Queries
Nucleotide Sequence (421 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
260.0 | 792.2 | 33% | 1.214e-67 | 40% | AF057136.1 | |
292.5 | 1555.6 | 31% | 1.931e-77 | 88% | KX274274.1 | |
281.5 | 1431.9 | 31% | 3.946e-74 | 80% | KT948710.1 | |
276.9 | 1355.4 | 30% | 9.451e-73 | 76% | KR054734.1 | |
269.1 | 984.2 | 33% | 2.091e-70 | 54% | AY368172.2 |
Alignments
Rupestris stem pitting associated virus 1, complete genome
Sequence ID: AF057136.1 Length: 8744 Number of Matches: 6
Range 1: 1193 to 1561 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
260.0 bits(561) | 0.0 | 104/123(85%) | 0/123(0%) | Minus/Plus |
Query 27 GSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVSLIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGNVHFNRQRAPYSLGVSHWLNSPFSVEHKFAGAIS 395 GSLLMPNISKLVISF CRMMPNALARLSSSFRE SLDSFVY+LEPFNFSV+L+D+TPDFFEHLFLFSCLNELIEED+EEVMD+SWFGLG++ FNRQRAP+ LG S+WLNS FSVEHKF+G I+ Subject 1193 GSLLMPNISKLVISFFCRMMPNALARLSSSFRECSLDSFVYSLEPFNFSVNLVDITPDFFEHLFLFSCLNELIEEDVEEVMDNSWFGLGDLQFNRQRAPFFLGSSYWLNSKFSVEHKFSGTIN 1561
Range 2: 1192 to 1560 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
166.9 bits(358) | 0.0 | 84/123(68%) | 0/123(0%) | Plus/Minus |
Query 28 LMAPANLCSTENGELSQCDTPSEYGAL*RLKCTLPSPNHELXXXXXXXXXXXXLRQENKNRCSKKSGVTSIRLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREP 396 LM P NLCSTEN ELSQ + P + GAL RL C PSPN ELS+TSS SSSI+S RQE +N+CSKKSGV S +LTEKLKGS TNESSE SRKLE++LA A GIIR KND+T+ E+LGI++EP Subject 1192 LMVPENLCSTENLELSQYEDPRKNGALWRLNCKSPSPNQELSMTSSTSSSINSFRQEKRNKCSKKSGVISTKLTEKLKGSSEYTNESSEHSRKLEESLASAFGIIRQKNDMTNLEMLGISKEP 1560
Range 3: 1184 to 1558 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
108.7 bits(231) | 0.0 | 56/125(45%) | 0/125(0%) | Plus/Minus |
Query 30 DGTCKLMLDREWRVKPV*YP**IWSPLTVKVHIAKSKP*TIHNLLNVLFNQLIEAGEQK*VLKEIRGHIYQANRKIERLKGVDKRVK*SFAET*RQPG*GIRHHPTQK*YHQL*NIRHQ*GTTLP 404 DG KL+L+ ++ V+P+* P PL +++ + KSKP +H+L NVL +QLI AGE+K*+LKEIR +I+ N KI+ LK V K + + ++ R+PG I HHP ++*Y QL N+ H+ T P Subject 1184 DGA*KLVLN*KFGVEPI*RPKKERGPLAIEL*VPKSKPRIVHDLFNVLLDQLI*AGEEK*MLKEIRSYIH*INGKIKGLK*VHK*I*RTLSKARREPGECIWHHPAKE*YDQLRNVGHKQRATPP 1558
Range 4: 1206 to 1559 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
94.1 bits(199) | 0.0 | 55/118(47%) | 0/118(0%) | Minus/Plus |
Query 29 CLIFQSW*YHFCVG*CLMP*PGCLQVSAKLHLTRLSTPLSLSIFRLA**M*PLISLSTYFCSPASMS*LKRTLRRLWIVHGLDLAMCTLTVRGLHIH*GYHTGLTLHSLSSISLQVPS 382 C F SW YH G*C M PG L + L T LS IF L * +* LISLS YF SPA MS* +RTL+R W + GLDL RG G H G T + S S Q PS Subject 1206 CPTFLSWSYHSFAG*CQMHSPGSLLAFESVR*IHLCTHLSPLIFPLI*WI*LLISLSIYFSSPA*MS*SRRTLKRSWTILGLDLGTYNSIARGPRSFLGLHIGSTPNFQLSTSFQAPS 1559
Range 5: 1192 to 1581 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
85.8 bits(181) | 0.0 | 52/130(40%) | 0/130(0%) | Minus/Plus |
Query 7 WFPIDA*YFKAGDIIFVSDDA*CLSQVVFKFPRNFT*LVCLRP*AFQFFG*PDRCDP*FL*APIFVLLPQ*AD*RGH*GGYG*FMVWTWQCAL*PSEGSIFTRGITLA*LSILCRA*VCRCHQPTKHTQH 396 W A +F G II + DDA C Q +F R F +C+ *A FF * + *FL*A I +LLP+* D G * G+G F+VWTW + EG + + LA L I A V R HQ + H + Subject 1192 WLFAYAQHF*VGHIILLPDDAKCTRQALF*LSRVFARFICVLT*AL*FFR*FSGYNS*FL*AFISLLLPK*VDRGGR*RGHGQFLVWTWGLTIQSPEGPVLSWVFILAQLQIFS*AQVFRHHQFSNHASY 1581
Range 6: 1215 to 1559 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
76.7 bits(161) | 0.0 | 49/115(43%) | 0/115(0%) | Plus/Minus |
Query 29 *WHLQTYARQRMES*ASVIPLVNMEPSDG*SAHCQVQTMNYP*PPQCPLQSAH*GRRTKIGAQRNQGSHLSG*PKN*KAQGRRQTSQVKFRGNLKTTWLRH*ASSDTKMISPALK 373 *W L+T A+ ++ S*A++ PS * QVQT N P*P Q P +S H GRR +I AQRNQ + * KN*+AQ Q + + K W H ASS +MI P K Subject 1215 *WCLKTCAQLKIWS*ANMKTQERTGPSGD*IVSPQVQTKNCP*PLQRPPRSTHLGRRREINAQRNQELYPLN*RKN*RAQVSTQMNLANTLES*KRAWRVHLASSGKRMI*PT*K 1559
Grapevine rupestris stem pitting associated virus isolate SK704 A, complete genome
Sequence ID: KX274274.1 Length: 8725 Number of Matches: 6
Range 1: 1192 to 1560 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
292.5 bits(632) | 0.0 | 120/123(98%) | 0/123(0%) | Minus/Plus |
Query 27 GSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVSLIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGNVHFNRQRAPYSLGVSHWLNSPFSVEHKFAGAIS 395 GSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSV+LIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGNVHFNRQRAPYSLG+SHWLNSPFSVEHKFAGAI+ Subject 1192 GSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGNVHFNRQRAPYSLGISHWLNSPFSVEHKFAGAIN 1560
Range 2: 1179 to 1562 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
263.2 bits(568) | 0.0 | 112/128(88%) | 0/128(0%) | Minus/Plus |
Query 25 LEVRWFPIDA*YFKAGDIIFVSDDA*CLSQVVFKFPRNFT*LVCLRP*AFQFFG*PDRCDP*FL*APIFVLLPQ*AD*RGH*GGYG*FMVWTWQCAL*PSEGSIFTRGITLA*LSILCRA*VCRCHQP 408 L WFPIDA YFKAGDIIFVSDDA*CL Q++FKFPRNFT*L+CLR * FQFFG* DRCDP*FL*APIF+LLPQ*AD*RG+*GGYG*FMVWTWQCAL*PSEGSIFTR ITLA*L ILC A*VCRCHQP Subject 1179 LWAEWFPIDAQYFKAGDIIFVSDDA*CLGQIIFKFPRNFT*LICLRS*TFQFFG*LDRCDP*FL*APIFILLPQ*AD*RGY*GGYG*FMVWTWQCAL*PSEGSIFTRDITLA*LPILC*A*VCRCHQP 1562
Range 3: 1190 to 1561 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
251.2 bits(542) | 0.0 | 111/124(90%) | 0/124(0%) | Plus/Minus |
Query 26 G*WHLQTYARQRMES*ASVIPLVNMEPSDG*SAHCQVQTMNYP*PPQCPLQSAH*GRRTKIGAQRNQGSHLSG*PKN*KAQGRRQTSQVKFRGNLKTTWLRH*ASSDTKMISPALKY*ASIGNH 397 G*WHLQTYA+QRM S*ASVI LVNMEPSDG*SAHCQVQTMNYP*PPQ PLQSAH*GRR KIGAQRNQGSHLS *PKN*K Q RRQ SQVKFRGNLK W RH*ASSDTKMISPALKY ASIGNH Subject 1190 G*WHLQTYAQQRMGS*ASVISLVNMEPSDG*SAHCQVQTMNYP*PPQYPLQSAH*GRRIKIGAQRNQGSHLSS*PKN*KVQERRQMSQVKFRGNLKIIWPRH*ASSDTKMISPALKYWASIGNH 1561
Range 4: 1191 to 1559 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
249.9 bits(539) | 0.0 | 120/123(98%) | 0/123(0%) | Plus/Minus |
Query 28 LMAPANLCSTENGELSQCDTPSEYGAL*RLKCTLPSPNHELXXXXXXXXXXXXLRQENKNRCSKKSGVTSIRLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREP 396 LMAPANLCSTENGELSQCD PSEYGAL*RLKCTLPSPNHELSITSS+SSSISSLRQENKNRCSKKSGVTSI+LTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREP Subject 1191 LMAPANLCSTENGELSQCDIPSEYGAL*RLKCTLPSPNHELSITSSISSSISSLRQENKNRCSKKSGVTSIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREP 1559
Range 5: 1183 to 1557 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
249.9 bits(539) | 0.0 | 112/125(90%) | 0/125(0%) | Plus/Minus |
Query 30 DGTCKLMLDREWRVKPV*YP**IWSPLTVKVHIAKSKP*TIHNLLNVLFNQLIEAGEQK*VLKEIRGHIYQANRKIERLKGVDKRVK*SFAET*RQPG*GIRHHPTQK*YHQL*NIRHQ*GTTLP 404 DGTCKLML+REW VKPV*YP**IWSPLTVKVHIAKSKP*TIHNLLN+LFNQLIEAGE K*VLKEIRGHIYQ NRKIER K VDK VK*SFAET*R G GIRHHPTQK*YHQL*NI HQ*GTT P Subject 1183 DGTCKLMLNREWGVKPV*YP**IWSPLTVKVHIAKSKP*TIHNLLNILFNQLIEAGE*K*VLKEIRGHIYQVNRKIERFKSVDK*VK*SFAET*R*SGQGIRHHPTQK*YHQL*NIGHQ*GTTPP 1557
Range 6: 1184 to 1558 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
249.0 bits(537) | 0.0 | 112/125(90%) | 0/125(0%) | Minus/Plus |
Query 29 GKVVPY*CLIFQSW*YHFCVG*CLMP*PGCLQVSAKLHLTRLSTPLSLSIFRLA**M*PLISLSTYFCSPASMS*LKRTLRRLWIVHGLDLAMCTLTVRGLHIH*GYHTGLTLHSLSSISLQVPS 403 G VVPY*C IFQSW*YHFCVG*CLMP P LQVSAKLHLT LST L+LSIFRL **M*PLISLSTYF SPASMS*LKR LRRLWIVHGLDLAMCTLTVRGLHIH*GYHTGLT HSL SISLQVPS Subject 1184 GGVVPY*CPIFQSW*YHFCVG*CLMPWPDYLQVSAKLHLTHLSTLLNLSIFRLT**M*PLISLSTYFYSPASMS*LKRILRRLWIVHGLDLAMCTLTVRGLHIH*GYHTGLTPHSLLSISLQVPS 1558
Grapevine rupestris stem pitting associated virus isolate VF1, partial genome
Sequence ID: KT948710.1 Length: 8716 Number of Matches: 6
Range 1: 1193 to 1561 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
281.5 bits(608) | 0.0 | 117/123(95%) | 0/123(0%) | Minus/Plus |
Query 27 GSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVSLIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGNVHFNRQRAPYSLGVSHWLNSPFSVEHKFAGAIS 395 GSLLMPNISKLVISFLCRMMPN LARLSSSFRETSLDSFVYALEPFNFSV+LIDVTPDFFEHLFLFSC NELIEEDIEEVMDSSWFGLGNV+FNRQRAPYSLGVSHWLNSPFSVE KFAGAI+ Subject 1193 GSLLMPNISKLVISFLCRMMPNVLARLSSSFRETSLDSFVYALEPFNFSVNLIDVTPDFFEHLFLFSCRNELIEEDIEEVMDSSWFGLGNVYFNRQRAPYSLGVSHWLNSPFSVESKFAGAIN 1561
Range 2: 1192 to 1560 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
236.1 bits(509) | 0.0 | 116/123(94%) | 0/123(0%) | Plus/Minus |
Query 28 LMAPANLCSTENGELSQCDTPSEYGAL*RLKCTLPSPNHELXXXXXXXXXXXXLRQENKNRCSKKSGVTSIRLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREP 396 LMAPANL STENGELSQCDTPSEYGAL*RLK TLPSPNHELSITSSMSSSISSLRQENKNRCSKKSGVTSI+LTEKLKGSRA*TNESSEVSRKLED+LA+ LGIIRHKNDITSFE+LGINREP Subject 1192 LMAPANLLSTENGELSQCDTPSEYGAL*RLKYTLPSPNHELSITSSMSSSISSLRQENKNRCSKKSGVTSIKLTEKLKGSRA*TNESSEVSRKLEDSLARTLGIIRHKNDITSFEMLGINREP 1560
Range 3: 1184 to 1558 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
231.1 bits(498) | 0.0 | 103/125(82%) | 0/125(0%) | Plus/Minus |
Query 30 DGTCKLMLDREWRVKPV*YP**IWSPLTVKVHIAKSKP*TIHNLLNVLFNQLIEAGEQK*VLKEIRGHIYQANRKIERLKGVDKRVK*SFAET*RQPG*GIRHHPTQK*YHQL*NIRHQ*GTTLP 404 DGTCKL L+REWRVKP+*YP**IWSPLTVKVHIA SKP*TIH LLNVL NQLI AGEQK*VLKEIRGHIYQ N +IER K +DK +K*SF ET*RQPG* I HH TQK*YHQL*N+ HQ*GTT P Subject 1184 DGTCKLALNREWRVKPM*YP**IWSPLTVKVHIA*SKP*TIHYLLNVLLNQLIAAGEQK*VLKEIRGHIYQVN*EIERFKSIDK*IK*SFTET*RQPG*DIGHHSTQK*YHQL*NVGHQ*GTTPP 1558
Range 4: 1191 to 1562 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
228.3 bits(492) | 0.0 | 100/124(81%) | 0/124(0%) | Plus/Minus |
Query 26 G*WHLQTYARQRMES*ASVIPLVNMEPSDG*SAHCQVQTMNYP*PPQCPLQSAH*GRRTKIGAQRNQGSHLSG*PKN*KAQGRRQTSQVKFRGNLKTTWLRH*ASSDTKMISPALKY*ASIGNH 397 G*WHLQT ++QRMES*A+VIPLVNMEPSDG*S HC VQTMNYP PPQCP QSAH GRRTKIGAQRNQGSHLS * +N*K Q RQ +QVKF GNLKT WL H AS DTKMISPALK ASIGNH Subject 1191 G*WHLQTCSQQRMES*ANVIPLVNMEPSDG*STHCLVQTMNYPLPPQCPPQSAHCGRRTKIGAQRNQGSHLSS*LRN*KVQEHRQMNQVKFHGNLKTAWLGHWASFDTKMISPALKCWASIGNH 1562
Range 5: 1180 to 1563 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.4 bits(490) | 0.0 | 103/128(80%) | 0/128(0%) | Minus/Plus |
Query 25 LEVRWFPIDA*YFKAGDIIFVSDDA*CLSQVVFKFPRNFT*LVCLRP*AFQFFG*PDRCDP*FL*APIFVLLPQ*AD*RGH*GGYG*FMVWTWQCAL*PSEGSIFTRGITLA*LSILCRA*VCRCHQP 408 L WFPIDA +FKAGDIIFVS+DA C SQ VFKFP NFT* +CL * FQF * DRCDP*FL*APIFVLLPQ*AD* GH*GG G*FMVWT QC L*PSEGSIFTRGITLA*LSILC VCRCHQP Subject 1180 LWAEWFPIDAQHFKAGDIIFVSNDAQCPSQAVFKFP*NFT*FICLCS*TFQFLS*LDRCDP*FL*APIFVLLPQ*AD*GGH*GGNG*FMVWTRQCVL*PSEGSIFTRGITLA*LSILC*EQVCRCHQP 1563
Range 6: 1185 to 1559 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.4 bits(490) | 0.0 | 102/125(82%) | 0/125(0%) | Minus/Plus |
Query 29 GKVVPY*CLIFQSW*YHFCVG*CLMP*PGCLQVSAKLHLTRLSTPLSLSIFRLA**M*PLISLSTYFCSPASMS*LKRTLRRLWIVHGLDLAMCTLTVRGLHIH*GYHTGLTLHSLSSISLQVPS 403 G VVPY*C FQSW*YHFCV *C M *PGCLQVS KLHL LS L+LSI +L **M*PLISLSTYFCSPA+MS*L+RTLRR WIVHGLD AMCTLTVRGLHIH*GYH GLTLHSL SLQVPS Subject 1185 GGVVPY*CPTFQSW*YHFCVE*CPMS*PGCLQVSVKLHLIHLSMLLNLSISQLT**M*PLISLSTYFCSPAAMS*LRRTLRR*WIVHGLD*AMCTLTVRGLHIH*GYHIGLTLHSLLRASLQVPS 1559
Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome
Sequence ID: KR054734.1 Length: 8753 Number of Matches: 6
Range 1: 1192 to 1560 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
276.9 bits(598) | 0.0 | 112/123(91%) | 0/123(0%) | Minus/Plus |
Query 27 GSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVSLIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGNVHFNRQRAPYSLGVSHWLNSPFSVEHKFAGAIS 395 GSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFV+ALEPFNFSV+LID+TPDFFEHLFLFSCLNELI EDIEE MD SWFGLGN+HFNRQRAPYSLGVSHW+ SPFSVEHKFAG I+ Subject 1192 GSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVHALEPFNFSVNLIDITPDFFEHLFLFSCLNELIAEDIEEAMDGSWFGLGNLHFNRQRAPYSLGVSHWIKSPFSVEHKFAGVIN 1560
Range 2: 1191 to 1559 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
235.7 bits(508) | 0.0 | 112/123(91%) | 0/123(0%) | Plus/Minus |
Query 28 LMAPANLCSTENGELSQCDTPSEYGAL*RLKCTLPSPNHELXXXXXXXXXXXXLRQENKNRCSKKSGVTSIRLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREP 396 LM PANLCSTENG+L QCDTP EYGAL*RLKC LPSPNHE SI SS+SS+ISSLRQENKNRCSKKSGV SI+LTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREP Subject 1191 LMTPANLCSTENGDLIQCDTPREYGAL*RLKCKLPSPNHEPSIASSISSAISSLRQENKNRCSKKSGVISIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREP 1559
Range 3: 1183 to 1551 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
219.2 bits(472) | 0.0 | 97/123(79%) | 0/123(0%) | Plus/Minus |
Query 36 TCKLMLDREWRVKPV*YP**IWSPLTVKVHIAKSKP*TIHNLLNVLFNQLIEAGEQK*VLKEIRGHIYQANRKIERLKGVDKRVK*SFAET*RQPG*GIRHHPTQK*YHQL*NIRHQ*GTTLP 404 TCKL+L+REWR PV*+P* IW PLTVKV IAKSKP* +H+ LN+L NQLIEAGEQK*+LKEIRG+I Q NRK+ERLK ++K VK*SFAET*RQPG*GIRHH TQK*YHQL*NIRHQ* TT P Subject 1183 TCKLVLNREWRFDPV*HP*GIWGPLTVKVQIAKSKP*AVHSFLNILCNQLIEAGEQK*MLKEIRGNINQVNRKVERLKSMNK*VK*SFAET*RQPG*GIRHHSTQK*YHQL*NIRHQ*RTTPP 1551
Range 4: 1184 to 1552 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
210.5 bits(453) | 0.0 | 96/123(78%) | 0/123(0%) | Minus/Plus |
Query 35 GKVVPY*CLIFQSW*YHFCVG*CLMP*PGCLQVSAKLHLTRLSTPLSLSIFRLA**M*PLISLSTYFCSPASMS*LKRTLRRLWIVHGLDLAMCTLTVRGLHIH*GYHTGLTLHSLSSISLQV 403 G VV Y*CLIFQSW*YHFCV *CLMP*PGCLQVSAKLHLT L LSLS F L * + PLISLS YFCSPASMS*L+R LR+LW HGLDLA+CTLTVRG HI *G HTG LHSL S SLQV Subject 1184 GGVVLY*CLIFQSW*YHFCVE*CLMP*PGCLQVSAKLHLTHLFMLLSLSTFLLT*LILPLISLSIYFCSPASMS*LQRILRKLWTAHGLDLAICTLTVRGPHIP*GCHTGSNLHSLLSTSLQV 1552
Range 5: 1179 to 1562 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
206.8 bits(445) | 0.0 | 97/128(76%) | 0/128(0%) | Minus/Plus |
Query 25 LEVRWFPIDA*YFKAGDIIFVSDDA*CLSQVVFKFPRNFT*LVCLRP*AFQFFG*PDRCDP*FL*APIFVLLPQ*AD*RGH*GGYG*FMVWTWQCAL*PSEGSIFTRGITLA*LSILCRA*VCRCHQP 408 L WF IDA*YFKAGDIIFVS+DA*CLSQVVFKFPRNFT*L+C *AFQ F * D P*FL*A IFVLLPQ*AD RG+*G YG MVWTWQ AL*PSEG IF RG+TL +SILC A VCRCH P Subject 1179 LWAEWFSIDA*YFKAGDIIFVSNDA*CLSQVVFKFPRNFT*LICSCS*AFQLFC*LD*YYP*FL*ASIFVLLPQ*ADCRGY*GSYGRLMVWTWQFAL*PSEGPIFPRGVTLDQISILC*AQVCRCH*P 1562
Range 6: 1190 to 1561 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
206.3 bits(444) | 0.0 | 98/124(79%) | 0/124(0%) | Plus/Minus |
Query 26 G*WHLQTYARQRMES*ASVIPLVNMEPSDG*SAHCQVQTMNYP*PPQCPLQSAH*GRRTKIGAQRNQGSHLSG*PKN*KAQGRRQTSQVKFRGNLKTTWLRH*ASSDTKMISPALKY*ASIGNH 397 G* HLQT A+QRME *+SV PL NM PSDG*SA+CQVQTM+ P* PQ PLQSAH*GRRTKI AQRNQG + S * K+*KAQ Q SQVKFRGNLKTTWLRH*AS DTKMISPALKY*ASI NH Subject 1190 G**HLQTCAQQRMEI*SSVTPLGNMGPSDG*SANCQVQTMSRP*LPQYPLQSAH*GRRTKIDAQRNQG*YQSS*QKS*KAQEHEQMSQVKFRGNLKTTWLRH*ASFDTKMISPALKY*ASIENH 1561
Rupestris stem pitting associated virus isolate RSPaV PN, complete genome
Sequence ID: AY368172.2 Length: 8743 Number of Matches: 6
Range 1: 1192 to 1560 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
269.1 bits(581) | 0.0 | 108/123(88%) | 0/123(0%) | Minus/Plus |
Query 27 GSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVSLIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGNVHFNRQRAPYSLGVSHWLNSPFSVEHKFAGAIS 395 GSLLMPNISKLV SF CRMMPNALARLSSSFRE+SLDSFVYALEPFNF+V+LIDVTPDFFEHLFLFSCLNEL+EE+IEEVMD+SWFGL NVHFNRQRAPYSLG SHWL+SPFSVEHKF G ++ Subject 1192 GSLLMPNISKLVTSFFCRMMPNALARLSSSFRESSLDSFVYALEPFNFAVNLIDVTPDFFEHLFLFSCLNELMEENIEEVMDNSWFGLSNVHFNRQRAPYSLGTSHWLSSPFSVEHKFTGIVN 1560
Range 2: 1191 to 1559 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
211.8 bits(456) | 0.0 | 104/123(85%) | 0/123(0%) | Plus/Minus |
Query 28 LMAPANLCSTENGELSQCDTPSEYGAL*RLKCTLPSPNHELXXXXXXXXXXXXLRQENKNRCSKKSGVTSIRLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREP 396 L P NLCSTE GELSQC+ PSEYGAL RLK TL SPNHELSITSS+ SSI+SLRQENKNRCSKKSGVTSI+ T KLKGSRA*TNESSE SRKLED+LAKALGIIR KND+TSFEILGINREP Subject 1191 LTIPVNLCSTEKGELSQCEVPSEYGALWRLK*TLLSPNHELSITSSIFSSINSLRQENKNRCSKKSGVTSIKFTAKLKGSRA*TNESSEDSRKLEDSLAKALGIIRQKNDVTSFEILGINREP 1559
Range 3: 1183 to 1545 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
139.9 bits(299) | 0.0 | 68/121(56%) | 0/121(0%) | Plus/Minus |
Query 42 KLMLDREWRVKPV*YP**IWSPLTVKVHIAKSKP*TIHNLLNVLFNQLIEAGEQK*VLKEIRGHIYQANRKIERLKGVDKRVK*SFAET*RQPG*GIRHHPTQK*YHQL*NIRHQ*GTTLP 404 KLML+R+ R +PV* *IWSPL ++V+IAKS+P* IHNLLN+ +Q IEAGEQK*+LK++RG+I Q K++R K +D+ VK* F +T* * +RHH +K* + L*NI H * TT P Subject 1183 KLMLNRKGRAEPV*SSQ*IWSPLAIEVNIAKSEP*IIHNLLNIFLHQFIEAGEQK*MLKKVRGNINQIYCKVKRFKSIDE*VK*RFTKT*G*SS*SVRHHSAEK*RN*L*NIGH**RTTPP 1545
Range 4: 1190 to 1543 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
126.2 bits(269) | 0.0 | 68/118(58%) | 0/118(0%) | Plus/Minus |
Query 44 TYARQRMES*ASVIPLVNMEPSDG*SAHCQVQTMNYP*PPQCPLQSAH*GRRTKIGAQRNQGSHLSG*PKN*KAQGRRQTSQVKFRGNLKTTWLRH*ASSDTKMISPALKY*ASIGNH 397 TYA+Q+ ES*ASV VNMEP *S HC V+TMNYP*PPQ S H*GRRTKI AQ++QG H S ++*K Q R+ SQVK NL+ L+ *AS KM ALKY A I NH Subject 1190 TYAQQKRES*ASVKFPVNMEPFGD*SEHC*VRTMNYP*PPQYFPPSIH*GRRTKIDAQKSQG*HQSNLLQS*KVQEHRRMSQVKIHENLRIV*LKR*ASFGRKMT*LALKYWALIENH 1543
Range 5: 1184 to 1549 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.4 bits(263) | 0.0 | 67/122(55%) | 0/122(0%) | Minus/Plus |
Query 38 GKVVPY*CLIFQSW*YHFCVG*CLMP*PGCLQVSAKLHLTRLSTPLSLSIFRLA**M*PLISLSTYFCSPASMS*LKRTLRRLWIVHGLDLAMCTLTVRGLHIH*GYHTGLTLHSLSSISLQ 403 G VV Y*C IFQS HF *CL * QV LHLT S L+L + * M PL LS YFCSPASM+* ++ LRRLWI+HG DLAM T +GLHIH HTG L L SISL+ Subject 1184 GGVVLY*CPIFQS*LRHFSAE*CLTL*LDYPQVFVNLHLTHSSMLLNLLTLQ*I*LMLPLTFLSIYFCSPASMN*WRKILRRLWIIHGSDLAMFTSIAKGLHIHWELHTGSALPFLLSISLR 1549
Range 6: 1179 to 1544 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
113.8 bits(242) | 0.0 | 66/122(54%) | 0/122(0%) | Minus/Plus |
Query 43 LEVRWFPIDA*YFKAGDIIFVSDDA*CLSQVVFKFPRNFT*LVCLRP*AFQFFG*PDRCDP*FL*APIFVLLPQ*AD*RGH*GGYG*FMVWTWQCAL*PSEGSIFTRGITLA*LSILCRA*V 408 L WF I+A YFKA +IF+ +DA* S + KF FT*L+ L * F D C P* *A IFVLLPQ* D +*GGYG*FMV T QC+L +GSIFT TLA LS+ C A*V Subject 1179 LWAEWFSINAQYFKASYVIFLPNDA*RFS*TILKFS*IFT*LIRLCS*TF*LCSKFD*CYP*LF*ASIFVLLPQ*IDGGKY*GGYG*FMVRT*QCSLQSPKGSIFTGNFTLAQLSLFC*A*V 1544
Nucleotide Sequence (915 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
723.2 | 3701.1 | 20% | 0 | 80% | KX274275.1 | |
716.3 | 3549.6 | 18% | 0 | 80% | AY368590.1 | |
713.1 | 3312.1 | 20% | 0 | 78% | KR528585.1 | |
707.2 | 2501.2 | 17% | 0 | 53% | KR054734.1 | |
698.9 | 2299.7 | 37% | 0 | 46% | KT948710.1 |
Alignments
Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome
Sequence ID: KX274275.1 Length: 8724 Number of Matches: 10
Range 1: 3766 to 4680 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
723.2 bits(1572) | 0.0 | 303/305(99%) | 0/305(0%) | Minus/Plus |
Query 1 ICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDF 915 ICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMF+SRLPC+FKKGSMTAAFADYAIFHNMHDF Subject 3766 ICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAIFHNMHDF 4680
Range 2: 3768 to 4679 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
658.1 bits(1430) | 0.0 | 298/304(98%) | 0/304(0%) | Plus/Minus |
Query 2 KSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTNLRLSKLYLYDFPSSNLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHXXXXXXXXXXEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSALSKLGKYVIFDPFRESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQ 913 KSCILWK+A*SAKAAV+EPFLK G+L+SNIGFTNLRLSKLYLYDFPSSNLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHSSSISRSLLIEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSALSKLGKYVIFDPFRESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQ Subject 3768 KSCILWKMA*SAKAAVMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSNLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHSSSISRSLLIEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSALSKLGKYVIFDPFRESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQ 4679
Range 3: 3766 to 4254 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
363.5 bits(787) | 0.0 | 155/163(95%) | 0/163(0%) | Plus/Minus |
Query 427 IHF*VPFD*IC*SSPR*DECYKFSFRSLHEALV*ETLSSPKCAKHNCQFSLFDVRS*HSSKPRL*IVKFLITYHASQTPQQAPLKFFRPLKTWKICYL*PVQRKQVKG*SFNFSQLIHLYTLRPVTNLFDMPNVFICYVKQSRYAPARINNLNFAIDITFGTD 915 IHF*VPFD*IC*S PR*D+CYKFSFRSLHEALV*ETLSSPKC KHNCQFSLFDVRS*HSSKPRL*IVKFLITYHASQT QQAPLKFFRPLKTWKICYL*PVQRKQVK *SFNFSQLIHLYTLRPVTNLFDMPNVFI YVKQSRYAPA INNLNF+IDITFGTD Subject 3766 IHF*VPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCTKHNCQFSLFDVRS*HSSKPRL*IVKFLITYHASQTSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPVTNLFDMPNVFIRYVKQSRYAPAWINNLNFSIDITFGTD 4254
Range 4: 4300 to 4680 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
246.7 bits(532) | 0.0 | 110/127(87%) | 0/127(0%) | Plus/Minus |
Query 1 EVMHIVEDCIISKGCSH*TFFEVTWQSRFKHRIYKPPALQVVPI*LSFEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*IDVTRRE*LNFIKDHAMTSL*ACNFPKEDFKGNDIP 381 E+MHIVE+ +ISK SH FFEVT S KH IYKP ALQVVPI*LSFEQPQYVTLF TQNSSIFLRIICALTRITSKRDESVTA+NKKT*IDVTRRE*LNFIKDHAMTSL*ACNFPKEDFKGN+IP Subject 4300 EIMHIVENGVISKSGSHGAFFEVTG*S*IKHWIYKPSALQVVPI*LSFEQPQYVTLFGTQNSSIFLRIICALTRITSKRDESVTADNKKT*IDVTRRE*LNFIKDHAMTSL*ACNFPKEDFKGNNIP 4680
Range 5: 3768 to 4238 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
348.8 bits(755) | 0.0 | 150/157(96%) | 0/157(0%) | Minus/Plus |
Query 443 LCQM*CQWRN*GY*SGRAHICSV*HNK*TH*ACRKDW*RASKYKGG*AAKS*TISP*PAFSERVKDNIFSKF*EGGKTSGVLAGGFDWRDK**EI*RFKALACWSVNF*HQTKRIDSCAWHIWGWKEFPIQELHEEI*RKICNIRLT*ASSSKFNQK 913 LCQM*CQWRN*GY*S RAHICSV*HN+*TH*ACRKDW*RASKYKGG*AAKS*TIS *PAFSERVKDNIFSKF*EGGKTSGVLAG FDWRDK**EI*RFKALACWSVNF*HQTKRIDSCAW+IWGWKEFPIQELHEEI*RKICNI LT*A SSKFNQK Subject 3768 LCQM*CQWRN*GY*SRRAHICSV*HNE*TH*ACRKDW*RASKYKGG*AAKS*TISS*PAFSERVKDNIFSKF*EGGKTSGVLAGRFDWRDK**EI*RFKALACWSVNF*HQTKRIDSCAWYIWGWKEFPIQELHEEI*RKICNICLT*AGSSKFNQK 4238
Range 6: 4281 to 4676 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
256.3 bits(553) | 0.0 | 114/132(86%) | 0/132(0%) | Minus/Plus |
Query 5 QIKEGGLGCRYL*SLP*ESYRPKGWSLRDL**SSAIPSWLHRSMSSCYSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEVARRKVI*VQLGEPEVCKSDV*I*TAMSLQKRFNDCSLC*LCNLPQYA* 400 QIKEGGLGC YL*SLP*ESYRPKGWSLRDL**SSAIPSWLHRSMSSCY Q*RFHLSCW*SLSKHI*FSKR*SYFGC TE*HIEVARRKVI*VQLGEP+VCKS+V* + LQKR +DC C*L + PQYA* Subject 4281 QIKEGGLGCCYL*SLP*ESYRPKGWSLRDL**SSAIPSWLHRSMSSCYPQ*RFHLSCW*SLSKHI*FSKR*SYFGCRTE*HIEVARRKVI*VQLGEPKVCKSNV*FKITL*LQKRLHDCRFC*LRHFPQYA* 4676
Range 7: 3767 to 4255 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
340.6 bits(737) | 0.0 | 155/163(95%) | 0/163(0%) | Plus/Minus |
Query 426 HPFLGPF*LNLLELA*VRRMLQIFLQIXXXXXCIGNSFQPQMCQAQLSILFV*CQKLTLQQAKALNR*ISHHLSRQSNPPASTPEVFPPSQNLENMLSLTRSEKAGQGLIV*LFAAHPPLYFEARYQSFRHA*CVHLLCQTEQICARPD**PQFRH*HHIWHR 914 HPFLGPF*LNLLE A*VR+MLQIFLQISS*SSCIGNSFQPQM QAQLSILFV*CQKLTLQQAKALNR*ISHHLSRQSN PASTPEVFPPSQNLENMLSLTRSEKAGQ LIV*LFAAHPPLYFEARYQSFRHA*CVH LCQTEQICAR D**PQF H*HHIWHR Subject 3767 HPFLGPF*LNLLEPA*VRQMLQIFLQISS*SSCIGNSFQPQMYQAQLSILFV*CQKLTLQQAKALNR*ISHHLSRQSNLPASTPEVFPPSQNLENMLSLTRSEKAGQELIV*LFAAHPPLYFEARYQSFRHA*CVHSLCQTEQICARLD**PQFLH*HHIWHR 4255
Range 8: 4349 to 4678 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
225.1 bits(485) | 0.0 | 92/110(84%) | 0/110(0%) | Plus/Minus |
Query 3 SHAYCGRLHNQQRLQSLNLF*SDMAV*IQTSDLQTSGSPSCTYMTFLRATSICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQEGIAELHQRSRNDQP 332 +HAYCG+ NQQ+ QS +LF*S + QT DLQT GSPSCTYMTFLRATSICHSV+HPK*LYLFENHMCFDKDHQQER*KRHC *QEDIDRCNQEGIAELHQRSRNDQP Subject 4349 NHAYCGKWRNQQKRQSWSLF*SYRVILNQTLDLQTFGSPSCTYMTFLRATSICHSVRHPK*LYLFENHMCFDKDHQQER*KRHCG*QEDIDRCNQEGIAELHQRSRNDQP 4678
Range 9: 3767 to 4411 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
415.7 bits(901) | 0.0 | 205/215(95%) | 0/215(0%) | Minus/Plus |
Query 270 SVPNVMSMAKLRLLIRAGAYLLCLT*QMNTLGMSKRLVTGLKV*RWMSCEKLNDQPLTCFL*TGQR*HIFQVLRGRKNFRGACWGV*LA**VMRNLTIQSLGLLECQLLTSNKEN*QLCLAHLGLERVSYTRAS*RDLKENL*HSSHLGEL*QIQSKGT*KWMKNVXXXXXXXXXXXAGMSLPLKSSLGKLQA*RLVIA*SLMKFSYSLLVTSIY 914 SVPNVMSM KLRLLI+AGAYLLCLT*+MNTLGMSKRLVTGLKV*RWMSCEKLNDQ LTCFL*TGQR*HIFQVLRGRKNFRGACW V*LA**VMRNLTIQSLGLLECQLLTSNKEN*QLCL HLGLERVSYTRAS*RDLKENL*H SHLG L*QIQSKGT*KWMK+VRW*RQANQRRRAGM LPLKSSLGKLQA*RLVIA*SLMKFSYSLLVTSIY Subject 3767 SVPNVMSMEKLRLLIQAGAYLLCLT*RMNTLGMSKRLVTGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLRGRKNFRGACWEV*LA**VMRNLTIQSLGLLECQLLTSNKEN*QLCLVHLGLERVSYTRAS*RDLKENL*HLSHLGGL*QIQSKGT*KWMKSVRW*RQANQRRRAGMLLPLKSSLGKLQA*RLVIA*SLMKFSYSLLVTSIY 4411
Range 10: 4466 to 4675 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.0 bits(262) | 0.0 | 56/70(80%) | 0/70(0%) | Minus/Plus |
Query 6 KAHMILKKIELFWVLNRVTY*GCSKESHIGTTWRAGGL*IRCLNLDCHVTSKKVQ*LQPLLIMQSSTICM 215 KAHMILKKIELFWV NRVTY*GCSKESHIGTTWRA GL*I+CL D VTSKK *L LLI STICM Subject 4466 KAHMILKKIELFWVPNRVTY*GCSKESHIGTTWRAEGL*IQCLIQDYPVTSKKAP*LPLLLITPFSTICM 4675
Rupestris stem pitting associated virus strain Syrah, complete genome
Sequence ID: AY368590.1 Length: 8742 Number of Matches: 11
Range 1: 3766 to 4680 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
716.3 bits(1557) | 0.0 | 300/305(98%) | 0/305(0%) | Minus/Plus |
Query 1 ICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDF 915 ICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTS IKQRELTVVLGTFGAGKSFL+KSFMKRSEGKFVTFVSPRRALANSIKRDLEMD+ECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMF+SRLPC+FKKGSMTAAFADYAIFHNMHDF Subject 3766 ICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSGIKQRELTVVLGTFGAGKSFLHKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAIFHNMHDF 4680
Range 2: 3768 to 4679 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
637.5 bits(1385) | 0.0 | 289/304(95%) | 0/304(0%) | Plus/Minus |
Query 2 KSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTNLRLSKLYLYDFPSSNLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHXXXXXXXXXXEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSALSKLGKYVIFDPFRESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQ 913 KSCILWK+A*SAKAAV++PFLK G+L+SNIGFTNLRLSKLYLYDFPSS+LNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLR+TRRHRSM*PGGNS TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHSSSISRSLLIEFARARLGETNVTNFPSDLFMKLL RKLFPAPNVPSTTVNSLCLM EVDTPASQGFESLNFSSLITPVKPPSKHP*SFSA SKLGKYVIFDPF+ESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMS RADMRPPGLITSISPLTSHLAQ Subject 3768 KSCILWKMA*SAKAAVMDPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSSLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRMTRRHRSM*PGGNSWTSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHSSSISRSLLIEFARARLGETNVTNFPSDLFMKLLCRKLFPAPNVPSTTVNSLCLMPEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSARSKLGKYVIFDPFKESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSKRADMRPPGLITSISPLTSHLAQ 4679
Range 3: 3766 to 4254 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
343.3 bits(743) | 0.0 | 147/163(90%) | 0/163(0%) | Plus/Minus |
Query 427 IHF*VPFD*IC*SSPR*DECYKFSFRSLHEALV*ETLSSPKCAKHNCQFSLFDVRS*HSSKPRL*IVKFLITYHASQTPQQAPLKFFRPLKTWKICYL*PVQRKQVKG*SFNFSQLIHLYTLRPVTNLFDMPNVFICYVKQSRYAPARINNLNFAIDITFGTD 915 IHF VPFD*IC*S PR*D+CYKFSFRSLHEALV*ETLSSPKCAKH+CQFSLFD RS HSSKPRL*IVKFLITYHAS T QQAPLKFFRPLKTWKICYL*PVQRKQVK *SFNFSQLIHLYTLRPVTNLFDMPNVFI YVK+SRYAPA I+N NF IDITF TD Subject 3766 IHFQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCAKHDCQFSLFDARSRHSSKPRL*IVKFLITYHAS*TSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPVTNLFDMPNVFIRYVKKSRYAPAWIDNFNFTIDITFSTD 4254
Range 4: 4300 to 4680 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
242.5 bits(523) | 0.0 | 108/127(85%) | 0/127(0%) | Plus/Minus |
Query 1 EVMHIVEDCIISKGCSH*TFFEVTWQSRFKHRIYKPPALQVVPI*LSFEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*IDVTRRE*LNFIKDHAMTSL*ACNFPKEDFKGNDIP 381 E+MHIVE+ +ISKG SH FEVT S KH IY+PPALQVVPI*L FEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTAN+KKT*IDVTR E*L+FIKDHAMTSL*ACNFPK+DFKGNDIP Subject 4300 EIMHIVENGVISKGGSHGPLFEVTG*S*IKHWIYEPPALQVVPI*LPFEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANDKKT*IDVTRGE*LDFIKDHAMTSL*ACNFPKKDFKGNDIP 4680
Range 5: 3767 to 4264 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
322.3 bits(697) | 0.0 | 148/166(89%) | 0/166(0%) | Minus/Plus |
Query 417 SVPNVMSMAKLRLLIRAGAYLLCLT*QMNTLGMSKRLVTGLKV*RWMSCEKLNDQPLTCFL*TGQR*HIFQVLRGRKNFRGACWGV*LA**VMRNLTIQSLGLLECQLLTSNKEN*QLCLAHLGLERVSYTRAS*RDLKENL*HSSHLGEL*QIQSKGT*KWMKNV 914 SV NVMSM KL+L I+AGAYLL LT*+MNTLGMSKRLVTGLKV*RWMSCEKLNDQ LTCFL*TGQR*HIFQVL GRKNFRGACW V*LA**VMRNLTIQSLGLLEC LL SNKEN*Q CLAHLGLERVSYTRAS*RDLKENL*H SHLG L*QIQSKGT KWM +V Subject 3767 SVLNVMSMVKLKLSIQAGAYLLFLT*RMNTLGMSKRLVTGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLSGRKNFRGACWEV*LA**VMRNLTIQSLGLLECLLLASNKEN*QSCLAHLGLERVSYTRAS*RDLKENL*HLSHLGGL*QIQSKGTWKWMMSV 4264
Range 6: 4281 to 4676 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
244.8 bits(528) | 0.0 | 111/132(84%) | 0/132(0%) | Minus/Plus |
Query 5 QIKEGGLGCRYL*SLP*ESYRPKGWSLRDL**SSAIPSWLHRSMSSCYSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEVARRKVI*VQLGEPEVCKSDV*I*TAMSLQKRFNDCSLC*LCNLPQYA* 400 QIKEGGLGCRYL*SL *ESYRPKGWSLRDL**S AIP WLHRSMSSC+SQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIE ARR+VI*VQLGEPEV KS+V* + LQK +DC LC*L + PQYA* Subject 4281 QIKEGGLGCRYL*SLS*ESYRPKGWSLRDL**SPAIPPWLHRSMSSCHSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEAARREVI*VQLGEPEVRKSNV*FKITL*LQKGVHDCRLC*LRHFPQYA* 4676
Range 7: 3767 to 4255 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
317.2 bits(686) | 0.0 | 146/163(90%) | 0/163(0%) | Plus/Minus |
Query 426 HPFLGPF*LNLLELA*VRRMLQIFLQIXXXXXCIGNSFQPQMCQAQLSILFV*CQKLTLQQAKALNR*ISHHLSRQSNPPASTPEVFPPSQNLENMLSLTRSEKAGQGLIV*LFAAHPPLYFEARYQSFRHA*CVHLLCQTEQICARPD**PQFRH*HHIWHR 914 HPF GPF*LNLLE A*VR+MLQIFLQISS*SSC+GNSFQPQMCQA+LSILFV*CQK TLQQAKALNR*ISHHLSRQ N PASTPEVFPP+QNLENMLSLTRS+KAGQ LIV*LFAAHPPLYFEARYQSFRHA*CVH LCQ EQICAR D** QF H*HHI HR Subject 3767 HPFPGPF*LNLLEPA*VRQMLQIFLQISS*SSCVGNSFQPQMCQARLSILFV*CQK*TLQQAKALNR*ISHHLSRQLNLPASTPEVFPPAQNLENMLSLTRSKKAGQELIV*LFAAHPPLYFEARYQSFRHA*CVHSLCQKEQICARLD**LQFHH*HHI*HR 4255
Range 8: 4349 to 4678 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
216.4 bits(466) | 0.0 | 90/110(82%) | 0/110(0%) | Plus/Minus |
Query 3 SHAYCGRLHNQQRLQSLNLF*SDMAV*IQTSDLQTSGSPSCTYMTFLRATSICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQEGIAELHQRSRNDQP 332 +HAYCG+ NQQR QS F*S + QT DL+TSGSPSCTYMT LRA SICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQ GIA LHQRSRNDQP Subject 4349 NHAYCGKWRNQQRRQSWTPF*SYRVILNQTLDLRTSGSPSCTYMTSLRAASICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQGGIAGLHQRSRNDQP 4678
Range 9: 3768 to 4238 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
314.5 bits(680) | 0.0 | 139/157(89%) | 0/157(0%) | Minus/Plus |
Query 443 LCQM*CQWRN*GY*SGRAHICSV*HNK*TH*ACRKDW*RASKYKGG*AAKS*TISP*PAFSERVKDNIFSKF*EGGKTSGVLAGGFDWRDK**EI*RFKALACWSVNF*HQTKRIDSCAWHIWGWKEFPIQELHEEI*RKICNIRLT*ASSSKFNQK 913 LC M*CQW N* Y S RAHICS *HN+*TH*ACRKDW*RASKYKGG*AAKS*TIS *PAF ERVKDNIFSKF* GGKTSGVLAG F+WRDK**EI*RFKALACWSV F HQTKRIDS AWHIWGWKEFP QELHEEI*RKICNI LT*A SSKFNQK Subject 3768 LC*M*CQW*N*SYQSRRAHICSF*HNE*TH*ACRKDW*RASKYKGG*AAKS*TISS*PAFFERVKDNIFSKF*AGGKTSGVLAGRFNWRDK**EI*RFKALACWSVYFWHQTKRIDSRAWHIWGWKEFPTQELHEEI*RKICNICLT*AGSSKFNQK 4238
Range 10: 4466 to 4675 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
125.7 bits(268) | 0.0 | 56/70(80%) | 0/70(0%) | Minus/Plus |
Query 6 KAHMILKKIELFWVLNRVTY*GCSKESHIGTTWRAGGL*IRCLNLDCHVTSKKVQ*LQPLLIMQSSTICM 215 KAHMILKKIELFWVLNRVTY*GCSK SHIGTTWRAGG *I+CL D VTSK+ *L PLLI STICM Subject 4466 KAHMILKKIELFWVLNRVTY*GCSKGSHIGTTWRAGGS*IQCLIQDYPVTSKRGP*LPPLLITPFSTICM 4675
Grapevine rupestris stem pitting associated virus isolate Tannat Rspav1, complete genome
Sequence ID: KR528585.1 Length: 8595 Number of Matches: 10
Range 1: 3748 to 4662 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
713.1 bits(1550) | 0.0 | 298/305(98%) | 0/305(0%) | Minus/Plus |
Query 1 ICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDF 915 ICAKCD+NGEIEVINP G+ISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDS+PWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDE CKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMF+SRLPC+FKKGSMTAAFADYAIFHNMHDF Subject 3748 ICAKCDINGEIEVINPRGKISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSRPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEGCKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAIFHNMHDF 4662
Range 2: 3750 to 4661 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
620.1 bits(1347) | 0.0 | 283/304(93%) | 0/304(0%) | Plus/Minus |
Query 2 KSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTNLRLSKLYLYDFPSSNLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHXXXXXXXXXXEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSALSKLGKYVIFDPFRESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQ 913 KSCIL K+A*SAKAAV+EPFLK GSL+SNIGFTNLRLSKLYLYDFPSS+LNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLH SSISRSLLIEFA+ARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQG ESLNFSSLITPV+PPSKHP*SFSA SKLGKYVIFDPF+ESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCS VMSN A++ P GLITSISP SHLAQ Subject 3750 KSCIL*KMA*SAKAAVMEPFLKLQGSLESNIGFTNLRLSKLYLYDFPSSSLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHPSSISRSLLIEFAKARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGLESLNFSSLITPVRPPSKHP*SFSARSKLGKYVIFDPFKESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSLVMSNNAEILPRGLITSISPFISHLAQ 4661
Range 3: 3748 to 4236 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
300.7 bits(650) | 0.0 | 129/163(79%) | 0/163(0%) | Plus/Minus |
Query 427 IHF*VPFD*IC*SSPR*DECYKFSFRSLHEALV*ETLSSPKCAKHNCQFSLFDVRS*HSSKPRL*IVKFLITYHASQTPQQAPLKFFRPLKTWKICYL*PVQRKQVKG*SFNFSQLIHLYTLRPVTNLFDMPNVFICYVKQSRYAPARINNLNFAIDITFGTD 915 IH VPFD*IC*S PR*D+CYKFSFRSLHEALV*ETLSSPKC K+NCQFSLF+V S*HSSKPR *I+KFL+ YH S T QQAPLKFFRPLKTWKICYL*PVQRKQVK *SFNFSQLIH YTLRP+TNLFDMP V I YVKQ R RIN+ N +I ITF + Subject 3748 IHLQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCTKYNCQFSLFNVGS*HSSKPRP*IIKFLVAYHTS*TSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHFYTLRPITNLFDMPYVLISYVKQCRNFTTRINHFNLSIYITFSAN 4236
Range 4: 4282 to 4662 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
240.7 bits(519) | 0.0 | 106/127(83%) | 0/127(0%) | Plus/Minus |
Query 1 EVMHIVEDCIISKGCSH*TFFEVTWQSRFKHRIYKPPALQVVPI*LSFEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*IDVTRRE*LNFIKDHAMTSL*ACNFPKEDFKGNDIP 381 ++MHIV++ +ISK SH FFEVT S KHRIY+PPALQVVPI*L FEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*IDVTR E*LNFIKDHAMTSL*ACNFPK++FKG++IP Subject 4282 KIMHIVKNGVISKSGSHGAFFEVTG*S*IKHRIYEPPALQVVPI*LPFEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*IDVTRGE*LNFIKDHAMTSL*ACNFPKKNFKGDNIP 4662
Range 5: 3759 to 4220 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
261.8 bits(565) | 0.0 | 121/154(79%) | 0/154(0%) | Minus/Plus |
Query 443 M*CQWRN*GY*SGRAHICSV*HNK*TH*ACRKDW*RASKYKGG*AAKS*TISP*PAFSERVKDNIFSKF*EGGKTSGVLAGGFDWRDK**EI*RFKALACWSVNF*HQTKRIDSCAWHIWGWKEFPIQELHEEI*RKICNIRLT*ASSSKFNQK 904 M* +WR+* *S + C V*HN * H ACRKDW* ASKYK G*AAKS*TIS *PAF ERVKDNIFSKF* GGKTSGVLAG +W DK EI* FKALACWSVNF H TKRIDSC W+IWGWKEFPIQELHEEI*RKICNI LT*A SKFNQK Subject 3759 M*YKWRD*SD*SAW*NFCIV*HN**AHKACRKDW*WASKYKSG*AAKS*TISS*PAFFERVKDNIFSKF*AGGKTSGVLAGRSNWCDKRREI**FKALACWSVNFRH*TKRIDSCTWYIWGWKEFPIQELHEEI*RKICNICLT*AGFSKFNQK 4220
Range 6: 4263 to 4658 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
244.8 bits(528) | 0.0 | 111/132(84%) | 0/132(0%) | Minus/Plus |
Query 5 QIKEGGLGCRYL*SLP*ESYRPKGWSLRDL**SSAIPSWLHRSMSSCYSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEVARRKVI*VQLGEPEVCKSDV*I*TAMSLQKRFNDCSLC*LCNLPQYA* 400 QIKEGGLGC +L*S *ESYRPKGWSLRDL**SSAIP WLHRSMSSCYSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIE ARR+VI*VQLGEPEV KSDV* T + LQKR +DC C*L + QYA* Subject 4263 QIKEGGLGCCHL*SFS*ESYRPKGWSLRDL**SSAIPPWLHRSMSSCYSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEAARREVI*VQLGEPEVRKSDV*FKTTL*LQKRLHDCRFC*LRHFSQYA* 4658
Range 7: 3758 to 4237 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
254.0 bits(548) | 0.0 | 125/160(78%) | 0/160(0%) | Plus/Minus |
Query 426 HPFLGPF*LNLLELA*VRRMLQIFLQIXXXXXCIGNSFQPQMCQAQLSILFV*CQKLTLQQAKALNR*ISHHLSRQSNPPASTPEVFPPSQNLENMLSLTRSEKAGQGLIV*LFAAHPPLYFEARYQSFRHA*CVHLLCQTEQICARPD**PQFRH*HHI 905 HP GPF*LNLL+ A*VR+MLQIFLQISS*SSCIGNSFQPQM Q QLSILFV*C+KLTLQQAKALN *IS LS Q + PASTPEVFPP+QNLENMLSLTRS+KAGQ LIV*LFAAHP LYFEA YQSFRHA C H LCQT Q D* Q H +HI Subject 3758 HPSPGPF*LNLLKPA*VRQMLQIFLQISS*SSCIGNSFQPQMYQVQLSILFV*CRKLTLQQAKALNH*ISRRLSHQLDLPASTPEVFPPAQNLENMLSLTRSKKAGQELIV*LFAAHPLLYFEAHYQSFRHALCAH*LCQTMQKFYHAD*SLQSLHLYHI 4237
Range 8: 4331 to 4660 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
221.5 bits(477) | 0.0 | 92/110(84%) | 0/110(0%) | Plus/Minus |
Query 3 SHAYCGRLHNQQRLQSLNLF*SDMAV*IQTSDLQTSGSPSCTYMTFLRATSICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQEGIAELHQRSRNDQP 332 +HAYC + NQQ+ QS +LF*S V QTSDL+TSGSPSCTYMT LRA SICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQ GIAELHQRSRNDQP Subject 4331 NHAYCEKWRNQQKRQSWSLF*SYRVVLNQTSDLRTSGSPSCTYMTSLRAASICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQGGIAELHQRSRNDQP 4660
Range 9: 3758 to 4393 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
332.4 bits(719) | 0.0 | 173/212(82%) | 0/212(0%) | Minus/Plus |
Query 270 NVMSMAKLRLLIRAGAYLLCLT*QMNTLGMSKRLVTGLKV*RWMSCEKLNDQPLTCFL*TGQR*HIFQVLRGRKNFRGACWGV*LA**VMRNLTIQSLGLLECQLLTSNKEN*QLCLAHLGLERVSYTRAS*RDLKENL*HSSHLGEL*QIQSKGT*KWMKNVXXXXXXXXXXXAGMSLPLKSSLGKLQA*RLVIA*SLMKFSYSLLVTSIY 905 NV+ M +L+ LIR +L CLT* M+T GMSKRLV GLKV*+WMSCEKLNDQ LTCFL*TGQR*HIFQVL GRKNFRGACW V*L ** RNL IQ LGLLECQL T NKEN*QL L HLGLERVSYTRAS*RDLKENL*H SHLG L*QIQSKGT +WM+ VRW*RQANQRRRAGM PLK LGKLQA*RLVIA*SLMKFSYS LVTSIY Subject 3758 NVI*MERLK*LIRVVKFLHCLT*LMST*GMSKRLVMGLKV*KWMSCEKLNDQLLTCFL*TGQR*HIFQVLSGRKNFRGACWEV*LV**ATRNLMIQGLGLLECQLPTLNKEN*QLYLVHLGLERVSYTRAS*RDLKENL*HLSHLGGL*QIQSKGTWRWMRGVRW*RQANQRRRAGMLSPLKFFLGKLQA*RLVIA*SLMKFSYSPLVTSIY 4393
Range 10: 4448 to 4657 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.0 bits(262) | 0.0 | 56/70(80%) | 0/70(0%) | Minus/Plus |
Query 6 KAHMILKKIELFWVLNRVTY*GCSKESHIGTTWRAGGL*IRCLNLDCHVTSKKVQ*LQPLLIMQSSTICM 215 KAHMILKKIELFWVLNRVTY*GCSK SHIGTTWRAGG *IRCL D VTSKK *L LLI TICM Subject 4448 KAHMILKKIELFWVLNRVTY*GCSKGSHIGTTWRAGGS*IRCLIQDYPVTSKKAP*LPLLLITPFFTICM 4657
Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome
Sequence ID: KR054734.1 Length: 8753 Number of Matches: 11
Range 1: 3766 to 4680 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
707.2 bits(1537) | 0.0 | 291/305(95%) | 0/305(0%) | Minus/Plus |
Query 1 ICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDF 915 ICAKCD+NGEIEVINPGGR+SALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLS+NGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWL+G+STSDIK RELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMD+ CKV KAGKSKKEGWDVVTFEVFLRK+ LKAGHCVIFDEVQLFPPGYIDLCLL IRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYN+ESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDF Subject 3766 ICAKCDINGEIEVINPGGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSDIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKIANLKAGHCVIFDEVQLFPPGYIDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDF 4680
Range 2: 3768 to 4679 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
545.4 bits(1184) | 0.0 | 254/304(84%) | 0/304(0%) | Plus/Minus |
Query 2 KSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTNLRLSKLYLYDFPSSNLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHXXXXXXXXXXEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSALSKLGKYVIFDPFRESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQ 913 KSC+LWKIA*SA AAV+EPFLK*HGSLDSNIGFTNLRLS LYL D PSSNLN+SLCSAP IA SF ESYVL*QGSPAREMKASLR+ R RS+*PGGNS*TSSK+TQ PAFR FLR TSKVTTSQPSFFDLPAF TL SSIS+SLLIEFARA LGET VTN PSDLF+KLLYRKL PAP VPSTTVNS L+SEVD P S G ESLNFSSLITPVKPPSKHP SFSALSKLGK VIFDPF E RSRADR TF SSSTF+L GPLPIFSTCL+CS VMSNRADMRPPGL+TSISPL SHLAQ Subject 3768 KSCMLWKIA*SANAAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVL*QGSPAREMKASLRMVNRQRSI*PGGNS*TSSKMTQWPAFRFAIFLRNTSKVTTSQPSFFDLPAFATLQLSSISKSLLIEFARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLISEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTFLSSSTFMLCGPLPIFSTCLICSLVMSNRADMRPPGLMTSISPLISHLAQ 4679
Range 3: 3766 to 4254 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
202.7 bits(436) | 0.0 | 92/163(56%) | 0/163(0%) | Plus/Minus |
Query 427 IHF*VPFD*IC*SSPR*DECYKFSFRSLHEALV*ETLSSPKCAKHNCQFSLFDVRS*HSSKPRL*IVKFLITYHASQTPQQAPLKFFRPLKTWKICYL*PVQRKQVKG*SFNFSQLIHLYTLRPVTNLFDMPNVFICYVKQSRYAPARINNLNFAIDITFGTD 915 IHF V F+*IC*S *++ Y+F+FR LH+ALV + +S K AKH+CQ S FD+RS*+S +P L IVK LITYH S P Q PL+ F P KTWK+ YL* + K+VK SF+FSQLIHLY LR V NL +M N+ + YVK S +APAR+++LN IDIT + Subject 3766 IHFQVSFN*IC*SPSG*NKGYEFAFRPLHKALVQKAFTSSKGAKHDCQLSRFDIRS*YS*EPWLGIVKLLITYHTS*AP*QTPLQLFSPFKTWKVSYL*SIH*KEVKSRSFHFSQLIHLYALRAVANLLNMSNMLVGYVK*S*HAPARVDDLNLPIDITLSAN 4254
Range 4: 4300 to 4680 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
170.1 bits(365) | 0.0 | 71/127(56%) | 0/127(0%) | Plus/Minus |
Query 1 EVMHIVEDCIISKGCSH*TFFEVTWQSRFKHRIYKPPALQVVPI*LSFEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*IDVTRRE*LNFIKDHAMTSL*ACNFPKEDFKGNDIP 381 EVMH+VEDCIISK CSH E+TWQS KH I+KPP L VVP+ L+ + QY+TL S+Q +I L +ICALT ITSKR+ES+T+ +T +++ RE LN IK+ AM L CNFPK+ FKG+++P Subject 4300 EVMHVVEDCIISKCCSHGALLEMTWQSGLKHWIHKPPTLNVVPVGLTLK*SQYITLLSSQYCAILLGVICALTGITSKRNESITSYG*QTKVNIAWREQLNLIKNDAMACLQVCNFPKKHFKGHNVP 4680
Range 5: 3786 to 4238 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
186.2 bits(400) | 0.0 | 81/151(54%) | 0/151(0%) | Minus/Plus |
Query 443 QWRN*GY*SGRAHICSV*HNK*TH*ACRKDW*RASKYKGG*AAKS*TISP*PAFSERVKDNIFSKF*EGGKTSGVLAGGFDWRDK**EI*RFKALACWSVNF*HQTKRIDSCAWHIWGWKEFPIQELHEEI*RKICNIRLT*ASSSKFNQK 895 QW +*G+ RAH+ S+*HN+ +* C +DW R +++KGG*A KS TI *P F+E +KDN+ SKF*+G K +GV A G +W DK**E+*RF+A+A ++NF*+Q R+DS AWH+W W + +QEL+EE+*R+I N+ T SSKFN K Subject 3786 QWGD*GHQPWRAHVSSI*HNQRAY*TC*EDWQRPAEHKGG*AEKSETICS*PPFNEWIKDNLLSKF*KG*KAAGVFARGLNWCDK**EV*RFQAMALRNINF*YQISRVDSRAWHLWSW*KLSVQELYEEV*RQIRNLCFTQKGSSKFN*K 4238
Range 6: 4281 to 4679 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
131.7 bits(281) | 0.0 | 71/133(53%) | 0/133(0%) | Minus/Plus |
Query 2 QIKEGGLGCRYL*SLP*ESYRPKGWSLRDL**SSAIPSWLHRSMSSCYSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEVARRKVI*VQLGEPEVCKSDV*I*TAMSLQKRFNDCSLC*LCNLPQYA*L 400 QIK+ LG L*S+ *E+ +P+G LR ** S +PS L+ +S +++* FH SCW*SLSKHI* K G * E*+IE+ V+ VQ E EVC+S+V*+ TAMS Q+ +DCS+C*LCNLPQ+A*L Subject 4281 QIKKRRLGRCDL*SVS*ENCKPEGRPLRHF**GSTVPSRLY*PLSVNHTK*CFHFSCW*SLSKHI*LPKGSRNTGS*AE*YIEIT*G*VLQVQH*ESEVCESNV*VQTAMSFQEGLHDCSIC*LCNLPQHA*L 4679
Range 7: 3779 to 4255 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
161.4 bits(346) | 0.0 | 89/159(56%) | 0/159(0%) | Plus/Minus |
Query 426 HPFLGPF*LNLLELA*VRRMLQIFLQIXXXXXCIGNSFQPQMCQAQLSILFV*CQKLTLQQAKALNR*ISHHLSRQSNPPASTPEVFPPSQNLENMLSLTRSEKAGQGLIV*LFAAHPPLYFEARYQSFRHA*CVHLLCQTEQICARPD**PQFRH*HH 902 HPF F*LNLLE V++ L+I LQ SS*SSC + +Q Q CQA+LS L +* QKL +A A NR* SHHLS Q +P A+TP F P QNLE+ LSL S K GQ IV LF+AHPPL R QS +H * LCQ E CAR **PQ H*+H Subject 3779 HPFPSLF*LNLLEPFWVKQRLRICLQTSS*SSCTESFYQLQRCQARLSTLEI*YQKLIFLRAMAWNR*TSHHLSHQLSPLANTPAAFQPFQNLESKLSLIHSLKGGQEQIVSLFSAHPPLCSAGRCQSSQHV*YARWLCQIELTCARQG**PQSPH*YH 4255
Range 8: 4349 to 4678 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
118.8 bits(253) | 0.0 | 58/110(53%) | 0/110(0%) | Plus/Minus |
Query 3 SHAYCGRLHNQQRLQSLNLF*SDMAV*IQTSDLQTSGSPSCTYMTFLRATSICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQEGIAELHQRSRNDQP 332 SHA CGRLHNQQ LQS + *+DMAV QT D QTS S CT T+ + SI HS Q P F +HMCFD+DHQQE+*K H D + + EG E HQ+ RN P Subject 4349 SHACCGRLHNQQMLQSWSPS*NDMAVWTQTLDSQTSDSQCCTCRTYPQVISIYHSAQLPVLRDPFGSHMCFDRDHQQEK*KHHFVWLTDKGQYSLEGTVEPHQK*RNGLP 4678
Range 9: 3776 to 4255 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
149.1 bits(319) | 0.0 | 89/160(56%) | 0/160(0%) | Minus/Plus |
Query 426 NVMSMAKLRLLIRAGAYLLCLT*QMNTLGMSKRLVTGLKV*RWMSCEKLNDQPLTCFL*TGQR*HIFQVLRGRKNFRGACWGV*LA**VMRNLTIQSLGLLECQLLTSNKEN*QLCLAHLGLERVSYTRAS*RDLKENL*HSSHLGEL*QIQSKGT*KWM 905 +V+SM +LR AGA L LT* + L M +RL T + *RWMS EK ND LT F * QR* FQVL+G K+ RG C G *L **VMR+LTI S G E QLL SN E+*Q CLA L L + TRA *R LK N * H L*QIQ K T KWM Subject 3776 SVISMGRLRSSTLAGACQLYLT*PTSILDMLRRLATARRA*RWMS*EK*NDLLLTSFQ*MDQR*LTFQVLKGLKSCRGVC*GA*LV**VMRSLTIPSHGSQEYQLLISNLES*QSCLAPLELVKAFCTRAL*RGLKANS*PLFHPEGL*QIQLKETWKWM 4255
Range 10: 4466 to 4678 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
95.0 bits(201) | 0.0 | 43/71(61%) | 0/71(0%) | Minus/Plus |
Query 3 KAHMILKKIELFWVLNRVTY*GCSKESHIGTTWRAGGL*IRCLNLDCHVTSKKVQ*LQPLLIMQSSTICMT 215 KAHM K+I +W L+RV Y* + S GTT R GGL*I+CL+ DCHV S++ *LQ LLIMQSST CMT Subject 4466 KAHMTPKRIAQYWELSRVIY*DYLRVSPTGTTLRVGGL*IQCLSPDCHVISRRAP*LQHLLIMQSSTTCMT 4678
Grapevine rupestris stem pitting associated virus isolate VF1, partial genome
Sequence ID: KT948710.1 Length: 8716 Number of Matches: 12
Range 1: 3767 to 4681 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
698.9 bits(1519) | 0.0 | 287/305(94%) | 0/305(0%) | Minus/Plus |
Query 1 ICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDF 915 ICAKCD+NGEIEVINP GR+SALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLS+NGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWL+G+STS+IK RELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMD+ CKV KAGKSK+EGWDVVTFEVFLRK+ LKAGHCVIFDEVQLFPPGY+DLCLL IRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYN+ESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDF Subject 3767 ICAKCDINGEIEVINPSGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDF 4681
Range 2: 3769 to 4680 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
523.9 bits(1137) | 0.0 | 251/304(83%) | 0/304(0%) | Plus/Minus |
Query 2 KSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTNLRLSKLYLYDFPSSNLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHXXXXXXXXXXEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSALSKLGKYVIFDPFRESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQ 913 KSCIL K+A*SAKAAV+EPFLK*HGSLDSNIGFTNLRLS LYL D PSSNLN+SLCSAP IA SF ESYVL QGSPA EMKASLR+ R RS *PGGNS*TSSKITQ PAFR FLR TSKVTTSQPS FDLPAF TL SSISRSLLIE ARA LGET VTN PSDLF+KLLYRKL PAP VPSTTVNS L+ EVD P S G ESLNFSSLITPVKPPSKHP SFSALSKLGK VIFDPF E RSRADR TF SSSTF+L GPLPIFSTCL+CS VMSNRADMRP GLITSISPL SHLAQ Subject 3769 KSCIL*KMA*SAKAAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVLWQGSPASEMKASLRMVNRQRST*PGGNS*TSSKITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRSLLIELARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTFLSSSTFMLCGPLPIFSTCLICSLVMSNRADMRPLGLITSISPLMSHLAQ 4680
Range 3: 3767 to 4255 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
195.3 bits(420) | 0.0 | 87/163(53%) | 0/163(0%) | Plus/Minus |
Query 427 IHF*VPFD*IC*SSPR*DECYKFSFRSLHEALV*ETLSSPKCAKHNCQFSLFDVRS*HSSKPRL*IVKFLITYHASQTPQQAPLKFFRPLKTWKICYL*PVQRKQVKG*SFNFSQLIHLYTLRPVTNLFDMPNVFICYVKQSRYAPARINNLNFAIDITFGTD 915 IHF + F+*I *S P *++ Y+F+FR LH+AL+ +TL+S K KH+CQF FD+ S*+ KP L I+KF +TYHAS Q L+ F P K WK+ YL + R++VK S +FSQ IHLY LR VTNL +MP +FI YVKQS +A ARI+NLN I++T T+ Subject 3767 IHFQISFN*IS*SPPG*NKGYEFTFRPLHKALIQKTLASSKSPKHDCQFPRFDI*S*YP*KPWLGIIKFFVTYHAS*AS*QTSLQLFCPFKAWKVSYLRSIHREEVKSRSLHFSQFIHLYALRAVTNLLNMPYMFISYVKQS*HASARIDNLNLPINVTLSTN 4255
Range 4: 4301 to 4681 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
140.4 bits(300) | 0.0 | 60/127(47%) | 0/127(0%) | Plus/Minus |
Query 1 EVMHIVEDCIISKGCSH*TFFEVTWQSRFKHRIYKPPALQVVPI*LSFEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*IDVTRRE*LNFIKDHAMTSL*ACNFPKEDFKGNDIP 381 E+MHIV++ IIS+ CSH E+TWQS KH I+KPPAL VVP+ L+ + QY+TL ++ L +ICAL +TS+ +ESVT+ +T +++ R+ LN IKDH M L* N ++ FKG+D+P Subject 4301 EIMHIVKNGIISESCSHGALLEMTWQSGLKHWIHKPPALNVVPVGLALK*SQYITLLGP*YCAVLLGVICALAGVTSE*NESVTSYG*QTKVNIAWRKQLNLIKDHTMACL*ILNLSEKHFKGHDVP 4681
Range 5: 3769 to 4239 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
157.3 bits(337) | 0.0 | 78/157(50%) | 0/157(0%) | Minus/Plus |
Query 443 LCQM*CQWRN*GY*SGRAHICSV*HNK*TH*ACRKDW*RASKYKGG*AAKS*TISP*PAFSERVKDNIFSKF*EGGKTSGVLAGGFDWRDK**EI*RFKALACWSVNF*HQTKRIDSCAWHIWGWKEFPIQELHEEI*RKICNIRLT*ASSSKFNQK 913 LC +* W +*GY S R H+ SV*HN *T+ AC +DW*R +++KGG* KS I *P E ++DN+ SK *+G K +G+ A +WRDK* +I* F+A+A +NF +Q IDS AW W W+EF + EL+EE+*R I N+ T SS FN K Subject 3769 LC*V*H*WGD*GYQS*RTHVSSV*HN**TYKAC*EDW*RPAEHKGG*TEKSEAICS*PPLDEWIEDNLLSKL*KGRKAAGMFARRLNWRDK*RKI**FQAMAFRDINFKYQISGIDSRAWDFWSWQEFSV*ELYEEV*R*IRNLCFTQEGSS*FN*K 4239
Range 6: 4467 to 4676 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
71.6 bits(150) | 0.0 | 36/70(51%) | 0/70(0%) | Minus/Plus |
Query 6 KAHMILKKIELFWVLNRVTY*GCSKESHIGTTWRAGGL*IRCLNLDCHVTSKKVQ*LQPLLIMQSSTICM 215 KAHM K+ + ++V Y* + S GTT RAGGL*I+CL+ DCHV S++ *LQ LIM TICM Subject 4467 KAHMTPKRTAQY*GPSKVIY*DYLRASPTGTTLRAGGL*IQCLSPDCHVISRRAP*LQLSLIMPFFTICM 4676
Range 7: 4282 to 4488 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
57.0 bits(118) | 0.0 | 34/69(49%) | 0/69(0%) | Minus/Plus |
Query 194 QIKEGGLGCRYL*SLP*ESYRPKGWSLRDL**SSAIPSWLHRSMSSCYSQ*RFHLSCW*SLSKHI*FSK 400 Q+KE GLG R L*S+ + KG L DL** SA+ S L +S +++*RFH + W* L KHI* K Subject 4282 QVKERGLGRRDL*SVSQKD*ESKGRPLCDL**GSAVSSRLC*PLSVNHTK*RFHFTRW*PLPKHI*LPK 4488
Range 8: 3768 to 4256 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
139.0 bits(297) | 0.0 | 84/163(52%) | 0/163(0%) | Plus/Minus |
Query 426 HPFLGPF*LNLLELA*VRRMLQIFLQIXXXXXCIGNSFQPQMCQAQLSILFV*CQKLTLQQAKALNR*ISHHLSRQSNPPASTPEVFPPSQNLENMLSLTRSEKAGQGLIV*LFAAHPPLYFEARYQSFRHA*CVHLLCQTEQICARPD**PQFRH*HHIWHR 914 HPF F*LN LE + V++ L+I+LQ SS*SS NS Q Q QA+LSI +* KL +A A N *I HLSRQ + A+ P F P Q+LE+ LS S + GQ I LF+ HPPL RYQS +HA VH LCQTE C R D**PQ H* H H+ Subject 3768 HPFPDLF*LN*LEPSWVKQRLRIYLQTSS*SSYTENSCQLQKSQARLSIPEI*YLKLISLKAMAWNH*IFRHLSRQLSLLANIPAAFLPFQSLESKLSSIHSSRGGQEQIASLFSVHPPLCSAGRYQSSQHALYVH*LCQTELTCVR*D**PQSPH*CHT*HK 4256
Range 9: 4518 to 4679 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
62.9 bits(131) | 0.0 | 29/54(54%) | 0/54(0%) | Plus/Minus |
Query 3 SHAYCGRLHNQQRLQSLNLF*SDMAV*IQTSDLQTSGSPSCTYMTFLRATSICH 164 +HAYC + HNQ++LQS + *+DMAV QT D QTSGS CT T + SI H Subject 4518 NHAYCEKWHNQRKLQSWSPS*NDMAVWTQTLDSQTSGSQCCTCRTCPQVISIYH 4679
Range 10: 4350 to 4487 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
46.0 bits(94) | 0.0 | 21/46(46%) | 0/46(0%) | Plus/Minus |
Query 195 FENHMCFDKDHQQER*KRHCE*QEDIDRCNQEGIAELHQRSRNDQP 332 F +HMCF + HQ+ +*KRH D + + E AE HQRS N P Subject 4350 FGSHMCFGRGHQRVK*KRHFVWLTDKGQHSLEETAEPHQRSHNGLP 4487
Range 11: 3771 to 4385 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
147.2 bits(315) | 0.0 | 105/205(51%) | 0/205(0%) | Minus/Plus |
Query 297 VPNVMSMAKLRLLIRAGAYLLCLT*QMNTLGMSKRLVTGLKV*RWMSCEKLNDQPLTCFL*TGQR*HIFQVLRGRKNFRGACWGV*LA**VMRNLTIQSLGLLECQLLTSNKEN*QLCLAHLGLERVSYTRAS*RDLKENL*HSSHLGEL*QIQSKGT*KWMKNVXXXXXXXXXXXAGMSLPLKSSLGKLQA*RLVIA*SLMKFS 911 V +V M +LRL I A A LCLT* MN GM +RLVT + *RWM+ EK +D LT * +R* FQ L+G+K+ R C *LA**V +NL I S G QL SN N*Q CL L L RV RA *R LK N * H G L* IQ K KWM +W RQA+QR R G S PLK +L+ *R I *SLM+FS Subject 3771 VLSVTLMGRLRLSILADACQLCLT*LMNI*GMLRRLVTARRA*RWMN*EK*SDLLLTSSR*MDRR*LTFQALKGQKSCRDVC*EA*LA**VTKNLMIPSHGFQGYQLQISNLGN*QSCLGLLELARVFCIRAL*RGLKVNS*PLFHPGGL*LIQLKEIWKWMMAAKWQRQASQRERVGTS*PLKCFSERLRI*RQAIV*SLMRFS 4385
Range 12: 4516 to 4677 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
60.2 bits(125) | 0.0 | 29/54(54%) | 0/54(0%) | Minus/Plus |
Query 5 E*HIEVARRKVI*VQLGEPEVCKSDV*I*TAMSLQKRFNDCSLC*LCNLPQYA* 166 +*+IE+ +V+ VQ EPEVC+S+V*+ TAMS Q+ +DCS *LC+ QYA* Subject 4516 K*YIEIT*GQVLQVQH*EPEVCESNV*VQTAMSFQEGLHDCSFR*LCHFSQYA* 4677
Nucleotide Sequence (543 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
422.2 | 2390.3 | 41% | 2.643e-116 | 94% | KX274275.1 | |
362.6 | 2169.0 | 34% | 9.779e-104 | 84% | AY368590.1 | |
280.6 | 1463.4 | 33% | 1.776e-99 | 52% | KX958435.1 | |
280.6 | 1400.6 | 33% | 1.185e-98 | 50% | KR054734.1 | |
276.5 | 1455.6 | 30% | 8.634e-99 | 53% | KR528585.1 |
Alignments
Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome
Sequence ID: KX274275.1 Length: 8724 Number of Matches: 8
Range 1: 5006 to 5542 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
422.2 bits(915) | 0.0 | 171/179(96%) | 0/179(0%) | Minus/Minus |
Query 6 CGWHSVEPLKGKCQVKTSHMALRALILQLRLEALKISDVS*RP*ERSLNHYLYVLDICFQIFHMHCSIARFFHTCVHQRTVGSFHNHISLHGVPSTPSFQPTWPWLIPSYLMGYGF*TIPHLSIQTQVPQLRNPHLGQGKA*PLAKDHHTASPLSPLHSAQC*H*NH*RSWAHLEANPL 542 CG HSVEPLKGKCQVKTSHMALRALILQLRLEALKI DVS*+P*ERSLNHYLYVLDICFQIFHMHCSIARFFHTCVHQRTVGSFHNHISLHGVPSTPSFQPTWPW IPSYLMGYGF*TIPHL+IQTQ PQLRNPHLGQGKA*PLAKDHHTASPLSPLHSAQC*H*NH*RSWAH EA+PL Subject 5006 CGLHSVEPLKGKCQVKTSHMALRALILQLRLEALKI*DVS*QP*ERSLNHYLYVLDICFQIFHMHCSIARFFHTCVHQRTVGSFHNHISLHGVPSTPSFQPTWPWSIPSYLMGYGF*TIPHLNIQTQAPQLRNPHLGQGKA*PLAKDHHTASPLSPLHSAQC*H*NH*RSWAHREASPL 5542
Range 2: 5002 to 5541 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
402.9 bits(873) | 0.0 | 170/180(94%) | 0/180(0%) | Minus/Minus |
Query 2 VAGIQWNL*KESVK*KLPIWLCAP*FCSFDLRL*KFQTFPNGHEKGH*IITFMSWIYAFKSFTCIAQLLASSTPVFIKELLGRFITTSHFTVFLQRHLSNPPGPG*FQVT*WDMGFKPFLI*AFRLKFLNFAILILAKEKHDL*PRITTQLLLSHPFIPPNANIETIKEAGLTWKQIPYY 541 VA IQWNL*KESVK*KLPIWLCAP*FCSFDLRL*KF+TFPN HEKGH*IITFMSWIYAFKSFTCIAQLLASSTPVFIKELLGRFITTSHFTVFLQRHLSNPPGPG FQVT*WDMGFKPFLI* FRLK LNFAILILAKEKHDL*PRITTQLLLSHPFIPPNANIETIKE GLT KQ+PY+ Subject 5002 VACIQWNL*KESVK*KLPIWLCAP*FCSFDLRL*KFKTFPNSHEKGH*IITFMSWIYAFKSFTCIAQLLASSTPVFIKELLGRFITTSHFTVFLQRHLSNPPGPGRFQVT*WDMGFKPFLI*TFRLKLLNFAILILAKEKHDL*PRITTQLLLSHPFIPPNANIETIKEVGLTGKQVPYH 5541
Range 3: 5001 to 5543 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
392.4 bits(850) | 0.0 | 173/181(96%) | 0/181(0%) | Plus/Plus |
Query 1 CNKGFASR*AQLL*WFQC*HWAE*RGERGEAVW*SLAKGHAFPWPR*GLRS*GT*V*MLK*GMV*NPYPIK*LGINQGQVGWKDGVEGTP*SEMWL*NDPTVL**TQVWKKRAIEQCM*KI*KHISKT*R**FSDLSHGR*ETSEIFKASSRSCKIKARKAIWEVFT*HFPFKGSTECQPQ 543 C+KG ASR*AQLL*WFQC*HWAE*RGERGEAVW*SLAKGHAFPWPR*GLRS*G *V*M K*GMV*NPYPIK*LGI+QGQVGWKDGVEGTP*SEMWL*NDPTVL**TQVWKKRAIEQCM*KI*KHISKT*R**FSDLSHG *ETS IFKASSRSCKIKARKAIWEVFT*HFPFKGSTEC+PQ Subject 5001 CDKGLASR*AQLL*WFQC*HWAE*RGERGEAVW*SLAKGHAFPWPR*GLRS*GA*V*MFK*GMV*NPYPIK*LGIDQGQVGWKDGVEGTP*SEMWL*NDPTVL**TQVWKKRAIEQCM*KI*KHISKT*R**FSDLSHGC*ETS*IFKASSRSCKIKARKAIWEVFT*HFPFKGSTECKPQ 5543
Range 4: 5003 to 5542 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
385.0 bits(834) | 0.0 | 171/180(95%) | 0/180(0%) | Plus/Plus |
Query 3 **GICFQVSPASLMVSMLALGGMKG*ERRSCVVILG*RSCFSLAKMRIAKLRNLSLNAQMRNGLKPISH*VTWNQPGPGGLERWR*RNTVK*DVVMKRPNSSLMNTGVEEASN*AMHVKDLKAYIQDIKVMIQ*PFSWPLGNV*NFQSLKSKLQN*GAQSHMGSFYLTLSFQRFH*MPAT 542 **G CF VSP SLMVSMLALGGMKG*ERRSCVVILG*RSCFSLAKMRIAKLR+LSLN QMRNGLKPISH*VTWN+PGPGGLERWR*RNTVK*DVVMKRPNSSLMNTGVEEASN*AMHVKDLKAYIQDIKVMIQ*PFSW LGNV NFQSLKSKLQN*GAQSHMGSFYLTLSFQRFH*M AT Subject 5003 **GTCFPVSPTSLMVSMLALGGMKG*ERRSCVVILG*RSCFSLAKMRIAKLRSLSLNVQMRNGLKPISH*VTWNRPGPGGLERWR*RNTVK*DVVMKRPNSSLMNTGVEEASN*AMHVKDLKAYIQDIKVMIQ*PFSWLLGNVLNFQSLKSKLQN*GAQSHMGSFYLTLSFQRFH*MQAT 5542
Range 5: 5188 to 5541 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
291.1 bits(629) | 0.0 | 118/118(100%) | 0/118(0%) | Plus/Plus |
Query 188 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH 541 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH Subject 5188 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH 5541
Range 6: 5002 to 5136 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.4 bits(239) | 0.0 | 44/45(98%) | 0/45(0%) | Plus/Plus |
Query 2 VIRDLLPGEPSFFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQ 136 VIRDLLPGEP+FFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQ Subject 5002 VIRDLLPGEPNFFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQ 5136
Range 7: 5187 to 5543 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
288.4 bits(623) | 0.0 | 118/119(99%) | 0/119(0%) | Minus/Minus |
Query 187 LWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFENFRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSKLLNGIWVLNH 543 LWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFEN RRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSKLLNGIWVLNH Subject 5187 LWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFENLRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSKLLNGIWVLNH 5543
Rupestris stem pitting associated virus strain Syrah, complete genome
Sequence ID: AY368590.1 Length: 8742 Number of Matches: 8
Range 1: 5188 to 5541 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
289.3 bits(625) | 0.0 | 117/118(99%) | 0/118(0%) | Plus/Plus |
Query 188 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH 541 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSE+LSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH Subject 5188 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEKLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH 5541
Range 2: 5002 to 5136 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.4 bits(239) | 0.0 | 44/45(98%) | 0/45(0%) | Plus/Plus |
Query 2 VIRDLLPGEPSFFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQ 136 VIRDLLPGEP+FFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQ Subject 5002 VIRDLLPGEPNFFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQ 5136
Range 3: 5006 to 5542 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
362.6 bits(785) | 0.0 | 152/179(85%) | 0/179(0%) | Minus/Minus |
Query 6 CGWHSVEPLKGKCQVKTSHMALRALILQLRLEALKISDVS*RP*ERSLNHYLYVLDICFQIFHMHCSIARFFHTCVHQRTVGSFHNHISLHGVPSTPSFQPTWPWLIPSYLMGYGF*TIPHLSIQTQVPQLRNPHLGQGKA*PLAKDHHTASPLSPLHSAQC*H*NH*RSWAHLEANPL 542 CG HSV P KGKCQVK SHMALRA ILQL+LEA +I DVS*+P* RSLNHYLYVLDICFQIFHMHCSI+RFFHT VHQRTVGSFHNHISLHGVPS PSFQPTWP LIP YLMGYGF*TIPH SIQTQVPQ RNPHLG KA*PLAKDHH A PL+ LHSAQC* *+H*RSWAH EANPL Subject 5006 CGLHSVGPSKGKCQVKISHMALRASILQLQLEASRI*DVS*QP*GRSLNHYLYVLDICFQIFHMHCSISRFFHTYVHQRTVGSFHNHISLHGVPSMPSFQPTWPLLIPDYLMGYGF*TIPHSSIQTQVPQPRNPHLGLRKA*PLAKDHHKAFPLALLHSAQC*R*SH*RSWAHREANPL 5542
Range 4: 5002 to 5541 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
360.3 bits(780) | 0.0 | 152/180(84%) | 0/180(0%) | Minus/Minus |
Query 2 VAGIQWNL*KESVK*KLPIWLCAP*FCSFDLRL*KFQTFPNGHEKGH*IITFMSWIYAFKSFTCIAQLLASSTPVFIKELLGRFITTSHFTVFLQRHLSNPPGPG*FQVT*WDMGFKPFLI*AFRLKFLNFAILILAKEKHDL*PRITTQLLLSHPFIPPNANIETIKEAGLTWKQIPYY 541 VA IQW+L KESVK*K PIWLCAP FCSF+LRL +F+TFP+ HE+GH*IITFMSWIYAFKSFTCIAQ LASSTP+FIKELLGRFITTSHFTVFLQ HLSNPPGP *FQ+T*WDMGFKPFLI AFRLKFLN AILILA EKHDL*PRITT+L LSH FIPPNAN+E IKE GLT KQIPY+ Subject 5002 VACIQWDLRKESVK*KFPIWLCAPQFCSFNLRLREFKTFPDSHEEGH*IITFMSWIYAFKSFTCIAQFLASSTPMFIKELLGRFITTSHFTVFLQCHLSNPPGPC*FQIT*WDMGFKPFLIRAFRLKFLNLAILILA*EKHDL*PRITTKLFLSHSFIPPNANVEAIKEVGLTGKQIPYH 5541
Range 5: 5187 to 5543 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
281.9 bits(609) | 0.0 | 116/119(97%) | 0/119(0%) | Minus/Minus |
Query 187 LWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFENFRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSKLLNGIWVLNH 543 LWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFEN RRFLTAMRKVTESLPLCLGYMLSNLSHALLN SLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDS+LLNGIWVLNH Subject 5187 LWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFENLRRFLTAMRKVTESLPLCLGYMLSNLSHALLNFSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSRLLNGIWVLNH 5543
Range 6: 5001 to 5120 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
89.5 bits(189) | 0.0 | 38/40(95%) | 0/40(0%) | Minus/Minus |
Query 1 MTFSQGSPHSFSSLTPSFRPMLTLKPLKKLGSPGSKSLIT 120 MTFSQGSP SFSS TPSFRPMLTLKPLKKLGSPGSKSLIT Subject 5001 MTFSQGSPQSFSSRTPSFRPMLTLKPLKKLGSPGSKSLIT 5120
Range 7: 5001 to 5543 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
338.8 bits(733) | 0.0 | 153/181(85%) | 0/181(0%) | Plus/Plus |
Query 1 CNKGFASR*AQLL*WFQC*HWAE*RGERGEAVW*SLAKGHAFPWPR*GLRS*GT*V*MLK*GMV*NPYPIK*LGINQGQVGWKDGVEGTP*SEMWL*NDPTVL**TQVWKKRAIEQCM*KI*KHISKT*R**FSDLSHGR*ETSEIFKASSRSCKIKARKAIWEVFT*HFPFKGSTECQPQ 543 C+KGFASR*AQLL*W Q *HWAE*R RG+A+W*SLAKGHAF PR*GLR *GT*V*ML+*GMV*NPYPIK* GIN+GQVGWKDG+EGTP*SEMWL*NDPTVL**T VWKKR IEQCM*KI*KHISKT*R**FSDL HG ETS I +ASS SCKI+ARKAIWE+FT*HFPF+G TEC+PQ Subject 5001 CDKGFASR*AQLL*WLQR*HWAE*RSARGKALW*SLAKGHAFLRPR*GLRG*GT*V*MLE*GMV*NPYPIK*SGINKGQVGWKDGIEGTP*SEMWL*NDPTVL**T*VWKKREIEQCM*KI*KHISKT*R**FSDLPHGCQETS*ILEASS*SCKIEARKAIWEIFT*HFPFEGPTECKPQ 5543
Range 8: 5003 to 5542 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
334.2 bits(723) | 0.0 | 153/180(85%) | 0/180(0%) | Plus/Plus |
Query 3 **GICFQVSPASLMVSMLALGGMKG*ERRSCVVILG*RSCFSLAKMRIAKLRNLSLNAQMRNGLKPISH*VTWNQPGPGGLERWR*RNTVK*DVVMKRPNSSLMNTGVEEASN*AMHVKDLKAYIQDIKVMIQ*PFSWPLGNV*NFQSLKSKLQN*GAQSHMGSFYLTLSFQRFH*MPAT 542 **GICF VSP SLM S LALGGMK ER+S VVILG*RSCFS AKMRIA+LRNLSLNA+MRNGLKPISH*V WNQ GPGGLERW *RNTVK*DVVMKRPNSSLMN GVEEA N*AMHVKDLKAYIQDIKVMIQ*P SW GNV N +SLK KLQN*GAQSHMG+FYLTLSF+R H*M AT Subject 5003 **GICFPVSPTSLMASTLALGGMKECERKSFVVILG*RSCFS*AKMRIARLRNLSLNARMRNGLKPISH*VIWNQQGPGGLERWH*RNTVK*DVVMKRPNSSLMNIGVEEARN*AMHVKDLKAYIQDIKVMIQ*PSSWLSGNVLNSRSLKLKLQN*GAQSHMGNFYLTLSFRRSH*MQAT 5542
Grapevine rupestris stem pitting associated virus isolate CS BR, complete genome
Sequence ID: KX958435.1 Length: 8743 Number of Matches: 8
Range 1: 5189 to 5542 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
280.6 bits(606) | 0.0 | 114/118(97%) | 0/118(0%) | Plus/Plus |
Query 188 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH 541 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHR G EQLSNACERFESIYPRHKGNDS+TFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH Subject 5189 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH 5542
Range 2: 5003 to 5137 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.9 bits(227) | 0.0 | 40/45(89%) | 0/45(0%) | Plus/Plus |
Query 2 VIRDLLPGEPSFFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQ 136 VIRDLLPGEP+FFNGF+++IG+NEGVREEKLCGDPWLKVMLFLGQ Subject 5003 VIRDLLPGEPNFFNGFSINIGKNEGVREEKLCGDPWLKVMLFLGQ 5137
Range 3: 5188 to 5544 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
221.0 bits(476) | 0.0 | 95/119(80%) | 0/119(0%) | Minus/Minus |
Query 187 LWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFENFRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSKLLNGIWVLNH 543 LWLAF+GTF+RKVSS+NFP GFARL+FAAST GFENFRRF TA++KV ESLPLCLG MLS S ALLNCS +P LCSSKNC VVS PH TSRCSF AIFPTHLALVDSKLL G+ VLNH Subject 5188 LWLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFRRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPIPPLCSSKNC*VVSYPHRTSRCSFKAIFPTHLALVDSKLLKGMCVLNH 5544
Range 4: 5002 to 5121 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.9 bits(168) | 0.0 | 33/40(82%) | 0/40(0%) | Minus/Minus |
Query 1 MTFSQGSPHSFSSLTPSFRPMLTLKPLKKLGSPGSKSLIT 120 +TFS GSPHSFSS TPSF PML LKPLKK GSPGS+SLIT Subject 5002 ITFSHGSPHSFSSRTPSFLPMLMLKPLKKFGSPGSRSLIT 5121
Range 5: 5003 to 5542 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
206.8 bits(445) | 0.0 | 101/180(56%) | 0/180(0%) | Minus/Minus |
Query 2 VAGIQWNL*KESVK*KLPIWLCAP*FCSFDLRL*KFQTFPNGHEKGH*IITFMSWIYAFKSFTCIAQLLASSTPVFIKELLGRFITTSHFTVFLQRHLSNPPGPG*FQVT*WDMGFKPFLI*AFRLKFLNFAILILAKEKHDL*PRITTQLLLSHPFIPPNANIETIKEAGLTWKQIPYY 541 VA I W+ ESVK + PI LC P* SF L L*K Q F +GH KG+ +I +S I AFK+FT IA LLA S PVFI+ELL FI TS+ TV LQ H NP PG* Q+ + F+PF I* RLK NF +LILA EKH+ *PRITTQL LS+ FI + + ETI++ LTWK IPY+ Subject 5003 VASI*WDFR*ESVKQEFPIRLCTP*LRSFHLWL*KLQAFSDGH*KGNGVIALVSRINAFKTFTGIA*LLAHSPPVFIEELLSCFIPTSYLTVLLQGHFPNPSSPG*LQIAQGYVCFEPFFI*TLRLKLFNFTVLILA*EKHNF*PRITTQLFLSYTFILTDVDAETIEKVWLTWK*IPYH 5542
Range 6: 5007 to 5543 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
191.2 bits(411) | 0.0 | 97/179(54%) | 0/179(0%) | Minus/Minus |
Query 6 CGWHSVEPLKGKCQVKTSHMALRALILQLRLEALKISDVS*RP*ERSLNHYLYVLDICFQIFHMHCSIARFFHTCVHQRTVGSFHNHISLHGVPSTPSFQPTWPWLIPSYLMGYGF*TIPHLSIQTQVPQLRNPHLGQGKA*PLAKDHHTASPLSPLHSAQC*H*NH*RSWAHLEANPL 542 CG H + GKCQ SH AL AL QL ALK S V RP +R +H V D CFQ H HC IAR F CVH+R FH HI HG PS P QP PWL P+ F*TI HL+ QTQ QL +PH G KA* LA DHHTA PL LHS +C* *NH*+S AHLE +PL Subject 5007 CG*HLMGLSIGKCQAGISHKALHALASQLPPVALKTSGVFGRPLKR*WSHCPCV*DKCFQNVHRHCLIARPFPPCVHRRIAELFHTHIVPHGAPSRPFSQPI*PWLTPNCSRVCVF*TILHLNTQTQALQLHSPHPGLRKA*LLATDHHTAFPLVHLHSYRC*C*NH*KSLAHLEVDPL 5543
Range 7: 5004 to 5543 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
189.8 bits(408) | 0.0 | 99/180(55%) | 0/180(0%) | Plus/Plus |
Query 3 **GICFQVSPASLMVSMLALGGMKG*ERRSCVVILG*RSCFSLAKMRIAKLRNLSLNAQMRNGLKPISH*VTWNQPGPGGLERWR*RNTVK*DVVMKRPNSSLMNTGVEEASN*AMHVKDLKAYIQDIKVMIQ*PFSWPLGNV*NFQSLKSKLQN*GAQSHMGSFYLTLSFQRFH*MPAT 542 **GI FQVS MVS MK ER+SCVVI G*+ CFS A+MR KL++LSL+ QM+NG K * W+QPG GL +W *R+TV+ DV MK+ ++S MNTG E ASN*AM V LKA+I D + M PF WP N *+FQS + KL++*G QS MG+ LTLS+++ H*M AT Subject 5004 **GIYFQVSQTFSMVSASTSVRMKVYERKSCVVIRG*KLCFS*ARMRTVKLKSLSLSVQMKNGSKHTYP*AIWSQPGLDGLGKWP*RSTVRYDVGMKQLSNSSMNTGGEWASN*AMPVNVLKAFILDTRAMTPLPF*WPSENA*SFQSHRWKLRS*GVQSLMGNSCLTLSYRKSH*MLAT 5543
Range 8: 5002 to 5544 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
187.1 bits(402) | 0.0 | 94/181(52%) | 0/181(0%) | Plus/Plus |
Query 1 CNKGFASR*AQLL*WFQC*HWAE*RGERGEAVW*SLAKGHAFPWPR*GLRS*GT*V*MLK*GMV*NPYPIK*LGINQGQVGWKDGVEGTP*SEMWL*NDPTVL**TQVWKKRAIEQCM*KI*KHISKT*R**FSDLSHGR*ETSEIFKASSRSCKIKARKAIWEVFT*HFPFKGSTECQPQ 543 C+KG SR*A+L WFQ H E*R RG+AVW*S+AK +AF P *GL S* *V*+ K* MV N + ++ G+NQG +GW++G+EG P* MW+*N+ +L *TQ RAI+QC+* *KH+S T * L +GR +T E+FKA+ SC+ KA KA+WE+ *HFP + +C PQ Subject 5002 CDKGSTSR*AKLFQWFQHQHR*E*RCTRGKAVW*SVAKSYAFLRPG*GL*S*RA*V*VFK*RMVQNTHTLEQFGVNQG*MGWENGLEGAP*GTMWV*NNSAILR*TQGGNGRAIKQCL*TF*KHLS*TQGQ*LHYLFNGRPKTPEVFKATGGSCEAKACKALWEIPA*HFPIESPIKC*PQ 5544
Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome
Sequence ID: KR054734.1 Length: 8753 Number of Matches: 8
Range 1: 5188 to 5541 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
280.6 bits(606) | 0.0 | 114/118(97%) | 0/118(0%) | Plus/Plus |
Query 188 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH 541 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHR G EQLSNACERFESIYPRHKGNDS+TFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH Subject 5188 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH 5541
Range 2: 5002 to 5136 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
104.2 bits(221) | 0.0 | 39/45(87%) | 0/45(0%) | Plus/Plus |
Query 2 VIRDLLPGEPSFFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQ 136 VIRDLLPGEP F+NGF+++IG+NEGVREEKLCGDPWLKVMLFLGQ Subject 5002 VIRDLLPGEPIFYNGFSINIGKNEGVREEKLCGDPWLKVMLFLGQ 5136
Range 3: 5187 to 5543 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
216.4 bits(466) | 0.0 | 92/119(77%) | 0/119(0%) | Minus/Minus |
Query 187 LWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFENFRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSKLLNGIWVLNH 543 LWLAF+GTF++ VSS+NFP GFARL+FAAST GFENF+RF TA++KV ESLPLCLG MLSNLS ALLNCS +P LCSSKNC VVS P TSRCSF AIFPTHLALVDS+LL G+ VLNH Subject 5187 LWLAFNGTFDKNVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSNLSQALLNCSPIPPLCSSKNC*VVSYPQRTSRCSFKAIFPTHLALVDSRLLKGMCVLNH 5543
Range 4: 5001 to 5120 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
76.7 bits(161) | 0.0 | 32/40(80%) | 0/40(0%) | Minus/Minus |
Query 1 MTFSQGSPHSFSSLTPSFRPMLTLKPLKKLGSPGSKSLIT 120 +T S GSPHSFSSLTPSF PML LKPL K+GSPGS+SLIT Subject 5001 ITLSHGSPHSFSSLTPSFLPMLMLKPL*KIGSPGSRSLIT 5120
Range 5: 5002 to 5541 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
197.2 bits(424) | 0.0 | 97/180(54%) | 0/180(0%) | Minus/Minus |
Query 2 VAGIQWNL*KESVK*KLPIWLCAP*FCSFDLRL*KFQTFPNGHEKGH*IITFMSWIYAFKSFTCIAQLLASSTPVFIKELLGRFITTSHFTVFLQRHLSNPPGPG*FQVT*WDMGFKPFLI*AFRLKFLNFAILILAKEKHDL*PRITTQLLLSHPFIPPNANIETIKEAGLTWKQIPYY 541 VA IQWN *++ VK K I LCAP* CS L L*K T P+ H K IIT MS + AFKSFT IA LLA + VFI+ELL I +H TV Q H +P PG* Q+ + F+PF I* RLK NF I ILA EKH+ P +TTQ L H FI N N ETI E LTWK IPY+ Subject 5002 VASIQWNF*QKCVKQKFSIRLCAP*LCSLHLWL*KL*TLPDSH*KSDGIITLMSRVNAFKSFTSIA*LLAHTPSVFIEELLSCLIPATHLTVLFQGHFPDPSSPG*LQIAQGYVCFEPFFI*TLRLKLFNFTIFILA*EKHNFKPWVTTQFFLPHTFIFANVNAETIVENWLTWK*IPYH 5541
Range 6: 5003 to 5542 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
180.7 bits(388) | 0.0 | 98/180(54%) | 0/180(0%) | Plus/Plus |
Query 3 **GICFQVSPASLMVSMLALGGMKG*ERRSCVVILG*RSCFSLAKMRIAKLRNLSLNAQMRNGLKPISH*VTWNQPGPGGLERWR*RNTVK*DVVMKRPNSSLMNTGVEEASN*AMHVKDLKAYIQDIKVMIQ*PFSWPLGNV*NFQSLKSKLQN*GAQSHMGSFYLTLSFQRFH*MPAT 542 **GI FQVS S MVS L L MK * R++CVV G + CFS A+M+I KL++LSL+ QM+NG K * W+QPG G +W *++TV+ M++ +SS MNT ASN*AM VKDLKA+ DI+VMI F W G+V*+FQS K +LQ+*GAQS M +F LT Q+FH*M AT Subject 5003 **GIYFQVSQFSTMVSALTLAKMKV*GRKNCVVTHGLKLCFS*ARMKIVKLKSLSLSVQMKNGSKHTYP*AIWSQPGLDGSGKWP*KSTVRCVAGMRQLSSSSMNTEGVWASN*AMLVKDLKAFTLDIRVMIPSLF*WLSGSV*SFQSHKWRLQS*GAQSLMENFCLTHFCQKFH*MLAT 5542
Range 7: 5006 to 5542 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
178.9 bits(384) | 0.0 | 91/179(51%) | 0/179(0%) | Minus/Minus |
Query 6 CGWHSVEPLKGKCQVKTSHMALRALILQLRLEALKISDVS*RP*ERSLNHYLYVLDICFQIFHMHCSIARFFHTCVHQRTVGSFHNHISLHGVPSTPSFQPTWPWLIPSYLMGYGF*TIPHLSIQTQVPQLRNPHLGQGKA*PLAKDHHTASPLSPLHSAQC*H*NH*RSWAHLEANPL 542 CG HS+E L CQ + H ALRAL LQ L ALK + S +P ++ NHY YV CFQIFH HC IAR + CVH+RT H + HG S P +P PWL P F*TI HL+ QTQ QL N H G KA* A HHT P S LH QC* *NH R AHLE +PL Subject 5006 CG*HSMELLTKMCQAEIFHKALRALALQPPLVALKTLNASGQPLKK*WNHYPYV*GKCFQIFHKHCLIARPYPLCVHRRTAELSHTRNAPHGALSRPFSRPI*PWLTPDCSRVCVF*TILHLNTQTQALQLHNLHPGLRKA*L*AMGHHTVFPPSHLHFCQC*C*NHCRKLAHLEVDPL 5542
Range 8: 5001 to 5543 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
166.0 bits(356) | 0.0 | 90/181(50%) | 0/181(0%) | Plus/Plus |
Query 1 CNKGFASR*AQLL*WFQC*HWAE*RGERGEAVW*SLAKGHAFPWPR*GLRS*GT*V*MLK*GMV*NPYPIK*LGINQGQVGWKDGVEGTP*SEMWL*NDPTVL**TQVWKKRAIEQCM*KI*KHISKT*R**FSDLSHGR*ETSEIFKASSRSCKIKARKAIWEVFT*HFPFKGSTECQPQ 543 C+KG SR*A L WFQ *HW +*R E G+ VW* +A +AF P * L S* *V*+ K* MV N + ++ G+NQG +G ++G+E P* + +*++ VL *TQ RAI+QC+*KI*KH+ T* **F +G E ++FKA+S CK KARKA+W++ *H K S EC PQ Subject 5001 CDKGSTSR*ANFLQWFQH*HWQK*RCEGGKTVW*PMA*SYAFLRPG*RL*S*RA*V*VFK*RMVQNTHTLEQSGVNQG*MGRENGLERAP*GALRV*DNSAVLR*TQRGYGRAIKQCL*KI*KHLP*T*G**FHHFFNGCPEAFKVFKATSGGCKAKARKALWKISA*HIFVKSSIEC*PQ 5543
Grapevine rupestris stem pitting associated virus isolate Tannat Rspav1, complete genome
Sequence ID: KR528585.1 Length: 8595 Number of Matches: 8
Range 1: 5170 to 5523 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
276.5 bits(597) | 0.0 | 112/118(95%) | 0/118(0%) | Plus/Plus |
Query 188 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH 541 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYE TQQFFDEHR G EQLSNACERFESIYPRHKGNDS+TFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLD+FLSKVPLNASH Subject 5170 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKVPLNASH 5523
Range 2: 4984 to 5118 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
108.7 bits(231) | 0.0 | 42/45(93%) | 0/45(0%) | Plus/Plus |
Query 2 VIRDLLPGEPSFFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQ 136 VIRDLLPGEP+FF+GFNVSIG+NEGVREEKLCGDPWLKVMLFLGQ Subject 4984 VIRDLLPGEPNFFSGFNVSIGKNEGVREEKLCGDPWLKVMLFLGQ 5118
Range 3: 5169 to 5519 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
207.3 bits(446) | 0.0 | 88/117(75%) | 0/117(0%) | Minus/Minus |
Query 187 LAFSGTFERKVSSKNFPYGFARLNFAAST*GFENFRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSKLLNGIWVLNH 537 LAFSGT +RK S++NFPYG AR + AAST GFEN RRF TA+RKV ES PLCLG MLSNLSHALL+CS +P LCSSKNC V S*P TSRCSF AI PTHLALVDS+LL G+WVLNH Subject 5169 LAFSGTLDRKESNRNFPYGLARRSLAASTWGFENLRRFRTAIRKVIESFPLCLG*MLSNLSHALLSCSPVPPLCSSKNC*VTS*PQRTSRCSFKAILPTHLALVDSRLLRGMWVLNH 5519
Range 4: 4983 to 5102 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
83.1 bits(175) | 0.0 | 34/40(85%) | 0/40(0%) | Minus/Minus |
Query 1 MTFSQGSPHSFSSLTPSFRPMLTLKPLKKLGSPGSKSLIT 120 MTF+ GSPH+FSSLTPSF PMLTLKPLKKLGSPGSKS +T Subject 4983 MTFNHGSPHNFSSLTPSFFPMLTLKPLKKLGSPGSKSRMT 5102
Range 5: 4987 to 5523 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
232.0 bits(500) | 0.0 | 100/179(56%) | 0/179(0%) | Minus/Minus |
Query 5 VAGIQWNL*KESVK*KLPIWLCAP*FCSFDLRL*KFQTFPNGHEKGH*IITFMSWIYAFKSFTCIAQLLASSTPVFIKELLGRFITTSHFTVFLQRHLSNPPGPG*FQVT*WDMGFKPFLI*AFRLKFLNFAILILAKEKHDL*PRITTQLLLSHPFIPPNANIETIKEAGLTWKQIPY 541 + I W+ ++ V *+LPIWL P*F SF+L L KF+T + H++G+*II+FM W+ AFK TCIAQLL SST + IKELL FITT+H + Q H ++PPGPG* Q+T D+GFKPF I*AF L NF ILIL +EKHD *P +TTQLLL + FI NAN++ +E LTW+Q+ Y Subject 4987 MTSI*WDFRQKGV**ELPIWLGPP*FGSFNLGLRKFETLSDSHKEGY*IISFMPWVNAFKPLTCIAQLLTSSTSMLIKELLSHFITTTHLPMLFQGHFTHPPGPG*LQITQGDVGFKPFFI*AF*LHLFNFTILILTQEKHDF*PWVTTQLLLPNTFILSNANVKATEEVRLTWEQVSY 5523
Range 6: 4994 to 5482 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
195.3 bits(420) | 0.0 | 92/163(56%) | 0/163(0%) | Minus/Minus |
Query 12 VKTSHMALRALILQLRLEALKISDVS*RP*ERSLNHYLYVLDICFQIFHMHCSIARFFHTCVHQRTVGSFHNHISLHGVPSTPSFQPTWPWLIPSYLMGYGF*TIPHLSIQTQVPQLRNPHLGQGKA*PLAKDHHTASPLSPLHSAQC*H*NH*RSWAHLEAN 500 + TSHMA A++ QL+ A KI D +P* R LNH+LY L CFQ HMHCS+A FH HQR V S HNH + S P + PTWPWL P Y G GF*TI HLSI T QL NPHL GKA* L HHT SP LHS QC* *+H*RS AHL A+ Subject 4994 IGTSHMAWPAVVWQLQPGASKI*DAFGQP*GRLLNHFLYALGKCFQTSHMHCSVAHQFHLYAHQRIVESLHNHNAPPDALSRPFYPPTWPWLTPDYSGGCGF*TILHLSILTPSLQLHNPHLDPGKA*LLTMGHHTTSPP*HLHSFQC*R*SH*RS*AHLGAS 5482
Range 7: 4997 to 5515 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
187.6 bits(403) | 0.0 | 97/173(56%) | 0/173(0%) | Plus/Plus |
Query 15 CFQVSPASLMVSMLALGGMKG*ERRSCVVILG*RSCFSLAKMRIAKLRNLSLNAQMRNGLKPISH*VTWNQPGPGGLERWR*RNTVK*DVVMKRPNSSLMNTGVEEASN*AMHVKDLKAYIQDIKVMIQ*PFSWPLGNV*NFQSLKSKLQN*GAQSHMGSFYLTLSFQRFH*M 533 C QVS S + LAL MK RRSCVV G*+SCFS KMRI KL+ S NAQM+NGLKP S *V W+QPGPGG +W *++ + VVMK N+SLM+ VE SN*AMHV+ LKA+ Q IK MIQ*P W +V NF+S + KL N G SHMGS Y T + H*M Subject 4997 CSQVSLTSSVALTLALERMKVLGRRSCVVTHG*KSCFSWVKMRIVKLKRWSQNAQMKNGLKPTSP*VIWSQPGPGGWVKWP*KSIGRCVVVMK*LNNSLMSIEVELVSN*AMHVRGLKAFTQGIKEMIQ*PSLWLSESVSNFRSPRLKLPNYGGPSHMGSSY*TPFCLKSH*M 5515
Range 8: 4983 to 5477 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
165.1 bits(354) | 0.0 | 88/165(53%) | 0/165(0%) | Plus/Plus |
Query 1 CNKGFASR*AQLL*WFQC*HWAE*RGERGEAVW*SLAKGHAFPWPR*GLRS*GT*V*MLK*GMV*NPYPIK*LGINQGQVGWKDGVEGTP*SEMWL*NDPTVL**TQVWKKRAIEQCM*KI*KHISKT*R**FSDLSHGR*ETSEIFKASSRSCKIKARKAIWEV 495 C+ A R*A LL W *HW E*R GE VW* + K HAFP R*GL S* V MLK* MV*NP+P +* G+NQGQVG +G+E +WL*+D T+L** W A EQCM*++*KH+ K *R *F++L +G + S+IF+A SC+ A +AIWEV Subject 4983 CHTRLAPR*A*LLQWL*R*HWKE*RC*GGEVVW*PMVKSHAFPGSR*GL*S*RDGVRMLK*RMV*NPHPPE*SGVNQGQVGG*NGLERASGGALWL*SDSTIL**A*RWNW*ATEQCM*EV*KHLPKA*RK*FNNLPYGCPKASQIFEAPG*SCQTTAGQAIWEV 5477
Nucleotide Sequence (449 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
332.4 | 1787.2 | 32% | 2.159e-89 | 89% | FR691076.1 | |
328.7 | 1616.7 | 35% | 2.74e-88 | 80% | KX274276.1 | |
329.1 | 1619.4 | 36% | 1.994e-88 | 80% | AY881626.1 | |
328.2 | 1609.8 | 36% | 3.764e-88 | 82% | KX925556.1 | |
327.8 | 1608.0 | 36% | 5.171e-88 | 80% | JX559646.1 |
Alignments
Grapevine rupestris stem pitting associated virus complete genome, genomic RNA, isolate GRSPaV MG
Sequence ID: FR691076.1 Length: 8749 Number of Matches: 7
Range 1: 3274 to 3693 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
332.4 bits(719) | 0.0 | 135/140(96%) | 0/140(0%) | Minus/Plus |
Query 22 SVPGHGNCFWHSDGFLLSTDGFALKAGIRPFVESERLISSDLSAPTISKQLEENAYAENEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRPEVDVLNYLCRPSTKH 441 SVPG GNCFWHS GFLLSTDGFALKAGIR FVESERLISSDLSAPTISKQLEENAYAENEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGR EVDVLNYLCRPST H Subject 3274 SVPGDGNCFWHSVGFLLSTDGFALKAGIRSFVESERLISSDLSAPTISKQLEENAYAENEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNH 3693
Range 2: 3270 to 3695 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
317.2 bits(686) | 0.0 | 131/142(92%) | 0/142(0%) | Minus/Plus |
Query 20 YLRTWSWQLLLAFRWFPAQY*WFRSEGRHSTFCGE*APY*FRSFSSNHF*TIGRECLC*E*DDCIILYPAPRKADSSNTRI*S*LEIWGK*VAPMWNSLPEVQSLPTMCPTEWLHDHGHCLSAWEA*S*CVKLSM*A*HQTH 445 +LRTW WQLLLAF WF AQY*WF SEGRHS FCGE*APY*FRSFSSNHF*TIGRECLC E*DDCIILYPAPRKADSSNTRI*S*LE+WGK*VAPMWNSLPEVQSLPTM PTEWLHDHGHCLSAWEA*S*CVKLSM A*HQ H Subject 3270 FLRTW*WQLLLAFSWFSAQY*WFCSEGRHSIFCGE*APY*FRSFSSNHF*TIGRECLCRE*DDCIILYPAPRKADSSNTRI*S*LEVWGK*VAPMWNSLPEVQSLPTMRPTEWLHDHGHCLSAWEA*S*CVKLSMQA*HQPH 3695
Range 3: 3271 to 3708 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
292.5 bits(632) | 0.0 | 130/146(89%) | 0/146(0%) | Plus/Minus |
Query 7 QNVLGVFGARPT*II*HINFRPPKR*GNGRDHATIQWGTWLEVIGLQAKNST*GPLTFPKFPTNFIFWCYYYQPYVVPDTK*CNHXXXXXXXXFQLFRNGWS*KI*TNKALTLHKRSNACLQSETISTEQETI*MPKAIAMTRYGD 444 Q + V GARP *II*HINF PPKR*GNGRDHATIQWG WLEVIGLQAKNST*GPLTFPK PTNFIFWCYYYQPYVVPDTK*CNHLIL ISILFQLFRNGWS*KI*TNKALTLHKRSNA LQS+TISTEQ+T *MPKAIA+TRYG+ Subject 3271 QLLKNVVGARPA*II*HINFTPPKR*GNGRDHATIQWGAWLEVIGLQAKNST*GPLTFPKLPTNFIFWCYYYQPYVVPDTK*CNHLILGISILFQLFRNGWS*KI*TNKALTLHKRSNAGLQSKTISTEQKTN*MPKAIAITRYGE 3708
Range 4: 3272 to 3694 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
282.9 bits(611) | 0.0 | 129/141(91%) | 0/141(0%) | Plus/Minus |
Query 21 CVWC*AYIDNLTHQLQASQALRQWP*SCNHSVGHMVGSDWTSGKEFHIGATHFPQISNXXXXXXXXXXXXRGAGYKIMQSSHSQHKHSLPIV*KWLELKDLN**GAHSPQKVECLPSERNHQY*AGNHLNAKSNCHDQVRR 443 C WC*A IDNLTHQL ASQALRQWP*SCNHSVG MVGSDWTSGKEFHIGATHFPQ SN*LHILVLLLSALRGAGYKIMQSSHS+HKHSLPIV*KWLELKDLN**GAHSPQK+EC PSE+NHQY*A N LNAKSNCH QVRR Subject 3272 CGWC*ACIDNLTHQLHASQALRQWP*SCNHSVGRMVGSDWTSGKEFHIGATHFPQTSN*LHILVLLLSALRGAGYKIMQSSHSRHKHSLPIV*KWLELKDLN**GAHSPQKIECRPSEQNHQY*AENQLNAKSNCHHQVRR 3694
Range 5: 3266 to 3694 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
275.5 bits(595) | 0.0 | 133/143(93%) | 0/143(0%) | Minus/Plus |
Query 21 TLSPYLVMAIAFGIQMVSCSVLMVSL*RQAFDLLWRVSALLVQIFQLQPFLNNWKXXXXXXXXXLHYFVSGTT*G****HQNMKLVGNLGKVSGPYVEFFA*SPITSNHVPH*MVA*SRPLPQRLGGLKLMC*IIYVGLAPNT 449 TLSPYLVMAIAFGIQ+V CSVLMV L*R AFDLLWRVSALLVQIFQLQPFLNNWKRMLM RMR*LHYFVSGTT*G****HQNMKLVG+LGKVSGPYVEFFA*SPITSNH PH*MVA*SRPLPQRLGG+KLMC*IIY GLAP T Subject 3266 TLSPYLVMAIAFGIQLVFCSVLMVLL*RPAFDLLWRVSALLVQIFQLQPFLNNWKRMLMPRMR*LHYFVSGTT*G****HQNMKLVGSLGKVSGPYVEFFA*SPITSNHAPH*MVA*SRPLPQRLGGVKLMC*IIYAGLAPTT 3694
Range 6: 3468 to 3689 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
175.6 bits(377) | 0.0 | 73/74(99%) | 0/74(0%) | Plus/Minus |
Query 26 LVLGLHR*FNTSTSGLPSAEAMAVIMQPFSGAHGWK*LDFRQRIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQ 247 LVLGLHR*FNTSTS LPSAEAMAVIMQPFSGAHGWK*LDFRQRIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQ Subject 3468 LVLGLHR*FNTSTSRLPSAEAMAVIMQPFSGAHGWK*LDFRQRIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQ 3689
Range 7: 3273 to 3422 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
111.0 bits(236) | 0.0 | 47/50(94%) | 0/50(0%) | Plus/Minus |
Query 293 CLEMVGAERSELIRRSLSTKGRMPAFRAKPSVLSRKPSECQKQLP*PGTE 442 CLEMVGAERSELIRRSLSTK RMPAFRAKPSVLSRKP+ECQKQLP PGTE Subject 3273 CLEMVGAERSELIRRSLSTKDRMPAFRAKPSVLSRKPTECQKQLPSPGTE 3422
Grapevine rupestris stem pitting associated virus isolate SK704 C, complete genome
Sequence ID: KX274276.1 Length: 8726 Number of Matches: 7
Range 1: 3275 to 3694 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
328.7 bits(711) | 0.0 | 132/140(94%) | 0/140(0%) | Minus/Plus |
Query 22 SVPGHGNCFWHSDGFLLSTDGFALKAGIRPFVESERLISSDLSAPTISKQLEENAYAENEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRPEVDVLNYLCRPSTKH 441 SVPG GNCFWHS GFLLSTDG ALKAGIR FVESERL+SSDLSAPTISKQLEENAYAENEMIALFC+RHHVRLIVVTPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGR EVDVLNYLCRPST H Subject 3275 SVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESERLVSSDLSAPTISKQLEENAYAENEMIALFCVRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNH 3694
Range 2: 3271 to 3696 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
269.1 bits(581) | 0.0 | 116/142(82%) | 0/142(0%) | Minus/Plus |
Query 20 YLRTWSWQLLLAFRWFPAQY*WFRSEGRHSTFCGE*APY*FRSFSSNHF*TIGRECLC*E*DDCIILYPAPRKADSSNTRI*S*LEIWGK*VAPMWNSLPEVQSLPTMCPTEWLHDHGHCLSAWEA*S*CVKLSM*A*HQTH 445 +LRTW WQLLLAF WF AQY*W SEGRHS F G+* P *FRSFSSN+F*TIG ECLC*+*+DCIIL PAPRKADS NTRI*S*LEIWGK*VA MWNSLPEVQSLP + P EWLHDH HCLSAWEA*S*CVKLS+*A*H H Subject 3271 FLRTW*WQLLLAFSWFLAQY*WSCSEGRHSIFRGK*TPG*FRSFSSNYF*TIGGECLC*K*NDCIILCPAPRKADSGNTRI*S*LEIWGK*VASMWNSLPEVQSLPALRPIEWLHDHSHCLSAWEA*S*CVKLSV*A*H*PH 3696
Range 3: 3272 to 3709 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
265.5 bits(573) | 0.0 | 119/146(82%) | 0/146(0%) | Plus/Minus |
Query 7 QNVLGVFGARPT*II*HINFRPPKR*GNGRDHATIQWGTWLEVIGLQAKNST*GPLTFPKFPTNFIFWCYYYQPYVVPDTK*CNHXXXXXXXXFQLFRNGWS*KI*TNKALTLHKRSNACLQSETISTEQETI*MPKAIAMTRYGD 444 Q + V ARPT II*HINF PPKR*GNG DHATIQWG LEVIGLQAKNST* PLTFPKFPTNFIFWCY+YQPYVVPDTK*CNH I SI IL QLFRN WS*KI*TN+A T H+RSNA LQS+TISTEQET *MPKAIA+TRYG+ Subject 3272 QLLKNVVSARPTQII*HINFTPPKR*GNGCDHATIQWGARLEVIGLQAKNST*RPLTFPKFPTNFIFWCYHYQPYVVPDTK*CNHFIFSIGILLQLFRNSWS*KI*TNQAFTFHERSNAGLQSKTISTEQETN*MPKAIAITRYGE 3709
Range 4: 3469 to 3690 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
168.3 bits(361) | 0.0 | 70/74(95%) | 0/74(0%) | Plus/Minus |
Query 26 LVLGLHR*FNTSTSGLPSAEAMAVIMQPFSGAHGWK*LDFRQRIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQ 247 LVLGLHR*FNTSTS LPSAEAMAVIMQPF+GA GWK*LDFRQRIPHRGHSLSPNFQLTSYSGVTTISLTWCR Q Subject 3469 LVLGLHR*FNTSTSRLPSAEAMAVIMQPFNGAQGWK*LDFRQRIPHRGHSLSPNFQLTSYSGVTTISLTWCRTQ 3690
Range 5: 3274 to 3423 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
104.2 bits(221) | 0.0 | 43/50(86%) | 0/50(0%) | Plus/Minus |
Query 293 CLEMVGAERSELIRRSLSTKGRMPAFRAKPSVLSRKPSECQKQLP*PGTE 442 CLE+VGAERSEL RRSLSTK RMPAFRA+PSVLS+KP+ECQKQLP PGTE Subject 3274 CLEIVGAERSELTRRSLSTKDRMPAFRARPSVLSKKPTECQKQLPSPGTE 3423
Range 6: 3267 to 3695 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
243.5 bits(525) | 0.0 | 121/143(85%) | 0/143(0%) | Minus/Plus |
Query 21 TLSPYLVMAIAFGIQMVSCSVLMVSL*RQAFDLLWRVSALLVQIFQLQPFLNNWKXXXXXXXXXLHYFVSGTT*G****HQNMKLVGNLGKVSGPYVEFFA*SPITSNHVPH*MVA*SRPLPQRLGGLKLMC*IIYVGLAPNT 449 TLSPYLVMAIAFGIQ+VSCSVLMV L*R AFDL W+V+A LVQIFQLQ FLNNW+RM ML+M+*LHYFVSGTT*G** *HQNMKLVGNLGKVSG YVEFFA*SPITS+ PH*MVA*S+PLPQRLGG+KLMC*II VGLA T Subject 3267 TLSPYLVMAIAFGIQLVSCSVLMVLL*RPAFDLSWKVNAWLVQIFQLQLFLNNWRRMPMLKMK*LHYFVSGTT*G**W*HQNMKLVGNLGKVSGLYVEFFA*SPITSSLAPH*MVA*SQPLPQRLGGVKLMC*IICVGLALTT 3695
Range 7: 3273 to 3695 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
237.5 bits(512) | 0.0 | 113/141(80%) | 0/141(0%) | Plus/Minus |
Query 21 CVWC*AYIDNLTHQLQASQALRQWP*SCNHSVGHMVGSDWTSGKEFHIGATHFPQISNXXXXXXXXXXXXRGAGYKIMQSSHSQHKHSLPIV*KWLELKDLN**GAHSPQKVECLPSERNHQY*AGNHLNAKSNCHDQVRR 443 C C*AY DNLTHQL ASQALRQW *SCNHS+G GSDWTSGKEFHI ATHFPQISN*LHILVL LSALRGAG+KIMQS H QH+HS PIV*K LELKDLN* G H P+K+EC PSE++HQY*A N LNAKSNCH QVRR Subject 3273 CG*C*AYTDNLTHQLHASQALRQWL*SCNHSMGRKAGSDWTSGKEFHIEATHFPQISN*LHILVLPLSALRGAGHKIMQSFHFQHRHSPPIV*K*LELKDLN*PGVHFPRKIECRPSEQDHQY*ARNQLNAKSNCHHQVRR 3695
Rupestris stem pitting associated virus strain SG1, complete genome
Sequence ID: AY881626.1 Length: 8742 Number of Matches: 7
Range 1: 3274 to 3693 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
329.1 bits(712) | 0.0 | 131/140(94%) | 0/140(0%) | Minus/Plus |
Query 22 SVPGHGNCFWHSDGFLLSTDGFALKAGIRPFVESERLISSDLSAPTISKQLEENAYAENEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRPEVDVLNYLCRPSTKH 441 SVPG GNCFWHS GFLLSTDGFALKAGIR FVESERL+SSDLSAPTISKQLEENAYAENEMIALFCIRHHVRLIV+TPEYEVSWKFGESEWPLCGILCL+SNHFQPCAP+NGCMITAIASALGR EVDVLNYLCRPST H Subject 3274 SVPGDGNCFWHSVGFLLSTDGFALKAGIRSFVESERLVSSDLSAPTISKQLEENAYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLRSNHFQPCAPINGCMITAIASALGRREVDVLNYLCRPSTNH 3693
Range 2: 3270 to 3695 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
275.1 bits(594) | 0.0 | 114/142(80%) | 0/142(0%) | Minus/Plus |
Query 20 YLRTWSWQLLLAFRWFPAQY*WFRSEGRHSTFCGE*APY*FRSFSSNHF*TIGRECLC*E*DDCIILYPAPRKADSSNTRI*S*LEIWGK*VAPMWNSLPEVQSLPTMCPTEWLHDHGHCLSAWEA*S*CVKLSM*A*HQTH 445 +L W WQLLLAF WF QY*WF EGRHS FCGE*AP *FRSFSSNHF*TIGRECLC +*+DC ILYPAPRKADS+NTRI*S*LEIWGK VAPMWNS+PEVQSLPTM P +WLHD+GHC S WEA*S*CV+LS+*A*H +H Subject 3270 FLCAW*WQLLLAFSWFLTQY*WFCFEGRHSIFCGE*APG*FRSFSSNHF*TIGRECLCRK*NDCTILYPAPRKADSNNTRI*S*LEIWGKRVAPMWNSVPEVQSLPTMRPNKWLHDYGHCFSTWEA*S*CVELSV*A*H*SH 3695
Range 3: 3277 to 3708 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
261.8 bits(565) | 0.0 | 117/144(81%) | 0/144(0%) | Plus/Minus |
Query 7 QNVLGVFGARPT*II*HINFRPPKR*GNGRDHATIQWGTWLEVIGLQAKNST*GPLTFPKFPTNFIFWCYYYQPYVVPDTK*CNHXXXXXXXXFQLFRNGWS*KI*TNKALTLHKRSNACLQSETISTEQETI*MPKAIAMTRY 438 Q + V ARPT II HINF PPK * NGR+HATI WG WLEVIG QA+NST*GPL FPKFPTNFIFWCYYYQPYVVPDTK*CNH I ISILFQLFRNGWS*KI*TN+ALTLHKRSNA LQS+TISTE ET *MPKAIA+TR+ Subject 3277 QLLKNVISARPTQIIQHINFTPPKC*SNGRNHATIYWGAWLEVIGPQAQNST*GPLAFPKFPTNFIFWCYYYQPYVVPDTK*CNHFIFGISILFQLFRNGWS*KI*TNQALTLHKRSNAGLQSKTISTE*ETN*MPKAIAITRH 3708
Range 4: 3468 to 3689 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
165.1 bits(354) | 0.0 | 69/74(93%) | 0/74(0%) | Plus/Minus |
Query 26 LVLGLHR*FNTSTSGLPSAEAMAVIMQPFSGAHGWK*LDFRQRIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQ 247 LVLGLHR*FNTSTS LPSAEAMAVIMQPF GAHGWK*LD R RIPHRGHSLSPNFQLTSYSGV TISLTWCRIQ Subject 3468 LVLGLHR*FNTSTSRLPSAEAMAVIMQPFIGAHGWK*LDLRHRIPHRGHSLSPNFQLTSYSGVITISLTWCRIQ 3689
Range 5: 3273 to 3422 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.0 bits(225) | 0.0 | 44/50(88%) | 0/50(0%) | Plus/Minus |
Query 293 CLEMVGAERSELIRRSLSTKGRMPAFRAKPSVLSRKPSECQKQLP*PGTE 442 CLEMVGAERSEL RRSLSTK RMPAF+AKPSVLS+KP+ECQKQLP PGTE Subject 3273 CLEMVGAERSELTRRSLSTKDRMPAFKAKPSVLSKKPTECQKQLPSPGTE 3422
Range 6: 3272 to 3694 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
246.7 bits(532) | 0.0 | 114/141(81%) | 0/141(0%) | Plus/Minus |
Query 21 CVWC*AYIDNLTHQLQASQALRQWP*SCNHSVGHMVGSDWTSGKEFHIGATHFPQISNXXXXXXXXXXXXRGAGYKIMQSSHSQHKHSLPIV*KWLELKDLN**GAHSPQKVECLPSERNHQY*AGNHLNAKSNCHDQVRR 443 C C*AY DN THQL ASQ L+QWP*SCNH +G MVGSDWTSG EFHIGAT FPQISN*LHILVLLLSALRGAGYKI+QS H +HKHSLPIV*KWLELKDLN* GAHSPQK+EC PS++NHQY* N LNAKSNCH Q +R Subject 3272 CD*C*AYTDNSTHQLHASQVLKQWP*SCNHLLGRMVGSDWTSGTEFHIGATRFPQISN*LHILVLLLSALRGAGYKIVQSFHFRHKHSLPIV*KWLELKDLN*PGAHSPQKIECRPSKQNHQY*VRNQLNAKSNCHHQAQR 3694
Range 7: 3266 to 3685 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
235.7 bits(508) | 0.0 | 120/140(86%) | 0/140(0%) | Minus/Plus |
Query 30 TLSPYLVMAIAFGIQMVSCSVLMVSL*RQAFDLLWRVSALLVQIFQLQPFLNNWKXXXXXXXXXLHYFVSGTT*G****HQNMKLVGNLGKVSGPYVEFFA*SPITSNHVPH*MVA*SRPLPQRLGGLKLMC*IIYVGLA 449 TLS LVMAIAFGIQ+VS SVLMV L*R AFDLLWRVSA LVQIFQLQPFLNNWKRMLM +M+*LHYFVSGTT*G****HQNMKLVGNLGK SGPYVEF A* PITSNH P *MVA* RPL Q LGG+KLMC*II VGLA Subject 3266 TLSLCLVMAIAFGIQLVSYSVLMVLL*RPAFDLLWRVSAWLVQIFQLQPFLNNWKRMLMPKMK*LHYFVSGTT*G****HQNMKLVGNLGKASGPYVEFCA*GPITSNHAPQ*MVA*LRPLLQHLGGVKLMC*IICVGLA 3685
Grapevine rupestris stem pitting associated virus isolate TEMP BR replicase, 24.4 kDa protein, 12.8 kDa protein, 8.4 kDa protein, and 28 kDa protein genes, complete cds
Sequence ID: KX925556.1 Length: 8700 Number of Matches: 7
Range 1: 3263 to 3682 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
328.2 bits(710) | 0.0 | 131/140(94%) | 0/140(0%) | Minus/Plus |
Query 22 SVPGHGNCFWHSDGFLLSTDGFALKAGIRPFVESERLISSDLSAPTISKQLEENAYAENEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRPEVDVLNYLCRPSTKH 441 SVPG GNCFWHS GFLLSTDG ALKAGIR FVESERL+SSDLSAPT+SKQLEENAYAENEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGR EVD+LNYLCRPST H Subject 3263 SVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESERLVSSDLSAPTVSKQLEENAYAENEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDILNYLCRPSTNH 3682
Range 2: 3259 to 3684 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
270.5 bits(584) | 0.0 | 118/142(83%) | 0/142(0%) | Minus/Plus |
Query 20 YLRTWSWQLLLAFRWFPAQY*WFRSEGRHSTFCGE*APY*FRSFSSNHF*TIGRECLC*E*DDCIILYPAPRKADSSNTRI*S*LEIWGK*VAPMWNSLPEVQSLPTMCPTEWLHDHGHCLSAWEA*S*CVKLSM*A*HQTH 445 +L TW QLLLAF WF QY* F SEG HS FCGE*AP *FRSFSSN F*TIGR+CLC*E*DDCI+LYPAP K DSSNTRI*S*LEIWGK*VAPMWNSLPEVQSLPTM PTEWLHDHGHCLSAWEA*S* KLS+* *H +H Subject 3259 FLCTW*RQLLLAFSWFLTQY*RFSSEGWHSIFCGE*APS*FRSFSSNRF*TIGRKCLC*E*DDCIVLYPAPCKTDSSNTRI*S*LEIWGK*VAPMWNSLPEVQSLPTMRPTEWLHDHGHCLSAWEA*S*YFKLSV*T*H*SH 3684
Range 3: 3266 to 3697 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
265.0 bits(572) | 0.0 | 121/144(84%) | 0/144(0%) | Plus/Minus |
Query 7 QNVLGVFGARPT*II*HINFRPPKR*GNGRDHATIQWGTWLEVIGLQAKNST*GPLTFPKFPTNFIFWCYYYQPYVVPDTK*CNHXXXXXXXXFQLFRNGWS*KI*TNKALTLHKRSNACLQSETISTEQETI*MPKAIAMTRY 438 Q + V AR T II*+INF PPKR*GNGRDHATIQWG WLEVIGLQAKNST*GPLTFPKFPTNFIFWCYYYQ Y+VPDT+ CNHLILSISI FQLFRNGWS*KI*TN ALTLHKRSNA LQS T+STE ET *MPKAIA+TRY Subject 3266 QLLKNVISARSTQII*NINFTPPKR*GNGRDHATIQWGAWLEVIGLQAKNST*GPLTFPKFPTNFIFWCYYYQSYMVPDTEQCNHLILSISIFFQLFRNGWS*KI*TN*ALTLHKRSNASLQS*TVSTE*ETN*MPKAIAVTRY 3697
Range 4: 3457 to 3678 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
170.1 bits(365) | 0.0 | 71/74(96%) | 0/74(0%) | Plus/Minus |
Query 26 LVLGLHR*FNTSTSGLPSAEAMAVIMQPFSGAHGWK*LDFRQRIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQ 247 LVLGLHR*F STS LPSAEAMAVIMQPFSGAHGWK*LDFRQRIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQ Subject 3457 LVLGLHR*FKISTSRLPSAEAMAVIMQPFSGAHGWK*LDFRQRIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQ 3678
Range 5: 3262 to 3411 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
104.6 bits(222) | 0.0 | 44/50(88%) | 0/50(0%) | Plus/Minus |
Query 293 CLEMVGAERSELIRRSLSTKGRMPAFRAKPSVLSRKPSECQKQLP*PGTE 442 CLE VGAERSEL RRSLSTK RMPAFRAKPSVLS+KP+ECQKQLP PGTE Subject 3262 CLETVGAERSELTRRSLSTKDRMPAFRAKPSVLSKKPTECQKQLPSPGTE 3411
Range 6: 3261 to 3683 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
244.8 bits(528) | 0.0 | 116/141(82%) | 0/141(0%) | Plus/Minus |
Query 21 CVWC*AYIDNLTHQLQASQALRQWP*SCNHSVGHMVGSDWTSGKEFHIGATHFPQISNXXXXXXXXXXXXRGAGYKIMQSSHSQHKHSLPIV*KWLELKDLN**GAHSPQKVECLPSERNHQY*AGNHLNAKSNCHDQVRR 443 C C* Y DNL +QL ASQALRQWP*SCNHSVG MVGSDWTSGKEFHIGATHFPQISN*LHILVLLLS L GAGY+ MQSSHSQHKH LPIV*K LELKDLN* GAHSPQK+EC PSE N QY* N LNAKSNC QV+R Subject 3261 CD*C*VYTDNLKYQLHASQALRQWP*SCNHSVGRMVGSDWTSGKEFHIGATHFPQISN*LHILVLLLSVLHGAGYRTMQSSHSQHKHFLPIV*KRLELKDLN*LGAHSPQKIECQPSELNRQY*VRNQLNAKSNCRHQVQR 3683
Range 7: 3258 to 3674 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
226.5 bits(488) | 0.0 | 120/139(86%) | 0/139(0%) | Minus/Plus |
Query 30 LSPYLVMAIAFGIQMVSCSVLMVSL*RQAFDLLWRVSALLVQIFQLQPFLNNWKXXXXXXXXXLHYFVSGTT*G****HQNMKLVGNLGKVSGPYVEFFA*SPITSNHVPH*MVA*SRPLPQRLGGLKLMC*IIYVGLA 446 LS YLV AIAFGIQ+VS SVL V L*R AFDLLWRVSA LVQIFQLQPFLNNWK+MLMLRMR*LH VSGT * ****HQNMKLVGNLGKVSGPYVEFFA*SPITSNH PH*MVA*SRPLPQRLGG+KL+ *II V LA Subject 3258 LSLYLVTAIAFGIQLVSYSVLTV*L*RLAFDLLWRVSA*LVQIFQLQPFLNNWKKMLMLRMR*LHCSVSGTM*D****HQNMKLVGNLGKVSGPYVEFFA*SPITSNHAPH*MVA*SRPLPQRLGGVKLIF*IICVDLA 3674
Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome
Sequence ID: JX559646.1 Length: 8726 Number of Matches: 7
Range 1: 3274 to 3693 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
327.8 bits(709) | 0.0 | 130/140(93%) | 0/140(0%) | Minus/Plus |
Query 22 SVPGHGNCFWHSDGFLLSTDGFALKAGIRPFVESERLISSDLSAPTISKQLEENAYAENEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRPEVDVLNYLCRPSTKH 441 SVPG GNCFWHS GFLLSTDGFALKAGIR FVESERL+SSDLSAPTISKQLEENAYAENEMIALFCIRHHVRLIV+TPEYEVSWKFGESEWPLCGILCL+SNHFQPCAP+NGCMITAIASALGR EVDVLNYLC+PST H Subject 3274 SVPGDGNCFWHSVGFLLSTDGFALKAGIRSFVESERLVSSDLSAPTISKQLEENAYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLRSNHFQPCAPINGCMITAIASALGRREVDVLNYLCKPSTNH 3693
Range 2: 3270 to 3695 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
274.6 bits(593) | 0.0 | 114/142(80%) | 0/142(0%) | Minus/Plus |
Query 20 YLRTWSWQLLLAFRWFPAQY*WFRSEGRHSTFCGE*APY*FRSFSSNHF*TIGRECLC*E*DDCIILYPAPRKADSSNTRI*S*LEIWGK*VAPMWNSLPEVQSLPTMCPTEWLHDHGHCLSAWEA*S*CVKLSM*A*HQTH 445 +L W WQLLLAF WF QY*WF EGRHS FCGE*AP *FRSFSSNHF*TIGRECLC +*+DC ILYPAPRKADS NTRI*S*LEIWGK VAPMWNS+PEVQSLPTM P +WLHD+GHC S WEA*S*CV+LS+*A*H +H Subject 3270 FLCAW*WQLLLAFSWFLTQY*WFCFEGRHSIFCGE*APG*FRSFSSNHF*TIGRECLCRK*NDCTILYPAPRKADSDNTRI*S*LEIWGKRVAPMWNSVPEVQSLPTMRPNKWLHDYGHCFSTWEA*S*CVELSV*A*H*SH 3695
Range 3: 3277 to 3708 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
254.9 bits(550) | 0.0 | 115/144(80%) | 0/144(0%) | Plus/Minus |
Query 7 QNVLGVFGARPT*II*HINFRPPKR*GNGRDHATIQWGTWLEVIGLQAKNST*GPLTFPKFPTNFIFWCYYYQPYVVPDTK*CNHXXXXXXXXFQLFRNGWS*KI*TNKALTLHKRSNACLQSETISTEQETI*MPKAIAMTRY 438 Q + V AR T II HINF PPK * NGR+HATI WG WLEVIG QA+NST*GPL FPKFPTNFIFWCY+YQPYVVPDTK*CNH I ISILFQLFRNGWS*KI*TN+ALTLHKRSNA LQS+TISTE ET *MPKAIA+TR+ Subject 3277 QLLKNVISARLTQIIQHINFTPPKC*SNGRNHATIYWGAWLEVIGPQAQNST*GPLAFPKFPTNFIFWCYHYQPYVVPDTK*CNHFIFGISILFQLFRNGWS*KI*TNQALTLHKRSNAGLQSKTISTE*ETN*MPKAIAITRH 3708
Range 4: 3468 to 3689 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
165.1 bits(354) | 0.0 | 69/74(93%) | 0/74(0%) | Plus/Minus |
Query 26 LVLGLHR*FNTSTSGLPSAEAMAVIMQPFSGAHGWK*LDFRQRIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQ 247 LVLGLHR*FNTSTS LPSAEAMAVIMQPF GAHGWK*LD R RIPHRGHSLSPNFQLTSYSGV TISLTWCRIQ Subject 3468 LVLGLHR*FNTSTSRLPSAEAMAVIMQPFIGAHGWK*LDLRHRIPHRGHSLSPNFQLTSYSGVITISLTWCRIQ 3689
Range 5: 3273 to 3422 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.0 bits(225) | 0.0 | 44/50(88%) | 0/50(0%) | Plus/Minus |
Query 293 CLEMVGAERSELIRRSLSTKGRMPAFRAKPSVLSRKPSECQKQLP*PGTE 442 CLEMVGAERSEL RRSLSTK RMPAF+AKPSVLS+KP+ECQKQLP PGTE Subject 3273 CLEMVGAERSELTRRSLSTKDRMPAFKAKPSVLSKKPTECQKQLPSPGTE 3422
Range 6: 3272 to 3694 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
246.7 bits(532) | 0.0 | 113/141(80%) | 0/141(0%) | Plus/Minus |
Query 21 CVWC*AYIDNLTHQLQASQALRQWP*SCNHSVGHMVGSDWTSGKEFHIGATHFPQISNXXXXXXXXXXXXRGAGYKIMQSSHSQHKHSLPIV*KWLELKDLN**GAHSPQKVECLPSERNHQY*AGNHLNAKSNCHDQVRR 443 C C*AY DN THQL ASQ L+QWP*SCNH +G MVGSDWTSG EFHIGAT FPQISN*LHILVL LSALRGAGYKI+QS H +HKHSLPIV*KWLELKDLN* GAHSPQK+EC PS++NHQY* N LNAKSNCH Q +R Subject 3272 CD*C*AYTDNSTHQLHASQVLKQWP*SCNHLLGRMVGSDWTSGTEFHIGATRFPQISN*LHILVLSLSALRGAGYKIVQSFHFRHKHSLPIV*KWLELKDLN*PGAHSPQKIECRPSKQNHQY*VRNQLNAKSNCHHQAQR 3694
Range 7: 3266 to 3685 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
232.9 bits(502) | 0.0 | 119/140(85%) | 0/140(0%) | Minus/Plus |
Query 30 TLSPYLVMAIAFGIQMVSCSVLMVSL*RQAFDLLWRVSALLVQIFQLQPFLNNWKXXXXXXXXXLHYFVSGTT*G****HQNMKLVGNLGKVSGPYVEFFA*SPITSNHVPH*MVA*SRPLPQRLGGLKLMC*IIYVGLA 449 TLS LVMAIAFGIQ+VS SVLMV L*R AFDLLWRVSA LVQIFQLQPFLNNWKRMLM +M+*LHYFVSGTT*G****HQNMKLVGNLGK SGPYVEF A* PITSNH P *MVA* RPL Q LGG+KLMC*II V LA Subject 3266 TLSLCLVMAIAFGIQLVSYSVLMVLL*RPAFDLLWRVSAWLVQIFQLQPFLNNWKRMLMPKMK*LHYFVSGTT*G****HQNMKLVGNLGKASGPYVEFCA*GPITSNHAPQ*MVA*LRPLLQHLGGVKLMC*IICVSLA 3685
Nucleotide Sequence (1061 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
797.9 | 4179.0 | 32% | 0 | 86% | KX925556.1 | |
796.5 | 4120.4 | 32% | 0 | 84% | KX274276.1 | |
795.6 | 4086.9 | 32% | 0 | 83% | AY881626.1 | |
795.6 | 4105.2 | 32% | 0 | 83% | JX559646.1 | |
793.3 | 4085.5 | 32% | 0 | 83% | KC427107.1 |
Alignments
Grapevine rupestris stem pitting associated virus isolate TEMP BR replicase, 24.4 kDa protein, 12.8 kDa protein, 8.4 kDa protein, and 28 kDa protein genes, complete cds
Sequence ID: KX925556.1 Length: 8700 Number of Matches: 7
Range 1: 3668 to 4693 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
797.9 bits(1735) | 0.0 | 332/342(97%) | 0/342(0%) | Minus/Plus |
Query 24 PSTNHIFEELCQGGGLNMMYLAETFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIKIDELRKVKRSALDLLSMNGSKITYFPNFERAEKLQGCLLGGLTGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLPTPNTP 1049 PSTNHIFEELCQGGGLNMMYLAE FEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIK+DELRKVKRSALDLLSMNGS+ITYFPNFERAEKLQGCLLGGLTGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDD CKVAKAGKSKKEGWDVVTFEVFLRKVS LKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLL P Subject 3668 PSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSRITYFPNFERAEKLQGCLLGGLTGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKVSSLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKGP 4693
Range 2: 3667 to 4692 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
722.7 bits(1571) | 0.0 | 324/342(95%) | 0/342(0%) | Plus/Minus |
Query 25 GVFGVGRRKSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTKRLLSMLYLYVFPXXXXXXXXXXAPKIARSFCESYVLWHGSPASEMKASLRMTSKHRSIYPGGNN*TSSKITQCPAFKPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLGFISAVDIPESQGFASLNFSSLITPVRPPSKHPCNFSARSKFGK*VILDPFIERRSRADRLTFLNSSIFML*GPLPIFSTCLMCSLVISNKAEILPFGLMTSISPFISHLAQISKASKVSAKYIILSPPPWHSSSKMWLVLG 1050 G F + RRKSCILWKIA*SAKAAVIEPFLK*HG+LDSNIGFTKRLLSMLYLYVFPSSSLS+SLCSAP+IARSFCESYVLWHGSPASEMKASLRMTSKHRSIYPGGN+*TSSKITQ PAFK ETFLRKTSKVTTSHPSFFDLPALATLQ SSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLG ISAVDIPESQGFASLNFSSL+TPVRPPSKHPCNFSARSKFGK*VILDPFIERRSRADRLTFLNSS FML*GPLPIFSTCLMCSLVISN+AEILPFGLMTSISPF+SHLAQISKASK SAKYIILSPPPWHSSSKM LVLG Subject 3667 GPFDLARRKSCILWKIA*SAKAAVIEPFLK*HGNLDSNIGFTKRLLSMLYLYVFPSSSLSISLCSAPRIARSFCESYVLWHGSPASEMKASLRMTSKHRSIYPGGNS*TSSKITQ*PAFKLETFLRKTSKVTTSHPSFFDLPALATLQLSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLGLISAVDIPESQGFASLNFSSLMTPVRPPSKHPCNFSARSKFGK*VILDPFIERRSRADRLTFLNSSTFML*GPLPIFSTCLMCSLVISNRAEILPFGLMTSISPFMSHLAQISKASKASAKYIILSPPPWHSSSKM*LVLG 4692
Range 3: 3659 to 4678 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
680.1 bits(1478) | 0.0 | 302/340(89%) | 0/340(0%) | Plus/Minus |
Query 39 R*EEVMHIVEDCIISKGCSH*TFFEVTWQSRFKHWVHKTSAFYVVPICLSFKQSEYVTLLSSQNCSXXXXXXXXXXWITSK*NESITAYDK*TQIDISRGKQLNLIENHTMPSLQTRNFSKENFKGHYIPPFLL*FACFGNFAAIIHFKIIFD*ICQGSSRGNKSNKFSLRSLHETLIQETLSSPKCAKHDS*LSWLYIRS*YTRKPGFCITELFITYNTS*AP*QAPLQLFSPLKVWKIGYFGPIH*KKIKGGSLNLPQLIYFYALRAIADLLNMPYVLIGYIKQGGNLTIWVNDLNFPIYITLSANIKGLKSLSQVHHIKPSPLAQLLKNVVGARPTR 1058 R EEVMHI+EDCIISKG SH*TFFEVTW SRFKHWVHKT AFYVVP+ LSFKQSEY+TLLSSQNC+ILL*IICALAWITSK*+ESITAYDK*T IDISRGKQLNLIENHTM LQTRNFSKEN K H+IPPFLL*FACFGNFAAIIHFKIIFD*IC GSSRGNKS KFS R LHETLIQETLSSPKCAKHDS*LSWL I S*YTRKPGFCITELFITY+TS*AP*QAPLQLFSPLKVWKIGY GPIH*KK+KG LNLPQ IYFYALRAIADLL+MPYVLIGYIKQG NLTIWVNDLNFPIY+TLSANIKG KS SQVHHIKPS LAQLLKNV+ AR T+ Subject 3659 RQEEVMHIMEDCIISKGSSH*TFFEVTW*SRFKHWVHKTPAFYVVPVRLSFKQSEYITLLSSQNCTILL*IICALAWITSK*DESITAYDK*T*IDISRGKQLNLIENHTMTGLQTRNFSKENLKSHHIPPFLL*FACFGNFAAIIHFKIIFD*IC*GSSRGNKSYKFSFRPLHETLIQETLSSPKCAKHDS*LSWLNICS*YTRKPGFCITELFITYDTS*AP*QAPLQLFSPLKVWKIGYSGPIH*KKVKGRPLNLPQFIYFYALRAIADLLDMPYVLIGYIKQGRNLTIWVNDLNFPIYVTLSANIKGFKSFSQVHHIKPSSLAQLLKNVISARSTQ 4678
Range 4: 3670 to 4686 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
675.5 bits(1468) | 0.0 | 293/339(86%) | 0/339(0%) | Minus/Plus |
Query 31 *HQPHF*GAVPGGRA*YDVLG*DF*GL*YLR*V*YKWGN*GH*PKW*DFRLV*YNQ*AHKAC*EDRQWPSEHKNR*VEEG*AIRP*SSFNEWVQNNLFSKL*AG*KVARVLARGPNWCYK**KVQ*CKTLAFWYINCGYKAKRANCRAWHIWGWKEFLV*EFHEEI*GKICYFCFP*TSLGKFNQK*S*NG*WLQSCQSRQIKEGRVGCSDL*SFP*KSFWFEGWALCDFR*GSVVSPWIYRSVFTCHTQ*CFHFTCW*SMPEHI*FTEGSSNFGS*AE*HTQTA*RKDI*VQHRKQTFCEPNV*I*TAMSLQKRFNDCSLC*LCNLPQYA*LPPTDPK 1047 *H HF*GAVPG RA*YDVLG* F* L*YLR*V*+KWGN*GH*PKW*DF V*YNQ*AHKAC EDRQWPSEHK+R*+EEG*A+ P* SFNEWVQNNLFSKL*AG*KVARVLARGPNWC+K**KVQ*CKTLAFWYINC Y AKRANCRAWHIWGWKEFLV*EFHEE+* KIC FCFP TSL KFNQK*S*NG* LQSCQSRQIKEGRVGC D * FP*KSF FEG +LCDFR*GS VSPWIYRS+FTCHTQ*CFH TCW*SMPEHI*FT+GS N GS*AE*+TQTA*RKD+ VQHRKQ FCEPNV*I* MSLQKRFNDC LC*LCNLP YA*LPP + K Subject 3670 *H*SHF*GAVPGRRA*YDVLG*SF*SL*YLR*V*HKWGN*GH*PKW*DFCPV*YNQ*AHKACREDRQWPSEHKSR*IEEG*AVCP*PSFNEWVQNNLFSKL*AG*KVARVLARGPNWCHK**KVQ*CKTLAFWYINCRY*AKRANCRAWHIWGWKEFLV*EFHEEV*RKICNFCFPETSLSKFNQK*S*NG**LQSCQSRQIKEGRVGCGDF*GFP*KSF*FEGRSLCDFR*GSAVSPWIYRSMFTCHTQ*CFHLTCW*SMPEHI*FTKGSCNSGS*AE*YTQTA*RKDVQVQHRKQAFCEPNV*I*ITMSLQKRFNDCCLC*LCNLP*YA*LPPGEVK 4686
Range 5: 3663 to 4694 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
643.9 bits(1399) | 0.0 | 301/344(88%) | 0/344(0%) | Minus/Plus |
Query 23 VGLAPTTFLRSCARGEGLI*CTWLRLLRPLIFALSVI*MGKLRSLTQMVRFPPCLI*PMST*GMLRRSAMALRA*K*MS*GRLSDPPLIFFQ*MGPK*PIFQTLSGLKSCKGAC*GA*LVL*VMKSSVMQNPGFLVYQLRI*SQES*LSCLAHLGLERVSCIRVS*RDLRENLLLLFPLDEPWQIQSKMILKWMMAAKLPKQANQRRKGGM**PLKFSLEKFLV*RLGIV*FSMRFSCFPLDISICVYLSYAVMLSFHLLVIHARAHMIHRRIEQFWELSRVTYSDCLKERHIGTT*KADVL*TQCLNLDCHVTSKKVQ*LQPLLIMQSSTICMTSSYRPQTHP 1054 V LA TFLRSCAR EGLI*CTWL+LL+PLIFALSV *MGKLRSLTQMVRF PCLI*PMST*GM RRSAMALRA*K*M+*GRLS PL FFQ*MGP+*PIFQTLSGLKSCKGAC*GA*LV *VMKSSVMQNPGFLVYQL+I SQES*LSCLAHLGLERVSCIRVS*R L+ENL LLFP DEP QIQSKMILKWM+AAKLPKQANQRRKGGM * L+FSLEKFLV*R IV*FSMRFSCFPLDISI VYLSYAVMLS HLLVIHARAHMIH+RI QFWELSRV YSDCLKER GTT*KA VL*TQCLNLD HVTSKKVQ*L PLLIMQSS ICMTSS+R Q P Subject 3663 VDLALITFLRSCAREEGLI*CTWLKLLKPLIFALSVT*MGKLRSLTQMVRFLPCLI*PMST*GMSRRSAMALRA*K*MN*GRLSGLPLTFFQ*MGPE*PIFQTLSGLKSCKGAC*GA*LVS*VMKSSVMQNPGFLVYQLQILSQES*LSCLAHLGLERVSCIRVS*RGLKENL*LLFPRDEP*QIQSKMILKWMIAAKLPKQANQRRKGGMW*LLRFSLEKFLV*RPVIV*FSMRFSCFPLDISIYVYLSYAVMLSSHLLVIHARAHMIHKRIVQFWELSRVIYSDCLKERRTGTT*KAGVL*TQCLNLDYHVTSKKVQ*LLPLLIMQSSIICMTSSWRGQKGP 4694
Range 6: 4053 to 4685 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
416.7 bits(903) | 0.0 | 181/211(86%) | 0/211(0%) | Plus/Minus |
Query 32 LGSVGGSHAYCGRLHNQQRLQSLNLF*SDMAV*IQTLGSQNVCFLCCTYMSFLQAV*VCHSAQLPKLLDPSVNHMCSGMDHQQVK*KHHCV*QVNTDRYIQGETTEPHRKSHNAQPSNQKLF*GKLQRSLHPTLPSLICLLWQLCSHHPFQDHF*LNLPRLV*GKQK*QIFPQISS*NSYTRNSFQPQMCQARQLALLALYPQLIYQKARV 664 L S GGSHAY GRLHNQQR QSLNLF*SDM +*IQTLGSQN CFLCCT SFLQAV*V HSAQLP+L DP VNHMCSGMDHQQV+*KHHCV*QVN DRYIQGET EPHRKSHN +PSN KLF*GK Q+S HPTLPSLICLLWQLCS+HPFQDHF*LNL RLV GKQK QIF Q SS*NSYTRNSFQPQMCQARQLALLA Y QLIYQKARV Subject 4053 LTSPGGSHAYYGRLHNQQRQQSLNLF*SDMVI*IQTLGSQNACFLCCTCTSFLQAV*VYHSAQLPELHDPFVNHMCSGMDHQQVR*KHHCV*QVNIDRYIQGETAEPHRKSHNDRPSN*KLF*GKPQKSPHPTLPSLICLLWQLCSYHPFQDHF*LNLLRLVSGKQKLQIFLQTSS*NSYTRNSFQPQMCQARQLALLA*YLQLIYQKARV 4685
Range 7: 3669 to 4013 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
242.1 bits(522) | 0.0 | 101/115(88%) | 0/115(0%) | Plus/Minus |
Query 704 GPLASTLATFQPAQSLENRLFWTHSLKEDQGRIA*PSSTHLFLCSEGHCRSSQHALCAHWLYQTRRKSYHLG**PQFPHLYHT*RKYQRPQKSQPSTSY*ALPPGTAPQKCGWC* 1048 GPLASTLATFQPAQSLENRLFWTHSLKE QG+ A*PSS HL LCSEGHCRSS+HALCAHWLYQT +KSYHLG**PQFPHL HT*RKYQR QK QPSTSY*AL PGTAPQKC C* Subject 3669 GPLASTLATFQPAQSLENRLFWTHSLKEGQGQTA*PSSIHLLLCSEGHCRSSRHALCAHWLYQTGQKSYHLG**PQFPHLCHT*RKYQRLQKLQPSTSY*ALLPGTAPQKCD*C* 4013
Grapevine rupestris stem pitting associated virus isolate SK704 C, complete genome
Sequence ID: KX274276.1 Length: 8726 Number of Matches: 7
Range 1: 3680 to 4705 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
796.5 bits(1732) | 0.0 | 330/342(96%) | 0/342(0%) | Minus/Plus |
Query 24 PSTNHIFEELCQGGGLNMMYLAETFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIKIDELRKVKRSALDLLSMNGSKITYFPNFERAEKLQGCLLGGLTGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLPTPNTP 1049 PSTNHIFEELCQGGGLNMMYL E FEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIK+DELRKVKRSALDLLSMNGSKITYFPNFERAEKLQGCLLGGLTGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKS+LYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIR+DAFISLAGDPCQSTYDSQKDRAILGAEQSDILR+LEGKTYRYNIESRRFVNPMFE RLPCHFKKGSMTAAFADYAIFHNMHDFLL P Subject 3680 PSTNHIFEELCQGGGLNMMYLTEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPNFERAEKLQGCLLGGLTGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKSYLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRNDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRMLEGKTYRYNIESRRFVNPMFEFRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKGP 4705
Range 2: 3679 to 4704 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
721.4 bits(1568) | 0.0 | 318/342(93%) | 0/342(0%) | Plus/Minus |
Query 25 GVFGVGRRKSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTKRLLSMLYLYVFPXXXXXXXXXXAPKIARSFCESYVLWHGSPASEMKASLRMTSKHRSIYPGGNN*TSSKITQCPAFKPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLGFISAVDIPESQGFASLNFSSLITPVRPPSKHPCNFSARSKFGK*VILDPFIERRSRADRLTFLNSSIFML*GPLPIFSTCLMCSLVISNKAEILPFGLMTSISPFISHLAQISKASKVSAKYIILSPPPWHSSSKMWLVLG 1050 G F + RRKSC+LWKIA*SAKAAVIEPFLK*HGSL+SNIGFT RLLSMLYLYVFPSS LSMSLCSAPKIARSFCESYVLWHGSPASEMKASLRMTS+HRS+YPGGNN*TSSKITQ PAF+PETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYK LFPAPNVPSTTVSSLG ISAVDIPESQGFASLNFSSL+TPVRPPSKHPC+FSARSKFGK*VILDPFIERRSRADRLTFLNSS FML*GPLPIFSTCLMCSLVISNKAEILPFGL+TSISPF+SH AQ+SKASK S KYI+LSPPPWHSSSKMWLVLG Subject 3679 GPFDLARRKSCMLWKIA*SAKAAVIEPFLK*HGSLNSNIGFTNRLLSMLYLYVFPSSILSMSLCSAPKIARSFCESYVLWHGSPASEMKASLRMTSRHRSMYPGGNN*TSSKITQWPAFRPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYK*LFPAPNVPSTTVSSLGLISAVDIPESQGFASLNFSSLMTPVRPPSKHPCSFSARSKFGK*VILDPFIERRSRADRLTFLNSSTFML*GPLPIFSTCLMCSLVISNKAEILPFGLITSISPFMSHFAQMSKASKASVKYIMLSPPPWHSSSKMWLVLG 4704
Range 3: 3679 to 4704 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
667.8 bits(1451) | 0.0 | 286/342(84%) | 0/342(0%) | Minus/Plus |
Query 25 A*HQPHF*GAVPGGRA*YDVLG*DF*GL*YLR*V*YKWGN*GH*PKW*DFRLV*YNQ*AHKAC*EDRQWPSEHKNR*VEEG*AIRP*SSFNEWVQNNLFSKL*AG*KVARVLARGPNWCYK**KVQ*CKTLAFWYINCGYKAKRANCRAWHIWGWKEFLV*EFHEEI*GKICYFCFP*TSLGKFNQK*S*NG*WLQSCQSRQIKEGRVGCSDL*SFP*KSFWFEGWALCDFR*GSVVSPWIYRSVFTCHTQ*CFHFTCW*SMPEHI*FTEGSSNFGS*AE*HTQTA*RKDI*VQHRKQTFCEPNV*I*TAMSLQKRFNDCSLC*LCNLPQYA*LPPTDPKHT 1050 A*H PHF*GAVPG RA*+DVL * F*G *+LR V*+KWGN*G+*PKW*DFRLV*YNQ*AHKAC*ED QWPSEHK+R*+EEG*AIRP*SSFNEWVQ+NLF +L*AG*K ARV ARGP+WC+K**KVQ*CKTLAFWYINCGY AKRANCRAWHIWGWKE LV*+FHEE+* KIC FCFP*TSLGKFNQ+*S*NG*WLQSCQSRQIKEGRVGCS+ * FP*KSFW EGW LCDFR*GSVVSPWI+ S+ CHTQ* FHFTCW*SMPEHI*FT+GS FGS*AE HTQ A*RKD+*VQHRKQT CEPNV*I*T MSLQK NDC LC*LCNLP +A*LPP + K + Subject 3679 A*H*PHF*GAVPGRRA*HDVLD*SF*GF*HLREV*HKWGN*GY*PKW*DFRLV*YNQ*AHKAC*EDWQWPSEHKSR*IEEG*AIRP*SSFNEWVQDNLFPEL*AG*KAARVFARGPDWCHK**KVQ*CKTLAFWYINCGY*AKRANCRAWHIWGWKELLV*KFHEEV*RKICNFCFP*TSLGKFNQE*S*NG*WLQSCQSRQIKEGRVGCSNF*GFP*KSFWSEGWPLCDFR*GSVVSPWIH*SMSACHTQ*RFHFTCW*SMPEHI*FTKGSGYFGS*AERHTQNA*RKDV*VQHRKQTVCEPNV*I*TTMSLQKGLNDCCLC*LCNLP*HA*LPPGEVKRS 4704
Range 4: 3671 to 4690 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
655.4 bits(1424) | 0.0 | 291/340(86%) | 0/340(0%) | Plus/Minus |
Query 39 R*EEVMHIVEDCIISKGCSH*TFFEVTWQSRFKHWVHKTSAFYVVPICLSFKQSEYVTLLSSQNCSXXXXXXXXXXWITSK*NESITAYDK*TQIDISRGKQLNLIENHTMPSLQTRNFSKENFKGHYIPPFLL*FACFGNFAAIIHFKIIFD*ICQGSSRGNKSNKFSLRSLHETLIQETLSSPKCAKHDS*LSWLYIRS*YTRKPGFCITELFITYNTS*AP*QAPLQLFSPLKVWKIGYFGPIH*KKIKGGSLNLPQLIYFYALRAIADLLNMPYVLIGYIKQGGNLTIWVNDLNFPIYITLSANIKGLKSLSQVHHIKPSPLAQLLKNVVGARPTR 1058 R EEVMH++EDCIISKG SH* FEVTW S+FKHWVHK SAFYVVPI LSFK SEYV LLSSQN ILL*IICALAWITSK*NES+ AYDK T I++SRGKQLNLIENHTM SLQTRNFSKEN K +YIPPFLL*FACFGNFAAIIHFKII D*ICQGSSRGNKS KFS R LHET IQ TLSSPKCAKHDS*LSWL IRS*YTRKPGFCITELFITY+TS AP*Q PLQLFSPLKV +IGY GPIH*KKIKGGSLNLPQ IYFYALRAIA+LLNMPYVLIGYIKQGGNLTIWVN+LNFPIY+TL AN+K LKS SQVHH+KPS LAQLLKNVV ARPT+ Subject 3671 RQEEVMHVMEDCIISKGSSH*ALFEVTW*SKFKHWVHKPSAFYVVPIRLSFKHSEYVALLSSQNSPILL*IICALAWITSK*NESVIAYDKQT*INVSRGKQLNLIENHTMASLQTRNFSKENLKSYYIPPFLL*FACFGNFAAIIHFKIILD*ICQGSSRGNKSYKFSFRPLHETFIQVTLSSPKCAKHDS*LSWLNIRS*YTRKPGFCITELFITYDTSQAP*QTPLQLFSPLKVREIGYLGPIH*KKIKGGSLNLPQFIYFYALRAIANLLNMPYVLIGYIKQGGNLTIWVNNLNFPIYVTLRANVKSLKSFSQVHHVKPSSLAQLLKNVVSARPTQ 4690
Range 5: 3675 to 4706 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
636.1 bits(1382) | 0.0 | 294/344(85%) | 0/344(0%) | Minus/Plus |
Query 23 VGLAPTTFLRSCARGEGLI*CTWLRLLRPLIFALSVI*MGKLRSLTQMVRFPPCLI*PMST*GMLRRSAMALRA*K*MS*GRLSDPPLIFFQ*MGPK*PIFQTLSGLKSCKGAC*GA*LVL*VMKSSVMQNPGFLVYQLRI*SQES*LSCLAHLGLERVSCIRVS*RDLRENLLLLFPLDEPWQIQSKMILKWMMAAKLPKQANQRRKGGM**PLKFSLEKFLV*RLGIV*FSMRFSCFPLDISICVYLSYAVMLSFHLLVIHARAHMIHRRIEQFWELSRVTYSDCLKERHIGTT*KADVL*TQCLNLDCHVTSKKVQ*LQPLLIMQSSTICMTSSYRPQTHP 1054 VGLA TTFLRSCAR EGL *CT L+LLR L FA SV *MGKLR LTQMVRFPPCLI*PMST*GMLRR AMALRA*K*M+*GRLSDPPLIFFQ*MGP+*PI +TLSGLKSCKG C*GA*LV *VMKSSVMQNPGFLVYQLRI SQES*LSCLAHLGLERV+CI+VS*R L+ENL LLFPLDEPWQIQS+MILKWMMAAKLPKQANQRRKGGM** L+FSLEKFLV*RL IV*FSMRFSCFPLD I V LSYA+ LSFHLLVIHARAHMIH+RI FWELSR TYS+CLKER IGTT*KAD L*TQCLNLD HVTSK+ Q*L PLLIMQSS CMTSS+R Q P Subject 3675 VGLALTTFLRSCAREEGLT*CT*LKLLRLLTFARSVT*MGKLRLLTQMVRFPPCLI*PMST*GMLRRLAMALRA*K*MN*GRLSDPPLIFFQ*MGPR*PISRTLSGLKSCKGVC*GA*LVS*VMKSSVMQNPGFLVYQLRILSQES*LSCLAHLGLERVTCIKVS*RGLKENL*LLFPLDEPWQIQSRMILKWMMAAKLPKQANQRRKGGM**LLRFSLEKFLV*RLAIV*FSMRFSCFPLDTLIYVCLSYAMTLSFHLLVIHARAHMIHKRIGLFWELSRATYSECLKERRIGTT*KADGL*TQCLNLDYHVTSKRAQ*LLPLLIMQSSITCMTSSWRGQKVP 4706
Range 6: 4065 to 4697 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
408.0 bits(884) | 0.0 | 178/211(84%) | 0/211(0%) | Plus/Minus |
Query 32 LGSVGGSHAYCGRLHNQQRLQSLNLF*SDMAV*IQTLGSQNVCFLCCTYMSFLQAV*VCHSAQLPKLLDPSVNHMCSGMDHQQVK*KHHCV*QVNTDRYIQGETTEPHRKSHNAQPSNQKLF*GKLQRSLHPTLPSLICLLWQLCSHHPFQDHF*LNLPRLV*GKQK*QIFPQISS*NSYTRNSFQPQMCQARQLALLALYPQLIYQKARV 664 L S GGSHA GRLHNQQR QSL+ F*SDM V*IQTLGSQ VCFLCCTY SFLQA *VC SAQLPK DP VNHMCSGMDHQQVK*K HCV*Q + D+ IQGETTEPHRKSHN QPS+QKLF*GK Q+ LHPTLPSLICLLWQLCSHHPFQDH *LNLPRLV*GKQK QIF Q SS*N YT NSFQPQMCQARQLALLA YPQLIYQKARV Subject 4065 LTSPGGSHACYGRLHNQQRQQSLSPF*SDMVV*IQTLGSQTVCFLCCTYTSFLQAF*VCRSAQLPK*PDPFVNHMCSGMDHQQVK*KRHCV*QADIDQCIQGETTEPHRKSHNGQPSDQKLF*GKPQKLLHPTLPSLICLLWQLCSHHPFQDHS*LNLPRLV*GKQKLQIFLQTSS*NFYTSNSFQPQMCQARQLALLA*YPQLIYQKARV 4697
Range 7: 3678 to 4025 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
235.2 bits(507) | 0.0 | 99/116(85%) | 0/116(0%) | Plus/Minus |
Query 704 GPLASTLATFQPAQSLENRLFWTHSLKEDQGRIA*PSSTHLFLCSEGHCRSSQHALCAHWLYQTRRKSYHLG**PQFPHLYHT*RKYQRPQKSQPSTSY*ALPPGTAPQKCGWC*A 1051 GPLA+TLA FQPAQS NRL WTHSLKEDQGRIA*PSS HL LCSEGHC+SSQHALCAHWLYQTRRKSYHLG**PQFPHL HT RK Q+PQK Q STS *AL PGTAPQKCG C*A Subject 3678 GPLANTLAAFQPAQSSGNRLSWTHSLKEDQGRIA*PSSIHLLLCSEGHCQSSQHALCAHWLYQTRRKSYHLG**PQFPHLCHTSRKCQKPQKLQSSTSC*ALLPGTAPQKCG*C*A 4025
Rupestris stem pitting associated virus strain SG1, complete genome
Sequence ID: AY881626.1 Length: 8742 Number of Matches: 7
Range 1: 3679 to 4704 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
795.6 bits(1730) | 0.0 | 332/342(97%) | 0/342(0%) | Minus/Plus |
Query 24 PSTNHIFEELCQGGGLNMMYLAETFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIKIDELRKVKRSALDLLSMNGSKITYFPNFERAEKLQGCLLGGLTGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLPTPNTP 1049 PSTNHIFEELCQGGGLNMMYLAE FEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIK+DELRKVKRSALDLLSMNGSKITYFPNFERAEKLQGCLLGGLTGVISDEKFSDAKPWLSGIS ADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDIL+LLEGKTYRYNIESRRFVNPMFESRLPC FKKGSMTAAFADYAIFHNMHDFLL P Subject 3679 PSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPNFERAEKLQGCLLGGLTGVISDEKFSDAKPWLSGISIADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILKLLEGKTYRYNIESRRFVNPMFESRLPCLFKKGSMTAAFADYAIFHNMHDFLLARSKGP 4704
Range 2: 3678 to 4703 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
719.1 bits(1563) | 0.0 | 324/342(95%) | 0/342(0%) | Plus/Minus |
Query 25 GVFGVGRRKSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTKRLLSMLYLYVFPXXXXXXXXXXAPKIARSFCESYVLWHGSPASEMKASLRMTSKHRSIYPGGNN*TSSKITQCPAFKPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLGFISAVDIPESQGFASLNFSSLITPVRPPSKHPCNFSARSKFGK*VILDPFIERRSRADRLTFLNSSIFML*GPLPIFSTCLMCSLVISNKAEILPFGLMTSISPFISHLAQISKASKVSAKYIILSPPPWHSSSKMWLVLG 1050 G F + RRKSCIL KIA*SAKAAVIEPFLK HGSLDSNIGFTKRLLSMLYL VFPSSSLSMSLCSAP+IARSFCESYVLWHGSPASEMKASLRMTSKHRSIYPGGNN*TSSKITQ PAFKPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLG ISA+DIPESQGFASLNFSSL+TPVRPPSKHPC+FSARSKFGK*VILDPFIERRSRADRLTFLNSS FML*GPLPIFSTCLMCSLVISNKAEILPFGL+TSISPF+SHLAQISKASK SAKYIILSPPPWHSSSKM LVLG Subject 3678 GPFDLARRKSCIL*KIA*SAKAAVIEPFLKRHGSLDSNIGFTKRLLSMLYL*VFPSSSLSMSLCSAPRIARSFCESYVLWHGSPASEMKASLRMTSKHRSIYPGGNN*TSSKITQWPAFKPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLGLISAIDIPESQGFASLNFSSLMTPVRPPSKHPCSFSARSKFGK*VILDPFIERRSRADRLTFLNSSTFML*GPLPIFSTCLMCSLVISNKAEILPFGLITSISPFMSHLAQISKASKASAKYIILSPPPWHSSSKM*LVLG 4703
Range 3: 3678 to 4685 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
665.0 bits(1445) | 0.0 | 286/336(85%) | 0/336(0%) | Minus/Plus |
Query 43 A*HQPHF*GAVPGGRA*YDVLG*DF*GL*YLR*V*YKWGN*GH*PKW*DFRLV*YNQ*AHKAC*EDRQWPSEHKNR*VEEG*AIRP*SSFNEWVQNNLFSKL*AG*KVARVLARGPNWCYK**KVQ*CKTLAFWYINCGYKAKRANCRAWHIWGWKEFLV*EFHEEI*GKICYFCFP*TSLGKFNQK*S*NG*WLQSCQSRQIKEGRVGCSDL*SFP*KSFWFEGWALCDFR*GSVVSPWIYRSVFTCHTQ*CFHFTCW*SMPEHI*FTEGSSNFGS*AE*HTQTA*RKDI*VQHRKQTFCEPNV*I*TAMSLQKRFNDCSLC*LCNLPQYA*LPP 1050 A*H HF*GAVPG RA*YDVLG* F*G *YLR*V*+KWGN*G+*PKW*DFR V*YNQ*AHKAC*EDRQWPSEHK+R*+E+G*AIRP* SF+EWVQNNLFSKL*AG*K A VLARGPNWC+K**KVQ*CKTLAFW IN GY AKRANCRAWH+WGWKEFLV*EFHEE+* KIC C P TSLGKFNQK*S*NG*WLQSC SRQIKEGRVGCSD * FP*KSFWFEGW LC+FR*GSVVSPWIYRS+F CHT *CFHFTC * MPEHI FT+GS N GS*AE*HTQTA*R+D+ VQHRKQTFCEPNV*I*T MSLQK FNDC C*LCN QYA*L P Subject 3678 A*H*SHF*GAVPGWRA*YDVLG*SF*GF*YLR*V*HKWGN*GY*PKW*DFRFV*YNQ*AHKAC*EDRQWPSEHKSR*IEKG*AIRP*PSFDEWVQNNLFSKL*AG*KAAGVLARGPNWCHK**KVQ*CKTLAFWNINRGY*AKRANCRAWHVWGWKEFLV*EFHEEV*RKICNLCLPQTSLGKFNQK*S*NG*WLQSC*SRQIKEGRVGCSDF*GFP*KSFWFEGWPLCNFR*GSVVSPWIYRSMFACHT**CFHFTCR*PMPEHIRFTKGSGNSGS*AE*HTQTA*REDLQVQHRKQTFCEPNV*I*TTMSLQKGFNDCCFC*LCNFSQYA*LSP 4685
Range 4: 3670 to 4683 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
654.0 bits(1421) | 0.0 | 289/338(86%) | 0/338(0%) | Plus/Minus |
Query 45 EEVMHIVEDCIISKGCSH*TFFEVTWQSRFKHWVHKTSAFYVVPICLSFKQSEYVTLLSSQNCSXXXXXXXXXXWITSK*NESITAYDK*TQIDISRGKQLNLIENHTMPSLQTRNFSKENFKGHYIPPFLL*FACFGNFAAIIHFKIIFD*ICQGSSRGNKSNKFSLRSLHETLIQETLSSPKCAKHDS*LSWLYIRS*YTRKPGFCITELFITYNTS*AP*QAPLQLFSPLKVWKIGYFGPIH*KKIKGGSLNLPQLIYFYALRAIADLLNMPYVLIGYIKQGGNLTIWVNDLNFPIYITLSANIKGLKSLSQVHHIKPSPLAQLLKNVVGARPTR 1058 E+VMHIV++CIISK SH*T FE TW SRFKHWVHKTSAFYVVP+ L FKQ EYVTLLSSQNC ILL*I+CALAW+T K*NESIT YDK T IDISRGKQLNLIEN+TM SLQTRNFSKEN K HYIPPFLL*FACF NFAAIIHFKIIFD*ICQGSS G+K KFS R LHETLIQETLSSPK AKHDS*LSWL IR *Y+RKP FCITELFITY+TS*AP*QAPLQLFSPLKVWKIGYFGPIH KK+KGGSLNL Q IYFYALRAIADLLNMPYVLIGYIKQ GNLTIWVN+LNFPIY+TLSANIK LKS SQVHHIKPS LAQLLKNV+ ARPT+ Subject 3670 EKVMHIVKNCIISKSSSH*TLFEETW*SRFKHWVHKTSAFYVVPVSLPFKQFEYVTLLSSQNCPILL*IVCALAWVTGK*NESITTYDKQT*IDISRGKQLNLIENYTMASLQTRNFSKENLKSHYIPPFLL*FACFSNFAAIIHFKIIFD*ICQGSSGGDKGYKFSFRPLHETLIQETLSSPKRAKHDS*LSWLNIRD*YSRKPRFCITELFITYDTS*AP*QAPLQLFSPLKVWKIGYFGPIHRKKVKGGSLNLSQFIYFYALRAIADLLNMPYVLIGYIKQSGNLTIWVNNLNFPIYVTLSANIKSLKSFSQVHHIKPSTLAQLLKNVISARPTQ 4683
Range 5: 4064 to 4684 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
397.9 bits(862) | 0.0 | 171/207(83%) | 0/207(0%) | Plus/Minus |
Query 44 GGSHAYCGRLHNQQRLQSLNLF*SDMAV*IQTLGSQNVCFLCCTYMSFLQAV*VCHSAQLPKLLDPSVNHMCSGMDHQQVK*KHHCV*QVNTDRYIQGETTEPHRKSHNAQPSNQKLF*GKLQRSLHPTLPSLICLLWQLCSHHPFQDHF*LNLPRLV*GKQK*QIFPQISS*NSYTRNSFQPQMCQARQLALLALYPQLIYQKARV 664 G SHAYC +LHNQQ+ QSLN F* DM V*IQTLGSQNVCFLCCT S LQAV*VCHSAQLP+L DP VN MCSGM H+QVK*KHH V*Q N DRYIQGETTEPHRK HN QPSNQKLF*GK Q+SLHPTLPSLICLL QLCSHHPFQDHF*LNLPRLV G+Q+ QIF Q SS*NSYTRNSFQPQ CQARQLALLA YP+LI+QKA+V Subject 4064 GESHAYCEKLHNQQKQQSLNPF*RDMVV*IQTLGSQNVCFLCCTCKSSLQAV*VCHSAQLPELPDPFVNRMCSGMGHRQVK*KHHYV*QANIDRYIQGETTEPHRKLHNGQPSNQKLF*GKPQKSLHPTLPSLICLL*QLCSHHPFQDHF*LNLPRLVWGRQRLQIFLQTSS*NSYTRNSFQPQTCQARQLALLA*YPRLIFQKAKV 4684
Range 6: 3677 to 4024 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
246.2 bits(531) | 0.0 | 102/116(88%) | 0/116(0%) | Plus/Minus |
Query 704 GPLASTLATFQPAQSLENRLFWTHSLKEDQGRIA*PSSTHLFLCSEGHCRSSQHALCAHWLYQTRRKSYHLG**PQFPHLYHT*RKYQRPQKSQPSTSY*ALPPGTAPQKCGWC*A 1051 GPLAST A FQPAQSLENRLFWTHS KE QGRIA*P S HL LCSEGHCRSSQHALCAHWLYQT+RKSYHLG**PQFPHL HT*RKYQ+PQK QPSTSY*AL PGTAPQKC C*A Subject 3677 GPLASTPAAFQPAQSLENRLFWTHSSKEGQGRIA*PFSIHLLLCSEGHCRSSQHALCAHWLYQTKRKSYHLG**PQFPHLCHT*RKYQKPQKLQPSTSY*ALHPGTAPQKCD*C*A 4024
Range 7: 3674 to 4705 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
609.1 bits(1323) | 0.0 | 289/344(84%) | 0/344(0%) | Minus/Plus |
Query 23 VGLAPTTFLRSCARGEGLI*CTWLRLLRPLIFALSVI*MGKLRSLTQMVRFPPCLI*PMST*GMLRRSAMALRA*K*MS*GRLSDPPLIFFQ*MGPK*PIFQTLSGLKSCKGAC*GA*LVL*VMKSSVMQNPGFLVYQLRI*SQES*LSCLAHLGLERVSCIRVS*RDLRENLLLLFPLDEPWQIQSKMILKWMMAAKLPKQANQRRKGGM**PLKFSLEKFLV*RLGIV*FSMRFSCFPLDISICVYLSYAVMLSFHLLVIHARAHMIHRRIEQFWELSRVTYSDCLKERHIGTT*KADVL*TQCLNLDCHVTSKKVQ*LQPLLIMQSSTICMTSSYRPQTHP 1054 VGLA TFLRSCAR EGLI*CTWL+LLR LIFALSV *MGKLR LTQMVRFP CLI*PMST*GMLRRSAMALRA*K*M+* RLSDPPL FF+*MGPK*PIFQTLSGLKSC+GAC*GA*LV *VMKSSVMQN GFL YQ RI SQES*LSCLA LGLERVSCIRVS*R L+ENL L P DEPWQIQSKMILKWMMAAKL KQANQRRKGGM** L+FSLEKFLV*RL IV*FSMRFSCFPLDISI V LSY VMLSFHL V HARAH IH+RI QFWELSRVTYS+CLK R GTT*KADVL*TQCLNLD HV+SK+VQ*L LLIMQ TICMT S++ + P Subject 3674 VGLALITFLRSCARVEGLI*CTWLKLLRLLIFALSVT*MGKLRLLTQMVRFPLCLI*PMST*GMLRRSAMALRA*K*MN*ERLSDPPLTFFR*MGPK*PIFQTLSGLKSCRGAC*GA*LVS*VMKSSVMQNLGFLEYQSRILSQES*LSCLARLGLERVSCIRVS*RGLKENL*PLSPPDEPWQIQSKMILKWMMAAKLLKQANQRRKGGM**LLRFSLEKFLV*RLAIV*FSMRFSCFPLDISIYVCLSYVVMLSFHLPVTHARAHTIHKRIGQFWELSRVTYSNCLKGRLTGTT*KADVL*TQCLNLDYHVSSKRVQ*LLLLLIMQFFTICMTFSWQGRKVP 4705
Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome
Sequence ID: JX559646.1 Length: 8726 Number of Matches: 7
Range 1: 3679 to 4704 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
795.6 bits(1730) | 0.0 | 332/342(97%) | 0/342(0%) | Minus/Plus |
Query 24 PSTNHIFEELCQGGGLNMMYLAETFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIKIDELRKVKRSALDLLSMNGSKITYFPNFERAEKLQGCLLGGLTGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLPTPNTP 1049 PSTNHIFEELCQGGGLNMMYLAE FEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIK+DELRKVKRSALDLLSMNGSKITYFPNFERAEKLQGCLLGGLTGVISDEKFSDAKPWLSGIS ADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDIL+LLEGKTYRYNIESRRFVNPMFESRLPC FKKGSMTAAFADYAIFHNMHDFLL P Subject 3679 PSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPNFERAEKLQGCLLGGLTGVISDEKFSDAKPWLSGISIADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILKLLEGKTYRYNIESRRFVNPMFESRLPCLFKKGSMTAAFADYAIFHNMHDFLLARSKGP 4704
Range 2: 3678 to 4703 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
721.4 bits(1568) | 0.0 | 324/342(95%) | 0/342(0%) | Plus/Minus |
Query 25 GVFGVGRRKSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTKRLLSMLYLYVFPXXXXXXXXXXAPKIARSFCESYVLWHGSPASEMKASLRMTSKHRSIYPGGNN*TSSKITQCPAFKPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLGFISAVDIPESQGFASLNFSSLITPVRPPSKHPCNFSARSKFGK*VILDPFIERRSRADRLTFLNSSIFML*GPLPIFSTCLMCSLVISNKAEILPFGLMTSISPFISHLAQISKASKVSAKYIILSPPPWHSSSKMWLVLG 1050 G F + RRKSCIL KIA*SAKAAVIEPFLK HGSLDSNIGFTKRLLSMLYLYV PSSSLSMSLCSAP+IARSFCESYVLWHGSPASEMKASLRMTSKHRSIYPGGNN*TSSKITQ PAFKPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLG ISA+DIPESQGFASLNFSSL+TPVRPPSKHPC+FSARSKFGK*VILDPFIERRSRADRLTFLNSS FML*GPLPIFSTCLMCSLVISN+AEILPFGL+TSISPFISHLAQISKASK SAKYIILSPPPWHSSSKM LVLG Subject 3678 GPFDLARRKSCIL*KIA*SAKAAVIEPFLKRHGSLDSNIGFTKRLLSMLYLYVLPSSSLSMSLCSAPRIARSFCESYVLWHGSPASEMKASLRMTSKHRSIYPGGNN*TSSKITQWPAFKPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLGLISAIDIPESQGFASLNFSSLMTPVRPPSKHPCSFSARSKFGK*VILDPFIERRSRADRLTFLNSSTFML*GPLPIFSTCLMCSLVISNRAEILPFGLITSISPFISHLAQISKASKASAKYIILSPPPWHSSSKM*LVLG 4703
Range 3: 3678 to 4685 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
671.9 bits(1460) | 0.0 | 289/336(86%) | 0/336(0%) | Minus/Plus |
Query 43 A*HQPHF*GAVPGGRA*YDVLG*DF*GL*YLR*V*YKWGN*GH*PKW*DFRLV*YNQ*AHKAC*EDRQWPSEHKNR*VEEG*AIRP*SSFNEWVQNNLFSKL*AG*KVARVLARGPNWCYK**KVQ*CKTLAFWYINCGYKAKRANCRAWHIWGWKEFLV*EFHEEI*GKICYFCFP*TSLGKFNQK*S*NG*WLQSCQSRQIKEGRVGCSDL*SFP*KSFWFEGWALCDFR*GSVVSPWIYRSVFTCHTQ*CFHFTCW*SMPEHI*FTEGSSNFGS*AE*HTQTA*RKDI*VQHRKQTFCEPNV*I*TAMSLQKRFNDCSLC*LCNLPQYA*LPP 1050 A*H HF*GAVPG RA*YDVLG* F*G *YLR*V*YKWGN*G+*PKW*DFR V*YNQ*AHKAC*EDRQWPSEHK+R*+E+G*AIRP* SFNEWVQNNLFSKL*AG*K A VLARGPNWC+K**KVQ*CKTLAFW IN GY AKRANCRAWH+WGWKEFLV*EFHEE+* KIC C P TSLGKFNQK*S*NG*WLQSC SRQIKEGRVGCSD * FP*KSFWFEGW LC+FR*GSVVSPWIYRS+F CHT *CFHFTC *SMPEHI FT+GS N GS*AE*HTQT *R+D+*VQHRKQTFCEPNV*I*T MSLQK FNDC C*LCN QYA*L P Subject 3678 A*H*SHF*GAVPGWRA*YDVLG*SF*GF*YLR*V*YKWGN*GY*PKW*DFRSV*YNQ*AHKAC*EDRQWPSEHKSR*IEKG*AIRP*PSFNEWVQNNLFSKL*AG*KAAGVLARGPNWCHK**KVQ*CKTLAFWNINRGY*AKRANCRAWHVWGWKEFLV*EFHEEV*RKICNLCLPQTSLGKFNQK*S*NG*WLQSC*SRQIKEGRVGCSDF*GFP*KSFWFEGWPLCNFR*GSVVSPWIYRSMFACHT**CFHFTCR*SMPEHIRFTKGSGNSGS*AE*HTQTT*RQDV*VQHRKQTFCEPNV*I*TTMSLQKGFNDCCFC*LCNFSQYA*LSP 4685
Range 4: 3670 to 4683 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
649.0 bits(1410) | 0.0 | 291/338(86%) | 0/338(0%) | Plus/Minus |
Query 45 EEVMHIVEDCIISKGCSH*TFFEVTWQSRFKHWVHKTSAFYVVPICLSFKQSEYVTLLSSQNCSXXXXXXXXXXWITSK*NESITAYDK*TQIDISRGKQLNLIENHTMPSLQTRNFSKENFKGHYIPPFLL*FACFGNFAAIIHFKIIFD*ICQGSSRGNKSNKFSLRSLHETLIQETLSSPKCAKHDS*LSWLYIRS*YTRKPGFCITELFITYNTS*AP*QAPLQLFSPLKVWKIGYFGPIH*KKIKGGSLNLPQLIYFYALRAIADLLNMPYVLIGYIKQGGNLTIWVNDLNFPIYITLSANIKGLKSLSQVHHIKPSPLAQLLKNVVGARPTR 1058 E+VMHIV++CIISK SH*T FE TW SRFKHWVHKTSAFYVVPI L+FK EYVTLLSSQNC ILL*I+CALAWIT K*NESIT YDK T IDISRGKQLNLIEN+TM SLQTRNFSKEN K HYIPPFLL*FACF NFAAIIHFKIIFD*ICQGSS G+K KFS R LHETLIQETLSSPK AKHDS*LSWL IR *Y+RKP FCITELFITY+TS*AP*QAPLQLFSPLKVWKIGYFGPIH*KK+KGGSLNL Q IYFYALRAIADLLNMPYVLIGYIKQ GNLTIWVN+LNFPIYITLSANIK LKS SQVHHIKPS LAQLLKNV+ AR T+ Subject 3670 EKVMHIVKNCIISKSSSH*TLFEETW*SRFKHWVHKTSAFYVVPIRLAFK*FEYVTLLSSQNCPILL*IVCALAWITGK*NESITTYDKQT*IDISRGKQLNLIENYTMASLQTRNFSKENLKSHYIPPFLL*FACFSNFAAIIHFKIIFD*ICQGSSGGDKGYKFSFRPLHETLIQETLSSPKRAKHDS*LSWLNIRD*YSRKPRFCITELFITYDTS*AP*QAPLQLFSPLKVWKIGYFGPIH*KKVKGGSLNLSQFIYFYALRAIADLLNMPYVLIGYIKQSGNLTIWVNNLNFPIYITLSANIKSLKSFSQVHHIKPSTLAQLLKNVISARLTQ 4683
Range 5: 4064 to 4684 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
403.4 bits(874) | 0.0 | 172/207(83%) | 0/207(0%) | Plus/Minus |
Query 44 GGSHAYCGRLHNQQRLQSLNLF*SDMAV*IQTLGSQNVCFLCCTYMSFLQAV*VCHSAQLPKLLDPSVNHMCSGMDHQQVK*KHHCV*QVNTDRYIQGETTEPHRKSHNAQPSNQKLF*GKLQRSLHPTLPSLICLLWQLCSHHPFQDHF*LNLPRLV*GKQK*QIFPQISS*NSYTRNSFQPQMCQARQLALLALYPQLIYQKARV 664 G SHAYC +LHNQQ+ QSLN F* DM V*IQTLGSQNVCFLCCTY S LQ V*VCHSAQLP+L DP VN MCSGMDH+QVK*KHH V*Q N DRYIQGETTEPHRK HN QPSNQKLF*GK Q+SLHPTLPSLICLL QLCSHHPFQDHF*LNLPRLV G+Q+ QIF Q SS*NSYTRNSFQPQ CQARQLALLA YP+LI+QKA+V Subject 4064 GESHAYCEKLHNQQKQQSLNPF*RDMVV*IQTLGSQNVCFLCCTYTSCLQVV*VCHSAQLPELPDPFVNRMCSGMDHRQVK*KHHYV*QANIDRYIQGETTEPHRKLHNGQPSNQKLF*GKPQKSLHPTLPSLICLL*QLCSHHPFQDHF*LNLPRLVWGRQRLQIFLQTSS*NSYTRNSFQPQTCQARQLALLA*YPRLIFQKAKV 4684
Range 6: 3677 to 4024 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
252.2 bits(544) | 0.0 | 104/116(90%) | 0/116(0%) | Plus/Minus |
Query 704 GPLASTLATFQPAQSLENRLFWTHSLKEDQGRIA*PSSTHLFLCSEGHCRSSQHALCAHWLYQTRRKSYHLG**PQFPHLYHT*RKYQRPQKSQPSTSY*ALPPGTAPQKCGWC*A 1051 GPLAST A FQPAQSLENRLFWTHSLKE QGRIA*P S HL LCSEGHCRSSQHALCAHWLYQT RKSYHLG**PQFPHLYHT*RKYQ+PQK QPSTSY*AL PGTAPQKC C*A Subject 3677 GPLASTPAAFQPAQSLENRLFWTHSLKEGQGRIA*PFSIHLLLCSEGHCRSSQHALCAHWLYQTERKSYHLG**PQFPHLYHT*RKYQKPQKLQPSTSY*ALHPGTAPQKCD*C*A 4024
Range 7: 3674 to 4705 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
611.9 bits(1329) | 0.0 | 291/344(85%) | 0/344(0%) | Minus/Plus |
Query 23 VGLAPTTFLRSCARGEGLI*CTWLRLLRPLIFALSVI*MGKLRSLTQMVRFPPCLI*PMST*GMLRRSAMALRA*K*MS*GRLSDPPLIFFQ*MGPK*PIFQTLSGLKSCKGAC*GA*LVL*VMKSSVMQNPGFLVYQLRI*SQES*LSCLAHLGLERVSCIRVS*RDLRENLLLLFPLDEPWQIQSKMILKWMMAAKLPKQANQRRKGGM**PLKFSLEKFLV*RLGIV*FSMRFSCFPLDISICVYLSYAVMLSFHLLVIHARAHMIHRRIEQFWELSRVTYSDCLKERHIGTT*KADVL*TQCLNLDCHVTSKKVQ*LQPLLIMQSSTICMTSSYRPQTHP 1054 V LA TFLRSCAR EGLI*CTWL+LLR LIFALSVI*MGKLR LTQMVRFP CLI*PMST*GMLRRSAMALRA*K*M+* RLSDPPL FFQ*MGPK*PIFQTLSGLKSC+GAC*GA*LV *VMKSSVMQN GFL YQ RI SQES*LSCLA LGLERVSCIRVS*R L+ENL L P DEPWQIQSKMILKWMMAAKL KQANQRRKGGM** L+FSLEKFLV*RL IV*FSMRFSCFPLDISI V LSY VMLSFHL VIHARAH IH+RI QFWELSRVTYS+ LK R IGTT*KADVL*TQCLNLD HV+SK+VQ*L LLIMQ TICMT S++ + P Subject 3674 VSLALITFLRSCARVEGLI*CTWLKLLRLLIFALSVI*MGKLRLLTQMVRFPLCLI*PMST*GMLRRSAMALRA*K*MN*ERLSDPPLTFFQ*MGPK*PIFQTLSGLKSCRGAC*GA*LVS*VMKSSVMQNLGFLEYQSRILSQES*LSCLARLGLERVSCIRVS*RGLKENL*PLSPPDEPWQIQSKMILKWMMAAKLLKQANQRRKGGM**LLRFSLEKFLV*RLAIV*FSMRFSCFPLDISIYVCLSYVVMLSFHLPVIHARAHTIHKRIGQFWELSRVTYSNYLKARRIGTT*KADVL*TQCLNLDYHVSSKRVQ*LLLLLIMQFFTICMTFSWQGRKVP 4705
Grapevine rupestris stem pitting associated virus isolate GRSPaV WA, complete genome
Sequence ID: KC427107.1 Length: 8742 Number of Matches: 7
Range 1: 3679 to 4704 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
793.3 bits(1725) | 0.0 | 331/342(97%) | 0/342(0%) | Minus/Plus |
Query 24 PSTNHIFEELCQGGGLNMMYLAETFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIKIDELRKVKRSALDLLSMNGSKITYFPNFERAEKLQGCLLGGLTGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLPTPNTP 1049 PSTNHIFEELCQGGGLNMMYLAE FEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIK+DELRKVKRSALDLLSMNGSKITYFP+FERAEKLQGCLLGGLTGVISDEKFSDAKPWLSGIS ADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDIL+LLEGKTYRYNIESRRFVNPMFESRLPC FKKGSMTAAFADYAIFHNMHDFLL P Subject 3679 PSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFSDAKPWLSGISIADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILKLLEGKTYRYNIESRRFVNPMFESRLPCLFKKGSMTAAFADYAIFHNMHDFLLARSKGP 4704
Range 2: 3678 to 4703 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
716.3 bits(1557) | 0.0 | 323/342(94%) | 0/342(0%) | Plus/Minus |
Query 25 GVFGVGRRKSCILWKIA*SAKAAVIEPFLK*HGSLDSNIGFTKRLLSMLYLYVFPXXXXXXXXXXAPKIARSFCESYVLWHGSPASEMKASLRMTSKHRSIYPGGNN*TSSKITQCPAFKPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLGFISAVDIPESQGFASLNFSSLITPVRPPSKHPCNFSARSKFGK*VILDPFIERRSRADRLTFLNSSIFML*GPLPIFSTCLMCSLVISNKAEILPFGLMTSISPFISHLAQISKASKVSAKYIILSPPPWHSSSKMWLVLG 1050 G F + RRKSCIL KIA*SAKAAVIEPFLK HGSLDSNIGFTKRLLSMLYL VFPSSSLSMSLCSAP+IARSFCESYVLWHGSPASEMKASLRMTSKHRSIYPGGNN*TSSKITQ PAFKPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLG ISA+DIPESQGFASLNFSSL+TPVRPPSKHPC+FSARSK GK*VILDPFIERRSRADRLTFLNSS FML*GPLPIFSTCLMCSLVISNKAEILPFGL+TSISPF+SHLAQISKASK SAKYIILSPPPWHSSSKM LVLG Subject 3678 GPFDLARRKSCIL*KIA*SAKAAVIEPFLKRHGSLDSNIGFTKRLLSMLYL*VFPSSSLSMSLCSAPRIARSFCESYVLWHGSPASEMKASLRMTSKHRSIYPGGNN*TSSKITQWPAFKPETFLRKTSKVTTSHPSFFDLPALATLQPSSISRSFLIEFAKARLGETKVTNFPSDLFMKLLYKKLFPAPNVPSTTVSSLGLISAIDIPESQGFASLNFSSLMTPVRPPSKHPCSFSARSKLGK*VILDPFIERRSRADRLTFLNSSTFML*GPLPIFSTCLMCSLVISNKAEILPFGLITSISPFMSHLAQISKASKASAKYIILSPPPWHSSSKM*LVLG 4703
Range 3: 3678 to 4685 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
667.3 bits(1450) | 0.0 | 287/336(85%) | 0/336(0%) | Minus/Plus |
Query 43 A*HQPHF*GAVPGGRA*YDVLG*DF*GL*YLR*V*YKWGN*GH*PKW*DFRLV*YNQ*AHKAC*EDRQWPSEHKNR*VEEG*AIRP*SSFNEWVQNNLFSKL*AG*KVARVLARGPNWCYK**KVQ*CKTLAFWYINCGYKAKRANCRAWHIWGWKEFLV*EFHEEI*GKICYFCFP*TSLGKFNQK*S*NG*WLQSCQSRQIKEGRVGCSDL*SFP*KSFWFEGWALCDFR*GSVVSPWIYRSVFTCHTQ*CFHFTCW*SMPEHI*FTEGSSNFGS*AE*HTQTA*RKDI*VQHRKQTFCEPNV*I*TAMSLQKRFNDCSLC*LCNLPQYA*LPP 1050 A*H HF*GAVPG RA*YDVLG* F*G *YLR*V*+KWGN*G+*PKW*DFR V*YNQ*AHKAC*EDRQWPSEHK+R*+E+G*AIRP* SF+EWVQNNLFSKL*AG*K A VLARGPNWC+K**KVQ*CKTLAFW IN GY AKRANCRAWH+WGWKEFLV*EFHEE+* KIC C P TSLGKFNQK*S*NG*WLQSC SRQIKEGRVGCSD * FP*KSFWFEGW LCDFR*GSVVSPWIYRS+F CHT *CFHFTC * MPEHI FT+GS N GS*AE*HTQTA*R+D+ VQHRKQTFCEPNV*I*T MSLQK FNDC C*LCN QYA*L P Subject 3678 A*H*SHF*GAVPGWRA*YDVLG*SF*GF*YLR*V*HKWGN*GY*PKW*DFRFV*YNQ*AHKAC*EDRQWPSEHKSR*IEKG*AIRP*PSFDEWVQNNLFSKL*AG*KAAGVLARGPNWCHK**KVQ*CKTLAFWNINRGY*AKRANCRAWHVWGWKEFLV*EFHEEV*RKICNLCLPQTSLGKFNQK*S*NG*WLQSC*SRQIKEGRVGCSDF*GFP*KSFWFEGWPLCDFR*GSVVSPWIYRSMFACHT**CFHFTCR*PMPEHIRFTKGSGNSGS*AE*HTQTA*REDLQVQHRKQTFCEPNV*I*TTMSLQKGFNDCCFC*LCNFSQYA*LSP 4685
Range 4: 3670 to 4683 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
654.9 bits(1423) | 0.0 | 289/338(86%) | 0/338(0%) | Plus/Minus |
Query 45 EEVMHIVEDCIISKGCSH*TFFEVTWQSRFKHWVHKTSAFYVVPICLSFKQSEYVTLLSSQNCSXXXXXXXXXXWITSK*NESITAYDK*TQIDISRGKQLNLIENHTMPSLQTRNFSKENFKGHYIPPFLL*FACFGNFAAIIHFKIIFD*ICQGSSRGNKSNKFSLRSLHETLIQETLSSPKCAKHDS*LSWLYIRS*YTRKPGFCITELFITYNTS*AP*QAPLQLFSPLKVWKIGYFGPIH*KKIKGGSLNLPQLIYFYALRAIADLLNMPYVLIGYIKQGGNLTIWVNDLNFPIYITLSANIKGLKSLSQVHHIKPSPLAQLLKNVVGARPTR 1058 E+VMHIV++CIISK SH*T FE TW SRFKHWVHKTSAFYVVP+ L FKQ EYVTLLSSQNC ILL*I+CALAW+T K*NESIT YDK T IDISRGKQLNLIENHTM SLQTRNFSKEN K HYIPPFLL*FACF NFAAIIHFKIIFD*ICQGSS G+K KFS R LHETLIQETLSSPK AKHDS*LSWL IR *Y+RKP FCITELFITY+TS*AP*QAPLQLFSPLK WKIGYFGPIH KK+KGGSLNL Q IYFYALRAIADLLNMPYVLIGYIKQ GNLTIWVN+LNFPIY+TLSANIK LKS SQVHHIKPS LAQLLKNV+ ARPT+ Subject 3670 EKVMHIVKNCIISKSSSH*TLFEETW*SRFKHWVHKTSAFYVVPVSLPFKQFEYVTLLSSQNCPILL*IVCALAWVTGK*NESITTYDKQT*IDISRGKQLNLIENHTMASLQTRNFSKENLKSHYIPPFLL*FACFSNFAAIIHFKIIFD*ICQGSSGGDKGYKFSFRPLHETLIQETLSSPKRAKHDS*LSWLNIRD*YSRKPRFCITELFITYDTS*AP*QAPLQLFSPLKAWKIGYFGPIHRKKVKGGSLNLSQFIYFYALRAIADLLNMPYVLIGYIKQSGNLTIWVNNLNFPIYVTLSANIKSLKSFSQVHHIKPSTLAQLLKNVISARPTQ 4683
Range 5: 4064 to 4684 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
400.6 bits(868) | 0.0 | 172/207(83%) | 0/207(0%) | Plus/Minus |
Query 44 GGSHAYCGRLHNQQRLQSLNLF*SDMAV*IQTLGSQNVCFLCCTYMSFLQAV*VCHSAQLPKLLDPSVNHMCSGMDHQQVK*KHHCV*QVNTDRYIQGETTEPHRKSHNAQPSNQKLF*GKLQRSLHPTLPSLICLLWQLCSHHPFQDHF*LNLPRLV*GKQK*QIFPQISS*NSYTRNSFQPQMCQARQLALLALYPQLIYQKARV 664 G SHAYC +LHNQQ+ QSLN F* DM V*IQTLGSQNVCFLCCT S LQAV*VCHSAQLP+L DP VN MCSGM H+QVK*KHH V*Q N DRYIQGETTEPHRKSHN QPSNQKLF*GK Q+SLHPTLPSLICLL QLCSHHPFQDHF*LNLPRLV G+Q+ QIF Q SS*NSYTRNSFQPQ CQARQLALLA YP+LI+QKA+V Subject 4064 GESHAYCEKLHNQQKQQSLNPF*RDMVV*IQTLGSQNVCFLCCTCKSSLQAV*VCHSAQLPELPDPFVNRMCSGMGHRQVK*KHHYV*QANIDRYIQGETTEPHRKSHNGQPSNQKLF*GKPQKSLHPTLPSLICLL*QLCSHHPFQDHF*LNLPRLVWGRQRLQIFLQTSS*NSYTRNSFQPQTCQARQLALLA*YPRLIFQKAKV 4684
Range 6: 3677 to 4024 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
246.2 bits(531) | 0.0 | 102/116(88%) | 0/116(0%) | Plus/Minus |
Query 704 GPLASTLATFQPAQSLENRLFWTHSLKEDQGRIA*PSSTHLFLCSEGHCRSSQHALCAHWLYQTRRKSYHLG**PQFPHLYHT*RKYQRPQKSQPSTSY*ALPPGTAPQKCGWC*A 1051 GPLAST A FQPAQSLENRLFWTHS KE QGRIA*P S HL LCSEGHCRSSQHALCAHWLYQT+RKSYHLG**PQFPHL HT*RKYQ+PQK QPSTSY*AL PGTAPQKC C*A Subject 3677 GPLASTPAAFQPAQSLENRLFWTHSSKEGQGRIA*PFSIHLLLCSEGHCRSSQHALCAHWLYQTKRKSYHLG**PQFPHLCHT*RKYQKPQKLQPSTSY*ALHPGTAPQKCD*C*A 4024
Range 7: 3674 to 4705 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
606.8 bits(1318) | 0.0 | 288/344(84%) | 0/344(0%) | Minus/Plus |
Query 23 VGLAPTTFLRSCARGEGLI*CTWLRLLRPLIFALSVI*MGKLRSLTQMVRFPPCLI*PMST*GMLRRSAMALRA*K*MS*GRLSDPPLIFFQ*MGPK*PIFQTLSGLKSCKGAC*GA*LVL*VMKSSVMQNPGFLVYQLRI*SQES*LSCLAHLGLERVSCIRVS*RDLRENLLLLFPLDEPWQIQSKMILKWMMAAKLPKQANQRRKGGM**PLKFSLEKFLV*RLGIV*FSMRFSCFPLDISICVYLSYAVMLSFHLLVIHARAHMIHRRIEQFWELSRVTYSDCLKERHIGTT*KADVL*TQCLNLDCHVTSKKVQ*LQPLLIMQSSTICMTSSYRPQTHP 1054 VGLA TFLRSCAR EGLI*CTWL+LLR LIFALSV *MGKLR LTQMVRFP CLI*PMST*GMLRRSAMALRA*K*M+* RLSDPPL FF+*MGPK*PIFQ LSGLKSC+GAC*GA*LV *VMKSSVMQN GFL YQ RI SQES*LSCLA LGLERVSCIRVS*R L+ENL L P DEPWQIQSKMILKWMMAAKL KQANQRRKGGM** L+FSLEKFLV*RL IV*FSMRFSCFPLDISI V LSY VMLSFHL V HARAH IH+RI QFWELSRVTYS+CLK R GTT*KADVL*TQCLNLD HV+SK+VQ*L LLIMQ TICMT S++ + P Subject 3674 VGLALITFLRSCARVEGLI*CTWLKLLRLLIFALSVT*MGKLRLLTQMVRFPLCLI*PMST*GMLRRSAMALRA*K*MN*ERLSDPPLTFFR*MGPK*PIFQALSGLKSCRGAC*GA*LVS*VMKSSVMQNLGFLEYQSRILSQES*LSCLARLGLERVSCIRVS*RGLKENL*PLSPPDEPWQIQSKMILKWMMAAKLLKQANQRRKGGM**LLRFSLEKFLV*RLAIV*FSMRFSCFPLDISIYVCLSYVVMLSFHLPVTHARAHTIHKRIGQFWELSRVTYSNCLKGRLTGTT*KADVL*TQCLNLDYHVSSKRVQ*LLLLLIMQFFTICMTFSWQGRKVP 4705
Nucleotide Sequence (546 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
415.7 | 2104.4 | 39% | 2.255e-114 | 81% | AB277784.1 | |
412.5 | 2119.5 | 39% | 2.083e-113 | 83% | FR691076.1 | |
412.5 | 1988.0 | 38% | 2.083e-113 | 85% | KX274276.1 | |
407.0 | 1917.9 | 38% | 9.416e-112 | 74% | JX559646.1 | |
405.7 | 1870.7 | 38% | 2.442e-111 | 74% | KX925556.1 |
Alignments
Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OE8
Sequence ID: AB277784.1 Length: 2876 Number of Matches: 8
Range 1: 503 to 1024 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
415.7 bits(901) | 0.0 | 173/174(99%) | 0/174(0%) | Minus/Plus |
Query 24 KVQFVSNPTFCGWCLFKEGTFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGR 545 KVQFVSNPTFCGWCLFKEG FKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGR Subject 503 KVQFVSNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGR 1024
Range 2: 504 to 1025 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
382.8 bits(829) | 0.0 | 161/174(93%) | 0/174(0%) | Plus/Minus |
Query 23 SSP*D*DCLEHLQ*KPQNSRPLRLTPLLNYSYHYQAHYV*QLET*AH*KHL*TRRLIML*LNYS*YSNNAKYLRPNQPLQTGLKLNTSFYACS*PGTSHNCSVPPPPLLSSFQLIAHPIYMHRTPLSHNCQYSSPNCPSLWLCIFAPKLVEVS*RFPP*TSTIHRMWG*KQTEP 544 +S * *DCLEH *KP+NSRPLRLTPLLNYSYHYQAHYV*QLE * H*KHL*TRRLIML*LNYS*YSNNAKYLRPNQPLQTGLKL+TS YACS*PGTSHNCSVPPPPLLSSFQLIAHPIYMHRTPLSHNCQY+SP+CPSLWLCIFAPKLVEVS* FPP*TSTIHRMWG*KQTEP Subject 504 TSL*G*DCLEHPL*KPRNSRPLRLTPLLNYSYHYQAHYV*QLEI*VH*KHL*TRRLIML*LNYS*YSNNAKYLRPNQPLQTGLKLSTSSYACS*PGTSHNCSVPPPPLLSSFQLIAHPIYMHRTPLSHNCQYNSPDCPSLWLCIFAPKLVEVS*IFPP*TSTIHRMWG*KQTEP 1025
Range 3: 502 to 1023 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
344.7 bits(746) | 0.0 | 163/174(94%) | 0/174(0%) | Minus/Plus |
Query 25 QGSVCF*PHILWMVLV*GGNLQETSTNLGANMHSQRDGQFGELY*QLCDRGVLCI*IG*AIXXXXXXXXXXGTLQLCEVPG*EQA*NEVFNFRPV*SG*LGLKYLALFEYYE*FS*SIISLRVYRCFQCAQVSSCYT*CAW*W*E*FNKGVNLRGREFCGFHCRCSRQS*SHGE 546 QGSVCF*PHILWMVLV*GGN+QETSTNLGANMHSQRDGQ GELY*QLCDRGVLCI*IG*AIN*NDDRRGGGGTLQLCEVPG*EQA*+EV NFRPV*SG*LGLKYLALFEYYE*FS*SIISLRVYRCFQC Q+SSCYT*CAW*W*E*FNKGVNLRGREF GFH CSRQS* H E Subject 502 QGSVCF*PHILWMVLV*GGNIQETSTNLGANMHSQRDGQSGELY*QLCDRGVLCI*IG*AIN*NDDRRGGGGTLQLCEVPG*EQA*DEVLNFRPV*SG*LGLKYLALFEYYE*FS*SIISLRVYRCFQCTQISSCYT*CAW*W*E*FNKGVNLRGREFRGFHSGCSRQS*PHRE 1023
Range 4: 503 to 1024 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
320.4 bits(693) | 0.0 | 163/174(94%) | 0/174(0%) | Plus/Minus |
Query 24 PPREIRTVWNTCSESHKTLVL*D*LPYXXXXXXXXXXMYNNWKLEHTENTYKLEG**CFN*IIHNTRTTPNT*GLINHFKQA*N*TPHFMLVPNQEPHTIXXXXXXXXXXXXN**LTQSICIGHLYRIIVNTVLQIAHLSGYAYSLPN*LRFLEGSLLKQAPSTECGVRNKLNL 545 PP E+RTVWNT ESH+TLVL*D*LPY*TTLTTTRHTMYNNWK E+TENTYKLEG**CFN*IIHNTRTTPNT*GLINHFKQA*N* PH MLVPNQEPHTIVVCLHLLFCHHFN**LTQSICIGHLYRIIVNT+LQIAHLSGYAYSLPN*LRFLE SLLKQAPSTECGVRNKLNL Subject 503 PPCEVRTVWNTRCESHETLVL*D*LPY*TTLTTTRHTMYNNWKFEYTENTYKLEG**CFN*IIHNTRTTPNT*GLINHFKQA*N*APHLMLVPNQEPHTIVVCLHLLFCHHFN**LTQSICIGHLYRIIVNTILQIAHLSGYAYSLPN*LRFLEYSLLKQAPSTECGVRNKLNL 1024
Range 5: 504 to 863 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
273.7 bits(591) | 0.0 | 116/120(97%) | 0/120(0%) | Minus/Plus |
Query 185 RFSLFLTPHSVDGACLRREPSRNLN*FGSEYA*PERWAIWRTVLTIMR*RCPMHIDWVSYQLK**QKRRWRHTTIV*GSWLGTSIK*GVQFQACLKWLIRP*VFGVVRVL*II*LKHYQP 544 RFSLFLTPHSVDGACLRRE SRNLN*FGSEYA*PERWAIWR VLTIMR*RCPMHIDWVSYQLK**QKRRWRHTTIV*GSWLGTSI+*G QFQACLKWLIRP*VFGVVRVL*II*LKHYQP Subject 504 RFSLFLTPHSVDGACLRREYSRNLN*FGSEYA*PERWAIWRIVLTIMR*RCPMHIDWVSYQLK**QKRRWRHTTIV*GSWLGTSIR*GAQFQACLKWLIRP*VFGVVRVL*II*LKHYQP 863
Range 6: 909 to 1034 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
55.1 bits(114) | 0.0 | 34/42(81%) | 0/42(0%) | Minus/Plus |
Query 14 YIVCLXXXXXXX*GS*SQRTRVLWLSLQVFQTVLISRGGPNT 139 YIVCLVVVRVV**GS*SQRTRV WLS +VFQTVL S+GG ++ Subject 909 YIVCLVVVRVV**GS*SQRTRVSWLSQRVFQTVLTSQGGTSS 1034
Range 7: 502 to 897 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
254.5 bits(549) | 0.0 | 129/132(98%) | 0/132(0%) | Plus/Minus |
Query 151 NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEIEHLILCLFLTRNLTQL*CAXXXXXXXXXXXXXPNLYA*DTSIA*LSIQFSKLPISLAMHIRSQIS*GFLKVPSLNKHHPQNVGLETN*TL 546 NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEIEHLILCLFLTRNLTQL*CASTSSSVIISIDSSPNLYA*DTSIA*LSIQFS+LPISLAMHIRSQIS*GFL +PSLNKHHPQNVGLETN*TL Subject 502 NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEIEHLILCLFLTRNLTQL*CASTSSSVIISIDSSPNLYA*DTSIA*LSIQFSRLPISLAMHIRSQIS*GFLNIPSLNKHHPQNVGLETN*TL 897
Grapevine rupestris stem pitting associated virus complete genome, genomic RNA, isolate GRSPaV MG
Sequence ID: FR691076.1 Length: 8749 Number of Matches: 8
Range 1: 6247 to 6768 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
412.5 bits(894) | 0.0 | 171/174(98%) | 0/174(0%) | Minus/Plus |
Query 24 KVQFVSNPTFCGWCLFKEGTFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGR 545 KVQFVSNPTFCGWCLFKEG FKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRC ISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFP+VIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGR Subject 6247 KVQFVSNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCLISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPIVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGR 6768
Range 2: 6248 to 6769 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
391.5 bits(848) | 0.0 | 165/174(95%) | 0/174(0%) | Plus/Minus |
Query 23 SSP*D*DCLEHLQ*KPQNSRPLRLTPLLNYSYHYQAHYV*QLET*AH*KHL*TRRLIML*LNYS*YSNNAKYLRPNQPLQTGLKLNTSFYACS*PGTSHNCSVPPPPLLSSFQLIAHPIYMHRTPLSHNCQYSSPNCPSLWLCIFAPKLVEVS*RFPP*TSTIHRMWG*KQTEP 544 +S * *DCLEHL *KP+NSRPLRLTPLLNYSYHYQAHYV*QLE *AH*KHL*TRRLIML*LNYS*YSNNAKYLRPNQPLQTGLKL+TS YACS*PGTSHNCSVPPPPLLSS QLIAHPIYMHRTPLSHNCQYSSPNCPSLWLCIFAPKLVEVS*RFPP*TSTIHRMWG*KQTEP Subject 6248 TSL*G*DCLEHLL*KPRNSRPLRLTPLLNYSYHYQAHYV*QLEI*AH*KHL*TRRLIML*LNYS*YSNNAKYLRPNQPLQTGLKLDTSSYACS*PGTSHNCSVPPPPLLSSSQLIAHPIYMHRTPLSHNCQYSSPNCPSLWLCIFAPKLVEVS*RFPP*TSTIHRMWG*KQTEP 6769
Range 3: 6246 to 6767 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
345.6 bits(748) | 0.0 | 163/174(94%) | 0/174(0%) | Minus/Plus |
Query 25 QGSVCF*PHILWMVLV*GGNLQETSTNLGANMHSQRDGQFGELY*QLCDRGVLCI*IG*AIXXXXXXXXXXGTLQLCEVPG*EQA*NEVFNFRPV*SG*LGLKYLALFEYYE*FS*SIISLRVYRCFQCAQVSSCYT*CAW*W*E*FNKGVNLRGREFCGFHCRCSRQS*SHGE 546 QGSVCF*PHILWMVLV GGNLQETSTNLGANMHSQRDGQFGELY*QLCDRGVLCI*IG*AIN*+DDRRGGGGTLQLCEVPG*EQA*+EV NFRPV*SG*LGLKYLALFEYYE*FS*SIISLRVYRCFQCA +S+CYT*CAW*W*E*FNKGVNLRGREF GFH RCSRQS* H E Subject 6246 QGSVCF*PHILWMVLVQGGNLQETSTNLGANMHSQRDGQFGELY*QLCDRGVLCI*IG*AIN*DDDRRGGGGTLQLCEVPG*EQA*DEVSNFRPV*SG*LGLKYLALFEYYE*FS*SIISLRVYRCFQCA*ISNCYT*CAW*W*E*FNKGVNLRGREFRGFHSRCSRQS*PHRE 6767
Range 4: 6247 to 6768 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
328.7 bits(711) | 0.0 | 164/174(94%) | 0/174(0%) | Plus/Minus |
Query 24 PPREIRTVWNTCSESHKTLVL*D*LPYXXXXXXXXXXMYNNWKLEHTENTYKLEG**CFN*IIHNTRTTPNT*GLINHFKQA*N*TPHFMLVPNQEPHTIXXXXXXXXXXXXN**LTQSICIGHLYRIIVNTVLQIAHLSGYAYSLPN*LRFLEGSLLKQAPSTECGVRNKLNL 545 PP E+RTVWNTC ESH+TLVL*D*LPY*TTLTTTRHTMYNNWK +HTENTYKLEG**CFN*IIHNTRTTPNT*GLINHFKQA*N*TPH MLVPNQEPHTIVVCLHLLFCHH N**LTQSICIGHLYRIIVNTVLQIAHLSGYAYSLPN*LRFLE SLL+QAPSTECGVRNKLNL Subject 6247 PPCEVRTVWNTCCESHETLVL*D*LPY*TTLTTTRHTMYNNWKFKHTENTYKLEG**CFN*IIHNTRTTPNT*GLINHFKQA*N*TPHLMLVPNQEPHTIVVCLHLLFCHHLN**LTQSICIGHLYRIIVNTVLQIAHLSGYAYSLPN*LRFLEDSLLEQAPSTECGVRNKLNL 6768
Range 5: 6248 to 6607 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
271.0 bits(585) | 0.0 | 115/120(96%) | 0/120(0%) | Minus/Plus |
Query 185 RFSLFLTPHSVDGACLRREPSRNLN*FGSEYA*PERWAIWRTVLTIMR*RCPMHIDWVSYQLK**QKRRWRHTTIV*GSWLGTSIK*GVQFQACLKWLIRP*VFGVVRVL*II*LKHYQP 544 RFSLFLTPHSVDGAC RRE SRNLN*FGSEYA*PERWAIWRTVLTIMR*RCPMHIDWVSYQL+**QKRRWRHTTIV*GSWLGTSI+*GV FQACLKWLIRP*VFGVVRVL*II*LKHYQP Subject 6248 RFSLFLTPHSVDGACSRRESSRNLN*FGSEYA*PERWAIWRTVLTIMR*RCPMHIDWVSYQLR**QKRRWRHTTIV*GSWLGTSIR*GV*FQACLKWLIRP*VFGVVRVL*II*LKHYQP 6607
Range 6: 6653 to 6778 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
57.0 bits(118) | 0.0 | 35/42(83%) | 0/42(0%) | Minus/Plus |
Query 14 YIVCLXXXXXXX*GS*SQRTRVLWLSLQVFQTVLISRGGPNT 139 YIVCLVVVRVV**GS*SQRTRV WLS QVFQTVL S+GG ++ Subject 6653 YIVCLVVVRVV**GS*SQRTRVSWLSQQVFQTVLTSQGGTSS 6778
Range 7: 6246 to 6641 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
255.8 bits(552) | 0.0 | 130/132(98%) | 0/132(0%) | Plus/Minus |
Query 151 NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEIEHLILCLFLTRNLTQL*CAXXXXXXXXXXXXXPNLYA*DTSIA*LSIQFSKLPISLAMHIRSQIS*GFLKVPSLNKHHPQNVGLETN*TL 546 NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEI HLILCLFLTRNLTQL*CASTSSSVIISIDSSPNLYA*DTSIA*LSIQFSKLPISLAMHIRSQIS*GFLK+PSLNKHHPQNVGLETN*TL Subject 6246 NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEIRHLILCLFLTRNLTQL*CASTSSSVIISIDSSPNLYA*DTSIA*LSIQFSKLPISLAMHIRSQIS*GFLKIPSLNKHHPQNVGLETN*TL 6641
Grapevine rupestris stem pitting associated virus isolate SK704 C, complete genome
Sequence ID: KX274276.1 Length: 8726 Number of Matches: 8
Range 1: 6248 to 6769 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
412.5 bits(894) | 0.0 | 171/174(98%) | 0/174(0%) | Minus/Plus |
Query 24 KVQFVSNPTFCGWCLFKEGTFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGR 545 KVQFVSNPTFCGWCLFKEG FKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFE VD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDE+FVAFTAGVPDSPNLTGR Subject 6248 KVQFVSNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFVAFTAGVPDSPNLTGR 6769
Range 2: 6249 to 6761 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
357.1 bits(773) | 0.0 | 152/171(89%) | 0/171(0%) | Plus/Minus |
Query 32 *D*DCLEHLQ*KPQNSRPLRLTPLLNYSYHYQAHYV*QLET*AH*KHL*TRRLIML*LNYS*YSNNAKYLRPNQPLQTGLKLNTSFYACS*PGTSHNCSVPPPPLLSSFQLIAHPIYMHRTPLSHNCQYSSPNCPSLWLCIFAPKLVEVS*RFPP*TSTIHRMWG*KQTEP 544 *D*DCLEHL *KP+NSRPLRLTPLLNYSYH QAHYV*QLE *AH*KHL*T++LIML*LNYS*YSNNAKYLRPNQ LQ GLKL+TSFYACS GTSHNCSVPPP LSSFQ IAHPI MHRTPLSHNCQYSSPNCP LWLCIF+P+LVEVS*RFPP* STIHRMWG*KQTEP Subject 6249 *D*DCLEHLP*KPRNSRPLRLTPLLNYSYHCQAHYV*QLEI*AH*KHL*TQKLIML*LNYS*YSNNAKYLRPNQLLQIGLKLSTSFYACSSLGTSHNCSVPPPLPLSSFQWIAHPICMHRTPLSHNCQYSSPNCPFLWLCIFSPRLVEVS*RFPP*ISTIHRMWG*KQTEP 6761
Range 3: 6247 to 6762 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
330.5 bits(715) | 0.0 | 153/172(89%) | 0/172(0%) | Minus/Plus |
Query 31 QGSVCF*PHILWMVLV*GGNLQETSTNLGANMHSQRDGQFGELY*QLCDRGVLCI*IG*AIXXXXXXXXXXGTLQLCEVPG*EQA*NEVFNFRPV*SG*LGLKYLALFEYYE*FS*SIISLRVYRCFQCAQVSSCYT*CAW*W*E*FNKGVNLRGREFCGFHCRCSRQS*SH 546 QGSVCF*PHILWMVL+ GGNLQETSTNLG NMHSQR+GQFGELY*QLCDRGVLCI IG*AI+*NDDR GGGTLQLCEVP EQA*NEV NFRP+*S *LGLKYLALFEYYE*FS*SIIS VYRCFQCAQ+SSCYT*CAW W*E*FNKGVNLRGREF GFH RCSRQS*SH Subject 6247 QGSVCF*PHILWMVLIQGGNLQETSTNLGENMHSQRNGQFGELY*QLCDRGVLCIQIG*AIH*NDDRGRGGGTLQLCEVPSEEQA*NEVLNFRPI*SS*LGLKYLALFEYYE*FS*SIISF*VYRCFQCAQISSCYT*CAWQW*E*FNKGVNLRGREFRGFHGRCSRQS*SH 6762
Range 4: 6248 to 6769 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
293.9 bits(635) | 0.0 | 151/174(87%) | 0/174(0%) | Plus/Minus |
Query 24 PPREIRTVWNTCSESHKTLVL*D*LPYXXXXXXXXXXMYNNWKLEHTENTYKLEG**CFN*IIHNTRTTPNT*GLINHFKQA*N*TPHFMLVPNQEPHTIXXXXXXXXXXXXN**LTQSICIGHLYRIIVNTVLQIAHLSGYAYSLPN*LRFLEGSLLKQAPSTECGVRNKLNL 545 P EIRTVWNTC ESH+ LVL*D*LPY*TTLTT RHTMYNNWK EHTENTYKL+ **CFN*IIHNTRTTPNT*GLIN FK A*N* PHFMLVP+ EPHTIVVCLHL CHHFN *LTQS+CIGHLYRIIVNTVLQIAH SGYAYSLP+*LRFLE SLL+ APSTECGVRNKLNL Subject 6248 PSCEIRTVWNTCRESHEILVL*D*LPY*TTLTTARHTMYNNWKFEHTENTYKLKS**CFN*IIHNTRTTPNT*GLINCFK*A*N*APHFMLVPH*EPHTIVVCLHLFLCHHFNG*LTQSVCIGHLYRIIVNTVLQIAHFSGYAYSLPD*LRFLEDSLLE*APSTECGVRNKLNL 6769
Range 5: 6247 to 6642 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
252.6 bits(545) | 0.0 | 128/132(97%) | 0/132(0%) | Plus/Minus |
Query 151 NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEIEHLILCLFLTRNLTQL*CAXXXXXXXXXXXXXPNLYA*DTSIA*LSIQFSKLPISLAMHIRSQIS*GFLKVPSLNKHHPQNVGLETN*TL 546 NLSTLKTPINSKADNALTKLFIILEQRQILKA*ST SNRPEIEHLILCLFLTRNLTQL*CASTSSSVIIS+DSSPNLYA*DTSIA*LSIQFSKLPISLAMHI SQIS*GFLK+PSLNKHHPQNVGLETN*TL Subject 6247 NLSTLKTPINSKADNALTKLFIILEQRQILKA*STASNRPEIEHLILCLFLTRNLTQL*CASTSSSVIISMDSSPNLYA*DTSIA*LSIQFSKLPISLAMHILSQIS*GFLKIPSLNKHHPQNVGLETN*TL 6642
Range 6: 6694 to 6774 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
55.6 bits(115) | 0.0 | 24/27(89%) | 0/27(0%) | Plus/Minus |
Query 19 LVLPVRLGLSGTPAVKATKLSSSEINS 99 + LPVRLGLSGTPAVKATK SSSEINS Subject 6694 MYLPVRLGLSGTPAVKATKFSSSEINS 6774
Range 7: 6249 to 6605 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
231.1 bits(498) | 0.0 | 104/119(87%) | 0/119(0%) | Minus/Plus |
Query 188 RFSLFLTPHSVDGACLRREPSRNLN*FGSEYA*PERWAIWRTVLTIMR*RCPMHIDWVSYQLK**QKRRWRHTTIV*GSWLGTSIK*GVQFQACLKWLIRP*VFGVVRVL*II*LKHYQ 544 RFSLFLTPHSVDGA RRE SRNLN* G EYA*PE+WAIWRTVLTIMR*RCPMH DWVSY LK**Q++RWRHTTIV*GS GTSIK*G QFQA LK LIRP*VFGVVRVL*II*LKHYQ Subject 6249 RFSLFLTPHSVDGAYSRRESSRNLN*SGREYA*PEKWAIWRTVLTIMR*RCPMHTDWVSYPLK**QRKRWRHTTIV*GS**GTSIK*GAQFQAYLKQLIRP*VFGVVRVL*II*LKHYQ 6605
Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome
Sequence ID: JX559646.1 Length: 8726 Number of Matches: 8
Range 1: 6247 to 6768 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
407.0 bits(882) | 0.0 | 169/174(97%) | 0/174(0%) | Minus/Plus |
Query 24 KVQFVSNPTFCGWCLFKEGTFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGR 545 KVQFVSNPTFCGWCLFKEG FKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFE VD*ALSIW C SIMNNLVKALS FEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGR Subject 6247 KVQFVSNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAVD*ALSIWHCLSIMNNLVKALSTFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGR 6768
Range 2: 6248 to 6754 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
339.2 bits(734) | 0.0 | 147/169(87%) | 0/169(0%) | Plus/Minus |
Query 38 *DCLEHLQ*KPQNSRPLRLTPLLNYSYHYQAHYV*QLET*AH*KHL*TRRLIML*LNYS*YSNNAKYLRPNQPLQTGLKLNTSFYACS*PGTSHNCSVPPPPLLSSFQLIAHPIYMHRTPLSHNCQYSSPNCPSLWLCIFAPKLVEVS*RFPP*TSTIHRMWG*KQTEP 544 *D LEHL *KP+NSRPLRLTPLLNYSYH Q HYV*+LE *AH*KHL* RRL ML* NYS*YSNNAKYLRPNQPLQ GLKL+TS YACS* GTSHNCSVPPPP LSSF+ IAHPIYMHRTPLSHN Q SS +CPSLWLCIFAPKLVEVS*RFPP* STIHRMWG*KQTEP Subject 6248 *DYLEHLL*KPRNSRPLRLTPLLNYSYHCQVHYV*RLEI*AH*KHL*IRRLTML*PNYS*YSNNAKYLRPNQPLQIGLKLSTSSYACS*LGTSHNCSVPPPPPLSSFRWIAHPIYMHRTPLSHNYQCSSLDCPSLWLCIFAPKLVEVS*RFPP*ISTIHRMWG*KQTEP 6754
Range 3: 6246 to 6761 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
314.9 bits(681) | 0.0 | 147/172(85%) | 0/172(0%) | Minus/Plus |
Query 31 QGSVCF*PHILWMVLV*GGNLQETSTNLGANMHSQRDGQFGELY*QLCDRGVLCI*IG*AIXXXXXXXXXXGTLQLCEVPG*EQA*NEVFNFRPV*SG*LGLKYLALFEYYE*FS*SIISLRVYRCFQCAQVSSCYT*CAW*W*E*FNKGVNLRGREFCGFHCRCSRQS*SH 546 QGSVCF*PHILWMVL+*GGNLQETSTNLGANMHSQRDGQ EL+* LCDRGVLCI*IG*AI+ NDDR GGGGTLQLCEVP *EQA*+EV NFRP+*SG*LGLKYLALFEYYE*F *SI++LR+YRCFQCA +SS YT*C W W*E*FNKGVNLRGREF GFH RCSR S* H Subject 6246 QGSVCF*PHILWMVLI*GGNLQETSTNLGANMHSQRDGQSRELH**LCDRGVLCI*IG*AIHRNDDRGGGGGTLQLCEVPS*EQA*DEVLNFRPI*SG*LGLKYLALFEYYE*FG*SIVNLRIYRCFQCA*ISSRYT*CTWQW*E*FNKGVNLRGREFRGFHSRCSR*S*PH 6761
Range 4: 6247 to 6768 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
283.3 bits(612) | 0.0 | 145/174(83%) | 0/174(0%) | Plus/Minus |
Query 24 PPREIRTVWNTCSESHKTLVL*D*LPYXXXXXXXXXXMYNNWKLEHTENTYKLEG**CFN*IIHNTRTTPNT*GLINHFKQA*N*TPHFMLVPNQEPHTIXXXXXXXXXXXXN**LTQSICIGHLYRIIVNTVLQIAHLSGYAYSLPN*LRFLEGSLLKQAPSTECGVRNKLNL 545 P E+RT+WNTC ESH+TLVL*D*LPY*TTLTT R+TMYN+WK +HTENTYK EG* CFN IIHNT+T PNT*GLIN FK A*N* PH MLVPN EPHTIVVCLHLL CHHF+ *LTQSICIGHLYRII+N VL IAHLSGYAYSLPN*LRFLE SLLK APSTECGVRNKLNL Subject 6247 PSCEVRTIWNTCCESHETLVL*D*LPY*TTLTTARYTMYNDWKFKHTENTYKFEG*QCFNQIIHNTQTMPNT*GLINRFK*A*N*APHLMLVPN*EPHTIVVCLHLLLCHHFDG*LTQSICIGHLYRIIINAVL*IAHLSGYAYSLPN*LRFLEDSLLK*APSTECGVRNKLNL 6768
Range 5: 6246 to 6641 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
245.8 bits(530) | 0.0 | 124/132(94%) | 0/132(0%) | Plus/Minus |
Query 151 NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEIEHLILCLFLTRNLTQL*CAXXXXXXXXXXXXXPNLYA*DTSIA*LSIQFSKLPISLAMHIRSQIS*GFLKVPSLNKHHPQNVGLETN*TL 546 NLSTLKTPINSK DNALTKLFIIL+Q QILKA*ST SNRPEIEHLILCLFLTRNLTQL*CASTSSSVIIS+DSSPNLYA*DTSIA*LS+QFS+LPISLAMHIRSQIS*GFLK+PSLNKHHPQNVGLETN*TL Subject 6246 NLSTLKTPINSKVDNALTKLFIILKQCQILKA*STASNRPEIEHLILCLFLTRNLTQL*CASTSSSVIISMDSSPNLYA*DTSIA*LSMQFSRLPISLAMHIRSQIS*GFLKIPSLNKHHPQNVGLETN*TL 6641
Range 6: 6693 to 6773 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
57.4 bits(119) | 0.0 | 25/27(93%) | 0/27(0%) | Plus/Minus |
Query 19 LVLPVRLGLSGTPAVKATKLSSSEINS 99 + LPVRLGLSGTPAVKATKLSSSEINS Subject 6693 MYLPVRLGLSGTPAVKATKLSSSEINS 6773
Range 7: 6248 to 6607 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
224.7 bits(484) | 0.0 | 103/120(86%) | 0/120(0%) | Minus/Plus |
Query 185 RFSLFLTPHSVDGACLRREPSRNLN*FGSEYA*PERWAIWRTVLTIMR*RCPMHIDWVSYQLK**QKRRWRHTTIV*GSWLGTSIK*GVQFQACLKWLIRP*VFGVVRVL*II*LKHYQP 544 RFSLFLTPHSVDGA LRRE SRNLN*FGSEYA*PERWAI RT L IMR*RCPMHIDWVSY K**Q+RRWRHTTIV*GS LGTSI+*G QFQA LK LIRP*VFG+V VL*II LKH QP Subject 6248 RFSLFLTPHSVDGAYLRRESSRNLN*FGSEYA*PERWAI*RTALIIMR*RCPMHIDWVSYPSK**QRRRWRHTTIV*GS*LGTSIR*GAQFQAYLKRLIRP*VFGIV*VL*IIWLKHCQP 6607
Grapevine rupestris stem pitting associated virus isolate TEMP BR replicase, 24.4 kDa protein, 12.8 kDa protein, 8.4 kDa protein, and 28 kDa protein genes, complete cds
Sequence ID: KX925556.1 Length: 8700 Number of Matches: 8
Range 1: 6236 to 6757 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
405.7 bits(879) | 0.0 | 167/174(96%) | 0/174(0%) | Minus/Plus |
Query 24 KVQFVSNPTFCGWCLFKEGTFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVVD*ALSIWRCSSIMNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGR 545 KVQFVSNPTFCGWCLFKEG FKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFE VD*ALSIW C SIMNNLVKALSAFEF+GVFSVLKFPV+IHSVPGSGKSSLIRELISEDE FVAFTAGVPDSPNLTGR Subject 6236 KVQFVSNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAVD*ALSIWHCLSIMNNLVKALSAFEFVGVFSVLKFPVIIHSVPGSGKSSLIRELISEDECFVAFTAGVPDSPNLTGR 6757
Range 2: 6237 to 6743 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
322.3 bits(697) | 0.0 | 141/169(83%) | 0/169(0%) | Plus/Minus |
Query 38 *DCLEHLQ*KPQNSRPLRLTPLLNYSYHYQAHYV*QLET*AH*KHL*TRRLIML*LNYS*YSNNAKYLRPNQPLQTGLKLNTSFYACS*PGTSHNCSVPPPPLLSSFQLIAHPIYMHRTPLSHNCQYSSPNCPSLWLCIFAPKLVEVS*RFPP*TSTIHRMWG*KQTEP 544 *DCLEHL *KP+N+RPLR PLLNYSYH QAHYV* LE *AH* HL TRR IML*LNYS*YSNNAKYLRPNQPLQ GLKL+ S YAC * G SH+CSVPPP LSSFQ AHPIYMHRT LSHNCQYSSP+CPSLWLCIFAPKLVEVS*RF P* STIHRMW *KQTEP Subject 6237 *DCLEHLL*KPRNTRPLRSIPLLNYSYHCQAHYV**LEI*AH*THLQTRRQIML*LNYS*YSNNAKYLRPNQPLQIGLKLSISSYACF*LGISHSCSVPPPLPLSSFQWRAHPIYMHRTLLSHNCQYSSPDCPSLWLCIFAPKLVEVS*RFLP*ISTIHRMWD*KQTEP 6743
Range 3: 6235 to 6750 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
303.9 bits(657) | 0.0 | 143/172(83%) | 0/172(0%) | Minus/Plus |
Query 31 QGSVCF*PHILWMVLV*GGNLQETSTNLGANMHSQRDGQFGELY*QLCDRGVLCI*IG*AIXXXXXXXXXXGTLQLCEVPG*EQA*NEVFNFRPV*SG*LGLKYLALFEYYE*FS*SIISLRVYRCFQCAQVSSCYT*CAW*W*E*FNKGVNLRGREFCGFHCRCSRQS*SH 546 QGSVCF* HILWMVL+*G NL ETSTNLGANMHSQRDGQ GELY*QLCDR VLCI*IG*A++*NDDR GGGTLQLCE+P *+QA*+E+ NFRP+*SG*LGLKYLALFEYYE*FS*SII LRV RC QCAQ+SS YT*CAW W*E*FNKG++LRGR F GFH RCSRQS* H Subject 6235 QGSVCF*SHILWMVLI*GRNL*ETSTNLGANMHSQRDGQSGELY*QLCDRSVLCI*IG*ALH*NDDRGRGGGTLQLCEIPS*KQA*DEMLNFRPI*SG*LGLKYLALFEYYE*FS*SIICLRVCRCVQCAQISSYYT*CAWQW*E*FNKGIDLRGRVFRGFHSRCSRQS*PH 6750
Range 4: 6235 to 6630 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
244.4 bits(527) | 0.0 | 123/132(93%) | 0/132(0%) | Plus/Minus |
Query 151 NLSTLKTPINSKADNALTKLFIILEQRQILKA*STTSNRPEIEHLILCLFLTRNLTQL*CAXXXXXXXXXXXXXPNLYA*DTSIA*LSIQFSKLPISLAMHIRSQIS*GFLKVPSLNKHHPQNVGLETN*TL 546 NLSTL TP NSKADNALTKLFIIL+Q QILKA*ST SNRPEIEHLILCLFLTRNLTQL*CASTSSSVIIS++SSPNLYA*DTSIA*LSIQFS+LPISLAMHIRSQIS*GFLK+PSLNKHHPQNVGLETN*TL Subject 6235 NLSTLNTPTNSKADNALTKLFIILKQCQILKA*STASNRPEIEHLILCLFLTRNLTQL*CASTSSSVIISMESSPNLYA*DTSIA*LSIQFSRLPISLAMHIRSQIS*GFLKIPSLNKHHPQNVGLETN*TL 6630
Range 5: 6682 to 6762 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.2 bits(112) | 0.0 | 24/27(89%) | 0/27(0%) | Plus/Minus |
Query 19 LVLPVRLGLSGTPAVKATKLSSSEINS 99 + LPVRLGLSGTPAVKATK SSSEINS Subject 6682 MYLPVRLGLSGTPAVKATKHSSSEINS 6762
Range 6: 6236 to 6757 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
275.1 bits(594) | 0.0 | 142/174(82%) | 0/174(0%) | Plus/Minus |
Query 24 PPREIRTVWNTCSESHKTLVL*D*LPYXXXXXXXXXXMYNNWKLEHTENTYKLEG**CFN*IIHNTRTTPNT*GLINHFKQA*N*TPHFMLVPNQEPHTIXXXXXXXXXXXXN**LTQSICIGHLYRIIVNTVLQIAHLSGYAYSLPN*LRFLEGSLLKQAPSTECGVRNKLNL 545 P E+RTVWNTC ESH+TLVL*D PY*TTLTT RHTMYNNWK EHTE+TYKLEG *CFN*IIHNT+T PNT*GLIN FK A*N* H MLV N E HT+VVCLHL CHHFN LTQSICIGH YRIIVNTVLQIAHLSGYAYSLPN*LRFL+ S LK APSTECG+RNKLNL Subject 6236 PSCEVRTVWNTCCESHETLVL*DQFPY*TTLTTARHTMYNNWKFEHTEHTYKLEGR*CFN*IIHNTQTMPNT*GLINRFK*A*N*ASHLMLVSN*ESHTVVVCLHLFLCHHFNGELTQSICIGHFYRIIVNTVLQIAHLSGYAYSLPN*LRFLKDSFLK*APSTECGIRNKLNL 6757
Range 7: 6237 to 6596 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
216.0 bits(465) | 0.0 | 98/120(82%) | 0/120(0%) | Minus/Plus |
Query 185 RFSLFLTPHSVDGACLRREPSRNLN*FGSEYA*PERWAIWRTVLTIMR*RCPMHIDWVSYQLK**QKRRWRHTTIV*GSWLGTSIK*GVQFQACLKWLIRP*VFGVVRVL*II*LKHYQP 544 RFSLFL PHSVDGA LR+E RNLN*FGSEYA*PERWAIWRTVLTIMR*+CPMHIDWVS LK**Q++RWRHTT V* S L TSI+* QFQA LK LIRP*VFG+V VL*II*LKHY P Subject 6237 RFSLFLIPHSVDGAYLRKESLRNLN*FGSEYA*PERWAIWRTVLTIMR*KCPMHIDWVSSPLK**QRKRWRHTTTV*DS*LETSIR*DAQFQAYLKRLIRP*VFGIV*VL*II*LKHYLP 6596
Nucleotide Sequence (625 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
488.6 | 2665.5 | 30% | 3.21e-136 | 93% | KX274274.1 | |
482.6 | 2482.4 | 31% | 1.993e-134 | 85% | KT948710.1 | |
480.8 | 2452.0 | 30% | 7.102e-134 | 86% | AB277787.1 | |
480.8 | 2379.2 | 33% | 7.102e-134 | 82% | AB277788.1 | |
484.9 | 2469.0 | 34% | 4.073e-135 | 85% | KX958435.1 |
Alignments
Grapevine rupestris stem pitting associated virus isolate SK704 A, complete genome
Sequence ID: KX274274.1 Length: 8725 Number of Matches: 7
Range 1: 6301 to 6921 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
488.6 bits(1060) | 0.0 | 204/207(99%) | 0/207(0%) | Plus/Plus |
Query 3 GIFKKPQLIWERICIAREIGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWHGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNINVPREAHFIK 623 GIFKKPQLIWERICIARE+GNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVW GVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNI+VPREAHFIK Subject 6301 GIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWRGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNISVPREAHFIK 6921
Range 2: 6304 to 6921 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
483.1 bits(1048) | 0.0 | 193/206(94%) | 0/206(0%) | Minus/Minus |
Query 6 LYEVCLPWNVDVLVRV*EQHIKTMNIRDRQVLIKYVYLPLHCTPWRVGLDVPSC*IWTVWHTCCESHERLVFRNELPY*ATFTATWNTMNNNWKFKHAEHTNKFKCRQSLD*VIHNTHTMPNT*GLNNNLKQTRN*APHFVLIPNQETHAVIMRFNFLLSHHAYR*FSKSVGIRYLDCIIINAIFQIAYFPSNADPLPNKLRLFKD 623 LYEVCLPWN DVLVRV*EQHIKTMNIRDRQVLIKYVYLPLHCTPWRVGLDVPSC*IWTVWHTCC+SHERLVFRNELPY*AT TATWNTMNNNWKFKHAEHTNKFKC QSLD*VIHNTHT PNT*GLNN+LKQTRN*APHFVLIPNQETHAVIMRFNFLLSHHAY *FSK +GIR+L+CIIINAIFQIA+FPSNA+PLPNKLRLFKD Subject 6304 LYEVCLPWNADVLVRV*EQHIKTMNIRDRQVLIKYVYLPLHCTPWRVGLDVPSC*IWTVWHTCCKSHERLVFRNELPY*ATLTATWNTMNNNWKFKHAEHTNKFKC*QSLD*VIHNTHTTPNT*GLNNDLKQTRN*APHFVLIPNQETHAVIMRFNFLLSHHAYG*FSKPIGIRHLNCIIINAIFQIAHFPSNANPLPNKLRLFKD 6921
Range 3: 6300 to 6923 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
435.0 bits(943) | 0.0 | 197/208(95%) | 0/208(0%) | Plus/Plus |
Query 2 GDL*KASAYLGEDLHC*GNRQFGKLH**LCNRGILCLQTWRIIYRRDD*GGS*SAL*LRAFPGSE*AQNEVLNFWFV*GYCLGLKCLAWCEYYE*LSQGFVCI*ICWCVLRA*IXXXXXXXXR*R*K*PNKGAHF*RRVFRGFHSRCARQSKSNRKVHQALLSRVCSAREDKHT**VLVCL*YSWF*CAVLRPLPEHQRSKGGTLHKD 625 G+L*KASAYLGEDLHC*GN QFGKLH**LCN G+LCL WRII+RRDD*GGS*SAL*LRAFPGSE*AQNEVLNFWFV*G+CLGLKCLAWCEYYE*LSQGFV I*ICWCVLRA*ISSCCS*CSR*R*+*PNKGAHF*RRVFRGF+SRCARQSKSNRKVHQALLSRVCSAREDKHT**VLVCL*YSWF*CAVLRPLPEHQRSKGGTLHKD Subject 6300 GNL*KASAYLGEDLHC*GNGQFGKLH**LCN*GVLCL*AWRIIHRRDD*GGS*SAL*LRAFPGSE*AQNEVLNFWFV*GHCLGLKCLAWCEYYE*LSQGFVSI*ICWCVLRA*ISSCCS*CSR*R*E*PNKGAHF*RRVFRGFYSRCARQSKSNRKVHQALLSRVCSAREDKHT**VLVCL*YSWF*CAVLRPLPEHQRSKGGTLHKD 6923
Range 4: 6299 to 6922 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
429.0 bits(930) | 0.0 | 198/208(95%) | 0/208(0%) | Minus/Minus |
Query 1 SL*SVPPLER*CSGKGLRTAHQNHEYQRQTSTHQVCLSSLALHTLESRA*CTFXXXXXXXXXXX*KPRKTRLQK*APLLGYFYRYLEHYEQQLEI*ARRTHQQIQMQTKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSFCAYSEPGNARSYNALQLPPQSSRL*IILQVCRHKIPRLHNYQCNFPNCLFP*QCRSSPK*AEAF*RSP 624 SL*SVPPLER*CSGKGLRTAHQNHEYQRQTSTHQVCLSSLALHTLESRA*CTFLLDLDCLAHLL*KPRKTRLQK*APLLGY YRYLEHYEQQLEI*ARRTHQQIQM TKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSFCAYSEPGNARSYNALQLPPQSSRL IILQ RHK P+LHNYQCNFPNC FP*QC+SSPK*AEAF*R P Subject 6299 SL*SVPPLER*CSGKGLRTAHQNHEYQRQTSTHQVCLSSLALHTLESRA*CTFLLDLDCLAHLL*KPRKTRLQK*APLLGYSYRYLEHYEQQLEI*ARRTHQQIQMLTKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSFCAYSEPGNARSYNALQLPPQSSRLWIILQAYRHKTPQLHNYQCNFPNCPFP*QCKSSPK*AEAF*RFP 6922
Range 5: 6299 to 6922 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
422.2 bits(915) | 0.0 | 194/208(93%) | 0/208(0%) | Plus/Plus |
Query 1 RGSLKSLSLFGRGSALLGK*AIWKIALIIMQSRYLMPTDLENYL*A**LRRKLKRIITACVSWFGISTK*GAQFLVCLRLLFRP*VFGMV*VL*IT*SRLCLHLNLLVCSACLNFQLLFIVFQVAVKVA**GSSFLKTSLSWLSQQVCQTVQI*QEGTSSPTLQGVQCKGR*TYLMSTCLSLIFMVLMCCSQTLTRTSTFQGRHTS*R 624 R SLKSLSLFGRG ALLGK AIWKIALIIMQ R LMP LENY *A**LRRKLKRIITACVSWFGISTK*GAQFLVCLR LFRP*VFG+V*VL*IT*SRLC HLNLLVCSACLNFQLLFIVFQVAV+VA**GSSFLKTSLSWL QQVCQTVQI*QEGTSSPTLQGVQCKGR*TYLMSTCLSLIFMVLMCCSQTLTRTS FQGRHTS*R Subject 6299 RESLKSLSLFGRGFALLGKWAIWKIALIIMQLRCLMPIGLENYP*A**LRRKLKRIITACVSWFGISTK*GAQFLVCLRSLFRP*VFGVV*VL*IT*SRLCQHLNLLVCSACLNFQLLFIVFQVAVRVA**GSSFLKTSLSWLLQQVCQTVQI*QEGTSSPTLQGVQCKGR*TYLMSTCLSLIFMVLMCCSQTLTRTSAFQGRHTS*R 6922
Range 6: 6300 to 6614 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
220.1 bits(474) | 0.0 | 102/105(97%) | 0/105(0%) | Minus/Minus |
Query 2 NSNADKALTKLFIILTPCQTLKA*TITSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPISLAMQILSQIS*GFLKIP 316 NSNADKALTKLFIILTP QTLKA*T+TSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITP+DNSPSL*A*DTSIA*LSMQFSKLPISLAMQILSQIS*GFLKIP Subject 6300 NSNADKALTKLFIILTPRQTLKA*TMTSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITPMDNSPSL*A*DTSIA*LSMQFSKLPISLAMQILSQIS*GFLKIP 6614
Range 7: 6684 to 6923 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
187.6 bits(403) | 0.0 | 80/80(100%) | 0/80(0%) | Minus/Minus |
Query 386 VFMKCASLGTLMFW*GSENSTSKP*ISETDKYSSSMFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR 625 VFMKCASLGTLMFW*GSENSTSKP*ISETDKYSSSMFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR Subject 6684 VFMKCASLGTLMFW*GSENSTSKP*ISETDKYSSSMFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR 6923
Grapevine rupestris stem pitting associated virus isolate VF1, partial genome
Sequence ID: KT948710.1 Length: 8716 Number of Matches: 8
Range 1: 6302 to 6922 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
482.6 bits(1047) | 0.0 | 202/207(98%) | 0/207(0%) | Plus/Plus |
Query 3 GIFKKPQLIWERICIAREIGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWHGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNINVPREAHFIK 623 GIFKKPQLIWERICIARE+GNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVW GVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGC VQGKINILDEYLSVSDI GFDVLFSDPYQNI+VPREAHFIK Subject 6302 GIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWRGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCVVQGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIK 6922
Range 2: 6305 to 6922 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
439.6 bits(953) | 0.0 | 176/206(85%) | 0/206(0%) | Minus/Minus |
Query 6 LYEVCLPWNVDVLVRV*EQHIKTMNIRDRQVLIKYVYLPLHCTPWRVGLDVPSC*IWTVWHTCCESHERLVFRNELPY*ATFTATWNTMNNNWKFKHAEHTNKFKCRQSLD*VIHNTHTMPNT*GLNNNLKQTRN*APHFVLIPNQETHAVIMRFNFLLSHHAYR*FSKSVGIRYLDCIIINAIFQIAYFPSNADPLPNKLRLFKD 623 LYEVCLPWN DVLV V*EQHIKT NIRDRQVLIKY+YLPLH TPWRVGLDVPSC IWTVW+T C+SH+RLV RN+LPY* TFTATWNTMNNNWKFKH EHTNKFKCRQSLD*VIHNTHT PNT*GLNNNLKQTRN*APHF+LI NQETH VIMR NFLLSHH YR FSKSV IR+L+CI+INAI QIA+F SNAD LPN+LRLFKD Subject 6305 LYEVCLPWNADVLVGV*EQHIKTRNIRDRQVLIKYIYLPLHYTPWRVGLDVPSCKIWTVWYTRCKSHKRLVLRNKLPY*TTFTATWNTMNNNWKFKHTEHTNKFKCRQSLD*VIHNTHTTPNT*GLNNNLKQTRN*APHFMLISNQETHTVIMRLNFLLSHHTYRQFSKSVSIRHLNCIVINAILQIAHFSSNADSLPNELRLFKD 6922
Range 3: 6301 to 6924 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
388.7 bits(842) | 0.0 | 181/208(87%) | 0/208(0%) | Plus/Plus |
Query 2 GDL*KASAYLGEDLHC*GNRQFGKLH**LCNRGILCLQTWRIIYRRDD*GGS*SAL*LRAFPGSE*AQNEVLNFWFV*GYCLGLKCLAWCEYYE*LSQGFVCI*ICWCVLRA*IXXXXXXXXR*R*K*PNKGAHF*RRVFRGFHSRCARQSKSNRKVHQALLSRVCSAREDKHT**VLVCL*YSWF*CAVLRPLPEHQRSKGGTLHKD 625 G+L*KASA+LGE+LHC* N QFG+LH**LCN G+LCLQTWRI+YR DD*GGS* AL*L AFPGS+*A NEVLNFW V*GYCLGLKCLAWCEYYE*LSQGFVCI*ICWCVL A*ISSCCS*CSR*R*K* NKGA+F* RVF GF+S C RQSKS RKVHQALLSRVCSAREDK+T**V VCL*Y WF*CAVLRPLPEHQRSKGGTLHKD Subject 6301 GNL*KASAHLGENLHC*RNGQFGELH**LCN*GVLCLQTWRIVYRCDD*GGS*GAL*LCAFPGSK*A*NEVLNFWSV*GYCLGLKCLAWCEYYE*LSQGFVCI*ICWCVLCA*ISSCCS*CSR*R*K*SNKGAYF*GRVFCGFYSGCTRQSKSYRKVHQALLSRVCSAREDKYT**VPVCL*YFWF*CAVLRPLPEHQRSKGGTLHKD 6924
Range 4: 6301 to 6615 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
220.1 bits(474) | 0.0 | 102/105(97%) | 0/105(0%) | Minus/Minus |
Query 2 NSNADKALTKLFIILTPCQTLKA*TITSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPISLAMQILSQIS*GFLKIP 316 NSNADKALTKLFIILTP QTLKA*TITSN+PEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPISLAMQILSQ+S*GFLKIP Subject 6301 NSNADKALTKLFIILTPRQTLKA*TITSNRPEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPISLAMQILSQMS*GFLKIP 6615
Range 5: 6685 to 6924 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
178.4 bits(383) | 0.0 | 75/80(94%) | 0/80(0%) | Minus/Minus |
Query 386 VFMKCASLGTLMFW*GSENSTSKP*ISETDKYSSSMFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR 625 VFMKCASLGTLMFW*GSENSTSKP ISETD+YSSS+FIFPCT HPGE*GLMYLPVRFGLSGTPAVKATKDSSSE+SSLIR Subject 6685 VFMKCASLGTLMFW*GSENSTSKPEISETDRYSSSIFIFPCTTHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEISSLIR 6924
Range 6: 6300 to 6923 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
375.9 bits(814) | 0.0 | 177/208(85%) | 0/208(0%) | Plus/Plus |
Query 1 RGSLKSLSLFGRGSALLGK*AIWKIALIIMQSRYLMPTDLENYL*A**LRRKLKRIITACVSWFGISTK*GAQFLVCLRLLFRP*VFGMV*VL*IT*SRLCLHLNLLVCSACLNFQLLFIVFQVAVKVA**GSSFLKTSLSWLSQQVCQTVQI*QEGTSSPTLQGVQCKGR*TYLMSTCLSLIFMVLMCCSQTLTRTSTFQGRHTS*R 624 R SLKSLS FGR SALL K AIW+IALI MQ R LM TDLEN L* **LRRKL+RIIT CVSWF IS K*GAQFLVCLRLLFRP*VFG+V*VL*IT*SRLCLHLNLLVCS CLNFQLLFIVFQVAVKV **GS FL+TSL WL Q+V QTVQI QEGTSSPTLQGV CKGR* YLMSTCLSLIF+VLMCCSQT TRTS FQGRHTS*R Subject 6300 RESLKSLSSFGRESALLEKWAIWRIALITMQLRCLMLTDLENCL*V**LRRKLRRIITVCVSWFEISIK*GAQFLVCLRLLFRP*VFGVV*VL*IT*SRLCLHLNLLVCSVCLNFQLLFIVFQVAVKVV**GSLFLRTSLLWLLQRVYQTVQILQEGTSSPTLQGV*CKGR*IYLMSTCLSLIFLVLMCCSQTPTRTSAFQGRHTS*R 6923
Range 7: 6300 to 6728 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
285.2 bits(616) | 0.0 | 123/143(86%) | 0/143(0%) | Minus/Minus |
Query 1 KPRKTRLQK*APLLGYFYRYLEHYEQQLEI*ARRTHQQIQMQTKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSFCAYSEPGNARSYNALQLPPQSSRL*IILQVCRHKIPRLHNYQCNFPNCLFP*QCRSSPK*AEAF*RSP 429 KP+KTR QK*APLL YFYRYLEHYEQQLEI*A RTHQQIQMQTKP*LSYS*YSHHAKHLRPKQ*PQT+QKLSTSF AY EPGNA SYNA QLPPQSS L* ILQVC+HK P+LH+YQCN PNC F *QCR SPK*AEAF*R P Subject 6300 KPQKTRPQK*APLLDYFYRYLEHYEQQLEI*AHRTHQQIQMQTKP*LSYS*YSHHAKHLRPKQ*PQTDQKLSTSFYAYFEPGNAHSYNAPQLPPQSSHL*TILQVCKHKTPQLHSYQCNSPNCPFL*QCRFSPK*AEAF*RFP 6728
Range 8: 6765 to 6923 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.0 bits(238) | 0.0 | 48/53(91%) | 0/53(0%) | Minus/Minus |
Query 466 SL*SVPPLER*CSGKGLRTAHQNHEYQRQTSTHQVCLSSLALHTLESRA*CTF 624 SL*SVPPLER*CSG+GLRTAHQN +YQRQT THQV LSSLALHTLESRA*CTF Subject 6765 SL*SVPPLER*CSGRGLRTAHQNQKYQRQTGTHQVYLSSLALHTLESRA*CTF 6923
Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: Hai1
Sequence ID: AB277787.1 Length: 2876 Number of Matches: 7
Range 1: 557 to 1177 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
480.8 bits(1043) | 0.0 | 200/207(97%) | 0/207(0%) | Plus/Plus |
Query 3 GIFKKPQLIWERICIAREIGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWHGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNINVPREAHFIK 623 GIFKKPQLIWERICIARE+GNLENCIDNYAIEVSYAYRLGELSIGVMTEEE+EAHYNCVRFLVRNKHKMRCSIS LFEVIV*ALSVW GVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDI GFDVLFSDPYQNI++PREAHFIK Subject 557 GIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEIEAHYNCVRFLVRNKHKMRCSISSLFEVIV*ALSVWRGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDISGFDVLFSDPYQNISIPREAHFIK 1177
Range 2: 560 to 1177 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
442.8 bits(960) | 0.0 | 177/206(86%) | 0/206(0%) | Minus/Minus |
Query 6 LYEVCLPWNVDVLVRV*EQHIKTMNIRDRQVLIKYVYLPLHCTPWRVGLDVPSC*IWTVWHTCCESHERLVFRNELPY*ATFTATWNTMNNNWKFKHAEHTNKFKCRQSLD*VIHNTHTMPNT*GLNNNLKQTRN*APHFVLIPNQETHAVIMRFNFLLSHHAYR*FSKSVGIRYLDCIIINAIFQIAYFPSNADPLPNKLRLFKD 623 LYEVCLPWN DVLV V*EQHIKT NIRDRQVLIKY+YLPLHCTPWRVGLDVPSC*IWTVWHT C+SH+R V RN+LPY*ATFT TWNTMNNNWKFK+ EH NKFKCRQSLD*VIHNTHT PNT*GLN N KQTRN* PHF+LI NQETH VIMRFNFLLSHH R FSKSV IR+L+CIIINAIFQIA+F SNADPLPNKLRLFKD Subject 560 LYEVCLPWNADVLVGV*EQHIKTRNIRDRQVLIKYIYLPLHCTPWRVGLDVPSC*IWTVWHTRCKSHKRFVLRNKLPY*ATFTTTWNTMNNNWKFKYTEHANKFKCRQSLD*VIHNTHTTPNT*GLNYNFKQTRN*TPHFMLISNQETHTVIMRFNFLLSHHTNRQFSKSVSIRHLNCIIINAIFQIAHFSSNADPLPNKLRLFKD 1177
Range 3: 555 to 1178 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
381.4 bits(826) | 0.0 | 178/208(86%) | 0/208(0%) | Plus/Plus |
Query 1 RGSLKSLSLFGRGSALLGK*AIWKIALIIMQSRYLMPTDLENYL*A**LRRKLKRIITACVSWFGISTK*GAQFLVCLRLLFRP*VFGMV*VL*IT*SRLCLHLNLLVCSACLNFQLLFIVFQVAVKVA**GSSFLKTSLSWLSQQVCQTVQI*QEGTSSPTLQGVQCKGR*TYLMSTCLSLIFMVLMCCSQTLTRTSTFQGRHTS*R 624 R SLKSLSLFGRGSALL K AIWKIALIIMQ R LM TDLEN L **LRRKLKRIIT CVSWF IS K*G QFLVCL+L FRP*VFG+V*VL*IT*SRLCLHLNLL CS LNFQLLFIVFQV VKVA**GS FL+T+L WL Q+VCQTVQI*QEGTSSPTLQGVQCKGR* YLMSTCLSLIF+VLMCCSQT TRTS FQGRHTS*R Subject 555 RESLKSLSLFGRGSALLEKWAIWKIALIIMQLRCLMLTDLENCLLV**LRRKLKRIITVCVSWFEISIK*GVQFLVCLKL*FRP*VFGVV*VL*IT*SRLCLHLNLLACSVYLNFQLLFIVFQVVVKVA**GSLFLRTNLLWLLQRVCQTVQI*QEGTSSPTLQGVQCKGR*IYLMSTCLSLIFLVLMCCSQTPTRTSAFQGRHTS*R 1178
Range 4: 556 to 1179 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
378.2 bits(819) | 0.0 | 179/208(86%) | 0/208(0%) | Plus/Plus |
Query 2 GDL*KASAYLGEDLHC*GNRQFGKLH**LCNRGILCLQTWRIIYRRDD*GGS*SAL*LRAFPGSE*AQNEVLNFWFV*GYCLGLKCLAWCEYYE*LSQGFVCI*ICWCVLRA*IXXXXXXXXR*R*K*PNKGAHF*RRVFRGFHSRCARQSKSNRKVHQALLSRVCSAREDKHT**VLVCL*YSWF*CAVLRPLPEHQRSKGGTLHKD 625 G+L*KASAYLGEDLHC* N QFGKLH**LCN G+LCLQTWRI+Y DD*GG+*SAL*L AFPGS+*A NEV NF FV* Y LGLKCLAWCEYYE*LSQGFVCI*ICW VL *ISSCCS*CSR* *K*PNKGA+F* R+F GF+S CARQSKSNRKVHQALLSRVCSAREDK+T**VLVCL*Y WF*CAVLRPLPEHQ SKGGTLHKD Subject 556 GNL*KASAYLGEDLHC*RNGQFGKLH**LCN*GVLCLQTWRIVYWCDD*GGN*SAL*LCAFPGSK*A*NEVFNF*FV*SYSLGLKCLAWCEYYE*LSQGFVCI*ICWRVLCT*ISSCCS*CSR*W*K*PNKGAYF*GRIFCGFYSGCARQSKSNRKVHQALLSRVCSAREDKYT**VLVCL*YFWF*CAVLRPLPEHQHSKGGTLHKD 1179
Range 5: 555 to 1178 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
374.5 bits(811) | 0.0 | 178/208(86%) | 0/208(0%) | Minus/Minus |
Query 1 SL*SVPPLER*CSGKGLRTAHQNHEYQRQTSTHQVCLSSLALHTLESRA*CTFXXXXXXXXXXX*KPRKTRLQK*APLLGYFYRYLEHYEQQLEI*ARRTHQQIQMQTKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSFCAYSEPGNARSYNALQLPPQSSRL*IILQVCRHKIPRLHNYQCNFPNCLFP*QCRSSPK*AEAF*RSP 624 SL*SVPPLE *CSG+GLRTAHQN +YQRQTSTHQV LSSLALHTLESRA*CTFLLDLDCLAH L*KP+K R QK*APLLGYFY YLEHYEQQLEI* RT QQIQMQTKP*LSYS*YSHHAKHLRPK * QTN KL+TSF AY EPGNA SYNALQ PPQSS * ILQVC+HK P+LHNYQCNFPNC F *QCRSSPK*AEAF*R P Subject 555 SL*SVPPLEC*CSGRGLRTAHQNQKYQRQTSTHQVYLSSLALHTLESRA*CTFLLDLDCLAHPL*KPQKIRPQK*APLLGYFYHYLEHYEQQLEI*VHRTRQQIQMQTKP*LSYS*YSHHAKHLRPKL*LQTN*KLNTSFYAYFEPGNAHSYNALQFPPQSSHQ*TILQVCKHKTPQLHNYQCNFPNCPFL*QCRSSPK*AEAF*RFP 1178
Range 6: 556 to 870 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
215.5 bits(464) | 0.0 | 102/105(97%) | 0/105(0%) | Minus/Minus |
Query 2 NSNADKALTKLFIILTPCQTLKA*TITSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPISLAMQILSQIS*GFLKIP 316 NSNADKALTKLFIILTP QTLKA*TITSNK EIEHLILCLFRTRKRTQL*CAS SSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPISLAMQILSQIS*GFLKIP Subject 556 NSNADKALTKLFIILTPRQTLKA*TITSNKLEIEHLILCLFRTRKRTQL*CASISSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPISLAMQILSQIS*GFLKIP 870
Range 7: 940 to 1179 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
178.9 bits(384) | 0.0 | 76/80(95%) | 0/80(0%) | Minus/Minus |
Query 386 VFMKCASLGTLMFW*GSENSTSKP*ISETDKYSSSMFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR 625 VFMKCASLG LMFW*GSENSTSKP ISETDKYSSS+FIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSE+SSLIR Subject 940 VFMKCASLGMLMFW*GSENSTSKPEISETDKYSSSIFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEISSLIR 1179
Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: Ham1
Sequence ID: AB277788.1 Length: 2876 Number of Matches: 7
Range 1: 557 to 1177 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
480.8 bits(1043) | 0.0 | 198/207(96%) | 0/207(0%) | Plus/Plus |
Query 3 GIFKKPQLIWERICIAREIGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWHGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNINVPREAHFIK 623 GIFKKPQLIWERICIARE+GNL+NCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWHGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDE+FVAFTAGVPDSPNLTGRYIKPY+PGCAVQGKINILDEYLSVSD GFDVLFSDPYQN+++PREAHFIK Subject 557 GIFKKPQLIWERICIAREMGNLDNCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWHGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDEAFVAFTAGVPDSPNLTGRYIKPYAPGCAVQGKINILDEYLSVSDTSGFDVLFSDPYQNVSIPREAHFIK 1177
Range 2: 560 to 1174 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
430.4 bits(933) | 0.0 | 168/205(82%) | 0/205(0%) | Minus/Minus |
Query 6 YEVCLPWNVDVLVRV*EQHIKTMNIRDRQVLIKYVYLPLHCTPWRVGLDVPSC*IWTVWHTCCESHERLVFRNELPY*ATFTATWNTMNNNWKFKHAEHTNKFKCRQSLD*VIHNTHTMPNT*GLNNNLKQTRN*APHFVLIPNQETHAVIMRFNFLLSHHAYR*FSKSVGIRYLDCIIINAIFQIAYFPSNADPLPNKLRLFKD 620 YEVCL WN D+LVRV*EQHIK +IRDRQVLIKYVY PLHCTPW VGLDVPSC*IWTVWHTCCE H+ LVFRNELPY*ATFT TWNT+NNNWKFK+ +H NKFK RQS D*VIHNTHTMPNT*GLN+N KQTRN*APH VLI NQETHAVIMRFNFLLSHHAYR*F KSV IR+L+C+I+NAI Q+ +FPSNADP PN+L FKD Subject 560 YEVCLSWNADILVRV*EQHIKARSIRDRQVLIKYVYFPLHCTPWSVGLDVPSC*IWTVWHTCCEGHKSLVFRNELPY*ATFTTTWNTVNNNWKFKYTKHANKFKRRQSFD*VIHNTHTMPNT*GLNDNFKQTRN*APHLVLIANQETHAVIMRFNFLLSHHAYR*FPKSVSIRHLNCVIVNAIVQVTHFPSNADPFPNELGFFKD 1174
Range 3: 556 to 870 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
219.2 bits(472) | 0.0 | 101/105(96%) | 0/105(0%) | Minus/Minus |
Query 2 NSNADKALTKLFIILTPCQTLKA*TITSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPISLAMQILSQIS*GFLKIP 316 NSNADKALTKLFIILTPCQTLKA*TITSNKPEIEHLILCL RTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQ SKLPISLAMQILSQ+S GFLKIP Subject 556 NSNADKALTKLFIILTPCQTLKA*TITSNKPEIEHLILCLLRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQLSKLPISLAMQILSQMSWGFLKIP 870
Range 4: 940 to 1179 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
172.9 bits(371) | 0.0 | 74/80(92%) | 0/80(0%) | Minus/Minus |
Query 386 VFMKCASLGTLMFW*GSENSTSKP*ISETDKYSSSMFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR 625 VFMKCASLG L FW*GSENSTSKP +SETDKYSSSMFIFPCTAHPG *GLMYLPVRFGLSGTPAVKATK SSSEMSSLIR Subject 940 VFMKCASLGMLTFW*GSENSTSKPEVSETDKYSSSMFIFPCTAHPGA*GLMYLPVRFGLSGTPAVKATKASSSEMSSLIR 1179
Range 5: 556 to 1179 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
365.3 bits(791) | 0.0 | 172/208(83%) | 0/208(0%) | Plus/Plus |
Query 2 GDL*KASAYLGEDLHC*GNRQFGKLH**LCNRGILCLQTWRIIYRRDD*GGS*SAL*LRAFPGSE*AQNEVLNFWFV*GYCLGLKCLAWCEYYE*LSQGFVCI*ICWCVLRA*IXXXXXXXXR*R*K*PNKGAHF*RRVFRGFHSRCARQSKSNRKVHQALLSRVCSAREDKHT**VLVCL*YSWF*CAVLRPLPEHQRSKGGTLHKD 625 G+L*K A+LG+DLHC*GN G+LH* L N G+LCLQTW IIYRRDD*GGS*SAL*LRAFPGS+*AQ+EVLNFWFV* Y LGLKCLAWCEYYE*LSQ FVC+*ICW VL *ISSCCS CSR* *K*PNKGAHF*RR F G HSRCARQSKSNRKVHQAL SRVCSARE+KHT**VLVCL*Y W *CAVLRPLPE Q SK GTLHK+ Subject 556 GNL*KTPAHLGKDLHC*GNG*LGQLH*QLRN*GVLCLQTWGIIYRRDD*GGS*SAL*LRAFPGSQ*AQDEVLNFWFV*SYRLGLKCLAWCEYYE*LSQSFVCV*ICWRVLCT*ISSCCSQCSR*W*K*PNKGAHF*RRGFCGLHSRCARQSKSNRKVHQALRSRVCSARENKHT**VLVCL*YFWL*CAVLRPLPECQHSKRGTLHKN 1179
Range 6: 555 to 1178 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
364.9 bits(790) | 0.0 | 170/208(82%) | 0/208(0%) | Plus/Plus |
Query 1 RGSLKSLSLFGRGSALLGK*AIWKIALIIMQSRYLMPTDLENYL*A**LRRKLKRIITACVSWFGISTK*GAQFLVCLRLLFRP*VFGMV*VL*IT*SRLCLHLNLLVCSACLNFQLLFIVFQVAVKVA**GSSFLKTSLSWLSQQVCQTVQI*QEGTSSPTLQGVQCKGR*TYLMSTCLSLIFMVLMCCSQTLTRTSTFQGRHTS*R 624 R SLK+ S FG+GSALLGK W IAL I Q R LM TDL NYL*A**LRRKLKRIITACVSWF IST+*GAQFLVCL+L FRP*VFGMV*VL*IT*S+LCL LNLL C LNFQLLF VFQV VKVA**GSSFLKT L W SQQVCQTVQI*QEGTSSPTLQGVQCKG+*TYLMSTCLSLI + LMCCSQTLTR S FQ RHTS*+ Subject 555 RESLKNPSSFGKGSALLGKWVTWTIALTITQLRCLMLTDLGNYL*A**LRRKLKRIITACVSWFAISTR*GAQFLVCLKLSFRP*VFGMV*VL*IT*SKLCLRLNLLACFVYLNFQLLFTVFQVVVKVA**GSSFLKTRLLWPSQQVCQTVQI*QEGTSSPTLQGVQCKGK*TYLMSTCLSLILLALMCCSQTLTRMSAFQERHTS*K 1178
Range 7: 555 to 1175 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
345.6 bits(748) | 0.0 | 170/207(82%) | 0/207(0%) | Minus/Minus |
Query 1 L*SVPPLER*CSGKGLRTAHQNHEYQRQTSTHQVCLSSLALHTLESRA*CTFXXXXXXXXXXX*KPRKTRLQK*APLLGYFYRYLEHYEQQLEI*ARRTHQQIQMQTKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSFCAYSEPGNARSYNALQLPPQSSRL*IILQVCRHKIPRLHNYQCNFPNCLFP*QCRSSPK*AEAF*RSP 621 L*SVP LE * SGKGLRTAHQ+ +YQRQTSTHQVCL SLALHTLE RA*CTFLLDLDCLAHLL*+P+K RLQK*APLLGYFY YLEH EQQLEI* +T QQIQ QTK *LSYS*YSHHAKHLRPK+* QTNQKLSTS CAY EPGNARSYNALQLPPQSSRL*II QVC+HK P+L N QCN P+ FP*QCRS PK*A F*R P Subject 555 L*SVPLLEC*HSGKGLRTAHQSQKYQRQTSTHQVCLFSLALHTLERRA*CTFLLDLDCLAHLL*RPQKPRLQK*APLLGYFYHYLEHCEQQLEI*VHKTRQQIQTQTKL*LSYS*YSHHAKHLRPKR*LQTNQKLSTSSCAYCEPGNARSYNALQLPPQSSRL*IIPQVCKHKTPQLRNCQCNCPSYPFP*QCRSFPK*AGVF*RFP 1175
Grapevine rupestris stem pitting associated virus isolate CS BR, complete genome
Sequence ID: KX958435.1 Length: 8743 Number of Matches: 7
Range 1: 6302 to 6922 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
484.9 bits(1052) | 0.0 | 202/207(98%) | 0/207(0%) | Plus/Plus |
Query 3 GIFKKPQLIWERICIAREIGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWHGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNINVPREAHFIK 623 GIFKKPQLIWERICIARE+GNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVW GVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQG+INILDEYLSVSDI GFDVLFSDPYQNIN+PREAHFIK Subject 6302 GIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWRGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGRINILDEYLSVSDISGFDVLFSDPYQNINIPREAHFIK 6922
Range 2: 6305 to 6922 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
447.8 bits(971) | 0.0 | 176/206(85%) | 0/206(0%) | Minus/Minus |
Query 6 LYEVCLPWNVDVLVRV*EQHIKTMNIRDRQVLIKYVYLPLHCTPWRVGLDVPSC*IWTVWHTCCESHERLVFRNELPY*ATFTATWNTMNNNWKFKHAEHTNKFKCRQSLD*VIHNTHTMPNT*GLNNNLKQTRN*APHFVLIPNQETHAVIMRFNFLLSHHAYR*FSKSVGIRYLDCIIINAIFQIAYFPSNADPLPNKLRLFKD 623 LYEVCLPWNVDVLV V*EQH+KT N+RDRQ+LIKY+Y PLHCTPWRVGLDVPSC*IWTVWHT C+SH+RLV RNELPY ATFTATWNTM+NNWKFK+ EHTNKFKCRQSLD*VIHNTHT PNT*GLNNNLKQTRN*APHF+ I NQETH VIMR NFLLSHH YR FSKSV IR+L+C+IINAIFQIA+F SNADPLPNKLR FKD Subject 6305 LYEVCLPWNVDVLVGV*EQHVKTRNVRDRQILIKYIYPPLHCTPWRVGLDVPSC*IWTVWHTRCKSHKRLVLRNELPYQATFTATWNTMDNNWKFKYTEHTNKFKCRQSLD*VIHNTHTTPNT*GLNNNLKQTRN*APHFMFISNQETHTVIMRLNFLLSHHTYRQFSKSVSIRHLNCVIINAIFQIAHFSSNADPLPNKLRFFKD 6922
Range 3: 6304 to 6924 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
386.0 bits(836) | 0.0 | 179/207(86%) | 0/207(0%) | Plus/Plus |
Query 5 DL*KASAYLGEDLHC*GNRQFGKLH**LCNRGILCLQTWRIIYRRDD*GGS*SAL*LRAFPGSE*AQNEVLNFWFV*GYCLGLKCLAWCEYYE*LSQGFVCI*ICWCVLRA*IXXXXXXXXR*R*K*PNKGAHF*RRVFRGFHSRCARQSKSNRKVHQALLSRVCSAREDKHT**VLVCL*YSWF*CAVLRPLPEHQRSKGGTLHKD 625 +L*K SAYLGEDLHC* N QFGKLH**L N G+LCLQTWRI+YR DD*GGS* AL*L AFPGS+* NEVLNFWFV*GYCLGLKCLAWCEYYE*LSQGFVCI*ICWCVL *ISSCC *CSR*R*K*P+KGAHF* RVF GF+S CARQSKSNRKVHQALLSRVCSAREDK+T**V VCL*+ WF* AVLRPLPEHQ SKGGTLHKD Subject 6304 NL*KTSAYLGEDLHC*RNGQFGKLH**LRN*GVLCLQTWRIVYRCDD*GGS*GAL*LCAFPGSK*T*NEVLNFWFV*GYCLGLKCLAWCEYYE*LSQGFVCI*ICWCVLCT*ISSCCP*CSR*R*K*PDKGAHF*GRVFCGFYSGCARQSKSNRKVHQALLSRVCSAREDKYT**VFVCL*HFWF*RAVLRPLPEHQHSKGGTLHKD 6924
Range 4: 6301 to 6615 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
222.8 bits(480) | 0.0 | 104/105(99%) | 0/105(0%) | Minus/Minus |
Query 2 NSNADKALTKLFIILTPCQTLKA*TITSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPISLAMQILSQIS*GFLKIP 316 NSNADKALTKLFIILTP QTLKA*TITSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPISLAMQILSQIS*GFLKIP Subject 6301 NSNADKALTKLFIILTPRQTLKA*TITSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPISLAMQILSQIS*GFLKIP 6615
Range 5: 6685 to 6924 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
176.6 bits(379) | 0.0 | 75/80(94%) | 0/80(0%) | Minus/Minus |
Query 386 VFMKCASLGTLMFW*GSENSTSKP*ISETDKYSSSMFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR 625 VFMKCASLG LMFW*GSENSTSKP +SETDKYSSS+FI PCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR Subject 6685 VFMKCASLGMLMFW*GSENSTSKPEMSETDKYSSSIFILPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR 6924
Range 6: 6306 to 6923 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
377.7 bits(818) | 0.0 | 177/206(86%) | 0/206(0%) | Plus/Plus |
Query 7 SLKSLSLFGRGSALLGK*AIWKIALIIMQSRYLMPTDLENYL*A**LRRKLKRIITACVSWFGISTK*GAQFLVCLRLLFRP*VFGMV*VL*IT*SRLCLHLNLLVCSACLNFQLLFIVFQVAVKVA**GSSFLKTSLSWLSQQVCQTVQI*QEGTSSPTLQGVQCKGR*TYLMSTCLSLIFMVLMCCSQTLTRTSTFQGRHTS*R 624 SLK+LSLFGRGSALL K AIWKIALII Q R LM TDLEN L* **LRRKL+RIIT CVSWF I+ K*GAQFLVCLRLLFRP*VFG+V*VL*IT*SRLCLHLNLLVCS LNFQLL IVFQVAVKVA**GSSFL+TSL WL Q+VCQTVQI*QEGTSSPTLQGVQCKG * YLMS CLSL F+VL CCSQT TRTSTFQGRHTS*R Subject 6306 SLKNLSLFGRGSALLEKWAIWKIALIITQLRCLMLTDLENCL*V**LRRKLRRIITVCVSWFEINIK*GAQFLVCLRLLFRP*VFGVV*VL*IT*SRLCLHLNLLVCSVYLNFQLLSIVFQVAVKVA**GSSFLRTSLLWLLQRVCQTVQI*QEGTSSPTLQGVQCKGG*IYLMSICLSLTFLVLTCCSQTPTRTSTFQGRHTS*R 6923
Range 7: 6306 to 6923 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
373.1 bits(808) | 0.0 | 177/206(86%) | 0/206(0%) | Minus/Minus |
Query 7 SL*SVPPLER*CSGKGLRTAHQNHEYQRQTSTHQVCLSSLALHTLESRA*CTFXXXXXXXXXXX*KPRKTRLQK*APLLGYFYRYLEHYEQQLEI*ARRTHQQIQMQTKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSFCAYSEPGNARSYNALQLPPQSSRL*IILQVCRHKIPRLHNYQCNFPNCLFP*QCRSSPK*AEAF*R 624 SL*SVPPLE *CSG+GLRTA QN + QRQT+THQV LSSLALHTLESRA*CTFLLDLDCLAH L*KP+KTR QK*APL GYFYRYLEHY QQLEI* RTHQQIQMQTKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSF Y EPGNA SYNA QLPPQSS L* ILQVC+HK P+L NYQCNFPNC F *QCRSSPK*AE F*R Subject 6306 SL*SVPPLEC*CSGRGLRTARQNQKCQRQTNTHQVYLSSLALHTLESRA*CTFLLDLDCLAHPL*KPQKTRPQK*APLSGYFYRYLEHYGQQLEI*VHRTHQQIQMQTKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSFYVYFEPGNAHSYNAPQLPPQSSHL*TILQVCKHKTPQLRNYQCNFPNCPFL*QCRSSPK*AEVF*R 6923
Nucleotide Sequence (1158 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
753.4 | 4582.2 | 4% | 0 | 57% | AB277783.1 | |
752.5 | 4602.1 | 4% | 0 | 58% | KX274275.1 | |
726.0 | 4118.3 | 6% | 0 | 55% | AY368590.1 | |
671.9 | 2746.9 | 6% | 0 | 42% | KR054735.1 | |
668.7 | 2534.2 | 5% | 0 | 42% | AF026278.1 |
Alignments
Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OB1
Sequence ID: AB277783.1 Length: 2876 Number of Matches: 16
Range 1: 605 to 1567 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
753.4 bits(1638) | 0.0 | 312/321(97%) | 0/321(0%) | Minus/Plus |
Query 194 REMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWRVVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGRINILDEYLSVSDISGFDVLFSDPYQNVSVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPIDDRHRHW 1156 REMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALS+W VIIMNNLVKALSTFEFVG+YSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKG+INILDEYLSVSDISGFDVLFSDPYQN+SVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPIDD HW Subject 605 REMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHGVIIMNNLVKALSTFEFVGIYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPIDDWLGHW 1567
Range 2: 605 to 1567 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
720.9 bits(1567) | 0.0 | 304/321(95%) | 0/321(0%) | Plus/Minus |
Query 194 PMPMPIVNGVIVLAQFAGC*KGISLHDDQLLSMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSYLTRKFEIGIMRSR*INCLLAKAN*HTLNIQLKWRTCNHFIRPVTMQIKTKGQKVLTCIFAKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYPPFYSTARGVWLDVPSREVGSVGNAGRKGYEALVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHNTPNT*GLIYSFKQPGN*APHLVLISN*EPHTVVVCFNFLFIHHFN*QLAQPVGIGYLNCIVINAVLQVTHFT 1156 PMP PIVNGVIVLAQFAGC*KGISLHDDQ LSMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSYLTRKFEIGIMRSR*INCLLAKAN HTLNIQLKWR CNHFIRPVTMQIKTKGQKVLTCIFAKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVY P YST R VWL+VP REVGSVGNAGRKGYE LVLSDKFSY*T FTTTRNA+NNNWKSEHAINTHKLKRRQSFN*VIHNNH PNT*GLIYSFKQP N*APHLV ISN*EPHTVVVCFNFLFIHHFN*QLAQPVGIGYLNCIVINAVLQVTHFT Subject 605 PMPKPIVNGVIVLAQFAGC*KGISLHDDQFLSMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSYLTRKFEIGIMRSR*INCLLAKANQHTLNIQLKWRACNHFIRPVTMQIKTKGQKVLTCIFAKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYLPLYSTTRRVWLNVPPREVGSVGNAGRKGYETLVLSDKFSY*TAFTTTRNAVNNNWKSEHAINTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQPRN*APHLVFISN*EPHTVVVCFNFLFIHHFN*QLAQPVGIGYLNCIVINAVLQVTHFT 1567
Range 3: 940 to 1572 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
470.7 bits(1021) | 0.0 | 204/211(97%) | 0/211(0%) | Plus/Minus |
Query 189 ICQCLCRSSMG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLTF*YGSENNTSKPEMSLTDRYSSSMFILPFTAQPGEYGLMYLPERLGVSGTPAVKAMKLSSSVTSSLIK 821 + QC +SSMG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTL F*YGSENNTSKPEMSLTDRYSSSMFI PFTAQPGEYGLMYLPERLGVSGTPAVKAMKLSSSVTSSLIK Subject 940 LSQCPSQSSMG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLIF*YGSENNTSKPEMSLTDRYSSSMFIFPFTAQPGEYGLMYLPERLGVSGTPAVKAMKLSSSVTSSLIK 1572
Range 4: 603 to 962 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
264.1 bits(570) | 0.0 | 113/120(94%) | 0/120(0%) | Plus/Minus |
Query 799 Q*QVLLLNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SQHAKHLRPNL*LQTTRKLSTSSCAYF*LGTAHSCSVLQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFHE 1158 Q*QVLLLN FYHYQER EQQLEI*ARYK+PQTQT*TKL*LSYS**S HAK+LRPNL*LQTT+KLSTSSC YF*LGTAHSCSVLQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFHE Subject 603 Q*QVLLLNCFYHYQERCEQQLEI*ARYKYPQTQT*TKL*LSYS**SHHAKYLRPNL*LQTTQKLSTSSCVYF*LGTAHSCSVLQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFHE 962
Range 5: 604 to 1569 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
649.4 bits(1411) | 0.0 | 304/322(94%) | 0/322(0%) | Minus/Plus |
Query 192 S*NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*STLQLCAVPS*K*AQDEVLNFRVV*SYRLGLKCLACCDYYE*LS*SFVYV*VCGCL*RAQIXXXXXXXXXXW*K*FNKRTCH*GRELHSLYGRRSRHSQPLWKVHQAILPWLCCKREDKHT**VSVCK*HFWF*RVIF*PISKCQCSKGGSLHKVKDLQIWRKYM*VPSVLWF*FA**QV**SDYRFAI*VGC*GCANLLWQGGS*FSGCA*FRFQTSL*GTRCYI*CCYLIEIKGSDLR**ALVLHCCNKT*KEVDHHAVKCLFSNLRIGPKLSPH*RSA*ALA 1157 S*NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*STLQLCAVPS*K* QDEVLNF VV*SYRLGLK LA CDYYE*LS*SFVYV*VCG L*RAQISSCCS RSW*W*K FNKRTCH*GRE HSLYGRRSRHSQPLW+VH AIL WLCCK EDKHT**VSVCK*HFWF*RVIF*PISK QCSKGGSLHKVKDLQIWRKYM*VPSVLWF*FA**QV**SDYR AI*VGC*GCA+LLWQGGS*FSGCA*FRFQTSL*GTRCYI*CCYLIEIKGSDLR**ALVLHCCNKT*KE+DHHAVKCLFSNLRIGPKLSPH*R A ALA Subject 604 S*NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*STLQLCAVPS*K*TQDEVLNFWVV*SYRLGLKYLAWCDYYE*LS*SFVYV*VCGYL*RAQISSCCSQRSW*W*KQFNKRTCH*GREFHSLYGRRSRHSQPLWEVH*AILSWLCCKGEDKHT**VSVCK*HFWF*RVIF*PISKYQCSKGGSLHKVKDLQIWRKYM*VPSVLWF*FA**QV**SDYRLAI*VGC*GCADLLWQGGS*FSGCA*FRFQTSL*GTRCYI*CCYLIEIKGSDLR**ALVLHCCNKT*KEIDHHAVKCLFSNLRIGPKLSPH*RLAWALA 1569
Range 6: 1002 to 1568 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
432.2 bits(937) | 0.0 | 179/189(95%) | 0/189(0%) | Plus/Minus |
Query 193 ANAYADRQWGDSFGPIRRLLKRHFTA**STSFYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLVPHKEV*NRNYAQPLNQLPPCQSKLAHPQHPTQMANL*SLHQTCHYAN*NQRTEGTYMYFRQICRSLTL*SEPPLEH*HFDMGQKITRQNQKCHLQTDTHQVCLSSLLQHSQGSMA*CTFQRGWEC 759 ANA A+RQWGDSFGPIRRLLKRHFTA**S SFYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLVPHKEV*NRNYAQPLNQLPPCQSK AHPQHPTQMA+L*SLHQTCHYAN*NQRTEGTYMYFRQICRSLTL*SEPPLEH*+FDMGQKITRQNQKCHLQTDTHQVCLSS LQH+Q SMA*CT QRGWEC Subject 1002 ANAQANRQWGDSFGPIRRLLKRHFTA**SISFYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLVPHKEV*NRNYAQPLNQLPPCQSKSAHPQHPTQMASL*SLHQTCHYAN*NQRTEGTYMYFRQICRSLTL*SEPPLEH*YFDMGQKITRQNQKCHLQTDTHQVCLSSPLQHNQESMA*CTSQRGWEC 1568
Range 7: 604 to 861 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
175.2 bits(376) | 0.0 | 83/86(97%) | 0/86(0%) | Plus/Minus |
Query 900 VDKALTKLFIIITTRQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISR 1157 VDKALTKLFIIIT Q LKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISR Subject 604 VDKALTKLFIIITPCQILKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISR 861
Range 8: 867 to 1313 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
291.6 bits(630) | 0.0 | 138/149(93%) | 0/149(0%) | Minus/Plus |
Query 448 SLWVFIACSDFQLLFIAFLXXXXXXX*ENLSLRTRAS*PLRPAFPTLPTSLEGTSSHTPLAVL*KGG*TYLMSICL*VTFLVLTCYFLTHIKMSVFQGRLTS*SQRPADLAKIHVSTFCPLVLICIVTGLMK*LQVRHLSWMLRVC*FA 894 SLWVFIACSDFQLLF AFLVVVK V**ENLSLRTR S*PLRPAFPTLPTSL GT SHT L VL*+G *TYLMSICL*VTFLVLTCYFLTHIK+SVFQGRLTS*SQRPADLAKIHVSTFCPLVLICIVTGLMK*LQ RHLSWMLRVC*FA Subject 867 SLWVFIACSDFQLLFTAFLVVVKAV**ENLSLRTRVS*PLRPAFPTLPTSLGGTLSHTLLVVL*RGR*TYLMSICL*VTFLVLTCYFLTHIKISVFQGRLTS*SQRPADLAKIHVSTFCPLVLICIVTGLMK*LQARHLSWMLRVC*FA 1313
Range 9: 603 to 827 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
165.6 bits(355) | 0.0 | 71/75(95%) | 0/75(0%) | Minus/Plus |
Query 934 LVKWVTWRTALITMQLRYPMPTGWASCQLK**MKRKLKHTTTVCGS*LEISTR*GAQFPGCLKL*IRP*VFGVL* 1158 LVKWVTWRTALITMQLRYPMPTGWASCQLK**MKRKLKHTTTVCGS*LEI+TR*GAQF GCLKL*IRP*VFG++* Subject 603 LVKWVTWRTALITMQLRYPMPTGWASCQLK**MKRKLKHTTTVCGS*LEINTR*GAQFLGCLKL*IRP*VFGMV* 827
Range 10: 1359 to 1550 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
150.9 bits(323) | 0.0 | 63/64(98%) | 0/64(0%) | Minus/Plus |
Query 211 SNFLVRYEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIERS*SSCSEMPFQQPANWAKTITPLT 402 SNFLVRYEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIER+*SSCSEMPFQQPANWAKTITPLT Subject 1359 SNFLVRYEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIERN*SSCSEMPFQQPANWAKTITPLT 1550
Range 11: 1410 to 1604 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
95.0 bits(201) | 0.0 | 41/65(63%) | 0/65(0%) | Minus/Minus |
Query 2 WQI*PTYEKQHQPNAQPQRQWGDNFGPNPQLLKKQFTA**STPIYVLLHQCKTTTYHRT*DPLIS 196 WQI* + E +H NAQ RQWGD+FGP +LLK+ FTA**S YVLL QC+T+ YHR DPLIS Subject 1410 WQI*LS*EMKH*ANAQANRQWGDSFGPIRRLLKRHFTA**SISFYVLLQQCRTSAYHRRSDPLIS 1604
Range 12: 1409 to 1600 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
91.3 bits(193) | 0.0 | 41/64(64%) | 0/64(0%) | Minus/Minus |
Query 1 KYDLLTKSSTNPMPNPNDNGGIILAQIPSC*KSNSLHDDPHLSMSCCTNVKPRHIIGRRIP*SQ 192 K+D L K ST PMP P NG I+LAQ C*K SLHDD LSMSCC+NV+P IIG RIP* Q Subject 1409 KFDFLRK*STKPMPKPIVNGVIVLAQFAGC*KGISLHDDQFLSMSCCSNVEPVLIIGGRIP*FQ 1600
Range 13: 1414 to 1608 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.0 bits(190) | 0.0 | 37/65(57%) | 0/65(0%) | Minus/Minus |
Query 6 ALANMTYLRKAAPTQCPTPTTMGG*FWPKSPAAEKAIHCMMIHTYLCPVAPM*NHDISSDVGSPD 200 ++AN+T+L A +QCP+ ++MG *FWP S AEKA HCMMI+ +LC VA M*N +SS+VGS D Subject 1414 SMANLTFLGNEALSQCPSQSSMG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLD 1608
Range 14: 1409 to 1603 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.0 bits(190) | 0.0 | 41/65(63%) | 0/65(0%) | Plus/Plus |
Query 1 LRSGDPTSDDMSWFYIGATGHR*VWIIMQ*IAFSAAGDLGQNYPPIVVGVGHWVGAAFRK*VIFA 195 L+S DPTSDD WFYI AT HR IIMQ* AFSA +LGQNY PI +GHW+ A+F K V FA Subject 1409 LKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPIDDWLGHWLSASFPKKVKFA 1603
Range 15: 1411 to 1602 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
85.8 bits(181) | 0.0 | 37/64(58%) | 0/64(0%) | Plus/Plus |
Query 3 EIRGSYVR*YVVVLHWCNRT*IGVDHHAVNCFFSSWGFGPKLSPHCRWGWALGWCCFS*VGHIC 194 EI+GS +R* +VLH CN+T* +DHHAV C FS+ GPKLSPH R WAL C S* IC Subject 1411 EIKGSDLR**ALVLHCCNKT*KEIDHHAVKCLFSNLRIGPKLSPH*RLAWALA*CFIS*ESQIC 1602
Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome
Sequence ID: KX274275.1 Length: 8724 Number of Matches: 17
Range 1: 6349 to 7311 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
752.5 bits(1636) | 0.0 | 311/321(97%) | 0/321(0%) | Minus/Plus |
Query 194 REMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWRVVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGRINILDEYLSVSDISGFDVLFSDPYQNVSVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPIDDRHRHW 1156 REMGNLENCIDNYAIEVSYAYRLGEL+IEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVW VIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELVTEDE+FIAFTAGVPDTPNLSGRYIKPYSPGCAVKG+INILDEYLSVSDISGFDVLFSDPYQN+SVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHP+DD HW Subject 6349 REMGNLENCIDNYAIEVSYAYRLGELAIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELVTEDENFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPVDDWRGHW 7311
Range 2: 6349 to 7311 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
721.8 bits(1569) | 0.0 | 306/321(95%) | 0/321(0%) | Plus/Minus |
Query 194 PMPMPIVNGVIVLAQFAGC*KGISLHDDQLLSMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSYLTRKFEIGIMRSR*INCLLAKAN*HTLNIQLKWRTCNHFIRPVTMQIKTKGQKVLTCIFAKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYPPFYSTARGVWLDVPSREVGSVGNAGRKGYEALVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHNTPNT*GLIYSFKQPGN*APHLVLISN*EPHTVVVCFNFLFIHHFN*QLAQPVGIGYLNCIVINAVLQVTHFT 1156 PMP PIVNGVIVLAQFAGC*KGISLHDDQ LSMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTS+LTRKFEI IMRSR*INCLLAKAN*HTLNIQLKWRTCNHFIRPVTMQIKTKGQKVLTCIFAKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVY PFYST R VWLDVP REVG V NAGRKGYE LVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNH PNT*GLIYSFKQP N*APHLVLISN*EPHTVVVCFNFLFIHHFN QLAQPVGIGYLNCIVINAVLQVTHFT Subject 6349 PMPTPIVNGVIVLAQFAGC*KGISLHDDQFLSMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSHLTRKFEIRIMRSR*INCLLAKAN*HTLNIQLKWRTCNHFIRPVTMQIKTKGQKVLTCIFAKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYLPFYSTTRRVWLDVPPREVGCVRNAGRKGYEILVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQPRN*APHLVLISN*EPHTVVVCFNFLFIHHFNCQLAQPVGIGYLNCIVINAVLQVTHFT 7311
Range 3: 6684 to 7310 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
464.8 bits(1008) | 0.0 | 202/209(97%) | 0/209(0%) | Plus/Minus |
Query 195 QCLCRSSMG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLTF*YGSENNTSKPEMSLTDRYSSSMFILPFTAQPGEYGLMYLPERLGVSGTPAVKAMKLSSSVTSSLIK 821 QC +SS G**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTL F*YGSENNTSKPEMSLTDRYSSSMFI PFTAQPGEYGLMYLPERLGVSGTPAVKAMK SSSVTSSLIK Subject 6684 QCPRQSSTG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLIF*YGSENNTSKPEMSLTDRYSSSMFIFPFTAQPGEYGLMYLPERLGVSGTPAVKAMKFSSSVTSSLIK 7310
Range 4: 6347 to 6706 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
276.9 bits(598) | 0.0 | 117/120(98%) | 0/120(0%) | Plus/Minus |
Query 799 Q*QVLLLNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SQHAKHLRPNL*LQTTRKLSTSSCAYF*LGTAHSCSVLQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFHE 1158 Q*QVLLLNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**S HAKHLRPNL*LQTT+KLSTSSCAYF*LGTAHSCSVLQLPLHSSFQL TRPACRHRIPQLHSYQCSSPGYPFHE Subject 6347 Q*QVLLLNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*LGTAHSCSVLQLPLHSSFQLPTRPACRHRIPQLHSYQCSSPGYPFHE 6706
Range 5: 6675 to 7313 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
465.2 bits(1009) | 0.0 | 201/213(94%) | 0/213(0%) | Minus/Plus |
Query 192 *K*FNKRTCH*GRELHSLYGRRSRHSQPLWKVHQAILPWLCCKREDKHT**VSVCK*HFWF*RVIF*PISKCQCSKGGSLHKVKDLQIWRKYM*VPSVLWF*FA**QV**SDYRFAI*VGC*GCANLLWQGGS*FSGCA*FRFQTSL*GTRCYI*CCYLIEIKGSDLR**ALVLHCCNKT*KEVDHHAVKCLFSNLRIGPKLSPH*RSA*ALA 830 *K*FNKRTCH*GRE HSLYGRRS H+QPLW+VHQAIL WLCCKREDKHT**VSVCK*HFWF*RVIF*PISK QCSKGGSLHKVKDLQIWRKYM*VPSVLWF*FA**QV**SDYRFAI*VGC*GCANLLWQGGS*FSGCA*F FQTSL*G RCYI*CCYLIEIKGSDLR**ALVLHCCNKT*KE+DHHAVKCLFSNLRIGPKLSP *R A ALA Subject 6675 *K*FNKRTCH*GREFHSLYGRRS*HTQPLWEVHQAILSWLCCKREDKHT**VSVCK*HFWF*RVIF*PISKYQCSKGGSLHKVKDLQIWRKYM*VPSVLWF*FA**QV**SDYRFAI*VGC*GCANLLWQGGS*FSGCA*F*FQTSL*GARCYI*CCYLIEIKGSDLR**ALVLHCCNKT*KEIDHHAVKCLFSNLRIGPKLSPR*RLAWALA 7313
Range 6: 6348 to 6641 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
201.3 bits(433) | 0.0 | 95/98(97%) | 0/98(0%) | Minus/Plus |
Query 864 S*NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*STLQLCAVPS*K*AQDEVLNFRVV*SYRLGLKCLACCDYYE*LS*SFVYV*VCGCL*RAQI 1157 S*NG*PGELH**LCN*GILCLQAGRV N*NDE*RGS*STLQLCAVPS*K*AQDEVLNF VV*SYRLGLKCLA CDYYE*LS*SFVYV*VCGCL*RAQI Subject 6348 S*NG*PGELH**LCN*GILCLQAGRVGN*NDE*RGS*STLQLCAVPS*K*AQDEVLNFWVV*SYRLGLKCLAWCDYYE*LS*SFVYV*VCGCL*RAQI 6641
Range 7: 6746 to 7312 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
428.6 bits(929) | 0.0 | 178/189(94%) | 0/189(0%) | Plus/Minus |
Query 193 ANAYADRQWGDSFGPIRRLLKRHFTA**STSFYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLVPHKEV*NRNYAQPLNQLPPCQSKLAHPQHPTQMANL*SLHQTCHYAN*NQRTEGTYMYFRQICRSLTL*SEPPLEH*HFDMGQKITRQNQKCHLQTDTHQVCLSSLLQHSQGSMA*CTFQRGWEC 759 ANA+A+RQ GDSFGPIRRLLKRHFTA**S SFYVLLQQCRTSAYHRRSDPLISIR*QHQM*HL PHKEV*N+NYAQPLNQLPPCQSKLAHPQHPTQMANL*SLHQTCHYAN*NQRTEGTYMYFRQICRSLTL*SEPPLEH*+FDMGQKITRQNQKCHLQTDTHQVCLSSLLQH+Q SMA*CT QRGW C Subject 6746 ANAHANRQRGDSFGPIRRLLKRHFTA**SISFYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLAPHKEV*NQNYAQPLNQLPPCQSKLAHPQHPTQMANL*SLHQTCHYAN*NQRTEGTYMYFRQICRSLTL*SEPPLEH*YFDMGQKITRQNQKCHLQTDTHQVCLSSLLQHNQESMA*CTSQRGWVC 7312
Range 8: 6348 to 6605 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
174.3 bits(374) | 0.0 | 83/86(97%) | 0/86(0%) | Plus/Minus |
Query 900 VDKALTKLFIIITTRQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISR 1157 VDKALTKLFIIIT QTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISI NSPSL*A*DTSIA*LSMQFSRLPISR Subject 6348 VDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIANSPSL*A*DTSIA*LSMQFSRLPISR 6605
Range 9: 6611 to 7057 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
291.6 bits(630) | 0.0 | 141/149(95%) | 0/149(0%) | Minus/Plus |
Query 448 SLWVFIACSDFQLLFIAFLXXXXXXX*ENLSLRTRAS*PLRPAFPTLPTSLEGTSSHTPLAVL*KGG*TYLMSICL*VTFLVLTCYFLTHIKMSVFQGRLTS*SQRPADLAKIHVSTFCPLVLICIVTGLMK*LQVRHLSWMLRVC*FA 894 SLWVFIACSDFQLLFIAFLVVVKVV**ENLSLRTR S*PLRPAF T PTSL GTSSHT L VL*KG *TYLMSICL*VTFLVLTCYFLTHIK+SVFQGRLTS*SQRPADLAKIHVSTFCPLVLICIVTGLMK*LQVRHLSWMLRVC*FA Subject 6611 SLWVFIACSDFQLLFIAFLVVVKVV**ENLSLRTRIS*PLRPAFLTHPTSLGGTSSHTLLVVL*KGR*TYLMSICL*VTFLVLTCYFLTHIKISVFQGRLTS*SQRPADLAKIHVSTFCPLVLICIVTGLMK*LQVRHLSWMLRVC*FA 7057
Range 10: 6347 to 6571 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
161.9 bits(347) | 0.0 | 71/75(95%) | 0/75(0%) | Minus/Plus |
Query 934 LVKWVTWRTALITMQLRYPMPTGWASCQLK**MKRKLKHTTTVCGS*LEISTR*GAQFPGCLKL*IRP*VFGVL* 1158 LVKWVTWRTALITMQLRYPMPTGWAS QLK**MKRKLKHTTTVCGS*LEISTR*GAQF GCLKL*IRP*VFG++* Subject 6347 LVKWVTWRTALITMQLRYPMPTGWASWQLK**MKRKLKHTTTVCGS*LEISTR*GAQFLGCLKL*IRP*VFGMV* 6571
Range 11: 7103 to 7294 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
146.8 bits(314) | 0.0 | 62/64(97%) | 0/64(0%) | Minus/Plus |
Query 211 SNFLVRYEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIERS*SSCSEMPFQQPANWAKTITPLT 402 SNFLVR EVLHLMLLPY*NQGIRPPMISTGSTLLQQDIER+*SSCSEMPFQQPANWAKTITPLT Subject 7103 SNFLVRCEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIERN*SSCSEMPFQQPANWAKTITPLT 7294
Range 12: 7158 to 7349 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
93.6 bits(198) | 0.0 | 38/64(59%) | 0/64(0%) | Minus/Minus |
Query 6 LANMTYLRKAAPTQCPTPTTMGG*FWPKSPAAEKAIHCMMIHTYLCPVAPM*NHDISSDVGSPD 197 +AN+T+L AAP+QCP ++ G *FWP S AEKA HCMMI+ +LC VA M*N +SS+VGS D Subject 7158 MANLTFLENAAPSQCPRQSSTG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLD 7349
Range 13: 7153 to 7344 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
92.7 bits(196) | 0.0 | 41/64(64%) | 0/64(0%) | Minus/Minus |
Query 1 KYDLLTKSSTNPMPNPNDNGGIILAQIPSC*KSNSLHDDPHLSMSCCTNVKPRHIIGRRIP*SQ 192 K+D L K ST PMP P NG I+LAQ C*K SLHDD LSMSCC+NV+P IIG RIP* Q Subject 7153 KFDFLRKCSTKPMPTPIVNGVIVLAQFAGC*KGISLHDDQFLSMSCCSNVEPVLIIGGRIP*FQ 7344
Range 14: 7153 to 7347 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
92.3 bits(195) | 0.0 | 42/65(65%) | 0/65(0%) | Plus/Plus |
Query 1 LRSGDPTSDDMSWFYIGATGHR*VWIIMQ*IAFSAAGDLGQNYPPIVVGVGHWVGAAFRK*VIFA 195 L+S DPTSDD WFYI AT HR IIMQ* AFSA +LGQNY P+ GHW+GAAF K V FA Subject 7153 LKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPVDDWRGHWLGAAFSKKVKFA 7347
Range 15: 7155 to 7346 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
91.3 bits(193) | 0.0 | 37/64(58%) | 0/64(0%) | Plus/Plus |
Query 3 EIRGSYVR*YVVVLHWCNRT*IGVDHHAVNCFFSSWGFGPKLSPHCRWGWALGWCCFS*VGHIC 194 EI+GS +R* +VLH CN+T* +DHHAV C FS+ GPKLSP R WAL WCC * IC Subject 7155 EIKGSDLR**ALVLHCCNKT*KEIDHHAVKCLFSNLRIGPKLSPR*RLAWALAWCCIF*ESQIC 7346
Range 16: 7154 to 7348 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.4 bits(191) | 0.0 | 40/65(62%) | 0/65(0%) | Minus/Minus |
Query 2 WQI*PTYEKQHQPNAQPQRQWGDNFGPNPQLLKKQFTA**STPIYVLLHQCKTTTYHRT*DPLIS 196 WQI* + + QHQ NA RQ GD+FGP +LLK+ FTA**S YVLL QC+T+ YHR DPLIS Subject 7154 WQI*LS*KMQHQANAHANRQRGDSFGPIRRLLKRHFTA**SISFYVLLQQCRTSAYHRRSDPLIS 7348
Rupestris stem pitting associated virus strain Syrah, complete genome
Sequence ID: AY368590.1 Length: 8742 Number of Matches: 15
Range 1: 6349 to 7311 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
726.0 bits(1578) | 0.0 | 301/321(94%) | 0/321(0%) | Minus/Plus |
Query 194 REMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWRVVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGRINILDEYLSVSDISGFDVLFSDPYQNVSVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPIDDRHRHW 1156 REMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVW IIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIREL+TEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKG+INILDEYLSV+D S FDVLFSDPYQN+SVPREAHFIKSKTCRFG+NTCKYLLSFGF++HSDRSDEVITGSPFELDVEGVLICFGKEAV+LAAAHNSDFKLPCEVRG TFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*+AFSATCELGQN + IDDR HW Subject 6349 REMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHY*IIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVNDFSDFDVLFSDPYQNISVPREAHFIKSKTCRFGKNTCKYLLSFGFDVHSDRSDEVITGSPFELDVEGVLICFGKEAVNLAAAHNSDFKLPCEVRGTTFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*DAFSATCELGQNCYSIDDRLGHW 7311
Range 2: 6684 to 7310 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
433.6 bits(940) | 0.0 | 191/209(91%) | 0/209(0%) | Plus/Minus |
Query 195 QCLCRSSMG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLTF*YGSENNTSKPEMSLTDRYSSSMFILPFTAQPGEYGLMYLPERLGVSGTPAVKAMKLSSSVTSSLIK 821 QC SSM * FWPNSQVAEKA HCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNV PRTSQGSLKSELCAAAK TASLPKQISTPSTSNSNGEPVITSSDLSLC KPKDRRYLHVF PNLQVFDFMK*ASLGTL F*YGSENNTSK E S TDRYSSSMFI PFTAQPGEYGLMYLPER GVSGTPAVKAMKLSSSV SSLIK Subject 6684 QCPSLSSME*QFWPNSQVAEKASHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVVPRTSQGSLKSELCAAAKLTASLPKQISTPSTSNSNGEPVITSSDLSLCTSKPKDRRYLHVFLPNLQVFDFMK*ASLGTLIF*YGSENNTSKSEKSFTDRYSSSMFIFPFTAQPGEYGLMYLPERFGVSGTPAVKAMKLSSSVMSSLIK 7310
Range 3: 6347 to 6706 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
243.5 bits(525) | 0.0 | 104/120(87%) | 0/120(0%) | Plus/Minus |
Query 799 Q*QVLLLNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SQHAKHLRPNL*LQTTRKLSTSSCAYF*LGTAHSCSVLQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFHE 1158 Q* LL NYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**S +AKHLRPNL*LQT +KLS SSCAYF* GTAHSCS LQLPLHSSFQLTTRP CRHR PQLH+YQC+ PG PFHE Subject 6347 Q**ALLSNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SNNAKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQLPLHSSFQLTTRPTCRHRTPQLHNYQCNFPGCPFHE 6706
Range 4: 6349 to 7311 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
638.4 bits(1387) | 0.0 | 275/321(86%) | 0/321(0%) | Plus/Minus |
Query 194 PMPMPIVNGVIVLAQFAGC*KGISLHDDQLLSMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSYLTRKFEIGIMRSR*INCLLAKAN*HTLNIQLKWRTCNHFIRPVTMQIKTKGQKVLTCIFAKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYPPFYSTARGVWLDVPSREVGSVGNAGRKGYEALVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHNTPNT*GLIYSFKQPGN*APHLVLISN*EPHTVVVCFNFLFIHHFN*QLAQPVGIGYLNCIVINAVLQVTHFT 1156 PMP PIVNGV VLAQFAGC*KGISLHDDQLL MSCCSNVEPVLII GRI *FQ*GNNIKCSTSYLTRKFEI IMRS +NCLLAKAN*HTLNIQLKW TCNHFIRPVTM IKTKG KVLTCIFAK AGL*LYEVSLPWNTDILIWVR+*HVK R V +RQILI+YVY PFYST R VWLDVP R+V SVGNAGR+ YE LV S++ SY TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNN PNT*GLIYSFKQ N*A HLVLISN EPHTVVV FNFLFIHHFN*QLAQPVGIG+LNCI+INA+ QV HFT Subject 6349 PMPKPIVNGVTVLAQFAGC*KGISLHDDQLLPMSCCSNVEPVLIIRGRIS*FQ*GNNIKCSTSYLTRKFEI*IMRSCQVNCLLAKAN*HTLNIQLKW*TCNHFIRPVTMHIKTKG*KVLTCIFAKPAGL*LYEVSLPWNTDILIWVRE*HVKIRKVIHRQILIEYVYLPFYSTTRRVWLDVPPRKVWSVGNAGRESYETLVFSNELSYQTTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNLIMPNT*GLIYSFKQSRN*ASHLVLISNQEPHTVVVRFNFLFIHHFN*QLAQPVGIGHLNCIIINAIFQVAHFT 7311
Range 5: 6675 to 7313 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
398.3 bits(863) | 0.0 | 178/213(84%) | 0/213(0%) | Minus/Plus |
Query 192 *K*FNKRTCH*GRELHSLYGRRSRHSQPLWKVHQAILPWLCCKREDKHT**VSVCK*HFWF*RVIF*PISKCQCSKGGSLHKVKDLQIWRKYM*VPSVLWF*FA**QV**SDYRFAI*VGC*GCANLLWQGGS*FSGCA*FRFQTSL*GTRCYI*CCYLIEIKGSDLR**ALVLHCCNKT*KEVDHHAVKCLFSNLRIGPKLSPH*RSA*ALA 830 *K*F+KR +* RE HS +GRRSRHS+P W+VHQAIL WLCCKREDKHT *VSVC+* F F*RVI *PISK QCSKGGSLHKVKDLQ+W+KYM*VPS+LWF* A**QV**SDYRF I*VGC*GCANLLWQGGS* CA*FRFQTSL*GTR YI*CCYLIEIK SDL **ALVLHCCNKT*+EVDHHAV+CLFSNLRIGPKL H*R A ALA Subject 6675 *K*FDKRAHY*RREFHSFHGRRSRHSKPFWEVHQAILSWLCCKREDKHTR*VSVCE*LF*F*RVIL*PISKYQCSKGGSLHKVKDLQVWQKYM*VPSILWF*CA**QV**SDYRFTI*VGC*GCANLLWQGGS*LGSCA*FRFQTSL*GTRYYI*CCYLIEIKRSDL***ALVLHCCNKT*EEVDHHAVRCLFSNLRIGPKLLLH*R*AWALA 7313
Range 6: 6348 to 6641 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
188.0 bits(404) | 0.0 | 87/98(89%) | 0/98(0%) | Minus/Plus |
Query 864 S*NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*STLQLCAVPS*K*AQDEVLNFRVV*SYRLGLKCLACCDYYE*LS*SFVYV*VCGCL*RAQI 1157 S*NG PG+LH**LCN*G+LCLQ GRVVN*NDE*RGS*S LQLCAVP *K*AQDE+LNF +V*SYRLGLKCLA DYYE*LS*SFVYV*VCGCL*RAQI Subject 6348 S*NGQPGKLH**LCN*GVLCLQVGRVVN*NDE*RGS*SALQLCAVPG*K*AQDEMLNFWIV*SYRLGLKCLALLDYYE*LS*SFVYV*VCGCL*RAQI 6641
Range 7: 6746 to 7312 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
370.4 bits(802) | 0.0 | 159/189(84%) | 0/189(0%) | Plus/Minus |
Query 193 ANAYADRQWGDSFGPIRRLLKRHFTA**STSFYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLVPHKEV*NRNYAQPLNQLPPCQSKLAHPQHPTQMANL*SLHQTCHYAN*NQRTEGTYMYFRQICRSLTL*SEPPLEH*HFDMGQKITRQNQKCHLQTDTHQVCLSSLLQHSQGSMA*CTFQRGWEC 759 ANA A RQW +SFGPIRRLLKRH TA**STS YVLLQQCRTSAYH+RSD LISIR*QHQM*+LVPHKEV*N NYAQ + LPPCQSKLAHPQHPTQM NL*SLHQTCHYA+ NQR EGTYMYF Q CRSLTL*SEPPLEH*+FDMGQ+ITRQNQK H QTDTH+VCLSSLLQH+Q SMA*CT Q+G EC Subject 6746 ANAQAYRQWSNSFGPIRRLLKRHLTA**STSSYVLLQQCRTSAYHQRSDLLISIR*QHQM*YLVPHKEV*NLNYAQLPS*LPPCQSKLAHPQHPTQMVNL*SLHQTCHYAHQNQRIEGTYMYFCQTCRSLTL*SEPPLEH*YFDMGQRITRQNQKSHSQTDTHRVCLSSLLQHNQESMA*CTSQKGLEC 7312
Range 8: 6348 to 6605 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
171.1 bits(367) | 0.0 | 82/86(95%) | 0/86(0%) | Plus/Minus |
Query 900 VDKALTKLFIIITTRQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISR 1157 VDKALTKLFIII QTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSP+L*A*DTSIA*LSMQFSRLPISR Subject 6348 VDKALTKLFIII**CQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSMQFSRLPISR 6605
Range 9: 6611 to 7294 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
387.3 bits(839) | 0.0 | 198/228(87%) | 0/228(0%) | Minus/Plus |
Query 211 SLWVFIACSDFQLLFIAFLXXXXXXX*ENLSLRTRAS*PLRPAFPTLPTSLEGTSSHTPLAVL*KGG*TYLMSICL*VTFLVLTCYFLTHIKMSVFQGRLTS*SQRPADLAKIHVSTFCPLVLICIVTGLMK*LQVRHLSWMLRVC*FAXXXXXXXXXXXXXXISNFLVRYEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIERS*SSCSEMPFQQPANWAKTITPLT 894 SLWVFIACSDFQLLFIAFLVVVKVV**E+ L+TR S* RPAFPTL T L GTSSHT L VL*KG *TY MSICL*+TFL+LTCY LTHIK+SVFQGRLTS*SQRPA LAKIHVSTF PLVL+CIVTGLMK*LQV HLSWMLRVC*FALARRQL +LRII ISNFLVRYEVLHLMLLPY*NQ IRP MISTGSTLLQQDI RS*SSCSEMPFQQPANWAKT+TPLT Subject 6611 SLWVFIACSDFQLLFIAFLVVVKVV**ESSLLKTRVS*LSRPAFPTLQTFLGGTSSHTLLVVL*KGR*TYSMSICL*MTFLILTCYSLTHIKISVFQGRLTS*SQRPAGLAKIHVSTFYPLVLMCIVTGLMK*LQVHHLSWMLRVC*FALARRQLTWQLRIIQISNFLVRYEVLHLMLLPY*NQEIRPLMISTGSTLLQQDIGRS*SSCSEMPFQQPANWAKTVTPLT 7294
Range 10: 6347 to 6568 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
142.7 bits(305) | 0.0 | 62/74(84%) | 0/74(0%) | Minus/Plus |
Query 937 LVKWVTWRTALITMQLRYPMPTGWASCQLK**MKRKLKHTTTVCGS*LEISTR*GAQFPGCLKL*IRP*VFGVL 1158 LVKW TW+ ALI MQLR PMPTGWASCQLK**MKRKLK TTTVCGS LEISTR* AQF CLKL*IRP*VFG++ Subject 6347 LVKWATWKIALIIMQLRCPMPTGWASCQLK**MKRKLKRTTTVCGSWLEISTR*DAQFLDCLKL*IRP*VFGII 6568
Range 11: 7158 to 7346 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
87.7 bits(185) | 0.0 | 37/63(59%) | 0/63(0%) | Minus/Minus |
Query 6 ANMTYLRKAAPTQCPTPTTMGG*FWPKSPAAEKAIHCMMIHTYLCPVAPM*NHDISSDVGSPD 194 AN+T+L AAP+QCP+ ++M FWP S AEKA HCMMI+ +LC VA M*N +SS+VGS D Subject 7158 ANLTFLGNAAPSQCPSLSSME*QFWPNSQVAEKASHCMMINFFLCLVAAM*NQCLSSEVGSLD 7346
Range 12: 7153 to 7347 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
85.8 bits(181) | 0.0 | 41/65(63%) | 0/65(0%) | Plus/Plus |
Query 1 LRSGDPTSDDMSWFYIGATGHR*VWIIMQ*IAFSAAGDLGQNYPPIVVGVGHWVGAAFRK*VIFA 195 L+S DPTSDD WFYI AT HR IIMQ* AFSA +LGQN I +GHW+GAAF K V FA Subject 7153 LKSRDPTSDDKHWFYIAATRHRKKLIIMQ*DAFSATCELGQNCYSIDDRLGHWLGAAFPKKVKFA 7347
Range 13: 7154 to 7345 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
83.1 bits(175) | 0.0 | 38/64(59%) | 0/64(0%) | Minus/Minus |
Query 2 QI*PTYEKQHQPNAQPQRQWGDNFGPNPQLLKKQFTA**STPIYVLLHQCKTTTYHRT*DPLIS 193 QI* + E QHQ NAQ RQW ++FGP +LLK+ TA**ST YVLL QC+T+ YH+ D LIS Subject 7154 QI*LS*EMQHQANAQAYRQWSNSFGPIRRLLKRHLTA**STSSYVLLQQCRTSAYHQRSDLLIS 7345
Range 14: 7155 to 7349 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
82.6 bits(174) | 0.0 | 36/65(55%) | 0/65(0%) | Plus/Plus |
Query 3 EIRGSYVR*YVVVLHWCNRT*IGVDHHAVNCFFSSWGFGPKLSPHCRWGWALGWCCFS*VGHICQ 197 EI+ S + * +VLH CN+T* VDHHAV C FS+ GPKL H R WAL WCC S* IC+ Subject 7155 EIKRSDL***ALVLHCCNKT*EEVDHHAVRCLFSNLRIGPKLLLH*R*AWALAWCCIS*ESQICR 7349
Range 15: 7153 to 7344 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.9 bits(168) | 0.0 | 37/64(58%) | 0/64(0%) | Minus/Minus |
Query 1 KYDLLTKSSTNPMPNPNDNGGIILAQIPSC*KSNSLHDDPHLSMSCCTNVKPRHIIGRRIP*SQ 192 K+D L K ST PMP P NG +LAQ C*K SLHDD L MSCC+NV+P II RI * Q Subject 7153 KFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDDQLLPMSCCSNVEPVLIIRGRIS*FQ 7344
Grapevine rupestris stem pitting associated virus isolate GRSPaV LSL, complete genome
Sequence ID: KR054735.1 Length: 8754 Number of Matches: 18
Range 1: 6349 to 7311 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
671.9 bits(1460) | 0.0 | 271/321(84%) | 0/321(0%) | Minus/Plus |
Query 194 REMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWRVVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGRINILDEYLSVSDISGFDVLFSDPYQNVSVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPIDDRHRHW 1156 REMGNLENCIDNYAIEVSYAY+LGELS+E+M+EEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALS+W V IMNNLVKALS FEFVGV+SVL+FPVVVHSVPGSGKSSLIREL+ EDE+F+AFTAGVPD+PNL+G+YIKP+SPGCAV G+INILDEYLS+ D SGFDVLFSDPYQNVS+PREAHFIKSKTCRFGENTCKYLLSFGF + SDRSD V+ GSPFELDVEGVLICFGKEAVDLA +HNSDFKLPCEVRG+TFDVVTLLKSRDPT DD+HWFYIAATRH KKLI+MQ*+AF A C+LGQNY+P + +W Subject 6349 REMGNLENCIDNYAIEVSYAYKLGELSMEVMSEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWLGVSIMNNLVKALSEFEFVGVFSVLKFPVVVHSVPGSGKSSLIRELIAEDENFVAFTAGVPDSPNLTGKYIKPFSPGCAVPGKINILDEYLSIQDFSGFDVLFSDPYQNVSIPREAHFIKSKTCRFGENTCKYLLSFGFKVCSDRSDSVVIGSPFELDVEGVLICFGKEAVDLAVSHNSDFKLPCEVRGSTFDVVTLLKSRDPTPDDRHWFYIAATRHTKKLIVMQ*DAFPAACKLGQNYNPTHNWSGYW 7311
Range 2: 6684 to 7289 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
357.1 bits(773) | 0.0 | 157/202(78%) | 0/202(0%) | Plus/Minus |
Query 216 MG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLTF*YGSENNTSKPEMSLTDRYSSSMFILPFTAQPGEYGLMYLPERLGVSGTPAVKAMKLSSSVTSSLIK 821 +G *FWPN Q A KA HC+ INFF+CLVAAM*NQCLSS VGSLDFNKVTTSNV P TSQGSLKSELC A+STAS PKQISTPSTSNSNG+P+ T SDLSL LKPKD+RYL VFSPNLQVFDFMK ASLG LTF*YGSEN+TSKPE S DRYSS +FILP TA PGE G MY P + G+SGTPAVKA K SSS SSLIK Subject 6684 VGL*FWPNLQAAGKASHCITINFFVCLVAAM*NQCLSSGVGSLDFNKVTTSNVEPLTSQGSLKSELCETARSTASFPKQISTPSTSNSNGDPITTLSDLSLQTLKPKDKRYLQVFSPNLQVFDFMKCASLGMLTF*YGSENSTSKPEKS*MDRYSSKIFILPGTAHPGEKGFMYFPVKFGLSGTPAVKATKFSSSAISSLIK 7289
Range 3: 6351 to 6602 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
150.4 bits(322) | 0.0 | 72/84(86%) | 0/84(0%) | Plus/Minus |
Query 903 DKALTKLFIIITTRQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPIS 1154 DKALTKLFII+T Q LKA*SIASN PE+EHLILCLFLT+NRTQL* ASTSSS I SID+SPSL*A*DTSIA*LS+QFSRLPIS Subject 6351 DKALTKLFIILTPSQILKA*SIASNKPEMEHLILCLFLTKNRTQL**ASTSSSLITSIDSSPSL*A*DTSIA*LSIQFSRLPIS 6602
Range 4: 6811 to 7311 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
217.3 bits(468) | 0.0 | 93/167(56%) | 0/167(0%) | Plus/Minus |
Query 194 PMPMPIVNGVIVLAQFAGC*KGISLHDDQLLSMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSYLTRKFEIGIMRSR*INCLLAKAN*HTLNIQLKWRTCNHFIRPVTMQIKTKGQKVLTCIFAKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVY 694 P+P PIV+GVIVLAQF GC KGISLH+DQLL +SCCS+VEP+ ++GG +P* Q +N+KC T + R+FEI I+R+R I+CL +KA+*HTL+I LKW N IRP+T + K QK+L + +K AG *LYE+ LP N DILIW+ K HVKT + I I+ +Y Subject 6811 PIPRPIVSGVIVLAQFTGCWKGISLHNDQLLCVSCCSDVEPMPVVGGWVP*LQQSDNVKC*TPHFARQFEIRIVRNRQIHCLFSKAD*HTLDI*LKW*PYNDTIRPITANFEAKRQKILASVLSKPAGF*LYEMCLPRNADILIWI*KQHVKT*EILNG*IFIQNIY 7311
Range 5: 6349 to 6756 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
161.9 bits(347) | 0.0 | 72/136(53%) | 0/136(0%) | Plus/Minus |
Query 749 VGSVGNAGRKGYEALVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHNTPNT*GLIYSFKQPGN*APHLVLISN*EPHTVVVCFNFLFIHHFN*QLAQPVGIGYLNCIVINAVLQVTHFT 1156 + +V N + ++ LVL +KFSY TF TTRN + NN K +H +T+KLK QSFN*+IHN H PNT*GLI FKQ + A H VLI N EP+T+V+ F+ L H+F+ L VGI YLNCI+IN +LQ+THF+ Subject 6349 IWTVWNTCSESHKILVLGNKFSYQATFATTRNTVYNNRKFKHTEHTNKLKF*QSFN*IIHNTHTKPNT*GLINRFKQTRDGASHFVLIPNQEPNTIVMSFHLLLTHYFHR*LT*FVGIRYLNCIIINTILQITHFS 6756
Range 6: 6746 to 7309 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
163.3 bits(350) | 0.0 | 89/188(47%) | 0/188(0%) | Plus/Minus |
Query 196 NAYADRQWGDSFGPIRRLLKRHFTA**STSFYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLVPHKEV*NRNYAQPLNQLPPCQSKLAHPQHPTQMANL*SLHQTCHYAN*NQRTEGTYMYFRQICRSLTL*SEPPLEH*HFDMGQKITRQNQKCHLQTDTHQVCLSSLLQHSQGSMA*CTFQRGWEC 759 N + +WG SFGPI RLL+RH TA* STS VLLQ+CRT+A R PL S +*Q QM + K V*N+N A+P + LP QS+LAHP+H TQM L* + T H *+Q+T+ T Q CR LTL*+ PP E *HFDM K RQN + D H LS L CT +C Subject 6746 NTQTNCEWGYSFGPIYRLLERHLTA*RSTSLCVLLQRCRTNACRRGLGPLTSTK*QRQMLNPSLRKAV*NQNCAKPPDPLPLFQSRLAHPRHLTQMVTL*RHYPTYHCKL*SQKTKDTCKCSLQTCRFLTL*NVPPSEC*HFDMDLKTARQNLRNLEWIDIHPKYLSYLALRILEKRVLCTSLLNLDC 7309
Range 7: 6353 to 6697 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
135.8 bits(290) | 0.0 | 65/115(57%) | 0/115(0%) | Plus/Minus |
Query 808 VLLLNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SQHAKHLRPNL*LQTTRKLSTSSCAYF*LGTAHSCSVLQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPF 1152 VLL +YF HYQE QQ EI*A H QTQ TKL*L+YS* S AK+LRPN LQT ++ S S CAY * T H+C+ L P HS CRH+IPQLH+YQ +SP YPF Subject 6353 VLLSSYFCHYQEHCVQQQEI*AH*THQQTQILTKL*LNYS*YSHQAKYLRPNQSLQTNQRWSISFCAYS*PRTEHNCNELPPPPHSLLP*IAHLVCRHKIPQLHNYQYNSPDYPF 6697
Range 8: 7011 to 7289 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
113.8 bits(242) | 0.0 | 55/93(59%) | 0/93(0%) | Minus/Plus |
Query 216 YRFAI*VGC*GCANLLWQGGS*FSGCA*FRFQTSL*GTRCYI*CCYLIEIKGSDLR**ALVLHCCNKT*KEVDHHAVKCLFSNLRIGPKLSPH 494 YR I*V C GCANLLW+ GS G A F FQT+L I* C+ +E+KG + R ALVLH CNKT KEVD +AV+CL S+L IGPKL PH Subject 7011 YRVTI*VRCRGCANLLWKRGSGSGGFAQF*FQTALRSEGFNI*RCHFVEVKGPNPRRQALVLHRCNKTHKEVDRYAVRCLSSSL*IGPKL*PH 7289
Range 9: 6354 to 6626 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
107.8 bits(229) | 0.0 | 56/91(62%) | 0/91(0%) | Minus/Plus |
Query 879 NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*STLQLCAVPS*K*AQDEVLNFRVV*SYRLGLKCLACCDYYE*LS*SFVYV*VCGCL 1151 NG* GEL+**LCN*GILCLQ + ++E* G S+LQLC+V *+*AQ+E+L+ V*S LGLK LA C+YYE* S*SFV +*VC C+ Subject 6354 NG*SGELY**LCN*GILCLQTR*AIYGSNE*GGGGSSLQLCSVLG*E*AQNEMLHLWFV*SD*LGLKYLAWCEYYE*FS*SFVRI*VCWCV 6626
Range 10: 6678 to 6974 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
82.6 bits(174) | 0.0 | 42/99(42%) | 0/99(0%) | Minus/Plus |
Query 531 K*FNKRTCH*GRELHSLYGRRSRHSQPLWKVHQAILPWLCCKREDKHT**VSVCK*HFWF*RVIF*PISKCQCSKGGSLHKVKDLQIWRKYM*VPSVLW 827 K* +KRT GRE + R SR S+ +VH+ + + R DK+ *+S+ F*R +F ISKCQ S+GG+ HKVK+LQ+WR+++ V V W Subject 6678 K*LDKRTYCRGREFCGFHCRCSRQSKFNREVHKTLFSRMRSAR*DKYFG*ISIHSRFLRF*RAVFRSISKCQHSEGGTFHKVKNLQVWREHLQVSFVFW 6974
Range 11: 6854 to 7294 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
148.6 bits(318) | 0.0 | 86/147(59%) | 0/147(0%) | Minus/Plus |
Query 211 VLTCYFLTHIKMSVFQGRLTS*SQRPADLAKIHVSTFCPLVLICIVTGLMK*LQVRHLSWMLRVC*FAXXXXXXXXXXXXXXISNFLVRYEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIERS*SSCSEMPFQQPANWAKTITPLT 651 VLTC F HIKMS F+GR S*SQ+PA L + S FC L V G + L HLS M RVC* AL +RQ I R R I ISN L + V HL L *+QG +PP GST LQQD +RS*S CSEMPFQQP NWAKTITPLT Subject 6854 VLTCCFQIHIKMSAFRGRHIS*SQKPAGLERTLASIFCLLASKFAVIGRIVSL*GHHLS*MSRVC*SALEKRQWIWRFRTILISNCLAK*GVQHLTLSLC*SQGTQPPTTGIGSTSLQQDTQRS*SLCSEMPFQQPVNWAKTITPLT 7294
Range 12: 6347 to 6571 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.5 bits(165) | 0.0 | 43/75(57%) | 0/75(0%) | Minus/Plus |
Query 934 LVKWVTWRTALITMQLRYPMPTGWASCQLK**MKRKLKHTTTVCGS*LEISTR*GAQFPGCLKL*IRP*VFGVL* 1158 L KWV WR LI MQLRY MPT S K**++R+ K T V GS L IST+* A CLK IRP*VFG++* Subject 6347 LEKWVIWRIVLIIMQLRYLMPTN*VSYLWK**VRRRWKLITIVFGSWLGISTK*DAPSLVCLKRLIRP*VFGLV* 6571
Range 13: 6611 to 6715 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
25.4 bits(49) | 0.0 | 21/35(60%) | 0/35(0%) | Minus/Plus |
Query 790 SLWVFIACSDFQLLFIAFLXXXXXXX*ENLSLRTR 894 SL V C +F LL+ FLVV KV **ENL RTR Subject 6611 SLLVCSVCLNFLLLYTVFLVVAKVA**ENLLPRTR 6715
Range 14: 7153 to 7344 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
72.1 bits(151) | 0.0 | 30/64(47%) | 0/64(0%) | Minus/Minus |
Query 1 KYDLLTKSSTNPMPNPNDNGGIILAQIPSC*KSNSLHDDPHLSMSCCTNVKPRHIIGRRIP*SQ 192 K+DLL K +T P+P P +G I+LAQ C K SLH+D L +SCC++V+P ++G +P* Q Subject 7153 KFDLLRK*NTRPIPRPIVSGVIVLAQFTGCWKGISLHNDQLLCVSCCSDVEPMPVVGGWVP*LQ 7344
Range 15: 7153 to 7347 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
71.6 bits(150) | 0.0 | 34/65(52%) | 0/65(0%) | Plus/Plus |
Query 1 LRSGDPTSDDMSWFYIGATGHR*VWIIMQ*IAFSAAGDLGQNYPPIVVGVGHWVGAAFRK*VIFA 195 L+S DPT DD WFYI AT H I+MQ* AF AA LGQNY P G+W +F + V FA Subject 7153 LKSRDPTPDDRHWFYIAATRHTKKLIVMQ*DAFPAACKLGQNYNPTHNWSGYWSSVSFSEKVKFA 7347
Range 16: 7154 to 7354 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
65.2 bits(136) | 0.0 | 30/67(45%) | 0/67(0%) | Minus/Minus |
Query 2 RHWQI*PTYEKQHQPNAQPQRQWGDNFGPNPQLLKKQFTA**STPIYVLLHQCKTTTYHRT*DPLIS 202 R WQI*P+ + +H N Q +WG +FGP +LL++ TA* ST + VLL +C+T R PL S Subject 7154 RIWQI*PSQKMKH*TNTQTNCEWGYSFGPIYRLLERHLTA*RSTSLCVLLQRCRTNACRRGLGPLTS 7354
Range 17: 7155 to 7355 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
62.0 bits(129) | 0.0 | 30/67(45%) | 0/67(0%) | Plus/Plus |
Query 3 EIRGSYVR*YVVVLHWCNRT*IGVDHHAVNCFFSSWGFGPKLSPHCRWGWALGWCCFS*VGHICQCL 203 E++G R +VLH CN+T VD +AV C SS GPKL PH + W L C * G IC L Subject 7155 EVKGPNPRRQALVLHRCNKTHKEVDRYAVRCLSSSL*IGPKL*PHSQLVWVLV*CFIF*EGQICHIL 7355
Range 18: 7158 to 7349 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
61.6 bits(128) | 0.0 | 29/64(45%) | 0/64(0%) | Minus/Minus |
Query 6 LANMTYLRKAAPTQCPTPTTMGG*FWPKSPAAEKAIHCMMIHTYLCPVAPM*NHDISSDVGSPD 197 +AN+T+ Q P +G *FWP AA KA HC+ I+ ++C VA M*N +SS VGS D Subject 7158 MANLTFSENETLDQYPDQL*VGL*FWPNLQAAGKASHCITINFFVCLVAAM*NQCLSSGVGSLD 7349
Grapevine Rupestris stem pitting associated virus, complete genome
Sequence ID: AF026278.1 Length: 8725 Number of Matches: 17
Range 1: 6349 to 7311 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
668.7 bits(1453) | 0.0 | 271/321(84%) | 0/321(0%) | Minus/Plus |
Query 194 REMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWRVVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGRINILDEYLSVSDISGFDVLFSDPYQNVSVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPIDDRHRHW 1156 REMGNLENCIDNYAIEVSYAYRLGELSIEMM EEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALS+W + IMNNLVKALSTFEFVGV+SVL+FPVV+HSVPGSGKSSLIREL++EDE+FIAFTAGVPD+PNL+GRYIKPYSPGCAV G++NILDEYLSV D SGFDVLFSDPYQN+S+P+EAHFIKSKTCRFG NTCKYL SFGF + SD D+VI GSPF LDVEGVLICFGKEAVDLA AHNS+FKLPCEVRG+TF+VVTLLKSRDPT +D+HWFYIAATRHR+KLIIMQ*+AFSA CELG+N++ ID HW Subject 6349 REMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHYLSIMNNLVKALSTFEFVGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDKVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWLGHW 7311
Range 2: 6684 to 7310 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
329.1 bits(712) | 0.0 | 150/209(72%) | 0/209(0%) | Plus/Minus |
Query 195 QCLCRSSMG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLTF*YGSENNTSKPEMSLTDRYSSSMFILPFTAQPGEYGLMYLPERLGVSGTPAVKAMKLSSSVTSSLIK 821 QC + SM F PNSQ AEKA +CM+INF LCLVAAM*NQCLSS VGSLDF +VTT V P TSQG+L SELCA A+STASLPK ISTPSTS+ G+P +T S SL LKPK+ RYL VF+PNLQVFD MK ASLG L F YGSEN+TSKPE S TD+YSSSMF P TA PGE GLMYLP RLG+SGTPAVKAMK SSS SSLIK Subject 6684 QCPSQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSELCATARSTASLPKHISTPSTSSVKGDPTMTLSKPSLLTLKPKEERYLQVFTPNLQVFDLMKCASLGMLMFWYGSENSTSKPEKSWTDKYSSSMFTFPGTAHPGE*GLMYLPVRLGLSGTPAVKAMKFSSSEISSLIK 7310
Range 3: 6351 to 6605 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
137.6 bits(294) | 0.0 | 68/85(80%) | 0/85(0%) | Plus/Minus |
Query 900 VDKALTKLFIIITTRQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPIS 1154 VD ALTKLFII+ Q LKA*SIASN PEIEHLILCLFLT+N TQL* ASTSSS IIS+D+SPS A*+TSIA*LS+QFSRLPIS Subject 6351 VDNALTKLFIILK*CQILKA*SIASNRPEIEHLILCLFLTKNLTQL*WASTSSSVIISMDSSPSRYA*ETSIA*LSIQFSRLPIS 6605
Range 4: 6355 to 7311 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
345.2 bits(747) | 0.0 | 164/319(51%) | 0/319(0%) | Plus/Minus |
Query 194 PMPMPIVNGVIVLAQFAGC*KGISLHDDQLLSMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSYLTRKFEIGIMRSR*INCLLAKAN*HTLNIQLKWRTCNHFIRPVTMQIKTKGQKVLTCIFAKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYPPFYSTARGVWLDVPSREVGSVGNAGRKGYEALVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHNTPNT*GLIYSFKQPGN*APHLVLISN*EPHTVVVCFNFLFIHHFN*QLAQPVGIGYLNCIVINAVLQVTH 1150 PMP P VNGV+V AQFAGC*KGI LHD Q L +SC SNV+PV I+ G I *FQ ++K TS TR FE ++R+ I+CLLAKA *H NIQ K R N F++ VT +KT+G K+ I AK *L E+ L N D+L+WVR+ H+KT + Q+LIKYV+ P + T + L+VPS E+ +V N + YE L+L + Y*TTFTTTR+ MN+ WK +H NT+KLK Q FN*+IHN PNT*GLI FK N*A HL+L+ + E +T+++ +F HHFN L+QPV IG L I++N +LQVTH Subject 6355 PMPKPTVNGVMVFAQFAGC*KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVVRNGEIHCLLAKAY*HPFNIQCKRRPHNDFVQTVTANLKTEGGKIFASIHAKPTSF*LDEMCLFRNADVLVWVREQHIKT*KILDGQVLIKYVHFPRHCTPWRIRLNVPSCEIRAVWNTCCESYEILILGN*LPY*TTFTTTRHTMNDYWKFKHTENTYKLKC*QCFN*IIHNTQIMPNT*GLINRFK*A*N*ASHLMLVPDQESNTIIMGLHFFLGHHFNG*LSQPVRIGDLYRIIVNTILQVTH 7311
Range 5: 6707 to 7294 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
155.0 bits(332) | 0.0 | 102/196(52%) | 0/196(0%) | Minus/Plus |
Query 211 RTRAS*PLRPAFPTLPTSLEGTSSHTPLAVL*KGG*TYLMSICL*VTFLVLTCYFLTHIKMSVFQGRLTS*SQRPADLAKIHVSTFCPLVLICIVTGLMK*LQVRHLSWMLRVC*FAXXXXXXXXXXXXXXISNFLVRYEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIERS*SSCSEMPFQQPANWAKTITPLT 798 R R S* + F T S EGT S V +G *TYLMS C F VL C TH K S F R S SQ+ LA I + F P VL VT K L R L WML+ C*+ALARRQ I LR SN+LV+ EV L +*NQ I+P I TG TLL QD R+* SCS+MPFQQPANWAKTITPLT Subject 6707 RMRIS*LSQQVFQTALISQEGTLSLILQGVQCRGK*TYLMSTCPSKIFQVLMCCSRTHTKTSAFLKRHISSSQKLVGLA*ILANIFPPSVLRLAVTVWTKSLWGRLLHWMLKGC*YALARRQWISPLRTTLNSNYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQQPANWAKTITPLT 7294
Range 6: 6354 to 6623 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
93.6 bits(198) | 0.0 | 49/90(54%) | 0/90(0%) | Minus/Plus |
Query 882 NG*PGELH**LCN*GILCLQAGRVVN*NDE*RGS*STLQLCAVPS*K*AQDEVLNFRVV*SYRLGLKCLACCDYYE*LS*SFVYV*VCGC 1151 +G*PGEL+* LC+ G+LC+ AGR ++*ND+ S L LC + + A DE+LNFR +*S LGLK LA +YYE* S*S V +*VC C Subject 6354 DG*PGELY*QLCDRGLLCVPAGRAIH*NDDRGRSGGPL*LC*ILGQEQA*DEMLNFRPI*SD*LGLKYLALFEYYE*FS*SIVNI*VCRC 6623
Range 7: 6356 to 6691 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
110.6 bits(235) | 0.0 | 62/112(55%) | 0/112(0%) | Plus/Minus |
Query 814 LLNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SQHAKHLRPNL*LQTTRKLSTSSCAYF*LGTAHSCSVLQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYP 1149 LLNYFYHYQ YE LEI*A KH QTQ T L*L+YS* S +AK+LRPN LQ KLS SS A * H+ + L SSFQ PA HR P H+ Q +SPGYP Subject 6356 LLNYFYHYQAHYE*LLEI*AH*KHLQTQMLTML*LNYS*YSNNAKYLRPNQSLQIGLKLSISSYACS*PRI*HNYNGPPLLPRSSFQWIALPAGTHRRPLSHNCQYNSPGYP 6691
Range 8: 6764 to 7117 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.0 bits(164) | 0.0 | 50/118(42%) | 0/118(0%) | Plus/Minus |
Query 388 HKEV*NRNYAQPLNQLPPCQSKLAHPQHPTQMANL*SLHQTCHYAN*NQRTEGTYMYFRQICRSLTL*SEPPLEH*HFDMGQKITRQNQKCHLQTDTHQVCLSSLLQHSQGSMA*CTF 741 HK +* ++ AQ + LPPCQS LA QHP A L H *N+R + Y RQ + LT *+ P E * F MG + QN K +T THQVC S H+ + A*CTF Subject 6764 HKVI*IQSCAQRRDPLPPCQSILAPLQHPV*KATPQ*LCPNRHC*P*NRRRKDICKYSRQTYKFLT**NVPL*EC*CFGMGPRTAHQNLKNLGRTSTHQVCSLSPALHTLENKA*CTF 7117
Range 9: 7154 to 7309 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
63.8 bits(133) | 0.0 | 33/52(63%) | 0/52(0%) | Plus/Minus |
Query 196 NAYADRQWGDSFGPIRRLLKRHFTA**STSFYVLLQQCRTSAYHRRSDPLIS 351 NA A+ QW F PIRRLLKRH TA* S S VL QQC+TSAY D LIS Subject 7154 NAQANCQWSYGFCPIRRLLKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLIS 7309
Range 10: 7032 to 7310 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
94.1 bits(199) | 0.0 | 52/93(56%) | 0/93(0%) | Minus/Plus |
Query 195 GC*GCANLLWQGGS*FSGCA*FRFQTSL*GTRCYI*CCYLIEIKGSDLR**ALVLHCCNKT*KEVDHHAVKCLFSNLRIGPKLSPH*RSA*AL 473 GC* AN+LWQGGS CA Q +L* R * EIK S+ R *ALVLHCC KT E+D+HAV+CLFS+LRIG K H*+ A AL Subject 7032 GC*RGANMLWQGGSGSRRCAQL*IQITL*S*RFNF*RRNSFEIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFSSLRIGQKP*LH*QLAWAL 7310
Range 11: 6675 to 6980 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
72.1 bits(151) | 0.0 | 44/102(43%) | 0/102(0%) | Minus/Plus |
Query 525 *K*FNKRTCH*GRELHSLYGRRSRHSQPLWKVHQAILPWLCCKREDKHT**VSVCK*HFWF*RVIF*PISKCQCSKGGSLHKVKDLQIWRKYM*VPSVLWF* 830 *K*FNK G E HS + R SR KVH A+ +C E +HT**V V F F* + PI K Q S G+ H+VK+L +WR+Y+ + +L F* Subject 6675 *K*FNKGANFRG*EFHSFHSRCSRQP*SHRKVH*ALFSRVCSAGESEHT**VLVRPRFFRF*CAVLGPIPKHQHS*RGTFHQVKNL*VWREYLQISFLLRF* 6980
Range 12: 6347 to 6571 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
71.2 bits(149) | 0.0 | 38/75(51%) | 0/75(0%) | Minus/Plus |
Query 934 LVKWVTWRTALITMQLRYPMPTGWASCQLK**MKRKLKHTTTVCGS*LEISTR*GAQFPGCLKL*IRP*VFGVL* 1158 L +WVTWR L M+ R PM TGW S LK** ++K + V S S R* AQF LK IRP*VFG++* Subject 6347 LGRWVTWRIVLTIMR*RSPMRTGWESYPLK**PRKKWRPIIIVLDSWSGTSIR*DAQFQAYLKRLIRP*VFGII* 6571
Range 13: 7153 to 7326 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
75.3 bits(158) | 0.0 | 34/58(59%) | 0/58(0%) | Plus/Plus |
Query 1 LRSGDPTSDDMSWFYIGATGHR*VWIIMQ*IAFSAAGDLGQNYPPIVVGVGHWVGAAF 174 L+S DPT +D WFYI AT HR IIMQ* AFSAA +LG+N+ I +GHW AAF Subject 7153 LKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWLGHWACAAF 7326
Range 14: 7177 to 7344 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
64.8 bits(135) | 0.0 | 27/56(48%) | 0/56(0%) | Minus/Minus |
Query 25 KYDLLTKSSTNPMPNPNDNGGIILAQIPSC*KSNSLHDDPHLSMSCCTNVKPRHII 192 ++D L K ST+PMP P NG ++ AQ C*K LHD L +SC +NVKP I+ Subject 7177 RFDFLRKCSTSPMPKPTVNGVMVFAQFAGC*KGILLHDYQFLPVSCSSNVKPVPIL 7344
Range 15: 7158 to 7343 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
62.0 bits(129) | 0.0 | 31/62(50%) | 0/62(0%) | Minus/Minus |
Query 6 NMTYLRKAAPTQCPTPTTMGG*FWPKSPAAEKAIHCMMIHTYLCPVAPM*NHDISSDVGSPD 191 ++T AA QCP+ +M F P S AAEKA +CM+I+ LC VA M*N +SS VGS D Subject 7158 DLTSSGNAAQAQCPSQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLD 7343
Range 16: 7155 to 7343 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
57.9 bits(120) | 0.0 | 29/63(46%) | 0/63(0%) | Plus/Plus |
Query 3 EIRGSYVR*YVVVLHWCNRT*IGVDHHAVNCFFSSWGFGPKLSPHCRWGWALGWCCFS*VGHI 191 EI+ S R +VLH C +T +D+HAV C FSS G K H + WALG CC S* I Subject 7155 EIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFSSLRIGQKP*LH*QLAWALGLCCIS*GSQI 7343
Range 17: 7154 to 7327 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
55.1 bits(114) | 0.0 | 29/58(50%) | 0/58(0%) | Minus/Minus |
Query 2 EKQHQPNAQPQRQWGDNFGPNPQLLKKQFTA**STPIYVLLHQCKTTTYHRT*DPLIS 175 E QH+PNAQ QW F P +LLK+ TA* S VL QCKT+ Y D LIS Subject 7154 EMQHKPNAQANCQWSYGFCPIRRLLKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLIS 7327
Nucleotide Sequence (405 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
328.7 | 1538.2 | 33% | 2.336e-88 | 82% | AY368590.1 | |
331.4 | 1748.5 | 33% | 3.475e-89 | 94% | KX274275.1 | |
306.7 | 1047.6 | 33% | 9.758e-82 | 48% | AY881627.1 | |
305.3 | 1041.2 | 33% | 2.53e-81 | 47% | KX274277.1 | |
305.3 | 1053.6 | 37% | 2.562e-81 | 48% | KX274276.1 |
Alignments
Rupestris stem pitting associated virus strain Syrah, complete genome
Sequence ID: AY368590.1 Length: 8742 Number of Matches: 6
Range 1: 3271 to 3672 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
328.7 bits(711) | 0.0 | 132/134(99%) | 0/134(0%) | Plus/Plus |
Query 3 FPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDSALSGPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYL 404 FPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVD ALS PTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYL Subject 3271 FPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDPALSNPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYL 3672
Range 2: 3270 to 3671 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
264.1 bits(570) | 0.0 | 127/134(95%) | 0/134(0%) | Minus/Minus |
Query 2 K*LSTSTSRLPSADAMAVIMQPLRGAQG*K*FDFKHKIPHRGHSFSPNFQLTSYSGVIMISLTWCLTQNKXXXXXXXXXXSPSCFRMVGPERAESTGDSLSTNDLIPAFKAKPSVLRRKPTECQKQLPSPGTGK 403 K*LSTSTSRLPSADA+AVIMQPLRGAQG*K* DFKHKIPHRGHSFSPNFQLTSYSGVIMISLT CLTQNKAIISFSA*AFSPSCFR+VG ERA STGDSLSTNDLIPAFKA+PSVLRRKPTECQKQLPSPGTGK Subject 3270 K*LSTSTSRLPSADAIAVIMQPLRGAQG*K*LDFKHKIPHRGHSFSPNFQLTSYSGVIMISLT*CLTQNKAIISFSA*AFSPSCFRIVGFERAGSTGDSLSTNDLIPAFKARPSVLRRKPTECQKQLPSPGTGK 3671
Range 3: 3271 to 3672 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
257.2 bits(555) | 0.0 | 110/134(82%) | 0/134(0%) | Minus/Minus |
Query 3 *VIEHVYLTPSKC*CNGCNHAAIKRGTRLKMI*LQTQNST*RPLIFPKFPAHLIFWCYNDQSHMVPNAE*GNHFIFCISIFTKLLPYGWARKS*INW*FAFHERSYSCLQSQTVGAEKKAN*VPKAVTITRHRK 404 *VIEHVYLTPSKC*CN CNHAAIKRGTRLKMI L TQNST*RP I PK PAH IFW YNDQSHM+PN E*GNHFIFCISIFTKLLPY W KS IN *F FH+R YS LQS T+ A+KK N*VPKAVTITRHRK Subject 3271 *VIEHVYLTPSKC*CNSCNHAAIKRGTRLKMIGL*TQNST*RPFILPKLPAHFIFWRYNDQSHMMPNTE*GNHFIFCISIFTKLLPYSWV*KSWINR*FTFHKRPYSRLQS*TICAKKKTN*VPKAVTITRHRK 3672
Range 4: 3269 to 3673 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
245.3 bits(529) | 0.0 | 112/135(83%) | 0/135(0%) | Minus/Minus |
Query 1 ISN*ARLPHAFQVLMQWL*SCSH*EGHKVENDLTSNTKFHIEATHFPQISSSPHILVL**SVSHGA*RRIRQSFHFLHKHFHQVASVWLGPKELNQLVIRFPRTILFLPSKPNRRC*EESQLSAKSSYHHQAQEK 405 ISN*ARLPHAFQVLMQ L*SCSH*EGHKVEND T NTKFHIEA H PQ SSS HIL L**SVSH A* RIRQSFHFLHKHFHQVASV LG KEL+Q VI FP+T LF PSK + C*EE+QLSAKSSYHHQAQEK Subject 3269 ISN*ARLPHAFQVLMQ*L*SCSH*EGHKVENDWTLNTKFHIEAIHSPQTSSSLHILAL**SVSHDA*HRIRQSFHFLHKHFHQVASV*LGLKELDQPVIHFPQTTLFPPSKLDHLC*EENQLSAKSSYHHQAQEK 3673
Range 5: 3327 to 3671 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.4 bits(490) | 0.0 | 94/115(82%) | 0/115(0%) | Plus/Plus |
Query 59 HRRFGFEGRNKIVRGKRITS*FSSFGPNHTEATW*KCLCRK*NDCLILR*APCETDHYNTRI*GELEIWGK*VASMWNFVFEVKSFSTLCPS*WLHDYSHCISTWKA*GRRAQLL 403 HR FEG NK+V GK IT * SSF PN+TEATW*KCLCRK*NDCLIL *A CETDHYN RI* ELE+WG+*+ASMWNFVF+V+SFSTLCPS*WLHDYS+CISTWKA*GRRAQLL Subject 3327 HRWSSFEGGNKVVCGK*ITG*SSSFKPNYTEATW*KCLCRK*NDCLILC*ASCETDHYNARI*SELEVWGE*MASMWNFVFKVQSFSTLCPS*WLHDYSYCISTWKA*GRRAQLL 3671
Range 6: 3269 to 3673 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
215.5 bits(464) | 0.0 | 113/135(84%) | 0/135(0%) | Plus/Plus |
Query 1 LFLCLVMVTAFGTQLAFFSAPTVWL*RQE*DRSWKANHQLIQLFRAQPYGSNXXXXXXXXXXXXPYSALGTM*D*SL*HQNMR*AGNLGKMSGLYVEFCV*SQIIFNLVPLLMAA*LQPLHQHLEGVR*TCSITY 405 LFLCLVMVTAFGTQL FF A V L*R+E* R WK NH+LIQLF+ Q YGSNLVKMLMQKMK*LPYS LG M*D*SL* QNM+*AG+LG+M+GLYVEFCV*S IIFNLVPLLMAA*LQ LHQHLEGVR*TCSITY Subject 3269 LFLCLVMVTAFGTQLVFFLAQMV*L*RRE*GRLWKVNHRLIQLFQTQLYGSNLVKMLMQKMK*LPYSVLGIM*D*SL*RQNMK*AGSLGRMNGLYVEFCV*SPIIFNLVPLLMAA*LQLLHQHLEGVR*TCSITY 3673
Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome
Sequence ID: KX274275.1 Length: 8724 Number of Matches: 6
Range 1: 3271 to 3672 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
331.4 bits(717) | 0.0 | 133/134(99%) | 0/134(0%) | Plus/Plus |
Query 3 FPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDSALSGPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYL 404 FPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVD ALSGPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYL Subject 3271 FPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDPALSGPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYL 3672
Range 2: 3271 to 3669 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
312.6 bits(676) | 0.0 | 126/133(95%) | 0/133(0%) | Minus/Minus |
Query 3 VIEHVYLTPSKC*CNGCNHAAIKRGTRLKMI*LQTQNST*RPLIFPKFPAHLIFWCYNDQSHMVPNAE*GNHFIFCISIFTKLLPYGWARKS*INW*FAFHERSYSCLQSQTVGAEKKAN*VPKAVTITRHRK 401 +IEHVYLTPSKC*CNGCNHAAIKRGTRLKMI*LQTQNST*RPLIFPK PAHLIFWCYN+QSHMVPNAE*GNHFIFC+SIFTKLLPYGWARKS INW*F FHER YSCLQSQTVGAEKKAN*VPKAVTITRHRK Subject 3271 IIEHVYLTPSKC*CNGCNHAAIKRGTRLKMI*LQTQNST*RPLIFPKLPAHLIFWCYNNQSHMVPNAE*GNHFIFCVSIFTKLLPYGWARKSWINW*FTFHERPYSCLQSQTVGAEKKAN*VPKAVTITRHRK 3669
Range 3: 3269 to 3670 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
300.7 bits(650) | 0.0 | 127/134(95%) | 0/134(0%) | Minus/Minus |
Query 1 SN*ARLPHAFQVLMQWL*SCSH*EGHKVENDLTSNTKFHIEATHFPQISSSPHILVL**SVSHGA*RRIRQSFHFLHKHFHQVASVWLGPKELNQLVIRFPRTILFLPSKPNRRC*EESQLSAKSSYHHQAQEK 402 +N*ARLPHAFQVLMQWL*SCSH*EGHK ENDLTSNTKFHIEATHFPQ SSSPHILVL**SVSHGA*RRIRQSFHFL KHFHQVASVWLGPKEL+QLVI FPRT LFLPSKPNRRC*EESQLSAKSSYHHQAQEK Subject 3269 NN*ARLPHAFQVLMQWL*SCSH*EGHKAENDLTSNTKFHIEATHFPQTSSSPHILVL**SVSHGA*RRIRQSFHFLRKHFHQVASVWLGPKELDQLVIHFPRTTLFLPSKPNRRC*EESQLSAKSSYHHQAQEK 3670
Range 4: 3270 to 3671 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
281.9 bits(609) | 0.0 | 132/134(99%) | 0/134(0%) | Minus/Minus |
Query 2 K*LSTSTSRLPSADAMAVIMQPLRGAQG*K*FDFKHKIPHRGHSFSPNFQLTSYSGVIMISLTWCLTQNKXXXXXXXXXXSPSCFRMVGPERAESTGDSLSTNDLIPAFKAKPSVLRRKPTECQKQLPSPGTGK 403 K*LSTSTSRLPSADAMAVIMQPLRGAQG*K*FDFKHKIPHRGHSFSPNFQLTSYSGVI+ISLTWCLTQNKAIISFSA*AFSPSCFRMVGPERA STGDSLSTNDLIPAFKAKPSVLRRKPTECQKQLPSPGTGK Subject 3270 K*LSTSTSRLPSADAMAVIMQPLRGAQG*K*FDFKHKIPHRGHSFSPNFQLTSYSGVIIISLTWCLTQNKAIISFSA*AFSPSCFRMVGPERAGSTGDSLSTNDLIPAFKAKPSVLRRKPTECQKQLPSPGTGK 3671
Range 5: 3324 to 3668 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
264.5 bits(571) | 0.0 | 108/115(94%) | 0/115(0%) | Plus/Plus |
Query 56 QHRRFGFEGRNKIVRGKRITS*FSSFGPNHTEATW*KCLCRK*NDCLILR*APCETDHYNTRI*GELEIWGK*VASMWNFVFEVKSFSTLCPS*WLHDYSHCISTWKA*GRRAQL 400 QHRRFGFEGRNK+VRGK ITS* SSFGPNHTEATW*KCL RK*NDCLILR*APCETD+YNTRI*GELE+WGK*VASMWNFVFEVKSFS LCPS*WLHDYSHCISTWKA*GRRAQL Subject 3324 QHRRFGFEGRNKVVRGK*ITS*SSSFGPNHTEATW*KCLRRK*NDCLILR*APCETDYYNTRI*GELEVWGK*VASMWNFVFEVKSFSALCPS*WLHDYSHCISTWKA*GRRAQL 3668
Range 6: 3269 to 3667 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
257.2 bits(555) | 0.0 | 127/133(95%) | 0/133(0%) | Plus/Plus |
Query 1 LFLCLVMVTAFGTQLAFFSAPTVWL*RQE*DRSWKANHQLIQLFRAQPYGSNXXXXXXXXXXXXPYSALGTM*D*SL*HQNMR*AGNLGKMSGLYVEFCV*SQIIFNLVPLLMAA*LQPLHQHLEGVR*TCSI 399 LFLCLVMVTAFGTQLAFFSAPTVWL*RQE* RSWK NHQLIQLFRAQPYGSNLVKML QKMK*LPYSALGTM*D* L*HQNMR*AG+LGKMSGLYVEFCV*SQIIF+LVPLLMAA*LQPLHQHLEGVR*TCSI Subject 3269 LFLCLVMVTAFGTQLAFFSAPTVWL*RQE*GRSWKVNHQLIQLFRAQPYGSNLVKMLTQKMK*LPYSALGTM*D*LL*HQNMR*AGSLGKMSGLYVEFCV*SQIIFSLVPLLMAA*LQPLHQHLEGVR*TCSI 3667
Rupestris stem pitting associated virus strain BS, complete genome
Sequence ID: AY881627.1 Length: 8743 Number of Matches: 7
Range 1: 3271 to 3672 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
306.7 bits(663) | 0.0 | 122/134(91%) | 0/134(0%) | Plus/Plus |
Query 3 FPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDSALSGPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYL 404 F VPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESE V +LS PTI KQLGEN YAENEMIALFC+RHHVRLI+ITPEYEVSWKFGE+EWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYL Subject 3271 FSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESECLVSPSLSAPTIHKQLGENVYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYL 3672
Range 2: 3270 to 3671 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
213.7 bits(460) | 0.0 | 104/134(78%) | 0/134(0%) | Minus/Minus |
Query 2 K*LSTSTSRLPSADAMAVIMQPLRGAQG*K*FDFKHKIPHRGHSFSPNFQLTSYSGVIMISLTWCLTQNKXXXXXXXXXXSPSCFRMVGPERAESTGDSLSTNDLIPAFKAKPSVLRRKPTECQKQLPSPGTGK 403 +* STSTSRLP+A+AMAVIMQP GA G K*FD + +IPHRGHS SPNFQLTSYSGVI ISLTWCL QNKAIISFSA* FSPSC MVG ER T SLST D IPAFKA+PSVL +KPTECQKQLPSPGT K Subject 3270 R*FSTSTSRLPNAEAMAVIMQPFSGAHGWK*FDLRQRIPHRGHSLSPNFQLTSYSGVITISLTWCLMQNKAIISFSA*TFSPSCL*MVGAERLGLTRHSLSTKDRIPAFKARPSVLSKKPTECQKQLPSPGTEK 3671
Range 3: 3403 to 3669 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
119.3 bits(254) | 0.0 | 48/89(54%) | 0/89(0%) | Minus/Minus |
Query 135 VIEHVYLTPSKC*CNGCNHAAIKRGTRLKMI*LQTQNST*RPLIFPKFPAHLIFWCYNDQSHMVPNAE*GNHFIFCISIFTKLLPYGWA 401 +I+HV TP +C* NGC+HA I+ G L++I* +T+NST* PL PK P IFWC + Q HMVPNA+*GNH I I+I ++L GW+ Subject 3403 IIQHVNFTPPQC*SNGCDHATIQWGAWLEVI*FKTKNST*GPLTLPKLPTDFIFWCDHYQPHMVPNAK*GNHLILGINILSQLFVNGWS 3669
Range 4: 3271 to 3378 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
45.1 bits(92) | 0.0 | 18/36(50%) | 0/36(0%) | Minus/Minus |
Query 3 FAFHERSYSCLQSQTVGAEKKAN*VPKAVTITRHRK 110 F H+RS + L +T+ AE K +*+PK +TITRHR+ Subject 3271 FTLHKRSNTSL*GKTISAE*KTD*MPKTITITRHRE 3378
Range 5: 3269 to 3667 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
130.7 bits(279) | 0.0 | 64/133(48%) | 0/133(0%) | Minus/Minus |
Query 1 N*ARLPHAFQVLMQWL*SCSH*EGHKVENDLTSNTKFHIEATHFPQISSSPHILVL**SVSHGA*RRIRQSFHFLHKHFHQVASVWLGPKELNQLVIRFPRTILFLPSKPNRRC*EESQLSAKSSYHHQAQEK 399 N AR HA +L QWL*SC+H G V +DL + +FHI ATH PQ S+ HILV S SHGA* +IRQS H HKH V WL + L+ L I P+ I + P + + +C* +++L+AK++YHHQAQ + Subject 3269 NSARQLHASPMLKQWL*SCNHSVGRMVGSDLI*DKEFHIGATHSPQTSN*LHILV*SLSASHGA*CKIRQSSHSRHKHSLPVVCEWLELRGLDLLGIHSPQKIEYQPLRQDHQC*VKNRLNAKNNYHHQAQRR 3667
Range 6: 3324 to 3668 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.9 bits(264) | 0.0 | 56/115(49%) | 0/115(0%) | Plus/Plus |
Query 56 QHRRFGFEGRNKIVRGKRITS*FSSFGPNHTEATW*KCLCRK*NDCLILR*APCETDHYNTRI*GELEIWGK*VASMWNFVFEVKSFSTLCPS*WLHDYSHCISTWKA*GRRAQL 400 QH +G I G+ + S NH++ T +CLCR+*+DCLIL *APCE D +TRI* +LE+WG+*VA MWN + +KS T+ P+ WLHD+SHC S +A* RA+L Subject 3324 QH*WSCLKGWYSIFCGE*MPSKSKPLSSNHSQTTGRECLCRE*DDCLILH*APCEADSDHTRI*SQLEVWGE*VAPMWNSLS*IKSLPTMRPTEWLHDHSHCFSIGEA*S*RAEL 3668
Range 7: 3275 to 3661 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
108.3 bits(230) | 0.0 | 66/129(51%) | 0/129(0%) | Plus/Plus |
Query 7 LCLVMVTAFGTQLAFFSAPTVWL*RQE*DRSWKANHQLIQLFRAQPYGSNXXXXXXXXXXXXPYSALGTM*D*SL*HQNMR*AGNLGKMSGLYVEFCV*SQIIFNLVPLLMAA*LQPLHQHLEGVR*TC 393 LCLVMV FG Q F+SA V *R D W+ N +Q + QP+ +N +M M +M+*LPY ALGTM* * HQNM+ G+LG++SG YVEF V +QI N P M A* QPL QH GV+ TC Subject 3275 LCLVMVIVFGIQSVFYSALMVLP*RLVFDLLWRVNA**VQASQLQPFTNNWERMFMPRMR*LPYFALGTM*G***SHQNMKSVGSLGRVSGPYVEFFVLNQITSNHAPH*MVA*SQPLLQHWGGVKLTC 3661
Grapevine rupestris stem pitting associated virus isolate SK30, complete genome
Sequence ID: KX274277.1 Length: 8724 Number of Matches: 7
Range 1: 3271 to 3672 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
305.3 bits(660) | 0.0 | 122/134(91%) | 0/134(0%) | Plus/Plus |
Query 3 FPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDSALSGPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYL 404 F VPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESE V LS PTI KQLGEN YAENEMIALFC+RHHVRLI+ITPEYEVSWKFGE+EWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYL Subject 3271 FSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESECLVSPNLSAPTIHKQLGENVYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYL 3672
Range 2: 3270 to 3671 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
211.8 bits(456) | 0.0 | 103/134(77%) | 0/134(0%) | Minus/Minus |
Query 2 K*LSTSTSRLPSADAMAVIMQPLRGAQG*K*FDFKHKIPHRGHSFSPNFQLTSYSGVIMISLTWCLTQNKXXXXXXXXXXSPSCFRMVGPERAESTGDSLSTNDLIPAFKAKPSVLRRKPTECQKQLPSPGTGK 403 +* STSTSRLP+A+AMAVIMQP GA G K*FD + +IPHRGHS SPNFQLTSYSGVI ISLTWCL QNKAIISFSA* FSP+C MVG ER T SLST D IPAFKA+PSVL +KPTECQKQLPSPGT K Subject 3270 R*FSTSTSRLPNAEAMAVIMQPFSGAHGWK*FDLRQRIPHRGHSLSPNFQLTSYSGVITISLTWCLMQNKAIISFSA*TFSPNCL*MVGAERFGLTRHSLSTKDRIPAFKARPSVLSKKPTECQKQLPSPGTEK 3671
Range 3: 3403 to 3669 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
119.3 bits(254) | 0.0 | 48/89(54%) | 0/89(0%) | Minus/Minus |
Query 135 VIEHVYLTPSKC*CNGCNHAAIKRGTRLKMI*LQTQNST*RPLIFPKFPAHLIFWCYNDQSHMVPNAE*GNHFIFCISIFTKLLPYGWA 401 +I+HV TP +C* NGC+HA I+ G L++I* +T+NST* PL PK P IFWC + Q HMVPNA+*GNH I I+I ++L GW+ Subject 3403 IIQHVNFTPPQC*SNGCDHATIQWGAWLEVI*FKTKNST*GPLTLPKLPTDFIFWCDHYQPHMVPNAK*GNHLILGINILSQLFVNGWS 3669
Range 4: 3271 to 3378 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
45.1 bits(92) | 0.0 | 18/36(50%) | 0/36(0%) | Minus/Minus |
Query 3 FAFHERSYSCLQSQTVGAEKKAN*VPKAVTITRHRK 110 F H+RS + L +T+ AE K +*+PK +TITRHR+ Subject 3271 FTLHKRSNTSL*GKTISAE*KTD*MPKTITITRHRE 3378
Range 5: 3269 to 3667 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
130.3 bits(278) | 0.0 | 63/133(47%) | 0/133(0%) | Minus/Minus |
Query 1 N*ARLPHAFQVLMQWL*SCSH*EGHKVENDLTSNTKFHIEATHFPQISSSPHILVL**SVSHGA*RRIRQSFHFLHKHFHQVASVWLGPKELNQLVIRFPRTILFLPSKPNRRC*EESQLSAKSSYHHQAQEK 399 N AR HA +L QWL*SC+H G V +DL + +FHI ATH PQ S+ HILV S SHGA* +IRQS H HKH + WL + L+ L I P+ I + P + + +C* +++L+AK++YHHQAQ + Subject 3269 NSARQLHASPMLKQWL*SCNHSVGRMVGSDLI*DKEFHIGATHSPQTSN*LHILV*SLSASHGA*CKIRQSSHSRHKHSLPIVCEWLELRGLDLLGIHSPQKIEYQPLRQDHQC*VKNRLNAKNNYHHQAQRR 3667
Range 6: 3324 to 3668 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
121.1 bits(258) | 0.0 | 55/115(48%) | 0/115(0%) | Plus/Plus |
Query 56 QHRRFGFEGRNKIVRGKRITS*FSSFGPNHTEATW*KCLCRK*NDCLILR*APCETDHYNTRI*GELEIWGK*VASMWNFVFEVKSFSTLCPS*WLHDYSHCISTWKA*GRRAQL 400 QH +G I G+ + S NH++ +CLCR+*+DCLIL *APCE D +TRI* +LE+WG+*VA MWN + +KS T+ P+ WLHD+SHC S +A* RA+L Subject 3324 QH*WSCLKGWYSIFCGE*MPSKSKPLSSNHSQTIGRECLCRE*DDCLILH*APCEADSDHTRI*SQLEVWGE*VAPMWNSLS*IKSLPTMRPTEWLHDHSHCFSIGEA*S*RAEL 3668
Range 7: 3275 to 3661 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
108.3 bits(230) | 0.0 | 66/129(51%) | 0/129(0%) | Plus/Plus |
Query 7 LCLVMVTAFGTQLAFFSAPTVWL*RQE*DRSWKANHQLIQLFRAQPYGSNXXXXXXXXXXXXPYSALGTM*D*SL*HQNMR*AGNLGKMSGLYVEFCV*SQIIFNLVPLLMAA*LQPLHQHLEGVR*TC 393 LCLVMV FG Q F+SA V *R D W+ N +Q + QP+ +N +M M +M+*LPY ALGTM* * HQNM+ G+LG++SG YVEF V +QI N P M A* QPL QH GV+ TC Subject 3275 LCLVMVIVFGIQSVFYSALMVLP*RLVFDLLWRVNA**VQTSQLQPFTNNWERMFMPRMR*LPYFALGTM*G***SHQNMKSVGSLGRVSGPYVEFFVLNQITSNHAPH*MVA*SQPLLQHWGGVKLTC 3661
Grapevine rupestris stem pitting associated virus isolate SK704 C, complete genome
Sequence ID: KX274276.1 Length: 8726 Number of Matches: 7
Range 1: 3272 to 3673 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
305.3 bits(660) | 0.0 | 123/134(92%) | 0/134(0%) | Plus/Plus |
Query 3 FPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDSALSGPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYL 404 F VPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESE V S LS PTI KQL ENAYAENEMIALFCVRHHVRLI++TPEYEVSWKFGE+EWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYL Subject 3272 FSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESERLVSSDLSAPTISKQLEENAYAENEMIALFCVRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYL 3673
Range 2: 3271 to 3672 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
207.7 bits(447) | 0.0 | 100/134(75%) | 0/134(0%) | Minus/Minus |
Query 2 K*LSTSTSRLPSADAMAVIMQPLRGAQG*K*FDFKHKIPHRGHSFSPNFQLTSYSGVIMISLTWCLTQNKXXXXXXXXXXSPSCFRMVGPERAESTGDSLSTNDLIPAFKAKPSVLRRKPTECQKQLPSPGTGK 403 +* +TSTSRLPSA+AMAVIMQP GAQG K* DF+ +IPHRGHS SPNFQLTSYSGV ISLTWC TQN AIISFSA*AFS +C +VG ER+E T SLST D +PAF+A+PSVL +KPTECQKQLPSPGT K Subject 3271 R*FNTSTSRLPSAEAMAVIMQPFNGAQGWK*LDFRQRIPHRGHSLSPNFQLTSYSGVTTISLTWCRTQNNAIISFSA*AFSSNCLEIVGAERSELTRRSLSTKDRMPAFRARPSVLSKKPTECQKQLPSPGTEK 3672
Range 3: 3278 to 3670 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
164.2 bits(352) | 0.0 | 70/131(53%) | 0/131(0%) | Minus/Minus |
Query 9 VIEHVYLTPSKC*CNGCNHAAIKRGTRLKMI*LQTQNST*RPLIFPKFPAHLIFWCYNDQSHMVPNAE*GNHFIFCISIFTKLLPYGWARKS*INW*FAFHERSYSCLQSQTVGAEKKAN*VPKAVTITRH 401 +I H+ TP K * NGC+HA I+ G RL++I LQ +NST*RPL FPKFP + IFWCY+ Q ++VP+ +* NHFIF I I +L W+ K * N F FHERS + LQS+T+ E++ N*+PKA+ ITR+ Subject 3278 II*HINFTPPKR*GNGCDHATIQWGARLEVIGLQAKNST*RPLTFPKFPTNFIFWCYHYQPYVVPDTK*CNHFIFSIGILLQLFRNSWS*KI*TNQAFTFHERSNAGLQSKTISTEQETN*MPKAIAITRY 3670
Range 4: 3270 to 3650 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
133.0 bits(284) | 0.0 | 64/127(50%) | 0/127(0%) | Minus/Minus |
Query 1 HAFQVLMQWL*SCSH*EGHKVENDLTSNTKFHIEATHFPQISSSPHILVL**SVSHGA*RRIRQSFHFLHKHFHQVASVWLGPKELNQLVIRFPRTILFLPSKPNRRC*EESQLSAKSSYHHQAQEK 381 HA Q L QWL*SC+H G K +D TS +FHIEATHFPQIS+ HILVL S GA +I QSFHF H+H + L K+LN + FPR I PS+ + + * +QL+AKS+ HHQ + K Subject 3270 HASQALRQWL*SCNHSMGRKAGSDWTSGKEFHIEATHFPQISN*LHILVLPLSALRGAGHKIMQSFHFQHRHSPPIV*K*LELKDLN*PGVHFPRKIECRPSEQDHQY*ARNQLNAKSNCHHQVRRK 3650
Range 5: 3346 to 3651 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
127.5 bits(272) | 0.0 | 59/102(58%) | 0/102(0%) | Plus/Plus |
Query 77 EGRNKIVRGKRITS*FSSFGPNHTEATW*KCLCRK*NDCLILR*APCETDHYNTRI*GELEIWGK*VASMWNFVFEVKSFSTLCPS*WLHDYSHCISTWKA* 382 EGR+ I RGK *F SF N+ +CLC K*NDC+IL AP + D NTRI* LEIWGK*VASMWN + EV+S L P WLHD+SHC+S W+A* Subject 3346 EGRHSIFRGK*TPG*FRSFSSNYF*TIGGECLC*K*NDCIILCPAPRKADSGNTRI*S*LEIWGK*VASMWNSLPEVQSLPALRPIEWLHDHSHCLSAWEA* 3651
Range 6: 3465 to 3662 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
70.7 bits(148) | 0.0 | 38/66(58%) | 0/66(0%) | Plus/Plus |
Query 196 YSALGTM*D*SL*HQNMR*AGNLGKMSGLYVEFCV*SQIIFNLVPLLMAA*LQPLHQHLEGVR*TC 393 Y GT * * *HQNM+ GNLGK+SGLYVEF *S I +L P M A* QPL Q L GV+ C Subject 3465 YFVSGTT*G**W*HQNMKLVGNLGKVSGLYVEFFA*SPITSSLAPH*MVA*SQPLPQRLGGVKLMC 3662
Nucleotide Sequence (544 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
361.7 | 1953.3 | 26% | 4.26e-98 | 94% | AB277784.1 | |
357.6 | 1958.5 | 24% | 7.427e-97 | 92% | FR691076.1 | |
352.1 | 1448.8 | 26% | 3.358e-95 | 62% | AF026278.1 | |
352.1 | 1441.5 | 26% | 3.358e-95 | 63% | AF057136.1 | |
352.1 | 1441.5 | 26% | 3.358e-95 | 63% | NC_001948.1 |
Alignments
Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OE8
Sequence ID: AB277784.1 Length: 2876 Number of Matches: 9
Range 1: 1070 to 1519 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
361.7 bits(783) | 0.0 | 150/150(100%) | 0/150(0%) | Minus/Plus |
Query 93 NILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHRKKLVIMQ*NAFSAAC 542 NILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHRKKLVIMQ*NAFSAAC Subject 1070 NILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHRKKLVIMQ*NAFSAAC 1519
Range 2: 1070 to 1522 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
340.1 bits(736) | 0.0 | 144/151(95%) | 0/151(0%) | Plus/Minus |
Query 90 IAGC*KGILLHNDQFLPMSCGSDVKPVPVLWGWVS*FQKGYHIEG*TSNLTRQLEFRVVRNSEIYRLLAKTYQHPFNI*SEGRSHNDVVQPVAANFKTERGKVFASVHTKPTSFGLNEMRLFWNTDILVRV*KQYIKTRNVLNGQVLIKYV 542 +AGC*KGILLHNDQFLPMSCGSDVKPVPVLWGWVS*FQKGYHIEG*TSNLTR LEFRVVRNSEIYRLLAKTYQHPFNI*SEGRSHNDVVQPVAANF+TERGKVFASVHTKPTS LNEMRLF NTDILVRV*KQYIKTRNVLNGQVLIKY+ Subject 1070 LAGC*KGILLHNDQFLPMSCGSDVKPVPVLWGWVS*FQKGYHIEG*TSNLTR*LEFRVVRNSEIYRLLAKTYQHPFNI*SEGRSHNDVVQPVAANFETERGKVFASVHTKPTSLRLNEMRLFGNTDILVRV*KQYIKTRNVLNGQVLIKYI 1522
Range 3: 1069 to 1530 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
320.4 bits(693) | 0.0 | 144/154(94%) | 0/154(0%) | Minus/Plus |
Query 82 KHT**VLVRSRHFGF*CTVFRPVPEYQYSKRGAFH*VQNL*VWCEHLQIPFLFXXXXXXXXXXXRHCGIALHSRC*RGADMFWQGGGRSRCCAQL*IQVAV*GSRFNLQCGNPFEIKRPNPRGQALVLHRCHKT*EEIGHYAVKCLFSSLLLSK 543 ++T**VLVRSRHFGF*CTVFRPVPEYQYS+RGAFH*V +L*VWCEHLQIPFLFRF S*QRRAGRRHCGIALHSRC*RGADMFWQGGGRSRCCAQL*IQV V*GSRFNLQCGNPFEIKRPNPRGQALVLHRCHKT*EEIGHYAVKCLFSSLL+ + Subject 1069 EYT**VLVRSRHFGF*CTVFRPVPEYQYSQRGAFH*V*DL*VWCEHLQIPFLFRFQS*QRRAGRRHCGIALHSRC*RGADMFWQGGGRSRCCAQL*IQVTV*GSRFNLQCGNPFEIKRPNPRGQALVLHRCHKT*EEIGHYAVKCLFSSLLIGQ 1530
Range 4: 1273 to 1521 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.4 bits(418) | 0.0 | 83/83(100%) | 0/83(0%) | Plus/Minus |
Query 91 *QAAEKAFYCIMTNFFLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPRTSHGNLNSELCATARSTASLPKHISTPSTSRVKGD 339 *QAAEKAFYCIMTNFFLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPRTSHGNLNSELCATARSTASLPKHISTPSTSRVKGD Subject 1273 *QAAEKAFYCIMTNFFLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPRTSHGNLNSELCATARSTASLPKHISTPSTSRVKGD 1521
Range 5: 1069 to 1224 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
121.1 bits(258) | 0.0 | 50/52(96%) | 0/52(0%) | Plus/Minus |
Query 388 EERYLQVFTPNLQVLDLMKCASFGILIFWYGSENSTSKPEMS*TDKYSSSMF 543 EERYLQVFTPNLQVLDLMKCAS GILIFWYGSENSTSKPEMS*TDKYSSS+F Subject 1069 EERYLQVFTPNLQVLDLMKCASLGILIFWYGSENSTSKPEMS*TDKYSSSIF 1224
Range 6: 1074 to 1313 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
177.5 bits(381) | 0.0 | 76/80(95%) | 0/80(0%) | Minus/Plus |
Query 299 YLMSTCPFKTFRVLMYCFQTRTRISVFQKRRISLSPKLVGLV*TLANTFPLSVLKLAATGWTTSLWDRPSL*MLKGC*YV 538 YLMSTCPFKTFRVLMYCFQTRTRISVF KRRISLS +LVGLV*TLANTFPLSV KLAATGWTTSLWDRPSL*MLKGC*YV Subject 1074 YLMSTCPFKTFRVLMYCFQTRTRISVFPKRRISLSLRLVGLV*TLANTFPLSVSKLAATGWTTSLWDRPSL*MLKGC*YV 1313
Range 7: 1356 to 1520 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
134.4 bits(287) | 0.0 | 54/55(98%) | 0/55(0%) | Minus/Plus |
Query 92 NSSCRVRFEVQPSMW*PF*NQETQPQRTGTGFTSLPQDIGRNWSLCSKMPFQQPA 256 NSS RVRFEVQPSMW*PF*NQETQPQRTGTGFTSLPQDIGRNWSLCSKMPFQQPA Subject 1356 NSSYRVRFEVQPSMW*PF*NQETQPQRTGTGFTSLPQDIGRNWSLCSKMPFQQPA 1520
Range 8: 1284 to 1520 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
188.0 bits(404) | 0.0 | 78/79(99%) | 0/79(0%) | Plus/Minus |
Query 92 SRLLKRHFTA**PISSYVLWQRCKTSACPLGLGLLISKGLPH*RLNLEPHTAT*IQSCAQQRDLPPPCQNISAPLQHLE 328 SRLLKRHFTA**PISSYVLWQRCKTSACPLGLGLLISKGLPH*RLNLEPHT T*IQSCAQQRDLPPPCQNISAPLQHLE Subject 1284 SRLLKRHFTA**PISSYVLWQRCKTSACPLGLGLLISKGLPH*RLNLEPHTVT*IQSCAQQRDLPPPCQNISAPLQHLE 1520
Range 9: 1074 to 1226 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
115.6 bits(246) | 0.0 | 48/51(94%) | 0/51(0%) | Plus/Minus |
Query 386 KRKGICKCSHQTYKFWT**NAPLLEY*YSGTGLKTVHQNPKCLERTSTHQV 538 KRKGICKCSHQTYK T**NAPL EY*YSGTGLKTVHQNPKCLERTSTHQV Subject 1074 KRKGICKCSHQTYKS*T**NAPLWEY*YSGTGLKTVHQNPKCLERTSTHQV 1226
Grapevine rupestris stem pitting associated virus complete genome, genomic RNA, isolate GRSPaV MG
Sequence ID: FR691076.1 Length: 8749 Number of Matches: 10
Range 1: 6814 to 7263 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
357.6 bits(774) | 0.0 | 148/150(99%) | 0/150(0%) | Minus/Plus |
Query 93 NILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHRKKLVIMQ*NAFSAAC 542 NILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSP TLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPED+HWFYIAATRHRKKLVIMQ*NAFSAAC Subject 6814 NILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPLTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDKHWFYIAATRHRKKLVIMQ*NAFSAAC 7263
Range 2: 6814 to 7266 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
333.7 bits(722) | 0.0 | 142/151(94%) | 0/151(0%) | Plus/Minus |
Query 90 IAGC*KGILLHNDQFLPMSCGSDVKPVPVLWGWVS*FQKGYHIEG*TSNLTRQLEFRVVRNSEIYRLLAKTYQHPFNI*SEGRSHNDVVQPVAANFKTERGKVFASVHTKPTSFGLNEMRLFWNTDILVRV*KQYIKTRNVLNGQVLIKYV 542 +AGC*KGILLHNDQFLPMSCGSDVKPV VLWGWVS*FQKGYHIEG*TSNLTRQLEFRVV NSEIYRLLAKTYQHPFNI*SEG SHNDVVQPVA NF+TERGKVFASVHTKPTS GLNEMRLF NTDILVRV*KQYIKTRNVLNGQVLIKY+ Subject 6814 LAGC*KGILLHNDQFLPMSCGSDVKPVLVLWGWVS*FQKGYHIEG*TSNLTRQLEFRVVCNSEIYRLLAKTYQHPFNI*SEG*SHNDVVQPVATNFETERGKVFASVHTKPTSLGLNEMRLFGNTDILVRV*KQYIKTRNVLNGQVLIKYI 7266
Range 3: 7008 to 7265 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
207.3 bits(446) | 0.0 | 83/86(97%) | 0/86(0%) | Minus/Plus |
Query 91 HCGIALHSRC*RGADMFWQGGGRSRCCAQL*IQVAV*GSRFNLQCGNPFEIKRPNPRGQALVLHRCHKT*EEIGHYAVKCLFSSLL 348 HCGI HSRC*RGADMFWQGGGRSRCC QL*IQVAV*GSRFNLQCGNPFEIKRPNPRGQALVLHRCHKT*EEIGHYAVKCLFSSLL Subject 7008 HCGITPHSRC*RGADMFWQGGGRSRCCTQL*IQVAV*GSRFNLQCGNPFEIKRPNPRGQALVLHRCHKT*EEIGHYAVKCLFSSLL 7265
Range 4: 6813 to 6971 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
120.7 bits(257) | 0.0 | 49/53(92%) | 0/53(0%) | Minus/Plus |
Query 385 KHT**VLVRSRHFGF*CTVFRPVPEYQYSKRGAFH*VQNL*VWCEHLQIPFLF 543 ++T**VLVRSRHFGF*CTVFRPVPEYQYS+RGAFH*VQ+L*VWCEHLQIPFLF Subject 6813 EYT**VLVRSRHFGF*CTVFRPVPEYQYSQRGAFH*VQDL*VWCEHLQIPFLF 6971
Range 5: 7017 to 7265 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
193.1 bits(415) | 0.0 | 82/83(99%) | 0/83(0%) | Plus/Minus |
Query 91 *QAAEKAFYCIMTNFFLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPRTSHGNLNSELCATARSTASLPKHISTPSTSRVKGD 339 *QAAEKAFYCIMTNFFLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPRTSHGNLNSELCATARSTASLPKHISTPSTSRV+GD Subject 7017 *QAAEKAFYCIMTNFFLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPRTSHGNLNSELCATARSTASLPKHISTPSTSRVRGD 7265
Range 6: 6818 to 6970 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
122.5 bits(261) | 0.0 | 49/51(96%) | 0/51(0%) | Plus/Minus |
Query 386 KRKGICKCSHQTYKFWT**NAPLLEY*YSGTGLKTVHQNPKCLERTSTHQV 538 KRKGICKCSHQTYK WT**NAPL EY*YSGTGLKTVHQNPKCLERTSTHQV Subject 6818 KRKGICKCSHQTYKSWT**NAPLWEY*YSGTGLKTVHQNPKCLERTSTHQV 6970
Range 7: 6818 to 7057 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
177.9 bits(382) | 0.0 | 75/80(94%) | 0/80(0%) | Minus/Plus |
Query 299 YLMSTCPFKTFRVLMYCFQTRTRISVFQKRRISLSPKLVGLV*TLANTFPLSVLKLAATGWTTSLWDRPSL*MLKGC*YV 538 YLMSTCPFKTFRVLMYCFQTRTRISVF KRRISLSP+LVGLV*TLANTFPLSV KL ATGWTTSLWD PSL*MLKGC*YV Subject 6818 YLMSTCPFKTFRVLMYCFQTRTRISVFPKRRISLSPRLVGLV*TLANTFPLSVSKLVATGWTTSLWDHPSL*MLKGC*YV 7057
Range 8: 7100 to 7264 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
136.7 bits(292) | 0.0 | 54/55(98%) | 0/55(0%) | Minus/Plus |
Query 92 NSSCRVRFEVQPSMW*PF*NQETQPQRTGTGFTSLPQDIGRNWSLCSKMPFQQPA 256 NSSCRVRFEVQPSMW*PF*NQETQPQRT TGFTSLPQDIGRNWSLCSKMPFQQPA Subject 7100 NSSCRVRFEVQPSMW*PF*NQETQPQRTSTGFTSLPQDIGRNWSLCSKMPFQQPA 7264
Range 9: 7028 to 7264 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
188.0 bits(404) | 0.0 | 78/79(99%) | 0/79(0%) | Plus/Minus |
Query 92 SRLLKRHFTA**PISSYVLWQRCKTSACPLGLGLLISKGLPH*RLNLEPHTAT*IQSCAQQRDLPPPCQNISAPLQHLE 328 SRLLKRHFTA**PISSYVLWQRCKTSACPLGLGLLISKGLPH*RLNLEPHTAT*IQSC QQRDLPPPCQNISAPLQHLE Subject 7028 SRLLKRHFTA**PISSYVLWQRCKTSACPLGLGLLISKGLPH*RLNLEPHTAT*IQSCVQQRDLPPPCQNISAPLQHLE 7264
Range 10: 6813 to 6968 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
121.1 bits(258) | 0.0 | 50/52(96%) | 0/52(0%) | Plus/Minus |
Query 388 EERYLQVFTPNLQVLDLMKCASFGILIFWYGSENSTSKPEMS*TDKYSSSMF 543 EERYLQVFTPNLQVLDLMKCAS GILIFWYGSENSTSKPEMS*TDKYSSS+F Subject 6813 EERYLQVFTPNLQVLDLMKCASLGILIFWYGSENSTSKPEMS*TDKYSSSIF 6968
Grapevine Rupestris stem pitting associated virus, complete genome
Sequence ID: AF026278.1 Length: 8725 Number of Matches: 9
Range 1: 6814 to 7263 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
352.1 bits(762) | 0.0 | 145/150(97%) | 0/150(0%) | Minus/Plus |
Query 93 NILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHRKKLVIMQ*NAFSAAC 542 NILDEYLSVQD SGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLD VIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHR+KL+IMQ*+AFSAAC Subject 6814 NILDEYLSVQDFSGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDKVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAAC 7263
Range 2: 7017 to 7262 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
171.1 bits(367) | 0.0 | 74/82(90%) | 0/82(0%) | Plus/Minus |
Query 94 QAAEKAFYCIMTNFFLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPRTSHGNLNSELCATARSTASLPKHISTPSTSRVKGD 339 QAAEKA YC++ NF LCLVAAM*NQCLSSGVGSLDFKRVTTLKVEP TS GNLNSELCATARSTASLPKHISTPSTS VKGD Subject 7017 QAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSELCATARSTASLPKHISTPSTSSVKGD 7262
Range 3: 6813 to 6968 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
113.3 bits(241) | 0.0 | 46/52(88%) | 0/52(0%) | Plus/Minus |
Query 388 EERYLQVFTPNLQVLDLMKCASFGILIFWYGSENSTSKPEMS*TDKYSSSMF 543 EERYLQVFTPNLQV DLMKCAS G+L+FWYGSENSTSKPE S TDKYSSSMF Subject 6813 EERYLQVFTPNLQVFDLMKCASLGMLMFWYGSENSTSKPEKSWTDKYSSSMF 6968
Range 4: 6814 to 7263 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
241.2 bits(520) | 0.0 | 103/150(69%) | 0/150(0%) | Plus/Minus |
Query 93 AGC*KGILLHNDQFLPMSCGSDVKPVPVLWGWVS*FQKGYHIEG*TSNLTRQLEFRVVRNSEIYRLLAKTYQHPFNI*SEGRSHNDVVQPVAANFKTERGKVFASVHTKPTSFGLNEMRLFWNTDILVRV*KQYIKTRNVLNGQVLIKYV 542 AGC*KGILLH+ QFLP+SC S+VKPVP+LWGW+S*FQK Y ++ *TSN TR EFRVVRN EI+ LLAK Y HPFNI + R HND VQ V AN KTE GK+FAS+H KPTSF L+EM LF N D+LV V +Q+IKT +L+GQVLIKYV Subject 6814 AGC*KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVVRNGEIHCLLAKAY*HPFNIQCKRRPHNDFVQTVTANLKTEGGKIFASIHAKPTSF*LDEMCLFRNADVLVWVREQHIKT*KILDGQVLIKYV 7263
Range 5: 7008 to 7274 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.0 bits(273) | 0.0 | 55/89(62%) | 0/89(0%) | Minus/Plus |
Query 82 HCGIALHSRC*RGADMFWQGGGRSRCCAQL*IQVAV*GSRFNLQCGNPFEIKRPNPRGQALVLHRCHKT*EEIGHYAVKCLFSSLLLSK 348 HCG+A ++ C*RGA+M WQGG SR CAQL*IQ+ +* RFN N FEIKR NPRG ALVLH C+KT EI ++AV+CLFSSL + + Subject 7008 HCGVAFYTGC*RGANMLWQGGSGSRRCAQL*IQITL*S*RFNF*RRNSFEIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFSSLRIGQ 7274
Range 6: 6813 to 6968 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
77.6 bits(163) | 0.0 | 34/52(65%) | 0/52(0%) | Minus/Plus |
Query 388 KHT**VLVRSRHFGF*CTVFRPVPEYQYSKRGAFH*VQNL*VWCEHLQIPFL 543 +HT**VLVR R F F*C V P+P++Q+S RG FH V+NL*VW E+LQI FL Subject 6813 EHT**VLVRPRFFRF*CAVLGPIPKHQHS*RGTFHQVKNL*VWREYLQISFL 6968
Range 7: 6812 to 7264 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
182.5 bits(392) | 0.0 | 102/151(68%) | 0/151(0%) | Minus/Plus |
Query 92 *TYLMSTCPFKTFRVLMYCFQTRTRISVFQKRRISLSPKLVGLV*TLANTFPLSVLKLAATGWTTSLWDRPSL*MLKGC*YVXXXXXXXXXXXXXLNSSCRVRFEVQPSMW*PF*NQETQPQRTGTGFTSLPQDIGRNWSLCSKMPFQQPA 544 *TYLMSTCP K F+VLM C +T T+ S F KR IS S KLVGL * LAN FP SVL+LA T WT SLW R MLKGC*Y LARR+ IS LRTTLNS+ V+ EVQ * F*NQE QPQR GTGFT L QD GRN CSKMPFQQPA Subject 6812 *TYLMSTCPSKIFQVLMCCSRTHTKTSAFLKRHISSSQKLVGLA*ILANIFPPSVLRLAVTVWTKSLWGRLLHWMLKGC*YALARRQWISPLRTTLNSNYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQQPA 7264
Range 8: 7034 to 7261 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
108.3 bits(230) | 0.0 | 53/76(70%) | 0/76(0%) | Plus/Minus |
Query 95 RLLKRHFTA**PISSYVLWQRCKTSACPLGLGLLISKGLPH*RLNLEPHTAT*IQSCAQQRDLPPPCQNISAPLQH 322 RLLKRH TA* IS VL Q+CKTSA PLGL LLISK L *+LNL H *IQSCAQ+RD PPCQ+I APLQH Subject 7034 RLLKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKELRR*KLNL*LHKVI*IQSCAQRRDPLPPCQSILAPLQH 7261
Range 9: 6815 to 6970 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
74.8 bits(157) | 0.0 | 35/52(67%) | 0/52(0%) | Plus/Minus |
Query 386 KRKGICKCSHQTYKFWT**NAPLLEY*YSGTGLKTVHQNPKCLERTSTHQVC 541 +RK ICK S QTYKF T**N PL E * G G +T HQN K L RTSTHQVC Subject 6815 RRKDICKYSRQTYKFLT**NVPL*EC*CFGMGPRTAHQNLKNLGRTSTHQVC 6970
Rupestris stem pitting associated virus 1, complete genome
Sequence ID: AF057136.1 Length: 8744 Number of Matches: 9
Range 1: 6815 to 7264 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
352.1 bits(762) | 0.0 | 145/150(97%) | 0/150(0%) | Minus/Plus |
Query 93 NILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHRKKLVIMQ*NAFSAAC 542 NILDEYLSVQD SGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLD VIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHR+KL+IMQ*+AFSAAC Subject 6815 NILDEYLSVQDFSGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDKVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAAC 7264
Range 2: 7018 to 7263 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
171.1 bits(367) | 0.0 | 74/82(90%) | 0/82(0%) | Plus/Minus |
Query 94 QAAEKAFYCIMTNFFLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPRTSHGNLNSELCATARSTASLPKHISTPSTSRVKGD 339 QAAEKA YC++ NF LCLVAAM*NQCLSSGVGSLDFKRVTTLKVEP TS GNLNSELCATARSTASLPKHISTPSTS VKGD Subject 7018 QAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSELCATARSTASLPKHISTPSTSSVKGD 7263
Range 3: 6817 to 6969 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
108.7 bits(231) | 0.0 | 44/51(86%) | 0/51(0%) | Plus/Minus |
Query 388 EERYLQVFTPNLQVLDLMKCASFGILIFWYGSENSTSKPEMS*TDKYSSSM 540 EERYLQVFTPNLQV DLMKCAS G+L+FWYGSENSTSKPE S TDKYSSS+ Subject 6817 EERYLQVFTPNLQVFDLMKCASLGMLMFWYGSENSTSKPEKSWTDKYSSSI 6969
Range 4: 6815 to 7264 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
243.0 bits(524) | 0.0 | 103/150(69%) | 0/150(0%) | Plus/Minus |
Query 93 AGC*KGILLHNDQFLPMSCGSDVKPVPVLWGWVS*FQKGYHIEG*TSNLTRQLEFRVVRNSEIYRLLAKTYQHPFNI*SEGRSHNDVVQPVAANFKTERGKVFASVHTKPTSFGLNEMRLFWNTDILVRV*KQYIKTRNVLNGQVLIKYV 542 AGC*KGILLH+ QFLP+SC S+VKPVP+LWGW+S*FQK Y ++ *TSN TR EFRVVRNSEI+ LL K Y HPFNI* + R HND VQ V AN KTE GK+FAS+H KPTSF L+EM LF N D+LV V +Q+IKT +L+GQVLIKY+ Subject 6815 AGC*KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVVRNSEIHCLLTKAY*HPFNI*CKRRPHNDFVQTVTANLKTEGGKIFASIHAKPTSF*LDEMCLFRNADVLVWVREQHIKT*KILDGQVLIKYI 7264
Range 5: 7009 to 7275 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.6 bits(283) | 0.0 | 56/89(63%) | 0/89(0%) | Minus/Plus |
Query 82 HCGIALHSRC*RGADMFWQGGGRSRCCAQL*IQVAV*GSRFNLQCGNPFEIKRPNPRGQALVLHRCHKT*EEIGHYAVKCLFSSLLLSK 348 HCG+A ++RC*RGA+M W GG SRCCAQL*IQ+ +* RFN N FEIKR NPRG ALVLH C+KT EI ++AV+CLFSSL + + Subject 7009 HCGVAFYTRC*RGANMLW*GGSGSRCCAQL*IQITL*S*RFNF*RRNSFEIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFSSLRIGQ 7275
Range 6: 6817 to 6969 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
74.4 bits(156) | 0.0 | 33/51(65%) | 0/51(0%) | Minus/Plus |
Query 388 HT**VLVRSRHFGF*CTVFRPVPEYQYSKRGAFH*VQNL*VWCEHLQIPFL 540 +T**VLVR R F F*C V P+P++Q+S RG FH V+NL*VW E+LQI FL Subject 6817 YT**VLVRPRFFRF*CAVLGPIPKHQHS*RGTFHQVKNL*VWREYLQISFL 6969
Range 7: 6819 to 7265 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
182.1 bits(391) | 0.0 | 101/149(68%) | 0/149(0%) | Minus/Plus |
Query 92 YLMSTCPFKTFRVLMYCFQTRTRISVFQKRRISLSPKLVGLV*TLANTFPLSVLKLAATGWTTSLWDRPSL*MLKGC*YVXXXXXXXXXXXXXLNSSCRVRFEVQPSMW*PF*NQETQPQRTGTGFTSLPQDIGRNWSLCSKMPFQQPA 538 YLMSTCP K F+VLM C +T T+ S F KR IS S KLVGL * LAN FP SVL+LA T WT SLW R *MLKGC*Y L RR+ ISLLRTTLNS+ V+ EVQ * F*NQE QPQR GTGFT L QD GRN CSKMPFQQPA Subject 6819 YLMSTCPSKIFQVLMCCSRTHTKTSAFLKRHISSSQKLVGLA*ILANIFPPSVLRLAVTVWTKSLWGRLLH*MLKGC*YALVRRQWISLLRTTLNSNYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQQPA 7265
Range 8: 7032 to 7262 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.9 bits(227) | 0.0 | 54/77(70%) | 0/77(0%) | Plus/Minus |
Query 95 RLLKRHFTA**PISSYVLWQRCKTSACPLGLGLLISKGLPH*RLNLEPHTAT*IQSCAQQRDLPPPCQNISAPLQHL 325 RLLKRH TA* IS VL Q+CKTSA PLGL LLISK L *+LNL H *IQSCAQQRD PP Q+I APLQHL Subject 7032 RLLKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKELRR*KLNL*LHKVI*IQSCAQQRDPLPPYQSILAPLQHL 7262
Range 9: 6819 to 6971 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
70.7 bits(148) | 0.0 | 34/51(67%) | 0/51(0%) | Plus/Minus |
Query 386 KRKGICKCSHQTYKFWT**NAPLLEY*YSGTGLKTVHQNPKCLERTSTHQV 538 +RK ICK S QTYKF T**N PL E * G G +T HQN K L RTSTHQV Subject 6819 RRKDICKYSRQTYKFLT**NVPL*EC*CFGMGPRTAHQNLKNLGRTSTHQV 6971
Rupestris stem pitting associated virus 1, complete genome
Sequence ID: NC_001948.1 Length: 8744 Number of Matches: 9
Range 1: 6815 to 7264 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
352.1 bits(762) | 0.0 | 145/150(97%) | 0/150(0%) | Minus/Plus |
Query 93 NILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHRKKLVIMQ*NAFSAAC 542 NILDEYLSVQD SGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLD VIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHR+KL+IMQ*+AFSAAC Subject 6815 NILDEYLSVQDFSGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDKVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAAC 7264
Range 2: 7018 to 7263 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
171.1 bits(367) | 0.0 | 74/82(90%) | 0/82(0%) | Plus/Minus |
Query 94 QAAEKAFYCIMTNFFLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPRTSHGNLNSELCATARSTASLPKHISTPSTSRVKGD 339 QAAEKA YC++ NF LCLVAAM*NQCLSSGVGSLDFKRVTTLKVEP TS GNLNSELCATARSTASLPKHISTPSTS VKGD Subject 7018 QAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSELCATARSTASLPKHISTPSTSSVKGD 7263
Range 3: 6817 to 6969 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
108.7 bits(231) | 0.0 | 44/51(86%) | 0/51(0%) | Plus/Minus |
Query 388 EERYLQVFTPNLQVLDLMKCASFGILIFWYGSENSTSKPEMS*TDKYSSSM 540 EERYLQVFTPNLQV DLMKCAS G+L+FWYGSENSTSKPE S TDKYSSS+ Subject 6817 EERYLQVFTPNLQVFDLMKCASLGMLMFWYGSENSTSKPEKSWTDKYSSSI 6969
Range 4: 6815 to 7264 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
243.0 bits(524) | 0.0 | 103/150(69%) | 0/150(0%) | Plus/Minus |
Query 93 AGC*KGILLHNDQFLPMSCGSDVKPVPVLWGWVS*FQKGYHIEG*TSNLTRQLEFRVVRNSEIYRLLAKTYQHPFNI*SEGRSHNDVVQPVAANFKTERGKVFASVHTKPTSFGLNEMRLFWNTDILVRV*KQYIKTRNVLNGQVLIKYV 542 AGC*KGILLH+ QFLP+SC S+VKPVP+LWGW+S*FQK Y ++ *TSN TR EFRVVRNSEI+ LL K Y HPFNI* + R HND VQ V AN KTE GK+FAS+H KPTSF L+EM LF N D+LV V +Q+IKT +L+GQVLIKY+ Subject 6815 AGC*KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVVRNSEIHCLLTKAY*HPFNI*CKRRPHNDFVQTVTANLKTEGGKIFASIHAKPTSF*LDEMCLFRNADVLVWVREQHIKT*KILDGQVLIKYI 7264
Range 5: 7009 to 7275 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.6 bits(283) | 0.0 | 56/89(63%) | 0/89(0%) | Minus/Plus |
Query 82 HCGIALHSRC*RGADMFWQGGGRSRCCAQL*IQVAV*GSRFNLQCGNPFEIKRPNPRGQALVLHRCHKT*EEIGHYAVKCLFSSLLLSK 348 HCG+A ++RC*RGA+M W GG SRCCAQL*IQ+ +* RFN N FEIKR NPRG ALVLH C+KT EI ++AV+CLFSSL + + Subject 7009 HCGVAFYTRC*RGANMLW*GGSGSRCCAQL*IQITL*S*RFNF*RRNSFEIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFSSLRIGQ 7275
Range 6: 6817 to 6969 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
74.4 bits(156) | 0.0 | 33/51(65%) | 0/51(0%) | Minus/Plus |
Query 388 HT**VLVRSRHFGF*CTVFRPVPEYQYSKRGAFH*VQNL*VWCEHLQIPFL 540 +T**VLVR R F F*C V P+P++Q+S RG FH V+NL*VW E+LQI FL Subject 6817 YT**VLVRPRFFRF*CAVLGPIPKHQHS*RGTFHQVKNL*VWREYLQISFL 6969
Range 7: 6819 to 7265 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
182.1 bits(391) | 0.0 | 101/149(68%) | 0/149(0%) | Minus/Plus |
Query 92 YLMSTCPFKTFRVLMYCFQTRTRISVFQKRRISLSPKLVGLV*TLANTFPLSVLKLAATGWTTSLWDRPSL*MLKGC*YVXXXXXXXXXXXXXLNSSCRVRFEVQPSMW*PF*NQETQPQRTGTGFTSLPQDIGRNWSLCSKMPFQQPA 538 YLMSTCP K F+VLM C +T T+ S F KR IS S KLVGL * LAN FP SVL+LA T WT SLW R *MLKGC*Y L RR+ ISLLRTTLNS+ V+ EVQ * F*NQE QPQR GTGFT L QD GRN CSKMPFQQPA Subject 6819 YLMSTCPSKIFQVLMCCSRTHTKTSAFLKRHISSSQKLVGLA*ILANIFPPSVLRLAVTVWTKSLWGRLLH*MLKGC*YALVRRQWISLLRTTLNSNYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQQPA 7265
Range 8: 7032 to 7262 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.9 bits(227) | 0.0 | 54/77(70%) | 0/77(0%) | Plus/Minus |
Query 95 RLLKRHFTA**PISSYVLWQRCKTSACPLGLGLLISKGLPH*RLNLEPHTAT*IQSCAQQRDLPPPCQNISAPLQHL 325 RLLKRH TA* IS VL Q+CKTSA PLGL LLISK L *+LNL H *IQSCAQQRD PP Q+I APLQHL Subject 7032 RLLKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKELRR*KLNL*LHKVI*IQSCAQQRDPLPPYQSILAPLQHL 7262
Range 9: 6819 to 6971 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
70.7 bits(148) | 0.0 | 34/51(67%) | 0/51(0%) | Plus/Minus |
Query 386 KRKGICKCSHQTYKFWT**NAPLLEY*YSGTGLKTVHQNPKCLERTSTHQV 538 +RK ICK S QTYKF T**N PL E * G G +T HQN K L RTSTHQV Subject 6819 RRKDICKYSRQTYKFLT**NVPL*EC*CFGMGPRTAHQNLKNLGRTSTHQV 6971
Nucleotide Sequence (350 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
254.9 | 793.6 | 31% | 2.919e-66 | 42% | KX925556.1 | |
254.0 | 1306.3 | 31% | 5.51e-66 | 81% | KT948710.1 | |
259.0 | 1156.5 | 31% | 1.674e-67 | 68% | KR054734.1 | |
259.0 | 1305.9 | 31% | 1.674e-67 | 79% | KX958435.1 | |
254.0 | 1441.5 | 31% | 5.51e-66 | 92% | KX274274.1 |
Alignments
Grapevine rupestris stem pitting associated virus isolate TEMP BR replicase, 24.4 kDa protein, 12.8 kDa protein, 8.4 kDa protein, and 28 kDa protein genes, complete cds
Sequence ID: KX925556.1 Length: 8700 Number of Matches: 6
Range 1: 5210 to 5530 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
254.9 bits(550) | 0.0 | 104/107(97%) | 0/107(0%) | Plus/Plus |
Query 1 ESTRARWVGKMALKEHREVRCGHETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH 321 ESTRARWVGKMALKEHREVRCGHE TQQFFDEHRGG GEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLD+FLSKVPLNASH Subject 5210 ESTRARWVGKMALKEHREVRCGHEVTQQFFDEHRGGAGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKVPLNASH 5530
Range 2: 5212 to 5526 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.0 bits(417) | 0.0 | 82/105(78%) | 0/105(0%) | Minus/Minus |
Query 3 LAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPMPPLCSSKNC*VVSCPHRTSRCSFKAIFPTHLALVD 317 LAF+GT DRK SS+NFP GFARL+ AAST GFEN +RFRTA++KVMES PLCLG*MLS S ALL+CSP PPLCSSKNC V S P RTSRCSFKAI PTHLALVD Subject 5212 LAFSGTLDRKESSKNFPYGFARLNLAASTWGFENLRRFRTAMRKVMESFPLCLG*MLSNLSHALLSCSPAPPLCSSKNCCVTSWPQRTSRCSFKAILPTHLALVD 5526
Range 3: 5210 to 5536 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.4 bits(215) | 0.0 | 50/109(46%) | 0/109(0%) | Minus/Minus |
Query 1 G*VASIQWDF**ESVEQEFSVRLCTPQLRSFHLWL*KL*AFSDGH*KSDGVITLMSRINALKTFTSIAQLLTHAPPVFIKELLSCLMPTSYLTMLFQSHFPNPSSPG*L 327 G V I W+ E ++ E + C PQ F+L L*K FS+ H + G+I+ M +NA K+FT IAQLLT V IKELL LM T++L MLF HF +P G*L Subject 5210 GIVTGI*WNLRQEGIQ*ELPIWFCPPQFGRFNLGL*KFETFSNSHEEGYGIISFMPWVNAFKSFTCIAQLLTSTTSVLIKELLRYLMATAHLPMLF*GHFAHPPGSG*L 5536
Range 4: 5211 to 5468 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
91.3 bits(193) | 0.0 | 42/86(49%) | 0/86(0%) | Minus/Minus |
Query 2 LHASASQLPPVALKTLSVFGRPLKK*WSHYPYV*DKCSQNVHKHCSIAHPCPPCVHQRIAELSHAHIVPHDALSKPFSQPI*PWLT 259 L AS L P ALK VF +P + W+H+ Y KC Q H HCS AH C HQRIA L H H P DAL +PF P WLT Subject 5211 LPASIWPLQPGALKI*DVFEQP*GRLWNHFLYALGKCFQIFHMHCSAAHQHHLCAHQRIAALPHGHSAPPDALLRPFCPPTWLWLT 5468
Range 5: 5212 to 5523 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.5 bits(165) | 0.0 | 44/104(42%) | 0/104(0%) | Plus/Plus |
Query 3 VNQG*MGWENGFERAS*GTMWA*DNSAIL**TQGGHG*AIEQCL*TF*EHLS*T*G**LHHFFNGRPKTLKVFKATGGSCEAEACKALRKIPARHFPIKSPIEC 314 VNQ +G +NG +RAS G +W * N+AIL** Q *A EQC+* *+HL * * H+ +G KT ++FKA G S + EA K + ++ P+ +C Subject 5212 VNQSQVGGQNGLKRASGGALWP*GNAAIL**AQRWCW*AAEQCM*KI*KHLPKA*RK*FHNLPHGCSKTSQIFKAPG*SGQIEAGKTIWEVLTGFLPV*GSTKC 5523
Range 6: 5211 to 5537 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
73.5 bits(154) | 0.0 | 50/109(46%) | 0/109(0%) | Plus/Plus |
Query 2 SQPGLDGLGKWL*KSIVRYDVGMRQLSNSLMNTGGAWVSN*AMLVNVLRAFILDIRVMTPSLF*WPSENA*SFQSHRWKLRS*GVQSLTENSCSTLSYQKSH*MLATYP 328 SQP G KW *KSI R V MR SNSLM+T VS+*AM V L+AF I+ M P W EN +FQS R K +*G Q+ +S S + H*M T P Subject 5211 SQPEPGGWAKWP*KSIGRCAVAMR*RSNSLMSTEVVLVSS*AMHVKDLKAFTQGIKEMIP*PSSWLFENVSNFQSPRLKRPN*GGQNHMGSSYWIPSCLRFH*MPVTIP 5537
Grapevine rupestris stem pitting associated virus isolate VF1, partial genome
Sequence ID: KT948710.1 Length: 8716 Number of Matches: 6
Range 1: 5222 to 5542 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
254.0 bits(548) | 0.0 | 104/107(97%) | 0/107(0%) | Plus/Plus |
Query 1 ESTRARWVGKMALKEHREVRCGHETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH 321 ESTRARWVGKMALKE+REVRCG+ETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPL+ASH Subject 5222 ESTRARWVGKMALKEYREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLSASH 5542
Range 2: 5224 to 5541 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
240.3 bits(518) | 0.0 | 101/106(95%) | 0/106(0%) | Minus/Minus |
Query 3 WLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPMPPLCSSKNC*VVSCPHRTSRCSFKAIFPTHLALVD 320 WLA NGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKV+ESLPLCLG*MLSKRSQALLNCSP+PPLCSSKNC*VVS PHRTSR SFKAIFPTHLALVD Subject 5224 WLALNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVIESLPLCLG*MLSKRSQALLNCSPIPPLCSSKNC*VVSYPHRTSRYSFKAIFPTHLALVD 5541
Range 3: 5223 to 5540 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
209.1 bits(450) | 0.0 | 86/106(81%) | 0/106(0%) | Minus/Minus |
Query 2 G*HSMGLLIGKCRAGIFRKALHASASQLPPVALKTLSVFGRPLKK*WSHYPYV*DKCSQNVHKHCSIAHPCPPCVHQRIAELSHAHIVPHDALSKPFSQPI*PWLT 319 G*H MGLLIG+C+AGI KALHA ASQLPPVAL+T SV GRP K+* SH PYV*DKCSQNVHKHCSIA P PPCVH+RIAELSH HIVPH LS+PFSQPI*PWLT Subject 5223 G*HLMGLLIGRCQAGISHKALHALASQLPPVALRTSSVSGRPSKR**SHCPYV*DKCSQNVHKHCSIARPSPPCVHRRIAELSHTHIVPHGTLSRPFSQPI*PWLT 5540
Range 4: 5223 to 5549 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
206.8 bits(445) | 0.0 | 93/109(85%) | 0/109(0%) | Plus/Plus |
Query 2 SQPGLDGLGKWL*KSIVRYDVGMRQLSNSLMNTGGAWVSN*AMLVNVLRAFILDIRVMTPSLF*WPSENA*SFQSHRWKLRS*GVQSLTENSCSTLSYQKSH*MLATYP 328 SQPGLDGLGKW *KS VRYDVGMRQLSNS MNTGG W SN*AMLVNVLRAFILDIR MT S F*WPS NA*S QSHRWKLRS*GVQSL NSC T SYQKSH*+LAT P Subject 5223 SQPGLDGLGKWP*KSTVRYDVGMRQLSNSSMNTGGGWASN*AMLVNVLRAFILDIRAMTLSPF*WPSGNA*SSQSHRWKLRS*GVQSLMGNSCLTPSYQKSH*VLATIP 5549
Range 5: 5222 to 5548 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
202.2 bits(435) | 0.0 | 88/109(81%) | 0/109(0%) | Minus/Minus |
Query 1 G*VASIQWDF**ESVEQEFSVRLCTPQLRSFHLWL*KL*AFSDGH*KSDGVITLMSRINALKTFTSIAQLLTHAPPVFIKELLSCLMPTSYLTMLFQSHFPNPSSPG*L 327 G VAS WDF**E V+QEF +RLCTP LRSFHLWL*+L AF DGH K D VI LMSRINALKTFTSIAQLL H PPVFI+ELLSCL+PTSYLT+LFQ HFPNPSSPG*L Subject 5222 GIVAST*WDF**EGVKQEFPIRLCTP*LRSFHLWL*ELQAFPDGHQKGDRVIALMSRINALKTFTSIAQLLAHPPPVFIEELLSCLIPTSYLTVLFQGHFPNPSSPG*L 5548
Range 6: 5224 to 5541 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.0 bits(417) | 0.0 | 86/106(81%) | 0/106(0%) | Plus/Plus |
Query 3 VNQG*MGWENGFERAS*GTMWA*DNSAIL**TQGGHG*AIEQCL*TF*EHLS*T*G**LHHFFNGRPKTLKVFKATGGSCEAEACKALRKIPARHFPIKSPIEC*P 320 VNQG*MGWENG ER *GTMW *DNSAIL *TQGG G AIEQCL*TF*EHLS*T*G *L+H F+GRP+TL+V KATGGSCEA+ACKAL +IPA H PIKSPI+C*P Subject 5224 VNQG*MGWENGLERVP*GTMWV*DNSAILR*TQGGDGRAIEQCL*TF*EHLS*T*GQ*LYHLFDGRPETLEVLKATGGSCEAKACKALWEIPA*HLPIKSPIKC*P 5541
Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome
Sequence ID: KR054734.1 Length: 8753 Number of Matches: 6
Range 1: 5221 to 5541 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
259.0 bits(559) | 0.0 | 106/107(99%) | 0/107(0%) | Plus/Plus |
Query 1 ESTRARWVGKMALKEHREVRCGHETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH 321 ESTRARWVGKMALKEHREVRCG+ETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH Subject 5221 ESTRARWVGKMALKEHREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH 5541
Range 2: 5223 to 5540 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
237.0 bits(511) | 0.0 | 99/106(93%) | 0/106(0%) | Minus/Minus |
Query 3 WLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPMPPLCSSKNC*VVSCPHRTSRCSFKAIFPTHLALVD 320 WLAFNGTFD+ VSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLS SQALLNCSP+PPLCSSKNC*VVS P RTSRCSFKAIFPTHLALVD Subject 5223 WLAFNGTFDKNVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSNLSQALLNCSPIPPLCSSKNC*VVSYPQRTSRCSFKAIFPTHLALVD 5540
Range 3: 5221 to 5541 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
179.3 bits(385) | 0.0 | 76/107(71%) | 0/107(0%) | Minus/Minus |
Query 1 VASIQWDF**ESVEQEFSVRLCTPQLRSFHLWL*KL*AFSDGH*KSDGVITLMSRINALKTFTSIAQLLTHAPPVFIKELLSCLMPTSYLTMLFQSHFPNPSSPG*L 321 VASIQW+F* + V+Q+FS+RLC P L S HLWL*KL* D H*KSDG+ITLMSR+NA K+FTSIA LL H P VFI+ELLSCL+P ++LT+LFQ HFP+PSSPG*L Subject 5221 VASIQWNF*QKCVKQKFSIRLCAP*LCSLHLWL*KL*TLPDSH*KSDGIITLMSRVNAFKSFTSIA*LLAHTPSVFIEELLSCLIPATHLTVLFQGHFPDPSSPG*L 5541
Range 4: 5222 to 5539 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
168.3 bits(361) | 0.0 | 72/106(68%) | 0/106(0%) | Minus/Minus |
Query 2 G*HSMGLLIGKCRAGIFRKALHASASQLPPVALKTLSVFGRPLKK*WSHYPYV*DKCSQNVHKHCSIAHPCPPCVHQRIAELSHAHIVPHDALSKPFSQPI*PWLT 319 G*HSM LL C+A IF KAL A A Q P VALKTL+ G+PLKK*W+HYPYV* KC Q HKHC IA P P CVH+R AELSH PH ALS+PFS+PI*PWLT Subject 5222 G*HSMELLTKMCQAEIFHKALRALALQPPLVALKTLNASGQPLKK*WNHYPYV*GKCFQIFHKHCLIARPYPLCVHRRTAELSHTRNAPHGALSRPFSRPI*PWLT 5539
Range 5: 5222 to 5542 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
163.7 bits(351) | 0.0 | 76/107(71%) | 0/107(0%) | Plus/Plus |
Query 2 SQPGLDGLGKWL*KSIVRYDVGMRQLSNSLMNTGGAWVSN*AMLVNVLRAFILDIRVMTPSLF*WPSENA*SFQSHRWKLRS*GVQSLTENSCSTLSYQKSH*MLAT 322 SQPGLDG GKW *KS VR GMRQLS+S MNT G W SN*AMLV L+AF LDIRVM PSLF*W S + *SFQSH+W+L+S*G QSL EN C T QK H*MLAT Subject 5222 SQPGLDGSGKWP*KSTVRCVAGMRQLSSSSMNTEGVWASN*AMLVKDLKAFTLDIRVMIPSLF*WLSGSV*SFQSHKWRLQS*GAQSLMENFCLTHFCQKFH*MLAT 5542
Range 6: 5223 to 5540 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
149.1 bits(319) | 0.0 | 72/106(68%) | 0/106(0%) | Plus/Plus |
Query 3 VNQG*MGWENGFERAS*GTMWA*DNSAIL**TQGGHG*AIEQCL*TF*EHLS*T*G**LHHFFNGRPKTLKVFKATGGSCEAEACKALRKIPARHFPIKSPIEC*P 320 VNQG*MG ENG ERA *G + *DNSA+L *TQ G+G AI+QCL* *+HL *T*G** HHFFNG P+ KVFKAT G C+A+A KAL KI A H +KS IEC*P Subject 5223 VNQG*MGRENGLERAP*GALRV*DNSAVLR*TQRGYGRAIKQCL*KI*KHLP*T*G**FHHFFNGCPEAFKVFKATSGGCKAKARKALWKISA*HIFVKSSIEC*P 5540
Grapevine rupestris stem pitting associated virus isolate CS BR, complete genome
Sequence ID: KX958435.1 Length: 8743 Number of Matches: 6
Range 1: 5222 to 5542 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
259.0 bits(559) | 0.0 | 106/107(99%) | 0/107(0%) | Plus/Plus |
Query 1 ESTRARWVGKMALKEHREVRCGHETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH 321 ESTRARWVGKMALKEHREVRCG+ETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH Subject 5222 ESTRARWVGKMALKEHREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH 5542
Range 2: 5224 to 5541 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
248.5 bits(536) | 0.0 | 103/106(97%) | 0/106(0%) | Minus/Minus |
Query 3 WLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPMPPLCSSKNC*VVSCPHRTSRCSFKAIFPTHLALVD 320 WLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENF+RFRTAIKKVMESLPLCLG*MLSKRSQALLNCSP+PPLCSSKNC*VVS PHRTSRCSFKAIFPTHLALVD Subject 5224 WLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFRRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPIPPLCSSKNC*VVSYPHRTSRCSFKAIFPTHLALVD 5541
Range 3: 5223 to 5543 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
205.9 bits(443) | 0.0 | 90/107(84%) | 0/107(0%) | Plus/Plus |
Query 2 SQPGLDGLGKWL*KSIVRYDVGMRQLSNSLMNTGGAWVSN*AMLVNVLRAFILDIRVMTPSLF*WPSENA*SFQSHRWKLRS*GVQSLTENSCSTLSYQKSH*MLAT 322 SQPGLDGLGKW *+S VRYDVGM+QLSNS MNTGG W SN*AM VNVL+AFILD R MTP F*WPSENA*SFQSHRWKLRS*GVQSL NSC TLSY+KSH*MLAT Subject 5223 SQPGLDGLGKWP*RSTVRYDVGMKQLSNSSMNTGGEWASN*AMPVNVLKAFILDTRAMTPLPF*WPSENA*SFQSHRWKLRS*GVQSLMGNSCLTLSYRKSH*MLAT 5543
Range 4: 5223 to 5540 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
205.0 bits(441) | 0.0 | 84/106(79%) | 0/106(0%) | Minus/Minus |
Query 2 G*HSMGLLIGKCRAGIFRKALHASASQLPPVALKTLSVFGRPLKK*WSHYPYV*DKCSQNVHKHCSIAHPCPPCVHQRIAELSHAHIVPHDALSKPFSQPI*PWLT 319 G*H MGL IGKC+AGI KALHA ASQLPPVALKT VFGRPLK+*WSH P V*DKC QNVH+HC IA P PPCVH+RIAEL H HIVPH A S+PFSQPI*PWLT Subject 5223 G*HLMGLSIGKCQAGISHKALHALASQLPPVALKTSGVFGRPLKR*WSHCPCV*DKCFQNVHRHCLIARPFPPCVHRRIAELFHTHIVPHGAPSRPFSQPI*PWLT 5540
Range 5: 5222 to 5542 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
197.6 bits(425) | 0.0 | 85/107(79%) | 0/107(0%) | Minus/Minus |
Query 1 VASIQWDF**ESVEQEFSVRLCTPQLRSFHLWL*KL*AFSDGH*KSDGVITLMSRINALKTFTSIAQLLTHAPPVFIKELLSCLMPTSYLTMLFQSHFPNPSSPG*L 321 VASI WDF *ESV+QEF +RLCTP LRSFHLWL*KL AFSDGH*K +GVI L+SRINA KTFT IA LL H+PPVFI+ELLSC +PTSYLT+L Q HFPNPSSPG*L Subject 5222 VASI*WDFR*ESVKQEFPIRLCTP*LRSFHLWL*KLQAFSDGH*KGNGVIALVSRINAFKTFTGIA*LLAHSPPVFIEELLSCFIPTSYLTVLLQGHFPNPSSPG*L 5542
Range 6: 5224 to 5541 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
189.8 bits(408) | 0.0 | 84/106(79%) | 0/106(0%) | Plus/Plus |
Query 3 VNQG*MGWENGFERAS*GTMWA*DNSAIL**TQGGHG*AIEQCL*TF*EHLS*T*G**LHHFFNGRPKTLKVFKATGGSCEAEACKALRKIPARHFPIKSPIEC*P 320 VNQG*MGWENG E A *GTMW *+NSAIL *TQGG+G AI+QCL*TF*+HLS*T G *LH+ FNGRPKT +VFKATGGSCEA+ACKAL +IPA HFPI+SPI+C*P Subject 5224 VNQG*MGWENGLEGAP*GTMWV*NNSAILR*TQGGNGRAIKQCL*TF*KHLS*TQGQ*LHYLFNGRPKTPEVFKATGGSCEAKACKALWEIPA*HFPIESPIKC*P 5541
Grapevine rupestris stem pitting associated virus isolate SK704 A, complete genome
Sequence ID: KX274274.1 Length: 8725 Number of Matches: 6
Range 1: 5221 to 5541 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
254.0 bits(548) | 0.0 | 104/107(97%) | 0/107(0%) | Plus/Plus |
Query 1 ESTRARWVGKMALKEHREVRCGHETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH 321 ESTRARWVGKMALKE+REVRCG+E TQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH Subject 5221 ESTRARWVGKMALKEYREVRCGYEATQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASH 5541
Range 2: 5222 to 5539 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
248.5 bits(536) | 0.0 | 98/106(92%) | 0/106(0%) | Minus/Minus |
Query 2 G*HSMGLLIGKCRAGIFRKALHASASQLPPVALKTLSVFGRPLKK*WSHYPYV*DKCSQNVHKHCSIAHPCPPCVHQRIAELSHAHIVPHDALSKPFSQPI*PWLT 319 G*HSMGLLIGKCRAGIFRKALHA ASQLPPVALKT SVFGRPLK+*WSHYPYV*DKCSQN HKHCSIAHPCPPCVH+RIAEL H HIVPHD LSKPFSQPI*PWLT Subject 5222 G*HSMGLLIGKCRAGIFRKALHALASQLPPVALKTSSVFGRPLKR*WSHYPYV*DKCSQNAHKHCSIAHPCPPCVHRRIAELPHTHIVPHDTLSKPFSQPI*PWLT 5539
Range 3: 5223 to 5540 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
244.8 bits(528) | 0.0 | 103/106(97%) | 0/106(0%) | Minus/Minus |
Query 3 WLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPMPPLCSSKNC*VVSCPHRTSRCSFKAIFPTHLALVD 320 WLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPMPPLCSSKNC*V S PHRTSR SFKAIFPTHLALVD Subject 5223 WLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPMPPLCSSKNC*VASYPHRTSRYSFKAIFPTHLALVD 5540
Range 4: 5222 to 5542 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
238.0 bits(513) | 0.0 | 104/107(97%) | 0/107(0%) | Plus/Plus |
Query 2 SQPGLDGLGKWL*KSIVRYDVGMRQLSNSLMNTGGAWVSN*AMLVNVLRAFILDIRVMTPSLF*WPSENA*SFQSHRWKLRS*GVQSLTENSCSTLSYQKSH*MLAT 322 SQPGLDGLGKWL*KSIVRYDVGMRQLSNS MNTGGAWVSN*AMLV+VLRAFILDIRVMTPS F*WPSENA*SFQSHRWKLRS*GVQSLTENSCSTLSYQKSH*MLAT Subject 5222 SQPGLDGLGKWL*KSIVRYDVGMRQLSNSSMNTGGAWVSN*AMLVSVLRAFILDIRVMTPSPF*WPSENA*SFQSHRWKLRS*GVQSLTENSCSTLSYQKSH*MLAT 5542
Range 5: 5221 to 5541 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
230.2 bits(496) | 0.0 | 100/107(93%) | 0/107(0%) | Minus/Minus |
Query 1 VASIQWDF**ESVEQEFSVRLCTPQLRSFHLWL*KL*AFSDGH*KSDGVITLMSRINALKTFTSIAQLLTHAPPVFIKELLSCLMPTSYLTMLFQSHFPNPSSPG*L 321 VASIQWDF**ESVEQEFSVRLCTP LRSFHLWL*KL AFSDGH*K DGVITLMSRINALKT TSIAQLLTHAPPVFI+ELLSCL+PTSYLT+LFQSHFPNPSSPG*L Subject 5221 VASIQWDF**ESVEQEFSVRLCTP*LRSFHLWL*KLQAFSDGH*KGDGVITLMSRINALKTLTSIAQLLTHAPPVFIEELLSCLIPTSYLTILFQSHFPNPSSPG*L 5541
Range 6: 5223 to 5540 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
226.0 bits(487) | 0.0 | 98/106(92%) | 0/106(0%) | Plus/Plus |
Query 3 VNQG*MGWENGFERAS*GTMWA*DNSAIL**TQGGHG*AIEQCL*TF*EHLS*T*G**LHHFFNGRPKTLKVFKATGGSCEAEACKALRKIPARHFPIKSPIEC*P 320 VNQG*MGWENGFER S*GTMW * NSAIL *TQGGHG*AIEQCL* F*EHLS*T*G**LHH FNGRPKTL+VFKATGGSCEA+ACKALRKIPARHFPIKSPIEC*P Subject 5223 VNQG*MGWENGFERVS*GTMWV*GNSAILR*TQGGHG*AIEQCL*AF*EHLS*T*G**LHHLFNGRPKTLEVFKATGGSCEAKACKALRKIPARHFPIKSPIEC*P 5540
Nucleotide Sequence (483 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
360.3 | 1988.8 | 36% | 9.296e-98 | 96% | KX274275.1 | |
353.9 | 1778.9 | 36% | 7.932e-96 | 81% | AY368590.1 | |
338.8 | 1072.8 | 30% | 2.853e-91 | 44% | JX559646.1 | |
338.3 | 1061.4 | 30% | 3.92e-91 | 42% | AY881626.1 | |
337.9 | 1073.7 | 30% | 5.385e-91 | 43% | KC427107.1 |
Alignments
Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome
Sequence ID: KX274275.1 Length: 8724 Number of Matches: 7
Range 1: 757 to 1203 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
360.3 bits(780) | 0.0 | 149/149(100%) | 0/149(0%) | Plus/Plus |
Query 2 MLFAPDGNWCEMYSQPLSSRYLLKARSVVLSDGSRYAVDVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL 448 MLFAPDGNWCEMYSQPLSSRYLLKARSVVLSDGSRYAVDVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL Subject 757 MLFAPDGNWCEMYSQPLSSRYLLKARSVVLSDGSRYAVDVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL 1203
Range 2: 756 to 1202 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
338.8 bits(733) | 0.0 | 148/149(99%) | 0/149(0%) | Minus/Minus |
Query 1 SREPLLPQLMTSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCIPRLRGSRSLMPMASKPEKHRMLETRRLLIGVKLNK*WQNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKSI 447 SREPLLPQLMTSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCIPRLRGSRSLMPMASKPEKHRMLET+RLLIGVKLNK*WQNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKSI Subject 756 SREPLLPQLMTSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCIPRLRGSRSLMPMASKPEKHRMLETKRLLIGVKLNK*WQNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKSI 1202
Range 3: 756 to 1202 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
331.9 bits(718) | 0.0 | 143/149(96%) | 0/149(0%) | Plus/Plus |
Query 1 NALCSGW*LV*NVFTTIVK*VFA*S*ISGLI*WFTLCGRCPPFKILPSLIELHPNQ*SSSF*HSVFLWF*RHRH*GSGASKSRYA*LLSGAS*CCY*NISLFENPQKT**GICRGEIASAYRQAYWKGD*IH*GFCFTCHKLWKKWLSA 447 NALCSGW*LV*NVFTTIVK*VFA*S*I GLI*WFTLCGRCPPFKILPSLIELHPNQ*S SF*HSVFLWF*RHRH*GSGASKSRYA*LLSGAS*CCY*NISLFENPQK ** ICRGEIASAYRQ WKGD*IH*GFCFTCHKLWKKWLSA Subject 756 NALCSGW*LV*NVFTTIVK*VFA*S*ICGLI*WFTLCGRCPPFKILPSLIELHPNQ*SFSF*HSVFLWF*RHRH*GSGASKSRYA*LLSGAS*CCY*NISLFENPQKA**RICRGEIASAYRQTNWKGD*IH*GFCFTCHKLWKKWLSA 1202
Range 4: 758 to 1201 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
330.5 bits(715) | 0.0 | 142/148(96%) | 0/148(0%) | Minus/Minus |
Query 3 AESHFFHNL*QVKQNPQ*I*SPFQ*ACR*ADAISPRQIPYQVF*GFSNKDIF**QHHDAPESSYAYRDLEAPDP*CRWRQNQRNTEC*KLEDY*LG*SSISDGRILNGGHRPHSVNHQIRPLI*L*ANTYLTMVVNTFHTSYHPEQRA 446 AESHFFHNL*QVKQNPQ*I*SPFQ CR*ADAISPRQI YQ F*GFSNKDIF**QHHDAPESSYAYRDLEAPDP*CRWRQNQRNTEC*KL+DY*LG*SSISDGRILNGGHRPHSVNHQIRP I*L*ANTYLTMVVNTFHTSYHPEQRA Subject 758 AESHFFHNL*QVKQNPQ*I*SPFQLVCR*ADAISPRQILYQAF*GFSNKDIF**QHHDAPESSYAYRDLEAPDP*CRWRQNQRNTEC*KLKDY*LG*SSISDGRILNGGHRPHSVNHQIRPQI*L*ANTYLTMVVNTFHTSYHPEQRA 1201
Range 5: 758 to 1201 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
327.3 bits(708) | 0.0 | 143/148(97%) | 0/148(0%) | Plus/Plus |
Query 3 CSLLRMVTGVKCIHNHCQVGICLKLDQWSYLMVHAMRSMSSIQNSAITY*ASPQSIIF*FLTFGVSLVLTPSALRIWSL*VAVCIAAFRCIMMLLLKYIFI*EPSKNLIRNLPRRNCVSLSTSLLEGRLNSLRILLHLS*VVEEVALC 446 CSLLRMVTGVKCIHNHCQVGICLKLD WSYLMVHAMRSMSSIQNSAITY*ASPQSIIF*FLTFGVSLVLTPSALRIWSL*VAVCIAAFRCIMMLLLKYIFI*EPSK+LI+NLPRRNCVSLST+ LEGRLNSLRILLHLS*VVEEVALC Subject 758 CSLLRMVTGVKCIHNHCQVGICLKLDLWSYLMVHAMRSMSSIQNSAITY*ASPQSIIF*FLTFGVSLVLTPSALRIWSL*VAVCIAAFRCIMMLLLKYIFI*EPSKSLIKNLPRRNCVSLSTNQLEGRLNSLRILLHLS*VVEEVALC 1201
Range 6: 877 to 1200 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
234.8 bits(506) | 0.0 | 104/108(96%) | 0/108(0%) | Minus/Minus |
Query 122 QRATSSTTYDK*SKILNEFNLPSSRLVDKLTQFRLGRFLIRFFEGSQIKIYFSNNIMMHRKAAMHTAT*RLQILNADGVKTRETPNVRN*KIIDWGEAQ*VMAEF*ME 445 QRATSSTTYDK*SKILNEFNLPSS VDKLTQFRLGRF IR FEGSQIKIYFSNNIMMHRKAAMHTAT*RLQILNADGVKTRETPNVRN*KIIDWGEAQ*VMAEF*ME Subject 877 QRATSSTTYDK*SKILNEFNLPSSWFVDKLTQFRLGRFFIRLFEGSQIKIYFSNNIMMHRKAAMHTAT*RLQILNADGVKTRETPNVRN*KIIDWGEAQ*VMAEF*ME 1200
Rupestris stem pitting associated virus strain Syrah, complete genome
Sequence ID: AY368590.1 Length: 8742 Number of Matches: 7
Range 1: 757 to 1203 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
353.9 bits(766) | 0.0 | 146/149(98%) | 0/149(0%) | Plus/Plus |
Query 2 MLFAPDGNWCEMYSQPLSSRYLLKARSVVLSDGSRYAVDVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL 448 MLFAPDGNWCEMYSQPLSSRYLLKA+SVVLSDGSRYAVDVLHSKFCHHLLSFTPI+NLLVSNIRCFSGFDAIGIKDLEPL RGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL Subject 757 MLFAPDGNWCEMYSQPLSSRYLLKAKSVVLSDGSRYAVDVLHSKFCHHLLSFTPISNLLVSNIRCFSGFDAIGIKDLEPLIRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL 1203
Range 2: 756 to 1202 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
333.7 bits(722) | 0.0 | 145/149(97%) | 0/149(0%) | Minus/Minus |
Query 1 SREPLLPQLMTSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCIPRLRGSRSLMPMASKPEKHRMLETRRLLIGVKLNK*WQNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKSI 447 SREPLLPQL+TSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLC+PR+RGSRSLMPMASKPEKHRMLETRRLLIGVKLNK WQNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKSI Subject 756 SREPLLPQLITSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRIRGSRSLMPMASKPEKHRMLETRRLLIGVKLNKWWQNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKSI 1202
Range 3: 758 to 1201 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
285.6 bits(617) | 0.0 | 128/148(86%) | 0/148(0%) | Minus/Minus |
Query 3 AESHFFHNL*QVKQNPQ*I*SPFQ*ACR*ADAISPRQIPYQVF*GFSNKDIF**QHHDAPESSYAYRDLEAPDP*CRWRQNQRNTEC*KLEDY*LG*SSISDGRILNGGHRPHSVNHQIRPLI*L*ANTYLTMVVNTFHTSYHPEQRA 446 A SHFFHNL*Q KQN Q*I*S Q*ACR*ADAISPRQIPYQ F* FSN+ IF**QHHD PESSYA R+LEAPD *CRWRQN+RNTEC*K EDY*LG*SSIS GRILNG HRPHSVNH IRP I L*ANTYLTMVVNTFHTSYHPEQRA Subject 758 AGSHFFHNL*QAKQNLQ*I*SLSQ*ACR*ADAISPRQIPYQAF*EFSNRGIF**QHHDVPESSYACRELEAPDL*CRWRQNRRNTEC*KPEDY*LG*SSISGGRILNGEHRPHSVNHPIRPQIWL*ANTYLTMVVNTFHTSYHPEQRA 1201
Range 4: 756 to 1202 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
281.9 bits(609) | 0.0 | 126/149(85%) | 0/149(0%) | Plus/Plus |
Query 1 NALCSGW*LV*NVFTTIVK*VFA*S*ISGLI*WFTLCGRCPPFKILPSLIELHPNQ*SSSF*HSVFLWF*RHRH*GSGASKSRYA*LLSGAS*CCY*NISLFENPQKT**GICRGEIASAYRQAYWKGD*IH*GFCFTCHKLWKKWLSA 447 NALCSGW*LV*NVFTTIVK*VFA*S I GLI WFTLCGRC PFKILP LIEL+PN *SS F*HSVFL F*RHRH* SGAS SR+A*LLSG S*CCY*NI LFEN K **GICRGEIASAYRQAYW+ D*IH* FCF C+KLWKKWL A Subject 756 NALCSGW*LV*NVFTTIVK*VFA*SQICGLIGWFTLCGRCSPFKILPPLIELYPN**SSGF*HSVFLRF*RHRH*RSGASNSRHA*LLSGTS*CCY*NIPLFENS*KA**GICRGEIASAYRQAYWERD*IH*RFCFACYKLWKKWLPA 1202
Range 5: 758 to 1201 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
266.4 bits(575) | 0.0 | 122/148(82%) | 0/148(0%) | Plus/Plus |
Query 3 CSLLRMVTGVKCIHNHCQVGICLKLDQWSYLMVHAMRSMSSIQNSAITY*ASPQSIIF*FLTFGVSLVLTPSALRIWSL*VAVCIAAFRCIMMLLLKYIFI*EPSKNLIRNLPRRNCVSLSTSLLEGRLNSLRILLHLS*VVEEVALC 446 CSLLRMVTGVKCIHNHCQVGICLK + WSY MVHAMRSM SIQNSA TY*A PQ +IF FLTFGVS VLTPSAL+IWSL* A CIAAFR IMMLLLKY I*E K+LIRNLPRRNCVSLSTSLL RLNSL+ILL L *VVEEVA C Subject 758 CSLLRMVTGVKCIHNHCQVGICLKPNLWSYRMVHAMRSMFSIQNSATTY*ALPQLVIFWFLTFGVSPVLTPSALKIWSL*FAACIAAFRYIMMLLLKYTSI*ELLKSLIRNLPRRNCVSLSTSLLGERLNSLKILLRLL*VVEEVAPC 1201
Range 6: 877 to 1200 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
196.7 bits(423) | 0.0 | 87/108(81%) | 0/108(0%) | Minus/Minus |
Query 122 QRATSSTTYDK*SKILNEFNLPSSRLVDKLTQFRLGRFLIRFFEGSQIKIYFSNNIMMHRKAAMHTAT*RLQILNADGVKTRETPNVRN*KIIDWGEAQ*VMAEF*ME 445 Q ATSSTTY+K SKI NEFNL SRLVDKLTQFRLGRFLIR F+ SQI++YFSNNIMM+RKAAMH A *RLQI NADGVKT ETPNVRN KI +WG+AQ*V+AEF*ME Subject 877 QGATSSTTYNKRSKIFNEFNLSPSRLVDKLTQFRLGRFLIRLFKSSQIEVYFSNNIMMYRKAAMHAAN*RLQIFNADGVKTGETPNVRNQKITNWGKAQ*VVAEF*ME 1200
Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome
Sequence ID: JX559646.1 Length: 8726 Number of Matches: 7
Range 1: 757 to 1203 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
338.8 bits(733) | 0.0 | 138/149(93%) | 0/149(0%) | Plus/Plus |
Query 2 MLFAPDGNWCEMYSQPLSSRYLLKARSVVLSDGSRYAVDVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL 448 +LFAPDGNW EMYSQPLS RYLLKARSVVL DGSRY+VD++HSKFCHHLLSFTPI NLL SN+RCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDF+SLVISCGRSGSLL Subject 757 LLFAPDGNWNEMYSQPLSCRYLLKARSVVLPDGSRYSVDIIHSKFCHHLLSFTPIGNLLTSNMRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFSSLVISCGRSGSLL 1203
Range 2: 759 to 1202 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
272.3 bits(588) | 0.0 | 121/148(82%) | 0/148(0%) | Minus/Minus |
Query 4 SREPLLPQLMTSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCIPRLRGSRSLMPMASKPEKHRMLETRRLLIGVKLNK*WQNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKS 447 S+EPLLPQL+T+E KSSMN ISLPVGLSIS*R+FASADSLSGFLRVLK*RYILVTTS*CTGKQLC+PRLRGSRS MP+ASKPEKH M E +RL +GVKL+K WQNFE ST *REPS TTDLA SKYL D GCEYIS QLPSGAKS Subject 759 SKEPLLPQLITNEEKSSMNFISLPVGLSIS*RSFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSRSFMPIASKPEKHLMFEVKRLPMGVKLSKWWQNFE*MISTE*REPSGSTTDLAFSKYLHDKGCEYISFQLPSGAKS 1202
Range 3: 759 to 1205 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
120.2 bits(256) | 0.0 | 66/149(44%) | 0/149(0%) | Plus/Plus |
Query 4 ALCSGW*LV*NVFTTIVK*VFA*S*ISGLI*WFTLCGRCPPFKILPSLIELHPNQ*SSSF*HSVFLWF*RHRH*GSGASKSRYA*LLSGAS*CCY*NISLFENPQKT**GICRGEIASAYRQAYWKGD*IH*GFCFTCHKLWKKWLSAF 450 ALCS W L *+V TT V + *I G * TL KILP L LHP++ S H VF WF* +RH GS SKS +A L S AS*CC +I L ++ + G+C G+ +S Y A+ + + IH*GF +KLW++WL A+ Subject 759 ALCSRWQLE*DVLTTFVMQILTEG*ICGTA*RLTLLS*YHSLKILPPLA*LHPHRQSFDLKHEVFFWF*CNRHKGS*TSKSWHAQLFSSAS*CCNQDIPLLKDS*EARQGVC*GKASSTY**AHRERNKIH*GFFLISYKLWEEWLFAY 1205
Range 4: 758 to 1201 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
118.8 bits(253) | 0.0 | 69/148(47%) | 0/148(0%) | Plus/Plus |
Query 3 CSLLRMVTGVKCIHNHCQVGICLKLDQWSYLMVHAMRSMSSIQNSAITY*ASPQSIIF*FLTFGVSLVLTPSALRIWSL*VAVCIAAFRCIMMLLLKYIFI*EPSKNLIRNLPRRNCVSLSTSLLEGRLNSLRILLHLS*VVEEVALC 446 CSLL+M TG++C HN C +LD W L HA + +S QNSA T ASP IF* T GV LVL A RI +L*V C F+CIMML +Y F * ++ R+L R++ V+L S + NSLRI H * V VALC Subject 758 CSLLQMATGMRCTHNLCHADTY*RLDLWYCLTAHATQLISFTQNSATTCLASPP*AIF*PQT*GVFLVLMQ*A*RILNL*VVACTVVFQCIMML*PRYTFT*GLLRSQTRSLLRQSFVNLLISPQGEK*NSLRIFPH*L*AVGGVALC 1201
Range 5: 880 to 1203 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
103.7 bits(220) | 0.0 | 52/108(48%) | 0/108(0%) | Minus/Minus |
Query 125 KQRATSSTTYDK*SKILNEFNLPSSRLVDKLTQFRLGRFLIRFFEGSQIKIYFSNNIMMHRKAAMHTAT*RLQILNADGVKTRETPNVRN*KIIDWGEAQ*VMAEF*M 448 KQRAT T Y+ * KILNEF L++KLT+ L R L+ + +K+Y NIMMH K +H T*R +IL A +KTR+TP+V KI GEA+ V+AEF*+ Subject 880 KQRATPPTAYN**GKILNEFYFSPCGLINKLTKLCLSRLLVWLLKSP*VKVYLGYNIMMHWKTTVHATT*RFKILYAYCIKTRKTPHV*GQKIAYGGEAKQVVAEF*V 1203
Range 6: 758 to 1126 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
92.3 bits(195) | 0.0 | 54/123(44%) | 0/123(0%) | Minus/Minus |
Query 3 ACR*ADAISPRQIPYQVF*GFSNKDIF**QHHDAPESSYAYRDLEAPDP*CRWRQNQRNTEC*KLEDY*LG*SSISDGRILNGGHRPHSVNHQIRPLI*L*ANTYLTMVVNTFHTSYHPEQRA 371 A +* D P+Q P * +K I QHHDA E++ A DLE DP C QNQ+NT C + +D G*S S GRIL+ ++ SV+ Q P I* + +T VV+T H+S H EQRA Subject 758 AYQ*VDEALPQQTPCLAS*ESLSKGISWLQHHDALENNCACHDLEVQDPLCLLHQNQKNTSCLRSKDCLWG*S*ASGGRILSE*YQLSSVSRQAVPQI*PSVSICMTKVVSTSHSSCHLEQRA 1126
Rupestris stem pitting associated virus strain SG1, complete genome
Sequence ID: AY881626.1 Length: 8742 Number of Matches: 7
Range 1: 757 to 1203 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
338.3 bits(732) | 0.0 | 138/149(93%) | 0/149(0%) | Plus/Plus |
Query 2 MLFAPDGNWCEMYSQPLSSRYLLKARSVVLSDGSRYAVDVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL 448 +LFAPDGNW EMYSQPLS RYLLKARSVVL DGSRY VD++HSKFCHHLLSFTPI NLL SN+RCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDF+SLVISCGRSGSLL Subject 757 LLFAPDGNWNEMYSQPLSCRYLLKARSVVLPDGSRYLVDIIHSKFCHHLLSFTPIGNLLTSNLRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFSSLVISCGRSGSLL 1203
Range 2: 759 to 1202 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
269.6 bits(582) | 0.0 | 120/148(81%) | 0/148(0%) | Minus/Minus |
Query 4 SREPLLPQLMTSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCIPRLRGSRSLMPMASKPEKHRMLETRRLLIGVKLNK*WQNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKS 447 S+EPLLPQL+T+E KSSMN ISLPVGLSIS*R+FASADSLSGFLRVLK*RYILVTTS*CTGKQLC+PRLRGSRS MP+ASKPEKH E +RL +GVKL+K WQNFE ST *REPS TTDLA SKYL D GCEYIS QLPSGAKS Subject 759 SKEPLLPQLITNEEKSSMNFISLPVGLSIS*RSFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSRSFMPIASKPEKHLKFEVKRLPMGVKLSKWWQNFE*MISTK*REPSGSTTDLAFSKYLHDKGCEYISFQLPSGAKS 1202
Range 3: 760 to 1203 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
117.0 bits(249) | 0.0 | 69/148(47%) | 0/148(0%) | Minus/Minus |
Query 5 KQRATSSTTYDK*SKILNEFNLPSSRLVDKLTQFRLGRFLIRFFEGSQIKIYFSNNIMMHRKAAMHTAT*RLQILNADGVKTRETPNVRN*KIIDWGEAQ*VMAEF*MEXXXXXXXXXXXDH*SSFKQIPT*QWL*IHFTPVTIRSKE 448 KQRAT T Y+ * KILNEF L++KLT+ L R L+ + +K+Y +IMMH K +H *R +IL A +KTR+TP V KI GEA+ V+AEF*+ DI+++A* +R H SS + + *Q L*+H PV I SKE Subject 760 KQRATPPTAYN**GKILNEFYFSPCGLINKLTKLCLSRLLVWLLKSP*VKVYLGYDIMMHWKTTVHATA*RFKILYAYCIKTRKTPQV*GQKIAYGGEAKQVVAEF*VNDINQVA*AVRQYHRSSLQ*VSA*QRL*VHLIPVAIWSKE 1203
Range 4: 758 to 1201 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.4 bits(239) | 0.0 | 67/148(45%) | 0/148(0%) | Plus/Plus |
Query 3 CSLLRMVTGVKCIHNHCQVGICLKLDQWSYLMVHAMRSMSSIQNSAITY*ASPQSIIF*FLTFGVSLVLTPSALRIWSL*VAVCIAAFRCIMMLLLKYIFI*EPSKNLIRNLPRRNCVSLSTSLLEGRLNSLRILLHLS*VVEEVALC 446 CSLL+M TG++C HN C +LD W L HA +S QNSA T ASP IF* T GV LVL A RI +L* C F+CIMM +Y F * ++ R+L R++ V+L S + NSLRI H * V VALC Subject 758 CSLLQMATGMRCTHNLCHADTY*RLDLWYCLTAHATWLISFTQNSATTCLASPP*AIF*PQT*GVFLVLMQ*A*RILNL*AVACTVVFQCIMMS*PRYTFT*GLLRSQTRSLLRQSFVNLLISPQGEK*NSLRIFPH*L*AVGGVALC 1201
Range 5: 759 to 1205 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
110.1 bits(234) | 0.0 | 64/149(43%) | 0/149(0%) | Plus/Plus |
Query 4 ALCSGW*LV*NVFTTIVK*VFA*S*ISGLI*WFTLCGRCPPFKILPSLIELHPNQ*SSSF*HSVFLWF*RHRH*GSGASKSRYA*LLSGAS*CCY*NISLFENPQKT**GICRGEIASAYRQAYWKGD*IH*GFCFTCHKLWKKWLSAF 450 ALCS W L *+V TT V + *I G * TL G KILP L LHP++ S VF WF* +RH GS SK +A L S AS*C +I L ++ + G+C G+ +S Y A+ + + IH*GF +KLW++WL A+ Subject 759 ALCSRWQLE*DVLTTFVMQILTEG*ICGTA*RLTLLG*YHSLKILPPLA*LHPHRQSFDLKLEVFFWF*CNRHKGS*TSKPWHAQLFSSAS*CRNQDIPLLKDS*EARQGVC*GKASSTY**AHRERNKIH*GFFLISYKLWEEWLFAY 1205
Range 6: 758 to 1126 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
87.2 bits(184) | 0.0 | 52/123(42%) | 0/123(0%) | Minus/Minus |
Query 3 ACR*ADAISPRQIPYQVF*GFSNKDIF**QHHDAPESSYAYRDLEAPDP*CRWRQNQRNTEC*KLEDY*LG*SSISDGRILNGGHRPHSVNHQIRPLI*L*ANTYLTMVVNTFHTSYHPEQRA 371 A +* D P+Q P * +K I +HHDA E++ A LE DP C QNQ+NT + +D G*S S GRIL+ ++P SV+ Q P I* + +T VV+T H+S H EQRA Subject 758 AYQ*VDEALPQQTPCLAS*ESLSKGISWLRHHDALENNCACHGLEVQDPLCLLHQNQKNTSSLRSKDCLWG*S*ASGGRILSE*YQPSSVSRQAVPQI*PSVSICMTKVVSTSHSSCHLEQRA 1126
Grapevine rupestris stem pitting associated virus isolate GRSPaV WA, complete genome
Sequence ID: KC427107.1 Length: 8742 Number of Matches: 7
Range 1: 757 to 1203 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
337.9 bits(731) | 0.0 | 138/149(93%) | 0/149(0%) | Plus/Plus |
Query 2 MLFAPDGNWCEMYSQPLSSRYLLKARSVVLSDGSRYAVDVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL 448 +LFAPDGNW EMYSQPLS RYLLKARSVVL DGSRY VD++HSKFCHHLLSFTPI NLL SN+RCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDF+SLVISCGRSGSLL Subject 757 LLFAPDGNWNEMYSQPLSCRYLLKARSVVLPDGSRYLVDIIHSKFCHHLLSFTPIGNLLTSNMRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFSSLVISCGRSGSLL 1203
Range 2: 759 to 1202 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
272.3 bits(588) | 0.0 | 121/148(82%) | 0/148(0%) | Minus/Minus |
Query 4 SREPLLPQLMTSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCIPRLRGSRSLMPMASKPEKHRMLETRRLLIGVKLNK*WQNFEWRTSTA*REPSDKTTDLALSKYLLDNGCEYISHQLPSGAKS 447 S+EPLLPQL+T+E KSSMN ISLPVGLSIS*R+FASADSLSGFLRVLK*RYILVTTS*CTGKQLC+PRLRGSRS MP+ASKPEKH M E +RL +GVKL+K WQNFE ST *REPS TTDLA SKYL D GCEYIS QLPSGAKS Subject 759 SKEPLLPQLITNEEKSSMNFISLPVGLSIS*RSFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSRSFMPIASKPEKHLMFEVKRLPMGVKLSKWWQNFE*MISTK*REPSGSTTDLAFSKYLHDKGCEYISFQLPSGAKS 1202
Range 3: 760 to 1203 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
117.5 bits(250) | 0.0 | 69/148(47%) | 0/148(0%) | Minus/Minus |
Query 5 KQRATSSTTYDK*SKILNEFNLPSSRLVDKLTQFRLGRFLIRFFEGSQIKIYFSNNIMMHRKAAMHTAT*RLQILNADGVKTRETPNVRN*KIIDWGEAQ*VMAEF*MEXXXXXXXXXXXDH*SSFKQIPT*QWL*IHFTPVTIRSKE 448 KQRAT T Y+ * KILNEF L++KLT+ L R L+ + +K+Y +IMMH K +H *R +IL A +KTR+TP+V KI GEA+ V+AEF*+ DI+++A* +R H SS + + *Q L*+H PV I SKE Subject 760 KQRATPPTAYN**GKILNEFYFSPCGLINKLTKLCLSRLLVWLLKSP*VKVYLGYDIMMHWKTTVHATA*RFKILYAYCIKTRKTPHV*GQKIAYGGEAKQVVAEF*VNDINQVA*AVRQYHRSSLQ*VSA*QRL*VHLIPVAIWSKE 1203
Range 4: 759 to 1205 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
115.2 bits(245) | 0.0 | 65/149(44%) | 0/149(0%) | Plus/Plus |
Query 4 ALCSGW*LV*NVFTTIVK*VFA*S*ISGLI*WFTLCGRCPPFKILPSLIELHPNQ*SSSF*HSVFLWF*RHRH*GSGASKSRYA*LLSGAS*CCY*NISLFENPQKT**GICRGEIASAYRQAYWKGD*IH*GFCFTCHKLWKKWLSAF 450 ALCS W L *+V TT V + *I G * TL G KILP L LHP++ S H VF WF* +RH GS SK +A L S AS*C +I L ++ + G+C G+ +S Y A+ + + IH*GF +KLW++WL A+ Subject 759 ALCSRWQLE*DVLTTFVMQILTEG*ICGTA*RLTLLG*YHSLKILPPLA*LHPHRQSFDLKHEVFFWF*CNRHKGS*TSKPWHAQLFSSAS*CRNQDIPLLKDS*EARQGVC*GKASSTY**AHRERNKIH*GFFLISYKLWEEWLFAY 1205
Range 5: 758 to 1201 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.4 bits(239) | 0.0 | 67/148(45%) | 0/148(0%) | Plus/Plus |
Query 3 CSLLRMVTGVKCIHNHCQVGICLKLDQWSYLMVHAMRSMSSIQNSAITY*ASPQSIIF*FLTFGVSLVLTPSALRIWSL*VAVCIAAFRCIMMLLLKYIFI*EPSKNLIRNLPRRNCVSLSTSLLEGRLNSLRILLHLS*VVEEVALC 446 CSLL+M TG++C HN C +LD W L HA +S QNSA T ASP IF* T GV LVL A RI +L* C F+CIMM +Y F * ++ R+L R++ V+L S + NSLRI H * V VALC Subject 758 CSLLQMATGMRCTHNLCHADTY*RLDLWYCLTAHATWLISFTQNSATTCLASPP*AIF*PQT*GVFLVLMQ*A*RILNL*AVACTVVFQCIMMS*PRYTFT*GLLRSQTRSLLRQSFVNLLISPQGEK*NSLRIFPH*L*AVGGVALC 1201
Range 6: 758 to 1126 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
91.8 bits(194) | 0.0 | 53/123(43%) | 0/123(0%) | Minus/Minus |
Query 3 ACR*ADAISPRQIPYQVF*GFSNKDIF**QHHDAPESSYAYRDLEAPDP*CRWRQNQRNTEC*KLEDY*LG*SSISDGRILNGGHRPHSVNHQIRPLI*L*ANTYLTMVVNTFHTSYHPEQRA 371 A +* D P+Q P * +K I +HHDA E++ A LE DP C QNQ+NT C + +D G*S S GRIL+ ++P SV+ Q P I* + +T VV+T H+S H EQRA Subject 758 AYQ*VDEALPQQTPCLAS*ESLSKGISWLRHHDALENNCACHGLEVQDPLCLLHQNQKNTSCLRSKDCLWG*S*ASGGRILSE*YQPSSVSRQAVPQI*PSVSICMTKVVSTSHSSCHLEQRA 1126
Nucleotide Sequence (396 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
288.4 | 1530.7 | 36% | 3.132e-76 | 94% | FR691076.1 | |
285.2 | 1479.8 | 36% | 2.893e-75 | 89% | JX559646.1 | |
285.2 | 1462.4 | 36% | 2.893e-75 | 86% | KC427107.1 | |
284.7 | 1560.0 | 36% | 3.974e-75 | 95% | AB277784.1 | |
284.7 | 1476.2 | 36% | 3.974e-75 | 89% | AY881626.1 |
Alignments
Grapevine rupestris stem pitting associated virus complete genome, genomic RNA, isolate GRSPaV MG
Sequence ID: FR691076.1 Length: 8749 Number of Matches: 8
Range 1: 7503 to 7889 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
288.4 bits(623) | 0.0 | 125/129(97%) | 0/129(0%) | Minus/Plus |
Query 5 *LHSYMYCLFGILVLVGIAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTVREVLGGLKALGISHITEEIDYRC*IG*MASQVGKLPGESNEAFEARLKSLELARAQKQPEGPNTPNT 391 *LHSYMYCLFGILVLVGIAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTVREVLGGLKALG+SH TEEIDYRC*IG*MASQVGKLPGESNEAFEARLKSLELARAQKQPEG NTP T Subject 7503 *LHSYMYCLFGILVLVGIAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTVREVLGGLKALGVSHTTEEIDYRC*IG*MASQVGKLPGESNEAFEARLKSLELARAQKQPEGSNTPPT 7889
Range 2: 7505 to 7882 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
281.9 bits(609) | 0.0 | 123/126(98%) | 0/126(0%) | Plus/Minus |
Query 12 GVFGPSGCF*ALANSSDFSRASNASFDSPGSLPT*LAI*PI*QR*SISSVIWLIPKAFKPPNTSLTVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIAIPTKTRIPNRQYMYECN 389 GVF PSGCF*ALANSSDFSRASNASFDSPGSLPT*LAI*PI*QR*SISSV+WL PKAFKPPNTSLTVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIAIPTKTRIPNRQYMYECN Subject 7505 GVFEPSGCF*ALANSSDFSRASNASFDSPGSLPT*LAI*PI*QR*SISSVVWLTPKAFKPPNTSLTVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIAIPTKTRIPNRQYMYECN 7882
Range 3: 7502 to 7888 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
273.2 bits(590) | 0.0 | 121/129(94%) | 0/129(0%) | Minus/Plus |
Query 6 VIAFIHVLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLYQGHWRVYFD*KLWPKRGPCINSEGGVGRFEGFRN*PYY*RXXXXXXXXXNGESGW*APRRIK*GI*SPAEITGVG*SSKAARRPKHTQH 392 +IAFIHVLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLYQG+WRVYFD*KLWPKRGPC+NSEGGVGRFEGFR *PYY*RN*LSLLNWLNGES W*APRRIK*GI*SPAEITGVG*SSKAARR KHT + Subject 7502 LIAFIHVLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLYQGYWRVYFD*KLWPKRGPCVNSEGGVGRFEGFRG*PYY*RN*LSLLNWLNGESSW*APRRIK*GI*SPAEITGVG*SSKAARRLKHTTY 7888
Range 4: 7504 to 7731 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
182.5 bits(392) | 0.0 | 73/76(96%) | 0/76(0%) | Plus/Minus |
Query 163 YG*FLKPSNLPTPPSLLMQGPRLGHNFQSK*TLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAI 390 YG* LKPSNLPTPPSLL QGPRLGHNFQSK*TLQ P**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAI Subject 7504 YG*PLKPSNLPTPPSLLTQGPRLGHNFQSK*TLQ*P**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAI 7731
Range 5: 7771 to 7881 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
82.2 bits(173) | 0.0 | 35/37(95%) | 0/37(0%) | Plus/Minus |
Query 13 VCLGLLAAFEL*PTPVISAGLQMPHLIRRGAYQPDSP 123 VCL LLAAFEL*PTPVISAGLQMPHLIRRGAYQ DSP Subject 7771 VCLSLLAAFEL*PTPVISAGLQMPHLIRRGAYQLDSP 7881
Range 6: 7503 to 7880 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
215.5 bits(464) | 0.0 | 121/126(96%) | 0/126(0%) | Plus/Minus |
Query 14 CVWAFWXXXXXXXXXXXXPGFKCLI*FAGEXXXXXXXXXXXXXIINFFSNMANS*SLQTSQHLPHC*CKGLAWATIFNQNRLSSGPDKATLVTATTVVYMSKDLDGNCNSYQDQNSKQTIHV*MQL 391 CV AFWLLLSSSQLQ*FQPGFKCLI*FAGELTNLTRHLTNLTTIINFFS+MAN *SLQTSQHLPHC* KGLAWATIFNQNRLSS PDKATLVTATTVVYMSKDLDGNCNSYQDQNSKQTIHV*MQL Subject 7503 CV*AFWLLLSSSQLQ*FQPGFKCLI*FAGELTNLTRHLTNLTTIINFFSSMANP*SLQTSQHLPHC*RKGLAWATIFNQNRLSSSPDKATLVTATTVVYMSKDLDGNCNSYQDQNSKQTIHV*MQL 7880
Range 7: 7504 to 7710 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
126.6 bits(270) | 0.0 | 67/69(97%) | 0/69(0%) | Minus/Plus |
Query 184 NCIHTCIVCLEFWSW*ELQLPSKSLLMXXXXXXXXXXALSGPLESLF*LKIVAQARPLHQQ*GRCWEV* 390 NCIHTCIVCLEFWSW*ELQLPSKSLLM*TTVVAVTKVALSG LESLF*LKIVAQARPL QQ*GRCWEV* Subject 7504 NCIHTCIVCLEFWSW*ELQLPSKSLLM*TTVVAVTKVALSGLLESLF*LKIVAQARPLRQQ*GRCWEV* 7710
Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome
Sequence ID: JX559646.1 Length: 8726 Number of Matches: 8
Range 1: 7503 to 7889 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
285.2 bits(616) | 0.0 | 123/129(95%) | 0/129(0%) | Minus/Plus |
Query 5 *LHSYMYCLFGILVLVGIAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTVREVLGGLKALGISHITEEIDYRC*IG*MASQVGKLPGESNEAFEARLKSLELARAQKQPEGPNTPNT 391 *LHSYMYCLFGILVLVGIAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTV+EVLGGLKALGISH TEEIDYRC*IG*MASQ+GKLPGESNEAFEARLKSLELAR QKQPEG NTP T Subject 7503 *LHSYMYCLFGILVLVGIAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGISHTTEEIDYRC*IG*MASQIGKLPGESNEAFEARLKSLELARTQKQPEGSNTPPT 7889
Range 2: 7505 to 7882 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
275.5 bits(595) | 0.0 | 120/126(95%) | 0/126(0%) | Plus/Minus |
Query 12 GVFGPSGCF*ALANSSDFSRASNASFDSPGSLPT*LAI*PI*QR*SISSVIWLIPKAFKPPNTSLTVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIAIPTKTRIPNRQYMYECN 389 GVF PSGCF* LANSSDFSRASNASFDSPGSLP *LAI*PI QR*SISSV+WLIPKAFKPPNTS TVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIAIPTKTRIPNRQYMYECN Subject 7505 GVFEPSGCF*VLANSSDFSRASNASFDSPGSLPI*LAI*PIQQR*SISSVVWLIPKAFKPPNTSFTVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIAIPTKTRIPNRQYMYECN 7882
Range 3: 7502 to 7888 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
260.4 bits(562) | 0.0 | 116/129(90%) | 0/129(0%) | Minus/Plus |
Query 6 VIAFIHVLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLYQGHWRVYFD*KLWPKRGPCINSEGGVGRFEGFRN*PYY*RXXXXXXXXXNGESGW*APRRIK*GI*SPAEITGVG*SSKAARRPKHTQH 392 +IAFIHVLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLYQGHWRV FD*KLWPK GPC+N +GGVGRFEGFR+*PYY*RN*LSLLNWLNG+S W*APRRIK*GI*SPAEITGVG*+SKAARR KHT + Subject 7502 LIAFIHVLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLYQGHWRVNFD*KLWPK*GPCVNRKGGVGRFEGFRD*PYY*RN*LSLLNWLNGKSDW*APRRIK*GI*SPAEITGVG*NSKAARRLKHTAY 7888
Range 4: 7504 to 7731 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
180.2 bits(387) | 0.0 | 70/76(92%) | 0/76(0%) | Plus/Minus |
Query 163 YG*FLKPSNLPTPPSLLMQGPRLGHNFQSK*TLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAI 390 YG* LKPSNLPTPP L QGP LGHNFQSK TLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAI Subject 7504 YG*SLKPSNLPTPPLRLTQGPHLGHNFQSKLTLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAI 7731
Range 5: 7771 to 7881 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.5 bits(165) | 0.0 | 33/37(89%) | 0/37(0%) | Plus/Minus |
Query 13 VCLGLLAAFEL*PTPVISAGLQMPHLIRRGAYQPDSP 123 VCL LLAAFE *PTPVISAGLQMPHLIRRGAYQ D P Subject 7771 VCLSLLAAFEF*PTPVISAGLQMPHLIRRGAYQSDLP 7881
Range 6: 7503 to 7880 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
199.5 bits(429) | 0.0 | 115/126(91%) | 0/126(0%) | Plus/Minus |
Query 14 CVWAFWXXXXXXXXXXXXPGFKCLI*FAGEXXXXXXXXXXXXXIINFFSNMANS*SLQTSQHLPHC*CKGLAWATIFNQNRLSSGPDKATLVTATTVVYMSKDLDGNCNSYQDQNSKQTIHV*MQL 391 CV AFWLLLSSSQLQ*FQPGFKCLI*FAGELTNLT HLTN TTIINFFS+MAN *SLQTSQHL + * KGL WATIFNQN LSSGPDKATLVTATTVVYMSKDLDGNCNSYQDQNSKQTIHV*MQL Subject 7503 CV*AFWLLLSSSQLQ*FQPGFKCLI*FAGELTNLTCHLTNSTTIINFFSSMANP*SLQTSQHLLYG*RKGLTWATIFNQN*LSSGPDKATLVTATTVVYMSKDLDGNCNSYQDQNSKQTIHV*MQL 7880
Range 7: 7504 to 7710 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
120.2 bits(256) | 0.0 | 64/69(93%) | 0/69(0%) | Minus/Plus |
Query 184 NCIHTCIVCLEFWSW*ELQLPSKSLLMXXXXXXXXXXALSGPLESLF*LKIVAQARPLHQQ*GRCWEV* 390 NCIHTCIVCLEFWSW*ELQLPSKSLLM*TTVVAVTKVALSGPLES F*LKIVAQ RPL Q * RCWEV* Subject 7504 NCIHTCIVCLEFWSW*ELQLPSKSLLM*TTVVAVTKVALSGPLESQF*LKIVAQVRPLRQP*RRCWEV* 7710
Grapevine rupestris stem pitting associated virus isolate GRSPaV WA, complete genome
Sequence ID: KC427107.1 Length: 8742 Number of Matches: 8
Range 1: 7503 to 7889 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
285.2 bits(616) | 0.0 | 123/129(95%) | 0/129(0%) | Minus/Plus |
Query 5 *LHSYMYCLFGILVLVGIAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTVREVLGGLKALGISHITEEIDYRC*IG*MASQVGKLPGESNEAFEARLKSLELARAQKQPEGPNTPNT 391 *LHSYMYCLFGILVLVGIAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTV+EVLGGLKALGISH TEEIDYRC*IG*MASQ+GKLPGESNEAFEARLKSLELAR QKQPEG NTP T Subject 7503 *LHSYMYCLFGILVLVGIAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGISHTTEEIDYRC*IG*MASQIGKLPGESNEAFEARLKSLELARTQKQPEGTNTPPT 7889
Range 2: 7505 to 7882 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
272.3 bits(588) | 0.0 | 119/126(94%) | 0/126(0%) | Plus/Minus |
Query 12 GVFGPSGCF*ALANSSDFSRASNASFDSPGSLPT*LAI*PI*QR*SISSVIWLIPKAFKPPNTSLTVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIAIPTKTRIPNRQYMYECN 389 GVF PSGCF* LANSSDFSRAS ASFDSPGSLP *LAI*PI QR*SISSV+WLIPKAFKPPNTS TVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIAIPTKTRIPNRQYMYECN Subject 7505 GVFVPSGCF*VLANSSDFSRASKASFDSPGSLPI*LAI*PIQQR*SISSVVWLIPKAFKPPNTSFTVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIAIPTKTRIPNRQYMYECN 7882
Range 3: 7502 to 7888 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
259.0 bits(559) | 0.0 | 115/129(89%) | 0/129(0%) | Minus/Plus |
Query 6 VIAFIHVLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLYQGHWRVYFD*KLWPKRGPCINSEGGVGRFEGFRN*PYY*RXXXXXXXXXNGESGW*APRRIK*GI*SPAEITGVG*SSKAARRPKHTQH 392 +IAFIHVLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLYQGHWRV FD*KLWPK GPC+N +GGVGRFEGFR+*PYY*RN*LSLLNWLNG+S W*APRRIK*G *SPAEITGVG*+SKAARR KHT + Subject 7502 LIAFIHVLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLYQGHWRVNFD*KLWPK*GPCVNRKGGVGRFEGFRD*PYY*RN*LSLLNWLNGKSDW*APRRIK*GF*SPAEITGVG*NSKAARRHKHTAY 7888
Range 4: 7504 to 7731 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
180.2 bits(387) | 0.0 | 70/76(92%) | 0/76(0%) | Plus/Minus |
Query 163 YG*FLKPSNLPTPPSLLMQGPRLGHNFQSK*TLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAI 390 YG* LKPSNLPTPP L QGP LGHNFQSK TLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAI Subject 7504 YG*SLKPSNLPTPPLRLTQGPHLGHNFQSKLTLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAI 7731
Range 5: 7771 to 7881 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
74.4 bits(156) | 0.0 | 32/37(86%) | 0/37(0%) | Plus/Minus |
Query 13 VCLGLLAAFEL*PTPVISAGLQMPHLIRRGAYQPDSP 123 VCL LLAAFE *PTPVISAGLQ PHLIRRGAYQ D P Subject 7771 VCLCLLAAFEF*PTPVISAGLQKPHLIRRGAYQSDLP 7881
Range 6: 7503 to 7880 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
195.8 bits(421) | 0.0 | 114/126(90%) | 0/126(0%) | Plus/Minus |
Query 14 CVWAFWXXXXXXXXXXXXPGFKCLI*FAGEXXXXXXXXXXXXXIINFFSNMANS*SLQTSQHLPHC*CKGLAWATIFNQNRLSSGPDKATLVTATTVVYMSKDLDGNCNSYQDQNSKQTIHV*MQL 391 CV AFWLLLSSSQLQ*FQPGFK LI*FAGELTNLT HLTN TTIINFFS+MAN *SLQTSQHL + * KGL WATIFNQN LSSGPDKATLVTATTVVYMSKDLDGNCNSYQDQNSKQTIHV*MQL Subject 7503 CVCAFWLLLSSSQLQ*FQPGFKSLI*FAGELTNLTCHLTNSTTIINFFSSMANP*SLQTSQHLLYG*RKGLTWATIFNQN*LSSGPDKATLVTATTVVYMSKDLDGNCNSYQDQNSKQTIHV*MQL 7880
Range 7: 7504 to 7710 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
120.2 bits(256) | 0.0 | 64/69(93%) | 0/69(0%) | Minus/Plus |
Query 184 NCIHTCIVCLEFWSW*ELQLPSKSLLMXXXXXXXXXXALSGPLESLF*LKIVAQARPLHQQ*GRCWEV* 390 NCIHTCIVCLEFWSW*ELQLPSKSLLM*TTVVAVTKVALSGPLES F*LKIVAQ RPL Q * RCWEV* Subject 7504 NCIHTCIVCLEFWSW*ELQLPSKSLLM*TTVVAVTKVALSGPLESQF*LKIVAQVRPLRQP*RRCWEV* 7710
Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OE8
Sequence ID: AB277784.1 Length: 2876 Number of Matches: 8
Range 1: 1759 to 2145 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
284.7 bits(615) | 0.0 | 125/129(97%) | 0/129(0%) | Minus/Plus |
Query 5 *LHSYMYCLFGILVLVGIAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTVREVLGGLKALGISHITEEIDYRC*IG*MASQVGKLPGESNEAFEARLKSLELARAQKQPEGPNTPNT 391 *LHSYMYCLFGILVLVGIAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTVREVLGGLKALGISH TEEI YRC*IG*MASQVGKLPGESNEAFEARLKSLELARAQKQPEG NTP T Subject 1759 *LHSYMYCLFGILVLVGIAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTVREVLGGLKALGISHTTEEIVYRC*IG*MASQVGKLPGESNEAFEARLKSLELARAQKQPEGSNTPPT 2145
Range 2: 1761 to 2138 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
282.9 bits(611) | 0.0 | 123/126(98%) | 0/126(0%) | Plus/Minus |
Query 12 GVFGPSGCF*ALANSSDFSRASNASFDSPGSLPT*LAI*PI*QR*SISSVIWLIPKAFKPPNTSLTVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIAIPTKTRIPNRQYMYECN 389 GVF PSGCF*ALANSSDFSRASNASFDSPGSLPT*LAI*PI*QR*+ISSV+WLIPKAFKPPNTSLTVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIAIPTKTRIPNRQYMYECN Subject 1761 GVFEPSGCF*ALANSSDFSRASNASFDSPGSLPT*LAI*PI*QR*TISSVVWLIPKAFKPPNTSLTVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIAIPTKTRIPNRQYMYECN 2138
Range 3: 1758 to 2144 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
280.6 bits(606) | 0.0 | 123/129(95%) | 0/129(0%) | Minus/Plus |
Query 6 VIAFIHVLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLYQGHWRVYFD*KLWPKRGPCINSEGGVGRFEGFRN*PYY*RXXXXXXXXXNGESGW*APRRIK*GI*SPAEITGVG*SSKAARRPKHTQH 392 +IAFIHVLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLYQGHWRVYFD*KLWPKRGPCINSEGGVGRFEGFRN*PYY*RN LSLLNWLNGES W*APRRIK*GI*SPAEITGVG*SSKAARR KHT + Subject 1758 LIAFIHVLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLYQGHWRVYFD*KLWPKRGPCINSEGGVGRFEGFRN*PYY*RNCLSLLNWLNGESSW*APRRIK*GI*SPAEITGVG*SSKAARRLKHTAY 2144
Range 4: 1760 to 1987 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.4 bits(418) | 0.0 | 75/76(99%) | 0/76(0%) | Plus/Minus |
Query 163 YG*FLKPSNLPTPPSLLMQGPRLGHNFQSK*TLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAI 390 YG*FLKPSNLPTPPSLLMQGPRLGHNFQSK*TLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTD+TCMNAI Subject 1760 YG*FLKPSNLPTPPSLLMQGPRLGHNFQSK*TLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDSTCMNAI 1987
Range 5: 2027 to 2137 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
82.2 bits(173) | 0.0 | 35/37(95%) | 0/37(0%) | Plus/Minus |
Query 13 VCLGLLAAFEL*PTPVISAGLQMPHLIRRGAYQPDSP 123 VCL LLAAFEL*PTPVISAGLQMPHLIRRGAYQ DSP Subject 2027 VCLSLLAAFEL*PTPVISAGLQMPHLIRRGAYQLDSP 2137
Range 6: 1759 to 2136 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
222.4 bits(479) | 0.0 | 122/126(97%) | 0/126(0%) | Plus/Minus |
Query 14 CVWAFWXXXXXXXXXXXXPGFKCLI*FAGEXXXXXXXXXXXXXIINFFSNMANS*SLQTSQHLPHC*CKGLAWATIFNQNRLSSGPDKATLVTATTVVYMSKDLDGNCNSYQDQNSKQTIHV*MQL 391 CV AFWLLLSSSQLQ*FQPGFKCLI*FAGELTNLTRHLTNLTTI NFFS+MANS*SLQTSQHLPHC*CKGLAWATIFNQNRLSSGPDKATLVTATTVVYMSKDLDGNCNSYQDQNSKQT+HV*MQL Subject 1759 CV*AFWLLLSSSQLQ*FQPGFKCLI*FAGELTNLTRHLTNLTTINNFFSSMANS*SLQTSQHLPHC*CKGLAWATIFNQNRLSSGPDKATLVTATTVVYMSKDLDGNCNSYQDQNSKQTVHV*MQL 2136
Range 7: 1760 to 1966 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.6 bits(283) | 0.0 | 68/69(99%) | 0/69(0%) | Minus/Plus |
Query 184 NCIHTCIVCLEFWSW*ELQLPSKSLLMXXXXXXXXXXALSGPLESLF*LKIVAQARPLHQQ*GRCWEV* 390 NCIHTC VCLEFWSW*ELQLPSKSLLM*TTVVAVTKVALSGPLESLF*LKIVAQARPLHQQ*GRCWEV* Subject 1760 NCIHTCTVCLEFWSW*ELQLPSKSLLM*TTVVAVTKVALSGPLESLF*LKIVAQARPLHQQ*GRCWEV* 1966
Rupestris stem pitting associated virus strain SG1, complete genome
Sequence ID: AY881626.1 Length: 8742 Number of Matches: 8
Range 1: 7503 to 7889 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
284.7 bits(615) | 0.0 | 122/129(95%) | 0/129(0%) | Minus/Plus |
Query 5 *LHSYMYCLFGILVLVGIAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTVREVLGGLKALGISHITEEIDYRC*IG*MASQVGKLPGESNEAFEARLKSLELARAQKQPEGPNTPNT 391 *LHSYMYCLFGILVLVGIAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALAST++EVLGGLKALGISH TEEIDYRC*IG*MASQ+GKLPGESNEAFEARLKSLELAR QKQPEG NTP T Subject 7503 *LHSYMYCLFGILVLVGIAIAIQILAHVDNSSGSHQGCFIRATGESILIENCGPSEALASTIKEVLGGLKALGISHTTEEIDYRC*IG*MASQIGKLPGESNEAFEARLKSLELARTQKQPEGTNTPPT 7889
Range 2: 7505 to 7882 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
272.3 bits(588) | 0.0 | 119/126(94%) | 0/126(0%) | Plus/Minus |
Query 12 GVFGPSGCF*ALANSSDFSRASNASFDSPGSLPT*LAI*PI*QR*SISSVIWLIPKAFKPPNTSLTVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIAIPTKTRIPNRQYMYECN 389 GVF PSGCF* LANSSDFSRASNASFDSPGSLP *LAI*PI QR*SISSV+WLIPKAFKPPNTS VDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIAIPTKTRIPNRQYMYECN Subject 7505 GVFVPSGCF*VLANSSDFSRASNASFDSPGSLPI*LAI*PIQQR*SISSVVWLIPKAFKPPNTSFMVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIAIPTKTRIPNRQYMYECN 7882
Range 3: 7502 to 7888 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
260.9 bits(563) | 0.0 | 116/129(90%) | 0/129(0%) | Minus/Plus |
Query 6 VIAFIHVLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLYQGHWRVYFD*KLWPKRGPCINSEGGVGRFEGFRN*PYY*RXXXXXXXXXNGESGW*APRRIK*GI*SPAEITGVG*SSKAARRPKHTQH 392 +IAFIHVLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLYQGHWRV FD*KLWPK GPC+N +GGVGRFEGFR+*PYY*RN*LSLLNWLNG+S W*APRRIK*GI*SPAEITGVG*+SKAARR KHT + Subject 7502 LIAFIHVLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLYQGHWRVNFD*KLWPK*GPCVNHKGGVGRFEGFRD*PYY*RN*LSLLNWLNGKSDW*APRRIK*GI*SPAEITGVG*NSKAARRHKHTAY 7888
Range 4: 7504 to 7731 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
180.2 bits(387) | 0.0 | 70/76(92%) | 0/76(0%) | Plus/Minus |
Query 163 YG*FLKPSNLPTPPSLLMQGPRLGHNFQSK*TLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAI 390 YG* LKPSNLPTPP L QGP LGHNFQSK TLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAI Subject 7504 YG*SLKPSNLPTPPLWLTQGPHLGHNFQSKLTLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAI 7731
Range 5: 7771 to 7881 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
77.1 bits(162) | 0.0 | 33/37(89%) | 0/37(0%) | Plus/Minus |
Query 13 VCLGLLAAFEL*PTPVISAGLQMPHLIRRGAYQPDSP 123 VCL LLAAFE *PTPVISAGLQMPHLIRRGAYQ D P Subject 7771 VCLCLLAAFEF*PTPVISAGLQMPHLIRRGAYQSDLP 7881
Range 6: 7503 to 7880 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
200.4 bits(431) | 0.0 | 115/126(91%) | 0/126(0%) | Plus/Minus |
Query 14 CVWAFWXXXXXXXXXXXXPGFKCLI*FAGEXXXXXXXXXXXXXIINFFSNMANS*SLQTSQHLPHC*CKGLAWATIFNQNRLSSGPDKATLVTATTVVYMSKDLDGNCNSYQDQNSKQTIHV*MQL 391 CV AFWLLLSSSQLQ*FQPGFKCLI*FAGELTNLT HLTN TTIINFFS+MAN *SLQTSQHL + * KGL WATIFNQN LSSGPDKATLVTATTVVYMSKDLDGNCNSYQDQNSKQTIHV*MQL Subject 7503 CVCAFWLLLSSSQLQ*FQPGFKCLI*FAGELTNLTCHLTNSTTIINFFSSMANP*SLQTSQHLLYG*RKGLTWATIFNQN*LSSGPDKATLVTATTVVYMSKDLDGNCNSYQDQNSKQTIHV*MQL 7880
Range 7: 7504 to 7710 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
120.2 bits(256) | 0.0 | 64/69(93%) | 0/69(0%) | Minus/Plus |
Query 184 NCIHTCIVCLEFWSW*ELQLPSKSLLMXXXXXXXXXXALSGPLESLF*LKIVAQARPLHQQ*GRCWEV* 390 NCIHTCIVCLEFWSW*ELQLPSKSLLM*TTVVAVTKVALSGPLES F*LKIVAQ RPL Q * RCWEV* Subject 7504 NCIHTCIVCLEFWSW*ELQLPSKSLLM*TTVVAVTKVALSGPLESQF*LKIVAQVRPLRQP*RRCWEV* 7710