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Queries

Nucleotide Sequence (1655 letters)

Query ID:ds2016-57_12
Query definition:No definition line
Query length:638
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 2 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
166
332
498
664
830
996
1162
1328
1494
1655

Descriptions

Alignments

Ceratobasidium endornavirus B isolate Murdoch 2 polyprotein and ORF2 genes, complete cds

Sequence ID: KX355143.1 Length: 23635 Number of Matches: 2

Range 1: 9098 to 9427 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.4 bits(132) 0.0 33/110(30%) 0/110(0%) Plus/Plus
Query      252  VVTPLDPVSKVTIRVPHLTVDALQLTRSPLITTRVVRVTRQLFKSMSLRMLRNGTTFGDLLVYGRMLLHTKYFSHDGISSQHNETPSEVLDAALAVWSIYGPMVTGMRHA  581
                +V P   + K+T+ V +  + +     + L+TTR V V  +L + + L   R G TF DL    R++L+ + F+   I + +  +PS  LD A AV    G +++G++ A
Subject   9098  LVNPQARMVKITLPVFNPDIISNLTHNNNLLTTRTVEVPDRLLRQLRLTHAREGKTFTDLCATARVMLNGEQFTEFNIRNTYKTSPSVALDTAYAVVIYDGKLISGLKSA  9427

Range 2: 10379 to 10498 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.1 bits(68) 0.0 13/40(32%) 0/40(0%) Plus/Plus
Query     1101  DIRDFNVLIITTGSKGDVAPIIQLADWLSTIASGVAVLCP  1220
                +++   +LI   GSKGD+ PI  + + L+   +   +LCP
Subject  10379  NLKGTRILITALGSKGDLRPISAMLNILNAWEANTYILCP  10498

Ceratobasidium endornavirus B isolate Murdoch 2 polyprotein and ORF2 genes, complete cds

Sequence ID: NC_031463.1 Length: 23635 Number of Matches: 2

Range 1: 9098 to 9427 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.4 bits(132) 0.0 33/110(30%) 0/110(0%) Plus/Plus
Query      252  VVTPLDPVSKVTIRVPHLTVDALQLTRSPLITTRVVRVTRQLFKSMSLRMLRNGTTFGDLLVYGRMLLHTKYFSHDGISSQHNETPSEVLDAALAVWSIYGPMVTGMRHA  581
                +V P   + K+T+ V +  + +     + L+TTR V V  +L + + L   R G TF DL    R++L+ + F+   I + +  +PS  LD A AV    G +++G++ A
Subject   9098  LVNPQARMVKITLPVFNPDIISNLTHNNNLLTTRTVEVPDRLLRQLRLTHAREGKTFTDLCATARVMLNGEQFTEFNIRNTYKTSPSVALDTAYAVVIYDGKLISGLKSA  9427

Range 2: 10379 to 10498 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.1 bits(68) 0.0 13/40(32%) 0/40(0%) Plus/Plus
Query     1101  DIRDFNVLIITTGSKGDVAPIIQLADWLSTIASGVAVLCP  1220
                +++   +LI   GSKGD+ PI  + + L+   +   +LCP
Subject  10379  NLKGTRILITALGSKGDLRPISAMLNILNAWEANTYILCP  10498

Agaricus bisporus endornavirus 1 isolate AbEV1 2990, partial sequence

Sequence ID: KY357509.1 Length: 12730 Number of Matches: 2

Range 1: 6721 to 7014 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.8 bits(133) 0.0 31/98(32%) 0/98(0%) Plus/Plus
Query      342  ITTRVVRVTRQLFKSMSLRMLRNGTTFGDLLVYGRMLLHTKYFSHDGISSQHNETPSEVLDAALAVWSIYGPMVTGMRHAQNLLQTSDDKESTIMQLI  635
                +T++ + V+R+LF+   LR+LR       LL + R   H  Y+S  G   Q+ ETP   +D  LAV+  Y    T +      LQ    K+  I +L+
Subject   6721  VTSQEITVSRKLFRDCGLRLLRENHDIDSLLKHVRTKQHATYYSDSGSYRQYKETPGAAMDLCLAVYLRYNNKFTELFDTIKWLQPETVKQEGIFELL  7014

Range 2: 7708 to 7800 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.2 bits(77) 0.0 14/31(45%) 0/31(0%) Plus/Plus
Query     1422  DLVLGTAITPQASTIAEYFDAR*VQVNMMPW  1514
                DLV+GT +T Q   IA+ F+A  +++N +PW
Subject   7708  DLVVGTCLTVQGPIIAKKFNANYLELNALPW  7800

Ceratobasidium endornavirus C isolate Murdoch 3 polyprotein and ORF2 genes, complete cds

Sequence ID: KX355164.1 Length: 21004 Number of Matches: 2

Range 1: 7667 to 7867 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.3 bits(123) 0.0 24/67(36%) 0/67(0%) Plus/Plus
Query      342  ITTRVVRVTRQLFKSMSLRMLRNGTTFGDLLVYGRMLLHTKYFSHDGISSQHNETPSEVLDAALAVW  542
                +T R + +  ++++S++LR LR GT+F DLL+  R +LH   +S  G + +H    S ++D AL V+
Subject   7667  VTKRKLTIDNRIYRSLNLRALREGTSFEDLLMAARTMLHGVIYSPGGTAWKHQSDSSILMDTALVVF  7867

Range 2: 8801 to 8980 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
43.7 bits(89) 0.0 17/60(28%) 0/60(0%) Plus/Plus
Query     1080  RIHRVGVDIRDFNVLIITTGSKGDVAPIIQLADWLSTIASGVAVLCPSHLVPTTKSFSRI  1259
                ++    +++   N++I   GS+GD+ P   LA  LS   + V+ +CPS+    T S + +
Subject   8801  KVRTASINLNTSNIVIFAIGSRGDIRPAHNLAKQLSLDGASVSFVCPSNSCEQTGSINYV  8980

Ceratobasidium endornavirus C isolate Murdoch 3 polyprotein and ORF2 genes, complete cds

Sequence ID: NC_031461.1 Length: 21004 Number of Matches: 2

Range 1: 7667 to 7867 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.3 bits(123) 0.0 24/67(36%) 0/67(0%) Plus/Plus
Query      342  ITTRVVRVTRQLFKSMSLRMLRNGTTFGDLLVYGRMLLHTKYFSHDGISSQHNETPSEVLDAALAVW  542
                +T R + +  ++++S++LR LR GT+F DLL+  R +LH   +S  G + +H    S ++D AL V+
Subject   7667  VTKRKLTIDNRIYRSLNLRALREGTSFEDLLMAARTMLHGVIYSPGGTAWKHQSDSSILMDTALVVF  7867

Range 2: 8801 to 8980 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
43.7 bits(89) 0.0 17/60(28%) 0/60(0%) Plus/Plus
Query     1080  RIHRVGVDIRDFNVLIITTGSKGDVAPIIQLADWLSTIASGVAVLCPSHLVPTTKSFSRI  1259
                ++    +++   N++I   GS+GD+ P   LA  LS   + V+ +CPS+    T S + +
Subject   8801  KVRTASINLNTSNIVIFAIGSRGDIRPAHNLAKQLSLDGASVSFVCPSNSCEQTGSINYV  8980

Nucleotide Sequence (332 letters)

Query ID:ds2016-57_12
Query definition:No definition line
Query length:638
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 2 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
34
68
102
136
170
204
238
272
306
332

Descriptions

Alignments

Shahe endorna like virus 1 strain SHWC0209c12790 hypothetical protein gene, complete cds

Sequence ID: KX883795.1 Length: 15783 Number of Matches: 1

Range 1: 10441 to 10611 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.4 bits(108) 0.0 20/57(35%) 0/57(0%) Minus/Plus
Query        9  DHHETMQRCHTVFHHGGAGTTQEAHRQGCFSVITPVAYDQGFWDALTTSKRLGSAIE  179
                D++  + RC  + HHGG+GTT +A      S+I P+  DQ +W       R+G  +E
Subject  10441  DYNLVLPRCKAIVHHGGSGTTHQAVSYDVPSLILPIFGDQFWWSKRVNDLRIGIGLE  10611

Shahe endorna like virus 1 strain SHWC0209c12790 hypothetical protein gene, complete cds

Sequence ID: NC_032798.1 Length: 15783 Number of Matches: 1

Range 1: 10441 to 10611 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.4 bits(108) 0.0 20/57(35%) 0/57(0%) Minus/Plus
Query        9  DHHETMQRCHTVFHHGGAGTTQEAHRQGCFSVITPVAYDQGFWDALTTSKRLGSAIE  179
                D++  + RC  + HHGG+GTT +A      S+I P+  DQ +W       R+G  +E
Subject  10441  DYNLVLPRCKAIVHHGGSGTTHQAVSYDVPSLILPIFGDQFWWSKRVNDLRIGIGLE  10611

Ceratobasidium endornavirus C isolate Murdoch 3 polyprotein and ORF2 genes, complete cds

Sequence ID: KX355164.1 Length: 21004 Number of Matches: 1

Range 1: 9695 to 9823 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.8 bits(122) 0.0 23/43(53%) 0/43(0%) Minus/Plus
Query       21  TVFHHGGAGTTQEAHRQGCFSVITPVAYDQGFWDALTTSKRLG  149
                TV+HHGGAGTTQE    G + VITPV++DQ +W    T   +G
Subject   9695  TVWHHGGAGTTQELAAAGVWQVITPVSFDQKYWANRITEAGVG  9823

Ceratobasidium endornavirus C isolate Murdoch 3 polyprotein and ORF2 genes, complete cds

Sequence ID: NC_031461.1 Length: 21004 Number of Matches: 1

Range 1: 9695 to 9823 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.8 bits(122) 0.0 23/43(53%) 0/43(0%) Minus/Plus
Query       21  TVFHHGGAGTTQEAHRQGCFSVITPVAYDQGFWDALTTSKRLG  149
                TV+HHGGAGTTQE    G + VITPV++DQ +W    T   +G
Subject   9695  TVWHHGGAGTTQELAAAGVWQVITPVSFDQKYWANRITEAGVG  9823

Saccharopolyspora erythraea NRRL2338 complete genome

Sequence ID: AM420293.1 Length: 8212805 Number of Matches: 1

Range 1: 7477032 to 7477157 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.6 bits(102) 0.0 22/42(52%) 0/42(0%) Minus/Plus
Query       51  HHETMQRCHTVFHHGGAGTTQEAHRQGCFSVITPVAYDQGFW  176
                H     R   V HHGGAGTT    R G  +VITPV  DQ FW
Subject7477032  HDWLFPRTAAVVHHGGAGTTGAGVRAGVPAVITPVIADQPFW  7477157