKCALGDCTDSH LPSR FEEMSFC*ELEPKE TLVKPDKT GA+A*A TKL*ILATPQS SAKEDF
Subject   1857  LASSNCEV*GVLVTTFPS*S*LTRVSPKCALGDCTDSHKLPSRIFEEMSFC*ELEPKE*TLVKPDKTSGAMA*AVTKL*ILATPQSGSAKEDF  2135

Range 8: 1649 to 2134 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
309.9 bits(670) 0.0 143/162(88%) 0/162(0%) Minus/Plus
Query        2  FQV*EWLLGLQGSQSFLAS**ITLS*MRCREGIS*GLLNT*NH*LGSFISVVVNGFFCAEEPTSNF*VTESPPLLTLIVVLLKSIAWFQLRLSPLGFCQA*LRYILLAPILNRSSSLRMFLKASCVNQCSPPTHTLEKP*LVTIKREKL*QVPLTLHNCSMQ  487
                FQV*E LLGLQG+QSFLAS**ITLS MRCREGIS*GLLNT*NH LGSFISVVVNGFFC EE T NF*V ESPPLLTLIVVLLKSI W QLR SPL FCQA*LR ILLAPILNRSSSL++FLK  CVNQCSPPTHTLEKP* VTIKR KL*QVPLTLHNCSMQ
Subject   1649  FQV*ERLLGLQGNQSFLAS**ITLSQMRCREGIS*GLLNT*NHLLGSFISVVVNGFFCVEESTLNF*VIESPPLLTLIVVLLKSIVWLQLRPSPLRFCQA*LRSILLAPILNRSSSLQIFLKVICVNQCSPPTHTLEKP*SVTIKRGKL*QVPLTLHNCSMQ  2134

Range 9: 1376 to 1507 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
103.2 bits(219) 0.0 42/44(95%) 0/44(0%) Minus/Plus
Query      629  IYFCSPASMS*LQRILRKLWTAHGLDLAICTLIVRGLHIP*GCH  760
                IYFCSPASMS*LQRILRKLWTAHGLDLAICTL VRG HIP*GCH
Subject   1376  IYFCSPASMS*LQRILRKLWTAHGLDLAICTLTVRGPHIP*GCH  1507

Range 10: 1193 to 1291 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.5 bits(165) 0.0 32/33(97%) 0/33(0%) Minus/Plus
Query      845  VLY*CLIFQSW*CHFCVE*CLMP*PGCLQVSAK  943
                VLY*CLIFQSW* HFCVE*CLMP*PGCLQVSAK
Subject   1193  VLY*CLIFQSW*YHFCVE*CLMP*PGCLQVSAK  1291

Range 11: 1565 to 1609 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.4 bits(95) 0.0 15/15(100%) 0/15(0%) Minus/Plus
Query      527  KFCMLLCPWSHCQMI  571
                KFCMLLCPWSHCQMI
Subject   1565  KFCMLLCPWSHCQMI  1609

Grapevine rupestris stem pitting associated virus isolate VF1, partial genome

Sequence ID: KT948710.1 Length: 8716 Number of Matches: 11

Range 1: 1196 to 2125 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
599.0 bits(1301) 0.0 255/310(82%) 0/310(0%) Minus/Plus
Query       12  SLLMPNISKLVMSFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLIDITPDFFEHLFLFSCLNELIAEDIEEVMDGSWFGLGNLHFNRQRAPYSLGVSHWINSPFSVEHKFAGVINHQILYVALSLVPLSDDPSFKLTSREVDSALSSVRMALGVTGQSKLFGFLVNNTFINEVQRGYKLRLAQHLKSLTWLFHFCGCQWFLLCRRTNLKFLSDRKSSFADLDCGVAKIYSLVSAQAIAPGVLSGLTKVYSFGSNSQQKLISSNVLEGKLCESVQSPNAHFGETLVSHDQEGKVVTSTPHTSQL  941
                SLLMPNISKLV+SFLCRMMPN LARLSSSFRETSLDSFVYALEPFNFSVNLID+TPDFFEHLFLFSC NELI EDIEEVMD SWFGLGN++FNRQRAPYSLGVSHW+NSPFSVE KFAG INHQIL+VAL+LVPL +DPSFKL  REVDS LSSVRMALG+TGQS+LFGFLVN+T INE+QR YKLRLAQHLKSLTW FHFCGCQWFLL RR NLKFL DRKSSFADLDC V +IY LVSAQA APGVL GLTKVY   SN+QQ+L S N LEGK  ESVQ  +A FGETLVS+DQE  V TST H  QL
Subject   1196  SLLMPNISKLVISFLCRMMPNVLARLSSSFRETSLDSFVYALEPFNFSVNLIDVTPDFFEHLFLFSCRNELIEEDIEEVMDSSWFGLGNVYFNRQRAPYSLGVSHWLNSPFSVESKFAGAINHQILHVALALVPLPNDPSFKLAPREVDSVLSSVRMALGITGQSRLFGFLVNDTLINELQRRYKLRLAQHLKSLTWYFHFCGCQWFLLNRRNNLKFLGDRKSSFADLDCNVTQIYRLVSAQATAPGVLLGLTKVYVCCSNTQQRLNSLNALEGKSSESVQPSDACFGETLVSNDQERDVETSTSHVPQL  2125

Range 2: 1195 to 1806 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
365.3 bits(791) 0.0 172/204(84%) 0/204(0%) Plus/Minus
Query      331  QPQK*KSQVSDFKC*ASLNLYPLCTSFMKVLFTKKPKSFDCPVTPRAILTLERAESTSLEVNLKEGSSDNGTKDRATYRIWWLMTPANLCSTENGELIQCDTPREYGAL*RLKCKLPSPNHEPXXXXXXXXXXXXLRQENKNRCSKKSGVISIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINRE  942
                QPQK*K QVSDFKC ASLNLY LC SFM+V FTKKPKS DCPV PRAILTLER ESTSL  +LKEGS   GTK RAT +IWWLM PANL STENGEL QCDTP EYGAL*RLK  LPSPNHE SITSS+SS+ISSLRQENKNRCSKKSGV SIKLTEKLKGSRA*TNESSEVSRKLED+LA+ LGIIRHKNDITSFE+LGINRE
Subject   1195  QPQK*KYQVSDFKCCASLNLYLLCNSFMRVSFTKKPKSLDCPVIPRAILTLERTESTSLGASLKEGSFGKGTKARATCKIWWLMAPANLLSTENGELSQCDTPSEYGAL*RLKYTLPSPNHELSITSSMSSSISSLRQENKNRCSKKSGVTSIKLTEKLKGSRA*TNESSEVSRKLEDSLARTLGIIRHKNDITSFEMLGINRE  1806

Range 3: 1858 to 2124 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
117.9 bits(251) 0.0 59/89(66%) 0/89(0%) Plus/Minus
Query       13  NCEV*GVLVTTFPS*S*LTRVSPKCALGDCTDSHNLPSRTFEEMSFC*ELEPKEYTLVKPDKTPGAIA*AETKL*ILATPQSRSAKEDF  279
                NC  * VLV+T  S S LTRVSPK A   CTDS +LPSR F+E+S C* LE +  TLVKP+KTPGA+A*AET+ *I  T QSRSAKEDF
Subject   1858  NCGT*EVLVSTSLSWSLLTRVSPKHASEGCTDSLDLPSRAFKELSLC*VLEQQT*TLVKPNKTPGAVA*AETRR*IWVTLQSRSAKEDF  2124

Range 4: 1193 to 2131 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
454.7 bits(986) 0.0 212/313(68%) 0/313(0%) Plus/Minus
Query        6  IEQL*SVRGTCYNFSLLIVTN*GFSKVCVGGLH*FTQLAFKNIRRDELLLRIGAKRIYLS*A*QNPRGDSLS*NQAIDFSNTTIKVSKGGLSVT*KFEVGSSAQKKPLTTTEMKEPSQ*FQVLSKP*LIPSLHLIYESVIH*EAKKL*LPCNPKSHSYT*KSGINFPRSQLKRRII*QWDQGQSNIQNLVVNDTCKLVLNREWRVDPV*HP*GIWSPLTIKVQIAKSKP*AVHNFLNILCNQLIEAGEQK*MLKEVRGNIDQVNREVERLKSIDK*VK*SFAET*RQPG*GIRHHSTQK*HYQL*NIRHQ*RT  944
                I QL ++RGTC+N  LL++ N*  SK C+ GLH*FT LAFK+++  + LL +GA  I LS*   N RG  LS*NQ I+  N  IKVSKGGLS+  KFEV SS Q+KPL TTEMK PS+*FQVL K  LIPSL LIYE VIH*+AKK  LPC+PKSHS+ *K+GINFPR  L+ RII Q DQGQSN+QNLVV+ TCKL LNREWRV P+*+P* IWSPLT+KV IA SKP* +H  LN+L NQLI AGEQK*+LKE+RG+I QVN E+ER KSIDK*+K*SF ET*RQPG* I HHSTQK*++QL*N+ HQ* T
Subject   1193  IRQLWNMRGTCFNIPLLVIAN*SLSKACI*GLH*FT*LAFKSVQGVKSLLSVGATNIDLS*TQ*NSRGCGLS*NQTINLGNIAIKVSKGGLSIAQKFEVVSSVQEKPLATTEMKIPSE*FQVLCKSQLIPSLQLIYEGVIH*KAKKPRLPCDPKSHSHA*KNGINFPRG*LEGRIIWQRDQGQSNMQNLVVDGTCKLALNREWRVKPM*YP**IWSPLTVKVHIA*SKP*TIHYLLNVLLNQLIAAGEQK*VLKEIRGHIYQVN*EIERFKSIDK*IK*SFTET*RQPG*DIGHHSTQK*YHQL*NVGHQ*GT  2131

Range 5: 1195 to 2136 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
407.5 bits(883) 0.0 202/314(64%) 0/314(0%) Minus/Plus
Query        1  FSIDA*YFKAGNVIFVSNDA*CLSQVVFKFPRNFT*LICLCS*AFQLLC*LDRYYP*LL*ASIFVLLPQ*ADCRGY*GSYGRLMVWTWQFAL*SSEGSIFPRGVTLDQLSILC*AQVCRCH*PPNSVCCSVLGPIVR*SFF*VDF*GS*FRSFKCKNGSWGYRAVKAFWLLSE*HFHK*GAERV*VKACSTLEITDLALSFLWLSMVSSVPKNQPQISK*PKVLLC*P*LWCC*NL*LGFSSGYRPWGFVRLN*GIFFWLQFSTEAHLFECS*RQVV*ISAVPQRTLWRNPS*SRSRGKSCNKYPSHFTIARCK  942
                F IDA +FKAG++IFVSNDA C SQ VFKFP NFT* ICLCS* FQ L *LDR  P* L*A IFVLLPQ*AD  G+*G  G  MVWT Q  L* SEGSIF RG+TL  LSILC* QVCRCH PPN  CCS LGP  +*SF     *GS*FRSFK +NGSW +RA+ AFWL SE*H HK* AE+V*V+ C+ LEIT L  SFLWL +VS  PK QPQI    KVLLC*P*L C  NL  GFSSG+ PW F+  N*G+   LQ ST+  L E S*RQV *ISA  +  LWR+ S*   R    NKY S  T+A CK
Subject   1195  FPIDAQHFKAGDIIFVSNDAQCPSQAVFKFP*NFT*FICLCS*TFQFLS*LDRCDP*FL*APIFVLLPQ*AD*GGH*GGNG*FMVWTRQCVL*PSEGSIFTRGITLA*LSILC*EQVCRCHQPPNFACCSGLGPFAK*SFLQASP*GS*FRSFKRENGSWDHRAI*AFWLFSE*HPHK*VAEKV*VETCTALEITHLVFSFLWLPVVSLEPKKQPQIFGRSKVLLC*P*LQCYPNLSSGFSSGHSPWSFIGFN*GLCLLLQHSTKT*LLERS*RQVK*ISAALRCMLWRDSS*Q*PREGC*NKYLSCSTVA*CK  2136

Range 6: 1374 to 2135 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
323.2 bits(699) 0.0 160/254(63%) 0/254(0%) Plus/Minus
Query        2  LHRAIVKCEGYLLQLFPLDRD*LGFLQSVRWGTALIHTTCLQEHSKR*ASVENWSQKNIP*LSLTKPQGR*PELKPSYRF*QHHNQGQQRRTFGHLEI*GWFFGTEETIDNHRNERAKSVISSVEQALTYTLSAPHL*KCYSLRSQKALTAL*PQEPFLHLKERNQLP*KST*KKDHLTMGPRTEQHTEFGG**HLQTCAQQRMES*SSVTPLGNMEPSDD*SANCQVQTMSRP*LPQYPLQSAH*GRRTKIDA  763
                LH A V+ E YL Q   L   *L  LQS+    ALIH TCLQE S+ *  VE WS K+ P*L+  K QG  PELKP  +F  H NQGQQRRTF   +I*G FFG+ ET  NHRNE  K VISS  Q  TYT SA HL* C+SL+SQKA  AL* QEPF  LKERNQLP*   *+KDHL  GPR EQH +FGG* HLQTC+QQRMES*++V PL NMEPSD *S +C VQTM+ P  PQ P QSAH GRRTKI A
Subject   1374  LH*ATVEHERYLFQHPSLGHC*LESLQSMHLRAALIHLTCLQERSRS*VFVECWSNKHRP*LNPIKLQGLWPELKPDDKFG*HCNQGQQRRTFDRPKI*GCFFGSRETTGNHRNENTK*VISSAVQVSTYTFSATHL*GCHSLKSQKA*IAL*SQEPFSRLKERNQLP*GLA*RKDHLAKGPRPEQHAKFGG*WHLQTCSQQRMES*ANVIPLVNMEPSDG*STHCLVQTMNYPLPPQCPPQSAHCGRRTKIGA  2135

Range 7: 1194 to 1331 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.5 bits(165) 0.0 35/46(76%) 0/46(0%) Plus/Minus
Query      806  *KAQEHRQMSQVKFRGNLKTTWLRH*ASFDTKMTLPALKY*ASIEN  943
                *K QEHRQM+QVKF GNLKT WL H ASFDTKM  PALK  ASI N
Subject   1194  *KVQEHRQMNQVKFHGNLKTAWLGHWASFDTKMISPALKCWASIGN  1331

Range 8: 1650 to 2132 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.0 bits(417) 0.0 98/161(61%) 0/161(0%) Minus/Plus
Query        5  FQV*EWLLGLQGSQSFLAS**ITLS*MRCREGIS*GLLNT*NH*LGSFISVVVNGFFCAEEPTSNF*VTESPPLLTLIVVLLKSIAWFQLRLSPLGFCQA*LRYILLAPILNRSSSLRMFLKASCVNQCSPPTHTLEKP*LVTIKREKL*QVPLTLHNCSM  487
                FQ *EWLLG QG+  FLA **+T S*M CREGIS* L +T*NH LG FISVV +GF   EE TSNF   ESPPLLTLI +L K I WFQLR  PL F   *LR + +AP LN+  +    LKAS VNQCSP  H LE+ *L   KR  L QVPL  H+C M
Subject   1650  FQA*EWLLGSQGNLGFLAF**MTPS*MSCREGIS*DLHST*NHSLGIFISVVASGFS*TEETTSNFWAIESPPLLTLIAMLPKFIVWFQLRPQPLEFYWV*LRSMFVAPTLNKDLTP*TLLKASQVNQCSPQMHALERL*LAMTKRGMLKQVPLMFHSCLM  2132

Range 9: 1380 to 1508 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.3 bits(158) 0.0 31/43(72%) 0/43(0%) Minus/Plus
Query      629  YFCSPASMS*LQRILRKLWTAHGLDLAICTLIVRGLHIP*GCH  757
                YFCSPA+MS*L+R LR+ W  HGLD A+CTL VRGLHI *G H
Subject   1380  YFCSPAAMS*LRRTLRR*WIVHGLD*AMCTLTVRGLHIH*GYH  1508

Range 10: 1194 to 1292 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.1 bits(127) 0.0 26/33(79%) 0/33(0%) Minus/Plus
Query      845  VLY*CLIFQSW*CHFCVE*CLMP*PGCLQVSAK  943
                V Y*C  FQSW* HFCVE*C M *PGCLQVS K
Subject   1194  VPY*CPTFQSW*YHFCVE*CPMS*PGCLQVSVK  1292

Range 11: 1566 to 1610 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.3 bits(73) 0.0 13/15(87%) 0/15(0%) Minus/Plus
Query      527  KFCMLLCPWSHCQMI  571
                KFCMLL PWS CQMI
Subject   1566  KFCMLLWPWSLCQMI  1610

Grapevine rupestris stem pitting associated virus isolate SK704 A, complete genome

Sequence ID: KX274274.1 Length: 8725 Number of Matches: 11

Range 1: 1195 to 2130 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
614.6 bits(1335) 0.0 259/312(83%) 0/312(0%) Minus/Plus
Query        6  SLLMPNISKLVMSFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLIDITPDFFEHLFLFSCLNELIAEDIEEVMDGSWFGLGNLHFNRQRAPYSLGVSHWINSPFSVEHKFAGVINHQILYVALSLVPLSDDPSFKLTSREVDSALSSVRMALGVTGQSKLFGFLVNNTFINEVQRGYKLRLAQHLKSLTWLFHFCGCQWFLLCRRTNLKFLSDRKSSFADLDCGVAKIYSLVSAQAIAPGVLSGLTKVYSFGSNSQQKLISSNVLEGKLCESVQSPNAHFGETLVSHDQEGKVVTSTPHTSQLLD  941
                SLLMPNISKLV+SFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLID+TPDFFEHLFLFSCLNELI EDIEEVMD SWFGLGN+HFNRQRAPYSLG+SHW+NSPFSVEHKFAG INHQIL+VALSLVPLS+DP FKLT REVDSALSSVRMALG+TGQSKLFGFLVN+T INE+QR YKLRLA+HLKSLTW FHFCGCQWFLL RR NLKFL DRKSSFADLDC VA+IY LVSAQ  APGVL GLTKVY+  SN QQ+L S NVLEGK C++VQ  + + GET VSH QEG V TS  H  QL D
Subject   1195  SLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGNVHFNRQRAPYSLGISHWLNSPFSVEHKFAGAINHQILHVALSLVPLSNDPFFKLTPREVDSALSSVRMALGITGQSKLFGFLVNDTLINEMQRRYKLRLAKHLKSLTWYFHFCGCQWFLLNRRVNLKFLGDRKSSFADLDCNVAQIYRLVSAQVTAPGVLLGLTKVYAHYSNPQQQLNSLNVLEGKSCKTVQPSDTYSGETPVSHGQEGNVETSISHAPQLPD  2130

Range 2: 1194 to 1805 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
383.7 bits(831) 0.0 180/204(88%) 0/204(0%) Plus/Minus
Query      331  QPQK*KSQVSDFKC*ASLNLYPLCTSFMKVLFTKKPKSFDCPVTPRAILTLERAESTSLEVNLKEGSSDNGTKDRATYRIWWLMTPANLCSTENGELIQCDTPREYGAL*RLKCKLPSPNHEPXXXXXXXXXXXXLRQENKNRCSKKSGVISIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINRE  942
                QPQK K QVSDFKC ASLNLY LC S M+V FTKKPKS DCPV PRAILTLERAESTSL V+LK+GS D GTKDRAT RIWWLM PANLCSTENGEL QCD P EYGAL*RLKC LPSPNHE SITSSISS+ISSLRQENKNRCSKKSGV SIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINRE
Subject   1194  QPQKWKYQVSDFKCLASLNLYLLCISLMRVSFTKKPKSLDCPVIPRAILTLERAESTSLGVSLKKGSFDKGTKDRATCRIWWLMAPANLCSTENGELSQCDIPSEYGAL*RLKCTLPSPNHELSITSSISSSISSLRQENKNRCSKKSGVTSIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINRE  1805

Range 3: 1857 to 2135 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
116.5 bits(248) 0.0 59/93(63%) 0/93(0%) Plus/Minus
Query        1  LASSNCEV*GVLVTTFPS*S*LTRVSPKCALGDCTDSHNLPSRTFEEMSFC*ELEPKEYTLVKPDKTPGAIA*AETKL*ILATPQSRSAKEDF  279
                L S NC  * +LV+TFPS   LT VSP+     CT  H+LPSRTF+E+S C* LE    TLVKP+KTPGA+ *AETK *I AT QSRSAKEDF
Subject   1857  LRSGNCGA*EILVSTFPSWPWLTGVSPEYVSEGCTVLHDLPSRTFKELSCC*GLE**A*TLVKPNKTPGAVT*AETKR*I*ATLQSRSAKEDF  2135

Range 4: 1192 to 2130 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
472.6 bits(1025) 0.0 223/313(71%) 0/313(0%) Plus/Minus
Query        6  IEQL*SVRGTCYNFSLLIVTN*GFSKVCVGGLH*FTQLAFKNIRRDELLLRIGAKRIYLS*A*QNPRGDSLS*NQAIDFSNTTIKVSKGGLSVT*KFEVGSSAQKKPLTTTEMKEPSQ*FQVLSKP*LIPSLHLIYESVIH*EAKKL*LPCNPKSHSYT*KSGINFPRSQLKRRII*QWDQGQSNIQNLVVNDTCKLVLNREWRVDPV*HP*GIWSPLTIKVQIAKSKP*AVHNFLNILCNQLIEAGEQK*MLKEVRGNIDQVNREVERLKSIDK*VK*SFAET*RQPG*GIRHHSTQK*HYQL*NIRHQ*RT  944
                I QL S+R TC N SLL + N G S+VCVGGLH FT LAF+NI   ELLLR+G   I L  A Q+ RG  LS*NQ I+ SN TIKVSKGGLS+  KFEV SS Q+KPLTTT+M+ PS+*FQVL K  LIPSLH I E +IH*+AKK  LPC+PKSHSYT*KS INFPRS LK+RII*Q DQGQSN+QNLVV+ TCKL+LNREW V PV*+P* IWSPLT+KV IAKSKP* +HN LNIL NQLIEAGE K*+LKE+RG+I QVNR++ER KS+DK*VK*SFAET*R  G GIRHH TQK*++QL*NI HQ* T
Subject   1192  IGQLWSMRDTCLNISLLAMANWGLSRVCVGGLHGFT*LAFQNI*GVELLLRVGVMSIDLGQAQQDSRGCDLS*NQTINLSNITIKVSKGGLSIAKKFEVNSSIQEKPLTTTKMEIPSK*FQVLGKSQLIPSLHFINEGIIH*KAKKFRLPCDPKSHSYT*KSRINFPRS*LKKRII*QRDQGQSNMQNLVVDGTCKLMLNREWGVKPV*YP**IWSPLTVKVHIAKSKP*TIHNLLNILFNQLIEAGE*K*VLKEIRGHIYQVNRKIERFKSVDK*VK*SFAET*R*SGQGIRHHPTQK*YHQL*NIGHQ*GT  2130

Range 5: 1194 to 2129 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
429.0 bits(930) 0.0 205/312(66%) 0/312(0%) Minus/Plus
Query        7  FSIDA*YFKAGNVIFVSNDA*CLSQVVFKFPRNFT*LICLCS*AFQLLC*LDRYYP*LL*ASIFVLLPQ*ADCRGY*GSYGRLMVWTWQFAL*SSEGSIFPRGVTLDQLSILC*AQVCRCH*PPNSVCCSVLGPIVR*SFF*VDF*GS*FRSFKCKNGSWGYRAVKAFWLLSE*HFHK*GAERV*VKACSTLEITDLALSFLWLSMVSSVPKNQPQISK*PKVLLC*P*LWCC*NL*LGFSSGYRPWGFVRLN*GIFFWLQFSTEAHLFECS*RQVV*ISAVPQRTLWRNPS*SRSRGKSCNKYPSHFTIAR  942
                F IDA YFKAG++IFVS+DA*CL Q++FKFPRNFT*LICL S* FQ   *LDR  P* L*A IF+LLPQ*AD RGY*G YG  MVWTWQ AL* SEGSIF R +TL  L ILC*A VCRCH PPNS CCSVLGP V+*SFF* + *GS*F SFKCKNGSW +RA+  FWL SE*+ H * AE+V*V+ C  LEIT L   FLWLSMVS   K+ PQIS   KVLLC*P*L CC NL  GFSSG+ PW  V L+ G+   LQ ST   L +CS RQV+*  A  +  LWR+PS*   RGK  +KY S  T+AR
Subject   1194  FPIDAQYFKAGDIIFVSDDA*CLGQIIFKFPRNFT*LICLRS*TFQFFG*LDRCDP*FL*APIFILLPQ*AD*RGY*GGYG*FMVWTWQCAL*PSEGSIFTRDITLA*LPILC*A*VCRCHQPPNSACCSVLGPFVK*SFF*ANS*GS*FCSFKCKNGSWDHRAI*TFWLFSE*YPH**NAEKV*VETCQALEITYLVFPFLWLSMVSLESKS*PQISWRSKVLLC*P*L*CCSNLSFGFSSGHSPWSLVGLDQGLCSLLQPSTTTQLLKCSGRQVM*NRAALRHILWRDPS*PWPRGKC*DKYLSCSTVAR  2129

Range 6: 1373 to 2128 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
332.4 bits(719) 0.0 163/252(65%) 0/252(0%) Plus/Minus
Query        8  RAIVKCEGYLLQLFPLDRD*LGFLQSVRWGTALIHTTCLQEHSKR*ASVENWSQKNIP*LSLTKPQGR*PELKPSYRF*QHHNQGQQRRTFGHLEI*GWFFGTEETIDNHRNERAKSVISSVEQALTYTLSAPHL*KCYSLRSQKALTAL*PQEPFLHLKERNQLP*KST*KKDHLTMGPRTEQHTEFGG**HLQTCAQQRMES*SSVTPLGNMEPSDD*SANCQVQTMSRP*LPQYPLQSAH*GRRTKIDA  763
                RA V+ E YL Q FPL   *LG LQS+    A  + TCL EH + *  VE WS ++ P  S T+ QG *PELKP+ +F QH+NQGQQRRTF   EI*G  F + ETIDNH+N   K VISS  Q  TYT SA H *  +SL+SQK   AL* QEPFLHLKE+NQLP*+  *KKDHLT GPRTEQH EFGG* HLQT AQQRM S*+SV  L NMEPSD *SA+CQVQTM+ P* PQYPLQSAH*GRR KI A
Subject   1373  RATVEHERYLSQHFPLGHG*LGSLQSMCRRAARFYMTCLPEHLRS*VVVEGWSNEHRPWSSPTRLQGL*PELKPNDKFEQHYNQGQQRRTFDRQEI*G*LFDSRETIDNHKNGNTK*VISSAWQVSTYTFSAFH**GYHSLKSQKV*IAL*SQEPFLHLKEQNQLP*ELA*KKDHLTKGPRTEQHAEFGG*WHLQTYAQQRMGS*ASVISLVNMEPSDG*SAHCQVQTMNYP*PPQYPLQSAH*GRRIKIGA  2128

Range 7: 1193 to 1330 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.0 bits(164) 0.0 36/46(78%) 0/46(0%) Plus/Minus
Query      806  *KAQEHRQMSQVKFRGNLKTTWLRH*ASFDTKMTLPALKY*ASIEN  943
                *K QE RQMSQVKFRGNLK  W RH*AS DTKM  PALKY ASI N
Subject   1193  *KVQERRQMSQVKFRGNLKIIWPRH*ASSDTKMISPALKYWASIGN  1330

Range 8: 1649 to 2125 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
205.4 bits(442) 0.0 102/159(64%) 0/159(0%) Minus/Plus
Query       11  FQV*EWLLGLQGSQSFLAS**ITLS*MRCREGIS*GLLNT*NH*LGSFISVVVNGFFCAEEPTSNF*VTESPPLLTLIVVLLKSIAWFQLRLSPLGFCQA*LRYILLAPILNRSSSLRMFLKASCVNQCSPPTHTLEKP*LVTIKREKL*QVPLTLHNC  487
                FQV*EWLLG QG+ +FLA **+  S M+CREGIS* L +T*NH LG  I VVVNGF   EE TSNF   ESPPLLTLIV+LLK I WFQLR  PL  C A* R +L+ P LN +S+  MF KAS V  CSPPTHTLE+P L   KRE L QV L LH+C
Subject   1649  FQV*EWLLGSQGNLNFLAF**MIPSLMKCREGIS*DLPST*NHLLGISIFVVVNGFS*IEELTSNFLAIESPPLLTLIVMLLKFIVWFQLRSQPLESCWA*PRSMLITPTLNNNSTP*MFWKASHVKPCSPPTHTLERPQLAMAKREMLRQVSLMLHSC  2125

Range 9: 1379 to 1507 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
81.3 bits(171) 0.0 34/43(79%) 0/43(0%) Minus/Plus
Query      629  YFCSPASMS*LQRILRKLWTAHGLDLAICTLIVRGLHIP*GCH  757
                YF SPASMS*L+RILR+LW  HGLDLA+CTL VRGLHI *G H
Subject   1379  YFYSPASMS*LKRILRRLWIVHGLDLAMCTLTVRGLHIH*GYH  1507

Range 10: 1193 to 1291 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.3 bits(121) 0.0 26/33(79%) 0/33(0%) Minus/Plus
Query      845  VLY*CLIFQSW*CHFCVE*CLMP*PGCLQVSAK  943
                V Y*C IFQSW* HFCV *CLMP P  LQVSAK
Subject   1193  VPY*CPIFQSW*YHFCVG*CLMPWPDYLQVSAK  1291

Range 11: 1565 to 1609 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.4 bits(84) 0.0 14/15(93%) 0/15(0%) Minus/Plus
Query      527  KFCMLLCPWSHCQMI  571
                KFCMLLCPWS CQMI
Subject   1565  KFCMLLCPWSLCQMI  1609

Grapevine rupestris stem pitting associated virus isolate GRSPaV LSL, complete genome

Sequence ID: KR054735.1 Length: 8754 Number of Matches: 12

Range 1: 1195 to 2130 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
447.4 bits(970) 0.0 185/312(59%) 0/312(0%) Minus/Plus
Query        6  SLLMPNISKLVMSFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLIDITPDFFEHLFLFSCLNELIAEDIEEVMDGSWFGLGNLHFNRQRAPYSLGVSHWINSPFSVEHKFAGVINHQILYVALSLVPLSDDPSFKLTSREVDSALSSVRMALGVTGQSKLFGFLVNNTFINEVQRGYKLRLAQHLKSLTWLFHFCGCQWFLLCRRTNLKFLSDRKSSFADLDCGVAKIYSLVSAQAIAPGVLSGLTKVYSFGSNSQQKLISSNVLEGKLCESVQSPNAHFGETLVSHDQEGKVVTSTPHTSQLLD  941
                SL+MPNI KL++SFLCRMMPN LARLSSSFRE+SLDSFVY+LEPFNFS+NL+DIT +FFEH+FLFSC NELI E++EEVMD SWFGLGN HFNR++ P+S G   W+NS FSVEHKF G++N+QIL+  LSL+PL +DP FK + RE+DSALS V+ AL +TGQSKLF F+V++T +  VQ  Y+ RL+ H+K+LT  FH CG QWFLLCRR NL+FL DRKSSFADL C VAKIY+LV AQ   P   SGL +VY   S S +         G+  +S+++ N   G   +  D+  K  T   H S  L+
Subject   1195  SLIMPNIHKLIISFLCRMMPNVLARLSSSFRESSLDSFVYSLEPFNFSINLVDITAEFFEHMFLFSCRNELIEENVEEVMDNSWFGLGNAHFNRRQNPFSFGRDFWLNSKFSVEHKFPGIVNNQILHAVLSLIPLPNDPKFKPSGREIDSALSRVKAALAITGQSKLFRFVVDDTLLRSVQSAYRFRLSSHIKALTEFFHICGLQWFLLCRRANLRFLCDRKSSFADLSCQVAKIYNLVVAQVTLPNASSGLIQVYIDHSRSNKNSNPHFAATGEARDSIEAVNLDSGVPPLCDDKVIKATTVALHASPKLN  2130

Range 2: 1194 to 1805 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
201.8 bits(434) 0.0 111/204(54%) 0/204(0%) Plus/Minus
Query      331  QPQK*KSQVSDFKC*ASLNLYPLCTSFMKVLFTKKPKSFDCPVTPRAILTLERAESTSLEVNLKEGSSDNGTKDRATYRIWWLMTPANLCSTENGELIQCDTPREYGAL*RLKCKLPSPNHEPXXXXXXXXXXXXLRQENKNRCSKKSGVISIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINRE  942
                +PQ  K+ V  F C  SL  Y LCT   +V  T   KS DCPV  +A LT + AES SL   L  GS  NG  D     I  L  P NLCSTEN EL Q   P+E G   RLKC LPSPN E SITSS  S+I+SLRQEN+N CSK S V+S KL EKLKGSR  TNES+E S KLED+LA+  GII  +N+I S  +LGI +E
Subject   1194  RPQMWKNSVRAFMCEESLKRYALCTLRRRVSSTTNLKSLDCPVIAKAALTRDSAESISLPEGLNLGSLGNGINDNTACSI*LLTIPGNLCSTENLELSQKSLPKENGFCRRLKCALPSPNQELSITSSTFSSINSLRQENRNICSKNSAVMSTKLIEKLKGSREYTNESNEDSLKLEDSLARTFGIILQRNEIMSL*MLGIIKE  1805

Range 3: 1796 to 1924 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.7 bits(113) 0.0 22/43(51%) 0/43(0%) Plus/Minus
Query      212  *PELKPSYRF*QHHNQGQQRRTFGHLEI*GWFFGTEETIDNHR  340
                *P L+PSY+      +G+QRRTFGH E * W  G EET ++H+
Subject   1796  *PVLQPSYKSSPPDRKGRQRRTFGHTET*DWLSGREETTEDHK  1924

Range 4: 1510 to 1989 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
110.6 bits(235) 0.0 65/160(41%) 0/160(0%) Plus/Minus
Query      147  LLLRIGAKRIYLS*A*QNPRGDSLS*NQAIDFSNTTIKVSKGGLSVT*KFEVGSSAQKKPLTTTEMKEPSQ*FQVLSKP*LIPSLHLIYESVIH*EAKKL*LPCNPKSHSYT*KSGINFPRSQLKRRII*QWDQGQSNIQNLVVNDTCKLVLNREWRVDP  626
                +L+R G   + L+  *   R  +L  NQ I+  + T KV KGGLSVT K E+GS A+KKPL TT +++ S+   V  +P  I +LH   + VIH + +KL L CN +S     +  I F   +LK RII  WDQ Q  +Q L+V++T K + N +  V+P
Subject   1510  ILVRAGVINVNLNQT**CIR*CNLCYNQVINLRHLTGKVGKGGLSVTQKPEIGSPAEKKPLKTTNVEKFSEGLYV*GEPKTICTLHATQKGVIHHKPEKLGLSCNCQSRLNARQC*IYFSAGRLKFRIIR*WDQ*QHRMQYLIVDNTWKFMFNGKLGVEP  1989

Range 5: 1192 to 1488 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
87.7 bits(185) 0.0 46/99(46%) 0/99(0%) Plus/Minus
Query      648  WSPLTIKVQIAKSKP*AVHNFLNILCNQLIEAGEQK*MLKEVRGNIDQVNREVERLKSIDK*VK*SFAET*RQPG*GIRHHSTQK*HYQL*NIRHQ*RT  944
                W    I+++I   KP  VH F N+L + LI AG+Q+ M K++  N++ +N +VERLK I K V * F ET*R PG  I HHST++*  +L N+ H  RT
Subject   1192  WVLSAIEMRIT*PKPRIVHYFFNVLLD*LIAAGKQEHMFKKLSRNVN*IN*KVERLKGIHKRV**RFPET*R*PGQNIWHHSTEE*DNELVNVGHYQRT  1488

Range 6: 1194 to 1610 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.9 bits(131) 0.0 50/139(36%) 0/139(0%) Minus/Plus
Query      526  FSIDA*YFKAGNVIFVSNDA*CLSQVVFKFPRNFT*LICLCS*AFQLLC*LDRYYP*LL*ASIFVLLPQ*ADCRGY*GSYGRLMVWTWQFAL*SSEGSIFPRGVTLDQLSILC*AQVCRCH*PPNSVCCSVLGPIVR*S  942
                F  +A + +A  +I + NDA C  Q +FKF   F  L+C+  *AFQL  *   +Y *+ *  + V LPQ* +    * S G+ +VW    A  S    IF     L QL +  *  + R     N+ C  V+ PI  *S
Subject   1194  FFDNAQHSQAHYLIPL*NDAKCSGQAIFKFQGIFIRLVCVFP*AFQLFN*FS*HYG*VF*TYVPVFLPQ*VNRGER*RSNGQFLVWAR*CAFQSPTKPIFFWKRFLAQLQVFR*T*ISRYCQQSNTACGVVIDPIT**S  1610

Range 7: 1676 to 1987 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.1 bits(127) 0.0 42/104(40%) 0/104(0%) Minus/Plus
Query      149  LQGSQSFLAS**ITLS*MRCREGIS*GLLNT*NH*LGSFISVVVNGFFCAEEPTSNF*VTESPPLLTLIVVLLKSIAWFQLRLSPLGFCQA*LRYILLAPILNR  460
                LQ + SF     +T   + CR  I  G  +T*   L     VV +GFF A EP S F VTESPPL T  V   + I W   RL  L   Q * ++ L+ P L R
Subject   1676  LQDNPSFSGLWWMTPFCVACRVHIVLGSPHT*RPSLNFSTFVVFSGFFSAGEPISGFCVTESPPLPTFPVRWRRFITWL*HRLHYLMHHQV*FKFTLITPALTR  1987

Range 8: 1797 to 1925 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.3 bits(110) 0.0 26/43(60%) 0/43(0%) Minus/Plus
Query      211  LWLSMVSSVPKNQPQISK*PKVLLC*P*LWCC*NL*LGFSSGY  339
                LW S+VSS+P++Q Q+S *PKVLLC P L    +L*LG S+GY
Subject   1797  LWSSVVSSLPESQSQVSV*PKVLLCRPFLSGGEDL*LGCSTGY  1925

Range 9: 1385 to 1450 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.9 bits(61) 0.0 13/22(59%) 0/22(0%) Minus/Plus
Query      686  CSPASMS*LQRILRKLWTAHGL  751
                C PA+MS* +R L+K WT  GL
Subject   1385  CFPAAMS*SRRTLKK*WTILGL  1450

Range 10: 1193 to 1285 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.5 bits(58) 0.0 18/31(58%) 0/31(0%) Minus/Plus
Query      851  VLY*CLIFQSW*CHFCVE*CLMP*PGCLQVS  943
                VL *C  F S   H  VE*C M  PG LQVS
Subject   1193  VL**CPTFTSSLSHSSVE*CQMFWPGYLQVS  1285

Range 11: 1857 to 2060 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
44.6 bits(91) 0.0 28/68(41%) 0/68(0%) Plus/Minus
Query       76  SPKCALGDCTDSHNLPSRTFEEMSFC*ELEPKEYTLVKPDKTPGAIA*AETKL*ILATPQSRSAKEDF  279
                +P+  L    +S   P      + F  E E    T +KPD   G +  A TKL*I AT Q RSAKEDF
Subject   1857  TPESKLTASIESRASPVAAKCGLEFLLERE*SM*T*IKPDDALGNVTCATTKL*IFAT*QERSAKEDF  2060

Range 12: 1244 to 1330 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.9 bits(59) 0.0 15/29(52%) 0/29(0%) Plus/Minus
Query      806  *KAQEHRQMSQVKFRGNLKTTWLRH*ASF  892
                *KAQ + Q S +K   NLK  W  H ASF
Subject   1244  *KAQGNTQTSLMKIP*NLKIAWPEHLASF  1330

Rupestris stem pitting associated virus isolate RSPaV PN, complete genome

Sequence ID: AY368172.2 Length: 8743 Number of Matches: 11

Range 1: 1195 to 2124 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
525.7 bits(1141) 0.0 218/310(70%) 0/310(0%) Minus/Plus
Query       12  SLLMPNISKLVMSFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLIDITPDFFEHLFLFSCLNELIAEDIEEVMDGSWFGLGNLHFNRQRAPYSLGVSHWINSPFSVEHKFAGVINHQILYVALSLVPLSDDPSFKLTSREVDSALSSVRMALGVTGQSKLFGFLVNNTFINEVQRGYKLRLAQHLKSLTWLFHFCGCQWFLLCRRTNLKFLSDRKSSFADLDCGVAKIYSLVSAQAIAPGVLSGLTKVYSFGSNSQQKLISSNVLEGKLCESVQSPNAHFGETLVSHDQEGKVVTSTPHTSQL  941
                SLLMPNISKLV SF CRMMPNALARLSSSFRE+SLDSFVYALEPFNF+VNLID+TPDFFEHLFLFSCLNEL+ E+IEEVMD SWFGL N+HFNRQRAPYSLG SHW++SPFSVEHKF G++NHQIL VALSL+PL +DP+F+ TS E++ +L S+RMAL  T QSKLFGFLVN+  I+E+Q+ YK +LAQHLK+LTW FHFCG QWFLL +R NLKFL + KSSFADLDC VAK+Y+LV  QAIAP  LSGL KVY   SN QQK     + +G+ CE VQS +A        + QEG+V TS PH +QL
Subject   1195  SLLMPNISKLVTSFFCRMMPNALARLSSSFRESSLDSFVYALEPFNFAVNLIDVTPDFFEHLFLFSCLNELMEENIEEVMDNSWFGLSNVHFNRQRAPYSLGTSHWLSSPFSVEHKFTGIVNHQILQVALSLIPLPNDPAFRPTSEEINFSLLSIRMALESTRQSKLFGFLVNSALISEMQKKYKTKLAQHLKALTWFFHFCGLQWFLLSKRANLKFLGECKSSFADLDCNVAKLYNLVITQAIAPRALSGLIKVYVGSSNPQQKSNPQTIFDGESCELVQSFHAGIEGPQSCNSQEGEVATSIPHATQL  2124

Range 2: 1194 to 1805 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
294.8 bits(637) 0.0 148/204(73%) 0/204(0%) Plus/Minus
Query      331  QPQK*KSQVSDFKC*ASLNLYPLCTSFMKVLFTKKPKSFDCPVTPRAILTLERAESTSLEVNLKEGSSDNGTKDRATYRIWWLMTPANLCSTENGELIQCDTPREYGAL*RLKCKLPSPNHEPXXXXXXXXXXXXLRQENKNRCSKKSGVISIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINRE  942
                +PQK*K+QVS FKC AS  LY  C S M+ LFTKKPKSFDC V  RAIL L+R +  S EV L  GS  +G KDRAT +I  L  P NLCSTE GEL QC+ P EYGAL RLK  L SPNHE SITSSI S+I+SLRQENKNRCSKKSGV SIK T KLKGSRA*TNESSE SRKLED+LAKALGIIR KND+TSFEILGINRE
Subject   1194  RPQK*KNQVSAFKCWASFVLYFFCISLMRALFTKKPKSFDCLVDSRAILMLKREKLISSEVGLNAGSFGSGIKDRATCKI**LTIPVNLCSTEKGELSQCEVPSEYGALWRLK*TLLSPNHELSITSSIFSSINSLRQENKNRCSKKSGVTSIKFTAKLKGSRA*TNESSEDSRKLEDSLAKALGIIRQKNDVTSFEILGINRE  1805

Range 3: 1860 to 2039 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.3 bits(158) 0.0 37/60(62%) 0/60(0%) Plus/Minus
Query       97  DCTDSHNLPSRTFEEMSFC*ELEPKEYTLVKPDKTPGAIA*AETKL*ILATPQSRSAKED  276
                DCT+SH+ PS+    + FC  LE    TL+KPDK  GAIA*  TKL* LAT QSRSAKED
Subject   1860  DCTNSHDSPSKMVWGLDFCWGLELPT*TLIKPDKALGAIA*VITKL*SLATLQSRSAKED  2039

Range 4: 1192 to 2124 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
297.1 bits(642) 0.0 157/311(50%) 0/311(0%) Plus/Minus
Query       12  QL*SVRGTCYNFSLLIVTN*GFSKVCVGGLH*FTQLAFKNIRRDELLLRIGAKRIYLS*A*QNPRGDSLS*NQAIDFSNTTIKVSKGGLSVT*KFEVGSSAQKKPLTTTEMKEPSQ*FQVLSKP*LIPSLHLIYESVIH*EAKKL*LPCNPKSHSYT*KSGINFPRSQLKRRII*QWDQGQSNIQNLVVNDTCKLVLNREWRVDPV*HP*GIWSPLTIKVQIAKSKP*AVHNFLNILCNQLIEAGEQK*MLKEVRGNIDQVNREVERLKSIDK*VK*SFAET*RQPG*GIRHHSTQK*HYQL*NIRHQ*RT  944
                QL  +R    +  LL VT       C+  L+ FT  A KN      LL I    I  +* * + R +SLS NQ ++F +  IK+ KGGL+ T KFEV S   ++PL T EMK+PS+ FQVL +  L+  LHL YE  +H EAK+ *LP   +SH Y *+  IN  R   + RII QW+QG SN+QNL++N+  KL+LNR+ R +PV*    IWSPL I+V IAKS+P* +HN LNI  +Q IEAGEQK*MLK+VRGNI+Q+  +V+R KSID+*VK* F +T*    * +RHHS +K*   L*NI H *RT
Subject   1192  QLSGMRNARCDLPLLAVTRLRSFNACMERLYQFT*FAIKNGLGVRFLLGIRTANIDFN*T**SSRRNSLSYNQIVEFGDVAIKICKGGLTFTQKFEVSSLT*QEPLKTAEMKKPSECFQVLGEFRLVFFLHLTYEGAVHQEAKEF*LPRGLESHPYA*EGKINLLRGWPECRIIWQWNQG*SNLQNLMINNPRKLMLNRKGRAEPV*SSQ*IWSPLAIEVNIAKSEP*IIHNLLNIFLHQFIEAGEQK*MLKKVRGNINQIYCKVKRFKSIDE*VK*RFTKT*G*SS*SVRHHSAEK*RN*L*NIGH**RT  2124

Range 5: 1194 to 1961 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
195.3 bits(420) 0.0 125/256(49%) 0/256(0%) Minus/Plus
Query      175  FSIDA*YFKAGNVIFVSNDA*CLSQVVFKFPRNFT*LICLCS*AFQLLC*LDRYYP*LL*ASIFVLLPQ*ADCRGY*GSYGRLMVWTWQFAL*SSEGSIFPRGVTLDQLSILC*AQVCRCH*PPNSVCCSVLGPIVR*SFF*VDF*GS*FRSFKCKNGSWGYRAVKAFWLLSE*HFHK*GAERV*VKACSTLEITDLALSFLWLSMVSSVPKNQPQISK*PKVLLC*P*LWCC*NL*LGFSSGYRPWGFVRLN*GI  942
                FSI+A YFKA  VIF+ NDA*  S  + KF   FT*LI LCS* F L    D  YP*L *ASIFVLLPQ* D   Y*G YG  MV T Q +L S +GSIF    TL QLS+ C*A V    *  N   CS+L    +*S    + *G *F   K K+GS  + A+K  WLL E   HK* AE++  +    LE T L  SFL  SMV +  ++ PQI  *  VLLC  *L     L  G++SGY    F+R N* +
Subject   1194  FSINAQYFKASYVIFLPNDA*RFS*TILKFS*IFT*LIRLCS*TF*LCSKFD*CYP*LF*ASIFVLLPQ*IDGGKY*GGYG*FMVRT*QCSLQSPKGSIFTGNFTLAQLSLFC*A*VYGDC*SSNFAGCSILDSTAK*SCIQANL*GD*FFPLKHKDGSRVHEAIKTLWLLGEQRPHK*DAEKIQDETRPALESTHLVFSFLRSSMVPAK*ES*PQIFG*M*VLLCRS*LQRRQTLQFGYNSGYCA*SFIRFN*SL  1961

Range 6: 1373 to 1954 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
146.8 bits(314) 0.0 91/194(47%) 0/194(0%) Plus/Minus
Query      182  *LSLTKPQGR*PELKPSYRF*QHHNQGQQRRTFGHLEI*GWFFGTEETIDNHRNERAKSVISSVEQALTYTLSAPHL*KCYSLRSQKALTAL*PQEPFLHLKERNQLP*KST*KKDHLTMGPRTEQHTEFGG**HLQTCAQQRMES*SSVTPLGNMEPSDD*SANCQVQTMSRP*LPQYPLQSAH*GRRTKIDA  763
                *L+L K   +*PEL P+ R  +  NQ  QRRT+ H +I*G       TI++ RNE+ K V+SS  +  +   SA HL*   S RSQ+ L A   +EP L L+ +N  P +  * +DHL +  R EQ  +F  *    T AQQ+ ES*+SV    NMEP  D*S +C V+TM+ P* PQY   S H*GRRTKIDA
Subject   1373  *LNLIKL*AQ*PEL*PNCRVWRRCNQDLQRRTYIHPKI*G*LSYLAGTIEDRRNEKTK*VLSSAGRVSSCIFSASHL*GRCSPRSQRVLIASWTREPSLCLRGKN*SPQRLA*MQDHLAVESRIEQPAKFDD*QSP*TYAQQKRES*ASVKFPVNMEPFGD*SEHC*VRTMNYP*PPQYFPPSIH*GRRTKIDA  1954

Range 7: 1193 to 1330 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.0 bits(118) 0.0 29/46(63%) 0/46(0%) Plus/Minus
Query      806  *KAQEHRQMSQVKFRGNLKTTWLRH*ASFDTKMTLPALKY*ASIEN  943
                *K QEHR+MSQVK   NL+   L+ *ASF  KMT  ALKY A IEN
Subject   1193  *KVQEHRRMSQVKIHENLRIV*LKR*ASFGRKMT*LALKYWALIEN  1330

Range 8: 1664 to 2086 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.3 bits(193) 0.0 60/141(43%) 0/141(0%) Minus/Plus
Query       50  WLLGLQGSQSFLAS**ITLS*MRCREGIS*GLLNT*NH*LGSFISVVVNGFFCAEEPTSNF*VTESPPLLTLIVVLLKSIAWFQLRLSPLGFCQA*LRYILLAPILNRSSSLRMFLKASCVNQCSPPTHTLEKP*LVTIKR  472
                WL   +G+Q+ LAS *   S*+RCR+       +T* H LG FIS V NG     E TSNF V  SPPL  LI     S  W  LRL  L   Q *L+ +L   I +R+ + + FL A+ VN  S     L+   LVT KR
Subject   1664  WLSSPRGNQNSLASW*TAPS*VRCRKNTRRNSPST*KHSLGFFISAVFNGSC*VRELTSNFWVNVSPPLQILIATSPNSTIWL*LRLLRLELYQV*LKSMLAVLIPSRNLTPKPFLMANHVNWYSLSMQALKDLNLVTAKR  2086

Range 9: 1376 to 1492 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
65.7 bits(137) 0.0 26/39(67%) 0/39(0%) Minus/Plus
Query      644  IYFCSPASMS*LQRILRKLWTAHGLDLAICTLIVRGLHI  760
                IYFCSPASM+* ++ILR+LW  HG DLA+ T I +GLHI
Subject   1376  IYFCSPASMN*WRKILRRLWIIHGSDLAMFTSIAKGLHI  1492

Range 10: 1193 to 1255 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.3 bits(62) 0.0 15/21(71%) 0/21(0%) Minus/Plus
Query      881  VLY*CLIFQSW*CHFCVE*CL  943
                VLY*C IFQS   HF  E*CL
Subject   1193  VLY*CPIFQS*LRHFSAE*CL  1255

Range 11: 1565 to 1609 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.0 bits(57) 0.0 11/15(73%) 0/15(0%) Minus/Plus
Query      527  KFCMLLCPWSHCQMI  571
                KFC LL P  HCQMI
Subject   1565  KFCRLLYP*FHCQMI  1609

Nucleotide Sequence (349 letters)

Query ID:ds2016-132_4
Query definition:No definition line
Query length:951
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 16 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
35
70
105
140
175
210
245
280
315
349

Descriptions

Alignments

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OB1

Sequence ID: AB277783.1 Length: 2876 Number of Matches: 6

Range 1: 2266 to 2613 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
278.3 bits(601) 0.0 114/116(98%) 0/116(0%) Plus/Plus
Query        1  GCIDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTMRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESA  348
                G IDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTT+RRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESA
Subject   2266  GAIDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESA  2613

Range 2: 2271 to 2612 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
252.6 bits(545) 0.0 111/114(97%) 0/114(0%) Minus/Minus
Query        6  ALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRWIFHTIFA*YMQNLRMVVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSDMPDSPNARINSSM  347
                ALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRW+FHTIFA*YMQNLR VVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSDMPDSPNARINSS+
Subject   2271  ALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRWMFHTIFA*YMQNLRRVVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSDMPDSPNARINSSI  2612

Range 3: 2275 to 2613 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
252.2 bits(544) 0.0 106/113(94%) 0/113(0%) Minus/Minus
Query       10  RALICDSKEEVKGCKLFILIKSLLGPISGWNPRLQMDIPHDFRIVHAKSAHGSHFPYYSSNFRPIQVTEGTLSNQG*SLRATNIRAMACNIYRNVKLIAL*YARLTECSNQLI  348
                RALICDSKEEVKGCKLFI IKSLLGPISGWNPRLQMD+PHDF IVHAKSA GSHFP YSSNFRPIQVTEGTLSN G*SLRATN+RAMACNIYRNVKLIAL*YARLTECSNQLI
Subject   2275  RALICDSKEEVKGCKLFIFIKSLLGPISGWNPRLQMDVPHDFCIVHAKSAQGSHFPNYSSNFRPIQVTEGTLSN*G*SLRATNVRAMACNIYRNVKLIAL*YARLTECSNQLI  2613

Range 4: 2276 to 2614 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
247.6 bits(534) 0.0 106/113(94%) 0/113(0%) Minus/Minus
Query       11  ARSHL*LQGRSQRLQTFHSH*IPSWPN*RVESPSPDGYSTRFSHSTCKICAW*SLPLLFQQFQTYSGHRRDSFQSRLIFESYQHQSNGVQYLSQR*TDRSLICQTHRMLESTH  349
                ARSHL*LQGRSQRLQTFH H*IPSWPN*RVESPSPDG STRF HSTCKICA *SLP LFQQFQTYSGHRRDSFQ RLIFESYQ QSNGVQYLSQR*TDRSLICQTHRMLESTH
Subject   2276  ARSHL*LQGRSQRLQTFHFH*IPSWPN*RVESPSPDGCSTRFLHSTCKICAG*SLP*LFQQFQTYSGHRRDSFQLRLIFESYQRQSNGVQYLSQR*TDRSLICQTHRMLESTH  2614

Range 5: 2271 to 2612 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
242.1 bits(522) 0.0 106/114(93%) 0/114(0%) Plus/Plus
Query        6  HR*VDSSIR*VWHIRERSV*RCDRYCTPLL*CW*LSKINLDWKESLL*PE*V*NCWNNKGSDYHAQILHVLCENRVEYPSGDGDSTR*LGQEGI**E*KVCSL*LLPWSHR*ER  347
                +R*VDSSIR*VWHIRERSV*RCDRYCTPLL* W*LSKINL+WKESLL*PE*V*NCWNN GSDY AQILHVLC+NRVE+PSGDGDSTR*LGQEGI**+*KVCSL*LLPWSHR*ER
Subject   2271  NR*VDSSIR*VWHIRERSV*RCDRYCTPLL*RW*LSKINLNWKESLL*PE*V*NCWNN*GSDYPAQILHVLCKNRVEHPSGDGDSTR*LGQEGI**K*KVCSL*LLPWSHR*ER  2612

Range 6: 2276 to 2614 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
240.7 bits(519) 0.0 108/113(96%) 0/113(0%) Plus/Plus
Query       11  MS*FEHSVSLAYQRAISLTLR*ILHAIALMLVALKDQP*LERVPSVT*IGLKLLE**GK*LPCADFACTMRKSCGISIWRRGFHPLIGPRRDLMRMKSLQPLTSSLESQMRAR  349
                MS*FEHSVSLAYQRAISLTLR*ILHAIAL LVALKDQP*LERVPSVT*IGLKLLE* GK*LPCADFACTM+KSCG SIWRRGFHPLIGPRRDLM+MKSLQPLTSSLESQMRAR
Subject   2276  MS*FEHSVSLAYQRAISLTLR*ILHAIALTLVALKDQP*LERVPSVT*IGLKLLE*LGK*LPCADFACTMQKSCGTSIWRRGFHPLIGPRRDLMKMKSLQPLTSSLESQMRAR  2614

Rupestris stem pitting associated virus gene for coat protein, complete cds, strain: Hiz1

Sequence ID: AB331431.1 Length: 780 Number of Matches: 6

Range 1: 241 to 588 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
278.3 bits(601) 0.0 114/116(98%) 0/116(0%) Plus/Plus
Query        1  GCIDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTMRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESA  348
                G IDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTT+RRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESA
Subject    241  GAIDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESA  588

Range 2: 246 to 587 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
252.6 bits(545) 0.0 111/114(97%) 0/114(0%) Minus/Minus
Query        6  ALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRWIFHTIFA*YMQNLRMVVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSDMPDSPNARINSSM  347
                ALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRW+FHTIFA*YMQNLR VVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSDMPDSPNARINSS+
Subject    246  ALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRWMFHTIFA*YMQNLRRVVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSDMPDSPNARINSSI  587

Range 3: 250 to 588 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
252.2 bits(544) 0.0 106/113(94%) 0/113(0%) Minus/Minus
Query       10  RALICDSKEEVKGCKLFILIKSLLGPISGWNPRLQMDIPHDFRIVHAKSAHGSHFPYYSSNFRPIQVTEGTLSNQG*SLRATNIRAMACNIYRNVKLIAL*YARLTECSNQLI  348
                RALICDSKEEVKGCKLFI IKSLLGPISGWNPRLQMD+PHDF IVHAKSA GSHFP YSSNFRPIQVTEGTLSN G*SLRATN+RAMACNIYRNVKLIAL*YARLTECSNQLI
Subject    250  RALICDSKEEVKGCKLFIFIKSLLGPISGWNPRLQMDVPHDFCIVHAKSAQGSHFPNYSSNFRPIQVTEGTLSN*G*SLRATNVRAMACNIYRNVKLIAL*YARLTECSNQLI  588

Range 4: 251 to 589 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
247.6 bits(534) 0.0 106/113(94%) 0/113(0%) Minus/Minus
Query       11  ARSHL*LQGRSQRLQTFHSH*IPSWPN*RVESPSPDGYSTRFSHSTCKICAW*SLPLLFQQFQTYSGHRRDSFQSRLIFESYQHQSNGVQYLSQR*TDRSLICQTHRMLESTH  349
                ARSHL*LQGRSQRLQTFH H*IPSWPN*RVESPSPDG STRF HSTCKICA *SLP LFQQFQTYSGHRRDSFQ RLIFESYQ QSNGVQYLSQR*TDRSLICQTHRMLESTH
Subject    251  ARSHL*LQGRSQRLQTFHFH*IPSWPN*RVESPSPDGCSTRFLHSTCKICAG*SLP*LFQQFQTYSGHRRDSFQLRLIFESYQRQSNGVQYLSQR*TDRSLICQTHRMLESTH  589

Range 5: 246 to 587 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
242.1 bits(522) 0.0 106/114(93%) 0/114(0%) Plus/Plus
Query        6  HR*VDSSIR*VWHIRERSV*RCDRYCTPLL*CW*LSKINLDWKESLL*PE*V*NCWNNKGSDYHAQILHVLCENRVEYPSGDGDSTR*LGQEGI**E*KVCSL*LLPWSHR*ER  347
                +R*VDSSIR*VWHIRERSV*RCDRYCTPLL* W*LSKINL+WKESLL*PE*V*NCWNN GSDY AQILHVLC+NRVE+PSGDGDSTR*LGQEGI**+*KVCSL*LLPWSHR*ER
Subject    246  NR*VDSSIR*VWHIRERSV*RCDRYCTPLL*RW*LSKINLNWKESLL*PE*V*NCWNN*GSDYPAQILHVLCKNRVEHPSGDGDSTR*LGQEGI**K*KVCSL*LLPWSHR*ER  587

Range 6: 251 to 589 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
240.7 bits(519) 0.0 108/113(96%) 0/113(0%) Plus/Plus
Query       11  MS*FEHSVSLAYQRAISLTLR*ILHAIALMLVALKDQP*LERVPSVT*IGLKLLE**GK*LPCADFACTMRKSCGISIWRRGFHPLIGPRRDLMRMKSLQPLTSSLESQMRAR  349
                MS*FEHSVSLAYQRAISLTLR*ILHAIAL LVALKDQP*LERVPSVT*IGLKLLE* GK*LPCADFACTM+KSCG SIWRRGFHPLIGPRRDLM+MKSLQPLTSSLESQMRAR
Subject    251  MS*FEHSVSLAYQRAISLTLR*ILHAIALTLVALKDQP*LERVPSVT*IGLKLLE*LGK*LPCADFACTMQKSCGTSIWRRGFHPLIGPRRDLMKMKSLQPLTSSLESQMRAR  589

Rupestris stem pitting associated virus gene for coat protein, complete cds, strain: Hiz12 1

Sequence ID: AB331436.1 Length: 780 Number of Matches: 6

Range 1: 241 to 588 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
278.3 bits(601) 0.0 114/116(98%) 0/116(0%) Plus/Plus
Query        1  GCIDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTMRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESA  348
                G IDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTT+RRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESA
Subject    241  GAIDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESA  588

Range 2: 250 to 588 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
256.3 bits(553) 0.0 107/113(95%) 0/113(0%) Minus/Minus
Query       10  RALICDSKEEVKGCKLFILIKSLLGPISGWNPRLQMDIPHDFRIVHAKSAHGSHFPYYSSNFRPIQVTEGTLSNQG*SLRATNIRAMACNIYRNVKLIAL*YARLTECSNQLI  348
                RALICDSKEEVKGCKLFI IKSLLGPISGWNPRLQMD+PHDF IVHAKSA GSHFP YSSNFRPIQVTEGTLSNQG*SLRATN+RAMACNIYRNVKLIAL*YARLTECSNQLI
Subject    250  RALICDSKEEVKGCKLFIFIKSLLGPISGWNPRLQMDVPHDFCIVHAKSAQGSHFPNYSSNFRPIQVTEGTLSNQG*SLRATNVRAMACNIYRNVKLIAL*YARLTECSNQLI  588

Range 3: 246 to 587 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
252.6 bits(545) 0.0 111/114(97%) 0/114(0%) Minus/Minus
Query        6  ALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRWIFHTIFA*YMQNLRMVVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSDMPDSPNARINSSM  347
                ALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRW+FHTIFA*YMQNLR VVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSDMPDSPNARINSS+
Subject    246  ALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRWMFHTIFA*YMQNLRRVVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSDMPDSPNARINSSI  587

Range 4: 251 to 589 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
246.7 bits(532) 0.0 106/113(94%) 0/113(0%) Minus/Minus
Query       11  ARSHL*LQGRSQRLQTFHSH*IPSWPN*RVESPSPDGYSTRFSHSTCKICAW*SLPLLFQQFQTYSGHRRDSFQSRLIFESYQHQSNGVQYLSQR*TDRSLICQTHRMLESTH  349
                ARSHL*LQGRSQRLQTFH H*IPSWPN*RVESPSPDG STRF HSTCKICA *SLP LFQQFQTYSGHRRDSFQSRLI ESYQ QSNGVQYLSQR*TDRSLICQTHRMLESTH
Subject    251  ARSHL*LQGRSQRLQTFHFH*IPSWPN*RVESPSPDGCSTRFLHSTCKICAG*SLP*LFQQFQTYSGHRRDSFQSRLISESYQRQSNGVQYLSQR*TDRSLICQTHRMLESTH  589

Range 5: 246 to 587 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
242.5 bits(523) 0.0 106/114(93%) 0/114(0%) Plus/Plus
Query        6  HR*VDSSIR*VWHIRERSV*RCDRYCTPLL*CW*LSKINLDWKESLL*PE*V*NCWNNKGSDYHAQILHVLCENRVEYPSGDGDSTR*LGQEGI**E*KVCSL*LLPWSHR*ER  347
                +R*VDSSIR*VWHIRERSV*RCDRYCTPLL* W*LS+INLDWKESLL*PE*V*NCWNN GSDY AQILHVLC+NRVE+PSGDGDSTR*LGQEGI**+*KVCSL*LLPWSHR*ER
Subject    246  NR*VDSSIR*VWHIRERSV*RCDRYCTPLL*RW*LSEINLDWKESLL*PE*V*NCWNN*GSDYPAQILHVLCKNRVEHPSGDGDSTR*LGQEGI**K*KVCSL*LLPWSHR*ER  587

Range 6: 251 to 589 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
239.3 bits(516) 0.0 107/113(95%) 0/113(0%) Plus/Plus
Query       11  MS*FEHSVSLAYQRAISLTLR*ILHAIALMLVALKDQP*LERVPSVT*IGLKLLE**GK*LPCADFACTMRKSCGISIWRRGFHPLIGPRRDLMRMKSLQPLTSSLESQMRAR  349
                MS*FEHSVSLAYQRAISLTLR*ILHAIAL LVAL+DQP*LERVPSVT*IGLKLLE* GK*LPCADFACTM+KSCG SIWRRGFHPLIGPRRDLM+MKSLQPLTSSLESQMRAR
Subject    251  MS*FEHSVSLAYQRAISLTLR*ILHAIALTLVALRDQP*LERVPSVT*IGLKLLE*LGK*LPCADFACTMQKSCGTSIWRRGFHPLIGPRRDLMKMKSLQPLTSSLESQMRAR  589

Rupestris stem pitting associated virus isolate A8.4 coat protein gene, complete cds

Sequence ID: AY927670.1 Length: 780 Number of Matches: 6

Range 1: 241 to 588 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
278.3 bits(601) 0.0 114/116(98%) 0/116(0%) Plus/Plus
Query        1  GCIDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTMRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESA  348
                G IDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTT+RRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESA
Subject    241  GAIDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESA  588

Range 2: 246 to 587 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
251.2 bits(542) 0.0 110/114(96%) 0/114(0%) Minus/Minus
Query        6  ALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRWIFHTIFA*YMQNLRMVVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSDMPDSPNARINSSM  347
                ALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRW+FHTIFA*YMQNLR VVTSLIIPAISDLF+SQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSDMPDSPNARINSS+
Subject    246  ALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRWMFHTIFA*YMQNLRRVVTSLIIPAISDLFKSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSDMPDSPNARINSSI  587

Range 3: 250 to 588 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
233.4 bits(503) 0.0 98/113(87%) 0/113(0%) Minus/Minus
Query       10  RALICDSKEEVKGCKLFILIKSLLGPISGWNPRLQMDIPHDFRIVHAKSAHGSHFPYYSSNFRPIQVTEGTLSNQG*SLRATNIRAMACNIYRNVKLIAL*YARLTECSNQLI  348
                RALICD+KEEVKGCKL I IKS LGPISGWNPRLQMD+PHDF IVHAKSA G +FPYYSSNFR IQVTEGTLS QG*SLRATNIRAMACNIY NV+LI L*YARL ECSNQLI
Subject    250  RALICDAKEEVKGCKLLIFIKSFLGPISGWNPRLQMDVPHDFCIVHAKSAQGGYFPYYSSNFRSIQVTEGTLSYQG*SLRATNIRAMACNIYCNVELITL*YARLAECSNQLI  588

Range 4: 251 to 589 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
221.5 bits(477) 0.0 97/113(86%) 0/113(0%) Minus/Minus
Query       11  ARSHL*LQGRSQRLQTFHSH*IPSWPN*RVESPSPDGYSTRFSHSTCKICAW*SLPLLFQQFQTYSGHRRDSFQSRLIFESYQHQSNGVQYLSQR*TDRSLICQTHRMLESTH  349
                ARSHL* QGRSQRLQT H H*I SWPN*RVESPSPDG STRF HSTCKICA   LPLLFQQFQ YS HRRDSF SRLIFESYQHQSNGVQYL QR* D SLICQT RMLESTH
Subject    251  ARSHL*RQGRSQRLQTSHFH*ILSWPN*RVESPSPDGCSTRFLHSTCKICAGWLLPLLFQQFQIYSSHRRDSFLSRLIFESYQHQSNGVQYLLQR*IDHSLICQTRRMLESTH  589

Range 5: 251 to 589 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
220.5 bits(475) 0.0 99/113(88%) 0/113(0%) Plus/Plus
Query       11  MS*FEHSVSLAYQRAISLTLR*ILHAIALMLVALKDQP*LERVPSVT*IGLKLLE**GK*LPCADFACTMRKSCGISIWRRGFHPLIGPRRDLMRMKSLQPLTSSLESQMRAR  349
                MS*FEHS SLAYQR I+ TL+*ILHAIALMLVALKDQP* ERVPSVT*I LKLLE**GK* PCADFACTM+KSCG SIWRRGFHPLIGPR+DLM+M+SLQPLTSSL SQMRAR
Subject    251  MS*FEHSASLAYQRVINSTLQ*ILHAIALMLVALKDQP**ERVPSVT*IDLKLLE**GK*PPCADFACTMQKSCGTSIWRRGFHPLIGPRKDLMKMRSLQPLTSSLASQMRAR  589

Range 6: 249 to 587 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
218.3 bits(470) 0.0 96/113(85%) 0/113(0%) Plus/Plus
Query        9  R*VDSSIR*VWHIRERSV*RCDRYCTPLL*CW*LSKINLDWKESLL*PE*V*NCWNNKGSDYHAQILHVLCENRVEYPSGDGDSTR*LGQEGI**E*KVCSL*LLPWSHR*ER  347
                R*VDSSIR VWHIRE S+ RC+RYCTPLL*CW*LSKINLD KESLL* E*+*NCWNNKGS++ AQILHVLC+NRVE+PSGDGDSTR*LGQE I**+*+VCSL*LLPW HR*ER
Subject    249  R*VDSSIRRVWHIRE*SIQRCNRYCTPLL*CW*LSKINLDRKESLL*LE*I*NCWNNKGSNHPAQILHVLCKNRVEHPSGDGDSTR*LGQERI**K*EVCSL*LLPWRHR*ER  587

Rupestris stem pitting associated virus isolate M37 12 coat protein gene, complete cds

Sequence ID: AY927675.1 Length: 780 Number of Matches: 6

Range 1: 241 to 588 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
278.3 bits(601) 0.0 114/116(98%) 0/116(0%) Plus/Plus
Query        1  GCIDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTMRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESA  348
                G IDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTT+RRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESA
Subject    241  GAIDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESA  588

Range 2: 251 to 589 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
255.4 bits(551) 0.0 108/113(96%) 0/113(0%) Minus/Minus
Query       11  ARSHL*LQGRSQRLQTFHSH*IPSWPN*RVESPSPDGYSTRFSHSTCKICAW*SLPLLFQQFQTYSGHRRDSFQSRLIFESYQHQSNGVQYLSQR*TDRSLICQTHRMLESTH  349
                ARSHL* QGRSQRLQTFH H*IPSWPN*RVESPSPDGYSTRF HSTCKICA *SLPLLFQQFQTYSGHRRDSFQSRLIFESYQH SNGVQYLSQR*TDRSLICQTHRMLESTH
Subject    251  ARSHL*PQGRSQRLQTFHFH*IPSWPN*RVESPSPDGYSTRFLHSTCKICAG*SLPLLFQQFQTYSGHRRDSFQSRLIFESYQHLSNGVQYLSQR*TDRSLICQTHRMLESTH  589

Range 3: 250 to 588 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
254.9 bits(550) 0.0 108/113(96%) 0/113(0%) Minus/Minus
Query       10  RALICDSKEEVKGCKLFILIKSLLGPISGWNPRLQMDIPHDFRIVHAKSAHGSHFPYYSSNFRPIQVTEGTLSNQG*SLRATNIRAMACNIYRNVKLIAL*YARLTECSNQLI  348
                RALICD KEEVKGCKLFI IKSLLGPISGWNPRLQMDIPHDF IVHAKSA GSHFPYYSSNFRPIQVTEGTLSNQG*SLRATNI AMACNIYRNVKLIAL*YARLTECSNQLI
Subject    250  RALICDPKEEVKGCKLFIFIKSLLGPISGWNPRLQMDIPHDFCIVHAKSAQGSHFPYYSSNFRPIQVTEGTLSNQG*SLRATNI*AMACNIYRNVKLIAL*YARLTECSNQLI  588

Range 4: 246 to 587 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
254.0 bits(548) 0.0 112/114(98%) 0/114(0%) Minus/Minus
Query        6  ALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRWIFHTIFA*YMQNLRMVVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSDMPDSPNARINSSM  347
                ALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRWIFHTIFA*YMQNLR VVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSDMPDSPNARINSS+
Subject    246  ALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRWIFHTIFA*YMQNLRRVVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSDMPDSPNARINSSI  587

Range 5: 246 to 587 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
252.2 bits(544) 0.0 108/114(95%) 0/114(0%) Plus/Plus
Query        6  HR*VDSSIR*VWHIRERSV*RCDRYCTPLL*CW*LSKINLDWKESLL*PE*V*NCWNNKGSDYHAQILHVLCENRVEYPSGDGDSTR*LGQEGI**E*KVCSL*LLPWSHR*ER  347
                +R*VDSSIR*VWHIRERSV*RCDRYCTPLL CW*LSKINLDWKESLL*PE*V*NCWNNKGSDY AQILHVLC+NRVEYPSGDGDSTR*LGQEGI**+*KVCSL*LLPW HR*ER
Subject    246  NR*VDSSIR*VWHIRERSV*RCDRYCTPLLRCW*LSKINLDWKESLL*PE*V*NCWNNKGSDYPAQILHVLCKNRVEYPSGDGDSTR*LGQEGI**K*KVCSL*LLPWGHR*ER  587

Range 6: 251 to 589 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
242.1 bits(522) 0.0 109/113(96%) 0/113(0%) Plus/Plus
Query       11  MS*FEHSVSLAYQRAISLTLR*ILHAIALMLVALKDQP*LERVPSVT*IGLKLLE**GK*LPCADFACTMRKSCGISIWRRGFHPLIGPRRDLMRMKSLQPLTSSLESQMRAR  349
                MS*FEHSVSLAYQRAISLTLR*ILHAIA MLVALKDQP*LERVPSVT*IGLKLLE**GK*LPCADFACTM+KSCGISIWRRGFHPLIGPRRDLM+MKSLQPLTSSL SQMRAR
Subject    251  MS*FEHSVSLAYQRAISLTLR*ILHAIAQMLVALKDQP*LERVPSVT*IGLKLLE**GK*LPCADFACTMQKSCGISIWRRGFHPLIGPRRDLMKMKSLQPLTSSLGSQMRAR  589

Nucleotide Sequence (675 letters)

Query ID:ds2016-132_4
Query definition:No definition line
Query length:951
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 16 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
68
136
204
272
340
408
476
544
612
675

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome

Sequence ID: KR054734.1 Length: 8753 Number of Matches: 9

Range 1: 5332 to 5988 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
496.8 bits(1078) 0.0 215/219(98%) 0/219(0%) Plus/Plus
Query        3  GELLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVNMFNEAVQEFEXXXXXXXXXTIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVKARNFTGICTESDYEAFDASQDHFILSFELQVMRFLGLP  659
                GE LSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVNMFNEAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVKAR FTG+CTESDYEAFDASQDHFIL+FELQVMRFLGLP
Subject   5332  GEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVNMFNEAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVKARGFTGVCTESDYEAFDASQDHFILAFELQVMRFLGLP  5988

Range 2: 5339 to 5956 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
381.4 bits(826) 0.0 167/206(81%) 0/206(0%) Minus/Minus
Query       10  QMTR*SDPERHQMPHNLILCKCL*SFAL*PIH*VHQDLYQSECKNSVLKLA*ASFQCTSYKEQNEPKLHVESRPKFAQP*LPLIYCQILYNVGIS*KLKRHLVANPDMTCLNDSL*LQHFC*PFWLQTPELPH*TY*HCG*HSMELLTKMCQAETFHKALHALASQPPLVALKTLNASGQPLKK*WNHYPYV*GKCFQIFHKHCLI  627
                QM  *+D   HQ  H+LIL   L*+  L*PIH  HQDL Q+EC+N V   A*ASFQC + + Q+EP+  VESRPKFAQP* P IYCQILYNVGIS*KLKRHLVANPDMTCLNDSL*LQHFC*PF LQTPELPH*TY*HCG*HSMELLTKMCQAE FHKAL ALA QPPLVALKTLNASGQPLKK*WNHYPYV*GKCFQIFHKHCLI
Subject   5339  QMPG*NDLGMHQKLHSLILYTHL*NL*L*PIHLAHQDLCQNECRNLVSMPA*ASFQCIACRVQSEPRRRVESRPKFAQP*PPSIYCQILYNVGIS*KLKRHLVANPDMTCLNDSL*LQHFC*PF*LQTPELPH*TY*HCG*HSMELLTKMCQAEIFHKALRALALQPPLVALKTLNASGQPLKK*WNHYPYV*GKCFQIFHKHCLI  5956

Range 3: 5336 to 5989 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
374.0 bits(810) 0.0 175/218(80%) 0/218(0%) Plus/Plus
Query        7  SY*AMLVKDLKAFTLDIRVMIPSLF*WLSGSV*SFQSHKWRLRS*GVQSLMESFCLTHFCQKFH*MLATMSICSMRQFRSLKPKRLAKVLQL*RIIQAGHVGIGY*MSL*FS*NPNIVQNLTID*G*LRLGKLWPAFNMQFWFVLLLI*GTLKRSSCKL*NRIFTFTLVKVLMNLMNGLKRETLQAFAQNQIMRHLMPLRITSSCHLSCK*CGF*GCQ  660
                S *AMLVKDLKAFTLDIRVMIPSLF*WLSGSV*SFQSHKWRL+S*G QSLME+FCLTHFCQKFH*MLATMSICSMRQFRSLK KRLAKVLQL*RIIQAGHVGIGY*MSL*FS*NPNIVQNLTID*G LRLGKLWPAFN   WF L     TLKRS C+ *N+I TF L KVLM+ MNGLK E  Q   QNQ M+ LM  +I SS HL+CK   F* CQ
Subject   5336  SN*AMLVKDLKAFTLDIRVMIPSLF*WLSGSV*SFQSHKWRLQS*GAQSLMENFCLTHFCQKFH*MLATMSICSMRQFRSLKLKRLAKVLQL*RIIQAGHVGIGY*MSL*FS*NPNIVQNLTID*GWLRLGKLWPAFNTPSWFALHPTCDTLKRSLCRH*NQISTFILAKVLMS*MNGLKLEVSQVCVQNQTMKLLMHPKIISSWHLNCKL*DF*DCQ  5989

Range 4: 5470 to 5988 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
305.8 bits(661) 0.0 134/173(77%) 0/173(0%) Minus/Minus
Query      141  WQP*KPHYLQLK*QDEVILRGIKCLII*FCANACKVSRFNPFIKFIKTFTRVNVKIRF*SLHELLFNVPHIRSKTNQNCMLKAGQSLPSLSYP*SIVKFCTMLGFHEN*SDI**PIPT*PA*MILYSCSTFASLFGFKLLNCLIEHIDIVASIQWNF*QKCVKQKLSIRLCTP  659
                WQ *K H LQ K QDE+IL  IK  I+*FC + C+ S FNPFI  IKTF R+NV+I F  LH+LLFNV H+  K NQ+ +LKAGQSLPSLS+P SIVKFCTMLGFHEN*SDI**PIPT*PA*MILYSCSTFASLF FKLLNCLIEHIDIVASIQWNF*QKCVKQK SIRLC P
Subject   5470  WQS*KSHNLQFKCQDEMILGCIKSFIV*FCTHTCETSSFNPFI*LIKTFARMNVEIWFQCLHKLLFNVSHVGCKANQDGVLKAGQSLPSLSHPQSIVKFCTMLGFHEN*SDI**PIPT*PA*MILYSCSTFASLFSFKLLNCLIEHIDIVASIQWNF*QKCVKQKFSIRLCAP  5988

Range 5: 5341 to 5424 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.9 bits(131) 0.0 28/28(100%) 0/28(0%) Minus/Minus
Query       12  PDSH*KSDGIITLMSRVNAFKSFTSIA*  95
                PDSH*KSDGIITLMSRVNAFKSFTSIA*
Subject   5341  PDSH*KSDGIITLMSRVNAFKSFTSIA*  5424

Range 6: 5601 to 5996 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
203.1 bits(437) 0.0 90/132(68%) 0/132(0%) Plus/Plus
Query      272  CCNYRESFRQVMSGLATRCRFNFHEIPTLYKI*Q*IKGS*GWANFGLLSTCSFGSFCSLYEVH*KEAHASFKTEFLHSLW*RS**T**MG*SAKLYRHLHRIRL*GI*CLSGSLHLVI*VASNAVFRVAKHT  667
                CCNYRESFRQVMSGLATRCRFNFHEIPTLYKI*Q*I+G *GWANFGLLST   GS C+L+ +H*KEA+A  +T+FLHS W RS**  *MG*S + +R ++RIRL*  *C+  S H  I* AS  +FR A+ +
Subject   5601  CCNYRESFRQVMSGLATRCRFNFHEIPTLYKI*Q*IEGG*GWANFGLLSTRRLGSLCTLHAIH*KEAYAGIETKFLHSFWQRS**AK*MG*S*RFHRCVYRIRL*SF*CIPRSFHPGI*TASYEIFRTARRS  5996

Range 7: 5340 to 5552 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
161.9 bits(347) 0.0 68/71(96%) 0/71(0%) Plus/Plus
Query       11  IKQCL*KI*KHLP*T*G**FHHFFNGCPEAFKVFKATSGGCEAKACKALWKVSA*HIFVKSSIEC*PQCQY  223
                IKQCL*KI*KHLP*T*G**FHHFFNGCPEAFKVFKATSGGC+AKA KALWK+SA*HIFVKSSIEC*PQCQY
Subject   5340  IKQCL*KI*KHLP*T*G**FHHFFNGCPEAFKVFKATSGGCKAKARKALWKISA*HIFVKSSIEC*PQCQY  5552

Range 8: 5619 to 5987 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
216.9 bits(467) 0.0 106/123(86%) 0/123(0%) Minus/Minus
Query      290  GNPKNRITCNSNDKMK*XXXXXXXXXXXSVQMPVKFRALTHSLSSSRPLPE*M*KFGFKACMSFFSMYLI*GAKRTKTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE*  658
                G+PKN ITC+SN +MK*S +AS AS*SDSV  PVK  ALTHS SSSRPLPE*M*KFGF AC+SFFSMY +*GAKRTKTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE*
Subject   5619  GSPKNLITCSSNARMK*SWDASKAS*SDSVHTPVKPLALTHSFSSSRPLPE*M*KFGFNACISFFSMYRM*GAKRTKTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE*  5987

Range 9: 5370 to 5540 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
137.6 bits(294) 0.0 57/57(100%) 0/57(0%) Minus/Minus
Query       41  WLAFNGTFDKNVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*M  211
                WLAFNGTFDKNVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*M
Subject   5370  WLAFNGTFDKNVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*M  5540

Grapevine rupestris stem pitting associated virus isolate CS BR, complete genome

Sequence ID: KX958435.1 Length: 8743 Number of Matches: 10

Range 1: 5333 to 5989 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
492.7 bits(1069) 0.0 212/219(97%) 0/219(0%) Plus/Plus
Query        3  GELLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVNMFNEAVQEFEXXXXXXXXXTIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVKARNFTGICTESDYEAFDASQDHFILSFELQVMRFLGLP  659
                GE LSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVNMF+EAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWV+AR FTG+CTESDYEAFDASQDHFIL+FELQ+MRFLGLP
Subject   5333  GEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVNMFHEAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVRARGFTGVCTESDYEAFDASQDHFILAFELQIMRFLGLP  5989

Range 2: 5620 to 5901 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
192.1 bits(413) 0.0 84/94(89%) 0/94(0%) Minus/Minus
Query      290  VQMPVKFRALTHSLSSSRPLPE*M*KFGFKACMSFFSMYLI*GAKRTKTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE*  571
                V  PVK  ALTHS SSSRPLPE*+*K GF ACMSFFSMY +*GAKRTKTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE*
Subject   5620  VHTPVKPLALTHSFSSSRPLPE*I*KLGFNACMSFFSMYRM*GAKRTKTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE*  5901

Range 3: 5371 to 5541 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
132.1 bits(282) 0.0 54/57(95%) 0/57(0%) Minus/Minus
Query       41  WLAFNGTFDKNVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*M  211
                WLAFNGTFD+ VSSRNFP*GFARLSFAASTCGFENF+RFRTAIKKVMESLPLCLG*M
Subject   5371  WLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFRRFRTAIKKVMESLPLCLG*M  5541

Range 4: 5941 to 5988 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.9 bits(59) 0.0 11/16(69%) 0/16(0%) Minus/Minus
Query      611  GNPKNRITCNSNDKMK  658
                G+PKN I C+SN KMK
Subject   5941  GSPKNLIICSSNAKMK  5988

Range 5: 5340 to 5957 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
293.4 bits(634) 0.0 135/206(66%) 0/206(0%) Minus/Minus
Query       10  QMTR*SDPERHQMPHNLILCKCL*SFAL*PIH*VHQDLYQSECKNSVLKLA*ASFQCTSYKEQNEPKLHVESRPKFAQP*LPLIYCQILYNVGIS*KLKRHLVANPDMTCLNDSL*LQHFC*PFWLQTPELPH*TY*HCG*HSMELLTKMCQAETFHKALHALASQPPLVALKTLNASGQPLKK*WNHYPYV*GKCFQIFHKHCLI  627
                QM R*+ P  HQ  H+L LC  L*+   *PIH  HQDL  SE ++ V  LA*ASFQC + K Q+EPK   ESRPKFAQP* PLIYCQILYNVGIS*+LK+HL ANP MTCL+D   LQHFC*P   QTP LPH TY*HCG*H M L    CQA   HKALHALASQ P VALKT    G+PLK+*W+H P V* KCFQ  H+HCLI
Subject   5340  QMPR*NGPGMHQKLHSLTLCIHL*NLLP*PIHLAHQDLCLSEYRSWVSMLA*ASFQCIACKVQSEPKQRAESRPKFAQP*PPLIYCQILYNVGIS*RLKQHLAANPGMTCLSDFQWLQHFC*PSLPQTPALPHETY*HCG*HLMGLSIGKCQAGISHKALHALASQLPPVALKTSGVFGRPLKR*WSHCPCV*DKCFQNVHRHCLI  5957

Range 6: 5337 to 5990 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
282.4 bits(610) 0.0 142/218(65%) 0/218(0%) Plus/Plus
Query        7  SY*AMLVKDLKAFTLDIRVMIPSLF*WLSGSV*SFQSHKWRLRS*GVQSLMESFCLTHFCQKFH*MLATMSICSMRQFRSLKPKRLAKVLQL*RIIQAGHVGIGY*MSL*FS*NPNIVQNLTID*G*LRLGKLWPAFNMQFWFVLLLI*GTLKRSSCKL*NRIFTFTLVKVLMNLMNGLKRETLQAFAQNQIMRHLMPLRITSSCHLSCK*CGF*GCQ  660
                S *AM V  LKAF LD R M P  F*W S + *SFQSH+W+LRS*GVQSLM + CLT   +K H*MLATM IC MRQ RSL+ +RLAKVLQ  +I QAGH GIG *M L* S*NPNIVQNLTID*G LRLGKLWPAF+  FWF L L   TLKRSSCK *N    FT  KVLM+ MNGL +E  Q +AQ+Q M+ LM  R  SS HL+CK   F* CQ
Subject   5337  SN*AMPVNVLKAFILDTRAMTPLPF*WPSENA*SFQSHRWKLRS*GVQSLMGNSCLTLSYRKSH*MLATMLICFMRQCRSLRQRRLAKVLQPLKITQAGHAGIGC*MLL*SS*NPNIVQNLTID*GWLRLGKLWPAFSTLFWFALHLTCDTLKRSSCKH*NPTSIFTQAKVLMS*MNGLGQEVSQVYAQSQTMKLLMHPRTISSWHLNCKL*DF*DCQ  5990

Range 7: 5471 to 5989 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
250.3 bits(540) 0.0 113/173(65%) 0/173(0%) Minus/Minus
Query      141  WQP*KPHYLQLK*QDEVILRGIKCLII*FCANACKVSRFNPFIKFIKTFTRVNVKIRF*SLHELLFNVPHIRSKTNQNCMLKAGQSLPSLSYP*SIVKFCTMLGFHEN*SDI**PIPT*PA*MILYSCSTFASLFGFKLLNCLIEHIDIVASIQWNF*QKCVKQKLSIRLCTP  659
                WQ *K H LQ K QDE++L  IK  I+* CA  C+ S  NPFI  IKTF  VN+++ F  LHELLFNV H+R K NQN +LKAGQSLPSLS+P*SIVKFCTMLGFHE+*S+I* PIP *PA*+I   CSTFASL   KLL+CL++HI+IVASI W+F  + VKQ+  IRLCTP
Subject   5471  WQS*KSHNLQFKCQDEMVLGCIKSFIV*LCAYTCETSCPNPFI*LIKTFA*VNIEVGFQCLHELLFNVSHVRCKANQNSVLKAGQSLPSLSHP*SIVKFCTMLGFHED*SNI*QPIPA*PA*VIFNGCSTFASLLCLKLLHCLMKHINIVASI*WDFR*ESVKQEFPIRLCTP  5989

Range 8: 5342 to 5422 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.5 bits(93) 0.0 18/27(67%) 0/27(0%) Minus/Minus
Query       12  DSH*KSDGIITLMSRVNAFKSFTSIA*  92
                D H*K +G+I L+SR+NAFK+FT IA*
Subject   5342  DGH*KGNGVIALVSRINAFKTFTGIA*  5422

Range 9: 5602 to 5997 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
183.9 bits(395) 0.0 82/132(62%) 0/132(0%) Plus/Plus
Query      272  CCNYRESFRQVMSGLATRCRFNFHEIPTLYKI*Q*IKGS*GWANFGLLSTCSFGSFCSLYEVH*KEAHASFKTEFLHSLW*RS**T**MG*SAKLYRHLHRIRL*GI*CLSGSLHLVI*VASNAVFRVAKHT  667
                CCN+ +S RQVM GLA RC FN HEIPTLYKI*Q*IKG *GWANFGLLS   FGS C+L+ +H*KEAHAS +T+ L+SL  RS**  *MG*  + +R +HR+RL*  *C+ G  HL I* A+  +FR A+ +
Subject   5602  CCNH*KSLRQVMPGLAARCCFNLHEIPTLYKI*Q*IKGG*GWANFGLLSARCFGSLCTLHAIH*KEAHASIETQLLYSLRQRS**AK*MG*GKRFHRCMHRVRL*SF*CIPGPFHLGI*TANYEIFRTARRS  5997

Range 10: 5341 to 5553 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.9 bits(227) 0.0 46/71(65%) 0/71(0%) Plus/Plus
Query       11  IKQCL*KI*KHLP*T*G**FHHFFNGCPEAFKVFKATSGGCEAKACKALWKVSA*HIFVKSSIEC*PQCQY  223
                IKQCL*  *KHL *T G * H+ FNG P+  +VFKAT G CEAKACKALW++ A*H  ++S I+C*PQC Y
Subject   5341  IKQCL*TF*KHLS*TQGQ*LHYLFNGRPKTPEVFKATGGSCEAKACKALWEIPA*HFPIESPIKC*PQC*Y  5553

Grapevine rupestris stem pitting associated virus isolate VF1, partial genome

Sequence ID: KT948710.1 Length: 8716 Number of Matches: 10

Range 1: 5333 to 5989 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
489.1 bits(1061) 0.0 210/219(96%) 0/219(0%) Plus/Plus
Query        3  GELLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVNMFNEAVQEFEXXXXXXXXXTIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVKARNFTGICTESDYEAFDASQDHFILSFELQVMRFLGLP  659
                GE LSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPL+ASHN NMF+EAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWV+AR+FTG+CTESDYEAFDASQDHFIL+FELQ+MRFLGLP
Subject   5333  GEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLSASHNTNMFHEAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVRARDFTGVCTESDYEAFDASQDHFILAFELQIMRFLGLP  5989

Range 2: 5620 to 5901 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
196.3 bits(422) 0.0 85/94(90%) 0/94(0%) Minus/Minus
Query      290  VQMPVKFRALTHSLSSSRPLPE*M*KFGFKACMSFFSMYLI*GAKRTKTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE*  571
                V  PVK  ALTHS SSSRPLPE*M*K GF ACMSFFSMYL+*GAKRTKTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSS+QSRHDLPE*
Subject   5620  VHTPVKSLALTHSFSSSRPLPE*M*KLGFNACMSFFSMYLM*GAKRTKTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSNQSRHDLPE*  5901

Range 3: 5371 to 5541 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.9 bits(275) 0.0 53/57(93%) 0/57(0%) Minus/Minus
Query       41  WLAFNGTFDKNVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*M  211
                WLA NGTFD+ VSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKV+ESLPLCLG*M
Subject   5371  WLALNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVIESLPLCLG*M  5541

Range 4: 5941 to 5988 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.6 bits(56) 0.0 10/16(62%) 0/16(0%) Minus/Minus
Query      611  GNPKNRITCNSNDKMK  658
                G+PKN + C+SN KMK
Subject   5941  GSPKNLMICSSNAKMK  5988

Range 5: 5337 to 5990 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
285.2 bits(616) 0.0 142/218(65%) 0/218(0%) Plus/Plus
Query        7  SY*AMLVKDLKAFTLDIRVMIPSLF*WLSGSV*SFQSHKWRLRS*GVQSLMESFCLTHFCQKFH*MLATMSICSMRQFRSLKPKRLAKVLQL*RIIQAGHVGIGY*MSL*FS*NPNIVQNLTID*G*LRLGKLWPAFNMQFWFVLLLI*GTLKRSSCKL*NRIFTFTLVKVLMNLMNGLKRETLQAFAQNQIMRHLMPLRITSSCHLSCK*CGF*GCQ  660
                S *AMLV  L+AF LDIR M  S F*W SG+ *S QSH+W+LRS*GVQSLM + CLT   QK H*+LAT+ ICSMRQFRSLK +R AKVLQ  +I QAGHVGIG *M L* S*NPNI QNLTID*G  RLG+LWPAF+  FWF L L * TLKRSSCK *N   TFT  KVL + MNGL +E  Q +AQ++ M+ LM  R  SS HL+CK   F* CQ
Subject   5337  SN*AMLVNVLRAFILDIRAMTLSPF*WPSGNA*SSQSHRWKLRS*GVQSLMGNSCLTPSYQKSH*VLATIPICSMRQFRSLKQRRRAKVLQPLKITQAGHVGIGC*MLL*SS*NPNIAQNLTID*GWPRLGRLWPAFSTPFWFALHLT*DTLKRSSCKR*NPTSTFTQAKVLTS*MNGLGQEISQVYAQSRTMKLLMHPRTISSWHLNCKS*DF*DCQ  5990

Range 6: 5340 to 5957 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
276.9 bits(598) 0.0 130/206(63%) 0/206(0%) Minus/Minus
Query       10  QMTR*SDPERHQMPHNLILCKCL*SFAL*PIH*VHQDLYQSECKNSVLKLA*ASFQCTSYKEQNEPKLHVESRPKFAQP*LPLIYCQILYNVGIS*KLKRHLVANPDMTCLNDSL*LQHFC*PFWLQTPELPH*TY*HCG*HSMELLTKMCQAETFHKALHALASQPPLVALKTLNASGQPLKK*WNHYPYV*GKCFQIFHKHCLI  627
                QM R*+ P  HQ  H+  LC  L*+   *PIH   QDL  SEC++ V  LA*ASFQC S K Q+EPK   ESRPK AQP  PLIYCQIL NVGIS*+LK+HL  NPDMTCL+D   LQHFC P  LQTPELPH TY +CG*H M LL   CQA   HKALHALASQ P VAL+T + SG+P K+* +H PYV* KC Q  HKHC I
Subject   5340  QMPR*NGPGMHQKLHSPTLCIHL*NLLP*PIHLARQDLCLSECRSWVSTLA*ASFQCISCKVQSEPKRRAESRPKSAQPWPPLIYCQILCNVGIS*RLKQHLATNPDMTCLSDFQWLQHFCSPSLLQTPELPHGTYWYCG*HLMGLLIGRCQAGISHKALHALASQLPPVALRTSSVSGRPSKR**SHCPYV*DKCSQNVHKHCSI  5957

Range 7: 5471 to 5989 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
249.0 bits(537) 0.0 113/173(65%) 0/173(0%) Minus/Minus
Query      141  WQP*KPHYLQLK*QDEVILRGIKCLII*FCANACKVSRFNPFIKFIKTFTRVNVKIRF*SLHELLFNVPHIRSKTNQNCMLKAGQSLPSLSYP*SIVKFCTMLGFHEN*SDI**PIPT*PA*MILYSCSTFASLFGFKLLNCLIEHIDIVASIQWNF*QKCVKQKLSIRLCTP  659
                WQ *K H LQ K QDE++L  IK  I+  CA  C++S  NPFI  +KTF  VNV++ F  LHELLFNV H+R K NQN +LKAGQSLPSL +P*SIVKFC MLGFHE+*S+I* PIPT*PA*+I   CSTFA L  FKLLNCL+EHI IVAS  W+F* + VKQ+  IRLCTP
Subject   5471  WQS*KSHDLQFKCQDEMVLGCIKSFIVRLCAYTCEISCPNPFI*LVKTFA*VNVEVGFQRLHELLFNVSHVRCKANQNGVLKAGQSLPSLGHP*SIVKFCAMLGFHED*SNI*QPIPT*PA*VIFNGCSTFARLLCFKLLNCLMEHIGIVAST*WDF**EGVKQEFPIRLCTP  5989

Range 8: 5345 to 5425 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.5 bits(93) 0.0 18/27(67%) 0/27(0%) Minus/Minus
Query       15  PDSH*KSDGIITLMSRVNAFKSFTSIA  95
                PD H K D +I LMSR+NA K+FTSIA
Subject   5345  PDGHQKGDRVIALMSRINALKTFTSIA  5425

Range 9: 5602 to 5997 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
178.4 bits(383) 0.0 79/132(60%) 0/132(0%) Plus/Plus
Query      272  CCNYRESFRQVMSGLATRCRFNFHEIPTLYKI*Q*IKGS*GWANFGLLSTCSFGSFCSLYEVH*KEAHASFKTEFLHSLW*RS**T**MG*SAKLYRHLHRIRL*GI*CLSGSLHLVI*VASNAVFRVAKHT  667
                CCN+ +S RQVMSGL  RC FN HEIPTL+KI*Q*IKG  GWA+FGLLS   FGS C+L+E+H*KEAHAS +T+ LHSL  RS*   *MG*  + +R +HR+ L*  *C+ G  HL I* A++ +FR A+ +
Subject   5602  CCNH*KSLRQVMSGLVARCCFNLHEIPTLHKI*Q*IKGGQGWADFGLLSARRFGSLCTLHEIH*KEAHASVETQLLHSLRQRS*RAK*MG*GKRFHRCMHRVGL*SF*CIPGPFHLGI*TANHEIFRTARRS  5997

Range 10: 5341 to 5553 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.0 bits(225) 0.0 45/71(63%) 0/71(0%) Plus/Plus
Query       11  IKQCL*KI*KHLP*T*G**FHHFFNGCPEAFKVFKATSGGCEAKACKALWKVSA*HIFVKSSIEC*PQCQY  223
                I+QCL*  *+HL *T*G * +H F+G PE  +V KAT G CEAKACKALW++ A*H+ +KS I+C*PQ QY
Subject   5341  IEQCL*TF*EHLS*T*GQ*LYHLFDGRPETLEVLKATGGSCEAKACKALWEIPA*HLPIKSPIKC*PQYQY  5553

Rupestris stem pitting associated virus isolate RSPaV PN, complete genome

Sequence ID: AY368172.2 Length: 8743 Number of Matches: 10

Range 1: 5332 to 5988 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
488.1 bits(1059) 0.0 209/219(95%) 0/219(0%) Plus/Plus
Query        3  GELLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVNMFNEAVQEFEXXXXXXXXXTIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVKARNFTGICTESDYEAFDASQDHFILSFELQVMRFLGLP  659
                GE LSNACERFESIYPRHKGNDS+TFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLD FLSKVPLNA HNVNMF+EAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRL+VAKAGQTLACFQHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVKAR FTG+CTESDYEAFDASQDHFIL+FELQ+MRFLGLP
Subject   5332  GEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDAFLSKVPLNAGHNVNMFHEAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLKVAKAGQTLACFQHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVKARGFTGVCTESDYEAFDASQDHFILAFELQIMRFLGLP  5988

Range 2: 5622 to 5900 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
185.3 bits(398) 0.0 79/93(85%) 0/93(0%) Minus/Minus
Query      293  VQMPVKFRALTHSLSSSRPLPE*M*KFGFKACMSFFSMYLI*GAKRTKTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE  571
                VQ PVK  A THS SSSRPLPE*M*K GF AC+SFFS+YL+*GAKRT+TAC*KQAKVCPALAT NLLSNFVQCWDFMKIKATSS+QS HDLPE
Subject   5622  VQTPVKPLAFTHSFSSSRPLPE*M*KLGFNACISFFSIYLM*GAKRTRTAC*KQAKVCPALATFNLLSNFVQCWDFMKIKATSSNQSLHDLPE  5900

Range 3: 5370 to 5540 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
117.5 bits(250) 0.0 48/57(84%) 0/57(0%) Minus/Minus
Query       41  WLAFNGTFDKNVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*M  211
                W AF GTFDKN SS+NFP*GFARL+FAASTCG ENFKRFRTAIK V ES PLCLG*M
Subject   5370  WPAFKGTFDKNASSKNFP*GFARLNFAASTCGLENFKRFRTAIKNVTESFPLCLG*M  5540

Range 4: 5937 to 5987 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.6 bits(56) 0.0 11/17(65%) 0/17(0%) Minus/Minus
Query      608  GNPKNRITCNSNDKMK*  658
                G PKN I C+SN +MK*
Subject   5937  GKPKNLIICSSNARMK*  5987

Range 5: 5336 to 5989 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
265.0 bits(572) 0.0 135/218(62%) 0/218(0%) Plus/Plus
Query        7  SY*AMLVKDLKAFTLDIRVMIPSLF*WLSGSV*SFQSHKWRLRS*GVQSLMESFCLTHFCQKFH*MLATMSICSMRQFRSLKPKRLAKVLQL*RIIQAGHVGIGY*MSL*FS*NPNIVQNLTID*G*LRLGKLWPAFNMQFWFVLLLI*GTLKRSSCKL*NRIFTFTLVKVLMNLMNGLKRETLQAFAQNQIMRHLMPLRITSSCHLSCK*CGF*GCQ  660
                S *AMLVKDL+AFTL IR MI S  *W S SV*+F SHK + +S*GVQ+LME+FCLTH CQ++ *MLATMS C MRQF+SLK +RLA+V   *+  QAGH  IGY*  L* S*NPNI Q+LTID*  LRLGKLWP FNM  W      *G LKR+ CK *+  FTF   K  MN M+G K E LQ FAQ+Q M+ LM LRI S   L+CK  GF  CQ
Subject   5336  SS*AMLVKDLRAFTLGIREMILSHS*WQSESV*NFLSHKLKRQS*GVQNLMENFCLTHSCQRYL*MLATMSTCFMRQFKSLKQRRLARVQLP*KTTQAGHAEIGY*T*L*SS*NPNIAQSLTID*RWLRLGKLWPVFNMLSWSASRPT*GILKRNLCKH*SLTFTFIQAKASMN*MSG*KLEVLQVFAQSQTMKPLMRLRIISFWRLNCKL*GFWVCQ  5989

Range 6: 5470 to 5988 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
243.0 bits(524) 0.0 106/173(61%) 0/173(0%) Minus/Minus
Query      141  WQP*KPHYLQLK*QDEVILRGIKCLII*FCANACKVSRFNPFIKFIKTFTRVNVKIRF*SLHELLFNVPHIRSKTNQNCMLKAGQSLPSLSYP*SIVKFCTMLGFHEN*SDI**PIPT*PA*MILYSCSTFASLFGFKLLNCLIEHIDIVASIQWNF*QKCVKQKLSIRLCTP  659
                WQ  KPH LQ K Q+E+ILR IK  I+* CAN CK S F+P I+FI+ F  +NVK+R   LH+ LFN+PH+  + +Q+ MLK GQSLPSLS+ *SIVK C MLGFHE+ S +**PI  *PA*++ Y   T ASL  FKLLNCL++H+DIVASIQ   *Q+CVKQK SIR CTP
Subject   5470  WQTQKPHNLQFKRQNEMILRRIKGFIV*LCANTCKTSSFHPLIQFIEAFA*MNVKVRLQCLHKFLFNIPHVGREADQDSMLKTGQSLPSLSHL*SIVKLCAMLGFHEDQSYV**PISA*PA*VVFYGSCTLASLLCFKLLNCLMKHVDIVASIQRYL*QECVKQKFSIRFCTP  5988

Range 7: 5344 to 5421 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.0 bits(81) 0.0 18/26(69%) 0/26(0%) Minus/Minus
Query       15  DSH*KSDGIITLMSRVNAFKSFTSIA  92
                D H + D II+LM RVNA KSFTSIA
Subject   5344  DCHQECDRIISLMPRVNALKSFTSIA  5421

Range 8: 5345 to 5956 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
244.4 bits(527) 0.0 119/204(58%) 0/204(0%) Minus/Minus
Query       16  QMTR*SDPERHQMPHNLILCKCL*SFAL*PIH*VHQDLYQSECKNSVLKLA*ASFQCTSYKEQNEPKLHVESRPKFAQP*LPLIYCQILYNVGIS*KLKRHLVANPDMTCLNDSL*LQHFC*PFWLQTPELPH*TY*HCG*HSMELLTKMCQAETFHKALHALASQPPLVALKTLNASGQPLKK*WNHYPYV*GKCFQIFHKHC  627
                Q   *+DPE HQ  H+L LCK L*+  L P H VH+ L  +ECK+    LA* SFQ TS + ++ P  HVE+RPKFAQP* PLIYCQ L NVGIS*+ K  LV N  MTCL+  L   H C*P  LQT ELPH T *HCG HS   LT+M QA+ FHK LHA      LVA K LNA G P + * NH+PY *GKC QIFHKHC
Subject   5345  QTPE*NDPETHQRLHSLTLCKHL*NL*LSPTHSVHRGLCLNECKS*ASMLA*VSFQYTSCRARSGPGQHVENRPKFAQP*PPLIYCQTLCNVGIS*RSKLRLVTNLCMTCLSGFLW*LHSC*PSLLQTLELPHETC*HCGQHSKVPLTRMRQAKIFHKVLHASTLPLQLVA*KILNAFGLPSRM*QNHFPYA*GKCSQIFHKHC  5956

Range 9: 5601 to 5996 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
146.3 bits(313) 0.0 71/132(54%) 0/132(0%) Plus/Plus
Query      272  CCNYRESFRQVMSGLATRCRFNFHEIPTLYKI*Q*IKGS*GWANFGLLSTCSFGSFCSLYEVH*KEAHASFKTEFLHSLW*RS**T**MG*SAKLYRHLHRIRL*GI*CLSGSLHLVI*VASNAVFRVAKHT  667
                C  +R+  RQVM  L TR  F+ HEIPTL+K+*Q*IKG *GWANFGL STC  G   +L+EV+*KE +AS +   LHS   R  *T *+G S + YR LHR+RL* +*C+SGS H  +* A+  VF  A+ +
Subject   5601  CSYHRKPLRQVMQRLVTRRSFDLHEIPTLHKV*Q*IKGG*GWANFGLFSTCCPGPLRALHEVY*KETYASIEA*LLHSFRQRPR*TE*VGES*RFYRCLHRVRL*SL*CVSGSFHSGV*TANYEVFGFARRS  5996

Range 10: 5340 to 5552 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
97.7 bits(207) 0.0 42/71(59%) 0/71(0%) Plus/Plus
Query       11  IKQCL*KI*KHLP*T*G**FHHFFNGCPEAFKVFKATSGGCEAKACKALWKVSA*HIFVKSSIEC*PQCQY  223
                ++QCL*KI*+HLP* *G *F H  +G P+AFK+F ATS   + +ACK LWK+ A* I VK + EC PQCQ+
Subject   5340  VEQCL*KI*EHLP*A*GK*FCHILDGSPKAFKIF*ATS*SGKVEACKTLWKIFA*RILVKGTFECWPQCQH  5552

Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome

Sequence ID: JX559646.1 Length: 8726 Number of Matches: 11

Range 1: 5332 to 5988 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
486.3 bits(1055) 0.0 208/219(95%) 0/219(0%) Plus/Plus
Query        3  GELLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVNMFNEAVQEFEXXXXXXXXXTIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVKARNFTGICTESDYEAFDASQDHFILSFELQVMRFLGLP  659
                GE LSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLD+FLSKVPLNA+HN NMFNEAV+EFE KKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWV+AR FTGICTESDYEAFDASQDHFIL+FELQ+M+FLGLP
Subject   5332  GEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKVPLNANHNSNMFNEAVREFEEKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVRARGFTGICTESDYEAFDASQDHFILAFELQIMKFLGLP  5988

Range 2: 5622 to 5900 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
173.4 bits(372) 0.0 74/93(80%) 0/93(0%) Minus/Minus
Query      293  VQMPVKFRALTHSLSSSRPLPE*M*KFGFKACMSFFSMYLI*GAKRTKTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE  571
                VQMPV   ALTHS +SSRPLPE M*K GF+AC+SFFSMYL+*GAKRT+TAC*KQA+VCPALATL+LLSN VQC DFMK++ATS+SQS HDLPE
Subject   5622  VQMPVNPLALTHSFNSSRPLPEWM*KLGFRACISFFSMYLM*GAKRTRTAC*KQARVCPALATLSLLSNLVQCCDFMKMRATSNSQSLHDLPE  5900

Range 3: 5370 to 5537 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.0 bits(214) 0.0 42/56(75%) 0/56(0%) Minus/Minus
Query       41  LAFNGTFDKNVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*M  208
                LAF+GT D+  SS+NFP GFARLS AAST GFENF+RFRTA++ VMES PLCLG*M
Subject   5370  LAFSGTLDRKESSKNFPYGFARLSLAASTWGFENFRRFRTAMRNVMESFPLCLG*M  5537

Range 4: 5940 to 5987 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.9 bits(61) 0.0 11/16(69%) 0/16(0%) Minus/Minus
Query      611  GNPKNRITCNSNDKMK  658
                GNPKN I CNSN ++K
Subject   5940  GNPKNFIICNSNARIK  5987

Range 5: 5470 to 5976 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
188.0 bits(404) 0.0 88/169(52%) 0/169(0%) Minus/Minus
Query      141  KPHYLQLK*QDEVILRGIKCLII*FCANACKVSRFNPFIKFIKTFTRVNVKIRF*SLHELLFNVPHIRSKTNQNCMLKAGQSLPSLSYP*SIVKFCTMLGFHEN*SDI**PIPT*PA*MILYSCSTFASLFGFKLLNCLIEHIDIVASIQWNF*QKCVKQKLSIRLCTP  647
                K HYLQL+  D+V+L GIK  ++*FCANA + S  +P ++ I  FT ++V++  *SLH+LL +V H+R K +QN +LKA + LPS SYP  IVKF TML  HEN S+I  PIPT*PA*M+LYS  T    F  +L +CLIEHI IV  I WN  Q+ ++ +L I  C P
Subject   5470  KLHYLQLEC*DKVVLGGIKGFVV*FCANASEPSSSDPLVQLI*AFT*MDVEVGL*SLHQLLLDVSHVRCKADQNSVLKASKGLPSFSYPKPIVKFGTMLRLHENESNIQQPIPT*PA*MVLYSRCTLTGFFFLELPHCLIEHIGIVIGI*WNLRQERIQ*ELPIWFCPP  5976

Range 6: 5330 to 5446 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.1 bits(114) 0.0 22/39(56%) 0/39(0%) Minus/Minus
Query        1  ALKTLNASGQPLKK*WNHYPYV*GKCFQIFHKHCLITHQ  117
                ALK L+A  QP    WNH+ Y  GKCFQIFH H  + HQ
Subject   5330  ALKILDAFEQP*GMLWNHFLYALGKCFQIFHMHYSVAHQ  5446

Range 7: 5330 to 5986 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
189.8 bits(408) 0.0 113/219(52%) 0/219(0%) Plus/Plus
Query        1  LVSY*AMLVKDLKAFTLDIRVMIPSLF*WLSGSV*SFQSHKWRLRS*GVQSLMESFCLTHFCQKFH*MLATMSICSMRQFRSLKPKRLAKVLQL*RIIQAGHVGIGY*MSL*FS*NPNIVQNLTID*G*LRLGKLWPAFNMQFWFVLLLI*GTLKRSSCKL*NRIFTFTLVKVLMNLMNGLKRETLQAFAQNQIMRHLMPLRITSSCHLSCK*CGF*GC  657
                LVS * M VKDLKAFT  I+ MIP    WL  SV*+FQS + +  +*G Q+ M S      C +FH*M  T+ ICSMRQ  S + K+  +V +L*R IQAGHVGIG  M L FS*+ +IV NLTI  G*L+LGK   AFN  FW  L L * T +RS CKL*+   T   VK  M+  +G + E   AFAQNQ  + LMP R T S H SC+*  F  C
Subject   5330  LVSN*VMHVKDLKAFTQGIKEMIP*HSSWLFESV*NFQSPRLKQPN*GGQNHMGSSYWILSCLRFH*MPITIPICSMRQCGSSRKKKPVRVQRL*RTIQAGHVGIGCWMLLSFS*SRSIVPNLTIGLG*LKLGKPLLAFNTLFWSALHLT*DTSRRS*CKL*SPTSTSIQVKA*MS*TSGSELEGSLAFAQNQTTKPLMPPRTTLS*HSSCR**SFWDC  5986

Range 8: 5601 to 5987 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
132.6 bits(283) 0.0 68/129(53%) 0/129(0%) Plus/Plus
Query      272  CCNYRESFRQVMSGLATRCRFNFHEIPTLYKI*Q*IKGS*GWANFGLLSTCSFGSFCSLYEVH*KEAHASFKTEFLHSLW*RS**T**MG*SAKLYRHLHRIRL*GI*CLSGSLHLVI*VASNAVFRVA  658
                C +YRE FRQVM GLA  C  +FHE+  LY+I*Q*  GS* WAN  LLST   G  C+L+E+H +EA AS K + LH   *R  *   +G S +++ HLHRIRL  +*CL G L+  I VA N VF +A
Subject   5601  CSDYREPFRQVM*GLAVGCCSHFHEVAALYQI*Q*A*GS*SWANPCLLSTRCSGPLCTLHEIHREEADASSKAQLLHPFR*RPR*VERVGQS*RVHWHLHRIRLRSL*CLPGPLYPSIRVADNEVFGIA  5987

Range 9: 5331 to 5552 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.9 bits(131) 0.0 32/74(43%) 0/74(0%) Plus/Plus
Query        2  W*VIKQCL*KI*KHLP*T*G**FHHFFNGCPEAFKVFKATSGGCEAKACKALWKVSA*HIFVKSSIEC*PQCQY  223
                W*  + C+*KI*KHLP  *  *FH+  +GC +A K+FKA     + +A K +W+V      V  S +C  Q QY
Subject   5331  W*ATE*CM*KI*KHLPKA*RK*FHNIPHGCSKASKIFKAPG*SSQTEAGKTIWEVLTGFFPV*GSTKCQSQFQY  5552

Range 10: 5471 to 5956 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
148.2 bits(317) 0.0 79/162(49%) 0/162(0%) Minus/Minus
Query      142  QMTR*SDPERHQMPHNLILCKCL*SFAL*PIH*VHQDLYQSECKNSVLKLA*ASFQCTSYKEQNEPKLHVESRPKFAQP*LPLIYCQILYNVGIS*KLKRHLVANPDMTCLNDSL*LQHFC*PFWLQTPELPH*TY*HCG*HSMELLTKMCQAETFHKALHA  627
                +M  *S P RHQ   +LILCKC *+  L*P    H  LY + C++  L+LA AS +C S K Q+ P+  VES+  FAQ *LP  YCQI YN   S*K ++H  ANP MTCLN SL*  H    F+ +TP LPH*TY +C  H +E  T      T H  L A
Subject   5471  RMLG*SGPGRHQRLRSLILCKCQ*TL*L*PTRSTHLGLYLNGCRSWALELASASSRCISCKVQSGPEQRVESKQGFAQL*LP*AYCQIWYNAATS*K*EQHPTANPYMTCLNGSL*SLHSYWLFFPRTPALPH*TYWNCDWHLVEP*TGKNPVRTSHMVLPA  5956

Range 11: 5332 to 5421 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
33.1 bits(66) 0.0 17/30(57%) 0/30(0%) Minus/Minus
Query        3  DSH*KSDGIITLMSRVNAFKSFTSIA**LT  92
                +SH +  GII+ M  VNAFKSFT I   LT
Subject   5332  NSHEECYGIISFMPWVNAFKSFTCITQLLT  5421

Nucleotide Sequence (1353 letters)

Query ID:ds2016-132_4
Query definition:No definition line
Query length:951
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 16 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
136
272
408
544
680
816
952
1088
1224
1353

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 11

Range 1: 3310 to 4659 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1072.8 bits(2335) 0.0 448/450(100%) 0/450(0%) Minus/Plus
Query        3  VGFLLSTDGLALKAGIRSFVESESPVDPALSSPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGSGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAI  1352
                VGFLLSTDGLALKAGIRSFVESESPVDPALS PTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIG+GPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAI
Subject   3310  VGFLLSTDGLALKAGIRSFVESESPVDPALSGPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAI  4659

Range 2: 3310 to 4254 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
715.4 bits(1555) 0.0 297/315(94%) 0/315(0%) Plus/Minus
Query      408  IHF*VPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSSKCTKHNCQFSLLDVRS*HSSKPRL*IVKFLITYHASQTSQQAPLKFFRPFKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPATNLLDMPNVFIRYVKQSRYAPAWINNLNLAIDITFGADVESLKSFCQIHHIQTPPLT*LFKDVIGAWPT*VIEHVHLTPSKC*CNGCNHATIKRGTRLKMI*L*TQNST*RPLIFPKLPAHLIFRCYNDQSHMVPNAE*GNHFIFCISIFTKLLPYGWARKSWINW*FTFHERPYSCLQSQTVGAEKKAN  1352
                IHF*VPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSS KCTKHNCQFSL DVRS*HSSKPRL*IVKFLITYHASQTSQQAPLKFFRP KTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRP TNL DMPNVFIRYVKQSRYAPAWINNLN +IDITFG DVESLKSF QIHHIQTPPLT*LFK+VIGAWPT +IEHV+LTPSKC*CNGCNHA IKRGTRLKMI*L TQNST*RPLIFPKLPAHLIF CYN+QSHMVPNAE*GNHFIFC+SIFTKLLPYGWARKSWINW*FTFHERPYSCLQSQTVGAEKKAN
Subject   3310  IHF*VPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCTKHNCQFSLFDVRS*HSSKPRL*IVKFLITYHASQTSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPVTNLFDMPNVFIRYVKQSRYAPAWINNLNFSIDITFGTDVESLKSFRQIHHIQTPPLT*LFKNVIGAWPTQIIEHVYLTPSKC*CNGCNHAAIKRGTRLKMI*LQTQNST*RPLIFPKLPAHLIFWCYNNQSHMVPNAE*GNHFIFCVSIFTKLLPYGWARKSWINW*FTFHERPYSCLQSQTVGAEKKAN  4254

Range 3: 4300 to 4659 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
250.8 bits(541) 0.0 109/120(91%) 0/120(0%) Plus/Minus
Query        3  NGVISKSGSHGALFEVTG*S*IKHRIYKPPALQVVPI*LSFKQPQYIALFSTQNSSIFLRIICALTRVTSKRDESVTANNKKT*IDVTRRE*LNFIKDHAMTSL*ACNFPEEDFKGNDIP  362
                NGVISKSGSHGA FEVTG*S*IKH IYKP ALQVVPI*LSF+QPQY+ LF TQNSSIFLRIICALTR+TSKRDESVTA+NKKT*IDVTRRE*LNFIKDHAMTSL*ACNFP+EDFKGN+IP
Subject   4300  NGVISKSGSHGAFFEVTG*S*IKHWIYKPSALQVVPI*LSFEQPQYVTLFGTQNSSIFLRIICALTRITSKRDESVTADNKKT*IDVTRRE*LNFIKDHAMTSL*ACNFPKEDFKGNNIP  4659

Range 4: 3309 to 4661 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
942.7 bits(2051) 0.0 446/451(99%) 0/451(0%) Plus/Minus
Query        1  KMA*SAKAAVMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSNLNISLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHXXXXXXXXXXEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVRPPNKHP*SFSALSKLGKYVIFDPFRESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQMXXXXXXXXXYIIFRPPP*HSSSKM*LVLGLHK*LSTSTSRLPSADAMAVIMQPLRGAQG*K*FDFKHKIPHRGHSFSPNFQLTSYSGVIMISLTWCLTQNKXXXXXXXXXXXPSCFRMVGLERAGSTGDSLSTNDLIPAFKAKPSVLRRKPT  1353
                KMA*SAKAAVMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSNLN+SLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHSSSISRSLLIEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPV+PP+KHP*SFSALSKLGKYVIFDPFRESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQMSKASKASAKYIIFRPPP*HSSSKM*LVLGLHK*LSTSTSRLPSADAMAVIMQPLRGAQG*K*FDFKHKIPHRGHSFSPNFQLTSYSGVI+ISLTWCLTQNKAIISFSA*AFSPSCFRMVG ERAGSTGDSLSTNDLIPAFKAKPSVLRRKPT
Subject   3309  KMA*SAKAAVMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSNLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHSSSISRSLLIEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSALSKLGKYVIFDPFRESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQMSKASKASAKYIIFRPPP*HSSSKM*LVLGLHK*LSTSTSRLPSADAMAVIMQPLRGAQG*K*FDFKHKIPHRGHSFSPNFQLTSYSGVIIISLTWCLTQNKAIISFSA*AFSPSCFRMVGPERAGSTGDSLSTNDLIPAFKAKPSVLRRKPT  4661

Range 5: 3309 to 4238 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
678.8 bits(1475) 0.0 290/310(94%) 0/310(0%) Minus/Plus
Query      424  SWLSSQHRRFGFEGRNKVVRGK*ITS*SSSFEPNHTEATW*KCLCRK*NDCLILR*APCETDHYNTGI*GELEVWGK*VASMWNFVFKVKSFSTLCPS*WLHDYSHCISTWKA*GGRAQLLM*AKHQSHL*RAMSRGGSEYDVFGRSF*GFRHLRQM*CQWRD*GY*SRRAHICSV*HNE*TH*ACREDW*RASKYKGG*AAKS*TISS*PAFSERVKDNIFSKF*KGGKTSGVLVGRSDWRDK**EI*RFKALACWSVNF*HQAKRIDSCAWYIWSWKEFPIQELHEEI*RKICNICLT*AGSSKFNQK  1353
                SWLSSQHRRFGFEGRNKVVRGK*ITS*SSSF PNHTEATW*KCL RK*NDCLILR*APCETD+YNT I*GELEVWGK*VASMWNFVF+VKSFS LCPS*WLHDYSHCISTWKA*G RAQL +*AKHQSH *RAMS GGSEYDVFG SF*GFRHL QM*CQWR+*GY*SRRAHICSV*HNE*TH*ACR+DW*RASKYKGG*AAKS*TISS*PAFSERVKDNIFSKF*+GGKTSGVL GR DWRDK**EI*RFKALACWSVNF*HQ KRIDSCAWYIW WKEFPIQELHEEI*RKICNICLT*AGSSKFNQK
Subject   3309  SWLSSQHRRFGFEGRNKVVRGK*ITS*SSSFGPNHTEATW*KCLRRK*NDCLILR*APCETDYYNTRI*GELEVWGK*VASMWNFVFEVKSFSALCPS*WLHDYSHCISTWKA*GRRAQLFV*AKHQSHF*RAMSGGGSEYDVFGGSF*GFRHLCQM*CQWRN*GY*SRRAHICSV*HNE*TH*ACRKDW*RASKYKGG*AAKS*TISS*PAFSERVKDNIFSKF*EGGKTSGVLAGRFDWRDK**EI*RFKALACWSVNF*HQTKRIDSCAWYIWGWKEFPIQELHEEI*RKICNICLT*AGSSKFNQK  4238

Range 6: 4305 to 4661 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
244.4 bits(527) 0.0 108/119(91%) 0/119(0%) Minus/Plus
Query        1  CRYL*SLPQESYRPKGWSLRDL**SSAIPSWLHRSMSSCYSQ*RFHLSCW*PLSKHI*FSKR*SYFGC*TERYIEVA*RKVI*VQLGEPEVCKSDV*FKITL*LQKGLHDCRFC*LRHF  357
                C YL*SLP ESYRPKGWSLRDL**SSAIPSWLHRSMSSCY Q*RFHLSCW* LSKHI*FSKR*SYFGC TE +IEVA RKVI*VQLGEP+VCKS+V*FKITL*LQK LHDCRFC*LRHF
Subject   4305  CCYL*SLP*ESYRPKGWSLRDL**SSAIPSWLHRSMSSCYPQ*RFHLSCW*SLSKHI*FSKR*SYFGCRTE*HIEVARRKVI*VQLGEPKVCKSNV*FKITL*LQKRLHDCRFC*LRHF  4661

Range 7: 3311 to 4318 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
685.6 bits(1490) 0.0 313/336(93%) 0/336(0%) Plus/Minus
Query      344  QR*RHXXXXXXXXXXXXXYTLHPFLGPF*LNLLEPA*VRQMLQIFLQIXXXXXCIGNSFQLQMYQAQLSILFA*CQKLTLQQAKALNR*ISHHLSRQSDLPTSTPEVFPPFQNLENMLSLTRSEKAGQELIV*LFAAHPPLYFEARYQSSRHA*CVHSLCQTEQICARLD**PQSRH*HHIWRRCRKPQKLLPNTSYSDPPLDIALQRCDWCLAYISN*ARPPHAFQVLMQWL*SCNH*EGHKVENDLTLNTKFHIEATHFPQTSSSPHIPVL**SVSHGA*RRIRQSFHFLHKHFHQVASVWLGSKELDQLVIHFPRTTLFLPSKPNRRC*EESQ  1351
                QR*+HPSPPSLIC PSPPYTLHPFLGPF*LNLLEPA*VRQMLQIFLQISS*SSCIGNSFQ QMYQAQLSILF *CQKLTLQQAKALNR*ISHHLSRQS+LP STPEVFPP QNLENMLSLTRSEKAGQELIV*LFAAHPPLYFEARYQS RHA*CVHSLCQTEQICARLD**PQ  H*HHIW RCRKPQKL PNTSYSDPP DIALQ+CDWCLAY +N*AR PHAFQVLMQWL*SC+H*EGHK ENDLT NTKFHIEATHFPQTSSSPHI VL**SVSHGA*RRIRQSFHFL KHFHQVASVWLG KELDQLVIHFPRTTLFLPSKPNRRC*EESQ
Subject   3311  QR*QHPSPPSLICLPSPPYTLHPFLGPF*LNLLEPA*VRQMLQIFLQISS*SSCIGNSFQPQMYQAQLSILFV*CQKLTLQQAKALNR*ISHHLSRQSNLPASTPEVFPPSQNLENMLSLTRSEKAGQELIV*LFAAHPPLYFEARYQSFRHA*CVHSLCQTEQICARLD**PQFLH*HHIWHRCRKPQKLPPNTSYSDPPPDIALQKCDWCLAYTNN*ARLPHAFQVLMQWL*SCSH*EGHKAENDLTSNTKFHIEATHFPQTSSSPHILVL**SVSHGA*RRIRQSFHFLRKHFHQVASVWLGPKELDQLVIHFPRTTLFLPSKPNRRC*EESQ  4318

Range 8: 4349 to 4660 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
231.1 bits(498) 0.0 95/104(91%) 0/104(0%) Plus/Minus
Query        2  KWRNQQKRQSWSPF*SYRVILNQTSDLQTSGSPSCTYMTFLQATSIYRSVQHPK*LYLFENHMCFDKGHQQER*KRHCE*QEDIDRCNQEGIAELHQRSRNDQP  313
                KWRNQQKRQSWS F*SYRVILNQT DLQT GSPSCTYMTFL+ATSI  SV+HPK*LYLFENHMCFDK HQQER*KRHC *QEDIDRCNQEGIAELHQRSRNDQP
Subject   4349  KWRNQQKRQSWSLF*SYRVILNQTLDLQTFGSPSCTYMTFLRATSICHSVRHPK*LYLFENHMCFDKDHQQER*KRHCG*QEDIDRCNQEGIAELHQRSRNDQP  4660

Range 9: 3311 to 4189 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
584.4 bits(1269) 0.0 274/293(94%) 0/293(0%) Minus/Plus
Query      473  LAFFSAPTVWL*RQE*GRSWKVNHQLIQLFRAQPYGSNXXXXXXXXXXXLPYSALGTM*D*SL*HRNMR*AGSLGKMSGLYVEFCV*SQIIFNLVPLLMVA*LQPLHQHLEGVRWTCSITYVGQAPITSLKSYVKGGV*I*CIWQKLLRLSTSAPNVMSMARLRLLIQAGAYLLCLT*RMNTLGMSRRLVAGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLKGRKNFRGACWEV*LA**VMRNLTIQSLGLLECQLLTSSKEN*QLCLVHLELERVSYTRAS*RDLKEN  1351
                LAFFSAPTVWL*RQE*GRSWKVNHQLIQLFRAQPYGSNLVKML QKMK*LPYSALGTM*D* L*H+NMR*AGSLGKMSGLYVEFCV*SQIIF+LVPLLM A*LQPLHQHLEGVR TCSI  VGQAPIT LKSYV+GGV*I*CIW+KLLRLSTS PNVMSM +LRLLIQAGAYLLCLT*RMNTLGMS+RLV GLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVL+GRKNFRGACWEV*LA**VMRNLTIQSLGLLECQLLTS+KEN*QLCLVHL LERVSYTRAS*RDLKEN
Subject   3311  LAFFSAPTVWL*RQE*GRSWKVNHQLIQLFRAQPYGSNLVKMLTQKMK*LPYSALGTM*D*LL*HQNMR*AGSLGKMSGLYVEFCV*SQIIFSLVPLLMAA*LQPLHQHLEGVR*TCSIICVGQAPITFLKSYVRGGV*I*CIWRKLLRLSTSVPNVMSMEKLRLLIQAGAYLLCLT*RMNTLGMSKRLVTGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLRGRKNFRGACWEV*LA**VMRNLTIQSLGLLECQLLTSNKEN*QLCLVHLGLERVSYTRAS*RDLKEN  4189

Range 10: 4466 to 4660 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
139.0 bits(297) 0.0 58/65(89%) 0/65(0%) Minus/Plus
Query        2  KAHMILKKIELFWVLNRAIY*GCLKESHIGTTWRAGGL*IRCLIQDYPVTSKRAP*LPLLLITPF  196
                KAHMILKKIELFWV NR  Y*GC KESHIGTTWRA GL*I+CLIQDYPVTSK+AP*LPLLLITPF
Subject   4466  KAHMILKKIELFWVPNRVTY*GCSKESHIGTTWRAEGL*IQCLIQDYPVTSKKAP*LPLLLITPF  4660

Range 11: 4223 to 4411 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
100.0 bits(212) 0.0 60/63(95%) 0/63(0%) Minus/Plus
Query      251  QIQSKGT*KWMKSVXXXXXXXXXXRAGMSLPLKSSSGKLQA*RLVIA*SLMKFSYSLLVTSIY  439
                QIQSKGT*KWMKSVRW*R+ANQRRRAGM LPLKSS GKLQA*RLVIA*SLMKFSYSLLVTSIY
Subject   4223  QIQSKGT*KWMKSVRW*RQANQRRRAGMLLPLKSSLGKLQA*RLVIA*SLMKFSYSLLVTSIY  4411

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 12

Range 1: 3310 to 4659 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1066.4 bits(2321) 0.0 445/450(99%) 0/450(0%) Minus/Plus
Query        3  VGFLLSTDGLALKAGIRSFVESESPVDPALSSPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGSGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAI  1352
                VGFLLSTDGLALKAGIRSFVESESPVDPALS+PTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIG+GPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTS IKQRELTVVLGTFGAGKSFL+KSFMKRSEGKFVTFVSPRRALANSIKRDLEMD+ECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAI
Subject   3310  VGFLLSTDGLALKAGIRSFVESESPVDPALSNPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSGIKQRELTVVLGTFGAGKSFLHKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAI  4659

Range 2: 3309 to 4661 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
910.6 bits(1981) 0.0 432/451(96%) 0/451(0%) Plus/Minus
Query        1  KMA*SAKAAVMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSNLNISLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHXXXXXXXXXXEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVRPPNKHP*SFSALSKLGKYVIFDPFRESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQMXXXXXXXXXYIIFRPPP*HSSSKM*LVLGLHK*LSTSTSRLPSADAMAVIMQPLRGAQG*K*FDFKHKIPHRGHSFSPNFQLTSYSGVIMISLTWCLTQNKXXXXXXXXXXXPSCFRMVGLERAGSTGDSLSTNDLIPAFKAKPSVLRRKPT  1353
                KMA*SAKAAVM+PFLKLQGNLESNIGFTNLRLSKLYLYDFPSS+LN+SLCSAPKIALSF*ESYVL*QGSPAREMKASLR+TRRHRSM*PGGNS TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHSSSISRSLLIEFARARLGETNVTNFPSDLFMKLL RKLFPAPNVPSTTVNSLCLM EVDTPASQGFESLNFSSLITPV+PP+KHP*SFSA SKLGKYVIFDPF+ESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMS RADMRPPGLITSISPLTSHLAQMSKAS ASAKYIIFRPPP*HSSSKM*LVLGLHK*LSTSTSRLPSADA+AVIMQPLRGAQG*K* DFKHKIPHRGHSFSPNFQLTSYSGVIMISLT CLTQNKAIISFSA*AFSPSCFR+VG ERAGSTGDSLSTNDLIPAFKA+PSVLRRKPT
Subject   3309  KMA*SAKAAVMDPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSSLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRMTRRHRSM*PGGNSWTSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHSSSISRSLLIEFARARLGETNVTNFPSDLFMKLLCRKLFPAPNVPSTTVNSLCLMPEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSARSKLGKYVIFDPFKESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSKRADMRPPGLITSISPLTSHLAQMSKASNASAKYIIFRPPP*HSSSKM*LVLGLHK*LSTSTSRLPSADAIAVIMQPLRGAQG*K*LDFKHKIPHRGHSFSPNFQLTSYSGVIMISLT*CLTQNKAIISFSA*AFSPSCFRIVGFERAGSTGDSLSTNDLIPAFKARPSVLRRKPT  4661

Range 3: 3310 to 4254 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
643.5 bits(1398) 0.0 273/315(87%) 0/315(0%) Plus/Minus
Query      408  IHF*VPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSSKCTKHNCQFSLLDVRS*HSSKPRL*IVKFLITYHASQTSQQAPLKFFRPFKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPATNLLDMPNVFIRYVKQSRYAPAWINNLNLAIDITFGADVESLKSFCQIHHIQTPPLT*LFKDVIGAWPT*VIEHVHLTPSKC*CNGCNHATIKRGTRLKMI*L*TQNST*RPLIFPKLPAHLIFRCYNDQSHMVPNAE*GNHFIFCISIFTKLLPYGWARKSWINW*FTFHERPYSCLQSQTVGAEKKAN  1352
                IHF VPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSS KC KH+CQFSL D RS HSSKPRL*IVKFLITYHAS TSQQAPLKFFRP KTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRP TNL DMPNVFIRYVK+SRYAPAWI+N N  IDITF  DVESLK FCQIHHIQTPPLT*LFKDVIGA PT*VIEHV+LTPSKC*CN CNHA IKRGTRLKMI L*TQNST*RP I PKLPAH IF  YNDQSHM+PN E*GNHFIFCISIFTKLLPY W  KSWIN *FTFH+RPYS LQS T+ A+KK N
Subject   3310  IHFQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCAKHDCQFSLFDARSRHSSKPRL*IVKFLITYHAS*TSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPVTNLFDMPNVFIRYVKKSRYAPAWIDNFNFTIDITFSTDVESLKRFCQIHHIQTPPLT*LFKDVIGAGPT*VIEHVYLTPSKC*CNSCNHAAIKRGTRLKMIGL*TQNST*RPFILPKLPAHFIFWRYNDQSHMMPNTE*GNHFIFCISIFTKLLPYSWV*KSWINR*FTFHKRPYSRLQS*TICAKKKTN  4254

Range 4: 4300 to 4659 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
244.8 bits(528) 0.0 106/120(88%) 0/120(0%) Plus/Minus
Query        3  NGVISKSGSHGALFEVTG*S*IKHRIYKPPALQVVPI*LSFKQPQYIALFSTQNSSIFLRIICALTRVTSKRDESVTANNKKT*IDVTRRE*LNFIKDHAMTSL*ACNFPEEDFKGNDIP  362
                NGVISK GSHG LFEVTG*S*IKH IY+PPALQVVPI*L F+QPQY+ LFSTQNSSIFLRIICALTR+TSKRDESVTAN+KKT*IDVTR E*L+FIKDHAMTSL*ACNFP++DFKGNDIP
Subject   4300  NGVISKGGSHGPLFEVTG*S*IKHWIYEPPALQVVPI*LPFEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANDKKT*IDVTRGE*LDFIKDHAMTSL*ACNFPKKDFKGNDIP  4659

Range 5: 3309 to 4238 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
614.1 bits(1334) 0.0 268/310(86%) 0/310(0%) Minus/Plus
Query      424  SWLSSQHRRFGFEGRNKVVRGK*ITS*SSSFEPNHTEATW*KCLCRK*NDCLILR*APCETDHYNTGI*GELEVWGK*VASMWNFVFKVKSFSTLCPS*WLHDYSHCISTWKA*GGRAQLLM*AKHQSHL*RAMSRGGSEYDVFGRSF*GFRHLRQM*CQWRD*GY*SRRAHICSV*HNE*TH*ACREDW*RASKYKGG*AAKS*TISS*PAFSERVKDNIFSKF*KGGKTSGVLVGRSDWRDK**EI*RFKALACWSVNF*HQAKRIDSCAWYIWSWKEFPIQELHEEI*RKICNICLT*AGSSKFNQK  1353
                SW SS HR   FEG NKVV GK*IT *SSSF+PN+TEATW*KCLCRK*NDCLIL *A CETDHYN  I* ELEVWG+*+ASMWNFVFKV+SFSTLCPS*WLHDYS+CISTWKA*G RAQLLM*A+HQSHL*RAMSRGGSEYDVFGRS *GFRHL  M*CQW +* Y SRRAHICS *HNE*TH*ACR+DW*RASKYKGG*AAKS*TISS*PAF ERVKDNIFSKF* GGKTSGVL GR +WRDK**EI*RFKALACWSV F HQ KRIDS AW+IW WKEFP QELHEEI*RKICNICLT*AGSSKFNQK
Subject   3309  SWFSS*HRWSSFEGGNKVVCGK*ITG*SSSFKPNYTEATW*KCLCRK*NDCLILC*ASCETDHYNARI*SELEVWGE*MASMWNFVFKVQSFSTLCPS*WLHDYSYCISTWKA*GRRAQLLM*AQHQSHL*RAMSRGGSEYDVFGRSV*GFRHLC*M*CQW*N*SYQSRRAHICSF*HNE*TH*ACRKDW*RASKYKGG*AAKS*TISS*PAFFERVKDNIFSKF*AGGKTSGVLAGRFNWRDK**EI*RFKALACWSVYFWHQTKRIDSRAWHIWGWKEFPTQELHEEI*RKICNICLT*AGSSKFNQK  4238

Range 6: 4305 to 4661 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
234.3 bits(505) 0.0 104/119(87%) 0/119(0%) Minus/Plus
Query        1  CRYL*SLPQESYRPKGWSLRDL**SSAIPSWLHRSMSSCYSQ*RFHLSCW*PLSKHI*FSKR*SYFGC*TERYIEVA*RKVI*VQLGEPEVCKSDV*FKITL*LQKGLHDCRFC*LRHF  357
                CRYL*SL  ESYRPKGWSLRDL**S AIP WLHRSMSSC+SQ*RFHLSCW* LSKHI*FSKR*SYFGC*TE +IE A R+VI*VQLGEPEV KS+V*FKITL*LQKG+HDCR C*LRHF
Subject   4305  CRYL*SLS*ESYRPKGWSLRDL**SPAIPPWLHRSMSSCHSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEAARREVI*VQLGEPEVRKSNV*FKITL*LQKGVHDCRLC*LRHF  4661

Range 7: 4223 to 4264 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.5 bits(58) 0.0 12/14(86%) 0/14(0%) Minus/Plus
Query      398  QIQSKGT*KWMKSV  439
                QIQSKGT KWM SV
Subject   4223  QIQSKGTWKWMMSV  4264

Range 8: 3311 to 4318 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
610.0 bits(1325) 0.0 291/336(87%) 0/336(0%) Plus/Minus
Query      344  QR*RHXXXXXXXXXXXXXYTLHPFLGPF*LNLLEPA*VRQMLQIFLQIXXXXXCIGNSFQLQMYQAQLSILFA*CQKLTLQQAKALNR*ISHHLSRQSDLPTSTPEVFPPFQNLENMLSLTRSEKAGQELIV*LFAAHPPLYFEARYQSSRHA*CVHSLCQTEQICARLD**PQSRH*HHIWRRCRKPQKLLPNTSYSDPPLDIALQRCDWCLAYISN*ARPPHAFQVLMQWL*SCNH*EGHKVENDLTLNTKFHIEATHFPQTSSSPHIPVL**SVSHGA*RRIRQSFHFLHKHFHQVASVWLGSKELDQLVIHFPRTTLFLPSKPNRRC*EESQ  1351
                QR*RHPSPPSLIC PS PYT HPF GPF*LNLLEPA*VRQMLQIFLQISS*SSC+GNSFQ QM QA+LSILF *CQK TLQQAKALNR*ISHHLSRQ +LP STPEVFPP QNLENMLSLTRS+KAGQELIV*LFAAHPPLYFEARYQS RHA*CVHSLCQ EQICARLD** Q  H*HHI  RCRKPQ LLPNTSYSDPPLDIALQRCDWC AYISN*AR PHAFQVLMQ L*SC+H*EGHKVEND TLNTKFHIEA H PQTSSS HI  L**SVSH A* RIRQSFHFLHKHFHQVASV LG KELDQ VIHFP+TTLF PSK +  C*EE+Q
Subject   3311  QR*RHPSPPSLICLPSLPYTHHPFPGPF*LNLLEPA*VRQMLQIFLQISS*SSCVGNSFQPQMCQARLSILFV*CQK*TLQQAKALNR*ISHHLSRQLNLPASTPEVFPPAQNLENMLSLTRSKKAGQELIV*LFAAHPPLYFEARYQSFRHA*CVHSLCQKEQICARLD**LQFHH*HHI*HRCRKPQTLLPNTSYSDPPLDIALQRCDWCWAYISN*ARLPHAFQVLMQ*L*SCSH*EGHKVENDWTLNTKFHIEAIHSPQTSSSLHILAL**SVSHDA*HRIRQSFHFLHKHFHQVASV*LGLKELDQPVIHFPQTTLFPPSKLDHLC*EENQ  4318

Range 9: 4349 to 4660 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
226.5 bits(488) 0.0 92/104(88%) 0/104(0%) Plus/Minus
Query        2  KWRNQQKRQSWSPF*SYRVILNQTSDLQTSGSPSCTYMTFLQATSIYRSVQHPK*LYLFENHMCFDKGHQQER*KRHCE*QEDIDRCNQEGIAELHQRSRNDQP  313
                KWRNQQ+RQSW+PF*SYRVILNQT DL+TSGSPSCTYMT L+A SI  SVQHPK*LYLFENHMCFDK HQQER*KRHCE*QEDIDRCNQ GIA LHQRSRNDQP
Subject   4349  KWRNQQRRQSWTPF*SYRVILNQTLDLRTSGSPSCTYMTSLRAASICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQGGIAGLHQRSRNDQP  4660

Range 10: 3311 to 4189 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
520.2 bits(1129) 0.0 253/293(86%) 0/293(0%) Minus/Plus
Query      473  LAFFSAPTVWL*RQE*GRSWKVNHQLIQLFRAQPYGSNXXXXXXXXXXXLPYSALGTM*D*SL*HRNMR*AGSLGKMSGLYVEFCV*SQIIFNLVPLLMVA*LQPLHQHLEGVRWTCSITYVGQAPITSLKSYVKGGV*I*CIWQKLLRLSTSAPNVMSMARLRLLIQAGAYLLCLT*RMNTLGMSRRLVAGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLKGRKNFRGACWEV*LA**VMRNLTIQSLGLLECQLLTSSKEN*QLCLVHLELERVSYTRAS*RDLKEN  1351
                L FF A  V L*R+E*GR WKVNH+LIQLF+ Q YGSNLVKMLMQKMK*LPYS LG M*D*SL* +NM+*AGSLG+M+GLYVEFCV*S IIFNLVPLLM A*LQ LHQHLEGVR TCSITYVG APITSLKSYVKGGV*I*CIWQK LRLSTS  NVMSM +L+L IQAGAYLL LT*RMNTLGMS+RLV GLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVL GRKNFRGACWEV*LA**VMRNLTIQSLGLLEC LL S+KEN*Q CL HL LERVSYTRAS*RDLKEN
Subject   3311  LVFFLAQMV*L*RRE*GRLWKVNHRLIQLFQTQLYGSNLVKMLMQKMK*LPYSVLGIM*D*SL*RQNMK*AGSLGRMNGLYVEFCV*SPIIFNLVPLLMAA*LQLLHQHLEGVR*TCSITYVGPAPITSLKSYVKGGV*I*CIWQKRLRLSTSVLNVMSMVKLKLSIQAGAYLLFLT*RMNTLGMSKRLVTGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLSGRKNFRGACWEV*LA**VMRNLTIQSLGLLECLLLASNKEN*QSCLAHLGLERVSYTRAS*RDLKEN  4189

Range 11: 4466 to 4660 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
136.2 bits(291) 0.0 57/65(88%) 0/65(0%) Minus/Plus
Query        2  KAHMILKKIELFWVLNRAIY*GCLKESHIGTTWRAGGL*IRCLIQDYPVTSKRAP*LPLLLITPF  196
                KAHMILKKIELFWVLNR  Y*GC K SHIGTTWRAGG *I+CLIQDYPVTSKR P*LP LLITPF
Subject   4466  KAHMILKKIELFWVLNRVTY*GCSKGSHIGTTWRAGGS*IQCLIQDYPVTSKRGP*LPPLLITPF  4660

Range 12: 4298 to 4411 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.0 bits(142) 0.0 34/38(89%) 0/38(0%) Minus/Plus
Query      251  AGMSLPLKSSSGKLQA*RLVIA*SLMKFSYSLLVTSIY  364
                AGMSLPLKS  GKLQA*RLVIA*SLMK SYS LVTSIY
Subject   4298  AGMSLPLKSFLGKLQA*RLVIA*SLMKSSYSPLVTSIY  4411

Grapevine rupestris stem pitting associated virus isolate Tannat Rspav1, complete genome

Sequence ID: KR528585.1 Length: 8595 Number of Matches: 12

Range 1: 3292 to 4641 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1036.6 bits(2256) 0.0 432/450(96%) 0/450(0%) Minus/Plus
Query        3  VGFLLSTDGLALKAGIRSFVESESPVDPALSSPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGSGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAI  1352
                VGFLLSTDGLALKAGIRSFVESE  V+P LS+P I KQL ENAYAENEMIALFC+RHHVRLI+ITPEYEVSWKFGE EWPLCGILCLKS+HFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCD+NGEIEVINP G+ISALFDITNEHIRHVEKIG+GPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDS+PWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDE CKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAI
Subject   3292  VGFLLSTDGLALKAGIRSFVESERLVNPDLSAPAISKQLEENAYAENEMIALFCIRHHVRLIVITPEYEVSWKFGEGEWPLCGILCLKSSHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPRGKISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSRPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEGCKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAI  4641

Range 2: 3291 to 4643 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
824.9 bits(1794) 0.0 396/451(88%) 0/451(0%) Plus/Minus
Query        1  KMA*SAKAAVMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSNLNISLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHXXXXXXXXXXEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVRPPNKHP*SFSALSKLGKYVIFDPFRESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQMXXXXXXXXXYIIFRPPP*HSSSKM*LVLGLHK*LSTSTSRLPSADAMAVIMQPLRGAQG*K*FDFKHKIPHRGHSFSPNFQLTSYSGVIMISLTWCLTQNKXXXXXXXXXXXPSCFRMVGLERAGSTGDSLSTNDLIPAFKAKPSVLRRKPT  1353
                KMA*SAKAAVMEPFLKLQG+LESNIGFTNLRLSKLYLYDFPSS+LN+SLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLH SSISRSLLIEFA+ARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQG ESLNFSSLITPVRPP+KHP*SFSA SKLGKYVIFDPF+ESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCS VMSN A++ P GLITSISP  SHLAQMSKASKASAKYI+ RPPP* SSSK+*LVLGLH+* +TSTSRLPSA+AMAVIMQP  GA G K* D + +IPHRGHS SPNFQLTSYSGVI ISLTWC  QN AIISFSA*AFS +C  M G ER+G T  SLST D IPAF+A PSVL +KPT
Subject   3291  KMA*SAKAAVMEPFLKLQGSLESNIGFTNLRLSKLYLYDFPSSSLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHPSSISRSLLIEFAKARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGLESLNFSSLITPVRPPSKHP*SFSARSKLGKYVIFDPFKESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSLVMSNNAEILPRGLITSISPFISHLAQMSKASKASAKYIMLRPPP*QSSSKI*LVLGLHR*FNTSTSRLPSAEAMAVIMQPFNGAHGWK*LDLRQRIPHRGHSPSPNFQLTSYSGVITISLTWCRIQNNAIISFSA*AFSSNCLEMAGAERSGFTKRSLSTKDRIPAFRASPSVLSKKPT  4643

Range 3: 3292 to 4236 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
456.1 bits(989) 0.0 205/315(65%) 0/315(0%) Plus/Minus
Query      408  IHF*VPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSSKCTKHNCQFSLLDVRS*HSSKPRL*IVKFLITYHASQTSQQAPLKFFRPFKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPATNLLDMPNVFIRYVKQSRYAPAWINNLNLAIDITFGADVESLKSFCQIHHIQTPPLT*LFKDVIGAWPT*VIEHVHLTPSKC*CNGCNHATIKRGTRLKMI*L*TQNST*RPLIFPKLPAHLIFRCYNDQSHMVPNAE*GNHFIFCISIFTKLLPYGWARKSWINW*FTFHERPYSCLQSQTVGAEKKAN  1352
                IH  VPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSS KCTK+NCQFSL +V S*HSSKPR *I+KFL+ YH S TSQQAPLKFFRP KTWKICYL*PVQRKQVKS*SFNFSQLIH YTLRP TNL DMP V I YVKQ R     IN+ NL+I ITF A+V+ LKSF  IHH++TP LT L K++I A  T +I H++ TPSKC* NGC+HATI+ GT L++ *   +NS   P  FPK P   IF C   Q HMVPN +* NH I  ISI  +L   GW  K WI    T H+R  + LQ +++ AE K N
Subject   3292  IHLQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCTKYNCQFSLFNVGS*HSSKPRP*IIKFLVAYHTS*TSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHFYTLRPITNLFDMPYVLISYVKQCRNFTTRINHFNLSIYITFSANVKGLKSFS*IHHVKTPSLTKLLKNMISAGSTQII*HINFTPSKC*SNGCDHATIQWGTWLEVT*FKAKNSAQGPFTFPKFPTDFIFWCDYYQPHMVPNTK*CNHLILGISILFQLFRNGWG*KIWIYQALTLHKRSNTGLQGKSISAE*KTN  4236

Range 4: 4282 to 4641 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
248.5 bits(536) 0.0 107/120(89%) 0/120(0%) Plus/Minus
Query        3  NGVISKSGSHGALFEVTG*S*IKHRIYKPPALQVVPI*LSFKQPQYIALFSTQNSSIFLRIICALTRVTSKRDESVTANNKKT*IDVTRRE*LNFIKDHAMTSL*ACNFPEEDFKGNDIP  362
                NGVISKSGSHGA FEVTG*S*IKHRIY+PPALQVVPI*L F+QPQY+ LFSTQNSSIFLRIICALTR+TSKRDESVTANNKKT*IDVTR E*LNFIKDHAMTSL*ACNFP+++FKG++IP
Subject   4282  NGVISKSGSHGAFFEVTG*S*IKHRIYEPPALQVVPI*LPFEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*IDVTRGE*LNFIKDHAMTSL*ACNFPKKNFKGDNIP  4641

Range 5: 3327 to 4220 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
420.8 bits(912) 0.0 195/298(65%) 0/298(0%) Minus/Plus
Query      424  EGRNKVVRGK*ITS*SSSFEPNHTEATW*KCLCRK*NDCLILR*APCETDHYNTGI*GELEVWGK*VASMWNFVFKVKSFSTLCPS*WLHDYSHCISTWKA*GGRAQLLM*AKHQSHL*RAMSRGGSEYDVFGRSF*GFRHLRQM*CQWRD*GY*SRRAHICSV*HNE*TH*ACREDW*RASKYKGG*AAKS*TISS*PAFSERVKDNIFSKF*KGGKTSGVLVGRSDWRDK**EI*RFKALACWSVNF*HQAKRIDSCAWYIWSWKEFPIQELHEEI*RKICNICLT*AGSSKFNQK  1317
                EGR  +  G+*    S SF P+H      +CLCR+*+DC+IL  APCE D  +T I* +LE+WG+*+A + N +  +KS  T+CP  WLHD+SHC STWKA*    +L +* +H S+ * A+S  GS +DVF  SF*G  HLR M* +WRD*  *S   + C V*HN * H ACR+DW* ASKYK G*AAKS*TISS*PAF ERVKDNIFSKF* GGKTSGVL GRS+W DK  EI* FKALACWSVNF H  KRIDSC WYIW WKEFPIQELHEEI*RKICNICLT*AG SKFNQK
Subject   3327  EGRYSIFCGE*ALGKSRSFSPSHF*TIGRECLCRE*DDCIILYSAPCEADSNHTRI*SQLEIWGR*MAPVRNSLP*IKSLPTMCPIEWLHDHSHCFSTWKA*S*CVKLSV*TQH*SYF*GALSGRGS*HDVFS*SF*GL*HLR*M*YKWRD*SD*SAW*NFCIV*HN**AHKACRKDW*WASKYKSG*AAKS*TISS*PAFFERVKDNIFSKF*AGGKTSGVLAGRSNWCDKRREI**FKALACWSVNFRH*TKRIDSCTWYIWGWKEFPIQELHEEI*RKICNICLT*AGFSKFNQK  4220

Range 6: 4287 to 4643 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
231.5 bits(499) 0.0 104/119(87%) 0/119(0%) Minus/Plus
Query        1  CRYL*SLPQESYRPKGWSLRDL**SSAIPSWLHRSMSSCYSQ*RFHLSCW*PLSKHI*FSKR*SYFGC*TERYIEVA*RKVI*VQLGEPEVCKSDV*FKITL*LQKGLHDCRFC*LRHF  357
                C +L*S   ESYRPKGWSLRDL**SSAIP WLHRSMSSCYSQ*RFHLSCW* LSKHI*FSKR*SYFGC*TE +IE A R+VI*VQLGEPEV KSDV*FK TL*LQK LHDCRFC*LRHF
Subject   4287  CCHL*SFS*ESYRPKGWSLRDL**SSAIPPWLHRSMSSCYSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEAARREVI*VQLGEPEVRKSDV*FKTTL*LQKRLHDCRFC*LRHF  4643

Range 7: 3293 to 4300 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
404.3 bits(876) 0.0 217/336(65%) 0/336(0%) Plus/Minus
Query      344  QR*RHXXXXXXXXXXXXXYTLHPFLGPF*LNLLEPA*VRQMLQIFLQIXXXXXCIGNSFQLQMYQAQLSILFA*CQKLTLQQAKALNR*ISHHLSRQSDLPTSTPEVFPPFQNLENMLSLTRSEKAGQELIV*LFAAHPPLYFEARYQSSRHA*CVHSLCQTEQICARLD**PQSRH*HHIWRRCRKPQKLLPNTSYSDPPLDIALQRCDWCLAYISN*ARPPHAFQVLMQWL*SCNH*EGHKVENDLTLNTKFHIEATHFPQTSSSPHIPVL**SVSHGA*RRIRQSFHFLHKHFHQVASVWLGSKELDQLVIHFPRTTLFLPSKPNRRC*EESQ  1351
                QR*+HPSPPSLIC PSPPYT HP  GPF*LNLL+PA*VRQMLQIFLQISS*SSCIGNSFQ QMYQ QLSILF *C+KLTLQQAKALN *IS  LS Q DLP STPEVFPP QNLENMLSLTRS+KAGQELIV*LFAAHP LYFEA YQS RHA C H LCQT Q     D*  QS H +HI R+C++PQKL  NTS  DP  D A Q+ D C  Y  N     HAFQVL QWL*SCNH  GH V +DL    +F   A H PQ S+  HI V   S SHGA  +I QS H  HKH   +   WLG K+LD    H P+   + PS    +C* ++Q
Subject   3293  QR*QHPSPPSLICLPSPPYTPHPSPGPF*LNLLKPA*VRQMLQIFLQISS*SSCIGNSFQPQMYQVQLSILFV*CRKLTLQQAKALNH*ISRRLSHQLDLPASTPEVFPPAQNLENMLSLTRSKKAGQELIV*LFAAHPLLYFEAHYQSFRHALCAH*LCQTMQKFYHAD*SLQSLHLYHI*RKCQRPQKLQLNTSC*DPLPDKAPQKYD*CWVYTDNLTHQLHAFQVLKQWL*SCNHSMGHMVGSDLI*GKEFRTGAIHLPQISN*LHILV*LLSASHGAEYKIMQSSHSRHKHSLPIV*KWLGLKDLDLPSAHSPQKIEYRPSGQVHQC*VKNQ  4300

Range 8: 4331 to 4642 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
230.2 bits(496) 0.0 94/104(90%) 0/104(0%) Plus/Minus
Query        2  KWRNQQKRQSWSPF*SYRVILNQTSDLQTSGSPSCTYMTFLQATSIYRSVQHPK*LYLFENHMCFDKGHQQER*KRHCE*QEDIDRCNQEGIAELHQRSRNDQP  313
                KWRNQQKRQSWS F*SYRV+LNQTSDL+TSGSPSCTYMT L+A SI  SVQHPK*LYLFENHMCFDK HQQER*KRHCE*QEDIDRCNQ GIAELHQRSRNDQP
Subject   4331  KWRNQQKRQSWSLF*SYRVVLNQTSDLRTSGSPSCTYMTSLRAASICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQGGIAELHQRSRNDQP  4642

Range 9: 3446 to 4171 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
321.8 bits(696) 0.0 162/242(67%) 0/242(0%) Minus/Plus
Query      473  YSALGTM*D*SL*HRNMR*AGSLGKMSGLYVEFCV*SQIIFNLVPLLMVA*LQPLHQHLEGVRWTCSITYVGQAPITSLKSYVKGGV*I*CIWQKLLRLSTSAPNVMSMARLRLLIQAGAYLLCLT*RMNTLGMSRRLVAGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLKGRKNFRGACWEV*LA**VMRNLTIQSLGLLECQLLTSSKEN*QLCLVHLELERVSYTRAS*RDLKEN  1198
                Y   GTM* *   H+NM+  G+LGK++G   EF   +Q+  N VP  MVA* QPL QHLEGV+  C I  V  A I  L+S+V+ GV  *CI  KLLR  T A NV+ M RL+ LI+   +L CLT* M+T GMS+RLV GLKV*+WMSCEKLNDQLLTCFL*TGQR*HIFQVL GRKNFRGACWEV*L **  RNL IQ LGLLECQL T +KEN*QL LVHL LERVSYTRAS*RDLKEN
Subject   3446  YFVFGTM*G***SHQNMKSVGNLGKVNGPCAEFFALNQVTSNHVPH*MVA*SQPLLQHLEGVKLMC*IICVDPALIIFLRSFVREGVLT*CI*LKLLRPLTFALNVI*MERLK*LIRVVKFLHCLT*LMST*GMSKRLVMGLKV*KWMSCEKLNDQLLTCFL*TGQR*HIFQVLSGRKNFRGACWEV*LV**ATRNLMIQGLGLLECQLPTLNKEN*QLYLVHLGLERVSYTRAS*RDLKEN  4171

Range 10: 4448 to 4642 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
141.7 bits(303) 0.0 59/65(91%) 0/65(0%) Minus/Plus
Query        2  KAHMILKKIELFWVLNRAIY*GCLKESHIGTTWRAGGL*IRCLIQDYPVTSKRAP*LPLLLITPF  196
                KAHMILKKIELFWVLNR  Y*GC K SHIGTTWRAGG *IRCLIQDYPVTSK+AP*LPLLLITPF
Subject   4448  KAHMILKKIELFWVLNRVTY*GCSKGSHIGTTWRAGGS*IRCLIQDYPVTSKKAP*LPLLLITPF  4642

Range 11: 4205 to 4393 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
81.7 bits(172) 0.0 52/63(83%) 0/63(0%) Minus/Plus
Query      251  QIQSKGT*KWMKSVXXXXXXXXXXRAGMSLPLKSSSGKLQA*RLVIA*SLMKFSYSLLVTSIY  439
                QIQSKGT +WM+ VRW*R+ANQRRRAGM  PLK   GKLQA*RLVIA*SLMKFSYS LVTSIY
Subject   4205  QIQSKGTWRWMRGVRW*RQANQRRRAGMLSPLKFFLGKLQA*RLVIA*SLMKFSYSPLVTSIY  4393

Range 12: 3350 to 3406 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.5 bits(45) 0.0 8/19(42%) 0/19(0%) Minus/Plus
Query     1238  WKVNHQLIQLFRAQPYGSN  1294
                W+V+   IQ+F+ QP+ +N
Subject   3350  WRVSAW*IQIFQPQPFLNN  3406

Grapevine rupestris stem pitting associated virus isolate VF1, partial genome

Sequence ID: KT948710.1 Length: 8716 Number of Matches: 15

Range 1: 3311 to 4660 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1017.4 bits(2214) 0.0 417/450(93%) 0/450(0%) Minus/Plus
Query        3  VGFLLSTDGLALKAGIRSFVESESPVDPALSSPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGSGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAI  1352
                VGFLLSTDGLALKAGIRSFVESES  DPALS+ T+ +QLG+NAYAENEMIALFC+RHHVRLIIITPEYEVSWKFG++EWPLCGILCL+SNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCD+NGEIEVINP GR+SALFDITNEHIRHVEKIG+GPQSIKVDELRKVKRSALDLLS+NGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWL+G+STS+IK RELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMD+ CKV KAGKSK+EGWDVVTFEVFLRK+  LKAGHCVIFDEVQLFPPGY+DLCLL IRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYN+ESRRFVNPMF+SRLPC+FKKGSMTAAFADYAI
Subject   3311  VGFLLSTDGLALKAGIRSFVESESLADPALSTQTVLQQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAI  4660

Range 2: 3310 to 4662 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
730.1 bits(1587) 0.0 361/451(80%) 0/451(0%) Plus/Minus
Query        1  KMA*SAKAAVMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSNLNISLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHXXXXXXXXXXEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVRPPNKHP*SFSALSKLGKYVIFDPFRESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQMXXXXXXXXXYIIFRPPP*HSSSKM*LVLGLHK*LSTSTSRLPSADAMAVIMQPLRGAQG*K*FDFKHKIPHRGHSFSPNFQLTSYSGVIMISLTWCLTQNKXXXXXXXXXXXPSCFRMVGLERAGSTGDSLSTNDLIPAFKAKPSVLRRKPT  1353
                KMA*SAKAAVMEPFLK  G+L+SNIGFTNLRLS LYL D PSSNLNISLCSAP IA SF ESYVL QGSPA EMKASLR+  R RS *PGGNS*TSSKITQ PAFR   FLR TSKVTTSQPS FDLPAF TL  SSISRSLLIE ARA LGET VTN PSDLF+KLLYRKL PAP VPSTTVNS  L+ EVD P S G ESLNFSSLITPV+PP+KHP SFSALSKLGK VIFDPF E RSRADR TF SSSTF+L GPLPIFSTCL+CS VMSNRADMRP GLITSISPL SHLAQMS ASKASA+YI+FRPPP H+SSKM* V GLH+*L TSTSRLPSA+A+AVIMQP  GA G*K*FD KHKIPH+GHS SPNFQLTSYSGVIMI+LT CL QNKAIISFSA*A SPSC + V ++RAGS  DSLSTN+ +PAFKA PSVL +KPT
Subject   3310  KMA*SAKAAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVLWQGSPASEMKASLRMVNRQRST*PGGNS*TSSKITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRSLLIELARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTFLSSSTFMLCGPLPIFSTCLICSLVMSNRADMRPLGLITSISPLMSHLAQMSNASKASARYIMFRPPPWHNSSKM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAHG*K*FDCKHKIPHKGHSLSPNFQLTSYSGVIMINLT*CLMQNKAIISFSA*ALSPSCCKTVWVDRAGSARDSLSTNERMPAFKASPSVLNKKPT  4662

Range 3: 3311 to 4255 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
356.6 bits(772) 0.0 163/315(52%) 0/315(0%) Plus/Minus
Query      408  IHF*VPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSSKCTKHNCQFSLLDVRS*HSSKPRL*IVKFLITYHASQTSQQAPLKFFRPFKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPATNLLDMPNVFIRYVKQSRYAPAWINNLNLAIDITFGADVESLKSFCQIHHIQTPPLT*LFKDVIGAWPT*VIEHVHLTPSKC*CNGCNHATIKRGTRLKMI*L*TQNST*RPLIFPKLPAHLIFRCYNDQSHMVPNAE*GNHFIFCISIFTKLLPYGWARKSWINW*FTFHERPYSCLQSQTVGAEKKAN  1352
                IHF + F+*I *SPP *+K Y+F+FR LH+AL+ +TL+SSK  KH+CQF   D+ S*+  KP L I+KF +TYHAS  S Q  L+ F PFK WK+ YL  + R++VKS S +FSQ IHLY LR  TNLL+MP +FI YVKQS +A A I+NLNL I++T   +VE  +S  +IHH+Q   L   FK+VI      ++++++ T +K * N C+HA I+ GT LK+I*L  QNST*RPL   KLP H IF   NDQ HM+PNAE*G H + CISI TKLL      +SWI   FTF++R Y+  QS+ + A+++ +
Subject   3311  IHFQISFN*IS*SPPG*NKGYEFTFRPLHKALIQKTLASSKSPKHDCQFPRFDI*S*YP*KPWLGIIKFFVTYHAS*AS*QTSLQLFCPFKAWKVSYLRSIHREEVKSRSLHFSQFIHLYALRAVTNLLNMPYMFISYVKQS*HASARIDNLNLPINVTLSTNVERFESLSEIHHVQAATLAQFFKNVICRGSAQIVKNIYFTSTKR*GNSCDHAAIQWGTWLKVI*LQAQNST*RPLAISKLPTHFIFWSDNDQPHMMPNAE*GYHLVLCISIVTKLLQNSLG*QSWICKGFTFNKRTYAGFQSKPICAQQETH  4255

Range 4: 4301 to 4660 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
129.4 bits(276) 0.0 60/120(50%) 0/120(0%) Plus/Minus
Query        3  NGVISKSGSHGALFEVTG*S*IKHRIYKPPALQVVPI*LSFKQPQYIALFSTQNSSIFLRIICALTRVTSKRDESVTANNKKT*IDVTRRE*LNFIKDHAMTSL*ACNFPEEDFKGNDIP  362
                NG+IS+S SHGAL E+T  S +KH I+KPPAL VVP+ L+ K  QYI L      ++ L +ICAL  VTS+ +ESVT+   +T +++  R+ LN IKDH M  L*  N  E+ FKG+D+P
Subject   4301  NGIISESCSHGALLEMTWQSGLKHWIHKPPALNVVPVGLALK*SQYITLLGP*YCAVLLGVICALAGVTSE*NESVTSYG*QTKVNIAWRKQLNLIKDHTMACL*ILNLSEKHFKGHDVP  4660

Range 5: 3325 to 4239 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
320.9 bits(694) 0.0 158/305(52%) 0/305(0%) Minus/Plus
Query      424  QHRRFGFEGRNKVVRGK*ITS*SSSFEPNHTEATW*KCLCRK*NDCLILR*APCETDHYNTGI*GELEVWGK*VASMWNFVFKVKSFSTLCPS*WLHDYSHCISTWKA*GGRAQLLM*AKHQSHL*RAMSRGGSEYDVFGRSF*GFRHLRQM*CQWRD*GY*SRRAHICSV*HNE*TH*ACREDW*RASKYKGG*AAKS*TISS*PAFSERVKDNIFSKF*KGGKTSGVLVGRSDWRDK**EI*RFKALACWSVNF*HQAKRIDSCAWYIWSWKEFPIQELHEEI*RKICNICLT*AGSSKFNQK  1338
                +HR   FE R+  V  K*I   SSS  PN   ATW*+CLCR+ +D LIL *A CE DHY++ I* ELEVW   VA MWNFV  +KS ST+CP  WLHD+S+C+S W  *   + L +   ++SH *R + R   E+DV    F   RHL  +*  W D*GY S R H+ SV*HN *T+ AC EDW*R +++KGG*  KS  I S*P   E ++DN+ SK *KG K +G+   R +WRDK* +I* F+A+A   +NF +Q   IDS AW  WSW+EF + EL+EE+*R I N+C T  GSS FN K
Subject   3325  EHRWACFESRHTFVC*K*IPCRSSSVNPNCFAATW*QCLCRERDDSLILH*ASCEVDHYHSRI*SELEVWR*RVAFMWNFVLAIKSLSTMCPIEWLHDHSYCLSAW*T*SRCS*LSVQTLYKSHF*RIVPRWRPEHDVSR*GFRSVRHLC*V*H*WGD*GYQS*RTHVSSV*HN**TYKAC*EDW*RPAEHKGG*TEKSEAICS*PPLDEWIEDNLLSKL*KGRKAAGMFARRLNWRDK*RKI**FQAMAFRDINFKYQISGIDSRAWDFWSWQEFSV*ELYEEV*R*IRNLCFTQEGSS*FN*K  4239

Range 6: 4467 to 4661 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.0 bits(140) 0.0 35/65(54%) 0/65(0%) Minus/Plus
Query        2  KAHMILKKIELFWVLNRAIY*GCLKESHIGTTWRAGGL*IRCLIQDYPVTSKRAP*LPLLLITPF  196
                KAHM  K+   +   ++ IY*  L+ S  GTT RAGGL*I+CL  D  V S+RAP*L L LI PF
Subject   4467  KAHMTPKRTAQY*GPSKVIY*DYLRASPTGTTLRAGGL*IQCLSPDCHVISRRAP*LQLSLIMPF  4661

Range 7: 4309 to 4488 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.5 bits(106) 0.0 30/60(50%) 0/60(0%) Minus/Plus
Query      175  RYL*SLPQESYRPKGWSLRDL**SSAIPSWLHRSMSSCYSQ*RFHLSCW*PLSKHI*FSK  354
                R L*S+ Q+    KG  L DL** SA+ S L   +S  +++*RFH + W*PL KHI*  K
Subject   4309  RDL*SVSQKD*ESKGRPLCDL**GSAVSSRLC*PLSVNHTK*RFHFTRW*PLPKHI*LPK  4488

Range 8: 3690 to 4256 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
175.6 bits(377) 0.0 101/189(53%) 0/189(0%) Plus/Minus
Query      407  HPFLGPF*LNLLEPA*VRQMLQIFLQIXXXXXCIGNSFQLQMYQAQLSILFA*CQKLTLQQAKALNR*ISHHLSRQSDLPTSTPEVFPPFQNLENMLSLTRSEKAGQELIV*LFAAHPPLYFEARYQSSRHA*CVHSLCQTEQICARLD**PQSRH*HHIWRRCRKPQKLLPNTSYSDPPLDIALQRCD  973
                HPF   F*LN LEP+ V+Q L+I+LQ SS*SS   NS QLQ  QA+LSI   *  KL   +A A N *I  HLSRQ  L  + P  F PFQ+LE+ LS   S + GQE I  LF+ HPPL    RYQSS+HA  VH LCQTE  C R D**PQS H* H   +CR  +K   +TS S   L   LQ+CD
Subject   3690  HPFPDLF*LN*LEPSWVKQRLRIYLQTSS*SSYTENSCQLQKSQARLSIPEI*YLKLISLKAMAWNH*IFRHLSRQLSLLANIPAAFLPFQSLESKLSSIHSSRGGQEQIASLFSVHPPLCSAGRYQSSQHALYVH*LCQTELTCVR*D**PQSPH*CHT*HKCRTLRKPQRDTSCSGRHLGTILQKCD  4256

Range 9: 3327 to 3650 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
114.2 bits(243) 0.0 58/108(54%) 0/108(0%) Plus/Minus
Query     1013  HAFQVLMQWL*SCNH*EGHKVENDLTLNTKFHIEATHFPQTSSSPHIPVL**SVSHGA*RRIRQSFHFLHKHFHQVASVWLGSKELDQLVIHFPRTTLFLPSKPNRRC  1336
                H +Q L Q L*SC+H  GH VE+DL  +TKFHI+AT + QTS+S HI   **S SH A* RIR S   LHKH HQVA+   G  ELD   IHF +T +   SK    C
Subject   3327  HVYQALRQ*L*SCSHSMGHMVESDLIASTKFHIKATRYLQTSNSLHILE***STSHDA*CRIRLSSRSLHKHCHQVAAKQFGLTELDLQGIHFQQTNVCRLSKQAHLC  3650

Range 10: 4521 to 4661 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.3 bits(123) 0.0 26/47(55%) 0/47(0%) Plus/Minus
Query        2  KWRNQQKRQSWSPF*SYRVILNQTSDLQTSGSPSCTYMTFLQATSIY  142
                KW NQ+K QSWSP *+   +  QT D QTSGS  CT  T  Q  SIY
Subject   4521  KWHNQRKLQSWSPS*NDMAVWTQTLDSQTSGSQCCTCRTCPQVISIY  4661

Range 11: 4350 to 4487 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.2 bits(101) 0.0 22/46(48%) 0/46(0%) Plus/Minus
Query      176  FENHMCFDKGHQQER*KRHCE*QEDIDRCNQEGIAELHQRSRNDQP  313
                F +HMCF +GHQ+ +*KRH     D  + + E  AE HQRS N  P
Subject   4350  FGSHMCFGRGHQRVK*KRHFVWLTDKGQHSLEETAEPHQRSHNGLP  4487

Range 12: 3690 to 4190 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
138.1 bits(295) 0.0 87/167(52%) 0/167(0%) Minus/Plus
Query      473  ITSLKSYVKGGV*I*CIWQKLLRLSTSAPNVMSMARLRLLIQAGAYLLCLT*RMNTLGMSRRLVAGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLKGRKNFRGACWEV*LA**VMRNLTIQSLGLLECQLLTSSKEN*QLCLVHLELERVSYTRAS*RDLKEN  973
                IT LK+  K   * *CI  +L + ST   +V  M RLRL I A A  LCLT* MN  GM RRLV   + *RWM+ EK +D LLT   *  +R*  FQ LKG+K+ R  C E *LA**V +NL I S G    QL  S+  N*Q CL  LEL RV   RA *R LK N
Subject   3690  ITFLKNCAKVAA*T*CISLRLSKRSTFVLSVTLMGRLRLSILADACQLCLT*LMNI*GMLRRLVTARRA*RWMN*EK*SDLLLTSSR*MDRR*LTFQALKGQKSCRDVC*EA*LA**VTKNLMIPSHGFQGYQLQISNLGN*QSCLGLLELARVFCIRAL*RGLKVN  4190

Range 13: 3462 to 3653 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.7 bits(148) 0.0 39/64(61%) 0/64(0%) Minus/Plus
Query     1010  PYSALGTM*D*SL*HRNMR*AGSLGKMSGLYVEFCV*SQIIFNLVPLLMVA*LQPLHQHLEGVR  1201
                PYSALG M* *SL  +NM+* GSL   SGLYVEFC  +QI FN VP  M A* Q L Q L  V+
Subject   3462  PYSALGIM*G*SLSLQNMK*VGSLEIASGLYVEFCACNQITFNHVPH*MAA*SQLLPQRLVDVK  3653

Range 14: 4522 to 4662 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.0 bits(118) 0.0 26/47(55%) 0/47(0%) Minus/Plus
Query        1  YIEVA*RKVI*VQLGEPEVCKSDV*FKITL*LQKGLHDCRFC*LRHF  141
                YIE+ * +V+ VQ  EPEVC+S+V* +  +  Q+GLHDC F *L HF
Subject   4522  YIEIT*GQVLQVQH*EPEVCESNV*VQTAMSFQEGLHDCSFR*LCHF  4662

Range 15: 4227 to 4385 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.3 bits(75) 0.0 28/53(53%) 0/53(0%) Minus/Plus
Query      278  IQSKGT*KWMKSVXXXXXXXXXXRAGMSLPLKSSSGKLQA*RLVIA*SLMKFS  436
                IQ K   KWM + +W R+A+QR R G S PLK  S +L+ *R  I *SLM+FS
Subject   4227  IQLKEIWKWMMAAKWQRQASQRERVGTS*PLKCFSERLRI*RQAIV*SLMRFS  4385

Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome

Sequence ID: KR054734.1 Length: 8753 Number of Matches: 12

Range 1: 3310 to 4659 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1023.8 bits(2228) 0.0 420/450(93%) 0/450(0%) Minus/Plus
Query        3  VGFLLSTDGLALKAGIRSFVESESPVDPALSSPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGSGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAI  1352
                VGFLLSTDGLALKAGIRSFVESES VDP+LS+ T+ +QL +NAYAENEMIALFC+RHHVRLIIITPEYEVSWKFG++EWPLCGILCL+SNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCD+NGEIEVINPGGR+SALFDITNEHIRHVEKIG+GPQSIKVDELRKVKRSALDLLS+NGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWL+G+STSDIK RELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMD+ CKV KAGKSKKEGWDVVTFEVFLRK+  LKAGHCVIFDEVQLFPPGYIDLCLL IRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYN+ESRRFVNPMF+SRLPC+FKKGSMTAAFADYAI
Subject   3310  VGFLLSTDGLALKAGIRSFVESESLVDPSLSAQTVLRQLSDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPGGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSDIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKIANLKAGHCVIFDEVQLFPPGYIDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAI  4659

Range 2: 3462 to 4661 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
692.5 bits(1505) 0.0 329/400(82%) 0/400(0%) Plus/Minus
Query        1  KMA*SAKAAVMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSNLNISLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHXXXXXXXXXXEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVRPPNKHP*SFSALSKLGKYVIFDPFRESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQMXXXXXXXXXYIIFRPPP*HSSSKM*LVLGLHK*LSTSTSRLPSADAMAVIMQPLRGAQG*K*FDFKHKIPHRGHSFSPNFQLTSYSGVIMISLTWCLTQNK  1200
                K+A*SA AAVMEPFLK  G+L+SNIGFTNLRLS LYL D PSSNLNISLCSAP IA SF ESYVL*QGSPAREMKASLR+  R RS+*PGGNS*TSSK+TQ PAFR   FLR TSKVTTSQPSFFDLPAF TL  SSIS+SLLIEFARA LGET VTN PSDLF+KLLYRKL PAP VPSTTVNS  L+SEVD P S G ESLNFSSLITPV+PP+KHP SFSALSKLGK VIFDPF E RSRADR TF SSSTF+L GPLPIFSTCL+CS VMSNRADMRPPGL+TSISPL SHLAQMS ASKASA+YI+F+PPP*HSSS M* V GLH+*L TSTSRLPSA+A+AVIMQP  GAQG*K*FD KHKIPHRGHS SPNFQLTSYSGVIMISLT CL QNK
Subject   3462  KIA*SANAAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVL*QGSPAREMKASLRMVNRQRSI*PGGNS*TSSKMTQWPAFRFAIFLRNTSKVTTSQPSFFDLPAFATLQLSSISKSLLIEFARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLISEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTFLSSSTFMLCGPLPIFSTCLICSLVMSNRADMRPPGLMTSISPLISHLAQMSNASKASARYIMFKPPP*HSSSNM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHRGHSLSPNFQLTSYSGVIMISLT*CLMQNK  4661

Range 3: 3309 to 3425 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.0 bits(118) 0.0 23/39(59%) 0/39(0%) Plus/Minus
Query     1237  SCFRMVGLERAGSTGDSLSTNDLIPAFKAKPSVLRRKPT  1353
                SC + V  ++ GST DSLST + +PAFKA PSVL +KPT
Subject   3309  SCLKTVWADKDGSTRDSLSTKERMPAFKASPSVLNKKPT  3425

Range 4: 3310 to 4254 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
365.8 bits(792) 0.0 169/315(54%) 0/315(0%) Plus/Minus
Query      408  IHF*VPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSSKCTKHNCQFSLLDVRS*HSSKPRL*IVKFLITYHASQTSQQAPLKFFRPFKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPATNLLDMPNVFIRYVKQSRYAPAWINNLNLAIDITFGADVESLKSFCQIHHIQTPPLT*LFKDVIGAWPT*VIEHVHLTPSKC*CNGCNHATIKRGTRLKMI*L*TQNST*RPLIFPKLPAHLIFRCYNDQSHMVPNAE*GNHFIFCISIFTKLLPYGWARKSWINW*FTFHERPYSCLQSQTVGAEKKAN  1352
                IHF V F+*IC*SP  *+K Y+F+FR LH+ALV +  +SSK  KH+CQ S  D+RS*+S +P L IVK LITYH S    Q PL+ F PFKTWK+ YL* +  K+VKS SF+FSQLIHLY LR   NLL+M N+ + YVK S +APA +++LNL IDIT  A+V+  +SF +IHH+QT  LT LFK VI   P  V++++H T ++   + C+HA I  GTRLKMI*L   +ST RPL   KLP HLIF   NDQ HM+PNA+*G HF+ CISI T+L   G   + WI   FTF+ER Y+C QS+ +  +++ +
Subject   3310  IHFQVSFN*IC*SPSG*NKGYEFAFRPLHKALVQKAFTSSKGAKHDCQLSRFDIRS*YS*EPWLGIVKLLITYHTS*AP*QTPLQLFSPFKTWKVSYL*SIH*KEVKSRSFHFSQLIHLYALRAVANLLNMSNMLVGYVK*S*HAPARVDDLNLPIDITLSANVKCFESFSEIHHVQTTTLTQLFKYVICGGPAQVVKNIHFTSTERRGDSCDHAAI*WGTRLKMI*LQA*DSTQRPLAISKLPTHLIFWGNNDQPHMMPNAK*GYHFVLCISIITELPQNGLG*QRWIYKRFTFNERTYACFQSKPICTQQETH  4254

Range 5: 4300 to 4653 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
138.5 bits(296) 0.0 61/118(52%) 0/118(0%) Plus/Minus
Query        9  VISKSGSHGALFEVTG*S*IKHRIYKPPALQVVPI*LSFKQPQYIALFSTQNSSIFLRIICALTRVTSKRDESVTANNKKT*IDVTRRE*LNFIKDHAMTSL*ACNFPEEDFKGNDIP  362
                +ISK  SHGAL E+T  S +KH I+KPP L VVP+ L+ K  QYI L S+Q  +I L +ICALT +TSKR+ES+T+   +T +++  RE LN IK+ AM  L  CNFP++ FKG+++P
Subject   4300  IISKCCSHGALLEMTWQSGLKHWIHKPPTLNVVPVGLTLK*SQYITLLSSQYCAILLGVICALTGITSKRNESITSYG*QTKVNIAWREQLNLIKNDAMACLQVCNFPKKHFKGHNVP  4653

Range 6: 3324 to 4238 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
336.9 bits(729) 0.0 163/305(53%) 0/305(0%) Minus/Plus
Query      424  QHRRFGFEGRNKVVRGK*ITS*SSSFEPNHTEATW*KCLCRK*NDCLILR*APCETDHYNTGI*GELEVWGK*VASMWNFVFKVKSFSTLCPS*WLHDYSHCISTWKA*GGRAQLLM*AKHQSHL*RAMSRGGSEYDVFGRSF*GFRHLRQM*CQWRD*GY*SRRAHICSV*HNE*TH*ACREDW*RASKYKGG*AAKS*TISS*PAFSERVKDNIFSKF*KGGKTSGVLVGRSDWRDK**EI*RFKALACWSVNF*HQAKRIDSCAWYIWSWKEFPIQELHEEI*RKICNICLT*AGSSKFNQK  1338
                ++R   FE R+   R K*I+  S    PN  EA  * CLCR+ ND LIL *A CE DHY   I*GELEVW   VAS+WN +  VKSFSTLCP  WLHD+S+ +     * G + L + A H+SH+*RA+SR   E+DV   SF    HLR +* QW D*G+   RAH+ S+*HN+  +* C EDW R +++KGG*A KS TI S*P F+E +KDN+ SKF*KG K +GV     +W DK**E+*RF+A+A  ++NF*+Q  R+DS AW++WSW +  +QEL+EE+*R+I N+C T  GSSKFN K
Subject   3324  EYRWACFESRHTFFR*K*ISCRSIFVSPNRFEAAQ**CLCRERNDSLILH*ASCEADHYYPRI*GELEVWR*RVASVWNLMLAVKSFSTLCPIKWLHDHSYRLCAR*T*SGCS*LPVQALHKSHI*RAVSRWWFEHDVSR*SFRSI*HLR*V*YQWGD*GHQPWRAHVSSI*HNQRAY*TC*EDWQRPAEHKGG*AEKSETICS*PPFNEWIKDNLLSKF*KG*KAAGVFARGLNWCDK**EV*RFQAMALRNINF*YQISRVDSRAWHLWSW*KLSVQELYEEV*RQIRNLCFTQKGSSKFN*K  4238

Range 7: 4314 to 4652 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.0 bits(214) 0.0 55/113(49%) 0/113(0%) Minus/Plus
Query       10  L*SLPQESYRPKGWSLRDL**SSAIPSWLHRSMSSCYSQ*RFHLSCW*PLSKHI*FSKR*SYFGC*TERYIEVA*RKVI*VQLGEPEVCKSDV*FKITL*LQKGLHDCRFC*L  348
                L*S+  E+ +P+G  LR  ** S +PS L+  +S  +++* FH SCW* LSKHI*  K     G * E YIE+ *  V+ VQ  E EVC+S+V* +  +  Q+GLHDC  C*L
Subject   4314  L*SVS*ENCKPEGRPLRHF**GSTVPSRLY*PLSVNHTK*CFHFSCW*SLSKHI*LPKGSRNTGS*AE*YIEIT*G*VLQVQH*ESEVCESNV*VQTAMSFQEGLHDCSIC*L  4652

Range 8: 3341 to 4255 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
304.4 bits(658) 0.0 164/305(54%) 0/305(0%) Plus/Minus
Query      407  HPFLGPF*LNLLEPA*VRQMLQIFLQIXXXXXCIGNSFQLQMYQAQLSILFA*CQKLTLQQAKALNR*ISHHLSRQSDLPTSTPEVFPPFQNLENMLSLTRSEKAGQELIV*LFAAHPPLYFEARYQSSRHA*CVHSLCQTEQICARLD**PQSRH*HHIWRRCRKPQKLLPNTSYSDPPLDIALQRCDWCLAYISN*ARPPHAFQVLMQWL*SCNH*EGHKVENDLTLNTKFHIEATHFPQTSSSPHIPVL**SVSHGA*RRIRQSFHFLHKHFHQVASVWLGSKELDQLVIHFPRTTLFLPSK  1321
                HPF   F*LNLLEP  V+Q L+I LQ SS*SSC  + +QLQ  QA+LS L  * QKL   +A A NR* SHHLS Q     +TP  F PFQNLE+ LSL  S K GQE IV LF+AHPPL    R QSS+H *    LCQ E  CAR  **PQS H*+H  R+C+  +KL  +TS S+  LD ALQ CD   A   +*  P H ++   + L*SC+H  GHKVENDLT + +FH EAT + QTS+SPHI   **S SH A* +IR SF  LHKH+H  AS   G  ++D   IHF R  + L SK
Subject   3341  HPFPSLF*LNLLEPFWVKQRLRICLQTSS*SSCTESFYQLQRCQARLSTLEI*YQKLIFLRAMAWNR*TSHHLSHQLSPLANTPAAFQPFQNLESKLSLIHSLKGGQEQIVSLFSAHPPLCSAGRCQSSQHV*YARWLCQIELTCARQG**PQSPH*YHT*RKCQMLRKLQRDTSCSNHHLDTALQICDLWRACTGS*EHPLHVYRAQRR*L*SCSHLMGHKVENDLTASIRFHTEATRYLQTSNSPHILG***SASHDA*CKIRLSFRSLHKHYH*AASKRFGLTKMDLQEIHFQRKNVCLLSK  4255

Range 9: 4349 to 4651 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.2 bits(208) 0.0 48/101(48%) 0/101(0%) Plus/Minus
Query       11  NQQKRQSWSPF*SYRVILNQTSDLQTSGSPSCTYMTFLQATSIYRSVQHPK*LYLFENHMCFDKGHQQER*KRHCE*QEDIDRCNQEGIAELHQRSRNDQP  313
                NQQ  QSWSP *+   +  QT D QTS S  CT  T+ Q  SIY S Q P     F +HMCFD+ HQQE+*K H     D  + + EG  E HQ+ RN  P
Subject   4349  NQQMLQSWSPS*NDMAVWTQTLDSQTSDSQCCTCRTYPQVISIYHSAQLPVLRDPFGSHMCFDRDHQQEK*KHHFVWLTDKGQYSLEGTVEPHQK*RNGLP  4651

Range 10: 3461 to 4189 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
209.1 bits(450) 0.0 133/243(55%) 0/243(0%) Minus/Plus
Query      473  PYSALGTM*D*SL*HRNMR*AGSLGKMSGLYVEFCV*SQIIFNLVPLLMVA*LQPLHQHLEGVRWTCSITYVGQAPITSLKSYVKGGV*I*CIWQKLLRLSTSAPNVMSMARLRLLIQAGAYLLCLT*RMNTLGMSRRLVAGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLKGRKNFRGACWEV*LA**VMRNLTIQSLGLLECQLLTSSKEN*QLCLVHLELERVSYTRAS*RDLKEN  1201
                PY ALG M* *SL  +NMR* GSL   SGL VE    SQIIFNLVP  M A* Q        V+W    T  G   IT LKS VK  V* *CI  KL +  T A +V+SM RLR    AGA  L LT*  + L M RRL    + *RWMS EK ND LLT F *  QR*  FQVLKG K+ RG C   *L **VMR+LTI S G  E QLL S+ E+*Q CL  LEL +   TRA *R LK N
Subject   3461  PYFALGIM*G*SLLPQNMR*VGSLEIASGLCVESYACSQIIFNLVPH*MAA*SQLSPLRSVDVKWMFLTTCAGPPQITYLKSCVKVVV*T*CISLKLSKHLTFALSVISMGRLRSSTLAGACQLYLT*PTSILDMLRRLATARRA*RWMS*EK*NDLLLTSFQ*MDQR*LTFQVLKGLKSCRGVC*GA*LV**VMRSLTIPSHGSQEYQLLISNLES*QSCLAPLELVKAFCTRAL*RGLKAN  4189

Range 11: 4466 to 4651 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.0 bits(153) 0.0 36/62(58%) 0/62(0%) Minus/Plus
Query       11  KAHMILKKIELFWVLNRAIY*GCLKESHIGTTWRAGGL*IRCLIQDYPVTSKRAP*LPLLLI  196
                KAHM  K+I  +W L+R IY*  L+ S  GTT R GGL*I+CL  D  V S+RAP*L  LLI
Subject   4466  KAHMTPKRIAQYWELSRVIY*DYLRVSPTGTTLRVGGL*IQCLSPDCHVISRRAP*LQHLLI  4651

Range 12: 4313 to 4393 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.9 bits(61) 0.0 16/27(59%) 0/27(0%) Minus/Plus
Query      269  PLKSSSGKLQA*RLVIA*SLMKFSYSL  349
                PLK   GKLQ *R  IA  LM+F+ SL
Subject   4313  PLKCFLGKLQT*RQAIASFLMRFNCSL  4393

Nucleotide Sequence (443 letters)

Query ID:ds2016-132_4
Query definition:No definition line
Query length:951
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 16 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
45
90
135
180
225
270
315
360
405
443

Descriptions

Alignments

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OB1

Sequence ID: AB277783.1 Length: 2876 Number of Matches: 9

Range 1: 584 to 1024 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
349.3 bits(756) 0.0 146/147(99%) 0/147(0%) Plus/Plus
Query        2  WERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGIYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGR  442
                WERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALS+WHGVIIMNNLVKALSTFEFVGIYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGR
Subject    584  WERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHGVIIMNNLVKALSTFEFVGIYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGR  1024

Range 2: 584 to 1024 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
343.8 bits(744) 0.0 142/147(97%) 0/147(0%) Minus/Minus
Query        2  PPREVGSVGNAGRKGYETLVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*IIHNNHTMPNT*GLIYSFKQPRN*APHLVLISN*EPHTVVVCLNFLFIHHFN*QLAQPVGIGYLNCIVINAVLQVTHFTSNANSLP  442
                PPREVGSVGNAGRKGYETLVLSDKFSY*T FTTTRNA+NNNWKSEHAINTHKLKRRQSFN*+IHNNHTMPNT*GLIYSFKQPRN*APHLV ISN*EPHTVVVC NFLFIHHFN*QLAQPVGIGYLNCIVINAVLQVTHFTSNANSLP
Subject    584  PPREVGSVGNAGRKGYETLVLSDKFSY*TAFTTTRNAVNNNWKSEHAINTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQPRN*APHLVFISN*EPHTVVVCFNFLFIHHFN*QLAQPVGIGYLNCIVINAVLQVTHFTSNANSLP  1024

Range 3: 585 to 965 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
287.0 bits(620) 0.0 121/127(95%) 0/127(0%) Minus/Minus
Query        3  PQ*QVLLLNYFYHYQERYEQQLEI*ARYKYPQTQT*TKL*LNYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*LGTAHSCSVPQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFHEQCKFSP  383
                PQ*QVLLLN FYHYQER EQQLEI*ARYKYPQTQT*TKL*L+YS**SHHAK+LRPNL*LQTTQKLSTSSC YF*LGTAHSCSV QLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFHEQCKFSP
Subject    585  PQ*QVLLLNCFYHYQERCEQQLEI*ARYKYPQTQT*TKL*LSYS**SHHAKYLRPNL*LQTTQKLSTSSCVYF*LGTAHSCSVLQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFHEQCKFSP  965

Range 4: 958 to 1023 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.6 bits(104) 0.0 22/22(100%) 0/22(0%) Minus/Minus
Query      376  LPERLGVSGTPAVKAMKLSSSV  441
                LPERLGVSGTPAVKAMKLSSSV
Subject    958  LPERLGVSGTPAVKAMKLSSSV  1023

Range 5: 583 to 1023 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
292.0 bits(631) 0.0 141/147(96%) 0/147(0%) Plus/Plus
Query        1  LGENLHCS*NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*GTLQLCAVPS*K*AQDEVLNFWVV*SYRLGLKCLAWCDYYE*FS*SFVYV*VCGYL*RAQIXXXXXXXXXXX*K*FNKRTCH*GREFHSLYGRRSRHSQPLWE  441
                LGENLHCS*NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS* TLQLCAVPS*K* QDEVLNFWVV*SYRLGLK LAWCDYYE* S*SFVYV*VCGYL*RAQISSCCS RSW*W*K FNKRTCH*GREFHSLYGRRSRHSQPLWE
Subject    583  LGENLHCS*NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*STLQLCAVPS*K*TQDEVLNFWVV*SYRLGLKYLAWCDYYE*LS*SFVYV*VCGYL*RAQISSCCSQRSW*W*KQFNKRTCH*GREFHSLYGRRSRHSQPLWE  1023

Range 6: 585 to 827 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
184.4 bits(396) 0.0 79/81(98%) 0/81(0%) Plus/Plus
Query        3  GREFALLVKWVTWRTALITMQLRYPMPTGWASCQLK**MKRKLRHTTTVCGS*LEISTR*GAQFLGCLKL*IRP*VFGMV*  245
                GREFALLVKWVTWRTALITMQLRYPMPTGWASCQLK**MKRKL+HTTTVCGS*LEI+TR*GAQFLGCLKL*IRP*VFGMV*
Subject    585  GREFALLVKWVTWRTALITMQLRYPMPTGWASCQLK**MKRKLKHTTTVCGS*LEINTR*GAQFLGCLKL*IRP*VFGMV*  827

Range 7: 873 to 1025 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
94.5 bits(200) 0.0 49/51(96%) 0/51(0%) Plus/Plus
Query      291  WVFIACSDFQLLFIAFLXXXXXXXXENLSLRTRVS*PLRPAFPTLPTSLGG  443
                WVFIACSDFQLLF AFLVVVK V**ENLSLRTRVS*PLRPAFPTLPTSLGG
Subject    873  WVFIACSDFQLLFTAFLVVVKAV**ENLSLRTRVS*PLRPAFPTLPTSLGG  1025

Range 8: 583 to 876 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
211.4 bits(455) 0.0 97/98(99%) 0/98(0%) Minus/Minus
Query        1  PTNSNVDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISRAMQILSQ  294
                PTNSNVDKALTKLFIIITPCQ LKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISRAMQILSQ
Subject    583  PTNSNVDKALTKLFIIITPCQILKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISRAMQILSQ  876

Range 9: 1002 to 1025 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.8 bits(50) 0.0 8/8(100%) 0/8(0%) Minus/Minus
Query      420  TSQRGWEC  443
                TSQRGWEC
Subject   1002  TSQRGWEC  1025

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 10

Range 1: 6328 to 6768 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
346.6 bits(750) 0.0 144/147(98%) 0/147(0%) Plus/Plus
Query        2  WERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGIYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGR  442
                WERICIAREMGNLENCIDNYAIEVSYAYRLGEL+IEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVG+YSVLRFPVVVHSVPGSGKSSLIRELVTEDE+FIAFTAGVPDTPNLSGR
Subject   6328  WERICIAREMGNLENCIDNYAIEVSYAYRLGELAIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELVTEDENFIAFTAGVPDTPNLSGR  6768

Range 2: 6328 to 6768 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
338.8 bits(733) 0.0 141/147(96%) 0/147(0%) Minus/Minus
Query        2  PPREVGSVGNAGRKGYETLVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*IIHNNHTMPNT*GLIYSFKQPRN*APHLVLISN*EPHTVVVCLNFLFIHHFN*QLAQPVGIGYLNCIVINAVLQVTHFTSNANSLP  442
                PPREVG V NAGRKGYE LVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*+IHNNHTMPNT*GLIYSFKQPRN*APHLVLISN*EPHTVVVC NFLFIHHFN QLAQPVGIGYLNCIVINAVLQVTHFTSNANSLP
Subject   6328  PPREVGCVRNAGRKGYEILVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQPRN*APHLVLISN*EPHTVVVCFNFLFIHHFNCQLAQPVGIGYLNCIVINAVLQVTHFTSNANSLP  6768

Range 3: 6329 to 6709 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
294.8 bits(637) 0.0 123/127(97%) 0/127(0%) Minus/Minus
Query        3  PQ*QVLLLNYFYHYQERYEQQLEI*ARYKYPQTQT*TKL*LNYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*LGTAHSCSVPQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFHEQCKFSP  383
                PQ*QVLLLNYFYHYQERYEQQLEI*ARYK+PQTQT*TKL*L+YS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*LGTAHSCSV QLPLHSSFQL TRPACRHRIPQLHSYQCSSPGYPFHEQCKFSP
Subject   6329  PQ*QVLLLNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*LGTAHSCSVLQLPLHSSFQLPTRPACRHRIPQLHSYQCSSPGYPFHEQCKFSP  6709

Range 4: 6702 to 6767 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 21/22(95%) 0/22(0%) Minus/Minus
Query      376  LPERLGVSGTPAVKAMKLSSSV  441
                LPERLGVSGTPAVKAMK SSSV
Subject   6702  LPERLGVSGTPAVKAMKFSSSV  6767

Range 5: 6327 to 6641 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
224.2 bits(483) 0.0 101/105(96%) 0/105(0%) Plus/Plus
Query        1  LGENLHCS*NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*GTLQLCAVPS*K*AQDEVLNFWVV*SYRLGLKCLAWCDYYE*FS*SFVYV*VCGYL*RAQI  315
                LGENLHCS*NG*PGELH**LCN*GILCLQAGRV N*NDE*RGS* TLQLCAVPS*K*AQDEVLNFWVV*SYRLGLKCLAWCDYYE* S*SFVYV*VCG L*RAQI
Subject   6327  LGENLHCS*NG*PGELH**LCN*GILCLQAGRVGN*NDE*RGS*STLQLCAVPS*K*AQDEVLNFWVV*SYRLGLKCLAWCDYYE*LS*SFVYV*VCGCL*RAQI  6641

Range 6: 6617 to 6769 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
88.6 bits(187) 0.0 48/51(94%) 0/51(0%) Plus/Plus
Query      291  WVFIACSDFQLLFIAFLXXXXXXXXENLSLRTRVS*PLRPAFPTLPTSLGG  443
                WVFIACSDFQLLFIAFLVVVKVV**ENLSLRTR+S*PLRPAF T PTSLGG
Subject   6617  WVFIACSDFQLLFIAFLVVVKVV**ENLSLRTRIS*PLRPAFLTHPTSLGG  6769

Range 7: 6329 to 6571 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
180.7 bits(388) 0.0 79/81(98%) 0/81(0%) Plus/Plus
Query        3  GREFALLVKWVTWRTALITMQLRYPMPTGWASCQLK**MKRKLRHTTTVCGS*LEISTR*GAQFLGCLKL*IRP*VFGMV*  245
                GREFALLVKWVTWRTALITMQLRYPMPTGWAS QLK**MKRKL+HTTTVCGS*LEISTR*GAQFLGCLKL*IRP*VFGMV*
Subject   6329  GREFALLVKWVTWRTALITMQLRYPMPTGWASWQLK**MKRKLKHTTTVCGS*LEISTR*GAQFLGCLKL*IRP*VFGMV*  6571

Range 8: 6675 to 6767 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.5 bits(154) 0.0 29/31(94%) 0/31(0%) Plus/Plus
Query      349  *K*FNKRTCH*GREFHSLYGRRSRHSQPLWE  441
                *K*FNKRTCH*GREFHSLYGRRS H+QPLWE
Subject   6675  *K*FNKRTCH*GREFHSLYGRRS*HTQPLWE  6767

Range 9: 6327 to 6620 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
210.5 bits(453) 0.0 97/98(99%) 0/98(0%) Minus/Minus
Query        1  PTNSNVDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISRAMQILSQ  294
                PTNSNVDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISI NSPSL*A*DTSIA*LSMQFSRLPISRAMQILSQ
Subject   6327  PTNSNVDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIANSPSL*A*DTSIA*LSMQFSRLPISRAMQILSQ  6620

Range 10: 6746 to 6769 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
22.6 bits(43) 0.0 7/8(88%) 0/8(0%) Minus/Minus
Query      420  TSQRGWEC  443
                TSQRGW C
Subject   6746  TSQRGWVC  6769

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 9

Range 1: 6328 to 6768 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
341.1 bits(738) 0.0 143/147(97%) 0/147(0%) Plus/Plus
Query        2  WERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGIYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGR  442
                WERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWH  IIMNNLVKALSTFEFVG+YSVLRFPVVVHSVPGSGKSSLIREL+TEDESFIAFTAGVPDTPNLSGR
Subject   6328  WERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHY*IIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGVPDTPNLSGR  6768

Range 2: 6328 to 6768 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
298.4 bits(645) 0.0 125/147(85%) 0/147(0%) Minus/Minus
Query        2  PPREVGSVGNAGRKGYETLVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*IIHNNHTMPNT*GLIYSFKQPRN*APHLVLISN*EPHTVVVCLNFLFIHHFN*QLAQPVGIGYLNCIVINAVLQVTHFTSNANSLP  442
                PPR+V SVGNAGR+ YETLV S++ SY TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*+IHNN  MPNT*GLIYSFKQ RN*A HLVLISN EPHTVVV  NFLFIHHFN*QLAQPVGIG+LNCI+INA+ QV HFTSNANSLP
Subject   6328  PPRKVWSVGNAGRESYETLVFSNELSYQTTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNLIMPNT*GLIYSFKQSRN*ASHLVLISNQEPHTVVVRFNFLFIHHFN*QLAQPVGIGHLNCIIINAIFQVAHFTSNANSLP  6768

Range 3: 6329 to 6706 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
254.9 bits(550) 0.0 108/126(86%) 0/126(0%) Minus/Minus
Query        3  Q*QVLLLNYFYHYQERYEQQLEI*ARYKYPQTQT*TKL*LNYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*LGTAHSCSVPQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFHEQCKFSP  380
                Q*  LL NYFYHYQERYEQQLEI*ARYK+PQTQT*TKL*L+YS**S++AKHLRPNL*LQT QKLS SSCAYF* GTAHSCS  QLPLHSSFQLTTRP CRHR PQLH+YQC+ PG PFHEQCKFSP
Subject   6329  Q**ALLSNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SNNAKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQLPLHSSFQLTTRPTCRHRTPQLHNYQCNFPGCPFHEQCKFSP  6706

Range 4: 6702 to 6767 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 21/22(95%) 0/22(0%) Minus/Minus
Query      376  LPERLGVSGTPAVKAMKLSSSV  441
                LPER GVSGTPAVKAMKLSSSV
Subject   6702  LPERFGVSGTPAVKAMKLSSSV  6767

Range 5: 6327 to 6641 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
204.5 bits(440) 0.0 92/105(88%) 0/105(0%) Plus/Plus
Query        1  LGENLHCS*NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*GTLQLCAVPS*K*AQDEVLNFWVV*SYRLGLKCLAWCDYYE*FS*SFVYV*VCGYL*RAQI  315
                LGENLHCS*NG PG+LH**LCN*G+LCLQ GRVVN*NDE*RGS*  LQLCAVP *K*AQDE+LNFW+V*SYRLGLKCLA  DYYE* S*SFVYV*VCG L*RAQI
Subject   6327  LGENLHCS*NGQPGKLH**LCN*GVLCLQVGRVVN*NDE*RGS*SALQLCAVPG*K*AQDEMLNFWIV*SYRLGLKCLALLDYYE*LS*SFVYV*VCGCL*RAQI  6641

Range 6: 6617 to 6769 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.9 bits(155) 0.0 43/51(84%) 0/51(0%) Plus/Plus
Query      291  WVFIACSDFQLLFIAFLXXXXXXXXENLSLRTRVS*PLRPAFPTLPTSLGG  443
                WVFIACSDFQLLFIAFLVVVKVV**E+  L+TRVS*  RPAFPTL T LGG
Subject   6617  WVFIACSDFQLLFIAFLVVVKVV**ESSLLKTRVS*LSRPAFPTLQTFLGG  6769

Range 7: 6327 to 6620 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
203.6 bits(438) 0.0 95/98(97%) 0/98(0%) Minus/Minus
Query        1  PTNSNVDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISRAMQILSQ  294
                PTNSNVDKALTKLFIII  CQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSP+L*A*DTSIA*LSMQFSRLPISRAMQILSQ
Subject   6327  PTNSNVDKALTKLFIII**CQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSMQFSRLPISRAMQILSQ  6620

Range 8: 6329 to 6568 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
157.8 bits(338) 0.0 68/80(85%) 0/80(0%) Plus/Plus
Query        3  GREFALLVKWVTWRTALITMQLRYPMPTGWASCQLK**MKRKLRHTTTVCGS*LEISTR*GAQFLGCLKL*IRP*VFGMV  242
                GREFALLVKW TW+ ALI MQLR PMPTGWASCQLK**MKRKL+ TTTVCGS LEISTR* AQFL CLKL*IRP*VFG++
Subject   6329  GREFALLVKWATWKIALIIMQLRCPMPTGWASCQLK**MKRKLKRTTTVCGSWLEISTR*DAQFLDCLKL*IRP*VFGII  6568

Range 9: 6675 to 6767 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.7 bits(113) 0.0 22/31(71%) 0/31(0%) Plus/Plus
Query      349  *K*FNKRTCH*GREFHSLYGRRSRHSQPLWE  441
                *K*F+KR  +* REFHS +GRRSRHS+P WE
Subject   6675  *K*FDKRAHY*RREFHSFHGRRSRHSKPFWE  6767

Grapevine Rupestris stem pitting associated virus, complete genome

Sequence ID: AF026278.1 Length: 8725 Number of Matches: 8

Range 1: 6328 to 6768 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
327.3 bits(708) 0.0 133/147(90%) 0/147(0%) Plus/Plus
Query        2  WERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGIYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGR  442
                WERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMM EEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALS+WH + IMNNLVKALSTFEFVG++SVL+FPVV+HSVPGSGKSSLIREL++EDE+FIAFTAGVPD+PNL+GR
Subject   6328  WERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHYLSIMNNLVKALSTFEFVGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGR  6768

Range 2: 6327 to 6620 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
164.2 bits(352) 0.0 79/98(81%) 0/98(0%) Minus/Minus
Query        1  PTNSNVDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISRAMQILSQ  294
                PTNSNVD ALTKLFII+  CQ LKA*SIASN PEIEHLILCLFLT+N TQL* ASTSSS IIS+D+SPS  A*+TSIA*LS+QFSRLPIS AM I SQ
Subject   6327  PTNSNVDNALTKLFIILK*CQILKA*SIASNRPEIEHLILCLFLTKNLTQL*WASTSSSVIISMDSSPSRYA*ETSIA*LSIQFSRLPISLAMHIRSQ  6620

Range 3: 6705 to 6767 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
42.3 bits(86) 0.0 18/21(86%) 0/21(0%) Minus/Minus
Query      379  LPERLGVSGTPAVKAMKLSSS  441
                LP RLG+SGTPAVKAMK SSS
Subject   6705  LPVRLGLSGTPAVKAMKFSSS  6767

Range 4: 6328 to 6768 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
167.4 bits(359) 0.0 78/147(53%) 0/147(0%) Minus/Minus
Query        2  PPREVGSVGNAGRKGYETLVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*IIHNNHTMPNT*GLIYSFKQPRN*APHLVLISN*EPHTVVVCLNFLFIHHFN*QLAQPVGIGYLNCIVINAVLQVTHFTSNANSLP  442
                P  E+ +V N   + YE L+L +   Y*TTFTTTR+ MN+ WK +H  NT+KLK  Q FN*IIHN   MPNT*GLI  FK   N*A HL+L+ + E +T+++ L+F   HHFN  L+QPV IG L  I++N +LQVTH  SNA  LP
Subject   6328  PSCEIRAVWNTCCESYEILILGN*LPY*TTFTTTRHTMNDYWKFKHTENTYKLKC*QCFN*IIHNTQIMPNT*GLINRFK*A*N*ASHLMLVPDQESNTIIMGLHFFLGHHFNG*LSQPVRIGDLYRIIVNTILQVTHLPSNAYPLP  6768

Range 5: 6329 to 6691 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
119.3 bits(254) 0.0 66/121(55%) 0/121(0%) Minus/Minus
Query        3  LLNYFYHYQERYEQQLEI*ARYKYPQTQT*TKL*LNYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*LGTAHSCSVPQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFHEQCKFSP  365
                LLNYFYHYQ  YE  LEI*A  K+ QTQ  T L*LNYS* S++AK+LRPN  LQ   KLS SS A  *    H+ + P L   SSFQ    PA  HR P  H+ Q +SPGYP   QC  +P
Subject   6329  LLNYFYHYQAHYE*LLEI*AH*KHLQTQMLTML*LNYS*YSNNAKYLRPNQSLQIGLKLSISSYACS*PRI*HNYNGPPLLPRSSFQWIALPAGTHRRPLSHNCQYNSPGYPSP*QCISAP  6691

Range 6: 6327 to 6617 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.4 bits(215) 0.0 53/97(55%) 0/97(0%) Plus/Plus
Query        1  LGENLHCS*NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*GTLQLCAVPS*K*AQDEVLNFWVV*SYRLGLKCLAWCDYYE*FS*SFVYV*VC  291
                LG ++HC  +G*PGEL+* LC+ G+LC+ AGR ++*ND+   S G L LC +   + A DE+LNF  +*S  LGLK LA  +YYE*FS*S V +*VC
Subject   6327  LGADMHC*GDG*PGELY*QLCDRGLLCVPAGRAIH*NDDRGRSGGPL*LC*ILGQEQA*DEMLNFRPI*SD*LGLKYLALFEYYE*FS*SIVNI*VC  6617

Range 7: 6675 to 6746 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
26.7 bits(52) 0.0 14/24(58%) 0/24(0%) Plus/Plus
Query      349  *K*FNKRTCH*GREFHSLYGRRSR  420
                *K*FNK     G EFHS + R SR
Subject   6675  *K*FNKGANFRG*EFHSFHSRCSR  6746

Range 8: 6329 to 6571 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.0 bits(164) 0.0 42/81(52%) 0/81(0%) Plus/Plus
Query        3  GREFALLVKWVTWRTALITMQLRYPMPTGWASCQLK**MKRKLRHTTTVCGS*LEISTR*GAQFLGCLKL*IRP*VFGMV*  245
                G  +ALL +WVTWR  L  M+ R PM TGW S  LK** ++K R    V  S    S R* AQF   LK  IRP*VFG++*
Subject   6329  GSGYALLGRWVTWRIVLTIMR*RSPMRTGWESYPLK**PRKKWRPIIIVLDSWSGTSIR*DAQFQAYLKRLIRP*VFGII*  6571

Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome

Sequence ID: JX559646.1 Length: 8726 Number of Matches: 8

Range 1: 6328 to 6768 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
327.3 bits(708) 0.0 131/147(89%) 0/147(0%) Plus/Plus
Query        2  WERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGIYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGR  442
                WERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMM EEEVEAHYNCVRFLVRNKHKMRCSISGLFEA+D*ALS+WH + IMNNLVKALSTFEF+G++SVL+FPVV+HSVPGSGKSSLIREL++EDESF+AFTAGVPD+PNL+GR
Subject   6328  WERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAVD*ALSIWHCLSIMNNLVKALSTFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGR  6768

Range 2: 6327 to 6620 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
169.2 bits(363) 0.0 80/98(82%) 0/98(0%) Minus/Minus
Query        1  PTNSNVDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISRAMQILSQ  294
                P NS VD ALTKLFII+  CQ LKA*S ASN PEIEHLILCLFLTRN TQL*CASTSSS IIS+D+SP+L A*DTSIA*LSMQFSRLPIS AM I SQ
Subject   6327  PINSKVDNALTKLFIILKQCQILKA*STASNRPEIEHLILCLFLTRNLTQL*CASTSSSVIISMDSSPNLYA*DTSIA*LSMQFSRLPISLAMHIRSQ  6620

Range 3: 6705 to 6767 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.4 bits(84) 0.0 18/21(86%) 0/21(0%) Minus/Minus
Query      379  LPERLGVSGTPAVKAMKLSSS  441
                LP RLG+SGTPAVKA KLSSS
Subject   6705  LPVRLGLSGTPAVKATKLSSS  6767

Range 4: 6328 to 6768 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
171.1 bits(367) 0.0 80/147(54%) 0/147(0%) Minus/Minus
Query        2  PPREVGSVGNAGRKGYETLVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*IIHNNHTMPNT*GLIYSFKQPRN*APHLVLISN*EPHTVVVCLNFLFIHHFN*QLAQPVGIGYLNCIVINAVLQVTHFTSNANSLP  442
                P  EV ++ N   + +ETLVL D   Y*TT TT R  M N+WK +H  NT+K +  Q FN IIHN  TMPNT*GLI  FK   N*APHL+L+ N*EPHT+VVCL+ L  HHF+  L Q + IG+L  I+INAVL + H +  A SLP
Subject   6328  PSCEVRTIWNTCCESHETLVL*D*LPY*TTLTTARYTMYNDWKFKHTENTYKFEG*QCFNQIIHNTQTMPNT*GLINRFK*A*N*APHLMLVPN*EPHTIVVCLHLLLCHHFDG*LTQSICIGHLYRIIINAVL*IAHLSGYAYSLP  6768

Range 5: 6329 to 6691 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.8 bits(253) 0.0 64/121(53%) 0/121(0%) Minus/Minus
Query        3  LLNYFYHYQERYEQQLEI*ARYKYPQTQT*TKL*LNYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*LGTAHSCSVPQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFHEQCKFSP  365
                LLNY YH Q  Y  +LEI*A  K+   +  T L* NYS* S++AK+LRPN  LQ   KLSTSS A  *LGT+H+CSVP  P  SSF+    P   HR P  H+YQCSS   P    C F+P
Subject   6329  LLNYSYHCQVHYV*RLEI*AH*KHL*IRRLTML*PNYS*YSNNAKYLRPNQPLQIGLKLSTSSYACS*LGTSHNCSVPPPPPLSSFRWIAHPIYMHRTPLSHNYQCSSLDCPSLWLCIFAP  6691

Range 6: 6327 to 6602 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
99.1 bits(210) 0.0 52/92(57%) 0/92(0%) Plus/Plus
Query        1  LGENLHCS*NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*GTLQLCAVPS*K*AQDEVLNFWVV*SYRLGLKCLAWCDYYE*FS*SFV  276
                LG N+H   +G   ELH**LC+ G+LC+  G  ++ ND+  G  GTLQLC VPS*+ A DEVLNF  +*S  LGLK LA  +YYE*F *S V
Subject   6327  LGANMHSQRDGQSRELH**LCDRGVLCI*IG*AIHRNDDRGGGGGTLQLCEVPS*EQA*DEVLNFRPI*SG*LGLKYLALFEYYE*FG*SIV  6602

Range 7: 6675 to 6758 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.0 bits(46) 0.0 14/28(50%) 0/28(0%) Plus/Plus
Query      349  *K*FNKRTCH*GREFHSLYGRRSRHSQP  432
                *+*FNK     GREF   + R SR S P
Subject   6675  *E*FNKGVNLRGREFRGFHSRCSR*S*P  6758

Range 8: 6329 to 6571 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.5 bits(176) 0.0 46/81(57%) 0/81(0%) Plus/Plus
Query        3  GREFALLVKWVTWRTALITMQLRYPMPTGWASCQLK**MKRKLRHTTTVCGS*LEISTR*GAQFLGCLKL*IRP*VFGMV*  245
                G E+A   +W   RTALI M+ R PM   W S   K** +R+ RHTT V GS*L  S R*GAQF   LK  IRP*VFG+V*
Subject   6329  GSEYA*PERWAI*RTALIIMR*RCPMHIDWVSYPSK**QRRRWRHTTIV*GS*LGTSIR*GAQFQAYLKRLIRP*VFGIV*  6571

Nucleotide Sequence (1147 letters)

Query ID:ds2016-132_4
Query definition:No definition line
Query length:951
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 16 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
115
230
345
460
575
690
805
920
1035
1147

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate VF1, partial genome

Sequence ID: KT948710.1 Length: 8716 Number of Matches: 14

Range 1: 6707 to 7852 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
604.1 bits(1312) 0.0 263/382(69%) 0/382(0%) Minus/Plus
Query        2  EDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPVDDWLGHWLGAAFPKKVKFAILRGQHTSISTWRAL*GRHQKHNILWSQTVIPKLWAFWSV*EFCAFNNCNSINGLHICTICLEFWFL*ALQLQP*SLHMSTAIMVIIMVVS*GLQGSQY*LRIVAQVRRLLQQLRKCWEV*RL*GLAXXXXXXXXXXXXXIWRAHQEGCQVSQMKLLRPD*NLWSWQG  1147
                EDESF+AFTAGVPD+PNL+GRYIKPYSPGC V+GKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIK+KTCRFG NTCKYL SFGF++HSDR D V+ GSPFELDVEGVLICFGKEAVDLA AHNSDFKLPCEVRG+TF+VVTLLKSRDPTS+DKHWFY+AATRHR KLIIMQ*+AF ATC+LG +++ ++ W GHW+G+   +KVKFAI R QH+ +ST  AL GRH+++N+LWS  VIPK    WSV +F  FN        H C I LEFW  * LQL   SLHM TA++V I  VS*   GSQY*L+I  Q R  L QL++CW V*RL*GLA  + KLI +V  V W+   E C  SQMK ++PD  L S QG
Subject   6707  EDESFVAFTAGVPDSPNLTGRYIKPYSPGCVVQGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKTKTCRFGANTCKYLQSFGFDVHSDRVDAVVIGSPFELDVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFNVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*DAFPATCQLG*DHNSINHWPGHWIGSTLLEKVKFAIFR*QHSPVSTRGALQGRHKEYNLLWS*AVIPKFRDIWSVRKFRTFNTSRDSGRFHTCIISLEFWS**ELQLPSKSLHM*TAVVVTIKAVS*EPPGSQY*LKIADQARP*LLQLKRCWVV*RL*GLAKKLMKLITVVERVKWQVKLESCLASQMKHMKPDLRL*S*QG  7852

Range 2: 6709 to 7272 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
303.9 bits(657) 0.0 136/188(72%) 0/188(0%) Plus/Minus
Query      582  PNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLIF*YGSENNTSKPEMSLTDRYSSSMFIFPFTAQPGEYGLMYLPERLGVSGTPAVKAMKLSS  1145
                P+ QVA KA HC++I+   CLVAA *NQCLSSEVGSLDFN VTT NV PRTSQG+LKSELCA A+STAS PKQ+ TPSTS+SNG+P+ T+S LSL   KPKD RYL V +PNLQV  FMK ASLGTL+F  GSEN+TSKPE+S TDRYSSS+FIFP T  PGE GLMYLP R G+SGTPAVKA K SS
Subject   6709  PSWQVAGKASHCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTLNVEPRTSQGNLKSELCATARSTASFPKQMRTPSTSSSNGDPITTASTLSL*TSKPKDWRYLQVLAPNLQVLVFMKCASLGTLMFW*GSENSTSKPEISETDRYSSSIFIFPCTTHPGE*GLMYLPVRFGLSGTPAVKATKDSS  7272

Range 3: 7533 to 7853 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
173.8 bits(373) 0.0 83/107(78%) 0/107(0%) Plus/Minus
Query        1  ALASSKDFSLASKASFDSPGNLPGGLAI*QC*Q**SISSPIWLTPKAFKPPSTSLTVEASASLGPQFSINIDSPVALMRQP*LSPLLLSTCARIRVAIAAPTRTRIP  321
                ALA+SK  SLAS ASFDSPGN P  LAI*   Q *SISS  WLTPKAF+PP+TSLTV A ASLGPQFSI+IDSPVALM+QP*  PLLLSTCARI +AIA PTRTRIP
Subject   7533  ALANSKALSLASYASFDSPGNFPI*LAI*LFQQL*SISSTFWLTPKAFRPPNTSLTVAARASLGPQFSISIDSPVALMKQP*WLPLLLSTCARIWMAIATPTRTRIP  7853

Range 4: 7297 to 7491 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.9 bits(168) 0.0 35/65(54%) 0/65(0%) Plus/Minus
Query      363  LLKAQNSQTDQKAQSLGMTVWDHNMLCFWCRPYNALHVEIDVCCPLSMANLTFLGNAAPSQCPSQ  557
                +LK +N  TDQ + +LGMT  DHN L   CRP NA  VE   CC L+MANLTF  +  P QCP Q
Subject   7297  VLKVRNFLTDQISLNLGMTA*DHNRLYSLCRPCNAPRVETGECCHLNMANLTFSRSVEPIQCPGQ  7491

Range 5: 6707 to 7657 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
386.9 bits(838) 0.0 180/317(57%) 0/317(0%) Plus/Minus
Query      197  NSQLILTPL*PL*DNHDYHHYCCRHVXXXXXXXXXXXEPEFQTDSTYMEAVNTITIIKGTKFSD*PKSPELGNDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMPKPIVNGVIVLAQFAGC*KGISLHDDQFLPMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSYLTRKFEIGIMRSR*INCLLAKAN*HTLNIQLKWRTCNHFIRPVTMQIKTKGQKVLTCIFTKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYLPFYSTTRRVWLDVPPREVGSVGNAGRKGYETLVL  1147
                N Q +LTP   L*++ D +HYCC HVQG G QLQ L  PEFQ D+  M+A    T IKGTKFSD*P  PELGNDCLGPQ V+L VPSL* PPCGN  MLSPEYGKFDFL+KC T PMP+P+VNGV+VLAQ AGC KGISLH   F  M CC NVEP+L+    +P  Q* NN+KC T +L  + E+ I+R+ *I  LL+KAN ++LNIQ KWR  N+ +  +TM I+ K  +VL  + TK A   LYEV LPWN D+L+ V + H+KTRN+  RQ+LIKY+YLP + T  RV LDVP  ++ +V     K ++ LVL
Subject   6707  NFQSVLTPRWLL*NSLDGYHYCCLHVQGFGWQLQLLLGPEFQRDNACMKATRVTTSIKGTKFSD*PNIPELGNDCLGPQ*VILFVPSL*CPPCGNW*MLSPEYGKFDFLKKCRTNPMPRPMVNGVMVLAQLAGCWKGISLHYY*FASMPCCCNVEPMLVF*SWVPRLQ*RNNVKC*TPHLAGQLEVRIVRNC*IYSLLSKANENSLNIQFKWRPYNNCVHSITMNIEAKRLEVLAGVSTKPASFGLYEVCLPWNADVLVGV*EQHIKTRNIRDRQVLIKYIYLPLHYTPWRVGLDVPSCKIWTVWYTRCKSHKRLVL  7657

Range 6: 7706 to 7852 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.2 bits(112) 0.0 25/49(51%) 0/49(0%) Plus/Minus
Query        2  PLPAPKISVWPQKLHLTHLATFLVGSPYDNVNNDNQFLHQYG*PLKPSN  148
                PL   K  VW   LHLT  ATF    P+++ NN NQF   +G*PLKPS+
Subject   7706  PLLTLKP*VWLHMLHLTRQATFQFDLPFNSFNNCNQFHQLFG*PLKPSD  7852

Range 7: 7516 to 7851 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
199.5 bits(429) 0.0 88/112(79%) 0/112(0%) Minus/Plus
Query        3  YMYYLFGILVLVGAAIATLILAHVDSNNGDNHGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HCHMASPPGRLPGESNEAFEARLKSLELAR  338
                YM+YLFGILVLVG AIA  ILAHVDS++G++ GC IRATGESILIENCGPSEALA+TVKEVLGGLKALGVS   +EIDY C*   MAS  G+LPGESNEA+EARLK+LELAR
Subject   7516  YMHYLFGILVLVGVAIAIQILAHVDSSSGNHQGCFIRATGESILIENCGPSEALAATVKEVLGGLKALGVSQKVDEIDYSC*KS*MASQIGKLPGESNEAYEARLKALELAR  7851

Range 8: 7006 to 7458 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
157.8 bits(338) 0.0 78/151(52%) 0/151(0%) Minus/Plus
Query      396  SDYRFAI*VGC*GCANLLWQGGS*FSGCA*FRFQTSL*GTRCYI*CCYLIEIKGSDLR**ALVLHCCNKT*EEIDHHAVKCLFSNLRIGPKLSPR*RLAWALAWCCIS*ESQICHTQGTTYINFHMEGVIGTAPKA*HIVVPNSHSQALGF  848
                S YR AI* GC*G ++LLW+GG   S CA F  Q +L G    I* CY+IE+ G + R  ALVL C NK  ++ +++AV+CL SNL  G +    * LAWAL W   S*ESQICH Q TT+ +FH  G+ GTA + * IVV  SHSQ  G+
Subject   7006  SCYRVAI*TGC*GSSHLLWKGGCRSSSCAQF*LQVALRGAGFNI*RCYVIEV*GPNFRRQALVLRCSNKASKQTNNNAVRCLSSNLPTGLRP*LH*PLAWALDWFYTS*ESQICHIQVTTFTSFHTGGITGTAQRV*PIVVLGSHSQVQGY  7458

Range 9: 6709 to 6975 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.0 bits(214) 0.0 43/89(48%) 0/89(0%) Minus/Plus
Query      879  GREFHSLYGRRSRHSQPLWEVHQAILSWLCCKREDKHT**VSVCK*HFWF*RVIF*PISKYQCSKGGSLHKVKDLQIW*KYM*VPSVLW  1145
                GR F   Y   +R S+   +VHQA+LS +C  REDK+T**V VC *+FWF*  +  P+ ++Q SKGG+LHK ++LQ+W  ++ VP + W
Subject   6709  GRVFCGFYSGCTRQSKSYRKVHQALLSRVCSAREDKYT**VPVCL*YFWF*CAVLRPLPEHQRSKGGTLHKDQNLQVWC*HLQVPPIFW  6975

Range 10: 7119 to 7853 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
323.2 bits(699) 0.0 169/245(69%) 0/245(0%) Minus/Plus
Query        1  RYEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIGRN*SSCSEMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPKQSFPSSGLFGQSENFVPLIIVIVLTASIYVLSVWNSGSXXXXXXXXXXXXXRQQ*W**SWLSHKGYRGVNIN*ELWPK*GACFNS*GSAGRFEGFRG*PYW*RN*LSLLTLSYGEPTRKVAR*VK*SF*GQTEIFGAGKG  735
                R  V HL LL Y*+ G +    S GSTL QQ I  N*  CSEMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGG YRDGTKSITYCGP+QSFPSSG+FGQSENFVPLI+V+ L A I+ LS+WNSG  R CNC+PNPCTCRQQ*W* S L HK +RGVN +*+L  K G    S*   G  EGFRG*P  * N*L LL    G+   KVA  VK*S * QT  F   KG
Subject   7119  RCGVQHLTLLRY*SLGTQLQKTSIGSTLQQQGIEAN***CSEMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGHYRDGTKSITYCGPRQSFPSSGIFGQSENFVPLILVVTLVAFIHALSLWNSGPSRSCNCHPNPCTCRQQ*W*PSRLFHKSHRGVNTD*KLRTKRGPSCYS*RGVGWSEGFRG*PKS**N*LQLLKELNGKSNWKVAWRVK*SI*SQT*GFRVSKG  7853

Range 11: 6708 to 7058 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.4 bits(167) 0.0 53/117(45%) 0/117(0%) Minus/Plus
Query      796  RTRVS*PLRPAFPTLPTSLGGTSSHTLLVVL*KGR*TYLMSICL*VTFLVLTCYFLTHIKISVFQGRLTS*SQRPADLVKIHVSTFCPLVLICIVTGLMK*LQVRHLSWMLRVC*FA  1146
                RT +   L+  + T+     GTSS TL  V  KGR* YLMS CL + FLVL C   T  + S FQGR TS*  + A LV    ST   L  + IV    + L  RHL+WMLR   FA
Subject   6708  RTSLLWLLQRVYQTVQILQEGTSSPTLQGV*CKGR*IYLMSTCLSLIFLVLMCCSQTPTRTSAFQGRHTS*RPKLAGLVLTPASTSNLLASMFIVIEWTQLL*GRHLNWMLREFSFA  7058

Range 12: 6768 to 7271 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
141.3 bits(302) 0.0 79/168(47%) 0/168(0%) Plus/Minus
Query      583  PIRRLLKRHFTA**SISSYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLVPHKEV*NRNYAQPLNQLPPCQSKLAHPQHPTQMANL*SLHQTCHYAN*NQRTEGTYMYFHQICRSLTL*SEPPLEH*YFDMGQKITRQNQKCHLQTDTHQVCLSSLLQHNQESMA*CT  1086
                P+ RLL+RH TA   +    LL Q RT+A   +  P  SI *Q  M +  P +  *++N AQ L+  PP QSK   PQHP QMA L* L    HY + +Q+  GT    HQ C+  +L*S PPLE *    G +   QNQK   QT THQV LSSL  H  ES A*CT
Subject   6768  PVGRLLERHLTALLLVCFDALLLQRRTNACLLKLGP*TSIT*QR*MLNPAPRRAT*SQNCAQLLDLQPPFQSK*ELPQHPVQMATL*QLRPLYHYEHRSQKIGGTCRC*HQTCKFWSL*SVPPLER*CSGRGLRTAHQNQKYQRQTGTHQVYLSSLALHTLESRA*CT  7271

Range 13: 7516 to 7851 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
125.2 bits(267) 0.0 57/112(51%) 0/112(0%) Plus/Minus
Query        3  PCQLQRFQSGLKSFI*LTWQPSWWARHMTMLTMIINFFTNMANP*SLQTSQHFLNC*SKRLTWATILN*Y*LPCSPYETTMIITIIAVDMCKD*GCNCSAYKNQNSKQIVHI  338
                PC L   +SG   FI*L  Q S    H+T+ T +INF   +ANP*SLQT+QH  NC S  L W+ I N Y*LP   YET +++T  AV MCKD   NC++Y +QNSK+I+H+
Subject   7516  PC*L*SLKSGFICFI*LARQLSNLTCHLTLSTTVINFINFLANP*SLQTTQHLFNCSS*GLAWSAIFNQY*LPGGSYETALMVTTTAVYMCKDLDGNCNSY*DQNSKEIMHV  7851

Range 14: 7323 to 7481 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.8 bits(133) 0.0 30/53(57%) 0/53(0%) Plus/Minus
Query      373  HKILRLTKKPRAWE*LFGTTICYAFGAVPITPSMWKLMYVVP*VWQI*LS*EM  531
                ++I  LTK P  WE*L  TTI Y   AVP+ P +WKL+ VV *+WQI*LS E+
Subject   7323  YEIF*LTKYP*TWE*LPRTTIGYTLCAVPVMPPVWKLVNVVT*IWQI*LSQEV  7481

Grapevine rupestris stem pitting associated virus isolate CS BR, complete genome

Sequence ID: KX958435.1 Length: 8743 Number of Matches: 14

Range 1: 6707 to 7852 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
604.1 bits(1312) 0.0 262/382(69%) 0/382(0%) Minus/Plus
Query        2  EDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPVDDWLGHWLGAAFPKKVKFAILRGQHTSISTWRAL*GRHQKHNILWSQTVIPKLWAFWSV*EFCAFNNCNSINGLHICTICLEFWFL*ALQLQP*SLHMSTAIMVIIMVVS*GLQGSQY*LRIVAQVRRLLQQLRKCWEV*RL*GLAXXXXXXXXXXXXXIWRAHQEGCQVSQMKLLRPD*NLWSWQG  1147
                EDESF+AFTAGVPD+PNL+GRYIKPYSPGCAV+G+INILDEYLSVSDISGFDVLFSDPYQNI++PREAHFIK+KTCRFG NTCKYL SFGF+++SDR D V+ GSPFELDVEGVLICFGKEAVDLA AHNSDFKLPCEVRG+TF+VVTLLKSRDPTS+DKHWFY+AATRHR KLIIMQ*+AF ATC+LG +++ ++ WLGHW+G+   +KV+FAI R Q++ +ST RAL GRH+++N+LWS  VIPK    WSV +F AF+        H C I LEFW  * LQL   SLHM TA++V I  VS*   GSQY*L+IV Q R  L QL++CW V*RL*GLA  + KLI +V  V WR   E C  SQMK ++PD  L S QG
Subject   6707  EDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGRINILDEYLSVSDISGFDVLFSDPYQNINIPREAHFIKTKTCRFGANTCKYLQSFGFDIYSDRVDAVVVGSPFELDVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFNVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*DAFPATCQLG*DHNSINHWLGHWIGSTLLEKVEFAIFR*QYSPVSTRRALQGRHKEYNLLWS*AVIPKFRDIWSVRKFRAFDTGCDSGRFHTCIIFLEFWS**ELQLPSKSLHM*TAVVVTIKAVS*EPPGSQY*LKIVGQARP*LLQLKRCWVV*RL*GLAKKLMKLITVVERVKWRVKLESCLASQMKHMKPDLRL*S*QG  7852

Range 2: 6709 to 7272 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
297.1 bits(642) 0.0 135/188(72%) 0/188(0%) Plus/Minus
Query      582  PNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLIF*YGSENNTSKPEMSLTDRYSSSMFIFPFTAQPGEYGLMYLPERLGVSGTPAVKAMKLSS  1145
                P+ QVA KA HC++I+   CLVAA *NQCLSSEVGSLDFN VTT NV PRTSQG+LKSELCA A+STAS PKQI TPSTS+S G+P  T+S LSL   KPKD RYL V +PNLQV  FMK ASLG L+F  GSEN+TSKPEMS TD+YSSS+FI P TA PGE GLMYLP R G+SGTPAVKA K SS
Subject   6709  PSWQVAGKASHCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTLNVEPRTSQGNLKSELCATARSTASFPKQIRTPSTSSSKGDPTTTASTLSL*ISKPKDWRYLQVLAPNLQVLVFMKCASLGMLMFW*GSENSTSKPEMSETDKYSSSIFILPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSS  7272

Range 3: 7533 to 7853 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
171.1 bits(367) 0.0 82/107(77%) 0/107(0%) Plus/Minus
Query        1  ALASSKDFSLASKASFDSPGNLPGGLAI*QC*Q**SISSPIWLTPKAFKPPSTSLTVEASASLGPQFSINIDSPVALMRQP*LSPLLLSTCARIRVAIAAPTRTRIP  321
                ALA+SK  SLAS ASFDSPGN P  LAI*   Q *SISS  WLTPKAF+PP+TSLTV A ASLGPQFSI+IDSPVALM+QP*  PLLLSTCARI +AIA PT TRIP
Subject   7533  ALANSKALSLASYASFDSPGNFPI*LAI*LFQQL*SISSTFWLTPKAFRPPNTSLTVAARASLGPQFSISIDSPVALMKQP*WLPLLLSTCARIWMAIATPTMTRIP  7853

Range 4: 7297 to 7485 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.7 bits(161) 0.0 35/63(56%) 0/63(0%) Plus/Minus
Query      369  KAQNSQTDQKAQSLGMTVWDHNMLCFWCRPYNALHVEIDVCCPLSMANLTFLGNAAPSQCPSQ  557
                KA+N  TDQ + +LGMT  DHN L   CRP NAL VE    C L+MAN TF  +  P QCPSQ
Subject   7297  KARNFLTDQISLNLGMTA*DHNRLYSLCRPCNALRVETGEYCHLNMANSTFSRSVEPIQCPSQ  7485

Range 5: 6707 to 7660 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
384.1 bits(832) 0.0 183/318(58%) 0/318(0%) Plus/Minus
Query      194  HNSQLILTPL*PL*DNHDYHHYCCRHVXXXXXXXXXXXEPEFQTDSTYMEAVNTITIIKGTKFSD*PKSPELGNDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMPKPIVNGVIVLAQFAGC*KGISLHDDQFLPMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSYLTRKFEIGIMRSR*INCLLAKAN*HTLNIQLKWRTCNHFIRPVTMQIKTKGQKVLTCIFTKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYLPFYSTTRRVWLDVPPREVGSVGNAGRKGYETLVL  1147
                HN Q +LTP   L*++ D +HYCC HVQG G QLQ L  PEFQ D+  M+A    T IKGTKFSD*P  PELGNDCLGPQ V+L VPSL* PPCGN  +LSPEYGKFDFL+KC T PMPKP+VNGV+VLAQ AGC KGISLH  QF  M CC +VEP+LI    +P  Q* +N+KC T +L  + E+GI+R+ *I  LL+KAN ++LNIQ K R  NH +  +T+ I+ K  +VL  + TK A   LYEV LPWN D+L+ V + HVKTRNV  RQILIKY+Y P + T  RV LDVP   + +V +   K ++ LVL
Subject   6707  HNFQSVLTPRWLL*NSLDGYHYCCLHVQGFGWQLQLLL*PEFQKDNACMKATRVTTSIKGTKFSD*PNIPELGNDCLGPQ*VILFVPSL*CPPCGNW*ILSPEYGKFDFLKKCRTNPMPKPMVNGVMVLAQLAGCWKGISLHYYQFASMPCCCDVEPMLIF*SWVPRLQ*RHNVKC*TPHLAGQLEVGIVRNC*IYGLLSKANKNSLNIQFKRRPHNHCVHSITINIEAKRLEVLAGVSTKPASFSLYEVCLPWNVDVLVGV*EQHVKTRNVRDRQILIKYIYPPLHCTPWRVGLDVPSC*IWTVWHTRCKSHKRLVL  7660

Range 6: 7706 to 7852 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.0 bits(118) 0.0 26/49(53%) 0/49(0%) Plus/Minus
Query        2  PLPAPKISVWPQKLHLTHLATFLVGSPYDNVNNDNQFLHQYG*PLKPSN  148
                PL   K  VW   LHLT  ATF   SP+++ NN NQF   +G*PLKPS+
Subject   7706  PLLTLKP*VWLHMLHLTRQATFQFDSPFNSFNNCNQFHQLFG*PLKPSD  7852

Range 7: 7516 to 7851 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
198.6 bits(427) 0.0 87/112(78%) 0/112(0%) Minus/Plus
Query        3  YMYYLFGILVLVGAAIATLILAHVDSNNGDNHGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HCHMASPPGRLPGESNEAFEARLKSLELAR  338
                YM+YLFGILV+VG AIA  ILAHVDS++G++ GC IRATGESILIENCGPSEALA+TVKEVLGGLKALGVS   +EIDY C*   MAS  G+LPGESNEA+EARLK+LELAR
Subject   7516  YMHYLFGILVIVGVAIAIQILAHVDSSSGNHQGCFIRATGESILIENCGPSEALAATVKEVLGGLKALGVSQKVDEIDYSC*KS*MASQIGKLPGESNEAYEARLKALELAR  7851

Range 8: 7021 to 7458 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
146.3 bits(313) 0.0 74/146(51%) 0/146(0%) Minus/Plus
Query      396  AI*VGC*GCANLLWQGGS*FSGCA*FRFQTSL*GTRCYI*CCYLIEIKGSDLR**ALVLHCCNKT*EEIDHHAVKCLFSNLRIGPKLSPR*RLAWALAWCCIS*ESQICHTQGTTYINFHMEGVIGTAPKA*HIVVPNSHSQALGF  833
                A * GC*G + LLW+GG   S CA FR Q +L G    I* C +IE+ G + R *ALVL   NK  ++ D++AV+CL SNL  G +    * LAWAL W   S*ES+ICH Q T + +FH EG+ GTA + * IVV  SHSQ  G+
Subject   7021  AF*TGC*GSSYLLWKGGRRSSSCAQFRLQVALRGAGFNI*RCDVIEV*GPNFRR*ALVLRRSNKASKQTDNNAVRCLSSNLPTGLRP*LH*PLAWALDWFYTS*ESRICHIQVTIFTSFHTEGITGTAQRV*PIVVLGSHSQVQGY  7458

Range 9: 6709 to 6975 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
103.7 bits(220) 0.0 45/89(51%) 0/89(0%) Minus/Plus
Query      879  GREFHSLYGRRSRHSQPLWEVHQAILSWLCCKREDKHT**VSVCK*HFWF*RVIF*PISKYQCSKGGSLHKVKDLQIW*KYM*VPSVLW  1145
                GR F   Y   +R S+   +VHQA+LS +C  REDK+T**V VC *HFWF*R +  P+ ++Q SKGG+LHK  +LQ+W  ++ VP + W
Subject   6709  GRVFCGFYSGCARQSKSNRKVHQALLSRVCSAREDKYT**VFVCL*HFWF*RAVLRPLPEHQHSKGGTLHKD*NLQVWC*HLQVPPIFW  6975

Range 10: 7119 to 7853 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
326.4 bits(706) 0.0 170/245(69%) 0/245(0%) Minus/Plus
Query        1  RYEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIGRN*SSCSEMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPKQSFPSSGLFGQSENFVPLIIVIVLTASIYVLSVWNSGSXXXXXXXXXXXXXRQQ*W**SWLSHKGYRGVNIN*ELWPK*GACFNS*GSAGRFEGFRG*PYW*RN*LSLLTLSYGEPTRKVAR*VK*SF*GQTEIFGAGKG  735
                R  V HL L  Y*+ G +   IS GST  QQ I  N*  CSEMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGG YRDGTKSITYCGP+QSFPSSG+FGQSENFVPLI+V+ L A I+ LS WNSG  R CNC+PNPCTCRQQ*W* S L HK +RGVN +*+LW K G    S*   G  EGFRG*P  * N*L LL    GE   KVA  VK*S * QT  F   KG
Subject   7119  RCGVQHLTL*RY*SLGTQLQKISIGSTSQQQGIEAN***CSEMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGHYRDGTKSITYCGPRQSFPSSGIFGQSENFVPLILVVTLVAFIHALSFWNSGHSRSCNCHPNPCTCRQQ*W*PSRLFHKSHRGVNTD*KLWAKRGPSCYS*RGVGWSEGFRG*PKS**N*LQLLKELNGESNWKVAWRVK*SI*SQT*GFRVSKG  7853

Range 11: 6768 to 7058 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.9 bits(168) 0.0 51/97(53%) 0/97(0%) Minus/Plus
Query      796  GTSSHTLLVVL*KGR*TYLMSICL*VTFLVLTCYFLTHIKISVFQGRLTS*SQRPADLVKIHVSTFCPLVLICIVTGLMK*LQVRHLSWMLRVC*FA  1086
                GTSS TL  V  KG * YLMSICL +TFLVLTC   T  + S FQGR TS*  + A LV    ST   L  I IV    + L  R L+WMLR   FA
Subject   6768  GTSSPTLQGVQCKGG*IYLMSICLSLTFLVLTCCSQTPTRTSTFQGRHTS*RLKLAGLVLTPASTSNLLASIFIVIEWTQWLWGRLLNWMLREFLFA  7058

Range 12: 6747 to 7271 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
142.7 bits(305) 0.0 80/175(46%) 0/175(0%) Plus/Minus
Query      583  PIRRLLKRHFTA**SISSYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLVPHKEV*NRNYAQPLNQLPPCQSKLAHPQHPTQMANL*SLHQTCHYAN*NQRTEGTYMYFHQICRSLTL*SEPPLEH*YFDMGQKITRQNQKCHLQTDTHQVCLSSLLQHNQESMA*CTSQRGWEC  1107
                P+ RLL+RH TA  S+    LL + RT+AY  +  P  SI  Q  M +  P +  *+RN AQ L+  PP QSK   PQHP Q A    L    HY   +Q+  GT    HQ C+  +L*S PPLE *    G +  RQNQKC  QT+THQV LSSL  H  ES A*CT     +C
Subject   6747  PVGRLLERHLTALLSVCFDALLLRRRTNAYLLKLGP*TSITSQR*MLNPAPRRAT*SRNCAQLLDLRPPFQSK*ELPQHPVQKATPQPLRPLYHYKYRSQKIGGTCRC*HQTCKF*SL*SVPPLEC*CSGRGLRTARQNQKCQRQTNTHQVYLSSLALHTLESRA*CTFLLDLDC  7271

Range 13: 7516 to 7851 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
130.7 bits(279) 0.0 59/112(53%) 0/112(0%) Plus/Minus
Query        3  PCQLQRFQSGLKSFI*LTWQPSWWARHMTMLTMIINFFTNMANP*SLQTSQHFLNC*SKRLTWATILN*Y*LPCSPYETTMIITIIAVDMCKD*GCNCSAYKNQNSKQIVHI  338
                PC L   +SG   FI*L  Q S   RH+T+ T +INF   +ANP*SLQT+QH  NC S  L W TI N Y*LP   YET +++T  AV MCKD   NC++Y +QNSK+I+H+
Subject   7516  PC*L*SLKSGFICFI*LARQLSNLTRHLTLSTTVINFINFLANP*SLQTTQHLFNCSS*GLAWPTIFNQY*LPGGSYETALMVTTTAVYMCKDLDGNCNSYYDQNSKKIMHV  7851

Range 14: 7323 to 7481 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
66.1 bits(138) 0.0 30/53(57%) 0/53(0%) Plus/Minus
Query      373  HKILRLTKKPRAWE*LFGTTICYAFGAVPITPSMWKLMYVVP*VWQI*LS*EM  531
                H+I  LTK P  WE*L  TTI Y   AVP+ PS+WKL+ +V *+WQI LS E+
Subject   7323  HEIF*LTKYP*TWE*LPRTTIGYTLCAVPVMPSVWKLVNIVT*IWQIRLSQEV  7481

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OB1

Sequence ID: AB277783.1 Length: 2876 Number of Matches: 10

Range 1: 964 to 2103 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
898.7 bits(1955) 0.0 377/380(99%) 0/380(0%) Plus/Minus
Query        6  CQLQRFQSGLKSFI*LTWQPSWWARHMTMLTMIINFFTNMANP*SLQTSQHFLNC*SKRLTWATILN*Y*LPCSPYETTMIITIIAVDMCKD*GCNCSAYKNQNSKQIVHIWRPLILLQLLKAQNSQTDQKAQSLGMTVWDHNMLCFWCRPYNALHVEIDVCCPLSMANLTFLGNAAPSQCPSQSSTG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLIF*YGSENNTSKPEMSLTDRYSSSMFIFPFTAQPGEYGLMYLPERLGVSGTPAVKAMKLSS  1145
                CQLQRFQSGLKSFI*LTWQPSWWARHMTMLTMIINFFTNMANP*SLQTSQHFLNC*SKRLTWATILN*Y*LPCSPYETTMIITIIAVDMCKD*GCNCSAYKNQNSKQIVHIWRPLILLQLLKAQNSQTDQKAQSLGMTVWDHNMLCFWCRPYNALHVEIDVCCPLSMANLTFLGN A SQCPSQSS G**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLIF*YGSENNTSKPEMSLTDRYSSSMFIFPFTAQPGEYGLMYLPERLGVSGTPAVKAMKLSS
Subject    964  CQLQRFQSGLKSFI*LTWQPSWWARHMTMLTMIINFFTNMANP*SLQTSQHFLNC*SKRLTWATILN*Y*LPCSPYETTMIITIIAVDMCKD*GCNCSAYKNQNSKQIVHIWRPLILLQLLKAQNSQTDQKAQSLGMTVWDHNMLCFWCRPYNALHVEIDVCCPLSMANLTFLGNEALSQCPSQSSMG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLIF*YGSENNTSKPEMSLTDRYSSSMFIFPFTAQPGEYGLMYLPERLGVSGTPAVKAMKLSS  2103

Range 2: 962 to 2104 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
879.5 bits(1913) 0.0 378/381(99%) 0/381(0%) Minus/Plus
Query        5  EDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPVDDWLGHWLGAAFPKKVKFAILRGQHTSISTWRAL*GRHQKHNILWSQTVIPKLWAFWSV*EFCAFNNCNSINGLHICTICLEFWFL*ALQLQP*SLHMSTAIMVIIMVVS*GLQGSQY*LRIVAQVRRLLQQLRKCWEV*RL*GLAXXXXXXXXXXXXXIWRAHQEGCQVSQMKLLRPD*NLWSWQ  1147
                EDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHP+DDWLGHWL A+FPKKVKFAILRGQHTSISTWRAL*GRHQKHNILWSQTVIPKLWAFWSV*EFCAFNNCNSINGLHICTICLEFWFL*ALQLQP*SLHMSTAIMVIIMVVS*GLQGSQY*LRIVAQVRRLLQQLRKCWEV*RL*GLAILVKKLIIIVNIVIWRAHQEGCQVSQMKLLRPD*NLWSWQ
Subject    962  EDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPIDDWLGHWLSASFPKKVKFAILRGQHTSISTWRAL*GRHQKHNILWSQTVIPKLWAFWSV*EFCAFNNCNSINGLHICTICLEFWFL*ALQLQP*SLHMSTAIMVIIMVVS*GLQGSQY*LRIVAQVRRLLQQLRKCWEV*RL*GLAILVKKLIIIVNIVIWRAHQEGCQVSQMKLLRPD*NLWSWQ  2104

Range 3: 964 to 1713 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
563.3 bits(1223) 0.0 241/250(96%) 0/250(0%) Minus/Plus
Query      396  GREFHSLYGRRSRHSQPLWEVHQAILSWLCCKREDKHT**VSVCK*HFWF*RVIF*PISKYQCSKGGSLHKVKDLQIW*KYM*VPSVLWF*FA**QV**SDYRFAI*VGC*GCANLLWQGGS*FSGCA*FRFQTSL*GTRCYI*CCYLIEIKGSDLR**ALVLHCCNKT*EEIDHHAVKCLFSNLRIGPKLSPR*RLAWALAWCCIS*ESQICHTQGTTYINFHMEGVIGTAPKA*HIVVPNSHSQALGF  1145
                GREFHSLYGRRSRHSQPLWEVH AILSWLCCK EDKHT**VSVCK*HFWF*RVIF*PISKYQCSKGGSLHKVKDLQIW KYM*VPSVLWF*FA**QV**SDYR AI*VGC*GCA+LLWQGGS*FSGCA*FRFQTSL*GTRCYI*CCYLIEIKGSDLR**ALVLHCCNKT*+EIDHHAVKCLFSNLRIGPKLSP *RLAWALA C IS*ESQICHTQGTTYINFHMEGVIGTAPKA*HIVVPNSHSQALGF
Subject    964  GREFHSLYGRRSRHSQPLWEVH*AILSWLCCKGEDKHT**VSVCK*HFWF*RVIF*PISKYQCSKGGSLHKVKDLQIWRKYM*VPSVLWF*FA**QV**SDYRLAI*VGC*GCADLLWQGGS*FSGCA*FRFQTSL*GTRCYI*CCYLIEIKGSDLR**ALVLHCCNKT*KEIDHHAVKCLFSNLRIGPKLSPH*RLAWALA*CFIS*ESQICHTQGTTYINFHMEGVIGTAPKA*HIVVPNSHSQALGF  1713

Range 4: 1750 to 2106 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
281.0 bits(607) 0.0 118/119(99%) 0/119(0%) Minus/Plus
Query        3  **Y*RPPYMYYLFGILVLVGAAIATLILAHVDSNNGDNHGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HCHMASPPGRLPGESNEAFEARLKSLELAR  359
                **Y*RPPYMYYLFGILVLVGAAIATLILAHVDSNNGDNHGCLIRATGESILIENCGPSEALAST+KEVLGGLKALGVSHIGEEIDYHC*HCHMASPPGRLPGESNEAFEARLKSLELAR
Subject   1750  **Y*RPPYMYYLFGILVLVGAAIATLILAHVDSNNGDNHGCLIRATGESILIENCGPSEALASTIKEVLGGLKALGVSHIGEEIDYHC*HCHMASPPGRLPGESNEAFEARLKSLELAR  2106

Range 5: 962 to 1918 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
718.6 bits(1562) 0.0 312/319(98%) 0/319(0%) Plus/Minus
Query      191  GHNSQLILTPL*PL*DNHDYHHYCCRHVXXXXXXXXXXXEPEFQTDSTYMEAVNTITIIKGTKFSD*PKSPELGNDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMPKPIVNGVIVLAQFAGC*KGISLHDDQFLPMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSYLTRKFEIGIMRSR*INCLLAKAN*HTLNIQLKWRTCNHFIRPVTMQIKTKGQKVLTCIFTKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYLPFYSTTRRVWLDVPPREVGSVGNAGRKGYETLVL  1147
                GHNSQLILTPL*PL*DNHDYHHYCCRHVQGLGLQLQRLQEPEFQTDSTYMEAVNTITIIKGTKFSD*PKSPELGNDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRK STKPMPKPIVNGVIVLAQFAGC*KGISLHDDQFL MSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSYLTRKFEIGIMRSR*INCLLAKAN HTLNIQLKWR CNHFIRPVTMQIKTKGQKVLTCIF KSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYLP YSTTRRVWL+VPPREVGSVGNAGRKGYETLVL
Subject    962  GHNSQLILTPL*PL*DNHDYHHYCCRHVQGLGLQLQRLQEPEFQTDSTYMEAVNTITIIKGTKFSD*PKSPELGNDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRK*STKPMPKPIVNGVIVLAQFAGC*KGISLHDDQFLSMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSYLTRKFEIGIMRSR*INCLLAKANQHTLNIQLKWRACNHFIRPVTMQIKTKGQKVLTCIFAKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYLPLYSTTRRVWLNVPPREVGSVGNAGRKGYETLVL  1918

Range 6: 1961 to 2104 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.0 bits(262) 0.0 48/48(100%) 0/48(0%) Plus/Minus
Query        5  LPAPKISVWPQKLHLTHLATFLVGSPYDNVNNDNQFLHQYG*PLKPSN  148
                LPAPKISVWPQKLHLTHLATFLVGSPYDNVNNDNQFLHQYG*PLKPSN
Subject   1961  LPAPKISVWPQKLHLTHLATFLVGSPYDNVNNDNQFLHQYG*PLKPSN  2104

Range 7: 1359 to 2105 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
539.9 bits(1172) 0.0 246/249(99%) 0/249(0%) Minus/Plus
Query        4  SNFLVRYEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIGRN*SSCSEMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPKQSFPSSGLFGQSENFVPLIIVIVLTASIYVLSVWNSGSXXXXXXXXXXXXXRQQ*W**SWLSHKGYRGVNIN*ELWPK*GACFNS*GSAGRFEGFRG*PYW*RN*LSLLTLSYGEPTRKVAR*VK*SF*GQTEIFGAGK  750
                SNFLVRYEVLHLMLLPY*NQGIRPPMISTGSTLLQQDI RN*SSCSEMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPKQSFPSSGLFGQSENFVPLIIVIVLTASIYVLSVWNSGSCRRCNCNPNPCTCRQQ*W**SWLSHKGYRGVNIN*ELWPK*GACFN+*GS GRFEGFRG*PYW*RN*LSLLTLSYGEPTRKVAR*VK*SF*GQTEIFGAGK
Subject   1359  SNFLVRYEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIERN*SSCSEMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPKQSFPSSGLFGQSENFVPLIIVIVLTASIYVLSVWNSGSCRRCNCNPNPCTCRQQ*W**SWLSHKGYRGVNIN*ELWPK*GACFNN*GSVGRFEGFRG*PYW*RN*LSLLTLSYGEPTRKVAR*VK*SF*GQTEIFGAGK  2105

Range 8: 963 to 1313 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
257.7 bits(556) 0.0 113/117(97%) 0/117(0%) Minus/Plus
Query      796  RTRVS*PLRPAFPTLPTSLGGTSSHTLLVVL*KGR*TYLMSICL*VTFLVLTCYFLTHIKISVFQGRLTS*SQRPADLVKIHVSTFCPLVLICIVTGLMK*LQVRHLSWMLRVC*FA  1146
                RTRVS*PLRPAFPTLPTSLGGT SHTLLVVL*+GR*TYLMSICL*VTFLVLTCYFLTHIKISVFQGRLTS*SQRPADL KIHVSTFCPLVLICIVTGLMK*LQ RHLSWMLRVC*FA
Subject    963  RTRVS*PLRPAFPTLPTSLGGTLSHTLLVVL*RGR*TYLMSICL*VTFLVLTCYFLTHIKISVFQGRLTS*SQRPADLAKIHVSTFCPLVLICIVTGLMK*LQARHLSWMLRVC*FA  1313

Range 9: 1002 to 1736 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
544.0 bits(1181) 0.0 237/245(97%) 0/245(0%) Plus/Minus
Query      373  HKILRLTKKPRAWE*LFGTTICYAFGAVPITPSMWKLMYVVP*VWQI*LS*EMQHXXXXXXXXXXGDSFGPIRRLLKRHFTA**SISSYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLVPHKEV*NRNYAQPLNQLPPCQSKLAHPQHPTQMANL*SLHQTCHYAN*NQRTEGTYMYFHQICRSLTL*SEPPLEH*YFDMGQKITRQNQKCHLQTDTHQVCLSSLLQHNQESMA*CTSQRGWEC  1107
                HKILRLTKKPRAWE*LFGTTICYAFGAVPITPSMWKLMYVVP*VWQI*LS*EM+H ANAQANRQ GDSFGPIRRLLKRHFTA**SIS YVLLQQCRTSAYHRRSDPLISIR*QHQM*HLVPHKEV*NRNYAQPLNQLPPCQSK AHPQHPTQMA+L*SLHQTCHYAN*NQRTEGTYMYF QICRSLTL*SEPPLEH*YFDMGQKITRQNQKCHLQTDTHQVCLSS LQHNQESMA*CTSQRGWEC
Subject   1002  HKILRLTKKPRAWE*LFGTTICYAFGAVPITPSMWKLMYVVP*VWQI*LS*EMKH*ANAQANRQWGDSFGPIRRLLKRHFTA**SISFYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLVPHKEV*NRNYAQPLNQLPPCQSKSAHPQHPTQMASL*SLHQTCHYAN*NQRTEGTYMYFRQICRSLTL*SEPPLEH*YFDMGQKITRQNQKCHLQTDTHQVCLSSPLQHNQESMA*CTSQRGWEC  1736

Range 10: 1788 to 2108 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
233.8 bits(504) 0.0 105/107(98%) 0/107(0%) Plus/Minus
Query        1  ALASSKDFSLASKASFDSPGNLPGGLAI*QC*Q**SISSPIWLTPKAFKPPSTSLTVEASASLGPQFSINIDSPVALMRQP*LSPLLLSTCARIRVAIAAPTRTRIP  321
                ALASSKDFSLASKASFDSPGNLPGGLAI*QC*Q**SISSPIWLTPKAFKPP+TSL VEASASLGPQFSINIDSPVALMRQP*LSPLLLSTCARIRVAIAAPTRTRIP
Subject   1788  ALASSKDFSLASKASFDSPGNLPGGLAI*QC*Q**SISSPIWLTPKAFKPPNTSLIVEASASLGPQFSINIDSPVALMRQP*LSPLLLSTCARIRVAIAAPTRTRIP  2108

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 10

Range 1: 6708 to 7847 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
892.7 bits(1942) 0.0 373/380(98%) 0/380(0%) Plus/Minus
Query        6  CQLQRFQSGLKSFI*LTWQPSWWARHMTMLTMIINFFTNMANP*SLQTSQHFLNC*SKRLTWATILN*Y*LPCSPYETTMIITIIAVDMCKD*GCNCSAYKNQNSKQIVHIWRPLILLQLLKAQNSQTDQKAQSLGMTVWDHNMLCFWCRPYNALHVEIDVCCPLSMANLTFLGNAAPSQCPSQSSTG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLIF*YGSENNTSKPEMSLTDRYSSSMFIFPFTAQPGEYGLMYLPERLGVSGTPAVKAMKLSS  1145
                CQLQRFQSGLKSFI*LTWQPSWWARHMTMLTMIINFFTNMANP*SLQTSQHFLNC*SKRLTWATILN*Y*LPCSPYETTMIITIIAVDMCKD*GCNCSAYKNQNSKQIVHIW PLILLQLLKAQNSQTDQ+AQSLGMTVWDHNMLCFWC PYNALHVEIDVCCPL+MANLTFL NAAPSQCP QSSTG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLIF*YGSENNTSKPEMSLTDRYSSSMFIFPFTAQPGEYGLMYLPERLGVSGTPAVKAMK SS
Subject   6708  CQLQRFQSGLKSFI*LTWQPSWWARHMTMLTMIINFFTNMANP*SLQTSQHFLNC*SKRLTWATILN*Y*LPCSPYETTMIITIIAVDMCKD*GCNCSAYKNQNSKQIVHIWMPLILLQLLKAQNSQTDQRAQSLGMTVWDHNMLCFWCHPYNALHVEIDVCCPLNMANLTFLENAAPSQCPRQSSTG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLIF*YGSENNTSKPEMSLTDRYSSSMFIFPFTAQPGEYGLMYLPERLGVSGTPAVKAMKFSS  7847

Range 2: 6706 to 7848 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
867.1 bits(1886) 0.0 374/381(98%) 0/381(0%) Minus/Plus
Query        5  EDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPVDDWLGHWLGAAFPKKVKFAILRGQHTSISTWRAL*GRHQKHNILWSQTVIPKLWAFWSV*EFCAFNNCNSINGLHICTICLEFWFL*ALQLQP*SLHMSTAIMVIIMVVS*GLQGSQY*LRIVAQVRRLLQQLRKCWEV*RL*GLAXXXXXXXXXXXXXIWRAHQEGCQVSQMKLLRPD*NLWSWQ  1147
                EDE+FIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPVDDW GHWLGAAF KKVKFAI RGQHTSISTWRAL*G HQKHNILWSQTVIPKLWA WSV*EFCAFNNCNSING+HICTICLEFWFL*ALQLQP*SLHMSTAIMVIIMVVS*GLQGSQY*LRIVAQVRRLLQQLRKCWEV*RL*GLAILVKKLIIIVNIVIWRAHQEGCQVSQMKLLRPD*NLWSWQ
Subject   6706  EDENFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPVDDWRGHWLGAAFSKKVKFAIFRGQHTSISTWRAL*GWHQKHNILWSQTVIPKLWALWSV*EFCAFNNCNSINGIHICTICLEFWFL*ALQLQP*SLHMSTAIMVIIMVVS*GLQGSQY*LRIVAQVRRLLQQLRKCWEV*RL*GLAILVKKLIIIVNIVIWRAHQEGCQVSQMKLLRPD*NLWSWQ  7848

Range 3: 6708 to 7454 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
567.0 bits(1231) 0.0 240/249(96%) 0/249(0%) Minus/Plus
Query      399  GREFHSLYGRRSRHSQPLWEVHQAILSWLCCKREDKHT**VSVCK*HFWF*RVIF*PISKYQCSKGGSLHKVKDLQIW*KYM*VPSVLWF*FA**QV**SDYRFAI*VGC*GCANLLWQGGS*FSGCA*FRFQTSL*GTRCYI*CCYLIEIKGSDLR**ALVLHCCNKT*EEIDHHAVKCLFSNLRIGPKLSPR*RLAWALAWCCIS*ESQICHTQGTTYINFHMEGVIGTAPKA*HIVVPNSHSQALG  1145
                GREFHSLYGRRS H+QPLWEVHQAILSWLCCKREDKHT**VSVCK*HFWF*RVIF*PISKYQCSKGGSLHKVKDLQIW KYM*VPSVLWF*FA**QV**SDYRFAI*VGC*GCANLLWQGGS*FSGCA*F FQTSL*G RCYI*CCYLIEIKGSDLR**ALVLHCCNKT*+EIDHHAVKCLFSNLRIGPKLSPR*RLAWALAWCCI *ESQICH QGTTYINFHMEGVIG APKA*HIVVPNSHSQALG
Subject   6708  GREFHSLYGRRS*HTQPLWEVHQAILSWLCCKREDKHT**VSVCK*HFWF*RVIF*PISKYQCSKGGSLHKVKDLQIWRKYM*VPSVLWF*FA**QV**SDYRFAI*VGC*GCANLLWQGGS*FSGCA*F*FQTSL*GARCYI*CCYLIEIKGSDLR**ALVLHCCNKT*KEIDHHAVKCLFSNLRIGPKLSPR*RLAWALAWCCIF*ESQICHIQGTTYINFHMEGVIGMAPKA*HIVVPNSHSQALG  7454

Range 4: 7494 to 7850 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
277.4 bits(599) 0.0 118/119(99%) 0/119(0%) Minus/Plus
Query        3  **Y*RPPYMYYLFGILVLVGAAIATLILAHVDSNNGDNHGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HCHMASPPGRLPGESNEAFEARLKSLELAR  359
                **Y*R PYMYYLFGILVLVGAAIATLILAHVDSNNGDNHGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HCHMASPPGRLPGESNEAFEARLKSLELAR
Subject   7494  **Y*RHPYMYYLFGILVLVGAAIATLILAHVDSNNGDNHGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HCHMASPPGRLPGESNEAFEARLKSLELAR  7850

Range 5: 6706 to 7662 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
715.4 bits(1555) 0.0 310/319(97%) 0/319(0%) Plus/Minus
Query      191  GHNSQLILTPL*PL*DNHDYHHYCCRHVXXXXXXXXXXXEPEFQTDSTYMEAVNTITIIKGTKFSD*PKSPELGNDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMPKPIVNGVIVLAQFAGC*KGISLHDDQFLPMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSYLTRKFEIGIMRSR*INCLLAKAN*HTLNIQLKWRTCNHFIRPVTMQIKTKGQKVLTCIFTKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYLPFYSTTRRVWLDVPPREVGSVGNAGRKGYETLVL  1147
                GHNSQLILTPL*PL*DNHDYHHYCCRHVQGLGLQLQRLQEPEFQTDSTYM+AVNTITIIKGTKFSD*PKSPELGNDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMP PIVNGVIVLAQFAGC*KGISLHDDQFL MSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTS+LTRKFEI IMRSR*INCLLAKAN*HTLNIQLKWRTCNHFIRPVTMQIKTKGQKVLTCIF KSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYLPFYSTTRRVWLDVPPREVG V NAGRKGYE LVL
Subject   6706  GHNSQLILTPL*PL*DNHDYHHYCCRHVQGLGLQLQRLQEPEFQTDSTYMDAVNTITIIKGTKFSD*PKSPELGNDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMPTPIVNGVIVLAQFAGC*KGISLHDDQFLSMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSHLTRKFEIRIMRSR*INCLLAKAN*HTLNIQLKWRTCNHFIRPVTMQIKTKGQKVLTCIFAKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYLPFYSTTRRVWLDVPPREVGCVRNAGRKGYEILVL  7662

Range 6: 7705 to 7848 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.0 bits(262) 0.0 48/48(100%) 0/48(0%) Plus/Minus
Query        5  LPAPKISVWPQKLHLTHLATFLVGSPYDNVNNDNQFLHQYG*PLKPSN  148
                LPAPKISVWPQKLHLTHLATFLVGSPYDNVNNDNQFLHQYG*PLKPSN
Subject   7705  LPAPKISVWPQKLHLTHLATFLVGSPYDNVNNDNQFLHQYG*PLKPSN  7848

Range 7: 7103 to 7849 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
537.6 bits(1167) 0.0 246/249(99%) 0/249(0%) Minus/Plus
Query        4  SNFLVRYEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIGRN*SSCSEMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPKQSFPSSGLFGQSENFVPLIIVIVLTASIYVLSVWNSGSXXXXXXXXXXXXXRQQ*W**SWLSHKGYRGVNIN*ELWPK*GACFNS*GSAGRFEGFRG*PYW*RN*LSLLTLSYGEPTRKVAR*VK*SF*GQTEIFGAGK  750
                SNFLVR EVLHLMLLPY*NQGIRPPMISTGSTLLQQDI RN*SSCSEMPFQQPANWAKTITPLTIG+GIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPKQSFPSSGLFGQSENFVPLIIVIVLTASIYVLSVWNSGSCRRCNCNPNPCTCRQQ*W**SWLSHKGYRGVNIN*ELWPK*GACFNS*GSAGRFEGFRG*PYW*RN*LSLLTLSYGEPTRKVAR*VK*SF*GQTEIFGAGK
Subject   7103  SNFLVRCEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIERN*SSCSEMPFQQPANWAKTITPLTIGVGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPKQSFPSSGLFGQSENFVPLIIVIVLTASIYVLSVWNSGSCRRCNCNPNPCTCRQQ*W**SWLSHKGYRGVNIN*ELWPK*GACFNS*GSAGRFEGFRG*PYW*RN*LSLLTLSYGEPTRKVAR*VK*SF*GQTEIFGAGK  7849

Range 8: 6707 to 7057 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
255.4 bits(551) 0.0 113/117(97%) 0/117(0%) Minus/Plus
Query      796  RTRVS*PLRPAFPTLPTSLGGTSSHTLLVVL*KGR*TYLMSICL*VTFLVLTCYFLTHIKISVFQGRLTS*SQRPADLVKIHVSTFCPLVLICIVTGLMK*LQVRHLSWMLRVC*FA  1146
                RTR+S*PLRPAF T PTSLGGTSSHTLLVVL*KGR*TYLMSICL*VTFLVLTCYFLTHIKISVFQGRLTS*SQRPADL KIHVSTFCPLVLICIVTGLMK*LQVRHLSWMLRVC*FA
Subject   6707  RTRIS*PLRPAFLTHPTSLGGTSSHTLLVVL*KGR*TYLMSICL*VTFLVLTCYFLTHIKISVFQGRLTS*SQRPADLAKIHVSTFCPLVLICIVTGLMK*LQVRHLSWMLRVC*FA  7057

Range 9: 6746 to 7480 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
544.0 bits(1181) 0.0 235/245(96%) 0/245(0%) Plus/Minus
Query      373  HKILRLTKKPRAWE*LFGTTICYAFGAVPITPSMWKLMYVVP*VWQI*LS*EMQHXXXXXXXXXXGDSFGPIRRLLKRHFTA**SISSYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLVPHKEV*NRNYAQPLNQLPPCQSKLAHPQHPTQMANL*SLHQTCHYAN*NQRTEGTYMYFHQICRSLTL*SEPPLEH*YFDMGQKITRQNQKCHLQTDTHQVCLSSLLQHNQESMA*CTSQRGWEC  1107
                HKILRLTK+PRAWE*LFGTTICYAFGA+PITPSMWKLMYVVP*+WQI*LS*+MQHQANA ANRQRGDSFGPIRRLLKRHFTA**SIS YVLLQQCRTSAYHRRSDPLISIR*QHQM*HL PHKEV*N+NYAQPLNQLPPCQSKLAHPQHPTQMANL*SLHQTCHYAN*NQRTEGTYMYF QICRSLTL*SEPPLEH*YFDMGQKITRQNQKCHLQTDTHQVCLSSLLQHNQESMA*CTSQRGW C
Subject   6746  HKILRLTKEPRAWE*LFGTTICYAFGAIPITPSMWKLMYVVP*IWQI*LS*KMQHQANAHANRQRGDSFGPIRRLLKRHFTA**SISFYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLAPHKEV*NQNYAQPLNQLPPCQSKLAHPQHPTQMANL*SLHQTCHYAN*NQRTEGTYMYFRQICRSLTL*SEPPLEH*YFDMGQKITRQNQKCHLQTDTHQVCLSSLLQHNQESMA*CTSQRGWVC  7480

Range 10: 7532 to 7852 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
238.0 bits(513) 0.0 107/107(100%) 0/107(0%) Plus/Minus
Query        1  ALASSKDFSLASKASFDSPGNLPGGLAI*QC*Q**SISSPIWLTPKAFKPPSTSLTVEASASLGPQFSINIDSPVALMRQP*LSPLLLSTCARIRVAIAAPTRTRIP  321
                ALASSKDFSLASKASFDSPGNLPGGLAI*QC*Q**SISSPIWLTPKAFKPPSTSLTVEASASLGPQFSINIDSPVALMRQP*LSPLLLSTCARIRVAIAAPTRTRIP
Subject   7532  ALASSKDFSLASKASFDSPGNLPGGLAI*QC*Q**SISSPIWLTPKAFKPPSTSLTVEASASLGPQFSINIDSPVALMRQP*LSPLLLSTCARIRVAIAAPTRTRIP  7852

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 9

Range 1: 6708 to 7847 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
832.7 bits(1811) 0.0 352/380(93%) 0/380(0%) Plus/Minus
Query        6  CQLQRFQSGLKSFI*LTWQPSWWARHMTMLTMIINFFTNMANP*SLQTSQHFLNC*SKRLTWATILN*Y*LPCSPYETTMIITIIAVDMCKD*GCNCSAYKNQNSKQIVHIWRPLILLQLLKAQNSQTDQKAQSLGMTVWDHNMLCFWCRPYNALHVEIDVCCPLSMANLTFLGNAAPSQCPSQSSTG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLIF*YGSENNTSKPEMSLTDRYSSSMFIFPFTAQPGEYGLMYLPERLGVSGTPAVKAMKLSS  1145
                CQLQRFQSG KSFI*LTWQPSWWA H+TMLTMIINFFTNMANP*SLQTS HFLNC*SK LTWATI N*Y*LPCSPYETT+ ITIIAVDMCKD*GCN SAYKNQNSKQIVHIWRPLIL QLLK QNSQTDQKAQSLG TVWDHNMLCFWCRPYN LHVEIDVCCPLS ANLTFLGNAAPSQCPS SS  * FWPNSQVAEKA HCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNV PRTSQGSLKSELCAAAK TASLPKQISTPSTSNSNGEPVITSSDLSLC  KPKDRRYLHVF PNLQVFDFMK*ASLGTLIF*YGSENNTSK E S TDRYSSSMFIFPFTAQPGEYGLMYLPER GVSGTPAVKAMKLSS
Subject   6708  CQLQRFQSGFKSFI*LTWQPSWWACHLTMLTMIINFFTNMANP*SLQTS*HFLNC*SKCLTWATIFN*Y*LPCSPYETTLTITIIAVDMCKD*GCNYSAYKNQNSKQIVHIWRPLILSQLLKVQNSQTDQKAQSLGKTVWDHNMLCFWCRPYNVLHVEIDVCCPLSTANLTFLGNAAPSQCPSLSSME*QFWPNSQVAEKASHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVVPRTSQGSLKSELCAAAKLTASLPKQISTPSTSNSNGEPVITSSDLSLCTSKPKDRRYLHVFLPNLQVFDFMK*ASLGTLIF*YGSENNTSKSEKSFTDRYSSSMFIFPFTAQPGEYGLMYLPERFGVSGTPAVKAMKLSS  7847

Range 2: 6706 to 7848 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
819.0 bits(1781) 0.0 353/381(93%) 0/381(0%) Minus/Plus
Query        5  EDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPVDDWLGHWLGAAFPKKVKFAILRGQHTSISTWRAL*GRHQKHNILWSQTVIPKLWAFWSV*EFCAFNNCNSINGLHICTICLEFWFL*ALQLQP*SLHMSTAIMVIIMVVS*GLQGSQY*LRIVAQVRRLLQQLRKCWEV*RL*GLAXXXXXXXXXXXXXIWRAHQEGCQVSQMKLLRPD*NLWSWQ  1147
                EDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSV+D S FDVLFSDPYQNISVPREAHFIKSKTCRFG+NTCKYLLSFGF++HSDRSDEVITGSPFELDVEGVLICFGKEAV+LAAAHNSDFKLPCEVRG TFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*+AFSATCELGQN + +DD LGHWLGAAFPKKVKFA+LRGQHTSISTWR L*GRHQKHNILWSQTV PKLWAFWSV*EFC FNNC+SINGLHICTICLEFWFL*AL LQP*SLHMSTAIMVI+ VVS*GLQGSQY*L+IVAQVR LLQQLRKC EV*RL*GLAILVKKLIIIVNIV W+AHQEGCQVSQMKLL+PD*NLWSWQ
Subject   6706  EDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVNDFSDFDVLFSDPYQNISVPREAHFIKSKTCRFGKNTCKYLLSFGFDVHSDRSDEVITGSPFELDVEGVLICFGKEAVNLAAAHNSDFKLPCEVRGTTFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*DAFSATCELGQNCYSIDDRLGHWLGAAFPKKVKFAVLRGQHTSISTWRTL*GRHQKHNILWSQTVFPKLWAFWSV*EFCTFNNCDSINGLHICTICLEFWFL*AL*LQP*SLHMSTAIMVIVRVVS*GLQGSQY*LKIVAQVRHLLQQLRKC*EV*RL*GLAILVKKLIIIVNIVRWQAHQEGCQVSQMKLLKPD*NLWSWQ  7848

Range 3: 6711 to 7457 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
506.5 bits(1099) 0.0 219/249(88%) 0/249(0%) Minus/Plus
Query      396  REFHSLYGRRSRHSQPLWEVHQAILSWLCCKREDKHT**VSVCK*HFWF*RVIF*PISKYQCSKGGSLHKVKDLQIW*KYM*VPSVLWF*FA**QV**SDYRFAI*VGC*GCANLLWQGGS*FSGCA*FRFQTSL*GTRCYI*CCYLIEIKGSDLR**ALVLHCCNKT*EEIDHHAVKCLFSNLRIGPKLSPR*RLAWALAWCCIS*ESQICHTQGTTYINFHMEGVIGTAPKA*HIVVPNSHSQALGF  1142
                REFHS +GRRSRHS+P WEVHQAILSWLCCKREDKHT *VSVC+* F F*RVI *PISKYQCSKGGSLHKVKDLQ+W KYM*VPS+LWF* A**QV**SDYRF I*VGC*GCANLLWQGGS*   CA*FRFQTSL*GTR YI*CCYLIEIK SDL **ALVLHCCNKT*EE+DHHAV+CLFSNLRIGPKL   *R AWALAWCCIS*ESQIC TQGTTYINFHME VIGTAPKA*HIVVP+S SQALGF
Subject   6711  REFHSFHGRRSRHSKPFWEVHQAILSWLCCKREDKHTR*VSVCE*LF*F*RVIL*PISKYQCSKGGSLHKVKDLQVWQKYM*VPSILWF*CA**QV**SDYRFTI*VGC*GCANLLWQGGS*LGSCA*FRFQTSL*GTRYYI*CCYLIEIKRSDL***ALVLHCCNKT*EEVDHHAVRCLFSNLRIGPKLLLH*R*AWALAWCCIS*ESQICRTQGTTYINFHMEDVIGTAPKA*HIVVPDSLSQALGF  7457

Range 4: 7494 to 7850 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
267.7 bits(578) 0.0 115/119(97%) 0/119(0%) Minus/Plus
Query        3  **Y*RPPYMYYLFGILVLVGAAIATLILAHVDSNNGDNHGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HCHMASPPGRLPGESNEAFEARLKSLELAR  359
                **Y*RPPYMYYLFGILVLVGA IATLILAHVDSNNGD+ GCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HC MASPPGRLPGESNEAFEARLKSLELAR
Subject   7494  **Y*RPPYMYYLFGILVLVGAVIATLILAHVDSNNGDSKGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HC*MASPPGRLPGESNEAFEARLKSLELAR  7850

Range 5: 6709 to 7662 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
659.1 bits(1432) 0.0 290/318(91%) 0/318(0%) Plus/Minus
Query      191  GHNSQLILTPL*PL*DNHDYHHYCCRHVXXXXXXXXXXXEPEFQTDSTYMEAVNTITIIKGTKFSD*PKSPELGNDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMPKPIVNGVIVLAQFAGC*KGISLHDDQFLPMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSYLTRKFEIGIMRSR*INCLLAKAN*HTLNIQLKWRTCNHFIRPVTMQIKTKGQKVLTCIFTKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYLPFYSTTRRVWLDVPPREVGSVGNAGRKGYETLV  1144
                GHN QLILTPL*PL*DN  YHHYCCRHVQGLGLQLQRLQEPEFQTDSTYMEAVNTITIIKG KFSD*PKSPELG DCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMPKPIVNGV VLAQFAGC*KGISLHDDQ LPMSCCSNVEPVLII GRI *FQ*GNNIKCSTSYLTRKFEI IMRS  +NCLLAKAN*HTLNIQLKW TCNHFIRPVTM IKTKG KVLTCIF K AGL*LYEVSLPWNTDILIWVR+*HVK R V +RQILI+YVYLPFYSTTRRVWLDVPPR+V SVGNAGR+ YETLV
Subject   6709  GHNFQLILTPL*PL*DNPYYHHYCCRHVQGLGLQLQRLQEPEFQTDSTYMEAVNTITIIKGAKFSD*PKSPELGKDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDDQLLPMSCCSNVEPVLIIRGRIS*FQ*GNNIKCSTSYLTRKFEI*IMRSCQVNCLLAKAN*HTLNIQLKW*TCNHFIRPVTMHIKTKG*KVLTCIFAKPAGL*LYEVSLPWNTDILIWVRE*HVKIRKVIHRQILIEYVYLPFYSTTRRVWLDVPPRKVWSVGNAGRESYETLV  7662

Range 6: 7705 to 7848 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
109.2 bits(232) 0.0 44/48(92%) 0/48(0%) Plus/Minus
Query        5  LPAPKISVWPQKLHLTHLATFLVGSPYDNVNNDNQFLHQYG*PLKPSN  148
                LPAPKISVW QKLHLTHLATFLVG P +NVNNDNQFLHQYG*PLKPSN
Subject   7705  LPAPKISVWLQKLHLTHLATFLVGLPSNNVNNDNQFLHQYG*PLKPSN  7848

Range 7: 6707 to 7849 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
720.5 bits(1566) 0.0 347/381(91%) 0/381(0%) Minus/Plus
Query        4  RTRVS*PLRPAFPTLPTSLGGTSSHTLLVVL*KGR*TYLMSICL*VTFLVLTCYFLTHIKISVFQGRLTS*SQRPADLVKIHVSTFCPLVLICIVTGLMK*LQVRHLSWMLRVC*FAXXXXXXXXXXXXXXISNFLVRYEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIGRN*SSCSEMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPKQSFPSSGLFGQSENFVPLIIVIVLTASIYVLSVWNSGSXXXXXXXXXXXXXRQQ*W**SWLSHKGYRGVNIN*ELWPK*GACFNS*GSAGRFEGFRG*PYW*RN*LSLLTLSYGEPTRKVAR*VK*SF*GQTEIFGAGK  1146
                +TRVS*  RPAFPTL T LGGTSSHTLLVVL*KGR*TY MSICL*+TFL+LTCY LTHIKISVFQGRLTS*SQRPA L KIHVSTF PLVL+CIVTGLMK*LQV HLSWMLRVC*FALARRQL  +LRII ISNFLVRYEVLHLMLLPY*NQ IRP MISTGSTLLQQDIGR+*SSCSEMPFQQPANWAKT+TPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGP+QSFPSSGLFGQSENF PLIIVIVLTASIYVLSVWNSGSCRRCNCNPNPCTCRQQ*W**  LSHKGYRGVNIN*+LWPK*G CFNS*GS  RFEGFRG*PYW*RN*LSLLTL  G+PTRKVAR*VK*SF* QTEIFGAGK
Subject   6707  KTRVS*LSRPAFPTLQTFLGGTSSHTLLVVL*KGR*TYSMSICL*MTFLILTCYSLTHIKISVFQGRLTS*SQRPAGLAKIHVSTFYPLVLMCIVTGLMK*LQVHHLSWMLRVC*FALARRQLTWQLRIIQISNFLVRYEVLHLMLLPY*NQEIRPLMISTGSTLLQQDIGRS*SSCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPRQSFPSSGLFGQSENFAPLIIVIVLTASIYVLSVWNSGSCRRCNCNPNPCTCRQQ*W***GLSHKGYRGVNIN*KLWPK*GTCFNS*GSVRRFEGFRG*PYW*RN*LSLLTLLDGKPTRKVAR*VK*SF*SQTEIFGAGK  7849

Range 8: 6746 to 7477 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
471.2 bits(1022) 0.0 214/244(88%) 0/244(0%) Plus/Minus
Query      376  KILRLTKKPRAWE*LFGTTICYAFGAVPITPSMWKLMYVVP*VWQI*LS*EMQHXXXXXXXXXXGDSFGPIRRLLKRHFTA**SISSYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLVPHKEV*NRNYAQPLNQLPPCQSKLAHPQHPTQMANL*SLHQTCHYAN*NQRTEGTYMYFHQICRSLTL*SEPPLEH*YFDMGQKITRQNQKCHLQTDTHQVCLSSLLQHNQESMA*CTSQRGWEC  1107
                KILRLTKKPRAWE L GTTICYAFGAVPIT SMWKLMYVVP*V QI*LS*EMQHQANAQA RQ  +SFGPIRRLLKRH TA**S SSYVLLQQCRTSAYH+RSD LISIR*QHQM*+LVPHKEV*N NYAQ  + LPPCQSKLAHPQHPTQM NL*SLHQTCHYA+ NQR EGTYMYF Q CRSLTL*SEPPLEH*YFDMGQ+ITRQNQK H QTDTH+VCLSSLLQHNQESMA*CTSQ+G EC
Subject   6746  KILRLTKKPRAWERLSGTTICYAFGAVPITSSMWKLMYVVP*VRQI*LS*EMQHQANAQAYRQWSNSFGPIRRLLKRHLTA**STSSYVLLQQCRTSAYHQRSDLLISIR*QHQM*YLVPHKEV*NLNYAQLPS*LPPCQSKLAHPQHPTQMVNL*SLHQTCHYAHQNQRIEGTYMYFCQTCRSLTL*SEPPLEH*YFDMGQRITRQNQKSHSQTDTHRVCLSSLLQHNQESMA*CTSQKGLEC  7477

Range 9: 7532 to 7852 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
232.5 bits(501) 0.0 104/107(97%) 0/107(0%) Plus/Minus
Query        1  ALASSKDFSLASKASFDSPGNLPGGLAI*QC*Q**SISSPIWLTPKAFKPPSTSLTVEASASLGPQFSINIDSPVALMRQP*LSPLLLSTCARIRVAIAAPTRTRIP  321
                ALASSKDFSLASKASFDSPGNLPGGLAI*QC*Q**SISSPIWLTPKAFKPP+TSLTVEASASLGPQFSINIDSPVALMRQP LSPLLLSTCARIRVAI APTRTRIP
Subject   7532  ALASSKDFSLASKASFDSPGNLPGGLAI*QC*Q**SISSPIWLTPKAFKPPNTSLTVEASASLGPQFSINIDSPVALMRQPLLSPLLLSTCARIRVAITAPTRTRIP  7852

Nucleotide Sequence (1368 letters)

Query ID:ds2016-132_4
Query definition:No definition line
Query length:951
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 16 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
137
274
411
548
685
822
959
1096
1233
1368

Descriptions

Alignments

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 15

Range 1: 6544 to 7542 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
568.3 bits(1234) 0.0 237/333(71%) 0/333(0%) Plus/Plus
Query       13  *ALSVWHGASIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDEAFVAFTAGVPDSPNLTGRYIKPYAPGCAVQGKINILDEYLSVSDTSGFDVLFSDPYQNVSIPREAHFIKTRMCRFGTNICKYFQSFGFDVCSDGVDKVVVGSPFELEVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFDVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*NAFSATCQLG*DHNPINHWFGHWVGSALLKEIKSTIFRRQYSPVPTRRALQGRHEECNLLWP*AVIPKLRNIRSV*KFRTSNIGRDSGRFYTCIISLEFW  1011
                *ALSVWH   IMNNLVKALS FEFVGV+ VL+FPVVVHSVPGSGKSSLIRELI+EDE+F+AFTAGVPD+PNL+GRYIKPY+PGCAV+GKINILDEYLSV+D S FDVLFSDPYQN+S+PREAHFIK++ CRFG N CKY  SFGFDV SD  D+V+ GSPFEL+VEGVLICFGKEAV+LA AHNSDFKLPCEVRG+TFDVVTLLKSRDPTS+DKHWFY+AATRHR KLIIMQ*+AFSATC+LG +   I+   GHW+G+A  K++K  + R Q++ + T R L GRH++ N+LW   V PKL    SV*+F T N        + C I LEFW
Subject   6544  *ALSVWHY*IIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVNDFSDFDVLFSDPYQNISVPREAHFIKSKTCRFGKNTCKYLLSFGFDVHSDRSDEVITGSPFELDVEGVLICFGKEAVNLAAAHNSDFKLPCEVRGTTFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*DAFSATCELGQNCYSIDDRLGHWLGAAFPKKVKFAVLRGQHTSISTWRTL*GRHQKHNILWSQTVFPKLWAFWSV*EFCTFNNCDSINGLHICTICLEFW  7542

Range 2: 7518 to 7883 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
215.5 bits(464) 0.0 95/122(78%) 0/122(0%) Plus/Plus
Query      987  MHYLFGILVLVGVAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTVREVLGGLKALGISHTTEEIDYRC*IG*MASQIGKLPGESNEAFEARLKSLELARAQKQLKGQTHP  1352
                M+YLFGILVLVG  IA  ILAHVD+++G  +GC IRATGESILIENCGPSEALASTV+EVLGGLKALG+SH  EEIDY C*  *MAS  G+LPGESNEAFEARLKSLELARAQKQ +G   P
Subject   7518  MYYLFGILVLVGAVIATLILAHVDSNNGDSKGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HC*MASPPGRLPGESNEAFEARLKSLELARAQKQPEGSNQP  7883

Range 3: 6545 to 7741 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
492.7 bits(1069) 0.0 238/399(60%) 0/399(0%) Plus/Plus
Query       14  RP*VFGMVRVL*II*SKLCLRLNLLVCFVCLNFQLLFTVFQVAVKVA**GSLFLKTRLLWPLQQVCQTVQI*QEGTSSPTLQGVQCKGK*TYLMSTCLSLILLALMCCSQTLTRMSAFQERHTS*KPECVGLVPTSASTFNLLALMFVVMGWIKLL*GRHLNWRLRGSSFALERRP*I*QLHTILTSSCPARCGVQHLTL*RY*SPGIQLQKISIGSTLQPQGIEVN***CSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGHYRDGTKSVTYCGPRQSFPSSGIFGQSENFVPLILVVTLVAFIHALSLWNSGPSRSCNCHPNPCSCRQQ*WQSPRLLY*GHWRVYFD*KLWPKRGPCINSEGGIGRFEGFRN*PYY*R  1210
                RP*VFG++R+L*I * KLCLRL+L V   C +FQLLF  F V VKV ** S  LKTR+    +    T+Q    GTSS TL  V  KG+*TY MS CL +  L L C S T  ++S FQ R TS*     GL     STF  L LM +V G +K L   HL+W LR   FAL RR    QL  I  S+   R  V HL L  Y*+  I+   IS GSTL  Q I  +*  CS+MPFQQPANWAKT+TPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGG YRDGTKS+TYCGPRQSFPSSG+FGQSENF PLI+V+ L A I+ LS+WNSG  R CNC+PNPC+CRQQ*W    L + G+  V  +*KLWPK G C NS G + RFEGFR *PY+*R
Subject   6545  RP*VFGIIRLL*IT*LKLCLRLSLWVFIACSDFQLLFIAFLVVVKVV**ESSLLKTRVS*LSRPAFPTLQTFLGGTSSHTLLVVL*KGR*TYSMSICL*MTFLILTCYSLTHIKISVFQGRLTS*SQRPAGLAKIHVSTFYPLVLMCIVTGLMK*LQVHHLSWMLRVC*FALARRQLTWQLRIIQISNFLVRYEVLHLMLLPY*NQEIRPLMISTGSTLLQQDIGRS*SSCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPRQSFPSSGLFGQSENFAPLIIVIVLTASIYVLSVWNSGSCRRCNCNPNPCTCRQQ*W***GLSHKGYRGVNIN*KLWPK*GTCFNS*GSVRRFEGFRG*PYW*R  7741

Range 4: 7801 to 7863 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.1 bits(68) 0.0 13/21(62%) 0/21(0%) Plus/Plus
Query     1270  NQMRRLKPGLNHWSWLELKSN  1332
                +QM+ LKP  N WSW ELKS+
Subject   7801  SQMKLLKPD*NLWSWQELKSS  7863

Range 5: 6641 to 7882 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
393.8 bits(853) 0.0 215/414(52%) 0/414(0%) Minus/Minus
Query      110  GCVWPFSCF*ALANSSDLSRASNASFDSPGSLPI*LAI*PI*QR*SISSVVWLIPKAFKPPNTSLTVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIATPTRTRIPKR*CMYKSDQSHDQY*RYEIFRLTEYS*AWE*LPRATIGYTLRAVPVMPSVWELVNIVS*IW*I*FP*EVQNQPNAQTNG*WGYGLSPVGRLLKRHFTALLSVYFDALWLQRRTNAYLLKLDPWTSITSQRQMLNPAPRRAT*SQNCVQLLDLRPPFQSK*GPPQPPVQMATLQQLYPPHHYKHQSQKIESTCRCWYQTYTFWFL*SVPLLEC*HSGKGLRTAHQSQKYQRQTSTHQVCLFSLALHTLERRA*CTFLSDLDCLAHLL*RPQKPRLQK*APLLGYFYRYLEHCEQQLE  1351
                G + P  CF*ALA+S D S AS ASFDSPG+LP  LAI*  *Q *SISS +WL PKAFKPPNTSLTV+A ASLGPQFSI IDSPVAL++QP   PLLLST ARI +AI  PTRTRIP R* +Y     +  Y*R +I RLT+   AWE L   TI Y   AVP+  S+W+L+ +V *+  I*  *E+Q+Q NAQ    W     P+ RLLKRH TA  S     L  Q RT+AY  + D   SI  Q QM    P +  *+ N  QL    PP QSK   PQ P QM  L  L+   HY HQ+Q+IE T   + QT     L*S P LE *+   G R   Q+QK   QT TH+VCL SL  H  E  A*CT    L+C     *+    RLQ *A L  YFY Y E  EQQLE
Subject   6641  GWLEPSGCF*ALASSKDFSLASKASFDSPGNLPGGLAI*QC*Q**SISSPIWLTPKAFKPPNTSLTVEASASLGPQFSINIDSPVALMRQPLLSPLLLSTCARIRVAITAPTRTRIPNR*YIYGGR*YYHNY*RCKILRLTKKPRAWERLSGTTICYAFGAVPITSSMWKLMYVVP*VRQI*LS*EMQHQANAQAYRQWSNSFGPIRRLLKRHLTA**STSSYVLLQQCRTSAYHQRSDLLISIR*QHQM*YLVPHKEV*NLNYAQLPS*LPPCQSKLAHPQHPTQMVNL*SLHQTCHYAHQNQRIEGTYMYFCQTCRSLTL*SEPPLEH*YFDMGQRITRQNQKSHSQTDTHRVCLSSLLQHNQESMA*CTSQKGLECRERRP*KL*NSRLQ**ALLSNYFYHYQERYEQQLE  7882

Range 6: 6540 to 6614 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
44.6 bits(91) 0.0 20/25(80%) 0/25(0%) Minus/Minus
Query        9  NSNADKALTKLFIILAPCQTLKA*T  83
                NSN DKALTKLFII+  CQTLKA*+
Subject   6540  NSNVDKALTKLFIII**CQTLKA*S  6614

Range 7: 6655 to 7731 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
388.7 bits(842) 0.0 192/359(53%) 0/359(0%) Minus/Minus
Query      124  YG*FLKPSNLPIPPSLLMQGPRLGHNFQSK*TLQWP**SNLGDCHYCCLHEXXXXXXXXXXXGPEFQRDNACIKATRVTTNIRGTKFSD*PNIPELGNDCLGPQ*VTLFVPSL*CPPCGNW*ILSPEYGRFDFLKKCRTNPMPKPMVNGVMVLAQLAGC*KGILLHYYQFTSMPCGCNVEPMLIF*SWIPGLQ*RHNVKC*TPHLAGQLEVRIVCNC*IYGLLSKANEDPLNLQFKWRPYNNFIHPITTNIKAKRLKVLADVGTKPTHSGFYEVCLSWNADILVRV*EQHIKARSIRDRQVLIKYVYFPLHCTPWSVGLDVPSCQIWTVWHTCCKGHKSLVFRNKLPY*ATFTATWNTV  1200
                YG* LKPSNL   P LL Q P LGHNFQ   T   P * N    HYCC H QG G QLQ L  PEFQ D+  ++A    T I+G KFSD*P  PELG DCLGPQ V L VPSL* PPCGN  +LSPEYG+FDFL+KC T PMPKP+VNGV VLAQ AGC*KGI LH  Q   M C  NVEP+LI    I   Q* +N+KC T +L  + E+ I+ +C +  LL+KAN   LN+Q KW   N+FI P+T +IK K  KVL  +  KP     YEV L WN DIL+ V E H+K R +  RQ+LI+YVY P + T   V LDVP  ++W+V +   + +++LVF N+L Y  TFT T N +
Subject   6655  YG*PLKPSNLLTLP*LLKQVPHLGHNFQLILTPL*PL*DNPYYHHYCCRHVQGLGLQLQRLQEPEFQTDSTYMEAVNTITIIKGAKFSD*PKSPELGKDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDDQLLPMSCCSNVEPVLIIRGRIS*FQ*GNNIKCSTSYLTRKFEI*IMRSCQVNCLLAKAN*HTLNIQLKW*TCNHFIRPVTMHIKTKG*KVLTCIFAKPAGL*LYEVSLPWNTDILIWVRE*HVKIRKVIHRQILIEYVYLPFYSTTRRVWLDVPPRKVWSVGNAGRESYETLVFSNELSYQTTFTTTRNAM  7731

Range 8: 6544 to 6606 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
39.1 bits(79) 0.0 16/21(76%) 0/21(0%) Minus/Minus
Query       13  RRQSFD*IIHNTRTMPNT*GL  75
                RRQSF+*+IHN   MPNT*GL
Subject   6544  RRQSFN*VIHNNLIMPNT*GL  6606

Range 9: 7804 to 7860 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
22.1 bits(42) 0.0 11/19(58%) 0/19(0%) Minus/Minus
Query     1273  AFEL*PTPVI*AGLQTPHL  1329
                AFEL P P I   LQ  HL
Subject   7804  AFELLPAPKISVWLQKLHL  7860

Range 10: 6717 to 7271 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
273.2 bits(590) 0.0 130/185(70%) 0/185(0%) Minus/Minus
Query      186  PSWQVAEKAFYCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTSNVEPRTSQGNLKSELCATARSTASFPKQMRTPSTSSSNGDXXXXXXXXXXXXSKPKD*KYLQMLVPNLHILVFMKCASLGMLTFW*GSENSTSKPEVSETDKYSSSMFIFPCTAHPGA*GLMYLPVRFGLSGTPAVKATK  740
                P+ QVAEKA +C++I+   CLVAA *NQCLSSEVGSLDFN VTTSNV PRTSQG+LKSELCA A+ TAS PKQ+ TPSTS+SNG+P  T S  SL TSKPKD +YL + +PNL +  FMK ASLG L F  GSEN+TSK E S TD+YSSSMFIFP TA PG  GLMYLP RFG+SGTPAVKA K
Subject   6717  PNSQVAEKASHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVVPRTSQGSLKSELCAAAKLTASLPKQISTPSTSNSNGEPVITSSDLSLCTSKPKDRRYLHVFLPNLQVFDFMK*ASLGTLIF*YGSENNTSKSEKSFTDRYSSSMFIFPFTAQPGEYGLMYLPERFGVSGTPAVKAMK  7271

Range 11: 7299 to 7832 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
137.2 bits(293) 0.0 79/178(44%) 0/178(0%) Minus/Minus
Query      768  FKPGFKRLI*FAGEXXXXXXXXXXXXTIINFFSSMANS*SLQTSQYLPHC*CKGLAWATIFNQNRLSSGPNKATLVTATTVVYMSKDLDGNCNSY*DQNSKEIMHV*KRPESRPILEVRNFQTDRIFLSLGMTA*GHNRLHSSCRPCNALRVGTGEYCLLNMVDLISLRSAEPTQCPN  1301
                F+ GFK  I*   + +    HLT LT IINFF++MAN *SLQTS +  +C* K L WATIFN   L   P + TL      V M KD   N ++Y +QNSK+I+H+ +      +L+V+N QTD+   SLG T   HN L   CRP N L V     C L+  +L  L +A P+QCP+
Subject   7299  FQSGFKSFI*LTWQPSWWACHLTMLTMIINFFTNMANP*SLQTS*HFLNC*SKCLTWATIFN*Y*LPCSPYETTLTITIIAVDMCKD*GCNYSAYKNQNSKQIVHIWRPLILSQLLKVQNSQTDQKAQSLGKTVWDHNMLCFWCRPYNVLHVEIDVCCPLSTANLTFLGNAAPSQCPS  7832

Range 12: 6545 to 6595 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.0 bits(57) 0.0 13/17(76%) 0/17(0%) Minus/Minus
Query       14  L*LNYS*YSHHAKHLRP  64
                L*L+YS* S++AKHLRP
Subject   6545  L*LSYS**SNNAKHLRP  6595

Range 13: 6675 to 7475 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
208.6 bits(449) 0.0 121/267(45%) 0/267(0%) Plus/Plus
Query      144  *K*PNKGAYF*RRGFCGLYSRCARQSKSDRKVHQALRSRVCSARENKHT**VLVCL*YFWL*CAVLRPLPECQHSKRGTLHKNQNV*VWYQHLQVLSIFWL*CL**WGG*SCCRVAI*TGG*GGPHLLWKGGRRSSSCTQF*LQVALRGAGFNI*RCDVIEVQGSNFRR*ALVLRCSHKASK*TDNNAVKCLFSNLPTGLRP*PH*PLVWALGWFCTS*GNQIYHIQETIFTSSHTEGITGTARRV*PIVALGSHSQAQEYSVSLKI  944
                *K* +K A++*RR F   + R +R SK   +VHQA+ S +C  RE+KHT *V VC * F  *  +L P+ + Q SK G+LHK +++ VW +++ V SI W *C **   *S  R  I* G *G  +LLW+GG    SC  F  Q +L G  + I* C +IE++ S+   *ALVL C +K  +  D++AV+CLFSNL  G +   H*   WAL W C S* +QI   Q T + + H E + GTA + * IV   S SQA  + VSL+I
Subject   6675  *K*FDKRAHY*RREFHSFHGRRSRHSKPFWEVHQAILSWLCCKREDKHTR*VSVCE*LF*F*RVIL*PISKYQCSKGGSLHKVKDLQVWQKYM*VPSILWF*CA**QV**SDYRFTI*VGC*GCANLLWQGGS*LGSCA*FRFQTSL*GTRYYI*CCYLIEIKRSDL***ALVLHCCNKT*EEVDHHAVRCLFSNLRIGPKLLLH*R*AWALAWCCIS*ESQICRTQGTTYINFHMEDVIGTAPKA*HIVVPDSLSQALGFLVSLRI  7475

Range 14: 6543 to 6626 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.1 bits(92) 0.0 19/28(68%) 0/28(0%) Plus/Plus
Query       12  LGLKCLAWCEYYE*FSQSFVCV*ICWCV  95
                LGLKCLA  +YYE* S SFV V*+C C+
Subject   6543  LGLKCLALLDYYE*LS*SFVYV*VCGCL  6626

Range 15: 7636 to 7728 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.3 bits(62) 0.0 20/31(65%) 0/31(0%) Plus/Plus
Query     1105  SLF*LKIVAQARPLHQQ*GRYWEV*RL*ELA  1197
                S +*LKIVAQ R L QQ  +  EV*RL* LA
Subject   7636  SQY*LKIVAQVRHLLQQLRKC*EV*RL*GLA  7728

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: Ham1

Sequence ID: AB277788.1 Length: 2876 Number of Matches: 11

Range 1: 897 to 2114 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
850.1 bits(1849) 0.0 367/406(90%) 0/406(0%) Minus/Minus
Query      110  F*ALANSSDLSRASNASFDSPGSLPI*LAI*PI*QR*SISSVVWLIPKAFKPPNTSLTVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIATPTRTRIPKR*CMYKSDQSHDQY*RYEIFRLTEYS*AWE*LPRATIGYTLRAVPVMPSVWELVNIVS*IW*I*FP*EVQNQPNAQTNG*WGYGLSPVGRLLKRHFTALLSVYFDALWLQRRTNAYLLKLDPWTSITSQRQMLNPAPRRAT*SQNCVQLLDLRPPFQSK*GPPQPPVQMATLQQLYPPHHYKHQSQKIESTCRCWYQTYTFWFL*SVPLLEC*HSGKGLRTAHQSQKYQRQTSTHQVCLFSLALHTLERRA*CTFLSDLDCLAHLL*RPQKPRLQK*APLLGYFYRYLEHCEQQLE  1327
                F  LANS  LS AS ASFDSPG+ P *LAI    Q *SI S  WL PKAF+PPNTSLTV ARASLGPQFSI IDSPVAL+KQP  LPLLLST ARIWMAIATPTRTRIPKR*CMYKSDQSHDQY*RYEIFRLTEYS*AWE*LPRATIGY LRAVPVMPSVWELVNI+S*IW*I*FP*EVQNQPNAQTN *W YGLSPVGRLLKRHFTALLS+YFDALWLQRRTNAYLL+LDPWTSITS RQMLNPA RRAT*SQNCVQLLDLRPPFQSK* PPQPPVQMATLQQLYPPHHYKH SQKIE TCRCWYQTY FWFL*SVPLLEC*HSGKGLRTAHQSQKYQRQTSTHQVCLFSLALHTLERRA*CTFL DLDCLAHLL*RPQKPRLQK*APLLGYFY YLEHCEQQLE
Subject    897  FWVLANSKALSLASYASFDSPGNFPT*LAIQLSQQL*SILSTFWLTPKAFRPPNTSLTVAARASLGPQFSISIDSPVALMKQP*WLPLLLSTCARIWMAIATPTRTRIPKR*CMYKSDQSHDQY*RYEIFRLTEYS*AWE*LPRATIGYALRAVPVMPSVWELVNIIS*IW*I*FP*EVQNQPNAQTNS*WSYGLSPVGRLLKRHFTALLSIYFDALWLQRRTNAYLLELDPWTSITSLRQMLNPALRRAT*SQNCVQLLDLRPPFQSK*EPPQPPVQMATLQQLYPPHHYKH*SQKIEGTCRCWYQTYRFWFL*SVPLLEC*HSGKGLRTAHQSQKYQRQTSTHQVCLFSLALHTLERRA*CTFLLDLDCLAHLL*RPQKPRLQK*APLLGYFYHYLEHCEQQLE  2114

Range 2: 796 to 870 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.1 bits(116) 0.0 24/25(96%) 0/25(0%) Minus/Minus
Query        9  NSNADKALTKLFIILAPCQTLKA*T  83
                NSNADKALTKLFIIL PCQTLKA*T
Subject    796  NSNADKALTKLFIILTPCQTLKA*T  870

Range 3: 799 to 1731 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
646.2 bits(1404) 0.0 293/311(94%) 0/311(0%) Plus/Plus
Query       12  LGLKCLAWCEYYE*FSQSFVCV*ICWCVLXXXXXXXXXXXXR*R*K*PNKGAYF*RRGFCGLYSRCARQSKSDRKVHQALRSRVCSARENKHT**VLVCL*YFWL*CAVLRPLPECQHSKRGTLHKNQNV*VWYQHLQVLSIFWL*CL**WGG*SCCRVAI*TGG*GGPHLLWKGGRRSSSCTQF*LQVALRGAGFNI*RCDVIEVQGSNFRR*ALVLRCSHKASK*TDNNAVKCLFSNLPTGLRP*PH*PLVWALGWFCTS*GNQIYHIQETIFTSSHTEGITGTARRV*PIVALGSHSQAQEYSVSLKI  944
                LGLKCLAWCEYYE* SQSFVCV*ICW VLC *ISSCCSQCSR* *K*PNKGA+F*RRGFCGL+SRCARQSKS+RKVHQALRSRVCSARENKHT**VLVCL*YFWL*CAVLRPLPECQHSKRGTLHKNQN+*VWYQHLQV SIFWL*CL**WGG*SCCRVAI*TGG*GG HLLWKGGRRSSSCTQF*LQVALR AGFNI*R DVIEVQGSN RR*ALVLRCSHKASK* DNNAVKCLFSNLPTGLRP* H* LVWALGWFCTS*GNQIYHIQE IFTSSHTEGITGTARR *PIVALGSHSQAQEYSVSLKI
Subject    799  LGLKCLAWCEYYE*LSQSFVCV*ICWRVLCT*ISSCCSQCSR*W*K*PNKGAHF*RRGFCGLHSRCARQSKSNRKVHQALRSRVCSARENKHT**VLVCL*YFWL*CAVLRPLPECQHSKRGTLHKNQNL*VWYQHLQVPSIFWL*CL**WGG*SCCRVAI*TGG*GGSHLLWKGGRRSSSCTQF*LQVALRSAGFNI*RSDVIEVQGSNSRR*ALVLRCSHKASK*IDNNAVKCLFSNLPTGLRP*LH*LLVWALGWFCTS*GNQIYHIQEIIFTSSHTEGITGTARRA*PIVALGSHSQAQEYSVSLKI  1731

Range 4: 1774 to 2139 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
228.3 bits(492) 0.0 98/122(80%) 0/122(0%) Plus/Plus
Query      987  MHYLFGILVLVGVAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTVREVLGGLKALGISHTTEEIDYRC*IG*MASQIGKLPGESNEAFEARLKSLELARAQKQLKGQTHP  1352
                MHYLFGILVLVGVAIAIQILAHVD+SSG+HQGCFIRATGESILIENCGPSEALA+TV+EVLGGLKALG+S   ++IDY C*  *MASQ+GKLPGESNEA+EARLK+LELAR QK  +    P
Subject   1774  MHYLFGILVLVGVAIAIQILAHVDSSSGNHQGCFIRATGESILIENCGPSEALAATVKEVLGGLKALGVSQKVDKIDYSC*DS*MASQVGKLPGESNEAYEARLKALELARTQKAPEVSNQP  2139

Range 5: 798 to 1985 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
831.8 bits(1809) 0.0 357/396(90%) 0/396(0%) Plus/Plus
Query       11  FRP*VFGMVRVL*II*SKLCLRLNLLVCFVCLNFQLLFTVFQVAVKVA**GSLFLKTRLLWPLQQVCQTVQI*QEGTSSPTLQGVQCKGK*TYLMSTCLSLILLALMCCSQTLTRMSAFQERHTS*KPECVGLVPTSASTFNLLALMFVVMGWIKLL*GRHLNWRLRGSSFALERRP*I*QLHTILTSSCPARCGVQHLTL*RY*SPGIQLQKISIGSTLQPQGIEVN***CSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGHYRDGTKSVTYCGPRQSFPSSGIFGQSENFVPLILVVTLVAFIHALSLWNSGPSRSCNCHPNPCSCRQQ*WQSPRLLY*GHWRVYFD*KLWPKRGPCINSEGGIGRFEGFRN*P  1198
                FRP*VFGMV VL*I *SKLCLRLNLL CFV LNFQLLFTVFQV VKVA**GS FLKTRLLWP QQVCQTVQI*QEGTSSPTLQGVQCKGK*TYLMSTCLSLILLALMCCSQTLTRMSAFQERHTS*KP+ VGLVPT ASTFNLLALMFVVMGWIKLL*GRHLNWRLRG SFALERRP*I*QLHTILTSSCPA+CGVQHLT *RY*SPGIQLQKISIGSTLQPQGIEVN***CSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGHYRDGTKS+TYCGPRQSFPSSGIFGQSENFVPLILVVTLVAFIHALSLWNSGPSRSCNCHPNPC+CRQQ*WQ  RL +  H  +  +*+LW +RGP   S+ G+GR +GFR *P
Subject    798  FRP*VFGMV*VL*IT*SKLCLRLNLLACFVYLNFQLLFTVFQVVVKVA**GSSFLKTRLLWPSQQVCQTVQI*QEGTSSPTLQGVQCKGK*TYLMSTCLSLILLALMCCSQTLTRMSAFQERHTS*KPKPVGLVPTPASTFNLLALMFVVMGWIKLL*GRHLNWRLRGFSFALERRP*I*QLHTILTSSCPAKCGVQHLT**RY*SPGIQLQKISIGSTLQPQGIEVN***CSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGHYRDGTKSITYCGPRQSFPSSGIFGQSENFVPLILVVTLVAFIHALSLWNSGPSRSCNCHPNPCTCRQQ*WQPSRLFHKSHRGINTN*ELWAERGPSCYSQRGVGRSKGFRG*P  1985

Range 6: 794 to 1831 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
795.1 bits(1729) 0.0 334/346(97%) 0/346(0%) Plus/Plus
Query        7  VV*ALSVWHGASIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDEAFVAFTAGVPDSPNLTGRYIKPYAPGCAVQGKINILDEYLSVSDTSGFDVLFSDPYQNVSIPREAHFIKTRMCRFGTNICKYFQSFGFDVCSDGVDKVVVGSPFELEVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFDVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*NAFSATCQLG*DHNPINHWFGHWVGSALLKEIKSTIFRRQYSPVPTRRALQGRHEECNLLWP*AVIPKLRNIRSV*KFRTSNIGRDSGRFYTCIISLEFWS**ELQLPSKS  1044
                +V*ALSVWHG SIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDEAFVAFTAGVPDSPNLTGRYIKPYAPGCAVQGKINILDEYLSVSDTSGFDVLFSDPYQNVSIPREAHFIKT+ CRFGTN CKY QSFGF+VCSDGVDKVVVGSPFELEVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFDVVTLLKSRDPT EDKHWFYVAATRHRSKLIIMQ*NAFSATCQLG*DHN IN+WFGHWVGSALLKEIKSTIFRR YSPVPTRRALQGRHEE NLLWP*AVIPKLRNIRSV*KFRTSNIGRDSGRFYTCIISLEFWS**ELQLPSKS
Subject    794  IV*ALSVWHGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDEAFVAFTAGVPDSPNLTGRYIKPYAPGCAVQGKINILDEYLSVSDTSGFDVLFSDPYQNVSIPREAHFIKTKTCRFGTNTCKYLQSFGFNVCSDGVDKVVVGSPFELEVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFDVVTLLKSRDPTPEDKHWFYVAATRHRSKLIIMQ*NAFSATCQLG*DHNSINYWFGHWVGSALLKEIKSTIFRR*YSPVPTRRALQGRHEEHNLLWP*AVIPKLRNIRSV*KFRTSNIGRDSGRFYTCIISLEFWS**ELQLPSKS  1831

Range 7: 1883 to 1984 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.4 bits(60) 0.0 18/34(53%) 0/34(0%) Plus/Plus
Query     1096  PLESLF*LKIVAQARPLHQQ*GRYWEV*RL*ELA  1197
                P  + +*L+IV +ARP   Q  R W V*RL* LA
Subject   1883  PPGNQY*LRIVGRARP*LLQSKRCWAV*RL*GLA  1984

Range 8: 911 to 1987 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
746.6 bits(1623) 0.0 319/359(89%) 0/359(0%) Minus/Minus
Query      124  YG*FLKPSNLPIPPSLLMQGPRLGHNFQSK*TLQWP**SNLGDCHYCCLHEXXXXXXXXXXXGPEFQRDNACIKATRVTTNIRGTKFSD*PNIPELGNDCLGPQ*VTLFVPSL*CPPCGNW*ILSPEYGRFDFLKKCRTNPMPKPMVNGVMVLAQLAGC*KGILLHYYQFTSMPCGCNVEPMLIF*SWIPGLQ*RHNVKC*TPHLAGQLEVRIVCNC*IYGLLSKANEDPLNLQFKWRPYNNFIHPITTNIKAKRLKVLADVGTKPTHSGFYEVCLSWNADILVRV*EQHIKARSIRDRQVLIKYVYFPLHCTPWSVGLDVPSCQIWTVWHTCCKGHKSLVFRNKLPY*ATFTATWNTV  1200
                +G* LKP + P P  L   GPR  HN Q     +W  *++L  CHYCCLH QGFGWQLQLLLGPEFQRDNACIKATRVTTNIRGTKFSD*PNIPELGNDCLGPQ*V LFVPSL*CPPCGNW*ILSPEYGRFDFLKKCRTNPMPKP+VNGVMVLAQLAGC*KGILLHYYQFTSMPCGCNVEPMLIF SWIPGLQ*RH VKC*TPH AGQLEVRIVCNC*IYGLLSKANE+PLNLQFKWRPYNNFIHPITTNIKAKRLKVLA VGTKPT  GFYEVCLSWNADILVRV*EQHIKARSIRDRQVLIKYVYFPLHCTPWSVGLDVPSC IWTVWHTCC+GHKSLVFRN+LPY*ATFT TWNTV
Subject    911  FG*PLKPLDRPTPL*L*QLGPRSAHNSQLVLIPRWLL*NSLDGCHYCCLHVQGFGWQLQLLLGPEFQRDNACIKATRVTTNIRGTKFSD*PNIPELGNDCLGPQ*VMLFVPSL*CPPCGNW*ILSPEYGRFDFLKKCRTNPMPKPIVNGVMVLAQLAGC*KGILLHYYQFTSMPCGCNVEPMLIFWSWIPGLQ*RHYVKC*TPHFAGQLEVRIVCNC*IYGLLSKANENPLNLQFKWRPYNNFIHPITTNIKAKRLKVLAGVGTKPTGFGFYEVCLSWNADILVRV*EQHIKARSIRDRQVLIKYVYFPLHCTPWSVGLDVPSC*IWTVWHTCCEGHKSLVFRNELPY*ATFTTTWNTV  1987

Range 9: 794 to 862 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.6 bits(104) 0.0 20/23(87%) 0/23(0%) Minus/Minus
Query        7  RRQSFD*IIHNTRTMPNT*GLNN  75
                RRQSFD*+IHNT TMPNT*GLN+
Subject    794  RRQSFD*VIHNTHTMPNT*GLND  862

Range 10: 970 to 2064 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
661.3 bits(1437) 0.0 315/365(86%) 0/365(0%) Minus/Minus
Query      183  I*FAGEXXXXXXXXXXXXTIINFFSSMANS*SLQTSQYLPHC*CKGLAWATIFNQNRLSSGPNKATLVTATTVVYMSKDLDGNCNSY*DQNSKEIMHV*KRPESRPILEVRNFQTDRIFLSLGMTA*GHNRLHSSCRPCNALRVGTGEYCLLNMVDLISLRSAEPTQCPNQWLMGLWS*PSWQVAEKAFYCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTSNVEPRTSQGNLKSELCATARSTASFPKQMRTPSTSSSNGDXXXXXXXXXXXXSKPKD*KYLQMLVPNLHILVFMKCASLGMLTFW*GSENSTSKPEVSETDKYSSSMFIFPCTAHPGA*GLMYLPVRFGLSGTPAVKATKA  1277
                I*FA + +NLTRH T  TT+INF + +AN *SL T+Q+L  C   GLA  TI N      G  +  L+ ATT VYM KDLDGNCNSY*DQNSKEIMHV*KRPESRPILEVRNFQTDRIFLSLGMTA*GHNRL SSCRPCNALRVGTGEY LLNMVDLISLRSAEPTQCPNQ LM LWS*PSWQVAEKAFYCIII+LLRCLVAAT*NQCLSS VGSLDFNNVTTSNVEPRTSQGNLKSELCATARSTASFPKQMRTPSTSSSNGDPTTTLSTPSLQT KPKD*+YLQ+LVPNL +LVFMKCASLGMLTFW*GSENSTSKPEVSETDKYSSSMFIFPCTAHPGA*GLMYLPVRFGLSGTPAVKATKA
Subject    970  I*FARQFSNLTRHSTVSTTVINFINLLANP*SL*TAQHLFDCSS*GLARPTILN*Y*FPGGSYETALMVATTAVYMCKDLDGNCNSY*DQNSKEIMHV*KRPESRPILEVRNFQTDRIFLSLGMTA*GHNRLCSSCRPCNALRVGTGEYYLLNMVDLISLRSAEPTQCPNQ*LMELWS*PSWQVAEKAFYCIIINLLRCLVAAT*NQCLSSGVGSLDFNNVTTSNVEPRTSQGNLKSELCATARSTASFPKQMRTPSTSSSNGDPTTTLSTPSLQTLKPKD*RYLQVLVPNLQVLVFMKCASLGMLTFW*GSENSTSKPEVSETDKYSSSMFIFPCTAHPGA*GLMYLPVRFGLSGTPAVKATKA  2064

Range 11: 795 to 851 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
43.2 bits(88) 0.0 17/19(89%) 0/19(0%) Minus/Minus
Query        8  L*LNYS*YSHHAKHLRPKQ  64
                L*L+YS*YSHHAKHLRPK+
Subject    795  L*LSYS*YSHHAKHLRPKR  851

Rupestris stem pitting associated virus isolate RSP47 4 replicase gene, partial cds; triple gene block protein 1, triple gene block protein 2, and triple gene block protein 3 genes, complete cds; and capsid protein gene, partial cds

Sequence ID: EF105294.1 Length: 2680 Number of Matches: 11

Range 1: 921 to 2138 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
850.1 bits(1849) 0.0 370/406(91%) 0/406(0%) Minus/Minus
Query      110  F*ALANSSDLSRASNASFDSPGSLPI*LAI*PI*QR*SISSVVWLIPKAFKPPNTSLTVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIATPTRTRIPKR*CMYKSDQSHDQY*RYEIFRLTEYS*AWE*LPRATIGYTLRAVPVMPSVWELVNIVS*IW*I*FP*EVQNQPNAQTNG*WGYGLSPVGRLLKRHFTALLSVYFDALWLQRRTNAYLLKLDPWTSITSQRQMLNPAPRRAT*SQNCVQLLDLRPPFQSK*GPPQPPVQMATLQQLYPPHHYKHQSQKIESTCRCWYQTYTFWFL*SVPLLEC*HSGKGLRTAHQSQKYQRQTSTHQVCLFSLALHTLERRA*CTFLSDLDCLAHLL*RPQKPRLQK*APLLGYFYRYLEHCEQQLE  1327
                F ALANS  LS AS ASFDSPG+ P *LAI    Q * ISS  WL PKAF+PPNTSLTV ARASLGPQFSI IDSPVAL+KQP  LPLLLST ARIWMAIATPTRTRIPKR* MYKSDQSHDQY*RYEIFRLTEYS*AWE*LPRATIGYTLRAVPVMPSVWELVNIVS*IW I*FP*EVQNQPNAQTN *W YGLSPVGRLLKRHFTALLSVYFDALWLQRRTNAYLLKLDPWTSIT QRQMLNPAPRRAT*SQNCVQLLDL+PPFQSK* PPQPPVQMATLQQLYPPHHYKH SQKIE TCRCWYQTY FWFL*SVP LEC*HSGKGLRTAHQSQKYQRQTSTHQVCLFSLALHTLERRA*CT LSDLDCLAHLL*RPQKPRLQK*APLLGYFYRYLEHCEQQLE
Subject    921  FWALANSKALSLASYASFDSPGNFPT*LAIQLSQQL*LISSTFWLTPKAFRPPNTSLTVAARASLGPQFSITIDSPVALMKQP*WLPLLLSTCARIWMAIATPTRTRIPKR*RMYKSDQSHDQY*RYEIFRLTEYS*AWE*LPRATIGYTLRAVPVMPSVWELVNIVS*IWQI*FP*EVQNQPNAQTNS*WSYGLSPVGRLLKRHFTALLSVYFDALWLQRRTNAYLLKLDPWTSITLQRQMLNPAPRRAT*SQNCVQLLDLQPPFQSK*EPPQPPVQMATLQQLYPPHHYKH*SQKIEGTCRCWYQTYRFWFL*SVPPLEC*HSGKGLRTAHQSQKYQRQTSTHQVCLFSLALHTLERRA*CTSLSDLDCLAHLL*RPQKPRLQK*APLLGYFYRYLEHCEQQLE  2138

Range 2: 820 to 894 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.3 bits(110) 0.0 23/25(92%) 0/25(0%) Minus/Minus
Query        9  NSNADKALTKLFIILAPCQTLKA*T  83
                NS ADKALTKLFIIL PCQTLKA*T
Subject    820  NSKADKALTKLFIILTPCQTLKA*T  894

Range 3: 820 to 1755 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
665.0 bits(1445) 0.0 298/312(96%) 0/312(0%) Plus/Plus
Query        9  CLGLKCLAWCEYYE*FSQSFVCV*ICWCVLXXXXXXXXXXXXR*R*K*PNKGAYF*RRGFCGLYSRCARQSKSDRKVHQALRSRVCSARENKHT**VLVCL*YFWL*CAVLRPLPECQHSKRGTLHKNQNV*VWYQHLQVLSIFWL*CL**WGG*SCCRVAI*TGG*GGPHLLWKGGRRSSSCTQF*LQVALRGAGFNI*RCDVIEVQGSNFRR*ALVLRCSHKASK*TDNNAVKCLFSNLPTGLRP*PH*PLVWALGWFCTS*GNQIYHIQETIFTSSHTEGITGTARRV*PIVALGSHSQAQEYSVSLKI  944
                CLGLKCLAWCEYYE* SQSFVC *ICWCVLC *ISSCCSQCSR*R*K*PNKGA+F*RRGFCGLYSRCARQSKSDR+VHQALRSRVCSARENKHT**VLVCL*YFWL*CAVLRPLPECQHSK GTLHKNQN+*VWYQHLQV SIFWL*CL**WGG*SCCRVAI*TGG*GG HLLWKGG RSSSCTQF*LQVALRGAGFNI*RC+VIEVQGSNFRR*ALVLRCSHKASK*TDNNAVKCLFSNLPTGLRP* H* LVWALGWFCTS*GNQI HIQETIFTSSHTEGITGTARRV*PIVALGSHSQAQEYSVSLKI
Subject    820  CLGLKCLAWCEYYE*LSQSFVCF*ICWCVLCT*ISSCCSQCSR*R*K*PNKGAHF*RRGFCGLYSRCARQSKSDREVHQALRSRVCSARENKHT**VLVCL*YFWL*CAVLRPLPECQHSKGGTLHKNQNL*VWYQHLQVPSIFWL*CL**WGG*SCCRVAI*TGG*GGSHLLWKGGCRSSSCTQF*LQVALRGAGFNI*RCNVIEVQGSNFRR*ALVLRCSHKASK*TDNNAVKCLFSNLPTGLRP*LH*LLVWALGWFCTS*GNQICHIQETIFTSSHTEGITGTARRV*PIVALGSHSQAQEYSVSLKI  1755

Range 4: 1798 to 2163 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
224.7 bits(484) 0.0 97/122(80%) 0/122(0%) Plus/Plus
Query      987  MHYLFGILVLVGVAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTVREVLGGLKALGISHTTEEIDYRC*IG*MASQIGKLPGESNEAFEARLKSLELARAQKQLKGQTHP  1352
                M YLFGILVLVGVAIAIQILAHVD+SSG+HQGCFIRATGESI+IENCGPSEALA+TV+EVLGGLKALG+S   +EI+Y C*  *MASQ+GKLPGESNEA+EARLK+LELARAQK  +    P
Subject   1798  MRYLFGILVLVGVAIAIQILAHVDSSSGNHQGCFIRATGESIVIENCGPSEALAATVKEVLGGLKALGVSQKVDEINYSC*DS*MASQVGKLPGESNEAYEARLKALELARAQKAPEVSNQP  2163

Range 5: 819 to 2009 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
831.3 bits(1808) 0.0 360/397(91%) 0/397(0%) Plus/Plus
Query        8  LFRP*VFGMVRVL*II*SKLCLRLNLLVCFVCLNFQLLFTVFQVAVKVA**GSLFLKTRLLWPLQQVCQTVQI*QEGTSSPTLQGVQCKGK*TYLMSTCLSLILLALMCCSQTLTRMSAFQERHTS*KPECVGLVPTSASTFNLLALMFVVMGWIKLL*GRHLNWRLRGSSFALERRP*I*QLHTILTSSCPARCGVQHLTL*RY*SPGIQLQKISIGSTLQPQGIEVN***CSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGHYRDGTKSVTYCGPRQSFPSSGIFGQSENFVPLILVVTLVAFIHALSLWNSGPSRSCNCHPNPCSCRQQ*WQSPRLLY*GHWRVYFD*KLWPKRGPCINSEGGIGRFEGFRN*P  1198
                LFRP*VFGMV VL*I *SKLCL LNLLVCFV LNFQLLFTVFQVAVKVA**GS FLKTRLLWPLQQVCQTVQI*Q GTSSPTLQGVQCKGK*TYLMSTCLSLILLALMCCSQTLTRMSAFQ RHTS*KP+ VGLVPT ASTFNLLALMFVVMGWIKLL*GRHLNWRLRG SFALERR *I*QLHTILTSSCPARCGVQHLTL*RY*SPGIQLQKISIGSTLQPQGIEVN***CSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGHYRDGTKS+TYCGPRQSFPSSGIFGQSENFVPLILVVTLVAFIHALSLWNSGPSRSCNCHPNPC+CRQQ*WQ  RL +  H  V  +*+LW +RGP   S+ G+GR +GFR *P
Subject    819  LFRP*VFGMV*VL*IT*SKLCLLLNLLVCFVYLNFQLLFTVFQVAVKVA**GSSFLKTRLLWPLQQVCQTVQI*QGGTSSPTLQGVQCKGK*TYLMSTCLSLILLALMCCSQTLTRMSAFQGRHTS*KPKPVGLVPTPASTFNLLALMFVVMGWIKLL*GRHLNWRLRGFSFALERRL*I*QLHTILTSSCPARCGVQHLTL*RY*SPGIQLQKISIGSTLQPQGIEVN***CSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGHYRDGTKSITYCGPRQSFPSSGIFGQSENFVPLILVVTLVAFIHALSLWNSGPSRSCNCHPNPCTCRQQ*WQPSRLFHKSHRGVNSN*ELWAERGPSCYSQRGVGRSKGFRG*P  2009

Range 6: 818 to 1855 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
799.3 bits(1738) 0.0 334/346(97%) 0/346(0%) Plus/Plus
Query        7  VV*ALSVWHGASIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDEAFVAFTAGVPDSPNLTGRYIKPYAPGCAVQGKINILDEYLSVSDTSGFDVLFSDPYQNVSIPREAHFIKTRMCRFGTNICKYFQSFGFDVCSDGVDKVVVGSPFELEVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFDVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*NAFSATCQLG*DHNPINHWFGHWVGSALLKEIKSTIFRRQYSPVPTRRALQGRHEECNLLWP*AVIPKLRNIRSV*KFRTSNIGRDSGRFYTCIISLEFWS**ELQLPSKS  1044
                +V*ALSVWHG SIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDEAFVAFTAGVPDSPNLTGRYIKPYAPGCAVQGKINILDEYLSVSDTSGFDVLFSDPYQNVSIPREAHFIKT+ CRFGTN CKY QSFGF+VCSDGVDKVVVGSPFELEVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFDVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*NAFSATCQLG*DHN IN+WFGHWVGSALLKEIKS IFRRQYSPVPTRRALQGRHEE NLLWP*AVIPKLRNIRSV*KFRTSNIGRDSGRFYTC+ISLEFWS**ELQLPSKS
Subject    818  IV*ALSVWHGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDEAFVAFTAGVPDSPNLTGRYIKPYAPGCAVQGKINILDEYLSVSDTSGFDVLFSDPYQNVSIPREAHFIKTKTCRFGTNTCKYLQSFGFNVCSDGVDKVVVGSPFELEVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFDVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*NAFSATCQLG*DHNSINYWFGHWVGSALLKEIKSAIFRRQYSPVPTRRALQGRHEEYNLLWP*AVIPKLRNIRSV*KFRTSNIGRDSGRFYTCVISLEFWS**ELQLPSKS  1855

Range 7: 1925 to 2008 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.6 bits(56) 0.0 17/28(61%) 0/28(0%) Plus/Plus
Query     1114  *LKIVAQARPLHQQ*GRYWEV*RL*ELA  1197
                *L+IV +ARP   Q  R W V*RL* LA
Subject   1925  *LRIVGRARP*LLQSKRCWAV*RL*GLA  2008

Range 8: 935 to 2011 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
754.8 bits(1641) 0.0 322/359(90%) 0/359(0%) Minus/Minus
Query      124  YG*FLKPSNLPIPPSLLMQGPRLGHNFQSK*TLQWP**SNLGDCHYCCLHEXXXXXXXXXXXGPEFQRDNACIKATRVTTNIRGTKFSD*PNIPELGNDCLGPQ*VTLFVPSL*CPPCGNW*ILSPEYGRFDFLKKCRTNPMPKPMVNGVMVLAQLAGC*KGILLHYYQFTSMPCGCNVEPMLIF*SWIPGLQ*RHNVKC*TPHLAGQLEVRIVCNC*IYGLLSKANEDPLNLQFKWRPYNNFIHPITTNIKAKRLKVLADVGTKPTHSGFYEVCLSWNADILVRV*EQHIKARSIRDRQVLIKYVYFPLHCTPWSVGLDVPSCQIWTVWHTCCKGHKSLVFRNKLPY*ATFTATWNTV  1200
                +G* LKP + P P  L   GPR  HN Q   T +W  *++L  CHYCCLH QGFGWQLQLLLGPEFQRDNACIKATRVTTNIRGTKFSD*PNIPELGNDCLGPQ*V LFVPSL*CPPCGNW*ILSPEYGRFDFLKKCRTNPMPKP+VNGVMVLAQLAGC*KGILLHYYQFTSMPCGCNVEPMLIF*SWIPGLQ*R+NVKC*TPHLAGQLEVRIVCNC*IY LLSKANE+PLNLQFKWRPYNNFIHPITTNIKAKRLKVLA VGTKPT  GFYEVCL WNADILVRV*EQHIKARSIRDRQVLIKYVYFPLHCTPWSVGLDVP CQIWTVWHTCCKGHKSLVFRN+LPY*ATFTATWNTV
Subject    935  FG*PLKPLDRPTPL*L*QLGPRSAHNSQLLLTPRWLL*NSLDGCHYCCLHVQGFGWQLQLLLGPEFQRDNACIKATRVTTNIRGTKFSD*PNIPELGNDCLGPQ*VILFVPSL*CPPCGNW*ILSPEYGRFDFLKKCRTNPMPKPIVNGVMVLAQLAGC*KGILLHYYQFTSMPCGCNVEPMLIF*SWIPGLQ*RYNVKC*TPHLAGQLEVRIVCNC*IYSLLSKANENPLNLQFKWRPYNNFIHPITTNIKAKRLKVLAGVGTKPTGFGFYEVCLPWNADILVRV*EQHIKARSIRDRQVLIKYVYFPLHCTPWSVGLDVPPCQIWTVWHTCCKGHKSLVFRNELPY*ATFTATWNTV  2011

Range 9: 818 to 883 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.6 bits(104) 0.0 20/22(91%) 0/22(0%) Minus/Minus
Query        7  RQSFD*IIHNTRTMPNT*GLNN  72
                RQSFD*+IHNT TMPNT*GLNN
Subject    818  RQSFD*VIHNTHTMPNT*GLNN  883

Range 10: 994 to 2088 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
671.9 bits(1460) 0.0 316/365(87%) 0/365(0%) Minus/Minus
Query      183  I*FAGEXXXXXXXXXXXXTIINFFSSMANS*SLQTSQYLPHC*CKGLAWATIFNQNRLSSGPNKATLVTATTVVYMSKDLDGNCNSY*DQNSKEIMHV*KRPESRPILEVRNFQTDRIFLSLGMTA*GHNRLHSSCRPCNALRVGTGEYCLLNMVDLISLRSAEPTQCPNQWLMGLWS*PSWQVAEKAFYCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTSNVEPRTSQGNLKSELCATARSTASFPKQMRTPSTSSSNGDXXXXXXXXXXXXSKPKD*KYLQMLVPNLHILVFMKCASLGMLTFW*GSENSTSKPEVSETDKYSSSMFIFPCTAHPGA*GLMYLPVRFGLSGTPAVKATKA  1277
                I*FA + +NLT H T  TT+INF + +AN *SL T+Q+L  C   GLA  TI N   L  G  +  L+ ATT VYM KDLDGNCNSY*DQNSKEI HV*KRPESRPILEVRNFQTDRIFLSLGMTA*GHNRL+SSCRPCNALRVGTGEYCLLNM DLISLRSAEPTQCPNQ LM LWS*PSWQVAEKAFYCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTSNVEPRTSQGNLKSELCATARSTASFPKQMRTPSTSSSNGDPTTTLSTPSLQT KPKD*+YLQ+LVPNL +LVFMKCASLGMLTFW*GSENSTSKPEVSETDKYSSSMFIFPCTAHPGA*GLMYLPVRFGLSGTPAVKATKA
Subject    994  I*FARQFSNLTCHSTVSTTVINFINLLANP*SL*TAQHLFDCSS*GLARPTILNYY*LPGGSYETALMVATTAVYMCKDLDGNCNSY*DQNSKEITHV*KRPESRPILEVRNFQTDRIFLSLGMTA*GHNRLYSSCRPCNALRVGTGEYCLLNMADLISLRSAEPTQCPNQ*LMELWS*PSWQVAEKAFYCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTSNVEPRTSQGNLKSELCATARSTASFPKQMRTPSTSSSNGDPTTTLSTPSLQTLKPKD*RYLQVLVPNLQVLVFMKCASLGMLTFW*GSENSTSKPEVSETDKYSSSMFIFPCTAHPGA*GLMYLPVRFGLSGTPAVKATKA  2088

Range 11: 813 to 875 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.0 bits(94) 0.0 19/21(90%) 0/21(0%) Minus/Minus
Query        2  L*LNYS*YSHHAKHLRPKQRL  64
                L*L+YS*YSHHAKHLRPKQ L
Subject    813  L*LSYS*YSHHAKHLRPKQLL  875

Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome

Sequence ID: KR054734.1 Length: 8753 Number of Matches: 12

Range 1: 6641 to 7858 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
841.4 bits(1830) 0.0 366/406(90%) 0/406(0%) Minus/Minus
Query      110  F*ALANSSDLSRASNASFDSPGSLPI*LAI*PI*QR*SISSVVWLIPKAFKPPNTSLTVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIATPTRTRIPKR*CMYKSDQSHDQY*RYEIFRLTEYS*AWE*LPRATIGYTLRAVPVMPSVWELVNIVS*IW*I*FP*EVQNQPNAQTNG*WGYGLSPVGRLLKRHFTALLSVYFDALWLQRRTNAYLLKLDPWTSITSQRQMLNPAPRRAT*SQNCVQLLDLRPPFQSK*GPPQPPVQMATLQQLYPPHHYKHQSQKIESTCRCWYQTYTFWFL*SVPLLEC*HSGKGLRTAHQSQKYQRQTSTHQVCLFSLALHTLERRA*CTFLSDLDCLAHLL*RPQKPRLQK*APLLGYFYRYLEHCEQQLE  1327
                F  LANS  LS AS ASFDSPG+ P *LAI    Q *SISS  WL PKAF+PPNTSLTV ARASLGPQFSI IDSPVAL+KQP  LPLLLST ARIWMAIATPTRTRIPKR*CMYKS QSHDQY*RYEIFRLTEYS*AWE*LPRATIGYTLRAVPVMPSVWELVNIVS*IW*I*FP*EVQNQPNAQTN *W YG SPVG LLKRHFTALLS+YFDALWLQRRTNAYLLKLDPWTSITSQRQMLNPA RRAT*SQNCVQLL LRPPFQSK* PPQPPVQMATLQQLYPPHHYKH SQKIE TCRCWYQTY FWFL*SVPLLEC* SGKGLRTAHQSQKYQRQTSTHQVCLFSLALHTLERRA*CTFL DLDCLAHLL*RPQKPRLQK*APLLGY Y YLEHCEQQLE
Subject   6641  FWVLANSKALSLASYASFDSPGNFPT*LAIQLSQQL*SISSTFWLTPKAFRPPNTSLTVAARASLGPQFSISIDSPVALMKQP*WLPLLLSTCARIWMAIATPTRTRIPKR*CMYKSHQSHDQY*RYEIFRLTEYS*AWE*LPRATIGYTLRAVPVMPSVWELVNIVS*IW*I*FP*EVQNQPNAQTNS*WSYGFSPVGWLLKRHFTALLSIYFDALWLQRRTNAYLLKLDPWTSITSQRQMLNPALRRAT*SQNCVQLLGLRPPFQSK*EPPQPPVQMATLQQLYPPHHYKH*SQKIEGTCRCWYQTYRFWFL*SVPLLEC*RSGKGLRTAHQSQKYQRQTSTHQVCLFSLALHTLERRA*CTFLLDLDCLAHLL*RPQKPRLQK*APLLGYSYHYLEHCEQQLE  7858

Range 2: 6540 to 6614 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.1 bits(116) 0.0 24/25(96%) 0/25(0%) Minus/Minus
Query        9  NSNADKALTKLFIILAPCQTLKA*T  83
                NSNADKALTKLFIIL PCQTLKA*T
Subject   6540  NSNADKALTKLFIILTPCQTLKA*T  6614

Range 3: 6666 to 7475 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
582.1 bits(1264) 0.0 253/270(94%) 0/270(0%) Plus/Plus
Query      135  R*R*K*PNKGAYF*RRGFCGLYSRCARQSKSDRKVHQALRSRVCSARENKHT**VLVCL*YFWL*CAVLRPLPECQHSKRGTLHKNQNV*VWYQHLQVLSIFWL*CL**WGG*SCCRVAI*TGG*GGPHLLWKGGRRSSSCTQF*LQVALRGAGFNI*RCDVIEVQGSNFRR*ALVLRCSHKASK*TDNNAVKCLFSNLPTGLRP*PH*PLVWALGWFCTS*GNQIYHIQETIFTSSHTEGITGTARRV*PIVALGSHSQAQEYSVSLKI  944
                R* *+*PNKGA+F*RRGFCGL+SRCARQSKS+RKVHQALRSRVCSARENKHT**VLVCL*YFWL*CAVLRPLPE QHSKRGTL+KNQN+*VWYQHLQV SIFWL*CL**WGG*SCCRVAI*TGG*GG HLLWKGGRR SSCTQF*LQVALR AGFNI*RCDVIEVQGSNFRR*ALVLRCSHKASK* DNNAVKCLFSN PTGL+P* H* LVWALGWFCTS*GNQIYHIQETIFTSSHTEGITGTARRV*PIVALGSHSQAQEYSVSLKI
Subject   6666  R*W*E*PNKGAHF*RRGFCGLHSRCARQSKSNRKVHQALRSRVCSARENKHT**VLVCL*YFWL*CAVLRPLPERQHSKRGTLYKNQNL*VWYQHLQVPSIFWL*CL**WGG*SCCRVAI*TGG*GGSHLLWKGGRRPSSCTQF*LQVALRSAGFNI*RCDVIEVQGSNFRR*ALVLRCSHKASK*IDNNAVKCLFSNQPTGLKP*LH*LLVWALGWFCTS*GNQIYHIQETIFTSSHTEGITGTARRV*PIVALGSHSQAQEYSVSLKI  7475

Range 4: 7518 to 7883 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
230.2 bits(496) 0.0 99/122(81%) 0/122(0%) Plus/Plus
Query      987  MHYLFGILVLVGVAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTVREVLGGLKALGISHTTEEIDYRC*IG*MASQIGKLPGESNEAFEARLKSLELARAQKQLKGQTHP  1352
                MHYLFGILVLVGVAIAIQILAHVD+SSG+HQGCFIRATGESILIENCGPSEALA+TV+EVLGGLKALG+S   +EIDY C*  *MASQ+GKLPGESNEA+EARLK+LELAR QK  +    P
Subject   7518  MHYLFGILVLVGVAIAIQILAHVDSSSGNHQGCFIRATGESILIENCGPSEALAATVKEVLGGLKALGVSQKVDEIDYSC*DS*MASQVGKLPGESNEAYEARLKALELARTQKAPEVSNQP  7883

Range 5: 6540 to 6626 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.0 bits(164) 0.0 28/29(97%) 0/29(0%) Plus/Plus
Query        9  CLGLKCLAWCEYYE*FSQSFVCV*ICWCV  95
                CLGLKCLAWCEYYE* SQSFVCV*ICWCV
Subject   6540  CLGLKCLAWCEYYE*LSQSFVCV*ICWCV  6626

Range 6: 6539 to 7729 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
825.4 bits(1795) 0.0 354/397(89%) 0/397(0%) Plus/Plus
Query        8  LFRP*VFGMVRVL*II*SKLCLRLNLLVCFVCLNFQLLFTVFQVAVKVA**GSLFLKTRLLWPLQQVCQTVQI*QEGTSSPTLQGVQCKGK*TYLMSTCLSLILLALMCCSQTLTRMSAFQERHTS*KPECVGLVPTSASTFNLLALMFVVMGWIKLL*GRHLNWRLRGSSFALERRP*I*QLHTILTSSCPARCGVQHLTL*RY*SPGIQLQKISIGSTLQPQGIEVN***CSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGHYRDGTKSVTYCGPRQSFPSSGIFGQSENFVPLILVVTLVAFIHALSLWNSGPSRSCNCHPNPCSCRQQ*WQSPRLLY*GHWRVYFD*KLWPKRGPCINSEGGIGRFEGFRN*P  1198
                LFRP*VFGMV VL*I *SKLCLRLNLLVCFV LNFQLLFTVFQV V+VA**GS FLKTRLLWP QQVCQTVQI* EGTSSPTLQGVQCKGK*TYLMSTCLSLILLALMCCSQTLTR SAFQERHT *KP+ VGLVPT ASTFNLLALMFVVMGWIKLL*GRHLNWRLRG SFALERRP* *QLHTILTSSCPA+CGVQHLTL*RY*SPGIQLQKISIGSTLQPQGIEVN***CSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGHYRDGTKS+TYCGPRQSFPSSGIFGQSENF+PLILVVTLVAFIHALSLWNSGPSRSCNCHPNPC+CRQQ*WQ  RL +  H  +  +*+LW +RGP   S+ G+GR +GFR *P
Subject   6539  LFRP*VFGMV*VL*IT*SKLCLRLNLLVCFVYLNFQLLFTVFQVVVRVA**GSSFLKTRLLWPSQQVCQTVQI**EGTSSPTLQGVQCKGK*TYLMSTCLSLILLALMCCSQTLTRTSAFQERHTL*KPKPVGLVPTPASTFNLLALMFVVMGWIKLL*GRHLNWRLRGFSFALERRP*T*QLHTILTSSCPAKCGVQHLTL*RY*SPGIQLQKISIGSTLQPQGIEVN***CSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGHYRDGTKSITYCGPRQSFPSSGIFGQSENFIPLILVVTLVAFIHALSLWNSGPSRSCNCHPNPCTCRQQ*WQPSRLFHKSHRGINTN*ELWAERGPSCYSQRGVGRSKGFRG*P  7729

Range 7: 6538 to 7575 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
781.4 bits(1699) 0.0 330/346(95%) 0/346(0%) Plus/Plus
Query        7  VV*ALSVWHGASIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDEAFVAFTAGVPDSPNLTGRYIKPYAPGCAVQGKINILDEYLSVSDTSGFDVLFSDPYQNVSIPREAHFIKTRMCRFGTNICKYFQSFGFDVCSDGVDKVVVGSPFELEVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFDVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*NAFSATCQLG*DHNPINHWFGHWVGSALLKEIKSTIFRRQYSPVPTRRALQGRHEECNLLWP*AVIPKLRNIRSV*KFRTSNIGRDSGRFYTCIISLEFWS**ELQLPSKS  1044
                +V*ALSVWHG SIMNNLVKALSAFEFVGVF VLKFPVVVHSVPGSGKSSLIRELISEDEAFVAFTAGVPDSPNL GRYIKPYAPGCAVQGKINILDEYLSVSDTSGFDVLFSDPYQNVSIPREAHFIKT+ CRFGTN CKY QSFGF+VCSDGVDKVVVGSPFELEVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFDVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*NAFSAT QLG*+HN IN+WFGHWVGSALLKEIKSTIFRRQYSPVPTRRALQGRHEE NLLWP*AVIPKLRNIRSV*KF TSNIGRDSG FYTCIISLEFWS**ELQLPSKS
Subject   6538  IV*ALSVWHGVSIMNNLVKALSAFEFVGVFRVLKFPVVVHSVPGSGKSSLIRELISEDEAFVAFTAGVPDSPNLIGRYIKPYAPGCAVQGKINILDEYLSVSDTSGFDVLFSDPYQNVSIPREAHFIKTKTCRFGTNTCKYLQSFGFNVCSDGVDKVVVGSPFELEVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFDVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*NAFSATSQLG*NHNSINYWFGHWVGSALLKEIKSTIFRRQYSPVPTRRALQGRHEEYNLLWP*AVIPKLRNIRSV*KFHTSNIGRDSGGFYTCIISLEFWS**ELQLPSKS  7575

Range 8: 7627 to 7728 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.4 bits(60) 0.0 18/34(53%) 0/34(0%) Plus/Plus
Query     1096  PLESLF*LKIVAQARPLHQQ*GRYWEV*RL*ELA  1197
                P  + +*L+IV +ARP   Q  R W V*RL* LA
Subject   7627  PPGNQY*LRIVGRARP*LLQSKRCWAV*RL*GLA  7728

Range 9: 6655 to 7731 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
739.2 bits(1607) 0.0 315/359(88%) 0/359(0%) Minus/Minus
Query      124  YG*FLKPSNLPIPPSLLMQGPRLGHNFQSK*TLQWP**SNLGDCHYCCLHEXXXXXXXXXXXGPEFQRDNACIKATRVTTNIRGTKFSD*PNIPELGNDCLGPQ*VTLFVPSL*CPPCGNW*ILSPEYGRFDFLKKCRTNPMPKPMVNGVMVLAQLAGC*KGILLHYYQFTSMPCGCNVEPMLIF*SWIPGLQ*RHNVKC*TPHLAGQLEVRIVCNC*IYGLLSKANEDPLNLQFKWRPYNNFIHPITTNIKAKRLKVLADVGTKPTHSGFYEVCLSWNADILVRV*EQHIKARSIRDRQVLIKYVYFPLHCTPWSVGLDVPSCQIWTVWHTCCKGHKSLVFRNKLPY*ATFTATWNTV  1200
                +G* LKP + P P  L   GPR  HN Q     +W  *++L  CHYCCLH QGFGWQLQLLLGPEFQRDNACIKATRVTTNIRG KFSD*PNIPELGNDCLGPQ*V LFVPSL*CPPCGNW*ILSPEYGRFDFLKKCRTNPMPKP+VNGVMVLAQLAGC*KGILLHYYQFTSMPCGCNVEPMLIF*SWIPGLQ*RHNVKC*TPH AGQLEVRIVCNC*+YGLLSKANE+PLNLQFKWRPYNNFIHPITTNIKAKRLKVLA VGTKPT  GFY+VCLSWNAD+LVRV*EQHIKARSIRDRQVLIKYVYFPLHCTPWSVGLDVPS  IWTVWHTCC+GHKSLVFRN+LPY*AT T TWNTV
Subject   6655  FG*PLKPLDRPTPL*L*QLGPRSAHNSQLVLIPRWLL*NSLDGCHYCCLHVQGFGWQLQLLLGPEFQRDNACIKATRVTTNIRGMKFSD*PNIPELGNDCLGPQ*VILFVPSL*CPPCGNW*ILSPEYGRFDFLKKCRTNPMPKPIVNGVMVLAQLAGC*KGILLHYYQFTSMPCGCNVEPMLIF*SWIPGLQ*RHNVKC*TPHFAGQLEVRIVCNC*VYGLLSKANENPLNLQFKWRPYNNFIHPITTNIKAKRLKVLAGVGTKPTGFGFYKVCLSWNADVLVRV*EQHIKARSIRDRQVLIKYVYFPLHCTPWSVGLDVPSY*IWTVWHTCCEGHKSLVFRNELPY*ATLTTTWNTV  7731

Range 10: 6538 to 6606 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.8 bits(109) 0.0 21/23(91%) 0/23(0%) Minus/Minus
Query        7  RRQSFD*IIHNTRTMPNT*GLNN  75
                RRQSFD*+IHNT TMPNT*GLNN
Subject   6538  RRQSFD*VIHNTHTMPNT*GLNN  6606

Range 11: 6714 to 7808 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
656.3 bits(1426) 0.0 310/365(85%) 0/365(0%) Minus/Minus
Query      183  I*FAGEXXXXXXXXXXXXTIINFFSSMANS*SLQTSQYLPHC*CKGLAWATIFNQNRLSSGPNKATLVTATTVVYMSKDLDGNCNSY*DQNSKEIMHV*KRPESRPILEVRNFQTDRIFLSLGMTA*GHNRLHSSCRPCNALRVGTGEYCLLNMVDLISLRSAEPTQCPNQWLMGLWS*PSWQVAEKAFYCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTSNVEPRTSQGNLKSELCATARSTASFPKQMRTPSTSSSNGDXXXXXXXXXXXXSKPKD*KYLQMLVPNLHILVFMKCASLGMLTFW*GSENSTSKPEVSETDKYSSSMFIFPCTAHPGA*GLMYLPVRFGLSGTPAVKATKA  1277
                I*FA + +NLT H T  TT+INF + +AN *SL T+Q+L  C   GLA  TI N      G  +  L+ ATT VYM KDLDGNCNSY*DQNSKEIMHV*K PESRPILEV NFQTDRIFLSLGMTA*GHNRL+SSCRPCNALRVGTGEYCLLNMVDLISLRSAEPTQCPNQ LM LW *PSW VAEKAFYCIII+LLRCLVAAT*NQCLSSEVGSLDFNNVTTSNVEPRTSQGNLKSELCATARSTASFPKQMRTPSTSSSNGDPTTTLSTPSLQT KPKD*+YLQ+LVPNL +LVF+KCASLGMLTFW*GSENSTSKPEVSETDKYSSSMFIFPCTAHPGA*GLMYLP+RFGLSGTPAVKATKA
Subject   6714  I*FARQFSNLTCHSTVSTTVINFINLLANP*SL*TAQHLFDCSS*GLARPTILN*Y*FPGGSYETALMVATTAVYMCKDLDGNCNSY*DQNSKEIMHV*KPPESRPILEV*NFQTDRIFLSLGMTA*GHNRLYSSCRPCNALRVGTGEYCLLNMVDLISLRSAEPTQCPNQ*LMELWF*PSWLVAEKAFYCIIINLLRCLVAAT*NQCLSSEVGSLDFNNVTTSNVEPRTSQGNLKSELCATARSTASFPKQMRTPSTSSSNGDPTTTLSTPSLQTLKPKD*RYLQVLVPNLQVLVFIKCASLGMLTFW*GSENSTSKPEVSETDKYSSSMFIFPCTAHPGA*GLMYLPIRFGLSGTPAVKATKA  7808

Range 12: 6539 to 6595 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.1 bits(92) 0.0 18/19(95%) 0/19(0%) Minus/Minus
Query        8  L*LNYS*YSHHAKHLRPKQ  64
                L*L+YS*YSHHAKHLRPKQ
Subject   6539  L*LSYS*YSHHAKHLRPKQ  6595

Grapevine rupestris stem pitting associated virus isolate SK704 A, complete genome

Sequence ID: KX274274.1 Length: 8725 Number of Matches: 13

Range 1: 6536 to 7729 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
754.8 bits(1641) 0.0 328/398(82%) 0/398(0%) Plus/Plus
Query        5  ALFRP*VFGMVRVL*II*SKLCLRLNLLVCFVCLNFQLLFTVFQVAVKVA**GSLFLKTRLLWPLQQVCQTVQI*QEGTSSPTLQGVQCKGK*TYLMSTCLSLILLALMCCSQTLTRMSAFQERHTS*KPECVGLVPTSASTFNLLALMFVVMGWIKLL*GRHLNWRLRGSSFALERRP*I*QLHTILTSSCPARCGVQHLTL*RY*SPGIQLQKISIGSTLQPQGIEVN***CSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGHYRDGTKSVTYCGPRQSFPSSGIFGQSENFVPLILVVTLVAFIHALSLWNSGPSRSCNCHPNPCSCRQQ*WQSPRLLY*GHWRVYFD*KLWPKRGPCINSEGGIGRFEGFRN*P  1198
                +LFRP*VFG+V VL*I *S+LC  LNLLVC  CLNFQLLF VFQVAV+VA**GS FLKT L W LQQVCQTVQI*QEGTSSPTLQGVQCKG+*TYLMSTCLSLI + LMCCSQTLTR SAFQ RHTS*+P+  GLV T A T NLLA   +V+ W +LL*GRHLNW LR  SFALERRP*I*QL TI TSSCP RCGVQHLTL*RY*S G QLQKISIGSTLQ QGIE N***CSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGHYRDGTKS+TYCGPRQSFPSSGIFGQSENFVPLILVVTLVAFIHALSLWNSGP RSCNCHPNPC+CRQQ*WQ  RL +  H  V  D*+LW KRGP  +S  G+GR EGFR *P
Subject   6536  SLFRP*VFGVV*VL*IT*SRLCQHLNLLVCSACLNFQLLFIVFQVAVRVA**GSSFLKTSLSWLLQQVCQTVQI*QEGTSSPTLQGVQCKGR*TYLMSTCLSLIFMVLMCCSQTLTRTSAFQGRHTS*RPKLAGLVLTPAGTSNLLASKSIVIEWTQLL*GRHLNWMLREFSFALERRP*I*QLRTIPTSSCPVRCGVQHLTL*RY*SLGTQLQKISIGSTLQQQGIEAN***CSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGHYRDGTKSITYCGPRQSFPSSGIFGQSENFVPLILVVTLVAFIHALSLWNSGPGRSCNCHPNPCTCRQQ*WQPSRLFHKSHRGVNTD*ELWAKRGPSCHS*RGVGRSEGFRG*P  7729

Range 2: 6641 to 7858 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
698.9 bits(1519) 0.0 322/406(79%) 0/406(0%) Minus/Minus
Query      110  F*ALANSSDLSRASNASFDSPGSLPI*LAI*PI*QR*SISSVVWLIPKAFKPPNTSLTVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIATPTRTRIPKR*CMYKSDQSHDQY*RYEIFRLTEYS*AWE*LPRATIGYTLRAVPVMPSVWELVNIVS*IW*I*FP*EVQNQPNAQTNG*WGYGLSPVGRLLKRHFTALLSVYFDALWLQRRTNAYLLKLDPWTSITSQRQMLNPAPRRAT*SQNCVQLLDLRPPFQSK*GPPQPPVQMATLQQLYPPHHYKHQSQKIESTCRCWYQTYTFWFL*SVPLLEC*HSGKGLRTAHQSQKYQRQTSTHQVCLFSLALHTLERRA*CTFLSDLDCLAHLL*RPQKPRLQK*APLLGYFYRYLEHCEQQLE  1327
                F*ALANS  LS AS AS DSPG+ P *LAI*   Q *SISS  WL PKAF+PPNTSLTV ARASLGPQFSI IDSPVAL+KQP  LPLLLST ARIWMAIATPTRTRIPKR*CMY+SDQS+DQY*R EIF LT+Y * WE*LPR TIGYTL AVPVMP VW+LVNIV+*IW I*   EV NQ NAQ NG*W Y LSPVGRLL+RH TALLSV FDAL LQRRTNAYLLKL P TSITSQR MLNPAP RAT*S+NC QLLDLRPPFQSK*  PQ PVQMATL QL P +HY+ +SQKI  TCRC +QT  FW L*SVP LE * SGKGLRTAHQ+ +YQRQTSTHQVCL SLALHTLE RA*CTFL DLDCLAHLL*+P+K RLQK*APLLGY YRYLEH EQQLE
Subject   6641  F*ALANSKALSLASYASLDSPGNFPT*LAI*LFQQL*SISSTFWLTPKAFRPPNTSLTVAARASLGPQFSISIDSPVALMKQP*WLPLLLSTCARIWMAIATPTRTRIPKR*CMYESDQSYDQY*RNEIFGLTKYP*TWE*LPRTTIGYTLCAVPVMPPVWKLVNIVT*IWQI*LSQEV*NQSNAQANG*WSYSLSPVGRLLERHLTALLSVCFDALLLQRRTNAYLLKLGP*TSITSQR*MLNPAPHRAT*SRNCAQLLDLRPPFQSK*ELPQHPVQMATL*QLRPLYHYRFRSQKIGGTCRC*HQTCKFWSL*SVPPLER*CSGKGLRTAHQNHEYQRQTSTHQVCLSSLALHTLESRA*CTFLLDLDCLAHLL*KPRKTRLQK*APLLGYSYRYLEHYEQQLE  7858

Range 3: 6540 to 6614 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.6 bits(104) 0.0 23/25(92%) 0/25(0%) Minus/Minus
Query        9  NSNADKALTKLFIILAPCQTLKA*T  83
                NSNADKALTKLFIIL P QTLKA*T
Subject   6540  NSNADKALTKLFIILTPRQTLKA*T  6614

Range 4: 6538 to 7575 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
710.8 bits(1545) 0.0 294/346(85%) 0/346(0%) Plus/Plus
Query        7  VV*ALSVWHGASIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDEAFVAFTAGVPDSPNLTGRYIKPYAPGCAVQGKINILDEYLSVSDTSGFDVLFSDPYQNVSIPREAHFIKTRMCRFGTNICKYFQSFGFDVCSDGVDKVVVGSPFELEVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFDVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*NAFSATCQLG*DHNPINHWFGHWVGSALLKEIKSTIFRRQYSPVPTRRALQGRHEECNLLWP*AVIPKLRNIRSV*KFRTSNIGRDSGRFYTCIISLEFWS**ELQLPSKS  1044
                +V*ALSVW G SIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDE+FVAFTAGVPDSPNLTGRYIKPY+PGCAVQGKINILDEYLSVSD  GFDVLFSDPYQN+S+PREAHFIKT+ CRFG N C+Y QSFGF++ SD VD VV+GSPFEL+VEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTF+VVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*+AF ATCQLG*D+N INHW GHW+GS LL+++K  IFR QYSPV TR ALQGRH+E NLLW *A+IPK R+I SV KFR+ N GR+SGRF+TCIISLEFWS *ELQLPSKS
Subject   6538  IV*ALSVWRGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNISVPREAHFIKTKTCRFGANTCRYLQSFGFEIYSDRVDAVVIGSPFELDVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFNVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*DAFPATCQLG*DYNSINHWLGHWIGSTLLEKVKFAIFR*QYSPVSTRGALQGRHKEYNLLWS*AIIPKFRDIWSVRKFRSFNTGRNSGRFHTCIISLEFWSW*ELQLPSKS  7575

Range 5: 7627 to 7728 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.1 bits(68) 0.0 20/34(59%) 0/34(0%) Plus/Plus
Query     1096  PLESLF*LKIVAQARPLHQQ*GRYWEV*RL*ELA  1197
                P  S +*L+IV QARP   Q  R W V*RL* LA
Subject   7627  PPGSQY*LRIVGQARP*LPQLKRCWAV*RL*GLA  7728

Range 6: 6666 to 7475 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
455.6 bits(988) 0.0 214/270(79%) 0/270(0%) Plus/Plus
Query      135  R*R*K*PNKGAYF*RRGFCGLYSRCARQSKSDRKVHQALRSRVCSARENKHT**VLVCL*YFWL*CAVLRPLPECQHSKRGTLHKNQNV*VWYQHLQVLSIFWL*CL**WGG*SCCRVAI*TGG*GGPHLLWKGGRRSSSCTQF*LQVALRGAGFNI*RCDVIEVQGSNFRR*ALVLRCSHKASK*TDNNAVKCLFSNLPTGLRP*PH*PLVWALGWFCTS*GNQIYHIQETIFTSSHTEGITGTARRV*PIVALGSHSQAQEYSVSLKI  944
                R*R*+*PNKGA+F*RR F G YSRCARQSKS+RKVHQAL SRVCSARE+KHT**VLVCL*Y W *CAVLRPLPE Q SK GTLHK+QN+ VW  HLQV  IFWL  L**  G SC RVAI*TG *G  HLLWKGGRRSSSC QF LQVAL GAGFNI*RCDVIEV G NFRR*ALVLRCS+KASK TDNNAV+CL SNLPTGLR * H*PL WAL WF TS* +QI HIQ TIFTS HT GITGTA+RV*PIV LG+HSQ Q Y VS KI
Subject   6666  R*R*E*PNKGAHF*RRVFRGFYSRCARQSKSNRKVHQALLSRVCSAREDKHT**VLVCL*YSWF*CAVLRPLPEHQRSKGGTLHKDQNLQVWC*HLQVPPIFWLRNL***SGRSCYRVAI*TGC*GSSHLLWKGGRRSSSCAQFRLQVAL*GAGFNI*RCDVIEV*GPNFRR*ALVLRCSNKASKQTDNNAVRCLSSNLPTGLRL*LH*PLAWALDWFYTS*ESQICHIQVTIFTSFHTGGITGTAQRV*PIVVLGNHSQVQGYLVSPKI  7475

Range 7: 7518 to 7883 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
232.0 bits(500) 0.0 100/122(82%) 0/122(0%) Plus/Plus
Query      987  MHYLFGILVLVGVAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTVREVLGGLKALGISHTTEEIDYRC*IG*MASQIGKLPGESNEAFEARLKSLELARAQKQLKGQTHP  1352
                MHYLFGILVLVGVAIAIQILAHVD+SSG+HQGCFIRATGESILIENCGPSEALA+TV+EVLGGLKALG+S   +EIDY C*  *MASQ+GKLPGESNEA+EARLK+LELARAQK  +    P
Subject   7518  MHYLFGILVLVGVAIAIQILAHVDSSSGNHQGCFIRATGESILIENCGPSEALAATVKEVLGGLKALGVSQKVDEIDYSC*KS*MASQVGKLPGESNEAYEARLKALELARAQKAPEVSNQP  7883

Range 8: 6540 to 6629 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.0 bits(153) 0.0 26/30(87%) 0/30(0%) Plus/Plus
Query        9  CLGLKCLAWCEYYE*FSQSFVCV*ICWCVL  98
                CLGLKCLAWCEYYE* SQ FV +*ICWCVL
Subject   6540  CLGLKCLAWCEYYE*LSQGFVSI*ICWCVL  6629

Range 9: 6655 to 7731 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
682.0 bits(1482) 0.0 289/359(81%) 0/359(0%) Minus/Minus
Query      124  YG*FLKPSNLPIPPSLLMQGPRLGHNFQSK*TLQWP**SNLGDCHYCCLHEXXXXXXXXXXXGPEFQRDNACIKATRVTTNIRGTKFSD*PNIPELGNDCLGPQ*VTLFVPSL*CPPCGNW*ILSPEYGRFDFLKKCRTNPMPKPMVNGVMVLAQLAGC*KGILLHYYQFTSMPCGCNVEPMLIF*SWIPGLQ*RHNVKC*TPHLAGQLEVRIVCNC*IYGLLSKANEDPLNLQFKWRPYNNFIHPITTNIKAKRLKVLADVGTKPTHSGFYEVCLSWNADILVRV*EQHIKARSIRDRQVLIKYVYFPLHCTPWSVGLDVPSCQIWTVWHTCCKGHKSLVFRNKLPY*ATFTATWNTV  1200
                +G* LKPS+ P P  L   GPRL HN QS  T +W  *++L  CHYCCLH QGFGWQLQLL GPEFQRDNAC+KATRVTT+I+GTKFSD*PNIPELGNDCLGPQ*V LFVPSL*CPPCGNW*ILSPEYG+FDFLKKCRTNPMPKPMVNGV+VLAQLAGC KGILLHYYQF SMPC CNVEPMLIF*SW+P LQ*RHNVKC*TPHL GQLEV IV NC*IYGLLSKANE+ LN+QFKWRPYNN +H IT + +AKRL+V A V TKP   G YEVCL WNAD+LVRV*EQHIK  +IRDRQVLIKYVY PLHCTPW VGLDVPSC IWTVWHTCCK H+ LVFRN+LPY*AT TATWNT+
Subject   6655  FG*PLKPSDRPTPL*LWQLGPRLAHNSQSVLTPRWLL*NSLDGCHYCCLHVQGFGWQLQLLPGPEFQRDNACMKATRVTTSIKGTKFSD*PNIPELGNDCLGPQ*VILFVPSL*CPPCGNW*ILSPEYGKFDFLKKCRTNPMPKPMVNGVIVLAQLAGCWKGILLHYYQFASMPCCCNVEPMLIF*SWVPRLQ*RHNVKC*TPHLTGQLEVGIVRNC*IYGLLSKANENSLNIQFKWRPYNNCVHSITIDFEAKRLEVPAGVSTKPASFGLYEVCLPWNADVLVRV*EQHIKTMNIRDRQVLIKYVYLPLHCTPWRVGLDVPSC*IWTVWHTCCKSHERLVFRNELPY*ATLTATWNTM  7731

Range 10: 6539 to 6592 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
43.2 bits(88) 0.0 17/18(94%) 0/18(0%) Minus/Minus
Query        8  *LNYS*YSHHAKHLRPKQ  61
                *L+YS*YSHHAKHLRPKQ
Subject   6539  *LSYS*YSHHAKHLRPKQ  6592

Range 11: 7017 to 7829 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
434.1 bits(941) 0.0 202/271(75%) 0/271(0%) Minus/Minus
Query      486  KPGFKRLI*FAGEXXXXXXXXXXXXTIINFFSSMANS*SLQTSQYLPHC*CKGLAWATIFNQNRLSSGPNKATLVTATTVVYMSKDLDGNCNSY*DQNSKEIMHV*KRPESRPILEVRNFQTDRIFLSLGMTA*GHNRLHSSCRPCNALRVGTGEYCLLNMVDLISLRSAEPTQCPNQWLMGLWS*PSWQVAEKAFYCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTSNVEPRTSQGNLKSELCATARSTASFPKQMRTPSTSSSNGD  1298
                KPGF   I  A +L+ LT HLT  TT+INF + +AN *SLQT+Q+L +C   GLAW TI NQ  L  G  +  L+ ATT VYM KDLDGNCNSY DQNSKEIMHV*KRPE RP+L+ RNF+TD+I L+LGM A* HNRL+S CRPCNA RV TGEYC LNM +L   RS EP QCP+QWLM L S*PSWQVA KA YCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTT NVEPRTSQGNLKSELCATARSTASFPKQMRTPSTSSSNGD
Subject   7017  KPGFICFIRLARQLSYLTCHLTLSTTVINFINLLANP*SLQTAQHLFNCGS*GLAWPTILNQY*LPGGSYETALMVATTAVYMCKDLDGNCNSYQDQNSKEIMHV*KRPELRPVLKERNFRTDQISLNLGMIA*DHNRLYSLCRPCNAPRVETGEYCHLNMANLTFSRSVEPIQCPSQWLMEL*S*PSWQVAGKASYCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTLNVEPRTSQGNLKSELCATARSTASFPKQMRTPSTSSSNGD  7829

Range 12: 6717 to 6977 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
184.4 bits(396) 0.0 76/87(87%) 0/87(0%) Minus/Minus
Query      186  KPKD*KYLQMLVPNLHILVFMKCASLGMLTFW*GSENSTSKPEVSETDKYSSSMFIFPCTAHPGA*GLMYLPVRFGLSGTPAVKATK  446
                KPKD +YLQ+L PNL +LVFMKCASLG L FW*GSENSTSKP +SETDKYSSSMFIFPCTAHPG *GLMYLPVRFGLSGTPAVKATK
Subject   6717  KPKDWRYLQVLAPNLQVLVFMKCASLGTLMFW*GSENSTSKP*ISETDKYSSSMFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATK  6977

Range 13: 6538 to 6600 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
42.8 bits(87) 0.0 17/21(81%) 0/21(0%) Minus/Minus
Query        7  QSFD*IIHNTRTMPNT*GLNN  69
                QS D*+IHNT T PNT*GLNN
Subject   6538  QSLD*VIHNTHTTPNT*GLNN  6600

Nucleotide Sequence (658 letters)

Query ID:ds2016-132_4
Query definition:No definition line
Query length:951
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 16 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
66
132
198
264
330
396
462
528
594
658

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate TEMP BR replicase, 24.4 kDa protein, 12.8 kDa protein, 8.4 kDa protein, and 28 kDa protein genes, complete cds

Sequence ID: KX925556.1 Length: 8700 Number of Matches: 6

Range 1: 4016 to 4672 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
520.2 bits(1129) 0.0 217/219(99%) 0/219(0%) Minus/Plus
Query        2  TGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFL  658
                TGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDD CKVAKAGKSKKEGWDVVTFEVFLRKVS LKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFL
Subject   4016  TGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKVSSLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFL  4672

Range 2: 4018 to 4671 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
458.8 bits(995) 0.0 210/218(96%) 0/218(0%) Plus/Minus
Query        3  RKSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTKRLLSMLYLYVFPXXXXXXXXXXAPKIARSFCESYVLWHGSPASEMKASLRMTSKHKSIYPGGNN*TSSKITQ*PAFKPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLGFISAVDIPESQGFASLNFSSLMTP  656
                RKSCILWKIA*SAKAAVIEPFLK*HG+LDSNIGFTKRLLSMLYLYVFPSSSLS+SLCSAP+IARSFCESYVLWHGSPASEMKASLRMTSKH+SIYPGGN+*TSSKITQ*PAFK ETFLRKTSKVTTSHPSFFDLPALATLQ SSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLG ISAVDIPESQGFASLNFSSLMTP
Subject   4018  RKSCILWKIA*SAKAAVIEPFLK*HGNLDSNIGFTKRLLSMLYLYVFPSSSLSISLCSAPRIARSFCESYVLWHGSPASEMKASLRMTSKHRSIYPGGNS*TSSKITQ*PAFKLETFLRKTSKVTTSHPSFFDLPALATLQLSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLGLISAVDIPESQGFASLNFSSLMTP  4671

Range 3: 4018 to 4671 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
457.0 bits(991) 0.0 192/218(88%) 0/218(0%) Minus/Plus
Query        3  WCHK**KVQ*CKTLAFWYINCGYKAKRANCRAWHIWGWKEFLV*EFHEEI*GKICNFCFP*TSLGKFNQK*S*NG*WLQSCQSRQIKEGRVGCSDL*SFP*KSFWFEGWSLCDFR*GSVVSPWIYRFVFTCHTQ*CFHFTCW*SMPEHI*FTEGSSNFGS*AE*HTQTA*RKDI*VQHRKQTFCEPNV*I*TTMSLQKRFNDCSLC*LCNLPQYA*LP  656
                WCHK**KVQ*CKTLAFWYINC Y AKRANCRAWHIWGWKEFLV*EFHEE+* KICNFCFP TSL KFNQK*S*NG* LQSCQSRQIKEGRVGC D * FP*KSF FEG SLCDFR*GS VSPWIYR +FTCHTQ*CFH TCW*SMPEHI*FT+GS N GS*AE*+TQTA*RKD+ VQHRKQ FCEPNV*I* TMSLQKRFNDC LC*LCNLP YA*LP
Subject   4018  WCHK**KVQ*CKTLAFWYINCRY*AKRANCRAWHIWGWKEFLV*EFHEEV*RKICNFCFPETSLSKFNQK*S*NG**LQSCQSRQIKEGRVGCGDF*GFP*KSF*FEGRSLCDFR*GSAVSPWIYRSMFTCHTQ*CFHLTCW*SMPEHI*FTKGSCNSGS*AE*YTQTA*RKDVQVQHRKQAFCEPNV*I*ITMSLQKRFNDCCLC*LCNLP*YA*LP  4671

Range 4: 4016 to 4672 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
446.9 bits(969) 0.0 201/219(92%) 0/219(0%) Plus/Minus
Query        2  EEVMHIVEDCIISKGCSH*TFFEVTW*SRFKHWVHKTSAFYVVPICLSFKQSEYVTLLSSQNCSXXXXXXXXXXWITSK*NESITAYDK*TQIDISRGKQLNLIENHTMTSLQTRNFSKENFKGHYIPPFLL*FACFGNFAAIIHFKIIFD*ICQGSSRGNKSYKFSLRSLHETLIQETLSSPKCAKHDS*LSWLYIRS*YTRKPGFCITELFITYDTS  658
                EEVMHI+EDCIISKG SH*TFFEVTW*SRFKHWVHKT AFYVVP+ LSFKQSEY+TLLSSQNC+ILL*IICALAWITSK*+ESITAYDK*T IDISRGKQLNLIENHTMT LQTRNFSKEN K H+IPPFLL*FACFGNFAAIIHFKIIFD*IC GSSRGNKSYKFS R LHETLIQETLSSPKCAKHDS*LSWL I S*YTRKPGFCITELFITYDTS
Subject   4016  EEVMHIMEDCIISKGSSH*TFFEVTW*SRFKHWVHKTPAFYVVPVRLSFKQSEYITLLSSQNCTILL*IICALAWITSK*DESITAYDK*T*IDISRGKQLNLIENHTMTGLQTRNFSKENLKSHHIPPFLL*FACFGNFAAIIHFKIIFD*IC*GSSRGNKSYKFSFRPLHETLIQETLSSPKCAKHDS*LSWLNICS*YTRKPGFCITELFITYDTS  4672

Range 5: 4017 to 4673 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
431.3 bits(935) 0.0 198/219(90%) 0/219(0%) Minus/Plus
Query        1  LVS*VMKSSVMQNPGFLVYQLRI*SQES*LSCLAHLGLERVSCIRVS*RDLRENL*LLFPLDEPWQIQSKMILKWMMAAKLPKQANQRRKGGM**PLKFSLEKFLV*RLVIV*FSMRFSCFPLDISICVYLSYAVMLSFHLLVIHARAHMIHRRIEQFWELSRVTYSDCLKERHIGTT*KADVL*TQCLNLDYHVTSKKVQ*LQPLLIMQSSTICMTSS  657
                LVS*VMKSSVMQNPGFLVYQL+I SQES*LSCLAHLGLERVSCIRVS*R L+ENL*LLFP DEP QIQSKMILKWM+AAKLPKQANQRRKGGM * L+FSLEKFLV*R VIV*FSMRFSCFPLDISI VYLSYAVMLS HLLVIHARAHMIH+RI QFWELSRV YSDCLKER  GTT*KA VL*TQCLNLDYHVTSKKVQ*L PLLIMQSS ICMTSS
Subject   4017  LVS*VMKSSVMQNPGFLVYQLQILSQES*LSCLAHLGLERVSCIRVS*RGLKENL*LLFPRDEP*QIQSKMILKWMIAAKLPKQANQRRKGGMW*LLRFSLEKFLV*RPVIV*FSMRFSCFPLDISIYVYLSYAVMLSSHLLVIHARAHMIHKRIVQFWELSRVIYSDCLKERRTGTT*KAGVL*TQCLNLDYHVTSKKVQ*LLPLLIMQSSIICMTSS  4673

Range 6: 4053 to 4673 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
421.7 bits(914) 0.0 181/207(87%) 0/207(0%) Plus/Minus
Query        1  GGSHAYCGRLHNQQRLQSLNLF*SDMVV*IQTLGSQNVCFLCCTYMSFLQAV*VCHSAQLPKLLDPSVNHMCSGMDHQQVK*KHHCV*QVNTNRYIQGETTEPHRKSHNDQPSNQKLF*GKLQRSLHPTLPSLICLLWQLCSHHPFQDHF*LNLPRLV*GKQKLQIFPQISS*NSYTRNSFQPQMCQARQLALLALYPQLIYQKARV  621
                GGSHAY GRLHNQQR QSLNLF*SDMV+*IQTLGSQN CFLCCT  SFLQAV*V HSAQLP+L DP VNHMCSGMDHQQV+*KHHCV*QVN +RYIQGET EPHRKSHND+PSN KLF*GK Q+S HPTLPSLICLLWQLCS+HPFQDHF*LNL RLV GKQKLQIF Q SS*NSYTRNSFQPQMCQARQLALLA Y QLIYQKARV
Subject   4053  GGSHAYYGRLHNQQRQQSLNLF*SDMVI*IQTLGSQNACFLCCTCTSFLQAV*VYHSAQLPELHDPFVNHMCSGMDHQQVR*KHHCV*QVNIDRYIQGETAEPHRKSHNDRPSN*KLF*GKPQKSPHPTLPSLICLLWQLCSYHPFQDHF*LNLLRLVSGKQKLQIFLQTSS*NSYTRNSFQPQMCQARQLALLA*YLQLIYQKARV  4673

Grapevine rupestris stem pitting associated virus complete genome, isolate PG, genomic RNA

Sequence ID: HE591388.1 Length: 8725 Number of Matches: 6

Range 1: 4027 to 4683 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
519.3 bits(1127) 0.0 215/219(98%) 0/219(0%) Minus/Plus
Query        2  TGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFL  658
                TGVISDEKFSDAKPWLSGIST DIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDD CKVAKAGKSKKEGWDVVTFEVFLRKV+GLKAGHCVIFDEVQLFPPGYIDLCLL+IRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFL
Subject   4027  TGVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQLFPPGYIDLCLLIIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFL  4683

Range 2: 4029 to 4682 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
428.1 bits(928) 0.0 199/218(91%) 0/218(0%) Plus/Minus
Query        3  RKSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTKRLLSMLYLYVFPXXXXXXXXXXAPKIARSFCESYVLWHGSPASEMKASLRMTSKHKSIYPGGNN*TSSKITQ*PAFKPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLGFISAVDIPESQGFASLNFSSLMTP  656
                RKSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFT  LLSMLYLYV PSSSLSMSLCSAPKIARSFCESYVL HGSPASEMKASLR+ SKH+S+YPGGNN TSSKITQ PAF P TFLRKTSKVTTSHPSFFDLPALATLQ SSISRSFLIEFAKARLGETKVTN PSDLF+KLLYKKLFPAPNVPSTTV+SLG IS VDIPESQGFASLNFSSL+TP
Subject   4029  RKSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTNLLLSMLYLYVLPSSSLSMSLCSAPKIARSFCESYVL*HGSPASEMKASLRIMSKHRSMYPGGNNWTSSKITQWPAFNPATFLRKTSKVTTSHPSFFDLPALATLQLSSISRSFLIEFAKARLGETKVTNLPSDLFIKLLYKKLFPAPNVPSTTVNSLGLISVVDIPESQGFASLNFSSLITP  4682

Range 3: 4027 to 4683 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
340.1 bits(736) 0.0 153/219(70%) 0/219(0%) Plus/Minus
Query        2  EEVMHIVEDCIISKGCSH*TFFEVTW*SRFKHWVHKTSAFYVVPICLSFKQSEYVTLLSSQNCSXXXXXXXXXXWITSK*NESITAYDK*TQIDISRGKQLNLIENHTMTSLQTRNFSKENFKGHYIPPFLL*FACFGNFAAIIHFKIIFD*ICQGSSRGNKSYKFSLRSLHETLIQETLSSPKCAKHDS*LSWLYIRS*YTRKPGFCITELFITYDTS  658
                E+VMHI+ED IIS+  SH   FEVTW*S F+HWVHK  AFYV+PI L+ KQS+YVTLLS+QNC ILL IICAL WIT K*NESIT Y++   ID+SR KQL+LI+NHT+ SLQ+ NFS+EN K +YIPPFLL*  CFGNFAAIIHFKIIFD*IC  +S  NK Y+F+LR  H+TL+QETL SPKC KHDS   WL IRS YTRKP FCITEL ITY+ S
Subject   4027  EKVMHIMEDRIISESGSHRALFEVTW*S*FEHWVHKPPAFYVIPIRLALKQSKYVTLLSAQNCPILLRIICALTWITGK*NESITTYNEQA*IDVSRRKQLDLIKNHTVASLQSCNFSEENLKSYYIPPFLL*LTCFGNFAAIIHFKIIFD*IC*STSGRNKGYEFTLRPFHKTLVQETLPSPKCTKHDSQFPWLNIRSGYTRKPRFCITELLITYNAS  4683

Range 4: 4029 to 4679 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
325.9 bits(705) 0.0 148/217(68%) 0/217(0%) Minus/Plus
Query        6  WCHK**KVQ*CKTLAFWYINCGYKAKRANCRAWHIWGWKEFLV*EFHEEI*GKICNFCFP*TSLGKFNQK*S*NG*WLQSCQSRQIKEGRVGCSDL*SFP*KSFWFEGWSLCDFR*GSVVSPWIYRFVFTCHTQ*CFHFTCW*SMPEHI*FTEGSSNFGS*AE*HTQTA*RKDI*VQHRKQTFCEPNV*I*TTMSLQKRFNDCSLC*LCNLPQYA*L  656
                W +K**+VQ*CKTLAFWYI+ GY AK  +CRAW+IWGW+EFLV EF+E++*G I N CF  T   KFNQK*S*NG* LQSCQSR +KEGRVGCS+ * FP KS   EGW LCDF *G VVS WI+R +   +T *CFHFTC *SM +HI*F +GS NFG *AE*HT TA* +D+*V HRKQ  CEPNV I TTMSLQK  +DC   *LC+LP YA*L
Subject   4029  WRYK**EVQ*CKTLAFWYIHYGY*AKGIDCRAWYIWGWEEFLVQEFYEKV*G*IRNLCFSQTCFSKFNQK*S*NG**LQSCQSR*VKEGRVGCSNF*GFPQKSCRIEGWPLCDF**GPVVSSWIHRSMLAHYT**CFHFTCR*SMSKHI*FAKGSGNFGR*AE*HT*TA*GQDV*V*HRKQEVCEPNVRIKTTMSLQKGLDDCRFR*LCDLP*YA*L  4679

Range 5: 4064 to 4684 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
309.4 bits(669) 0.0 142/207(69%) 0/207(0%) Plus/Minus
Query        1  GGSHAYCGRLHNQQRLQSLNLF*SDMVV*IQTLGSQNVCFLCCTYMSFLQAV*VCHSAQLPKLLDPSVNHMCSGMDHQQVK*KHHCV*QVNTNRYIQGETTEPHRKSHNDQPSNQKLF*GKLQRSLHPTLPSLICLLWQLCSHHPFQDHF*LNLPRLV*GKQKLQIFPQISS*NSYTRNSFQPQMCQARQLALLALYPQLIYQKARV  621
                G SHAY GR HNQ++ QS + F*SDMVV I+TLGSQ  CFLC TY S  QAV*VCHSAQ PKL DP  NHMC  MDH+QVK*KHH V*  + +R IQ ETT PH+KSH+ QPS  +LF*GK Q+ LHPTLPSL  LLWQLCS+HPFQDHF*LNL + V  KQ+L+I+PQ  S*NS TRNS QPQM QARQ   LA YP  IYQKA+V
Subject   4064  GESHAYYGRSHNQRKRQSSSPF*SDMVVLIRTLGSQTSCFLCYTYTSCPQAV*VCHSAQRPKLPDPFANHMCFDMDHRQVK*KHHYV**ASIDRCIQEETTGPHQKSHSGQPSILQLF*GKPQKLLHPTLPSLTYLLWQLCSYHPFQDHF*LNLLKHVWEKQRLRIYPQTFS*NSCTRNSSQPQMYQARQSIPLA*YP*WIYQKAKV  4684

Range 6: 4028 to 4684 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
303.5 bits(656) 0.0 151/219(69%) 0/219(0%) Minus/Plus
Query        1  LVS*VMKSSVMQNPGFLVYQLRI*SQES*LSCLAHLGLERVSCIRVS*RDLRENL*LLFPLDEPWQIQSKMILKWMMAAKLPKQANQRRKGGM**PLKFSLEKFLV*RLVIV*FSMRFSCFPLDISICVYLSYAVMLSFHLLVIHARAHMIHRRIEQFWELSRVTYSDCLKERHIGTT*KADVL*TQCLNLDYHVTSKKVQ*LQPLLIMQSSTICMTSS  657
                L  *VM+SSVMQN GFLVY LRI SQ +*LSCL HLGL RVSC RV *+ LR N * LF  D   QIQSKMILKWM+AAKLPKQ +QRRKGGM** L+FS EK   *RL  V*F MR SCF LD SI     Y VMLSFHL VIH +AHMI +RI QFW LSRVTY DCL+ R IG T*KA  L*TQC N DYHVTSK+ +*L   LIM+SS ICMT S
Subject   4028  LAL*VMRSSVMQNLGFLVYPLRILSQGN*LSCLVHLGLGRVSCTRVL*KGLRVNS*PLFLPDVL*QIQSKMILKWMIAAKLPKQVSQRRKGGM**LLRFSSEKLQD*RLATV*FLMRSSCFLLDTSIYACSLYVVMLSFHLPVIHVKAHMIRKRIGQFWALSRVTYLDCLRARRIGIT*KAGGL*TQCSNQDYHVTSKRAR*LPLSLIMRSSIICMTFS  4684

Grapevine rupestris stem pitting associated virus isolate SK704 C, complete genome

Sequence ID: KX274276.1 Length: 8726 Number of Matches: 6

Range 1: 4028 to 4684 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
519.3 bits(1127) 0.0 215/219(98%) 0/219(0%) Minus/Plus
Query        2  TGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFL  658
                TGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKS+LYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIR+DAFISLAGDPCQSTYDSQKDRAILGAEQSDILR+LEGKTYRYNIESRRFVNPMFE RLPCHFKKGSMTAAFADYAIFHNMHDFL
Subject   4028  TGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKSYLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRNDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRMLEGKTYRYNIESRRFVNPMFEFRLPCHFKKGSMTAAFADYAIFHNMHDFL  4684

Range 2: 4030 to 4683 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
456.5 bits(990) 0.0 207/218(95%) 0/218(0%) Plus/Minus
Query        3  RKSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTKRLLSMLYLYVFPXXXXXXXXXXAPKIARSFCESYVLWHGSPASEMKASLRMTSKHKSIYPGGNN*TSSKITQ*PAFKPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLGFISAVDIPESQGFASLNFSSLMTP  656
                RKSC+LWKIA*SAKAAVIEPFLK*HGSL+SNIGFT RLLSMLYLYVFPSS LSMSLCSAPKIARSFCESYVLWHGSPASEMKASLRMTS+H+S+YPGGNN*TSSKITQ PAF+PETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYK LFPAPNVPSTTVSSLG ISAVDIPESQGFASLNFSSLMTP
Subject   4030  RKSCMLWKIA*SAKAAVIEPFLK*HGSLNSNIGFTNRLLSMLYLYVFPSSILSMSLCSAPKIARSFCESYVLWHGSPASEMKASLRMTSRHRSMYPGGNN*TSSKITQWPAFRPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYK*LFPAPNVPSTTVSSLGLISAVDIPESQGFASLNFSSLMTP  4683

Range 3: 4030 to 4683 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
454.2 bits(985) 0.0 188/218(86%) 0/218(0%) Minus/Plus
Query        3  WCHK**KVQ*CKTLAFWYINCGYKAKRANCRAWHIWGWKEFLV*EFHEEI*GKICNFCFP*TSLGKFNQK*S*NG*WLQSCQSRQIKEGRVGCSDL*SFP*KSFWFEGWSLCDFR*GSVVSPWIYRFVFTCHTQ*CFHFTCW*SMPEHI*FTEGSSNFGS*AE*HTQTA*RKDI*VQHRKQTFCEPNV*I*TTMSLQKRFNDCSLC*LCNLPQYA*LP  656
                WCHK**KVQ*CKTLAFWYINCGY AKRANCRAWHIWGWKE LV*+FHEE+* KICNFCFP*TSLGKFNQ+*S*NG*WLQSCQSRQIKEGRVGCS+ * FP*KSFW EGW LCDFR*GSVVSPWI+  +  CHTQ* FHFTCW*SMPEHI*FT+GS  FGS*AE HTQ A*RKD+*VQHRKQT CEPNV*I*TTMSLQK  NDC LC*LCNLP +A*LP
Subject   4030  WCHK**KVQ*CKTLAFWYINCGY*AKRANCRAWHIWGWKELLV*KFHEEV*RKICNFCFP*TSLGKFNQE*S*NG*WLQSCQSRQIKEGRVGCSNF*GFP*KSFWSEGWPLCDFR*GSVVSPWIH*SMSACHTQ*RFHFTCW*SMPEHI*FTKGSGYFGS*AERHTQNA*RKDV*VQHRKQTVCEPNV*I*TTMSLQKGLNDCCLC*LCNLP*HA*LP  4683

Range 4: 4029 to 4685 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
427.2 bits(926) 0.0 192/219(88%) 0/219(0%) Minus/Plus
Query        1  LVS*VMKSSVMQNPGFLVYQLRI*SQES*LSCLAHLGLERVSCIRVS*RDLRENL*LLFPLDEPWQIQSKMILKWMMAAKLPKQANQRRKGGM**PLKFSLEKFLV*RLVIV*FSMRFSCFPLDISICVYLSYAVMLSFHLLVIHARAHMIHRRIEQFWELSRVTYSDCLKERHIGTT*KADVL*TQCLNLDYHVTSKKVQ*LQPLLIMQSSTICMTSS  657
                LVS*VMKSSVMQNPGFLVYQLRI SQES*LSCLAHLGLERV+CI+VS*R L+ENL*LLFPLDEPWQIQS+MILKWMMAAKLPKQANQRRKGGM** L+FSLEKFLV*RL IV*FSMRFSCFPLD  I V LSYA+ LSFHLLVIHARAHMIH+RI  FWELSR TYS+CLKER IGTT*KAD L*TQCLNLDYHVTSK+ Q*L PLLIMQSS  CMTSS
Subject   4029  LVS*VMKSSVMQNPGFLVYQLRILSQES*LSCLAHLGLERVTCIKVS*RGLKENL*LLFPLDEPWQIQSRMILKWMMAAKLPKQANQRRKGGM**LLRFSLEKFLV*RLAIV*FSMRFSCFPLDTLIYVCLSYAMTLSFHLLVIHARAHMIHKRIGLFWELSRATYSECLKERRIGTT*KADGL*TQCLNLDYHVTSKRAQ*LLPLLIMQSSITCMTSS  4685

Range 5: 4028 to 4684 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
423.5 bits(918) 0.0 191/219(87%) 0/219(0%) Plus/Minus
Query        2  EEVMHIVEDCIISKGCSH*TFFEVTW*SRFKHWVHKTSAFYVVPICLSFKQSEYVTLLSSQNCSXXXXXXXXXXWITSK*NESITAYDK*TQIDISRGKQLNLIENHTMTSLQTRNFSKENFKGHYIPPFLL*FACFGNFAAIIHFKIIFD*ICQGSSRGNKSYKFSLRSLHETLIQETLSSPKCAKHDS*LSWLYIRS*YTRKPGFCITELFITYDTS  658
                EEVMH++EDCIISKG SH*  FEVTW*S+FKHWVHK SAFYVVPI LSFK SEYV LLSSQN  ILL*IICALAWITSK*NES+ AYDK T I++SRGKQLNLIENHTM SLQTRNFSKEN K +YIPPFLL*FACFGNFAAIIHFKII D*ICQGSSRGNKSYKFS R LHET IQ TLSSPKCAKHDS*LSWL IRS*YTRKPGFCITELFITYDTS
Subject   4028  EEVMHVMEDCIISKGSSH*ALFEVTW*SKFKHWVHKPSAFYVVPIRLSFKHSEYVALLSSQNSPILL*IICALAWITSK*NESVIAYDKQT*INVSRGKQLNLIENHTMASLQTRNFSKENLKSYYIPPFLL*FACFGNFAAIIHFKIILD*ICQGSSRGNKSYKFSFRPLHETFIQVTLSSPKCAKHDS*LSWLNIRS*YTRKPGFCITELFITYDTS  4684

Range 6: 4065 to 4685 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
408.9 bits(886) 0.0 177/207(86%) 0/207(0%) Plus/Minus
Query        1  GGSHAYCGRLHNQQRLQSLNLF*SDMVV*IQTLGSQNVCFLCCTYMSFLQAV*VCHSAQLPKLLDPSVNHMCSGMDHQQVK*KHHCV*QVNTNRYIQGETTEPHRKSHNDQPSNQKLF*GKLQRSLHPTLPSLICLLWQLCSHHPFQDHF*LNLPRLV*GKQKLQIFPQISS*NSYTRNSFQPQMCQARQLALLALYPQLIYQKARV  621
                GGSHA  GRLHNQQR QSL+ F*SDMVV*IQTLGSQ VCFLCCTY SFLQA *VC SAQLPK  DP VNHMCSGMDHQQVK*K HCV*Q + ++ IQGETTEPHRKSHN QPS+QKLF*GK Q+ LHPTLPSLICLLWQLCSHHPFQDH *LNLPRLV*GKQKLQIF Q SS*N YT NSFQPQMCQARQLALLA YPQLIYQKARV
Subject   4065  GGSHACYGRLHNQQRQQSLSPF*SDMVV*IQTLGSQTVCFLCCTYTSFLQAF*VCRSAQLPK*PDPFVNHMCSGMDHQQVK*KRHCV*QADIDQCIQGETTEPHRKSHNGQPSDQKLF*GKPQKLLHPTLPSLICLLWQLCSHHPFQDHS*LNLPRLV*GKQKLQIFLQTSS*NFYTSNSFQPQMCQARQLALLA*YPQLIYQKARV  4685

Rupestris stem pitting associated virus 1, complete genome

Sequence ID: AF057136.1 Length: 8744 Number of Matches: 6

Range 1: 4028 to 4684 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
517.9 bits(1124) 0.0 214/219(98%) 0/219(0%) Minus/Plus
Query        2  TGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFL  658
                TGVISDEKFSDAKPWLSGIST DIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDD CKVAKAG+SKKEGWDVVTFEVFLRKV+GLKAGHCVIFDEVQLFPPGYIDLCLL+IRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFL
Subject   4028  TGVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDSCKVAKAGRSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQLFPPGYIDLCLLIIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFL  4684

Range 2: 4030 to 4683 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
430.0 bits(932) 0.0 200/218(92%) 0/218(0%) Plus/Minus
Query        3  RKSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTKRLLSMLYLYVFPXXXXXXXXXXAPKIARSFCESYVLWHGSPASEMKASLRMTSKHKSIYPGGNN*TSSKITQ*PAFKPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLGFISAVDIPESQGFASLNFSSLMTP  656
                RKSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFT  LLSMLYLYV PSSSLSMSLCSAPKIARSFCESYVL HGSPASEMKASLR+ SKH+S+YPGGNN TSSKITQ PAF P TFLRKTSKVTTSHPSFFDLPALATLQ SSISRSFLIEFAKARLGETKVTN PSDLFMKLLYKKLFPAPNVPSTTV+SLG IS VDIPESQGFASLNFSSL+TP
Subject   4030  RKSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTNLLLSMLYLYVLPSSSLSMSLCSAPKIARSFCESYVL*HGSPASEMKASLRIISKHRSMYPGGNNWTSSKITQWPAFNPATFLRKTSKVTTSHPSFFDLPALATLQLSSISRSFLIEFAKARLGETKVTNLPSDLFMKLLYKKLFPAPNVPSTTVNSLGLISVVDIPESQGFASLNFSSLITP  4683

Range 3: 4028 to 4684 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
341.5 bits(739) 0.0 153/219(70%) 0/219(0%) Plus/Minus
Query        2  EEVMHIVEDCIISKGCSH*TFFEVTW*SRFKHWVHKTSAFYVVPICLSFKQSEYVTLLSSQNCSXXXXXXXXXXWITSK*NESITAYDK*TQIDISRGKQLNLIENHTMTSLQTRNFSKENFKGHYIPPFLL*FACFGNFAAIIHFKIIFD*ICQGSSRGNKSYKFSLRSLHETLIQETLSSPKCAKHDS*LSWLYIRS*YTRKPGFCITELFITYDTS  658
                E+VMHI+EDCIIS+  SH   FEVTW S F+HWVHK  AFYV+PI  + KQS+YVTLLS+QNC ILL +ICAL WITSK*NESIT Y+K   ID+SR KQL+LI+NHT+ SLQ+ NFSKEN K +YIPPFLL*  CF NFAAIIHFKIIFD*IC  +S  NK Y+F+LR  HETL+QETL SPKC KHDS   WL I S YTRKP FCITEL ITY+ S
Subject   4028  EKVMHIMEDCIISESGSHRALFEVTWQS*FEHWVHKPPAFYVIPIRFALKQSKYVTLLSAQNCPILLRVICALTWITSK*NESITTYNKQA*IDVSRRKQLDLIKNHTVASLQSCNFSKENLKSYYIPPFLL*PTCFSNFAAIIHFKIIFD*IC*STSGRNKGYEFTLRPFHETLVQETLPSPKCTKHDSQFPWLNISSRYTRKPRFCITELLITYNAS  4684

Range 4: 4030 to 4680 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
322.7 bits(698) 0.0 147/217(68%) 0/217(0%) Minus/Plus
Query        6  WCHK**KVQ*CKTLAFWYINCGYKAKRANCRAWHIWGWKEFLV*EFHEEI*GKICNFCFP*TSLGKFNQK*S*NG*WLQSCQSRQIKEGRVGCSDL*SFP*KSFWFEGWSLCDFR*GSVVSPWIYRFVFTCHTQ*CFHFTCW*SMPEHI*FTEGSSNFGS*AE*HTQTA*RKDI*VQHRKQTFCEPNV*I*TTMSLQKRFNDCSLC*LCNLPQYA*L  656
                W +K**+VQ*CKTLAFWYI   Y AK  +CRAW+IWGW+EFLV EFHE++*G I N CF  T   KFNQK*S*NG* LQSC SR +KEGRVGCS+ * FP*KS   EGW LCDF *G VVS WI+R +   +T *CFHFTCW*SM +HI*  +GS NFG *AE*HT TA* +++*V HRKQ  CEPNV I T MSLQK  +DC   *LCNLP YA*L
Subject   4030  WRYK**EVQ*CKTLAFWYIYY*Y*AKGIDCRAWYIWGWEEFLVQEFHEKV*G*IRNLCFSQTCFSKFNQK*S*NG**LQSC*SR*VKEGRVGCSNF*GFP*KSCRIEGWPLCDF**GPVVSSWIHRSMLAYYT**CFHFTCW*SMSKHI*LAKGSGNFGR*AE*HT*TA*GQNV*V*HRKQEVCEPNVRIKTAMSLQKGLDDCRFR*LCNLP*YA*L  4680

Range 5: 4029 to 4685 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
300.3 bits(649) 0.0 151/219(69%) 0/219(0%) Minus/Plus
Query        1  LVS*VMKSSVMQNPGFLVYQLRI*SQES*LSCLAHLGLERVSCIRVS*RDLRENL*LLFPLDEPWQIQSKMILKWMMAAKLPKQANQRRKGGM**PLKFSLEKFLV*RLVIV*FSMRFSCFPLDISICVYLSYAVMLSFHLLVIHARAHMIHRRIEQFWELSRVTYSDCLKERHIGTT*KADVL*TQCLNLDYHVTSKKVQ*LQPLLIMQSSTICMTSS  657
                L  *VM+SSVMQN GFLVY L I SQ +*LSCL HLGL RVSC RVS*+ LR N * LF  D   QIQSKMILKWM+AAKL KQ  QRRKGGM** L+FSLEK   *RL  V*F MR SCF LD SI   L Y VMLSFHLLVIH +AHM  +RI QFW LSRVTY DCL+ + IG T*KA  L*TQC N D HVTSK+ +*L   LIMQSS ICMT S
Subject   4029  LAL*VMRSSVMQNLGFLVYLLLILSQGN*LSCLVHLGLGRVSCTRVS*KGLRVNS*PLFLPDVL*QIQSKMILKWMIAAKLLKQVGQRRKGGM**LLRFSLEKLQD*RLATV*FLMRSSCFLLDTSIYACLLYVVMLSFHLLVIHVKAHMTRKRIGQFWALSRVTYLDCLRAKRIGIT*KAGGL*TQCSNQDCHVTSKRAR*LPLSLIMQSSIICMTFS  4685

Range 6: 4065 to 4685 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
295.7 bits(639) 0.0 139/207(67%) 0/207(0%) Plus/Minus
Query        1  GGSHAYCGRLHNQQRLQSLNLF*SDMVV*IQTLGSQNVCFLCCTYMSFLQAV*VCHSAQLPKLLDPSVNHMCSGMDHQQVK*KHHCV*QVNTNRYIQGETTEPHRKSHNDQPSNQKLF*GKLQRSLHPTLPSLICLLWQLCSHHPFQDHF*LNLPRLV*GKQKLQIFPQISS*NSYTRNSFQPQMCQARQLALLALYPQLIYQKARV  621
                G SHAY GRLHNQ++ QS + F*SDM V I+TLGSQ  CFLC TY    QAV*VCHSAQ PKL DP  +HMC  MDHQQVK*KHH V*  + +R IQ ETT PH+KSH+ QPS  +LF*GK Q+ LHPTLPSL  LL QLCS+HPFQDHF*LNL + V  KQ+L+I+PQ  S*NS TRNS QPQM QARQ   LA Y   IYQKA+V
Subject   4065  GESHAYYGRLHNQRKRQSSSPF*SDMAVLIRTLGSQTSCFLCYTYTFCPQAV*VCHSAQRPKLPDPFASHMCFDMDHQQVK*KHHYV**ASIDRCIQEETTGPHQKSHSGQPSILQLF*GKPQKLLHPTLPSLTYLL*QLCSYHPFQDHF*LNLLKHVWEKQRLRIYPQTFS*NSCTRNSSQPQMYQARQSIPLA*YQ**IYQKAKV  4685

Grapevine Rupestris stem pitting associated virus, complete genome

Sequence ID: AF026278.1 Length: 8725 Number of Matches: 6

Range 1: 4027 to 4683 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
517.9 bits(1124) 0.0 214/219(98%) 0/219(0%) Minus/Plus
Query        2  TGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFL  658
                TGVISDEKFSDAKPWLSGIST DIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDD CKVAKAG+SKKEGWDVVTFEVFLRKV+GLKAGHCVIFDEVQLFPPGYIDLCLL+IRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFL
Subject   4027  TGVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDSCKVAKAGRSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQLFPPGYIDLCLLIIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFL  4683

Range 2: 4029 to 4682 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
430.0 bits(932) 0.0 200/218(92%) 0/218(0%) Plus/Minus
Query        3  RKSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTKRLLSMLYLYVFPXXXXXXXXXXAPKIARSFCESYVLWHGSPASEMKASLRMTSKHKSIYPGGNN*TSSKITQ*PAFKPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLGFISAVDIPESQGFASLNFSSLMTP  656
                RKSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFT  LLSMLYLYV PSSSLSMSLCSAPKIARSFCESYVL HGSPASEMKASLR+ SKH+S+YPGGNN TSSKITQ PAF P TFLRKTSKVTTSHPSFFDLPALATLQ SSISRSFLIEFAKARLGETKVTN PSDLFMKLLYKKLFPAPNVPSTTV+SLG IS VDIPESQGFASLNFSSL+TP
Subject   4029  RKSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTNLLLSMLYLYVLPSSSLSMSLCSAPKIARSFCESYVL*HGSPASEMKASLRIISKHRSMYPGGNNWTSSKITQWPAFNPATFLRKTSKVTTSHPSFFDLPALATLQLSSISRSFLIEFAKARLGETKVTNLPSDLFMKLLYKKLFPAPNVPSTTVNSLGLISVVDIPESQGFASLNFSSLITP  4682

Range 3: 4027 to 4683 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
340.6 bits(737) 0.0 153/219(70%) 0/219(0%) Plus/Minus
Query        2  EEVMHIVEDCIISKGCSH*TFFEVTW*SRFKHWVHKTSAFYVVPICLSFKQSEYVTLLSSQNCSXXXXXXXXXXWITSK*NESITAYDK*TQIDISRGKQLNLIENHTMTSLQTRNFSKENFKGHYIPPFLL*FACFGNFAAIIHFKIIFD*ICQGSSRGNKSYKFSLRSLHETLIQETLSSPKCAKHDS*LSWLYIRS*YTRKPGFCITELFITYDTS  658
                E+VMHI+EDCIIS+  SH   FEVTW S F+HWVHK  AFYV+PI L+ KQS+YVTLLS+QNC ILL IICAL WIT K*NESIT Y+K   ID+SR KQL+LI+NHT+ SLQ+ NFS+EN K +YIPPFLL*  CFGNFAAIIHFKIIFD*IC  +S  NK Y+ +LR  HETL+Q+TL SPKC KHDS   WL IRS YTRKP FCITEL ITY+ S
Subject   4027  EKVMHIMEDCIISESGSHRALFEVTWQS*FEHWVHKPPAFYVIPIRLALKQSKYVTLLSAQNCPILLRIICALTWITGK*NESITTYNKQA*IDVSRRKQLDLIKNHTVASLQSCNFSEENLKSYYIPPFLL*PTCFGNFAAIIHFKIIFD*IC*STSGRNKGYELTLRPFHETLVQKTLPSPKCTKHDSQFPWLNIRSRYTRKPRFCITELLITYNAS  4683

Range 4: 4029 to 4679 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
325.0 bits(703) 0.0 146/217(67%) 0/217(0%) Minus/Plus
Query        6  WCHK**KVQ*CKTLAFWYINCGYKAKRANCRAWHIWGWKEFLV*EFHEEI*GKICNFCFP*TSLGKFNQK*S*NG*WLQSCQSRQIKEGRVGCSDL*SFP*KSFWFEGWSLCDFR*GSVVSPWIYRFVFTCHTQ*CFHFTCW*SMPEHI*FTEGSSNFGS*AE*HTQTA*RKDI*VQHRKQTFCEPNV*I*TTMSLQKRFNDCSLC*LCNLPQYA*L  656
                W +K**+VQ*CKTLAFWYI  GY AK  +CRAW+IWGW+EF V EFHE++*G + N CF  T   KFNQK*S*NG* LQSCQSR +KEGRVGCS+ * FP KS   EGW LCDF *G +VS WI+R +   +T *CFHFTC *SM +HI*F +GS NFG *AE*HT TA* +D+*V HRKQ  CEPNV I T MSLQK  +DC   *LCNLP YA*L
Subject   4029  WRYK**EVQ*CKTLAFWYIYYGY*AKGIDCRAWYIWGWEEFFVQEFHEKV*G*VRNLCFSQTCFSKFNQK*S*NG**LQSCQSR*VKEGRVGCSNF*GFPQKSCRIEGWPLCDF**GPIVSSWIHRSMLAYYT**CFHFTCR*SMSKHI*FAKGSGNFGR*AE*HT*TA*GQDV*V*HRKQEVCEPNVRIKTAMSLQKGLDDCRFR*LCNLP*YA*L  4679

Range 5: 4064 to 4684 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
303.0 bits(655) 0.0 139/207(67%) 0/207(0%) Plus/Minus
Query        1  GGSHAYCGRLHNQQRLQSLNLF*SDMVV*IQTLGSQNVCFLCCTYMSFLQAV*VCHSAQLPKLLDPSVNHMCSGMDHQQVK*KHHCV*QVNTNRYIQGETTEPHRKSHNDQPSNQKLF*GKLQRSLHPTLPSLICLLWQLCSHHPFQDHF*LNLPRLV*GKQKLQIFPQISS*NSYTRNSFQPQMCQARQLALLALYPQLIYQKARV  621
                G SHAY GRLHNQ++ QS + F*SDM V I+TLGSQ  CFLC TY S  QAV*VCHSAQ PKL DP  NHMC  MDH+QVK*KHH V*  + +R IQ ET  PH+KSH+ QPS  +LF*GK Q+ LHPTLPSL  LLWQLCS+HPFQDHF*LNL + V  KQ+L+ +PQ  S*NS T+NS QPQM QARQ   LA YP  IYQKA+V
Subject   4064  GESHAYYGRLHNQRKRQSSSPF*SDMAVLIRTLGSQTSCFLCYTYTSCPQAV*VCHSAQRPKLPDPFANHMCFDMDHRQVK*KHHYV**ASIDRCIQEETIGPHQKSHSGQPSILQLF*GKPQKLLHPTLPSLTYLLWQLCSYHPFQDHF*LNLLKHVWEKQRLRTYPQTFS*NSCTKNSSQPQMYQARQSIPLA*YP**IYQKAKV  4684

Range 6: 4028 to 4684 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
299.4 bits(647) 0.0 150/219(68%) 0/219(0%) Minus/Plus
Query        1  LVS*VMKSSVMQNPGFLVYQLRI*SQES*LSCLAHLGLERVSCIRVS*RDLRENL*LLFPLDEPWQIQSKMILKWMMAAKLPKQANQRRKGGM**PLKFSLEKFLV*RLVIV*FSMRFSCFPLDISICVYLSYAVMLSFHLLVIHARAHMIHRRIEQFWELSRVTYSDCLKERHIGTT*KADVL*TQCLNLDYHVTSKKVQ*LQPLLIMQSSTICMTSS  657
                L  *VM+SSVMQN GFLVY LRI SQ +*LSCL HLGL RV C RVS*+ LR + * LF  D   QIQSKMILKWM+AAKLPKQ  QRRKGGM** L+FS EK   *RL  V*F MR +CF LD SI   L Y VMLSFHL VIH +AHMI +RI QFW LSRVTY DCL+ R IG T*KA  L*TQC N D HVTSK+ +*L   LIMQSS ICMT S
Subject   4028  LAL*VMRSSVMQNLGFLVYLLRILSQGN*LSCLVHLGLGRVFCTRVS*KGLRVSS*PLFLPDVL*QIQSKMILKWMIAAKLPKQVGQRRKGGM**LLRFSSEKLQD*RLATV*FLMRSNCFLLDTSIYACLLYVVMLSFHLPVIHVKAHMIRKRIGQFWALSRVTYLDCLRARRIGIT*KAGGL*TQCSNQDCHVTSKRAR*LPLSLIMQSSIICMTFS  4684

Nucleotide Sequence (803 letters)

Query ID:ds2016-132_4
Query definition:No definition line
Query length:951
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 16 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
81
162
243
324
405
486
567
648
729
803

Descriptions

Alignments

Rupestris stem pitting associated virus 1, complete genome

Sequence ID: AF057136.1 Length: 8744 Number of Matches: 9

Range 1: 6434 to 7207 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
590.3 bits(1282) 0.0 246/258(95%) 0/258(0%) Minus/Plus
Query       29  EMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKHYSPGCAVQGKVNILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAA  802
                EMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFE +D*ALSIW   SIMNNLVKALSAFEF+GVFSVLKFPVVIHSVPGSGKSSLIRELISEDE+F+AFTAGVPDSPNLTGRYIK YSPGCAV GKVNILDEYLSVQD SGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLD VIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAA
Subject   6434  EMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHYLSIMNNLVKALSAFEFVGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDKVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAA  7207

Range 2: 6694 to 6969 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
188.5 bits(405) 0.0 81/92(88%) 0/92(0%) Plus/Minus
Query      267  EERYLQVFTPNLQVLDLMKCASLGILIFWYGSENSTSKPEMS*TDKYSSSIFTFPCTAHPGE*CLMYLPVRLGLSGTPAVKATKLSSSEINS  542
                EERYLQVFTPNLQV DLMKCASLG+L+FWYGSENSTSKPE S TDKYSSSI TFP TAHPGE* LMYLPVRLGLSGTPAVKA K SSSEI+S
Subject   6694  EERYLQVFTPNLQVFDLMKCASLGMLMFWYGSENSTSKPEKSWTDKYSSSILTFPGTAHPGE*GLMYLPVRLGLSGTPAVKAMKFSSSEISS  6969

Range 3: 7018 to 7206 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
140.4 bits(300) 0.0 61/63(97%) 0/63(0%) Plus/Minus
Query       30  AAM*NQCLSSGVGSLDFKRVTTLKVEPLTSHGNLNSELCATARSTASLPKHISTPSTSRVKGD  218
                AAM*NQCLSSGVGSLDFKRVTTLKVEPLTS GNLNSELCATARSTASLPKHISTPSTS VKGD
Subject   7018  AAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSELCATARSTASLPKHISTPSTSSVKGD  7206

Range 4: 6433 to 6642 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.9 bits(275) 0.0 61/70(87%) 0/70(0%) Plus/Minus
Query      594  NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEIEHLILCLFLTRNLTQL*CASTSSSVIIS  803
                NLSTLKTP NS ADNALTKLFIIL+  QILKA*S  SNRPEIEHLILCLFLT+NLTQL* ASTSSSVIIS
Subject   6433  NLSTLKTPTNSNADNALTKLFIILK*CQILKA*SIASNRPEIEHLILCLFLTKNLTQL*WASTSSSVIIS  6642

Range 5: 6434 to 7204 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
379.1 bits(821) 0.0 171/257(67%) 0/257(0%) Plus/Minus
Query       32  SDVKPVPVLWGWVS*FQKGYHIEG*TSNLTRQLEFRVVRNSEIYRLLAKTYQHPLNI*SEGRSHNDVVQPVAANFETERGKVFASVHTKPTSLGLNEMRLFGNTDILVRV*KQYIKT*NVLNRQVLIKYIHFPLHCASW*VMLDVPPCEVRTVWNTSCESHETLVL*D*LPYXXXXXXXXXXMYNNWKFEHTENTYKLEG*QCFN*IIHNTRTTPNT*GLINHFKQA*N*APHFMLVPNQEPHTIVVCLHLLFCHHF  802
                S+VKPVP+LWGW+S*FQK Y ++ *TSN TR  EFRVVRNSEI+ LL K Y HP NI* + R HND VQ V AN +TE GK+FAS+H KPTS  L+EM LF N D+LV V +Q+IKT* +L+ QVLIKYI+FP HC  W + L+VP CE+R VWNT CES+E L+L +*LPY*TT TTTRHTM + WKF+HTENTYKL+ *QCFN*IIHNT+  PNT*GLIN FK A*N*A H MLVP+QE +TI++ LH    HHF
Subject   6434  SNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVVRNSEIHCLLTKAY*HPFNI*CKRRPHNDFVQTVTANLKTEGGKIFASIHAKPTSF*LDEMCLFRNADVLVWVREQHIKT*KILDGQVLIKYINFPWHCTPWRIRLNVPSCEIRAVWNTCCESYEILILGN*LPY*TTFTTTRHTMNDYWKFKHTENTYKLKC*QCFN*IIHNTQIMPNT*GLINSFK*A*N*ASHLMLVPDQESNTIIMGLHFFLGHHF  7204

Range 6: 6433 to 7206 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
375.4 bits(813) 0.0 175/258(68%) 0/258(0%) Minus/Plus
Query       30  *NDDRRGGGGTLQLCEVPG*EQA*NEVLNFRPV*SG*LGLKYLALFEYYE*FS*SIVSLRVYRCFQCAQISSCYT*CAW*W*E*FNKGVNLRGREFRGFHSWCSRQS*PHREVHQALLTRMRSARESEYT**VLVCSRHFRF*CTVFRPVPEYQYSQRGAFH*VQDL*VWCEHLQIPFLFRFQS*QRRAGRRHCGIALHSRC*GGADMFWQGGGRSRCCAQL*IQVAV*G*RFNLQCGNPFEIKRPNPRGQALVLHRC  803
                *NDDR   GG L LC + G EQA*+E+LNFRP+*S *LGLKYLALFEYYE*FS*SIVS+ V RCFQCA ISS ++*CAW*W*+*FNKG N RG EF  FHS CSRQ * HR+VH AL +R+ SARES YT**VLV  R FRF*C V  P+P++Q+S RG FH V++L*VW E+LQI FL RF  *Q R G+ HCG+A ++RC* GA+M W GG  SRCCAQL*IQ+ +* *RFN    N FEIKR NPRG ALVLH C
Subject   6433  *NDDRGRSGGPL*LC*ILGQEQA*DEMLNFRPI*SY*LGLKYLALFEYYE*FS*SIVSI*VCRCFQCA*ISSSHS*CAW*W*K*FNKGANFRG*EFHSFHSRCSRQP*SHRKVH*ALFSRVCSARES*YT**VLVRPRFFRF*CAVLGPIPKHQHS*RGTFHQVKNL*VWREYLQISFLLRF*G*Q*RFGQSHCGVAFYTRC*RGANMLW*GGSGSRCCAQL*IQITL*S*RFNF*RRNSFEIKRSNPRG*ALVLHCC  7206

Range 7: 6435 to 6971 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
230.2 bits(496) 0.0 125/179(70%) 0/179(0%) Plus/Minus
Query      265  KRKGICKCSHQTYKSWT**NAPLWEY*YSGTGLKTVHQNLKCLEQTSTHQVYSLSLALRILVSNA*CTSL*G*DCLEHQL*KPRNSRPLRLTPLLNYSYHYQAHYV*QLEI*AH*KHXXXXXXXXXXXNYS*YSNNAKYLRPNQPLQTGLKLSTSFYACS*PGTSHNCSVPPPPLLSSF  801
                +RK ICK S QTYK  T**N PL E *  G G +T HQNLK L +TSTHQVY LSLAL  L + A*CT L* * CLEH L*K  NS P +L PLLNY YHYQAHY * LEI*AH*KHL T+ LTML*LNYS*YSNNAKYLRPNQ LQ GLKLS S YACS*P   HN + PP    SSF
Subject   6435  RRKDICKYSRQTYKFLT**NVPL*EC*CFGMGPRTAHQNLKNLGRTSTHQVY*LSLALHTLENKA*CTFL*D*GCLEHLL*KL*NSHPRKLAPLLNYFYHYQAHYE*LLEI*AH*KHLQTQMLTML*LNYS*YSNNAKYLRPNQ*LQIGLKLSISSYACS*PRI*HNYNGPPLLPRSSF  6971

Range 8: 7032 to 7217 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
88.6 bits(187) 0.0 42/62(68%) 0/62(0%) Plus/Minus
Query       19  CLVGQRCKTSACPLGLGLLISKGLPH*RLNL*PHTAT*IQSCAQQRDLPPPCQNISAPPQHL  204
                C++ Q+CKTSA PLGL LLISK L  *+LNL* H   *IQSCAQQRD  PP Q+I AP QHL
Subject   7032  CVL*QQCKTSAYPLGLDLLISKELRR*KLNL*LHKVI*IQSCAQQRDPLPPYQSILAPLQHL  7217

Range 9: 6435 to 7217 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
295.2 bits(638) 0.0 172/261(66%) 0/261(0%) Minus/Plus
Query       19  K**QKRRWRHTTIV*GSWLGTSIK*GAQFQACLKWLIRP*VFGVVRVL*II*LKHCQPSSL*VFSVCSNFQLLYIVCLXXXXXXX*GS*SQRTRVSWLSQLVFQTVLTSQGGTSSITHQDAQCKGK*IYLMSTCLFKTFQVLMYCFQTRTRISVFPKRRISLSPRLVGLV*TLANTFPLSVSKLAATGWTTSLWDRPSL*MLRGC*YVXXXXXXXXXXXXXLNSSCRVRLEVQPSMW*PF*NQETQPQRTGTGFTSLPNQT  801
                K** +++WR   IV  SW GTSI+* AQFQA LK LIRP*VFG++ VL*II*LKHCQ  SL*VFSVC NFQ  +IVCLVVV+VV**GS*  R R+S LSQ VFQT L SQ GT S+  Q  QC+GK IYLMSTC  K FQVLM C +T T+ S F KR IS S +LVGL * LAN FP SV +LA T WT SLW R   *ML+GC*Y L RR+ ISLLRTTLNS+  V+LEVQ    * F*NQE QPQR GTGFT L   T
Subject   6435  K**PRKKWRPIIIVLDSWSGTSIR*DAQFQAYLKLLIRP*VFGII*VL*II*LKHCQHLSL*VFSVCLNFQ*SFIVCLVVVKVV**GS*FPRMRIS*LSQQVFQTALISQEGTLSLILQGVQCQGKLIYLMSTCPSKIFQVLMCCSRTHTKTSAFLKRHISSSQKLVGLA*ILANIFPPSVLRLAVTVWTKSLWGRLLH*MLKGC*YALVRRQWISLLRTTLNSNYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDT  7217

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OE8

Sequence ID: AB277784.1 Length: 2876 Number of Matches: 11

Range 1: 689 to 1462 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
612.8 bits(1331) 0.0 257/258(100%) 0/258(0%) Minus/Plus
Query       29  EMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKHYSPGCAVQGKVNILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAA  802
                EMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIK YSPGCAVQGKVNILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAA
Subject    689  EMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKVNILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAA  1462

Range 2: 688 to 1461 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
580.7 bits(1261) 0.0 247/258(96%) 0/258(0%) Minus/Plus
Query       30  *NDDRRGGGGTLQLCEVPG*EQA*NEVLNFRPV*SG*LGLKYLALFEYYE*FS*SIVSLRVYRCFQCAQISSCYT*CAW*W*E*FNKGVNLRGREFRGFHSWCSRQS*PHREVHQALLTRMRSARESEYT**VLVCSRHFRF*CTVFRPVPEYQYSQRGAFH*VQDL*VWCEHLQIPFLFRFQS*QRRAGRRHCGIALHSRC*GGADMFWQGGGRSRCCAQL*IQVAV*G*RFNLQCGNPFEIKRPNPRGQALVLHRC  803
                *NDDRRGGGGTLQLCEVPG*EQA*+EVLNFRPV*SG*LGLKYLALFEYYE*FS*SI+SLRVYRCFQC QISSCYT*CAW*W*E*FNKGVNLRGREFRGFHS CSRQS*PHREVHQALLTRMRSAR+SEYT**VLV SRHF F*CTVFRPVPEYQYSQRGAFH*V DL*VWCEHLQIPFLFRFQS*QRRAGRRHCGIALHSRC* GADMFWQGGGRSRCCAQL*IQV V*G RFNLQCGNPFEIKRPNPRGQALVLHRC
Subject    688  *NDDRRGGGGTLQLCEVPG*EQA*DEVLNFRPV*SG*LGLKYLALFEYYE*FS*SIISLRVYRCFQCTQISSCYT*CAW*W*E*FNKGVNLRGREFRGFHSGCSRQS*PHREVHQALLTRMRSARQSEYT**VLVRSRHFGF*CTVFRPVPEYQYSQRGAFH*V*DL*VWCEHLQIPFLFRFQS*QRRAGRRHCGIALHSRC*RGADMFWQGGGRSRCCAQL*IQVTV*GSRFNLQCGNPFEIKRPNPRGQALVLHRC  1461

Range 3: 689 to 1462 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
559.2 bits(1214) 0.0 247/258(96%) 0/258(0%) Plus/Minus
Query       29  GSDVKPVPVLWGWVS*FQKGYHIEG*TSNLTRQLEFRVVRNSEIYRLLAKTYQHPLNI*SEGRSHNDVVQPVAANFETERGKVFASVHTKPTSLGLNEMRLFGNTDILVRV*KQYIKT*NVLNRQVLIKYIHFPLHCASW*VMLDVPPCEVRTVWNTSCESHETLVL*D*LPYXXXXXXXXXXMYNNWKFEHTENTYKLEG*QCFN*IIHNTRTTPNT*GLINHFKQA*N*APHFMLVPNQEPHTIVVCLHLLFCHHF  802
                GSDVKPVPVLWGWVS*FQKGYHIEG*TSNLTR LEFRVVRNSEIYRLLAKTYQHP NI*SEGRSHNDVVQPVAANFETERGKVFASVHTKPTSL LNEMRLFGNTDILVRV*KQYIKT NVLN QVLIKYIHF LHCASW*V LDVPPCEVRTVWNT CESHETLVL*D*LPY*TTLTTTRHTMYNNWKFE+TENTYKLEG* CFN*IIHNTRTTPNT*GLINHFKQA*N*APH MLVPNQEPHTIVVCLHLLFCHHF
Subject    689  GSDVKPVPVLWGWVS*FQKGYHIEG*TSNLTR*LEFRVVRNSEIYRLLAKTYQHPFNI*SEGRSHNDVVQPVAANFETERGKVFASVHTKPTSLRLNEMRLFGNTDILVRV*KQYIKTRNVLNGQVLIKYIHFALHCASW*VRLDVPPCEVRTVWNTRCESHETLVL*D*LPY*TTLTTTRHTMYNNWKFEYTENTYKLEG**CFN*IIHNTRTTPNT*GLINHFKQA*N*APHLMLVPNQEPHTIVVCLHLLFCHHF  1462

Range 4: 876 to 1226 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
254.9 bits(550) 0.0 110/117(94%) 0/117(0%) Plus/Minus
Query      265  KRKGICKCSHQTYKSWT**NAPLWEY*YSGTGLKTVHQNLKCLEQTSTHQVYSLSLALRILVSNA*CTSL*G*DCLEHQL*KPRNSRPLRLTPLLNYSYHYQAHYV*QLEI*AH*KH  615
                KRKGICKCSHQTYKS T**NAPLWEY*YSGTGLKTVHQN KCLE+TSTHQVYSL LALRILVS A*CTSL*G*DCLEH L*KPRNSRPLRLTPLLNYSYHYQAHYV*QLEI* H*KH
Subject    876  KRKGICKCSHQTYKS*T**NAPLWEY*YSGTGLKTVHQNPKCLERTSTHQVYSLCLALRILVSKA*CTSL*G*DCLEHPL*KPRNSRPLRLTPLLNYSYHYQAHYV*QLEI*VH*KH  1226

Range 5: 688 to 897 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
154.6 bits(331) 0.0 70/70(100%) 0/70(0%) Plus/Minus
Query      594  NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEIEHLILCLFLTRNLTQL*CASTSSSVIIS  803
                NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEIEHLILCLFLTRNLTQL*CASTSSSVIIS
Subject    688  NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEIEHLILCLFLTRNLTQL*CASTSSSVIIS  897

Range 6: 1273 to 1461 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.0 bits(308) 0.0 62/63(98%) 0/63(0%) Plus/Minus
Query       30  AAM*NQCLSSGVGSLDFKRVTTLKVEPLTSHGNLNSELCATARSTASLPKHISTPSTSRVKGD  218
                AAM*NQCLSSGVGSLDFKRVTTLKVEP TSHGNLNSELCATARSTASLPKHISTPSTSRVKGD
Subject   1273  AAM*NQCLSSGVGSLDFKRVTTLKVEPRTSHGNLNSELCATARSTASLPKHISTPSTSRVKGD  1461

Range 7: 690 to 1313 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
422.2 bits(915) 0.0 198/208(95%) 0/208(0%) Minus/Plus
Query      178  K**QKRRWRHTTIV*GSWLGTSIK*GAQFQACLKWLIRP*VFGVVRVL*II*LKHCQPSSL*VFSVCSNFQLLYIVCLXXXXXXX*GS*SQRTRVSWLSQLVFQTVLTSQGGTSSITHQDAQCKGK*IYLMSTCLFKTFQVLMYCFQTRTRISVFPKRRISLSPRLVGLV*TLANTFPLSVSKLAATGWTTSLWDRPSL*MLRGC*YV  801
                K**QKRRWRHTTIV*GSWLGTSI+*GAQFQACLKWLIRP*VFGVVRVL*II*LKH QPSSL*VFSV SNFQLLYIVCLVVVRVV**GS*SQRTRVSWLSQ VFQTVLTSQGGTSS+THQDAQCK K*IYLMSTC FKTF+VLMYCFQTRTRISVFPKRRISLS RLVGLV*TLANTFPLSVSKLAATGWTTSLWDRPSL*ML+GC*YV
Subject    690  K**QKRRWRHTTIV*GSWLGTSIR*GAQFQACLKWLIRP*VFGVVRVL*II*LKHYQPSSL*VFSVYSNFQLLYIVCLVVVRVV**GS*SQRTRVSWLSQRVFQTVLTSQGGTSSLTHQDAQCKAK*IYLMSTCPFKTFRVLMYCFQTRTRISVFPKRRISLSLRLVGLV*TLANTFPLSVSKLAATGWTTSLWDRPSL*MLKGC*YV  1313

Range 8: 1356 to 1463 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.2 bits(173) 0.0 34/36(94%) 0/36(0%) Minus/Plus
Query       28  NSSCRVRLEVQPSMW*PF*NQETQPQRTGTGFTSLP  135
                NSS RVR EVQPSMW*PF*NQETQPQRTGTGFTSLP
Subject   1356  NSSYRVRFEVQPSMW*PF*NQETQPQRTGTGFTSLP  1463

Range 9: 949 to 1224 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
210.5 bits(453) 0.0 90/92(98%) 0/92(0%) Plus/Minus
Query      267  EERYLQVFTPNLQVLDLMKCASLGILIFWYGSENSTSKPEMS*TDKYSSSIFTFPCTAHPGE*CLMYLPVRLGLSGTPAVKATKLSSSEINS  542
                EERYLQVFTPNLQVLDLMKCASLGILIFWYGSENSTSKPEMS*TDKYSSSIFT PCTAHPGE* LMYLPVRLGLSGTPAVKATKLSSSEINS
Subject    949  EERYLQVFTPNLQVLDLMKCASLGILIFWYGSENSTSKPEMS*TDKYSSSIFTLPCTAHPGE*GLMYLPVRLGLSGTPAVKATKLSSSEINS  1224

Range 10: 1284 to 1460 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
136.2 bits(291) 0.0 56/59(95%) 0/59(0%) Plus/Minus
Query       31  QRCKTSACPLGLGLLISKGLPH*RLNL*PHTAT*IQSCAQQRDLPPPCQNISAPPQHLE  207
                QRCKTSACPLGLGLLISKGLPH*RLNL PHT T*IQSCAQQRDLPPPCQNISAP QHLE
Subject   1284  QRCKTSACPLGLGLLISKGLPH*RLNLEPHTVT*IQSCAQQRDLPPPCQNISAPLQHLE  1460

Range 11: 690 to 842 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.4 bits(263) 0.0 50/51(98%) 0/51(0%) Plus/Minus
Query      649  NYS*YSNNAKYLRPNQPLQTGLKLSTSFYACS*PGTSHNCSVPPPPLLSSF  801
                NYS*YSNNAKYLRPNQPLQTGLKLSTS YACS*PGTSHNCSVPPPPLLSSF
Subject    690  NYS*YSNNAKYLRPNQPLQTGLKLSTSSYACS*PGTSHNCSVPPPPLLSSF  842

Grapevine rupestris stem pitting associated virus complete genome, genomic RNA, isolate GRSPaV MG

Sequence ID: FR691076.1 Length: 8749 Number of Matches: 11

Range 1: 6433 to 7206 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
605.4 bits(1315) 0.0 253/258(98%) 0/258(0%) Minus/Plus
Query       29  EMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKHYSPGCAVQGKVNILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAA  802
                EMMTEEEVEAHYNCVRFLVRNKHKMRC ISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFP+VIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIK YSPGCAVQGKVNILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSP TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPED+HWFYIAA
Subject   6433  EMMTEEEVEAHYNCVRFLVRNKHKMRCLISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPIVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKVNILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPLTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDKHWFYIAA  7206

Range 2: 6432 to 7205 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
566.0 bits(1229) 0.0 242/258(94%) 0/258(0%) Minus/Plus
Query       30  *NDDRRGGGGTLQLCEVPG*EQA*NEVLNFRPV*SG*LGLKYLALFEYYE*FS*SIVSLRVYRCFQCAQISSCYT*CAW*W*E*FNKGVNLRGREFRGFHSWCSRQS*PHREVHQALLTRMRSARESEYT**VLVCSRHFRF*CTVFRPVPEYQYSQRGAFH*VQDL*VWCEHLQIPFLFRFQS*QRRAGRRHCGIALHSRC*GGADMFWQGGGRSRCCAQL*IQVAV*G*RFNLQCGNPFEIKRPNPRGQALVLHRC  803
                *+DDRRGGGGTLQLCEVPG*EQA*+EV NFRPV*SG*LGLKYLALFEYYE*FS*SI+SLRVYRCFQCA IS+CYT*CAW*W*E*FNKGVNLRGREFRGFHS CSRQS*PHREVHQALLTRMRSAR+SEYT**VLV SRHF F*CTVFRPVPEYQYSQRGAFH*VQDL*VWCEHLQIPFLFRFQS* RRAGRRHCGI  HSRC* GADMFWQGGGRSRCC QL*IQVAV*G RFNLQCGNPFEIKRPNPRGQALVLHRC
Subject   6432  *DDDRRGGGGTLQLCEVPG*EQA*DEVSNFRPV*SG*LGLKYLALFEYYE*FS*SIISLRVYRCFQCA*ISNCYT*CAW*W*E*FNKGVNLRGREFRGFHSRCSRQS*PHREVHQALLTRMRSARKSEYT**VLVRSRHFGF*CTVFRPVPEYQYSQRGAFH*VQDL*VWCEHLQIPFLFRFQS**RRAGRRHCGITPHSRC*RGADMFWQGGGRSRCCTQL*IQVAV*GSRFNLQCGNPFEIKRPNPRGQALVLHRC  7205

Range 3: 6436 to 7206 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
549.1 bits(1192) 0.0 243/257(95%) 0/257(0%) Plus/Minus
Query       29  GSDVKPVPVLWGWVS*FQKGYHIEG*TSNLTRQLEFRVVRNSEIYRLLAKTYQHPLNI*SEGRSHNDVVQPVAANFETERGKVFASVHTKPTSLGLNEMRLFGNTDILVRV*KQYIKT*NVLNRQVLIKYIHFPLHCASW*VMLDVPPCEVRTVWNTSCESHETLVL*D*LPYXXXXXXXXXXMYNNWKFEHTENTYKLEG*QCFN*IIHNTRTTPNT*GLINHFKQA*N*APHFMLVPNQEPHTIVVCLHLLFCHH  799
                GSDVKPV VLWGWVS*FQKGYHIEG*TSNLTRQLEFRVV NSEIYRLLAKTYQHP NI*SEG SHNDVVQPVA NFETERGKVFASVHTKPTSLGLNEMRLFGNTDILVRV*KQYIKT NVLN QVLIKYIHF LHCASW*V LDVPPCEVRTVWNT CESHETLVL*D*LPY*TTLTTTRHTMYNNWKF+HTENTYKLEG* CFN*IIHNTRTTPNT*GLINHFKQA*N* PH MLVPNQEPHTIVVCLHLLFCHH
Subject   6436  GSDVKPVLVLWGWVS*FQKGYHIEG*TSNLTRQLEFRVVCNSEIYRLLAKTYQHPFNI*SEG*SHNDVVQPVATNFETERGKVFASVHTKPTSLGLNEMRLFGNTDILVRV*KQYIKTRNVLNGQVLIKYIHFSLHCASW*VRLDVPPCEVRTVWNTCCESHETLVL*D*LPY*TTLTTTRHTMYNNWKFKHTENTYKLEG**CFN*IIHNTRTTPNT*GLINHFKQA*N*TPHLMLVPNQEPHTIVVCLHLLFCHH  7206

Range 4: 6620 to 6970 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
262.7 bits(567) 0.0 112/117(96%) 0/117(0%) Plus/Minus
Query      265  KRKGICKCSHQTYKSWT**NAPLWEY*YSGTGLKTVHQNLKCLEQTSTHQVYSLSLALRILVSNA*CTSL*G*DCLEHQL*KPRNSRPLRLTPLLNYSYHYQAHYV*QLEI*AH*KH  615
                KRKGICKCSHQTYKSWT**NAPLWEY*YSGTGLKTVHQN KCLE+TSTHQVYSL LALRILVS A*CTSL*G*DCLEH L*KPRNSRPLRLTPLLNYSYHYQAHYV*QLEI*AH*KH
Subject   6620  KRKGICKCSHQTYKSWT**NAPLWEY*YSGTGLKTVHQNPKCLERTSTHQVYSLFLALRILVSKA*CTSL*G*DCLEHLL*KPRNSRPLRLTPLLNYSYHYQAHYV*QLEI*AH*KH  6970

Range 5: 6432 to 6641 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
152.3 bits(326) 0.0 69/70(99%) 0/70(0%) Plus/Minus
Query      594  NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEIEHLILCLFLTRNLTQL*CASTSSSVIIS  803
                NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEI HLILCLFLTRNLTQL*CASTSSSVIIS
Subject   6432  NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEIRHLILCLFLTRNLTQL*CASTSSSVIIS  6641

Range 6: 7017 to 7205 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
142.7 bits(305) 0.0 61/63(97%) 0/63(0%) Plus/Minus
Query       30  AAM*NQCLSSGVGSLDFKRVTTLKVEPLTSHGNLNSELCATARSTASLPKHISTPSTSRVKGD  218
                AAM*NQCLSSGVGSLDFKRVTTLKVEP TSHGNLNSELCATARSTASLPKHISTPSTSRV+GD
Subject   7017  AAM*NQCLSSGVGSLDFKRVTTLKVEPRTSHGNLNSELCATARSTASLPKHISTPSTSRVRGD  7205

Range 7: 6434 to 7057 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
416.7 bits(903) 0.0 194/208(93%) 0/208(0%) Minus/Plus
Query      178  K**QKRRWRHTTIV*GSWLGTSIK*GAQFQACLKWLIRP*VFGVVRVL*II*LKHCQPSSL*VFSVCSNFQLLYIVCLXXXXXXX*GS*SQRTRVSWLSQLVFQTVLTSQGGTSSITHQDAQCKGK*IYLMSTCLFKTFQVLMYCFQTRTRISVFPKRRISLSPRLVGLV*TLANTFPLSVSKLAATGWTTSLWDRPSL*MLRGC*YV  801
                +**QKRRWRHTTIV*GSWLGTSI+*G  FQACLKWLIRP*VFGVVRVL*II*LKH QPSSL*VFSVC NFQLLYIVCLVVVRVV**GS*SQRTRVSWLSQ VFQTVLTSQGGTSS+THQDAQCK K*IYLMSTC FKTF+VLMYCFQTRTRISVFPKRRISLSPRLVGLV*TLANTFPLSVSKL ATGWTTSLWD PSL*ML+GC*YV
Subject   6434  R**QKRRWRHTTIV*GSWLGTSIR*GV*FQACLKWLIRP*VFGVVRVL*II*LKHYQPSSL*VFSVCLNFQLLYIVCLVVVRVV**GS*SQRTRVSWLSQQVFQTVLTSQGGTSSLTHQDAQCKEK*IYLMSTCPFKTFRVLMYCFQTRTRISVFPKRRISLSPRLVGLV*TLANTFPLSVSKLVATGWTTSLWDHPSL*MLKGC*YV  7057

Range 8: 7100 to 7207 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.5 bits(178) 0.0 34/36(94%) 0/36(0%) Minus/Plus
Query       28  NSSCRVRLEVQPSMW*PF*NQETQPQRTGTGFTSLP  135
                NSSCRVR EVQPSMW*PF*NQETQPQRT TGFTSLP
Subject   7100  NSSCRVRFEVQPSMW*PF*NQETQPQRTSTGFTSLP  7207

Range 9: 6693 to 6968 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
213.2 bits(459) 0.0 91/92(99%) 0/92(0%) Plus/Minus
Query      267  EERYLQVFTPNLQVLDLMKCASLGILIFWYGSENSTSKPEMS*TDKYSSSIFTFPCTAHPGE*CLMYLPVRLGLSGTPAVKATKLSSSEINS  542
                EERYLQVFTPNLQVLDLMKCASLGILIFWYGSENSTSKPEMS*TDKYSSSIFTFPCTAHPGE* LMYLPVRLGLSGTPAVKATKLSSSEINS
Subject   6693  EERYLQVFTPNLQVLDLMKCASLGILIFWYGSENSTSKPEMS*TDKYSSSIFTFPCTAHPGE*GLMYLPVRLGLSGTPAVKATKLSSSEINS  6968

Range 10: 7028 to 7204 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
136.2 bits(291) 0.0 56/59(95%) 0/59(0%) Plus/Minus
Query       31  QRCKTSACPLGLGLLISKGLPH*RLNL*PHTAT*IQSCAQQRDLPPPCQNISAPPQHLE  207
                QRCKTSACPLGLGLLISKGLPH*RLNL PHTAT*IQSC QQRDLPPPCQNISAP QHLE
Subject   7028  QRCKTSACPLGLGLLISKGLPH*RLNLEPHTAT*IQSCVQQRDLPPPCQNISAPLQHLE  7204

Range 11: 6437 to 6586 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.8 bits(253) 0.0 48/50(96%) 0/50(0%) Plus/Minus
Query      649  NYS*YSNNAKYLRPNQPLQTGLKLSTSFYACS*PGTSHNCSVPPPPLLSS  798
                NYS*YSNNAKYLRPNQPLQTGLKL TS YACS*PGTSHNCSVPPPPLLSS
Subject   6437  NYS*YSNNAKYLRPNQPLQTGLKLDTSSYACS*PGTSHNCSVPPPPLLSS  6586

Grapevine rupestris stem pitting associated virus isolate SK704 C, complete genome

Sequence ID: KX274276.1 Length: 8726 Number of Matches: 11

Range 1: 6434 to 7207 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
600.4 bits(1304) 0.0 250/258(97%) 0/258(0%) Minus/Plus
Query       29  EMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKHYSPGCAVQGKVNILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAA  802
                EMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFE VD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDE+FVAFTAGVPDSPNLTGRYIK YSPGC VQGKVNILDEYLSVQDISGFDVLFSDPYQN SIPKEAHFIKSKTCRFG NTCKYLSSFGFKVSSDGLD+VIVGSPFTLDVEGVLICFGKEAVDLAVAHNS+FKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAA
Subject   6434  EMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFVAFTAGVPDSPNLTGRYIKAYSPGCVVQGKVNILDEYLSVQDISGFDVLFSDPYQNTSIPKEAHFIKSKTCRFGANTCKYLSSFGFKVSSDGLDEVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAA  7207

Range 2: 6433 to 7206 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
512.0 bits(1111) 0.0 219/258(85%) 0/258(0%) Minus/Plus
Query       30  *NDDRRGGGGTLQLCEVPG*EQA*NEVLNFRPV*SG*LGLKYLALFEYYE*FS*SIVSLRVYRCFQCAQISSCYT*CAW*W*E*FNKGVNLRGREFRGFHSWCSRQS*PHREVHQALLTRMRSARESEYT**VLVCSRHFRF*CTVFRPVPEYQYSQRGAFH*VQDL*VWCEHLQIPFLFRFQS*QRRAGRRHCGIALHSRC*GGADMFWQGGGRSRCCAQL*IQVAV*G*RFNLQCGNPFEIKRPNPRGQALVLHRC  803
                *NDDR  GGGTLQLCEVP  EQA*NEVLNFRP+*S *LGLKYLALFEYYE*FS*SI+S  VYRCFQCAQISSCYT*CAW W*E*FNKGVNLRGREFRGFH  CSRQS* HR+VHQ LL+RMRSA E EYT**V V SRHF F*CTVFR VPEYQYSQRGAFH*VQDL VWC+HLQIPFLFRFQS*QRR GR + G+ LHSRC*GGADM WQGGGR RCCAQL* QVAV*  RFN QCGNP EIK PNPRGQ LVLHRC
Subject   6433  *NDDRGRGGGTLQLCEVPSEEQA*NEVLNFRPI*SS*LGLKYLALFEYYE*FS*SIISF*VYRCFQCAQISSCYT*CAWQW*E*FNKGVNLRGREFRGFHGRCSRQS*SHRKVHQGLLSRMRSAGEGEYT**VFVRSRHFGF*CTVFRSVPEYQYSQRGAFH*VQDLQVWCKHLQIPFLFRFQS*QRRVGRSYRGVTLHSRC*GGADMLWQGGGRPRCCAQL*FQVAV*SSRFNFQCGNPLEIKGPNPRGQTLVLHRC  7206

Range 3: 6434 to 7207 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
486.3 bits(1055) 0.0 218/258(84%) 0/258(0%) Plus/Minus
Query       29  GSDVKPVPVLWGWVS*FQKGYHIEG*TSNLTRQLEFRVVRNSEIYRLLAKTYQHPLNI*SEGRSHNDVVQPVAANFETERGKVFASVHTKPTSLGLNEMRLFGNTDILVRV*KQYIKT*NVLNRQVLIKYIHFPLHCASW*VMLDVPPCEVRTVWNTSCESHETLVL*D*LPYXXXXXXXXXXMYNNWKFEHTENTYKLEG*QCFN*IIHNTRTTPNT*GLINHFKQA*N*APHFMLVPNQEPHTIVVCLHLLFCHHF  802
                GSDVKPV VLWGWV *FQ+GYHIE *TSN TRQLE RVVRNSE+YRLLAK YQHPLNI*SEG  H++ VQPVAANFETERGKVFASV TKP  LGLNEMRLFGNT ILVR+*KQYIKT NVLN Q+LIKYIH PLH ASW V LDVP CE+RTVWNT  ESHE LVL*D*LPY*TTLTT RHTMYNNWKFEHTENTYKL+ * CFN*IIHNTRTTPNT*GLIN FK A*N*APHFMLVP+ EPHTIVVCLHL  CHHF
Subject   6434  GSDVKPVSVLWGWVP*FQEGYHIES*TSNFTRQLEIRVVRNSEVYRLLAKAYQHPLNI*SEG*PHDNFVQPVAANFETERGKVFASVCTKPAGLGLNEMRLFGNTGILVRI*KQYIKTRNVLNGQILIKYIHLPLHYASWRVSLDVPSCEIRTVWNTCRESHEILVL*D*LPY*TTLTTARHTMYNNWKFEHTENTYKLKS**CFN*IIHNTRTTPNT*GLINCFK*A*N*APHFMLVPH*EPHTIVVCLHLFLCHHF  7207

Range 4: 6621 to 6971 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
225.6 bits(486) 0.0 99/117(85%) 0/117(0%) Plus/Minus
Query      265  KRKGICKCSHQTYKSWT**NAPLWEY*YSGTGLKTVHQNLKCLEQTSTHQVYSLSLALRILVSNA*CTSL*G*DCLEHQL*KPRNSRPLRLTPLLNYSYHYQAHYV*QLEI*AH*KH  615
                KRKGICKC HQT +SWT**NAPLWEY YSGT LKTVHQN KCLE+T+THQVYS S ALRIL S  *CT L* *DCLEH  *KPRNSRPLRLTPLLNYSYH QAHYV*QLEI*AH*KH
Subject   6621  KRKGICKCLHQTCRSWT**NAPLWEYWYSGTDLKTVHQNPKCLERTNTHQVYSPSPALRILESKP*CTFL*D*DCLEHLP*KPRNSRPLRLTPLLNYSYHCQAHYV*QLEI*AH*KH  6971

Range 5: 6433 to 6642 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
152.3 bits(326) 0.0 69/70(99%) 0/70(0%) Plus/Minus
Query      594  NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEIEHLILCLFLTRNLTQL*CASTSSSVIIS  803
                NLSTLKTPINSKADNALTKLFIILEQRQILKA*ST SNRPEIEHLILCLFLTRNLTQL*CASTSSSVIIS
Subject   6433  NLSTLKTPINSKADNALTKLFIILEQRQILKA*STASNRPEIEHLILCLFLTRNLTQL*CASTSSSVIIS  6642

Range 6: 7018 to 7206 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
141.3 bits(302) 0.0 61/63(97%) 0/63(0%) Plus/Minus
Query       30  AAM*NQCLSSGVGSLDFKRVTTLKVEPLTSHGNLNSELCATARSTASLPKHISTPSTSRVKGD  218
                AAM*NQCLSSGVGSLDFKRVTTLKVEP TSHGNL SELCATARSTASLPKHISTPSTSRVKGD
Subject   7018  AAM*NQCLSSGVGSLDFKRVTTLKVEPRTSHGNLKSELCATARSTASLPKHISTPSTSRVKGD  7206

Range 7: 6435 to 7055 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
352.1 bits(762) 0.0 173/207(84%) 0/207(0%) Minus/Plus
Query      181  K**QKRRWRHTTIV*GSWLGTSIK*GAQFQACLKWLIRP*VFGVVRVL*II*LKHCQPSSL*VFSVCSNFQLLYIVCLXXXXXXX*GS*SQRTRVSWLSQLVFQTVLTSQGGTSSITHQDAQCKGK*IYLMSTCLFKTFQVLMYCFQTRTRISVFPKRRISLSPRLVGLV*TLANTFPLSVSKLAATGWTTSLWDRPSL*MLRGC*Y  801
                K**Q++RWRHTTIV*GS  GTSIK*GAQFQA LK LIRP*VFGVVRVL*II*LKH Q  SL*VFSVCSNFQLLYIVCL VVRVV**GS*SQRTR+SWLS+ VFQTVL SQ GTS +T QDA C+G+*IYLMS C FKTF+VLMYCFQ RTRI VFPKRRISLSPR  GLV TLANTFPLSVSKLAATGWT   W  PSL*MLRGC*Y
Subject   6435  K**QRKRWRHTTIV*GS**GTSIK*GAQFQAYLKQLIRP*VFGVVRVL*II*LKHYQLLSL*VFSVCSNFQLLYIVCLAVVRVV**GS*SQRTRISWLSRQVFQTVLISQEGTSRLTLQDA*CRGR*IYLMSICPFKTFRVLMYCFQIRTRIPVFPKRRISLSPRPAGLVQTLANTFPLSVSKLAATGWTKLSWGHPSL*MLRGC*Y  7055

Range 8: 7104 to 7208 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.4 bits(143) 0.0 29/35(83%) 0/35(0%) Minus/Plus
Query       28  SSCRVRLEVQPSMW*PF*NQETQPQRTGTGFTSLP  132
                SSCRV+ EVQ SMW*P *NQ TQPQRT TGFTSLP
Subject   7104  SSCRVKFEVQLSMW*PS*NQGTQPQRTDTGFTSLP  7208

Range 9: 6694 to 6969 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
208.2 bits(448) 0.0 87/92(95%) 0/92(0%) Plus/Minus
Query      267  EERYLQVFTPNLQVLDLMKCASLGILIFWYGSENSTSKPEMS*TDKYSSSIFTFPCTAHPGE*CLMYLPVRLGLSGTPAVKATKLSSSEINS  542
                EERYLQVF PNLQVLDLMKCASLGIL+FWYGSENSTSKPEMS*TDKYSSSIFTFPCT HPGE* LMYLPVRLGLSGTPAVKATK SSSEINS
Subject   6694  EERYLQVFAPNLQVLDLMKCASLGILVFWYGSENSTSKPEMS*TDKYSSSIFTFPCTTHPGE*ALMYLPVRLGLSGTPAVKATKFSSSEINS  6969

Range 10: 7029 to 7205 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
121.6 bits(259) 0.0 50/59(85%) 0/59(0%) Plus/Minus
Query       31  QRCKTSACPLGLGLLISKGLPH*RLNL*PHTAT*IQSCAQQRDLPPPCQNISAPPQHLE  207
                QRCKTS CPLGLG LIS+GLPH*+LNL  HTAT* QSCAQQR LPPPCQ+ISAPPQHLE
Subject   7029  QRCKTSVCPLGLGPLISRGLPH*KLNLELHTAT*NQSCAQQRGLPPPCQSISAPPQHLE  7205

Range 11: 6435 to 6587 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
105.1 bits(223) 0.0 45/51(88%) 0/51(0%) Plus/Minus
Query      649  NYS*YSNNAKYLRPNQPLQTGLKLSTSFYACS*PGTSHNCSVPPPPLLSSF  801
                NYS*YSNNAKYLRPNQ LQ GLKLSTSFYACS  GTSHNCSVPPP  LSSF
Subject   6435  NYS*YSNNAKYLRPNQLLQIGLKLSTSFYACSSLGTSHNCSVPPPLPLSSF  6587

Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome

Sequence ID: JX559646.1 Length: 8726 Number of Matches: 11

Range 1: 6433 to 7206 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
592.2 bits(1286) 0.0 247/258(96%) 0/258(0%) Minus/Plus
Query       29  EMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKHYSPGCAVQGKVNILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAA  802
                EMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFE VD*ALSIW C SIMNNLVKALS FEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIK YSPGCAVQGKVNILDEYLSVQDISGFDVL SDPYQN SIPKEAHFIKSKTCRFG NTCKYLSSFGFKVSS+GLD+VIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPED+HWFYIAA
Subject   6433  EMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAVD*ALSIWHCLSIMNNLVKALSTFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKVNILDEYLSVQDISGFDVLLSDPYQNTSIPKEAHFIKSKTCRFGANTCKYLSSFGFKVSSEGLDEVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDKHWFYIAA  7206

Range 2: 6435 to 7205 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
517.9 bits(1124) 0.0 221/257(86%) 0/257(0%) Minus/Plus
Query       30  NDDRRGGGGTLQLCEVPG*EQA*NEVLNFRPV*SG*LGLKYLALFEYYE*FS*SIVSLRVYRCFQCAQISSCYT*CAW*W*E*FNKGVNLRGREFRGFHSWCSRQS*PHREVHQALLTRMRSARESEYT**VLVCSRHFRF*CTVFRPVPEYQYSQRGAFH*VQDL*VWCEHLQIPFLFRFQS*QRRAGRRHCGIALHSRC*GGADMFWQGGGRSRCCAQL*IQVAV*G*RFNLQCGNPFEIKRPNPRGQALVLHRC  800
                NDDR GGGGTLQLCEVP *EQA*+EVLNFRP+*SG*LGLKYLALFEYYE*F *SIV+LR+YRCFQCA ISS YT*C W W*E*FNKGVNLRGREFRGFHS CSR S*PHR+VHQALL+RMRSARESEYT**V V  R+FR *CT FRPVP+YQYSQRGAFH VQDL*+WCEHLQIP LFRFQS*QRR GR +CG+ALHSRC* GA+MFWQGGGRSRCCAQL*IQVAV*  RFNLQCGNPFEIKR NPR QALVLH C
Subject   6435  NDDRGGGGGTLQLCEVPS*EQA*DEVLNFRPI*SG*LGLKYLALFEYYE*FG*SIVNLRIYRCFQCA*ISSRYT*CTWQW*E*FNKGVNLRGREFRGFHSRCSR*S*PHRKVHQALLSRMRSARESEYT**VFVRPRYFRL*CTAFRPVPKYQYSQRGAFHKVQDL*IWCEHLQIPLLFRFQS*QRRIGRSYCGVALHSRC*RGANMFWQGGGRSRCCAQL*IQVAV*SSRFNLQCGNPFEIKRSNPRRQALVLHCC  7205

Range 3: 6433 to 7206 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
494.6 bits(1073) 0.0 217/258(84%) 0/258(0%) Plus/Minus
Query       29  GSDVKPVPVLWGWVS*FQKGYHIEG*TSNLTRQLEFRVVRNSEIYRLLAKTYQHPLNI*SEGRSHNDVVQPVAANFETERGKVFASVHTKPTSLGLNEMRLFGNTDILVRV*KQYIKT*NVLNRQVLIKYIHFPLHCASW*VMLDVPPCEVRTVWNTSCESHETLVL*D*LPYXXXXXXXXXXMYNNWKFEHTENTYKLEG*QCFN*IIHNTRTTPNT*GLINHFKQA*N*APHFMLVPNQEPHTIVVCLHLLFCHHF  802
                GS+VKPV V WGW+S*FQKGYHIEG*TSN TRQLEFRVVRNSEIYRLLAKTY HP NI*SEGR HN+ VQ  AANFETERG+VFASV TK T LGL EMRLFGNT ILVRV*KQYIK *N+L+ Q+LIKYIHFPLHCASW V LDVP CEVRT+WNT CESHETLVL*D*LPY*TTLTT R+TMYN+WKF+HTENTYK EG*QCFN IIHNT+T PNT*GLIN FK A*N*APH MLVPN EPHTIVVCLHLL CHHF
Subject   6433  GSNVKPVLVFWGWIS*FQKGYHIEG*TSNFTRQLEFRVVRNSEIYRLLAKTY*HPFNI*SEGRPHNNFVQSFAANFETERGEVFASVRTKSTGLGLYEMRLFGNTGILVRV*KQYIKA*NILDGQILIKYIHFPLHCASWRVRLDVPSCEVRTIWNTCCESHETLVL*D*LPY*TTLTTARYTMYNDWKFKHTENTYKFEG*QCFNQIIHNTQTMPNT*GLINRFK*A*N*APHLMLVPN*EPHTIVVCLHLLLCHHF  7206

Range 4: 6620 to 6970 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
223.3 bits(481) 0.0 97/117(83%) 0/117(0%) Plus/Minus
Query      265  KRKGICKCSHQTYKSWT**NAPLWEY*YSGTGLKTVHQNLKCLEQTSTHQVYSLSLALRILVSNA*CTSL*G*DCLEHQL*KPRNSRPLRLTPLLNYSYHYQAHYV*QLEI*AH*KH  615
                KR+GICKCSHQ Y+SWT *NAPLWEY Y GTGLK VHQ+LK L +T+THQVYSLSLALRIL S A*CT L*G*D LEH L*KPRNSRPLRLTPLLNYSYH Q HYV*+LEI*AH*KH
Subject   6620  KRRGICKCSHQIYRSWTL*NAPLWEYWYFGTGLKAVHQSLKYLGRTNTHQVYSLSLALRILESKA*CTFL*G*DYLEHLL*KPRNSRPLRLTPLLNYSYHCQVHYV*RLEI*AH*KH  6970

Range 5: 6432 to 6641 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.9 bits(310) 0.0 66/70(94%) 0/70(0%) Plus/Minus
Query      594  NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEIEHLILCLFLTRNLTQL*CASTSSSVIIS  803
                NLSTLKTPINSK DNALTKLFIIL+Q QILKA*ST SNRPEIEHLILCLFLTRNLTQL*CASTSSSVIIS
Subject   6432  NLSTLKTPINSKVDNALTKLFIILKQCQILKA*STASNRPEIEHLILCLFLTRNLTQL*CASTSSSVIIS  6641

Range 6: 7017 to 7205 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.0 bits(308) 0.0 62/63(98%) 0/63(0%) Plus/Minus
Query       30  AAM*NQCLSSGVGSLDFKRVTTLKVEPLTSHGNLNSELCATARSTASLPKHISTPSTSRVKGD  218
                AAM*NQCLSSGVGSLDFKRVTTLKVEP TSHGNLNSELCATARSTASLPKHISTPSTSRVKGD
Subject   7017  AAM*NQCLSSGVGSLDFKRVTTLKVEPRTSHGNLNSELCATARSTASLPKHISTPSTSRVKGD  7205

Range 7: 6434 to 7057 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
346.1 bits(749) 0.0 172/208(83%) 0/208(0%) Minus/Plus
Query      178  K**QKRRWRHTTIV*GSWLGTSIK*GAQFQACLKWLIRP*VFGVVRVL*II*LKHCQPSSL*VFSVCSNFQLLYIVCLXXXXXXX*GS*SQRTRVSWLSQLVFQTVLTSQGGTSSITHQDAQCKGK*IYLMSTCLFKTFQVLMYCFQTRTRISVFPKRRISLSPRLVGLV*TLANTFPLSVSKLAATGWTTSLWDRPSL*MLRGC*YV  801
                K**Q+RRWRHTTIV*GS LGTSI+*GAQFQA LK LIRP*VFG+V VL*II LKHCQPS+L*VFSVC NFQ LYIV L VVRVV**GS*SQRTRVSWLSQ VFQ VLTSQ GTSS+T QDAQCKGK*IYLMS C  K FQ LMYCFQTRT+I VFPKRRIS SPR V LV TLANT PLSVSKLAA  WT  LW RPSL*ML+GC*YV
Subject   6434  K**QRRRWRHTTIV*GS*LGTSIR*GAQFQAYLKRLIRP*VFGIV*VL*IIWLKHCQPSNL*VFSVCLNFQSLYIVYLAVVRVV**GS*SQRTRVSWLSQQVFQIVLTSQEGTSSLTLQDAQCKGK*IYLMSICPSKIFQALMYCFQTRTKIPVFPKRRIS*SPRPVDLVRTLANTSPLSVSKLAAKDWTKLLWGRPSL*MLKGC*YV  7057

Range 8: 7100 to 7207 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.2 bits(160) 0.0 30/36(83%) 0/36(0%) Minus/Plus
Query       28  NSSCRVRLEVQPSMW*PF*NQETQPQRTGTGFTSLP  135
                NSSCRV+ EVQPSMW*PF*NQE QPQ+T TGFT LP
Subject   7100  NSSCRVKFEVQPSMW*PF*NQEIQPQKTSTGFTLLP  7207

Range 9: 6693 to 6968 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
202.2 bits(435) 0.0 85/92(92%) 0/92(0%) Plus/Minus
Query      267  EERYLQVFTPNLQVLDLMKCASLGILIFWYGSENSTSKPEMS*TDKYSSSIFTFPCTAHPGE*CLMYLPVRLGLSGTPAVKATKLSSSEINS  542
                EERYLQVF PNLQVLD MKCASLGIL+FWYGSE+STSKPE+S TDKYSSSIFTFPCTAHPGE* LMYLPVRLGLSGTPAVKATKLSSSEINS
Subject   6693  EERYLQVFAPNLQVLDFMKCASLGILVFWYGSESSTSKPEISWTDKYSSSIFTFPCTAHPGE*GLMYLPVRLGLSGTPAVKATKLSSSEINS  6968

Range 10: 7028 to 7204 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
121.1 bits(258) 0.0 52/59(88%) 0/59(0%) Plus/Minus
Query       31  QRCKTSACPLGLGLLISKGLPH*RLNL*PHTAT*IQSCAQQRDLPPPCQNISAPPQHLE  207
                Q+CKTSAC LGL LLISKGLPH*RLNL  HTAT*IQSCAQQRDLPPPCQNI AP QHLE
Subject   7028  QQCKTSACLLGLDLLISKGLPH*RLNLELHTAT*IQSCAQQRDLPPPCQNILAPLQHLE  7204

Range 11: 6434 to 6586 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.9 bits(240) 0.0 47/51(92%) 0/51(0%) Plus/Minus
Query      649  NYS*YSNNAKYLRPNQPLQTGLKLSTSFYACS*PGTSHNCSVPPPPLLSSF  801
                NYS*YSNNAKYLRPNQPLQ GLKLSTS YACS* GTSHNCSVPPPP LSSF
Subject   6434  NYS*YSNNAKYLRPNQPLQIGLKLSTSSYACS*LGTSHNCSVPPPPPLSSF  6586

Nucleotide Sequence (2000 letters)

Query ID:ds2016-132_4
Query definition:No definition line
Query length:951
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 16 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
200
400
600
800
1000
1200
1400
1600
1800
2000

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome

Sequence ID: KR054734.1 Length: 8753 Number of Matches: 8

Range 1: 2965 to 4935 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1555.3 bits(3388) 0.0 651/657(99%) 0/657(0%) Minus/Plus
Query        1  VSKLLDVPRSKKQSIIVLEGALAIDTSYGPKVLGSFEVFKGDFNIKKIEDGSIFVISYKAPVRSSGKLRVHKTECSFSGSKEVLLGCQIEASADYDIDDFNKFPVPGDGNCFWHSVGFLLSTDGLALKAGISSFVESESLVDPSLSAQTVLRQLSDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPGGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRRVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSDIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKIANLKAGHCVIFDEVQLFPPGYIDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKYGGVLISHDSFHTDDRRWMTALSRFSHNLDLVNITGISVE  1971
                +SKLLDVPRSKKQSIIVLEGALAIDTSYGPKVLGSFE+FKGDFNIKKIEDGSIFVISYKAPVRSSGKLRVHKTECSFSGSKEVLLGCQIEASADYDIDDFNKFPVPGDGNCFWHSVGFLLSTDGLALKAGI SFVESESLVDPSLSAQTVLRQLSDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPGGRMSALFDITNEHIRHVEKIGNGPQSIKVDELR+VKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSDIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKIANLKAGHCVIFDEVQLFPPGYIDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFK+GGVLISHDSFHTDDRRW+TALSRFSHNLDLVNITGISVE
Subject   2965  LSKLLDVPRSKKQSIIVLEGALAIDTSYGPKVLGSFELFKGDFNIKKIEDGSIFVISYKAPVRSSGKLRVHKTECSFSGSKEVLLGCQIEASADYDIDDFNKFPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESLVDPSLSAQTVLRQLSDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPGGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSDIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKIANLKAGHCVIFDEVQLFPPGYIDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGVLISHDSFHTDDRRWLTALSRFSHNLDLVNITGISVE  4935

Range 2: 2971 to 4935 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1426.5 bits(3107) 0.0 616/655(94%) 0/655(0%) Plus/Minus
Query        1  FHADASNVYQVQVVAKAR*GRHPSTVISVE*VM*N*NSTIFEV*PC*FAKS*CELLHAKVRLHNLLLLKA*NQNRI*GGLRPSQKEVMHVVEDGIISECCSHGALLEMTWQSGLKHWIHKPPTLNVVPVGLTLK*SQYITLLSPQYCAILLGVICALTGITSK*NESITSYGQQTKVNIAWREQLNLIKNDAMACLQVCNFPKKHFKGHNVPTFFF*FTSLCHFATIIHFQVSFN*IG*SPSG*NKGYEFAFRPLHKALVQKAFTSSKGAKHDCQLSRFDIRS*YS*EPWLGIVKLLITYHTS*AS*QTPLQLFSPFKTWKVSYL*SIH*KEVKSRSFHSSQLIHLYTLRAVANLLNMSYMFVGYVK*S*HAPARIDDLNLPIDITLSTNVKCFESLSEIHHV*ATTLTQLFKYVICGGPAQIVKNIHFTSTKRRGDSCDHAAIQWSTRLKMI*LQA*DSTQRPLAISKLPTHLIFWGDND*PHMMPNAE*GYHFVLCISIITELPQNGLG*QRWIYKRFTFNERTYACFQSKPICTQQETH*MPKTVTITRYREFVKVINVIISRGFDLTTEQHFLGSRKRALRLVNSQLARRSHRSLVRYHEYGTIFNLLNVKVPFEHLERSQNLWSITGVDRKRAFKNYY*LLLTPRHI*QL  1965
                FHADASNV+QVQVVAKAR*GR P TVISVE*VM*N N T+FEV*PC*FAKS*CELLHAKVRLHNLLLLKA*NQNRI*GGLRPSQKEVMHVVED IIS+CCSHGALLEMTWQSGLKHWIHKPPTLNVVPVGLTLK*SQYITLLS QYCAILLGVICALTGITSK NESITSYG QTKVNIAWREQLNLIKNDAMACLQVCNFPKKHFKGHNVPTFFF*F SLCHFATIIHFQVSFN*I *SPSG*NKGYEFAFRPLHKALVQKAFTSSKGAKHDCQLSRFDIRS*YS*EPWLGIVKLLITYHTS*A *QTPLQLFSPFKTWKVSYL*SIH*KEVKSRSFH SQLIHLY LRAVANLLNMS M VGYVK*S*HAPAR+DDLNLPIDITLS NVKCFES SEIHHV  TTLTQLFKYVICGGPAQ+VKNIHFTST+RRGDSCDHAAI W TRLKMI*LQA*DSTQRPLAISKLPTHLIFWG+ND PHMMPNA+*GYHFVLCISIITELPQNGLG*QRWIYKRFTFNERTYACFQSKPICTQQETH*MPKTVTITRYREFVKVI+VIISRGFDLTT  HFLG RK ALRLVNSQLARRSHRSLVRYHEYG IFN LNVKVPFE L+RSQNLWSITGVDRKRAFKNYY*LLLTPRHI*QL
Subject   2971  FHADASNVHQVQVVAKAR*GRQPPTVISVE*VM*NQNPTMFEV*PC*FAKS*CELLHAKVRLHNLLLLKA*NQNRI*GGLRPSQKEVMHVVEDCIISKCCSHGALLEMTWQSGLKHWIHKPPTLNVVPVGLTLK*SQYITLLSSQYCAILLGVICALTGITSKRNESITSYG*QTKVNIAWREQLNLIKNDAMACLQVCNFPKKHFKGHNVPTFFF*FASLCHFATIIHFQVSFN*IC*SPSG*NKGYEFAFRPLHKALVQKAFTSSKGAKHDCQLSRFDIRS*YS*EPWLGIVKLLITYHTS*AP*QTPLQLFSPFKTWKVSYL*SIH*KEVKSRSFHFSQLIHLYALRAVANLLNMSNMLVGYVK*S*HAPARVDDLNLPIDITLSANVKCFESFSEIHHVQTTTLTQLFKYVICGGPAQVVKNIHFTSTERRGDSCDHAAI*WGTRLKMI*LQA*DSTQRPLAISKLPTHLIFWGNNDQPHMMPNAK*GYHFVLCISIITELPQNGLG*QRWIYKRFTFNERTYACFQSKPICTQQETH*MPKTVTITRYREFVKVIDVIISRGFDLTT**HFLGPRKGALRLVNSQLARRSHRSLVRYHEYGAIFNFLNVKVPFEQLKRSQNLWSITGVDRKRAFKNYY*LLLTPRHI*QL  4935

Range 3: 2966 to 4933 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1400.4 bits(3050) 0.0 616/656(94%) 0/656(0%) Plus/Minus
Query        3  PR*CQ*CLPSPSCG*SAIGPSSIYGHQCGMSHVKLKLHHI*SLTLLIRQKLV*VASCQSKTAXXXXXXXXXXXXXXRRS*TEPKGSHACCGRWHNQRMLQSWSPS*NDMAVWTQTLDSQTSDSQCCTCRTYPQVISIYHSAQPPVLRDPFGSHMCFDRDHQQVK*KHHFVWSTDKGQYSLEGTVEPHQK*RNGLPSGLQFS*ETLQRSQRPNLLFLIYQPLPLCNYHPFPSLF*LNWLEPFWVKQRLRICLQTSS*SSCTESFYQLQRCQARLSTLEI*YQKLIFLRAMAWNR*TXXXXXXXXXXXANTPAAFQPFQNLESKLSLIHSLKGGQEQIVSLFSAHPPLYSAGRCQSSQHVLYVRWLCQIELTCARQD**PQSPH*YHT*HKCQMLRKPQRDTSCLSHHLDTALQICDLWRACTDS*EHPLHVYQAQRR*L*SCSHSMEHKVENDLTASIRFHTEATRYLQTSNSPHILG***LASHDA*CRIRLSFRSLHKHYH*AASKRFGLTKMDLQEIHFQRKNLCLLSKQAHLYSTRNPLNAKNSYHHQVQGIC*SHQCHNQQRLRFDNRAALPWIQKKSTPSCELSTCQKISQEPCKISRIWNHLQSS*C*SPL*TPRKIPKPLVHNWCRSQARLQELLLIASYS*AHLATLI  1970
                PR*CQ*C PSPSCG*SAIGPS+ YGHQCGMSHVK K HH+*SLTLLIRQKLV*VASCQSKTAQSSSPQSLKPKSHLRRS*TEP+GSHACCGR HNQ+MLQSWSPS*NDMAVWTQTLDSQTSDSQCCTCRTYPQVISIYHSAQ PVLRDPFGSHMCFDRDHQQ K*KHHFVW TDKGQYSLEGTVEPHQK*RNGLPSGLQFS*ETLQRSQRPNLLFLI QPLPLCNYHPFPSLF*LN LEPFWVKQRLRICLQTSS*SSCTESFYQLQRCQARLSTLEI*YQKLIFLRAMAWNR*TSHHLSHQLS LANTPAAFQPFQNLESKLSLIHSLKGGQEQIVSLFSAHPPL SAGRCQSSQHV Y RWLCQIELTCARQ **PQSPH*YHT* KCQMLRK QRDTSC +HHLDTALQICDLWRACT S*EHPLHVY+AQRR*L*SCSH M HKVENDLTASIRFHTEATRYLQTSNSPHILG*** ASHDA*C+IRLSFRSLHKHYH*AASKRFGLTKMDLQEIHFQRKN+CLLSKQAHLYSTRNPLNAKNSYHHQVQGIC*SH+CHNQQRLRFDN  ALPW QK+STPSCELSTCQKISQEPCKISRIW+HLQ S*C*SPL*T +KIPKPLVHNWCRSQARLQELLLIASYS*AHLAT I
Subject   2966  PR*CQ*CSPSPSCG*SAIGPSTTYGHQCGMSHVKSKPHHV*SLTLLIRQKLV*VASCQSKTAQSSSPQSLKPKSHLRRS*TEPEGSHACCGRLHNQQMLQSWSPS*NDMAVWTQTLDSQTSDSQCCTCRTYPQVISIYHSAQLPVLRDPFGSHMCFDRDHQQEK*KHHFVWLTDKGQYSLEGTVEPHQK*RNGLPSGLQFS*ETLQRSQRPNLLFLICQPLPLCNYHPFPSLF*LNLLEPFWVKQRLRICLQTSS*SSCTESFYQLQRCQARLSTLEI*YQKLIFLRAMAWNR*TSHHLSHQLSPLANTPAAFQPFQNLESKLSLIHSLKGGQEQIVSLFSAHPPLCSAGRCQSSQHV*YARWLCQIELTCARQG**PQSPH*YHT*RKCQMLRKLQRDTSCSNHHLDTALQICDLWRACTGS*EHPLHVYRAQRR*L*SCSHLMGHKVENDLTASIRFHTEATRYLQTSNSPHILG***SASHDA*CKIRLSFRSLHKHYH*AASKRFGLTKMDLQEIHFQRKNVCLLSKQAHLYSTRNPLNAKNSYHHQVQGIC*SHRCHNQQRLRFDNLVALPWTQKRSTPSCELSTCQKISQEPCKISRIWSHLQFS*C*SPL*TTQKIPKPLVHNWCRSQARLQELLLIASYS*AHLATWI  4933

Range 4: 2963 to 4885 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1287.3 bits(2803) 0.0 607/641(95%) 0/641(0%) Minus/Plus
Query       51  LYQSC*MCLGVRSNQ**FLKARLRSTPVMDQRFWDLSRCSKGTLTLRRLKMVPYS*YXXXXXXXXLAS*EFTRRSALFLDPRKCCSVVKSKPLLIMTLMTLTNSLYLVMVTVFGIQWVSC*VQMGLL*KQA*VLSLKVNLL*IHLCQPKPF*GSSVIMLMQRTK**PYSALGIM*G*SLSPQNMR*VGSLEIASGLCVESYACSQIIFNLVLH*MAA*SQLSPLRLVDVKWMFLTICAGPPQITYLKSCVKVVA*T*CISLRLSKHLTFVLSVISMGRLRSSILAGACQLYLT*PTNI*DMXXXXXXXXXXXRWMS*EE*NDLLLTSFQ*MDQR*LTFQVLKGLKSCRGVC*EA*LV**VMRSLTIPSHGSQEYQLLISNLES*QSCLAPLELVKAFCTRAL*RGLKANS*PLFHPEGL*PIQLKETWKWMIVAKWQRLVNQKKKVGTL*PLKCFLGKLQT*RQAIASFLMRFNCSLQAILTFVC*PYEVMLSFHLLVIPVKAHMTPKRIAQYWGLSRVIY*DYLRVSPTGTTLRVGGL*IQCLSPDCHVISRRAP*LQHSLIMPSSTTCMTSFWLGLRPP*MRFWFQALRRRRLCSLTLA*SNSH*LLANQQG*TSNMVEF*FHMTHSTLMTVDG*RPYR  1973
                +Y SC*MCLGVRSNQ**FLKARLRSTPVMDQRFWDL  CSKGTLTLR+LKM PYS*YLTRLL*DLLAS*EFTRRSA FL PRKC  VVKSKPLLIMT MTLTNSLYLVMVTVFGIQWVSC*VQMGLL*KQA VLSLKVNLL*IHLCQPKPF*GSSVIMLMQRTK**PY ALGIM*G*SL PQNMR*VGSLEIASGLCVESYACSQIIFNLV H*MAA*SQLSPLR VDVKWMFLT CAGPPQITYLKSCVKVV *T*CISL+LSKHLTF LSVISMGRLRSS LAGACQLYLT*PT+I DMLRRLATARR *RWMS*E+*NDLLLTSFQ*MDQR*LTFQVLKGLKSCRGVC* A*LV**VMRSLTIPSHGSQEYQLLISNLES*QSCLAPLELVKAFCTRAL*RGLKANS*PLFHPEGL* IQLKETWKWMIVAKWQRL NQKKKVGTL*PLKCFLGKLQT*RQAIASFLMRFNCSLQAILTFVC*PYEVMLSF LLVIPVKAHMTPKRIAQYW LSRVIY*DYLRVSPTGTTLRVGGL*IQCLSPDCHVISRRAP*LQH LIM SSTTCMTSFWLGLRPP*MRFWFQALRRRRLCSLTLA*SNSH*LLANQQG*TSNMV F*FHMTHSTLMTV G*RPYR
Subject   2963  VYPSC*MCLGVRSNQ**FLKARLRSTPVMDQRFWDLLSCSKGTLTLRKLKMAPYS*YLTRLL*DLLAS*EFTRRSAPFLGPRKCY*VVKSKPLLIMTSMTLTNSLYLVMVTVFGIQWVSC*VQMGLL*KQAYVLSLKVNLL*IHLCQPKPF*GSSVIMLMQRTK**PYFALGIM*G*SLLPQNMR*VGSLEIASGLCVESYACSQIIFNLVPH*MAA*SQLSPLRSVDVKWMFLTTCAGPPQITYLKSCVKVVV*T*CISLKLSKHLTFALSVISMGRLRSSTLAGACQLYLT*PTSILDMLRRLATARRA*RWMS*EK*NDLLLTSFQ*MDQR*LTFQVLKGLKSCRGVC*GA*LV**VMRSLTIPSHGSQEYQLLISNLES*QSCLAPLELVKAFCTRAL*RGLKANS*PLFHPEGL*QIQLKETWKWMIVAKWQRLANQKKKVGTL*PLKCFLGKLQT*RQAIASFLMRFNCSLQAILTFVC*PYEVMLSFLLLVIPVKAHMTPKRIAQYWELSRVIY*DYLRVSPTGTTLRVGGL*IQCLSPDCHVISRRAP*LQHLLIMQSSTTCMTSFWLGLRPP*MRFWFQALRRRRLCSLTLA*SNSH*LLANQQG*TSNMVGF*FHMTHSTLMTVGG*RPYR  4885

Range 5: 2967 to 4562 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1154.8 bits(2514) 0.0 502/532(94%) 0/532(0%) Minus/Plus
Query      374  IKVARCA*E*EAINNSS*RRACDRHQLWTKGFGIFRGVQRGL*H*ED*RWFHIRDILQGSCEIFWQVESSQDGVLFFWIQGSAARLSNRSLC*L*H**L*QIPCTW*W*LFLAFSGFLVEYRWACFESRHKFFR*K*ISCRSIFVSPNRFEAAQ**CLCRERNDSLILH*ASCEANHYHPRI*GELEVWR*RVASVWNLMLAVKSFSTLCSIEWLHDHSYRLCAW*T*SGCS*LSVQALHKSHI*RAVSRWWLKHDVSR*GFRSI*HLC*V*YQWGD*GHQSWRAHVSSI*HNQRTYKTC*EDWQRPAEYKGG*AEKSETICS*PPFNEWIKDNLLSKF*KG*KAAGVFARRLNWCDK**EV*RFQAMALRNINF*YQISRVDSRAWHLWSW*KLSVQELYEEV*RQIRNLCFTQKGSSQFN*KRLGNG**LQSGKGW*IKKRRLGRCDL*SVS*ENCKPEGRPLRHF**GSTVPSRLY*PLSVDHTK*CFHFTCW*SLSKHI*LPKGSRNTGG*AE*YIEIT*G*VLQVQH  1969
                I+VARCA*E*EAINNSS*RRACDRHQLWTKGFGIF  VQRGL*H*E+*RW HIRDILQGSCEIFWQVESSQDGVL FW+QGSA RLSNRSLC*L*H *L*QIPCTW*W*LFLAFSGFLVEYRWACFESRH FFR*K*ISCRSIFVSPNRFEAAQ**CLCRERNDSLILH*ASCEA+HY+PRI*GELEVWR*RVASVWNLMLAVKSFSTLC I+WLHDHSYRLCA *T*SGCS*L VQALHKSHI*RAVSRWW +HDVSR* FRSI*HL *V*YQWGD*GHQ WRAHVSSI*HNQR Y TC*EDWQRPAE+KGG*AEKSETICS*PPFNEWIKDNLLSKF*KG*KAAGVFAR LNWCDK**EV*RFQAMALRNINF*YQISRVDSRAWHLWSW*KLSVQELYEEV*RQIRNLCFTQKGSS+FN*KRLGNG**LQSGKGW IKKRRLGRCDL*SVS*ENCKPEGRPLRHF**GSTVPSRLY*PLSV+HTK*CFHF+CW*SLSKHI*LPKGSRNTG *AE*YIEIT*G*VLQVQH
Subject   2967  IQVARCA*E*EAINNSS*RRACDRHQLWTKGFGIF*VVQRGL*H*EN*RWLHIRDILQGSCEIFWQVESSQDGVLLFWVQGSATRLSNRSLC*L*HR*L*QIPCTW*W*LFLAFSGFLVEYRWACFESRHTFFR*K*ISCRSIFVSPNRFEAAQ**CLCRERNDSLILH*ASCEADHYYPRI*GELEVWR*RVASVWNLMLAVKSFSTLCPIKWLHDHSYRLCAR*T*SGCS*LPVQALHKSHI*RAVSRWWFEHDVSR*SFRSI*HLR*V*YQWGD*GHQPWRAHVSSI*HNQRAY*TC*EDWQRPAEHKGG*AEKSETICS*PPFNEWIKDNLLSKF*KG*KAAGVFARGLNWCDK**EV*RFQAMALRNINF*YQISRVDSRAWHLWSW*KLSVQELYEEV*RQIRNLCFTQKGSSKFN*KRLGNG**LQSGKGWQIKKRRLGRCDL*SVS*ENCKPEGRPLRHF**GSTVPSRLY*PLSVNHTK*CFHFSCW*SLSKHI*LPKGSRNTGS*AE*YIEIT*G*VLQVQH  4562

Range 6: 3462 to 4934 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1078.3 bits(2347) 0.0 483/491(98%) 0/491(0%) Plus/Minus
Query        2  STLMPVMFTKSKLWLKRDRAVIHLRSSVWNESCEIKTPPYLKFNPVDSPKVSVSCFMPK*DCTIFFSSKLETKIASKEVLDRAKRKSCMLWKMA*SANAAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVL*QGSPASEMKASLRMVNRQRSI*PGGNS*TSSKMTQWPAFRFAIFLRNTSKVTTSQPSFFDLPAFATXXXXXXXXXXXXXXARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLISEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTLLSSSTFILCGPLPIFSTCLICSLVMSNRADMRPPGLMTSISPLISHLAQMSNASKASARYIMFKPPP*HSSSNM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHRGHSLSPNFQLTSYSGVIMISLT*CLMQNK  1474
                STLMPVMFTKSKLWLKRDRAV HLRSSVWNESCEIKTPP LKFNPVDSPKVSVSCFMPK*DCTIFFSSKLETKIASKEVLDRA+RKSCMLWK+A*SANAAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVL*QGSPA EMKASLRMVNRQRSI*PGGNS*TSSKMTQWPAFRFAIFLRNTSKVTTSQPSFFDLPAFATLQLSSISKSLLIE ARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLISEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFT LSSSTF+LCGPLPIFSTCLICSLVMSNRADMRPPGLMTSISPLISHLAQMSNASKASARYIMFKPPP*HSSSNM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHRGHSLSPNFQLTSYSGVIMISLT*CLMQNK
Subject   3462  STLMPVMFTKSKLWLKRDRAVNHLRSSVWNESCEIKTPPCLKFNPVDSPKVSVSCFMPK*DCTIFFSSKLETKIASKEVLDRARRKSCMLWKIA*SANAAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVL*QGSPAREMKASLRMVNRQRSI*PGGNS*TSSKMTQWPAFRFAIFLRNTSKVTTSQPSFFDLPAFATLQLSSISKSLLIEFARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLISEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTFLSSSTFMLCGPLPIFSTCLICSLVMSNRADMRPPGLMTSISPLISHLAQMSNASKASARYIMFKPPP*HSSSNM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHRGHSLSPNFQLTSYSGVIMISLT*CLMQNK  4934

Range 7: 2967 to 3422 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
315.4 bits(682) 0.0 149/152(98%) 0/152(0%) Plus/Minus
Query     1514  CLKTVWADKDGSTRDSLSTKELMPAFKASPSVLNKKPTECQKQLPSPGTGNLLKXXXXXXXXXXI*QPSSTSLDPEKEHSVL*TLNLPEDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKTFGP*LVSIASAPSRTIIDCFLLLGTSSNFD  1969
                CLKTVWADKDGSTRDSLSTKE MPAFKASPSVLNKKPTECQKQLPSPGTGNLLKSSMS*SAEASI*QPSSTSLDPEKEHSVL*TLNLPEDLTGAL*DITNMEPSSIFLMLKSPLN SKDPKTFGP*LVSIASAPSRTIIDCFLLLGTSSN D
Subject   2967  CLKTVWADKDGSTRDSLSTKERMPAFKASPSVLNKKPTECQKQLPSPGTGNLLKSSMS*SAEASI*QPSSTSLDPEKEHSVL*TLNLPEDLTGAL*DITNMEPSSIFLMLKSPLNNSKDPKTFGP*LVSIASAPSRTIIDCFLLLGTSSNLD  3422

Range 8: 4599 to 4934 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
253.5 bits(547) 0.0 103/112(92%) 0/112(0%) Minus/Plus
Query        2  QTAMSFQEGLHDCSIR*LCHLPQHA*LPFGSV*DLLRCDFGFKL*GEEDCAVLLWHEATHTNFWRINRVKLQIWWSFNFT*LIPH**P*MDDGPIAL*PQLGLGKHYWHQRG  337
                QTAMSFQEGLHDCSI *LC+LPQHA*LP GSV*DLLRCDFGFKL*GEEDCAVLLWHEATHTNFWRINRVKLQ WW F+FT*LIPH**P*+ DGPIAL*PQLGLG+HYWHQRG
Subject   4599  QTAMSFQEGLHDCSIC*LCNLPQHA*LPSGSV*DLLRCDFGFKL*GEEDCAVLLWHEATHTNFWRINRVKLQTWWGFDFT*LIPH**P*VVDGPIAL*PQLGLGEHYWHQRG  4934

Grapevine rupestris stem pitting associated virus isolate VF1, partial genome

Sequence ID: KT948710.1 Length: 8716 Number of Matches: 9

Range 1: 2966 to 4936 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1521.0 bits(3313) 0.0 631/657(96%) 0/657(0%) Minus/Plus
Query        1  VSKLLDVPRSKKQSIIVLEGALAIDTSYGPKVLGSFEVFKGDFNIKKIEDGSIFVISYKAPVRSSGKLRVHKTECSFSGSKEVLLGCQIEASADYDIDDFNKFPVPGDGNCFWHSVGFLLSTDGLALKAGISSFVESESLVDPSLSAQTVLRQLSDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPGGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRRVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSDIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKIANLKAGHCVIFDEVQLFPPGYIDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKYGGVLISHDSFHTDDRRWMTALSRFSHNLDLVNITGISVE  1971
                +SKLLDVPRSKKQSI+VLEGALA+DT YGPKVLGSFEVFKGDFNIKKIEDGSIFVISY+APVRS GKLRVH+TECSFSGSKEVLLGCQIEASADYDIDDFNKF VPGDGNCFWHSVGFLLSTDGLALKAGI SFVESESL DP+LS QTVL+QL DNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINP GRMSALFDITNEHIRHVEKIGNGPQSIKVDELR+VKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTS+IKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDD CKVAKAGKSK+EGWDVVTFEVFLRKI NLKAGHCVIFDEVQLFPPGY+DLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLD ILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFK+GG+LISHDSFHTDDRRW+TALSRFSHNLDLVNITG+SVE
Subject   2966  LSKLLDVPRSKKQSILVLEGALAMDTGYGPKVLGSFEVFKGDFNIKKIEDGSIFVISYRAPVRSLGKLRVHRTECSFSGSKEVLLGCQIEASADYDIDDFNKFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESLADPALSTQTVLQQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDVILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGVSVE  4936

Range 2: 2972 to 4933 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1131.0 bits(2462) 0.0 492/654(75%) 0/654(0%) Plus/Minus
Query        4  HADASNVYQVQVVAKAR*GRHPSTVISVE*VM*N*NSTIFEV*PC*FAKS*CELLHAKVRLHNLLLLKA*NQNRI*GGLRPSQKEVMHVVEDGIISECCSHGALLEMTWQSGLKHWIHKPPTLNVVPVGLTLK*SQYITLLSPQYCAILLGVICALTGITSK*NESITSYGQQTKVNIAWREQLNLIKNDAMACLQVCNFPKKHFKGHNVPTFFF*FTSLCHFATIIHFQVSFN*IG*SPSG*NKGYEFAFRPLHKALVQKAFTSSKGAKHDCQLSRFDIRS*YS*EPWLGIVKLLITYHTS*AS*QTPLQLFSPFKTWKVSYL*SIH*KEVKSRSFHSSQLIHLYTLRAVANLLNMSYMFVGYVK*S*HAPARIDDLNLPIDITLSTNVKCFESLSEIHHV*ATTLTQLFKYVICGGPAQIVKNIHFTSTKRRGDSCDHAAIQWSTRLKMI*LQA*DSTQRPLAISKLPTHLIFWGDND*PHMMPNAE*GYHFVLCISIITELPQNGLG*QRWIYKRFTFNERTYACFQSKPICTQQETH*MPKTVTITRYREFVKVINVIISRGFDLTTEQHFLGSRKRALRLVNSQLARRSHRSLVRYHEYGTIFNLLNVKVPFEHLERSQNLWSITGVDRKRAFKNYY*LLLTPRHI*QL  1965
                HA AS++YQVQVVAKA *GR P T+IS+E*VM*N NST+FEV P *F+K * +LLH KVRLHN LLLKA*N N +*G LRP QKE+MH+V++GIISE CSHGALLEMTWQSGLKHWIHKPP LNVVPVGL LK*SQYITLL P YCA+LLGVICAL G+TS+*NES+TSYG QTKVNIAWR+QLNLIK+  MACL + N  +KHFKGH+VPT   *   LCHFA IIHFQ+SFN*I *SP G*NKGYEF FRPLHKAL+QK   SSK  KHDCQ  RFDI S*Y *+PWLGI+K  +TYH S*AS*QT LQLF PFK WKVSYL SIH +EVKSRS H SQ IHLY LRAV NLLNM YMF+ YVK S*HA ARID+LNLPI++TLSTNV+ FESLSEIHHV A TL Q FK VIC G AQIVKNI+FTSTKR G+SCDHAAIQW T LK+I*LQA +ST RPLAISKLPTH IFW DND PHMMPNAE*GYH VLCISI+T+L QN LG*Q WI K FTFN+RTYA FQSKPIC QQETH*+PK VTI RYREFVKVINVIISRG +LTT++HFL  RK   R V+SQ A+R HRS VRY++YG IFN LNV+VPFEHL+RSQNLW I  +  +  FK+ Y*LLLTPRHI*QL
Subject   2972  HAHASDIYQVQVVAKA**GR*PPTIISME*VM*NQNSTMFEVQPR*FSKC*RKLLHTKVRLHNFLLLKA*N*NDV*GSLRPGQKEIMHIVKNGIISESCSHGALLEMTWQSGLKHWIHKPPALNVVPVGLALK*SQYITLLGP*YCAVLLGVICALAGVTSE*NESVTSYG*QTKVNIAWRKQLNLIKDHTMACL*ILNLSEKHFKGHDVPTLSL*LACLCHFAAIIHFQISFN*IS*SPPG*NKGYEFTFRPLHKALIQKTLASSKSPKHDCQFPRFDI*S*YP*KPWLGIIKFFVTYHAS*AS*QTSLQLFCPFKAWKVSYLRSIHREEVKSRSLHFSQFIHLYALRAVTNLLNMPYMFISYVKQS*HASARIDNLNLPINVTLSTNVERFESLSEIHHVQAATLAQFFKNVICRGSAQIVKNIYFTSTKR*GNSCDHAAIQWGTWLKVI*LQAQNST*RPLAISKLPTHFIFWSDNDQPHMMPNAE*GYHLVLCISIVTKLLQNSLG*QSWICKGFTFNKRTYAGFQSKPICAQQETH*VPKAVTIARYREFVKVINVIISRGLNLTTKKHFLRPRKGTFRPVDSQFAKRPHRSPVRYYKYGAIFNFLNVEVPFEHLKRSQNLWPIASIHCECTFKD*Y*LLLTPRHI*QL  4933

Range 3: 3463 to 4935 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1018.8 bits(2217) 0.0 456/491(93%) 0/491(0%) Plus/Minus
Query        2  STLMPVMFTKSKLWLKRDRAVIHLRSSVWNESCEIKTPPYLKFNPVDSPKVSVSCFMPK*DCTIFFSSKLETKIASKEVLDRAKRKSCMLWKMA*SANAAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVL*QGSPASEMKASLRMVNRQRSI*PGGNS*TSSKMTQWPAFRFAIFLRNTSKVTTSQPSFFDLPAFATXXXXXXXXXXXXXXARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLISEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTLLSSSTFILCGPLPIFSTCLICSLVMSNRADMRPPGLMTSISPLISHLAQMSNASKASARYIMFKPPP*HSSSNM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHRGHSLSPNFQLTSYSGVIMISLT*CLMQNK  1474
                STL PV+FTKSKLWLKRDRAV HLRSSVWNESCEIK PP LKF+PVDSP VSVSCF+PK*DCTIFFSSKLET++ SKEVLDRA+RKSC+L KMA*SA AAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVL QGSPASEMKASLRMVNRQRS *PGGNS*TSSK+TQWPAFRF+IFLRNTSKVTTSQPS FDLPAFATLQ SSIS+SLLIELARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLI EVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFT LSSSTF+LCGPLPIFSTCLICSLVMSNRADMRP GL+TSISPL+SHLAQMSNASKASARYIMF+PPP H+SS M*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGA G*K*FDCKHKIPH+GHSLSPNFQLTSYSGVIMI+LT*CLMQNK
Subject   3463  STLTPVIFTKSKLWLKRDRAVNHLRSSVWNESCEIKIPPCLKFSPVDSPNVSVSCFIPK*DCTIFFSSKLETRMTSKEVLDRARRKSCIL*KMA*SAKAAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVLWQGSPASEMKASLRMVNRQRST*PGGNS*TSSKITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRSLLIELARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTFLSSSTFMLCGPLPIFSTCLICSLVMSNRADMRPLGLITSISPLMSHLAQMSNASKASARYIMFRPPPWHNSSKM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAHG*K*FDCKHKIPHKGHSLSPNFQLTSYSGVIMINLT*CLMQNK  4935

Range 4: 2968 to 3423 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
287.4 bits(621) 0.0 138/152(91%) 0/152(0%) Plus/Minus
Query     1514  CLKTVWADKDGSTRDSLSTKELMPAFKASPSVLNKKPTECQKQLPSPGTGNLLKXXXXXXXXXXI*QPSSTSLDPEKEHSVL*TLNLPEDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKTFGP*LVSIASAPSRTIIDCFLLLGTSSNFD  1969
                C KTVW D+ GS RDSLST E MPAFKASPSVLNKKPTECQKQLPSPGT NLLKSSMS*SAEASI*QP STSLDPEKEHSVL TLNLP DLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKTFGP* VSIASAPSRT IDCFLLLGTSSN D
Subject   2968  CCKTVWVDRAGSARDSLSTNERMPAFKASPSVLNKKPTECQKQLPSPGTENLLKSSMS*SAEASI*QPRSTSLDPEKEHSVLWTLNLPRDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKTFGP*PVSIASAPSRTSIDCFLLLGTSSNLD  3423

Range 5: 2967 to 4706 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
960.1 bits(2089) 0.0 432/580(74%) 0/580(0%) Plus/Minus
Query      231  RRS*TEPKGSHACCGRWHNQRMLQSWSPS*NDMAVWTQTLDSQTSDSQCCTCRTYPQVISIYHSAQPPVLRDPFGSHMCFDRDHQQVK*KHHFVWSTDKGQYSLEGTVEPHQK*RNGLPSGLQFS*ETLQRSQRPNLLFLIYQPLPLCNYHPFPSLF*LNWLEPFWVKQRLRICLQTSS*SSCTESFYQLQRCQARLSTLEI*YQKLIFLRAMAWNR*TXXXXXXXXXXXANTPAAFQPFQNLESKLSLIHSLKGGQEQIVSLFSAHPPLYSAGRCQSSQHVLYVRWLCQIELTCARQD**PQSPH*YHT*HKCQMLRKPQRDTSCLSHHLDTALQICDLWRACTDS*EHPLHVYQAQRR*L*SCSHSMEHKVENDLTASIRFHTEATRYLQTSNSPHILG***LASHDA*CRIRLSFRSLHKHYH*AASKRFGLTKMDLQEIHFQRKNLCLLSKQAHLYSTRNPLNAKNSYHHQVQGIC*SHQCHNQQRLRFDNRAALPWIQKKSTPSCELSTCQKISQEPCKISRIWNHLQSS*C*SPL*TPRKIPKPLVHNWCRSQARLQELLLIASYS*AHLATLI  1970
                R+S*T P+G+HA C +WHNQR LQSWSPS*NDMAVWTQTLDSQTS SQCCTCRT PQVISIYH A+P VLR PFGSHMCF R HQ+VK*K HFVW TDKGQ+SLE T EPHQ+  NGLP   Q  *ETLQRS+RPN L L   PLPLC++HPFP LF*LN LEP WVKQRLRI LQTSS*SS TE+  QLQ+ QARLS  EI*Y KLI L+AMAWN *   HLS QLSLLAN PAAF PFQ+LESKLS IHS +GGQEQI SLFS HPPL SAGR QSSQH LYV  LCQ ELTC R D**PQSPH* HT*HKC+ LRKPQRDTSC   HL T LQ CDL R CTDS*EH LHVYQA R+*L*SCSHSM H VE+DL AS +FH +ATRYLQTSNS HIL ***  SHDA*CRIRLS RSLHKH H  A+K+FGLT++DLQ IHFQ+ N+C LSKQAHL STRNPL+AK+SYH QVQ IC*SHQCHNQQR +FDN+ ALP  QK++ PSC LS CQ+ SQEPCKI +IW+HLQ S*C*SPL*TP+KIPKPL H+    +  LQ L+LIASYS*AHLAT I
Subject   2967  RKS*TGPEGNHAYCEKWHNQRKLQSWSPS*NDMAVWTQTLDSQTSGSQCCTCRTCPQVISIYHFARPLVLRGPFGSHMCFGRGHQRVK*KRHFVWLTDKGQHSLEETAEPHQRSHNGLPLDSQSF*ETLQRSRRPNPLSLTCLPLPLCSHHPFPDLF*LN*LEPSWVKQRLRIYLQTSS*SSYTENSCQLQKSQARLSIPEI*YLKLISLKAMAWNH*IFRHLSRQLSLLANIPAAFLPFQSLESKLSSIHSSRGGQEQIASLFSVHPPLCSAGRYQSSQHALYVH*LCQTELTCVR*D**PQSPH*CHT*HKCRTLRKPQRDTSCSGRHLGTILQKCDL*RVCTDS*EHLLHVYQALRQ*L*SCSHSMGHMVESDLIASTKFHIKATRYLQTSNSLHILE***STSHDA*CRIRLSSRSLHKHCHQVAAKQFGLTELDLQGIHFQQTNVCRLSKQAHLCSTRNPLSAKSSYHRQVQRIC*SHQCHNQQRPQFDNQEALP*TQKRNIPSCGLSICQETSQEPCKILQIWSHLQFS*C*SPL*TPQKIPKPLAHSQYPLRVHLQGLVLIASYS*AHLATWI  4706

Range 6: 4749 to 4934 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
89.5 bits(189) 0.0 43/62(69%) 0/62(0%) Plus/Minus
Query        3  PR*CQ*CLPSPSCG*SAIGPSSIYGHQCGMSHVKLKLHHI*SLTLLIRQKLV*VASCQSKTA  188
                PR  Q* LPSPSCG*S IGP + Y HQ GMSHVK K HH+*S   LI Q L *VAS QSKTA
Subject   4749  PRSRQ*YLPSPSCG*SVIGPLTTYDHQYGMSHVKSKFHHV*SSAPLILQMLA*VASYQSKTA  4934

Range 7: 2968 to 4563 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
846.9 bits(1842) 0.0 390/532(73%) 0/532(0%) Minus/Plus
Query      374  IKVARCA*E*EAINNSS*RRACDRHQLWTKGFGIFRGVQRGL*H*ED*RWFHIRDILQGSCEIFWQVESSQDGVLFFWIQGSAARLSNRSLC*L*H**L*QIPCTW*W*LFLAFSGFLVEYRWACFESRHKFFR*K*ISCRSIFVSPNRFEAAQ**CLCRERNDSLILH*ASCEANHYHPRI*GELEVWR*RVASVWNLMLAVKSFSTLCSIEWLHDHSYRLCAW*T*SGCS*LSVQALHKSHI*RAVSRWWLKHDVSR*GFRSI*HLC*V*YQWGD*GHQSWRAHVSSI*HNQRTYKTC*EDWQRPAEYKGG*AEKSETICS*PPFNEWIKDNLLSKF*KG*KAAGVFARRLNWCDK**EV*RFQAMALRNINF*YQISRVDSRAWHLWSW*KLSVQELYEEV*RQIRNLCFTQKGSSQFN*KRLGNG**LQSGKGW*IKKRRLGRCDL*SVS*ENCKPEGRPLRHF**GSTVPSRLY*PLSVDHTK*CFHFTCW*SLSKHI*LPKGSRNTGG*AE*YIEIT*G*VLQVQH  1969
                I+VARCA*E*EAIN S *R   + + LW KGFGIF GVQRGL H*E+*RW HI +ILQGSCE+ WQ+ES QDG+  FW+ GSA+ LSN  LC*L*H**L*QI CTW W*L LA SGFLVE+RWACFESRH F  *K*I CRS  V+PN F A  * CLCRER+DSLILH*ASCE +HYH RI* ELEVWR*RVA +WN +LA+KS ST+C IEWLHDHSY L AW*T*S CS*LSVQ L+KSH *R V RW  +HDVSR*GFRS+ HLC*V*+ WGD*G+QS R HVSS+*HN  TYK C*EDW RPAE+KGG* EKSE ICS*PP +EWI+DNLLSK *KG KAAG+FARRLNW DK* ++* FQAMA R+INF YQIS +DSRAW  WSW + SV ELYEEV*R IRNLCFTQ+GSS FN*KR GNG* LQSGKG  +K+R LGR DL*SVS ++ + +GRPL   **GS V SRL *PLSV+HTK* FHFT W* L KHI*LPKG RNT G A+*YIEIT*G VLQVQH
Subject   2968  IQVARCA*E*EAINTSP*RCTRNGYWLWAKGFGIF*GVQRGLQH*EN*RWLHICNILQGSCEVSWQIESPQDGMFLFWV*GSASWLSN*GLC*L*H**L*QILCTWRW*LLLALSGFLVEHRWACFESRHTFVC*K*IPCRSSSVNPNCFAATW*QCLCRERDDSLILH*ASCEVDHYHSRI*SELEVWR*RVAFMWNFVLAIKSLSTMCPIEWLHDHSYCLSAW*T*SRCS*LSVQTLYKSHF*RIVPRWRPEHDVSR*GFRSVRHLC*V*H*WGD*GYQS*RTHVSSV*HN**TYKAC*EDW*RPAEHKGG*TEKSEAICS*PPLDEWIEDNLLSKL*KGRKAAGMFARRLNWRDK*RKI**FQAMAFRDINFKYQISGIDSRAWDFWSWQEFSV*ELYEEV*R*IRNLCFTQEGSS*FN*KRSGNG*WLQSGKGRQVKERGLGRRDL*SVSQKD*ESKGRPLCDL**GSAVSSRLC*PLSVNHTK*RFHFTRW*PLPKHI*LPKGPRNTRGRAK*YIEIT*GQVLQVQH  4563

Range 8: 4600 to 4935 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
191.2 bits(411) 0.0 79/112(71%) 0/112(0%) Minus/Plus
Query        2  QTAMSFQEGLHDCSIR*LCHLPQHA*LPFGSV*DLLRCDFGFKL*GEEDCAVLLWHEATHTNFWRINRVKLQIWWSFNFT*LIPH**P*MDDGPIAL*PQLGLGKHYWHQRG  337
                QTAMSFQEGLHDCS R*LCH  Q+A* P G V*D LR    FKL*GEE+CAVLLW+EAT+ N WRIN  +LQ WW+F+FT*LIP+** *+ +GPI L*PQLGLGK++W +RG
Subject   4600  QTAMSFQEGLHDCSFR*LCHFSQYA*FPSGPV*DFLRRHSSFKL*GEENCAVLLWYEATYANIWRINGAELQTWWNFDFT*LIPY**S*VVNGPITL*PQLGLGKYHWRERG  4935

Range 9: 2967 to 4883 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
958.3 bits(2085) 0.0 481/639(75%) 0/639(0%) Minus/Plus
Query       54  YQSC*MCLGVRSNQ**FLKARLRSTPVMDQRFWDLSRCSKGTLTLRRLKMVPYS*YXXXXXXXXLAS*EFTRRSALFLDPRKCCSVVKSKPLLIMTLMTLTNSLYLVMVTVFGIQWVSC*VQMGLL*KQA*VLSLKVNLL*IHLCQPKPF*GSSVIMLMQRTK**PYSALGIM*G*SLSPQNMR*VGSLEIASGLCVESYACSQIIFNLVLH*MAA*SQLSPLRLVDVKWMFLTICAGPPQITYLKSCVKVVA*T*CISLRLSKHLTFVLSVISMGRLRSSILAGACQLYLT*PTNI*DMXXXXXXXXXXXRWMS*EE*NDLLLTSFQ*MDQR*LTFQVLKGLKSCRGVC*EA*LV**VMRSLTIPSHGSQEYQLLISNLES*QSCLAPLELVKAFCTRAL*RGLKANS*PLFHPEGL*PIQLKETWKWMIVAKWQRLVNQKKKVGTL*PLKCFLGKLQT*RQAIASFLMRFNCSLQAILTFVC*PYEVMLSFHLLVIPVKAHMTPKRIAQYWGLSRVIY*DYLRVSPTGTTLRVGGL*IQCLSPDCHVISRRAP*LQHSLIMPSSTTCMTSFWLGLRPP*MRFWFQALRRRRLCSLTLA*SNSH*LLANQQG*TSNMVEF*FHMTHSTLMTVDG*RPY  1970
                Y SC*MCLGVRSNQ * LK   +    M QRFWDL RCSKGT TLR+LKM PY *YLT LL* LLA+*E T R+  FL  RKC  VVK +PLLIMTLMTLTNSLYL MVT FG QWVSC* QMGLL*K A V  LKVN L I LCQPK F  + V MLMQRT+**PYSALGIM*G*SLS QNM+*VGSLEIASGL VE  AC+QI FN V H*MAA*SQL P RLVDVK MFLTICA P QIT+LK+C KV A*T*CISLRLSK  TFVLSV  MGRLR SILA ACQL LT*  NI* MLRRL TARR *RWM+*E+*+DLLLTS +*MD+R*LTFQ LKG KSCR VC*EA*L **V ++L IPSHG Q YQL ISNL +*QSCL  LEL + FC RAL*RGLK NS*PLFHP GL* IQLKE WKWM+ AKWQR  +Q+++VGT *PLKCF  +L+ *RQAI   LMRF+C LQA+LTFVC*PYEV LSFH LV P KAHMTPKR AQY G S+VIY*DYLR SPTGTTLR GGL*IQCLSPDCHVISRRAP*LQ SLIMP  T CM SFW GLR P*  F FQALRRR+LCSLTL *SN  * L NQ+G*TSNMVEF*FHMTHS LM V G*RPY
Subject   2967  YPSC*MCLGVRSNQY*SLKVHSQWILAMGQRFWDLLRCSKGTSTLRKLKMAPYL*YLTGLL*GLLAN*ESTGRNVPFLGLRKCFLVVKLRPLLIMTLMTLTNSLYLAMVTAFGTQWVSC*AQMGLL*KPAYVRLLKVNPLQIQLCQPKLFCSNLVTMLMQRTR**PYSALGIM*G*SLSLQNMK*VGSLEIASGLYVEFCACNQITFNHVPH*MAA*SQLLPQRLVDVK*MFLTICADPLQITFLKNCAKVAA*T*CISLRLSKRSTFVLSVTLMGRLRLSILADACQLCLT*LMNI*GMLRRLVTARRA*RWMN*EK*SDLLLTSSR*MDRR*LTFQALKGQKSCRDVC*EA*LA**VTKNLMIPSHGFQGYQLQISNLGN*QSCLGLLELARVFCIRAL*RGLKVNS*PLFHPGGL*LIQLKEIWKWMMAAKWQRQASQRERVGTS*PLKCFSERLRI*RQAIV*SLMRFSCFLQAMLTFVC*PYEVTLSFHSLVTPAKAHMTPKRTAQY*GPSKVIY*DYLRASPTGTTLRAGGL*IQCLSPDCHVISRRAP*LQLSLIMPFFTICMISFWPGLRLP*TSF*FQALRRRKLCSLTLV*SNLR*HLENQRG*TSNMVEF*FHMTHSILMIVGG*RPY  4883

Grapevine rupestris stem pitting associated virus isolate CS BR, complete genome

Sequence ID: KX958435.1 Length: 8743 Number of Matches: 9

Range 1: 2966 to 4936 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1517.7 bits(3306) 0.0 630/657(96%) 0/657(0%) Minus/Plus
Query        1  VSKLLDVPRSKKQSIIVLEGALAIDTSYGPKVLGSFEVFKGDFNIKKIEDGSIFVISYKAPVRSSGKLRVHKTECSFSGSKEVLLGCQIEASADYDIDDFNKFPVPGDGNCFWHSVGFLLSTDGLALKAGISSFVESESLVDPSLSAQTVLRQLSDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPGGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRRVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSDIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKIANLKAGHCVIFDEVQLFPPGYIDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKYGGVLISHDSFHTDDRRWMTALSRFSHNLDLVNITGISVE  1971
                +SKLLDVPRSKKQSI+VLEGALA+DT YGPKVLGSFEVFKGDFNIKKIEDGSIFVISY+APVRS GKLRVH+TECSFSGSKEVLLGCQIEASADYDIDDFNKF VPGDGNCFWHSVGFLLSTDGLALKAGI SFVESESL DP+LS QTVL+QL DNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINP GRM ALFDITNEHIRHVEKIGNGPQSIKVDELR+VKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTS+IKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDD CKVAKAGKSK+EGWDVVTFEVFLRKI NLKAGHCVIFDEVQLFPPGY+DLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKT LD ILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFK+GG+LISHDSFHTDDRRW+TALSRFSHNLDLVNITGISVE
Subject   2966  LSKLLDVPRSKKQSILVLEGALAMDTGYGPKVLGSFEVFKGDFNIKKIEDGSIFVISYRAPVRSPGKLRVHRTECSFSGSKEVLLGCQIEASADYDIDDFNKFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESLADPALSTQTVLKQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMPALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTPLDVILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGISVE  4936

Range 2: 2978 to 4933 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1130.5 bits(2461) 0.0 494/652(76%) 0/652(0%) Plus/Minus
Query        4  HADASNVYQVQVVAKAR*GRHPSTVISVE*VM*N*NSTIFEV*PC*FAKS*CELLHAKVRLHNLLLLKA*NQNRI*GGLRPSQKEVMHVVEDGIISECCSHGALLEMTWQSGLKHWIHKPPTLNVVPVGLTLK*SQYITLLSPQYCAILLGVICALTGITSK*NESITSYGQQTKVNIAWREQLNLIKNDAMACLQVCNFPKKHFKGHNVPTFFF*FTSLCHFATIIHFQVSFN*IG*SPSG*NKGYEFAFRPLHKALVQKAFTSSKGAKHDCQLSRFDIRS*YS*EPWLGIVKLLITYHTS*AS*QTPLQLFSPFKTWKVSYL*SIH*KEVKSRSFHSSQLIHLYTLRAVANLLNMSYMFVGYVK*S*HAPARIDDLNLPIDITLSTNVKCFESLSEIHHV*ATTLTQLFKYVICGGPAQIVKNIHFTSTKRRGDSCDHAAIQWSTRLKMI*LQA*DSTQRPLAISKLPTHLIFWGDND*PHMMPNAE*GYHFVLCISIITELPQNGLG*QRWIYKRFTFNERTYACFQSKPICTQQETH*MPKTVTITRYREFVKVINVIISRGFDLTTEQHFLGSRKRALRLVNSQLARRSHRSLVRYHEYGTIFNLLNVKVPFEHLERSQNLWSITGVDRKRAFKNYY*LLLTPRHI*  1959
                HA ASN+YQVQVVA+A *GR P  VIS+E*VM*N*NST+FEV P *F+K *C+LLH KVRLHN LLLKA*N N I*G LRPSQKEVMH+V++GI+SE CSHGALLEMTW S LKHWIHK PTLNVVPVGL LK  QYITLL P YCA+LLGVICALTG+TS+*NES+TSYG QT+VNIAWR+QLNLI++  MACL + N  +KHFKGHNVPT   *F  LCHFATIIHFQVSFN*IG*SP G*NKGYEF FR LH+ALVQKAF SSK +KH+C   RFDI S*YS*+PWLGI+K LITYHTS*AS* T LQLF PFK WKVSY  SIH*+EVKSRSFH SQ IHLY LRAV NLL+MSYMF+GYVK S HA ARID+ NLPI+ITLSTNV+CFESLSEIHHV +TTL Q FK VICGG  QIVKNIHFTS +R G+SCDHA+IQW T LKMI*LQA +ST RPLA+SKLPTH IFWG+N  PHMMPNAE*GYH +LCISI+T+L QN LG*Q WI K FTF++RTY  FQSKPIC QQE H*+PK V ITR R+FVKVIN+IISRG +LTTE HFL SRK   R V+SQ ARR HRS VRYH+YG IFN LNVKVPFE+L+RSQNLW I G+  K  FK+ Y*LLLTPRHI*
Subject   2978  HAYASNIYQVQVVAEA**GR*PPAVISME*VM*N*NSTMFEVQPR*FSKC*CKLLHTKVRLHNFLLLKA*N*NDI*GSLRPSQKEVMHIVKNGIVSESCSHGALLEMTW*SRLKHWIHKSPTLNVVPVGLALKQPQYITLLGP*YCAVLLGVICALTGVTSE*NESVTSYG*QTQVNIAWRKQLNLIEDHTMACL*IFNLSEKHFKGHNVPTLSL*FACLCHFATIIHFQVSFN*IG*SPPG*NKGYEFTFRSLHEALVQKAFASSKSSKHNC*FPRFDI*S*YS*KPWLGIIKFLITYHTS*AS**TSLQLFCPFKAWKVSYFRSIH*EEVKSRSFHFSQFIHLYALRAVTNLLDMSYMFIGYVKQSWHASARIDNFNLPINITLSTNVECFESLSEIHHVQSTTLAQFFKNVICGGSTQIVKNIHFTSAERGGNSCDHASIQWGTGLKMI*LQAQNST*RPLAVSKLPTHFIFWGNNYQPHMMPNAE*GYHLILCISIVTKLLQNSLG*QSWICKGFTFDKRTYTSFQSKPICAQQEAH*VPKAVAITRNRKFVKVINIIISRGLNLTTE*HFLRSRKGTFRPVDSQFARRPHRSPVRYHKYGAIFNFLNVKVPFEYLKRSQNLWPIAGIHCKCTFKD*Y*LLLTPRHI*  4933

Range 3: 3463 to 4935 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1004.1 bits(2185) 0.0 450/491(92%) 0/491(0%) Plus/Minus
Query        2  STLMPVMFTKSKLWLKRDRAVIHLRSSVWNESCEIKTPPYLKFNPVDSPKVSVSCFMPK*DCTIFFSSKLETKIASKEVLDRAKRKSCMLWKMA*SANAAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVL*QGSPASEMKASLRMVNRQRSI*PGGNS*TSSKMTQWPAFRFAIFLRNTSKVTTSQPSFFDLPAFATXXXXXXXXXXXXXXARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLISEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTLLSSSTFILCGPLPIFSTCLICSLVMSNRADMRPPGLMTSISPLISHLAQMSNASKASARYIMFKPPP*HSSSNM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHRGHSLSPNFQLTSYSGVIMISLT*CLMQNK  1474
                STLMPV+FTKSKLWLKRDRAV HLRSSVWNESCEIK PP LKF+PVDSP VSVSCF+PK*DCTIFFSSKLET++ S+ VLD A+RKSC+L KMA*SA AAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVL*QGSPASEMKASLRMV+R RS *PGGNS*TSSK+TQWPAFRF+IFLRNTSKVTTSQPS FDLPAFATLQ SSIS+SLLIELARALLGETKVTNLPSDLF+KLLY+KLLPAPKVPSTTVNSRDLI EVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFT LSSSTF+LCGPLPIFSTCLICSLVMSNRA MRP GL+TSISPLISHLAQMSNASKASARYIMF PPP H+SS M*FVEGLHR*LRTSTSRLPSAEAIAVIM PFNGAQG*K*FDCKHKIPH+GHSLSPNFQLTSYSGVI+I+LT*CLMQNK
Subject   3463  STLMPVIFTKSKLWLKRDRAVNHLRSSVWNESCEIKIPPCLKFSPVDSPNVSVSCFIPK*DCTIFFSSKLETRMTSRGVLDLARRKSCIL*KMA*SAKAAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVL*QGSPASEMKASLRMVSRHRST*PGGNS*TSSKITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRSLLIELARALLGETKVTNLPSDLFMKLLYKKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTFLSSSTFMLCGPLPIFSTCLICSLVMSNRAGMRPLGLITSISPLISHLAQMSNASKASARYIMFSPPPWHNSSKM*FVEGLHR*LRTSTSRLPSAEAIAVIMHPFNGAQG*K*FDCKHKIPHKGHSLSPNFQLTSYSGVIIINLT*CLMQNK  4935

Range 4: 2968 to 3423 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
285.2 bits(616) 0.0 136/152(89%) 0/152(0%) Plus/Minus
Query     1514  CLKTVWADKDGSTRDSLSTKELMPAFKASPSVLNKKPTECQKQLPSPGTGNLLKXXXXXXXXXXI*QPSSTSLDPEKEHSVL*TLNLPEDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKTFGP*LVSIASAPSRTIIDCFLLLGTSSNFD  1969
                C KTVW D+ GS RDSLST E +PAFKASPSVLNKKPTECQKQLPSPGT NLLKSS+S*SAEASI*QPSSTSLDPEKEHSVL TLNLP DLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKTFGP* VSIASAPSRT IDCFLLLGTSS+ D
Subject   2968  CFKTVWVDRAGSARDSLSTNERIPAFKASPSVLNKKPTECQKQLPSPGTENLLKSSIS*SAEASI*QPSSTSLDPEKEHSVLWTLNLPGDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKTFGP*PVSIASAPSRTSIDCFLLLGTSSSLD  3423

Range 5: 2968 to 4563 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
850.1 bits(1849) 0.0 386/532(73%) 0/532(0%) Minus/Plus
Query      374  IKVARCA*E*EAINNSS*RRACDRHQLWTKGFGIFRGVQRGL*H*ED*RWFHIRDILQGSCEIFWQVESSQDGVLFFWIQGSAARLSNRSLC*L*H**L*QIPCTW*W*LFLAFSGFLVEYRWACFESRHKFFR*K*ISCRSIFVSPNRFEAAQ**CLCRERNDSLILH*ASCEANHYHPRI*GELEVWR*RVASVWNLMLAVKSFSTLCSIEWLHDHSYRLCAW*T*SGCS*LSVQALHKSHI*RAVSRWWLKHDVSR*GFRSI*HLC*V*YQWGD*GHQSWRAHVSSI*HNQRTYKTC*EDWQRPAEYKGG*AEKSETICS*PPFNEWIKDNLLSKF*KG*KAAGVFARRLNWCDK**EV*RFQAMALRNINF*YQISRVDSRAWHLWSW*KLSVQELYEEV*RQIRNLCFTQKGSSQFN*KRLGNG**LQSGKGW*IKKRRLGRCDL*SVS*ENCKPEGRPLRHF**GSTVPSRLY*PLSVDHTK*CFHFTCW*SLSKHI*LPKGSRNTGG*AE*YIEIT*G*VLQVQH  1969
                ++  RCA*E*EAIN S *R  C+ ++LW KGFGIF G+QRGL*H*E+*RW HI DILQGSCE+ WQ+ES QDG+  FWI GSA RLSN  LC*L*+**L*QI C+W*W L LA SG LVE+RWACFES + F   K*I CRS  V+PN FEA  * CLCRE +DSLILH*ASCE ++Y+PRI* ELEVWR RVA +WN +LAVKSFSTLC IEW+HDHSY L A  T*SGCS*LSV  LHKSH *R V RWW +HDVSR*GFRSI HLC*V*Y WGD* +QS R H SS+*HNQ TYKTC EDW RPA++KGG* EKSETICS*PP NEWI++NLLSK *KG KAA +F RRLNWCDK**E+* FQAMA RNINF YQIS ++S AW+ WSW KL VQEL+EE+*R IRNLCFTQ+GSSQFN*KR GNG* LQSGKG  IK+R LGRCDL*SVS ++ K +GRPL    *GS V SRL *P+S +HTK* FHFT W* LSKHI*LPKG RNT G A+*YIE+ *G VLQVQH
Subject   2968  VQATRCA*E*EAINTSP*RCTCNGYRLWAKGFGIF*GIQRGL*H*EN*RWLHICDILQGSCEVSWQIESPQDGMFLFWI*GSATRLSN*GLC*L*Y**L*QIFCSW*WQLLLALSGLLVEHRWACFESWYTFVCRK*IPCRSSSVNPNCFEATW*QCLCRE*DDSLILH*ASCEVDNYYPRI*SELEVWRQRVAFMWNFVLAVKSFSTLCPIEWMHDHSYCLRARQT*SGCS*LSV*TLHKSHF*RIVPRWWTEHDVSR*GFRSIRHLC*V*Y*WGD*SYQS*RTHASSV*HNQ*TYKTCREDW*RPAKHKGG*TEKSETICS*PPLNEWIENNLLSKL*KGRKAARMFTRRLNWCDK**EI**FQAMAFRNINFKYQISGINSCAWNFWSWQKLFVQELHEEI*R*IRNLCFTQEGSSQFN*KRPGNG*WLQSGKGRQIKERGLGRCDL*SVSQKD*KSKGRPLCDLR*GSAVSSRLC*PVSANHTK*RFHFTRW*PLSKHI*LPKGPRNTRGRAK*YIEVA*GQVLQVQH  4563

Range 6: 4603 to 4935 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
198.1 bits(426) 0.0 81/111(73%) 0/111(0%) Minus/Plus
Query        2  TAMSFQEGLHDCSIR*LCHLPQHA*LPFGSV*DLLRCDFGFKL*GEEDCAVLLWHEATHTNFWRINRVKLQIWWSFNFT*LIPH**P*MDDGPIAL*PQLGLGKHYWHQRG  334
                T MSFQEGLHDCS R*LCH  Q+A*LP G V*D  RC   FKL*GEE+CAVLLW+EAT+TN WRIN  +LQ WW+FNFT*LIP+**P + +GPI L PQLGLGK+YWH+RG
Subject   4603  TTMSFQEGLHDCSFR*LCHFSQYA*LPSG*V*DSPRCHSSFKL*GEENCAVLLWYEATYTNIWRINGAELQTWWNFNFT*LIPY**PQVVNGPITLQPQLGLGKYYWHKRG  4935

Range 7: 2979 to 4700 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
945.0 bits(2056) 0.0 426/574(74%) 0/574(0%) Plus/Minus
Query      237  S*TEPKGSHACCGRWHNQRMLQSWSPS*NDMAVWTQTLDSQTSDSQCCTCRTYPQVISIYHSAQPPVLRDPFGSHMCFDRDHQQVK*KHHFVWSTDKGQYSLEGTVEPHQK*RNGLPSGLQFS*ETLQRSQRPNLLFLIYQPLPLCNYHPFPSLF*LNWLEPFWVKQRLRICLQTSS*SSCTESFYQLQRCQARLSTLEI*YQKLIFLRAMAWNR*TXXXXXXXXXXXANTPAAFQPFQNLESKLSLIHSLKGGQEQIVSLFSAHPPLYSAGRCQSSQHVLYVRWLCQIELTCARQD**PQSPH*YHT*HKCQMLRKPQRDTSCLSHHLDTALQICDLWRACTDS*EHPLHVYQAQRR*L*SCSHSMEHKVENDLTASIRFHTEATRYLQTSNSPHILG***LASHDA*CRIRLSFRSLHKHYH*AASKRFGLTKMDLQEIHFQRKNLCLLSKQAHLYSTRNPLNAKNSYHHQVQGIC*SHQCHNQQRLRFDNRAALPWIQKKSTPSCELSTCQKISQEPCKISRIWNHLQSS*C*SPL*TPRKIPKPLVHNWCRSQARLQELLLIASYS*AHL  1958
                S*T P+GSHA C +WH+QR LQSWSPS*NDM V TQTLDSQ SDSQCCTCRT PQ  SIYH A+P VLR PFGSHMCFDR HQ+VK*K HFVW  D GQ+SLE T EPH++  NGLP   Q  *ETLQRSQRPN L LI  PLPLCN+HPFP LF*LNWLEP WVKQRLRI LQ SS*SSCT+SF QLQ+ QA+L   EI*Y KLIFL+AMAWN * SHHLSHQLSLL N  AAF PFQ+LESKL  IHSL+GGQEQIVSLFS HPPL  AGR QSS+HVLYV WLCQ EL C R D** QSPH*YHT*HKC+MLRKPQRDTSC  HHL T LQ CDLWR  TDS*EHPLHV +A+R+*L*SC HSM H+VENDLTAS +FH +ATR LQTSNS HILG**   SHDA*CRIRLS  SLHKH H  ASK+FGLT++DLQ IHF++ N+  LSKQAHL STR+PL+AK+S HHQ Q IC*SHQ HNQQR +FDNR ALP IQK++ PSC LS CQ+ SQEPCKIS+IW+HLQ S*C*SPL* P+KIPKPL H+    Q  LQ L+LIASYS*AHL
Subject   2979  S*T*PEGSHAYCEKWHSQRKLQSWSPS*NDMVV*TQTLDSQISDSQCCTCRTCPQATSIYHFARPLVLRGPFGSHMCFDRGHQRVK*KRHFVWLADTGQHSLEETAEPHRRSHNGLPLDFQSF*ETLQRSQRPNPLSLICLPLPLCNHHPFPGLF*LNWLEPSWVKQRLRIYLQISS*SSCTKSFCQLQKFQAQLLIPEI*YLKLIFLKAMAWNH*ISHHLSHQLSLLVNILAAFLPFQSLESKLFSIHSLRGGQEQIVSLFSVHPPLCFAGRYQSSRHVLYVHWLCQTELACVR*D**LQSPH*YHT*HKCRMLRKPQRDTSCSVHHLGTILQKCDLWRVYTDS*EHPLHVCRARRQ*L*SCIHSMGHRVENDLTASTKFHIKATRCLQTSNSLHILG**LSTSHDA*CRIRLSSHSLHKHCHQVASKQFGLTELDLQGIHFRQTNVYQLSKQAHLCSTRSPLSAKSSCHHQEQKIC*SHQYHNQQRPQFDNRVALP*IQKRNIPSCGLSICQETSQEPCKISQIWSHLQFS*C*SPL*IPQKIPKPLAHSRYPLQVHLQGLVLIASYS*AHL  4700

Range 8: 4749 to 4934 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.7 bits(209) 0.0 46/62(74%) 0/62(0%) Plus/Minus
Query        3  PR*CQ*CLPSPSCG*SAIGPSSIYGHQCGMSHVKLKLHHI*SLTLLIRQKLV*VASCQSKTA  188
                PR CQ* LPSPSCG*S IGP +  GHQ GMSHVKLK HH+*S   LI Q LV*VAS QSKTA
Subject   4749  PRLCQ*YLPSPSCG*SVIGPLTTCGHQYGMSHVKLKFHHV*SSAPLILQMLV*VASYQSKTA  4934

Range 9: 2973 to 4883 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
964.2 bits(2098) 0.0 482/637(76%) 0/637(0%) Minus/Plus
Query       54  SC*MCLGVRSNQ**FLKARLRSTPVMDQRFWDLSRCSKGTLTLRRLKMVPYS*YXXXXXXXXLAS*EFTRRSALFLDPRKCCSVVKSKPLLIMTLMTLTNSLYLVMVTVFGIQWVSC*VQMGLL*KQA*VLSLKVNLL*IHLCQPKPF*GSSVIMLMQRTK**PYSALGIM*G*SLSPQNMR*VGSLEIASGLCVESYACSQIIFNLVLH*MAA*SQLSPLRLVDVKWMFLTICAGPPQITYLKSCVKVVA*T*CISLRLSKHLTFVLSVISMGRLRSSILAGACQLYLT*PTNI*DMXXXXXXXXXXXRWMS*EE*NDLLLTSFQ*MDQR*LTFQVLKGLKSCRGVC*EA*LV**VMRSLTIPSHGSQEYQLLISNLES*QSCLAPLELVKAFCTRAL*RGLKANS*PLFHPEGL*PIQLKETWKWMIVAKWQRLVNQKKKVGTL*PLKCFLGKLQT*RQAIASFLMRFNCSLQAILTFVC*PYEVMLSFHLLVIPVKAHMTPKRIAQYWGLSRVIY*DYLRVSPTGTTLRVGGL*IQCLSPDCHVISRRAP*LQHSLIMPSSTTCMTSFWLGLRPP*MRFWFQALRRRRLCSLTLA*SNSH*LLANQQG*TSNMVEF*FHMTHSTLMTVDG*RPY  1964
                S *MCLGVRSNQ * LK  L+  P M QRFWDL R SKGTLTLR+LKM PY *YLT LL* LLA+*E T R+  FLD RKC SVVK +PLLIM LMTLTN L+LVM T FG QW SC* QMGLL*K   V   KVN L I LCQPK F* + V MLMQR +**PYSALGIM*G* L PQNM+*VGSLE ASGL VE  ACSQIIFN V H*M A*SQL P R  DVKWMFLTIC  PPQIT+LK+C KVV *T*CISLRLSKH TFVLSVI MGRL+ SILA ACQL LT*P NI*DM RRL TAR+ *RWM+*E+*NDLLLTS Q*MD++*LTFQ LKG KSC+ V *EA*LV**VMR+L IPSHG QEYQL ISNL +*Q CL  LEL KAFCTRA *R LK NS*PLFHP GL*PIQLKETWKWM+VAKWQR  NQ+++VGTL*PLKCF  +L+ *RQAI    MRF+C LQA+LT VC*PYEV LSFH LV PVKAHMTPKR AQY G S+VIY*  LR SPTGTTLRVG L*IQCLS D HVISRRAP*LQ SL MP  T CMTSFWLGLR P*M F FQALRRR+LCSLTL *SN H* L NQ+G*TSNMVEF*FHMTHS LMT  G*RPY
Subject   2973  SY*MCLGVRSNQY*SLKVHLQWIPAMGQRFWDLLRYSKGTLTLRKLKMAPYL*YLTGLL*GLLAN*ESTGRNVPFLDLRKCYSVVKLRPLLIMILMTLTNFLFLVMATAFGTQWASC*AQMGLL*KLVYVRLSKVNPLQIQLCQPKLF*SNLVTMLMQRMR**PYSALGIM*G**LLPQNMK*VGSLETASGLYVEFCACSQIIFNPVPH*MDA*SQLLPPRSADVKWMFLTICVDPPQITFLKNCAKVVD*T*CISLRLSKHSTFVLSVILMGRLKLSILADACQLCLT*PMNI*DMSRRLVTARKA*RWMN*EK*NDLLLTSSQ*MDRK*LTFQALKGQKSCKDVY*EA*LV**VMRNLMIPSHGFQEYQLQISNLGN*QLCLELLELAKAFCTRAS*RDLKVNS*PLFHPGGL*PIQLKETWKWMMVAKWQRQANQRERVGTL*PLKCFSERLKI*RQAIV*SSMRFSCFLQAMLTCVC*PYEVTLSFHSLVTPVKAHMTPKRTAQY*GPSKVIY*GCLRASPTGTTLRVGDL*IQCLSLDYHVISRRAP*LQLSLTMPFFTICMTSFWLGLRLP*MSF*FQALRRRKLCSLTLV*SNLH*HLENQRG*TSNMVEF*FHMTHSILMTAGG*RPY  4883

Grapevine rupestris stem pitting associated virus isolate SK704 A, complete genome

Sequence ID: KX274274.1 Length: 8725 Number of Matches: 9

Range 1: 2965 to 4935 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1517.7 bits(3306) 0.0 627/657(95%) 0/657(0%) Minus/Plus
Query        1  VSKLLDVPRSKKQSIIVLEGALAIDTSYGPKVLGSFEVFKGDFNIKKIEDGSIFVISYKAPVRSSGKLRVHKTECSFSGSKEVLLGCQIEASADYDIDDFNKFPVPGDGNCFWHSVGFLLSTDGLALKAGISSFVESESLVDPSLSAQTVLRQLSDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPGGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRRVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSDIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKIANLKAGHCVIFDEVQLFPPGYIDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKYGGVLISHDSFHTDDRRWMTALSRFSHNLDLVNITGISVE  1971
                +SKLLDVPRSKKQSI+VLEGALA+DT YGPK+LGSFEVFKGDFNIKKIEDGSIFVISY+APVRS GKLRVH+TECSFSGS+EVLLGCQIEASADYDIDDFNKF VPGDGNCFWHSVGFLLSTDGLALKAGI SFVESES+ DP+LS QTVL+QL DNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINP GRMSALFDITNEHIRHVEKIGNGPQSIKVDELR+VKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTS+IKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK+DLEMDD CKVAKAGKSK+EGWDVVTFEVFLRKI NLKAGHCVIFDEVQLFPPGY+DLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAF DYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFK+GG+LISHDSFHTDDRRW+TALSRFSHNLDLVNITG+SVE
Subject   2965  LSKLLDVPRSKKQSILVLEGALAMDTGYGPKILGSFEVFKGDFNIKKIEDGSIFVISYRAPVRSPGKLRVHRTECSFSGSREVLLGCQIEASADYDIDDFNKFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESIADPALSTQTVLKQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFTDYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGVSVE  4935

Range 2: 2971 to 4932 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1105.8 bits(2407) 0.0 488/654(75%) 0/654(0%) Plus/Minus
Query        4  HADASNVYQVQVVAKAR*GRHPSTVISVE*VM*N*NSTIFEV*PC*FAKS*CELLHAKVRLHNLLLLKA*NQNRI*GGLRPSQKEVMHVVEDGIISECCSHGALLEMTWQSGLKHWIHKPPTLNVVPVGLTLK*SQYITLLSPQYCAILLGVICALTGITSK*NESITSYGQQTKVNIAWREQLNLIKNDAMACLQVCNFPKKHFKGHNVPTFFF*FTSLCHFATIIHFQVSFN*IG*SPSG*NKGYEFAFRPLHKALVQKAFTSSKGAKHDCQLSRFDIRS*YS*EPWLGIVKLLITYHTS*AS*QTPLQLFSPFKTWKVSYL*SIH*KEVKSRSFHSSQLIHLYTLRAVANLLNMSYMFVGYVK*S*HAPARIDDLNLPIDITLSTNVKCFESLSEIHHV*ATTLTQLFKYVICGGPAQIVKNIHFTSTKRRGDSCDHAAIQWSTRLKMI*LQA*DSTQRPLAISKLPTHLIFWGDND*PHMMPNAE*GYHFVLCISIITELPQNGLG*QRWIYKRFTFNERTYACFQSKPICTQQETH*MPKTVTITRYREFVKVINVIISRGFDLTTEQHFLGSRKRALRLVNSQLARRSHRSLVRYHEYGTIFNLLNVKVPFEHLERSQNLWSITGVDRKRAFKNYY*LLLTPRHI*QL  1965
                HA  SNVYQVQ+V KA *GR P T+IS+E*VM*N*NST+FEV P *F K *C+LLH KVRLHN L LKA NQN I*GGLRPSQKEVMH+V++GI+SE CSHGALL+MTWQSGLKHWIHKPP LN+VPVGL LK*SQY+TLLSP Y A+LLGVICALTG+TSK*NES+TSYG  TKVN+A R++L+LIKN  MACL + N  +K+FKGHNVPTF  *F  LCHFATIIHFQV FN*I *SP G*NKGYE  FRPLHKA VQKAF  SK +KHDCQ  RFDI S*Y *EPWLGI+K LITY+TS*AS*QT LQLFSP K WKVSYL SIH*KEVKSRSFH SQ IHLY LRA+ANLLN+SYMF+GYVK*S*HA ARI++LN  I+ITL TNV+CFE LSE+HHV ATTL Q FK +ICG  AQIVK+IH TS +RRG+S  HAAIQW T LKMI*LQA +ST RPL ISK PTHLI WGDND PHMMPNAE*GYH VLCISI+ +L QN LG*Q WI   FTFN+ TYA FQSKP+C QQETH*+PK VTITR+R+FVKVINVIISRG +LTTE +F    K   R V+SQ ARRSHRS VRY++YG IFN LNV+VPFE+L+RSQNL SI G+  K  FK+ Y*LLL PRHI*QL
Subject   2971  HAYTSNVYQVQIVTKA**GR*PPTIISME*VM*N*NSTMFEVQPR*FTKC*CKLLHTKVRLHNFLFLKARNQNGI*GGLRPSQKEVMHIVKNGIVSERCSHGALLKMTWQSGLKHWIHKPPALNIVPVGLALK*SQYVTLLSP*YRAVLLGVICALTGVTSK*NESVTSYG**TKVNVARRKKLDLIKNHTMACL*IFNLSEKYFKGHNVPTFSL*FACLCHFATIIHFQVLFN*IS*SPPG*NKGYELTFRPLHKAFVQKAFACSKSSKHDCQFPRFDI*S*YP*EPWLGIIKFLITYNTS*AS*QTSLQLFSPLKAWKVSYLRSIH*KEVKSRSFHFSQFIHLYALRAIANLLNVSYMFIGYVK*S*HASARINNLNFSINITLGTNVECFEGLSEVHHVQATTLAQFFKDMICGRSAQIVKDIHLTSAERRGNSGYHAAIQWGTGLKMI*LQAQNST*RPLTISKFPTHLILWGDNDQPHMMPNAE*GYHLVLCISIVAKLLQNCLG*QSWICNGFTFNK*TYASFQSKPVCAQQETH*VPKAVTITRHRKFVKVINVIISRGLNLTTE*YFSRP*KGTFRPVDSQFARRSHRSPVRYYKYGAIFNFLNVEVPFEYLKRSQNLRSIAGIHCKCTFKD*Y*LLLAPRHI*QL  4932

Range 3: 3462 to 4934 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1012.3 bits(2203) 0.0 454/491(92%) 0/491(0%) Plus/Minus
Query        2  STLMPVMFTKSKLWLKRDRAVIHLRSSVWNESCEIKTPPYLKFNPVDSPKVSVSCFMPK*DCTIFFSSKLETKIASKEVLDRAKRKSCMLWKMA*SANAAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVL*QGSPASEMKASLRMVNRQRSI*PGGNS*TSSKMTQWPAFRFAIFLRNTSKVTTSQPSFFDLPAFATXXXXXXXXXXXXXXARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLISEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTLLSSSTFILCGPLPIFSTCLICSLVMSNRADMRPPGLMTSISPLISHLAQMSNASKASARYIMFKPPP*HSSSNM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHRGHSLSPNFQLTSYSGVIMISLT*CLMQNK  1474
                STL PVMFTKSKL LKRDRAV HLRSSVWNESCEIK PP LKF+PVDSP VSVSCF+PK*DCTIFFSSKLET++ASKEVLDRA+RKSC+L KMA*S NAAVMEPFLK*HGSLDSNIGFTNLRLS+LYL*DLPSSNLN+SLCSAPSIARSFWESYVL*QGSPASEMKASLRMVNRQRS *PGG S TSSK+TQWPAFRF+IFLRNTSKVTTSQPS FDLPAFATLQ SSIS+S LIELARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLI EVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFT LSSSTF+LCGPLPIFSTCLICSLVMSN+ADMRP GL+TSISPLISHLAQMSNASKASARYIMF+PPP H+SS +*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPH+GHSLSPNFQLTSYSGVIMISLT*CLMQNK
Subject   3462  STLTPVMFTKSKL*LKRDRAVNHLRSSVWNESCEIKIPPCLKFSPVDSPNVSVSCFIPK*DCTIFFSSKLETRMASKEVLDRARRKSCIL*KMA*SVNAAVMEPFLK*HGSLDSNIGFTNLRLSILYL*DLPSSNLNMSLCSAPSIARSFWESYVL*QGSPASEMKASLRMVNRQRST*PGGKSWTSSKITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRSFLIELARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTFLSSSTFMLCGPLPIFSTCLICSLVMSNKADMRPLGLITSISPLISHLAQMSNASKASARYIMFRPPPWHNSSKI*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHKGHSLSPNFQLTSYSGVIMISLT*CLMQNK  4934

Range 4: 2967 to 3422 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
283.8 bits(613) 0.0 137/152(90%) 0/152(0%) Plus/Minus
Query     1514  CLKTVWADKDGSTRDSLSTKELMPAFKASPSVLNKKPTECQKQLPSPGTGNLLKXXXXXXXXXXI*QPSSTSLDPEKEHSVL*TLNLPEDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKTFGP*LVSIASAPSRTIIDCFLLLGTSSNFD  1969
                C KTVW D+ GS  DSLST E MPAFKASPSVLNKKPTECQKQLPSPGT NLLKSSMS*SAEASI*QPSSTSLDPEKEHSVL TLNLP DLTGAL*DITNMEPSSIFLMLKSPLNTSKDPK FGP* VSIASAPSRT IDCFLLLGTSSN D
Subject   2967  CFKTVWVDRAGSAMDSLSTNERMPAFKASPSVLNKKPTECQKQLPSPGTENLLKSSMS*SAEASI*QPSSTSLDPEKEHSVLWTLNLPGDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKIFGP*PVSIASAPSRTSIDCFLLLGTSSNLD  3422

Range 5: 2972 to 4933 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1020.1 bits(2220) 0.0 481/654(74%) 0/654(0%) Plus/Minus
Query        3  PR*CQ*CLPSPSCG*SAIGPSSIYGHQCGMSHVKLKLHHI*SLTLLIRQKLV*VASCQSKTAXXXXXXXXXXXXXXRRS*TEPKGSHACCGRWHNQRMLQSWSPS*NDMAVWTQTLDSQTSDSQCCTCRTYPQVISIYHSAQPPVLRDPFGSHMCFDRDHQQVK*KHHFVWSTDKGQYSLEGTVEPHQK*RNGLPSGLQFS*ETLQRSQRPNLLFLIYQPLPLCNYHPFPSLF*LNWLEPFWVKQRLRICLQTSS*SSCTESFYQLQRCQARLSTLEI*YQKLIFLRAMAWNR*TXXXXXXXXXXXANTPAAFQPFQNLESKLSLIHSLKGGQEQIVSLFSAHPPLYSAGRCQSSQHVLYVRWLCQIELTCARQD**PQSPH*YHT*HKCQMLRKPQRDTSCLSHHLDTALQICDLWRACTDS*EHPLHVYQAQRR*L*SCSHSMEHKVENDLTASIRFHTEATRYLQTSNSPHILG***LASHDA*CRIRLSFRSLHKHYH*AASKRFGLTKMDLQEIHFQRKNLCLLSKQAHLYSTRNPLNAKNSYHHQVQGIC*SHQCHNQQRLRFDNRAALPWIQKKSTPSCELSTCQKISQEPCKISRIWNHLQSS*C*SPL*TPRKIPKPLVHNWCRSQARLQELLLIASYS*AHLAT  1964
                PR  Q*CLPSP+C *S IGP + Y HQ GMSHVKLK HH+*S   LI Q LV*VAS QSKTAQ S PQS KP+ HLRRS*TEP+GSHA C +WH+Q  LQSWSPS*NDMAVWTQTLDSQTS SQ CTCRT PQVISI H AQP V R PFGSHMCFDR HQQVK*K HFVW  DKGQ S E    PHQK  NGLP   Q  *E LQRSQRPNLL LI  PLPLCN+HPFP  F*LN LEP WVKQRLR  LQTSS*S CTESF  LQ+ QARLS  EI*Y KLI LRAMAWN * SHHL HQLSLLAN PAAFQP Q+LESKLS IHSLKGGQEQIVSLFS HPPL SAG CQSSQ VLYV WLCQI+LTC R D**PQ  H*YHT HKC+MLR+PQR TSC  HHL T LQ  DLW+ CTDS* HP HV +AQR+*  SCSHSM H+VENDL AS +FH +AT YLQ SNSPH LG*** ASHDA*CRIRLS RSLHKH    ASK FGLT++DLQ IHFQ+ N+C LSKQA L STRNPL+AK+SYHHQ Q IC*SHQCHNQQR +FDNR  L    K++ PSC LS CQ+ISQEPCKI +IW+HLQ S*C*SPL* P+KIPK  VH+    Q  LQ L+LIAS S*AHLAT
Subject   2972  PRLHQ*CLPSPNCD*SVIGPLTTYDHQYGMSHVKLKFHHV*SSAPLIHQMLV*VASYQSKTAQFSFPQSSKPEWHLRRS*TEPEGSHAYCEKWHSQ*TLQSWSPS*NDMAVWTQTLDSQTSGSQYCTCRTCPQVISICHFAQPLVSRGPFGSHMCFDRGHQQVK*KRHFVWLIDKGQRSQEEKAGPHQKSHNGLPLDFQSF*EILQRSQRPNLLSLICLPLPLCNHHPFPGPF*LN*LEPSWVKQRLRTYLQTSS*SFCTESFCLLQKFQARLSIPEI*YLKLISLRAMAWNH*ISHHL*HQLSLLANIPAAFQPSQSLESKLSSIHSLKGGQEQIVSLFSVHPPLCSAGHCQSSQRVLYVHWLCQIKLTCVR*D**PQFLH*YHTWHKCRMLRRPQRGTSCSGHHLGTILQRYDLWKVCTDS*GHPPHVCRAQRQ*RLSCSHSMGHRVENDLIASTKFHIKATHYLQISNSPHTLG***SASHDA*CRIRLSSRSLHKHCRQVASKLFGLTELDLQWIHFQQMNVCQLSKQARLCSTRNPLSAKSSYHHQAQKIC*SHQCHNQQRPQFDNRVVLL*TLKRNIPSCGLSICQEISQEPCKILQIWSHLQFS*C*SPL*IPQKIPKSSVHSRYPLQVHLQGLVLIASCS*AHLAT  4933

Range 6: 2973 to 4562 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
834.5 bits(1815) 0.0 384/530(72%) 0/530(0%) Minus/Plus
Query      374  VARCA*E*EAINNSS*RRACDRHQLWTKGFGIFRGVQRGL*H*ED*RWFHIRDILQGSCEIFWQVESSQDGVLFFWIQGSAARLSNRSLC*L*H**L*QIPCTW*W*LFLAFSGFLVEYRWACFESRHKFFR*K*ISCRSIFVSPNRFEAAQ**CLCRERNDSLILH*ASCEANHYHPRI*GELEVWR*RVASVWNLMLAVKSFSTLCSIEWLHDHSYRLCAW*T*SGCS*LSVQALHKSHI*RAVSRWWLKHDVSR*GFRSI*HLC*V*YQWGD*GHQSWRAHVSSI*HNQRTYKTC*EDWQRPAEYKGG*AEKSETICS*PPFNEWIKDNLLSKF*KG*KAAGVFARRLNWCDK**EV*RFQAMALRNINF*YQISRVDSRAWHLWSW*KLSVQELYEEV*RQIRNLCFTQKGSSQFN*KRLGNG**LQSGKGW*IKKRRLGRCDL*SVS*ENCKPEGRPLRHF**GSTVPSRLY*PLSVDHTK*CFHFTCW*SLSKHI*LPKGSRNTGG*AE*YIEIT*G*VLQVQH  1963
                VARCA*E EAIN S *R  C+ ++LWT+ FGIF G+QRGL H*E+*RW HI +ILQGSCEI WQ+ES QDG+  F +  S  RLSN  LC*L*H**L*QI C W*W*L LA SGFLVE+R ACFES H F  *K*I CRS  V+PN FEA    CLCRER+DSLILH*ASCEA+HYHPR+*GELE+WR* VA +WN +LA+KSFSTLC IEWLHD+ Y LCA  T* GC *LSVQ  HKS++*R V RWW +HDV R*G RSI HLC V*Y W +*G+ S R HVS I*HNQ TYKT *EDWQ PAE+KGG* EKSETICS*PPFNEWI+DNLLSK *+G*KAAG+FARRLNWC K**E+* FQAMALR+INF YQIS +DSRAW+ WS  KLSVQ+LYEEV*R +RNLCFTQ+GSS FN*K  GNG* LQSGKG  IK+RRLGRCDL*S+S ++ K +GRPL  F**G    S L *PLS++HTK* FHFTCW* LSKHI*LPKG R+T G*A+*+IEIT*G VLQVQ+
Subject   2973  VARCA*EQEAINTSP*RCTCNGYRLWTEDFGIF*GIQRGLQH*EN*RWLHICNILQGSCEISWQIESPQDGMFLFRV*RSTTRLSN*GLC*L*H**L*QIFCAW*W*LLLALSGFLVEHRRACFESWHTFIC*K*IHCRSSSVNPNSFEATWRQCLCRERDDSLILH*ASCEADHYHPRV*GELEIWR**VAFMWNFVLAIKSFSTLCPIEWLHDNRYCLCARQT*GGCP*LSVQTFHKSYL*RIVPRWWPEHDVPR*GLRSIRHLCQV*Y*WRN*GY*S*RTHVSFI*HNQ*TYKTR*EDWQWPAEHKGG*TEKSETICS*PPFNEWIEDNLLSKL*EG*KAAGMFARRLNWCYK**EI**FQAMALRDINFKYQISGIDSRAWNFWSRQKLSVQKLYEEV*R*VRNLCFTQEGSS*FN*KGPGNG*WLQSGKGRQIKERRLGRCDL*SISQKD*KSKGRPLCDF**GPAFSSWLR*PLSINHTK*RFHFTCW*PLSKHI*LPKGPRDTRG*AK*HIEIT*GQVLQVQY  4562

Range 7: 4599 to 4934 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.9 bits(419) 0.0 81/112(72%) 0/112(0%) Minus/Plus
Query        2  QTAMSFQEGLHDCSIR*LCHLPQHA*LPFGSV*DLLRCDFGFKL*GEEDCAVLLWHEATHTNFWRINRVKLQIWWSFNFT*LIPH**P*MDDGPIAL*PQLGLGKHYWHQRG  337
                QTAMSF EGLHDCS+ *LCH  Q+A*LP GSV*DLLRC  GF+L*G+E+CAVLLW+EAT+TN W IN  +LQ WW+FNFT*LIP+** *+ +GPI L* Q GLGKHYW +RG
Subject   4599  QTAMSF*EGLHDCSVH*LCHFSQYA*LPSGSV*DLLRCHSGFEL*GKENCAVLLWYEATYTNIW*INGAELQTWWNFNFT*LIPY**S*VVNGPITL*SQFGLGKHYWCKRG  4934

Range 8: 3902 to 4882 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
562.4 bits(1221) 0.0 256/327(78%) 0/327(0%) Minus/Plus
Query       54  WMS*EE*NDLLLTSFQ*MDQR*LTFQVLKGLKSCRGVC*EA*LV**VMRSLTIPSHGSQEYQLLISNLES*QSCLAPLELVKAFCTRAL*RGLKANS*PLFHPEGL*PIQLKETWKWMIVAKWQRLVNQKKKVGTL*PLKCFLGKLQT*RQAIASFLMRFNCSLQAILTFVC*PYEVMLSFHLLVIPVKAHMTPKRIAQYWGLSRVIY*DYLRVSPTGTTLRVGGL*IQCLSPDCHVISRRAP*LQHSLIMPSSTTCMTSFWLGLRPP*MRFWFQALRRRRLCSLTLA*SNSH*LLANQQG*TSNMVEF*FHMTHSTLMTVDG*RPY  1034
                WM+*E+*NDLLLTSFQ*MD+R*LTFQ L+GLKSCR VC*EA*LV *VMR+L IPSHGSQ YQL ISNL +*QSCL  LE  KAFCT+AL*RGLK +S*PLFHP GL* IQLK TWKWM+VAKWQR  NQ++KVGTL*PLK F  +L+ *RQAI  FLMR +  L A LTFV *PYEV LSFHLLV PVKAHMTPKR A+Y GLS+V Y*DYLR SPTGT LR GGL*IQCLSPDCHVI RRAP*LQ SL MP  T CMTSFWLGLRPP*M FWF+ALR+R+LCSLTL *SN H* L NQ+G*TSNMVEF*FHMTHS LM V G*RPY
Subject   3902  WMN*EK*NDLLLTSFQ*MDRR*LTFQALRGLKSCRDVC*EA*LVL*VMRNLMIPSHGSQGYQLQISNLGN*QSCLELLEQAKAFCTKAL*RGLKVSS*PLFHPGGL*LIQLKRTWKWMMVAKWQRQANQREKVGTL*PLKYFSERLKI*RQAIV*FLMRSSFFLLATLTFVY*PYEVTLSFHLLVTPVKAHMTPKRTARY*GLSKVTY*DYLRASPTGTILRAGGL*IQCLSPDCHVILRRAP*LQRSLTMPFFTICMTSFWLGLRPP*MPFWFRALRKRKLCSLTLV*SNLH*HLVNQRG*TSNMVEF*FHMTHSILMIVGG*RPY  4882

Range 9: 2966 to 3862 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
406.6 bits(881) 0.0 214/299(72%) 0/299(0%) Minus/Plus
Query     1074  YQSC*MCLGVRSNQ**FLKARLRSTPVMDQRFWDLSRCSKGTLTLRRLKMVPYS*YXXXXXXXXLAS*EFTRRSALFLDPRKCCSVVKSKPLLIMTLMTLTNSLYLVMVTVFGIQWVSC*VQMGLL*KQA*VLSLKVNLL*IHLCQPKPF*GSSVIMLMQRTK**PYSALGIM*G*SLSPQNMR*VGSLEIASGLCVESYACSQIIFNLVLH*MAA*SQLSPLRLVDVKWMFLTICAGPPQITYLKSCVKVVA*T*CISLRLSKHLTFVLSVISMGRLRSSILAGACQLYLT*PTNI*D  1970
                Y SC*MCLG RSNQ * LK  L+  P MD+RFWDL R SKGT TLR+LKM PY *YLT LL*DLLA+*E T R+  F    K  SVVK +PLLIMTLMTLTN L LVMVT FG QWVSC* Q GLL*K A V  LKVN L I LCQPK F* +   MLMQRT+**PYSALGIM*G*SLSPQ+MR*VG+LEI SGL VE  AC+QIIFN V H*MAA*  L PLR  DV+WM LTICA  PQI  LK+C KVVA*T*C SLR SKH TFV SVI M +LR  ILA ACQLYLT*P NI*D
Subject   2966  YLSC*MCLGARSNQY*SLKVHLQWIPAMDRRFWDLLRYSKGTSTLRKLKMAPYL*YLTGLL*DLLAN*ESTGRNVPFQGLEKYYSVVKLRPLLIMTLMTLTNFLCLVMVTAFGTQWVSC*AQTGLL*KLAYVHLLKVNPLQIQLCQPKQF*SNLATMLMQRTR**PYSALGIM*G*SLSPQSMR*VGNLEIVSGLYVEFCACNQIIFNPVPH*MAA**PLLPLRSADVRWMSLTICADLPQIISLKNCAKVVA*T*CTSLRPSKHSTFVPSVILMEKLRLLILADACQLYLT*PMNI*D  3862

Rupestris stem pitting associated virus isolate RSPaV PN, complete genome

Sequence ID: AY368172.2 Length: 8743 Number of Matches: 8

Range 1: 2965 to 4935 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1472.4 bits(3207) 0.0 610/657(93%) 0/657(0%) Minus/Plus
Query        1  VSKLLDVPRSKKQSIIVLEGALAIDTSYGPKVLGSFEVFKGDFNIKKIEDGSIFVISYKAPVRSSGKLRVHKTECSFSGSKEVLLGCQIEASADYDIDDFNKFPVPGDGNCFWHSVGFLLSTDGLALKAGISSFVESESLVDPSLSAQTVLRQLSDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPGGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRRVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSDIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKIANLKAGHCVIFDEVQLFPPGYIDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKYGGVLISHDSFHTDDRRWMTALSRFSHNLDLVNITGISVE  1971
                +SKLLD+PRSKKQSI+VLEGAL +DTSYGPKVLGSFEVFKGDF++KKIEDGSIFVISY+APVRS GKLRVHKTECSFSGS+EVLLGCQIEASADYDIDDFNKF VP DGNCFWHSVGFLLSTDGLALKAGI SFVESESL D SLS+  VL+QL ++AYAENEMIALFCIRH VRLIIITPEYEVSWKFG+SEWPLCGILCL+SNHFQPCAPLNGCMITAIA+ALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIE+INPGGR+SALFDITNEHI HVEKIG GPQSIKVDELR+VKRSALDLLSMNGS+ITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLS IST DIK RELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKIA+LKAGHCVIFDEVQLFPPGYIDLCLLTIR+DAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEG+SY+YNIESRRFVNPMFE RLPCHFKKGSMTAAFADYAIFHNMHDFLLARSK+ LDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFK GG+LISHDSFH DDRRW+TALSRFSHNLDLVNITG+SVE
Subject   2965  LSKLLDMPRSKKQSILVLEGALEMDTSYGPKVLGSFEVFKGDFSLKKIEDGSIFVISYRAPVRSPGKLRVHKTECSFSGSREVLLGCQIEASADYDIDDFNKFSVPRDGNCFWHSVGFLLSTDGLALKAGIRSFVESESLADSSLSSPAVLKQLGEDAYAENEMIALFCIRHQVRLIIITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIAAALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEIINPGGRISALFDITNEHIMHVEKIGTGPQSIKVDELRKVKRSALDLLSMNGSRITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSSISTVDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKIASLKAGHCVIFDEVQLFPPGYIDLCLLTIRNDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGRSYKYNIESRRFVNPMFECRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKSPLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKNGGILISHDSFHADDRRWLTALSRFSHNLDLVNITGVSVE  4935

Range 2: 3462 to 4934 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
945.0 bits(2056) 0.0 424/491(86%) 0/491(0%) Plus/Minus
Query        2  STLMPVMFTKSKLWLKRDRAVIHLRSSVWNESCEIKTPPYLKFNPVDSPKVSVSCFMPK*DCTIFFSSKLETKIASKEVLDRAKRKSCMLWKMA*SANAAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVL*QGSPASEMKASLRMVNRQRSI*PGGNS*TSSKMTQWPAFRFAIFLRNTSKVTTSQPSFFDLPAFATXXXXXXXXXXXXXXARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLISEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTLLSSSTFILCGPLPIFSTCLICSLVMSNRADMRPPGLMTSISPLISHLAQMSNASKASARYIMFKPPP*HSSSNM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHRGHSLSPNFQLTSYSGVIMISLT*CLMQNK  1474
                STL PV+FTKSKL LKRD+AV HLRSS WNESCEIK PP+LKF PVDSP VSVSCFMPK*DCTIFFSSKLETK+ASK  LDRA+RKSCMLWKMA*SANAAVMEPFLK*HGSL SNIG TNL LSMLYL*DLPSSNLNISLCSAP+IARSFWESYVL QGSPASE+KAS R+V++ RS+*PGGNS*TSSK+TQ PAF+ AIFLR TSKVTTSQPSFFDLPAFATLQLSSISKSLL+ELARALLGETKVTNLPSDLF+KLLY+KLLPAPKVPSTTVNSR LIS VDI ESHG ESLNFSSLITPV+PP+KHPC+FSALSKLGK*VI DPFIERRSRAD FT LSSSTF+LCGP+PIFSTC++CSLVMSN+ADMRPPG M SISPLISHLAQ+SNASKASARYI+ +PPP*HSSS M*FVEGLHR*LRTSTSRLPSA A+AVIMQPFNGAQG K*FD KH++PH+GHSLSPNFQLTSYSGVI+I+LT CL+QNK
Subject   3462  STLTPVIFTKSKL*LKRDKAVNHLRSSAWNESCEIKIPPFLKFKPVDSPNVSVSCFMPK*DCTIFFSSKLETKMASKGDLDRARRKSCMLWKMA*SANAAVMEPFLK*HGSLHSNIGLTNLLLSMLYL*DLPSSNLNISLCSAPNIARSFWESYVLWQGSPASEIKASFRIVSKHRSM*PGGNS*TSSKITQ*PAFKLAIFLRKTSKVTTSQPSFFDLPAFATLQLSSISKSLLMELARALLGETKVTNLPSDLFMKLLYKKLLPAPKVPSTTVNSRGLISTVDILESHGFESLNFSSLITPVRPPNKHPCNFSALSKLGK*VILDPFIERRSRADLFTFLSSSTFMLCGPVPIFSTCIMCSLVMSNKADMRPPGFMISISPLISHLAQISNASKASARYIILRPPP*HSSSKM*FVEGLHR*LRTSTSRLPSAAAMAVIMQPFNGAQGWK*FDFKHRMPHKGHSLSPNFQLTSYSGVIIINLTWCLIQNK  4934

Range 3: 2967 to 3422 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
260.4 bits(562) 0.0 128/152(84%) 0/152(0%) Plus/Minus
Query     1514  CLKTVWADKDGSTRDSLSTKELMPAFKASPSVLNKKPTECQKQLPSPGTGNLLKXXXXXXXXXXI*QPSSTSLDPEKEHSVL*TLNLPEDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKTFGP*LVSIASAPSRTIIDCFLLLGTSSNFD  1969
                C KT   DKD S RDSLSTK+ +PAFKASPSVLN+KPTECQKQLPS GT NLLKSSMS*SAEASI QPSSTSLDPEKEHSVL TLNLP DLTGAL*DITN+EPSSIFL LKSPL TSKDPKTFGP*LVSI+SAPSRT IDCFLLLG S + D
Subject   2967  CFKTAGEDKDESARDSLSTKDRIPAFKASPSVLNRKPTECQKQLPSRGTENLLKSSMS*SAEASIWQPSSTSLDPEKEHSVLWTLNLPGDLTGAL*DITNIEPSSIFLRLKSPLKTSKDPKTFGP*LVSISSAPSRTRIDCFLLLGISRSLD  3422

Range 4: 2980 to 4935 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
923.0 bits(2008) 0.0 404/652(62%) 0/652(0%) Plus/Minus
Query        1  FHADASNVYQVQVVAKAR*GRHPSTVISVE*VM*N*NSTIFEV*PC*FAKS*CELLHAKVRLHNLLLLKA*NQNRI*GGLRPSQKEVMHVVEDGIISECCSHGALLEMTWQSGLKHWIHKPPTLNVVPVGLTLK*SQYITLLSPQYCAILLGVICALTGITSK*NESITSYGQQTKVNIAWREQLNLIKNDAMACLQVCNFPKKHFKGHNVPTFFF*FTSLCHFATIIHFQVSFN*IG*SPSG*NKGYEFAFRPLHKALVQKAFTSSKGAKHDCQLSRFDIRS*YS*EPWLGIVKLLITYHTS*AS*QTPLQLFSPFKTWKVSYL*SIH*KEVKSRSFHSSQLIHLYTLRAVANLLNMSYMFVGYVK*S*HAPARIDDLNLPIDITLSTNVKCFESLSEIHHV*ATTLTQLFKYVICGGPAQIVKNIHFTSTKRRGDSCDHAAIQWSTRLKMI*LQA*DSTQRPLAISKLPTHLIFWGDND*PHMMPNAE*GYHFVLCISIITELPQNGLG*QRWIYKRFTFNERTYACFQSKPICTQQETH*MPKTVTITRYREFVKVINVIISRGFDLTTEQHFLGSRKRALRLVNSQLARRSHRSLVRYHEYGTIFNLLNVKVPFEHLERSQNLWSITGVDRKRAFKNYY*LLLTPRHI  1956
                FH   SN+YQV ++ KA     P  +I VE*VM*N*N  I E+*  * AK  CELLHA+V L++LLL KA*NQN I*G LRPS +EVMHVVE+GII +CCSHGALLEMTWQS  KHWI KPP LNV+ V    K SQYITL SPQYCAILLGV+CAL G+T K*N+ I  Y QQT++N+A RE LNLIKN  M C   CN P++  KG+N+PTF  *  SLCH ATIIHFQVSFN + *S  G NK ++F FR LH+ LVQ+ F   K AKH+C  S  DI S*Y+*EPWL I+K  ITYHTS*A  Q PLQLFSPFKTW+VSY * IH*KEVKS  FH SQL+HLY LR   NL NM Y+F+GYVK* *+A  RI D N PIDIT S N++CFE LS +HH+ AT+LT LF+ VICGGPA +VKNIH TSTKR  + CDHAA+QW TRL+MI* QA ++ QRPLA  KLPT+ IF GDN+ PH++PN + GYH +LCISI T+L  N    QR I K  TFN+R Y  F S+PI   QETH +P+ + +T YR+F++VINVIISR FDL T+QHF GSRKR  R V+SQ  R SHR  +RYH+Y TIFNLL  KV F++L+R Q+LW +T +  K  FK+  *L LT RHI
Subject   2980  FHTYTSNIYQV*IMTKA*QSCQPPAIIGVE*VM*N*NPAILEI*AS*LAKCKCELLHAEVGLYDLLLFKA*NQNGI*GRLRPS*EEVMHVVENGIIGKCCSHGALLEMTWQSAFKHWIDKPPALNVILVRSAFKQSQYITLFSPQYCAILLGVVCALAGVTGK*NKGIIPYCQQTQINVARRE*LNLIKNYTMTCF*ACNLPEEDLKGYNIPTFLL*LASLCHLATIIHFQVSFNGVS*SSPGRNKSHKFTFRSLHETLVQETFACPKSAKHNC*FSGLDIHS*YT*EPWL*IIKFFITYHTS*APQQAPLQLFSPFKTWEVSYP*PIH*KEVKS*PFHFSQLVHLYALRTGTNLFNMHYVFIGYVK*G*YASTRIYDFNFPIDITFSANIECFEGLS*VHHIEATSLT*LFENVICGGPA*VVKNIHLTSTKRGSNGCDHAAVQWGTRLEMI*FQAQNAAQRPLAFPKLPTYFIFRGDNNQPHLVPNTKQGYHLILCISIFTKLL*NCWRGQR*IRKGLTFNKRPYTSF*SEPIRA*QETHRVPEAIAVTGYRKFIEVINVIISRSFDLATKQHFPGSRKRTFRFVDSQFTRGSHRGSIRYHKYRTIFNLLEAKVSFKNLKRPQDLWPVTCIHLKCTFKDEN*LFLTSRHI  4935

Range 5: 2967 to 4562 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
627.4 bits(1363) 0.0 308/532(58%) 0/532(0%) Minus/Plus
Query      374  IKVARCA*E*EAINNSS*RRACDRHQLWTKGFGIFRGVQRGL*H*ED*RWFHIRDILQGSCEIFWQVESSQDGVLFFWIQGSAARLSNRSLC*L*H**L*QIPCTW*W*LFLAFSGFLVEYRWACFESRHKFFR*K*ISCRSIFVSPNRFEAAQ**CLCRERNDSLILH*ASCEANHYHPRI*GELEVWR*RVASVWNLMLAVKSFSTLCSIEWLHDHSYRLCAW*T*SGCS*LSVQALHKSHI*RAVSRWWLKHDVSR*GFRSI*HLC*V*YQWGD*GHQSWRAHVSSI*HNQRTYKTC*EDWQRPAEYKGG*AEKSETICS*PPFNEWIKDNLLSKF*KG*KAAGVFARRLNWCDK**EV*RFQAMALRNINF*YQISRVDSRAWHLWSW*KLSVQELYEEV*RQIRNLCFTQKGSSQFN*KRLGNG**LQSGKGW*IKKRRLGRCDL*SVS*ENCKPEGRPLRHF**GSTVPSRLY*PLSVDHTK*CFHFTCW*SLSKHI*LPKGSRNTGG*AE*YIEIT*G*VLQVQH  1969
                ++ +  A*+*E IN+  *R   D ++L  KG G+F G  R L*  ED*RWF+I DIL   CEI   +ES Q+G+ FFWIQGSAA L NRS C*L*H**L  I CT *  L LA  GF V++ WA F+S +  F *K*+ C  IFV  + F+A  * CLCRE +DSL+L+*A  E ++YHP I* +LEVW  RVA V + +L +KSF TLC IE LHDHS+   AW*T* GCS*L +QALHKSH  RA+S  W ++DV  *G RSI +L *+*YQWG+* H+SW  H+S I*HNQ T+  C*+DW R A++KGG AEKSE + S*PPFNEW+KDNLL KF*KG*K A V     NWCDK**++* F+AMAL+ IN  YQ  R++S AWH W   K  VQE +EE+*R I + CF Q+ SS  +*KRLGNG**LQ GKGW +K+ RLG C+L* +  E+CK + R L +F**GST+PS L+* +  D+T+*C +FTC * L KHI LP+GSRN GG* +*YIEI *  +LQV H
Subject   2967  VQTSGYA*K*ETINSRP*RCT*DGYKLRAKGLGVF*GF*RRL*PQED*RWFYICDIL*SPCEIPG*IESPQNGMFFFWIQGSAAWLPNRSFC*L*H**LQ*IFCTP*RQLLLALCGFPVKHGWARFKSWYTVFC*K*VPCGFIFVLSSSFKATW*RCLCRE*DDSLVLY*APSEVDYYHP*I*SKLEVWGKRVAFVRHSVLEIKSFPTLCPIERLHDHSHCCRAW*T*GGCS*LPMQALHKSHFRRAMSGRWPQYDVPS*GLRSIRYLR*M*YQWGN*NHKSWWTHISLI*HNQ*THNAC*KDWYRSAKHKGGRAEKSEKVSS*PPFNEWVKDNLLPKF*KG*KVARVLVGGPNWCDK**KI**FKAMALKYINCGYQAPRINSCAWHFWGRQKFLVQEFHEEI*R*ICDFCFAQESSS*LH*KRLGNG**LQGGKGWQVKEGRLGCCNL*GLPQEDCKLKSRSLCNF**GSTIPSWLH*SVFADNTE*CLYFTCR*PLPKHIRLPEGSRNIGG*TK*YIEIA*RQILQV*H  4562

Range 6: 4599 to 4934 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
153.2 bits(328) 0.0 71/112(63%) 0/112(0%) Minus/Plus
Query        2  QTAMSFQEGLHDCSIR*LCHLPQHA*LPFGSV*DLLRCDFGFKL*GEEDCAVLLWHEATHTNFWRINRVKLQIWWSFNFT*LIPH**P*MDDGPIAL*PQLGLGKHYWHQRG  337
                QTAMSFQEGLHDCSI  LCH PQHA*LP  SV*  LRC FGFKL* EED  +LL HEA HT  WR+N +K Q W  FNFT*LIP  *  + D  + L*    LGK+YW + G
Subject   4599  QTAMSFQEGLHDCSICRLCHFPQHA*LPPSSV*VSLRCHFGFKL*REEDRTILLRHEAAHTYIWRVNWLKFQEWRDFNFT*LIPRR*SQVVDSFVTL*S*FRLGKYYWCKCG  4934

Range 7: 2981 to 4921 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
752.5 bits(1636) 0.0 391/647(60%) 0/647(0%) Plus/Minus
Query       15  Q*CLPSPSCG*SAIGPSSIYGHQCGMSHVKLKLHHI*SLTLLIRQKLV*VASCQSKTAXXXXXXXXXXXXXXRRS*TEPKGSHACCGRWHNQRMLQSWSPS*NDMAVWTQTLDSQTSDSQCCTCRTYPQVISIYHSAQPPVLRDPFGSHMCFDRDHQQVK*KHHFVWSTDKGQYSLEGTVEPHQK*RNGLPSGLQFS*ETLQRSQRPNLLFLIYQPLPLCNYHPFPSLF*LNWLEPFWVKQRLRICLQTSS*SSCTESFYQLQRCQARLSTLEI*YQKLIFLRAMAWNR*TXXXXXXXXXXXANTPAAFQPFQNLESKLSLIHSLKGGQEQIVSLFSAHPPLYSAGRCQSSQHVLYVRWLCQIELTCARQD**PQSPH*YHT*HKCQMLRKPQRDTSCLSHHLDTALQICDLWRACTDS*EHPLHVYQAQRR*L*SCSHSMEHKVENDLTASIRFHTEATRYLQTSNSPHILG***LASHDA*CRIRLSFRSLHKHYH*AASKRFGLTKMDLQEIHFQRKNLCLLSKQAHLYSTRNPLNAKNSYHHQVQGIC*SHQCHNQQRLRFDNRAALPWIQKKSTPSCELSTCQKISQEPCKISRIWNHLQSS*C*SPL*TPRKIPKPLVHNWCRSQARLQELLLIASYS*AH  1955
                Q* LPS +  *S    S+   H+ GMSHVKLK  H *+L+ L RQ  V* ASC+S+  +SSS QSLKPK HLR +*TE  GSHACCG+WHN++MLQSWSPS*NDMAV  QTLD QTS SQC TC+   Q ISIYH  QPP+LRDP GS MCF R H+QVK*+HH V S +  Q S EG VEPHQK  N L   LQ S*   QR Q PNL  L  QPLP CNYHPFPSLF* + LE  W KQ+ +I LQ SS*+SCT +F   Q+CQA+L  L  *Y +LI+LRAMA N *  HHLSHQL    +T A FQPFQNL SKLSL HSLKGGQE   SLFSA PPL  A R QS QH L V WLCQI L C  QD * Q PH*YH * K +MLR+PQ  TS   H  D AL+ CDLWRAC  S*EHP HVYQA+++ L*SCS SM HKV NDL +S    T+ATR+ QTSN  HI G***  S  A* + RLS  SLHKH H  A K    TKM+ Q  HFQ+K +  L K+AH   T NP +A+++  H VQ I *SHQCHNQQ+LRF N+AALPWIQKK+ P C LS    ISQ   KIS+I NHLQSS* *S L* P+K P+PL  N   SQ  LQ   LI SY *A+
Subject   2981  Q*YLPSLNYD*SVTKLSTTCDHRRGMSHVKLKSRHS*NLSQLTRQM*V*AASCRSRIVRSSSLQSLKPKWHLRET*TELGGSHACCGKWHNRQMLQSWSPS*NDMAVCIQTLD*QTSCSQCYTCKICLQAISIYHFVQPPILRDPSGSRMCFGRGHRQVK*RHHSVLSANTDQCSQEGIVEPHQKLHNDLLLSLQSS*GRPQRLQHPNLPSLTCQPLPPCNYHPFPSLF*WS*LELSWAKQKSQIYLQISS*NSCTRNFCLPQKCQAQLLILGA*YPQLIYLRAMALNH*IFHHLSHQLGPPTSTLATFQPFQNLGSKLSLTHSLKGGQELTFSLFSARPPLCFADRYQSFQHALCVHWLCQIRLICVHQDL*FQFPH*YHI*RKYRMLRRPQLGTSY*GHLPDIALRKCDLWRACIGS*EHPPHVYQARQQWL*SCSRSMGHKVGNDLISSTECRTKATRFPQTSNLLHIQG***STSLGA*YKTRLSSHSLHKHLHQVALKLLERTKMNPQGTHFQQKTVYQLLKRAHPCLTGNPQSARSNCRHGVQKIY*SHQCHNQQKLRFGNQAALPWIQKKNIPFCGLSIYPGISQGLYKISQI*NHLQSS*G*SLL*KPQKTPRPLARNLYPSQVHLQGRELIVSYF*AY  4921

Range 8: 2981 to 4876 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
728.2 bits(1583) 0.0 393/632(62%) 0/632(0%) Minus/Plus
Query       60  MCLGVRSNQ**FLKARLRSTPVMDQRFWDLSRCSKGTLTLRRLKMVPYS*YXXXXXXXXLAS*EFTRRSALFLDPRKCCSVVKSKPLLIMTLMTLTNSLYLVMVTVFGIQWVSC*VQMGLL*KQA*VLSLKVNLL*IHLCQPKPF*GSSVIMLMQRTK**PYSALGIM*G*SLSPQNMR*VGSLEIASGLCVESYACSQIIFNLVLH*MAA*SQLSPLRLVDVKWMFLTICAGPPQITYLKSCVKVVA*T*CISLRLSKHLTFVLSVISMGRLRSSILAGACQLYLT*PTNI*DMXXXXXXXXXXXRWMS*EE*NDLLLTSFQ*MDQR*LTFQVLKGLKSCRGVC*EA*LV**VMRSLTIPSHGSQEYQLLISNLES*QSCLAPLELVKAFCTRAL*RGLKANS*PLFHPEGL*PIQLKETWKWMIVAKWQRLVNQKKKVGTL*PLKCFLGKLQT*RQAIASFLMRFNCSLQAILTFVC*PYEVMLSFHLLVIPVKAHMTPKRIAQYWGLSRVIY*DYLRVSPTGTTLRVGGL*IQCLSPDCHVISRRAP*LQHSLIMPSSTTCMTSFWLGLRPP*MRFWFQALRRRRLCSLTLA*SNSH*LLANQQG*TSNMVEF*FHMTHSTLMTVDG*R  1955
                +CL VR+NQ   LK  LR   V  QR W L R  K TL  RRLKMV Y *YL   L*D   +*E T+R+ LFLDP KCC V KSK LLIMTLMT  N LY V     G  WVSC* +MG L*K    L LKV+ L IHLC  + F* + V MLMQR +**P   LG  *G* LSP NM+*VGSL  ASGLC    A +QII NLV H* AA*SQ    RLVDV+WMFLT  AGPPQIT+ KS V+ VA  *C  LR SKH  F L+VISMG+L+S IL  A Q YLT*P N * ML+RL   R+ *RW S*E+*   LLTSFQ*M Q *LT QVLKGLKSC+G C  A*LV**VM++L I SHGSQ YQL IS+ E+*Q CLA L   K  CTR  *R LK N * LF P  L*   LKETWKWMIVA+WQRL +Q++KVG L*PL+   G+LQ *+Q I  FLMRFN SL A L  VC* Y +M  FHL V P KAH TP+RIAQYWGL++VIY*D L+   T  TLR GGL IQCL+ DCHVISRRAP*LQH  IMP STTCMTS  LGL  P*M FWFQAL+RRR  + T A*S+SH  LA+Q  * S M  F*FHMTHST M   G*+
Subject   2981  ICLEVRNNQFSSLKVHLRWIQVTGQRSWGLLRFLKETLASRRLKMVLYL*YLIEPL*DPRVN*ESTKRNVLFLDPGKCCLVAKSKLLLIMTLMTSINFLYPVTAIASGTLWVSC*ARMGSL*KLVYGLLLKVSPLRIHLCPLQQF*SNLVKMLMQRMR**PCFVLGTK*G*LLSPLNMK*VGSLGKASGLCAAFCA*NQIISNLVPH*TAA*SQPLLPRLVDVRWMFLTTYAGPPQITFSKSYVREVASI*CT*LRPSKHSIFALNVISMGKLKS*ILVDAYQPYLT*PMNT*CMLKRLVPVRKA*RWTS*EK*KGQLLTSFQ*MGQG*LTSQVLKGLKSCKGACWGA*LV**VMKNLMIQSHGSQVYQLWISSPEN*QLCLALLGQAKVSCTRVS*RDLKVNL*LLFRPGEL*LTPLKETWKWMIVARWQRLASQRRKVGML*PLRSSSGRLQA*KQVIV*FLMRFNYSLLATLICVC*QYGMMPLFHLPVTPAKAHTTPRRIAQYWGLNKVIY*DCLKADLTSITLRAGGLSIQCLNADCHVISRRAP*LQHLPIMPFSTTCMTSS*LGLSLP*MPFWFQALKRRRSYNPTSA*SSSHLHLASQLA*ISRMAGF*FHMTHSTPMIAGG*Q  4876

Nucleotide Sequence (675 letters)

Query ID:ds2016-132_4
Query definition:No definition line
Query length:951
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 16 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
68
136
204
272
340
408
476
544
612
675

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 9

Range 1: 535 to 1203 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
532.6 bits(1156) 0.0 222/223(100%) 0/223(0%) Minus/Plus
Query        6  SLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVDSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLKARSVVLSDGSRYAVDVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL  674
                SLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILV SPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLKARSVVLSDGSRYAVDVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL
Subject    535  SLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVGSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLKARSVVLSDGSRYAVDVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL  1203

Range 2: 534 to 1202 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
484.5 bits(1051) 0.0 216/223(97%) 0/223(0%) Plus/Minus
Query        7  SREPLLPQLMTSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSKSLMPMASKPEKHRMLETRRLLIGVKLSK**QNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKSIWPSEILYW*AQGFKLSGESTRISGGITAVARSMLGLTTSRKVMRSRIDQ**ISSWRKRFLAPVEITRGTNFLSE  675
                SREPLLPQLMTSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLC+PRLRGS+SLMPMASKPEKHRMLET+RLLIGVKL+K* QNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKSIWPSEILYW*AQGFKLSGE TRISGGITAVARSMLGLTTSRKVMRSRIDQ**ISS RKRFLAPVEITRGTNFLSE
Subject    534  SREPLLPQLMTSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCIPRLRGSRSLMPMASKPEKHRMLETKRLLIGVKLNK*WQNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKSIWPSEILYW*AQGFKLSGEPTRISGGITAVARSMLGLTTSRKVMRSRIDQ**ISS*RKRFLAPVEITRGTNFLSE  1202

Range 3: 536 to 1207 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
457.9 bits(993) 0.0 210/224(94%) 0/224(0%) Plus/Minus
Query        2  SLVESHFFHNL*QVKQNPQ*I*SPFQLVCR*ADAISPRQIPYQAF*GFSNKDIF**QHHDAPGSSYACRDLEAPNP*CRWRQNQRNTEC*KLEDY*LG*SSVSDDRILNGGHRPHSVNHQIRPQT*L*ANTYLTMVVNTFHTSYHPEQRAFGPQKFYTGKPKGLSFQESXXXXXXXXXXXXEACWA*PLPGR**DHV*TSNEFHHGEKDSLHL*R*HEGPIS*A  673
                +L ESHFFHNL*QVKQNPQ*I*SPFQLVCR*ADAISPRQI YQAF*GFSNKDIF**QHHDAP SSYA RDLEAP+P*CRWRQNQRNTEC*KL+DY*LG*SS+SD RILNGGHRPHSVNHQIRPQ *L*ANTYLTMVVNTFHTSYHPEQRAFGPQKFYTGKPKGLSFQESQQGFQGVLQ LQEACWA*PLPGR *DHV*TSNEFHH EKDSLHL*R HEGPIS*A
Subject    536  ALAESHFFHNL*QVKQNPQ*I*SPFQLVCR*ADAISPRQILYQAF*GFSNKDIF**QHHDAPESSYAYRDLEAPDP*CRWRQNQRNTEC*KLKDY*LG*SSISDGRILNGGHRPHSVNHQIRPQI*L*ANTYLTMVVNTFHTSYHPEQRAFGPQKFYTGKPKGLSFQESQQGFQGVLQPLQEACWA*PLPGRL*DHV*TSNEFHHEEKDSLHL*RSHEGPIS*A  1207

Range 4: 877 to 1197 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
237.5 bits(512) 0.0 103/107(96%) 0/107(0%) Plus/Minus
Query       12  RATSSTTYDK*SKILNEFNLPSSWFVDKLTQFRLGRFLIRLFEGSQIKIYFSNNIMMHREAAMHAAT*RLQILNADGVKTRETPNVRN*KIIDWGEAQ*VMTEF*ME  332
                RATSSTTYDK*SKILNEFNLPSSWFVDKLTQFRLGRF IRLFEGSQIKIYFSNNIMMHR+AAMH AT*RLQILNADGVKTRETPNVRN*KIIDWGEAQ*VM EF*ME
Subject    877  RATSSTTYDK*SKILNEFNLPSSWFVDKLTQFRLGRFFIRLFEGSQIKIYFSNNIMMHRKAAMHTAT*RLQILNADGVKTRETPNVRN*KIIDWGEAQ*VMAEF*ME  1197

Range 5: 535 to 831 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
229.7 bits(495) 0.0 94/99(95%) 0/99(0%) Plus/Minus
Query      378  SFKQIPT*QWL*IHFTPVTIRSKEHLALRNSILVSPRV*AFRRVNKDFRGYYSCCKKHVGPNHFQEGDEITYRPVMNFIMEKKIPCTCRDNTRDQFLER  674
                SFKQIPT*QWL*IHFTPVTIRSKEHLALRNSILVSPRV*AFRR NKDFRGYYS CKKHVGPNHFQEG EITYRPVMNFIM+KKIPCTCRD+TRDQFLER
Subject    535  SFKQIPT*QWL*IHFTPVTIRSKEHLALRNSILVSPRV*AFRRANKDFRGYYSRCKKHVGPNHFQEGYEITYRPVMNFIMKKKIPCTCRDHTRDQFLER  831

Range 6: 735 to 1199 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
342.9 bits(742) 0.0 147/155(95%) 0/155(0%) Minus/Plus
Query       10  V*NF*GPNALCSGW*LV*NVFTTIVK*VFA*S*VCGLI*WFTLCGRCPPFKILSSLTELHPNQ*SSSF*HSVFLWF*RHRH*GFGASKSRHA*LLPGAS*CCY*NISLFENPQKA**GICRGEIASAYRQTNWKGD*IH*GFCFTCHKLWKKWLS  474
                V*NF*GPNALCSGW*LV*NVFTTIVK*VFA*S*+CGLI*WFTLCGRCPPFKIL SL ELHPNQ*S SF*HSVFLWF*RHRH*G GASKSR+A*LL GAS*CCY*NISLFENPQKA** ICRGEIASAYRQTNWKGD*IH*GFCFTCHKLWKKWLS
Subject    735  V*NF*GPNALCSGW*LV*NVFTTIVK*VFA*S*ICGLI*WFTLCGRCPPFKILPSLIELHPNQ*SFSF*HSVFLWF*RHRH*GSGASKSRYA*LLSGAS*CCY*NISLFENPQKA**RICRGEIASAYRQTNWKGD*IH*GFCFTCHKLWKKWLS  1199

Range 7: 536 to 685 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.9 bits(240) 0.0 46/50(92%) 0/50(0%) Minus/Plus
Query      524  RSRNWSLVLSLQVQGIFFSMMKFITGLYVISSPSWKWLGPTCFLQQL*YP  673
                RSRNWSLV SLQVQGIFF MMKFITGLYVIS PSWKWLGPTCFLQ+L*YP
Subject    536  RSRNWSLV*SLQVQGIFFFMMKFITGLYVIS*PSWKWLGPTCFLQRL*YP  685

Range 8: 737 to 1198 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
337.4 bits(730) 0.0 149/154(97%) 0/154(0%) Minus/Plus
Query       11  IEFLRAKCSLLRMVTGVKCIHNHCQVGICLKLGLWSYLMVHAMRSMSSIQNSVITY*ASPQSIIF*FLTFGVSLVLTPSALRIWSL*VAACIAASRCIMMLLLKYIFI*EPSKSLIRNLPRRNCVSLSTNQLEGRLNSLRILLHLS*VVEEVAL  472
                IEFLRAKCSLLRMVTGVKCIHNHCQVGICLKL LWSYLMVHAMRSMSSIQNS ITY*ASPQSIIF*FLTFGVSLVLTPSALRIWSL*VA CIAA RCIMMLLLKYIFI*EPSKSLI+NLPRRNCVSLSTNQLEGRLNSLRILLHLS*VVEEVAL
Subject    737  IEFLRAKCSLLRMVTGVKCIHNHCQVGICLKLDLWSYLMVHAMRSMSSIQNSAITY*ASPQSIIF*FLTFGVSLVLTPSALRIWSL*VAVCIAAFRCIMMLLLKYIFI*EPSKSLIKNLPRRNCVSLSTNQLEGRLNSLRILLHLS*VVEEVAL  1198

Range 9: 534 to 662 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.9 bits(192) 0.0 40/43(93%) 0/43(0%) Minus/Plus
Query      547  LAQEIGPSCYLYRCKESFSP**NSLLVYT*SHHLPGSG*AQHA  675
                LAQEIGPSC LYRCKESFS **NSLLVYT*SH+LPGSG*AQHA
Subject    534  LAQEIGPSCDLYRCKESFSS**NSLLVYT*SHNLPGSG*AQHA  662

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 9

Range 1: 535 to 1203 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
523.9 bits(1137) 0.0 218/223(98%) 0/223(0%) Minus/Plus
Query        6  SLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVDSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLKARSVVLSDGSRYAVDVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL  674
                SLKKLVPRVIS GARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILV SPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLKA+SVVLSDGSRYAVDVLHSKFCHHLLSFTPI+NLLVSNIRCFSGFDAIGIKDLEPL RGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL
Subject    535  SLKKLVPRVISAGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVGSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLKAKSVVLSDGSRYAVDVLHSKFCHHLLSFTPISNLLVSNIRCFSGFDAIGIKDLEPLIRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL  1203

Range 2: 534 to 1202 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
476.7 bits(1034) 0.0 212/223(95%) 0/223(0%) Plus/Minus
Query        7  SREPLLPQLMTSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSKSLMPMASKPEKHRMLETRRLLIGVKLSK**QNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKSIWPSEILYW*AQGFKLSGESTRISGGITAVARSMLGLTTSRKVMRSRIDQ**ISSWRKRFLAPVEITRGTNFLSE  675
                SREPLLPQL+TSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPR+RGS+SLMPMASKPEKHRMLETRRLLIGVKL+K  QNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKSIWPSEILYW*AQGFKLSGE TRISGGITAVARS+LGLTTSRKVMRSRIDQ* ISS RKRFLAP EITRGTNFLSE
Subject    534  SREPLLPQLITSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRIRGSRSLMPMASKPEKHRMLETRRLLIGVKLNKWWQNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKSIWPSEILYW*AQGFKLSGEPTRISGGITAVARSILGLTTSRKVMRSRIDQ*WISS*RKRFLAPAEITRGTNFLSE  1202

Range 3: 539 to 1207 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
386.4 bits(837) 0.0 183/223(82%) 0/223(0%) Plus/Minus
Query        2  SLVESHFFHNL*QVKQNPQ*I*SPFQLVCR*ADAISPRQIPYQAF*GFSNKDIF**QHHDAPGSSYACRDLEAPNP*CRWRQNQRNTEC*KLEDY*LG*SSVSDDRILNGGHRPHSVNHQIRPQT*L*ANTYLTMVVNTFHTSYHPEQRAFGPQKFYTGKPKGLSFQESXXXXXXXXXXXXEACWA*PLPGR**DHV*TSNEFHHGEKDSLHL*R*HEGPIS*  670
                +L  SHFFHNL*Q KQN Q*I*S  Q  CR*ADAISPRQIPYQAF* FSN+ IF**QHHD P SSYACR+LEAP+ *CRWRQN+RNTEC*K EDY*LG*SS+S  RILNG HRPHSVNH IRPQ  L*ANTYLTMVVNTFHTSYHPEQRAFGPQ+FYTGKPK LSFQESQQGF  V QLLQEA WA*PLPGR**DHV*T+N  HH EKDSLH  R HE PIS*
Subject    539  ALAGSHFFHNL*QAKQNLQ*I*SLSQ*ACR*ADAISPRQIPYQAF*EFSNRGIF**QHHDVPESSYACRELEAPDL*CRWRQNRRNTEC*KPEDY*LG*SSISGGRILNGEHRPHSVNHPIRPQIWL*ANTYLTMVVNTFHTSYHPEQRAFGPQRFYTGKPKDLSFQESQQGFPEVSQLLQEAYWA*PLPGR**DHV*TNNGSHHEEKDSLHQRRSHEEPIS*  1207

Range 4: 538 to 828 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
210.5 bits(453) 0.0 83/97(86%) 0/97(0%) Plus/Minus
Query      381  FKQIPT*QWL*IHFTPVTIRSKEHLALRNSILVSPRV*AFRRVNKDFRGYYSCCKKHVGPNHFQEGDEITYRPVMNFIMEKKIPCTCRDNTRDQFLE  671
                FKQIPT*QWL*IHFTPVTIRSKEHLALR+SILVSPR+*AFRR NKDFR Y+SCCKKH+GPNHFQEGDEITYRP+M+ IM+KKIPCT  D+TR+QFLE
Subject    538  FKQIPT*QWL*IHFTPVTIRSKEHLALRDSILVSPRI*AFRRANKDFRRYHSCCKKHIGPNHFQEGDEITYRPIMDLIMKKKIPCTSGDHTRNQFLE  828

Range 5: 877 to 1194 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
189.8 bits(408) 0.0 84/106(79%) 0/106(0%) Plus/Minus
Query       15  ATSSTTYDK*SKILNEFNLPSSWFVDKLTQFRLGRFLIRLFEGSQIKIYFSNNIMMHREAAMHAAT*RLQILNADGVKTRETPNVRN*KIIDWGEAQ*VMTEF*ME  332
                ATSSTTY+K SKI NEFNL  S  VDKLTQFRLGRFLIRLF+ SQI++YFSNNIMM+R+AAMHAA *RLQI NADGVKT ETPNVRN KI +WG+AQ*V+ EF*ME
Subject    877  ATSSTTYNKRSKIFNEFNLSPSRLVDKLTQFRLGRFLIRLFKSSQIEVYFSNNIMMYRKAAMHAAN*RLQIFNADGVKTGETPNVRNQKITNWGKAQ*VVAEF*ME  1194

Range 6: 735 to 1196 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
283.8 bits(613) 0.0 127/154(82%) 0/154(0%) Minus/Plus
Query       13  V*NF*GPNALCSGW*LV*NVFTTIVK*VFA*S*VCGLI*WFTLCGRCPPFKILSSLTELHPNQ*SSSF*HSVFLWF*RHRH*GFGASKSRHA*LLPGAS*CCY*NISLFENPQKA**GICRGEIASAYRQTNWKGD*IH*GFCFTCHKLWKKWL  474
                V*N *GPNALCSGW*LV*NVFTTIVK*VFA*S +CGLI WFTLCGRC PFKIL  L EL+PN *SS F*HSVFL F*RHRH*  GAS SRHA*LL G S*CCY*NI LFEN  KA**GICRGEIASAYRQ  W+ D*IH* FCF C+KLWKKWL
Subject    735  V*NL*GPNALCSGW*LV*NVFTTIVK*VFA*SQICGLIGWFTLCGRCSPFKILPPLIELYPN**SSGF*HSVFLRF*RHRH*RSGASNSRHA*LLSGTS*CCY*NIPLFENS*KA**GICRGEIASAYRQAYWERD*IH*RFCFACYKLWKKWL  1196

Range 7: 539 to 682 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
93.2 bits(197) 0.0 39/48(81%) 0/48(0%) Minus/Plus
Query      527  SRNWSLVLSLQVQGIFFSMMKFITGLYVISSPSWKWLGPTCFLQQL*Y  670
                SRNW LV S  VQGIFF MM+ I GLYVISSPSWKWLGP CFLQQL*Y
Subject    539  SRNWFLV*SPLVQGIFFFMMRSIIGLYVISSPSWKWLGPICFLQQL*Y  682

Range 8: 737 to 1195 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
271.0 bits(585) 0.0 126/153(82%) 0/153(0%) Minus/Plus
Query       14  IEFLRAKCSLLRMVTGVKCIHNHCQVGICLKLGLWSYLMVHAMRSMSSIQNSVITY*ASPQSIIF*FLTFGVSLVLTPSALRIWSL*VAACIAASRCIMMLLLKYIFI*EPSKSLIRNLPRRNCVSLSTNQLEGRLNSLRILLHLS*VVEEVA  472
                IE LRAKCSLLRMVTGVKCIHNHCQVGICLK  LWSY MVHAMRSM SIQNS  TY*A PQ +IF FLTFGVS VLTPSAL+IWSL* AACIAA R IMMLLLKY  I*E  KSLIRNLPRRNCVSLST+ L  RLNSL+ILL L *VVEEVA
Subject    737  IESLRAKCSLLRMVTGVKCIHNHCQVGICLKPNLWSYRMVHAMRSMFSIQNSATTY*ALPQLVIFWFLTFGVSPVLTPSALKIWSL*FAACIAAFRYIMMLLLKYTSI*ELLKSLIRNLPRRNCVSLSTSLLGERLNSLKILLRLL*VVEEVA  1195

Range 9: 534 to 662 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.5 bits(154) 0.0 34/43(79%) 0/43(0%) Minus/Plus
Query      547  LAQEIGPSCYLYRCKESFSP**NSLLVYT*SHHLPGSG*AQHA  675
                L QEIG SC L  CKESFS **+ LLVYT*SHHLPGSG*AQ+A
Subject    534  LTQEIGSSCDLRWCKESFSS**DPLLVYT*SHHLPGSG*AQYA  662

Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome

Sequence ID: JX559646.1 Length: 8726 Number of Matches: 10

Range 1: 535 to 1203 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
488.6 bits(1060) 0.0 198/223(89%) 0/223(0%) Minus/Plus
Query        6  SLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVDSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLKARSVVLSDGSRYAVDVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL  674
                +L++LVPRVISTGARNLFLHDEIHYWSI DLI FL+V +P+MLLATAVIPPE+LV SPESLNPWAYQY+IS+ Q+LFAPDGNW EMYSQPLS RYLLKARSVVL DGSRY+VD++HSKFCHHLLSFTPI NLL SN+RCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDF+SLVISCGRSGSLL
Subject    535  TLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYKISDDQLLFAPDGNWNEMYSQPLSCRYLLKARSVVLPDGSRYSVDIIHSKFCHHLLSFTPIGNLLTSNMRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFSSLVISCGRSGSLL  1203

Range 2: 537 to 1202 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
372.7 bits(807) 0.0 175/222(79%) 0/222(0%) Plus/Minus
Query        7  SREPLLPQLMTSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSKSLMPMASKPEKHRMLETRRLLIGVKLSK**QNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKSIWPSEILYW*AQGFKLSGESTRISGGITAVARSMLGLTTSRKVMRSRIDQ**ISSWRKRFLAPVEITRGTNFLS  672
                S+EPLLPQL+T+E KSSMN ISLPVGLSIS*R+FASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGS+S MP+ASKPEKH M E +RL +GVKLSK  QNFE   ST *REPS  TTDLA SKYL D GCEYIS QLPSGAKS   S ILY *AQG +LSGE T  SGGITAVA+S+LGL TS+K +RS IDQ**ISS RKRFLAPVEITRGTN  S
Subject    537  SKEPLLPQLITNEEKSSMNFISLPVGLSIS*RSFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSRSFMPIASKPEKHLMFEVKRLPMGVKLSKWWQNFE*MISTE*REPSGSTTDLAFSKYLHDKGCEYISFQLPSGAKSS*SSLILY**AQGLRLSGEPTSTSGGITAVAKSILGLATSKKFIRSLIDQ**ISSCRKRFLAPVEITRGTNLRS  1202

Range 3: 547 to 831 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.9 bits(227) 0.0 48/95(51%) 0/95(0%) Plus/Minus
Query      378  SFKQIPT*QWL*IHFTPVTIRSKEHLALRNSILVSPRV*AFRRVNKDFRGYYSCCKKHVGPNHFQEGDEITYRPVMNFIMEKKIPCTCRDNTRDQ  662
                S + +  *Q L*+H  PV I SKE L + N +L+ PRV AFRR N+ F G +  C+KH   +H QE  +I   PVMNFIM+KKIP TC ++ RDQ
Subject    547  SLQ*VSA*QRL*VHLIPVAIWSKEQLIVTNFVLIGPRVKAFRRTNQHFWGDHRSCQKHTWLSHIQEIYQIAN*PVMNFIMQKKIPSTCGNHARDQ  831

Range 4: 880 to 1197 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
97.3 bits(206) 0.0 49/106(46%) 0/106(0%) Plus/Minus
Query       12  RATSSTTYDK*SKILNEFNLPSSWFVDKLTQFRLGRFLIRLFEGSQIKIYFSNNIMMHREAAMHAAT*RLQILNADGVKTRETPNVRN*KIIDWGEAQ*VMTEF*M  329
                RAT  T Y+ * KILNEF       ++KLT+  L R L+ L +   +K+Y   NIMMH +  +HA T*R +IL A  +KTR+TP+V   KI   GEA+ V+ EF*+
Subject    880  RATPPTAYN**GKILNEFYFSPCGLINKLTKLCLSRLLVWLLKSP*VKVYLGYNIMMHWKTTVHATT*RFKILYAYCIKTRKTPHV*GQKIAYGGEAKQVVAEF*V  1197

Range 5: 759 to 1196 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
116.1 bits(247) 0.0 63/146(43%) 0/146(0%) Minus/Plus
Query       13  ALCSGW*LV*NVFTTIVK*VFA*S*VCGLI*WFTLCGRCPPFKILSSLTELHPNQ*SSSF*HSVFLWF*RHRH*GFGASKSRHA*LLPGAS*CCY*NISLFENPQKA**GICRGEIASAYRQTNWKGD*IH*GFCFTCHKLWKKWL  450
                ALCS W L *+V TT V  +    *+CG  *  TL       KIL  L  LHP++ S    H VF WF* +RH G   SKS HA L   AS*CC  +I L ++  +A  G+C G+ +S Y   + + + IH*GF    +KLW++WL
Subject    759  ALCSRWQLE*DVLTTFVMQILTEG*ICGTA*RLTLLS*YHSLKILPPLA*LHPHRQSFDLKHEVFFWF*CNRHKGS*TSKSWHAQLFSSAS*CCNQDIPLLKDS*EARQGVC*GKASSTY**AHRERNKIH*GFFLISYKLWEEWL  1196

Range 6: 539 to 685 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.4 bits(108) 0.0 26/49(53%) 0/49(0%) Minus/Plus
Query      524  SRNWSLVLSLQVQGIFFSMMKFITGLYVISSPSWKWLGPTCFLQQL*YP  670
                S  WS     QV GIFF MMKFITG   I   SW WL   CF Q  * P
Subject    539  SGGWSRA*FPQVLGIFFCMMKFITGQLAI**ISWMWLSQVCFWQLR*SP  685

Range 7: 542 to 1120 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
138.5 bits(296) 0.0 85/193(44%) 0/193(0%) Plus/Minus
Query       89  R*ADAISPRQIPYQAF*GFSNKDIF**QHHDAPGSSYACRDLEAPNP*CRWRQNQRNTEC*KLEDY*LG*SSVSDDRILNGGHRPHSVNHQIRPQT*L*ANTYLTMVVNTFHTSYHPEQRAFGPQKFYTGKPKGLSFQESXXXXXXXXXXXXEACWA*PLPGR**DHV*TSNEFHHGEKDSLHL*R*HEGPIS  667
                +* D   P+Q P  A *   +K I   QHHDA  ++ AC DLE  +P C   QNQ+NT C + +D   G*S  S  RIL+  ++  SV+ Q  PQ *   +  +T VV+T H+S H EQRA     F T +PKG  FQE+Q    G    L +A  A*P P    D   TSNEFHH EKDS HL +   GP S
Subject    542  Q*VDEALPQQTPCLAS*ESLSKGISWLQHHDALENNCACHDLEVQDPLCLLHQNQKNTSCLRSKDCLWG*S*ASGGRILSE*YQLSSVSRQAVPQI*PSVSICMTKVVSTSHSSCHLEQRAADRH*FCTDRPKG*GFQENQPALLGGSPQLPKAYLA*PHPRNLSDR*LTSNEFHHAEKDS*HLWKSRAGPTS  1120

Range 8: 1145 to 1198 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.9 bits(48) 0.0 10/18(56%) 0/18(0%) Plus/Minus
Query       11  ESHFFHNL*QVKQNPQ*I  64
                +SH  H+L* +++NPQ*I
Subject   1145  KSHSSHSL*LMRKNPQ*I  1198

Range 9: 758 to 1198 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
111.5 bits(237) 0.0 67/147(46%) 0/147(0%) Minus/Plus
Query       11  CSLLRMVTGVKCIHNHCQVGICLKLGLWSYLMVHAMRSMSSIQNSVITY*ASPQSIIF*FLTFGVSLVLTPSALRIWSL*VAACIAASRCIMMLLLKYIFI*EPSKSLIRNLPRRNCVSLSTNQLEGRLNSLRILLHLS*VVEEVAL  451
                CSLL+M TG++C HN C      +L LW  L  HA + +S  QNS  T  ASP   IF*  T GV LVL   A RI +L*V AC    +CIMML  +Y F *   +S  R+L R++ V+L  +    + NSLRI  H  * V  VAL
Subject    758  CSLLQMATGMRCTHNLCHADTY*RLDLWYCLTAHATQLISFTQNSATTCLASPP*AIF*PQT*GVFLVLMQ*A*RILNL*VVACTVVFQCIMML*PRYTFT*GLLRSQTRSLLRQSFVNLLISPQGEK*NSLRIFPH*L*AVGGVAL  1198

Range 10: 543 to 662 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.5 bits(82) 0.0 22/40(55%) 0/40(0%) Minus/Plus
Query      547  EIGPSCYLYRCKESFSP**NSLLVYT*SHHLPGSG*AQHA  666
                E+GP+   +RC ESFS **NSLLV   S    G G*A++A
Subject    543  EVGPARDFHRC*ESFSA**NSLLVN*RSDKFLGCG*AKYA  662

Rupestris stem pitting associated virus strain SG1, complete genome

Sequence ID: AY881626.1 Length: 8742 Number of Matches: 10

Range 1: 535 to 1203 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
488.1 bits(1059) 0.0 198/223(89%) 0/223(0%) Minus/Plus
Query        6  SLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVDSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLKARSVVLSDGSRYAVDVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL  674
                +L++LVPRVISTGARNLFLHDEIHYWSI DLI FL+V +P+MLLATAVIPPE+LV SPESLNPWAYQY+IS+ Q+LFAPDGNW EMYSQPLS RYLLKARSVVL DGSRY VD++HSKFCHHLLSFTPI NLL SN+RCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDF+SLVISCGRSGSLL
Subject    535  TLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYKISDDQLLFAPDGNWNEMYSQPLSCRYLLKARSVVLPDGSRYLVDIIHSKFCHHLLSFTPIGNLLTSNLRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFSSLVISCGRSGSLL  1203

Range 2: 537 to 1202 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
369.9 bits(801) 0.0 174/222(78%) 0/222(0%) Plus/Minus
Query        7  SREPLLPQLMTSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSKSLMPMASKPEKHRMLETRRLLIGVKLSK**QNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKSIWPSEILYW*AQGFKLSGESTRISGGITAVARSMLGLTTSRKVMRSRIDQ**ISSWRKRFLAPVEITRGTNFLS  672
                S+EPLLPQL+T+E KSSMN ISLPVGLSIS*R+FASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGS+S MP+ASKPEKH   E +RL +GVKLSK  QNFE   ST *REPS  TTDLA SKYL D GCEYIS QLPSGAKS   S ILY *AQG +LSGE T  SGGITAVA+S+LGL TS+K +RS IDQ**ISS RKRFLAPVEITRGTN  S
Subject    537  SKEPLLPQLITNEEKSSMNFISLPVGLSIS*RSFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSRSFMPIASKPEKHLKFEVKRLPMGVKLSKWWQNFE*MISTK*REPSGSTTDLAFSKYLHDKGCEYISFQLPSGAKSS*SSLILY**AQGLRLSGEPTSTSGGITAVAKSILGLATSKKFIRSLIDQ**ISSCRKRFLAPVEITRGTNLRS  1202

Range 3: 547 to 831 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
107.4 bits(228) 0.0 48/95(51%) 0/95(0%) Plus/Minus
Query      378  SFKQIPT*QWL*IHFTPVTIRSKEHLALRNSILVSPRV*AFRRVNKDFRGYYSCCKKHVGPNHFQEGDEITYRPVMNFIMEKKIPCTCRDNTRDQ  662
                S + +  *Q L*+H  PV I SKE L + N +L+ PRV AFRR N+ F G +  C+KH   +H QE  +I   PVMNFIM+KKIP TC ++ RDQ
Subject    547  SLQ*VSA*QRL*VHLIPVAIWSKEQLIITNFVLIGPRVKAFRRTNQHFWGDHRSCQKHTWLSHIQEIYQIAN*PVMNFIMQKKIPSTCGNHARDQ  831

Range 4: 880 to 1197 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.3 bits(195) 0.0 47/106(44%) 0/106(0%) Plus/Minus
Query       12  RATSSTTYDK*SKILNEFNLPSSWFVDKLTQFRLGRFLIRLFEGSQIKIYFSNNIMMHREAAMHAAT*RLQILNADGVKTRETPNVRN*KIIDWGEAQ*VMTEF*M  329
                RAT  T Y+ * KILNEF       ++KLT+  L R L+ L +   +K+Y   +IMMH +  +HA  *R +IL A  +KTR+TP V   KI   GEA+ V+ EF*+
Subject    880  RATPPTAYN**GKILNEFYFSPCGLINKLTKLCLSRLLVWLLKSP*VKVYLGYDIMMHWKTTVHATA*RFKILYAYCIKTRKTPQV*GQKIAYGGEAKQVVAEF*V  1197

Range 5: 542 to 1120 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
133.5 bits(285) 0.0 83/193(43%) 0/193(0%) Plus/Minus
Query       89  R*ADAISPRQIPYQAF*GFSNKDIF**QHHDAPGSSYACRDLEAPNP*CRWRQNQRNTEC*KLEDY*LG*SSVSDDRILNGGHRPHSVNHQIRPQT*L*ANTYLTMVVNTFHTSYHPEQRAFGPQKFYTGKPKGLSFQESXXXXXXXXXXXXEACWA*PLPGR**DHV*TSNEFHHGEKDSLHL*R*HEGPIS  667
                +* D   P+Q P  A *   +K I   +HHDA  ++ AC  LE  +P C   QNQ+NT   + +D   G*S  S  RIL+  ++P SV+ Q  PQ *   +  +T VV+T H+S H EQRA     F T +PKG  FQE+Q    G    L +A  A*P P    D   TSNEFHH EKDS HL +   GP S
Subject    542  Q*VDEALPQQTPCLAS*ESLSKGISWLRHHDALENNCACHGLEVQDPLCLLHQNQKNTSSLRSKDCLWG*S*ASGGRILSE*YQPSSVSRQAVPQI*PSVSICMTKVVSTSHSSCHLEQRAADHH*FCTDRPKG*GFQENQPALLGGSPQLPKAYLA*PHPRNLSDR*LTSNEFHHAEKDS*HLWKSRAGPTS  1120

Range 6: 1145 to 1198 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.9 bits(48) 0.0 10/18(56%) 0/18(0%) Plus/Minus
Query       11  ESHFFHNL*QVKQNPQ*I  64
                +SH  H+L* +++NPQ*I
Subject   1145  KSHSSHSL*LMRKNPQ*I  1198

Range 7: 759 to 1196 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.0 bits(225) 0.0 61/146(42%) 0/146(0%) Minus/Plus
Query       13  ALCSGW*LV*NVFTTIVK*VFA*S*VCGLI*WFTLCGRCPPFKILSSLTELHPNQ*SSSF*HSVFLWF*RHRH*GFGASKSRHA*LLPGAS*CCY*NISLFENPQKA**GICRGEIASAYRQTNWKGD*IH*GFCFTCHKLWKKWL  450
                ALCS W L *+V TT V  +    *+CG  *  TL G     KIL  L  LHP++ S      VF WF* +RH G   SK  HA L   AS*C   +I L ++  +A  G+C G+ +S Y   + + + IH*GF    +KLW++WL
Subject    759  ALCSRWQLE*DVLTTFVMQILTEG*ICGTA*RLTLLG*YHSLKILPPLA*LHPHRQSFDLKLEVFFWF*CNRHKGS*TSKPWHAQLFSSAS*CRNQDIPLLKDS*EARQGVC*GKASSTY**AHRERNKIH*GFFLISYKLWEEWL  1196

Range 8: 539 to 685 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.4 bits(108) 0.0 26/49(53%) 0/49(0%) Minus/Plus
Query      524  SRNWSLVLSLQVQGIFFSMMKFITGLYVISSPSWKWLGPTCFLQQL*YP  670
                S  WS     QV GIFF MMKFITG   I   SW WL   CF Q  * P
Subject    539  SGGWSRA*FPQVLGIFFCMMKFITGQLAI**ISWMWLSQVCFWQLR*SP  685

Range 9: 758 to 1198 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
105.1 bits(223) 0.0 65/147(44%) 0/147(0%) Minus/Plus
Query       11  CSLLRMVTGVKCIHNHCQVGICLKLGLWSYLMVHAMRSMSSIQNSVITY*ASPQSIIF*FLTFGVSLVLTPSALRIWSL*VAACIAASRCIMMLLLKYIFI*EPSKSLIRNLPRRNCVSLSTNQLEGRLNSLRILLHLS*VVEEVAL  451
                CSLL+M TG++C HN C      +L LW  L  HA   +S  QNS  T  ASP   IF*  T GV LVL   A RI +L*  AC    +CIMM   +Y F *   +S  R+L R++ V+L  +    + NSLRI  H  * V  VAL
Subject    758  CSLLQMATGMRCTHNLCHADTY*RLDLWYCLTAHATWLISFTQNSATTCLASPP*AIF*PQT*GVFLVLMQ*A*RILNL*AVACTVVFQCIMMS*PRYTFT*GLLRSQTRSLLRQSFVNLLISPQGEK*NSLRIFPH*L*AVGGVAL  1198

Range 10: 543 to 662 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.5 bits(82) 0.0 22/40(55%) 0/40(0%) Minus/Plus
Query      547  EIGPSCYLYRCKESFSP**NSLLVYT*SHHLPGSG*AQHA  666
                E+GP+   +RC ESFS **NSLLV   S    G G*A++A
Subject    543  EVGPARDFHRC*ESFSA**NSLLVN*RSDKFLGCG*AKYA  662

Grapevine rupestris stem pitting associated virus isolate GRSPaV WA, complete genome

Sequence ID: KC427107.1 Length: 8742 Number of Matches: 10

Range 1: 535 to 1203 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
487.7 bits(1058) 0.0 198/223(89%) 0/223(0%) Minus/Plus
Query        6  SLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVDSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLKARSVVLSDGSRYAVDVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL  674
                +L++LVPRVISTGARNLFLHDEIHYWSI DLI FL+V +P+MLLATAVIPPE+LV SPESLNPWAYQY+IS+ Q+LFAPDGNW EMYSQPLS RYLLKARSVVL DGSRY VD++HSKFCHHLLSFTPI NLL SN+RCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDF+SLVISCGRSGSLL
Subject    535  TLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYKISDDQLLFAPDGNWNEMYSQPLSCRYLLKARSVVLPDGSRYLVDIIHSKFCHHLLSFTPIGNLLTSNMRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFSSLVISCGRSGSLL  1203

Range 2: 537 to 1202 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
372.7 bits(807) 0.0 175/222(79%) 0/222(0%) Plus/Minus
Query        7  SREPLLPQLMTSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSKSLMPMASKPEKHRMLETRRLLIGVKLSK**QNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKSIWPSEILYW*AQGFKLSGESTRISGGITAVARSMLGLTTSRKVMRSRIDQ**ISSWRKRFLAPVEITRGTNFLS  672
                S+EPLLPQL+T+E KSSMN ISLPVGLSIS*R+FASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGS+S MP+ASKPEKH M E +RL +GVKLSK  QNFE   ST *REPS  TTDLA SKYL D GCEYIS QLPSGAKS   S ILY *AQG +LSGE T  SGGITAVA+S+LGL TS+K +RS IDQ**ISS RKRFLAPVEITRGTN  S
Subject    537  SKEPLLPQLITNEEKSSMNFISLPVGLSIS*RSFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSRSFMPIASKPEKHLMFEVKRLPMGVKLSKWWQNFE*MISTK*REPSGSTTDLAFSKYLHDKGCEYISFQLPSGAKSS*SSLILY**AQGLRLSGEPTSTSGGITAVAKSILGLATSKKFIRSLIDQ**ISSCRKRFLAPVEITRGTNLRS  1202

Range 3: 547 to 831 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.9 bits(227) 0.0 48/95(51%) 0/95(0%) Plus/Minus
Query      378  SFKQIPT*QWL*IHFTPVTIRSKEHLALRNSILVSPRV*AFRRVNKDFRGYYSCCKKHVGPNHFQEGDEITYRPVMNFIMEKKIPCTCRDNTRDQ  662
                S + +  *Q L*+H  PV I SKE L + N +L+ PRV AFRR N+ F G +  C+KH   +H QE  +I   PVMNFIM+KKIP TC ++ RDQ
Subject    547  SLQ*VSA*QRL*VHLIPVAIWSKEQLIVTNFVLIGPRVKAFRRTNQHFWGDHRSCQKHTWLSHIQEIYQIAN*PVMNFIMQKKIPSTCGNHARDQ  831

Range 4: 880 to 1197 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.7 bits(196) 0.0 47/106(44%) 0/106(0%) Plus/Minus
Query       12  RATSSTTYDK*SKILNEFNLPSSWFVDKLTQFRLGRFLIRLFEGSQIKIYFSNNIMMHREAAMHAAT*RLQILNADGVKTRETPNVRN*KIIDWGEAQ*VMTEF*M  329
                RAT  T Y+ * KILNEF       ++KLT+  L R L+ L +   +K+Y   +IMMH +  +HA  *R +IL A  +KTR+TP+V   KI   GEA+ V+ EF*+
Subject    880  RATPPTAYN**GKILNEFYFSPCGLINKLTKLCLSRLLVWLLKSP*VKVYLGYDIMMHWKTTVHATA*RFKILYAYCIKTRKTPHV*GQKIAYGGEAKQVVAEF*V  1197

Range 5: 759 to 1196 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
111.0 bits(236) 0.0 62/146(42%) 0/146(0%) Minus/Plus
Query       13  ALCSGW*LV*NVFTTIVK*VFA*S*VCGLI*WFTLCGRCPPFKILSSLTELHPNQ*SSSF*HSVFLWF*RHRH*GFGASKSRHA*LLPGAS*CCY*NISLFENPQKA**GICRGEIASAYRQTNWKGD*IH*GFCFTCHKLWKKWL  450
                ALCS W L *+V TT V  +    *+CG  *  TL G     KIL  L  LHP++ S    H VF WF* +RH G   SK  HA L   AS*C   +I L ++  +A  G+C G+ +S Y   + + + IH*GF    +KLW++WL
Subject    759  ALCSRWQLE*DVLTTFVMQILTEG*ICGTA*RLTLLG*YHSLKILPPLA*LHPHRQSFDLKHEVFFWF*CNRHKGS*TSKPWHAQLFSSAS*CRNQDIPLLKDS*EARQGVC*GKASSTY**AHRERNKIH*GFFLISYKLWEEWL  1196

Range 6: 539 to 685 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.4 bits(108) 0.0 26/49(53%) 0/49(0%) Minus/Plus
Query      524  SRNWSLVLSLQVQGIFFSMMKFITGLYVISSPSWKWLGPTCFLQQL*YP  670
                S  WS     QV GIFF MMKFITG   I   SW WL   CF Q  * P
Subject    539  SGGWSRA*FPQVLGIFFCMMKFITGQLAI**ISWMWLSQVCFWQLR*SP  685

Range 7: 542 to 1120 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
138.1 bits(295) 0.0 84/193(44%) 0/193(0%) Plus/Minus
Query       89  R*ADAISPRQIPYQAF*GFSNKDIF**QHHDAPGSSYACRDLEAPNP*CRWRQNQRNTEC*KLEDY*LG*SSVSDDRILNGGHRPHSVNHQIRPQT*L*ANTYLTMVVNTFHTSYHPEQRAFGPQKFYTGKPKGLSFQESXXXXXXXXXXXXEACWA*PLPGR**DHV*TSNEFHHGEKDSLHL*R*HEGPIS  667
                +* D   P+Q P  A *   +K I   +HHDA  ++ AC  LE  +P C   QNQ+NT C + +D   G*S  S  RIL+  ++P SV+ Q  PQ *   +  +T VV+T H+S H EQRA     F T +PKG  FQE+Q    G    L +A  A*P P    D   TSNEFHH EKDS HL +   GP S
Subject    542  Q*VDEALPQQTPCLAS*ESLSKGISWLRHHDALENNCACHGLEVQDPLCLLHQNQKNTSCLRSKDCLWG*S*ASGGRILSE*YQPSSVSRQAVPQI*PSVSICMTKVVSTSHSSCHLEQRAADRH*FCTDRPKG*GFQENQPALLGGSPQLPKAYLA*PHPRNLSDR*LTSNEFHHAEKDS*HLWKSRAGPTS  1120

Range 8: 1145 to 1198 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.9 bits(48) 0.0 10/18(56%) 0/18(0%) Plus/Minus
Query       11  ESHFFHNL*QVKQNPQ*I  64
                +SH  H+L* +++NPQ*I
Subject   1145  KSHSSHSL*LMRKNPQ*I  1198

Range 9: 758 to 1198 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
105.1 bits(223) 0.0 65/147(44%) 0/147(0%) Minus/Plus
Query       11  CSLLRMVTGVKCIHNHCQVGICLKLGLWSYLMVHAMRSMSSIQNSVITY*ASPQSIIF*FLTFGVSLVLTPSALRIWSL*VAACIAASRCIMMLLLKYIFI*EPSKSLIRNLPRRNCVSLSTNQLEGRLNSLRILLHLS*VVEEVAL  451
                CSLL+M TG++C HN C      +L LW  L  HA   +S  QNS  T  ASP   IF*  T GV LVL   A RI +L*  AC    +CIMM   +Y F *   +S  R+L R++ V+L  +    + NSLRI  H  * V  VAL
Subject    758  CSLLQMATGMRCTHNLCHADTY*RLDLWYCLTAHATWLISFTQNSATTCLASPP*AIF*PQT*GVFLVLMQ*A*RILNL*AVACTVVFQCIMMS*PRYTFT*GLLRSQTRSLLRQSFVNLLISPQGEK*NSLRIFPH*L*AVGGVAL  1198

Range 10: 543 to 662 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.5 bits(82) 0.0 22/40(55%) 0/40(0%) Minus/Plus
Query      547  EIGPSCYLYRCKESFSP**NSLLVYT*SHHLPGSG*AQHA  666
                E+GP+   +RC ESFS **NSLLV   S    G G*A++A
Subject    543  EVGPARDFHRC*ESFSA**NSLLVN*RSDKFLGCG*AKYA  662

Nucleotide Sequence (367 letters)

Query ID:ds2016-132_4
Query definition:No definition line
Query length:951
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 16 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
37
74
111
148
185
222
259
296
333
367

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus complete genome, genomic RNA, isolate GRSPaV MG

Sequence ID: FR691076.1 Length: 8749 Number of Matches: 8

Range 1: 1192 to 1557 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
293.4 bits(634) 0.0 121/122(99%) 0/122(0%) Minus/Plus
Query        2  GSLLMPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDITSDFFEHLFLFSCLSELIEENVEVVMDNSWFGLGDPQFNRQRAPFFLGSSYWLNSKFSVEHKFSGAI  367
                GSLLMPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDIT DFFEHLFLFSCLSELIEENVEVVMDNSWFGLGDPQFNRQRAPFFLGSSYWLNSKFSVEHKFSGAI
Subject   1192  GSLLMPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDITPDFFEHLFLFSCLSELIEENVEVVMDNSWFGLGDPQFNRQRAPFFLGSSYWLNSKFSVEHKFSGAI  1557

Range 2: 1192 to 1557 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
267.3 bits(577) 0.0 117/122(96%) 0/122(0%) Plus/Minus
Query        2  NGT*KLMLN*EFGVKPI*GPKEEWGPLTIELRIPKSKPRIIHDHLNVLLYQLAEAGEKK*MLKEIRSYIY*VNRKVKWLK*VNK*I**TLPKI*RKPGKSIWHHSAEE*YDQLRNVRHKQRA  367
                NGT*KLMLN*EFGVKPI*GPKEEWGPLTIELRIPKSKPRIIHDHLNVLLYQLAEAGEKK*MLKEIRSY+Y VNRKV+WLK*VNK*I *TL KI*RKPGKSIWHHSAEE*YDQLRNVRHKQRA
Subject   1192  NGT*KLMLN*EFGVKPI*GPKEEWGPLTIELRIPKSKPRIIHDHLNVLLYQLAEAGEKK*MLKEIRSYVYQVNRKVEWLK*VNK*IQ*TLSKI*RKPGKSIWHHSAEE*YDQLRNVRHKQRA  1557

Range 3: 1193 to 1555 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
260.0 bits(561) 0.0 116/121(96%) 0/121(0%) Plus/Minus
Query        4  WHLKTYAQLRIWS*ANMRTQGRMGPSDD*IADPQVQTKNYP*PPQRSPLSTR*GRRKEINAQRNQKLYLLS*PKS*MAQVSKQMNLVNTPENLKKAWQEHLASFGRRMI*PT*KC*A*AES  366
                WHLKTYAQLRIWS*ANMRTQGRMGPSDD*IADPQVQTKNYP*PPQRSPLSTR*GRRKEINAQRNQ+L L S*PKS*MAQVSKQMN VNT ENLKKAWQEHLASFGRRMI*PT*KC*A*AES
Subject   1193  WHLKTYAQLRIWS*ANMRTQGRMGPSDD*IADPQVQTKNYP*PPQRSPLSTR*GRRKEINAQRNQELCLPS*PKS*MAQVSKQMNPVNTLENLKKAWQEHLASFGRRMI*PT*KC*A*AES  1555

Range 4: 1194 to 1556 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
239.9 bits(522) 0.0 119/121(98%) 0/121(0%) Plus/Minus
Query        3  MAPENLCSTENLELSQYEDPRKNGAL*RLNCGSPSPNQELSMTTSTFSSINSLRQEKRNKCSKKSEVISTKLTEKLNGXXXXXXXXXXXXRKFEESLARAFGIIRQKNDMTNLEMLGISRE  365
                MAPENLCSTENLELSQYEDPRKNGAL*RLNCGSPSPNQELSMTTSTFSSINSLRQEKRNKCSKKS V+STKLTEKLNGSSE*TNESSEHSRKFEESLARAFGIIRQKNDMTNLEMLGISRE
Subject   1194  MAPENLCSTENLELSQYEDPRKNGAL*RLNCGSPSPNQELSMTTSTFSSINSLRQEKRNKCSKKSGVMSTKLTEKLNGSSE*TNESSEHSRKFEESLARAFGIIRQKNDMTNLEMLGISRE  1556

Range 5: 1379 to 1555 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
140.8 bits(301) 0.0 59/59(100%) 0/59(0%) Minus/Plus
Query        4  YFFSPASAS**RRTLRWSWIILGLDLGIRNSIVRGPHSSLGPHIGLTPNSQLSISFQVP  180
                YFFSPASAS**RRTLRWSWIILGLDLGIRNSIVRGPHSSLGPHIGLTPNSQLSISFQVP
Subject   1379  YFFSPASAS**RRTLRWSWIILGLDLGIRNSIVRGPHSSLGPHIGLTPNSQLSISFQVP  1555

Range 6: 1193 to 1345 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
117.5 bits(250) 0.0 48/51(94%) 0/51(0%) Minus/Plus
Query      214  ALCLCLTFLSWSYHSSAE*CQMLLPGFLQIFGSVH*IHLFTHLSHLTFRLT  366
                ALCLCLTFLSWSYHSSAE*CQMLLPGFLQIF SVH IHLFTHLSH TFRLT
Subject   1193  ALCLCLTFLSWSYHSSAE*CQMLLPGFLQIFESVHWIHLFTHLSHSTFRLT  1345

Range 7: 1194 to 1358 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
113.3 bits(241) 0.0 50/55(91%) 0/55(0%) Minus/Plus
Query      201  LSAYA*HF*VGHIILLPNDAKCSCQAFFKFSGVFTRFICLLT*AI*LFG*LSRYN  365
                LSAYA*HF*VGHIILLPNDAKCSCQAFFKFS VFT FICLLT*AI LFG*L R+N
Subject   1194  LSAYA*HF*VGHIILLPNDAKCSCQAFFKFSRVFTGFICLLT*AIQLFG*LGRHN  1358

Range 8: 1395 to 1502 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.7 bits(196) 0.0 36/36(100%) 0/36(0%) Minus/Plus
Query       57  PQRVDRGER*GGHG*FLVWTWGSAIQSSEGPILPWV  164
                PQRVDRGER*GGHG*FLVWTWGSAIQSSEGPILPWV
Subject   1395  PQRVDRGER*GGHG*FLVWTWGSAIQSSEGPILPWV  1502

Grapevine rupestris stem pitting associated virus isolate TEMP BR replicase, 24.4 kDa protein, 12.8 kDa protein, 8.4 kDa protein, and 28 kDa protein genes, complete cds

Sequence ID: KX925556.1 Length: 8700 Number of Matches: 8

Range 1: 1181 to 1546 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
287.4 bits(621) 0.0 116/122(95%) 0/122(0%) Minus/Plus
Query        2  GSLLMPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDITSDFFEHLFLFSCLSELIEENVEVVMDNSWFGLGDPQFNRQRAPFFLGSSYWLNSKFSVEHKFSGAI  367
                GSLLMPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDIT DFFEHLFLFSCL+ELIEENVEV MDNSWFGLGDPQFNRQR PFFLGSSYWLNSKFS+EHKFSGA+
Subject   1181  GSLLMPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDITPDFFEHLFLFSCLNELIEENVEVAMDNSWFGLGDPQFNRQRTPFFLGSSYWLNSKFSIEHKFSGAV  1546

Range 2: 1183 to 1542 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
227.2 bits(494) 0.0 112/120(93%) 0/120(0%) Plus/Minus
Query        6  APENLCSTENLELSQYEDPRKNGAL*RLNCGSPSPNQELSMTTSTFSSINSLRQEKRNKCSKKSEVISTKLTEKLNGXXXXXXXXXXXXRKFEESLARAFGIIRQKNDMTNLEMLGISRE  365
                APENLCS ENLELSQYEDPRKNG L RLNCGSPSPNQELSM TSTFSSINSLRQEKRNKCSKKS V+STKLTEKLNGSSE*T ESSEHSRKFEESLARAFGIIRQKNDMTNLEMLGIS+E
Subject   1183  APENLCSIENLELSQYEDPRKNGVLWRLNCGSPSPNQELSMATSTFSSINSLRQEKRNKCSKKSGVMSTKLTEKLNGSSE*TKESSEHSRKFEESLARAFGIIRQKNDMTNLEMLGISKE  1542

Range 3: 1181 to 1546 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
224.2 bits(483) 0.0 102/122(84%) 0/122(0%) Plus/Minus
Query        2  NGT*KLMLN*EFGVKPI*GPKEEWGPLTIELRIPKSKPRIIHDHLNVLLYQLAEAGEKK*MLKEIRSYIY*VNRKVKWLK*VNK*I**TLPKI*RKPGKSIWHHSAEE*YDQLRNVRHKQRA  367
                +GT*KLML  EFGVKPI*GP+EEWGPL IEL + KSKPRIIH HLNVLLY L EA EK+*MLKEIRSY+Y*VNRKVKWLK*VNK I**TL KI*RKP K IWHHSAEE*YD L NVRHKQRA
Subject   1181  DGT*KLMLYREFGVKPI*GPQEEWGPLAIELWVSKSKPRIIHGHLNVLLY*LIEAREKE*MLKEIRSYVY*VNRKVKWLK*VNKRI**TLSKI*RKPSKGIWHHSAEE*YD*LGNVRHKQRA  1546

Range 4: 1182 to 1541 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
199.9 bits(430) 0.0 97/120(81%) 0/120(0%) Plus/Minus
Query        7  HLKTYAQLRIWS*ANMRTQGRMGPSDD*IADPQVQTKNYP*PPQRSPLSTR*GRRKEINAQRNQKLYLLS*PKS*MAQVSKQMNLVNTPENLKKAWQEHLASFGRRMI*PT*KC*A*AES  366
                HLKTYA  RIWS*ANMRT GRMG   D*I   QVQTKNYP PPQRSPL T *G+RK INAQRNQ+L LLS*PKS*MAQVSKQ NLVNT ENLKKA Q HLASFGRRMI* T KC*A*A+S
Subject   1182  HLKTYALSRIWS*ANMRTPGRMGSFGD*IVGLQVQTKNYPWPPQRSPLLTH*GKRKGINAQRNQELCLLS*PKS*MAQVSKQKNLVNTLENLKKA*QGHLASFGRRMI*LTWKC*A*AKS  1541

Range 5: 1368 to 1544 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
108.3 bits(230) 0.0 47/59(80%) 0/59(0%) Minus/Plus
Query        4  YFFSPASAS**RRTLRWSWIILGLDLGIRNSIVRGPHSSLGPHIGLTPNSQLSISFQVP  180
                Y FS AS S**RRTLRW WIILGLDL   NSI +GPHSS GPHIGLTPNS+ SISFQVP
Subject   1368  YSFSLASMS**RRTLRWPWIILGLDLETHNSIAKGPHSSWGPHIGLTPNSR*SISFQVP  1544

Range 6: 1183 to 1347 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
104.6 bits(222) 0.0 47/55(85%) 0/55(0%) Minus/Plus
Query      201  LSAYA*HF*VGHIILLPNDAKCSCQAFFKFSGVFTRFICLLT*AI*LFG*LSRYN  365
                L AYA*HF V HIILLPNDAKC C AFFKFS VFTRF CLLT*AI*LFG*LSR+N
Subject   1183  LFAYA*HFQVSHIILLPNDAKCPC*AFFKFSRVFTRFFCLLT*AI*LFG*LSRHN  1347

Range 7: 1182 to 1337 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
100.0 bits(212) 0.0 46/52(88%) 0/52(0%) Minus/Plus
Query      211  ALCLCLTFLSWSYHSSAE*CQMLLPGFLQIFGSVH*IHLFTHLSHLTFRLT*  366
                ALCLCLTF S SYHSSAE*CQM L GFLQIF SVH*I LFTHLSHLTFRLT*
Subject   1182  ALCLCLTFPS*SYHSSAE*CQMPLLGFLQIFESVH*ILLFTHLSHLTFRLT*  1337

Range 8: 1384 to 1542 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
69.8 bits(146) 0.0 42/53(79%) 0/53(0%) Minus/Plus
Query        6  PQRVDRGER*GGHG*FLVWTWGSAIQSSEGPILPWVXXXXXXXXXXXA*VFRC  164
                PQ V+RGER*GGHG*FLVWTW   IQS + PILP VLILA*LQIL  A*VFRC
Subject   1384  PQ*VNRGER*GGHG*FLVWTWRPTIQSPKDPILPGVLILA*LQILDRA*VFRC  1542

Grapevine rupestris stem pitting associated virus isolate SK704 C, complete genome

Sequence ID: KX274276.1 Length: 8726 Number of Matches: 7

Range 1: 1193 to 1558 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
287.0 bits(620) 0.0 118/122(97%) 0/122(0%) Minus/Plus
Query        2  GSLLMPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDITSDFFEHLFLFSCLSELIEENVEVVMDNSWFGLGDPQFNRQRAPFFLGSSYWLNSKFSVEHKFSGAI  367
                GSLLMPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDIT DFFEHLFLFSCL+ELIEENVEVVMDNSWFGLGD QFNRQRAPFFLGSSYWLNSKFSVEHKFSGA+
Subject   1193  GSLLMPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDITPDFFEHLFLFSCLNELIEENVEVVMDNSWFGLGDLQFNRQRAPFFLGSSYWLNSKFSVEHKFSGAV  1558

Range 2: 1195 to 1554 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
230.3 bits(501) 0.0 115/120(96%) 0/120(0%) Plus/Minus
Query        6  APENLCSTENLELSQYEDPRKNGAL*RLNCGSPSPNQELSMTTSTFSSINSLRQEKRNKCSKKSEVISTKLTEKLNGXXXXXXXXXXXXRKFEESLARAFGIIRQKNDMTNLEMLGISRE  365
                APENLCSTENLELSQYEDPRKNGAL RLNC SPSPNQELSMTTSTFSSINSLRQEKRNKCSKKS V+STKLTEKLNGSSE*TNESSEHSRKFEESLARAFGIIRQKNDMTNLEMLGIS+E
Subject   1195  APENLCSTENLELSQYEDPRKNGALWRLNCRSPSPNQELSMTTSTFSSINSLRQEKRNKCSKKSGVMSTKLTEKLNGSSE*TNESSEHSRKFEESLARAFGIIRQKNDMTNLEMLGISKE  1554

Range 3: 1193 to 1558 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
215.5 bits(464) 0.0 99/122(81%) 0/122(0%) Plus/Minus
Query        2  NGT*KLMLN*EFGVKPI*GPKEEWGPLTIELRIPKSKPRIIHDHLNVLLYQLAEAGEKK*MLKEIRSYIY*VNRKVKWLK*VNK*I**TLPKI*RKPGKSIWHHSAEE*YDQLRNVRHKQRA  367
                N T*K MLN*EFG+KPI*GPKE+  PL IEL+IPKSKPRIIHDHLNVLLYQL EA EKK*+LKEIRS ++ +NR+VKWLK*VNK*I** L KI*RKP KSIWHHSAEE*YD LRNVRH  RA
Subject   1193  NCT*KFMLN*EFGIKPI*GPKEKRSPLAIELQIPKSKPRIIHDHLNVLLYQLIEAREKK*VLKEIRSDVHQINREVKWLK*VNK*I**ALSKI*RKPSKSIWHHSAEE*YD*LRNVRH**RA  1558

Range 4: 1194 to 1553 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
207.7 bits(447) 0.0 97/120(81%) 0/120(0%) Plus/Minus
Query        7  HLKTYAQLRIWS*ANMRTQGRMGPSDD*IADPQVQTKNYP*PPQRSPLSTR*GRRKEINAQRNQKLYLLS*PKS*MAQVSKQMNLVNTPENLKKAWQEHLASFGRRMI*PT*KC*A*AES  366
                HLK YAQLRIW+*ANMRTQG+  PS D*IADPQVQTKNYP*PPQRSPLST *G+RKEI+AQRNQ+    +*P+S*MAQVSKQMNLV+T ENLKKA QEHLASFGRRMI* T*KC*A  +S
Subject   1194  HLKIYAQLRIWN*ANMRTQGKTEPSGD*IADPQVQTKNYP*PPQRSPLSTH*GKRKEISAQRNQE*CPPN*PRS*MAQVSKQMNLVSTLENLKKA*QEHLASFGRRMI*LT*KC*ALVKS  1553

Range 5: 1194 to 1553 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.9 bits(419) 0.0 98/120(82%) 0/120(0%) Minus/Plus
Query        7  ALCLCLTFLSWSYHSSAE*CQMLLPGFLQIFGSVH*IHLFTHLSHLTFRLT*XXXXXXXXXIYFFSPASAS**RRTLRWSWIILGLDLGIRNSIVRGPHSSLGPHIGLTPNSQLSISFQV  366
                AL  CLTFLS SYHSSAE*CQMLL GFLQIF S H*IHLFTHLSHLT RL     LLISLS YFFS AS S**RRTLRWSWIILGLDLGI NSI RG   SLGPHIGL PNSQLSI+FQV
Subject   1194  ALY*CLTFLS*SYHSSAE*CQMLLLGFLQIFESAH*IHLFTHLSHLTSRLIWWTSLLISLSTYFFSLASMS**RRTLRWSWIILGLDLGICNSIARGLRFSLGPHIGLIPNSQLSINFQV  1553

Range 6: 1207 to 1359 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.4 bits(191) 0.0 41/51(80%) 0/51(0%) Minus/Plus
Query      201  A*HF*VGHIILLPNDAKCSCQAFFKFSGVFTRFICLLT*AI*LFG*LSRYN  353
                A*HF*V HIILLPNDAKCSC AFFKFS V TRFICLLT*AI*L G*   ++
Subject   1207  A*HF*VSHIILLPNDAKCSC*AFFKFSRVLTRFICLLT*AI*LLG*FGGHH  1359

Range 7: 1396 to 1503 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.3 bits(169) 0.0 31/36(86%) 0/36(0%) Minus/Plus
Query       57  PQRVDRGER*GGHG*FLVWTWGSAIQSSEGPILPWV  164
                PQ VDRGER*GGHG*FLVWTWGSAIQS EG + PWV
Subject   1396  PQ*VDRGER*GGHG*FLVWTWGSAIQSPEGSVFPWV  1503

Grapevine rupestris stem pitting associated virus isolate CS BR, complete genome

Sequence ID: KX958435.1 Length: 8743 Number of Matches: 7

Range 1: 1193 to 1558 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
285.2 bits(616) 0.0 117/122(96%) 0/122(0%) Minus/Plus
Query        2  GSLLMPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDITSDFFEHLFLFSCLSELIEENVEVVMDNSWFGLGDPQFNRQRAPFFLGSSYWLNSKFSVEHKFSGAI  367
                GSLLMPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDIT+DFFEHLFLFSCL+ELIEENVE VMDNSWFGLGD QFNRQRAPFFLGSSYWLNSKFS+EHKFSGAI
Subject   1193  GSLLMPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDITTDFFEHLFLFSCLNELIEENVEEVMDNSWFGLGDLQFNRQRAPFFLGSSYWLNSKFSIEHKFSGAI  1558

Range 2: 1195 to 1557 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
211.3 bits(459) 0.0 104/121(86%) 0/121(0%) Plus/Minus
Query        3  MAPENLCSTENLELSQYEDPRKNGAL*RLNCGSPSPNQELSMTTSTFSSINSLRQEKRNKCSKKSEVISTKLTEKLNGXXXXXXXXXXXXRKFEESLARAFGIIRQKNDMTNLEMLGISRE  365
                MAPENLCS ENLELSQYEDPRKNGAL*RLNC SPSPNQELS+T+STFSSI+SLRQEKRNKCSKKS VISTKLTEKL GS E TNESSEHSRKFEESLA A GIIRQK D+TNLE+ G+S+E
Subject   1195  MAPENLCSIENLELSQYEDPRKNGAL*RLNCKSPSPNQELSITSSTFSSISSLRQEKRNKCSKKSVVISTKLTEKLKGSREYTNESSEHSRKFEESLASALGIIRQKKDITNLEIFGMSKE  1557

Range 3: 1194 to 1556 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
155.5 bits(333) 0.0 76/121(63%) 0/121(0%) Plus/Minus
Query        4  WHLKTYAQLRIWS*ANMRTQGRMGPSDD*IADPQVQTKNYP*PPQRSPLSTR*GRRKEINAQRNQKLYLLS*PKS*MAQVSKQMNLVNTPENLKKAWQEHLASFGRRMI*PT*KC*A*AES  366
                WHLK YAQL+IW+*ANM+TQGR G SDD*IA+P+ QT+N P*P Q SP    *G+++EINA+RNQ  Y LS* +S* AQ + QMN VNT  NLK+A Q H ASFGRR I P *+  A*A++
Subject   1194  WHLKIYAQLKIWN*ANMKTQGRTGLSDD*IANPRAQTRNCP*PLQHSPRLVH*GKKREINARRNQ**YPLS*LRS*RAQGNTQMNPVNTLGNLKRA*QVH*ASFGRRKISPI*RYSA*AKN  1556

Range 4: 1196 to 1558 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
151.4 bits(324) 0.0 73/121(60%) 0/121(0%) Plus/Minus
Query        2  NGT*KLMLN*EFGVKPI*GPKEEWGPLTIELRIPKSKPRIIHDHLNVLLYQLAEAGEKK*MLKEIRSYIY*VNRKVKWLK*VNK*I**TLPKI*RKPGKSIWHHSAEE*YDQLRNVRHKQR  364
                NGT*K MLN*+FG++PI* PKEE G LTIEL+IP+ KP I+H+  N+LL    +A ++K*ML+EI S I+*V+ +VK LK ++K*I *TL +I*R+P K I HHSAEE Y Q R++RH+QR
Subject   1196  NGT*KFMLN*KFGIEPI*RPKEERGSLTIELQIPEPKPGIVHNLFNILLD*FIKARKEK*MLEEISSDIH*VD*EVKGLKGIHK*IQ*TLSEI*REPSKCIRHHSAEERYHQFRDIRHEQR  1558

Range 5: 1197 to 1556 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.4 bits(252) 0.0 73/120(61%) 0/120(0%) Minus/Plus
Query        4  LCLCLTFLSWSYHSSAE*CQMLLPGFLQIFGSVH*IHLFTHLSHLTFRLT*XXXXXXXXXIYFFSPASAS**RRTLRWSWIILGLDLGIRNSIVRGPHSSLGPHIGLTPNSQLSISFQVP  363
                LC C   L+W Y SSAE*C M L G LQI  SVH IHL   LS LT + T* I LLIS SIYF   A  +* RR L+  W I GL  GI NSIVR P SSLG HIG  PN QLSI+FQVP
Subject   1197  LCSCRISLNW*YLSSAE*CLMHLLGSLQISESVHWIHLCIPLSPLTSQST*WISLLISSSIYFSFLALMN*SRRMLKRLWTIPGLGSGICNSIVREPRSSLGLHIGSIPNFQLSINFQVP  1556

Range 6: 1201 to 1359 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
64.8 bits(135) 0.0 30/53(57%) 0/53(0%) Minus/Plus
Query      201  AYA*HF*VGHIILLPNDAKCSCQAFFKFSGVFTRFICLLT*AI*LFG*LSRYN  359
                A+A + *+G I LLPNDA C+C A FKF  VFT FIC+  *A+*L   LS Y+
Subject   1201  AHAEYL*IGDIFLLPNDA*CTC*ALFKFPRVFTGFICVFP*AL*LLSQLSGYH  1359

Range 7: 1408 to 1557 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.6 bits(128) 0.0 34/50(68%) 0/50(0%) Minus/Plus
Query        3  DRGER*GGHG*FLVWTWGSAIQSSEGPILPWVXXXXXXXXXXXA*VFRCH  152
                +RGE * G+G FLVW  G AIQSSE P+LPWV ILA  QI +*A*+FRCH
Subject   1408  NRGEC*RGYGQFLVWARGFAIQSSESPVLPWVFILAQFQIFN*A*IFRCH  1557

Rupestris stem pitting associated virus strain BS, complete genome

Sequence ID: AY881627.1 Length: 8743 Number of Matches: 7

Range 1: 1192 to 1557 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
284.2 bits(614) 0.0 117/122(96%) 0/122(0%) Minus/Plus
Query        2  GSLLMPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDITSDFFEHLFLFSCLSELIEENVEVVMDNSWFGLGDPQFNRQRAPFFLGSSYWLNSKFSVEHKFSGAI  367
                GSLLMPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDIT DFFEHLFLFSCL+ELIEENVE VMDNSWFGLGD QFNRQRAPFFLGSSYWLNSKFS+EHKFSGAI
Subject   1192  GSLLMPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDITPDFFEHLFLFSCLNELIEENVEEVMDNSWFGLGDLQFNRQRAPFFLGSSYWLNSKFSIEHKFSGAI  1557

Range 2: 1194 to 1556 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
211.3 bits(459) 0.0 104/121(86%) 0/121(0%) Plus/Minus
Query        3  MAPENLCSTENLELSQYEDPRKNGAL*RLNCGSPSPNQELSMTTSTFSSINSLRQEKRNKCSKKSEVISTKLTEKLNGXXXXXXXXXXXXRKFEESLARAFGIIRQKNDMTNLEMLGISRE  365
                MAPENLCS ENLELSQYEDPRKNGAL*RLNC SPSPNQELS+T+STFSSI+SLRQEKRNKCSKKS VISTKLTEKL GS E TNESSEHSRKFEESLA A GIIRQK D+TNLE+ G+S+E
Subject   1194  MAPENLCSIENLELSQYEDPRKNGAL*RLNCKSPSPNQELSITSSTFSSISSLRQEKRNKCSKKSGVISTKLTEKLKGSREYTNESSEHSRKFEESLASALGIIRQKKDITNLEIFGMSKE  1556

Range 3: 1192 to 1557 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
164.2 bits(352) 0.0 79/122(65%) 0/122(0%) Plus/Minus
Query        2  NGT*KLMLN*EFGVKPI*GPKEEWGPLTIELRIPKSKPRIIHDHLNVLLYQLAEAGEKK*MLKEIRSYIY*VNRKVKWLK*VNK*I**TLPKI*RKPGKSIWHHSAEE*YDQLRNVRHKQRA  367
                NGT*K MLN*+FG++PI* PKEE G LTIEL+IP+ KPRI+H+  N+LL    EA ++K*MLKEIRS I+*V+ +VK LK ++K*I *TL +I*R+P K I HHSAEE Y Q RN+RH+QRA
Subject   1192  NGT*KFMLN*KFGIEPI*RPKEERGSLTIELQIPEPKPRIVHNLFNILLD*FIEARKEK*MLKEIRSDIH*VD*EVKGLKGIHK*IQ*TLSEI*REPSKCIRHHSAEERYYQFRNIRHEQRA  1557

Range 4: 1193 to 1555 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
163.7 bits(351) 0.0 80/121(66%) 0/121(0%) Plus/Minus
Query        4  WHLKTYAQLRIWS*ANMRTQGRMGPSDD*IADPQVQTKNYP*PPQRSPLSTR*GRRKEINAQRNQKLYLLS*PKS*MAQVSKQMNLVNTPENLKKAWQEHLASFGRRMI*PT*KC*A*AES  366
                WHLK YAQL+IW+*ANM+TQGR G SDD*IA+P+ QTKN P*P Q SP    *G+++EINAQRNQ+ Y LS* +S* AQ + QMN VNT  NLK+A Q H ASFGRR I P *K  A*A+S
Subject   1193  WHLKIYAQLKIWN*ANMKTQGRTGLSDD*IANPRAQTKNCP*PLQHSPRLVH*GKKREINAQRNQE*YPLS*LRS*RAQGNTQMNPVNTLGNLKRA*QVH*ASFGRRKILPI*KYSA*AKS  1555

Range 5: 1193 to 1555 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
129.8 bits(277) 0.0 78/121(64%) 0/121(0%) Minus/Plus
Query        4  ALCLCLTFLSWSYHSSAE*CQMLLPGFLQIFGSVH*IHLFTHLSHLTFRLT*XXXXXXXXXIYFFSPASAS**RRTLRWSWIILGLDLGIRNSIVRGPHSSLGPHIGLTPNSQLSISFQVP  366
                ALC C  FL+W Y SSAE*C M L G LQI  SVH IHL   LS LT + T* I LLISLSIYF   AS +* RR L+  W ILGL  GI NSIVR P SSLG HIG  PN QLSI+FQVP
Subject   1193  ALCSCRIFLNW*YLSSAE*CLMHLLGSLQISESVHWIHLCIPLSPLTSQST*WISLLISLSIYFSFLASMN*SRRMLKRLWTILGLGSGICNSIVREPRSSLGLHIGSIPNFQLSINFQVP  1555

Range 6: 1194 to 1358 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
69.3 bits(145) 0.0 32/55(58%) 0/55(0%) Minus/Plus
Query      201  LSAYA*HF*VGHIILLPNDAKCSCQAFFKFSGVFTRFICLLT*AI*LFG*LSRYN  365
                L A+A +F*+G+I LLPNDA C+C A FKF  VFT FIC+  *A+*L   LS Y+
Subject   1194  LFAHAEYF*IGNIFLLPNDA*CTC*ALFKFPRVFTGFICVFP*AL*LLSQLSGYH  1358

Range 7: 1395 to 1556 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
65.2 bits(136) 0.0 36/54(67%) 0/54(0%) Minus/Plus
Query        3  PQRVDRGER*GGHG*FLVWTWGSAIQSSEGPILPWVXXXXXXXXXXXA*VFRCH  164
                PQ  +RGE * G+G FLVW  G AIQSSE P+LPWV ILA  QI +*A*+FRCH
Subject   1395  PQ*TNRGEC*RGYGQFLVWARGFAIQSSESPVLPWVFILAQFQIFN*A*IFRCH  1556

Nucleotide Sequence (941 letters)

Query ID:ds2016-132_4
Query definition:No definition line
Query length:951
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 16 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
95
190
285
380
475
570
665
760
855
941

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate TEMP BR replicase, 24.4 kDa protein, 12.8 kDa protein, 8.4 kDa protein, and 28 kDa protein genes, complete cds

Sequence ID: KX925556.1 Length: 8700 Number of Matches: 13

Range 1: 5177 to 5683 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
379.5 bits(822) 0.0 156/169(92%) 0/169(0%) Plus/Plus
Query      423  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMLEAVREFEEKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHHTK  929
                WFKTHIPLSNLESTRARWVGKMALKEHREVRCG+E TQQFFDEHR G  EQLSNACERFESIYPRHKGNDS+TFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLD+FLSKVPLNASHN+N++ EAVREFE KKASKSAATIENHSGRSCRDWLLDVALIFMKSQH TK
Subject   5177  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGHEVTQQFFDEHRGGAGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKVPLNASHNSNMLNEAVREFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTK  5683

Range 2: 4763 to 5125 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
295.7 bits(639) 0.0 118/121(98%) 0/121(0%) Plus/Plus
Query        9  LTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVSVGRNEGVREEKLCGDPWLKVMLFLGQ  371
                LTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVS+G+NEG+REEKLCGDPWLKVMLFLGQ
Subject   4763  LTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVSLGKNEGIREEKLCGDPWLKVMLFLGQ  5125

Range 3: 5176 to 5682 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
292.9 bits(633) 0.0 132/169(78%) 0/169(0%) Minus/Minus
Query      422  LVWC*DFIKIRATSSNQSLQDLPE*FSIVAALLLAFFSSNSRTASSIRFALWLAFSGTFERKVSSRNFPYGFARLNLAAST*GFENFRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSKLLNGIWVLNH  928
                LV C DFIKIRATS++QSL DLPE FSIVAALLLAFF+SNS TAS     L LAFSGT +RK SS+NFPYGFARLNLAAST GFEN RRF TAMRKV ES PLCLG MLSNLSHALL+CS  P LCSSKNC V S P  TSRCSF AI PTHLALVDSKLL G+WVLNH
Subject   5176  LVQCCDFIKIRATSNSQSLHDLPEWFSIVAALLLAFFASNSLTASLSMLEL*LAFSGTLDRKESSKNFPYGFARLNLAASTWGFENLRRFRTAMRKVMESFPLCLG*MLSNLSHALLSCSPAPPLCSSKNCCVTSWPQRTSRCSFKAILPTHLALVDSKLLKGMWVLNH  5682

Range 4: 4762 to 4995 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
159.1 bits(341) 0.0 66/78(85%) 0/78(0%) Minus/Minus
Query        8  ITFSPLFAVKK**SGFPAKCDRKLSTLKPVMFTRSRLWLKRDKAVNHRRSSV*KESCDIRIPPCLKFNPVDSPKVSVS  241
                +TFSPL AVKK * G PAKC+RKLSTLKPVMFT+S+LWLKRDKAV+HRRSSV*KESCDIRIPPCLKF+PVDSP V VS
Subject   4762  MTFSPLLAVKKW*RGLPAKCERKLSTLKPVMFTKSKLWLKRDKAVSHRRSSV*KESCDIRIPPCLKFSPVDSPNVRVS  4995

Range 5: 5056 to 5109 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.7 bits(76) 0.0 14/18(78%) 0/18(0%) Minus/Minus
Query      302  MTFSQGSPHSFSSLTPSF  355
                +TFS GSPH+FSSL PSF
Subject   5056  ITFSHGSPHNFSSLIPSF  5109

Range 6: 4763 to 5683 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
370.4 bits(802) 0.0 169/307(55%) 0/307(0%) Minus/Minus
Query        9  FGVVLRLHKN*GNIQQPIPTRSTGMIFYCRCTFACFLFLKFSHSFKHQVCIVACIQWNL*KESVK*KLPIWLCAPQFGSFDLRL*KF*TFPHGHEKGH*IIAFMSWVYAFKSFTCVAQLLASSTPVFIKELLGRFITTSHFTVFLQRHLSNPPGPG*FQVT*WDMGFKPFLI*AFRLKLLNFAILILAKEKHDL*PRITTQLLLSHPFIPPNANIETIKEVGLTGKQVPYHIFPAFCC*KVIERFPSKMRQKAFHPQTGDVH*IKIVAKTR*SCQPPAIICVKGIM*YKNPSMLEVQPSRFTESKRE  929
                FG +L LHKN* NIQQPIP     M+ Y  CT   FL  +  H     V IV  I WNL +E ++*+LPIW C PQFG F+L L*KF TF + HE+G+ II+FM WV AFKSFTC+AQLL S+T V IKELL   + T+H  +    H ++PPG G* Q+ * D+GF+PF I*AF   L NF ILIL +EKH+  P IT QLLLS+  I   A+IETI+EV LT KQV Y I   F C KV++ F SKM +K FHPQT +V+ I+I+A+ R*S +PP+I+ +KGIM*YK+  M EVQPS FT+ K E
Subject   4763  FGAML*LHKN*SNIQQPIPA*PA*MVLYSCCTLTGFLCFELPHCLIKHVGIVTGI*WNLRQEGIQ*ELPIWFCPPQFGRFNLGL*KFETFSNSHEEGYGIISFMPWVNAFKSFTCIAQLLTSTTSVLIKELLRYLMATAHLPMLF*GHFAHPPGSG*LQIA*GDVGFEPFFI*AFHFHLFNFTILILTQEKHNFQPWITAQLLLSNSLIFTKADIETIEEVRLTWKQVSYDILSTFSCQKVVKGFASKM*EKTFHPQTCNVYQIQIMAEAR*SSKPPSIVSMKGIM*YKDSPMFEVQPS*FTKCKSE  5683

Range 7: 4764 to 5540 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
275.5 bits(595) 0.0 146/259(56%) 0/259(0%) Plus/Plus
Query       10  SRLLSVNLLG*TSSMEGFLYHMIPFTQMIAGG*QLYLVLATILI**TSPV*GWKAFCRILLGNRSITF*QQKAGKM**GTCFPVSPTSLMVSMLALGGMKG*ERRSCVVILG*RSCFSLAKMRIAKLRSLSLNAQMRNGLKPISH*VTWNQPGPGGLERWR*RNTVK*DVVMKRPNSSLMNTGVEEASN*ATHVKDLKAYTQDIKAMIQ*PFSWP*GNV*NFQSLKSKLPN*GAQSHMGSFYLTLSFQRFH*MQATMQT  786
                S L  VN LG*TS+M   LYHMIPF   I GG  LYL  A I I *T  V*GWK F  ILL N   TF*Q K  +M   TCF VS TS MVSM AL  M+  ERRSC VI G*+ CFS  KMRI KL+    NAQM+NG KP S *  W+QP PGG  +W *++  +  V M+  ++SLM+T V   S+*A HVKDLKA+TQ IK MI *P SW   NV NFQS + K PN*G Q+HMGS Y   S  RFH*M  T+ T
Subject   4764  SLLHLVNQLG*TSNMGESLYHMIPFILTIDGGLLLYLASAIIWIW*TLQV*GWKVFSHILLANPFTTF*QLKVERMSYETCFQVSLTSSMVSMSALVKMRELERRSCAVIHG*KLCFSWVKMRIVKLKRWKWNAQMKNGSKPTSP*AIWSQPEPGGWAKWP*KSIGRCAVAMR*RSNSLMSTEVVLVSS*AMHVKDLKAFTQGIKEMIP*PSSWLFENVSNFQSPRLKRPN*GGQNHMGSSYWIPSCLRFH*MPVTIPT  5540

Range 8: 5628 to 5684 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.3 bits(73) 0.0 15/19(79%) 0/19(0%) Plus/Plus
Query      874  GIGCWMLP*FL*SLNTTPN  930
                GIGCWML *FL*S N  PN
Subject   5628  GIGCWMLL*FL*SHNIAPN  5684

Range 9: 4758 to 5534 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
268.7 bits(580) 0.0 139/259(54%) 0/259(0%) Minus/Minus
Query        4  HCGLHSVEPLKGKCQVETSHMALRASIWQLRLEALKILDVSSRP*ERSLNHCLYVLGICFQIFHMRCSIARFFHTCVHQRTVGSFHNHISLHGVPSTPSFQPTWPWLIPSYLMGYGF*TIPHLSIQTQAPQLRNPHLGQGKA*PLAKDHHTASPLSPLHSAQR*H*NH*RSWAHREASPLSHFPRFLLLKSDRAVSQQNATESFPPSNR*CSLDQDCG*NEIKLSTTGDHLCERNHVI*ESLHA*SSTQ*IHRK*A*AI  780
                +C  H VEP  G+  V TSHM L ASIW L+  ALKI DV  +P* R  NH LY LG CFQIFHM CS A   H C HQR     H H +       P   PTW WL P+ L G GF*TI HLSI   + QL NPHL  GKA*  A DH T SPL   H  Q *H*NH*RS AH EA  + H   F L KS + V QQN  E+FPPSN *C  + + G*+EIK   T D   ERNHVI*   H *SS Q IH+ * *A+
Subject   4758  NCDWHLVEP*TGRNPVRTSHMVLPASIWPLQPGALKI*DVFEQP*GRLWNHFLYALGKCFQIFHMHCSAAHQHHLCAHQRIAALPHGHSAPPDALLRPFCPPTWLWLTPNCLRGCGF*TILHLSIPFPSLQLHNPHLDPGKA*LSAMDHRTTSPL*FPHFYQG*H*NH*RS*AHLEAGLV*HSLHF*LSKSGKGVCQQNVRENFPPSNL*CLPNPNYG*SEIKQ*ATVDRQYERNHVI*GFPHV*SSAQLIHQM*E*AV  5534

Range 10: 5628 to 5684 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.3 bits(75) 0.0 13/19(68%) 0/19(0%) Minus/Minus
Query      874  VWCGVETS*KLGQHPATNP  930
                +WC V TS*KL QHP  NP
Subject   5628  IWCNVVTS*KLEQHPTANP  5684

Range 11: 5083 to 5682 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
193.1 bits(415) 0.0 101/200(50%) 0/200(0%) Plus/Plus
Query      329  VW*SLAKGHAFPWPR*GLRS*GA*V*MLK*GMV*NPYPIK*LGINQGQVGWKDGVEGTP*SEMWL*NDPTVL**TQVWKKRAIEQRM*KI*KHIPKT*RQ*FSDLSHGREETSKIFKASSRSCQIEARKAIWEVST*HFPFKGSTECKPQCKPDA*SCARI*GKESKQKCSDNRKSFR*IL*GLVAGCCPNFYEVSTPHQ  928
                V *S+A+ +AFP  R*GL S*     MLK* MV NP+P+K  G+NQ QVG ++G++      +W * +  +L** Q W   A EQ M*KI*KH+PK *R+*F +L HG  +TS+IFKA   S QIEA K IWEV T   P  GST+C+ Q +   *    +  KES+ +CS+ R+ FR ++ GL  GCC NFYEV+T HQ
Subject   5083  VR*SMAESYAFPGSR*GL*S*RDGNGMLK*RMVQNPHPLKQFGVNQSQVGGQNGLKRASGGALWP*GNAAIL**AQRWCW*AAEQCM*KI*KHLPKA*RK*FHNLPHGCSKTSQIFKAPG*SGQIEAGKTIWEVLTGFLPV*GSTKCQSQFQHA**GSEGVRSKESQ*ECSNYREPFRQVMQGLAVGCCSNFYEVTTLHQ  5682

Range 12: 4900 to 5052 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.5 bits(152) 0.0 30/51(59%) 0/51(0%) Plus/Plus
Query      146  EHHRFEGGKLSVAFCWETALSLFNSKKRGKCDKGLASR*AQLL*WFQC*RW  298
                +H+RFEGGK S+ FCW+T L LF+S K  +C    ASR*A LL WFQC  W
Subject   4900  KHYRFEGGKFSLTFCWQTPLPLFDS*KWRECHTRPASR*A*LLQWFQCQPW  5052

Range 13: 4762 to 4842 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
42.8 bits(87) 0.0 17/27(63%) 0/27(0%) Plus/Plus
Query        8  AHAYFR*IYWVELQAWRDSYIT*FLSH  88
                AH+Y  *I W ELQ W + YIT*FLS+
Subject   4762  AHSYIW*INWAELQTWGNPYIT*FLSY  4842

Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome

Sequence ID: JX559646.1 Length: 8726 Number of Matches: 13

Range 1: 5188 to 5694 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
379.5 bits(822) 0.0 156/169(92%) 0/169(0%) Plus/Plus
Query      423  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMLEAVREFEEKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHHTK  929
                WFKTHIPLSNLESTRARWVGKMALKE+REVRCGYE TQQFFDEHR G  EQLSNACERFESIYPRHKGNDS+TFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLD+FLSKVPLNA+HN+N+  EAVREFEEKKASKSAATIENHSGRSCRDWLLDVALIFMKSQH TK
Subject   5188  WFKTHIPLSNLESTRARWVGKMALKEYREVRCGYEVTQQFFDEHRGGAGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKVPLNANHNSNMFNEAVREFEEKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTK  5694

Range 2: 4774 to 5136 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
293.9 bits(635) 0.0 118/121(98%) 0/121(0%) Plus/Plus
Query        9  LTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVSVGRNEGVREEKLCGDPWLKVMLFLGQ  371
                LTLTFGESTGLNFK+GGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVS+G+NEGVREEKLCGDPWLKVMLFLGQ
Subject   4774  LTLTFGESTGLNFKNGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVSIGKNEGVREEKLCGDPWLKVMLFLGQ  5136

Range 3: 5187 to 5693 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
287.9 bits(622) 0.0 131/169(78%) 0/169(0%) Minus/Minus
Query      422  LVWC*DFIKIRATSSNQSLQDLPE*FSIVAALLLAFFSSNSRTASSIRFALWLAFSGTFERKVSSRNFPYGFARLNLAAST*GFENFRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSKLLNGIWVLNH  928
                LV C DF+K+RATS++QSL DLPE FSIVAALLLAFFSSNSRTAS     L LAFSGT +RK SS+NFPYGFARL+LAAST GFENFRRF TAMR V ES PLCLG MLSNLSHALL+CS  P LCSSKNC V S*P  TSR SF AI PTHLALVDSKLL G+WVLNH
Subject   5187  LVQCCDFMKMRATSNSQSLHDLPEWFSIVAALLLAFFSSNSRTASLNILEL*LAFSGTLDRKESSKNFPYGFARLSLAASTWGFENFRRFRTAMRNVMESFPLCLG*MLSNLSHALLSCSPAPPLCSSKNC*VTS*PQRTSRYSFKAILPTHLALVDSKLLKGMWVLNH  5693

Range 4: 4773 to 5006 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
155.0 bits(332) 0.0 65/78(83%) 0/78(0%) Minus/Minus
Query        8  ITFSPLFAVKK**SGFPAKCDRKLSTLKPVMFTRSRLWLKRDKAVNHRRSSV*KESCDIRIPPCLKFNPVDSPKVSVS  241
                +TFSPL AVKK * G PAKC+RKLSTLKPVMFT+S+LWLKRDKAV+HRRSSV*KESCD+RIPP LKFNPVDSP V VS
Subject   4773  MTFSPLLAVKKW*RGLPAKCERKLSTLKPVMFTKSKLWLKRDKAVSHRRSSV*KESCDMRIPPFLKFNPVDSPNVRVS  5006

Range 5: 5067 to 5120 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.5 bits(82) 0.0 15/18(83%) 0/18(0%) Minus/Minus
Query      302  MTFSQGSPHSFSSLTPSF  355
                +TFS GSPH+FSSLTPSF
Subject   5067  ITFSHGSPHNFSSLTPSF  5120

Range 6: 4774 to 5694 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
378.6 bits(820) 0.0 165/307(54%) 0/307(0%) Minus/Minus
Query        9  FGVVLRLHKN*GNIQQPIPTRSTGMIFYCRCTFACFLFLKFSHSFKHQVCIVACIQWNL*KESVK*KLPIWLCAPQFGSFDLRL*KF*TFPHGHEKGH*IIAFMSWVYAFKSFTCVAQLLASSTPVFIKELLGRFITTSHFTVFLQRHLSNPPGPG*FQVT*WDMGFKPFLI*AFRLKLLNFAILILAKEKHDL*PRITTQLLLSHPFIPPNANIETIKEVGLTGKQVPYHIFPAFCC*KVIERFPSKMRQKAFHPQTGDVH*IKIVAKTR*SCQPPAIICVKGIM*YKNPSMLEVQPSRFTESKRE  929
                FG +LRLH+N  NIQQPIPT    M+ Y RCT   F FL+  H     + IV  I WNL +E ++*+LPIW C PQFG F+L L*KF*T  + HE+ + II+FM WV AFKSFTC+ QLL S+T V IKELL   I T+H  +    HL++PPG G*  + * ++GF+PF I*AF   L NF +LIL +EKH+  P +TTQLLLS+  I PNA+IETI+EV LT KQV Y I P F C*K+++RF SKM +K FHPQT DV+ I+I+A+ R S +PP+++ +KG+M*Y+N  + E+QPS  T+ + E
Subject   4774  FGTMLRLHENESNIQQPIPT*PA*MVLYSRCTLTGFFFLELPHCLIEHIGIVIGI*WNLRQERIQ*ELPIWFCPPQFGCFNLGL*KF*TLSNSHEECYGIISFMPWVNAFKSFTCITQLLTSTTSVLIKELLSYLIATAHLPILF*GHLTHPPGSG*L*IA*GNVGFEPFFI*AFLFHLFNFTVLILTQEKHNFQPWVTTQLLLSNSLIFPNADIETIEEVRLTWKQVSYDILPTFSC*KMVKRFTSKM*EKTFHPQTCDVYQIQIMAEARQSSKPPSVVSMKGVM*YENSPIFEIQPS*LTKCESE  5694

Range 7: 4772 to 5545 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
258.1 bits(557) 0.0 133/258(52%) 0/258(0%) Minus/Minus
Query        7  HCGLHSVEPLKGKCQVETSHMALRASIWQLRLEALKILDVSSRP*ERSLNHCLYVLGICFQIFHMRCSIARFFHTCVHQRTVGSFHNHISLHGVPSTPSFQPTWPWLIPSYLMGYGF*TIPHLSIQTQAPQLRNPHLGQGKA*PLAKDHHTASPLSPLHSAQR*H*NH*RSWAHREASPLSHFPRFLLLKSDRAVSQQNATESFPPSNR*CSLDQDCG*NEIKLSTTGDHLCERNHVI*ESLHA*SSTQ*IHRK*A*A  780
                +C  H VEP  GK  V TSHM L AS+W L+  ALKILD   +P*    NH LY LG CFQIFHM  S+A   H C HQR     H+H +       PS+ PTW WL  + L   GF*TI HLSI   + QL +PHL  GKA*  A  HHT SPL   H +Q *H*NH*RS AH EA  + H P F LLK+ + V QQN  E+FPPSN *C  + + G*+E K   T     ER+HVI*E  H *+STQ  H+ * *A
Subject   4772  NCDWHLVEP*TGKNPVRTSHMVLPASVWLLQPGALKILDAFEQP*GMLWNHFLYALGKCFQIFHMHYSVAHQHHLCAHQRIAELPHSHSAPPDTLLRPSYPPTWLWLTLNCLRECGF*TILHLSIPLPSLQLHSPHLDPGKA*LSAMGHHTTSPL*LPHFSQC*H*NH*RS*AHLEAGLV*HSPHF*LLKNGKEVYQQNVRENFPPSNL*CLPNPNYG*SETKQ*ATVGRQYERSHVI*EFPHF*NSTQLTHQM*E*A  5545

Range 8: 5636 to 5695 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.4 bits(60) 0.0 11/20(55%) 0/20(0%) Minus/Minus
Query      871  VWCGVETS*KLGQHPATNPY  930
                +W    TS*K  QHP  NPY
Subject   5636  IWYNAATS*K*EQHPTANPY  5695

Range 9: 4790 to 5569 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
255.4 bits(551) 0.0 139/260(53%) 0/260(0%) Plus/Plus
Query       25  VNLLG*TSSMEGFLYHMIPFTQMIAGG*QLYLVLATILI**TSPV*GWKAFCRILLGNRSITF*QQKAGKM**GTCFPVSPTSLMVSMLALGGMKG*ERRSCVVILG*RSCFSLAKMRIAKLRSLSLNAQMRNGLKPISH*VTWNQPGPGGLERWR*RNTVK*DVVMKRPNSSLMNTGVEEASN*ATHVKDLKAYTQDIKAMIQ*PFSWP*GNV*NFQSLKSKLPN*GAQSHMGSFYLTLSFQRFH*MQATMQT*CLKLC  804
                V+ LG* S M  F YHM PF     GG  L L  A I I *TS V*GWK F  ILL N    F*Q K G+M   TCF VS TS MVSM ALG M+  ERRSCVV  G*+ CFS  KMR  KL+    NAQM+NG KP   *   +QP PGG  RW *++  +  V M+  ++SLM+T V   SN*  HVKDLKA+TQ IK MI *  SW   +V*NFQS + K PN*G Q+HMGS Y  LS  RFH*M  T+    ++ C
Subject   4790  VSQLG*ISKMGEFSYHMTPFILTTDGGLLLCLASAIIWIW*TSQV*GWKVFSHILLVNLFTIF*QLKVGRMSYETCFQVSLTSSMVSMSALGKMRELERRSCVVTHG*KLCFSWVKMRTVKLKRWKRNAQMKNGSKPTFP*AI*SQPEPGGWVRWP*KSIGRCAVAMR*LSNSLMSTEVVLVSN*VMHVKDLKAFTQGIKEMIP*HSSWLFESV*NFQSPRLKQPN*GGQNHMGSSYWILSCLRFH*MPITIPICSMRQC  5569

Range 10: 5636 to 5695 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.3 bits(62) 0.0 13/20(65%) 0/20(0%) Plus/Plus
Query      871  VGIGCWMLP*FL*SLNTTPN  930
                VGIGCWML  F *S +  PN
Subject   5636  VGIGCWMLLSFS*SRSIVPN  5695

Range 11: 5094 to 5693 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
187.6 bits(403) 0.0 98/200(49%) 0/200(0%) Plus/Plus
Query      329  VW*SLAKGHAFPWPR*GLRS*GA*V*MLK*GMV*NPYPIK*LGINQGQVGWKDGVEGTP*SEMWL*NDPTVL**TQVWKKRAIEQRM*KI*KHIPKT*RQ*FSDLSHGREETSKIFKASSRSCQIEARKAIWEVST*HFPFKGSTECKPQCKPDA*SCARI*GKESKQKCSDNRKSFR*IL*GLVAGCCPNFYEVSTPHQ  928
                VW* +A+ +AFP  R*GL S*     MLK* MV NP+ +K   +NQ QVG  DG++      +WL* +  +L** Q W   A E  M*KI*KH+PK *R+*F ++ HG  + SKIFKA   S Q EA K IWEV T  FP  GST+C+ Q +   *  A + GK+S+ +CSD R+ FR ++*GL  GCC +F+EV+  +Q
Subject   5094  VW*PMAESYAFPGSR*GL*S*RDGRGMLK*RMVQNPHSLKQFRVNQSQVGG*DGLKRVSGGALWL*GNSAIL**AQRWCW*ATE*CM*KI*KHLPKA*RK*FHNIPHGCSKASKIFKAPG*SSQTEAGKTIWEVLTGFFPV*GSTKCQSQFQYVQ*GSAGVRGKKSQ*ECSDYREPFRQVM*GLAVGCCSHFHEVAALYQ  5693

Range 12: 4911 to 5063 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.5 bits(165) 0.0 32/51(63%) 0/51(0%) Plus/Plus
Query      146  EHHRFEGGKLSVAFCWETALSLFNSKKRGKCDKGLASR*AQLL*WFQC*RW  298
                +HHRFEGGK S+ FCW T+L  FNS K G+C    ASR*A LL WFQC  W
Subject   4911  KHHRFEGGKFSLTFCW*TSLPFFNS*KWGECHTRPASR*A*LLQWFQCQHW  5063

Range 13: 4773 to 4853 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.8 bits(74) 0.0 14/27(52%) 0/27(0%) Plus/Plus
Query        8  AHAYFR*IYWVELQAWRDSYIT*FLSH  88
                AH++  *+ WVE Q W +S+IT* LS+
Subject   4773  AHSHIW*VNWVEFQKWGNSHIT*LLSY  4853

Grapevine rupestris stem pitting associated virus isolate Tannat Rspav1, complete genome

Sequence ID: KR528585.1 Length: 8595 Number of Matches: 13

Range 1: 5170 to 5676 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
379.5 bits(822) 0.0 156/169(92%) 0/169(0%) Plus/Plus
Query      423  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMLEAVREFEEKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHHTK  929
                WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYE TQQFFDEHR G  EQLSNACERFESIYPRHKGNDS+TFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLD+FLSKVPLNASHN+N+  EAVREFE KKASKSAATIENH+GRSCRDWLLDVALIFMKSQH TK
Subject   5170  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKVPLNASHNSNMFHEAVREFEAKKASKSAATIENHAGRSCRDWLLDVALIFMKSQHCTK  5676

Range 2: 4756 to 5118 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
292.0 bits(631) 0.0 117/121(97%) 0/121(0%) Plus/Plus
Query        9  LTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVSVGRNEGVREEKLCGDPWLKVMLFLGQ  371
                LTLTFGESTGLNFK+GGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFF+GFNVS+G+NEGVREEKLCGDPWLKVMLFLGQ
Subject   4756  LTLTFGESTGLNFKYGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFSGFNVSIGKNEGVREEKLCGDPWLKVMLFLGQ  5118

Range 3: 5169 to 5675 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
285.6 bits(617) 0.0 129/169(76%) 0/169(0%) Minus/Minus
Query      422  LVWC*DFIKIRATSSNQSLQDLPE*FSIVAALLLAFFSSNSRTASSIRFALWLAFSGTFERKVSSRNFPYGFARLNLAAST*GFENFRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSKLLNGIWVLNH  928
                LV C DFIKIRATS++QSL DLP *FSIVAALLLAFF+SNSRTAS     L LAFSGT +RK S+RNFPYG AR +LAAST GFEN RRF TA+RKV ES PLCLG MLSNLSHALL+CS +P LCSSKNC V S*P  TSRCSF AI PTHLALVDS+LL G+WVLNH
Subject   5169  LVQCCDFIKIRATSNSQSLHDLPA*FSIVAALLLAFFASNSRTAS*NMLEL*LAFSGTLDRKESNRNFPYGLARRSLAASTWGFENLRRFRTAIRKVIESFPLCLG*MLSNLSHALLSCSPVPPLCSSKNC*VTS*PQRTSRCSFKAILPTHLALVDSRLLRGMWVLNH  5675

Range 4: 4755 to 4988 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
145.9 bits(312) 0.0 62/78(79%) 0/78(0%) Minus/Minus
Query        8  ITFSPLFAVKK**SGFPAKCDRKLSTLKPVMFTRSRLWLKRDKAVNHRRSSV*KESCDIRIPPCLKFNPVDSPKVSVS  241
                +TFSPL AVKK * G PAKC+RKLSTLKPV+FT+S+LWLKRD+AV+H RSSV*KES D+RIPP LKF+PVDSPKVSVS
Subject   4755  MTFSPLLAVKKW*RGLPAKCERKLSTLKPVIFTKSKLWLKRDRAVSHLRSSV*KESWDMRIPPYLKFSPVDSPKVSVS  4988

Range 5: 5049 to 5102 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.9 bits(83) 0.0 15/18(83%) 0/18(0%) Minus/Minus
Query      302  MTFSQGSPHSFSSLTPSF  355
                MTF+ GSPH+FSSLTPSF
Subject   5049  MTFNHGSPHNFSSLTPSF  5102

Range 6: 4756 to 5676 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
393.8 bits(853) 0.0 177/307(58%) 0/307(0%) Minus/Minus
Query        9  FGVVLRLHKN*GNIQQPIPTRSTGMIFYCRCTFACFLFLKFSHSFKHQVCIVACIQWNL*KESVK*KLPIWLCAPQFGSFDLRL*KF*TFPHGHEKGH*IIAFMSWVYAFKSFTCVAQLLASSTPVFIKELLGRFITTSHFTVFLQRHLSNPPGPG*FQVT*WDMGFKPFLI*AFRLKLLNFAILILAKEKHDL*PRITTQLLLSHPFIPPNANIETIKEVGLTGKQVPYHIFPAFCC*KVIERFPSKMRQKAFHPQTGDVH*IKIVAKTR*SCQPPAIICVKGIM*YKNPSMLEVQPSRFTESKRE  929
                F  VLRLHKN  NI QPIP   T MI Y  CT    L LK  H F   V I+  I W+  ++ V *+LPIWL  P FGSF+L L KF T    H++G+*II+FM WV AFK  TC+AQLL SST + IKELL  FITT+H  +  Q H ++PPGPG* Q+T  D+GFKPF I*AF L L NF ILIL +EKHD *P +TTQLLL + FI  NAN++  +EV LT +QV Y I P F C +V++ F SK+ +K FHPQ  D+H*I+IVAK R*S +PP IICVKGIM Y+NP +LE+QP RFTE KRE
Subject   4756  FSAVLRLHKNQSNI*QPIPA*PTCMILYSCCTLTSLLRLKLPHCFMKHVGIMTSI*WDFRQKGV**ELPIWLGPP*FGSFNLGLRKFETLSDSHKEGY*IISFMPWVNAFKPLTCIAQLLTSSTSMLIKELLSHFITTTHLPMLFQGHFTHPPGPG*LQITQGDVGFKPFFI*AF*LHLFNFTILILTQEKHDF*PWVTTQLLLPNTFILSNANVKATEEVRLTWEQVSYDILPTFGCQEVVKGFASKV*EKTFHPQARDIH*IQIVAKAR*SSEPPPIICVKGIMGYENPPILEIQPCRFTEGKRE  5676

Range 7: 4757 to 5560 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
287.0 bits(620) 0.0 153/268(57%) 0/268(0%) Plus/Plus
Query       10  SRLLSVNLLG*TSSMEGFLYHMIPFTQMIAGG*QLYLVLATILI**TSPV*GWKAFCRILLGNRSITF*QQKAGKM**GTCFPVSPTSLMVSMLALGGMKG*ERRSCVVILG*RSCFSLAKMRIAKLRSLSLNAQMRNGLKPISH*VTWNQPGPGGLERWR*RNTVK*DVVMKRPNSSLMNTGVEEASN*ATHVKDLKAYTQDIKAMIQ*PFSWP*GNV*NFQSLKSKLPN*GAQSHMGSFYLTLSFQRFH*MQATMQT*CLKLCENL  813
                SRL SVNL G* SSM GF Y MIPFTQMI GG  LYL LATI I** S  *GWK F   LL N   T *Q K G+M   TC  VS TS +   LAL  MK   RRSCVV  G*+SCFS  KMRI KL+  S NAQM+NGLKP S *V W+QPGPGG  +W *++  +  VVMK  N+SLM+  VE  SN*A HV+ LKA+TQ IK MIQ*P  W   +V NF+S + KLPN G  SHMGS Y T    + H*M   + T  +K C +L
Subject   4757  SRLPSVNLQG*ISSMGGFSYPMIPFTQMIGGGSLLYLALATIWI**ISRA*GWKVFSHTLLANPFTTS*QPKVGRMSYETCSQVSLTSSVALTLALERMKVLGRRSCVVTHG*KSCFSWVKMRIVKLKRWSQNAQMKNGLKPTSP*VIWSQPGPGGWVKWP*KSIGRCVVVMK*LNNSLMSIEVELVSN*AMHVRGLKAFTQGIKEMIQ*PSLWLSESVSNFRSPRLKLPNYGGPSHMGSSY*TPFCLKSH*MLVIIPTCFMKQCGSL  5560

Range 8: 5538 to 5672 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.6 bits(102) 0.0 22/45(49%) 0/45(0%) Plus/Plus
Query      791  A*SCARI*GKESKQKCSDNRKSFR*IL*GLVAGCCPNFYEVSTPH  925
                +*S A +*G+E   +CS+ R+S R*++ GL   CC +FYEV+T H
Subject   5538  S*SSAGV*GEEG**ECSNYRESCR*VMQGLAVRCCSDFYEVATLH  5672

Range 9: 4757 to 5482 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
281.9 bits(609) 0.0 136/242(56%) 0/242(0%) Minus/Minus
Query       10  VETSHMALRASIWQLRLEALKILDVSSRP*ERSLNHCLYVLGICFQIFHMRCSIARFFHTCVHQRTVGSFHNHISLHGVPSTPSFQPTWPWLIPSYLMGYGF*TIPHLSIQTQAPQLRNPHLGQGKA*PLAKDHHTASPLSPLHSAQR*H*NH*RSWAHREASPLSHFPRFLLLKSDRAVSQQNATESFPPSNR*CSLDQDCG*NEIKLSTTGDHLCERNHVI*ESLHA*SSTQ*IHRK*A*  735
                + TSHMA  A +WQL+  A KI D   +P* R LNH LY LG CFQ  HM CS+A  FH   HQR V S HNH +     S P + PTWPWL P Y  G GF*TI HLSI T + QL NPHL  GKA* L   HHT SP   LHS Q * *+H*RS AH  AS + H P F L +S + V QQ+  E+FPPS+ * SL+ +CG*+EI+   T DHLCERNH I*ES H *+S  *IHR+*A*
Subject   4757  IGTSHMAWPAVVWQLQPGASKI*DAFGQP*GRLLNHFLYALGKCFQTSHMHCSVAHQFHLYAHQRIVESLHNHNAPPDALSRPFYPPTWPWLTPDYSGGCGF*TILHLSILTPSLQLHNPHLDPGKA*LLTMGHHTTSPP*HLHSFQC*R*SH*RS*AHLGASLV*HSPHFWLSRSGKGVCQQSVRENFPPSSP*YSLNPNCG*SEIEQ*ATSDHLCERNHGI*ESPHT*NSAL*IHRR*A*  5482

Range 10: 5600 to 5671 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
27.6 bits(54) 0.0 12/24(50%) 0/24(0%) Minus/Minus
Query      853  CGVETS*KLGQHPATNPYKIYRND  924
                C V TS*K  QH   NP   Y +D
Subject   5600  CSVATS*KSEQHLTANPCMTYLHD  5671

Range 11: 5076 to 5477 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
142.2 bits(304) 0.0 73/134(54%) 0/134(0%) Plus/Plus
Query      329  VW*SLAKGHAFPWPR*GLRS*GA*V*MLK*GMV*NPYPIK*LGINQGQVGWKDGVEGTP*SEMWL*NDPTVL**TQVWKKRAIEQRM*KI*KHIPKT*RQ*FSDLSHGREETSKIFKASSRSCQIEARKAIWEV  730
                VW* + K HAFP  R*GL S*   V MLK* MV*NP+P +* G+NQGQVG  +G+E      +WL*+D T+L**   W   A EQ M*++*KH+PK *R+*F++L +G  + S+IF+A   SCQ  A +AIWEV
Subject   5076  VW*PMVKSHAFPGSR*GL*S*RDGVRMLK*RMV*NPHPPE*SGVNQGQVGG*NGLERASGGALWL*SDSTIL**A*RWNW*ATEQCM*EV*KHLPKA*RK*FNNLPYGCPKASQIFEAPG*SCQTTAGQAIWEV  5477

Range 12: 4893 to 5045 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
60.6 bits(126) 0.0 26/51(51%) 0/51(0%) Plus/Plus
Query      146  EHHRFEGGKLSVAFCWETALSLFNSKKRGKCDKGLASR*AQLL*WFQC*RW  298
                E+H  EGGK S+  CW+T L L +S+K G+C   LA R*A LL W   * W
Subject   4893  EYHGLEGGKFSLTLCWQTPLPLLDSQKWGECHTRLAPR*A*LLQWL*R*HW  5045

Range 13: 4758 to 4850 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.1 bits(103) 0.0 22/31(71%) 0/31(0%) Plus/Plus
Query       11  HAYFR*IYWVELQAWRDSYIT*FLSHR*SPV  103
                HAY R*IY  E Q W DS+I *FLSHR*S V
Subject   4758  HAYLR*IYRAEFQVWGDSHIP*FLSHR*SEV  4850

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 11

Range 1: 4774 to 5685 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
693.4 bits(1507) 0.0 291/304(96%) 0/304(0%) Minus/Minus
Query        9  VLRLHKN*GNIQQPIPTRSTGMIFYCRCTFACFLFLKFSHSFKHQVCIVACIQWNL*KESVK*KLPIWLCAPQFGSFDLRL*KF*TFPHGHEKGH*IIAFMSWVYAFKSFTCVAQLLASSTPVFIKELLGRFITTSHFTVFLQRHLSNPPGPG*FQVT*WDMGFKPFLI*AFRLKLLNFAILILAKEKHDL*PRITTQLLLSHPFIPPNANIETIKEVGLTGKQVPYHIFPAFCC*KVIERFPSKMRQKAFHPQTGDVH*IKIVAKTR*SCQPPAIICVKGIM*YKNPSMLEVQPSRFTESKRE  920
                VLRLHKN*GNIQQPIPTRST MIFYCRCTFACFLFLKFSHSFKHQVCIVACIQWNL*KESVK*KLPIWLCAP F SFDLRL*KF TFP+ HEKGH*II FMSW+YAFKSFTC+AQLLASSTPVFIKELLGRFITTSHFTVFLQRHLSNPPGPG FQVT*WDMGFKPFLI* FRLKLLNFAILILAKEKHDL*PRITTQLLLSHPFIPPNANIETIKEVGLTGKQVPYHI PAFCC*KVIERFPSKMRQKAFHPQTG+VH*IKIVAKTR*SCQPPAIICVKGIM*YKNPSMLEVQPSRFTESKRE
Subject   4774  VLRLHKN*GNIQQPIPTRSTRMIFYCRCTFACFLFLKFSHSFKHQVCIVACIQWNL*KESVK*KLPIWLCAP*FCSFDLRL*KFKTFPNSHEKGH*IITFMSWIYAFKSFTCIAQLLASSTPVFIKELLGRFITTSHFTVFLQRHLSNPPGPGRFQVT*WDMGFKPFLI*TFRLKLLNFAILILAKEKHDL*PRITTQLLLSHPFIPPNANIETIKEVGLTGKQVPYHILPAFCC*KVIERFPSKMRQKAFHPQTGNVH*IKIVAKTR*SCQPPAIICVKGIM*YKNPSMLEVQPSRFTESKRE  5685

Range 2: 5188 to 5694 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
406.1 bits(880) 0.0 168/169(99%) 0/169(0%) Plus/Plus
Query      423  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMLEAVREFEEKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHHTK  929
                WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMLEAVREFEEKKASKSAATIENHSGRSCRDWLLDVALIFMKSQH TK
Subject   5188  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMLEAVREFEEKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTK  5694

Range 3: 4774 to 5136 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
298.4 bits(645) 0.0 120/121(99%) 0/121(0%) Plus/Plus
Query        9  LTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVSVGRNEGVREEKLCGDPWLKVMLFLGQ  371
                LTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVS+GRNEGVREEKLCGDPWLKVMLFLGQ
Subject   4774  LTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQ  5136

Range 4: 4775 to 5689 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
653.6 bits(1420) 0.0 290/305(95%) 0/305(0%) Minus/Minus
Query       10  CGVETS*KLGQHPATNPYKIYRNDXXXXXXXXXXXFPQILAQLQASGLHCGLHSVEPLKGKCQVETSHMALRASIWQLRLEALKILDVSSRP*ERSLNHCLYVLGICFQIFHMRCSIARFFHTCVHQRTVGSFHNHISLHGVPSTPSFQPTWPWLIPSYLMGYGF*TIPHLSIQTQAPQLRNPHLGQGKA*PLAKDHHTASPLSPLHSAQR*H*NH*RSWAHREASPLSHFPRFLLLKSDRAVSQQNATESFPPSNR*CSLDQDCG*NEIKLSTTGDHLCERNHVI*ESLHA*SSTQ*IHRK*A*  924
                C VETS*KLGQHPATNPYKIY+NDFLLSLHFCLLSFPQILAQLQASGLHCGLHSVEPLKGKCQV+TSHMALRA I QLRLEALKI DVS +P*ERSLNH LYVL ICFQIFHM CSIARFFHTCVHQRTVGSFHNHISLHGVPSTPSFQPTWPW IPSYLMGYGF*TIPHL+IQTQAPQLRNPHLGQGKA*PLAKDHHTASPLSPLHSAQ *H*NH*RSWAHREASPLSH PRFLLLKSDRAVSQQNATESFPPSNR*CSLDQDCG*NEIKLSTTGDHLCERNHVI*ESLHA*SSTQ*IHRK*A*
Subject   4775  CSVETS*KLGQHPATNPYKIYQNDFLLSLHFCLLSFPQILAQLQASGLHCGLHSVEPLKGKCQVKTSHMALRALILQLRLEALKI*DVS*QP*ERSLNHYLYVLDICFQIFHMHCSIARFFHTCVHQRTVGSFHNHISLHGVPSTPSFQPTWPWSIPSYLMGYGF*TIPHLNIQTQAPQLRNPHLGQGKA*PLAKDHHTASPLSPLHSAQC*H*NH*RSWAHREASPLSHSPRFLLLKSDRAVSQQNATESFPPSNR*CSLDQDCG*NEIKLSTTGDHLCERNHVI*ESLHA*SSTQ*IHRK*A*  5689

Range 5: 4775 to 5578 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
573.8 bits(1246) 0.0 257/268(96%) 0/268(0%) Plus/Plus
Query       10  SRLLSVNLLG*TSSMEGFLYHMIPFTQMIAGG*QLYLVLATILI**TSPV*GWKAFCRILLGNRSITF*QQKAGKM**GTCFPVSPTSLMVSMLALGGMKG*ERRSCVVILG*RSCFSLAKMRIAKLRSLSLNAQMRNGLKPISH*VTWNQPGPGGLERWR*RNTVK*DVVMKRPNSSLMNTGVEEASN*ATHVKDLKAYTQDIKAMIQ*PFSWP*GNV*NFQSLKSKLPN*GAQSHMGSFYLTLSFQRFH*MQATMQT*CLKLCENL  813
                SRLLSVNLLG*TSSMEGFLYHMIPFTQMIAGG*QLYLVLATILI**T PV*GWKAFCRILLGNRSITF*QQKAG+M**GTCFPVSPTSLMVSMLALGGMKG*ERRSCVVILG*RSCFSLAKMRIAKLRSLSLN QMRNGLKPISH*VTWN+PGPGGLERWR*RNTVK*DVVMKRPNSSLMNTGVEEASN*A HVKDLKAY QDIK MIQ*PFSW  GNV NFQSLKSKL N*GAQSHMGSFYLTLSFQRFH*MQATMQT*CLKLCENL
Subject   4775  SRLLSVNLLG*TSSMEGFLYHMIPFTQMIAGG*QLYLVLATILI**TLPV*GWKAFCRILLGNRSITF*QQKAGRM**GTCFPVSPTSLMVSMLALGGMKG*ERRSCVVILG*RSCFSLAKMRIAKLRSLSLNVQMRNGLKPISH*VTWNRPGPGGLERWR*RNTVK*DVVMKRPNSSLMNTGVEEASN*AMHVKDLKAYIQDIKVMIQ*PFSWLLGNVLNFQSLKSKLQN*GAQSHMGSFYLTLSFQRFH*MQATMQT*CLKLCENL  5578

Range 6: 5618 to 5686 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.5 bits(106) 0.0 22/23(96%) 0/23(0%) Plus/Plus
Query      853  IIPVDLVGIGCWMLP*FL*SLNT  921
                II VDLVGIGCWMLP*FL*SLNT
Subject   5618  IILVDLVGIGCWMLP*FL*SLNT  5686

Range 7: 4911 to 5693 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
529.4 bits(1149) 0.0 244/261(93%) 0/261(0%) Plus/Plus
Query      146  EHHRFEGGKLSVAFCWETALSLFNSKKRGKCDKGLASR*AQLL*WFQC*RWXXXXXXXXXXVW*SLAKGHAFPWPR*GLRS*GA*V*MLK*GMV*NPYPIK*LGINQGQVGWKDGVEGTP*SEMWL*NDPTVL**TQVWKKRAIEQRM*KI*KHIPKT*RQ*FSDLSHGREETSKIFKASSRSCQIEARKAIWEVST*HFPFKGSTECKPQCKPDA*SCARI*GKESKQKCSDNRKSFR*IL*GLVAGCCPNFYEVSTPHQ  928
                EH+RFEGGKLSVAFCWETALSLFNSKKRG+CDKGLASR*AQLL*WFQC* WAE*RGERGEAVW*SLAKGHAFPWPR*GLRS*GA*V*M K*GMV*NPYPIK*LGI+QGQVGWKDGVEGTP*SEMWL*NDPTVL**TQVWKKRAIEQ M*KI*KHI KT*R *FSDLSHG  ETS IFKASSRSC+I+ARKAIWEV T*HFPFKGSTECKPQCKPDA*SCARI*GKESKQKCSDNRKSF *IL*GLVAGCCPNFYEVST H+
Subject   4911  EHYRFEGGKLSVAFCWETALSLFNSKKRGECDKGLASR*AQLL*WFQC*HWAE*RGERGEAVW*SLAKGHAFPWPR*GLRS*GA*V*MFK*GMV*NPYPIK*LGIDQGQVGWKDGVEGTP*SEMWL*NDPTVL**TQVWKKRAIEQCM*KI*KHISKT*R**FSDLSHGC*ETS*IFKASSRSCKIKARKAIWEVFT*HFPFKGSTECKPQCKPDA*SCARI*GKESKQKCSDNRKSFW*IL*GLVAGCCPNFYEVSTLHK  5693

Range 8: 4776 to 4874 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
81.3 bits(171) 0.0 33/33(100%) 0/33(0%) Plus/Plus
Query       11  HAYFR*IYWVELQAWRDSYIT*FLSHR*SPVVD  109
                HAYFR*IYWVELQAWRDSYIT*FLSHR*SPVVD
Subject   4776  HAYFR*IYWVELQAWRDSYIT*FLSHR*SPVVD  4874

Range 9: 5187 to 5690 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
384.6 bits(833) 0.0 164/168(98%) 0/168(0%) Minus/Minus
Query      422  VWC*DFIKIRATSSNQSLQDLPE*FSIVAALLLAFFSSNSRTASSIRFALWLAFSGTFERKVSSRNFPYGFARLNLAAST*GFENFRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSKLLNGIWVLNH  925
                V C*DFIKIRATSSNQSLQDLPE*FSIVAALLLAFFSSNSRTASSIRFALWLAFSGTFERKVSS+NFPYGFARLN AAST*GFEN RRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSKLLNGIWVLNH
Subject   5187  VQC*DFIKIRATSSNQSLQDLPE*FSIVAALLLAFFSSNSRTASSIRFALWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFENLRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSKLLNGIWVLNH  5690

Range 10: 4773 to 5006 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
184.4 bits(396) 0.0 78/78(100%) 0/78(0%) Minus/Minus
Query        8  ITFSPLFAVKK**SGFPAKCDRKLSTLKPVMFTRSRLWLKRDKAVNHRRSSV*KESCDIRIPPCLKFNPVDSPKVSVS  241
                ITFSPLFAVKK**SGFPAKCDRKLSTLKPVMFTRSRLWLKRDKAVNHRRSSV*KESCDIRIPPCLKFNPVDSPKVSVS
Subject   4773  ITFSPLFAVKK**SGFPAKCDRKLSTLKPVMFTRSRLWLKRDKAVNHRRSSV*KESCDIRIPPCLKFNPVDSPKVSVS  5006

Range 11: 5064 to 5120 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.3 bits(99) 0.0 19/19(100%) 0/19(0%) Minus/Minus
Query      299  MTFSQGSPHSFSSLTPSFR  355
                MTFSQGSPHSFSSLTPSFR
Subject   5064  MTFSQGSPHSFSSLTPSFR  5120

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 11

Range 1: 5188 to 5694 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
398.3 bits(863) 0.0 165/169(98%) 0/169(0%) Plus/Plus
Query      423  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMLEAVREFEEKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHHTK  929
                WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSE+LSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLM EAVREFE KKASKSAATIENHSGRSCRDWLLDVALIFMKSQH TK
Subject   5188  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEKLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMHEAVREFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTK  5694

Range 2: 4774 to 5136 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
295.7 bits(639) 0.0 119/121(98%) 0/121(0%) Plus/Plus
Query        9  LTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVSVGRNEGVREEKLCGDPWLKVMLFLGQ  371
                LTLTFGESTGLNFK+GGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVS+GRNEGVREEKLCGDPWLKVMLFLGQ
Subject   4774  LTLTFGESTGLNFKYGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQ  5136

Range 3: 4774 to 5685 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
606.4 bits(1317) 0.0 250/304(82%) 0/304(0%) Minus/Minus
Query        9  VLRLHKN*GNIQQPIPTRSTGMIFYCRCTFACFLFLKFSHSFKHQVCIVACIQWNL*KESVK*KLPIWLCAPQFGSFDLRL*KF*TFPHGHEKGH*IIAFMSWVYAFKSFTCVAQLLASSTPVFIKELLGRFITTSHFTVFLQRHLSNPPGPG*FQVT*WDMGFKPFLI*AFRLKLLNFAILILAKEKHDL*PRITTQLLLSHPFIPPNANIETIKEVGLTGKQVPYHIFPAFCC*KVIERFPSKMRQKAFHPQTGDVH*IKIVAKTR*SCQPPAIICVKGIM*YKNPSMLEVQPSRFTESKRE  920
                +LRLH+N  +IQQPIP RST MIFYCRCTFACFL LKFSHSF HQVCIVACIQW+L KESVK*K PIWLCAPQF SF+LRL +F TFP  HE+GH*II FMSW+YAFKSFTC+AQ LASSTP+FIKELLGRFITTSHFTVFLQ HLSNPPGP *FQ+T*WDMGFKPFLI AFRLK LN AILILA EKHDL*PRITT+L LSH FIPPNAN+E IKEVGLTGKQ+PYHI P F C*KVI+RFPSKMRQKAFHPQT +++*IKIVAKTR* CQPP IICVKG+M Y+NPS+LE+QPSRFTE KRE
Subject   4774  MLRLHENESDIQQPIPARSTRMIFYCRCTFACFLCLKFSHSFMHQVCIVACIQWDLRKESVK*KFPIWLCAPQFCSFNLRLREFKTFPDSHEEGH*IITFMSWIYAFKSFTCIAQFLASSTPMFIKELLGRFITTSHFTVFLQCHLSNPPGPC*FQIT*WDMGFKPFLIRAFRLKFLNLAILILA*EKHDL*PRITTKLFLSHSFIPPNANVEAIKEVGLTGKQIPYHILPTFRC*KVIKRFPSKMRQKAFHPQTSNIY*IKIVAKTR*GCQPPTIICVKGVMGYENPSILEIQPSRFTEGKRE  5685

Range 4: 4775 to 5689 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
539.5 bits(1171) 0.0 247/305(81%) 0/305(0%) Minus/Minus
Query       10  CGVETS*KLGQHPATNPYKIYRNDXXXXXXXXXXXFPQILAQLQASGLHCGLHSVEPLKGKCQVETSHMALRASIWQLRLEALKILDVSSRP*ERSLNHCLYVLGICFQIFHMRCSIARFFHTCVHQRTVGSFHNHISLHGVPSTPSFQPTWPWLIPSYLMGYGF*TIPHLSIQTQAPQLRNPHLGQGKA*PLAKDHHTASPLSPLHSAQR*H*NH*RSWAHREASPLSHFPRFLLLKSDRAVSQQNATESFPPSNR*CSLDQDCG*NEIKLSTTGDHLCERNHVI*ESLHA*SSTQ*IHRK*A*  924
                C VETS*K  +HPA NP KIY+NDFLLSLHFCLLS PQILAQL ASGLHCGLHSV P KGKCQV+ SHMALRASI QL+LEA +I DVS +P* RSLNH LYVL ICFQIFHM CSI+RFFHT VHQRTVGSFHNHISLHGVPS PSFQPTWP LIP YLMGYGF*TIPH SIQTQ PQ RNPHLG  KA*PLAKDHH A PL+ LHSAQ * *+H*RSWAHREA+PLSH P F LL+SD+AVSQQNATESFPPSN+*  LDQDCG*NEI+LSTT DHLCER+H I*ESLH *+S Q*IHR+*A*
Subject   4775  CNVETS*K*ERHPAANPCKIYQNDFLLSLHFCLLSLPQILAQLHASGLHCGLHSVGPSKGKCQVKISHMALRASILQLQLEASRI*DVS*QP*GRSLNHYLYVLDICFQIFHMHCSISRFFHTYVHQRTVGSFHNHISLHGVPSMPSFQPTWPLLIPDYLMGYGF*TIPHSSIQTQVPQPRNPHLGLRKA*PLAKDHHKAFPLALLHSAQC*R*SH*RSWAHREANPLSHSPHFSLLESDKAVSQQNATESFPPSNQ*YLLDQDCG*NEIRLSTTDDHLCERSHGI*ESLHT*NSAQ*IHRR*A*  5689

Range 5: 5187 to 5690 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
369.5 bits(800) 0.0 157/168(93%) 0/168(0%) Minus/Minus
Query      422  VWC*DFIKIRATSSNQSLQDLPE*FSIVAALLLAFFSSNSRTASSIRFALWLAFSGTFERKVSSRNFPYGFARLNLAAST*GFENFRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSKLLNGIWVLNH  925
                V C*DF+K+RATSS+QSLQDLPE*FSIVAALLLAFF+SNSRTAS IRFALWLAFSGTFERKVSS+NFPYGFARLN AAST*GFEN RRFLTAMRKVTESLPLCLGYMLSNLSHALLN SLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDS+LLNGIWVLNH
Subject   5187  VQC*DFMKMRATSSSQSLQDLPE*FSIVAALLLAFFASNSRTASCIRFALWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFENLRRFLTAMRKVTESLPLCLGYMLSNLSHALLNFSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSRLLNGIWVLNH  5690

Range 6: 4773 to 5006 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
167.4 bits(359) 0.0 72/78(92%) 0/78(0%) Minus/Minus
Query        8  ITFSPLFAVKK**SGFPAKCDRKLSTLKPVMFTRSRLWLKRDKAVNHRRSSV*KESCDIRIPPCLKFNPVDSPKVSVS  241
                ITFSPLFAV+K**SGFPAKCDRKLSTLKPV+FTRSRLWLKRDKAVNHRRSSV*KES D+RIPP LKF+PVDSPKVSVS
Subject   4773  ITFSPLFAVRK**SGFPAKCDRKLSTLKPVIFTRSRLWLKRDKAVNHRRSSV*KESWDMRIPPYLKFSPVDSPKVSVS  5006

Range 7: 5064 to 5120 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.8 bits(85) 0.0 17/19(89%) 0/19(0%) Minus/Minus
Query      299  MTFSQGSPHSFSSLTPSFR  355
                MTFSQGSP SFSS TPSFR
Subject   5064  MTFSQGSPQSFSSRTPSFR  5120

Range 8: 4775 to 5578 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
481.7 bits(1045) 0.0 223/268(83%) 0/268(0%) Plus/Plus
Query       10  SRLLSVNLLG*TSSMEGFLYHMIPFTQMIAGG*QLYLVLATILI**TSPV*GWKAFCRILLGNRSITF*QQKAGKM**GTCFPVSPTSLMVSMLALGGMKG*ERRSCVVILG*RSCFSLAKMRIAKLRSLSLNAQMRNGLKPISH*VTWNQPGPGGLERWR*RNTVK*DVVMKRPNSSLMNTGVEEASN*ATHVKDLKAYTQDIKAMIQ*PFSWP*GNV*NFQSLKSKLPN*GAQSHMGSFYLTLSFQRFH*MQATMQT*CLKLCENL  813
                SRL SVNLLG* SSMEGF Y M PFTQMI GG*Q YLVLATILI**   V*GWKAFCRILLGNR ITF*Q+K G+M**G CFPVSPTSLM S LALGGMK  ER+S VVILG*RSCFS AKMRIA+LR+LSLNA+MRNGLKPISH*V WNQ GPGGLERW *RNTVK*DVVMKRPNSSLMN GVEEA N*A HVKDLKAY QDIK MIQ*P SW  GNV N +SLK KL N*GAQSHMG+FYLTLSF+R H*MQATMQT*C+KLCENL
Subject   4775  SRLPSVNLLG*ISSMEGFSYPMTPFTQMIVGG*QPYLVLATILI**ILLV*GWKAFCRILLGNRFITF*QRKVGRM**GICFPVSPTSLMASTLALGGMKECERKSFVVILG*RSCFS*AKMRIARLRNLSLNARMRNGLKPISH*VIWNQQGPGGLERWH*RNTVK*DVVMKRPNSSLMNIGVEEARN*AMHVKDLKAYIQDIKVMIQ*PSSWLSGNVLNSRSLKLKLQN*GAQSHMGNFYLTLSFRRSH*MQATMQT*CMKLCENL  5578

Range 9: 5618 to 5683 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.0 bits(70) 0.0 16/22(73%) 0/22(0%) Plus/Plus
Query      853  IIPVDLVGIGCWMLP*FL*SLN  918
                II VDL GIGCWM   F *SLN
Subject   5618  IILVDLAGIGCWMSLSFS*SLN  5683

Range 10: 4911 to 5693 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
447.8 bits(971) 0.0 211/261(81%) 0/261(0%) Plus/Plus
Query      146  EHHRFEGGKLSVAFCWETALSLFNSKKRGKCDKGLASR*AQLL*WFQC*RWXXXXXXXXXXVW*SLAKGHAFPWPR*GLRS*GA*V*MLK*GMV*NPYPIK*LGINQGQVGWKDGVEGTP*SEMWL*NDPTVL**TQVWKKRAIEQRM*KI*KHIPKT*RQ*FSDLSHGREETSKIFKASSRSCQIEARKAIWEVST*HFPFKGSTECKPQCKPDA*SCARI*GKESKQKCSDNRKSFR*IL*GLVAGCCPNFYEVSTPHQ  928
                +++ FEGGKLSVAFCWETALSL NS+K G+CDKG ASR*AQLL*W Q * WAE*R  RG+A+W*SLAKGHAF  PR*GLR *G *V*ML+*GMV*NPYPIK* GIN+GQVGWKDG+EGTP*SEMWL*NDPTVL**T VWKKR IEQ M*KI*KHI KT*R *FSDL HG +ETS I +ASS SC+IEARKAIWE+ T*HFPF+G TECKPQCKPDA*SCARI*GKESKQKCSDNRKSF *IL GL AGC  +F+EVST H+
Subject   4911  KYYWFEGGKLSVAFCWETALSLSNSEKWGECDKGFASR*AQLL*WLQR*HWAE*RSARGKALW*SLAKGHAFLRPR*GLRG*GT*V*MLE*GMV*NPYPIK*SGINKGQVGWKDGIEGTP*SEMWL*NDPTVL**T*VWKKREIEQCM*KI*KHISKT*R**FSDLPHGCQETS*ILEASS*SCKIEARKAIWEIFT*HFPFEGPTECKPQCKPDA*SCARI*GKESKQKCSDNRKSFW*ILQGLAAGCRSHFHEVSTLHK  5693

Range 11: 4776 to 4874 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.6 bits(128) 0.0 25/33(76%) 0/33(0%) Plus/Plus
Query       11  HAYFR*IYWVELQAWRDSYIT*FLSHR*SPVVD  109
                HAY R*IYW E Q WRDS+I * LSHR*S VVD
Subject   4776  HAYLR*IYWAEFQVWRDSHIP*LLSHR*SSVVD  4874

Nucleotide Sequence (413 letters)

Query ID:ds2016-132_4
Query definition:No definition line
Query length:951
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 16 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
42
84
126
168
210
252
294
336
378
413

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus complete genome, genomic RNA, isolate GRSPaV MG

Sequence ID: FR691076.1 Length: 8749 Number of Matches: 8

Range 1: 1744 to 2124 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
268.7 bits(584) 0.0 119/127(94%) 0/127(0%) Plus/Plus
Query       18  YKVGLFKHIKALTYCFNSCGLQWFLLRRRSNLKFLKDGASSFANLSCEVIKAYKSVVLQATLPEALLSLTKVFIRDSDLNDVFTSELISNDESVGLVCSAGSTSEKSQSVNCEASRVPVSSSSTQLP  398
                YKVGLFKHIK LTY FNSCGLQ FLL+R SNLKFLKDGASSFANLSCEVIKAYKSVV QATLPEALLSLTKVFIRDSDLND FTSELISNDESVGLVCSAGSTSEKSQ VNCEASRVPVSSSSTQLP
Subject   1744  YKVGLFKHIKPLTYWFNSCGLQCFLLKRGSNLKFLKDGASSFANLSCEVIKAYKSVVSQATLPEALLSLTKVFIRDSDLNDAFTSELISNDESVGLVCSAGSTSEKSQPVNCEASRVPVSSSSTQLP  2124

Range 2: 1728 to 2123 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
251.7 bits(543) 0.0 121/132(92%) 0/132(0%) Minus/Minus
Query        2  GSWVLEELTGTLLASQLTDCDFSEVEPAEQTSPTDSSFEINSEVKTSFRSESLMKTLVRLSRASGRVACNTTDL*ALITSQLRLAKDDAPSFXXXXXXXXXXXNHWRPQELKQ*VRAFMCLKRPTL*EFWTS  397
                GSWVLEELTGTLLASQLT CDFSEVEPAEQTSPTDSSFEINSEVK SFRSESLMKTLVRLSRASG VAC+TTDL*ALITSQLRLAKDDAPSFRNLRLD RLRR HWRPQEL Q*VR FMCLKRPTL*+ W S
Subject   1728  GSWVLEELTGTLLASQLTGCDFSEVEPAEQTSPTDSSFEINSEVKASFRSESLMKTLVRLSRASGSVACDTTDL*ALITSQLRLAKDDAPSFRNLRLDPRLRRKHWRPQELNQ*VRGFMCLKRPTL*KIWAS  2123

Range 3: 1729 to 2127 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
250.3 bits(540) 0.0 116/133(87%) 0/133(0%) Minus/Minus
Query        3  TRQLGA*RAHWNSASLTID*L*FLRG*TC*TNQSD*LII*D*FRGENII*IRISYENFS*A*QSFREGCL*HNRLVGLDNLTTKISKGRCSIFQKLEVGPSPKKEPLETTRIETISEGFYVLKKTHFVRILDL  401
                +R LGA*RAHWN ASLTID L*FLRG*TC*TNQSD*LII*+*FRGE+II*IR+SYENFS*A*QSFRE CL*+NRLVGLDNLTTKISKGRCSIFQKLEVGPS K+E LETTRIE ISEGFYVLKKTHFV+ + L
Subject   1729  SR*LGA*RAHWNPASLTIDWL*FLRG*TC*TNQSD*LII*N*FRGESII*IRVSYENFS*A*QSFRECCL*YNRLVGLDNLTTKISKGRCSIFQKLEVGPSLKEEALETTRIEPISEGFYVLKKTHFVKNMGL  2127

Range 4: 1727 to 2128 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
242.5 bits(523) 0.0 116/134(87%) 0/134(0%) Plus/Plus
Query        1  VRSKILTKWVFLST*KPSLIVSILVVSNGSFLGEGPTSSF*KMEHRPLLILVVRLSRPTSLLCYRQPSLKLC*A*LKFS*EILI*MMFSPLN*SQMMSQSDWFVQQVQPLRNHSQSIVRLAEFQ*ALQAPSCLV  402
                VR    TKWVFLST* PSLI SILVVSN S L EGPTSSF*KMEHRPLLILVVRLSRPTSLL +RQ SLKLC*A*LKFS*E LI*MM SPLN* QMMSQSDWFVQQVQPLRNHSQSIVRLA FQ*ALQAPS L+
Subject   1727  VRPIFFTKWVFLST*NPSLIGSILVVSNASSLSEGPTSSF*KMEHRPLLILVVRLSRPTSLLYHRQHSLKLC*A*LKFS*ETLI*MMLSPLN*FQMMSQSDWFVQQVQPLRNHSQSIVRLAGFQ*ALQAPSYLL  2128

Range 5: 1727 to 1921 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
137.2 bits(293) 0.0 57/65(88%) 0/65(0%) Minus/Minus
Query        1  PVTQQTCRP**PHN*D*QRTMLHLSET*GWTFA*EGTIGDHKN*NNK*GLLCA*KDPLCKNFGPH  195
                PV QQTCRP**PHN*D*QRTMLHLSET*GWT A* G+IGDHKN* NK*G+LCA*KDPLCK +GPH
Subject   1727  PVIQQTCRP**PHN*D*QRTMLHLSET*GWTLA*GGSIGDHKN*TNK*GVLCA*KDPLCKKYGPH  1921

Range 6: 1970 to 2125 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
111.5 bits(237) 0.0 47/52(90%) 0/52(0%) Minus/Minus
Query      244  QAAGCLKSSLELC*PHN*LTVISQRLNLLNKPVRLTHHLRLIQR*KHHLDQN  399
                Q AGCLKSSLE C*PHN*L VISQRLNLLNKPVRLTHHL+LIQR*KHHLDQ+
Subject   1970  QVAGCLKSSLEPC*PHN*LAVISQRLNLLNKPVRLTHHLKLIQR*KHHLDQS  2125

Range 7: 1728 to 1922 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
139.9 bits(299) 0.0 58/65(89%) 0/65(0%) Plus/Plus
Query        2  *GPKFLQSGSF*AHKSPHLLFQFLWSPMVPS*AKVQPQVSERWSIVLC*S*L*GYQGLQVCCVTG  196
                *GP FLQSGSF*AHK+PHLL QFLWSPM+P *A+VQPQVSERWSIVLC*S*L*GYQGLQVCC+TG
Subject   1728  *GPYFLQSGSF*AHKTPHLLVQFLWSPMLPP*ARVQPQVSERWSIVLC*S*L*GYQGLQVCCITG  1922

Range 8: 1959 to 2066 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.5 bits(154) 0.0 34/36(94%) 0/36(0%) Plus/Plus
Query      233  FHKRF*SK*CFHL*INLK**VSRTGLFSRFNL*EIT  340
                FHKR *SK*CFHL*IN K**VSRTGLFSRFNL*EIT
Subject   1959  FHKRL*SK*CFHL*INFK**VSRTGLFSRFNL*EIT  2066

Rupestris stem pitting associated virus strain SG1, complete genome

Sequence ID: AY881626.1 Length: 8742 Number of Matches: 8

Range 1: 1729 to 2124 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
260.5 bits(566) 0.0 115/132(87%) 0/132(0%) Plus/Plus
Query        3  EVQNSYKVGLFKHIKALTYCFNSCGLQWFLLRRRSNLKFLKDGASSFANLSCEVIKAYKSVVLQATLPEALLSLTKVFIRDSDLNDVFTSELISNDESVGLVCSAGSTSEKSQSVNCEASRVPVSSSSTQLP  398
                EVQ SYKVGLFKHIK+LTYCFNSCGLQWFLL+RRSNLKFLKD  SSFANLSCEVIKAYKSVVLQATLPEALLSLTKVFIRDSDLN  F SEL S+DES+ LV SAGSTSEKSQSV+CEASRV V+SSSTQ P
Subject   1729  EVQKSYKVGLFKHIKSLTYCFNSCGLQWFLLKRRSNLKFLKDRVSSFANLSCEVIKAYKSVVLQATLPEALLSLTKVFIRDSDLNGAFNSELASHDESIRLVGSAGSTSEKSQSVSCEASRVLVNSSSTQPP  2124

Range 2: 1728 to 2123 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
227.9 bits(491) 0.0 115/132(87%) 0/132(0%) Minus/Minus
Query        2  GSWVLEELTGTLLASQLTDCDFSEVEPAEQTSPTDSSFEINSEVKTSFRSESLMKTLVRLSRASGRVACNTTDL*ALITSQLRLAKDDAPSFXXXXXXXXXXXNHWRPQELKQ*VRAFMCLKRPTL*EFWTS  397
                G WVLEE T TLLASQLTDCDFSEVEPAE TS  DSS E NSE+K   RSESLMKTLVRLSRASG VACNTTDL*ALITSQLRLAKDD  SFRNLRLDLRLRRNHWRPQELKQ*VR FMCLKRPTL*+FWTS
Subject   1728  GGWVLEEFTRTLLASQLTDCDFSEVEPAEPTSLIDSSCEANSELKAPLRSESLMKTLVRLSRASGSVACNTTDL*ALITSQLRLAKDDTLSFRNLRLDLRLRRNHWRPQELKQ*VRDFMCLKRPTL*DFWTS  2123

Range 3: 1729 to 2127 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
199.0 bits(428) 0.0 99/133(74%) 0/133(0%) Minus/Minus
Query        3  TRQLGA*RAHWNSASLTID*L*FLRG*TC*TNQSD*LII*D*FRGENII*IRISYENFS*A*QSFREGCL*HNRLVGLDNLTTKISKGRCSIFQKLEVGPSPKKEPLETTRIETISEGFYVLKKTHFVRILDL  401
                +R+LGA R H N ASLT D*L* LRG*  * N SD*LI+* *FR E  I I + YENFS A*QSFRE CL*+NRLVGLDNLTTKISKGR SIFQKLEVGP  K+EPLE TRIETISE FYVLK+ H VR LDL
Subject   1729  SRRLGARRVH*NPASLTTD*L*LLRG*AS*AN*SD*LIM*G*FRIEGTIKIGVPYENFSQA*QSFRECCL*YNRLVGLDNLTTKISKGRYSIFQKLEVGPPLKEEPLEATRIETISERFYVLKEAHLVRFLDL  2127

Range 4: 1727 to 2128 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
188.5 bits(405) 0.0 97/134(72%) 0/134(0%) Plus/Plus
Query        1  VRSKILTKWVFLST*KPSLIVSILVVSNGSFLGEGPTSSF*KMEHRPLLILVVRLSRPTSLLCYRQPSLKLC*A*LKFS*EILI*MMFSPLN*SQMMSQSDWFVQQVQPLRNHSQSIVRLAEFQ*ALQAPSCLV  402
                VRS+ LT+W  LST*  SLIVSILV SNGS L  GPTSSF*K+E+RPLLILVVRLSRPTSLL YRQ SLKLC*A*LKFS*   I M+ S LN*  MMSQSD   Q  QPLR+HSQS+VRLA F * L+APS L+
Subject   1727  VRSRNLTRWASLST*NLSLIVSILVASNGSSLSGGPTSSF*KIEYRPLLILVVRLSRPTSLLYYRQHSLKLC*A*LKFS*GTPILMVPSILN*PHMMSQSD*LAQLAQPLRSHSQSVVRLAGF**TLRAPSRLL  2128

Range 5: 1727 to 1921 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.4 bits(252) 0.0 52/65(80%) 0/65(0%) Minus/Minus
Query        1  PVTQQTCRP**PHN*D*QRTMLHLSET*GWTFA*EGTIGDHKN*NNK*GLLCA*KDPLCKNFGPH  195
                PV QQTCRP**PHN*D*QRT+L+LSET*GWT A* GTIG HKN*NNK* +LCA*+ P CK  GPH
Subject   1727  PVIQQTCRP**PHN*D*QRTILYLSET*GWTSA*GGTIGGHKN*NNK*EILCA*RGPPCKISGPH  1921

Range 6: 1970 to 2125 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.5 bits(176) 0.0 37/52(71%) 0/52(0%) Minus/Minus
Query      244  QAAGCLKSSLELC*PHN*LTVISQRLNLLNKPVRLTHHLRLIQR*KHHLDQN  399
                QAAGC KSSLE C*PHN*LTV SQRL+ L++ V LTHH+RLIQ *+HH D++
Subject   1970  QAAGCSKSSLEPC*PHN*LTVTSQRLSQLSQLV*LTHHVRLIQN*RHH*DRS  2125

Range 7: 1728 to 1922 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
121.6 bits(259) 0.0 53/65(82%) 0/65(0%) Plus/Plus
Query        2  *GPKFLQSGSF*AHKSPHLLFQFLWSPMVPS*AKVQPQVSERWSIVLC*S*L*GYQGLQVCCVTG  196
                *GP+ LQ G  *AHK  HLLFQFLW PMVP *A+VQPQVSER SIVLC*S*L*GYQGLQVCC+TG
Subject   1728  *GPEILQGGPL*AHKISHLLFQFLWPPMVPP*AEVQPQVSER*SIVLC*S*L*GYQGLQVCCITG  1922

Range 8: 1959 to 2069 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
33.6 bits(67) 0.0 19/37(51%) 0/37(0%) Plus/Plus
Query      233  FHKRF*SK*CFHL*INLK**VSRTGLFSRFNL*EITV  343
                FHK   S  C   *I+L **V++T   S  NL*E+TV
Subject   1959  FHKGLRS*WCLQF*ISLT**VNQTSWLSWLNL*EVTV  2069

Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome

Sequence ID: JX559646.1 Length: 8726 Number of Matches: 8

Range 1: 1729 to 2124 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
258.6 bits(562) 0.0 114/132(86%) 0/132(0%) Plus/Plus
Query        3  EVQNSYKVGLFKHIKALTYCFNSCGLQWFLLRRRSNLKFLKDGASSFANLSCEVIKAYKSVVLQATLPEALLSLTKVFIRDSDLNDVFTSELISNDESVGLVCSAGSTSEKSQSVNCEASRVPVSSSSTQLP  398
                EVQ SYKVGLFKHIK+LTYCFNSCGLQWFLL+RRSNLKFLKD  SSFANLSC+VIKAYKSVVLQATLPEALLSLTKVFIRDSDLN  F SEL S+DES+ LV SAGSTSEKSQSV+CEASRV V+SSSTQ P
Subject   1729  EVQKSYKVGLFKHIKSLTYCFNSCGLQWFLLKRRSNLKFLKDRVSSFANLSCKVIKAYKSVVLQATLPEALLSLTKVFIRDSDLNGAFNSELASHDESIRLVGSAGSTSEKSQSVSCEASRVLVNSSSTQPP  2124

Range 2: 1728 to 2123 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
225.1 bits(485) 0.0 114/132(86%) 0/132(0%) Minus/Minus
Query        2  GSWVLEELTGTLLASQLTDCDFSEVEPAEQTSPTDSSFEINSEVKTSFRSESLMKTLVRLSRASGRVACNTTDL*ALITSQLRLAKDDAPSFXXXXXXXXXXXNHWRPQELKQ*VRAFMCLKRPTL*EFWTS  397
                G WVLEE T TLLASQLTDCDFSEVEPAE TS  DSS E NSE+K   RSESLMKTLVRLSRASG VACNTTDL*ALIT QLRLAKDD  SFRNLRLDLRLRRNHWRPQELKQ*VR FMCLKRPTL*+FWTS
Subject   1728  GGWVLEEFTRTLLASQLTDCDFSEVEPAEPTSLIDSSCEANSELKAPLRSESLMKTLVRLSRASGSVACNTTDL*ALITLQLRLAKDDTLSFRNLRLDLRLRRNHWRPQELKQ*VRDFMCLKRPTL*DFWTS  2123

Range 3: 1729 to 2127 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
195.3 bits(420) 0.0 97/133(73%) 0/133(0%) Minus/Minus
Query        3  TRQLGA*RAHWNSASLTID*L*FLRG*TC*TNQSD*LII*D*FRGENII*IRISYENFS*A*QSFREGCL*HNRLVGLDNLTTKISKGRCSIFQKLEVGPSPKKEPLETTRIETISEGFYVLKKTHFVRILDL  401
                +R+LGA R H N ASLT D*L* LRG*  * N SD*LI+* *FR E  I I + YENFS A*Q FRE CL*+NRLVGLDNLTTKISKGR SIFQK EVGP  K+EPLE TRIETISE FYVLK+ H VR LDL
Subject   1729  SRRLGARRVH*NPASLTTD*L*LLRG*AS*AN*SD*LIM*G*FRIEGTIKIGVPYENFSQA*QGFRECCL*YNRLVGLDNLTTKISKGRYSIFQKFEVGPPLKEEPLEATRIETISERFYVLKEAHLVRFLDL  2127

Range 4: 1727 to 2128 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
183.9 bits(395) 0.0 95/134(71%) 0/134(0%) Plus/Plus
Query        1  VRSKILTKWVFLST*KPSLIVSILVVSNGSFLGEGPTSSF*KMEHRPLLILVVRLSRPTSLLCYRQPSLKLC*A*LKFS*EILI*MMFSPLN*SQMMSQSDWFVQQVQPLRNHSQSIVRLAEFQ*ALQAPSCLV  402
                VRS+ LT+W  LST*  SLIVSILV SNGS L  GPTS+F*K+E+RPLLILVVRLSRPTSLL YRQ SLK C*A*LKFS*   I M+ S LN*  MMSQSD   Q  QPLR+HSQS+VRLA F * L+APS L+
Subject   1727  VRSRNLTRWASLST*NLSLIVSILVASNGSSLSGGPTSNF*KIEYRPLLILVVRLSRPTSLLYYRQHSLKPC*A*LKFS*GTPILMVPSILN*PHMMSQSD*LAQLAQPLRSHSQSVVRLAGF**TLRAPSRLL  2128

Range 5: 1727 to 1921 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.9 bits(240) 0.0 50/65(77%) 0/65(0%) Minus/Minus
Query        1  PVTQQTCRP**PHN*D*QRTMLHLSET*GWTFA*EGTIGDHKN*NNK*GLLCA*KDPLCKNFGPH  195
                PV QQTCRP**P+N*D*QRT+L+LSE *GWT A* GTIG HKN*NNK* +LCA*+ P CK  GPH
Subject   1727  PVIQQTCRP**PYN*D*QRTILYLSEI*GWTSA*GGTIGGHKN*NNK*EILCA*RGPPCKISGPH  1921

Range 6: 1970 to 2125 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.5 bits(176) 0.0 37/52(71%) 0/52(0%) Minus/Minus
Query      244  QAAGCLKSSLELC*PHN*LTVISQRLNLLNKPVRLTHHLRLIQR*KHHLDQN  399
                QAAGC KSSLE C*PHN*LTV SQRL+ L++ V LTHH+RLIQ *+HH D++
Subject   1970  QAAGCSKSSLEPC*PHN*LTVTSQRLSQLSQLV*LTHHVRLIQN*RHH*DRS  2125

Range 7: 1728 to 1922 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
121.1 bits(258) 0.0 52/65(80%) 0/65(0%) Plus/Plus
Query        2  *GPKFLQSGSF*AHKSPHLLFQFLWSPMVPS*AKVQPQVSERWSIVLC*S*L*GYQGLQVCCVTG  196
                *GP+ LQ G  *AHK  HLLFQFLW PMVP *A+VQPQ+SER SIVLC*S*L*GYQGLQVCC+TG
Subject   1728  *GPEILQGGPL*AHKISHLLFQFLWPPMVPP*AEVQPQISER*SIVLC*S*L*GYQGLQVCCITG  1922

Range 8: 1959 to 2069 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
33.6 bits(67) 0.0 19/37(51%) 0/37(0%) Plus/Plus
Query      233  FHKRF*SK*CFHL*INLK**VSRTGLFSRFNL*EITV  343
                FHK   S  C   *I+L **V++T   S  NL*E+TV
Subject   1959  FHKGLRS*WCLQF*ISLT**VNQTSWLSWLNL*EVTV  2069

Grapevine rupestris stem pitting associated virus isolate GRSPaV WA, complete genome

Sequence ID: KC427107.1 Length: 8742 Number of Matches: 8

Range 1: 1729 to 2124 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
254.1 bits(552) 0.0 113/132(86%) 0/132(0%) Plus/Plus
Query        3  EVQNSYKVGLFKHIKALTYCFNSCGLQWFLLRRRSNLKFLKDGASSFANLSCEVIKAYKSVVLQATLPEALLSLTKVFIRDSDLNDVFTSELISNDESVGLVCSAGSTSEKSQSVNCEASRVPVSSSSTQLP  398
                EVQ SYKVGLFKHIK+LTYCFNSCGLQWFLL+RRSNLKFLKD  SSFANLSCEVIKAY SVVLQATLPEALLSLTKVFIRDSDLN  F SEL S+DES+ LV SAGST EKSQSV+CEASRV V+SSSTQ P
Subject   1729  EVQKSYKVGLFKHIKSLTYCFNSCGLQWFLLKRRSNLKFLKDRVSSFANLSCEVIKAYMSVVLQATLPEALLSLTKVFIRDSDLNGDFNSELASHDESIRLVGSAGSTPEKSQSVSCEASRVLVNSSSTQPP  2124

Range 2: 1728 to 2123 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
224.2 bits(483) 0.0 113/132(86%) 0/132(0%) Minus/Minus
Query        2  GSWVLEELTGTLLASQLTDCDFSEVEPAEQTSPTDSSFEINSEVKTSFRSESLMKTLVRLSRASGRVACNTTDL*ALITSQLRLAKDDAPSFXXXXXXXXXXXNHWRPQELKQ*VRAFMCLKRPTL*EFWTS  397
                G WVLEE T TLLASQLTDCDFS VEPAE TS  DSS E NSE+K+  RSESLMKTLVRLSRASG VACNTTD+*ALITSQLRLAKDD  SFRNLRLDLRLRRNHWRPQELKQ*VR FMCLKRPTL*+FWTS
Subject   1728  GGWVLEEFTRTLLASQLTDCDFSGVEPAEPTSLIDSSCEANSELKSPLRSESLMKTLVRLSRASGSVACNTTDM*ALITSQLRLAKDDTLSFRNLRLDLRLRRNHWRPQELKQ*VRDFMCLKRPTL*DFWTS  2123

Range 3: 1729 to 2127 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
192.1 bits(413) 0.0 97/133(73%) 0/133(0%) Minus/Minus
Query        3  TRQLGA*RAHWNSASLTID*L*FLRG*TC*TNQSD*LII*D*FRGENII*IRISYENFS*A*QSFREGCL*HNRLVGLDNLTTKISKGRCSIFQKLEVGPSPKKEPLETTRIETISEGFYVLKKTHFVRILDL  401
                +R+LGA R H N ASLT +*L* LRG*  * N SD*LI+* *FR E  I I + YENFS A*QSFRE CL*+NR VGLDNLTTKISKGR SIFQKLEVGP  K+EPLE TRIETISE FYVLK+ H VR LDL
Subject   1729  SRRLGARRVH*NPASLTTN*L*LLRG*AS*AN*SD*LIM*G*FRIEVTIKIGVPYENFSQA*QSFRECCL*YNRHVGLDNLTTKISKGRYSIFQKLEVGPPLKEEPLEATRIETISERFYVLKEAHLVRFLDL  2127

Range 4: 1727 to 2128 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
184.4 bits(396) 0.0 95/134(71%) 0/134(0%) Plus/Plus
Query        1  VRSKILTKWVFLST*KPSLIVSILVVSNGSFLGEGPTSSF*KMEHRPLLILVVRLSRPTSLLCYRQPSLKLC*A*LKFS*EILI*MMFSPLN*SQMMSQSDWFVQQVQPLRNHSQSIVRLAEFQ*ALQAPSCLV  402
                VRS+ LT+W  LST*  SLIVSILV SNGS L  GPTSSF*K+E+RPLLILVVRLSRPT LL YRQ SLKLC*A*LKFS*   I M+ S LN*  MMSQSD   Q  QPLR+HSQ +VRLA F * L+APS L+
Subject   1727  VRSRNLTRWASLST*NLSLIVSILVASNGSSLSGGPTSSF*KIEYRPLLILVVRLSRPTCLLYYRQHSLKLC*A*LKFS*GTPILMVTSILN*PHMMSQSD*LAQLAQPLRSHSQLVVRLAGF**TLRAPSRLL  2128

Range 5: 1727 to 1921 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.4 bits(252) 0.0 52/65(80%) 0/65(0%) Minus/Minus
Query        1  PVTQQTCRP**PHN*D*QRTMLHLSET*GWTFA*EGTIGDHKN*NNK*GLLCA*KDPLCKNFGPH  195
                PV QQTCRP**PHN*D*QRT+L+LSET*GWT A* GTIG HKN*NNK* +LCA*+ P CK  GPH
Subject   1727  PVIQQTCRP**PHN*D*QRTILYLSET*GWTSA*GGTIGGHKN*NNK*EILCA*RGPPCKISGPH  1921

Range 6: 1970 to 2125 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.4 bits(167) 0.0 36/52(69%) 0/52(0%) Minus/Minus
Query      244  QAAGCLKSSLELC*PHN*LTVISQRLNLLNKPVRLTHHLRLIQR*KHHLDQN  399
                QAAGC KSSLE C*PHN*LTV SQ L+ L++ V LTHH+RLIQ * HH D++
Subject   1970  QAAGCSKSSLEPC*PHN*LTVTSQGLSQLSQLV*LTHHVRLIQN*SHH*DRS  2125

Range 7: 1728 to 1922 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
119.3 bits(254) 0.0 52/65(80%) 0/65(0%) Plus/Plus
Query        2  *GPKFLQSGSF*AHKSPHLLFQFLWSPMVPS*AKVQPQVSERWSIVLC*S*L*GYQGLQVCCVTG  196
                *GP+ LQ G  *AHK  HLLFQFLW PMVP *A+VQPQVSER SIVLC*S*L*GYQGL VCC+TG
Subject   1728  *GPEILQGGPL*AHKISHLLFQFLWPPMVPP*AEVQPQVSER*SIVLC*S*L*GYQGLHVCCITG  1922

Range 8: 1959 to 2069 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.4 bits(47) 0.0 17/37(46%) 0/37(0%) Plus/Plus
Query      233  FHKRF*SK*CFHL*INLK**VSRTGLFSRFNL*EITV  343
                FHK   S      *I+L **V++T   S  N *E+TV
Subject   1959  FHKGLRS*W*LQF*ISLT**VNQTSWLSWLNP*EVTV  2069

Grapevine rupestris stem pitting associated virus isolate TEMP BR replicase, 24.4 kDa protein, 12.8 kDa protein, 8.4 kDa protein, and 28 kDa protein genes, complete cds

Sequence ID: KX925556.1 Length: 8700 Number of Matches: 8

Range 1: 1718 to 2113 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
265.5 bits(577) 0.0 114/132(86%) 0/132(0%) Plus/Plus
Query        3  EVQNSYKVGLFKHIKALTYCFNSCGLQWFLLRRRSNLKFLKDGASSFANLSCEVIKAYKSVVLQATLPEALLSLTKVFIRDSDLNDVFTSELISNDESVGLVCSAGSTSEKSQSVNCEASRVPVSSSSTQLP  398
                EVQNSYKVGLF+HIKALTYCFNSCGLQWF+L+RRSNLKFLKD ASSFA+LSCEVIK YKS+VLQATLPEALLSLTKVFIRDSDLND FTSEL SNDES+GLV SAGSTS   Q VNCEA RVPV+SSS QLP
Subject   1718  EVQNSYKVGLFRHIKALTYCFNSCGLQWFILKRRSNLKFLKDRASSFASLSCEVIKIYKSIVLQATLPEALLSLTKVFIRDSDLNDAFTSELASNDESIGLVRSAGSTSGNVQPVNCEAGRVPVNSSSIQLP  2113

Range 2: 1717 to 2112 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
229.7 bits(495) 0.0 116/132(88%) 0/132(0%) Minus/Minus
Query        2  GSWVLEELTGTLLASQLTDCDFSEVEPAEQTSPTDSSFEINSEVKTSFRSESLMKTLVRLSRASGRVACNTTDL*ALITSQLRLAKDDAPSFXXXXXXXXXXXNHWRPQELKQ*VRAFMCLKRPTL*EFWTS  397
                GS +LEE TGTL ASQLT C F EVEPAE+TSP DSSFE NSEVK SFRSESLMKTLVRLSRASG VACNT DL* LITSQLRLAKDDA SFRNLRLDLRLR NHWRPQELKQ*VRAFMCLKRPTL*EFWTS
Subject   1717  GS*MLEEFTGTLPASQLTGCTFPEVEPAERTSPIDSSFEANSEVKASFRSESLMKTLVRLSRASGSVACNTIDL*ILITSQLRLAKDDALSFRNLRLDLRLRMNHWRPQELKQ*VRAFMCLKRPTL*EFWTS  2112

Range 3: 1719 to 2117 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
212.8 bits(458) 0.0 104/133(78%) 0/133(0%) Plus/Plus
Query        4  RSKILTKWVFLST*KPSLIVSILVVSNGSFLGEGPTSSF*KMEHRPLLILVVRLSRPTSLLCYRQPSLKLC*A*LKFS*EILI*MMFSPLN*SQMMSQSDWFVQQVQPLRNHSQSIVRLAEFQ*ALQAPSCLV  402
                RSKILTKWVFL T*K SLIVSIL VSNGS L EGPTSSF*++ HRPLL+L  RLSR TSLL YRQ SLKLC*A*LKFS*EILI*MM SPLN* QMMSQSDWFVQ  QPL   SQ I RLA FQ* L+A +CL+
Subject   1719  RSKILTKWVFLGT*KLSLIVSILAVSNGSSLSEGPTSSF*RIGHRPLLVLAARLSRSTSLLYYRQHSLKLC*A*LKFS*EILI*MMPSPLN*PQMMSQSDWFVQLAQPLGMCSQLIARLAGFQ*TLRAFNCLL  2117

Range 4: 1718 to 2116 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
206.8 bits(445) 0.0 101/133(76%) 0/133(0%) Minus/Minus
Query        3  TRQLGA*RAHWNSASLTID*L*FLRG*TC*TNQSD*LII*D*FRGENII*IRISYENFS*A*QSFREGCL*HNRLVGLDNLTTKISKGRCSIFQKLEVGPSPKKEPLETTRIETISEGFYVLKKTHFVRILDL  401
                +RQL A R HWN ASL I+ L   RG*  *TNQSD*LII* *FRGE II IRISYENFS A QSFRE CL*+NRLV LDNL  K SKGRC I  KLEVGPS K EPLET RIETISE FYV KKTHFVRILDL
Subject   1718  SRQLNARRVHWNPASLAINWLHIPRG*AS*TNQSD*LII*G*FRGEGIIQIRISYENFSQAQQSFRECCL*YNRLVDLDNLAAKTSKGRCPIL*KLEVGPSLKDEPLETARIETISESFYVPKKTHFVRILDL  2116

Range 5: 1719 to 1910 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
108.7 bits(231) 0.0 51/64(80%) 0/64(0%) Minus/Minus
Query        4  PVTQQTCRP**PHN*D*QRTMLHLSET*GWTFA*EGTIGDHKN*NNK*GLLCA*KDPLCKNFGP  195
                PV Q TCR **P +*D*QRTM +  ET*GWTFA*  TIGD KN*NNK* LLCA*KDPLCKNFGP
Subject   1719  PVIQ*TCRS**PRS*D*QRTMPYPLET*GWTFA*G*TIGDRKN*NNK*ELLCA*KDPLCKNFGP  1910

Range 6: 1959 to 2114 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
86.8 bits(183) 0.0 38/52(73%) 0/52(0%) Minus/Minus
Query      244  QAAGCLKSSLELC*PHN*LTVISQRLNLLNKPVRLTHHLRLIQR*KHHLDQN  399
                QA  C KSSLE C P N*L   SQRL+ LN+PVRLTHHLRLIQR*+HH DQN
Subject   1959  QAVECSKSSLEPCQPRN*LAAHSQRLSQLNEPVRLTHHLRLIQR*RHHSDQN  2114

Range 7: 1720 to 1911 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
111.5 bits(237) 0.0 52/64(81%) 0/64(0%) Plus/Plus
Query        5  GPKFLQSGSF*AHKSPHLLFQFLWSPMVPS*AKVQPQVSERWSIVLC*S*L*GYQGLQVCCVTG  196
                GPKFLQSGSF*AHKS HLLFQFL SPMV  *AKVQPQVS+   IVLC*S*L GYQ LQV C+TG
Subject   1720  GPKFLQSGSF*AHKSSHLLFQFLRSPMVHP*AKVQPQVSKG*GIVLC*S*LRGYQDLQVYCITG  1911

Range 8: 1948 to 2112 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
60.2 bits(125) 0.0 37/55(67%) 0/55(0%) Plus/Plus
Query      233  FHKRF*SK*CFHL*INLK**VSRTGLFSRFNL*EITVXXXXXXXXXXELFKHPAA  397
                FHKRF*S+*C HL*I+LK**V+RTG FS  NL E   S L G Q SSELF+H  A
Subject   1948  FHKRF*SE*CLHL*ISLK**VNRTGSFSWLNLWECAAS*LRGWQGSSELFEHSTA  2112

Nucleotide Sequence (327 letters)

Query ID:ds2016-132_4
Query definition:No definition line
Query length:951
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 16 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
33
66
99
132
165
198
231
264
297
327

Descriptions

Alignments

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OB1

Sequence ID: AB277783.1 Length: 2876 Number of Matches: 8

Range 1: 605 to 928 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
255.4 bits(551) 0.0 105/108(97%) 0/108(0%) Plus/Plus
Query        3  RDMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGS  326
                R+MGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALS+WHGVIIMNNLVKALSTFEFVG+YSVLRFPVVVHSVPGS
Subject    605  REMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHGVIIMNNLVKALSTFEFVGIYSVLRFPVVVHSVPGS  928

Range 2: 606 to 926 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
202.7 bits(436) 0.0 87/107(81%) 0/107(0%) Minus/Minus
Query        4  YQERYERQLEI*AHYRHPQTQTWTKL*LSYS**SHHAKHLRPNL*LQTIQKLSISSCAYF*PGIAHSCSALQLLLHSSFQLTTRPTCRHRTPQLHNYQCSFPDYPCH  324
                YQER E+QLEI*A Y++PQTQT TKL*LSYS**SHHAK+LRPNL*LQT QKLS SSC YF* G AHSCS LQL LHSSFQLTTRP CRHR PQLH+YQCS P YP H
Subject    606  YQERCEQQLEI*ARYKYPQTQT*TKL*LSYS**SHHAKYLRPNL*LQTTQKLSTSSCVYF*LGTAHSCSVLQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFH  926

Range 3: 604 to 927 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
191.2 bits(411) 0.0 88/108(81%) 0/108(0%) Plus/Plus
Query        2  A*HG*SGKLH**LCN*GVLCLQVGRVVN*NDE*RRS*SALQLCAIPGQK*AQDEMLNFWIV*SYRLGLKCLAWCDYYE*LS*SFVHV*VCGCL*CAQISSCRS*RSW*  325
                +*+G* G+LH**LCN*G+LCLQ GRVVN*NDE*R S*S LQLCA+P  K* QDE+LNFW+V*SYRLGLK LAWCDYYE*LS*SFV+V*VCG L* AQISSC S RSW*
Subject    604  S*NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*STLQLCAVPS*K*TQDEVLNFWVV*SYRLGLKYLAWCDYYE*LS*SFVYV*VCGYL*RAQISSCCSQRSW*  927

Range 4: 604 to 864 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
184.4 bits(396) 0.0 84/87(97%) 0/87(0%) Minus/Minus
Query        2  NVDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSMQFSRLPMSR  262
                NVDKALTKLFIIITPCQ LKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSP+L*A*DTSIA*LSMQFSRLP+SR
Subject    604  NVDKALTKLFIIITPCQILKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISR  864

Range 5: 719 to 925 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
137.6 bits(294) 0.0 58/69(84%) 0/69(0%) Minus/Minus
Query      117  TRNAMNDNWKSEHTIDTHKLKRGQSFN*VIHNNHTMPNT*GLIYSFKQSRN*ASHLVLISDQESHTVVV  323
                TRNA+N+NWKSEH I+THKLKR QSFN*VIHNNHTMPNT*GLIYSFKQ RN*A HLV IS+ E HTVVV
Subject    719  TRNAVNNNWKSEHAINTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQPRN*APHLVFISN*EPHTVVV  925

Range 6: 605 to 682 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.1 bits(116) 0.0 21/26(81%) 0/26(0%) Minus/Minus
Query        3  QLAQPVGIGHLNCIIINAVFQITHVT  80
                QLAQPVGIG+LNCI+INAV Q+TH T
Subject    605  QLAQPVGIGYLNCIVINAVLQVTHFT  682

Range 7: 720 to 926 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
120.2 bits(256) 0.0 58/69(84%) 0/69(0%) Plus/Plus
Query      118  TTTVCDSWSEISTR*DAQFLDCLKL*IRP*VFGMV*LL*IT*LKLCPRLSLWVSIVCSDFQLSFIAFLV  324
                TTTVC S  EI+TR* AQFL CLKL*IRP*VFGMV*LL*IT*LKLC RLSLWV I CSDFQL F AFLV
Subject    720  TTTVCGS*LEINTR*GAQFLGCLKL*IRP*VFGMV*LL*IT*LKLCLRLSLWVFIACSDFQLLFTAFLV  926

Range 8: 606 to 686 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
60.6 bits(126) 0.0 22/27(81%) 0/27(0%) Plus/Plus
Query        4  VTWVIWKTALIIMQLRCPMPTGWASCQ  84
                V WV W+TALI MQLR PMPTGWASCQ
Subject    606  VKWVTWRTALITMQLRYPMPTGWASCQ  686

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 7

Range 1: 6349 to 6672 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
254.9 bits(550) 0.0 106/108(98%) 0/108(0%) Plus/Plus
Query        3  RDMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGS  326
                R+MGNLENCIDNYAIEVSYAYRLGEL+IEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGS
Subject   6349  REMGNLENCIDNYAIEVSYAYRLGELAIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGS  6672

Range 2: 6350 to 6670 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
211.4 bits(455) 0.0 90/107(84%) 0/107(0%) Minus/Minus
Query        4  YQERYERQLEI*AHYRHPQTQTWTKL*LSYS**SHHAKHLRPNL*LQTIQKLSISSCAYF*PGIAHSCSALQLLLHSSFQLTTRPTCRHRTPQLHNYQCSFPDYPCH  324
                YQERYE+QLEI*A Y+HPQTQT TKL*LSYS**SHHAKHLRPNL*LQT QKLS SSCAYF* G AHSCS LQL LHSSFQL TRP CRHR PQLH+YQCS P YP H
Subject   6350  YQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*LGTAHSCSVLQLPLHSSFQLPTRPACRHRIPQLHSYQCSSPGYPFH  6670

Range 3: 6348 to 6671 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
202.2 bits(435) 0.0 91/108(84%) 0/108(0%) Plus/Plus
Query        2  A*HG*SGKLH**LCN*GVLCLQVGRVVN*NDE*RRS*SALQLCAIPGQK*AQDEMLNFWIV*SYRLGLKCLAWCDYYE*LS*SFVHV*VCGCL*CAQISSCRS*RSW*  325
                +*+G* G+LH**LCN*G+LCLQ GRV N*NDE*R S*S LQLCA+P  K*AQDE+LNFW+V*SYRLGLKCLAWCDYYE*LS*SFV+V*VCGCL* AQISSC S*RSW*
Subject   6348  S*NG*PGELH**LCN*GILCLQAGRVGN*NDE*RGS*STLQLCAVPS*K*AQDEVLNFWVV*SYRLGLKCLAWCDYYE*LS*SFVYV*VCGCL*RAQISSCCS*RSW*  6671

Range 4: 6349 to 6669 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
188.0 bits(404) 0.0 90/107(84%) 0/107(0%) Minus/Minus
Query        3  TRNAMNDNWKSEHTIDTHKLKRGQSFN*VIHNNHTMPNT*GLIYSFKQSRN*ASHLVLISDQESHTVVVRXXXXXXXXXX*QLAQPVGIGHLNCIIINAVFQITHVT  323
                TRNAMN+NWKSEH I+THKLKR QSFN*VIHNNHTMPNT*GLIYSFKQ RN*A HLVLIS+ E HTVVV FNF FIHHFN QLAQPVGIG+LNCI+INAV Q+TH T
Subject   6349  TRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQPRN*APHLVLISN*EPHTVVVCFNFLFIHHFNCQLAQPVGIGYLNCIVINAVLQVTHFT  6669

Range 5: 6348 to 6608 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
183.4 bits(394) 0.0 84/87(97%) 0/87(0%) Minus/Minus
Query        2  NVDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSMQFSRLPMSR  262
                NVDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISI NSP+L*A*DTSIA*LSMQFSRLP+SR
Subject   6348  NVDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIANSPSL*A*DTSIA*LSMQFSRLPISR  6608

Range 6: 6464 to 6670 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.9 bits(264) 0.0 60/69(87%) 0/69(0%) Plus/Plus
Query      118  TTTVCDSWSEISTR*DAQFLDCLKL*IRP*VFGMV*LL*IT*LKLCPRLSLWVSIVCSDFQLSFIAFLV  324
                TTTVC S  EISTR* AQFL CLKL*IRP*VFGMV*LL*IT*LKLC RLSLWV I CSDFQL FIAFLV
Subject   6464  TTTVCGS*LEISTR*GAQFLGCLKL*IRP*VFGMV*LL*IT*LKLCLRLSLWVFIACSDFQLLFIAFLV  6670

Range 7: 6350 to 6430 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.6 bits(115) 0.0 21/27(78%) 0/27(0%) Plus/Plus
Query        4  VTWVIWKTALIIMQLRCPMPTGWASCQ  84
                V WV W+TALI MQLR PMPTGWAS Q
Subject   6350  VKWVTWRTALITMQLRYPMPTGWASWQ  6430

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 7

Range 1: 6349 to 6672 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
248.5 bits(536) 0.0 105/108(97%) 0/108(0%) Plus/Plus
Query        3  RDMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGS  326
                R+MGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWH  IIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGS
Subject   6349  REMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHY*IIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGS  6672

Range 2: 6350 to 6670 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
224.2 bits(483) 0.0 95/107(89%) 0/107(0%) Minus/Minus
Query        4  YQERYERQLEI*AHYRHPQTQTWTKL*LSYS**SHHAKHLRPNL*LQTIQKLSISSCAYF*PGIAHSCSALQLLLHSSFQLTTRPTCRHRTPQLHNYQCSFPDYPCH  324
                YQERYE+QLEI*A Y+HPQTQT TKL*LSYS**S++AKHLRPNL*LQTIQKLSISSCAYF*PG AHSCSALQL LHSSFQLTTRPTCRHRTPQLHNYQC+FP  P H
Subject   6350  YQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SNNAKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQLPLHSSFQLTTRPTCRHRTPQLHNYQCNFPGCPFH  6670

Range 3: 6348 to 6671 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
203.6 bits(438) 0.0 96/108(89%) 0/108(0%) Plus/Plus
Query        2  A*HG*SGKLH**LCN*GVLCLQVGRVVN*NDE*RRS*SALQLCAIPGQK*AQDEMLNFWIV*SYRLGLKCLAWCDYYE*LS*SFVHV*VCGCL*CAQISSCRS*RSW*  325
                +*+G  GKLH**LCN*GVLCLQVGRVVN*NDE*R S*SALQLCA+PG K*AQDEMLNFWIV*SYRLGLKCLA  DYYE*LS*SFV+V*VCGCL* AQISSC S*RSW*
Subject   6348  S*NGQPGKLH**LCN*GVLCLQVGRVVN*NDE*RGS*SALQLCAVPG*K*AQDEMLNFWIV*SYRLGLKCLALLDYYE*LS*SFVYV*VCGCL*RAQISSCCS*RSW*  6671

Range 4: 6349 to 6669 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.4 bits(418) 0.0 94/107(88%) 0/107(0%) Minus/Minus
Query        3  TRNAMNDNWKSEHTIDTHKLKRGQSFN*VIHNNHTMPNT*GLIYSFKQSRN*ASHLVLISDQESHTVVVRXXXXXXXXXX*QLAQPVGIGHLNCIIINAVFQITHVT  323
                TRNAMN+NWKSEH I+THKLKR QSFN*VIHNN  MPNT*GLIYSFKQSRN*ASHLVLIS+QE HTVVVRFNF FIHHFN*QLAQPVGIGHLNCIIINA+FQ+ H T
Subject   6349  TRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNLIMPNT*GLIYSFKQSRN*ASHLVLISNQEPHTVVVRFNFLFIHHFN*QLAQPVGIGHLNCIIINAIFQVAHFT  6669

Range 5: 6348 to 6608 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
180.2 bits(387) 0.0 84/87(97%) 0/87(0%) Minus/Minus
Query        2  NVDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSMQFSRLPMSR  262
                NVDKALTKLFIII  CQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSMQFSRLP+SR
Subject   6348  NVDKALTKLFIII**CQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSMQFSRLPISR  6608

Range 6: 6461 to 6670 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
134.9 bits(288) 0.0 61/70(87%) 0/70(0%) Plus/Plus
Query      115  RTTTVCDSWSEISTR*DAQFLDCLKL*IRP*VFGMV*LL*IT*LKLCPRLSLWVSIVCSDFQLSFIAFLV  324
                RTTTVC SW EISTR*DAQFLDCLKL*IRP*VFG++ LL*IT*LKLC RLSLWV I CSDFQL FIAFLV
Subject   6461  RTTTVCGSWLEISTR*DAQFLDCLKL*IRP*VFGIIRLL*IT*LKLCLRLSLWVFIACSDFQLLFIAFLV  6670

Range 7: 6350 to 6430 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
64.8 bits(135) 0.0 23/27(85%) 0/27(0%) Plus/Plus
Query        4  VTWVIWKTALIIMQLRCPMPTGWASCQ  84
                V W  WK ALIIMQLRCPMPTGWASCQ
Subject   6350  VKWATWKIALIIMQLRCPMPTGWASCQ  6430

Grapevine Rupestris stem pitting associated virus, complete genome

Sequence ID: AF026278.1 Length: 8725 Number of Matches: 8

Range 1: 6349 to 6672 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
241.2 bits(520) 0.0 99/108(92%) 0/108(0%) Plus/Plus
Query        3  RDMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGS  326
                R+MGNLENCIDNYAIEVSYAYRLGELSIEMM EEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALS+WH + IMNNLVKALSTFEFVGV+SVL+FPVV+HSVPGS
Subject   6349  REMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHYLSIMNNLVKALSTFEFVGVFSVLKFPVVIHSVPGS  6672

Range 2: 6351 to 6608 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
143.1 bits(306) 0.0 68/86(79%) 0/86(0%) Minus/Minus
Query        5  NVDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSMQFSRLPMS  262
                NVD ALTKLFII+  CQ LKA*SIASN PEIEHLILCLFLT+N TQL* ASTSSS IIS+D+SP+  A*+TSIA*LS+QFSRLP+S
Subject   6351  NVDNALTKLFIILK*CQILKA*SIASNRPEIEHLILCLFLTKNLTQL*WASTSSSVIISMDSSPSRYA*ETSIA*LSIQFSRLPIS  6608

Range 3: 6463 to 6669 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.7 bits(209) 0.0 42/69(61%) 0/69(0%) Minus/Minus
Query      117  TRNAMNDNWKSEHTIDTHKLKRGQSFN*VIHNNHTMPNT*GLIYSFKQSRN*ASHLVLISDQESHTVVV  323
                TR+ MND WK +HT +T+KLK  Q FN*+IHN   MPNT*GLI  FK + N*ASHL+L+ DQES+T+++
Subject   6463  TRHTMNDYWKFKHTENTYKLKC*QCFN*IIHNTQIMPNT*GLINRFK*A*N*ASHLMLVPDQESNTIIM  6669

Range 4: 6352 to 6423 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.5 bits(69) 0.0 13/24(54%) 0/24(0%) Minus/Minus
Query        6  LAQPVGIGHLNCIIINAVFQITHV  77
                L+QPV IG L  II+N + Q+TH+
Subject   6352  LSQPVRIGDLYRIIVNTILQVTHL  6423

Range 5: 6357 to 6671 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
108.7 bits(231) 0.0 59/105(56%) 0/105(0%) Plus/Plus
Query       11  G*SGKLH**LCN*GVLCLQVGRVVN*NDE*RRS*SALQLCAIPGQK*AQDEMLNFWIV*SYRLGLKCLAWCDYYE*LS*SFVHV*VCGCL*CAQISSCRS*RSW*  325
                G* G+L+* LC+ G+LC+  GR ++*ND+  RS   L LC I GQ+ A DEMLNF  +*S  LGLK LA  +YYE* S*S V++*VC C  CA ISS  S* +W*
Subject   6357  G*PGELY*QLCDRGLLCVPAGRAIH*NDDRGRSGGPL*LC*ILGQEQA*DEMLNFRPI*SD*LGLKYLALFEYYE*FS*SIVNI*VCRCFQCA*ISSSHS*CAW*  6671

Range 6: 6356 to 6670 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
103.2 bits(219) 0.0 57/105(54%) 0/105(0%) Minus/Minus
Query       10  YQERYERQLEI*AHYRHPQTQTWTKL*LSYS**SHHAKHLRPNL*LQTIQKLSISSCAYF*PGIAHSCSALQLLLHSSFQLTTRPTCRHRTPQLHNYQCSFPDYP  324
                YQ  YE  LEI*AH +H QTQ  T L*L+YS* S++AK+LRPN  LQ   KLSISS A  *P I H+ +   LL  SSFQ    P   HR P  HN Q + P YP
Subject   6356  YQAHYE*LLEI*AH*KHLQTQMLTML*LNYS*YSNNAKYLRPNQSLQIGLKLSISSYACS*PRI*HNYNGPPLLPRSSFQWIALPAGTHRRPLSHNCQYNSPGYP  6670

Range 7: 6473 to 6670 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.7 bits(161) 0.0 42/66(64%) 0/66(0%) Plus/Plus
Query      127  VCDSWSEISTR*DAQFLDCLKL*IRP*VFGMV*LL*IT*LKLCPRLSLWVSIVCSDFQLSFIAFLV  324
                V DSWS  S R*DAQF   LK  IRP*VFG++*+L*I *LK C  LSL V  VC +FQ SFI  LV
Subject   6473  VLDSWSGTSIR*DAQFQAYLKRLIRP*VFGII*VL*II*LKHCQHLSL*VFSVCLNFQ*SFIVCLV  6670

Range 8: 6356 to 6424 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.8 bits(74) 0.0 13/23(57%) 0/23(0%) Plus/Plus
Query       10  WVIWKTALIIMQLRCPMPTGWAS  78
                WV W+  L IM+ R PM TGW S
Subject   6356  WVTWRIVLTIMR*RSPMRTGWES  6424

Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome

Sequence ID: JX559646.1 Length: 8726 Number of Matches: 9

Range 1: 6349 to 6672 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
240.3 bits(518) 0.0 97/108(90%) 0/108(0%) Plus/Plus
Query        3  RDMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGS  326
                R+MGNLENCIDNYAIEVSYAYRLGELSIEMM EEEVEAHYNCVRFLVRNKHKMRCSISGLFEA+D*ALS+WH + IMNNLVKALSTFEF+GV+SVL+FPVV+HSVPGS
Subject   6349  REMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAVD*ALSIWHCLSIMNNLVKALSTFEFIGVFSVLKFPVVIHSVPGS  6672

Range 2: 6351 to 6605 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
154.6 bits(331) 0.0 72/85(85%) 0/85(0%) Minus/Minus
Query        5  VDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSMQFSRLPMS  259
                VD ALTKLFII+  CQ LKA*S ASN PEIEHLILCLFLTRN TQL*CASTSSS IIS+D+SPNL A*DTSIA*LSMQFSRLP+S
Subject   6351  VDNALTKLFIILKQCQILKA*STASNRPEIEHLILCLFLTRNLTQL*CASTSSSVIISMDSSPNLYA*DTSIA*LSMQFSRLPIS  6605

Range 3: 6463 to 6666 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
81.7 bits(172) 0.0 36/68(53%) 0/68(0%) Minus/Minus
Query      117  RNAMNDNWKSEHTIDTHKLKRGQSFN*VIHNNHTMPNT*GLIYSFKQSRN*ASHLVLISDQESHTVVV  320
                R  M ++WK +HT +T+K +  Q FN +IHN  TMPNT*GLI  FK + N*A HL+L+ + E HT+VV
Subject   6463  RYTMYNDWKFKHTENTYKFEG*QCFNQIIHNTQTMPNT*GLINRFK*A*N*APHLMLVPN*EPHTIVV  6666

Range 4: 6356 to 6442 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.0 bits(81) 0.0 16/29(55%) 0/29(0%) Minus/Minus
Query       10  SSFQLTTRPTCRHRTPQLHNYQCSFPDYP  96
                SSF+    P   HRTP  HNYQCS  D P
Subject   6356  SSFRWIAHPIYMHRTPLSHNYQCSSLDCP  6442

Range 5: 6357 to 6668 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
87.7 bits(185) 0.0 49/104(47%) 0/104(0%) Plus/Plus
Query       11  G*SGKLH**LCN*GVLCLQVGRVVN*NDE*RRS*SALQLCAIPGQK*AQDEMLNFWIV*SYRLGLKCLAWCDYYE*LS*SFVHV*VCGCL*CAQISSCRS*RSW  322
                G S +LH**LC+ GVLC+ +G  ++ ND+       LQLC +P  + A DE+LNF  +*S  LGLK LA  +YYE*  *S V++ +  C  CA ISS  +* +W
Subject   6357  GQSRELH**LCDRGVLCI*IG*AIHRNDDRGGGGGTLQLCEVPS*EQA*DEVLNFRPI*SG*LGLKYLALFEYYE*FG*SIVNLRIYRCFQCA*ISSRYT*CTW  6668

Range 6: 6464 to 6667 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.8 bits(111) 0.0 35/68(51%) 0/68(0%) Plus/Plus
Query      118  TTTVCDSWSEISTR*DAQFLDCLKL*IRP*VFGMV*LL*IT*LKLCPRLSLWVSIVCSDFQLSFIAFL  321
                TT V  S    S R* AQF   LK  IRP*VFG+V*+L*I  LK C   +L V  VC +FQ  +I +L
Subject   6464  TTIV*GS*LGTSIR*GAQFQAYLKRLIRP*VFGIV*VL*IIWLKHCQPSNL*VFSVCLNFQSLYIVYL  6667

Range 7: 6356 to 6424 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.3 bits(73) 0.0 14/23(61%) 0/23(0%) Plus/Plus
Query       10  WVIWKTALIIMQLRCPMPTGWAS  78
                W I +TALIIM+ RCPM   W S
Subject   6356  WAI*RTALIIMR*RCPMHIDWVS  6424

Range 8: 6464 to 6667 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.3 bits(121) 0.0 35/68(51%) 0/68(0%) Minus/Minus
Query      118  QERYERQLEI*AHYRHPQTQTWTKL*LSYS**SHHAKHLRPNL*LQTIQKLSISSCAYF*PGIAHSCS  321
                Q  Y  +LEI*AH +H   +  T L* +YS* S++AK+LRPN  LQ   KLS SS A  * G +H+CS
Subject   6464  QVHYV*RLEI*AH*KHL*IRRLTML*PNYS*YSNNAKYLRPNQPLQIGLKLSTSSYACS*LGTSHNCS  6667

Range 9: 6349 to 6423 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.9 bits(61) 0.0 14/25(56%) 0/25(0%) Minus/Minus
Query        3  LAQPVGIGHLNCIIINAVFQITHVT  77
                L Q + IGHL  IIINAV  I H++
Subject   6349  LTQSICIGHLYRIIINAVL*IAHLS  6423

Nucleotide Sequence (350 letters)

Query ID:ds2016-132_4
Query definition:No definition line
Query length:951
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 16 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
35
70
105
140
175
210
245
280
315
350

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus complete genome, genomic RNA, isolate GRSPaV MG

Sequence ID: FR691076.1 Length: 8749 Number of Matches: 7

Range 1: 3226 to 3573 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
273.7 bits(591) 0.0 112/116(97%) 0/116(0%) Plus/Plus
Query        2  QIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGFALKAGIRSFVESERLISSDLSAPTISKQLEENACAESEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILSSK  349
                QIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGFALKAGIRSFVESERLISSDLSAPTISKQLEENA AE+EMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGIL  K
Subject   3226  QIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGFALKAGIRSFVESERLISSDLSAPTISKQLEENAYAENEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLK  3573

Range 2: 3226 to 3573 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
254.9 bits(550) 0.0 108/116(93%) 0/116(0%) Minus/Minus
Query        2  LGGKNST*GPLTFPKFPTNFIFWCYYYQPYVVPDTK*CNHLTLGTSILLQLFRNSWS*KI*TNKALTLHKRSNAGLQSKTISTEQETN*MPKAIAITRYGESVKIINIIISTCLNL  349
                L  KNST*GPLTFPK PTNFIFWCYYYQPYVVPDTK*CNHL LG SIL QLFRN WS*KI*TNKALTLHKRSNAGLQSKTISTEQ+TN*MPKAIAITRYGESVKIINIIISTCLNL
Subject   3226  LQAKNST*GPLTFPKLPTNFIFWCYYYQPYVVPDTK*CNHLILGISILFQLFRNGWS*KI*TNKALTLHKRSNAGLQSKTISTEQKTN*MPKAIAITRYGESVKIINIIISTCLNL  3573

Range 3: 3227 to 3565 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
230.6 bits(497) 0.0 109/113(96%) 0/113(0%) Minus/Minus
Query        3  KEFHIGATHFPQISNXXXXXXXXXXXLRGAGYKIMQSSHSRHKHSPPIV*K*LELKDLN**GAHSPQKIECRPSEQNHQY*ARNQLNAKSNCHHQVRRKC*NHQYHNQHMPQS  341
                KEFHIGATHFPQ SN*LHILVLLLSALRGAGYKIMQSSHSRHKHS PIV*K LELKDLN**GAHSPQKIECRPSEQNHQY*A NQLNAKSNCHHQVRRKC*NHQYHNQHMPQS
Subject   3227  KEFHIGATHFPQTSN*LHILVLLLSALRGAGYKIMQSSHSRHKHSLPIV*KWLELKDLN**GAHSPQKIECRPSEQNHQY*AENQLNAKSNCHHQVRRKC*NHQYHNQHMPQS  3565

Range 4: 3261 to 3566 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
229.7 bits(498) 0.0 97/102(95%) 0/102(0%) Minus/Minus
Query       37  ERIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQNNAIISLSAQAFSSNCLEIVGAERSELIRRSLSTKDRMPAFRAKPSVLSKKPTECQKQLPSPGTEKVLK  342
                +RIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQNNAIIS SA AFSSNCLE+VGAERSELIRRSLSTKDRMPAFRAKPSVLS+KPTECQKQLPSPGTEKVLK
Subject   3261  QRIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQNNAIISFSA*AFSSNCLEMVGAERSELIRRSLSTKDRMPAFRAKPSVLSRKPTECQKQLPSPGTEKVLK  3566

Range 5: 3225 to 3383 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
126.6 bits(270) 0.0 52/53(98%) 0/53(0%) Plus/Plus
Query        1  PD*GMC*L*Y**F*HFLRTW*WQLLLAFSWFLAQY*WFCSEGRHSIFCGE*AP  159
                PD*GMC*L*Y**F*HFLRTW*WQLLLAFSWF AQY*WFCSEGRHSIFCGE*AP
Subject   3225  PD*GMC*L*Y**F*HFLRTW*WQLLLAFSWFSAQY*WFCSEGRHSIFCGE*AP  3383

Range 6: 3420 to 3563 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.4 bits(239) 0.0 46/48(96%) 0/48(0%) Plus/Plus
Query      196  TIGGECLCRE*DDCIILYPAPRKADSSNTRI*S*LEIWGK*VAPMWNS  339
                TIG ECLCRE*DDCIILYPAPRKADSSNTRI*S*LE+WGK*VAPMWNS
Subject   3420  TIGRECLCRE*DDCIILYPAPRKADSSNTRI*S*LEVWGK*VAPMWNS  3563

Range 7: 3227 to 3565 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
184.8 bits(397) 0.0 107/113(95%) 0/113(0%) Plus/Plus
Query        3  RLRHVLIMILMILTLSPYLVMAIAFGIQXXXXXXXXXXXXRPAFDLLWRVSAXXXXXXXXXXXXNNWRRMLVPRVR*LHYFVSGTT*G****HQNMKLVGNLGKVSGPYVEFF  341
                RLRHVLIMILMILTLSPYLVMAIAFGIQLV CSVLMVLL*RPAFDLLWRVSALLVQIFQLQ FLNNW+RML+PR+R*LHYFVSGTT*G****HQNMKLVG+LGKVSGPYVEFF
Subject   3227  RLRHVLIMILMILTLSPYLVMAIAFGIQLVFCSVLMVLL*RPAFDLLWRVSALLVQIFQLQPFLNNWKRMLMPRMR*LHYFVSGTT*G****HQNMKLVGSLGKVSGPYVEFF  3565

Grapevine rupestris stem pitting associated virus isolate TEMP BR replicase, 24.4 kDa protein, 12.8 kDa protein, 8.4 kDa protein, and 28 kDa protein genes, complete cds

Sequence ID: KX925556.1 Length: 8700 Number of Matches: 8

Range 1: 3215 to 3562 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
270.0 bits(583) 0.0 109/116(94%) 0/116(0%) Plus/Plus
Query        2  QIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGFALKAGIRSFVESERLISSDLSAPTISKQLEENACAESEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILSSK  349
                QIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDG ALKAGIRSFVESERL+SSDLSAPT+SKQLEENA AE+EMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGIL  K
Subject   3215  QIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESERLVSSDLSAPTVSKQLEENAYAENEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLK  3562

Range 2: 3250 to 3555 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
227.8 bits(494) 0.0 97/102(95%) 0/102(0%) Minus/Minus
Query       37  ERIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQNNAIISLSAQAFSSNCLEIVGAERSELIRRSLSTKDRMPAFRAKPSVLSKKPTECQKQLPSPGTEKVLK  342
                +RIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQNNAIIS SA AFSSNCLE VGAERSEL RRSLSTKDRMPAFRAKPSVLSKKPTECQKQLPSPGTEKVLK
Subject   3250  QRIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQNNAIISFSA*AFSSNCLETVGAERSELTRRSLSTKDRMPAFRAKPSVLSKKPTECQKQLPSPGTEKVLK  3555

Range 3: 3215 to 3562 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
221.9 bits(478) 0.0 95/116(82%) 0/116(0%) Minus/Minus
Query        2  LGGKNST*GPLTFPKFPTNFIFWCYYYQPYVVPDTK*CNHLTLGTSILLQLFRNSWS*KI*TNKALTLHKRSNAGLQSKTISTEQETN*MPKAIAITRYGESVKIINIIISTCLNL  349
                L  KNST*GPLTFPKFPTNFIFWCYYYQ Y+VPDT+ CNHL L  SI  QLFRN WS*KI*TN ALTLHKRSNA LQS T+STE ETN*MPKAIA+TRY ES+KIINIIISTCL L
Subject   3215  LQAKNST*GPLTFPKFPTNFIFWCYYYQSYMVPDTEQCNHLILSISIFFQLFRNGWS*KI*TN*ALTLHKRSNASLQS*TVSTE*ETN*MPKAIAVTRYRESIKIINIIISTCLYL  3562

Range 4: 3216 to 3554 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
198.1 bits(426) 0.0 96/113(85%) 0/113(0%) Minus/Minus
Query        3  KEFHIGATHFPQISNXXXXXXXXXXXLRGAGYKIMQSSHSRHKHSPPIV*K*LELKDLN**GAHSPQKIECRPSEQNHQY*ARNQLNAKSNCHHQVRRKC*NHQYHNQHMPQS  341
                KEFHIGATHFPQISN*LHILVLLLS L GAGY+ MQSSHS+HKH  PIV*K LELKDLN* GAHSPQKIEC+PSE N QY* RNQLNAKSNC HQV+RK *NHQYHNQHMP S
Subject   3216  KEFHIGATHFPQISN*LHILVLLLSVLHGAGYRTMQSSHSQHKHFLPIV*KRLELKDLN*LGAHSPQKIECQPSELNRQY*VRNQLNAKSNCRHQVQRKY*NHQYHNQHMPLS  3554

Range 5: 3409 to 3552 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.0 bits(214) 0.0 42/48(88%) 0/48(0%) Plus/Plus
Query      196  TIGGECLCRE*DDCIILYPAPRKADSSNTRI*S*LEIWGK*VAPMWNS  339
                TIG +CLC E*DDCI+LYPAP K DSSNTRI*S*LEIWGK*VAPMWNS
Subject   3409  TIGRKCLC*E*DDCIVLYPAPCKTDSSNTRI*S*LEIWGK*VAPMWNS  3552

Range 6: 3214 to 3372 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
97.7 bits(207) 0.0 45/53(85%) 0/53(0%) Plus/Plus
Query        1  PD*GMC*L*Y**F*HFLRTW*WQLLLAFSWFLAQY*WFCSEGRHSIFCGE*AP  159
                PD GMC*L*Y**F*+FL TW* QLLLAFSWFL QY* F SEG HSIFCGE*AP
Subject   3214  PDRGMC*L*Y**F*YFLCTW*RQLLLAFSWFLTQY*RFSSEGWHSIFCGE*AP  3372

Range 7: 3336 to 3554 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
107.4 bits(228) 0.0 61/73(84%) 0/73(0%) Plus/Plus
Query      123  RPAFDLLWRVSAXXXXXXXXXXXXNNWRRMLVPRVR*LHYFVSGTT*G****HQNMKLVGNLGKVSGPYVEFF  341
                R AFDLLWRVSA LVQIFQLQ FLNNW++ML+ R+R*LH  VSGT * ****HQNMKLVGNLGKVSGPYVEFF
Subject   3336  RLAFDLLWRVSA*LVQIFQLQPFLNNWKKMLMLRMR*LHCSVSGTM*D****HQNMKLVGNLGKVSGPYVEFF  3554

Range 8: 3216 to 3299 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.1 bits(103) 0.0 24/28(86%) 0/28(0%) Plus/Plus
Query        3  RLRHVLIMILMILTLSPYLVMAIAFGIQ  86
                R RHVLIMILMIL LS YLV AIAFGIQ
Subject   3216  R*RHVLIMILMILILSLYLVTAIAFGIQ  3299

Grapevine rupestris stem pitting associated virus isolate SK704 C, complete genome

Sequence ID: KX274276.1 Length: 8726 Number of Matches: 7

Range 1: 3227 to 3574 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
270.0 bits(583) 0.0 109/116(94%) 0/116(0%) Plus/Plus
Query        2  QIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGFALKAGIRSFVESERLISSDLSAPTISKQLEENACAESEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILSSK  349
                QIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDG ALKAGIRSFVESERL+SSDLSAPTISKQLEENA AE+EMIALFC+RHHVRLIVVTPEYEVSWKFGESEWPLCGIL  K
Subject   3227  QIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESERLVSSDLSAPTISKQLEENAYAENEMIALFCVRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLK  3574

Range 2: 3227 to 3574 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
241.6 bits(521) 0.0 102/116(88%) 0/116(0%) Minus/Minus
Query        2  LGGKNST*GPLTFPKFPTNFIFWCYYYQPYVVPDTK*CNHLTLGTSILLQLFRNSWS*KI*TNKALTLHKRSNAGLQSKTISTEQETN*MPKAIAITRYGESVKIINIIISTCLNL  349
                L  KNST* PLTFPKFPTNFIFWCY+YQPYVVPDTK*CNH      ILLQLFRNSWS*KI*TN+A T H+RSNAGLQSKTISTEQETN*MPKAIAITRYGESVKIINIIISTCLNL
Subject   3227  LQAKNST*RPLTFPKFPTNFIFWCYHYQPYVVPDTK*CNHFIFSIGILLQLFRNSWS*KI*TNQAFTFHERSNAGLQSKTISTEQETN*MPKAIAITRYGESVKIINIIISTCLNL  3574

Range 3: 3262 to 3567 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
226.5 bits(491) 0.0 96/102(94%) 0/102(0%) Minus/Minus
Query       37  ERIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQNNAIISLSAQAFSSNCLEIVGAERSELIRRSLSTKDRMPAFRAKPSVLSKKPTECQKQLPSPGTEKVLK  342
                +RIPHRGHSLSPNFQLTSYSGVTTISLTWCR QNNAIIS SA AFSSNCLEIVGAERSEL RRSLSTKDRMPAFRA+PSVLSKKPTECQKQLPSPGTEKVLK
Subject   3262  QRIPHRGHSLSPNFQLTSYSGVTTISLTWCRTQNNAIISFSA*AFSSNCLEIVGAERSELTRRSLSTKDRMPAFRARPSVLSKKPTECQKQLPSPGTEKVLK  3567

Range 4: 3228 to 3566 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
216.4 bits(466) 0.0 101/113(89%) 0/113(0%) Minus/Minus
Query        3  KEFHIGATHFPQISNXXXXXXXXXXXLRGAGYKIMQSSHSRHKHSPPIV*K*LELKDLN**GAHSPQKIECRPSEQNHQY*ARNQLNAKSNCHHQVRRKC*NHQYHNQHMPQS  341
                KEFHI ATHFPQISN*LHILVL LSALRGAG+KIMQS H +H+HSPPIV*K*LELKDLN* G H P+KIECRPSEQ+HQY*ARNQLNAKSNCHHQVRRKC*NHQYHNQHMPQS
Subject   3228  KEFHIEATHFPQISN*LHILVLPLSALRGAGHKIMQSFHFQHRHSPPIV*K*LELKDLN*PGVHFPRKIECRPSEQDHQY*ARNQLNAKSNCHHQVRRKC*NHQYHNQHMPQS  3566

Range 5: 3226 to 3384 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
116.5 bits(248) 0.0 49/53(92%) 0/53(0%) Plus/Plus
Query        1  PD*GMC*L*Y**F*HFLRTW*WQLLLAFSWFLAQY*WFCSEGRHSIFCGE*AP  159
                PD*GMC*L*Y**F*HFLRTW*WQLLLAFSWFLAQY*W CSEGRHSIF G+* P
Subject   3226  PD*GMC*L*Y**F*HFLRTW*WQLLLAFSWFLAQY*WSCSEGRHSIFRGK*TP  3384

Range 6: 3421 to 3564 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.7 bits(209) 0.0 42/48(88%) 0/48(0%) Plus/Plus
Query      196  TIGGECLCRE*DDCIILYPAPRKADSSNTRI*S*LEIWGK*VAPMWNS  339
                TIGGECLC +*+DCIIL PAPRKADS NTRI*S*LEIWGK*VA MWNS
Subject   3421  TIGGECLC*K*NDCIILCPAPRKADSGNTRI*S*LEIWGK*VASMWNS  3564

Range 7: 3228 to 3566 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
165.6 bits(355) 0.0 101/113(89%) 0/113(0%) Plus/Plus
Query        3  RLRHVLIMILMILTLSPYLVMAIAFGIQXXXXXXXXXXXXRPAFDLLWRVSAXXXXXXXXXXXXNNWRRMLVPRVR*LHYFVSGTT*G****HQNMKLVGNLGKVSGPYVEFF  341
                RLRHVLIMILMILTLSPYLVMAIAFGIQLVSCSVLMVLL*RPAFDL W+V+A LVQIFQLQLFLNNWRRM + +++*LHYFVSGTT*G** *HQNMKLVGNLGKVSG YVEFF
Subject   3228  RLRHVLIMILMILTLSPYLVMAIAFGIQLVSCSVLMVLL*RPAFDLSWKVNAWLVQIFQLQLFLNNWRRMPMLKMK*LHYFVSGTT*G**W*HQNMKLVGNLGKVSGLYVEFF  3566

Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome

Sequence ID: JX559646.1 Length: 8726 Number of Matches: 7

Range 1: 3226 to 3564 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
271.9 bits(587) 0.0 109/113(96%) 0/113(0%) Plus/Plus
Query        2  QIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGFALKAGIRSFVESERLISSDLSAPTISKQLEENACAESEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGIL  340
                QIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGFALKAGIRSFVESERL+SSDLSAPTISKQLEENA AE+EMIALFCIRHHVRLIV+TPEYEVSWKFGESEWPLCGIL
Subject   3226  QIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGFALKAGIRSFVESERLVSSDLSAPTISKQLEENAYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGIL  3564

Range 2: 3226 to 3564 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
236.6 bits(510) 0.0 100/113(88%) 0/113(0%) Minus/Minus
Query        2  KNST*GPLTFPKFPTNFIFWCYYYQPYVVPDTK*CNHLTLGTSILLQLFRNSWS*KI*TNKALTLHKRSNAGLQSKTISTEQETN*MPKAIAITRYGESVKIINIIISTCLNL  340
                +NST*GPL FPKFPTNFIFWCY+YQPYVVPDTK*CNH   G SIL QLFRN WS*KI*TN+ALTLHKRSNAGLQSKTISTE ETN*MPKAIAITR+ ESVKIINIIISTCLNL
Subject   3226  QNST*GPLAFPKFPTNFIFWCYHYQPYVVPDTK*CNHFIFGISILFQLFRNGWS*KI*TNQALTLHKRSNAGLQSKTISTE*ETN*MPKAIAITRHRESVKIINIIISTCLNL  3564

Range 3: 3261 to 3572 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
223.3 bits(484) 0.0 95/104(91%) 0/104(0%) Minus/Minus
Query       37  LEERIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQNNAIISLSAQAFSSNCLEIVGAERSELIRRSLSTKDRMPAFRAKPSVLSKKPTECQKQLPSPGTEKVLK  348
                L  RIPHRGHSLSPNFQLTSYSGV TISLTWCRIQN+AIIS SA AFSSNCLE+VGAERSEL RRSLSTKDRMPAF+AKPSVLSKKPTECQKQLPSPGTEKVLK
Subject   3261  LRHRIPHRGHSLSPNFQLTSYSGVITISLTWCRIQNSAIISFSA*AFSSNCLEMVGAERSELTRRSLSTKDRMPAFKAKPSVLSKKPTECQKQLPSPGTEKVLK  3572

Range 4: 3227 to 3562 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
212.3 bits(457) 0.0 100/112(89%) 0/112(0%) Minus/Minus
Query        3  EFHIGATHFPQISNXXXXXXXXXXXLRGAGYKIMQSSHSRHKHSPPIV*K*LELKDLN**GAHSPQKIECRPSEQNHQY*ARNQLNAKSNCHHQVRRKC*NHQYHNQHMPQS  338
                EFHIGAT FPQISN*LHILVL LSALRGAGYKI+QS H RHKHS PIV*K LELKDLN* GAHSPQKIECRPS+QNHQY* RNQLNAKSNCHHQ +RKC*NHQYHNQHMPQS
Subject   3227  EFHIGATRFPQISN*LHILVLSLSALRGAGYKIVQSFHFRHKHSLPIV*KWLELKDLN*PGAHSPQKIECRPSKQNHQY*VRNQLNAKSNCHHQAQRKC*NHQYHNQHMPQS  3562

Range 5: 3225 to 3383 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.8 bits(253) 0.0 49/53(92%) 0/53(0%) Plus/Plus
Query        1  PD*GMC*L*Y**F*HFLRTW*WQLLLAFSWFLAQY*WFCSEGRHSIFCGE*AP  159
                PD*GMC*L*Y**F*HFL  W*WQLLLAFSWFL QY*WFC EGRHSIFCGE*AP
Subject   3225  PD*GMC*L*Y**F*HFLCAW*WQLLLAFSWFLTQY*WFCFEGRHSIFCGE*AP  3383

Range 6: 3420 to 3563 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
102.3 bits(217) 0.0 42/48(88%) 0/48(0%) Plus/Plus
Query      196  TIGGECLCRE*DDCIILYPAPRKADSSNTRI*S*LEIWGK*VAPMWNS  339
                TIG ECLCR+*+DC ILYPAPRKADS NTRI*S*LEIWGK VAPMWNS
Subject   3420  TIGRECLCRK*NDCTILYPAPRKADSDNTRI*S*LEIWGKRVAPMWNS  3563

Range 7: 3227 to 3562 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
171.1 bits(367) 0.0 101/112(90%) 0/112(0%) Plus/Plus
Query        3  RLRHVLIMILMILTLSPYLVMAIAFGIQXXXXXXXXXXXXRPAFDLLWRVSAXXXXXXXXXXXXNNWRRMLVPRVR*LHYFVSGTT*G****HQNMKLVGNLGKVSGPYVEF  338
                RLRHVLIMILMILTLS  LVMAIAFGIQLVS SVLMVLL*RPAFDLLWRVSA LVQIFQLQ FLNNW+RML+P+++*LHYFVSGTT*G****HQNMKLVGNLGK SGPYVEF
Subject   3227  RLRHVLIMILMILTLSLCLVMAIAFGIQLVSYSVLMVLL*RPAFDLLWRVSAWLVQIFQLQPFLNNWKRMLMPKMK*LHYFVSGTT*G****HQNMKLVGNLGKASGPYVEF  3562

Rupestris stem pitting associated virus strain SG1, complete genome

Sequence ID: AY881626.1 Length: 8742 Number of Matches: 7

Range 1: 3226 to 3564 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
269.6 bits(582) 0.0 108/113(96%) 0/113(0%) Plus/Plus
Query        2  QIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGFALKAGIRSFVESERLISSDLSAPTISKQLEENACAESEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGIL  340
                QIEACADYDIDDFN FSVPGDGNCFWHSVGFLLSTDGFALKAGIRSFVESERL+SSDLSAPTISKQLEENA AE+EMIALFCIRHHVRLIV+TPEYEVSWKFGESEWPLCGIL
Subject   3226  QIEACADYDIDDFNAFSVPGDGNCFWHSVGFLLSTDGFALKAGIRSFVESERLVSSDLSAPTISKQLEENAYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGIL  3564

Range 2: 3226 to 3564 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
238.9 bits(515) 0.0 101/113(89%) 0/113(0%) Minus/Minus
Query        2  KNST*GPLTFPKFPTNFIFWCYYYQPYVVPDTK*CNHLTLGTSILLQLFRNSWS*KI*TNKALTLHKRSNAGLQSKTISTEQETN*MPKAIAITRYGESVKIINIIISTCLNL  340
                +NST*GPL FPKFPTNFIFWCYYYQPYVVPDTK*CNH   G SIL QLFRN WS*KI*TN+ALTLHKRSNAGLQSKTISTE ETN*MPKAIAITR+ ESVKIINIIISTCLNL
Subject   3226  QNST*GPLAFPKFPTNFIFWCYYYQPYVVPDTK*CNHFIFGISILFQLFRNGWS*KI*TNQALTLHKRSNAGLQSKTISTE*ETN*MPKAIAITRHRESVKIINIIISTCLNL  3564

Range 3: 3261 to 3572 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
221.5 bits(480) 0.0 94/104(90%) 0/104(0%) Minus/Minus
Query       37  LEERIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQNNAIISLSAQAFSSNCLEIVGAERSELIRRSLSTKDRMPAFRAKPSVLSKKPTECQKQLPSPGTEKVLK  348
                L  RIPHRGHSLSPNFQLTSYSGV TISLTWCRIQN+AIIS SA AFSSNCLE+VGAERSEL RRSLSTKDRMPAF+AKPSVLSKKPTECQKQLPSPGTEK LK
Subject   3261  LRHRIPHRGHSLSPNFQLTSYSGVITISLTWCRIQNSAIISFSA*AFSSNCLEMVGAERSELTRRSLSTKDRMPAFKAKPSVLSKKPTECQKQLPSPGTEKALK  3572

Range 4: 3227 to 3562 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
206.8 bits(445) 0.0 100/112(89%) 0/112(0%) Minus/Minus
Query        3  EFHIGATHFPQISNXXXXXXXXXXXLRGAGYKIMQSSHSRHKHSPPIV*K*LELKDLN**GAHSPQKIECRPSEQNHQY*ARNQLNAKSNCHHQVRRKC*NHQYHNQHMPQS  338
                EFHIGAT FPQISN*LHILVLLLSALRGAGYKI+QS H RHKHS PIV*K LELKDLN* GAHSPQKIECRPS+QNHQY* RNQLNAKSNCHHQ +RK *NHQYHNQHMPQS
Subject   3227  EFHIGATRFPQISN*LHILVLLLSALRGAGYKIVQSFHFRHKHSLPIV*KWLELKDLN*PGAHSPQKIECRPSKQNHQY*VRNQLNAKSNCHHQAQRKR*NHQYHNQHMPQS  3562

Range 5: 3225 to 3383 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
115.2 bits(245) 0.0 48/53(91%) 0/53(0%) Plus/Plus
Query        1  PD*GMC*L*Y**F*HFLRTW*WQLLLAFSWFLAQY*WFCSEGRHSIFCGE*AP  159
                PD*GMC*L*Y**F* FL  W*WQLLLAFSWFL QY*WFC EGRHSIFCGE*AP
Subject   3225  PD*GMC*L*Y**F*RFLCAW*WQLLLAFSWFLTQY*WFCFEGRHSIFCGE*AP  3383

Range 6: 3420 to 3563 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
102.8 bits(218) 0.0 42/48(88%) 0/48(0%) Plus/Plus
Query      196  TIGGECLCRE*DDCIILYPAPRKADSSNTRI*S*LEIWGK*VAPMWNS  339
                TIG ECLCR+*+DC ILYPAPRKADS+NTRI*S*LEIWGK VAPMWNS
Subject   3420  TIGRECLCRK*NDCTILYPAPRKADSNNTRI*S*LEIWGKRVAPMWNS  3563

Range 7: 3227 to 3562 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
171.1 bits(367) 0.0 101/112(90%) 0/112(0%) Plus/Plus
Query        3  RLRHVLIMILMILTLSPYLVMAIAFGIQXXXXXXXXXXXXRPAFDLLWRVSAXXXXXXXXXXXXNNWRRMLVPRVR*LHYFVSGTT*G****HQNMKLVGNLGKVSGPYVEF  338
                RLRHVLIMILMILTLS  LVMAIAFGIQLVS SVLMVLL*RPAFDLLWRVSA LVQIFQLQ FLNNW+RML+P+++*LHYFVSGTT*G****HQNMKLVGNLGK SGPYVEF
Subject   3227  RLRHVLIMILMILTLSLCLVMAIAFGIQLVSYSVLMVLL*RPAFDLLWRVSAWLVQIFQLQPFLNNWKRMLMPKMK*LHYFVSGTT*G****HQNMKLVGNLGKASGPYVEF  3562