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Queries

Nucleotide Sequence (945 letters)

Query ID:ds2016-55_22
Query definition:No definition line
Query length:575
Program:TBLASTX 2.2.29+
Database:/save/stheil/db/refseq_vir/viral.genomic.fna

Graphic Summary

Distribution of 6 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
95
190
285
380
475
570
665
760
855
945

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
296.6 1175.1 22% 2.295e-79 34% NC_003604
104.6 381.5 19% 9.67e-27 29% NC_018458
79.9 79.9 8% 4.031e-14 38% NC_016404
71.6 118.5 15% 5.666e-20 30% NC_003602
61.6 61.6 8% 1.327e-08 38% NC_011106

Alignments

Grapevine virus A, complete genome

Sequence ID: Length: 7351 Number of Matches: 11

Range 1: 5582 to 6139 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
296.6 bits(641) 0.0 127/186(68%) 0/186(0%) Minus/Plus
Query        1  *V*TCTLIIRKCALE*STLQVTLSMSIGDSQVSKGSSRALHEIKVFNVKRNTKDLEALNKALHRGDAYETELNERVFPRRTKKCVIHKELVVQDGRVDCDLDIMDTGLDEVDEEEFPLYHVGCIVVALMPHGKNLSGKVVMELRDTRLKGPSSRISRSFMDMSKPISACADFPGYFISTPDQLNRY  558
                *V*T TLI R+ + +    +V  +MS   S  +K SS    +IKVF+VKR+T+DLE LNK+LHRGD Y TEL E+VFPRRTKKCVIHK+++V+DGRVDCDLDIMD GLD+++EEEFPLYHVGCIVVALMPHGKNL GKV +E+ DTRL   +SRISR+ MDMSKP+SACADFPGYFIST D LN Y
Subject   5582  *V*TFTLITRRLSRDQCKRKVITAMSQEGSLGTKASSFEPQDIKVFHVKRSTRDLETLNKSLHRGDVYNTELIEKVFPRRTKKCVIHKDVIVKDGRVDCDLDIMDEGLDDINEEEFPLYHVGCIVVALMPHGKNLQGKVSVEVLDTRLVDGASRISRTLMDMSKPLSACADFPGYFISTSDLLNGY  6139

Range 2: 5197 to 5844 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
232.9 bits(502) 0.0 116/216(54%) 0/216(0%) Minus/Plus
Query      296  TELVEFLRLGLDRSTLGNGSIESLPFDRCIRLLEGLRSLGYASIDNVLHVLGGGEPDRFEILKVFRAQGVAISEAYQLGLTKSLSFSPRPVSLIXXXXXDRIARCASFLPVDLGAVIGELVINFERSRLSVDLYINNKKVCSRIKYSAGDAQYVHRRFSGFKGIITRSS*DKGL*CEEEYQGFRGSEQSSASRGCV*DRVE*TGISKEDQEVRDTQ  943
                T L EFL  G D    G+GS+ SL + +C+ LL  L+SLGY SID++L++LGGGE +RFEI ++FR  G+ I EA QLG+ KSL  SPR +  ILDDLL R+ R ++FLP DLGAV GELV  F  SRLSVDLY+NNKKV +R   + GD  YV RRFSG+KG+I R++   GL  ++E+Q  R S+Q  AS   V* R    G SKE++EVR  Q
Subject   5197  TGLSEFLGHGSDSCDSGSGSLGSLSYVQCVNLLSDLKSLGYQSIDSILYILGGGEAERFEIYRIFRRHGIGIGEALQLGVKKSLCNSPRSLLAILDDLLSRLGRGSAFLPSDLGAVKGELVATFHSSRLSVDLYVNNKKVVTRSVQAEGDYSYVARRFSGYKGLILRATRY*GLSRQKEHQRPRNSQQEPASG*RV*HRAHREGFSKENEEVRHPQ  5844

Range 3: 6042 to 6125 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.2 bits(77) 0.0 18/28(64%) 0/28(0%) Minus/Plus
Query       15  GYQGVSWICPNL*VHVLTSLGTS*APRI  98
                GY G SWIC + *  VLTS GTS AP I
Subject   6042  GYLGPSWICQSH*APVLTSRGTSLAPVI  6125

Range 4: 5926 to 5982 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.0 bits(70) 0.0 11/19(58%) 0/19(0%) Minus/Plus
Query      158  VPIIPCRLHRRGTDAPW*E  214
                +P +PCR+H  G DA W*E
Subject   5926  IPTLPCRVHSGGADATW*E  5982

Range 5: 5196 to 5843 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.0 bits(308) 0.0 95/216(44%) 0/216(0%) Plus/Minus
Query      297  CVSRTSWSSLEIPVHSTRSHTHPRDAELCSEPLNPWYSSSH*RPLSHEERVMIPLKPENLRWTY*ASPAEYFILEHTFLLLMYKSTLNLERSKLITSSPITAPKSTGRNDAHLAIRSSKSSSIRLTGRGLKLRLFVKPSW*ASLIATPCARNTLRISKRSGSPPPSTWSTLSIEA*PKERNPSSNLIHLSKGRDSIDPLPNVDLSKPRRRNSTNSV  944
                C  RTS  SLE P      +T   DA  C E    W S    RP     R M PL PENL  T   SP+       TFLLL  +STLNL+   + TSSP+TAP+S GR    L    +KSSSI     GL  +LF+ PS  AS I  PC R    IS RS SPPP  +S LSI   PK       L H +  +D  DPLP   LS P  RNS N V
Subject   5196  CG*RTSSFSLEKPSL*ALCYTRHPDAGSC*EFRGLWCSF*RERP*YLVARRMRPLYPENLLAT*L*SPSACTDRVTTFLLLT*RSTLNLDEWNVATSSPLTAPRSLGRKALPLPSLDNKSSSIASRLLGLLHKLFLTPSCKASPIPIPCLRKIR*ISNRSASPPPKIYSMLSILWYPKLFRSLKRLTHCT*DKDPRDPLPESQLSLPCPRNSLNPV  5843

Range 6: 6043 to 6138 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.1 bits(103) 0.0 23/32(72%) 0/32(0%) Plus/Minus
Query        2  YRLS*SGVLMKYPGKSAHALIGLDISMKLLDI  97
                Y  S S VLMKYPGKSA AL G DISM++LDI
Subject   6043  YPFSRSLVLMKYPGKSAQALNGFDISMRVLDI  6138

Range 7: 5926 to 5985 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.8 bits(85) 0.0 16/20(80%) 0/20(0%) Plus/Minus
Query      155  RFLPWGISATTMQPTWYNGN  214
                RFLP GISATTM PTW +GN
Subject   5926  RFLPCGISATTMHPTW*SGN  5985

Range 8: 5582 to 6139 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.0 bits(273) 0.0 70/186(38%) 0/186(0%) Plus/Minus
Query        1  VPIELIRGAYEVPREVSTCTYRFGHIHETP*YP*ARSLESCIPELHYHLTTEILTMGHQCHDDATDMV*WELLLIHLIQPCIHDIKVTIDPTILYHQLLVYHALLGPPWKYPFIQLGLIRIPAMQSFVQSL*ILGIPLHIKDLYLMKSA**SL*NLRISDGHTERHLQSTLF*STLSYY*CTSLHL  558
                V ++ I GA EVPREVST      HIHE P YP*    +  +     HL  ++LTM HQ H  A  MV WE L I+++   IHD+++ +   +L   + V  ALL  PWK    +L +I +  MQ+ V+S  + G P  +KDL ++    * L   R    H+  HL   L     S Y*   LHL
Subject   5582  VSVQQITGANEVPREVSTGAQWL*HIHEGPRYP*CPVYQPGV*NFDTHLALKVLTMWHQRHHYAPYMVEWEFLFIYVV*ALIHDVQIAVHAAVLNDDVFVDDALLRSPWKNLLYELCVIHVTPMQALVESFEVSGAPFDVKDLNILWLEG*GLCTQRTFLRHSCNHLPLALIA*QPSCY*RKGLHL  6139

Range 9: 5329 to 5832 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.9 bits(240) 0.0 69/168(41%) 0/168(0%) Plus/Minus
Query      308  HFLVLLGNTRSFNSVSYASPRCRALFRASKSLVFLFTLKTFIS*RARDDPFET*ESPMDILSVTCRVLYSRAHFLIINVQVYT*PRTLEIDY*LPDHSTQINRQK*CASCYTI*QVVQYQTNWTRAEAKAFC*A*LVSLANCHTLCPEHLENLEAVRLTSSQHVEHVI  811
                HF VLLG T S +SV Y SPRCR L R S+SLV L T KT IS  ++D+ F   E   DI  +T R+  SR + L+INV+VYT*   +E  Y L     QI  ++  AS  +  QV+ Y    +   A+    A*L SL++  ++ PE   +LE+ RL ++Q++ + I
Subject   5329  HFFVLLGKTFSMSSVLYTSPRCRLLLRVSRSLVLLLT*KTLISCGSKDEAFVPREPSCDIAVITFRLH*SRDNLLVINVKVYT*SGRVERCYQLTFDCPQITWKESAASPKSRQQVI*YCQ*TSWTVAQTLFDA*L*SLSDPDSVPPEDSIDLESFRLATTQNI*YAI  5832

Range 10: 5640 to 5981 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.7 bits(124) 0.0 39/114(34%) 0/114(0%) Minus/Plus
Query      159  R*RSVCPSEILRFQRDHHALFMR*RSLM*RGIPRI*RL*TKLCIAGMRMRPS*MNGYFQGGPRSA*YTRSWWYRMVGSIVTLISWIQGWMRWMRRSSHYTMSVASSWH*CPMVR  500
                R*  +C  ++L  QR H +     RS   +G P   +L T+ CI    +  S    +FQG  RSA  T++   R         SW++     M+R+SH TM  A  W *C MVR
Subject   5640  R*LQLCRKKVLWVQRPHPSSHKILRSFTSKGAPETSKLSTRACIGVTCITQSS*RRFFQGERRSASSTKTSSLRTAAWTAIWTSWMRA*TT*MKRNSHSTM*GA*WWR*CHMVR  5981

Range 11: 6037 to 6138 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.9 bits(72) 0.0 15/34(44%) 0/34(0%) Minus/Plus
Query        2  LTDIKEFHGYVQTYKCMC*LPWVLHKHPGSTQSV  103
                + DI + HGYV+  + +C*LP VLH H  S + +
Subject   6037  IKDI*DPHGYVKAIERLC*LPGVLH*HQ*SAERI  6138

Grapevine virus F, complete genome

Sequence ID: Length: 7551 Number of Matches: 8

Range 1: 5759 to 6016 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
93.2 bits(197) 0.0 38/86(44%) 0/86(0%) Minus/Plus
Query      214  SQVSKGSSRALHEIKVFNVKRNTKDLEALNKALHRGDAYETELNERVFPRRTKKCVIHKELVVQDGRVDCDLDIMDTGLDEVDEEE  471
                S +   SS    E+K+F VK+     E LNKA+ R D Y+ EL ER+ P+RT+KCV+HKE+ V + RV+ +++IMD G+    +EE
Subject   5759  SVLMASSSDNSREVKIFEVKKGATGFEELNKAISRSDVYDNELIERIMPKRTRKCVVHKEISVVNSRVNVEMEIMDDGVVGKLDEE  6016

Range 2: 6028 to 6210 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
33.1 bits(66) 0.0 21/61(34%) 0/61(0%) Minus/Plus
Query       23  IPCRLHRRGTDAPW*ESQW*GGNGAQGYKTQGTELTDIKEFHGYVQTYKCMC*LPWVLHKH  205
                +P R+   GTDAP  E   *G    QG   QG +  D +   G  + +KC C +  + H H
Subject   6028  LPRRMLGGGTDAPRQER*G*GRASLQGP*AQGGKGRDWEYGCGSQERHKCTCRVSRLFHIH  6210

Range 3: 5518 to 5700 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
32.7 bits(65) 0.0 21/61(34%) 0/61(0%) Minus/Plus
Query      530  LGLTKSLSFSPRPVSLIXXXXXDRIARCASFLPVDLGAVIGELVINFERSRLSVDLYINNK  712
                LG+T  L  + R    I+D L+  +      LP+DL  +   +V++ E  RLSV   +NNK
Subject   5518  LGVTNFLETTDRSEEEIVDCLVKSLTNDRPRLPIDLHKLGRPIVVSKEGGRLSVTFRVNNK  5700

Range 4: 5987 to 6217 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
104.6 bits(222) 0.0 41/77(53%) 0/77(0%) Minus/Plus
Query       16  DTGLDEVDEEEFPLYHVGCIVVALMPHGKNLSGKVVMELRDTRLKGPSSRISRSFMDMSKPISACADFPGYFISTPD  246
                D  + ++DEE +P+YH GC+VVALMPHG+N+ GKV +  +D RLK     I     D+ K ISA A+FPGYFIST D
Subject   5987  DGVVGKLDEEAYPIYHAGCLVVALMPHGRNVKGKVALRFKDRRLKAGKDVIGSMVADLKKGISAHAEFPGYFISTAD  6217

Range 5: 6031 to 6075 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.3 bits(73) 0.0 12/15(80%) 0/15(0%) Plus/Minus
Query      158  FLPWGISATTMQPTW  202
                FLPWGISATT  P W
Subject   6031  FLPWGISATTKHPAW  6075

Range 6: 5798 to 5986 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
33.6 bits(67) 0.0 18/63(29%) 0/63(0%) Plus/Minus
Query      244  IHDIKVTIDPTILYHQLLVYHALLGPPWKYPFIQLGLIRIPAMQSFVQSL*ILGIPLHIKDLY  432
                +H + + I+P +     LV+H        YP  +L +I I +   F+Q L   G  LH +D +
Subject   5798  VHYLHLHINP*VNNRDFLVHHTFACALRHYPLNELIVIHIASGDRFIQLLEPCGSFLHFEDFH  5986

Range 7: 5520 to 5699 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.8 bits(50) 0.0 21/60(35%) 0/60(0%) Plus/Minus
Query      531  LLLMYKSTLNLERSKLITSSPITAPKSTGRNDAHLAIRSSKSSSIRLTGRGLKLRLFVKP  710
                LLL  K TLNL  S L T       KS G          +K S+I  +   +  R FV P
Subject   5520  LLLTLKVTLNLPPSLLTTIGLPNLCKSMGSLGLSFVNDLTKQSTISSSLLSVVSRKFVTP  5699

Range 8: 6164 to 6232 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
22.1 bits(42) 0.0 8/23(35%) 0/23(0%) Plus/Minus
Query        1  VPIELIRGAYEVPREVSTCTYRF  69
                VP   +   YE+  ++  CTY F
Subject   6164  VPSLQVGSGYEITWKLCMCTYAF  6232

Actinidia virus B, complete genome

Sequence ID: Length: 7488 Number of Matches: 1

Range 1: 5965 to 6201 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.9 bits(168) 0.0 30/79(38%) 0/79(0%) Minus/Plus
Query        1  LDEVDEEEFPLYHVGCIVVALMPHGKNLSGKVVMELRDTRLKGPSSRISRSFMDMSKPISACADFPGYFISTPDQLNRY  237
                +D ++EE+ P  H+GC+ +A++PHG+ + G V +++ D R K     +     D+   +SA A FPGYF+ST D  N Y
Subject   5965  IDGLNEEKQPYLHLGCVAIAVIPHGRAMKGTVQIKVEDQRFKEGHGTVCSFKCDLKDALSAYASFPGYFVSTTDVKNGY  6201

Grapevine virus B, complete genome

Sequence ID: Length: 7599 Number of Matches: 2

Range 1: 5868 to 6098 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.6 bits(150) 0.0 26/77(34%) 0/77(0%) Minus/Plus
Query        1  EVDEEEFPLYHVGCIVVALMPHGKNLSGKVVMELRDTRLKGPSSRISRSFMDMSKPISACADFPGYFISTPDQLNRY  231
                +++   +P  H+GC+ + ++PHG++L G+V   LRDTR    S+ +        + +SA + FPGYF+ST D ++ +
Subject   5868  KIETTSYPYLHLGCVAICVIPHGRDLKGEVEFTLRDTRFLPRSNPLMSFGCKAERMLSAFSAFPGYFVSTYDLIDGF  6098

Range 2: 5661 to 5852 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.9 bits(96) 0.0 19/64(30%) 0/64(0%) Minus/Plus
Query      244  EIKVFNVKRNTKDLEALNKALHRGDAYETELNERVFPRRTKKCVIHKELVVQDGRVDCDLDIMD  435
                ++ VF   +    ++ +  A+ +   Y+    ER+FP R  K V+H+E+ V+DG V   +++MD
Subject   5661  QLSVFPKPKEELGVKGVKSAIAKTKVYDLSYFERLFPTRVFKSVVHEEIRVRDGEVKQVINLMD  5852

Grapevine virus E, complete genome

Sequence ID: Length: 7564 Number of Matches: 1

Range 1: 5988 to 6206 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.6 bits(128) 0.0 28/73(38%) 0/73(0%) Minus/Plus
Query       16  DEVDEEEFPLYHVGCIVVALMPHGKNLSGKVVMELRDTRLKGPSSRISRSFMDMSKPISACADFPGYFISTPD  234
                D +D+E  P  HVGCIVV  M   ++  G   + ++D RLKG    I       S  ++A ADFP Y I+  D
Subject   5988  DGLDKEATPFMHVGCIVVGFMSLARSAVGTYKVIIQDDRLKGEHKNICAFTFQTSDKVAAFADFPDYCIAVED  6206

Nucleotide Sequence (601 letters)

Query ID:ds2016-55_22
Query definition:No definition line
Query length:575
Program:TBLASTX 2.2.29+
Database:/save/stheil/db/refseq_vir/viral.genomic.fna

Graphic Summary

Distribution of 6 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
61
122
183
244
305
366
427
488
549
601

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
173.0 655.8 19% 3.849e-79 30% NC_003604
120.2 197.7 29% 8.809e-44 39% NC_016404
118.4 197.3 29% 1.204e-43 43% NC_003602
89.8 307.8 36% 1.135e-41 33% NC_018458
48.4 80.9 13% 4.012e-09 35% NC_011106

Alignments

Grapevine virus A, complete genome

Sequence ID: Length: 7351 Number of Matches: 7

Range 1: 3807 to 4070 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
173.0 bits(374) 0.0 72/88(82%) 0/88(0%) Plus/Plus
Query      334  PMKTHLALSEKLNELAPFDLKAKEDREQYTDAGRTEQIDEEGYGQWGANPMSHKALYLRHTSDDTATFMMSVKKRLRYRNYEGNRRKY  597
                P KTHLALS K+NELAPFDLKAKE REQ+T+AGRTEQIDE GY     +PM+HKALYLRHTSDDTATFMMSVKKRLR+RNYE NRRKY
Subject   3807  PTKTHLALSTKMNELAPFDLKAKEHREQHTEAGRTEQIDENGYQGEVGDPMTHKALYLRHTSDDTATFMMSVKKRLRFRNYEANRRKY  4070

Range 2: 3474 to 3740 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
143.0 bits(308) 0.0 59/89(66%) 0/89(0%) Plus/Plus
Query        1  EDEDVMVAFTRSRGEIAINVDKKLKEVLLRTSKSELLRKILNGETFRRSNIITLVKKHIPEAVIIFEENRLASNVDYEERLAGDPYLKS  267
                EDEDVMVA TRSRGEI I+V   LK+ L+  +KS LL+K+L GET+RRS I+ +V+KHIPE  ++FEE+RLA  VDYE RLAGDPYLKS
Subject   3474  EDEDVMVALTRSRGEIGIHVTPALKKKLITNAKSTLLKKVLKGETYRRSEIVAMVRKHIPETTVLFEESRLAETVDYEARLAGDPYLKS  3740

Range 3: 3815 to 4021 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
94.1 bits(199) 0.0 47/69(68%) 0/69(0%) Minus/Minus
Query      342  TDIMKVAVSSEVCLRYSALWLIGLAPHXXXXXXXXXSVRPASVYCSRSSLAFKSNGANSLSFSLRARWV  548
                TDIMKVAVSS+VCLRY+ALW++G       P SSICSVRPASV CSR S A +SNGA+S  F LRA+WV
Subject   3815  TDIMKVAVSSDVCLRYNALWVMGSPTSPWYPFSSICSVRPASVCCSRCSFALRSNGASSFIFVLRAKWV  4021

Range 4: 3476 to 3754 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.0 bits(190) 0.0 48/93(52%) 0/93(0%) Minus/Minus
Query        3  YKDNSDFR*GSPANLSS*STLLARRFSSNMITASGMCFFTSVIMFDLLNVSPFRIFRKSSLLDVLSNTSFNFLSTLIAISPLDLVKATITSSS  281
                Y+   D R*GSPA+L+S*ST+ A   SSN    SGMCF T   + DLL VSP   F  S LL ++ +  F    T + ISPL+ VKATITSSS
Subject   3476  YRARRDLR*GSPASLAS*STVSASLLSSNSTVVSGMCFRTIATISDLL*VSPLSTFFSSVLLALVISFFFRAGVTCMPISPLERVKATITSSS  3754

Range 5: 3798 to 4070 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.2 bits(149) 0.0 34/91(37%) 0/91(0%) Minus/Minus
Query      325  ILSPVPLIISVP*ALFNRHHESGCVVRSVPEV*CLMAHWVSAPLPIALLVNLLRTPGISVLLTILLGL*VEWGQLIKLLTEGQMGLHWLQC  597
                +L  V  I+S    LF+ HHE  C++R +P+V  L+ H V+    + +LV L   P + VLL +L    V+W +L+ L  +G MGL  L+C
Subject   3798  VLPSVGFIVSEAQPLFD*HHEGSCIIRCMPQVQRLVGHGVTHFSLVPILVYLFGPPCLCVLLPVLFCFEVKWCKLVHLCAQG*MGLGGLEC  4070

Range 6: 3887 to 4069 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
43.2 bits(88) 0.0 23/61(38%) 0/61(0%) Plus/Plus
Query      414  AVH*CRAYGAN*RGGLWAMGR*PNEP*GTIPQAHF*RHSHFHDVG*KAPKVQKL*GEQEKV  596
                A H  RA   + R  +     *P++P G +P+A+ * +S+ HDV  K   +QKL* +Q++V
Subject   3887  ATHRGRADRTDRREWVPGRSG*PHDPQGVVPEAYI**YSYLHDVSQKEVALQKL*SQQKEV  4069

Range 7: 3482 to 3730 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.4 bits(84) 0.0 25/83(30%) 0/83(0%) Plus/Plus
Query        9  GCDGSLH*IQGRDRNQCGQEIERGVTEDIQERAFTEDPERRDV*KIKHYHARKEAHSGGCNHIRGKPPGKQC*LRGEIGWRSL  257
                G DG L+ +Q R+R+ C    E        +    E  + R++ KI       +AH+   + + GK  G+   LRG  GWR L
Subject   3482  GRDGGLNPLQRRNRHTCNPCSEEETDHQC*KHTAEESTQGRNLQKIGDSGNGPKAHTRDHSAV*GKQTGRDGGLRG*AGWRPL  3730

Actinidia virus B, complete genome

Sequence ID: Length: 7488 Number of Matches: 2

Range 1: 3776 to 4039 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
120.2 bits(258) 0.0 52/88(59%) 0/88(0%) Plus/Plus
Query      334  PMKTHLALSEKLNELAPFDLKAKEDREQYTDAGRTEQIDEEGYGQWGANPMSHKALYLRHTSDDTATFMMSVKKRLRYRNYEGNRRKY  597
                P KTHL +S K NELAP  L+A+E RE  T AG TEQIDE GY     NPM+HKALYL H + D ATF +SVKKRLR+ + E N R++
Subject   3776  PQKTHLPISTKENELAPSLLRAREHREARTPAGTTEQIDEMGYKMEPENPMTHKALYLHHRNSDVATFFLSVKKRLRFMDREKNHRRF  4039

Range 2: 3446 to 3706 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
77.5 bits(164) 0.0 34/87(39%) 0/87(0%) Plus/Plus
Query        4  DEDVMVAFTRSRGEIAINVDKKLKEVLLRTSKSELLRKILNGETFRRSNIITLVKKHIPEAVIIFEENRLASNVDYEERLAGDPYLK  264
                D+ VMVA TR+R  +++ VDK +KE L   +KS +L+  L G+  +R  I+ ++     +  +I +E R A + D E++L+GDPYLK
Subject   3446  DKAVMVALTRARNTLSVEVDKSMKEHLKVHAKSSILKMFLRGQMIKRELIMEMMGTDNGDVELIEKETRFADSDDMEDKLSGDPYLK  3706

Grapevine virus B, complete genome

Sequence ID: Length: 7599 Number of Matches: 2

Range 1: 3754 to 4017 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.4 bits(254) 0.0 51/88(58%) 0/88(0%) Plus/Plus
Query      334  PMKTHLALSEKLNELAPFDLKAKEDREQYTDAGRTEQIDEEGYGQWGANPMSHKALYLRHTSDDTATFMMSVKKRLRYRNYEGNRRKY  597
                P KTHL L    NEL+  DL++KE RE  T+AGRT+QIDE GY     NPM+HKALYL H + D ATF +S++KRLR+R+ E NRRK+
Subject   3754  PQKTHLPLCVGENELSISDLRSKESREVSTEAGRTDQIDELGYKGEPENPMNHKALYLYHQNSDVATFFLSIRKRLRFRDPEKNRRKF  4017

Range 2: 3424 to 3684 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.9 bits(167) 0.0 37/87(43%) 0/87(0%) Plus/Plus
Query        4  DEDVMVAFTRSRGEIAINVDKKLKEVLLRTSKSELLRKILNGETFRRSNIITLVKKHIPEAVIIFEENRLASNVDYEERLAGDPYLK  264
                DE V+VAFTR+R EI I  D  L   L R++KS +L+KIL GE      I++L++K +P+ + +        + + EE+L+GDPYLK
Subject   3424  DETVIVAFTRARKEINIIGDASLVNNLKRSAKSTVLKKILGGERVTEGLILSLIRKKLPDVIWLRRRCCSGQSDEMEEKLSGDPYLK  3684

Grapevine virus F, complete genome

Sequence ID: Length: 7551 Number of Matches: 6

Range 1: 3937 to 4128 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
89.8 bits(191) 0.0 38/64(59%) 0/64(0%) Plus/Plus
Query      406  DREQYTDAGRTEQIDEEGYGQWGANPMSHKALYLRHTSDDTATFMMSVKKRLRYRNYEGNRRKY  597
                +REQ T AG T QIDE GY     NP +HKALYL H  D  ATFM+SV+KRLR+R+ E NR +Y
Subject   3937  NREQKTTAGLTAQIDEMGYAGQNENPCTHKALYLHHKMDXAATFMLSVRKRLRFRDPEKNRARY  4128

Range 2: 3502 to 3765 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.3 bits(179) 0.0 39/88(44%) 0/88(0%) Plus/Plus
Query        1  EDEDVMVAFTRSRGEIAINVDKKLKEVLLRTSKSELLRKILNGETFRRSNIITLVKKHIPEAVIIFEENRLASNVDYEERLAGDPYLK  264
                ED DV+VAFTR+RG           ++L   +KSE+LR IL      R  I+  ++K +P A  +F E RLA+  +YEE+L GDPYLK
Subject   3502  EDGDVIVAFTRARGTTKYMCSDSDMDMLKARAKSEVLRSILRAGKVGRDTILNSLRKEMPNAEPVFTEARLANTEEYEEKLMGDPYLK  3765

Range 3: 3835 to 3888 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.7 bits(70) 0.0 13/18(72%) 0/18(0%) Plus/Plus
Query      334  PMKTHLALSEKLNELAPF  387
                P+KTHL LSE +NE+APF
Subject   3835  PVKTHLFLSEGVNEMAPF  3888

Range 4: 3504 to 3764 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
44.1 bits(90) 0.0 29/87(33%) 0/87(0%) Minus/Minus
Query        3  FR*GSPANLSS*STLLARRFSSNMITASGMCFFTSVIMFDLLNVSPFRIFRKSSLLDVLSNTSFNFLSTLIAISPLDLVKATITSSS  263
                FR*GSP + SS S++ A   S N  +A G+ F     +  L  +    I R +SL  +  + S +    +  + P   V ATITS S
Subject   3504  FR*GSPISFSSYSSVFANLASVNTGSAFGISFLREFRIVSLPTLPALSIDRNTSLFALALSISISESEHMYFVVPRARVNATITSPS  3764

Range 5: 3937 to 4128 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.0 bits(57) 0.0 22/64(34%) 0/64(0%) Minus/Minus
Query      406  ILSPVPLIISVP*ALFNRHHESGCVVRSVPEV*CLMAHWVSAPLPIALLVNLLRTPGISVLLTI  597
                I  PV   +S   A  +R HE    +  V EV* LM  WV     +   VNL      S+LL +
Subject   3937  IPGPVLFGVSEAEAFSHR*HEGCRXIHFVMEV*SLMCAWVFILTCVTHFVNLSCKTSGSLLLPV  4128

Range 6: 3826 to 3876 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.8 bits(50) 0.0 10/17(59%) 0/17(0%) Minus/Minus
Query      325  LIKLLTEGQMGLHWLQC  375
                L+  LT  QM LHWL+C
Subject   3826  LVHPLT*EQMCLHWLRC  3876

Grapevine virus E, complete genome

Sequence ID: Length: 7564 Number of Matches: 2

Range 1: 3883 to 4038 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.4 bits(100) 0.0 18/52(35%) 0/52(0%) Plus/Plus
Query      430  GRTEQIDEEGYGQWGANPMSHKALYLRHTSDDTATFMMSVKKRLRYRNYEGN  585
                G + QI +    ++   P +  ++YL HT++D   F++S+KKRLR+ ++E N
Subject   3883  GFSTQIRDNIASEFHPGPSAPSSIYLHHTAEDDVLFILSIKKRLRFADFEKN  4038

Range 2: 3787 to 3870 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
32.5 bits(65) 0.0 13/28(46%) 0/28(0%) Plus/Plus
Query      337  MKTHLALSEKLNELAPFDLKAKEDREQY  420
                ++THL ++   NE   F LKAKE+RE +
Subject   3787  IRTHLGVTTFANEQFAFGLKAKEEREHH  3870

Nucleotide Sequence (454 letters)

Query ID:ds2016-55_22
Query definition:No definition line
Query length:575
Program:TBLASTX 2.2.29+
Database:/save/stheil/db/refseq_vir/viral.genomic.fna

Graphic Summary

Distribution of 6 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
46
92
138
184
230
276
322
368
414
454

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
313.6 777.4 27% 7.083e-85 30% NC_003604
204.1 274.8 43% 6.555e-52 39% NC_016404
217.8 329.8 34% 4.77e-56 48% NC_003602
216.0 382.7 19% 1.699e-55 32% NC_018458
102.3 232.9 26% 4.559e-33 41% NC_011106

Alignments

Grapevine virus A, complete genome

Sequence ID: Length: 7351 Number of Matches: 8

Range 1: 582 to 1034 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
313.6 bits(678) 0.0 122/151(81%) 0/151(0%) Minus/Plus
Query        2  HDEVQYWSLDEMQRFLGSLEHAKRVVYSIVYPAEVDAGFGQSLFPEAYTFDLKEGRLTWYPDGKAEGAYTQPVNPWLLGCSKTVDSRSRSWTITRLQTVGAHLLFSAVLGSFLTGDSYKYDNFTIINPNDILRGRRGCKPLYLRARMIRPT  454
                HDEVQYWSLDEMQRFLGSL    RVVYSI+YP+EV+AG+ QSLFPEAYTFDLK+ RL WYPDGKAEGAYTQPVNPWLL CSKT DS+ RSWTIT+LQT+GAH LFSA+ GS+LT +SYKYDNFTIINPND+L+G+RG KPLYLRARMI+PT
Subject    582  HDEVQYWSLDEMQRFLGSLSKVDRVVYSIIYPSEVEAGYSQSLFPEAYTFDLKDRRLVWYPDGKAEGAYTQPVNPWLLRCSKTEDSKGRSWTITKLQTIGAHHLFSAIKGSYLTEESYKYDNFTIINPNDVLKGKRGGKPLYLRARMIKPT  1034

Range 2: 584 to 1033 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
192.6 bits(414) 0.0 94/150(63%) 0/150(0%) Plus/Minus
Query        3  VGRIILARKYNGLHPLRPLRISLGLMIVKLSYLYESPVKKLPRTALNKRCAPTVWSLVIVQLLDLESTVLLHPSNQGFTG*VYAPSALPSGYHVNRPSFKSKV*ASGNKL*PNPASTSAGYTMLYTTLFACSRDPRNLCISSKLQY*TSS  452
                VG I+ AR+ +G  PL P R SLG MIVKLSYLY+S VK LP  AL +  AP VWS VIV     ES+V  H S+QGFTG V APSA PSGYH N  S +SKV ASGN+L   PASTS GY +LYTTL    R P+NLCISS+LQY*TSS
Subject    584  VGLIMRARR*SGFPPLFPFRTSLGFMIVKLSYLYDSSVK*LPFIALKR**APMVWSFVIVHDRPFESSVFEHLSSQGFTGCV*APSAFPSGYHTNLLSLRSKVYASGNRLCEYPASTSDGYMILYTTLSTLERLPKNLCISSRLQY*TSS  1033

Range 3: 648 to 902 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.5 bits(117) 0.0 30/85(35%) 0/85(0%) Plus/Minus
Query      134  CTEQEMCPHGLEPCDCPASGSGIDSLAAPE*PRVHWLSVRPLCFAIWIPC*PPFLQVESIGLRE*TLTEPRIYLRWVHNAVYHSL  388
                CT++ M   GLE CD P S   I    A E PRVH L +      + +P * P  +V+S+ L +* L    + L WV++ +++S+
Subject    648  CTKEVMSSDGLELCDRP*SPLRILRF*ASEQPRVHRLRIGSFSLPVRVPY*SPVFEVKSVRLWK*AL*ISSLDL*WVYDTIHYSI  902

Range 4: 933 to 1034 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
32.7 bits(65) 0.0 15/34(44%) 0/34(0%) Plus/Minus
Query        2  CWADHSCTQI*RLAPSSPPQNIIRVDDCEVVIFV  103
                CW DH+   I     S   QNI+RV D EV++ V
Subject    933  CWLDHAGP*IEWFPASLSLQNIVRVYDREVIVLV  1034

Range 5: 582 to 626 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
27.2 bits(53) 0.0 9/15(60%) 0/15(0%) Plus/Minus
Query      410  KPLHFIQTPVLNLVV  454
                +PLH + TPVLNL++
Subject    582  EPLHLV*TPVLNLIM  626

Range 6: 590 to 1033 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.0 bits(166) 0.0 45/148(30%) 0/148(0%) Minus/Plus
Query        3  GSILEFG*NAKVSGVSRTRKESGIQHCVPSGGRCGVRSEFIP*GLYFRLEGRAVNMVSRWQSRGGVHSTSEPLVTRVQQDCRFQIQKLDNHKAPNRGGTSLVQCSPG*FLNRGFIQI*QLHNHQP**YSEGAKRVQAVIFACKNDPPN  446
                GSILE   +AKV   S   + S + + +P  GR  + ++ I  G++F  + + ++MV   +    +++  EPL  ++ ++  F+   +D+HKAPN   +S + C+ G  L+ G +Q+  LH+H+P*  SEG +R +  +    +D  N
Subject    590  GSILESRRDAKVLR*SLQSR*SSV*YHIPIRGRGWIFTKPISRGVHF*PQRQEISMVPGREG*RSLYAACEPLAAQMLKNGGFEGAIMDDHKAPNHRSSSPL*CNKGQLLDGGIVQVR*LHDHKP*RCSEGKERRETTLSTGPHDQAN  1033

Range 7: 703 to 1035 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.6 bits(104) 0.0 38/111(34%) 0/111(0%) Minus/Plus
Query        1  RVYSLRPILST*RKGG*HGIQMAKQRGRTLNQ*TLGYSGAARLSIPDPEAGQSQGSKPWGHISCSVQSWVVS*PGIHTNMTTSQSSTLMIF*GGEEGASRYICVQE*SAQH  333
                + Y  R  L T + G *+G +  + +    + *TLG S A +  I   + G+SQ SKP   I+  VQ    +*    T+  TS+S TL +F*   E  +  I    *S+QH
Subject    703  KAYFQRRTLLTSKTGD*YGTRTGRLKEPIRSL*TLGCSDAQKRRIRRGDHGRSQSSKPSELITSLVQ*RAAT*RRNRTSTITSRS*TLTMF*REREAGNHSIYGPA*SSQH  1035

Range 8: 589 to 624 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.4 bits(49) 0.0 9/12(75%) 0/12(0%) Minus/Plus
Query      412  RFNTGVWMKCKG  447
                RFNTGV  +CKG
Subject    589  RFNTGV*TRCKG  624

Actinidia virus B, complete genome

Sequence ID: Length: 7488 Number of Matches: 2

Range 1: 569 to 1015 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
204.1 bits(439) 0.0 77/149(52%) 0/149(0%) Minus/Plus
Query        8  HDEVQYWSLDEMQRFLGSLEHAKRVVYSIVYPAEVDAGFGQSLFPEAYTFDLKEGRLTWYPDGKAEGAYTQPVNPWLLGCSKTVDSRSRSWTITRLQTVGAHLLFSAVLGSFLTGDSYKYDNFTIINPNDILRGRRGCKPLYLRARMIR  454
                HDEVQYWSL + Q  LG +   KR++YSI+YPAE+D G+  SLFPEAY F+ + G   W PDG+++GAY QP+NPWLL  SKT+DSR R+WTI ++ +  +H LF A LGS +T D Y YD++T+I    +  GRR    +YLR+R ++
Subject    569  HDEVQYWSLQDFQLVLGQMNKVKRLMYSIIYPAEIDQGYEHSLFPEAYHFERRGGYFIWLPDGQSDGAYKQPINPWLLSTSKTIDSRGRTWTIGKVTSFASHHLFVASLGSTITEDEYTYDDYTVIPRGALSSGRRDYSGMYLRSRYVQ  1015

Range 2: 571 to 945 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.7 bits(148) 0.0 49/125(39%) 0/125(0%) Plus/Minus
Query       78  MIVKLSYLYESPVKKLPRTALNKRCAPTVWSLVIVQLLDLESTVLLHPSNQGFTG*VYAPSALPSGYHVNRPSFKSKV*ASGNKL*PNPASTSAGYTMLYTTLFACSRDPRNLCISSKLQY*TSS  452
                M V  SY+Y S V  LPR A N+     + +  +V +  LES V    S+ G  G +YAPS  PSG  +  P   SK *ASGN     P S SAG  + Y + F     P     S + QY TSS
Subject    571  MTV*SSYVYSSSVMVLPRLATNRWWEAKLVTFPMVHVRPLESIVFEVLSSHGLIGCLYAPSDWPSGNQMKYPPRLSKW*ASGNNECS*PWSISAG*MIEYMSRFTLFICPSTSWKSCRDQYCTSS  945

Grapevine virus B, complete genome

Sequence ID: Length: 7599 Number of Matches: 2

Range 1: 541 to 984 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
217.8 bits(469) 0.0 87/148(59%) 0/148(0%) Minus/Plus
Query       11  HDEVQYWSLDEMQRFLGSLEHAKRVVYSIVYPAEVDAGFGQSLFPEAYTFDLKEGRLTWYPDGKAEGAYTQPVNPWLLGCSKTVDSRSRSWTITRLQTVGAHLLFSAVLGSFLTGDSYKYDNFTIINPNDILRGRRGCKPLYLRARMI  454
                HDEV YWSL + Q FLG L   +R++YS++YPAE+  GF QSLFPEAY FDL    +TWYPDGKA+G+Y QPVNPWLL  SKTVD   ++WT+T++ T+GAH LF A  GS LT + Y YD+FT+I P  +L+GRR  K  YLR+R I
Subject    541  HDEVHYWSLKDFQSFLGHLGGTQRLLYSVIYPAELHIGFEQSLFPEAYEFDLLGEYITWYPDGKADGSYKQPVNPWLLTTSKTVDVHGQTWTLTKVLTMGAHHLFLATRGSTLTEEEYHYDDFTVILPKKLLQGRRRNKMPYLRSRFI  984

Range 2: 543 to 971 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.0 bits(238) 0.0 69/143(48%) 0/143(0%) Plus/Minus
Query       24  RKYNGLHPLRPLRISLGLMIVKLSYLYESPVKKLPRTALNKRCAPTVWSLVIVQLLDLESTVLLHPSNQGFTG*VYAPSALPSGYHVNRPSFKSKV*ASGNKL*PNPASTSAGYTMLYTTLFACSRDPRNLCISSKLQY*TSS  452
                RKY  L  LRP R   G M VK S  Y S V  LPR A  + CAP V + V VQ+    STVL   S+QGFTG +  PSA PSGY V     KS  *ASGN+L   P  +SAG   LY       R PR L  S +LQ  TSS
Subject    543  RKYGILFLLRPCRSFFGRMTVKSS**YSSSVSVLPRVAKKR*CAPMVSTFVSVQVWPCTSTVLEVVSSQGFTGCL*EPSAFPSGYQVMYSPSKSNS*ASGNRLCSKPMCSSAG*ITLYNKR*VPPRWPRKLWKSLRLQ*CTSS  971

Grapevine virus F, complete genome

Sequence ID: Length: 7551 Number of Matches: 4

Range 1: 583 to 987 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
216.0 bits(465) 0.0 85/135(63%) 0/135(0%) Minus/Plus
Query       50  HDEVQYWSLDEMQRFLGSLEHAKRVVYSIVYPAEVDAGFGQSLFPEAYTFDLKEGRLTWYPDGKAEGAYTQPVNPWLLGCSKTVDSRSRSWTITRLQTVGAHLLFSAVLGSFLTGDSYKYDNFTIINPNDILRGR  454
                HDEVQYWSL ++Q FLG++E    V+YS+VYPAE+  G   SLFPEAY F++ +G   WYPDGKAEGAY QP+NPWLL  SKT D R R+WTIT+LQTVGAH LFS   GS +T DSY YD FT+INP +   GR
Subject    583  HDEVQYWSLADLQNFLGNVEDNTNVLYSVVYPAEITTGITFSLFPEAYEFEVHDGYFIWYPDGKAEGAYKQPINPWLLTTSKTEDVRYRTWTITKLQTVGAHHLFSCTPGSTITEDSYTYDQFTLINPYNCFAGR  987

Range 2: 585 to 929 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
100.5 bits(213) 0.0 57/115(50%) 0/115(0%) Plus/Minus
Query      108  SPVKKLPRTALNKRCAPTVWSLVIVQLLDLESTVLLHPSNQGFTG*VYAPSALPSGYHVNRPSFKSKV*ASGNKL*PNPASTSAGYTMLYTTLFACSRDPRNLCISSKLQY*TSS  452
                S V   P    N+ CAPTV SLVIVQ+L L S+VL   S+ G  G +YAPSA PSGY +  PS+ S  *ASGN     P   SAG T  Y T    S  P+  C S+  QY*TSS
Subject    585  SSVMVEPGVHENR*CAPTVCSLVIVQVLYLTSSVLDVVSSHGLIGCLYAPSAFPSGYQMK*PSWTSNS*ASGNSENVIPVVISAG*TTEYNTFVLSSTLPKKFCRSASDQY*TSS  929

Range 3: 587 to 685 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.3 bits(73) 0.0 14/33(42%) 0/33(0%) Minus/Plus
Query      352  TRFNTGVWMKCKGFWGL*NTQREWYTALCTQRR  450
                T+FNTG W  CK FW +    + +YT   T++R
Subject    587  TKFNTGHWQICKIFWVMWKIIQMYYTQWFTRQR  685

Range 4: 758 to 973 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.9 bits(59) 0.0 23/72(32%) 0/72(0%) Minus/Plus
Query       64  GIQMAKQRGRTLNQ*TLGYSGAARLSIPDPEAGQSQGSKPWGHISCSVQSWVVS*PGIHTNMTTSQSSTLMI  279
                G    KQ+    ++ T G     +L + D   GQS   + W HI+C     V+    I T MT+S   TL I
Subject    758  GTLTEKQKVHINSRSTHGCLPHPKLRMLDIGPGQSPNCRLWEHITCFHAHQVLPSRRIATPMTSSP**TLTI  973

Grapevine virus E, complete genome

Sequence ID: Length: 7564 Number of Matches: 4

Range 1: 721 to 933 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
102.3 bits(217) 0.0 36/71(51%) 0/71(0%) Minus/Plus
Query       71  TWYPDGKAEGAYTQPVNPWLLGCSKTVDSRSRSWTITRLQTVGAHLLFSAVLGSFLTGDSYKYDNFTIINP  283
                TW PDGK  G+Y QPVNPWLL  +KT+D + R+WT+T+L++VG+H LF    G  +T D   Y++FT+++P
Subject    721  TWMPDGKCCGSYKQPVNPWLLSTNKTMDLKGRTWTLTKLESVGSHHLFLCTPGDLVTEDEAVYNDFTLVDP  933

Range 2: 616 to 720 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
43.2 bits(88) 0.0 15/35(43%) 0/35(0%) Minus/Plus
Query      278  VVYSIVYPAEVDAGFGQSLFPEAYTFDLKEGRLTW  382
                ++Y+++YPAE+ AG+  SL+PE Y F + E   T+
Subject    616  LIYTVIYPAELHAGYPFSLYPELYDFRVSEDGKTF  720

Range 3: 550 to 597 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
33.6 bits(67) 0.0 11/16(69%) 0/16(0%) Minus/Plus
Query      407  HDEVQYWSLDEMQRFL  454
                HDEV YW+L + QRFL
Subject    550  HDEVHYWNLKDFQRFL  597

Range 4: 720 to 947 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.8 bits(111) 0.0 31/76(41%) 0/76(0%) Plus/Minus
Query       57  LRISLGLMIVKLSYLYESPVKKLPRTALNKRCAPTVWSLVIVQLLDLESTVLLHPSNQGFTG*VYAPSALPSGYHV  284
                L  S G   VK  Y   S V + P     + C PT+ S V VQ+L L S VL   +N GFTG +  P   PSG  V
Subject    720  LEKSFGSTSVKSLYTASSSVTRSPGVHKKR*CDPTLSSFVRVQVLPLRSMVLFVLNNHGFTGCL*EPQHFPSGIQV  947

Nucleotide Sequence (334 letters)

Query ID:ds2016-55_22
Query definition:No definition line
Query length:575
Program:TBLASTX 2.2.29+
Database:/save/stheil/db/refseq_vir/viral.genomic.fna

Graphic Summary

Distribution of 6 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
34
68
102
136
170
204
238
272
306
334

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
233.4 684.6 50% 6.055e-61 39% NC_003604
186.6 442.9 56% 7.103e-47 33% NC_003602
186.6 523.0 38% 7.103e-47 39% NC_018458
177.9 512.9 64% 2.966e-44 43% NC_016404
131.2 247.1 34% 3.48e-30 40% NC_011106

Alignments

Grapevine virus A, complete genome

Sequence ID: Length: 7351 Number of Matches: 6

Range 1: 4044 to 4373 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
233.4 bits(503) 0.0 91/110(83%) 0/110(0%) Plus/Plus
Query        3  NYEGKRRKYLACHGIGRQMFSVLKGVYQWRDIESLPELERCEKEFMRKRVEKSASLIEQHSGRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQTIACFAHSVLCRFG  332
                NYE  RRKY  CHGIG QMFSV K  YQ ++I+SLPELERCE EFM+KR+EKS  LIE+H+GRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQTIACFAHSVLCRFG
Subject   4044  NYEANRRKYKTCHGIGHQMFSVFKDTYQLKEIDSLPELERCEMEFMKKRIEKSTGLIEKHAGRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQTIACFAHSVLCRFG  4373

Range 2: 4043 to 4375 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
167.4 bits(359) 0.0 86/111(77%) 0/111(0%) Minus/Minus
Query        2  GPNLHSTECAKQAMV*PAFASTPRFSIFVQVCCFRNIXXXXXXXXXXXRPECCSISDALFSTLFLMNSFSHLSSSGRDSISLHW*TPFRTENIWRPIPWQARYFLLFPS*F  334
                GPNLHSTE AKQAMV PA ASTP FSIFVQVCCFRNILR*LLGQSGSL P C SIS  LFS LF MNS SHLSSSG +SISL W     TENIW PIPWQ  YFLL  S*F
Subject   4043  GPNLHSTE*AKQAMVCPALASTPLFSIFVQVCCFRNILR*LLGQSGSLLPACFSISPVLFSILFFMNSISHLSSSGSESISLSWYVSLNTENIWCPIPWQVLYFLLLAS*F  4375

Range 3: 4043 to 4342 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
96.4 bits(204) 0.0 44/100(44%) 0/100(0%) Plus/Plus
Query        2  KL*GEEEKVSRLPWNWAPNVFSSKGSLPMEGYRISARTREM*ERIHEKESGEKRITDRTALRSK*SRLAQQLPQDIPEAANLHEDGEARGRCKGRSNHRL  301
                KL* ++++V  LP   APNV   +G +P +   ++ART ++   +HE+E  E+    R A R +* RLA+QLPQ+IP+AA+LH++G+  G C G +NHRL
Subject   4043  KL*SQQKEVQDLPRYRAPNVLGVQGHIPAQRD*LTARTGKVRNGVHEEEDREEHRAYRKACRKE*PRLAEQLPQNIPKAADLHKNGKEGGGC*GGTNHRL  4342

Range 4: 4044 to 4370 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.1 bits(175) 0.0 42/109(39%) 0/109(0%) Minus/Minus
Query        3  KSA*YRVCKASDGLTGLCIYPSLLHLRAGLLLQEYLEVVAGPVWITST*VLFYQ*CAFLHSLSHEFFLTSLEFWQRFYIPPLVDSL*N*KHLAPNSMAGEILSPLPLII  329
                +S  +R+ +  DGL+ L I+P L H  AGLLL EY EV+A PVW+T + +LF +  A L+ L HE      +F Q   +  LV  L + +HL P ++A  +L  +  I+
Subject   4044  ESTQHRMSETGDGLSRLSIHPPLFHFCAGLLL*EYFEVIARPVWVTPSGMLFDKPGALLYPLLHELHFAPFQFGQ*VNLFELVCVLEHREHLVPYTVASLVLPSVGFIV  4370

Range 5: 4090 to 4338 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.3 bits(121) 0.0 34/83(41%) 0/83(0%) Plus/Plus
Query       49  GAKCFQF*RESTNGGI*NLCQNSRDVRKNS*EREWRKAHH**NSTQVEVIQTGPATTSRYS*SSKPARRWRSEG*MQRPVKPS  297
                G KC +  R  T+      C N +  + +S* R  R+A     S    V QTG A TS+YS*SS+PA++W+  G M R  KPS
Subject   4090  GTKCSRCSRTHTSSKRLTHCPNWKGAKWSS*RRG*RRAPGLSKSMPEGVTQTGRAITSKYS*SSRPAQKWKRGGWMLRRDKPS  4338

Range 6: 4234 to 4347 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.0 bits(94) 0.0 20/38(53%) 0/38(0%) Minus/Minus
Query      193  QSKRWFDRPLHLPLASPSSCRFAASGIS*GSCWASLDH  306
                +++RWF  P H P + P  CR AA GI *G+C ASL H
Subject   4234  RNRRWFVPP*HPPPSFPFLCRSAALGIF*GNCSASLGH  4347

Grapevine virus B, complete genome

Sequence ID: Length: 7599 Number of Matches: 5

Range 1: 3997 to 4320 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
186.6 bits(401) 0.0 75/108(69%) 0/108(0%) Plus/Plus
Query        9  EGKRRKYLACHGIGRQMFSVLKGVYQWRDIESLPELERCEKEFMRKRVEKSASLIEQHSGRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQTIACFAHSVLCRFG  332
                E  RRK+  C G G QMF V+K VY  +  + LP LER E++FM+KR+ KSA LIE+HS RS+PDWPSNYLKIFLKQQ CTKMEKR VDAKAGQTIACF H+VLCRFG
Subject   3997  EKNRRKFNKCKGFGAQMFGVMKSVYNLKQPDHLPLLERAEQDFMKKRIAKSAKLIEKHSYRSEPDWPSNYLKIFLKQQRCTKMEKRKVDAKAGQTIACFCHAVLCRFG  4320

Range 2: 3991 to 4320 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
85.4 bits(180) 0.0 47/110(43%) 0/110(0%) Minus/Minus
Query        3  AKSA*YRVCKASDGLTGLCIYPSLLHLRAGLLLQEYLEVVAGPVWITST*VLFYQ*CAFLHSLSHEFFLTSLEFWQRFYIPPLVDSL*N*KHLAPNSMAGEILSPLPLII  332
                +KSA +R+ KA  GL    I   L HL A LLLQE  +VV GPVW+ S  VL YQ C F     HE  L SL+     ++  +VD+L + +HL+P   A   L+P+ L I
Subject   3991  SKSAKHRMTKARYGLPSFRIDLPLFHLCASLLLQEDFQVVTGPVWLASVTVLLYQLCRFCDPFLHEILLCSLQQG*VIWLFQIVDALHHPEHLSPKPFAFVELAPIFLRI  4320

Range 3: 4011 to 4319 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.3 bits(147) 0.0 34/103(33%) 0/103(0%) Plus/Plus
Query       23  KVSRLPWNWAPNVFSSKGSLPMEGYRISARTREM*ERIHEKESGEKRITDRTALRSK*SRLAQQLPQDIPEAANLHEDGEARGRCKGRSNHRLLCTLCTMQIW  331
                +V ++   W  NV   +  L  E  R      E   R HE++  +    DR A   K +RLAQ LP+++ EA  +H+DG+  GRC+  +NH +L +   + IW
Subject   4011  QVQQMQRVWGSNVRGDEERLQSETTRSPTLVGESRARFHEEKDRKIGKADREAQLQKRARLAQ*LPENLLEATEMHKDGKEEGRCESWANHSVLLSCGALPIW  4319

Range 4: 4212 to 4322 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.7 bits(113) 0.0 24/37(65%) 0/37(0%) Minus/Minus
Query      224  GPNLHSTECAKQAMV*PAFASTPRFSIFVQVCCFRNI  334
                GPN  ST   K AMV PAFAST  FSIFV +CCF+ I
Subject   4212  GPNRQSTA*QKHAMVCPAFASTFLFSIFVHLCCFKKI  4322

Range 5: 4106 to 4318 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.0 bits(94) 0.0 28/71(39%) 0/71(0%) Plus/Plus
Query      118  RDVRKNS*EREWRKAHH**NSTQVEVIQTGPATTSRYS*SSKPARRWRSEG*MQRPVKPSLALHTLYYADL  330
                R+  K S* +  +    ** ST  E  QTGP TT + S*S++ A+RW+    M++  KP  A     +ADL
Subject   4106  REQSKIS*RKGSQNRQS**RSTVTEASQTGPVTT*KSS*SNRDAQRWKRGRSMRKLGKP*RAFVMRCFADL  4318

Grapevine virus F, complete genome

Sequence ID: Length: 7551 Number of Matches: 7

Range 1: 4108 to 4431 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
186.6 bits(401) 0.0 73/108(68%) 0/108(0%) Plus/Plus
Query        9  EGKRRKYLACHGIGRQMFSVLKGVYQWRDIESLPELERCEKEFMRKRVEKSASLIEQHSGRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQTIACFAHSVLCRFG  332
                E  R +Y    GIGRQMF VLK  Y W  I+SLP LE+ E +FM+KR+ KSA+L+E+H+ RSDPDWPSN +KIFLKQQ CTK+EKRGVDAKAGQTIACF+H+VLC+FG
Subject   4108  EKNRARYEKHKGIGRQMFDVLKKTYHWTSIDSLPPLEKAEADFMKKRLNKSAALLERHNIRSDPDWPSNIIKIFLKQQVCTKLEKRGVDAKAGQTIACFSHAVLCKFG  4431

Range 2: 4323 to 4433 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.9 bits(131) 0.0 26/37(70%) 0/37(0%) Minus/Minus
Query      224  GPNLHSTECAKQAMV*PAFASTPRFSIFVQVCCFRNI  334
                GPNLH T   KQA+V PAFASTP FS FV  CC RNI
Subject   4323  GPNLHKTA*EKQAIVWPAFASTPLFSSFVHTCCLRNI  4433

Range 3: 4113 to 4280 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.0 bits(94) 0.0 25/56(45%) 0/56(0%) Minus/Minus
Query       14  CCSISDALFSTLFLMNSFSHLSSSGRDSISLHW*TPFRTENIWRPIPWQARYFLLF  181
                C S + AL  +LF M S S  SS G +SI +     F+T NI RPIP    Y  LF
Subject   4113  CRSSNAALLFSLFFMKSASAFSSGGSESIEVQ*YVFFKTSNICRPIPLCFSYRALF  4280

Range 4: 4155 to 4430 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
69.3 bits(145) 0.0 36/92(39%) 0/92(0%) Plus/Plus
Query       56  NVFSSKGSLPMEGYRISARTREM*ERIHEKESGEKRITDRTALRSK*SRLAQQLPQDIPEAANLHEDGEARGRCKGRSNHRLLCTLCTMQIW  331
                NV   K  + ++ YR +  T E    +HEKE+ +K      A   +   LA Q  Q+IP+AA++HE GE RG CKG  N+RL  +   +QIW
Subject   4155  NV*CLKEDISLDFYRFTTPT*ESRG*LHEKEAEQKCCIAGAAQHKERP*LA*QHNQNIPQAASVHEAGEKRGGCKGGPNYRLFLSCSLVQIW  4430

Range 5: 4153 to 4404 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
64.3 bits(134) 0.0 34/84(40%) 0/84(0%) Minus/Minus
Query       54  KASDGLTGLCIYPSLLHLRAGLLLQEYLEVVAGPVWITST*VLFYQ*CAFLHSLSHEFFLTSLEFWQRFYIPPLVDSL*N*KHL  305
                +  D L  LCI+PS L LRA LLL+EY + VA P+ +    V   Q   F+  L HE  L  L++    Y  P++  L*+ KHL
Subject   4153  ETGDSLARLCIHPSFLQLRAHLLLEEYFDYVARPIRVAPYVVPLQQCSTFVQPLFHEVSLCFLKWG**IYRSPMICLL*DIKHL  4404

Range 6: 4211 to 4429 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.3 bits(97) 0.0 29/73(40%) 0/73(0%) Minus/Minus
Query      112  QICIVQSVQSKRWFDRPLHLPLASPSSCRFAASGIS*GSCWASLDHFDLSAVLSVMRFSPLSFS*ILSHISRV  330
                QIC     +++R F  PLH PL SP+SC  AA GI *  C A+       A  ++  F   SFS*    +S+V
Subject   4211  QICTRLHERNRR*FGPPLHPPLFSPASCTLAA*GIF*LCC*ANQGRSLCCAAPAMQHFCSASFS*SQPLLSQV  4429

Range 7: 4154 to 4396 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.4 bits(95) 0.0 34/81(42%) 0/81(0%) Plus/Plus
Query       55  KCFQF*RESTNGGI*NLCQNSRDVRKNS*EREWRKAHH**NSTQVEVIQTGPATTSRYS*SSKPARRWRSEG*MQRPVKPS  297
                KC   *R    G +*    + R  R  S*+R   K  H  + T       G AT S+YS SSK AR WR EG MQR  K S
Subject   4154  KCLMS*RRHIIGLL*IHYPHLRKQRLTS*KRG*TKVLHCWSGTT*GATLIGLAT*SKYSSSSKCARSWRKEGWMQRRAKLS  4396

Actinidia virus B, complete genome

Sequence ID: Length: 7488 Number of Matches: 7

Range 1: 4019 to 4342 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
177.9 bits(382) 0.0 71/108(66%) 0/108(0%) Plus/Plus
Query        9  EGKRRKYLACHGIGRQMFSVLKGVYQWRDIESLPELERCEKEFMRKRVEKSASLIEQHSGRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQTIACFAHSVLCRFG  332
                E   R++    G G+Q+F VLK  Y  R  + LP+L+R E EF RKR+ KS +LIE+HS RSDPDWPS+YLKIFLKQQ CTKMEKRGVDAKAGQTIACF H+VLC+FG
Subject   4019  EKNHRRFNKVKGFGKQLFKVLKETYNLRQPDKLPDLDRIEAEFARKRLNKSKNLIEKHSYRSDPDWPSHYLKIFLKQQVCTKMEKRGVDAKAGQTIACFCHAVLCKFG  4342

Range 2: 4234 to 4344 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.3 bits(147) 0.0 29/37(78%) 0/37(0%) Minus/Minus
Query      224  GPNLHSTECAKQAMV*PAFASTPRFSIFVQVCCFRNI  334
                GPNLHST   K AMV*PAFASTP FSIFV  CCFR I
Subject   4234  GPNLHSTAWQKHAMV*PAFASTPLFSIFVHTCCFRKI  4344

Range 3: 4048 to 4194 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.5 bits(58) 0.0 21/49(43%) 0/49(0%) Minus/Minus
Query       38  ECCSISDALFSTLFLMNSFSHLSSSGRDSISLHW*TPFRTENIWRPIPW  184
                EC SI       LFL NS S LS SG  S  L     FRT     P P+
Subject   4048  ECFSIKFLDLFNLFLANSASILSRSGSLSGCLKLYVSFRTLKSCLPKPF  4194

Range 4: 4064 to 4333 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
74.4 bits(156) 0.0 40/90(44%) 0/90(0%) Minus/Minus
Query       54  A*YRVCKASDGLTGLCIYPSLLHLRAGLLLQEYLEVVAGPVWITST*VLFYQ*CAFLHSLSHEFFLTSLEFWQRFYIPPLVDSL*N*KHL  323
                A*+ + +A DGLTG  + PSLLH RA LLLQE  EVVA P+ + S *+ FYQ   F+   S EF L  ++  +  ++  +V  L*+ K L
Subject   4064  A*HSMAEACDGLTGFRVNPSLLHFRAYLLLQEDFEVVAWPIRVRSI*MFFYQILRFIQPFSCEFGLYPVKVRELIWLSQVVCLL*DLKKL  4333

Range 5: 4213 to 4338 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.7 bits(124) 0.0 23/42(55%) 0/42(0%) Plus/Plus
Query      203  LAQQLPQDIPEAANLHEDGEARGRCKGRSNHRLLCTLCTMQI  328
                LA+ LPQ++PEA ++HE+GE RG  + RS+HR+L   C MQI
Subject   4213  LAKPLPQNLPEATSMHENGEERG*RESRSDHRMLLPCCAMQI  4338

Range 6: 4137 to 4337 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.2 bits(112) 0.0 29/67(43%) 0/67(0%) Plus/Plus
Query      127  RKNS*EREWRKAHH**NSTQVEVIQTGPATTSRYS*SSKPARRWRSEG*MQRPVKPSLALHTLYYAD  327
                R NS E+       ** +  +++   G ATTS+ S*S+K AR+WR EG  ++PV+PS A   L YA+
Subject   4137  RPNSQEKG*INLRI**KNIHIDLTLIGQATTSKSS*SNKYARKWRREGLTRKPVRPSHASAMLCYAN  4337

Range 7: 4179 to 4340 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.9 bits(96) 0.0 24/54(44%) 0/54(0%) Minus/Minus
Query      169  QICIVQSVQSKRWFDRPLHLPLASPSSCRFAASGIS*GSCWASLDHFDLSAVLS  330
                +ICI Q  +S RW DR    PL+SP SC   ASG  *GS  A+     ++  LS
Subject   4179  RICIAQHGRSMRWSDRLSRQPLSSPFSCILVASGRF*GSGLANQGQIYMNVFLS  4340

Grapevine virus E, complete genome

Sequence ID: Length: 7564 Number of Matches: 4

Range 1: 4153 to 4359 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
131.2 bits(280) 0.0 50/69(72%) 0/69(0%) Plus/Plus
Query      126  EKEFMRKRVEKSASLIEQHSGRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQTIACFAHSVLCRFG  332
                E +F  KR++KSA ++E HS RSD DWPSNYLKIF+K Q CTKMEKRG DAKAGQTIACF+H+VLC+FG
Subject   4153  ELDFTMKRIQKSARILEAHSYRSDADWPSNYLKIFIKNQDCTKMEKRGSDAKAGQTIACFSHAVLCKFG  4359

Range 2: 4227 to 4361 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.1 bits(103) 0.0 18/45(40%) 0/45(0%) Plus/Plus
Query      200  RLAQQLPQDIPEAANLHEDGEARGRCKGRSNHRLLCTLCTMQIWP  334
                RLA+QL ++  +   LH+DGE   RC+  +N+ +  + C +QIWP
Subject   4227  RLAKQLSENFYQEPGLHQDGEKGFRCQSWANNSMFLSRCVVQIWP  4361

Range 3: 4272 to 4361 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
42.8 bits(87) 0.0 19/30(63%) 0/30(0%) Minus/Minus
Query      245  GPNLHSTECAKQAMV*PAFASTPRFSIFVQ  334
                GPNLH+T   K A+V PA AS P FSI VQ
Subject   4272  GPNLHNTA*EKHAIVCPALASEPLFSILVQ  4361

Range 4: 4137 to 4208 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.1 bits(44) 0.0 12/24(50%) 0/24(0%) Minus/Minus
Query      110  CCSISDALFSTLFLMNSFSHLSSS  181
                C S   ALF  LF++ S S L SS
Subject   4137  CASSILALFCILFIVKSSSMLVSS  4208

Nucleotide Sequence (367 letters)

Query ID:ds2016-55_22
Query definition:No definition line
Query length:575
Program:TBLASTX 2.2.29+
Database:/save/stheil/db/refseq_vir/viral.genomic.fna

Graphic Summary

Distribution of 6 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
37
74
111
148
185
222
259
296
333
367

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
241.6 676.8 11% 2.303e-63 42% NC_003604
133.0 214.4 44% 1.129e-30 42% NC_016404
139.4 244.5 36% 1.323e-32 49% NC_018458
69.3 192.6 32% 7.123e-22 44% NC_003602
47.8 111.3 26% 2.181e-13 40% NC_011062

Alignments

Grapevine virus A, complete genome

Sequence ID: Length: 7351 Number of Matches: 6

Range 1: 2787 to 3152 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
241.6 bits(521) 0.0 98/122(80%) 0/122(0%) Plus/Plus
Query        2  VLLGKYNKGKMHSASLEEPIEVLTSFGFAGSGKSHWSQTILQSCEVEKTLVISPRKVLKDDWVGKISKKHKVVTFEVAFTDDFGCKAIVIDEIGLLPPGYVDLVISVFHPTTLVLLGDPPQS  367
                VLLGKYNKGKMH+  +EEP EVLT+FGFAGSGKSHW QTIL+ C VEK LVISPRKVL+DDWV KISKKH+VVTFEVAF DD+GCK IVIDEIGLLPPGY+DLVI+   P TLVLLGDP QS
Subject   2787  VLLGKYNKGKMHTGEIEEPKEVLTAFGFAGSGKSHWCQTILKHCSVEKVLVISPRKVLRDDWVAKISKKHRVVTFEVAFMDDYGCKDIVIDEIGLLPPGYIDLVIAAHQPRTLVLLGDPLQS  3152

Range 2: 2786 to 3142 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
174.7 bits(375) 0.0 82/119(69%) 0/119(0%) Minus/Minus
Query        1  GSPNKTRVVG*KTEMTRST*PGGSNPISSITMALQPKSSVKATSKVTTLCFFEIFPTQSSLRTFLGLITNVFSTSQLWSMV*LQ*LFPDPAKPKEVSTSIGSSKLAECILPLLYFPRRT  357
                GSP  TRV G*   +TRS  PGG  PISSIT++LQP SS+ ATSKVTTLCF +IF TQSSL TFLGLIT+ FST Q  SMV  Q*LFPDPA PK V TS GSS    CILPLLY P RT
Subject   2786  GSPRSTRVRG*CAAITRSMYPGGRRPISSITISLQP*SSMNATSKVTTLCFLDIFATQSSLSTFLGLITSTFSTEQCLSMVWHQ*LFPDPANPKAVRTSFGSSISPVCILPLLYLPSRT  3142

Range 3: 2787 to 3095 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.2 bits(173) 0.0 43/103(42%) 0/103(0%) Minus/Minus
Query        2  QIHVAGWEQPYLVYNYGLAAKVISKGDFKGYHXXXXXXXXXXVILENLPWTDN*CFLNFTTLEYGLTPVTFSGPGETKGGQYLNWFLQTGRMHLAFIVLPEKN  310
                +++V  W +  LVY+   AA V+ +   + YH +LL     P+I E+ PW ++  FL+ T  +YGL PVTF    ++KG   L W L   RMHLAFIVL E+N
Subject   2787  KVYVPRW*KTDLVYHDIFAAVVVHECHLESYHSMLLGYFCYPIISEHFPWANHKHFLHGTVFKYGLAPVTFP*SCKSKGR*NLFWLLYLARMHLAFIVLAEQN  3095

Range 4: 2789 to 3079 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.1 bits(151) 0.0 41/97(42%) 0/97(0%) Plus/Plus
Query        4  SSREVQ*RQDAFCQFGGTN*GTDLLWFRRVRKKSLESNHTPEL*S*ENISYQSKEGSQG*LGREDLKEAQGGNL*SRLY**LWLQGHSYRRDRVAPT  294
                S+R+VQ*RQDA+ +  G   G++ LW  R+R+KSL  NHT  L   E+     KE +Q *LG ++++EA  GN    ++  L LQ +  RRDR + T
Subject   2789  SARQVQ*RQDAYGRDRGAKRGSNGLWICRIREKSLVPNHT*TLFRGESACD*PKESAQR*LGSKNIQEA*SGNFRGGIHGRLRLQRYRDRRDRSSTT  3079

Range 5: 2788 to 3045 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.0 bits(129) 0.0 38/86(44%) 0/86(0%) Plus/Plus
Query        3  FFSGSTIKARCILPVWRNQLRY*PPLVSPGPEKVTGVKPYSRVVKLRKH*LSVQGRFSRMTGSGRSQRSTRW*PLKSPLLMTLAAR  260
                F S STIKARCI    R+Q R+* PL      KVTG KPY   V  RK     QG+ S M G  +  RS  W*  +     T AA+
Subject   2788  FCSASTIKARCIRAR*RSQKRF*RPLDLQDQGKVTGAKPYLNTVPWRKCL*LAQGKCSEMIG*QKYPRSIEW*LSRWHSWTTTAAK  3045

Range 6: 2788 to 2907 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
44.1 bits(90) 0.0 20/40(50%) 0/40(0%) Minus/Minus
Query        3  VWFDSSDFFRTRRNQRRSVPQLVPPNWQNASCLYCTSREE  122
                VWF +SDF    + QR   P L P +   ASCLYCT R E
Subject   2788  VWFGTSDFSLILQIQRPLEPLLAPLSRPYASCLYCTCRAE  2907

Actinidia virus B, complete genome

Sequence ID: Length: 7488 Number of Matches: 3

Range 1: 2756 to 3121 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
133.0 bits(284) 0.0 62/122(51%) 0/122(0%) Plus/Plus
Query        2  VLLGKYNKGKMHSASLEEPIEVLTSFGFAGSGKSHWSQTILQSCEVEKTLVISPRKVLKDDWVGKISKKHKVVTFEVAFTDDFGCKAIVIDEIGLLPPGYVDLVISVFHPTTLVLLGDPPQS  367
                V L KY K  + +      I+V   FGFAGSGKS++ QT+L+ C ++ TLVI PRK LK DW  K+     V TFE AF    G + I+IDE+GLLPPGY+DLV + F   T++LLGDP QS
Subject   2756  VNLNKYQKRPLGTDIDNTLIDVYGLFGFAGSGKSYYPQTLLRCCNMKDTLVIVPRKALKADWSEKVKDGAIVRTFESAFNGRKGYENIIIDEVGLLPPGYIDLVHANFQYDTMLLLGDPLQS  3121

Range 2: 2899 to 3117 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.4 bits(119) 0.0 31/73(42%) 0/73(0%) Minus/Minus
Query      145  CGGSPNKTRVVG*KTEMTRST*PGGSNPISSITMALQPKSSVKATSKVTTLCFFEIFPTQSSLRTFLGLITNV  363
                C GSPN + V   K   TRS  PGG  P SSI +   P   +KA SKV T+     F  QS+   F G +T+V
Subject   2899  CSGSPNNSIVSYWKLACTRSMYPGGRRPTSSIMIFSYPFLPLKALSKVLTMAPSFTFSLQSAFSAFRGTMTSV  3117

Range 3: 2812 to 2859 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.0 bits(46) 0.0 11/16(69%) 0/16(0%) Minus/Minus
Query       58  *LFPDPAKPKEVSTSI  105
                *LFP PA PK   TSI
Subject   2812  *LFPLPANPKRPYTSI  2859

Grapevine virus F, complete genome

Sequence ID: Length: 7551 Number of Matches: 2

Range 1: 2815 to 3177 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
139.4 bits(298) 0.0 60/121(50%) 0/121(0%) Plus/Plus
Query        2  VLLGKYNKGKMHSASLEEPIEVLTSFGFAGSGKSHWSQTILQSCEVEKTLVISPRKVLKDDWVGKISKKHKVVTFEVAFTDDFGCKAIVIDEIGLLPPGYVDLVISVFHPTTLVLLGDPPQ  364
                +LL K+ +GK     + + I+ ++ FGFAGSGKS++ QT+LQ     + LVISPRK L  DW  KI  + KVVTFE A  ++     IV+DE+GL PPGY+DL+  +  P+TLVLLGDP Q
Subject   2815  ILLNKFKRGKSVIKDVRKEIKFVSFFGFAGSGKSYYPQTVLQHTFGIRALVISPRKALAADWSSKIGSRAKVVTFEKAVVEEEVFSCIVVDELGLYPPGYLDLICLLHEPSTLVLLGDPLQ  3177

Range 2: 2832 to 3176 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
105.1 bits(223) 0.0 56/115(49%) 0/115(0%) Minus/Minus
Query       19  CGGSPNKTRVVG*KTEMTRST*PGGSNPISSITMALQPKSSVKATSKVTTLCFFEIFPTQSSLRTFLGLITNVFSTSQLWSMV*LQ*LFPDPAKPKEVSTSIGSSKLAECILPLL  363
                C GSPN TRV+G      RS *PGG  P SS TM L   SS  A S VTT     IF  QS+   FLGLIT+    +  WS V*  *L PDPAKPK+++  I        +LPLL
Subject   2832  CKGSPNNTRVLGSCNRQIRSR*PGGYRPNSSTTMQLNTSSSTTAFSNVTTFARDPIFELQSAANAFLGLITSARMPNVCWSTV*G**LLPDPAKPKKLTNFISFLTSLITLLPLL  3176

Grapevine virus B, complete genome

Sequence ID: Length: 7599 Number of Matches: 4

Range 1: 2764 to 2979 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
69.3 bits(145) 0.0 32/72(44%) 0/72(0%) Plus/Plus
Query       23  KGKMHSASLEEPIEVLTSFGFAGSGKSHWSQTILQSCEVEKTLVISPRKVLKDDWVGKISKKHKVVTFEVAF  238
                K   +  + +E I+V  + GFAGSGKS + Q +L++     +LVI PRK L  DW  K+    KVVTFE AF
Subject   2764  KSSFNLVNGKELIDVHLTLGFAGSGKSFYPQCVLKNSHYANSLVIVPRKALCSDWSNKVHPDVKVVTFESAF  2979

Range 2: 2995 to 3108 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.8 bits(111) 0.0 23/38(61%) 0/38(0%) Plus/Plus
Query      251  GCKAIVIDEIGLLPPGYVDLVISVFHPTTLVLLGDPPQ  364
                G   IVIDEIGLLPPGY+D+V   F   +L++LGDP Q
Subject   2995  GYGLIVIDEIGLLPPGYIDMVHGYFCYDSLLVLGDPLQ  3108

Range 3: 3003 to 3107 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
42.3 bits(86) 0.0 20/35(57%) 0/35(0%) Minus/Minus
Query      259  CGGSPNKTRVVG*KTEMTRST*PGGSNPISSITMA  363
                C GSPN  R+   K   T S  PGG+NPISSITM+
Subject   3003  CKGSPNTRRLS*QK*PCTMSMYPGGNNPISSITMS  3107

Range 4: 2793 to 2843 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
27.2 bits(53) 0.0 11/17(65%) 0/17(0%) Minus/Minus
Query       52  LFPDPAKPKEVSTSIGS  102
                L PDPAKP+   TSI S
Subject   2793  LLPDPAKPRVRCTSISS  2843

Potato virus T, complete genome

Sequence ID: Length: 6539 Number of Matches: 3

Range 1: 2604 to 2759 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.8 bits(98) 0.0 21/52(40%) 0/52(0%) Plus/Plus
Query      212  KVVTFEVAFTDDFGCKAIVIDEIGLLPPGYVDLVISVFHPTTLVLLGDPPQS  367
                KV+TFE           IVIDE+ L+P GY+D++I++    T + L DP Q+
Subject   2604  KVMTFEAGLRRVQKSSLIVIDELSLMPNGYLDMLINMNEEATFITLFDPLQA  2759

Range 2: 2517 to 2591 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.6 bits(78) 0.0 14/25(56%) 0/25(0%) Plus/Plus
Query      140  EKTLVISPRKVLKDDWVGKISKKHK  214
                +KTLV+SPRK L DDWV  ++  H+
Subject   2517  KKTLVLSPRKNLADDWVKNLANLHR  2591

Range 3: 2436 to 2504 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.9 bits(48) 0.0 11/23(48%) 0/23(0%) Plus/Plus
Query       62  EVLTSFGFAGSGKSHWSQTILQS  130
                E+L   GFAGSGK+     I++S
Subject   2436  EILVVAGFAGSGKTRGICQIVKS  2504

Nucleotide Sequence (463 letters)

Query ID:ds2016-55_22
Query definition:No definition line
Query length:575
Program:TBLASTX 2.2.29+
Database:/save/stheil/db/refseq_vir/viral.genomic.fna

Graphic Summary

Distribution of 6 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
47
94
141
188
235
282
329
376
423
463

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
268.2 922.2 38% 3.298e-71 51% NC_003604
203.6 410.6 31% 9.267e-52 36% NC_018458
89.0 333.6 40% 2.184e-37 35% NC_016404
80.8 157.0 29% 8.599e-32 50% NC_003602
63.4 89.2 18% 1.038e-11 48% NC_011106

Alignments

Grapevine virus A, complete genome

Sequence ID: Length: 7351 Number of Matches: 8

Range 1: 6414 to 6833 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
268.2 bits(579) 0.0 112/140(80%) 0/140(0%) Plus/Plus
Query       17  MGQYARRGEIRAVIEELVLARAELSEDTSSEGYDRTMYLNTLFGYIALVGTSKKATHYGEVDIVGPNASRKTGLDPRGKINVASMVTRMRTLSAAVSEGPVKGATLRQMCEPFAQNAYDFLVVMAELGTYTQLASKMTRS  436
                M  YA+R EIRA+IEELVLA+A+ ++D S  GYDR MYLNTLFGYIALVGTSKKA HYGEVDIVGP AS+KTG+DPRGK+ V+ +V RMRTLS AVSEGPVKGATLRQMCEPFAQNAYDFLVVMAE+GTY+QLA+KMTRS
Subject   6414  MAHYAKRVEIRAIIEELVLAKAQPTDDASESGYDRNMYLNTLFGYIALVGTSKKAIHYGEVDIVGPKASKKTGIDPRGKMVVSELVGRMRTLSVAVSEGPVKGATLRQMCEPFAQNAYDFLVVMAEMGTYSQLATKMTRS  6833

Range 2: 6521 to 6832 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
189.8 bits(408) 0.0 87/104(84%) 0/104(0%) Minus/Minus
Query      124  DLVILLANCVYVPNSAITTRKS*AF*ANGSHICLRVAPLTGPSLTAALSVLMRVTMLATFILPLGSRPVFLLALGPTISTSP**VAFLLVPTKAIYPKRVFRYI  435
                DLVIL+ANC YVP SAITTRKS*AF ANGSHICLRVAPLTGPSLTA LSV +  T   T I PLGS PVFLLALGPTISTSP**+AFLLVPTKA+YPKRVFRYI
Subject   6521  DLVILVANCEYVPISAITTRKS*AFCANGSHICLRVAPLTGPSLTATLSVRILPTSSDTTIFPLGSIPVFLLALGPTISTSP**IAFLLVPTKAMYPKRVFRYI  6832

Range 3: 6408 to 6833 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
153.2 bits(328) 0.0 73/142(51%) 0/142(0%) Minus/Minus
Query       11  *PSHLACQLRVRS*LSHNNQEIVSVLSEWFAHLPQGCPLDRSLAYRCTKCSHAGHHASHVYFTPRVQASLPTCIRSYYIYLSIMSRLFASSDQGDIPEESIQVHSSVVAFTAGVLTQLRPREHELLYHRSDLPPPCVLTHES  436
                *PSHL   L V +  SH+ +EIV VL EW AHLPQ C LD SLAY  T+ +H      H +  P V   L    R+YYIYL IM+RLFA  DQGD+PEES+QVH SVVA    V++ L  R+H+L Y+R  L P  V+ H S
Subject   6408  *PSHLGG*L*VCAHFSHHYEEIVGVLCEWLAHLPQSCALDGSLAYCHTQRAHPADQLRHHHLPPGVDPRLLASFRTYYIYLPIMNRLFACPDQGDVPEESVQVHISVVAALRSVVSWLGFRQHQLFYYRPYLYPLGVVCHLS  6833

Range 4: 6506 to 6646 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
77.1 bits(162) 0.0 33/47(70%) 0/47(0%) Plus/Plus
Query      109  RLRPNYVPEYSLRVYRLGRN*QKGDSLWRGRYSRT*CK*EDWPGPEG  249
                RLRP YVPE+SLRV+RLGR+ QKGDSLW GRYSR+*   ED   P+G
Subject   6506  RLRPKYVPEHSLRVHRLGRDKQKGDSLWGGRYSRS*S*QEDGDRPQG  6646

Range 5: 6692 to 6832 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
60.2 bits(125) 0.0 28/47(60%) 0/47(0%) Plus/Plus
Query      295  CSGKRGTCQGGNPEADVRTIRSKRLRFPGCYG*VRNVHAVGKQDD*V  435
                C  KRGT QG N EADVR IR++RLRFP   G*  ++  V  QDD*V
Subject   6692  CGSKRGTRQGRNSEADVRAIRTERLRFPRSDG*NGHILTVSHQDD*V  6832

Range 6: 6508 to 6750 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.5 bits(165) 0.0 45/81(56%) 0/81(0%) Plus/Plus
Query      111  ATTELCT*ILSSGISPWSELAKRRLIMER*I**DLMQVGRLAWTRGVK*TWLAW*PA*EHLVQR*ARDLSRGQP*GRCANH  353
                ATTE+CT* LSSG SPWS  AKRR IM R*I** L    R   T G +    +W       V +*ARD SR Q *GRCA+H
Subject   6508  ATTEICT*TLSSGTSPWSGQAKRRFIMGR*I**VLKLARRRGSTPGGRWWCRSWSAGCAR*VWQ*ARDPSRAQL*GRCASH  6750

Range 7: 6508 to 6585 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.2 bits(101) 0.0 21/26(81%) 0/26(0%) Minus/Minus
Query      111  NESPFC*FRPRRYTRREYSGT*FGRS  188
                NESPFC  RPRR TRRE SGT FGRS
Subject   6508  NESPFCLSRPRRCTRRECSGTYFGRS  6585

Range 8: 6691 to 6834 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.0 bits(94) 0.0 27/48(56%) 0/48(0%) Minus/Minus
Query      294  LT*SSCLPTACTFLTQP*QPGNRKRFERMVRTSASGLPP*QVPRLPLH  437
                LT*SS   T      QP   GNR+R  RM RTSAS L P*+VPRL  H
Subject   6691  LT*SSWWLTVSMCPFQPSLRGNRRRSVRMARTSASELRP*RVPRLLPH  6834

Grapevine virus F, complete genome

Sequence ID: Length: 7551 Number of Matches: 3

Range 1: 6507 to 6932 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
203.6 bits(438) 0.0 86/142(61%) 0/142(0%) Plus/Plus
Query       17  MGQYARRGEIRAVIEELVLARAELSEDTSSEGYDRTMYLNTLFGYIALVGTSKKATHYGEVDIVGPNASRKTGLDPRGKINVASMVTRMRTLSAAVSEGPVKGATLRQMCEPFAQNAYDFLVVMAELGTYTQLASKMTRSAN  442
                M Q +RR  +R V+E LVL+ A LSE+T + GYD+ MYL TLFGYIALVGTSKKA HYGEV I+GP  ++  G+D RG IN+A  V RMR LS AV+EG  K AT+RQMCEPFA+ AY+ L+++A LG Y+QLA KM+R  N
Subject   6507  MAQISRRMNMREVVETLVLSGANLSENTETAGYDKQMYLRTLFGYIALVGTSKKAVHYGEVQIMGPRTNKVRGVDARGVINIAEQVNRMRGLSVAVTEGVAKDATVRQMCEPFAKEAYEALIMLAGLGVYSQLAIKMSRLGN  6932

Range 2: 6614 to 6934 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
116.5 bits(248) 0.0 58/107(54%) 0/107(0%) Minus/Minus
Query      124  VLADLVILLANCVYVPNSAITTRKS*AF*ANGSHICLRVAPLTGPSLTAALSVLMRVTMLATFILPLGSRPVFLLALGPTISTSP**VAFLLVPTKAIYPKRVFRYI  444
                +L +L+I +A+C Y P  A   R S A  A GSHI   VA    PS+TA LS  MR+T  A FI PL S P+ LL  GP I TSP*  AFLLVPT A+YPKRV +YI
Subject   6614  LLPNLLIFIASCEYTPRPASMIRASYASLAKGSHI*RTVASFATPSVTATLSPRMRLTCSAMFITPLASTPLTLLVRGPII*TSP*CTAFLLVPTSAMYPKRVLKYI  6934

Range 3: 6507 to 6932 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.4 bits(191) 0.0 51/142(36%) 0/142(0%) Minus/Minus
Query       17  IG*PSHLACQLRVRS*LSHNNQEIVSVLSEWFAHLPQGCPLDRSLAYRCTKCSHAGHHASHVYFTPRVQASLPTCIRSYYIYLSIMSRLFASSDQGDIPEESIQVHSSVVAFTAGVLTQLRPREHELLYHRSDLPPPCVLTH  442
                I *P+HL C LRV +    +++ +V  LS+ FAHL        +L    T+  HA    S+VY+TP +        R +Y+ L IM RL A S+  ++PEE  QVH  VV  +  VLTQ+ P + +   H   + P   L+H
Subject   6507  IA*PTHLYC*LRVHTQARKHDKSLVCFLSKGFAHLTHSRIFCHTLCNCHTQPPHAVDLFSYVYYTPSIYTPNLISARPHYLNLPIMYRLLAGSN*RNVPEEGPQVHLLVVPSSLRVLTQVGP*QDQCFDHLPHVHPS*YLSH  6932

Actinidia virus B, complete genome

Sequence ID: Length: 7488 Number of Matches: 6

Range 1: 6488 to 6691 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
89.0 bits(188) 0.0 38/68(56%) 0/68(0%) Plus/Plus
Query       14  LMGQYARRGEIRAVIEELVLARAELSEDTSSEGYDRTMYLNTLFGYIALVGTSKKATHYGEVDIVGPN  217
                + G  +R G +R  IEELVL    L+ D  + G D+ MYL TLFGYIAL GTSKK THY +VDI+G N
Subject   6488  MSGATSRTGNLRKEIEELVLTGVVLAPDAKTAGVDKGMYLRTLFGYIALNGTSKKTTHYDDVDIIGNN  6691

Range 2: 6686 to 6904 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
86.8 bits(183) 0.0 36/73(49%) 0/73(0%) Plus/Plus
Query      215  NASRKTGLDPRGKINVASMVTRMRTLSAAVSEGPVKGATLRQMCEPFAQNAYDFLVVMAELGTYTQLASKMTR  433
                N   +T +D RGKINVA+ V +M + S     G  KGATLRQMCEPFA+ A + L ++A  G Y+QLA+K+++
Subject   6686  NNITETSIDSRGKINVATAVRQMLSFSRITPTGAAKGATLRQMCEPFAEEARECLAILASKGIYSQLATKLSK  6904

Range 3: 6715 to 6906 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.4 bits(108) 0.0 28/64(44%) 0/64(0%) Minus/Minus
Query      244  DLVILLANCVYVPNSAITTRKS*AF*ANGSHICLRVAPLTGPSLTAALSVLMRVTMLATFILPL  435
                +L  L+A+C  +P  A   + S A  A GSHICLRVAP   P       + + +T +ATFILPL
Subject   6715  NLESLVASCE*MPLLANIAKHSLASSAKGSHICLRVAPFAAPVGVILEKLSICLTAVATFILPL  6906

Range 4: 6598 to 6690 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.2 bits(77) 0.0 18/31(58%) 0/31(0%) Minus/Minus
Query      124  LGPTISTSP**VAFLLVPTKAIYPKRVFRYI  216
                L P ISTS * V F  VP  A+YP RV RY+
Subject   6598  LFPIISTSS*WVVFFEVPFSAMYPNRVLRYM  6690

Range 5: 6677 to 6838 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
42.3 bits(86) 0.0 19/54(35%) 0/54(0%) Minus/Minus
Query      206  SVLSEWFAHLPQGCPLDRSLAYRCTKCSHAGHHASHVYFTPRVQASLPTCIRSY  367
                S   E F HLPQ CP   S      +  H  H    +YFTP +  SL   +  Y
Subject   6677  SFFRERFTHLPQSCPFCCSGRCYPREAEHLPHRGCDIYFTPAIYTSLCNIVPYY  6838

Range 6: 6533 to 6625 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.9 bits(48) 0.0 11/31(35%) 0/31(0%) Minus/Minus
Query       59  IPEESIQVHSSVVAFTAGVLTQLRPREHELL  151
                +PE+  QVH+ V      +  Q  P +H+LL
Subject   6533  VPEQGPQVHAFVNPRCFRIRCQDHPGQHQLL  6625

Grapevine virus B, complete genome

Sequence ID: Length: 7599 Number of Matches: 2

Range 1: 6658 to 6858 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.8 bits(170) 0.0 34/67(51%) 0/67(0%) Plus/Plus
Query      233  GLDPRGKINVASMVTRMRTLSAAVSEGPVKGATLRQMCEPFAQNAYDFLVVMAELGTYTQLASKMTR  433
                G+D RG IN++  V +M   S AV  G  KG TLRQMCEPFA+ A D L ++A L  Y++LA KM +
Subject   6658  GIDSRGTINISEQVKKMMGYSRAVPSGVCKGLTLRQMCEPFAEEARDCLTILATLRVYSRLALKMAK  6858

Range 2: 6442 to 6639 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.2 bits(160) 0.0 33/66(50%) 0/66(0%) Plus/Plus
Query       14  LMGQYARRGEIRAVIEELVLARAELSEDTSSEGYDRTMYLNTLFGYIALVGTSKKATHYGEVDIVG  211
                +M   +R  +IR+ I EL+ A      D    G+DR MY  TLFGYIAL GTS KA HY  VDI+G
Subject   6442  VMENISRMAKIRSNISELLCAGVTFVTDARETGFDRPMYFRTLFGYIALTGTSAKAQHYENVDIIG  6639

Grapevine virus E, complete genome

Sequence ID: Length: 7564 Number of Matches: 2

Range 1: 6727 to 6915 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.4 bits(132) 0.0 30/63(48%) 0/63(0%) Plus/Plus
Query      254  INVASMVTRMRTLSAAVSEGPVKGATLRQMCEPFAQNAYDFLVVMAELGTYTQLASKMTRSAN  442
                + VA +V  M  +  + +E P+   TLRQMC PFA  AY FL   A    YTQLA KMTR  N
Subject   6727  LKVAQVVMYMIAVRNSTTEPPLANLTLRQMCTPFAPEAYLFLRTAASAKIYTQLARKMTRIGN  6915

Range 2: 6598 to 6657 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.8 bits(50) 0.0 11/20(55%) 0/20(0%) Plus/Plus
Query      131  LNTLFGYIALVGTSKKATHY  190
                L  LFG IA+VGTS    +Y
Subject   6598  LANLFGNIAIVGTSAAVINY  6657