Queries
Nucleotide Sequence (315 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
247.1 | 1304.8 | 24% | 5.427e-64 | 97% | HQ130295.1 | |
247.1 | 1304.8 | 24% | 5.427e-64 | 97% | HQ130300.1 | |
247.1 | 1304.8 | 24% | 5.427e-64 | 97% | HQ130303.1 | |
247.1 | 1304.8 | 24% | 5.427e-64 | 97% | HQ130304.1 | |
247.1 | 1304.8 | 24% | 5.427e-64 | 97% | HQ130306.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 6 6 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130295.1 Length: 4711 Number of Matches: 8
Range 1: 2110 to 2412 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
247.1 bits(533) | 0.0 | 100/101(99%) | 0/101(0%) | Minus/Plus |
Query 6 GEYDSGHDTTFRTLLYCKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSLL 308 GEYDSGHDTTFRTLLYCKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHS+L Subject 2110 GEYDSGHDTTFRTLLYCKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVL 2412
Range 2: 2111 to 2416 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
240.3 bits(518) | 0.0 | 99/102(97%) | 0/102(0%) | Plus/Minus |
Query 2 DSVGSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYSRVEYEKLYHGHYHIP 307 ++V SEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYSRVEYEKLYHGHYHIP Subject 2111 EAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYSRVEYEKLYHGHYHIP 2416
Range 3: 2111 to 2410 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
236.1 bits(509) | 0.0 | 100/100(100%) | 0/100(0%) | Minus/Plus |
Query 8 GNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPY 307 GNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPY Subject 2111 GNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPY 2410
Range 4: 2110 to 2412 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
221.0 bits(476) | 0.0 | 100/101(99%) | 0/101(0%) | Plus/Minus |
Query 6 Q*GVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFP 308 Q GVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFP Subject 2110 QYGVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFP 2412
Range 5: 2112 to 2417 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
189.4 bits(407) | 0.0 | 100/102(98%) | 0/102(0%) | Minus/Plus |
Query 1 GI**WP*YNFSYSTLL*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GIXXXXXXXXX*RRKFSQRILP*LSTASRRGSLPTES 306 GI**WP*YNFSYSTLL*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSL T S Subject 2112 GI**WP*YNFSYSTLL*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSLRTAS 2417
Range 6: 2271 to 2411 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.0 bits(225) | 0.0 | 46/47(98%) | 0/47(0%) | Plus/Minus |
Query 7 SRE*TSSGRRA*LGQYTLAEFSSL*VE*WWCE*NTS*RIAQCWLETH 147 S E*TSSGRRA*LGQYTLAEFSSL*VE*WWCE*NTS*RIAQCWLETH Subject 2271 STE*TSSGRRA*LGQYTLAEFSSL*VE*WWCE*NTS*RIAQCWLETH 2411
Grapevine leafroll associated virus 3 isolate 6 18 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130300.1 Length: 4711 Number of Matches: 8
Range 1: 2110 to 2412 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
247.1 bits(533) | 0.0 | 100/101(99%) | 0/101(0%) | Minus/Plus |
Query 6 GEYDSGHDTTFRTLLYCKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSLL 308 GEYDSGHDTTFRTLLYCKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHS+L Subject 2110 GEYDSGHDTTFRTLLYCKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVL 2412
Range 2: 2111 to 2416 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
240.3 bits(518) | 0.0 | 99/102(97%) | 0/102(0%) | Plus/Minus |
Query 2 DSVGSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYSRVEYEKLYHGHYHIP 307 ++V SEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYSRVEYEKLYHGHYHIP Subject 2111 EAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYSRVEYEKLYHGHYHIP 2416
Range 3: 2111 to 2410 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
236.1 bits(509) | 0.0 | 100/100(100%) | 0/100(0%) | Minus/Plus |
Query 8 GNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPY 307 GNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPY Subject 2111 GNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPY 2410
Range 4: 2110 to 2412 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
221.0 bits(476) | 0.0 | 100/101(99%) | 0/101(0%) | Plus/Minus |
Query 6 Q*GVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFP 308 Q GVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFP Subject 2110 QYGVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFP 2412
Range 5: 2112 to 2417 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
189.4 bits(407) | 0.0 | 100/102(98%) | 0/102(0%) | Minus/Plus |
Query 1 GI**WP*YNFSYSTLL*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GIXXXXXXXXX*RRKFSQRILP*LSTASRRGSLPTES 306 GI**WP*YNFSYSTLL*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSL T S Subject 2112 GI**WP*YNFSYSTLL*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSLRTAS 2417
Range 6: 2271 to 2411 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.0 bits(225) | 0.0 | 46/47(98%) | 0/47(0%) | Plus/Minus |
Query 7 SRE*TSSGRRA*LGQYTLAEFSSL*VE*WWCE*NTS*RIAQCWLETH 147 S E*TSSGRRA*LGQYTLAEFSSL*VE*WWCE*NTS*RIAQCWLETH Subject 2271 STE*TSSGRRA*LGQYTLAEFSSL*VE*WWCE*NTS*RIAQCWLETH 2411
Grapevine leafroll associated virus 3 isolate 6 114 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130303.1 Length: 4711 Number of Matches: 8
Range 1: 2110 to 2412 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
247.1 bits(533) | 0.0 | 100/101(99%) | 0/101(0%) | Minus/Plus |
Query 6 GEYDSGHDTTFRTLLYCKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSLL 308 GEYDSGHDTTFRTLLYCKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHS+L Subject 2110 GEYDSGHDTTFRTLLYCKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVL 2412
Range 2: 2111 to 2416 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
240.3 bits(518) | 0.0 | 99/102(97%) | 0/102(0%) | Plus/Minus |
Query 2 DSVGSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYSRVEYEKLYHGHYHIP 307 ++V SEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYSRVEYEKLYHGHYHIP Subject 2111 EAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYSRVEYEKLYHGHYHIP 2416
Range 3: 2111 to 2410 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
236.1 bits(509) | 0.0 | 100/100(100%) | 0/100(0%) | Minus/Plus |
Query 8 GNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPY 307 GNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPY Subject 2111 GNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPY 2410
Range 4: 2110 to 2412 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
221.0 bits(476) | 0.0 | 100/101(99%) | 0/101(0%) | Plus/Minus |
Query 6 Q*GVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFP 308 Q GVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFP Subject 2110 QYGVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFP 2412
Range 5: 2112 to 2417 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
189.4 bits(407) | 0.0 | 100/102(98%) | 0/102(0%) | Minus/Plus |
Query 1 GI**WP*YNFSYSTLL*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GIXXXXXXXXX*RRKFSQRILP*LSTASRRGSLPTES 306 GI**WP*YNFSYSTLL*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSL T S Subject 2112 GI**WP*YNFSYSTLL*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSLRTAS 2417
Range 6: 2271 to 2411 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.0 bits(225) | 0.0 | 46/47(98%) | 0/47(0%) | Plus/Minus |
Query 7 SRE*TSSGRRA*LGQYTLAEFSSL*VE*WWCE*NTS*RIAQCWLETH 147 S E*TSSGRRA*LGQYTLAEFSSL*VE*WWCE*NTS*RIAQCWLETH Subject 2271 STE*TSSGRRA*LGQYTLAEFSSL*VE*WWCE*NTS*RIAQCWLETH 2411
Grapevine leafroll associated virus 3 isolate 6 115 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130304.1 Length: 4711 Number of Matches: 8
Range 1: 2110 to 2412 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
247.1 bits(533) | 0.0 | 100/101(99%) | 0/101(0%) | Minus/Plus |
Query 6 GEYDSGHDTTFRTLLYCKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSLL 308 GEYDSGHDTTFRTLLYCKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHS+L Subject 2110 GEYDSGHDTTFRTLLYCKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVL 2412
Range 2: 2111 to 2416 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
240.3 bits(518) | 0.0 | 99/102(97%) | 0/102(0%) | Plus/Minus |
Query 2 DSVGSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYSRVEYEKLYHGHYHIP 307 ++V SEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYSRVEYEKLYHGHYHIP Subject 2111 EAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYSRVEYEKLYHGHYHIP 2416
Range 3: 2111 to 2410 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
236.1 bits(509) | 0.0 | 100/100(100%) | 0/100(0%) | Minus/Plus |
Query 8 GNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPY 307 GNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPY Subject 2111 GNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPY 2410
Range 4: 2110 to 2412 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
221.0 bits(476) | 0.0 | 100/101(99%) | 0/101(0%) | Plus/Minus |
Query 6 Q*GVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFP 308 Q GVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFP Subject 2110 QYGVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFP 2412
Range 5: 2112 to 2417 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
189.4 bits(407) | 0.0 | 100/102(98%) | 0/102(0%) | Minus/Plus |
Query 1 GI**WP*YNFSYSTLL*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GIXXXXXXXXX*RRKFSQRILP*LSTASRRGSLPTES 306 GI**WP*YNFSYSTLL*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSL T S Subject 2112 GI**WP*YNFSYSTLL*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSLRTAS 2417
Range 6: 2271 to 2411 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.0 bits(225) | 0.0 | 46/47(98%) | 0/47(0%) | Plus/Minus |
Query 7 SRE*TSSGRRA*LGQYTLAEFSSL*VE*WWCE*NTS*RIAQCWLETH 147 S E*TSSGRRA*LGQYTLAEFSSL*VE*WWCE*NTS*RIAQCWLETH Subject 2271 STE*TSSGRRA*LGQYTLAEFSSL*VE*WWCE*NTS*RIAQCWLETH 2411
Grapevine leafroll associated virus 3 isolate 6 122 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130306.1 Length: 4711 Number of Matches: 8
Range 1: 2110 to 2412 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
247.1 bits(533) | 0.0 | 100/101(99%) | 0/101(0%) | Minus/Plus |
Query 6 GEYDSGHDTTFRTLLYCKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSLL 308 GEYDSGHDTTFRTLLYCKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHS+L Subject 2110 GEYDSGHDTTFRTLLYCKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVL 2412
Range 2: 2111 to 2416 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
240.3 bits(518) | 0.0 | 99/102(97%) | 0/102(0%) | Plus/Minus |
Query 2 DSVGSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYSRVEYEKLYHGHYHIP 307 ++V SEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYSRVEYEKLYHGHYHIP Subject 2111 EAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYSRVEYEKLYHGHYHIP 2416
Range 3: 2111 to 2410 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
236.1 bits(509) | 0.0 | 100/100(100%) | 0/100(0%) | Minus/Plus |
Query 8 GNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPY 307 GNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPY Subject 2111 GNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPY 2410
Range 4: 2110 to 2412 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
221.0 bits(476) | 0.0 | 100/101(99%) | 0/101(0%) | Plus/Minus |
Query 6 Q*GVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFP 308 Q GVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFP Subject 2110 QYGVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFP 2412
Range 5: 2112 to 2417 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
189.4 bits(407) | 0.0 | 100/102(98%) | 0/102(0%) | Minus/Plus |
Query 1 GI**WP*YNFSYSTLL*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GIXXXXXXXXX*RRKFSQRILP*LSTASRRGSLPTES 306 GI**WP*YNFSYSTLL*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSL T S Subject 2112 GI**WP*YNFSYSTLL*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSLRTAS 2417
Range 6: 2271 to 2411 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.0 bits(225) | 0.0 | 46/47(98%) | 0/47(0%) | Plus/Minus |
Query 7 SRE*TSSGRRA*LGQYTLAEFSSL*VE*WWCE*NTS*RIAQCWLETH 147 S E*TSSGRRA*LGQYTLAEFSSL*VE*WWCE*NTS*RIAQCWLETH Subject 2271 STE*TSSGRRA*LGQYTLAEFSSL*VE*WWCE*NTS*RIAQCWLETH 2411
Nucleotide Sequence (1204 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
882.2 | 4668.4 | 31% | 0 | 92% | JX559645.1 | |
881.3 | 4636.7 | 31% | 0 | 92% | HQ130308.1 | |
880.8 | 4667.4 | 31% | 0 | 92% | HQ130315.1 | |
880.8 | 4667.4 | 31% | 0 | 92% | HQ130316.1 | |
880.4 | 4676.6 | 31% | 0 | 92% | KX756669.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 16
Range 1: 17223 to 18425 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
882.2 bits(1919) | 0.0 | 390/401(97%) | 0/401(0%) | Minus/Minus |
Query 2 VYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEESLPINSSQTFPFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQLTISTANKHAQISSDNCNPFEDLTLAEQHNIFIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVCLLLQLRPVRPELASCIC*CIDRLSIQDIFCFPSFHDTLRITPST**PPEHLPNV*SNL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQXXXXXLRKPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKYT*LSQQEPKHTQHN 1204 VYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEESLPINSSQTFPFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQLTISTANKHAQISSDNCNPFE+LTLAEQHNIFIVLRNKASRATS*RSRNLKRTYY *LDDSFVVCLLLQLRPVRPELASCIC*CIDRLSIQDIFCFPSFHDTLRITPST**PPEHLPNV*+NL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQSSL**LRKPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKYT*LSQ+ + +N Subject 17223 VYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEESLPINSSQTFPFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQLTISTANKHAQISSDNCNPFENLTLAEQHNIFIVLRNKASRATS*RSRNLKRTYYR*LDDSFVVCLLLQLRPVRPELASCIC*CIDRLSIQDIFCFPSFHDTLRITPST**PPEHLPNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQSSL**LRKPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKYT*LSQRRIHNHHYN 18425
Range 2: 17249 to 17998 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
539.9 bits(1172) | 0.0 | 245/250(98%) | 0/250(0%) | Plus/Plus |
Query 28 VAKVKYILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEVNXXXXXXXXXXXXXLHRTILIDSIDSAFAYGQVGCLVGIARGLIKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEGADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL*KCYVVQPVSNLQTGYNYRYLFAH 777 VAKVKYILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEVNVVKAYVATTATT LHRTILIDSIDSAFAY QVGCLVGIARGL+KHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVE ADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL*KCYVVQPVSN QTGYNYRYLFAH Subject 17249 VAKVKYILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEVNVVKAYVATTATTELHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEEADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL*KCYVVQPVSNFQTGYNYRYLFAH 17998
Range 3: 18032 to 18424 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
278.3 bits(601) | 0.0 | 129/131(98%) | 0/131(0%) | Plus/Plus |
Query 811 EGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*KKGRSGNY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKADSDIILV*YNK 1203 EGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*K GRSGNY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRK DSDIILV*YNK Subject 18032 EGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*KTGRSGNY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*YNK 18424
Range 4: 17904 to 18425 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
363.1 bits(786) | 0.0 | 173/174(99%) | 0/174(0%) | Plus/Plus |
Query 683 *RFVAEHYKNVMLFSQCQIFKRVTIIATYLRMFVSGANC*LL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRKREGLGTINR*RLFNKFEINKSKKNEXXXXXXXXXXXXCRIGYISR*DD*TLPHGLIL*YL*N*SVKPIVILY*YSIIN 1204 *RFVAEHYKNVMLFSQCQIFKRVTIIATYLRMFVSGANC*LL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRKREGLGTINR*RLFNKFEINKSKKNEIIRLVFLFVFRFCRIGYISR*DD*TLPHGLIL*YL*N*SVK IVILY*YSIIN Subject 17904 *RFVAEHYKNVMLFSQCQIFKRVTIIATYLRMFVSGANC*LL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRKREGLGTINR*RLFNKFEINKSKKNEIIRLVFLFVFRFCRIGYISR*DD*TLPHGLIL*YL*N*SVKSIVILY*YSIIN 18425
Range 5: 17577 to 17843 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
209.6 bits(451) | 0.0 | 86/89(97%) | 0/89(0%) | Plus/Plus |
Query 356 CIEQFSLTV*TPPSLMAKWGVWWA*LEV*LNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*AINALTNT*C*LRPDWPQLKEQTYYER 622 CIEQFSLTV*TPPSLM KWGVWWA*LEV LNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*AINALTNT*C*LRPDWPQLK+QTYYER Subject 17577 CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*AINALTNT*C*LRPDWPQLKKQTYYER 17843
Range 6: 17223 to 17507 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
201.3 bits(433) | 0.0 | 87/95(92%) | 0/95(0%) | Plus/Plus |
Query 2 IVLGVFGFLLRKLSIFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQ 286 I++ + LRKLSIFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQ Subject 17223 IIVVIVDPTLRKLSIFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQ 17507
Range 7: 17249 to 18208 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
639.8 bits(1390) | 0.0 | 314/320(98%) | 0/320(0%) | Minus/Minus |
Query 28 VPRPSLFLHMLIRAYK**LXXXXXXXXXXXTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNN*QLAPLTNMRK*VAIIVTRLKI*HWLNNITFL*CSATKRQEQHPSDPEI*RELITTD*MIRS*YVCSFNCGQSGLS*HHVFVSALIA*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFNQTSSYAHQTPHLAISEGGVYTVNENCSMQHSRRCSSYVSLHDVNLSLRIVYRCPXXXXXXXXXXXXXXVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNILNFRN 987 VPRPS FLHMLIRAYK**LINIPINVTPINTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNN*QLAPLTNMRK*VAIIVTRLKI*HWLNNITFL*CSATKRQEQHPSDPEI*RELIT D*MIRS*YVC FNCGQSGLS*HHVFVSALIA*VSKISFASPLSTTHFE*LHRLDDLQNIFRMF QTSSYAHQTPHL ISEGGVYTVNENCSMQ SRRCSSYVSLHDVNLSLRIVYRCPARRIINAIIRVNQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNILNFRN Subject 17249 VPRPSRFLHMLIRAYK**LINIPINVTPINTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNN*QLAPLTNMRK*VAIIVTRLKI*HWLNNITFL*CSATKRQEQHPSDPEI*RELITAD*MIRS*YVCFFNCGQSGLS*HHVFVSALIA*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFKQTSSYAHQTPHLVISEGGVYTVNENCSMQLSRRCSSYVSLHDVNLSLRIVYRCPARRIINAIIRVNQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNILNFRN 18208
Range 8: 18278 to 18424 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.5 bits(226) | 0.0 | 48/49(98%) | 0/49(0%) | Minus/Minus |
Query 1057 FIILY*YNITIGFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT 1203 FIILY*YNITI FTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT Subject 18278 FIILY*YNITIDFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT 18424
Range 9: 18082 to 18423 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
262.7 bits(567) | 0.0 | 112/114(98%) | 0/114(0%) | Minus/Minus |
Query 861 LLYYTNIISLSALRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**FPDLPFFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR 1202 LLYYTNIISLS LRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**FPDLP FYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR Subject 18082 LLYYTNIISLSTLRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**FPDLPVFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR 18423
Range 10: 17230 to 17520 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
216.4 bits(466) | 0.0 | 92/97(95%) | 0/97(0%) | Minus/Minus |
Query 9 GSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKIYLTFATRTQTHP 299 GSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKIYLTFAT P Subject 17230 GSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKIYLTFATSDPQSP 17520
Range 11: 17836 to 18015 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.4 bits(274) | 0.0 | 59/60(98%) | 0/60(0%) | Minus/Minus |
Query 615 *HR*QTCANK*R*L*PV*RFDTG*TT*HFYSAPQQSVKSNILAIPKFEENLLPLTR*FVR 794 *HR*QTCANK*R*L*PV*+FDTG*TT*HFYSAPQQSVKSNILAIPKFEENLLPLTR*FVR Subject 17836 *HR*QTCANK*R*L*PV*KFDTG*TT*HFYSAPQQSVKSNILAIPKFEENLLPLTR*FVR 18015
Range 12: 17587 to 17796 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
117.9 bits(251) | 0.0 | 68/70(97%) | 0/70(0%) | Minus/Minus |
Query 366 VSIMYLLVH*SXXXXXXXXXXXXXRHTSNNSIDLMTSRTSSECLIKPLAMPTKHPTWP*AKAESILSMRI 575 VSIMYLLVH*SLKYPRYLLLPLFPRHTSNNSIDLMTSRTSSECL KPLAMPTKHPTW *AKAESILSMRI Subject 17587 VSIMYLLVH*SLKYPRYLLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRI 17796
Range 13: 17251 to 17796 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
373.6 bits(809) | 0.0 | 179/182(98%) | 0/182(0%) | Plus/Plus |
Query 30 CES*VYFVWGESRIGVRRFLEASLXXXXXXXXXXXALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGLRSYYSDDCAA*NNSH*QYRLRLRLWPSGVFGGHS*RFD*TFGRCSGGHQVDGVIRSVSWKEGKQKISWILKRSMH*QIHDAN 575 CES*VYFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGLRSYYSDD AA*NNSH*QYRLRLRL PSGVFGGHS*RF *TFGRCSGGHQVDGVIRSVSWKEGKQKISWILKRSMH*QIHDAN Subject 17251 CES*VYFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGLRSYYSDD*AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFGRCSGGHQVDGVIRSVSWKEGKQKISWILKRSMH*QIHDAN 17796
Range 14: 18022 to 18282 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
187.1 bits(402) | 0.0 | 86/87(99%) | 0/87(0%) | Plus/Plus |
Query 801 SCCRRR*GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKGKVWELLIGKDSSINLK*TKVRKMK*LG*S 1061 SCCRRR*GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVE GKVWELLIGKDSSINLK*TKVRKMK*LG*S Subject 18022 SCCRRR*GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVENGKVWELLIGKDSSINLK*TKVRKMK*LG*S 18282
Grapevine leafroll associated virus 3 isolate 7 3 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130308.1 Length: 4711 Number of Matches: 16
Range 1: 3492 to 4694 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
881.3 bits(1917) | 0.0 | 389/401(97%) | 0/401(0%) | Minus/Minus |
Query 2 VYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEESLPINSSQTFPFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQLTISTANKHAQISSDNCNPFEDLTLAEQHNIFIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVCLLLQLRPVRPELASCIC*CIDRLSIQDIFCFPSFHDTLRITPST**PPEHLPNV*SNL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQXXXXXLRKPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKYT*LSQQEPKHTQHN 1204 VYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEESLPINSSQTFPFSTYAN*S *IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQLTISTANKHAQISSDNCNPFE+LTLAEQHNIFIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVCLLLQLRPVRPELASCIC*CID LSIQDIFCFPSFHDTLRITPST**PPEHLPNV*+NL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQSSL**LRKPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKYT*LSQ+ + +N Subject 3492 VYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEESLPINSSQTFPFSTYAN*ST*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQLTISTANKHAQISSDNCNPFENLTLAEQHNIFIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVCLLLQLRPVRPELASCIC*CIDHLSIQDIFCFPSFHDTLRITPST**PPEHLPNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQSSL**LRKPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKYT*LSQRRIHNHHYN 4694
Range 2: 3518 to 4267 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
539.9 bits(1172) | 0.0 | 245/250(98%) | 0/250(0%) | Plus/Plus |
Query 28 VAKVKYILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEVNXXXXXXXXXXXXXLHRTILIDSIDSAFAYGQVGCLVGIARGLIKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEGADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL*KCYVVQPVSNLQTGYNYRYLFAH 777 VAKVKYILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEVNVVKAYVATTATT LHRTILIDSIDSAFAY QVGCLVGIARGL+KHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVE ADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL*KCYVVQPVSN QTGYNYRYLFAH Subject 3518 VAKVKYILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEVNVVKAYVATTATTELHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEEADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL*KCYVVQPVSNFQTGYNYRYLFAH 4267
Range 3: 4301 to 4693 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
274.2 bits(592) | 0.0 | 127/131(97%) | 0/131(0%) | Plus/Plus |
Query 811 EGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*KKGRSGNY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKADSDIILV*YNK 1203 EGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLF+CSN*HM*K+GRS NY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRK DSDIILV*YNK Subject 4301 EGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFMCSN*HM*KRGRSVNY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*YNK 4693
Range 4: 4173 to 4694 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
351.1 bits(760) | 0.0 | 170/174(98%) | 0/174(0%) | Plus/Plus |
Query 683 *RFVAEHYKNVMLFSQCQIFKRVTIIATYLRMFVSGANC*LL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRKREGLGTINR*RLFNKFEINKSKKNEXXXXXXXXXXXXCRIGYISR*DD*TLPHGLIL*YL*N*SVKPIVILY*YSIIN 1204 *RFVAEHYKNVMLFSQCQIFKRVTIIATYLRMFVSGANC*LL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYL ALISICRK EGL TINR*RLFNKFEINKSKKNEIIRLVFLFVFRFCRIGYISR*DD*TLPHGLIL*YL*N*SVK IVILY*YSIIN Subject 4173 *RFVAEHYKNVMLFSQCQIFKRVTIIATYLRMFVSGANC*LL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLCALISICRKGEGL*TINR*RLFNKFEINKSKKNEIIRLVFLFVFRFCRIGYISR*DD*TLPHGLIL*YL*N*SVKSIVILY*YSIIN 4694
Range 5: 3846 to 4112 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
207.7 bits(447) | 0.0 | 85/89(96%) | 0/89(0%) | Plus/Plus |
Query 356 CIEQFSLTV*TPPSLMAKWGVWWA*LEV*LNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*AINALTNT*C*LRPDWPQLKEQTYYER 622 CIEQFSLTV*TPPSLM KWGVWWA*LEV LNIRKMFWRSSSRWSYSKCVVERGEAKDILDT* INALTNT*C*LRPDWPQLK+QTYYER Subject 3846 CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*VINALTNT*C*LRPDWPQLKKQTYYER 4112
Range 6: 3492 to 3776 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
201.3 bits(433) | 0.0 | 87/95(92%) | 0/95(0%) | Plus/Plus |
Query 2 IVLGVFGFLLRKLSIFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQ 286 I++ + LRKLSIFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQ Subject 3492 IIVVIVDPTLRKLSIFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQ 3776
Range 7: 3518 to 4477 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
633.4 bits(1376) | 0.0 | 312/320(98%) | 0/320(0%) | Minus/Minus |
Query 28 VPRPSLFLHMLIRAYK**LXXXXXXXXXXXTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNN*QLAPLTNMRK*VAIIVTRLKI*HWLNNITFL*CSATKRQEQHPSDPEI*RELITTD*MIRS*YVCSFNCGQSGLS*HHVFVSALIA*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFNQTSSYAHQTPHLAISEGGVYTVNENCSMQHSRRCSSYVSLHDVNLSLRIVYRCPXXXXXXXXXXXXXXVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNILNFRN 987 V RPS FLHMLIRA+K**LINIPINVTPINTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNN*QLAPLTNMRK*VAIIVTRLKI*HWLNNITFL*CSATKRQEQHPSDPEI*RELITTD*MIRS*YVC FNCGQSGLS*HHVFVSALI *VSKISFASPLSTTHFE*LHRLDDLQNIFRMF QTSSYAHQTPHL ISEGGVYTVNENCSMQ SRRCSSYVSLHDVNLSLRIVYRCPARRIINAIIRVNQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNILNFRN Subject 3518 VHRPSPFLHMLIRAHK**LINIPINVTPINTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNN*QLAPLTNMRK*VAIIVTRLKI*HWLNNITFL*CSATKRQEQHPSDPEI*RELITTD*MIRS*YVCFFNCGQSGLS*HHVFVSALIT*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFKQTSSYAHQTPHLVISEGGVYTVNENCSMQLSRRCSSYVSLHDVNLSLRIVYRCPARRIINAIIRVNQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNILNFRN 4477
Range 8: 4547 to 4693 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.5 bits(226) | 0.0 | 48/49(98%) | 0/49(0%) | Minus/Minus |
Query 1057 FIILY*YNITIGFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT 1203 FIILY*YNITI FTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT Subject 4547 FIILY*YNITIDFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT 4693
Range 9: 4351 to 4692 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
259.5 bits(560) | 0.0 | 111/114(97%) | 0/114(0%) | Minus/Minus |
Query 861 LLYYTNIISLSALRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**FPDLPFFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR 1202 LLYYTNIISLS LRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**F DLP FYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR Subject 4351 LLYYTNIISLSTLRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**FTDLPLFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR 4692
Range 10: 3499 to 3789 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
216.4 bits(466) | 0.0 | 92/97(95%) | 0/97(0%) | Minus/Minus |
Query 9 GSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKIYLTFATRTQTHP 299 GSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKIYLTFAT P Subject 3499 GSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKIYLTFATSDPQSP 3789
Range 11: 4105 to 4284 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.4 bits(274) | 0.0 | 59/60(98%) | 0/60(0%) | Minus/Minus |
Query 615 *HR*QTCANK*R*L*PV*RFDTG*TT*HFYSAPQQSVKSNILAIPKFEENLLPLTR*FVR 794 *HR*QTCANK*R*L*PV*+FDTG*TT*HFYSAPQQSVKSNILAIPKFEENLLPLTR*FVR Subject 4105 *HR*QTCANK*R*L*PV*KFDTG*TT*HFYSAPQQSVKSNILAIPKFEENLLPLTR*FVR 4284
Range 12: 3856 to 4065 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
117.9 bits(251) | 0.0 | 68/70(97%) | 0/70(0%) | Minus/Minus |
Query 366 VSIMYLLVH*SXXXXXXXXXXXXXRHTSNNSIDLMTSRTSSECLIKPLAMPTKHPTWP*AKAESILSMRI 575 VSIMYLLVH*SLKYPRYLLLPLFPRHTSNNSIDLMTSRTSSECL KPLAMPTKHPTW *AKAESILSMRI Subject 3856 VSIMYLLVH*SLKYPRYLLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRI 4065
Range 13: 3520 to 4065 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
369.5 bits(800) | 0.0 | 178/182(98%) | 0/182(0%) | Plus/Plus |
Query 30 CES*VYFVWGESRIGVRRFLEASLXXXXXXXXXXXALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGLRSYYSDDCAA*NNSH*QYRLRLRLWPSGVFGGHS*RFD*TFGRCSGGHQVDGVIRSVSWKEGKQKISWILKRSMH*QIHDAN 575 CES*VYFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGLRSYYSDD AA*NNSH*QYRLRLRL PSGVFGGHS*RF *TFGRCSGGHQVDGVIRSVSWKEGKQKISWILK SMH*QIHDAN Subject 3520 CES*VYFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGLRSYYSDD*AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFGRCSGGHQVDGVIRSVSWKEGKQKISWILK*SMH*QIHDAN 4065
Range 14: 4291 to 4551 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
181.6 bits(390) | 0.0 | 85/87(98%) | 0/87(0%) | Plus/Plus |
Query 801 SCCRRR*GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKGKVWELLIGKDSSINLK*TKVRKMK*LG*S 1061 SCCRRR*GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIY+L*LAYVEKGKV ELLIGKDSSINLK*TKVRKMK*LG*S Subject 4291 SCCRRR*GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYVL*LAYVEKGKVCELLIGKDSSINLK*TKVRKMK*LG*S 4551
Grapevine leafroll associated virus 3 isolate 8 6 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130315.1 Length: 4711 Number of Matches: 16
Range 1: 3492 to 4694 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
880.8 bits(1916) | 0.0 | 389/401(97%) | 0/401(0%) | Minus/Minus |
Query 2 VYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEESLPINSSQTFPFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQLTISTANKHAQISSDNCNPFEDLTLAEQHNIFIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVCLLLQLRPVRPELASCIC*CIDRLSIQDIFCFPSFHDTLRITPST**PPEHLPNV*SNL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQXXXXXLRKPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKYT*LSQQEPKHTQHN 1204 VYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEESLPINS QTFPFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQLTISTANKHAQISSDNCNPFE+LTLAEQHNIFIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVCLLLQLRPVRPELASCIC*CID LSIQDIFCFPSFHDTLRITPST**PPEHLPNV*+NL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQSSL**LRKPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKYT*LSQ+ + +N Subject 3492 VYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEESLPINSFQTFPFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQLTISTANKHAQISSDNCNPFENLTLAEQHNIFIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVCLLLQLRPVRPELASCIC*CIDHLSIQDIFCFPSFHDTLRITPST**PPEHLPNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQSSL**LRKPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKYT*LSQRRIHNHHYN 4694
Range 2: 3518 to 4267 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
540.4 bits(1173) | 0.0 | 245/250(98%) | 0/250(0%) | Plus/Plus |
Query 28 VAKVKYILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEVNXXXXXXXXXXXXXLHRTILIDSIDSAFAYGQVGCLVGIARGLIKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEGADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL*KCYVVQPVSNLQTGYNYRYLFAH 777 VAKVKYILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEVNVVKAYVATTATT LHRTILIDSIDSAFAY QVGCLVGIARGL+KHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEGADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL*KCYVV PVSN QTGYNYRYLFAH Subject 3518 VAKVKYILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEVNVVKAYVATTATTELHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEGADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL*KCYVVLPVSNFQTGYNYRYLFAH 4267
Range 3: 4301 to 4693 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
281.0 bits(607) | 0.0 | 130/131(99%) | 0/131(0%) | Plus/Plus |
Query 811 EGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*KKGRSGNY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKADSDIILV*YNK 1203 EGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*KKGRSGNY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRK DSDIILV*YNK Subject 4301 EGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*KKGRSGNY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*YNK 4693
Range 4: 4173 to 4694 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
357.1 bits(773) | 0.0 | 171/174(98%) | 0/174(0%) | Plus/Plus |
Query 683 *RFVAEHYKNVMLFSQCQIFKRVTIIATYLRMFVSGANC*LL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRKREGLGTINR*RLFNKFEINKSKKNEXXXXXXXXXXXXCRIGYISR*DD*TLPHGLIL*YL*N*SVKPIVILY*YSIIN 1204 *RFVAEHYKNVMLF QCQIFKRVTIIATYLRMFVSGANC*LL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRKREGL TINR*RLFNKFEINKSKKNEIIRLVFLFVFRFCRIGYISR*DD*TLPHGLIL*YL*N*SVK IVILY*YSIIN Subject 4173 *RFVAEHYKNVMLFCQCQIFKRVTIIATYLRMFVSGANC*LL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRKREGLETINR*RLFNKFEINKSKKNEIIRLVFLFVFRFCRIGYISR*DD*TLPHGLIL*YL*N*SVKSIVILY*YSIIN 4694
Range 5: 3846 to 4112 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
209.6 bits(451) | 0.0 | 86/89(97%) | 0/89(0%) | Plus/Plus |
Query 356 CIEQFSLTV*TPPSLMAKWGVWWA*LEV*LNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*AINALTNT*C*LRPDWPQLKEQTYYER 622 CIEQFSLTV*TPPSLM KWGVWWA*LEV LNIRKMFWRSSSRWSYSKCVVERGEAKDILDT* INALTNT*C*LRPDWPQLKEQTYYER Subject 3846 CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*VINALTNT*C*LRPDWPQLKEQTYYER 4112
Range 6: 3492 to 3776 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
201.3 bits(433) | 0.0 | 87/95(92%) | 0/95(0%) | Plus/Plus |
Query 2 IVLGVFGFLLRKLSIFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQ 286 I++ + LRKLSIFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQ Subject 3492 IIVVIVDPTLRKLSIFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQ 3776
Range 7: 3518 to 4477 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
639.4 bits(1389) | 0.0 | 314/320(98%) | 0/320(0%) | Minus/Minus |
Query 28 VPRPSLFLHMLIRAYK**LXXXXXXXXXXXTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNN*QLAPLTNMRK*VAIIVTRLKI*HWLNNITFL*CSATKRQEQHPSDPEI*RELITTD*MIRS*YVCSFNCGQSGLS*HHVFVSALIA*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFNQTSSYAHQTPHLAISEGGVYTVNENCSMQHSRRCSSYVSLHDVNLSLRIVYRCPXXXXXXXXXXXXXXVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNILNFRN 987 V RPSLFLHMLIRAYK**LINIPINVTPINTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNN*QLAPLTNMRK*VAIIVTRLKI*HW NNITFL*CSATKRQEQHPSDPEI*RELITTD*MIRS*YVCSFNCGQSGLS*HHVFVSALI *VSKISFASPLSTTHFE*LHRLDDLQNIFRMF QTSSYAHQTPHL ISEGGVYTVNENCSMQ SRRCSSYVSLHDVNLSLRIVYRCPARRIINAIIRVNQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNILNFRN Subject 3518 VSRPSLFLHMLIRAYK**LINIPINVTPINTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNN*QLAPLTNMRK*VAIIVTRLKI*HWQNNITFL*CSATKRQEQHPSDPEI*RELITTD*MIRS*YVCSFNCGQSGLS*HHVFVSALIT*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFKQTSSYAHQTPHLVISEGGVYTVNENCSMQLSRRCSSYVSLHDVNLSLRIVYRCPARRIINAIIRVNQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNILNFRN 4477
Range 8: 4547 to 4693 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.5 bits(226) | 0.0 | 48/49(98%) | 0/49(0%) | Minus/Minus |
Query 1057 FIILY*YNITIGFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT 1203 FIILY*YNITI FTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT Subject 4547 FIILY*YNITIDFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT 4693
Range 9: 4351 to 4692 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
265.9 bits(574) | 0.0 | 113/114(99%) | 0/114(0%) | Minus/Minus |
Query 861 LLYYTNIISLSALRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**FPDLPFFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR 1202 LLYYTNIISLS LRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**FPDLPFFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR Subject 4351 LLYYTNIISLSTLRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**FPDLPFFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR 4692
Range 10: 3499 to 3789 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
216.4 bits(466) | 0.0 | 92/97(95%) | 0/97(0%) | Minus/Minus |
Query 9 GSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKIYLTFATRTQTHP 299 GSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKIYLTFAT P Subject 3499 GSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKIYLTFATSDPQSP 3789
Range 11: 4105 to 4284 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
126.2 bits(269) | 0.0 | 58/60(97%) | 0/60(0%) | Minus/Minus |
Query 615 *HR*QTCANK*R*L*PV*RFDTG*TT*HFYSAPQQSVKSNILAIPKFEENLLPLTR*FVR 794 *HR*QTCANK*R*L*PV*+FDTG TT*HFYSAPQQSVKSNILAIPKFEENLLPLTR*FVR Subject 4105 *HR*QTCANK*R*L*PV*KFDTGRTT*HFYSAPQQSVKSNILAIPKFEENLLPLTR*FVR 4284
Range 12: 3856 to 4065 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
117.9 bits(251) | 0.0 | 68/70(97%) | 0/70(0%) | Minus/Minus |
Query 366 VSIMYLLVH*SXXXXXXXXXXXXXRHTSNNSIDLMTSRTSSECLIKPLAMPTKHPTWP*AKAESILSMRI 575 VSIMYLLVH*SLKYPRYLLLPLFPRHTSNNSIDLMTSRTSSECL KPLAMPTKHPTW *AKAESILSMRI Subject 3856 VSIMYLLVH*SLKYPRYLLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRI 4065
Range 13: 3520 to 4065 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
369.5 bits(800) | 0.0 | 178/182(98%) | 0/182(0%) | Plus/Plus |
Query 30 CES*VYFVWGESRIGVRRFLEASLXXXXXXXXXXXALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGLRSYYSDDCAA*NNSH*QYRLRLRLWPSGVFGGHS*RFD*TFGRCSGGHQVDGVIRSVSWKEGKQKISWILKRSMH*QIHDAN 575 CES*VYFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGLRSYYSDD AA*NNSH*QYRLRLRL PSGVFGGHS*RF *TFGRCSGGHQVDGVIRSVSWKEGKQKISWILK SMH*QIHDAN Subject 3520 CES*VYFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGLRSYYSDD*AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFGRCSGGHQVDGVIRSVSWKEGKQKISWILK*SMH*QIHDAN 4065
Range 14: 4291 to 4551 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
187.6 bits(403) | 0.0 | 86/87(99%) | 0/87(0%) | Plus/Plus |
Query 801 SCCRRR*GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKGKVWELLIGKDSSINLK*TKVRKMK*LG*S 1061 SCCRRR*GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKGKVW+LLIGKDSSINLK*TKVRKMK*LG*S Subject 4291 SCCRRR*GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKGKVWKLLIGKDSSINLK*TKVRKMK*LG*S 4551
Grapevine leafroll associated virus 3 isolate 8 8 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130316.1 Length: 4711 Number of Matches: 16
Range 1: 3492 to 4694 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
880.8 bits(1916) | 0.0 | 389/401(97%) | 0/401(0%) | Minus/Minus |
Query 2 VYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEESLPINSSQTFPFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQLTISTANKHAQISSDNCNPFEDLTLAEQHNIFIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVCLLLQLRPVRPELASCIC*CIDRLSIQDIFCFPSFHDTLRITPST**PPEHLPNV*SNL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQXXXXXLRKPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKYT*LSQQEPKHTQHN 1204 VYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEESLPINS QTFPFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQLTISTANKHAQISSDNCNPFE+LTLAEQHNIFIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVCLLLQLRPVRPELASCIC*CID LSIQDIFCFPSFHDTLRITPST**PPEHLPNV*+NL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQSSL**LRKPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKYT*LSQ+ + +N Subject 3492 VYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEESLPINSFQTFPFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQLTISTANKHAQISSDNCNPFENLTLAEQHNIFIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVCLLLQLRPVRPELASCIC*CIDHLSIQDIFCFPSFHDTLRITPST**PPEHLPNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQSSL**LRKPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKYT*LSQRRIHNHHYN 4694
Range 2: 3518 to 4267 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
540.4 bits(1173) | 0.0 | 245/250(98%) | 0/250(0%) | Plus/Plus |
Query 28 VAKVKYILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEVNXXXXXXXXXXXXXLHRTILIDSIDSAFAYGQVGCLVGIARGLIKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEGADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL*KCYVVQPVSNLQTGYNYRYLFAH 777 VAKVKYILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEVNVVKAYVATTATT LHRTILIDSIDSAFAY QVGCLVGIARGL+KHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEGADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL*KCYVV PVSN QTGYNYRYLFAH Subject 3518 VAKVKYILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEVNVVKAYVATTATTELHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEGADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL*KCYVVLPVSNFQTGYNYRYLFAH 4267
Range 3: 4301 to 4693 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
281.0 bits(607) | 0.0 | 130/131(99%) | 0/131(0%) | Plus/Plus |
Query 811 EGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*KKGRSGNY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKADSDIILV*YNK 1203 EGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*KKGRSGNY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRK DSDIILV*YNK Subject 4301 EGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*KKGRSGNY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*YNK 4693
Range 4: 4173 to 4694 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
357.1 bits(773) | 0.0 | 171/174(98%) | 0/174(0%) | Plus/Plus |
Query 683 *RFVAEHYKNVMLFSQCQIFKRVTIIATYLRMFVSGANC*LL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRKREGLGTINR*RLFNKFEINKSKKNEXXXXXXXXXXXXCRIGYISR*DD*TLPHGLIL*YL*N*SVKPIVILY*YSIIN 1204 *RFVAEHYKNVMLF QCQIFKRVTIIATYLRMFVSGANC*LL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRKREGL TINR*RLFNKFEINKSKKNEIIRLVFLFVFRFCRIGYISR*DD*TLPHGLIL*YL*N*SVK IVILY*YSIIN Subject 4173 *RFVAEHYKNVMLFCQCQIFKRVTIIATYLRMFVSGANC*LL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRKREGLETINR*RLFNKFEINKSKKNEIIRLVFLFVFRFCRIGYISR*DD*TLPHGLIL*YL*N*SVKSIVILY*YSIIN 4694
Range 5: 3846 to 4112 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
209.6 bits(451) | 0.0 | 86/89(97%) | 0/89(0%) | Plus/Plus |
Query 356 CIEQFSLTV*TPPSLMAKWGVWWA*LEV*LNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*AINALTNT*C*LRPDWPQLKEQTYYER 622 CIEQFSLTV*TPPSLM KWGVWWA*LEV LNIRKMFWRSSSRWSYSKCVVERGEAKDILDT* INALTNT*C*LRPDWPQLKEQTYYER Subject 3846 CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*VINALTNT*C*LRPDWPQLKEQTYYER 4112
Range 6: 3492 to 3776 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
201.3 bits(433) | 0.0 | 87/95(92%) | 0/95(0%) | Plus/Plus |
Query 2 IVLGVFGFLLRKLSIFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQ 286 I++ + LRKLSIFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQ Subject 3492 IIVVIVDPTLRKLSIFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQ 3776
Range 7: 3518 to 4477 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
639.4 bits(1389) | 0.0 | 314/320(98%) | 0/320(0%) | Minus/Minus |
Query 28 VPRPSLFLHMLIRAYK**LXXXXXXXXXXXTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNN*QLAPLTNMRK*VAIIVTRLKI*HWLNNITFL*CSATKRQEQHPSDPEI*RELITTD*MIRS*YVCSFNCGQSGLS*HHVFVSALIA*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFNQTSSYAHQTPHLAISEGGVYTVNENCSMQHSRRCSSYVSLHDVNLSLRIVYRCPXXXXXXXXXXXXXXVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNILNFRN 987 V RPSLFLHMLIRAYK**LINIPINVTPINTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNN*QLAPLTNMRK*VAIIVTRLKI*HW NNITFL*CSATKRQEQHPSDPEI*RELITTD*MIRS*YVCSFNCGQSGLS*HHVFVSALI *VSKISFASPLSTTHFE*LHRLDDLQNIFRMF QTSSYAHQTPHL ISEGGVYTVNENCSMQ SRRCSSYVSLHDVNLSLRIVYRCPARRIINAIIRVNQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNILNFRN Subject 3518 VSRPSLFLHMLIRAYK**LINIPINVTPINTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNN*QLAPLTNMRK*VAIIVTRLKI*HWQNNITFL*CSATKRQEQHPSDPEI*RELITTD*MIRS*YVCSFNCGQSGLS*HHVFVSALIT*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFKQTSSYAHQTPHLVISEGGVYTVNENCSMQLSRRCSSYVSLHDVNLSLRIVYRCPARRIINAIIRVNQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNILNFRN 4477
Range 8: 4547 to 4693 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.5 bits(226) | 0.0 | 48/49(98%) | 0/49(0%) | Minus/Minus |
Query 1057 FIILY*YNITIGFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT 1203 FIILY*YNITI FTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT Subject 4547 FIILY*YNITIDFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT 4693
Range 9: 4351 to 4692 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
265.9 bits(574) | 0.0 | 113/114(99%) | 0/114(0%) | Minus/Minus |
Query 861 LLYYTNIISLSALRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**FPDLPFFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR 1202 LLYYTNIISLS LRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**FPDLPFFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR Subject 4351 LLYYTNIISLSTLRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**FPDLPFFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR 4692
Range 10: 3499 to 3789 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
216.4 bits(466) | 0.0 | 92/97(95%) | 0/97(0%) | Minus/Minus |
Query 9 GSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKIYLTFATRTQTHP 299 GSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKIYLTFAT P Subject 3499 GSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKIYLTFATSDPQSP 3789
Range 11: 4105 to 4284 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
126.2 bits(269) | 0.0 | 58/60(97%) | 0/60(0%) | Minus/Minus |
Query 615 *HR*QTCANK*R*L*PV*RFDTG*TT*HFYSAPQQSVKSNILAIPKFEENLLPLTR*FVR 794 *HR*QTCANK*R*L*PV*+FDTG TT*HFYSAPQQSVKSNILAIPKFEENLLPLTR*FVR Subject 4105 *HR*QTCANK*R*L*PV*KFDTGRTT*HFYSAPQQSVKSNILAIPKFEENLLPLTR*FVR 4284
Range 12: 3856 to 4065 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
117.9 bits(251) | 0.0 | 68/70(97%) | 0/70(0%) | Minus/Minus |
Query 366 VSIMYLLVH*SXXXXXXXXXXXXXRHTSNNSIDLMTSRTSSECLIKPLAMPTKHPTWP*AKAESILSMRI 575 VSIMYLLVH*SLKYPRYLLLPLFPRHTSNNSIDLMTSRTSSECL KPLAMPTKHPTW *AKAESILSMRI Subject 3856 VSIMYLLVH*SLKYPRYLLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRI 4065
Range 13: 3520 to 4065 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
369.5 bits(800) | 0.0 | 178/182(98%) | 0/182(0%) | Plus/Plus |
Query 30 CES*VYFVWGESRIGVRRFLEASLXXXXXXXXXXXALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGLRSYYSDDCAA*NNSH*QYRLRLRLWPSGVFGGHS*RFD*TFGRCSGGHQVDGVIRSVSWKEGKQKISWILKRSMH*QIHDAN 575 CES*VYFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGLRSYYSDD AA*NNSH*QYRLRLRL PSGVFGGHS*RF *TFGRCSGGHQVDGVIRSVSWKEGKQKISWILK SMH*QIHDAN Subject 3520 CES*VYFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGLRSYYSDD*AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFGRCSGGHQVDGVIRSVSWKEGKQKISWILK*SMH*QIHDAN 4065
Range 14: 4291 to 4551 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
187.6 bits(403) | 0.0 | 86/87(99%) | 0/87(0%) | Plus/Plus |
Query 801 SCCRRR*GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKGKVWELLIGKDSSINLK*TKVRKMK*LG*S 1061 SCCRRR*GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKGKVW+LLIGKDSSINLK*TKVRKMK*LG*S Subject 4291 SCCRRR*GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKGKVWKLLIGKDSSINLK*TKVRKMK*LG*S 4551
Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome
Sequence ID: KX756669.1 Length: 18313 Number of Matches: 16
Range 1: 17038 to 18240 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
880.4 bits(1915) | 0.0 | 390/401(97%) | 0/401(0%) | Minus/Minus |
Query 2 VYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEESLPINSSQTFPFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQLTISTANKHAQISSDNCNPFEDLTLAEQHNIFIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVCLLLQLRPVRPELASCIC*CIDRLSIQDIFCFPSFHDTLRITPST**PPEHLPNV*SNL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQXXXXXLRKPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKYT*LSQQEPKHTQHN 1204 VYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD* NYFIFLTFVYFKFIEESLPINSSQTFPFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQLTISTANKHAQISSDNCNPFE+LTLAEQHNIFIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVCLLLQLRPVRPELASCIC*CID LSIQDIFCFPSFHDTLRITPST**PPEHLPNV*SNL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQSSL**LRKPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKYT*LSQ+ + +N Subject 17038 VYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*LNYFIFLTFVYFKFIEESLPINSSQTFPFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQLTISTANKHAQISSDNCNPFENLTLAEQHNIFIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVCLLLQLRPVRPELASCIC*CIDHLSIQDIFCFPSFHDTLRITPST**PPEHLPNV*SNL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQSSL**LRKPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKYT*LSQRRIHNHHYN 18240
Range 2: 17064 to 17813 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
542.2 bits(1177) | 0.0 | 246/250(98%) | 0/250(0%) | Plus/Plus |
Query 28 VAKVKYILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEVNXXXXXXXXXXXXXLHRTILIDSIDSAFAYGQVGCLVGIARGLIKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEGADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL*KCYVVQPVSNLQTGYNYRYLFAH 777 VAKVKYILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEVNVVKAYVATTATT LHRTILIDSIDSAFAY QVGCLVGIARGLIKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEG DILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL*KCYVVQPVSN QTGYNYRYLFAH Subject 17064 VAKVKYILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEVNVVKAYVATTATTELHRTILIDSIDSAFAYDQVGCLVGIARGLIKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEGEDILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL*KCYVVQPVSNFQTGYNYRYLFAH 17813
Range 3: 17847 to 18239 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
279.7 bits(604) | 0.0 | 129/131(98%) | 0/131(0%) | Plus/Plus |
Query 811 EGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*KKGRSGNY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKADSDIILV*YNK 1203 EGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*K+GRSGNY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRK DSDIILV*YNK Subject 17847 EGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*KRGRSGNY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*YNK 18239
Range 4: 17719 to 18240 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
359.8 bits(779) | 0.0 | 171/174(98%) | 0/174(0%) | Plus/Plus |
Query 683 *RFVAEHYKNVMLFSQCQIFKRVTIIATYLRMFVSGANC*LL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRKREGLGTINR*RLFNKFEINKSKKNEXXXXXXXXXXXXCRIGYISR*DD*TLPHGLIL*YL*N*SVKPIVILY*YSIIN 1204 *RFVAEHYKNVMLFSQCQIFKRVTIIATYLRMFVSGANC*LL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRK EGLGTINR*RLFNKFEINKSKKNEII+LVFLFVFRFCRIGYISR*DD*TLPHGLIL*YL*N*SVK IVILY*YSIIN Subject 17719 *RFVAEHYKNVMLFSQCQIFKRVTIIATYLRMFVSGANC*LL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRKGEGLGTINR*RLFNKFEINKSKKNEIIKLVFLFVFRFCRIGYISR*DD*TLPHGLIL*YL*N*SVKSIVILY*YSIIN 18240
Range 5: 17392 to 17658 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
210.0 bits(452) | 0.0 | 86/89(97%) | 0/89(0%) | Plus/Plus |
Query 356 CIEQFSLTV*TPPSLMAKWGVWWA*LEV*LNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*AINALTNT*C*LRPDWPQLKEQTYYER 622 CIEQFSLTV*TPPSLM KWGVWWA*LEV*LNIRKMFWRSSSRWSYSKCVVERGEAKDILDT* INALTNT*C*LRPDWPQLKE+TYYER Subject 17392 CIEQFSLTV*TPPSLMTKWGVWWA*LEV*LNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*VINALTNT*C*LRPDWPQLKEKTYYER 17658
Range 6: 17038 to 17322 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
201.3 bits(433) | 0.0 | 87/95(92%) | 0/95(0%) | Plus/Plus |
Query 2 IVLGVFGFLLRKLSIFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQ 286 I++ + LRKLSIFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQ Subject 17038 IIVVIVDPTLRKLSIFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQ 17322
Range 7: 17064 to 18023 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
640.3 bits(1391) | 0.0 | 315/320(98%) | 0/320(0%) | Minus/Minus |
Query 28 VPRPSLFLHMLIRAYK**LXXXXXXXXXXXTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNN*QLAPLTNMRK*VAIIVTRLKI*HWLNNITFL*CSATKRQEQHPSDPEI*RELITTD*MIRS*YVCSFNCGQSGLS*HHVFVSALIA*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFNQTSSYAHQTPHLAISEGGVYTVNENCSMQHSRRCSSYVSLHDVNLSLRIVYRCPXXXXXXXXXXXXXXVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNILNFRN 987 VPRPS FLHMLIRAYK**LINIPINVTPINTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNN*QLAPLTNMRK*VAIIVTRLKI*HWLNNITFL*CSATKRQEQHPSDPEI*RELITTD*MIRS*YV SFNCGQSGLS*HHVFVSALI *VSKISFASPLSTTHFE*LHRLDDLQNIFRMFNQTSSYAHQTPHL ISEGGVYTVNENCSMQ SRRCSSYVSLHDVNLSLRIVYRCPARRIINAIIRVNQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNILNFRN Subject 17064 VPRPSPFLHMLIRAYK**LINIPINVTPINTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNN*QLAPLTNMRK*VAIIVTRLKI*HWLNNITFL*CSATKRQEQHPSDPEI*RELITTD*MIRS*YVFSFNCGQSGLS*HHVFVSALIT*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFNQTSSYAHQTPHLVISEGGVYTVNENCSMQLSRRCSSYVSLHDVNLSLRIVYRCPARRIINAIIRVNQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNILNFRN 18023
Range 8: 18093 to 18239 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.5 bits(226) | 0.0 | 48/49(98%) | 0/49(0%) | Minus/Minus |
Query 1057 FIILY*YNITIGFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT 1203 FIILY*YNITI FTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT Subject 18093 FIILY*YNITIDFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT 18239
Range 9: 17897 to 18238 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
263.2 bits(568) | 0.0 | 112/114(98%) | 0/114(0%) | Minus/Minus |
Query 861 LLYYTNIISLSALRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**FPDLPFFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR 1202 LLYYTNIISLS LRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**FPDLP FYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR Subject 17897 LLYYTNIISLSTLRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**FPDLPLFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR 18238
Range 10: 17045 to 17335 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
216.4 bits(466) | 0.0 | 92/97(95%) | 0/97(0%) | Minus/Minus |
Query 9 GSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKIYLTFATRTQTHP 299 GSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKIYLTFAT P Subject 17045 GSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKIYLTFATSDPQSP 17335
Range 11: 17651 to 17830 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.4 bits(274) | 0.0 | 59/60(98%) | 0/60(0%) | Minus/Minus |
Query 615 *HR*QTCANK*R*L*PV*RFDTG*TT*HFYSAPQQSVKSNILAIPKFEENLLPLTR*FVR 794 *HR*QTCANK*R*L*PV*+FDTG*TT*HFYSAPQQSVKSNILAIPKFEENLLPLTR*FVR Subject 17651 *HR*QTCANK*R*L*PV*KFDTG*TT*HFYSAPQQSVKSNILAIPKFEENLLPLTR*FVR 17830
Range 12: 17402 to 17611 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
120.7 bits(257) | 0.0 | 69/70(99%) | 0/70(0%) | Minus/Minus |
Query 366 VSIMYLLVH*SXXXXXXXXXXXXXRHTSNNSIDLMTSRTSSECLIKPLAMPTKHPTWP*AKAESILSMRI 575 VSIMYLLVH*SLKYPRYLLLPLFPRHTSNNSIDLMTSRTSSECLIKPLAMPTKHPTW *AKAESILSMRI Subject 17402 VSIMYLLVH*SLKYPRYLLLPLFPRHTSNNSIDLMTSRTSSECLIKPLAMPTKHPTWS*AKAESILSMRI 17611
Range 13: 17066 to 17611 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
373.1 bits(808) | 0.0 | 179/182(98%) | 0/182(0%) | Plus/Plus |
Query 30 CES*VYFVWGESRIGVRRFLEASLXXXXXXXXXXXALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGLRSYYSDDCAA*NNSH*QYRLRLRLWPSGVFGGHS*RFD*TFGRCSGGHQVDGVIRSVSWKEGKQKISWILKRSMH*QIHDAN 575 CES*VYFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGLRSYYSDD AA*NNSH*QYRLRLRL PSGVFGGHS*RFD*TFGRCSGGHQVDGVIRSVSWKEGKQKISWILK SMH*QIHDAN Subject 17066 CES*VYFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGLRSYYSDD*AA*NNSH*QYRLRLRL*PSGVFGGHS*RFD*TFGRCSGGHQVDGVIRSVSWKEGKQKISWILK*SMH*QIHDAN 17611
Range 14: 17837 to 18097 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
186.6 bits(401) | 0.0 | 86/87(99%) | 0/87(0%) | Plus/Plus |
Query 801 SCCRRR*GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKGKVWELLIGKDSSINLK*TKVRKMK*LG*S 1061 SCCRRR*GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKGKVWELLIGKDSSINLK*TKVRKMK*L *S Subject 17837 SCCRRR*GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKGKVWELLIGKDSSINLK*TKVRKMK*LS*S 18097
Nucleotide Sequence (626 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
484.5 | 2614.2 | 34% | 5.596e-135 | 96% | JX559645.1 | |
484.5 | 2614.2 | 34% | 5.596e-135 | 96% | GQ352631.1 | |
484.5 | 2614.2 | 34% | 5.596e-135 | 96% | GU983863.1 | |
479.9 | 2574.8 | 34% | 1.34e-133 | 93% | NC_004667.1 | |
479.9 | 2574.8 | 34% | 1.34e-133 | 93% | AF037268.2 |
Alignments
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 10
Range 1: 6744 to 7337 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
484.5 bits(1051) | 0.0 | 196/198(99%) | 0/198(0%) | Plus/Minus |
Query 31 KSGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVGVYFSYVISGSNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFI 624 +SGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHV VYFSYVISGSNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFI Subject 6744 QSGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVSVYFSYVISGSNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFI 7337
Range 2: 6744 to 7340 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
471.6 bits(1023) | 0.0 | 199/199(100%) | 0/199(0%) | Minus/Plus |
Query 28 YKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALS 624 YKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALS Subject 6744 YKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALS 7340
Range 3: 6742 to 7137 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
309.4 bits(669) | 0.0 | 131/132(99%) | 0/132(0%) | Minus/Plus |
Query 231 CIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQLEPLMT*LK*TPTCTCA*PSW 626 CIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQLEPLMT*LK*T TCTCA*PSW Subject 6742 CIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQLEPLMT*LK*TLTCTCA*PSW 7137
Range 4: 7168 to 7335 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
148.2 bits(317) | 0.0 | 56/56(100%) | 0/56(0%) | Minus/Plus |
Query 33 EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL 200 EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL Subject 7168 EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL 7335
Range 5: 6743 to 7021 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
218.3 bits(470) | 0.0 | 93/93(100%) | 0/93(0%) | Plus/Minus |
Query 347 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLY 625 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLY Subject 6743 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLY 7021
Range 6: 7073 to 7345 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
213.7 bits(460) | 0.0 | 89/91(98%) | 0/91(0%) | Plus/Minus |
Query 23 FGERAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI 295 F RAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI Subject 7073 FELRAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI 7345
Range 7: 6836 to 7345 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
353.4 bits(765) | 0.0 | 167/170(98%) | 0/170(0%) | Minus/Plus |
Query 23 FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWNH**RS*NKRRRVLVHDPXXXXXXXXXXXGKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRSFTK 532 FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWNH**RS*NKR RVLVHDPVGEVGYEEVVEGKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRS K Subject 6836 FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWNH**RS*NKR*RVLVHDPVGEVGYEEVVEGKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRSELK 7345
Range 8: 6743 to 6784 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
33.6 bits(67) | 0.0 | 14/14(100%) | 0/14(0%) | Minus/Plus |
Query 584 V*KGFGG*GVHDAS 625 V*KGFGG*GVHDAS Subject 6743 V*KGFGG*GVHDAS 6784
Range 9: 6742 to 7113 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
272.8 bits(589) | 0.0 | 123/124(99%) | 0/124(0%) | Plus/Minus |
Query 255 RRRLFQLRHQWFQLAFWTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTXXXXXXXXXXXXDASCTPHPPKPFYT 626 R+RLFQLRHQWFQLAFWTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLDASCTPHPPKPFYT Subject 6742 RQRLFQLRHQWFQLAFWTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLDASCTPHPPKPFYT 7113
Range 10: 7198 to 7344 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
108.7 bits(231) | 0.0 | 47/49(96%) | 0/49(0%) | Plus/Minus |
Query 24 LVKERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA 170 L ERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA Subject 7198 LSSERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA 7344
Grapevine leafroll associated virus 3 isolate 621, complete genome
Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 10
Range 1: 6744 to 7337 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
484.5 bits(1051) | 0.0 | 196/198(99%) | 0/198(0%) | Plus/Minus |
Query 31 KSGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVGVYFSYVISGSNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFI 624 +SGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHV VYFSYVISGSNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFI Subject 6744 QSGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVSVYFSYVISGSNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFI 7337
Range 2: 6744 to 7340 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
471.6 bits(1023) | 0.0 | 199/199(100%) | 0/199(0%) | Minus/Plus |
Query 28 YKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALS 624 YKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALS Subject 6744 YKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALS 7340
Range 3: 6742 to 7137 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
309.4 bits(669) | 0.0 | 131/132(99%) | 0/132(0%) | Minus/Plus |
Query 231 CIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQLEPLMT*LK*TPTCTCA*PSW 626 CIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQLEPLMT*LK*T TCTCA*PSW Subject 6742 CIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQLEPLMT*LK*TLTCTCA*PSW 7137
Range 4: 7168 to 7335 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
148.2 bits(317) | 0.0 | 56/56(100%) | 0/56(0%) | Minus/Plus |
Query 33 EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL 200 EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL Subject 7168 EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL 7335
Range 5: 6743 to 7021 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
218.3 bits(470) | 0.0 | 93/93(100%) | 0/93(0%) | Plus/Minus |
Query 347 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLY 625 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLY Subject 6743 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLY 7021
Range 6: 7073 to 7345 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
213.7 bits(460) | 0.0 | 89/91(98%) | 0/91(0%) | Plus/Minus |
Query 23 FGERAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI 295 F RAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI Subject 7073 FELRAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI 7345
Range 7: 6836 to 7345 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
353.4 bits(765) | 0.0 | 167/170(98%) | 0/170(0%) | Minus/Plus |
Query 23 FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWNH**RS*NKRRRVLVHDPXXXXXXXXXXXGKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRSFTK 532 FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWNH**RS*NKR RVLVHDPVGEVGYEEVVEGKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRS K Subject 6836 FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWNH**RS*NKR*RVLVHDPVGEVGYEEVVEGKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRSELK 7345
Range 8: 6743 to 6784 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
33.6 bits(67) | 0.0 | 14/14(100%) | 0/14(0%) | Minus/Plus |
Query 584 V*KGFGG*GVHDAS 625 V*KGFGG*GVHDAS Subject 6743 V*KGFGG*GVHDAS 6784
Range 9: 6742 to 7113 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
272.8 bits(589) | 0.0 | 123/124(99%) | 0/124(0%) | Plus/Minus |
Query 255 RRRLFQLRHQWFQLAFWTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTXXXXXXXXXXXXDASCTPHPPKPFYT 626 R+RLFQLRHQWFQLAFWTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLDASCTPHPPKPFYT Subject 6742 RQRLFQLRHQWFQLAFWTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLDASCTPHPPKPFYT 7113
Range 10: 7198 to 7344 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
108.7 bits(231) | 0.0 | 47/49(96%) | 0/49(0%) | Plus/Minus |
Query 24 LVKERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA 170 L ERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA Subject 7198 LSSERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA 7344
Grapevine leafroll associated virus 3 isolate WA MR, complete genome
Sequence ID: GU983863.1 Length: 18498 Number of Matches: 10
Range 1: 6744 to 7337 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
484.5 bits(1051) | 0.0 | 196/198(99%) | 0/198(0%) | Plus/Minus |
Query 31 KSGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVGVYFSYVISGSNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFI 624 +SGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHV VYFSYVISGSNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFI Subject 6744 QSGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVSVYFSYVISGSNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFI 7337
Range 2: 6744 to 7340 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
471.6 bits(1023) | 0.0 | 199/199(100%) | 0/199(0%) | Minus/Plus |
Query 28 YKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALS 624 YKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALS Subject 6744 YKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALS 7340
Range 3: 6742 to 7137 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
309.4 bits(669) | 0.0 | 131/132(99%) | 0/132(0%) | Minus/Plus |
Query 231 CIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQLEPLMT*LK*TPTCTCA*PSW 626 CIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQLEPLMT*LK*T TCTCA*PSW Subject 6742 CIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQLEPLMT*LK*TLTCTCA*PSW 7137
Range 4: 7168 to 7335 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
148.2 bits(317) | 0.0 | 56/56(100%) | 0/56(0%) | Minus/Plus |
Query 33 EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL 200 EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL Subject 7168 EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL 7335
Range 5: 6743 to 7021 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
218.3 bits(470) | 0.0 | 93/93(100%) | 0/93(0%) | Plus/Minus |
Query 347 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLY 625 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLY Subject 6743 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLY 7021
Range 6: 7073 to 7345 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
213.7 bits(460) | 0.0 | 89/91(98%) | 0/91(0%) | Plus/Minus |
Query 23 FGERAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI 295 F RAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI Subject 7073 FELRAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI 7345
Range 7: 6836 to 7345 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
353.4 bits(765) | 0.0 | 167/170(98%) | 0/170(0%) | Minus/Plus |
Query 23 FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWNH**RS*NKRRRVLVHDPXXXXXXXXXXXGKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRSFTK 532 FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWNH**RS*NKR RVLVHDPVGEVGYEEVVEGKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRS K Subject 6836 FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWNH**RS*NKR*RVLVHDPVGEVGYEEVVEGKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRSELK 7345
Range 8: 6743 to 6784 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
33.6 bits(67) | 0.0 | 14/14(100%) | 0/14(0%) | Minus/Plus |
Query 584 V*KGFGG*GVHDAS 625 V*KGFGG*GVHDAS Subject 6743 V*KGFGG*GVHDAS 6784
Range 9: 6742 to 7113 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
272.8 bits(589) | 0.0 | 123/124(99%) | 0/124(0%) | Plus/Minus |
Query 255 RRRLFQLRHQWFQLAFWTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTXXXXXXXXXXXXDASCTPHPPKPFYT 626 R+RLFQLRHQWFQLAFWTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLDASCTPHPPKPFYT Subject 6742 RQRLFQLRHQWFQLAFWTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLDASCTPHPPKPFYT 7113
Range 10: 7198 to 7344 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
108.7 bits(231) | 0.0 | 47/49(96%) | 0/49(0%) | Plus/Minus |
Query 24 LVKERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA 170 L ERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA Subject 7198 LSSERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA 7344
Grapevine leafroll associated virus 3, complete genome
Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 10
Range 1: 6165 to 6758 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
479.9 bits(1041) | 0.0 | 193/198(97%) | 0/198(0%) | Plus/Minus |
Query 31 KSGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVGVYFSYVISGSNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFI 624 +SGINQ*ACVSRQTNKYMRLFSE*GVIG LRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHV VYFSYVISGSNWPFGQRSYYWF+LTANDLFRVTLFRSPYGH*GQQVANI*RTPV FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFI Subject 6165 QSGINQ*ACVSRQTNKYMRLFSE*GVIGFLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVSVYFSYVISGSNWPFGQRSYYWFVLTANDLFRVTLFRSPYGH*GQQVANI*RTPVRFRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFI 6758
Range 2: 6165 to 6761 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
469.4 bits(1018) | 0.0 | 198/199(99%) | 0/199(0%) | Minus/Plus |
Query 28 YKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALS 624 YKRVLVDEV+MMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALS Subject 6165 YKRVLVDEVHMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALS 6761
Range 3: 6163 to 6558 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
303.5 bits(656) | 0.0 | 129/132(98%) | 0/132(0%) | Minus/Plus |
Query 231 CIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQLEPLMT*LK*TPTCTCA*PSW 626 CIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLN TGVR*MFATCCPQ*P*GERKSVTLKRSLAVR NQ**DRCPKGQLEPLMT*LK*T TCTCA*PSW Subject 6163 CIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNRTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRTNQ**DRCPKGQLEPLMT*LK*TLTCTCA*PSW 6558
Range 4: 6589 to 6756 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
146.8 bits(314) | 0.0 | 55/56(98%) | 0/56(0%) | Minus/Plus |
Query 33 EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL 200 EKEKKHQ**QCMKHREKHSVMWYCLGRR+PMTPYSLNNRIYLLVCRDTHAHWFMPL Subject 6589 EKEKKHQ**QCMKHREKHSVMWYCLGRRKPMTPYSLNNRIYLLVCRDTHAHWFMPL 6756
Range 5: 6164 to 6442 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
214.1 bits(461) | 0.0 | 92/93(99%) | 0/93(0%) | Plus/Minus |
Query 347 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLY 625 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIM TSSTKTLLY Subject 6164 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMCTSSTKTLLY 6442
Range 6: 6494 to 6766 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
213.7 bits(460) | 0.0 | 89/91(98%) | 0/91(0%) | Plus/Minus |
Query 23 FGERAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI 295 F RAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI Subject 6494 FELRAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI 6766
Range 7: 6257 to 6766 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
347.9 bits(753) | 0.0 | 164/170(96%) | 0/170(0%) | Minus/Plus |
Query 23 FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWNH**RS*NKRRRVLVHDPXXXXXXXXXXXGKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRSFTK 532 FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*I+QVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G TSSKIAVQKANWNH**RS*NKR RVLVHDPVGEVGYEEVVEGKRKRNTSDDSA*STGKNIQ*CGIV*DEE R*LPIH*TTAYTCWFVETHTLTGLCRS K Subject 6257 FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IVQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*GQTSSKIAVQKANWNH**RS*NKR*RVLVHDPVGEVGYEEVVEGKRKRNTSDDSA*STGKNIQ*CGIV*DEESR*LPIH*TTAYTCWFVETHTLTGLCRSELK 6766
Range 8: 6164 to 6205 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
31.8 bits(63) | 0.0 | 13/14(93%) | 0/14(0%) | Minus/Plus |
Query 584 V*KGFGG*GVHDAS 625 V*KGFGG*G HDAS Subject 6164 V*KGFGG*GAHDAS 6205
Range 9: 6163 to 6534 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
263.6 bits(569) | 0.0 | 120/124(97%) | 0/124(0%) | Plus/Minus |
Query 255 RRRLFQLRHQWFQLAFWTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTXXXXXXXXXXXXDASCTPHPPKPFYT 626 R+RLFQLRHQWFQLAFWTAILLLV PYR*RPFQGNTFPFPLRSLRTTSSKHLTDTC I*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLDASC PHPPKPFYT Subject 6163 RQRLFQLRHQWFQLAFWTAILLLVCPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCTI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLDASCAPHPPKPFYT 6534
Range 10: 6619 to 6765 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
104.2 bits(221) | 0.0 | 46/49(94%) | 0/49(0%) | Plus/Minus |
Query 24 LVKERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA 170 L ERHKPVSVCVSTNQQVYAVV**IGSHR SSS*TIPHH*MFFPVLHA Subject 6619 LSSERHKPVSVCVSTNQQVYAVV**IGSHRLSSS*TIPHH*MFFPVLHA 6765
Grapevine leafroll associated virus 3, complete genome
Sequence ID: AF037268.2 Length: 17919 Number of Matches: 10
Range 1: 6165 to 6758 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
479.9 bits(1041) | 0.0 | 193/198(97%) | 0/198(0%) | Plus/Minus |
Query 31 KSGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVGVYFSYVISGSNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFI 624 +SGINQ*ACVSRQTNKYMRLFSE*GVIG LRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHV VYFSYVISGSNWPFGQRSYYWF+LTANDLFRVTLFRSPYGH*GQQVANI*RTPV FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFI Subject 6165 QSGINQ*ACVSRQTNKYMRLFSE*GVIGFLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVSVYFSYVISGSNWPFGQRSYYWFVLTANDLFRVTLFRSPYGH*GQQVANI*RTPVRFRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFI 6758
Range 2: 6165 to 6761 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
469.4 bits(1018) | 0.0 | 198/199(99%) | 0/199(0%) | Minus/Plus |
Query 28 YKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALS 624 YKRVLVDEV+MMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALS Subject 6165 YKRVLVDEVHMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALS 6761
Range 3: 6163 to 6558 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
303.5 bits(656) | 0.0 | 129/132(98%) | 0/132(0%) | Minus/Plus |
Query 231 CIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQLEPLMT*LK*TPTCTCA*PSW 626 CIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLN TGVR*MFATCCPQ*P*GERKSVTLKRSLAVR NQ**DRCPKGQLEPLMT*LK*T TCTCA*PSW Subject 6163 CIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNRTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRTNQ**DRCPKGQLEPLMT*LK*TLTCTCA*PSW 6558
Range 4: 6589 to 6756 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
146.8 bits(314) | 0.0 | 55/56(98%) | 0/56(0%) | Minus/Plus |
Query 33 EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL 200 EKEKKHQ**QCMKHREKHSVMWYCLGRR+PMTPYSLNNRIYLLVCRDTHAHWFMPL Subject 6589 EKEKKHQ**QCMKHREKHSVMWYCLGRRKPMTPYSLNNRIYLLVCRDTHAHWFMPL 6756
Range 5: 6164 to 6442 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
214.1 bits(461) | 0.0 | 92/93(99%) | 0/93(0%) | Plus/Minus |
Query 347 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLY 625 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIM TSSTKTLLY Subject 6164 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMCTSSTKTLLY 6442
Range 6: 6494 to 6766 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
213.7 bits(460) | 0.0 | 89/91(98%) | 0/91(0%) | Plus/Minus |
Query 23 FGERAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI 295 F RAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI Subject 6494 FELRAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI 6766
Range 7: 6257 to 6766 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
347.9 bits(753) | 0.0 | 164/170(96%) | 0/170(0%) | Minus/Plus |
Query 23 FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWNH**RS*NKRRRVLVHDPXXXXXXXXXXXGKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRSFTK 532 FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*I+QVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G TSSKIAVQKANWNH**RS*NKR RVLVHDPVGEVGYEEVVEGKRKRNTSDDSA*STGKNIQ*CGIV*DEE R*LPIH*TTAYTCWFVETHTLTGLCRS K Subject 6257 FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IVQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*GQTSSKIAVQKANWNH**RS*NKR*RVLVHDPVGEVGYEEVVEGKRKRNTSDDSA*STGKNIQ*CGIV*DEESR*LPIH*TTAYTCWFVETHTLTGLCRSELK 6766
Range 8: 6164 to 6205 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
31.8 bits(63) | 0.0 | 13/14(93%) | 0/14(0%) | Minus/Plus |
Query 584 V*KGFGG*GVHDAS 625 V*KGFGG*G HDAS Subject 6164 V*KGFGG*GAHDAS 6205
Range 9: 6163 to 6534 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
263.6 bits(569) | 0.0 | 120/124(97%) | 0/124(0%) | Plus/Minus |
Query 255 RRRLFQLRHQWFQLAFWTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTXXXXXXXXXXXXDASCTPHPPKPFYT 626 R+RLFQLRHQWFQLAFWTAILLLV PYR*RPFQGNTFPFPLRSLRTTSSKHLTDTC I*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLDASC PHPPKPFYT Subject 6163 RQRLFQLRHQWFQLAFWTAILLLVCPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCTI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLDASCAPHPPKPFYT 6534
Range 10: 6619 to 6765 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
104.2 bits(221) | 0.0 | 46/49(94%) | 0/49(0%) | Plus/Minus |
Query 24 LVKERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA 170 L ERHKPVSVCVSTNQQVYAVV**IGSHR SSS*TIPHH*MFFPVLHA Subject 6619 LSSERHKPVSVCVSTNQQVYAVV**IGSHRLSSS*TIPHH*MFFPVLHA 6765
Nucleotide Sequence (355 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
244.8 | 1307.7 | 45% | 3.263e-63 | 96% | HQ130295.1 | |
244.8 | 1307.7 | 45% | 3.263e-63 | 96% | HQ130297.1 | |
244.8 | 1307.7 | 45% | 3.263e-63 | 96% | HQ130300.1 | |
244.8 | 1302.7 | 45% | 3.263e-63 | 95% | HQ130301.1 | |
244.8 | 1302.7 | 45% | 3.263e-63 | 95% | HQ130303.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 6 6 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130295.1 Length: 4711 Number of Matches: 9
Range 1: 3019 to 3339 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
244.8 bits(528) | 0.0 | 107/107(100%) | 0/107(0%) | Plus/Plus |
Query 35 Y*MI*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGF 355 Y*MI*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGF Subject 3019 Y*MI*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGF 3339
Range 2: 3033 to 3338 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
230.2 bits(496) | 0.0 | 102/102(100%) | 0/102(0%) | Minus/Minus |
Query 49 KPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPL 354 KPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPL Subject 3033 KPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPL 3338
Range 3: 3015 to 3197 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.9 bits(310) | 0.0 | 60/61(98%) | 0/61(0%) | Plus/Plus |
Query 31 GILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*SCQSRLERTITWF*Y 213 GILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS* CQSRLERTITWF*Y Subject 3015 GILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*GCQSRLERTITWF*Y 3197
Range 4: 3237 to 3338 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
73.0 bits(153) | 0.0 | 34/34(100%) | 0/34(0%) | Plus/Plus |
Query 253 SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL 354 SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL Subject 3237 SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL 3338
Range 5: 3010 to 3174 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
125.7 bits(268) | 0.0 | 53/55(96%) | 0/55(0%) | Minus/Minus |
Query 26 VLSDFDNFKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSNHSISHS 190 VLSDFDN KIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSNHSISH+ Subject 3010 VLSDFDNLKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSNHSISHT 3174
Range 6: 3226 to 3339 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.0 bits(190) | 0.0 | 38/38(100%) | 0/38(0%) | Minus/Minus |
Query 242 KAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL 355 KAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL Subject 3226 KAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL 3339
Range 7: 3170 to 3337 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.6 bits(283) | 0.0 | 56/56(100%) | 0/56(0%) | Plus/Plus |
Query 186 RTNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKA 353 RTNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKA Subject 3170 RTNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKA 3337
Range 8: 3014 to 3121 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
81.7 bits(172) | 0.0 | 36/36(100%) | 0/36(0%) | Plus/Plus |
Query 30 WDIE*FEVGREQQGEI*GERHTRYLRFIV*LSRV*M 137 WDIE*FEVGREQQGEI*GERHTRYLRFIV*LSRV*M Subject 3014 WDIE*FEVGREQQGEI*GERHTRYLRFIV*LSRV*M 3121
Range 9: 3083 to 3337 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
184.8 bits(397) | 0.0 | 84/85(99%) | 0/85(0%) | Minus/Minus |
Query 99 SLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QL*DKIAERKQLHLNPG*SDDKT*V 353 SLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*Q *DKIAERKQLHLNPG*SDDKT*V Subject 3083 SLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QP*DKIAERKQLHLNPG*SDDKT*V 3337
Grapevine leafroll associated virus 3 isolate 6 11 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130297.1 Length: 4711 Number of Matches: 9
Range 1: 3019 to 3339 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
244.8 bits(528) | 0.0 | 107/107(100%) | 0/107(0%) | Plus/Plus |
Query 35 Y*MI*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGF 355 Y*MI*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGF Subject 3019 Y*MI*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGF 3339
Range 2: 3033 to 3338 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
230.2 bits(496) | 0.0 | 102/102(100%) | 0/102(0%) | Minus/Minus |
Query 49 KPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPL 354 KPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPL Subject 3033 KPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPL 3338
Range 3: 3015 to 3197 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.9 bits(310) | 0.0 | 60/61(98%) | 0/61(0%) | Plus/Plus |
Query 31 GILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*SCQSRLERTITWF*Y 213 GILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS* CQSRLERTITWF*Y Subject 3015 GILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*GCQSRLERTITWF*Y 3197
Range 4: 3237 to 3338 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
73.0 bits(153) | 0.0 | 34/34(100%) | 0/34(0%) | Plus/Plus |
Query 253 SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL 354 SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL Subject 3237 SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL 3338
Range 5: 3010 to 3174 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
125.7 bits(268) | 0.0 | 53/55(96%) | 0/55(0%) | Minus/Minus |
Query 26 VLSDFDNFKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSNHSISHS 190 VLSDFDN KIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSNHSISH+ Subject 3010 VLSDFDNLKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSNHSISHT 3174
Range 6: 3226 to 3339 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.0 bits(190) | 0.0 | 38/38(100%) | 0/38(0%) | Minus/Minus |
Query 242 KAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL 355 KAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL Subject 3226 KAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL 3339
Range 7: 3170 to 3337 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.6 bits(283) | 0.0 | 56/56(100%) | 0/56(0%) | Plus/Plus |
Query 186 RTNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKA 353 RTNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKA Subject 3170 RTNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKA 3337
Range 8: 3014 to 3121 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
81.7 bits(172) | 0.0 | 36/36(100%) | 0/36(0%) | Plus/Plus |
Query 30 WDIE*FEVGREQQGEI*GERHTRYLRFIV*LSRV*M 137 WDIE*FEVGREQQGEI*GERHTRYLRFIV*LSRV*M Subject 3014 WDIE*FEVGREQQGEI*GERHTRYLRFIV*LSRV*M 3121
Range 9: 3083 to 3337 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
184.8 bits(397) | 0.0 | 84/85(99%) | 0/85(0%) | Minus/Minus |
Query 99 SLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QL*DKIAERKQLHLNPG*SDDKT*V 353 SLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*Q *DKIAERKQLHLNPG*SDDKT*V Subject 3083 SLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QP*DKIAERKQLHLNPG*SDDKT*V 3337
Grapevine leafroll associated virus 3 isolate 6 18 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130300.1 Length: 4711 Number of Matches: 9
Range 1: 3019 to 3339 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
244.8 bits(528) | 0.0 | 107/107(100%) | 0/107(0%) | Plus/Plus |
Query 35 Y*MI*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGF 355 Y*MI*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGF Subject 3019 Y*MI*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGF 3339
Range 2: 3033 to 3338 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
230.2 bits(496) | 0.0 | 102/102(100%) | 0/102(0%) | Minus/Minus |
Query 49 KPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPL 354 KPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPL Subject 3033 KPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPL 3338
Range 3: 3015 to 3197 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.9 bits(310) | 0.0 | 60/61(98%) | 0/61(0%) | Plus/Plus |
Query 31 GILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*SCQSRLERTITWF*Y 213 GILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS* CQSRLERTITWF*Y Subject 3015 GILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*GCQSRLERTITWF*Y 3197
Range 4: 3237 to 3338 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
73.0 bits(153) | 0.0 | 34/34(100%) | 0/34(0%) | Plus/Plus |
Query 253 SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL 354 SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL Subject 3237 SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL 3338
Range 5: 3010 to 3174 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
125.7 bits(268) | 0.0 | 53/55(96%) | 0/55(0%) | Minus/Minus |
Query 26 VLSDFDNFKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSNHSISHS 190 VLSDFDN KIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSNHSISH+ Subject 3010 VLSDFDNLKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSNHSISHT 3174
Range 6: 3226 to 3339 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.0 bits(190) | 0.0 | 38/38(100%) | 0/38(0%) | Minus/Minus |
Query 242 KAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL 355 KAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL Subject 3226 KAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL 3339
Range 7: 3170 to 3337 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.6 bits(283) | 0.0 | 56/56(100%) | 0/56(0%) | Plus/Plus |
Query 186 RTNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKA 353 RTNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKA Subject 3170 RTNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKA 3337
Range 8: 3014 to 3121 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
81.7 bits(172) | 0.0 | 36/36(100%) | 0/36(0%) | Plus/Plus |
Query 30 WDIE*FEVGREQQGEI*GERHTRYLRFIV*LSRV*M 137 WDIE*FEVGREQQGEI*GERHTRYLRFIV*LSRV*M Subject 3014 WDIE*FEVGREQQGEI*GERHTRYLRFIV*LSRV*M 3121
Range 9: 3083 to 3337 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
184.8 bits(397) | 0.0 | 84/85(99%) | 0/85(0%) | Minus/Minus |
Query 99 SLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QL*DKIAERKQLHLNPG*SDDKT*V 353 SLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*Q *DKIAERKQLHLNPG*SDDKT*V Subject 3083 SLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QP*DKIAERKQLHLNPG*SDDKT*V 3337
Grapevine leafroll associated virus 3 isolate 6 102 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130301.1 Length: 4711 Number of Matches: 9
Range 1: 3019 to 3339 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
244.8 bits(528) | 0.0 | 107/107(100%) | 0/107(0%) | Plus/Plus |
Query 35 Y*MI*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGF 355 Y*MI*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGF Subject 3019 Y*MI*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGF 3339
Range 2: 3033 to 3338 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
230.2 bits(496) | 0.0 | 102/102(100%) | 0/102(0%) | Minus/Minus |
Query 49 KPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPL 354 KPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPL Subject 3033 KPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPL 3338
Range 3: 3015 to 3197 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.9 bits(310) | 0.0 | 60/61(98%) | 0/61(0%) | Plus/Plus |
Query 31 GILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*SCQSRLERTITWF*Y 213 GILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS* CQSRLERTITWF*Y Subject 3015 GILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*GCQSRLERTITWF*Y 3197
Range 4: 3237 to 3338 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
73.0 bits(153) | 0.0 | 34/34(100%) | 0/34(0%) | Plus/Plus |
Query 253 SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL 354 SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL Subject 3237 SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL 3338
Range 5: 3010 to 3174 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.0 bits(262) | 0.0 | 52/55(95%) | 0/55(0%) | Minus/Minus |
Query 26 VLSDFDNFKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSNHSISHS 190 VLSDFDN KIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSNHSI H+ Subject 3010 VLSDFDNLKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSNHSIFHT 3174
Range 6: 3226 to 3339 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.0 bits(190) | 0.0 | 38/38(100%) | 0/38(0%) | Minus/Minus |
Query 242 KAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL 355 KAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL Subject 3226 KAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL 3339
Range 7: 3170 to 3337 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.6 bits(283) | 0.0 | 56/56(100%) | 0/56(0%) | Plus/Plus |
Query 186 RTNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKA 353 RTNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKA Subject 3170 RTNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKA 3337
Range 8: 3014 to 3121 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.4 bits(167) | 0.0 | 35/36(97%) | 0/36(0%) | Plus/Plus |
Query 30 WDIE*FEVGREQQGEI*GERHTRYLRFIV*LSRV*M 137 W+IE*FEVGREQQGEI*GERHTRYLRFIV*LSRV*M Subject 3014 WNIE*FEVGREQQGEI*GERHTRYLRFIV*LSRV*M 3121
Range 9: 3083 to 3337 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
184.8 bits(397) | 0.0 | 84/85(99%) | 0/85(0%) | Minus/Minus |
Query 99 SLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QL*DKIAERKQLHLNPG*SDDKT*V 353 SLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*Q *DKIAERKQLHLNPG*SDDKT*V Subject 3083 SLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QP*DKIAERKQLHLNPG*SDDKT*V 3337
Grapevine leafroll associated virus 3 isolate 6 114 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130303.1 Length: 4711 Number of Matches: 9
Range 1: 3019 to 3339 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
244.8 bits(528) | 0.0 | 107/107(100%) | 0/107(0%) | Plus/Plus |
Query 35 Y*MI*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGF 355 Y*MI*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGF Subject 3019 Y*MI*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGF 3339
Range 2: 3033 to 3338 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
230.2 bits(496) | 0.0 | 102/102(100%) | 0/102(0%) | Minus/Minus |
Query 49 KPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPL 354 KPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPL Subject 3033 KPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPL 3338
Range 3: 3015 to 3197 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.9 bits(310) | 0.0 | 60/61(98%) | 0/61(0%) | Plus/Plus |
Query 31 GILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*SCQSRLERTITWF*Y 213 GILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS* CQSRLERTITWF*Y Subject 3015 GILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*GCQSRLERTITWF*Y 3197
Range 4: 3237 to 3338 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
73.0 bits(153) | 0.0 | 34/34(100%) | 0/34(0%) | Plus/Plus |
Query 253 SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL 354 SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL Subject 3237 SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL 3338
Range 5: 3010 to 3174 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.0 bits(262) | 0.0 | 52/55(95%) | 0/55(0%) | Minus/Minus |
Query 26 VLSDFDNFKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSNHSISHS 190 VLSDFDN KIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSNHSI H+ Subject 3010 VLSDFDNLKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSNHSIFHT 3174
Range 6: 3226 to 3339 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.0 bits(190) | 0.0 | 38/38(100%) | 0/38(0%) | Minus/Minus |
Query 242 KAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL 355 KAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL Subject 3226 KAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL 3339
Range 7: 3170 to 3337 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.6 bits(283) | 0.0 | 56/56(100%) | 0/56(0%) | Plus/Plus |
Query 186 RTNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKA 353 RTNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKA Subject 3170 RTNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKA 3337
Range 8: 3014 to 3121 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.4 bits(167) | 0.0 | 35/36(97%) | 0/36(0%) | Plus/Plus |
Query 30 WDIE*FEVGREQQGEI*GERHTRYLRFIV*LSRV*M 137 W+IE*FEVGREQQGEI*GERHTRYLRFIV*LSRV*M Subject 3014 WNIE*FEVGREQQGEI*GERHTRYLRFIV*LSRV*M 3121
Range 9: 3083 to 3337 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
184.8 bits(397) | 0.0 | 84/85(99%) | 0/85(0%) | Minus/Minus |
Query 99 SLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QL*DKIAERKQLHLNPG*SDDKT*V 353 SLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*Q *DKIAERKQLHLNPG*SDDKT*V Subject 3083 SLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QP*DKIAERKQLHLNPG*SDDKT*V 3337
Nucleotide Sequence (369 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
279.7 | 1559.3 | 32% | 1.157e-73 | 96% | JX559645.1 | |
279.7 | 1559.3 | 32% | 1.157e-73 | 96% | GQ352631.1 | |
279.7 | 1559.3 | 32% | 1.157e-73 | 96% | GU983863.1 | |
276.0 | 1546.0 | 32% | 1.468e-72 | 96% | KX756669.1 | |
270.0 | 1498.8 | 32% | 8.986e-71 | 93% | EU344893.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 6
Range 1: 1539 to 1883 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
279.7 bits(604) | 0.0 | 111/115(97%) | 0/115(0%) | Plus/Plus |
Query 7 IARGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVCTTRGWCWFNNERLRGEIYRRRCFSSSFSVGFLMHMGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPRAPNT 351 I RGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVCTTRGWCWFNNERLRGEIYRRRCFSSSFSVGFLMHMGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLP P T Subject 1539 IVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVCTTRGWCWFNNERLRGEIYRRRCFSSSFSVGFLMHMGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPNVPKT 1883
Range 2: 1539 to 1877 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
275.5 bits(595) | 0.0 | 109/113(96%) | 0/113(0%) | Minus/Minus |
Query 7 WCPGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAHVHQETYRKGR*EATASINFSPQPFVIKPTPPSGGAYKRPFAHTPQLNARQGNITPWGCIHDEVLDRSPSPRN 345 W GEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAHVHQETYRKGR*EATASINFSPQPFVIKPTPPSGGAYKRPFAHTPQLNARQGNITPWGCIHDEVLDRSP+P N Subject 1539 WDIGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAHVHQETYRKGR*EATASINFSPQPFVIKPTPPSGGAYKRPFAHTPQLNARQGNITPWGCIHDEVLDRSPTPHN 1877
Range 3: 1538 to 1882 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
263.6 bits(569) | 0.0 | 111/115(97%) | 0/115(0%) | Plus/Plus |
Query 6 YCAGKGYDRGLHREYSPRV*CCLAAH*VVEYARKGVCMHHQRVVLV**RKAEGRNL*TPLLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQGTKH 350 YCAG GYDRGLHREYSPRV*CCLAAH*VVEYARKGVCMHHQRVVLV**RKAEGRNL*TPLLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQ K+ Subject 1538 YCAG*GYDRGLHREYSPRV*CCLAAH*VVEYARKGVCMHHQRVVLV**RKAEGRNL*TPLLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQCPKN 1882
Range 4: 1537 to 1878 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
255.8 bits(552) | 0.0 | 110/114(96%) | 0/114(0%) | Plus/Plus |
Query 5 LLRGEGLRSRTSS*IQPQGVMLPCRALSCGVCAKGRLYAPPEGGVGLITKG*GEKFIDAVASHLPFR*VS*CTWALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISPGHQ 346 LL G GLRSRTSS*IQPQGVMLPCRALSCGVCAKGRLYAPPEGGVGLITKG*GEKFIDAVASHLPFR*VS*CTWALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISP Q Subject 1537 LLCGVGLRSRTSS*IQPQGVMLPCRALSCGVCAKGRLYAPPEGGVGLITKG*GEKFIDAVASHLPFR*VS*CTWALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISPMSQ 1878
Range 5: 1537 to 1869 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
245.8 bits(530) | 0.0 | 110/111(99%) | 0/111(0%) | Minus/Minus |
Query 5 WGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSNGVYKFLPSAFRY*TNTTLWWCIQTPFRAYSTTQCAARQHHTLGLYXXXXXXXXPFPAQ* 337 WGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSNGVYKFLPSAFRY*TNTTLWWCIQTPFRAYSTTQCAARQHHTLGLYSR*SPRS*P+PAQ* Subject 1537 WGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSNGVYKFLPSAFRY*TNTTLWWCIQTPFRAYSTTQCAARQHHTLGLYSR*SPRS*PYPAQ* 1869
Range 6: 1538 to 1888 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
238.9 bits(515) | 0.0 | 113/117(97%) | 0/117(0%) | Minus/Minus |
Query 6 LGVFGALGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPMCIKKPTEKEDEKQRRXXXXXXXXXXLNQHHPLVVHTNALSRILHNSMRGKATSHPGAVFTMKSSIVALPRAI 356 + VFG LGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPMCIKKPTEKEDEKQRRL*ISPLSLSLLNQHHPLVVHTNALSRILHNSMRGKATSHPGAVFTMKSSIVALPR I Subject 1538 IAVFGTLGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPMCIKKPTEKEDEKQRRL*ISPLSLSLLNQHHPLVVHTNALSRILHNSMRGKATSHPGAVFTMKSSIVALPRTI 1888
Grapevine leafroll associated virus 3 isolate 621, complete genome
Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 6
Range 1: 1539 to 1883 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
279.7 bits(604) | 0.0 | 111/115(97%) | 0/115(0%) | Plus/Plus |
Query 7 IARGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVCTTRGWCWFNNERLRGEIYRRRCFSSSFSVGFLMHMGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPRAPNT 351 I RGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVCTTRGWCWFNNERLRGEIYRRRCFSSSFSVGFLMHMGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLP P T Subject 1539 IVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVCTTRGWCWFNNERLRGEIYRRRCFSSSFSVGFLMHMGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPNVPKT 1883
Range 2: 1539 to 1877 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
275.5 bits(595) | 0.0 | 109/113(96%) | 0/113(0%) | Minus/Minus |
Query 7 WCPGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAHVHQETYRKGR*EATASINFSPQPFVIKPTPPSGGAYKRPFAHTPQLNARQGNITPWGCIHDEVLDRSPSPRN 345 W GEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAHVHQETYRKGR*EATASINFSPQPFVIKPTPPSGGAYKRPFAHTPQLNARQGNITPWGCIHDEVLDRSP+P N Subject 1539 WDIGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAHVHQETYRKGR*EATASINFSPQPFVIKPTPPSGGAYKRPFAHTPQLNARQGNITPWGCIHDEVLDRSPTPHN 1877
Range 3: 1538 to 1882 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
263.6 bits(569) | 0.0 | 111/115(97%) | 0/115(0%) | Plus/Plus |
Query 6 YCAGKGYDRGLHREYSPRV*CCLAAH*VVEYARKGVCMHHQRVVLV**RKAEGRNL*TPLLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQGTKH 350 YCAG GYDRGLHREYSPRV*CCLAAH*VVEYARKGVCMHHQRVVLV**RKAEGRNL*TPLLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQ K+ Subject 1538 YCAG*GYDRGLHREYSPRV*CCLAAH*VVEYARKGVCMHHQRVVLV**RKAEGRNL*TPLLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQCPKN 1882
Range 4: 1537 to 1878 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
255.8 bits(552) | 0.0 | 110/114(96%) | 0/114(0%) | Plus/Plus |
Query 5 LLRGEGLRSRTSS*IQPQGVMLPCRALSCGVCAKGRLYAPPEGGVGLITKG*GEKFIDAVASHLPFR*VS*CTWALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISPGHQ 346 LL G GLRSRTSS*IQPQGVMLPCRALSCGVCAKGRLYAPPEGGVGLITKG*GEKFIDAVASHLPFR*VS*CTWALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISP Q Subject 1537 LLCGVGLRSRTSS*IQPQGVMLPCRALSCGVCAKGRLYAPPEGGVGLITKG*GEKFIDAVASHLPFR*VS*CTWALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISPMSQ 1878
Range 5: 1537 to 1869 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
245.8 bits(530) | 0.0 | 110/111(99%) | 0/111(0%) | Minus/Minus |
Query 5 WGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSNGVYKFLPSAFRY*TNTTLWWCIQTPFRAYSTTQCAARQHHTLGLYXXXXXXXXPFPAQ* 337 WGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSNGVYKFLPSAFRY*TNTTLWWCIQTPFRAYSTTQCAARQHHTLGLYSR*SPRS*P+PAQ* Subject 1537 WGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSNGVYKFLPSAFRY*TNTTLWWCIQTPFRAYSTTQCAARQHHTLGLYSR*SPRS*PYPAQ* 1869
Range 6: 1538 to 1888 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
238.9 bits(515) | 0.0 | 113/117(97%) | 0/117(0%) | Minus/Minus |
Query 6 LGVFGALGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPMCIKKPTEKEDEKQRRXXXXXXXXXXLNQHHPLVVHTNALSRILHNSMRGKATSHPGAVFTMKSSIVALPRAI 356 + VFG LGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPMCIKKPTEKEDEKQRRL*ISPLSLSLLNQHHPLVVHTNALSRILHNSMRGKATSHPGAVFTMKSSIVALPR I Subject 1538 IAVFGTLGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPMCIKKPTEKEDEKQRRL*ISPLSLSLLNQHHPLVVHTNALSRILHNSMRGKATSHPGAVFTMKSSIVALPRTI 1888
Grapevine leafroll associated virus 3 isolate WA MR, complete genome
Sequence ID: GU983863.1 Length: 18498 Number of Matches: 6
Range 1: 1539 to 1883 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
279.7 bits(604) | 0.0 | 111/115(97%) | 0/115(0%) | Plus/Plus |
Query 7 IARGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVCTTRGWCWFNNERLRGEIYRRRCFSSSFSVGFLMHMGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPRAPNT 351 I RGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVCTTRGWCWFNNERLRGEIYRRRCFSSSFSVGFLMHMGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLP P T Subject 1539 IVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVCTTRGWCWFNNERLRGEIYRRRCFSSSFSVGFLMHMGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPNVPKT 1883
Range 2: 1539 to 1877 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
275.5 bits(595) | 0.0 | 109/113(96%) | 0/113(0%) | Minus/Minus |
Query 7 WCPGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAHVHQETYRKGR*EATASINFSPQPFVIKPTPPSGGAYKRPFAHTPQLNARQGNITPWGCIHDEVLDRSPSPRN 345 W GEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAHVHQETYRKGR*EATASINFSPQPFVIKPTPPSGGAYKRPFAHTPQLNARQGNITPWGCIHDEVLDRSP+P N Subject 1539 WDIGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAHVHQETYRKGR*EATASINFSPQPFVIKPTPPSGGAYKRPFAHTPQLNARQGNITPWGCIHDEVLDRSPTPHN 1877
Range 3: 1538 to 1882 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
263.6 bits(569) | 0.0 | 111/115(97%) | 0/115(0%) | Plus/Plus |
Query 6 YCAGKGYDRGLHREYSPRV*CCLAAH*VVEYARKGVCMHHQRVVLV**RKAEGRNL*TPLLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQGTKH 350 YCAG GYDRGLHREYSPRV*CCLAAH*VVEYARKGVCMHHQRVVLV**RKAEGRNL*TPLLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQ K+ Subject 1538 YCAG*GYDRGLHREYSPRV*CCLAAH*VVEYARKGVCMHHQRVVLV**RKAEGRNL*TPLLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQCPKN 1882
Range 4: 1537 to 1878 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
255.8 bits(552) | 0.0 | 110/114(96%) | 0/114(0%) | Plus/Plus |
Query 5 LLRGEGLRSRTSS*IQPQGVMLPCRALSCGVCAKGRLYAPPEGGVGLITKG*GEKFIDAVASHLPFR*VS*CTWALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISPGHQ 346 LL G GLRSRTSS*IQPQGVMLPCRALSCGVCAKGRLYAPPEGGVGLITKG*GEKFIDAVASHLPFR*VS*CTWALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISP Q Subject 1537 LLCGVGLRSRTSS*IQPQGVMLPCRALSCGVCAKGRLYAPPEGGVGLITKG*GEKFIDAVASHLPFR*VS*CTWALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISPMSQ 1878
Range 5: 1537 to 1869 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
245.8 bits(530) | 0.0 | 110/111(99%) | 0/111(0%) | Minus/Minus |
Query 5 WGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSNGVYKFLPSAFRY*TNTTLWWCIQTPFRAYSTTQCAARQHHTLGLYXXXXXXXXPFPAQ* 337 WGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSNGVYKFLPSAFRY*TNTTLWWCIQTPFRAYSTTQCAARQHHTLGLYSR*SPRS*P+PAQ* Subject 1537 WGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSNGVYKFLPSAFRY*TNTTLWWCIQTPFRAYSTTQCAARQHHTLGLYSR*SPRS*PYPAQ* 1869
Range 6: 1538 to 1888 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
238.9 bits(515) | 0.0 | 113/117(97%) | 0/117(0%) | Minus/Minus |
Query 6 LGVFGALGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPMCIKKPTEKEDEKQRRXXXXXXXXXXLNQHHPLVVHTNALSRILHNSMRGKATSHPGAVFTMKSSIVALPRAI 356 + VFG LGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPMCIKKPTEKEDEKQRRL*ISPLSLSLLNQHHPLVVHTNALSRILHNSMRGKATSHPGAVFTMKSSIVALPR I Subject 1538 IAVFGTLGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPMCIKKPTEKEDEKQRRL*ISPLSLSLLNQHHPLVVHTNALSRILHNSMRGKATSHPGAVFTMKSSIVALPRTI 1888
Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome
Sequence ID: KX756669.1 Length: 18313 Number of Matches: 6
Range 1: 1354 to 1698 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
276.0 bits(596) | 0.0 | 110/115(96%) | 0/115(0%) | Plus/Plus |
Query 7 IARGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVCTTRGWCWFNNERLRGEIYRRRCFSSSFSVGFLMHMGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPRAPNT 351 I RGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVCTTRGWCWFNNERLRGEIYRRRCFSSSFSVGFLM MGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLP P T Subject 1354 IVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVCTTRGWCWFNNERLRGEIYRRRCFSSSFSVGFLMRMGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPNVPKT 1698
Range 2: 1354 to 1692 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
273.7 bits(591) | 0.0 | 108/113(96%) | 0/113(0%) | Minus/Minus |
Query 7 WCPGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAHVHQETYRKGR*EATASINFSPQPFVIKPTPPSGGAYKRPFAHTPQLNARQGNITPWGCIHDEVLDRSPSPRN 345 W GEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAH HQETYRKGR*EATASINFSPQPFVIKPTPPSGGAYKRPFAHTPQLNARQGNITPWGCIHDEVLDRSP+P N Subject 1354 WDIGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAHAHQETYRKGR*EATASINFSPQPFVIKPTPPSGGAYKRPFAHTPQLNARQGNITPWGCIHDEVLDRSPTPHN 1692
Range 3: 1353 to 1697 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
263.6 bits(569) | 0.0 | 111/115(97%) | 0/115(0%) | Plus/Plus |
Query 6 YCAGKGYDRGLHREYSPRV*CCLAAH*VVEYARKGVCMHHQRVVLV**RKAEGRNL*TPLLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQGTKH 350 YCAG GYDRGLHREYSPRV*CCLAAH*VVEYARKGVCMHHQRVVLV**RKAEGRNL*TPLLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQ K+ Subject 1353 YCAG*GYDRGLHREYSPRV*CCLAAH*VVEYARKGVCMHHQRVVLV**RKAEGRNL*TPLLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQCPKN 1697
Range 4: 1352 to 1693 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
253.5 bits(547) | 0.0 | 109/114(96%) | 0/114(0%) | Plus/Plus |
Query 5 LLRGEGLRSRTSS*IQPQGVMLPCRALSCGVCAKGRLYAPPEGGVGLITKG*GEKFIDAVASHLPFR*VS*CTWALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISPGHQ 346 LL G GLRSRTSS*IQPQGVMLPCRALSCGVCAKGRLYAPPEGGVGLITKG*GEKFIDAVASHLPFR*VS*C WALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISP Q Subject 1352 LLCGVGLRSRTSS*IQPQGVMLPCRALSCGVCAKGRLYAPPEGGVGLITKG*GEKFIDAVASHLPFR*VS*CAWALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISPMSQ 1693
Range 5: 1352 to 1684 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
245.8 bits(530) | 0.0 | 110/111(99%) | 0/111(0%) | Minus/Minus |
Query 5 WGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSNGVYKFLPSAFRY*TNTTLWWCIQTPFRAYSTTQCAARQHHTLGLYXXXXXXXXPFPAQ* 337 WGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSNGVYKFLPSAFRY*TNTTLWWCIQTPFRAYSTTQCAARQHHTLGLYSR*SPRS*P+PAQ* Subject 1352 WGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSNGVYKFLPSAFRY*TNTTLWWCIQTPFRAYSTTQCAARQHHTLGLYSR*SPRS*PYPAQ* 1684
Range 6: 1353 to 1703 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
233.4 bits(503) | 0.0 | 112/117(96%) | 0/117(0%) | Minus/Minus |
Query 6 LGVFGALGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPMCIKKPTEKEDEKQRRXXXXXXXXXXLNQHHPLVVHTNALSRILHNSMRGKATSHPGAVFTMKSSIVALPRAI 356 + VFG LGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPM IKKPTEKEDEKQRRL*ISPLSLSLLNQHHPLVVHTNALSRILHNSMRGKATSHPGAVFTMKSSIVALPR I Subject 1353 IAVFGTLGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPMRIKKPTEKEDEKQRRL*ISPLSLSLLNQHHPLVVHTNALSRILHNSMRGKATSHPGAVFTMKSSIVALPRTI 1703
Grapevine leafroll associated virus 3 isolate Cl 766, complete genome
Sequence ID: EU344893.1 Length: 17919 Number of Matches: 6
Range 1: 960 to 1298 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
270.0 bits(583) | 0.0 | 106/113(94%) | 0/113(0%) | Minus/Minus |
Query 7 WCPGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAHVHQETYRKGR*EATASINFSPQPFVIKPTPPSGGAYKRPFAHTPQLNARQGNITPWGCIHDEVLDRSPSPRN 345 W GEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAH HQETYRKGR* ATASINFSPQPFVIKPTPPSGGAYKRPFAHTPQLNARQGN+TPWGCIHDEVLDRSP+P N Subject 960 WDIGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAHAHQETYRKGR*GATASINFSPQPFVIKPTPPSGGAYKRPFAHTPQLNARQGNVTPWGCIHDEVLDRSPTPHN 1298
Range 2: 960 to 1304 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
269.1 bits(581) | 0.0 | 108/115(94%) | 0/115(0%) | Plus/Plus |
Query 7 IARGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVCTTRGWCWFNNERLRGEIYRRRCFSSSFSVGFLMHMGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPRAPNT 351 I RGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVC TRGWCWFNNERLRGEIYRRRC SSSFSVGFLM MGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLP P T Subject 960 IVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVCPTRGWCWFNNERLRGEIYRRRCSSSSFSVGFLMRMGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPNIPKT 1304
Range 3: 959 to 1303 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
251.7 bits(543) | 0.0 | 108/115(94%) | 0/115(0%) | Plus/Plus |
Query 6 YCAGKGYDRGLHREYSPRV*CCLAAH*VVEYARKGVCMHHQRVVLV**RKAEGRNL*TPLLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQGTKH 350 YCAG GYDRGLHREYSPRV* CLAAH*VVEYARKGVCM HQRVVLV**RKAEGRNL*TPLLLIFLFGRFLDAHGL*I ESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQ K+ Subject 959 YCAG*GYDRGLHREYSPRV*RCLAAH*VVEYARKGVCMPHQRVVLV**RKAEGRNL*TPLLLIFLFGRFLDAHGL*IAESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQYPKN 1303
Range 4: 958 to 1290 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
248.0 bits(535) | 0.0 | 106/111(95%) | 0/111(0%) | Plus/Plus |
Query 5 LLRGEGLRSRTSS*IQPQGVMLPCRALSCGVCAKGRLYAPPEGGVGLITKG*GEKFIDAVASHLPFR*VS*CTWALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISP 337 LL G GLRSRTSS*IQPQGV LPCRALSCGVCAKGRLYAPPEGGVGLITKG*GEKFIDAVA HLPFR*VS*C WALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISP Subject 958 LLCGVGLRSRTSS*IQPQGVTLPCRALSCGVCAKGRLYAPPEGGVGLITKG*GEKFIDAVAPHLPFR*VS*CAWALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISP 1290
Range 5: 958 to 1290 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
234.3 bits(505) | 0.0 | 107/111(96%) | 0/111(0%) | Minus/Minus |
Query 5 WGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSNGVYKFLPSAFRY*TNTTLWWCIQTPFRAYSTTQCAARQHHTLGLYXXXXXXXXPFPAQ* 337 WGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLS I*SPCASRNLPKRKMRSNGVYKFLPSAFRY*TNTTLWW IQTPFRAYSTTQCAARQ HTLGLYSR*SPRS*P+PAQ* Subject 958 WGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSAI*SPCASRNLPKRKMRSNGVYKFLPSAFRY*TNTTLWWGIQTPFRAYSTTQCAARQRHTLGLYSR*SPRS*PYPAQ* 1290
Range 6: 959 to 1309 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
225.6 bits(486) | 0.0 | 109/117(93%) | 0/117(0%) | Minus/Minus |
Query 6 LGVFGALGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPMCIKKPTEKEDEKQRRXXXXXXXXXXLNQHHPLVVHTNALSRILHNSMRGKATSHPGAVFTMKSSIVALPRAI 356 + VFG LGR*TSALFHPKVRSSLSDGMCSMFVPANLTAF+DLKPM IKKPTEKEDE+QRRL*ISPLSLSLLNQHHPLV HTNALSRILHNSMRGKATSHPGAVFTMKSSIVALPR I Subject 959 IAVFGILGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFSDLKPMRIKKPTEKEDEEQRRL*ISPLSLSLLNQHHPLVGHTNALSRILHNSMRGKATSHPGAVFTMKSSIVALPRTI 1309
Nucleotide Sequence (300 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
230.2 | 1300.4 | 44% | 6.227e-59 | 99% | NC_004667.1 | |
230.2 | 1300.4 | 44% | 6.227e-59 | 99% | KP866976.1 | |
230.2 | 1300.4 | 44% | 6.227e-59 | 99% | KP866977.1 | |
230.2 | 1300.4 | 44% | 6.227e-59 | 99% | KP866980.1 | |
230.2 | 1300.4 | 44% | 6.227e-59 | 99% | KP866983.1 |
Alignments
Grapevine leafroll associated virus 3, complete genome
Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 6
Range 1: 10660 to 10956 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
230.2 bits(496) | 0.0 | 98/99(99%) | 0/99(0%) | Minus/Plus |
Query 3 Y*RFLILGEGLSSSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNW 299 Y*RFLILGEGLS+SHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNW Subject 10660 Y*RFLILGEGLSTSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNW 10956
Range 2: 10660 to 10956 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
228.8 bits(493) | 0.0 | 99/99(100%) | 0/99(0%) | Plus/Minus |
Query 3 PVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRKSLPQNQKPLI 299 PVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRKSLPQNQKPLI Subject 10660 PVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRKSLPQNQKPLI 10956
Range 3: 10659 to 10958 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.9 bits(491) | 0.0 | 99/100(99%) | 0/100(0%) | Minus/Plus |
Query 1 LLAVFDFGGGTFVVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELD 300 LLAVFDFGGGTF VSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELD Subject 10659 LLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELD 10958
Range 4: 10659 to 10958 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
225.6 bits(486) | 0.0 | 99/100(99%) | 0/100(0%) | Plus/Minus |
Query 1 VQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DDESPSPKIKNR** 300 VQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*D ESPSPKIKNR** Subject 10659 VQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DVESPSPKIKNR** 10958
Range 5: 10661 to 10909 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
196.7 bits(423) | 0.0 | 82/83(99%) | 0/83(0%) | Plus/Minus |
Query 50 GIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETTKVPPPKSKTAN 298 GIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNET+KVPPPKSKTAN Subject 10661 GIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETSKVPPPKSKTAN 10909
Range 6: 10661 to 10909 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
191.2 bits(411) | 0.0 | 83/83(100%) | 0/83(0%) | Minus/Plus |
Query 50 ISGF*FWGRDFRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYP 298 ISGF*FWGRDFRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYP Subject 10661 ISGF*FWGRDFRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYP 10909
Grapevine leafroll associated virus 3 isolate DA 68 heat shock protein 70 like protein (HSP70) gene, partial cds
Sequence ID: KP866976.1 Length: 1140 Number of Matches: 6
Range 1: 297 to 593 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
230.2 bits(496) | 0.0 | 98/99(99%) | 0/99(0%) | Minus/Plus |
Query 3 Y*RFLILGEGLSSSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNW 299 Y*RFLILGEGLS+SHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNW Subject 297 Y*RFLILGEGLSTSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNW 593
Range 2: 297 to 593 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
228.8 bits(493) | 0.0 | 99/99(100%) | 0/99(0%) | Plus/Minus |
Query 3 PVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRKSLPQNQKPLI 299 PVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRKSLPQNQKPLI Subject 297 PVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRKSLPQNQKPLI 593
Range 3: 296 to 595 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.9 bits(491) | 0.0 | 99/100(99%) | 0/100(0%) | Minus/Plus |
Query 1 LLAVFDFGGGTFVVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELD 300 LLAVFDFGGGTF VSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELD Subject 296 LLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELD 595
Range 4: 296 to 595 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
225.6 bits(486) | 0.0 | 99/100(99%) | 0/100(0%) | Plus/Minus |
Query 1 VQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DDESPSPKIKNR** 300 VQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*D ESPSPKIKNR** Subject 296 VQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DVESPSPKIKNR** 595
Range 5: 298 to 546 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
196.7 bits(423) | 0.0 | 82/83(99%) | 0/83(0%) | Plus/Minus |
Query 50 GIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETTKVPPPKSKTAN 298 GIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNET+KVPPPKSKTAN Subject 298 GIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETSKVPPPKSKTAN 546
Range 6: 298 to 546 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
191.2 bits(411) | 0.0 | 83/83(100%) | 0/83(0%) | Minus/Plus |
Query 50 ISGF*FWGRDFRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYP 298 ISGF*FWGRDFRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYP Subject 298 ISGF*FWGRDFRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYP 546
Grapevine leafroll associated virus 3 isolate DA 69 heat shock protein 70 like protein (HSP70) gene, partial cds
Sequence ID: KP866977.1 Length: 1140 Number of Matches: 6
Range 1: 297 to 593 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
230.2 bits(496) | 0.0 | 98/99(99%) | 0/99(0%) | Minus/Plus |
Query 3 Y*RFLILGEGLSSSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNW 299 Y*RFLILGEGLS+SHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNW Subject 297 Y*RFLILGEGLSTSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNW 593
Range 2: 297 to 593 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
228.8 bits(493) | 0.0 | 99/99(100%) | 0/99(0%) | Plus/Minus |
Query 3 PVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRKSLPQNQKPLI 299 PVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRKSLPQNQKPLI Subject 297 PVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRKSLPQNQKPLI 593
Range 3: 296 to 595 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.9 bits(491) | 0.0 | 99/100(99%) | 0/100(0%) | Minus/Plus |
Query 1 LLAVFDFGGGTFVVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELD 300 LLAVFDFGGGTF VSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELD Subject 296 LLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELD 595
Range 4: 296 to 595 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
225.6 bits(486) | 0.0 | 99/100(99%) | 0/100(0%) | Plus/Minus |
Query 1 VQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DDESPSPKIKNR** 300 VQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*D ESPSPKIKNR** Subject 296 VQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DVESPSPKIKNR** 595
Range 5: 298 to 546 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
196.7 bits(423) | 0.0 | 82/83(99%) | 0/83(0%) | Plus/Minus |
Query 50 GIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETTKVPPPKSKTAN 298 GIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNET+KVPPPKSKTAN Subject 298 GIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETSKVPPPKSKTAN 546
Range 6: 298 to 546 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
191.2 bits(411) | 0.0 | 83/83(100%) | 0/83(0%) | Minus/Plus |
Query 50 ISGF*FWGRDFRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYP 298 ISGF*FWGRDFRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYP Subject 298 ISGF*FWGRDFRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYP 546
Grapevine leafroll associated virus 3 isolate DOB 114 heat shock protein 70 like protein (HSP70) gene, partial cds
Sequence ID: KP866980.1 Length: 1140 Number of Matches: 6
Range 1: 297 to 593 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
230.2 bits(496) | 0.0 | 98/99(99%) | 0/99(0%) | Minus/Plus |
Query 3 Y*RFLILGEGLSSSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNW 299 Y*RFLILGEGLS+SHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNW Subject 297 Y*RFLILGEGLSTSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNW 593
Range 2: 297 to 593 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
228.8 bits(493) | 0.0 | 99/99(100%) | 0/99(0%) | Plus/Minus |
Query 3 PVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRKSLPQNQKPLI 299 PVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRKSLPQNQKPLI Subject 297 PVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRKSLPQNQKPLI 593
Range 3: 296 to 595 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.9 bits(491) | 0.0 | 99/100(99%) | 0/100(0%) | Minus/Plus |
Query 1 LLAVFDFGGGTFVVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELD 300 LLAVFDFGGGTF VSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELD Subject 296 LLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELD 595
Range 4: 296 to 595 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
225.6 bits(486) | 0.0 | 99/100(99%) | 0/100(0%) | Plus/Minus |
Query 1 VQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DDESPSPKIKNR** 300 VQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*D ESPSPKIKNR** Subject 296 VQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DVESPSPKIKNR** 595
Range 5: 298 to 546 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
196.7 bits(423) | 0.0 | 82/83(99%) | 0/83(0%) | Plus/Minus |
Query 50 GIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETTKVPPPKSKTAN 298 GIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNET+KVPPPKSKTAN Subject 298 GIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETSKVPPPKSKTAN 546
Range 6: 298 to 546 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
191.2 bits(411) | 0.0 | 83/83(100%) | 0/83(0%) | Minus/Plus |
Query 50 ISGF*FWGRDFRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYP 298 ISGF*FWGRDFRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYP Subject 298 ISGF*FWGRDFRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYP 546
Grapevine leafroll associated virus 3 isolate DOB 19 heat shock protein 70 like protein (HSP70) gene, partial cds
Sequence ID: KP866983.1 Length: 1140 Number of Matches: 6
Range 1: 297 to 593 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
230.2 bits(496) | 0.0 | 98/99(99%) | 0/99(0%) | Minus/Plus |
Query 3 Y*RFLILGEGLSSSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNW 299 Y*RFLILGEGLS+SHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNW Subject 297 Y*RFLILGEGLSTSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNW 593
Range 2: 297 to 593 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
228.8 bits(493) | 0.0 | 99/99(100%) | 0/99(0%) | Plus/Minus |
Query 3 PVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRKSLPQNQKPLI 299 PVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRKSLPQNQKPLI Subject 297 PVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRKSLPQNQKPLI 593
Range 3: 296 to 595 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.9 bits(491) | 0.0 | 99/100(99%) | 0/100(0%) | Minus/Plus |
Query 1 LLAVFDFGGGTFVVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELD 300 LLAVFDFGGGTF VSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELD Subject 296 LLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELD 595
Range 4: 296 to 595 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
225.6 bits(486) | 0.0 | 99/100(99%) | 0/100(0%) | Plus/Minus |
Query 1 VQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DDESPSPKIKNR** 300 VQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*D ESPSPKIKNR** Subject 296 VQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DVESPSPKIKNR** 595
Range 5: 298 to 546 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
196.7 bits(423) | 0.0 | 82/83(99%) | 0/83(0%) | Plus/Minus |
Query 50 GIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETTKVPPPKSKTAN 298 GIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNET+KVPPPKSKTAN Subject 298 GIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETSKVPPPKSKTAN 546
Range 6: 298 to 546 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
191.2 bits(411) | 0.0 | 83/83(100%) | 0/83(0%) | Minus/Plus |
Query 50 ISGF*FWGRDFRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYP 298 ISGF*FWGRDFRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYP Subject 298 ISGF*FWGRDFRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYP 546
Nucleotide Sequence (496 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
368.1 | 2100.1 | 14% | 4.362e-100 | 92% | GU983863.1 | |
367.6 | 2090.5 | 14% | 5.992e-100 | 85% | GQ352631.1 | |
367.6 | 2101.0 | 14% | 5.992e-100 | 92% | KX756669.1 | |
367.2 | 2090.9 | 14% | 8.232e-100 | 92% | JX559645.1 | |
361.2 | 2086.4 | 14% | 5.113e-98 | 92% | EU344893.1 |
Alignments
Grapevine leafroll associated virus 3 isolate WA MR, complete genome
Sequence ID: GU983863.1 Length: 18498 Number of Matches: 10
Range 1: 10274 to 10768 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
368.1 bits(797) | 0.0 | 160/165(97%) | 0/165(0%) | Minus/Plus |
Query 1 VLSYMTLRQNYELSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSCRAKVES*FYIEVGVFVYGRF*TGNTVASSRFCLRDNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIWGQRLYSCGR*CLL*N 495 VLSYMTLRQNYE SFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC AKV S*FYIEVGVFVYGRF*TGNTVASSRFCLRDNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGS YRFWNHLQYNLLFPIWGQRLYSCGR*CL *N Subject 10274 VLSYMTLRQNYEFSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC*AKVVS*FYIEVGVFVYGRF*TGNTVASSRFCLRDNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSGYRFWNHLQYNLLFPIWGQRLYSCGR*CLR*N 10768
Range 2: 10276 to 10767 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
362.6 bits(785) | 0.0 | 159/164(97%) | 0/164(0%) | Minus/Plus |
Query 2 VVVYDATSKL*TFLRVGVVECVHRR*TRFSGDINRLLREIGIERVRLKREIGEGATRMIFVQSEGRIVILY*SRRICLWTILNRQYCC**SILSS**FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLK 493 VVVYDATSKL* FLRVGVVECVHRR*TRFSGDINR LREIGIERVRLKREIGEGATRMIFV SEG IVILY*SRRICLWTILNRQYCC**SILSS**FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLK Subject 10276 VVVYDATSKL*IFLRVGVVECVHRR*TRFSGDINRFLREIGIERVRLKREIGEGATRMIFVLSEGSIVILY*SRRICLWTILNRQYCC**SILSS**FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWKWV*ILEPPSVQFAFPHLGSAVVLLWPVVFTLK 10767
Range 3: 10274 to 10528 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
195.8 bits(421) | 0.0 | 83/85(98%) | 0/85(0%) | Plus/Minus |
Query 241 ACLKSSINKYAYFNIKSRFYLRSARRSFAWRLPRFLF*GELVLSQSRAKAYLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH 495 ACLKSSINKYAYFNIKSR+YLRSARRSFAWRLPRFLF*GELVLSQSRAK YLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH Subject 10274 ACLKSSINKYAYFNIKSRYYLRSARRSFAWRLPRFLF*GELVLSQSRAKTYLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH 10528
Range 4: 10528 to 10767 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
184.8 bits(397) | 0.0 | 78/80(98%) | 0/80(0%) | Plus/Minus |
Query 2 FQSKHYRPQEYNR*PQMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELSRRQNRLLATVL 241 FQ KHYRPQEYNR*PQMGKSKLY*RWFQNLY LPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELSRRQNRLLATVL Subject 10528 FQRKHYRPQEYNR*PQMGKSKLY*RWFQNLYPLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELSRRQNRLLATVL 10767
Range 5: 10353 to 10766 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
324.1 bits(701) | 0.0 | 134/138(97%) | 0/138(0%) | Plus/Minus |
Query 3 FKVNTTGHRSTTADPRWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYHEDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLCTKIIRVAPSPISLLRRTRSIPISRKSLFMSPLNLV 416 F VNTTGHRSTTADPRWGKANCTEGGSKIYT+FHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYHEDKIDY*QQYCLFKIVHKQIRLLQYKITILPSL TKIIRVAPSPISLLRRTRSIPISRK+LFMSPLNLV Subject 10353 FNVNTTGHRSTTADPRWGKANCTEGGSKIYTHFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYHEDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLSTKIIRVAPSPISLLRRTRSIPISRKNLFMSPLNLV 10766
Range 6: 10275 to 10313 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
34.1 bits(68) | 0.0 | 12/13(92%) | 0/13(0%) | Plus/Minus |
Query 456 KVHNFDVASYTTT 494 K+HNFDVASYTTT Subject 10275 KIHNFDVASYTTT 10313
Range 7: 10275 to 10529 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.4 bits(418) | 0.0 | 83/85(98%) | 0/85(0%) | Minus/Plus |
Query 240 CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*AFARDWDRTSSP*KRNRGRRHANDLRAERR*NRDFILK*AYLFMDDFKQA 494 CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK* FARDWDRTSSP*KRNRGRRHANDLRAERR* RDFILK*AYLFMDDFKQA Subject 10275 CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*VFARDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*AYLFMDDFKQA 10529
Range 8: 10596 to 10766 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
130.7 bits(279) | 0.0 | 56/57(98%) | 0/57(0%) | Minus/Plus |
Query 3 PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYFE 173 PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVY E Subject 10596 PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVE 10766
Range 9: 10273 to 10479 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
161.4 bits(346) | 0.0 | 66/69(96%) | 0/69(0%) | Plus/Minus |
Query 290 HDSTFALHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKESS*F*RSVIYDNT 496 HD+TFA HEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKE+S*F*RSVIYDNT Subject 10273 HDTTFAQHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKENS*F*RSVIYDNT 10479
Range 10: 10580 to 10768 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.0 bits(308) | 0.0 | 62/63(98%) | 0/63(0%) | Plus/Minus |
Query 1 VSK*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR 189 VS *TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR Subject 10580 VST*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR 10768
Grapevine leafroll associated virus 3 isolate 621, complete genome
Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 10
Range 1: 10274 to 10768 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
367.6 bits(796) | 0.0 | 160/165(97%) | 0/165(0%) | Minus/Plus |
Query 1 VLSYMTLRQNYELSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSCRAKVES*FYIEVGVFVYGRF*TGNTVASSRFCLRDNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIWGQRLYSCGR*CLL*N 495 VLSYMTLRQNYE SFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC AKV S*FYIEVGVFVYGRF*TGNTVASSRFCL DNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIWGQRLYSCGR*CL *N Subject 10274 VLSYMTLRQNYEFSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC*AKVVS*FYIEVGVFVYGRF*TGNTVASSRFCLCDNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIWGQRLYSCGR*CLR*N 10768
Range 2: 10274 to 10528 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
195.3 bits(420) | 0.0 | 82/85(96%) | 0/85(0%) | Plus/Minus |
Query 241 ACLKSSINKYAYFNIKSRFYLRSARRSFAWRLPRFLF*GELVLSQSRAKAYLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH 495 ACLKSSINKYAYFNIKSR+YLRSARRSFAWRLPRFLF*GELVLSQSRAK YLCRH*TSSSADERTQRRLHEGKFIILT*RH+RQH Subject 10274 ACLKSSINKYAYFNIKSRYYLRSARRSFAWRLPRFLF*GELVLSQSRAKTYLCRH*TSSSADERTQRRLHEGKFIILT*RHVRQH 10528
Range 3: 10528 to 10767 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
186.2 bits(400) | 0.0 | 78/80(98%) | 0/80(0%) | Plus/Minus |
Query 2 FQSKHYRPQEYNR*PQMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELSRRQNRLLATVL 241 FQ KHYRPQEYNR*PQMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELS+RQNRLLATVL Subject 10528 FQRKHYRPQEYNR*PQMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELSQRQNRLLATVL 10767
Range 4: 10276 to 10767 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
359.8 bits(779) | 0.0 | 158/164(96%) | 0/164(0%) | Minus/Plus |
Query 2 VVVYDATSKL*TFLRVGVVECVHRR*TRFSGDINRLLREIGIERVRLKREIGEGATRMIFVQSEGRIVILY*SRRICLWTILNRQYCC**SILSS**FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLK 493 VVV+DATSKL* FLRVGVVECVHRR*TRFSGDINR LREIGIERVRLKREIGEGATRMIFV SEG IVILY*SRRICLWTILNRQYCC**SILS **FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLK Subject 10276 VVVHDATSKL*IFLRVGVVECVHRR*TRFSGDINRFLREIGIERVRLKREIGEGATRMIFVLSEGSIVILY*SRRICLWTILNRQYCC**SILSL**FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLK 10767
Range 5: 10353 to 10766 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
324.6 bits(702) | 0.0 | 134/138(97%) | 0/138(0%) | Plus/Minus |
Query 3 FKVNTTGHRSTTADPRWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYHEDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLCTKIIRVAPSPISLLRRTRSIPISRKSLFMSPLNLV 416 F VNTTGHRSTTADPRWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYH+DKIDY*QQYCLFKIVHKQIRLLQYKITILPSL TKIIRVAPSPISLLRRTRSIPISRK+LFMSPLNLV Subject 10353 FNVNTTGHRSTTADPRWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYHKDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLSTKIIRVAPSPISLLRRTRSIPISRKNLFMSPLNLV 10766
Range 6: 10275 to 10313 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
29.9 bits(59) | 0.0 | 11/13(85%) | 0/13(0%) | Plus/Minus |
Query 456 KVHNFDVASYTTT 494 K+HNFDVAS TTT Subject 10275 KIHNFDVASCTTT 10313
Range 7: 10275 to 10529 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
192.1 bits(413) | 0.0 | 82/85(96%) | 0/85(0%) | Minus/Plus |
Query 240 CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*AFARDWDRTSSP*KRNRGRRHANDLRAERR*NRDFILK*AYLFMDDFKQA 494 CCR *RYVKIMNFPSCRRR*VRSSALDEV*WRHK* FARDWDRTSSP*KRNRGRRHANDLRAERR* RDFILK*AYLFMDDFKQA Subject 10275 CCRT*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*VFARDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*AYLFMDDFKQA 10529
Range 8: 10596 to 10766 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
130.7 bits(279) | 0.0 | 56/57(98%) | 0/57(0%) | Minus/Plus |
Query 3 PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYFE 173 PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVY E Subject 10596 PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVE 10766
Range 9: 10273 to 10479 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
160.1 bits(343) | 0.0 | 65/69(94%) | 0/69(0%) | Plus/Minus |
Query 290 HDSTFALHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKESS*F*RSVIYDNT 496 HD+TFA HEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKE+S*F*RSV+YDNT Subject 10273 HDTTFAQHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKENS*F*RSVMYDNT 10479
Range 10: 10580 to 10768 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.0 bits(308) | 0.0 | 62/63(98%) | 0/63(0%) | Plus/Minus |
Query 1 VSK*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR 189 VS *TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR Subject 10580 VST*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR 10768
Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome
Sequence ID: KX756669.1 Length: 18313 Number of Matches: 10
Range 1: 10089 to 10583 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
367.6 bits(796) | 0.0 | 160/165(97%) | 0/165(0%) | Minus/Plus |
Query 1 VLSYMTLRQNYELSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSCRAKVES*FYIEVGVFVYGRF*TGNTVASSRFCLRDNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIWGQRLYSCGR*CLL*N 495 VLSYMTLRQNYE SFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC AKV S*FYIEVGVFVYGRF*TGNTVASSRFCL DNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIWGQRLYSCGR*CL *N Subject 10089 VLSYMTLRQNYEFSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC*AKVVS*FYIEVGVFVYGRF*TGNTVASSRFCLCDNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIWGQRLYSCGR*CLR*N 10583
Range 2: 10091 to 10582 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
362.1 bits(784) | 0.0 | 159/164(97%) | 0/164(0%) | Minus/Plus |
Query 2 VVVYDATSKL*TFLRVGVVECVHRR*TRFSGDINRLLREIGIERVRLKREIGEGATRMIFVQSEGRIVILY*SRRICLWTILNRQYCC**SILSS**FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLK 493 VVVYDATSKL* FLRVGVVECVHRR*TRFSGDINR LREIGIERVRLKREIGEGATRMIFV SEG IVILY*SRRICLWTILNRQYCC**SILS **FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLK Subject 10091 VVVYDATSKL*IFLRVGVVECVHRR*TRFSGDINRFLREIGIERVRLKREIGEGATRMIFVLSEGSIVILY*SRRICLWTILNRQYCC**SILSL**FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLK 10582
Range 3: 10089 to 10343 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
195.8 bits(421) | 0.0 | 83/85(98%) | 0/85(0%) | Plus/Minus |
Query 241 ACLKSSINKYAYFNIKSRFYLRSARRSFAWRLPRFLF*GELVLSQSRAKAYLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH 495 ACLKSSINKYAYFNIKSR+YLRSARRSFAWRLPRFLF*GELVLSQSRAK YLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH Subject 10089 ACLKSSINKYAYFNIKSRYYLRSARRSFAWRLPRFLF*GELVLSQSRAKTYLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH 10343
Range 4: 10343 to 10582 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
186.2 bits(400) | 0.0 | 78/80(98%) | 0/80(0%) | Plus/Minus |
Query 2 FQSKHYRPQEYNR*PQMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELSRRQNRLLATVL 241 FQ KHYRPQEYNR*PQMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELS+RQNRLLATVL Subject 10343 FQRKHYRPQEYNR*PQMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELSQRQNRLLATVL 10582
Range 5: 10168 to 10581 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
324.6 bits(702) | 0.0 | 134/138(97%) | 0/138(0%) | Plus/Minus |
Query 3 FKVNTTGHRSTTADPRWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYHEDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLCTKIIRVAPSPISLLRRTRSIPISRKSLFMSPLNLV 416 F VNTTGHRSTTADPRWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYH+DKIDY*QQYCLFKIVHKQIRLLQYKITILPSL TKIIRVAPSPISLLRRTRSIPISRK+LFMSPLNLV Subject 10168 FNVNTTGHRSTTADPRWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYHKDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLSTKIIRVAPSPISLLRRTRSIPISRKNLFMSPLNLV 10581
Range 6: 10090 to 10128 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
34.1 bits(68) | 0.0 | 12/13(92%) | 0/13(0%) | Plus/Minus |
Query 456 KVHNFDVASYTTT 494 K+HNFDVASYTTT Subject 10090 KIHNFDVASYTTT 10128
Range 7: 10090 to 10344 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.4 bits(418) | 0.0 | 83/85(98%) | 0/85(0%) | Minus/Plus |
Query 240 CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*AFARDWDRTSSP*KRNRGRRHANDLRAERR*NRDFILK*AYLFMDDFKQA 494 CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK* FARDWDRTSSP*KRNRGRRHANDLRAERR* RDFILK*AYLFMDDFKQA Subject 10090 CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*VFARDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*AYLFMDDFKQA 10344
Range 8: 10411 to 10581 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
130.7 bits(279) | 0.0 | 56/57(98%) | 0/57(0%) | Minus/Plus |
Query 3 PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYFE 173 PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVY E Subject 10411 PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVE 10581
Range 9: 10088 to 10294 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
161.4 bits(346) | 0.0 | 66/69(96%) | 0/69(0%) | Plus/Minus |
Query 290 HDSTFALHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKESS*F*RSVIYDNT 496 HD+TFA HEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKE+S*F*RSVIYDNT Subject 10088 HDTTFAQHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKENS*F*RSVIYDNT 10294
Range 10: 10395 to 10583 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.0 bits(308) | 0.0 | 62/63(98%) | 0/63(0%) | Plus/Minus |
Query 1 VSK*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR 189 VS *TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR Subject 10395 VST*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR 10583
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 10
Range 1: 10274 to 10768 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
367.2 bits(795) | 0.0 | 159/165(96%) | 0/165(0%) | Minus/Plus |
Query 1 VLSYMTLRQNYELSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSCRAKVES*FYIEVGVFVYGRF*TGNTVASSRFCLRDNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIWGQRLYSCGR*CLL*N 495 VLSYMTLRQNYE SFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC AKV S*FYIEVGVFVYGRF*TGNTVASSRFCL DNSVAGSYVCRPE+TAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIWGQRLYSCGR*CL *N Subject 10274 VLSYMTLRQNYEFSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC*AKVVS*FYIEVGVFVYGRF*TGNTVASSRFCLCDNSVAGSYVCRPEITAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIWGQRLYSCGR*CLR*N 10768
Range 2: 10276 to 10767 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
358.9 bits(777) | 0.0 | 158/164(96%) | 0/164(0%) | Minus/Plus |
Query 2 VVVYDATSKL*TFLRVGVVECVHRR*TRFSGDINRLLREIGIERVRLKREIGEGATRMIFVQSEGRIVILY*SRRICLWTILNRQYCC**SILSS**FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLK 493 VVVYDATSKL* FLRVGVVECVHRR*TRFSGDINR LREIGIERVRLKREIGEGATRMIFV SEG IVILY*SRRICLWTILNRQYCC**SILS **FCCWFLRLSSR YSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLK Subject 10276 VVVYDATSKL*IFLRVGVVECVHRR*TRFSGDINRFLREIGIERVRLKREIGEGATRMIFVLSEGSIVILY*SRRICLWTILNRQYCC**SILSL**FCCWFLRLSSRDYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLK 10767
Range 3: 10274 to 10528 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
195.8 bits(421) | 0.0 | 83/85(98%) | 0/85(0%) | Plus/Minus |
Query 241 ACLKSSINKYAYFNIKSRFYLRSARRSFAWRLPRFLF*GELVLSQSRAKAYLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH 495 ACLKSSINKYAYFNIKSR+YLRSARRSFAWRLPRFLF*GELVLSQSRAK YLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH Subject 10274 ACLKSSINKYAYFNIKSRYYLRSARRSFAWRLPRFLF*GELVLSQSRAKTYLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH 10528
Range 4: 10528 to 10767 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
183.4 bits(394) | 0.0 | 77/80(96%) | 0/80(0%) | Plus/Minus |
Query 2 FQSKHYRPQEYNR*PQMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELSRRQNRLLATVL 241 FQ KHYRPQEYNR*PQMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAV SGRQT*EPATELS+RQNRLLATVL Subject 10528 FQRKHYRPQEYNR*PQMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVISGRQT*EPATELSQRQNRLLATVL 10767
Range 5: 10353 to 10766 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
320.9 bits(694) | 0.0 | 133/138(96%) | 0/138(0%) | Plus/Minus |
Query 3 FKVNTTGHRSTTADPRWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYHEDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLCTKIIRVAPSPISLLRRTRSIPISRKSLFMSPLNLV 416 F VNTTGHRSTTADPRWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL* RDDKRKNQQQNYH+DKIDY*QQYCLFKIVHKQIRLLQYKITILPSL TKIIRVAPSPISLLRRTRSIPISRK+LFMSPLNLV Subject 10353 FNVNTTGHRSTTADPRWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*SRDDKRKNQQQNYHKDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLSTKIIRVAPSPISLLRRTRSIPISRKNLFMSPLNLV 10766
Range 6: 10275 to 10313 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
34.1 bits(68) | 0.0 | 12/13(92%) | 0/13(0%) | Plus/Minus |
Query 456 KVHNFDVASYTTT 494 K+HNFDVASYTTT Subject 10275 KIHNFDVASYTTT 10313
Range 7: 10275 to 10529 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.4 bits(418) | 0.0 | 83/85(98%) | 0/85(0%) | Minus/Plus |
Query 240 CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*AFARDWDRTSSP*KRNRGRRHANDLRAERR*NRDFILK*AYLFMDDFKQA 494 CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK* FARDWDRTSSP*KRNRGRRHANDLRAERR* RDFILK*AYLFMDDFKQA Subject 10275 CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*VFARDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*AYLFMDDFKQA 10529
Range 8: 10596 to 10766 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
130.7 bits(279) | 0.0 | 56/57(98%) | 0/57(0%) | Minus/Plus |
Query 3 PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYFE 173 PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVY E Subject 10596 PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVE 10766
Range 9: 10273 to 10479 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
161.4 bits(346) | 0.0 | 66/69(96%) | 0/69(0%) | Plus/Minus |
Query 290 HDSTFALHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKESS*F*RSVIYDNT 496 HD+TFA HEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKE+S*F*RSVIYDNT Subject 10273 HDTTFAQHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKENS*F*RSVIYDNT 10479
Range 10: 10580 to 10768 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.0 bits(308) | 0.0 | 62/63(98%) | 0/63(0%) | Plus/Minus |
Query 1 VSK*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR 189 VS *TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR Subject 10580 VST*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR 10768
Grapevine leafroll associated virus 3 isolate Cl 766, complete genome
Sequence ID: EU344893.1 Length: 17919 Number of Matches: 10
Range 1: 9695 to 10189 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
361.2 bits(782) | 0.0 | 159/165(96%) | 0/165(0%) | Minus/Plus |
Query 1 VLSYMTLRQNYELSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSCRAKVES*FYIEVGVFVYGRF*TGNTVASSRFCLRDNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIWGQRLYSCGR*CLL*N 495 VLSYMTLRQNYE SFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC AKV S*FYIEVGVFVYGRF*TGNTVASSRFCL DNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPI GQRLYSCGR*CL *N Subject 9695 VLSYMTLRQNYEFSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC*AKVVS*FYIEVGVFVYGRF*TGNTVASSRFCLCDNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIRGQRLYSCGR*CLR*N 10189
Range 2: 9695 to 9949 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
195.8 bits(421) | 0.0 | 83/85(98%) | 0/85(0%) | Plus/Minus |
Query 241 ACLKSSINKYAYFNIKSRFYLRSARRSFAWRLPRFLF*GELVLSQSRAKAYLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH 495 ACLKSSINKYAYFNIKSR+YLRSARRSFAWRLPRFLF*GELVLSQSRAK YLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH Subject 9695 ACLKSSINKYAYFNIKSRYYLRSARRSFAWRLPRFLF*GELVLSQSRAKTYLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH 9949
Range 3: 9949 to 10188 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
184.4 bits(396) | 0.0 | 77/80(96%) | 0/80(0%) | Plus/Minus |
Query 2 FQSKHYRPQEYNR*PQMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELSRRQNRLLATVL 241 FQ KHYRPQEYNR*P+MGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELS+RQNRLLATVL Subject 9949 FQRKHYRPQEYNR*PRMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELSQRQNRLLATVL 10188
Range 4: 9697 to 10188 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
358.9 bits(777) | 0.0 | 158/164(96%) | 0/164(0%) | Minus/Plus |
Query 2 VVVYDATSKL*TFLRVGVVECVHRR*TRFSGDINRLLREIGIERVRLKREIGEGATRMIFVQSEGRIVILY*SRRICLWTILNRQYCC**SILSS**FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLK 493 VVVYDATSKL* FLRVGVVECVHRR*TRFSGDINR LREIGIERVRLKREIGEGATRMIFV SEG IVILY*SRRICLWTILNRQYCC**SILS **FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPH GSAVVLLWPVVFTLK Subject 9697 VVVYDATSKL*IFLRVGVVECVHRR*TRFSGDINRFLREIGIERVRLKREIGEGATRMIFVLSEGSIVILY*SRRICLWTILNRQYCC**SILSL**FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHPGSAVVLLWPVVFTLK 10188
Range 5: 9774 to 10187 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
321.4 bits(695) | 0.0 | 133/138(96%) | 0/138(0%) | Plus/Minus |
Query 3 FKVNTTGHRSTTADPRWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYHEDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLCTKIIRVAPSPISLLRRTRSIPISRKSLFMSPLNLV 416 F VNTTGHRSTTADP WGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYH+DKIDY*QQYCLFKIVHKQIRLLQYKITILPSL TKIIRVAPSPISLLRRTRSIPISRK+LFMSPLNLV Subject 9774 FNVNTTGHRSTTADPGWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYHKDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLSTKIIRVAPSPISLLRRTRSIPISRKNLFMSPLNLV 10187
Range 6: 9696 to 9734 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
34.1 bits(68) | 0.0 | 12/13(92%) | 0/13(0%) | Plus/Minus |
Query 456 KVHNFDVASYTTT 494 K+HNFDVASYTTT Subject 9696 KIHNFDVASYTTT 9734
Range 7: 9696 to 9950 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.4 bits(418) | 0.0 | 83/85(98%) | 0/85(0%) | Minus/Plus |
Query 240 CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*AFARDWDRTSSP*KRNRGRRHANDLRAERR*NRDFILK*AYLFMDDFKQA 494 CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK* FARDWDRTSSP*KRNRGRRHANDLRAERR* RDFILK*AYLFMDDFKQA Subject 9696 CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*VFARDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*AYLFMDDFKQA 9950
Range 8: 10017 to 10187 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
130.7 bits(279) | 0.0 | 56/57(98%) | 0/57(0%) | Minus/Plus |
Query 3 PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYFE 173 PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVY E Subject 10017 PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVE 10187
Range 9: 9694 to 9900 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
161.4 bits(346) | 0.0 | 66/69(96%) | 0/69(0%) | Plus/Minus |
Query 290 HDSTFALHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKESS*F*RSVIYDNT 496 HD+TFA HEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKE+S*F*RSVIYDNT Subject 9694 HDTTFAQHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKENS*F*RSVIYDNT 9900
Range 10: 10001 to 10189 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.0 bits(308) | 0.0 | 62/63(98%) | 0/63(0%) | Plus/Minus |
Query 1 VSK*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR 189 VS *TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR Subject 10001 VST*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR 10189
Nucleotide Sequence (488 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
354.8 | 2047.3 | 27% | 4.283e-96 | 98% | JX559645.1 | |
354.8 | 2047.3 | 27% | 4.283e-96 | 98% | GQ352631.1 | |
354.8 | 2047.3 | 27% | 4.283e-96 | 98% | GU983863.1 | |
354.8 | 2047.3 | 27% | 4.283e-96 | 98% | EU344893.1 | |
354.8 | 2036.7 | 27% | 4.283e-96 | 97% | KX756669.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 6
Range 1: 12751 to 13203 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
354.8 bits(768) | 0.0 | 150/151(99%) | 0/151(0%) | Plus/Minus |
Query 6 KGVE*LYRHIRF*VFNTPGCVLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTL*ILRYVHILPY 458 KGVE*LYRHIRF*VFNTPGCVLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRT *ILRYVHILPY Subject 12751 KGVE*LYRHIRF*VFNTPGCVLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPY 13203
Range 2: 12751 to 13203 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
352.1 bits(762) | 0.0 | 150/151(99%) | 0/151(0%) | Minus/Plus |
Query 6 VGKYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYAADSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGGIKDLKPYVPIESFDPF 458 VGKYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYA DSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGGIKDLKPYVPIESFDPF Subject 12751 VGKYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGGIKDLKPYVPIESFDPF 13203
Range 3: 12750 to 13205 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
345.6 bits(748) | 0.0 | 150/152(99%) | 0/152(0%) | Minus/Plus |
Query 4 GREVCGRNAEFREYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRCRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTVCAYRVIRPLS 459 GREVCGRNAEFR+YDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIR RLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTVCAYRVIRPLS Subject 12750 GREVCGRNAEFRKYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTVCAYRVIRPLS 13205
Range 4: 12750 to 13202 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
343.8 bits(744) | 0.0 | 150/151(99%) | 0/151(0%) | Plus/Minus |
Query 7 KGSNDSIGTYGFKSLIPPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESAAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYFPT 459 KGSNDSIGTYGFKSLIPPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIES AYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYFPT Subject 12750 KGSNDSIGTYGFKSLIPPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYFPT 13202
Range 5: 12746 to 13204 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
332.4 bits(719) | 0.0 | 150/153(98%) | 0/153(0%) | Plus/Minus |
Query 5 ERGRMTL*AHTVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SRQRMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYSLNSALRPHTSLPK 463 ERGRMTL*AHTVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSY LNSALRPHTSLP+ Subject 12746 ERGRMTL*AHTVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYFLNSALRPHTSLPE 13204
Range 6: 12806 to 13204 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
318.6 bits(689) | 0.0 | 133/133(100%) | 0/133(0%) | Minus/Plus |
Query 5 KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTHPGVLKT*NRMCL*SHSTPF 403 KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTHPGVLKT*NRMCL*SHSTPF Subject 12806 KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTHPGVLKT*NRMCL*SHSTPF 13204
Grapevine leafroll associated virus 3 isolate 621, complete genome
Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 6
Range 1: 12751 to 13203 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
354.8 bits(768) | 0.0 | 150/151(99%) | 0/151(0%) | Plus/Minus |
Query 6 KGVE*LYRHIRF*VFNTPGCVLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTL*ILRYVHILPY 458 KGVE*LYRHIRF*VFNTPGCVLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRT *ILRYVHILPY Subject 12751 KGVE*LYRHIRF*VFNTPGCVLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPY 13203
Range 2: 12751 to 13203 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
352.1 bits(762) | 0.0 | 150/151(99%) | 0/151(0%) | Minus/Plus |
Query 6 VGKYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYAADSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGGIKDLKPYVPIESFDPF 458 VGKYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYA DSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGGIKDLKPYVPIESFDPF Subject 12751 VGKYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGGIKDLKPYVPIESFDPF 13203
Range 3: 12750 to 13205 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
345.6 bits(748) | 0.0 | 150/152(99%) | 0/152(0%) | Minus/Plus |
Query 4 GREVCGRNAEFREYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRCRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTVCAYRVIRPLS 459 GREVCGRNAEFR+YDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIR RLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTVCAYRVIRPLS Subject 12750 GREVCGRNAEFRKYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTVCAYRVIRPLS 13205
Range 4: 12750 to 13202 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
343.8 bits(744) | 0.0 | 150/151(99%) | 0/151(0%) | Plus/Minus |
Query 7 KGSNDSIGTYGFKSLIPPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESAAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYFPT 459 KGSNDSIGTYGFKSLIPPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIES AYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYFPT Subject 12750 KGSNDSIGTYGFKSLIPPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYFPT 13202
Range 5: 12746 to 13204 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
332.4 bits(719) | 0.0 | 150/153(98%) | 0/153(0%) | Plus/Minus |
Query 5 ERGRMTL*AHTVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SRQRMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYSLNSALRPHTSLPK 463 ERGRMTL*AHTVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSY LNSALRPHTSLP+ Subject 12746 ERGRMTL*AHTVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYFLNSALRPHTSLPE 13204
Range 6: 12806 to 13204 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
318.6 bits(689) | 0.0 | 133/133(100%) | 0/133(0%) | Minus/Plus |
Query 5 KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTHPGVLKT*NRMCL*SHSTPF 403 KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTHPGVLKT*NRMCL*SHSTPF Subject 12806 KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTHPGVLKT*NRMCL*SHSTPF 13204
Grapevine leafroll associated virus 3 isolate WA MR, complete genome
Sequence ID: GU983863.1 Length: 18498 Number of Matches: 6
Range 1: 12751 to 13203 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
354.8 bits(768) | 0.0 | 150/151(99%) | 0/151(0%) | Plus/Minus |
Query 6 KGVE*LYRHIRF*VFNTPGCVLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTL*ILRYVHILPY 458 KGVE*LYRHIRF*VFNTPGCVLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRT *ILRYVHILPY Subject 12751 KGVE*LYRHIRF*VFNTPGCVLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPY 13203
Range 2: 12751 to 13203 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
352.1 bits(762) | 0.0 | 150/151(99%) | 0/151(0%) | Minus/Plus |
Query 6 VGKYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYAADSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGGIKDLKPYVPIESFDPF 458 VGKYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYA DSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGGIKDLKPYVPIESFDPF Subject 12751 VGKYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGGIKDLKPYVPIESFDPF 13203
Range 3: 12750 to 13205 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
345.6 bits(748) | 0.0 | 150/152(99%) | 0/152(0%) | Minus/Plus |
Query 4 GREVCGRNAEFREYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRCRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTVCAYRVIRPLS 459 GREVCGRNAEFR+YDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIR RLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTVCAYRVIRPLS Subject 12750 GREVCGRNAEFRKYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTVCAYRVIRPLS 13205
Range 4: 12750 to 13202 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
343.8 bits(744) | 0.0 | 150/151(99%) | 0/151(0%) | Plus/Minus |
Query 7 KGSNDSIGTYGFKSLIPPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESAAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYFPT 459 KGSNDSIGTYGFKSLIPPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIES AYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYFPT Subject 12750 KGSNDSIGTYGFKSLIPPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYFPT 13202
Range 5: 12746 to 13204 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
332.4 bits(719) | 0.0 | 150/153(98%) | 0/153(0%) | Plus/Minus |
Query 5 ERGRMTL*AHTVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SRQRMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYSLNSALRPHTSLPK 463 ERGRMTL*AHTVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSY LNSALRPHTSLP+ Subject 12746 ERGRMTL*AHTVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYFLNSALRPHTSLPE 13204
Range 6: 12806 to 13204 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
318.6 bits(689) | 0.0 | 133/133(100%) | 0/133(0%) | Minus/Plus |
Query 5 KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTHPGVLKT*NRMCL*SHSTPF 403 KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTHPGVLKT*NRMCL*SHSTPF Subject 12806 KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTHPGVLKT*NRMCL*SHSTPF 13204
Grapevine leafroll associated virus 3 isolate Cl 766, complete genome
Sequence ID: EU344893.1 Length: 17919 Number of Matches: 6
Range 1: 12172 to 12624 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
354.8 bits(768) | 0.0 | 150/151(99%) | 0/151(0%) | Plus/Minus |
Query 6 KGVE*LYRHIRF*VFNTPGCVLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTL*ILRYVHILPY 458 KGVE*LYRHIRF*VFNTPGCVLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRT *ILRYVHILPY Subject 12172 KGVE*LYRHIRF*VFNTPGCVLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPY 12624
Range 2: 12172 to 12624 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
352.1 bits(762) | 0.0 | 150/151(99%) | 0/151(0%) | Minus/Plus |
Query 6 VGKYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYAADSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGGIKDLKPYVPIESFDPF 458 VGKYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYA DSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGGIKDLKPYVPIESFDPF Subject 12172 VGKYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGGIKDLKPYVPIESFDPF 12624
Range 3: 12171 to 12626 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
345.6 bits(748) | 0.0 | 150/152(99%) | 0/152(0%) | Minus/Plus |
Query 4 GREVCGRNAEFREYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRCRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTVCAYRVIRPLS 459 GREVCGRNAEFR+YDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIR RLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTVCAYRVIRPLS Subject 12171 GREVCGRNAEFRKYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTVCAYRVIRPLS 12626
Range 4: 12171 to 12623 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
343.8 bits(744) | 0.0 | 150/151(99%) | 0/151(0%) | Plus/Minus |
Query 7 KGSNDSIGTYGFKSLIPPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESAAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYFPT 459 KGSNDSIGTYGFKSLIPPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIES AYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYFPT Subject 12171 KGSNDSIGTYGFKSLIPPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYFPT 12623
Range 5: 12167 to 12625 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
332.4 bits(719) | 0.0 | 150/153(98%) | 0/153(0%) | Plus/Minus |
Query 5 ERGRMTL*AHTVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SRQRMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYSLNSALRPHTSLPK 463 ERGRMTL*AHTVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSY LNSALRPHTSLP+ Subject 12167 ERGRMTL*AHTVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYFLNSALRPHTSLPE 12625
Range 6: 12227 to 12625 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
318.6 bits(689) | 0.0 | 133/133(100%) | 0/133(0%) | Minus/Plus |
Query 5 KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTHPGVLKT*NRMCL*SHSTPF 403 KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTHPGVLKT*NRMCL*SHSTPF Subject 12227 KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTHPGVLKT*NRMCL*SHSTPF 12625
Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome
Sequence ID: KX756669.1 Length: 18313 Number of Matches: 6
Range 1: 12566 to 13018 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
354.8 bits(768) | 0.0 | 150/151(99%) | 0/151(0%) | Plus/Minus |
Query 6 KGVE*LYRHIRF*VFNTPGCVLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTL*ILRYVHILPY 458 KGVE*LYRHIRF*VFNTPGCVLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRT *ILRYVHILPY Subject 12566 KGVE*LYRHIRF*VFNTPGCVLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPY 13018
Range 2: 12566 to 13018 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
350.2 bits(758) | 0.0 | 149/151(99%) | 0/151(0%) | Minus/Plus |
Query 6 VGKYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYAADSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGGIKDLKPYVPIESFDPF 458 VGKYVDVTQNLES+IVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYA DSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGGIKDLKPYVPIESFDPF Subject 12566 VGKYVDVTQNLESSIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGGIKDLKPYVPIESFDPF 13018
Range 3: 12565 to 13020 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
343.8 bits(744) | 0.0 | 149/152(98%) | 0/152(0%) | Minus/Plus |
Query 4 GREVCGRNAEFREYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRCRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTVCAYRVIRPLS 459 GREVCGRNAEFR++DRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIR RLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTVCAYRVIRPLS Subject 12565 GREVCGRNAEFRKFDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTVCAYRVIRPLS 13020
Range 4: 12565 to 13017 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
341.1 bits(738) | 0.0 | 149/151(99%) | 0/151(0%) | Plus/Minus |
Query 7 KGSNDSIGTYGFKSLIPPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESAAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYFPT 459 KGSNDSIGTYGFKSLIPPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIES AYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTI LSKFCVTSTYFPT Subject 12565 KGSNDSIGTYGFKSLIPPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIELSKFCVTSTYFPT 13017
Range 5: 12561 to 13019 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
328.2 bits(710) | 0.0 | 149/153(97%) | 0/153(0%) | Plus/Minus |
Query 5 ERGRMTL*AHTVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SRQRMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYSLNSALRPHTSLPK 463 ERGRMTL*AHTVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARS LNSALRPHTSLP+ Subject 12561 ERGRMTL*AHTVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSNFLNSALRPHTSLPE 13019
Range 6: 12621 to 13019 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
318.6 bits(689) | 0.0 | 133/133(100%) | 0/133(0%) | Minus/Plus |
Query 5 KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTHPGVLKT*NRMCL*SHSTPF 403 KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTHPGVLKT*NRMCL*SHSTPF Subject 12621 KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTHPGVLKT*NRMCL*SHSTPF 13019
Nucleotide Sequence (499 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
380.9 | 2083.2 | 32% | 6.101e-104 | 96% | JX559645.1 | |
380.9 | 2083.6 | 32% | 6.101e-104 | 96% | GQ352631.1 | |
380.9 | 2080.4 | 32% | 6.101e-104 | 96% | EU344893.1 | |
379.5 | 2079.0 | 32% | 1.582e-103 | 96% | KX756669.1 | |
378.6 | 2083.2 | 32% | 2.986e-103 | 96% | GU983863.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 7
Range 1: 2517 to 3005 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
380.9 bits(825) | 0.0 | 159/163(98%) | 0/163(0%) | Minus/Plus |
Query 10 VYDISPQQVAEAMDKKGALAFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYNAQT 498 VYDISPQQVAEAMDKKGAL FDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSY T Subject 2517 VYDISPQQVAEAMDKKGALVFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNT 3005
Range 2: 2517 to 2993 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
368.6 bits(798) | 0.0 | 157/159(99%) | 0/159(0%) | Plus/Minus |
Query 22 VGIDPVDKIRIEDYRLEGHTRTSYNRYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IECQRTLLIHSLCHLLRGYIVH 498 VGIDPVDKIRIEDYRLEG+TRTSYNRYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IE QRTLLIHSLCHLLRGYIVH Subject 2517 VGIDPVDKIRIEDYRLEGYTRTSYNRYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IEYQRTLLIHSLCHLLRGYIVH 2993
Range 3: 2516 to 3013 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
364.4 bits(789) | 0.0 | 160/166(96%) | 0/166(0%) | Plus/Minus |
Query 2 VGCVWAL*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNANAPFLSIASATCCGDISYT 499 V V + *E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSN NAPFLSIASATCCGDISYT Subject 2516 VPMVLSA*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNTNAPFLSIASATCCGDISYT 3013
Range 4: 2516 to 2995 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
342.9 bits(742) | 0.0 | 158/160(99%) | 0/160(0%) | Minus/Plus |
Query 20 CVRYIPAAXXXXXXXXXXXGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTCCSWF*CVLQDDSPRFGFCRQDLFLQ 499 CVRYIPAAGGRGYG*EGCVGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTCCSWF*C+LQDDSPRFGFCRQDLFL+ Subject 2516 CVRYIPAAGGRGYG*EGCVGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTCCSWF*CILQDDSPRFGFCRQDLFLR 2995
Range 5: 2518 to 2910 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
330.5 bits(715) | 0.0 | 130/131(99%) | 0/131(0%) | Minus/Plus |
Query 105 CTIYPRSRWQRLWIRRVRWHSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRWC 497 CTIYPRSRWQRLWIRRVRW+SI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRWC Subject 2518 CTIYPRSRWQRLWIRRVRWYSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRWC 2910
Range 6: 2779 to 2991 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
163.3 bits(350) | 0.0 | 70/71(99%) | 0/71(0%) | Plus/Minus |
Query 24 RNRSCRQNPNRGLSS*RTH*NQLQQV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T 236 RNRSCRQNPNRGLSS*R H*NQLQQV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T Subject 2779 RNRSCRQNPNRGLSS*RIH*NQLQQV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T 2991
Range 7: 2518 to 2718 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.6 bits(283) | 0.0 | 66/67(99%) | 0/67(0%) | Plus/Minus |
Query 297 NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNRMXXXXXXXXXXXXAAGIYRT 497 NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNR+PTHPSYP*PLPPAAGIYRT Subject 2518 NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNRIPTHPSYP*PLPPAAGIYRT 2718
Grapevine leafroll associated virus 3 isolate 621, complete genome
Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 7
Range 1: 2517 to 3005 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
380.9 bits(825) | 0.0 | 159/163(98%) | 0/163(0%) | Minus/Plus |
Query 10 VYDISPQQVAEAMDKKGALAFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYNAQT 498 VYDISPQQVAEAMDKKGAL FDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSY T Subject 2517 VYDISPQQVAEAMDKKGALVFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNT 3005
Range 2: 2517 to 2993 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
367.2 bits(795) | 0.0 | 157/159(99%) | 0/159(0%) | Plus/Minus |
Query 22 VGIDPVDKIRIEDYRLEGHTRTSYNRYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IECQRTLLIHSLCHLLRGYIVH 498 VGIDPVDKIRI DYRLEGHTRTSYNRYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IE QRTLLIHSLCHLLRGYIVH Subject 2517 VGIDPVDKIRI*DYRLEGHTRTSYNRYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IEYQRTLLIHSLCHLLRGYIVH 2993
Range 3: 2516 to 3013 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
364.4 bits(789) | 0.0 | 160/166(96%) | 0/166(0%) | Plus/Minus |
Query 2 VGCVWAL*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNANAPFLSIASATCCGDISYT 499 V V + *E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSN NAPFLSIASATCCGDISYT Subject 2516 VPMVLSA*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNTNAPFLSIASATCCGDISYT 3013
Range 4: 2516 to 2995 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
343.3 bits(743) | 0.0 | 159/160(99%) | 0/160(0%) | Minus/Plus |
Query 20 CVRYIPAAXXXXXXXXXXXGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTCCSWF*CVLQDDSPRFGFCRQDLFLQ 499 CVRYIPAAGGRGYG*EGCVGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTCCSWF*CVLQDDSPRFGFCRQDLFL+ Subject 2516 CVRYIPAAGGRGYG*EGCVGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTCCSWF*CVLQDDSPRFGFCRQDLFLR 2995
Range 5: 2518 to 2943 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
332.4 bits(719) | 0.0 | 141/142(99%) | 0/142(0%) | Minus/Plus |
Query 72 CTIYPRSRWQRLWIRRVRWHSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRWCXXXXXXXXVCP 497 CTIYPRSRWQRLWIRRVRW+SI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRWCLYLL*LVLVCP Subject 2518 CTIYPRSRWQRLWIRRVRWYSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRWCLYLL*LVLVCP 2943
Range 6: 2779 to 2991 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
162.8 bits(349) | 0.0 | 70/71(99%) | 0/71(0%) | Plus/Minus |
Query 24 RNRSCRQNPNRGLSS*RTH*NQLQQV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T 236 RNRSCRQNPN GLSS*RTH*NQLQQV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T Subject 2779 RNRSCRQNPNLGLSS*RTH*NQLQQV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T 2991
Range 7: 2518 to 2718 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.6 bits(283) | 0.0 | 66/67(99%) | 0/67(0%) | Plus/Minus |
Query 297 NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNRMXXXXXXXXXXXXAAGIYRT 497 NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNR+PTHPSYP*PLPPAAGIYRT Subject 2518 NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNRIPTHPSYP*PLPPAAGIYRT 2718
Grapevine leafroll associated virus 3 isolate Cl 766, complete genome
Sequence ID: EU344893.1 Length: 17919 Number of Matches: 7
Range 1: 1938 to 2426 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
380.9 bits(825) | 0.0 | 159/163(98%) | 0/163(0%) | Minus/Plus |
Query 10 VYDISPQQVAEAMDKKGALAFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYNAQT 498 VYDISPQQVAEAMDKKGAL FDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSY T Subject 1938 VYDISPQQVAEAMDKKGALVFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNT 2426
Range 2: 1938 to 2414 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
368.1 bits(797) | 0.0 | 157/159(99%) | 0/159(0%) | Plus/Minus |
Query 22 VGIDPVDKIRIEDYRLEGHTRTSYNRYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IECQRTLLIHSLCHLLRGYIVH 498 VGIDPVDKIRIEDYRLEGHTRTSYN YKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IE QRTLLIHSLCHLLRGYIVH Subject 1938 VGIDPVDKIRIEDYRLEGHTRTSYNGYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IEYQRTLLIHSLCHLLRGYIVH 2414
Range 3: 1937 to 2434 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
364.4 bits(789) | 0.0 | 160/166(96%) | 0/166(0%) | Plus/Minus |
Query 2 VGCVWAL*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNANAPFLSIASATCCGDISYT 499 V V + *E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSN NAPFLSIASATCCGDISYT Subject 1937 VPMVLSA*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNTNAPFLSIASATCCGDISYT 2434
Range 4: 1937 to 2416 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
337.9 bits(731) | 0.0 | 158/160(99%) | 0/160(0%) | Minus/Plus |
Query 20 CVRYIPAAXXXXXXXXXXXGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTCCSWF*CVLQDDSPRFGFCRQDLFLQ 499 CVRYIPAAGGRGYG*EGCVGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYT CSWF*CVLQDDSPRFGFCRQDLFL+ Subject 1937 CVRYIPAAGGRGYG*EGCVGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTRCSWF*CVLQDDSPRFGFCRQDLFLR 2416
Range 5: 1939 to 2364 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
332.4 bits(719) | 0.0 | 140/142(99%) | 0/142(0%) | Minus/Plus |
Query 72 CTIYPRSRWQRLWIRRVRWHSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRWCXXXXXXXXVCP 497 CTIYPRSRWQRLWIRRVRW+SI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRWCLY L*LVLVCP Subject 1939 CTIYPRSRWQRLWIRRVRWYSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRWCLYPL*LVLVCP 2364
Range 6: 2200 to 2412 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
164.2 bits(352) | 0.0 | 70/71(99%) | 0/71(0%) | Plus/Minus |
Query 24 RNRSCRQNPNRGLSS*RTH*NQLQQV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T 236 RNRSCRQNPNRGLSS*RTH*NQLQ+V*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T Subject 2200 RNRSCRQNPNRGLSS*RTH*NQLQRV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T 2412
Range 7: 1939 to 2139 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.6 bits(283) | 0.0 | 66/67(99%) | 0/67(0%) | Plus/Minus |
Query 297 NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNRMXXXXXXXXXXXXAAGIYRT 497 NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNR+PTHPSYP*PLPPAAGIYRT Subject 1939 NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNRIPTHPSYP*PLPPAAGIYRT 2139
Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome
Sequence ID: KX756669.1 Length: 18313 Number of Matches: 7
Range 1: 2332 to 2820 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
379.5 bits(822) | 0.0 | 158/163(97%) | 0/163(0%) | Minus/Plus |
Query 10 VYDISPQQVAEAMDKKGALAFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYNAQT 498 VYDISPQQVAEAMDKKGAL FDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNV+KLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSY T Subject 2332 VYDISPQQVAEAMDKKGALVFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVYKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNT 2820
Range 2: 2332 to 2808 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
367.6 bits(796) | 0.0 | 157/159(99%) | 0/159(0%) | Plus/Minus |
Query 22 VGIDPVDKIRIEDYRLEGHTRTSYNRYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IECQRTLLIHSLCHLLRGYIVH 498 VGIDPVDKIRIEDYRLEGHTRTSYNRYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKL HVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IE QRTLLIHSLCHLLRGYIVH Subject 2332 VGIDPVDKIRIEDYRLEGHTRTSYNRYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLIHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IEYQRTLLIHSLCHLLRGYIVH 2808
Range 3: 2331 to 2828 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
360.8 bits(781) | 0.0 | 159/166(96%) | 0/166(0%) | Plus/Minus |
Query 2 VGCVWAL*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNANAPFLSIASATCCGDISYT 499 V V + *E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSL TFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSN NAPFLSIASATCCGDISYT Subject 2331 VPMVLSA*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLYTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNTNAPFLSIASATCCGDISYT 2828
Range 4: 2331 to 2810 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
343.3 bits(743) | 0.0 | 159/160(99%) | 0/160(0%) | Minus/Plus |
Query 20 CVRYIPAAXXXXXXXXXXXGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTCCSWF*CVLQDDSPRFGFCRQDLFLQ 499 CVRYIPAAGGRGYG*EGCVGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTCCSWF*CVLQDDSPRFGFCRQDLFL+ Subject 2331 CVRYIPAAGGRGYG*EGCVGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTCCSWF*CVLQDDSPRFGFCRQDLFLR 2810
Range 5: 2333 to 2758 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
331.4 bits(717) | 0.0 | 140/142(99%) | 0/142(0%) | Minus/Plus |
Query 72 CTIYPRSRWQRLWIRRVRWHSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRWCXXXXXXXXVCP 497 CTIYPRSRWQRLWIRRVRW+SI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTC+SLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRWCLYLL*LVLVCP Subject 2333 CTIYPRSRWQRLWIRRVRWYSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCISLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRWCLYLL*LVLVCP 2758
Range 6: 2594 to 2806 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
163.7 bits(351) | 0.0 | 70/71(99%) | 0/71(0%) | Plus/Minus |
Query 24 RNRSCRQNPNRGLSS*RTH*NQLQQV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T 236 RNRSCRQNPNRGLSS*RTH*NQLQQV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA T Subject 2594 RNRSCRQNPNRGLSS*RTH*NQLQQV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQAYT 2806
Range 7: 2333 to 2533 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.6 bits(283) | 0.0 | 66/67(99%) | 0/67(0%) | Plus/Minus |
Query 297 NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNRMXXXXXXXXXXXXAAGIYRT 497 NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNR+PTHPSYP*PLPPAAGIYRT Subject 2333 NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNRIPTHPSYP*PLPPAAGIYRT 2533
Grapevine leafroll associated virus 3 isolate WA MR, complete genome
Sequence ID: GU983863.1 Length: 18498 Number of Matches: 7
Range 1: 2517 to 3005 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
378.6 bits(820) | 0.0 | 158/163(97%) | 0/163(0%) | Minus/Plus |
Query 10 VYDISPQQVAEAMDKKGALAFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYNAQT 498 VYDISPQQVAEAMDKKGAL FDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVR SSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSY T Subject 2517 VYDISPQQVAEAMDKKGALVFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRASSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNT 3005
Range 2: 2517 to 2993 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
371.3 bits(804) | 0.0 | 158/159(99%) | 0/159(0%) | Plus/Minus |
Query 22 VGIDPVDKIRIEDYRLEGHTRTSYNRYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IECQRTLLIHSLCHLLRGYIVH 498 VGIDPVDKIRIEDYRLEGHTRTSYNRYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IE QRTLLIHSLCHLLRGYIVH Subject 2517 VGIDPVDKIRIEDYRLEGHTRTSYNRYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IEYQRTLLIHSLCHLLRGYIVH 2993
Range 3: 2516 to 3013 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
362.6 bits(785) | 0.0 | 159/166(96%) | 0/166(0%) | Plus/Minus |
Query 2 VGCVWAL*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNANAPFLSIASATCCGDISYT 499 V V + *E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDE RT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSN NAPFLSIASATCCGDISYT Subject 2516 VPMVLSA*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEART*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNTNAPFLSIASATCCGDISYT 3013
Range 4: 2516 to 2995 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
339.7 bits(735) | 0.0 | 158/160(99%) | 0/160(0%) | Minus/Plus |
Query 20 CVRYIPAAXXXXXXXXXXXGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTCCSWF*CVLQDDSPRFGFCRQDLFLQ 499 CVRYIPAAGGRGYG*EGCVGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRT FIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTCCSWF*CVLQDDSPRFGFCRQDLFL+ Subject 2516 CVRYIPAAGGRGYG*EGCVGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTRFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTCCSWF*CVLQDDSPRFGFCRQDLFLR 2995
Range 5: 2518 to 2943 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
332.4 bits(719) | 0.0 | 141/142(99%) | 0/142(0%) | Minus/Plus |
Query 72 CTIYPRSRWQRLWIRRVRWHSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRWCXXXXXXXXVCP 497 CTIYPRSRWQRLWIRRVRW+SI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRWCLYLL*LVLVCP Subject 2518 CTIYPRSRWQRLWIRRVRWYSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRWCLYLL*LVLVCP 2943
Range 6: 2779 to 2991 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
166.0 bits(356) | 0.0 | 71/71(100%) | 0/71(0%) | Plus/Minus |
Query 24 RNRSCRQNPNRGLSS*RTH*NQLQQV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T 236 RNRSCRQNPNRGLSS*RTH*NQLQQV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T Subject 2779 RNRSCRQNPNRGLSS*RTH*NQLQQV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T 2991
Range 7: 2518 to 2718 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.6 bits(283) | 0.0 | 66/67(99%) | 0/67(0%) | Plus/Minus |
Query 297 NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNRMXXXXXXXXXXXXAAGIYRT 497 NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNR+PTHPSYP*PLPPAAGIYRT Subject 2518 NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNRIPTHPSYP*PLPPAAGIYRT 2718
Nucleotide Sequence (894 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
699.8 | 3885.7 | 30% | 0 | 91% | JX559645.1 | |
699.8 | 3896.7 | 30% | 0 | 91% | GQ352631.1 | |
699.8 | 3891.7 | 30% | 0 | 91% | EU344893.1 | |
699.8 | 3897.7 | 30% | 0 | 91% | KX756669.1 | |
698.5 | 3897.7 | 30% | 0 | 91% | GU983863.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 10
Range 1: 5484 to 6347 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
699.8 bits(1521) | 0.0 | 288/288(100%) | 0/288(0%) | Plus/Plus |
Query 30 SGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPY 893 SGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPY Subject 5484 SGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPY 6347
Range 2: 5482 to 6348 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
658.6 bits(1431) | 0.0 | 286/289(99%) | 0/289(0%) | Plus/Plus |
Query 28 YQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRSHQVFQTSNHRAKVLPEQSHQNRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRGHTGRCLWLEILPSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRT 894 +QGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRSHQVFQTSNHRAKVLPEQSHQN+GARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLT PQ*HLKWLKPGPLKMPSWST*SIWL*ALRGHTGRCLWLEILPSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRT Subject 5482 HQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRSHQVFQTSNHRAKVLPEQSHQNQGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTIPQ*HLKWLKPGPLKMPSWST*SIWL*ALRGHTGRCLWLEILPSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRT 6348
Range 3: 5480 to 6346 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
652.6 bits(1418) | 0.0 | 288/289(100%) | 0/289(0%) | Minus/Minus |
Query 26 YGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDXXXXXXXXXSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDK 892 YGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPD+ Subject 5480 YGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDE 6346
Range 4: 5913 to 6347 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
354.8 bits(768) | 0.0 | 143/145(99%) | 0/145(0%) | Minus/Minus |
Query 459 VR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDGNISSHKQRPVCPLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRFWCDCSGST 893 VR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDGNISSHKQRPVCPLNAYSQILQVLHDGIFRGPGFNHFKCHWG+VRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAP FWCDCSGST Subject 5913 VR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDGNISSHKQRPVCPLNAYSQILQVLHDGIFRGPGFNHFKCHWGIVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAP*FWCDCSGST 6347
Range 5: 5493 to 5870 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
300.3 bits(649) | 0.0 | 126/126(100%) | 0/126(0%) | Minus/Minus |
Query 39 IRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTR 416 IRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTR Subject 5493 IRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTR 5870
Range 6: 5674 to 6348 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
503.7 bits(1093) | 0.0 | 223/225(99%) | 0/225(0%) | Minus/Minus |
Query 220 RTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**RQYF*P*ATPCMSSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLVTSHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT 894 RTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**RQYF*P*ATPCMSSQCL*PDTSSTPRRHLQRSRF*PLQMSLG SQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCP ILV*LFW*HLGSVVAGLEHLVTSHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT Subject 5674 RTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**RQYF*P*ATPCMSSQCL*PDTSSTPRRHLQRSRF*PLQMSLGYSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPLILV*LFW*HLGSVVAGLEHLVTSHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT 6348
Range 7: 5467 to 5628 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
121.1 bits(258) | 0.0 | 49/54(91%) | 0/54(0%) | Minus/Minus |
Query 13 GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLINAQTH 174 GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATL+ H Subject 5467 GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLMKHGYH 5628
Range 8: 5480 to 5935 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
360.3 bits(780) | 0.0 | 152/152(100%) | 0/152(0%) | Plus/Plus |
Query 26 FIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EVTRCSKPATTEPRCYQNNHT 481 FIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EVTRCSKPATTEPRCYQNNHT Subject 5480 FIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EVTRCSKPATTEPRCYQNNHT 5935
Range 9: 5987 to 6229 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
176.6 bits(379) | 0.0 | 80/81(99%) | 0/81(0%) | Plus/Plus |
Query 533 EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*EDIQGVAYG*KYCRHYRRRC 775 EVDILDMVRTRLR*EV*VAQG**SSDGS*T*L+PNDI*SG*NRDL*RCRRGVLEVSGYRH*EDIQGVAYG*KYCRHYRRRC Subject 5987 EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LYPNDI*SG*NRDL*RCRRGVLEVSGYRH*EDIQGVAYG*KYCRHYRRRC 6229
Grapevine leafroll associated virus 3 isolate 621, complete genome
Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 10
Range 1: 5484 to 6347 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
699.8 bits(1521) | 0.0 | 288/288(100%) | 0/288(0%) | Plus/Plus |
Query 30 SGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPY 893 SGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPY Subject 5484 SGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPY 6347
Range 2: 5482 to 6348 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
661.3 bits(1437) | 0.0 | 287/289(99%) | 0/289(0%) | Plus/Plus |
Query 28 YQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRSHQVFQTSNHRAKVLPEQSHQNRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRGHTGRCLWLEILPSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRT 894 +QGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRSHQVFQTSNHRAKVLPEQSHQN+GARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRGHTGRCLWLEILPSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRT Subject 5482 HQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRSHQVFQTSNHRAKVLPEQSHQNQGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRGHTGRCLWLEILPSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRT 6348
Range 3: 5480 to 6346 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
652.6 bits(1418) | 0.0 | 288/289(100%) | 0/289(0%) | Minus/Minus |
Query 26 YGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDXXXXXXXXXSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDK 892 YGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPD+ Subject 5480 YGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDE 6346
Range 4: 5913 to 6347 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
355.3 bits(769) | 0.0 | 144/145(99%) | 0/145(0%) | Minus/Minus |
Query 459 VR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDGNISSHKQRPVCPLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRFWCDCSGST 893 VR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDGNISSHKQRPVCPLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAP FWCDCSGST Subject 5913 VR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDGNISSHKQRPVCPLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAP*FWCDCSGST 6347
Range 5: 5493 to 5870 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
300.3 bits(649) | 0.0 | 126/126(100%) | 0/126(0%) | Minus/Minus |
Query 39 IRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTR 416 IRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTR Subject 5493 IRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTR 5870
Range 6: 5674 to 6348 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
508.8 bits(1104) | 0.0 | 224/225(100%) | 0/225(0%) | Minus/Minus |
Query 220 RTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**RQYF*P*ATPCMSSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLVTSHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT 894 RTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**RQYF*P*ATPCMSSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCP ILV*LFW*HLGSVVAGLEHLVTSHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT Subject 5674 RTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**RQYF*P*ATPCMSSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPLILV*LFW*HLGSVVAGLEHLVTSHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT 6348
Range 7: 5467 to 5628 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
121.1 bits(258) | 0.0 | 49/54(91%) | 0/54(0%) | Minus/Minus |
Query 13 GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLINAQTH 174 GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATL+ H Subject 5467 GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLMKHGYH 5628
Range 8: 5480 to 5935 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
360.3 bits(780) | 0.0 | 152/152(100%) | 0/152(0%) | Plus/Plus |
Query 26 FIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EVTRCSKPATTEPRCYQNNHT 481 FIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EVTRCSKPATTEPRCYQNNHT Subject 5480 FIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EVTRCSKPATTEPRCYQNNHT 5935
Range 9: 5987 to 6229 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
179.3 bits(385) | 0.0 | 81/81(100%) | 0/81(0%) | Plus/Plus |
Query 533 EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*EDIQGVAYG*KYCRHYRRRC 775 EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*EDIQGVAYG*KYCRHYRRRC Subject 5987 EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*EDIQGVAYG*KYCRHYRRRC 6229
Grapevine leafroll associated virus 3 isolate Cl 766, complete genome
Sequence ID: EU344893.1 Length: 17919 Number of Matches: 10
Range 1: 4905 to 5768 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
699.8 bits(1521) | 0.0 | 288/288(100%) | 0/288(0%) | Plus/Plus |
Query 30 SGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPY 893 SGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPY Subject 4905 SGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPY 5768
Range 2: 4903 to 5769 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
661.3 bits(1437) | 0.0 | 287/289(99%) | 0/289(0%) | Plus/Plus |
Query 28 YQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRSHQVFQTSNHRAKVLPEQSHQNRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRGHTGRCLWLEILPSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRT 894 +QGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGR+TSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRSHQVFQTSNHRAKVLPEQSHQNRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRGHTGRCLWLEILPSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRT Subject 4903 HQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRRTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRSHQVFQTSNHRAKVLPEQSHQNRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRGHTGRCLWLEILPSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRT 5769
Range 3: 4901 to 5767 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
651.3 bits(1415) | 0.0 | 287/289(99%) | 0/289(0%) | Minus/Minus |
Query 26 YGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDXXXXXXXXXSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDK 892 YGRSLTR+PSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPD+ Subject 4901 YGRSLTRRPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDE 5767
Range 4: 5334 to 5768 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
359.4 bits(778) | 0.0 | 145/145(100%) | 0/145(0%) | Minus/Minus |
Query 459 VR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDGNISSHKQRPVCPLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRFWCDCSGST 893 VR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDGNISSHKQRPVCPLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRFWCDCSGST Subject 5334 VR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDGNISSHKQRPVCPLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRFWCDCSGST 5768
Range 5: 4914 to 5291 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
294.8 bits(637) | 0.0 | 125/126(99%) | 0/126(0%) | Minus/Minus |
Query 39 IRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTR 416 IRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREV LPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTR Subject 4914 IRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVRLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTR 5291
Range 6: 5095 to 5769 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
511.5 bits(1110) | 0.0 | 224/225(100%) | 0/225(0%) | Minus/Minus |
Query 220 RTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**RQYF*P*ATPCMSSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLVTSHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT 894 RTVGLSHA RLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**RQYF*P*ATPCMSSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLVTSHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT Subject 5095 RTVGLSHAGRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**RQYF*P*ATPCMSSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLVTSHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT 5769
Range 7: 4888 to 5049 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
121.1 bits(258) | 0.0 | 49/54(91%) | 0/54(0%) | Minus/Minus |
Query 13 GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLINAQTH 174 GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATL+ H Subject 4888 GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLMKHGYH 5049
Range 8: 4901 to 5356 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
358.5 bits(776) | 0.0 | 151/152(99%) | 0/152(0%) | Plus/Plus |
Query 26 FIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EVTRCSKPATTEPRCYQNNHT 481 FIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEG+LLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EVTRCSKPATTEPRCYQNNHT Subject 4901 FIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGELLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EVTRCSKPATTEPRCYQNNHT 5356
Range 9: 5408 to 5650 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
179.3 bits(385) | 0.0 | 81/81(100%) | 0/81(0%) | Plus/Plus |
Query 533 EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*EDIQGVAYG*KYCRHYRRRC 775 EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*EDIQGVAYG*KYCRHYRRRC Subject 5408 EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*EDIQGVAYG*KYCRHYRRRC 5650
Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome
Sequence ID: KX756669.1 Length: 18313 Number of Matches: 10
Range 1: 5299 to 6162 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
699.8 bits(1521) | 0.0 | 288/288(100%) | 0/288(0%) | Plus/Plus |
Query 30 SGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPY 893 SGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPY Subject 5299 SGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPY 6162
Range 2: 5297 to 6163 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
660.4 bits(1435) | 0.0 | 287/289(99%) | 0/289(0%) | Plus/Plus |
Query 28 YQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRSHQVFQTSNHRAKVLPEQSHQNRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRGHTGRCLWLEILPSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRT 894 +QGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQI LS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRSHQVFQTSNHRAKVLPEQSHQNRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRGHTGRCLWLEILPSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRT Subject 5297 HQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQIILS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRSHQVFQTSNHRAKVLPEQSHQNRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRGHTGRCLWLEILPSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRT 6163
Range 3: 5295 to 6161 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
652.6 bits(1418) | 0.0 | 288/289(100%) | 0/289(0%) | Minus/Minus |
Query 26 YGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDXXXXXXXXXSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDK 892 YGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPD+ Subject 5295 YGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDE 6161
Range 4: 5728 to 6162 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
359.4 bits(778) | 0.0 | 145/145(100%) | 0/145(0%) | Minus/Minus |
Query 459 VR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDGNISSHKQRPVCPLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRFWCDCSGST 893 VR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDGNISSHKQRPVCPLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRFWCDCSGST Subject 5728 VR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDGNISSHKQRPVCPLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRFWCDCSGST 6162
Range 5: 5308 to 5685 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
299.8 bits(648) | 0.0 | 125/126(99%) | 0/126(0%) | Minus/Minus |
Query 39 IRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTR 416 IRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDR+I*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTR Subject 5308 IRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRII*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTR 5685
Range 6: 5489 to 6163 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
513.3 bits(1114) | 0.0 | 225/225(100%) | 0/225(0%) | Minus/Minus |
Query 220 RTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**RQYF*P*ATPCMSSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLVTSHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT 894 RTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**RQYF*P*ATPCMSSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLVTSHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT Subject 5489 RTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**RQYF*P*ATPCMSSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLVTSHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT 6163
Range 7: 5282 to 5440 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
118.4 bits(252) | 0.0 | 48/53(91%) | 0/53(0%) | Minus/Minus |
Query 13 YLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLINAQTH 171 YLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATL+ H Subject 5282 YLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLMKHGYH 5440
Range 8: 5295 to 5750 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
356.6 bits(772) | 0.0 | 151/152(99%) | 0/152(0%) | Plus/Plus |
Query 26 FIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EVTRCSKPATTEPRCYQNNHT 481 FIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR* YLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EVTRCSKPATTEPRCYQNNHT Subject 5295 FIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*SYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EVTRCSKPATTEPRCYQNNHT 5750
Range 9: 5802 to 6044 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
179.3 bits(385) | 0.0 | 81/81(100%) | 0/81(0%) | Plus/Plus |
Query 533 EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*EDIQGVAYG*KYCRHYRRRC 775 EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*EDIQGVAYG*KYCRHYRRRC Subject 5802 EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*EDIQGVAYG*KYCRHYRRRC 6044
Grapevine leafroll associated virus 3 isolate WA MR, complete genome
Sequence ID: GU983863.1 Length: 18498 Number of Matches: 10
Range 1: 5484 to 6347 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
698.5 bits(1518) | 0.0 | 287/288(100%) | 0/288(0%) | Plus/Plus |
Query 30 SGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPY 893 SGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSG+EVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPY Subject 5484 SGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGKEVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPY 6347
Range 2: 5482 to 6348 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
659.5 bits(1433) | 0.0 | 287/289(99%) | 0/289(0%) | Plus/Plus |
Query 28 YQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRSHQVFQTSNHRAKVLPEQSHQNRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRGHTGRCLWLEILPSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRT 894 +QGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRSHQVFQTSNHRAKVLPEQSHQNRGARLYLREVV KSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRGHTGRCLWLEILPSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRT Subject 5482 HQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRSHQVFQTSNHRAKVLPEQSHQNRGARLYLREVVRKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRGHTGRCLWLEILPSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRT 6348
Range 3: 5480 to 6346 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
652.6 bits(1418) | 0.0 | 288/289(100%) | 0/289(0%) | Minus/Minus |
Query 26 YGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDXXXXXXXXXSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDK 892 YGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPD+ Subject 5480 YGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDE 6346
Range 4: 5913 to 6347 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
354.8 bits(768) | 0.0 | 144/145(99%) | 0/145(0%) | Minus/Minus |
Query 459 VR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDGNISSHKQRPVCPLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRFWCDCSGST 893 VR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDGNISSHKQRPVCPLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDF TTSLR*SLAPRFWCDCSGST Subject 5913 VR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDGNISSHKQRPVCPLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFLTTSLR*SLAPRFWCDCSGST 6347
Range 5: 5493 to 5870 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
300.3 bits(649) | 0.0 | 126/126(100%) | 0/126(0%) | Minus/Minus |
Query 39 IRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTR 416 IRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTR Subject 5493 IRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTR 5870
Range 6: 5674 to 6348 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
513.3 bits(1114) | 0.0 | 225/225(100%) | 0/225(0%) | Minus/Minus |
Query 220 RTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**RQYF*P*ATPCMSSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLVTSHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT 894 RTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**RQYF*P*ATPCMSSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLVTSHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT Subject 5674 RTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**RQYF*P*ATPCMSSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLVTSHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT 6348
Range 7: 5467 to 5628 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
121.1 bits(258) | 0.0 | 49/54(91%) | 0/54(0%) | Minus/Minus |
Query 13 GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLINAQTH 174 GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATL+ H Subject 5467 GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLMKHGYH 5628
Range 8: 5480 to 5935 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
360.3 bits(780) | 0.0 | 152/152(100%) | 0/152(0%) | Plus/Plus |
Query 26 FIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EVTRCSKPATTEPRCYQNNHT 481 FIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EVTRCSKPATTEPRCYQNNHT Subject 5480 FIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EVTRCSKPATTEPRCYQNNHT 5935
Range 9: 5987 to 6229 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
179.3 bits(385) | 0.0 | 81/81(100%) | 0/81(0%) | Plus/Plus |
Query 533 EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*EDIQGVAYG*KYCRHYRRRC 775 EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*EDIQGVAYG*KYCRHYRRRC Subject 5987 EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*EDIQGVAYG*KYCRHYRRRC 6229
Nucleotide Sequence (501 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
352.5 | 1948.4 | 44% | 2.174e-95 | 91% | JX559645.1 | |
352.5 | 1948.4 | 44% | 2.174e-95 | 91% | GQ352631.1 | |
352.5 | 1948.4 | 44% | 2.174e-95 | 91% | AY495340.1 | |
352.5 | 1948.4 | 44% | 2.174e-95 | 91% | KX756669.1 | |
350.2 | 1943.4 | 44% | 7.435e-95 | 91% | GU983863.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 10
Range 1: 8222 to 8698 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
352.5 bits(763) | 0.0 | 158/159(99%) | 0/159(0%) | Plus/Minus |
Query 24 DREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSLFSRRYHTHHKRK*TKLLYQHQXXXXXXXXXXXXEHSEICRTY*YPVHRCSIAGCPPN 500 DREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSS FSRRYHTHHKRK*TKLLYQHQVSRVSTPPPVS*EHSEICRTY*YPVHRCSIAGCPPN Subject 8222 DREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSSFSRRYHTHHKRK*TKLLYQHQVSRVSTPPPVS*EHSEICRTY*YPVHRCSIAGCPPN 8698
Range 2: 8223 to 8630 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
308.1 bits(666) | 0.0 | 135/136(99%) | 0/136(0%) | Minus/Plus |
Query 92 FGGHPAILHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RRENNDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P 499 FGGHPAILHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RREN+DEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P Subject 8223 FGGHPAILHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RRENDDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P 8630
Range 3: 8612 to 8710 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
64.3 bits(134) | 0.0 | 30/33(91%) | 0/33(0%) | Minus/Plus |
Query 12 T*RYLTKLLLIFVLSF*FKSRIVSFLFPIPPNT 110 T*RYLTKLLLIFVLSF*FKSRIVSFLFPI N+ Subject 8612 T*RYLTKLLLIFVLSF*FKSRIVSFLFPIHLNS 8710
Range 4: 8221 to 8706 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
346.6 bits(750) | 0.0 | 161/162(99%) | 0/162(0%) | Minus/Plus |
Query 16 NLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNXXXXXXXXXXXLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPSK 501 NLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNSLVLCTLLSVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDP K Subject 8221 NLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNSLVLCTLLSVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPLK 8706
Range 5: 8221 to 8706 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
308.5 bits(667) | 0.0 | 159/162(98%) | 0/162(0%) | Plus/Minus |
Query 16 FGGIGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQXXXXXXXXLPTKYEAXXXXXXXXXXXXSPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHCSHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQI 501 F IGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQNRRINI*RLPTKYEAIITTNYNITII*SPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRH SHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQI Subject 8221 FKWIGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQNRRINI*RLPTKYEAIITTNYNITII*SPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHRSHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQI 8706
Range 6: 8289 to 8510 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
175.2 bits(376) | 0.0 | 74/74(100%) | 0/74(0%) | Plus/Minus |
Query 212 NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA 433 NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA Subject 8289 NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA 8510
Range 7: 8547 to 8705 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
119.7 bits(255) | 0.0 | 52/53(98%) | 0/53(0%) | Plus/Minus |
Query 17 LEGSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR 175 L GSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR Subject 8547 LSGSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR 8705
Range 8: 8223 to 8249 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
24.4 bits(47) | 0.0 | 9/9(100%) | 0/9(0%) | Plus/Minus |
Query 473 V*YCRMSPK 499 V*YCRMSPK Subject 8223 V*YCRMSPK 8249
Range 9: 8222 to 8509 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.0 bits(489) | 0.0 | 95/96(99%) | 0/96(0%) | Minus/Plus |
Query 213 IWGTSGNTTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*EQ*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD 500 IWGTSGNTTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*E+*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD Subject 8222 IWGTSGNTTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*ER*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD 8509
Grapevine leafroll associated virus 3 isolate 621, complete genome
Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 10
Range 1: 8222 to 8698 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
352.5 bits(763) | 0.0 | 158/159(99%) | 0/159(0%) | Plus/Minus |
Query 24 DREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSLFSRRYHTHHKRK*TKLLYQHQXXXXXXXXXXXXEHSEICRTY*YPVHRCSIAGCPPN 500 DREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSS FSRRYHTHHKRK*TKLLYQHQVSRVSTPPPVS*EHSEICRTY*YPVHRCSIAGCPPN Subject 8222 DREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSSFSRRYHTHHKRK*TKLLYQHQVSRVSTPPPVS*EHSEICRTY*YPVHRCSIAGCPPN 8698
Range 2: 8223 to 8630 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
308.1 bits(666) | 0.0 | 135/136(99%) | 0/136(0%) | Minus/Plus |
Query 92 FGGHPAILHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RRENNDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P 499 FGGHPAILHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RREN+DEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P Subject 8223 FGGHPAILHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RRENDDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P 8630
Range 3: 8612 to 8710 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
64.3 bits(134) | 0.0 | 30/33(91%) | 0/33(0%) | Minus/Plus |
Query 12 T*RYLTKLLLIFVLSF*FKSRIVSFLFPIPPNT 110 T*RYLTKLLLIFVLSF*FKSRIVSFLFPI N+ Subject 8612 T*RYLTKLLLIFVLSF*FKSRIVSFLFPIHLNS 8710
Range 4: 8221 to 8706 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
346.6 bits(750) | 0.0 | 161/162(99%) | 0/162(0%) | Minus/Plus |
Query 16 NLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNXXXXXXXXXXXLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPSK 501 NLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNSLVLCTLLSVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDP K Subject 8221 NLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNSLVLCTLLSVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPLK 8706
Range 5: 8221 to 8706 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
308.5 bits(667) | 0.0 | 159/162(98%) | 0/162(0%) | Plus/Minus |
Query 16 FGGIGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQXXXXXXXXLPTKYEAXXXXXXXXXXXXSPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHCSHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQI 501 F IGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQNRRINI*RLPTKYEAIITTNYNITII*SPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRH SHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQI Subject 8221 FKWIGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQNRRINI*RLPTKYEAIITTNYNITII*SPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHRSHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQI 8706
Range 6: 8289 to 8510 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
175.2 bits(376) | 0.0 | 74/74(100%) | 0/74(0%) | Plus/Minus |
Query 212 NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA 433 NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA Subject 8289 NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA 8510
Range 7: 8547 to 8705 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
119.7 bits(255) | 0.0 | 52/53(98%) | 0/53(0%) | Plus/Minus |
Query 17 LEGSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR 175 L GSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR Subject 8547 LSGSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR 8705
Range 8: 8223 to 8249 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
24.4 bits(47) | 0.0 | 9/9(100%) | 0/9(0%) | Plus/Minus |
Query 473 V*YCRMSPK 499 V*YCRMSPK Subject 8223 V*YCRMSPK 8249
Range 9: 8222 to 8509 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.0 bits(489) | 0.0 | 95/96(99%) | 0/96(0%) | Minus/Plus |
Query 213 IWGTSGNTTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*EQ*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD 500 IWGTSGNTTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*E+*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD Subject 8222 IWGTSGNTTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*ER*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD 8509
Grapevine leafroll associated virus 3 RNA dependent RNA polymerase (RdRp) gene, partial cds
Sequence ID: AY495340.1 Length: 1655 Number of Matches: 10
Range 1: 797 to 1273 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
352.5 bits(763) | 0.0 | 158/159(99%) | 0/159(0%) | Plus/Minus |
Query 24 DREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSLFSRRYHTHHKRK*TKLLYQHQXXXXXXXXXXXXEHSEICRTY*YPVHRCSIAGCPPN 500 DREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSS FSRRYHTHHKRK*TKLLYQHQVSRVSTPPPVS*EHSEICRTY*YPVHRCSIAGCPPN Subject 797 DREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSSFSRRYHTHHKRK*TKLLYQHQVSRVSTPPPVS*EHSEICRTY*YPVHRCSIAGCPPN 1273
Range 2: 798 to 1205 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
308.1 bits(666) | 0.0 | 135/136(99%) | 0/136(0%) | Minus/Plus |
Query 92 FGGHPAILHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RRENNDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P 499 FGGHPAILHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RREN+DEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P Subject 798 FGGHPAILHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RRENDDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P 1205
Range 3: 1187 to 1285 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
64.3 bits(134) | 0.0 | 30/33(91%) | 0/33(0%) | Minus/Plus |
Query 12 T*RYLTKLLLIFVLSF*FKSRIVSFLFPIPPNT 110 T*RYLTKLLLIFVLSF*FKSRIVSFLFPI N+ Subject 1187 T*RYLTKLLLIFVLSF*FKSRIVSFLFPIHLNS 1285
Range 4: 796 to 1281 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
346.6 bits(750) | 0.0 | 161/162(99%) | 0/162(0%) | Minus/Plus |
Query 16 NLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNXXXXXXXXXXXLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPSK 501 NLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNSLVLCTLLSVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDP K Subject 796 NLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNSLVLCTLLSVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPLK 1281
Range 5: 796 to 1281 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
308.5 bits(667) | 0.0 | 159/162(98%) | 0/162(0%) | Plus/Minus |
Query 16 FGGIGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQXXXXXXXXLPTKYEAXXXXXXXXXXXXSPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHCSHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQI 501 F IGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQNRRINI*RLPTKYEAIITTNYNITII*SPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRH SHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQI Subject 796 FKWIGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQNRRINI*RLPTKYEAIITTNYNITII*SPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHRSHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQI 1281
Range 6: 864 to 1085 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
175.2 bits(376) | 0.0 | 74/74(100%) | 0/74(0%) | Plus/Minus |
Query 212 NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA 433 NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA Subject 864 NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA 1085
Range 7: 1122 to 1280 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
119.7 bits(255) | 0.0 | 52/53(98%) | 0/53(0%) | Plus/Minus |
Query 17 LEGSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR 175 L GSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR Subject 1122 LSGSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR 1280
Range 8: 798 to 824 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
24.4 bits(47) | 0.0 | 9/9(100%) | 0/9(0%) | Plus/Minus |
Query 473 V*YCRMSPK 499 V*YCRMSPK Subject 798 V*YCRMSPK 824
Range 9: 797 to 1084 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.0 bits(489) | 0.0 | 95/96(99%) | 0/96(0%) | Minus/Plus |
Query 213 IWGTSGNTTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*EQ*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD 500 IWGTSGNTTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*E+*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD Subject 797 IWGTSGNTTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*ER*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD 1084
Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome
Sequence ID: KX756669.1 Length: 18313 Number of Matches: 10
Range 1: 8037 to 8513 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
352.5 bits(763) | 0.0 | 158/159(99%) | 0/159(0%) | Plus/Minus |
Query 24 DREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSLFSRRYHTHHKRK*TKLLYQHQXXXXXXXXXXXXEHSEICRTY*YPVHRCSIAGCPPN 500 DREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSS FSRRYHTHHKRK*TKLLYQHQVSRVSTPPPVS*EHSEICRTY*YPVHRCSIAGCPPN Subject 8037 DREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSSFSRRYHTHHKRK*TKLLYQHQVSRVSTPPPVS*EHSEICRTY*YPVHRCSIAGCPPN 8513
Range 2: 8038 to 8445 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
308.1 bits(666) | 0.0 | 135/136(99%) | 0/136(0%) | Minus/Plus |
Query 92 FGGHPAILHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RRENNDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P 499 FGGHPAILHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RREN+DEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P Subject 8038 FGGHPAILHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RRENDDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P 8445
Range 3: 8427 to 8525 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
64.3 bits(134) | 0.0 | 30/33(91%) | 0/33(0%) | Minus/Plus |
Query 12 T*RYLTKLLLIFVLSF*FKSRIVSFLFPIPPNT 110 T*RYLTKLLLIFVLSF*FKSRIVSFLFPI N+ Subject 8427 T*RYLTKLLLIFVLSF*FKSRIVSFLFPIHLNS 8525
Range 4: 8036 to 8521 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
346.6 bits(750) | 0.0 | 161/162(99%) | 0/162(0%) | Minus/Plus |
Query 16 NLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNXXXXXXXXXXXLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPSK 501 NLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNSLVLCTLLSVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDP K Subject 8036 NLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNSLVLCTLLSVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPLK 8521
Range 5: 8036 to 8521 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
308.5 bits(667) | 0.0 | 159/162(98%) | 0/162(0%) | Plus/Minus |
Query 16 FGGIGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQXXXXXXXXLPTKYEAXXXXXXXXXXXXSPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHCSHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQI 501 F IGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQNRRINI*RLPTKYEAIITTNYNITII*SPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRH SHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQI Subject 8036 FKWIGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQNRRINI*RLPTKYEAIITTNYNITII*SPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHRSHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQI 8521
Range 6: 8104 to 8325 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
175.2 bits(376) | 0.0 | 74/74(100%) | 0/74(0%) | Plus/Minus |
Query 212 NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA 433 NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA Subject 8104 NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA 8325
Range 7: 8362 to 8520 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
119.7 bits(255) | 0.0 | 52/53(98%) | 0/53(0%) | Plus/Minus |
Query 17 LEGSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR 175 L GSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR Subject 8362 LSGSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR 8520
Range 8: 8038 to 8064 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
24.4 bits(47) | 0.0 | 9/9(100%) | 0/9(0%) | Plus/Minus |
Query 473 V*YCRMSPK 499 V*YCRMSPK Subject 8038 V*YCRMSPK 8064
Range 9: 8037 to 8324 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.0 bits(489) | 0.0 | 95/96(99%) | 0/96(0%) | Minus/Plus |
Query 213 IWGTSGNTTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*EQ*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD 500 IWGTSGNTTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*E+*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD Subject 8037 IWGTSGNTTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*ER*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD 8324
Grapevine leafroll associated virus 3 isolate WA MR, complete genome
Sequence ID: GU983863.1 Length: 18498 Number of Matches: 10
Range 1: 8223 to 8630 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
307.6 bits(665) | 0.0 | 134/136(99%) | 0/136(0%) | Minus/Plus |
Query 92 FGGHPAILHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RRENNDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P 499 FGGHPA+LHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RREN+DEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P Subject 8223 FGGHPAVLHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RRENDDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P 8630
Range 2: 8612 to 8710 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
64.3 bits(134) | 0.0 | 30/33(91%) | 0/33(0%) | Minus/Plus |
Query 12 T*RYLTKLLLIFVLSF*FKSRIVSFLFPIPPNT 110 T*RYLTKLLLIFVLSF*FKSRIVSFLFPI N+ Subject 8612 T*RYLTKLLLIFVLSF*FKSRIVSFLFPIHLNS 8710
Range 3: 8222 to 8698 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
350.2 bits(758) | 0.0 | 157/159(99%) | 0/159(0%) | Plus/Minus |
Query 24 DREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSLFSRRYHTHHKRK*TKLLYQHQXXXXXXXXXXXXEHSEICRTY*YPVHRCSIAGCPPN 500 DREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSS FSRRYHTHHKRK*TKLLYQHQVSRVSTPPPVS*EHSEICRTY*YPVHRCS AGCPPN Subject 8222 DREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSSFSRRYHTHHKRK*TKLLYQHQVSRVSTPPPVS*EHSEICRTY*YPVHRCSTAGCPPN 8698
Range 4: 8221 to 8706 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
346.6 bits(750) | 0.0 | 161/162(99%) | 0/162(0%) | Minus/Plus |
Query 16 NLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNXXXXXXXXXXXLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPSK 501 NLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNSLVLCTLLSVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDP K Subject 8221 NLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNSLVLCTLLSVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPLK 8706
Range 5: 8221 to 8706 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
308.5 bits(667) | 0.0 | 159/162(98%) | 0/162(0%) | Plus/Minus |
Query 16 FGGIGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQXXXXXXXXLPTKYEAXXXXXXXXXXXXSPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHCSHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQI 501 F IGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQNRRINI*RLPTKYEAIITTNYNITII*SPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRH SHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQI Subject 8221 FKWIGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQNRRINI*RLPTKYEAIITTNYNITII*SPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHRSHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQI 8706
Range 6: 8289 to 8510 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
175.2 bits(376) | 0.0 | 74/74(100%) | 0/74(0%) | Plus/Minus |
Query 212 NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA 433 NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA Subject 8289 NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA 8510
Range 7: 8547 to 8705 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
119.7 bits(255) | 0.0 | 52/53(98%) | 0/53(0%) | Plus/Minus |
Query 17 LEGSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR 175 L GSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR Subject 8547 LSGSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR 8705
Range 8: 8223 to 8249 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
24.4 bits(47) | 0.0 | 9/9(100%) | 0/9(0%) | Plus/Minus |
Query 473 V*YCRMSPK 499 V*YCRMSPK Subject 8223 V*YCRMSPK 8249
Range 9: 8222 to 8509 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
224.7 bits(484) | 0.0 | 94/96(98%) | 0/96(0%) | Minus/Plus |
Query 213 IWGTSGNTTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*EQ*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD 500 IWGTSG+TTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*E+*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD Subject 8222 IWGTSGSTTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*ER*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD 8509
Nucleotide Sequence (454 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
347.5 | 1928.9 | 41% | 6.188e-94 | 89% | HG931884.1 | |
347.5 | 1928.9 | 41% | 6.188e-94 | 89% | HG931887.1 | |
345.6 | 1919.9 | 44% | 2.181e-93 | 89% | DQ780886.1 | |
345.6 | 1925.2 | 42% | 2.204e-93 | 89% | AJ748511.1 | |
345.6 | 1925.2 | 42% | 2.204e-93 | 89% | AJ748512.1 |
Alignments
Grapevine leafroll associated virus 3 partial HSP70 gene for Heat shock protein 70 homolog, isolate ALG63
Sequence ID: HG931884.1 Length: 517 Number of Matches: 8
Range 1: 69 to 503 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
347.5 bits(752) | 0.0 | 144/145(99%) | 0/145(0%) | Plus/Plus |
Query 17 GPSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYL 451 G SDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYL Subject 69 GRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYL 503
Range 2: 75 to 503 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
342.0 bits(740) | 0.0 | 143/143(100%) | 0/143(0%) | Minus/Minus |
Query 23 QIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHIT 451 QIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHIT Subject 75 QIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHIT 503
Range 3: 67 to 504 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
333.3 bits(721) | 0.0 | 144/146(99%) | 0/146(0%) | Minus/Minus |
Query 15 PDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSXXXXXXXPNI*NRYCRTRP*ISAAN*PHHLDP 452 PDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSKP*PHKPPNI*NRYCRTRP*ISAAN*PHH P Subject 67 PDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSKP*PHKPPNI*NRYCRTRP*ISAAN*PHHSCP 504
Range 4: 76 to 504 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
325.9 bits(705) | 0.0 | 143/143(100%) | 0/143(0%) | Plus/Plus |
Query 24 VMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTLXXXXXXXX*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIW 452 VMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTL*RIR*RTR*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIW Subject 76 VMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTL*RIR*RTR*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIW 504
Range 5: 185 to 505 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
252.2 bits(544) | 0.0 | 107/107(100%) | 0/107(0%) | Plus/Plus |
Query 133 *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISG 453 *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISG Subject 185 *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISG 505
Range 6: 68 to 124 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.0 bits(81) | 0.0 | 17/19(89%) | 0/19(0%) | Plus/Plus |
Query 16 GSK*CG*FAADI*GRVRQY 72 G +*CG*FAADI*GRVRQY Subject 68 GQE*CG*FAADI*GRVRQY 124
Range 7: 257 to 505 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
197.6 bits(425) | 0.0 | 82/83(99%) | 0/83(0%) | Minus/Minus |
Query 205 SRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI 453 +RYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI Subject 257 TRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI 505
Grapevine leafroll associated virus 3 partial HSP70 gene for Heat shock protein 70 homolog, isolate ALG112
Sequence ID: HG931887.1 Length: 517 Number of Matches: 8
Range 1: 69 to 503 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
347.5 bits(752) | 0.0 | 144/145(99%) | 0/145(0%) | Plus/Plus |
Query 17 GPSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYL 451 G SDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYL Subject 69 GRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYL 503
Range 2: 75 to 503 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
342.0 bits(740) | 0.0 | 143/143(100%) | 0/143(0%) | Minus/Minus |
Query 23 QIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHIT 451 QIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHIT Subject 75 QIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHIT 503
Range 3: 67 to 504 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
333.3 bits(721) | 0.0 | 144/146(99%) | 0/146(0%) | Minus/Minus |
Query 15 PDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSXXXXXXXPNI*NRYCRTRP*ISAAN*PHHLDP 452 PDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSKP*PHKPPNI*NRYCRTRP*ISAAN*PHH P Subject 67 PDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSKP*PHKPPNI*NRYCRTRP*ISAAN*PHHSCP 504
Range 4: 76 to 504 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
325.9 bits(705) | 0.0 | 143/143(100%) | 0/143(0%) | Plus/Plus |
Query 24 VMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTLXXXXXXXX*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIW 452 VMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTL*RIR*RTR*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIW Subject 76 VMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTL*RIR*RTR*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIW 504
Range 5: 185 to 505 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
252.2 bits(544) | 0.0 | 107/107(100%) | 0/107(0%) | Plus/Plus |
Query 133 *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISG 453 *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISG Subject 185 *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISG 505
Range 6: 68 to 124 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.0 bits(81) | 0.0 | 17/19(89%) | 0/19(0%) | Plus/Plus |
Query 16 GSK*CG*FAADI*GRVRQY 72 G +*CG*FAADI*GRVRQY Subject 68 GQE*CG*FAADI*GRVRQY 124
Range 7: 257 to 505 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
197.6 bits(425) | 0.0 | 82/83(99%) | 0/83(0%) | Minus/Minus |
Query 205 SRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI 453 +RYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI Subject 257 TRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI 505
Grapevine leafroll associated virus 3 isolate WA C2 1 heat shock protein 70 like protein (HSP 70) gene, partial cds
Sequence ID: DQ780886.1 Length: 544 Number of Matches: 9
Range 1: 103 to 531 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
345.6 bits(748) | 0.0 | 143/143(100%) | 0/143(0%) | Plus/Plus |
Query 23 SDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYL 451 SDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYL Subject 103 SDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYL 531
Range 2: 213 to 533 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
246.2 bits(531) | 0.0 | 105/107(98%) | 0/107(0%) | Plus/Plus |
Query 133 *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISG 453 *RTETGGHFNEYANG G GFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISG Subject 213 *RTETGGHFNEYANG*GGGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISG 533
Range 3: 104 to 238 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
117.5 bits(250) | 0.0 | 45/45(100%) | 0/45(0%) | Plus/Plus |
Query 24 VMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTL 158 VMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTL Subject 104 VMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTL 238
Range 4: 103 to 531 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
339.2 bits(734) | 0.0 | 141/143(99%) | 0/143(0%) | Minus/Minus |
Query 23 QIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHIT 451 QIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIH+L+R*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHIT Subject 103 QIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHHLIR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHIT 531
Range 5: 95 to 532 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
327.3 bits(708) | 0.0 | 142/146(97%) | 0/146(0%) | Minus/Minus |
Query 15 PDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSXXXXXXXPNI*NRYCRTRP*ISAAN*PHHLDP 452 PDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENP P PLAYSLKCPPVSVRYYLPKYRSKP*PHKPPNI*NRYCRTRP*ISAAN*PHH P Subject 95 PDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPPPHPLAYSLKCPPVSVRYYLPKYRSKP*PHKPPNI*NRYCRTRP*ISAAN*PHHS*P 532
Range 6: 285 to 533 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
197.6 bits(425) | 0.0 | 82/83(99%) | 0/83(0%) | Minus/Minus |
Query 205 SRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI 453 +RYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI Subject 285 TRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI 533
Range 7: 102 to 218 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
89.0 bits(188) | 0.0 | 39/39(100%) | 0/39(0%) | Minus/Minus |
Query 22 PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSL 138 PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSL Subject 102 PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSL 218
Range 8: 266 to 532 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
217.3 bits(468) | 0.0 | 89/89(100%) | 0/89(0%) | Plus/Plus |
Query 186 WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIW 452 WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIW Subject 266 WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIW 532
Grapevine leafroll associated virus 3 partial mRNA for heat shock protein 70 homologue (HSP 70 gene), isolate AUSG 5 4
Sequence ID: AJ748511.1 Length: 545 Number of Matches: 8
Range 1: 103 to 531 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
345.6 bits(748) | 0.0 | 143/143(100%) | 0/143(0%) | Plus/Plus |
Query 23 SDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYL 451 SDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYL Subject 103 SDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYL 531
Range 2: 103 to 531 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
342.0 bits(740) | 0.0 | 143/143(100%) | 0/143(0%) | Minus/Minus |
Query 23 QIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHIT 451 QIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHIT Subject 103 QIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHIT 531
Range 3: 95 to 532 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
332.8 bits(720) | 0.0 | 144/146(99%) | 0/146(0%) | Minus/Minus |
Query 15 PDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSXXXXXXXPNI*NRYCRTRP*ISAAN*PHHLDP 452 PDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSKP*PHKPPNI*NRYCRTRP*ISAAN*PHH P Subject 95 PDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSKP*PHKPPNI*NRYCRTRP*ISAAN*PHHS*P 532
Range 4: 104 to 532 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
325.9 bits(705) | 0.0 | 143/143(100%) | 0/143(0%) | Plus/Plus |
Query 24 VMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTLXXXXXXXX*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIW 452 VMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTL*RIR*RTR*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIW Subject 104 VMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTL*RIR*RTR*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIW 532
Range 5: 213 to 533 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
252.2 bits(544) | 0.0 | 107/107(100%) | 0/107(0%) | Plus/Plus |
Query 133 *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISG 453 *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISG Subject 213 *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISG 533
Range 6: 96 to 152 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.0 bits(81) | 0.0 | 17/19(89%) | 0/19(0%) | Plus/Plus |
Query 16 GSK*CG*FAADI*GRVRQY 72 G +*CG*FAADI*GRVRQY Subject 96 GQE*CG*FAADI*GRVRQY 152
Range 7: 285 to 533 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
197.6 bits(425) | 0.0 | 82/83(99%) | 0/83(0%) | Minus/Minus |
Query 205 SRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI 453 +RYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI Subject 285 TRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI 533
Grapevine leafroll associated virus 3 partial mRNA for heat shock protein 70 homologue (HSP 70 gene), isolate AUSG 5 5
Sequence ID: AJ748512.1 Length: 545 Number of Matches: 8
Range 1: 103 to 531 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
345.6 bits(748) | 0.0 | 143/143(100%) | 0/143(0%) | Plus/Plus |
Query 23 SDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYL 451 SDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYL Subject 103 SDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYL 531
Range 2: 103 to 531 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
342.0 bits(740) | 0.0 | 143/143(100%) | 0/143(0%) | Minus/Minus |
Query 23 QIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHIT 451 QIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHIT Subject 103 QIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHIT 531
Range 3: 95 to 532 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
332.8 bits(720) | 0.0 | 144/146(99%) | 0/146(0%) | Minus/Minus |
Query 15 PDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSXXXXXXXPNI*NRYCRTRP*ISAAN*PHHLDP 452 PDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSKP*PHKPPNI*NRYCRTRP*ISAAN*PHH P Subject 95 PDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSKP*PHKPPNI*NRYCRTRP*ISAAN*PHHS*P 532
Range 4: 104 to 532 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
325.9 bits(705) | 0.0 | 143/143(100%) | 0/143(0%) | Plus/Plus |
Query 24 VMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTLXXXXXXXX*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIW 452 VMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTL*RIR*RTR*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIW Subject 104 VMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTL*RIR*RTR*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIW 532
Range 5: 213 to 533 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
252.2 bits(544) | 0.0 | 107/107(100%) | 0/107(0%) | Plus/Plus |
Query 133 *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISG 453 *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISG Subject 213 *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISG 533
Range 6: 96 to 152 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.0 bits(81) | 0.0 | 17/19(89%) | 0/19(0%) | Plus/Plus |
Query 16 GSK*CG*FAADI*GRVRQY 72 G +*CG*FAADI*GRVRQY Subject 96 GQE*CG*FAADI*GRVRQY 152
Range 7: 285 to 533 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
197.6 bits(425) | 0.0 | 82/83(99%) | 0/83(0%) | Minus/Minus |
Query 205 SRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI 453 +RYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI Subject 285 TRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI 533
Nucleotide Sequence (445 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
345.2 | 1938.5 | 30% | 2.934e-93 | 96% | JX559645.1 | |
345.2 | 1923.9 | 30% | 2.934e-93 | 96% | NC_004667.1 | |
345.2 | 1923.9 | 30% | 2.934e-93 | 96% | AF037268.2 | |
345.2 | 1911.0 | 30% | 2.934e-93 | 91% | GQ352631.1 | |
345.2 | 1938.5 | 30% | 2.934e-93 | 96% | GU983863.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 8
Range 1: 13285 to 13719 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
345.2 bits(747) | 0.0 | 145/145(100%) | 0/145(0%) | Plus/Plus |
Query 9 EKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGRVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNE 443 EKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGRVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNE Subject 13285 EKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGRVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNE 13719
Range 2: 13281 to 13721 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
341.5 bits(739) | 0.0 | 145/147(99%) | 0/147(0%) | Plus/Plus |
Query 5 RGEVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*IL*RSHMSG*ATLRHSQEQLEDAELCRRYVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERK 445 R EVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*+L*RSHMSG*ATLRHSQEQLEDAELCRRYVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERK Subject 13281 RREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRRYVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERK 13721
Range 3: 13286 to 13720 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
339.7 bits(735) | 0.0 | 144/145(99%) | 0/145(0%) | Minus/Minus |
Query 10 FRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTYRLHNSASSNCSCECRNVA*PDM*DRYSIYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTS 444 FRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTYRLHNSASSNCSCECRNVA*PDM*DRYS YIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTS Subject 13286 FRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTYRLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTS 13720
Range 4: 13285 to 13719 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
334.6 bits(724) | 0.0 | 144/145(99%) | 0/145(0%) | Minus/Minus |
Query 9 FVRLDIVYNASVICGVDRISHLRSYTISRVIR*RTVYITQRLPIVPANAVMSPSQTCEIAIVST*YTLSVYPALF*YSKGTIFYPP*RNLLDSSLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLL 443 FVRLDIVYNASVICGVDRISHLRSYTISRVIR*RTVYITQRLPIVPANAVMSPSQTCEIAIV T*YTLSVYPALF*YSKGTIFYPP*RNLLDSSLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLL Subject 13285 FVRLDIVYNASVICGVDRISHLRSYTISRVIR*RTVYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLDSSLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLL 13719
Range 5: 13284 to 13721 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
313.6 bits(678) | 0.0 | 146/146(100%) | 0/146(0%) | Minus/Minus |
Query 8 FSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTLPFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFS 445 FSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTLPFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFS Subject 13284 FSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTLPFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFS 13721
Range 6: 13472 to 13633 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
118.4 bits(252) | 0.0 | 53/54(98%) | 0/54(0%) | Plus/Plus |
Query 196 KIVPLEYQKSAG*TLNVYYVDTIAISHVWLGDITAFAGTIGRR*VM*TVR*RMT 357 KIVPLEYQKSAG*TLNVYYV TIAISHVWLGDITAFAGTIGRR*VM*TVR*RMT Subject 13472 KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIGRR*VM*TVR*RMT 13633
Grapevine leafroll associated virus 3, complete genome
Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 8
Range 1: 12706 to 13140 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
345.2 bits(747) | 0.0 | 145/145(100%) | 0/145(0%) | Plus/Plus |
Query 9 EKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGRVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNE 443 EKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGRVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNE Subject 12706 EKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGRVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNE 13140
Range 2: 12702 to 13142 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
336.9 bits(729) | 0.0 | 144/147(98%) | 0/147(0%) | Plus/Plus |
Query 5 RGEVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*IL*RSHMSG*ATLRHSQEQLEDAELCRRYVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERK 445 R EVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*+L*RSHMSG*ATLRHSQEQLEDAELCRR VSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERK Subject 12702 RREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRRDVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERK 13142
Range 3: 12707 to 13141 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
335.6 bits(726) | 0.0 | 143/145(99%) | 0/145(0%) | Minus/Minus |
Query 10 FRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTYRLHNSASSNCSCECRNVA*PDM*DRYSIYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTS 444 FRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLT RLHNSASSNCSCECRNVA*PDM*DRYS YIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTS Subject 12707 FRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTSRLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTS 13141
Range 4: 12706 to 13140 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
331.9 bits(718) | 0.0 | 143/145(99%) | 0/145(0%) | Minus/Minus |
Query 9 FVRLDIVYNASVICGVDRISHLRSYTISRVIR*RTVYITQRLPIVPANAVMSPSQTCEIAIVST*YTLSVYPALF*YSKGTIFYPP*RNLLDSSLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLL 443 FVRLDIVYNASVICGVDRISHLRSYTISRVIR*R VYITQRLPIVPANAVMSPSQTCEIAIV T*YTLSVYPALF*YSKGTIFYPP*RNLLDSSLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLL Subject 12706 FVRLDIVYNASVICGVDRISHLRSYTISRVIR*RPVYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLDSSLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLL 13140
Range 5: 12705 to 13142 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
313.6 bits(678) | 0.0 | 146/146(100%) | 0/146(0%) | Minus/Minus |
Query 8 FSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTLPFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFS 445 FSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTLPFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFS Subject 12705 FSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTLPFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFS 13142
Range 6: 12893 to 13054 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
115.2 bits(245) | 0.0 | 52/54(96%) | 0/54(0%) | Plus/Plus |
Query 196 KIVPLEYQKSAG*TLNVYYVDTIAISHVWLGDITAFAGTIGRR*VM*TVR*RMT 357 KIVPLEYQKSAG*TLNVYYV TIAISHVWLGDITAFAGTIGRR*VM*T R*RMT Subject 12893 KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIGRR*VM*TGR*RMT 13054
Grapevine leafroll associated virus 3, complete genome
Sequence ID: AF037268.2 Length: 17919 Number of Matches: 8
Range 1: 12706 to 13140 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
345.2 bits(747) | 0.0 | 145/145(100%) | 0/145(0%) | Plus/Plus |
Query 9 EKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGRVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNE 443 EKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGRVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNE Subject 12706 EKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGRVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNE 13140
Range 2: 12702 to 13142 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
336.9 bits(729) | 0.0 | 144/147(98%) | 0/147(0%) | Plus/Plus |
Query 5 RGEVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*IL*RSHMSG*ATLRHSQEQLEDAELCRRYVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERK 445 R EVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*+L*RSHMSG*ATLRHSQEQLEDAELCRR VSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERK Subject 12702 RREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRRDVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERK 13142
Range 3: 12707 to 13141 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
335.6 bits(726) | 0.0 | 143/145(99%) | 0/145(0%) | Minus/Minus |
Query 10 FRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTYRLHNSASSNCSCECRNVA*PDM*DRYSIYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTS 444 FRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLT RLHNSASSNCSCECRNVA*PDM*DRYS YIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTS Subject 12707 FRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTSRLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTS 13141
Range 4: 12706 to 13140 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
331.9 bits(718) | 0.0 | 143/145(99%) | 0/145(0%) | Minus/Minus |
Query 9 FVRLDIVYNASVICGVDRISHLRSYTISRVIR*RTVYITQRLPIVPANAVMSPSQTCEIAIVST*YTLSVYPALF*YSKGTIFYPP*RNLLDSSLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLL 443 FVRLDIVYNASVICGVDRISHLRSYTISRVIR*R VYITQRLPIVPANAVMSPSQTCEIAIV T*YTLSVYPALF*YSKGTIFYPP*RNLLDSSLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLL Subject 12706 FVRLDIVYNASVICGVDRISHLRSYTISRVIR*RPVYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLDSSLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLL 13140
Range 5: 12705 to 13142 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
313.6 bits(678) | 0.0 | 146/146(100%) | 0/146(0%) | Minus/Minus |
Query 8 FSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTLPFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFS 445 FSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTLPFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFS Subject 12705 FSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTLPFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFS 13142
Range 6: 12893 to 13054 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
115.2 bits(245) | 0.0 | 52/54(96%) | 0/54(0%) | Plus/Plus |
Query 196 KIVPLEYQKSAG*TLNVYYVDTIAISHVWLGDITAFAGTIGRR*VM*TVR*RMT 357 KIVPLEYQKSAG*TLNVYYV TIAISHVWLGDITAFAGTIGRR*VM*T R*RMT Subject 12893 KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIGRR*VM*TGR*RMT 13054
Grapevine leafroll associated virus 3 isolate 621, complete genome
Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 8
Range 1: 13285 to 13719 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
345.2 bits(747) | 0.0 | 145/145(100%) | 0/145(0%) | Plus/Plus |
Query 9 EKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGRVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNE 443 EKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGRVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNE Subject 13285 EKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGRVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNE 13719
Range 2: 13286 to 13720 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
333.7 bits(722) | 0.0 | 142/145(98%) | 0/145(0%) | Minus/Minus |
Query 10 FRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTYRLHNSASSNCSCECRNVA*PDM*DRYSIYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTS 444 FRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTYRLHNSASSNCSCECRNVA*PDM*DRYS YIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW* CRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTS Subject 13286 FRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTYRLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*H*CRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTS 13720
Range 3: 13281 to 13721 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
333.7 bits(722) | 0.0 | 143/147(97%) | 0/147(0%) | Plus/Plus |
Query 5 RGEVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*IL*RSHMSG*ATLRHSQEQLEDAELCRRYVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERK 445 R EVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRH YQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*+L*RSHMSG*ATLRHSQEQLEDAELCRRYVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERK Subject 13281 RREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRH*CYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRRYVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERK 13721
Range 4: 13285 to 13719 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
329.6 bits(713) | 0.0 | 142/145(98%) | 0/145(0%) | Minus/Minus |
Query 9 FVRLDIVYNASVICGVDRISHLRSYTISRVIR*RTVYITQRLPIVPANAVMSPSQTCEIAIVST*YTLSVYPALF*YSKGTIFYPP*RNLLDSSLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLL 443 FVRLDIVYNASVICGVDRISHLRSYTISRVIR*RTVYITQRLPIVPANAVMSPSQTCEIAIV T*YTLSVYPALF*YSKGTIFYPP*RNLLDSSLYPHIEEIRASFNPGS+ AVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLL Subject 13285 FVRLDIVYNASVICGVDRISHLRSYTISRVIR*RTVYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLDSSLYPHIEEIRASFNPGSISAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLL 13719
Range 5: 13284 to 13721 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
310.8 bits(672) | 0.0 | 145/146(99%) | 0/146(0%) | Minus/Minus |
Query 8 FSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTLPFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFS 445 FSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTLPFILTLRKSGRLLILVA VP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFS Subject 13284 FSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTLPFILTLRKSGRLLILVALVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFS 13721
Range 6: 13472 to 13633 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
118.4 bits(252) | 0.0 | 53/54(98%) | 0/54(0%) | Plus/Plus |
Query 196 KIVPLEYQKSAG*TLNVYYVDTIAISHVWLGDITAFAGTIGRR*VM*TVR*RMT 357 KIVPLEYQKSAG*TLNVYYV TIAISHVWLGDITAFAGTIGRR*VM*TVR*RMT Subject 13472 KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIGRR*VM*TVR*RMT 13633
Grapevine leafroll associated virus 3 isolate WA MR, complete genome
Sequence ID: GU983863.1 Length: 18498 Number of Matches: 8
Range 1: 13285 to 13719 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
345.2 bits(747) | 0.0 | 145/145(100%) | 0/145(0%) | Plus/Plus |
Query 9 EKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGRVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNE 443 EKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGRVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNE Subject 13285 EKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGRVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNE 13719
Range 2: 13281 to 13721 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
341.5 bits(739) | 0.0 | 145/147(99%) | 0/147(0%) | Plus/Plus |
Query 5 RGEVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*IL*RSHMSG*ATLRHSQEQLEDAELCRRYVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERK 445 R EVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*+L*RSHMSG*ATLRHSQEQLEDAELCRRYVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERK Subject 13281 RREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRRYVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERK 13721
Range 3: 13286 to 13720 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
339.7 bits(735) | 0.0 | 144/145(99%) | 0/145(0%) | Minus/Minus |
Query 10 FRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTYRLHNSASSNCSCECRNVA*PDM*DRYSIYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTS 444 FRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTYRLHNSASSNCSCECRNVA*PDM*DRYS YIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTS Subject 13286 FRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTYRLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTS 13720
Range 4: 13285 to 13719 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
334.6 bits(724) | 0.0 | 144/145(99%) | 0/145(0%) | Minus/Minus |
Query 9 FVRLDIVYNASVICGVDRISHLRSYTISRVIR*RTVYITQRLPIVPANAVMSPSQTCEIAIVST*YTLSVYPALF*YSKGTIFYPP*RNLLDSSLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLL 443 FVRLDIVYNASVICGVDRISHLRSYTISRVIR*RTVYITQRLPIVPANAVMSPSQTCEIAIV T*YTLSVYPALF*YSKGTIFYPP*RNLLDSSLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLL Subject 13285 FVRLDIVYNASVICGVDRISHLRSYTISRVIR*RTVYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLDSSLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLL 13719
Range 5: 13284 to 13721 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
313.6 bits(678) | 0.0 | 146/146(100%) | 0/146(0%) | Minus/Minus |
Query 8 FSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTLPFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFS 445 FSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTLPFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFS Subject 13284 FSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTLPFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFS 13721
Range 6: 13472 to 13633 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
118.4 bits(252) | 0.0 | 53/54(98%) | 0/54(0%) | Plus/Plus |
Query 196 KIVPLEYQKSAG*TLNVYYVDTIAISHVWLGDITAFAGTIGRR*VM*TVR*RMT 357 KIVPLEYQKSAG*TLNVYYV TIAISHVWLGDITAFAGTIGRR*VM*TVR*RMT Subject 13472 KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIGRR*VM*TVR*RMT 13633
Nucleotide Sequence (763 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
605.0 | 3204.2 | 44% | 3.827e-171 | 98% | GU983863.1 | |
603.2 | 3193.7 | 44% | 1.363e-170 | 97% | KX756669.1 | |
600.9 | 3180.9 | 44% | 6.673e-170 | 96% | JX559645.1 | |
593.5 | 3180.1 | 44% | 1.069e-167 | 95% | NC_004667.1 | |
593.5 | 3180.1 | 44% | 1.069e-167 | 95% | AF037268.2 |
Alignments
Grapevine leafroll associated virus 3 isolate WA MR, complete genome
Sequence ID: GU983863.1 Length: 18498 Number of Matches: 12
Range 1: 3962 to 4723 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
605.0 bits(1314) | 0.0 | 253/254(100%) | 0/254(0%) | Plus/Plus |
Query 2 GVFGCGPNCMEV*ARNCG*R*KVRGQ*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGCDRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKGLA*RHHTSTCLRPTGRGEECV**DA*VLPGL*L*RRCWSIWDSA*SGSR*R*RWIHF*CLKL*WCHKCARRGD*HQRGSYW*RRDPFTS 763 GVFGCGPNCMEV*ARNCG*R*KVRGQ*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGCDRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKGLA*RHHTSTCLRPTGRGEECV**DA*VLPGL*L*RRCWSIWDSA*SGSR*R*RWIHF*CL L*WCHKCARRGD*HQRGSYW*RRDPFTS Subject 3962 GVFGCGPNCMEV*ARNCG*R*KVRGQ*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGCDRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKGLA*RHHTSTCLRPTGRGEECV**DA*VLPGL*L*RRCWSIWDSA*SGSR*R*RWIHF*CLNL*WCHKCARRGD*HQRGSYW*RRDPFTS 4723
Range 2: 3963 to 4721 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
563.3 bits(1223) | 0.0 | 252/253(100%) | 0/253(0%) | Minus/Minus |
Query 3 R*MGLFFTSNFPVGANPHVAHICDTIIV*DTRSGSIAIVTGNRFMLSPRWTSTFVIVKVPVIPKRLIIHIPPLYRWDVSKLRYGVVKQAPYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARXXXXXXXXGL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRR 761 R*MGLFFTSNFPVGANPHVAHICDTII *DTRSGSIAIVTGNRFMLSPRWTSTFVIVKVPVIPKRLIIHIPPLYRWDVSKLRYGVVKQAPYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARG*TA*TTGGL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRR Subject 3963 R*MGLFFTSNFPVGANPHVAHICDTIID*DTRSGSIAIVTGNRFMLSPRWTSTFVIVKVPVIPKRLIIHIPPLYRWDVSKLRYGVVKQAPYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARG*TA*TTGGL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRR 4721
Range 3: 4152 to 4721 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
391.5 bits(848) | 0.0 | 189/190(99%) | 0/190(0%) | Plus/Plus |
Query 192 AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMXXXXXXXXXXARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVPGXXXXXXXXXXXXXXGVTNVRDVGISTNGEVTGEEETHSP 761 AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMFFFGLGTLLGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVPGDDSDGSTSSVS YDGVTNVRDVGISTNGEVTGEEETHSP Subject 4152 AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMFFFGLGTLLGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVPGDDSDGSTSSVSIYDGVTNVRDVGISTNGEVTGEEETHSP 4721
Range 4: 3961 to 4146 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
145.9 bits(312) | 0.0 | 62/62(100%) | 0/62(0%) | Plus/Plus |
Query 1 WRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGF 186 WRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGF Subject 3961 WRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGF 4146
Range 5: 4105 to 4626 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
407.0 bits(882) | 0.0 | 174/174(100%) | 0/174(0%) | Minus/Minus |
Query 145 KWIHRYRHREPLHAESQMDQHLRHSQSPGNT*ASHHTHSSPLPVGRKQVEVWCR*ASPL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RSQPTKTLFARLKIHRILC 666 KWIHRYRHREPLHAESQMDQHLRHSQSPGNT*ASHHTHSSPLPVGRKQVEVWCR*ASPL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RSQPTKTLFARLKIHRILC Subject 4105 KWIHRYRHREPLHAESQMDQHLRHSQSPGNT*ASHHTHSSPLPVGRKQVEVWCR*ASPL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RSQPTKTLFARLKIHRILC 4626
Range 6: 3961 to 4062 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
86.8 bits(183) | 0.0 | 34/34(100%) | 0/34(0%) | Minus/Minus |
Query 1 TSLEFRNYCPRTF*R*PQFRAYTSMQLGPHPKTP 102 TSLEFRNYCPRTF*R*PQFRAYTSMQLGPHPKTP Subject 3961 TSLEFRNYCPRTF*R*PQFRAYTSMQLGPHPKTP 4062
Range 7: 4669 to 4722 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
46.4 bits(95) | 0.0 | 18/18(100%) | 0/18(0%) | Minus/Minus |
Query 709 EVNGSLLHQ*LPRWC*SP 762 EVNGSLLHQ*LPRWC*SP Subject 4669 EVNGSLLHQ*LPRWC*SP 4722
Range 8: 3962 to 4519 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
402.5 bits(872) | 0.0 | 186/186(100%) | 0/186(0%) | Minus/Minus |
Query 2 YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVSXXXXXXXXXXXAIPRLYFHAIGAAPKDA 559 YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVS*LLPAYLLALAAIPRLYFHAIGAAPKDA Subject 3962 YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVS*LLPAYLLALAAIPRLYFHAIGAAPKDA 4519
Range 9: 4562 to 4723 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
95.0 bits(201) | 0.0 | 53/54(98%) | 0/54(0%) | Minus/Minus |
Query 602 RGEWXXXXXXXXXXXLIPTSRTFVTPS*FETLEVDPSLSSPGTASC*VPDGPAP 763 RGEWVSSSPVTSPLVLIPTSRTFVTPS* ETLEVDPSLSSPGTASC*VPDGPAP Subject 4562 RGEWVSSSPVTSPLVLIPTSRTFVTPS*IETLEVDPSLSSPGTASC*VPDGPAP 4723
Range 10: 4183 to 4497 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
253.5 bits(547) | 0.0 | 105/105(100%) | 0/105(0%) | Plus/Plus |
Query 223 NVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*GACLTTPYLNLLTSH 537 NVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*GACLTTPYLNLLTSH Subject 4183 NVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*GACLTTPYLNLLTSH 4497
Range 11: 4537 to 4722 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
145.4 bits(311) | 0.0 | 61/62(98%) | 0/62(0%) | Plus/Plus |
Query 577 ITGTLTMTKVLVHLGLSMKRFPVTIAMDPLLVSQTMMVSQMCATWGLAPTGKLLVKKRPIHL 762 ITGTLTMTKVLVHLGLSMKRFPVTIAMDPLLVSQ+MMVSQMCATWGLAPTGKLLVKKRPIHL Subject 4537 ITGTLTMTKVLVHLGLSMKRFPVTIAMDPLLVSQSMMVSQMCATWGLAPTGKLLVKKRPIHL 4722
Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome
Sequence ID: KX756669.1 Length: 18313 Number of Matches: 12
Range 1: 3777 to 4538 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
603.2 bits(1310) | 0.0 | 252/254(99%) | 0/254(0%) | Plus/Plus |
Query 2 GVFGCGPNCMEV*ARNCG*R*KVRGQ*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGCDRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKGLA*RHHTSTCLRPTGRGEECV**DA*VLPGL*L*RRCWSIWDSA*SGSR*R*RWIHF*CLKL*WCHKCARRGD*HQRGSYW*RRDPFTS 763 GVFGCGPNCMEV*ARNCG*R*KVRG+*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGCDRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKGLA*RHHTSTCLRPTGRGEECV *DA*VLPGL*L*RRCWSIWDSA*SGSR*R*RWIHF*CLKL*WCHKCARRGD*HQRGSYW*RRDPFTS Subject 3777 GVFGCGPNCMEV*ARNCG*R*KVRGR*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGCDRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKGLA*RHHTSTCLRPTGRGEECVR*DA*VLPGL*L*RRCWSIWDSA*SGSR*R*RWIHF*CLKL*WCHKCARRGD*HQRGSYW*RRDPFTS 4538
Range 2: 3778 to 4536 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
564.2 bits(1225) | 0.0 | 251/253(99%) | 0/253(0%) | Minus/Minus |
Query 3 R*MGLFFTSNFPVGANPHVAHICDTIIV*DTRSGSIAIVTGNRFMLSPRWTSTFVIVKVPVIPKRLIIHIPPLYRWDVSKLRYGVVKQAPYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARXXXXXXXXGL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRR 761 R*MGLFFTSNFPVGANPHVAHICDTII *DTRSGSIAIVTGNRFMLSPRWTSTFVIVKVPVIPKRLI+HIPPLYRWDVSKLRYGVVKQAPYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARG*TA*TTGGL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRR Subject 3778 R*MGLFFTSNFPVGANPHVAHICDTIIA*DTRSGSIAIVTGNRFMLSPRWTSTFVIVKVPVIPKRLIVHIPPLYRWDVSKLRYGVVKQAPYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARG*TA*TTGGL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRR 4536
Range 3: 3967 to 4536 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
391.5 bits(848) | 0.0 | 189/190(99%) | 0/190(0%) | Plus/Plus |
Query 192 AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMXXXXXXXXXXARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVPGXXXXXXXXXXXXXXGVTNVRDVGISTNGEVTGEEETHSP 761 AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMFFFGLGTLLGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVPGDDSDGSTSSVS+YDGVTNVRDVGISTNGEVTGEEETHSP Subject 3967 AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMFFFGLGTLLGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVPGDDSDGSTSSVSSYDGVTNVRDVGISTNGEVTGEEETHSP 4536
Range 4: 3776 to 3961 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
145.9 bits(312) | 0.0 | 62/62(100%) | 0/62(0%) | Plus/Plus |
Query 1 WRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGF 186 WRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGF Subject 3776 WRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGF 3961
Range 5: 3920 to 4441 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
403.4 bits(874) | 0.0 | 173/174(99%) | 0/174(0%) | Minus/Minus |
Query 145 KWIHRYRHREPLHAESQMDQHLRHSQSPGNT*ASHHTHSSPLPVGRKQVEVWCR*ASPL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RSQPTKTLFARLKIHRILC 666 KWIHRYRHREPLHAESQMDQHLRHSQSPGNT*ASH THSSPLPVGRKQVEVWCR*ASPL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RSQPTKTLFARLKIHRILC Subject 3920 KWIHRYRHREPLHAESQMDQHLRHSQSPGNT*ASHRTHSSPLPVGRKQVEVWCR*ASPL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RSQPTKTLFARLKIHRILC 4441
Range 6: 3776 to 3877 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
81.3 bits(171) | 0.0 | 33/34(97%) | 0/34(0%) | Minus/Minus |
Query 1 TSLEFRNYCPRTF*R*PQFRAYTSMQLGPHPKTP 102 TSLEFRNY PRTF*R*PQFRAYTSMQLGPHPKTP Subject 3776 TSLEFRNYRPRTF*R*PQFRAYTSMQLGPHPKTP 3877
Range 7: 4484 to 4537 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
46.4 bits(95) | 0.0 | 18/18(100%) | 0/18(0%) | Minus/Minus |
Query 709 EVNGSLLHQ*LPRWC*SP 762 EVNGSLLHQ*LPRWC*SP Subject 4484 EVNGSLLHQ*LPRWC*SP 4537
Range 8: 3777 to 4334 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
402.5 bits(872) | 0.0 | 185/186(99%) | 0/186(0%) | Minus/Minus |
Query 2 YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVSXXXXXXXXXXXAIPRLYFHAIGAAPKDA 559 YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVS*L PAYLLALAAIPRLYFHAIGAAPKDA Subject 3777 YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVS*LPPAYLLALAAIPRLYFHAIGAAPKDA 4334
Range 9: 4377 to 4538 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
95.0 bits(201) | 0.0 | 53/54(98%) | 0/54(0%) | Minus/Minus |
Query 602 RGEWXXXXXXXXXXXLIPTSRTFVTPS*FETLEVDPSLSSPGTASC*VPDGPAP 763 RGEWVSSSPVTSPLVLIPTSRTFVTPS* ETLEVDPSLSSPGTASC*VPDGPAP Subject 4377 RGEWVSSSPVTSPLVLIPTSRTFVTPS*LETLEVDPSLSSPGTASC*VPDGPAP 4538
Range 10: 3998 to 4312 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
253.5 bits(547) | 0.0 | 105/105(100%) | 0/105(0%) | Plus/Plus |
Query 223 NVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*GACLTTPYLNLLTSH 537 NVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*GACLTTPYLNLLTSH Subject 3998 NVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*GACLTTPYLNLLTSH 4312
Range 11: 4352 to 4537 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.9 bits(310) | 0.0 | 61/62(98%) | 0/62(0%) | Plus/Plus |
Query 577 ITGTLTMTKVLVHLGLSMKRFPVTIAMDPLLVSQTMMVSQMCATWGLAPTGKLLVKKRPIHL 762 ITGTLTMTKVLVHLGLSMKRFPVTIAMDPLLVSQ MMVSQMCATWGLAPTGKLLVKKRPIHL Subject 4352 ITGTLTMTKVLVHLGLSMKRFPVTIAMDPLLVSQAMMVSQMCATWGLAPTGKLLVKKRPIHL 4537
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 12
Range 1: 3962 to 4723 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
600.9 bits(1305) | 0.0 | 251/254(99%) | 0/254(0%) | Plus/Plus |
Query 2 GVFGCGPNCMEV*ARNCG*R*KVRGQ*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGCDRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKGLA*RHHTSTCLRPTGRGEECV**DA*VLPGL*L*RRCWSIWDSA*SGSR*R*RWIHF*CLKL*WCHKCARRGD*HQRGSYW*RRDPFTS 763 GVFGCGPNCMEV*ARNCG*R*KVRG+*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGCDRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKGLA*RHHTSTCLRPTGRGEECV *DA*VLPGL*L*RRCWSIWDSA*SGSR R*RWIHF*CLKL*WCHKCARRGD*HQRGSYW*RRDPFTS Subject 3962 GVFGCGPNCMEV*ARNCG*R*KVRGR*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGCDRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKGLA*RHHTSTCLRPTGRGEECVR*DA*VLPGL*L*RRCWSIWDSA*SGSRLR*RWIHF*CLKL*WCHKCARRGD*HQRGSYW*RRDPFTS 4723
Range 2: 3963 to 4721 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
562.4 bits(1221) | 0.0 | 250/253(99%) | 0/253(0%) | Minus/Minus |
Query 3 R*MGLFFTSNFPVGANPHVAHICDTIIV*DTRSGSIAIVTGNRFMLSPRWTSTFVIVKVPVIPKRLIIHIPPLYRWDVSKLRYGVVKQAPYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARXXXXXXXXGL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRR 761 R*MGLFFTSNFPVGANPHVAHICDTII *DTRSGSI IVTGNRFMLSPRWTSTFVIVKVPVIPKRLI+HIPPLYRWDVSKLRYGVVKQAPYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARG*TA*TTGGL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRR Subject 3963 R*MGLFFTSNFPVGANPHVAHICDTIIA*DTRSGSIVIVTGNRFMLSPRWTSTFVIVKVPVIPKRLIVHIPPLYRWDVSKLRYGVVKQAPYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARG*TA*TTGGL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRR 4721
Range 3: 4152 to 4721 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
391.5 bits(848) | 0.0 | 187/190(98%) | 0/190(0%) | Plus/Plus |
Query 192 AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMXXXXXXXXXXARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVPGXXXXXXXXXXXXXXGVTNVRDVGISTNGEVTGEEETHSP 761 AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMFFFGLGTLLGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVPG D+DGSTSSVS+YDGVTNVRDVGISTNGEVTGEEETHSP Subject 4152 AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMFFFGLGTLLGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVPGYDNDGSTSSVSSYDGVTNVRDVGISTNGEVTGEEETHSP 4721
Range 4: 3961 to 4146 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
145.9 bits(312) | 0.0 | 62/62(100%) | 0/62(0%) | Plus/Plus |
Query 1 WRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGF 186 WRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGF Subject 3961 WRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGF 4146
Range 5: 4105 to 4626 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
400.2 bits(867) | 0.0 | 172/174(99%) | 0/174(0%) | Minus/Minus |
Query 145 KWIHRYRHREPLHAESQMDQHLRHSQSPGNT*ASHHTHSSPLPVGRKQVEVWCR*ASPL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RSQPTKTLFARLKIHRILC 666 KWIHRYR+REPLHAESQMDQHLRHSQSPGNT*ASH THSSPLPVGRKQVEVWCR*ASPL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RSQPTKTLFARLKIHRILC Subject 4105 KWIHRYRNREPLHAESQMDQHLRHSQSPGNT*ASHRTHSSPLPVGRKQVEVWCR*ASPL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RSQPTKTLFARLKIHRILC 4626
Range 6: 3961 to 4062 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
81.3 bits(171) | 0.0 | 33/34(97%) | 0/34(0%) | Minus/Minus |
Query 1 TSLEFRNYCPRTF*R*PQFRAYTSMQLGPHPKTP 102 TSLEFRNY PRTF*R*PQFRAYTSMQLGPHPKTP Subject 3961 TSLEFRNYRPRTF*R*PQFRAYTSMQLGPHPKTP 4062
Range 7: 4669 to 4722 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
46.4 bits(95) | 0.0 | 18/18(100%) | 0/18(0%) | Minus/Minus |
Query 709 EVNGSLLHQ*LPRWC*SP 762 EVNGSLLHQ*LPRWC*SP Subject 4669 EVNGSLLHQ*LPRWC*SP 4722
Range 8: 3962 to 4519 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
402.5 bits(872) | 0.0 | 185/186(99%) | 0/186(0%) | Minus/Minus |
Query 2 YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVSXXXXXXXXXXXAIPRLYFHAIGAAPKDA 559 YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVS*L PAYLLALAAIPRLYFHAIGAAPKDA Subject 3962 YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVS*LPPAYLLALAAIPRLYFHAIGAAPKDA 4519
Range 9: 4562 to 4723 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
91.3 bits(193) | 0.0 | 52/54(96%) | 0/54(0%) | Minus/Minus |
Query 602 RGEWXXXXXXXXXXXLIPTSRTFVTPS*FETLEVDPSLSSPGTASC*VPDGPAP 763 RGEWVSSSPVTSPLVLIPTSRTFVTPS* ETLEVDPSLS PGTASC*VPDGPAP Subject 4562 RGEWVSSSPVTSPLVLIPTSRTFVTPS*LETLEVDPSLS*PGTASC*VPDGPAP 4723
Range 10: 4183 to 4497 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
253.5 bits(547) | 0.0 | 105/105(100%) | 0/105(0%) | Plus/Plus |
Query 223 NVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*GACLTTPYLNLLTSH 537 NVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*GACLTTPYLNLLTSH Subject 4183 NVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*GACLTTPYLNLLTSH 4497
Range 11: 4537 to 4722 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
143.1 bits(306) | 0.0 | 60/62(97%) | 0/62(0%) | Plus/Plus |
Query 577 ITGTLTMTKVLVHLGLSMKRFPVTIAMDPLLVSQTMMVSQMCATWGLAPTGKLLVKKRPIHL 762 ITGTLTMTKVLVHLGLSMKRFPVTI MDPLLVSQ MMVSQMCATWGLAPTGKLLVKKRPIHL Subject 4537 ITGTLTMTKVLVHLGLSMKRFPVTITMDPLLVSQAMMVSQMCATWGLAPTGKLLVKKRPIHL 4722
Grapevine leafroll associated virus 3, complete genome
Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 13
Range 1: 3383 to 4144 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
593.5 bits(1289) | 0.0 | 251/254(99%) | 0/254(0%) | Plus/Plus |
Query 2 GVFGCGPNCMEV*ARNCG*R*KVRGQ*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGCDRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKGLA*RHHTSTCLRPTGRGEECV**DA*VLPGL*L*RRCWSIWDSA*SGSR*R*RWIHF*CLKL*WCHKCARRGD*HQRGSYW*RRDPFTS 763 GVFGCGPNCMEV*ARNCG*R*KVRGQ*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVG DRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKGLA*RHHTSTCLRPTGRGEECV *DA*VLPGL*L*RRCWSIWDSA*SGSR*R*RWIHF*CLKL* CHKCARRGD*HQRGSYW*RRDPFTS Subject 3383 GVFGCGPNCMEV*ARNCG*R*KVRGQ*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGGDRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKGLA*RHHTSTCLRPTGRGEECVR*DA*VLPGL*L*RRCWSIWDSA*SGSR*R*RWIHF*CLKL*CCHKCARRGD*HQRGSYW*RRDPFTS 4144
Range 2: 3384 to 4142 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
557.8 bits(1211) | 0.0 | 248/253(98%) | 0/253(0%) | Minus/Minus |
Query 3 R*MGLFFTSNFPVGANPHVAHICDTIIV*DTRSGSIAIVTGNRFMLSPRWTSTFVIVKVPVIPKRLIIHIPPLYRWDVSKLRYGVVKQAPYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARXXXXXXXXGL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRR 761 R*MGLFFTSNFPVGANPHVAHICD II *DTRSGSI IVTGNRFMLSPRWTSTFVIVKVPVIPKRLI+HIPPLYRWDVSKLRYGVVKQAPYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGH RRKPSSHD*RSTGYCARG*TA*TTGGL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRR Subject 3384 R*MGLFFTSNFPVGANPHVAHICDNIIA*DTRSGSIVIVTGNRFMLSPRWTSTFVIVKVPVIPKRLIVHIPPLYRWDVSKLRYGVVKQAPYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGHRRRKPSSHD*RSTGYCARG*TA*TTGGL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRR 4142
Range 3: 3573 to 4025 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
338.3 bits(732) | 0.0 | 151/151(100%) | 0/151(0%) | Plus/Plus |
Query 192 AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMXXXXXXXXXXARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVPG 644 AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMFFFGLGTLLGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVPG Subject 3573 AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMFFFGLGTLLGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVPG 4025
Range 4: 3382 to 3567 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
145.9 bits(312) | 0.0 | 62/62(100%) | 0/62(0%) | Plus/Plus |
Query 1 WRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGF 186 WRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGF Subject 3382 WRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGF 3567
Range 5: 4071 to 4142 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
59.7 bits(124) | 0.0 | 24/24(100%) | 0/24(0%) | Plus/Plus |
Query 690 VTNVRDVGISTNGEVTGEEETHSP 761 VTNVRDVGISTNGEVTGEEETHSP Subject 4071 VTNVRDVGISTNGEVTGEEETHSP 4142
Range 6: 3526 to 4047 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
400.6 bits(868) | 0.0 | 172/174(99%) | 0/174(0%) | Minus/Minus |
Query 145 KWIHRYRHREPLHAESQMDQHLRHSQSPGNT*ASHHTHSSPLPVGRKQVEVWCR*ASPL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RSQPTKTLFARLKIHRILC 666 KWIHRYRHREPLHAESQMDQHLRHSQSPGNT*ASH THSSPLPVGRKQVEVWCR*ASPL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RS PTKTLFARLKIHRILC Subject 3526 KWIHRYRHREPLHAESQMDQHLRHSQSPGNT*ASHRTHSSPLPVGRKQVEVWCR*ASPL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RSPPTKTLFARLKIHRILC 4047
Range 7: 3382 to 3483 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
86.8 bits(183) | 0.0 | 34/34(100%) | 0/34(0%) | Minus/Minus |
Query 1 TSLEFRNYCPRTF*R*PQFRAYTSMQLGPHPKTP 102 TSLEFRNYCPRTF*R*PQFRAYTSMQLGPHPKTP Subject 3382 TSLEFRNYCPRTF*R*PQFRAYTSMQLGPHPKTP 3483
Range 8: 4090 to 4143 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
46.4 bits(95) | 0.0 | 18/18(100%) | 0/18(0%) | Minus/Minus |
Query 709 EVNGSLLHQ*LPRWC*SP 762 EVNGSLLHQ*LPRWC*SP Subject 4090 EVNGSLLHQ*LPRWC*SP 4143
Range 9: 3383 to 3940 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
402.5 bits(872) | 0.0 | 186/186(100%) | 0/186(0%) | Minus/Minus |
Query 2 YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVSXXXXXXXXXXXAIPRLYFHAIGAAPKDA 559 YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVS*LLPAYLLALAAIPRLYFHAIGAAPKDA Subject 3383 YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVS*LLPAYLLALAAIPRLYFHAIGAAPKDA 3940
Range 10: 3983 to 4144 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
91.3 bits(193) | 0.0 | 52/54(96%) | 0/54(0%) | Minus/Minus |
Query 602 RGEWXXXXXXXXXXXLIPTSRTFVTPS*FETLEVDPSLSSPGTASC*VPDGPAP 763 RGEWVSSSPVTSPLVLIPTSRTFVT S* ETLEVDPSLSSPGTASC*VPDGPAP Subject 3983 RGEWVSSSPVTSPLVLIPTSRTFVTTS*LETLEVDPSLSSPGTASC*VPDGPAP 4144
Range 11: 3604 to 3918 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
253.5 bits(547) | 0.0 | 105/105(100%) | 0/105(0%) | Plus/Plus |
Query 223 NVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*GACLTTPYLNLLTSH 537 NVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*GACLTTPYLNLLTSH Subject 3604 NVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*GACLTTPYLNLLTSH 3918
Range 12: 3958 to 4143 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
141.7 bits(303) | 0.0 | 59/62(95%) | 0/62(0%) | Plus/Plus |
Query 577 ITGTLTMTKVLVHLGLSMKRFPVTIAMDPLLVSQTMMVSQMCATWGLAPTGKLLVKKRPIHL 762 ITGTLTMTKVLVHLGLSMKRFPVTI MDPLLVSQ MM+SQMCATWGLAPTGKLLVKKRPIHL Subject 3958 ITGTLTMTKVLVHLGLSMKRFPVTITMDPLLVSQAMMLSQMCATWGLAPTGKLLVKKRPIHL 4143
Grapevine leafroll associated virus 3, complete genome
Sequence ID: AF037268.2 Length: 17919 Number of Matches: 13
Range 1: 3383 to 4144 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
593.5 bits(1289) | 0.0 | 251/254(99%) | 0/254(0%) | Plus/Plus |
Query 2 GVFGCGPNCMEV*ARNCG*R*KVRGQ*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGCDRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKGLA*RHHTSTCLRPTGRGEECV**DA*VLPGL*L*RRCWSIWDSA*SGSR*R*RWIHF*CLKL*WCHKCARRGD*HQRGSYW*RRDPFTS 763 GVFGCGPNCMEV*ARNCG*R*KVRGQ*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVG DRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKGLA*RHHTSTCLRPTGRGEECV *DA*VLPGL*L*RRCWSIWDSA*SGSR*R*RWIHF*CLKL* CHKCARRGD*HQRGSYW*RRDPFTS Subject 3383 GVFGCGPNCMEV*ARNCG*R*KVRGQ*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGGDRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKGLA*RHHTSTCLRPTGRGEECVR*DA*VLPGL*L*RRCWSIWDSA*SGSR*R*RWIHF*CLKL*CCHKCARRGD*HQRGSYW*RRDPFTS 4144
Range 2: 3384 to 4142 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
557.8 bits(1211) | 0.0 | 248/253(98%) | 0/253(0%) | Minus/Minus |
Query 3 R*MGLFFTSNFPVGANPHVAHICDTIIV*DTRSGSIAIVTGNRFMLSPRWTSTFVIVKVPVIPKRLIIHIPPLYRWDVSKLRYGVVKQAPYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARXXXXXXXXGL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRR 761 R*MGLFFTSNFPVGANPHVAHICD II *DTRSGSI IVTGNRFMLSPRWTSTFVIVKVPVIPKRLI+HIPPLYRWDVSKLRYGVVKQAPYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGH RRKPSSHD*RSTGYCARG*TA*TTGGL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRR Subject 3384 R*MGLFFTSNFPVGANPHVAHICDNIIA*DTRSGSIVIVTGNRFMLSPRWTSTFVIVKVPVIPKRLIVHIPPLYRWDVSKLRYGVVKQAPYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGHRRRKPSSHD*RSTGYCARG*TA*TTGGL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRR 4142
Range 3: 3573 to 4025 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
338.3 bits(732) | 0.0 | 151/151(100%) | 0/151(0%) | Plus/Plus |
Query 192 AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMXXXXXXXXXXARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVPG 644 AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMFFFGLGTLLGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVPG Subject 3573 AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMFFFGLGTLLGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVPG 4025
Range 4: 3382 to 3567 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
145.9 bits(312) | 0.0 | 62/62(100%) | 0/62(0%) | Plus/Plus |
Query 1 WRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGF 186 WRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGF Subject 3382 WRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGF 3567
Range 5: 4071 to 4142 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
59.7 bits(124) | 0.0 | 24/24(100%) | 0/24(0%) | Plus/Plus |
Query 690 VTNVRDVGISTNGEVTGEEETHSP 761 VTNVRDVGISTNGEVTGEEETHSP Subject 4071 VTNVRDVGISTNGEVTGEEETHSP 4142
Range 6: 3526 to 4047 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
400.6 bits(868) | 0.0 | 172/174(99%) | 0/174(0%) | Minus/Minus |
Query 145 KWIHRYRHREPLHAESQMDQHLRHSQSPGNT*ASHHTHSSPLPVGRKQVEVWCR*ASPL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RSQPTKTLFARLKIHRILC 666 KWIHRYRHREPLHAESQMDQHLRHSQSPGNT*ASH THSSPLPVGRKQVEVWCR*ASPL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RS PTKTLFARLKIHRILC Subject 3526 KWIHRYRHREPLHAESQMDQHLRHSQSPGNT*ASHRTHSSPLPVGRKQVEVWCR*ASPL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RSPPTKTLFARLKIHRILC 4047
Range 7: 3382 to 3483 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
86.8 bits(183) | 0.0 | 34/34(100%) | 0/34(0%) | Minus/Minus |
Query 1 TSLEFRNYCPRTF*R*PQFRAYTSMQLGPHPKTP 102 TSLEFRNYCPRTF*R*PQFRAYTSMQLGPHPKTP Subject 3382 TSLEFRNYCPRTF*R*PQFRAYTSMQLGPHPKTP 3483
Range 8: 4090 to 4143 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
46.4 bits(95) | 0.0 | 18/18(100%) | 0/18(0%) | Minus/Minus |
Query 709 EVNGSLLHQ*LPRWC*SP 762 EVNGSLLHQ*LPRWC*SP Subject 4090 EVNGSLLHQ*LPRWC*SP 4143
Range 9: 3383 to 3940 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
402.5 bits(872) | 0.0 | 186/186(100%) | 0/186(0%) | Minus/Minus |
Query 2 YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVSXXXXXXXXXXXAIPRLYFHAIGAAPKDA 559 YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVS*LLPAYLLALAAIPRLYFHAIGAAPKDA Subject 3383 YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVS*LLPAYLLALAAIPRLYFHAIGAAPKDA 3940
Range 10: 3983 to 4144 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
91.3 bits(193) | 0.0 | 52/54(96%) | 0/54(0%) | Minus/Minus |
Query 602 RGEWXXXXXXXXXXXLIPTSRTFVTPS*FETLEVDPSLSSPGTASC*VPDGPAP 763 RGEWVSSSPVTSPLVLIPTSRTFVT S* ETLEVDPSLSSPGTASC*VPDGPAP Subject 3983 RGEWVSSSPVTSPLVLIPTSRTFVTTS*LETLEVDPSLSSPGTASC*VPDGPAP 4144
Range 11: 3604 to 3918 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
253.5 bits(547) | 0.0 | 105/105(100%) | 0/105(0%) | Plus/Plus |
Query 223 NVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*GACLTTPYLNLLTSH 537 NVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*GACLTTPYLNLLTSH Subject 3604 NVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*GACLTTPYLNLLTSH 3918
Range 12: 3958 to 4143 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
141.7 bits(303) | 0.0 | 59/62(95%) | 0/62(0%) | Plus/Plus |
Query 577 ITGTLTMTKVLVHLGLSMKRFPVTIAMDPLLVSQTMMVSQMCATWGLAPTGKLLVKKRPIHL 762 ITGTLTMTKVLVHLGLSMKRFPVTI MDPLLVSQ MM+SQMCATWGLAPTGKLLVKKRPIHL Subject 3958 ITGTLTMTKVLVHLGLSMKRFPVTITMDPLLVSQAMMLSQMCATWGLAPTGKLLVKKRPIHL 4143
Nucleotide Sequence (358 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
287.4 | 1550.1 | 28% | 4.925e-76 | 99% | DQ680141.1 | |
287.4 | 1550.1 | 28% | 4.925e-76 | 99% | DQ680142.1 | |
287.4 | 1550.1 | 28% | 4.925e-76 | 99% | GQ865602.1 | |
287.4 | 1597.9 | 14% | 4.925e-76 | 42% | HQ130299.1 | |
287.4 | 1597.9 | 14% | 4.925e-76 | 42% | HQ130303.1 |
Alignments
Grapevine leafroll associated virus 3 isolate Pet 1 coat protein gene, complete cds
Sequence ID: DQ680141.1 Length: 942 Number of Matches: 9
Range 1: 454 to 804 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
287.4 bits(621) | 0.0 | 116/117(99%) | 0/117(0%) | Plus/Minus |
Query 2 AVYRVRKEFRWYPMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLH 352 AVYRVRKEFRWY MLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLH Subject 454 AVYRVRKEFRWYSMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLH 804
Range 2: 453 to 803 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
277.4 bits(599) | 0.0 | 116/117(99%) | 0/117(0%) | Minus/Plus |
Query 3 DGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWGTTEILSVHDRL 353 DGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAW TTEILSVHDRL Subject 453 DGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWSTTEILSVHDRL 803
Range 3: 451 to 804 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
263.2 bits(568) | 0.0 | 117/118(99%) | 0/118(0%) | Minus/Plus |
Query 2 VMELCKKVMGADDAATKTKFFLYVMQIACXXXXXXXXXFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDC 355 +MELCKKVMGADDAATKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDC Subject 451 LMELCKKVMGADDAATKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDC 804
Range 4: 597 to 803 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
170.6 bits(366) | 0.0 | 69/69(100%) | 0/69(0%) | Plus/Minus |
Query 3 QSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP 209 QSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP Subject 597 QSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP 803
Range 5: 453 to 557 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
82.6 bits(174) | 0.0 | 35/35(100%) | 0/35(0%) | Plus/Minus |
Query 249 EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSI 353 EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSI Subject 453 EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSI 557
Range 6: 530 to 805 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
210.9 bits(454) | 0.0 | 91/92(99%) | 0/92(0%) | Plus/Minus |
Query 1 RSLSCTERISVVPHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ 276 RSLSCTERISVV HAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ Subject 530 RSLSCTERISVVLHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ 805
Range 7: 452 to 478 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
24.0 bits(46) | 0.0 | 9/9(100%) | 0/9(0%) | Plus/Minus |
Query 328 P*PSYTAPS 354 P*PSYTAPS Subject 452 P*PSYTAPS 478
Range 8: 578 to 805 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
168.3 bits(361) | 0.0 | 75/76(99%) | 0/76(0%) | Minus/Plus |
Query 1 TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMGYHRNSFRTR*TA 228 TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSM YHRNSFRTR*TA Subject 578 TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMEYHRNSFRTR*TA 805
Grapevine leafroll associated virus 3 isolate Pet 2 coat protein gene, complete cds
Sequence ID: DQ680142.1 Length: 942 Number of Matches: 9
Range 1: 454 to 804 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
287.4 bits(621) | 0.0 | 116/117(99%) | 0/117(0%) | Plus/Minus |
Query 2 AVYRVRKEFRWYPMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLH 352 AVYRVRKEFRWY MLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLH Subject 454 AVYRVRKEFRWYSMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLH 804
Range 2: 453 to 803 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
277.4 bits(599) | 0.0 | 116/117(99%) | 0/117(0%) | Minus/Plus |
Query 3 DGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWGTTEILSVHDRL 353 DGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAW TTEILSVHDRL Subject 453 DGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWSTTEILSVHDRL 803
Range 3: 451 to 804 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
263.2 bits(568) | 0.0 | 117/118(99%) | 0/118(0%) | Minus/Plus |
Query 2 VMELCKKVMGADDAATKTKFFLYVMQIACXXXXXXXXXFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDC 355 +MELCKKVMGADDAATKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDC Subject 451 LMELCKKVMGADDAATKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDC 804
Range 4: 597 to 803 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
170.6 bits(366) | 0.0 | 69/69(100%) | 0/69(0%) | Plus/Minus |
Query 3 QSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP 209 QSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP Subject 597 QSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP 803
Range 5: 453 to 557 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
82.6 bits(174) | 0.0 | 35/35(100%) | 0/35(0%) | Plus/Minus |
Query 249 EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSI 353 EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSI Subject 453 EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSI 557
Range 6: 530 to 805 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
210.9 bits(454) | 0.0 | 91/92(99%) | 0/92(0%) | Plus/Minus |
Query 1 RSLSCTERISVVPHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ 276 RSLSCTERISVV HAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ Subject 530 RSLSCTERISVVLHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ 805
Range 7: 452 to 478 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
24.0 bits(46) | 0.0 | 9/9(100%) | 0/9(0%) | Plus/Minus |
Query 328 P*PSYTAPS 354 P*PSYTAPS Subject 452 P*PSYTAPS 478
Range 8: 578 to 805 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
168.3 bits(361) | 0.0 | 75/76(99%) | 0/76(0%) | Minus/Plus |
Query 1 TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMGYHRNSFRTR*TA 228 TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSM YHRNSFRTR*TA Subject 578 TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMEYHRNSFRTR*TA 805
Grapevine leafroll associated virus isolate KHCP2 coat protein gene, complete cds
Sequence ID: GQ865602.1 Length: 1428 Number of Matches: 9
Range 1: 577 to 927 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
287.4 bits(621) | 0.0 | 116/117(99%) | 0/117(0%) | Plus/Minus |
Query 2 AVYRVRKEFRWYPMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLH 352 AVYRVRKEFRWY MLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLH Subject 577 AVYRVRKEFRWYSMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLH 927
Range 2: 576 to 926 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
277.4 bits(599) | 0.0 | 116/117(99%) | 0/117(0%) | Minus/Plus |
Query 3 DGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWGTTEILSVHDRL 353 DGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAW TTEILSVHDRL Subject 576 DGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWSTTEILSVHDRL 926
Range 3: 574 to 927 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
263.2 bits(568) | 0.0 | 117/118(99%) | 0/118(0%) | Minus/Plus |
Query 2 VMELCKKVMGADDAATKTKFFLYVMQIACXXXXXXXXXFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDC 355 +MELCKKVMGADDAATKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDC Subject 574 LMELCKKVMGADDAATKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDC 927
Range 4: 720 to 926 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
170.6 bits(366) | 0.0 | 69/69(100%) | 0/69(0%) | Plus/Minus |
Query 3 QSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP 209 QSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP Subject 720 QSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP 926
Range 5: 576 to 680 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
82.6 bits(174) | 0.0 | 35/35(100%) | 0/35(0%) | Plus/Minus |
Query 249 EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSI 353 EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSI Subject 576 EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSI 680
Range 6: 653 to 928 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
210.9 bits(454) | 0.0 | 91/92(99%) | 0/92(0%) | Plus/Minus |
Query 1 RSLSCTERISVVPHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ 276 RSLSCTERISVV HAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ Subject 653 RSLSCTERISVVLHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ 928
Range 7: 575 to 601 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
24.0 bits(46) | 0.0 | 9/9(100%) | 0/9(0%) | Plus/Minus |
Query 328 P*PSYTAPS 354 P*PSYTAPS Subject 575 P*PSYTAPS 601
Range 8: 701 to 928 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
168.3 bits(361) | 0.0 | 75/76(99%) | 0/76(0%) | Minus/Plus |
Query 1 TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMGYHRNSFRTR*TA 228 TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSM YHRNSFRTR*TA Subject 701 TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMEYHRNSFRTR*TA 928
Grapevine leafroll associated virus 3 isolate 6 15 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130299.1 Length: 4711 Number of Matches: 10
Range 1: 570 to 920 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
287.4 bits(621) | 0.0 | 116/117(99%) | 0/117(0%) | Plus/Minus |
Query 2 AVYRVRKEFRWYPMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLH 352 AVYRVRKEFRWY MLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLH Subject 570 AVYRVRKEFRWYSMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLH 920
Range 2: 569 to 919 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
277.4 bits(599) | 0.0 | 116/117(99%) | 0/117(0%) | Minus/Plus |
Query 3 DGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWGTTEILSVHDRL 353 DGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAW TTEILSVHDRL Subject 569 DGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWSTTEILSVHDRL 919
Range 3: 567 to 920 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
263.2 bits(568) | 0.0 | 117/118(99%) | 0/118(0%) | Minus/Plus |
Query 2 VMELCKKVMGADDAATKTKFFLYVMQIACXXXXXXXXXFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDC 355 +MELCKKVMGADDAATKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDC Subject 567 LMELCKKVMGADDAATKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDC 920
Range 4: 713 to 919 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
170.6 bits(366) | 0.0 | 69/69(100%) | 0/69(0%) | Plus/Minus |
Query 3 QSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP 209 QSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP Subject 713 QSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP 919
Range 5: 569 to 673 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
82.6 bits(174) | 0.0 | 35/35(100%) | 0/35(0%) | Plus/Minus |
Query 249 EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSI 353 EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSI Subject 569 EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSI 673
Range 6: 646 to 921 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
210.9 bits(454) | 0.0 | 91/92(99%) | 0/92(0%) | Plus/Minus |
Query 1 RSLSCTERISVVPHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ 276 RSLSCTERISVV HAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ Subject 646 RSLSCTERISVVLHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ 921
Range 7: 568 to 594 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
24.0 bits(46) | 0.0 | 9/9(100%) | 0/9(0%) | Plus/Minus |
Query 328 P*PSYTAPS 354 P*PSYTAPS Subject 568 P*PSYTAPS 594
Range 8: 694 to 921 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
168.3 bits(361) | 0.0 | 75/76(99%) | 0/76(0%) | Minus/Plus |
Query 1 TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMGYHRNSFRTR*TA 228 TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSM YHRNSFRTR*TA Subject 694 TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMEYHRNSFRTR*TA 921
Grapevine leafroll associated virus 3 isolate 6 114 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130303.1 Length: 4711 Number of Matches: 10
Range 1: 570 to 920 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
287.4 bits(621) | 0.0 | 116/117(99%) | 0/117(0%) | Plus/Minus |
Query 2 AVYRVRKEFRWYPMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLH 352 AVYRVRKEFRWY MLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLH Subject 570 AVYRVRKEFRWYSMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLH 920
Range 2: 569 to 919 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
277.4 bits(599) | 0.0 | 116/117(99%) | 0/117(0%) | Minus/Plus |
Query 3 DGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWGTTEILSVHDRL 353 DGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAW TTEILSVHDRL Subject 569 DGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWSTTEILSVHDRL 919
Range 3: 567 to 920 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
263.2 bits(568) | 0.0 | 117/118(99%) | 0/118(0%) | Minus/Plus |
Query 2 VMELCKKVMGADDAATKTKFFLYVMQIACXXXXXXXXXFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDC 355 +MELCKKVMGADDAATKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDC Subject 567 LMELCKKVMGADDAATKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDC 920
Range 4: 713 to 919 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
170.6 bits(366) | 0.0 | 69/69(100%) | 0/69(0%) | Plus/Minus |
Query 3 QSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP 209 QSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP Subject 713 QSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP 919
Range 5: 569 to 673 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
82.6 bits(174) | 0.0 | 35/35(100%) | 0/35(0%) | Plus/Minus |
Query 249 EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSI 353 EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSI Subject 569 EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSI 673
Range 6: 646 to 921 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
210.9 bits(454) | 0.0 | 91/92(99%) | 0/92(0%) | Plus/Minus |
Query 1 RSLSCTERISVVPHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ 276 RSLSCTERISVV HAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ Subject 646 RSLSCTERISVVLHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ 921
Range 7: 568 to 594 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
24.0 bits(46) | 0.0 | 9/9(100%) | 0/9(0%) | Plus/Minus |
Query 328 P*PSYTAPS 354 P*PSYTAPS Subject 568 P*PSYTAPS 594
Range 8: 694 to 921 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
168.3 bits(361) | 0.0 | 75/76(99%) | 0/76(0%) | Minus/Plus |
Query 1 TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMGYHRNSFRTR*TA 228 TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSM YHRNSFRTR*TA Subject 694 TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMEYHRNSFRTR*TA 921