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Queries

Nucleotide Sequence (628 letters)

Query ID:ds2016-57_12
Query definition:No definition line
Query length:638
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 8 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
63
126
189
252
315
378
441
504
567
628

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 11

Range 1: 4036 to 4662 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
494.1 bits(1072) 0.0 208/209(100%) 0/209(0%) Plus/Plus
Query        1  ISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAPF  627
                ISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYA F
Subject   4036  ISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAIF  4662

Range 2: 4038 to 4661 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
442.3 bits(959) 0.0 207/208(100%) 0/208(0%) Minus/Minus
Query        3  KGA*SAKAAVMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSNLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHXXXXXXXXXIEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSL  626
                K A*SAKAAVMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSNLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHSSSISRSLLIEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSL
Subject   4038  KMA*SAKAAVMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSNLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHSSSISRSLLIEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSL  4661

Range 3: 4278 to 4661 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
272.8 bits(589) 0.0 120/128(94%) 0/128(0%) Plus/Plus
Query      243  RQIKEGGLGCRYL*SLP*ESYRPKGWSLRDF**SSAIPSWLHRSMSSCYSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEVARRKVI*VQLGEPEVCKSDV*FKITL*LQKGLHDCRFC*LRPF  626
                RQIKEGGLGC YL*SLP*ESYRPKGWSLRD **SSAIPSWLHRSMSSCY Q*RFHLSCW*SLSKHI*FSKR*SYFGC TE*HIEVARRKVI*VQLGEP+VCKS+V*FKITL*LQK LHDCRFC*LR F
Subject   4278  RQIKEGGLGCCYL*SLP*ESYRPKGWSLRDL**SSAIPSWLHRSMSSCYPQ*RFHLSCW*SLSKHI*FSKR*SYFGCRTE*HIEVARRKVI*VQLGEPKVCKSNV*FKITL*LQKRLHDCRFC*LRHF  4661

Range 4: 4038 to 4238 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
160.1 bits(343) 0.0 66/67(99%) 0/67(0%) Plus/Plus
Query        3  K**EI*RFKALACWSVNF*HQTKRIDSCAWNIWGWKEFPIQELHEEI*RKICNICLT*AGSSKFNQK  203
                K**EI*RFKALACWSVNF*HQTKRIDSCAW IWGWKEFPIQELHEEI*RKICNICLT*AGSSKFNQK
Subject   4038  K**EI*RFKALACWSVNF*HQTKRIDSCAWYIWGWKEFPIQELHEEI*RKICNICLT*AGSSKFNQK  4238

Range 5: 4300 to 4662 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
253.1 bits(546) 0.0 112/121(93%) 0/121(0%) Minus/Minus
Query      265  KRGVISKSGSHGALFEVTG*S*IKHRIYKPPALQVVPI*LSFEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*IDVTRRE*LNFIKNHAMTSL*ACNFPKEDFKGNDIP  627
                + GVISKSGSHGA FEVTG*S*IKH IYKP ALQVVPI*LSFEQPQYVTLF TQNSSIFLRIICALTRITSKRDESVTA+NKKT*IDVTRRE*LNFIK+HAMTSL*ACNFPKEDFKGN+IP
Subject   4300  ENGVISKSGSHGAFFEVTG*S*IKHWIYKPSALQVVPI*LSFEQPQYVTLFGTQNSSIFLRIICALTRITSKRDESVTADNKKT*IDVTRRE*LNFIKDHAMTSL*ACNFPKEDFKGNNIP  4662

Range 6: 4036 to 4254 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
166.5 bits(357) 0.0 71/73(97%) 0/73(0%) Minus/Minus
Query        1  IHFQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCSKHNCQFSLFDVRS*HSSKPRL*IVKFLITY  219
                IHF VPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKC+KHNCQFSLFDVRS*HSSKPRL*IVKFLITY
Subject   4036  IHF*VPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCTKHNCQFSLFDVRS*HSSKPRL*IVKFLITY  4254

Range 7: 4349 to 4660 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
237.5 bits(512) 0.0 97/104(93%) 0/104(0%) Minus/Minus
Query      314  KGRNQQKRQSWSPF*SYRVILNQTSDLQTSGSPSCTYMTFLRATSICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQEGIAELHQKSRNDQP  625
                K RNQQKRQSWS F*SYRVILNQT DLQT GSPSCTYMTFLRATSICHSV+HPK*LYLFENHMCFDKDHQQER*KRHC *QEDIDRCNQEGIAELHQ+SRNDQP
Subject   4349  KWRNQQKRQSWSLF*SYRVILNQTLDLQTFGSPSCTYMTFLRATSICHSVRHPK*LYLFENHMCFDKDHQQER*KRHCG*QEDIDRCNQEGIAELHQRSRNDQP  4660

Range 8: 4037 to 4318 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
158.2 bits(339) 0.0 91/94(97%) 0/94(0%) Minus/Minus
Query        2  QR*RHXXXXXXXXXXXXPYTLHPFPGPF*LNLLEPA*VRQMLQIFLQIXXXXSCIGNSFQPQMFQAQLSILFV*CQKLTLQQAKALNR*ISHHL  283
                QR*+HPSPPSLICLPSPPYTLHPF GPF*LNLLEPA*VRQMLQIFLQISS*SSCIGNSFQPQM+QAQLSILFV*CQKLTLQQAKALNR*ISHHL
Subject   4037  QR*QHPSPPSLICLPSPPYTLHPFLGPF*LNLLEPA*VRQMLQIFLQISS*SSCIGNSFQPQMYQAQLSILFV*CQKLTLQQAKALNR*ISHHL  4318

Range 9: 4466 to 4627 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
122.0 bits(260) 0.0 50/54(93%) 0/54(0%) Plus/Plus
Query      431  KAHMILKKIELFWVLNRVTY*GCSKESHIGTTWRAGGL*IRCLIQDYPVTSKRA  592
                KAHMILKKIELFWV NRVTY*GCSKESHIGTTWRA GL*I+CLIQDYPVTSK+A
Subject   4466  KAHMILKKIELFWVPNRVTY*GCSKESHIGTTWRAEGL*IQCLIQDYPVTSKKA  4627

Range 10: 4037 to 4189 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
111.5 bits(237) 0.0 50/51(98%) 0/51(0%) Plus/Plus
Query        2  *VMRNLTIQSLGLLECQLLTSNKEN*QLCLEHLGLERVSYTRAS*RDLKEN  154
                *VMRNLTIQSLGLLECQLLTSNKEN*QLCL HLGLERVSYTRAS*RDLKEN
Subject   4037  *VMRNLTIQSLGLLECQLLTSNKEN*QLCLVHLGLERVSYTRAS*RDLKEN  4189

Range 11: 4223 to 4411 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
95.5 bits(202) 0.0 60/63(95%) 0/63(0%) Plus/Plus
Query      188  QIQSKGTWKWMKSVXXXXXXXXXXXXGMSLPLKSSLGKLQA*RLVIA*FLMKFSYSLLVTSIY  376
                QIQSKGT KWMKSVRW*RQANQRRRAGM LPLKSSLGKLQA*RLVIA* LMKFSYSLLVTSIY
Subject   4223  QIQSKGT*KWMKSVRW*RQANQRRRAGMLLPLKSSLGKLQA*RLVIA*SLMKFSYSLLVTSIY  4411

Grapevine rupestris stem pitting associated virus isolate Tannat Rspav1, complete genome

Sequence ID: KR528585.1 Length: 8595 Number of Matches: 11

Range 1: 4018 to 4644 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
489.5 bits(1062) 0.0 206/209(99%) 0/209(0%) Plus/Plus
Query        1  ISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAPF  627
                ISDEKFNDS+PWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDE CKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYA F
Subject   4018  ISDEKFNDSRPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEGCKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAIF  4644

Range 2: 4020 to 4643 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
433.6 bits(940) 0.0 202/208(97%) 0/208(0%) Minus/Minus
Query        3  KGA*SAKAAVMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSNLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHXXXXXXXXXIEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSL  626
                K A*SAKAAVMEPFLKLQG+LESNIGFTNLRLSKLYLYDFPSS+LNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLH SSISRSLLIEFA+ARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQG ESLNFSSL
Subject   4020  KMA*SAKAAVMEPFLKLQGSLESNIGFTNLRLSKLYLYDFPSSSLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHPSSISRSLLIEFAKARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGLESLNFSSL  4643

Range 3: 4282 to 4644 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
252.6 bits(545) 0.0 111/121(92%) 0/121(0%) Minus/Minus
Query      265  KRGVISKSGSHGALFEVTG*S*IKHRIYKPPALQVVPI*LSFEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*IDVTRRE*LNFIKNHAMTSL*ACNFPKEDFKGNDIP  627
                K GVISKSGSHGA FEVTG*S*IKHRIY+PPALQVVPI*L FEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*IDVTR E*LNFIK+HAMTSL*ACNFPK++FKG++IP
Subject   4282  KNGVISKSGSHGAFFEVTG*S*IKHRIYEPPALQVVPI*LPFEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*IDVTRGE*LNFIKDHAMTSL*ACNFPKKNFKGDNIP  4644

Range 4: 4018 to 4236 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
153.2 bits(328) 0.0 64/73(88%) 0/73(0%) Minus/Minus
Query        1  IHFQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCSKHNCQFSLFDVRS*HSSKPRL*IVKFLITY  219
                IH QVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKC+K+NCQFSLF+V S*HSSKPR *I+KFL+ Y
Subject   4018  IHLQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCTKYNCQFSLFNVGS*HSSKPRP*IIKFLVAY  4236

Range 5: 4260 to 4643 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
260.0 bits(561) 0.0 116/128(91%) 0/128(0%) Plus/Plus
Query      243  RQIKEGGLGCRYL*SLP*ESYRPKGWSLRDF**SSAIPSWLHRSMSSCYSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEVARRKVI*VQLGEPEVCKSDV*FKITL*LQKGLHDCRFC*LRPF  626
                RQIKEGGLGC +L*S  *ESYRPKGWSLRD **SSAIP WLHRSMSSCYSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIE ARR+VI*VQLGEPEV KSDV*FK TL*LQK LHDCRFC*LR F
Subject   4260  RQIKEGGLGCCHL*SFS*ESYRPKGWSLRDL**SSAIPPWLHRSMSSCYSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEAARREVI*VQLGEPEVRKSDV*FKTTL*LQKRLHDCRFC*LRHF  4643

Range 6: 4029 to 4220 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
141.7 bits(303) 0.0 58/64(91%) 0/64(0%) Plus/Plus
Query       12  EI*RFKALACWSVNF*HQTKRIDSCAWNIWGWKEFPIQELHEEI*RKICNICLT*AGSSKFNQK  203
                EI* FKALACWSVNF H TKRIDSC W IWGWKEFPIQELHEEI*RKICNICLT*AG SKFNQK
Subject   4029  EI**FKALACWSVNFRH*TKRIDSCTWYIWGWKEFPIQELHEEI*RKICNICLT*AGFSKFNQK  4220

Range 7: 4331 to 4645 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
238.9 bits(515) 0.0 97/105(92%) 0/105(0%) Minus/Minus
Query      314  EKGRNQQKRQSWSPF*SYRVILNQTSDLQTSGSPSCTYMTFLRATSICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQEGIAELHQKSRNDQP  628
                EK RNQQKRQSWS F*SYRV+LNQTSDL+TSGSPSCTYMT LRA SICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQ GIAELHQ+SRNDQP
Subject   4331  EKWRNQQKRQSWSLF*SYRVVLNQTSDLRTSGSPSCTYMTSLRAASICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQGGIAELHQRSRNDQP  4645

Range 8: 4019 to 4300 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
140.8 bits(301) 0.0 84/94(89%) 0/94(0%) Minus/Minus
Query        2  QR*RHXXXXXXXXXXXXPYTLHPFPGPF*LNLLEPA*VRQMLQIFLQIXXXXSCIGNSFQPQMFQAQLSILFV*CQKLTLQQAKALNR*ISHHL  283
                QR*+HPSPPSLICLPSPPYT HP PGPF*LNLL+PA*VRQMLQIFLQISS*SSCIGNSFQPQM+Q QLSILFV*C+KLTLQQAKALN *IS  L
Subject   4019  QR*QHPSPPSLICLPSPPYTPHPSPGPF*LNLLKPA*VRQMLQIFLQISS*SSCIGNSFQPQMYQVQLSILFV*CRKLTLQQAKALNH*ISRRL  4300

Range 9: 4448 to 4609 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
124.8 bits(266) 0.0 51/54(94%) 0/54(0%) Plus/Plus
Query      431  KAHMILKKIELFWVLNRVTY*GCSKESHIGTTWRAGGL*IRCLIQDYPVTSKRA  592
                KAHMILKKIELFWVLNRVTY*GCSK SHIGTTWRAGG *IRCLIQDYPVTSK+A
Subject   4448  KAHMILKKIELFWVLNRVTY*GCSKGSHIGTTWRAGGS*IRCLIQDYPVTSKKA  4609

Range 10: 4028 to 4171 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.3 bits(193) 0.0 42/48(88%) 0/48(0%) Plus/Plus
Query       11  RNLTIQSLGLLECQLLTSNKEN*QLCLEHLGLERVSYTRAS*RDLKEN  154
                RNL IQ LGLLECQL T NKEN*QL L HLGLERVSYTRAS*RDLKEN
Subject   4028  RNLMIQGLGLLECQLPTLNKEN*QLYLVHLGLERVSYTRAS*RDLKEN  4171

Range 11: 4205 to 4393 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
86.3 bits(182) 0.0 54/63(86%) 0/63(0%) Plus/Plus
Query      188  QIQSKGTWKWMKSVXXXXXXXXXXXXGMSLPLKSSLGKLQA*RLVIA*FLMKFSYSLLVTSIY  376
                QIQSKGTW+WM+ VRW*RQANQRRRAGM  PLK  LGKLQA*RLVIA* LMKFSYS LVTSIY
Subject   4205  QIQSKGTWRWMRGVRW*RQANQRRRAGMLSPLKFFLGKLQA*RLVIA*SLMKFSYSPLVTSIY  4393

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 12

Range 1: 4036 to 4662 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
487.2 bits(1057) 0.0 205/209(98%) 0/209(0%) Plus/Plus
Query        1  ISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAPF  627
                ISDEKFNDSKPWLAGVSTS IKQRELTVVLGTFGAGKSFL+KSFMKRSEGKFVTFVSPRRALANSIKRDLEMD+ECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYA F
Subject   4036  ISDEKFNDSKPWLAGVSTSGIKQRELTVVLGTFGAGKSFLHKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAIF  4662

Range 2: 4038 to 4661 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
428.6 bits(929) 0.0 201/208(97%) 0/208(0%) Minus/Minus
Query        3  KGA*SAKAAVMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSNLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHXXXXXXXXXIEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSL  626
                K A*SAKAAVM+PFLKLQGNLESNIGFTNLRLSKLYLYDFPSS+LNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLR+TRRHRSM*PGGNS TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHSSSISRSLLIEFARARLGETNVTNFPSDLFMKLL RKLFPAPNVPSTTVNSLCLM EVDTPASQGFESLNFSSL
Subject   4038  KMA*SAKAAVMDPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSSLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRMTRRHRSM*PGGNSWTSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHSSSISRSLLIEFARARLGETNVTNFPSDLFMKLLCRKLFPAPNVPSTTVNSLCLMPEVDTPASQGFESLNFSSL  4661

Range 3: 4278 to 4661 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
262.7 bits(567) 0.0 116/128(91%) 0/128(0%) Plus/Plus
Query      243  RQIKEGGLGCRYL*SLP*ESYRPKGWSLRDF**SSAIPSWLHRSMSSCYSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEVARRKVI*VQLGEPEVCKSDV*FKITL*LQKGLHDCRFC*LRPF  626
                RQIKEGGLGCRYL*SL *ESYRPKGWSLRD **S AIP WLHRSMSSC+SQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIE ARR+VI*VQLGEPEV KS+V*FKITL*LQKG+HDCR C*LR F
Subject   4278  RQIKEGGLGCRYL*SLS*ESYRPKGWSLRDL**SPAIPPWLHRSMSSCHSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEAARREVI*VQLGEPEVRKSNV*FKITL*LQKGVHDCRLC*LRHF  4661

Range 4: 4038 to 4238 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
147.7 bits(316) 0.0 62/67(93%) 0/67(0%) Plus/Plus
Query        3  K**EI*RFKALACWSVNF*HQTKRIDSCAWNIWGWKEFPIQELHEEI*RKICNICLT*AGSSKFNQK  203
                K**EI*RFKALACWSV F HQTKRIDS AW+IWGWKEFP QELHEEI*RKICNICLT*AGSSKFNQK
Subject   4038  K**EI*RFKALACWSVYFWHQTKRIDSRAWHIWGWKEFPTQELHEEI*RKICNICLT*AGSSKFNQK  4238

Range 5: 4223 to 4264 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.3 bits(73) 0.0 13/14(93%) 0/14(0%) Plus/Plus
Query      188  QIQSKGTWKWMKSV  229
                QIQSKGTWKWM SV
Subject   4223  QIQSKGTWKWMMSV  4264

Range 6: 4300 to 4662 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
247.1 bits(533) 0.0 109/121(90%) 0/121(0%) Minus/Minus
Query      265  KRGVISKSGSHGALFEVTG*S*IKHRIYKPPALQVVPI*LSFEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*IDVTRRE*LNFIKNHAMTSL*ACNFPKEDFKGNDIP  627
                + GVISK GSHG LFEVTG*S*IKH IY+PPALQVVPI*L FEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTAN+KKT*IDVTR E*L+FIK+HAMTSL*ACNFPK+DFKGNDIP
Subject   4300  ENGVISKGGSHGPLFEVTG*S*IKHWIYEPPALQVVPI*LPFEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANDKKT*IDVTRGE*LDFIKDHAMTSL*ACNFPKKDFKGNDIP  4662

Range 7: 4036 to 4254 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
164.2 bits(352) 0.0 69/73(95%) 0/73(0%) Minus/Minus
Query        1  IHFQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCSKHNCQFSLFDVRS*HSSKPRL*IVKFLITY  219
                IHFQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKC+KH+CQFSLFD RS HSSKPRL*IVKFLITY
Subject   4036  IHFQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCAKHDCQFSLFDARSRHSSKPRL*IVKFLITY  4254

Range 8: 4349 to 4660 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
232.9 bits(502) 0.0 94/104(90%) 0/104(0%) Minus/Minus
Query      314  KGRNQQKRQSWSPF*SYRVILNQTSDLQTSGSPSCTYMTFLRATSICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQEGIAELHQKSRNDQP  625
                K RNQQ+RQSW+PF*SYRVILNQT DL+TSGSPSCTYMT LRA SICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQ GIA LHQ+SRNDQP
Subject   4349  KWRNQQRRQSWTPF*SYRVILNQTLDLRTSGSPSCTYMTSLRAASICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQGGIAGLHQRSRNDQP  4660

Range 9: 4037 to 4318 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
153.2 bits(328) 0.0 88/94(94%) 0/94(0%) Minus/Minus
Query        2  QR*RHXXXXXXXXXXXXPYTLHPFPGPF*LNLLEPA*VRQMLQIFLQIXXXXSCIGNSFQPQMFQAQLSILFV*CQKLTLQQAKALNR*ISHHL  283
                QR*RHPSPPSLICLPS PYT HPFPGPF*LNLLEPA*VRQMLQIFLQISS*SSC+GNSFQPQM QA+LSILFV*CQK TLQQAKALNR*ISHHL
Subject   4037  QR*RHPSPPSLICLPSLPYTHHPFPGPF*LNLLEPA*VRQMLQIFLQISS*SSCVGNSFQPQMCQARLSILFV*CQK*TLQQAKALNR*ISHHL  4318

Range 10: 4466 to 4624 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
122.5 bits(261) 0.0 50/53(94%) 0/53(0%) Plus/Plus
Query      431  KAHMILKKIELFWVLNRVTY*GCSKESHIGTTWRAGGL*IRCLIQDYPVTSKR  589
                KAHMILKKIELFWVLNRVTY*GCSK SHIGTTWRAGG *I+CLIQDYPVTSKR
Subject   4466  KAHMILKKIELFWVLNRVTY*GCSKGSHIGTTWRAGGS*IQCLIQDYPVTSKR  4624

Range 11: 4037 to 4189 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
103.7 bits(220) 0.0 47/51(92%) 0/51(0%) Plus/Plus
Query        2  *VMRNLTIQSLGLLECQLLTSNKEN*QLCLEHLGLERVSYTRAS*RDLKEN  154
                *VMRNLTIQSLGLLEC LL SNKEN*Q CL HLGLERVSYTRAS*RDLKEN
Subject   4037  *VMRNLTIQSLGLLECLLLASNKEN*QSCLAHLGLERVSYTRAS*RDLKEN  4189

Range 12: 4301 to 4411 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
66.1 bits(138) 0.0 33/37(89%) 0/37(0%) Plus/Plus
Query      266  GMSLPLKSSLGKLQA*RLVIA*FLMKFSYSLLVTSIY  376
                GMSLPLKS LGKLQA*RLVIA* LMK SYS LVTSIY
Subject   4301  GMSLPLKSFLGKLQA*RLVIA*SLMKSSYSPLVTSIY  4411

Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome

Sequence ID: KR054734.1 Length: 8753 Number of Matches: 12

Range 1: 4036 to 4662 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
472.1 bits(1024) 0.0 195/209(93%) 0/209(0%) Plus/Plus
Query        1  ISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAPF  627
                ISDEKFNDSKPWL+G+STSDIK RELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMD+ CKV KAGKSKKEGWDVVTFEVFLRK+  LKAGHCVIFDEVQLFPPGYIDLCLL IRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYN+ESRRFVNPMF+SRLPC+FKKGSMTAAFADYA F
Subject   4036  ISDEKFNDSKPWLSGISTSDIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKIANLKAGHCVIFDEVQLFPPGYIDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIF  4662

Range 2: 4038 to 4661 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
341.1 bits(738) 0.0 167/208(80%) 0/208(0%) Minus/Minus
Query        3  KGA*SAKAAVMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSNLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHXXXXXXXXXIEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSL  626
                K A*SA AAVMEPFLK  G+L+SNIGFTNLRLS LYL D PSSNLN+SLCSAP IA SF ESYVL*QGSPAREMKASLR+  R RS+*PGGNS*TSSK+TQ PAFR   FLR TSKVTTSQPSFFDLPAF TL  SSIS+SLLIEFARA LGET VTN PSDLF+KLLYRKL PAP VPSTTVNS  L+SEVD P S G ESLNFSSL
Subject   4038  KIA*SANAAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVL*QGSPAREMKASLRMVNRQRSI*PGGNS*TSSKMTQWPAFRFAIFLRNTSKVTTSQPSFFDLPAFATLQLSSISKSLLIEFARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLISEVDIPESHGLESLNFSSL  4661

Range 3: 4300 to 4653 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
143.1 bits(306) 0.0 63/118(53%) 0/118(0%) Minus/Minus
Query      265  VISKSGSHGALFEVTG*S*IKHRIYKPPALQVVPI*LSFEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*IDVTRRE*LNFIKNHAMTSL*ACNFPKEDFKGNDIP  618
                +ISK  SHGAL E+T  S +KH I+KPP L VVP+ L+ +  QY+TL S+Q  +I L +ICALT ITSKR+ES+T+   +T +++  RE LN IKN AM  L  CNFPK+ FKG+++P
Subject   4300  IISKCCSHGALLEMTWQSGLKHWIHKPPTLNVVPVGLTLK*SQYITLLSSQYCAILLGVICALTGITSKRNESITSYG*QTKVNIAWREQLNLIKNDAMACLQVCNFPKKHFKGHNVP  4653

Range 4: 4036 to 4254 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.7 bits(209) 0.0 45/73(62%) 0/73(0%) Minus/Minus
Query        1  IHFQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCSKHNCQFSLFDVRS*HSSKPRL*IVKFLITY  219
                IHFQV F+*IC*SP  *+K Y+F+FR LH+ALV +  +S K +KH+CQ S FD+RS*+S +P L IVK LITY
Subject   4036  IHFQVSFN*IC*SPSG*NKGYEFAFRPLHKALVQKAFTSSKGAKHDCQLSRFDIRS*YS*EPWLGIVKLLITY  4254

Range 5: 4281 to 4652 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
111.5 bits(237) 0.0 62/124(50%) 0/124(0%) Plus/Plus
Query      246  QIKEGGLGCRYL*SLP*ESYRPKGWSLRDF**SSAIPSWLHRSMSSCYSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEVARRKVI*VQLGEPEVCKSDV*FKITL*LQKGLHDCRFC*L  617
                QIK+  LG   L*S+ *E+ +P+G  LR F** S +PS L+  +S  +++* FH SCW*SLSKHI*  K     G * E*+IE+    V+ VQ  E EVC+S+V* +  +  Q+GLHDC  C*L
Subject   4281  QIKKRRLGRCDL*SVS*ENCKPEGRPLRHF**GSTVPSRLY*PLSVNHTK*CFHFSCW*SLSKHI*LPKGSRNTGS*AE*YIEIT*G*VLQVQH*ESEVCESNV*VQTAMSFQEGLHDCSIC*L  4652

Range 6: 4038 to 4238 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
93.2 bits(197) 0.0 38/67(57%) 0/67(0%) Plus/Plus
Query        3  K**EI*RFKALACWSVNF*HQTKRIDSCAWNIWGWKEFPIQELHEEI*RKICNICLT*AGSSKFNQK  203
                K**E+*RF+A+A  ++NF*+Q  R+DS AW++W W +  +QEL+EE+*R+I N+C T  GSSKFN K
Subject   4038  K**EV*RFQAMALRNINF*YQISRVDSRAWHLWSW*KLSVQELYEEV*RQIRNLCFTQKGSSKFN*K  4238

Range 7: 4223 to 4255 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
26.7 bits(52) 0.0 9/11(82%) 0/11(0%) Plus/Plus
Query      188  QIQSKGTWKWM  220
                QIQ K TWKWM
Subject   4223  QIQLKETWKWM  4255

Range 8: 4349 to 4651 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
100.5 bits(213) 0.0 49/101(49%) 0/101(0%) Minus/Minus
Query      314  NQQKRQSWSPF*SYRVILNQTSDLQTSGSPSCTYMTFLRATSICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQEGIAELHQKSRNDQP  616
                NQQ  QSWSP *+   +  QT D QTS S  CT  T+ +  SI HS Q P     F +HMCFD+DHQQE+*K H     D  + + EG  E HQK RN  P
Subject   4349  NQQMLQSWSPS*NDMAVWTQTLDSQTSDSQCCTCRTYPQVISIYHSAQLPVLRDPFGSHMCFDRDHQQEK*KHHFVWLTDKGQYSLEGTVEPHQK*RNGLP  4651

Range 9: 4037 to 4255 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
74.8 bits(157) 0.0 44/73(60%) 0/73(0%) Minus/Minus
Query        2  HPFPGPF*LNLLEPA*VRQMLQIFLQIXXXXSCIGNSFQPQMFQAQLSILFV*CQKLTLQQAKALNR*ISHHL  220
                HPFP  F*LNLLEP  V+Q L+I LQ SS*SSC  + +Q Q  QA+LS L +* QKL   +A A NR* SHHL
Subject   4037  HPFPSLF*LNLLEPFWVKQRLRICLQTSS*SSCTESFYQLQRCQARLSTLEI*YQKLIFLRAMAWNR*TSHHL  4255

Range 10: 4466 to 4627 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
60.6 bits(126) 0.0 29/54(54%) 0/54(0%) Plus/Plus
Query      431  KAHMILKKIELFWVLNRVTY*GCSKESHIGTTWRAGGL*IRCLIQDYPVTSKRA  592
                KAHM  K+I  +W L+RV Y*   + S  GTT R GGL*I+CL  D  V S+RA
Subject   4466  KAHMTPKRIAQYWELSRVIY*DYLRVSPTGTTLRVGGL*IQCLSPDCHVISRRA  4627

Range 11: 4037 to 4189 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.9 bits(107) 0.0 30/51(59%) 0/51(0%) Plus/Plus
Query        2  *VMRNLTIQSLGLLECQLLTSNKEN*QLCLEHLGLERVSYTRAS*RDLKEN  154
                *VMR+LTI S G  E QLL SN E+*Q CL  L L +   TRA *R LK N
Subject   4037  *VMRSLTIPSHGSQEYQLLISNLES*QSCLAPLELVKAFCTRAL*RGLKAN  4189

Range 12: 4313 to 4393 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.3 bits(75) 0.0 18/27(67%) 0/27(0%) Plus/Plus
Query      278  PLKSSLGKLQA*RLVIA*FLMKFSYSL  358
                PLK  LGKLQ *R  IA FLM+F+ SL
Subject   4313  PLKCFLGKLQT*RQAIASFLMRFNCSL  4393

Grapevine rupestris stem pitting associated virus isolate GRSPaV LSL, complete genome

Sequence ID: KR054735.1 Length: 8754 Number of Matches: 11

Range 1: 4036 to 4662 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
470.7 bits(1021) 0.0 193/209(92%) 0/209(0%) Plus/Plus
Query        1  ISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAPF  627
                ISDEKFNDSKPWL+G+ST DIK RELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMD++CKV KAGKSKKEGWDVVTFEVFLRKV GLKAGHC+IFDEVQLFPPGYIDLCLL IRSDAFISLAGDPCQSTYDSQKDRAILG+EQSDIL+LLEGK+YRYNLESRRFVNPMF+SRLPCNFKKGSMTAAF+DYA F
Subject   4036  ISDEKFNDSKPWLSGISTKDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDDCKVAKAGKSKKEGWDVVTFEVFLRKVDGLKAGHCIIFDEVQLFPPGYIDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGSEQSDILKLLEGKAYRYNLESRRFVNPMFESRLPCNFKKGSMTAAFSDYAIF  4662

Range 2: 4038 to 4661 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
332.8 bits(720) 0.0 165/208(79%) 0/208(0%) Minus/Minus
Query        3  KGA*SAKAAVMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSNLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHXXXXXXXXXIEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSL  626
                K A*S KAAVMEPFLKL G+L+SNIGFTNL LSKLYL   PS+N NMSLCS PKIA SF*ES VL  GSPAR+MKASLRI  +H+SM*PGGNS*TSSK+ Q PAF+P TFLR TSKVTTS PSF DLPAF TL SSSISRSLLIE A+ARLGET VTNFPSDLFMKLL RKLFPAP VPSTTVNSL  +S VD P S GFESLNFSSL
Subject   4038  KIA*SEKAAVMEPFLKLHGSLDSNIGFTNLLLSKLYL*ALPSNNFNMSLCSDPKIARSF*ES*VLWHGSPARDMKASLRIVSKHKSM*PGGNS*TSSKMIQWPAFKPSTFLRNTSKVTTSHPSFLDLPAFATLQSSSISRSLLIELAKARLGETKVTNFPSDLFMKLL*RKLFPAPKVPSTTVNSLGFISFVDIPESHGFESLNFSSL  4661

Range 3: 4036 to 4662 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
167.4 bits(359) 0.0 93/209(44%) 0/209(0%) Minus/Minus
Query        1  KRGVISKSGSHGALFEVTG*S*IKHRIYKPPALQVVPI*LSFEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*IDVTRRE*LNFIKNHAMTSL*ACNFPKEDFKGNDIPXXXXXXXXXXXXXXFIHFQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCSKHNCQFSLFDVRS*HSSKPRL*IVKFLITY  627
                K  ++ +   HGA  ++    * KH I+KPP LQVV +  + +   YVTL  +Q+ +IFLRII  L  +TSKR E +TAN ++T*I+VTR E*LN +KN  +  L   N P++  K   IP+L L FA   HLT+ IHFQ+ FD*+ *S    ++  K S    HEALV ET S PK  +HNCQ S   +   +S +P L*I++  I Y
Subject   4036  KDSIVREGRRHGAFLKIAWQP*FKHWIHKPPTLQVVSVSFTLQ*F*YVTLLRSQDCAIFLRIISTLAWVTSKRYEGITANCEQT*INVTRGE*LNLVKNDTVACLQTINLPEKHLKSYHIPSLFLRFASFCHLTIIIHFQISFD*VG*SSSWGNESNKLSL*PFHEALVKETFSCPKSPEHNCQLSWLYIFRGYSGEPWL*IIELFIAY  4662

Range 4: 4281 to 4634 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
89.5 bits(189) 0.0 51/118(43%) 0/118(0%) Plus/Plus
Query      246  QIKEGGLGCRYL*SLP*ESYRPKGWSLRDF**SSAIPSWLHRSMSSCYSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEVARRKVI*VQLGEPEVCKSDV*FKITL*LQKGLHD  599
                QI E G+GC   * +  E    +G  L  F*  SAIP WLH  M +  SQ*  H+SCW* + K++*FS+R    G   +*HI++     + +QLGE EVC+S+V* K  +   + LHD
Subject   4281  QI*ERGMGCGNF*GVSQEG*WFEGRPLYHF*RGSAIPPWLH*FMFAHNSQ*CLHISCW*PMPKYL*FSERSRNLGIGAK*HIKIIGG*SLQIQLGE*EVCESNV*IKAAMQF*ERLHD  4634

Range 5: 4059 to 4238 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
66.1 bits(138) 0.0 26/60(43%) 0/60(0%) Plus/Plus
Query       24  FKALACWSVNF*HQTKRIDSCAWNIWGWKEFPIQELHEEI*RKICNICLT*AGSSKFNQK  203
                FKA+A  +++  ++ KR+DSCA + WG K+FP+QELHE++  K+C         S+ NQK
Subject   4059  FKAMALRNIHERYKAKRVDSCARDFWGRKKFPLQELHEKVRGKVCYFRFPKTSFSQLNQK  4238

Range 6: 4367 to 4663 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
85.8 bits(181) 0.0 44/99(44%) 0/99(0%) Minus/Minus
Query      332  EKGRNQQKRQSWSPF*SYRVILNQTSDLQTSGSPSCTYMTFLRATSICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQEGIAELHQK  628
                E+  +Q++  SWS  *+    L QT D QTS SPSC    +     ICH    P+   L ENH  F   HQQE *+ HCE   +I++CNQ GIAE  QK
Subject   4367  ER*HSQRRPPSWSLS*NCMAALIQTLDSQTSYSPSCICKLYPPIILICHFAPIPRLRDLSENHKYFGMGHQQEI*RHHCEL*ANINQCNQGGIAEPRQK  4663

Range 7: 4037 to 4159 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.1 bits(68) 0.0 18/41(44%) 0/41(0%) Minus/Minus
Query        2  CIGNSFQPQMFQAQLSILFV*CQKLTLQQAKALNR*ISHHL  124
                C GN F PQ  +AQLS L         ++A ALN *  H L
Subject   4037  CKGNFFLPQKSRAQLSTLLALYLSWIFRRAMALNH*TFHRL  4159

Range 8: 4217 to 4264 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
22.6 bits(43) 0.0 9/16(56%) 0/16(0%) Minus/Minus
Query      182  YTLHPFPGPF*LNLLE  229
                Y  HPFP  F*L+ L+
Subject   4217  YNHHPFPDLF*LSWLK  4264

Range 9: 4466 to 4600 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 23/45(51%) 0/45(0%) Plus/Plus
Query      431  KAHMILKKIELFWVLNRVTY*GCSKESHIGTTWRAGGL*IRCLIQ  565
                K  MIL+KI   W  ++VTY*   +     TTWR GGL*I+CL Q
Subject   4466  KVLMILRKIAQSWDRSKVTY*NYWRVKLTDTTWRVGGL*IQCLNQ  4600

Range 10: 4229 to 4411 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.9 bits(96) 0.0 32/61(52%) 0/61(0%) Plus/Plus
Query      194  QSKGTWKWMKSVXXXXXXXXXXXXGMSLPLKSSLGKLQA*RLVIA*FLMKFSYSLLVTSIY  376
                QSK  WKWM  VRW + AN R+R GM   L+   G+L  *R     FL +FSYS LVT IY
Subject   4229  QSKEIWKWMMIVRWQKLANLRKRDGMW*LLRCFSGRLMV*RQATVSFLTRFSYSPLVTLIY  4411

Range 11: 4037 to 4189 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.5 bits(82) 0.0 23/51(45%) 0/51(0%) Plus/Plus
Query        2  *VMRNLTIQSLGLLECQLLTSNKEN*QLCLEHLGLERVSYTRAS*RDLKEN  154
                * M++  IQS G  E      ++E+*QLC   LG E+VS+TRAS*+  +E+
Subject   4037  *AMKSSMIQSHGSPEYPRKI*SQES*QLCSGLLGQEKVSFTRAS*KGQRES  4189

Nucleotide Sequence (337 letters)

Query ID:ds2016-57_12
Query definition:No definition line
Query length:638
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 8 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
34
68
102
136
170
204
238
272
306
337

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome

Sequence ID: KR054734.1 Length: 8753 Number of Matches: 6

Range 1: 3325 to 3657 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
253.1 bits(546) 0.0 105/111(95%) 0/111(0%) Minus/Plus
Query        3  STDGLALKAGIRSFVESESLENPSMSAQTVLRQLSKNAYAENEMIALFCIRHHVRLMIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPWAPLNGCMITAIASALGRREVD  335
                STDGLALKAGIRSFVESESL +PS+SAQTVLRQLS NAYAENEMIALFCIRHHVRL+IITPEYEVSWKFGDSEWPLCGILCLQSNHFQP APLNGCMITAIASALGRREVD
Subject   3325  STDGLALKAGIRSFVESESLVDPSLSAQTVLRQLSDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVD  3657

Range 2: 3324 to 3659 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
233.8 bits(504) 0.0 102/112(91%) 0/112(0%) Plus/Minus
Query        1  TSTSRLPSAEAMAVIMQPLRGAQG*K*FDCKHKIPHRGHSLSPNFQLTSYSGVIIISLT*CLMQNKAIISFSA*AFLLSCLKTVWADIDGFSRDSLSTKERMPAFRASPSVL  336
                TSTSRLPSAEA+AVIMQP  GAQG*K*FDCKHKIPHRGHSLSPNFQLTSYSGVI+ISLT*CLMQNKAIISFSA*A  LSCLKTVWAD DG +RDSLSTKERMPAF+ASPSVL
Subject   3324  TSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHRGHSLSPNFQLTSYSGVIMISLT*CLMQNKAIISFSA*ALSLSCLKTVWADKDGSTRDSLSTKERMPAFKASPSVL  3659

Range 3: 3325 to 3657 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
231.1 bits(498) 0.0 95/111(86%) 0/111(0%) Plus/Minus
Query        3  IHFTSAKRGGNGCNHAAIKRGPRLKMI*LQA*DSTQRPLAISKLPTHLIFWSNNHQPHMMPNAE*GYHFVLCISIFTELP*NGLG*HRWIFKRFTFNERTYACFQSKPICT  335
                IHFTS +R G+ C+HAAI  G RLKMI*LQA*DSTQRPLAISKLPTHLIFW NN QPHMMPNA+*GYHFVLCISI TELP NGLG* RWI+KRFTFNERTYACFQSKPICT
Subject   3325  IHFTSTERRGDSCDHAAI*WGTRLKMI*LQA*DSTQRPLAISKLPTHLIFWGNNDQPHMMPNAK*GYHFVLCISIITELPQNGLG*QRWIYKRFTFNERTYACFQSKPICT  3657

Range 4: 3323 to 3658 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
216.0 bits(465) 0.0 95/112(85%) 0/112(0%) Plus/Minus
Query        2  HPLHVCQARRQWL*SCSH*EGPKVENDLTASIRFHTEATRYLQTSNSPHILE**SSASHDA*CRIRLSFRSLHKHFY*AALKRFGLT*MDFQEIHFQRKNVCLLSEQAHLYS  337
                HPLHV +A+R+ L*SCSH  G KVENDLTASIRFHTEATRYLQTSNSPHIL ** SASHDA*C+IRLSFRSLHKH++*AA KRFGLT MD QEIHFQRKNVCLLS+QAHLYS
Subject   3323  HPLHVYRAQRR*L*SCSHLMGHKVENDLTASIRFHTEATRYLQTSNSPHILG***SASHDA*CKIRLSFRSLHKHYH*AASKRFGLTKMDLQEIHFQRKNVCLLSKQAHLYS  3658

Range 5: 3324 to 3659 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
214.1 bits(461) 0.0 95/112(85%) 0/112(0%) Minus/Plus
Query        1  EYRWACSESRHTFFR*K*IS*KSIYVSPNRFKAAQ*KCLCRERNDSLILH*ASCEADDYYSRI*GELEVWR*RVASVWNLMLAVKSFSTLGPS*WLHDYSHCLRAWQT*SGC  336
                EYRWAC ESRHTFFR*K*IS +SI+VSPNRF+AAQ* CLCRERNDSLILH*ASCEAD YY RI*GELEVWR*RVASVWNLMLAVKSFSTL P  WLHD+S+ L A  T*SGC
Subject   3324  EYRWACFESRHTFFR*K*ISCRSIFVSPNRFEAAQ**CLCRERNDSLILH*ASCEADHYYPRI*GELEVWR*RVASVWNLMLAVKSFSTLCPIKWLHDHSYRLCAR*T*SGC  3659

Range 6: 3323 to 3589 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
174.7 bits(375) 0.0 84/89(94%) 0/89(0%) Minus/Plus
Query       71  *VQMGLL*KQAYVLSLKVNLLKIHLCQPKPF*GSSVKMLMQRTK**PYSALGIM*G**LLLQNMR*VGSLEIASGLCVESYACSQIIFN  337
                *VQMGLL*KQAYVLSLKVNLL IHLCQPKPF*GSSV MLMQRTK**PY ALGIM*G* LL QNMR*VGSLEIASGLCVESYACSQIIFN
Subject   3323  *VQMGLL*KQAYVLSLKVNLL*IHLCQPKPF*GSSVIMLMQRTK**PYFALGIM*G*SLLPQNMR*VGSLEIASGLCVESYACSQIIFN  3589

Grapevine rupestris stem pitting associated virus isolate CS BR, complete genome

Sequence ID: KX958435.1 Length: 8743 Number of Matches: 6

Range 1: 3326 to 3658 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
247.1 bits(533) 0.0 101/111(91%) 0/111(0%) Minus/Plus
Query        3  STDGLALKAGIRSFVESESLENPSMSAQTVLRQLSKNAYAENEMIALFCIRHHVRLMIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPWAPLNGCMITAIASALGRREVD  335
                STDGLALKAGIRSFVESESL +P++S QTVL+QL  NAYAENEMIALFCIRHHVRL+IITPEYEVSWKFGDSEWPLCGILCLQSNHFQP APLNGCMITAIASALGRREVD
Subject   3326  STDGLALKAGIRSFVESESLADPALSTQTVLKQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVD  3658

Range 2: 3325 to 3660 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
215.5 bits(464) 0.0 94/112(84%) 0/112(0%) Plus/Minus
Query        1  TSTSRLPSAEAMAVIMQPLRGAQG*K*FDCKHKIPHRGHSLSPNFQLTSYSGVIIISLT*CLMQNKAIISFSA*AFLLSCLKTVWADIDGFSRDSLSTKERMPAFRASPSVL  336
                TSTSRLPSAEA+AVIM P  GAQG*K*FDCKHKIPH+GHSLSPNFQLTSYSGVIII+LT*CLMQNKAIISFSA*A   SC KTVW D  G +RDSLST ER+PAF+ASPSVL
Subject   3325  TSTSRLPSAEAIAVIMHPFNGAQG*K*FDCKHKIPHKGHSLSPNFQLTSYSGVIIINLT*CLMQNKAIISFSA*ALSPSCFKTVWVDRAGSARDSLSTNERIPAFKASPSVL  3660

Range 3: 3329 to 3658 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.9 bits(419) 0.0 80/110(73%) 0/110(0%) Plus/Minus
Query        3  IHFTSAKRGGNGCNHAAIKRGPRLKMI*LQA*DSTQRPLAISKLPTHLIFWSNNHQPHMMPNAE*GYHFVLCISIFTELP*NGLG*HRWIFKRFTFNERTYACFQSKPIC  332
                IHFTSA+RGGN C+HA+I+ G  LKMI*LQA +ST RPLA+SKLPTH IFW NN+QPHMMPNAE*GYH +LCISI T+L  N LG*  WI K FTF++RTY  FQSKPIC
Subject   3329  IHFTSAERGGNSCDHASIQWGTGLKMI*LQAQNST*RPLAVSKLPTHFIFWGNNYQPHMMPNAE*GYHLILCISIVTKLLQNSLG*QSWICKGFTFDKRTYTSFQSKPIC  3658

Range 4: 3325 to 3660 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
173.4 bits(372) 0.0 76/112(68%) 0/112(0%) Minus/Plus
Query        1  EYRWACSESRHTFFR*K*IS*KSIYVSPNRFKAAQ*KCLCRERNDSLILH*ASCEADDYYSRI*GELEVWR*RVASVWNLMLAVKSFSTLGPS*WLHDYSHCLRAWQT*SGC  336
                E+RWAC ES +TF   K*I  +S  V+PN F+A  *+CLCRE +DSLILH*ASCE D+YY RI* ELEVWR RVA +WN +LAVKSFSTL P  W+HD+S+CLRA QT*SGC
Subject   3325  EHRWACFESWYTFVCRK*IPCRSSSVNPNCFEATW*QCLCRE*DDSLILH*ASCEVDNYYPRI*SELEVWRQRVAFMWNFVLAVKSFSTLCPIEWMHDHSYCLRARQT*SGC  3660

Range 5: 3324 to 3659 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
166.9 bits(358) 0.0 77/112(69%) 0/112(0%) Plus/Minus
Query        2  HPLHVCQARRQWL*SCSH*EGPKVENDLTASIRFHTEATRYLQTSNSPHILE**SSASHDA*CRIRLSFRSLHKHFY*AALKRFGLT*MDFQEIHFQRKNVCLLSEQAHLYS  337
                HPLHVC+ARRQ L*SC H  G +VENDLTAS +FH +ATR LQTSNS HIL ** S SHDA*CRIRLS  SLHKH +  A K+FGLT +D Q IHF++ NV  LS+QAHL S
Subject   3324  HPLHVCRARRQ*L*SCIHSMGHRVENDLTASTKFHIKATRCLQTSNSLHILG**LSTSHDA*CRIRLSSHSLHKHCHQVASKQFGLTELDLQGIHFRQTNVYQLSKQAHLCS  3659

Range 6: 3324 to 3590 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
129.8 bits(277) 0.0 67/89(75%) 0/89(0%) Minus/Plus
Query       71  *VQMGLL*KQAYVLSLKVNLLKIHLCQPKPF*GSSVKMLMQRTK**PYSALGIM*G**LLLQNMR*VGSLEIASGLCVESYACSQIIFN  337
                * QMGLL*K  YV   KVN L+I LCQPK F* + V MLMQR +**PYSALGIM*G**LL QNM+*VGSLE ASGL VE  ACSQIIFN
Subject   3324  *AQMGLL*KLVYVRLSKVNPLQIQLCQPKLF*SNLVTMLMQRMR**PYSALGIM*G**LLPQNMK*VGSLETASGLYVEFCACSQIIFN  3590

Grapevine rupestris stem pitting associated virus isolate VF1, partial genome

Sequence ID: KT948710.1 Length: 8716 Number of Matches: 6

Range 1: 3326 to 3658 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
246.7 bits(532) 0.0 101/111(91%) 0/111(0%) Minus/Plus
Query        3  STDGLALKAGIRSFVESESLENPSMSAQTVLRQLSKNAYAENEMIALFCIRHHVRLMIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPWAPLNGCMITAIASALGRREVD  335
                STDGLALKAGIRSFVESESL +P++S QTVL+QL  NAYAENEMIALFCIRHHVRL+IITPEYEVSWKFGDSEWPLCGILCLQSNHFQP APLNGCMITAIASALGRREVD
Subject   3326  STDGLALKAGIRSFVESESLADPALSTQTVLQQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVD  3658

Range 2: 3325 to 3660 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
215.5 bits(464) 0.0 94/112(84%) 0/112(0%) Plus/Minus
Query        1  TSTSRLPSAEAMAVIMQPLRGAQG*K*FDCKHKIPHRGHSLSPNFQLTSYSGVIIISLT*CLMQNKAIISFSA*AFLLSCLKTVWADIDGFSRDSLSTKERMPAFRASPSVL  336
                TSTSRLPSAEA+AVIMQP  GA G*K*FDCKHKIPH+GHSLSPNFQLTSYSGVI+I+LT*CLMQNKAIISFSA*A   SC KTVW D  G +RDSLST ERMPAF+ASPSVL
Subject   3325  TSTSRLPSAEAIAVIMQPFNGAHG*K*FDCKHKIPHKGHSLSPNFQLTSYSGVIMINLT*CLMQNKAIISFSA*ALSPSCCKTVWVDRAGSARDSLSTNERMPAFKASPSVL  3660

Range 3: 3329 to 3658 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
188.9 bits(406) 0.0 82/110(75%) 0/110(0%) Plus/Minus
Query        3  IHFTSAKRGGNGCNHAAIKRGPRLKMI*LQA*DSTQRPLAISKLPTHLIFWSNNHQPHMMPNAE*GYHFVLCISIFTELP*NGLG*HRWIFKRFTFNERTYACFQSKPIC  332
                I+FTS KR GN C+HAAI+ G  LK+I*LQA +ST RPLAISKLPTH IFWS+N QPHMMPNAE*GYH VLCISI T+L  N LG*  WI K FTFN+RTYA FQSKPIC
Subject   3329  IYFTSTKR*GNSCDHAAIQWGTWLKVI*LQAQNST*RPLAISKLPTHFIFWSDNDQPHMMPNAE*GYHLVLCISIVTKLLQNSLG*QSWICKGFTFNKRTYAGFQSKPIC  3658

Range 4: 3325 to 3660 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
179.3 bits(385) 0.0 77/112(69%) 0/112(0%) Minus/Plus
Query        1  EYRWACSESRHTFFR*K*IS*KSIYVSPNRFKAAQ*KCLCRERNDSLILH*ASCEADDYYSRI*GELEVWR*RVASVWNLMLAVKSFSTLGPS*WLHDYSHCLRAWQT*SGC  336
                E+RWAC ESRHTF  *K*I  +S  V+PN F A  *+CLCRER+DSLILH*ASCE D Y+SRI* ELEVWR*RVA +WN +LA+KS ST+ P  WLHD+S+CL AW T*S C
Subject   3325  EHRWACFESRHTFVC*K*IPCRSSSVNPNCFAATW*QCLCRERDDSLILH*ASCEVDHYHSRI*SELEVWR*RVAFMWNFVLAIKSLSTMCPIEWLHDHSYCLSAW*T*SRC  3660

Range 5: 3324 to 3659 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
168.3 bits(361) 0.0 79/112(71%) 0/112(0%) Plus/Minus
Query        2  HPLHVCQARRQWL*SCSH*EGPKVENDLTASIRFHTEATRYLQTSNSPHILE**SSASHDA*CRIRLSFRSLHKHFY*AALKRFGLT*MDFQEIHFQRKNVCLLSEQAHLYS  337
                H LHV QA RQ L*SCSH  G  VE+DL AS +FH +ATRYLQTSNS HILE** S SHDA*CRIRLS RSLHKH +  A K+FGLT +D Q IHFQ+ NVC LS+QAHL S
Subject   3324  HLLHVYQALRQ*L*SCSHSMGHMVESDLIASTKFHIKATRYLQTSNSLHILE***STSHDA*CRIRLSSRSLHKHCHQVAAKQFGLTELDLQGIHFQQTNVCRLSKQAHLCS  3659

Range 6: 3324 to 3590 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
132.1 bits(282) 0.0 67/89(75%) 0/89(0%) Minus/Plus
Query       71  *VQMGLL*KQAYVLSLKVNLLKIHLCQPKPF*GSSVKMLMQRTK**PYSALGIM*G**LLLQNMR*VGSLEIASGLCVESYACSQIIFN  337
                * QMGLL*K AYV  LKVN L+I LCQPK F  + V MLMQRT+**PYSALGIM*G* L LQNM+*VGSLEIASGL VE  AC+QI FN
Subject   3324  *AQMGLL*KPAYVRLLKVNPLQIQLCQPKLFCSNLVTMLMQRTR**PYSALGIM*G*SLSLQNMK*VGSLEIASGLYVEFCACNQITFN  3590

Grapevine rupestris stem pitting associated virus isolate SK704 A, complete genome

Sequence ID: KX274274.1 Length: 8725 Number of Matches: 6

Range 1: 3325 to 3657 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
246.2 bits(531) 0.0 100/111(90%) 0/111(0%) Minus/Plus
Query        3  STDGLALKAGIRSFVESESLENPSMSAQTVLRQLSKNAYAENEMIALFCIRHHVRLMIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPWAPLNGCMITAIASALGRREVD  335
                STDGLALKAGIRSFVESES+ +P++S QTVL+QL  NAYAENEMIALFCIRHHVRL+IITPEYEVSWKFGDSEWPLCGILCLQSNHFQP APLNGCMITAIASALGRREVD
Subject   3325  STDGLALKAGIRSFVESESIADPALSTQTVLKQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVD  3657

Range 2: 3324 to 3659 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
216.9 bits(467) 0.0 95/112(85%) 0/112(0%) Plus/Minus
Query        1  TSTSRLPSAEAMAVIMQPLRGAQG*K*FDCKHKIPHRGHSLSPNFQLTSYSGVIIISLT*CLMQNKAIISFSA*AFLLSCLKTVWADIDGFSRDSLSTKERMPAFRASPSVL  336
                TSTSRLPSAEA+AVIMQP  GAQG*K*FDCKHKIPH+GHSLSPNFQLTSYSGVI+ISLT*CLMQNKAIISFSA*A   SC KTVW D  G + DSLST ERMPAF+ASPSVL
Subject   3324  TSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHKGHSLSPNFQLTSYSGVIMISLT*CLMQNKAIISFSA*ALSPSCFKTVWVDRAGSAMDSLSTNERMPAFKASPSVL  3659

Range 3: 3328 to 3657 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
169.2 bits(363) 0.0 75/110(68%) 0/110(0%) Plus/Minus
Query        3  IHFTSAKRGGNGCNHAAIKRGPRLKMI*LQA*DSTQRPLAISKLPTHLIFWSNNHQPHMMPNAE*GYHFVLCISIFTELP*NGLG*HRWIFKRFTFNERTYACFQSKPIC  332
                IH TSA+R GN   HAAI+ G  LKMI*LQA +ST RPL ISK PTHLI W +N QPHMMPNAE*GYH VLCISI  +L  N LG*  WI   FTFN+ TYA FQSKP+C
Subject   3328  IHLTSAERRGNSGYHAAIQWGTGLKMI*LQAQNST*RPLTISKFPTHLILWGDNDQPHMMPNAE*GYHLVLCISIVAKLLQNCLG*QSWICNGFTFNK*TYASFQSKPVC  3657

Range 4: 3324 to 3659 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
164.6 bits(353) 0.0 73/112(65%) 0/112(0%) Minus/Plus
Query        1  EYRWACSESRHTFFR*K*IS*KSIYVSPNRFKAAQ*KCLCRERNDSLILH*ASCEADDYYSRI*GELEVWR*RVASVWNLMLAVKSFSTLGPS*WLHDYSHCLRAWQT*SGC  336
                E+R AC ES HTF  *K*I  +S  V+PN F+A   +CLCRER+DSLILH*ASCEAD Y+ R+*GELE+WR* VA +WN +LA+KSFSTL P  WLHD  +CL A QT* GC
Subject   3324  EHRRACFESWHTFIC*K*IHCRSSSVNPNSFEATWRQCLCRERDDSLILH*ASCEADHYHPRV*GELEIWR**VAFMWNFVLAIKSFSTLCPIEWLHDNRYCLCARQT*GGC  3659

Range 5: 3323 to 3658 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
161.0 bits(345) 0.0 75/112(67%) 0/112(0%) Plus/Minus
Query        2  HPLHVCQARRQWL*SCSH*EGPKVENDLTASIRFHTEATRYLQTSNSPHILE**SSASHDA*CRIRLSFRSLHKHFY*AALKRFGLT*MDFQEIHFQRKNVCLLSEQAHLYS  337
                HP HVC+A+RQ   SCSH  G +VENDL AS +FH +AT YLQ SNSPH L ** SASHDA*CRIRLS RSLHKH    A K FGLT +D Q IHFQ+ NVC LS+QA L S
Subject   3323  HPPHVCRAQRQ*RLSCSHSMGHRVENDLIASTKFHIKATHYLQISNSPHTLG***SASHDA*CRIRLSSRSLHKHCRQVASKLFGLTELDLQWIHFQQMNVCQLSKQARLCS  3658

Range 6: 3323 to 3589 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
124.8 bits(266) 0.0 64/89(72%) 0/89(0%) Minus/Plus
Query       71  *VQMGLL*KQAYVLSLKVNLLKIHLCQPKPF*GSSVKMLMQRTK**PYSALGIM*G**LLLQNMR*VGSLEIASGLCVESYACSQIIFN  337
                * Q GLL*K AYV  LKVN L+I LCQPK F* +   MLMQRT+**PYSALGIM*G* L  Q+MR*VG+LEI SGL VE  AC+QIIFN
Subject   3323  *AQTGLL*KLAYVHLLKVNPLQIQLCQPKQF*SNLATMLMQRTR**PYSALGIM*G*SLSPQSMR*VGNLEIVSGLYVEFCACNQIIFN  3589

Grapevine rupestris stem pitting associated virus isolate ISA BR replicase, 24.4 kDa protein, 12.8 kDa protein, 8.4 kDa protein, and 28 kDa protein genes, complete cds

Sequence ID: KX925555.1 Length: 8659 Number of Matches: 6

Range 1: 3309 to 3641 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
238.9 bits(515) 0.0 96/111(86%) 0/111(0%) Minus/Plus
Query        3  STDGLALKAGIRSFVESESLENPSMSAQTVLRQLSKNAYAENEMIALFCIRHHVRLMIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPWAPLNGCMITAIASALGRREVD  335
                STDGLALKAGIRSFVESE L NP +SA T+ +QL +NAYAENEMIALFCIRHHVRL++ITPEYEVSWKFG+SEWPLCGILCL+SNHFQP APLNGCMITAIASALGRREVD
Subject   3309  STDGLALKAGIRSFVESERLVNPDLSAPTISKQLEENAYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVD  3641

Range 2: 3308 to 3643 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
191.7 bits(412) 0.0 86/112(77%) 0/112(0%) Plus/Minus
Query        1  TSTSRLPSAEAMAVIMQPLRGAQG*K*FDCKHKIPHRGHSLSPNFQLTSYSGVIIISLT*CLMQNKAIISFSA*AFLLSCLKTVWADIDGFSRDSLSTKERMPAFRASPSVL  336
                TSTSRLPSAEAMAVIMQP  GA G K*FD + +IPHRGHSLSPNFQLTSYSGVI ISLT C MQN AIISFSA*AF  +CL+ V A+  GF++ SLSTK+R+PAFRASPSVL
Subject   3308  TSTSRLPSAEAMAVIMQPFSGAHGWK*FDLRQRIPHRGHSLSPNFQLTSYSGVITISLTWCRMQNNAIISFSA*AFSSNCLEMVGAERSGFTKRSLSTKDRIPAFRASPSVL  3643

Range 3: 3315 to 3641 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
99.6 bits(211) 0.0 47/109(43%) 0/109(0%) Plus/Minus
Query        3  IHFTSAKRGGNGCNHAAIKRGPRLKMI*LQA*DSTQRPLAISKLPTHLIFWSNNHQPHMMPNAE*GYHFVLCISIFTELP*NGLG*HRWIFKRFTFNERTYACFQSKPI  329
                I+FT +K   NGC+HA I+ G  L+MI* +A +ST  PL   + PT+ IFW N+++P+++ NAE*  H +L ISI  +L  NG G*  WI++  T ++R+      K I
Subject   3315  INFTPSKC*SNGCDHATIQWGAWLEMI*FKAKNST*GPLTFPEFPTNFIFWCNHYKPYVVSNAE*CDHLILGISILFQLFRNGWG*KIWIYQALTLHKRSNTSL*GKSI  3641

Range 4: 3317 to 3643 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
95.9 bits(203) 0.0 46/109(42%) 0/109(0%) Minus/Plus
Query        1  WACSESRHTFFR*K*IS*KSIYVSPNRFKAAQ*KCLCRERNDSLILH*ASCEADDYYSRI*GELEVWR*RVASVWNLMLAVKSFSTLGPS*WLHDYSHCLRAWQT*SGC  327
                W C +  ++ F  +*   KS   SPN F     +CLCRE +D +ILH    +A   Y+RI*  LE+    VA +WN +  +KSF T+ P+ WLHD+SHC   W+ *S C
Subject   3317  WTCPKGWYSIFCGE*ALGKSRSFSPNHF*TIGRECLCRE*DDRIILHSTPRKAYSDYTRI*S*LEIRGK*VAPMWNSLP*IKSFPTMRPTEWLHDHSHCFSTWKA*S*C  3643

Range 5: 3346 to 3642 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.2 bits(149) 0.0 41/99(41%) 0/99(0%) Plus/Minus
Query        2  HPLHVCQARRQWL*SCSH*EGPKVENDLTASIRFHTEATRYLQTSNSPHILE**SSASHDA*CRIRLSFRSLHKHFY*AALKRFGLT*MDFQEIHFQRK  298
                H LH  Q  +QWL*SC+H  G  V NDL     FH  AT + + SN  HIL *   A     CRI  S  S HKH      K  GL  +D    H  +K
Subject   3346  HQLHAFQVLKQWL*SCNHSVGRMVGNDLI*GKEFHIGATHFPRISN*LHILV*SL*ALRGVECRIMRSSHSRHKHSLPIV*KWLGLKDLDLPSAHSPQK  3642

Range 6: 3316 to 3573 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.8 bits(111) 0.0 36/86(42%) 0/86(0%) Minus/Plus
Query       71  MGLL*KQAYVLSLKVNLLKIHLCQPKPF*GSSVKMLMQRTK**PYSALGIM*G**LLLQNMR*VGSLEIASGLCVESYACSQIIFN  328
                M L *+  + L  +V+   I + QP+PF  +  +MLM R +*  YSA    *G * L QNM+ VG+    SG  VE +A +QII N
Subject   3316  MDLP*RLVFDLLWRVSAW*IQIFQPQPFLNNWKRMLMPRMR*SHYSAFDTT*GL**LHQNMKLVGNSGKVSGPYVEFFALNQIISN  3573

Nucleotide Sequence (391 letters)

Query ID:ds2016-57_12
Query definition:No definition line
Query length:638
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 8 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
40
80
120
160
200
240
280
320
360
391

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate ORPN4 collection date Nov 2007 coat protein gene, complete cds

Sequence ID: FJ943304.1 Length: 780 Number of Matches: 7

Range 1: 130 to 507 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
298.9 bits(646) 0.0 122/126(97%) 0/126(0%) Minus/Minus
Query       12  SGWNPRLQMDIPHDFCIVHAKSAQGSHFPYYSSNFRPIQVTEGTLSNQG*SLRATNIRAMACNIYRNVKLIALWYARLTECSNQLIYCTFIHNIRR*HNRLVLQYLPHVHSF*KSIFNDPLPFTKH  389
                SGWNPRLQMDIPHDFCIVHAKSAQGSHFPYYSSNFRPIQVTEGTLSNQG*SLRATNIRAMACNIYRNVKLIAL YARLTECSNQLIYCTFIHNIRR*HNRLVLQ+LPHVHSF*KSIFNDPLPF+K+
Subject    130  SGWNPRLQMDIPHDFCIVHAKSAQGSHFPYYSSNFRPIQVTEGTLSNQG*SLRATNIRAMACNIYRNVKLIAL*YARLTECSNQLIYCTFIHNIRR*HNRLVLQHLPHVHSF*KSIFNDPLPFSKN  507

Range 2: 138 to 506 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
291.1 bits(629) 0.0 118/123(96%) 0/123(0%) Plus/Plus
Query       20  *KGGGH*KCSFKNCGHAGGIEARVCCAIS*CYG*RCNR*VDSSIR*VWHTRERSV*RCDRYCTPLL*CW*LSKINLDWKESLL*PE*V*NCWNNKGSDYPAQILHVLCKNRVEYPSGDGDSTR  388
                *K  GH*KCSFKNCGHAGG+EARVCCAIS*CYG*RCNR*VDSSIR*VWH RERS+*RCDRYCTPLL*CW*LSKINLDWKESLL*PE*V*NCWNNKGSDYPAQILHVLCKNRVEYPSGDGDSTR
Subject    138  *KEEGH*KCSFKNCGHAGGVEARVCCAIS*CYG*RCNR*VDSSIR*VWHIRERSI*RCDRYCTPLL*CW*LSKINLDWKESLL*PE*V*NCWNNKGSDYPAQILHVLCKNRVEYPSGDGDSTR  506

Range 3: 127 to 507 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
284.7 bits(615) 0.0 120/127(94%) 0/127(0%) Plus/Plus
Query        9  GVFGEREGVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGIPESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPA  389
                G+  +R+ VIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGI ESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPA
Subject    127  GILAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPA  507

Range 4: 134 to 508 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
276.5 bits(597) 0.0 122/125(98%) 0/125(0%) Plus/Plus
Query       16  LVKGRGSLKMLFQKLWTCGRY*STSLLCYLLMLWMKVQ*MS*FEHSVSLAYQRAISLTLR*ILHAIALMLVALKDQP*LERVPSVT*IGLKLLE**GK*LPCADFACTMQKSCGISIWRRGFHPL  390
                L+KGRGSLKMLFQKLWTCGR *STSLLCYLLMLWMKVQ*MS*FEHSVSLAYQRAI+LTLR*ILHAIALMLVALKDQP*LERVPSVT*IGLKLLE**GK*LPCADFACTMQKSCGISIWRRGFHPL
Subject    134  LLKGRGSLKMLFQKLWTCGRC*STSLLCYLLMLWMKVQ*MS*FEHSVSLAYQRAINLTLR*ILHAIALMLVALKDQP*LERVPSVT*IGLKLLE**GK*LPCADFACTMQKSCGISIWRRGFHPL  508

Range 5: 126 to 509 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
271.0 bits(585) 0.0 120/128(94%) 0/128(0%) Minus/Minus
Query        8  IAGGIPVSRWIFHTIFA*YMQNLRRVVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSGMPDSPNARINSSIAPSSITLGDSTTDSCFNTSRMSTVFERAFSMTPSLSPNTP  391
                +AGGIPVSRWIFHTIFA*YMQNLRRVVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLS MPDSPNARINSSIAPSSITLGDSTTDSCFNTSRMSTVFERAFSMT  L    P
Subject    126  LAGGIPVSRWIFHTIFA*YMQNLRRVVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSDMPDSPNARINSSIAPSSITLGDSTTDSCFNTSRMSTVFERAFSMTLFLLARMP  509

Range 6: 254 to 508 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
199.9 bits(430) 0.0 83/85(98%) 0/85(0%) Minus/Minus
Query      136  *RVESPSPDGYSTRFLHSTCKICAG*SLPLLFQQFQTYSGHRRDSFQSRLIFESYQHQSNGVQYLSQR*TDRSLVCQTHRMLEST  390
                *RVESPSPDGYSTRFLHSTCKICAG*SLPLLFQQFQTYSGHRRDSFQSRLIFESYQHQSNGVQYLSQR* DRSL+CQTHRMLEST
Subject    254  *RVESPSPDGYSTRFLHSTCKICAG*SLPLLFQQFQTYSGHRRDSFQSRLIFESYQHQSNGVQYLSQR*IDRSLICQTHRMLEST  508

Range 7: 164 to 223 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.3 bits(99) 0.0 19/20(95%) 0/20(0%) Minus/Minus
Query       46  EIAQQTRASIPPACPQFLKE  105
                EIAQQTRAS PPACPQFLKE
Subject    164  EIAQQTRASTPPACPQFLKE  223

Grapevine rupestris stem pitting associated virus isolate ORPN5b collection date Nov 2007 coat protein gene, complete cds

Sequence ID: FJ943306.1 Length: 780 Number of Matches: 7

Range 1: 130 to 507 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
298.9 bits(646) 0.0 122/126(97%) 0/126(0%) Minus/Minus
Query       12  SGWNPRLQMDIPHDFCIVHAKSAQGSHFPYYSSNFRPIQVTEGTLSNQG*SLRATNIRAMACNIYRNVKLIALWYARLTECSNQLIYCTFIHNIRR*HNRLVLQYLPHVHSF*KSIFNDPLPFTKH  389
                SGWNPRLQMDIPHDFCIVHAKSAQGSHFPYYSSNFRPIQVTEGTLSNQG*SLRATNIRAMACNIYRNVKLIAL YARLTECSNQLIYCTFIHNIRR*HNRLVLQ+LPHVHSF*KSIFNDPLPF+K+
Subject    130  SGWNPRLQMDIPHDFCIVHAKSAQGSHFPYYSSNFRPIQVTEGTLSNQG*SLRATNIRAMACNIYRNVKLIAL*YARLTECSNQLIYCTFIHNIRR*HNRLVLQHLPHVHSF*KSIFNDPLPFSKN  507

Range 2: 138 to 506 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
291.1 bits(629) 0.0 118/123(96%) 0/123(0%) Plus/Plus
Query       20  *KGGGH*KCSFKNCGHAGGIEARVCCAIS*CYG*RCNR*VDSSIR*VWHTRERSV*RCDRYCTPLL*CW*LSKINLDWKESLL*PE*V*NCWNNKGSDYPAQILHVLCKNRVEYPSGDGDSTR  388
                *K  GH*KCSFKNCGHAGG+EARVCCAIS*CYG*RCNR*VDSSIR*VWH RERS+*RCDRYCTPLL*CW*LSKINLDWKESLL*PE*V*NCWNNKGSDYPAQILHVLCKNRVEYPSGDGDSTR
Subject    138  *KEEGH*KCSFKNCGHAGGVEARVCCAIS*CYG*RCNR*VDSSIR*VWHIRERSI*RCDRYCTPLL*CW*LSKINLDWKESLL*PE*V*NCWNNKGSDYPAQILHVLCKNRVEYPSGDGDSTR  506

Range 3: 127 to 507 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
284.7 bits(615) 0.0 120/127(94%) 0/127(0%) Plus/Plus
Query        9  GVFGEREGVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGIPESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPA  389
                G+  +R+ VIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGI ESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPA
Subject    127  GILAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPA  507

Range 4: 134 to 508 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
276.5 bits(597) 0.0 122/125(98%) 0/125(0%) Plus/Plus
Query       16  LVKGRGSLKMLFQKLWTCGRY*STSLLCYLLMLWMKVQ*MS*FEHSVSLAYQRAISLTLR*ILHAIALMLVALKDQP*LERVPSVT*IGLKLLE**GK*LPCADFACTMQKSCGISIWRRGFHPL  390
                L+KGRGSLKMLFQKLWTCGR *STSLLCYLLMLWMKVQ*MS*FEHSVSLAYQRAI+LTLR*ILHAIALMLVALKDQP*LERVPSVT*IGLKLLE**GK*LPCADFACTMQKSCGISIWRRGFHPL
Subject    134  LLKGRGSLKMLFQKLWTCGRC*STSLLCYLLMLWMKVQ*MS*FEHSVSLAYQRAINLTLR*ILHAIALMLVALKDQP*LERVPSVT*IGLKLLE**GK*LPCADFACTMQKSCGISIWRRGFHPL  508

Range 5: 126 to 509 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
271.0 bits(585) 0.0 120/128(94%) 0/128(0%) Minus/Minus
Query        8  IAGGIPVSRWIFHTIFA*YMQNLRRVVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSGMPDSPNARINSSIAPSSITLGDSTTDSCFNTSRMSTVFERAFSMTPSLSPNTP  391
                +AGGIPVSRWIFHTIFA*YMQNLRRVVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLS MPDSPNARINSSIAPSSITLGDSTTDSCFNTSRMSTVFERAFSMT  L    P
Subject    126  LAGGIPVSRWIFHTIFA*YMQNLRRVVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSDMPDSPNARINSSIAPSSITLGDSTTDSCFNTSRMSTVFERAFSMTLFLLARMP  509

Range 6: 254 to 508 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
199.9 bits(430) 0.0 83/85(98%) 0/85(0%) Minus/Minus
Query      136  *RVESPSPDGYSTRFLHSTCKICAG*SLPLLFQQFQTYSGHRRDSFQSRLIFESYQHQSNGVQYLSQR*TDRSLVCQTHRMLEST  390
                *RVESPSPDGYSTRFLHSTCKICAG*SLPLLFQQFQTYSGHRRDSFQSRLIFESYQHQSNGVQYLSQR* DRSL+CQTHRMLEST
Subject    254  *RVESPSPDGYSTRFLHSTCKICAG*SLPLLFQQFQTYSGHRRDSFQSRLIFESYQHQSNGVQYLSQR*IDRSLICQTHRMLEST  508

Range 7: 164 to 223 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.3 bits(99) 0.0 19/20(95%) 0/20(0%) Minus/Minus
Query       46  EIAQQTRASIPPACPQFLKE  105
                EIAQQTRAS PPACPQFLKE
Subject    164  EIAQQTRASTPPACPQFLKE  223

Grapevine rupestris stem pitting associated virus isolate EWCH6 collection date Nov 2005 coat protein gene, complete cds

Sequence ID: FJ943289.1 Length: 780 Number of Matches: 7

Range 1: 130 to 507 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
297.1 bits(642) 0.0 121/126(96%) 0/126(0%) Minus/Minus
Query       12  SGWNPRLQMDIPHDFCIVHAKSAQGSHFPYYSSNFRPIQVTEGTLSNQG*SLRATNIRAMACNIYRNVKLIALWYARLTECSNQLIYCTFIHNIRR*HNRLVLQYLPHVHSF*KSIFNDPLPFTKH  389
                SGWNPRLQMDIPHDFCIVHAKSAQGSHFPYYSSNFRPIQVTEGTLSNQG*SLRATNIRA+ACNIYRNVKLIAL YARLTECSNQLIYCTFIHNIRR*HNRLVLQ+LPHVHSF*KSIFNDPLPF+K+
Subject    130  SGWNPRLQMDIPHDFCIVHAKSAQGSHFPYYSSNFRPIQVTEGTLSNQG*SLRATNIRAVACNIYRNVKLIAL*YARLTECSNQLIYCTFIHNIRR*HNRLVLQHLPHVHSF*KSIFNDPLPFSKN  507

Range 2: 138 to 506 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
291.6 bits(630) 0.0 119/123(97%) 0/123(0%) Plus/Plus
Query       20  *KGGGH*KCSFKNCGHAGGIEARVCCAIS*CYG*RCNR*VDSSIR*VWHTRERSV*RCDRYCTPLL*CW*LSKINLDWKESLL*PE*V*NCWNNKGSDYPAQILHVLCKNRVEYPSGDGDSTR  388
                *K  GH*KCSFKNCGHAGG+EARVCCAIS*CYG*RCNR*VDSSIR*VWH RERSV*RCDRYCTPLL*CW*LSKINLDWKESLL*PE*V*NCWNNKGSDYPAQILHVLCKNRVEYPSGDGDSTR
Subject    138  *KEEGH*KCSFKNCGHAGGVEARVCCAIS*CYG*RCNR*VDSSIR*VWHIRERSV*RCDRYCTPLL*CW*LSKINLDWKESLL*PE*V*NCWNNKGSDYPAQILHVLCKNRVEYPSGDGDSTR  506

Range 3: 127 to 507 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
284.7 bits(615) 0.0 120/127(94%) 0/127(0%) Plus/Plus
Query        9  GVFGEREGVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGIPESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPA  389
                G+  +R+ VIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGI ESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPA
Subject    127  GILAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPA  507

Range 4: 134 to 508 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
275.5 bits(595) 0.0 122/125(98%) 0/125(0%) Plus/Plus
Query       16  LVKGRGSLKMLFQKLWTCGRY*STSLLCYLLMLWMKVQ*MS*FEHSVSLAYQRAISLTLR*ILHAIALMLVALKDQP*LERVPSVT*IGLKLLE**GK*LPCADFACTMQKSCGISIWRRGFHPL  390
                L+KGRGSLKMLFQKLWTCGR *STSLLCYLLMLWMKVQ*MS*FEHSVSLAYQRAISLTLR*ILHA ALMLVALKDQP*LERVPSVT*IGLKLLE**GK*LPCADFACTMQKSCGISIWRRGFHPL
Subject    134  LLKGRGSLKMLFQKLWTCGRC*STSLLCYLLMLWMKVQ*MS*FEHSVSLAYQRAISLTLR*ILHATALMLVALKDQP*LERVPSVT*IGLKLLE**GK*LPCADFACTMQKSCGISIWRRGFHPL  508

Range 5: 126 to 509 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
271.0 bits(585) 0.0 120/128(94%) 0/128(0%) Minus/Minus
Query        8  IAGGIPVSRWIFHTIFA*YMQNLRRVVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSGMPDSPNARINSSIAPSSITLGDSTTDSCFNTSRMSTVFERAFSMTPSLSPNTP  391
                +AGGIPVSRWIFHTIFA*YMQNLRRVVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLS MPDSPNARINSSIAPSSITLGDSTTDSCFNTSRMSTVFERAFSMT  L    P
Subject    126  LAGGIPVSRWIFHTIFA*YMQNLRRVVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSDMPDSPNARINSSIAPSSITLGDSTTDSCFNTSRMSTVFERAFSMTLFLLARMP  509

Range 6: 254 to 508 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
200.4 bits(431) 0.0 83/85(98%) 0/85(0%) Minus/Minus
Query      136  *RVESPSPDGYSTRFLHSTCKICAG*SLPLLFQQFQTYSGHRRDSFQSRLIFESYQHQSNGVQYLSQR*TDRSLVCQTHRMLEST  390
                *RVESPSPDGYSTRFLHSTCKICAG*SLPLLFQQFQTYSGHRRDSFQSRLIFESYQHQS+GVQYLSQR*TDRSL+CQTHRMLEST
Subject    254  *RVESPSPDGYSTRFLHSTCKICAG*SLPLLFQQFQTYSGHRRDSFQSRLIFESYQHQSSGVQYLSQR*TDRSLICQTHRMLEST  508

Range 7: 164 to 223 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.3 bits(99) 0.0 19/20(95%) 0/20(0%) Minus/Minus
Query       46  EIAQQTRASIPPACPQFLKE  105
                EIAQQTRAS PPACPQFLKE
Subject    164  EIAQQTRASTPPACPQFLKE  223

Rupestris stem pitting associated virus isolate H2 coat protein gene, complete cds

Sequence ID: GQ478315.1 Length: 905 Number of Matches: 7

Range 1: 192 to 569 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
296.2 bits(640) 0.0 120/126(95%) 0/126(0%) Minus/Minus
Query       12  SGWNPRLQMDIPHDFCIVHAKSAQGSHFPYYSSNFRPIQVTEGTLSNQG*SLRATNIRAMACNIYRNVKLIALWYARLTECSNQLIYCTFIHNIRR*HNRLVLQYLPHVHSF*KSIFNDPLPFTKH  389
                SGWNPRLQMDIPHDFCIVHAKSAQGSHFPYYSSNFRPIQVTEGTLSNQG*SLRATNIRAMACNIYRNVKLIAL YARLTECSNQLIYCTFIHNIRR*H+RLVLQ+LPH+HSF*KSIFNDPLPF+K+
Subject    192  SGWNPRLQMDIPHDFCIVHAKSAQGSHFPYYSSNFRPIQVTEGTLSNQG*SLRATNIRAMACNIYRNVKLIAL*YARLTECSNQLIYCTFIHNIRR*HDRLVLQHLPHIHSF*KSIFNDPLPFSKN  569

Range 2: 189 to 569 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
281.0 bits(607) 0.0 118/127(93%) 0/127(0%) Plus/Plus
Query        9  GVFGEREGVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGIPESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPA  389
                G+  +R+ VIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGI ESDQFNV IDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIR+VTTLRRFCMYYAKIVWNIHLETGIPPA
Subject    189  GILAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVTIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIRKVTTLRRFCMYYAKIVWNIHLETGIPPA  569

Range 3: 200 to 568 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
272.8 bits(589) 0.0 114/123(93%) 0/123(0%) Plus/Plus
Query       20  *KGGGH*KCSFKNCGHAGGIEARVCCAIS*CYG*RCNR*VDSSIR*VWHTRERSV*RCDRYCTPLL*CW*LSKINLDWKESLL*PE*V*NCWNNKGSDYPAQILHVLCKNRVEYPSGDGDSTR  388
                *K  GH*KCSFKNCG+AGG+EARVC AIS*CYG*RCNR*VDSSIR*VWH RERSV*R DRYCTPLL*CW*LS+INLDWKESLL*PE*V*NCWNNK SDYPAQILHVLCKNRVEYPSGDGDSTR
Subject    200  *KEEGH*KCSFKNCGYAGGVEARVCRAIS*CYG*RCNR*VDSSIR*VWHIRERSV*RYDRYCTPLL*CW*LSEINLDWKESLL*PE*V*NCWNNKESDYPAQILHVLCKNRVEYPSGDGDSTR  568

Range 4: 196 to 570 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
271.0 bits(585) 0.0 120/125(96%) 0/125(0%) Plus/Plus
Query       16  LVKGRGSLKMLFQKLWTCGRY*STSLLCYLLMLWMKVQ*MS*FEHSVSLAYQRAISLTLR*ILHAIALMLVALKDQP*LERVPSVT*IGLKLLE**GK*LPCADFACTMQKSCGISIWRRGFHPL  390
                L+KGRGSLKMLFQKLW CGR *STSL CYLLMLWMKVQ*MS*FEHSVSLAYQRAISLTLR*ILHAIALMLVAL+DQP*LERVPSVT*IGLKLLE**GK*LPCADFACTMQKSCGISIWRRGFHPL
Subject    196  LLKGRGSLKMLFQKLWICGRC*STSLSCYLLMLWMKVQ*MS*FEHSVSLAYQRAISLTLR*ILHAIALMLVALRDQP*LERVPSVT*IGLKLLE**GK*LPCADFACTMQKSCGISIWRRGFHPL  570

Range 5: 188 to 571 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
264.5 bits(571) 0.0 117/128(91%) 0/128(0%) Minus/Minus
Query        8  IAGGIPVSRWIFHTIFA*YMQNLRRVVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSGMPDSPNARINSSIAPSSITLGDSTTDSCFNTSRMSTVFERAFSMTPSLSPNTP  391
                +AGGIPVSRWIFHTIFA*YMQNLRRVVT LIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISI TLN*SLS MPDSPNARINSSIAPSSITLGDSTTDSCFNTSR+STVFERAFSMT  L    P
Subject    188  LAGGIPVSRWIFHTIFA*YMQNLRRVVTFLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIVTLN*SLSDMPDSPNARINSSIAPSSITLGDSTTDSCFNTSRISTVFERAFSMTLFLLARMP  571

Range 6: 316 to 570 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
191.2 bits(411) 0.0 81/85(95%) 0/85(0%) Minus/Minus
Query      136  *RVESPSPDGYSTRFLHSTCKICAG*SLPLLFQQFQTYSGHRRDSFQSRLIFESYQHQSNGVQYLSQR*TDRSLVCQTHRMLEST  390
                *RVESPSPDGYSTRFLHSTCKICAG*SL LLFQQFQTYSGHRRDSFQSRLI ESYQHQSNGVQYLS R*TDRSL+CQTHRMLEST
Subject    316  *RVESPSPDGYSTRFLHSTCKICAG*SLSLLFQQFQTYSGHRRDSFQSRLISESYQHQSNGVQYLS*R*TDRSLICQTHRMLEST  570

Range 7: 226 to 285 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.4 bits(84) 0.0 17/20(85%) 0/20(0%) Minus/Minus
Query       46  EIAQQTRASIPPACPQFLKE  105
                EIA+QTRAS PPA PQFLKE
Subject    226  EIARQTRASTPPAYPQFLKE  285

Grapevine rupestris stem pitting associated virus isolate LN MSL 2 coat protein gene, complete cds

Sequence ID: KF731966.1 Length: 780 Number of Matches: 7

Range 1: 130 to 507 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
296.2 bits(640) 0.0 121/126(96%) 0/126(0%) Minus/Minus
Query       12  SGWNPRLQMDIPHDFCIVHAKSAQGSHFPYYSSNFRPIQVTEGTLSNQG*SLRATNIRAMACNIYRNVKLIALWYARLTECSNQLIYCTFIHNIRR*HNRLVLQYLPHVHSF*KSIFNDPLPFTKH  389
                SGWNPRLQMDIPHDFCIVHAKSAQGS+FPYYSSNFRPIQVTEGTLSNQG*SLRATNIRAMACNIYRNVKLIAL YARLTECSNQLIYCTFIHNIRR*HNRLVLQ+LPHVHSF*KSIFNDPLPF+K+
Subject    130  SGWNPRLQMDIPHDFCIVHAKSAQGSYFPYYSSNFRPIQVTEGTLSNQG*SLRATNIRAMACNIYRNVKLIAL*YARLTECSNQLIYCTFIHNIRR*HNRLVLQHLPHVHSF*KSIFNDPLPFSKN  507

Range 2: 138 to 506 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
289.3 bits(625) 0.0 118/123(96%) 0/123(0%) Plus/Plus
Query       20  *KGGGH*KCSFKNCGHAGGIEARVCCAIS*CYG*RCNR*VDSSIR*VWHTRERSV*RCDRYCTPLL*CW*LSKINLDWKESLL*PE*V*NCWNNKGSDYPAQILHVLCKNRVEYPSGDGDSTR  388
                *K  GH*KCSFKNCGHAGG+EARVCCAIS*CYG*RCNR*VDSSIR*VWH RERSV*RCDRYCTPLL*CW*LSKINLDWKESLL*PE*V*NCWNNKGS+YPAQILHVLCKNRVEYPSGDGDSTR
Subject    138  *KEEGH*KCSFKNCGHAGGVEARVCCAIS*CYG*RCNR*VDSSIR*VWHIRERSV*RCDRYCTPLL*CW*LSKINLDWKESLL*PE*V*NCWNNKGSNYPAQILHVLCKNRVEYPSGDGDSTR  506

Range 3: 127 to 507 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
284.7 bits(615) 0.0 120/127(94%) 0/127(0%) Plus/Plus
Query        9  GVFGEREGVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGIPESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPA  389
                G+  +R+ VIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGI ESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPA
Subject    127  GILAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPA  507

Range 4: 134 to 508 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
277.8 bits(600) 0.0 123/125(98%) 0/125(0%) Plus/Plus
Query       16  LVKGRGSLKMLFQKLWTCGRY*STSLLCYLLMLWMKVQ*MS*FEHSVSLAYQRAISLTLR*ILHAIALMLVALKDQP*LERVPSVT*IGLKLLE**GK*LPCADFACTMQKSCGISIWRRGFHPL  390
                L+KGRGSLKMLFQKLWTCGR *STSLLCYLLMLWMKVQ*MS*FEHSVSLAYQRAISLTLR*ILHAIALMLVALKDQP*LERVPSVT*IGLKLLE**GK*LPCADFACTMQKSCGISIWRRGFHPL
Subject    134  LLKGRGSLKMLFQKLWTCGRC*STSLLCYLLMLWMKVQ*MS*FEHSVSLAYQRAISLTLR*ILHAIALMLVALKDQP*LERVPSVT*IGLKLLE**GK*LPCADFACTMQKSCGISIWRRGFHPL  508

Range 5: 126 to 509 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
271.0 bits(585) 0.0 120/128(94%) 0/128(0%) Minus/Minus
Query        8  IAGGIPVSRWIFHTIFA*YMQNLRRVVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSGMPDSPNARINSSIAPSSITLGDSTTDSCFNTSRMSTVFERAFSMTPSLSPNTP  391
                +AGGIPVSRWIFHTIFA*YMQNLRRVVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLS MPDSPNARINSSIAPSSITLGDSTTDSCFNTSRMSTVFERAFSMT  L    P
Subject    126  LAGGIPVSRWIFHTIFA*YMQNLRRVVTSLIIPAISDLFRSQKGLFPIKVDL*ELPTSEQWRAISIATLN*SLSDMPDSPNARINSSIAPSSITLGDSTTDSCFNTSRMSTVFERAFSMTLFLLARMP  509

Range 6: 254 to 508 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
199.9 bits(430) 0.0 83/85(98%) 0/85(0%) Minus/Minus
Query      136  *RVESPSPDGYSTRFLHSTCKICAG*SLPLLFQQFQTYSGHRRDSFQSRLIFESYQHQSNGVQYLSQR*TDRSLVCQTHRMLEST  390
                *RVESPSPDGYSTRFLHSTCKICAG* LPLLFQQFQTYSGHRRDSFQSRLIFESYQHQSNGVQYLSQR*TDRSL+CQTHRMLEST
Subject    254  *RVESPSPDGYSTRFLHSTCKICAG*LLPLLFQQFQTYSGHRRDSFQSRLIFESYQHQSNGVQYLSQR*TDRSLICQTHRMLEST  508

Range 7: 164 to 223 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.3 bits(99) 0.0 19/20(95%) 0/20(0%) Minus/Minus
Query       46  EIAQQTRASIPPACPQFLKE  105
                EIAQQTRAS PPACPQFLKE
Subject    164  EIAQQTRASTPPACPQFLKE  223

Nucleotide Sequence (363 letters)

Query ID:ds2016-57_12
Query definition:No definition line
Query length:638
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 8 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
37
74
111
148
185
222
259
296
333
363

Descriptions

Alignments

Rupestris stem pitting associated virus isolate RSP47 4 replicase gene, partial cds; triple gene block protein 1, triple gene block protein 2, and triple gene block protein 3 genes, complete cds; and capsid protein gene, partial cds

Sequence ID: EF105294.1 Length: 2680 Number of Matches: 8

Range 1: 839 to 1198 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
259.0 bits(559) 0.0 100/120(83%) 0/120(0%) Minus/Minus
Query        2  YEVCLSWNADILVRV*EQHIKARSIGDRQVLIKYVYFPLHCTPWSVGLDVPSCQIWTVWHTCCKGYKSLVFRNELPY*ATFTATWNSMDNNWRFKHTKHTNKFKCGQSLDDTTKHTQHNP  361
                YEVCL WNADILVRV*EQHIKARSI DRQVLIKYVYFPLHCTPWSVGLDVP CQIWTVWHTCCKG+KSLVFRNELPY*ATFTATWN+++NNW+FK+TKHTNKFK  QS D    +T   P
Subject    839  YEVCLPWNADILVRV*EQHIKARSIRDRQVLIKYVYFPLHCTPWSVGLDVPPCQIWTVWHTCCKGHKSLVFRNELPY*ATFTATWNTVNNNWKFKYTKHTNKFKSRQSFD*VIHNTHTMP  1198

Range 2: 848 to 1198 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
256.3 bits(553) 0.0 106/117(91%) 0/117(0%) Plus/Plus
Query       11  LGVFGCIVKALSAFEFVGVFCVLKSPVVVHRVPGSGKSSLIRELISEDEAFIAFTAGVPDSPNLTGRYIKPYAPGCAVQGKINILDEYLSISDTSGFDVLFSDPYQNVSIPREAHFI  361
                + +   +VKALSAFEFVGVFCVLK PVVVH VPGSGKSSLIRELISEDEAF+AFTAGVPDSPNLTGRYIKPYAPGCAVQGKINILDEYLS+SDTSGFDVLFSDPYQNVSIPREAHFI
Subject    848  VSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDEAFVAFTAGVPDSPNLTGRYIKPYAPGCAVQGKINILDEYLSVSDTSGFDVLFSDPYQNVSIPREAHFI  1198

Range 3: 964 to 1200 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
180.7 bits(388) 0.0 77/79(97%) 0/79(0%) Minus/Minus
Query      127  FMKCASLGMLTFW*GSENSTSKPEVSEIDKYSSSMFIFPCTAHPGA*GLMYLPVRFGLSGTPAVKAIKASSSEMSSLIR  363
                FMKCASLGMLTFW*GSENSTSKPEVSE DKYSSSMFIFPCTAHPGA*GLMYLPVRFGLSGTPAVKA KASSSEMSSLIR
Subject    964  FMKCASLGMLTFW*GSENSTSKPEVSETDKYSSSMFIFPCTAHPGA*GLMYLPVRFGLSGTPAVKATKASSSEMSSLIR  1200

Range 4: 876 to 986 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.2 bits(149) 0.0 31/37(84%) 0/37(0%) Minus/Minus
Query       39  QK*APLLGYFYRYLELYGQQLEI*AHKTHQQIQMRTK  149
                QK*APLLGYFYRYLE   QQLEI* HKTHQQIQ +TK
Subject    876  QK*APLLGYFYRYLEHCEQQLEI*VHKTHQQIQKQTK  986

Range 5: 871 to 1200 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
201.3 bits(433) 0.0 97/110(88%) 0/110(0%) Plus/Plus
Query       34  QGFVRI*ICWCVLCA*IXXXXXXXXXXX*K*PNKGAHF*RRGFYSLYSRCARQSKSDRKVHQALRSRVCSARENKHT**VLVYLRYFWL*CAVLRPLPECQHSKRGTLHK  363
                Q FV  *ICWCVLC *ISSCC   SR*R*K*PNKGAHF*RRGF  LYSRCARQSKSDR+VHQALRSRVCSARENKHT**VLV L YFWL*CAVLRPLPECQHSK GTLHK
Subject    871  QSFVCF*ICWCVLCT*ISSCCSQCSR*R*K*PNKGAHF*RRGFCGLYSRCARQSKSDREVHQALRSRVCSARENKHT**VLVCL*YFWL*CAVLRPLPECQHSKGGTLHK  1200

Range 6: 942 to 1199 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
178.4 bits(383) 0.0 82/86(95%) 0/86(0%) Plus/Plus
Query      105  FQVAVKVA**GSSFLKTRLL*PLQQVCQTVQI*QEGTSSPTLQGVQCKGK*TYLMSTCLSPILLALMCCSQTLTRMSAFQERHTS*  362
                FQVAVKVA**GSSFLKTRLL PLQQVCQTVQI*Q GTSSPTLQGVQCKGK*TYLMSTCLS ILLALMCCSQTLTRMSAFQ RHTS*
Subject    942  FQVAVKVA**GSSFLKTRLLWPLQQVCQTVQI*QGGTSSPTLQGVQCKGK*TYLMSTCLSLILLALMCCSQTLTRMSAFQGRHTS*  1199

Range 7: 1035 to 1199 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
116.5 bits(248) 0.0 51/55(93%) 0/55(0%) Minus/Minus
Query      198  L*SVPLLEC*HSGKGLRTAHQSQKYRR*TSTHQVCLFSLALHTLERRA*CTFLSD  362
                L*SVP LEC*HSGKGLRTAHQSQKY+R TSTHQVCLFSLALHTLERRA*CT LSD
Subject   1035  L*SVPPLEC*HSGKGLRTAHQSQKYQRQTSTHQVCLFSLALHTLERRA*CTSLSD  1199

Range 8: 868 to 915 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.3 bits(75) 0.0 15/16(94%) 0/16(0%) Minus/Minus
Query       31  STQNTPTNSNADKALT  78
                STQNTPTNS ADKALT
Subject    868  STQNTPTNSKADKALT  915

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: Ham1

Sequence ID: AB277788.1 Length: 2876 Number of Matches: 8

Range 1: 824 to 1174 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
256.3 bits(553) 0.0 106/117(91%) 0/117(0%) Plus/Plus
Query       11  LGVFGCIVKALSAFEFVGVFCVLKSPVVVHRVPGSGKSSLIRELISEDEAFIAFTAGVPDSPNLTGRYIKPYAPGCAVQGKINILDEYLSISDTSGFDVLFSDPYQNVSIPREAHFI  361
                + +   +VKALSAFEFVGVFCVLK PVVVH VPGSGKSSLIRELISEDEAF+AFTAGVPDSPNLTGRYIKPYAPGCAVQGKINILDEYLS+SDTSGFDVLFSDPYQNVSIPREAHFI
Subject    824  VSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDEAFVAFTAGVPDSPNLTGRYIKPYAPGCAVQGKINILDEYLSVSDTSGFDVLFSDPYQNVSIPREAHFI  1174

Range 2: 815 to 1174 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
252.6 bits(545) 0.0 98/120(82%) 0/120(0%) Minus/Minus
Query        2  YEVCLSWNADILVRV*EQHIKARSIGDRQVLIKYVYFPLHCTPWSVGLDVPSCQIWTVWHTCCKGYKSLVFRNELPY*ATFTATWNSMDNNWRFKHTKHTNKFKCGQSLDDTTKHTQHNP  361
                YEVCLSWNADILVRV*EQHIKARSI DRQVLIKYVYFPLHCTPWSVGLDVPSC IWTVWHTCC+G+KSLVFRNELPY*ATFT TWN+++NNW+FK+TKH NKFK  QS D    +T   P
Subject    815  YEVCLSWNADILVRV*EQHIKARSIRDRQVLIKYVYFPLHCTPWSVGLDVPSC*IWTVWHTCCEGHKSLVFRNELPY*ATFTTTWNTVNNNWKFKYTKHANKFKRRQSFD*VIHNTHTMP  1174

Range 3: 940 to 1176 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
180.7 bits(388) 0.0 77/79(97%) 0/79(0%) Minus/Minus
Query      127  FMKCASLGMLTFW*GSENSTSKPEVSEIDKYSSSMFIFPCTAHPGA*GLMYLPVRFGLSGTPAVKAIKASSSEMSSLIR  363
                FMKCASLGMLTFW*GSENSTSKPEVSE DKYSSSMFIFPCTAHPGA*GLMYLPVRFGLSGTPAVKA KASSSEMSSLIR
Subject    940  FMKCASLGMLTFW*GSENSTSKPEVSETDKYSSSMFIFPCTAHPGA*GLMYLPVRFGLSGTPAVKATKASSSEMSSLIR  1176

Range 4: 852 to 962 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
65.2 bits(136) 0.0 29/37(78%) 0/37(0%) Minus/Minus
Query       39  QK*APLLGYFYRYLELYGQQLEI*AHKTHQQIQMRTK  149
                QK*APLLGYFY YLE   QQLEI* HKT QQIQ +TK
Subject    852  QK*APLLGYFYHYLEHCEQQLEI*VHKTRQQIQTQTK  962

Range 5: 847 to 1176 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
197.6 bits(425) 0.0 95/110(86%) 0/110(0%) Plus/Plus
Query       34  QGFVRI*ICWCVLCA*IXXXXXXXXXXX*K*PNKGAHF*RRGFYSLYSRCARQSKSDRKVHQALRSRVCSARENKHT**VLVYLRYFWL*CAVLRPLPECQHSKRGTLHK  363
                Q FV +*ICW VLC *ISSCC   SR* *K*PNKGAHF*RRGF  L+SRCARQSKS+RKVHQALRSRVCSARENKHT**VLV L YFWL*CAVLRPLPECQHSKRGTLHK
Subject    847  QSFVCV*ICWRVLCT*ISSCCSQCSR*W*K*PNKGAHF*RRGFCGLHSRCARQSKSNRKVHQALRSRVCSARENKHT**VLVCL*YFWL*CAVLRPLPECQHSKRGTLHK  1176

Range 6: 918 to 1175 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
180.2 bits(387) 0.0 82/86(95%) 0/86(0%) Plus/Plus
Query      105  FQVAVKVA**GSSFLKTRLL*PLQQVCQTVQI*QEGTSSPTLQGVQCKGK*TYLMSTCLSPILLALMCCSQTLTRMSAFQERHTS*  362
                FQV VKVA**GSSFLKTRLL P QQVCQTVQI*QEGTSSPTLQGVQCKGK*TYLMSTCLS ILLALMCCSQTLTRMSAFQERHTS*
Subject    918  FQVVVKVA**GSSFLKTRLLWPSQQVCQTVQI*QEGTSSPTLQGVQCKGK*TYLMSTCLSLILLALMCCSQTLTRMSAFQERHTS*  1175

Range 7: 1011 to 1175 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
120.7 bits(257) 0.0 52/55(95%) 0/55(0%) Minus/Minus
Query      198  L*SVPLLEC*HSGKGLRTAHQSQKYRR*TSTHQVCLFSLALHTLERRA*CTFLSD  362
                L*SVPLLEC*HSGKGLRTAHQSQKY+R TSTHQVCLFSLALHTLERRA*CTFL D
Subject   1011  L*SVPLLEC*HSGKGLRTAHQSQKYQRQTSTHQVCLFSLALHTLERRA*CTFLLD  1175

Range 8: 844 to 891 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.0 bits(81) 0.0 16/16(100%) 0/16(0%) Minus/Minus
Query       31  STQNTPTNSNADKALT  78
                STQNTPTNSNADKALT
Subject    844  STQNTPTNSNADKALT  891

Grapevine rupestris stem pitting associated virus isolate SK30, complete genome

Sequence ID: KX274277.1 Length: 8724 Number of Matches: 9

Range 1: 6568 to 6918 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
250.8 bits(541) 0.0 103/117(88%) 0/117(0%) Plus/Plus
Query       11  LGVFGCIVKALSAFEFVGVFCVLKSPVVVHRVPGSGKSSLIRELISEDEAFIAFTAGVPDSPNLTGRYIKPYAPGCAVQGKINILDEYLSISDTSGFDVLFSDPYQNVSIPREAHFI  361
                L +   +VKALSAFEFVGVFCVLK PVVVH VPGSGKSSLIRELISEDE F+AFTAGVPDSPNLTGRYIKPY+PGCAVQGKINILDEYLS+SD SGFDVLFSDPYQN+SIPREAHFI
Subject   6568  LSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDEDFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDVSGFDVLFSDPYQNISIPREAHFI  6918

Range 2: 6559 to 6918 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
223.3 bits(481) 0.0 86/120(72%) 0/120(0%) Minus/Minus
Query        2  YEVCLSWNADILVRV*EQHIKARSIGDRQVLIKYVYFPLHCTPWSVGLDVPSCQIWTVWHTCCKGYKSLVFRNELPY*ATFTATWNSMDNNWRFKHTKHTNKFKCGQSLDDTTKHTQHNP  361
                YEVCL WNAD+LV V*EQHIK R+I DRQVLIKY+Y PLHCTPW VGLDVPSC IWTVWHT C+ +K LV  + LPY*ATFT TWN+M+NNW+FKHT++TNK KC QSLD    +TQ  P
Subject   6559  YEVCLPWNADVLVGV*EQHIKTRNIRDRQVLIKYIYLPLHCTPWRVGLDVPSC*IWTVWHTRCESHKVLVLGD*LPY*ATFTTTWNTMNNNWKFKHTENTNKLKCRQSLD*VIHNTQTMP  6918

Range 3: 6684 to 6920 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
167.4 bits(359) 0.0 70/79(89%) 0/79(0%) Minus/Minus
Query      127  FMKCASLGMLTFW*GSENSTSKPEVSEIDKYSSSMFIFPCTAHPGA*GLMYLPVRFGLSGTPAVKAIKASSSEMSSLIR  363
                FMKCASLGML FW*GSENSTSKPE SE DKYSSS+FIFPCTAHPG *GLMYLPVRFGLSGTPAVKA K+SSSE++SLIR
Subject   6684  FMKCASLGMLMFW*GSENSTSKPETSETDKYSSSIFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKSSSSEINSLIR  6920

Range 4: 6590 to 6694 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.0 bits(142) 0.0 28/35(80%) 0/35(0%) Minus/Minus
Query       33  PLLGYFYRYLELYGQQLEI*AHKTHQQIQMRTKP*  137
                PLLGYFY YLE Y QQLEI*AH+ HQQ QM+TKP*
Subject   6590  PLLGYFYHYLEHYEQQLEI*AHRKHQQTQMQTKP*  6694

Range 5: 6656 to 6919 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
142.2 bits(304) 0.0 68/88(77%) 0/88(0%) Plus/Plus
Query       99  IEFQVAVKVA**GSSFLKTRLL*PLQQVCQTVQI*QEGTSSPTLQGVQCKGK*TYLMSTCLSPILLALMCCSQTLTRMSAFQERHTS*  362
                I FQV VKVA**GS   +TR L   Q+VCQTVQI*QEGTSSPTLQGVQCKG+* YLMSTCLS + L LMCCSQT TR SAFQ RHTS*
Subject   6656  IVFQVVVKVA**GS*SPRTRTLWLSQRVCQTVQI*QEGTSSPTLQGVQCKGR*IYLMSTCLSLMFLVLMCCSQTPTRTSAFQGRHTS*  6919

Range 6: 6591 to 6641 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.7 bits(76) 0.0 14/17(82%) 0/17(0%) Plus/Plus
Query       34  QGFVRI*ICWCVLCA*I  84
                QGFV I*+CWC LCA*I
Subject   6591  QGFVCI*VCWCFLCA*I  6641

Range 7: 6675 to 6920 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
133.0 bits(284) 0.0 61/82(74%) 0/82(0%) Plus/Plus
Query      118  *K*PNKGAHF*RRGFYSLYSRCARQSKSDRKVHQALRSRVCSARENKHT**VLVYLRYFWL*CAVLRPLPECQHSKRGTLHK  363
                *K*PNKG +   RG    +S CARQSKS+RKVHQAL SRVCSARE+K+T**VLV L  FW *CAVLRPLPE QHSK GTLHK
Subject   6675  *K*PNKGVNLRGRGLCGFHSGCARQSKSNRKVHQALLSRVCSAREDKYT**VLVCL*CFWF*CAVLRPLPEHQHSKGGTLHK  6920

Range 8: 6755 to 6919 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
95.9 bits(203) 0.0 44/55(80%) 0/55(0%) Minus/Minus
Query      198  L*SVPLLEC*HSGKGLRTAHQSQKYRR*TSTHQVCLFSLALHTLERRA*CTFLSD  362
                L*SVP LEC* SG+GLRTAHQ+QK++R TSTHQV L SLALHTLE RA*CTFL D
Subject   6755  L*SVPPLEC*CSGRGLRTAHQNQKHQRQTSTHQVYLSSLALHTLESRA*CTFLLD  6919

Range 9: 6588 to 6635 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.3 bits(75) 0.0 15/16(94%) 0/16(0%) Minus/Minus
Query       31  STQNTPTNSNADKALT  78
                STQ TPTNSNADKALT
Subject   6588  STQKTPTNSNADKALT  6635

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: Hai1

Sequence ID: AB277787.1 Length: 2876 Number of Matches: 9

Range 1: 824 to 1174 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
250.3 bits(540) 0.0 102/117(87%) 0/117(0%) Plus/Plus
Query       11  LGVFGCIVKALSAFEFVGVFCVLKSPVVVHRVPGSGKSSLIRELISEDEAFIAFTAGVPDSPNLTGRYIKPYAPGCAVQGKINILDEYLSISDTSGFDVLFSDPYQNVSIPREAHFI  361
                + +   +VKALSAFEFVGVFCVLK PVVVH VPGSGKSSLIRELISEDE+F+AFTAGVPDSPNLTGRYIKPY+PGCAVQGKINILDEYLS+SD SGFDVLFSDPYQN+SIPREAHFI
Subject    824  VSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDISGFDVLFSDPYQNISIPREAHFI  1174

Range 2: 815 to 1174 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
231.1 bits(498) 0.0 87/120(72%) 0/120(0%) Minus/Minus
Query        2  YEVCLSWNADILVRV*EQHIKARSIGDRQVLIKYVYFPLHCTPWSVGLDVPSCQIWTVWHTCCKGYKSLVFRNELPY*ATFTATWNSMDNNWRFKHTKHTNKFKCGQSLDDTTKHTQHNP  361
                YEVCL WNAD+LV V*EQHIK R+I DRQVLIKY+Y PLHCTPW VGLDVPSC IWTVWHT CK +K  V RN+LPY*ATFT TWN+M+NNW+FK+T+H NKFKC QSLD    +T   P
Subject    815  YEVCLPWNADVLVGV*EQHIKTRNIRDRQVLIKYIYLPLHCTPWRVGLDVPSC*IWTVWHTRCKSHKRFVLRNKLPY*ATFTTTWNTMNNNWKFKYTEHANKFKCRQSLD*VIHNTHTTP  1174

Range 3: 940 to 1176 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
168.8 bits(362) 0.0 71/79(90%) 0/79(0%) Minus/Minus
Query      127  FMKCASLGMLTFW*GSENSTSKPEVSEIDKYSSSMFIFPCTAHPGA*GLMYLPVRFGLSGTPAVKAIKASSSEMSSLIR  363
                FMKCASLGML FW*GSENSTSKPE+SE DKYSSS+FIFPCTAHPG *GLMYLPVRFGLSGTPAVKA K SSSE+SSLIR
Subject    940  FMKCASLGMLMFW*GSENSTSKPEISETDKYSSSIFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEISSLIR  1176

Range 4: 846 to 962 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
74.4 bits(156) 0.0 32/39(82%) 0/39(0%) Minus/Minus
Query       33  QK*APLLGYFYRYLELYGQQLEI*AHKTHQQIQMRTKP*  149
                QK*APLLGYFY YLE Y QQLEI* H+T QQIQM+TKP*
Subject    846  QK*APLLGYFYHYLEHYEQQLEI*VHRTRQQIQMQTKP*  962

Range 5: 912 to 1175 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
154.1 bits(330) 0.0 72/88(82%) 0/88(0%) Plus/Plus
Query       99  IEFQVAVKVA**GSSFLKTRLL*PLQQVCQTVQI*QEGTSSPTLQGVQCKGK*TYLMSTCLSPILLALMCCSQTLTRMSAFQERHTS*  362
                I FQV VKVA**GS FL+T LL  LQ+VCQTVQI*QEGTSSPTLQGVQCKG+* YLMSTCLS I L LMCCSQT TR SAFQ RHTS*
Subject    912  IVFQVVVKVA**GSLFLRTNLLWLLQRVCQTVQI*QEGTSSPTLQGVQCKGR*IYLMSTCLSLIFLVLMCCSQTPTRTSAFQGRHTS*  1175

Range 6: 847 to 897 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
33.1 bits(66) 0.0 14/17(82%) 0/17(0%) Plus/Plus
Query       34  QGFVRI*ICWCVLCA*I  84
                QGFV I*ICW VLC *I
Subject    847  QGFVCI*ICWRVLCT*I  897

Range 7: 931 to 1176 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.9 bits(310) 0.0 66/82(80%) 0/82(0%) Plus/Plus
Query      118  *K*PNKGAHF*RRGFYSLYSRCARQSKSDRKVHQALRSRVCSARENKHT**VLVYLRYFWL*CAVLRPLPECQHSKRGTLHK  363
                *K*PNKGA+F* R F   YS CARQSKS+RKVHQAL SRVCSARE+K+T**VLV L YFW *CAVLRPLPE QHSK GTLHK
Subject    931  *K*PNKGAYF*GRIFCGFYSGCARQSKSNRKVHQALLSRVCSAREDKYT**VLVCL*YFWF*CAVLRPLPEHQHSKGGTLHK  1176

Range 8: 1011 to 1175 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.2 bits(208) 0.0 45/55(82%) 0/55(0%) Minus/Minus
Query      198  L*SVPLLEC*HSGKGLRTAHQSQKYRR*TSTHQVCLFSLALHTLERRA*CTFLSD  362
                L*SVP LEC* SG+GLRTAHQ+QKY+R TSTHQV L SLALHTLE RA*CTFL D
Subject   1011  L*SVPPLEC*CSGRGLRTAHQNQKYQRQTSTHQVYLSSLALHTLESRA*CTFLLD  1175

Range 9: 844 to 891 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.0 bits(81) 0.0 16/16(100%) 0/16(0%) Minus/Minus
Query       31  STQNTPTNSNADKALT  78
                STQNTPTNSNADKALT
Subject    844  STQNTPTNSNADKALT  891

Rupestris stem pitting associated virus strain BS, complete genome

Sequence ID: AY881627.1 Length: 8743 Number of Matches: 9

Range 1: 6568 to 6918 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
250.3 bits(540) 0.0 102/117(87%) 0/117(0%) Plus/Plus
Query       11  LGVFGCIVKALSAFEFVGVFCVLKSPVVVHRVPGSGKSSLIRELISEDEAFIAFTAGVPDSPNLTGRYIKPYAPGCAVQGKINILDEYLSISDTSGFDVLFSDPYQNVSIPREAHFI  361
                + +   +VKALSAFEFVGVFCVLK PVVVH VPGSGKSSLIRELISEDE+F+AFTAGVPDSPNLTGRYIKPY+PGCAVQGKINILDEYLS+SD SGFDVLFSDPYQN+SIPREAHFI
Subject   6568  VSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDISGFDVLFSDPYQNISIPREAHFI  6918

Range 2: 6559 to 6918 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
235.7 bits(508) 0.0 89/120(74%) 0/120(0%) Minus/Minus
Query        2  YEVCLSWNADILVRV*EQHIKARSIGDRQVLIKYVYFPLHCTPWSVGLDVPSCQIWTVWHTCCKGYKSLVFRNELPY*ATFTATWNSMDNNWRFKHTKHTNKFKCGQSLDDTTKHTQHNP  361
                YEVCL WNAD+LV V*EQHIK R+I DRQVLIKY+Y PLHCTPW VGLDVPSC IWTVWHT CK +K  V R+ELPY*ATFT TWN+M+NNW+FKHT+HTNKFKC QSLD    +T   P
Subject   6559  YEVCLPWNADVLVGV*EQHIKTRNIRDRQVLIKYIYLPLHCTPWRVGLDVPSC*IWTVWHTRCKSHKRFVLRDELPY*ATFTTTWNTMNNNWKFKHTEHTNKFKCRQSLD*VIHNTHTTP  6918

Range 3: 6684 to 6920 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
170.6 bits(366) 0.0 72/79(91%) 0/79(0%) Minus/Minus
Query      127  FMKCASLGMLTFW*GSENSTSKPEVSEIDKYSSSMFIFPCTAHPGA*GLMYLPVRFGLSGTPAVKAIKASSSEMSSLIR  363
                FMKCASLGML FW*GSENSTSKPE+SE DKYSSS+FIFPCTAHPG *GLMYLPVRFGLSGTPAVKA K SSSEMSSLIR
Subject   6684  FMKCASLGMLMFW*GSENSTSKPEISETDKYSSSIFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR  6920

Range 4: 6590 to 6706 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.5 bits(165) 0.0 33/39(85%) 0/39(0%) Minus/Minus
Query       33  QK*APLLGYFYRYLELYGQQLEI*AHKTHQQIQMRTKP*  149
                Q+*APLLGYFY YLE Y QQLEI*AH+THQQIQM+TKP*
Subject   6590  QR*APLLGYFYHYLEHYEQQLEI*AHRTHQQIQMQTKP*  6706

Range 5: 6656 to 6919 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
151.8 bits(325) 0.0 71/88(81%) 0/88(0%) Plus/Plus
Query       99  IEFQVAVKVA**GSSFLKTRLL*PLQQVCQTVQI*QEGTSSPTLQGVQCKGK*TYLMSTCLSPILLALMCCSQTLTRMSAFQERHTS*  362
                I FQV VKVA**GSS L+T LL  LQ+VCQTVQI*QEGTSSPTLQGVQCKG+* YLMSTCLS I L LMCCSQT T+ SAFQ RHTS*
Subject   6656  IVFQVVVKVA**GSSSLRTNLLWLLQRVCQTVQI*QEGTSSPTLQGVQCKGR*IYLMSTCLSLIFLVLMCCSQTPTKTSAFQGRHTS*  6919

Range 6: 6591 to 6641 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.5 bits(82) 0.0 16/17(94%) 0/17(0%) Plus/Plus
Query       34  QGFVRI*ICWCVLCA*I  84
                QGFV I*ICWCVLCA*I
Subject   6591  QGFVCI*ICWCVLCA*I  6641

Range 7: 6675 to 6920 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
143.1 bits(306) 0.0 65/82(79%) 0/82(0%) Plus/Plus
Query      118  *K*PNKGAHF*RRGFYSLYSRCARQSKSDRKVHQALRSRVCSARENKHT**VLVYLRYFWL*CAVLRPLPECQHSKRGTLHK  363
                *K*PNKGAH * R F   YS CARQSKS+RKVHQAL SRVCSARE+K+T**VLV L YFW *CAVLRPLP+ QHSK GTLHK
Subject   6675  *K*PNKGAHL*GRIFCGFYSGCARQSKSNRKVHQALLSRVCSAREDKYT**VLVCL*YFWF*CAVLRPLPKHQHSKGGTLHK  6920

Range 8: 6755 to 6919 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
95.5 bits(202) 0.0 44/55(80%) 0/55(0%) Minus/Minus
Query      198  L*SVPLLEC*HSGKGLRTAHQSQKYRR*TSTHQVCLFSLALHTLERRA*CTFLSD  362
                L*SVP LEC*  G+GLRTAHQ+QKY+R TSTHQV L SLALHTLE RA*CTFL D
Subject   6755  L*SVPPLEC*CFGRGLRTAHQNQKYQRQTSTHQVYLSSLALHTLESRA*CTFLLD  6919

Range 9: 6588 to 6635 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.0 bits(81) 0.0 16/16(100%) 0/16(0%) Minus/Minus
Query       31  STQNTPTNSNADKALT  78
                STQNTPTNSNADKALT
Subject   6588  STQNTPTNSNADKALT  6635

Nucleotide Sequence (469 letters)

Query ID:ds2016-57_12
Query definition:No definition line
Query length:638
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 8 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
47
94
141
188
235
282
329
376
423
469

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate VF1, partial genome

Sequence ID: KT948710.1 Length: 8716 Number of Matches: 7

Range 1: 4022 to 4486 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
362.6 bits(785) 0.0 151/155(97%) 0/155(0%) Minus/Plus
Query        1  GLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKREGWDVVTFEEFLRKIENLKAGHCVIFDEVQLFPPGYVDVCLLTIRSDAFISLAGDPCQSTYDTQ  465
                GLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDD CKVAKAGKSKREGWDVVTFE FLRKIENLKAGHCVIFDEVQLFPPGYVD+CLLTIRSDAFISLAGDPCQSTYD+Q
Subject   4022  GLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQ  4486

Range 2: 4019 to 4486 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
282.9 bits(611) 0.0 123/156(79%) 0/156(0%) Plus/Minus
Query        1  LGVICALTRVTGE*NESITPYG*QANVNIAWRKQLNLIKNHTMARLQIFNLSEKLFKGHNVPTFSL*FACLCHFATIIHLQVPFN*IG*SPSG*NKGYEFTFRPLHKALVQKAFARSKSSKHDC*FSRFDI*S*YS*KPWLGIIKFLITYHTSQAS  468
                LGVICAL  VT E*NES+T YG*Q  VNIAWRKQLNLIK+HTMA L I NLSEK FKGH+VPT SL* ACLCHFA IIH Q+ FN*I *SP G*NKGYEFTFRPLHKAL+QK  A SKS KHDC F RFDI*S*Y *KPWLGIIKF +TYH S AS
Subject   4019  LGVICALAGVTSE*NESVTSYG*QTKVNIAWRKQLNLIKDHTMACL*ILNLSEKHFKGHDVPTLSL*LACLCHFAAIIHFQISFN*IS*SPPG*NKGYEFTFRPLHKALIQKTLASSKSPKHDCQFPRFDI*S*YP*KPWLGIIKFFVTYHAS*AS  4486

Range 3: 4020 to 4484 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
275.5 bits(595) 0.0 125/155(81%) 0/155(0%) Minus/Plus
Query        3  EA*LV**VMRNLMIPSHGFQEYQLQISNLEN*QSCLELLERAKAFCTRAL*RGLKVNS*PLFHPEGL*PIQLKGTWRWMIVAKWQRQANQREKVGTL*PLKSFSERLKI*RRAIV*FLMRFSCFLQAMLTFAC*PYGVMLSFHSPVTLVKAHMTP  467
                EA*L **V +NLMIPSHGFQ YQLQISNL N*QSCL LLE A+ FC RAL*RGLKVNS*PLFHP GL* IQLK  W+WM+ AKWQRQA+QRE+VGT *PLK FSERL+I*R+AIV* LMRFSCFLQAMLTF C*PY V LSFHS VT  KAHMTP
Subject   4020  EA*LA**VTKNLMIPSHGFQGYQLQISNLGN*QSCLGLLELARVFCIRAL*RGLKVNS*PLFHPGGL*LIQLKEIWKWMMAAKWQRQASQRERVGTS*PLKCFSERLRI*RQAIV*SLMRFSCFLQAMLTFVC*PYEVTLSFHSLVTPAKAHMTP  4484

Range 4: 4021 to 4485 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
253.5 bits(547) 0.0 121/155(78%) 0/155(0%) Minus/Plus
Query        2  RLDWCDK**EI**FQAMAFRNINFKYQISRINSRAWNFWSGQKLFVQELYEEV*R*IRNLCFTQKGSSQFN*KGPGDG**LQSGKGRQIKERRLGRCDL*RVSQKD*KSEGGPLCDF**GSAVSSRLC*RLPVNHTE*CFHFTRR*PLSKHI*HP  466
                RL+W DK* +I**FQAMAFR+INFKYQIS I+SRAW+FWS Q+  V ELYEEV*R*IRNLCFTQ+GSS FN*K  G+G* LQSGKGRQ+KER LGR DL* VSQKD*+S+G PLCD **GSAVSSRLC* L VNHT+* FHFTR *PL KHI* P
Subject   4021  RLNWRDK*RKI**FQAMAFRDINFKYQISGIDSRAWDFWSWQEFSV*ELYEEV*R*IRNLCFTQEGSS*FN*KRSGNG*WLQSGKGRQVKERGLGRRDL*SVSQKD*ESKGRPLCDL**GSAVSSRLC*PLSVNHTK*RFHFTRW*PLPKHI*LP  4485

Range 5: 4021 to 4371 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
193.5 bits(416) 0.0 114/117(97%) 0/117(0%) Plus/Minus
Query      116  KITQWPAFRFSIFLRNSSKVTTSQPSLFDLPAFATXXXXXXXXXXXXXXARALLGETKVTNLPSDLFIXXXXXXXXXXXXXXSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKP  466
                KITQWPAFRFSIFLRN+SKVTTSQPSLFDLPAFATLQ SSISRSLLIELARALLGETKVTNLPSDLFIKLLY+KLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKP
Subject   4021  KITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRSLLIELARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKP  4371

Range 6: 4411 to 4485 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.8 bits(111) 0.0 23/25(92%) 0/25(0%) Plus/Minus
Query        2  WVSYVL*QGSPASEMKASLRMVNRQ  76
                W SYVL QGSPASEMKASLRMVNRQ
Subject   4411  WESYVLWQGSPASEMKASLRMVNRQ  4485

Range 7: 4119 to 4484 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
172.9 bits(371) 0.0 94/122(77%) 0/122(0%) Plus/Minus
Query        3  GCHMCFDKGHRRVK*KHHSVWLTGKRQHSLEETAEPHQKSHNGPPSDFQSF*ETLQRSQRXXXXXXXXXXXXXXXYHPSPGPF*LNWLEPFWVKQRLRIYLQTXXXXXCTKSFCPLQKFQAR  368
                G HMCF +GH+RVK*K H VWLT K QHSLEETAEPHQ+SHNG P D QSF*ETLQRS+RPN LSL CLPLPLC++HP P  F*LN LEP WVKQRLRIYLQTSS*SS T++ C LQK QAR
Subject   4119  GSHMCFGRGHQRVK*KRHFVWLTDKGQHSLEETAEPHQRSHNGLPLDSQSF*ETLQRSRRPNPLSLTCLPLPLCSHHPFPDLF*LN*LEPSWVKQRLRIYLQTSS*SSYTENSCQLQKSQAR  4484

Grapevine rupestris stem pitting associated virus isolate CS BR, complete genome

Sequence ID: KX958435.1 Length: 8743 Number of Matches: 7

Range 1: 4022 to 4486 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
362.6 bits(785) 0.0 151/155(97%) 0/155(0%) Minus/Plus
Query        1  GLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKREGWDVVTFEEFLRKIENLKAGHCVIFDEVQLFPPGYVDVCLLTIRSDAFISLAGDPCQSTYDTQ  465
                GLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDD CKVAKAGKSKREGWDVVTFE FLRKIENLKAGHCVIFDEVQLFPPGYVD+CLLTIRSDAFISLAGDPCQSTYD+Q
Subject   4022  GLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQ  4486

Range 2: 4019 to 4486 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
305.3 bits(660) 0.0 135/156(87%) 0/156(0%) Plus/Minus
Query        1  LGVICALTRVTGE*NESITPYG*QANVNIAWRKQLNLIKNHTMARLQIFNLSEKLFKGHNVPTFSL*FACLCHFATIIHLQVPFN*IG*SPSG*NKGYEFTFRPLHKALVQKAFARSKSSKHDC*FSRFDI*S*YS*KPWLGIIKFLITYHTSQAS  468
                LGVICALT VT E*NES+T YG*Q  VNIAWRKQLNLI++HTMA L IFNLSEK FKGHNVPT SL*FACLCHFATIIH QV FN*IG*SP G*NKGYEFTFR LH+ALVQKAFA SKSSKH+C*F RFDI*S*YS*KPWLGIIKFLITYHTS AS
Subject   4019  LGVICALTGVTSE*NESVTSYG*QTQVNIAWRKQLNLIEDHTMACL*IFNLSEKHFKGHNVPTLSL*FACLCHFATIIHFQVSFN*IG*SPPG*NKGYEFTFRSLHEALVQKAFASSKSSKHNC*FPRFDI*S*YS*KPWLGIIKFLITYHTS*AS  4486

Range 3: 4020 to 4484 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
296.2 bits(640) 0.0 135/155(87%) 0/155(0%) Minus/Plus
Query        3  EA*LV**VMRNLMIPSHGFQEYQLQISNLEN*QSCLELLERAKAFCTRAL*RGLKVNS*PLFHPEGL*PIQLKGTWRWMIVAKWQRQANQREKVGTL*PLKSFSERLKI*RRAIV*FLMRFSCFLQAMLTFAC*PYGVMLSFHSPVTLVKAHMTP  467
                EA*LV**VMRNLMIPSHGFQEYQLQISNL N*Q CLELLE AKAFCTRA *R LKVNS*PLFHP GL*PIQLK TW+WM+VAKWQRQANQRE+VGTL*PLK FSERLKI*R+AIV*  MRFSCFLQAMLT  C*PY V LSFHS VT VKAHMTP
Subject   4020  EA*LV**VMRNLMIPSHGFQEYQLQISNLGN*QLCLELLELAKAFCTRAS*RDLKVNS*PLFHPGGL*PIQLKETWKWMMVAKWQRQANQRERVGTL*PLKCFSERLKI*RQAIV*SSMRFSCFLQAMLTCVC*PYEVTLSFHSLVTPVKAHMTP  4484

Range 4: 4021 to 4485 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
287.4 bits(621) 0.0 131/155(85%) 0/155(0%) Minus/Plus
Query        2  RLDWCDK**EI**FQAMAFRNINFKYQISRINSRAWNFWSGQKLFVQELYEEV*R*IRNLCFTQKGSSQFN*KGPGDG**LQSGKGRQIKERRLGRCDL*RVSQKD*KSEGGPLCDF**GSAVSSRLC*RLPVNHTE*CFHFTRR*PLSKHI*HP  466
                RL+WCDK**EI**FQAMAFRNINFKYQIS INS AWNFWS QKLFVQEL+EE+*R*IRNLCFTQ+GSSQFN*K PG+G* LQSGKGRQIKER LGRCDL* VSQKD*KS+G PLCD  *GSAVSSRLC* +  NHT+* FHFTR *PLSKHI* P
Subject   4021  RLNWCDK**EI**FQAMAFRNINFKYQISGINSCAWNFWSWQKLFVQELHEEI*R*IRNLCFTQEGSSQFN*KRPGNG*WLQSGKGRQIKERGLGRCDL*SVSQKD*KSKGRPLCDLR*GSAVSSRLC*PVSANHTK*RFHFTRW*PLSKHI*LP  4485

Range 5: 4021 to 4371 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
192.1 bits(413) 0.0 114/117(97%) 0/117(0%) Plus/Minus
Query      116  KITQWPAFRFSIFLRNSSKVTTSQPSLFDLPAFATXXXXXXXXXXXXXXARALLGETKVTNLPSDLFIXXXXXXXXXXXXXXSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKP  466
                KITQWPAFRFSIFLRN+SKVTTSQPSLFDLPAFATLQ SSISRSLLIELARALLGETKVTNLPSDLF+KLLYKKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKP
Subject   4021  KITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRSLLIELARALLGETKVTNLPSDLFMKLLYKKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKP  4371

Range 6: 4414 to 4485 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.5 bits(106) 0.0 22/24(92%) 0/24(0%) Plus/Minus
Query        2  WVSYVL*QGSPASEMKASLRMVNR  73
                W SYVL*QGSPASEMKASLRMV+R
Subject   4414  WESYVL*QGSPASEMKASLRMVSR  4485

Range 7: 4119 to 4484 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
195.8 bits(421) 0.0 101/122(83%) 0/122(0%) Plus/Minus
Query        3  GCHMCFDKGHRRVK*KHHSVWLTGKRQHSLEETAEPHQKSHNGPPSDFQSF*ETLQRSQRXXXXXXXXXXXXXXXYHPSPGPF*LNWLEPFWVKQRLRIYLQTXXXXXCTKSFCPLQKFQAR  368
                G HMCFD+GH+RVK*K H VWL    QHSLEETAEPH++SHNG P DFQSF*ETLQRSQRPN LSLICLPLPLCN+HP PG F*LNWLEP WVKQRLRIYLQ SS*SSCTKSFC LQKFQA+
Subject   4119  GSHMCFDRGHQRVK*KRHFVWLADTGQHSLEETAEPHRRSHNGLPLDFQSF*ETLQRSQRPNPLSLICLPLPLCNHHPFPGLF*LNWLEPSWVKQRLRIYLQISS*SSCTKSFCQLQKFQAQ  4484

Grapevine rupestris stem pitting associated virus isolate SK704 A, complete genome

Sequence ID: KX274274.1 Length: 8725 Number of Matches: 7

Range 1: 4021 to 4485 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
361.2 bits(782) 0.0 150/155(97%) 0/155(0%) Minus/Plus
Query        1  GLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKREGWDVVTFEEFLRKIENLKAGHCVIFDEVQLFPPGYVDVCLLTIRSDAFISLAGDPCQSTYDTQ  465
                GLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK+DLEMDD CKVAKAGKSKREGWDVVTFE FLRKIENLKAGHCVIFDEVQLFPPGYVD+CLLTIRSDAFISLAGDPCQSTYD+Q
Subject   4021  GLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQ  4485

Range 2: 4018 to 4485 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
285.2 bits(616) 0.0 128/156(82%) 0/156(0%) Plus/Minus
Query        1  LGVICALTRVTGE*NESITPYG*QANVNIAWRKQLNLIKNHTMARLQIFNLSEKLFKGHNVPTFSL*FACLCHFATIIHLQVPFN*IG*SPSG*NKGYEFTFRPLHKALVQKAFARSKSSKHDC*FSRFDI*S*YS*KPWLGIIKFLITYHTSQAS  468
                LGVICALT VT +*NES+T YG*   VN+A RK+L+LIKNHTMA L IFNLSEK FKGHNVPTFSL*FACLCHFATIIH QV FN*I *SP G*NKGYE TFRPLHKA VQKAFA SKSSKHDC F RFDI*S*Y *+PWLGIIKFLITY+TS AS
Subject   4018  LGVICALTGVTSK*NESVTSYG**TKVNVARRKKLDLIKNHTMACL*IFNLSEKYFKGHNVPTFSL*FACLCHFATIIHFQVLFN*IS*SPPG*NKGYELTFRPLHKAFVQKAFACSKSSKHDCQFPRFDI*S*YP*EPWLGIIKFLITYNTS*AS  4485

Range 3: 4019 to 4483 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
277.4 bits(599) 0.0 130/155(84%) 0/155(0%) Minus/Plus
Query        3  EA*LV**VMRNLMIPSHGFQEYQLQISNLEN*QSCLELLERAKAFCTRAL*RGLKVNS*PLFHPEGL*PIQLKGTWRWMIVAKWQRQANQREKVGTL*PLKSFSERLKI*RRAIV*FLMRFSCFLQAMLTFAC*PYGVMLSFHSPVTLVKAHMTP  467
                EA*LV *VMRNLMIPSHG Q YQLQISNL N*QSCLELLE+AKAFCT+AL*RGLKV+S*PLFHP GL* IQLK TW+WM+VAKWQRQANQREKVGTL*PLK FSERLKI*R+AIV*FLMR S FL A LTF  *PY V LSFH  VT VKAHMTP
Subject   4019  EA*LVL*VMRNLMIPSHGSQGYQLQISNLGN*QSCLELLEQAKAFCTKAL*RGLKVSS*PLFHPGGL*LIQLKRTWKWMMVAKWQRQANQREKVGTL*PLKYFSERLKI*RQAIV*FLMRSSFFLLATLTFVY*PYEVTLSFHLLVTPVKAHMTP  4483

Range 4: 4020 to 4484 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
269.1 bits(581) 0.0 125/155(81%) 0/155(0%) Minus/Plus
Query        2  RLDWCDK**EI**FQAMAFRNINFKYQISRINSRAWNFWSGQKLFVQELYEEV*R*IRNLCFTQKGSSQFN*KGPGDG**LQSGKGRQIKERRLGRCDL*RVSQKD*KSEGGPLCDF**GSAVSSRLC*RLPVNHTE*CFHFTRR*PLSKHI*HP  466
                RL+WC K**EI**FQAMA R+INFKYQIS I+SRAWNFWS QKL VQ+LYEEV*R*+RNLCFTQ+GSS FN*KGPG+G* LQSGKGRQIKERRLGRCDL* +SQKD*KS+G PLCDF**G A SS L * L +NHT+* FHFT  *PLSKHI* P
Subject   4020  RLNWCYK**EI**FQAMALRDINFKYQISGIDSRAWNFWSRQKLSVQKLYEEV*R*VRNLCFTQEGSS*FN*KGPGNG*WLQSGKGRQIKERRLGRCDL*SISQKD*KSKGRPLCDF**GPAFSSWLR*PLSINHTK*RFHFTCW*PLSKHI*LP  4484

Range 5: 4020 to 4370 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
193.5 bits(416) 0.0 113/117(97%) 0/117(0%) Plus/Minus
Query      116  KITQWPAFRFSIFLRNSSKVTTSQPSLFDLPAFATXXXXXXXXXXXXXXARALLGETKVTNLPSDLFIXXXXXXXXXXXXXXSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKP  466
                KITQWPAFRFSIFLRN+SKVTTSQPSLFDLPAFATLQ SSISRS LIELARALLGETKVTNLPSDLFIKLLY+KLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKP
Subject   4020  KITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRSFLIELARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKP  4370

Range 6: 4410 to 4484 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.1 bits(116) 0.0 24/25(96%) 0/25(0%) Plus/Minus
Query        2  WVSYVL*QGSPASEMKASLRMVNRQ  76
                W SYVL*QGSPASEMKASLRMVNRQ
Subject   4410  WESYVL*QGSPASEMKASLRMVNRQ  4484

Range 7: 4118 to 4483 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
181.6 bits(390) 0.0 98/122(80%) 0/122(0%) Plus/Minus
Query        3  GCHMCFDKGHRRVK*KHHSVWLTGKRQHSLEETAEPHQKSHNGPPSDFQSF*ETLQRSQRXXXXXXXXXXXXXXXYHPSPGPF*LNWLEPFWVKQRLRIYLQTXXXXXCTKSFCPLQKFQAR  368
                G HMCFD+GH++VK*K H VWL  K Q S EE A PHQKSHNG P DFQSF*E LQRSQRPNLLSLICLPLPLCN+HP PGPF*LN LEP WVKQRLR YLQTSS*S CT+SFC LQKFQAR
Subject   4118  GSHMCFDRGHQQVK*KRHFVWLIDKGQRSQEEKAGPHQKSHNGLPLDFQSF*EILQRSQRPNLLSLICLPLPLCNHHPFPGPF*LN*LEPSWVKQRLRTYLQTSS*SFCTESFCLLQKFQAR  4483

Grapevine rupestris stem pitting associated virus isolate GRSPaV LSL, complete genome

Sequence ID: KR054735.1 Length: 8754 Number of Matches: 7

Range 1: 4021 to 4485 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
349.3 bits(756) 0.0 142/155(92%) 0/155(0%) Minus/Plus
Query        1  GLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKREGWDVVTFEEFLRKIENLKAGHCVIFDEVQLFPPGYVDVCLLTIRSDAFISLAGDPCQSTYDTQ  465
                GLTGVISDEKFNDSKPWLSGIST +IK RELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDD CKVAKAGKSK+EGWDVVTFE FLRK++ LKAGHC+IFDEVQLFPPGY+D+CLLTIRSDAFISLAGDPCQSTYD+Q
Subject   4021  GLTGVISDEKFNDSKPWLSGISTKDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDDCKVAKAGKSKKEGWDVVTFEVFLRKVDGLKAGHCIIFDEVQLFPPGYIDLCLLTIRSDAFISLAGDPCQSTYDSQ  4485

Range 2: 4167 to 4370 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
93.2 bits(197) 0.0 54/68(79%) 0/68(0%) Plus/Minus
Query      116  KITQWPAFRFSIFLRNSSKVTTSQPSLFDLPAFATXXXXXXXXXXXXXXARALLGETKVTNLPSDLFI  319
                K+ QWPAF+ S FLRN+SKVTTS PS  DLPAFATLQ SSISRSLLIELA+A LGETKVTN PSDLF+
Subject   4167  KMIQWPAFKPSTFLRNTSKVTTSHPSFLDLPAFATLQSSSISRSLLIELAKARLGETKVTNFPSDLFM  4370

Range 3: 4020 to 4124 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
65.7 bits(137) 0.0 29/35(83%) 0/35(0%) Plus/Minus
Query      362  STTVNSRDLIFEVDIPESHGLESLNFSSLITPVKP  466
                STTVNS   I  VDIPESHG ESLNFSSLITPVKP
Subject   4020  STTVNSLGFISFVDIPESHGFESLNFSSLITPVKP  4124

Range 4: 4413 to 4472 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.9 bits(61) 0.0 13/20(65%) 0/20(0%) Plus/Minus
Query       14  VL*QGSPASEMKASLRMVNR  73
                VL  GSPA +MKASLR+V++
Subject   4413  VLWHGSPARDMKASLRIVSK  4472

Range 5: 4018 to 4485 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.0 bits(273) 0.0 64/156(41%) 0/156(0%) Plus/Minus
Query        1  LGVICALTRVTGE*NESITPYG*QANVNIAWRKQLNLIKNHTMARLQIFNLSEKLFKGHNVPTFSL*FACLCHFATIIHLQVPFN*IG*SPSG*NKGYEFTFRPLHKALVQKAFARSKSSKHDC*FSRFDI*S*YS*KPWLGIIKFLITYHTSQAS  468
                L +I  L  VT +  E IT    Q  +N+   + LNL+KN T+A LQ  NL EK  K +++P+  L FA  CH   IIH Q+ F+*+G*S S  N+  + +  P H+ALV++ F+  KS +H+C  S   I   YS +PWL II+  I Y+  QA+
Subject   4018  LRIISTLAWVTSKRYEGITANCEQT*INVTRGE*LNLVKNDTVACLQTINLPEKHLKSYHIPSLFLRFASFCHLTIIIHFQISFD*VG*SSSWGNESNKLSL*PFHEALVKETFSCPKSPEHNCQLSWLYIFRGYSGEPWL*IIELFIAYYACQAT  4485

Range 6: 4022 to 4477 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
111.5 bits(237) 0.0 64/152(42%) 0/152(0%) Minus/Plus
Query        9  A*LV**VMRNLMIPSHGFQEYQLQISNLEN*QSCLELLERAKAFCTRAL*RGLKVNS*PLFHPEGL*PIQLKGTWRWMIVAKWQRQANQREKVGTL*PLKSFSERLKI*RRAIV*FLMRFSCFLQAMLTFAC*PYGVMLSFHSPVTLVKAHM  464
                A*  ** M++ MI SHG  EY  +I + E+*Q C  LL + K   TRA *+G + +    F  + L*P Q K  W+WM++ +WQ+ AN R++ G  * L+ FS RL +*R+A V FL RFS      L + C  + VM S+   VT  K  M
Subject   4022  A*QA**AMKSSMIQSHGSPEYPRKI*SQES*QLCSGLLGQEKVSFTRAS*KGQRESLLLSFPQDEL*PTQSKEIWKWMMIVRWQKLANLRKRDGMW*LLRCFSGRLMV*RQATVSFLTRFSYSPLVTLIYVCSQFAVMPSYLLLVTHAKVLM  4477

Range 7: 4023 to 4478 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
103.7 bits(220) 0.0 64/152(42%) 0/152(0%) Minus/Plus
Query        8  LDWCDK**EI**FQAMAFRNINFKYQISRINSRAWNFWSGQKLFVQELYEEV*R*IRNLCFTQKGSSQFN*KGPGDG**LQSGKGRQIKERRLGRCDL*RVSQKD*KSEGGPLCDF**GSAVSSRLC*RLPVNHTE*CFHFTRR*PLSKHI*  463
                LD  +K *++ *F+AMA RNI+ +Y+  R++S A +FW  +K  +QEL+E+V   +    F +   SQ N K  G+G**L  GK  QI ER +G  + * VSQ+ *  EG PL  F* GSA+   L * +  ++++*C H +  *P+ K++*
Subject   4023  LDRRNKR*KVQ*FKAMALRNIHERYKAKRVDSCARDFWGRKKFPLQELHEKVRGKVCYFRFPKTSFSQLNQKRSGNG**L*GGKSWQI*ERGMGCGNF*GVSQEG*WFEGRPLYHF*RGSAIPPWLH*FMFAHNSQ*CLHISCW*PMPKYL*  4478

Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome

Sequence ID: KR054734.1 Length: 8753 Number of Matches: 7

Range 1: 4021 to 4485 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
357.6 bits(774) 0.0 148/155(95%) 0/155(0%) Minus/Plus
Query        1  GLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKREGWDVVTFEEFLRKIENLKAGHCVIFDEVQLFPPGYVDVCLLTIRSDAFISLAGDPCQSTYDTQ  465
                GLTGVISDEKFNDSKPWLSGISTS+IKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSK+EGWDVVTFE FLRKI NLKAGHCVIFDEVQLFPPGY+D+CLLTIRSDAFISLAGDPCQSTYD+Q
Subject   4021  GLTGVISDEKFNDSKPWLSGISTSDIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKIANLKAGHCVIFDEVQLFPPGYIDLCLLTIRSDAFISLAGDPCQSTYDSQ  4485

Range 2: 4027 to 4485 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
271.4 bits(586) 0.0 118/153(77%) 0/153(0%) Plus/Minus
Query        1  LGVICALTRVTGE*NESITPYG*QANVNIAWRKQLNLIKNHTMARLQIFNLSEKLFKGHNVPTFSL*FACLCHFATIIHLQVPFN*IG*SPSG*NKGYEFTFRPLHKALVQKAFARSKSSKHDC*FSRFDI*S*YS*KPWLGIIKFLITYHTS  459
                LGVICALT +T + NESIT YG*Q  VNIAWR+QLNLIKN  MA LQ+ N  +K FKGHNVPTF  *FA LCHFATIIH QV FN*I *SPSG*NKGYEF FRPLHKALVQKAF  SK +KHDC  SRFDI S*YS*+PWLGI+K LITYHTS
Subject   4027  LGVICALTGITSKRNESITSYG*QTKVNIAWREQLNLIKNDAMACLQVCNFPKKHFKGHNVPTFFF*FASLCHFATIIHFQVSFN*IC*SPSG*NKGYEFAFRPLHKALVQKAFTSSKGAKHDCQLSRFDIRS*YS*EPWLGIVKLLITYHTS  4485

Range 3: 4022 to 4483 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
257.7 bits(556) 0.0 119/154(77%) 0/154(0%) Minus/Plus
Query        3  A*LV**VMRNLMIPSHGFQEYQLQISNLEN*QSCLELLERAKAFCTRAL*RGLKVNS*PLFHPEGL*PIQLKGTWRWMIVAKWQRQANQREKVGTL*PLKSFSERLKI*RRAIV*FLMRFSCFLQAMLTFAC*PYGVMLSFHSPVTLVKAHMTP  464
                A*LV**VMR+L IPSHG QEYQL ISNLE+*QSCL  LE  KAFCTRAL*RGLK NS*PLFHPEGL* IQLK TW+WMIVAKWQR ANQ++KVGTL*PLK F  +L+ *R+AI  FLMRF+C LQA+LTF C*PY VMLSF   V  VKAHMTP
Subject   4022  A*LV**VMRSLTIPSHGSQEYQLLISNLES*QSCLAPLELVKAFCTRAL*RGLKANS*PLFHPEGL*QIQLKETWKWMIVAKWQRLANQKKKVGTL*PLKCFLGKLQT*RQAIASFLMRFNCSLQAILTFVC*PYEVMLSFLLLVIPVKAHMTP  4483

Range 4: 4023 to 4484 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
238.4 bits(514) 0.0 115/154(75%) 0/154(0%) Minus/Plus
Query        2  LDWCDK**EI**FQAMAFRNINFKYQISRINSRAWNFWSGQKLFVQELYEEV*R*IRNLCFTQKGSSQFN*KGPGDG**LQSGKGRQIKERRLGRCDL*RVSQKD*KSEGGPLCDF**GSAVSSRLC*RLPVNHTE*CFHFTRR*PLSKHI*HP  463
                L+WCDK**E+* FQAMA RNINF YQISR++SRAW+ WS  KL VQELYEEV*R IRNLCFTQKGSS+FN*K  G+G**LQSGKG QIK+RRLGRCDL* VS ++ K EG PL  F**GS V SRL * L VNHT+*CFHF+  * LSKHI* P
Subject   4023  LNWCDK**EV*RFQAMALRNINF*YQISRVDSRAWHLWSW*KLSVQELYEEV*RQIRNLCFTQKGSSKFN*KRLGNG**LQSGKGWQIKKRRLGRCDL*SVS*ENCKPEGRPLRHF**GSTVPSRLY*PLSVNHTK*CFHFSCW*SLSKHI*LP  4484

Range 5: 4020 to 4370 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
185.3 bits(398) 0.0 109/117(93%) 0/117(0%) Plus/Minus
Query      116  KITQWPAFRFSIFLRNSSKVTTSQPSLFDLPAFATXXXXXXXXXXXXXXARALLGETKVTNLPSDLFIXXXXXXXXXXXXXXSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKP  466
                K+TQWPAFRF+IFLRN+SKVTTSQPS FDLPAFATLQLSSIS+SLLIE ARALLGETKVTNLPSDLFIKLLY+KLLPAPKVPSTTVNSRDLI EVDIPESHGLESLNFSSLITPVKP
Subject   4020  KMTQWPAFRFAIFLRNTSKVTTSQPSFFDLPAFATLQLSSISKSLLIEFARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLISEVDIPESHGLESLNFSSLITPVKP  4370

Range 6: 4410 to 4484 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.8 bits(111) 0.0 23/25(92%) 0/25(0%) Plus/Minus
Query        2  WVSYVL*QGSPASEMKASLRMVNRQ  76
                W SYVL*QGSPA EMKASLRMVNRQ
Subject   4410  WESYVL*QGSPAREMKASLRMVNRQ  4484

Range 7: 4118 to 4483 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
161.0 bits(345) 0.0 91/122(75%) 0/122(0%) Plus/Minus
Query        3  GCHMCFDKGHRRVK*KHHSVWLTGKRQHSLEETAEPHQKSHNGPPSDFQSF*ETLQRSQRXXXXXXXXXXXXXXXYHPSPGPF*LNWLEPFWVKQRLRIYLQTXXXXXCTKSFCPLQKFQAR  368
                G HMCFD+ H++ K*KHH VWLT K Q+SLE T EPHQK  NG PS  Q  *ETLQRSQRPNLL LIC PLPLCNYHP P  F*LN LEPFWVKQRLRI LQTSS*SSCT+SF  LQ+ QAR
Subject   4118  GSHMCFDRDHQQEK*KHHFVWLTDKGQYSLEGTVEPHQK*RNGLPSGLQFS*ETLQRSQRPNLLFLICQPLPLCNYHPFPSLF*LNLLEPFWVKQRLRICLQTSS*SSCTESFYQLQRCQAR  4483

Nucleotide Sequence (332 letters)

Query ID:ds2016-57_12
Query definition:No definition line
Query length:638
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 8 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
34
68
102
136
170
204
238
272
306
332

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome

Sequence ID: KR054734.1 Length: 8753 Number of Matches: 6

Range 1: 7048 to 7377 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
261.3 bits(564) 0.0 105/110(95%) 0/110(0%) Plus/Minus
Query        3  GSW*ILSPEYGRFDFLKKCRTNPMPKPIVNGVMVLAQ*AGC*KGILLHYYQFTSMPCGCNVEPMLIF*SWIPGLQ*RHNVKC*TPHLAGQFEVRIVCNC*IYGLLSKANE  332
                G+W*ILSPEYGRFDFLKKCRTNPMPKPIVNGVMVLAQ AGC*KGILLHYYQFTSMPCGCNVEPMLIF*SWIPGLQ*RHNVKC*TPH AGQ EVRIVCNC*+YGLLSKANE
Subject   7048  GNW*ILSPEYGRFDFLKKCRTNPMPKPIVNGVMVLAQLAGC*KGILLHYYQFTSMPCGCNVEPMLIF*SWIPGLQ*RHNVKC*TPHFAGQLEVRIVCNC*VYGLLSKANE  7377

Range 2: 7048 to 7377 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
255.4 bits(551) 0.0 105/110(95%) 0/110(0%) Minus/Plus
Query        3  LICFGKEAVDLAVAHNSDFKLPCEVRGSTFNVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*NAFSATCLLG*DHNSINYWFGHWVGSALLKEIKSTIFRRQYSPAP  332
                LICFGKEAVDLAVAHNSDFKLPCEVRGSTF+VVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*NAFSAT  LG*+HNSINYWFGHWVGSALLKEIKSTIFRRQYSP P
Subject   7048  LICFGKEAVDLAVAHNSDFKLPCEVRGSTFDVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*NAFSATSQLG*NHNSINYWFGHWVGSALLKEIKSTIFRRQYSPVP  7377

Range 3: 7050 to 7379 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
248.5 bits(536) 0.0 104/110(95%) 0/110(0%) Minus/Plus
Query        1  HLLWKGGRRSSSCTQF*LQIALRGAGFNI*RCDVIEVQGSNFRR*ALVLRCSHKASK*TDNNAVKCLFSNLPTGLRP*LH*LLVWALGWFCTS*GNQIYHIQETIFTSSH  330
                HLLWKGGRR SSCTQF*LQ+ALR AGFNI*RCDVIEVQGSNFRR*ALVLRCSHKASK* DNNAVKCLFSN PTGL+P*LH*LLVWALGWFCTS*GNQIYHIQETIFTSSH
Subject   7050  HLLWKGGRRPSSCTQF*LQVALRSAGFNI*RCDVIEVQGSNFRR*ALVLRCSHKASK*IDNNAVKCLFSNQPTGLKP*LH*LLVWALGWFCTS*GNQIYHIQETIFTSSH  7379

Range 4: 7049 to 7378 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
244.4 bits(527) 0.0 105/110(95%) 0/110(0%) Minus/Plus
Query        2  SFALERRP*I*QLHTILTSNCPARCGVQHLTL*RY*SPGIQLQKISIGSTLQPQGIEVN***CSKMPFQQPAYWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQLP  331
                SFALERRP* *QLHTILTS+CPA+CGVQHLTL*RY*SPGIQLQKISIGSTLQPQGIEVN***CSKMPFQQPA WAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQ P
Subject   7049  SFALERRP*T*QLHTILTSSCPAKCGVQHLTL*RY*SPGIQLQKISIGSTLQPQGIEVN***CSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFP  7378

Range 5: 7050 to 7379 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
240.3 bits(518) 0.0 104/110(95%) 0/110(0%) Plus/Minus
Query        1  VGAGEYCLLNMVDLISLRSAEPTQCPNQ*LMELWS*PSRQVAEKAFYCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTLNVEPRTSQGNLKSELCATARSTASFPKQM  330
                VG GEYCLLNMVDLISLRSAEPTQCPNQ*LMELW *PS  VAEKAFYCIII+LLRCLVAAT*NQCLSSEVGSLDFNNVTT NVEPRTSQGNLKSELCATARSTASFPKQM
Subject   7050  VGTGEYCLLNMVDLISLRSAEPTQCPNQ*LMELWF*PSWLVAEKAFYCIIINLLRCLVAAT*NQCLSSEVGSLDFNNVTTSNVEPRTSQGNLKSELCATARSTASFPKQM  7379

Range 6: 7049 to 7378 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
237.5 bits(512) 0.0 103/110(94%) 0/110(0%) Plus/Minus
Query        2  WELVNIVS*IW*I*FP*EVQNQPNAQTNS*WSYGLSPVGRLLKRHFTALLSVYFDALWLQRRTNAYLLKLDPWTSITSQR*MLNPAPRRAI*SQNCVQLLDLRPPFQSK*  331
                WELVNIVS*IW*I*FP*EVQNQPNAQTNS*WSYG SPVG LLKRHFTALLS+YFDALWLQRRTNAYLLKLDPWTSITSQR MLNPA RRA *SQNCVQLL LRPPFQSK*
Subject   7049  WELVNIVS*IW*I*FP*EVQNQPNAQTNS*WSYGFSPVGWLLKRHFTALLSIYFDALWLQRRTNAYLLKLDPWTSITSQRQMLNPALRRAT*SQNCVQLLGLRPPFQSK*  7378

Rupestris stem pitting associated virus isolate RSP47 4 replicase gene, partial cds; triple gene block protein 1, triple gene block protein 2, and triple gene block protein 3 genes, complete cds; and capsid protein gene, partial cds

Sequence ID: EF105294.1 Length: 2680 Number of Matches: 6

Range 1: 1328 to 1657 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
260.0 bits(561) 0.0 106/110(96%) 0/110(0%) Minus/Plus
Query        3  LICFGKEAVDLAVAHNSDFKLPCEVRGSTFNVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*NAFSATCLLG*DHNSINYWFGHWVGSALLKEIKSTIFRRQYSPAP  332
                LICFGKEAVDLAVAHNSDFKLPCEVRGSTF+VVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*NAFSATC LG*DHNSINYWFGHWVGSALLKEIKS IFRRQYSP P
Subject   1328  LICFGKEAVDLAVAHNSDFKLPCEVRGSTFDVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*NAFSATCQLG*DHNSINYWFGHWVGSALLKEIKSAIFRRQYSPVP  1657

Range 2: 1328 to 1657 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
258.1 bits(557) 0.0 105/110(95%) 0/110(0%) Plus/Minus
Query        3  GSW*ILSPEYGRFDFLKKCRTNPMPKPIVNGVMVLAQ*AGC*KGILLHYYQFTSMPCGCNVEPMLIF*SWIPGLQ*RHNVKC*TPHLAGQFEVRIVCNC*IYGLLSKANE  332
                G+W*ILSPEYGRFDFLKKCRTNPMPKPIVNGVMVLAQ AGC*KGILLHYYQFTSMPCGCNVEPMLIF*SWIPGLQ*R+NVKC*TPHLAGQ EVRIVCNC*IY LLSKANE
Subject   1328  GNW*ILSPEYGRFDFLKKCRTNPMPKPIVNGVMVLAQLAGC*KGILLHYYQFTSMPCGCNVEPMLIF*SWIPGLQ*RYNVKC*TPHLAGQLEVRIVCNC*IYSLLSKANE  1657

Range 3: 1330 to 1659 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
250.3 bits(540) 0.0 106/110(96%) 0/110(0%) Minus/Plus
Query        1  HLLWKGGRRSSSCTQF*LQIALRGAGFNI*RCDVIEVQGSNFRR*ALVLRCSHKASK*TDNNAVKCLFSNLPTGLRP*LH*LLVWALGWFCTS*GNQIYHIQETIFTSSH  330
                HLLWKGG RSSSCTQF*LQ+ALRGAGFNI*RC+VIEVQGSNFRR*ALVLRCSHKASK*TDNNAVKCLFSNLPTGLRP*LH*LLVWALGWFCTS*GNQI HIQETIFTSSH
Subject   1330  HLLWKGGCRSSSCTQF*LQVALRGAGFNI*RCNVIEVQGSNFRR*ALVLRCSHKASK*TDNNAVKCLFSNLPTGLRP*LH*LLVWALGWFCTS*GNQICHIQETIFTSSH  1659

Range 4: 1330 to 1659 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
245.8 bits(530) 0.0 106/110(96%) 0/110(0%) Plus/Minus
Query        1  VGAGEYCLLNMVDLISLRSAEPTQCPNQ*LMELWS*PSRQVAEKAFYCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTLNVEPRTSQGNLKSELCATARSTASFPKQM  330
                VG GEYCLLNM DLISLRSAEPTQCPNQ*LMELWS*PS QVAEKAFYCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTT NVEPRTSQGNLKSELCATARSTASFPKQM
Subject   1330  VGTGEYCLLNMADLISLRSAEPTQCPNQ*LMELWS*PSWQVAEKAFYCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTSNVEPRTSQGNLKSELCATARSTASFPKQM  1659

Range 5: 1329 to 1658 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
244.4 bits(527) 0.0 105/110(95%) 0/110(0%) Plus/Minus
Query        2  WELVNIVS*IW*I*FP*EVQNQPNAQTNS*WSYGLSPVGRLLKRHFTALLSVYFDALWLQRRTNAYLLKLDPWTSITSQR*MLNPAPRRAI*SQNCVQLLDLRPPFQSK*  331
                WELVNIVS*IW I*FP*EVQNQPNAQTNS*WSYGLSPVGRLLKRHFTALLSVYFDALWLQRRTNAYLLKLDPWTSIT QR MLNPAPRRA *SQNCVQLLDL+PPFQSK*
Subject   1329  WELVNIVS*IWQI*FP*EVQNQPNAQTNS*WSYGLSPVGRLLKRHFTALLSVYFDALWLQRRTNAYLLKLDPWTSITLQRQMLNPAPRRAT*SQNCVQLLDLQPPFQSK*  1658

Range 6: 1329 to 1658 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
243.5 bits(525) 0.0 106/110(96%) 0/110(0%) Minus/Plus
Query        2  SFALERRP*I*QLHTILTSNCPARCGVQHLTL*RY*SPGIQLQKISIGSTLQPQGIEVN***CSKMPFQQPAYWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQLP  331
                SFALERR *I*QLHTILTS+CPARCGVQHLTL*RY*SPGIQLQKISIGSTLQPQGIEVN***CSKMPFQQPA WAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQ P
Subject   1329  SFALERRL*I*QLHTILTSSCPARCGVQHLTL*RY*SPGIQLQKISIGSTLQPQGIEVN***CSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFP  1658

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: Ham1

Sequence ID: AB277788.1 Length: 2876 Number of Matches: 6

Range 1: 1304 to 1633 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
255.8 bits(552) 0.0 104/110(95%) 0/110(0%) Plus/Minus
Query        3  GSW*ILSPEYGRFDFLKKCRTNPMPKPIVNGVMVLAQ*AGC*KGILLHYYQFTSMPCGCNVEPMLIF*SWIPGLQ*RHNVKC*TPHLAGQFEVRIVCNC*IYGLLSKANE  332
                G+W*ILSPEYGRFDFLKKCRTNPMPKPIVNGVMVLAQ AGC*KGILLHYYQFTSMPCGCNVEPMLIF SWIPGLQ*RH VKC*TPH AGQ EVRIVCNC*IYGLLSKANE
Subject   1304  GNW*ILSPEYGRFDFLKKCRTNPMPKPIVNGVMVLAQLAGC*KGILLHYYQFTSMPCGCNVEPMLIFWSWIPGLQ*RHYVKC*TPHFAGQLEVRIVCNC*IYGLLSKANE  1633

Range 2: 1304 to 1633 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
255.8 bits(552) 0.0 105/110(95%) 0/110(0%) Minus/Plus
Query        3  LICFGKEAVDLAVAHNSDFKLPCEVRGSTFNVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*NAFSATCLLG*DHNSINYWFGHWVGSALLKEIKSTIFRRQYSPAP  332
                LICFGKEAVDLAVAHNSDFKLPCEVRGSTF+VVTLLKSRDPT EDKHWFYVAATRHRSKLIIMQ*NAFSATC LG*DHNSINYWFGHWVGSALLKEIKSTIFRR YSP P
Subject   1304  LICFGKEAVDLAVAHNSDFKLPCEVRGSTFDVVTLLKSRDPTPEDKHWFYVAATRHRSKLIIMQ*NAFSATCQLG*DHNSINYWFGHWVGSALLKEIKSTIFRR*YSPVP  1633

Range 3: 1306 to 1635 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
243.9 bits(526) 0.0 104/110(95%) 0/110(0%) Minus/Plus
Query        1  HLLWKGGRRSSSCTQF*LQIALRGAGFNI*RCDVIEVQGSNFRR*ALVLRCSHKASK*TDNNAVKCLFSNLPTGLRP*LH*LLVWALGWFCTS*GNQIYHIQETIFTSSH  330
                HLLWKGGRRSSSCTQF*LQ+ALR AGFNI*R DVIEVQGSN RR*ALVLRCSHKASK* DNNAVKCLFSNLPTGLRP*LH*LLVWALGWFCTS*GNQIYHIQE IFTSSH
Subject   1306  HLLWKGGRRSSSCTQF*LQVALRSAGFNI*RSDVIEVQGSNSRR*ALVLRCSHKASK*IDNNAVKCLFSNLPTGLRP*LH*LLVWALGWFCTS*GNQIYHIQEIIFTSSH  1635

Range 4: 1305 to 1634 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
243.0 bits(524) 0.0 105/110(95%) 0/110(0%) Minus/Plus
Query        2  SFALERRP*I*QLHTILTSNCPARCGVQHLTL*RY*SPGIQLQKISIGSTLQPQGIEVN***CSKMPFQQPAYWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQLP  331
                SFALERRP*I*QLHTILTS+CPA+CGVQHLT *RY*SPGIQLQKISIGSTLQPQGIEVN***CSKMPFQQPA WAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQ P
Subject   1305  SFALERRP*I*QLHTILTSSCPAKCGVQHLT**RY*SPGIQLQKISIGSTLQPQGIEVN***CSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFP  1634

Range 5: 1305 to 1634 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
240.7 bits(519) 0.0 103/110(94%) 0/110(0%) Plus/Minus
Query        2  WELVNIVS*IW*I*FP*EVQNQPNAQTNS*WSYGLSPVGRLLKRHFTALLSVYFDALWLQRRTNAYLLKLDPWTSITSQR*MLNPAPRRAI*SQNCVQLLDLRPPFQSK*  331
                WELVNI+S*IW*I*FP*EVQNQPNAQTNS*WSYGLSPVGRLLKRHFTALLS+YFDALWLQRRTNAYLL+LDPWTSITS R MLNPA RRA *SQNCVQLLDLRPPFQSK*
Subject   1305  WELVNIIS*IW*I*FP*EVQNQPNAQTNS*WSYGLSPVGRLLKRHFTALLSIYFDALWLQRRTNAYLLELDPWTSITSLRQMLNPALRRAT*SQNCVQLLDLRPPFQSK*  1634

Range 6: 1306 to 1635 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
238.0 bits(513) 0.0 104/110(95%) 0/110(0%) Plus/Minus
Query        1  VGAGEYCLLNMVDLISLRSAEPTQCPNQ*LMELWS*PSRQVAEKAFYCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTLNVEPRTSQGNLKSELCATARSTASFPKQM  330
                VG GEY LLNMVDLISLRSAEPTQCPNQ*LMELWS*PS QVAEKAFYCIII+LLRCLVAAT*NQCLSS VGSLDFNNVTT NVEPRTSQGNLKSELCATARSTASFPKQM
Subject   1306  VGTGEYYLLNMVDLISLRSAEPTQCPNQ*LMELWS*PSWQVAEKAFYCIIINLLRCLVAAT*NQCLSSGVGSLDFNNVTTSNVEPRTSQGNLKSELCATARSTASFPKQM  1635

Grapevine rupestris stem pitting associated virus isolate ML replicase polyprotein gene, partial cds; triple gene block protein 1 (TGB1), triple gene block protein 2 (TGB2), and triple gene block protein 3 (TGB3) genes, complete cds; and capsid protein gene, partial cds

Sequence ID: KU324634.1 Length: 2653 Number of Matches: 6

Range 1: 1345 to 1674 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
235.7 bits(508) 0.0 95/110(86%) 0/110(0%) Plus/Minus
Query        3  GSW*ILSPEYGRFDFLKKCRTNPMPKPIVNGVMVLAQ*AGC*KGILLHYYQFTSMPCGCNVEPMLIF*SWIPGLQ*RHNVKC*TPHLAGQFEVRIVCNC*IYGLLSKANE  332
                G+W*ILSPEYGRFDFLKKCRTNPMPKP+V+GV+VLAQ AGC*KGILLHYYQF SMPC CNVEPMLIF SW+PGLQ*RH+VKC*TPH A Q EV IVCNC IYGLLSKANE
Subject   1345  GNW*ILSPEYGRFDFLKKCRTNPMPKPMVSGVIVLAQSAGC*KGILLHYYQFASMPCCCNVEPMLIFRSWVPGLQ*RHDVKC*TPHFARQLEVGIVCNCKIYGLLSKANE  1674

Range 2: 1345 to 1674 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
235.2 bits(507) 0.0 95/110(86%) 0/110(0%) Minus/Plus
Query        3  LICFGKEAVDLAVAHNSDFKLPCEVRGSTFNVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*NAFSATCLLG*DHNSINYWFGHWVGSALLKEIKSTIFRRQYSPAP  332
                LICFGKEAVDLAVAHNSDFKLPCEVRGSTFNVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*+AFSATC LG*D+NS N+WFGHWV    L+++KS IFR QYSP P
Subject   1345  LICFGKEAVDLAVAHNSDFKLPCEVRGSTFNVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*DAFSATCRLG*DNNSTNHWFGHWVSPTFLEKVKSAIFR*QYSPVP  1674

Range 3: 1346 to 1675 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
222.4 bits(479) 0.0 98/110(89%) 0/110(0%) Minus/Plus
Query        2  SFALERRP*I*QLHTILTSNCPARCGVQHLTL*RY*SPGIQLQKISIGSTLQPQGIEVN***CSKMPFQQPAYWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQLP  331
                SFALERRP*I QLHTI TS+C A+CGVQHLT *RY*SPG QL KISIGSTLQ QGIE N***CSKMPFQQPA WAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQ P
Subject   1346  SFALERRP*ILQLHTIPTSSCLAKCGVQHLTS*RY*SPGTQLLKISIGSTLQQQGIEAN***CSKMPFQQPADWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFP  1675

Range 4: 1347 to 1676 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
216.4 bits(466) 0.0 96/110(87%) 0/110(0%) Plus/Minus
Query        1  VGAGEYCLLNMVDLISLRSAEPTQCPNQ*LMELWS*PSRQVAEKAFYCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTLNVEPRTSQGNLKSELCATARSTASFPKQM  330
                VG GEYC LNM DL   R+   TQCPNQ L+EL S*PSRQVAEKA YCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTLNVEPRTSQGNLKSELCATARSTASFPKQM
Subject   1347  VGTGEYCHLNMADLTFSRNVGLTQCPNQWLVELLS*PSRQVAEKASYCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTLNVEPRTSQGNLKSELCATARSTASFPKQM  1676

Range 5: 1347 to 1676 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
195.8 bits(421) 0.0 90/110(82%) 0/110(0%) Minus/Plus
Query        1  HLLWKGGRRSSSCTQF*LQIALRGAGFNI*RCDVIEVQGSNFRR*ALVLRCSHKASK*TDNNAVKCLFSNLPTGLRP*LH*LLVWALGWFCTS*GNQIYHIQETIFTSSH  330
                HLLWKGGRRS SCTQF LQ+ALR AGFNI*R DVIEVQG NF R*ALVLRCS+KASK TDNNAV+CLFSNLPTGLR *LH* LVWALG    S* +QI HIQ TIFTSSH
Subject   1347  HLLWKGGRRSCSCTQFRLQVALRSAGFNI*RRDVIEVQGPNF*R*ALVLRCSNKASKQTDNNAVRCLFSNLPTGLRQ*LH*PLVWALG*SYIS*ESQICHIQVTIFTSSH  1676

Range 6: 1346 to 1675 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
192.1 bits(413) 0.0 88/110(80%) 0/110(0%) Plus/Minus
Query        2  WELVNIVS*IW*I*FP*EVQNQPNAQTNS*WSYGLSPVGRLLKRHFTALLSVYFDALWLQRRTNAYLLKLDPWTSITSQR*MLNPAPRRAI*SQNCVQLLDLRPPFQSK*  331
                WELVNIV+*IW I*   E+ + PNAQTN *WSY LSPVGRLLKRH TALLSV FDAL LQRRTNAYL KL PWTSITS+R*MLNPA R+A *S+NCVQL DLRPPFQSK*
Subject   1346  WELVNIVT*IWQI*LSQEM*D*PNAQTNG*WSYCLSPVGRLLKRHLTALLSVCFDALLLQRRTNAYLQKLGPWTSITSRR*MLNPALRKAT*SRNCVQLQDLRPPFQSK*  1675

Grapevine rupestris stem pitting associated virus isolate SK704 A, complete genome

Sequence ID: KX274274.1 Length: 8725 Number of Matches: 6

Range 1: 7048 to 7377 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
235.7 bits(508) 0.0 96/110(87%) 0/110(0%) Plus/Minus
Query        3  GSW*ILSPEYGRFDFLKKCRTNPMPKPIVNGVMVLAQ*AGC*KGILLHYYQFTSMPCGCNVEPMLIF*SWIPGLQ*RHNVKC*TPHLAGQFEVRIVCNC*IYGLLSKANE  332
                G+W*ILSPEYG+FDFLKKCRTNPMPKP+VNGV+VLAQ AGC KGILLHYYQF SMPC CNVEPMLIF*SW+P LQ*RHNVKC*TPHL GQ EV IV NC*IYGLLSKANE
Subject   7048  GNW*ILSPEYGKFDFLKKCRTNPMPKPMVNGVIVLAQLAGCWKGILLHYYQFASMPCCCNVEPMLIF*SWVPRLQ*RHNVKC*TPHLTGQLEVGIVRNC*IYGLLSKANE  7377

Range 2: 7048 to 7371 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
233.4 bits(503) 0.0 94/108(87%) 0/108(0%) Minus/Plus
Query        9  LICFGKEAVDLAVAHNSDFKLPCEVRGSTFNVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*NAFSATCLLG*DHNSINYWFGHWVGSALLKEIKSTIFRRQYSP  332
                LICFGKEAVDLAVAHNSDFKLPCEVRGSTFNVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*+AF ATC LG*D+NSIN+W GHW+GS LL+++K  IFR QYSP
Subject   7048  LICFGKEAVDLAVAHNSDFKLPCEVRGSTFNVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*DAFPATCQLG*DYNSINHWLGHWIGSTLLEKVKFAIFR*QYSP  7371

Range 3: 7049 to 7378 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
227.0 bits(489) 0.0 100/110(91%) 0/110(0%) Minus/Plus
Query        2  SFALERRP*I*QLHTILTSNCPARCGVQHLTL*RY*SPGIQLQKISIGSTLQPQGIEVN***CSKMPFQQPAYWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQLP  331
                SFALERRP*I*QL TI TS+CP RCGVQHLTL*RY*S G QLQKISIGSTLQ QGIE N***CSKMPFQQPA WAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQ P
Subject   7049  SFALERRP*I*QLRTIPTSSCPVRCGVQHLTL*RY*SLGTQLQKISIGSTLQQQGIEAN***CSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFP  7378

Range 4: 7050 to 7379 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
208.6 bits(449) 0.0 94/110(85%) 0/110(0%) Plus/Minus
Query        1  VGAGEYCLLNMVDLISLRSAEPTQCPNQ*LMELWS*PSRQVAEKAFYCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTLNVEPRTSQGNLKSELCATARSTASFPKQM  330
                V  GEYC LNM +L   RS EP QCP+Q LMEL S*PS QVA KA YCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTLNVEPRTSQGNLKSELCATARSTASFPKQM
Subject   7050  VETGEYCHLNMANLTFSRSVEPIQCPSQWLMEL*S*PSWQVAGKASYCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTLNVEPRTSQGNLKSELCATARSTASFPKQM  7379

Range 5: 7050 to 7379 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
200.8 bits(432) 0.0 90/110(82%) 0/110(0%) Minus/Plus
Query        1  HLLWKGGRRSSSCTQF*LQIALRGAGFNI*RCDVIEVQGSNFRR*ALVLRCSHKASK*TDNNAVKCLFSNLPTGLRP*LH*LLVWALGWFCTS*GNQIYHIQETIFTSSH  330
                HLLWKGGRRSSSC QF LQ+AL GAGFNI*RCDVIEV G NFRR*ALVLRCS+KASK TDNNAV+CL SNLPTGLR *LH* L WAL WF TS* +QI HIQ TIFTS H
Subject   7050  HLLWKGGRRSSSCAQFRLQVAL*GAGFNI*RCDVIEV*GPNFRR*ALVLRCSNKASKQTDNNAVRCLSSNLPTGLRL*LH*PLAWALDWFYTS*ESQICHIQVTIFTSFH  7379

Range 6: 7049 to 7378 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.0 bits(417) 0.0 89/110(81%) 0/110(0%) Plus/Minus
Query        2  WELVNIVS*IW*I*FP*EVQNQPNAQTNS*WSYGLSPVGRLLKRHFTALLSVYFDALWLQRRTNAYLLKLDPWTSITSQR*MLNPAPRRAI*SQNCVQLLDLRPPFQSK*  331
                W+LVNIV+*IW I*   EV NQ NAQ N *WSY LSPVGRLL+RH TALLSV FDAL LQRRTNAYLLKL P TSITSQR*MLNPAP RA *S+NC QLLDLRPPFQSK*
Subject   7049  WKLVNIVT*IWQI*LSQEV*NQSNAQANG*WSYSLSPVGRLLERHLTALLSVCFDALLLQRRTNAYLLKLGP*TSITSQR*MLNPAPHRAT*SRNCAQLLDLRPPFQSK*  7378

Nucleotide Sequence (459 letters)

Query ID:ds2016-57_12
Query definition:No definition line
Query length:638
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 8 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
46
92
138
184
230
276
322
368
414
459

Descriptions

Alignments

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OB1

Sequence ID: AB277783.1 Length: 2876 Number of Matches: 7

Range 1: 581 to 1000 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
320.0 bits(692) 0.0 134/140(96%) 0/140(0%) Plus/Minus
Query       39  GMRGRKGYETLVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQPRN*APHLVLISN*EPHTVVVCFNFLFIHHFN*QLAQPVGIGYLNCIVINAVLQVTHFTSNANSLIN  458
                G  GRKGYETLVLSDKFSY*T FTTTRNA+NNNWKSEHAINTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQPRN*APHLV ISN*EPHTVVVCFNFLFIHHFN*QLAQPVGIGYLNCIVINAVLQVTHFTSNANSL N
Subject    581  GNAGRKGYETLVLSDKFSY*TAFTTTRNAVNNNWKSEHAINTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQPRN*APHLVFISN*EPHTVVVCFNFLFIHHFN*QLAQPVGIGYLNCIVINAVLQVTHFTSNANSLPN  1000

Range 2: 581 to 991 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
318.6 bits(689) 0.0 133/137(97%) 0/137(0%) Minus/Plus
Query       48  IYERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTA  458
                I+ERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALS+WHGVIIMNNLVKALSTFEFVG+YSVLRFPVVVHSVPGSGKSSLIREL+TEDESFIAFTA
Subject    581  IWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHGVIIMNNLVKALSTFEFVGIYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTA  991

Range 3: 582 to 992 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
300.7 bits(650) 0.0 130/137(95%) 0/137(0%) Plus/Minus
Query       47  RP*RL*NSRPQ**VLLLNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*LGTAHSCSVLQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFHEQCKFSHK  457
                RP*RL*NSRPQ* VLLLN FYHYQER EQQLEI*ARYK+PQTQT*TKL*LSYS**SHHAK+LRPNL*LQTTQKLSTSSC YF*LGTAHSCSVLQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFHEQCKFS K
Subject    582  RP*RL*NSRPQ*QVLLLNCFYHYQERCEQQLEI*ARYKYPQTQT*TKL*LSYS**SHHAKYLRPNL*LQTTQKLSTSSCVYF*LGTAHSCSVLQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFHEQCKFSPK  992

Range 4: 589 to 993 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
255.4 bits(551) 0.0 129/135(96%) 0/135(0%) Minus/Plus
Query       46  ENLHCS*NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*STLQLCAVPS*K*AQDEVLNFWVV*SYRLGLKCLAWCDYYE*LS*SFVYV*VCGCL*RAQIXXXXXXXXXXW*K*FNKRTYH*GREFHSLYGR  450
                ENLHCS*NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*STLQLCAVPS*K* QDEVLNFWVV*SYRLGLK LAWCDYYE*LS*SFVYV*VCG L*RAQISSCCS RSW*W*K FNKRT H*GREFHSLYGR
Subject    589  ENLHCS*NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*STLQLCAVPS*K*TQDEVLNFWVV*SYRLGLKYLAWCDYYE*LS*SFVYV*VCGYL*RAQISSCCSQRSW*W*KQFNKRTCH*GREFHSLYGR  993

Range 5: 582 to 827 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
184.4 bits(396) 0.0 80/82(98%) 0/82(0%) Minus/Plus
Query      212  FMREFALLVKWVTWRTALITMQLRYPMPTGWASCQLK**MKRKLKHTTTVCGS*LEISTR*GAQFLGCLKL*IRP*VFGMV*  457
                F REFALLVKWVTWRTALITMQLRYPMPTGWASCQLK**MKRKLKHTTTVCGS*LEI+TR*GAQFLGCLKL*IRP*VFGMV*
Subject    582  FGREFALLVKWVTWRTALITMQLRYPMPTGWASCQLK**MKRKLKHTTTVCGS*LEINTR*GAQFLGCLKL*IRP*VFGMV*  827

Range 6: 867 to 986 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
66.1 bits(138) 0.0 38/40(95%) 0/40(0%) Minus/Plus
Query       53  SLWVFIACSDFQLLFIAFLXXXXXXX*ENLSLRTRVS*PL  172
                SLWVFIACSDFQLLF AFLVVVK V**ENLSLRTRVS*PL
Subject    867  SLWVFIACSDFQLLFTAFLVVVKAV**ENLSLRTRVS*PL  986

Range 7: 586 to 858 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.4 bits(418) 0.0 90/91(99%) 0/91(0%) Plus/Minus
Query      181  DKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISRAMQILS  453
                DKALTKLFIIITPCQ LKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISRAMQILS
Subject    586  DKALTKLFIIITPCQILKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISRAMQILS  858

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 8

Range 1: 6325 to 6735 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
312.2 bits(675) 0.0 134/137(98%) 0/137(0%) Minus/Plus
Query       48  IYERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTA  458
                I+ERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWH  IIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTA
Subject   6325  IWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHY*IIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTA  6735

Range 2: 6325 to 6744 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
280.1 bits(605) 0.0 119/140(85%) 0/140(0%) Plus/Minus
Query       39  GMRGRKGYETLVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQPRN*APHLVLISN*EPHTVVVCFNFLFIHHFN*QLAQPVGIGYLNCIVINAVLQVTHFTSNANSLIN  458
                G  GR+ YETLV S++ SY TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNN  MPNT*GLIYSFKQ RN*A HLVLISN EPHTVVV FNFLFIHHFN*QLAQPVGIG+LNCI+INA+ QV HFTSNANSL N
Subject   6325  GNAGRESYETLVFSNELSYQTTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNLIMPNT*GLIYSFKQSRN*ASHLVLISNQEPHTVVVRFNFLFIHHFN*QLAQPVGIGHLNCIIINAIFQVAHFTSNANSLPN  6744

Range 3: 6326 to 6736 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
277.4 bits(599) 0.0 120/137(88%) 0/137(0%) Plus/Minus
Query       47  RP*RL*NSRPQ**VLLLNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*LGTAHSCSVLQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFHEQCKFSHK  457
                RP*+L*NSR Q** LL NYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**S++AKHLRPNL*LQT QKLS SSCAYF* GTAHSCS LQLPLHSSFQLTTRP CRHR PQLH+YQC+ PG PFHEQCKFS K
Subject   6326  RP*KL*NSRLQ**ALLSNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SNNAKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQLPLHSSFQLTTRPTCRHRTPQLHNYQCNFPGCPFHEQCKFSPK  6736

Range 4: 6324 to 6641 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
211.4 bits(455) 0.0 95/106(90%) 0/106(0%) Minus/Plus
Query      142  DL*ENLHCS*NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*STLQLCAVPS*K*AQDEVLNFWVV*SYRLGLKCLAWCDYYE*LS*SFVYV*VCGCL*RAQI  459
                DL ENLHCS*NG PG+LH**LCN*G+LCLQ GRVVN*NDE*RGS*S LQLCAVP *K*AQDE+LNFW+V*SYRLGLKCLA  DYYE*LS*SFVYV*VCGCL*RAQI
Subject   6324  DLGENLHCS*NGQPGKLH**LCN*GVLCLQVGRVVN*NDE*RGS*SALQLCAVPG*K*AQDEMLNFWIV*SYRLGLKCLALLDYYE*LS*SFVYV*VCGCL*RAQI  6641

Range 5: 6675 to 6737 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.1 bits(68) 0.0 14/21(67%) 0/21(0%) Minus/Plus
Query       46  *K*FNKRTYH*GREFHSLYGR  108
                *K*F+KR ++* REFHS +GR
Subject   6675  *K*FDKRAHY*RREFHSFHGR  6737

Range 6: 6326 to 6568 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
157.8 bits(338) 0.0 69/81(85%) 0/81(0%) Minus/Plus
Query      215  FMREFALLVKWVTWRTALITMQLRYPMPTGWASCQLK**MKRKLKHTTTVCGS*LEISTR*GAQFLGCLKL*IRP*VFGMV  457
                F REFALLVKW TW+ ALI MQLR PMPTGWASCQLK**MKRKLK TTTVCGS LEISTR* AQFL CLKL*IRP*VFG++
Subject   6326  FGREFALLVKWATWKIALIIMQLRCPMPTGWASCQLK**MKRKLKRTTTVCGSWLEISTR*DAQFLDCLKL*IRP*VFGII  6568

Range 7: 6611 to 6724 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.2 bits(112) 0.0 34/38(89%) 0/38(0%) Minus/Plus
Query       59  SLWVFIACSDFQLLFIAFLXXXXXXX*ENLSLRTRVS*  172
                SLWVFIACSDFQLLFIAFLVVVKVV**E+  L+TRVS*
Subject   6611  SLWVFIACSDFQLLFIAFLVVVKVV**ESSLLKTRVS*  6724

Range 8: 6330 to 6602 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
186.6 bits(401) 0.0 88/91(97%) 0/91(0%) Plus/Minus
Query      181  DKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISRAMQILS  453
                DKALTKLFIII  CQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSP+L*A*DTSIA*LSMQFSRLPISRAMQILS
Subject   6330  DKALTKLFIII**CQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSMQFSRLPISRAMQILS  6602

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 8

Range 1: 6325 to 6735 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
319.5 bits(691) 0.0 134/137(98%) 0/137(0%) Plus/Minus
Query       48  GRKGYETLVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQPRN*APHLVLISN*EPHTVVVCFNFLFIHHFN*QLAQPVGIGYLNCIVINAVLQVTHFTSNANSLIN  458
                GRKGYE LVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQPRN*APHLVLISN*EPHTVVVCFNFLFIHHFN QLAQPVGIGYLNCIVINAVLQVTHFTSNANSL N
Subject   6325  GRKGYEILVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQPRN*APHLVLISN*EPHTVVVCFNFLFIHHFNCQLAQPVGIGYLNCIVINAVLQVTHFTSNANSLPN  6735

Range 2: 6325 to 6735 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
316.8 bits(685) 0.0 133/137(97%) 0/137(0%) Minus/Plus
Query       48  IYERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTA  458
                I+ERICIAREMGNLENCIDNYAIEVSYAYRLGEL+IEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIREL+TEDE+FIAFTA
Subject   6325  IWERICIAREMGNLENCIDNYAIEVSYAYRLGELAIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELVTEDENFIAFTA  6735

Range 3: 6326 to 6736 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
313.6 bits(678) 0.0 134/137(98%) 0/137(0%) Plus/Minus
Query       47  RP*RL*NSRPQ**VLLLNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*LGTAHSCSVLQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFHEQCKFSHK  457
                RP*RL*NSRPQ* VLLLNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*LGTAHSCSVLQLPLHSSFQL TRPACRHRIPQLHSYQCSSPGYPFHEQCKFS K
Subject   6326  RP*RL*NSRPQ*QVLLLNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*LGTAHSCSVLQLPLHSSFQLPTRPACRHRIPQLHSYQCSSPGYPFHEQCKFSPK  6736

Range 4: 6333 to 6641 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
228.3 bits(492) 0.0 102/103(99%) 0/103(0%) Minus/Plus
Query      142  ENLHCS*NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*STLQLCAVPS*K*AQDEVLNFWVV*SYRLGLKCLAWCDYYE*LS*SFVYV*VCGCL*RAQI  450
                ENLHCS*NG*PGELH**LCN*GILCLQAGRV N*NDE*RGS*STLQLCAVPS*K*AQDEVLNFWVV*SYRLGLKCLAWCDYYE*LS*SFVYV*VCGCL*RAQI
Subject   6333  ENLHCS*NG*PGELH**LCN*GILCLQAGRVGN*NDE*RGS*STLQLCAVPS*K*AQDEVLNFWVV*SYRLGLKCLAWCDYYE*LS*SFVYV*VCGCL*RAQI  6641

Range 5: 6675 to 6737 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.3 bits(97) 0.0 20/21(95%) 0/21(0%) Minus/Plus
Query       46  *K*FNKRTYH*GREFHSLYGR  108
                *K*FNKRT H*GREFHSLYGR
Subject   6675  *K*FNKRTCH*GREFHSLYGR  6737

Range 6: 6326 to 6571 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
180.7 bits(388) 0.0 80/82(98%) 0/82(0%) Minus/Plus
Query      212  FMREFALLVKWVTWRTALITMQLRYPMPTGWASCQLK**MKRKLKHTTTVCGS*LEISTR*GAQFLGCLKL*IRP*VFGMV*  457
                F REFALLVKWVTWRTALITMQLRYPMPTGWAS QLK**MKRKLKHTTTVCGS*LEISTR*GAQFLGCLKL*IRP*VFGMV*
Subject   6326  FGREFALLVKWVTWRTALITMQLRYPMPTGWASWQLK**MKRKLKHTTTVCGS*LEISTR*GAQFLGCLKL*IRP*VFGMV*  6571

Range 7: 6611 to 6730 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.0 bits(142) 0.0 39/40(98%) 0/40(0%) Minus/Plus
Query       53  SLWVFIACSDFQLLFIAFLXXXXXXX*ENLSLRTRVS*PL  172
                SLWVFIACSDFQLLFIAFLVVVKVV**ENLSLRTR+S*PL
Subject   6611  SLWVFIACSDFQLLFIAFLVVVKVV**ENLSLRTRIS*PL  6730

Range 8: 6330 to 6602 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
193.5 bits(416) 0.0 90/91(99%) 0/91(0%) Plus/Minus
Query      181  DKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISRAMQILS  453
                DKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISI NSPSL*A*DTSIA*LSMQFSRLPISRAMQILS
Subject   6330  DKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIANSPSL*A*DTSIA*LSMQFSRLPISRAMQILS  6602

Grapevine Rupestris stem pitting associated virus, complete genome

Sequence ID: AF026278.1 Length: 8725 Number of Matches: 7

Range 1: 6325 to 6735 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
301.7 bits(652) 0.0 126/137(92%) 0/137(0%) Minus/Plus
Query       48  IYERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTA  458
                I+ERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMM EEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALS+WH + IMNNLVKALSTFEFVGV+SVL+FPVV+HSVPGSGKSSLIRELI+EDE+FIAFTA
Subject   6325  IWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHYLSIMNNLVKALSTFEFVGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFIAFTA  6735

Range 2: 6331 to 6729 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
156.4 bits(335) 0.0 71/133(53%) 0/133(0%) Plus/Minus
Query       54  KGYETLVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQPRN*APHLVLISN*EPHTVVVCFNFLFIHHFN*QLAQPVGIGYLNCIVINAVLQVTHFTSNANSL  452
                + YE L+L +   Y*TTFTTTR+ MN+ WK +H  NT+KLK  Q FN*+IHN   MPNT*GLI  FK   N*A HL+L+ + E +T+++  +F   HHFN  L+QPV IG L  I++N +LQVTH  SNA  L
Subject   6331  ESYEILILGN*LPY*TTFTTTRHTMNDYWKFKHTENTYKLKC*QCFN*IIHNTQIMPNT*GLINRFK*A*N*ASHLMLVPDQESNTIIMGLHFFLGHHFNG*LSQPVRIGDLYRIIVNTILQVTHLPSNAYPL  6729

Range 3: 6330 to 6602 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
147.2 bits(315) 0.0 72/91(79%) 0/91(0%) Plus/Minus
Query      181  DKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISRAMQILS  453
                D ALTKLFII+  CQ LKA*SIASN PEIEHLILCLFLT+N TQL* ASTSSS IIS+D+SPS  A*+TSIA*LS+QFSRLPIS AM I S
Subject   6330  DNALTKLFIILK*CQILKA*SIASNRPEIEHLILCLFLTKNLTQL*WASTSSSVIISMDSSPSRYA*ETSIA*LSIQFSRLPISLAMHIRS  6602

Range 4: 6341 to 6730 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
120.7 bits(257) 0.0 70/130(54%) 0/130(0%) Plus/Minus
Query       53  *RL*NSRPQ**VLLLNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*LGTAHSCSVLQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFHEQC  442
                *+L*NS P+    LLNYFYHYQ  YE  LEI*A  KH QTQ  T L*L+YS* S++AK+LRPN  LQ   KLS SS A  *    H+ +   L   SSFQ    PA  HR P  H+ Q +SPGYP   QC
Subject   6341  *KL*NSHPRKLAPLLNYFYHYQAHYE*LLEI*AH*KHLQTQMLTML*LNYS*YSNNAKYLRPNQSLQIGLKLSISSYACS*PRI*HNYNGPPLLPRSSFQWIALPAGTHRRPLSHNCQYNSPGYPSP*QC  6730

Range 5: 6336 to 6623 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
95.0 bits(201) 0.0 50/96(52%) 0/96(0%) Minus/Plus
Query      160  NLHCS*NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*STLQLCAVPS*K*AQDEVLNFWVV*SYRLGLKCLAWCDYYE*LS*SFVYV*VCGC  447
                ++HC  +G*PGEL+* LC+ G+LC+ AGR ++*ND+   S   L LC +   + A DE+LNF  +*S  LGLK LA  +YYE* S*S V +*VC C
Subject   6336  DMHC*GDG*PGELY*QLCDRGLLCVPAGRAIH*NDDRGRSGGPL*LC*ILGQEQA*DEMLNFRPI*SD*LGLKYLALFEYYE*FS*SIVNI*VCRC  6623

Range 6: 6675 to 6767 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.9 bits(48) 0.0 13/31(42%) 0/31(0%) Minus/Plus
Query       16  *K*FNKRTYH*GREFHSLYGRAFPKHTQHNR  108
                *K*FNK     G EFHS + R   +   H +
Subject   6675  *K*FNKGANFRG*EFHSFHSRCSRQP*SHRK  6767

Range 7: 6338 to 6571 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.3 bits(158) 0.0 40/78(51%) 0/78(0%) Minus/Plus
Query      212  FALLVKWVTWRTALITMQLRYPMPTGWASCQLK**MKRKLKHTTTVCGS*LEISTR*GAQFLGCLKL*IRP*VFGMV*  445
                +ALL +WVTWR  L  M+ R PM TGW S  LK** ++K +    V  S    S R* AQF   LK  IRP*VFG++*
Subject   6338  YALLGRWVTWRIVLTIMR*RSPMRTGWESYPLK**PRKKWRPIIIVLDSWSGTSIR*DAQFQAYLKRLIRP*VFGII*  6571

Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome

Sequence ID: JX559646.1 Length: 8726 Number of Matches: 6

Range 1: 6325 to 6735 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
301.7 bits(652) 0.0 124/137(91%) 0/137(0%) Minus/Plus
Query       48  IYERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTA  458
                I+ERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMM EEEVEAHYNCVRFLVRNKHKMRCSISGLFEA+D*ALS+WH + IMNNLVKALSTFEF+GV+SVL+FPVV+HSVPGSGKSSLIRELI+EDESF+AFTA
Subject   6325  IWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAVD*ALSIWHCLSIMNNLVKALSTFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTA  6735

Range 2: 6325 to 6729 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
161.4 bits(346) 0.0 74/135(55%) 0/135(0%) Plus/Minus
Query       54  KGYETLVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQPRN*APHLVLISN*EPHTVVVCFNFLFIHHFN*QLAQPVGIGYLNCIVINAVLQVTHFTSNANSLIN  458
                + +ETLVL D   Y*TT TT R  M N+WK +H  NT+K +  Q FN +IHN  TMPNT*GLI  FK   N*APHL+L+ N*EPHT+VVC + L  HHF+  L Q + IG+L  I+INAVL + H +  A SL N
Subject   6325  ESHETLVL*D*LPY*TTLTTARYTMYNDWKFKHTENTYKFEG*QCFNQIIHNTQTMPNT*GLINRFK*A*N*APHLMLVPN*EPHTIVVCLHLLLCHHFDG*LTQSICIGHLYRIIINAVL*IAHLSGYAYSLPN  6729

Range 3: 6330 to 6602 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
157.8 bits(338) 0.0 75/91(82%) 0/91(0%) Plus/Minus
Query      181  DKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISRAMQILS  453
                D ALTKLFII+  CQ LKA*S ASN PEIEHLILCLFLTRN TQL*CASTSSS IIS+D+SP+L A*DTSIA*LSMQFSRLPIS AM I S
Subject   6330  DNALTKLFIILKQCQILKA*STASNRPEIEHLILCLFLTRNLTQL*CASTSSSVIISMDSSPNLYA*DTSIA*LSMQFSRLPISLAMHIRS  6602

Range 4: 6326 to 6718 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
117.0 bits(249) 0.0 67/131(51%) 0/131(0%) Plus/Minus
Query       65  NSRPQ**VLLLNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*LGTAHSCSVLQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFHEQCKFSHK  457
                NSRP     LLNY YH Q  Y  +LEI*A  KH   +  T L* +YS* S++AK+LRPN  LQ   KLSTSS A  *LGT+H+CSV   P  SSF+    P   HR P  H+YQCSS   P    C F+ K
Subject   6326  NSRPLRLTPLLNYSYHCQVHYV*RLEI*AH*KHL*IRRLTML*PNYS*YSNNAKYLRPNQPLQIGLKLSTSSYACS*LGTSHNCSVPPPPPLSSFRWIAHPIYMHRTPLSHNYQCSSLDCPSLWLCIFAPK  6718

Range 5: 6336 to 6623 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.9 bits(192) 0.0 49/96(51%) 0/96(0%) Minus/Plus
Query      160  NLHCS*NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*STLQLCAVPS*K*AQDEVLNFWVV*SYRLGLKCLAWCDYYE*LS*SFVYV*VCGC  447
                N+H   +G   ELH**LC+ G+LC+  G  ++ ND+  G   TLQLC VPS*+ A DEVLNF  +*S  LGLK LA  +YYE*  *S V + +  C
Subject   6336  NMHSQRDGQSRELH**LCDRGVLCI*IG*AIHRNDDRGGGGGTLQLCEVPS*EQA*DEVLNFRPI*SG*LGLKYLALFEYYE*FG*SIVNLRIYRC  6623

Range 6: 6326 to 6571 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.8 bits(170) 0.0 45/82(55%) 0/82(0%) Minus/Plus
Query      212  FMREFALLVKWVTWRTALITMQLRYPMPTGWASCQLK**MKRKLKHTTTVCGS*LEISTR*GAQFLGCLKL*IRP*VFGMV*  457
                F  E+A   +W   RTALI M+ R PM   W S   K** +R+ +HTT V GS*L  S R*GAQF   LK  IRP*VFG+V*
Subject   6326  FGSEYA*PERWAI*RTALIIMR*RCPMHIDWVSYPSK**QRRRWRHTTIV*GS*LGTSIR*GAQFQAYLKRLIRP*VFGIV*  6571

Nucleotide Sequence (464 letters)

Query ID:ds2016-57_12
Query definition:No definition line
Query length:638
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 8 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
47
94
141
188
235
282
329
376
423
464

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate CS BR, complete genome

Sequence ID: KX958435.1 Length: 8743 Number of Matches: 6

Range 1: 2309 to 2722 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
298.0 bits(644) 0.0 121/138(88%) 0/138(0%) Plus/Plus
Query       51  LGVFGH*GGSHKSLGWPKFMDEILSSAGGRSYYNSCLVQRYEENSKLALHKDDESCYETGHKVLTINLVGSATFTISKARNLVEGNYCSQVIRPGEFFEMPGGMQNNYFHGVSNCGNGRVSMTFRRQKLEDEDQVFRS  464
                +  + + GGSH+SLGWPKFMDEILSS GGRSYYNSCLVQRYEENSKLALHKDDE+CYE GHKVLTINLVGSATFTISKARNLVEGN CS VIRPGEFFEMP GMQNNYFHGVSNC +GRVSMTFRRQKLEDEDQVF S
Subject   2309  ISCYSYNGGSHRSLGWPKFMDEILSSTGGRSYYNSCLVQRYEENSKLALHKDDENCYEIGHKVLTINLVGSATFTISKARNLVEGNNCSLVIRPGEFFEMPRGMQNNYFHGVSNCEDGRVSMTFRRQKLEDEDQVFIS  2722

Range 2: 2329 to 2721 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
262.7 bits(567) 0.0 118/131(90%) 0/131(0%) Minus/Minus
Query       71  LRKT*SSSSNFWRLKVMETLPFPQLETPWK*LFCIPPGISKNSPGLIT*LQ*LPSTKFRALLIVKVAEPTKLMVKTLCPVS*QLSSSLCRANLEFSS*R*TKQEL**LRPPAELRISSMNFGHPKLL*LPP  463
                L KT*SSSSNFWRLKVMETLP  QLETPWK*LFCIP GISKNSPGLIT LQ  PSTKFRALL+VKVAEPTKL+VKTLCP+S*Q SSSLCRANLEFSS*R*TKQEL**LRPP ELRISS+NFGHPKLL*LPP
Subject   2329  LMKT*SSSSNFWRLKVMETLPSSQLETPWK*LFCIPLGISKNSPGLITRLQLFPSTKFRALLMVKVAEPTKLIVKTLCPIS*QFSSSLCRANLEFSS*R*TKQEL**LRPPVELRISSINFGHPKLL*LPP  2721

Range 3: 2331 to 2714 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
255.8 bits(552) 0.0 104/128(81%) 0/128(0%) Minus/Minus
Query       73  RPDPHLPTFGV*KSWKPSRFHNWRLHGSNYSAYPRASQRIHQA*SPDCNNCPLPNFGPCLL*KWLSRLN*WLRLCVRSHSSSHHPCAGLIWSSPHNAEPNRNCNSCAPQQN*GFHP*TLAIPSSCDCP  456
                R DPH PT GV*KSWK SR HNWRLHGSNYSAY  ASQRIHQA* PDCN  P PNF PCL *KWLS+ +* L+LC RSHSSSHHPCAGLIWSSPH+AEPNRNCNSCAP+ N*G HP*TLAIPSSCD P
Subject   2331  RLDPHPPTSGV*KSWKLSRLHNWRLHGSNYSAYLWASQRIHQA*LPDCNYFPQPNFEPCLW*KWLSQPS**LKLCARSHSSSHHPCAGLIWSSPHSAEPNRNCNSCAPRWN*GSHP*TLAIPSSCDYP  2714

Range 4: 2330 to 2722 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
227.0 bits(489) 0.0 103/131(79%) 0/131(0%) Minus/Minus
Query       72  ATKDLILIFQLLASESHGNPPVSTIGDSMEVIILHTPGHLKEFTRPNHLTAIIALYQISGLAYCESG*AD*IDG*DFVSGLIAALIILVQG*FGVLLITLNQTGIVIAAPPSRTKDFIHELWPSQALVTAP  464
                A +DLILI QLLASESHGN PV TIGDSMEVIILHT GHLKEFTRPN+ TAII+L QIS LAY +SG*A+ +D *+FV  LIA LIILVQG*FGVLLI LNQTGIVIAAPP  TKD IH+LWPSQA VT P
Subject   2330  ANEDLILILQLLASESHGNSPVFTIGDSMEVIILHTSGHLKEFTRPNYQTAIISLNQISSLAYGKSG*ANQVDS*NFVPDLIAVLIILVQG*FGVLLIALNQTGIVIAAPPGGTKDLIHKLWPSQAPVTTP  2722

Range 5: 2331 to 2714 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
222.8 bits(480) 0.0 101/128(79%) 0/128(0%) Plus/Plus
Query       73  GAVTRAWDGQSSWMKSLVLLGGAAITIPVWFSVMRRTPN*PCTRMMRAAMRPDTKS*PSI*SAQPLSQ*ARPEIW*RAIIAVR*LGLVNSLRCPGVCRIITSMESPIVETGGFP*LSDAKSWKMRIRS  456
                G VT AWDGQS WM+SLV  GGAAITIPVWFS MRRTPN*PCTRMMR AMR  TK * S   AQPL  *AR EIW R IIAV *LGLVNSLRCP VCRIITSMESPIV+TG FP*LSDA+SW+MRI+S
Subject   2331  GVVTGAWDGQSLWMRSLVPPGGAAITIPVWFSAMRRTPN*PCTRMMRTAMRSGTKF*LSTWLAQPLLP*ARLEIWLREIIAVW*LGLVNSLRCPEVCRIITSMESPIVKTGEFP*LSDARSWRMRIKS  2714

Range 6: 2332 to 2715 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
216.9 bits(467) 0.0 102/128(80%) 0/128(0%) Plus/Plus
Query       74  GQSQELGMAKVHG*NP*FCWGAQLLQFLFGSAL*GELQISPAQG**ELL*DRTQSLNHQFSRLSHFHNKQGPKFGRGQLLQSGD*AW*IL*DARGYAE*LLPWSLQLWKREGFHDFQTPKVGR*GSGL  457
                G SQELGMAKV+G*+P*F  GAQLLQFLFGSAL*GELQISPAQG**ELL*DR QS N+Q   LSHF++KQG KFG G+ LQSG+*AW*IL*DA+ YAE*LLPWSLQL +RE FHDFQTP+VG *GS L
Subject   2332  G*SQELGMAKVYG*DP*FHRGAQLLQFLFGSAL*GELQISPAQG**ELL*DRAQSFNYQLGWLSHFYHKQGSKFG*GK*LQSGN*AW*IL*DAQRYAE*LLPWSLQL*RRESFHDFQTPEVGG*GSSL  2715

Grapevine rupestris stem pitting associated virus isolate VF1, partial genome

Sequence ID: KT948710.1 Length: 8716 Number of Matches: 6

Range 1: 2318 to 2722 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
299.4 bits(647) 0.0 121/135(90%) 0/135(0%) Plus/Plus
Query       60  FGH*GGSHKSLGWPKFMDEILSSAGGRSYYNSCLVQRYEENSKLALHKDDESCYETGHKVLTINLVGSATFTISKARNLVEGNYCSQVIRPGEFFEMPGGMQNNYFHGVSNCGNGRVSMTFRRQKLEDEDQVFRS  464
                + + GGSHKSLGWPKFMDEILSS GGRSYYNSCLVQRYE+NSKLALHKDDE CYE GHKVLTINLVGSATFTISKARNLVEGNYC+ VIRPGEFFEMP GMQNNYFHGVSNC +GRVSMTFRRQKLEDEDQVF S
Subject   2318  YNYNGGSHKSLGWPKFMDEILSSTGGRSYYNSCLVQRYEKNSKLALHKDDEDCYEIGHKVLTINLVGSATFTISKARNLVEGNYCNLVIRPGEFFEMPRGMQNNYFHGVSNCEDGRVSMTFRRQKLEDEDQVFIS  2722

Range 2: 2329 to 2721 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
260.0 bits(561) 0.0 117/131(89%) 0/131(0%) Minus/Minus
Query       71  LRKT*SSSSNFWRLKVMETLPFPQLETPWK*LFCIPPGISKNSPGLIT*LQ*LPSTKFRALLIVKVAEPTKLMVKTLCPVS*QLSSSLCRANLEFSS*R*TKQEL**LRPPAELRISSMNFGHPKLL*LPP  463
                L KT*SSSSNFWRLKVMETLP  QLETPWK*LFCIP GISKNSPGLIT LQ* PSTKFRALL+VKVAEPTKL+VKTLCP+S*Q SSSLCRANLEF S*R*T+QEL**LRPP ELRISS+NFGHPKLL*LPP
Subject   2329  LMKT*SSSSNFWRLKVMETLPSSQLETPWK*LFCIPLGISKNSPGLITRLQ*FPSTKFRALLMVKVAEPTKLIVKTLCPIS*QSSSSLCRANLEFFS*R*TRQEL**LRPPVELRISSINFGHPKLL*LPP  2721

Range 3: 2331 to 2708 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
244.8 bits(528) 0.0 99/126(79%) 0/126(0%) Minus/Minus
Query       73  DPHLPTFGV*KSWKPSRFHNWRLHGSNYSAYPRASQRIHQA*SPDCNNCPLPNFGPCLL*KWLSRLN*WLRLCVRSHSSSHHPCAGLIWSSPHNAEPNRNCNSCAPQQN*GFHP*TLAIPSSCDCP  450
                DPH PT GV*KSWK  R HNWRLHGSNY AY  ASQRIHQ *SPDCNN P PNF PCL *KW S+ N* L+LCV+SHSS HHPCAGLIWSS H+AEP+RNCNSCAP+ N*G HP*TLAIPSSCD P
Subject   2331  DPHPPTSGV*KSWKLYRLHNWRLHGSNYFAYLWASQRIHQV*SPDCNNFPQPNFEPCLW*KWPSQPN**LKLCVQSHSSPHHPCAGLIWSSSHSAEPDRNCNSCAPRWN*GSHP*TLAIPSSCDYP  2708

Range 4: 2330 to 2722 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
221.5 bits(477) 0.0 102/131(78%) 0/131(0%) Minus/Minus
Query       72  ATKDLILIFQLLASESHGNPPVSTIGDSMEVIILHTPGHLKEFTRPNHLTAIIALYQISGLAYCESG*AD*IDG*DFVSGLIAALIILVQG*FGVLLITLNQTGIVIAAPPSRTKDFIHELWPSQALVTAP  464
                A ++LILI QLLAS+SHGN  V TIGDSMEVIILHT GHLKEFTR NH  AII+L QIS LAY ESG A+ ID *+FVS LIA LIILVQG*FGVLLI LNQTGIVIAAPP  TKD IH+LWPSQALVT P
Subject   2330  ANENLILILQLLASKSHGNSTVFTIGDSMEVIILHTSGHLKEFTRSNHQIAIISLNQISSLAYGESGRANQIDS*NFVSNLIAVLIILVQG*FGVLLIALNQTGIVIAAPPGGTKDLIHKLWPSQALVTTP  2722

Range 5: 2331 to 2711 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
217.8 bits(469) 0.0 98/127(77%) 0/127(0%) Plus/Plus
Query       73  GAVTRAWDGQSSWMKSLVLLGGAAITIPVWFSVMRRTPN*PCTRMMRAAMRPDTKS*PSI*SAQPLSQ*ARPEIW*RAIIAVR*LGLVNSLRCPGVCRIITSMESPIVETGGFP*LSDAKSWKMRIR  453
                G VTRAWDGQS WM+SLV  GGAAITIPVWFS MRRTPN*PCTRMMR AMR DTK * SI  A+PLS *AR EIW R IIA+ *L LVNSLRCP VC+IITSMESPIV+T  FP*L DA+SW+MRI+
Subject   2331  GVVTRAWDGQSLWMRSLVPPGGAAITIPVWFSAMRRTPN*PCTRMMRTAMRLDTKF*LSIWLARPLSP*ARLEIWLREIIAIW*LDLVNSLRCPEVCKIITSMESPIVKTVEFP*LLDARSWRMRIK  2711

Range 6: 2332 to 2709 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
200.8 bits(432) 0.0 97/126(77%) 0/126(0%) Plus/Plus
Query       74  GQSQELGMAKVHG*NP*FCWGAQLLQFLFGSAL*GELQISPAQG**ELL*DRTQSLNHQFSRLSHFHNKQGPKFGRGQLLQSGD*AW*IL*DARGYAE*LLPWSLQLWKREGFHDFQTPKVGR*GS  451
                G SQELGMAKV+G*+P*F  GAQLLQFL GSAL* ELQISPAQG** LL*D TQS N+QF  L HFH+KQG KFG G+LLQSGD* W*IL*DA+ YA+*LLPWSLQL +R  FHDF TP+VG *GS
Subject   2332  G*SQELGMAKVYG*DP*FHRGAQLLQFLSGSAL*EELQISPAQG**GLL*DWTQSFNYQFGWLGHFHHKQGSKFG*GKLLQSGD*TW*IL*DAQRYAK*LLPWSLQL*RR*SFHDF*TPEVGG*GS  2709

Grapevine rupestris stem pitting associated virus isolate SK704 A, complete genome

Sequence ID: KX274274.1 Length: 8725 Number of Matches: 6

Range 1: 2317 to 2721 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
295.2 bits(638) 0.0 120/135(89%) 0/135(0%) Plus/Plus
Query       60  FGH*GGSHKSLGWPKFMDEILSSAGGRSYYNSCLVQRYEENSKLALHKDDESCYETGHKVLTINLVGSATFTISKARNLVEGNYCSQVIRPGEFFEMPGGMQNNYFHGVSNCGNGRVSMTFRRQKLEDEDQVFRS  464
                + + GGSHKSLGWPKFMDEILS  GGRSYYNSCLVQRYEENSKLALHKDDE CYE GHKVLT+NLVGSATFTISKARNLVEGN CS VIRPGEFFEMP GMQNNYFHGVSNC NGRVSMTFRRQKLEDE+QVF S
Subject   2317  YNYNGGSHKSLGWPKFMDEILSFTGGRSYYNSCLVQRYEENSKLALHKDDEDCYEIGHKVLTVNLVGSATFTISKARNLVEGNNCSLVIRPGEFFEMPRGMQNNYFHGVSNCENGRVSMTFRRQKLEDENQVFIS  2721

Range 2: 2328 to 2720 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
255.4 bits(551) 0.0 115/131(88%) 0/131(0%) Minus/Minus
Query       71  LRKT*SSSSNFWRLKVMETLPFPQLETPWK*LFCIPPGISKNSPGLIT*LQ*LPSTKFRALLIVKVAEPTKLMVKTLCPVS*QLSSSLCRANLEFSS*R*TKQEL**LRPPAELRISSMNFGHPKLL*LPP  463
                L KT* SSSNFWRLKVMETLPF QLETPWK*LFCIP GISKNSPGLIT LQ  PSTKFRALL+VKVAEPTKL VKTLCP+S*Q SSSLCRA+LEFSS*R*T+QEL**LRPP +LRISS+NFGHPKLL*LPP
Subject   2328  LIKT*FSSSNFWRLKVMETLPFSQLETPWK*LFCIPLGISKNSPGLITRLQLFPSTKFRALLMVKVAEPTKLTVKTLCPIS*QSSSSLCRASLEFSS*R*TRQEL**LRPPVKLRISSINFGHPKLL*LPP  2720

Range 3: 2330 to 2713 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
239.3 bits(516) 0.0 96/128(75%) 0/128(0%) Minus/Minus
Query       73  RPDPHLPTFGV*KSWKPSRFHNWRLHGSNYSAYPRASQRIHQA*SPDCNNCPLPNFGPCLL*KWLSRLN*WLRLCVRSHSSSHHPCAGLIWSSPHNAEPNRNCNSCAPQQN*GFHP*TLAIPSSCDCP  456
                R D HLPT GV*KSWK S FHNW+ HGSNY AY  ASQ+IHQA*  DCN  P PN GPCL *KWL++ N* L+LC +SHSS HHPCAGL+WSSPH+AEP+RNCNSCAPQ N*G HP*TLAIPSSCD P
Subject   2330  RLDSHLPTSGV*KSWKLSHFHNWKPHGSNYFAYLWASQKIHQA*LQDCNYFPQPNSGPCLW*KWLNQPN*QLKLCAQSHSSPHHPCAGLVWSSPHSAEPDRNCNSCAPQ*N*GSHP*TLAIPSSCDYP  2713

Range 4: 2329 to 2715 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
230.2 bits(496) 0.0 103/129(80%) 0/129(0%) Minus/Minus
Query       72  KDLILIFQLLASESHGNPPVSTIGDSMEVIILHTPGHLKEFTRPNHLTAIIALYQISGLAYCESG*AD*IDG*DFVSGLIAALIILVQG*FGVLLITLNQTGIVIAAPPSRTKDFIHELWPSQALVTAP  458
                KDLILIFQLLASESHGN P+ TIG+ MEVIILHT GHLK+FTRPN+ TAII+L QI GLAY ESG* + ID *+FV  LIA LIILVQG*FGVLLI LNQTGIVIAAPPS TKD IH+LWPSQALVT P
Subject   2329  KDLILIFQLLASESHGNSPIFTIGNPMEVIILHTSGHLKKFTRPNYKTAIISLNQIPGLAYGESG*TNQIDS*NFVPNLIAVLIILVQG*FGVLLIALNQTGIVIAAPPSETKDLIHKLWPSQALVTTP  2715

Range 5: 2330 to 2713 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
222.4 bits(479) 0.0 100/128(78%) 0/128(0%) Plus/Plus
Query       73  GAVTRAWDGQSSWMKSLVLLGGAAITIPVWFSVMRRTPN*PCTRMMRAAMRPDTKS*PSI*SAQPLSQ*ARPEIW*RAIIAVR*LGLVNSLRCPGVCRIITSMESPIVETGGFP*LSDAKSWKMRIRS  456
                G VTRAWDGQS WM+SLV LGGAAITIPVWFS MRRTPN*PCTRMMR AMR  TK * SI   QPLS *ARP IW R IIAV *LGLVN LRCP VC+IITSM  PIV+ G FP*LSDA+SWKMRI+S
Subject   2330  GVVTRAWDGQSLWMRSLVSLGGAAITIPVWFSAMRRTPN*PCTRMMRTAMRLGTKF*LSIWLVQPLSP*ARPGIWLREIIAVL*LGLVNFLRCPEVCKIITSMGFPIVKMGEFP*LSDARSWKMRIKS  2713

Range 6: 2331 to 2714 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
199.5 bits(429) 0.0 95/128(74%) 0/128(0%) Plus/Plus
Query       74  GQSQELGMAKVHG*NP*FCWGAQLLQFLFGSAL*GELQISPAQG**ELL*DRTQSLNHQFSRLSHFHNKQGPKFGRGQLLQSGD*AW*IL*DARGYAE*LLPWSLQLWKREGFHDFQTPKVGR*GSGL  457
                G SQELGMAKV+G*+P*F WGAQLLQFL GSAL*GELQ SPAQG** LL*D  QS N QF   SHFH+KQGP+FG G+ LQS +*AW*I *DA+ YA+*LLPW  QL K E FHDFQTP+VGR* S L
Subject   2331  G*SQELGMAKVYG*DP*FHWGAQLLQFLSGSAL*GELQTSPAQG**GLL*DWAQSFNCQFGWFSHFHHKQGPEFG*GK*LQSCN*AW*IF*DAQRYAK*LLPWGFQL*KWESFHDFQTPEVGR*ESSL  2714

Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome

Sequence ID: KR054734.1 Length: 8753 Number of Matches: 6

Range 1: 2317 to 2721 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
279.2 bits(603) 0.0 111/135(82%) 0/135(0%) Plus/Plus
Query       60  FGH*GGSHKSLGWPKFMDEILSSAGGRSYYNSCLVQRYEENSKLALHKDDESCYETGHKVLTINLVGSATFTISKARNLVEGNYCSQVIRPGEFFEMPGGMQNNYFHGVSNCGNGRVSMTFRRQKLEDEDQVFRS  464
                + + GGSHKSLGWPKF+DE+LSS GGRSYYNSCLVQ YE+NSKLALHKDDE CYE GHKVLTINLVGSATFTIS+ARNLVEGN CS VI+PGEFFEMP GMQ +YFHGVSNC +GR+SMTFRRQ+LEDE+QVF S
Subject   2317  YSYNGGSHKSLGWPKFLDELLSSTGGRSYYNSCLVQLYEKNSKLALHKDDEDCYEIGHKVLTINLVGSATFTISRARNLVEGNNCSLVIKPGEFFEMPRGMQKDYFHGVSNCESGRISMTFRRQRLEDENQVFIS  2721

Range 2: 2328 to 2720 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
238.0 bits(513) 0.0 109/131(83%) 0/131(0%) Minus/Minus
Query       71  LRKT*SSSSNFWRLKVMETLPFPQLETPWK*LFCIPPGISKNSPGLIT*LQ*LPSTKFRALLIVKVAEPTKLMVKTLCPVS*QLSSSLCRANLEFSS*R*TKQEL**LRPPAELRISSMNFGHPKLL*LPP  463
                L KT* SSSN WRLKV+E LP  QLETPWK* FCIP GISKNSPGLIT LQ  PSTKFRALL+VKVAEPTKLMVKTLCP+S*Q SSSLCRANLEF S* *T+QEL**LRPP ELR SS NFGHPKLL LPP
Subject   2328  LIKT*FSSSNLWRLKVIEILPLSQLETPWK*SFCIPLGISKNSPGLITKLQLFPSTKFRALLMVKVAEPTKLMVKTLCPIS*QSSSSLCRANLEFFS*S*TRQEL**LRPPVELRSSSRNFGHPKLLWLPP  2720

Range 3: 2330 to 2707 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
204.1 bits(439) 0.0 87/126(69%) 0/126(0%) Minus/Minus
Query       73  DPHLPTFGV*KSWKPSRFHNWRLHGSNYSAYPRASQRIHQA*SPDCNNCPLPNFGPCLL*KWLSRLN*WLRLCVRSHSSSHHPCAGLIWSSPHNAEPNRNCNSCAPQQN*GFHP*TLAIPSSCDCP  450
                D HLP FG *KS K SRFHNWRLHG+N SAY  A +RI QA*SP+CN  P  NFG CL *K LS+ N*WL+L  + HSS HHPC GL WSS H AEP+RNCNSC PQ N*G HP TLAIPSSC  P
Subject   2330  DSHLPIFGA*KS*KFSRFHNWRLHGNNLSAYLWAFRRILQA*SPNCNCFPQLNFGLCLW*KLLSQPN*WLKLYAQFHSSPHHPCVGLTWSSSHKAEPDRNCNSCGPQWN*GAHPGTLAIPSSCGYP  2707

Range 4: 2329 to 2721 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
183.0 bits(393) 0.0 86/131(66%) 0/131(0%) Minus/Minus
Query       72  ATKDLILIFQLLASESHGNPPVSTIGDSMEVIILHTPGHLKEFTRPNHLTAIIALYQISGLAYCESG*AD*IDG*DFVSGLIAALIILVQG*FGVLLITLNQTGIVIAAPPSRTKDFIHELWPSQALVTAP  464
                A K+LILIFQ LA +SH N P  TIGDSME+I LHT GH +EF+R NH TAI++L  ISG AY +S *A+ I+G*+F+   IA LIILV G* GVLLI LNQTGIVIAA PS T++ I ELWPSQALV  P
Subject   2329  ANKNLILIFQSLAPKSHRNSPAFTIGDSMEIIFLHTSGHFEEFSRLNHQTAIVSLN*ISGSAYGKSC*ANQING*NFMPNFIAVLIILV*G*LGVLLIKLNQTGIVIAAAPSGTEELIQELWPSQALVATP  2721

Range 5: 2330 to 2710 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
175.2 bits(376) 0.0 85/127(67%) 0/127(0%) Plus/Plus
Query       73  GAVTRAWDGQSSWMKSLVLLGGAAITIPVWFSVMRRTPN*PCTRMMRAAMRPDTKS*PSI*SAQPLSQ*ARPEIW*RAIIAVR*LGLVNSLRCPGVCRIITSMESPIVETGGFP*LSDAKSWKMRIR  453
                G  TRAWDGQSSWM S V LG AAITIPVWFS MRRTP+*P TRMMR AM+   K *P I  AQ L  *A PEI  R  IAV *L L NS +CP VCR I SMESPIV+ G F *L  AK WKMRI+
Subject   2330  GVATRAWDGQSSWMSSSVPLGAAAITIPVWFSFMRRTPS*PYTRMMRTAMKLGIKF*PLIWLAQQLLP*AEPEI*LRETIAVW*LSLENSSKCPEVCRKIISMESPIVKAGEFL*LLGAKDWKMRIK  2710

Range 6: 2331 to 2708 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
167.4 bits(359) 0.0 83/126(66%) 0/126(0%) Plus/Plus
Query       74  GQSQELGMAKVHG*NP*FCWGAQLLQFLFGSAL*GELQISPAQG**ELL*DRTQSLNHQFSRLSHFHNKQGPKFGRGQLLQSGD*AW*IL*DARGYAE*LLPWSLQLWKREGFHDFQTPKVGR*GS  451
                G  QELGMAKV G* P F WG QLLQFL GSAL* ELQ+SP QG** LL*+   S NH F  LS+F++KQ PKF  G+ LQ GD*AW IL +A+ YAE L PWSLQL KRE F+DF  PK+GR* S
Subject   2331  G*PQELGMAKVPG*APQFHWGPQLLQFLSGSAL*EELQVSPTQG**GLL*NWA*SFNH*FGWLSNFYHKQSPKFS*GKQLQFGD*AWRILRNAQRYAERLFPWSLQL*KRENFYDF*APKIGR*ES  2708

Rupestris stem pitting associated virus isolate RSPaV PN, complete genome

Sequence ID: AY368172.2 Length: 8743 Number of Matches: 7

Range 1: 2317 to 2721 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
275.1 bits(594) 0.0 109/135(81%) 0/135(0%) Plus/Plus
Query       60  FGH*GGSHKSLGWPKFMDEILSSAGGRSYYNSCLVQRYEENSKLALHKDDESCYETGHKVLTINLVGSATFTISKARNLVEGNYCSQVIRPGEFFEMPGGMQNNYFHGVSNCGNGRVSMTFRRQKLEDEDQVFRS  464
                + + GG+HKSLGWPKF+DEILS  GGRSYYNSCLVQ YEENSKLALH+DDE CYE GHKVLT+NLVGSA FTISKARNLVEGN CS  +RPGEFFEMP GMQ+NYFHG+SNC  GRVSMTFRRQKLED+D VF S
Subject   2317  YSYNGGNHKSLGWPKFLDEILSHTGGRSYYNSCLVQIYEENSKLALHRDDEDCYEVGHKVLTVNLVGSAIFTISKARNLVEGNNCSLEVRPGEFFEMPRGMQSNYFHGISNCEGGRVSMTFRRQKLEDDDPVFIS  2721

Range 2: 2328 to 2720 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
220.1 bits(474) 0.0 103/131(79%) 0/131(0%) Minus/Minus
Query       71  LRKT*SSSSNFWRLKVMETLPFPQLETPWK*LFCIPPGISKNSPGLIT*LQ*LPSTKFRALLIVKVAEPTKLMVKTLCPVS*QLSSSLCRANLEFSS*R*TKQEL**LRPPAELRISSMNFGHPKLL*LPP  463
                L KT SSSSNFWRLKV++TLP  QLE P K*L CIP GISKNSPGL + LQ  PSTKF ALL+VK+AEPT+L VKTLCP S*Q SSSLC+ANLEFSS* *T+QEL**LRPP  LRISS NFGHPKLL*LPP
Subject   2328  LMKTGSSSSNFWRLKVIDTLPPSQLEIP*K*LLCIPLGISKNSPGLTSRLQLFPSTKFLALLMVKIAEPTRLTVKTLCPTS*QSSSSLCKANLEFSS*I*TRQEL**LRPPV*LRISSRNFGHPKLL*LPP  2720

Range 3: 2333 to 2713 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
131.2 bits(280) 0.0 67/127(53%) 0/127(0%) Minus/Minus
Query       76  RPDPHLPTFGV*KSWKPSRFHNWRLHGSNYSAYPRASQRIHQA*SPDCNNCPLPNFGPCLL*KWLSRLN*WLRLCVRSHSSSHHPCAGLIWSSPHNAEPNRNCNSCAPQQN*GFHP*TLAIPSSCDC  456
                R D H P FGV*KS    R HNW+ H SN SAYP ASQRIHQA*  DCN    P+F PCL *K LSR +*  +   + HSS HHP    I +  H  E  ++CNSC  Q +*G H    AIPS  DC
Subject   2333  RLDHHPPIFGV*KSSTLFRPHNWKSHESNCSAYP*ASQRIHQA*PQDCNYSLQPSF*PCLW*KLLSRPD*QSKPYAQPHSSPHHPYVRPI*NFLHRFEQGKSCNSCDRQCD*GSHLEISAIPSFYDC  2713

Range 4: 2332 to 2721 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.9 bits(275) 0.0 66/130(51%) 0/130(0%) Minus/Minus
Query       75  ATKDLILIFQLLASESHGNPPVSTIGDSMEVIILHTPGHLKEFTRPNHLTAIIALYQISGLAYCESG*AD*IDG*DFVSGLIAALIILVQG*FGVLLITLNQTGIVIAAPPSRTKDFIHELWPSQALVTA  464
                A +D I+I Q LAS+SH +    TIG+ M+VI LHTP HLKEFTRP+  TAII   Q+S LAY ++ *AD I+  + +  LIA LII + G F +  I LN+  +VIAA  S TKD I +  PSQA + A
Subject   2332  ADEDWIIILQFLASKSHRHSSALTIGNPMKVIALHTPRHLKEFTRPDLKTAIIPFNQVSSLAYGKNC*ADQINSQNLMPNLIAVLIIPM*GQFRIFFIDLNKARVVIAATASVTKDLI*KFRPSQAFMIA  2721

Range 5: 2333 to 2713 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.8 bits(253) 0.0 65/127(51%) 0/127(0%) Plus/Plus
Query       76  AVTRAWDGQSSWMKSLVLLGGAAITIPVWFSVMRRTPN*PCTRMMRAAMRPDTKS*PSI*SAQPLSQ*ARPEIW*RAIIAVR*LGLVNSLRCPGVCRIITSMESPIVETGGFP*LSDAKSWKMRIRS  456
                A+ +AWDG++  M+SLV L  AAIT    F  M++  N P   MMR AMR   + *  I SAQ    *AR E W + IIAV   GLVNSLRC GVCR IT M  PIV      *L DAK+W+M I+S
Subject   2333  AIIKAWDGRNF*MRSLVTLAVAAITTLALFKSMKKILNWPYIGMMRTAMRLGIRF*LLIWSAQQFLP*ARLETWLKGIIAVLRSGLVNSLRCLGVCRAITFMGFPIVRAEECR*LLDAKNWRMMIQS  2713

Range 6: 2514 to 2714 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.0 bits(153) 0.0 39/67(58%) 0/67(0%) Plus/Plus
Query      257  RLSHFHNKQGPKFGRGQLLQSGD*AW*IL*DARGYAE*LLPWSLQLWKREGFHDFQTPKVGR*GSGL  457
                RLS+F++KQG K G  + LQS   AW*IL*DA GYAE LL W  QL  R+   DF TPK+G * S L
Subject   2514  RLSNFYHKQG*KLG*RE*LQS*GQAW*IL*DA*GYAEQLLSWDFQL*GRKSVDDF*TPKIGG**SSL  2714

Range 7: 2334 to 2480 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.0 bits(70) 0.0 25/49(51%) 0/49(0%) Plus/Plus
Query       77  QSQELGMAKVHG*NP*FCWGAQLLQFLFGSAL*GELQISPAQG**ELL*  223
                QS +LGMA++  *+P*  W +QLLQ L  S L* +  I    G** LL*
Subject   2334  QS*KLGMAEISR*DP*SHWRSQLLQLLPCSNL*RKF*IGLT*G**GLL*  2480