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Queries

Nucleotide Sequence (412 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 3 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
42
84
126
168
210
252
294
336
378
412

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
204.5 204.5 32% 2.59e-58 75% BAT62484

Alignments

RNA dependent RNA polymerase, partial [Red clover powdery mildew-associated totivirus 4]

Sequence ID: dbj|BAT62484.1| Length: 775 Number of Matches: 1

Range 1: 54 to 184 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
204.5 bits(519) 0.0 98/131(75%) 0/131(0%) Plus/Plus
Query       18  VCLG*RSDSEVVASVFGVAMLGVMLQGVEKSYFYAKIDQYIITRSKAMLAIFTRHFSGLYESVLWDTPLNTKALYRDRLPENQLSESMTESQIEAGGYPKITSGHQIHYTYSEVQKSTPRDKHSRVNDLAR  410
                V  G  SD EVV S+FGVAM G+MLQGV KSYFYA+IDQYIITRSKAMLA+FTRHFSGLY SV WDTPL+T ALYRDRLP+ + ++SMT  +IE+ GYPKITSGH IHYTYSEV KSTPRDK +RV +LAR
Subject     54  VSEGPSSDKEVVVSIFGVAMTGIMLQGVTKSYFYARIDQYIITRSKAMLALFTRHFSGLYGSVFWDTPLSTDALYRDRLPDEKPAKSMTPMEIESLGYPKITSGHHIHYTYSEVLKSTPRDKLNRVAELAR  184

Nucleotide Sequence (529 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 3 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
53
106
159
212
265
318
371
424
477
529

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
287.3 287.3 28% 2.121e-88 95% BAT62484

Alignments

RNA dependent RNA polymerase, partial [Red clover powdery mildew-associated totivirus 4]

Sequence ID: dbj|BAT62484.1| Length: 775 Number of Matches: 1

Range 1: 628 to 775 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
287.3 bits(734) 0.0 140/148(95%) 0/148(0%) Minus/Plus
Query       75  LCWGMSLQIITNLRLRYYARQAVVCKTPIEAFYVIKNTHRVAGGISEAHDADVEQLIKPGPAGRLEVEVPKLAGVHEYAIEVAKTLDMMKDVELLVDRVRMATLSAVTPKSRKMNIIPNPNIQASKHLKAIYKAFKGKVDVAGYGKAA  518
                L  GMSLQIITNLRLRYYARQAVVCKTPIEAFYVIKNTHRVAGGISEAHDADVEQLIKPGPAG+LEVEVPKL GVHEYA+EVAKTLDMMKDVELLV RVRMATLSAVTPKSRKM+IIPNPN+QASKHLKAIYKAFKGKVDVAGYGKAA
Subject    628  LARGMSLQIITNLRLRYYARQAVVCKTPIEAFYVIKNTHRVAGGISEAHDADVEQLIKPGPAGKLEVEVPKLIGVHEYAVEVAKTLDMMKDVELLVSRVRMATLSAVTPKSRKMHIIPNPNVQASKHLKAIYKAFKGKVDVAGYGKAA  775

Nucleotide Sequence (348 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 3 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
35
70
105
140
175
210
245
280
315
348

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
224.6 224.6 33% 6.576e-66 90% BAT62484

Alignments

RNA dependent RNA polymerase, partial [Red clover powdery mildew-associated totivirus 4]

Sequence ID: dbj|BAT62484.1| Length: 775 Number of Matches: 1

Range 1: 380 to 495 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
224.6 bits(571) 0.0 104/116(90%) 0/116(0%) Plus/Plus
Query        1  GKLRAIYGADTTSYILSNFAMYNCENVLPNRFPVGKAANDRNVVSRVRAVLKDRLPYCLDFEDFNSQHSPEAMKAVVLAYGDVFNKTLTEDQMRALQWTADPISNQINHQTHPTHS  348
                GKLRAIYG DTTSYIL+NFAMYNCENVLPNRFPVGKAANDRNVVSRVR VLKDRLPYCLDFEDFNSQHSPEAM+AVVLAYGDVFNKTLTEDQMRALQWTAD ISNQI H    T +
Subject    380  GKLRAIYGTDTTSYILANFAMYNCENVLPNRFPVGKAANDRNVVSRVRGVLKDRLPYCLDFEDFNSQHSPEAMRAVVLAYGDVFNKTLTEDQMRALQWTADSISNQIIHDNTGTKT  495