Queries
Nucleotide Sequence (401 letters)
Query ID: | ds2016-122_14 |
Query definition: | No definition line |
Query length: | 336 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
75.8 | 392.2 | 14% | 3.183e-12 | 63% | JX904130.1 |
Alignments
Uncultured marine virus clone SOG02701, complete genome
Sequence ID: JX904130.1 Length: 1326 Number of Matches: 6
Range 1: 287 to 439 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
75.8 bits(159) | 0.0 | 32/51(63%) | 0/51(0%) | Minus/Minus |
Query 142 SFCWYSHFLEGLSISSRWKFEAITGL*CP*TFWAARALH*RSQRVLTLAER 294 +F +FLEGLS+ +RWKFEAITGL*CP FWAA ALH*R ++V+ L R Subject 287 TFVSAGNFLEGLSVFNRWKFEAITGL*CPWMFWAASALH*RVEQVVHLGSR 439
Range 2: 318 to 419 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
71.2 bits(149) | 0.0 | 28/34(82%) | 0/34(0%) | Plus/Plus |
Query 173 RQCSARAAQNV*GHHRPVIASNFHRLEIDSPSKK 274 RQC+A AAQN+ GHHRPVIASNFHRL DSPSKK Subject 318 RQCNADAAQNIQGHHRPVIASNFHRLNTDSPSKK 419
Range 3: 307 to 420 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
63.8 bits(133) | 0.0 | 28/38(74%) | 0/38(0%) | Minus/Minus |
Query 162 TS*RDYRFQVDGSLRQ*QVCDALRRSGPHARYTDGANE 275 TS*RDYR GSLRQ*QVCDAL SGPH RYTD N+ Subject 307 TS*RDYRCSTGGSLRQ*QVCDALGCSGPHPRYTDELNK 420
Range 4: 307 to 420 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
61.1 bits(127) | 0.0 | 29/38(76%) | 0/38(0%) | Plus/Plus |
Query 162 LVGSVSVARVRPRTSKGITDLLLPQTSIDLKSIVPLRS 275 LV VSV R+RPRTSKGITDLLLPQTS IVPLRS Subject 307 LVQLVSVTRMRPRTSKGITDLLLPQTSTG*TPIVPLRS 420
Nucleotide Sequence (413 letters)
Query ID: | ds2016-122_14 |
Query definition: | No definition line |
Query length: | 336 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
147.2 | 380.3 | 15% | 1.001e-33 | 43% | EU728305.1 | |
140.8 | 316.0 | 22% | 1.029e-33 | 42% | EU727983.1 | |
140.8 | 315.5 | 22% | 1.033e-33 | 42% | EU727925.1 | |
140.4 | 259.0 | 20% | 1.367e-33 | 55% | GU939955.1 | |
146.3 | 459.1 | 20% | 1.889e-33 | 48% | GU071097.1 |
Alignments
Uncultured marine virus clone Q_E6 photosystem II protein D1 (psbA) gene, partial cds
Sequence ID: EU728305.1 Length: 631 Number of Matches: 6
Range 1: 46 to 309 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
147.2 bits(315) | 0.0 | 69/88(78%) | 0/88(0%) | Plus/Plus |
Query 73 GDSYGLIVLHFLLGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAKRTTQTHP 336 G Y L+V HFL+GV CYMGREWELS+RLGMRPWI VAYSAPVAAA+AVFL+YP GQGSFSDGMPLGISGTFN+M+VFQA+ THP Subject 46 GGPYQLVVFHFLIGVFCYMGREWELSYRLGMRPWICVAYSAPVAAASAVFLVYPFGQGSFSDGMPLGISGTFNYMLVFQAEHNILTHP 309
Range 2: 45 to 308 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
91.8 bits(194) | 0.0 | 58/88(66%) | 0/88(0%) | Minus/Minus |
Query 72 GCVWVVRLAWNTIMKLKVPEIPRGIPSEKLP*PIG*IKKXXXXXXXXXXXXXAIQGRIPRRKLSSHSRPI*QATPSKKCRTISP*ESP 335 GCV ++ AWNT + L VPEIPRGIPSEKLP*P G* + TA AAATGAEYAT IQGR+P SSHSRP+*Q TP +K +T S * P Subject 45 GCVKMLCSAWNTSI*LNVPEIPRGIPSEKLP*PKG*TRNTAEAAATGAEYATQIQGRMPSL*ESSHSRPM*QKTPMRKWKTTSW*GPP 308
Range 3: 209 to 292 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
39.1 bits(79) | 0.0 | 16/28(57%) | 0/28(0%) | Minus/Minus |
Query 236 CAWLGIQS*S*KYQRFLEAYRQKSFLDQ 319 CA LGIQ+ S* +QR+ EA+ ++FLDQ Subject 209 CAQLGIQAYS*MFQRYREAFHLRNFLDQ 292
Range 4: 43 to 147 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
35.9 bits(72) | 0.0 | 15/35(43%) | 0/35(0%) | Minus/Minus |
Query 70 PRAHTQTETKFPLTTHIASYTK*EV*NN*PIRVTL 174 PR H ++ KFPLTTH+A +V N +R T+ Subject 43 PRTHAKSVRKFPLTTHVAKDANEKVENYELVRTTI 147
Uncultured marine virus clone I_H6 photosystem II protein D1 (psbA) gene, partial cds
Sequence ID: EU727983.1 Length: 746 Number of Matches: 5
Range 1: 46 to 309 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
140.8 bits(301) | 0.0 | 69/88(78%) | 0/88(0%) | Plus/Plus |
Query 73 GDSYGLIVLHFLLGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAKRTTQTHP 336 G Y L+V HFLLGV YMGREWELS+RLGMRPWI VAYSAPVAAATAVFL+YP GQGSFSDGMPLGISGTFN+M+VFQA+ HP Subject 46 GGPYQLVVFHFLLGVFSYMGREWELSYRLGMRPWIFVAYSAPVAAATAVFLVYPFGQGSFSDGMPLGISGTFNYMLVFQAEHNILMHP 309
Range 2: 543 to 599 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
27.2 bits(53) | 0.0 | 11/19(58%) | 0/19(0%) | Plus/Plus |
Query 347 PRSEERRVGKECRPRRSPH 403 PRS RR CRPRR H Subject 543 PRSMARRWNLVCRPRRQHH 599
Range 3: 195 to 308 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.7 bits(100) | 0.0 | 21/38(55%) | 0/38(0%) | Minus/Minus |
Query 222 GCVWVVRLAWNTIMKLKVPEIPRGIPSEKLP*PIG*IK 335 GC+ ++ AW T M L VP +P GIPSEK P*P G* + Subject 195 GCIRILCSAWKTSM*LNVPLMPSGIPSEKEP*PNG*TR 308
Range 4: 60 to 149 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
46.4 bits(95) | 0.0 | 20/30(67%) | 0/30(0%) | Minus/Minus |
Query 87 IQGRIPRRKLSSHSRPI*QATPSKKCRTIS 176 IQG IP R LSSHSRP+*+ TPS+K +T S Subject 60 IQGLIPNR*LSSHSRPM*EKTPSRKWKTTS 149
Range 5: 64 to 282 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.8 bits(109) | 0.0 | 31/73(42%) | 0/73(0%) | Minus/Minus |
Query 91 LEYNHEVESTRDS*RHTVRKASLTNWVDQEXXXXXXXXXXXXXXNPRAHTQTETKFPLTTHIASYTK*EV*NN 309 LE H VE T D+ RHTVR+ +LT V+++ +RS I N +P H + TKFPL++H+ K EV N+ Subject 64 LENQHVVERTADAERHTVRERTLTKRVNEKYRRRCGDRSRISNKDPGPHP*SITKFPLSSHVRKDAKQEVEND 282
Uncultured marine virus clone I_A11 photosystem II protein D1 (psbA) gene, partial cds
Sequence ID: EU727925.1 Length: 747 Number of Matches: 5
Range 1: 46 to 309 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
140.8 bits(301) | 0.0 | 69/88(78%) | 0/88(0%) | Plus/Plus |
Query 73 GDSYGLIVLHFLLGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAKRTTQTHP 336 G Y L+V HFLLGV YMGREWELS+RLGMRPWI VAYSAPVAAATAVFL+YP GQGSFSDGMPLGISGTFN+M+VFQA+ HP Subject 46 GGPYQLVVFHFLLGVFSYMGREWELSYRLGMRPWIFVAYSAPVAAATAVFLVYPFGQGSFSDGMPLGISGTFNYMLVFQAEHNILMHP 309
Range 2: 543 to 599 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
27.2 bits(53) | 0.0 | 11/19(58%) | 0/19(0%) | Plus/Plus |
Query 347 PRSEERRVGKECRPRRSPH 403 PRS RR CRPRR H Subject 543 PRSMARRWNLVCRPRRQHH 599
Range 3: 195 to 308 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.7 bits(100) | 0.0 | 21/38(55%) | 0/38(0%) | Minus/Minus |
Query 222 GCVWVVRLAWNTIMKLKVPEIPRGIPSEKLP*PIG*IK 335 GC+ ++ AW T M L VP +P GIPSEK P*P G* + Subject 195 GCIRILCSAWKTSM*LNVPLMPSGIPSEKEP*PNG*TR 308
Range 4: 60 to 149 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
46.0 bits(94) | 0.0 | 20/30(67%) | 0/30(0%) | Minus/Minus |
Query 87 IQGRIPRRKLSSHSRPI*QATPSKKCRTIS 176 IQG IP R LSSHSRP+*+ TPS+K +T S Subject 60 IQGLIPSR*LSSHSRPM*EKTPSRKWKTTS 149
Range 5: 64 to 282 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.8 bits(109) | 0.0 | 31/73(42%) | 0/73(0%) | Minus/Minus |
Query 91 LEYNHEVESTRDS*RHTVRKASLTNWVDQEXXXXXXXXXXXXXXNPRAHTQTETKFPLTTHIASYTK*EV*NN 309 LE H VE T D+ RHTVR+ +LT V+++ +RS I N +P H + TKFPL++H+ K EV N+ Subject 64 LENQHVVERTADAERHTVRERTLTKRVNEKYRRRCGDRSRISNKDPGPHP*SITKFPLSSHVRKDAKQEVEND 282
UNVERIFIED: Uncultured marine virus clone N302P_30 photosystem II protein D1 like (psbA) gene, partial sequence
Sequence ID: GU939955.1 Length: 723 Number of Matches: 4
Range 1: 34 to 297 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
140.4 bits(300) | 0.0 | 68/88(77%) | 0/88(0%) | Plus/Plus |
Query 73 GDSYGLIVLHFLLGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAKRTTQTHP 336 G Y L+V HFL+GV YMGREWELS+RLGMRPWI VAYSAPVAAATAVFL+YP GQGSFSDGMPLGISGTFN+M+VFQA+ HP Subject 34 GGPYQLVVFHFLIGVFAYMGREWELSYRLGMRPWIFVAYSAPVAAATAVFLVYPFGQGSFSDGMPLGISGTFNYMLVFQAEHNILMHP 297
Range 2: 531 to 587 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
27.2 bits(53) | 0.0 | 11/19(58%) | 0/19(0%) | Plus/Plus |
Query 347 PRSEERRVGKECRPRRSPH 403 PRS RR CRPRR H Subject 531 PRSVARRWNLVCRPRRQHH 587
Synechococcus phage S SSM5, complete genome
Sequence ID: GU071097.1 Length: 176184 Number of Matches: 6
Range 1: 165040 to 165303 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
146.3 bits(313) | 0.0 | 69/88(78%) | 0/88(0%) | Plus/Plus |
Query 73 GDSYGLIVLHFLLGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAKRTTQTHP 336 G Y L+V HFL+GVACYMGREWELS+RLGMRPWI VAYSAPVAAA AVFL+YP GQGSFSDGMPLGISGTFN+M VFQA+ HP Subject 165040 GGPYQLVVFHFLIGVACYMGREWELSYRLGMRPWICVAYSAPVAAAAAVFLVYPFGQGSFSDGMPLGISGTFNYMFVFQAEHNILMHP 165303
Range 2: 165039 to 165302 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
100.5 bits(213) | 0.0 | 60/88(68%) | 0/88(0%) | Minus/Minus |
Query 72 GCVWVVRLAWNTIMKLKVPEIPRGIPSEKLP*PIG*IKKXXXXXXXXXXXXXAIQGRIPRRKLSSHSRPI*QATPSKKCRTISP*ESP 335 GC+ ++ AW T + LKVPEIPRGIPSEKLP*P G* +KTA AAATGA YAT IQGRIPRR SSHSRP+*QATP +K +T + * P Subject 165039 GCIRMLCSAWKTNI*LKVPEIPRGIPSEKLP*PKG*TRKTAAAAATGALYATQIQGRIPRR*DSSHSRPM*QATPMRKWKTTNW*GPP 165302
Range 3: 165037 to 165276 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.0 bits(166) | 0.0 | 43/80(54%) | 0/80(0%) | Minus/Minus |
Query 70 LEYNHEVESTRDS*RHTVRKASLTNWVDQEXXXXXXXXXXXXXXNPRAHTQTETKFPLTTHIASYTK*EV*NN*PIRVTL 309 LE H V+STRD+ RHT+R+ LT +DQEN SS +R IC +NPR HT+ +FPLTTH+ASYT EV +N +R T+ Subject 165037 LEDEHIVKSTRDTKRHTIRETPLTERIDQENCGSSSDRCAICYANPRTHTEAVRQFPLTTHVASYTDEEVEDNQLVRTTV 165276
Range 4: 165032 to 165277 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
67.5 bits(141) | 0.0 | 39/82(48%) | 0/82(0%) | Minus/Minus |
Query 65 LGIQS*S*KYQRFLEAYRQKSFLDQLGRSRKXXXXXXXXXXXXXQSKGAYPDGN*VPTHDPYSKLHQVRSVEQLAHKSHPST 310 LG ++ S*KYQR+ EAY Q++ LD+ R K + Q +Q M ++SK AY G VPTHDP SKLH+ S Q K H T Subject 165032 LGRRTYS*KYQRYQEAYHQRNSLDRKDRPGKLRQQQRQVRYMLRKSKDAYRGGKTVPTHDPCSKLHR*GSGRQPTGKDHRCT 165277