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Queries

Nucleotide Sequence (574 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 10 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
58
116
174
232
290
348
406
464
522
574

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
291.6 291.6 33% 1.566e-92 79% APT70074

Alignments

capsid protein [Alternaria alternata partitivirus 1]

Sequence ID: gb|APT70074.1| Length: 501 Number of Matches: 1

Range 1: 310 to 500 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
291.6 bits(745) 0.0 151/191(79%) 0/191(0%) Plus/Plus
Query        1  KWYNVGLPNSELKKLPGYKLEGDYLTEVEQLMDQARSAKRERITPRFDPAYEPTSYKISDGTITSSTGAYGARLHWDPQLWLDYENFVNEVASVAMFSLSMPIETTGTYAWVLPVEKRTDNTSAVFAKLPKASVPTQTWVXXXXXXXXXXXXHRRSTWYKESDSLTNITGLRLRYIQAAIKTPSPVEQYGT  573
                KWY+ GL  + ++K   YK E  YL EV +LM QA++AKRERITP  D AY+P SY ISDG+++SS GAYGARLHWDPQLWLDYENFVNEVASVAMFSLSMP+ETTGTYAWVLPVEKRTD+++AVF KLPKASVPTQTW+LALLLQSSTLP  RRSTWY ESD+LTNITGLRLRYIQAAIKTPSPVEQYGT
Subject    310  KWYHTGLDPTAVRKTTSYKTETGYLEEVNELMKQAKAAKRERITPILDSAYKPESYTISDGSVSSSPGAYGARLHWDPQLWLDYENFVNEVASVAMFSLSMPVETTGTYAWVLPVEKRTDSSAAVFCKLPKASVPTQTWILALLLQSSTLPFSRRSTWYTESDALTNITGLRLRYIQAAIKTPSPVEQYGT  500

Nucleotide Sequence (563 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 10 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
57
114
171
228
285
342
399
456
513
563

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
331.3 331.3 31% 4.286e-107 90% APT70073

Alignments

RNA-dependent RNA polymerase [Alternaria alternata partitivirus 1]

Sequence ID: gb|APT70073.1| Length: 571 Number of Matches: 1

Range 1: 55 to 227 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
331.3 bits(848) 0.0 155/173(90%) 0/173(0%) Plus/Plus
Query       39  PSVTKSFIAKAPLSTYSKPEYTLECTETMQYLGKMDHYPFNNSVPKFDSWFRSVLKSKAPNVVLHLEETYLRDPCTPDRVMKFMKLFDRRWKRMPTGRLMTEAKQIVSEMFSAVGKVEPIDFNFAGWHEILPHLDMSSSPGLPLRREYATQGECLGHIYDKTKRLNHIAKPKH  557
                PSVT SFIAKAPLSTYSKPEYTLECTETMQYLGKMDHY FNNSVPKFD WFR VLKSKAP+VVLHLEETY RDPCTP+RVMKFMKLFDRRWKRMPTG +M +AK+IVSEMFS VGKV+PIDFN+AGWHEILPHLDMSSSPGLPLRREYATQGECLGHIYDKTKRLNH AK  H
Subject     55  PSVTTSFIAKAPLSTYSKPEYTLECTETMQYLGKMDHYAFNNSVPKFDPWFRHVLKSKAPDVVLHLEETYQRDPCTPERVMKFMKLFDRRWKRMPTGNVMKQAKEIVSEMFSKVGKVDPIDFNYAGWHEILPHLDMSSSPGLPLRREYATQGECLGHIYDKTKRLNHFAKFLH  227

Nucleotide Sequence (282 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 10 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
29
58
87
116
145
174
203
232
261
282

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
181.8 181.8 33% 5.271e-52 89% APT70074

Alignments

capsid protein [Alternaria alternata partitivirus 1]

Sequence ID: gb|APT70074.1| Length: 501 Number of Matches: 1

Range 1: 79 to 171 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
181.8 bits(460) 0.0 83/93(89%) 0/93(0%) Minus/Plus
Query        3  SLSGYRERILSPFKTDKYFHMVSSSYQRLISVKPSIPARFSYEEFLHCSALQLYQRMENVKFDALGVKPPAQNRIPLPRNLRVFQPLWSILAN  281
                SLSGYRERILSPFKTDK+FH+VS+SYQRLI+VKPSIP+RF+YEEFLHCSALQLYQR+ENVKFDALGVKP A NRIPLPRNLRVFQP+WSILAN
Subject     79  SLSGYRERILSPFKTDKFFHIVSASYQRLINVKPSIPSRFTYEEFLHCSALQLYQRIENVKFDALGVKPAAPNRIPLPRNLRVFQPIWSILAN  171

Nucleotide Sequence (199 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 10 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
20
40
60
80
100
120
140
160
180
199

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
127.1 127.1 33% 1.639e-32 85% APT70074

Alignments

capsid protein [Alternaria alternata partitivirus 1]

Sequence ID: gb|APT70074.1| Length: 501 Number of Matches: 1

Range 1: 98 to 163 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
127.1 bits(318) 0.0 56/66(85%) 0/66(0%) Minus/Plus
Query        1  HMVSSSFQRLISVKPSIPARFSYEEFLHCSALHLYQRMENVKFDALGIKPPAPNRIPLPRNLRVFQ  198
                H+VS+S+QRLI+VKPSIP+RF+YEEFLHCSAL LYQR+ENVKFDALG+KP APNRIPLPRNLRVFQ
Subject     98  HIVSASYQRLINVKPSIPSRFTYEEFLHCSALQLYQRIENVKFDALGVKPAAPNRIPLPRNLRVFQ  163

Nucleotide Sequence (396 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 10 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
40
80
120
160
200
240
280
320
360
396

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
217.6 217.6 33% 5.56e-65 85% APT70074

Alignments

capsid protein [Alternaria alternata partitivirus 1]

Sequence ID: gb|APT70074.1| Length: 501 Number of Matches: 1

Range 1: 131 to 260 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
217.6 bits(553) 0.0 111/130(85%) 0/130(0%) Plus/Plus
Query        1  LYQRMENVKFDALGIKPPAPNRIPLPRNLRVFQPLWSILANIGTVDDDELGVQYIPDAVXXXXXXXXXXHDIEGLLSCTLYDWKSSWNSVLAARTTRPSYEQRDGYRTTLDSNESPALKKEELIKRISQA  390
                LYQR+ENVKFDALG+KP APNRIPLPRNLRVFQP+WSILANIGTVDDDEL  QYIPDAVLPDSDDLDS HDIEGLLSCTLYDWKSSWNSVLAAR TRPSY+ RDGYRTTL+SNE+P +KK++LI+RI+ A
Subject    131  LYQRIENVKFDALGVKPAAPNRIPLPRNLRVFQPIWSILANIGTVDDDELRAQYIPDAVLPDSDDLDSEHDIEGLLSCTLYDWKSSWNSVLAARETRPSYQHRDGYRTTLESNEAPEVKKQDLIRRIATA  260

Nucleotide Sequence (191 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 10 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
20
40
60
80
100
120
140
160
180
191

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
122.9 122.9 33% 6.138e-31 89% APT70074

Alignments

capsid protein [Alternaria alternata partitivirus 1]

Sequence ID: gb|APT70074.1| Length: 501 Number of Matches: 1

Range 1: 77 to 139 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
122.9 bits(307) 0.0 56/63(89%) 0/63(0%) Plus/Plus
Query        3  GLSLSGYRERILSPFKTDKYFHMVSSSYQRLISVKPSIPARFSYEEFLHCSALQLYQRMENVK  191
                GLSLSGYRERILSPFKTDK+FH+VS+SYQRLI+VKPSIP+RF+YEEFLHCSALQLYQR+ENVK
Subject     77  GLSLSGYRERILSPFKTDKFFHIVSASYQRLINVKPSIPSRFTYEEFLHCSALQLYQRIENVK  139

Nucleotide Sequence (171 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 10 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
18
36
54
72
90
108
126
144
162
171

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
114.4 114.4 33% 4.736e-28 89% APT70074

Alignments

capsid protein [Alternaria alternata partitivirus 1]

Sequence ID: gb|APT70074.1| Length: 501 Number of Matches: 1

Range 1: 107 to 163 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
114.4 bits(285) 0.0 51/57(89%) 0/57(0%) Minus/Plus
Query        1  LISVKPSIPARFSYEEFLHCSALQLYQRMENVKFDALGIKPPAPNRIPLPRNLRVFQ  171
                LI+VKPSIP+RF+YEEFLHCSALQLYQR+ENVKFDALG+KP APNRIPLPRNLRVFQ
Subject    107  LINVKPSIPSRFTYEEFLHCSALQLYQRIENVKFDALGVKPAAPNRIPLPRNLRVFQ  163

Nucleotide Sequence (306 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 10 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
31
62
93
124
155
186
217
248
279
306

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
189.1 189.1 33% 3.819e-54 88% APT70073

Alignments

RNA-dependent RNA polymerase [Alternaria alternata partitivirus 1]

Sequence ID: gb|APT70073.1| Length: 571 Number of Matches: 1

Range 1: 266 to 366 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
189.1 bits(479) 0.0 89/101(88%) 0/101(0%) Minus/Plus
Query        3  VKVMEMRYCIPLVKRFSDMFGKTPYPVGRNMTKALPFIIDNLLDDKKFGLVTDISKLDTSVGPDWIDWAFSQLKSFFDMGMTASSETRNSHVFDFLHYYFK  305
                VKV+EMRYCIPL+KRFS+MFGKTPYPVGRNMTKALPFIID+LL DKKFGLVTDISKLDTSVGPDWIDWAFSQLKSFFD G T SSE R+S+VFDFLH+YFK
Subject    266  VKVIEMRYCIPLMKRFSEMFGKTPYPVGRNMTKALPFIIDHLLQDKKFGLVTDISKLDTSVGPDWIDWAFSQLKSFFDFGFTLSSERRDSNVFDFLHFYFK  366

Nucleotide Sequence (841 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 10 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
85
170
255
340
425
510
595
680
765
841

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
497.7 497.7 33% 1.466e-170 92% APT70073

Alignments

RNA-dependent RNA polymerase [Alternaria alternata partitivirus 1]

Sequence ID: gb|APT70073.1| Length: 571 Number of Matches: 1

Range 1: 264 to 541 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
497.7 bits(1280) 0.0 255/278(92%) 0/278(0%) Plus/Plus
Query        7  AEVKVMEMRYCIPLVKRFSDMFGKTPYPVGRNMTKALPFIIDNLLDDKKFGLVTDISKLDTSVGPDWIDWAFSQLKSFFDMGMTASSETRNSHVFDFLHYYFKRTPILLPSGQLIKKAGGVPSGSGFXXXXXXXXXXXXXXYSRLRMGHKKPDIIKMFVVGDDMATSDDHDFSIEEFSHYMSQLGFEINPSKVMFSDKGIELKFLGYSKRGGGLYRPIEELLQTAFFPEKYVGNPNRSRQRILGQSIAAGLSNSFFDKCNYWMEELVTLTSTLDPDEV  840
                AEVKV+EMRYCIPL+KRFS+MFGKTPYPVGRNMTKALPFIID+LL DKKFGLVTDISKLDTSVGPDWIDWAFSQLKSFFD G T SSE R+S+VFDFLH+YFKRTPILLPSGQL+KKAGGVPSGSGFTQLVDTLVTTLAT YSRLRMGH K  I KMFVVGDDMATS DHDFSIEEFSH M QLGFEINPSKVMFS+KGIELKFLGYSKRGGGLYRPIEELLQTAFFPEKYVGNPNRSRQRILGQSIAAGLSNSFFDKCNYWMEELVTL+STLDPDEV
Subject    264  AEVKVIEMRYCIPLMKRFSEMFGKTPYPVGRNMTKALPFIIDHLLQDKKFGLVTDISKLDTSVGPDWIDWAFSQLKSFFDFGFTLSSERRDSNVFDFLHFYFKRTPILLPSGQLVKKAGGVPSGSGFTQLVDTLVTTLATVYSRLRMGHTKDQIFKMFVVGDDMATSVDHDFSIEEFSHIMGQLGFEINPSKVMFSNKGIELKFLGYSKRGGGLYRPIEELLQTAFFPEKYVGNPNRSRQRILGQSIAAGLSNSFFDKCNYWMEELVTLSSTLDPDEV  541

Nucleotide Sequence (348 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 10 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
35
70
105
140
175
210
245
280
315
348

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
124.4 124.4 22% 9.87e-31 89% APT70074

Alignments

capsid protein [Alternaria alternata partitivirus 1]

Sequence ID: gb|APT70074.1| Length: 501 Number of Matches: 1

Range 1: 64 to 139 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
124.4 bits(311) 0.0 68/76(89%) 0/76(0%) Plus/Plus
Query      121  PGYAEGNAAXXXXXXXXXXXRERILSPFKTDKYFHMVSSSYQRLISVKPSIPARFSYEEFLHCSALQLYQRMENVK  348
                PG+AEGNAALLSYGLSLSGYRERILSPFKTDK+FH+VS+SYQRLI+VKPSIP+RF+YEEFLHCSALQLYQR+ENVK
Subject     64  PGFAEGNAALLSYGLSLSGYRERILSPFKTDKFFHIVSASYQRLINVKPSIPSRFTYEEFLHCSALQLYQRIENVK  139