Nucleotide Sequence (512 letters)
Query ID: | ds2016-58_76 |
Query definition: | No definition line |
Query length: | 489 |
Program: | TBLASTX 2.2.29+ |
Database: | /save/stheil/db/refseq_vir/viral.genomic.fna |
Graphic Summary
Descriptions
Alignments
Penicillium janczewskii chrysovirus 1 RNA 1, complete sequence
Range 1: 1537 to 1974 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
138.6 bits(297) | 0.0 | 59/146(40%) | 0/146(0%) | Minus/Plus |
Query 3 FFQDGRWSQEEFDKRFKEAVAVQCDSMARSIGKELASLGDHMESFEEFLRQRRLWVKPGPVTGAPKTDVYLKVPESRMKELADVAEEVADMTIVVLKRVRLNKSALFEIPQFVELEQEALADYEPNAYSRNFCKMKPGKEGGRALY 440 +F DGR S EF +R + A++ + +L ++ + M + E FLR R+ WVKPG TGAPKTD+YL + ++ E+ D T +V++++RLNK+A FE P+F +L QEAL +EP +++R F K + GK GRAL+ Subject 1537 YFPDGRKSSSEFSRRLRGAISRSYQHLGVVAKDKLLTMEEDMRTLESFLRIRKSWVKPGSATGAPKTDLYLTATVEKEALAKELGAELLDATHLVIRKMRLNKAATFEFPEFPQLVQEALDKFEPTSFTRYFTKYEVGKLEGRALF 1974
Magnaporthe oryzae chrysovirus 1 segment 1, complete genome
Range 1: 1499 to 1930 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
136.3 bits(292) | 0.0 | 60/144(42%) | 0/144(0%) | Minus/Plus |
Query 3 QDGRWSQEEFDKRFKEAVAVQCDSMARSIGKELASLGDHMESFEEFLRQRRLWVKPGPVTGAPKTDVYLKVPESRMKELADVAEEVADMTIVVLKRVRLNKSALFEIPQFVELEQEALADYEPNAYSRNFCKMKPGKEGGRALY 434 +DG S + F F V G+ + S+ D + SF+ FL R+ WV+PG VTG+PKTD+YL+ R +A+VA+++A M VL VRLNK+A FE P+F + + LADY PN+++R F K + GK GR LY Subject 1499 RDGTQSADRFAHEFACEVRALLHQTIADGGERMRSVTDMVASFDTFLEYRKKWVRPGSVTGSPKTDIYLQAVSERESMIAEVADDLAAMGTYVLANVRLNKAATFEFPEFPAIVKRVLADYVPNSFTRYFIKNEIGKPAGRPLY 1930
Range 2: 1501 to 1704 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
42.8 bits(87) | 0.0 | 24/68(35%) | 0/68(0%) | Plus/Minus |
Query 229 R*TSVFGAPVTGPGFTQRRLWRRNSSKDSMWSPRLASSFPIERAIESHCTATASLNRLSNSSCDHLPS 432 R* SV G PVT PG T + RN SK++ S P + T+ N +N S D +PS Subject 1501 R*MSVLGLPVTEPGLTHFLRYSRNVSKEATMSVTERMRSPPSAIVWCSSARTSHANSCANRSADCVPS 1704
Magnaporthe oryzae chrysovirus 3 RdRp gene for RNA dependent RNA polymerase, complete cds
Range 1: 1501 to 1932 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.2 bits(283) | 0.0 | 58/144(40%) | 0/144(0%) | Minus/Plus |
Query 3 QDGRWSQEEFDKRFKEAVAVQCDSMARSIGKELASLGDHMESFEEFLRQRRLWVKPGPVTGAPKTDVYLKVPESRMKELADVAEEVADMTIVVLKRVRLNKSALFEIPQFVELEQEALADYEPNAYSRNFCKMKPGKEGGRALY 434 +DG S + F F V G+++ ++ D + SF+ FL R+ WV+PG VTG+PK D+YL+ R +A+VA+++A M VL VRLNK+A FE +F + + LADY PN+++R F K + GK GRALY Subject 1501 RDGTQSADRFAHEFACEVRALLHQTIADGGEQMRTVTDMVASFDTFLEYRKKWVRPGSVTGSPKADIYLEAVSEREGMIAEVADDIAAMGTYVLANVRLNKAATFEFAEFPAIVKRVLADYVPNSFTRYFIKNEIGKPAGRALY 1932
Range 2: 1503 to 1697 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
39.6 bits(80) | 0.0 | 21/65(32%) | 0/65(0%) | Plus/Minus |
Query 238 SVFGAPVTGPGFTQRRLWRRNSSKDSMWSPRLASSFPIERAIESHCTATASLNRLSNSSCDHLPS 432 S G PVT PG T + RN S D+ S + P + T+ N +N S D +PS Subject 1503 SALGLPVTDPGLTHFLRYSRNVSNDATMSVTVRICSPPSAIVWCSKALTSQANSCANRSADCVPS 1697
Fusarium oxysporum f. sp. dianthi mycovirus 1 segment 1, complete sequence
Range 1: 1442 to 1789 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
86.5 bits(183) | 0.0 | 40/116(34%) | 0/116(0%) | Minus/Plus |
Query 144 DIEAEIEERTNPQKPKVFFQDGRWSQEEFDKRFKEAVAVQCDSMARSIGKELASLGDHMESFEEFLRQRRLWVKPGPVTGAPKTDVYLKVPESRMKELADVAEEVADMTIVVLKRV 491 + EAE + K + RWS E FD + EA+ + +++A + + F+EFL+ R+ WVK G TG PKTD+YL+VP +AD+ EEVA + L +V Subject 1442 EAEAEARAAMSAPKRYFDTKLNRWSSELFDLKLHEAIVDGYSEATNTAYEKIAQMAEWATDFDEFLKHRKQWVKSGSATGGPKTDLYLRVPAEYRDMVADITEEVAVGVNMALHKV 1789
Range 2: 1797 to 1904 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
36.8 bits(74) | 0.0 | 15/36(42%) | 0/36(0%) | Minus/Plus |
Query 38 CA*ISQHSLRSPSSWNWSRRHWLIMSRTLIRATSAK 145 CA*I Q L SPS W ++H + ++ T++RA S + Subject 1797 CA*IKQQRLSSPSLWQL*KKHCVTINPTVLRAISQR 1904
Range 3: 1769 to 1939 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
66.9 bits(140) | 0.0 | 26/57(46%) | 0/57(0%) | Minus/Plus |
Query 3 DMTIVVLKRVRLNKSALFEIPQFVELEQEALADYEPNAYSRNFCKMKPGKEGGRALY 173 +M + + R+RLNK+A FE P+FV + +EAL DY+PN+++R F K + G+ R+LY Subject 1769 NMALHKVARLRLNKAATFEFPEFVAIVKEALRDYKPNSFTRYFTKKEVGRANPRSLY 1939