This html page seems to have been stripped by Galaxy.
Disable Galaxy's html sanitization feature to view the full page (see sanitize_all_html in your galaxy's universe_wsgi.ini), or download this page instead of viewing it in Galaxy.

Queries

Nucleotide Sequence (603 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 33 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
61
122
183
244
305
366
427
488
549
603

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate SK704 A, complete genome

Sequence ID: KX274274.1 Length: 8725 Number of Matches: 7

Range 1: 6355 to 6954 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
462.0 bits(1002) 0.0 195/200(98%) 0/200(0%) Minus/Plus
Query        3  MGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWRDVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNISVPREAHFIKTKTCRC*HQTC  602
                MGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWR VSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNISVPREAHFIKTKTCR    TC
Subject   6355  MGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWRGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNISVPREAHFIKTKTCRFGANTC  6954

Range 2: 6355 to 6954 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
457.9 bits(993) 0.0 185/200(92%) 0/200(0%) Plus/Minus
Query        3  AGLVLTPASFGLYEVCLPWNADVLVRV*EQHIKTMNV*DRQVLIKYIYLPLHCTPWRVGLDVPSC*IWTVWYTGCKSHERLVFRNELPY*ATFTATWNTMNNNWKFKHAEHTNKFEC*QSLD*VIHNTHITPNT*GLNNNLKQTRN*APHFVLIPNQETHAVIMRFNFLLSHHAYR*FSKSIGIRHLNCIIINAIFQIAH  602
                AG+   PASFGLYEVCLPWNADVLVRV*EQHIKTMN+ DRQVLIKY+YLPLHCTPWRVGLDVPSC*IWTVW+T CKSHERLVFRNELPY*AT TATWNTMNNNWKFKHAEHTNKF+C*QSLD*VIHNTH TPNT*GLNN+LKQTRN*APHFVLIPNQETHAVIMRFNFLLSHHAY *FSK IGIRHLNCIIINAIFQIAH
Subject   6355  AGVSTKPASFGLYEVCLPWNADVLVRV*EQHIKTMNIRDRQVLIKYVYLPLHCTPWRVGLDVPSC*IWTVWHTCCKSHERLVFRNELPY*ATLTATWNTMNNNWKFKHAEHTNKFKC*QSLD*VIHNTHTTPNT*GLNNDLKQTRN*APHFVLIPNQETHAVIMRFNFLLSHHAYG*FSKPIGIRHLNCIIINAIFQIAH  6954

Range 3: 6356 to 6955 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
441.9 bits(958) 0.0 187/200(94%) 0/200(0%) Plus/Minus
Query        2  CRFGANTCKFWSL*SVPPLER*CSGKGLRTAHQNHECLRQTSTHQVYLSSLALHTLESRA*CTFLLDLDCLVHRL*KPRKTRLQK*APLLGYFYRYLEHYEQQLEI*ARRTHQQIRMLTKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSFCAYSEPGNARSYNALQLPPQSSRL*IILQVYRHKTPQLHNYQCNFPNCP  601
                CR    TCKFWSL*SVPPLER*CSGKGLRTAHQNHE  RQTSTHQV LSSLALHTLESRA*CTFLLDLDCL H L*KPRKTRLQK*APLLGY YRYLEHYEQQLEI*ARRTHQQI+MLTKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSFCAYSEPGNARSYNALQLPPQSSRL IILQ YRHKTPQLHNYQCNFPNCP
Subject   6356  CRC*HQTCKFWSL*SVPPLER*CSGKGLRTAHQNHEYQRQTSTHQVCLSSLALHTLESRA*CTFLLDLDCLAHLL*KPRKTRLQK*APLLGYSYRYLEHYEQQLEI*ARRTHQQIQMLTKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSFCAYSEPGNARSYNALQLPPQSSRLWIILQAYRHKTPQLHNYQCNFPNCP  6955

Range 4: 6356 to 6955 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
409.3 bits(887) 0.0 185/200(92%) 0/200(0%) Minus/Plus
Query        2  WAIWKIALIIMQLRCLMPIDLENYL*A**LRRKLKRIITACVSWFGISTK*GAQFLVCLRLLFRP*VFGVM*VL*IT*SRLCQHSNLLVCSACLNFQLLFIVFQVAVKVA**GSSFLKTSLSWLLQPVYQTVQI*QEGTSSPTLQGVQCKGR*IYLMSTCLSQTFMVLMCCSQTLTRTSAFQGRHTS*RPKLAGVSTKPA  601
                WAIWKIALIIMQLRCLMPI LENY *A**LRRKLKRIITACVSWFGISTK*GAQFLVCLR LFRP*VFGV+*VL*IT*SRLCQH NLLVCSACLNFQLLFIVFQVAV+VA**GSSFLKTSLSWLLQ V QTVQI*QEGTSSPTLQGVQCKGR* YLMSTCLS  FMVLMCCSQTLTRTSAFQGRHTS*RPKLAG+   PA
Subject   6356  WAIWKIALIIMQLRCLMPIGLENYP*A**LRRKLKRIITACVSWFGISTK*GAQFLVCLRSLFRP*VFGVV*VL*IT*SRLCQHLNLLVCSACLNFQLLFIVFQVAVRVA**GSSFLKTSLSWLLQQVCQTVQI*QEGTSSPTLQGVQCKGR*TYLMSTCLSLIFMVLMCCSQTLTRTSAFQGRHTS*RPKLAGLVLTPA  6955

Range 5: 6354 to 6956 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
403.8 bits(875) 0.0 187/201(93%) 0/201(0%) Minus/Plus
Query        1  NGQFGKLH**LCN*GVLCL*TWRIIYRRDD*GGS*SAL*LRAFPGSE*AQNEVLNFWFV*GYCLGLKCLA*CEYYE*LSQGFVSIRICWCVLRA*IXXXXXXXSR*R*K*PNKGAHF*RRVFRGFYSRCTRQSKSNRKVHQALLSRVCSAREDKYT**VLVCLRHSWF*CAVLRPLPEHQRSKGGTLHKDQNLQVLAPNLQ  603
                NGQFGKLH**LCN*GVLCL* WRII+RRDD*GGS*SAL*LRAFPGSE*AQNEVLNFWFV*G+CLGLKCLA CEYYE*LSQGFVSI ICWCVLRA*ISSCCS*CSR*R*+*PNKGAHF*RRVFRGFYSRC RQSKSNRKVHQALLSRVCSAREDK+T**VLVCL +SWF*CAVLRPLPEHQRSKGGTLHKDQNLQV   +LQ
Subject   6354  NGQFGKLH**LCN*GVLCL*AWRIIHRRDD*GGS*SAL*LRAFPGSE*AQNEVLNFWFV*GHCLGLKCLAWCEYYE*LSQGFVSI*ICWCVLRA*ISSCCS*CSR*R*E*PNKGAHF*RRVFRGFYSRCARQSKSNRKVHQALLSRVCSAREDKHT**VLVCL*YSWF*CAVLRPLPEHQRSKGGTLHKDQNLQVWC*HLQ  6956

Range 6: 6684 to 6956 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
195.8 bits(421) 0.0 85/91(93%) 0/91(0%) Plus/Minus
Query        1  LQVWC*HLQVLVFMKCASLGTLMFW*GSENSTSKP*MSETDKYSSSIFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR  273
                LQV   +LQVLVFMKCASLGTLMFW*GSENSTSKP*+SETDKYSSS+FIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR
Subject   6684  LQVLAPNLQVLVFMKCASLGTLMFW*GSENSTSKP*ISETDKYSSSMFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR  6956

Range 7: 6354 to 6614 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
183.4 bits(394) 0.0 84/87(97%) 0/87(0%) Plus/Minus
Query      343  NSNADKALTKLFIILTSRQTLKA*TITSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPI  603
                NSNADKALTKLFIILT RQTLKA*T+TSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITP+DNSPSL*A*DTSIA*LSMQFSKLPI
Subject   6354  NSNADKALTKLFIILTPRQTLKA*TMTSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITPMDNSPSL*A*DTSIA*LSMQFSKLPI  6614

Grapevine rupestris stem pitting associated virus isolate VF1, partial genome

Sequence ID: KT948710.1 Length: 8716 Number of Matches: 7

Range 1: 6356 to 6955 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
456.1 bits(989) 0.0 193/200(96%) 0/200(0%) Minus/Plus
Query        3  MGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWRDVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNISVPREAHFIKTKTCRC*HQTC  602
                MGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWR VSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGC VQGKINILDEYLSVSDI GFDVLFSDPYQNISVPREAHFIKTKTCR    TC
Subject   6356  MGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWRGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCVVQGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKTKTCRFGANTC  6955

Range 2: 6356 to 6955 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
425.8 bits(923) 0.0 171/200(86%) 0/200(0%) Plus/Minus
Query        3  AGLVLTPASFGLYEVCLPWNADVLVRV*EQHIKTMNV*DRQVLIKYIYLPLHCTPWRVGLDVPSC*IWTVWYTGCKSHERLVFRNELPY*ATFTATWNTMNNNWKFKHAEHTNKFEC*QSLD*VIHNTHITPNT*GLNNNLKQTRN*APHFVLIPNQETHAVIMRFNFLLSHHAYR*FSKSIGIRHLNCIIINAIFQIAH  602
                AG+   PASFGLYEVCLPWNADVLV V*EQHIKT N+ DRQVLIKYIYLPLH TPWRVGLDVPSC IWTVWYT CKSH+RLV RN+LPY* TFTATWNTMNNNWKFKH EHTNKF+C QSLD*VIHNTH TPNT*GLNNNLKQTRN*APHF+LI NQETH VIMR NFLLSHH YR FSKS+ IRHLNCI+INAI QIAH
Subject   6356  AGVSTKPASFGLYEVCLPWNADVLVGV*EQHIKTRNIRDRQVLIKYIYLPLHYTPWRVGLDVPSCKIWTVWYTRCKSHKRLVLRNKLPY*TTFTATWNTMNNNWKFKHTEHTNKFKCRQSLD*VIHNTHTTPNT*GLNNNLKQTRN*APHFMLISNQETHTVIMRLNFLLSHHTYRQFSKSVSIRHLNCIVINAILQIAH  6955

Range 3: 6357 to 6956 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
398.3 bits(863) 0.0 171/200(86%) 0/200(0%) Plus/Minus
Query        2  CRFGANTCKFWSL*SVPPLER*CSGKGLRTAHQNHECLRQTSTHQVYLSSLALHTLESRA*CTFLLDLDCLVHRL*KPRKTRLQK*APLLGYFYRYLEHYEQQLEI*ARRTHQQIRMLTKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSFCAYSEPGNARSYNALQLPPQSSRL*IILQVYRHKTPQLHNYQCNFPNCP  601
                CR    TCKFWSL*SVPPLER*CSG+GLRTAHQN +  RQT THQVYLSSLALHTLESRA*CTFL DLDCLVH L*KP+KTR QK*APLL YFYRYLEHYEQQLEI*A RTHQQI+M TKP*LSYS*YSHHAKHLRPKQ*PQT+QKLSTSF AY EPGNA SYNA QLPPQSS L* ILQV +HKTPQLH+YQCN PNCP
Subject   6357  CRC*HQTCKFWSL*SVPPLER*CSGRGLRTAHQNQKYQRQTGTHQVYLSSLALHTLESRA*CTFL*DLDCLVHPL*KPQKTRPQK*APLLDYFYRYLEHYEQQLEI*AHRTHQQIQMQTKP*LSYS*YSHHAKHLRPKQ*PQTDQKLSTSFYAYFEPGNAHSYNAPQLPPQSSHL*TILQVCKHKTPQLHSYQCNSPNCP  6956

Range 4: 6357 to 6956 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
375.0 bits(812) 0.0 171/200(86%) 0/200(0%) Minus/Plus
Query        2  WAIWKIALIIMQLRCLMPIDLENYL*A**LRRKLKRIITACVSWFGISTK*GAQFLVCLRLLFRP*VFGVM*VL*IT*SRLCQHSNLLVCSACLNFQLLFIVFQVAVKVA**GSSFLKTSLSWLLQPVYQTVQI*QEGTSSPTLQGVQCKGR*IYLMSTCLSQTFMVLMCCSQTLTRTSAFQGRHTS*RPKLAGVSTKPA  601
                WAIW+IALI MQLRCLM  DLEN L* **LRRKL+RIIT CVSWF IS K*GAQFLVCLRLLFRP*VFGV+*VL*IT*SRLC H NLLVCS CLNFQLLFIVFQVAVKV **GS FL+TSL WLLQ VYQTVQI QEGTSSPTLQGV CKGR*IYLMSTCLS  F+VLMCCSQT TRTSAFQGRHTS*RPKLAG+   PA
Subject   6357  WAIWRIALITMQLRCLMLTDLENCL*V**LRRKLRRIITVCVSWFEISIK*GAQFLVCLRLLFRP*VFGVV*VL*IT*SRLCLHLNLLVCSVCLNFQLLFIVFQVAVKVV**GSLFLRTSLLWLLQRVYQTVQILQEGTSSPTLQGV*CKGR*IYLMSTCLSLIFLVLMCCSQTPTRTSAFQGRHTS*RPKLAGLVLTPA  6956

Range 5: 6355 to 6957 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
361.7 bits(783) 0.0 174/201(87%) 0/201(0%) Minus/Plus
Query        1  NGQFGKLH**LCN*GVLCL*TWRIIYRRDD*GGS*SAL*LRAFPGSE*AQNEVLNFWFV*GYCLGLKCLA*CEYYE*LSQGFVSIRICWCVLRA*IXXXXXXXSR*R*K*PNKGAHF*RRVFRGFYSRCTRQSKSNRKVHQALLSRVCSAREDKYT**VLVCLRHSWF*CAVLRPLPEHQRSKGGTLHKDQNLQVLAPNLQ  603
                NGQFG+LH**LCN*GVLCL TWRI+YR DD*GGS* AL*L AFPGS+*A NEVLNFW V*GYCLGLKCLA CEYYE*LSQGFV I ICWCVL A*ISSCCS*CSR*R*K* NKGA+F* RVF GFYS CTRQSKS RKVHQALLSRVCSAREDKYT**V VCL + WF*CAVLRPLPEHQRSKGGTLHKDQNLQV   +LQ
Subject   6355  NGQFGELH**LCN*GVLCLQTWRIVYRCDD*GGS*GAL*LCAFPGSK*A*NEVLNFWSV*GYCLGLKCLAWCEYYE*LSQGFVCI*ICWCVLCA*ISSCCS*CSR*R*K*SNKGAYF*GRVFCGFYSGCTRQSKSYRKVHQALLSRVCSAREDKYT**VPVCL*YFWF*CAVLRPLPEHQRSKGGTLHKDQNLQVWC*HLQ  6957

Range 6: 6685 to 6957 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
189.8 bits(408) 0.0 82/91(90%) 0/91(0%) Plus/Minus
Query        1  LQVWC*HLQVLVFMKCASLGTLMFW*GSENSTSKP*MSETDKYSSSIFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR  273
                LQV   +LQVLVFMKCASLGTLMFW*GSENSTSKP +SETD+YSSSIFIFPCT HPGE*GLMYLPVRFGLSGTPAVKATKDSSSE+SSLIR
Subject   6685  LQVLAPNLQVLVFMKCASLGTLMFW*GSENSTSKPEISETDRYSSSIFIFPCTTHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEISSLIR  6957

Range 7: 6355 to 6615 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
184.8 bits(397) 0.0 85/87(98%) 0/87(0%) Plus/Minus
Query      343  NSNADKALTKLFIILTSRQTLKA*TITSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPI  603
                NSNADKALTKLFIILT RQTLKA*TITSN+PEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPI
Subject   6355  NSNADKALTKLFIILTPRQTLKA*TITSNRPEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPI  6615

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: Hai1

Sequence ID: AB277787.1 Length: 2876 Number of Matches: 7

Range 1: 611 to 1210 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
454.7 bits(986) 0.0 191/200(96%) 0/200(0%) Minus/Plus
Query        3  MGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWRDVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNISVPREAHFIKTKTCRC*HQTC  602
                MGNLENCIDNYAIEVSYAYRLGELSIGVMTEEE+EAHYNCVRFLVRNKHKMRCSIS LFEVIV*ALSVWR VSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDI GFDVLFSDPYQNIS+PREAHFIKTKTCR   +TC
Subject    611  MGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEIEAHYNCVRFLVRNKHKMRCSISSLFEVIV*ALSVWRGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDISGFDVLFSDPYQNISIPREAHFIKTKTCRFGAKTC  1210

Range 2: 611 to 1210 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
418.0 bits(906) 0.0 168/200(84%) 0/200(0%) Plus/Minus
Query        3  AGLVLTPASFGLYEVCLPWNADVLVRV*EQHIKTMNV*DRQVLIKYIYLPLHCTPWRVGLDVPSC*IWTVWYTGCKSHERLVFRNELPY*ATFTATWNTMNNNWKFKHAEHTNKFEC*QSLD*VIHNTHITPNT*GLNNNLKQTRN*APHFVLIPNQETHAVIMRFNFLLSHHAYR*FSKSIGIRHLNCIIINAIFQIAH  602
                AG    PASFGLYEVCLPWNADVLV V*EQHIKT N+ DRQVLIKYIYLPLHCTPWRVGLDVPSC*IWTVW+T CKSH+R V RN+LPY*ATFT TWNTMNNNWKFK+ EH NKF+C QSLD*VIHNTH TPNT*GLN N KQTRN* PHF+LI NQETH VIMRFNFLLSHH  R FSKS+ IRHLNCIIINAIFQIAH
Subject    611  AGFSTKPASFGLYEVCLPWNADVLVGV*EQHIKTRNIRDRQVLIKYIYLPLHCTPWRVGLDVPSC*IWTVWHTRCKSHKRFVLRNKLPY*ATFTTTWNTMNNNWKFKYTEHANKFKCRQSLD*VIHNTHTTPNT*GLNYNFKQTRN*TPHFMLISNQETHTVIMRFNFLLSHHTNRQFSKSVSIRHLNCIIINAIFQIAH  1210

Range 3: 612 to 1211 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
388.3 bits(841) 0.0 167/200(84%) 0/200(0%) Plus/Minus
Query        2  CRFGANTCKFWSL*SVPPLER*CSGKGLRTAHQNHECLRQTSTHQVYLSSLALHTLESRA*CTFLLDLDCLVHRL*KPRKTRLQK*APLLGYFYRYLEHYEQQLEI*ARRTHQQIRMLTKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSFCAYSEPGNARSYNALQLPPQSSRL*IILQVYRHKTPQLHNYQCNFPNCP  601
                CRF   TCKFWSL*SVPPLE *CSG+GLRTAHQN +  RQTSTHQVYLSSLALHTLESRA*CTFLLDLDCL H L*KP+K R QK*APLLGYFY YLEHYEQQLEI*  RT QQI+M TKP*LSYS*YSHHAKHLRPK * QTN KL+TSF AY EPGNA SYNALQ PPQSS  * ILQV +HKTPQLHNYQCNFPNCP
Subject    612  CRF*HQTCKFWSL*SVPPLEC*CSGRGLRTAHQNQKYQRQTSTHQVYLSSLALHTLESRA*CTFLLDLDCLAHPL*KPQKIRPQK*APLLGYFYHYLEHYEQQLEI*VHRTRQQIQMQTKP*LSYS*YSHHAKHLRPKL*LQTN*KLNTSFYAYFEPGNAHSYNALQFPPQSSHQ*TILQVCKHKTPQLHNYQCNFPNCP  1211

Range 4: 612 to 1211 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
367.6 bits(796) 0.0 169/200(84%) 0/200(0%) Minus/Plus
Query        2  WAIWKIALIIMQLRCLMPIDLENYL*A**LRRKLKRIITACVSWFGISTK*GAQFLVCLRLLFRP*VFGVM*VL*IT*SRLCQHSNLLVCSACLNFQLLFIVFQVAVKVA**GSSFLKTSLSWLLQPVYQTVQI*QEGTSSPTLQGVQCKGR*IYLMSTCLSQTFMVLMCCSQTLTRTSAFQGRHTS*RPKLAGVSTKPA  601
                WAIWKIALIIMQLRCLM  DLEN L  **LRRKLKRIIT CVSWF IS K*G QFLVCL+L FRP*VFGV+*VL*IT*SRLC H NLL CS  LNFQLLFIVFQV VKVA**GS FL+T+L WLLQ V QTVQI*QEGTSSPTLQGVQCKGR*IYLMSTCLS  F+VLMCCSQT TRTSAFQGRHTS*RPKLAG+  KPA
Subject    612  WAIWKIALIIMQLRCLMLTDLENCLLV**LRRKLKRIITVCVSWFEISIK*GVQFLVCLKL*FRP*VFGVV*VL*IT*SRLCLHLNLLACSVYLNFQLLFIVFQVVVKVA**GSLFLRTNLLWLLQRVCQTVQI*QEGTSSPTLQGVQCKGR*IYLMSTCLSLIFLVLMCCSQTPTRTSAFQGRHTS*RPKLAGLVLKPA  1211

Range 5: 940 to 1212 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
190.3 bits(409) 0.0 83/91(91%) 0/91(0%) Plus/Minus
Query        1  LQVWC*HLQVLVFMKCASLGTLMFW*GSENSTSKP*MSETDKYSSSIFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR  273
                LQV   +LQVLVFMKCASLG LMFW*GSENSTSKP +SETDKYSSSIFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSE+SSLIR
Subject    940  LQVLAPNLQVLVFMKCASLGMLMFW*GSENSTSKPEISETDKYSSSIFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEISSLIR  1212

Range 6: 610 to 870 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
178.9 bits(384) 0.0 84/87(97%) 0/87(0%) Plus/Minus
Query      343  NSNADKALTKLFIILTSRQTLKA*TITSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPI  603
                NSNADKALTKLFIILT RQTLKA*TITSNK EIEHLILCLFRTRKRTQL*CAS SSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPI
Subject    610  NSNADKALTKLFIILTPRQTLKA*TITSNKLEIEHLILCLFRTRKRTQL*CASISSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPI  870

Range 7: 610 to 1212 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
344.7 bits(746) 0.0 169/201(84%) 0/201(0%) Minus/Plus
Query        1  NGQFGKLH**LCN*GVLCL*TWRIIYRRDD*GGS*SAL*LRAFPGSE*AQNEVLNFWFV*GYCLGLKCLA*CEYYE*LSQGFVSIRICWCVLRA*IXXXXXXXSR*R*K*PNKGAHF*RRVFRGFYSRCTRQSKSNRKVHQALLSRVCSAREDKYT**VLVCLRHSWF*CAVLRPLPEHQRSKGGTLHKDQNLQVLAPNLQ  603
                NGQFGKLH**LCN*GVLCL TWRI+Y  DD*GG+*SAL*L AFPGS+*A NEV NF FV* Y LGLKCLA CEYYE*LSQGFV I ICW VL  *ISSCCS*CSR* *K*PNKGA+F* R+F GFYS C RQSKSNRKVHQALLSRVCSAREDKYT**VLVCL + WF*CAVLRPLPEHQ SKGGTLHKDQNLQV   NLQ
Subject    610  NGQFGKLH**LCN*GVLCLQTWRIVYWCDD*GGN*SAL*LCAFPGSK*A*NEVFNF*FV*SYSLGLKCLAWCEYYE*LSQGFVCI*ICWRVLCT*ISSCCS*CSR*W*K*PNKGAYF*GRIFCGFYSGCARQSKSNRKVHQALLSRVCSAREDKYT**VLVCL*YFWF*CAVLRPLPEHQHSKGGTLHKDQNLQVWC*NLQ  1212

Grapevine rupestris stem pitting associated virus isolate CS BR, complete genome

Sequence ID: KX958435.1 Length: 8743 Number of Matches: 7

Range 1: 6356 to 6955 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
454.7 bits(986) 0.0 191/200(96%) 0/200(0%) Minus/Plus
Query        3  MGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWRDVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNISVPREAHFIKTKTCRC*HQTC  602
                MGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWR VSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQG+INILDEYLSVSDI GFDVLFSDPYQNI++PREAHFIKTKTCR    TC
Subject   6356  MGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWRGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGRINILDEYLSVSDISGFDVLFSDPYQNINIPREAHFIKTKTCRFGANTC  6955

Range 2: 6356 to 6955 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
419.9 bits(910) 0.0 167/200(84%) 0/200(0%) Plus/Minus
Query        3  AGLVLTPASFGLYEVCLPWNADVLVRV*EQHIKTMNV*DRQVLIKYIYLPLHCTPWRVGLDVPSC*IWTVWYTGCKSHERLVFRNELPY*ATFTATWNTMNNNWKFKHAEHTNKFEC*QSLD*VIHNTHITPNT*GLNNNLKQTRN*APHFVLIPNQETHAVIMRFNFLLSHHAYR*FSKSIGIRHLNCIIINAIFQIAH  602
                AG+   PASF LYEVCLPWN DVLV V*EQH+KT NV DRQ+LIKYIY PLHCTPWRVGLDVPSC*IWTVW+T CKSH+RLV RNELPY ATFTATWNTM+NNWKFK+ EHTNKF+C QSLD*VIHNTH TPNT*GLNNNLKQTRN*APHF+ I NQETH VIMR NFLLSHH YR FSKS+ IRHLNC+IINAIFQIAH
Subject   6356  AGVSTKPASFSLYEVCLPWNVDVLVGV*EQHVKTRNVRDRQILIKYIYPPLHCTPWRVGLDVPSC*IWTVWHTRCKSHKRLVLRNELPYQATFTATWNTMDNNWKFKYTEHTNKFKCRQSLD*VIHNTHTTPNT*GLNNNLKQTRN*APHFMFISNQETHTVIMRLNFLLSHHTYRQFSKSVSIRHLNCVIINAIFQIAH  6955

Range 3: 6357 to 6956 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
389.6 bits(844) 0.0 168/200(84%) 0/200(0%) Plus/Minus
Query        2  CRFGANTCKFWSL*SVPPLER*CSGKGLRTAHQNHECLRQTSTHQVYLSSLALHTLESRA*CTFLLDLDCLVHRL*KPRKTRLQK*APLLGYFYRYLEHYEQQLEI*ARRTHQQIRMLTKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSFCAYSEPGNARSYNALQLPPQSSRL*IILQVYRHKTPQLHNYQCNFPNCP  601
                CR    TCKF SL*SVPPLE *CSG+GLRTA QN +C RQT+THQVYLSSLALHTLESRA*CTFLLDLDCL H L*KP+KTR QK*APL GYFYRYLEHY QQLEI*  RTHQQI+M TKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSF  Y EPGNA SYNA QLPPQSS L* ILQV +HKTPQL NYQCNFPNCP
Subject   6357  CRC*HQTCKF*SL*SVPPLEC*CSGRGLRTARQNQKCQRQTNTHQVYLSSLALHTLESRA*CTFLLDLDCLAHPL*KPQKTRPQK*APLSGYFYRYLEHYGQQLEI*VHRTHQQIQMQTKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSFYVYFEPGNAHSYNAPQLPPQSSHL*TILQVCKHKTPQLRNYQCNFPNCP  6956

Range 4: 6357 to 6956 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
360.3 bits(780) 0.0 168/200(84%) 0/200(0%) Minus/Plus
Query        2  WAIWKIALIIMQLRCLMPIDLENYL*A**LRRKLKRIITACVSWFGISTK*GAQFLVCLRLLFRP*VFGVM*VL*IT*SRLCQHSNLLVCSACLNFQLLFIVFQVAVKVA**GSSFLKTSLSWLLQPVYQTVQI*QEGTSSPTLQGVQCKGR*IYLMSTCLSQTFMVLMCCSQTLTRTSAFQGRHTS*RPKLAGVSTKPA  601
                WAIWKIALII QLRCLM  DLEN L* **LRRKL+RIIT CVSWF I+ K*GAQFLVCLRLLFRP*VFGV+*VL*IT*SRLC H NLLVCS  LNFQLL IVFQVAVKVA**GSSFL+TSL WLLQ V QTVQI*QEGTSSPTLQGVQCKG *IYLMS CLS TF+VL CCSQT TRTS FQGRHTS*R KLAG+   PA
Subject   6357  WAIWKIALIITQLRCLMLTDLENCL*V**LRRKLRRIITVCVSWFEINIK*GAQFLVCLRLLFRP*VFGVV*VL*IT*SRLCLHLNLLVCSVYLNFQLLSIVFQVAVKVA**GSSFLRTSLLWLLQRVCQTVQI*QEGTSSPTLQGVQCKGG*IYLMSICLSLTFLVLTCCSQTPTRTSTFQGRHTS*RLKLAGLVLTPA  6956

Range 5: 6685 to 6957 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
191.2 bits(411) 0.0 84/91(92%) 0/91(0%) Plus/Minus
Query        1  LQVWC*HLQVLVFMKCASLGTLMFW*GSENSTSKP*MSETDKYSSSIFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR  273
                LQV   +LQVLVFMKCASLG LMFW*GSENSTSKP MSETDKYSSSIFI PCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR
Subject   6685  LQVLAPNLQVLVFMKCASLGMLMFW*GSENSTSKPEMSETDKYSSSIFILPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR  6957

Range 6: 6355 to 6615 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
186.2 bits(400) 0.0 86/87(99%) 0/87(0%) Plus/Minus
Query      343  NSNADKALTKLFIILTSRQTLKA*TITSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPI  603
                NSNADKALTKLFIILT RQTLKA*TITSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPI
Subject   6355  NSNADKALTKLFIILTPRQTLKA*TITSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPI  6615

Range 7: 6355 to 6957 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
355.7 bits(770) 0.0 171/201(85%) 0/201(0%) Minus/Plus
Query        1  NGQFGKLH**LCN*GVLCL*TWRIIYRRDD*GGS*SAL*LRAFPGSE*AQNEVLNFWFV*GYCLGLKCLA*CEYYE*LSQGFVSIRICWCVLRA*IXXXXXXXSR*R*K*PNKGAHF*RRVFRGFYSRCTRQSKSNRKVHQALLSRVCSAREDKYT**VLVCLRHSWF*CAVLRPLPEHQRSKGGTLHKDQNLQVLAPNLQ  603
                NGQFGKLH**L N*GVLCL TWRI+YR DD*GGS* AL*L AFPGS+*  NEVLNFWFV*GYCLGLKCLA CEYYE*LSQGFV I ICWCVL  *ISSCC *CSR*R*K*P+KGAHF* RVF GFYS C RQSKSNRKVHQALLSRVCSAREDKYT**V VCL H WF* AVLRPLPEHQ SKGGTLHKD NLQV   +LQ
Subject   6355  NGQFGKLH**LRN*GVLCLQTWRIVYRCDD*GGS*GAL*LCAFPGSK*T*NEVLNFWFV*GYCLGLKCLAWCEYYE*LSQGFVCI*ICWCVLCT*ISSCCP*CSR*R*K*PDKGAHF*GRVFCGFYSGCARQSKSNRKVHQALLSRVCSAREDKYT**VFVCL*HFWF*RAVLRPLPEHQHSKGGTLHKD*NLQVWC*HLQ  6957

Rupestris stem pitting associated virus strain BS, complete genome

Sequence ID: AY881627.1 Length: 8743 Number of Matches: 7

Range 1: 6355 to 6954 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
452.4 bits(981) 0.0 191/200(96%) 0/200(0%) Minus/Plus
Query        3  MGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWRDVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNISVPREAHFIKTKTCRC*HQTC  602
                MGNLENCIDNYAIEVSYAYRLGELS GVMTEEEVEAHYNCVRFLVRNKHKMRCSIS LFEVIV*ALSVWR VSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDI GFDVLFSDPYQNIS+PREAHFIKTKTCR    TC
Subject   6355  MGNLENCIDNYAIEVSYAYRLGELSTGVMTEEEVEAHYNCVRFLVRNKHKMRCSISSLFEVIV*ALSVWRGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDISGFDVLFSDPYQNISIPREAHFIKTKTCRFGANTC  6954

Range 2: 6355 to 6954 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
422.6 bits(916) 0.0 169/200(84%) 0/200(0%) Plus/Minus
Query        3  AGLVLTPASFGLYEVCLPWNADVLVRV*EQHIKTMNV*DRQVLIKYIYLPLHCTPWRVGLDVPSC*IWTVWYTGCKSHERLVFRNELPY*ATFTATWNTMNNNWKFKHAEHTNKFEC*QSLD*VIHNTHITPNT*GLNNNLKQTRN*APHFVLIPNQETHAVIMRFNFLLSHHAYR*FSKSIGIRHLNCIIINAIFQIAH  602
                AG+   PA FGLYEVCLPWNADVLV V*EQHIKT N+ DRQVLIKYIYLPLHCTPWRVGLDVPSC*IWTVW+T CKSH+R V R+ELPY*ATFT TWNTMNNNWKFKH EHTNKF+C QSLD*VIHNTH TPNT*GL+NN KQTRN*APHF+LI NQETH VIMRFNFLL HH  R FSKS+ IRHLNCIIINAIFQIAH
Subject   6355  AGVSTKPAGFGLYEVCLPWNADVLVGV*EQHIKTRNIRDRQVLIKYIYLPLHCTPWRVGLDVPSC*IWTVWHTRCKSHKRFVLRDELPY*ATFTTTWNTMNNNWKFKHTEHTNKFKCRQSLD*VIHNTHTTPNT*GLDNNFKQTRN*APHFMLISNQETHTVIMRFNFLLGHHTSRQFSKSVSIRHLNCIIINAIFQIAH  6954

Range 3: 6356 to 6955 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
387.8 bits(840) 0.0 166/200(83%) 0/200(0%) Plus/Minus
Query        2  CRFGANTCKFWSL*SVPPLER*CSGKGLRTAHQNHECLRQTSTHQVYLSSLALHTLESRA*CTFLLDLDCLVHRL*KPRKTRLQK*APLLGYFYRYLEHYEQQLEI*ARRTHQQIRMLTKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSFCAYSEPGNARSYNALQLPPQSSRL*IILQVYRHKTPQLHNYQCNFPNCP  601
                CR    TC+FWSL*SVPPLE *C G+GLRTAHQN +  RQTSTHQVYLSSLALHTLESRA*CTFLLDLDCL H L*KP+K R Q+*APLLGYFY YLEHYEQQLEI*A RTHQQI+M TKP*LSYS*YSHHAKHLRP+Q* QTN KLSTSF AY EPGNA SYNALQLPP+SS  * ILQV +HKTPQLHNYQCNFPNCP
Subject   6356  CRC*HQTCRFWSL*SVPPLEC*CFGRGLRTAHQNQKYQRQTSTHQVYLSSLALHTLESRA*CTFLLDLDCLAHPL*KPQKIRPQR*APLLGYFYHYLEHYEQQLEI*AHRTHQQIQMQTKP*LSYS*YSHHAKHLRPRQ*LQTN*KLSTSFYAYFEPGNAHSYNALQLPPRSSHQ*TILQVCKHKTPQLHNYQCNFPNCP  6955

Range 4: 6356 to 6955 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
364.9 bits(790) 0.0 168/200(84%) 0/200(0%) Minus/Plus
Query        2  WAIWKIALIIMQLRCLMPIDLENYL*A**LRRKLKRIITACVSWFGISTK*GAQFLVCLRLLFRP*VFGVM*VL*IT*SRLCQHSNLLVCSACLNFQLLFIVFQVAVKVA**GSSFLKTSLSWLLQPVYQTVQI*QEGTSSPTLQGVQCKGR*IYLMSTCLSQTFMVLMCCSQTLTRTSAFQGRHTS*RPKLAGVSTKPA  601
                WAIWKIALIIMQLRCLM  DLEN L  ** RRKLKRIIT CVSWF IS K*GAQFLVCL+LL RP*VFGV+*VL*IT*SRLC H NLLVCS CLNFQLLFIVFQV VKVA**GSS L+T+L WLLQ V QTVQI*QEGTSSPTLQGVQCKGR*IYLMSTCLS  F+VLMCCSQT T+TSAFQGRHTS*RPK AG+   PA
Subject   6356  WAIWKIALIIMQLRCLMLTDLENCLLV**PRRKLKRIITVCVSWFEISIK*GAQFLVCLKLLSRP*VFGVV*VL*IT*SRLCLHLNLLVCSVCLNFQLLFIVFQVVVKVA**GSSSLRTNLLWLLQRVCQTVQI*QEGTSSPTLQGVQCKGR*IYLMSTCLSLIFLVLMCCSQTPTKTSAFQGRHTS*RPKPAGLVLTPA  6955

Range 5: 6354 to 6956 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
353.4 bits(765) 0.0 171/201(85%) 0/201(0%) Minus/Plus
Query        1  NGQFGKLH**LCN*GVLCL*TWRIIYRRDD*GGS*SAL*LRAFPGSE*AQNEVLNFWFV*GYCLGLKCLA*CEYYE*LSQGFVSIRICWCVLRA*IXXXXXXXSR*R*K*PNKGAHF*RRVFRGFYSRCTRQSKSNRKVHQALLSRVCSAREDKYT**VLVCLRHSWF*CAVLRPLPEHQRSKGGTLHKDQNLQVLAPNLQ  603
                NGQFGKLH**LCN*GVLCL TWRI+Y  DD GGS*SAL*L AFPGS+*A NEVLNF FV* YCLGLKCLA CEYYE*LSQGFV I ICWCVL A*ISSCCS*CSR* *K*PNKGAH * R+F GFYS C RQSKSNRKVHQALLSRVCSAREDKYT**VLVCL + WF*CAVLRPLP+HQ SKGGTLHKDQNLQV   +LQ
Subject   6354  NGQFGKLH**LCN*GVLCLQTWRIVYWCDDRGGS*SAL*LCAFPGSK*A*NEVLNF*FV*SYCLGLKCLAWCEYYE*LSQGFVCI*ICWCVLCA*ISSCCS*CSR*W*K*PNKGAHL*GRIFCGFYSGCARQSKSNRKVHQALLSRVCSAREDKYT**VLVCL*YFWF*CAVLRPLPKHQHSKGGTLHKDQNLQVWC*HLQ  6956

Range 6: 6684 to 6956 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
192.1 bits(413) 0.0 84/91(92%) 0/91(0%) Plus/Minus
Query        1  LQVWC*HLQVLVFMKCASLGTLMFW*GSENSTSKP*MSETDKYSSSIFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR  273
                LQV   +LQVLVFMKCASLG LMFW*GSENSTSKP +SETDKYSSSIFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR
Subject   6684  LQVLAPNLQVLVFMKCASLGMLMFW*GSENSTSKPEISETDKYSSSIFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR  6956

Range 7: 6354 to 6614 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
181.1 bits(389) 0.0 84/87(97%) 0/87(0%) Plus/Minus
Query      343  NSNADKALTKLFIILTSRQTLKA*TITSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPI  603
                NSNADKALTKLFIILT RQTLKA*TITSNK EIEHLILCLFRTRKRTQL*CASTSSSVITP+DNSPSL*A*DTSIA*LSMQFSKLPI
Subject   6354  NSNADKALTKLFIILTPRQTLKA*TITSNKLEIEHLILCLFRTRKRTQL*CASTSSSVITPVDNSPSL*A*DTSIA*LSMQFSKLPI  6614

Nucleotide Sequence (303 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 33 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
31
62
93
124
155
186
217
248
279
303

Descriptions

Alignments

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 7

Range 1: 1192 to 1491 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
243.5 bits(525) 0.0 100/100(100%) 0/100(0%) Minus/Plus
Query        3  GSLLMPNIPKLVISFFCRMMPNALARLSSNFRESSLDSFVYALEPFNFSISLIDITPDFFEHLFLFSCLNELIEDNVEEVMDNSWFGLSNAQFDRQRCPF  302
                GSLLMPNIPKLVISFFCRMMPNALARLSSNFRESSLDSFVYALEPFNFSISLIDITPDFFEHLFLFSCLNELIEDNVEEVMDNSWFGLSNAQFDRQRCPF
Subject   1192  GSLLMPNIPKLVISFFCRMMPNALARLSSNFRESSLDSFVYALEPFNFSISLIDITPDFFEHLFLFSCLNELIEDNVEEVMDNSWFGLSNAQFDRQRCPF  1491

Range 2: 1192 to 1491 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
228.8 bits(493) 0.0 97/100(97%) 0/100(0%) Plus/Minus
Query        3  EGTPLTIKLCIA*PKPRVVHNFLNIILDQFIETREQEKVLKEVRSNVYEAY*EVERFKCIHK*VQRGLTKI**KPSQSIWHHSTKERDDQLWNIWH*QGA  302
                EGTPLTIKLCIA*PKP VVHNFLNIILDQFIETREQEKVLKEVRSN+YEAY*EVERFKCIHK*VQRGLTKI**KPSQSIWHHSTKERDD LWNIWH*QGA
Subject   1192  EGTPLTIKLCIA*PKP*VVHNFLNIILDQFIETREQEKVLKEVRSNIYEAY*EVERFKCIHK*VQRGLTKI**KPSQSIWHHSTKERDD*LWNIWH*QGA  1491

Range 3: 1193 to 1492 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
221.0 bits(476) 0.0 97/100(97%) 0/100(0%) Plus/Minus
Query        2  RRDTFDDQTVHCLAQTTSCP*LPQHYPRSIH*DKRTGKGAQRSQE*CL*GLLRS*KVQVHTQMSPKRTHENLMKA*PEHLASFYKRKR*PALEYLALAGS  301
                RRDTFDDQTVHCLAQT SCP*LPQHYPRSIH*DKRTGKGAQRSQE* L*GLLRS*KVQVHTQMSPKRTHENLMKA*PEHLASFYKRKR* ALEYLALAGS
Subject   1193  RRDTFDDQTVHCLAQTMSCP*LPQHYPRSIH*DKRTGKGAQRSQE*YL*GLLRS*KVQVHTQMSPKRTHENLMKA*PEHLASFYKRKR*LALEYLALAGS  1492

Range 4: 1194 to 1493 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
218.3 bits(470) 0.0 97/100(97%) 0/100(0%) Minus/Plus
Query        1  LPANAKYSKAGHLFLL*NDAKCSG*AFIKFS*VLFGLICVCT*TFQLLNKPHRHYS*LL*APFPVLLSQ*IDRG*C*GSYGQLVVWAKQCTV*SSKVSLL  300
                LPANAKYSKA HLFLL*NDAKCSG*AFIKFS*VLFGLICVCT*TFQLLNKPHR+YS*LL*APFPVLLSQ*IDRG*C*GSYGQL+VWAKQCTV*SSKVSLL
Subject   1194  LPANAKYSKASHLFLL*NDAKCSG*AFIKFS*VLFGLICVCT*TFQLLNKPHRYYS*LL*APFPVLLSQ*IDRG*C*GSYGQLMVWAKQCTV*SSKVSLL  1493

Range 5: 1191 to 1493 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
195.3 bits(420) 0.0 100/101(99%) 0/101(0%) Plus/Minus
Query        1  EKGHL*RSNCALLSPNHEXXXXXXXXXXXXXXRQENRKRCSKKSGVMSMRLIEKLKGSSAYTNESKEDSRKFDESLARAFGIILQKKEMTSFGIFGISREP  303
                EKGHL*RSNCALLSPNHELSITSSTLSSINSLRQENRKRCSKKSGV+SMRLIEKLKGSSAYTNESKEDSRKFDESLARAFGIILQKKEMTSFGIFGISREP
Subject   1191  EKGHL*RSNCALLSPNHELSITSSTLSSINSLRQENRKRCSKKSGVISMRLIEKLKGSSAYTNESKEDSRKFDESLARAFGIILQKKEMTSFGIFGISREP  1493

Range 6: 1193 to 1318 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
105.5 bits(224) 0.0 41/42(98%) 0/42(0%) Minus/Plus
Query      176  APC*CQIFQSWSSLSFVE*CQMLWLGFHQIFVSPLWTHLCMH  301
                APC*CQIFQS SSLSFVE*CQMLWLGFHQIFVSPLWTHLCMH
Subject   1193  APC*CQIFQS*SSLSFVE*CQMLWLGFHQIFVSPLWTHLCMH  1318

Range 7: 1400 to 1492 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
69.3 bits(145) 0.0 30/31(97%) 0/31(0%) Minus/Plus
Query        2  MN*SRIMLRKLWTTRGLG*AMHSLIVKGVPS  94
                MN*SRIMLRKLWTT GLG*AMHSLIVKGVPS
Subject   1400  MN*SRIMLRKLWTTHGLG*AMHSLIVKGVPS  1492

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 7

Range 1: 1192 to 1491 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
243.5 bits(525) 0.0 100/100(100%) 0/100(0%) Minus/Plus
Query        3  GSLLMPNIPKLVISFFCRMMPNALARLSSNFRESSLDSFVYALEPFNFSISLIDITPDFFEHLFLFSCLNELIEDNVEEVMDNSWFGLSNAQFDRQRCPF  302
                GSLLMPNIPKLVISFFCRMMPNALARLSSNFRESSLDSFVYALEPFNFSISLIDITPDFFEHLFLFSCLNELIEDNVEEVMDNSWFGLSNAQFDRQRCPF
Subject   1192  GSLLMPNIPKLVISFFCRMMPNALARLSSNFRESSLDSFVYALEPFNFSISLIDITPDFFEHLFLFSCLNELIEDNVEEVMDNSWFGLSNAQFDRQRCPF  1491

Range 2: 1192 to 1491 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
203.1 bits(437) 0.0 84/100(84%) 0/100(0%) Plus/Minus
Query        3  EGTPLTIKLCIA*PKPRVVHNFLNIILDQFIETREQEKVLKEVRSNVYEAY*EVERFKCIHK*VQRGLTKI**KPSQSIWHHSTKERDDQLWNIWH*QGA  302
                EGTPLTIKLCIA PKPRVVH+ LNI+L QFI+TREQEKVLKEVRS++Y+AY*++ERFKCIHK*VQRGLTKI**KPSQSIWHHSTKE D+ LWN+WH*Q A
Subject   1192  EGTPLTIKLCIAQPKPRVVHDLLNIVLYQFIKTREQEKVLKEVRSDIYKAY*KIERFKCIHK*VQRGLTKI**KPSQSIWHHSTKEGDN*LWNVWH*QRA  1491

Range 3: 1193 to 1492 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
195.3 bits(420) 0.0 87/100(87%) 0/100(0%) Plus/Minus
Query        2  RRDTFDDQTVHCLAQTTSCP*LPQHYPRSIH*DKRTGKGAQRSQE*CL*GLLRS*KVQVHTQMSPKRTHENLMKA*PEHLASFYKRKR*PALEYLALAGS  301
                RRDTFDDQ VHC AQTTSCP* PQH P S+H*DKRTGKGAQRSQE* L*GLL++*KVQVHTQMSPKRTHENLMKA*PEHLASFYKR+R* ALE LALA S
Subject   1193  RRDTFDDQIVHCSAQTTSCP*PPQHCPLSVH*DKRTGKGAQRSQE*YL*GLLKN*KVQVHTQMSPKRTHENLMKA*PEHLASFYKRRR*LALECLALAES  1492

Range 4: 1191 to 1493 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
190.3 bits(409) 0.0 95/101(94%) 0/101(0%) Plus/Minus
Query        1  EKGHL*RSNCALLSPNHEXXXXXXXXXXXXXXRQENRKRCSKKSGVMSMRLIEKLKGSSAYTNESKEDSRKFDESLARAFGIILQKKEMTSFGIFGISREP  303
                EKGHL*RSNCALLSPNHELS+TSSTLSSI+SLRQENRKRCSKKSGV+S+RLIEKLKGSSAYTNESKEDSRKFDESLARAFGIILQKKE+TSFG+FGISREP
Subject   1191  EKGHL*RSNCALLSPNHELSMTSSTLSSISSLRQENRKRCSKKSGVISIRLIEKLKGSSAYTNESKEDSRKFDESLARAFGIILQKKEITSFGMFGISREP  1493

Range 5: 1194 to 1493 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
184.4 bits(396) 0.0 83/100(83%) 0/100(0%) Minus/Plus
Query        1  LPANAKYSKAGHLFLL*NDAKCSG*AFIKFS*VLFGLICVCT*TFQLLNKPHRHYS*LL*APFPVLLSQ*IDRG*C*GSYGQLVVWAKQCTV*SSKVSLL  300
                L ANAK+SKA +L LL*NDAKCSG*AFIKFS*VLFGLICVCT*TFQ  NKP+R++S*LL*APFPVLLS * DRG C*G +GQLVVWA+QCT+*SSKVSLL
Subject   1194  LSANAKHSKASYLLLL*NDAKCSG*AFIKFS*VLFGLICVCT*TFQFFNKPYRYHS*LL*APFPVLLS**TDRGQC*GGHGQLVVWAEQCTI*SSKVSLL  1493

Range 6: 1193 to 1318 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.7 bits(196) 0.0 37/42(88%) 0/42(0%) Minus/Plus
Query      176  APC*CQIFQSWSSLSFVE*CQMLWLGFHQIFVSPLWTHLCMH  301
                A C*CQ FQS  S SFVE*CQMLWLGFHQIFVSPLWTHLCMH
Subject   1193  ALC*CQTFQS*LSPSFVE*CQMLWLGFHQIFVSPLWTHLCMH  1318

Range 7: 1400 to 1492 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
60.2 bits(125) 0.0 26/31(84%) 0/31(0%) Minus/Plus
Query        2  MN*SRIMLRKLWTTRGLG*AMHSLIVKGVPS  94
                MN* R MLR+ WTTRGLG*AMH+LIVKGVPS
Subject   1400  MN**RTMLRRSWTTRGLG*AMHNLIVKGVPS  1492

Rupestris stem pitting associated virus strain BS, complete genome

Sequence ID: AY881627.1 Length: 8743 Number of Matches: 7

Range 1: 1192 to 1491 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
219.2 bits(472) 0.0 88/100(88%) 0/100(0%) Minus/Plus
Query        3  GSLLMPNIPKLVISFFCRMMPNALARLSSNFRESSLDSFVYALEPFNFSISLIDITPDFFEHLFLFSCLNELIEDNVEEVMDNSWFGLSNAQFDRQRCPF  302
                GSLLMPNI KLVISFFCRMMPNALARLSSNFRE SLDSFVY+LEPFNFS++L+DITPDFFEHLFLFSCLNELIE+NVEEVMDNSWFGL + QF+RQR PF
Subject   1192  GSLLMPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDITPDFFEHLFLFSCLNELIEENVEEVMDNSWFGLGDLQFNRQRAPF  1491

Range 2: 1191 to 1493 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
125.2 bits(267) 0.0 69/101(68%) 0/101(0%) Plus/Minus
Query        1  EKGHL*RSNCALLSPNHEXXXXXXXXXXXXXXRQENRKRCSKKSGVMSMRLIEKLKGSSAYTNESKEDSRKFDESLARAFGIILQKKEMTSFGIFGISREP  303
                + G L*R NC   SPN ELSITSST SSI+SLRQE R +CSKKSGV+S +L EKLKGS  YTNES E SRKF+ESLA A GII QKK++T+  IFG+S+EP
Subject   1191  KNGAL*RLNCKSPSPNQELSITSSTFSSISSLRQEKRNKCSKKSGVISTKLTEKLKGSREYTNESSEHSRKFEESLASALGIIRQKKDITNLEIFGMSKEP  1493

Range 3: 1192 to 1479 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
103.2 bits(219) 0.0 51/96(53%) 0/96(0%) Plus/Minus
Query       15  LTIKLCIA*PKPRVVHNFLNIILDQFIETREQEKVLKEVRSNVYEAY*EVERFKCIHK*VQRGLTKI**KPSQSIWHHSTKERDDQLWNIWH*QGA  302
                LTI+L I  PKPR+VHN  NI+LD FIE R+++ +LKE+RS+++   *EV+  K IHK*+Q  L++I* +PS+ I HHS +ER  Q  NI H Q A
Subject   1192  LTIELQIPEPKPRIVHNLFNILLD*FIEARKEK*MLKEIRSDIH*VD*EVKGLKGIHK*IQ*TLSEI*REPSKCIRHHSAEERYYQFRNIRHEQRA  1479

Range 4: 1200 to 1493 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.0 bits(166) 0.0 44/98(45%) 0/98(0%) Minus/Plus
Query        1  ANAKYSKAGHLFLL*NDAKCSG*AFIKFS*VLFGLICVCT*TFQLLNKPHRHYS*LL*APFPVLLSQ*IDRG*C*GSYGQLVVWAKQCTV*SSKVSLL  294
                A+A+Y   G++FLL NDA C+ *A  KF  V  G ICV  *   LL++   ++S* L*A   + L Q* +RG C*  YGQ +VWA+   + SS+  +L
Subject   1200  AHAEYF*IGNIFLLPNDA*CTC*ALFKFPRVFTGFICVFP*AL*LLSQLSGYHS*FL*AFISLFLPQ*TNRGEC*RGYGQFLVWARGFAIQSSESPVL  1493

Range 5: 1193 to 1477 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.7 bits(161) 0.0 46/95(48%) 0/95(0%) Plus/Minus
Query       17  DDQTVHCLAQTTSCP*LPQHYPRSIH*DKRTGKGAQRSQE*CL*GLLRS*KVQVHTQMSPKRTHENLMKA*PEHLASFYKRKR*PALEYLALAGS  301
                DD   +  AQT +CP*  QH PR +H* K+    AQR+QE*     LRS*+ Q +TQM+P  T  NL +A*  H ASF +RK  P  +Y A A S
Subject   1193  DD*IANPRAQTKNCP*PLQHSPRLVH*GKKREINAQRNQE*YPLS*LRS*RAQGNTQMNPVNTLGNLKRA*QVH*ASFGRRKILPI*KYSA*AKS  1477

Range 6: 1193 to 1315 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
44.1 bits(90) 0.0 21/41(51%) 0/41(0%) Minus/Plus
Query      179  APC*CQIFQSWSSLSFVE*CQMLWLGFHQIFVSPLWTHLCM  301
                A C C+IF +W  LS  E*C M  LG  QI  S  W HLC+
Subject   1193  ALCSCRIFLNW*YLSSAE*CLMHLLGSLQISESVHWIHLCI  1315

Range 7: 1400 to 1480 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
33.6 bits(67) 0.0 15/27(56%) 0/27(0%) Minus/Plus
Query       14  MN*SRIMLRKLWTTRGLG*AMHSLIVK  94
                MN*SR ML++LWT  GLG  + + IV+
Subject   1400  MN*SRRMLKRLWTILGLGSGICNSIVR  1480

Grapevine rupestris stem pitting associated virus isolate SK30, complete genome

Sequence ID: KX274277.1 Length: 8724 Number of Matches: 7

Range 1: 1192 to 1491 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
217.8 bits(469) 0.0 87/100(87%) 0/100(0%) Minus/Plus
Query        3  GSLLMPNIPKLVISFFCRMMPNALARLSSNFRESSLDSFVYALEPFNFSISLIDITPDFFEHLFLFSCLNELIEDNVEEVMDNSWFGLSNAQFDRQRCPF  302
                GSLL+PNI KLVISFFCRMMPNALARLSSNFRE SLDSFVY+LEPFNFS++L+DITPDFFEHLFLFSCLNELIE+NVEEVMDNSWFGL + QF+RQR PF
Subject   1192  GSLLLPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDITPDFFEHLFLFSCLNELIEENVEEVMDNSWFGLGDLQFNRQRAPF  1491

Range 2: 1191 to 1493 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.4 bits(263) 0.0 69/101(68%) 0/101(0%) Plus/Minus
Query        1  EKGHL*RSNCALLSPNHEXXXXXXXXXXXXXXRQENRKRCSKKSGVMSMRLIEKLKGSSAYTNESKEDSRKFDESLARAFGIILQKKEMTSFGIFGISREP  303
                + G L*R NC   SPN ELSITSST SSI+SLRQE R +CSKKSGV+S +L EKLKGS  YTNES E SRKF+ESLA A GII QKK++T+  IFG S+EP
Subject   1191  KNGAL*RLNCKSPSPNQELSITSSTFSSISSLRQEKRNKCSKKSGVISTKLTEKLKGSREYTNESSEHSRKFEESLASALGIIRQKKDITNLEIFGKSKEP  1493

Range 3: 1210 to 1479 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.2 bits(208) 0.0 47/90(52%) 0/90(0%) Plus/Minus
Query       15  LTIKLCIA*PKPRVVHNFLNIILDQFIETREQEKVLKEVRSNVYEAY*EVERFKCIHK*VQRGLTKI**KPSQSIWHHSTKERDDQLWNI  284
                LTI+L I  PKPR+VHN  NI+LD FIE R+++ +LKE+RS+++   *EV+  K IHK*+Q  L++I* +PS+ I HHS +ER  Q  +I
Subject   1210  LTIELQIPEPKPRIVHNLFNILLD*FIEARKEK*MLKEIRSDIH*VD*EVKGLKGIHK*IQ*TLSEI*GEPSKCIRHHSAEERYHQFRDI  1479

Range 4: 1200 to 1493 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
77.1 bits(162) 0.0 44/98(45%) 0/98(0%) Minus/Plus
Query        1  ANAKYSKAGHLFLL*NDAKCSG*AFIKFS*VLFGLICVCT*TFQLLNKPHRHYS*LL*APFPVLLSQ*IDRG*C*GSYGQLVVWAKQCTV*SSKVSLL  294
                A A+Y   G +FLL NDA C+ *A +KF  V  G ICV  *   LL++   ++S* L*A   + L Q* +RG C*  YGQ +VWA+   + SS+  +L
Subject   1200  ALAEYL*IGDIFLLPNDA*CTC*ALLKFPRVFTGFICVFP*AL*LLSQLSGYHS*FL*AFISLFLPQ*TNRGEC*RGYGQFLVWARGFAIQSSESPVL  1493

Range 5: 1193 to 1477 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
77.1 bits(162) 0.0 46/95(48%) 0/95(0%) Plus/Minus
Query       17  DDQTVHCLAQTTSCP*LPQHYPRSIH*DKRTGKGAQRSQE*CL*GLLRS*KVQVHTQMSPKRTHENLMKA*PEHLASFYKRKR*PALEYLALAGS  301
                DD   +  AQT +CP*  QH PR +H* K+    AQR+QE*     LRS*+ Q +TQM+P  T  NL +A*  H ASF +RK  P   Y A A S
Subject   1193  DD*IANPRAQTKNCP*PLQHSPRLVH*GKKREINAQRNQE*YPLS*LRS*RAQGNTQMNPVNTLGNLRRA*QVH*ASFGRRKISPI*RYSARAKS  1477

Range 6: 1193 to 1315 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.9 bits(83) 0.0 20/41(49%) 0/41(0%) Minus/Plus
Query      179  APC*CQIFQSWSSLSFVE*CQMLWLGFHQIFVSPLWTHLCM  301
                A C C+I  +W  LS  E*C M  LG  QI  S  W HLC+
Subject   1193  ALCSCRISLNW*YLSSAE*CLMHLLGSPQISESVHWIHLCI  1315

Range 7: 1400 to 1480 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
33.6 bits(67) 0.0 15/27(56%) 0/27(0%) Minus/Plus
Query       14  MN*SRIMLRKLWTTRGLG*AMHSLIVK  94
                MN*SR ML++LWT  GLG  + + IV+
Subject   1400  MN*SRRMLKRLWTILGLGSGICNSIVR  1480

Grapevine Rupestris stem pitting associated virus, complete genome

Sequence ID: AF026278.1 Length: 8725 Number of Matches: 8

Range 1: 1192 to 1491 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
216.9 bits(467) 0.0 87/100(87%) 0/100(0%) Minus/Plus
Query        3  GSLLMPNIPKLVISFFCRMMPNALARLSSNFRESSLDSFVYALEPFNFSISLIDITPDFFEHLFLFSCLNELIEDNVEEVMDNSWFGLSNAQFDRQRCPF  302
                GSLLMPNI KLVISFFCRMMPNALARLSS+FRE SLDSFVY+LEPFNFS++L+DITPDFFEHLFLFSCLNELIE+NVEEVMDNSWFGL + QF+RQR PF
Subject   1192  GSLLMPNISKLVISFFCRMMPNALARLSSSFRECSLDSFVYSLEPFNFSVNLVDITPDFFEHLFLFSCLNELIEENVEEVMDNSWFGLGDLQFNRQRAPF  1491

Range 2: 1191 to 1493 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
122.0 bits(260) 0.0 67/101(66%) 0/101(0%) Plus/Minus
Query        1  EKGHL*RSNCALLSPNHEXXXXXXXXXXXXXXRQENRKRCSKKSGVMSMRLIEKLKGSSAYTNESKEDSRKFDESLARAFGIILQKKEMTSFGIFGISREP  303
                + G L R NC   SPN ELS+TSST SSINS RQE R +CSKKSGV+S +L EKLKGSS YTNES E SRK +ESLA AFGII QK +MT+  + GIS+EP
Subject   1191  KNGALWRLNCKSPSPNQELSMTSSTFSSINSFRQEKRNKCSKKSGVISTKLTEKLKGSSEYTNESSEHSRKLEESLASAFGIIRQKNDMTNLEMLGISKEP  1493

Range 3: 1192 to 1491 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
93.2 bits(197) 0.0 44/100(44%) 0/100(0%) Plus/Minus
Query        3  EGTPLTIKLCIA*PKPRVVHNFLNIILDQFIETREQEKVLKEVRSNVYEAY*EVERFKCIHK*VQRGLTKI**KPSQSIWHHSTKERDDQLWNIWH*QGA  302
                E  PL I+L +   KPR+VH+ LN++LDQ I   E++ +LKE+RS ++    +++  K +HK*+ R L+K   KP + IWHH  KE  DQL N+ H Q A
Subject   1192  ERGPLAIEL*VPKSKPRIVHDLLNVLLDQLI*AGEEK*MLKEIRSYIH*IDGKIKGLK*VHK*I*RTLSKARRKPGECIWHHPAKE*YDQLRNVGHKQRA  1491

Range 4: 1200 to 1493 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.4 bits(132) 0.0 39/98(40%) 0/98(0%) Minus/Plus
Query        1  ANAKYSKAGHLFLL*NDAKCSG*AFIKFS*VLFGLICVCT*TFQLLNKPHRHYS*LL*APFPVLLSQ*IDRG*C*GSYGQLVVWAKQCTV*SSKVSLL  294
                A A++   GH+ LL +DAKC+  AF   S V    ICV T*      +   + S* L*A   +LL +*+DRG  *G +GQ +VW    T+ S +  +L
Subject   1200  AYAQHF*VGHIILLPDDAKCTRQAFF*LSRVFARFICVLT*AL*FFRQFSGYNS*FL*AFISLLLPK*VDRGER*GGHGQFLVWTWGLTIQSPEGPVL  1493

Range 5: 1358 to 1450 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.6 bits(78) 0.0 17/31(55%) 0/31(0%) Plus/Minus
Query       44  QTTSCP*LPQHYPRSIH*DKRTGKGAQRSQE  136
                QT +CP* PQ  PRS H  +R    AQR+QE
Subject   1358  QTKNCP*PPQRSPRSTHLGRRREINAQRNQE  1450

Range 6: 1223 to 1336 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.9 bits(59) 0.0 18/38(47%) 0/38(0%) Plus/Minus
Query      158  RS*KVQVHTQMSPKRTHENLMKA*PEHLASFYKRKR*P  271
                ++*+ QV TQM+   T E+  KA   HLAS  KR  *P
Subject   1223  KN*RAQVSTQMNLANTLES*KKAWRVHLASSGKRMI*P  1336

Range 7: 1193 to 1318 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.9 bits(83) 0.0 21/42(50%) 0/42(0%) Minus/Plus
Query      176  APC*CQIFQSWSSLSFVE*CQMLWLGFHQIFVSPLWTHLCMH  301
                A C C  F SWS  SF  *CQM   GF   F S    HLC H
Subject   1193  ALCLCPTFLSWSYHSFAG*CQMHSPGFLLAFESVR*IHLCTH  1318

Range 8: 1400 to 1483 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
26.3 bits(51) 0.0 12/28(43%) 0/28(0%) Minus/Plus
Query       11  MN*SRIMLRKLWTTRGLG*AMHSLIVKG  94
                M+*SR  LR+ WT  GL    ++ I +G
Subject   1400  MS*SRRTLRRSWTILGLDLGTYNSIARG  1483

Nucleotide Sequence (388 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 33 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
39
78
117
156
195
234
273
312
351
388

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate SK30, complete genome

Sequence ID: KX274277.1 Length: 8724 Number of Matches: 8

Range 1: 4024 to 4383 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
278.7 bits(602) 0.0 117/120(98%) 0/120(0%) Plus/Plus
Query       27  ILGVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKSDLEMDDGCKVAKAGRSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQ  386
                + GVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKSDLEMDDGCKVAKAGRSKKEGW+VVTFEVFLRKVAGLKAGHCVIFDEVQ
Subject   4024  LTGVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKSDLEMDDGCKVAKAGRSKKEGWNVVTFEVFLRKVAGLKAGHCVIFDEVQ  4383

Range 2: 4020 to 4385 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
275.5 bits(595) 0.0 112/122(92%) 0/122(0%) Plus/Plus
Query       23  GYTWCDK**KV**CKTLAFWNINYRY*AKRANGCTWHIWGWEEFFVQKFHEEV*G*ICNFCFSKTSFSEFNQK*S*DG*WLQSCQGRQVKEGRVGCSNF*GLP*KSCWSEGWSLCDF**GPA  388
                G  WCDK *KV *CKTLAFW+INYRY*AKRANGCTWHIWGWEEFFVQ+FHEEV*G*ICNFCFSKTSFSEFN K*S*DG*WLQSCQGR VKEGRV CSNF*GLP*K CWSEGWSLCDF**GPA
Subject   4020  GPNWCDKR*KVQ*CKTLAFWHINYRY*AKRANGCTWHIWGWEEFFVQEFHEEV*G*ICNFCFSKTSFSEFN*K*S*DG*WLQSCQGR*VKEGRVECSNF*GLP*KGCWSEGWSLCDF**GPA  4385

Range 3: 4030 to 4383 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
268.7 bits(580) 0.0 111/118(94%) 0/118(0%) Minus/Minus
Query       33  LDLIKNHTVTSLQTSNFSKEDLKSYYIPPFLL*PACLGNFAAIIHLKITFD*IR*SSSWRNKSYKFTLRPLHETFVQKTLPSPKCAKYNR*LSWLNICS*YSRKPRFCITKLFITYHT  386
                LDLIKNHTVTSLQTSN SKEDLKSYYIPPFLL*P CLGNFAAIIHLKITF+*IR*SSSWRNKSYKFTLRPLHET VQKTLPSPKCAKYNR*LSWLNICS*Y+RKPRFCIT+LFI YHT
Subject   4030  LDLIKNHTVTSLQTSNLSKEDLKSYYIPPFLL*PTCLGNFAAIIHLKITFN*IR*SSSWRNKSYKFTLRPLHETLVQKTLPSPKCAKYNR*LSWLNICS*YARKPRFCITELFIAYHT  4383

Range 4: 4029 to 4385 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
267.7 bits(578) 0.0 117/119(98%) 0/119(0%) Minus/Minus
Query       32  SWTSSKITQ*PAFRPATFLRKTSKVTTSHPSFFDLPALATLQPSSISRSLLIEFAKARLGETKVTNLPSDLFMKLLYKKLFPAPNVPSTTVSSLGLISVVDIPESQGFASLNFSSLITP  388
                SWTSSKITQ*PAFRPATFLRKTSKVTT HPSFFDLPALATLQPSSISRSLLIEFAKARLGETKVTNLPSDLFMKLLYKKLFPAPNVPSTTVSSLGLISVVD+PESQGFASLNFSSLITP
Subject   4029  SWTSSKITQ*PAFRPATFLRKTSKVTTFHPSFFDLPALATLQPSSISRSLLIEFAKARLGETKVTNLPSDLFMKLLYKKLFPAPNVPSTTVSSLGLISVVDMPESQGFASLNFSSLITP  4385

Range 5: 4115 to 4384 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
209.1 bits(450) 0.0 86/90(96%) 0/90(0%) Minus/Minus
Query      118  AGPHQKSHSDQPSDQQLF*GRPQKLLHPTLPSLTCLPWQLCSHHPSQDHF*LNSLKLVLEKQKLQIYPQTSS*NFCTKNSSQPQMCQVQP  387
                AGPHQKSHSDQPSDQQ F*GRPQKLLH TLPSLT LPWQLCSHHPSQDHF*LNSLKLVLEKQKLQIYPQTSS*N CTKNSSQPQMCQVQP
Subject   4115  AGPHQKSHSDQPSDQQPF*GRPQKLLHSTLPSLTYLPWQLCSHHPSQDHF*LNSLKLVLEKQKLQIYPQTSS*NSCTKNSSQPQMCQVQP  4384

Range 6: 4019 to 4084 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
44.6 bits(91) 0.0 18/22(82%) 0/22(0%) Minus/Minus
Query       22  IFQKAKVLHH*TFHHLSHQVYP  87
                I QKAKVLHH*TFH LSHQ+ P
Subject   4019  ICQKAKVLHH*TFHRLSHQLGP  4084

Range 7: 4028 to 4189 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
108.7 bits(231) 0.0 50/54(93%) 0/54(0%) Plus/Plus
Query       31  LV**VMKSLVMQNLGFLEYQLQILSQES*RLYLAHLGLGRVFCTKVS*RGLRVN  192
                LV** MKS VMQNLGFL YQLQILSQES*RLYLAHLGLGRVFCT+VS*RGLRVN
Subject   4028  LV**AMKSSVMQNLGFLAYQLQILSQES*RLYLAHLGLGRVFCTRVS*RGLRVN  4189

Range 8: 4223 to 4306 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.4 bits(132) 0.0 26/28(93%) 0/28(0%) Plus/Plus
Query      226  RIQSKVILRWMMAAKLPRQAGQRRKGGM  309
                RIQ KVILRWMMAAKLPRQ GQRRKGGM
Subject   4223  RIQLKVILRWMMAAKLPRQVGQRRKGGM  4306

Rupestris stem pitting associated virus 1, complete genome

Sequence ID: AF057136.1 Length: 8744 Number of Matches: 8

Range 1: 4025 to 4384 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
276.9 bits(598) 0.0 116/120(97%) 0/120(0%) Plus/Plus
Query       27  ILGVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKSDLEMDDGCKVAKAGRSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQ  386
                + GVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK+DLEMDD CKVAKAGRSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQ
Subject   4025  LTGVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDSCKVAKAGRSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQ  4384

Range 2: 4030 to 4386 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
258.1 bits(557) 0.0 113/119(95%) 0/119(0%) Minus/Minus
Query       32  SWTSSKITQ*PAFRPATFLRKTSKVTTSHPSFFDLPALATLQPSSISRSLLIEFAKARLGETKVTNLPSDLFMKLLYKKLFPAPNVPSTTVSSLGLISVVDIPESQGFASLNFSSLITP  388
                +WTSSKITQ PAF PATFLRKTSKVTTSHPSFFDLPALATLQ SSISRS LIEFAKARLGETKVTNLPSDLFMKLLYKKLFPAPNVPSTTV+SLGLISVVDIPESQGFASLNFSSLITP
Subject   4030  NWTSSKITQWPAFNPATFLRKTSKVTTSHPSFFDLPALATLQLSSISRSFLIEFAKARLGETKVTNLPSDLFMKLLYKKLFPAPNVPSTTVNSLGLISVVDIPESQGFASLNFSSLITP  4386

Range 3: 4034 to 4384 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
209.1 bits(450) 0.0 87/117(74%) 0/117(0%) Minus/Minus
Query       36  LDLIKNHTVTSLQTSNFSKEDLKSYYIPPFLL*PACLGNFAAIIHLKITFD*IR*SSSWRNKSYKFTLRPLHETFVQKTLPSPKCAKYNR*LSWLNICS*YSRKPRFCITKLFITYH  386
                LDLIKNHTV SLQ+ NFSKE+LKSYYIPPFLL*P C  NFAAIIH KI FD*I *S+S RNK Y+FTLRP HET VQ+TLPSPKC K++    WLNI S Y+RKPRFCIT+L ITY+
Subject   4034  LDLIKNHTVASLQSCNFSKENLKSYYIPPFLL*PTCFSNFAAIIHFKIIFD*IC*STSGRNKGYEFTLRPFHETLVQETLPSPKCTKHDSQFPWLNISSRYTRKPRFCITELLITYN  4384

Range 4: 4021 to 4383 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.4 bits(418) 0.0 88/121(73%) 0/121(0%) Plus/Plus
Query       23  GYTWCDK**KV**CKTLAFWNINYRY*AKRANGCTWHIWGWEEFFVQKFHEEV*G*ICNFCFSKTSFSEFNQK*S*DG*WLQSCQGRQVKEGRVGCSNF*GLP*KSCWSEGWSLCDF**GP  385
                G  W  K**+V *CKTLAFW I Y Y*AK  +   W+IWGWEEF VQ+FHE+V*G*I N CFS+T FS+FNQK*S*+G* LQSC  R VKEGRVGCSNF*G P*KSC  EGW LCDF**GP
Subject   4021  GPNWRYK**EVQ*CKTLAFWYIYY*Y*AKGIDCRAWYIWGWEEFLVQEFHEKV*G*IRNLCFSQTCFSKFNQK*S*NG**LQSC*SR*VKEGRVGCSNF*GFP*KSCRIEGWPLCDF**GP  4383

Range 5: 4119 to 4382 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
157.3 bits(337) 0.0 68/88(77%) 0/88(0%) Minus/Minus
Query      121  GPHQKSHSDQPSDQQLF*GRPQKLLHPTLPSLTCLPWQLCSHHPSQDHF*LNSLKLVLEKQKLQIYPQTSS*NFCTKNSSQPQMCQVQ  384
                GPHQKSHS QPS  QLF*G+PQKLLHPTLPSLT L  QLCS+HP QDHF*LN LK V EKQ+L+IYPQT S*N CT+NSSQPQM Q +
Subject   4119  GPHQKSHSGQPSILQLF*GKPQKLLHPTLPSLTYLL*QLCSYHPFQDHF*LNLLKHVWEKQRLRIYPQTFS*NSCTRNSSQPQMYQAR  4382

Range 6: 4020 to 4085 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
39.6 bits(80) 0.0 16/22(73%) 0/22(0%) Minus/Minus
Query       22  IFQKAKVLHH*TFHHLSHQVYP  87
                I+QKAKVLHH*T HHL  Q+ P
Subject   4020  IYQKAKVLHH*TSHHL*RQLGP  4085

Range 7: 4038 to 4190 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.7 bits(161) 0.0 37/51(73%) 0/51(0%) Plus/Plus
Query       40  *VMKSLVMQNLGFLEYQLQILSQES*RLYLAHLGLGRVFCTKVS*RGLRVN  192
                *VM+S VMQNLGFL Y L ILSQ +*   L HLGLGRV CT+VS*+GLRVN
Subject   4038  *VMRSSVMQNLGFLVYLLLILSQGN*LSCLVHLGLGRVSCTRVS*KGLRVN  4190

Range 8: 4224 to 4307 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.8 bits(111) 0.0 21/28(75%) 0/28(0%) Plus/Plus
Query      226  RIQSKVILRWMMAAKLPRQAGQRRKGGM  309
                +IQSK+IL+WM+AAKL +Q GQRRKGGM
Subject   4224  QIQSKMILKWMIAAKLLKQVGQRRKGGM  4307

Grapevine Rupestris stem pitting associated virus, complete genome

Sequence ID: AF026278.1 Length: 8725 Number of Matches: 8

Range 1: 4024 to 4383 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
276.9 bits(598) 0.0 116/120(97%) 0/120(0%) Plus/Plus
Query       27  ILGVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKSDLEMDDGCKVAKAGRSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQ  386
                + GVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK+DLEMDD CKVAKAGRSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQ
Subject   4024  LTGVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDSCKVAKAGRSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQ  4383

Range 2: 4029 to 4385 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
258.1 bits(557) 0.0 113/119(95%) 0/119(0%) Minus/Minus
Query       32  SWTSSKITQ*PAFRPATFLRKTSKVTTSHPSFFDLPALATLQPSSISRSLLIEFAKARLGETKVTNLPSDLFMKLLYKKLFPAPNVPSTTVSSLGLISVVDIPESQGFASLNFSSLITP  388
                +WTSSKITQ PAF PATFLRKTSKVTTSHPSFFDLPALATLQ SSISRS LIEFAKARLGETKVTNLPSDLFMKLLYKKLFPAPNVPSTTV+SLGLISVVDIPESQGFASLNFSSLITP
Subject   4029  NWTSSKITQWPAFNPATFLRKTSKVTTSHPSFFDLPALATLQLSSISRSFLIEFAKARLGETKVTNLPSDLFMKLLYKKLFPAPNVPSTTVNSLGLISVVDIPESQGFASLNFSSLITP  4385

Range 3: 4033 to 4383 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
208.2 bits(448) 0.0 87/117(74%) 0/117(0%) Minus/Minus
Query       36  LDLIKNHTVTSLQTSNFSKEDLKSYYIPPFLL*PACLGNFAAIIHLKITFD*IR*SSSWRNKSYKFTLRPLHETFVQKTLPSPKCAKYNR*LSWLNICS*YSRKPRFCITKLFITYH  386
                LDLIKNHTV SLQ+ NFS+E+LKSYYIPPFLL*P C GNFAAIIH KI FD*I *S+S RNK Y+ TLRP HET VQKTLPSPKC K++    WLNI S Y+RKPRFCIT+L ITY+
Subject   4033  LDLIKNHTVASLQSCNFSEENLKSYYIPPFLL*PTCFGNFAAIIHFKIIFD*IC*STSGRNKGYELTLRPFHETLVQKTLPSPKCTKHDSQFPWLNIRSRYTRKPRFCITELLITYN  4383

Range 4: 4020 to 4382 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
199.5 bits(429) 0.0 88/121(73%) 0/121(0%) Plus/Plus
Query       23  GYTWCDK**KV**CKTLAFWNINYRY*AKRANGCTWHIWGWEEFFVQKFHEEV*G*ICNFCFSKTSFSEFNQK*S*DG*WLQSCQGRQVKEGRVGCSNF*GLP*KSCWSEGWSLCDF**GP  385
                G  W  K**+V *CKTLAFW I Y Y*AK  +   W+IWGWEEFFVQ+FHE+V*G*+ N CFS+T FS+FNQK*S*+G* LQSCQ R VKEGRVGCSNF*G P KSC  EGW LCDF**GP
Subject   4020  GPNWRYK**EVQ*CKTLAFWYIYYGY*AKGIDCRAWYIWGWEEFFVQEFHEKV*G*VRNLCFSQTCFSKFNQK*S*NG**LQSCQSR*VKEGRVGCSNF*GFPQKSCRIEGWPLCDF**GP  4382

Range 5: 4118 to 4381 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
163.3 bits(350) 0.0 69/88(78%) 0/88(0%) Minus/Minus
Query      121  GPHQKSHSDQPSDQQLF*GRPQKLLHPTLPSLTCLPWQLCSHHPSQDHF*LNSLKLVLEKQKLQIYPQTSS*NFCTKNSSQPQMCQVQ  384
                GPHQKSHS QPS  QLF*G+PQKLLHPTLPSLT L WQLCS+HP QDHF*LN LK V EKQ+L+ YPQT S*N CTKNSSQPQM Q +
Subject   4118  GPHQKSHSGQPSILQLF*GKPQKLLHPTLPSLTYLLWQLCSYHPFQDHF*LNLLKHVWEKQRLRTYPQTFS*NSCTKNSSQPQMYQAR  4381

Range 6: 4019 to 4084 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
39.6 bits(80) 0.0 16/22(73%) 0/22(0%) Minus/Minus
Query       22  IFQKAKVLHH*TFHHLSHQVYP  87
                I+QKAKVLHH*T HHL  Q+ P
Subject   4019  IYQKAKVLHH*TSHHL*RQLGP  4084

Range 7: 4037 to 4189 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.4 bits(167) 0.0 37/51(73%) 0/51(0%) Plus/Plus
Query       40  *VMKSLVMQNLGFLEYQLQILSQES*RLYLAHLGLGRVFCTKVS*RGLRVN  192
                *VM+S VMQNLGFL Y L+ILSQ +*   L HLGLGRVFCT+VS*+GLRV+
Subject   4037  *VMRSSVMQNLGFLVYLLRILSQGN*LSCLVHLGLGRVFCTRVS*KGLRVS  4189

Range 8: 4223 to 4306 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.3 bits(121) 0.0 22/28(79%) 0/28(0%) Plus/Plus
Query      226  RIQSKVILRWMMAAKLPRQAGQRRKGGM  309
                +IQSK+IL+WM+AAKLP+Q GQRRKGGM
Subject   4223  QIQSKMILKWMIAAKLPKQVGQRRKGGM  4306

Rupestris stem pitting associated virus 1, complete genome

Sequence ID: NC_001948.1 Length: 8744 Number of Matches: 8

Range 1: 4025 to 4384 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
276.9 bits(598) 0.0 116/120(97%) 0/120(0%) Plus/Plus
Query       27  ILGVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKSDLEMDDGCKVAKAGRSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQ  386
                + GVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK+DLEMDD CKVAKAGRSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQ
Subject   4025  LTGVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDSCKVAKAGRSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQ  4384

Range 2: 4030 to 4386 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
258.1 bits(557) 0.0 113/119(95%) 0/119(0%) Minus/Minus
Query       32  SWTSSKITQ*PAFRPATFLRKTSKVTTSHPSFFDLPALATLQPSSISRSLLIEFAKARLGETKVTNLPSDLFMKLLYKKLFPAPNVPSTTVSSLGLISVVDIPESQGFASLNFSSLITP  388
                +WTSSKITQ PAF PATFLRKTSKVTTSHPSFFDLPALATLQ SSISRS LIEFAKARLGETKVTNLPSDLFMKLLYKKLFPAPNVPSTTV+SLGLISVVDIPESQGFASLNFSSLITP
Subject   4030  NWTSSKITQWPAFNPATFLRKTSKVTTSHPSFFDLPALATLQLSSISRSFLIEFAKARLGETKVTNLPSDLFMKLLYKKLFPAPNVPSTTVNSLGLISVVDIPESQGFASLNFSSLITP  4386

Range 3: 4034 to 4384 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
209.1 bits(450) 0.0 87/117(74%) 0/117(0%) Minus/Minus
Query       36  LDLIKNHTVTSLQTSNFSKEDLKSYYIPPFLL*PACLGNFAAIIHLKITFD*IR*SSSWRNKSYKFTLRPLHETFVQKTLPSPKCAKYNR*LSWLNICS*YSRKPRFCITKLFITYH  386
                LDLIKNHTV SLQ+ NFSKE+LKSYYIPPFLL*P C  NFAAIIH KI FD*I *S+S RNK Y+FTLRP HET VQ+TLPSPKC K++    WLNI S Y+RKPRFCIT+L ITY+
Subject   4034  LDLIKNHTVASLQSCNFSKENLKSYYIPPFLL*PTCFSNFAAIIHFKIIFD*IC*STSGRNKGYEFTLRPFHETLVQETLPSPKCTKHDSQFPWLNISSRYTRKPRFCITELLITYN  4384

Range 4: 4021 to 4383 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.4 bits(418) 0.0 88/121(73%) 0/121(0%) Plus/Plus
Query       23  GYTWCDK**KV**CKTLAFWNINYRY*AKRANGCTWHIWGWEEFFVQKFHEEV*G*ICNFCFSKTSFSEFNQK*S*DG*WLQSCQGRQVKEGRVGCSNF*GLP*KSCWSEGWSLCDF**GP  385
                G  W  K**+V *CKTLAFW I Y Y*AK  +   W+IWGWEEF VQ+FHE+V*G*I N CFS+T FS+FNQK*S*+G* LQSC  R VKEGRVGCSNF*G P*KSC  EGW LCDF**GP
Subject   4021  GPNWRYK**EVQ*CKTLAFWYIYY*Y*AKGIDCRAWYIWGWEEFLVQEFHEKV*G*IRNLCFSQTCFSKFNQK*S*NG**LQSC*SR*VKEGRVGCSNF*GFP*KSCRIEGWPLCDF**GP  4383

Range 5: 4119 to 4382 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
157.3 bits(337) 0.0 68/88(77%) 0/88(0%) Minus/Minus
Query      121  GPHQKSHSDQPSDQQLF*GRPQKLLHPTLPSLTCLPWQLCSHHPSQDHF*LNSLKLVLEKQKLQIYPQTSS*NFCTKNSSQPQMCQVQ  384
                GPHQKSHS QPS  QLF*G+PQKLLHPTLPSLT L  QLCS+HP QDHF*LN LK V EKQ+L+IYPQT S*N CT+NSSQPQM Q +
Subject   4119  GPHQKSHSGQPSILQLF*GKPQKLLHPTLPSLTYLL*QLCSYHPFQDHF*LNLLKHVWEKQRLRIYPQTFS*NSCTRNSSQPQMYQAR  4382

Range 6: 4020 to 4085 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
39.6 bits(80) 0.0 16/22(73%) 0/22(0%) Minus/Minus
Query       22  IFQKAKVLHH*TFHHLSHQVYP  87
                I+QKAKVLHH*T HHL  Q+ P
Subject   4020  IYQKAKVLHH*TSHHL*RQLGP  4085

Range 7: 4038 to 4190 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.7 bits(161) 0.0 37/51(73%) 0/51(0%) Plus/Plus
Query       40  *VMKSLVMQNLGFLEYQLQILSQES*RLYLAHLGLGRVFCTKVS*RGLRVN  192
                *VM+S VMQNLGFL Y L ILSQ +*   L HLGLGRV CT+VS*+GLRVN
Subject   4038  *VMRSSVMQNLGFLVYLLLILSQGN*LSCLVHLGLGRVSCTRVS*KGLRVN  4190

Range 8: 4224 to 4307 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.8 bits(111) 0.0 21/28(75%) 0/28(0%) Plus/Plus
Query      226  RIQSKVILRWMMAAKLPRQAGQRRKGGM  309
                +IQSK+IL+WM+AAKL +Q GQRRKGGM
Subject   4224  QIQSKMILKWMIAAKLLKQVGQRRKGGM  4307

UNVERIFIED: Grapevine rupestris stem pitting associated virus isolate TI_30 genomic sequence

Sequence ID: KT000368.1 Length: 8568 Number of Matches: 8

Range 1: 3965 to 4324 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
276.9 bits(598) 0.0 116/120(97%) 0/120(0%) Plus/Plus
Query       27  ILGVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKSDLEMDDGCKVAKAGRSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQ  386
                + GVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK+DLEMDD CKVAKAGRSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQ
Subject   3965  LTGVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDSCKVAKAGRSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQ  4324

Range 2: 3970 to 4326 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
258.1 bits(557) 0.0 113/119(95%) 0/119(0%) Minus/Minus
Query       32  SWTSSKITQ*PAFRPATFLRKTSKVTTSHPSFFDLPALATLQPSSISRSLLIEFAKARLGETKVTNLPSDLFMKLLYKKLFPAPNVPSTTVSSLGLISVVDIPESQGFASLNFSSLITP  388
                +WTSSKITQ PAF PATFLRKTSKVTTSHPSFFDLPALATLQ SSISRS LIEFAKARLGETKVTNLPSDLFMKLLYKKLFPAPNVPSTTV+SLGLISVVDIPESQGFASLNFSSLITP
Subject   3970  NWTSSKITQWPAFNPATFLRKTSKVTTSHPSFFDLPALATLQLSSISRSFLIEFAKARLGETKVTNLPSDLFMKLLYKKLFPAPNVPSTTVNSLGLISVVDIPESQGFASLNFSSLITP  4326

Range 3: 3974 to 4324 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
209.1 bits(450) 0.0 87/117(74%) 0/117(0%) Minus/Minus
Query       36  LDLIKNHTVTSLQTSNFSKEDLKSYYIPPFLL*PACLGNFAAIIHLKITFD*IR*SSSWRNKSYKFTLRPLHETFVQKTLPSPKCAKYNR*LSWLNICS*YSRKPRFCITKLFITYH  386
                LDLIKNHTV SLQ+ NFS+E+LKSYYIPPFLL*P C GNFAAIIH KI F+*I *S+S RNK Y+FTLRP HET VQ+TLPSPKC K+N    WLNI S Y+RKPRFCIT+L ITY+
Subject   3974  LDLIKNHTVASLQSCNFSEENLKSYYIPPFLL*PTCFGNFAAIIHFKIIFN*IC*STSGRNKGYEFTLRPFHETLVQETLPSPKCTKHNSQFPWLNIRSRYTRKPRFCITELLITYN  4324

Range 4: 3979 to 4323 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.9 bits(419) 0.0 86/115(75%) 0/115(0%) Plus/Plus
Query       41  K**KV**CKTLAFWNINYRY*AKRANGCTWHIWGWEEFFVQKFHEEV*G*ICNFCFSKTSFSEFNQK*S*DG*WLQSCQGRQVKEGRVGCSNF*GLP*KSCWSEGWSLCDF**GP  385
                K**+V *CKTLAFW I Y Y*AK  + C W+IWGWEEF VQ+FHE+V*G*I N CFS+T FS+FN K*S*+G* LQSCQ R VKEGRVGCSNF*G P KSC  EGW LCDF**GP
Subject   3979  K**EVQ*CKTLAFWYIYYGY*AKGIDCCAWYIWGWEEFLVQEFHEKV*G*IRNLCFSQTCFSKFN*K*S*NG**LQSCQSR*VKEGRVGCSNF*GFPQKSCRIEGWPLCDF**GP  4323

Range 5: 4059 to 4322 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
166.0 bits(356) 0.0 70/88(80%) 0/88(0%) Minus/Minus
Query      121  GPHQKSHSDQPSDQQLF*GRPQKLLHPTLPSLTCLPWQLCSHHPSQDHF*LNSLKLVLEKQKLQIYPQTSS*NFCTKNSSQPQMCQVQ  384
                GPHQKSHS QPS  QLF*G+PQKLLHPTLPSLT L WQLCS+HP QDHF*LN LK V EKQ+L+IYPQT S*N CT+NSSQPQM Q Q
Subject   4059  GPHQKSHSGQPSILQLF*GKPQKLLHPTLPSLTYLLWQLCSYHPFQDHF*LNLLKHVWEKQRLRIYPQTFS*NSCTRNSSQPQMYQAQ  4322

Range 6: 3960 to 4025 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.7 bits(76) 0.0 15/22(68%) 0/22(0%) Minus/Minus
Query       22  IFQKAKVLHH*TFHHLSHQVYP  87
                I+QKAKVLHH*T HHL  ++ P
Subject   3960  IYQKAKVLHH*TSHHL*RRLGP  4025

Range 7: 3978 to 4130 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.8 bits(170) 0.0 38/51(75%) 0/51(0%) Plus/Plus
Query       40  *VMKSLVMQNLGFLEYQLQILSQES*RLYLAHLGLGRVFCTKVS*RGLRVN  192
                *VM+S VMQNLGFL Y L+ILSQ +* L L HLGLGRV CT+VS*+GLRVN
Subject   3978  *VMRSSVMQNLGFLVYLLRILSQGN*LLCLVHLGLGRVSCTRVS*KGLRVN  4130

Range 8: 4164 to 4247 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.6 bits(115) 0.0 21/28(75%) 0/28(0%) Plus/Plus
Query      226  RIQSKVILRWMMAAKLPRQAGQRRKGGM  309
                +IQ K+IL+WM+AAKLP+Q GQRRKGGM
Subject   4164  QIQLKMILKWMIAAKLPKQVGQRRKGGM  4247

Nucleotide Sequence (137 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 33 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
14
28
42
56
70
84
98
112
126
137

Descriptions

Alignments

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 5

Range 1: 6607 to 6741 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
100.5 bits(213) 0.0 43/45(96%) 0/45(0%) Minus/Plus
Query        1  FEFVGVYSVLRFPVVVHSVPGSGKSSLIRELISEDESFTAFTAGV  135
                FEFVGVYSVLRFPVVVHSVPGSGKSSLIRELI+EDESF AFTAGV
Subject   6607  FEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGV  6741

Range 2: 6607 to 6741 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.2 bits(176) 0.0 33/45(73%) 0/45(0%) Plus/Minus
Query        1  NSGCEGCETLVLRDELSYQTTFTATRNTMNDNWKSEHTIDTHKLK  135
                N+G E  ETLV  +ELSYQTTFT TRN MN+NWKSEH I+THKLK
Subject   6607  NAGRESYETLVFSNELSYQTTFTTTRNAMNNNWKSEHAINTHKLK  6741

Range 3: 6605 to 6736 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
77.6 bits(163) 0.0 35/44(80%) 0/44(0%) Plus/Minus
Query        6  RL*RL*NSRPQR*ALLSNYFYRYQEHYERQLEI*AHYRHPQTQT  137
                R *+L*NSR Q *ALLSNYFY YQE YE+QLEI*A Y+HPQTQT
Subject   6605  RP*KL*NSRLQ**ALLSNYFYHYQERYEQQLEI*ARYKHPQTQT  6736

Range 4: 6675 to 6737 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
39.6 bits(80) 0.0 17/21(81%) 0/21(0%) Minus/Plus
Query        5  *K*FDKRAHL*GREFHSLHSR  67
                *K*FDKRAH * REFHS H R
Subject   6675  *K*FDKRAHY*RREFHSFHGR  6737

Range 5: 6605 to 6658 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.7 bits(76) 0.0 15/18(83%) 0/18(0%) Minus/Plus
Query       84  RLSLWVSIVCSDFQLSFI  137
                RLSLWV I CSDFQL FI
Subject   6605  RLSLWVFIACSDFQLLFI  6658

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OB1

Sequence ID: AB277783.1 Length: 2876 Number of Matches: 3

Range 1: 863 to 997 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
99.6 bits(211) 0.0 41/45(91%) 0/45(0%) Minus/Plus
Query        1  FEFVGVYSVLRFPVVVHSVPGSGKSSLIRELISEDESFTAFTAGV  135
                FEFVG+YSVLRFPVVVHSVPGSGKSSLIREL++EDESF AFTAGV
Subject    863  FEFVGIYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGV  997

Range 2: 863 to 997 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.5 bits(161) 0.0 30/45(67%) 0/45(0%) Plus/Minus
Query        1  NSGCEGCETLVLRDELSYQTTFTATRNTMNDNWKSEHTIDTHKLK  135
                N+G +G ETLVL D+ SY T FT TRN +N+NWKSEH I+THKLK
Subject    863  NAGRKGYETLVLSDKFSY*TAFTTTRNAVNNNWKSEHAINTHKLK  997

Range 3: 861 to 992 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
65.7 bits(137) 0.0 31/44(70%) 0/44(0%) Plus/Minus
Query        6  RL*RL*NSRPQR*ALLSNYFYRYQEHYERQLEI*AHYRHPQTQT  137
                R *RL*NSRPQ   LL N FY YQE  E+QLEI*A Y++PQTQT
Subject    861  RP*RL*NSRPQ*QVLLLNCFYHYQERCEQQLEI*ARYKYPQTQT  992

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 5

Range 1: 6607 to 6741 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.7 bits(209) 0.0 41/45(91%) 0/45(0%) Minus/Plus
Query        1  FEFVGVYSVLRFPVVVHSVPGSGKSSLIRELISEDESFTAFTAGV  135
                FEFVGVYSVLRFPVVVHSVPGSGKSSLIREL++EDE+F AFTAGV
Subject   6607  FEFVGVYSVLRFPVVVHSVPGSGKSSLIRELVTEDENFIAFTAGV  6741

Range 2: 6607 to 6741 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.8 bits(164) 0.0 31/45(69%) 0/45(0%) Plus/Minus
Query        1  NSGCEGCETLVLRDELSYQTTFTATRNTMNDNWKSEHTIDTHKLK  135
                N+G +G E LVL D+ SY TTFT TRN MN+NWKSEH I+THKLK
Subject   6607  NAGRKGYEILVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLK  6741

Range 3: 6605 to 6736 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.7 bits(161) 0.0 34/44(77%) 0/44(0%) Plus/Minus
Query        6  RL*RL*NSRPQR*ALLSNYFYRYQEHYERQLEI*AHYRHPQTQT  137
                R *RL*NSRPQ   LL NYFY YQE YE+QLEI*A Y+HPQTQT
Subject   6605  RP*RL*NSRPQ*QVLLLNYFYHYQERYEQQLEI*ARYKHPQTQT  6736

Range 4: 6605 to 6658 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.7 bits(76) 0.0 15/18(83%) 0/18(0%) Minus/Plus
Query       84  RLSLWVSIVCSDFQLSFI  137
                RLSLWV I CSDFQL FI
Subject   6605  RLSLWVFIACSDFQLLFI  6658

Range 5: 6675 to 6737 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
32.2 bits(64) 0.0 15/21(71%) 0/21(0%) Minus/Plus
Query        5  *K*FDKRAHL*GREFHSLHSR  67
                *K*F+KR   *GREFHSL+ R
Subject   6675  *K*FNKRTCH*GREFHSLYGR  6737

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OE8

Sequence ID: AB277784.1 Length: 2876 Number of Matches: 3

Range 1: 863 to 997 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.2 bits(208) 0.0 40/45(89%) 0/45(0%) Minus/Plus
Query        1  FEFVGVYSVLRFPVVVHSVPGSGKSSLIRELISEDESFTAFTAGV  135
                FEF+GV+SVL+FPVV+HSVPGSGKSSLIRELISEDESF AFTAGV
Subject    863  FEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGV  997

Range 2: 863 to 997 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.8 bits(124) 0.0 26/45(58%) 0/45(0%) Plus/Minus
Query        1  NSGCEGCETLVLRDELSYQTTFTATRNTMNDNWKSEHTIDTHKLK  135
                N+ CE  ETLVL D L Y TT T TR+TM +NWK E+T +T+KL+
Subject    863  NTRCESHETLVL*D*LPY*TTLTTTRHTMYNNWKFEYTENTYKLE  997

Range 3: 876 to 974 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
44.6 bits(91) 0.0 20/33(61%) 0/33(0%) Plus/Minus
Query       24  NSRPQR*ALLSNYFYRYQEHYERQLEI*AHYRH  122
                NSRP R   L NY Y YQ HY  QLEI* H +H
Subject    876  NSRPLRLTPLLNYSYHYQAHYV*QLEI*VH*KH  974

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: Hiz6

Sequence ID: AB277786.1 Length: 2876 Number of Matches: 2

Range 1: 863 to 997 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.2 bits(208) 0.0 40/45(89%) 0/45(0%) Minus/Plus
Query        1  FEFVGVYSVLRFPVVVHSVPGSGKSSLIRELISEDESFTAFTAGV  135
                FEF+GV+SVL+FPVV+HSVPGSGKSSLIRELISEDESF AFTAGV
Subject    863  FEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGV  997

Range 2: 863 to 997 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.2 bits(116) 0.0 23/45(51%) 0/45(0%) Plus/Minus
Query        1  NSGCEGCETLVLRDELSYQTTFTATRNTMNDNWKSEHTIDTHKLK  135
                N+  +  +  VL D+L Y TTF  T +T+NDNWK EHT +T+KLK
Subject    863  NTCSKSHKAFVLGDQLPY*TTFATTWHTVNDNWKFEHTENTYKLK  997

Nucleotide Sequence (408 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 33 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
41
82
123
164
205
246
287
328
369
408

Descriptions

Alignments

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: Hai1

Sequence ID: AB277787.1 Length: 2876 Number of Matches: 7

Range 1: 2437 to 2829 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
313.1 bits(677) 0.0 131/131(100%) 0/131(0%) Plus/Plus
Query       12  GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE*G**WKQCS  404
                GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE*G**WKQCS
Subject   2437  GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE*G**WKQCS  2829

Range 2: 2436 to 2828 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
296.2 bits(640) 0.0 129/131(98%) 0/131(0%) Minus/Minus
Query       11  EHCFHYQPYSCVTFAKGLLISAPAVPPLISPRLELRFPSAIVCLSTLTSKEAILATISAFVGALLTPPLGSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSKWMFHTIFA*YMQNLRSVVTSLIIP  403
                EHCFHYQP+SCVTFAKGLLISAPAVPPLISPRLELRFPSAIVCLSTLTSKEAILATISAFVGALLTPPLGSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSK MFHTIFA*YMQNLRSVVTSLIIP
Subject   2436  EHCFHYQPHSCVTFAKGLLISAPAVPPLISPRLELRFPSAIVCLSTLTSKEAILATISAFVGALLTPPLGSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSK*MFHTIFA*YMQNLRSVVTSLIIP  2828

Range 3: 2437 to 2829 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
295.7 bits(639) 0.0 117/131(89%) 0/131(0%) Minus/Minus
Query       12  GALLPLSALFVRDVCKGVVDKRPSRSTTNFSKIGAPLSFSHSLSEHFDFKRGNISDHLCFCWSSLDTTLRFKRALICDSKEEVKGCKLFILIKSFLGPISWWYSRLQMDVPHNFRVVHAKSAQCGHLSYNS  404
                GALLPLS  F+R++CKGV++KRPSRSTTNFSKIGAPLSFSHSLSEHFDFKRGNIS+HLC CWSSLDTTLRFKRALICDSKEEVKGCKLFILIKSFLGPISWWYSRLQM+VPH+F VVHAKSAQCG+L YNS
Subject   2437  GALLPLSTSFMRNICKGVINKRPSRSTTNFSKIGAPLSFSHSLSEHFDFKRGNISNHLCLCWSSLDTTLRFKRALICDSKEEVKGCKLFILIKSFLGPISWWYSRLQMNVPHDFCVVHAKSAQCGYLPYNS  2829

Range 4: 2432 to 2833 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
279.7 bits(604) 0.0 119/134(89%) 0/134(0%) Plus/Plus
Query        7  ILEL*ER*PHCADFACTTRKLCGTSIWRREYHQLIGPRKDLMRMKSLQPLTSSLESQMRARLNLRVVSRELQQKQRWSLILPLLKSKCSDRLWLKESGAPILEKLVVERLGRLSTTPLQTSRTNKADSGSNAPN  408
                +LEL* R*PHCADFACTT+K CGT IWRREYHQLIGPRKDLMRMKSLQPLTSSLESQMRARLNLRVVSRELQQ+QRW LILPLLKSKCSDRLWLKESGAPILEKLVVERLGRL  TPLQ  R N+ DSGSNAP+
Subject   2432  LLEL*GR*PHCADFACTTQKSCGTFIWRREYHQLIGPRKDLMRMKSLQPLTSSLESQMRARLNLRVVSRELQQRQRWLLILPLLKSKCSDRLWLKESGAPILEKLVVERLGRLLITPLQMLRMNEVDSGSNAPS  2833

Range 5: 2436 to 2828 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
274.2 bits(592) 0.0 118/131(90%) 0/131(0%) Plus/Plus
Query       11  WNYKRGDHTAQILHVLRENCVEHPFGDGNTTS*LGQERI**E*KVCSL*LLPWSHR*ERA*T*GWCQESSNKSRDGR*YCLF*SQSAQTDYG*RKAELQSWRN*WWNGWGAYQQPLCKRHARIRLIVEAML  403
                WNYK G+HTAQILHVLR+N VEH FGDGNTTS*LGQERI**E*KVCSL*LLPWSHR*ERA*T*GWCQESSNK RDG *YCLF*SQSAQTDYG*RKAELQSWRN*WWNGWGAY  PLCK +A +RLIVEAML
Subject   2436  WNYKGGNHTAQILHVLRKNRVEHSFGDGNTTS*LGQERI**E*KVCSL*LLPWSHR*ERA*T*GWCQESSNKGRDGC*YCLF*SQSAQTDYG*RKAELQSWRN*WWNGWGAY**PLCKCYA*MRLIVEAML  2828

Range 6: 2435 to 2620 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
134.9 bits(288) 0.0 57/62(92%) 0/62(0%) Minus/Minus
Query       10  VQARSHL*LQGRSQRLQTFHSH*ILSWPN*LVVFPSPNGCSTQFSRSTCKICAVWSPLL*FQ  195
                VQARSHL*LQGRSQRLQTFHSH*ILSWPN*LVVFPSPN CST+F RSTCKICAVW P L*FQ
Subject   2435  VQARSHL*LQGRSQRLQTFHSH*ILSWPN*LVVFPSPNECSTRFLRSTCKICAVWLPPL*FQ  2620

Range 7: 2663 to 2830 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
107.4 bits(228) 0.0 51/56(91%) 0/56(0%) Minus/Minus
Query      238  RSIASTISLIRA*RLQRGC**APQPFHH*FLQDWSSAFLQP*SV*AL*LQKRQY*R  405
                RSIASTI+LI A* LQRG **APQPFHH*FLQDWSSAFLQP*SV*AL*LQKRQY*+
Subject   2663  RSIASTINLIHA*HLQRGY**APQPFHH*FLQDWSSAFLQP*SV*AL*LQKRQY*Q  2830

Rupestris stem pitting associated virus isolate BL1 28 kDa coat protein gene, complete cds

Sequence ID: DQ364979.1 Length: 867 Number of Matches: 7

Range 1: 455 to 847 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
314.9 bits(681) 0.0 126/131(96%) 0/131(0%) Minus/Minus
Query       12  GALLPLSALFVRDVCKGVVDKRPSRSTTNFSKIGAPLSFSHSLSEHFDFKRGNISDHLCFCWSSLDTTLRFKRALICDSKEEVKGCKLFILIKSFLGPISWWYSRLQMDVPHNFRVVHAKSAQCGHLSYNS  404
                GALLPLSALFVR++CKGVVDKRPSRSTTNFSKIGAPLSFSHSLSEHFDFKRGNISDHLCFCWSS DT LRFKRALICDSKEEVKGCKLFILIKSFLGPISWWYSRLQMDVPHNF VVHAKSAQCGHLSYNS
Subject    455  GALLPLSALFVRNICKGVVDKRPSRSTTNFSKIGAPLSFSHSLSEHFDFKRGNISDHLCFCWSSFDTNLRFKRALICDSKEEVKGCKLFILIKSFLGPISWWYSRLQMDVPHNFCVVHAKSAQCGHLSYNS  847

Range 2: 455 to 847 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
309.0 bits(668) 0.0 130/131(99%) 0/131(0%) Plus/Plus
Query       12  GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE*G**WKQCS  404
                GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPK GVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE*G**WKQCS
Subject    455  GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKVGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE*G**WKQCS  847

Range 3: 454 to 846 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
306.2 bits(662) 0.0 127/131(97%) 0/131(0%) Plus/Plus
Query       11  WNYKRGDHTAQILHVLRENCVEHPFGDGNTTS*LGQERI**E*KVCSL*LLPWSHR*ERA*T*GWCQESSNKSRDGR*YCLF*SQSAQTDYG*RKAELQSWRN*WWNGWGAYQQPLCKRHARIRLIVEAML  403
                WNYKRGDHTAQILHVLR+NCVEHPFGDGNTTS*LGQERI**E*KVCSL*LLPWSHR*ERA*T*GWCQ+SSNKSRDGR*YCLF*SQSAQTDYG*RKAELQSWRN*WWNGWGAYQQPLCK +ARIRLIVEAML
Subject    454  WNYKRGDHTAQILHVLRKNCVEHPFGDGNTTS*LGQERI**E*KVCSL*LLPWSHR*ERA*T*GWCQKSSNKSRDGR*YCLF*SQSAQTDYG*RKAELQSWRN*WWNGWGAYQQPLCKCYARIRLIVEAML  846

Range 4: 454 to 846 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
301.7 bits(652) 0.0 130/131(99%) 0/131(0%) Minus/Minus
Query       11  EHCFHYQPYSCVTFAKGLLISAPAVPPLISPRLELRFPSAIVCLSTLTSKEAILATISAFVGALLTPPLGSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSKWMFHTIFA*YMQNLRSVVTSLIIP  403
                EHCFHYQPYSCVTFAKGLLISAPAVPPLISPRLELRFPSAIVCLSTLTSKEAILATISAFVGALLTP LGSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSKWMFHTIFA*YMQNLRSVVTSLIIP
Subject    454  EHCFHYQPYSCVTFAKGLLISAPAVPPLISPRLELRFPSAIVCLSTLTSKEAILATISAFVGALLTPTLGSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSKWMFHTIFA*YMQNLRSVVTSLIIP  846

Range 5: 450 to 848 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
301.2 bits(651) 0.0 127/133(95%) 0/133(0%) Plus/Plus
Query        7  ILEL*ER*PHCADFACTTRKLCGTSIWRREYHQLIGPRKDLMRMKSLQPLTSSLESQMRARLNLRVVSRELQQKQRWSLILPLLKSKCSDRLWLKESGAPILEKLVVERLGRLSTTPLQTSRTNKADSGSNAP  405
                +LEL*ER*PHCADFACTT+KLCGTSIWRREYHQLIGPRKDLMRMKSLQPLTSSLESQMRARLNLR+VS+ELQQKQRWSLILPLLKSKCSDRLWLKESGAPILEKLVVERLGRLSTTPLQ  RTNKADSGSNAP
Subject    450  LLEL*ER*PHCADFACTTQKLCGTSIWRREYHQLIGPRKDLMRMKSLQPLTSSLESQMRARLNLRLVSKELQQKQRWSLILPLLKSKCSDRLWLKESGAPILEKLVVERLGRLSTTPLQMLRTNKADSGSNAP  848

Range 6: 453 to 638 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
146.3 bits(313) 0.0 61/62(98%) 0/62(0%) Minus/Minus
Query       10  VQARSHL*LQGRSQRLQTFHSH*ILSWPN*LVVFPSPNGCSTQFSRSTCKICAVWSPLL*FQ  195
                VQARSHL*LQGRSQRLQTFHSH*ILSWPN*LVVFPSPNGCSTQF RSTCKICAVWSPLL*FQ
Subject    453  VQARSHL*LQGRSQRLQTFHSH*ILSWPN*LVVFPSPNGCSTQFLRSTCKICAVWSPLL*FQ  638

Range 7: 681 to 848 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
117.9 bits(251) 0.0 55/56(98%) 0/56(0%) Minus/Minus
Query      238  RSIASTISLIRA*RLQRGC**APQPFHH*FLQDWSSAFLQP*SV*AL*LQKRQY*R  405
                RSIASTISLIRA* LQRGC**APQPFHH*FLQDWSSAFLQP*SV*AL*LQKRQY*R
Subject    681  RSIASTISLIRA*HLQRGC**APQPFHH*FLQDWSSAFLQP*SV*AL*LQKRQY*R  848

Rupestris stem pitting associated virus isolate PGD2 28 kDa coat protein gene, complete cds

Sequence ID: DQ364984.1 Length: 867 Number of Matches: 7

Range 1: 455 to 847 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
313.1 bits(677) 0.0 131/131(100%) 0/131(0%) Plus/Plus
Query       12  GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE*G**WKQCS  404
                GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE*G**WKQCS
Subject    455  GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE*G**WKQCS  847

Range 2: 455 to 847 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
312.2 bits(675) 0.0 123/131(94%) 0/131(0%) Minus/Minus
Query       12  GALLPLSALFVRDVCKGVVDKRPSRSTTNFSKIGAPLSFSHSLSEHFDFKRGNISDHLCFCWSSLDTTLRFKRALICDSKEEVKGCKLFILIKSFLGPISWWYSRLQMDVPHNFRVVHAKSAQCGHLSYNS  404
                GALLPLS LF+RD+CKGVVDKRPSRSTTNFSKIGAPLSFSHSLSEHFDFKRGNISDHLCFCWSSLDTTLRFKRALICDSKEEVKGCKLFILIKSFLGPISWWYSRLQMD+PHNF +VHAKSAQCG+L YNS
Subject    455  GALLPLSTLFMRDICKGVVDKRPSRSTTNFSKIGAPLSFSHSLSEHFDFKRGNISDHLCFCWSSLDTTLRFKRALICDSKEEVKGCKLFILIKSFLGPISWWYSRLQMDIPHNFCIVHAKSAQCGYLPYNS  847

Range 3: 454 to 846 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
301.7 bits(652) 0.0 129/131(98%) 0/131(0%) Minus/Minus
Query       11  EHCFHYQPYSCVTFAKGLLISAPAVPPLISPRLELRFPSAIVCLSTLTSKEAILATISAFVGALLTPPLGSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSKWMFHTIFA*YMQNLRSVVTSLIIP  403
                EHCFHYQPYSCVTFAKGLLISAPAVPPLISPRLELRFPSAIVCLSTLTSKEAILATISAFVGALLTPP GSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSKW+FHTIFA*YMQNLRSVVTSLIIP
Subject    454  EHCFHYQPYSCVTFAKGLLISAPAVPPLISPRLELRFPSAIVCLSTLTSKEAILATISAFVGALLTPPFGSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSKWIFHTIFA*YMQNLRSVVTSLIIP  846

Range 4: 454 to 846 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
292.5 bits(632) 0.0 123/131(94%) 0/131(0%) Plus/Plus
Query       11  WNYKRGDHTAQILHVLRENCVEHPFGDGNTTS*LGQERI**E*KVCSL*LLPWSHR*ERA*T*GWCQESSNKSRDGR*YCLF*SQSAQTDYG*RKAELQSWRN*WWNGWGAYQQPLCKRHARIRLIVEAML  403
                WNYK G+HTAQILHVL +NCVE+PFGDGNTTS*LGQERI**E*KVCSL*LLPWSHR*ERA*T GWCQESSNKSRDGR*YCLF*SQSAQTDYG*RKAELQSWRN*WWNGWGAYQQPLCK HA IRLIVEAML
Subject    454  WNYKGGNHTAQILHVLCKNCVEYPFGDGNTTS*LGQERI**E*KVCSL*LLPWSHR*ERA*TEGWCQESSNKSRDGR*YCLF*SQSAQTDYG*RKAELQSWRN*WWNGWGAYQQPLCKCHA*IRLIVEAML  846

Range 5: 450 to 848 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
290.7 bits(628) 0.0 124/133(93%) 0/133(0%) Plus/Plus
Query        7  ILEL*ER*PHCADFACTTRKLCGTSIWRREYHQLIGPRKDLMRMKSLQPLTSSLESQMRARLNLRVVSRELQQKQRWSLILPLLKSKCSDRLWLKESGAPILEKLVVERLGRLSTTPLQTSRTNKADSGSNAP  405
                +LEL* R*PHCADFACT +KLCG SIWRREYHQLIGPRKDLMRMKSLQPLTSSLESQMRARLN RVVSRELQQKQRWSLILPLLKSKCSDRLWLKESGAPILEKLVVERLGRLSTTPLQ SR NK DSGSNAP
Subject    450  LLEL*GR*PHCADFACTMQKLCGISIWRREYHQLIGPRKDLMRMKSLQPLTSSLESQMRARLNRRVVSRELQQKQRWSLILPLLKSKCSDRLWLKESGAPILEKLVVERLGRLSTTPLQMSRMNKVDSGSNAP  848

Range 6: 453 to 638 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
133.0 bits(284) 0.0 57/62(92%) 0/62(0%) Minus/Minus
Query       10  VQARSHL*LQGRSQRLQTFHSH*ILSWPN*LVVFPSPNGCSTQFSRSTCKICAVWSPLL*FQ  195
                VQARSHL*LQGRSQRLQTFHSH*ILSWPN*LVVFPSPNG STQF  STCKICAVW P L*FQ
Subject    453  VQARSHL*LQGRSQRLQTFHSH*ILSWPN*LVVFPSPNGYSTQFLHSTCKICAVWLPPL*FQ  638

Range 7: 681 to 848 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
114.2 bits(243) 0.0 53/56(95%) 0/56(0%) Minus/Minus
Query      238  RSIASTISLIRA*RLQRGC**APQPFHH*FLQDWSSAFLQP*SV*AL*LQKRQY*R  405
                RSIASTI+LI A* LQRGC**APQPFHH*FLQDWSSAFLQP*SV*AL*LQKRQY*R
Subject    681  RSIASTINLIHA*HLQRGC**APQPFHH*FLQDWSSAFLQP*SV*AL*LQKRQY*R  848

Rupestris stem pitting associated virus isolate VER84 SH 28 kDa coat protein gene, complete cds

Sequence ID: DQ364992.1 Length: 867 Number of Matches: 7

Range 1: 455 to 847 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
313.1 bits(677) 0.0 131/131(100%) 0/131(0%) Plus/Plus
Query       12  GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE*G**WKQCS  404
                GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE*G**WKQCS
Subject    455  GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE*G**WKQCS  847

Range 2: 454 to 846 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
300.3 bits(649) 0.0 128/131(98%) 0/131(0%) Minus/Minus
Query       11  EHCFHYQPYSCVTFAKGLLISAPAVPPLISPRLELRFPSAIVCLSTLTSKEAILATISAFVGALLTPPLGSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSKWMFHTIFA*YMQNLRSVVTSLIIP  403
                EHCFHYQP+SCVTFAKGLLISAPAVPPLISPRLELRFPSAIVCLSTLTSKEAILATISAFVGALLTPPLGSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVS+WMFHTIFA*YMQNLR+VVTSLIIP
Subject    454  EHCFHYQPHSCVTFAKGLLISAPAVPPLISPRLELRFPSAIVCLSTLTSKEAILATISAFVGALLTPPLGSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRWMFHTIFA*YMQNLRNVVTSLIIP  846

Range 3: 458 to 847 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
294.8 bits(637) 0.0 116/130(89%) 0/130(0%) Minus/Minus
Query       15  GALLPLSALFVRDVCKGVVDKRPSRSTTNFSKIGAPLSFSHSLSEHFDFKRGNISDHLCFCWSSLDTTLRFKRALICDSKEEVKGCKLFILIKSFLGPISWWYSRLQMDVPHNFRVVHAKSAQCGHLSYN  404
                GALLPLS  F+R++CKGVVDKRPSRSTTNFSKIGAPLSFSHSLSEHFDFKRGNISDHLCFCWSSLDTTLRFKRALICDSKEEVKGCKLFILIKSFLGP+SWWY RLQMDVPH+F +VHAKS  CG+L YN
Subject    458  GALLPLSTSFMRNICKGVVDKRPSRSTTNFSKIGAPLSFSHSLSEHFDFKRGNISDHLCFCWSSLDTTLRFKRALICDSKEEVKGCKLFILIKSFLGPVSWWYPRLQMDVPHDFCIVHAKST*CGYLPYN  847

Range 4: 453 to 848 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
272.3 bits(588) 0.0 118/132(89%) 0/132(0%) Plus/Plus
Query       10  LEL*ER*PHCADFACTTRKLCGTSIWRREYHQLIGPRKDLMRMKSLQPLTSSLESQMRARLNLRVVSRELQQKQRWSLILPLLKSKCSDRLWLKESGAPILEKLVVERLGRLSTTPLQTSRTNKADSGSNAP  405
                L L* R*PH  DFACT +K CGTSIWRR YHQL GPRKDLMRMKSLQPLTSSLESQMRARLNLRVVSRELQQKQRWSLILPLLKSKCSDRLWLKESGAPILEKLVVERLGRLSTTPLQ  R N+ DSGSNAP
Subject    453  LGL*GR*PHYVDFACTMQKSCGTSIWRRGYHQLTGPRKDLMRMKSLQPLTSSLESQMRARLNLRVVSRELQQKQRWSLILPLLKSKCSDRLWLKESGAPILEKLVVERLGRLSTTPLQMLRMNEVDSGSNAP  848

Range 5: 454 to 846 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
271.0 bits(585) 0.0 116/131(89%) 0/131(0%) Plus/Plus
Query       11  WNYKRGDHTAQILHVLRENCVEHPFGDGNTTS*LGQERI**E*KVCSL*LLPWSHR*ERA*T*GWCQESSNKSRDGR*YCLF*SQSAQTDYG*RKAELQSWRN*WWNGWGAYQQPLCKRHARIRLIVEAML  403
                W+YK G+H   ILHVL +N VEHP GDG+TTS*LGQERI**E*KVCSL*LLPWSHR*ERA*T*GWCQESSNKSRDGR*YCLF*SQSAQTDYG*RKAELQSWRN*WWNGWGAYQQPLCK +A +RLIVEAML
Subject    454  WDYKGGNHIT*ILHVLCKNRVEHPSGDGDTTS*LGQERI**E*KVCSL*LLPWSHR*ERA*T*GWCQESSNKSRDGR*YCLF*SQSAQTDYG*RKAELQSWRN*WWNGWGAYQQPLCKCYA*MRLIVEAML  846

Range 6: 453 to 638 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
116.1 bits(247) 0.0 50/62(81%) 0/62(0%) Minus/Minus
Query       10  VQARSHL*LQGRSQRLQTFHSH*ILSWPN*LVVFPSPNGCSTQFSRSTCKICAVWSPLL*FQ  195
                VQARSHL*LQGRSQRLQTFHSH*ILSWP+*LVV PSP+GCST+F  STCKI  +W P L* Q
Subject    453  VQARSHL*LQGRSQRLQTFHSH*ILSWPS*LVVSPSPDGCSTRFLHSTCKIYVMWLPPL*SQ  638

Range 7: 681 to 848 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
114.2 bits(243) 0.0 53/56(95%) 0/56(0%) Minus/Minus
Query      238  RSIASTISLIRA*RLQRGC**APQPFHH*FLQDWSSAFLQP*SV*AL*LQKRQY*R  405
                RSIASTI+LI A* LQRGC**APQPFHH*FLQDWSSAFLQP*SV*AL*LQKRQY*R
Subject    681  RSIASTINLIHA*HLQRGC**APQPFHH*FLQDWSSAFLQP*SV*AL*LQKRQY*R  848

Rupestris stem pitting associated virus isolate CF6 28 kDa coat protein gene, complete cds

Sequence ID: DQ364994.1 Length: 867 Number of Matches: 7

Range 1: 455 to 847 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
313.1 bits(677) 0.0 131/131(100%) 0/131(0%) Plus/Plus
Query       12  GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE*G**WKQCS  404
                GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE*G**WKQCS
Subject    455  GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE*G**WKQCS  847

Range 2: 454 to 846 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
300.3 bits(649) 0.0 128/131(98%) 0/131(0%) Minus/Minus
Query       11  EHCFHYQPYSCVTFAKGLLISAPAVPPLISPRLELRFPSAIVCLSTLTSKEAILATISAFVGALLTPPLGSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSKWMFHTIFA*YMQNLRSVVTSLIIP  403
                EHCFHYQP+SCVTFAKGLLISAPAVPPLISPRLELRFPSAIVCLSTLTSKEAILATISAFVGALLTPPLGSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVS+WMFHTIFA*YMQNLR+VVTSLIIP
Subject    454  EHCFHYQPHSCVTFAKGLLISAPAVPPLISPRLELRFPSAIVCLSTLTSKEAILATISAFVGALLTPPLGSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRWMFHTIFA*YMQNLRNVVTSLIIP  846

Range 3: 458 to 847 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
294.8 bits(637) 0.0 116/130(89%) 0/130(0%) Minus/Minus
Query       15  GALLPLSALFVRDVCKGVVDKRPSRSTTNFSKIGAPLSFSHSLSEHFDFKRGNISDHLCFCWSSLDTTLRFKRALICDSKEEVKGCKLFILIKSFLGPISWWYSRLQMDVPHNFRVVHAKSAQCGHLSYN  404
                GALLPLS  F+R++CKGVVDKRPSRSTTNFSKIGAPLSFSHSLSEHFDFKRGNISDHLCFCWSSLDTTLRFKRALICDSKEEVKGCKLFILIKSFLGP+SWWY RLQMDVPH+F +VHAKS  CG+L YN
Subject    458  GALLPLSTSFMRNICKGVVDKRPSRSTTNFSKIGAPLSFSHSLSEHFDFKRGNISDHLCFCWSSLDTTLRFKRALICDSKEEVKGCKLFILIKSFLGPVSWWYPRLQMDVPHDFCIVHAKST*CGYLPYN  847

Range 4: 453 to 848 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
272.3 bits(588) 0.0 118/132(89%) 0/132(0%) Plus/Plus
Query       10  LEL*ER*PHCADFACTTRKLCGTSIWRREYHQLIGPRKDLMRMKSLQPLTSSLESQMRARLNLRVVSRELQQKQRWSLILPLLKSKCSDRLWLKESGAPILEKLVVERLGRLSTTPLQTSRTNKADSGSNAP  405
                L L* R*PH  DFACT +K CGTSIWRR YHQL GPRKDLMRMKSLQPLTSSLESQMRARLNLRVVSRELQQKQRWSLILPLLKSKCSDRLWLKESGAPILEKLVVERLGRLSTTPLQ  R N+ DSGSNAP
Subject    453  LGL*GR*PHYVDFACTMQKSCGTSIWRRGYHQLTGPRKDLMRMKSLQPLTSSLESQMRARLNLRVVSRELQQKQRWSLILPLLKSKCSDRLWLKESGAPILEKLVVERLGRLSTTPLQMLRMNEVDSGSNAP  848

Range 5: 454 to 846 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
271.0 bits(585) 0.0 116/131(89%) 0/131(0%) Plus/Plus
Query       11  WNYKRGDHTAQILHVLRENCVEHPFGDGNTTS*LGQERI**E*KVCSL*LLPWSHR*ERA*T*GWCQESSNKSRDGR*YCLF*SQSAQTDYG*RKAELQSWRN*WWNGWGAYQQPLCKRHARIRLIVEAML  403
                W+YK G+H   ILHVL +N VEHP GDG+TTS*LGQERI**E*KVCSL*LLPWSHR*ERA*T*GWCQESSNKSRDGR*YCLF*SQSAQTDYG*RKAELQSWRN*WWNGWGAYQQPLCK +A +RLIVEAML
Subject    454  WDYKGGNHIT*ILHVLCKNRVEHPSGDGDTTS*LGQERI**E*KVCSL*LLPWSHR*ERA*T*GWCQESSNKSRDGR*YCLF*SQSAQTDYG*RKAELQSWRN*WWNGWGAYQQPLCKCYA*MRLIVEAML  846

Range 6: 453 to 638 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
116.1 bits(247) 0.0 50/62(81%) 0/62(0%) Minus/Minus
Query       10  VQARSHL*LQGRSQRLQTFHSH*ILSWPN*LVVFPSPNGCSTQFSRSTCKICAVWSPLL*FQ  195
                VQARSHL*LQGRSQRLQTFHSH*ILSWP+*LVV PSP+GCST+F  STCKI  +W P L* Q
Subject    453  VQARSHL*LQGRSQRLQTFHSH*ILSWPS*LVVSPSPDGCSTRFLHSTCKIYVMWLPPL*SQ  638

Range 7: 681 to 848 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
114.2 bits(243) 0.0 53/56(95%) 0/56(0%) Minus/Minus
Query      238  RSIASTISLIRA*RLQRGC**APQPFHH*FLQDWSSAFLQP*SV*AL*LQKRQY*R  405
                RSIASTI+LI A* LQRGC**APQPFHH*FLQDWSSAFLQP*SV*AL*LQKRQY*R
Subject    681  RSIASTINLIHA*HLQRGC**APQPFHH*FLQDWSSAFLQP*SV*AL*LQKRQY*R  848

Nucleotide Sequence (184 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 33 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
19
38
57
76
95
114
133
152
171
184

Descriptions

Alignments

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 7

Range 1: 6586 to 6756 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
125.2 bits(267) 0.0 54/57(95%) 0/57(0%) Minus/Plus
Query       13  LVKALSTFEFVGVYSVLRFPVVVHSVPGSSKSSLIRELITEDESFTAFTAGVPNTPN  183
                LVKALSTFEFVGVYSVLRFPVVVHSVPGS KSSLIRELITEDESF AFTAGVP+TPN
Subject   6586  LVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGVPDTPN  6756

Range 2: 6586 to 6756 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.9 bits(216) 0.0 43/57(75%) 0/57(0%) Plus/Minus
Query       13  VGCVWNSGCEGCETLVLSDELSYQTTFTATRNTMNDNWKSEHTIDTHKLKRRQSFN*  183
                V  V N+G E  ETLV S+ELSYQTTFT TRN MN+NWKSEH I+THKLKRRQSFN*
Subject   6586  VWSVGNAGRESYETLVFSNELSYQTTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*  6756

Range 3: 6585 to 6755 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
93.6 bits(198) 0.0 44/57(77%) 0/57(0%) Minus/Plus
Query       14  LS*SFVYV*VCGCL*CAQISSCRS*CSW*Q*K*SDKRAHH*GREFHSLHSRSSKHTQ  184
                LS*SFVYV*VCGCL* AQISSC S* SW* *K* DKRAH+* REFHS H R S+H++
Subject   6585  LS*SFVYV*VCGCL*RAQISSCCS*RSW*W*K*FDKRAHY*RREFHSFHGRRSRHSK  6755

Range 4: 6587 to 6718 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.8 bits(170) 0.0 37/44(84%) 0/44(0%) Plus/Minus
Query       51  NSRPQ**ALLSDYFYCYQEHYERQLEI*AHYRHPQTQT*TKL*L  182
                NSR Q**ALLS+YFY YQE YE+QLEI*A Y+HPQTQT*TKL*L
Subject   6587  NSRLQ**ALLSNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*L  6718

Range 5: 6587 to 6658 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.1 bits(103) 0.0 21/24(88%) 0/24(0%) Minus/Plus
Query      111  *LKLCLRLSLWVSIVCSDFQLSFI  182
                *LKLCLRLSLWV I CSDFQL FI
Subject   6587  *LKLCLRLSLWVFIACSDFQLLFI  6658

Range 6: 6692 to 6757 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.8 bits(50) 0.0 13/22(59%) 0/22(0%) Minus/Plus
Query       12  ESSSLRTRVSQPSQPEFQTHPT  77
                ESS L+TRVS  S+P F T  T
Subject   6692  ESSLLKTRVS*LSRPAFPTLQT  6757

Range 7: 6684 to 6752 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
44.9 bits(92) 0.0 20/23(87%) 0/23(0%) Plus/Minus
Query       17  GVFGTPAVKAVKLSSSVMSSLIR  85
                GV GTPAVKA+KLSSSVMSSLI+
Subject   6684  GVSGTPAVKAMKLSSSVMSSLIK  6752

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OB1

Sequence ID: AB277783.1 Length: 2876 Number of Matches: 6

Range 1: 842 to 1012 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
124.3 bits(265) 0.0 52/57(91%) 0/57(0%) Minus/Plus
Query       13  LVKALSTFEFVGVYSVLRFPVVVHSVPGSSKSSLIRELITEDESFTAFTAGVPNTPN  183
                LVKALSTFEFVG+YSVLRFPVVVHSVPGS KSSLIREL+TEDESF AFTAGVP+TPN
Subject    842  LVKALSTFEFVGIYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPN  1012

Range 2: 842 to 1012 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.7 bits(209) 0.0 41/57(72%) 0/57(0%) Plus/Minus
Query       13  VGCVWNSGCEGCETLVLSDELSYQTTFTATRNTMNDNWKSEHTIDTHKLKRRQSFN*  183
                VG V N+G +G ETLVLSD+ SY T FT TRN +N+NWKSEH I+THKLKRRQSFN*
Subject    842  VGSVGNAGRKGYETLVLSDKFSY*TAFTTTRNAVNNNWKSEHAINTHKLKRRQSFN*  1012

Range 3: 841 to 1011 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.2 bits(173) 0.0 41/57(72%) 0/57(0%) Minus/Plus
Query       14  LS*SFVYV*VCGCL*CAQISSCRS*CSW*Q*K*SDKRAHH*GREFHSLHSRSSKHTQ  184
                LS*SFVYV*VCG L* AQISSC S  SW* *K  +KR  H*GREFHSL+ R S+H+Q
Subject    841  LS*SFVYV*VCGYL*RAQISSCCSQRSW*W*KQFNKRTCH*GREFHSLYGRRSRHSQ  1011

Range 4: 843 to 1010 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.9 bits(144) 0.0 40/56(71%) 0/56(0%) Plus/Minus
Query       15  WVCXXXXXXXXXNSRPQ**ALLSDYFYCYQEHYERQLEI*AHYRHPQTQT*TKL*L  182
                W C E R *RL*NSRPQ*  LL + FY YQE  E+QLEI*A Y++PQTQT*TKL*L
Subject    843  WECRERRP*RL*NSRPQ*QVLLLNCFYHYQERCEQQLEI*ARYKYPQTQT*TKL*L  1010

Range 5: 843 to 911 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.3 bits(99) 0.0 20/23(87%) 0/23(0%) Minus/Plus
Query      114  *LKLCLRLSLWVSIVCSDFQLSF  182
                *LKLCLRLSLWV I CSDFQL F
Subject    843  *LKLCLRLSLWVFIACSDFQLLF  911

Range 6: 948 to 1013 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.3 bits(62) 0.0 14/22(64%) 0/22(0%) Minus/Plus
Query       12  ESSSLRTRVSQPSQPEFQTHPT  77
                E+ SLRTRVS P +P F T PT
Subject    948  ENLSLRTRVS*PLRPAFPTLPT  1013

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 6

Range 1: 6586 to 6756 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.4 bits(263) 0.0 52/57(91%) 0/57(0%) Minus/Plus
Query       13  LVKALSTFEFVGVYSVLRFPVVVHSVPGSSKSSLIRELITEDESFTAFTAGVPNTPN  183
                LVKALSTFEFVGVYSVLRFPVVVHSVPGS KSSLIREL+TEDE+F AFTAGVP+TPN
Subject   6586  LVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELVTEDENFIAFTAGVPDTPN  6756

Range 2: 6586 to 6756 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
104.2 bits(221) 0.0 43/57(75%) 0/57(0%) Plus/Minus
Query       13  VGCVWNSGCEGCETLVLSDELSYQTTFTATRNTMNDNWKSEHTIDTHKLKRRQSFN*  183
                VGCV N+G +G E LVLSD+ SY TTFT TRN MN+NWKSEH I+THKLKRRQSFN*
Subject   6586  VGCVRNAGRKGYEILVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*  6756

Range 3: 6585 to 6755 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.9 bits(192) 0.0 45/57(79%) 0/57(0%) Minus/Plus
Query       14  LS*SFVYV*VCGCL*CAQISSCRS*CSW*Q*K*SDKRAHH*GREFHSLHSRSSKHTQ  184
                LS*SFVYV*VCGCL* AQISSC S* SW* *K* +KR  H*GREFHSL+ R S HTQ
Subject   6585  LS*SFVYV*VCGCL*RAQISSCCS*RSW*W*K*FNKRTCH*GREFHSLYGRRS*HTQ  6755

Range 4: 6587 to 6754 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.6 bits(174) 0.0 44/56(79%) 0/56(0%) Plus/Minus
Query       15  WVCXXXXXXXXXNSRPQ**ALLSDYFYCYQEHYERQLEI*AHYRHPQTQT*TKL*L  182
                WVC E R *RL*NSRPQ*  LL +YFY YQE YE+QLEI*A Y+HPQTQT*TKL*L
Subject   6587  WVCQERRP*RL*NSRPQ*QVLLLNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*L  6754

Range 5: 6587 to 6658 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.1 bits(103) 0.0 21/24(88%) 0/24(0%) Minus/Plus
Query      111  *LKLCLRLSLWVSIVCSDFQLSFI  182
                *LKLCLRLSLWV I CSDFQL FI
Subject   6587  *LKLCLRLSLWVFIACSDFQLLFI  6658

Range 6: 6692 to 6757 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.4 bits(71) 0.0 14/22(64%) 0/22(0%) Minus/Plus
Query       12  ESSSLRTRVSQPSQPEFQTHPT  77
                E+ SLRTR+S P +P F THPT
Subject   6692  ENLSLRTRIS*PLRPAFLTHPT  6757

Rupestris stem pitting associated virus strain SG1, complete genome

Sequence ID: AY881626.1 Length: 8742 Number of Matches: 2

Range 1: 6586 to 6756 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
117.9 bits(251) 0.0 48/57(84%) 0/57(0%) Minus/Plus
Query       13  LVKALSTFEFVGVYSVLRFPVVVHSVPGSSKSSLIRELITEDESFTAFTAGVPNTPN  183
                LVKALSTFEF+GV+SVL+FPVV+HSVPGS KSSLIRELI+EDESF AFTAGVP++PN
Subject   6586  LVKALSTFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPN  6756

Range 2: 6589 to 6756 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
65.7 bits(137) 0.0 29/56(52%) 0/56(0%) Plus/Minus
Query       13  VGCVWNSGCEGCETLVLSDELSYQTTFTATRNTMNDNWKSEHTIDTHKLKRRQSFN  180
                V  +WN+ CE  ETLVL D L Y TT T  R TM ++WK +HT +T+KL+  Q FN
Subject   6589  VRTIWNTCCESHETLVL*D*LPY*TTLTTARYTMYNDWKFKHTENTYKLEG*QCFN  6756

Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome

Sequence ID: JX559646.1 Length: 8726 Number of Matches: 2

Range 1: 6586 to 6756 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
117.9 bits(251) 0.0 48/57(84%) 0/57(0%) Minus/Plus
Query       13  LVKALSTFEFVGVYSVLRFPVVVHSVPGSSKSSLIRELITEDESFTAFTAGVPNTPN  183
                LVKALSTFEF+GV+SVL+FPVV+HSVPGS KSSLIRELI+EDESF AFTAGVP++PN
Subject   6586  LVKALSTFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPN  6756

Range 2: 6589 to 6756 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.8 bits(133) 0.0 28/56(50%) 0/56(0%) Plus/Minus
Query       13  VGCVWNSGCEGCETLVLSDELSYQTTFTATRNTMNDNWKSEHTIDTHKLKRRQSFN  180
                V  +WN+ CE  ETLVL D L Y TT T  R TM ++WK +HT +T+K +  Q FN
Subject   6589  VRTIWNTCCESHETLVL*D*LPY*TTLTTARYTMYNDWKFKHTENTYKFEG*QCFN  6756

Nucleotide Sequence (348 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 33 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
35
70
105
140
175
210
245
280
315
348

Descriptions

Alignments

Rupestris stem pitting associated virus strain SG1, complete genome

Sequence ID: AY881626.1 Length: 8742 Number of Matches: 6

Range 1: 457 to 759 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
223.2 bits(481) 0.0 93/101(92%) 0/101(0%) Plus/Plus
Query       14  FGLEFVISSSDKSNHVVSKKGIGDSDTLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYKISDGQL  316
                +G EFVISSSDKS+ ++SKKGIGDS TLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYKISD QL
Subject    457  YGSEFVISSSDKSSQIISKKGIGDSSTLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYKISDDQL  759

Range 2: 459 to 749 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
164.2 bits(352) 0.0 88/97(91%) 0/97(0%) Minus/Minus
Query       16  SLILY**AQGLRLSGEPTSTSGGITAVAKSILGFATSKKLMRSLIDQ**ISSCRKRFRAPVEITRGTNLRSVSESPIPFXXXXXXXXXXXLITNSKP  306
                SLILY**AQGLRLSGEPTSTSGGITAVAKSILG ATSKK +RSLIDQ**ISSCRKRF APVEITRGTNLRSV ESP+PFLL  WLDLSLELITNS P
Subject    459  SLILY**AQGLRLSGEPTSTSGGITAVAKSILGLATSKKFIRSLIDQ**ISSCRKRFLAPVEITRGTNLRSVLESPMPFLLMIWLDLSLELITNSDP  749

Range 3: 460 to 729 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
150.9 bits(323) 0.0 56/90(62%) 0/90(0%) Minus/Minus
Query       17  GPRIEAFRRANQHLWRNYCSCQEHTWLCNIQKINEIAD*PVMNLIMQEKIPSTCGNYARNQSPECVRITNTLLADNMVRLVTRAYHKFQT  286
                GPR++AFRR NQH W ++ SCQ+HTWL +IQ+I +IA+*PVMN IMQ+KIPSTCGN+AR+Q PEC  +TN  LA+++   VTR YHKF++
Subject    460  GPRVKAFRRTNQHFWGDHRSCQKHTWLSHIQEIYQIAN*PVMNFIMQKKIPSTCGNHARDQPPECTGVTNAFLANDLA*FVTRTYHKFRS  729

Range 4: 467 to 757 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
133.0 bits(284) 0.0 62/97(64%) 0/97(0%) Plus/Plus
Query       24  NL**ALVTSLTMLSARRVLVILTHSGDWFRA*FPQVLGIFSCMMRFITGQSAISLIFWMLQSQVCSWQLQ*FLQRCWLALLKASILGPINIRSVMAS  314
                NL** LVT+     AR+ LV   HSG W RA*FPQVLGIF CMM+FITGQ AI  I WM  SQVC WQL+*  Q+CWL LLKA  LGPI+ + VM S
Subject    467  NL**VLVTNQAKSLARKALVTPVHSGGWSRA*FPQVLGIFFCMMKFITGQLAI**ISWMWLSQVCFWQLR*SPQKCWLVLLKALTLGPISTKLVMIS  757

Range 5: 456 to 737 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.0 bits(273) 0.0 59/94(63%) 0/94(0%) Plus/Plus
Query       13  VWFGICDKL**QV*PCCQQEGYW*F*HTPEIGSARNFHRCSESFPA**DSLLVNQRSH*FFGCCKAKYALGNCSNSSRGAGWLS*KPQSLGLSI  294
                VW  ICDK **Q+ P   QE +W*  +TPE+G AR+FHRC ESF A**+SLLVN RS  F GC  AKYA GNC +  R AGW S*KP  LGLS+
Subject    456  VWI*ICDKF**QIKPNH*QERHW*LQYTPEVGPARDFHRC*ESFSA**NSLLVN*RSDKFLGCG*AKYAFGNCGDPPRSAGWFS*KP*PLGLSV  737

Range 6: 455 to 751 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
108.7 bits(231) 0.0 64/99(65%) 0/99(0%) Minus/Minus
Query       12  HH*SYIDRPKD*GFXXXXXXXXXXXXXXPRAYLALQHPKN**DR*LTSNESHHAGKDSEHLWKLRAEPISGVCQNHQYPSC*QHG*TCH*SLSQIPNQT  308
                HH*   DRPK *GFQE+QPA L    QLP+AYLA  HP+N  DR*LTSNE HHA KDS HLWK RA P SGV  +HQ  SC*  G  CH*+LSQI   T
Subject    455  HH*FCTDRPKG*GFQENQPALLGGSPQLPKAYLA*PHPRNLSDR*LTSNEFHHAEKDS*HLWKSRAGPTSGVYWSHQCLSC**FGLICH*NLSQIQIHT  751

Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome

Sequence ID: JX559646.1 Length: 8726 Number of Matches: 6

Range 1: 457 to 759 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
223.2 bits(481) 0.0 93/101(92%) 0/101(0%) Plus/Plus
Query       14  FGLEFVISSSDKSNHVVSKKGIGDSDTLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYKISDGQL  316
                +G EFVISSSDKS+ ++SKKGIGDS TLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYKISD QL
Subject    457  YGSEFVISSSDKSSQIISKKGIGDSSTLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYKISDDQL  759

Range 2: 459 to 749 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
164.2 bits(352) 0.0 88/97(91%) 0/97(0%) Minus/Minus
Query       16  SLILY**AQGLRLSGEPTSTSGGITAVAKSILGFATSKKLMRSLIDQ**ISSCRKRFRAPVEITRGTNLRSVSESPIPFXXXXXXXXXXXLITNSKP  306
                SLILY**AQGLRLSGEPTSTSGGITAVAKSILG ATSKK +RSLIDQ**ISSCRKRF APVEITRGTNLRSV ESP+PFLL  WLDLSLELITNS P
Subject    459  SLILY**AQGLRLSGEPTSTSGGITAVAKSILGLATSKKFIRSLIDQ**ISSCRKRFLAPVEITRGTNLRSVLESPMPFLLMIWLDLSLELITNSDP  749

Range 3: 460 to 729 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
150.9 bits(323) 0.0 56/90(62%) 0/90(0%) Minus/Minus
Query       17  GPRIEAFRRANQHLWRNYCSCQEHTWLCNIQKINEIAD*PVMNLIMQEKIPSTCGNYARNQSPECVRITNTLLADNMVRLVTRAYHKFQT  286
                GPR++AFRR NQH W ++ SCQ+HTWL +IQ+I +IA+*PVMN IMQ+KIPSTCGN+AR+Q PEC  +TN  LA+++   VTR YHKF++
Subject    460  GPRVKAFRRTNQHFWGDHRSCQKHTWLSHIQEIYQIAN*PVMNFIMQKKIPSTCGNHARDQPPECAGVTNAFLANDLA*FVTRTYHKFRS  729

Range 4: 456 to 737 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
130.7 bits(279) 0.0 60/94(64%) 0/94(0%) Plus/Plus
Query       13  VWFGICDKL**QV*PCCQQEGYW*F*HTPEIGSARNFHRCSESFPA**DSLLVNQRSH*FFGCCKAKYALGNCSNSSRGAGWLS*KPQSLGLSI  294
                VW  ICDK **Q+ P   QE +W*  HTPE+G AR+FHRC ESF A**+SLLVN RS  F GC  AKYA GNC +  R AGW S*KP  LGLS+
Subject    456  VWI*ICDKF**QIKPNH*QERHW*LQHTPEVGPARDFHRC*ESFSA**NSLLVN*RSDKFLGCG*AKYAFGNCGDPPRSAGWFS*KP*PLGLSV  737

Range 5: 467 to 757 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
130.3 bits(278) 0.0 61/97(63%) 0/97(0%) Plus/Plus
Query       24  NL**ALVTSLTMLSARRVLVILTHSGDWFRA*FPQVLGIFSCMMRFITGQSAISLIFWMLQSQVCSWQLQ*FLQRCWLALLKASILGPINIRSVMAS  314
                NL** LVT+     AR+ LV   HSG W RA*FPQVLGIF CMM+FITGQ AI  I WM  SQVC WQL+*  Q+CWL LLKA  LGPI+ + V  S
Subject    467  NL**VLVTNQAKSLARKALVTPAHSGGWSRA*FPQVLGIFFCMMKFITGQLAI**ISWMWLSQVCFWQLR*SPQKCWLVLLKALTLGPISTKLVTIS  757

Range 6: 455 to 748 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
110.1 bits(234) 0.0 64/98(65%) 0/98(0%) Minus/Minus
Query       12  H*SYIDRPKD*GFXXXXXXXXXXXXXXPRAYLALQHPKN**DR*LTSNESHHAGKDSEHLWKLRAEPISGVCQNHQYPSC*QHG*TCH*SLSQIPNQT  305
                H*   DRPK *GFQE+QPA L    QLP+AYLA  HP+N  DR*LTSNE HHA KDS HLWK RA P SGVC +HQ  SC*  G  CH*+LSQI   T
Subject    455  H*FCTDRPKG*GFQENQPALLGGSPQLPKAYLA*PHPRNLSDR*LTSNEFHHAEKDS*HLWKSRAGPTSGVCWSHQCLSC**FGLICH*NLSQIQIHT  748

Grapevine rupestris stem pitting associated virus isolate GRSPaV WA, complete genome

Sequence ID: KC427107.1 Length: 8742 Number of Matches: 6

Range 1: 457 to 759 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
223.2 bits(481) 0.0 93/101(92%) 0/101(0%) Plus/Plus
Query       14  FGLEFVISSSDKSNHVVSKKGIGDSDTLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYKISDGQL  316
                +G EFVISSSDKS+ ++SKKGIGDS TLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYKISD QL
Subject    457  YGSEFVISSSDKSSQIISKKGIGDSSTLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYKISDDQL  759

Range 2: 459 to 749 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
164.2 bits(352) 0.0 88/97(91%) 0/97(0%) Minus/Minus
Query       16  SLILY**AQGLRLSGEPTSTSGGITAVAKSILGFATSKKLMRSLIDQ**ISSCRKRFRAPVEITRGTNLRSVSESPIPFXXXXXXXXXXXLITNSKP  306
                SLILY**AQGLRLSGEPTSTSGGITAVAKSILG ATSKK +RSLIDQ**ISSCRKRF APVEITRGTNLRSV ESP+PFLL  WLDLSLELITNS P
Subject    459  SLILY**AQGLRLSGEPTSTSGGITAVAKSILGLATSKKFIRSLIDQ**ISSCRKRFLAPVEITRGTNLRSVLESPMPFLLMIWLDLSLELITNSDP  749

Range 3: 460 to 729 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
150.4 bits(322) 0.0 55/90(61%) 0/90(0%) Minus/Minus
Query       17  GPRIEAFRRANQHLWRNYCSCQEHTWLCNIQKINEIAD*PVMNLIMQEKIPSTCGNYARNQSPECVRITNTLLADNMVRLVTRAYHKFQT  286
                GPR++AFRR NQH W ++ SCQ+HTWL +IQ+I +IA+*PVMN IMQ+KIPSTCGN+AR+Q PEC  +TN  LA+++   +TR YHKF++
Subject    460  GPRVKAFRRTNQHFWGDHRSCQKHTWLSHIQEIYQIAN*PVMNFIMQKKIPSTCGNHARDQPPECTGVTNAFLANDLA*FITRTYHKFRS  729

Range 4: 467 to 757 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
127.5 bits(272) 0.0 60/97(62%) 0/97(0%) Plus/Plus
Query       24  NL**ALVTSLTMLSARRVLVILTHSGDWFRA*FPQVLGIFSCMMRFITGQSAISLIFWMLQSQVCSWQLQ*FLQRCWLALLKASILGPINIRSVMAS  314
                NL** LV +     AR+ LV   HSG W RA*FPQVLGIF CMM+FITGQ AI  I WM  SQVC WQL+*  Q+CWL LLKA  LGPI+ + V  S
Subject    467  NL**VLVINQAKSLARKALVTPVHSGGWSRA*FPQVLGIFFCMMKFITGQLAI**ISWMWLSQVCFWQLR*SPQKCWLVLLKALTLGPISTKLVTIS  757

Range 5: 456 to 737 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.9 bits(264) 0.0 58/94(62%) 0/94(0%) Plus/Plus
Query       13  VWFGICDKL**QV*PCCQQEGYW*F*HTPEIGSARNFHRCSESFPA**DSLLVNQRSH*FFGCCKAKYALGNCSNSSRGAGWLS*KPQSLGLSI  294
                VW  ICDK ** + P   QE +W*  +TPE+G AR+FHRC ESF A**+SLLVN RS  F GC  AKYA GNC +  R AGW S*KP  LGLS+
Subject    456  VWI*ICDKF***IKPNH*QERHW*LQYTPEVGPARDFHRC*ESFSA**NSLLVN*RSDKFLGCG*AKYAFGNCGDPPRSAGWFS*KP*PLGLSV  737

Range 6: 455 to 748 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
100.0 bits(212) 0.0 62/98(63%) 0/98(0%) Minus/Minus
Query       12  H*SYIDRPKD*GFXXXXXXXXXXXXXXPRAYLALQHPKN**DR*LTSNESHHAGKDSEHLWKLRAEPISGVCQNHQYPSC*QHG*TCH*SLSQIPNQT  305
                H*   DRPK *GFQE+QPA L    QLP+AYLA  HP+N  DR*LTSNE HHA KDS HLWK RA P SGV  +HQ  SC*  G   H*+LSQI   T
Subject    455  H*FCTDRPKG*GFQENQPALLGGSPQLPKAYLA*PHPRNLSDR*LTSNEFHHAEKDS*HLWKSRAGPTSGVYWSHQCLSC**FGLIYH*NLSQIQIHT  748

Rupestris stem pitting associated virus strain BS, complete genome

Sequence ID: AY881627.1 Length: 8743 Number of Matches: 6

Range 1: 457 to 759 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
222.8 bits(480) 0.0 92/101(91%) 0/101(0%) Plus/Plus
Query       14  FGLEFVISSSDKSNHVVSKKGIGDSDTLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYKISDGQL  316
                +G EFVISSSDKS+ V+SKKGIGDSDTLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQY++S+ QL
Subject    457  YGSEFVISSSDKSSQVISKKGIGDSDTLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYRVSNNQL  759

Range 2: 463 to 729 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
201.3 bits(433) 0.0 77/89(87%) 0/89(0%) Minus/Minus
Query       20  GPRIEAFRRANQHLWRNYCSCQEHTWLCNIQKINEIAD*PVMNLIMQEKIPSTCGNYARNQSPECVRITNTLLADNMVRLVTRAYHKFQ  286
                GPRIEAFRRANQHLWRN+CSCQEHTWLCNIQKINEIAD*PVMNLIMQEKIPSTCGNYARNQ PECVRI NTLLA+++   +TR YHKF+
Subject    463  GPRIEAFRRANQHLWRNHCSCQEHTWLCNIQKINEIAD*PVMNLIMQEKIPSTCGNYARNQPPECVRIANTLLANDLTGFITRTYHKFR  729

Range 3: 456 to 758 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
190.8 bits(410) 0.0 82/101(81%) 0/101(0%) Plus/Plus
Query       13  VWFGICDKL**QV*PCCQQEGYW*F*HTPEIGSARNFHRCSESFPA**DSLLVNQRSH*FFGCCKAKYALGNCSNSSRGAGWLS*KPQSLGLSI*DQ*WPV  315
                VW  ICDK ** +     QEGYW F*HTPE+GSARNFHRCSESFPA**DSLLVNQRSH*FFGCCKAKYALGNCS+SSRGAGWLS*KPQSLGL +  Q* P+
Subject    456  VWV*ICDKF***IQSSH*QEGYWRF*HTPEVGSARNFHRCSESFPA**DSLLVNQRSH*FFGCCKAKYALGNCSDSSRGAGWLS*KPQSLGLPVQSQ*QPI  758

Range 4: 467 to 748 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
182.1 bits(391) 0.0 80/94(85%) 0/94(0%) Plus/Plus
Query       24  NL**ALVTSLTMLSARRVLVILTHSGDWFRA*FPQVLGIFSCMMRFITGQSAISLIFWMLQSQVCSWQLQ*FLQRCWLALLKASILGPINIRSV  305
                NL** LV +     ARRVL ILTHSG WFRA*FPQVLGIFSCMMRFITGQSAISLIFWMLQSQVCSWQLQ*FLQRCWLALLKASILGP +  SV
Subject    467  NL**VLVINPVKSLARRVLAILTHSGGWFRA*FPQVLGIFSCMMRFITGQSAISLIFWMLQSQVCSWQLQ*FLQRCWLALLKASILGPTSTESV  748

Range 5: 459 to 758 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
175.6 bits(377) 0.0 93/100(93%) 0/100(0%) Minus/Minus
Query       16  NWPSLILY**AQGLRLSGEPTSTSGGITAVAKSILGFATSKKLMRSLIDQ**ISSCRKRFRAPVEITRGTNLRSVSESPIPFXXXXXXXXXXXLITNSKP  315
                NW  L LY *AQGLRLSGEPTSTSGGITAVAKSILGFATSKKLMRSLIDQ**ISSCRKRFRAPVEITRGTNLRSVSESPIPFLL T LDLSLELITNS P
Subject    459  NWLLLTLYW*AQGLRLSGEPTSTSGGITAVAKSILGFATSKKLMRSLIDQ**ISSCRKRFRAPVEITRGTNLRSVSESPIPFLLMT*LDLSLELITNSDP  758

Range 6: 452 to 730 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
142.7 bits(305) 0.0 79/93(85%) 0/93(0%) Minus/Minus
Query        9  RPKD*GFXXXXXXXXXXXXXXPRAYLALQHPKN**DR*LTSNESHHAGKDSEHLWKLRAEPISGVCQNHQYPSC*QHG*TCH*SLSQIPNQTH  287
                RPKD*GFQESQPAPLEE LQLPRAYLALQHPKN**DR*LTSNESHHAGKDSEHLWKLRAEP SGVCQN QYPSC*      H*+LSQI   T+
Subject    452  RPKD*GFQESQPAPLEESLQLPRAYLALQHPKN**DR*LTSNESHHAGKDSEHLWKLRAEPTSGVCQNRQYPSC**LDWIYH*NLSQIQTHTY  730

Grapevine rupestris stem pitting associated virus complete genome, genomic RNA, isolate GRSPaV MG

Sequence ID: FR691076.1 Length: 8749 Number of Matches: 6

Range 1: 457 to 759 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
220.9 bits(476) 0.0 92/101(91%) 0/101(0%) Plus/Plus
Query       14  FGLEFVISSSDKSNHVVSKKGIGDSDTLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYKISDGQL  316
                +G EFVISSSDKS+ ++SKKGIGDS TLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYKIS+ QL
Subject    457  YGSEFVISSSDKSSQIISKKGIGDSSTLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYKISNDQL  759

Range 2: 459 to 746 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
159.1 bits(341) 0.0 85/96(89%) 0/96(0%) Minus/Minus
Query       16  LILY**AQGLRLSGEPTSTSGGITAVAKSILGFATSKKLMRSLIDQ**ISSCRKRFRAPVEITRGTNLRSVSESPIPFXXXXXXXXXXXLITNSKP  303
                LILY *AQGLRLSGEPTSTSGGITAVAKSILG ATSKKL++SLIDQ**ISSC+KRF APVEITRGTNLRSV ESP+PFLL  WLDLSLELITNS P
Subject    459  LILYW*AQGLRLSGEPTSTSGGITAVAKSILGLATSKKLIKSLIDQ**ISSCKKRFLAPVEITRGTNLRSVLESPMPFLLMIWLDLSLELITNSDP  746

Range 3: 460 to 729 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
153.7 bits(329) 0.0 59/90(66%) 0/90(0%) Minus/Minus
Query       17  GPRIEAFRRANQHLWRNYCSCQEHTWLCNIQKINEIAD*PVMNLIMQEKIPSTCGNYARNQSPECVRITNTLLADNMVRLVTRAYHKFQT  286
                GPR++A RR NQHLWR++C CQ+HTWL +IQ+I+ IA+*PVMN IMQ+KI STCGN AR+Q  EC RITN  LAD++  LVTR YHKF++
Subject    460  GPRVKALRRTNQHLWRDHCCCQKHTWLSHIQEID*IAN*PVMNFIMQKKISSTCGNNARDQPSECARITNAFLADDLA*LVTRTYHKFRS  729

Range 4: 467 to 766 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
132.1 bits(282) 0.0 63/100(63%) 0/100(0%) Plus/Plus
Query       24  NL**ALVTSLTMLSARRVLVILTHSGDWFRA*FPQVLGIFSCMMRFITGQSAISLIFWMLQSQVCSWQLQ*FLQRCWLALLKASILGPINIRSVMASYKS  323
                NL** LVTS    SAR+ LVIL HS  W RA FPQVL IF CMM+FITGQ AI  I WM  SQVC WQ Q* LQRCWL LL+A  LGP + + V  S  S
Subject    467  NL**VLVTSQAKSSARKALVILAHSEGWSRALFPQVLEIFFCMMKFITGQLAI*SISWMWLSQVCFWQQQ*SLQRCWLVLLRALTLGPTSTKLVTISCSS  766

Range 5: 456 to 737 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
130.3 bits(278) 0.0 61/94(65%) 0/94(0%) Plus/Plus
Query       13  VWFGICDKL**QV*PCCQQEGYW*F*HTPEIGSARNFHRCSESFPA**DSLLVNQRSH*FFGCCKAKYALGNCSNSSRGAGWLS*KPQSLGLSI  294
                VW  ICDK **QV P  QQE +W*F*HTP++G AR FHRC +SF A**+SLLVN R + F GC  AKYA GN S+ SRGAGW S*+P  LGL +
Subject    456  VWI*ICDKF**QVKPNHQQERHW*F*HTPKVGPARYFHRC*KSFFA**NSLLVN*RFNQFLGCG*AKYAFGNSSDPSRGAGWFS*EP*PLGLPV  737

Range 6: 455 to 664 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
96.8 bits(205) 0.0 46/70(66%) 0/70(0%) Minus/Minus
Query       12  RAYLALQHPKN**DR*LTSNESHHAGKDSEHLWKLRAEPISGVCQNHQYPSC*QHG*TCH*SLSQIPNQT  221
                +AYLA  HP+N* +R*LTSNE HHA KD  HLWK RA P  GVC NHQ  SC*  G TCH*+LSQI   T
Subject    455  KAYLA*PHPRN*LNR*LTSNEFHHAKKDF*HLWK*RAGPTFGVC*NHQCLSC**FGLTCH*NLSQIQIHT  664

Nucleotide Sequence (490 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 33 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
49
98
147
196
245
294
343
392
441
490

Descriptions

Alignments

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 8

Range 1: 6859 to 7347 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
394.7 bits(855) 0.0 160/163(98%) 0/163(0%) Minus/Plus
Query        1  DVLFSDPYQNISVPREAHFIKSKTCRFGKNTCKYLLSFGFDVHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*DAFSATCELGQNCYSIDNRLGHWLGAAFPKKVKFA  489
                DVLFSDPYQNISVPREAHFIKSKTCRFGKNTCKYLLSFGFDVHSDRSDEVITGSPFELDVEGVLICFGKEAV+LAAAHNSDFKLPCEVRG TFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*DAFSATCELGQNCYSID+RLGHWLGAAFPKKVKFA
Subject   6859  DVLFSDPYQNISVPREAHFIKSKTCRFGKNTCKYLLSFGFDVHSDRSDEVITGSPFELDVEGVLICFGKEAVNLAAAHNSDFKLPCEVRGTTFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*DAFSATCELGQNCYSIDDRLGHWLGAAFPKKVKFA  7347

Range 2: 6859 to 7347 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
387.3 bits(839) 0.0 162/163(99%) 0/163(0%) Plus/Minus
Query        1  GKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDDQLLPMSCCSNVEPVLIIRGRIS*FQ*GNNIKCSTSYLTRKFEI*IMRSCQINCLLAKAN*HTLNIQLKW*TCNHFIRPVTMHIKTKG*KVLTCIFAKPAGL*LYEVSLPWNTDILIWVRE*HV  489
                GKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDDQLLPMSCCSNVEPVLIIRGRIS*FQ*GNNIKCSTSYLTRKFEI*IMRSCQ+NCLLAKAN*HTLNIQLKW*TCNHFIRPVTMHIKTKG*KVLTCIFAKPAGL*LYEVSLPWNTDILIWVRE*HV
Subject   6859  GKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDDQLLPMSCCSNVEPVLIIRGRIS*FQ*GNNIKCSTSYLTRKFEI*IMRSCQVNCLLAKAN*HTLNIQLKW*TCNHFIRPVTMHIKTKG*KVLTCIFAKPAGL*LYEVSLPWNTDILIWVRE*HV  7347

Range 3: 6858 to 7346 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
369.0 bits(799) 0.0 159/163(98%) 0/163(0%) Plus/Minus
Query        2  ANLTFLGNAAPSQCPSLLSME*QFWPNSQVAEKASHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCTSKPKDRRYLHVFLPNLQVFDFMK*ASLGTLIF*YGSENSTS  490
                ANLTFLGNAAPSQCPSL SME*QFWPNSQVAEKASHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNV PRTSQGSLKSELCAAAK TASLPKQISTPSTSNSNGEPVITSSDLSLCTSKPKDRRYLHVFLPNLQVFDFMK*ASLGTLIF*YGSEN+TS
Subject   6858  ANLTFLGNAAPSQCPSLSSME*QFWPNSQVAEKASHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVVPRTSQGSLKSELCAAAKLTASLPKQISTPSTSNSNGEPVITSSDLSLCTSKPKDRRYLHVFLPNLQVFDFMK*ASLGTLIF*YGSENNTS  7346

Range 4: 6860 to 7345 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
369.0 bits(799) 0.0 157/162(97%) 0/162(0%) Plus/Minus
Query        3  QI*LS*EMQHQANAQAYCQWSNSFGPIRRLLKRHLTA**STSSYVLLQQCRTSAYHQRSDLLISIR*QHQM*HLVPHKEV*NLNYAQLPNQLPPCQSKLAHPQHPTQMVNL*SLHQTCHYAHQNQRIEGTYMYFCQTCRSLTL*SEPPLEH*YFDMGQRIAR  488
                QI*LS*EMQHQANAQAY QWSNSFGPIRRLLKRHLTA**STSSYVLLQQCRTSAYHQRSDLLISIR*QHQM*+LVPHKEV*NLNYAQLP+ LPPCQSKLAHPQHPTQMVNL*SLHQTCHYAHQNQRIEGTYMYFCQTCRSLTL*SEPPLEH*YFDMGQRI R
Subject   6860  QI*LS*EMQHQANAQAYRQWSNSFGPIRRLLKRHLTA**STSSYVLLQQCRTSAYHQRSDLLISIR*QHQM*YLVPHKEV*NLNYAQLPS*LPPCQSKLAHPQHPTQMVNL*SLHQTCHYAHQNQRIEGTYMYFCQTCRSLTL*SEPPLEH*YFDMGQRITR  7345

Range 5: 7103 to 7345 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
189.4 bits(407) 0.0 81/81(100%) 0/81(0%) Minus/Plus
Query        3  SNFLVRYEVLHLMLLPY*NQEIRPLMISTGSTLLQQDIGRS*SSCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNL  245
                SNFLVRYEVLHLMLLPY*NQEIRPLMISTGSTLLQQDIGRS*SSCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNL
Subject   7103  SNFLVRYEVLHLMLLPY*NQEIRPLMISTGSTLLQQDIGRS*SSCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNL  7345

Range 6: 6860 to 7054 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
154.1 bits(330) 0.0 65/65(100%) 0/65(0%) Minus/Plus
Query      294  TCYSLTHIKISVFQGRLTS*SQRPAGLAKIHVSTFYPLVLMCIVTGLMK*LQVHHLSWMLRVC*F  488
                TCYSLTHIKISVFQGRLTS*SQRPAGLAKIHVSTFYPLVLMCIVTGLMK*LQVHHLSWMLRVC*F
Subject   6860  TCYSLTHIKISVFQGRLTS*SQRPAGLAKIHVSTFYPLVLMCIVTGLMK*LQVHHLSWMLRVC*F  7054

Range 7: 6858 to 7277 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
311.7 bits(674) 0.0 137/140(98%) 0/140(0%) Minus/Plus
Query       71  *RAIL*PISKYQCSKGGSLHKVKDLQVWQKYM*VPSILWF*CA**QV**SDYRFTI*VGC*GCANLLWQGGS*FGSCA*FRFQTSL*GTRCYI*CCYLIEIKRSDL***ALVLHCCNKT*EEVDHHAVRCLFSNLRIGPK  490
                *R IL*PISKYQCSKGGSLHKVKDLQVWQKYM*VPSILWF*CA**QV**SDYRFTI*VGC*GCANLLWQGGS* GSCA*FRFQTSL*GTR YI*CCYLIEIKRSDL***ALVLHCCNKT*EEVDHHAVRCLFSNLRIGPK
Subject   6858  *RVIL*PISKYQCSKGGSLHKVKDLQVWQKYM*VPSILWF*CA**QV**SDYRFTI*VGC*GCANLLWQGGS*LGSCA*FRFQTSL*GTRYYI*CCYLIEIKRSDL***ALVLHCCNKT*EEVDHHAVRCLFSNLRIGPK  7277

Range 8: 7317 to 7346 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
27.6 bits(54) 0.0 10/10(100%) 0/10(0%) Minus/Plus
Query        2  CCIS*ESQIC  31
                CCIS*ESQIC
Subject   7317  CCIS*ESQIC  7346

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OB1

Sequence ID: AB277783.1 Length: 2876 Number of Matches: 8

Range 1: 1115 to 1603 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
373.6 bits(809) 0.0 152/163(93%) 0/163(0%) Minus/Plus
Query        1  DVLFSDPYQNISVPREAHFIKSKTCRFGKNTCKYLLSFGFDVHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*DAFSATCELGQNCYSIDNRLGHWLGAAFPKKVKFA  489
                DVLFSDPYQNISVPREAHFIKSKTCRFG+NTCKYLLSFGF++HSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*+AFSATCELGQN + ID+ LGHWL A+FPKKVKFA
Subject   1115  DVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPIDDWLGHWLSASFPKKVKFA  1603

Range 2: 1114 to 1602 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
345.6 bits(748) 0.0 152/163(93%) 0/163(0%) Plus/Minus
Query        2  ANLTFLGNAAPSQCPSLLSME*QFWPNSQVAEKASHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCTSKPKDRRYLHVFLPNLQVFDFMK*ASLGTLIF*YGSENSTS  490
                ANLTFLGN A SQCPS  SM * FWPNSQVAEKA HCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLC  KPKDRRYLHVF PNLQVFDFMK*ASLGTLIF*YGSEN+TS
Subject   1114  ANLTFLGNEALSQCPSQSSMG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLIF*YGSENNTS  1602

Range 3: 1115 to 1603 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
337.9 bits(731) 0.0 147/163(90%) 0/163(0%) Plus/Minus
Query        1  GKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDDQLLPMSCCSNVEPVLIIRGRIS*FQ*GNNIKCSTSYLTRKFEI*IMRSCQINCLLAKAN*HTLNIQLKW*TCNHFIRPVTMHIKTKG*KVLTCIFAKPAGL*LYEVSLPWNTDILIWVRE*HV  489
                GKFDFLRK STKPMPKPIVNGV VLAQFAGC*KGISLHDDQ L MSCCSNVEPVLII GRI *FQ*GNNIKCSTSYLTRKFEI IMRS  INCLLAKAN HTLNIQLKW  CNHFIRPVTM IKTKG KVLTCIFAK AGL*LYEVSLPWNTDILIWVR+*HV
Subject   1115  GKFDFLRK*STKPMPKPIVNGVIVLAQFAGC*KGISLHDDQFLSMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSYLTRKFEIGIMRSR*INCLLAKANQHTLNIQLKWRACNHFIRPVTMQIKTKGQKVLTCIFAKSAGL*LYEVSLPWNTDILIWVRK*HV  1603

Range 4: 1116 to 1601 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
314.9 bits(681) 0.0 138/162(85%) 0/162(0%) Plus/Minus
Query        3  QI*LS*EMQHQANAQAYCQWSNSFGPIRRLLKRHLTA**STSSYVLLQQCRTSAYHQRSDLLISIR*QHQM*HLVPHKEV*NLNYAQLPNQLPPCQSKLAHPQHPTQMVNL*SLHQTCHYAHQNQRIEGTYMYFCQTCRSLTL*SEPPLEH*YFDMGQRIAR  488
                QI*LS*EM+H ANAQA  QW +SFGPIRRLLKRH TA**S S YVLLQQCRTSAYH+RSD LISIR*QHQM*HLVPHKEV*N NYAQ  NQLPPCQSK AHPQHPTQM +L*SLHQTCHYA+ NQR EGTYMYF Q CRSLTL*SEPPLEH*YFDMGQ+I R
Subject   1116  QI*LS*EMKH*ANAQANRQWGDSFGPIRRLLKRHFTA**SISFYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLVPHKEV*NRNYAQPLNQLPPCQSKSAHPQHPTQMASL*SLHQTCHYAN*NQRTEGTYMYFRQICRSLTL*SEPPLEH*YFDMGQKITR  1601

Range 5: 1359 to 1601 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
177.5 bits(381) 0.0 76/81(94%) 0/81(0%) Minus/Plus
Query        3  SNFLVRYEVLHLMLLPY*NQEIRPLMISTGSTLLQQDIGRS*SSCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNL  245
                SNFLVRYEVLHLMLLPY*NQ IRP MISTGSTLLQQDI R+*SSCSEMPFQQPANWAKT+TPLTIGLGIGLVLHFLRKSNL
Subject   1359  SNFLVRYEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIERN*SSCSEMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNL  1601

Range 6: 1116 to 1310 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
136.7 bits(292) 0.0 59/65(91%) 0/65(0%) Minus/Plus
Query      294  TCYSLTHIKISVFQGRLTS*SQRPAGLAKIHVSTFYPLVLMCIVTGLMK*LQVHHLSWMLRVC*F  488
                TCY LTHIKISVFQGRLTS*SQRPA LAKIHVSTF PLVL+CIVTGLMK*LQ  HLSWMLRVC*F
Subject   1116  TCYFLTHIKISVFQGRLTS*SQRPADLAKIHVSTFCPLVLICIVTGLMK*LQARHLSWMLRVC*F  1310

Range 7: 1114 to 1533 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
288.8 bits(624) 0.0 124/140(89%) 0/140(0%) Minus/Plus
Query       71  *RAIL*PISKYQCSKGGSLHKVKDLQVWQKYM*VPSILWF*CA**QV**SDYRFTI*VGC*GCANLLWQGGS*FGSCA*FRFQTSL*GTRCYI*CCYLIEIKRSDL***ALVLHCCNKT*EEVDHHAVRCLFSNLRIGPK  490
                *R I *PISKYQCSKGGSLHKVKDLQ+W+KYM*VPS+LWF* A**QV**SDYR  I*VGC*GCA+LLWQGGS*F  CA*FRFQTSL*GTRCYI*CCYLIEIK SDL **ALVLHCCNKT*+E+DHHAV+CLFSNLRIGPK
Subject   1114  *RVIF*PISKYQCSKGGSLHKVKDLQIWRKYM*VPSVLWF*FA**QV**SDYRLAI*VGC*GCADLLWQGGS*FSGCA*FRFQTSL*GTRCYI*CCYLIEIKGSDLR**ALVLHCCNKT*KEIDHHAVKCLFSNLRIGPK  1533

Range 8: 1573 to 1602 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
22.6 bits(43) 0.0 9/10(90%) 0/10(0%) Minus/Plus
Query        2  CCIS*ESQIC  31
                C IS*ESQIC
Subject   1573  CFIS*ESQIC  1602

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 8

Range 1: 6859 to 7347 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
370.8 bits(803) 0.0 151/163(93%) 0/163(0%) Minus/Plus
Query        1  DVLFSDPYQNISVPREAHFIKSKTCRFGKNTCKYLLSFGFDVHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*DAFSATCELGQNCYSIDNRLGHWLGAAFPKKVKFA  489
                DVLFSDPYQNISVPREAHFIKSKTCRFG+NTCKYLLSFGF++HSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*+AFSATCELGQN + +D+  GHWLGAAF KKVKFA
Subject   6859  DVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPVDDWRGHWLGAAFSKKVKFA  7347

Range 2: 6858 to 7346 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
343.8 bits(744) 0.0 151/163(93%) 0/163(0%) Plus/Minus
Query        2  ANLTFLGNAAPSQCPSLLSME*QFWPNSQVAEKASHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCTSKPKDRRYLHVFLPNLQVFDFMK*ASLGTLIF*YGSENSTS  490
                ANLTFL NAAPSQCP   S  * FWPNSQVAEKA HCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLC  KPKDRRYLHVF PNLQVFDFMK*ASLGTLIF*YGSEN+TS
Subject   6858  ANLTFLENAAPSQCPRQSSTG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLIF*YGSENNTS  7346

Range 3: 6859 to 7347 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
343.3 bits(743) 0.0 148/163(91%) 0/163(0%) Plus/Minus
Query        1  GKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDDQLLPMSCCSNVEPVLIIRGRIS*FQ*GNNIKCSTSYLTRKFEI*IMRSCQINCLLAKAN*HTLNIQLKW*TCNHFIRPVTMHIKTKG*KVLTCIFAKPAGL*LYEVSLPWNTDILIWVRE*HV  489
                GKFDFLRKCSTKPMP PIVNGV VLAQFAGC*KGISLHDDQ L MSCCSNVEPVLII GRI *FQ*GNNIKCSTS+LTRKFEI IMRS  INCLLAKAN*HTLNIQLKW TCNHFIRPVTM IKTKG KVLTCIFAK AGL*LYEVSLPWNTDILIWVR+*HV
Subject   6859  GKFDFLRKCSTKPMPTPIVNGVIVLAQFAGC*KGISLHDDQFLSMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSHLTRKFEIRIMRSR*INCLLAKAN*HTLNIQLKWRTCNHFIRPVTMQIKTKGQKVLTCIFAKSAGL*LYEVSLPWNTDILIWVRK*HV  7347

Range 4: 6860 to 7345 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
313.6 bits(678) 0.0 138/162(85%) 0/162(0%) Plus/Minus
Query        3  QI*LS*EMQHQANAQAYCQWSNSFGPIRRLLKRHLTA**STSSYVLLQQCRTSAYHQRSDLLISIR*QHQM*HLVPHKEV*NLNYAQLPNQLPPCQSKLAHPQHPTQMVNL*SLHQTCHYAHQNQRIEGTYMYFCQTCRSLTL*SEPPLEH*YFDMGQRIAR  488
                QI*LS*+MQHQANA A  Q  +SFGPIRRLLKRH TA**S S YVLLQQCRTSAYH+RSD LISIR*QHQM*HL PHKEV*N NYAQ  NQLPPCQSKLAHPQHPTQM NL*SLHQTCHYA+ NQR EGTYMYF Q CRSLTL*SEPPLEH*YFDMGQ+I R
Subject   6860  QI*LS*KMQHQANAHANRQRGDSFGPIRRLLKRHFTA**SISFYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLAPHKEV*NQNYAQPLNQLPPCQSKLAHPQHPTQMANL*SLHQTCHYAN*NQRTEGTYMYFRQICRSLTL*SEPPLEH*YFDMGQKITR  7345

Range 5: 6858 to 7277 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
287.4 bits(621) 0.0 124/140(89%) 0/140(0%) Minus/Plus
Query       71  *RAIL*PISKYQCSKGGSLHKVKDLQVWQKYM*VPSILWF*CA**QV**SDYRFTI*VGC*GCANLLWQGGS*FGSCA*FRFQTSL*GTRCYI*CCYLIEIKRSDL***ALVLHCCNKT*EEVDHHAVRCLFSNLRIGPK  490
                *R I *PISKYQCSKGGSLHKVKDLQ+W+KYM*VPS+LWF* A**QV**SDYRF I*VGC*GCANLLWQGGS*F  CA*F FQTSL*G RCYI*CCYLIEIK SDL **ALVLHCCNKT*+E+DHHAV+CLFSNLRIGPK
Subject   6858  *RVIF*PISKYQCSKGGSLHKVKDLQIWRKYM*VPSVLWF*FA**QV**SDYRFAI*VGC*GCANLLWQGGS*FSGCA*F*FQTSL*GARCYI*CCYLIEIKGSDLR**ALVLHCCNKT*KEIDHHAVKCLFSNLRIGPK  7277

Range 6: 7317 to 7346 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.9 bits(48) 0.0 9/10(90%) 0/10(0%) Minus/Plus
Query        2  CCIS*ESQIC  31
                CCI *ESQIC
Subject   7317  CCIF*ESQIC  7346

Range 7: 7103 to 7345 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
172.0 bits(369) 0.0 74/81(91%) 0/81(0%) Minus/Plus
Query        3  SNFLVRYEVLHLMLLPY*NQEIRPLMISTGSTLLQQDIGRS*SSCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNL  245
                SNFLVR EVLHLMLLPY*NQ IRP MISTGSTLLQQDI R+*SSCSEMPFQQPANWAKT+TPLTIG+GIGLVLHFLRKSNL
Subject   7103  SNFLVRCEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIERN*SSCSEMPFQQPANWAKTITPLTIGVGIGLVLHFLRKSNL  7345

Range 8: 6860 to 7054 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
138.5 bits(296) 0.0 60/65(92%) 0/65(0%) Minus/Plus
Query      294  TCYSLTHIKISVFQGRLTS*SQRPAGLAKIHVSTFYPLVLMCIVTGLMK*LQVHHLSWMLRVC*F  488
                TCY LTHIKISVFQGRLTS*SQRPA LAKIHVSTF PLVL+CIVTGLMK*LQV HLSWMLRVC*F
Subject   6860  TCYFLTHIKISVFQGRLTS*SQRPADLAKIHVSTFCPLVLICIVTGLMK*LQVRHLSWMLRVC*F  7054

Grapevine rupestris stem pitting associated virus isolate VF1, partial genome

Sequence ID: KT948710.1 Length: 8716 Number of Matches: 9

Range 1: 6860 to 7348 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
331.0 bits(716) 0.0 134/163(82%) 0/163(0%) Minus/Plus
Query        1  DVLFSDPYQNISVPREAHFIKSKTCRFGKNTCKYLLSFGFDVHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*DAFSATCELGQNCYSIDNRLGHWLGAAFPKKVKFA  489
                DVLFSDPYQNISVPREAHFIK+KTCRFG NTCKYL SFGFDVHSDR D V+ GSPFELDVEGVLICFGKEAVDLA AHNSDFKLPCEVRG+TF+VVTLLKSRDPTS+DKHWFY+AATRHR KLIIMQ*DAF ATC+LG +  SI++  GHW+G+   +KVKFA
Subject   6860  DVLFSDPYQNISVPREAHFIKTKTCRFGANTCKYLQSFGFDVHSDRVDAVVIGSPFELDVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFNVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*DAFPATCQLG*DHNSINHWPGHWIGSTLLEKVKFA  7348

Range 2: 6859 to 7347 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
245.8 bits(530) 0.0 113/163(69%) 0/163(0%) Plus/Minus
Query        2  ANLTFLGNAAPSQCPSLLSME*QFWPNSQVAEKASHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCTSKPKDRRYLHVFLPNLQVFDFMK*ASLGTLIF*YGSENSTS  490
                ANLTF  +  P QCP    ME    P+ QVA KASHC++I+   CLVAA *NQCLSSEVGSLDFN VTT NV PRTSQG+LKSELCA A+STAS PKQ+ TPSTS+SNG+P+ T+S LSL TSKPKD RYL V  PNLQV  FMK ASLGTL+F  GSENSTS
Subject   6859  ANLTFSRSVEPIQCPGQWLMELWS*PSWQVAGKASHCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTLNVEPRTSQGNLKSELCATARSTASFPKQMRTPSTSSSNGDPITTASTLSL*TSKPKDWRYLQVLAPNLQVLVFMKCASLGTLMFW*GSENSTS  7347

Range 3: 6860 to 7348 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
195.3 bits(420) 0.0 85/163(52%) 0/163(0%) Plus/Minus
Query        1  GKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDDQLLPMSCCSNVEPVLIIRGRIS*FQ*GNNIKCSTSYLTRKFEI*IMRSCQINCLLAKAN*HTLNIQLKW*TCNHFIRPVTMHIKTKG*KVLTCIFAKPAGL*LYEVSLPWNTDILIWVRE*HV  489
                GKFDFL+KC T PMP+P+VNGV VLAQ AGC KGISLH      M CC NVEP+L+    +   Q* NN+KC T +L  + E+ I+R+C I  LL+KAN ++LNIQ KW   N+ +  +TM+I+ K  +VL  +  KPA   LYEV LPWN D+L+ V E H+
Subject   6860  GKFDFLKKCRTNPMPRPMVNGVMVLAQLAGCWKGISLHYY*FASMPCCCNVEPMLVF*SWVPRLQ*RNNVKC*TPHLAGQLEVRIVRNC*IYSLLSKANENSLNIQFKWRPYNNCVHSITMNIEAKRLEVLAGVSTKPASFGLYEVCLPWNADVLVGV*EQHI  7348

Range 4: 7119 to 7346 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.0 bits(238) 0.0 53/76(70%) 0/76(0%) Minus/Plus
Query        3  RYEVLHLMLLPY*NQEIRPLMISTGSTLLQQDIGRS*SSCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNL  230
                R  V HL LL Y*+   +    S GSTL QQ I  +*  CSEMPFQQPANWAKT+TPLTIGLGIGLVLHFLRKSNL
Subject   7119  RCGVQHLTLLRY*SLGTQLQKTSIGSTLQQQGIEAN***CSEMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNL  7346

Range 5: 6864 to 7043 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.1 bits(92) 0.0 27/60(45%) 0/60(0%) Minus/Plus
Query      306  CYSLTHIKISVFQGRLTS*SQRPAGLAKIHVSTFYPLVLMCIVTGLMK*LQVHHLSWMLR  485
                C S T  + S FQGR TS*  + AGL     ST   L  M IV    + L   HL+WMLR
Subject   6864  CCSQTPTRTSAFQGRHTS*RPKLAGLVLTPASTSNLLASMFIVIEWTQLL*GRHLNWMLR  7043

Range 6: 6865 to 7161 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
99.6 bits(211) 0.0 49/99(49%) 0/99(0%) Minus/Plus
Query      188  AIL*PISKYQCSKGGSLHKVKDLQVWQKYM*VPSILWF*CA**QV**SDYRFTI*VGC*GCANLLWQGGS*FGSCA*FRFQTSL*GTRCYI*CCYLIEI  484
                A+L P+ ++Q SKGG+LHK ++LQVW  ++ VP I W  C+**    S YR  I* GC*G ++LLW+GG    SCA F  Q +L G    I* CY+IE+
Subject   6865  AVLRPLPEHQRSKGGTLHKDQNLQVWC*HLQVPPIFWLRCS***SGRSCYRVAI*TGC*GSSHLLWKGGCRSSSCAQF*LQVALRGAGFNI*RCYVIEV  7161

Range 7: 7186 to 7272 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.6 bits(78) 0.0 16/29(55%) 0/29(0%) Minus/Plus
Query       77  ALVLHCCNKT*EEVDHHAVRCLFSNLRIG  163
                ALVL C NK  ++ +++AVRCL SNL  G
Subject   7186  ALVLRCSNKASKQTNNNAVRCLSSNLPTG  7272

Range 8: 6864 to 7157 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.6 bits(174) 0.0 46/98(47%) 0/98(0%) Plus/Minus
Query      192  SIR*QHQM*HLVPHKEV*NLNYAQLPNQLPPCQSKLAHPQHPTQMVNL*SLHQTCHYAHQNQRIEGTYMYFCQTCRSLTL*SEPPLEH*YFDMGQRIA  485
                SI *Q  M +  P +  *+ N AQL +  PP QSK   PQHP QM  L* L    HY H++Q+I GT     QTC+  +L*S PPLE *    G R A
Subject   6864  SIT*QR*MLNPAPRRAT*SQNCAQLLDLQPPFQSK*ELPQHPVQMATL*QLRPLYHYEHRSQKIGGTCRC*HQTCKFWSL*SVPPLER*CSGRGLRTA  7157

Range 9: 7236 to 7346 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.0 bits(94) 0.0 22/37(59%) 0/37(0%) Plus/Minus
Query        3  QI*LS*EMQHQANAQAYCQWSNSFGPIRRLLKRHLTA  113
                QI*LS E+ +Q+NAQA   WS    P+ RLL+RHLTA
Subject   7236  QI*LSQEV*NQSNAQANG*WSYGLSPVGRLLERHLTA  7346

Grapevine rupestris stem pitting associated virus isolate SK704 A, complete genome

Sequence ID: KX274274.1 Length: 8725 Number of Matches: 7

Range 1: 6859 to 7347 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
328.2 bits(710) 0.0 131/163(80%) 0/163(0%) Minus/Plus
Query        1  DVLFSDPYQNISVPREAHFIKSKTCRFGKNTCKYLLSFGFDVHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*DAFSATCELGQNCYSIDNRLGHWLGAAFPKKVKFA  489
                DVLFSDPYQNISVPREAHFIK+KTCRFG NTC+YL SFGF+++SDR D V+ GSPFELDVEGVLICFGKEAVDLA AHNSDFKLPCEVRG+TF+VVTLLKSRDPTS+DKHWFY+AATRHR KLIIMQ*DAF ATC+LG +  SI++ LGHW+G+   +KVKFA
Subject   6859  DVLFSDPYQNISVPREAHFIKTKTCRFGANTCRYLQSFGFEIYSDRVDAVVIGSPFELDVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFNVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*DAFPATCQLG*DYNSINHWLGHWIGSTLLEKVKFA  7347

Range 2: 6858 to 7346 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
241.2 bits(520) 0.0 112/163(69%) 0/163(0%) Plus/Minus
Query        2  ANLTFLGNAAPSQCPSLLSME*QFWPNSQVAEKASHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCTSKPKDRRYLHVFLPNLQVFDFMK*ASLGTLIF*YGSENSTS  490
                ANLTF  +  P QCPS   ME    P+ QVA KAS+C++I+   CLVAA *NQCLSSEVGSLDFN VTT NV PRTSQG+LKSELCA A+STAS PKQ+ TPSTS+SNG+P+ T+S LSL  SKPKD RYL V  PNLQV  FMK ASLGTL+F  GSENSTS
Subject   6858  ANLTFSRSVEPIQCPSQWLMEL*S*PSWQVAGKASYCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTLNVEPRTSQGNLKSELCATARSTASFPKQMRTPSTSSSNGDPITTASTLSL*ISKPKDWRYLQVLAPNLQVLVFMKCASLGTLMFW*GSENSTS  7346

Range 3: 6859 to 7347 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
189.4 bits(407) 0.0 84/163(52%) 0/163(0%) Plus/Minus
Query        1  GKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDDQLLPMSCCSNVEPVLIIRGRIS*FQ*GNNIKCSTSYLTRKFEI*IMRSCQINCLLAKAN*HTLNIQLKW*TCNHFIRPVTMHIKTKG*KVLTCIFAKPAGL*LYEVSLPWNTDILIWVRE*HV  489
                GKFDFL+KC T PMPKP+VNGV VLAQ AGC KGI LH  Q   M CC NVEP+LI    +   Q* +N+KC T +LT + E+ I+R+C I  LL+KAN ++LNIQ KW   N+ +  +T+  + K  +V   +  KPA   LYEV LPWN D+L+ V E H+
Subject   6859  GKFDFLKKCRTNPMPKPMVNGVIVLAQLAGCWKGILLHYYQFASMPCCCNVEPMLIF*SWVPRLQ*RHNVKC*TPHLTGQLEVGIVRNC*IYGLLSKANENSLNIQFKWRPYNNCVHSITIDFEAKRLEVPAGVSTKPASFGLYEVCLPWNADVLVRV*EQHI  7347

Range 4: 7115 to 7345 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
110.6 bits(235) 0.0 53/77(69%) 0/77(0%) Minus/Plus
Query        3  VRYEVLHLMLLPY*NQEIRPLMISTGSTLLQQDIGRS*SSCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNL  233
                VR  V HL L  Y*+   +   IS GSTL QQ I  +*  CS+MPFQQPANWAKT+TPLTIGLGIGLVLHFLRKSNL
Subject   7115  VRCGVQHLTL*RY*SLGTQLQKISIGSTLQQQGIEAN***CSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNL  7345

Range 5: 6864 to 6974 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 19/37(51%) 0/37(0%) Minus/Plus
Query      374  AIL*PISKYQCSKGGSLHKVKDLQVWQKYM*VPSILW  484
                A+L P+ ++Q SKGG+LHK ++LQVW  ++ VP I W
Subject   6864  AVLRPLPEHQRSKGGTLHKDQNLQVWC*HLQVPPIFW  6974

Range 6: 6863 to 7345 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
127.5 bits(272) 0.0 76/161(47%) 0/161(0%) Plus/Minus
Query        3  QI*LS*EMQHQANAQAYCQWSNSFGPIRRLLKRHLTA**STSSYVLLQQCRTSAYHQRSDLLISIR*QHQM*HLVPHKEV*NLNYAQLPNQLPPCQSKLAHPQHPTQMVNL*SLHQTCHYAHQNQRIEGTYMYFCQTCRSLTL*SEPPLEH*YFDMGQRIA  485
                QI*LS E+ +Q+NAQA   WS S  P+ RLL+RHLTA  S     LL Q RT+AY  +     SI  Q  M +  PH+  *+ N AQL +  PP QSK   PQHP QM  L* L    HY  ++Q+I GT     QTC+  +L*S PPLE *    G R A
Subject   6863  QI*LSQEV*NQSNAQANG*WSYSLSPVGRLLERHLTALLSVCFDALLLQRRTNAYLLKLGP*TSITSQR*MLNPAPHRAT*SRNCAQLLDLRPPFQSK*ELPQHPVQMATL*QLRPLYHYRFRSQKIGGTCRC*HQTCKFWSL*SVPPLER*CSGKGLRTA  7345

Range 7: 7005 to 7271 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.4 bits(191) 0.0 46/89(52%) 0/89(0%) Minus/Plus
Query       77  SDYRFTI*VGC*GCANLLWQGGS*FGSCA*FRFQTSL*GTRCYI*CCYLIEIKRSDL***ALVLHCCNKT*EEVDHHAVRCLFSNLRIG  343
                S YR  I* GC*G ++LLW+GG    SCA FR Q +L*G    I* C +IE+   +   *ALVL C NK  ++ D++AVRCL SNL  G
Subject   7005  SCYRVAI*TGC*GSSHLLWKGGRRSSSCAQFRLQVAL*GAGFNI*RCDVIEV*GPNFRR*ALVLRCSNKASKQTDNNAVRCLSSNLPTG  7271

Nucleotide Sequence (2651 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 33 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
266
532
798
1064
1330
1596
1862
2128
2394
2651

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate SK704 A, complete genome

Sequence ID: KX274274.1 Length: 8725 Number of Matches: 16

Range 1: 2926 to 5136 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1755.5 bits(3825) 0.0 730/737(99%) 0/737(0%) Plus/Plus
Query        3  QCDRVVFATTGAGLSKLLDVPRSKKQSILVLEGALAMDTSYGPKILGSFEVFKGDFNIKKIEDGSIFVISYRAPVRSPGKLRVHRTECSFSGSREVLLGCQIEASADYDIDDFNKFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESIADPALSTQTVLKQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMSALFDITNEHIRHVEKIGNGPQSIKVDELREVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGVSVEGFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQ  2213
                QCDRVVFATTGAGLSKLLDVPRSKKQSILVLEGALAMDT YGPKILGSFEVFKGDFNIKKIEDGSIFVISYRAPVRSPGKLRVHRTECSFSGSREVLLGCQIEASADYDIDDFNKFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESIADPALSTQTVLKQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMSALFDITNEHIRHVEKIGNGPQSIKVDELR+VKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAF DYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGVSVEGFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGF+++IG+NEGVREEKLCGDPWLKVMLFLGQ
Subject   2926  QCDRVVFATTGAGLSKLLDVPRSKKQSILVLEGALAMDTGYGPKILGSFEVFKGDFNIKKIEDGSIFVISYRAPVRSPGKLRVHRTECSFSGSREVLLGCQIEASADYDIDDFNKFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESIADPALSTQTVLKQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFTDYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGVSVEGFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFSINIGKNEGVREEKLCGDPWLKVMLFLGQ  5136

Range 2: 2926 to 5127 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1590.6 bits(3465) 0.0 690/734(94%) 0/734(0%) Minus/Minus
Query        3  EKHDL*PRITTKLFLSHSFISPNANVEAIKEVGLTGKQVPYHILPTLRRQEVVKWFPSKM*EETLHAYTSNVYQVQIVTKA**GR*PPTIISME*VM*N*NPTMFEVQPR*FTKC*C*LLHTKVRLHNFLFLKA*NQNGI*GGLRPSQKEVMHIVKNGIVSERCSHGALLKMTWQPRLKHWIHKPPALNIIPVGLALK*SQYVTLLSP*YRAVLLGVICALTGVTSK*NESVTSYGQ*TKVNVARRKKLNLIKNHTMACL*IFNLSEKYFKGHNVPTFSL*FACLCHFATIIHFQVFFN*IS*SPPG*NKGHELTFRPLHEALVQKAFACSKSSKHNCQFPRFDI*S*YP*EPWLGIIKFLITYNTS*AS*QTSLQLFSPLKAWKVSYLRSIH*KEVKSRSFHFSQLIHLYALRAIANLLNMSYMFIGYVK*S*HASARINNLDFSINVTLGTNVECFEGLSEVHHVQATTLAQFFKDVICGRSAQIVKDIHLTSAERRGNSGYHAAIQWGTGLKMI*LQAQNST*RPLTISKFPTYLILWGDDDQPHMMPNAE*GYHLVLCISIVTKLLQNSLG*QSWICNGFTFNK*TYASFQSKPVCAQQETH*VPKAVTITRHRKFVKVINVIISRGLNLTTK*YFSRP*KGTFRPVDSQFARRSHRSPVRYYKYGAIFNFLNVEVPFEYLKRSQNLWSIAGIHCKCTFKD*Y*LLLAPRHI*QLR*ACTSCCKDNSVTL  2204
                EKH+ *PRITT+LFLS++FI  + + E I++V LT KQ+PYHILPTL R EVVKWFPSKM*EETLHAYTSNVYQVQIVTKA**GR*PPTIISME*VM*N*N TMFEVQPR*FTKC*C LLHTKVRLHNFLFLKA NQNGI*GGLRPSQKEVMHIVKNGIVSERCSHGALLKMTWQ  LKHWIHKPPALNI+PVGLALK*SQYVTLLSP*YRAVLLGVICALTGVTSK*NESVTSYG *TKVNVARRKKL+LIKNHTMACL*IFNLSEKYFKGHNVPTFSL*FACLCHFATIIHFQV FN*IS*SPPG*NKG+ELTFRPLH+A VQKAFACSKSSKH+CQFPRFDI*S*YP*EPWLGIIKFLITYNTS*AS*QTSLQLFSPLKAWKVSYLRSIH*KEVKSRSFHFSQ IHLYALRAIANLLN+SYMFIGYVK*S*HASARINNL+FSIN+TLGTNVECFEGLSEVHHVQATTLAQFFKD+ICGRSAQIVKDIHLTSAERRGNSGYHAAIQWGTGLKMI*LQAQNST*RPLTISKFPT+LILWGD+DQPHMMPNAE*GYHLVLCISIV KLLQN LG*QSWICNGFTFNK*TYASFQSKPVCAQQETH*VPKAVTITRHRKFVKVINVIISRGLNLTT+*YFSRP*KGTFRPVDSQFARRSHRSPVRYYKYGAIFNFLNVEVPFEYLKRSQNL SIAGIHCKCTFKD*Y*LLLAPRHI*QLR*ACTS CKDNSVTL
Subject   2926  EKHNF*PRITTQLFLSYTFILTDVDAETIEKVWLTWKQIPYHILPTLCR*EVVKWFPSKM*EETLHAYTSNVYQVQIVTKA**GR*PPTIISME*VM*N*NSTMFEVQPR*FTKC*CKLLHTKVRLHNFLFLKARNQNGI*GGLRPSQKEVMHIVKNGIVSERCSHGALLKMTWQSGLKHWIHKPPALNIVPVGLALK*SQYVTLLSP*YRAVLLGVICALTGVTSK*NESVTSYG**TKVNVARRKKLDLIKNHTMACL*IFNLSEKYFKGHNVPTFSL*FACLCHFATIIHFQVLFN*IS*SPPG*NKGYELTFRPLHKAFVQKAFACSKSSKHDCQFPRFDI*S*YP*EPWLGIIKFLITYNTS*AS*QTSLQLFSPLKAWKVSYLRSIH*KEVKSRSFHFSQFIHLYALRAIANLLNVSYMFIGYVK*S*HASARINNLNFSINITLGTNVECFEGLSEVHHVQATTLAQFFKDMICGRSAQIVKDIHLTSAERRGNSGYHAAIQWGTGLKMI*LQAQNST*RPLTISKFPTHLILWGDNDQPHMMPNAE*GYHLVLCISIVAKLLQNCLG*QSWICNGFTFNK*TYASFQSKPVCAQQETH*VPKAVTITRHRKFVKVINVIISRGLNLTTE*YFSRP*KGTFRPVDSQFARRSHRSPVRYYKYGAIFNFLNVEVPFEYLKRSQNLRSIAGIHCKCTFKD*Y*LLLAPRHI*QLR*ACTSGCKDNSVTL  5127

Range 3: 3309 to 5126 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1327.1 bits(2890) 0.0 563/606(93%) 0/606(0%) Plus/Plus
Query      386  SGFLVEHRRACFESWHTFIC*K*IHCRSSSVNPNCFEATW*QCLCRERDDSLILH*ASCEADHHHPRV*GKLEIWR**VAFMWNFVLAIKSFSTLCPIEWLHDNRYCLCARQT*GGCP*LSVQTFHKSHL*RIVPRWWPEHDVPR*GLRSIRHLCQV*H*WRNRGY*S*RTHVSFI*HNQ*TYKTC*EDWQWPAEHKGG*AERSETICS*PPFNEWIEDNLLSKL*EG*KAAGMFARRLNWCYK**EI**FQAMALRDINFKYQISGIDSCAWNFWSRQKLSVQELHEEV*R*VRDLCFTQEGSS*FN*KRPGNG*WLQSGKGRQIKERRLGRCDL*SISQKD*KSKGRPLCDF**GSAFSSWLR*PLSIDHKK*RFHFTCW*PLSKHI*LPKGPRDTRG*AK*HIEIT*GQVLQV*Y*EPEVCESNV*V*AAMSF*EGLHDCSVR*LCHFSQYA*LPSGSV*DLLRCHSGFKL*GKENCAVLLWYEATNTNIW*INGAELQTWWDFNFT*LIPY**S*VVNGPITL*SQFGLGKHYWCKRGGFPLTFCWETTLPLPDGEEWGECDKGLASR*AQLL*WLQR*HWAK*RSARGKALW*SLAKGHAF  2203
                SGFLVEHRRACFESWHTFIC*K*IHCRSSSVNPN FEATW QCLCRERDDSLILH*ASCEADH+HPRV*G+LEIWR**VAFMWNFVLAIKSFSTLCPIEWLHDNRYCLCARQT*GGCP*LSVQTFHKS+L*RIVPRWWPEHDVPR*GLRSIRHLCQV*+*WRN GY*S*RTHVSFI*HNQ*TYKT *EDWQWPAEHKGG* E+SETICS*PPFNEWIEDNLLSKL*EG*KAAGMFARRLNWCYK**EI**FQAMALRDINFKYQISGIDS AWNFWSRQKLSVQ+L+EEV*R*VR+LCFTQEGSS*FN*K PGNG*WLQSGKGRQIKERRLGRCDL*SISQKD*KSKGRPLCDF**G AFSSWLR*PLSI+H K*RFHFTCW*PLSKHI*LPKGPRDTRG*AK*HIEIT*GQVLQV Y*EPEVCESNV*V  AMSF*EGLHDCSV *LCHFSQYA*LPSGSV*DLLRCHSGF+L*GKENCAVLLWYEAT TNIW*INGAELQTWW+FNFT*LIPY**S*VVNGPITL*SQFGLGKHYWCKRGGFPLTFCWETTLPLP+G+EWGECDKG ASR*A+L  W Q  H  +*R  RGKA+W*S+AK +AF
Subject   3309  SGFLVEHRRACFESWHTFIC*K*IHCRSSSVNPNSFEATWRQCLCRERDDSLILH*ASCEADHYHPRV*GELEIWR**VAFMWNFVLAIKSFSTLCPIEWLHDNRYCLCARQT*GGCP*LSVQTFHKSYL*RIVPRWWPEHDVPR*GLRSIRHLCQV*Y*WRN*GY*S*RTHVSFI*HNQ*TYKTR*EDWQWPAEHKGG*TEKSETICS*PPFNEWIEDNLLSKL*EG*KAAGMFARRLNWCYK**EI**FQAMALRDINFKYQISGIDSRAWNFWSRQKLSVQKLYEEV*R*VRNLCFTQEGSS*FN*KGPGNG*WLQSGKGRQIKERRLGRCDL*SISQKD*KSKGRPLCDF**GPAFSSWLR*PLSINHTK*RFHFTCW*PLSKHI*LPKGPRDTRG*AK*HIEIT*GQVLQVQY*EPEVCESNV*VQTAMSF*EGLHDCSVH*LCHFSQYA*LPSGSV*DLLRCHSGFEL*GKENCAVLLWYEATYTNIW*INGAELQTWWNFNFT*LIPY**S*VVNGPITL*SQFGLGKHYWCKRGGFPLTFCWETTLPLPNGKEWGECDKGSASR*AKLFQWFQHQHR*E*RCTRGKAVW*SVAKSYAF  5126

Range 4: 2928 to 4367 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1067.8 bits(2324) 0.0 474/480(99%) 0/480(0%) Minus/Minus
Query        5  ITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRSFLIELARALLGETKVTNLPSDLFMKLLYRKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTSLSSSTFMLCGPLPIFSTCLICSLVMSNKADMRPLGLITSISPLMSHLAQMSNASKASARYIMFRPPPWHNSSKM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHKGHSLSPNFQLTSYSGVMMISLT*CLMQNKAIISFSA*ALSPSCFKTVWVDRAGSAMDSLSTNERMPAFKASPSVLNKKPTECQKQLPSPGTENLLKXXXXXXXXXSI*QPSSTSLDPEKEHSVLWTLNLPGDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKIFGP*LVSIASAPSRTSIDCFLLLGTSSNLDKPAPVVAKTTRSH  1444
                ITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRSFLIELARALLGETKVTNLPSDLF+KLLYRKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFT LSSSTFMLCGPLPIFSTCLICSLVMSNKADMRPLGLITSISPL+SHLAQMSNASKASARYIMFRPPPWHNSSK+*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHKGHSLSPNFQLTSYSGV+MISLT*CLMQNKAIISFSA*ALSPSCFKTVWVDRAGSAMDSLSTNERMPAFKASPSVLNKKPTECQKQLPSPGTENLLKSSMS*SAEASI*QPSSTSLDPEKEHSVLWTLNLPGDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKIFGP* VSIASAPSRTSIDCFLLLGTSSNLDKPAPVVAKTTRSH
Subject   2928  ITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRSFLIELARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTFLSSSTFMLCGPLPIFSTCLICSLVMSNKADMRPLGLITSISPLISHLAQMSNASKASARYIMFRPPPWHNSSKI*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHKGHSLSPNFQLTSYSGVIMISLT*CLMQNKAIISFSA*ALSPSCFKTVWVDRAGSAMDSLSTNERMPAFKASPSVLNKKPTECQKQLPSPGTENLLKSSMS*SAEASI*QPSSTSLDPEKEHSVLWTLNLPGDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKIFGP*PVSIASAPSRTSIDCFLLLGTSSNLDKPAPVVAKTTRSH  4367

Range 5: 3902 to 5545 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
950.9 bits(2069) 0.0 441/548(80%) 0/548(0%) Plus/Plus
Query      979  WMS*EK*NDLLLTSFQ*MDRR*LTFQALRGLKSCRDVC*EA*LVL*VMRNLMIPSHGSQGYQLQISNLGN*QLCLELLEQAKAFCTRAS*RGLKVSS*PLFHPGGL*LIQLKKTWKWMMVAKWQRQANQREKVGTL*PLKYFSERLKI*RQAIV*FLMRFSFFLLATLTFVY*P*EVTLSFHLLVTPVKAHMTPKRTARY*GLSKVTY*DYLRASPTGIILRAGGL*IQCLSLGCHVILRRAP*LQRSLTMPFFTICMTSFWLGLRPP*MPFWFQALRKRKLCSLTLV*SN*H*HLVNQRG*TSNMVGF*FHMTHSILMIVGG*RPYHALVTIWTW*TLLV*AWRVSSHILLGNHFTTS*RRRVGRM**GTCFPVSPTSLMASTLALGEMKECERKSFVVILG*RSCFS*AKMRIARLRKLSLNARMRNGLKPISH*VIWNQQGPGGLERWH*RNTVK*DVVMKRLNSSLMNIGVEEASN*ATRVKDLKAYIQGIKVTIR*PSSWLSGNV*SFLSLKLKLQN*GAQSHTGSSY*TLSFLRFH*MQATM  2622
                WM+*EK*NDLLLTSFQ*MDRR*LTFQALRGLKSCRDVC*EA*LVL*VMRNLMIPSHGSQGYQLQISNLGN*Q CLELLEQAKAFCT+A *RGLKVSS*PLFHPGGL*LIQLK+TWKWMMVAKWQRQANQREKVGTL*PLKYFSERLKI*RQAIV*FLMR SFFLLATLTFVY*P EVTLSFHLLVTPVKAHMTPKRTARY*GLSKVTY*DYLRASPTG ILRAGGL*IQCLS  CHVILRRAP*LQRSLTMPFFTICMTSFWLGLRPP*MPFWF+ALRKRKLCSLTLV*SN H*HLVNQRG*TSNMV F*FHMTHSILMIVGG*RPYHALVTIWTW*TLLV*AWRVSSHILLGNHFTTS*R+RVGRM**G CF VS T  M S      MK  ERKS VVI G*+ CFS*A+M+  +L+ LSL+ +M+NG K    * IW+Q G  GL +W *++ V+ DV M++L++S MN G    SN*A  V  L+A+I  I+V    P  W S N *SF S + KL++*G QS T +S  TLS+ + H*M ATM
Subject   3902  WMN*EK*NDLLLTSFQ*MDRR*LTFQALRGLKSCRDVC*EA*LVL*VMRNLMIPSHGSQGYQLQISNLGN*QSCLELLEQAKAFCTKAL*RGLKVSS*PLFHPGGL*LIQLKRTWKWMMVAKWQRQANQREKVGTL*PLKYFSERLKI*RQAIV*FLMRSSFFLLATLTFVY*PYEVTLSFHLLVTPVKAHMTPKRTARY*GLSKVTY*DYLRASPTGTILRAGGL*IQCLSPDCHVILRRAP*LQRSLTMPFFTICMTSFWLGLRPP*MPFWFRALRKRKLCSLTLV*SNLH*HLVNQRG*TSNMVEF*FHMTHSILMIVGG*RPYHALVTIWTW*TLLV*AWRVSSHILLGNHFTTS*RQRVGRM**GICFQVSQTFSMVSASTSVRMKVYERKSCVVIRG*KLCFS*ARMKTVKLKSLSLSVQMKNGSKHTYP*AIWSQPGLDGLGKWL*KSIVRYDVGMRQLSNSSMNTGGAWVSN*AMLVSVLRAFILDIRVMTPSPF*WPSENA*SFQSHRWKLRS*GVQSLTENSCSTLSYQKSH*MLATM  5545

Range 6: 2927 to 4015 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
834.1 bits(1814) 0.0 350/363(96%) 0/363(0%) Minus/Minus
Query        4  ANIPAAFQPSQSLESKLSSIHSLKGGQEQIVSLLSAHPPLCSAGHCQSSQHVLYVHWLCQIKLTCVR*D**PRFLH*CHTWHKCRMLRRPQRGTSCSGHHLGTILQRCDLWKVCTDS*GHPPHVCRAQRQ*RLSCSHSMGHRVENDLIASTKFHIKATHYLQISNLPHTLG***SASHDA*CRIRLSSRSLHKHCHQVASKQFGLTELDLQWIHFQQMNVCQLSKQARLCSTRNPLSAKSSYHHQAQKIC*SHQCHNQQRPQFDNQVVLL*TLKRNIPSCGLSICQEISQEPCKILQIWSHLQFS*C*SPL*IPQKIPKSLVHSWYPLQVHLQGLVLIASCS*AHLAT*ISLHQLLQRQLGHT  1092
                ANIPAAFQPSQSLESKLSSIHSLKGGQEQIVSL S HPPLCSAGHCQSSQ VLYVHWLCQIKLTCVR*D**P+FLH* HTWHKCRMLRRPQRGTSCSGHHLGTILQR DLWKVCTDS*GHPPHVCRAQRQ*RLSCSHSMGHRVENDLIASTKFHIKATHYLQISN PHTLG***SASHDA*CRIRLSSRSLHKHC QVASK FGLTELDLQWIHFQQMNVCQLSKQARLCSTRNPLSAKSSYHHQAQKIC*SHQCHNQQRPQFDN+VVLL*TLKRNIPSCGLSICQEISQEPCKILQIWSHLQFS*C*SPL*IPQKIPKS VHS YPLQVHLQGLVLIASCS*AHLAT*ISLHQ LQRQLGHT
Subject   2927  ANIPAAFQPSQSLESKLSSIHSLKGGQEQIVSLFSVHPPLCSAGHCQSSQRVLYVHWLCQIKLTCVR*D**PQFLH*YHTWHKCRMLRRPQRGTSCSGHHLGTILQRYDLWKVCTDS*GHPPHVCRAQRQ*RLSCSHSMGHRVENDLIASTKFHIKATHYLQISNSPHTLG***SASHDA*CRIRLSSRSLHKHCRQVASKLFGLTELDLQWIHFQQMNVCQLSKQARLCSTRNPLSAKSSYHHQAQKIC*SHQCHNQQRPQFDNRVVLL*TLKRNIPSCGLSICQEISQEPCKILQIWSHLQFS*C*SPL*IPQKIPKSSVHSRYPLQVHLQGLVLIASCS*AHLAT*ISLHQWLQRQLGHT  4015

Range 7: 4058 to 5560 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
773.6 bits(1682) 0.0 387/501(77%) 0/501(0%) Minus/Minus
Query     1135  HASG*HCGLHSVEP*KGKCLVRTSRMALRASILQLQLEA*KTLDVS*QP*GRLPNRYLYALDICFQIFHTRCSIARFFHTYVHQRTVESFHNHISLHGVPSMPSFQPTWPLLIPDYLMGYGF*TIPHSSIQTQFPQPRNPHLGLRKA*PLAKDHHKAFPLALLHFAQC*R*SH*RSWAHREAXXXXXXXXXXXXXXGKVVSQQNVRGNPPRLHQ*CLPSPNCD*SVIGPLTTYDHQYGMSHVKLKSHHV*SSAPLIHQMLVLVASYQSKTAQFSFPQSLKPEWHLRRS*TEPEGSHAYCEKWHSQRTLQSWSPS*NDMAA*TQTLDSQTSGSQYYTCRTCPQVISICHFAQPLVSRGPFGSHMCFDRGHQQVK*KRHFLWSIDKGQRSQEEKAEPHQKSHNGLPLDFQSF*EILQRSQRXXXXXXXXXXXXXXNHHPFPGLF*LN*LEPSWVKQRSRTYLQTXXXXSCTESFCLLQKFQAQLSIPEI*YLKLISLRAMAWN  2637
                H + *HCG HS+    GKC     R AL A   QL   A KT  V  +P  R  + Y Y  D C Q  H  CSIA      VH+R  E  H HI  H   S P  QP  P L PD      F*TI H + QTQ  Q  + H GLRKA* LA DHH AFPL  LH  +C* *+H*+S AH EA PLSHSPHS P GSGKVVSQQNVRGNPPRLHQ*CLPSPNCD*SVIGPLTTYDHQYGMSHVKLK HHV*SSAPLIHQMLV VASYQSKTAQFSFPQS KPEWHLRRS*TEPEGSHAYCEKWHSQ TLQSWSPS*NDMA  TQTLDSQTSGSQY TCRTCPQVISICHFAQPLVSRGPFGSHMCFDRGHQQVK*KRHF+W IDKGQRSQEEKA PHQKSHNGLPLDFQSF*EILQRSQRPNLLSLICLPLPLCNHHPFPG F*LN*LEPSWVKQR RTYLQTSS*S CTESFCLLQKFQA+LSIPEI*YLKLISLRAMAWN
Subject   4058  HETY*HCG*HSMGLLIGKCRAGIFRKALHALASQLPPVALKTSSVFGRPLKR*WSHYPYV*DKCSQNAHKHCSIAHPCPPCVHRRIAELPHTHIVPHDTLSKPFSQPI*PWLTPDCSRVCVF*TILHLNTQTQALQLHSLHPGLRKA*LLATDHHTAFPLVHLHSYRC*C*NH*KSLAHLEADPLSHSPHSLPLGSGKVVSQQNVRGNPPRLHQ*CLPSPNCD*SVIGPLTTYDHQYGMSHVKLKFHHV*SSAPLIHQMLV*VASYQSKTAQFSFPQSSKPEWHLRRS*TEPEGSHAYCEKWHSQ*TLQSWSPS*NDMAVWTQTLDSQTSGSQYCTCRTCPQVISICHFAQPLVSRGPFGSHMCFDRGHQQVK*KRHFVWLIDKGQRSQEEKAGPHQKSHNGLPLDFQSF*EILQRSQRPNLLSLICLPLPLCNHHPFPGPF*LN*LEPSWVKQRLRTYLQTSS*SFCTESFCLLQKFQARLSIPEI*YLKLISLRAMAWN  5560

Range 8: 4407 to 5135 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
542.2 bits(1177) 0.0 234/243(96%) 0/243(0%) Minus/Minus
Query     1484  WPKKSMTFSQGSPQSFSSRTPSFRPMLTLKPLKKLGSPGSKSLITFSPLFAVRKW*SGFPAKCERKPSTLTPVMFTKSKL*LKRDRAVNHLRSSVWNESCEIKIPPCLKFSPVDSPNVSVSCFIPK*DCTIFFSSKLETRMASKEVLDRARRKSCIL*KMA*SANAAVMEPFLK*HGSLDSNIGFTNLRLSILYL*DLPSSNLNMSLCSAPSIARSFWESYVL*QGSPASEMKASLLMVNRQR  2212
                WPKKS+TFS GSP SFSSRTPSF PML LKPLKK GSPGS+SLITFSPLFAVRKW*SGFPAKCERKPSTLTPVMFTKSKL*LKRDRAVNHLRSSVWNESCEIKIPPCLKFSPVDSPNVSVSCFIPK*DCTIFFSSKLETRMASKEVLDRARRKSCIL*KMA*S NAAVMEPFLK*HGSLDSNIGFTNLRLSILYL*DLPSSNLNMSLCSAPSIARSFWESYVL*QGSPASEMKASL MVNRQR
Subject   4407  WPKKSITFSHGSPHSFSSRTPSFLPMLMLKPLKKFGSPGSRSLITFSPLFAVRKW*SGFPAKCERKPSTLTPVMFTKSKL*LKRDRAVNHLRSSVWNESCEIKIPPCLKFSPVDSPNVSVSCFIPK*DCTIFFSSKLETRMASKEVLDRARRKSCIL*KMA*SVNAAVMEPFLK*HGSLDSNIGFTNLRLSILYL*DLPSSNLNMSLCSAPSIARSFWESYVL*QGSPASEMKASLRMVNRQR  5135

Range 9: 3161 to 3862 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
482.6 bits(1047) 0.0 227/234(97%) 0/234(0%) Plus/Plus
Query      238  AN*ESTGRNVPFQGLEKYYLVVKLRPLLIMTLMTLTNFLCLVMVTAFGTQWVSC*AQTGLL*KLAYVHLLKVNPLQIQLCQPKLF*SNLVTMLMQRTR**PYSALGIM*G*SSSPQSMR*VGNLEIVSGLYVEFCACNQIIFNPVPH*MXXXXXXXXXRSADVRWMSLTICADLPQITSLKNCAKVVA*T*CTSLRPSKHSTFVPSVTLMEKSRLLILADACQLYLT*PMNI*D  939
                AN*ESTGRNVPFQGLEKYY VVKLRPLLIMTLMTLTNFLCLVMVTAFGTQWVSC*AQTGLL*KLAYVHLLKVNPLQIQLCQPK F*SNL TMLMQRTR**PYSALGIM*G*S SPQSMR*VGNLEIVSGLYVEFCACNQIIFNPVPH*MAA**PLLPLRSADVRWMSLTICADLPQI SLKNCAKVVA*T*CTSLRPSKHSTFVPSV LMEK RLLILADACQLYLT*PMNI*D
Subject   3161  AN*ESTGRNVPFQGLEKYYSVVKLRPLLIMTLMTLTNFLCLVMVTAFGTQWVSC*AQTGLL*KLAYVHLLKVNPLQIQLCQPKQF*SNLATMLMQRTR**PYSALGIM*G*SLSPQSMR*VGNLEIVSGLYVEFCACNQIIFNPVPH*MAA**PLLPLRSADVRWMSLTICADLPQIISLKNCAKVVA*T*CTSLRPSKHSTFVPSVILMEKLRLLILADACQLYLT*PMNI*D  3862

Range 10: 5188 to 5574 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
293.9 bits(635) 0.0 119/129(92%) 0/129(0%) Plus/Plus
Query     2265  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMHEAVQE  2651
                WFKTHIPLSNLESTRARWVGKMALKE+REVRCGYE TQQFFDEHR G  EQLSNACERFESIYPRHKGNDS+TFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHN ++ HEAVQE
Subject   5188  WFKTHIPLSNLESTRARWVGKMALKEYREVRCGYEATQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVSMFHEAVQE  5574

Range 11: 2928 to 3278 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
267.3 bits(577) 0.0 113/117(97%) 0/117(0%) Plus/Plus
Query        5  V*PSCLCNNWCRLI*VARCA*EQEAINTSP*RCTCNGYQLWTKDFGIF*GIQRGLQH*EN*RWLHICNILQGSCEISWQIESPQDGMFLFRV*RSTTWLSN*GLC*L*H**L*QIFC  355
                V*PSCLCN+WCRLI*VARCA*EQEAINTSP*RCTCNGY+LWT+DFGIF*GIQRGLQH*EN*RWLHICNILQGSCEISWQIESPQDGMFLFRV*RSTT LSN*GLC*L*H**L*QIFC
Subject   2928  V*PSCLCNHWCRLI*VARCA*EQEAINTSP*RCTCNGYRLWTEDFGIF*GIQRGLQH*EN*RWLHICNILQGSCEISWQIESPQDGMFLFRV*RSTTRLSN*GLC*L*H**L*QIFC  3278

Range 12: 5187 to 5573 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
218.7 bits(471) 0.0 97/129(75%) 0/129(0%) Minus/Minus
Query     2264  SCTASCIRLALWLAFSGTLERKVSSKNFPYGFARLNFAAST*GLENFRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNC*VVS*PHLTSRCSFNAIFPTHLALVDSRLLNGIWVLNH  2650
                SCTAS   L LWLAF+GT +RKVSS+NFP GFARL+FAAST G ENF+RF TA++KV ESLPLCLG MLS  S ALLNCS +P LCSSKNC*V S PH TSR SF AIFPTHLALVDSRLL G+ VLNH
Subject   5187  SCTAS*NILTLWLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPMPPLCSSKNC*VASYPHRTSRYSFKAIFPTHLALVDSRLLKGMCVLNH  5573

Range 13: 2927 to 3124 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
152.7 bits(327) 0.0 64/66(97%) 0/66(0%) Plus/Plus
Query        4  SVTELSLQQLVQAYLSC*MCLGARSNQY*SLKVHLQWIPAMDQRFWDLLRYSKGTSTLRKLKMAPY  201
                SVTELSLQ LVQAYLSC*MCLGARSNQY*SLKVHLQWIPAMD+RFWDLLRYSKGTSTLRKLKMAPY
Subject   2927  SVTELSLQPLVQAYLSC*MCLGARSNQY*SLKVHLQWIPAMDRRFWDLLRYSKGTSTLRKLKMAPY  3124

Range 14: 5179 to 5571 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.9 bits(240) 0.0 59/131(45%) 0/131(0%) Minus/Minus
Query     2256  LYGFMHQVSIVACIQWNLRKESV**ELPVWLCAPQFCSFNLRLRKL*TFPDSHEEGYRIVTFMPWIYAFKSFTRVAQLLASSTPMFIKELLSRFITTSHFTVFLQCHLSNPPGPC*FQIT*WDMGFKPFLI  2648
                L+  M    IVA IQW+   ESV  E  V LC P   SF+L L KL  F D H +G  ++T M  I A K+ T +AQLL  + P+FI+ELLS  I TS+ T+  Q H  NP  P * QI    + F+PF I
Subject   5179  LHCLMKHTDIVASIQWDF**ESVEQEFSVRLCTP*LRSFHLWL*KLQAFSDGH*KGDGVITLMSRINALKTLTSIAQLLTHAPPVFIEELLSCLIPTSYLTILFQSHFPNPSSPG*LQIAQGYVCFEPFFI  5571

Range 15: 5337 to 5546 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.3 bits(121) 0.0 31/70(44%) 0/70(0%) Plus/Plus
Query     2414  AIEQRV*KI*KHISKA*R*RFGNLPHGCQETSKVF*ASS*SCKIEARKAIREVLTRHFPF*GSTECKPQC  2623
                AIEQ +*  *+H+S  * *   +L +G  +T +VF A+  SC+ +A KA+R++  RHFP     EC PQC
Subject   5337  AIEQCL*AF*EHLS*T*G**LHHLFNGRPKTLEVFKATGGSCEAKACKALRKIPARHFPIKSPIEC*PQC  5546

Range 16: 5163 to 5318 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.3 bits(99) 0.0 23/52(44%) 0/52(0%) Plus/Plus
Query     2240  *V*MLE*GMV*NPYPIK*SGINKGQVGWKDGIEGTP*SEMWL*NDSTVL**T  2395
                *V*+ +* MV N + ++ SG+N+G +GW++G E   *  MW+* +S +L *T
Subject   5163  *V*VFK*RMVQNTHTLEQSGVNQG*MGWENGFERVS*GTMWV*GNSAILR*T  5318

Grapevine rupestris stem pitting associated virus isolate CS BR, complete genome

Sequence ID: KX958435.1 Length: 8743 Number of Matches: 16

Range 1: 2927 to 5137 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1746.4 bits(3805) 0.0 723/737(98%) 0/737(0%) Plus/Plus
Query        3  QCDRVVFATTGAGLSKLLDVPRSKKQSILVLEGALAMDTSYGPKILGSFEVFKGDFNIKKIEDGSIFVISYRAPVRSPGKLRVHRTECSFSGSREVLLGCQIEASADYDIDDFNKFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESIADPALSTQTVLKQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMSALFDITNEHIRHVEKIGNGPQSIKVDELREVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGVSVEGFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQ  2213
                QCDRVVFATTGAGLSKLLDVPRSKKQSILVLEGALAMDT YGPK+LGSFEVFKGDFNIKKIEDGSIFVISYRAPVRSPGKLRVHRTECSFSGS+EVLLGCQIEASADYDIDDFNKFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESES+ADPALSTQTVLKQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRM ALFDITNEHIRHVEKIGNGPQSIKVDELR+VKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK+DLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKT LD ILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITG+SVEGFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGF+++IG+NEGVREEKLCGDPWLKVMLFLGQ
Subject   2927  QCDRVVFATTGAGLSKLLDVPRSKKQSILVLEGALAMDTGYGPKVLGSFEVFKGDFNIKKIEDGSIFVISYRAPVRSPGKLRVHRTECSFSGSKEVLLGCQIEASADYDIDDFNKFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESLADPALSTQTVLKQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMPALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTPLDVILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGISVEGFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFSINIGKNEGVREEKLCGDPWLKVMLFLGQ  5137

Range 2: 2927 to 5128 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1390.8 bits(3029) 0.0 600/734(82%) 0/734(0%) Minus/Minus
Query        3  EKHDL*PRITTKLFLSHSFISPNANVEAIKEVGLTGKQVPYHILPTLRRQEVVKWFPSKM*EETLHAYTSNVYQVQIVTKA**GR*PPTIISME*VM*N*NPTMFEVQPR*FTKC*C*LLHTKVRLHNFLFLKA*NQNGI*GGLRPSQKEVMHIVKNGIVSERCSHGALLKMTWQPRLKHWIHKPPALNIIPVGLALK*SQYVTLLSP*YRAVLLGVICALTGVTSK*NESVTSYGQ*TKVNVARRKKLNLIKNHTMACL*IFNLSEKYFKGHNVPTFSL*FACLCHFATIIHFQVFFN*IS*SPPG*NKGHELTFRPLHEALVQKAFACSKSSKHNCQFPRFDI*S*YP*EPWLGIIKFLITYNTS*AS*QTSLQLFSPLKAWKVSYLRSIH*KEVKSRSFHFSQLIHLYALRAIANLLNMSYMFIGYVK*S*HASARINNLDFSINVTLGTNVECFEGLSEVHHVQATTLAQFFKDVICGRSAQIVKDIHLTSAERRGNSGYHAAIQWGTGLKMI*LQAQNST*RPLTISKFPTYLILWGDDDQPHMMPNAE*GYHLVLCISIVTKLLQNSLG*QSWICNGFTFNK*TYASFQSKPVCAQQETH*VPKAVTITRHRKFVKVINVIISRGLNLTTK*YFSRP*KGTFRPVDSQFARRSHRSPVRYYKYGAIFNFLNVEVPFEYLKRSQNLWSIAGIHCKCTFKD*Y*LLLAPRHI*QLR*ACTSCCKDNSVTL  2204
                EKH+ *PRITT+LFLS++FI  + + E I++V LT K +PYHILPTL  Q+VVKWFPS+M*EETLHAY SN+YQVQ+V +A**GR*PP +ISME*VM*N*N TMFEVQPR*F+KC*C LLHTKVRLHNFL LKA*N N I*G LRPSQKEVMHIVKNGIVSE CSHGALL+MTW  RLKHWIHK P LN++PVGLALK  QY+TLL P*Y AVLLGVICALTGVTS+*NESVTSYG  T+VN+A RK+LNLI++HTMACL*IFNLSEK+FKGHNVPT SL*FACLCHFATIIHFQV FN*I *SPPG*NKG+E TFR LHEALVQKAFA SKSSKHNC FPRFDI*S*Y *+PWLGIIKFLITY+TS*AS* TSLQLF P KAWKVSY RSIH*+EVKSRSFHFSQ IHLYALRA+ NLL+MSYMFIGYVK S HASARI+N +  IN+TL TNVECFE LSE+HHVQ+TTLAQFFK+VICG S QIVK+IH TSAER GNS  HA+IQWGTGLKMI*LQAQNST*RPL +SK PT+ I WG++ QPHMMPNAE*GYHL+LCISIVTKLLQNSLG*QSWIC GFTF+K TY SFQSKP+CAQQE H*VPKAV ITR+RKFVKVIN+IISRGLNLTT+*+F R  KGTFRPVDSQFARR HRSPVRY+KYGAIFNFLNV+VPFEYLKRSQNLW IAGIHCKCTFKD*Y*LLL PRHI* L  ACTSCCK+NS+TL
Subject   2927  EKHNF*PRITTQLFLSYTFILTDVDAETIEKVWLTWK*IPYHILPTLCCQKVVKWFPSEM*EETLHAYASNIYQVQVVAEA**GR*PPAVISME*VM*N*NSTMFEVQPR*FSKC*CKLLHTKVRLHNFLLLKA*N*NDI*GSLRPSQKEVMHIVKNGIVSESCSHGALLEMTW*SRLKHWIHKSPTLNVVPVGLALKQPQYITLLGP*YCAVLLGVICALTGVTSE*NESVTSYG*QTQVNIAWRKQLNLIEDHTMACL*IFNLSEKHFKGHNVPTLSL*FACLCHFATIIHFQVSFN*IG*SPPG*NKGYEFTFRSLHEALVQKAFASSKSSKHNC*FPRFDI*S*YS*KPWLGIIKFLITYHTS*AS**TSLQLFCPFKAWKVSYFRSIH*EEVKSRSFHFSQFIHLYALRAVTNLLDMSYMFIGYVKQSWHASARIDNFNLPINITLSTNVECFESLSEIHHVQSTTLAQFFKNVICGGSTQIVKNIHFTSAERGGNSCDHASIQWGTGLKMI*LQAQNST*RPLAVSKLPTHFIFWGNNYQPHMMPNAE*GYHLILCISIVTKLLQNSLG*QSWICKGFTFDKRTYTSFQSKPICAQQEAH*VPKAVAITRNRKFVKVINIIISRGLNLTTE*HFLRSRKGTFRPVDSQFARRPHRSPVRYHKYGAIFNFLNVKVPFEYLKRSQNLWPIAGIHCKCTFKD*Y*LLLTPRHI**LGQACTSCCKNNSITL  5128

Range 3: 2926 to 5127 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1342.2 bits(2923) 0.0 590/734(80%) 0/734(0%) Plus/Plus
Query        2  SV*PSCLCNNWCRLI*VARCA*EQEAINTSP*RCTCNGYQLWTKDFGIF*GIQRGLQH*EN*RWLHICNILQGSCEISWQIESPQDGMFLFRV*RSTTWLSN*GLC*L*H**L*QIFCXXXXXXXXXXSGFLVEHRRACFESWHTFIC*K*IHCRSSSVNPNCFEATW*QCLCRERDDSLILH*ASCEADHHHPRV*GKLEIWR**VAFMWNFVLAIKSFSTLCPIEWLHDNRYCLCARQT*GGCP*LSVQTFHKSHL*RIVPRWWPEHDVPR*GLRSIRHLCQV*H*WRNRGY*S*RTHVSFI*HNQ*TYKTC*EDWQWPAEHKGG*AERSETICS*PPFNEWIEDNLLSKL*EG*KAAGMFARRLNWCYK**EI**FQAMALRDINFKYQISGIDSCAWNFWSRQKLSVQELHEEV*R*VRDLCFTQEGSS*FN*KRPGNG*WLQSGKGRQIKERRLGRCDL*SISQKD*KSKGRPLCDF**GSAFSSWLR*PLSIDHKK*RFHFTCW*PLSKHI*LPKGPRDTRG*AK*HIEIT*GQVLQV*Y*EPEVCESNV*V*AAMSF*EGLHDCSVR*LCHFSQYA*LPSGSV*DLLRCHSGFKL*GKENCAVLLWYEATNTNIW*INGAELQTWWDFNFT*LIPY**S*VVNGPITL*SQFGLGKHYWCKRGGFPLTFCWETTLPLPDGEEWGECDKGLASR*AQLL*WLQR*HWAK*RSARGKALW*SLAKGHAF  2203
                SV* SC CNNWCRL+   RCA*E EAINTSP*RCTCNGY+LW K FGIF*GIQRGL H*EN*RWLHIC+ILQGSCE+SWQIESPQDGMFLF +* S T LSN*GLC*L*+**L*QIFC+W*W LLLALSG LVEHR ACFESW+TF+C K*I CRSSSVNPNCFEATW*QCLCRE DDSLILH*ASCE D+++PR+* +LE+WR  VAFMWNFVLA+KSFSTLCPIEW+HD+ YCL ARQT* GC *LSV T HKSH *RIVPRWW EHDV R*G RSIRHLC V*+*W +  Y S*RTH S +*HNQ*TYKTC EDW  PA+HKGG* E+SETICS*PP NEWIE+NLLSKL*+G KAA MF RRLNWC K**EI**FQAMA R+INFKYQISGI+SCAWNFWS QKL VQELHEE+*R*+R+LCFTQEGSS FN*KRPGNG*WLQSGKGRQIKER LGRCDL*S+SQKD*KSKGRPLCD  *GSA SS L *P+S +H K*RFHFT W*PLSKHI*LPKGPR+TRG AK*+IE+ *GQVLQV +*E E+CESNV*V*  MSF EGLHDCS R*LCHFSQYA*LPSG V*D  RCHS FKL*G+ENCAVLLWYEAT TNIW INGAELQTWW+FNFT*LIPY**  VVNGPITL  Q GLGK+YW KRGGFPLTF WETTLPL D +EWGECDKG  SR*A+L  W Q  H  +*R  RGKA+W*S+AK +AF
Subject   2926  SV*SSCFCNNWCRLVQATRCA*E*EAINTSP*RCTCNGYRLWAKGFGIF*GIQRGL*H*EN*RWLHICDILQGSCEVSWQIESPQDGMFLFWI*GSATRLSN*GLC*L*Y**L*QIFCSW*WQLLLALSGLLVEHRWACFESWYTFVCRK*IPCRSSSVNPNCFEATW*QCLCRE*DDSLILH*ASCEVDNYYPRI*SELEVWRQRVAFMWNFVLAVKSFSTLCPIEWMHDHSYCLRARQT*SGCS*LSV*TLHKSHF*RIVPRWWTEHDVSR*GFRSIRHLC*V*Y*WGD*SYQS*RTHASSV*HNQ*TYKTCREDW*RPAKHKGG*TEKSETICS*PPLNEWIENNLLSKL*KGRKAARMFTRRLNWCDK**EI**FQAMAFRNINFKYQISGINSCAWNFWSWQKLFVQELHEEI*R*IRNLCFTQEGSSQFN*KRPGNG*WLQSGKGRQIKERGLGRCDL*SVSQKD*KSKGRPLCDLR*GSAVSSRLC*PVSANHTK*RFHFTRW*PLSKHI*LPKGPRNTRGRAK*YIEVA*GQVLQVQH*ESEICESNV*V*TTMSFQEGLHDCSFR*LCHFSQYA*LPSG*V*DSPRCHSSFKL*GEENCAVLLWYEATYTNIWRINGAELQTWWNFNFT*LIPY**PQVVNGPITLQPQLGLGKYYWHKRGGFPLTFRWETTLPLSDSKEWGECDKGSTSR*AKLFQWFQHQHR*E*RCTRGKAVW*SVAKSYAF  5127

Range 4: 2926 to 4368 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1045.8 bits(2276) 0.0 464/481(96%) 0/481(0%) Minus/Minus
Query        2  ITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRSFLIELARALLGETKVTNLPSDLFMKLLYRKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTSLSSSTFMLCGPLPIFSTCLICSLVMSNKADMRPLGLITSISPLMSHLAQMSNASKASARYIMFRPPPWHNSSKM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHKGHSLSPNFQLTSYSGVMMISLT*CLMQNKAIISFSA*ALSPSCFKTVWVDRAGSAMDSLSTNERMPAFKASPSVLNKKPTECQKQLPSPGTENLLKXXXXXXXXXSI*QPSSTSLDPEKEHSVLWTLNLPGDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKIFGP*LVSIASAPSRTSIDCFLLLGTSSNLDKPAPVVAKTTRSH*  1444
                ITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRS LIELARALLGETKVTNLPSDLFMKLLY+KLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFT LSSSTFMLCGPLPIFSTCLICSLVMSN+A MRPLGLITSISPL+SHLAQMSNASKASARYIMF PPPWHNSSKM*FVEGLHR*LRTSTSRLPSAEAIAVIM PFNGAQG*K*FDCKHKIPHKGHSLSPNFQLTSYSGV++I+LT*CLMQNKAIISFSA*ALSPSCFKTVWVDRAGSA DSLSTNER+PAFKASPSVLNKKPTECQKQLPSPGTENLLKSS+S*SAEASI*QPSSTSLDPEKEHSVLWTLNLPGDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPK FGP* VSIASAPSRTSIDCFLLLGTSS+LDKPAPVVAKTTRSH*
Subject   2926  ITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRSLLIELARALLGETKVTNLPSDLFMKLLYKKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTFLSSSTFMLCGPLPIFSTCLICSLVMSNRAGMRPLGLITSISPLISHLAQMSNASKASARYIMFSPPPWHNSSKM*FVEGLHR*LRTSTSRLPSAEAIAVIMHPFNGAQG*K*FDCKHKIPHKGHSLSPNFQLTSYSGVIIINLT*CLMQNKAIISFSA*ALSPSCFKTVWVDRAGSARDSLSTNERIPAFKASPSVLNKKPTECQKQLPSPGTENLLKSSIS*SAEASI*QPSSTSLDPEKEHSVLWTLNLPGDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKTFGP*PVSIASAPSRTSIDCFLLLGTSSSLDKPAPVVAKTTRSH*  4368

Range 5: 3903 to 5549 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
829.0 bits(1803) 0.0 403/549(73%) 0/549(0%) Plus/Plus
Query      979  WMS*EK*NDLLLTSFQ*MDRR*LTFQALRGLKSCRDVC*EA*LVL*VMRNLMIPSHGSQGYQLQISNLGN*QLCLELLEQAKAFCTRAS*RGLKVSS*PLFHPGGL*LIQLKKTWKWMMVAKWQRQANQREKVGTL*PLKYFSERLKI*RQAIV*FLMRFSFFLLATLTFVY*P*EVTLSFHLLVTPVKAHMTPKRTARY*GLSKVTY*DYLRASPTGIILRAGGL*IQCLSLGCHVILRRAP*LQRSLTMPFFTICMTSFWLGLRPP*MPFWFQALRKRKLCSLTLV*SN*H*HLVNQRG*TSNMVGF*FHMTHSILMIVGG*RPYHALVTIWTW*TLLV*AWRVSSHILLGNHFTTS*RRRVGRM**GTCFPVSPTSLMASTLALGEMKECERKSFVVILG*RSCFS*AKMRIARLRKLSLNARMRNGLKPISH*VIWNQQGPGGLERWH*RNTVK*DVVMKRLNSSLMNIGVEEASN*ATRVKDLKAYIQGIKVTIR*PSSWLSGNV*SFLSLKLKLQN*GAQSHTGSSY*TLSFLRFH*MQATML  2625
                WM+*EK*NDLLLTS Q*MDR+*LTFQAL+G KSC+DV *EA*LV *VMRNLMIPSHG Q YQLQISNLGN*QLCLELLE AKAFCTRAS*R LKV+S*PLFHPGGL* IQLK+TWKWMMVAKWQRQANQRE+VGTL*PLK FSERLKI*RQAIV*  MRFS FL A LT V *P EVTLSFH LVTPVKAHMTPKRTA+Y*G SKV Y*  LRASPTG  LR G L*IQCLSL  HVI RRAP*LQ SLTMPFFTICMTSFWLGLR P*M F FQALR+RKLCSLTLV*SN H*HL NQRG*TSNMV F*FHMTHSILM  GG*RPYHA  T WTW* LL *AWRVSSHI LGNHFTT *++RVGRM**G  F VS T  M S      MK  ERKS VVI G*+ CFS*A+MR  +L+ LSL+ +M+NG K    * IW+Q G  GL +W *R+TV+ DV MK+L++S MN G E ASN*A  V  LKA+I   +     P  W S N *SF S + KL++*G QS  G+S  TLS+ + H*M ATML
Subject   3903  WMN*EK*NDLLLTSSQ*MDRK*LTFQALKGQKSCKDVY*EA*LV**VMRNLMIPSHGFQEYQLQISNLGN*QLCLELLELAKAFCTRAS*RDLKVNS*PLFHPGGL*PIQLKETWKWMMVAKWQRQANQRERVGTL*PLKCFSERLKI*RQAIV*SSMRFSCFLQAMLTCVC*PYEVTLSFHSLVTPVKAHMTPKRTAQY*GPSKVIY*GCLRASPTGTTLRVGDL*IQCLSLDYHVISRRAP*LQLSLTMPFFTICMTSFWLGLRLP*MSF*FQALRRRKLCSLTLV*SNLH*HLENQRG*TSNMVEF*FHMTHSILMTAGG*RPYHASATTWTW*ILLA*AWRVSSHISLGNHFTTF*QQRVGRM**GIYFQVSQTFSMVSASTSVRMKVYERKSCVVIRG*KLCFS*ARMRTVKLKSLSLSVQMKNGSKHTYP*AIWSQPGLDGLGKWP*RSTVRYDVGMKQLSNSSMNTGGEWASN*AMPVNVLKAFILDTRAMTPLPF*WPSENA*SFQSHRWKLRS*GVQSLMGNSCLTLSYRKSH*MLATML  5549

Range 6: 2925 to 4013 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
671.4 bits(1459) 0.0 295/363(81%) 0/363(0%) Minus/Minus
Query        1  NIPAAFQPSQSLESKLSSIHSLKGGQEQIVSLLSAHPPLCSAGHCQSSQHVLYVHWLCQIKLTCVR*D**PRFLH*CHTWHKCRMLRRPQRGTSCSGHHLGTILQRCDLWKVCTDS*GHPPHVCRAQRQ*RLSCSHSMGHRVENDLIASTKFHIKATHYLQISNLPHTLG***SASHDA*CRIRLSSRSLHKHCHQVASKQFGLTELDLQWIHFQQMNVCQLSKQARLCSTRNPLSAKSSYHHQAQKIC*SHQCHNQQRPQFDNQVVLL*TLKRNIPSCGLSICQEISQEPCKILQIWSHLQFS*C*SPL*IPQKIPKSLVHSWYPLQVHLQGLVLIASCS*AHLAT*ISLHQLLQRQLGHTD  1089
                NI AAF P QSLESKL SIHSL+GGQEQIVSL S HPPLC AG  QSS+HVLYVHWLCQ +L CVR*D** +  H* HT HKCRMLR+PQR TSCS HHLGTILQ+CDLW+V TDS* HP HVCRA+RQ*  SC HSMGHRVENDL ASTKFHIKAT  LQ SN  H LG** S SHDA*CRIRLSS SLHKHCHQVASKQFGLTELDLQ IHF+Q NV QLSKQA LCSTR+PLSAKSS HHQ QKIC*SHQ HNQQRPQFDN+V L *  KRNIPSCGLSICQE SQEPCKI QIWSHLQFS*C*SPL*IPQKIPK L HS YPLQVHLQGLVLIAS S*AHL    SLHQLLQ+QL HTD
Subject   2925  NILAAFLPFQSLESKLFSIHSLRGGQEQIVSLFSVHPPLCFAGRYQSSRHVLYVHWLCQTELACVR*D**LQSPH*YHT*HKCRMLRKPQRDTSCSVHHLGTILQKCDLWRVYTDS*EHPLHVCRARRQ*L*SCIHSMGHRVENDLTASTKFHIKATRCLQTSNSLHILG**LSTSHDA*CRIRLSSHSLHKHCHQVASKQFGLTELDLQGIHFRQTNVYQLSKQAHLCSTRSPLSAKSSCHHQEQKIC*SHQYHNQQRPQFDNRVALP*IQKRNIPSCGLSICQETSQEPCKISQIWSHLQFS*C*SPL*IPQKIPKPLAHSRYPLQVHLQGLVLIASYS*AHLVAWTSLHQLLQKQLDHTD  4013

Range 7: 4059 to 5378 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
658.1 bits(1430) 0.0 331/440(75%) 0/440(0%) Minus/Minus
Query     1135  DICFQIFHTRCSIARFFHTYVHQRTVESFHNHISLHGVPSMPSFQPTWPLLIPDYLMGYGF*TIPHSSIQTQFPQPRNPHLGLRKA*PLAKDHHKAFPLALLHFAQC*R*SH*RSWAHREAXXXXXXXXXXXXXXGKVVSQQNVRGNPPRLHQ*CLPSPNCD*SVIGPLTTYDHQYGMSHVKLKSHHV*SSAPLIHQMLVLVASYQSKTAQFSFPQSLKPEWHLRRS*TEPEGSHAYCEKWHSQRTLQSWSPS*NDMAA*TQTLDSQTSGSQYYTCRTCPQVISICHFAQPLVSRGPFGSHMCFDRGHQQVK*KRHFLWSIDKGQRSQEEKAEPHQKSHNGLPLDFQSF*EILQRSQRXXXXXXXXXXXXXXNHHPFPGLF*LN*LEPSWVKQRSRTYLQTXXXXSCTESFCLLQKFQAQLSIPEI*YLKLISLRAMAWN  2454
                D CFQ  H  C IAR F   VH+R  E FH HI  HG PS P  QP  P L P+      F*TI H + QTQ  Q  +PH GLRKA* LA DHH AFPL  LH  +C* *+H*+S AH E  PLSHSPHS  S SGKVVSQ+NVRGNPPRL Q* LPSP+C *SVIGPLTT  HQYGMSHVKLK HHV*SSAPLI QMLV VASYQSKTAQFS PQSLK E HL  S*T PEGSHAYCEKWHSQR LQSWSPS*NDM  *TQTLDSQ S SQ  TCRTCPQ  SI HFA+PLV RGPFGSHMCFDRGHQ+VK*KRHF+W  D GQ S EE AEPH++SHNGLPLDFQSF*E LQRSQRPN LSLICLPLPLCNHHPFPGLF*LN LEPSWVKQR R YLQ SS*SSCT+SFC LQKFQAQL IPEI*YLKLI L+AMAWN
Subject   4059  DKCFQNVHRHCLIARPFPPCVHRRIAELFHTHIVPHGAPSRPFSQPI*PWLTPNCSRVCVF*TILHLNTQTQALQLHSPHPGLRKA*LLATDHHTAFPLVHLHSYRC*C*NH*KSLAHLEVDPLSHSPHSLLSESGKVVSQRNVRGNPPRLCQ*YLPSPSCG*SVIGPLTTCGHQYGMSHVKLKFHHV*SSAPLILQMLV*VASYQSKTAQFSSPQSLKLE*HLGES*T*PEGSHAYCEKWHSQRKLQSWSPS*NDMVV*TQTLDSQISDSQCCTCRTCPQATSIYHFARPLVLRGPFGSHMCFDRGHQRVK*KRHFVWLADTGQHSLEETAEPHRRSHNGLPLDFQSF*ETLQRSQRPNPLSLICLPLPLCNHHPFPGLF*LNWLEPSWVKQRLRIYLQISS*SSCTKSFCQLQKFQAQLLIPEI*YLKLIFLKAMAWN  5378

Range 8: 4408 to 5136 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
517.0 bits(1122) 0.0 223/243(92%) 0/243(0%) Minus/Minus
Query     1484  WPKKSMTFSQGSPQSFSSRTPSFRPMLTLKPLKKLGSPGSKSLITFSPLFAVRKW*SGFPAKCERKPSTLTPVMFTKSKL*LKRDRAVNHLRSSVWNESCEIKIPPCLKFSPVDSPNVSVSCFIPK*DCTIFFSSKLETRMASKEVLDRARRKSCIL*KMA*SANAAVMEPFLK*HGSLDSNIGFTNLRLSILYL*DLPSSNLNMSLCSAPSIARSFWESYVL*QGSPASEMKASLLMVNRQR  2212
                WPKKS+TFS GSP SFSSRTPSF PML LKPLKK GSPGS+SLITFSPLFAVRKW*SGFPAKCERKPSTL PV+FTKSKL LKRDRAVNHLRSSVWNESCEIKIPPCLKFSPVDSPNVSVSCFIPK*DCTIFFSSKLETRM S+ VLD ARRKSCIL*KMA*SA AAVMEPFLK*HGSLDSNIGFTNLRLS+LYL*DLPSSNLN+SLCSAPSIARSFWESYVL*QGSPASEMKASL MV+R R
Subject   4408  WPKKSITFSHGSPHSFSSRTPSFLPMLMLKPLKKFGSPGSRSLITFSPLFAVRKW*SGFPAKCERKPSTLMPVIFTKSKLWLKRDRAVNHLRSSVWNESCEIKIPPCLKFSPVDSPNVSVSCFIPK*DCTIFFSSKLETRMTSRGVLDLARRKSCIL*KMA*SAKAAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVL*QGSPASEMKASLRMVSRHR  5136

Range 9: 3162 to 3863 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
396.0 bits(858) 0.0 191/234(82%) 0/234(0%) Plus/Plus
Query      238  AN*ESTGRNVPFQGLEKYYLVVKLRPLLIMTLMTLTNFLCLVMVTAFGTQWVSC*AQTGLL*KLAYVHLLKVNPLQIQLCQPKLF*SNLVTMLMQRTR**PYSALGIM*G*SSSPQSMR*VGNLEIVSGLYVEFCACNQIIFNPVPH*MXXXXXXXXXRSADVRWMSLTICADLPQITSLKNCAKVVA*T*CTSLRPSKHSTFVPSVTLMEKSRLLILADACQLYLT*PMNI*D  939
                AN*ESTGRNVPF  L K Y VVKLRPLLIM LMTLTNFL LVM TAFGTQW SC*AQ GLL*KL YV L KVNPLQIQLCQPKLF*SNLVTMLMQR R**PYSALGIM*G*   PQ+M+*VG+LE  SGLYVEFCAC+QIIFNPVPH*M A*  LLP RSADV+WM LTIC D PQIT LKNCAKVV *T*C SLR SKHSTFV SV LM + +L ILADACQL LT*PMNI*D
Subject   3162  AN*ESTGRNVPFLDLRKCYSVVKLRPLLIMILMTLTNFLFLVMATAFGTQWASC*AQMGLL*KLVYVRLSKVNPLQIQLCQPKLF*SNLVTMLMQRMR**PYSALGIM*G**LLPQNMK*VGSLETASGLYVEFCACSQIIFNPVPH*MDA*SQLLPPRSADVKWMFLTICVDPPQITFLKNCAKVVD*T*CISLRLSKHSTFVLSVILMGRLKLSILADACQLCLT*PMNI*D  3863

Range 10: 5189 to 5575 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
301.2 bits(651) 0.0 122/129(95%) 0/129(0%) Plus/Plus
Query     2265  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMHEAVQE  2651
                WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHR G  EQLSNACERFESIYPRHKGNDS+TFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHN N+ HEAVQE
Subject   5189  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVNMFHEAVQE  5575

Range 11: 5188 to 5574 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
225.6 bits(486) 0.0 99/129(77%) 0/129(0%) Minus/Minus
Query     2264  SCTASCIRLALWLAFSGTLERKVSSKNFPYGFARLNFAAST*GLENFRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNC*VVS*PHLTSRCSFNAIFPTHLALVDSRLLNGIWVLNH  2650
                SCTAS   L LWLAF+GT +RKVSS+NFP GFARL+FAAST G ENFRRF TA++KV ESLPLCLG MLS  S ALLNCS +P LCSSKNC*VVS PH TSRCSF AIFPTHLALVDS+LL G+ VLNH
Subject   5188  SCTAS*NILTLWLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFRRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPIPPLCSSKNC*VVSYPHRTSRCSFKAIFPTHLALVDSKLLKGMCVLNH  5574

Range 12: 2925 to 3125 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
133.5 bits(285) 0.0 59/67(88%) 0/67(0%) Plus/Plus
Query        1  VSVTELSLQQLVQAYLSC*MCLGARSNQY*SLKVHLQWIPAMDQRFWDLLRYSKGTSTLRKLKMAPY  201
                VSV EL LQQLVQA  S *MCLG RSNQY*SLKVHLQWIPAM QRFWDLLRYSKGT TLRKLKMAPY
Subject   2925  VSVIELFLQQLVQACPSY*MCLGVRSNQY*SLKVHLQWIPAMGQRFWDLLRYSKGTLTLRKLKMAPY  3125

Range 13: 5180 to 5572 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
122.5 bits(261) 0.0 63/131(48%) 0/131(0%) Minus/Minus
Query     2256  LYGFMHQVSIVACIQWNLRKESV**ELPVWLCAPQFCSFNLRLRKL*TFPDSHEEGYRIVTFMPWIYAFKSFTRVAQLLASSTPMFIKELLSRFITTSHFTVFLQCHLSNPPGPC*FQIT*WDMGFKPFLI  2648
                L+  M  ++IVA I W+ R ESV  E P+ LC P   SF+L L KL  F D H +G  ++  +  I AFK+FT +A LLA S P+FI+ELLS FI TS+ TV LQ H  NP  P * QI    + F+PF I
Subject   5180  LHCLMKHINIVASI*WDFR*ESVKQEFPIRLCTP*LRSFHLWL*KLQAFSDGH*KGNGVIALVSRINAFKTFTGIA*LLAHSPPVFIEELLSCFIPTSYLTVLLQGHFPNPSSPG*LQIAQGYVCFEPFFI  5572

Range 14: 5164 to 5379 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.4 bits(143) 0.0 34/72(47%) 0/72(0%) Plus/Plus
Query     2240  *V*MLE*GMV*NPYPIK*SGINKGQVGWKDGIEGTP*SEMWL*NDSTVL**T*VWKKRAIEQRV*KI*KHIS  2455
                *V*+ +* MV N + ++  G+N+G +GW++G+EG P*  MW+*N+S +L *T     RAI+Q +*  *KH+S
Subject   5164  *V*VFK*RMVQNTHTLEQFGVNQG*MGWENGLEGAP*GTMWV*NNSAILR*TQGGNGRAIKQCL*TF*KHLS  5379

Range 15: 5413 to 5550 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.9 bits(83) 0.0 19/46(41%) 0/46(0%) Plus/Plus
Query     2489  HGCQETSKVF*ASS*SCKIEARKAIREVLTRHFPF*GSTECKPQC*  2626
                +G  +T +VF A+  SC+ +A KA+ E+   HFP     +C PQC*
Subject   5413  NGRPKTPEVFKATGGSCEAKACKALWEIPA*HFPIESPIKC*PQC*  5550

Range 16: 5415 to 5561 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.9 bits(61) 0.0 20/49(41%) 0/49(0%) Minus/Minus
Query     2491  HASG*HCGLHSVEP*KGKCLVRTSRMALRASILQLQLEA*KTLDVS*QP  2637
                H + *HCG H +    GKC    S  AL A   QL   A KT  V  +P
Subject   5415  HETY*HCG*HLMGLSIGKCQAGISHKALHALASQLPPVALKTSGVFGRP  5561

Grapevine rupestris stem pitting associated virus isolate VF1, partial genome

Sequence ID: KT948710.1 Length: 8716 Number of Matches: 15

Range 1: 2927 to 5137 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1745.0 bits(3802) 0.0 724/737(98%) 0/737(0%) Plus/Plus
Query        3  QCDRVVFATTGAGLSKLLDVPRSKKQSILVLEGALAMDTSYGPKILGSFEVFKGDFNIKKIEDGSIFVISYRAPVRSPGKLRVHRTECSFSGSREVLLGCQIEASADYDIDDFNKFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESIADPALSTQTVLKQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMSALFDITNEHIRHVEKIGNGPQSIKVDELREVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGVSVEGFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQ  2213
                QCDRVVFATTGAGLSKLLDVPRSKKQSILVLEGALAMDT YGPK+LGSFEVFKGDFNIKKIEDGSIFVISYRAPVRS GKLRVHRTECSFSGS+EVLLGCQIEASADYDIDDFNKFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESES+ADPALSTQTVL+QLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMSALFDITNEHIRHVEKIGNGPQSIKVDELR+VKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK+DLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLD ILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGVSVEGFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGF+++IG+NEGVREEKLCGDPWLKVMLFLGQ
Subject   2927  QCDRVVFATTGAGLSKLLDVPRSKKQSILVLEGALAMDTGYGPKVLGSFEVFKGDFNIKKIEDGSIFVISYRAPVRSLGKLRVHRTECSFSGSKEVLLGCQIEASADYDIDDFNKFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESLADPALSTQTVLQQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDVILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGVSVEGFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFSINIGKNEGVREEKLCGDPWLKVMLFLGQ  5137

Range 2: 2927 to 5128 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1386.2 bits(3019) 0.0 596/734(81%) 0/734(0%) Minus/Minus
Query        3  EKHDL*PRITTKLFLSHSFISPNANVEAIKEVGLTGKQVPYHILPTLRRQEVVKWFPSKM*EETLHAYTSNVYQVQIVTKA**GR*PPTIISME*VM*N*NPTMFEVQPR*FTKC*C*LLHTKVRLHNFLFLKA*NQNGI*GGLRPSQKEVMHIVKNGIVSERCSHGALLKMTWQPRLKHWIHKPPALNIIPVGLALK*SQYVTLLSP*YRAVLLGVICALTGVTSK*NESVTSYGQ*TKVNVARRKKLNLIKNHTMACL*IFNLSEKYFKGHNVPTFSL*FACLCHFATIIHFQVFFN*IS*SPPG*NKGHELTFRPLHEALVQKAFACSKSSKHNCQFPRFDI*S*YP*EPWLGIIKFLITYNTS*AS*QTSLQLFSPLKAWKVSYLRSIH*KEVKSRSFHFSQLIHLYALRAIANLLNMSYMFIGYVK*S*HASARINNLDFSINVTLGTNVECFEGLSEVHHVQATTLAQFFKDVICGRSAQIVKDIHLTSAERRGNSGYHAAIQWGTGLKMI*LQAQNST*RPLTISKFPTYLILWGDDDQPHMMPNAE*GYHLVLCISIVTKLLQNSLG*QSWICNGFTFNK*TYASFQSKPVCAQQETH*VPKAVTITRHRKFVKVINVIISRGLNLTTK*YFSRP*KGTFRPVDSQFARRSHRSPVRYYKYGAIFNFLNVEVPFEYLKRSQNLWSIAGIHCKCTFKD*Y*LLLAPRHI*QLR*ACTSCCKDNSVTL  2204
                EKH+ *PRIT +LFLS++FI  N + E IK++ LT KQ+PYHILPTL  QEVVKWFPS+M*EETLHA+ S++YQVQ+V KA**GR*PPTIISME*VM*N N TMFEVQPR*F+KC*  LLHTKVRLHNFL LKA*N N +*G LRP QKE+MHIVKNGI+SE CSHGALL+MTWQ  LKHWIHKPPALN++PVGLALK*SQY+TLL P*Y AVLLGVICAL GVTS+*NESVTSYG  TKVN+A RK+LNLIK+HTMACL*I NLSEK+FKGH+VPT SL* ACLCHFA IIHFQ+ FN*IS*SPPG*NKG+E TFRPLH+AL+QK  A SKS KH+CQFPRFDI*S*YP*+PWLGIIKF +TY+ S*AS*QTSLQLF P KAWKVSYLRSIH +EVKSRS HFSQ IHLYALRA+ NLLNM YMFI YVK S*HASARI+NL+  INVTL TNVE FE LSE+HHVQA TLAQFFK+VIC  SAQIVK+I+ TS +R GNS  HAAIQWGT LK+I*LQAQNST*RPL ISK PT+ I W D+DQPHMMPNAE*GYHLVLCISIVTKLLQNSLG*QSWIC GFTFNK TYA FQSKP+CAQQETH*VPKAVTI R+R+FVKVINVIISRGLNLTTK +F RP KGTFRPVDSQFA+R HRSPVRYYKYGAIFNFLNVEVPFE+LKRSQNLW IA IHC+CTFKD*Y*LLL PRHI*QL *ACTSCCKDNS+TL
Subject   2927  EKHNF*PRITAQLFLSYAFILTNVDAETIKKIWLTWKQIPYHILPTLCSQEVVKWFPSEM*EETLHAHASDIYQVQVVAKA**GR*PPTIISME*VM*NQNSTMFEVQPR*FSKC*RKLLHTKVRLHNFLLLKA*N*NDV*GSLRPGQKEIMHIVKNGIISESCSHGALLEMTWQSGLKHWIHKPPALNVVPVGLALK*SQYITLLGP*YCAVLLGVICALAGVTSE*NESVTSYG*QTKVNIAWRKQLNLIKDHTMACL*ILNLSEKHFKGHDVPTLSL*LACLCHFAAIIHFQISFN*IS*SPPG*NKGYEFTFRPLHKALIQKTLASSKSPKHDCQFPRFDI*S*YP*KPWLGIIKFFVTYHAS*AS*QTSLQLFCPFKAWKVSYLRSIHREEVKSRSLHFSQFIHLYALRAVTNLLNMPYMFISYVKQS*HASARIDNLNLPINVTLSTNVERFESLSEIHHVQAATLAQFFKNVICRGSAQIVKNIYFTSTKR*GNSCDHAAIQWGTWLKVI*LQAQNST*RPLAISKLPTHFIFWSDNDQPHMMPNAE*GYHLVLCISIVTKLLQNSLG*QSWICKGFTFNKRTYAGFQSKPICAQQETH*VPKAVTIARYREFVKVINVIISRGLNLTTKKHFLRPRKGTFRPVDSQFAKRPHRSPVRYYKYGAIFNFLNVEVPFEHLKRSQNLWPIASIHCECTFKD*Y*LLLTPRHI*QLG*ACTSCCKDNSITL  5128

Range 3: 2929 to 5127 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1332.2 bits(2901) 0.0 595/733(81%) 0/733(0%) Plus/Plus
Query        5  V*PSCLCNNWCRLI*VARCA*EQEAINTSP*RCTCNGYQLWTKDFGIF*GIQRGLQH*EN*RWLHICNILQGSCEISWQIESPQDGMFLFRV*RSTTWLSN*GLC*L*H**L*QIFCXXXXXXXXXXSGFLVEHRRACFESWHTFIC*K*IHCRSSSVNPNCFEATW*QCLCRERDDSLILH*ASCEADHHHPRV*GKLEIWR**VAFMWNFVLAIKSFSTLCPIEWLHDNRYCLCARQT*GGCP*LSVQTFHKSHL*RIVPRWWPEHDVPR*GLRSIRHLCQV*H*WRNRGY*S*RTHVSFI*HNQ*TYKTC*EDWQWPAEHKGG*AERSETICS*PPFNEWIEDNLLSKL*EG*KAAGMFARRLNWCYK**EI**FQAMALRDINFKYQISGIDSCAWNFWSRQKLSVQELHEEV*R*VRDLCFTQEGSS*FN*KRPGNG*WLQSGKGRQIKERRLGRCDL*SISQKD*KSKGRPLCDF**GSAFSSWLR*PLSIDHKK*RFHFTCW*PLSKHI*LPKGPRDTRG*AK*HIEIT*GQVLQV*Y*EPEVCESNV*V*AAMSF*EGLHDCSVR*LCHFSQYA*LPSGSV*DLLRCHSGFKL*GKENCAVLLWYEATNTNIW*INGAELQTWWDFNFT*LIPY**S*VVNGPITL*SQFGLGKHYWCKRGGFPLTFCWETTLPLPDGEEWGECDKGLASR*AQLL*WLQR*HWAK*RSARGKALW*SLAKGHAF  2203
                V* SCLCNNWCRLI VARCA*E EAINTSP*RCT NGY LW K FGIF*G+QRGLQH*EN*RWLHICNILQGSCE+SWQIESPQDGMFLF V* S +WLSN*GLC*L*H**L*QI C W W*LLLALSGFLVEHR ACFES HTF+C*K*I CRSSSVNPNCF ATW*QCLCRERDDSLILH*ASCE DH+H R+* +LE+WR* VAFMWNFVLAIKS ST+CPIEWLHD+ YCL A  T*  C *LSVQT +KSH *RIVPRW PEHDV R*G RS+RHLC V*H*W + GY S*RTHVS +*HN *TYK C*EDW  PAEHKGG* E+SE ICS*PP +EWIEDNLLSKL*+G KAAGMFARRLNW  K* +I**FQAMA RDINFKYQISGIDS AW+FWS Q+ SV EL+EEV*R*+R+LCFTQEGSS*FN*KR GNG*WLQSGKGRQ+KER LGR DL*S+SQKD*+SKGRPLCD **GSA SS L *PLS++H K*RFHFT W*PL KHI*LPKGPR+TRG AK*+IEIT*GQVLQV +*EPEVCESNV*V  AMSF EGLHDCS R*LCHFSQYA* PSG V*D LR HS FKL*G+ENCAVLLWYEAT  NIW INGAELQTWW+F+FT*LIPY**S*VVNGPITL* Q GLGK++W +RGGFPLTF WETTLPLPD +EWGECDKG ASR*A+  *W Q  HW +*R  RGKA+ *SL K +AF
Subject   2929  V*SSCLCNNWCRLIQVARCA*E*EAINTSP*RCTRNGYWLWAKGFGIF*GVQRGLQH*EN*RWLHICNILQGSCEVSWQIESPQDGMFLFWV*GSASWLSN*GLC*L*H**L*QILCTWRW*LLLALSGFLVEHRWACFESRHTFVC*K*IPCRSSSVNPNCFAATW*QCLCRERDDSLILH*ASCEVDHYHSRI*SELEVWR*RVAFMWNFVLAIKSLSTMCPIEWLHDHSYCLSAW*T*SRCS*LSVQTLYKSHF*RIVPRWRPEHDVSR*GFRSVRHLC*V*H*WGD*GYQS*RTHVSSV*HN**TYKAC*EDW*RPAEHKGG*TEKSEAICS*PPLDEWIEDNLLSKL*KGRKAAGMFARRLNWRDK*RKI**FQAMAFRDINFKYQISGIDSRAWDFWSWQEFSV*ELYEEV*R*IRNLCFTQEGSS*FN*KRSGNG*WLQSGKGRQVKERGLGRRDL*SVSQKD*ESKGRPLCDL**GSAVSSRLC*PLSVNHTK*RFHFTRW*PLPKHI*LPKGPRNTRGRAK*YIEIT*GQVLQVQH*EPEVCESNV*VQTAMSFQEGLHDCSFR*LCHFSQYA*FPSGPV*DFLRRHSSFKL*GEENCAVLLWYEATYANIWRINGAELQTWWNFDFT*LIPY**S*VVNGPITL*PQLGLGKYHWRERGGFPLTFRWETTLPLPDCKEWGECDKGSASR*AKFF*WFQHQHW*E*RRTRGKAVR*SLVKSYAF  5127

Range 4: 2929 to 4368 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1049.0 bits(2283) 0.0 467/480(97%) 0/480(0%) Minus/Minus
Query        5  ITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRSFLIELARALLGETKVTNLPSDLFMKLLYRKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTSLSSSTFMLCGPLPIFSTCLICSLVMSNKADMRPLGLITSISPLMSHLAQMSNASKASARYIMFRPPPWHNSSKM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHKGHSLSPNFQLTSYSGVMMISLT*CLMQNKAIISFSA*ALSPSCFKTVWVDRAGSAMDSLSTNERMPAFKASPSVLNKKPTECQKQLPSPGTENLLKXXXXXXXXXSI*QPSSTSLDPEKEHSVLWTLNLPGDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKIFGP*LVSIASAPSRTSIDCFLLLGTSSNLDKPAPVVAKTTRSH  1444
                ITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRS LIELARALLGETKVTNLPSDLF+KLLYRKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFT LSSSTFMLCGPLPIFSTCLICSLVMSN+ADMRPLGLITSISPLMSHLAQMSNASKASARYIMFRPPPWHNSSKM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGA G*K*FDCKHKIPHKGHSLSPNFQLTSYSGV+MI+LT*CLMQNKAIISFSA*ALSPSC KTVWVDRAGSA DSLSTNERMPAFKASPSVLNKKPTECQKQLPSPGTENLLKSSMS*SAEASI*QP STSLDPEKEHSVLWTLNLP DLTGAL*DITNMEPSSIFLMLKSPLNTSKDPK FGP* VSIASAPSRTSIDCFLLLGTSSNLDKPAPVVAKTTRSH
Subject   2929  ITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRSLLIELARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTFLSSSTFMLCGPLPIFSTCLICSLVMSNRADMRPLGLITSISPLMSHLAQMSNASKASARYIMFRPPPWHNSSKM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAHG*K*FDCKHKIPHKGHSLSPNFQLTSYSGVIMINLT*CLMQNKAIISFSA*ALSPSCCKTVWVDRAGSARDSLSTNERMPAFKASPSVLNKKPTECQKQLPSPGTENLLKSSMS*SAEASI*QPRSTSLDPEKEHSVLWTLNLPRDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKTFGP*PVSIASAPSRTSIDCFLLLGTSSNLDKPAPVVAKTTRSH  4368

Range 5: 3903 to 5573 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
810.3 bits(1762) 0.0 389/557(70%) 0/557(0%) Plus/Plus
Query      979  WMS*EK*NDLLLTSFQ*MDRR*LTFQALRGLKSCRDVC*EA*LVL*VMRNLMIPSHGSQGYQLQISNLGN*QLCLELLEQAKAFCTRAS*RGLKVSS*PLFHPGGL*LIQLKKTWKWMMVAKWQRQANQREKVGTL*PLKYFSERLKI*RQAIV*FLMRFSFFLLATLTFVY*P*EVTLSFHLLVTPVKAHMTPKRTARY*GLSKVTY*DYLRASPTGIILRAGGL*IQCLSLGCHVILRRAP*LQRSLTMPFFTICMTSFWLGLRPP*MPFWFQALRKRKLCSLTLV*SN*H*HLVNQRG*TSNMVGF*FHMTHSILMIVGG*RPYHALVTIWTW*TLLV*AWRVSSHILLGNHFTTS*RRRVGRM**GTCFPVSPTSLMASTLALGEMKECERKSFVVILG*RSCFS*AKMRIARLRKLSLNARMRNGLKPISH*VIWNQQGPGGLERWH*RNTVK*DVVMKRLNSSLMNIGVEEASN*ATRVKDLKAYIQGIKVTIR*PSSWLSGNV*SFLSLKLKLQN*GAQSHTGSSY*TLSFLRFH*MQATMLT*CMKPYK  2649
                WM+*EK*+DLLLTS +*MDRR*LTFQAL+G KSCRDVC*EA*L  *V +NLMIPSHG QGYQLQISNLGN*Q CL LLE A+ FC RA *RGLKV+S*PLFHPGGL*LIQLK+ WKWMM AKWQRQA+QRE+VGT *PLK FSERL+I*RQAIV* LMRFS FL A LTFV *P EVTLSFH LVTP KAHMTPKRTA+Y*G SKV Y*DYLRASPTG  LRAGGL*IQCLS  CHVI RRAP*LQ SL MPFFTICM SFW GLR P*  F FQALR+RKLCSLTLV*SN  *HL NQRG*TSNMV F*FHMTHSILMIVGG*RPYHAL T WTW*  L *AWRVSSHI LGNHFTTS* +RVGRM**G CF VS   LM S   L  MK  ERKS  VILG*+ CFS* +M+  +L+ L L+ +M+NG K    * IW+Q G  GL +W *++TV+ DV M++L++S MN G   ASN*A  V  L+A+I  I+     P  W SGN *S  S + KL++*G QS  G+S  T S+ + H*+ AT+    M+ ++
Subject   3903  WMN*EK*SDLLLTSSR*MDRR*LTFQALKGQKSCRDVC*EA*LA**VTKNLMIPSHGFQGYQLQISNLGN*QSCLGLLELARVFCIRAL*RGLKVNS*PLFHPGGL*LIQLKEIWKWMMAAKWQRQASQRERVGTS*PLKCFSERLRI*RQAIV*SLMRFSCFLQAMLTFVC*PYEVTLSFHSLVTPAKAHMTPKRTAQY*GPSKVIY*DYLRASPTGTTLRAGGL*IQCLSPDCHVISRRAP*LQLSLIMPFFTICMISFWPGLRLP*TSF*FQALRRRKLCSLTLV*SNLR*HLENQRG*TSNMVEF*FHMTHSILMIVGG*RPYHALATTWTW*ISLA*AWRVSSHISLGNHFTTS*LQRVGRM**GICFQVSQIFLMVSASTLVRMKAYERKSCAVILG*KLCFS*DRMKTVKLKSLKLSVQMKNGSKHTYL*AIWSQPGLDGLGKWP*KSTVRYDVGMRQLSNSSMNTGGGWASN*AMLVNVLRAFILDIRAMTLSPF*WPSGNA*SSQSHRWKLRS*GVQSLMGNSCLTPSYQKSH*VLATIPICSMRQFR  5573

Range 6: 2928 to 4016 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
688.4 bits(1496) 0.0 301/363(83%) 0/363(0%) Minus/Minus
Query        4  ANIPAAFQPSQSLESKLSSIHSLKGGQEQIVSLLSAHPPLCSAGHCQSSQHVLYVHWLCQIKLTCVR*D**PRFLH*CHTWHKCRMLRRPQRGTSCSGHHLGTILQRCDLWKVCTDS*GHPPHVCRAQRQ*RLSCSHSMGHRVENDLIASTKFHIKATHYLQISNLPHTLG***SASHDA*CRIRLSSRSLHKHCHQVASKQFGLTELDLQWIHFQQMNVCQLSKQARLCSTRNPLSAKSSYHHQAQKIC*SHQCHNQQRPQFDNQVVLL*TLKRNIPSCGLSICQEISQEPCKILQIWSHLQFS*C*SPL*IPQKIPKSLVHSWYPLQVHLQGLVLIASCS*AHLAT*ISLHQLLQRQLGHT  1092
                ANIPAAF P QSLESKLSSIHS +GGQEQI SL S HPPLCSAG  QSSQH LYVH LCQ +LTCVR*D**P+  H*CHT HKCR LR+PQR TSCSG HLGTILQ+CDL +VCTDS* H  HV +A RQ*  SCSHSMGH VE+DLIASTKFHIKAT YLQ SN  H L ***S SHDA*CRIRLSSRSLHKHCHQVA+KQFGLTELDLQ IHFQQ NVC+LSKQA LCSTRNPLSAKSSYH Q Q+IC*SHQCHNQQRPQFDNQ  L *T KRNIPSCGLSICQE SQEPCKILQIWSHLQFS*C*SPL* PQKIPK L HS YPL+VHLQGLVLIAS S*AHLAT ISLHQLLQRQL HT
Subject   2928  ANIPAAFLPFQSLESKLSSIHSSRGGQEQIASLFSVHPPLCSAGRYQSSQHALYVH*LCQTELTCVR*D**PQSPH*CHT*HKCRTLRKPQRDTSCSGRHLGTILQKCDL*RVCTDS*EHLLHVYQALRQ*L*SCSHSMGHMVESDLIASTKFHIKATRYLQTSNSLHILE***STSHDA*CRIRLSSRSLHKHCHQVAAKQFGLTELDLQGIHFQQTNVCRLSKQAHLCSTRNPLSAKSSYHRQVQRIC*SHQCHNQQRPQFDNQEALP*TQKRNIPSCGLSICQETSQEPCKILQIWSHLQFS*C*SPL*TPQKIPKPLAHSQYPLRVHLQGLVLIASYS*AHLATWISLHQLLQRQLDHT  4016

Range 7: 4059 to 5561 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
654.5 bits(1422) 0.0 343/501(68%) 0/501(0%) Minus/Minus
Query     1135  HASG*HCGLHSVEP*KGKCLVRTSRMALRASILQLQLEA*KTLDVS*QP*GRLPNRYLYALDICFQIFHTRCSIARFFHTYVHQRTVESFHNHISLHGVPSMPSFQPTWPLLIPDYLMGYGF*TIPHSSIQTQFPQPRNPHLGLRKA*PLAKDHHKAFPLALLHFAQC*R*SH*RSWAHREAXXXXXXXXXXXXXXGKVVSQQNVRGNPPRLHQ*CLPSPNCD*SVIGPLTTYDHQYGMSHVKLKSHHV*SSAPLIHQMLVLVASYQSKTAQFSFPQSLKPEWHLRRS*TEPEGSHAYCEKWHSQRTLQSWSPS*NDMAA*TQTLDSQTSGSQYYTCRTCPQVISICHFAQPLVSRGPFGSHMCFDRGHQQVK*KRHFLWSIDKGQRSQEEKAEPHQKSHNGLPLDFQSF*EILQRSQRXXXXXXXXXXXXXXNHHPFPGLF*LN*LEPSWVKQRSRTYLQTXXXXSCTESFCLLQKFQAQLSIPEI*YLKLISLRAMAWN  2637
                H +  +CG H +    G+C    S  AL A   QL   A +T  VS +P  R  +   Y  D C Q  H  CSIAR     VH+R  E  H HI  HG  S P  QP  P L PD      F*TI H + Q Q  Q  + H  LRKA* L KDH  AFPL  LH  QC* *+H*++ AH EA PLSHSPHS  SGSGKVVSQ+NVRGNPPR  Q* LPSP+C *SVIGPLTTYDHQYGMSHVK K HHV*SSAPLI QML  VASYQSKTAQFS PQSLK E  LR+S*T PEG+HAYCEKWH+QR LQSWSPS*NDMA  TQTLDSQTSGSQ  TCRTCPQVISI HFA+PLV RGPFGSHMCF RGHQ+VK*KRHF+W  DKGQ S EE AEPHQ+SHNGLPLD QSF*E LQRS+RPN LSL CLPLPLC+HHPFP LF*LN*LEPSWVKQR R YLQTSS*SS TE+ C LQK QA+LSIPEI*YLKLISL+AMAWN
Subject   4059  HGTYWYCG*HLMGLLIGRCQAGISHKALHALASQLPPVALRTSSVSGRPSKR**SHCPYV*DKCSQNVHKHCSIARPSPPCVHRRIAELSHTHIVPHGTLSRPFSQPI*PWLTPDCSKVCVF*TILHLNTQLQALQLHSLHPVLRKA*LLTKDHRTAFPLVRLHSYQC*C*NH*KNLAHLEADPLSHSPHSLQSGSGKVVSQRNVRGNPPRSRQ*YLPSPSCG*SVIGPLTTYDHQYGMSHVKSKFHHV*SSAPLILQMLA*VASYQSKTAQFSSPQSLKLE*RLRKS*TGPEGNHAYCEKWHNQRKLQSWSPS*NDMAVWTQTLDSQTSGSQCCTCRTCPQVISIYHFARPLVLRGPFGSHMCFGRGHQRVK*KRHFVWLTDKGQHSLEETAEPHQRSHNGLPLDSQSF*ETLQRSRRPNPLSLTCLPLPLCSHHPFPDLF*LN*LEPSWVKQRLRIYLQTSS*SSYTENSCQLQKSQARLSIPEI*YLKLISLKAMAWN  5561

Range 8: 4408 to 5133 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
525.7 bits(1141) 0.0 227/242(94%) 0/242(0%) Minus/Minus
Query     1484  PKKSMTFSQGSPQSFSSRTPSFRPMLTLKPLKKLGSPGSKSLITFSPLFAVRKW*SGFPAKCERKPSTLTPVMFTKSKL*LKRDRAVNHLRSSVWNESCEIKIPPCLKFSPVDSPNVSVSCFIPK*DCTIFFSSKLETRMASKEVLDRARRKSCIL*KMA*SANAAVMEPFLK*HGSLDSNIGFTNLRLSILYL*DLPSSNLNMSLCSAPSIARSFWESYVL*QGSPASEMKASLLMVNRQR  2209
                PKKS+TF+QGSP SFSSRTPSF PML LKPLKK GSPGS+SLITFSPLFAVRKW*SGFPAKCERKPSTLTPV+FTKSKL LKRDRAVNHLRSSVWNESCEIKIPPCLKFSPVDSPNVSVSCFIPK*DCTIFFSSKLETRM SKEVLDRARRKSCIL*KMA*SA AAVMEPFLK*HGSLDSNIGFTNLRLS+LYL*DLPSSNLN+SLCSAPSIARSFWESYVL QGSPASEMKASL MVNRQR
Subject   4408  PKKSITFNQGSPHSFSSRTPSFLPMLMLKPLKKFGSPGSRSLITFSPLFAVRKW*SGFPAKCERKPSTLTPVIFTKSKLWLKRDRAVNHLRSSVWNESCEIKIPPCLKFSPVDSPNVSVSCFIPK*DCTIFFSSKLETRMTSKEVLDRARRKSCIL*KMA*SAKAAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVLWQGSPASEMKASLRMVNRQR  5133

Range 9: 3162 to 3860 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
382.8 bits(829) 0.0 192/233(82%) 0/233(0%) Plus/Plus
Query      238  AN*ESTGRNVPFQGLEKYYLVVKLRPLLIMTLMTLTNFLCLVMVTAFGTQWVSC*AQTGLL*KLAYVHLLKVNPLQIQLCQPKLF*SNLVTMLMQRTR**PYSALGIM*G*SSSPQSMR*VGNLEIVSGLYVEFCACNQIIFNPVPH*MXXXXXXXXXRSADVRWMSLTICADLPQITSLKNCAKVVA*T*CTSLRPSKHSTFVPSVTLMEKSRLLILADACQLYLT*PMNI*  936
                AN*ESTGRNVPF GL K +LVVKLRPLLIMTLMTLTN L L MVTAFGTQWVSC*AQ GLL*K AYV LLKVNPLQIQLCQPKLF SNLVTMLMQRTR**PYSALGIM*G*S S Q+M+*VG+LEI SGLYVEFCACNQI FN VPH*MAA*  LLP R  DV+ M LTICAD  QIT LKNCAKV A*T*C SLR SK STFV SVTLM + RL ILADACQL LT* MNI*
Subject   3162  AN*ESTGRNVPFLGLRKCFLVVKLRPLLIMTLMTLTNSLYLAMVTAFGTQWVSC*AQMGLL*KPAYVRLLKVNPLQIQLCQPKLFCSNLVTMLMQRTR**PYSALGIM*G*SLSLQNMK*VGSLEIASGLYVEFCACNQITFNHVPH*MAA*SQLLPQRLVDVK*MFLTICADPLQITFLKNCAKVAA*T*CISLRLSKRSTFVLSVTLMGRLRLSILADACQLCLT*LMNI*  3860

Range 10: 5189 to 5575 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
296.2 bits(640) 0.0 120/129(93%) 0/129(0%) Plus/Plus
Query     2265  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMHEAVQE  2651
                WFKTHIPLSNLESTRARWVGKMALKE+REVRCGYETTQQFFDEHR G  EQLSNACERFESIYPRHKGNDS+TFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPL+ASHN N+ HEAVQE
Subject   5189  WFKTHIPLSNLESTRARWVGKMALKEYREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLSASHNTNMFHEAVQE  5575

Range 11: 5188 to 5568 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
212.8 bits(458) 0.0 95/127(75%) 0/127(0%) Minus/Minus
Query     2264  TASCIRLALWLAFSGTLERKVSSKNFPYGFARLNFAAST*GLENFRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNC*VVS*PHLTSRCSFNAIFPTHLALVDSRLLNGIWVLNH  2644
                TAS   L LWLA +GT +RKVSS+NFP GFARL+FAAST G ENF+RF TA++KV ESLPLCLG MLS  S ALLNCS +P LCSSKNC*VVS PH TSR SF AIFPTHLALVDSRLL G+ VLNH
Subject   5188  TASWNILVLWLALNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVIESLPLCLG*MLSKRSQALLNCSPIPPLCSSKNC*VVSYPHRTSRYSFKAIFPTHLALVDSRLLKGMCVLNH  5568

Range 12: 2928 to 3125 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
134.9 bits(288) 0.0 59/66(89%) 0/66(0%) Plus/Plus
Query        4  SVTELSLQQLVQAYLSC*MCLGARSNQY*SLKVHLQWIPAMDQRFWDLLRYSKGTSTLRKLKMAPY  201
                SV ELSLQQLVQAY SC*MCLG RSNQY*SLKVH QWI AM QRFWDLLR SKGTSTLRKLKMAPY
Subject   2928  SVIELSLQQLVQAYPSC*MCLGVRSNQY*SLKVHSQWILAMGQRFWDLLRCSKGTSTLRKLKMAPY  3125

Range 13: 5180 to 5560 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
116.5 bits(248) 0.0 58/127(46%) 0/127(0%) Minus/Minus
Query     2256  MHQVSIVACIQWNLRKESV**ELPVWLCAPQFCSFNLRLRKL*TFPDSHEEGYRIVTFMPWIYAFKSFTRVAQLLASSTPMFIKELLSRFITTSHFTVFLQCHLSNPPGPC*FQIT*WDMGFKPFLI  2636
                M  + IVA   W+   E V  E P+ LC P   SF+L L +L  FPD H++G R++  M  I A K+FT +AQLLA   P+FI+ELLS  I TS+ TV  Q H  NP  P * QI    + F+PF I
Subject   5180  MEHIGIVAST*WDF**EGVKQEFPIRLCTP*LRSFHLWL*ELQAFPDGHQKGDRVIALMSRINALKTFTSIAQLLAHPPPVFIEELLSCLIPTSYLTVLFQGHFPNPSSPG*LQIAQRYVCFEPFFI  5560

Range 14: 5170 to 5379 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.6 bits(128) 0.0 31/70(44%) 0/70(0%) Plus/Plus
Query     2246  *MLE*GMV*NPYPIK*SGINKGQVGWKDGIEGTP*SEMWL*NDSTVL**T*VWKKRAIEQRV*KI*KHIS  2455
                *+ +* MV N +  + SG+N+G +GW++G+E  P*  MW+*++S +L *T     RAIEQ +*  *+H+S
Subject   5170  *VFK*RMVQNTHTFEQSGVNQG*MGWENGLERVP*GTMWV*DNSAILR*TQGGDGRAIEQCL*TF*EHLS  5379

Range 15: 5416 to 5544 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.8 bits(63) 0.0 16/43(37%) 0/43(0%) Plus/Plus
Query     2492  GCQETSKVF*ASS*SCKIEARKAIREVLTRHFPF*GSTECKPQ  2620
                G  ET +V  A+  SC+ +A KA+ E+   H P     +C PQ
Subject   5416  GRPETLEVLKATGGSCEAKACKALWEIPA*HLPIKSPIKC*PQ  5544

Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome

Sequence ID: KR054734.1 Length: 8753 Number of Matches: 16

Range 1: 2926 to 5136 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1712.0 bits(3730) 0.0 705/737(96%) 0/737(0%) Plus/Plus
Query        3  QCDRVVFATTGAGLSKLLDVPRSKKQSILVLEGALAMDTSYGPKILGSFEVFKGDFNIKKIEDGSIFVISYRAPVRSPGKLRVHRTECSFSGSREVLLGCQIEASADYDIDDFNKFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESIADPALSTQTVLKQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMSALFDITNEHIRHVEKIGNGPQSIKVDELREVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGVSVEGFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQ  2213
                QCDRVVFATTGAGLSKLLDVPRSKKQSI+VLEGALA+DTSYGPK+LGSFE+FKGDFNIKKIEDGSIFVISY+APVRS GKLRVH+TECSFSGS+EVLLGCQIEASADYDIDDFNKF VPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESES+ DP+LS QTVL+QL DNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINP GRMSALFDITNEHIRHVEKIGNGPQSIKVDELR+VKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTS+IKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK+DLEMDD CKVAKAGKSK+EGWDVVTFEVFLRKI NLKAGHCVIFDEVQLFPPGY+DLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGG+LISHDSFHTDDRRWLTALSRFSHNLDLVNITG+SVE FLSHFAGKPLYHFLTAKSGENVIRDLLPGEP F+NGF+++IG+NEGVREEKLCGDPWLKVMLFLGQ
Subject   2926  QCDRVVFATTGAGLSKLLDVPRSKKQSIIVLEGALAIDTSYGPKVLGSFELFKGDFNIKKIEDGSIFVISYKAPVRSSGKLRVHKTECSFSGSKEVLLGCQIEASADYDIDDFNKFPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESLVDPSLSAQTVLRQLSDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPGGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSDIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKIANLKAGHCVIFDEVQLFPPGYIDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGVLISHDSFHTDDRRWLTALSRFSHNLDLVNITGISVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPIFYNGFSINIGKNEGVREEKLCGDPWLKVMLFLGQ  5136

Range 2: 2926 to 5127 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1199.3 bits(2611) 0.0 528/734(72%) 0/734(0%) Minus/Minus
Query        3  EKHDL*PRITTKLFLSHSFISPNANVEAIKEVGLTGKQVPYHILPTLRRQEVVKWFPSKM*EETLHAYTSNVYQVQIVTKA**GR*PPTIISME*VM*N*NPTMFEVQPR*FTKC*C*LLHTKVRLHNFLFLKA*NQNGI*GGLRPSQKEVMHIVKNGIVSERCSHGALLKMTWQPRLKHWIHKPPALNIIPVGLALK*SQYVTLLSP*YRAVLLGVICALTGVTSK*NESVTSYGQ*TKVNVARRKKLNLIKNHTMACL*IFNLSEKYFKGHNVPTFSL*FACLCHFATIIHFQVFFN*IS*SPPG*NKGHELTFRPLHEALVQKAFACSKSSKHNCQFPRFDI*S*YP*EPWLGIIKFLITYNTS*AS*QTSLQLFSPLKAWKVSYLRSIH*KEVKSRSFHFSQLIHLYALRAIANLLNMSYMFIGYVK*S*HASARINNLDFSINVTLGTNVECFEGLSEVHHVQATTLAQFFKDVICGRSAQIVKDIHLTSAERRGNSGYHAAIQWGTGLKMI*LQAQNST*RPLTISKFPTYLILWGDDDQPHMMPNAE*GYHLVLCISIVTKLLQNSLG*QSWICNGFTFNK*TYASFQSKPVCAQQETH*VPKAVTITRHRKFVKVINVIISRGLNLTTK*YFSRP*KGTFRPVDSQFARRSHRSPVRYYKYGAIFNFLNVEVPFEYLKRSQNLWSIAGIHCKCTFKD*Y*LLLAPRHI*QLR*ACTSCCKDNSVTL  2204
                EKH+  P +TT+ FL H+FI  N N E I E  LT K +PYHILPT   +EVVKWF SKM*++T HA  SNV+QVQ+V KA *GR PPT+IS+E*VM*N NPTMFEV P *F K *C LLH KVRLHN L LKA*NQN I*GGLRPSQKEVMH+V++ I+S+ CSHGALL+MTWQ  LKHWIHKPP LN++PVGL LK*SQY+TLLS  Y A+LLGVICALTG+TSK NES+TSYG  TKVN+A R++LNLIKN  MACL + N  +K+FKGHNVPTF  *FA LCHFATIIHFQV FN*I *SP G*NKG+E  FRPLH+ALVQKAF  SK +KH+CQ  RFDI S*Y *EPWLGI+K LITY+TS*A *QT LQLFSP K WKVSYL SIH*KEVKSRSFHFSQLIHLYALRA+ANLLNMS M +GYVK*S*HA AR+++L+  I++TL  NV+CFE  SE+HHVQ TTL Q FK VICG  AQ+VK+IH TS ERRG+S  HAAI WGT LKMI*LQA +ST RPL ISK PT+LI WG++DQPHMMPNA+*GYH VLCISI+T+L QN LG*Q WI   FTFN+ TYA FQSKP+C QQETH*+PK VTITR+R+FVKVI+VIISRG +LTT *+F  P KG  R V+SQ ARRSHRS VRY++YGAIFNFLNV+VPFE LKRSQNLWSI G+  K  FK+ Y*LLL PRHI*QL * CT  CK+ SVTL
Subject   2926  EKHNFKPWVTTQFFLPHTFIFANVNAETIVENWLTWK*IPYHILPTFCCKEVVKWFSSKM*KKTFHADASNVHQVQVVAKAR*GRQPPTVISVE*VM*NQNPTMFEV*PC*FAKS*CELLHAKVRLHNLLLLKA*NQNRI*GGLRPSQKEVMHVVEDCIISKCCSHGALLEMTWQSGLKHWIHKPPTLNVVPVGLTLK*SQYITLLSSQYCAILLGVICALTGITSKRNESITSYG*QTKVNIAWREQLNLIKNDAMACLQVCNFPKKHFKGHNVPTFFF*FASLCHFATIIHFQVSFN*IC*SPSG*NKGYEFAFRPLHKALVQKAFTSSKGAKHDCQLSRFDIRS*YS*EPWLGIVKLLITYHTS*AP*QTPLQLFSPFKTWKVSYL*SIH*KEVKSRSFHFSQLIHLYALRAVANLLNMSNMLVGYVK*S*HAPARVDDLNLPIDITLSANVKCFESFSEIHHVQTTTLTQLFKYVICGGPAQVVKNIHFTSTERRGDSCDHAAI*WGTRLKMI*LQA*DSTQRPLAISKLPTHLIFWGNNDQPHMMPNAK*GYHFVLCISIITELPQNGLG*QRWIYKRFTFNERTYACFQSKPICTQQETH*MPKTVTITRYREFVKVIDVIISRGFDLTT**HFLGPRKGALRLVNSQLARRSHRSLVRYHEYGAIFNFLNVKVPFEQLKRSQNLWSITGVDRKRAFKNYY*LLLTPRHI*QLG*TCTRRCKNYSVTL  5127

Range 3: 2928 to 4367 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
992.2 bits(2159) 0.0 446/480(93%) 0/480(0%) Minus/Minus
Query        5  ITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRSFLIELARALLGETKVTNLPSDLFMKLLYRKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTSLSSSTFMLCGPLPIFSTCLICSLVMSNKADMRPLGLITSISPLMSHLAQMSNASKASARYIMFRPPPWHNSSKM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHKGHSLSPNFQLTSYSGVMMISLT*CLMQNKAIISFSA*ALSPSCFKTVWVDRAGSAMDSLSTNERMPAFKASPSVLNKKPTECQKQLPSPGTENLLKXXXXXXXXXSI*QPSSTSLDPEKEHSVLWTLNLPGDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKIFGP*LVSIASAPSRTSIDCFLLLGTSSNLDKPAPVVAKTTRSH  1444
                +TQWPAFRF+IFLRNTSKVTTSQPS FDLPAFATLQ SSIS+S LIE ARALLGETKVTNLPSDLF+KLLYRKLLPAPKVPSTTVNSRDLI EVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFT LSSSTFMLCGPLPIFSTCLICSLVMSN+ADMRP GL+TSISPL+SHLAQMSNASKASARYIMF+PPP H+SS M*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPH+GHSLSPNFQLTSYSGV+MISLT*CLMQNKAIISFSA*ALS SC KTVW D+ GS  DSLST ERMPAFKASPSVLNKKPTECQKQLPSPGT NLLKSSMS*SAEASI*QPSSTSLDPEKEHSVL TLNLP DLTGAL*DITNMEPSSIFLMLKSPLN SKDPK FGP*LVSIASAPSRT IDCFLLLGTSSNLDKPAPVVAKTTRSH
Subject   2928  MTQWPAFRFAIFLRNTSKVTTSQPSFFDLPAFATLQLSSISKSLLIEFARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLISEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTFLSSSTFMLCGPLPIFSTCLICSLVMSNRADMRPPGLMTSISPLISHLAQMSNASKASARYIMFKPPP*HSSSNM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHRGHSLSPNFQLTSYSGVIMISLT*CLMQNKAIISFSA*ALSLSCLKTVWADKDGSTRDSLSTKERMPAFKASPSVLNKKPTECQKQLPSPGTGNLLKSSMS*SAEASI*QPSSTSLDPEKEHSVL*TLNLPEDLTGAL*DITNMEPSSIFLMLKSPLNNSKDPKTFGP*LVSIASAPSRTIIDCFLLLGTSSNLDKPAPVVAKTTRSH  4367

Range 4: 3309 to 5126 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
956.9 bits(2082) 0.0 431/606(71%) 0/606(0%) Plus/Plus
Query      386  SGFLVEHRRACFESWHTFIC*K*IHCRSSSVNPNCFEATW*QCLCRERDDSLILH*ASCEADHHHPRV*GKLEIWR**VAFMWNFVLAIKSFSTLCPIEWLHDNRYCLCARQT*GGCP*LSVQTFHKSHL*RIVPRWWPEHDVPR*GLRSIRHLCQV*H*WRNRGY*S*RTHVSFI*HNQ*TYKTC*EDWQWPAEHKGG*AERSETICS*PPFNEWIEDNLLSKL*EG*KAAGMFARRLNWCYK**EI**FQAMALRDINFKYQISGIDSCAWNFWSRQKLSVQELHEEV*R*VRDLCFTQEGSS*FN*KRPGNG*WLQSGKGRQIKERRLGRCDL*SISQKD*KSKGRPLCDF**GSAFSSWLR*PLSIDHKK*RFHFTCW*PLSKHI*LPKGPRDTRG*AK*HIEIT*GQVLQV*Y*EPEVCESNV*V*AAMSF*EGLHDCSVR*LCHFSQYA*LPSGSV*DLLRCHSGFKL*GKENCAVLLWYEATNTNIW*INGAELQTWWDFNFT*LIPY**S*VVNGPITL*SQFGLGKHYWCKRGGFPLTFCWETTLPLPDGEEWGECDKGLASR*AQLL*WLQR*HWAK*RSARGKALW*SLAKGHAF  2203
                SGFLVE+R ACFES HTF  *K*I CRS  V+PN FEA  * CLCRER+DSLILH*ASCEADH++PR+*G+LE+WR* VA +WN +LA+KSFSTLCPI+WLHD+ Y LCAR T* GC *L VQ  HKSH+*R V RWW EHDV R*  RSI HL  V*+ W + G+   R HVS I*HNQ  Y TC*EDWQ PAEHKGG*AE+SETICS*PPFNEWI+DNLLSK *+G*KAAG+FAR LNWC K**E+* FQAMALR+INF YQIS +DS AW+ WS  KLSVQEL+EEV*R +R+LCFTQ+GSS FN*KR GNG* LQSGKG QIK+RRLGRCDL*S+S ++ K +GRPL  F**GS   S L *PLS++H K* FHF+CW* LSKHI*LPKG R+T  *A+*+IEIT*G VLQV +*E EVCESNV*V  AMSF EGLHDCS+ *LC+  Q+A*LPSGSV*DLLRC  GFKL*G+E+CAVLLW+EAT+TN W IN  +LQTWW F+FT*LIP+** *VV+GPI L* Q GLG+HYW +RG F  TFCW+TTLPLP  ++WGECDKG  SR*A  L W Q *HW K*R   GK +W* +A  +AF
Subject   3309  SGFLVEYRWACFESRHTFFR*K*ISCRSIFVSPNRFEAAQ**CLCRERNDSLILH*ASCEADHYYPRI*GELEVWR*RVASVWNLMLAVKSFSTLCPIKWLHDHSYRLCAR*T*SGCS*LPVQALHKSHI*RAVSRWWFEHDVSR*SFRSI*HLR*V*YQWGD*GHQPWRAHVSSI*HNQRAY*TC*EDWQRPAEHKGG*AEKSETICS*PPFNEWIKDNLLSKF*KG*KAAGVFARGLNWCDK**EV*RFQAMALRNINF*YQISRVDSRAWHLWSW*KLSVQELYEEV*RQIRNLCFTQKGSSKFN*KRLGNG**LQSGKGWQIKKRRLGRCDL*SVS*ENCKPEGRPLRHF**GSTVPSRLY*PLSVNHTK*CFHFSCW*SLSKHI*LPKGSRNTGS*AE*YIEIT*G*VLQVQH*ESEVCESNV*VQTAMSFQEGLHDCSIC*LCNLPQHA*LPSGSV*DLLRCDFGFKL*GEEDCAVLLWHEATHTNFWRINRVKLQTWWGFDFT*LIPH**P*VVDGPIAL*PQLGLGEHYWHQRGKFSFTFCWKTTLPLPYSKKWGECDKGSTSR*ANFLQWFQH*HWQK*RCEGGKTVW*PMA*SYAF  5126

Range 5: 3902 to 5482 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
740.6 bits(1610) 0.0 359/527(68%) 0/527(0%) Plus/Plus
Query      979  WMS*EK*NDLLLTSFQ*MDRR*LTFQALRGLKSCRDVC*EA*LVL*VMRNLMIPSHGSQGYQLQISNLGN*QLCLELLEQAKAFCTRAS*RGLKVSS*PLFHPGGL*LIQLKKTWKWMMVAKWQRQANQREKVGTL*PLKYFSERLKI*RQAIV*FLMRFSFFLLATLTFVY*P*EVTLSFHLLVTPVKAHMTPKRTARY*GLSKVTY*DYLRASPTGIILRAGGL*IQCLSLGCHVILRRAP*LQRSLTMPFFTICMTSFWLGLRPP*MPFWFQALRKRKLCSLTLV*SN*H*HLVNQRG*TSNMVGF*FHMTHSILMIVGG*RPYHALVTIWTW*TLLV*AWRVSSHILLGNHFTTS*RRRVGRM**GTCFPVSPTSLMASTLALGEMKECERKSFVVILG*RSCFS*AKMRIARLRKLSLNARMRNGLKPISH*VIWNQQGPGGLERWH*RNTVK*DVVMKRLNSSLMNIGVEEASN*ATRVKDLKAYIQGIKVTIR*PSSWLSGNV*SFLSLKLKLQN*GAQS  2559
                WMS*EK*NDLLLTSFQ*MD+R*LTFQ L+GLKSCR VC* A*LV *VMR+L IPSHGSQ YQL ISNL +*Q CL  LE  KAFCTRA *RGLK +S*PLFHP GL* IQLK+TWKWM+VAKWQR ANQ++KVGTL*PLK F  +L+ *RQAI  FLMRF+  L A LTFV *P EV LSF LLV PVKAHMTPKR A+Y  LS+V Y*DYLR SPTG  LR GGL*IQCLS  CHVI RRAP*LQ  L M   T CMTSFWLGLRPP*M FWFQALR+R+LCSLTL *SN H* L NQ+G*TSNMVGF*FHMTHS LM VGG*RPY AL T WTW*TLL  AW+V  HILL NHFTTS +++VGRM**G  F VS  S M S L L +MK   RK+ VV  G + CFS*A+M+I +L+ LSL+ +M+NG K    * IW+Q G  G  +W *++TV+    M++L+SS MN     ASN*A  VKDLKA+   I+V I     WLSG+V*SF S K +LQ+*GAQS
Subject   3902  WMS*EK*NDLLLTSFQ*MDQR*LTFQVLKGLKSCRGVC*GA*LV**VMRSLTIPSHGSQEYQLLISNLES*QSCLAPLELVKAFCTRAL*RGLKANS*PLFHPEGL*QIQLKETWKWMIVAKWQRLANQKKKVGTL*PLKCFLGKLQT*RQAIASFLMRFNCSLQAILTFVC*PYEVMLSFLLLVIPVKAHMTPKRIAQYWELSRVIY*DYLRVSPTGTTLRVGGL*IQCLSPDCHVISRRAP*LQHLLIMQSSTTCMTSFWLGLRPP*MRFWFQALRRRRLCSLTLA*SNSH*LLANQQG*TSNMVGF*FHMTHSTLMTVGG*RPYRALATTWTW*TLLASAWKVFFHILLENHFTTSLQQKVGRM**GIYFQVSQFSTMVSALTLAKMKV*GRKNCVVTHGLKLCFS*ARMKIVKLKSLSLSVQMKNGSKHTYP*AIWSQPGLDGSGKWP*KSTVRCVAGMRQLSSSSMNTEGVWASN*AMLVKDLKAFTLDIRVMIPSLF*WLSGSV*SFQSHKWRLQS*GAQS  5482

Range 6: 2927 to 4015 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
604.5 bits(1313) 0.0 265/363(73%) 0/363(0%) Minus/Minus
Query        4  ANIPAAFQPSQSLESKLSSIHSLKGGQEQIVSLLSAHPPLCSAGHCQSSQHVLYVHWLCQIKLTCVR*D**PRFLH*CHTWHKCRMLRRPQRGTSCSGHHLGTILQRCDLWKVCTDS*GHPPHVCRAQRQ*RLSCSHSMGHRVENDLIASTKFHIKATHYLQISNLPHTLG***SASHDA*CRIRLSSRSLHKHCHQVASKQFGLTELDLQWIHFQQMNVCQLSKQARLCSTRNPLSAKSSYHHQAQKIC*SHQCHNQQRPQFDNQVVLL*TLKRNIPSCGLSICQEISQEPCKILQIWSHLQFS*C*SPL*IPQKIPKSLVHSWYPLQVHLQGLVLIASCS*AHLAT*ISLHQLLQRQLGHT  1092
                AN PAAFQP Q+LESKLS IHSLKGGQEQIVSL SAHPPLCSAG CQSSQHV Y  WLCQI+LTC R  **P+  H* HT  KC+MLR+ QR TSCS HHL T LQ CDLW+ CT S* HP HV RAQR+*  SCSH MGH+VENDL AS +FH +AT YLQ SN PH LG***SASHDA*C+IRLS RSLHKH H  ASK+FGLT++DLQ IHFQ+ NVC LSKQA L STRNPL+AK+SYHHQ Q IC*SH+CHNQQR +FDN V L  T KR+ PSC LS CQ+ISQEPCKI +IWSHLQFS*C*SPL*  QKIPK LVH+W   Q  LQ L+LIAS S*AHLAT I+LH  LQ+ LGHT
Subject   2927  ANTPAAFQPFQNLESKLSLIHSLKGGQEQIVSLFSAHPPLCSAGRCQSSQHV*YARWLCQIELTCARQG**PQSPH*YHT*RKCQMLRKLQRDTSCSNHHLDTALQICDLWRACTGS*EHPLHVYRAQRR*L*SCSHLMGHKVENDLTASIRFHTEATRYLQTSNSPHILG***SASHDA*CKIRLSFRSLHKHYH*AASKRFGLTKMDLQEIHFQRKNVCLLSKQAHLYSTRNPLNAKNSYHHQVQGIC*SHRCHNQQRLRFDNLVALPWTQKRSTPSCELSTCQKISQEPCKISRIWSHLQFS*C*SPL*TTQKIPKPLVHNWCRSQARLQELLLIASYS*AHLATWINLHPSLQKLLGHT  4015

Range 7: 4407 to 5135 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
503.3 bits(1092) 0.0 217/243(89%) 0/243(0%) Minus/Minus
Query     1484  WPKKSMTFSQGSPQSFSSRTPSFRPMLTLKPLKKLGSPGSKSLITFSPLFAVRKW*SGFPAKCERKPSTLTPVMFTKSKL*LKRDRAVNHLRSSVWNESCEIKIPPCLKFSPVDSPNVSVSCFIPK*DCTIFFSSKLETRMASKEVLDRARRKSCIL*KMA*SANAAVMEPFLK*HGSLDSNIGFTNLRLSILYL*DLPSSNLNMSLCSAPSIARSFWESYVL*QGSPASEMKASLLMVNRQR  2212
                WPKKS+T S GSP SFSS TPSF PML LKPL K+GSPGS+SLITFSPLFAVRKW*SGFPAKCERK STL PVMFTKSKL LKRDRAVNHLRSSVWNESCEIK PPCLKF+PVDSP VSVSCF+PK*DCTIFFSSKLET++ASKEVLDRARRKSC+L K+A*SANAAVMEPFLK*HGSLDSNIGFTNLRLS+LYL*DLPSSNLN+SLCSAPSIARSFWESYVL*QGSPA EMKASL MVNRQR
Subject   4407  WPKKSITLSHGSPHSFSSLTPSFLPMLMLKPL*KIGSPGSRSLITFSPLFAVRKW*SGFPAKCERKLSTLMPVMFTKSKLWLKRDRAVNHLRSSVWNESCEIKTPPCLKFNPVDSPKVSVSCFMPK*DCTIFFSSKLETKIASKEVLDRARRKSCMLWKIA*SANAAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVL*QGSPAREMKASLRMVNRQR  5135

Range 8: 4058 to 4969 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
429.0 bits(930) 0.0 222/304(73%) 0/304(0%) Minus/Minus
Query     1135  KVVSQQNVRGNPPRLHQ*CLPSPNCD*SVIGPLTTYDHQYGMSHVKLKSHHV*SSAPLIHQMLVLVASYQSKTAQFSFPQSLKPEWHLRRS*TEPEGSHAYCEKWHSQRTLQSWSPS*NDMAA*TQTLDSQTSGSQYYTCRTCPQVISICHFAQPLVSRGPFGSHMCFDRGHQQVK*KRHFLWSIDKGQRSQEEKAEPHQKSHNGLPLDFQSF*EILQRSQRXXXXXXXXXXXXXXNHHPFPGLF*LN*LEPSWVKQRSRTYLQTXXXXSCTESFCLLQKFQAQLSIPEI*YLKLISLRAMAWN  2046
                KVV QQNV+ N PR  Q*C PSP+C *S IGP TTY HQ GMSHVK K HHV*S   LI Q LV VAS QSKTAQ S PQSLKP+ HLRRS*TEPEGSHA C + H+Q+ LQSWSPS*NDMA  TQTLDSQTS SQ  TCRT PQVISI H AQ  V R PFGSHMCFDR HQQ K*K HF+W  DKGQ S E   EPHQK  NGLP   Q  *E LQRSQRPNLL LIC PLPLCN+HPFP LF*LN LEP WVKQR R  LQTSS*SSCTESF  LQ+ QA+LS  EI*Y KLI LRAMAWN
Subject   4058  KVVFQQNVKENFPR*CQ*CSPSPSCG*SAIGPSTTYGHQCGMSHVKSKPHHV*SLTLLIRQKLV*VASCQSKTAQSSSPQSLKPKSHLRRS*TEPEGSHACCGRLHNQQMLQSWSPS*NDMAVWTQTLDSQTSDSQCCTCRTYPQVISIYHSAQLPVLRDPFGSHMCFDRDHQQEK*KHHFVWLTDKGQYSLEGTVEPHQK*RNGLPSGLQFS*ETLQRSQRPNLLFLICQPLPLCNYHPFPSLF*LNLLEPFWVKQRLRICLQTSS*SSCTESFYQLQRCQARLSTLEI*YQKLIFLRAMAWN  4969

Range 9: 3161 to 3862 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
306.7 bits(663) 0.0 161/234(69%) 0/234(0%) Plus/Plus
Query      238  AN*ESTGRNVPFQGLEKYYLVVKLRPLLIMTLMTLTNFLCLVMVTAFGTQWVSC*AQTGLL*KLAYVHLLKVNPLQIQLCQPKLF*SNLVTMLMQRTR**PYSALGIM*G*SSSPQSMR*VGNLEIVSGLYVEFCACNQIIFNPVPH*MXXXXXXXXXRSADVRWMSLTICADLPQITSLKNCAKVVA*T*CTSLRPSKHSTFVPSVTLMEKSRLLILADACQLYLT*PMNI*D  939
                A+*E T R+ PF G  K Y VVK +PLLIMT MTLTN L LVMVT FG QWVSC* Q GLL*K AYV  LKVN L I LCQPK F* + V MLMQRT+**PY ALGIM*G*S  PQ+MR*VG+LEI SGL VE  AC+QIIFN VPH*MAA*  L PLRS DV+WM LT CA  PQIT LK+C KVV *T*C SL+ SKH TF  SV  M + R   LA ACQLYLT*P +I D
Subject   3161  AS*EFTRRSAPFLGPRKCY*VVKSKPLLIMTSMTLTNSLYLVMVTVFGIQWVSC*VQMGLL*KQAYVLSLKVNLL*IHLCQPKPF*GSSVIMLMQRTK**PYFALGIM*G*SLLPQNMR*VGSLEIASGLCVESYACSQIIFNLVPH*MAA*SQLSPLRSVDVKWMFLTTCAGPPQITYLKSCVKVVV*T*CISLKLSKHLTFALSVISMGRLRSSTLAGACQLYLT*PTSILD  3862

Range 10: 5188 to 5574 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
298.0 bits(644) 0.0 121/129(94%) 0/129(0%) Plus/Plus
Query     2265  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMHEAVQE  2651
                WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHR G  EQLSNACERFESIYPRHKGNDS+TFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHN N+ +EAVQE
Subject   5188  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVNMFNEAVQE  5574

Range 11: 5187 to 5567 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
219.2 bits(472) 0.0 96/127(76%) 0/127(0%) Minus/Minus
Query     2264  TASCIRLALWLAFSGTLERKVSSKNFPYGFARLNFAAST*GLENFRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNC*VVS*PHLTSRCSFNAIFPTHLALVDSRLLNGIWVLNH  2644
                TAS   L LWLAF+GT ++ VSS+NFP GFARL+FAAST G ENF+RF TA++KV ESLPLCLG MLSNLS ALLNCS +P LCSSKNC*VVS P  TSRCSF AIFPTHLALVDSRLL G+ VLNH
Subject   5187  TASLNILTLWLAFNGTFDKNVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSNLSQALLNCSPIPPLCSSKNC*VVSYPQRTSRCSFKAIFPTHLALVDSRLLKGMCVLNH  5567

Range 12: 2928 to 3278 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
173.8 bits(373) 0.0 83/117(71%) 0/117(0%) Plus/Plus
Query        5  V*PSCLCNNWCRLI*VARCA*EQEAINTSP*RCTCNGYQLWTKDFGIF*GIQRGLQH*EN*RWLHICNILQGSCEISWQIESPQDGMFLFRV*RSTTWLSN*GLC*L*H**L*QIFC  355
                V*PS  CN+ CR I VARCA*E EAIN S *R  C+ +QLWTK FGIF* +QRGL H*EN*RWLHI +ILQGSCEI WQ+ES QDG+ LF V  S T LSN  LC*L*H *L*QI C
Subject   2928  V*PSSFCNDGCRFIQVARCA*E*EAINNSS*RRACDRHQLWTKGFGIF*VVQRGL*H*EN*RWLHIRDILQGSCEIFWQVESSQDGVLLFWVQGSATRLSNRSLC*L*HR*L*QIPC  3278

Range 13: 5018 to 5560 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
149.1 bits(319) 0.0 85/181(47%) 0/181(0%) Minus/Minus
Query     2095  HASG*HCGLHSVEP*KGKCLVRTSRMALRASILQLQLEA*KTLDVS*QP*GRLPNRYLYALDICFQIFHTRCSIARFFHTYVHQRTVESFHNHISLHGVPSMPSFQPTWPLLIPDYLMGYGF*TIPHSSIQTQFPQPRNPHLGLRKA*PLAKDHHKAFPLALLHFAQC*R*SH*RSWAHRE  2637
                H + *HCG HS+E     C       ALRA  LQ  L A KTL+ S QP  +  N Y Y    CFQIFH  C IAR +   VH+RT E  H   + HG  S P  +P  P L PD      F*TI H + QTQ  Q  N H GLRKA*  A  HH  FP + LHF QC* *+H R  AH E
Subject   5018  H*TY*HCG*HSMELLTKMCQAEIFHKALRALALQPPLVALKTLNASGQPLKK*WNHYPYV*GKCFQIFHKHCLIARPYPLCVHRRTAELSHTRNAPHGALSRPFSRPI*PWLTPDCSRVCVF*TILHLNTQTQALQLHNLHPGLRKA*L*AMGHHTVFPPSHLHFCQC*C*NHCRKLAHLE  5560

Range 14: 5179 to 5559 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
116.1 bits(247) 0.0 58/127(46%) 0/127(0%) Minus/Minus
Query     2256  MHQVSIVACIQWNLRKESV**ELPVWLCAPQFCSFNLRLRKL*TFPDSHEEGYRIVTFMPWIYAFKSFTRVAQLLASSTPMFIKELLSRFITTSHFTVFLQCHLSNPPGPC*FQIT*WDMGFKPFLI  2636
                +  + IVA IQWN  ++ V  +  + LCAP  CS +L L KL*T PDSH +   I+T M  + AFKSFT +A LLA +  +FI+ELLS  I  +H TV  Q H  +P  P * QI    + F+PF I
Subject   5179  IEHIDIVASIQWNF*QKCVKQKFSIRLCAP*LCSLHLWL*KL*TLPDSH*KSDGIITLMSRVNAFKSFTSIA*LLAHTPSVFIEELLSCLIPATHLTVLFQGHFPDPSSPG*LQIAQGYVCFEPFFI  5559

Range 15: 2927 to 3124 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
104.2 bits(221) 0.0 48/66(73%) 0/66(0%) Plus/Plus
Query        4  SVTELSLQQLVQAYLSC*MCLGARSNQY*SLKVHLQWIPAMDQRFWDLLRYSKGTSTLRKLKMAPY  201
                SVTE  LQ+ VQ Y SC*MCLG RSNQ * LK  L+  P MDQRFWDLL  SKGT TLRKLKMAPY
Subject   2927  SVTE*FLQRRVQVYPSC*MCLGVRSNQ**FLKARLRSTPVMDQRFWDLLSCSKGTLTLRKLKMAPY  3124

Range 16: 5163 to 5546 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
93.6 bits(198) 0.0 56/128(44%) 0/128(0%) Plus/Plus
Query     2240  *V*MLE*GMV*NPYPIK*SGINKGQVGWKDGIEGTP*SEMWL*NDSTVL**T*VWKKRAIEQRV*KI*KHISKA*R*RFGNLPHGCQETSKVF*ASS*SCKIEARKAIREVLTRHFPF*GSTECKPQC  2623
                *V*+ +* MV N + ++ SG+N+G +G ++G+E  P*  + +*++S VL *T     RAI+Q +*KI*KH+   * * F +  +GC E  KVF A+S  CK +ARKA+ ++   H     S EC PQC
Subject   5163  *V*VFK*RMVQNTHTLEQSGVNQG*MGRENGLERAP*GALRV*DNSAVLR*TQRGYGRAIKQCL*KI*KHLP*T*G**FHHFFNGCPEAFKVFKATSGGCKAKARKALWKISA*HIFVKSSIEC*PQC  5546

Rupestris stem pitting associated virus isolate RSPaV PN, complete genome

Sequence ID: AY368172.2 Length: 8743 Number of Matches: 14

Range 1: 2926 to 5136 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1657.5 bits(3611) 0.0 685/737(93%) 0/737(0%) Plus/Plus
Query        3  QCDRVVFATTGAGLSKLLDVPRSKKQSILVLEGALAMDTSYGPKILGSFEVFKGDFNIKKIEDGSIFVISYRAPVRSPGKLRVHRTECSFSGSREVLLGCQIEASADYDIDDFNKFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESIADPALSTQTVLKQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMSALFDITNEHIRHVEKIGNGPQSIKVDELREVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGVSVEGFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQ  2213
                QCD+VVFATTGAGLSKLLD+PRSKKQSILVLEGAL MDTSYGPK+LGSFEVFKGDF++KKIEDGSIFVISYRAPVRSPGKLRVH+TECSFSGSREVLLGCQIEASADYDIDDFNKFSVP DGNCFWHSVGFLLSTDGLALKAGIRSFVESES+AD +LS+  VLKQLG++AYAENEMIALFCIRH VRLIIITPEYEVSWKFG+SEWPLCGILCL+SNHFQPCAPLNGCMITAIA+ALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIE+INP GR+SALFDITNEHI HVEKIG GPQSIKVDELR+VKRSALDLLSMNGS+ITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLS IST +IK RELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK+DLEMDD CKVAKAGKSK+EGWDVVTFEVFLRKI +LKAGHCVIFDEVQLFPPGY+DLCLLTIR+DAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEG+SY+YNIESRRFVNPMFE RLPCHFKKGSMTAAFADYAIFHNMHDFLLARSK+ LDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFK+GGILISHDSFH DDRRWLTALSRFSHNLDLVNITGVSVE FLS FAGKPLYHFLTAKSGENVIRDLLPGEP FFNGF+++IGRNEGVREEKL GDPWLKVMLFLGQ
Subject   2926  QCDKVVFATTGAGLSKLLDMPRSKKQSILVLEGALEMDTSYGPKVLGSFEVFKGDFSLKKIEDGSIFVISYRAPVRSPGKLRVHKTECSFSGSREVLLGCQIEASADYDIDDFNKFSVPRDGNCFWHSVGFLLSTDGLALKAGIRSFVESESLADSSLSSPAVLKQLGEDAYAENEMIALFCIRHQVRLIIITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIAAALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEIINPGGRISALFDITNEHIMHVEKIGTGPQSIKVDELRKVKRSALDLLSMNGSRITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSSISTVDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKIASLKAGHCVIFDEVQLFPPGYIDLCLLTIRNDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGRSYKYNIESRRFVNPMFECRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKSPLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKNGGILISHDSFHADDRRWLTALSRFSHNLDLVNITGVSVESFLSQFAGKPLYHFLTAKSGENVIRDLLPGEPIFFNGFSINIGRNEGVREEKLYGDPWLKVMLFLGQ  5136

Range 2: 2926 to 5127 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
993.5 bits(2162) 0.0 444/734(60%) 0/734(0%) Minus/Minus
Query        3  EKHDL*PRITTKLFLSHSFISPNANVEAIKEVGLTGKQVPYHILPTLRRQEVVKWFPSKM*EETLHAYTSNVYQVQIVTKA**GR*PPTIISME*VM*N*NPTMFEVQPR*FTKC*C*LLHTKVRLHNFLFLKA*NQNGI*GGLRPSQKEVMHIVKNGIVSERCSHGALLKMTWQPRLKHWIHKPPALNIIPVGLALK*SQYVTLLSP*YRAVLLGVICALTGVTSK*NESVTSYGQ*TKVNVARRKKLNLIKNHTMACL*IFNLSEKYFKGHNVPTFSL*FACLCHFATIIHFQVFFN*IS*SPPG*NKGHELTFRPLHEALVQKAFACSKSSKHNCQFPRFDI*S*YP*EPWLGIIKFLITYNTS*AS*QTSLQLFSPLKAWKVSYLRSIH*KEVKSRSFHFSQLIHLYALRAIANLLNMSYMFIGYVK*S*HASARINNLDFSINVTLGTNVECFEGLSEVHHVQATTLAQFFKDVICGRSAQIVKDIHLTSAERRGNSGYHAAIQWGTGLKMI*LQAQNST*RPLTISKFPTYLILWGDDDQPHMMPNAE*GYHLVLCISIVTKLLQNSLG*QSWICNGFTFNK*TYASFQSKPVCAQQETH*VPKAVTITRHRKFVKVINVIISRGLNLTTK*YFSRP*KGTFRPVDSQFARRSHRSPVRYYKYGAIFNFLNVEVPFEYLKRSQNLWSIAGIHCKCTFKD*Y*LLLAPRHI*QLR*ACTSCCKDNSVTL  2204
                ++H+  PR+T +LFL ++FIS N N E IKE  LT KQ+PYHIL  L   EVVKWFPSK+ ++T H YTSN+YQV I+TKA*    PP II +E*VM*N*NP + E+   *  KC C LLH +V L++ L  KA*NQNGI*G LRPS +EVMH+V+NGI+ + CSHGALL+MTWQ   KHWI KPPALN+I V  A K SQY+TL SP Y A+LLGV+CAL GVT K*N+ +  Y Q T++NVARR+ LNLIKN+TM C *  NL E+  KG+N+PTF L* A LCH ATIIHFQV FN +S*S PG NK H+ TFR LHE LVQ+ FAC KS+KHNC F   DI S*Y *EPWL IIKF ITY+TS*A  Q  LQLFSP K W+VSY   IH*KEVKS  FHFSQL+HLYALR   NL NM Y+FIGYVK* *+AS RI + +F I++T   N+ECFEGLS VHH++AT+L   F++VICG  A +VK+IHLTS +R  N   HAA+QWGT L+MI* QAQN+  RPL   K PTY I  GD++QPH++PN + GYHL+LCISI TKLL N    Q  I  G TFNK  Y SF S+P+ A QETH VP+A+ +T +RKF++VINVIISR  +L TK +F    K TFR VDSQF R SHR  +RY+KY  IFN L  +V F+ LKR Q+LW +  IH KCTFKD  *L L  RHI +   ACTS CK++ + L
Subject   2926  KEHNFQPRVTIQLFLPNTFISSNINAETIKENWLTRKQIPYHILSALCC*EVVKWFPSKLGQKTFHTYTSNIYQV*IMTKA*QSCQPPAIIGVE*VM*N*NPAILEI*AS*LAKCKCELLHAEVGLYDLLLFKA*NQNGI*GRLRPS*EEVMHVVENGIIGKCCSHGALLEMTWQSAFKHWIDKPPALNVILVRSAFKQSQYITLFSPQYCAILLGVVCALAGVTGK*NKGIIPYCQQTQINVARRE*LNLIKNYTMTCF*ACNLPEEDLKGYNIPTFLL*LASLCHLATIIHFQVSFNGVS*SSPGRNKSHKFTFRSLHETLVQETFACPKSAKHNC*FSGLDIHS*YT*EPWL*IIKFFITYHTS*APQQAPLQLFSPFKTWEVSYP*PIH*KEVKS*PFHFSQLVHLYALRTGTNLFNMHYVFIGYVK*G*YASTRIYDFNFPIDITFSANIECFEGLS*VHHIEATSLT*LFENVICGGPA*VVKNIHLTSTKRGSNGCDHAAVQWGTRLEMI*FQAQNAAQRPLAFPKLPTYFIFRGDNNQPHLVPNTKQGYHLILCISIFTKLL*NCWRGQR*IRKGLTFNKRPYTSF*SEPIRA*QETHRVPEAIAVTGYRKFIEVINVIISRSFDLATKQHFPGSRKRTFRFVDSQFTRGSHRGSIRYHKYRTIFNLLEAKVSFKNLKRPQDLWPVTCIHLKCTFKDEN*LFLTSRHIQKFGQACTSGCKNDLIAL  5127

Range 3: 2928 to 4367 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
908.8 bits(1977) 0.0 410/480(85%) 0/480(0%) Minus/Minus
Query        5  ITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRSFLIELARALLGETKVTNLPSDLFMKLLYRKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTSLSSSTFMLCGPLPIFSTCLICSLVMSNKADMRPLGLITSISPLMSHLAQMSNASKASARYIMFRPPPWHNSSKM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHKGHSLSPNFQLTSYSGVMMISLT*CLMQNKAIISFSA*ALSPSCFKTVWVDRAGSAMDSLSTNERMPAFKASPSVLNKKPTECQKQLPSPGTENLLKXXXXXXXXXSI*QPSSTSLDPEKEHSVLWTLNLPGDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKIFGP*LVSIASAPSRTSIDCFLLLGTSSNLDKPAPVVAKTTRSH  1444
                ITQ PAF+ +IFLR TSKVTTSQPS FDLPAFATLQ SSIS+S L+ELARALLGETKVTNLPSDLFMKLLY+KLLPAPKVPSTTVNSR LI  VDI ESHG ESLNFSSLITPV+PP+KHPC+FSALSKLGK*VI DPFIERRSRAD FT LSSSTFMLCGP+PIFSTC++CSLVMSNKADMRP G + SISPL+SHLAQ+SNASKASARYI+ RPPP H+SSKM*FVEGLHR*LRTSTSRLPSA A+AVIMQPFNGAQG K*FD KH++PHKGHSLSPNFQLTSYSGV++I+LT CL+QNKAIISFSA*A SPSCFKT   D+  SA DSLST +R+PAFKASPSVLN+KPTECQKQLPS GTENLLKSSMS*SAEASI QPSSTSLDPEKEHSVLWTLNLPGDLTGAL*DITN+EPSSIFL LKSPL TSKDPK FGP*LVSI+SAPSRT IDCFLLLG S +LDKPAPVVAKTT SH
Subject   2928  ITQ*PAFKLAIFLRKTSKVTTSQPSFFDLPAFATLQLSSISKSLLMELARALLGETKVTNLPSDLFMKLLYKKLLPAPKVPSTTVNSRGLISTVDILESHGFESLNFSSLITPVRPPNKHPCNFSALSKLGK*VILDPFIERRSRADLFTFLSSSTFMLCGPVPIFSTCIMCSLVMSNKADMRPPGFMISISPLISHLAQISNASKASARYIILRPPP*HSSSKM*FVEGLHR*LRTSTSRLPSAAAMAVIMQPFNGAQGWK*FDFKHRMPHKGHSLSPNFQLTSYSGVIIINLTWCLIQNKAIISFSA*ASSPSCFKTAGEDKDESARDSLSTKDRIPAFKASPSVLNRKPTECQKQLPSRGTENLLKSSMS*SAEASIWQPSSTSLDPEKEHSVLWTLNLPGDLTGAL*DITNIEPSSIFLRLKSPLKTSKDPKTFGP*LVSISSAPSRTRIDCFLLLGISRSLDKPAPVVAKTTLSH  4367

Range 4: 4407 to 5132 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
471.6 bits(1023) 0.0 204/242(84%) 0/242(0%) Minus/Minus
Query     1484  PKKSMTFSQGSPQSFSSRTPSFRPMLTLKPLKKLGSPGSKSLITFSPLFAVRKW*SGFPAKCERKPSTLTPVMFTKSKL*LKRDRAVNHLRSSVWNESCEIKIPPCLKFSPVDSPNVSVSCFIPK*DCTIFFSSKLETRMASKEVLDRARRKSCIL*KMA*SANAAVMEPFLK*HGSLDSNIGFTNLRLSILYL*DLPSSNLNMSLCSAPSIARSFWESYVL*QGSPASEMKASLLMVNRQR  2209
                PKKS+TF+QGSP +FSSRTPSF P+L LKPLKK+GSPGS+SLITFSPLFAVRKW*SGFPA  +RK STLTPV+FTKSKL*LKRD+AVNHLRSS WNESCEIKIPP LKF PVDSPNVSVSCF+PK*DCTIFFSSKLET+MASK  LDRARRKSC+L KMA*SANAAVMEPFLK*HGSL SNIG TNL LS+LYL*DLPSSNLN+SLCSAP+IARSFWESYVL QGSPASE+KAS  +V++ R
Subject   4407  PKKSITFNQGSPYNFSSRTPSFLPILMLKPLKKIGSPGSRSLITFSPLFAVRKW*SGFPANWDRKLSTLTPVIFTKSKL*LKRDKAVNHLRSSAWNESCEIKIPPFLKFKPVDSPNVSVSCFMPK*DCTIFFSSKLETKMASKGDLDRARRKSCMLWKMA*SANAAVMEPFLK*HGSLHSNIGLTNLLLSMLYL*DLPSSNLNISLCSAPNIARSFWESYVLWQGSPASEIKASFRIVSKHR  5132

Range 5: 5188 to 5574 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
292.5 bits(632) 0.0 119/129(92%) 0/129(0%) Plus/Plus
Query     2265  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMHEAVQE  2651
                WFKTHIPLSNLESTRARWVGKMALKE+RE RCGYETTQQFFDEHR G  EQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLD FLSKVPLNA HN N+ HEAVQE
Subject   5188  WFKTHIPLSNLESTRARWVGKMALKENREARCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDAFLSKVPLNAGHNVNMFHEAVQE  5574

Range 6: 5187 to 5567 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
210.0 bits(452) 0.0 93/127(73%) 0/127(0%) Minus/Minus
Query     2264  TASCIRLALWLAFSGTLERKVSSKNFPYGFARLNFAAST*GLENFRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNC*VVS*PHLTSRCSFNAIFPTHLALVDSRLLNGIWVLNH  2644
                TAS   L LW AF GT ++  SSKNFP GFARLNFAAST GLENF+RF TA++ VTES PLCLG MLSNLS ALLNCS +P LCSSKNC VVS PHL SR SF AI PTHLALVDS+LL G+ VLNH
Subject   5187  TAS*NMLTLWPAFKGTFDKNASSKNFP*GFARLNFAASTCGLENFKRFRTAIKNVTESFPLCLG*MLSNLSQALLNCSPIPPLCSSKNCWVVSYPHLASRFSFKAILPTHLALVDSKLLKGMCVLNH  5567

Range 7: 5179 to 5559 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
134.9 bits(288) 0.0 63/127(50%) 0/127(0%) Minus/Minus
Query     2256  MHQVSIVACIQWNLRKESV**ELPVWLCAPQFCSFNLRLRKL*TFPDSHEEGYRIVTFMPWIYAFKSFTRVAQLLASSTPMFIKELLSRFITTSHFTVFLQCHLSNPPGPC*FQIT*WDMGFKPFLI  2636
                M  V IVA IQ  L +E V  +  +  C PQ C FNL LRK *T  D H+E  RI++ MP + A KSFT +AQLLA ++P+ IKELL   I T   T+F Q H ++PP  C*FQ+ *  + FKPF I
Subject   5179  MKHVDIVASIQRYL*QECVKQKFSIRFCTPQLCRFNLWLRKF*TLSDCHQECDRIISLMPRVNALKSFTSIAQLLAHTSPVLIKELLGCLIPTPCLTIFFQSHFADPPSSC*FQVA*GYVCFKPFFI  5559

Range 8: 2946 to 5123 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
880.8 bits(1916) 0.0 422/726(58%) 0/726(0%) Plus/Plus
Query       23  CNNWCRLI*VARCA*EQEAINTSP*RCTCNGYQLWTKDFGIF*GIQRGLQH*EN*RWLHICNILQGSCEISWQIESPQDGMFLFRV*RSTTWLSN*GLC*L*H**L*QIFCXXXXXXXXXXSGFLVEHRRACFESWHTFIC*K*IHCRSSSVNPNCFEATW*QCLCRERDDSLILH*ASCEADHHHPRV*GKLEIWR**VAFMWNFVLAIKSFSTLCPIEWLHDNRYCLCARQT*GGCP*LSVQTFHKSHL*RIVPRWWPEHDVPR*GLRSIRHLCQV*H*WRNRGY*S*RTHVSFI*HNQ*TYKTC*EDWQWPAEHKGG*AERSETICS*PPFNEWIEDNLLSKL*EG*KAAGMFARRLNWCYK**EI**FQAMALRDINFKYQISGIDSCAWNFWSRQKLSVQELHEEV*R*VRDLCFTQEGSS*FN*KRPGNG*WLQSGKGRQIKERRLGRCDL*SISQKD*KSKGRPLCDF**GSAFSSWLR*PLSIDHKK*RFHFTCW*PLSKHI*LPKGPRDTRG*AK*HIEIT*GQVLQV*Y*EPEVCESNV*V*AAMSF*EGLHDCSVR*LCHFSQYA*LPSGSV*DLLRCHSGFKL*GKENCAVLLWYEATNTNIW*INGAELQTWWDFNFT*LIPY**S*VVNGPITL*SQFGLGKHYWCKRGGFPLTFCWETTLPLPDGEEWGECDKGLASR*AQLL*WLQR*HWAK*RSARGKALW*SLAKGHA  2200
                CN+WCRL+  +  A*+ E IN+ P*RCT +GY+L  K  G+F*G  R L   E+*RW +IC+IL   CEI   IESPQ+GMF F +  S  WL N   C*L*H**L  IFC  *  LLLAL GF V+H  A F+SW+T  C*K*+ C    V  + F+ATW*+CLCRE DDSL+L+*A  E D++HP +* KLE+W   VAF+ + VL IKSF TLCPIE LHD+ +C  A  T*GGC *L +Q  HKSH  R +   WP++DVP *GLRSIR+L  +*+ W N  + S  TH+S I*HNQ*T+  C*+DW   A+HKGG AE+SE + S*PPFNEW++DNLL K *+G*K A +     NWC K**+I**F+AMAL+ IN  YQ   I+SCAW+FW RQK  VQE HEE+*R*+ D CF QE SS* +*KR GNG* LQ GKG Q+KE RLG C+L* + Q+D K K R LC+F**GS   SWL * +  D+ +*  +FTC *PL KHI LP+G R+  G* K*+IEI * Q+LQV*+*E EVC+SNV*+  AMSF EGLHDCS+  LCHF Q+A*LP  SV*  LRCH GFKL* +E+  +LL +EA +T IW +N  + Q W DFNFT*LIP  *S VV+  +TL*S F LGK+YWCK G F +  CWETTLPLP+ +E  ECDKG AS *A  L*W Q *+W K*R + GK +W* L + +A
Subject   2946  CNHWCRLVQTSGYA*K*ETINSRP*RCT*DGYKLRAKGLGVF*GF*RRL*PQED*RWFYICDIL*SPCEIPG*IESPQNGMFFFWIQGSAAWLPNRSFC*L*H**LQ*IFCTP*RQLLLALCGFPVKHGWARFKSWYTVFC*K*VPCGFIFVLSSSFKATW*RCLCRE*DDSLVLY*APSEVDYYHP*I*SKLEVWGKRVAFVRHSVLEIKSFPTLCPIERLHDHSHCCRAW*T*GGCS*LPMQALHKSHFRRAMSGRWPQYDVPS*GLRSIRYLR*M*YQWGN*NHKSWWTHISLI*HNQ*THNAC*KDWYRSAKHKGGRAEKSEKVSS*PPFNEWVKDNLLPKF*KG*KVARVLVGGPNWCDK**KI**FKAMALKYINCGYQAPRINSCAWHFWGRQKFLVQEFHEEI*R*ICDFCFAQESSS*LH*KRLGNG**LQGGKGWQVKEGRLGCCNL*GLPQEDCKLKSRSLCNF**GSTIPSWLH*SVFADNTE*CLYFTCR*PLPKHIRLPEGSRNIGG*TK*YIEIA*RQILQV*H*EQEVCQSNV*MQTAMSFQEGLHDCSICRLCHFPQHA*LPPSSV*VSLRCHFGFKL*REEDRTILLRHEAAHTYIWRVNWLKFQEWRDFNFT*LIPRR*SQVVDSFVTL*S*FRLGKYYWCKCGKFSVPICWETTLPLPNSKERRECDKGSASW*ANFL*WFQH*YWKK*RCSGGKVVW*PLVESYA  5123

Range 9: 5163 to 5546 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
86.8 bits(183) 0.0 54/128(42%) 0/128(0%) Plus/Plus
Query     2240  *V*MLE*GMV*NPYPIK*SGINKGQVGWKDGIEGTP*SEMWL*NDSTVL**T*VWKKRAIEQRV*KI*KHISKA*R*RFGNLPHGCQETSKVF*ASS*SCKIEARKAIREVLTRHFPF*GSTECKPQC  2623
                *V*M +* MV*N + +K  GINK  VG ++G E   * ++W+*++  +L**      RA+EQ +*KI*+H+  A*   F ++  G  +  K+F*A+S*S K+EA K + ++        G+ EC PQC
Subject   5163  *V*MFK*RMV*NTHTLKQLGINKS*VGRQNGFERKS*GKVWV*DNPAIL**AQGRYGRAVEQCL*KI*EHLP*A*GK*FCHILDGSPKAFKIF*ATS*SGKVEACKTLWKIFA*RILVKGTFECWPQC  5546

Range 10: 3902 to 5572 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
625.1 bits(1358) 0.0 326/557(59%) 0/557(0%) Plus/Plus
Query      979  WMS*EK*NDLLLTSFQ*MDRR*LTFQALRGLKSCRDVC*EA*LVL*VMRNLMIPSHGSQGYQLQISNLGN*QLCLELLEQAKAFCTRAS*RGLKVSS*PLFHPGGL*LIQLKKTWKWMMVAKWQRQANQREKVGTL*PLKYFSERLKI*RQAIV*FLMRFSFFLLATLTFVY*P*EVTLSFHLLVTPVKAHMTPKRTARY*GLSKVTY*DYLRASPTGIILRAGGL*IQCLSLGCHVILRRAP*LQRSLTMPFFTICMTSFWLGLRPP*MPFWFQALRKRKLCSLTLV*SN*H*HLVNQRG*TSNMVGF*FHMTHSILMIVGG*RPYHALVTIWTW*TLLV*AWRVSSHILLGNHFTTS*RRRVGRM**GTCFPVSPTSLMASTLALGEMKECERKSFVVILG*RSCFS*AKMRIARLRKLSLNARMRNGLKPISH*VIWNQQGPGGLERWH*RNTVK*DVVMKRLNSSLMNIGVEEASN*ATRVKDLKAYIQGIKVTIR*PSSWLSGNV*SFLSLKLKLQN*GAQSHTGSSY*TLSFLRFH*MQATMLT*CMKPYK  2649
                W S*EK*   LLTSFQ*M + *LT Q L+GLKSC+  C  A*LV *VM+NLMI SHGSQ YQL IS+  N*QLCL LL QAK  CTR S*R LKV+ * LF PG L*L  LK+TWKWM+VA+WQR A+QR KVG L*PL+  S RL+ *+Q IV*FLMRF++ LLATL  V *   +   FHL VTP KAH TP+R A+Y GL+KV Y*D L+A  T I LRAGGL IQCL+  CHVI RRAP*LQ    MPF T CMTS  LGL  P*MPFWFQAL++R+  + T  *S+ H HL +Q  * S M GF*FHMTHS  MI GG*+  HALV I TW* LLV* W+V    LLGNHFTTS*++R  RM**G CF VS  SLM S L L EMK   RKS +V LG*+ C    +M+I +LR LSLN +M+NGLK    *  WNQQ  GG  +W *+  V+  V M++ ++SLM+ G   AS+*A  VKDL+A+  GI+  I   S W S +V*+FLS KLK Q+*G Q+   +   T S  R+ *M ATM T  M+ +K
Subject   3902  WTS*EK*KGQLLTSFQ*MGQG*LTSQVLKGLKSCKGACWGA*LV**VMKNLMIQSHGSQVYQLWISSPEN*QLCLALLGQAKVSCTRVS*RDLKVNL*LLFRPGEL*LTPLKETWKWMIVARWQRLASQRRKVGML*PLRSSSGRLQA*KQVIV*FLMRFNYSLLATLICVC*QYGMMPLFHLPVTPAKAHTTPRRIAQYWGLNKVIY*DCLKADLTSITLRAGGLSIQCLNADCHVISRRAP*LQHLPIMPFSTTCMTSS*LGLSLP*MPFWFQALKRRRSYNPTSA*SSSHLHLASQLA*ISRMAGF*FHMTHSTPMIAGG*QLCHALVII*TW*ILLV*VWKVFCPNLLGNHFTTS*QQRAERM**GICFLVSQFSLMVSALILEEMKVFGRKSCMVTLG*KLCSFWVRMKIVKLRSLSLNVQMKNGLKHTYP*ATWNQQELGGSAKWL*KKIVRQGVGMRQPSNSLMSTGEVWASS*AMLVKDLRAFTLGIREMILSHS*WQSESV*NFLSHKLKRQS*GVQNLMENFCLTHSCQRYL*MLATMSTCFMRQFK  5572

Range 11: 3164 to 3853 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
236.6 bits(510) 0.0 137/230(60%) 0/230(0%) Plus/Plus
Query      241  N*ESTGRNVPFQGLEKYYLVVKLRPLLIMTLMTLTNFLCLVMVTAFGTQWVSC*AQTGLL*KLAYVHLLKVNPLQIQLCQPKLF*SNLVTMLMQRTR**PYSALGIM*G*SSSPQSMR*VGNLEIVSGLYVEFCACNQIIFNPVPH*MXXXXXXXXXRSADVRWMSLTICADLPQITSLKNCAKVVA*T*CTSLRPSKHSTFVPSVTLMEKSRLLILADACQLYLT*PMN  930
                N*EST RNV F    K  LV K + LLIMTLMT  NFL  V   A GT WVSC*A+ G L*KL Y  LLKV+PL+I LC  + F*SNLV MLMQR R**P   LG  *G*  SP +M+*VG+L   SGL   FCA NQII N VPH* AA*   L  R  DVRWM LT  A  PQIT  K+  + VA  *CT LRPSKHS F  +V  M K +  IL DA Q YLT*PMN
Subject   3164  N*ESTKRNVLFLDPGKCCLVAKSKLLLIMTLMTSINFLYPVTAIASGTLWVSC*ARMGSL*KLVYGLLLKVSPLRIHLCPLQQF*SNLVKMLMQRMR**PCFVLGTK*G*LLSPLNMK*VGSLGKASGLCAAFCA*NQIISNLVPH*TAA*SQPLLPRLVDVRWMFLTTYAGPPQITFSKSYVREVASI*CT*LRPSKHSIFALNVISMGKLKS*ILVDAYQPYLT*PMN  3853

Range 12: 2945 to 3124 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
69.8 bits(146) 0.0 32/60(53%) 0/60(0%) Plus/Plus
Query       22  LQQLVQAYLSC*MCLGARSNQY*SLKVHLQWIPAMDQRFWDLLRYSKGTSTLRKLKMAPY  201
                LQ LVQA  +  +CL  R+NQ+ SLKVHL+WI    QR W LLR+ K T   R+LKM  Y
Subject   2945  LQPLVQACPNFWICLEVRNNQFSSLKVHLRWIQVTGQRSWGLLRFLKETLASRRLKMVLY  3124

Range 13: 4058 to 5560 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
466.1 bits(1011) 0.0 275/501(55%) 0/501(0%) Minus/Minus
Query     1135  HASG*HCGLHSVEP*KGKCLVRTSRMALRASILQLQLEA*KTLDVS*QP*GRLPNRYLYALDICFQIFHTRCSIARFFHTYVHQRTVESFHNHISLHGVPSMPSFQPTWPLLIPDYLMGYGF*TIPHSSIQTQFPQPRNPHLGLRKA*PLAKDHHKAFPLALLHFAQC*R*SH*RSWAHREAXXXXXXXXXXXXXXGKVVSQQNVRGNPPRLHQ*CLPSPNCD*SVIGPLTTYDHQYGMSHVKLKSHHV*SSAPLIHQMLVLVASYQSKTAQFSFPQSLKPEWHLRRS*TEPEGSHAYCEKWHSQRTLQSWSPS*NDMAA*TQTLDSQTSGSQYYTCRTCPQVISICHFAQPLVSRGPFGSHMCFDRGHQQVK*KRHFLWSIDKGQRSQEEKAEPHQKSHNGLPLDFQSF*EILQRSQRXXXXXXXXXXXXXXNHHPFPGLF*LN*LEPSWVKQRSRTYLQTXXXXSCTESFCLLQKFQAQLSIPEI*YLKLISLRAMAWN  2637
                H + *HCG HS  P       +     L AS L LQL A*K L+    P     N + YA   C QIFH  CS AR +    HQR     H H   H   S P  +PT  LLIP  L    F*TI H +IQTQ PQ  N H   ++A*   K HH  FP   LHF Q * *+H*R  AH+EA PLSHS  S   GSGKVVSQQ    N P LHQ* LPS N D*SV    TT DH+ GMSHVKLKS H *+ + L  QM V  AS +S+  + S  QSLKP+WHLR +*TE  GSHA C KWH+++ LQSWSPS*NDMA   QTLD QTS SQ YTC+ C Q ISI HF QP + R P GS MCF RGH+QVK*+ H + S +  Q SQE   EPHQK HN L L  QS *   QR Q PNL SL C PLP CN+HPFP LF* +*LE SW KQ+S+ YLQ SS*+SCT +FCL QK QAQL I   *Y +LI LRAMA N
Subject   4058  HETC*HCGQHSKVPLTRMRQAKIFHKVLHASTLPLQLVA*KILNAFGLPSRM*QNHFPYA*GKCSQIFHKHCSTARPYLPCAHQRIAGLSHTHTLPHDFLSKPFCRPT*LLLIPSCLRVCVF*TILHLNIQTQAPQLHNLHPDPKRA*LSTKGHHTTFPPEHLHFFQY*C*NH*RKLAHQEADPLSHSLRSLLLGSGKVVSQQIGTENFPHLHQ*YLPSLNYD*SVTKLSTTCDHRRGMSHVKLKSRHS*NLSQLTRQM*V*AASCRSRIVRSSSLQSLKPKWHLRET*TELGGSHACCGKWHNRQMLQSWSPS*NDMAVCIQTLD*QTSCSQCYTCKICLQAISIYHFVQPPILRDPSGSRMCFGRGHRQVK*RHHSVLSANTDQCSQEGIVEPHQKLHNDLLLSLQSS*GRPQRLQHPNLPSLTCQPLPPCNYHPFPSLF*WS*LELSWAKQKSQIYLQISS*NSCTRNFCLPQKCQAQLLILGA*YPQLIYLRAMALN  5560

Range 14: 2939 to 4003 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
408.4 bits(885) 0.0 204/355(57%) 0/355(0%) Minus/Minus
Query       16  AAFQPSQSLESKLSSIHSLKGGQEQIVSLLSAHPPLCSAGHCQSSQHVLYVHWLCQIKLTCVR*D**PRFLH*CHTWHKCRMLRRPQRGTSCSGHHLGTILQRCDLWKVCTDS*GHPPHVCRAQRQ*RLSCSHSMGHRVENDLIASTKFHIKATHYLQISNLPHTLG***SASHDA*CRIRLSSRSLHKHCHQVASKQFGLTELDLQWIHFQQMNVCQLSKQARLCSTRNPLSAKSSYHHQAQKIC*SHQCHNQQRPQFDNQVVLL*TLKRNIPSCGLSICQEISQEPCKILQIWSHLQFS*C*SPL*IPQKIPKSLVHSWYPLQVHLQGLVLIASCS*AHLAT*ISLHQLLQRQ  1080
                A FQP Q+L SKLS  HSLKGGQE   SL SA PPLC A   QS QH L VHWLCQI+L CV  D * +F H* H   K RMLRRPQ GTS  GH     L++CDLW+ C  S* HPPHV +A++Q   SCS SMGH+V NDLI+ST+   KAT + Q SNL H  G***S S  A* + RLSS SLHKH HQVA K    T+++ Q  HFQQ  V QL K+A  C T NP SA+S+  H  QKI *SHQCHNQQ+ +F NQ  L    K+NIP CGLSI   ISQ   KI QI +HLQ S* *S L* PQK P+ L  + YP QVHLQG  LI S  *A+     SLHQ LQ++
Subject   2939  ATFQPFQNLGSKLSLTHSLKGGQELTFSLFSARPPLCFADRYQSFQHALCVHWLCQIRLICVHQDL*FQFPH*YHI*RKYRMLRRPQLGTSY*GHLPDIALRKCDLWRACIGS*EHPPHVYQARQQWL*SCSRSMGHKVGNDLISSTECRTKATRFPQTSNLLHIQG***STSLGA*YKTRLSSHSLHKHLHQVALKLLERTKMNPQGTHFQQKTVYQLLKRAHPCLTGNPQSARSNCRHGVQKIY*SHQCHNQQKLRFGNQAALPWIQKKNIPFCGLSIYPGISQGLYKISQI*NHLQSS*G*SLL*KPQKTPRPLARNLYPSQVHLQGRELIVSYF*AYPEVWTSLHQWLQKR  4003

Nucleotide Sequence (178 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 33 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
18
36
54
72
90
108
126
144
162
178

Descriptions

Alignments

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 3

Range 1: 6631 to 6726 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.6 bits(150) 0.0 31/32(97%) 0/32(0%) Plus/Plus
Query        1  VLRFPVVVHSVPGSGKSSLIRELITEDESFTA  96
                VLRFPVVVHSVPGSGKSSLIRELITEDESF A
Subject   6631  VLRFPVVVHSVPGSGKSSLIRELITEDESFIA  6726

Range 2: 6631 to 6720 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
65.2 bits(136) 0.0 25/30(83%) 0/30(0%) Minus/Minus
Query        1  ETLVLSDELSYQTTFTATRNTMNDNWKSEH  90
                ETLV S+ELSYQTTFT TRN MN+NWKSEH
Subject   6631  ETLVFSNELSYQTTFTTTRNAMNNNWKSEH  6720

Range 3: 6632 to 6724 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.4 bits(119) 0.0 27/31(87%) 0/31(0%) Minus/Minus
Query        2  L*NSRPQ**ALLSNYFYRYQEHYERQLEI*A  94
                L*NSR Q**ALLSNYFY YQE YE+QLEI*A
Subject   6632  L*NSRLQ**ALLSNYFYHYQERYEQQLEI*A  6724

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OB1

Sequence ID: AB277783.1 Length: 2876 Number of Matches: 3

Range 1: 887 to 982 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.1 bits(149) 0.0 30/32(94%) 0/32(0%) Plus/Plus
Query        1  VLRFPVVVHSVPGSGKSSLIRELITEDESFTA  96
                VLRFPVVVHSVPGSGKSSLIREL+TEDESF A
Subject    887  VLRFPVVVHSVPGSGKSSLIRELVTEDESFIA  982

Range 2: 887 to 982 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.3 bits(123) 0.0 23/32(72%) 0/32(0%) Minus/Minus
Query        1  GCETLVLSDELSYQTTFTATRNTMNDNWKSEH  96
                G ETLVLSD+ SY T FT TRN +N+NWKSEH
Subject    887  GYETLVLSDKFSY*TAFTTTRNAVNNNWKSEH  982

Range 3: 888 to 980 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.9 bits(96) 0.0 23/31(74%) 0/31(0%) Minus/Minus
Query        2  L*NSRPQ**ALLSNYFYRYQEHYERQLEI*A  94
                L*NSRPQ*  LL N FY YQE  E+QLEI*A
Subject    888  L*NSRPQ*QVLLLNCFYHYQERCEQQLEI*A  980

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 3

Range 1: 6631 to 6726 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
69.8 bits(146) 0.0 29/32(91%) 0/32(0%) Plus/Plus
Query        1  VLRFPVVVHSVPGSGKSSLIRELITEDESFTA  96
                VLRFPVVVHSVPGSGKSSLIREL+TEDE+F A
Subject   6631  VLRFPVVVHSVPGSGKSSLIRELVTEDENFIA  6726

Range 2: 6631 to 6726 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
60.6 bits(126) 0.0 24/32(75%) 0/32(0%) Minus/Minus
Query        1  GCETLVLSDELSYQTTFTATRNTMNDNWKSEH  96
                G E LVLSD+ SY TTFT TRN MN+NWKSEH
Subject   6631  GYEILVLSDKFSY*TTFTTTRNAMNNNWKSEH  6726

Range 3: 6632 to 6724 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.1 bits(114) 0.0 25/31(81%) 0/31(0%) Minus/Minus
Query        2  L*NSRPQ**ALLSNYFYRYQEHYERQLEI*A  94
                L*NSRPQ*  LL NYFY YQE YE+QLEI*A
Subject   6632  L*NSRPQ*QVLLLNYFYHYQERYEQQLEI*A  6724

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: Hai1

Sequence ID: AB277787.1 Length: 2876 Number of Matches: 1

Range 1: 887 to 982 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.8 bits(144) 0.0 29/32(91%) 0/32(0%) Plus/Plus
Query        1  VLRFPVVVHSVPGSGKSSLIRELITEDESFTA  96
                VL+FPVVVHSVPGSGKSSLIRELI+EDESF A
Subject    887  VLKFPVVVHSVPGSGKSSLIRELISEDESFVA  982

Rupestris stem pitting associated virus strain BS, complete genome

Sequence ID: AY881627.1 Length: 8743 Number of Matches: 3

Range 1: 6631 to 6726 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.8 bits(144) 0.0 29/32(91%) 0/32(0%) Plus/Plus
Query        1  VLRFPVVVHSVPGSGKSSLIRELITEDESFTA  96
                VL+FPVVVHSVPGSGKSSLIRELI+EDESF A
Subject   6631  VLKFPVVVHSVPGSGKSSLIRELISEDESFVA  6726

Range 2: 6631 to 6711 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.0 bits(94) 0.0 18/27(67%) 0/27(0%) Minus/Minus
Query        1  VLSDELSYQTTFTATRNTMNDNWKSEH  81
                VL DEL Y  TFT T NTMN+NWK +H
Subject   6631  VLRDELPY*ATFTTTWNTMNNNWKFKH  6711

Range 3: 6632 to 6712 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
44.6 bits(91) 0.0 20/27(74%) 0/27(0%) Minus/Minus
Query        2  RPQ**ALLSNYFYRYQEHYERQLEI*A  82
                RPQ *A L  YFY Y EHYE+QLEI*A
Subject   6632  RPQR*APLLGYFYHYLEHYEQQLEI*A  6712

Nucleotide Sequence (325 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 33 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
33
66
99
132
165
198
231
264
297
325

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 7

Range 1: 871 to 1194 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
263.6 bits(569) 0.0 108/108(100%) 0/108(0%) Minus/Plus
Query        1  DVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSG  324
                DVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSG
Subject    871  DVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSG  1194

Range 2: 870 to 1193 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
232.9 bits(502) 0.0 103/108(95%) 0/108(0%) Plus/Minus
Query        2  PLLPQLITSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSRSLMPMASKPEKHRMLDTRRLLIGVKLNK*WQNFE*RTS  325
                PLLPQL+TSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLC+PRLRGSRSLMPMASKPEKHRML+T+RLLIGVKLNK*WQNFE RTS
Subject    870  PLLPQLMTSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCIPRLRGSRSLMPMASKPEKHRMLETKRLLIGVKLNK*WQNFEWRTS  1193

Range 3: 870 to 1193 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
191.2 bits(411) 0.0 85/108(79%) 0/108(0%) Minus/Plus
Query        2  RCPSLKILPSLVELYTD**SSGI*HSVFLWF*RHRH*GSGASKSRHA*LLSGAS*CRY*NIPLFENS*KT**RICRGEIASAY*QAYWKRD*IH*RLCFTCYKLWKKW  325
                RCP  KILPSL+EL+ + *S   *HSVFLWF*RHRH*GSGASKSR+A*LLSGAS*C Y*NI LFEN  K **RICRGEIASAY Q  WK D*IH*  CFTC+KLWKKW
Subject    870  RCPPFKILPSLIELHPNQ*SFSF*HSVFLWF*RHRH*GSGASKSRYA*LLSGAS*CCY*NISLFENPQKA**RICRGEIASAYRQTNWKGD*IH*GFCFTCHKLWKKW  1193

Range 4: 872 to 1192 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
188.0 bits(404) 0.0 86/107(80%) 0/107(0%) Plus/Minus
Query        3  HFFHNL*QVKQSLQ*I*SLFQ*ACQ*ADAISPRQILYQVF*EFSNRGIF**RHHDAPESSYACRDLEAPDP*CLWRQNQRNTEC*IPEDY*SV*SSTSDGRILSEGH  323
                HFFHNL*QVKQ+ Q*I*S FQ  C+*ADAISPRQILYQ F* FSN+ IF**+HHDAPESSYA RDLEAPDP*C WRQNQRNTEC*  +DY*  *SS SDGRIL+ GH
Subject    872  HFFHNL*QVKQNPQ*I*SPFQLVCR*ADAISPRQILYQAF*GFSNKDIF**QHHDAPESSYAYRDLEAPDP*CRWRQNQRNTEC*KLKDY*LG*SSISDGRILNGGH  1192

Range 5: 871 to 1194 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
184.8 bits(397) 0.0 84/108(78%) 0/108(0%) Plus/Minus
Query        1  ATSSTTYNK*SKVFNEFNLSSSRLVNKLTQFRLGRFFIRFFKSSQIEVYFSNDIMMHRKAAMHAAT*RLQILNAYGVKTRETPNVRYQKIINRCKAQQVMAEF*VKDI  324
                ATSSTTY+K*SK+ NEFNL SS  V+KLTQFRLGRFFIR F+ SQI++YFSN+IMMHRKAAMH AT*RLQILNA GVKTRETPNVR  KII+  +AQ VMAEF*++DI
Subject    871  ATSSTTYDK*SKILNEFNLPSSWFVDKLTQFRLGRFFIRLFEGSQIKIYFSNNIMMHRKAAMHTAT*RLQILNADGVKTRETPNVRN*KIIDWGEAQ*VMAEF*MEDI  1194

Range 6: 872 to 1051 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
100.0 bits(212) 0.0 48/60(80%) 0/60(0%) Minus/Plus
Query      144  MSFTQNSAITC*ALHRLIIFWYLTFGVSLVLTP*ALRIWSL*VAACIAAFRCIMMSLLKY  323
                MS  QNSAIT *A  + IIF +LTFGVSLVLTP ALRIWSL*VA CIAAFRCIMM LLKY
Subject    872  MSSIQNSAITY*ASPQSIIF*FLTFGVSLVLTPSALRIWSL*VAVCIAAFRCIMMLLLKY  1051

Range 7: 1094 to 1192 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
32.7 bits(65) 0.0 26/33(79%) 0/33(0%) Minus/Plus
Query        3  PRRNCVSLLTSLLEERXXXXXXXXXXX*VVEEV  101
                PRRNCVSL T+ LE RLNSL+ LLHL *VVEEV
Subject   1094  PRRNCVSLSTNQLEGRLNSLRILLHLS*VVEEV  1192

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 6

Range 1: 871 to 1194 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
258.6 bits(558) 0.0 106/108(98%) 0/108(0%) Minus/Plus
Query        1  DVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSG  324
                DVLHSKFCHHLLSFTPI+NLLVSNIRCFSGFDAIGIKDLEPL RGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSG
Subject    871  DVLHSKFCHHLLSFTPISNLLVSNIRCFSGFDAIGIKDLEPLIRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSG  1194

Range 2: 870 to 1193 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
234.3 bits(505) 0.0 104/108(96%) 0/108(0%) Plus/Minus
Query        2  PLLPQLITSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSRSLMPMASKPEKHRMLDTRRLLIGVKLNK*WQNFE*RTS  325
                PLLPQLITSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPR+RGSRSLMPMASKPEKHRML+TRRLLIGVKLNK WQNFE RTS
Subject    870  PLLPQLITSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRIRGSRSLMPMASKPEKHRMLETRRLLIGVKLNKWWQNFEWRTS  1193

Range 3: 870 to 1193 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
199.5 bits(429) 0.0 89/108(82%) 0/108(0%) Minus/Plus
Query        2  RCPSLKILPSLVELYTD**SSGI*HSVFLWF*RHRH*GSGASKSRHA*LLSGAS*CRY*NIPLFENS*KT**RICRGEIASAY*QAYWKRD*IH*RLCFTCYKLWKKW  325
                RC   KILP L+ELY +**SSG *HSVFL F*RHRH* SGAS SRHA*LLSG S*C Y*NIPLFENS*K ** ICRGEIASAY QAYW+RD*IH*R CF CYKLWKKW
Subject    870  RCSPFKILPPLIELYPN**SSGF*HSVFLRF*RHRH*RSGASNSRHA*LLSGTS*CCY*NIPLFENS*KA**GICRGEIASAYRQAYWERD*IH*RFCFACYKLWKKW  1193

Range 4: 872 to 1192 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
192.1 bits(413) 0.0 87/107(81%) 0/107(0%) Plus/Minus
Query        3  HFFHNL*QVKQSLQ*I*SLFQ*ACQ*ADAISPRQILYQVF*EFSNRGIF**RHHDAPESSYACRDLEAPDP*CLWRQNQRNTEC*IPEDY*SV*SSTSDGRILSEGH  323
                HFFHNL*Q KQ+LQ*I*SL Q*AC+*ADAISPRQI YQ F*EFSNRGIF**+HHD PESSYACR+LEAPD *C WRQN+RNTEC* PEDY*  *SS S GRIL+  H
Subject    872  HFFHNL*QAKQNLQ*I*SLSQ*ACR*ADAISPRQIPYQAF*EFSNRGIF**QHHDVPESSYACRELEAPDL*CRWRQNRRNTEC*KPEDY*LG*SSISGGRILNGEH  1192

Range 5: 871 to 1194 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
189.8 bits(408) 0.0 87/108(81%) 0/108(0%) Plus/Minus
Query        1  ATSSTTYNK*SKVFNEFNLSSSRLVNKLTQFRLGRFFIRFFKSSQIEVYFSNDIMMHRKAAMHAAT*RLQILNAYGVKTRETPNVRYQKIINRCKAQQVMAEF*VKDI  324
                ATSSTTYNK SK+FNEFNLS SRLV+KLTQFRLGRF IR FKSSQIEVYFSN+IMM+RKAAMHAA *RLQI NA GVKT ETPNVR QKI N  KAQ V+AEF*+++I
Subject    871  ATSSTTYNKRSKIFNEFNLSPSRLVDKLTQFRLGRFLIRLFKSSQIEVYFSNNIMMYRKAAMHAAN*RLQIFNADGVKTGETPNVRNQKITNWGKAQ*VVAEF*MENI  1194

Range 6: 884 to 1192 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.0 bits(273) 0.0 85/103(83%) 0/103(0%) Minus/Plus
Query        3  QNSAITC*ALHRLIIFWYLTFGVSLVLTP*ALRIWSL*VAACIAAFRCIMMSLLKYTSXXXXXXXXXXXLPRRNCVSLLTSLLEERXXXXXXXXXXX*VVEEV  311
                QNSA T *AL +L+IFW+LTFGVS VLTP AL+IWSL* AACIAAFR IMM LLKYTSI*ELLK+LI+NLPRRNCVSL TSLL ERLNSLK LL LL*VVEEV
Subject    884  QNSATTY*ALPQLVIFWFLTFGVSPVLTPSALKIWSL*FAACIAAFRYIMMLLLKYTSI*ELLKSLIRNLPRRNCVSLSTSLLGERLNSLKILLRLL*VVEEV  1192

Rupestris stem pitting associated virus strain SG1, complete genome

Sequence ID: AY881626.1 Length: 8742 Number of Matches: 6

Range 1: 871 to 1194 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
255.4 bits(551) 0.0 102/108(94%) 0/108(0%) Minus/Plus
Query        1  DVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSG  324
                D++HSKFCHHLLSFTPI NLL SN+RCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDF+SLVISCGRSG
Subject    871  DIIHSKFCHHLLSFTPIGNLLTSNLRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFSSLVISCGRSG  1194

Range 2: 870 to 1193 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
202.2 bits(435) 0.0 90/108(83%) 0/108(0%) Plus/Minus
Query        2  PLLPQLITSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSRSLMPMASKPEKHRMLDTRRLLIGVKLNK*WQNFE*RTS  325
                PLLPQLIT+E KSSMN ISLPVGLSIS*R+FASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSRS MP+ASKPEKH   + +RL +GVKL+K WQNFE*  S
Subject    870  PLLPQLITNEEKSSMNFISLPVGLSIS*RSFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSRSFMPIASKPEKHLKFEVKRLPMGVKLSKWWQNFE*MIS  1193

Range 3: 871 to 1194 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.9 bits(240) 0.0 55/108(51%) 0/108(0%) Plus/Minus
Query        1  ATSSTTYNK*SKVFNEFNLSSSRLVNKLTQFRLGRFFIRFFKSSQIEVYFSNDIMMHRKAAMHAAT*RLQILNAYGVKTRETPNVRYQKIINRCKAQQVMAEF*VKDI  324
                AT  T YN * K+ NEF  S   L+NKLT+  L R  +   KS  ++VY   DIMMH K  +HA  *R +IL AY +KTR+TP V  QKI    +A+QV+AEF*V DI
Subject    871  ATPPTAYN**GKILNEFYFSPCGLINKLTKLCLSRLLVWLLKSP*VKVYLGYDIMMHWKTTVHATA*RFKILYAYCIKTRKTPQV*GQKIAYGGEAKQVVAEF*VNDI  1194

Range 4: 879 to 1193 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
89.0 bits(188) 0.0 49/105(47%) 0/105(0%) Minus/Plus
Query        2  SLKILPSLVELYTD**SSGI*HSVFLWF*RHRH*GSGASKSRHA*LLSGAS*CRY*NIPLFENS*KT**RICRGEIASAY*QAYWKRD*IH*RLCFTCYKLWKKW  316
                SLKILP L  L+    S  +   VF WF* +RH GS  SK  HA L S AS*CR  +IPL ++S*+    +C G+ +S Y* A+ +R+ IH*      YKLW++W
Subject    879  SLKILPPLA*LHPHRQSFDLKLEVFFWF*CNRHKGS*TSKPWHAQLFSSAS*CRNQDIPLLKDS*EARQGVC*GKASSTY**AHRERNKIH*GFFLISYKLWEEW  1193

Range 5: 878 to 1192 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
74.4 bits(156) 0.0 47/105(45%) 0/105(0%) Plus/Minus
Query        3  HFFHNL*QVKQSLQ*I*SLFQ*ACQ*ADAISPRQILYQVF*EFSNRGIF**RHHDAPESSYACRDLEAPDP*CLWRQNQRNTEC*IPEDY*SV*SSTSDGRILSE  317
                H  H+L* ++++ Q*I  L   A Q* D   P+Q      *E  ++GI   RHHDA E++ AC  LE  DP CL  QNQ+NT     +D    *S  S GRILSE
Subject    878  HSSHSL*LMRKNPQ*ILFLSLWAYQ*VDEALPQQTPCLAS*ESLSKGISWLRHHDALENNCACHGLEVQDPLCLLHQNQKNTSSLRSKDCLWG*S*ASGGRILSE  1192

Range 6: 872 to 1054 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.7 bits(124) 0.0 34/61(56%) 0/61(0%) Minus/Plus
Query      141  MSFTQNSAITC*ALHRLIIFWYLTFGVSLVLTP*ALRIWSL*VAACIAAFRCIMMSLLKYT  323
                +SFTQNSA TC A     IF   T GV LVL  *A RI +L*  AC   F+CIMMS  +YT
Subject    872  ISFTQNSATTCLASPP*AIF*PQT*GVFLVLMQ*A*RILNL*AVACTVVFQCIMMS*PRYT  1054

Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome

Sequence ID: JX559646.1 Length: 8726 Number of Matches: 6

Range 1: 871 to 1194 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
254.9 bits(550) 0.0 102/108(94%) 0/108(0%) Minus/Plus
Query        1  DVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSG  324
                D++HSKFCHHLLSFTPI NLL SN+RCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDF+SLVISCGRSG
Subject    871  DIIHSKFCHHLLSFTPIGNLLTSNMRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFSSLVISCGRSG  1194

Range 2: 870 to 1193 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
205.0 bits(441) 0.0 91/108(84%) 0/108(0%) Plus/Minus
Query        2  PLLPQLITSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSRSLMPMASKPEKHRMLDTRRLLIGVKLNK*WQNFE*RTS  325
                PLLPQLIT+E KSSMN ISLPVGLSIS*R+FASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSRS MP+ASKPEKH M + +RL +GVKL+K WQNFE*  S
Subject    870  PLLPQLITNEEKSSMNFISLPVGLSIS*RSFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSRSFMPIASKPEKHLMFEVKRLPMGVKLSKWWQNFE*MIS  1193

Range 3: 871 to 1194 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
113.3 bits(241) 0.0 55/108(51%) 0/108(0%) Plus/Minus
Query        1  ATSSTTYNK*SKVFNEFNLSSSRLVNKLTQFRLGRFFIRFFKSSQIEVYFSNDIMMHRKAAMHAAT*RLQILNAYGVKTRETPNVRYQKIINRCKAQQVMAEF*VKDI  324
                AT  T YN * K+ NEF  S   L+NKLT+  L R  +   KS  ++VY   +IMMH K  +HA T*R +IL AY +KTR+TP+V  QKI    +A+QV+AEF*V DI
Subject    871  ATPPTAYN**GKILNEFYFSPCGLINKLTKLCLSRLLVWLLKSP*VKVYLGYNIMMHWKTTVHATT*RFKILYAYCIKTRKTPHV*GQKIAYGGEAKQVVAEF*VNDI  1194

Range 4: 879 to 1193 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.7 bits(196) 0.0 50/105(48%) 0/105(0%) Minus/Plus
Query        2  SLKILPSLVELYTD**SSGI*HSVFLWF*RHRH*GSGASKSRHA*LLSGAS*CRY*NIPLFENS*KT**RICRGEIASAY*QAYWKRD*IH*RLCFTCYKLWKKW  316
                SLKILP L  L+    S  + H VF WF* +RH GS  SKS HA L S AS*C   +IPL ++S*+    +C G+ +S Y* A+ +R+ IH*      YKLW++W
Subject    879  SLKILPPLA*LHPHRQSFDLKHEVFFWF*CNRHKGS*TSKSWHAQLFSSAS*CCNQDIPLLKDS*EARQGVC*GKASSTY**AHRERNKIH*GFFLISYKLWEEW  1193

Range 5: 878 to 1192 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.3 bits(169) 0.0 48/105(46%) 0/105(0%) Plus/Minus
Query        3  HFFHNL*QVKQSLQ*I*SLFQ*ACQ*ADAISPRQILYQVF*EFSNRGIF**RHHDAPESSYACRDLEAPDP*CLWRQNQRNTEC*IPEDY*SV*SSTSDGRILSE  317
                H  H+L* ++++ Q*I  L   A Q* D   P+Q      *E  ++GI   +HHDA E++ AC DLE  DP CL  QNQ+NT C   +D    *S  S GRILSE
Subject    878  HSSHSL*LMRKNPQ*ILFLSLWAYQ*VDEALPQQTPCLAS*ESLSKGISWLQHHDALENNCACHDLEVQDPLCLLHQNQKNTSCLRSKDCLWG*S*ASGGRILSE  1192

Range 6: 872 to 1054 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.8 bits(122) 0.0 34/61(56%) 0/61(0%) Minus/Plus
Query      141  MSFTQNSAITC*ALHRLIIFWYLTFGVSLVLTP*ALRIWSL*VAACIAAFRCIMMSLLKYT  323
                +SFTQNSA TC A     IF   T GV LVL  *A RI +L*V AC   F+CIMM   +YT
Subject    872  ISFTQNSATTCLASPP*AIF*PQT*GVFLVLMQ*A*RILNL*VVACTVVFQCIMML*PRYT  1054

Grapevine rupestris stem pitting associated virus isolate GRSPaV WA, complete genome

Sequence ID: KC427107.1 Length: 8742 Number of Matches: 6

Range 1: 871 to 1194 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
254.9 bits(550) 0.0 102/108(94%) 0/108(0%) Minus/Plus
Query        1  DVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSG  324
                D++HSKFCHHLLSFTPI NLL SN+RCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDF+SLVISCGRSG
Subject    871  DIIHSKFCHHLLSFTPIGNLLTSNMRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFSSLVISCGRSG  1194

Range 2: 870 to 1193 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
205.0 bits(441) 0.0 91/108(84%) 0/108(0%) Plus/Minus
Query        2  PLLPQLITSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSRSLMPMASKPEKHRMLDTRRLLIGVKLNK*WQNFE*RTS  325
                PLLPQLIT+E KSSMN ISLPVGLSIS*R+FASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSRS MP+ASKPEKH M + +RL +GVKL+K WQNFE*  S
Subject    870  PLLPQLITNEEKSSMNFISLPVGLSIS*RSFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSRSFMPIASKPEKHLMFEVKRLPMGVKLSKWWQNFE*MIS  1193

Range 3: 871 to 1194 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
113.3 bits(241) 0.0 55/108(51%) 0/108(0%) Plus/Minus
Query        1  ATSSTTYNK*SKVFNEFNLSSSRLVNKLTQFRLGRFFIRFFKSSQIEVYFSNDIMMHRKAAMHAAT*RLQILNAYGVKTRETPNVRYQKIINRCKAQQVMAEF*VKDI  324
                AT  T YN * K+ NEF  S   L+NKLT+  L R  +   KS  ++VY   DIMMH K  +HA  *R +IL AY +KTR+TP+V  QKI    +A+QV+AEF*V DI
Subject    871  ATPPTAYN**GKILNEFYFSPCGLINKLTKLCLSRLLVWLLKSP*VKVYLGYDIMMHWKTTVHATA*RFKILYAYCIKTRKTPHV*GQKIAYGGEAKQVVAEF*VNDI  1194

Range 4: 879 to 1193 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
94.1 bits(199) 0.0 50/105(48%) 0/105(0%) Minus/Plus
Query        2  SLKILPSLVELYTD**SSGI*HSVFLWF*RHRH*GSGASKSRHA*LLSGAS*CRY*NIPLFENS*KT**RICRGEIASAY*QAYWKRD*IH*RLCFTCYKLWKKW  316
                SLKILP L  L+    S  + H VF WF* +RH GS  SK  HA L S AS*CR  +IPL ++S*+    +C G+ +S Y* A+ +R+ IH*      YKLW++W
Subject    879  SLKILPPLA*LHPHRQSFDLKHEVFFWF*CNRHKGS*TSKPWHAQLFSSAS*CRNQDIPLLKDS*EARQGVC*GKASSTY**AHRERNKIH*GFFLISYKLWEEW  1193

Range 5: 878 to 1192 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.0 bits(166) 0.0 48/105(46%) 0/105(0%) Plus/Minus
Query        3  HFFHNL*QVKQSLQ*I*SLFQ*ACQ*ADAISPRQILYQVF*EFSNRGIF**RHHDAPESSYACRDLEAPDP*CLWRQNQRNTEC*IPEDY*SV*SSTSDGRILSE  317
                H  H+L* ++++ Q*I  L   A Q* D   P+Q      *E  ++GI   RHHDA E++ AC  LE  DP CL  QNQ+NT C   +D    *S  S GRILSE
Subject    878  HSSHSL*LMRKNPQ*ILFLSLWAYQ*VDEALPQQTPCLAS*ESLSKGISWLRHHDALENNCACHGLEVQDPLCLLHQNQKNTSCLRSKDCLWG*S*ASGGRILSE  1192

Range 6: 872 to 1054 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.7 bits(124) 0.0 34/61(56%) 0/61(0%) Minus/Plus
Query      141  MSFTQNSAITC*ALHRLIIFWYLTFGVSLVLTP*ALRIWSL*VAACIAAFRCIMMSLLKYT  323
                +SFTQNSA TC A     IF   T GV LVL  *A RI +L*  AC   F+CIMMS  +YT
Subject    872  ISFTQNSATTCLASPP*AIF*PQT*GVFLVLMQ*A*RILNL*AVACTVVFQCIMMS*PRYT  1054

Nucleotide Sequence (181 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 33 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
19
38
57
76
95
114
133
152
171
181

Descriptions

Alignments

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OB1

Sequence ID: AB277783.1 Length: 2876 Number of Matches: 6

Range 1: 683 to 862 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
137.6 bits(294) 0.0 58/60(97%) 0/60(0%) Minus/Plus
Query        2  SIEMMNEEEVEAHYNCVRFLVRNKHKMRYSISGLFEAID*ALSVWHGVIIMNNLVKALST  181
                SIEMMNEEEVEAHYNCVRFLVRNKHKMR SISGLFEAID*ALS+WHGVIIMNNLVKALST
Subject    683  SIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHGVIIMNNLVKALST  862

Range 2: 685 to 861 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
127.5 bits(272) 0.0 57/59(97%) 0/59(0%) Plus/Minus
Query        3  VDKALTKLFIIITPCQTLKA*SIASNNPEIEYLILCLFLTRNRTQL*CASTSSSFIISI  179
                VDKALTKLFIIITPCQ LKA*SIASNNPEIE+LILCLFLTRNRTQL*CASTSSSFIISI
Subject    685  VDKALTKLFIIITPCQILKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISI  861

Range 3: 685 to 861 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.4 bits(252) 0.0 52/59(88%) 0/59(0%) Minus/Plus
Query        3  N*NDE*RRS*SALQLCAVPG*K*AQDEILNFWIV*SYRLGLKCLAWCDYYE*LS*SFVY  179
                N*NDE*R S*S LQLCAVP *K* QDE+LNFW+V*SYRLGLK LAWCDYYE*LS*SFVY
Subject    685  N*NDE*RGS*STLQLCAVPS*K*TQDEVLNFWVV*SYRLGLKYLAWCDYYE*LS*SFVY  861

Range 4: 684 to 863 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
114.2 bits(243) 0.0 53/60(88%) 0/60(0%) Plus/Minus
Query        1  T*TKL*LSYS**SHHAKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQLLLHSSFQL  180
                T*TKL*LSYS**SHHAK+LRPNL*LQT QKLS SSC YF* GTAHSCS LQL LHSSFQL
Subject    684  T*TKL*LSYS**SHHAKYLRPNL*LQTTQKLSTSSCVYF*LGTAHSCSVLQLPLHSSFQL  863

Range 5: 719 to 862 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
99.6 bits(211) 0.0 43/48(90%) 0/48(0%) Plus/Minus
Query        2  RRQSFN*VIHNNHTMPNT*GLIYSFKQSRN*VSHLVLISNQEPHTVVV  145
                RRQSFN*VIHNNHTMPNT*GLIYSFKQ RN*  HLV ISN EPHTVVV
Subject    719  RRQSFN*VIHNNHTMPNT*GLIYSFKQPRN*APHLVFISN*EPHTVVV  862

Range 6: 720 to 827 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
66.1 bits(138) 0.0 31/36(86%) 0/36(0%) Minus/Plus
Query       37  TTTVCGSWLEISTR*DTQFLDCLKL*IRP*VFGMV*  144
                TTTVCGS LEI+TR*  QFL CLKL*IRP*VFGMV*
Subject    720  TTTVCGS*LEINTR*GAQFLGCLKL*IRP*VFGMV*  827

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 6

Range 1: 6427 to 6606 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
136.7 bits(292) 0.0 58/60(97%) 0/60(0%) Minus/Plus
Query        2  SIEMMNEEEVEAHYNCVRFLVRNKHKMRYSISGLFEAID*ALSVWHGVIIMNNLVKALST  181
                +IEMMNEEEVEAHYNCVRFLVRNKHKMR SISGLFEAID*ALSVWHGVIIMNNLVKALST
Subject   6427  AIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALST  6606

Range 2: 6429 to 6605 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
130.3 bits(278) 0.0 58/59(98%) 0/59(0%) Plus/Minus
Query        3  VDKALTKLFIIITPCQTLKA*SIASNNPEIEYLILCLFLTRNRTQL*CASTSSSFIISI  179
                VDKALTKLFIIITPCQTLKA*SIASNNPEIE+LILCLFLTRNRTQL*CASTSSSFIISI
Subject   6429  VDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISI  6605

Range 3: 6429 to 6605 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
125.2 bits(267) 0.0 54/59(92%) 0/59(0%) Minus/Plus
Query        3  N*NDE*RRS*SALQLCAVPG*K*AQDEILNFWIV*SYRLGLKCLAWCDYYE*LS*SFVY  179
                N*NDE*R S*S LQLCAVP *K*AQDE+LNFW+V*SYRLGLKCLAWCDYYE*LS*SFVY
Subject   6429  N*NDE*RGS*STLQLCAVPS*K*AQDEVLNFWVV*SYRLGLKCLAWCDYYE*LS*SFVY  6605

Range 4: 6428 to 6607 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.8 bits(253) 0.0 55/60(92%) 0/60(0%) Plus/Minus
Query        1  T*TKL*LSYS**SHHAKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQLLLHSSFQL  180
                T*TKL*LSYS**SHHAKHLRPNL*LQT QKLS SSCAYF* GTAHSCS LQL LHSSFQL
Subject   6428  T*TKL*LSYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*LGTAHSCSVLQLPLHSSFQL  6607

Range 5: 6463 to 6606 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.4 bits(215) 0.0 44/48(92%) 0/48(0%) Plus/Minus
Query        2  RRQSFN*VIHNNHTMPNT*GLIYSFKQSRN*VSHLVLISNQEPHTVVV  145
                RRQSFN*VIHNNHTMPNT*GLIYSFKQ RN*  HLVLISN EPHTVVV
Subject   6463  RRQSFN*VIHNNHTMPNT*GLIYSFKQPRN*APHLVLISN*EPHTVVV  6606

Range 6: 6464 to 6571 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.5 bits(141) 0.0 32/36(89%) 0/36(0%) Minus/Plus
Query       37  TTTVCGSWLEISTR*DTQFLDCLKL*IRP*VFGMV*  144
                TTTVCGS LEISTR*  QFL CLKL*IRP*VFGMV*
Subject   6464  TTTVCGS*LEISTR*GAQFLGCLKL*IRP*VFGMV*  6571

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 6

Range 1: 6427 to 6606 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
130.3 bits(278) 0.0 57/60(95%) 0/60(0%) Minus/Plus
Query        2  SIEMMNEEEVEAHYNCVRFLVRNKHKMRYSISGLFEAID*ALSVWHGVIIMNNLVKALST  181
                SIEMMNEEEVEAHYNCVRFLVRNKHKMR SISGLFEAID*ALSVWH  IIMNNLVKALST
Subject   6427  SIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHY*IIMNNLVKALST  6606

Range 2: 6428 to 6607 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.4 bits(263) 0.0 57/60(95%) 0/60(0%) Plus/Minus
Query        1  T*TKL*LSYS**SHHAKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQLLLHSSFQL  180
                T*TKL*LSYS**S++AKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQL LHSSFQL
Subject   6428  T*TKL*LSYS**SNNAKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQLPLHSSFQL  6607

Range 3: 6429 to 6605 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
121.1 bits(258) 0.0 56/59(95%) 0/59(0%) Plus/Minus
Query        3  VDKALTKLFIIITPCQTLKA*SIASNNPEIEYLILCLFLTRNRTQL*CASTSSSFIISI  179
                VDKALTKLFIII  CQTLKA*SIASNNPEIE+LILCLFLTRNRTQL*CASTSSSFIISI
Subject   6429  VDKALTKLFIII**CQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISI  6605

Range 4: 6429 to 6605 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.8 bits(253) 0.0 55/59(93%) 0/59(0%) Minus/Plus
Query        3  N*NDE*RRS*SALQLCAVPG*K*AQDEILNFWIV*SYRLGLKCLAWCDYYE*LS*SFVY  179
                N*NDE*R S*SALQLCAVPG*K*AQDE+LNFWIV*SYRLGLKCLA  DYYE*LS*SFVY
Subject   6429  N*NDE*RGS*SALQLCAVPG*K*AQDEMLNFWIV*SYRLGLKCLALLDYYE*LS*SFVY  6605

Range 5: 6460 to 6606 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
104.6 bits(222) 0.0 46/49(94%) 0/49(0%) Plus/Minus
Query        2  RRQSFN*VIHNNHTMPNT*GLIYSFKQSRN*VSHLVLISNQEPHTVVVR  148
                RRQSFN*VIHNN  MPNT*GLIYSFKQSRN* SHLVLISNQEPHTVVVR
Subject   6460  RRQSFN*VIHNNLIMPNT*GLIYSFKQSRN*ASHLVLISNQEPHTVVVR  6606

Range 6: 6461 to 6568 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.3 bits(169) 0.0 33/36(92%) 0/36(0%) Minus/Plus
Query       40  RTTTVCGSWLEISTR*DTQFLDCLKL*IRP*VFGMV  147
                RTTTVCGSWLEISTR*D QFLDCLKL*IRP*VFG++
Subject   6461  RTTTVCGSWLEISTR*DAQFLDCLKL*IRP*VFGII  6568

Grapevine Rupestris stem pitting associated virus, complete genome

Sequence ID: AF026278.1 Length: 8725 Number of Matches: 5

Range 1: 6427 to 6606 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
126.6 bits(270) 0.0 54/60(90%) 0/60(0%) Minus/Plus
Query        2  SIEMMNEEEVEAHYNCVRFLVRNKHKMRYSISGLFEAID*ALSVWHGVIIMNNLVKALST  181
                SIEMM EEEVEAHYNCVRFLVRNKHKMR SISGLFEAID*ALS+WH + IMNNLVKALST
Subject   6427  SIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHYLSIMNNLVKALST  6606

Range 2: 6429 to 6605 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
99.6 bits(211) 0.0 47/59(80%) 0/59(0%) Plus/Minus
Query        3  VDKALTKLFIIITPCQTLKA*SIASNNPEIEYLILCLFLTRNRTQL*CASTSSSFIISI  179
                VD ALTKLFII+  CQ LKA*SIASN PEIE+LILCLFLT+N TQL* ASTSSS IIS+
Subject   6429  VDNALTKLFIILK*CQILKA*SIASNRPEIEHLILCLFLTKNLTQL*WASTSSSVIISM  6605

Range 3: 6463 to 6600 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.0 bits(129) 0.0 26/46(57%) 0/46(0%) Plus/Minus
Query        8  QSFN*VIHNNHTMPNT*GLIYSFKQSRN*VSHLVLISNQEPHTVVV  145
                Q FN*+IHN   MPNT*GLI  FK + N* SHL+L+ +QE +T+++
Subject   6463  QCFN*IIHNTQIMPNT*GLINRFK*A*N*ASHLMLVPDQESNTIIM  6600

Range 4: 6431 to 6601 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.8 bits(109) 0.0 32/57(56%) 0/57(0%) Plus/Minus
Query        7  TKL*LSYS**SHHAKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQLLLHSSFQ  177
                T L*L+YS* S++AK+LRPN  LQ   KLSISS A  *P   H+ +   LL  SSFQ
Subject   6431  TML*LNYS*YSNNAKYLRPNQSLQIGLKLSISSYACS*PRI*HNYNGPPLLPRSSFQ  6601

Range 5: 6429 to 6602 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.2 bits(101) 0.0 31/58(53%) 0/58(0%) Minus/Plus
Query        6  N*NDE*RRS*SALQLCAVPG*K*AQDEILNFWIV*SYRLGLKCLAWCDYYE*LS*SFV  179
                +*ND+  RS   L LC + G + A DE+LNF  +*S  LGLK LA  +YYE* S*S V
Subject   6429  H*NDDRGRSGGPL*LC*ILGQEQA*DEMLNFRPI*SD*LGLKYLALFEYYE*FS*SIV  6602

Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome

Sequence ID: JX559646.1 Length: 8726 Number of Matches: 5

Range 1: 6427 to 6606 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
126.2 bits(269) 0.0 53/60(88%) 0/60(0%) Minus/Plus
Query        2  SIEMMNEEEVEAHYNCVRFLVRNKHKMRYSISGLFEAID*ALSVWHGVIIMNNLVKALST  181
                SIEMM EEEVEAHYNCVRFLVRNKHKMR SISGLFEA+D*ALS+WH + IMNNLVKALST
Subject   6427  SIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAVD*ALSIWHCLSIMNNLVKALST  6606

Range 2: 6429 to 6605 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
105.1 bits(223) 0.0 48/59(81%) 0/59(0%) Plus/Minus
Query        3  VDKALTKLFIIITPCQTLKA*SIASNNPEIEYLILCLFLTRNRTQL*CASTSSSFIISI  179
                VD ALTKLFII+  CQ LKA*S ASN PEIE+LILCLFLTRN TQL*CASTSSS IIS+
Subject   6429  VDNALTKLFIILKQCQILKA*STASNRPEIEHLILCLFLTRNLTQL*CASTSSSVIISM  6605

Range 3: 6463 to 6600 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.0 bits(140) 0.0 29/46(63%) 0/46(0%) Plus/Minus
Query        8  QSFN*VIHNNHTMPNT*GLIYSFKQSRN*VSHLVLISNQEPHTVVV  145
                Q FN +IHN  TMPNT*GLI  FK + N*  HL+L+ N EPHT+VV
Subject   6463  QCFNQIIHNTQTMPNT*GLINRFK*A*N*APHLMLVPN*EPHTIVV  6600

Range 4: 6435 to 6602 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.8 bits(109) 0.0 30/56(54%) 0/56(0%) Minus/Plus
Query        6  NDE*RRS*SALQLCAVPG*K*AQDEILNFWIV*SYRLGLKCLAWCDYYE*LS*SFV  173
                ND+       LQLC VP *+ A DE+LNF  +*S  LGLK LA  +YYE*  *S V
Subject   6435  NDDRGGGGGTLQLCEVPS*EQA*DEVLNFRPI*SG*LGLKYLALFEYYE*FG*SIV  6602

Range 5: 6464 to 6601 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 27/46(59%) 0/46(0%) Plus/Minus
Query        7  TKL*LSYS**SHHAKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCS  144
                T L* +YS* S++AK+LRPN  LQ   KLS SS A  * GT+H+CS
Subject   6464  TML*PNYS*YSNNAKYLRPNQPLQIGLKLSTSSYACS*LGTSHNCS  6601

Nucleotide Sequence (523 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 33 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
53
106
159
212
265
318
371
424
477
523

Descriptions

Alignments

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 8

Range 1: 5074 to 5562 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
342.9 bits(742) 0.0 141/163(87%) 0/163(0%) Plus/Minus
Query        3  FMHQVCIVACIQWDLRKEGVQ*KFPIWLCAP*FCSFNLRLREFKTFPDSHEEGH*IITFMSWIYAFKSFTCIAQLLAFSTPVFIKELLGRFITTSHFTMFLQRHLSNPPGPG*FQVT*WDVGFEPFLIRALSFKFLNFAILILAKEKHDL*PRITTQLLRPHN  491
                FMHQVCIVACIQWDLRKE V+*KFPIWLCAP FCSFNLRLREFKTFPDSHEEGH*IITFMSWIYAFKSFTCIAQ LA STP+FIKELLGRFITTSHFT+FLQ HLSNPPGP *FQ+T*WD+GF+PFLIRA   KFLN AILILA EKHDL*PRITT+L   H+
Subject   5074  FMHQVCIVACIQWDLRKESVK*KFPIWLCAPQFCSFNLRLREFKTFPDSHEEGH*IITFMSWIYAFKSFTCIAQFLASSTPMFIKELLGRFITTSHFTVFLQCHLSNPPGPC*FQIT*WDMGFKPFLIRAFRLKFLNLAILILA*EKHDL*PRITTKLFLSHS  5562

Range 2: 5066 to 5560 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
338.3 bits(732) 0.0 141/165(85%) 0/165(0%) Plus/Minus
Query        5  HAPGLHCGLHSVGPSKGRCPVKISHMALRALILQLQLEASRI*DVS*QP*GRSLNHYLYVLDICFQIFHMHCSIARFFHTCVHQRTVGSFHNHIALHDVPSTPSFQPTWPWLIPSYLMGCGF*TIPHSSTQFQVPQLRNPHLGQGKA*PLAKDHHTASPPSQLQT  499
                HA GLHCGLHSVGPSKG+C VKISHMALRA ILQLQLEASRI*DVS*QP*GRSLNHYLYVLDICFQIFHMHCSI+RFFHT VHQRTVGSFHNHI+LH VPS PSFQPTWP LIP YLMG GF*TIPHSS Q QVPQ RNPHLG  KA*PLAKDHH A P + L +
Subject   5066  HASGLHCGLHSVGPSKGKCQVKISHMALRASILQLQLEASRI*DVS*QP*GRSLNHYLYVLDICFQIFHMHCSISRFFHTYVHQRTVGSFHNHISLHGVPSMPSFQPTWPLLIPDYLMGYGF*TIPHSSIQTQVPQPRNPHLGLRKA*PLAKDHHKAFPLALLHS  5560

Range 3: 5188 to 5562 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
303.5 bits(656) 0.0 122/125(98%) 0/125(0%) Minus/Plus
Query        3  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGKSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLVHE  377
                WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCG+SE+LSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANL+HE
Subject   5188  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEKLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMHE  5562

Range 4: 5077 to 5139 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.3 bits(110) 0.0 20/21(95%) 0/21(0%) Minus/Plus
Query      426  VRAEKLCGDPWLKVMLFLGQD  488
                VR EKLCGDPWLKVMLFLGQD
Subject   5077  VREEKLCGDPWLKVMLFLGQD  5139

Range 5: 5084 to 5563 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
315.9 bits(683) 0.0 141/160(88%) 0/160(0%) Minus/Plus
Query        2  RRSCVVILG*RSCFSLAKMRIAKLRNLKLSARMRNGSKPTSH*VTWNQPGPGGLERWR*RNIVKCDVVMKRPNSSLMNTGVEKASN*AMHVKDLKAYIQDIKVMIQ*PSSWLSGNVLNSRSLKLKLQN*GAQSHMGNFYWTPSFRRSH*MQATMQTWCMK  481
                R+S VVILG*RSCFS AKMRIA+LRNL L+ARMRNG KP SH*V WNQ GPGGLERW *RN VK DVVMKRPNSSLMN GVE+A N*AMHVKDLKAYIQDIKVMIQ*PSSWLSGNVLNSRSLKLKLQN*GAQSHMGNFY T SFRRSH*MQATMQT CMK
Subject   5084  RKSFVVILG*RSCFS*AKMRIARLRNLSLNARMRNGLKPISH*VIWNQQGPGGLERWH*RNTVK*DVVMKRPNSSLMNIGVEEARN*AMHVKDLKAYIQDIKVMIQ*PSSWLSGNVLNSRSLKLKLQN*GAQSHMGNFYLTLSFRRSH*MQATMQT*CMK  5563

Range 6: 5085 to 5564 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
309.9 bits(670) 0.0 139/160(87%) 0/160(0%) Minus/Plus
Query        1  GEAVW*SLAKGHAFPWPR*GLRS*GT*N*VLE*GMVQNPHPIK*LGINQGQVGWKDGVEGTS*SAMWL*NDPTVL**TQVWKKRAIEQCM*KI*KHISKT*R**FSDLPHGCQETS*ILEASS*SCKIKARKAIWEIFTGHLPFEGPTECKPQCKPGA*N  480
                G+A+W*SLAKGHAF  PR*GLR *GT* *+LE*GMV NP+PIK* GIN+GQVGWKDG+EGT *S MWL*NDPTVL**T VWKKR IEQCM*KI*KHISKT*R**FSDLPHGCQETS*ILEASS*SCKI+ARKAIWEIFT H PFEGPTECKPQCKP A*+
Subject   5085  GKALW*SLAKGHAFLRPR*GLRG*GT*V*MLE*GMV*NPYPIK*SGINKGQVGWKDGIEGTP*SEMWL*NDPTVL**T*VWKKREIEQCM*KI*KHISKT*R**FSDLPHGCQETS*ILEASS*SCKIEARKAIWEIFT*HFPFEGPTECKPQCKPDA*S  5564

Range 7: 5187 to 5561 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
290.2 bits(627) 0.0 119/125(95%) 0/125(0%) Plus/Minus
Query        4  SCTRFALWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFENLRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLFPHLCSSKNCWVVS*PHRTSRCSFNAIFPTHLALVDSKLLNGMWVLNH  378
                SC RFALWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFENLRRFLTAMRKVTESLPLCLGYMLSNLSHALLN SL PHLCSSKNCWVVS*PH TSRCSFNAIFPTHLALVDS+LLNG+WVLNH
Subject   5187  SCIRFALWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFENLRRFLTAMRKVTESLPLCLGYMLSNLSHALLNFSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSRLLNGIWVLNH  5561

Range 8: 5082 to 5120 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.0 bits(57) 0.0 11/13(85%) 0/13(0%) Plus/Minus
Query      445  MTFSQGSPHSFSA  483
                MTFSQGSP SFS+
Subject   5082  MTFSQGSPQSFSS  5120

Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome

Sequence ID: KR054734.1 Length: 8753 Number of Matches: 8

Range 1: 5188 to 5562 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
289.3 bits(625) 0.0 117/125(94%) 0/125(0%) Minus/Plus
Query        3  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGKSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLVHE  377
                WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHR G  EQLSNACERFESIYPRHKGNDS+TFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHN N+ +E
Subject   5188  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVNMFNE  5562

Range 2: 5077 to 5139 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.3 bits(110) 0.0 20/21(95%) 0/21(0%) Minus/Plus
Query      426  VRAEKLCGDPWLKVMLFLGQD  488
                VR EKLCGDPWLKVMLFLGQD
Subject   5077  VREEKLCGDPWLKVMLFLGQD  5139

Range 3: 5187 to 5543 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
217.8 bits(469) 0.0 93/119(78%) 0/119(0%) Plus/Minus
Query       22  LWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFENLRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLFPHLCSSKNCWVVS*PHRTSRCSFNAIFPTHLALVDSKLLNGMWVLNH  378
                LWLAF+GTF++ VSS+NFP GFARL+FAAST GFEN +RF TA++KV ESLPLCLG MLSNLS ALLNCS  P LCSSKNC VVS P RTSRCSF AIFPTHLALVDS+LL GM VLNH
Subject   5187  LWLAFNGTFDKNVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSNLSQALLNCSPIPPLCSSKNC*VVSYPQRTSRCSFKAIFPTHLALVDSRLLKGMCVLNH  5543

Range 4: 5082 to 5120 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.8 bits(50) 0.0 9/13(69%) 0/13(0%) Plus/Minus
Query      445  MTFSQGSPHSFSA  483
                +T S GSPHSFS+
Subject   5082  ITLSHGSPHSFSS  5120

Range 5: 5069 to 5563 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
161.4 bits(346) 0.0 82/165(50%) 0/165(0%) Minus/Plus
Query        2  LEL*GRRSCVVILG*RSCFSLAKMRIAKLRNLKLSARMRNGSKPTSH*VTWNQPGPGGLERWR*RNIVKCDVVMKRPNSSLMNTGVEKASN*AMHVKDLKAYIQDIKVMIQ*PSSWLSGNVLNSRSLKLKLQN*GAQSHMGNFYWTPSFRRSH*MQATMQTWCMK  496
                +++*GR++CVV  G + CFS A+M+I KL++L LS +M+NGSK T  *  W+QPG  G  +W *++ V+C   M++ +SS MNT    ASN*AM VKDLKA+  DI+VMI     WLSG+V + +S K +LQ+*GAQS M NF  T   ++ H*M ATM    M+
Subject   5069  MKV*GRKNCVVTHGLKLCFS*ARMKIVKLKSLSLSVQMKNGSKHTYP*AIWSQPGLDGSGKWP*KSTVRCVAGMRQLSSSSMNTEGVWASN*AMLVKDLKAFTLDIRVMIPSLF*WLSGSV*SFQSHKWRLQS*GAQSLMENFCLTHFCQKFH*MLATMSICSMR  5563

Range 6: 5077 to 5559 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
159.6 bits(342) 0.0 79/161(49%) 0/161(0%) Plus/Minus
Query        6  MHQVCIVACIQWDLRKEGVQ*KFPIWLCAP*FCSFNLRLREFKTFPDSHEEGH*IITFMSWIYAFKSFTCIAQLLAFSTPVFIKELLGRFITTSHFTMFLQRHLSNPPGPG*FQVT*WDVGFEPFLIRALSFKFLNFAILILAKEKHDL*PRITTQLLRPH  488
                +  + IVA IQW+  ++ V+ KF I LCAP* CS +L L +  T PDSH +   IIT MS + AFKSFT IA LLA +  VFI+ELL   I  +H T+  Q H  +P  PG* Q+    V FEPF I  L  K  NF I ILA EKH+  P +TTQ   PH
Subject   5077  IEHIDIVASIQWNF*QKCVKQKFSIRLCAP*LCSLHLWL*KL*TLPDSH*KSDGIITLMSRVNAFKSFTSIA*LLAHTPSVFIEELLSCLIPATHLTVLFQGHFPDPSSPG*LQIAQGYVCFEPFFI*TLRLKLFNFTIFILA*EKHNFKPWVTTQFFLPH  5559

Range 7: 5072 to 5545 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
147.7 bits(316) 0.0 76/158(48%) 0/158(0%) Plus/Minus
Query       20  HCGLHSVGPSKGRCPVKISHMALRALILQLQLEASRI*DVS*QP*GRSLNHYLYVLDICFQIFHMHCSIARFFHTCVHQRTVGSFHNHIALHDVPSTPSFQPTWPWLIPSYLMGCGF*TIPHSSTQFQVPQLRNPHLGQGKA*PLAKDHHTASPPSQL  493
                HCG HS+      C  +I H ALRAL LQ  L A +  + S QP  +  NHY YV   CFQIFH HC IAR +  CVH+RT    H   A H   S P  +P  PWL P     C F*TI H +TQ Q  QL N H G  KA*  A  HHT  PPS L
Subject   5072  HCG*HSMELLTKMCQAEIFHKALRALALQPPLVALKTLNASGQPLKK*WNHYPYV*GKCFQIFHKHCLIARPYPLCVHRRTAELSHTRNAPHGALSRPFSRPI*PWLTPDCSRVCVF*TILHLNTQTQALQLHNLHPGLRKA*L*AMGHHTVFPPSHL  5545

Range 8: 5076 to 5549 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
139.0 bits(297) 0.0 75/158(47%) 0/158(0%) Minus/Plus
Query       16  CEGGEAVW*SLAKGHAFPWPR*GLRS*GT*N*VLE*GMVQNPHPIK*LGINQGQVGWKDGVEGTS*SAMWL*NDPTVL**TQVWKKRAIEQCM*KI*KHISKT*R**FSDLPHGCQETS*ILEASS*SCKIKARKAIWEIFTGHLPFEGPTECKPQCK  489
                CEGG+ VW* +A  +AF  P * L S*  * *V +* MVQN H ++  G+NQG +G ++G+E   * A+ +*++  VL *TQ    RAI+QC+*KI*KH+  T* **F    +GC E   + +A+S  CK KARKA+W+I   H+  +   EC PQC+
Subject   5076  CEGGKTVW*PMA*SYAFLRPG*RL*S*RA*V*VFK*RMVQNTHTLEQSGVNQG*MGRENGLERAP*GALRV*DNSAVLR*TQRGYGRAIKQCL*KI*KHLP*T*G**FHHFFNGCPEAFKVFKATSGGCKAKARKALWKISA*HIFVKSSIEC*PQCQ  5549

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 8

Range 1: 5066 to 5557 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
344.7 bits(746) 0.0 141/164(86%) 0/164(0%) Plus/Minus
Query        8  APGLHCGLHSVGPSKGRCPVKISHMALRALILQLQLEASRI*DVS*QP*GRSLNHYLYVLDICFQIFHMHCSIARFFHTCVHQRTVGSFHNHIALHDVPSTPSFQPTWPWLIPSYLMGCGF*TIPHSSTQFQVPQLRNPHLGQGKA*PLAKDHHTASPPSQLQT  499
                A GLHCGLHSV P KG+C VK SHMALRALILQL+LEA +I*DVS*QP* RSLNHYLYVLDICFQIFHMHCSIARFFHTCVHQRTVGSFHNHI+LH VPSTPSFQPTWPW IPSYLMG GF*TIPH + Q Q PQLRNPHLGQGKA*PLAKDHHTASP S L +
Subject   5066  ASGLHCGLHSVEPLKGKCQVKTSHMALRALILQLRLEALKI*DVS*QP*ERSLNHYLYVLDICFQIFHMHCSIARFFHTCVHQRTVGSFHNHISLHGVPSTPSFQPTWPWSIPSYLMGYGF*TIPHLNIQTQAPQLRNPHLGQGKA*PLAKDHHTASPLSPLHS  5557

Range 2: 5188 to 5562 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
300.3 bits(649) 0.0 122/125(98%) 0/125(0%) Minus/Plus
Query        3  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGKSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLVHE  377
                WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCG+SEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANL+ E
Subject   5188  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMLE  5562

Range 3: 5077 to 5139 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.3 bits(110) 0.0 20/21(95%) 0/21(0%) Minus/Plus
Query      426  VRAEKLCGDPWLKVMLFLGQD  488
                VR EKLCGDPWLKVMLFLGQD
Subject   5077  VREEKLCGDPWLKVMLFLGQD  5139

Range 4: 5077 to 5562 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
331.4 bits(717) 0.0 138/162(85%) 0/162(0%) Plus/Minus
Query        3  FMHQVCIVACIQWDLRKEGVQ*KFPIWLCAP*FCSFNLRLREFKTFPDSHEEGH*IITFMSWIYAFKSFTCIAQLLAFSTPVFIKELLGRFITTSHFTMFLQRHLSNPPGPG*FQVT*WDVGFEPFLIRALSFKFLNFAILILAKEKHDL*PRITTQLLRPH  488
                F HQVCIVACIQW+L KE V+*K PIWLCAP*FCSF+LRL +FKTFP+SHE+GH*IITFMSWIYAFKSFTCIAQLLA STPVFIKELLGRFITTSHFT+FLQRHLSNPPGPG FQVT*WD+GF+PFLI     K LNFAILILAKEKHDL*PRITTQLL  H
Subject   5077  FKHQVCIVACIQWNL*KESVK*KLPIWLCAP*FCSFDLRL*KFKTFPNSHEKGH*IITFMSWIYAFKSFTCIAQLLASSTPVFIKELLGRFITTSHFTVFLQRHLSNPPGPGRFQVT*WDMGFKPFLI*TFRLKLLNFAILILAKEKHDL*PRITTQLLLSH  5562

Range 5: 5079 to 5564 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
312.6 bits(676) 0.0 139/162(86%) 0/162(0%) Minus/Plus
Query        1  EGGEAVW*SLAKGHAFPWPR*GLRS*GT*N*VLE*GMVQNPHPIK*LGINQGQVGWKDGVEGTS*SAMWL*NDPTVL**TQVWKKRAIEQCM*KI*KHISKT*R**FSDLPHGCQETS*ILEASS*SCKIKARKAIWEIFTGHLPFEGPTECKPQCKPGA*N  486
                E GEAVW*SLAKGHAFPWPR*GLRS*G * *+ +*GMV NP+PIK*LGI+QGQVGWKDGVEGT *S MWL*NDPTVL**TQVWKKRAIEQCM*KI*KHISKT*R**FSDL HGC ETS*I +ASS SCKIKARKAIWE+FT H PF+G TECKPQCKP A*+
Subject   5079  ERGEAVW*SLAKGHAFPWPR*GLRS*GA*V*MFK*GMV*NPYPIK*LGIDQGQVGWKDGVEGTP*SEMWL*NDPTVL**TQVWKKRAIEQCM*KI*KHISKT*R**FSDLSHGC*ETS*IFKASSRSCKIKARKAIWEVFT*HFPFKGSTECKPQCKPDA*S  5564

Range 6: 5084 to 5563 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
312.2 bits(675) 0.0 137/160(86%) 0/160(0%) Minus/Plus
Query        2  RRSCVVILG*RSCFSLAKMRIAKLRNLKLSARMRNGSKPTSH*VTWNQPGPGGLERWR*RNIVKCDVVMKRPNSSLMNTGVEKASN*AMHVKDLKAYIQDIKVMIQ*PSSWLSGNVLNSRSLKLKLQN*GAQSHMGNFYWTPSFRRSH*MQATMQTWCMK  481
                RRSCVVILG*RSCFSLAKMRIAKLR+L L+ +MRNG KP SH*VTWN+PGPGGLERWR*RN VK DVVMKRPNSSLMNTGVE+ASN*AMHVKDLKAYIQDIKVMIQ*P SWL GNVLN +SLK KLQN*GAQSHMG+FY T SF+R H*MQATMQT C+K
Subject   5084  RRSCVVILG*RSCFSLAKMRIAKLRSLSLNVQMRNGLKPISH*VTWNRPGPGGLERWR*RNTVK*DVVMKRPNSSLMNTGVEEASN*AMHVKDLKAYIQDIKVMIQ*PFSWLLGNVLNFQSLKSKLQN*GAQSHMGSFYLTLSFQRFH*MQATMQT*CLK  5563

Range 7: 5187 to 5561 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
292.0 bits(631) 0.0 120/125(96%) 0/125(0%) Plus/Minus
Query        4  SCTRFALWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFENLRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLFPHLCSSKNCWVVS*PHRTSRCSFNAIFPTHLALVDSKLLNGMWVLNH  378
                S  RFALWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFENLRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSL PHLCSSKNCWVVS*PH TSRCSFNAIFPTHLALVDSKLLNG+WVLNH
Subject   5187  SSIRFALWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFENLRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSKLLNGIWVLNH  5561

Range 8: 5082 to 5120 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
32.7 bits(65) 0.0 12/13(92%) 0/13(0%) Plus/Minus
Query      445  MTFSQGSPHSFSA  483
                MTFSQGSPHSFS+
Subject   5082  MTFSQGSPHSFSS  5120

Grapevine rupestris stem pitting associated virus isolate Tannat Rspav1, complete genome

Sequence ID: KR528585.1 Length: 8595 Number of Matches: 8

Range 1: 5170 to 5544 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
288.8 bits(624) 0.0 116/125(93%) 0/125(0%) Minus/Plus
Query        3  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGKSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLVHE  377
                WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYE TQQFFDEHR G  EQLSNACERFESIYPRHKGNDS+TFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLD+FLSKVPLNASHN+N+ HE
Subject   5170  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKVPLNASHNSNMFHE  5544

Range 2: 5059 to 5121 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.3 bits(110) 0.0 20/21(95%) 0/21(0%) Minus/Plus
Query      426  VRAEKLCGDPWLKVMLFLGQD  488
                VR EKLCGDPWLKVMLFLGQD
Subject   5059  VREEKLCGDPWLKVMLFLGQD  5121

Range 3: 5169 to 5519 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
213.2 bits(459) 0.0 91/117(78%) 0/117(0%) Plus/Minus
Query       28  LAFSGTFERKVSSKNFPYGFARLNFAAST*GFENLRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLFPHLCSSKNCWVVS*PHRTSRCSFNAIFPTHLALVDSKLLNGMWVLNH  378
                LAFSGT +RK S++NFPYG AR + AAST GFENLRRF TA+RKV ES PLCLG MLSNLSHALL+CS  P LCSSKNC V S*P RTSRCSF AI PTHLALVDS+LL GMWVLNH
Subject   5169  LAFSGTLDRKESNRNFPYGLARRSLAASTWGFENLRRFRTAIRKVIESFPLCLG*MLSNLSHALLSCSPVPPLCSSKNC*VTS*PQRTSRCSFKAILPTHLALVDSRLLRGMWVLNH  5519

Range 4: 5064 to 5102 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
27.6 bits(54) 0.0 9/13(69%) 0/13(0%) Plus/Minus
Query      445  MTFSQGSPHSFSA  483
                MTF+ GSPH+FS+
Subject   5064  MTFNHGSPHNFSS  5102

Range 5: 5059 to 5544 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
219.6 bits(473) 0.0 96/162(59%) 0/162(0%) Plus/Minus
Query        3  FMHQVCIVACIQWDLRKEGVQ*KFPIWLCAP*FCSFNLRLREFKTFPDSHEEGH*IITFMSWIYAFKSFTCIAQLLAFSTPVFIKELLGRFITTSHFTMFLQRHLSNPPGPG*FQVT*WDVGFEPFLIRALSFKFLNFAILILAKEKHDL*PRITTQLLRPH  488
                FM  V I+  I WD R++GV *+ PIWL  P*F SFNL LR+F+T  DSH+EG+*II+FM W+ AFK  TCIAQLL  ST + IKELL  FITT+H  M  Q H ++PPGPG* Q+T  DVGF+PF I A      NF ILIL +EKHD *P +TTQLL P+
Subject   5059  FMKHVGIMTSI*WDFRQKGV**ELPIWLGPP*FGSFNLGLRKFETLSDSHKEGY*IISFMPWVNAFKPLTCIAQLLTSSTSMLIKELLSHFITTTHLPMLFQGHFTHPPGPG*LQITQGDVGFKPFFI*AF*LHLFNFTILILTQEKHDF*PWVTTQLLLPN  5544

Range 6: 5063 to 5545 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
201.3 bits(433) 0.0 95/161(59%) 0/161(0%) Minus/Plus
Query        2  GRRSCVVILG*RSCFSLAKMRIAKLRNLKLSARMRNGSKPTSH*VTWNQPGPGGLERWR*RNIVKCDVVMKRPNSSLMNTGVEKASN*AMHVKDLKAYIQDIKVMIQ*PSSWLSGNVLNSRSLKLKLQN*GAQSHMGNFYWTPSFRRSH*MQATMQTWCMK  484
                GRRSCVV  G*+SCFS  KMRI KL+    +A+M+NG KPTS *V W+QPGPGG  +W *++I +C VVMK  N+SLM+  VE  SN*AMHV+ LKA+ Q IK MIQ*PS WLS +V N RS +LKL N G  SHMG+ Y TP   +SH*M   + T  MK
Subject   5063  GRRSCVVTHG*KSCFSWVKMRIVKLKRWSQNAQMKNGLKPTSP*VIWSQPGPGGWVKWP*KSIGRCVVVMK*LNNSLMSIEVELVSN*AMHVRGLKAFTQGIKEMIQ*PSLWLSESVSNFRSPRLKLPNYGGPSHMGSSY*TPFCLKSH*MLVIIPTCFMK  5545

Range 7: 5048 to 5515 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
186.6 bits(401) 0.0 86/156(55%) 0/156(0%) Plus/Minus
Query       32  HSVGPSKGRCPVKISHMALRALILQLQLEASRI*DVS*QP*GRSLNHYLYVLDICFQIFHMHCSIARFFHTCVHQRTVGSFHNHIALHDVPSTPSFQPTWPWLIPSYLMGCGF*TIPHSSTQFQVPQLRNPHLGQGKA*PLAKDHHTASPPSQLQT  499
                H VG    R  +  SHMA  A++ QLQ  AS+I*D   QP*GR LNH+LY L  CFQ  HMHCS+A  FH   HQR V S HNH A  D  S P + PTWPWL P Y  GCGF*TI H S      QL NPHL  GKA* L   HHT SPP  L +
Subject   5048  HLVGL*TERSLIGTSHMAWPAVVWQLQPGASKI*DAFGQP*GRLLNHFLYALGKCFQTSHMHCSVAHQFHLYAHQRIVESLHNHNAPPDALSRPFYPPTWPWLTPDYSGGCGF*TILHLSILTPSLQLHNPHLDPGKA*LLTMGHHTTSPP*HLHS  5515

Range 8: 5058 to 5516 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
161.0 bits(345) 0.0 81/153(53%) 0/153(0%) Minus/Plus
Query       31  CEGGEAVW*SLAKGHAFPWPR*GLRS*GT*N*VLE*GMVQNPHPIK*LGINQGQVGWKDGVEGTS*SAMWL*NDPTVL**TQVWKKRAIEQCM*KI*KHISKT*R**FSDLPHGCQETS*ILEASS*SCKIKARKAIWEIFTGHLPFEGPTEC  489
                C GGE VW* + K HAFP  R*GL S*     +L+* MV NPHP +* G+NQGQVG  +G+E  S  A+WL*+D T+L**   W   A EQCM*++*KH+ K *R *F++LP+GC + S I EA  *SC+  A +AIWE+    L    PT+C
Subject   5058  C*GGEVVW*PMVKSHAFPGSR*GL*S*RDGVRMLK*RMV*NPHPPE*SGVNQGQVGG*NGLERASGGALWL*SDSTIL**A*RWNW*ATEQCM*EV*KHLPKA*RK*FNNLPYGCPKASQIFEAPG*SCQTTAGQAIWEVPIRLLSV*SPTKC  5516

Grapevine rupestris stem pitting associated virus isolate CS BR, complete genome

Sequence ID: KX958435.1 Length: 8743 Number of Matches: 8

Range 1: 5189 to 5563 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
292.5 bits(632) 0.0 118/125(94%) 0/125(0%) Minus/Plus
Query        3  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGKSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLVHE  377
                WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHR G  EQLSNACERFESIYPRHKGNDS+TFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHN N+ HE
Subject   5189  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVNMFHE  5563

Range 2: 5078 to 5140 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.3 bits(110) 0.0 20/21(95%) 0/21(0%) Minus/Plus
Query      426  VRAEKLCGDPWLKVMLFLGQD  488
                VR EKLCGDPWLKVMLFLGQD
Subject   5078  VREEKLCGDPWLKVMLFLGQD  5140

Range 3: 5188 to 5544 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
222.4 bits(479) 0.0 96/119(81%) 0/119(0%) Plus/Minus
Query       22  LWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFENLRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLFPHLCSSKNCWVVS*PHRTSRCSFNAIFPTHLALVDSKLLNGMWVLNH  378
                LWLAF+GTF+RKVSS+NFP GFARL+FAAST GFEN RRF TA++KV ESLPLCLG MLS  S ALLNCS  P LCSSKNC VVS PHRTSRCSF AIFPTHLALVDSKLL GM VLNH
Subject   5188  LWLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFRRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPIPPLCSSKNC*VVSYPHRTSRCSFKAIFPTHLALVDSKLLKGMCVLNH  5544

Range 4: 5083 to 5121 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.6 bits(56) 0.0 10/13(77%) 0/13(0%) Plus/Minus
Query      445  MTFSQGSPHSFSA  483
                +TFS GSPHSFS+
Subject   5083  ITFSHGSPHSFSS  5121

Range 5: 5090 to 5560 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
172.4 bits(370) 0.0 85/157(54%) 0/157(0%) Plus/Minus
Query        6  MHQVCIVACIQWDLRKEGVQ*KFPIWLCAP*FCSFNLRLREFKTFPDSHEEGH*IITFMSWIYAFKSFTCIAQLLAFSTPVFIKELLGRFITTSHFTMFLQRHLSNPPGPG*FQVT*WDVGFEPFLIRALSFKFLNFAILILAKEKHDL*PRITTQL  476
                M  + IVA I WD R E V+ +FPI LC P*  SF+L L + + F D H +G+ +I  +S I AFK+FT IA LLA S PVFI+ELL  FI TS+ T+ LQ H  NP  PG* Q+    V FEPF I  L  K  NF +LILA EKH+ *PRITTQL
Subject   5090  MKHINIVASI*WDFR*ESVKQEFPIRLCTP*LRSFHLWL*KLQAFSDGH*KGNGVIALVSRINAFKTFTGIA*LLAHSPPVFIEELLSCFIPTSYLTVLLQGHFPNPSSPG*LQIAQGYVCFEPFFI*TLRLKLFNFTVLILA*EKHNF*PRITTQL  5560

Range 6: 5085 to 5546 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
166.0 bits(356) 0.0 83/154(54%) 0/154(0%) Minus/Plus
Query       20  RRSCVVILG*RSCFSLAKMRIAKLRNLKLSARMRNGSKPTSH*VTWNQPGPGGLERWR*RNIVKCDVVMKRPNSSLMNTGVEKASN*AMHVKDLKAYIQDIKVMIQ*PSSWLSGNVLNSRSLKLKLQN*GAQSHMGNFYWTPSFRRSH*MQATM  481
                R+SCVVI G*+ CFS A+MR  KL++L LS +M+NGSK T  *  W+QPG  GL +W *R+ V+ DV MK+ ++S MNTG E ASN*AM V  LKA+I D + M   P  W S N  + +S + KL++*G QS MGN   T S+R+SH*M ATM
Subject   5085  RKSCVVIRG*KLCFS*ARMRTVKLKSLSLSVQMKNGSKHTYP*AIWSQPGLDGLGKWP*RSTVRYDVGMKQLSNSSMNTGGEWASN*AMPVNVLKAFILDTRAMTPLPF*WPSENA*SFQSHRWKLRS*GVQSLMGNSCLTLSYRKSH*MLATM  5546

Range 7: 5064 to 5546 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
155.0 bits(332) 0.0 78/161(48%) 0/161(0%) Plus/Minus
Query       20  HCGLHSVGPSKGRCPVKISHMALRALILQLQLEASRI*DVS*QP*GRSLNHYLYVLDICFQIFHMHCSIARFFHTCVHQRTVGSFHNHIALHDVPSTPSFQPTWPWLIPSYLMGCGF*TIPHSSTQFQVPQLRNPHLGQGKA*PLAKDHHTASPPSQLQTH  502
                HCG H +G S G+C   ISH AL AL  QL   A +   V  +P  R  +H   V D CFQ  H HC IAR F  CVH+R    FH HI  H  PS P  QP  PWL P+    C F*TI H +TQ Q  QL +PH G  KA* LA DHHTA P   L ++
Subject   5064  HCG*HLMGLSIGKCQAGISHKALHALASQLPPVALKTSGVFGRPLKR*WSHCPCV*DKCFQNVHRHCLIARPFPPCVHRRIAELFHTHIVPHGAPSRPFSQPI*PWLTPNCSRVCVF*TILHLNTQTQALQLHSPHPGLRKA*LLATDHHTAFPLVHLHSY  5546

Range 8: 5077 to 5547 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
153.7 bits(329) 0.0 77/157(49%) 0/157(0%) Minus/Plus
Query       19  CEGGEAVW*SLAKGHAFPWPR*GLRS*GT*N*VLE*GMVQNPHPIK*LGINQGQVGWKDGVEGTS*SAMWL*NDPTVL**TQVWKKRAIEQCM*KI*KHISKT*R**FSDLPHGCQETS*ILEASS*SCKIKARKAIWEIFTGHLPFEGPTECKPQC  489
                C  G+AVW*S+AK +AF  P *GL S*  * *V +* MVQN H ++  G+NQG +GW++G+EG  *  MW+*N+  +L *TQ    RAI+QC+*  *KH+S T   *   L +G  +T  + +A+  SC+ KA KA+WEI   H P E P +C PQC
Subject   5077  CTRGKAVW*SVAKSYAFLRPG*GL*S*RA*V*VFK*RMVQNTHTLEQFGVNQG*MGWENGLEGAP*GTMWV*NNSAILR*TQGGNGRAIKQCL*TF*KHLS*TQGQ*LHYLFNGRPKTPEVFKATGGSCEAKACKALWEIPA*HFPIESPIKC*PQC  5547

Nucleotide Sequence (357 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 33 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
36
72
108
144
180
216
252
288
324
357

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 7

Range 1: 475 to 828 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
284.7 bits(615) 0.0 117/118(99%) 0/118(0%) Plus/Plus
Query        3  ISSSDKSNHVVSKKGIGDSDSLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVGSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLK  356
                ISSSDKSNHV+SKKGIGDSDSLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVGSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLK
Subject    475  ISSSDKSNHVISKKGIGDSDSLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVGSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLK  828

Range 2: 513 to 827 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
227.0 bits(489) 0.0 100/105(95%) 0/105(0%) Minus/Minus
Query       41  LSRYLLDSGCEYISHQLPSGAKSI*PSEILYW*AQGFRLSGEPTRISGGITAVARSMLGLTTSRKVMRSRIDQ*WISS*RKRFLAPVEITRGTNFLSESESPIPF  355
                LS+YLLD+GCEYISHQLPSGAKSI PSEILYW*AQGF+LSGEPTRISGGITAVARSMLGLTTSRKVMRSRIDQ* ISS*RKRFLAPVEITRGTNFLSESESPIPF
Subject    513  LSKYLLDNGCEYISHQLPSGAKSIWPSEILYW*AQGFKLSGEPTRISGGITAVARSMLGLTTSRKVMRSRIDQ**ISS*RKRFLAPVEITRGTNFLSESESPIPF  827

Range 3: 475 to 825 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
226.0 bits(487) 0.0 93/117(79%) 0/117(0%) Minus/Minus
Query        3  KQIPT*QWL*IHFTPITIRGKEHLTLRNSILVSPRI*AFRRANKDFRGYYSRCKKHVGSDHLQKGNEITYRPVMDLIMKEKISCTGGDYTRNQLFERVRITDPLLADNMVRLVTRAY  353
                KQIPT*QWL*IHFTP+TIR KEHL LRNSILVSPR+*AFRRANKDFRGYYSRCKKHVG +H Q+G EITYRPVM+ IMK+KI CT  D+TR+Q  ERVRIT+ LLA++MVRL+TRAY
Subject    475  KQIPT*QWL*IHFTPVTIRSKEHLALRNSILVSPRV*AFRRANKDFRGYYSRCKKHVGPNHFQEGYEITYRPVMNFIMKKKIPCTCRDHTRDQFLERVRITNSLLANDMVRLITRAY  825

Range 4: 473 to 826 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
211.4 bits(455) 0.0 93/118(79%) 0/118(0%) Minus/Minus
Query        1  *ADTYLTVVVNTFHTNYHPGQRAFDPQKFYTGKPKDLGFQESQQGFQGVLQPLQEACWV*PPPER**DHV*TSNGSHHEGKDFLHRWRLHEEPTF*ASQNHRSPSC*QHG*TCH*SLS  354
                *A+TYLT+VVNTFHT+YHP QRAF PQKFYTGKPK L FQESQQGFQGVLQPLQEACW *P P R *DHV*TSN  HHE KD LH  R HE P  *ASQNH+ PSC* HG*T H*SLS
Subject    473  *ANTYLTMVVNTFHTSYHPEQRAFGPQKFYTGKPKGLSFQESQQGFQGVLQPLQEACWA*PLPGRL*DHV*TSNEFHHEEKDSLHL*RSHEGPIS*ASQNHQFPSC**HG*TYH*SLS  826

Range 5: 474 to 782 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
176.1 bits(378) 0.0 80/103(78%) 0/103(0%) Plus/Plus
Query        2  DKL**QV*PCCQQEGDR*F*LAQKVGSSCNLHRCKKSFPS**DPLLVYT*SHYLSGGGQTQHASCNGCNTP*NPCWLS*KPKSLGLPV*NF*GSNALCPGW*L  310
                DKL** V*PC  QEG+ *F*LAQ++G SC+L+RCK+SF S**+ LLVYT*SH L G G  QHASCNGCNTP*NPCWLS*K K LGLPV*NF*G NALC GW*L
Subject    474  DKL***V*PCH*QEGNW*F*LAQEIGPSCDLYRCKESFSS**NSLLVYT*SHNLPGSG*AQHASCNGCNTP*NPCWLS*KLKPLGLPV*NF*GPNALCSGW*L  782

Range 6: 473 to 673 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.9 bits(216) 0.0 48/67(72%) 0/67(0%) Plus/Plus
Query        1  **ALVTSLTMLSARRGSVILTRSKSWFLV*SPPVQEIFSFMMRSITGLYVISLPFWRWSDPTCFLQR  201
                **ALV SLTM  ARR  VILTRS++W LV*S  VQ IF FMM+ ITGLYVIS P W+W  PTCFLQR
Subject    473  **ALVISLTMSLARRELVILTRSRNWSLV*SLQVQGIFFFMMKFITGLYVIS*PSWKWLGPTCFLQR  673

Range 7: 731 to 829 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.3 bits(158) 0.0 29/33(88%) 0/33(0%) Plus/Plus
Query      259  TSIEFLRVKCSLPRMVIGVKCIHNHCQVGICLR  357
                TSIEFLR KCSL RMV GVKCIHNHCQVGICL+
Subject    731  TSIEFLRAKCSLLRMVTGVKCIHNHCQVGICLK  829

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 7

Range 1: 475 to 828 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
282.9 bits(611) 0.0 117/118(99%) 0/118(0%) Plus/Plus
Query        3  ISSSDKSNHVVSKKGIGDSDSLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVGSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLK  356
                ISSSDKSNHVVSKKGIGDSDSLKKLVPRVIS GARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVGSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLK
Subject    475  ISSSDKSNHVVSKKGIGDSDSLKKLVPRVISAGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVGSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLK  828

Range 2: 513 to 827 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
230.2 bits(496) 0.0 99/105(94%) 0/105(0%) Minus/Minus
Query       41  LSRYLLDSGCEYISHQLPSGAKSI*PSEILYW*AQGFRLSGEPTRISGGITAVARSMLGLTTSRKVMRSRIDQ*WISS*RKRFLAPVEITRGTNFLSESESPIPF  355
                LS+YLLD+GCEYISHQLPSGAKSI PSEILYW*AQGF+LSGEPTRISGGITAVARS+LGLTTSRKVMRSRIDQ*WISS*RKRFLAP EITRGTNFLSESESPIPF
Subject    513  LSKYLLDNGCEYISHQLPSGAKSIWPSEILYW*AQGFKLSGEPTRISGGITAVARSILGLTTSRKVMRSRIDQ*WISS*RKRFLAPAEITRGTNFLSESESPIPF  827

Range 3: 475 to 825 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
227.4 bits(490) 0.0 94/117(80%) 0/117(0%) Minus/Minus
Query        3  KQIPT*QWL*IHFTPITIRGKEHLTLRNSILVSPRI*AFRRANKDFRGYYSRCKKHVGSDHLQKGNEITYRPVMDLIMKEKISCTGGDYTRNQLFERVRITDPLLADNMVRLVTRAY  353
                KQIPT*QWL*IHFTP+TIR KEHL LR+SILVSPRI*AFRRANKDFR Y+S CKKH+G +H Q+G+EITYRP+MDLIMK+KI CT GD+TRNQ  E VRIT+ LLADNMVRLVTRAY
Subject    475  KQIPT*QWL*IHFTPVTIRSKEHLALRDSILVSPRI*AFRRANKDFRRYHSCCKKHIGPNHFQEGDEITYRPIMDLIMKKKIPCTSGDHTRNQFLE*VRITNSLLADNMVRLVTRAY  825

Range 4: 473 to 826 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
214.1 bits(461) 0.0 92/118(78%) 0/118(0%) Minus/Minus
Query        1  *ADTYLTVVVNTFHTNYHPGQRAFDPQKFYTGKPKDLGFQESQQGFQGVLQPLQEACWV*PPPER**DHV*TSNGSHHEGKDFLHRWRLHEEPTF*ASQNHRSPSC*QHG*TCH*SLS  354
                *A+TYLT+VVNTFHT+YHP QRAF PQ+FYTGKPKDL FQESQQGF  V Q LQEA W *P P R**DHV*T+NGSHHE KD LH+ R HEEP  * SQNH+ PSC*QHG*TCH*SLS
Subject    473  *ANTYLTMVVNTFHTSYHPEQRAFGPQRFYTGKPKDLSFQESQQGFPEVSQLLQEAYWA*PLPGR**DHV*TNNGSHHEEKDSLHQRRSHEEPIS*VSQNHQFPSC*QHG*TCH*SLS  826

Range 5: 474 to 782 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
179.3 bits(385) 0.0 79/103(77%) 0/103(0%) Plus/Plus
Query        2  DKL**QV*PCCQQEGDR*F*LAQKVGSSCNLHRCKKSFPS**DPLLVYT*SHYLSGGGQTQHASCNGCNTP*NPCWLS*KPKSLGLPV*NF*GSNALCPGW*L  310
                DKL**QV*PCCQQEG+ *F*L Q++GSSC+L  CK+SF S**DPLLVYT*SH+L G G  Q+ASCN C+T  NPCWLS*K KSLGLPV*N *G NALC GW*L
Subject    474  DKL**QV*PCCQQEGNW*F*LTQEIGSSCDLRWCKESFSS**DPLLVYT*SHHLPGSG*AQYASCNSCDTSGNPCWLS*KLKSLGLPV*NL*GPNALCSGW*L  782

Range 6: 473 to 673 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.9 bits(240) 0.0 51/67(76%) 0/67(0%) Plus/Plus
Query        1  **ALVTSLTMLSARRGSVILTRSKSWFLV*SPPVQEIFSFMMRSITGLYVISLPFWRWSDPTCFLQR  201
                **ALVTSLTMLSARR  VILT S++WFLV*SP VQ IF FMMRSI GLYVIS P W+W  P CFLQ+
Subject    473  **ALVTSLTMLSARRELVILTHSRNWFLV*SPLVQGIFFFMMRSIIGLYVISSPSWKWLGPICFLQQ  673

Range 7: 731 to 829 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.6 bits(150) 0.0 28/33(85%) 0/33(0%) Plus/Plus
Query      259  TSIEFLRVKCSLPRMVIGVKCIHNHCQVGICLR  357
                TSIE LR KCSL RMV GVKCIHNHCQVGICL+
Subject    731  TSIESLRAKCSLLRMVTGVKCIHNHCQVGICLK  829

Grapevine rupestris stem pitting associated virus isolate GRSPaV LSL, complete genome

Sequence ID: KR054735.1 Length: 8754 Number of Matches: 7

Range 1: 475 to 828 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
253.5 bits(547) 0.0 103/118(87%) 0/118(0%) Plus/Plus
Query        3  ISSSDKSNHVVSKKGIGDSDSLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVGSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLK  356
                ISSSDKSNH++SKKGIGDSDSL++L PRVISTGARNLFLHDEIHYWS  DLI+FL+V RPNMLLATAVIPPEILVGS ESLNPWAYQYRIS GQ+LFAPDGNW EMYSQPLS RYLLK
Subject    475  ISSSDKSNHIISKKGIGDSDSLRRLTPRVISTGARNLFLHDEIHYWSTCDLISFLDVTRPNMLLATAVIPPEILVGSTESLNPWAYQYRISNGQLLFAPDGNWNEMYSQPLSCRYLLK  828

Range 2: 513 to 827 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
172.4 bits(370) 0.0 77/105(73%) 0/105(0%) Minus/Minus
Query       41  LSRYLLDSGCEYISHQLPSGAKSI*PSEILYW*AQGFRLSGEPTRISGGITAVARSMLGLTTSRKVMRSRIDQ*WISS*RKRFLAPVEITRGTNFLSESESPIPF  355
                LS+YL D+GCEYIS Q PSGAKS  P  I YW*AQGF+LS EPTRISGGITAVARSM G  TS+  +RS +DQ* ISS RKRFLAPV++TRG N LSESESP+PF
Subject    513  LSKYLQDNGCEYISFQFPSGAKSNCPLLIRYW*AQGFKLSVEPTRISGGITAVARSMFGRVTSKNEIRSHVDQ**ISSWRKRFLAPVDMTRGVNLLSESESPMPF  827

Range 3: 475 to 825 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
120.2 bits(256) 0.0 57/117(49%) 0/117(0%) Minus/Minus
Query        3  KQIPT*QWL*IHFTPITIRGKEHLTLRNSILVSPRI*AFRRANKDFRGYYSRCKKHVGSDHLQKGNEITYRPVMDLIMKEKISCTGGDYTRNQLFERVRITDPLLADNMVRLVTRAY  353
                +QIP   WL*+HF P++IR KE L + N+ILVSPRI*AF  A+K+FRG +S  ++HV S ++QK + +T  P+M+ IM+E+ISC  G  T +   + VRI++ L  + +V  VTRAY
Subject    475  EQIPAG*WL*VHFIPVSIRSKEQLPITNTILVSPRI*AFS*AHKNFRGNHSSSEEHVWSGNIQK*D*VTC*PIMNFIMEEEISCASGYDTGS*PPQ*VRISNALFTNYVV*FVTRAY  825

Range 4: 476 to 826 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
94.5 bits(200) 0.0 52/117(44%) 0/117(0%) Minus/Minus
Query        4  *ADTYLTVVVNTFHTNYHPGQRAFDPQKFYTGKPKDLGFQESQQGFQGVLQPLQEACWV*PPPER**DHV*TSNGSHHEGKDFLHRWRLHEEPTF*ASQNHRSPSC*QHG*TCH*SL  354
                *A+T   + V+TFH+++H  QRA     +  GKPKDL FQ S Q FQG  Q  + AC V   P+    H+ T+N  HH G+DFL +W  H E T   S N + P  *  G  CH*SL
Subject    476  *ANTCRIMAVSTFHSSFHQEQRATAHY*YDIGKPKDLSFQLSPQEFQGESQQ*RGACLVG*HPKMRLGHMLTNNEFHHGGRDFLRQWI*HGELTSSVSPNLQCPFY*LCGLICH*SL  826

Range 5: 477 to 776 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.3 bits(158) 0.0 46/100(46%) 0/100(0%) Plus/Plus
Query        5  KL**QV*PCCQQEGDR*F*LAQKVGSSCNLHRCKKSFPS**DPLLVYT*SHYLSGGGQTQHASCNGCNTP*NPCWLS*KPKSLGLPV*NF*GSNALCPGW  304
                KL**Q+ P    +G   F L ++V S C++H  KKS P **+ LLV  * + + G   T+HA    C++P*N C L+*K KSLGLP+   * + ALC  W
Subject    477  KL**QIKPHN**KGHWRFGLTEEVNSPCHIHWRKKSLPP**NSLLVNM*PNLIFGCYPTKHAPRYCCDSP*NSCGLN*KLKSLGLPISY**WAVALCS*W  776

Range 6: 476 to 661 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.8 bits(74) 0.0 25/62(40%) 0/62(0%) Plus/Plus
Query        4  *ALVTSLTMLSARRGSVILTRSKSWFLV*SPPVQEIFSFMMRSITGLYVISLPFWRWSDPTC  189
                *ALVT+ T    +R   I T       V  P  QEI S MM+ I G +V    FW   D TC
Subject    476  *ALVTNQTT*LVKRALEIRTH*GG*LPVSYPLAQEISSSMMKFIIGQHVT*SHFWMLPDQTC  661

Range 7: 731 to 823 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.9 bits(72) 0.0 14/31(45%) 0/31(0%) Plus/Plus
Query      259  TSIEFLRVKCSLPRMVIGVKCIHNHCQVGIC  351
                T+I  +   CSL  M  G+KC H+H   GIC
Subject    731  TNIVLVMGSCSLLLMETGMKCTHSHYPAGIC  823

Rupestris stem pitting associated virus strain BS, complete genome

Sequence ID: AY881627.1 Length: 8743 Number of Matches: 8

Range 1: 475 to 828 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
247.6 bits(534) 0.0 99/118(84%) 0/118(0%) Plus/Plus
Query        3  ISSSDKSNHVVSKKGIGDSDSLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVGSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLK  356
                ISSSDKS+ V+SKKGIGDSD+L++LVPRVISTGARNLFLHDEIHYWSI DLI FL+V +P+MLLATAVIPPE+LVGSPESLNPWAYQYR+S  Q+LFAPDGNW EMYSQPLS RYLLK
Subject    475  ISSSDKSSQVISKKGIGDSDTLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYRVSNNQLLFAPDGNWNEMYSQPLSCRYLLK  828

Range 2: 513 to 740 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
132.1 bits(282) 0.0 60/76(79%) 0/76(0%) Minus/Minus
Query       41  LYW*AQGFRLSGEPTRISGGITAVARSMLGLTTSRKVMRSRIDQ*WISS*RKRFLAPVEITRGTNFLSESESPIPF  268
                LYW*AQG RLSGEPT  SGGITAVA+S+LG  TS+K+MRS IDQ* ISS RKRF APVEITRGTN  S SESPIPF
Subject    513  LYW*AQGLRLSGEPTSTSGGITAVAKSILGFATSKKLMRSLIDQ**ISSCRKRFRAPVEITRGTNLRSVSESPIPF  740

Range 3: 759 to 827 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.2 bits(101) 0.0 20/23(87%) 0/23(0%) Minus/Minus
Query      287  LSRYLLDSGCEYISHQLPSGAKS  355
                LSRYL D GCEYIS QLPSGAKS
Subject    759  LSRYLQDKGCEYISFQLPSGAKS  827

Range 4: 475 to 828 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
110.6 bits(235) 0.0 55/118(47%) 0/118(0%) Minus/Minus
Query        3  LKQIPT*QWL*IHFTPITIRGKEHLTLRNSILVSPRI*AFRRANKDFRGYYSRCKKHVGSDHLQKGNEITYRPVMDLIMKEKISCTGGDYTRNQLFERVRITDPLLADNMVRLVTRAY  356
                LK + T   L*+H  PI I  K+ L + +S+LV PRI AFRRAN+     +  C++H    ++QK NEI   PVM+LIM+EKI  T G+Y RNQ  E VRI + LLA+++   +TR Y
Subject    475  LK*VSTG*RL*VHLIPIAIWSKKQLVVTDSVLVGPRIEAFRRANQHLWRNHCSCQEHTWLCNIQKINEIAD*PVMNLIMQEKIPSTCGNYARNQPPECVRIANTLLANDLTGFITRTY  828

Range 5: 473 to 640 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.0 bits(118) 0.0 29/56(52%) 0/56(0%) Minus/Minus
Query        1  PER**DHV*TSNGSHHEGKDFLHRWRLHEEPTF*ASQNHRSPSC*QHG*TCH*SLS  168
                P+ **D   TSN SHH GKD  H W+L  EPT    QN + PSC*      H*+LS
Subject    473  PKN**DR*LTSNESHHAGKDSEHLWKLRAEPTSGVCQNRQYPSC**LDWIYH*NLS  640

Range 6: 698 to 829 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
44.1 bits(90) 0.0 21/44(48%) 0/44(0%) Minus/Minus
Query      226  P*ADTYLTVVVNTFHTNYHPGQRAFDPQKFYTGKPKDLGFQESQ  357
                P*   Y    V+T H+N H  Q+A       TG+PKD GFQESQ
Subject    698  P*VGIYRIKAVSTSHSNCHLEQKAIGCY*LCTGRPKD*GFQESQ  829

Range 7: 510 to 776 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
74.8 bits(157) 0.0 42/89(47%) 0/89(0%) Plus/Plus
Query       38  QEGDR*F*LAQKVGSSCNLHRCKKSFPS**DPLLVYT*SHYLSGGGQTQHASCNGCNTP*NPCWLS*KPKSLGLPV*NF*GSNALCPGW  304
                QEG   F*   +VGS+ N HRC +SFP+**D LLV   SH   G  + ++A  N  ++     WLS*KP+SLGLPV + *   A C  W
Subject    510  QEGYWRF*HTPEVGSARNFHRCSESFPA**DSLLVNQRSH*FFGCCKAKYALGNCSDSSRGAGWLS*KPQSLGLPVQSQ*QPIAFCSRW  776

Range 8: 473 to 670 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.1 bits(114) 0.0 32/66(48%) 0/66(0%) Plus/Plus
Query        1  **ALVTSLTMLSARRGSVILTRSKSWFLV*SPPVQEIFSFMMRSITGLYVISLPFWRWSDPTCFLQ  198
                ** LV +     ARR   ILT S  WF  * P V  IFS MMR ITG   ISL FW      C  Q
Subject    473  **VLVINPVKSLARRVLAILTHSGGWFRA*FPQVLGIFSCMMRFITGQSAISLIFWMLQSQVCSWQ  670

Grapevine rupestris stem pitting associated virus isolate SK30, complete genome

Sequence ID: KX274277.1 Length: 8724 Number of Matches: 7

Range 1: 475 to 828 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
244.8 bits(528) 0.0 98/118(83%) 0/118(0%) Plus/Plus
Query        3  ISSSDKSNHVVSKKGIGDSDSLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVGSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLK  356
                ISSS KS+ V+SKKGIGDSD+L++LVPRVISTGARNLFLHDEIHYWSI DLI FL+V +P+MLLATAVIPPE+LVGSPESLNPWAYQYR+S  Q+LFAPDGNW EMYSQPLS RYLLK
Subject    475  ISSSSKSSQVISKKGIGDSDTLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYRVSNNQLLFAPDGNWNEMYSQPLSCRYLLK  828

Range 2: 513 to 740 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
139.4 bits(298) 0.0 63/76(83%) 0/76(0%) Minus/Minus
Query       41  LYW*AQGFRLSGEPTRISGGITAVARSMLGLTTSRKVMRSRIDQ*WISS*RKRFLAPVEITRGTNFLSESESPIPF  268
                LYW*AQG RLSGEPT  SGGITAVA+S+LGL TS+K+MRS IDQ* ISS RKRFLAPVEITRGTN LS SESPIPF
Subject    513  LYW*AQGLRLSGEPTSTSGGITAVAKSILGLATSKKLMRSLIDQ**ISSCRKRFLAPVEITRGTNLLSVSESPIPF  740

Range 3: 759 to 827 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.2 bits(101) 0.0 20/23(87%) 0/23(0%) Minus/Minus
Query      287  LSRYLLDSGCEYISHQLPSGAKS  355
                LSRYL D GCEYIS QLPSGAKS
Subject    759  LSRYLQDKGCEYISFQLPSGAKS  827

Range 4: 475 to 828 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
120.7 bits(257) 0.0 58/118(49%) 0/118(0%) Minus/Minus
Query        3  LKQIPT*QWL*IHFTPITIRGKEHLTLRNSILVSPRI*AFRRANKDFRGYYSRCKKHVGSDHLQKGNEITYRPVMDLIMKEKISCTGGDYTRNQLFERVRITDPLLADNMVRLVTRAY  356
                LK + T Q L*+H  PI I  K+ L + +S+LV PRI AFRRAN+     Y  C++H    ++QK NEI   PVM+LIM+EKI  T G+Y RNQ  E VRIT+ LLA+++    TR Y
Subject    475  LK*VSTGQRL*VHLIPIAIWSKKQLVITDSVLVGPRIEAFRRANQHLWRNYCSCQEHTWLGNIQKINEIAD*PVMNLIMQEKIPSTSGNYARNQPPECVRITNTLLANDLTGFTTRTY  828

Range 5: 506 to 829 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
100.0 bits(212) 0.0 52/108(48%) 0/108(0%) Minus/Minus
Query       34  P*ADTYLTVVVNTFHTNYHPGQRAFDPQKFYTGKPKDLGFQESQQGFQGVLQPLQEACWV*PPPER**DHV*TSNGSHHEGKDFLHRWRLHEEPTF*ASQNHRSPSC*  357
                P*   Y T  V+T H+N H  Q+A       TG+PKD GFQESQ      L  L  A      P+ **D   TSN SHH GKD  H+W+L  EPT *  QNH+ PSC*
Subject    506  P*VGIYRTKAVSTSHSNCHLEQKAIGYY*LCTGRPKD*GFQESQPAPLEELLQLPRAYLAWQHPKN**DR*LTSNESHHAGKDS*HQWKLRAEPTS*VCQNHQYPSC*  829

Range 6: 510 to 776 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
77.6 bits(163) 0.0 45/89(51%) 0/89(0%) Plus/Plus
Query       38  QEGDR*F*LAQKVGSSCNLHRCKKSFPS**DPLLVYT*SHYLSGGGQTQHASCNGCNTP*NPCWLS*KPKSLGLPV*NF*GSNALCPGW  304
                QEG  *F*  Q+VGS+ N H C +SFP+**D LLV   SH   G  Q ++A  N  N+     WLS*KP+SLGLPV + *   A C  W
Subject    510  QEGYW*F*HTQEVGSARNFHWC*ESFPA**DSLLVNQRSH*FFGCCQAKYALGNCSNSSRGAGWLS*KPQSLGLPVQSQ**PIAFCSRW  776

Range 7: 473 to 670 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.1 bits(116) 0.0 33/66(50%) 0/66(0%) Plus/Plus
Query        1  **ALVTSLTMLSARRGSVILTRSKSWFLV*SPPVQEIFSFMMRSITGLYVISLPFWRWSDPTCFLQ  198
                ** LV +     ARR  VILT S  WF  * P V  IFS MMR ITG   ISL FW      C  Q
Subject    473  **VLVVNPVKSLARRVLVILTHSGGWFRA*FPLVLGIFSCMMRFITGQSAISLIFWMLPSQVCSWQ  670

Nucleotide Sequence (347 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 33 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
35
70
105
140
175
210
245
280
315
347

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate SK704 A, complete genome

Sequence ID: KX274274.1 Length: 8725 Number of Matches: 6

Range 1: 5755 to 6081 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
234.8 bits(506) 0.0 99/109(91%) 0/109(0%) Minus/Plus
Query        1  VLGVFGPELGYIEKKLMQALKPNFYIHSGIGFDELNEWVRVRGFTDVCTESGYEAFDASQDHFILAFELQIMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS  327
                VL  F P + YIEKKLMQALKPNFYIHSG G DELNEWVR RGFTDVCTES YEAFDASQDHFILAFELQIMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS
Subject   5755  VLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVRTRGFTDVCTESDYEAFDASQDHFILAFELQIMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS  6081

Range 2: 5784 to 6080 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
219.6 bits(473) 0.0 95/99(96%) 0/99(0%) Plus/Minus
Query        2  LASPVNLIIAKEPSFEPR*ILMNS*SKIRSSGSPKNLMICSSNAKMKWSWDASKAS*PDSVHTSVKPLTLTHSFSSSKPMPE*M*KLGFNACMSFFSMY  298
                LASPVNLIIAKEPSFEPR*ILMNS*SKIRSSGSPKNLMICSSNAKMKWSWDASKAS* DSVHTSVKPL LTHSFSSS+P+PE*M*KLGFNACMSFFSMY
Subject   5784  LASPVNLIIAKEPSFEPR*ILMNS*SKIRSSGSPKNLMICSSNAKMKWSWDASKAS*SDSVHTSVKPLVLTHSFSSSRPLPE*M*KLGFNACMSFFSMY  6080

Range 3: 5755 to 6081 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
212.3 bits(457) 0.0 93/109(85%) 0/109(0%) Plus/Minus
Query        1  ACLTCKSHYRKRTKL*TKMNLDELIV*N*IFRQS*KSHDLQFKCQDEMVLGCVKSFIA*LCAYICETSDPNPFI*LIKTYA*VNVEVRLQCLHELLFNVPQLRTKHTQH  327
                ACLTCKSHY KRTKL*TKMNLDELIV*+*IFRQS*KSHDLQFKCQDEMVLGCVKSFI  LC +ICETS PNPFI*LIKT+A*VNVEVRL CLHELLFNV  +R K  Q+
Subject   5755  ACLTCKSHYCKRTKL*TKMNLDELIV*D*IFRQS*KSHDLQFKCQDEMVLGCVKSFIVRLCTHICETSGPNPFI*LIKTFA*VNVEVRL*CLHELLFNVSHVRCKANQN  6081

Range 4: 5754 to 6080 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
205.0 bits(441) 0.0 91/109(83%) 0/109(0%) Minus/Plus
Query        2  CVGCVWS*VGVH*KEAHASIEA*LLHSLRHRF**AK*MG*GQRFHRCMHRVRL*SF*RIPRPFHLGI*TANHEIFRTA*RSNFRL*VHQDSSWFKAWFFCDNEIYR*GK  328
                C G + +   +H*KEAHASI+A*LLHSLR R **AK*MG* QRFHRC++RV L*SF*RIPRPFHLGI*TANHEIFRTA*RSN RL*VHQDSSWFKAWFFC+NEIYR*GK
Subject   5754  CFGSLCTLHAIH*KEAHASIKA*LLHSLRQRS**AK*MG*DQRFHRCVYRVGL*SF*RIPRPFHLGI*TANHEIFRTA*RSNLRL*VHQDSSWFKAWFFCNNEIYR*GK  6080

Range 5: 5759 to 6079 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
192.6 bits(414) 0.0 91/107(85%) 0/107(0%) Plus/Minus
Query        3  LPHL*ISLSQKNQALNQDES**THSLKLDLQAVLKIS*FAVQMPR*NGLGMRQKLHSLTLCIHL*NL*P*PIHLAHQNLCLSECRS*ASMLA*ASFQCTPTQDQTHP  323
                LPHL*ISL QKNQALNQDES**THSL+LDLQAVLKIS*FAVQMPR*NGLGMRQKLHS TL  HL*NL  *PIHLAHQ+LCLSECRS*A MLA*ASFQC   + Q+ P
Subject   5759  LPHL*ISLLQKNQALNQDES**THSLRLDLQAVLKIS*FAVQMPR*NGLGMRQKLHSPTLYTHL*NLWS*PIHLAHQDLCLSECRS*ALMLA*ASFQCIACKVQSEP  6079

Range 6: 5759 to 6028 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
168.8 bits(362) 0.0 77/90(86%) 0/90(0%) Minus/Plus
Query       54  WVCLVLSWGTLKRSSCKH*SLTSTFTQA*VLMS*MNGLGSEVSQMYAQSQAMKLLTHPKTISSWHLNCKS*DF*DCLKI*F*TMSSSRFI  323
                W  L L+  TLKRSSCKH*SLTSTFTQA VLMS*MNGLG EVSQM  QS+ MKLLTHPKTISSWHLNCKS*DF*DCLKI* *TMSSSRFI
Subject   5759  WFALHLTCDTLKRSSCKH*SLTSTFTQAKVLMS*MNGLGPEVSQMCVQSRTMKLLTHPKTISSWHLNCKS*DF*DCLKI*S*TMSSSRFI  6028

Grapevine rupestris stem pitting associated virus strain GR4 RNA dependent RNA polymerase gene, partial cds

Sequence ID: JN683374.1 Length: 476 Number of Matches: 6

Range 1: 52 to 378 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
232.5 bits(501) 0.0 98/109(90%) 0/109(0%) Minus/Plus
Query        1  VLGVFGPELGYIEKKLMQALKPNFYIHSGIGFDELNEWVRVRGFTDVCTESGYEAFDASQDHFILAFELQIMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS  327
                VL  F P + YIEKKLMQALKPNFYIHSG G DEL+EWVR RGFTDVCTES YEAFDASQDHFILAFELQIMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS
Subject     52  VLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELDEWVRARGFTDVCTESDYEAFDASQDHFILAFELQIMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS  378

Range 2: 52 to 378 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
220.1 bits(474) 0.0 95/109(87%) 0/109(0%) Plus/Minus
Query        1  ACLTCKSHYRKRTKL*TKMNLDELIV*N*IFRQS*KSHDLQFKCQDEMVLGCVKSFIA*LCAYICETSDPNPFI*LIKTYA*VNVEVRLQCLHELLFNVPQLRTKHTQH  327
                ACLTCKSHYRKRTKL*TKMNLDELIV*N*IFRQS*KSHDLQF+CQ+EMVLGCVKSFI *LCAYICETS PNPFI*LIKT+A*VNVEVRL CLHELLFN+  +R K  Q+
Subject     52  ACLTCKSHYRKRTKL*TKMNLDELIV*N*IFRQS*KSHDLQFECQNEMVLGCVKSFIV*LCAYICETSGPNPFI*LIKTFA*VNVEVRL*CLHELLFNISHVRCKANQN  378

Range 3: 81 to 377 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
214.1 bits(461) 0.0 93/99(94%) 0/99(0%) Plus/Minus
Query        2  LASPVNLIIAKEPSFEPR*ILMNS*SKIRSSGSPKNLMICSSNAKMKWSWDASKAS*PDSVHTSVKPLTLTHSFSSSKPMPE*M*KLGFNACMSFFSMY  298
                LASPVNLIIAKEPSFEPR*ILMNS*SKIRSSGSPKNLMICSSNAKMKWSWDASKAS* DSVHTSVKPL LTHS SSS+P+PE*M*KLGFNACMSFFS+Y
Subject     81  LASPVNLIIAKEPSFEPR*ILMNS*SKIRSSGSPKNLMICSSNAKMKWSWDASKAS*SDSVHTSVKPLALTHSSSSSRPLPE*M*KLGFNACMSFFSIY  377

Range 4: 51 to 377 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
212.8 bits(458) 0.0 93/109(85%) 0/109(0%) Minus/Plus
Query        2  CVGCVWS*VGVH*KEAHASIEA*LLHSLRHRF**AK*MG*GQRFHRCMHRVRL*SF*RIPRPFHLGI*TANHEIFRTA*RSNFRL*VHQDSSWFKAWFFCDNEIYR*GK  328
                C G + +   ++*KEAHASI+A*LLHSLR R **A+*MG*GQRFHRCMHRVRL*SF*RIPRPFH GI TANHEIFRTA*RSNFRL*VHQDSSWFKAWFFCDNEIYR*GK
Subject     51  CFGSLCTLHAIY*KEAHASIKA*LLHSLRQRS**AR*MG*GQRFHRCMHRVRL*SF*RIPRPFHFGIRTANHEIFRTA*RSNFRL*VHQDSSWFKAWFFCDNEIYR*GK  377

Range 5: 56 to 376 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
202.7 bits(436) 0.0 94/107(88%) 0/107(0%) Plus/Minus
Query        3  LPHL*ISLSQKNQALNQDES**THSLKLDLQAVLKIS*FAVQMPR*NGLGMRQKLHSLTLCIHL*NL*P*PIHLAHQNLCLSECRS*ASMLA*ASFQCTPTQDQTHP  323
                LPHL*ISLSQKNQALNQDES**THSLKLDLQAVLKIS*FAV+MP+*NGLGMRQKLHSLTLCIHL*NL P*PIHLAHQ+LCLSECRS*A MLA*ASFQ    + Q+ P
Subject     56  LPHL*ISLSQKNQALNQDES**THSLKLDLQAVLKIS*FAVRMPK*NGLGMRQKLHSLTLCIHL*NLWP*PIHLAHQDLCLSECRS*ALMLA*ASFQYIACKVQSEP  376

Range 6: 56 to 325 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
172.0 bits(369) 0.0 78/90(87%) 0/90(0%) Minus/Plus
Query       54  WVCLVLSWGTLKRSSCKH*SLTSTFTQA*VLMS*MNGLGSEVSQMYAQSQAMKLLTHPKTISSWHLNCKS*DF*DCLKI*F*TMSSSRFI  323
                W  L L+   LKRSSCKH*SLTSTFTQA VLMS*MNGLG EVSQMYAQSQ MKLLTHPKTIS WH NCKS*DF*DCLKI*F*TMSSSRFI
Subject     56  WFALHLTCDILKRSSCKH*SLTSTFTQAKVLMS*MNGLGPEVSQMYAQSQTMKLLTHPKTISFWHSNCKS*DF*DCLKI*F*TMSSSRFI  325

Grapevine rupestris stem pitting associated virus isolate CS BR, complete genome

Sequence ID: KX958435.1 Length: 8743 Number of Matches: 6

Range 1: 5756 to 6082 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
231.5 bits(499) 0.0 98/109(90%) 0/109(0%) Minus/Plus
Query        1  VLGVFGPELGYIEKKLMQALKPNFYIHSGIGFDELNEWVRVRGFTDVCTESGYEAFDASQDHFILAFELQIMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS  327
                VL  F P + YIEKKLMQALKPNFYIHSG G DELNEWVR RGFT VCTES YEAFDASQDHFILAFELQIMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS
Subject   5756  VLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVRARGFTGVCTESDYEAFDASQDHFILAFELQIMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS  6082

Range 2: 5785 to 6081 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
212.3 bits(457) 0.0 91/99(92%) 0/99(0%) Plus/Minus
Query        2  LASPVNLIIAKEPSFEPR*ILMNS*SKIRSSGSPKNLMICSSNAKMKWSWDASKAS*PDSVHTSVKPLTLTHSFSSSKPMPE*M*KLGFNACMSFFSMY  298
                LASPVNLIIAKEPSFEPR*ILMNS*S+IRSSGSPKNL+ICSSNAKMKWSWDASKAS* DSVHT VKPL LTHSFSSS+P+PE*+*KLGFNACMSFFSMY
Subject   5785  LASPVNLIIAKEPSFEPR*ILMNS*SRIRSSGSPKNLIICSSNAKMKWSWDASKAS*SDSVHTPVKPLALTHSFSSSRPLPE*I*KLGFNACMSFFSMY  6081

Range 3: 5756 to 6082 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
203.6 bits(438) 0.0 87/109(80%) 0/109(0%) Plus/Minus
Query        1  ACLTCKSHYRKRTKL*TKMNLDELIV*N*IFRQS*KSHDLQFKCQDEMVLGCVKSFIA*LCAYICETSDPNPFI*LIKTYA*VNVEVRLQCLHELLFNVPQLRTKHTQH  327
                ACLTCKSHYR+R KL*TKMN DE IV N*IF QS*KSH+LQFKCQDEMVLGC+KSFI *LCAY CETS PNPFI*LIKT+A*VN+EV  QCLHELLFNV  +R K  Q+
Subject   5756  ACLTCKSHYRERAKL*TKMNFDEFIVQN*IFWQS*KSHNLQFKCQDEMVLGCIKSFIV*LCAYTCETSCPNPFI*LIKTFA*VNIEVGFQCLHELLFNVSHVRCKANQN  6082

Range 4: 5755 to 6081 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
184.4 bits(396) 0.0 84/109(77%) 0/109(0%) Minus/Plus
Query        2  CVGCVWS*VGVH*KEAHASIEA*LLHSLRHRF**AK*MG*GQRFHRCMHRVRL*SF*RIPRPFHLGI*TANHEIFRTA*RSNFRL*VHQDSSWFKAWFFCDNEIYR*GK  328
                C G + +   +H*KEAHASIE  LL+SLR R **AK*MG*G+RFHRCMHRVRL*SF* IP PFHLGI*TAN+EIFRTA RSN  L*+HQ+SSWFKAW F DNEIYR*GK
Subject   5755  CFGSLCTLHAIH*KEAHASIETQLLYSLRQRS**AK*MG*GKRFHRCMHRVRL*SF*CIPGPFHLGI*TANYEIFRTARRSNSGL*IHQNSSWFKAWLFRDNEIYR*GK  6081

Range 5: 5760 to 6080 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
181.1 bits(389) 0.0 86/107(80%) 0/107(0%) Plus/Minus
Query        3  LPHL*ISLSQKNQALNQDES**THSLKLDLQAVLKIS*FAVQMPR*NGLGMRQKLHSLTLCIHL*NL*P*PIHLAHQNLCLSECRS*ASMLA*ASFQCTPTQDQTHP  323
                LPHL*ISLS+K+QALNQDE ** HS +LDL AVLKIS*FAVQMPR*NG GM QKLHSLTLCIHL*NL P*PIHLAHQ+LCLSE RS  SMLA*ASFQC   + Q+ P
Subject   5760  LPHL*ISLSRKSQALNQDEF**IHSPELDLLAVLKIS*FAVQMPR*NGPGMHQKLHSLTLCIHL*NLLP*PIHLAHQDLCLSEYRSWVSMLA*ASFQCIACKVQSEP  6080

Range 6: 5760 to 6029 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
156.9 bits(336) 0.0 70/90(78%) 0/90(0%) Minus/Plus
Query       54  WVCLVLSWGTLKRSSCKH*SLTSTFTQA*VLMS*MNGLGSEVSQMYAQSQAMKLLTHPKTISSWHLNCKS*DF*DCLKI*F*TMSSSRFI  323
                W  L L+  TLKRSSCKH*+ TS FTQA VLMS*MNGLG EVSQ+YAQSQ MKLL HP+TISSWHLNCK *DF*DC KI*F TM+SS+FI
Subject   5760  WFALHLTCDTLKRSSCKH*NPTSIFTQAKVLMS*MNGLGQEVSQVYAQSQTMKLLMHPRTISSWHLNCKL*DF*DCQKI*FWTMNSSKFI  6029

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: Ham1

Sequence ID: AB277788.1 Length: 2876 Number of Matches: 6

Range 1: 11 to 337 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
231.1 bits(498) 0.0 97/109(89%) 0/109(0%) Minus/Plus
Query        1  VLGVFGPELGYIEKKLMQALKPNFYIHSGIGFDELNEWVRVRGFTDVCTESGYEAFDASQDHFILAFELQIMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS  327
                VL  F P + YIEKKLMQALKPNFYIHSG G DELNEWVR RGFT VCTES YEAFDASQDHFILAFELQ+MRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS
Subject     11  VLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVRARGFTGVCTESDYEAFDASQDHFILAFELQVMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS  337

Range 2: 40 to 336 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
201.8 bits(434) 0.0 88/99(89%) 0/99(0%) Plus/Minus
Query        2  LASPVNLIIAKEPSFEPR*ILMNS*SKIRSSGSPKNLMICSSNAKMKWSWDASKAS*PDSVHTSVKPLTLTHSFSSSKPMPE*M*KLGFNACMSFFSMY  298
                LASPVNLIIAKEPSF+PR*ILMNS*SKIRSSGSPKNLM CSSNA+MK SWDASKAS* DSVHT VKPL LTHSFSSS+P+PE*M*K GFNAC+SFFSMY
Subject     40  LASPVNLIIAKEPSFDPR*ILMNS*SKIRSSGSPKNLMTCSSNARMK*SWDASKAS*SDSVHTPVKPLALTHSFSSSRPLPE*M*KFGFNACISFFSMY  336

Range 3: 11 to 334 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
176.6 bits(379) 0.0 75/108(69%) 0/108(0%) Plus/Minus
Query        4  CLTCKSHYRKRTKL*TKMNLDELIV*N*IFRQS*KSHDLQFKCQDEMVLGCVKSFIA*LCAYICETSDPNPFI*LIKTYA*VNVEVRLQCLHELLFNVPQLRTKHTQH  327
                CLTC+SH  KR KL* KMN DELI+*+ IF QS*KSHDLQFKCQDEM+LGC+KSFI *LC + CETS  NPFI*LIKT+A +NVE+  QCLH+LLFNV  +  K  Q+
Subject     11  CLTCESHNCKRAKL*PKMNFDELII*DQIFWQS*KSHDLQFKCQDEMILGCIKSFIV*LCTHTCETSSSNPFI*LIKTFARMNVEIWFQCLHKLLFNVSHVGCKANQN  334

Range 4: 15 to 335 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
156.9 bits(336) 0.0 77/107(72%) 0/107(0%) Plus/Minus
Query        3  LPHL*ISLSQKNQALNQDES**THSLKLDLQAVLKIS*FAVQMPR*NGLGMRQKLHSLTLCIHL*NL*P*PIHLAHQNLCLSECRS*ASMLA*ASFQCTPTQDQTHP  323
                LPHL*IS  QK+QAL QDE **TH+L+ DL AVLKIS* AVQMP *N LGM QKLHSLTL  HL*NL* *PIHLAHQ+LC +ECR+  SM A*ASFQC   + Q+ P
Subject     15  LPHL*IS*LQKSQALTQDEF**THNLRSDLLAVLKIS*LAVQMPG*NDLGMHQKLHSLTLYTHL*NL*L*PIHLAHQDLCQNECRNLVSMPA*ASFQCIACRVQSEP  335

Range 5: 40 to 336 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
155.9 bits(334) 0.0 72/99(73%) 0/99(0%) Minus/Plus
Query        2  VH*KEAHASIEA*LLHSLRHRF**AK*MG*GQRFHRCMHRVRL*SF*RIPRPFHLGI*TANHEIFRTA*RSNFRL*VHQDSSWFKAWFFCDNEIYR*GK  298
                +H*KEA+A IE   LHS   R **AK*MG*  RFHRC++RVRL*SF* IPR FH GI*TA+HEIFRTA RS+ RL*VHQ+SSW KAW FC+ EI+R*GK
Subject     40  IH*KEAYAGIETKFLHSFWQRS**AK*MG*S*RFHRCVYRVRL*SF*CIPRSFHPGI*TASHEIFRTARRSDLRL*VHQNSSWVKAWLFCNYEIHR*GK  336

Range 6: 15 to 284 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
132.1 bits(282) 0.0 63/90(70%) 0/90(0%) Minus/Plus
Query       54  WVCLVLSWGTLKRSSCKH*SLTSTFTQA*VLMS*MNGLGSEVSQMYAQSQAMKLLTHPKTISSWHLNCKS*DF*DCLKI*F*TMSSSRFI  323
                W  L  +  TLKRS C+H*+  STF  A VLMS*MNGL  EVSQ+  QSQ MKLL HPK ISSWHLNCKS*DF*DC KI* * MSSS+FI
Subject     15  WFALHPTCDTLKRSLCRH*NQISTFILAKVLMS*MNGLELEVSQVCVQSQTMKLLMHPKIISSWHLNCKS*DF*DCQKI*S*IMSSSKFI  284

Rupestris stem pitting associated virus isolate RSPaV PN, complete genome

Sequence ID: AY368172.2 Length: 8743 Number of Matches: 6

Range 1: 5755 to 6081 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
230.2 bits(496) 0.0 97/109(89%) 0/109(0%) Minus/Plus
Query        1  VLGVFGPELGYIEKKLMQALKPNFYIHSGIGFDELNEWVRVRGFTDVCTESGYEAFDASQDHFILAFELQIMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS  327
                VL  F P + YIEKKLMQALKPNFYIHSG G DELNEWV+ RGFT VCTES YEAFDASQDHFILAFELQIMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS
Subject   5755  VLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVKARGFTGVCTESDYEAFDASQDHFILAFELQIMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS  6081

Range 2: 5784 to 6080 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
186.6 bits(401) 0.0 83/99(84%) 0/99(0%) Plus/Minus
Query        2  LASPVNLIIAKEPSFEPR*ILMNS*SKIRSSGSPKNLMICSSNAKMKWSWDASKAS*PDSVHTSVKPLTLTHSFSSSKPMPE*M*KLGFNACMSFFSMY  298
                LASPVNLIIAKEPSF+PR*ILMNS*S+IRSSG PKNL+ICSSNA+MK S DASKAS* DSV T VKPL  THSFSSS+P+PE*M*KLGFNAC+SFFS+Y
Subject   5784  LASPVNLIIAKEPSFDPR*ILMNS*SRIRSSGKPKNLIICSSNARMK*S*DASKAS*SDSVQTPVKPLAFTHSFSSSRPLPE*M*KLGFNACISFFSIY  6080

Range 3: 5776 to 6081 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
140.8 bits(301) 0.0 60/102(59%) 0/102(0%) Plus/Minus
Query        1  ACLTCKSHYRKRTKL*TKMNLDELIV*N*IFRQS*KSHDLQFKCQDEMVLGCVKSFIA*LCAYICETSDPNPFI*LIKTYA*VNVEVRLQCLHELLFNVPQL  306
                AC TC+SHY KR +L* KMN DE I+*+*IF Q+ K H+LQFK Q+EM+L  +K FI *LCA  C+TS  +P I  I+ +A*+NV+VRLQCLH+ LFN+P +
Subject   5776  ACFTCESHYCKRAEL*PKMNFDEFII*D*IFWQTQKPHNLQFKRQNEMILRRIKGFIV*LCANTCKTSSFHPLIQFIEAFA*MNVKVRLQCLHKFLFNIPHV  6081

Range 4: 5759 to 6079 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
129.8 bits(277) 0.0 67/107(63%) 0/107(0%) Plus/Minus
Query        3  LPHL*ISLSQKNQALNQDES**THSLKLDLQAVLKIS*FAVQMPR*NGLGMRQKLHSLTLCIHL*NL*P*PIHLAHQNLCLSECRS*ASMLA*ASFQCTPTQDQTHP  323
                L HL*ISL QK++AL QDE ** H+L LDL A  K S*FAVQ P *N     Q+LHSLTLC HL*NL*  P H  H+ LCL+EC+S*ASMLA* SFQ T  + ++ P
Subject   5759  LLHL*ISLLQKSRALTQDEF**IHNLGLDLLANPKTS*FAVQTPE*NDPETHQRLHSLTLCKHL*NL*LSPTHSVHRGLCLNECKS*ASMLA*VSFQYTSCRARSGP  6079

Range 5: 5784 to 6080 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
129.8 bits(277) 0.0 62/99(63%) 0/99(0%) Minus/Plus
Query        2  VH*KEAHASIEA*LLHSLRHRF**AK*MG*GQRFHRCMHRVRL*SF*RIPRPFHLGI*TANHEIFRTA*RSNFRL*VHQDSSWFKAWFFCDNEIYR*GK  298
                V+*KE +ASIEA*LLHS R R  * +*+G   RF+RC+HRVRL*S * +   FH G+*TAN+E+F  A RSN RL*+HQ+SSW KA  FC+NEI+R* K
Subject   5784  VY*KETYASIEA*LLHSFRQRPR*TE*VGES*RFYRCLHRVRL*SL*CVSGSFHSGV*TANYEVFGFARRSNPRL*IHQNSSWVKARLFCNNEIHR*SK  6080

Range 6: 5783 to 6028 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
93.2 bits(197) 0.0 48/82(59%) 0/82(0%) Minus/Plus
Query       54  GTLKRSSCKH*SLTSTFTQA*VLMS*MNGLGSEVSQMYAQSQAMKLLTHPKTISSWHLNCKS*DF*DCLKI*F*TMSSSRFI  299
                G LKR+ CKH*SLT TF QA   M+*M+G   EV Q++AQSQ MK L   + IS W LNCK * F  C KI* * M+SS+FI
Subject   5783  GILKRNLCKH*SLTFTFIQAKASMN*MSG*KLEVLQVFAQSQTMKPLMRLRIISFWRLNCKL*GFWVCQKI*S*IMNSSKFI  6028

Nucleotide Sequence (325 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 33 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
33
66
99
132
165
198
231
264
297
325

Descriptions

Alignments

Rupestris stem pitting associated virus strain BS, complete genome

Sequence ID: AY881627.1 Length: 8743 Number of Matches: 6

Range 1: 2227 to 2514 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
234.8 bits(506) 0.0 94/96(98%) 0/96(0%) Minus/Plus
Query        3  DFNWVVRNIGFEDRLKGRGASFFSKPGISRYSYNGGSHTSLGWPKFMDQILSSTGGRNYYNSCLAQIYEENSKLALHKDDESCYETGLKVLTVNLI  290
                DFNWVVRNIGFEDRLKGRGASFFSKPGISRYSYNGGSHTSLGWPKFMDQILSSTGGRNYYNSCL QIYEENSKLALHKDDESCYETG KVLTVNLI
Subject   2227  DFNWVVRNIGFEDRLKGRGASFFSKPGISRYSYNGGSHTSLGWPKFMDQILSSTGGRNYYNSCLVQIYEENSKLALHKDDESCYETGHKVLTVNLI  2514

Range 2: 2226 to 2516 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
232.0 bits(500) 0.0 97/97(100%) 0/97(0%) Minus/Plus
Query        1  GFQLGGEEYWL*R*VERQGCIILLKTRDFTL*LQWWKPYKSRVA*VHGSDSKLHRWA*LLQFMPGSNL*RKFKIGPS*G**ELL*NWAQGFNCQFNW  291
                GFQLGGEEYWL*R*VERQGCIILLKTRDFTL*LQWWKPYKSRVA*VHGSDSKLHRWA*LLQFMPGSNL*RKFKIGPS*G**ELL*NWAQGFNCQFNW
Subject   2226  GFQLGGEEYWL*R*VERQGCIILLKTRDFTL*LQWWKPYKSRVA*VHGSDSKLHRWA*LLQFMPGSNL*RKFKIGPS*G**ELL*NWAQGFNCQFNW  2516

Range 3: 2228 to 2515 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
216.9 bits(467) 0.0 94/96(98%) 0/96(0%) Minus/Plus
Query        2  ISTGW*GILALKIG*KAGVHHSSQNQGFHVIATMVEAIQV*GGLSSWIRF*APPVGVTTTIHAWLKSMKKIQNWPFIRMMRVAMKLGSRF*LSI*L  289
                ISTGW*GILALKIG*KAGVHHSSQNQGFHVIATMVEAIQV*GGLSSWIRF*APPVGVTTTIHAW KSMKKIQNWPFIRMMRVAMKLG+RF*LSI*L
Subject   2228  ISTGW*GILALKIG*KAGVHHSSQNQGFHVIATMVEAIQV*GGLSSWIRF*APPVGVTTTIHAWFKSMKKIQNWPFIRMMRVAMKLGTRF*LSI*L  2515

Range 4: 2227 to 2514 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
212.3 bits(457) 0.0 94/96(98%) 0/96(0%) Plus/Minus
Query        3  N*IDS*NLEPSFIATLIILMKGQF*IFFIDLSQA*IVVVTPTGGA*NLIHELRPP*TCMASTIVAIT*NPWF*EE*CTPAFQPIFKANIPHHPVEI  290
                N*IDS*NL PSFIATLIILMKGQF*IFFIDL+QA*IVVVTPTGGA*NLIHELRPP*TCMASTIVAIT*NPWF*EE*CTPAFQPIFKANIPHHPVEI
Subject   2227  N*IDS*NLVPSFIATLIILMKGQF*IFFIDLNQA*IVVVTPTGGA*NLIHELRPP*TCMASTIVAIT*NPWF*EE*CTPAFQPIFKANIPHHPVEI  2514

Range 5: 2276 to 2515 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
200.8 bits(432) 0.0 79/80(99%) 0/80(0%) Plus/Minus
Query        2  QLN*QLKP*AQFHSNSHHPYEGPILNFLHRFEPGMNCSSYAHRWSLESDP*T*ATLDLYGFHHCSYNVKSLVLRRMMHPC  241
                QLN*QLKP AQFHSNSHHPYEGPILNFLHRFEPGMNCSSYAHRWSLESDP*T*ATLDLYGFHHCSYNVKSLVLRRMMHPC
Subject   2276  QLN*QLKPCAQFHSNSHHPYEGPILNFLHRFEPGMNCSSYAHRWSLESDP*T*ATLDLYGFHHCSYNVKSLVLRRMMHPC  2515

Range 6: 2223 to 2453 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
150.9 bits(323) 0.0 75/77(97%) 0/77(0%) Plus/Minus
Query       64  RANFEFSS*I*ARHEL**LRPPVELRI*SMNLGHPRLVWXXXXXXXREIPGFEKNDAPLPFNLSSKPIFLTTQLKST  294
                RANFEFSS*I* RHEL**LRPPVELRI*SMNLGHPRLVWLPPL*L*REIPGFEKNDAPLPFNLSSKPIFLTTQLKS+
Subject   2223  RANFEFSS*I*TRHEL**LRPPVELRI*SMNLGHPRLVWLPPL*L*REIPGFEKNDAPLPFNLSSKPIFLTTQLKSS  2453

Grapevine rupestris stem pitting associated virus isolate SK30, complete genome

Sequence ID: KX274277.1 Length: 8724 Number of Matches: 6

Range 1: 2227 to 2514 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
234.8 bits(506) 0.0 94/96(98%) 0/96(0%) Minus/Plus
Query        3  DFNWVVRNIGFEDRLKGRGASFFSKPGISRYSYNGGSHTSLGWPKFMDQILSSTGGRNYYNSCLAQIYEENSKLALHKDDESCYETGLKVLTVNLI  290
                DFNWVVRNIGFEDRLKGRGASFFSKPGISRYSYNGGSHTSLGWPKFMDQILSSTGGRNYYNSCL QIYEENSKLALHKDDESCYETG KVLTVNLI
Subject   2227  DFNWVVRNIGFEDRLKGRGASFFSKPGISRYSYNGGSHTSLGWPKFMDQILSSTGGRNYYNSCLVQIYEENSKLALHKDDESCYETGHKVLTVNLI  2514

Range 2: 2226 to 2516 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
227.4 bits(490) 0.0 95/97(98%) 0/97(0%) Minus/Plus
Query        1  GFQLGGEEYWL*R*VERQGCIILLKTRDFTL*LQWWKPYKSRVA*VHGSDSKLHRWA*LLQFMPGSNL*RKFKIGPS*G**ELL*NWAQGFNCQFNW  291
                GFQLGGEEYWL*R*VERQGCIILLKTRDFTL*LQWWKPYKSRVA*VHGSDSKLHRWA*LLQFMPGSNL*RKFKIGPS*G *ELL*NWAQGFNCQF+W
Subject   2226  GFQLGGEEYWL*R*VERQGCIILLKTRDFTL*LQWWKPYKSRVA*VHGSDSKLHRWA*LLQFMPGSNL*RKFKIGPS*GR*ELL*NWAQGFNCQFDW  2516

Range 3: 2228 to 2515 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
214.1 bits(461) 0.0 93/96(97%) 0/96(0%) Minus/Plus
Query        2  ISTGW*GILALKIG*KAGVHHSSQNQGFHVIATMVEAIQV*GGLSSWIRF*APPVGVTTTIHAWLKSMKKIQNWPFIRMMRVAMKLGSRF*LSI*L  289
                ISTGW*GILALKIG*KAGVHHSSQNQGFHVIATMVEAIQV*GGLSSWIRF*APPVGVTTTIHAW KSMKKIQNWPFIR MRVAMKLG+RF*LSI*L
Subject   2228  ISTGW*GILALKIG*KAGVHHSSQNQGFHVIATMVEAIQV*GGLSSWIRF*APPVGVTTTIHAWFKSMKKIQNWPFIRTMRVAMKLGTRF*LSI*L  2515

Range 4: 2227 to 2514 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
209.6 bits(451) 0.0 92/96(96%) 0/96(0%) Plus/Minus
Query        3  N*IDS*NLEPSFIATLIILMKGQF*IFFIDLSQA*IVVVTPTGGA*NLIHELRPP*TCMASTIVAIT*NPWF*EE*CTPAFQPIFKANIPHHPVEI  290
                N IDS*NL PSFIATLI+LMKGQF*IFFIDL+QA*IVVVTPTGGA*NLIHELRPP*TCMASTIVAIT*NPWF*EE*CTPAFQPIFKANIPHHPVEI
Subject   2227  NQIDS*NLVPSFIATLIVLMKGQF*IFFIDLNQA*IVVVTPTGGA*NLIHELRPP*TCMASTIVAIT*NPWF*EE*CTPAFQPIFKANIPHHPVEI  2514

Range 5: 2276 to 2515 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.4 bits(418) 0.0 77/80(96%) 0/80(0%) Plus/Minus
Query        2  QLN*QLKP*AQFHSNSHHPYEGPILNFLHRFEPGMNCSSYAHRWSLESDP*T*ATLDLYGFHHCSYNVKSLVLRRMMHPC  241
                Q N*QLKP AQFHSNSH PYEGPILNFLHRFEPGMNCSSYAHRWSLESDP*T*ATLDLYGFHHCSYNVKSLVLRRMMHPC
Subject   2276  QSN*QLKPCAQFHSNSHRPYEGPILNFLHRFEPGMNCSSYAHRWSLESDP*T*ATLDLYGFHHCSYNVKSLVLRRMMHPC  2515

Range 6: 2223 to 2453 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
150.9 bits(323) 0.0 75/77(97%) 0/77(0%) Plus/Minus
Query       64  RANFEFSS*I*ARHEL**LRPPVELRI*SMNLGHPRLVWXXXXXXXREIPGFEKNDAPLPFNLSSKPIFLTTQLKST  294
                RANFEFSS*I* RHEL**LRPPVELRI*SMNLGHPRLVWLPPL*L*REIPGFEKNDAPLPFNLSSKPIFLTTQLKS+
Subject   2223  RANFEFSS*I*TRHEL**LRPPVELRI*SMNLGHPRLVWLPPL*L*REIPGFEKNDAPLPFNLSSKPIFLTTQLKSS  2453

Grapevine rupestris stem pitting associated virus isolate Tannat Rspav1, complete genome

Sequence ID: KR528585.1 Length: 8595 Number of Matches: 6

Range 1: 2209 to 2496 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
225.6 bits(486) 0.0 89/96(93%) 0/96(0%) Minus/Plus
Query        3  DFNWVVRNIGFEDRLKGRGASFFSKPGISRYSYNGGSHTSLGWPKFMDQILSSTGGRNYYNSCLAQIYEENSKLALHKDDESCYETGLKVLTVNLI  290
                +FNWVV+NIGF+DRL+GRGASFFSKPGIS YSYNGGSHTSLGWPKFMDQILSSTGGRNYYNSCLAQIYEENSKLALHKDDESCYETG KVLT+NLI
Subject   2209  NFNWVVKNIGFKDRLRGRGASFFSKPGISCYSYNGGSHTSLGWPKFMDQILSSTGGRNYYNSCLAQIYEENSKLALHKDDESCYETGHKVLTINLI  2496

Range 2: 2210 to 2494 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
158.2 bits(339) 0.0 71/95(75%) 0/95(0%) Minus/Plus
Query        5  ISTGW*GILALKIG*KAGVHHSSQNQGFHVIATMVEAIQV*GGLSSWIRF*APPVGVTTTIHAWLKSMKKIQNWPFIRMMRVAMKLGSRF*LSI*  289
                I TGW*  L L+ G*+AGVHHSSQNQ FHVI TMV A   *GG SSWIRF*AP   V TTIHAWL+SM+KIQNW FIRMMRVAMKLG++F*L I*
Subject   2210  ILTGW*RTLVLRTG*EAGVHHSSQNQEFHVIVTMVGATLA*GGQSSWIRF*APLADVITTIHAWLRSMRKIQNWLFIRMMRVAMKLGTKF*LLI*  2494

Range 3: 2211 to 2495 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
155.0 bits(332) 0.0 72/95(76%) 0/95(0%) Minus/Plus
Query        4  FQLGGEEYWL*R*VERQGCIILLKTRDFTL*LQWWKPYKSRVA*VHGSDSKLHRWA*LLQFMPGSNL*RKFKIGPS*G**ELL*NWAQGFNCQFN  288
                F LGGEE+W *   ERQGCIILLKTR+F L*LQWW+P+  RVA VHGSDSKLH   *LLQFMPGS+L* KFKIG S*G**ELL*NWAQ F+  FN
Subject   2211  F*LGGEEHWF*GQAERQGCIILLKTRNFML*LQWWEPH*LRVAKVHGSDSKLHWRT*LLQFMPGSDL*GKFKIGSS*G**ELL*NWAQSFDY*FN  2495

Range 4: 2209 to 2496 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
154.6 bits(331) 0.0 71/96(74%) 0/96(0%) Plus/Minus
Query        3  N*IDS*NLEPSFIATLIILMKGQF*IFFIDLSQA*IVVVTPTGGA*NLIHELRPP*TCMASTIVAIT*NPWF*EE*CTPAFQPIFKANIPHHPVEI  290
                +*I+S N  PSFIATLIILMK QF*IF IDLSQA*IVV+T   GA*NLIHEL PP*  +A TIV IT*N WF*EE*CTPA QP+ K N+ HHPV+I
Subject   2209  D*INSQNFVPSFIATLIILMKSQF*IFLIDLSQA*IVVITSASGA*NLIHELWPP*ASVAPTIVTIT*NSWF*EE*CTPASQPVLKTNVLHHPVKI  2496

Range 5: 2258 to 2497 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
146.3 bits(313) 0.0 60/80(75%) 0/80(0%) Plus/Minus
Query        2  QLN*QLKP*AQFHSNSHHPYEGPILNFLHRFEPGMNCSSYAHRWSLESDP*T*ATLDLYGFHHCSYNVKSLVLRRMMHPC  241
                +LN*  K  AQFHSNSHHPYE PILNF HR EPGMNCS+Y  +WSLESDP*T ATL   G HHC+YN+K LVLRRMMHPC
Subject   2258  RLN**SKLCAQFHSNSHHPYEEPILNFPHRSEPGMNCSNYVRQWSLESDP*TLATLS*CGSHHCNYNMKFLVLRRMMHPC  2497

Range 6: 2211 to 2435 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
133.9 bits(286) 0.0 67/75(89%) 0/75(0%) Plus/Minus
Query       64  RANFEFSS*I*ARHEL**LRPPVELRI*SMNLGHPRLVWXXXXXXXREIPGFEKNDAPLPFNLSSKPIFLTTQLK  288
                RANFEFSS*I*ARHEL**LRPPVELRI*SMN GHP+LVWLPPL*L* EIPGFEKNDAPLP +LS KP+F TTQLK
Subject   2211  RANFEFSS*I*ARHEL**LRPPVELRI*SMNFGHPKLVWLPPL*L*HEIPGFEKNDAPLPLSLSLKPMFFTTQLK  2435

Grapevine Rupestris stem pitting associated virus, complete genome

Sequence ID: AF026278.1 Length: 8725 Number of Matches: 6

Range 1: 2227 to 2514 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
225.1 bits(485) 0.0 89/96(93%) 0/96(0%) Minus/Plus
Query        3  DFNWVVRNIGFEDRLKGRGASFFSKPGISRYSYNGGSHTSLGWPKFMDQILSSTGGRNYYNSCLAQIYEENSKLALHKDDESCYETGLKVLTVNLI  290
                DFNWVV+NIGF+DRL+GRGASFFSKPGIS YSYNGGSHTSLGWPKFMDQILSSTGGRNYYNSCLAQIYEENSKLALHKDDESCYE G KVLT+NLI
Subject   2227  DFNWVVKNIGFKDRLRGRGASFFSKPGISCYSYNGGSHTSLGWPKFMDQILSSTGGRNYYNSCLAQIYEENSKLALHKDDESCYEIGHKVLTINLI  2514

Range 2: 2228 to 2512 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
162.8 bits(349) 0.0 73/95(77%) 0/95(0%) Minus/Plus
Query        5  ISTGW*GILALKIG*KAGVHHSSQNQGFHVIATMVEAIQV*GGLSSWIRF*APPVGVTTTIHAWLKSMKKIQNWPFIRMMRVAMKLGSRF*LSI*  289
                ISTGW*    LK G*+AGVHHSSQNQ FHVI TMV A Q *GG SSWIRF*AP   V TTIHAWL+SM+KIQNW FIRMMRVAMKLG++F*L I*
Subject   2228  ISTGW*RTSVLKTG*EAGVHHSSQNQEFHVIVTMVGATQA*GGQSSWIRF*APLADVITTIHAWLRSMRKIQNWLFIRMMRVAMKLGTKF*LLI*  2512

Range 3: 2226 to 2513 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
160.5 bits(344) 0.0 74/96(77%) 0/96(0%) Minus/Plus
Query        4  GFQLGGEEYWL*R*VERQGCIILLKTRDFTL*LQWWKPYKSRVA*VHGSDSKLHRWA*LLQFMPGSNL*RKFKIGPS*G**ELL*NWAQGFNCQFN  291
                GFQLGGEE+  *R  ERQGCIILLKTR+F L*LQWW+P+K RVA VHGSDSKLH   *LLQFMPGS+L* KFKIG S*G**ELL*NWAQ F+  F+
Subject   2226  GFQLGGEEHRF*RQAERQGCIILLKTRNFML*LQWWEPHKLRVAKVHGSDSKLHWRT*LLQFMPGSDL*GKFKIGSS*G**ELL*NWAQSFDY*FD  2513

Range 4: 2227 to 2508 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
159.1 bits(341) 0.0 71/94(76%) 0/94(0%) Plus/Minus
Query        9  IDS*NLEPSFIATLIILMKGQF*IFFIDLSQA*IVVVTPTGGA*NLIHELRPP*TCMASTIVAIT*NPWF*EE*CTPAFQPIFKANIPHHPVEI  290
                I+S N  P+FIATLIILMK QF*IF IDLSQA*IVV+T   GA*NLIHEL PP* C+A TIV IT*N WF*EE*CTPA QP+FK ++ HHPVEI
Subject   2227  INSQNFVPNFIATLIILMKSQF*IFLIDLSQA*IVVITSASGA*NLIHELWPP*ACVAPTIVTIT*NSWF*EE*CTPASQPVFKTDVLHHPVEI  2508

Range 5: 2276 to 2488 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
148.2 bits(317) 0.0 57/71(80%) 0/71(0%) Plus/Minus
Query       29  AQFHSNSHHPYEGPILNFLHRFEPGMNCSSYAHRWSLESDP*T*ATLDLYGFHHCSYNVKSLVLRRMMHPC  241
                AQFHSNSHHPYE PILNF HR EPGMNCS+Y  +WSLESDP*T ATL L G HHC+YN+K LVLRRMMHPC
Subject   2276  AQFHSNSHHPYEEPILNFPHRSEPGMNCSNYVRQWSLESDP*TLATLSLCGSHHCNYNMKFLVLRRMMHPC  2488

Range 6: 2223 to 2453 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
136.2 bits(291) 0.0 68/77(88%) 0/77(0%) Plus/Minus
Query       64  RANFEFSS*I*ARHEL**LRPPVELRI*SMNLGHPRLVWXXXXXXXREIPGFEKNDAPLPFNLSSKPIFLTTQLKST  294
                RANFEFSS*I*ARHEL**LRPPVELRI*SMN GHP+LVWLPPL*L* EIPGFEKNDAPLP +LS KP+F TTQLKS+
Subject   2223  RANFEFSS*I*ARHEL**LRPPVELRI*SMNFGHPKLVWLPPL*L*HEIPGFEKNDAPLPLSLSLKPMFFTTQLKSS  2453

Grapevine rupestris stem pitting associated virus complete genome, isolate PG, genomic RNA

Sequence ID: HE591388.1 Length: 8725 Number of Matches: 6

Range 1: 2227 to 2514 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
225.1 bits(485) 0.0 89/96(93%) 0/96(0%) Minus/Plus
Query        3  DFNWVVRNIGFEDRLKGRGASFFSKPGISRYSYNGGSHTSLGWPKFMDQILSSTGGRNYYNSCLAQIYEENSKLALHKDDESCYETGLKVLTVNLI  290
                DFNWVV+NIGF+DRL+GRGASFFSKPGIS YSYNGGSHTSLGWPKFMDQILSSTGGRNYYNSCLAQIYEENSKLALHKDDESCYE G KVLT+NLI
Subject   2227  DFNWVVKNIGFKDRLRGRGASFFSKPGISCYSYNGGSHTSLGWPKFMDQILSSTGGRNYYNSCLAQIYEENSKLALHKDDESCYEIGHKVLTINLI  2514

Range 2: 2226 to 2513 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
162.8 bits(349) 0.0 74/96(77%) 0/96(0%) Minus/Plus
Query        4  GFQLGGEEYWL*R*VERQGCIILLKTRDFTL*LQWWKPYKSRVA*VHGSDSKLHRWA*LLQFMPGSNL*RKFKIGPS*G**ELL*NWAQGFNCQFN  291
                GF LGGEE+W *R  ERQGCIILLKTR+F L*LQWW+P+K RVA VHGSDSKLH   *LLQFMPGS+L* KFKIG S*G**ELL*NWAQ F+  F+
Subject   2226  GF*LGGEEHWF*RQAERQGCIILLKTRNFML*LQWWEPHKLRVAKVHGSDSKLHWRT*LLQFMPGSDL*GKFKIGSS*G**ELL*NWAQSFDY*FD  2513

Range 3: 2228 to 2512 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
162.8 bits(349) 0.0 73/95(77%) 0/95(0%) Minus/Plus
Query        5  ISTGW*GILALKIG*KAGVHHSSQNQGFHVIATMVEAIQV*GGLSSWIRF*APPVGVTTTIHAWLKSMKKIQNWPFIRMMRVAMKLGSRF*LSI*  289
                I TGW*  L LK G*+AGVHHSSQNQ FHVI TMV A Q *GG SSWIRF*AP   V TTIHAWL+SM+KIQNW FIRMMRVAMKLG++F*L I*
Subject   2228  ILTGW*RTLVLKTG*EAGVHHSSQNQEFHVIVTMVGATQA*GGQSSWIRF*APLADVITTIHAWLRSMRKIQNWLFIRMMRVAMKLGTKF*LLI*  2512

Range 4: 2227 to 2508 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
159.6 bits(342) 0.0 71/94(76%) 0/94(0%) Plus/Minus
Query        9  IDS*NLEPSFIATLIILMKGQF*IFFIDLSQA*IVVVTPTGGA*NLIHELRPP*TCMASTIVAIT*NPWF*EE*CTPAFQPIFKANIPHHPVEI  290
                I+S N  P+FIATLIILMK QF*IF IDLSQA*IVV+T   GA*NLIHEL PP* C+A TIV IT*N WF*EE*CTPA QP+FK N+ HHPV+I
Subject   2227  INSQNFVPNFIATLIILMKSQF*IFLIDLSQA*IVVITSASGA*NLIHELWPP*ACVAPTIVTIT*NSWF*EE*CTPASQPVFKTNVLHHPVKI  2508

Range 5: 2276 to 2488 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
148.2 bits(317) 0.0 57/71(80%) 0/71(0%) Plus/Minus
Query       29  AQFHSNSHHPYEGPILNFLHRFEPGMNCSSYAHRWSLESDP*T*ATLDLYGFHHCSYNVKSLVLRRMMHPC  241
                AQFHSNSHHPYE PILNF HR EPGMNCS+Y  +WSLESDP*T ATL L G HHC+YN+K LVLRRMMHPC
Subject   2276  AQFHSNSHHPYEEPILNFPHRSEPGMNCSNYVRQWSLESDP*TLATLSLCGSHHCNYNMKFLVLRRMMHPC  2488

Range 6: 2223 to 2453 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
136.2 bits(291) 0.0 68/77(88%) 0/77(0%) Plus/Minus
Query       64  RANFEFSS*I*ARHEL**LRPPVELRI*SMNLGHPRLVWXXXXXXXREIPGFEKNDAPLPFNLSSKPIFLTTQLKST  294
                RANFEFSS*I*ARHEL**LRPPVELRI*SMN GHP+LVWLPPL*L* EIPGFEKNDAPLP +LS KP+F TTQLKS+
Subject   2223  RANFEFSS*I*ARHEL**LRPPVELRI*SMNFGHPKLVWLPPL*L*HEIPGFEKNDAPLPLSLSLKPMFFTTQLKSS  2453

Nucleotide Sequence (739 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 33 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
74
148
222
296
370
444
518
592
666
739

Descriptions

Alignments

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 9

Range 1: 6373 to 7110 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
553.2 bits(1201) 0.0 234/246(95%) 0/246(0%) Minus/Plus
Query        2  CIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHDVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVNDFSDFDVLFSDPYQNISVPRVALFMKSKSCRFGNNGC*FLLSFGFDVHSDRFDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKL  739
                CIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWH  IIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVNDFSDFDVLFSDPYQNISVPR A F+KSK+CRFG N C +LLSFGFDVHSDR DEVITGSPFELDVEGVLICFGKEAV+LAAAHNSDFKL
Subject   6373  CIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHY*IIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVNDFSDFDVLFSDPYQNISVPREAHFIKSKTCRFGKNTCKYLLSFGFDVHSDRSDEVITGSPFELDVEGVLICFGKEAVNLAAAHNSDFKL  7110

Range 2: 6373 to 7110 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
526.6 bits(1143) 0.0 221/246(90%) 0/246(0%) Plus/Minus
Query        2  KFEI*IMRSSQINCLLAKAN*HTLNIQLKWRTCNHFIKPVTMHIKTKG*KELTSIITKPARL*LHEESHPWNTDILIWVRE*HVKIRKVIHRQILIKYVYLPFYSAARRVWLDVPPREIWSVGNAGRKSYETLVFSDELSYQTTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHIMPNT*GLIYSFKQPRN*APHLVLISNQEPHTIVVCFNFLFIHHLN*QLAQPVGIGHLNCIIINA  739
                KFEI*IMRS Q+NCLLAKAN*HTLNIQLKW TCNHFI+PVTMHIKTKG*K LT I  KPA L*L+E S PWNTDILIWVRE*HVKIRKVIHRQILI+YVYLPFYS  RRVWLDVPPR++WSVGNAGR+SYETLVFS+ELSYQTTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNN IMPNT*GLIYSFKQ RN*A HLVLISNQEPHT+VV FNFLFIHH N*QLAQPVGIGHLNCIIINA
Subject   6373  KFEI*IMRSCQVNCLLAKAN*HTLNIQLKW*TCNHFIRPVTMHIKTKG*KVLTCIFAKPAGL*LYEVSLPWNTDILIWVRE*HVKIRKVIHRQILIEYVYLPFYSTTRRVWLDVPPRKVWSVGNAGRESYETLVFSNELSYQTTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNLIMPNT*GLIYSFKQSRN*ASHLVLISNQEPHTVVVRFNFLFIHHFN*QLAQPVGIGHLNCIIINA  7110

Range 3: 6374 to 7111 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
516.1 bits(1120) 0.0 219/246(89%) 0/246(0%) Plus/Minus
Query        1  EV*NLNYAQQPNQLPPCQSKLAHPQHPTQMENL*SLHQTCHYAHQNQRIEGTNIHYYQTCKTLTS*REPPLEH*YFDMGQRIARQNQKSHSQTDTHQVCLSSLLQRSQESMA*CTSQRDLECRERRP*KL*NSRLQ**ALLSNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*PGTAHNCSVLQLPLHSSSQLTTRPACRHRTPQLHNYQC  738
                EV*NLNYAQ P+ LPPCQSKLAHPQHPTQM NL*SLHQTCHYAHQNQRIEGT +++ QTC++LT * EPPLEH*YFDMGQRI RQNQKSHSQTDTH+VCLSSLLQ +QESMA*CTSQ+ LECRERRP*KL*NSRLQ**ALLSNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**S++AKHLRPNL*LQT QKLS SSCAYF*PGTAH+CS LQLPLHSS QLTTRP CRHRTPQLHNYQC
Subject   6374  EV*NLNYAQLPS*LPPCQSKLAHPQHPTQMVNL*SLHQTCHYAHQNQRIEGTYMYFCQTCRSLTL*SEPPLEH*YFDMGQRITRQNQKSHSQTDTHRVCLSSLLQHNQESMA*CTSQKGLECRERRP*KL*NSRLQ**ALLSNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SNNAKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQLPLHSSFQLTTRPTCRHRTPQLHNYQC  7111

Range 4: 6675 to 7109 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
290.7 bits(628) 0.0 129/145(89%) 0/145(0%) Minus/Plus
Query        3  *K*FDKRAHH*RREFHSFYGRRSRHSKSLWEVHQAILSWLRCKREDKHT**VSVCE*LF*F*RAIL*PISKYQCSKGGSLHEVKVLQVW**WMLVPSILWF*CA**QV**SDYRFSI*VGC*GCANLLWQGGS*FGCCA*FRFQT  437
                *K*FDKRAH+*RREFHSF+GRRSRHSK  WEVHQAILSWL CKREDKHT *VSVCE*LF*F*R IL*PISKYQCSKGGSLH+VK LQVW  +M VPSILWF*CA**QV**SDYRF+I*VGC*GCANLLWQGGS* G CA*FRFQT
Subject   6675  *K*FDKRAHY*RREFHSFHGRRSRHSKPFWEVHQAILSWLCCKREDKHTR*VSVCE*LF*F*RVIL*PISKYQCSKGGSLHKVKDLQVWQKYM*VPSILWF*CA**QV**SDYRFTI*VGC*GCANLLWQGGS*LGSCA*FRFQT  7109

Range 5: 6375 to 6641 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
179.8 bits(386) 0.0 82/89(92%) 0/89(0%) Minus/Plus
Query      471  H**LCN*GVLCLQAGRVVN*DDE*RGS*STLQLCAVPG*K*AQDEVLNFWVV*SYRLGLKCLA*CDYYE*LS*SFVYV*VCGCL*RAQI  737
                H**LCN*GVLCLQ GRVVN*+DE*RGS*S LQLCAVPG*K*AQDE+LNFW+V*SYRLGLKCLA  DYYE*LS*SFVYV*VCGCL*RAQI
Subject   6375  H**LCN*GVLCLQVGRVVN*NDE*RGS*SALQLCAVPG*K*AQDEMLNFWIV*SYRLGLKCLALLDYYE*LS*SFVYV*VCGCL*RAQI  6641

Range 6: 6684 to 7109 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
299.4 bits(647) 0.0 132/142(93%) 0/142(0%) Plus/Minus
Query        3  SLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSNLSLCTSKPKDRRN*HPLLPNLQDFDFMKRATLGTLIF*YGSENSTSKSEKSFTDRYSSSMFIFPFTAQPGEYGLMYLPERFGVSGTPAVKAMKLSSSVMSSLIK  428
                SLKSELCAAAK TASLPKQISTPSTSNSNGEPVITSS+LSLCTSKPKDRR  H  LPNLQ FDFMK A+LGTLIF*YGSEN+TSKSEKSFTDRYSSSMFIFPFTAQPGEYGLMYLPERFGVSGTPAVKAMKLSSSVMSSLIK
Subject   6684  SLKSELCAAAKLTASLPKQISTPSTSNSNGEPVITSSDLSLCTSKPKDRRYLHVFLPNLQVFDFMK*ASLGTLIF*YGSENNTSKSEKSFTDRYSSSMFIFPFTAQPGEYGLMYLPERFGVSGTPAVKAMKLSSSVMSSLIK  7109

Range 7: 6375 to 6605 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
156.4 bits(335) 0.0 74/77(96%) 0/77(0%) Plus/Minus
Query      507  VDKALTKLFIIITSCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSM  737
                VDKALTKLFIII  CQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSP+L*A*DTSIA*LSM
Subject   6375  VDKALTKLFIII**CQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSM  6605

Range 8: 6611 to 7054 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
262.2 bits(566) 0.0 131/148(89%) 0/148(0%) Minus/Plus
Query       58  SLWVFIACSDFQLLFIAFLXXXXXXX*ESSSLKTRVS*LLRPAFPTLQISLGGTSSHTLLAAL*KGR*TYLMSICL*MTFLILTCYSLTHIKISVFQGWLSS*SQSLAGLVIMDVSSFYPLVLMCIVTGLMK*LQVLHLSWMLRVC*F  501
                SLWVFIACSDFQLLFIAFLVVVKVV**ESS LKTRVS*L RPAFPTLQ  LGGTSSHTLL  L*KGR*TY MSICL*MTFLILTCYSLTHIKISVFQG L+S*SQ  AGL  + VS+FYPLVLMCIVTGLMK*LQV HLSWMLRVC*F
Subject   6611  SLWVFIACSDFQLLFIAFLVVVKVV**ESSLLKTRVS*LSRPAFPTLQTFLGGTSSHTLLVVL*KGR*TYSMSICL*MTFLILTCYSLTHIKISVFQGRLTS*SQRPAGLAKIHVSTFYPLVLMCIVTGLMK*LQVHHLSWMLRVC*F  7054

Range 9: 6374 to 6568 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
135.8 bits(290) 0.0 58/65(89%) 0/65(0%) Minus/Plus
Query      544  ALIIMQLRCPMPTGWASCQLR**MKRKLKHTTIVCGSWLEISTR*GAQFLGCLKL*IRP*VFGMM  738
                ALIIMQLRCPMPTGWASCQL+**MKRKLK TT VCGSWLEISTR* AQFL CLKL*IRP*VFG++
Subject   6374  ALIIMQLRCPMPTGWASCQLK**MKRKLKRTTTVCGSWLEISTR*DAQFLDCLKL*IRP*VFGII  6568

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OB1

Sequence ID: AB277783.1 Length: 2876 Number of Matches: 8

Range 1: 629 to 1366 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
546.8 bits(1187) 0.0 228/246(93%) 0/246(0%) Minus/Plus
Query        2  CIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHDVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVNDFSDFDVLFSDPYQNISVPRVALFMKSKSCRFGNNGC*FLLSFGFDVHSDRFDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKL  739
                CIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALS+WH VIIMNNLVKALSTFEFVG+YSVLRFPVVVHSVPGSGKSSLIREL+TEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSV+D S FDVLFSDPYQNISVPR A F+KSK+CRFG N C +LLSFGF++HSDR DEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKL
Subject    629  CIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHGVIIMNNLVKALSTFEFVGIYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKL  1366

Range 2: 629 to 1366 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
485.9 bits(1054) 0.0 204/246(83%) 0/246(0%) Plus/Minus
Query        2  KFEI*IMRSSQINCLLAKAN*HTLNIQLKWRTCNHFIKPVTMHIKTKG*KELTSIITKPARL*LHEESHPWNTDILIWVRE*HVKIRKVIHRQILIKYVYLPFYSAARRVWLDVPPREIWSVGNAGRKSYETLVFSDELSYQTTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHIMPNT*GLIYSFKQPRN*APHLVLISNQEPHTIVVCFNFLFIHHLN*QLAQPVGIGHLNCIIINA  739
                KFEI IMRS  INCLLAKAN HTLNIQLKWR CNHFI+PVTM IKTKG K LT I  K A L*L+E S PWNTDILIWVR+*HVK R V +RQILIKYVYLP YS  RRVWL+VPPRE+ SVGNAGRK YETLV SD+ SY T FTTTRNA+NNNWKSEHAINTHKLKRRQSFN*VIHNNH MPNT*GLIYSFKQPRN*APHLV ISN EPHT+VVCFNFLFIHH N*QLAQPVGIG+LNCI+INA
Subject    629  KFEIGIMRSR*INCLLAKANQHTLNIQLKWRACNHFIRPVTMQIKTKGQKVLTCIFAKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYLPLYSTTRRVWLNVPPREVGSVGNAGRKGYETLVLSDKFSY*TAFTTTRNAVNNNWKSEHAINTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQPRN*APHLVFISN*EPHTVVVCFNFLFIHHFN*QLAQPVGIGYLNCIVINA  1366

Range 3: 630 to 1367 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
468.4 bits(1016) 0.0 203/246(83%) 0/246(0%) Plus/Minus
Query        1  EV*NLNYAQQPNQLPPCQSKLAHPQHPTQMENL*SLHQTCHYAHQNQRIEGTNIHYYQTCKTLTS*REPPLEH*YFDMGQRIARQNQKSHSQTDTHQVCLSSLLQRSQESMA*CTSQRDLECRERRP*KL*NSRLQ**ALLSNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*PGTAHNCSVLQLPLHSSSQLTTRPACRHRTPQLHNYQC  738
                EV*N NYAQ  NQLPPCQSK AHPQHPTQM +L*SLHQTCHYA+ NQR EGT +++ Q C++LT * EPPLEH*YFDMGQ+I RQNQK H QTDTHQVCLSS LQ +QESMA*CTSQR  ECRERRP*+L*NSR Q*  LL N FYHYQER EQQLEI*ARYK+PQTQT*TKL*LSYS**SHHAK+LRPNL*LQTTQKLSTSSC YF* GTAH+CSVLQLPLHSS QLTTRPACRHR PQLH+YQC
Subject    630  EV*NRNYAQPLNQLPPCQSKSAHPQHPTQMASL*SLHQTCHYAN*NQRTEGTYMYFRQICRSLTL*SEPPLEH*YFDMGQKITRQNQKCHLQTDTHQVCLSSPLQHNQESMA*CTSQRGWECRERRP*RL*NSRPQ*QVLLLNCFYHYQERCEQQLEI*ARYKYPQTQT*TKL*LSYS**SHHAKYLRPNL*LQTTQKLSTSSCVYF*LGTAHSCSVLQLPLHSSFQLTTRPACRHRIPQLHSYQC  1367

Range 4: 940 to 1365 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
280.6 bits(606) 0.0 125/142(88%) 0/142(0%) Plus/Minus
Query        3  SLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSNLSLCTSKPKDRRN*HPLLPNLQDFDFMKRATLGTLIF*YGSENSTSKSEKSFTDRYSSSMFIFPFTAQPGEYGLMYLPERFGVSGTPAVKAMKLSSSVMSSLIK  428
                SLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSS+LSLC  KPKDRR  H   PNLQ FDFMK A+LGTLIF*YGSEN+TSK E S TDRYSSSMFIFPFTAQPGEYGLMYLPER GVSGTPAVKAMKLSSSV SSLIK
Subject    940  SLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLIF*YGSENNTSKPEMSLTDRYSSSMFIFPFTAQPGEYGLMYLPERLGVSGTPAVKAMKLSSSVTSSLIK  1365

Range 5: 631 to 861 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
160.5 bits(344) 0.0 75/77(97%) 0/77(0%) Plus/Minus
Query      507  VDKALTKLFIIITSCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSM  737
                VDKALTKLFIIIT CQ LKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSM
Subject    631  VDKALTKLFIIITPCQILKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSM  861

Range 6: 631 to 1365 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
418.0 bits(906) 0.0 207/245(84%) 0/245(0%) Minus/Plus
Query        3  H**LCN*GVLCLQAGRVVN*DDE*RGS*STLQLCAVPG*K*AQDEVLNFWVV*SYRLGLKCLA*CDYYE*LS*SFVYV*VCGCL*RAQIXXXXXXXXXXW*K*FDKRAHH*RREFHSFYGRRSRHSKSLWEVHQAILSWLRCKREDKHT**VSVCE*LF*F*RAIL*PISKYQCSKGGSLHEVKVLQVW**WMLVPSILWF*CA**QV**SDYRFSI*VGC*GCANLLWQGGS*FGCCA*FRFQT  737
                H**LCN*G+LCLQAGRVVN*+DE*RGS*STLQLCAVP *K* QDEVLNFWVV*SYRLGLK LA CDYYE*LS*SFVYV*VCG L*RAQISSCCS RSW*W*K F+KR  H* REFHS YGRRSRHS+ LWEVH AILSWL CK EDKHT**VSVC+* F F*R I *PISKYQCSKGGSLH+VK LQ+W  +M VPS+LWF* A**QV**SDYR +I*VGC*GCA+LLWQGGS*F  CA*FRFQT
Subject    631  H**LCN*GILCLQAGRVVN*NDE*RGS*STLQLCAVPS*K*TQDEVLNFWVV*SYRLGLKYLAWCDYYE*LS*SFVYV*VCGYL*RAQISSCCSQRSW*W*KQFNKRTCH*GREFHSLYGRRSRHSQPLWEVH*AILSWLCCKGEDKHT**VSVCK*HFWF*RVIF*PISKYQCSKGGSLHKVKDLQIWRKYM*VPSVLWF*FA**QV**SDYRLAI*VGC*GCADLLWQGGS*FSGCA*FRFQT  1365

Range 7: 867 to 1310 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
239.8 bits(517) 0.0 119/148(80%) 0/148(0%) Minus/Plus
Query       58  SLWVFIACSDFQLLFIAFLXXXXXXX*ESSSLKTRVS*LLRPAFPTLQISLGGTSSHTLLAAL*KGR*TYLMSICL*MTFLILTCYSLTHIKISVFQGWLSS*SQSLAGLVIMDVSSFYPLVLMCIVTGLMK*LQVLHLSWMLRVC*F  501
                SLWVFIACSDFQLLF AFLVVVK V**E+ SL+TRVS* LRPAFPTL  SLGGT SHTLL  L*+GR*TYLMSICL*+TFL+LTCY LTHIKISVFQG L+S*SQ  A L  + VS+F PLVL+CIVTGLMK*LQ  HLSWMLRVC*F
Subject    867  SLWVFIACSDFQLLFTAFLVVVKAV**ENLSLRTRVS*PLRPAFPTLPTSLGGTLSHTLLVVL*RGR*TYLMSICL*VTFLVLTCYFLTHIKISVFQGRLTS*SQRPADLAKIHVSTFCPLVLICIVTGLMK*LQARHLSWMLRVC*F  1310

Range 8: 630 to 827 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
132.6 bits(283) 0.0 59/66(89%) 0/66(0%) Minus/Plus
Query      541  ALIIMQLRCPMPTGWASCQLR**MKRKLKHTTIVCGSWLEISTR*GAQFLGCLKL*IRP*VFGMM*  738
                ALI MQLR PMPTGWASCQL+**MKRKLKHTT VCGS LEI+TR*GAQFLGCLKL*IRP*VFGM+*
Subject    630  ALITMQLRYPMPTGWASCQLK**MKRKLKHTTTVCGS*LEINTR*GAQFLGCLKL*IRP*VFGMV*  827

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 9

Range 1: 6373 to 7110 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
545.0 bits(1183) 0.0 228/246(93%) 0/246(0%) Minus/Plus
Query        2  CIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHDVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVNDFSDFDVLFSDPYQNISVPRVALFMKSKSCRFGNNGC*FLLSFGFDVHSDRFDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKL  739
                CIDNYAIEVSYAYRLGEL+IEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWH VIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIREL+TEDE+FIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSV+D S FDVLFSDPYQNISVPR A F+KSK+CRFG N C +LLSFGF++HSDR DEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKL
Subject   6373  CIDNYAIEVSYAYRLGELAIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELVTEDENFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKL  7110

Range 2: 6373 to 7110 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
490.4 bits(1064) 0.0 207/246(84%) 0/246(0%) Plus/Minus
Query        2  KFEI*IMRSSQINCLLAKAN*HTLNIQLKWRTCNHFIKPVTMHIKTKG*KELTSIITKPARL*LHEESHPWNTDILIWVRE*HVKIRKVIHRQILIKYVYLPFYSAARRVWLDVPPREIWSVGNAGRKSYETLVFSDELSYQTTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHIMPNT*GLIYSFKQPRN*APHLVLISNQEPHTIVVCFNFLFIHHLN*QLAQPVGIGHLNCIIINA  739
                KFEI IMRS  INCLLAKAN*HTLNIQLKWRTCNHFI+PVTM IKTKG K LT I  K A L*L+E S PWNTDILIWVR+*HVK R V +RQILIKYVYLPFYS  RRVWLDVPPRE+  V NAGRK YE LV SD+ SY TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNH MPNT*GLIYSFKQPRN*APHLVLISN EPHT+VVCFNFLFIHH N QLAQPVGIG+LNCI+INA
Subject   6373  KFEIRIMRSR*INCLLAKAN*HTLNIQLKWRTCNHFIRPVTMQIKTKGQKVLTCIFAKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYLPFYSTTRRVWLDVPPREVGCVRNAGRKGYEILVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQPRN*APHLVLISN*EPHTVVVCFNFLFIHHFNCQLAQPVGIGYLNCIVINA  7110

Range 3: 6374 to 7111 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
484.5 bits(1051) 0.0 208/246(85%) 0/246(0%) Plus/Minus
Query        1  EV*NLNYAQQPNQLPPCQSKLAHPQHPTQMENL*SLHQTCHYAHQNQRIEGTNIHYYQTCKTLTS*REPPLEH*YFDMGQRIARQNQKSHSQTDTHQVCLSSLLQRSQESMA*CTSQRDLECRERRP*KL*NSRLQ**ALLSNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*PGTAHNCSVLQLPLHSSSQLTTRPACRHRTPQLHNYQC  738
                EV*N NYAQ  NQLPPCQSKLAHPQHPTQM NL*SLHQTCHYA+ NQR EGT +++ Q C++LT * EPPLEH*YFDMGQ+I RQNQK H QTDTHQVCLSSLLQ +QESMA*CTSQR   C+ERRP*+L*NSR Q*  LL NYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF* GTAH+CSVLQLPLHSS QL TRPACRHR PQLH+YQC
Subject   6374  EV*NQNYAQPLNQLPPCQSKLAHPQHPTQMANL*SLHQTCHYAN*NQRTEGTYMYFRQICRSLTL*SEPPLEH*YFDMGQKITRQNQKCHLQTDTHQVCLSSLLQHNQESMA*CTSQRGWVCQERRP*RL*NSRPQ*QVLLLNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*LGTAHSCSVLQLPLHSSFQLPTRPACRHRIPQLHSYQC  7111

Range 4: 6675 to 7109 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
257.2 bits(555) 0.0 117/145(81%) 0/145(0%) Minus/Plus
Query        3  *K*FDKRAHH*RREFHSFYGRRSRHSKSLWEVHQAILSWLRCKREDKHT**VSVCE*LF*F*RAIL*PISKYQCSKGGSLHEVKVLQVW**WMLVPSILWF*CA**QV**SDYRFSI*VGC*GCANLLWQGGS*FGCCA*FRFQT  437
                *K*F+KR  H* REFHS YGRRS H++ LWEVHQAILSWL CKREDKHT**VSVC+* F F*R I *PISKYQCSKGGSLH+VK LQ+W  +M VPS+LWF* A**QV**SDYRF+I*VGC*GCANLLWQGGS*F  CA*F FQT
Subject   6675  *K*FNKRTCH*GREFHSLYGRRS*HTQPLWEVHQAILSWLCCKREDKHT**VSVCK*HFWF*RVIF*PISKYQCSKGGSLHKVKDLQIWRKYM*VPSVLWF*FA**QV**SDYRFAI*VGC*GCANLLWQGGS*FSGCA*F*FQT  7109

Range 5: 6375 to 6641 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
183.9 bits(395) 0.0 84/89(94%) 0/89(0%) Minus/Plus
Query      471  H**LCN*GVLCLQAGRVVN*DDE*RGS*STLQLCAVPG*K*AQDEVLNFWVV*SYRLGLKCLA*CDYYE*LS*SFVYV*VCGCL*RAQI  737
                H**LCN*G+LCLQAGRV N*+DE*RGS*STLQLCAVP *K*AQDEVLNFWVV*SYRLGLKCLA CDYYE*LS*SFVYV*VCGCL*RAQI
Subject   6375  H**LCN*GILCLQAGRVGN*NDE*RGS*STLQLCAVPS*K*AQDEVLNFWVV*SYRLGLKCLAWCDYYE*LS*SFVYV*VCGCL*RAQI  6641

Range 6: 6684 to 7109 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
278.7 bits(602) 0.0 124/142(87%) 0/142(0%) Plus/Minus
Query        3  SLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSNLSLCTSKPKDRRN*HPLLPNLQDFDFMKRATLGTLIF*YGSENSTSKSEKSFTDRYSSSMFIFPFTAQPGEYGLMYLPERFGVSGTPAVKAMKLSSSVMSSLIK  428
                SLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSS+LSLC  KPKDRR  H   PNLQ FDFMK A+LGTLIF*YGSEN+TSK E S TDRYSSSMFIFPFTAQPGEYGLMYLPER GVSGTPAVKAMK SSSV SSLIK
Subject   6684  SLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLIF*YGSENNTSKPEMSLTDRYSSSMFIFPFTAQPGEYGLMYLPERLGVSGTPAVKAMKFSSSVTSSLIK  7109

Range 7: 6375 to 6605 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
159.6 bits(342) 0.0 75/77(97%) 0/77(0%) Plus/Minus
Query      507  VDKALTKLFIIITSCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSM  737
                VDKALTKLFIIIT CQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISI NSPSL*A*DTSIA*LSM
Subject   6375  VDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIANSPSL*A*DTSIA*LSM  6605

Range 8: 6611 to 7054 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
239.8 bits(517) 0.0 121/148(82%) 0/148(0%) Minus/Plus
Query       58  SLWVFIACSDFQLLFIAFLXXXXXXX*ESSSLKTRVS*LLRPAFPTLQISLGGTSSHTLLAAL*KGR*TYLMSICL*MTFLILTCYSLTHIKISVFQGWLSS*SQSLAGLVIMDVSSFYPLVLMCIVTGLMK*LQVLHLSWMLRVC*F  501
                SLWVFIACSDFQLLFIAFLVVVKVV**E+ SL+TR+S* LRPAF T   SLGGTSSHTLL  L*KGR*TYLMSICL*+TFL+LTCY LTHIKISVFQG L+S*SQ  A L  + VS+F PLVL+CIVTGLMK*LQV HLSWMLRVC*F
Subject   6611  SLWVFIACSDFQLLFIAFLVVVKVV**ENLSLRTRIS*PLRPAFLTHPTSLGGTSSHTLLVVL*KGR*TYLMSICL*VTFLVLTCYFLTHIKISVFQGRLTS*SQRPADLAKIHVSTFCPLVLICIVTGLMK*LQVRHLSWMLRVC*F  7054

Range 9: 6374 to 6571 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.9 bits(275) 0.0 59/66(89%) 0/66(0%) Minus/Plus
Query      541  ALIIMQLRCPMPTGWASCQLR**MKRKLKHTTIVCGSWLEISTR*GAQFLGCLKL*IRP*VFGMM*  738
                ALI MQLR PMPTGWAS QL+**MKRKLKHTT VCGS LEISTR*GAQFLGCLKL*IRP*VFGM+*
Subject   6374  ALITMQLRYPMPTGWASWQLK**MKRKLKHTTTVCGS*LEISTR*GAQFLGCLKL*IRP*VFGMV*  6571

Grapevine Rupestris stem pitting associated virus, complete genome

Sequence ID: AF026278.1 Length: 8725 Number of Matches: 11

Range 1: 6373 to 7110 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
506.5 bits(1099) 0.0 210/246(85%) 0/246(0%) Minus/Plus
Query        2  CIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHDVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVNDFSDFDVLFSDPYQNISVPRVALFMKSKSCRFGNNGC*FLLSFGFDVHSDRFDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKL  739
                CIDNYAIEVSYAYRLGELSIEMM EEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALS+WH + IMNNLVKALSTFEFVGV+SVL+FPVV+HSVPGSGKSSLIRELI+EDE+FIAFTAGVPD+PNL+GRYIKPYSPGCAV GK+NILDEYLSV DFS FDVLFSDPYQNIS+P+ A F+KSK+CRFG N C +L SFGF V SD  D+VI GSPF LDVEGVLICFGKEAVDLA AHNS+FKL
Subject   6373  CIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHYLSIMNNLVKALSTFEFVGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDKVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKL  7110

Range 2: 6684 to 7109 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
216.0 bits(465) 0.0 98/142(69%) 0/142(0%) Plus/Minus
Query        3  SLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSNLSLCTSKPKDRRN*HPLLPNLQDFDFMKRATLGTLIF*YGSENSTSKSEKSFTDRYSSSMFIFPFTAQPGEYGLMYLPERFGVSGTPAVKAMKLSSSVMSSLIK  428
                +L SELCA A+STASLPK ISTPSTS+  G+P +T S  SL T KPK+ R      PNLQ FD MK A+LG L+F YGSENSTSK EKS+TD+YSSSMF FP TA PGE GLMYLP R G+SGTPAVKAMK SSS +SSLIK
Subject   6684  NLNSELCATARSTASLPKHISTPSTSSVKGDPTMTLSKPSLLTLKPKEERYLQVFTPNLQVFDLMKCASLGMLMFWYGSENSTSKPEKSWTDKYSSSMFTFPGTAHPGE*GLMYLPVRLGLSGTPAVKAMKFSSSEISSLIK  7109

Range 3: 6375 to 6605 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
125.2 bits(267) 0.0 61/77(79%) 0/77(0%) Plus/Minus
Query      507  VDKALTKLFIIITSCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSM  737
                VD ALTKLFII+  CQ LKA*SIASN PEIEHLILCLFLT+N TQL* ASTSSS IIS+D+SPS  A*+TSIA*LS+
Subject   6375  VDNALTKLFIILK*CQILKA*SIASNRPEIEHLILCLFLTKNLTQL*WASTSSSVIISMDSSPSRYA*ETSIA*LSI  6605

Range 4: 6376 to 7107 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
256.7 bits(554) 0.0 122/244(50%) 0/244(0%) Plus/Minus
Query        5  FEI*IMRSSQINCLLAKAN*HTLNIQLKWRTCNHFIKPVTMHIKTKG*KELTSIITKPARL*LHEESHPWNTDILIWVRE*HVKIRKVIHRQILIKYVYLPFYSAARRVWLDVPPREIWSVGNAGRKSYETLVFSDELSYQTTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHIMPNT*GLIYSFKQPRN*APHLVLISNQEPHTIVVCFNFLFIHHLN*QLAQPVGIGHLNCIIIN  736
                FE  ++R+ +I+CLLAKA *H  NIQ K R  N F++ VT ++KT+G K   SI  KP   *L E     N D+L+WVRE H+K  K++  Q+LIKYV+ P +    R+ L+VP  EI +V N   +SYE L+  + L Y TTFTTTR+ MN+ WK +H  NT+KLK  Q FN*+IHN  IMPNT*GLI  FK   N*A HL+L+ +QE +TI++  +F   HH N  L+QPV IG L  II+N
Subject   6376  FEFRVVRNGEIHCLLAKAY*HPFNIQCKRRPHNDFVQTVTANLKTEGGKIFASIHAKPTSF*LDEMCLFRNADVLVWVREQHIKT*KILDGQVLIKYVHFPRHCTPWRIRLNVPSCEIRAVWNTCCESYEILILGN*LPY*TTFTTTRHTMNDYWKFKHTENTYKLKC*QCFN*IIHNTQIMPNT*GLINRFK*A*N*ASHLMLVPDQESNTIIMGLHFFLGHHFNG*LSQPVRIGDLYRIIVN  7107

Range 5: 6377 to 6940 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
154.1 bits(330) 0.0 97/188(52%) 0/188(0%) Plus/Minus
Query      172  QTCKTLTS*REPPLEH*YFDMGQRIARQNQKSHSQTDTHQVCLSSLLQRSQESMA*CTSQRDLECRERRP*KL*NSRLQ**ALLSNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*PGTAHNCSVLQLPLHSSSQLTTRPACRHRTPQLHNYQ  735
                QT K LT *  P  E * F MG R A QN K+  +T THQVC  S    + E+ A*CT   D  C E   *KL*NS  +  A L NYFYHYQ  YE  LEI*A  KH QTQ  T L*L+YS* S++AK+LRPN  LQ   KLS SS A  *P   HN +   L   SS Q    PA  HR P  HN Q
Subject   6377  QTYKFLT**NVPL*EC*CFGMGPRTAHQNLKNLGRTSTHQVCSLSPALHTLENKA*CTFL*D*GCLEHLL*KL*NSHPRKLAPLLNYFYHYQAHYE*LLEI*AH*KHLQTQMLTML*LNYS*YSNNAKYLRPNQSLQIGLKLSISSYACS*PRI*HNYNGPPLLPRSSFQWIALPAGTHRRPLSHNCQ  6940

Range 6: 7031 to 7090 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
32.2 bits(64) 0.0 13/20(65%) 0/20(0%) Plus/Minus
Query       22  AQQPNQLPPCQSKLAHPQHP  81
                AQ+ + LPPCQS LA  QHP
Subject   7031  AQRRDPLPPCQSILAPLQHP  7090

Range 7: 6707 to 7054 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.7 bits(161) 0.0 49/116(42%) 0/116(0%) Minus/Plus
Query       58  KTRVS*LLRPAFPTLQISLGGTSSHTLLAAL*KGR*TYLMSICL*MTFLILTCYSLTHIKISVFQGWLSS*SQSLAGLVIMDVSSFYPLVLMCIVTGLMK*LQVLHLSWMLRVC*F  405
                + R+S*L +  F T  IS  GT S  L     +G+*TYLMS C    F +L C S TH K S F     S SQ L GL  +  + F P VL   VT   K L    L WML+ C*+
Subject   6707  RMRIS*LSQQVFQTALISQEGTLSLILQGVQCRGK*TYLMSTCPSKIFQVLMCCSRTHTKTSAFLKRHISSSQKLVGLA*ILANIFPPSVLRLAVTVWTKSLWGRLLHWMLKGC*Y  7054

Range 8: 6384 to 6623 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.3 bits(158) 0.0 41/80(51%) 0/80(0%) Minus/Plus
Query      489  LCN*GVLCLQAGRVVN*DDE*RGS*STLQLCAVPG*K*AQDEVLNFWVV*SYRLGLKCLA*CDYYE*LS*SFVYV*VCGC  728
                LC+ G+LC+ AGR ++*+D+   S   L LC + G + A DE+LNF  +*S  LGLK LA  +YYE* S*S V +*VC C
Subject   6384  LCDRGLLCVPAGRAIH*NDDRGRSGGPL*LC*ILGQEQA*DEMLNFRPI*SD*LGLKYLALFEYYE*FS*SIVNI*VCRC  6623

Range 9: 7032 to 7091 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.9 bits(61) 0.0 13/20(65%) 0/20(0%) Minus/Plus
Query       21  GC*GCANLLWQGGS*FGCCA  80
                GC*  AN+LWQGGS    CA
Subject   7032  GC*RGANMLWQGGSGSRRCA  7091

Range 10: 6675 to 6980 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.3 bits(147) 0.0 46/102(45%) 0/102(0%) Minus/Plus
Query      132  *K*FDKRAHH*RREFHSFYGRRSRHSKSLWEVHQAILSWLRCKREDKHT**VSVCE*LF*F*RAIL*PISKYQCSKGGSLHEVKVLQVW**WMLVPSILWF*  437
                *K*F+K A+    EFHSF+ R SR   S  +VH A+ S +    E +HT**V V    F F* A+L PI K+Q S  G+ H+VK L VW  ++ +  +L F*
Subject   6675  *K*FNKGANFRG*EFHSFHSRCSRQP*SHRKVH*ALFSRVCSAGESEHT**VLVRPRFFRF*CAVLGPIPKHQHS*RGTFHQVKNL*VWREYLQISFLLRF*  6980

Range 11: 6377 to 6571 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.5 bits(130) 0.0 34/65(52%) 0/65(0%) Minus/Plus
Query      541  LIIMQLRCPMPTGWASCQLR**MKRKLKHTTIVCGSWLEISTR*GAQFLGCLKL*IRP*VFGMM*  735
                L IM+ R PM TGW S  L+** ++K +   IV  SW   S R* AQF   LK  IRP*VFG++*
Subject   6377  LTIMR*RSPMRTGWESYPLK**PRKKWRPIIIVLDSWSGTSIR*DAQFQAYLKRLIRP*VFGII*  6571

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: Hiz3

Sequence ID: AB277785.1 Length: 2876 Number of Matches: 11

Range 1: 629 to 1366 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
504.2 bits(1094) 0.0 209/246(85%) 0/246(0%) Minus/Plus
Query        2  CIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHDVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVNDFSDFDVLFSDPYQNISVPRVALFMKSKSCRFGNNGC*FLLSFGFDVHSDRFDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKL  739
                CIDNYAIEVSYAYRLGELSIEMM EEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALS+WH + IMNNLVKALS FEFVGV+SVL+FPVV+HSVPGSGKSSLIRELI+EDE+FIAFTAGVPD+PNL+GRYIKPYSPGCAV GK+NILDEYLSV DFS FDVLFSDPYQNIS+P+ A F+KSK+CRFG N C +L SFGF V SD  D+VI GSPF LDVEGVLICFGKEAVDLA AHNS+FKL
Subject    629  CIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHYLSIMNNLVKALSAFEFVGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDKVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKL  1366

Range 2: 940 to 1365 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
211.4 bits(455) 0.0 96/142(68%) 0/142(0%) Plus/Minus
Query        3  SLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSNLSLCTSKPKDRRN*HPLLPNLQDFDFMKRATLGTLIF*YGSENSTSKSEKSFTDRYSSSMFIFPFTAQPGEYGLMYLPERFGVSGTPAVKAMKLSSSVMSSLIK  428
                +L SELCA A+STASLPK ISTPSTS+  G+P +T S  SL T KPK+ R      PNLQ FD MK A+LG L+F YGSENSTSK EKS+TD+YSSS+F  P TA PGE GLMYLP R G+SGTPAVKAMK SSS +SSLIK
Subject    940  NLNSELCATARSTASLPKHISTPSTSSVKGDPTMTLSKPSLLTLKPKEERYLQVFTPNLQVFDLMKCASLGMLMFWYGSENSTSKPEKSWTDKYSSSIFTLPGTAHPGE*GLMYLPVRLGLSGTPAVKAMKFSSSEISSLIK  1365

Range 3: 631 to 858 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.4 bits(263) 0.0 60/76(79%) 0/76(0%) Plus/Minus
Query      510  DKALTKLFIIITSCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSM  737
                D ALTKLFII+  CQ LKA*SIASN PEIEHLILCLFLT+N TQL* ASTSSS IIS+D+SPS  A*+TSIA*LS+
Subject    631  DNALTKLFIILK*CQILKA*SIASNRPEIEHLILCLFLTKNLTQL*WASTSSSVIISMDSSPSRYA*ETSIA*LSI  858

Range 4: 632 to 1363 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
256.7 bits(554) 0.0 122/244(50%) 0/244(0%) Plus/Minus
Query        5  FEI*IMRSSQINCLLAKAN*HTLNIQLKWRTCNHFIKPVTMHIKTKG*KELTSIITKPARL*LHEESHPWNTDILIWVRE*HVKIRKVIHRQILIKYVYLPFYSAARRVWLDVPPREIWSVGNAGRKSYETLVFSDELSYQTTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHIMPNT*GLIYSFKQPRN*APHLVLISNQEPHTIVVCFNFLFIHHLN*QLAQPVGIGHLNCIIIN  736
                FE  ++R+S+I+CLL KA *H  NI  K R  N FI+ VT ++KT+G K   SI  KPA  *L E     N D+L+WVRE*H+K  K++  Q+LIKY++  ++    R+ L+VP  EI +V N   +SYE L+  ++L Y  TFTTTR+ MN+ WK +H  NT+KLK  Q FN*+IHN  IMPNT*GLI  FK   N*A HL+L+ +QE +TI++  +FL  HH N  L+QPV IG L  II+N
Subject    632  FEFRVVRNSEIHCLLTKAY*HPFNI*CKRRPHNDFIQTVTANLKTEGGKIFASIHAKPASF*LDEMCLFRNADVLVWVRE*HIKT*KILDGQVLIKYIHFTWHCTPWRIRLNVPSCEIRAVWNTCCESYEILILGNQLPY*ATFTTTRHTMNDYWKFKHTENTYKLKC*QCFN*IIHNTQIMPNT*GLINRFK*A*N*ASHLMLVPDQESNTIIMGLHFLLGHHFNG*LSQPVCIGDLYRIIVN  1363

Range 5: 633 to 1196 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
159.1 bits(341) 0.0 98/188(52%) 0/188(0%) Plus/Minus
Query      172  QTCKTLTS*REPPLEH*YFDMGQRIARQNQKSHSQTDTHQVCLSSLLQRSQESMA*CTSQRDLECRERRP*KL*NSRLQ**ALLSNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*PGTAHNCSVLQLPLHSSSQLTTRPACRHRTPQLHNYQ  735
                QTCK LT *  P  E * F MG RIA QN K+  +T THQV    L   + E+ A*CT   D  C E   *KL*NS  +  A L +YFYHYQ  YE  LEI*A  KH QTQ  T L*L+YS* S++AK+LRPN  LQ   KLS SS A  *P   HN +   LP  SS Q    PA  HR P  HN Q
Subject    633  QTCKFLT**NVPL*EC*CFGMGPRIAHQNLKNLGRTSTHQVYSLYLALHTLENKA*CTFL*D*GCLEHLL*KL*NSHPRKSAPLLSYFYHYQAHYE*LLEI*AH*KHLQTQMLTML*LNYS*YSNNAKYLRPNQSLQIGLKLSISSYACS*PRI*HNYNGPPLPPRSSFQWIALPAGMHRRPLSHNCQ  1196

Range 6: 1290 to 1346 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.8 bits(50) 0.0 12/19(63%) 0/19(0%) Plus/Minus
Query       22  AQQPNQLPPCQSKLAHPQH  78
                AQQ + LPP QS LA  QH
Subject   1290  AQQRDPLPPYQSILAPLQH  1346

Range 7: 640 to 879 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.4 bits(167) 0.0 42/80(52%) 0/80(0%) Minus/Plus
Query      489  LCN*GVLCLQAGRVVN*DDE*RGS*STLQLCAVPG*K*AQDEVLNFWVV*SYRLGLKCLA*CDYYE*LS*SFVYV*VCGC  728
                LC+ G+LC+ AGR ++*+D+  GS   L LC + G + A DE+LNF  +*S  LGLK LA  +YYE* S*S V +*VC C
Subject    640  LCDRGLLCIPAGRAIH*NDDRGGSGGPL*LC*ILGQEQA*DEMLNFRPI*SD*LGLKYLALFEYYE*FS*SIVSI*VCRC  879

Range 8: 963 to 1310 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
69.3 bits(145) 0.0 48/116(41%) 0/116(0%) Minus/Plus
Query       58  KTRVS*LLRPAFPTLQISLGGTSSHTLLAAL*KGR*TYLMSICL*MTFLILTCYSLTHIKISVFQGWLSS*SQSLAGLVIMDVSSFYPLVLMCIVTGLMK*LQVLHLSWMLRVC*F  405
                + R+S*L +  F T  IS  GT S  L     + +* YLMS C    F +L CYS TH K S F     S SQ LAGL  +  + F P VL   VT  +K L    L  ML+ C*+
Subject    963  RMRIS*LSQQVFQTALISQEGTLSLILQGVQCQVK*IYLMSTCPSKIFQVLMCYSRTHTKTSAFLKRHISSSQKLAGLA*ILANIFPPSVLRLAVTVWIKSLWGRLLH*MLKGC*Y  1310

Range 9: 1291 to 1347 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.5 bits(58) 0.0 12/19(63%) 0/19(0%) Minus/Plus
Query       21  C*GCANLLWQGGS*FGCCA  77
                C*  AN+LW GGS   CCA
Subject   1291  C*RGANMLW*GGSGSRCCA  1347

Range 10: 931 to 1236 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.5 bits(141) 0.0 46/102(45%) 0/102(0%) Minus/Plus
Query      132  *K*FDKRAHH*RREFHSFYGRRSRHSKSLWEVHQAILSWLRCKREDKHT**VSVCE*LF*F*RAIL*PISKYQCSKGGSLHEVKVLQVW**WMLVPSILWF*  437
                *K* +K A     EFHSF+ R SR   S  +VH A+ S +   R  ++T**V V    F F* AIL PI K+Q S  G+ H+VK LQVW  ++ +  +L F*
Subject    931  *K*LNKGADFRG*EFHSFHSRCSRQP*SHRKVH*ALFSRVCSAR*SEYT**VLVRPRFFRF*CAILGPIPKHQHS*RGTFHQVKNLQVWREYLQISFLLRF*  1236

Range 11: 633 to 827 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.8 bits(133) 0.0 35/65(54%) 0/65(0%) Minus/Plus
Query      541  LIIMQLRCPMPTGWASCQLR**MKRKLKHTTIVCGSWLEISTR*GAQFLGCLKL*IRP*VFGMM*  735
                L IM+ R PM TGW S  L+** +RK +   IV  SW   S R* AQF   LK  IRP*VFG++*
Subject    633  LTIMR*RSPMHTGWESYPLK**PRRKWRPIIIVLDSWSGTSIR*DAQFQAYLKRLIRP*VFGII*  827

Nucleotide Sequence (373 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 33 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
38
76
114
152
190
228
266
304
342
373

Descriptions

Alignments

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 6

Range 1: 2533 to 2892 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
298.9 bits(646) 0.0 118/120(98%) 0/120(0%) Plus/Plus
Query        8  VTKTRNPVEGNHCSLTIEPSEFFEMPRGMQSNFFHGVSNCLSGRVSLTFRRQKLEDDDQIFVSPQVPIEQNHEKLDRNMWQMGLHGIKKSISINGTSFTSDLCSCYSCHNFHKFKDLINN  367
                V+KTRNPVEGNHCSLTIEPSEFFEMPRGMQSNFFHGVSNCLSGRVSLTFRRQKLEDDDQIFVSPQVPIEQNHEKLDRNMWQMGLHGIKKSISINGTSFTSDLCSC+SCHNFHKFKDLINN
Subject   2533  VSKTRNPVEGNHCSLTIEPSEFFEMPRGMQSNFFHGVSNCLSGRVSLTFRRQKLEDDDQIFVSPQVPIEQNHEKLDRNMWQMGLHGIKKSISINGTSFTSDLCSCFSCHNFHKFKDLINN  2892

Range 2: 2533 to 2892 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
260.4 bits(562) 0.0 111/120(92%) 0/120(0%) Minus/Minus
Query        8  IVYQILEFVKVMTRIARTKV*CKACAID*NGFLDSMKAHLPHVSIKLLMILLNGHLRANKNLVIIFQFLASECQRHSPTQTIGNAMEKVALHTSRHLKKLARFNCQAAVVSFNWISSLSN  367
                IVYQILEFVKVMTR ARTKV*CKACAID*NGFLD M+ HLPHVSIKLLMILLN HLRANKNLV+IFQFLASECQR+SPTQTIGNAMEKVALHTSRHLK+LARFNCQAAVVSFNWISSL+N
Subject   2533  IVYQILEFVKVMTRKARTKV*CKACAID*NGFLDPMETHLPHVSIKLLMILLNWHLRANKNLVVIFQFLASECQRYSPTQTIGNAMEKVALHTSRHLKELARFNCQAAVVSFNWISSLTN  2892

Range 3: 2531 to 2893 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
260.0 bits(561) 0.0 111/121(92%) 0/121(0%) Minus/Minus
Query        6  DCLSDP*ICESYDKNSKNKGLM*SLCH*LKWIS*FHEGPSATCFDQASHDFAQWALEG*QKFGHHLPVFGVGMSKTLSHSDNWKRHGKSCSAYLEASQKTR*VQLSGCSGFLQLDF*S**L  368
                DCLSDP*ICESYDK SKNKGLM*SLCH*LKWIS* H  PSATCFDQASHDFAQ ALEG*QKFG HLPVFGVGMSK LSHS+NWKRHGKSCSAYLEASQ+TR*VQLSGCSGFLQLDF*S *L
Subject   2531  DCLSDP*ICESYDKKSKNKGLM*SLCH*LKWIS*SHGDPSATCFDQASHDFAQLALEG*QKFGRHLPVFGVGMSKILSHSNNWKRHGKSCSAYLEASQRTR*VQLSGCSGFLQLDF*SY*L  2893

Range 4: 2534 to 2893 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
246.2 bits(531) 0.0 111/120(92%) 0/120(0%) Plus/Plus
Query        9  LLRLEIQLKETTAA*QLNLASFLRCLEVCRATFSMAFPIV*VGECL*HSDAKNWKMMTKFLLALKCPLSKIMRSLIETCGRWAFMESRNPFQSMAQALHQTFVLAILVITFTNSRI**TI  368
                L+RLEIQLKETTAA*QLNLAS LRCLEVCRATFSMAFPIV*VGE L*HSDAKNWKM TKFLLALKC LSKIMRSLIETCGRW  M SRNPFQSMAQALHQTFVLA LVITFTNSRI**TI
Subject   2534  LVRLEIQLKETTAA*QLNLASSLRCLEVCRATFSMAFPIV*VGEYL*HSDAKNWKMTTKFLLALKCQLSKIMRSLIETCGRWVSMGSRNPFQSMAQALHQTFVLAFLVITFTNSRI**TI  2893

Range 5: 2532 to 2897 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
242.1 bits(522) 0.0 116/122(95%) 0/122(0%) Minus/Minus
Query        7  LGLFIRSLNL*KL*QE*QEQRSDVKLVPLIEMDFLIP*RPICHMXXXXXXXXXSMGT*GLTKIWSSSSSFWRRNVKDTLPLRQLETPWKKLLCIPRGISKNSLGSIVRLQWFPSTGFLVLVT  372
                L LFIRSLNL*KL*QE QEQRSDVKLVPLIEMDFLIP RPICHMFRSSFS*FCS+GT*GLTKIWSSSSSFWRRNVKDTLPL+QLETPWKKLLCIPRGISKNSLGSIVRLQWFPSTGFLVL+T
Subject   2532  LRLFIRSLNL*KL*QEKQEQRSDVKLVPLIEMDFLIPWRPICHMFRSSFS*FCSIGT*GLTKIWSSSSSFWRRNVKDTLPLKQLETPWKKLLCIPRGISKNSLGSIVRLQWFPSTGFLVLLT  2897

Range 6: 2538 to 2897 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
229.3 bits(494) 0.0 111/120(92%) 0/120(0%) Plus/Plus
Query       13  *D*KSS*RKPLQPDN*T*RVF*DASRYAEQLFPWRFQLSEWESVFDIPTPKTGR**PNFC*PSSAH*AKS*EA*SKHVADGPSWNQEIHFNQWHKLYIRPXXXXXXXXXXQIQGSDKQSK  372
                *D*KSS*RKPLQPDN*T*RV *DASRYAEQLFPWRFQL EWES+FDIPTPKTGR* PNFC*PSSA+*AKS*EA*SKHVADG  W+QEIHFNQWHKLYIRPLFLLFLS*LSQIQGSDKQS+
Subject   2538  *D*KSS*RKPLQPDN*T*RVL*DASRYAEQLFPWRFQLFEWESIFDIPTPKTGR*RPNFC*PSSAN*AKS*EA*SKHVADGSPWDQEIHFNQWHKLYIRPLFLLFLS*LSQIQGSDKQSQ  2897

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 6

Range 1: 2533 to 2892 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
292.0 bits(631) 0.0 115/120(96%) 0/120(0%) Plus/Plus
Query        8  VTKTRNPVEGNHCSLTIEPSEFFEMPRGMQSNFFHGVSNCLSGRVSLTFRRQKLEDDDQIFVSPQVPIEQNHEKLDRNMWQMGLHGIKKSISINGTSFTSDLCSCYSCHNFHKFKDLINN  367
                V+KTRN VEGNHCSLTIEP EFFEMPRGMQSNFFHGVSNCLSGRVSLTFRRQKLEDDDQIF+SPQVPIEQNHEKLDRNMWQMGLHGIKKSISINGTSFTSDLCSC+SCHNFHKFKDLINN
Subject   2533  VSKTRNLVEGNHCSLTIEPGEFFEMPRGMQSNFFHGVSNCLSGRVSLTFRRQKLEDDDQIFISPQVPIEQNHEKLDRNMWQMGLHGIKKSISINGTSFTSDLCSCFSCHNFHKFKDLINN  2892

Range 2: 2531 to 2893 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
239.3 bits(516) 0.0 102/121(84%) 0/121(0%) Minus/Minus
Query        6  DCLSDP*ICESYDKNSKNKGLM*SLCH*LKWIS*FHEGPSATCFDQASHDFAQWALEG*QKFGHHLPVFGVGMSKTLSHSDNWKRHGKSCSAYLEASQKTR*VQLSGCSGFLQLDF*S**L  368
                DCLSDP* CESYDK SKNKGLM*SLCH*LKWIS* H GP ATC DQASHDFAQWAL G* KFG HL +FGVGMSKTLSHS NWK HGK+CSAY EASQ+TR VQLSGC+GFLQLDF*S *L
Subject   2531  DCLSDP*TCESYDKKSKNKGLM*SLCH*LKWIS*SHGGPFATCCDQASHDFAQWALGG**KFGRHLLIFGVGMSKTLSHSGNWKHHGKNCSAYPEASQRTRQVQLSGCNGFLQLDF*SY*L  2893

Range 3: 2533 to 2892 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
236.1 bits(509) 0.0 101/120(84%) 0/120(0%) Minus/Minus
Query        8  IVYQILEFVKVMTRIARTKV*CKACAID*NGFLDSMKAHLPHVSIKLLMILLNGHLRANKNLVIIFQFLASECQRHSPTQTIGNAMEKVALHTSRHLKKLARFNCQAAVVSFNWISSLSN  367
                IVYQILE VKVMTR ARTKV*C+ACAI+*NGFLD M+AHLPHV+IKLLMILLNGHL AN+NLV+IF FLASECQRHSPTQ IGN MEK+ALHT RHLK+LARFNCQAA+VSFN ISSL+N
Subject   2533  IVYQILELVKVMTRKARTKV*CEACAIN*NGFLDPMEAHLPHVAIKLLMILLNGHLGANENLVVIF*FLASECQRHSPTQAIGNTMEKIALHTPRHLKELARFNCQAAMVSFN*ISSLTN  2892

Range 4: 2532 to 2897 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
232.0 bits(500) 0.0 112/122(92%) 0/122(0%) Minus/Minus
Query        7  LGLFIRSLNL*KL*QE*QEQRSDVKLVPLIEMDFLIP*RPICHMXXXXXXXXXSMGT*GLTKIWSSSSSFWRRNVKDTLPLRQLETPWKKLLCIPRGISKNSLGSIVRLQWFPSTGFLVLVT  372
                L LFIRSLNL*KL*QE QEQRSDVKLVPLIEMDFLIP RPICHM RSSFS*FCSMGT GL KIWSSSS+FWRRNVKDTLPLRQLETPWKKLLCIPRGISKNS GSIVRLQWFPST FLVL+T
Subject   2532  LRLFIRSLNL*KL*QEKQEQRSDVKLVPLIEMDFLIPWRPICHMLRSSFS*FCSMGTWGLMKIWSSSSNFWRRNVKDTLPLRQLETPWKKLLCIPRGISKNSPGSIVRLQWFPSTRFLVLLT  2897

Range 5: 2531 to 2893 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
216.4 bits(466) 0.0 100/121(83%) 0/121(0%) Plus/Plus
Query        6  ELLRLEIQLKETTAA*QLNLASFLRCLEVCRATFSMAFPIV*VGECL*HSDAKNWKMMTKFLLALKCPLSKIMRSLIETCGRWAFMESRNPFQSMAQALHQTFVLAILVITFTNSRI**TI  368
                +L+RLEI LKET AA*QLNLAS LRCL VCRA FSM FPI *VGECL*HSDAKN KM TKF LA KCPLSKIMRSLI TCG+WA M SRNPFQ MAQA HQTFVLA LVITFT+SRI**TI
Subject   2531  QLVRLEI*LKETIAA*QLNLASSLRCLGVCRAIFSMVFPIA*VGECL*HSDAKN*KMTTKFSLAPKCPLSKIMRSLIATCGKWASMGSRNPFQLMAQASHQTFVLAFLVITFTSSRI**TI  2893

Range 6: 2538 to 2897 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
200.8 bits(432) 0.0 101/120(84%) 0/120(0%) Plus/Plus
Query       13  *D*KSS*RKPLQPDN*T*RVF*DASRYAEQLFPWRFQLSEWESVFDIPTPKTGR**PNFC*PSSAH*AKS*EA*SKHVADGPSWNQEIHFNQWHKLYIRPXXXXXXXXXXQIQGSDKQSK  372
                *D*KSS*RKPLQPDN*T RV *DAS YAEQ FPW FQL EWESVFDIPTPK  R* PNF *P SAH*AKS*EA*S+HVA+GP W+QEIHFN WHKL+IRPLFLLFLS*LSQ+QGSDKQS+
Subject   2538  *D*KSS*RKPLQPDN*TWRVL*DASGYAEQFFPWCFQLPEWESVFDIPTPKIRR*RPNFH*PPSAH*AKS*EA*SQHVANGPPWDQEIHFN*WHKLHIRPLFLLFLS*LSQVQGSDKQSQ  2897

Grapevine rupestris stem pitting associated virus complete genome, isolate PG, genomic RNA

Sequence ID: HE591388.1 Length: 8725 Number of Matches: 8

Range 1: 2533 to 2892 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
267.3 bits(577) 0.0 103/120(86%) 0/120(0%) Plus/Plus
Query        8  VTKTRNPVEGNHCSLTIEPSEFFEMPRGMQSNFFHGVSNCLSGRVSLTFRRQKLEDDDQIFVSPQVPIEQNHEKLDRNMWQMGLHGIKKSISINGTSFTSDLCSCYSCHNFHKFKDLINN  367
                ++K+RN VEGNHCSLTI P+EFFEMPRGMQ N+FHGVSNC  GRVSLTFRRQKLEDDD IF++PQVPIE NHEKLDR+MWQMGLHGIKKSIS+NGTSFTSDLCSC+SCHNFHKFKDLINN
Subject   2533  ISKSRNLVEGNHCSLTIGPNEFFEMPRGMQCNYFHGVSNCTPGRVSLTFRRQKLEDDDLIFINPQVPIELNHEKLDRSMWQMGLHGIKKSISMNGTSFTSDLCSCFSCHNFHKFKDLINN  2892

Range 2: 2547 to 2897 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
155.0 bits(332) 0.0 83/117(71%) 0/117(0%) Minus/Minus
Query       22  LGLFIRSLNL*KL*QE*QEQRSDVKLVPLIEMDFLIP*RPICHMXXXXXXXXXSMGT*GLTKIWSSSSSFWRRNVKDTLPLRQLETPWKKLLCIPRGISKNSLGSIVRLQWFPSTGF  372
                L L +RSLNL*KL QE QE RS+VKLVP IE+DFLIP*RPICH+ RSSFS*  SMGT G  KI SSSS+F R  V+DT P  QLETPWK L C+P GISKNS G IVRLQ  PST F
Subject   2547  LKLLMRSLNL*KLWQEKQEHRSEVKLVPFIEIDFLIP*RPICHILRSSFS*LSSMGTCGFMKIKSSSSNF*RLKVRDTRPGVQLETPWK*LHCMPLGISKNSFGPIVRLQ*LPSTKF  2897

Range 3: 2530 to 2892 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
134.4 bits(287) 0.0 64/121(53%) 0/121(0%) Minus/Minus
Query        5  IVYQILEFVKVMTRIARTKV*CKACAID*NGFLDSMKAHLPHVSIKLLMILLNGHLRANKNLVIIFQFLASECQRHSPTQTIGNAMEKVALHTSRHLKKLARFNCQAAVVSFNWISSLSNS  367
                +V +ILEF+KV+ R AR  V* +  AI  N FL+SMK HLPH S+KL MI LNGHL   ++ +IIFQ L  +   + P +TIGN ME V LH  RH +KL   NCQAA+++ N IS L+NS
Subject   2530  VVDEILEFMKVVAREARA*V*GETRAIHRNRFLNSMKTHLPHTSVKLFMIELNGHLWIYEDQIIIFQLLTPKG*GYPPWRTIGNPMEVVTLHAPRHFEKLIWPNCQAAMITLNQISRLTNS  2892

Range 4: 2726 to 2881 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.8 bits(159) 0.0 32/52(62%) 0/52(0%) Plus/Plus
Query      201  KCPLSKIMRSLIETCGRWAFMESRNPFQSMAQALHQTFVLAILVITFTNSRI  356
                +CPLS IM+SL E CGRW FME RN F  MA+   QT+ LA L  TF NSRI
Subject   2726  RCPLSSIMKSLTEVCGRWVFMELRNLFL*MARVSPQTYALASLATTFINSRI  2881

Range 5: 2534 to 2704 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.3 bits(110) 0.0 28/57(49%) 0/57(0%) Plus/Plus
Query        9  LLRLEIQLKETTAA*QLNLASFLRCLEVCRATFSMAFPIV*VGECL*HSDAKNWKMM  179
                L+  EI L+   AA*QL   SF +CL  C  T SM FPIV  G   *    K+WKMM
Subject   2534  LVSREIWLRVIIAA*QLGQMSFSKCLGACNVTTSMGFPIVRQGGYP*PLGVKSWKMM  2704

Range 6: 2687 to 2890 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.0 bits(164) 0.0 40/68(59%) 0/68(0%) Minus/Minus
Query      162  CLSDP*ICESYDKNSKNKGLM*SLCH*LKWIS*FHEGPSATCFDQASHDFAQWALEG*QKFGHHLPVF  365
                C  DP*I ES  K SK+ GL *+ CH  K IS*FHE PSAT F QA HD AQWA     +  HHLP F
Subject   2687  C**DP*IYESCGKRSKSIGLR*NSCHS*K*IS*FHEDPSATYFGQAFHD*AQWAPVDL*RSNHHLPTF  2890

Range 7: 2546 to 2650 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.3 bits(75) 0.0 17/35(49%) 0/35(0%) Minus/Minus
Query       21  NWKRHGKSCSAYLEASQKTR*VQLSGCSGFLQLDF  125
                NWK HG S  A   A +KT   QLSGC+ + Q +F
Subject   2546  NWKPHGSSYIACP*AFRKTHLAQLSGCNDYPQPNF  2650

Range 8: 2568 to 2891 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
89.0 bits(188) 0.0 53/108(49%) 0/108(0%) Plus/Plus
Query       43  LQPDN*T*RVF*DASRYAEQLFPWRFQLSEWESVFDIPTPKTGR**PNFC*PSSAH*AKS*EA*SKHVADGPSWNQEIHFNQWHKLYIRPXXXXXXXXXXQIQGSDKQ  366
                LQPDN    VF +A  +A  L PW FQL     + ++   K GR** +    + AH*A+S*+A* K+VADG SWN EI+F +WH+ ++RP+ LL L  LS IQGS +Q
Subject   2568  LQPDNWAK*VFRNA*GHAM*LLPWGFQLYARAGIPNL*ASKVGR**FDLHKSTGAH*AQS*KA*PKYVADGSSWN*EIYFYEWHEFHLRPMLLLLLPQLS*IQGSHQQ  2891

Grapevine rupestris stem pitting associated virus isolate GRSPaV GG, complete genome

Sequence ID: JQ922417.1 Length: 8758 Number of Matches: 7

Range 1: 2533 to 2892 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
267.3 bits(577) 0.0 103/120(86%) 0/120(0%) Plus/Plus
Query        8  VTKTRNPVEGNHCSLTIEPSEFFEMPRGMQSNFFHGVSNCLSGRVSLTFRRQKLEDDDQIFVSPQVPIEQNHEKLDRNMWQMGLHGIKKSISINGTSFTSDLCSCYSCHNFHKFKDLINN  367
                ++K+RN VEGNHCSLTI P+EFFEMPRGMQ N+FHGVSNC  GRVSLTFRRQKLEDDD IF++PQVPIE NHEKLDR+MWQMGLHGIKKSIS+NGTSFTSDLCSC+SCHNFHKFKDLINN
Subject   2533  ISKSRNLVEGNHCSLTIGPNEFFEMPRGMQCNYFHGVSNCTPGRVSLTFRRQKLEDDDLIFINPQVPIELNHEKLDRSMWQMGLHGIKKSISMNGTSFTSDLCSCFSCHNFHKFKDLINN  2892

Range 2: 2547 to 2897 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
161.9 bits(347) 0.0 84/117(72%) 0/117(0%) Minus/Minus
Query       22  LGLFIRSLNL*KL*QE*QEQRSDVKLVPLIEMDFLIP*RPICHMXXXXXXXXXSMGT*GLTKIWSSSSSFWRRNVKDTLPLRQLETPWKKLLCIPRGISKNSLGSIVRLQWFPSTGF  372
                L L +RSLNL*KL QE QE RS+VKLVP IE+DFLIP*RPICH+ RSSFS*  SMGT G  KI SSSS+FWR  V+DT P  QLETPWK L C+P GISKNS G IVRLQ  PST F
Subject   2547  LKLLMRSLNL*KLWQEKQEHRSEVKLVPFIEIDFLIP*RPICHILRSSFS*LSSMGTCGFMKIKSSSSNFWRLKVRDTRPGVQLETPWK*LHCMPLGISKNSFGPIVRLQ*LPSTKF  2897

Range 3: 2530 to 2892 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.5 bits(309) 0.0 67/121(55%) 0/121(0%) Minus/Minus
Query        5  IVYQILEFVKVMTRIARTKV*CKACAID*NGFLDSMKAHLPHVSIKLLMILLNGHLRANKNLVIIFQFLASECQRHSPTQTIGNAMEKVALHTSRHLKKLARFNCQAAVVSFNWISSLSNS  367
                +V +ILEF+KV+ R  R  V* +  AI  N FL+SMK HLPH S+KL MI LNGHL   ++ +IIFQFLA + Q + P +TIGN ME +ALH  RH KKL   NCQAA+++ N IS L+NS
Subject   2530  VVDEILEFMKVVARETRA*V*GETRAIHRNRFLNSMKTHLPHTSVKLFMIELNGHLWIYEDQIIIFQFLAPKGQGYPPWRTIGNPMEVIALHAPRHFKKLIWPNCQAAMITLNQISRLTNS  2892

Range 4: 2546 to 2890 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
115.6 bits(246) 0.0 59/115(51%) 0/115(0%) Minus/Minus
Query       21  CLSDP*ICESYDKNSKNKGLM*SLCH*LKWIS*FHEGPSATCFDQASHDFAQWALEG*QKFGHHLPVFGVGMSKTLSHSDNWKRHGKSCSAYLEASQKTR*VQLSGCSGFLQLDF  365
                C  DP*I ES  K +K+ GL *+ CH  K IS*FHE PSAT F QA HD AQWA     +  HHLP+FG   S   + + NWK HG +C A   A QKT   QLSGC+ + Q +F
Subject   2546  C**DP*IYESCGKRNKSIGLR*NSCHS*K*IS*FHEDPSATYFGQAFHD*AQWAPVDL*RSNHHLPIFGA*RSGIPALAYNWKPHGSNCIACP*AFQKTHLAQLSGCNDYPQPNF  2890

Range 5: 2726 to 2881 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.9 bits(155) 0.0 31/52(60%) 0/52(0%) Plus/Plus
Query      201  KCPLSKIMRSLIETCGRWAFMESRNPFQSMAQALHQTFVLAILVITFTNSRI  356
                +CPLS IM+SL E CGRW FME RN F  MA+   QT+ L  L  TF NSRI
Subject   2726  RCPLSSIMKSLTEVCGRWVFMELRNLFL*MARVSPQTYALVSLATTFINSRI  2881

Range 6: 2534 to 2704 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.3 bits(123) 0.0 31/57(54%) 0/57(0%) Plus/Plus
Query        9  LLRLEIQLKETTAA*QLNLASFLRCLEVCRATFSMAFPIV*VGECL*HSDAKNWKMM  179
                L+  EI L+   AA*QL   SFL+CL  C A  SM FPIV  G   *   AKNWKMM
Subject   2534  LVSREIWLRVIIAA*QLGQMSFLKCLGACNAITSMGFPIVRQGGYP*PLGAKNWKMM  2704

Range 7: 2568 to 2891 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.0 bits(214) 0.0 56/108(52%) 0/108(0%) Plus/Plus
Query       43  LQPDN*T*RVF*DASRYAEQLFPWRFQLSEWESVFDIPTPKTGR**PNFC*PSSAH*AKS*EA*SKHVADGPSWNQEIHFNQWHKLYIRPXXXXXXXXXXQIQGSDKQ  366
                LQPDN    VF*+A  +A QL PW FQL     + D+  PK GR** +    + AH*A+S*+A* K+VADG SWN EI+F +WH+ ++RP+ L  L  LS IQGS +Q
Subject   2568  LQPDNWAK*VF*NA*GHAMQLLPWGFQLYARAGIPDL*APKIGR**FDLHKSTGAH*AQS*KA*PKYVADGSSWN*EIYFYEWHEFHLRPMLLFLLPQLS*IQGSHQQ  2891

Grapevine rupestris stem pitting associated virus isolate ISA BR replicase, 24.4 kDa protein, 12.8 kDa protein, 8.4 kDa protein, and 28 kDa protein genes, complete cds

Sequence ID: KX925555.1 Length: 8659 Number of Matches: 7

Range 1: 2517 to 2876 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
267.3 bits(577) 0.0 103/120(86%) 0/120(0%) Plus/Plus
Query        8  VTKTRNPVEGNHCSLTIEPSEFFEMPRGMQSNFFHGVSNCLSGRVSLTFRRQKLEDDDQIFVSPQVPIEQNHEKLDRNMWQMGLHGIKKSISINGTSFTSDLCSCYSCHNFHKFKDLINN  367
                ++K+RN VEGNHCSLTI P+EFFEMPRGMQ N+FHGVSNC  GRVSLTFRRQKLEDDD IF++PQVPIE NHEKLDR+MWQMGLHGIKKSIS+NGTSFTSDLCSC+SCHNFHKFKDLINN
Subject   2517  ISKSRNLVEGNHCSLTIGPNEFFEMPRGMQCNYFHGVSNCTPGRVSLTFRRQKLEDDDLIFINPQVPIELNHEKLDRSMWQMGLHGIKKSISMNGTSFTSDLCSCFSCHNFHKFKDLINN  2876

Range 2: 2531 to 2881 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
163.3 bits(350) 0.0 85/117(73%) 0/117(0%) Minus/Minus
Query       22  LGLFIRSLNL*KL*QE*QEQRSDVKLVPLIEMDFLIP*RPICHMXXXXXXXXXSMGT*GLTKIWSSSSSFWRRNVKDTLPLRQLETPWKKLLCIPRGISKNSLGSIVRLQWFPSTGF  372
                L L +RSLNL*KL QE QE RS+VKLVP IE+DFLIP*RPICH+ RSSFS*  SMGT G  KI SSSS+FWR  VKDT P  QLETPWK L C+P GISKNS G IVRLQ  PST F
Subject   2531  LKLLMRSLNL*KLWQEKQEHRSEVKLVPFIEIDFLIP*RPICHILRSSFS*LSSMGTCGFMKIKSSSSNFWRLKVKDTRPGVQLETPWK*LHCMPLGISKNSFGPIVRLQ*LPSTKF  2881

Range 3: 2514 to 2876 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
142.2 bits(304) 0.0 67/121(55%) 0/121(0%) Minus/Minus
Query        5  IVYQILEFVKVMTRIARTKV*CKACAID*NGFLDSMKAHLPHVSIKLLMILLNGHLRANKNLVIIFQFLASECQRHSPTQTIGNAMEKVALHTSRHLKKLARFNCQAAVVSFNWISSLSNS  367
                +V +ILEF+KV+ R  R  V* K  AI  N FL+SMK HLPH S+KL MI LNGHL   ++ +IIFQ LA + Q + P +TIGN ME +ALH  RH KKL   NCQAA+++ N IS L+NS
Subject   2514  VVDEILEFMKVVARETRA*V*GKTRAIHRNRFLNSMKTHLPHTSVKLFMIELNGHLWIYEDQIIIFQLLAPKGQGYPPWRTIGNPMEVIALHAPRHFKKLIWPNCQAAMITLNQIS*LTNS  2876

Range 4: 2530 to 2874 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
116.1 bits(247) 0.0 59/115(51%) 0/115(0%) Minus/Minus
Query       21  CLSDP*ICESYDKNSKNKGLM*SLCH*LKWIS*FHEGPSATCFDQASHDFAQWALEG*QKFGHHLPVFGVGMSKTLSHSDNWKRHGKSCSAYLEASQKTR*VQLSGCSGFLQLDF  365
                C  DP*I ES  K +K+ GL *+ CH  K IS*FHE PSAT F QA HD AQWA     +  HHLP FG   S+  + + NWK HG +C A   A QKT   QLSGC+ + Q +F
Subject   2530  C**DP*IYESCGKRNKSIGLR*NSCHS*K*IS*FHEDPSATYFGQAFHD*AQWAPVDL*RSNHHLPTFGA*RSRIPALAYNWKPHGSNCIACP*AFQKTHLAQLSGCNDYPQPNF  2874

Range 5: 2710 to 2865 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.7 bits(161) 0.0 32/52(62%) 0/52(0%) Plus/Plus
Query      201  KCPLSKIMRSLIETCGRWAFMESRNPFQSMAQALHQTFVLAILVITFTNSRI  356
                +CPLS IM+SL E CGRW FME RN F  MA+ L QT+ L  L  TF NSRI
Subject   2710  RCPLSSIMKSLTEVCGRWVFMELRNLFL*MARVLPQTYALVSLATTFINSRI  2865

Range 6: 2518 to 2688 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.5 bits(117) 0.0 30/57(53%) 0/57(0%) Plus/Plus
Query        9  LLRLEIQLKETTAA*QLNLASFLRCLEVCRATFSMAFPIV*VGECL*HSDAKNWKMM  179
                L+  EI L+   AA*QL   SFL+CL  C A  SM FPIV  G   *   AK+WKMM
Subject   2518  LVSHEIWLRVIIAA*QLGQMSFLKCLGACNAITSMGFPIVRQGGYP*PLGAKSWKMM  2688

Range 7: 2552 to 2875 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
105.5 bits(224) 0.0 57/108(53%) 0/108(0%) Plus/Plus
Query       43  LQPDN*T*RVF*DASRYAEQLFPWRFQLSEWESVFDIPTPKTGR**PNFC*PSSAH*AKS*EA*SKHVADGPSWNQEIHFNQWHKLYIRPXXXXXXXXXXQIQGSDKQ  366
                LQPDN    VF*+A  +A QL PW FQL     + D+  PK GR** +    + AH*A+S*+A* K+VADG SWN EI+F +WH+ Y+RP+ L  L  LS IQGS +Q
Subject   2552  LQPDNWAK*VF*NA*GHAMQLLPWGFQLYARAGILDL*APKVGR**FDLHKSTGAH*AQS*KA*PKYVADGSSWN*EIYFYEWHEFYLRPMLLFLLPQLS*IQGSHQQ  2875

Nucleotide Sequence (426 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 33 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
43
86
129
172
215
258
301
344
387
426

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate SK704 A, complete genome

Sequence ID: KX274274.1 Length: 8725 Number of Matches: 8

Range 1: 7673 to 8095 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
285.6 bits(617) 0.0 126/141(89%) 0/141(0%) Minus/Plus
Query        2  PCIH*EGSVGRVEGFRG*PKG**N*LQLLKELNGKSSRKVAWRV**SI*SQA*GFRVSKGSKSSGSFQPASHS*WHSCQKEKSY*ECTLEDSGYA*SFKA*ICCTLPKCNG*GSNR*ADSCFWRVGHIRE*SI*RCNRYCT  424
                P  H    VGR EGFRG*PKG**N*LQLLKELNGKSSRKVAWRV**SI*SQA*GFRVSKGSKSSGSFQPASHS*WHSCQKEKSY*ECTLEDSGYA*SFKA*ICCTLPKCNG*GSNR*ADSCFWRVGH R+ ++* CNR+C+
Subject   7673  PSCHS*RGVGRSEGFRG*PKG**N*LQLLKELNGKSSRKVAWRV**SI*SQA*GFRVSKGSKSSGSFQPASHS*WHSCQKEKSY*ECTLEDSGYA*SFKA*ICCTLPKCNG*GSNR*ADSCFWRVGHSRKCAV*CCNRHCS  8095

Range 2: 7734 to 8090 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
273.2 bits(590) 0.0 111/119(93%) 0/119(0%) Plus/Minus
Query        7  NIYCNVKLITL*YARLSKSTNQLIYCSLIHYIWGEYNRFMP*NFTHIHCLRECILNNSFPFGKNATKNGRLVGNFRSFLSPC*L*SLKPGFICFIRLARQLSDLTCHLTLSTTVINFIN  363
                N+YCN+KL    YARLSKSTNQLIYCSLIHYIWGEYNRFMP*NFTHIHCLRECILNNSFPFGKNATK+GRLVGNFRSFLSPC*L*SLKPGFICFIRLARQLS LTCHLTLSTTVINFIN
Subject   7734  NVYCNIKLHIFGYARLSKSTNQLIYCSLIHYIWGEYNRFMP*NFTHIHCLRECILNNSFPFGKNATKSGRLVGNFRSFLSPC*L*SLKPGFICFIRLARQLSYLTCHLTLSTTVINFIN  8090

Range 3: 7681 to 8091 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
262.2 bits(566) 0.0 120/137(88%) 0/137(0%) Minus/Plus
Query        6  PLRRKCREG*RL*GLAKRLMKLITVVERVKWQVKSESCLASLMKHMKPGLRL*S*QGLKKLRKFPTSLPFLVAFLPKGKELLRMHSRRQWICVKF*GMNLLYSPQM*WMREQ*MS*FVLLESRAYQRVINLTLQ*IL  416
                P  ++C   *RL*GLAKRLMKLITVVERVKWQVK ESCLASLMKHMKPGLRL*S*QGLKKLRKFPTSLP LVAFLPKGKELLRMHSRRQWICVKF*GMNLLYSPQM*WMREQ*MS*FVLLESRA  ++ +L LQ* L
Subject   7681  PQLKRCWAV*RL*GLAKRLMKLITVVERVKWQVK*ESCLASLMKHMKPGLRL*S*QGLKKLRKFPTSLPLLVAFLPKGKELLRMHSRRQWICVKF*GMNLLYSPQM*WMREQ*MS*FVLLESRA*PKMCSLMLQ*TL  8091

Range 4: 7726 to 8091 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
250.3 bits(540) 0.0 113/122(93%) 0/122(0%) Plus/Minus
Query        6  QYLLQR*IDHSLICPTLQKHESAXXXXXXXXXXGRVQQIHALKLHAYPLSSRVHSQ*LFSFWQECH*EWEAGWKLPELFEPLLTLKP*AWLHMLH*TRQATFRLDLPFNSFNNCNQFHQPFG  371
                Q LLQ    H  +CPTLQKHESAHLLLPHPLHLGRVQQIHALKLHAYPLSSRVHSQ*LFSFWQECH*EWEAGWKLPELFEPLLTLKP*AWLHMLH*TRQATF LDLPFNSFNNCNQFHQPFG
Subject   7726  QCLLQHQTAHFRLCPTLQKHESAHLLLPHPLHLGRVQQIHALKLHAYPLSSRVHSQ*LFSFWQECH*EWEAGWKLPELFEPLLTLKP*AWLHMLH*TRQATFLLDLPFNSFNNCNQFHQPFG  8091

Range 5: 7863 to 8096 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
163.7 bits(351) 0.0 72/78(92%) 0/78(0%) Minus/Plus
Query        1  PEVSNQPPILSGILAKRKRVIENALSKTVDMREVLRHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIAQ  234
                PEVSNQPP LSGILAKRKRVIENALSKTVDMREVLRHESVVLSPNVMDEGAIDELIRAFGESGI+E+ QF+VAIDIA+
Subject   7863  PEVSNQPPTLSGILAKRKRVIENALSKTVDMREVLRHESVVLSPNVMDEGAIDELIRAFGESGIAENVQFDVAIDIAR  8096

Range 6: 7671 to 7808 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.7 bits(196) 0.0 42/46(91%) 0/46(0%) Minus/Plus
Query      289  ALASTEKEV*GGLKALGASQKVDEIDYSC*KS*MASQVGKLPGESN  426
                ALA+T KEV GGLKALG SQKVDEIDYSC*KS*MASQVGKLPGESN
Subject   7671  ALAATVKEVLGGLKALGVSQKVDEIDYSC*KS*MASQVGKLPGESN  7808

Range 7: 7862 to 8092 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
120.7 bits(257) 0.0 70/77(91%) 0/77(0%) Plus/Minus
Query        5  AISIATLN*SLSDMPDXXXXXXXXXXXXXXXTFGESTTDSCLKTSRISTVFESAFSITLFLLARMPLRMGGWLETSG  235
                A+SIAT N + S MPDSPKARISSSIAPSSITFGESTTDSCLKTSRISTVFESAFSITLFLLARMPLR+GGWLETSG
Subject   7862  AMSIATSNCTFSAMPDSPKARISSSIAPSSITFGESTTDSCLKTSRISTVFESAFSITLFLLARMPLRVGGWLETSG  8092

Range 8: 7673 to 7804 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
86.8 bits(183) 0.0 38/44(86%) 0/44(0%) Plus/Minus
Query      293  DSPGNFPT*LAI*LFQQL*SISSTFWLAPKAFNPPYTSFSVDAR  424
                DSPGNFPT*LAI*LFQQL*SISSTFWL PKAF PP TS +V AR
Subject   7673  DSPGNFPT*LAI*LFQQL*SISSTFWLTPKAFRPPNTSLTVAAR  7804

Grapevine rupestris stem pitting associated virus isolate VF1, partial genome

Sequence ID: KT948710.1 Length: 8716 Number of Matches: 8

Range 1: 7698 to 8093 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
252.2 bits(544) 0.0 111/132(84%) 0/132(0%) Minus/Plus
Query        5  VGRVEGFRG*PKG**N*LQLLKELNGKSSRKVAWRV**SI*SQA*GFRVSKGSKSSGSFQPASHS*WHSCQKEKSY*ECTLEDSGYA*SFKA*ICCTLPKCNG*GSNR*ADSCFWRVGHIRE*SI*RCNRYC  400
                VG  EGFRG*PK **N*LQLLKELNGKS+ KVAWRV *SI*SQ *GFRVSKGSKSSGSFQP SH+*WHSCQKEKS *ECTLEDSGYA*SFK *ICCT PKC+G*GSNR*ADSC W VGH R+ ++*RCNR+C
Subject   7698  VGWSEGFRG*PKS**N*LQLLKELNGKSNWKVAWRVK*SI*SQT*GFRVSKGSKSSGSFQPTSHT*WHSCQKEKSD*ECTLEDSGYA*SFKT*ICCTFPKCDG*GSNR*ADSCLWGVGHSRKCAV*RCNRHC  8093

Range 2: 7735 to 8091 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
251.7 bits(543) 0.0 104/119(87%) 0/119(0%) Plus/Minus
Query        7  NIYCNVKLITL*YARLSKSTNQLIYCSLIHYIWGEYNRFMP*NFTHIHCLRECILNNSFPFGKNATKNGRLVGNFRSFLSPC*L*SLKPGFICFIRLARQLSDLTCHLTLSTTVINFIN  363
                N+YCNVKL    YARL K TNQLIYCSLIH+IWG+YNRFM *NFTHIHCLRECILN+SFPFGKNATK GRLVGNFRSFLSPC*L*SLK GFICFI LARQLS+LTCHLTLSTTVINFIN
Subject   7735  NVYCNVKLRIFGYARLPKGTNQLIYCSLIHHIWGKYNRFMS*NFTHIHCLRECILNHSFPFGKNATKCGRLVGNFRSFLSPC*L*SLKSGFICFI*LARQLSNLTCHLTLSTTVINFIN  8091

Range 3: 7691 to 8092 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
238.0 bits(513) 0.0 111/134(83%) 0/134(0%) Minus/Plus
Query        6  RKCREG*RL*GLAKRLMKLITVVERVKWQVKSESCLASLMKHMKPGLRL*S*QGLKKLRKFPTSLPFLVAFLPKGKELLRMHSRRQWICVKF*GMNLLYSPQM*WMREQ*MS*FVLLESRAYQRVINLTLQ*IL  407
                ++C   *RL*GLAK+LMKLITVVERVKWQVK ESCLAS MKHMKP LRL*S*QGLKKLRKFPT+LP LVAFLPKGKE LRMHSRRQWICVKF* MNLLY PQM*WMREQ*MS*FV L SRA  ++ +LTLQ* L
Subject   7691  KRCWVV*RL*GLAKKLMKLITVVERVKWQVKLESCLASQMKHMKPDLRL*S*QGLKKLRKFPTNLPHLVAFLPKGKE*LRMHSRRQWICVKF*DMNLLYFPQM*WMREQ*MS*FVPLGSRA*PKMRSLTLQ*TL  8092

Range 4: 7864 to 8097 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
164.2 bits(352) 0.0 72/78(92%) 0/78(0%) Minus/Plus
Query        1  PEVSNQPPILSGILAKRKRVIENALSKTVDMREVLRHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIAQ  234
                PEVSNQPP LSGILAKRKRVIENALSKTVDMREVLRHESVVLSPNVMDEGAIDELIRAFGESGI+E+ QF+VAIDIA+
Subject   7864  PEVSNQPPTLSGILAKRKRVIENALSKTVDMREVLRHESVVLSPNVMDEGAIDELIRAFGESGIAENAQFDVAIDIAR  8097

Range 5: 7672 to 7809 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.3 bits(195) 0.0 41/46(89%) 0/46(0%) Minus/Plus
Query      289  ALASTEKEV*GGLKALGASQKVDEIDYSC*KS*MASQVGKLPGESN  426
                ALA+T KEV GGLKALG SQKVDEIDYSC*KS*MASQ+GKLPGESN
Subject   7672  ALAATVKEVLGGLKALGVSQKVDEIDYSC*KS*MASQIGKLPGESN  7809

Range 6: 7727 to 8092 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
228.3 bits(492) 0.0 102/122(84%) 0/122(0%) Plus/Minus
Query        6  QYLLQR*IDHSLICPTLQKHESAXXXXXXXXXXGRVQQIHALKLHAYPLSSRVHSQ*LFSFWQECH*EWEAGWKLPELFEPLLTLKP*AWLHMLH*TRQATFRLDLPFNSFNNCNQFHQPFG  371
                Q LLQR   H  +CPT Q+HESAHLLLPHP HLG+VQQIH LKLHAYPLSSRVHSQ LFSFWQECH* WE GWKLPELFEPLLTLKP* WLHMLH TRQATF+ DLPFNSFNNCNQFHQ FG
Subject   7727  QCLLQRQTAHFRLCPTPQRHESAHLLLPHPSHLGKVQQIHVLKLHAYPLSSRVHSQSLFSFWQECH*VWEVGWKLPELFEPLLTLKP*VWLHMLHLTRQATFQFDLPFNSFNNCNQFHQLFG  8092

Range 7: 7863 to 8093 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
117.9 bits(251) 0.0 69/77(90%) 0/77(0%) Plus/Minus
Query        5  AISIATLN*SLSDMPDXXXXXXXXXXXXXXXTFGESTTDSCLKTSRISTVFESAFSITLFLLARMPLRMGGWLETSG  235
                A+SIAT N + S MPDSPKARISSSIAPSSITFGESTTDSCLKTSRISTVFESAFSITLFLLARMPL +GGWLETSG
Subject   7863  AMSIATSNCAFSAMPDSPKARISSSIAPSSITFGESTTDSCLKTSRISTVFESAFSITLFLLARMPLSVGGWLETSG  8093

Range 8: 7674 to 7805 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.0 bits(177) 0.0 37/44(84%) 0/44(0%) Plus/Minus
Query      293  DSPGNFPT*LAI*LFQQL*SISSTFWLAPKAFNPPYTSFSVDAR  424
                DSPGNFP *LAI*LFQQL*SISSTFWL PKAF PP TS +V AR
Subject   7674  DSPGNFPI*LAI*LFQQL*SISSTFWLTPKAFRPPNTSLTVAAR  7805

Rupestris stem pitting associated virus isolate CNO9 28 kDa coat protein gene, complete cds

Sequence ID: DQ364981.1 Length: 867 Number of Matches: 8

Range 1: 8 to 364 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
274.2 bits(592) 0.0 111/119(93%) 0/119(0%) Plus/Minus
Query        7  NIYCNVKLITL*YARLSKSTNQLIYCSLIHYIWGEYNRFMP*NFTHIHCLRECILNNSFPFGKNATKNGRLVGNFRSFLSPC*L*SLKPGFICFIRLARQLSDLTCHLTLSTTVINFIN  363
                N+YCN+KL    YARLSKSTNQLIYCSLIHYIWGEYNRFMP*NFTHIHCLRECILNNSFPFGKNATK+GRLVGNFRSFLSPC*L*SLKP FICFIRLARQLSDLTCHLTLSTTVINFIN
Subject      8  NVYCNIKLHIFGYARLSKSTNQLIYCSLIHYIWGEYNRFMP*NFTHIHCLRECILNNSFPFGKNATKSGRLVGNFRSFLSPC*L*SLKPDFICFIRLARQLSDLTCHLTLSTTVINFIN  364

Range 2: 1 to 369 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
265.0 bits(572) 0.0 115/123(93%) 0/123(0%) Minus/Plus
Query        2  PKG**N*LQLLKELNGKSSRKVAWRV**SI*SQA*GFRVSKGSKSSGSFQPASHS*WHSCQKEKSY*ECTLEDSGYA*SFKA*ICCTLPKCNG*GSNR*ADSCFWRVGHIRE*SI*RCNRYCT  370
                PKG**N*LQLLKELNGKSSRKVAWRV**SI*SQA*GFRVSKGSKSSGSFQPASHS*WHSCQKEKSY*ECTLEDSGYA*SFKA*ICCTLPKCNG*GSNR*ADSCFWRVGH R+ ++* CNR+C+
Subject      1  PKG**N*LQLLKELNGKSSRKVAWRV**SI*SQA*GFRVSKGSKSSGSFQPASHS*WHSCQKEKSY*ECTLEDSGYA*SFKA*ICCTLPKCNG*GSNR*ADSCFWRVGHSRKCAV*CCNRHCS  369

Range 3: 3 to 365 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
246.7 bits(532) 0.0 111/121(92%) 0/121(0%) Minus/Plus
Query        6  KRLMKLITVVERVKWQVKSESCLASLMKHMKPGLRL*S*QGLKKLRKFPTSLPFLVAFLPKGKELLRMHSRRQWICVKF*GMNLLYSPQM*WMREQ*MS*FVLLESRAYQRVINLTLQ*IL  368
                KRLMKLITVVERVKWQVKSESCLASLMKHMK GLRL*S*QGLKKLRKFPTSLP LVAFLPKGKELLRMHSRRQWICVKF*GMNLLYSPQM*WMREQ*MS*FVLLESRA  ++ +L LQ* L
Subject      3  KRLMKLITVVERVKWQVKSESCLASLMKHMKSGLRL*S*QGLKKLRKFPTSLPLLVAFLPKGKELLRMHSRRQWICVKF*GMNLLYSPQM*WMREQ*MS*FVLLESRA*PKMCSLMLQ*TL  365

Range 4: 3 to 365 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
243.9 bits(526) 0.0 112/121(93%) 0/121(0%) Plus/Minus
Query        6  QYLLQR*IDHSLICPTLQKHESAXXXXXXXXXXGRVQQIHALKLHAYPLSSRVHSQ*LFSFWQECH*EWEAGWKLPELFEPLLTLKP*AWLHMLH*TRQATFRLDLPFNSFNNCNQFHQPF  368
                Q LLQ    H  +CPTLQKHESAHLLLPHPLHLGRVQQIHALKLHAYPLSSRVHSQ*LFSFWQECH*EWEAGWKLPELFEPLLTLKP*A LHMLH*TRQATFRLDLPFNSFNNCNQFHQPF
Subject      3  QCLLQHQTAHFRLCPTLQKHESAHLLLPHPLHLGRVQQIHALKLHAYPLSSRVHSQ*LFSFWQECH*EWEAGWKLPELFEPLLTLKP*A*LHMLH*TRQATFRLDLPFNSFNNCNQFHQPF  365

Range 5: 137 to 370 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
163.7 bits(351) 0.0 72/78(92%) 0/78(0%) Minus/Plus
Query        1  PEVSNQPPILSGILAKRKRVIENALSKTVDMREVLRHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIAQ  234
                PEVSNQPP LSGILAKRKRVIENALSKTVDMREVLRHESVVLSPNVMDEGAIDELIRAFGESGI+E+ QF+VAIDIA+
Subject    137  PEVSNQPPTLSGILAKRKRVIENALSKTVDMREVLRHESVVLSPNVMDEGAIDELIRAFGESGIAENVQFDVAIDIAR  370

Range 6: 2 to 82 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.9 bits(131) 0.0 27/27(100%) 0/27(0%) Minus/Plus
Query      289  QKVDEIDYSC*KS*MASQVGKLPGESN  369
                QKVDEIDYSC*KS*MASQVGKLPGESN
Subject      2  QKVDEIDYSC*KS*MASQVGKLPGESN  82

Range 7: 136 to 366 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
120.7 bits(257) 0.0 70/77(91%) 0/77(0%) Plus/Minus
Query        5  AISIATLN*SLSDMPDXXXXXXXXXXXXXXXTFGESTTDSCLKTSRISTVFESAFSITLFLLARMPLRMGGWLETSG  235
                A+SIAT N + S MPDSPKARISSSIAPSSITFGESTTDSCLKTSRISTVFESAFSITLFLLARMPLR+GGWLETSG
Subject    136  AMSIATSNCTFSAMPDSPKARISSSIAPSSITFGESTTDSCLKTSRISTVFESAFSITLFLLARMPLRVGGWLETSG  366

Range 8: 1 to 78 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.7 bits(124) 0.0 26/26(100%) 0/26(0%) Plus/Minus
Query      293  DSPGNFPT*LAI*LFQQL*SISSTFW  370
                DSPGNFPT*LAI*LFQQL*SISSTFW
Subject      1  DSPGNFPT*LAI*LFQQL*SISSTFW  78

Rupestris stem pitting associated virus isolate BL1 28 kDa coat protein gene, complete cds

Sequence ID: DQ364979.1 Length: 867 Number of Matches: 8

Range 1: 8 to 364 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
270.5 bits(584) 0.0 109/119(92%) 0/119(0%) Plus/Minus
Query        7  NIYCNVKLITL*YARLSKSTNQLIYCSLIHYIWGEYNRFMP*NFTHIHCLRECILNNSFPFGKNATKNGRLVGNFRSFLSPC*L*SLKPGFICFIRLARQLSDLTCHLTLSTTVINFIN  363
                N+YCN+KL    YARLSKSTNQL YCSLIHYIWGEYNRFMP*NFTH HCLRECILN+SFPFGKNATK+GRLVGNFRSFLSPC*L*SLKPGFICFIRLARQLSDLTCHLTLSTTVINFIN
Subject      8  NVYCNIKLHIFGYARLSKSTNQLTYCSLIHYIWGEYNRFMP*NFTHTHCLRECILNDSFPFGKNATKSGRLVGNFRSFLSPC*L*SLKPGFICFIRLARQLSDLTCHLTLSTTVINFIN  364

Range 2: 1 to 369 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
262.7 bits(567) 0.0 114/123(93%) 0/123(0%) Minus/Plus
Query        2  PKG**N*LQLLKELNGKSSRKVAWRV**SI*SQA*GFRVSKGSKSSGSFQPASHS*WHSCQKEKSY*ECTLEDSGYA*SFKA*ICCTLPKCNG*GSNR*ADSCFWRVGHIRE*SI*RCNRYCT  370
                PKG**N*LQLLKELNGKSSRKVAWRV**SI*SQA*GFRVSKGSKSSGSFQPASHS*WHSCQKEKS+*ECTLEDSGYA*SFKA*ICCTLPKCNG*GSNR*ADSCFWRVGH R+ ++* CNR+C+
Subject      1  PKG**N*LQLLKELNGKSSRKVAWRV**SI*SQA*GFRVSKGSKSSGSFQPASHS*WHSCQKEKSH*ECTLEDSGYA*SFKA*ICCTLPKCNG*GSNR*ADSCFWRVGHSRKCAV*CCNRHCS  369

Range 3: 3 to 365 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
250.8 bits(541) 0.0 113/121(93%) 0/121(0%) Plus/Minus
Query        6  QYLLQR*IDHSLICPTLQKHESAXXXXXXXXXXGRVQQIHALKLHAYPLSSRVHSQ*LFSFWQECH*EWEAGWKLPELFEPLLTLKP*AWLHMLH*TRQATFRLDLPFNSFNNCNQFHQPF  368
                Q LLQ    H  +CPTLQKHESAHLLLPHPLHLGRVQQIHALKLHAYPLSSRVHSQ*LFSFWQECH*EWEAGWKLPELFEPLLTLKP*AWLHMLH*TRQATFRLDLPFNSFNNCNQFHQPF
Subject      3  QCLLQHQTAHFRLCPTLQKHESAHLLLPHPLHLGRVQQIHALKLHAYPLSSRVHSQ*LFSFWQECH*EWEAGWKLPELFEPLLTLKP*AWLHMLH*TRQATFRLDLPFNSFNNCNQFHQPF  365

Range 4: 3 to 365 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
245.3 bits(529) 0.0 109/121(90%) 0/121(0%) Minus/Plus
Query        6  KRLMKLITVVERVKWQVKSESCLASLMKHMKPGLRL*S*QGLKKLRKFPTSLPFLVAFLPKGKELLRMHSRRQWICVKF*GMNLLYSPQM*WMREQ*MS*FVLLESRAYQRVINLTLQ*IL  368
                KRLMKLITVVERVKWQVKSESCLASLMKHMKPGLRL*S*QGLKKLRKFPTSLP LVAFLPKGKE LRMHSRRQW+CVKF*GMNLLYSPQM*WMREQ*+S*FVLLESRA  ++ +L LQ* L
Subject      3  KRLMKLITVVERVKWQVKSESCLASLMKHMKPGLRL*S*QGLKKLRKFPTSLPLLVAFLPKGKESLRMHSRRQWVCVKF*GMNLLYSPQM*WMREQ*VS*FVLLESRA*PKMCSLMLQ*TL  365

Range 5: 137 to 370 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
157.3 bits(337) 0.0 70/78(90%) 0/78(0%) Minus/Plus
Query        1  PEVSNQPPILSGILAKRKRVIENALSKTVDMREVLRHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIAQ  234
                PEVSNQPP LSGILAKRKRVIENALSKTV MREVLRHESVVLSPNVMDEGAI ELIRAFGESGI+E+ QF+VAIDIA+
Subject    137  PEVSNQPPTLSGILAKRKRVIENALSKTVGMREVLRHESVVLSPNVMDEGAIGELIRAFGESGIAENVQFDVAIDIAR  370

Range 6: 2 to 82 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.9 bits(131) 0.0 27/27(100%) 0/27(0%) Minus/Plus
Query      289  QKVDEIDYSC*KS*MASQVGKLPGESN  369
                QKVDEIDYSC*KS*MASQVGKLPGESN
Subject      2  QKVDEIDYSC*KS*MASQVGKLPGESN  82

Range 7: 136 to 366 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
117.0 bits(249) 0.0 67/77(87%) 0/77(0%) Plus/Minus
Query        5  AISIATLN*SLSDMPDXXXXXXXXXXXXXXXTFGESTTDSCLKTSRISTVFESAFSITLFLLARMPLRMGGWLETSG  235
                A+SIAT N + S MPDSPKARISS IAPSSITFGESTTDSCLKTSRI TVFESAFS+TLFLLARMPLR+GGWLETSG
Subject    136  AMSIATSNCTFSAMPDSPKARISSPIAPSSITFGESTTDSCLKTSRIPTVFESAFSMTLFLLARMPLRVGGWLETSG  366

Range 8: 1 to 78 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.7 bits(124) 0.0 26/26(100%) 0/26(0%) Plus/Minus
Query      293  DSPGNFPT*LAI*LFQQL*SISSTFW  370
                DSPGNFPT*LAI*LFQQL*SISSTFW
Subject      1  DSPGNFPT*LAI*LFQQL*SISSTFW  78

Rupestris stem pitting associated virus isolate NE423PM IV 28 kDa coat protein gene, complete cds

Sequence ID: DQ364989.1 Length: 867 Number of Matches: 8

Range 1: 8 to 364 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
268.2 bits(579) 0.0 110/119(92%) 0/119(0%) Plus/Minus
Query        7  NIYCNVKLITL*YARLSKSTNQLIYCSLIHYIWGEYNRFMP*NFTHIHCLRECILNNSFPFGKNATKNGRLVGNFRSFLSPC*L*SLKPGFICFIRLARQLSDLTCHLTLSTTVINFIN  363
                N+YCN+KL    YARLSKSTNQLIYCSLIHYI GEYNRFMP*NFTHI+CLRECILNNSFPFGKNATK+GRLVGNFRSFLSPC*L*SLKPGFICFIRLARQLSDLTCHLTLSTTVINFIN
Subject      8  NVYCNIKLHIFGYARLSKSTNQLIYCSLIHYIRGEYNRFMP*NFTHIYCLRECILNNSFPFGKNATKSGRLVGNFRSFLSPC*L*SLKPGFICFIRLARQLSDLTCHLTLSTTVINFIN  364

Range 2: 1 to 369 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
251.7 bits(543) 0.0 110/123(89%) 0/123(0%) Minus/Plus
Query        2  PKG**N*LQLLKELNGKSSRKVAWRV**SI*SQA*GFRVSKGSKSSGSFQPASHS*WHSCQKEKSY*ECTLEDSGYA*SFKA*ICCTLPKCNG*GSNR*ADSCFWRVGHIRE*SI*RCNRYCT  370
                P+ **N* QLLKELNGKSSRKVAWRV**SI*SQA*GFRVSKGSKSSGSFQPASHS*WHSCQKEKSY*ECTLEDS YA*SFKA*ICCTLP+CNG*GSNR*ADSCFWRVGH R+ ++* CNR+C+
Subject      1  PED**N*SQLLKELNGKSSRKVAWRV**SI*SQA*GFRVSKGSKSSGSFQPASHS*WHSCQKEKSY*ECTLEDSRYA*SFKA*ICCTLPECNG*GSNR*ADSCFWRVGHSRKCAV*CCNRHCS  369

Range 3: 3 to 365 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
240.3 bits(518) 0.0 109/121(90%) 0/121(0%) Minus/Plus
Query        6  KRLMKLITVVERVKWQVKSESCLASLMKHMKPGLRL*S*QGLKKLRKFPTSLPFLVAFLPKGKELLRMHSRRQWICVKF*GMNLLYSPQM*WMREQ*MS*FVLLESRAYQRVINLTLQ*IL  368
                +RLMKLITVVERVKWQVKSESCLASLMKHMKPGLRL*S*QGLKKLRKFPTSLP LVAFLPKGKELLRMHSRRQ ICVKF*GMNLLYSP+M*WMREQ*MS*FVLLESRA  ++ +L LQ* L
Subject      3  RRLMKLITVVERVKWQVKSESCLASLMKHMKPGLRL*S*QGLKKLRKFPTSLPLLVAFLPKGKELLRMHSRRQ*ICVKF*GMNLLYSPRM*WMREQ*MS*FVLLESRA*PKMCSLMLQ*TL  365

Range 4: 9 to 365 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
238.0 bits(513) 0.0 108/119(91%) 0/119(0%) Plus/Minus
Query        6  QYLLQR*IDHSLICPTLQKHESAXXXXXXXXXXGRVQQIHALKLHAYPLSSRVHSQ*LFSFWQECH*EWEAGWKLPELFEPLLTLKP*AWLHMLH*TRQATFRLDLPFNSFNNCNQFHQ  362
                Q LLQ    H  +CPTLQKHESAHLLLPHPLH GRVQQIHALKLHAY LSSRVHSQ*LFSFWQECH*EWEAGWKLPELFEPLLTLKP*AWLHMLH*TRQATFRLDLPFNSFNNC+QFHQ
Subject      9  QCLLQHQTAHFRLCPTLQKHESAHLLLPHPLHSGRVQQIHALKLHAYLLSSRVHSQ*LFSFWQECH*EWEAGWKLPELFEPLLTLKP*AWLHMLH*TRQATFRLDLPFNSFNNCDQFHQ  365

Range 5: 137 to 370 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
163.7 bits(351) 0.0 72/78(92%) 0/78(0%) Minus/Plus
Query        1  PEVSNQPPILSGILAKRKRVIENALSKTVDMREVLRHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIAQ  234
                PEVSNQPP LSGILAKRKRVIENALSKTVDMREVLRHESVVLSPNVMDEGAIDELIRAFGESGI+E+ QF+VAIDIA+
Subject    137  PEVSNQPPTLSGILAKRKRVIENALSKTVDMREVLRHESVVLSPNVMDEGAIDELIRAFGESGIAENVQFDVAIDIAR  370

Range 6: 2 to 82 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
60.2 bits(125) 0.0 25/27(93%) 0/27(0%) Minus/Plus
Query      289  QKVDEIDYSC*KS*MASQVGKLPGESN  369
                QK+DEID+SC*KS*MASQVGKLPGESN
Subject      2  QKIDEIDHSC*KS*MASQVGKLPGESN  82

Range 7: 136 to 366 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
120.7 bits(257) 0.0 70/77(91%) 0/77(0%) Plus/Minus
Query        5  AISIATLN*SLSDMPDXXXXXXXXXXXXXXXTFGESTTDSCLKTSRISTVFESAFSITLFLLARMPLRMGGWLETSG  235
                A+SIAT N + S MPDSPKARISSSIAPSSITFGESTTDSCLKTSRISTVFESAFSITLFLLARMPLR+GGWLETSG
Subject    136  AMSIATSNCTFSAMPDSPKARISSSIAPSSITFGESTTDSCLKTSRISTVFESAFSITLFLLARMPLRVGGWLETSG  366

Range 8: 1 to 78 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.0 bits(118) 0.0 25/26(96%) 0/26(0%) Plus/Minus
Query      293  DSPGNFPT*LAI*LFQQL*SISSTFW  370
                DSPGNFPT*LAI*LFQQL*SISS FW
Subject      1  DSPGNFPT*LAI*LFQQL*SISSIFW  78

Nucleotide Sequence (756 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 33 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
76
152
228
304
380
456
532
608
684
756

Descriptions

Alignments

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 10

Range 1: 2956 to 3684 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
581.2 bits(1262) 0.0 241/243(99%) 0/243(0%) Plus/Plus
Query       27  GTGLSQVLAMPRSKKQSILVLEGALSLETDYGPKILGSFEVFKGDFNIKKIEDSSIFVISYRAPVRSTGKLRVHKSACSFSGSRELLLDCQIEASADFEIEDFNTFPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDPALSSPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPS  755
                GTGLSQVLAMPRSKKQSILVLEGALSLETDYGPKILGSFEVFKGDFNIKKIEDSSIFVISYRAPVRSTGKLRVHKSACSFSGSRELLL CQIEASADFEIEDFNTFPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDPALS+PTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPS
Subject   2956  GTGLSQVLAMPRSKKQSILVLEGALSLETDYGPKILGSFEVFKGDFNIKKIEDSSIFVISYRAPVRSTGKLRVHKSACSFSGSRELLLGCQIEASADFEIEDFNTFPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDPALSNPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPS  3684

Range 2: 2956 to 3684 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
523.9 bits(1137) 0.0 233/243(96%) 0/243(0%) Minus/Minus
Query       27  AGPT*VIEHVYLTPSKC*CNSCNHAAIKRGTRLKMIGL*TQNST*RPFILPKLPAHFIFWRYNDQSHMMPNTE*GNHFIFCISVFTKLLPYSWA*KSWINW*FTFHKRSYSCLQS*TICXXXXXXXXXXXVTITRHRKSVEVFNFKVS*CLNLTVQ*QLP*PRK*ACRFVNS*LACGSDWSPVRYHKYGAIFYLFNVKIPLKNFK*SQDFWTVVSF*RKGPFKNKD*LFLASWHGQNL*QARP  755
                AGPT*VIEHVYLTPSKC*CNSCNHAAIKRGTRLKMIGL*TQNST*RPFILPKLPAHFIFWRYNDQSHMMPNTE*GNHFIFCIS+FTKLLPYSW *KSWIN *FTFHKR YS LQS*TICAKKK N*VPKAVTITRHRKSVEVFNFKVS*CLNLT Q*QLP*PRK*ACRFVNS*LACGSDWSPVRYHKYGAIFYLFNV+IP KNFK*SQDFWTVVSF*RKGPFKNKD*LFLASWHGQNL*QA P
Subject   2956  AGPT*VIEHVYLTPSKC*CNSCNHAAIKRGTRLKMIGL*TQNST*RPFILPKLPAHFIFWRYNDQSHMMPNTE*GNHFIFCISIFTKLLPYSWV*KSWINR*FTFHKRPYSRLQS*TICAKKKTN*VPKAVTITRHRKSVEVFNFKVS*CLNLTAQ*QLP*PRK*ACRFVNS*LACGSDWSPVRYHKYGAIFYLFNVEIPFKNFK*SQDFWTVVSF*RKGPFKNKD*LFLASWHGQNL*QAGP  3684

Range 3: 2954 to 3484 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
395.6 bits(857) 0.0 168/177(95%) 0/177(0%) Minus/Minus
Query       25  HDA*HRIRQSFHFLHKRFHQVASV*LGLKELDQLVIHFPQTILFLPSKLDHLC*EESQLSAKSSYHHQAQEKC*SLQFQSQLMPQFDSPITAPLTQKMSMQICELLACLWI*LEPCKISQIWSYLLSF*C*NPP*KLQMIPRFLDRSQFLKKGPLQEQGLTVSCFLAWPELVTGPSR  555
                HDA*HRIRQSFHFLHK FHQVASV*LGLKELDQ VIHFPQT LF PSKLDHLC*EE+QLSAKSSYHHQAQEKC*SLQFQSQLMPQFDSPIT PLTQKMSMQICELLACLWI*LEPCKISQIWSYLLSF*C*NP *KLQMIPRFLDRSQFLKKGPLQEQGLTVSCFLAWPELVTG S+
Subject   2954  HDA*HRIRQSFHFLHKHFHQVASV*LGLKELDQPVIHFPQTTLFPPSKLDHLC*EENQLSAKSSYHHQAQEKC*SLQFQSQLMPQFDSPITTPLTQKMSMQICELLACLWI*LEPCKISQIWSYLLSF*C*NPL*KLQMIPRFLDRSQFLKKGPLQEQGLTVSCFLAWPELVTGRSQ  3484

Range 4: 3527 to 3685 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
129.4 bits(276) 0.0 52/53(98%) 0/53(0%) Minus/Minus
Query      598  CWAYISN*ARLPHAFQVLMQ*L*SCSH*EGHKVENDWTLNTEFHIEAIHSPQT  756
                CWAYISN*ARLPHAFQVLMQ*L*SCSH*EGHKVENDWTLNT+FHIEAIHSPQT
Subject   3527  CWAYISN*ARLPHAFQVLMQ*L*SCSH*EGHKVENDWTLNTKFHIEAIHSPQT  3685

Range 5: 3264 to 3683 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
290.2 bits(627) 0.0 138/140(99%) 0/140(0%) Minus/Minus
Query      335  LGLHK*LSTSTSRLPSADAIAVIMQPLRGAQG*K*LDFKHRIPHRGHSFSPNFQLTSYSGVIMISLT*CLTQNKXXXXXXXXXXSPSCFRIVGLERAGSTGDSLSTNDLIPAFKARPSVLRRKPTECQKQLPSPGTGKVL  754
                LGLHK*LSTSTSRLPSADAIAVIMQPLRGAQG*K*LDFKH+IPHRGHSFSPNFQLTSYSGVIMISLT*CLTQNKAIISFSA*AFSPSCFRIVG ERAGSTGDSLSTNDLIPAFKARPSVLRRKPTECQKQLPSPGTGKVL
Subject   3264  LGLHK*LSTSTSRLPSADAIAVIMQPLRGAQG*K*LDFKHKIPHRGHSFSPNFQLTSYSGVIMISLT*CLTQNKAIISFSA*AFSPSCFRIVGFERAGSTGDSLSTNDLIPAFKARPSVLRRKPTECQKQLPSPGTGKVL  3683

Range 6: 2955 to 3218 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
202.7 bits(436) 0.0 87/88(99%) 0/88(0%) Minus/Minus
Query       26  NNSSLDPENEHADL*TLSLPVDLTGAL*DITNMELSSIFLMLKSPLKTSNDPKIFGP*SVSKERAPSRTRIDCFLLLGMARTCDRPVP  289
                NN+SLDPENEHADL*TLSLPVDLTGAL*DITNMELSSIFLMLKSPLKTSNDPKIFGP*SVSKERAPSRTRIDCFLLLGMARTCDRPVP
Subject   2955  NNNSLDPENEHADL*TLSLPVDLTGAL*DITNMELSSIFLMLKSPLKTSNDPKIFGP*SVSKERAPSRTRIDCFLLLGMARTCDRPVP  3218

Range 7: 3342 to 3683 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
259.0 bits(559) 0.0 109/114(96%) 0/114(0%) Plus/Plus
Query      413  FEGRNKIVCGK*ITS*SSSFKPNYTEATW*KRLCRK*NDCLILC*ASCETDHYNARI*SELEVWGE*MASMWNSVFKVQSFSTLCPS*WLHDYSYCISTWKA*GRRAQLLM*AQ  754
                FEG NK+VCGK*IT *SSSFKPNYTEATW*K LCRK*NDCLILC*ASCETDHYNARI*SELEVWGE*MASMWN VFKVQSFSTLCPS*WLHDYSYCISTWKA*GRRAQLLM*AQ
Subject   3342  FEGGNKVVCGK*ITG*SSSFKPNYTEATW*KCLCRK*NDCLILC*ASCETDHYNARI*SELEVWGE*MASMWNFVFKVQSFSTLCPS*WLHDYSYCISTWKA*GRRAQLLM*AQ  3683

Range 8: 2958 to 3281 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
232.5 bits(501) 0.0 104/108(96%) 0/108(0%) Plus/Plus
Query       29  DGPVTSSGHAKKQETVNPCS*RGPFFRN*LRSKNLGII*SF*GGF*H*KDRR*LHICDILQGSSQIHRQAKSSQICMLIFWVKGAVIGLSN*GIS*L*N*RLQHFSCA  352
                D PVTSSGHAKKQETVNPCS*RGPFFRN*LRSKNLGII*SF* GF H*KDRR*LHICDILQGSSQIHRQAKSSQICMLIFWVKG VIGLSN*GIS*L*N*RLQHFSCA
Subject   2958  DRPVTSSGHAKKQETVNPCS*RGPFFRN*LRSKNLGII*SF*RGFQH*KDRR*LHICDILQGSSQIHRQAKSSQICMLIFWVKGVVIGLSN*GIS*L*N*RLQHFSCA  3281

Range 9: 2957 to 3598 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
431.8 bits(936) 0.0 204/214(95%) 0/214(0%) Plus/Plus
Query       28  GRACHKFWPCQEARNSQSLFLKGPFL*KLTTVQKSWDHLKFLRGILTLKR*KIAPYL*YLTGLQSDPQAS*EFTNLHAHFLGQGSCYWTVKLRHQXXXXXXXXXXXXXXVMVTAFGTQLAFFLAQMV*L*RQE*DRLWKVNHQLIQLFQAQLYGSNLVKTLMQKMK*LPYSVLGIM*D*SL*RQNMK*AGSLGRMNGLYVEFCV*SPIIFNLVP  669
                G ACHKFWPCQEARNSQSLFLKGPFL*KLTTVQKSWDHLKFL+GI TLKR*KIAPYL*YLTGLQSDPQAS*EFTNLHAHFLGQGSCYW VKLRHQLTLKLKTSTLFLCLVMVTAFGTQL FFLAQMV*L*R+E* RLWKVNH+LIQLFQ QLYGSNLVK LMQKMK*LPYSVLGIM*D*SL*RQNMK*AGSLGRMNGLYVEFCV*SPIIFNLVP
Subject   2957  GPACHKFWPCQEARNSQSLFLKGPFL*KLTTVQKSWDHLKFLKGISTLKR*KIAPYL*YLTGLQSDPQAS*EFTNLHAHFLGQGSCYWAVKLRHQLTLKLKTSTLFLCLVMVTAFGTQLVFFLAQMV*L*RRE*GRLWKVNHRLIQLFQTQLYGSNLVKMLMQKMK*LPYSVLGIM*D*SL*RQNMK*AGSLGRMNGLYVEFCV*SPIIFNLVP  3598

Range 10: 3641 to 3685 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.7 bits(76) 0.0 15/15(100%) 0/15(0%) Plus/Plus
Query      712  EGVR*TCSITYVGPA  756
                EGVR*TCSITYVGPA
Subject   3641  EGVR*TCSITYVGPA  3685

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 10

Range 1: 2956 to 3684 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
572.0 bits(1242) 0.0 237/243(98%) 0/243(0%) Plus/Plus
Query       27  GTGLSQVLAMPRSKKQSILVLEGALSLETDYGPKILGSFEVFKGDFNIKKIEDSSIFVISYRAPVRSTGKLRVHKSACSFSGSRELLLDCQIEASADFEIEDFNTFPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDPALSSPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPS  755
                GTGLSQVLAMPRSKKQSILVLEGALSLETDYGPKILGSFEVFKGDF+IKKIED SIFVISYRAPVRSTGKLRVHKS CSFSGSRELLL C IEASADFEIEDFNTFPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDPALS PTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPS
Subject   2956  GTGLSQVLAMPRSKKQSILVLEGALSLETDYGPKILGSFEVFKGDFSIKKIEDGSIFVISYRAPVRSTGKLRVHKSTCSFSGSRELLLGCPIEASADFEIEDFNTFPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDPALSGPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPS  3684

Range 2: 2955 to 3683 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
460.2 bits(998) 0.0 227/243(93%) 0/243(0%) Minus/Minus
Query       26  LGLHK*LSTSTSRLPSADAIAVIMQPLRGAQG*K*LDFKHRIPHRGHSFSPNFQLTSYSGVIMISLT*CLTQNKXXXXXXXXXXSPSCFRIVGLERAGSTGDSLSTNDLIPAFKARPSVLRRKPTECQKQLPSPGTGKVLXXXXXXXXXXXXXXSNNSSLDPENEHADL*TLSLPVDLTGAL*DITNMELSSIFLMLKSPLKTSNDPKIFGP*SVSKERAPSRTRIDCFLLLGMARTCDRPVP  754
                LGLHK*LSTSTSRLPSADA+AVIMQPLRGAQG*K* DFKH+IPHRGHSFSPNFQLTSYSGVI+ISLT CLTQNKAIISFSA*AFSPSCFR+VG ERAGSTGDSLSTNDLIPAFKA+PSVLRRKPTECQKQLPSPGTGKVLKSSISKSADASI Q NN+SLDPENEH DL*TLSLPVDLTGAL*DIT ME SSIFL+LKSPLKTSNDPKIFGP*SVSKERAPSRTRIDCFLLLG+ARTCDRPVP
Subject   2955  LGLHK*LSTSTSRLPSADAMAVIMQPLRGAQG*K*FDFKHKIPHRGHSFSPNFQLTSYSGVIIISLTWCLTQNKAIISFSA*AFSPSCFRMVGPERAGSTGDSLSTNDLIPAFKAKPSVLRRKPTECQKQLPSPGTGKVLKSSISKSADASIGQPNNNSLDPENEHVDL*TLSLPVDLTGAL*DITKMEPSSIFLILKSPLKTSNDPKIFGP*SVSKERAPSRTRIDCFLLLGIARTCDRPVP  3683

Range 3: 3331 to 3684 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
245.8 bits(530) 0.0 97/118(82%) 0/118(0%) Minus/Minus
Query      402  AGPT*VIEHVYLTPSKC*CNSCNHAAIKRGTRLKMIGL*TQNST*RPFILPKLPAHFIFWRYNDQSHMMPNTE*GNHFIFCISVFTKLLPYSWA*KSWINW*FTFHKRSYSCLQS*TI  755
                A PT +IEHVYLTPSKC*CN CNHAAIKRGTRLKMI L TQNST*RP I PKLPAH IFW YN+QSHM+PN E*GNHFIFC+S+FTKLLPY WA KSWINW*FTFH+R YSCLQS T+
Subject   3331  AWPTQIIEHVYLTPSKC*CNGCNHAAIKRGTRLKMI*LQTQNST*RPLIFPKLPAHLIFWCYNNQSHMVPNAE*GNHFIFCVSIFTKLLPYGWARKSWINW*FTFHERPYSCLQSQTV  3684

Range 4: 2956 to 3291 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
213.2 bits(459) 0.0 92/112(82%) 0/112(0%) Minus/Minus
Query       27  TITRHRKSVEVFNFKVS*CLNLTVQ*QLP*PRK*ACRFVNS*LACGSDWSPVRYHKYGAIFYLFNVKIPLKNFK*SQDFWTVVSF*RKGPFKNKD*LFLASWHGQNL*QARP  362
                TITRHRKSVEVFNF++S*CLN   Q*QLP P K*ACRFVNS*LA  SDWSPVRY+K G IFYLFN +IP KNFK*SQDFWTVVSF*RKGPFK+KD LFLASWH Q+L*QA P
Subject   2956  TITRHRKSVEVFNFEIS*CLNRAAQ*QLPRPGK*ACRFVNS*LAS*SDWSPVRYYKDGTIFYLFNTEIPFKNFK*SQDFWTVVSF*RKGPFKDKDRLFLASWHSQDL*QAGP  3291

Range 5: 2954 to 3484 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
315.4 bits(682) 0.0 143/177(81%) 0/177(0%) Minus/Minus
Query       25  HDA*HRIRQSFHFLHKRFHQVASV*LGLKELDQLVIHFPQTILFLPSKLDHLC*EESQLSAKSSYHHQAQEKC*SLQFQSQLMPQFDSPITAPLTQKMSMQICELLACLWI*LEPCKISQIWSYLLSF*C*NPP*KLQMIPRFLDRSQFLKKGPLQEQGLTVSCFLAWPELVTGPSR  555
                H A* RIRQSFHFL K FHQVASV LG KELDQLVIHFP+T LFLPSK +  C*EESQLSAKSSYHHQAQEKC*SLQF++QLMPQ  SPIT P T+KMSM ICELLAC  I*LEPCKI Q W++LLSF* *NP *KLQMIPRFLDRSQFLKKGPLQ QG TVSCFLA P LVTG S+
Subject   2954  HGA*RRIRQSFHFLRKHFHQVASVWLGPKELDQLVIHFPRTTLFLPSKPNRRC*EESQLSAKSSYHHQAQEKC*SLQFRNQLMPQSGSPITTPSTRKMSM*ICELLACQLI*LEPCKILQRWNHLLSF*Y*NPL*KLQMIPRFLDRSQFLKKGPLQGQGSTVSCFLA*PGLVTGRSQ  3484

Range 6: 3527 to 3685 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.9 bits(216) 0.0 43/53(81%) 0/53(0%) Minus/Minus
Query      598  CWAYISN*ARLPHAFQVLMQ*L*SCSH*EGHKVENDWTLNTEFHIEAIHSPQT  756
                C AY +N*ARLPHAFQVLMQ L*SCSH*EGHK END T NT+FHIEA H PQT
Subject   3527  CLAYTNN*ARLPHAFQVLMQWL*SCSH*EGHKAENDLTSNTKFHIEATHFPQT  3685

Range 7: 3342 to 3683 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
216.0 bits(465) 0.0 93/114(82%) 0/114(0%) Plus/Plus
Query      413  FEGRNKIVCGK*ITS*SSSFKPNYTEATW*KRLCRK*NDCLILC*ASCETDHYNARI*SELEVWGE*MASMWNSVFKVQSFSTLCPS*WLHDYSYCISTWKA*GRRAQLLM*AQ  754
                FEGRNK+V GK*ITS*SSSF PN+TEATW*K L RK*NDCLIL *A CETD+YN RI* ELEVWG+*+ASMWN VF+V+SFS LCPS*WLHDYS+CISTWKA*GRRAQL +*A+
Subject   3342  FEGRNKVVRGK*ITS*SSSFGPNHTEATW*KCLRRK*NDCLILR*APCETDYYNTRI*GELEVWGK*VASMWNFVFEVKSFSALCPS*WLHDYSHCISTWKA*GRRAQLFV*AK  3683

Range 8: 2958 to 3281 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
183.9 bits(395) 0.0 86/108(80%) 0/108(0%) Plus/Plus
Query       29  DGPVTSSGHAKKQETVNPCS*RGPFFRN*LRSKNLGII*SF*GGF*H*KDRR*LHICDILQGSSQIHRQAKSSQICMLIFWVKGAVIGLSN*GIS*L*N*RLQHFSCA  352
                D PVTS G+AKKQETV+PC *RGPFFRN*LRSKNLGII*SF* GF +*KDRR  H+C+ILQGSSQI+ QAKSSQI MLIF V+G VIGL +*GIS*  N*RLQHFSCA
Subject   2958  DRPVTSPGYAKKQETVDPCP*RGPFFRN*LRSKNLGII*SF*RGFQY*KDRRWFHLCNILQGSSQINWQAKSSQIYMLIFRVEGVVIGLPD*GIS*FRN*RLQHFSCA  3281

Range 9: 2957 to 3598 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
359.4 bits(778) 0.0 175/214(82%) 0/214(0%) Plus/Plus
Query       28  GRACHKFWPCQEARNSQSLFLKGPFL*KLTTVQKSWDHLKFLRGILTLKR*KIAPYL*YLTGLQSDPQAS*EFTNLHAHFLGQGSCYWTVKLRHQXXXXXXXXXXXXXXVMVTAFGTQLAFFLAQMV*L*RQE*DRLWKVNHQLIQLFQAQLYGSNLVKTLMQKMK*LPYSVLGIM*D*SL*RQNMK*AGSLGRMNGLYVEFCV*SPIIFNLVP  669
                G ACHK W CQEARNS+SL LKGPFL*KLTTVQKSWDHLKFL+GI  LKR*K+ P L*YLTGLQSD  AS*EFTNLHAHF G+GSCYW  +LRHQL  KLKTSTLFLCLVMVTAFGTQLAFF A  V L*RQE* R WKVNHQLIQLF+AQ YGSNLVK L QKMK*LPYS LG M*D* L* QNM+*AGSLG+M+GLYVEFCV*S IIF+LVP
Subject   2957  GPACHKSWLCQEARNSRSLSLKGPFL*KLTTVQKSWDHLKFLKGISVLKR*KMVPSL*YLTGLQSDQLAS*EFTNLHAHFPGRGSCYWAARLRHQLISKLKTSTLFLCLVMVTAFGTQLAFFSAPTVWL*RQE*GRSWKVNHQLIQLFRAQPYGSNLVKMLTQKMK*LPYSALGTM*D*LL*HQNMR*AGSLGKMSGLYVEFCV*SQIIFSLVP  3598

Range 10: 3641 to 3685 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
27.2 bits(53) 0.0 12/15(80%) 0/15(0%) Plus/Plus
Query      712  EGVR*TCSITYVGPA  756
                EGVR*TCSI  VG A
Subject   3641  EGVR*TCSIICVGQA  3685

Grapevine rupestris stem pitting associated virus isolate SK30, complete genome

Sequence ID: KX274277.1 Length: 8724 Number of Matches: 11

Range 1: 2956 to 3684 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
524.8 bits(1139) 0.0 211/243(87%) 0/243(0%) Plus/Plus
Query       27  GTGLSQVLAMPRSKKQSILVLEGALSLETDYGPKILGSFEVFKGDFNIKKIEDSSIFVISYRAPVRSTGKLRVHKSACSFSGSRELLLDCQIEASADFEIEDFNTFPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDPALSSPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPS  755
                G GL +VL MPRSKKQSILVLEGALS+ETDYGPK+LGSFEVFKGDFNIKK+E+ SIFVI+Y+APVRSTGKLRVHK+ CSFSGS+E+LL CQIEA AD++I+DFNTF VPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESE  V P LS+PTI KQLGEN YAENEMIALFC+RHHVRLI+ITPEYEVSWKFGE+EWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLC+PS
Subject   2956  GPGLPKVLEMPRSKKQSILVLEGALSVETDYGPKVLGSFEVFKGDFNIKKMEEGSIFVITYKAPVRSTGKLRVHKTECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESECLVSPNLSAPTIHKQLGENVYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCKPS  3684

Range 2: 3264 to 3683 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
218.7 bits(471) 0.0 108/140(77%) 0/140(0%) Minus/Minus
Query      335  LGLHK*LSTSTSRLPSADAIAVIMQPLRGAQG*K*LDFKHRIPHRGHSFSPNFQLTSYSGVIMISLT*CLTQNKXXXXXXXXXXSPSCFRIVGLERAGSTGDSLSTNDLIPAFKARPSVLRRKPTECQKQLPSPGTGKVL  754
                LGLH+* STSTSRLP+A+A+AVIMQP  GA G K* D + RIPHRGHS SPNFQLTSYSGVI ISLT CL QNKAIISFSA* FSP+C  +VG ER G T  SLST D IPAFKARPSVL +KPTECQKQLPSPGT KVL
Subject   3264  LGLHR*FSTSTSRLPNAEAMAVIMQPFSGAHGWK*FDLRQRIPHRGHSLSPNFQLTSYSGVITISLTWCLMQNKAIISFSA*TFSPNCL*MVGAERFGLTRHSLSTKDRIPAFKARPSVLSKKPTECQKQLPSPGTEKVL  3683

Range 3: 2955 to 3218 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.9 bits(310) 0.0 63/88(72%) 0/88(0%) Minus/Minus
Query       26  NNSSLDPENEHADL*TLSLPVDLTGAL*DITNMELSSIFLMLKSPLKTSNDPKIFGP*SVSKERAPSRTRIDCFLLLGMARTCDRPVP  289
                +N+SLDPENEH+ L TL+LPVDLTGAL  IT ME SSIFLMLKSPL TS DP+ FGP*SVS ++APSRTR+DCFLL G+++T  RP P
Subject   2955  SNTSLDPENEHSVLWTLNLPVDLTGALYVITKMEPSSIFLMLKSPLNTSKDPRTFGP*SVSTDKAPSRTRMDCFLLRGISKTLGRPGP  3218

Range 4: 3331 to 3684 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
122.5 bits(261) 0.0 56/118(47%) 0/118(0%) Minus/Minus
Query      402  AGPT*VIEHVYLTPSKC*CNSCNHAAIKRGTRLKMIGL*TQNST*RPFILPKLPAHFIFWRYNDQSHMMPNTE*GNHFIFCISVFTKLLPYSWA*KSWINW*FTFHKRSYSCLQS*TI  755
                AG   +I+HV  TP +C* N C+HA I+ G  L++I   T+NST* P  LPKLP  FIFW  + Q HM+PN +*GNH I  I++ ++L    W+*+ W    FT HKRS + L   TI
Subject   3331  AGLAQIIQHVNFTPPQC*SNGCDHATIQWGAWLEVI*FKTKNST*GPLTLPKLPTDFIFWCDHYQPHMVPNAK*GNHLILGINILSQLFVNGWS*EVWTY*AFTLHKRSNTSL*GKTI  3684

Range 5: 2983 to 3291 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
95.9 bits(203) 0.0 46/103(45%) 0/103(0%) Minus/Minus
Query       54  TITRHRKSVEVFNFKVS*CLNLTVQ*QLP*PRK*ACRFVNS*LACGSDWSPVRYHKYGAIFYLFNVKIPLKNFK*SQDFWTVVSF*RKGPFKNKD*LFLASWH  362
                TITRHR+ +E+ N  +S C NL     L  P K*A  FV+   A GS+WS + YHK GA  +  +V++P +  K SQ+ WT+V     G FKN D L LA  H
Subject   2983  TITRHREGIEIINIIISTCFNLAA*QHLLGPGK*AFSFVDPQFAGGSNWSLICYHKNGAFLHFLDVEVPFEYLKRSQNLWTIVCLH**GTFKN*DGLLLAPGH  3291

Range 6: 3044 to 3484 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
134.4 bits(287) 0.0 70/147(48%) 0/147(0%) Minus/Minus
Query      115  HDA*HRIRQSFHFLHKRFHQVASV*LGLKELDQLVIHFPQTILFLPSKLDHLC*EESQLSAKSSYHHQAQEKC*SLQFQSQLMPQFDSPITAPLTQKMSMQICELLACLWI*LEPCKISQIWSYLLSF*C*NPP*KLQMIPRFLDRS  555
                H A* +IRQS H  HK    +    L L+ LD L IH PQ I + P + DH C* +++L+AK++YHHQAQ + *+ Q+ +Q M Q  S  T P T+KMS+Q C    C WI*LEP  +SQ WS     *C*+P *  Q IP  LD S
Subject   3044  HGA*CKIRQSSHSRHKHSLPIVCEWLELRGLDLLGIHSPQKIEYQPLRQDHQC*VKNRLNAKNNYHHQAQRRY*NHQYHNQHMLQSGSLATPPWTRKMSIQFCGPSICRWI*LEPYMLSQKWSLPPFS*C*SPL*IPQKIPEPLDHS  3484

Range 7: 3527 to 3685 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.8 bits(122) 0.0 28/53(53%) 0/53(0%) Minus/Minus
Query      598  CWAYISN*ARLPHAFQVLMQ*L*SCSH*EGHKVENDWTLNTEFHIEAIHSPQT  756
                CWA   N AR  HA  +L Q L*SC+H  G  V +D   + EFHI A HSPQT
Subject   3527  CWACTDNSARQLHASPMLKQWL*SCNHSVGRMVGSDLI*DKEFHIGATHSPQT  3685

Range 8: 3345 to 3683 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.4 bits(252) 0.0 55/113(49%) 0/113(0%) Plus/Plus
Query      416  EGRNKIVCGK*ITS*SSSFKPNYTEATW*KRLCRK*NDCLILC*ASCETDHYNARI*SELEVWGE*MASMWNSVFKVQSFSTLCPS*WLHDYSYCISTWKA*GRRAQLLM*AQ  754
                +G   I CG+*+ S S     N+++    + LCR+*+DCLIL *A CE D  + RI*S+LEVWGE*+A MWNS+  ++S  T+ P+ WLHD+S+C S  +A*  RA+L + AQ
Subject   3345  KGWYSIFCGE*MPSKSKPLSSNHSQTIGRECLCRE*DDCLILH*APCEADSDHTRI*SQLEVWGE*VAPMWNSLS*IKSLPTMRPTEWLHDHSHCFSIGEA*S*RAELSVQAQ  3683

Range 9: 2972 to 3238 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.9 bits(155) 0.0 37/89(42%) 0/89(0%) Plus/Plus
Query       43  KFWPCQEARNSQSLFLKGPFL*KLTTVQKSWDHLKFLRGILTLKR*KIAPYL*YLTGLQSDPQAS*EFTNLHAHFLGQGSCYWTVKLRH  309
                KF  C  AR++ S FLK P+  + T VQ+ WD L++ +G  T ++ + AP+L*    LQ DP A+*  T L+AHF G   C    +L+H
Subject   2972  KF*KCPGARSNPS*FLKVPYQWRQTMVQRFWDLLRYSKGTSTSRKWRKAPFL**HIRLQLDPPAN*GSTKLNAHFPGPRRCC*AARLKH  3238

Range 10: 3284 to 3598 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
86.8 bits(183) 0.0 50/105(48%) 0/105(0%) Plus/Plus
Query      355  VMVTAFGTQLAFFLAQMV*L*RQE*DRLWKVNHQLIQLFQAQLYGSNLVKTLMQKMK*LPYSVLGIM*D*SL*RQNMK*AGSLGRMNGLYVEFCV*SPIIFNLVP  669
                VMV  FG Q  F+ A MV  *R   D LW+VN   +Q  Q Q + +N  +  M +M+*LPY  LG M* *    QNMK  GSLGR++G YVEF V + I  N  P
Subject   3284  VMVIVFGIQSVFYSALMVLP*RLVFDLLWRVNA**VQTSQLQPFTNNWERMFMPRMR*LPYFALGTM*G***SHQNMKSVGSLGRVSGPYVEFFVLNQITSNHAP  3598

Range 11: 2964 to 3281 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.5 bits(141) 0.0 45/106(42%) 0/106(0%) Plus/Plus
Query       35  PVTSSGHAKKQETVNPCS*RGPFFRN*LRSKNLGII*SF*GGF*H*KDRR*LHICDILQGSSQIHRQAKSSQICMLIFWVKGAVIGLSN*GIS*L*N*RLQHFSCA  352
                P  S  +A +QE ++P S*R     + L SK  GI *    G  H ++   LH CD + GSS IHRQ +  Q  MLIF V+G V  L +* + *L* *  Q+  CA
Subject   2964  PT*SFRNAPEQEAIHPSS*RCLISGDRLWSKGSGIF*GIQRGLQHQENGGRLHFCDNI*GSS*IHRQIEGPQN*MLIFRVQGGVARLPD*SMC*L*Y**FQYLLCA  3281

Rupestris stem pitting associated virus strain BS, complete genome

Sequence ID: AY881627.1 Length: 8743 Number of Matches: 11

Range 1: 2956 to 3684 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
523.9 bits(1137) 0.0 210/243(86%) 0/243(0%) Plus/Plus
Query       27  GTGLSQVLAMPRSKKQSILVLEGALSLETDYGPKILGSFEVFKGDFNIKKIEDSSIFVISYRAPVRSTGKLRVHKSACSFSGSRELLLDCQIEASADFEIEDFNTFPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDPALSSPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPS  755
                G  LS+VL MPRSKKQSILVLEGALS+ETDYGPK+LGSF+VFKGDFNIKK+E+ SIFVI+Y+APVRSTGKLRVHK+ CSFSGS+E+LL CQIEA AD++I+DFNTF VPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESE  V P+LS+PTI KQLGEN YAENEMIALFC+RHHVRLI+ITPEYEVSWKFGE+EWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLC+PS
Subject   2956  GPSLSKVLEMPRSKKQSILVLEGALSVETDYGPKVLGSFKVFKGDFNIKKMEEGSIFVITYKAPVRSTGKLRVHKTECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESECLVSPSLSAPTIHKQLGENVYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCKPS  3684

Range 2: 3264 to 3683 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
220.5 bits(475) 0.0 109/140(78%) 0/140(0%) Minus/Minus
Query      335  LGLHK*LSTSTSRLPSADAIAVIMQPLRGAQG*K*LDFKHRIPHRGHSFSPNFQLTSYSGVIMISLT*CLTQNKXXXXXXXXXXSPSCFRIVGLERAGSTGDSLSTNDLIPAFKARPSVLRRKPTECQKQLPSPGTGKVL  754
                LGLH+* STSTSRLP+A+A+AVIMQP  GA G K* D + RIPHRGHS SPNFQLTSYSGVI ISLT CL QNKAIISFSA* FSPSC  +VG ER G T  SLST D IPAFKARPSVL +KPTECQKQLPSPGT KVL
Subject   3264  LGLHR*FSTSTSRLPNAEAMAVIMQPFSGAHGWK*FDLRQRIPHRGHSLSPNFQLTSYSGVITISLTWCLMQNKAIISFSA*TFSPSCL*MVGAERLGLTRHSLSTKDRIPAFKARPSVLSKKPTECQKQLPSPGTEKVL  3683

Range 3: 2955 to 3218 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
143.1 bits(306) 0.0 63/88(72%) 0/88(0%) Minus/Minus
Query       26  NNSSLDPENEHADL*TLSLPVDLTGAL*DITNMELSSIFLMLKSPLKTSNDPKIFGP*SVSKERAPSRTRIDCFLLLGMARTCDRPVP  289
                +N+SLDPENEH+ L*TL+LPVDLTGAL  IT ME SSIFLMLKSPL T  DP+ FGP*SVS ++APSRTR+DCFLL G+++T DR  P
Subject   2955  SNTSLDPENEHSVL*TLNLPVDLTGALYVITKMEPSSIFLMLKSPLNTLKDPRTFGP*SVSTDKAPSRTRMDCFLLRGISKTLDRLGP  3218

Range 4: 3331 to 3684 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.9 bits(264) 0.0 56/118(47%) 0/118(0%) Minus/Minus
Query      402  AGPT*VIEHVYLTPSKC*CNSCNHAAIKRGTRLKMIGL*TQNST*RPFILPKLPAHFIFWRYNDQSHMMPNTE*GNHFIFCISVFTKLLPYSWA*KSWINW*FTFHKRSYSCLQS*TI  755
                AG   +I+HV  TP +C* N C+HA I+ G  L++I   T+NST* P  LPKLP  FIFW  + Q HM+PN +*GNH I  I++ ++L    W+*++W    FT HKRS + L   TI
Subject   3331  AGLAQIIQHVNFTPPQC*SNGCDHATIQWGAWLEVI*FKTKNST*GPLTLPKLPTDFIFWCDHYQPHMVPNAK*GNHLILGINILSQLFVNGWS*EAWTY*AFTLHKRSNTSL*GKTI  3684

Range 5: 2983 to 3291 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.0 bits(190) 0.0 46/103(45%) 0/103(0%) Minus/Minus
Query       54  TITRHRKSVEVFNFKVS*CLNLTVQ*QLP*PRK*ACRFVNS*LACGSDWSPVRYHKYGAIFYLFNVKIPLKNFK*SQDFWTVVSF*RKGPFKNKD*LFLASWH  362
                TITRHR+ +EV N  +S C NL     L  P K*A  FVN   A G + S + YHK GA  +  +V++P +  K SQ+ WT+V     G FKN D L LA  H
Subject   2983  TITRHREGIEVINIIISTCFNLAA*QHLLGPGK*AFSFVNPQFAGGPNRSLICYHKNGAFLHFLDVEVPFEYLKRSQNLWTIVCLH**GTFKN*DGLLLAPGH  3291

Range 6: 3345 to 3683 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
121.1 bits(258) 0.0 56/113(50%) 0/113(0%) Plus/Plus
Query      416  EGRNKIVCGK*ITS*SSSFKPNYTEATW*KRLCRK*NDCLILC*ASCETDHYNARI*SELEVWGE*MASMWNSVFKVQSFSTLCPS*WLHDYSYCISTWKA*GRRAQLLM*AQ  754
                +G   I CG+*+ S S     N+++ T  + LCR+*+DCLIL *A CE D  + RI*S+LEVWGE*+A MWNS+  ++S  T+ P+ WLHD+S+C S  +A*  RA+L + AQ
Subject   3345  KGWYSIFCGE*MPSKSKPLSSNHSQTTGRECLCRE*DDCLILH*APCEADSDHTRI*SQLEVWGE*VAPMWNSLS*IKSLPTMRPTEWLHDHSHCFSIGEA*S*RAELSVQAQ  3683

Range 7: 2972 to 3238 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.5 bits(152) 0.0 36/89(40%) 0/89(0%) Plus/Plus
Query       43  KFWPCQEARNSQSLFLKGPFL*KLTTVQKSWDHLKFLRGILTLKR*KIAPYL*YLTGLQSDPQAS*EFTNLHAHFLGQGSCYWTVKLRH  309
                KF  C  AR++ S FLK P+  + T VQ+ WD L++ +G  T ++ + AP+L*    L+  P A+* FT L+AHF G   C    +L+H
Subject   2972  KF*KCPGARSNPS*FLKVPYQWRQTMVQRFWDLLRYSKGTSTSRKWRKAPFL**HIRLRLGPPAN*GFTKLNAHFPGPRRCC*AARLKH  3238

Range 8: 3044 to 3484 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
129.8 bits(277) 0.0 70/147(48%) 0/147(0%) Minus/Minus
Query      115  HDA*HRIRQSFHFLHKRFHQVASV*LGLKELDQLVIHFPQTILFLPSKLDHLC*EESQLSAKSSYHHQAQEKC*SLQFQSQLMPQFDSPITAPLTQKMSMQICELLACLWI*LEPCKISQIWSYLLSF*C*NPP*KLQMIPRFLDRS  555
                H A* +IRQS H  HK    V    L L+ LD L IH PQ I + P + DH C* +++L+AK++YHHQAQ + *S Q+ +Q M Q  S  T P T+KMS+Q CE   C W * EP  +SQ WS     *C*+P *    IP  LD S
Subject   3044  HGA*CKIRQSSHSRHKHSLPVVCEWLELRGLDLLGIHSPQKIEYQPLRQDHQC*VKNRLNAKNNYHHQAQRRY*SHQYHNQHMLQSGSLATPPWTRKMSIQFCEPSICRWT*PEPYMLSQKWSLPPFS*C*SPL*IP*KIPEPLDHS  3484

Range 9: 3527 to 3685 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.8 bits(122) 0.0 28/53(53%) 0/53(0%) Minus/Minus
Query      598  CWAYISN*ARLPHAFQVLMQ*L*SCSH*EGHKVENDWTLNTEFHIEAIHSPQT  756
                CWA   N AR  HA  +L Q L*SC+H  G  V +D   + EFHI A HSPQT
Subject   3527  CWACTDNSARQLHASPMLKQWL*SCNHSVGRMVGSDLI*DKEFHIGATHSPQT  3685

Range 10: 3284 to 3598 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
86.8 bits(183) 0.0 50/105(48%) 0/105(0%) Plus/Plus
Query      355  VMVTAFGTQLAFFLAQMV*L*RQE*DRLWKVNHQLIQLFQAQLYGSNLVKTLMQKMK*LPYSVLGIM*D*SL*RQNMK*AGSLGRMNGLYVEFCV*SPIIFNLVP  669
                VMV  FG Q  F+ A MV  *R   D LW+VN   +Q  Q Q + +N  +  M +M+*LPY  LG M* *    QNMK  GSLGR++G YVEF V + I  N  P
Subject   3284  VMVIVFGIQSVFYSALMVLP*RLVFDLLWRVNA**VQASQLQPFTNNWERMFMPRMR*LPYFALGTM*G***SHQNMKSVGSLGRVSGPYVEFFVLNQITSNHAP  3598

Range 11: 2964 to 3281 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.7 bits(148) 0.0 45/106(42%) 0/106(0%) Plus/Plus
Query       35  PVTSSGHAKKQETVNPCS*RGPFFRN*LRSKNLGII*SF*GGF*H*KDRR*LHICDILQGSSQIHRQAKSSQICMLIFWVKGAVIGLSN*GIS*L*N*RLQHFSCA  352
                P+ S  +A +QE ++P S*R     + L SK  GI *    G  H ++   LH CD + GS  +HRQ + SQ  MLIF V+G V  L +* + *L* * LQ+  CA
Subject   2964  PI*SFRNAPEQEAIHPSS*RCLISGDRLWSKGSGIF*GIQRGLQHQENGGRLHFCDNI*GSG*VHRQIEGSQN*MLIFRVQGGVARLPD*SMC*L*Y**LQYLLCA  3281

Grapevine rupestris stem pitting associated virus isolate TEMP BR replicase, 24.4 kDa protein, 12.8 kDa protein, 8.4 kDa protein, and 28 kDa protein genes, complete cds

Sequence ID: KX925556.1 Length: 8700 Number of Matches: 11

Range 1: 2945 to 3673 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
522.5 bits(1134) 0.0 210/243(86%) 0/243(0%) Plus/Plus
Query       27  GTGLSQVLAMPRSKKQSILVLEGALSLETDYGPKILGSFEVFKGDFNIKKIEDSSIFVISYRAPVRSTGKLRVHKSACSFSGSRELLLDCQIEASADFEIEDFNTFPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDPALSSPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPS  755
                G GLS+VL MPRSKKQSILVLEGALS+ETD+GPK+LGSFEVFKGDFNIKK+E+ SIFVISY+APVRSTGKLRVHKS CSFSGS+E+LL CQIEA AD++I+DFNTF VPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESE  V   LS+PT+ KQL ENAYAENEMIALFC+RHHVRLI++TPEYEVSWKFGE+EWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVD+LNYLCRPS
Subject   2945  GPGLSKVLEMPRSKKQSILVLEGALSIETDFGPKVLGSFEVFKGDFNIKKMEEGSIFVISYKAPVRSTGKLRVHKSECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESERLVSSDLSAPTVSKQLEENAYAENEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDILNYLCRPS  3673

Range 2: 3253 to 3672 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
203.1 bits(437) 0.0 102/140(73%) 0/140(0%) Minus/Minus
Query      335  LGLHK*LSTSTSRLPSADAIAVIMQPLRGAQG*K*LDFKHRIPHRGHSFSPNFQLTSYSGVIMISLT*CLTQNKXXXXXXXXXXSPSCFRIVGLERAGSTGDSLSTNDLIPAFKARPSVLRRKPTECQKQLPSPGTGKVL  754
                LGLH+*   STSRLPSA+A+AVIMQP  GA G K*LDF+ RIPHRGHS SPNFQLTSYSGV  ISLT C  QN AIISFSA*AFS +C   VG ER+  T  SLST D +PAF+A+PSVL +KPTECQKQLPSPGT KVL
Subject   3253  LGLHR*FKISTSRLPSAEAMAVIMQPFSGAHGWK*LDFRQRIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQNNAIISFSA*AFSSNCLETVGAERSELTRRSLSTKDRMPAFRAKPSVLSKKPTECQKQLPSPGTEKVL  3672

Range 3: 2944 to 3207 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
156.4 bits(335) 0.0 67/88(76%) 0/88(0%) Minus/Minus
Query       26  NNSSLDPENEHADL*TLSLPVDLTGAL*DITNMELSSIFLMLKSPLKTSNDPKIFGP*SVSKERAPSRTRIDCFLLLGMARTCDRPVP  289
                +N+SLDPENEH+DL*TL+LPVDLTGAL DIT ME SSIFLMLKSPLKTS DP+  GP SVS +RAPSRT+IDCFLL G+++T DRP P
Subject   2944  SNTSLDPENEHSDL*TLNLPVDLTGALYDITKMEPSSIFLMLKSPLKTSKDPRTLGPKSVSIDRAPSRTKIDCFLLRGISKTLDRPGP  3207

Range 4: 3320 to 3673 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.4 bits(239) 0.0 56/118(47%) 0/118(0%) Minus/Minus
Query      402  AGPT*VIEHVYLTPSKC*CNSCNHAAIKRGTRLKMIGL*TQNST*RPFILPKLPAHFIFWRYNDQSHMMPNTE*GNHFIFCISVFTKLLPYSWA*KSWINW*FTFHKRSYSCLQS*TI  755
                A  T +I ++  TP K * N  +HA I+ G  L++IGL  +NST* P   PK P +FIFW Y  QS+M+P+TE  NH I  IS+F +L    W+*K   N   T HKRS + LQS*T+
Subject   3320  ARSTQII*NINFTPPKR*GNGRDHATIQWGAWLEVIGLQAKNST*GPLTFPKFPTNFIFWCYYYQSYMVPDTEQCNHLILSISIFFQLFRNGWS*KI*TN*ALTLHKRSNASLQS*TV  3673

Range 5: 2972 to 3277 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
103.7 bits(220) 0.0 50/102(49%) 0/102(0%) Minus/Minus
Query       54  ITRHRKSVEVFNFKVS*CLNLTVQ*QLP*PRK*ACRFVNS*LACGSDWSPVRYHKYGAIFYLFNVKIPLKNFK*SQDFWTVVSF*RKGPFKNKD*LFLASWH  359
                +TR+R+S+++ N  +S CL L     L  P K*A  FVN *   GS+W  V YHK GA+ + F+V++PL+NFK  Q+F T V F R G  KN+D*LF AS H
Subject   2972  VTRYRESIKIINIIISTCLYLAT*QYLLGPGK*AL*FVNP*FTGGSNWGLV*YHKNGALLHFFDVEVPLENFKGPQNFRTKVCFDR*GTLKNQD*LFFASGH  3277

Range 6: 3334 to 3639 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
113.8 bits(242) 0.0 51/102(50%) 0/102(0%) Plus/Plus
Query      416  EGRNKIVCGK*ITS*SSSFKPNYTEATW*KRLCRK*NDCLILC*ASCETDHYNARI*SELEVWGE*MASMWNSVFKVQSFSTLCPS*WLHDYSYCISTWKA*  721
                EG + I CG+*  S*  SF  N       K LC +*+DC++L  A C+TD  N RI*S LE+WG+*+A MWNS+ +VQS  T+ P+ WLHD+ +C+S W+A*
Subject   3334  EGWHSIFCGE*APS*FRSFSSNRF*TIGRKCLC*E*DDCIVLYPAPCKTDSSNTRI*S*LEIWGK*VAPMWNSLPEVQSLPTMRPTEWLHDHGHCLSAWEA*  3639

Range 7: 2971 to 3267 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
85.4 bits(180) 0.0 49/99(49%) 0/99(0%) Plus/Plus
Query       53  HAKKQETVNPCS*RGPFFRN*LRSKNLGII*SF*GGF*H*KDRR*LHICDILQGSSQIHRQAKSSQICMLIFWVKGAVIGLSN*GIS*L*N*RLQHFSC  349
                +A KQ+TVN  S*  P +RN L S + G++*SF GG  H K+   LH CDI+QG S IHR  K SQI +LIF V+G +  L + G+ *L* *   +F C
Subject   2971  NAPKQKTVNLGS*GCPIYRNRLWS*SSGVL*SFQGGLQHQKNGGGLHFCDIIQGPS*IHR*IKGSQIRVLIFRVQGGIARLPDRGMC*L*Y**F*YFLC  3267

Range 8: 2961 to 3473 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
140.8 bits(301) 0.0 80/171(47%) 0/171(0%) Minus/Minus
Query       43  HDA*HRIRQSFHFLHKRFHQVASV*LGLKELDQLVIHFPQTILFLPSKLDHLC*EESQLSAKSSYHHQAQEKC*SLQFQSQLMPQFDSPITAPLTQKMSMQICELLACLWI*LEPCKISQIWSYLLSF*C*NPP*KLQMIPRFLDRSQFLKKGPLQEQGLTVSCFLAWPEL  555
                H A +R  QS H  HK F  +    L LK+L+ L  H PQ I   PS+L+   *  +QL+AKS+  HQ Q K *+ Q+ +Q MP   +    P T+KMS  ICE L   WI*L PC ISQ WS    F*C*+PP*KLQ  P   D+S F   G  QE  LTV CF A+ +L
Subject   2961  HGAGYRTMQSSHSQHKHFLPIV*KRLELKDLN*LGAHSPQKIECQPSELNRQY*VRNQLNAKSNCRHQVQRKY*NHQYHNQHMPLSGNLAIPPWTRKMSTLICEPLIYRWI*LGPCMISQKWSPPPFF*C*SPP*KLQRTPEL*DQSLFR*IGHPQEPRLTVFCFGAFLKL  3473

Range 9: 3519 to 3674 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.9 bits(107) 0.0 25/52(48%) 0/52(0%) Minus/Minus
Query      601  CWAYISN*ARLPHAFQVLMQ*L*SCSH*EGHKVENDWTLNTEFHIEAIHSPQ  756
                C  Y  N     HA Q L Q  *SC+H  G  V +DWT   EFHI A H PQ
Subject   3519  C*VYTDNLKYQLHASQALRQWP*SCNHSVGRMVGSDWTSGKEFHIGATHFPQ  3674

Range 10: 3273 to 3587 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
94.5 bits(200) 0.0 53/105(50%) 0/105(0%) Plus/Plus
Query      355  VMVTAFGTQLAFFLAQMV*L*RQE*DRLWKVNHQLIQLFQAQLYGSNLVKTLMQKMK*LPYSVLGIM*D*SL*RQNMK*AGSLGRMNGLYVEFCV*SPIIFNLVP  669
                V   AFG QL  +    V*L*R   D LW+V+  L+Q+FQ Q + +N  K LM +M+*L  SV G M*D*  * QNMK  G+LG+++G YVEF  *SPI  N  P
Subject   3273  VTAIAFGIQLVSYSVLTV*L*RLAFDLLWRVSA*LVQIFQLQPFLNNWKKMLMLRMR*LHCSVSGTM*D****HQNMKLVGNLGKVSGPYVEFFA*SPITSNHAP  3587

Range 11: 2961 to 3191 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
85.4 bits(180) 0.0 42/77(55%) 0/77(0%) Plus/Plus
Query       43  KFWPCQEARNSQSLFLKGPFL*KLTTVQKSWDHLKFLRGILTLKR*KIAPYL*YLTGLQSDPQAS*EFTNLHAHFLG  273
                KF  C EA+NSQS FL+ P+L K T V K W  LKF RG  T K+ + AP+L*Y T  Q DP  +* FTN  AHF G
Subject   2961  KF*KCPEAKNSQSWFLRVPYLSKQTLVLKFWGPLKFSRGTSTSKKWRRAPFL*YHTRPQLDPPVN*GFTNQSAHFPG  3191

Nucleotide Sequence (159 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 33 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
16
32
48
64
80
96
112
128
144
159

Descriptions

Alignments

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OB1

Sequence ID: AB277783.1 Length: 2876 Number of Matches: 5

Range 1: 830 to 985 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
111.0 bits(236) 0.0 47/52(90%) 0/52(0%) Plus/Plus
Query        2  IMNNLVKALSTFEFVGVYSELRFPVVVHSVPGSGKRSLIRELITEDESFTAF  157
                IMNNLVKALSTFEFVG+YS LRFPVVVHSVPGSGK SLIREL+TEDESF AF
Subject    830  IMNNLVKALSTFEFVGIYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAF  985

Range 2: 830 to 985 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
94.5 bits(200) 0.0 39/52(75%) 0/52(0%) Minus/Minus
Query        2  EGCETLVLSDELSYQTSFTATRNTMNDNWKSELTIDTHKLKRRQSFN*VIHN  157
                +G ETLVLSD+ SY T+FT TRN +N+NWKSE  I+THKLKRRQSFN*VIHN
Subject    830  KGYETLVLSDKFSY*TAFTTTRNAVNNNWKSEHAINTHKLKRRQSFN*VIHN  985

Range 3: 831 to 986 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.5 bits(176) 0.0 41/52(79%) 0/52(0%) Minus/Minus
Query        3  *RL*NSRPQ**ALLSNFFYRYQEHYERQLEI*AHYRHPQTQT*TKL*LSYS*  158
                *RL*NSRPQ*  LL N FY YQE  E+QLEI*A Y++PQTQT*TKL*LSYS*
Subject    831  *RL*NSRPQ*QVLLLNCFYHYQERCEQQLEI*ARYKYPQTQT*TKL*LSYS*  986

Range 4: 829 to 987 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.0 bits(142) 0.0 42/53(79%) 0/53(0%) Plus/Plus
Query        1  YYE*LS*SFVYV*VCGCL**AQIXXXXXXXXXXX*KKFDKRAHH*GREFHSLH  159
                YYE*LS*SFVYV*VCG L* AQISSC S  SW* *K+F+KR  H*GREFHSL+
Subject    829  YYE*LS*SFVYV*VCGYL*RAQISSCCSQRSW*W*KQFNKRTCH*GREFHSLY  987

Range 5: 867 to 983 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.9 bits(96) 0.0 28/39(72%) 0/39(0%) Plus/Plus
Query       39  SLWVSIVSSDFQLSFIVFLVAVKEVXXXXXXLRTRVSQP  155
                SLWV I  SDFQL F  FLV VK V**E+ SLRTRVS P
Subject    867  SLWVFIACSDFQLLFTAFLVVVKAV**ENLSLRTRVS*P  983

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 6

Range 1: 6574 to 6729 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.0 bits(238) 0.0 49/52(94%) 0/52(0%) Plus/Plus
Query        2  IMNNLVKALSTFEFVGVYSELRFPVVVHSVPGSGKRSLIRELITEDESFTAF  157
                IMNNLVKALSTFEFVGVYS LRFPVVVHSVPGSGK SLIRELITEDESF AF
Subject   6574  IMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAF  6729

Range 2: 6574 to 6729 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
99.1 bits(210) 0.0 41/52(79%) 0/52(0%) Minus/Minus
Query        2  EGCETLVLSDELSYQTSFTATRNTMNDNWKSELTIDTHKLKRRQSFN*VIHN  157
                E  ETLV S+ELSYQT+FT TRN MN+NWKSE  I+THKLKRRQSFN*VIHN
Subject   6574  ESYETLVFSNELSYQTTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHN  6729

Range 3: 6575 to 6730 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
93.6 bits(198) 0.0 44/52(85%) 0/52(0%) Minus/Minus
Query        3  *RL*NSRPQ**ALLSNFFYRYQEHYERQLEI*AHYRHPQTQT*TKL*LSYS*  158
                *+L*NSR Q**ALLSN+FY YQE YE+QLEI*A Y+HPQTQT*TKL*LSYS*
Subject   6575  *KL*NSRLQ**ALLSNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS*  6730

Range 4: 6573 to 6641 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.3 bits(97) 0.0 22/23(96%) 0/23(0%) Plus/Plus
Query        1  YYE*LS*SFVYV*VCGCL**AQI  69
                YYE*LS*SFVYV*VCGCL* AQI
Subject   6573  YYE*LS*SFVYV*VCGCL*RAQI  6641

Range 5: 6675 to 6731 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.3 bits(73) 0.0 15/19(79%) 0/19(0%) Plus/Plus
Query      103  *KKFDKRAHH*GREFHSLH  159
                *K FDKRAH+* REFHS H
Subject   6675  *K*FDKRAHY*RREFHSFH  6731

Range 6: 6611 to 6721 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.0 bits(94) 0.0 28/37(76%) 0/37(0%) Plus/Plus
Query       39  SLWVSIVSSDFQLSFIVFLVAVKEVXXXXXXLRTRVS  149
                SLWV I  SDFQL FI FLV VK V**ESS L+TRVS
Subject   6611  SLWVFIACSDFQLLFIAFLVVVKVV**ESSLLKTRVS  6721

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 6

Range 1: 6574 to 6729 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
110.1 bits(234) 0.0 47/52(90%) 0/52(0%) Plus/Plus
Query        2  IMNNLVKALSTFEFVGVYSELRFPVVVHSVPGSGKRSLIRELITEDESFTAF  157
                IMNNLVKALSTFEFVGVYS LRFPVVVHSVPGSGK SLIREL+TEDE+F AF
Subject   6574  IMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELVTEDENFIAF  6729

Range 2: 6574 to 6729 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
93.6 bits(198) 0.0 39/52(75%) 0/52(0%) Minus/Minus
Query        2  EGCETLVLSDELSYQTSFTATRNTMNDNWKSELTIDTHKLKRRQSFN*VIHN  157
                +G E LVLSD+ SY T+FT TRN MN+NWKSE  I+THKLKRRQSFN*VIHN
Subject   6574  KGYEILVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHN  6729

Range 3: 6575 to 6730 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.7 bits(196) 0.0 43/52(83%) 0/52(0%) Minus/Minus
Query        3  *RL*NSRPQ**ALLSNFFYRYQEHYERQLEI*AHYRHPQTQT*TKL*LSYS*  158
                *RL*NSRPQ*  LL N+FY YQE YE+QLEI*A Y+HPQTQT*TKL*LSYS*
Subject   6575  *RL*NSRPQ*QVLLLNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS*  6730

Range 4: 6573 to 6641 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.3 bits(97) 0.0 22/23(96%) 0/23(0%) Plus/Plus
Query        1  YYE*LS*SFVYV*VCGCL**AQI  69
                YYE*LS*SFVYV*VCGCL* AQI
Subject   6573  YYE*LS*SFVYV*VCGCL*RAQI  6641

Range 5: 6675 to 6731 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
32.7 bits(65) 0.0 14/19(74%) 0/19(0%) Plus/Plus
Query      103  *KKFDKRAHH*GREFHSLH  159
                *K F+KR  H*GREFHSL+
Subject   6675  *K*FNKRTCH*GREFHSLY  6731

Range 6: 6611 to 6727 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.3 bits(99) 0.0 28/39(72%) 0/39(0%) Plus/Plus
Query       39  SLWVSIVSSDFQLSFIVFLVAVKEVXXXXXXLRTRVSQP  155
                SLWV I  SDFQL FI FLV VK V**E+ SLRTR+S P
Subject   6611  SLWVFIACSDFQLLFIAFLVVVKVV**ENLSLRTRIS*P  6727

Rupestris stem pitting associated virus strain SG1, complete genome

Sequence ID: AY881626.1 Length: 8742 Number of Matches: 2

Range 1: 6574 to 6729 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.5 bits(226) 0.0 44/52(85%) 0/52(0%) Plus/Plus
Query        2  IMNNLVKALSTFEFVGVYSELRFPVVVHSVPGSGKRSLIRELITEDESFTAF  157
                IMNNLVKALSTFEF+GV+S L+FPVV+HSVPGSGK SLIRELI+EDESF AF
Subject   6574  IMNNLVKALSTFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAF  6729

Range 2: 6574 to 6729 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.8 bits(111) 0.0 26/52(50%) 0/52(0%) Minus/Minus
Query        2  EGCETLVLSDELSYQTSFTATRNTMNDNWKSELTIDTHKLKRRQSFN*VIHN  157
                E  ETLVL D L Y T+ T  R TM ++WK + T +T+KL+  Q FN +IHN
Subject   6574  ESHETLVL*D*LPY*TTLTTARYTMYNDWKFKHTENTYKLEG*QCFNQIIHN  6729

Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome

Sequence ID: JX559646.1 Length: 8726 Number of Matches: 2

Range 1: 6574 to 6729 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.5 bits(226) 0.0 44/52(85%) 0/52(0%) Plus/Plus
Query        2  IMNNLVKALSTFEFVGVYSELRFPVVVHSVPGSGKRSLIRELITEDESFTAF  157
                IMNNLVKALSTFEF+GV+S L+FPVV+HSVPGSGK SLIRELI+EDESF AF
Subject   6574  IMNNLVKALSTFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAF  6729

Range 2: 6574 to 6729 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.9 bits(107) 0.0 25/52(48%) 0/52(0%) Minus/Minus
Query        2  EGCETLVLSDELSYQTSFTATRNTMNDNWKSELTIDTHKLKRRQSFN*VIHN  157
                E  ETLVL D L Y T+ T  R TM ++WK + T +T+K +  Q FN +IHN
Subject   6574  ESHETLVL*D*LPY*TTLTTARYTMYNDWKFKHTENTYKFEG*QCFNQIIHN  6729

Nucleotide Sequence (955 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 33 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
96
192
288
384
480
576
672
768
864
955

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate SK30, complete genome

Sequence ID: KX274277.1 Length: 8724 Number of Matches: 7

Range 1: 3064 to 4014 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
766.3 bits(1666) 0.0 314/317(99%) 0/317(0%) Minus/Plus
Query        3  GSFEVFKGDFNIKKMEEGSIFVITYKAPVRSTGKLRVHKTECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLGTDGLALKAGIRSFVESECLVSPNLSAPTIHKQLGENVYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCKPSTYHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGSGPQSIKVDELRKVKRSALDFLSMNGSKITYFPNFERAEKLQGSL  953
                GSFEVFKGDFNIKKMEEGSIFVITYKAPVRSTGKLRVHKTECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLL TDGLALKAGIRSFVESECLVSPNLSAPTIHKQLGENVYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCKPST HIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGSGPQSIKVDELRKVKRSALDFLSMNGSKITYFPNFERAEKLQG L
Subject   3064  GSFEVFKGDFNIKKMEEGSIFVITYKAPVRSTGKLRVHKTECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESECLVSPNLSAPTIHKQLGENVYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCKPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGSGPQSIKVDELRKVKRSALDFLSMNGSKITYFPNFERAEKLQGCL  4014

Range 2: 3119 to 4015 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
688.8 bits(1497) 0.0 282/299(94%) 0/299(0%) Plus/Minus
Query        2  ANSLAIFQPAQSLGSRLSWTHSLTENQERIA*PSATHPLLCSEGHFQSSQHALCVH*LCQIRQKSCH*G*SPQFHHLCHTWRKCQKLQRLQPSTSY*GRLLGTTPQKCDRCWACTGNSARQLHASPMLKQWL*SCNHSVGRMVGSDLI*DKEFHIGATHSPQTSN*LHILV*SLSASHGA*CKIRQSSHSRHKHSLPIVCEWLELRGLDLLGIHFPQKI*YQPLRQDHQCRAKNQLNAKNNYHHQAQRRY*SHQYHNQHMLQSGSLATPPWTRKMSIQFCEPSICQLT*LEPYMLSQKW  898
                AN LAIFQPAQSLGSRLSWTHSLTENQERIA*PSA HPLLCSE HFQ SQHALCVH*LCQIRQKSCH*G*SPQFHHLCHTWRKCQKLQRLQPSTSY*GRLLGTTP+KCD CWACT NSARQLHASPMLKQWL*SCNHSVGRMVGSDLI*DKEFHIGATHSPQTSN*LHILV*SLSASHGA*CKIRQSSHSRHKHSLPIVCEWLELRGLDLLGIH PQKI YQPLRQDHQC  KN+LNAKNNYHHQAQRRY*+HQYHNQHMLQSGSLATPPWTRKMSIQFC PSIC+  *LEPYMLSQKW
Subject   3119  ANILAIFQPAQSLGSRLSWTHSLTENQERIA*PSAIHPLLCSEDHFQFSQHALCVH*LCQIRQKSCH*G*SPQFHHLCHTWRKCQKLQRLQPSTSY*GRLLGTTPRKCDWCWACTDNSARQLHASPMLKQWL*SCNHSVGRMVGSDLI*DKEFHIGATHSPQTSN*LHILV*SLSASHGA*CKIRQSSHSRHKHSLPIVCEWLELRGLDLLGIHSPQKIEYQPLRQDHQC*VKNRLNAKNNYHHQAQRRY*NHQYHNQHMLQSGSLATPPWTRKMSIQFCGPSICRWI*LEPYMLSQKW  4015

Range 3: 3064 to 4014 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
688.8 bits(1497) 0.0 302/317(95%) 0/317(0%) Plus/Minus
Query        3  QTPLQFFSPLKVWEVGYLGPIH*QKIKSGSLDLPQLIHFYALRATSNLLNMPYVFISYVK*GRNLAIRVNHLNFTIYVTLGANVKSFKGFSQVHHIKAASLAQLLKNVIGAGLAQVIQHVNFTPPQC*SNGCDHATIQWGAWLEVI*FKTKNSXXXXXXXXXXXXDFIFWCDHYQPHMVPNAK*GNHLILGINILSQLFVNGWS*EVWTY*AFTFHKRSNTSL*GKTISAEQKTN*MPKTITITRHREGIEVINIIISTCFNLAA*QHLLGPGK*AFSFVNPQFAS*PNWSLICYHKNGAFLHFLDVEVPFEYLKRS  953
                QT LQFFSPLKVWEVGYLGPIH*QKIKSGSLDLPQ IHFYALR TSN LNMPYVFISYVK*GRNLAIRVNHLNFTIYVTLGANVKSFKGFSQVHHI+AASLAQLL+NVIGAGLAQ+IQHVNFTPPQC*SNGCDHATIQWGAWLEVI*FKTKNST*GPLTLPKLPTDFIFWCDHYQPHMVPNAK*GNHLILGINILSQLFVNGWS*EVWTY*AFT HKRSNTSL*GKTISAE KT+*MPKTITITRHREGIE+INIIISTCFNLAA*QHLLGPGK*AFSFV+PQFA   NWSLICYHKNGAFLHFLDVEVPFEYLKRS
Subject   3064  QTSLQFFSPLKVWEVGYLGPIH*QKIKSGSLDLPQFIHFYALRTTSNFLNMPYVFISYVK*GRNLAIRVNHLNFTIYVTLGANVKSFKGFSQVHHIEAASLAQLLENVIGAGLAQIIQHVNFTPPQC*SNGCDHATIQWGAWLEVI*FKTKNST*GPLTLPKLPTDFIFWCDHYQPHMVPNAK*GNHLILGINILSQLFVNGWS*EVWTY*AFTLHKRSNTSL*GKTISAE*KTD*MPKTITITRHREGIEIINIIISTCFNLAA*QHLLGPGK*AFSFVDPQFAGGSNWSLICYHKNGAFLHFLDVEVPFEYLKRS  4014

Range 4: 3062 to 4015 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
685.6 bits(1490) 0.0 302/318(95%) 0/318(0%) Minus/Plus
Query        2  WDLLRYSKGTSTSRKWRKAPFL**HIRLQLGQLAN*GFTKLNAHFPGPRRCC*AARLKHVLIMILMTSIPSLCLVMVIVFGIQLVFCSALMVLP*RLVLDLLWKVNA**VQTSQLQPFTNNWERMFMPRMR*LPYFALGTM*G***SHQNMKSVGSLGRVSGPYVEFFVLNQITSNHAPH*MVA*SQPLLQHWGGVKLTC*ITCASPAPITFLRSCAKEAALI*CTWLKPLKLLTFAPSVT*MVKLR*LTLMARFLPYLT*LMNT*GMLRRLEVALRA*KWMSCGRSSDPLLIFCQ*MGPR*PTSQTLSGLKNCKGVC  955
                WDLLRYSKGTSTSRKWRKAPFL**HIRLQL   AN*G TKLNAHFPGPRRCC*AARLKHVLIMILM SIPSLCLVMVIVFGIQ VF SALMVLP*RLV DLLW+VNA**VQTSQLQPFTNNWERMFMPRMR*LPYFALGTM*G***SHQNMKSVGSLGRVSGPYVEFFVLNQITSNHAPH*MVA*SQPLLQHWGGVKLTC*I CASPAPITF RSCAKEAA I*CTWLKPLKLLTFAPSVT*MVKLR*LTLMARFLPYLT*LMNT*GMLR+LEV LRA*KWM+CGRSSDPLLIFCQ*MGPR*PTSQTLSGLKNCK VC
Subject   3062  WDLLRYSKGTSTSRKWRKAPFL**HIRLQLDPPAN*GSTKLNAHFPGPRRCC*AARLKHVLIMILMISIPSLCLVMVIVFGIQSVFYSALMVLP*RLVFDLLWRVNA**VQTSQLQPFTNNWERMFMPRMR*LPYFALGTM*G***SHQNMKSVGSLGRVSGPYVEFFVLNQITSNHAPH*MVA*SQPLLQHWGGVKLTC*IICASPAPITFSRSCAKEAASI*CTWLKPLKLLTFAPSVT*MVKLR*LTLMARFLPYLT*LMNT*GMLRKLEVVLRA*KWMNCGRSSDPLLIFCQ*MGPR*PTSQTLSGLKNCKDVC  4015

Range 5: 3063 to 4016 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
672.3 bits(1461) 0.0 313/318(98%) 0/318(0%) Plus/Minus
Query        1  SKLPCNFSARSKFGK*VILDPFIDRKSRADRLTFRNSSTFML*GPLPIFSTCLMCSLVMSNKAEILPLGLITSISPFMSHLAQMXXXXXXXXXYIILRPPPWHNSSKM**VLGLHR*FSTSTSRLPNAEAMAVIMQPFSGAHGWK*FDLRQRIPHRGHSLSPNFQLTSYSGVITISLTWCLMQNKAIISFSA*TFSPNCL*MVGAERFGLTRHSLSTKDLIPAFKARPSVPSKKPTECQKQLPSPGTEKVLKXXXXXXXXXXXWQPSNTSLDPENEHSVL*TLNLPVDLTGALYVITKMEPSSIFLMLKSPLNTSKDP  954
                SK PCNFSARSKFGK*VILDPFIDRKSRADRLTFRNSSTFML*GPLPIFSTCLMCSLVMSNKAEILPLGLITSISPFMSHLAQMSKASKASAKYIILRPPPWHNSSKM* VLGLHR*FSTSTSRLPNAEAMAVIMQPFSGAHGWK*FDLRQRIPHRGHSLSPNFQLTSYSGVITISLTWCLMQNKAIISFSA*TFSPNCL*MVGAERFGLTRHSLSTKD IPAFKARPSV SKKPTECQKQLPSPGTEKVLKSSIS*SAHASIWQPSNTSLDPENEHSVL TLNLPVDLTGALYVITKMEPSSIFLMLKSPLNTSKDP
Subject   3063  SKHPCNFSARSKFGK*VILDPFIDRKSRADRLTFRNSSTFML*GPLPIFSTCLMCSLVMSNKAEILPLGLITSISPFMSHLAQMSKASKASAKYIILRPPPWHNSSKM*LVLGLHR*FSTSTSRLPNAEAMAVIMQPFSGAHGWK*FDLRQRIPHRGHSLSPNFQLTSYSGVITISLTWCLMQNKAIISFSA*TFSPNCL*MVGAERFGLTRHSLSTKDRIPAFKARPSVLSKKPTECQKQLPSPGTEKVLKSSIS*SAHASIWQPSNTSLDPENEHSVLWTLNLPVDLTGALYVITKMEPSSIFLMLKSPLNTSKDP  4016

Range 6: 3324 to 4016 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
483.6 bits(1049) 0.0 220/231(95%) 0/231(0%) Minus/Plus
Query        1  RH*WSCLKGWY*IFCGXXXXXXXXXXXSNHSQTIGRECLCRE*DDCLILH*APCEADSDHTRI*SQLEVWGE*VAPMWNSLS*IKSLPTMRPTEWLHDHSHCFSIGEA*S*RAELPVQAQHLSHF*GVVPRRRP*YDVLG*SL*SF*HLRQV*HKW*N*GD*P*WQDFCLI*HN**THKAC*EDWKWPSEHKSG*VAEGQAIRS*FSVNEWVQDNLLPKL*AG*KIAREFA  693
                +H*WSCLKGWY IFCG+*MPSKSKPLSSNHSQTIGRECLCRE*DDCLILH*APCEADSDHTRI*SQLEVWGE*VAPMWNSLS*IKSLPTMRPTEWLHDHSHCFSIGEA*S*RAEL VQAQH SHF GVVPRRRP YDVLG*SL*SF*HLRQV*HKW*N*GD*P*WQDFCLI*HN**THKAC*E+WKW SEHKSG*+AEGQAIRS*FSVNEWVQDNLLPKL*AG*KIAR FA
Subject   3324  QH*WSCLKGWYSIFCGE*MPSKSKPLSSNHSQTIGRECLCRE*DDCLILH*APCEADSDHTRI*SQLEVWGE*VAPMWNSLS*IKSLPTMRPTEWLHDHSHCFSIGEA*S*RAELSVQAQHQSHFRGVVPRRRPQYDVLG*SL*SF*HLRQV*HKW*N*GD*P*WQDFCLI*HN**THKAC*ENWKWSSEHKSG*IAEGQAIRS*FSVNEWVQDNLLPKL*AG*KIARMFA  4016

Range 7: 3063 to 3278 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
150.4 bits(322) 0.0 67/72(93%) 0/72(0%) Minus/Plus
Query      739  GIF*GIQRGLQHQENGGRLHFCDNI*GSS*VNWQIEGSQN*MLIFRVQGGVARLPD*SMC*L*Y**LQYLLC  954
                GIF*GIQRGLQHQENGGRLHFCDNI*GSS*++ QIEG QN*MLIFRVQGGVARLPD*SMC*L*Y** QYLLC
Subject   3063  GIF*GIQRGLQHQENGGRLHFCDNI*GSS*IHRQIEGPQN*MLIFRVQGGVARLPD*SMC*L*Y**FQYLLC  3278

Rupestris stem pitting associated virus strain BS, complete genome

Sequence ID: AY881627.1 Length: 8743 Number of Matches: 7

Range 1: 3064 to 4014 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
762.2 bits(1657) 0.0 312/317(98%) 0/317(0%) Minus/Plus
Query        3  GSFEVFKGDFNIKKMEEGSIFVITYKAPVRSTGKLRVHKTECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLGTDGLALKAGIRSFVESECLVSPNLSAPTIHKQLGENVYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCKPSTYHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGSGPQSIKVDELRKVKRSALDFLSMNGSKITYFPNFERAEKLQGSL  953
                GSF+VFKGDFNIKKMEEGSIFVITYKAPVRSTGKLRVHKTECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLL TDGLALKAGIRSFVESECLVSP+LSAPTIHKQLGENVYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCKPST HIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGSGPQSIKVDELRKVKRSALDFLSMNGSKITYFPNFERAEKLQG L
Subject   3064  GSFKVFKGDFNIKKMEEGSIFVITYKAPVRSTGKLRVHKTECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESECLVSPSLSAPTIHKQLGENVYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCKPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGSGPQSIKVDELRKVKRSALDFLSMNGSKITYFPNFERAEKLQGCL  4014

Range 2: 3062 to 4015 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
698.0 bits(1517) 0.0 306/318(96%) 0/318(0%) Minus/Plus
Query        2  WDLLRYSKGTSTSRKWRKAPFL**HIRLQLGQLAN*GFTKLNAHFPGPRRCC*AARLKHVLIMILMTSIPSLCLVMVIVFGIQLVFCSALMVLP*RLVLDLLWKVNA**VQTSQLQPFTNNWERMFMPRMR*LPYFALGTM*G***SHQNMKSVGSLGRVSGPYVEFFVLNQITSNHAPH*MVA*SQPLLQHWGGVKLTC*ITCASPAPITFLRSCAKEAALI*CTWLKPLKLLTFAPSVT*MVKLR*LTLMARFLPYLT*LMNT*GMLRRLEVALRA*KWMSCGRSSDPLLIFCQ*MGPR*PTSQTLSGLKNCKGVC  955
                WDLLRYSKGTSTSRKWRKAPFL**HIRL+LG  AN*GFTKLNAHFPGPRRCC*AARLKHVLIMILMTSIPSLCLVMVIVFGIQ VF SALMVLP*RLV DLLW+VNA**VQ SQLQPFTNNWERMFMPRMR*LPYFALGTM*G***SHQNMKSVGSLGRVSGPYVEFFVLNQITSNHAPH*MVA*SQPLLQHWGGVKLTC*I CASPAPITFLRSCAKEAALI*CTWLKPLKLLTFAPSVT*MVKLR*LTLMARFLPYLT*LMNT*GMLRRLEV LRA*KWM+CGRSSDPLLIFCQ*MGPR*PTSQTLSGLKNCK VC
Subject   3062  WDLLRYSKGTSTSRKWRKAPFL**HIRLRLGPPAN*GFTKLNAHFPGPRRCC*AARLKHVLIMILMTSIPSLCLVMVIVFGIQSVFYSALMVLP*RLVFDLLWRVNA**VQASQLQPFTNNWERMFMPRMR*LPYFALGTM*G***SHQNMKSVGSLGRVSGPYVEFFVLNQITSNHAPH*MVA*SQPLLQHWGGVKLTC*IICASPAPITFLRSCAKEAALI*CTWLKPLKLLTFAPSVT*MVKLR*LTLMARFLPYLT*LMNT*GMLRRLEVVLRA*KWMNCGRSSDPLLIFCQ*MGPR*PTSQTLSGLKNCKDVC  4015

Range 3: 3119 to 4015 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
697.1 bits(1515) 0.0 285/299(95%) 0/299(0%) Plus/Minus
Query        2  ANSLAIFQPAQSLGSRLSWTHSLTENQERIA*PSATHPLLCSEGHFQSSQHALCVH*LCQIRQKSCH*G*SPQFHHLCHTWRKCQKLQRLQPSTSY*GRLLGTTPQKCDRCWACTGNSARQLHASPMLKQWL*SCNHSVGRMVGSDLI*DKEFHIGATHSPQTSN*LHILV*SLSASHGA*CKIRQSSHSRHKHSLPIVCEWLELRGLDLLGIHFPQKI*YQPLRQDHQCRAKNQLNAKNNYHHQAQRRY*SHQYHNQHMLQSGSLATPPWTRKMSIQFCEPSICQLT*LEPYMLSQKW  898
                AN LAIFQPAQSLGSRLSWTHSLTENQERIA*PSA HPLLCSE HFQSSQHALCVH*LCQIRQKSCH*G*SPQFHHLCHTWRKCQKLQRLQPSTSY*GRLLGTTPQKCD CWACT NSARQLHASPMLKQWL*SCNHSVGRMVGSDLI*DKEFHIGATHSPQTSN*LHILV*SLSASHGA*CKIRQSSHSRHKHSLP+VCEWLELRGLDLLGIH PQKI YQPLRQDHQC  KN+LNAKNNYHHQAQRRY*SHQYHNQHMLQSGSLATPPWTRKMSIQFCEPSIC+ T* EPYMLSQKW
Subject   3119  ANILAIFQPAQSLGSRLSWTHSLTENQERIA*PSAIHPLLCSEDHFQSSQHALCVH*LCQIRQKSCH*G*SPQFHHLCHTWRKCQKLQRLQPSTSY*GRLLGTTPQKCDWCWACTDNSARQLHASPMLKQWL*SCNHSVGRMVGSDLI*DKEFHIGATHSPQTSN*LHILV*SLSASHGA*CKIRQSSHSRHKHSLPVVCEWLELRGLDLLGIHSPQKIEYQPLRQDHQC*VKNRLNAKNNYHHQAQRRY*SHQYHNQHMLQSGSLATPPWTRKMSIQFCEPSICRWT*PEPYMLSQKW  4015

Range 4: 3064 to 4014 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
692.5 bits(1505) 0.0 306/317(97%) 0/317(0%) Plus/Minus
Query        3  QTPLQFFSPLKVWEVGYLGPIH*QKIKSGSLDLPQLIHFYALRATSNLLNMPYVFISYVK*GRNLAIRVNHLNFTIYVTLGANVKSFKGFSQVHHIKAASLAQLLKNVIGAGLAQVIQHVNFTPPQC*SNGCDHATIQWGAWLEVI*FKTKNSXXXXXXXXXXXXDFIFWCDHYQPHMVPNAK*GNHLILGINILSQLFVNGWS*EVWTY*AFTFHKRSNTSL*GKTISAEQKTN*MPKTITITRHREGIEVINIIISTCFNLAA*QHLLGPGK*AFSFVNPQFAS*PNWSLICYHKNGAFLHFLDVEVPFEYLKRS  953
                QT LQFFSPLKVWEVGYLGPIH*QKIKSGSLDLPQ IHFYALR TSNLLNMPYVFISYVK*GRNLAIRVNHLNFTIYVTLGANVKSFKGFSQVHHIKAASLAQLLKNVIGAGLAQ+IQHVNFTPPQC*SNGCDHATIQWGAWLEVI*FKTKNST*GPLTLPKLPTDFIFWCDHYQPHMVPNAK*GNHLILGINILSQLFVNGWS*E WTY*AFT HKRSNTSL*GKTISAE KT+*MPKTITITRHREGIEVINIIISTCFNLAA*QHLLGPGK*AFSFVNPQFA  PN SLICYHKNGAFLHFLDVEVPFEYLKRS
Subject   3064  QTSLQFFSPLKVWEVGYLGPIH*QKIKSGSLDLPQFIHFYALRTTSNLLNMPYVFISYVK*GRNLAIRVNHLNFTIYVTLGANVKSFKGFSQVHHIKAASLAQLLKNVIGAGLAQIIQHVNFTPPQC*SNGCDHATIQWGAWLEVI*FKTKNST*GPLTLPKLPTDFIFWCDHYQPHMVPNAK*GNHLILGINILSQLFVNGWS*EAWTY*AFTLHKRSNTSL*GKTISAE*KTD*MPKTITITRHREGIEVINIIISTCFNLAA*QHLLGPGK*AFSFVNPQFAGGPNRSLICYHKNGAFLHFLDVEVPFEYLKRS  4014

Range 5: 3063 to 4016 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
666.8 bits(1449) 0.0 311/318(98%) 0/318(0%) Plus/Minus
Query        1  SKLPCNFSARSKFGK*VILDPFIDRKSRADRLTFRNSSTFML*GPLPIFSTCLMCSLVMSNKAEILPLGLITSISPFMSHLAQMXXXXXXXXXYIILRPPPWHNSSKM**VLGLHR*FSTSTSRLPNAEAMAVIMQPFSGAHGWK*FDLRQRIPHRGHSLSPNFQLTSYSGVITISLTWCLMQNKAIISFSA*TFSPNCL*MVGAERFGLTRHSLSTKDLIPAFKARPSVPSKKPTECQKQLPSPGTEKVLKXXXXXXXXXXXWQPSNTSLDPENEHSVL*TLNLPVDLTGALYVITKMEPSSIFLMLKSPLNTSKDP  954
                SK PCNFSARSKFGK*VILDPFIDRKSRADRLTFRNSSTFML*GPLPIFSTCLMCSLVMSNKAEILPLGLITSISPFMSHLAQMSKASKASAKYIILRPPPWHNSSKM* VLGLHR*FSTSTSRLPNAEAMAVIMQPFSGAHGWK*FDLRQRIPHRGHSLSPNFQLTSYSGVITISLTWCLMQNKAIISFSA*TFSP+CL*MVGAER GLTRHSLSTKD IPAFKARPSV SKKPTECQKQLPSPGTEKVLKSSIS*SAHASIWQPSNTSLDPENEHSVL*TLNLPVDLTGALYVITKMEPSSIFLMLKSPLNT KDP
Subject   3063  SKHPCNFSARSKFGK*VILDPFIDRKSRADRLTFRNSSTFML*GPLPIFSTCLMCSLVMSNKAEILPLGLITSISPFMSHLAQMSKASKASAKYIILRPPPWHNSSKM*LVLGLHR*FSTSTSRLPNAEAMAVIMQPFSGAHGWK*FDLRQRIPHRGHSLSPNFQLTSYSGVITISLTWCLMQNKAIISFSA*TFSPSCL*MVGAERLGLTRHSLSTKDRIPAFKARPSVLSKKPTECQKQLPSPGTEKVLKSSIS*SAHASIWQPSNTSLDPENEHSVL*TLNLPVDLTGALYVITKMEPSSIFLMLKSPLNTLKDP  4016

Range 6: 3324 to 4016 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
488.1 bits(1059) 0.0 222/231(96%) 0/231(0%) Minus/Plus
Query        1  RH*WSCLKGWY*IFCGXXXXXXXXXXXSNHSQTIGRECLCRE*DDCLILH*APCEADSDHTRI*SQLEVWGE*VAPMWNSLS*IKSLPTMRPTEWLHDHSHCFSIGEA*S*RAELPVQAQHLSHF*GVVPRRRP*YDVLG*SL*SF*HLRQV*HKW*N*GD*P*WQDFCLI*HN**THKAC*EDWKWPSEHKSG*VAEGQAIRS*FSVNEWVQDNLLPKL*AG*KIAREFA  693
                +H*WSCLKGWY IFCG+*MPSKSKPLSSNHSQT GRECLCRE*DDCLILH*APCEADSDHTRI*SQLEVWGE*VAPMWNSLS*IKSLPTMRPTEWLHDHSHCFSIGEA*S*RAEL VQAQH SHF*GVVPRRRP*YDVLG*SL*SF*HLRQV*HKW*N*GD*P*WQDFCLI*HN**THKAC*EDWKW SEHKSG*+AEGQAIRS*FSVNEWVQDNLLPKL*AG*KIAR FA
Subject   3324  QH*WSCLKGWYSIFCGE*MPSKSKPLSSNHSQTTGRECLCRE*DDCLILH*APCEADSDHTRI*SQLEVWGE*VAPMWNSLS*IKSLPTMRPTEWLHDHSHCFSIGEA*S*RAELSVQAQHQSHF*GVVPRRRP*YDVLG*SL*SF*HLRQV*HKW*N*GD*P*WQDFCLI*HN**THKAC*EDWKWSSEHKSG*IAEGQAIRS*FSVNEWVQDNLLPKL*AG*KIARMFA  4016

Range 7: 3063 to 3278 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
153.2 bits(328) 0.0 69/72(96%) 0/72(0%) Minus/Plus
Query      739  GIF*GIQRGLQHQENGGRLHFCDNI*GSS*VNWQIEGSQN*MLIFRVQGGVARLPD*SMC*L*Y**LQYLLC  954
                GIF*GIQRGLQHQENGGRLHFCDNI*GS *V+ QIEGSQN*MLIFRVQGGVARLPD*SMC*L*Y**LQYLLC
Subject   3063  GIF*GIQRGLQHQENGGRLHFCDNI*GSG*VHRQIEGSQN*MLIFRVQGGVARLPD*SMC*L*Y**LQYLLC  3278

Grapevine rupestris stem pitting associated virus isolate TEMP BR replicase, 24.4 kDa protein, 12.8 kDa protein, 8.4 kDa protein, and 28 kDa protein genes, complete cds

Sequence ID: KX925556.1 Length: 8700 Number of Matches: 7

Range 1: 3053 to 4003 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
733.3 bits(1594) 0.0 299/317(94%) 0/317(0%) Minus/Plus
Query        3  GSFEVFKGDFNIKKMEEGSIFVITYKAPVRSTGKLRVHKTECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLGTDGLALKAGIRSFVESECLVSPNLSAPTIHKQLGENVYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCKPSTYHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGSGPQSIKVDELRKVKRSALDFLSMNGSKITYFPNFERAEKLQGSL  953
                GSFEVFKGDFNIKKMEEGSIFVI+YKAPVRSTGKLRVHK+ECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLL TDGLALKAGIRSFVESE LVS +LSAPT+ KQL EN YAENEMIALFCIRHHVRLIV+TPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVD+LNYLC+PST HIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIG+GPQSIKVDELRKVKRSALD LSMNGS+ITYFPNFERAEKLQG L
Subject   3053  GSFEVFKGDFNIKKMEEGSIFVISYKAPVRSTGKLRVHKSECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESERLVSSDLSAPTVSKQLEENAYAENEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDILNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSRITYFPNFERAEKLQGCL  4003

Range 2: 3052 to 4005 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
599.0 bits(1301) 0.0 282/318(89%) 0/318(0%) Plus/Minus
Query        1  SKLPCNFSARSKFGK*VILDPFIDRKSRADRLTFRNSSTFML*GPLPIFSTCLMCSLVMSNKAEILPLGLITSISPFMSHLAQMXXXXXXXXXYIILRPPPWHNSSKM**VLGLHR*FSTSTSRLPNAEAMAVIMQPFSGAHGWK*FDLRQRIPHRGHSLSPNFQLTSYSGVITISLTWCLMQNKAIISFSA*TFSPNCL*MVGAERFGLTRHSLSTKDLIPAFKARPSVPSKKPTECQKQLPSPGTEKVLKXXXXXXXXXXXWQPSNTSLDPENEHSVL*TLNLPVDLTGALYVITKMEPSSIFLMLKSPLNTSKDP  954
                SK PCNFSARSKFGK*VILDPFI+R+SRADRLTF NSSTFML*GPLPIFSTCLMCSLV+SN+AEILP GL+TSISPFMSHLAQ+SKASKASAKYIIL PPPWH+SSKM* VLGLHR*F  STSRLP+AEAMAVIMQPFSGAHGWK* D RQRIPHRGHSLSPNFQLTSYSGV TISLTWC +QN AIISFSA* FS NCL  VGAER  LTR SLSTKD +PAF+A+PSV SKKPTECQKQLPSPGTEKVLKSSIS*SAHASIWQPSNTSLDPENEHS L*TLNLPVDLTGALY ITKMEPSSIFLMLKSPL TSKDP
Subject   3052  SKHPCNFSARSKFGK*VILDPFIERRSRADRLTFLNSSTFML*GPLPIFSTCLMCSLVISNRAEILPFGLMTSISPFMSHLAQISKASKASAKYIILSPPPWHSSSKM*LVLGLHR*FKISTSRLPSAEAMAVIMQPFSGAHGWK*LDFRQRIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQNNAIISFSA*AFSSNCLETVGAERSELTRRSLSTKDRMPAFRAKPSVLSKKPTECQKQLPSPGTEKVLKSSIS*SAHASIWQPSNTSLDPENEHSDL*TLNLPVDLTGALYDITKMEPSSIFLMLKSPLKTSKDP  4005

Range 3: 3059 to 4003 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
462.9 bits(1004) 0.0 211/315(67%) 0/315(0%) Plus/Minus
Query        3  QTPLQFFSPLKVWEVGYLGPIH*QKIKSGSLDLPQLIHFYALRATSNLLNMPYVFISYVK*GRNLAIRVNHLNFTIYVTLGANVKSFKGFSQVHHIKAASLAQLLKNVIGAGLAQVIQHVNFTPPQC*SNGCDHATIQWGAWLEVI*FKTKNSXXXXXXXXXXXXDFIFWCDHYQPHMVPNAK*GNHLILGINILSQLFVNGWS*EVWTY*AFTFHKRSNTSL*GKTISAEQKTN*MPKTITITRHREGIEVINIIISTCFNLAA*QHLLGPGK*AFSFVNPQFAS*PNWSLICYHKNGAFLHFLDVEVPFEYLK  947
                Q PLQ FSPLKVW++GY GPIH*+K+K   L+LPQ I+FYALRA ++LL+MPYV I Y+K GRNL I VN LNF IYVTL AN+K FK FSQVHHIK +SLAQLLKNVI A   Q+I ++NFTPP+ * NG DHATIQWGAWLEVI  + KNST*GPLT PK PT+FIFWC +YQ +MVP+ +  NHLIL I+I  QLF NGWS*++ T *A T HKRSN SL   T+S E +TN*MPK I +TR+RE I++INIIISTC  LA *Q+LLGPGK*A  FVNP F    NW L+ YHKNGA LHF DVEVP E  K
Subject   3059  QAPLQLFSPLKVWKIGYSGPIH*KKVKGRPLNLPQFIYFYALRAIADLLDMPYVLIGYIKQGRNLTIWVNDLNFPIYVTLSANIKGFKSFSQVHHIKPSSLAQLLKNVISARSTQII*NINFTPPKR*GNGRDHATIQWGAWLEVIGLQAKNST*GPLTFPKFPTNFIFWCYYYQSYMVPDTEQCNHLILSISIFFQLFRNGWS*KI*TN*ALTLHKRSNASLQS*TVSTE*ETN*MPKAIAVTRYRESIKIINIIISTCLYLAT*QYLLGPGK*AL*FVNP*FTGGSNWGLV*YHKNGALLHFFDVEVPLENFK  4003

Range 4: 3108 to 4004 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
430.9 bits(934) 0.0 195/299(65%) 0/299(0%) Plus/Minus
Query        2  ANSLAIFQPAQSLGSRLSWTHSLTENQERIA*PSATHPLLCSEGHFQSSQHALCVH*LCQIRQKSCH*G*SPQFHHLCHTWRKCQKLQRLQPSTSY*GRLLGTTPQKCDRCWACTGNSARQLHASPMLKQWL*SCNHSVGRMVGSDLI*DKEFHIGATHSPQTSN*LHILV*SLSASHGA*CKIRQSSHSRHKHSLPIVCEWLELRGLDLLGIHFPQKI*YQPLRQDHQCRAKNQLNAKNNYHHQAQRRY*SHQYHNQHMLQSGSLATPPWTRKMSIQFCEPSICQLT*LEPYMLSQKW  898
                A++LA FQPAQSL +RL WTHSL E Q + A*PS+ H LLCSEGH +SS+HALC H L Q  QKS H G* PQF HLCHT RK Q+LQ+LQPSTSY*  L GT PQKCD C   T N   QLHAS  L+QW *SCNHSVGRMVGSD    KEFHIGATH PQ SN*LHILV  LS  HGA  +  QSSHS+HKH LPIV + LEL+ L+ LG H PQKI  QP   + Q   +NQLNAK+N  HQ QR+Y*+HQYHNQHM  SG+LA PPWTRKMS   CEP I +  *L P M+SQKW
Subject   3108  ASTLATFQPAQSLENRLFWTHSLKEGQGQTA*PSSIHLLLCSEGHCRSSRHALCAHWLYQTGQKSYHLG**PQFPHLCHT*RKYQRLQKLQPSTSY*ALLPGTAPQKCD*C*VYTDNLKYQLHASQALRQWP*SCNHSVGRMVGSDWTSGKEFHIGATHFPQISN*LHILVLLLSVLHGAGYRTMQSSHSQHKHFLPIV*KRLELKDLN*LGAHSPQKIECQPSELNRQY*VRNQLNAKSNCRHQVQRKY*NHQYHNQHMPLSGNLAIPPWTRKMSTLICEPLIYRWI*LGPCMISQKW  4004

Range 5: 3051 to 4004 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
427.7 bits(927) 0.0 214/318(67%) 0/318(0%) Minus/Plus
Query        2  WDLLRYSKGTSTSRKWRKAPFL**HIRLQLGQLAN*GFTKLNAHFPGPRRCC*AARLKHVLIMILMTSIPSLCLVMVIVFGIQLVFCSALMVLP*RLVLDLLWKVNA**VQTSQLQPFTNNWERMFMPRMR*LPYFALGTM*G***SHQNMKSVGSLGRVSGPYVEFFVLNQITSNHAPH*MVA*SQPLLQHWGGVKLTC*ITCASPAPITFLRSCAKEAALI*CTWLKPLKLLTFAPSVT*MVKLR*LTLMARFLPYLT*LMNT*GMLRRLEVALRA*KWMSCGRSSDPLLIFCQ*MGPR*PTSQTLSGLKNCKGVC  955
                W  L++S+GTSTS+KWR+APFL* H R QL    N*GFT  +AHFPGPRR C* AR +HVLIMILM  I SL LV  I FGIQLV  S L V  *RL  DLLW+V+A* VQ  QLQPF NNW++M M RMR*L     GTM* *** HQNMK VG+LG+VSGPYVEFF  + ITSNHAPH*MVA*S+PL Q  GGVKL  *I C   A ITFLRSCA+E  LI*CTWLK LK L FA SVT*M KLR LT M RFLP L * M+T*GM RR  +ALRA*K M+ GR S   L F Q*MGP *P  QTLSGLK+CKG C
Subject   3051  WGPLKFSRGTSTSKKWRRAPFL*YHTRPQLDPPVN*GFTNQSAHFPGPRRYC*VAR*RHVLIMILMILILSLYLVTAIAFGIQLVSYSVLTV*L*RLAFDLLWRVSA*LVQIFQLQPFLNNWKKMLMLRMR*LHCSVSGTM*D****HQNMKLVGNLGKVSGPYVEFFA*SPITSNHAPH*MVA*SRPLPQRLGGVKLIF*IICVDLALITFLRSCAREEGLI*CTWLKLLKPLIFALSVT*MGKLRSLTQMVRFLPCLI*PMST*GMSRRSAMALRA*K*MN*GRLSGLPLTFFQ*MGPE*PIFQTLSGLKSCKGAC  4004

Range 6: 3409 to 4005 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
297.5 bits(643) 0.0 136/199(68%) 0/199(0%) Minus/Plus
Query        1  TIGRECLCRE*DDCLILH*APCEADSDHTRI*SQLEVWGE*VAPMWNSLS*IKSLPTMRPTEWLHDHSHCFSIGEA*S*RAELPVQAQHLSHF*GVVPRRRP*YDVLG*SL*SF*HLRQV*HKW*N*GD*P*WQDFCLI*HN**THKAC*EDWKWPSEHKSG*VAEGQAIRS*FSVNEWVQDNLLPKL*AG*KIAREFA  597
                TIGR+CLC E*DDC++L+ APC+ DS +TRI*S LE+WG+*VAPMWNSL  ++SLPTMRPTEWLHDH HC S  EA*S*  +L V   H SHF*G VP RR *YDVLG*S *S *+LR V*HKW N*G *P W DFC +*+N * HKAC ED +WPSEHKS *+ EG A+  * S NEWVQ+NL  KL*AG*K+AR  A
Subject   3409  TIGRKCLC*E*DDCIVLYPAPCKTDSSNTRI*S*LEIWGK*VAPMWNSLPEVQSLPTMRPTEWLHDHGHCLSAWEA*S*YFKLSV*T*H*SHF*GAVPGRRA*YDVLG*SF*SL*YLR*V*HKWGN*GH*PKW*DFCPV*YNQ*AHKACREDRQWPSEHKSR*IEEG*AVCP*PSFNEWVQNNLFSKL*AG*KVARVLA  4005

Range 7: 3052 to 3267 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
103.2 bits(219) 0.0 48/72(67%) 0/72(0%) Minus/Plus
Query      739  GIF*GIQRGLQHQENGGRLHFCDNI*GSS*VNWQIEGSQN*MLIFRVQGGVARLPD*SMC*L*Y**LQYLLC  954
                G+ *  Q GLQHQ+NGG LHFCD I G S*++  I+GSQ  +LIFRVQGG+ARLPD  MC*L*Y**  Y LC
Subject   3052  GVL*SFQGGLQHQKNGGGLHFCDIIQGPS*IHR*IKGSQIRVLIFRVQGGIARLPDRGMC*L*Y**F*YFLC  3267

Grapevine rupestris stem pitting associated virus complete genome, genomic RNA, isolate GRSPaV MG

Sequence ID: FR691076.1 Length: 8749 Number of Matches: 8

Range 1: 3064 to 4014 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
732.8 bits(1593) 0.0 300/317(95%) 0/317(0%) Minus/Plus
Query        3  GSFEVFKGDFNIKKMEEGSIFVITYKAPVRSTGKLRVHKTECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLGTDGLALKAGIRSFVESECLVSPNLSAPTIHKQLGENVYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCKPSTYHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGSGPQSIKVDELRKVKRSALDFLSMNGSKITYFPNFERAEKLQGSL  953
                GSFEVFKGDF+IKKMEEGSIFVITYKAPVRSTGKLRVHK+ECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLL TDG ALKAGIRSFVESE L+S +LSAPTI KQL EN YAENEMIALFCIRHHVRLIV+TPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLC+PST HIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIG+GPQSIKVDELRKVKRSALD LSMNGSKITYFPNFERAEKLQG L
Subject   3064  GSFEVFKGDFHIKKMEEGSIFVITYKAPVRSTGKLRVHKSECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGFALKAGIRSFVESERLISSDLSAPTISKQLEENAYAENEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPNFERAEKLQGCL  4014

Range 2: 3063 to 4016 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
596.3 bits(1295) 0.0 280/318(88%) 0/318(0%) Plus/Minus
Query        1  SKLPCNFSARSKFGK*VILDPFIDRKSRADRLTFRNSSTFML*GPLPIFSTCLMCSLVMSNKAEILPLGLITSISPFMSHLAQMXXXXXXXXXYIILRPPPWHNSSKM**VLGLHR*FSTSTSRLPNAEAMAVIMQPFSGAHGWK*FDLRQRIPHRGHSLSPNFQLTSYSGVITISLTWCLMQNKAIISFSA*TFSPNCL*MVGAERFGLTRHSLSTKDLIPAFKARPSVPSKKPTECQKQLPSPGTEKVLKXXXXXXXXXXXWQPSNTSLDPENEHSVL*TLNLPVDLTGALYVITKMEPSSIFLMLKSPLNTSKDP  954
                SK PCNFSARSKFGK*VILDPFI+R+SRADRLTF NSSTFML*GPLPIFSTCLMCSLV+SNKAEILP GL+TSISPF+SHLAQ+SKASKASAKYIIL PPPWH+SSKM  VLGLHR*F+TSTSRLP+AEAMAVIMQPFSGAHGWK* D RQRIPHRGHSLSPNFQLTSYSGV TISLTWC +QN AIISFSA* FS NCL MVGAER  L R SLSTKD +PAF+A+PSV S+KPTECQKQLPSPGTEKVLKSSIS*SAHASIWQPSNTSLDPENEHS L TLNLPVDLTGALYVITKMEPSSIFLM KSPL TSKDP
Subject   3063  SKHPCNFSARSKFGK*VILDPFIERRSRADRLTFLNSSTFML*GPLPIFSTCLMCSLVISNKAEILPFGLMTSISPFISHLAQISKASKASAKYIILSPPPWHSSSKMWLVLGLHR*FNTSTSRLPSAEAMAVIMQPFSGAHGWK*LDFRQRIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQNNAIISFSA*AFSSNCLEMVGAERSELIRRSLSTKDRMPAFRAKPSVLSRKPTECQKQLPSPGTEKVLKSSIS*SAHASIWQPSNTSLDPENEHSDLWTLNLPVDLTGALYVITKMEPSSIFLMWKSPLKTSKDP  4016

Range 3: 3067 to 4014 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
481.3 bits(1044) 0.0 218/316(69%) 0/316(0%) Plus/Minus
Query        3  QTPLQFFSPLKVWEVGYLGPIH*QKIKSGSLDLPQLIHFYALRATSNLLNMPYVFISYVK*GRNLAIRVNHLNFTIYVTLGANVKSFKGFSQVHHIKAASLAQLLKNVIGAGLAQVIQHVNFTPPQC*SNGCDHATIQWGAWLEVI*FKTKNSXXXXXXXXXXXXDFIFWCDHYQPHMVPNAK*GNHLILGINILSQLFVNGWS*EVWTY*AFTFHKRSNTSL*GKTISAEQKTN*MPKTITITRHREGIEVINIIISTCFNLAA*QHLLGPGK*AFSFVNPQFAS*PNWSLICYHKNGAFLHFLDVEVPFEYLKR  950
                Q PLQ FSPLKVW++GY GPIH*+KIKSGSL+LPQLI+FYALRA ++LLNMPYV I Y+K G NL I VN LNF IY+TL AN+KS K  SQVHHIK + LAQLLKNV+GA  A +I H+NFTPP+ * NG DHATIQWGAWLEVI  + KNST*GPLT PKLPT+FIFWC +YQP++VP+ K* NHLILGI+IL QLF NGWS*++ T  A T HKRSN  L  KTIS EQKTN*MPK I ITR+ E +++INIIISTC NLA  Q+LLG GK*A  FV+P   S  NW L+CY+KNG  LHF +VEVPFE  KR
Subject   3067  QAPLQLFSPLKVWKIGYFGPIH*KKIKSGSLNLPQLIYFYALRAIADLLNMPYVLIGYIKQGGNLTIWVNDLNFPIYITLSANIKSLKSLSQVHHIKPSPLAQLLKNVVGARPA*II*HINFTPPKR*GNGRDHATIQWGAWLEVIGLQAKNST*GPLTFPKLPTNFIFWCYYYQPYVVPDTK*CNHLILGISILFQLFRNGWS*KI*TNKALTLHKRSNAGLQSKTISTEQKTN*MPKAIAITRYGESVKIINIIISTCLNLATQQYLLGSGK*AL*FVDP*LTSGSNWGLVCYYKNGTLLHFFNVEVPFEDFKR  4014

Range 4: 3062 to 4015 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
459.3 bits(996) 0.0 222/318(70%) 0/318(0%) Minus/Plus
Query        2  WDLLRYSKGTSTSRKWRKAPFL**HIRLQLGQLAN*GFTKLNAHFPGPRRCC*AARLKHVLIMILMTSIPSLCLVMVIVFGIQLVFCSALMVLP*RLVLDLLWKVNA**VQTSQLQPFTNNWERMFMPRMR*LPYFALGTM*G***SHQNMKSVGSLGRVSGPYVEFFVLNQITSNHAPH*MVA*SQPLLQHWGGVKLTC*ITCASPAPITFLRSCAKEAALI*CTWLKPLKLLTFAPSVT*MVKLR*LTLMARFLPYLT*LMNT*GMLRRLEVALRA*KWMSCGRSSDPLLIFCQ*MGPR*PTSQTLSGLKNCKGVC  955
                W LL+ SKGTST +KWR+ PFL**H R QL  L +*G T  +AHFP PRR C  ARL+HVLIMILM    S  LVM I FGIQLVFCS LMVL *R   DLLW+V+A  VQ  QLQPF NNW+RM MPRMR*L YF  GT *G*** HQNMK VGSLG+VSGPYVEFF  + ITSNHAPH*MVA*S+PL Q  GGVKL C*I  A  AP TFLRSCA+   LI*CTWL+ L+LL FA SV *M KLR LT M RF P L * M+T*GMLRR  +ALRA*K MS GR SDPLLIF Q*MGP+*P  QTLSGLK+CKG C
Subject   3062  WGLLKSSKGTSTLKKWRRVPFL**HTRPQLDPLVS*GSTNQSAHFPDPRRYCWVARLRHVLIMILMILTLSPYLVMAIAFGIQLVFCSVLMVLL*RPAFDLLWRVSALLVQIFQLQPFLNNWKRMLMPRMR*LHYFVSGTT*G****HQNMKLVGSLGKVSGPYVEFFA*SPITSNHAPH*MVA*SRPLPQRLGGVKLMC*IIYAGLAPTTFLRSCARGEGLI*CTWLRLLRLLIFALSVI*MGKLRSLTQMVRFPPCLI*PMST*GMLRRSAMALRA*K*MS*GRLSDPLLIFFQ*MGPK*PIFQTLSGLKSCKGAC  4015

Range 5: 3119 to 4015 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
441.9 bits(958) 0.0 201/299(67%) 0/299(0%) Plus/Minus
Query        2  ANSLAIFQPAQSLGSRLSWTHSLTENQERIA*PSATHPLLCSEGHFQSSQHALCVH*LCQIRQKSCH*G*SPQFHHLCHTWRKCQKLQRLQPSTSY*GRLLGTTPQKCDRCWACTGNSARQLHASPMLKQWL*SCNHSVGRMVGSDLI*DKEFHIGATHSPQTSN*LHILV*SLSASHGA*CKIRQSSHSRHKHSLPIVCEWLELRGLDLLGIHFPQKI*YQPLRQDHQCRAKNQLNAKNNYHHQAQRRY*SHQYHNQHMLQSGSLATPPWTRKMSIQFCEPSICQLT*LEPYMLSQKW  898
                A++LA FQPAQSL +RL WTHSL E+QERIA*PS+TH LLCSEGH +SSQHALC H L Q R+KS H G* PQF HL HT RK QK Q+ QPSTSY*    GT PQKC  C AC  N   QLHAS  L+QW *SCNHSVGRMVGSD    KEFHIGATH PQTSN*LHILV  LSA  GA  KI QSSHSRHKHSLPIV +WLEL+ L+  G H PQKI  +P  Q+HQ  A+NQLNAK+N HHQ +R+ *+HQYHNQHM QSG+ A PPW RKMS   C P   Q  *L P ML QKW
Subject   3119  ASTLATFQPAQSLENRLFWTHSLKEDQERIA*PSSTHLLLCSEGHCRSSQHALCAHWLYQTRRKSYHLG**PQFPHLYHT*RKYQKPQKPQPSTSY*ALPPGTAPQKCGWC*ACIDNLTHQLHASQALRQWP*SCNHSVGRMVGSDWTSGKEFHIGATHFPQTSN*LHILVLLLSALRGAGYKIMQSSHSRHKHSLPIV*KWLELKDLN**GAHSPQKIECRPSEQNHQY*AENQLNAKSNCHHQVRRKC*NHQYHNQHMPQSGNPAIPPWIRKMSTLICGPLTYQWI*LGPCMLLQKW  4015

Range 6: 3408 to 4016 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
309.0 bits(668) 0.0 144/203(71%) 0/203(0%) Minus/Plus
Query        1  NHSQTIGRECLCRE*DDCLILH*APCEADSDHTRI*SQLEVWGE*VAPMWNSLS*IKSLPTMRPTEWLHDHSHCFSIGEA*S*RAELPVQAQHLSHF*GVVPRRRP*YDVLG*SL*SF*HLRQV*HKW*N*GD*P*WQDFCLI*HN**THKAC*EDWKWPSEHKSG*VAEGQAIRS*FSVNEWVQDNLLPKL*AG*KIAREFA  609
                NH  TIGRECLCRE*DDC+IL+ AP +ADS +TRI*S LEVWG+*VAPMWNSL  ++SLPTMRPTEWLHDH HC S  EA*S*  +L +QA H  HF*G VP  R *YDVLG*  * F*+LR V*+KW N*G *P W DF L+*+N * HKAC*ED +WPSEHKS *V EG AIRS* S NEWVQ+NL  KL*AG*K+AR  A
Subject   3408  NHF*TIGRECLCRE*DDCIILYPAPRKADSSNTRI*S*LEVWGK*VAPMWNSLPEVQSLPTMRPTEWLHDHGHCLSAWEA*S*CVKLSMQA*HQPHF*GAVPGGRA*YDVLG*GF*GF*YLR*V*YKWGN*GH*PKW*DFRLV*YNQ*AHKAC*EDRQWPSEHKSR*VEEG*AIRS*SSFNEWVQNNLFSKL*AG*KVARVLA  4016

Range 7: 3063 to 3275 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
99.1 bits(210) 0.0 43/71(61%) 0/71(0%) Minus/Plus
Query      742  GIF*GIQRGLQHQENGGRLHFCDNI*GSS*VNWQIEGSQN*MLIFRVQGGVARLPD*SMC*L*Y**LQYLL  954
                G+F* +QRGL H +NGG  HFC+NI G S*++W ++G Q  +LIFR+QGG+A LPD* MC*L*Y**  + L
Subject   3063  GVF*SLQRGLPH*KNGGGFHFCNNIQGPS*IHW*VKGPQIRVLIFRIQGGIAGLPD*GMC*L*Y**F*HFL  3275

Range 8: 3324 to 3371 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.4 bits(47) 0.0 8/16(50%) 0/16(0%) Minus/Plus
Query      646  RH*WSCLKGWY*IFCG  693
                ++*W C +G + IFCG
Subject   3324  QY*WFCSEGRHSIFCG  3371

Grapevine rupestris stem pitting associated virus isolate SK704 C, complete genome

Sequence ID: KX274276.1 Length: 8726 Number of Matches: 7

Range 1: 3065 to 4015 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
732.8 bits(1593) 0.0 300/317(95%) 0/317(0%) Minus/Plus
Query        3  GSFEVFKGDFNIKKMEEGSIFVITYKAPVRSTGKLRVHKTECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLGTDGLALKAGIRSFVESECLVSPNLSAPTIHKQLGENVYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCKPSTYHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGSGPQSIKVDELRKVKRSALDFLSMNGSKITYFPNFERAEKLQGSL  953
                GSFEVFKGDF+IKKMEEGSIFVITYKAPVRSTGKLRVHK+ECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLL TDGLALKAGIRSFVESE LVS +LSAPTI KQL EN YAENEMIALFC+RHHVRLIV+TPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLC+PST HIFEELCQGGGLNMMYL EAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIG+GPQSIKVDELRKVKRSALD LSMNGSKITYFPNFERAEKLQG L
Subject   3065  GSFEVFKGDFHIKKMEEGSIFVITYKAPVRSTGKLRVHKSECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESERLVSSDLSAPTISKQLEENAYAENEMIALFCVRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLTEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPNFERAEKLQGCL  4015

Range 2: 3064 to 4017 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
591.2 bits(1284) 0.0 278/318(87%) 0/318(0%) Plus/Minus
Query        1  SKLPCNFSARSKFGK*VILDPFIDRKSRADRLTFRNSSTFML*GPLPIFSTCLMCSLVMSNKAEILPLGLITSISPFMSHLAQMXXXXXXXXXYIILRPPPWHNSSKM**VLGLHR*FSTSTSRLPNAEAMAVIMQPFSGAHGWK*FDLRQRIPHRGHSLSPNFQLTSYSGVITISLTWCLMQNKAIISFSA*TFSPNCL*MVGAERFGLTRHSLSTKDLIPAFKARPSVPSKKPTECQKQLPSPGTEKVLKXXXXXXXXXXXWQPSNTSLDPENEHSVL*TLNLPVDLTGALYVITKMEPSSIFLMLKSPLNTSKDP  954
                SK PC+FSARSKFGK*VILDPFI+R+SRADRLTF NSSTFML*GPLPIFSTCLMCSLV+SNKAEILP GLITSISPFMSH AQMSKASKAS KYI+L PPPWH+SSKM  VLGLHR*F+TSTSRLP+AEAMAVIMQPF+GA GWK* D RQRIPHRGHSLSPNFQLTSYSGV TISLTWC  QN AIISFSA* FS NCL +VGAER  LTR SLSTKD +PAF+ARPSV SKKPTECQKQLPSPGTEKVLKSSIS*SAHASIWQPSNTSLDPENEHS L TL+LPVDLTGALYVITKMEPSSIFLM KSPL TSKDP
Subject   3064  SKHPCSFSARSKFGK*VILDPFIERRSRADRLTFLNSSTFML*GPLPIFSTCLMCSLVISNKAEILPFGLITSISPFMSHFAQMSKASKASVKYIMLSPPPWHSSSKMWLVLGLHR*FNTSTSRLPSAEAMAVIMQPFNGAQGWK*LDFRQRIPHRGHSLSPNFQLTSYSGVTTISLTWCRTQNNAIISFSA*AFSSNCLEIVGAERSELTRRSLSTKDRMPAFRARPSVLSKKPTECQKQLPSPGTEKVLKSSIS*SAHASIWQPSNTSLDPENEHSDLWTLSLPVDLTGALYVITKMEPSSIFLMWKSPLKTSKDP  4017

Range 3: 3068 to 4015 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
481.3 bits(1044) 0.0 217/316(69%) 0/316(0%) Plus/Minus
Query        3  QTPLQFFSPLKVWEVGYLGPIH*QKIKSGSLDLPQLIHFYALRATSNLLNMPYVFISYVK*GRNLAIRVNHLNFTIYVTLGANVKSFKGFSQVHHIKAASLAQLLKNVIGAGLAQVIQHVNFTPPQC*SNGCDHATIQWGAWLEVI*FKTKNSXXXXXXXXXXXXDFIFWCDHYQPHMVPNAK*GNHLILGINILSQLFVNGWS*EVWTY*AFTFHKRSNTSL*GKTISAEQKTN*MPKTITITRHREGIEVINIIISTCFNLAA*QHLLGPGK*AFSFVNPQFAS*PNWSLICYHKNGAFLHFLDVEVPFEYLKR  950
                QTPLQ FSPLKV E+GYLGPIH*+KIK GSL+LPQ I+FYALRA +NLLNMPYV I Y+K G NL I VN+LNF IYVTL ANVKS K FSQVHH+K +SLAQLLKNV+ A   Q+I H+NFTPP+ * NGCDHATIQWGA LEVI  + KNST* PLT PK PT+FIFWC HYQP++VP+ K* NH I  I IL QLF N WS*++ T  AFTFH+RSN  L  KTIS EQ+TN*MPK I ITR+ E +++INIIISTC NLA *Q+LLG G+*A  FV+P   S  NW L+CY+KNGA LHF +VEVPFE  KR
Subject   3068  QTPLQLFSPLKVREIGYLGPIH*KKIKGGSLNLPQFIYFYALRAIANLLNMPYVLIGYIKQGGNLTIWVNNLNFPIYVTLRANVKSLKSFSQVHHVKPSSLAQLLKNVVSARPTQII*HINFTPPKR*GNGCDHATIQWGARLEVIGLQAKNST*RPLTFPKFPTNFIFWCYHYQPYVVPDTK*CNHFIFSIGILLQLFRNSWS*KI*TNQAFTFHERSNAGLQSKTISTEQETN*MPKAIAITRYGESVKIINIIISTCLNLAT*QYLLGSGE*AL*FVDP*LTSGSNWGLVCYYKNGALLHFFNVEVPFENFKR  4015

Range 4: 3063 to 4016 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
433.6 bits(940) 0.0 217/318(68%) 0/318(0%) Minus/Plus
Query        2  WDLLRYSKGTSTSRKWRKAPFL**HIRLQLGQLAN*GFTKLNAHFPGPRRCC*AARLKHVLIMILMTSIPSLCLVMVIVFGIQLVFCSALMVLP*RLVLDLLWKVNA**VQTSQLQPFTNNWERMFMPRMR*LPYFALGTM*G***SHQNMKSVGSLGRVSGPYVEFFVLNQITSNHAPH*MVA*SQPLLQHWGGVKLTC*ITCASPAPITFLRSCAKEAALI*CTWLKPLKLLTFAPSVT*MVKLR*LTLMARFLPYLT*LMNT*GMLRRLEVALRA*KWMSCGRSSDPLLIFCQ*MGPR*PTSQTLSGLKNCKGVC  955
                W LL++SKGTST +KWR+APFL**H R QL  L +*G T  +AH P PRR C* ARL+HVLIMILM    S  LVM I FGIQLV CS LMVL *R   DL WKVNA  VQ  QLQ F NNW RM M +M+*L YF  GT *G**  HQNMK VG+LG+VSG YVEFF  + ITS+ APH*MVA*SQPL Q  GGVKL C*I C   A  TFLRSCA+E  L *CT LK L+LLTFA SVT*M KLR LT M RF P L * M+T*GMLRRL +ALRA*K M+ GR SDP LIF Q*MGPR*P S+TLSGLK+CKGVC
Subject   3063  WGLLKFSKGTSTLKKWRRAPFL**HTRPQLDPLVS*GSTNQSAHSPDPRRYC*VARLRHVLIMILMILTLSPYLVMAIAFGIQLVSCSVLMVLL*RPAFDLSWKVNAWLVQIFQLQLFLNNWRRMPMLKMK*LHYFVSGTT*G**W*HQNMKLVGNLGKVSGLYVEFFA*SPITSSLAPH*MVA*SQPLPQRLGGVKLMC*IICVGLALTTFLRSCAREEGLT*CT*LKLLRLLTFARSVT*MGKLRLLTQMVRFPPCLI*PMST*GMLRRLAMALRA*K*MN*GRLSDPPLIFFQ*MGPR*PISRTLSGLKSCKGVC  4016

Range 5: 3120 to 4016 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
430.9 bits(934) 0.0 195/299(65%) 0/299(0%) Plus/Minus
Query        2  ANSLAIFQPAQSLGSRLSWTHSLTENQERIA*PSATHPLLCSEGHFQSSQHALCVH*LCQIRQKSCH*G*SPQFHHLCHTWRKCQKLQRLQPSTSY*GRLLGTTPQKCDRCWACTGNSARQLHASPMLKQWL*SCNHSVGRMVGSDLI*DKEFHIGATHSPQTSN*LHILV*SLSASHGA*CKIRQSSHSRHKHSLPIVCEWLELRGLDLLGIHFPQKI*YQPLRQDHQCRAKNQLNAKNNYHHQAQRRY*SHQYHNQHMLQSGSLATPPWTRKMSIQFCEPSICQLT*LEPYMLSQKW  898
                AN+LA FQPAQS G+RLSWTHSL E+Q RIA*PS+ H LLCSEGH QSSQHALC H L Q R+KS H G* PQF HLCHT RKCQK Q+LQ STS *  L GT PQKC  C A T N   QLHAS  L+QWL*SCNHS+GR  GSD    KEFHI ATH PQ SN*LHILV  LSA  GA  KI QS H +H+HS PIV + LEL+ L+  G+HFP+KI  +P  QDHQ  A+NQLNAK+N HHQ +R+ *+HQYHNQHM QSG+LA PPW R+MS   C P   Q  *L P ML QKW
Subject   3120  ANTLAAFQPAQSSGNRLSWTHSLKEDQGRIA*PSSIHLLLCSEGHCQSSQHALCAHWLYQTRRKSYHLG**PQFPHLCHTSRKCQKPQKLQSSTSC*ALLPGTAPQKCG*C*AYTDNLTHQLHASQALRQWL*SCNHSMGRKAGSDWTSGKEFHIEATHFPQISN*LHILVLPLSALRGAGHKIMQSFHFQHRHSPPIV*K*LELKDLN*PGVHFPRKIECRPSEQDHQY*ARNQLNAKSNCHHQVRRKC*NHQYHNQHMPQSGNLAIPPWIRRMSTLICGPLAYQWI*LGPCMLLQKW  4016

Range 6: 3409 to 4017 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
295.2 bits(638) 0.0 138/203(68%) 0/203(0%) Minus/Plus
Query        1  NHSQTIGRECLCRE*DDCLILH*APCEADSDHTRI*SQLEVWGE*VAPMWNSLS*IKSLPTMRPTEWLHDHSHCFSIGEA*S*RAELPVQAQHLSHF*GVVPRRRP*YDVLG*SL*SF*HLRQV*HKW*N*GD*P*WQDFCLI*HN**THKAC*EDWKWPSEHKSG*VAEGQAIRS*FSVNEWVQDNLLPKL*AG*KIAREFA  609
                N+  TIG ECLC +*+DC+IL  AP +ADS +TRI*S LE+WG+*VA MWNSL  ++SLP +RP EWLHDHSHC S  EA*S*  +L V A H  HF*G VP RR *+DVL *S * F*HLR+V*HKW N*G *P W DF L+*+N * HKAC*EDW+WPSEHKS *+ EG AIR * S NEWVQDNL P+L*AG*K AR FA
Subject   3409  NYF*TIGGECLC*K*NDCIILCPAPRKADSGNTRI*S*LEIWGK*VASMWNSLPEVQSLPALRPIEWLHDHSHCLSAWEA*S*CVKLSV*A*H*PHF*GAVPGRRA*HDVLD*SF*GF*HLREV*HKWGN*GY*PKW*DFRLV*YNQ*AHKAC*EDWQWPSEHKSR*IEEG*AIRP*SSFNEWVQDNLFPEL*AG*KAARVFA  4017

Range 7: 3064 to 3276 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.7 bits(209) 0.0 44/71(62%) 0/71(0%) Minus/Plus
Query      742  GIF*GIQRGLQHQENGGRLHFCDNI*GSS*VNWQIEGSQN*MLIFRVQGGVARLPD*SMC*L*Y**LQYLL  954
                G+F*  QRGL H +NGG LHFC+NI G S*++W  +G Q  +LI R+QGG+ARLPD* MC*L*Y**  + L
Subject   3064  GVF*SFQRGLPH*KNGGGLHFCNNIQGPS*IHW*AKGPQIRVLILRIQGGIARLPD*GMC*L*Y**F*HFL  3276

Nucleotide Sequence (332 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 33 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
34
68
102
136
170
204
238
272
306
332

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate CS BR, complete genome

Sequence ID: KX958435.1 Length: 8743 Number of Matches: 6

Range 1: 2561 to 2836 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
227.0 bits(489) 0.0 91/92(99%) 0/92(0%) Minus/Plus
Query       33  GNNCSLVIRPGEFFEMPRGMQNNYFHGVSNCENGRVSMTFRRQKLEDEDQVFISPQVPIEQKHEKLDRNMWQLGLHGIKKSISINGTSFSSD  308
                GNNCSLVIRPGEFFEMPRGMQNNYFHGVSNCE+GRVSMTFRRQKLEDEDQVFISPQVPIEQKHEKLDRNMWQLGLHGIKKSISINGTSFSSD
Subject   2561  GNNCSLVIRPGEFFEMPRGMQNNYFHGVSNCEDGRVSMTFRRQKLEDEDQVFISPQVPIEQKHEKLDRNMWQLGLHGIKKSISINGTSFSSD  2836

Range 2: 2560 to 2835 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
217.3 bits(468) 0.0 90/92(98%) 0/92(0%) Plus/Minus
Query       34  SEEKLVPFIEIDFLIP*RPSCHILRSSFSCFCSMGTCGLIKT*SSSSNFWRLKVMETLPFSQLETPWK*LFCIPLGISKNSPGLITRLQLFP  309
                SEEKLVPFIEIDFLIP*RPSCHILRSSFSCFCSMGTCGL+KT*SSSSNFWRLKVMETLP SQLETPWK*LFCIPLGISKNSPGLITRLQLFP
Subject   2560  SEEKLVPFIEIDFLIP*RPSCHILRSSFSCFCSMGTCGLMKT*SSSSNFWRLKVMETLPSSQLETPWK*LFCIPLGISKNSPGLITRLQLFP  2835

Range 3: 2541 to 2834 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
198.6 bits(427) 0.0 81/98(83%) 0/98(0%) Plus/Minus
Query       35  QRKSLCHLLRLIF*FHEDLAATYCDQAFHVFAQWELVD**RLDPHLPTSGV*KSWKLSHFHNWKPHGSNYFAYLWASQRIHQA*SQDCNYSPSTQPHP  328
                Q+KSLCHLLRLIF*FHEDLAATYC QAFHVFAQWELV **RLDPH PTSGV*KSWKLS  HNW+ HGSNY AYLWASQRIHQA*  DCNY P     P
Subject   2541  QKKSLCHLLRLIF*FHEDLAATYCGQAFHVFAQWELVG**RLDPHPPTSGV*KSWKLSRLHNWRLHGSNYSAYLWASQRIHQA*LPDCNYFPQPNFEP  2834

Range 4: 2564 to 2833 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
192.1 bits(413) 0.0 80/90(89%) 0/90(0%) Plus/Minus
Query       36  RGKACAIY*D*FFNSMKT*LPHIAIKLFMFLLNGNLWTNKDLILIFQLLASESHGNSPIFTIGNPMEVIILHTSGHLKEFTRPNHKTAII  305
                R KACAIY*D*FFNSMKT*LPHIA+KLFMFLLNGNLW N+DLILI QLLASESHGNSP+FTIG+ MEVIILHTSGHLKEFTRPN++TAII
Subject   2564  RRKACAIY*D*FFNSMKT*LPHIAVKLFMFLLNGNLWANEDLILILQLLASESHGNSPVFTIGDSMEVIILHTSGHLKEFTRPNYQTAII  2833

Range 5: 2565 to 2834 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
177.0 bits(380) 0.0 80/90(89%) 0/90(0%) Minus/Plus
Query       35  IIAVL*LGLVNSLRCPEVCKIITSMGFPIVKMGEFP*LSDARSWKMRIKSLLVHKFPLSKNMKSLIAICGS*VFMELKNQSQ*MAQAFPL  304
                IIAV *LGLVNSLRCPEVC+IITSM  PIVK GEFP*LSDARSW+MRIKS L HKFPLSKNMKSL AICGS*VFMELKNQSQ*MAQAF L
Subject   2565  IIAVW*LGLVNSLRCPEVCRIITSMESPIVKTGEFP*LSDARSWRMRIKSSLAHKFPLSKNMKSLTAICGS*VFMELKNQSQ*MAQAFLL  2834

Range 6: 2560 to 2835 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
152.3 bits(326) 0.0 79/92(86%) 0/92(0%) Minus/Plus
Query       34  GE*LQSCD*AW*IL*DAQRYAK*LLPWGFQL*KWESFHDFQTPEVGR*GXXXXXXXXSH*AKT*KA*SQYVAARSSWN*KINLNKWHKLFL*  309
                G+*LQS +*AW*IL*DAQRYA+*LLPW  QL*+ ESFHDFQTPEVG *GSSL+* TSSH*AKT*KA* QYVAARSSWN*KINLNKWHKLF *
Subject   2560  GK*LQSGN*AW*IL*DAQRYAE*LLPWSLQL*RRESFHDFQTPEVGG*GSSLH*PTSSH*AKT*KA*PQYVAARSSWN*KINLNKWHKLFF*  2835

Grapevine rupestris stem pitting associated virus isolate SK704 A, complete genome

Sequence ID: KX274274.1 Length: 8725 Number of Matches: 6

Range 1: 2560 to 2835 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
227.0 bits(489) 0.0 91/92(99%) 0/92(0%) Minus/Plus
Query       33  GNNCSLVIRPGEFFEMPRGMQNNYFHGVSNCENGRVSMTFRRQKLEDEDQVFISPQVPIEQKHEKLDRNMWQLGLHGIKKSISINGTSFSSD  308
                GNNCSLVIRPGEFFEMPRGMQNNYFHGVSNCENGRVSMTFRRQKLEDE+QVFISPQVPIEQKHEKLDRNMWQLGLHGIKKSISINGTSFSSD
Subject   2560  GNNCSLVIRPGEFFEMPRGMQNNYFHGVSNCENGRVSMTFRRQKLEDENQVFISPQVPIEQKHEKLDRNMWQLGLHGIKKSISINGTSFSSD  2835

Range 2: 2540 to 2833 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
222.4 bits(479) 0.0 88/98(90%) 0/98(0%) Plus/Minus
Query       35  QRKSLCHLLRLIF*FHEDLAATYCDQAFHVFAQWELVD**RLDPHLPTSGV*KSWKLSHFHNWKPHGSNYFAYLWASQRIHQA*SQDCNYSPSTQPHP  328
                QR+SLCHLLRLIF*FHEDLAATYCDQAFHVFAQWELVD**RLD HLPTSGV*KSWKLSHFHNWKPHGSNYFAYLWASQ+IHQA* QDCNY P     P
Subject   2540  QRRSLCHLLRLIF*FHEDLAATYCDQAFHVFAQWELVD**RLDSHLPTSGV*KSWKLSHFHNWKPHGSNYFAYLWASQKIHQA*LQDCNYFPQPNSGP  2833

Range 3: 2559 to 2834 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
219.6 bits(473) 0.0 91/92(99%) 0/92(0%) Plus/Minus
Query       34  SEEKLVPFIEIDFLIP*RPSCHILRSSFSCFCSMGTCGLIKT*SSSSNFWRLKVMETLPFSQLETPWK*LFCIPLGISKNSPGLITRLQLFP  309
                SEEKLVPFIEIDFLIP*RPSCHILRSSFSCFCSMGTCGLIKT* SSSNFWRLKVMETLPFSQLETPWK*LFCIPLGISKNSPGLITRLQLFP
Subject   2559  SEEKLVPFIEIDFLIP*RPSCHILRSSFSCFCSMGTCGLIKT*FSSSNFWRLKVMETLPFSQLETPWK*LFCIPLGISKNSPGLITRLQLFP  2834

Range 4: 2563 to 2832 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
205.4 bits(442) 0.0 86/90(96%) 0/90(0%) Plus/Minus
Query       36  RGKACAIY*D*FFNSMKT*LPHIAIKLFMFLLNGNLWTNKDLILIFQLLASESHGNSPIFTIGNPMEVIILHTSGHLKEFTRPNHKTAII  305
                RG+ACAIY*D*FFNSMKT*LPHIAIKLFMFLLNGNLWT+KDLILIFQLLASESHGNSPIFTIGNPMEVIILHTSGHLK+FTRPN+KTAII
Subject   2563  RGEACAIY*D*FFNSMKT*LPHIAIKLFMFLLNGNLWTDKDLILIFQLLASESHGNSPIFTIGNPMEVIILHTSGHLKKFTRPNYKTAII  2832

Range 5: 2564 to 2833 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.9 bits(419) 0.0 87/90(97%) 0/90(0%) Minus/Plus
Query       35  IIAVL*LGLVNSLRCPEVCKIITSMGFPIVKMGEFP*LSDARSWKMRIKSLLVHKFPLSKNMKSLIAICGS*VFMELKNQSQ*MAQAFPL  304
                IIAVL*LGLVN LRCPEVCKIITSMGFPIVKMGEFP*LSDARSWKMRIKSL VHKFPLSKNMKSLIAICGS*VFMELKNQSQ*MAQA PL
Subject   2564  IIAVL*LGLVNFLRCPEVCKIITSMGFPIVKMGEFP*LSDARSWKMRIKSLSVHKFPLSKNMKSLIAICGS*VFMELKNQSQ*MAQASPL  2833

Range 6: 2559 to 2834 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
173.4 bits(372) 0.0 86/92(93%) 0/92(0%) Minus/Plus
Query       34  GE*LQSCD*AW*IL*DAQRYAK*LLPWGFQL*KWESFHDFQTPEVGR*GXXXXXXXXSH*AKT*KA*SQYVAARSSWN*KINLNKWHKLFL*  309
                G+*LQSC+*AW*I *DAQRYAK*LLPWGFQL*KWESFHDFQTPEVGR* SSLY STSSH*AKT*KA*SQYVAARSSWN*KINLNKWHKL L*
Subject   2559  GK*LQSCN*AW*IF*DAQRYAK*LLPWGFQL*KWESFHDFQTPEVGR*ESSLYQSTSSH*AKT*KA*SQYVAARSSWN*KINLNKWHKLLL*  2834

Grapevine rupestris stem pitting associated virus isolate VF1, partial genome

Sequence ID: KT948710.1 Length: 8716 Number of Matches: 6

Range 1: 2561 to 2836 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
219.6 bits(473) 0.0 88/92(96%) 0/92(0%) Minus/Plus
Query       33  GNNCSLVIRPGEFFEMPRGMQNNYFHGVSNCENGRVSMTFRRQKLEDEDQVFISPQVPIEQKHEKLDRNMWQLGLHGIKKSISINGTSFSSD  308
                GN C+LVIRPGEFFEMPRGMQNNYFHGVSNCE+GRVSMTFRRQKLEDEDQVFISPQVPIEQ HEKLDRNMWQLGLHGIKKSISINGTSFSSD
Subject   2561  GNYCNLVIRPGEFFEMPRGMQNNYFHGVSNCEDGRVSMTFRRQKLEDEDQVFISPQVPIEQNHEKLDRNMWQLGLHGIKKSISINGTSFSSD  2836

Range 2: 2560 to 2835 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
207.3 bits(446) 0.0 87/92(95%) 0/92(0%) Plus/Minus
Query       34  SEEKLVPFIEIDFLIP*RPSCHILRSSFSCFCSMGTCGLIKT*SSSSNFWRLKVMETLPFSQLETPWK*LFCIPLGISKNSPGLITRLQLFP  309
                S+EKLVPFIEIDFLIP*RPSCHILRSSFS FCSMGTCGL+KT*SSSSNFWRLKVMETLP SQLETPWK*LFCIPLGISKNSPGLITRLQ FP
Subject   2560  SDEKLVPFIEIDFLIP*RPSCHILRSSFSWFCSMGTCGLMKT*SSSSNFWRLKVMETLPSSQLETPWK*LFCIPLGISKNSPGLITRLQ*FP  2835

Range 3: 2541 to 2834 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
188.9 bits(406) 0.0 77/98(79%) 0/98(0%) Plus/Minus
Query       35  QRKSLCHLLRLIF*FHEDLAATYCDQAFHVFAQWELVD**RLDPHLPTSGV*KSWKLSHFHNWKPHGSNYFAYLWASQRIHQA*SQDCNYSPSTQPHP  328
                Q K+LCHLLRLIF*FHE LAATYCDQAFH FAQWELV **+LDPH PTSGV*KSWKL   HNW+ HGSNYFAYLWASQRIHQ *S DCN  P     P
Subject   2541  QMKNLCHLLRLIF*FHEGLAATYCDQAFHGFAQWELVG**KLDPHPPTSGV*KSWKLYRLHNWRLHGSNYFAYLWASQRIHQV*SPDCNNFPQPNFEP  2834

Range 4: 2564 to 2833 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
172.9 bits(371) 0.0 74/90(82%) 0/90(0%) Plus/Minus
Query       36  RGKACAIY*D*FFNSMKT*LPHIAIKLFMFLLNGNLWTNKDLILIFQLLASESHGNSPIFTIGNPMEVIILHTSGHLKEFTRPNHKTAII  305
                R K CAIY*D*FFNSMK *LPHIAIKLFM LLNGNLW N++LILI QLLAS+SHGNS +FTIG+ MEVIILHTSGHLKEFTR NH+ AII
Subject   2564  R*KTCAIY*D*FFNSMKA*LPHIAIKLFMVLLNGNLWANENLILILQLLASKSHGNSTVFTIGDSMEVIILHTSGHLKEFTRSNHQIAII  2833

Range 5: 2565 to 2834 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
161.4 bits(346) 0.0 74/90(82%) 0/90(0%) Minus/Plus
Query       35  IIAVL*LGLVNSLRCPEVCKIITSMGFPIVKMGEFP*LSDARSWKMRIKSLLVHKFPLSKNMKSLIAICGS*VFMELKNQSQ*MAQAFPL  304
                IIA+ *L LVNSLRCPEVCKIITSM  PIVK  EFP*L DARSW+MRIK  L HKFPLSK MKSLIAICGS* FMELKNQSQ*MAQ F L
Subject   2565  IIAIW*LDLVNSLRCPEVCKIITSMESPIVKTVEFP*LLDARSWRMRIKFSLAHKFPLSKTMKSLIAICGS*AFMELKNQSQ*MAQVFHL  2834

Range 6: 2560 to 2835 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
140.4 bits(300) 0.0 74/92(80%) 0/92(0%) Minus/Plus
Query       34  GE*LQSCD*AW*IL*DAQRYAK*LLPWGFQL*KWESFHDFQTPEVGR*GXXXXXXXXSH*AKT*KA*SQYVAARSSWN*KINLNKWHKLFL*  309
                G+ LQS D* W*IL*DAQRYAK*LLPW  QL*+  SFHDF TPEVG *GSS +* TSSH*AK *KA*SQYVAAR SWN*KINLNKWHK F+*
Subject   2560  GKLLQSGD*TW*IL*DAQRYAK*LLPWSLQL*RR*SFHDF*TPEVGG*GSSFH*PTSSH*AKP*KA*SQYVAARPSWN*KINLNKWHKFFI*  2835

Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome

Sequence ID: KR054734.1 Length: 8753 Number of Matches: 6

Range 1: 2560 to 2835 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
215.1 bits(463) 0.0 84/92(91%) 0/92(0%) Minus/Plus
Query       33  GNNCSLVIRPGEFFEMPRGMQNNYFHGVSNCENGRVSMTFRRQKLEDEDQVFISPQVPIEQKHEKLDRNMWQLGLHGIKKSISINGTSFSSD  308
                GNNCSLVI+PGEFFEMPRGMQ +YFHGVSNCE+GR+SMTFRRQ+LEDE+QVFISPQVPIEQ+HEKLDRNMWQLGLHGIKKSISINGTSFSSD
Subject   2560  GNNCSLVIKPGEFFEMPRGMQKDYFHGVSNCESGRISMTFRRQRLEDENQVFISPQVPIEQRHEKLDRNMWQLGLHGIKKSISINGTSFSSD  2835

Range 2: 2559 to 2834 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.9 bits(419) 0.0 80/92(87%) 0/92(0%) Plus/Minus
Query       34  SEEKLVPFIEIDFLIP*RPSCHILRSSFSCFCSMGTCGLIKT*SSSSNFWRLKVMETLPFSQLETPWK*LFCIPLGISKNSPGLITRLQLFP  309
                SEEKLVP IEIDF IP*RPSCH+LRSSFSC CS+GTCGLIKT* SSSN WRLKV+E LP SQLETPWK* FCIPLGISKNSPGLIT+LQLFP
Subject   2559  SEEKLVPLIEIDFFIP*RPSCHMLRSSFSCLCSIGTCGLIKT*FSSSNLWRLKVIEILPLSQLETPWK*SFCIPLGISKNSPGLITKLQLFP  2834

Range 3: 2563 to 2832 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
148.6 bits(318) 0.0 63/90(70%) 0/90(0%) Plus/Minus
Query       36  RGKACAIY*D*FFNSMKT*LPHIAIKLFMFLLNGNLWTNKDLILIFQLLASESHGNSPIFTIGNPMEVIILHTSGHLKEFTRPNHKTAII  305
                R +AC I *+*FF SMKT*LPH+AI+LFM LLN NLW NK+LILIFQ LA +SH NSP FTIG+ ME+I LHTSGH +EF+R NH+TAI+
Subject   2563  RREACTID*N*FFYSMKT*LPHVAIELFMSLLNRNLWANKNLILIFQSLAPKSHRNSPAFTIGDSMEIIFLHTSGHFEEFSRLNHQTAIV  2832

Range 4: 2558 to 2833 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
140.8 bits(301) 0.0 62/92(67%) 0/92(0%) Plus/Minus
Query       35  QRKSLCHLLRLIF*FHEDLAATYCDQAFHVFAQWELVD**RLDPHLPTSGV*KSWKLSHFHNWKPHGSNYFAYLWASQRIHQA*SQDCNYSP  310
                Q++SL H L+LIF FHEDLAAT CD+AFHVFAQ ELV **+LD HLP  G *KS K S FHNW+ HG+N  AYLWA +RI QA*S +CN  P
Subject   2558  QKRSLYH*LKLIFLFHEDLAATCCDRAFHVFAQ*ELVG**KLDSHLPIFGA*KS*KFSRFHNWRLHGNNLSAYLWAFRRILQA*SPNCNCFP  2833

Range 5: 2567 to 2824 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.9 bits(264) 0.0 60/86(70%) 0/86(0%) Minus/Plus
Query       44  IAVL*LGLVNSLRCPEVCKIITSMGFPIVKMGEFP*LSDARSWKMRIKSLLVHKFPLSKNMKSLIAICGS*VFMELKNQSQ*MAQA  301
                IAV *L L NS +CPEVC+ I SM  PIVK GEF *L  A+ WKMRIK LL HKF LSK+MKS IA CGS*VFME KNQ Q M QA
Subject   2567  IAVW*LSLENSSKCPEVCRKIISMESPIVKAGEFL*LLGAKDWKMRIKFLLAHKFLLSKDMKSSIATCGS*VFME*KNQFQSMVQA  2824

Range 6: 2559 to 2834 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
110.1 bits(234) 0.0 61/92(66%) 0/92(0%) Minus/Plus
Query       34  GE*LQSCD*AW*IL*DAQRYAK*LLPWGFQL*KWESFHDFQTPEVGR*GXXXXXXXXSH*AKT*KA*SQYVAARSSWN*KINLNKWHKLFL*  309
                G+ LQ  D*AW IL +AQRYA+ L PW  QL*K E+F+DF  P++GR* SS Y* TSS+*AKT*KA SQ+VAARSSWN KIN N+W+KL  *
Subject   2559  GKQLQFGD*AWRILRNAQRYAERLFPWSLQL*KRENFYDF*APKIGR*ESSFY*PTSSY*AKT*KARSQHVAARSSWNKKINFNQWYKLLF*  2834

Rupestris stem pitting associated virus isolate RSPaV PN, complete genome

Sequence ID: AY368172.2 Length: 8743 Number of Matches: 6

Range 1: 2560 to 2835 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
211.8 bits(456) 0.0 82/92(89%) 0/92(0%) Minus/Plus
Query       33  GNNCSLVIRPGEFFEMPRGMQNNYFHGVSNCENGRVSMTFRRQKLEDEDQVFISPQVPIEQKHEKLDRNMWQLGLHGIKKSISINGTSFSSD  308
                GNNCSL +RPGEFFEMPRGMQ+NYFHG+SNCE GRVSMTFRRQKLED+D VFISPQVPIEQ+HEKLDRNMWQLGLHGIKKSI+ING+SFSSD
Subject   2560  GNNCSLEVRPGEFFEMPRGMQSNYFHGISNCEGGRVSMTFRRQKLEDDDPVFISPQVPIEQRHEKLDRNMWQLGLHGIKKSIAINGSSFSSD  2835

Range 2: 2559 to 2834 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
183.4 bits(394) 0.0 78/92(85%) 0/92(0%) Plus/Minus
Query       34  SEEKLVPFIEIDFLIP*RPSCHILRSSFSCFCSMGTCGLIKT*SSSSNFWRLKVMETLPFSQLETPWK*LFCIPLGISKNSPGLITRLQLFP  309
                SEEKL P I IDFLIP*RPSCHILRSSFSC CSMGTCGL+KT SSSSNFWRLKV++TLP SQLE P K*L CIPLGISKNSPGL +RLQLFP
Subject   2559  SEEKLEPLIAIDFLIP*RPSCHILRSSFSCLCSMGTCGLMKTGSSSSNFWRLKVIDTLPPSQLEIP*K*LLCIPLGISKNSPGLTSRLQLFP  2834

Range 3: 2561 to 2833 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
133.0 bits(284) 0.0 63/91(69%) 0/91(0%) Plus/Minus
Query       35  QRKSLCHLLRLIF*FHEDLAATYCDQAFHVFAQWELVD**RLDPHLPTSGV*KSWKLSHFHNWKPHGSNYFAYLWASQRIHQA*SQDCNYS  307
                QRK+L H L+L  *FHEDLAATY DQ  HVFA+W LV **RLD H P  GV*KS  L   HNWK H SN  AY  ASQRIHQA* QDCNYS
Subject   2561  QRKNLSH*LQLTS*FHEDLAATYYDQVSHVFARWGLVG**RLDHHPPIFGV*KSSTLFRPHNWKSHESNCSAYP*ASQRIHQA*PQDCNYS  2833

Range 4: 2560 to 2832 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
131.7 bits(281) 0.0 59/91(65%) 0/91(0%) Plus/Minus
Query       36  RGKACAIY*D*FFNSMKT*LPHIAIKLFMFLLNGNLWTNKDLILIFQLLASESHGNSPIFTIGNPMEVIILHTSGHLKEFTRPNHKTAIIP  308
                RGK  AI  +*  NSMKT*LPHI IK  M LL+G+LW ++D I+I Q LAS+SH +S   TIGNPM+VI LHT  HLKEFTRP+ KTAIIP
Subject   2560  RGKT*AIDCN*LLNSMKT*LPHITIKFLMSLLDGDLWADEDWIIILQFLASKSHRHSSALTIGNPMKVIALHTPRHLKEFTRPDLKTAIIP  2832

Range 5: 2561 to 2833 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
129.4 bits(276) 0.0 59/91(65%) 0/91(0%) Minus/Plus
Query       35  GIIAVL*LGLVNSLRCPEVCKIITSMGFPIVKMGEFP*LSDARSWKMRIKSLLVHKFPLSKNMKSLIAICGS*VFMELKNQSQ*MAQAFPL  307
                GIIAVL  GLVNSLRC  VC+ IT MGFPIV+  E  *L DA++W+M I+S   HK P SK+M++LI ICGS*VFMEL++Q Q MAQ FPL
Subject   2561  GIIAVLRSGLVNSLRCLGVCRAITFMGFPIVRAEECR*LLDAKNWRMMIQSSSAHKSPSSKDMRNLIVICGS*VFMELRSQLQSMAQVFPL  2833

Range 6: 2562 to 2834 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
96.8 bits(205) 0.0 58/91(64%) 0/91(0%) Minus/Plus
Query       34  E*LQSCD*AW*IL*DAQRYAK*LLPWGFQL*KWESFHDFQTPEVGR*GXXXXXXXXSH*AKT*KA*SQYVAARSSWN*KINLNKWHKLFL*  306
                E*LQS   AW*IL*DA  YA+ LL W FQL*  +S  DF TP++G * SSL+  TS H AKT*+ *S YVAARSSWN*++N N+W K FL*
Subject   2562  E*LQS*GQAW*IL*DA*GYAEQLLSWDFQL*GRKSVDDF*TPKIGG**SSLHQPTSPHRAKT*ET*S*YVAARSSWN*EVNCNQWLKFFL*  2834

Nucleotide Sequence (1316 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 33 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
132
264
396
528
660
792
924
1056
1188
1316

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 9

Range 1: 3322 to 4635 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1030.7 bits(2243) 0.0 429/438(98%) 0/438(0%) Minus/Plus
Query        2  LSTDGLALKAGIRSFVESESTVDPALSSLTIQKQLGENAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVEVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLVEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMT  1315
                LSTDGLALKAGIRSFVESES VDPALS  TI+KQLGENAYAENEMIALFC+RHHVRLIIITPEYEVSWKFGE+EWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREV+VLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMD+ECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRL+EGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMT
Subject   3322  LSTDGLALKAGIRSFVESESPVDPALSGPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMT  4635

Range 2: 3322 to 4635 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
875.8 bits(1905) 0.0 380/438(87%) 0/438(0%) Plus/Minus
Query        2  SHGAFFEVTG*S*IKHWIYEPPTLQVVPI*LSFDQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*INVTRGE*LNFIKDHAMTSL*ACNFSKKDFKGNDIPTLLL*FACLHHLTLIIHFQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCAKHDCQFSLFDVRSRHSSKPRF*IIKFLITYHAS*TSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPVTNLFDMPNVFIRYVKQSRYAPAWINNLNFTIDITFGTDVESFKSFC*IHHVQTPPLT*FFKNVIGAGST*VIKNLYLTPSKC*CNSCDHAAIKRGTRLEMIGL*TQNST*GPLTFPKLPAHLIFWCYNDQPHMMPNAE*SNHFILCVSIFXXXXXXXXXXXXWVNC*LTFHKRPYSCLQS*TICAK  1315
                SHGAFFEVTG*S*IKHWIY+P  LQVVPI*LSF+QPQYVTLF TQNSSIFLRIICALTRITSKRDESVTA+NKKT*I+VTR E*LNFIKDHAMTSL*ACNF K+DFKGN+IP LLL*FACLHHLTL IHF VPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKC KH+CQFSLFDVRS HSSKPR *I+KFLITYHAS TSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPVTNLFDMPNVFIRYVKQSRYAPAWINNLNF+IDITFGTDVES KSF  IHH+QTPPLT* FKNVIGA  T +I+++YLTPSKC*CN C+HAAIKRGTRL+MI L TQNST* PL FPKLPAHLIFWCYN+Q HM+PNAE* NHFI CVSIF+KLL Y  A KSW+N * TFH+RPYSCLQS T+ A+
Subject   3322  SHGAFFEVTG*S*IKHWIYKPSALQVVPI*LSFEQPQYVTLFGTQNSSIFLRIICALTRITSKRDESVTADNKKT*IDVTRRE*LNFIKDHAMTSL*ACNFPKEDFKGNNIPALLL*FACLHHLTLFIHF*VPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCTKHNCQFSLFDVRS*HSSKPRL*IVKFLITYHASQTSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPVTNLFDMPNVFIRYVKQSRYAPAWINNLNFSIDITFGTDVESLKSFRQIHHIQTPPLT*LFKNVIGAWPTQIIEHVYLTPSKC*CNGCNHAAIKRGTRLKMI*LQTQNST*RPLIFPKLPAHLIFWCYNNQSHMVPNAE*GNHFIFCVSIFTKLLPYGWARKSWINW*FTFHERPYSCLQSQTVGAE  4635

Range 3: 3327 to 4634 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
851.5 bits(1852) 0.0 376/436(86%) 0/436(0%) Minus/Plus
Query        3  HRWSSFEGRNKVVCGK*VNS*PSSFKPNYTEATWRKCLRRE*NDCFILH*ASCEADHYNTRI*GELEVWGK*VAPMWNSVFKVQSFPTLCPS*WLHDHSYCISTWKA*GRGS*LLM*TQHQSHF*RTMSRGGSEHDVFSRSF*SFRHLCQM*CQW*N*GY*SRRAHICSV*HNE*TH*ACRKDW*RASKYKGG*AAKS*TISS*PAFFERVKDNIFSKF*AGGKTSGVLAGRFNWRDK**EI**FKTLACWSVYF*HQTKRIDSRAWHIWGWKEFPIQELHEEI*RKICNICLT*AGSSKFNQKGPGNG**V*GGEGRQIKEGGLGCRYL*SLS*KSYRPKGWSLRDL**SSAIPPWLH*SMSSCYSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEAGRRKVI*VQLGESEVRKSNV*FKITL*LQKRLHD  1310
                HR   FEGRNKVV GK*+ S* SSF PN+TEATW KCLRR+*NDC IL *A CE D+YNTRI*GELEVWGK*VA MWN VF+V+SF  LCPS*WLHD+S+CISTWKA*GR + L +* +HQSHF*R MS GGSE+DVF  SF* FRHLCQM*CQW N*GY*SRRAHICSV*HNE*TH*ACRKDW*RASKYKGG*AAKS*TISS*PAF ERVKDNIFSKF* GGKTSGVLAGRF+WRDK**EI* FK LACWSV F*HQTKRIDS AW+IWGWKEFPIQELHEEI*RKICNICLT*AGSSKFNQKGP NG* V*GGEGRQIKEGGLGC YL*SL *+SYRPKGWSLRDL**SSAIP WLH SMSSCY Q*RFHLSCW*SLSKHI*FSKR*SYFGC TE*HIE  RRKVI*VQLGE +V KSNV*FKITL*LQKRLHD
Subject   3327  HRRFGFEGRNKVVRGK*ITS*SSSFGPNHTEATW*KCLRRK*NDCLILR*APCETDYYNTRI*GELEVWGK*VASMWNFVFEVKSFSALCPS*WLHDYSHCISTWKA*GRRAQLFV*AKHQSHF*RAMSGGGSEYDVFGGSF*GFRHLCQM*CQWRN*GY*SRRAHICSV*HNE*TH*ACRKDW*RASKYKGG*AAKS*TISS*PAFSERVKDNIFSKF*EGGKTSGVLAGRFDWRDK**EI*RFKALACWSVNF*HQTKRIDSCAWYIWGWKEFPIQELHEEI*RKICNICLT*AGSSKFNQKGPRNG*RV*GGEGRQIKEGGLGCCYL*SLP*ESYRPKGWSLRDL**SSAIPSWLHRSMSSCYPQ*RFHLSCW*SLSKHI*FSKR*SYFGCRTE*HIEVARRKVI*VQLGEPKVCKSNV*FKITL*LQKRLHD  4634

Range 4: 3462 to 4634 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
814.4 bits(1771) 0.0 377/391(96%) 0/391(0%) Plus/Minus
Query        3  VMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSTSLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHXXXXXXXXXXEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSARSKLGKYVIFDPFKESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQMXXXXXXXXXYIMFRPPP*HSSSKM*LVLGLHK*LRTSTSRLPSADAIAVIMQPLRGAQGWK*LDFKHRIPHRGHSLSPNFQLTSYSGVIMISLT*CLMQNK  1175
                VMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPS++LNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHSSSISRSLLIEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSA SKLGKYVIFDPF+ESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQMSKASKASAKYI+FRPPP*HSSSKM*LVLGLHK*L TSTSRLPSADA+AVIMQPLRGAQG K* DFKH+IPHRGHS SPNFQLTSYSGVI+ISLT CL QNK
Subject   3462  VMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSNLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHSSSISRSLLIEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSALSKLGKYVIFDPFRESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQMSKASKASAKYIIFRPPP*HSSSKM*LVLGLHK*LSTSTSRLPSADAMAVIMQPLRGAQG*K*FDFKHKIPHRGHSFSPNFQLTSYSGVIIISLTWCLTQNK  4634

Range 5: 3321 to 3401 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.3 bits(121) 0.0 25/27(93%) 0/27(0%) Plus/Minus
Query     1236  ERAGSTVDSLSTNDLIPAFKARPSVLR  1316
                ERAGST DSLSTNDLIPAFKA+PSVLR
Subject   3321  ERAGSTGDSLSTNDLIPAFKAKPSVLR  3401

Range 6: 3323 to 4636 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
843.7 bits(1835) 0.0 379/438(87%) 0/438(0%) Plus/Minus
Query        1  QSWSLF*SYRVILNQTLDLRTSDSPSCTYMTFLRPASICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDQCNQGGIAELHQRSRNDQPLGL*LF*ERLQR*RHPNPPSLICLPSPPYTHHPFPGPF*LNLLEPA*VRQMLQIFLQIXXXXXCIGNSFQPQMCQARLSILFV*CQK*TLQQAKVLNH*ISHHLSRQLNLPASTPEVFPPAQNLENMLSLTRSKKAGQELIV*LFAAHPPLYFEARYQSFRHA*CVHSLCQTEQICARLD**PQFXXXXXIWHRCRKLQKLLLNTSCSDPPLDIVLQKCDWCWVYISN*EPLPHAFQVLMQ*L*SCSH*EGHKVGNDWTLNTEFHIGATHFPQTSSSPHILVL**SASHDA*CRIKQSFHSLRKHFLQVASV*LGLKELGQLLTHFPQTTLFLPSKLDHLC*  1314
                QSWSLF*SYRVILNQTLDL+T  SPSCTYMTFLR  SICHSV+HPK*LYLFENHMCFDKDHQQER*KRHC *QEDID+CNQ GIAELHQRSRNDQPLGL*L * RLQR*+HP+PPSLICLPSPPYT HPF GPF*LNLLEPA*VRQMLQIFLQISS*SSCIGNSFQPQM QA+LSILFV*CQK TLQQAK LN *ISHHLSRQ NLPASTPEVFPP+QNLENMLSLTRS+KAGQELIV*LFAAHPPLYFEARYQSFRHA*CVHSLCQTEQICARLD**PQF H*HHIWHRCRK QKL  NTS SDPP DI LQKCDWC  Y +N*  LPHAFQVLMQ L*SCSH*EGHK  ND T NT+FHI ATHFPQTSSSPHILVL**S SH A* RI+QSFH LRKHF QVASV LG KEL QL+ HFP+TTLFLPSK +  C*
Subject   3323  QSWSLF*SYRVILNQTLDLQTFGSPSCTYMTFLRATSICHSVRHPK*LYLFENHMCFDKDHQQER*KRHCG*QEDIDRCNQEGIAELHQRSRNDQPLGL*LS*GRLQR*QHPSPPSLICLPSPPYTLHPFLGPF*LNLLEPA*VRQMLQIFLQISS*SSCIGNSFQPQMYQAQLSILFV*CQKLTLQQAKALNR*ISHHLSRQSNLPASTPEVFPPSQNLENMLSLTRSEKAGQELIV*LFAAHPPLYFEARYQSFRHA*CVHSLCQTEQICARLD**PQFLH*HHIWHRCRKPQKLPPNTSYSDPPPDIALQKCDWCLAYTNN*ARLPHAFQVLMQWL*SCSH*EGHKAENDLTSNTKFHIEATHFPQTSSSPHILVL**SVSHGA*RRIRQSFHFLRKHFHQVASVWLGPKELDQLVIHFPRTTLFLPSKPNRRC*  4636

Range 7: 3326 to 4189 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
512.4 bits(1112) 0.0 244/288(85%) 0/288(0%) Minus/Plus
Query      448  AQMV*L*RQE*GRLWKVSQQLTQLFQA*LYRSNLEKMLTQRMK*LLYSALGIM*G*SL*HQNMR*AGSLGKVSGPYVEFCV*SPIISNLVPLLMAA*SQLLHQHLEGVR*RFLITYVDPAPITFLKNYVKGGV*T*CI*QKLLKLSTSVPNVMSMVKLRLLIQAGAYLLCLT*RMNTLGMSKRLVTGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLSGRKNFRGACWEV*LA**VMRNLMIQNLGLLECLLLTSNKEN*QSCLAHLGLERVSYTRAS*RDLKEN  1311
                A  V L*RQE*GR WKV+ QL QLF+A  Y SNL KMLTQ+MK*L YSALG M* * L*HQNMR*AGSLGK+SG YVEFCV*S II +LVPLLMAA* Q LHQHLEGVR*   I  V  APITFLK+YV+GGV* *CI +KLL+LSTSVPNVMSM KLRLLIQAGAYLLCLT*RMNTLGMSKRLVTGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVL GRKNFRGACWEV*LA**VMRNL IQ+LGLLEC LLTSNKEN*Q CL HLGLERVSYTRAS*RDLKEN
Subject   3326  APTVWL*RQE*GRSWKVNHQLIQLFRAQPYGSNLVKMLTQKMK*LPYSALGTM*D*LL*HQNMR*AGSLGKMSGLYVEFCV*SQIIFSLVPLLMAA*LQPLHQHLEGVR*TCSIICVGQAPITFLKSYVRGGV*I*CIWRKLLRLSTSVPNVMSMEKLRLLIQAGAYLLCLT*RMNTLGMSKRLVTGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLRGRKNFRGACWEV*LA**VMRNLTIQSLGLLECQLLTSNKEN*QLCLVHLGLERVSYTRAS*RDLKEN  4189

Range 8: 4466 to 4636 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
121.1 bits(258) 0.0 52/57(91%) 0/57(0%) Minus/Plus
Query        1  KAHMILKKIELFWVLNRVTY*GWSKESHIGTTWRVGGS*IQCLIQDYPVTSKKAP*L  171
                KAHMILKKIELFWV NRVTY*G SKESHIGTTWR  G *IQCLIQDYPVTSKKAP*L
Subject   4466  KAHMILKKIELFWVPNRVTY*GCSKESHIGTTWRAEGL*IQCLIQDYPVTSKKAP*L  4636

Range 9: 4223 to 4411 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
116.1 bits(247) 0.0 55/63(87%) 0/63(0%) Minus/Plus
Query      226  QIQSKGTWKWMMSVRW*RQANQRRRVGMSLPLKSFLEKLQA*RLVIA*SLMKFSYSPLVTLIY  414
                QIQSKGT KWM SVRW*RQANQRRR GM LPLKS L KLQA*RLVIA*SLMKFSYS LVT IY
Subject   4223  QIQSKGT*KWMKSVRW*RQANQRRRAGMLLPLKSSLGKLQA*RLVIA*SLMKFSYSLLVTSIY  4411

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 9

Range 1: 3322 to 4635 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1027.5 bits(2236) 0.0 428/438(98%) 0/438(0%) Minus/Plus
Query        2  LSTDGLALKAGIRSFVESESTVDPALSSLTIQKQLGENAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVEVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLVEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMT  1315
                LSTDGLALKAGIRSFVESES VDPALS+ TI+KQLGENAYAENEMIALFC+RHHVRLIIITPEYEVSWKFGE+EWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREV+VLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTS IKQRELTVVLGTFGAGKSFL+KSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRL+EGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMT
Subject   3322  LSTDGLALKAGIRSFVESESPVDPALSNPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSGIKQRELTVVLGTFGAGKSFLHKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMT  4635

Range 2: 3322 to 4635 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
896.9 bits(1951) 0.0 389/438(89%) 0/438(0%) Plus/Minus
Query        2  SHGAFFEVTG*S*IKHWIYEPPTLQVVPI*LSFDQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*INVTRGE*LNFIKDHAMTSL*ACNFSKKDFKGNDIPTLLL*FACLHHLTLIIHFQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCAKHDCQFSLFDVRSRHSSKPRF*IIKFLITYHAS*TSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPVTNLFDMPNVFIRYVKQSRYAPAWINNLNFTIDITFGTDVESFKSFC*IHHVQTPPLT*FFKNVIGAGST*VIKNLYLTPSKC*CNSCDHAAIKRGTRLEMIGL*TQNST*GPLTFPKLPAHLIFWCYNDQPHMMPNAE*SNHFILCVSIFXXXXXXXXXXXXWVNC*LTFHKRPYSCLQS*TICAK  1315
                SHG  FEVTG*S*IKHWIYEPP LQVVPI*L F+QPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTAN+KKT*I+VTRGE*L+FIKDHAMTSL*ACNF KKDFKGNDIP LLL*FACLH+LTLIIHFQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCAKHDCQFSLFD RSRHSSKPR *I+KFLITYHAS*TSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPVTNLFDMPNVFIRYVK+SRYAPAWI+N NFTIDITF TDVES K FC IHH+QTPPLT* FK+VIGAG T*VI+++YLTPSKC*CNSC+HAAIKRGTRL+MIGL*TQNST* P   PKLPAH IFW YNDQ HMMPN E* NHFI C+SIF+KLL YS  *KSW+N * TFHKRPYS LQS*TICAK
Subject   3322  SHGPLFEVTG*S*IKHWIYEPPALQVVPI*LPFEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANDKKT*IDVTRGE*LDFIKDHAMTSL*ACNFPKKDFKGNDIPALLL*FACLHYLTLIIHFQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCAKHDCQFSLFDARSRHSSKPRL*IVKFLITYHAS*TSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPVTNLFDMPNVFIRYVKKSRYAPAWIDNFNFTIDITFSTDVESLKRFCQIHHIQTPPLT*LFKDVIGAGPT*VIEHVYLTPSKC*CNSCNHAAIKRGTRLKMIGL*TQNST*RPFILPKLPAHFIFWRYNDQSHMMPNTE*GNHFIFCISIFTKLLPYSWV*KSWINR*FTFHKRPYSRLQS*TICAK  4635

Range 3: 3321 to 4634 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
895.5 bits(1948) 0.0 391/438(89%) 0/438(0%) Minus/Plus
Query        3  S*HRWSSFEGRNKVVCGK*VNS*PSSFKPNYTEATWRKCLRRE*NDCFILH*ASCEADHYNTRI*GELEVWGK*VAPMWNSVFKVQSFPTLCPS*WLHDHSYCISTWKA*GRGS*LLM*TQHQSHF*RTMSRGGSEHDVFSRSF*SFRHLCQM*CQW*N*GY*SRRAHICSV*HNE*TH*ACRKDW*RASKYKGG*AAKS*TISS*PAFFERVKDNIFSKF*AGGKTSGVLAGRFNWRDK**EI**FKTLACWSVYF*HQTKRIDSRAWHIWGWKEFPIQELHEEI*RKICNICLT*AGSSKFNQKGPGNG**V*GGEGRQIKEGGLGCRYL*SLS*KSYRPKGWSLRDL**SSAIPPWLH*SMSSCYSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEAGRRKVI*VQLGESEVRKSNV*FKITL*LQKRLHD  1316
                S*HRWSSFEG NKVVCGK*+  * SSFKPNYTEATW KCL R+*NDC IL *ASCE DHYN RI* ELEVWG+*+A MWN VFKVQSF TLCPS*WLHD+SYCISTWKA*GR + LLM* QHQSH *R MSRGGSE+DVF RS * FRHLC M*CQW*N* Y SRRAHICS *HNE*TH*ACRKDW*RASKYKGG*AAKS*TISS*PAFFERVKDNIFSKF*AGGKTSGVLAGRFNWRDK**EI* FK LACWSVYF HQTKRIDSRAWHIWGWKEFP QELHEEI*RKICNICLT*AGSSKFNQKGPGNG**V*G EGRQIKEGGLGCRYL*SLS*+SYRPKGWSLRDL**S AIPPWLH SMSSC+SQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEA RR+VI*VQLGE EVRKSNV*FKITL*LQK +HD
Subject   3321  S*HRWSSFEGGNKVVCGK*ITG*SSSFKPNYTEATW*KCLCRK*NDCLILC*ASCETDHYNARI*SELEVWGE*MASMWNFVFKVQSFSTLCPS*WLHDYSYCISTWKA*GRRAQLLM*AQHQSHL*RAMSRGGSEYDVFGRSV*GFRHLC*M*CQW*N*SYQSRRAHICSF*HNE*TH*ACRKDW*RASKYKGG*AAKS*TISS*PAFFERVKDNIFSKF*AGGKTSGVLAGRFNWRDK**EI*RFKALACWSVYFWHQTKRIDSRAWHIWGWKEFPTQELHEEI*RKICNICLT*AGSSKFNQKGPGNG**V*GSEGRQIKEGGLGCRYL*SLS*ESYRPKGWSLRDL**SPAIPPWLHRSMSSCHSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEAARREVI*VQLGEPEVRKSNV*FKITL*LQKGVHD  4634

Range 4: 3323 to 4636 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
883.6 bits(1922) 0.0 395/438(90%) 0/438(0%) Plus/Minus
Query        1  QSWSLF*SYRVILNQTLDLRTSDSPSCTYMTFLRPASICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDQCNQGGIAELHQRSRNDQPLGL*LF*ERLQR*RHPNPPSLICLPSPPYTHHPFPGPF*LNLLEPA*VRQMLQIFLQIXXXXXCIGNSFQPQMCQARLSILFV*CQK*TLQQAKVLNH*ISHHLSRQLNLPASTPEVFPPAQNLENMLSLTRSKKAGQELIV*LFAAHPPLYFEARYQSFRHA*CVHSLCQTEQICARLD**PQFXXXXXIWHRCRKLQKLLLNTSCSDPPLDIVLQKCDWCWVYISN*EPLPHAFQVLMQ*L*SCSH*EGHKVGNDWTLNTEFHIGATHFPQTSSSPHILVL**SASHDA*CRIKQSFHSLRKHFLQVASV*LGLKELGQLLTHFPQTTLFLPSKLDHLC*  1314
                QSW+ F*SYRVILNQTLDLRTS SPSCTYMT LR ASICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDID+CNQGGIA LHQRSRNDQPLGL*L *ERLQR*RHP+PPSLICLPS PYTHHPFPGPF*LNLLEPA*VRQMLQIFLQISS*SSC+GNSFQPQMCQARLSILFV*CQK*TLQQAK LN *ISHHLSRQLNLPASTPEVFPPAQNLENMLSLTRSKKAGQELIV*LFAAHPPLYFEARYQSFRHA*CVHSLCQ EQICARLD** QFHH*HHI HRCRK Q LL NTS SDPPLDI LQ+CDWCW YISN*  LPHAFQVLMQ*L*SCSH*EGHKV NDWTLNT+FHI A H PQTSSS HIL L**S SHDA* RI+QSFH L KHF QVASV*LGLKEL Q + HFPQTTLF PSKLDHLC*
Subject   3323  QSWTPF*SYRVILNQTLDLRTSGSPSCTYMTSLRAASICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQGGIAGLHQRSRNDQPLGL*LS*ERLQR*RHPSPPSLICLPSLPYTHHPFPGPF*LNLLEPA*VRQMLQIFLQISS*SSCVGNSFQPQMCQARLSILFV*CQK*TLQQAKALNR*ISHHLSRQLNLPASTPEVFPPAQNLENMLSLTRSKKAGQELIV*LFAAHPPLYFEARYQSFRHA*CVHSLCQKEQICARLD**LQFHH*HHI*HRCRKPQTLLPNTSYSDPPLDIALQRCDWCWAYISN*ARLPHAFQVLMQ*L*SCSH*EGHKVENDWTLNTKFHIEAIHSPQTSSSLHILAL**SVSHDA*HRIRQSFHFLHKHFHQVASV*LGLKELDQPVIHFPQTTLFPPSKLDHLC*  4636

Range 5: 3462 to 4634 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
813.5 bits(1769) 0.0 377/391(96%) 0/391(0%) Plus/Minus
Query        3  VMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSTSLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHXXXXXXXXXXEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSARSKLGKYVIFDPFKESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQMXXXXXXXXXYIMFRPPP*HSSSKM*LVLGLHK*LRTSTSRLPSADAIAVIMQPLRGAQGWK*LDFKHRIPHRGHSLSPNFQLTSYSGVIMISLT*CLMQNK  1175
                VM+PFLKLQGNLESNIGFTNLRLSKLYLYDFPS+SLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLR+TRRHRSM*PGGNS TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHSSSISRSLLIEFARARLGETNVTNFPSDLFMKLL RKLFPAPNVPSTTVNSLCLM EVDTPASQGFESLNFSSLITPVKPPSKHP*SFSARSKLGKYVIFDPFKESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMS RADMRPPGLITSISPLTSHLAQMSKAS ASAKYI+FRPPP*HSSSKM*LVLGLHK*L TSTSRLPSADAIAVIMQPLRGAQG K*LDFKH+IPHRGHS SPNFQLTSYSGVIMISLT*CL QNK
Subject   3462  VMDPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSSLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRMTRRHRSM*PGGNSWTSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHSSSISRSLLIEFARARLGETNVTNFPSDLFMKLLCRKLFPAPNVPSTTVNSLCLMPEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSARSKLGKYVIFDPFKESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSKRADMRPPGLITSISPLTSHLAQMSKASNASAKYIIFRPPP*HSSSKM*LVLGLHK*LSTSTSRLPSADAIAVIMQPLRGAQG*K*LDFKHKIPHRGHSFSPNFQLTSYSGVIMISLT*CLTQNK  4634

Range 6: 3321 to 3410 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
60.6 bits(126) 0.0 27/30(90%) 0/30(0%) Plus/Minus
Query     1227  VRLERAGSTVDSLSTNDLIPAFKARPSVLR  1316
                V  ERAGST DSLSTNDLIPAFKARPSVLR
Subject   3321  VGFERAGSTGDSLSTNDLIPAFKARPSVLR  3410

Range 7: 3323 to 4189 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
529.8 bits(1150) 0.0 250/289(87%) 0/289(0%) Minus/Plus
Query      448  LAQMV*L*RQE*GRLWKVSQQLTQLFQA*LYRSNLEKMLTQRMK*LLYSALGIM*G*SL*HQNMR*AGSLGKVSGPYVEFCV*SPIISNLVPLLMAA*SQLLHQHLEGVR*RFLITYVDPAPITFLKNYVKGGV*T*CI*QKLLKLSTSVPNVMSMVKLRLLIQAGAYLLCLT*RMNTLGMSKRLVTGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLSGRKNFRGACWEV*LA**VMRNLMIQNLGLLECLLLTSNKEN*QSCLAHLGLERVSYTRAS*RDLKEN  1314
                LAQMV*L*R+E*GRLWKV+ +L QLFQ  LY SNL KML Q+MK*L YS LGIM* *SL* QNM+*AGSLG+++G YVEFCV*SPII NLVPLLMAA* QLLHQHLEGVR*   ITYV PAPIT LK+YVKGGV* *CI QK L+LSTSV NVMSMVKL+L IQAGAYLL LT*RMNTLGMSKRLVTGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLSGRKNFRGACWEV*LA**VMRNL IQ+LGLLECLLL SNKEN*QSCLAHLGLERVSYTRAS*RDLKEN
Subject   3323  LAQMV*L*RRE*GRLWKVNHRLIQLFQTQLYGSNLVKMLMQKMK*LPYSVLGIM*D*SL*RQNMK*AGSLGRMNGLYVEFCV*SPIIFNLVPLLMAA*LQLLHQHLEGVR*TCSITYVGPAPITSLKSYVKGGV*I*CIWQKRLRLSTSVLNVMSMVKLKLSIQAGAYLLFLT*RMNTLGMSKRLVTGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLSGRKNFRGACWEV*LA**VMRNLTIQSLGLLECLLLASNKEN*QSCLAHLGLERVSYTRAS*RDLKEN  4189

Range 8: 4223 to 4411 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
126.2 bits(269) 0.0 58/63(92%) 0/63(0%) Minus/Plus
Query      226  QIQSKGTWKWMMSVRW*RQANQRRRVGMSLPLKSFLEKLQA*RLVIA*SLMKFSYSPLVTLIY  414
                QIQSKGTWKWMMSVR *RQANQRRR GMSLPLKSFL KLQA*RLVIA*SLMK SYSPLVT IY
Subject   4223  QIQSKGTWKWMMSVR**RQANQRRRAGMSLPLKSFLGKLQA*RLVIA*SLMKSSYSPLVTSIY  4411

Range 9: 4466 to 4636 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
124.3 bits(265) 0.0 52/57(91%) 0/57(0%) Minus/Plus
Query        1  KAHMILKKIELFWVLNRVTY*GWSKESHIGTTWRVGGS*IQCLIQDYPVTSKKAP*L  171
                KAHMILKKIELFWVLNRVTY*G SK SHIGTTWR GGS*IQCLIQDYPVTSK+ P*L
Subject   4466  KAHMILKKIELFWVLNRVTY*GCSKGSHIGTTWRAGGS*IQCLIQDYPVTSKRGP*L  4636

Grapevine rupestris stem pitting associated virus isolate Tannat Rspav1, complete genome

Sequence ID: KR528585.1 Length: 8595 Number of Matches: 9

Range 1: 3304 to 4617 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1004.5 bits(2186) 0.0 418/438(95%) 0/438(0%) Minus/Plus
Query        2  LSTDGLALKAGIRSFVESESTVDPALSSLTIQKQLGENAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVEVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLVEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMT  1315
                LSTDGLALKAGIRSFVESE  V+P LS+  I KQL ENAYAENEMIALFCIRHHVRLI+ITPEYEVSWKFGE EWPLCGILCLKS+HFQPCAPLNGCMITAIASALGRREV+VLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCD+NGEIEVINP G+ISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDS+PWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMD+ CKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRL+EGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMT
Subject   3304  LSTDGLALKAGIRSFVESERLVNPDLSAPAISKQLEENAYAENEMIALFCIRHHVRLIVITPEYEVSWKFGEGEWPLCGILCLKSSHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPRGKISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSRPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEGCKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMT  4617

Range 2: 3447 to 4616 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
770.4 bits(1675) 0.0 357/390(92%) 0/390(0%) Plus/Minus
Query        3  VMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSTSLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHXXXXXXXXXXEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSARSKLGKYVIFDPFKESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQMXXXXXXXXXYIMFRPPP*HSSSKM*LVLGLHK*LRTSTSRLPSADAIAVIMQPLRGAQGWK*LDFKHRIPHRGHSLSPNFQLTSYSGVIMISLT*CLMQN  1172
                VMEPFLKLQG+LESNIGFTNLRLSKLYLYDFPS+SLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLH SSISRSLLIEFA+ARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQG ESLNFSSLITPV+PPSKHP*SFSARSKLGKYVIFDPFKESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCS VMSN A++ P GLITSISP  SHLAQMSKASKASAKYIM RPPP* SSSK+*LVLGLH+*  TSTSRLPSA+A+AVIMQP  GA GWK*LD + RIPHRGHS SPNFQLTSYSGVI ISLT C +QN
Subject   3447  VMEPFLKLQGSLESNIGFTNLRLSKLYLYDFPSSSLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHPSSISRSLLIEFAKARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGLESLNFSSLITPVRPPSKHP*SFSARSKLGKYVIFDPFKESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSLVMSNNAEILPRGLITSISPFISHLAQMSKASKASAKYIMLRPPP*QSSSKI*LVLGLHR*FNTSTSRLPSAEAMAVIMQPFNGAHGWK*LDLRQRIPHRGHSPSPNFQLTSYSGVITISLTWCRIQN  4616

Range 3: 3306 to 3383 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.5 bits(82) 0.0 18/26(69%) 0/26(0%) Plus/Minus
Query     1236  ERAGSTVDSLSTNDLIPAFKARPSVL  1313
                ER+G T  SLST D IPAF+A PSVL
Subject   3306  ERSGFTKRSLSTKDRIPAFRASPSVL  3383

Range 4: 3304 to 4617 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
722.3 bits(1570) 0.0 324/438(74%) 0/438(0%) Plus/Minus
Query        2  SHGAFFEVTG*S*IKHWIYEPPTLQVVPI*LSFDQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*INVTRGE*LNFIKDHAMTSL*ACNFSKKDFKGNDIPTLLL*FACLHHLTLIIHFQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCAKHDCQFSLFDVRSRHSSKPRF*IIKFLITYHAS*TSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPVTNLFDMPNVFIRYVKQSRYAPAWINNLNFTIDITFGTDVESFKSFC*IHHVQTPPLT*FFKNVIGAGST*VIKNLYLTPSKC*CNSCDHAAIKRGTRLEMIGL*TQNST*GPLTFPKLPAHLIFWCYNDQPHMMPNAE*SNHFILCVSIFXXXXXXXXXXXXWVNC*LTFHKRPYSCLQS*TICAK  1315
                SHGAFFEVTG*S*IKH IYEPP LQVVPI*L F+QPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*I+VTRGE*LNFIKDHAMTSL*ACNF KK+FKG++IP LLL*FACLHHLT +IH QVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKC K++CQFSLF+V S HSSKPR *IIKFL+ YH S*TSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIH YTLRP+TNLFDMP V I YVKQ R     IN+ N +I ITF  +V+  KSF *IHHV+TP LT   KN+I AGST +I ++  TPSKC* N CDHA I+ GT LE+     +NS  GP TFPK P   IFWC   QPHM+PN +* NH IL +SI  +L      *K W+   LT HKR  + LQ  +I A+
Subject   3304  SHGAFFEVTG*S*IKHRIYEPPALQVVPI*LPFEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*IDVTRGE*LNFIKDHAMTSL*ACNFPKKNFKGDNIPALLL*FACLHHLTPLIHLQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCTKYNCQFSLFNVGS*HSSKPRP*IIKFLVAYHTS*TSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHFYTLRPITNLFDMPYVLISYVKQCRNFTTRINHFNLSIYITFSANVKGLKSFS*IHHVKTPSLTKLLKNMISAGSTQII*HINFTPSKC*SNGCDHATIQWGTWLEVT*FKAKNSAQGPFTFPKFPTDFIFWCDYYQPHMVPNTK*CNHLILGISILFQLFRNGWG*KIWIYQALTLHKRSNTGLQGKSISAE  4617

Range 5: 3309 to 4616 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
697.1 bits(1515) 0.0 323/436(74%) 0/436(0%) Minus/Plus
Query        3  HRWSSFEGRNKVVCGK*VNS*PSSFKPNYTEATWRKCLRRE*NDCFILH*ASCEADHYNTRI*GELEVWGK*VAPMWNSVFKVQSFPTLCPS*WLHDHSYCISTWKA*GRGS*LLM*TQHQSHF*RTMSRGGSEHDVFSRSF*SFRHLCQM*CQW*N*GY*SRRAHICSV*HNE*TH*ACRKDW*RASKYKGG*AAKS*TISS*PAFFERVKDNIFSKF*AGGKTSGVLAGRFNWRDK**EI**FKTLACWSVYF*HQTKRIDSRAWHIWGWKEFPIQELHEEI*RKICNICLT*AGSSKFNQKGPGNG**V*GGEGRQIKEGGLGCRYL*SLS*KSYRPKGWSLRDL**SSAIPPWLH*SMSSCYSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEAGRRKVI*VQLGESEVRKSNV*FKITL*LQKRLHD  1310
                H W+  EGR  + CG+*      SF P++     R+CL RE*+DC IL+ A CEAD  +TRI* +LE+WG+*+AP+ NS+  ++S PT+CP  WLHDHS+C STWKA*     L +*TQH S+F*  +S  GS HDVFS SF*   HL  M* +W +*  *S   + C V*HN * H ACRKDW* ASKYK G*AAKS*TISS*PAFFERVKDNIFSKF*AGGKTSGVLAGR NW DK  EI**FK LACWSV F H TKRIDS  W+IWGWKEFPIQELHEEI*RKICNICLT*AG SKFNQKGPG+G* V*GGEGRQIKEGGLGC +L*S S*+SYRPKGWSLRDL**SSAIPPWLH SMSSCYSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEA RR+VI*VQLGE EVRKS+V*FK TL*LQKRLHD
Subject   3309  H*WTCPEGRYSIFCGE*ALGKSRSFSPSHF*TIGRECLCRE*DDCIILYSAPCEADSNHTRI*SQLEIWGR*MAPVRNSLP*IKSLPTMCPIEWLHDHSHCFSTWKA*S*CVKLSV*TQH*SYF*GALSGRGS*HDVFS*SF*GL*HLR*M*YKWRD*SD*SAW*NFCIV*HN**AHKACRKDW*WASKYKSG*AAKS*TISS*PAFFERVKDNIFSKF*AGGKTSGVLAGRSNWCDKRREI**FKALACWSVNFRH*TKRIDSCTWYIWGWKEFPIQELHEEI*RKICNICLT*AGFSKFNQKGPGDG*GV*GGEGRQIKEGGLGCCHL*SFS*ESYRPKGWSLRDL**SSAIPPWLHRSMSSCYSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEAARREVI*VQLGEPEVRKSDV*FKTTL*LQKRLHD  4616

Range 6: 3305 to 4618 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
682.9 bits(1484) 0.0 322/438(74%) 0/438(0%) Plus/Minus
Query        1  QSWSLF*SYRVILNQTLDLRTSDSPSCTYMTFLRPASICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDQCNQGGIAELHQRSRNDQPLGL*LF*ERLQR*RHPNPPSLICLPSPPYTHHPFPGPF*LNLLEPA*VRQMLQIFLQIXXXXXCIGNSFQPQMCQARLSILFV*CQK*TLQQAKVLNH*ISHHLSRQLNLPASTPEVFPPAQNLENMLSLTRSKKAGQELIV*LFAAHPPLYFEARYQSFRHA*CVHSLCQTEQICARLD**PQFXXXXXIWHRCRKLQKLLLNTSCSDPPLDIVLQKCDWCWVYISN*EPLPHAFQVLMQ*L*SCSH*EGHKVGNDWTLNTEFHIGATHFPQTSSSPHILVL**SASHDA*CRIKQSFHSLRKHFLQVASV*LGLKELGQLLTHFPQTTLFLPSKLDHLC*  1314
                QSWSLF*SYRV+LNQT DLRTS SPSCTYMT LR ASICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDID+CNQGGIAELHQRSRNDQPLGL*L *E+LQR*+HP+PPSLICLPSPPYT HP PGPF*LNLL+PA*VRQMLQIFLQISS*SSCIGNSFQPQM Q +LSILFV*C+K TLQQAK LNH*IS  LS QL+LPASTPEVFPPAQNLENMLSLTRSKKAGQELIV*LFAAHP LYFEA YQSFRHA C H LCQT Q     D*  Q  H +HI  +C++ QKL LNTSC DP  D   QK D CWVY  N     HAFQVL Q L*SC+H  GH VG+D     EF  GA H PQ S+  HILV   SASH A  +I QS HS  KH L +    LGLK+L     H PQ   + PS   H C*
Subject   3305  QSWSLF*SYRVVLNQTSDLRTSGSPSCTYMTSLRAASICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQGGIAELHQRSRNDQPLGL*LS*EKLQR*QHPSPPSLICLPSPPYTPHPSPGPF*LNLLKPA*VRQMLQIFLQISS*SSCIGNSFQPQMYQVQLSILFV*CRKLTLQQAKALNH*ISRRLSHQLDLPASTPEVFPPAQNLENMLSLTRSKKAGQELIV*LFAAHPLLYFEAHYQSFRHALCAH*LCQTMQKFYHAD*SLQSLHLYHI*RKCQRPQKLQLNTSC*DPLPDKAPQKYD*CWVYTDNLTHQLHAFQVLKQWL*SCNHSMGHMVGSDLI*GKEFRTGAIHLPQISN*LHILV*LLSASHGAEYKIMQSSHSRHKHSLPIV*KWLGLKDLDLPSAHSPQKIEYRPSGQVHQC*  4618

Range 7: 3347 to 4171 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
359.8 bits(779) 0.0 180/275(65%) 0/275(0%) Minus/Plus
Query      448  LWKVSQQLTQLFQA*LYRSNLEKMLTQRMK*LLYSALGIM*G*SL*HQNMR*AGSLGKVSGPYVEFCV*SPIISNLVPLLMAA*SQLLHQHLEGVR*RFLITYVDPAPITFLKNYVKGGV*T*CI*QKLLKLSTSVPNVMSMVKLRLLIQAGAYLLCLT*RMNTLGMSKRLVTGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLSGRKNFRGACWEV*LA**VMRNLMIQNLGLLECLLLTSNKEN*QSCLAHLGLERVSYTRAS*RDLKEN  1272
                LW+VS    Q+FQ   + +N ++ML  RM+*L Y   G M*G*   HQNM+  G+LGKV+GP  EF   + + SN VP  M A*SQ L QHLEGV+    I  VDPA I FL+++V+ GV T*CI* KLL+  T   NV+ M +L+ LI+   +L CLT* M+T GMSKRLV GLKV*+WMSCEKLNDQLLTCFL*TGQR*HIFQVLSGRKNFRGACWEV*L **  RNLMIQ LGLLEC L T NKEN*Q  L HLGLERVSYTRAS*RDLKEN
Subject   3347  LWRVSAW*IQIFQPQPFLNNWKRMLMPRMR*LHYFVFGTM*G***SHQNMKSVGNLGKVNGPCAEFFALNQVTSNHVPH*MVA*SQPLLQHLEGVKLMC*IICVDPALIIFLRSFVREGVLT*CI*LKLLRPLTFALNVI*MERLK*LIRVVKFLHCLT*LMST*GMSKRLVMGLKV*KWMSCEKLNDQLLTCFL*TGQR*HIFQVLSGRKNFRGACWEV*LV**ATRNLMIQGLGLLECQLPTLNKEN*QLYLVHLGLERVSYTRAS*RDLKEN  4171

Range 8: 4448 to 4618 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
125.7 bits(268) 0.0 53/57(93%) 0/57(0%) Minus/Plus
Query        1  KAHMILKKIELFWVLNRVTY*GWSKESHIGTTWRVGGS*IQCLIQDYPVTSKKAP*L  171
                KAHMILKKIELFWVLNRVTY*G SK SHIGTTWR GGS*I+CLIQDYPVTSKKAP*L
Subject   4448  KAHMILKKIELFWVLNRVTY*GCSKGSHIGTTWRAGGS*IRCLIQDYPVTSKKAP*L  4618

Range 9: 4205 to 4393 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
122.5 bits(261) 0.0 54/63(86%) 0/63(0%) Minus/Plus
Query      226  QIQSKGTWKWMMSVRW*RQANQRRRVGMSLPLKSFLEKLQA*RLVIA*SLMKFSYSPLVTLIY  414
                QIQSKGTW+WM  VRW*RQANQRRR GM  PLK FL KLQA*RLVIA*SLMKFSYSPLVT IY
Subject   4205  QIQSKGTWRWMRGVRW*RQANQRRRAGMLSPLKFFLGKLQA*RLVIA*SLMKFSYSPLVTSIY  4393

Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome

Sequence ID: KR054734.1 Length: 8753 Number of Matches: 9

Range 1: 3322 to 4635 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1000.0 bits(2176) 0.0 410/438(94%) 0/438(0%) Minus/Plus
Query        2  LSTDGLALKAGIRSFVESESTVDPALSSLTIQKQLGENAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVEVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLVEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMT  1315
                LSTDGLALKAGIRSFVESES VDP+LS+ T+ +QL +NAYAENEMIALFCIRHHVRLIIITPEYEVSWKFG+SEWPLCGILCL+SNHFQPCAPLNGCMITAIASALGRREV+VLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCD+NGEIEVINPGGR+SALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLS+NGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWL+G+STSDIK RELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDD CKV KAGKSKKEGWDVVTFEVFLRK+  LKAGHCVIFDEVQLFPPGYIDLCLL IRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRL+EGKSYRYN+ESRRFVNPMF+SRLPC+FKKGSMT
Subject   3322  LSTDGLALKAGIRSFVESESLVDPSLSAQTVLRQLSDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPGGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSDIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKIANLKAGHCVIFDEVQLFPPGYIDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMT  4635

Range 2: 3462 to 4634 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
681.5 bits(1481) 0.0 323/391(83%) 0/391(0%) Plus/Minus
Query        3  VMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSTSLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHXXXXXXXXXXEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSARSKLGKYVIFDPFKESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQMXXXXXXXXXYIMFRPPP*HSSSKM*LVLGLHK*LRTSTSRLPSADAIAVIMQPLRGAQGWK*LDFKHRIPHRGHSLSPNFQLTSYSGVIMISLT*CLMQNK  1175
                VMEPFLK  G+L+SNIGFTNLRLS LYL D PS++LN+SLCSAP IA SF ESYVL*QGSPAREMKASLR+  R RS+*PGGNS*TSSK+TQ PAFR   FLR TSKVTTSQPSFFDLPAF TL  SSIS+SLLIEFARA LGET VTN PSDLF+KLLYRKL PAP VPSTTVNS  L+SEVD P S G ESLNFSSLITPVKPPSKHP SFSA SKLGK VIFDPF E RSRADR TF SSSTF+L GPLPIFSTCL+CS VMSNRADMRPPGL+TSISPL SHLAQMS ASKASA+YIMF+PPP*HSSS M* V GLH+*LRTSTSRLPSA+AIAVIMQP  GAQG K* D KH+IPHRGHSLSPNFQLTSYSGVIMISLT*CLMQNK
Subject   3462  VMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVL*QGSPAREMKASLRMVNRQRSI*PGGNS*TSSKMTQWPAFRFAIFLRNTSKVTTSQPSFFDLPAFATLQLSSISKSLLIEFARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLISEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTFLSSSTFMLCGPLPIFSTCLICSLVMSNRADMRPPGLMTSISPLISHLAQMSNASKASARYIMFKPPP*HSSSNM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHRGHSLSPNFQLTSYSGVIMISLT*CLMQNK  4634

Range 3: 3324 to 3401 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.5 bits(82) 0.0 17/26(65%) 0/26(0%) Plus/Minus
Query     1236  ERAGSTVDSLSTNDLIPAFKARPSVL  1313
                ++ GST DSLST + +PAFKA PSVL
Subject   3324  DKDGSTRDSLSTKERMPAFKASPSVL  3401

Range 4: 3322 to 4635 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
509.7 bits(1106) 0.0 235/438(54%) 0/438(0%) Plus/Minus
Query        2  SHGAFFEVTG*S*IKHWIYEPPTLQVVPI*LSFDQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*INVTRGE*LNFIKDHAMTSL*ACNFSKKDFKGNDIPTLLL*FACLHHLTLIIHFQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCAKHDCQFSLFDVRSRHSSKPRF*IIKFLITYHAS*TSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPVTNLFDMPNVFIRYVKQSRYAPAWINNLNFTIDITFGTDVESFKSFC*IHHVQTPPLT*FFKNVIGAGST*VIKNLYLTPSKC*CNSCDHAAIKRGTRLEMIGL*TQNST*GPLTFPKLPAHLIFWCYNDQPHMMPNAE*SNHFILCVSIFXXXXXXXXXXXXWVNC*LTFHKRPYSCLQS*TICAK  1315
                SHGA  E+T  S +KHWI++PPTL VVP+ L+    QY+TL S+Q  +I L +ICALT ITSKR+ES+T+   +T +N+   E LN IK+ AM  L  CNF KK FKG+++PT   *FA L H   IIHFQV F+*IC*SP  *+K Y+F+FR LH+ALV +  +S K AKHDCQ S FD+RS +S +P   I+K LITYH S*   Q PL+ F P KTWK+ YL* +  K+VKS SF+FSQLIHLY LR V NL +M N+ + YVK S +APA +++LN  IDIT   +V+ F+SF  IHHVQT  LT  FK VI  G   V+KN++ T ++   +SCDHAAI  GTRL+MI L   +ST  PL   KLP HLIFW  NDQPHMMPNA+*  HF+LC+SI ++L      *+ W+    TF++R Y+C QS  IC +
Subject   3322  SHGALLEMTWQSGLKHWIHKPPTLNVVPVGLTLK*SQYITLLSSQYCAILLGVICALTGITSKRNESITSYG*QTKVNIAWREQLNLIKNDAMACLQVCNFPKKHFKGHNVPTFFF*FASLCHFATIIHFQVSFN*IC*SPSG*NKGYEFAFRPLHKALVQKAFTSSKGAKHDCQLSRFDIRS*YS*EPWLGIVKLLITYHTS*AP*QTPLQLFSPFKTWKVSYL*SIH*KEVKSRSFHFSQLIHLYALRAVANLLNMSNMLVGYVK*S*HAPARVDDLNLPIDITLSANVKCFESFSEIHHVQTTTLTQLFKYVICGGPAQVVKNIHFTSTERRGDSCDHAAI*WGTRLKMI*LQA*DSTQRPLAISKLPTHLIFWGNNDQPHMMPNAK*GYHFVLCISIITELPQNGLG*QRWIYKRFTFNERTYACFQSKPICTQ  4635

Range 5: 3327 to 4634 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
424.5 bits(920) 0.0 223/436(51%) 0/436(0%) Minus/Plus
Query        3  HRWSSFEGRNKVVCGK*VNS*PSSFKPNYTEATWRKCLRRE*NDCFILH*ASCEADHYNTRI*GELEVWGK*VAPMWNSVFKVQSFPTLCPS*WLHDHSYCISTWKA*GRGS*LLM*TQHQSHF*RTMSRGGSEHDVFSRSF*SFRHLCQM*CQW*N*GY*SRRAHICSV*HNE*TH*ACRKDW*RASKYKGG*AAKS*TISS*PAFFERVKDNIFSKF*AGGKTSGVLAGRFNWRDK**EI**FKTLACWSVYF*HQTKRIDSRAWHIWGWKEFPIQELHEEI*RKICNICLT*AGSSKFNQKGPGNG**V*GGEGRQIKEGGLGCRYL*SLS*KSYRPKGWSLRDL**SSAIPPWLH*SMSSCYSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEAGRRKVI*VQLGESEVRKSNV*FKITL*LQKRLHD  1310
                +RW+ FE R+     K*++       PN  EA    CL RE ND  ILH*ASCEADHY  RI*GELEVW   VA +WN +  V+SF TLCP  WLHDHSY +     *   S*L +   H+SH *R +SR   EHDV   SF S  HL  +* QW +*G+   RAH+ S+*HN+  +* C +DW R +++KGG*A KS TI S*P F E +KDN+ SKF* G K +GV A   NW DK**E+* F+ +A  ++ F*+Q  R+DSRAWH+W W +  +QEL+EE+*R+I N+C T  GSSKFN K  GNG**+  G+G QIK+  LG   L*S+S*++ +P+G  LR  ** S +P  L+* +S  +++* FH SCW*SLSKHI*  K     G * E*+IE     V+ VQ  ESEV +SNV* +  +  Q+ LHD
Subject   3327  YRWACFESRHTFFR*K*ISCRSIFVSPNRFEAAQ**CLCRERNDSLILH*ASCEADHYYPRI*GELEVWR*RVASVWNLMLAVKSFSTLCPIKWLHDHSYRLCAR*T*SGCS*LPVQALHKSHI*RAVSRWWFEHDVSR*SFRSI*HLR*V*YQWGD*GHQPWRAHVSSI*HNQRAY*TC*EDWQRPAEHKGG*AEKSETICS*PPFNEWIKDNLLSKF*KG*KAAGVFARGLNWCDK**EV*RFQAMALRNINF*YQISRVDSRAWHLWSW*KLSVQELYEEV*RQIRNLCFTQKGSSKFN*KRLGNG**LQSGKGWQIKKRRLGRCDL*SVS*ENCKPEGRPLRHF**GSTVPSRLY*PLSVNHTK*CFHFSCW*SLSKHI*LPKGSRNTGS*AE*YIEIT*G*VLQVQH*ESEVCESNV*VQTAMSFQEGLHD  4634

Range 6: 3329 to 4636 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
397.9 bits(862) 0.0 221/436(51%) 0/436(0%) Plus/Minus
Query        1  QSWSLF*SYRVILNQTLDLRTSDSPSCTYMTFLRPASICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDQCNQGGIAELHQRSRNDQPLGL*LF*ERLQR*RHPNPPSLICLPSPPYTHHPFPGPF*LNLLEPA*VRQMLQIFLQIXXXXXCIGNSFQPQMCQARLSILFV*CQK*TLQQAKVLNH*ISHHLSRQLNLPASTPEVFPPAQNLENMLSLTRSKKAGQELIV*LFAAHPPLYFEARYQSFRHA*CVHSLCQTEQICARLD**PQFXXXXXIWHRCRKLQKLLLNTSCSDPPLDIVLQKCDWCWVYISN*EPLPHAFQVLMQ*L*SCSH*EGHKVGNDWTLNTEFHIGATHFPQTSSSPHILVL**SASHDA*CRIKQSFHSLRKHFLQVASV*LGLKELGQLLTHFPQTTLFLPSKLDHL  1308
                QSWS  *+   +  QTLD +TSDS  CT  T+ +  SI HS Q P     F +HMCFD+DHQQE+*K H     D  Q +  G  E HQ+ RN  P GL   *E LQR + PN   LIC P P   +HPFP  F*LNLLEP  V+Q L+I LQ SS*SSC  + +Q Q CQARLS L +* QK    +A   N * SHHLS QL+  A+TP  F P QNLE+ LSL  S K GQE IV LF+AHPPL    R QS +H *    LCQ E  CAR  **PQ  H*+H   +C+ L+KL  +TSCS+  LD  LQ CD       +*E   H ++   +*L*SCSH  GHKV ND T +  FH  AT + QTS+SPHIL  **SASHDA*C+I+ SF SL KH+   AS   GL ++     HF +  + L SK  HL
Subject   3329  QSWSPS*NDMAVWTQTLDSQTSDSQCCTCRTYPQVISIYHSAQLPVLRDPFGSHMCFDRDHQQEK*KHHFVWLTDKGQYSLEGTVEPHQK*RNGLPSGLQFS*ETLQRSQRPNLLFLICQPLPLCNYHPFPSLF*LNLLEPFWVKQRLRICLQTSS*SSCTESFYQLQRCQARLSTLEI*YQKLIFLRAMAWNR*TSHHLSHQLSPLANTPAAFQPFQNLESKLSLIHSLKGGQEQIVSLFSAHPPLCSAGRCQSSQHV*YARWLCQIELTCARQG**PQSPH*YHT*RKCQMLRKLQRDTSCSNHHLDTALQICDLWRACTGS*EHPLHVYRAQRR*L*SCSHLMGHKVENDLTASIRFHTEATRYLQTSNSPHILG***SASHDA*CKIRLSFRSLHKHYH*AASKRFGLTKMDLQEIHFQRKNVCLLSKQAHL  4636

Range 7: 3434 to 4189 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
214.1 bits(461) 0.0 139/252(55%) 0/252(0%) Minus/Plus
Query      448  MLTQRMK*LLYSALGIM*G*SL*HQNMR*AGSLGKVSGPYVEFCV*SPIISNLVPLLMAA*SQLLHQHLEGVR*RFLITYVDPAPITFLKNYVKGGV*T*CI*QKLLKLSTSVPNVMSMVKLRLLIQAGAYLLCLT*RMNTLGMSKRLVTGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLSGRKNFRGACWEV*LA**VMRNLMIQNLGLLECLLLTSNKEN*QSCLAHLGLERVSYTRAS*RDLKEN  1203
                ML QR K*  Y ALGIM*G*SL  QNMR* GSL   SG  VE    S II NLVP  MAA*SQL       V+  FL T   P  IT+LK+ VK  V*T*CI  KL K  T   +V+SM +LR    AGA  L LT*  + L M +RL T  + *RWMS EK ND LLT F *  QR*  FQVL G K+ RG C   *L **VMR+L I + G  E  LL SN E+*QSCLA L L +   TRA *R LK N
Subject   3434  MLMQRTK**PYFALGIM*G*SLLPQNMR*VGSLEIASGLCVESYACSQIIFNLVPH*MAA*SQLSPLRSVDVKWMFLTTCAGPPQITYLKSCVKVVV*T*CISLKLSKHLTFALSVISMGRLRSSTLAGACQLYLT*PTSILDMLRRLATARRA*RWMS*EK*NDLLLTSFQ*MDQR*LTFQVLKGLKSCRGVC*GA*LV**VMRSLTIPSHGSQEYQLLISNLES*QSCLAPLELVKAFCTRAL*RGLKAN  4189

Range 8: 4223 to 4390 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.6 bits(150) 0.0 32/56(57%) 0/56(0%) Minus/Plus
Query      247  QIQSKGTWKWMMSVRW*RQANQRRRVGMSLPLKSFLEKLQA*RLVIA*SLMKFSYS  414
                QIQ K TWKWM+  +W R ANQ+++VG   PLK FL KLQ *R  IA  LM+F+ S
Subject   4223  QIQLKETWKWMIVAKWQRLANQKKKVGTL*PLKCFLGKLQT*RQAIASFLMRFNCS  4390

Range 9: 4466 to 4636 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.5 bits(141) 0.0 32/57(56%) 0/57(0%) Minus/Plus
Query        1  KAHMILKKIELFWVLNRVTY*GWSKESHIGTTWRVGGS*IQCLIQDYPVTSKKAP*L  171
                KAHM  K+I  +W L+RV Y* + + S  GTT RVGG *IQCL  D  V S++AP*L
Subject   4466  KAHMTPKRIAQYWELSRVIY*DYLRVSPTGTTLRVGGL*IQCLSPDCHVISRRAP*L  4636

Grapevine rupestris stem pitting associated virus isolate SK704 A, complete genome

Sequence ID: KX274274.1 Length: 8725 Number of Matches: 11

Range 1: 3322 to 4635 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
994.0 bits(2163) 0.0 407/438(93%) 0/438(0%) Minus/Plus
Query        2  LSTDGLALKAGIRSFVESESTVDPALSSLTIQKQLGENAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVEVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLVEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMT  1315
                LSTDGLALKAGIRSFVESES  DPALS+ T+ KQLG+NAYAENEMIALFCIRHHVRLIIITPEYEVSWKFG+SEWPLCGILCL+SNHFQPCAPLNGCMITAIASALGRREV+VLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCD+NGEIEVINP GR+SALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLS+NGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWL+G+STS+IK RELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK+DLEMDD CKV KAGKSK+EGWDVVTFEVFLRK+  LKAGHCVIFDEVQLFPPGY+DLCLL IRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRL+EGKSYRYN+ESRRFVNPMF+SRLPC+FKKGSMT
Subject   3322  LSTDGLALKAGIRSFVESESIADPALSTQTVLKQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMT  4635

Range 2: 3462 to 4634 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
658.1 bits(1430) 0.0 316/391(81%) 0/391(0%) Plus/Minus
Query        3  VMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSTSLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHXXXXXXXXXXEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSARSKLGKYVIFDPFKESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQMXXXXXXXXXYIMFRPPP*HSSSKM*LVLGLHK*LRTSTSRLPSADAIAVIMQPLRGAQGWK*LDFKHRIPHRGHSLSPNFQLTSYSGVIMISLT*CLMQNK  1175
                VMEPFLK  G+L+SNIGFTNLRLS LYL D PS++LNMSLCSAP IA SF ESYVL*QGSPA EMKASLR+  R RS *PGG S TSSKITQ PAFR   FLR TSKVTTSQPS FDLPAF TL  SSISRS LIE ARA LGET VTN PSDLF+KLLYRKL PAP VPSTTVNS  L+ EVD P S G ESLNFSSLITPVKPPSKHP SFSA SKLGK VIFDPF E RSRADR TF SSSTF+L GPLPIFSTCL+CS VMSN+ADMRP GLITSISPL SHLAQMS ASKASA+YIMFRPPP H+SSK+* V GLH+*LRTSTSRLPSA+AIAVIMQP  GAQG K* D KH+IPH+GHSLSPNFQLTSYSGVIMISLT*CLMQNK
Subject   3462  VMEPFLK*HGSLDSNIGFTNLRLSILYL*DLPSSNLNMSLCSAPSIARSFWESYVL*QGSPASEMKASLRMVNRQRST*PGGKSWTSSKITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRSFLIELARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTFLSSSTFMLCGPLPIFSTCLICSLVMSNKADMRPLGLITSISPLISHLAQMSNASKASARYIMFRPPPWHNSSKI*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHKGHSLSPNFQLTSYSGVIMISLT*CLMQNK  4634

Range 3: 3324 to 3410 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.8 bits(98) 0.0 20/29(69%) 0/29(0%) Plus/Minus
Query     1227  VRLERAGSTVDSLSTNDLIPAFKARPSVL  1313
                V ++RAGS +DSLSTN+ +PAFKA PSVL
Subject   3324  VWVDRAGSAMDSLSTNERMPAFKASPSVL  3410

Range 4: 3433 to 4635 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
449.2 bits(974) 0.0 210/401(52%) 0/401(0%) Plus/Minus
Query        2  SHGAFFEVTG*S*IKHWIYEPPTLQVVPI*LSFDQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*INVTRGE*LNFIKDHAMTSL*ACNFSKKDFKGNDIPTLLL*FACLHHLTLIIHFQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCAKHDCQFSLFDVRSRHSSKPRF*IIKFLITYHAS*TSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPVTNLFDMPNVFIRYVKQSRYAPAWINNLNFTIDITFGTDVESFKSFC*IHHVQTPPLT*FFKNVIGAGST*VIKNLYLTPSKC*CNSCDHAAIKRGTRLEMIGL*TQNST*GPLTFPKLPAHLIFWCYNDQPHMMPNAE*SNHFILCVSI  1204
                SHGA  ++T  S +KHWI++PP L +VP+ L+    QYVTL S    ++ L +ICALT +TSK +ESVT+    T +NV R + L+ IK+H M  L*  N S+K FKG+++PT  L*FACL H   IIHFQV F+*I *SPP *+K Y+ +FR LH+A V +  +  K +KHDCQF  FD+ S +  +P   IIKFLITY+ S* S Q  L+ F PLK WK+ YL  +  K+VKS SF+FSQ IHLY LR + NL ++  +FI YVK S +A A INNLNF+I+IT GT+VE F+    +HHVQ   L  FFK++I   S  ++K+++LT ++   NS  HAAI+ GT L+MI L  QNST* PLT  K P HLI W  NDQPHMMPNAE*  H +LC+SI
Subject   3433  SHGALLKMTWQSGLKHWIHKPPALNIVPVGLALK*SQYVTLLSP*YRAVLLGVICALTGVTSK*NESVTSYG**TKVNVARRKKLDLIKNHTMACL*IFNLSEKYFKGHNVPTFSL*FACLCHFATIIHFQVLFN*IS*SPPG*NKGYELTFRPLHKAFVQKAFACSKSSKHDCQFPRFDI*S*YP*EPWLGIIKFLITYNTS*AS*QTSLQLFSPLKAWKVSYLRSIH*KEVKSRSFHFSQFIHLYALRAIANLLNVSYMFIGYVK*S*HASARINNLNFSINITLGTNVECFEGLSEVHHVQATTLAQFFKDMICGRSAQIVKDIHLTSAERRGNSGYHAAIQWGTGLKMI*LQAQNST*RPLTISKFPTHLILWGDNDQPHMMPNAE*GYHLVLCISI  4635

Range 5: 3327 to 4487 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
402.9 bits(873) 0.0 199/387(51%) 0/387(0%) Minus/Plus
Query      150  HRWSSFEGRNKVVCGK*VNS*PSSFKPNYTEATWRKCLRRE*NDCFILH*ASCEADHYNTRI*GELEVWGK*VAPMWNSVFKVQSFPTLCPS*WLHDHSYCISTWKA*GRGS*LLM*TQHQSHF*RTMSRGGSEHDVFSRSF*SFRHLCQM*CQW*N*GY*SRRAHICSV*HNE*TH*ACRKDW*RASKYKGG*AAKS*TISS*PAFFERVKDNIFSKF*AGGKTSGVLAGRFNWRDK**EI**FKTLACWSVYF*HQTKRIDSRAWHIWGWKEFPIQELHEEI*RKICNICLT*AGSSKFNQKGPGNG**V*GGEGRQIKEGGLGCRYL*SLS*KSYRPKGWSLRDL**SSAIPPWLH*SMSSCYSQ*RFHLSCW*SLSKHI*FSK  1310
                HR + FE  +  +C K*++   SS  PN  EATWR+CL RE +D  ILH*ASCEADHY+ R+*GELE+W  *VA MWN V  ++SF TLCP  WLHD+ YC+   + *G   *L + T H+S+ *R + R   EHDV      S RHLCQ+*  W N*GY*S R H+  +*HN+*T+    +DW   +++KGG*  KS TI S*P F E ++DN+ SK * G K +G+ A R NW  K**EI**F+ +A   + F +Q   IDSRAW+ W  ++  +Q+L+EE+*R + N+C T  GSS FN KGPGNG* +  G+GRQIKE  LG   L*S+S K  + KG  L D **  A   WL * +S  +++*RFH +CW* LSKHI*  K
Subject   3327  HRRACFESWHTFIC*K*IHCRSSSVNPNSFEATWRQCLCRERDDSLILH*ASCEADHYHPRV*GELEIWR**VAFMWNFVLAIKSFSTLCPIEWLHDNRYCLCARQT*GGCP*LSVQTFHKSYL*RIVPRWWPEHDVPR*GLRSIRHLCQV*Y*WRN*GY*S*RTHVSFI*HNQ*TYKTR*EDWQWPAEHKGG*TEKSETICS*PPFNEWIEDNLLSKL*EG*KAAGMFARRLNWCYK**EI**FQAMALRDINFKYQISGIDSRAWNFWSRQKLSVQKLYEEV*R*VRNLCFTQEGSS*FN*KGPGNG*WLQSGKGRQIKERRLGRCDL*SISQKD*KSKGRPLCDF**GPAFSSWLR*PLSINHTK*RFHFTCW*PLSKHI*LPK  4487

Range 6: 4466 to 4636 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.4 bits(108) 0.0 27/57(47%) 0/57(0%) Minus/Plus
Query        1  KAHMILKKIELFWVLNRVTY*GWSKESHIGTTWRVGGS*IQCLIQDYPVTSKKAP*L  171
                KAHM  K+   +  L++VTY* + + S  GT  R GG *IQCL  D  V  ++AP*L
Subject   4466  KAHMTPKRTARY*GLSKVTY*DYLRASPTGTILRAGGL*IQCLSPDCHVILRRAP*L  4636

Range 7: 3326 to 4486 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
352.1 bits(762) 0.0 196/387(51%) 0/387(0%) Plus/Minus
Query      151  FENHMCFDKDHQQER*KRHCE*QEDIDQCNQGGIAELHQRSRNDQPLGL*LF*ERLQR*RHPNPPSLICLPSPPYTHHPFPGPF*LNLLEPA*VRQMLQIFLQIXXXXXCIGNSFQPQMCQARLSILFV*CQK*TLQQAKVLNH*ISHHLSRQLNLPASTPEVFPPAQNLENMLSLTRSKKAGQELIV*LFAAHPPLYFEARYQSFRHA*CVHSLCQTEQICARLD**PQFXXXXXIWHRCRKLQKLLLNTSCSDPPLDIVLQKCDWCWVYISN*EPLPHAFQVLMQ*L*SCSH*EGHKVGNDWTLNTEFHIGATHFPQTSSSPHILVL**SASHDA*CRIKQSFHSLRKHFLQVASV*LGLKELGQLLTHFPQTTLFLPSKLDHLC  1311
                F +HMCFD+ HQQ +*KRH     D  Q +Q   A  HQ+S N  PL    F*E LQR + PN  SLICLP P   HHPFPGPF*LN LEP+ V+Q L+ +LQ SS*S C  +    Q  QARLSI  +*  K    +A   NH*ISHHL  QL+L A+ P  F P+Q+LE+ LS   S K GQE IV LF+ HPPL      QS +    VH LCQ +  C R D**PQF H*+H WH+CR L++    TSCS   L  +LQ+ D   V   +*   PH  +   Q*  SCSH  GH+V ND   +T+FHI ATH+ Q S+SPH L  **SASHDA*CRI+ S  SL KH  QVAS   GL EL     HF Q  +   SK   LC
Subject   3326  FGSHMCFDRGHQQVK*KRHFVWLIDKGQRSQEEKAGPHQKSHNGLPLDFQSF*EILQRSQRPNLLSLICLPLPLCNHHPFPGPF*LN*LEPSWVKQRLRTYLQTSS*SFCTESFCLLQKFQARLSIPEI*YLKLISLRAMAWNH*ISHHL*HQLSLLANIPAAFQPSQSLESKLSSIHSLKGGQEQIVSLFSVHPPLCSAGHCQSSQRVLYVHWLCQIKLTCVR*D**PQFLH*YHTWHKCRMLRRPQRGTSCSGHHLGTILQRYDLWKVCTDS*GHPPHVCRAQRQ*RLSCSHSMGHRVENDLIASTKFHIKATHYLQISNSPHTLG***SASHDA*CRIRLSSRSLHKHCRQVASKLFGLTELDLQWIHFQQMNVCQLSKQARLC  4486

Range 8: 4508 to 4636 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.9 bits(83) 0.0 20/43(47%) 0/43(0%) Plus/Minus
Query        1  QSWSLF*SYRVILNQTLDLRTSDSPSCTYMTFLRPASICHSVQ  129
                QSWS  *+   +  QTLD +TS S  CT  T  +  SICH  Q
Subject   4508  QSWSPS*NDMAVWTQTLDSQTSGSQYCTCRTCPQVISICHFAQ  4636

Range 9: 3365 to 4183 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
199.5 bits(429) 0.0 137/273(50%) 0/273(0%) Minus/Plus
Query      454  LWKVSQQLTQLFQA*LYRSNLEKMLTQRMK*LLYSALGIM*G*SL*HQNMR*AGSLGKVSGPYVEFCV*SPIISNLVPLLMAA*SQLLHQHLEGVR*RFLITYVDPAPITFLKNYVKGGV*T*CI*QKLLKLSTSVPNVMSMVKLRLLIQAGAYLLCLT*RMNTLGMSKRLVTGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLSGRKNFRGACWEV*LA**VMRNLMIQNLGLLECLLLTSNKEN*QSCLAHLGLERVSYTRAS*RDLK  1272
                L KV+    QL Q   + SNL  ML QR +*  YSALGIM*G*SL  Q+MR* G+L  VSG YVEFC  + II N VP  MAA*  LL      VR   L    D   I  LKN  K   *T*C   +  K ST VP+V+ M KLRLLI A A  L LT* MN     +RL    + *RWM+ EK ND LLT F *  +R*  FQ L G K+ R  C E *L  *VMRNLMI + G     L  SN  N*QSCL  L   +   T+A *R LK
Subject   3365  LLKVNPLQIQLCQPKQF*SNLATMLMQRTR**PYSALGIM*G*SLSPQSMR*VGNLEIVSGLYVEFCACNQIIFNPVPH*MAA**PLLPLRSADVRWMSLTICADLPQIISLKNCAKVVA*T*CTSLRPSKHSTFVPSVILMEKLRLLILADACQLYLT*PMNI*DTLRRLAMARRA*RWMN*EK*NDLLLTSFQ*MDRR*LTFQALRGLKSCRDVC*EA*LVL*VMRNLMIPSHGSQGYQLQISNLGN*QSCLELLEQAKAFCTKAL*RGLK  4183

Range 10: 4226 to 4411 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
74.4 bits(156) 0.0 34/62(55%) 0/62(0%) Minus/Plus
Query      226  IQSKGTWKWMMSVRW*RQANQRRRVGMSLPLKSFLEKLQA*RLVIA*SLMKFSYSPLVTLIY  411
                IQ K TWKWMM  +W RQANQR +VG   PLK F E+L+ *R  I * LM+ S+  L TL +
Subject   4226  IQLKRTWKWMMVAKWQRQANQREKVGTL*PLKYFSERLKI*RQAIV*FLMRSSFFLLATLTF  4411

Range 11: 4509 to 4634 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
27.6 bits(54) 0.0 18/42(43%) 0/42(0%) Minus/Plus
Query        3  *TE*HIEAGRRKVI*VQLGESEVRKSNV*FKITL*LQKRLHD  128
                * +*HIE    +V+ VQ  E EV +SNV* +  +   + LHD
Subject   4509  *AK*HIEIT*GQVLQVQY*EPEVCESNV*VQTAMSF*EGLHD  4634

Nucleotide Sequence (384 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 33 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
39
78
117
156
195
234
273
312
351
384

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 10

Range 1: 1801 to 2157 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
190.2 bits(413) 0.0 86/119(72%) 0/119(0%) Plus/Plus
Query       24  GFQWSLLKQRVNLKFLKGSETSFVELSSEVARLYKSVVLQALSPSASSGLAKVYVDHSSSQLCSDSHFTSDDELSNPALANDLTFEELLPGDFQGSQTAEQIACAHPTNDALRIDLAPP  380
                G QW LLKQRVNLKFLK  ETSFVELS  VA+LYKSV+LQ LSP ASSGLAKVY+DHSS QLCSD HF SDDEL N ALAND+     L  D QG QT EQ  CAHP NDA  I LAPP
Subject   1801  GLQWFLLKQRVNLKFLKCGETSFVELSCGVAKLYKSVILQVLSPDASSGLAKVYIDHSSPQLCSDFHFMSDDELPNSALANDVISGSSLSEDRQGFQTVEQAECAHPANDAPCIVLAPP  2157

Range 2: 1793 to 2158 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
172.0 bits(369) 0.0 83/122(68%) 0/122(0%) Plus/Plus
Query       16  VCLVFSGLFLSRESI*NF*KVVKPPLLSSLVRWLGFTSLLCCKLCPQALHQAWLKYMLITLPRSFVLIPTSRQTMSCQILLWLMI*PLKNYYQETFKDLRLQSKSHVPIPQMMLFALIWLHR  381
                + + FSG FLSRESI*NF* VVKP LLSS V     TS L C+ C Q LHQA LKY+LITLPRSFVLI TS Q MSCQILL LM+* L ++YQ+T KD +L SK +VPIPQMML AL WLHR
Subject   1793  IFVAFSGFFLSRESI*NF*NVVKPLLLSSPVGLQNSTSQLFCRFCLQMLHQA*LKYILITLPRSFVLIFTSCQMMSCQILL*LMM*YLDHHYQKTVKDSKL*SKLNVPIPQMMLLALFWLHR  2158

Range 3: 1780 to 2019 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
117.0 bits(249) 0.0 55/80(69%) 0/80(0%) Minus/Minus
Query        3  LIV*REVGIRTKLRGRVINIYFSQA**SAWGQSLQHNRLVKPSHLTRELNKGGFTTFQKFQIDSLLKKRPLKTKHTQHIA  242
                LI+* EV IRTKLRGRVINIYFS A**S W Q+LQ+N LV+  + T ELNK GFTTFQKFQIDSLLKK+PLK    + ++
Subject   1780  LII*HEVKIRTKLRGRVINIYFS*A**SIWRQNLQNN*LVEFCNPTGELNKRGFTTFQKFQIDSLLKKKPLKATKMEELS  2019

Range 4: 2001 to 2156 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.0 bits(153) 0.0 30/52(58%) 0/52(0%) Minus/Minus
Query      224  GGARSMRRASFVGWAHAICSAV*DP*KSPGNNSSKVRSLARAGFDNSSSDVK  379
                GGA++M+ ASF GWAH+ CS V +P*+S  N+   + SLARA F NSSSD+K
Subject   2001  GGAKTMQGASFAGWAHSACSTVWNP*RSSDNDDPDITSLARAEFGNSSSDMK  2156

Range 5: 1805 to 2044 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
117.5 bits(250) 0.0 57/80(71%) 0/80(0%) Minus/Minus
Query       28  H*PEQDLTTHRLT*SGNQNKAARKSDQHIL*PGLMKRLGTKLATQQTCKA*PPH*RAQQRRFHYLSKISN*LSA*EETTE  267
                H* EQ+L TH LT*S NQNKAA KSDQ+IL*  LMK L TK A   TC+   PH RAQQ+RFH++SKISN*LSA*EETTE
Subject   1805  H*LEQNLATHHLT*SENQNKAAGKSDQYIL*LSLMKHLETKPAE*LTCRVLQPHRRAQQKRFHHISKISN*LSA*EETTE  2044

Range 6: 2074 to 2157 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 21/28(75%) 0/28(0%) Minus/Minus
Query      297  RWSQINAKSIICGMGTCDLLCSLRSLKV  380
                RWSQ NA+SIICGMGT  LL SL SL V
Subject   2074  RWSQNNARSIICGMGTFSLLYSLESLTV  2157

Range 7: 1800 to 1868 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.9 bits(96) 0.0 19/23(83%) 0/23(0%) Minus/Minus
Query       23  KEVSLPFKNFKLTLCLRRDH*KP  91
                KEVS  FKNFKLTLCLRR+H*+P
Subject   1800  KEVSPHFKNFKLTLCLRRNH*RP  1868

Range 8: 2099 to 2155 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.6 bits(78) 0.0 13/19(68%) 0/19(0%) Minus/Minus
Query      322  VEPDQCEEHHLWDGHMRFA  378
                VEP QC+EHHL DGH++ A
Subject   2099  VEPKQCKEHHLRDGHIQLA  2155

Range 9: 1917 to 1961 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.1 bits(68) 0.0 12/15(80%) 0/15(0%) Minus/Minus
Query      140  YTLARPDEALGDKAC  184
                YTLA+PDEA GDK C
Subject   1917  YTLAKPDEASGDKTC  1961

Range 10: 1797 to 2042 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.3 bits(158) 0.0 56/82(68%) 0/82(0%) Plus/Plus
Query       20  VWFSVVSS*AESQFEIFER**NLLC*AL**GG*ALQVCCVASFVPKRFIRPG*SIC*SXXXXXXXXXPLHVRR*VVKSCSG*  265
                +W SVVSS*AESQFEIFE  *NL C*AL  G   LQV   A FV + FIR  *SI *SLF AALF*F LHVR *V K CS *
Subject   1797  LWPSVVSS*AESQFEIFEMW*NLFC*ALLWGCKTLQVSYSAGFVSRCFIRLS*SIY*SLFPAALF*FSLHVR**VAKFCSS*  2042

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 10

Range 1: 1801 to 2160 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
207.9 bits(452) 0.0 91/120(76%) 0/120(0%) Plus/Plus
Query       24  GFQWSLLKQRVNLKFLKGSETSFVELSSEVARLYKSVVLQALSPSASSGLAKVYVDHSSSQLCSDSHFTSDDELSNPALANDLTFEELLPGDFQGSQTAEQIACAHPTNDALRIDLAPPS  383
                G QW LLKQR+NLKFLKGSETSFVELS  VA+LYKSV+LQ  SP+A SGLA+VYVDHSSSQLCS SHF SDDEL NPALA+++T E  L  D QG QT EQ ACAHP NDAL IDLAPPS
Subject   1801  GLQWFLLKQRINLKFLKGSETSFVELSCGVAKLYKSVILQVSSPNALSGLARVYVDHSSSQLCSGSHFMSDDELPNPALADNITSEASLSEDCQGFQTVEQAACAHPINDALCIDLAPPS  2160

Range 2: 1808 to 2158 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
170.1 bits(365) 0.0 82/117(70%) 0/117(0%) Plus/Plus
Query       31  SGLFLSRESI*NF*KVVKPPLLSSLVRWLGFTSLLCCKLCPQALHQAWLKYMLITLPRSFVLIPTSRQTMSCQILLWLMI*PLKNYYQETFKDLRLQSKSHVPIPQMMLFALIWLHR  381
                SG FL+RE I*NF*KVVKPPL +SLV    FTS L CK   Q L+QA L+YMLITLPRSFVL PTS Q MSCQILL L+I  L+ +YQ+T KD +L SK HVPIP MMLFALIWLHR
Subject   1808  SGFFLNRE*I*NF*KVVKPPL*NSLVGLQNFTSQLFCKFRLQMLYQA*LEYMLITLPRSFVLAPTSCQMMSCQILL*LIILLLRRHYQKTVKDSKL*SKPHVPIP*MMLFALIWLHR  2158

Range 3: 1808 to 2035 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
121.1 bits(258) 0.0 57/76(75%) 0/76(0%) Minus/Minus
Query       31  EQDLTTHRLT*SGNQNKAARKSDQHIL*PGLMKRLGTKLATQQTCKA*PPH*RAQQRRFHYLSKISN*LSA*EETT  258
                EQDL TH LT*SG+QNKAARKSDQHIL* GL+K L TKLA   TCK   PH R  QRRFHYLSKISN  S *EETT
Subject   1808  EQDLATHHLT*SGSQNKAARKSDQHIL*LGLIKHLETKLAK*LTCKVLQPHKRVLQRRFHYLSKISNLFSV*EETT  2035

Range 4: 2074 to 2157 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.8 bits(109) 0.0 23/28(82%) 0/28(0%) Minus/Minus
Query      297  RWSQINAKSIICGMGTCDLLCSLRSLKV  380
                RWSQINAKSII GMGTC LL SL SL V
Subject   2074  RWSQINAKSIIYGMGTCGLLYSLESLTV  2157

Range 5: 1917 to 2159 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
113.8 bits(242) 0.0 58/81(72%) 0/81(0%) Minus/Minus
Query      140  DGGARSMRRASFVGWAHAICSAV*DP*KSPGNNSSKVRSLARAGFDNSSSDVKWXXXXXXXXXXSTYTLARPDEALGDKAC  382
                DGGA+SM+RASF+GWAHA CS V +P*+S  N++S+V   ARAGF NSSSD+KWE EQSCEEE*STYTLARPD+A GD+ C
Subject   1917  DGGAKSMQRASFMGWAHAACSTVWNP*QSSDNDASEVILSARAGFGNSSSDMKWEPEQSCEEE*STYTLARPDKAFGDETC  2159

Range 6: 1800 to 1868 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.3 bits(97) 0.0 18/23(78%) 0/23(0%) Minus/Minus
Query       23  KEVSLPFKNFKLTLCLRRDH*KP  91
                KEVSLPFKNFK  LCLRR+H +P
Subject   1800  KEVSLPFKNFKFILCLRRNHWRP  1868

Range 7: 1780 to 2019 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
108.3 bits(230) 0.0 51/80(64%) 0/80(0%) Minus/Minus
Query        3  LIV*REVGIRTKLRGRVINIYFSQA**SAWGQSLQHNRLVKPSHLTRELNKGGFTTFQKFQIDSLLKKRPLKTKHTQHIA  242
                LI+* EVG RTKLRGRVINIY S A**S W ++LQ+N LVK  + TRE  KGGFTTFQKFQI SL KK+PL+    + ++
Subject   1780  LII*HEVGARTKLRGRVINIYSS*A**SIWRRNLQNN*LVKFCNPTREFYKGGFTTFQKFQIYSLFKKKPLEATKMEELS  2019

Range 8: 2099 to 2158 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.9 bits(107) 0.0 17/20(85%) 0/20(0%) Minus/Minus
Query      322  TVEPDQCEEHHLWDGHMRFA  381
                TVEP+QC+EHHLWDGHMR A
Subject   2099  TVEPNQCKEHHLWDGHMRLA  2158

Range 9: 1797 to 2042 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.8 bits(194) 0.0 58/82(71%) 0/82(0%) Plus/Plus
Query       20  VWFSVVSS*AESQFEIFER**NLLC*AL**GG*ALQVCCVASFVPKRFIRPG*SIC*SXXXXXXXXXPLHVRR*VVKSCSG*  265
                +W  VVSS* E++FEIFER**NLLC  L  G   LQV   ASFV K FIRP *SIC*SLFLAALF  PLHVR *V KSCS *
Subject   1797  LWPPVVSS*TENKFEIFER**NLLCRTLLWGCKTLQVSYFASFVSKCFIRPS*SIC*SLFLAALFWLPLHVR**VAKSCSS*  2042

Range 10: 2094 to 2117 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.5 bits(45) 0.0 7/8(88%) 0/8(0%) Plus/Plus
Query      317  CRANRMCP  340
                CRA+RMCP
Subject   2094  CRASRMCP  2117

Grapevine rupestris stem pitting associated virus isolate TEMP BR replicase, 24.4 kDa protein, 12.8 kDa protein, 8.4 kDa protein, and 28 kDa protein genes, complete cds

Sequence ID: KX925556.1 Length: 8700 Number of Matches: 1

Range 1: 1772 to 2008 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
77.8 bits(165) 0.0 36/79(46%) 0/79(0%) Plus/Plus
Query        6  YVLGVFGFQWSLLKQRVNLKFLKGSETSFVELSSEVARLYKSVVLQALSPSASSGLAKVYVDHSSSQLCSDSHFTSDDE  242
                Y     G QW +LK+R NLKFLK   +SF  LS EV ++YKS+VLQA  P A   L KV++  S       S   S+DE
Subject   1772  YCFNSCGLQWFILKRRSNLKFLKDRASSFASLSCEVIKIYKSIVLQATLPEALLSLTKVFIRDSDLNDAFTSELASNDE  2008

Rupestris stem pitting associated virus strain SG1, complete genome

Sequence ID: AY881626.1 Length: 8742 Number of Matches: 1

Range 1: 1783 to 2019 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
77.3 bits(164) 0.0 38/79(48%) 0/79(0%) Plus/Plus
Query        6  YVLGVFGFQWSLLKQRVNLKFLKGSETSFVELSSEVARLYKSVVLQALSPSASSGLAKVYVDHSSSQLCSDSHFTSDDE  242
                Y     G QW LLK+R NLKFLK   +SF  LS EV + YKSVVLQA  P A   L KV++  S      +S   S DE
Subject   1783  YCFNSCGLQWFLLKRRSNLKFLKDRVSSFANLSCEVIKAYKSVVLQATLPEALLSLTKVFIRDSDLNGAFNSELASHDE  2019

Grapevine rupestris stem pitting associated virus isolate GRSPaV LSL, complete genome

Sequence ID: KR054735.1 Length: 8754 Number of Matches: 2

Range 1: 1795 to 2019 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.6 bits(180) 0.0 36/75(48%) 0/75(0%) Plus/Plus
Query       18  VFGFQWSLLKQRVNLKFLKGSETSFVELSSEVARLYKSVVLQALSPSASSGLAKVYVDHSSSQLCSDSHFTSDDE  242
                + G QW LL +R NL+FL   ++SF +LS +VA++Y  VV Q   P+ASSGL +VY+DHS S   S+ HF +  E
Subject   1795  ICGLQWFLLCRRANLRFLCDRKSSFADLSCQVAKIYNLVVAQVTLPNASSGLIQVYIDHSRSNKNSNPHFAATGE  2019

Range 2: 1789 to 2004 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.1 bits(103) 0.0 26/72(36%) 0/72(0%) Minus/Minus
Query       12  EVGIRTKLRGRVINIYFSQA**SAWGQSLQHNRLVKPSHLTRELNKGGFTTFQKFQIDSLLKKRPLKTKHTQ  227
                +V I   +R  VIN+  +Q **     +L +N+++   HLT ++ KGG +  QK +I S  +K+PLKT + +
Subject   1789  KVWIGILVRAGVINVNLNQT**CIR*CNLCYNQVINLRHLTGKVGKGGLSVTQKPEIGSPAEKKPLKTTNVE  2004

Nucleotide Sequence (303 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 33 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
31
62
93
124
155
186
217
248
279
303

Descriptions

Alignments

Rupestris stem pitting associated virus partial CP gene for coat protein, genomic RNA, isolate RSPaV BE

Sequence ID: AM180420.1 Length: 670 Number of Matches: 11

Range 1: 246 to 524 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
211.8 bits(456) 0.0 85/93(91%) 0/93(0%) Minus/Plus
Query        2  WAKKGFNENEKFDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF  280
                + + G  EN +FDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF
Subject    246  FGESGIAENAQFDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF  524

Range 2: 257 to 523 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
188.9 bits(406) 0.0 82/89(92%) 0/89(0%) Plus/Minus
Query        3  NFSFSLNPFLAQLAGGIPVSKWIFHTIFA*YMQNLRSVVTSLIIPAISDLFNSQKGLLPIRVDL*ELPTSEQWRAMSIATSNFSFSLNP  269
                NFSFSLNPFLAQLAGGIPVSKW+FHTIFA*YMQNLRSVVTSLIIPAISD FNSQKGLLPIRVDL ELPTSEQWRAMSIATSN +FS  P
Subject    257  NFSFSLNPFLAQLAGGIPVSKWMFHTIFA*YMQNLRSVVTSLIIPAISDRFNSQKGLLPIRVDLCELPTSEQWRAMSIATSNCAFSAMP  523

Range 3: 267 to 524 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
181.1 bits(389) 0.0 74/86(86%) 0/86(0%) Plus/Minus
Query        2  KLFILIKSFLGPISWWYSRLQMDIPHDFCIVHAKSAQCGHLSYNSSNFRPI*LAEGAFTNQG*PLRTSHIRAVASNVYCNIKLFIL  259
                KLFILIKSFLGPISWWYSRLQMD+PH+FC+VHAKSAQCG+L YNSSNFRPI*LAEGA TN G PL TSHIR VA NVYCNIKL IL
Subject    267  KLFILIKSFLGPISWWYSRLQMDVPHNFCVVHAKSAQCGYLPYNSSNFRPI*LAEGALTN*GRPL*TSHIRTVAGNVYCNIKLRIL  524

Range 4: 268 to 525 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
171.5 bits(368) 0.0 72/86(84%) 0/86(0%) Plus/Minus
Query        1  QTFHSH*ILSWPN*LVVFPSPNGYSTRFLHSTCKICAVWSPLL*FQQFQTYLTRRRGFYQSGLTSENFPHQSSGEQCLLQHQTFHS  258
                QTFHSH*ILSWPN*LVVFPSPNG ST+FL STCKICAVW P L*FQQFQT LTRRRG YQ G T  NFPHQ+SG QCLLQHQT HS
Subject    268  QTFHSH*ILSWPN*LVVFPSPNGCSTQFLRSTCKICAVWLPPL*FQQFQTDLTRRRGSYQLG*TFVNFPHQNSGGQCLLQHQTAHS  525

Range 5: 278 to 523 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
164.2 bits(352) 0.0 69/82(84%) 0/82(0%) Minus/Plus
Query        3  V*CCNRHCSPLL*CGKFSEVNPDW*KPLLRVK*V*NCWNYKRGDHTAQILHVLCKNRVEYPFGDGNTTS*LGQERI**E*KV  248
                V*CCNRHC PL *CGKF++V P+W*+PLLRVK V*NCWNYK G+HTAQILHVL KN VE+PFGDGNTTS*LGQERI**E*KV
Subject    278  V*CCNRHCPPLF*CGKFTKVYPNW*EPLLRVKSV*NCWNYKGGNHTAQILHVLRKNCVEHPFGDGNTTS*LGQERI**E*KV  523

Range 6: 319 to 525 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.0 bits(308) 0.0 61/69(88%) 0/69(0%) Minus/Plus
Query        1  WEVLRGQP*LVKAPSAS*IGLKLLEL*ER*PHCADFACTMQKSCGISIWRREYHQLIGPRKDLMRMKSL  207
                WEV +G P*LV+APSAS*IGLKLLEL* R*PHCADFACT QK CG SIWRREYHQLIGPRKDLMRMKSL
Subject    319  WEVHKGLP*LVRAPSAS*IGLKLLEL*GR*PHCADFACTTQKLCGTSIWRREYHQLIGPRKDLMRMKSL  525

Range 7: 468 to 524 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.8 bits(109) 0.0 19/19(100%) 0/19(0%) Minus/Plus
Query      245  TGIPPANWAKKGFNENEKF  301
                TGIPPANWAKKGFNENEKF
Subject    468  TGIPPANWAKKGFNENEKF  524

Range 8: 468 to 524 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.0 bits(105) 0.0 19/19(100%) 0/19(0%) Plus/Minus
Query      245  KLFILIKSFLGPISWWYSR  301
                KLFILIKSFLGPISWWYSR
Subject    468  KLFILIKSFLGPISWWYSR  524

Range 9: 466 to 525 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.1 bits(103) 0.0 20/20(100%) 0/20(0%) Plus/Minus
Query      244  QTFHSH*ILSWPN*LVVFPS  303
                QTFHSH*ILSWPN*LVVFPS
Subject    466  QTFHSH*ILSWPN*LVVFPS  525

Range 10: 466 to 522 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 19/19(100%) 0/19(0%) Minus/Plus
Query      247  RREYHQLIGPRKDLMRMKS  303
                RREYHQLIGPRKDLMRMKS
Subject    466  RREYHQLIGPRKDLMRMKS  522

Range 11: 467 to 526 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.8 bits(98) 0.0 19/20(95%) 0/20(0%) Plus/Minus
Query      243  SNFSFSLNPFLAQLAGGIPV  302
                +NFSFSLNPFLAQLAGGIPV
Subject    467  ANFSFSLNPFLAQLAGGIPV  526

Rupestris stem pitting associated virus partial CP gene for coat protein, genomic RNA, isolate RSPaV CH S4G

Sequence ID: AM180429.1 Length: 670 Number of Matches: 11

Range 1: 246 to 524 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
211.8 bits(456) 0.0 85/93(91%) 0/93(0%) Minus/Plus
Query        2  WAKKGFNENEKFDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF  280
                + + G  EN +FDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF
Subject    246  FGESGIAENAQFDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF  524

Range 2: 257 to 523 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
184.4 bits(396) 0.0 82/89(92%) 0/89(0%) Plus/Minus
Query        3  NFSFSLNPFLAQLAGGIPVSKWIFHTIFA*YMQNLRSVVTSLIIPAISDLFNSQKGLLPIRVDL*ELPTSEQWRAMSIATSNFSFSLNP  269
                NFSFSLNPFLAQLAGGIPVSK +FHTIFA*YMQNLRSVVTSLIIPAISD FNSQKGLLPIRVDL*ELPTSEQWRAMSIATSN +FS  P
Subject    257  NFSFSLNPFLAQLAGGIPVSK*MFHTIFA*YMQNLRSVVTSLIIPAISDRFNSQKGLLPIRVDL*ELPTSEQWRAMSIATSNCAFSAMP  523

Range 3: 270 to 524 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
183.9 bits(395) 0.0 74/85(87%) 0/85(0%) Plus/Minus
Query        2  KLFILIKSFLGPISWWYSRLQMDIPHDFCIVHAKSAQCGHLSYNSSNFRPI*LAEGAFTNQG*PLRTSHIRAVASNVYCNIKLFI  256
                KLFILIKSFLGPISWWYSRLQM++PHDFC+VHAKSAQCG+L YNSSNFRPI*LAEGA TN G*PLRTSHIR VA NVYCNI+L I
Subject    270  KLFILIKSFLGPISWWYSRLQMNVPHDFCVVHAKSAQCGYLPYNSSNFRPI*LAEGALTN*G*PLRTSHIRTVAGNVYCNIELRI  524

Range 4: 271 to 525 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
175.6 bits(377) 0.0 73/85(86%) 0/85(0%) Plus/Minus
Query        1  QTFHSH*ILSWPN*LVVFPSPNGYSTRFLHSTCKICAVWSPLL*FQQFQTYLTRRRGFYQSGLTSENFPHQSSGEQCLLQHQTFH  255
                QTFHSH*ILSWPN*LVVFPSPN  STRFL STCKICAVW P L*FQQFQT LTRRRG YQ GLTSENFPHQ+SG QCLLQH+T H
Subject    271  QTFHSH*ILSWPN*LVVFPSPNECSTRFLRSTCKICAVWLPPL*FQQFQTDLTRRRGSYQLGLTSENFPHQNSGGQCLLQHRTAH  525

Range 5: 284 to 523 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
168.8 bits(362) 0.0 70/80(88%) 0/80(0%) Minus/Plus
Query        3  CCNRHCSPLL*CGKFSEVNPDW*KPLLRVK*V*NCWNYKRGDHTAQILHVLCKNRVEYPFGDGNTTS*LGQERI**E*KV  242
                CCNRHC PL *CGKFSEVNP+W*+PLLRVK V*NCWNYK G+HTAQILHVL KNRVE+ FGDGNTTS*LGQERI**E*KV
Subject    284  CCNRHCPPLF*CGKFSEVNPNW*EPLLRVKSV*NCWNYKGGNHTAQILHVLRKNRVEHSFGDGNTTS*LGQERI**E*KV  523

Range 6: 319 to 525 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
151.8 bits(325) 0.0 64/69(93%) 0/69(0%) Minus/Plus
Query        1  WEVLRGQP*LVKAPSAS*IGLKLLEL*ER*PHCADFACTMQKSCGISIWRREYHQLIGPRKDLMRMKSL  207
                WEVLRGQP*LV+APSAS*IGLKLLEL* R*PHCADFACT QKSCG  IWRREYHQLIGPRKDLMRMKSL
Subject    319  WEVLRGQP*LVRAPSAS*IGLKLLEL*GR*PHCADFACTTQKSCGTFIWRREYHQLIGPRKDLMRMKSL  525

Range 7: 468 to 524 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.8 bits(109) 0.0 19/19(100%) 0/19(0%) Minus/Plus
Query      245  TGIPPANWAKKGFNENEKF  301
                TGIPPANWAKKGFNENEKF
Subject    468  TGIPPANWAKKGFNENEKF  524

Range 8: 468 to 524 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.0 bits(105) 0.0 19/19(100%) 0/19(0%) Plus/Minus
Query      245  KLFILIKSFLGPISWWYSR  301
                KLFILIKSFLGPISWWYSR
Subject    468  KLFILIKSFLGPISWWYSR  524

Range 9: 466 to 525 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.1 bits(103) 0.0 20/20(100%) 0/20(0%) Plus/Minus
Query      244  QTFHSH*ILSWPN*LVVFPS  303
                QTFHSH*ILSWPN*LVVFPS
Subject    466  QTFHSH*ILSWPN*LVVFPS  525

Range 10: 466 to 522 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 19/19(100%) 0/19(0%) Minus/Plus
Query      247  RREYHQLIGPRKDLMRMKS  303
                RREYHQLIGPRKDLMRMKS
Subject    466  RREYHQLIGPRKDLMRMKS  522

Range 11: 467 to 526 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.8 bits(98) 0.0 19/20(95%) 0/20(0%) Plus/Minus
Query      243  SNFSFSLNPFLAQLAGGIPV  302
                +NFSFSLNPFLAQLAGGIPV
Subject    467  ANFSFSLNPFLAQLAGGIPV  526

Rupestris stem pitting associated virus isolate RSPaV PN, complete genome

Sequence ID: AY368172.2 Length: 8743 Number of Matches: 9

Range 1: 8037 to 8315 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
211.8 bits(456) 0.0 85/93(91%) 0/93(0%) Minus/Plus
Query        2  WAKKGFNENEKFDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF  280
                + + G  EN +FDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF
Subject   8037  FGESGIAENAQFDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF  8315

Range 2: 8048 to 8314 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
188.5 bits(405) 0.0 81/89(91%) 0/89(0%) Plus/Minus
Query        3  NFSFSLNPFLAQLAGGIPVSKWIFHTIFA*YMQNLRSVVTSLIIPAISDLFNSQKGLLPIRVDL*ELPTSEQWRAMSIATSNFSFSLNP  269
                NFSFSLNPFLAQLAGGIPVSKW+FHTIFA*YMQNLRSVVTSLIIPAISDLFNSQKGLLPI+VDL ELPTSEQWRA+SIATSN +FS  P
Subject   8048  NFSFSLNPFLAQLAGGIPVSKWMFHTIFA*YMQNLRSVVTSLIIPAISDLFNSQKGLLPIKVDLWELPTSEQWRAISIATSNCAFSAMP  8314

Range 3: 8058 to 8315 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
161.4 bits(346) 0.0 63/86(73%) 0/86(0%) Plus/Minus
Query        2  KLFILIKSFLGPISWWYSRLQMDIPHDFCIVHAKSAQCGHLSYNSSNFRPI*LAEGAFTNQG*PLRTSHIRAVASNVYCNIKLFIL  259
                KLFILIKS LGP+SWWYSRLQMD+PH+ C+VHAKSAQCGH  YNSSNFRP+* AE A TNQG*PL  ++I AVA N+Y N++L IL
Subject   8058  KLFILIKSLLGPVSWWYSRLQMDVPHNLCVVHAKSAQCGHFPYNSSNFRPV*FAERALTNQG*PLGATYIGAVAGNIYRNVELRIL  8315

Range 4: 8059 to 8316 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
137.6 bits(294) 0.0 61/86(71%) 0/86(0%) Plus/Minus
Query        1  QTFHSH*ILSWPN*LVVFPSPNGYSTRFLHSTCKICAVWSPLL*FQQFQTYLTRRRGFYQSGLTSENFPHQSSGEQCLLQHQTFHS  258
                QTFHSH*I SWP+*LVVFPSPNG ST+ L STCKICAVWS  L*FQQFQT L RR+G YQS LT  ++ H+SSG Q L Q +T HS
Subject   8059  QTFHSH*IPSWPS*LVVFPSPNGCSTQSLRSTCKICAVWSLPL*FQQFQTCLIRRKGSYQSRLTFGSYLHRSSGGQYLSQRRTAHS  8316

Range 5: 8078 to 8314 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
133.9 bits(286) 0.0 58/79(73%) 0/79(0%) Minus/Plus
Query        3  CNRHCSPLL*CGKFSEVNPDW*KPLLRVK*V*NCWNYKRGDHTAQILHVLCKNRVEYPFGDGNTTS*LGQERI**E*KV  239
                C+R+C PLL C    +VN DW*+P LR+K V*NCWNYK  DHTAQILHVL K+ VE+PFGDGNTTS*LGQE I**E*KV
Subject   8078  CDRYCPPLLRCR*LPKVNLDW*EPFLRIKQV*NCWNYKGSDHTAQILHVLRKDCVEHPFGDGNTTS*LGQEGI**E*KV  8314

Range 6: 8122 to 8316 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
124.8 bits(266) 0.0 52/65(80%) 0/65(0%) Minus/Plus
Query        1  RGQP*LVKAPSAS*IGLKLLEL*ER*PHCADFACTMQKSCGISIWRREYHQLIGPRKDLMRMKSL  195
                +GQP*LV+A SA+* GLKLLEL* +*PHCADFACT Q+ CG SIWRREYHQL GPR+DLMRMKSL
Subject   8122  KGQP*LVRALSAN*TGLKLLEL*GK*PHCADFACTTQRLCGTSIWRREYHQLTGPRRDLMRMKSL  8316

Range 7: 8259 to 8315 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.8 bits(109) 0.0 19/19(100%) 0/19(0%) Minus/Plus
Query      245  TGIPPANWAKKGFNENEKF  301
                TGIPPANWAKKGFNENEKF
Subject   8259  TGIPPANWAKKGFNENEKF  8315

Range 8: 8258 to 8317 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.8 bits(98) 0.0 19/20(95%) 0/20(0%) Plus/Minus
Query      243  SNFSFSLNPFLAQLAGGIPV  302
                +NFSFSLNPFLAQLAGGIPV
Subject   8258  ANFSFSLNPFLAQLAGGIPV  8317

Range 9: 8259 to 8315 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.8 bits(98) 0.0 17/19(89%) 0/19(0%) Plus/Minus
Query      245  KLFILIKSFLGPISWWYSR  301
                KLFILIKS LGP+SWWYSR
Subject   8259  KLFILIKSLLGPVSWWYSR  8315

Rupestris stem pitting associated virus isolate PGD2 28 kDa coat protein gene, complete cds

Sequence ID: DQ364984.1 Length: 867 Number of Matches: 11

Range 1: 311 to 589 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
211.8 bits(456) 0.0 85/93(91%) 0/93(0%) Minus/Plus
Query        2  WAKKGFNENEKFDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF  280
                + + G  EN +FDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF
Subject    311  FGESGIAENAQFDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF  589

Range 2: 322 to 588 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
191.2 bits(411) 0.0 83/89(93%) 0/89(0%) Plus/Minus
Query        3  NFSFSLNPFLAQLAGGIPVSKWIFHTIFA*YMQNLRSVVTSLIIPAISDLFNSQKGLLPIRVDL*ELPTSEQWRAMSIATSNFSFSLNP  269
                NFSFSLNPFLAQLAGGIPVSKWIFHTIFA*YMQNLRSVVTSLIIPAISD FNSQKGLLPI+VDL*ELPTSEQWRAMSIATSN +FS  P
Subject    322  NFSFSLNPFLAQLAGGIPVSKWIFHTIFA*YMQNLRSVVTSLIIPAISDRFNSQKGLLPIKVDL*ELPTSEQWRAMSIATSNCAFSAMP  588

Range 3: 335 to 589 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
186.2 bits(400) 0.0 76/85(89%) 0/85(0%) Plus/Minus
Query        2  KLFILIKSFLGPISWWYSRLQMDIPHDFCIVHAKSAQCGHLSYNSSNFRPI*LAEGAFTNQG*PLRTSHIRAVASNVYCNIKLFI  256
                KLFILIKSFLGPISWWYSRLQMDIPH+FCIVHAKSAQCG+L YNSSNFRP+*LAEGA TN G*PLRTSHIR VA NVYCNIKL I
Subject    335  KLFILIKSFLGPISWWYSRLQMDIPHNFCIVHAKSAQCGYLPYNSSNFRPV*LAEGALTN*G*PLRTSHIRTVAGNVYCNIKLRI  589

Range 4: 336 to 590 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
183.4 bits(394) 0.0 75/85(88%) 0/85(0%) Plus/Minus
Query        1  QTFHSH*ILSWPN*LVVFPSPNGYSTRFLHSTCKICAVWSPLL*FQQFQTYLTRRRGFYQSGLTSENFPHQSSGEQCLLQHQTFH  255
                QTFHSH*ILSWPN*LVVFPSPNGYST+FLHSTCKICAVW P L*FQQFQT LTRRRG YQ  LTSENFPHQ+SG QCLLQHQT H
Subject    336  QTFHSH*ILSWPN*LVVFPSPNGYSTQFLHSTCKICAVWLPPL*FQQFQTGLTRRRGSYQLRLTSENFPHQNSGGQCLLQHQTAH  590

Range 5: 343 to 588 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
174.3 bits(374) 0.0 73/82(89%) 0/82(0%) Minus/Plus
Query        3  V*CCNRHCSPLL*CGKFSEVNPDW*KPLLRVK*V*NCWNYKRGDHTAQILHVLCKNRVEYPFGDGNTTS*LGQERI**E*KV  248
                V*CCNRHC PL *CGKFSEVN +W*+PLLRVK V*NCWNYK G+HTAQILHVLCKN VEYPFGDGNTTS*LGQERI**E*KV
Subject    343  V*CCNRHCPPLF*CGKFSEVNLNW*EPLLRVKPV*NCWNYKGGNHTAQILHVLCKNCVEYPFGDGNTTS*LGQERI**E*KV  588

Range 6: 384 to 590 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
154.6 bits(331) 0.0 65/69(94%) 0/69(0%) Minus/Plus
Query        1  WEVLRGQP*LVKAPSAS*IGLKLLEL*ER*PHCADFACTMQKSCGISIWRREYHQLIGPRKDLMRMKSL  207
                WEVLRGQP*LV+APSAS* GLKLLEL* R*PHCADFACTMQK CGISIWRREYHQLIGPRKDLMRMKSL
Subject    384  WEVLRGQP*LVRAPSAS*TGLKLLEL*GR*PHCADFACTMQKLCGISIWRREYHQLIGPRKDLMRMKSL  590

Range 7: 533 to 589 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.8 bits(109) 0.0 19/19(100%) 0/19(0%) Minus/Plus
Query      245  TGIPPANWAKKGFNENEKF  301
                TGIPPANWAKKGFNENEKF
Subject    533  TGIPPANWAKKGFNENEKF  589

Range 8: 533 to 589 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.0 bits(105) 0.0 19/19(100%) 0/19(0%) Plus/Minus
Query      245  KLFILIKSFLGPISWWYSR  301
                KLFILIKSFLGPISWWYSR
Subject    533  KLFILIKSFLGPISWWYSR  589

Range 9: 531 to 590 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.1 bits(103) 0.0 20/20(100%) 0/20(0%) Plus/Minus
Query      244  QTFHSH*ILSWPN*LVVFPS  303
                QTFHSH*ILSWPN*LVVFPS
Subject    531  QTFHSH*ILSWPN*LVVFPS  590

Range 10: 531 to 587 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 19/19(100%) 0/19(0%) Minus/Plus
Query      247  RREYHQLIGPRKDLMRMKS  303
                RREYHQLIGPRKDLMRMKS
Subject    531  RREYHQLIGPRKDLMRMKS  587

Range 11: 532 to 591 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.8 bits(98) 0.0 19/20(95%) 0/20(0%) Plus/Minus
Query      243  SNFSFSLNPFLAQLAGGIPV  302
                +NFSFSLNPFLAQLAGGIPV
Subject    532  ANFSFSLNPFLAQLAGGIPV  591

Rupestris stem pitting associated virus isolate NE423TP I 28 kDa coat protein gene, complete cds

Sequence ID: DQ364990.1 Length: 867 Number of Matches: 11

Range 1: 311 to 589 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
211.8 bits(456) 0.0 85/93(91%) 0/93(0%) Minus/Plus
Query        2  WAKKGFNENEKFDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF  280
                + + G  EN +FDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF
Subject    311  FGESGIAENAQFDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF  589

Range 2: 322 to 588 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
192.6 bits(414) 0.0 84/89(94%) 0/89(0%) Plus/Minus
Query        3  NFSFSLNPFLAQLAGGIPVSKWIFHTIFA*YMQNLRSVVTSLIIPAISDLFNSQKGLLPIRVDL*ELPTSEQWRAMSIATSNFSFSLNP  269
                NFSFSLNPFLAQLAGGIPVSKWIFHTIFA*YMQNLRSVVTSLIIPAISD FNSQKGLLPIRVDL*ELPTSEQWRAMSIATSN +FS  P
Subject    322  NFSFSLNPFLAQLAGGIPVSKWIFHTIFA*YMQNLRSVVTSLIIPAISDRFNSQKGLLPIRVDL*ELPTSEQWRAMSIATSNCAFSAMP  588

Range 3: 336 to 590 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
187.1 bits(402) 0.0 76/85(89%) 0/85(0%) Plus/Minus
Query        1  QTFHSH*ILSWPN*LVVFPSPNGYSTRFLHSTCKICAVWSPLL*FQQFQTYLTRRRGFYQSGLTSENFPHQSSGEQCLLQHQTFH  255
                QTFHSH*ILSWPN*LVVFPSPNGYST+FLHSTCKICAVW P L*FQQFQT LTRRRG YQ GLTSENFPHQ+SG QCLLQHQT H
Subject    336  QTFHSH*ILSWPN*LVVFPSPNGYSTQFLHSTCKICAVWLPPL*FQQFQTGLTRRRGSYQLGLTSENFPHQNSGGQCLLQHQTAH  590

Range 4: 335 to 589 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
186.2 bits(400) 0.0 76/85(89%) 0/85(0%) Plus/Minus
Query        2  KLFILIKSFLGPISWWYSRLQMDIPHDFCIVHAKSAQCGHLSYNSSNFRPI*LAEGAFTNQG*PLRTSHIRAVASNVYCNIKLFI  256
                KLFILIKSFLGPISWWYSRLQMDIPH+FCIVHAKSAQCG+L YNSSNFRP+*LAEGA TN G*PLRTSHIR VA NVYCNIKL I
Subject    335  KLFILIKSFLGPISWWYSRLQMDIPHNFCIVHAKSAQCGYLPYNSSNFRPV*LAEGALTN*G*PLRTSHIRTVAGNVYCNIKLRI  589

Range 5: 343 to 588 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
178.9 bits(384) 0.0 74/82(90%) 0/82(0%) Minus/Plus
Query        3  V*CCNRHCSPLL*CGKFSEVNPDW*KPLLRVK*V*NCWNYKRGDHTAQILHVLCKNRVEYPFGDGNTTS*LGQERI**E*KV  248
                V*CCNRHC PL *CGKFSEVNP+W*+PLLRVK V*NCWNYK G+HTAQILHVLCKN VEYPFGDGNTTS*LGQERI**E*KV
Subject    343  V*CCNRHCPPLF*CGKFSEVNPNW*EPLLRVKPV*NCWNYKGGNHTAQILHVLCKNCVEYPFGDGNTTS*LGQERI**E*KV  588

Range 6: 384 to 590 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
154.6 bits(331) 0.0 65/69(94%) 0/69(0%) Minus/Plus
Query        1  WEVLRGQP*LVKAPSAS*IGLKLLEL*ER*PHCADFACTMQKSCGISIWRREYHQLIGPRKDLMRMKSL  207
                WEVLRGQP*LV+APSAS* GLKLLEL* R*PHCADFACTMQK CGISIWRREYHQLIGPRKDLMRMKSL
Subject    384  WEVLRGQP*LVRAPSAS*TGLKLLEL*GR*PHCADFACTMQKLCGISIWRREYHQLIGPRKDLMRMKSL  590

Range 7: 533 to 589 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.8 bits(109) 0.0 19/19(100%) 0/19(0%) Minus/Plus
Query      245  TGIPPANWAKKGFNENEKF  301
                TGIPPANWAKKGFNENEKF
Subject    533  TGIPPANWAKKGFNENEKF  589

Range 8: 533 to 589 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.0 bits(105) 0.0 19/19(100%) 0/19(0%) Plus/Minus
Query      245  KLFILIKSFLGPISWWYSR  301
                KLFILIKSFLGPISWWYSR
Subject    533  KLFILIKSFLGPISWWYSR  589

Range 9: 531 to 590 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.1 bits(103) 0.0 20/20(100%) 0/20(0%) Plus/Minus
Query      244  QTFHSH*ILSWPN*LVVFPS  303
                QTFHSH*ILSWPN*LVVFPS
Subject    531  QTFHSH*ILSWPN*LVVFPS  590

Range 10: 531 to 587 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 19/19(100%) 0/19(0%) Minus/Plus
Query      247  RREYHQLIGPRKDLMRMKS  303
                RREYHQLIGPRKDLMRMKS
Subject    531  RREYHQLIGPRKDLMRMKS  587

Range 11: 532 to 591 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.8 bits(98) 0.0 19/20(95%) 0/20(0%) Plus/Minus
Query      243  SNFSFSLNPFLAQLAGGIPV  302
                +NFSFSLNPFLAQLAGGIPV
Subject    532  ANFSFSLNPFLAQLAGGIPV  591

Nucleotide Sequence (613 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 33 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
62
124
186
248
310
372
434
496
558
613

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate Tannat Rspav1, complete genome

Sequence ID: KR528585.1 Length: 8595 Number of Matches: 12

Range 1: 7563 to 8021 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
300.7 bits(650) 0.0 146/153(95%) 0/153(0%) Minus/Plus
Query        1  HVDSSSGDHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHTVEEIDYHC*IG*MASQIGKLPGESNEAFXXXXXXXXXXXXXXQPEGSNTSPTLSGVLAKRKRVIENALSKSVDMREVLKHETVVISPNVMDEGAIDELIRAF  459
                HVDSSSG HQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVSH VEEIDYHC*IG*MASQIG+LPGESNEAFEARLK+LELARAQKQPEGSNT PTLSG+LAKRKRVIENALSK+VDMREVLKHETVVISPNVMDEGAIDELIRAF
Subject   7563  HVDSSSGTHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHKVEEIDYHC*IG*MASQIGRLPGESNEAFEARLKSLELARAQKQPEGSNTPPTLSGILAKRKRVIENALSKTVDMREVLKHETVVISPNVMDEGAIDELIRAF  8021

Range 2: 7409 to 7555 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
125.2 bits(267) 0.0 49/49(100%) 0/49(0%) Minus/Plus
Query      467  PKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSGLGRNCNCHPN  613
                PKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSGLGRNCNCHPN
Subject   7409  PKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSGLGRNCNCHPN  7555

Range 3: 7411 to 8016 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
366.3 bits(793) 0.0 155/202(77%) 0/202(0%) Plus/Minus
Query        6  HESAHLLLPHP*HSGKSPQFRVSTPPSCPLILRVHFRSPSYAWQAHH*E*VTYWNLLAVFGLELTPELLTGPRMPHLTHPGVSQFDLPFSQFNNDNQFLQQYG*PLKPSNLPTLPSQWMQGPHLGHNFQSKLIRQWP**NNLGDRRYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAIRPITSIKGTKFSDCPNIPELGKDCL  611
                HESA LL  HP*H GKSP FRVS PPSCP  L+VH    S  WQ  H*E*V Y NL A F L LTP +L G + PHL H  VSQFDLPFSQFNNDNQFLQ YG*PLKPSNLPT P QWMQ  HLG NFQS+LIRQW **+NLG+  YCCLHEQGFGWQLQFLPRPEFQTDNTC+NAIRP+TSIKGTKFSD PNIPELGKDCL
Subject   7411  HESARLLHLHP*HLGKSPPFRVSKPPSCPPSLKVHSL*LSCVWQECH*E*VVY*NLPAAFEL*LTPAILAGLQKPHLIHREVSQFDLPFSQFNNDNQFLQPYG*PLKPSNLPTPPLQWMQELHLGRNFQSRLIRQWL**SNLGECHYCCLHEQGFGWQLQFLPRPEFQTDNTCINAIRPMTSIKGTKFSDWPNIPELGKDCL  8016

Range 4: 7415 to 7786 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
255.8 bits(552) 0.0 111/124(90%) 0/124(0%) Plus/Minus
Query      236  DSPGSFPI*LAI*PIQQ**SISSTVWLTPKAFKPPNTSFTVDARASLGPQFSIKIDSPVALIKQPW*SPLLLST*ARIWMAITIPTKTRIPNR*YMYECNQTYNKH*GHKVLRLPKYP*AGKGL  607
                DSPGS PI*LAI PI Q**SISST+WLTPKAFKPPNTSFTVDARASLGPQFSIKIDSPVALIKQPW* PLLLST*ARIWMAITIPTKTRIPNR*YMY+CNQTY+KH*GHK+LRL KY   G+GL
Subject   7415  DSPGSLPI*LAIQPI*Q**SISSTLWLTPKAFKPPNTSFTVDARASLGPQFSIKIDSPVALIKQPW*VPLLLST*ARIWMAITIPTKTRIPNR*YMYKCNQTYDKH*GHKILRLAKYSRTGEGL  7786

Range 5: 7841 to 7981 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
96.4 bits(204) 0.0 42/47(89%) 0/47(0%) Plus/Minus
Query       41  TFGEITTVSCFNTSLMSTDFESAFSITLLRLASTPLRVGDVLEPSGC  181
                TFGEITTVSCF TSLMST FESAFSITLLRLA  PLRVG VLEPSGC
Subject   7841  TFGEITTVSCFKTSLMSTVFESAFSITLLRLARMPLRVGGVLEPSGC  7981

Range 6: 7416 to 7808 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
240.7 bits(519) 0.0 105/131(80%) 0/131(0%) Plus/Minus
Query      214  PGLECLI*LTREFPNLTCHLANSTMIINFFNSMANP*SLQTSQHFLHSGCKGLTWATIFNQN*FASGPDKTTLVIAATAVYMSKDLDGNYNSYQDQNSKQIIHV*MQSDL*QALRAQSSQTAQISLSWERT  606
                PG + LI* T + PNLTCH AN TMIINFFN MANP*SLQTSQH L+SGCK  TWA IFNQ+*FASG DK TLV A TAVYMSKDLDGNYNSYQDQNSKQIIHV*MQSDL*QALRAQ+SQT QI  +W RT
Subject   7416  PGFKSLI*FTGKSPNLTCHSANLTMIINFFNLMANP*SLQTSQHLLYSGCKSFTWAAIFNQD*FASGSDKATLVSATTAVYMSKDLDGNYNSYQDQNSKQIIHV*MQSDL*QALRAQNSQTGQIFPNWGRT  7808

Range 7: 7866 to 8021 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.0 bits(177) 0.0 32/52(62%) 0/52(0%) Plus/Minus
Query        1  KSTNQLIYCSLIHNIRGNHHSFVFQHLPHVH*F*ECIFDHPLTLGKHTTKSR  156
                K TNQL+YC+ IH+I GNHH FVFQ+LPHVH  *+CI  + L  GK+ T+SR
Subject   7866  KCTNQLVYCTFIHDIWGNHHRFVFQNLPHVHRL*KCILYNSLAFGKNATESR  8021

Range 8: 7417 to 7695 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
176.6 bits(379) 0.0 76/93(82%) 0/93(0%) Minus/Plus
Query      327  VLSQLRDIWAV*ELCALNACYRSDCIHTCIICLEFWSW*EL*LPSKSLLM*TAVAAITKVVLSGPLANQF*LKIVAQVRPLHPL*RKCWEV*R  605
                VL Q  +IW V*E CALNAC+RSDCI+TCIICLEFWSW*EL*LPSKSLLM*TAV A+TKV LS PLANQ *LKI AQV+ LHPL*R+CWEV*R
Subject   7417  VLPQFGNIWPV*EFCALNACHRSDCIYTCIICLEFWSW*EL*LPSKSLLM*TAVVALTKVALSEPLANQS*LKIAAQVKLLHPL*RRCWEV*R  7695

Range 9: 7753 to 8016 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.4 bits(252) 0.0 55/88(62%) 0/88(0%) Minus/Plus
Query        6  WQVKLGNSRVSQMRHSRPG*KLWS*LEPKNSQKVPIRHLLLVVCLPSVRG*SKMHSQNQWT*GRC*NTKLW*FPRMLWMREQ*MS*FV  269
                WQVKLG+  V+QMR  +PG*  WS*LE K+S+KV I HLL V  LP+ R   +MH Q +WT*GR *NTK W*FP+M WM+ Q* S*FV
Subject   7753  WQVKLGDFPVNQMRLLKPG*NRWS*LELKSSRKVLIHHLLSVAFLPNAREL*RMHFQRRWT*GRF*NTKRW*FPQMSWMKVQ*TS*FV  8016

Range 10: 7844 to 8017 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.0 bits(190) 0.0 37/58(64%) 0/58(0%) Minus/Plus
Query        5  ARRFQYVTYS*WCACQA*EGDRKCTLKISGHEGGVETRNCGDFPECYG*GSNR*ADSC  178
                A RF Y TYS W +CQ  E  R+CT K  GHEGG ETRN GDFP+C+G*  NR ADSC
Subject   7844  AGRF*YTTYSQWHSCQTQESYRECTFKDGGHEGGFETRNGGDFPKCHG*RCNRRADSC  8017

Range 11: 7595 to 7711 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.3 bits(169) 0.0 31/39(79%) 0/39(0%) Minus/Plus
Query      311  LFYQGHWRINFD*KLWPK*GPCIHCEGSVGRFEGFRG*P  427
                L YQ HWRIN D*KL PK*  CIHC+G VGRFEGFRG*P
Subject   7595  LLYQSHWRINLD*KLRPK*SSCIHCKGGVGRFEGFRG*P  7711

Range 12: 7413 to 7514 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.3 bits(123) 0.0 25/34(74%) 0/34(0%) Minus/Plus
Query      508  NSPFPAQGYLGSLRTLCP*CLL*V*LHSYMYYLF  609
                +SP P + YL SLR LCP*CL *V*LH YMYYLF
Subject   7413  SSPSPVREYLASLRILCP*CLS*V*LHLYMYYLF  7514

Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome

Sequence ID: JX559646.1 Length: 8726 Number of Matches: 12

Range 1: 7581 to 8039 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
298.4 bits(645) 0.0 144/153(94%) 0/153(0%) Minus/Plus
Query        1  HVDSSSGDHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHTVEEIDYHC*IG*MASQIGKLPGESNEAFXXXXXXXXXXXXXXQPEGSNTSPTLSGVLAKRKRVIENALSKSVDMREVLKHETVVISPNVMDEGAIDELIRAF  459
                HVD+SSG HQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALG+SHT EEIDY C*IG*MASQIGKLPGESNEAFEARLK+LELAR QKQPEGSNT PTLSGVLAKRKRVIENALSK+VDMREVLKHETVVISPNVMDEGAIDELIRAF
Subject   7581  HVDNSSGSHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGISHTTEEIDYRC*IG*MASQIGKLPGESNEAFEARLKSLELARTQKQPEGSNTPPTLSGVLAKRKRVIENALSKTVDMREVLKHETVVISPNVMDEGAIDELIRAF  8039

Range 2: 7427 to 7573 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
125.2 bits(267) 0.0 49/49(100%) 0/49(0%) Minus/Plus
Query      467  PKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSGLGRNCNCHPN  613
                PKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSGLGRNCNCHPN
Subject   7427  PKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSGLGRNCNCHPN  7573

Range 3: 7429 to 8034 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
360.3 bits(780) 0.0 150/202(74%) 0/202(0%) Plus/Minus
Query        6  HESAHLLLPHP*HSGKSPQFRVSTPPSCPLILRVHFRSPSYAWQAHH*E*VTYWNLLAVFGLELTPELLTGPRMPHLTHPGVSQFDLPFSQFNNDNQFLQQYG*PLKPSNLPTLPSQWMQGPHLGHNFQSKLIRQWP**NNLGDRRYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAIRPITSIKGTKFSDCPNIPELGKDCL  611
                HESAHLL PHP*H  +   FRVS PPSCPL LRVH + PSY W AHH*E*    +LLA F    TP +  G +MPHL   G  Q DLPF+QFNNDNQFLQ YG* LKPSNLPT P +  QGPHLGHNFQSKL  QWP**+NLGD  YCCLHEQGFGWQLQFLPRPEFQTDNTCMNAIRP+TSIKGTKFSD PNIPELG DCL
Subject   7429  HESAHLLHPHP*HLERLQPFRVSIPPSCPLSLRVHSQ*PSYVWPAHH*E*AVCLSLLAAFEF*PTPVISAGLQMPHLIRRGAYQSDLPFNQFNNDNQFLQ*YG*SLKPSNLPTPPLRLTQGPHLGHNFQSKLTLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAIRPMTSIKGTKFSD*PNIPELGNDCL  8034

Range 4: 7439 to 7804 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
246.7 bits(532) 0.0 108/122(89%) 0/122(0%) Plus/Minus
Query      236  DSPGSFPI*LAI*PIQQ**SISSTVWLTPKAFKPPNTSFTVDARASLGPQFSIKIDSPVALIKQPW*SPLLLST*ARIWMAITIPTKTRIPNR*YMYECNQTYNKH*GHKVLRLPKYP*AGK  601
                DSPGS PI*LAI*PIQQ *SISS VWL PKAFKPPNTSFTVDARASLGPQFSIKIDSPVALIKQPW* PLLLST*ARIWMAI IPTKTRIPNR YMYECN TY+KH*GHK+LRL KY   GK
Subject   7439  DSPGSLPI*LAI*PIQQR*SISSVVWLIPKAFKPPNTSFTVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIAIPTKTRIPNRQYMYECN*TYDKH*GHKILRLTKYSRTGK  7804

Range 5: 7859 to 7999 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
102.3 bits(217) 0.0 44/47(94%) 0/47(0%) Plus/Minus
Query       41  TFGEITTVSCFNTSLMSTDFESAFSITLLRLASTPLRVGDVLEPSGC  181
                TFGEITTVSCFNTSLMST FESAFSITLLRLASTPLRVG V EPSGC
Subject   7859  TFGEITTVSCFNTSLMSTVFESAFSITLLRLASTPLRVGGVFEPSGC  7999

Range 6: 7434 to 7826 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
229.3 bits(494) 0.0 101/131(77%) 0/131(0%) Plus/Minus
Query      214  PGLECLI*LTREFPNLTCHLANSTMIINFFNSMANP*SLQTSQHFLHSGCKGLTWATIFNQN*FASGPDKTTLVIAATAVYMSKDLDGNYNSYQDQNSKQIIHV*MQSDL*QALRAQSSQTAQISLSWERT  606
                PG +CLI*   E  NLTCHL NST IINFF+SMANP*SLQTSQH L+   KGLTWATIFNQN* +SGPDK TLV A T VYMSKDLDGN NSYQDQNSKQ IHV*MQ DL*QALRAQ+SQT QI  +WE T
Subject   7434  PGFKCLI*FAGELTNLTCHLTNSTTIINFFSSMANP*SLQTSQHLLYG*RKGLTWATIFNQN*LSSGPDKATLVTATTVVYMSKDLDGNCNSYQDQNSKQTIHV*MQLDL*QALRAQNSQTDQIFPNWEMT  7826

Range 7: 7884 to 8039 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
88.1 bits(186) 0.0 34/52(65%) 0/52(0%) Plus/Minus
Query        1  KSTNQLIYCSLIHNIRGNHHSFVFQHLPHVH*F*ECIFDHPLTLGKHTTKSR  156
                K TNQLIYC+LIH+I  +++ FVFQ+LPHVH  *ECI ++PLT G+HTT+SR
Subject   7884  KCTNQLIYCTLIHDIWRDYNRFVFQYLPHVHCL*ECILNNPLTFGQHTTESR  8039

Range 8: 7435 to 7713 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
175.2 bits(376) 0.0 73/93(78%) 0/93(0%) Minus/Plus
Query      327  VLSQLRDIWAV*ELCALNACYRSDCIHTCIICLEFWSW*EL*LPSKSLLM*TAVAAITKVVLSGPLANQF*LKIVAQVRPLHPL*RKCWEV*R  605
                V+SQ  +IW+V*E CALNAC+RS+CIHTCI+CLEFWSW*EL LPSKSLLM*T V A+TKV LSGPL +QF*LKIVAQVRPL   *R+CWEV*R
Subject   7435  VISQFGNIWSV*EFCALNACHRSNCIHTCIVCLEFWSW*ELQLPSKSLLM*TTVVAVTKVALSGPLESQF*LKIVAQVRPLRQP*RRCWEV*R  7713

Range 9: 7771 to 8034 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
116.1 bits(247) 0.0 55/88(62%) 0/88(0%) Minus/Plus
Query        6  WQVKLGNSRVSQMRHSRPG*KLWS*LEPKNSQKVPIRHLLLVVCLPSVRG*SKMHSQNQWT*GRC*NTKLW*FPRMLWMREQ*MS*FV  269
                WQV+L +S  +QMRH +PG*  WS LE K+SQK     LL VVC P+VRG  +MHSQ QWT*GR *NTK  *  +M WMR Q*MS*FV
Subject   7771  WQVRLVSSPANQMRHLKPG*NHWSWLELKSSQKAQTHRLLSVVCWPNVRGLLRMHSQRQWT*GRY*NTKRL*SLQMSWMRVQ*MS*FV  8034

Range 10: 7613 to 7741 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.9 bits(192) 0.0 34/43(79%) 0/43(0%) Minus/Plus
Query      299  LFYQGHWRINFD*KLWPK*GPCIHCEGSVGRFEGFRG*PYC*R  427
                L YQGHWR+NFD*KLWPK*GPC++ +G VGRFEGFR *PY *R
Subject   7613  LLYQGHWRVNFD*KLWPK*GPCVNRKGGVGRFEGFRD*PYY*R  7741

Range 11: 7862 to 8035 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
89.0 bits(188) 0.0 37/58(64%) 0/58(0%) Minus/Plus
Query        5  ARRFQYVTYS*WCACQA*EGDRKCTLKISGHEGGVETRNCGDFPECYG*GSNR*ADSC  178
                ARR ++  YS WCA Q *EG  +CTLK SGHEGG+ETRN  +  +C+G*G NR*ADSC
Subject   7862  ARRLKHTAYSQWCAGQT*EGY*ECTLKDSGHEGGIETRNGCNLSKCHG*GCNR*ADSC  8035

Range 12: 7431 to 7532 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.1 bits(116) 0.0 25/34(74%) 0/34(0%) Minus/Plus
Query      508  NSPFPAQGYLGSLRTLCP*CLL*V*LHSYMYYLF  609
                +S FP + YL SLR LCP*CL *V*LHSYMY LF
Subject   7431  SSHFPVREYLVSLRILCP*CLS*V*LHSYMYCLF  7532

Grapevine Rupestris stem pitting associated virus, complete genome

Sequence ID: AF026278.1 Length: 8725 Number of Matches: 12

Range 1: 7581 to 8039 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
299.4 bits(647) 0.0 145/153(95%) 0/153(0%) Minus/Plus
Query        1  HVDSSSGDHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHTVEEIDYHC*IG*MASQIGKLPGESNEAFXXXXXXXXXXXXXXQPEGSNTSPTLSGVLAKRKRVIENALSKSVDMREVLKHETVVISPNVMDEGAIDELIRAF  459
                HVDSSSG+HQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVS TVEEIDYHC*IG*MASQIGKLPGESNEAFEARLK+LELARAQKQPEGSN  PTLSG+LAKRKR+IENALSK+VDMREVLKHETVVISPNVMDEGAIDELIRAF
Subject   7581  HVDSSSGNHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVSRTVEEIDYHC*IG*MASQIGKLPGESNEAFEARLKSLELARAQKQPEGSNAPPTLSGILAKRKRIIENALSKTVDMREVLKHETVVISPNVMDEGAIDELIRAF  8039

Range 2: 7427 to 7573 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
125.2 bits(267) 0.0 49/49(100%) 0/49(0%) Minus/Plus
Query      467  PKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSGLGRNCNCHPN  613
                PKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSGLGRNCNCHPN
Subject   7427  PKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSGLGRNCNCHPN  7573

Range 3: 7432 to 8034 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
372.2 bits(806) 0.0 156/201(78%) 0/201(0%) Plus/Minus
Query        6  HESAHLLLPHP*HSGKSPQFRVSTPPSCPLILRVHFRSPSYAWQAHH*E*VTYWNLLAVFGLELTPELLTGPRMPHLTHPGVSQFDLPFSQFNNDNQFLQQYG*PLKPSNLPTLPSQWMQGPHLGHNFQSKLIRQWP**NNLGDRRYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAIRPITSIKGTKFSDCPNIPELGKDC  608
                HESA LL  HP*H GK P FRVS PPSCP  L+VH    S  WQ  H*E*V + NL A F L LTP +L G + PHL H GVSQFDLPFSQFNNDNQFLQQYG*PLKPSNL T PSQWMQGPHLG +FQ KL  QWP**+NLGD  YCCLHEQGFGWQLQFLPRPEFQTDNTCMNAIRP+TSIKGTKFSD PNIPELGKDC
Subject   7432  HESARLLHLHP*HLGKLPPFRVSKPPSCPPSLKVHSL*SSCVWQECH*E*VVH*NLPAAFEL*LTPAILAGLQKPHLIHRGVSQFDLPFSQFNNDNQFLQQYG*PLKPSNLLTPPSQWMQGPHLGRSFQLKLTLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAIRPMTSIKGTKFSDWPNIPELGKDC  8034

Range 4: 7433 to 7804 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
245.3 bits(529) 0.0 109/124(88%) 0/124(0%) Plus/Minus
Query      236  DSPGSFPI*LAI*PIQQ**SISSTVWLTPKAFKPPNTSFTVDARASLGPQFSIKIDSPVALIKQPW*SPLLLST*ARIWMAITIPTKTRIPNR*YMYECNQTYNKH*GHKVLRLPKYP*AGKGL  607
                DSPGSFPI*LAI PI Q**SISSTV LTPKAFKPPNTSFTVDARASLGPQFSIKIDSPVAL+KQPW* PLLLST*ARIWMAITIPTKTRIPNR YMYEC+ TY+KH*GHK+LRL +YP A +GL
Subject   7433  DSPGSFPI*LAIQPI*Q**SISSTVRLTPKAFKPPNTSFTVDARASLGPQFSIKIDSPVALMKQPW*LPLLLST*ARIWMAITIPTKTRIPNRQYMYECD*TYDKH*GHKILRLAEYPRAREGL  7804

Range 5: 7859 to 7999 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.8 bits(194) 0.0 40/47(85%) 0/47(0%) Plus/Minus
Query       41  TFGEITTVSCFNTSLMSTDFESAFSITLLRLASTPLRVGDVLEPSGC  181
                TFGEITTVSCF TSLMST FESAFSI LLRLA  PLRVG  LEPSGC
Subject   7859  TFGEITTVSCFKTSLMSTVFESAFSIILLRLARMPLRVGGALEPSGC  7999

Range 6: 7446 to 7826 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
229.7 bits(495) 0.0 100/127(79%) 0/127(0%) Plus/Minus
Query      214  PGLECLI*LTREFPNLTCHLANSTMIINFFNSMANP*SLQTSQHFLHSGCKGLTWATIFNQN*FASGPDKTTLVIAATAVYMSKDLDGNYNSYQDQNSKQIIHV*MQSDL*QALRAQSSQTAQISLS  594
                PG + LI* T EFPNLTCH AN TMIINFFNS ANP*SLQTS H LHSGCKGLTWA +FN N* +SGP++ TLVIA TAVYMSKDLDGNYNSYQDQNSKQ IHV*M+ DL*QALRAQ+SQ  +IS S
Subject   7446  PGFKSLI*FTGEFPNLTCHSANLTMIINFFNSTANP*SLQTS*HLLHSGCKGLTWAAVFN*N*LSSGPNEATLVIATTAVYMSKDLDGNYNSYQDQNSKQTIHV*MRLDL*QALRAQNSQIGRISQS  7826

Range 7: 7884 to 8039 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.9 bits(179) 0.0 32/52(62%) 0/52(0%) Plus/Minus
Query        1  KSTNQLIYCSLIHNIRGNHHSFVFQHLPHVH*F*ECIFDHPLTLGKHTTKSR  156
                K TNQL+YC+ IH+I GN+H FVFQ+LPHVH  *+CI  +PL  GK+ T+SR
Subject   7884  KCTNQLVYCTFIHDIWGNYHRFVFQNLPHVHRL*KCILYNPLAFGKNATESR  8039

Range 8: 7435 to 7713 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
158.2 bits(339) 0.0 71/93(76%) 0/93(0%) Minus/Plus
Query      327  VLSQLRDIWAV*ELCALNACYRSDCIHTCIICLEFWSW*EL*LPSKSLLM*TAVAAITKVVLSGPLANQF*LKIVAQVRPLHPL*RKCWEV*R  605
                +L  L DI  +*E CALNAC+RS+ IHTCI+CLEFWSW*EL*LPSKSLLM*TAV AITKV   GPL +QF*LK  AQVRPLHPL*R+C EV*R
Subject   7435  ILP*LWDIRPI*EFCALNACHRSNRIHTCIVCLEFWSW*EL*LPSKSLLM*TAVVAITKVASLGPLESQF*LKTAAQVRPLHPL*RRC*EV*R  7713

Range 9: 7771 to 8034 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
125.7 bits(268) 0.0 57/88(65%) 0/88(0%) Minus/Plus
Query        6  WQVKLGNSRVSQMRHSRPG*KLWS*LEPKNSQKVPIRHLLLVVCLPSVRG*SKMHSQNQWT*GRC*NTKLW*FPRMLWMREQ*MS*FV  269
                WQVKLGNS V+QMR  +PG*  WS*LE K+S+KV + HLL V  LP+ RG  +MH Q +WT*GR *NTK W*FP+M WM+ Q* S*FV
Subject   7771  WQVKLGNSPVNQMRLLKPG*NRWS*LELKSSRKVLMHHLLSVAFLPNARGL*RMHFQRRWT*GRF*NTKRW*FPQMSWMKVQ*TS*FV  8034

Range 10: 7613 to 7741 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.3 bits(193) 0.0 35/43(81%) 0/43(0%) Minus/Plus
Query      299  LFYQGHWRINFD*KLWPK*GPCIHCEGSVGRFEGFRG*PYC*R  427
                L + GHWR+NF+*KL PK*GPCIHCEG V RFEGFRG*PYC*R
Subject   7613  LLH*GHWRVNFN*KLRPK*GPCIHCEGGVRRFEGFRG*PYC*R  7741

Range 11: 7862 to 8035 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.1 bits(175) 0.0 35/58(60%) 0/58(0%) Minus/Plus
Query        5  ARRFQYVTYS*WCACQA*EGDRKCTLKISGHEGGVETRNCGDFPECYG*GSNR*ADSC  178
                A RF   TYS W +CQ  E  R+CT K  GHEGG ETRN G+FP+C+G*  NR ADSC
Subject   7862  AGRF*CTTYSQWHSCQTQEDYRECTFKDGGHEGGFETRNGGNFPKCHG*RCNRRADSC  8035

Range 12: 7431 to 7532 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.2 bits(101) 0.0 22/34(65%) 0/34(0%) Minus/Plus
Query      508  NSPFPAQGYLGSLRTLCP*CLL*V*LHSYMYYLF  609
                ++P  A GY  +LR LCP*CL *V* HSYMY LF
Subject   7431  SNPSLALGYSANLRILCP*CLS*V*SHSYMYCLF  7532

Grapevine rupestris stem pitting associated virus isolate GRSPaV GG, complete genome

Sequence ID: JQ922417.1 Length: 8758 Number of Matches: 12

Range 1: 7581 to 8039 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
297.5 bits(643) 0.0 144/153(94%) 0/153(0%) Minus/Plus
Query        1  HVDSSSGDHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHTVEEIDYHC*IG*MASQIGKLPGESNEAFXXXXXXXXXXXXXXQPEGSNTSPTLSGVLAKRKRVIENALSKSVDMREVLKHETVVISPNVMDEGAIDELIRAF  459
                HVDSSSG+HQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVS  VEEIDYHC*IG*MASQIGKLPGESNEAFEARLK+LEL RAQKQPEGSN  PTLSG+LAKRKRVIENALSK+VDMREVLKHETVVISPNVMDEGAIDELIRAF
Subject   7581  HVDSSSGNHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVSRAVEEIDYHC*IG*MASQIGKLPGESNEAFEARLKSLELTRAQKQPEGSNAPPTLSGILAKRKRVIENALSKTVDMREVLKHETVVISPNVMDEGAIDELIRAF  8039

Range 2: 7427 to 7573 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
125.2 bits(267) 0.0 49/49(100%) 0/49(0%) Minus/Plus
Query      467  PKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSGLGRNCNCHPN  613
                PKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSGLGRNCNCHPN
Subject   7427  PKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSGLGRNCNCHPN  7573

Range 3: 7432 to 8034 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
373.6 bits(809) 0.0 155/201(77%) 0/201(0%) Plus/Minus
Query        6  HESAHLLLPHP*HSGKSPQFRVSTPPSCPLILRVHFRSPSYAWQAHH*E*VTYWNLLAVFGLELTPELLTGPRMPHLTHPGVSQFDLPFSQFNNDNQFLQQYG*PLKPSNLPTLPSQWMQGPHLGHNFQSKLIRQWP**NNLGDRRYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAIRPITSIKGTKFSDCPNIPELGKDC  608
                HESA LL  HP*H GKSP FRVS PPSCP  L+VH   PS  WQ  H*E*V + NL A F L LTP +L G + PHL H  VSQFDLPFSQFNNDNQFLQQ+G*PLKPSNLPT PSQW QGPHLG +FQSKL  QWP**+NLGD  YCCLHEQGFGWQLQFLPRPEFQTDNTCMNAI+P+TSIKGTKFSD P IPELGKDC
Subject   7432  HESARLLHLHP*HLGKSPPFRVSKPPSCPPFLKVHSL*PSCVWQECH*E*VVH*NLPAAFEL*LTPAILAGLQKPHLIHRVVSQFDLPFSQFNNDNQFLQQHG*PLKPSNLPTPPSQWTQGPHLGRSFQSKLTLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAIKPMTSIKGTKFSDWPKIPELGKDC  8034

Range 4: 7433 to 7804 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
243.0 bits(524) 0.0 108/124(87%) 0/124(0%) Plus/Minus
Query      236  DSPGSFPI*LAI*PIQQ**SISSTVWLTPKAFKPPNTSFTVDARASLGPQFSIKIDSPVALIKQPW*SPLLLST*ARIWMAITIPTKTRIPNR*YMYECNQTYNKH*GHKVLRLPKYP*AGKGL  607
                DSPGSFPI*LAI PI Q**SISST  LTPKAFKPPNTSFTVDARASLGPQFSIKIDSPVAL+KQPW* PLLLST*ARIWMAITIPTKTRIPNR YMYEC+ TY+KH*GHK+LRL + P AG+GL
Subject   7433  DSPGSFPI*LAIQPI*Q**SISSTARLTPKAFKPPNTSFTVDARASLGPQFSIKIDSPVALMKQPW*LPLLLST*ARIWMAITIPTKTRIPNRQYMYECD*TYDKH*GHKILRLAENPRAGEGL  7804

Range 5: 7859 to 7999 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
94.5 bits(200) 0.0 41/47(87%) 0/47(0%) Plus/Minus
Query       41  TFGEITTVSCFNTSLMSTDFESAFSITLLRLASTPLRVGDVLEPSGC  181
                TFGEITTVSCF TSLMST FESAFSITLLRLA  PLRVG  LEPSGC
Subject   7859  TFGEITTVSCFKTSLMSTVFESAFSITLLRLARMPLRVGGALEPSGC  7999

Range 6: 7437 to 7826 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
229.3 bits(494) 0.0 100/130(77%) 0/130(0%) Plus/Minus
Query      214  PGLECLI*LTREFPNLTCHLANSTMIINFFNSMANP*SLQTSQHFLHSGCKGLTWATIFNQN*FASGPDKTTLVIAATAVYMSKDLDGNYNSYQDQNSKQIIHV*MQSDL*QALRAQSSQTAQISLSWER  603
                PG + LI* T  FPNLTCH AN TMIINFFNS ANP*SLQTSQH LHSG KGLTWA +FNQN* +SGP++ TLVIA TAVYMSKDLDGNYNSYQDQNSKQ IHV*M+ +L*QALRAQ+SQ  + S SW R
Subject   7437  PGFKSLI*FTG*FPNLTCHSANLTMIINFFNSTANP*SLQTSQHLLHSGRKGLTWAAVFNQN*LSSGPNEATLVIATTAVYMSKDLDGNYNSYQDQNSKQTIHV*MRLNL*QALRAQNSQIGRKSQSWGR  7826

Range 7: 7884 to 8039 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.4 bits(191) 0.0 34/52(65%) 0/52(0%) Plus/Minus
Query        1  KSTNQLIYCSLIHNIRGNHHSFVFQHLPHVH*F*ECIFDHPLTLGKHTTKSR  156
                K TNQL+YC+ IH+I GNHH FVFQ+LPHVH F*+CI  +PL  GK+ T+SR
Subject   7884  KCTNQLVYCTFIHDIWGNHHRFVFQNLPHVHRF*KCILYNPLAFGKNATESR  8039

Range 8: 7435 to 7713 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
161.0 bits(345) 0.0 70/93(75%) 0/93(0%) Minus/Plus
Query      327  VLSQLRDIWAV*ELCALNACYRSDCIHTCIICLEFWSW*EL*LPSKSLLM*TAVAAITKVVLSGPLANQF*LKIVAQVRPLHPL*RKCWEV*R  605
                +L QL D   +*E CALNAC+R + IHTCI+CLEFWSW*EL*LPSKSLLM*TAV AITKV   GPL +QF*LK  AQVRPL PL*R+CWEV*R
Subject   7435  ILPQLWDFRPI*EFCALNACHRFNRIHTCIVCLEFWSW*EL*LPSKSLLM*TAVVAITKVASLGPLESQF*LKTAAQVRPLRPL*RRCWEV*R  7713

Range 9: 7771 to 8034 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.0 bits(262) 0.0 56/88(64%) 0/88(0%) Minus/Plus
Query        6  WQVKLGNSRVSQMRHSRPG*KLWS*LEPKNSQKVPIRHLLLVVCLPSVRG*SKMHSQNQWT*GRC*NTKLW*FPRMLWMREQ*MS*FV  269
                WQVKLGN  V+QMR  +PG*  WS*LE K+S+KV + HLL V  LP+ RG  +MH Q +WT*GR *NTK W*FP+M WM+ Q* S*FV
Subject   7771  WQVKLGNYPVNQMRLLKPG*NRWS*LELKSSRKVLMHHLLSVAFLPNARGL*RMHFQKRWT*GRF*NTKRW*FPQMSWMKVQ*TS*FV  8034

Range 10: 7613 to 7741 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.7 bits(196) 0.0 35/43(81%) 0/43(0%) Minus/Plus
Query      299  LFYQGHWRINFD*KLWPK*GPCIHCEGSVGRFEGFRG*PYC*R  427
                L + GHWR+NFD*KL PK*GPC+HCEG VGRFEGFRG*P C*R
Subject   7613  LLH*GHWRVNFD*KLRPK*GPCVHCEGGVGRFEGFRG*PCC*R  7741

Range 11: 7862 to 8035 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
88.6 bits(187) 0.0 37/58(64%) 0/58(0%) Minus/Plus
Query        5  ARRFQYVTYS*WCACQA*EGDRKCTLKISGHEGGVETRNCGDFPECYG*GSNR*ADSC  178
                A RF   TYS W +CQ  EG R+CT K  GHEGG ETRN GDFP+C+G*  NR ADSC
Subject   7862  AGRF*CTTYSQWHSCQTQEGYRECTFKNGGHEGGFETRNGGDFPKCHG*RCNRRADSC  8035

Range 12: 7431 to 7532 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.9 bits(107) 0.0 22/34(65%) 0/34(0%) Minus/Plus
Query      508  NSPFPAQGYLGSLRTLCP*CLL*V*LHSYMYYLF  609
                ++P PA G+  +LR LCP*CL *V* HSYMY LF
Subject   7431  SNPSPALGFSANLRILCP*CLS*V*SHSYMYCLF  7532

Grapevine rupestris stem pitting associated virus complete genome, isolate PG, genomic RNA

Sequence ID: HE591388.1 Length: 8725 Number of Matches: 12

Range 1: 7581 to 8039 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
297.5 bits(643) 0.0 145/153(95%) 0/153(0%) Minus/Plus
Query        1  HVDSSSGDHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHTVEEIDYHC*IG*MASQIGKLPGESNEAFXXXXXXXXXXXXXXQPEGSNTSPTLSGVLAKRKRVIENALSKSVDMREVLKHETVVISPNVMDEGAIDELIRAF  459
                HVDSSSG+HQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVS  VEEIDYHC*IG*MASQIGKLPGESNEAFEARLK+LELARAQKQPEGSN  PTLSG+LAKRKRVIENALSK+VDMREVLKHETVVISPNVMDEGAIDELIRAF
Subject   7581  HVDSSSGNHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVSRAVEEIDYHC*IG*MASQIGKLPGESNEAFEARLKSLELARAQKQPEGSNAPPTLSGILAKRKRVIENALSKTVDMREVLKHETVVISPNVMDEGAIDELIRAF  8039

Range 2: 7427 to 7573 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
125.2 bits(267) 0.0 49/49(100%) 0/49(0%) Minus/Plus
Query      467  PKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSGLGRNCNCHPN  613
                PKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSGLGRNCNCHPN
Subject   7427  PKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSGLGRNCNCHPN  7573

Range 3: 7432 to 8034 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
372.7 bits(807) 0.0 156/201(78%) 0/201(0%) Plus/Minus
Query        6  HESAHLLLPHP*HSGKSPQFRVSTPPSCPLILRVHFRSPSYAWQAHH*E*VTYWNLLAVFGLELTPELLTGPRMPHLTHPGVSQFDLPFSQFNNDNQFLQQYG*PLKPSNLPTLPSQWMQGPHLGHNFQSKLIRQWP**NNLGDRRYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAIRPITSIKGTKFSDCPNIPELGKDC  608
                HESA LL  HP*H GKSP FRVS PPSCP  L+VH   PS  WQ  H*E*V + NL A F L  TP +L G R PHL H GVSQFDLPFSQFNNDNQFLQQ+G*PLKPSNL T PSQWMQGPHL  +F+SKL  QWP**+NLGD  YCCLHEQGFGWQLQFLPRPEFQTDNTCMNAIRP+TSIKGTKFSD PNIPELGKDC
Subject   7432  HESARLLHLHP*HLGKSPPFRVSKPPSCPPSLKVHSL*PSCVWQECH*E*VVH*NLPAAFEL*PTPAILAGLRKPHLIHRGVSQFDLPFSQFNNDNQFLQQHG*PLKPSNLLTPPSQWMQGPHLDRSFRSKLTLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAIRPMTSIKGTKFSDWPNIPELGKDC  8034

Range 4: 7433 to 7804 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
249.4 bits(538) 0.0 110/124(89%) 0/124(0%) Plus/Minus
Query      236  DSPGSFPI*LAI*PIQQ**SISSTVWLTPKAFKPPNTSFTVDARASLGPQFSIKIDSPVALIKQPW*SPLLLST*ARIWMAITIPTKTRIPNR*YMYECNQTYNKH*GHKVLRLPKYP*AGKGL  607
                DSPGSFPI*LAI*PI Q**SISST  LTPKAFKPPNTSFTVDARASLGPQFSIKIDSPVAL+KQPW* PLLLST*ARIWMAITIPTKTRIPNR YMYEC+ TY+KH*GHK+LRL +YP AG+GL
Subject   7433  DSPGSFPI*LAI*PI*Q**SISSTARLTPKAFKPPNTSFTVDARASLGPQFSIKIDSPVALMKQPW*LPLLLST*ARIWMAITIPTKTRIPNRQYMYECD*TYDKH*GHKILRLAEYPRAGEGL  7804

Range 5: 7859 to 7999 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
94.5 bits(200) 0.0 41/47(87%) 0/47(0%) Plus/Minus
Query       41  TFGEITTVSCFNTSLMSTDFESAFSITLLRLASTPLRVGDVLEPSGC  181
                TFGEITTVSCF TSLMST FESAFSITLLRLA  PLRVG  LEPSGC
Subject   7859  TFGEITTVSCFKTSLMSTVFESAFSITLLRLARMPLRVGGALEPSGC  7999

Range 6: 7437 to 7826 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
240.7 bits(519) 0.0 103/130(79%) 0/130(0%) Plus/Minus
Query      214  PGLECLI*LTREFPNLTCHLANSTMIINFFNSMANP*SLQTSQHFLHSGCKGLTWATIFNQN*FASGPDKTTLVIAATAVYMSKDLDGNYNSYQDQNSKQIIHV*MQSDL*QALRAQSSQTAQISLSWER  603
                PG E LI* T EFPNLTCHLAN TMIINFFNS ANP*SLQTS H LHSGCKGLTW  +F+QN* +SGP++ TLVIA TAVYMSKDLDGNYNSYQDQNSKQ IHV*M+ DL*QALRAQ+SQ  +IS SW R
Subject   7437  PGFESLI*FTGEFPNLTCHLANLTMIINFFNSTANP*SLQTS*HLLHSGCKGLTWTAVFDQN*LSSGPNEATLVIATTAVYMSKDLDGNYNSYQDQNSKQTIHV*MRLDL*QALRAQNSQIGRISQSWGR  7826

Range 7: 7884 to 8039 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
87.7 bits(185) 0.0 33/52(63%) 0/52(0%) Plus/Minus
Query        1  KSTNQLIYCSLIHNIRGNHHSFVFQHLPHVH*F*ECIFDHPLTLGKHTTKSR  156
                K TNQL+YC+ IH+I GNHH FVFQ+LPHVH  *+CI  +PL  GK+ T+SR
Subject   7884  KCTNQLVYCTFIHDIWGNHHRFVFQNLPHVHRL*KCILYNPLAFGKNATESR  8039

Range 8: 7435 to 7713 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
157.8 bits(338) 0.0 70/93(75%) 0/93(0%) Minus/Plus
Query      327  VLSQLRDIWAV*ELCALNACYRSDCIHTCIICLEFWSW*EL*LPSKSLLM*TAVAAITKVVLSGPLANQF*LKIVAQVRPLHPL*RKCWEV*R  605
                +L QL DI  +*E CALNAC+RS+ IHTCI+CLEFWSW*EL*LPSKSLLM*TAV AITKV   GPL +QF* K   QVRPLHPL*R+C EV*R
Subject   7435  ILPQLWDIRPI*EFCALNACHRSNRIHTCIVCLEFWSW*EL*LPSKSLLM*TAVVAITKVASLGPLESQF*SKTAVQVRPLHPL*RRC*EV*R  7713

Range 9: 7771 to 8034 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
126.2 bits(269) 0.0 57/88(65%) 0/88(0%) Minus/Plus
Query        6  WQVKLGNSRVSQMRHSRPG*KLWS*LEPKNSQKVPIRHLLLVVCLPSVRG*SKMHSQNQWT*GRC*NTKLW*FPRMLWMREQ*MS*FV  269
                WQVKLGNS V+QMR S+PG*  WS LE K+S+KV + HLL V  LP+ RG  +MH Q +WT*GR *NTK W*FP+M WM+ Q* S*FV
Subject   7771  WQVKLGNSPVNQMRLSKPG*NRWSWLELKSSRKVLMHHLLSVAFLPNARGL*RMHFQRRWT*GRF*NTKRW*FPQMSWMKVQ*TS*FV  8034

Range 10: 7862 to 8035 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
88.6 bits(187) 0.0 37/58(64%) 0/58(0%) Minus/Plus
Query        5  ARRFQYVTYS*WCACQA*EGDRKCTLKISGHEGGVETRNCGDFPECYG*GSNR*ADSC  178
                A RF   TYS W +CQ  EG R+CT K  GHEGG ETRN GDFP+C+G*  NR ADSC
Subject   7862  AGRF*CTTYSQWHSCQTQEGYRECTFKDGGHEGGFETRNGGDFPKCHG*RCNRRADSC  8035

Range 11: 7613 to 7741 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.5 bits(176) 0.0 33/43(77%) 0/43(0%) Minus/Plus
Query      299  LFYQGHWRINFD*KLWPK*GPCIHCEGSVGRFEGFRG*PYC*R  427
                L + GHWR+NFD KL  K*GPCIHCEG V RFEGFRG*P C*R
Subject   7613  LLH*GHWRVNFDRKLRSK*GPCIHCEGGVRRFEGFRG*PCC*R  7741

Range 12: 7431 to 7532 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.8 bits(111) 0.0 23/34(68%) 0/34(0%) Minus/Plus
Query      508  NSPFPAQGYLGSLRTLCP*CLL*V*LHSYMYYLF  609
                ++P PA GY  +LR LCP*CL *V* HSYMY LF
Subject   7431  SNPSPALGYSANLRILCP*CLS*V*SHSYMYCLF  7532

Nucleotide Sequence (1006 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 33 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
101
202
303
404
505
606
707
808
909
1006

Descriptions

Alignments

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OB1

Sequence ID: AB277783.1 Length: 2876 Number of Matches: 17

Range 1: 1837 to 2373 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
398.8 bits(864) 0.0 169/179(94%) 0/179(0%) Minus/Plus
Query      223  HVDSNDGDHQGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HC*MASPPGKLPGESNEAFEARLKSLELARAQKQPTGSNQPPTLGGVLAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIARHCSVVGS  759
                HVDSN+GD+ GCLIRATGESILIENCGPSEALAST+KEVLGGLKALGVSHIGEEIDYHC*HC MASPPG+LPGESNEAFEARLKSLELARAQKQP GSNQPP LGG+LAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIARHCS VGS
Subject   1837  HVDSNNGDNHGCLIRATGESILIENCGPSEALASTIKEVLGGLKALGVSHIGEEIDYHC*HCHMASPPGRLPGESNEAFEARLKSLELARAQKQPEGSNQPPVLGGILAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIARHCSDVGS  2373

Range 2: 1717 to 1788 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.8 bits(85) 0.0 17/24(71%) 0/24(0%) Minus/Plus
Query      808  LGMTVLCL**L**F*QPPYMYYLF  879
                + + +LCL**L**+*+PPYMYYLF
Subject   1717  VSLRILCL**L**Y*RPPYMYYLF  1788

Range 3: 2022 to 2375 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
255.4 bits(551) 0.0 109/118(92%) 0/118(0%) Plus/Minus
Query      221  KLPTTEQWRAISIATLN*SLSDMPDSPNARINSSIAPSSMTFGDSTTDSCFNTSRMSTVFERAFSITLFLLARTPPRVGGWLEPVGCF*ALASSKDFSLASKASFDSPGNFPGGLAI*  574
                +LPT+EQWRAISIATLN*SLSDMPDSPNARINSSIAPSS+T GDSTTDSCFNTSRMSTVFERAFS+TLFLLAR PPR GGWLEP GCF*ALASSKDFSLASKASFDSPGN PGGLAI*
Subject   2022  ELPTSEQWRAISIATLN*SLSDMPDSPNARINSSIAPSSITLGDSTTDSCFNTSRMSTVFERAFSMTLFLLARMPPRTGGWLEPSGCF*ALASSKDFSLASKASFDSPGNLPGGLAI*  2375

Range 4: 1836 to 1991 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
114.7 bits(244) 0.0 49/52(94%) 0/52(0%) Plus/Minus
Query      605  PIWLTPKAFKPPNTSLTVEASASLGPQFSINIDSPVALMRQP**SPSLLSTC  760
                PIWLTPKAFKPPNTSL VEASASLGPQFSINIDSPVALMRQP* SP LLSTC
Subject   1836  PIWLTPKAFKPPNTSLIVEASASLGPQFSINIDSPVALMRQP*LSPLLLSTC  1991

Range 5: 1724 to 1801 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.1 bits(114) 0.0 23/26(88%) 0/26(0%) Plus/Minus
Query      795  EPEFQTDSTYMEAVKTITIIKGTRQS  872
                EPEFQTDSTYMEAV TITIIKGT+ S
Subject   1724  EPEFQTDSTYMEAVNTITIIKGTKFS  1801

Range 6: 1720 to 2379 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
367.6 bits(796) 0.0 180/220(82%) 0/220(0%) Plus/Minus
Query      217  LQAANNRTMACNIYCNVKLITL*YARLTECSNQLIYCTFIHDIWR*HNRFMLQHLSHVHSF*KSILNNPLSFSKDTTKGXXXXXXXXXXXXPCQLQRFQSGLKSFI*LTRQLSWWARHLTMSTMIINFFTNMANP*SLQTP*HFLNC*SERLTWATIFN*Y*LPSGSYETTLMITIIAVYMCKD*GCNYNAY*NQNSKQIVHIWRXXXXXXXXXAQDSHS  876
                L+A N R MACNIY NVKLI L*YARLTECSNQLIYCTFIH+I R*HNR +LQHL HVHSF*KSI N+PLSFSK+ TK RRLVRT RLLLS CQLQRFQSGLKSFI*LT Q SWWARH+TM TMIINFFTNMANP*SLQT  HFLNC*S+RLTWATI N*Y*LP   YETT++ITIIAV MCKD*GCN +AY NQNSKQIVHIWR L LLQLLKAQ+S +
Subject   1720  LRATNVRAMACNIYRNVKLIAL*YARLTECSNQLIYCTFIHNIRR*HNRLVLQHLPHVHSF*KSIFNDPLSFSKNATKNRRLVRTFRLLLSSCQLQRFQSGLKSFI*LTWQPSWWARHMTMLTMIINFFTNMANP*SLQTSQHFLNC*SKRLTWATILN*Y*LPCSPYETTMIITIIAVDMCKD*GCNCSAYKNQNSKQIVHIWRPLILLQLLKAQNSQT  2379

Range 7: 1734 to 2369 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
344.3 bits(745) 0.0 178/212(84%) 0/212(0%) Minus/Plus
Query      227  VPLIIVIVLTASIYVLSVWNSGSSXXXXXXXXXXXXRQQ*W*SSRLSHKSHWGVNIN*KLWPK*GARFNS*GSVRGFEGFRG*PYW*RNXXXXXXXLDGEPTRKVAG*VK*SF*GQTEIFGAGKGSKAAYWF*PTSYPWWCPC*KKEGY*ECSFKNCGHARGVEA*ICCAISKCHG*RCNR*VDSSIR*VWHIRE*SI*RCNRYCTPLFCCW  862
                VPLIIVIVLTASIYVLSVWNSGS RRCNCNPNPCTCRQQ*W* S LSHK + GVNIN*+LWPK*GA FN+*GSV  FEGFRG*PYW*RN*LSLLTL  GEPTRKVA *VK*SF*GQTEIFGAGK SKAA  F*PTS  WW  C*KKEG+*+CSFKNCGHA GVEA +CCAIS C+G*RCNR*VDSSIR*VWHIRE S+*RC+RYCTPL   W
Subject   1734  VPLIIVIVLTASIYVLSVWNSGSCRRCNCNPNPCTCRQQ*W**SWLSHKGYRGVNIN*ELWPK*GACFNN*GSVGRFEGFRG*PYW*RN*LSLLTLSYGEPTRKVAR*VK*SF*GQTEIFGAGKSSKAA*RF*PTSCSWWHSC*KKEGH*KCSFKNCGHAGGVEARVCCAIS*CYG*RCNR*VDSSIR*VWHIRERSV*RCDRYCTPLL*RW  2369

Range 8: 1889 to 2248 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
229.7 bits(495) 0.0 102/120(85%) 0/120(0%) Plus/Minus
Query      348  EIAQQIHASTPLACPQFLKEHSQ*PSFF*QGHHQG*EVG*NQ*AAFEPLPAPKISVWPQKLHLTHPATFLVGSPSNNVNNDNQFLHQYG*PLKPSNPLTLP*LLKRAPHLGHNFQLILTP  707
                EIAQQ  ASTP ACPQFLKEH Q*PSFF*Q  HQ  EVG*N  AAFE LPAPKISVWPQKLHLTH ATFLVGSP +NVNNDNQFLHQYG*PLKPSN  TLP*LLK+APHLGHN QLILTP
Subject   1889  EIAQQTRASTPPACPQFLKEHFQ*PSFF*QECHQEQEVG*NLQAAFELLPAPKISVWPQKLHLTHLATFLVGSPYDNVNNDNQFLHQYG*PLKPSNLPTLP*LLKQAPHLGHNSQLILTP  2248

Range 9: 2279 to 2374 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.1 bits(127) 0.0 26/32(81%) 0/32(0%) Plus/Minus
Query      222  SCQQQNNGVQYLLQR*IDHSLICQTHRMLEST  317
                S Q+Q+NGVQYL QR* D SLICQTHRMLEST
Subject   2279  SYQRQSNGVQYLSQR*TDRSLICQTHRMLEST  2374

Range 10: 1769 to 1984 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
120.2 bits(256) 0.0 60/72(83%) 0/72(0%) Minus/Plus
Query      612  HICTICLEFWF**AL*LQP*SLHM*TAMMVIIKVVS*EPLGSQY*LKIVAQVRRSLQQLRKC*GV*RL*GLA  827
                HICTICLEFWF *AL LQP*SLHM TA+MVII VVS*   GSQY*L+IVAQVRR LQQLRKC  V*RL*GLA
Subject   1769  HICTICLEFWFL*ALQLQP*SLHMSTAIMVIIMVVS*GLQGSQY*LRIVAQVRRLLQQLRKCWEV*RL*GLA  1984

Range 11: 2165 to 2332 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
111.0 bits(236) 0.0 47/56(84%) 0/56(0%) Minus/Plus
Query      264  KERGLLRMLFQKLWTCERC*SMNLLCYLQMSWMKVQ*MS*FEHSVSLAYQRVINLT  431
                KERG L+MLFQKLWTC RC*S +LLCYL M WMKVQ*MS*FEHSVSLAYQR I+LT
Subject   2165  KERGSLKMLFQKLWTCGRC*STSLLCYLLMLWMKVQ*MS*FEHSVSLAYQRAISLT  2332

Range 12: 2027 to 2104 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
66.6 bits(139) 0.0 24/26(92%) 0/26(0%) Minus/Plus
Query      492  WRAHQESCRVSQMKLLRPD*NLWSWQ  569
                WRAHQE C+VSQMKLLRPD*NLWSWQ
Subject   2027  WRAHQEGCQVSQMKLLRPD*NLWSWQ  2104

Range 13: 1680 to 1826 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
105.1 bits(223) 0.0 41/49(84%) 0/49(0%) Plus/Plus
Query      858  GTRQSFPNTGLYGQSQNIVPLIIVIVLTASIYVLSVWNSGSSRRCNCNP  1004
                G +QSFP++GL+GQS+N VPLIIVIVLTASIYVLSVWNSGS RRCNCNP
Subject   1680  GPKQSFPSSGLFGQSENFVPLIIVIVLTASIYVLSVWNSGSCRRCNCNP  1826

Range 14: 1685 to 1828 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
96.8 bits(205) 0.0 38/48(79%) 0/48(0%) Plus/Plus
Query      863  KTVIPKHWALWSVSEHCASNNCNSFNSLHICTICLEFWF**AMQLQP*  1006
                +TVIPK WA WSV E CA NNCNS N LHICTICLEFWF *A+QLQP*
Subject   1685  QTVIPKLWAFWSV*EFCAFNNCNSINGLHICTICLEFWFL*ALQLQP*  1828

Range 15: 1658 to 1828 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
93.6 bits(198) 0.0 40/57(70%) 0/57(0%) Minus/Minus
Query      836  LGLQLHRLLEPEFQTDSTYMEAVKTITIIRGTMF*D*P*SPVFGNDCLVPLIIVIVL  1006
                LGLQL RL EPEFQTDSTYMEAV TITII+GT F D*P SP  GNDCL P  +++++
Subject   1658  LGLQLQRLQEPEFQTDSTYMEAVNTITIIKGTKFSD*PKSPELGNDCLGPQYVMLLV  1828

Range 16: 1687 to 1827 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.9 bits(179) 0.0 39/47(83%) 0/47(0%) Plus/Plus
Query      865  DSHSQTLGFMVSLRTLCL**L**F*QPPYMYYLSGILVLVGDAIATL  1005
                +SHSQ LGF+VSLR LCL**L**+*+PPYMYYL GILVLVG AIATL
Subject   1687  NSHSQALGFLVSLRILCL**L**Y*RPPYMYYLFGILVLVGAAIATL  1827

Range 17: 1687 to 1827 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.0 bits(153) 0.0 37/47(79%) 0/47(0%) Minus/Minus
Query      865  *GCNCIAY*NQNSRQIVHIWRXXXXXXXLEAQCSETDHKAQCLGMTV  1005
                *GCNC AY NQNS+QIVHIWR L LLQLL+AQ S+TD KAQ LGMTV
Subject   1687  *GCNCSAYKNQNSKQIVHIWRPLILLQLLKAQNSQTDQKAQSLGMTV  1827

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 17

Range 1: 7581 to 8117 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
399.3 bits(865) 0.0 170/179(95%) 0/179(0%) Minus/Plus
Query      223  HVDSNDGDHQGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HC*MASPPGKLPGESNEAFEARLKSLELARAQKQPTGSNQPPTLGGVLAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIARHCSVVGS  759
                HVDSN+GD+ GCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HC MASPPG+LPGESNEAFEARLKSLELARAQKQP GSNQPP LGG+LAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIARHCS VGS
Subject   7581  HVDSNNGDNHGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HCHMASPPGRLPGESNEAFEARLKSLELARAQKQPEGSNQPPVLGGILAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIARHCSDVGS  8117

Range 2: 7461 to 7532 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.7 bits(76) 0.0 16/24(67%) 0/24(0%) Minus/Plus
Query      808  LGMTVLCL**L**F*QPPYMYYLF  879
                + + +LCL**L**+*+ PYMYYLF
Subject   7461  VSLRILCL**L**Y*RHPYMYYLF  7532

Range 3: 7766 to 8119 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
255.4 bits(551) 0.0 109/118(92%) 0/118(0%) Plus/Minus
Query      221  KLPTTEQWRAISIATLN*SLSDMPDSPNARINSSIAPSSMTFGDSTTDSCFNTSRMSTVFERAFSITLFLLARTPPRVGGWLEPVGCF*ALASSKDFSLASKASFDSPGNFPGGLAI*  574
                +LPT+EQWRAISIATLN*SLSDMPDSPNARINSSIAPSS+T GDSTTDSCFNTSRMSTVFERAFS+TLFLLAR PPR GGWLEP GCF*ALASSKDFSLASKASFDSPGN PGGLAI*
Subject   7766  ELPTSEQWRAISIATLN*SLSDMPDSPNARINSSIAPSSITLGDSTTDSCFNTSRMSTVFERAFSMTLFLLARMPPRTGGWLEPSGCF*ALASSKDFSLASKASFDSPGNLPGGLAI*  8119

Range 4: 7580 to 7735 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
115.2 bits(245) 0.0 49/52(94%) 0/52(0%) Plus/Minus
Query      605  PIWLTPKAFKPPNTSLTVEASASLGPQFSINIDSPVALMRQP**SPSLLSTC  760
                PIWLTPKAFKPP+TSLTVEASASLGPQFSINIDSPVALMRQP* SP LLSTC
Subject   7580  PIWLTPKAFKPPSTSLTVEASASLGPQFSINIDSPVALMRQP*LSPLLLSTC  7735

Range 5: 7468 to 7545 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.8 bits(111) 0.0 22/26(85%) 0/26(0%) Plus/Minus
Query      795  EPEFQTDSTYMEAVKTITIIKGTRQS  872
                EPEFQTDSTYM+AV TITIIKGT+ S
Subject   7468  EPEFQTDSTYMDAVNTITIIKGTKFS  7545

Range 6: 7464 to 8123 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
358.5 bits(776) 0.0 176/220(80%) 0/220(0%) Plus/Minus
Query      217  LQAANNRTMACNIYCNVKLITL*YARLTECSNQLIYCTFIHDIWR*HNRFMLQHLSHVHSF*KSILNNPLSFSKDTTKGXXXXXXXXXXXXPCQLQRFQSGLKSFI*LTRQLSWWARHLTMSTMIINFFTNMANP*SLQTP*HFLNC*SERLTWATIFN*Y*LPSGSYETTLMITIIAVYMCKD*GCNYNAY*NQNSKQIVHIWRXXXXXXXXXAQDSHS  876
                L+A + R MACNIY NVKLI L*YARLTECSNQLIYCTFIH+I R*HNR +LQHL HVHSF*KSI N+PL F K+ TK RRLVRT RLLLS CQLQRFQSGLKSFI*LT Q SWWARH+TM TMIINFFTNMANP*SLQT  HFLNC*S+RLTWATI N*Y*LP   YETT++ITIIAV MCKD*GCN +AY NQNSKQIVHIW  L LLQLLKAQ+S +
Subject   7464  LRATDIRAMACNIYRNVKLIAL*YARLTECSNQLIYCTFIHNIRR*HNRLVLQHLPHVHSF*KSIFNDPLPFGKNATKNRRLVRTFRLLLSSCQLQRFQSGLKSFI*LTWQPSWWARHMTMLTMIINFFTNMANP*SLQTSQHFLNC*SKRLTWATILN*Y*LPCSPYETTMIITIIAVDMCKD*GCNCSAYKNQNSKQIVHIWMPLILLQLLKAQNSQT  8123

Range 7: 7478 to 8110 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
340.1 bits(736) 0.0 176/211(83%) 0/211(0%) Minus/Plus
Query      230  VPLIIVIVLTASIYVLSVWNSGSSXXXXXXXXXXXXRQQ*W*SSRLSHKSHWGVNIN*KLWPK*GARFNS*GSVRGFEGFRG*PYW*RNXXXXXXXLDGEPTRKVAG*VK*SF*GQTEIFGAGKGSKAAYWF*PTSYPWWCPC*KKEGY*ECSFKNCGHARGVEA*ICCAISKCHG*RCNR*VDSSIR*VWHIRE*SI*RCNRYCTPLFCC  862
                VPLIIVIVLTASIYVLSVWNSGS RRCNCNPNPCTCRQQ*W* S LSHK + GVNIN*+LWPK*GA FNS*GS   FEGFRG*PYW*RN*LSLLTL  GEPTRKVA *VK*SF*GQTEIFGAGK SKAA  F*PTS  WW  C K+EG+*+CSFKNCGHA GVEA +CCAIS C+G*RCNR*VDSSIR*VWHIRE S+*RC+RYCTPL  C
Subject   7478  VPLIIVIVLTASIYVLSVWNSGSCRRCNCNPNPCTCRQQ*W**SWLSHKGYRGVNIN*ELWPK*GACFNS*GSAGRFEGFRG*PYW*RN*LSLLTLSYGEPTRKVAR*VK*SF*GQTEIFGAGKSSKAA*RF*PTSCSWWHSCQKEEGH*KCSFKNCGHAGGVEARVCCAIS*CYG*RCNR*VDSSIR*VWHIRERSV*RCDRYCTPLL*C  8110

Range 8: 7633 to 7992 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
221.5 bits(477) 0.0 99/120(82%) 0/120(0%) Plus/Minus
Query      348  EIAQQIHASTPLACPQFLKEHSQ*PSFF*QGHHQG*EVG*NQ*AAFEPLPAPKISVWPQKLHLTHPATFLVGSPSNNVNNDNQFLHQYG*PLKPSNPLTLP*LLKRAPHLGHNFQLILTP  707
                EIAQQ  ASTP ACPQFLKEH Q*PS F Q  HQ  EVG*N  AAFE LPAPKISVWPQKLHLTH ATFLVGSP +NVNNDNQFLHQYG*PLKPSN   LP*LLK+APHLGHN QLILTP
Subject   7633  EIAQQTRASTPPACPQFLKEHFQ*PSSFWQECHQEQEVG*NLQAAFELLPAPKISVWPQKLHLTHLATFLVGSPYDNVNNDNQFLHQYG*PLKPSNLPALP*LLKQAPHLGHNSQLILTP  7992

Range 9: 8023 to 8118 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.8 bits(122) 0.0 25/32(78%) 0/32(0%) Plus/Minus
Query      222  SCQQQNNGVQYLLQR*IDHSLICQTHRMLEST  317
                S + Q+NGVQYL QR* D SLICQTHRMLEST
Subject   8023  SYRHQSNGVQYLSQR*TDRSLICQTHRMLEST  8118

Range 10: 7513 to 7728 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
120.2 bits(256) 0.0 60/72(83%) 0/72(0%) Minus/Plus
Query      612  HICTICLEFWF**AL*LQP*SLHM*TAMMVIIKVVS*EPLGSQY*LKIVAQVRRSLQQLRKC*GV*RL*GLA  827
                HICTICLEFWF *AL LQP*SLHM TA+MVII VVS*   GSQY*L+IVAQVRR LQQLRKC  V*RL*GLA
Subject   7513  HICTICLEFWFL*ALQLQP*SLHMSTAIMVIIMVVS*GLQGSQY*LRIVAQVRRLLQQLRKCWEV*RL*GLA  7728

Range 11: 7909 to 8076 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
107.8 bits(229) 0.0 46/56(82%) 0/56(0%) Minus/Plus
Query      264  KERGLLRMLFQKLWTCERC*SMNLLCYLQMSWMKVQ*MS*FEHSVSLAYQRVINLT  431
                K RG L+MLFQKLWTC RC*S +LLCYL M WMKVQ*MS*FEHSVSLAYQR I+LT
Subject   7909  KGRGSLKMLFQKLWTCGRC*STSLLCYLLMLWMKVQ*MS*FEHSVSLAYQRAISLT  8076

Range 12: 7771 to 7848 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
66.6 bits(139) 0.0 24/26(92%) 0/26(0%) Minus/Plus
Query      492  WRAHQESCRVSQMKLLRPD*NLWSWQ  569
                WRAHQE C+VSQMKLLRPD*NLWSWQ
Subject   7771  WRAHQEGCQVSQMKLLRPD*NLWSWQ  7848

Range 13: 7424 to 7570 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
105.1 bits(223) 0.0 41/49(84%) 0/49(0%) Plus/Plus
Query      858  GTRQSFPNTGLYGQSQNIVPLIIVIVLTASIYVLSVWNSGSSRRCNCNP  1004
                G +QSFP++GL+GQS+N VPLIIVIVLTASIYVLSVWNSGS RRCNCNP
Subject   7424  GPKQSFPSSGLFGQSENFVPLIIVIVLTASIYVLSVWNSGSCRRCNCNP  7570

Range 14: 7429 to 7572 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
97.7 bits(207) 0.0 38/48(79%) 0/48(0%) Plus/Plus
Query      863  KTVIPKHWALWSVSEHCASNNCNSFNSLHICTICLEFWF**AMQLQP*  1006
                +TVIPK WALWSV E CA NNCNS N +HICTICLEFWF *A+QLQP*
Subject   7429  QTVIPKLWALWSV*EFCAFNNCNSINGIHICTICLEFWFL*ALQLQP*  7572

Range 15: 7402 to 7572 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.3 bits(195) 0.0 39/57(68%) 0/57(0%) Minus/Minus
Query      836  LGLQLHRLLEPEFQTDSTYMEAVKTITIIRGTMF*D*P*SPVFGNDCLVPLIIVIVL  1006
                LGLQL RL EPEFQTDSTYM+AV TITII+GT F D*P SP  GNDCL P  +++++
Subject   7402  LGLQLQRLQEPEFQTDSTYMDAVNTITIIKGTKFSD*PKSPELGNDCLGPQYVMLLV  7572

Range 16: 7431 to 7571 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
77.1 bits(162) 0.0 37/47(79%) 0/47(0%) Plus/Plus
Query      865  DSHSQTLGFMVSLRTLCL**L**F*QPPYMYYLSGILVLVGDAIATL  1005
                +SHSQ LG +VSLR LCL**L**+*+ PYMYYL GILVLVG AIATL
Subject   7431  NSHSQALGSLVSLRILCL**L**Y*RHPYMYYLFGILVLVGAAIATL  7571

Range 17: 7431 to 7571 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.9 bits(144) 0.0 35/47(74%) 0/47(0%) Minus/Minus
Query      865  *GCNCIAY*NQNSRQIVHIWRXXXXXXXLEAQCSETDHKAQCLGMTV  1005
                *GCNC AY NQNS+QIVHIW  L LLQLL+AQ S+TD +AQ LGMTV
Subject   7431  *GCNCSAYKNQNSKQIVHIWMPLILLQLLKAQNSQTDQRAQSLGMTV  7571

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 15

Range 1: 7581 to 8117 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
398.3 bits(863) 0.0 171/179(96%) 0/179(0%) Minus/Plus
Query      223  HVDSNDGDHQGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HC*MASPPGKLPGESNEAFEARLKSLELARAQKQPTGSNQPPTLGGVLAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIARHCSVVGS  759
                HVDSN+GD +GCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HC*MASPPG+LPGESNEAFEARLKSLELARAQKQP GSNQPP LGGVLAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGES ISESDQFNVAIDIARHCS VGS
Subject   7581  HVDSNNGDSKGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HC*MASPPGRLPGESNEAFEARLKSLELARAQKQPEGSNQPPALGGVLAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESDISESDQFNVAIDIARHCSDVGS  8117

Range 2: 7461 to 7532 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.3 bits(73) 0.0 16/24(67%) 0/24(0%) Minus/Plus
Query      808  LGMTVLCL**L**F*QPPYMYYLF  879
                + + +L L**L**+*+PPYMYYLF
Subject   7461  VSLRILHL**L**Y*RPPYMYYLF  7532

Range 3: 7464 to 8123 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
390.5 bits(846) 0.0 187/220(85%) 0/220(0%) Plus/Minus
Query      217  LQAANNRTMACNIYCNVKLITL*YARLTECSNQLIYCTFIHDIWR*HNRFMLQHLSHVHSF*KSILNNPLSFSKDTTKGXXXXXXXXXXXXPCQLQRFQSGLKSFI*LTRQLSWWARHLTMSTMIINFFTNMANP*SLQTP*HFLNC*SERLTWATIFN*Y*LPSGSYETTLMITIIAVYMCKD*GCNYNAY*NQNSKQIVHIWRXXXXXXXXXAQDSHS  876
                L+A N R MACNIYCNVKLITL*Y RLTECSNQLIYCTFIHDIWR*HNRFMLQHL HVHS *KSI NNPL FSKDTTKGRRLVRT RLLLS CQLQRFQSG KSFI*LT Q SWWA HLTM TMIINFFTNMANP*SLQT *HFLNC*S+ LTWATIFN*Y*LP   YETTL ITIIAV MCKD*GCNY+AY NQNSKQIVHIWR L L QLLK Q+S +
Subject   7464  LRATNVRAMACNIYCNVKLITL*YVRLTECSNQLIYCTFIHDIWR*HNRFMLQHLPHVHSL*KSIFNNPLPFSKDTTKGRRLVRTFRLLLSSCQLQRFQSGFKSFI*LTWQPSWWACHLTMLTMIINFFTNMANP*SLQTS*HFLNC*SKCLTWATIFN*Y*LPCSPYETTLTITIIAVDMCKD*GCNYSAYKNQNSKQIVHIWRPLILSQLLKVQNSQT  8123

Range 4: 7766 to 8119 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
260.4 bits(562) 0.0 112/118(95%) 0/118(0%) Plus/Minus
Query      221  KLPTTEQWRAISIATLN*SLSDMPDSPNARINSSIAPSSMTFGDSTTDSCFNTSRMSTVFERAFSITLFLLARTPPRVGGWLEPVGCF*ALASSKDFSLASKASFDSPGNFPGGLAI*  574
                +LPT+EQWRAISIATLN*SLSDM DSPNARINSSIAPSSMTFGDSTTDSCFNTSRMSTVFERAFSITLFLLARTPPR GGWLEP GCF*ALASSKDFSLASKASFDSPGN PGGLAI*
Subject   7766  ELPTSEQWRAISIATLN*SLSDMSDSPNARINSSIAPSSMTFGDSTTDSCFNTSRMSTVFERAFSITLFLLARTPPRAGGWLEPSGCF*ALASSKDFSLASKASFDSPGNLPGGLAI*  8119

Range 5: 7580 to 7735 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
115.2 bits(245) 0.0 49/52(94%) 0/52(0%) Plus/Minus
Query      605  PIWLTPKAFKPPNTSLTVEASASLGPQFSINIDSPVALMRQP**SPSLLSTC  760
                PIWLTPKAFKPPNTSLTVEASASLGPQFSINIDSPVALMRQP  SP LLSTC
Subject   7580  PIWLTPKAFKPPNTSLTVEASASLGPQFSINIDSPVALMRQPLLSPLLLSTC  7735

Range 6: 7468 to 7545 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.8 bits(109) 0.0 22/26(85%) 0/26(0%) Plus/Minus
Query      795  EPEFQTDSTYMEAVKTITIIKGTRQS  872
                EPEFQTDSTYMEAV TITIIKG + S
Subject   7468  EPEFQTDSTYMEAVNTITIIKGAKFS  7545

Range 7: 7481 to 8113 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
362.1 bits(784) 0.0 186/211(88%) 0/211(0%) Minus/Plus
Query      227  PLIIVIVLTASIYVLSVWNSGSSXXXXXXXXXXXXRQQ*W*SSRLSHKSHWGVNIN*KLWPK*GARFNS*GSVRGFEGFRG*PYW*RNXXXXXXXLDGEPTRKVAG*VK*SF*GQTEIFGAGKGSKAAYWF*PTSYPWWCPC*KKEGY*ECSFKNCGHARGVEA*ICCAISKCHG*RCNR*VDSSIR*VWHIRE*SI*RCNRYCTPLFCCW  859
                PLIIVIVLTASIYVLSVWNSGS RRCNCNPNPCTCRQQ*W*   LSHK + GVNIN*KLWPK*G  FNS*GSVR FEGFRG*PYW*RN*LSLLTLLDG+PTRKVA *VK*SF* QTEIFGAGK SKAA  F*PTS PWWCPC*K+EGY*+CSFK+CGHA GVEA*ICCAISKCHG*RCNR*VDSSIR*V HIRE*SI*RCNRYCTPL   W
Subject   7481  PLIIVIVLTASIYVLSVWNSGSCRRCNCNPNPCTCRQQ*W***GLSHKGYRGVNIN*KLWPK*GTCFNS*GSVRRFEGFRG*PYW*RN*LSLLTLLDGKPTRKVAR*VK*SF*SQTEIFGAGKSSKAA*RF*PTSCPWWCPC*KEEGY*KCSFKDCGHAGGVEA*ICCAISKCHG*RCNR*VDSSIR*V*HIRE*SI*RCNRYCTPLL*RW  8113

Range 8: 7633 to 8118 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
304.4 bits(658) 0.0 145/162(90%) 0/162(0%) Plus/Minus
Query      222  SCQQQNNGVQYLLQR*IDHSLICQTHRMLESTXXXXXXXXXXEIAQQIHASTPLACPQFLKEHSQ*PSFF*QGHHQG*EVG*NQ*AAFEPLPAPKISVWPQKLHLTHPATFLVGSPSNNVNNDNQFLHQYG*PLKPSNPLTLP*LLKRAPHLGHNFQLILTP  707
                S Q+Q+NGVQYLLQR*IDHSLICQTHRMLESTHLLHLHP*HLEIAQQIHASTP ACPQ LKEH Q*PS F*QGHHQG EVG*N  AAFE LPAPKISVW QKLHLTH ATFLVG PSNNVNNDNQFLHQYG*PLKPSN LTLP*LLK+ PHLGHNFQLILTP
Subject   7633  SYQRQSNGVQYLLQR*IDHSLICQTHRMLESTHLLHLHP*HLEIAQQIHASTPPACPQSLKEHFQ*PSSF*QGHHQGQEVG*NLQAAFELLPAPKISVWLQKLHLTHLATFLVGLPSNNVNNDNQFLHQYG*PLKPSNLLTLP*LLKQVPHLGHNFQLILTP  8118

Range 9: 7513 to 7848 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
181.6 bits(390) 0.0 96/112(86%) 0/112(0%) Minus/Plus
Query      492  HICTICLEFWF**AL*LQP*SLHM*TAMMVIIKVVS*EPLGSQY*LKIVAQVRRSLQQLRKC*GV*RL*GLAXXXXXXXXXXXXVRWRAHQESCRVSQMKLLRPD*NLWSWQ  827
                HICTICLEFWF *AL*LQP*SLHM TA+MVI++VVS*   GSQY*LKIVAQVR  LQQLRKC* V*RL*GLAILVKKLIIIV+IVRW+AHQE C+VSQMKLL+PD*NLWSWQ
Subject   7513  HICTICLEFWFL*AL*LQP*SLHMSTAIMVIVRVVS*GLQGSQY*LKIVAQVRHLLQQLRKC*EV*RL*GLAILVKKLIIIVNIVRWQAHQEGCQVSQMKLLKPD*NLWSWQ  7848

Range 10: 7909 to 8076 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
122.5 bits(261) 0.0 51/56(91%) 0/56(0%) Minus/Plus
Query      264  KERGLLRMLFQKLWTCERC*SMNLLCYLQMSWMKVQ*MS*FEHSVSLAYQRVINLT  431
                K RGLL+MLFQ+LWTC RC*SMNLLCYLQMSWMKVQ*MS*FEHSVSL YQRVINLT
Subject   7909  KGRGLLKMLFQRLWTCGRC*SMNLLCYLQMSWMKVQ*MS*FEHSVSLTYQRVINLT  8076

Range 11: 7424 to 7570 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
104.6 bits(222) 0.0 41/49(84%) 0/49(0%) Plus/Plus
Query      858  GTRQSFPNTGLYGQSQNIVPLIIVIVLTASIYVLSVWNSGSSRRCNCNP  1004
                G RQSFP++GL+GQS+N  PLIIVIVLTASIYVLSVWNSGS RRCNCNP
Subject   7424  GPRQSFPSSGLFGQSENFAPLIIVIVLTASIYVLSVWNSGSCRRCNCNP  7570

Range 12: 7402 to 7572 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
88.6 bits(187) 0.0 38/57(67%) 0/57(0%) Minus/Minus
Query      836  LGLQLHRLLEPEFQTDSTYMEAVKTITIIRGTMF*D*P*SPVFGNDCLVPLIIVIVL  1006
                LGLQL RL EPEFQTDSTYMEAV TITII+G  F D*P SP  G DCL P  +++++
Subject   7402  LGLQLQRLQEPEFQTDSTYMEAVNTITIIKGAKFSD*PKSPELGKDCLGPQYVMLLV  7572

Range 13: 7429 to 7572 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
86.8 bits(183) 0.0 34/48(71%) 0/48(0%) Plus/Plus
Query      863  KTVIPKHWALWSVSEHCASNNCNSFNSLHICTICLEFWF**AMQLQP*  1006
                +TV PK WA WSV E C  NNC+S N LHICTICLEFWF *A+ LQP*
Subject   7429  QTVFPKLWAFWSV*EFCTFNNCDSINGLHICTICLEFWFL*AL*LQP*  7572

Range 14: 7431 to 7571 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
74.8 bits(157) 0.0 37/47(79%) 0/47(0%) Plus/Plus
Query      865  DSHSQTLGFMVSLRTLCL**L**F*QPPYMYYLSGILVLVGDAIATL  1005
                DS SQ LGF+VSLR L L**L**+*+PPYMYYL GILVLVG  IATL
Subject   7431  DSLSQALGFLVSLRILHL**L**Y*RPPYMYYLFGILVLVGAVIATL  7571

Range 15: 7431 to 7571 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.4 bits(132) 0.0 33/47(70%) 0/47(0%) Minus/Minus
Query      865  *GCNCIAY*NQNSRQIVHIWRXXXXXXXLEAQCSETDHKAQCLGMTV  1005
                *GCN  AY NQNS+QIVHIWR L L QLL+ Q S+TD KAQ LG TV
Subject   7431  *GCNYSAYKNQNSKQIVHIWRPLILSQLLKVQNSQTDQKAQSLGKTV  7571

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: Hiz6

Sequence ID: AB277786.1 Length: 2876 Number of Matches: 14

Range 1: 1837 to 2373 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
361.7 bits(783) 0.0 158/179(88%) 0/179(0%) Minus/Plus
Query      223  HVDSNDGDHQGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HC*MASPPGKLPGESNEAFEARLKSLELARAQKQPTGSNQPPTLGGVLAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIARHCSVVGS  759
                HVDS+ G HQGC IRATGESILIENCGPSEALASTV+EVLGGLKALGVSH  EEIDYHC*  *MAS  GKLPGESNEAFEARLK+LELARAQKQP GSN PPTLGG+LAKRKRVIENALSKTVDMREVLKHE+VV+SPNVMDEGAIDELIRAFGESGI+ES QF+VAIDIARHCS VGS
Subject   1837  HVDSSSGTHQGCFIRATGESILIENCGPSEALASTVREVLGGLKALGVSHTIEEIDYHC*TG*MASQIGKLPGESNEAFEARLKALELARAQKQPEGSNTPPTLGGLLAKRKRVIENALSKTVDMREVLKHETVVISPNVMDEGAIDELIRAFGESGIAESAQFDVAIDIARHCSDVGS  2373

Range 2: 1734 to 1799 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.8 bits(74) 0.0 15/22(68%) 0/22(0%) Minus/Plus
Query      797  VPLIIVIVLTASIYVLSVWNSG  862
                +PL++VI L A I+VLSVWNSG
Subject   1734  LPLMLVIGLIAFIHVLSVWNSG  1799

Range 3: 2025 to 2375 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
181.1 bits(389) 0.0 84/117(72%) 0/117(0%) Plus/Minus
Query      221  KLPTTEQWRAISIATLN*SLSDMPDSPNARINSSIAPSSMTFGDSTTDSCFNTSRMSTVFERAFSITLFLLARTPPRVGGWLEPVGCF*ALASSKDFSLASKASFDSPGNFPGGLAI  571
                +LPT+EQ RAIS+AT N +LS MPDSPNARI+SSIAPSS+TFG+ TT SCF+TS +STVFE AFSITL   A  PPRVGG LEP GCF*ALA+S  FS AS AS DSPG+FP  LAI
Subject   2025  ELPTSEQ*RAISMATSNCALSAMPDSPNARISSSIAPSSITFGEITTVSCFSTSLISTVFESAFSITLLRFASKPPRVGGVLEPSGCF*ALANSSAFSRASNASLDSPGSFPI*LAI  2375

Range 4: 1839 to 1988 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
97.3 bits(206) 0.0 41/50(82%) 0/50(0%) Plus/Minus
Query      608  IWLTPKAFKPPNTSLTVEASASLGPQFSINIDSPVALMRQP**SPSLLST  757
                +WLTPKAFKPPNTSLTV+A ASLGPQFSI IDSPVAL++QP * P LLST
Subject   1839  VWLTPKAFKPPNTSLTVDARASLGPQFSIRIDSPVALIKQPW*VPLLLST  1988

Range 5: 1724 to 1798 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
34.1 bits(68) 0.0 13/25(52%) 0/25(0%) Plus/Minus
Query      798  PEFQTDSTYMEAVKTITIIKGTRQS  872
                PEFQTD+T + A++ +T IKG + S
Subject   1724  PEFQTDNTCINAIRPMTSIKGKKFS  1798

Range 6: 1771 to 2379 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
209.6 bits(451) 0.0 105/203(52%) 0/203(0%) Plus/Minus
Query      217  LQAANNRTMACNIYCNVKLITL*YARLTECSNQLIYCTFIHDIWR*HNRFMLQHLSHVHSF*KSILNNPLSFSKDTTKGXXXXXXXXXXXXPCQLQRFQSGLKSFI*LTRQLSWWARHLTMSTMIINFFTNMANP*SLQTP*HFLNC*SERLTWATIFN*Y*LPSGSYETTLMITIIAVYMCKD*GCNYNAY*NQNSKQIVHI  825
                L A N R + CNIY ++KL  L YARL++C+NQLIYCT IH+IW  H+ FM  HLSH+HS  + I NN L+F K  T+    V    LLLS  QLQRF  G K FI L R+ S   RH    TMIINFF +MANP*SLQT  H      +  TWA IFN  *  SG  + TL+    AVYM KD   NYN+  +QNSKQ +H+
Subject   1771  LGATNIRAVTCNIYGHIKLCALSYARLSKCANQLIYCTLIHNIWGNHHCFMF*HLSHIHSLRECIFNNSLTFCKQATESGWCVGAFWLLLSSSQLQRF*PGFKCFIRLAREFSNLTRHSACLTMIINFFDSMANP*SLQTSQHLSYSGCKGFTWAAIFNQD*FASGPDKATLVSATTAVYMSKDLDGNYNS*QDQNSKQTIHV  2379

Range 7: 1845 to 2369 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
140.4 bits(300) 0.0 82/175(47%) 0/175(0%) Minus/Plus
Query      227  QQ*W*SSRLSHKSHWGVNIN*KLWPK*GARFNS*GSVRGFEGFRG*PYW*RNXXXXXXXLDGEPTRKVAG*VK*SF*GQTEIFGAGKGSKAAYWF*PTSYPWWCPC*KKEGY*ECSFKNCGHARGVEA*ICCAISKCHG*RCNR*VDSSIR*VWHIRE*SI*RCNRYCTPLFCCW  751
                QQ*W S RL ++ HW +N +*KL PK*    +    V  FEGFRG*PY+ RN*LSLL  L+GE   K    V *S *   +  G G  S+AA     T++  W  C   E Y*+C+ ++CG+ RG + *      KC+G* CNR* DS I  VWH  E +I*  +RYCT L  CW
Subject   1845  QQ*WHSPRLLYQGHWRINPD*KLRPK*SPCIHCKRGVGRFEGFRG*PYYRRN*LSLLNRLNGESNWKTPWRV**SI*SPAKSAGVG*SSEAARRLQHTTHSRWLACKT*ESY*KCTLEDCGYERGAKT*NSGDFPKCYG*GCNR*ADSRIWRVWHS*ERTI*CGHRYCTSLL*CW  2369

Range 8: 1769 to 2101 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
85.8 bits(181) 0.0 58/111(52%) 0/111(0%) Minus/Plus
Query      495  HICTICLEFWF**AL*LQP*SLHM*TAMMVIIKVVS*EPLGSQY*LKIVAQVRRSLQQLRKC*GV*RL*GLAXXXXXXXXXXXXVRWRAHQESCRVSQMKLLRPD*NLWSW  827
                + C +CLEFW  * L*L   SL M*TA++ + KV    PL +Q *LKI AQV+       +C  V*RL*GLAIL KKLIIIV    WR   E+   S MK L+P *  WSW
Subject   1769  YTCIVCLEFWSC*EL*LPSKSLLM*TAVVALTKVALSGPLANQS*LKIAAQVKPLHPL*ERCWEV*RL*GLAILSKKLIIIVKQAEWRVKLENSLASLMKHLKPG*KRWSW  2101

Range 9: 2171 to 2329 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.5 bits(117) 0.0 29/53(55%) 0/53(0%) Minus/Plus
Query      267  RGLLRMLFQKLWTCERC*SMNLLCYLQMSWMKVQ*MS*FEHSVSLAYQRVINL  425
                R LL+M  ++LW  ERC*+M    + QM WM+VQ*MS*F H  SLA  R  NL
Subject   2171  RELLKMHSRRLWI*ERC*NMKQW*FPQMLWMRVQ*MS*FAHLESLA*LRAHNL  2329

Range 10: 1680 to 1826 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
81.7 bits(172) 0.0 30/49(61%) 0/49(0%) Plus/Plus
Query      858  GTRQSFPNTGLYGQSQNIVPLIIVIVLTASIYVLSVWNSGSSRRCNCNP  1004
                G +QSFP++G++GQS+N +PL++VI L A I+VLSVWNSG  R CNC+P
Subject   1680  GPKQSFPSSGIFGQSENFLPLMLVIGLIAFIHVLSVWNSGLVRNCNCHP  1826

Range 11: 1961 to 2119 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.0 bits(118) 0.0 28/53(53%) 0/53(0%) Plus/Minus
Query      477  AAFEPLPAPKISVWPQKLHLTHPATFLVGSPSNNVNNDNQFLHQYG*PLKPSN  635
                AA E  P P +    Q LH T    F   SP +  NNDNQFL  YG*PLKPSN
Subject   1961  AASEL*PTPALLAGLQMLH*TRQGVFQFDSPFSLFNNDNQFLR*YG*PLKPSN  2119

Range 12: 2282 to 2374 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.4 bits(60) 0.0 15/31(48%) 0/31(0%) Plus/Minus
Query      222  SCQQQNNGVQYLLQR*IDHSLICQTHRMLES  314
                S Q Q++ VQYL    I  S +CQT +M ES
Subject   2282  SYQHQSSDVQYLWPHQIVRSQLCQTLQMRES  2374

Range 13: 1883 to 1924 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.0 bits(46) 0.0 9/14(64%) 0/14(0%) Plus/Minus
Query      672  HLGHNFQLILTPQW  713
                HLG NFQ  L  QW
Subject   1883  HLGRNFQSGLIRQW  1924

Range 14: 1664 to 1825 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.3 bits(121) 0.0 25/54(46%) 0/54(0%) Minus/Minus
Query      842  GLQLHRLLEPEFQTDSTYMEAVKTITIIRGTMF*D*P*SPVFGNDCLVPLIIVI  1003
                G QL  L  PEFQTD+T + A++ +T I+G  F D P  P  GNDCL P  +++
Subject   1664  GWQLQFLTRPEFQTDNTCINAIRPMTSIKGKKFSDWPNIPELGNDCLGPQ*VIL  1825

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: Hiz3

Sequence ID: AB277785.1 Length: 2876 Number of Matches: 15

Range 1: 1837 to 2373 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
358.9 bits(777) 0.0 157/179(88%) 0/179(0%) Minus/Plus
Query      223  HVDSNDGDHQGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HC*MASPPGKLPGESNEAFEARLKSLELARAQKQPTGSNQPPTLGGVLAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIARHCSVVGS  759
                HVDS+ G+HQGC IRATGESILIENCGPSEALASTVKEVLGGLKALGVS   EEIDYHC*  *MAS  GKLPGESNEAFEARLKSLELARAQKQP GSN PPTL G+LAKRKR+IENALSKTVDMREVLKHE+VV+SPNVMDEGAIDELIRAFGESGI+ES QF+VAIDIARHCS VGS
Subject   1837  HVDSSSGNHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVSRAVEEIDYHC*IG*MASQIGKLPGESNEAFEARLKSLELARAQKQPEGSNAPPTLSGILAKRKRIIENALSKTVDMREVLKHETVVISPNVMDEGAIDELIRAFGESGIAESVQFDVAIDIARHCSDVGS  2373

Range 2: 1723 to 1788 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
22.6 bits(43) 0.0 12/22(55%) 0/22(0%) Minus/Plus
Query      808  MTVLCL**L**F*QPPYMYYLF  873
                + +LCL* L * *   YMY LF
Subject   1723  LRILCL*CLS*V*SHSYMYCLF  1788

Range 3: 2025 to 2375 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
191.7 bits(412) 0.0 90/117(77%) 0/117(0%) Plus/Minus
Query      221  KLPTTEQWRAISIATLN*SLSDMPDSPNARINSSIAPSSMTFGDSTTDSCFNTSRMSTVFERAFSITLFLLARTPPRVGGWLEPVGCF*ALASSKDFSLASKASFDSPGNFPGGLAI  571
                +LPT+EQ RAISIAT N +LS MPDSPNARI+SSIAPSSMTFG+ TT SCF TS MSTVFE AFSI L  LAR P RVGG LEP GCF*ALA+S DFS ASKASFDSPG+FP  LAI
Subject   2025  ELPTSEQ*RAISIATSNCTLSAMPDSPNARISSSIAPSSMTFGEITTVSCFKTSLMSTVFESAFSIILLRLARMPLRVGGALEPSGCF*ALANSSDFSRASKASFDSPGSFPI*LAI  2375

Range 4: 1839 to 1982 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
88.6 bits(187) 0.0 39/48(81%) 0/48(0%) Plus/Minus
Query      614  LTPKAFKPPNTSLTVEASASLGPQFSINIDSPVALMRQP**SPSLLST  757
                LTPKAFKPP+TS TV+A ASLGPQFSI IDSPVALM+QP * P LLST
Subject   1839  LTPKAFKPPSTSFTVDARASLGPQFSIKIDSPVALMKQPW*LPLLLST  1982

Range 5: 1724 to 1798 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.6 bits(78) 0.0 15/25(60%) 0/25(0%) Plus/Minus
Query      798  PEFQTDSTYMEAVKTITIIKGTRQS  872
                PEFQTD+T M A++ +T IKGT+ S
Subject   1724  PEFQTDNTCMNAIRPMTSIKGTKFS  1798

Range 6: 1771 to 2097 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
114.7 bits(244) 0.0 57/109(52%) 0/109(0%) Plus/Minus
Query      499  LQRFQSGLKSFI*LTRQLSWWARHLTMSTMIINFFTNMANP*SLQTP*HFLNC*SERLTWATIFN*Y*LPSGSYETTLMITIIAVYMCKD*GCNYNAY*NQNSKQIVHI  825
                LQRF  G KS I* T +      H    TMIINFF + ANP*SLQT  H L+   + LTWA + N  *L SG  E TL+I   AVYM KD   NYN+Y +QNSKQ +H+
Subject   1771  LQRF*PGFKSLI*FTGEFPNLTCHSANLTMIINFFNSTANP*SLQTSQHLLHSGCKGLTWAAVLNQN*LSSGPNEATLVIATTAVYMSKDLDGNYNSYQDQNSKQTIHV  2097

Range 7: 2146 to 2379 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.0 bits(238) 0.0 44/78(56%) 0/78(0%) Plus/Minus
Query      217  LQAANNRTMACNIYCNVKLITL*YARLTECSNQLIYCTFIHDIWR*HNRFMLQHLSHVHSF*KSILNNPLSFSKDTTK  450
                L A N R + C IY ++KL    YAR T+C+NQL+YCTFIHDIW  H+RF+ Q+L HVH  *K IL NPL+F K+ T+
Subject   2146  LGATNIRAVTCYIYSHIKLHAFSYARFTKCTNQLVYCTFIHDIWGNHHRFVFQNLPHVHRL*KCILYNPLAFGKNATE  2379

Range 8: 1734 to 2225 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
135.3 bits(289) 0.0 90/164(55%) 0/164(0%) Minus/Plus
Query      371  VPLIIVIVLTASIYVLSVWNSGSSXXXXXXXXXXXXRQQ*W*SSRLSHKSHWGVNIN*KLWPK*GARFNS*GSVRGFEGFRG*PYW*RNXXXXXXXLDGEPTRKVAG*VK*SF*GQTEIFGAGKGSKAAYWF*PTSYPWWCPC*KKEGY*ECSFKNCGHARGVE  862
                VPL++VI L A I+VLSVWNSG  R CNC+PNPC+CRQQ*W S RL H  HW VN +*+L PK*G   +  G    FEGFRG*P  *RN*LSLL  L+G+   +   *+K* F*   +I G    SKAA  F* T+Y  W  C  +E Y EC+FK+ GH  G E
Subject   1734  VPLMLVIGLIAFIHVLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLH*GHWRVNFD*ELRPK*GPCIHCEGGAGRFEGFRG*PCC*RN*LSLLNWLNGKSNWETPR*IK*GF*SPAKIAGVS*SSKAAGRF*CTTYSQWHSCQTQEDYRECTFKDGGHEGGFE  2225

Range 9: 2250 to 2369 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.9 bits(107) 0.0 23/40(57%) 0/40(0%) Minus/Plus
Query      227  KCHG*RCNR*VDSSIR*VWHIRE*SI*RCNRYCTPLFCCW  346
                KCHG*RCNR  DS I *+WH  + +I*   RY T L  CW
Subject   2250  KCHG*RCNRRADSCIW*IWHS*KRAI*CGYRYSTSLL*CW  2369

Range 10: 1769 to 2098 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
93.2 bits(197) 0.0 60/110(55%) 0/110(0%) Minus/Plus
Query      498  HICTICLEFWF**AL*LQP*SLHM*TAMMVIIKVVS*EPLGSQY*LKIVAQVRRSLQQLRKC*GV*RL*GLAXXXXXXXXXXXXVRWRAHQESCRVSQMKLLRPD*NLWS  827
                H C +CLEFW  * L*L   SL M*TA++ I KV S  PL SQ+*L+  AQVR      R+C  V*RL*GLA+L+KKLIIIV +  W+    +  V+QM+LL+P *N WS
Subject   1769  HTCIVCLEFWSW*EL*LPSKSLLM*TAVVAITKVASLGPLESQF*LRTAAQVRPLHPL*RRCWEV*RL*GLAVLLKKLIIIVKLAEWQVKLGNSPVNQMRLLKPG*NRWS  2098

Range 11: 2171 to 2329 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.2 bits(112) 0.0 29/53(55%) 0/53(0%) Minus/Plus
Query      267  RGLLRMLFQKLWTCERC*SMNLLCYLQMSWMKVQ*MS*FEHSVSLAYQRVINL  425
                RGL RM FQ+ WT  R *+     + QMSWMKVQ* S*F H V+LA  +  NL
Subject   2171  RGL*RMHFQRRWT*GRF*NTKRW*FPQMSWMKVQ*TS*FVHLVNLA*LKACNL  2329

Range 12: 1883 to 2224 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.8 bits(194) 0.0 54/114(47%) 0/114(0%) Plus/Minus
Query      372  STPLACPQFLKEHSQ*PSFF*QGHHQG*EVG*NQ*AAFEPLPAPKISVWPQKLHLTHPATFLVGSPSNNVNNDNQFLHQYG*PLKPSNPLTLP*LLKRAPHLGHNFQLILTPQW  713
                S P +CP  LK HS * S   Q  H  * V *N  AAFE    P I    QK HL H        P +  NNDNQFL Q+G*PLKPSN    P    + PHLG + Q  LT QW
Subject   1883  SKPPSCPPSLKVHSL*SSCVWQECH*E*VVH*NLPAAFEL*LTPAILAGLQKPHLIHRGVSQFDLPFSQFNNDNQFLQQHG*PLKPSNLPAPPSQWMQGPHLGRSSQSKLTLQW  2224

Range 13: 2282 to 2422 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
27.6 bits(54) 0.0 15/47(32%) 0/47(0%) Plus/Minus
Query      174  CKNSQLESNSHASNPPSCQQQNNGVQYLLQR*IDHSLICQTHRMLES  314
                C   +++S        S Q Q++ V YL    I    +CQ H+M ES
Subject   2282  CLGHKMDSCLSGLTSGSYQHQSSDVLYL*PHQIARFQLCQIHQMHES  2422

Range 14: 1680 to 1826 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.0 bits(177) 0.0 31/49(63%) 0/49(0%) Plus/Plus
Query      858  GTRQSFPNTGLYGQSQNIVPLIIVIVLTASIYVLSVWNSGSSRRCNCNP  1004
                G +QSFP++G++GQS+N VPL++VI L A I+VLSVWNSG  R CNC+P
Subject   1680  GPKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSGLGRNCNCHP  1826

Range 15: 1664 to 1825 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.4 bits(119) 0.0 25/54(46%) 0/54(0%) Minus/Minus
Query      842  GLQLHRLLEPEFQTDSTYMEAVKTITIIRGTMF*D*P*SPVFGNDCLVPLIIVI  1003
                G QL  L  PEFQTD+T M A++ +T I+GT F D P  P  G DC  P  +++
Subject   1664  GWQLQFLPRPEFQTDNTCMNAIRPMTSIKGTKFSDWPNIPELGKDCFGPQ*VIL  1825

Nucleotide Sequence (1752 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 33 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
176
352
528
704
880
1056
1232
1408
1584
1752

Descriptions

Alignments

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 16

Range 1: 6040 to 7713 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1286.8 bits(2802) 0.0 536/558(96%) 0/558(0%) Minus/Plus
Query       74  LGSFAIMRFTGEASTFLFNTMANMLFTFLRYELTGSESIAFAGDDMCANSRLRLKTEHEGFLNMICLKAKVQFVTNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFTAFTAGVPDTPNLSGRYIKPYSPGCAVKGRINILDEYLSVDDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNVRSDGLDEVITGSPFELDVEGVLICFGKEAVDLAVAHDSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCKLGQNCHSVDDRLGHWLGAAFPKKVKFAILRGQHTSISTWRTL*GRHQKHNILWSQTVFPELWAFWSV*EFCTFNNCDSINGLHICTICLEFWFL*AL*LQP*SLHMSTAIMVIVRVVS*GLQGSQY*LKIVAQVRHLLQQLRKC*EV*R  1747
                LGSFAIMRFTGEASTFLFNTMANMLFTFLRYELTGSESIAFAGDDMCANSRLRLKTEHEGFLNMICLKAKVQFVTNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWH  IIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESF AFTAGVPDTPNLSGRYIKPYSPGCAVKG+INILDEYLSV+D S FDVLFSDPYQNISVPREAHFIKSKTCRFG+NTCKYLLSFGF+V SD  DEVITGSPFELDVEGVLICFGKEAV+LA AH+SDFKLPCEVRG TFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*+AFSATC+LGQNC+S+DDRLGHWLGAAFPKKVKFA+LRGQHTSISTWRTL*GRHQKHNILWSQTVFP+LWAFWSV*EFCTFNNCDSINGLHICTICLEFWFL*AL*LQP*SLHMSTAIMVIVRVVS*GLQGSQY*LKIVAQVRHLLQQLRKC*EV*R
Subject   6040  LGSFAIMRFTGEASTFLFNTMANMLFTFLRYELTGSESIAFAGDDMCANSRLRLKTEHEGFLNMICLKAKVQFVTNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHY*IIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVNDFSDFDVLFSDPYQNISVPREAHFIKSKTCRFGKNTCKYLLSFGFDVHSDRSDEVITGSPFELDVEGVLICFGKEAVNLAAAHNSDFKLPCEVRGTTFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*DAFSATCELGQNCYSIDDRLGHWLGAAFPKKVKFAVLRGQHTSISTWRTL*GRHQKHNILWSQTVFPKLWAFWSV*EFCTFNNCDSINGLHICTICLEFWFL*AL*LQP*SLHMSTAIMVIVRVVS*GLQGSQY*LKIVAQVRHLLQQLRKC*EV*R  7713

Range 2: 6040 to 7779 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1197.5 bits(2607) 0.0 529/580(91%) 0/580(0%) Plus/Minus
Query        8  GSPSNNVNNDNQFLHQYG*PLKPSNLLTLP*LLKQVPHLGHNFQLILTPL*PL*DNPYYHHYCCRHVXXXXXXXXXXXEPEFQTDSTYMEAVNTITIIKGAKFSD*PKSPELGKDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDYQLLSMSCCSNVEPVLIIRGRIS*FQ*GDNIKCGTSYLTRKFEVGIVRNRQINCLLAKTN*DALHI*LKR*TSNHFIKPITTHIKTKG*KVLACILTKSAGLGLYEVSLPRNTDILIWVRE*HVKTGNVINRQILIKYVYPPFYSTTRRVWLDVPPRKIGSVGNSGCEGCETLVLSDELSYQTTFTATRNTMNDNWKSEHTIDTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQSRN*ASHLVLISNQEPHTVVVRXXXXXXXXXXXQLTQPVGIGHLNCIIINAIFQVTHFTSNANSLPNQLRFLKDPFFEQTPSTKCRVCDELYFSLKANHIQETFMLSFKP*SAVCAHIIARKRN*LGPCQFVP*EGKQHICHCVEQKGTGFTRKSHYGKRPK  1747
                G PSNNVNNDNQFLHQYG*PLKPSNLLTLP*LLKQVPHLGHNFQLILTPL*PL*DNPYYHHYCCRHVQGLGLQLQRLQEPEFQTDSTYMEAVNTITIIKGAKFSD*PKSPELGKDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHD QLL MSCCSNVEPVLIIRGRIS*FQ*G+NIKC TSYLTRKFE+ I+R+ Q+NCLLAK N*  L+I LK *T NHFI+P+T HIKTKG*KVL CI  K AGL LYEVSLP NTDILIWVRE*HVK   VI+RQILI+YVY PFYSTTRRVWLDVPPRK+ SVGN+G E  ETLV S+ELSYQTTFT TRN MN+NWKSEH I+THKLKRRQSFN*VIHNN  MPNT*GLIYSFKQSRN*ASHLVLISNQEPHTVVVRFNF FIHHFN*QL QPVGIGHLNCIIINAIFQV HFTSNANSLPNQLRFLKDPFFEQTPSTKCRVCDELYFSLKANHIQETFMLSFKP*SAVCAHIIARKRN*LGPCQFVP*EGKQHICHCVEQKGTGFTRKSHYGKRPK
Subject   6040  GLPSNNVNNDNQFLHQYG*PLKPSNLLTLP*LLKQVPHLGHNFQLILTPL*PL*DNPYYHHYCCRHVQGLGLQLQRLQEPEFQTDSTYMEAVNTITIIKGAKFSD*PKSPELGKDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDDQLLPMSCCSNVEPVLIIRGRIS*FQ*GNNIKCSTSYLTRKFEI*IMRSCQVNCLLAKAN*HTLNIQLKW*TCNHFIRPVTMHIKTKG*KVLTCIFAKPAGL*LYEVSLPWNTDILIWVRE*HVKIRKVIHRQILIEYVYLPFYSTTRRVWLDVPPRKVWSVGNAGRESYETLVFSNELSYQTTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNLIMPNT*GLIYSFKQSRN*ASHLVLISNQEPHTVVVRFNFLFIHHFN*QLAQPVGIGHLNCIIINAIFQVAHFTSNANSLPNQLRFLKDPFFEQTPSTKCRVCDELYFSLKANHIQETFMLSFKP*SAVCAHIIARKRN*LGPCQFVP*EGKQHICHCVEQKGTGFTRKSHYGKRPK  7779

Range 3: 6684 to 7778 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
792.9 bits(1724) 0.0 339/365(93%) 0/365(0%) Plus/Minus
Query        9  ARHLTMLTMTINFFTNMANP*SLQTS*HFLNC*SKCLTWATIFN*Y*LPCSPYETTLTITIIAVDMCKD*GCNYSAYKNQNSKQIVHIWRPLILSQLLKVQNSQTDQKAQSSGKTVWDHNMLCFWCRPYNVLHVEIDVCCPLSMANLTFLGNAAPSQCPSLSSTE*QFWPNLQVAEKAFHCMIINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSESCATAKSTASLPKQIRTPSTSNSNGEPVITSSSPSLRTLKPKDRRYLHVFSPNLQVLDFMK*ASLGTLIF*YGSENSTSKPEMSSTDRYSSSMFILPFTAQPGEYGLMYLPERLGVSGTPAVKAVKLSSSVMSSLIK  1103
                A HLTMLTM INFFTNMANP*SLQTS*HFLNC*SKCLTWATIFN*Y*LPCSPYETTLTITIIAVDMCKD*GCNYSAYKNQNSKQIVHIWRPLILSQLLKVQNSQTDQKAQS GKTVWDHNMLCFWCRPYNVLHVEIDVCCPLS ANLTFLGNAAPSQCPSLSS E*QFWPN QVAEKA HCM+INFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNV PRTSQGSLKSE CA AK TASLPKQI TPSTSNSNGEPVITSS  SL T KPKDRRYLHVF PNLQV DFMK*ASLGTLIF*YGSEN+TSK E S TDRYSSSMFI PFTAQPGEYGLMYLPER GVSGTPAVKA+KLSSSVMSSLIK
Subject   6684  ACHLTMLTMIINFFTNMANP*SLQTS*HFLNC*SKCLTWATIFN*Y*LPCSPYETTLTITIIAVDMCKD*GCNYSAYKNQNSKQIVHIWRPLILSQLLKVQNSQTDQKAQSLGKTVWDHNMLCFWCRPYNVLHVEIDVCCPLSTANLTFLGNAAPSQCPSLSSME*QFWPNSQVAEKASHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVVPRTSQGSLKSELCAAAKLTASLPKQISTPSTSNSNGEPVITSSDLSLCTSKPKDRRYLHVFLPNLQVFDFMK*ASLGTLIF*YGSENNTSKSEKSFTDRYSSSMFIFPFTAQPGEYGLMYLPERFGVSGTPAVKAMKLSSSVMSSLIK  7778

Range 4: 6692 to 7786 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
681.0 bits(1480) 0.0 325/365(89%) 0/365(0%) Minus/Plus
Query        1  ESSSLRTRVSQPSQPEFPTLPIFLGGTSSHTLLVVL*KGG*TYLMSICLLMTFPVLTCYSLTHIKISVFRGRLTS*SPRPADLVRIHASTFYPLVLMCVVMGLMK*LLVHRLS*MWRAS*FVLARRQLIWRLRTIPTSNFLVRYEVPHLMLSPY*NQEIRPLMISTGSTLLQQDIERS**SCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPRQSFPSSGLFGQSENFAPLIIVIVLTASIYVLSVWNSGSXXXXXXXXXXXXXRQQ*W***GLSHKGYRGVNIN*KLWPK*GTCFNS*GSVRRFEGFRG*PYW*RNXXXXXXXLDGEPLK  1095
                ESS L+TRVS  S+P FPTL  FLGGTSSHTLLVVL*KG *TY MSICL MTF +LTCYSLTHIKISVF+GRLTS*S RPA L +IH STFYPLVLMC+V GLMK*L VH LS M R  *F LARRQL W+LR I  SNFLVRYEV HLML PY*NQEIRPLMISTGSTLLQQDI RS* SCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPRQSFPSSGLFGQSENFAPLIIVIVLTASIYVLSVWNSGSCRRCNCNPNPCTCRQQ*W***GLSHKGYRGVNIN*KLWPK*GTCFNS*GSVRRFEGFRG*PYW*RN*LSLLTLLDG+P +
Subject   6692  ESSLLKTRVS*LSRPAFPTLQTFLGGTSSHTLLVVL*KGR*TYSMSICL*MTFLILTCYSLTHIKISVFQGRLTS*SQRPAGLAKIHVSTFYPLVLMCIVTGLMK*LQVHHLSWMLRVC*FALARRQLTWQLRIIQISNFLVRYEVLHLMLLPY*NQEIRPLMISTGSTLLQQDIGRS*SSCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPRQSFPSSGLFGQSENFAPLIIVIVLTASIYVLSVWNSGSCRRCNCNPNPCTCRQQ*W***GLSHKGYRGVNIN*KLWPK*GTCFNS*GSVRRFEGFRG*PYW*RN*LSLLTLLDGKPTR  7786

Range 5: 6039 to 6605 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
413.9 bits(897) 0.0 187/189(99%) 0/189(0%) Plus/Minus
Query     1182  VDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSMQFSRLPISRAMQILSQIN*GFLKIPSLNKHHPQNVGFVTNCTLALRQIIFRKPSCSVLSLNLLFAHISSPANAIDSDPVSSYLKKVNNIFAIVLNKKVLASPVNLIMAKDPS  1748
                VDKALTKLFIII  CQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSMQFSRLPISRAMQILSQIN*GFLKIPSLNKHHPQNVGFVTNCTLALRQIIFRKPSCSVLSLNLLFAHISSPANAIDSDPVSSYLKKVNNIFAIVLNKKVLASPVNLIMAKDPS
Subject   6039  VDKALTKLFIII**CQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSMQFSRLPISRAMQILSQIN*GFLKIPSLNKHHPQNVGFVTNCTLALRQIIFRKPSCSVLSLNLLFAHISSPANAIDSDPVSSYLKKVNNIFAIVLNKKVLASPVNLIMAKDPS  6605

Range 6: 6068 to 6430 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
282.9 bits(611) 0.0 118/121(98%) 0/121(0%) Minus/Plus
Query     1357  RVKPVPFCSTQWQICCLPS*GTN*QGPSQLRLRAMICAQTAD*GLKLSMKVS*I*FALRLKYNSSQTLHFVDGVCSKKGSLRNLN*FGREFALLVKWVTWKIALIIMQLRCPMPTGWVSCQ  1719
                RVKPVPFCSTQWQICCLPS*GTN*QGPSQLRLRAMICAQTAD*GLKLSMKVS*I*FALRLKYNSSQTLHFVDGVCSKKGSLRNL+*FGREFALLVKW TWKIALIIMQLRCPMPTGW SCQ
Subject   6068  RVKPVPFCSTQWQICCLPS*GTN*QGPSQLRLRAMICAQTAD*GLKLSMKVS*I*FALRLKYNSSQTLHFVDGVCSKKGSLRNLS*FGREFALLVKWATWKIALIIMQLRCPMPTGWASCQ  6430

Range 7: 6438 to 6641 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
136.7 bits(292) 0.0 64/68(94%) 0/68(0%) Minus/Plus
Query     1146  DE*RRS*SALQLCAVPG*K*AQDEMLNFWIV*SYRLGLKCLAWCDYYE*LS*SFVYV*VCGCL*CAQI  1349
                DE*R S*SALQLCAVPG*K*AQDEMLNFWIV*SYRLGLKCLA  DYYE*LS*SFVYV*VCGCL* AQI
Subject   6438  DE*RGS*SALQLCAVPG*K*AQDEMLNFWIV*SYRLGLKCLALLDYYE*LS*SFVYV*VCGCL*RAQI  6641

Range 8: 6161 to 7480 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
850.6 bits(1850) 0.0 386/440(88%) 0/440(0%) Plus/Minus
Query      307  CKILRLTKKPRARERLSGTTICYAFGAVPITSSMWKLMYVVP*VWQI*LS*EMQHQANAQAYRQRSDSFGPICRLLKRHFTA*LSTSFYVLLQQCRTSAYHQRSDLLISIR*QHQMWHLVPHKEV*SRNRAQPPNQLPPCQNKLGRPPHLTQTVNQ*SLHQAHHYAH*NQRIEGTCMYSHQICRSWTL*SEPPSEH*YFDMGQRIARQNRKCHQQTDTHQVCLSSLLQHNQESMA*CTSQKDWECXXXXXXXXXNSRPQ**ALLSNYFYRYQEHYERQLEI*AHYRHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQLLLHSSFQLTTHPTCRHRTPQLHNYQCNFPGYPFHEQCKFSPKSIEVS*RSLL*TNTIHKM*GL*RIVL*P*GKSYSGNLHAQF*ALICCLRTYHRPQ  1626
                CKILRLTKKPRA ERLSGTTICYAFGAVPITSSMWKLMYVVP*V QI*LS*EMQHQANAQAYRQ S+SFGPI RLLKRH TA* STS YVLLQQCRTSAYHQRSDLLISIR*QHQM +LVPHKEV*+ N AQ P+ LPPCQ+KL  P H TQ VN *SLHQ  HYAH NQRIEGT MY  Q CRS TL*SEPP EH*YFDMGQRI RQN+K H QTDTH+VCLSSLLQHNQESMA*CTSQK  ECRE R *+L*NSR Q**ALLSNYFY YQE YE+QLEI*A Y+HPQTQT*TKL*LSYS**S++AKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQL LHSSFQLTT PTCRHRTPQLHNYQCNFPG PFHEQCKFSPKS EVS*RSLL*TNTIHKM*GL*RIVL*P*GKSYSGNLHAQF*ALICCLRTYHRPQ
Subject   6161  CKILRLTKKPRAWERLSGTTICYAFGAVPITSSMWKLMYVVP*VRQI*LS*EMQHQANAQAYRQWSNSFGPIRRLLKRHLTA**STSSYVLLQQCRTSAYHQRSDLLISIR*QHQM*YLVPHKEV*NLNYAQLPS*LPPCQSKLAHPQHPTQMVNL*SLHQTCHYAHQNQRIEGTYMYFCQTCRSLTL*SEPPLEH*YFDMGQRITRQNQKSHSQTDTHRVCLSSLLQHNQESMA*CTSQKGLECRERRP*KL*NSRLQ**ALLSNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SNNAKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQLPLHSSFQLTTRPTCRHRTPQLHNYQCNFPGCPFHEQCKFSPKSTEVS*RSLL*TNTIHKM*GL*RIVL*P*GKSYSGNLHAQF*ALICCLRTYHRPQ  7480

Range 9: 7532 to 7735 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
137.2 bits(293) 0.0 68/68(100%) 0/68(0%) Plus/Minus
Query       52  PIWLTPKAFKPPNTSLTVEASASLGPQFSINIDSPVALMRQXXXXXXXXXTCARIRVAITAPTRTRIP  255
                PIWLTPKAFKPPNTSLTVEASASLGPQFSINIDSPVALMRQPLLSPLLLSTCARIRVAITAPTRTRIP
Subject   7532  PIWLTPKAFKPPNTSLTVEASASLGPQFSINIDSPVALMRQPLLSPLLLSTCARIRVAITAPTRTRIP  7735

Range 10: 6038 to 6088 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.4 bits(95) 0.0 17/17(100%) 0/17(0%) Plus/Minus
Query     1699  KRYWLHP*ISLWQKTQA  1749
                KRYWLHP*ISLWQKTQA
Subject   6038  KRYWLHP*ISLWQKTQA  6088

Range 11: 6675 to 7280 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
344.7 bits(746) 0.0 164/202(81%) 0/202(0%) Minus/Plus
Query      507  *K*FDKRAHH*GREFXXXXXXXXXXXXSFWEVHQAILSWLCCKREDKHT**VSVC**HFRF*RAIL*PISKYQCSEGGSLHKVQDLQIW*EYMQVPSILWF*CA**WA**SDYWFTV*VRCGGRPNLFWQGGS*FGGCARFRLQTSL*GTRCHI*CCHLIEIKRSDL***ALVLHCCNKT*KEVDNHAVKCLFSNLQIGPKL  1112
                *K*FDKRAH+* REFHS H R SRHS+ FWEVHQAILSWLCCKREDKHT *VSVC * F F*R IL*PISKYQCS+GGSLHKV+DLQ+W +YM VPSILWF*CA**  **SDY FT+*V C G  NL WQGGS* G CA FR QTSL*GTR +I*CC+LIEIKRSDL***ALVLHCCNKT*+EVD+HAV+CLFSNL+IGPKL
Subject   6675  *K*FDKRAHY*RREFHSFHGRRSRHSKPFWEVHQAILSWLCCKREDKHTR*VSVCE*LF*F*RVIL*PISKYQCSKGGSLHKVKDLQVWQKYM*VPSILWF*CA**QV**SDYRFTI*VGC*GCANLLWQGGS*LGSCA*FRFQTSL*GTRYYI*CCYLIEIKRSDL***ALVLHCCNKT*EEVDHHAVRCLFSNLRIGPKL  7280

Range 12: 6039 to 6389 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
272.3 bits(588) 0.0 115/117(98%) 0/117(0%) Minus/Plus
Query     1398  AWVFCHNEIYG*SQYLFVQHNGKYVVYLLKVRTDRVRVNCVCGR*YVRKQQIKA*N*A*RFPEYDLP*G*STIRHKPYILWMVFVQRRDL*ETSIDLGENLHCS*NG*PGKLH**LC  1748
                AWVFCHNEIYG*SQYLFVQHNGKYVVYLLKVRTDRVRVNCVCGR*YVRKQQIKA*N*A*RFPEYDLP*G*STIRHKPYILWMVFVQRRDL*ETS+DLGENLHCS*NG PGKLH**LC
Subject   6039  AWVFCHNEIYG*SQYLFVQHNGKYVVYLLKVRTDRVRVNCVCGR*YVRKQQIKA*N*A*RFPEYDLP*G*STIRHKPYILWMVFVQRRDL*ETSVDLGENLHCS*NGQPGKLH**LC  6389

Range 13: 7494 to 7781 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
219.6 bits(473) 0.0 95/96(99%) 0/96(0%) Minus/Plus
Query        6  **Y*RPPYMYYLFGILVLVGAVIATLILAHVDSNNGDSKGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDCHC*HC*MASP  293
                **Y*RPPYMYYLFGILVLVGAVIATLILAHVDSNNGDSKGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEID HC*HC*MASP
Subject   7494  **Y*RPPYMYYLFGILVLVGAVIATLILAHVDSNNGDSKGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HC*MASP  7781

Range 14: 7323 to 7457 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.4 bits(215) 0.0 43/45(96%) 0/45(0%) Minus/Plus
Query      330  IS*ESQICHTQGTTYINFHMEDVIGTAPKA*HIVVPDSLSRALGF  464
                IS*ESQIC TQGTTYINFHMEDVIGTAPKA*HIVVPDSLS+ALGF
Subject   7323  IS*ESQICRTQGTTYINFHMEDVIGTAPKA*HIVVPDSLSQALGF  7457

Range 15: 6461 to 6568 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.2 bits(173) 0.0 34/36(94%) 0/36(0%) Minus/Plus
Query     1219  RTTTVCGSWLEISTR*DAQFLDCLKL*IRP*VFGMV  1326
                RTTTVCGSWLEISTR*DAQFLDCLKL*IRP*VFG++
Subject   6461  RTTTVCGSWLEISTR*DAQFLDCLKL*IRP*VFGII  6568

Range 16: 6611 to 6658 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
33.6 bits(67) 0.0 13/16(81%) 0/16(0%) Minus/Plus
Query     1129  SLWVSIVCSDFQLSFI  1176
                SLWV I CSDFQL FI
Subject   6611  SLWVFIACSDFQLLFI  6658

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 17

Range 1: 6040 to 7713 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1259.8 bits(2743) 0.0 525/558(94%) 0/558(0%) Minus/Plus
Query       74  LGSFAIMRFTGEASTFLFNTMANMLFTFLRYELTGSESIAFAGDDMCANSRLRLKTEHEGFLNMICLKAKVQFVTNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFTAFTAGVPDTPNLSGRYIKPYSPGCAVKGRINILDEYLSVDDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNVRSDGLDEVITGSPFELDVEGVLICFGKEAVDLAVAHDSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCKLGQNCHSVDDRLGHWLGAAFPKKVKFAILRGQHTSISTWRTL*GRHQKHNILWSQTVFPELWAFWSV*EFCTFNNCDSINGLHICTICLEFWFL*AL*LQP*SLHMSTAIMVIVRVVS*GLQGSQY*LKIVAQVRHLLQQLRKC*EV*R  1747
                LGSFAIMRFTGEASTFLFNTMANMLFTFLRYELTGSESIAFAGDDMCANSRLRLKTEHEGFLNMICLKAKVQFVTNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGEL+IEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIREL+TEDE+F AFTAGVPDTPNLSGRYIKPYSPGCAVKG+INILDEYLSV DISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFN+ SD  DEVITGSPFELDVEGVLICFGKEAVDLA AH+SDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATC+LGQN H VDD  GHWLGAAF KKVKFAI RGQHTSISTWR L*G HQKHNILWSQTV P+LWA WSV*EFC FNNC+SING+HICTICLEFWFL*AL LQP*SLHMSTAIMVI+ VVS*GLQGSQY*L+IVAQVR LLQQLRKC EV*R
Subject   6040  LGSFAIMRFTGEASTFLFNTMANMLFTFLRYELTGSESIAFAGDDMCANSRLRLKTEHEGFLNMICLKAKVQFVTNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELAIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELVTEDENFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPVDDWRGHWLGAAFSKKVKFAIFRGQHTSISTWRAL*GWHQKHNILWSQTVIPKLWALWSV*EFCAFNNCNSINGIHICTICLEFWFL*ALQLQP*SLHMSTAIMVIIMVVS*GLQGSQY*LRIVAQVRRLLQQLRKCWEV*R  7713

Range 2: 6040 to 7779 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1083.4 bits(2358) 0.0 484/580(83%) 0/580(0%) Plus/Minus
Query        8  GSPSNNVNNDNQFLHQYG*PLKPSNLLTLP*LLKQVPHLGHNFQLILTPL*PL*DNPYYHHYCCRHVXXXXXXXXXXXEPEFQTDSTYMEAVNTITIIKGAKFSD*PKSPELGKDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDYQLLSMSCCSNVEPVLIIRGRIS*FQ*GDNIKCGTSYLTRKFEVGIVRNRQINCLLAKTN*DALHI*LKR*TSNHFIKPITTHIKTKG*KVLACILTKSAGLGLYEVSLPRNTDILIWVRE*HVKTGNVINRQILIKYVYPPFYSTTRRVWLDVPPRKIGSVGNSGCEGCETLVLSDELSYQTTFTATRNTMNDNWKSEHTIDTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQSRN*ASHLVLISNQEPHTVVVRXXXXXXXXXXXQLTQPVGIGHLNCIIINAIFQVTHFTSNANSLPNQLRFLKDPFFEQTPSTKCRVCDELYFSLKANHIQETFMLSFKP*SAVCAHIIARKRN*LGPCQFVP*EGKQHICHCVEQKGTGFTRKSHYGKRPK  1747
                GSP +NVNNDNQFLHQYG*PLKPSNL  LP*LLKQ PHLGHN QLILTPL*PL*DN  YHHYCCRHVQGLGLQLQRLQEPEFQTDSTYM+AVNTITIIKG KFSD*PKSPELG DCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMP PIVNGV VLAQFAGC*KGISLHD Q LSMSCCSNVEPVLII GRI *FQ*G+NIKC TS+LTRKFE+ I+R+R INCLLAK N*  L+I LK  T NHFI+P+T  IKTKG KVL CI  KSAGL LYEVSLP NTDILIWVR+*HVKT NV  RQILIKYVY PFYSTTRRVWLDVPPR++G V N+G +G E LVLSD+ SY TTFT TRN MN+NWKSEH I+THKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQ RN*A HLVLISN EPHTVVV FNF FIHHFN QL QPVGIG+LNCI+INA+ QVTHFTSNANSLPN+L FLKDPFF+QTPSTKC VCD+L+ S KANHI E FM S KP*SAV AH+IARK N*L PCQFVP*E +QHICHCVEQKGTGFTRKSHY KR K
Subject   6040  GSPYDNVNNDNQFLHQYG*PLKPSNLPALP*LLKQAPHLGHNSQLILTPL*PL*DNHDYHHYCCRHVQGLGLQLQRLQEPEFQTDSTYMDAVNTITIIKGTKFSD*PKSPELGNDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMPTPIVNGVIVLAQFAGC*KGISLHDDQFLSMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSHLTRKFEIRIMRSR*INCLLAKAN*HTLNIQLKWRTCNHFIRPVTMQIKTKGQKVLTCIFAKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYLPFYSTTRRVWLDVPPREVGCVRNAGRKGYEILVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQPRN*APHLVLISN*EPHTVVVCFNFLFIHHFNCQLAQPVGIGYLNCIVINAVLQVTHFTSNANSLPNELGFLKDPFFKQTPSTKCGVCDKLHLSFKANHI*EPFMFSLKP*SAVSAHVIARKSN*LRPCQFVP*ECEQHICHCVEQKGTGFTRKSHYSKRSK  7779

Range 3: 6684 to 7778 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
764.4 bits(1662) 0.0 327/365(90%) 0/365(0%) Plus/Minus
Query        9  ARHLTMLTMTINFFTNMANP*SLQTS*HFLNC*SKCLTWATIFN*Y*LPCSPYETTLTITIIAVDMCKD*GCNYSAYKNQNSKQIVHIWRPLILSQLLKVQNSQTDQKAQSSGKTVWDHNMLCFWCRPYNVLHVEIDVCCPLSMANLTFLGNAAPSQCPSLSSTE*QFWPNLQVAEKAFHCMIINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSESCATAKSTASLPKQIRTPSTSNSNGEPVITSSSPSLRTLKPKDRRYLHVFSPNLQVLDFMK*ASLGTLIF*YGSENSTSKPEMSSTDRYSSSMFILPFTAQPGEYGLMYLPERLGVSGTPAVKAVKLSSSVMSSLIK  1103
                ARH+TMLTM INFFTNMANP*SLQTS HFLNC*SK LTWATI N*Y*LPCSPYETT+ ITIIAVDMCKD*GCN SAYKNQNSKQIVHIW PLIL QLLK QNSQTDQ+AQS G TVWDHNMLCFWC PYN LHVEIDVCCPL+MANLTFL NAAPSQCP  SST * FWPN QVAEKAFHCM+INFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSE CA AKSTASLPKQI TPSTSNSNGEPVITSS  SL  LKPKDRRYLHVFSPNLQV DFMK*ASLGTLIF*YGSEN+TSKPEMS TDRYSSSMFI PFTAQPGEYGLMYLPERLGVSGTPAVKA+K SSSV SSLIK
Subject   6684  ARHMTMLTMIINFFTNMANP*SLQTSQHFLNC*SKRLTWATILN*Y*LPCSPYETTMIITIIAVDMCKD*GCNCSAYKNQNSKQIVHIWMPLILLQLLKAQNSQTDQRAQSLGMTVWDHNMLCFWCHPYNALHVEIDVCCPLNMANLTFLENAAPSQCPRQSSTG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLIF*YGSENNTSKPEMSLTDRYSSSMFIFPFTAQPGEYGLMYLPERLGVSGTPAVKAMKFSSSVTSSLIK  7778

Range 4: 6039 to 6605 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
397.9 bits(862) 0.0 178/189(94%) 0/189(0%) Plus/Minus
Query     1182  VDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSMQFSRLPISRAMQILSQIN*GFLKIPSLNKHHPQNVGFVTNCTLALRQIIFRKPSCSVLSLNLLFAHISSPANAIDSDPVSSYLKKVNNIFAIVLNKKVLASPVNLIMAKDPS  1748
                VDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISI NSP+L*A*DTSIA*LSMQFSRLPISRAMQILSQ++ GFLKIPSLNKHHPQNVGFVTNCTLALRQIIFR PSCSVLSLNLL AH+SSPA AIDSDPVSSYLK VNNIFAIVLNKKVLASPVNLI+AKDPS
Subject   6039  VDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIANSPSL*A*DTSIA*LSMQFSRLPISRAMQILSQMSWGFLKIPSLNKHHPQNVGFVTNCTLALRQIIFRNPSCSVLSLNLLLAHMSSPAKAIDSDPVSSYLKNVNNIFAIVLNKKVLASPVNLIIAKDPS  6605

Range 5: 6692 to 7786 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
632.0 bits(1373) 0.0 307/365(84%) 0/365(0%) Minus/Plus
Query        1  ESSSLRTRVSQPSQPEFPTLPIFLGGTSSHTLLVVL*KGG*TYLMSICLLMTFPVLTCYSLTHIKISVFRGRLTS*SPRPADLVRIHASTFYPLVLMCVVMGLMK*LLVHRLS*MWRAS*FVLARRQLIWRLRTIPTSNFLVRYEVPHLMLSPY*NQEIRPLMISTGSTLLQQDIERS**SCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPRQSFPSSGLFGQSENFAPLIIVIVLTASIYVLSVWNSGSXXXXXXXXXXXXXRQQ*W***GLSHKGYRGVNIN*KLWPK*GTCFNS*GSVRRFEGFRG*PYW*RNXXXXXXXLDGEPLK  1095
                E+ SLRTR+S P +P F T P  LGGTSSHTLLVVL*KG *TYLMSICL +TF VLTCY LTHIKISVF+GRLTS*S RPADL +IH STF PLVL+C+V GLMK*L V  LS M R  *F LARRQLI RLR I  SNFLVR EV HLML PY*NQ IRP MISTGSTLLQQDIER+* SCSEMPFQQPANWAKT+TPLTIG+GIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGP+QSFPSSGLFGQSENF PLIIVIVLTASIYVLSVWNSGSCRRCNCNPNPCTCRQQ*W**  LSHKGYRGVNIN*+LWPK*G CFNS*GS  RFEGFRG*PYW*RN*LSLLTL  GEP +
Subject   6692  ENLSLRTRIS*PLRPAFLTHPTSLGGTSSHTLLVVL*KGR*TYLMSICL*VTFLVLTCYFLTHIKISVFQGRLTS*SQRPADLAKIHVSTFCPLVLICIVTGLMK*LQVRHLSWMLRVC*FALARRQLI*RLRIILISNFLVRCEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIERN*SSCSEMPFQQPANWAKTITPLTIGVGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPKQSFPSSGLFGQSENFVPLIIVIVLTASIYVLSVWNSGSCRRCNCNPNPCTCRQQ*W**SWLSHKGYRGVNIN*ELWPK*GACFNS*GSAGRFEGFRG*PYW*RN*LSLLTLSYGEPTR  7786

Range 6: 6068 to 6430 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
223.8 bits(482) 0.0 98/121(81%) 0/121(0%) Minus/Plus
Query     1357  RVKPVPFCSTQWQICCLPS*GTN*QGPSQLRLRAMICAQTAD*GLKLSMKVS*I*FALRLKYNSSQTLHFVDGVCSKKGSLRNLN*FGREFALLVKWVTWKIALIIMQLRCPMPTGWVSCQ  1719
                RVKPVPFCSTQWQICC  S*GTN*QG SQL LRAM CA TAD*GL+L+MK S*I*FAL+L+ N SQT HFVDGVC KKGSLRN N FGREFALLVKWVTW+ ALI MQLR PMPTGW S Q
Subject   6068  RVKPVPFCSTQWQICCSHS*GTN*QGLSQLLLRAMTCALTAD*GLRLNMKGS*I*FALKLRCNLSQTPHFVDGVCLKKGSLRNPNSFGREFALLVKWVTWRTALITMQLRYPMPTGWASWQ  6430

Range 7: 6438 to 6641 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
140.4 bits(300) 0.0 62/68(91%) 0/68(0%) Minus/Plus
Query     1146  DE*RRS*SALQLCAVPG*K*AQDEMLNFWIV*SYRLGLKCLAWCDYYE*LS*SFVYV*VCGCL*CAQI  1349
                DE*R S*S LQLCAVP *K*AQDE+LNFW+V*SYRLGLKCLAWCDYYE*LS*SFVYV*VCGCL* AQI
Subject   6438  DE*RGS*STLQLCAVPS*K*AQDEVLNFWVV*SYRLGLKCLAWCDYYE*LS*SFVYV*VCGCL*RAQI  6641

Range 8: 6161 to 7477 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
791.9 bits(1722) 0.0 356/439(81%) 0/439(0%) Plus/Minus
Query      310  KILRLTKKPRARERLSGTTICYAFGAVPITSSMWKLMYVVP*VWQI*LS*EMQHQANAQAYRQRSDSFGPICRLLKRHFTA*LSTSFYVLLQQCRTSAYHQRSDLLISIR*QHQMWHLVPHKEV*SRNRAQPPNQLPPCQNKLGRPPHLTQTVNQ*SLHQAHHYAH*NQRIEGTCMYSHQICRSWTL*SEPPSEH*YFDMGQRIARQNRKCHQQTDTHQVCLSSLLQHNQESMA*CTSQKDWECXXXXXXXXXNSRPQ**ALLSNYFYRYQEHYERQLEI*AHYRHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQLLLHSSFQLTTHPTCRHRTPQLHNYQCNFPGYPFHEQCKFSPKSIEVS*RSLL*TNTIHKM*GL*RIVL*P*GKSYSGNLHAQF*ALICCLRTYHRPQ  1626
                KILRLTK+PRA E L GTTICYAFGA+PIT SMWKLMYVVP*+WQI*LS*+MQHQANA A RQR DSFGPI RLLKRHFTA* S SFYVLLQQCRTSAYH+RSD LISIR*QHQM HL PHKEV*++N AQP NQLPPCQ+KL  P H TQ  N *SLHQ  HYA+*NQR EGT MY  QICRS TL*SEPP EH*YFDMGQ+I RQN+KCH QTDTHQVCLSSLLQHNQESMA*CTSQ+ W C+E R *RL*NSRPQ*  LL NYFY YQE YE+QLEI*A Y+HPQTQT*TKL*LSYS**SHHAKHLRPNL*LQT QKLS SSCAYF* GTAHSCS LQL LHSSFQL T P CRHR PQLH+YQC+ PGYPFHEQCKFSPK + VS*RSLL*TNTIHKM GL*+I  * *GKSY G LH Q *ALICC RT HRPQ
Subject   6161  KILRLTKEPRAWE*LFGTTICYAFGAIPITPSMWKLMYVVP*IWQI*LS*KMQHQANAHANRQRGDSFGPIRRLLKRHFTA**SISFYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLAPHKEV*NQNYAQPLNQLPPCQSKLAHPQHPTQMANL*SLHQTCHYAN*NQRTEGTYMYFRQICRSLTL*SEPPLEH*YFDMGQKITRQNQKCHLQTDTHQVCLSSLLQHNQESMA*CTSQRGWVCQERRP*RL*NSRPQ*QVLLLNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*LGTAHSCSVLQLPLHSSFQLPTRPACRHRIPQLHSYQCSSPGYPFHEQCKFSPK*VGVS*RSLL*TNTIHKMWGL*QIAP*L*GKSYLGTLHVQS*ALICC*RTCHRPQ  7477

Range 9: 7532 to 7735 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
131.2 bits(280) 0.0 65/68(96%) 0/68(0%) Plus/Minus
Query       52  PIWLTPKAFKPPNTSLTVEASASLGPQFSINIDSPVALMRQXXXXXXXXXTCARIRVAITAPTRTRIP  255
                PIWLTPKAFKPP+TSLTVEASASLGPQFSINIDSPVALMRQP LSPLLLSTCARIRVAI APTRTRIP
Subject   7532  PIWLTPKAFKPPSTSLTVEASASLGPQFSINIDSPVALMRQP*LSPLLLSTCARIRVAIAAPTRTRIP  7735

Range 10: 6038 to 6088 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.8 bits(74) 0.0 15/17(88%) 0/17(0%) Plus/Minus
Query     1699  KRYWLHP*ISLWQKTQA  1749
                KRYWLHP*ISL QK QA
Subject   6038  KRYWLHP*ISL*QKIQA  6088

Range 11: 6762 to 7283 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
320.4 bits(693) 0.0 141/174(81%) 0/174(0%) Minus/Plus
Query      504  WEVHQAILSWLCCKREDKHT**VSVC**HFRF*RAIL*PISKYQCSEGGSLHKVQDLQIW*EYMQVPSILWF*CA**WA**SDYWFTV*VRCGGRPNLFWQGGS*FGGCARFRLQTSL*GTRCHI*CCHLIEIKRSDL***ALVLHCCNKT*KEVDNHAVKCLFSNLQIGPKLS  1025
                WEVHQAILSWLCCKREDKHT**VSVC *HF F*R I *PISKYQCS+GGSLHKV+DLQIW +YM VPS+LWF* A**  **SDY F +*V C G  NL WQGGS*F GCA F  QTSL*G RC+I*CC+LIEIK SDL **ALVLHCCNKT*KE+D+HAVKCLFSNL+IGPKLS
Subject   6762  WEVHQAILSWLCCKREDKHT**VSVCK*HFWF*RVIF*PISKYQCSKGGSLHKVKDLQIWRKYM*VPSVLWF*FA**QV**SDYRFAI*VGC*GCANLLWQGGS*FSGCA*F*FQTSL*GARCYI*CCYLIEIKGSDLR**ALVLHCCNKT*KEIDHHAVKCLFSNLRIGPKLS  7283

Range 12: 6039 to 6389 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
220.1 bits(474) 0.0 95/117(81%) 0/117(0%) Minus/Plus
Query     1398  AWVFCHNEIYG*SQYLFVQHNGKYVVYLLKVRTDRVRVNCVCGR*YVRKQQIKA*N*A*RFPEYDLP*G*STIRHKPYILWMVFVQRRDL*ETSIDLGENLHCS*NG*PGKLH**LC  1748
                AW+FC+NEIYG*SQYLFVQHNGKYVV++LKVRTDRV VNC CGR*+VR QQIKA*+* *R P+YDLP* *  I HKP+ILWMVFV RRDL*ET   LGENLHCS*NG*PG+LH**LC
Subject   6039  AWIFCYNEIYG*SQYLFVQHNGKYVVHILKVRTDRV*VNCFCGR*HVR*QQIKA*D*T*RVPKYDLP*S*GAICHKPHILWMVFV*RRDL*ETPTHLGENLHCS*NG*PGELH**LC  6389

Range 13: 7494 to 7781 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
207.3 bits(446) 0.0 90/96(94%) 0/96(0%) Minus/Plus
Query        6  **Y*RPPYMYYLFGILVLVGAVIATLILAHVDSNNGDSKGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDCHC*HC*MASP  293
                **Y*R PYMYYLFGILVLVGA IATLILAHVDSNNGD+ GCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEID HC*HC MASP
Subject   7494  **Y*RHPYMYYLFGILVLVGAAIATLILAHVDSNNGDNHGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HCHMASP  7781

Range 14: 7323 to 7454 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
85.4 bits(180) 0.0 37/44(84%) 0/44(0%) Minus/Plus
Query      333  IS*ESQICHTQGTTYINFHMEDVIGTAPKA*HIVVPDSLSRALG  464
                I *ESQICH QGTTYINFHME VIG APKA*HIVVP+S S+ALG
Subject   7323  IF*ESQICHIQGTTYINFHMEGVIGMAPKA*HIVVPNSHSQALG  7454

Range 15: 6464 to 6571 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
69.3 bits(145) 0.0 33/36(92%) 0/36(0%) Minus/Plus
Query     1216  TTTVCGSWLEISTR*DAQFLDCLKL*IRP*VFGMV*  1323
                TTTVCGS LEISTR* AQFL CLKL*IRP*VFGMV*
Subject   6464  TTTVCGS*LEISTR*GAQFLGCLKL*IRP*VFGMV*  6571

Range 16: 6611 to 6658 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
33.6 bits(67) 0.0 13/16(81%) 0/16(0%) Minus/Plus
Query     1129  SLWVSIVCSDFQLSFI  1176
                SLWV I CSDFQL FI
Subject   6611  SLWVFIACSDFQLLFI  6658

Range 17: 6675 to 6719 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
26.7 bits(52) 0.0 12/15(80%) 0/15(0%) Minus/Plus
Query     1068  *K*FDKRAHH*GREF  1112
                *K*F+KR  H*GREF
Subject   6675  *K*FNKRTCH*GREF  6719

Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OB1

Sequence ID: AB277783.1 Length: 2876 Number of Matches: 16

Range 1: 296 to 1969 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1272.6 bits(2771) 0.0 528/558(95%) 0/558(0%) Minus/Plus
Query       74  LGSFAIMRFTGEASTFLFNTMANMLFTFLRYELTGSESIAFAGDDMCANSRLRLKTEHEGFLNMICLKAKVQFVTNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFTAFTAGVPDTPNLSGRYIKPYSPGCAVKGRINILDEYLSVDDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNVRSDGLDEVITGSPFELDVEGVLICFGKEAVDLAVAHDSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCKLGQNCHSVDDRLGHWLGAAFPKKVKFAILRGQHTSISTWRTL*GRHQKHNILWSQTVFPELWAFWSV*EFCTFNNCDSINGLHICTICLEFWFL*AL*LQP*SLHMSTAIMVIVRVVS*GLQGSQY*LKIVAQVRHLLQQLRKC*EV*R  1747
                LGSFAIMRFTGEASTFLFNTMANMLFTFLRYELTGSESIAFAGDDMCANSRLRLKTEHEGFLNMICLKAKVQFVTNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALS+WHGVIIMNNLVKALSTFEFVG+YSVLRFPVVVHSVPGSGKSSLIREL+TEDESF AFTAGVPDTPNLSGRYIKPYSPGCAVKG+INILDEYLSV DISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFN+ SD  DEVITGSPFELDVEGVLICFGKEAVDLA AH+SDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATC+LGQN H +DD LGHWL A+FPKKVKFAILRGQHTSISTWR L*GRHQKHNILWSQTV P+LWAFWSV*EFC FNNC+SINGLHICTICLEFWFL*AL LQP*SLHMSTAIMVI+ VVS*GLQGSQY*L+IVAQVR LLQQLRKC EV*R
Subject    296  LGSFAIMRFTGEASTFLFNTMANMLFTFLRYELTGSESIAFAGDDMCANSRLRLKTEHEGFLNMICLKAKVQFVTNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHGVIIMNNLVKALSTFEFVGIYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPIDDWLGHWLSASFPKKVKFAILRGQHTSISTWRAL*GRHQKHNILWSQTVIPKLWAFWSV*EFCAFNNCNSINGLHICTICLEFWFL*ALQLQP*SLHMSTAIMVIIMVVS*GLQGSQY*LRIVAQVRRLLQQLRKCWEV*R  1969

Range 2: 719 to 2035 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
835.0 bits(1816) 0.0 371/439(85%) 0/439(0%) Plus/Minus
Query        8  GSPSNNVNNDNQFLHQYG*PLKPSNLLTLP*LLKQVPHLGHNFQLILTPL*PL*DNPYYHHYCCRHVXXXXXXXXXXXEPEFQTDSTYMEAVNTITIIKGAKFSD*PKSPELGKDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDYQLLSMSCCSNVEPVLIIRGRIS*FQ*GDNIKCGTSYLTRKFEVGIVRNRQINCLLAKTN*DALHI*LKR*TSNHFIKPITTHIKTKG*KVLACILTKSAGLGLYEVSLPRNTDILIWVRE*HVKTGNVINRQILIKYVYPPFYSTTRRVWLDVPPRKIGSVGNSGCEGCETLVLSDELSYQTTFTATRNTMNDNWKSEHTIDTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQSRN*ASHLVLISNQEPHTVVV  1324
                GSP +NVNNDNQFLHQYG*PLKPSNL TLP*LLKQ PHLGHN QLILTPL*PL*DN  YHHYCCRHVQGLGLQLQRLQEPEFQTDSTYMEAVNTITIIKG KFSD*PKSPELG DCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRK STKPMPKPIVNGV VLAQFAGC*KGISLHD Q LSMSCCSNVEPVLII GRI *FQ*G+NIKC TSYLTRKFE+GI+R+R INCLLAK N   L+I LK    NHFI+P+T  IKTKG KVL CI  KSAGL LYEVSLP NTDILIWVR+*HVKT NV  RQILIKYVY P YSTTRRVWL+VPPR++GSVGN+G +G ETLVLSD+ SY T FT TRN +N+NWKSEH I+THKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQ RN*A HLV ISN EPHTVVV
Subject    719  GSPYDNVNNDNQFLHQYG*PLKPSNLPTLP*LLKQAPHLGHNSQLILTPL*PL*DNHDYHHYCCRHVQGLGLQLQRLQEPEFQTDSTYMEAVNTITIIKGTKFSD*PKSPELGNDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRK*STKPMPKPIVNGVIVLAQFAGC*KGISLHDDQFLSMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSYLTRKFEIGIMRSR*INCLLAKANQHTLNIQLKWRACNHFIRPVTMQIKTKGQKVLTCIFAKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYLPLYSTTRRVWLNVPPREVGSVGNAGRKGYETLVLSDKFSY*TAFTTTRNAVNNNWKSEHAINTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQPRN*APHLVFISN*EPHTVVV  2035

Range 3: 940 to 2034 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
770.4 bits(1675) 0.0 331/365(91%) 0/365(0%) Plus/Minus
Query        9  ARHLTMLTMTINFFTNMANP*SLQTS*HFLNC*SKCLTWATIFN*Y*LPCSPYETTLTITIIAVDMCKD*GCNYSAYKNQNSKQIVHIWRPLILSQLLKVQNSQTDQKAQSSGKTVWDHNMLCFWCRPYNVLHVEIDVCCPLSMANLTFLGNAAPSQCPSLSSTE*QFWPNLQVAEKAFHCMIINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSESCATAKSTASLPKQIRTPSTSNSNGEPVITSSSPSLRTLKPKDRRYLHVFSPNLQVLDFMK*ASLGTLIF*YGSENSTSKPEMSSTDRYSSSMFILPFTAQPGEYGLMYLPERLGVSGTPAVKAVKLSSSVMSSLIK  1103
                ARH+TMLTM INFFTNMANP*SLQTS HFLNC*SK LTWATI N*Y*LPCSPYETT+ ITIIAVDMCKD*GCN SAYKNQNSKQIVHIWRPLIL QLLK QNSQTDQKAQS G TVWDHNMLCFWCRPYN LHVEIDVCCPLSMANLTFLGN A SQCPS SS  * FWPN QVAEKAFHCM+INFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSE CA AKSTASLPKQI TPSTSNSNGEPVITSS  SL  LKPKDRRYLHVFSPNLQV DFMK*ASLGTLIF*YGSEN+TSKPEMS TDRYSSSMFI PFTAQPGEYGLMYLPERLGVSGTPAVKA+KLSSSV SSLIK
Subject    940  ARHMTMLTMIINFFTNMANP*SLQTSQHFLNC*SKRLTWATILN*Y*LPCSPYETTMIITIIAVDMCKD*GCNCSAYKNQNSKQIVHIWRPLILLQLLKAQNSQTDQKAQSLGMTVWDHNMLCFWCRPYNALHVEIDVCCPLSMANLTFLGNEALSQCPSQSSMG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLIF*YGSENNTSKPEMSLTDRYSSSMFIFPFTAQPGEYGLMYLPERLGVSGTPAVKAMKLSSSVTSSLIK  2034

Range 4: 295 to 861 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
398.8 bits(864) 0.0 178/189(94%) 0/189(0%) Plus/Minus
Query     1182  VDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSMQFSRLPISRAMQILSQIN*GFLKIPSLNKHHPQNVGFVTNCTLALRQIIFRKPSCSVLSLNLLFAHISSPANAIDSDPVSSYLKKVNNIFAIVLNKKVLASPVNLIMAKDPS  1748
                VDKALTKLFIIITPCQ LKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSP+L*A*DTSIA*LSMQFSRLPISRAMQILSQ++ GFLKIPSLNKHHPQNVGFVTNCTLALRQIIFR PSCSVLSLNLL AH+SSPA AIDSDPVSSYLK VNNIFAIVLNKKVLASPVNLI+AKDPS
Subject    295  VDKALTKLFIIITPCQILKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISRAMQILSQMSWGFLKIPSLNKHHPQNVGFVTNCTLALRQIIFRNPSCSVLSLNLLLAHMSSPAKAIDSDPVSSYLKNVNNIFAIVLNKKVLASPVNLIIAKDPS  861

Range 5: 296 to 682 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
255.4 bits(551) 0.0 104/129(81%) 0/129(0%) Plus/Minus
Query     1361  QLTQPVGIGHLNCIIINAIFQVTHFTSNANSLPNQLRFLKDPFFEQTPSTKCRVCDELYFSLKANHIQETFMLSFKP*SAVCAHIIARKRN*LGPCQFVP*EGKQHICHCVEQKGTGFTRKSHYGKRPK  1747
                QL QPVGIG+LNCI+INA+ QVTHFTSNANSLPN+L FLKDPFF+QTPSTKC VCD+L+ S KANHI E FM S KP*SAV AH+IARK N*LGPCQFVP*E KQHI HCV+QKGTGFTRKSHY KR K
Subject    296  QLAQPVGIGYLNCIVINAVLQVTHFTSNANSLPNELGFLKDPFFKQTPSTKCGVCDKLHLSFKANHI*EPFMFSLKP*SAVSAHVIARKSN*LGPCQFVP*ECKQHIRHCVKQKGTGFTRKSHYSKRSK  682

Range 6: 694 to 1539 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
449.2 bits(974) 0.0 225/282(80%) 0/282(0%) Minus/Plus
Query      504  DE*RRS*SALQLCAVPG*K*AQDEMLNFWIV*SYRLGLKCLAWCDYYE*LS*SFVYV*VCGCL*CAQIXXXXXXXXXXR*K*FDKRAHH*GREFXXXXXXXXXXXXSFWEVHQAILSWLCCKREDKHT**VSVC**HFRF*RAIL*PISKYQCSEGGSLHKVQDLQIW*EYMQVPSILWF*CA**WA**SDYWFTV*VRCGGRPNLFWQGGS*FGGCARFRLQTSL*GTRCHI*CCHLIEIKRSDL***ALVLHCCNKT*KEVDNHAVKCLFSNLQIGPKLS  1349
                DE*R S*S LQLCAVP *K* QDE+LNFW+V*SYRLGLK LAWCDYYE*LS*SFVYV*VCG L* AQISSC S  SW* *K F+KR  H*GREFHSL+ R SRHSQ  WEVH AILSWLCCK EDKHT**VSVC *HF F*R I *PISKYQCS+GGSLHKV+DLQIW +YM VPS+LWF* A**  **SDY   +*V C G  +L WQGGS*F GCA FR QTSL*GTRC+I*CC+LIEIK SDL **ALVLHCCNKT*KE+D+HAVKCLFSNL+IGPKLS
Subject    694  DE*RGS*STLQLCAVPS*K*TQDEVLNFWVV*SYRLGLKYLAWCDYYE*LS*SFVYV*VCGYL*RAQISSCCSQRSW*W*KQFNKRTCH*GREFHSLYGRRSRHSQPLWEVH*AILSWLCCKGEDKHT**VSVCK*HFWF*RVIF*PISKYQCSKGGSLHKVKDLQIWRKYM*VPSVLWF*FA**QV**SDYRLAI*VGC*GCADLLWQGGS*FSGCA*FRFQTSL*GTRCYI*CCYLIEIKGSDLR**ALVLHCCNKT*KEIDHHAVKCLFSNLRIGPKLS  1539

Range 7: 324 to 686 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
231.5 bits(499) 0.0 99/121(82%) 0/121(0%) Minus/Plus
Query     1357  RVKPVPFCSTQWQICCLPS*GTN*QGPSQLRLRAMICAQTAD*GLKLSMKVS*I*FALRLKYNSSQTLHFVDGVCSKKGSLRNLN*FGREFALLVKWVTWKIALIIMQLRCPMPTGWVSCQ  1719
                RVKPVPFC TQW+ICCL S*GTN*QGPSQL LRAM CA TAD*GL+L+MK S*I*FAL+L+ N SQT HFVDGVC KKGSLRN N FGREFALLVKWVTW+ ALI MQLR PMPTGW SCQ
Subject    324  RVKPVPFCLTQWRICCLHS*GTN*QGPSQLLLRAMTCALTAD*GLRLNMKGS*I*FALKLRCNLSQTPHFVDGVCLKKGSLRNPNSFGREFALLVKWVTWRTALITMQLRYPMPTGWASCQ  686

Range 8: 1750 to 2037 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
210.9 bits(454) 0.0 90/96(94%) 0/96(0%) Minus/Plus
Query        6  **Y*RPPYMYYLFGILVLVGAVIATLILAHVDSNNGDSKGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDCHC*HC*MASP  293
                **Y*RPPYMYYLFGILVLVGA IATLILAHVDSNNGD+ GCLIRATGESILIENCGPSEALAST+KEVLGGLKALGVSHIGEEID HC*HC MASP
Subject   1750  **Y*RPPYMYYLFGILVLVGAAIATLILAHVDSNNGDNHGCLIRATGESILIENCGPSEALASTIKEVLGGLKALGVSHIGEEIDYHC*HCHMASP  2037

Range 9: 1579 to 1713 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
96.4 bits(204) 0.0 41/45(91%) 0/45(0%) Minus/Plus
Query      330  IS*ESQICHTQGTTYINFHMEDVIGTAPKA*HIVVPDSLSRALGF  464
                IS*ESQICHTQGTTYINFHME VIGTAPKA*HIVVP+S S+ALGF
Subject   1579  IS*ESQICHTQGTTYINFHMEGVIGTAPKA*HIVVPNSHSQALGF  1713

Range 10: 948 to 2042 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
644.9 bits(1401) 0.0 310/365(85%) 0/365(0%) Minus/Plus
Query        1  ESSSLRTRVSQPSQPEFPTLPIFLGGTSSHTLLVVL*KGG*TYLMSICLLMTFPVLTCYSLTHIKISVFRGRLTS*SPRPADLVRIHASTFYPLVLMCVVMGLMK*LLVHRLS*MWRAS*FVLARRQLIWRLRTIPTSNFLVRYEVPHLMLSPY*NQEIRPLMISTGSTLLQQDIERS**SCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPRQSFPSSGLFGQSENFAPLIIVIVLTASIYVLSVWNSGSXXXXXXXXXXXXXRQQ*W***GLSHKGYRGVNIN*KLWPK*GTCFNS*GSVRRFEGFRG*PYW*RNXXXXXXXLDGEPLK  1095
                E+ SLRTRVS P +P FPTLP  LGGT SHTLLVVL*+G *TYLMSICL +TF VLTCY LTHIKISVF+GRLTS*S RPADL +IH STF PLVL+C+V GLMK*L    LS M R  *F LARRQLI RLR IP SNFLVRYEV HLML PY*NQ IRP MISTGSTLLQQDIER+* SCSEMPFQQPANWAKT+TPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGP+QSFPSSGLFGQSENF PLIIVIVLTASIYVLSVWNSGSCRRCNCNPNPCTCRQQ*W**  LSHKGYRGVNIN*+LWPK*G CFN+*GSV RFEGFRG*PYW*RN*LSLLTL  GEP +
Subject    948  ENLSLRTRVS*PLRPAFPTLPTSLGGTLSHTLLVVL*RGR*TYLMSICL*VTFLVLTCYFLTHIKISVFQGRLTS*SQRPADLAKIHVSTFCPLVLICIVTGLMK*LQARHLSWMLRVC*FALARRQLI*RLRIIPISNFLVRYEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIERN*SSCSEMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPKQSFPSSGLFGQSENFVPLIIVIVLTASIYVLSVWNSGSCRRCNCNPNPCTCRQQ*W**SWLSHKGYRGVNIN*ELWPK*GACFNN*GSVGRFEGFRG*PYW*RN*LSLLTLSYGEPTR  2042

Range 11: 295 to 645 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
220.5 bits(475) 0.0 95/117(81%) 0/117(0%) Minus/Plus
Query     1398  AWVFCHNEIYG*SQYLFVQHNGKYVVYLLKVRTDRVRVNCVCGR*YVRKQQIKA*N*A*RFPEYDLP*G*STIRHKPYILWMVFVQRRDL*ETSIDLGENLHCS*NG*PGKLH**LC  1748
                AW+FC+NEIYG*SQYLFV HNG+YVVY+LKVRTDRVRVNC CGR*+VR QQIKA*+* *R P+YDLP* *  I HKP+ILWMVFV RRDL*ET   LGENLHCS*NG*PG+LH**LC
Subject    295  AWIFCYNEIYG*SQYLFV*HNGEYVVYILKVRTDRVRVNCFCGR*HVR*QQIKA*D*T*RVPKYDLP*S*GAICHKPHILWMVFV*RRDL*ETPTHLGENLHCS*NG*PGELH**LC  645

Range 12: 720 to 827 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.0 bits(142) 0.0 32/36(89%) 0/36(0%) Minus/Plus
Query     1216  TTTVCGSWLEISTR*DAQFLDCLKL*IRP*VFGMV*  1323
                TTTVCGS LEI+TR* AQFL CLKL*IRP*VFGMV*
Subject    720  TTTVCGS*LEINTR*GAQFLGCLKL*IRP*VFGMV*  827

Range 13: 867 to 911 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.8 bits(63) 0.0 12/15(80%) 0/15(0%) Minus/Plus
Query     1132  SLWVSIVCSDFQLSF  1176
                SLWV I CSDFQL F
Subject    867  SLWVFIACSDFQLLF  911

Range 14: 417 to 1733 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
775.0 bits(1685) 0.0 355/439(81%) 0/439(0%) Plus/Minus
Query      310  KILRLTKKPRARERLSGTTICYAFGAVPITSSMWKLMYVVP*VWQI*LS*EMQHQANAQAYRQRSDSFGPICRLLKRHFTA*LSTSFYVLLQQCRTSAYHQRSDLLISIR*QHQMWHLVPHKEV*SRNRAQPPNQLPPCQNKLGRPPHLTQTVNQ*SLHQAHHYAH*NQRIEGTCMYSHQICRSWTL*SEPPSEH*YFDMGQRIARQNRKCHQQTDTHQVCLSSLLQHNQESMA*CTSQKDWECXXXXXXXXXNSRPQ**ALLSNYFYRYQEHYERQLEI*AHYRHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQLLLHSSFQLTTHPTCRHRTPQLHNYQCNFPGYPFHEQCKFSPKSIEVS*RSLL*TNTIHKM*GL*RIVL*P*GKSYSGNLHAQF*ALICCLRTYHRPQ  1626
                KILRLTKKPRA E L GTTICYAFGAVPIT SMWKLMYVVP*VWQI*LS*EM+H ANAQA RQ  DSFGPI RLLKRHFTA* S SFYVLLQQCRTSAYH+RSD LISIR*QHQM HLVPHKEV*+RN AQP NQLPPCQ+K   P H TQ  + *SLHQ  HYA+*NQR EGT MY  QICRS TL*SEPP EH*YFDMGQ+I RQN+KCH QTDTHQVCLSS LQHNQESMA*CTSQ+ WECRE R *RL*NSRPQ*  LL N FY YQE  E+QLEI*A Y++PQTQT*TKL*LSYS**SHHAK+LRPNL*LQT QKLS SSC YF* GTAHSCS LQL LHSSFQLTT P CRHR PQLH+YQC+ PGYPFHEQCKFSPK + VS*RSLL*TNTIHKM GL*+I  * *GKSY G LH Q *ALICC RT HRPQ
Subject    417  KILRLTKKPRAWE*LFGTTICYAFGAVPITPSMWKLMYVVP*VWQI*LS*EMKH*ANAQANRQWGDSFGPIRRLLKRHFTA**SISFYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLVPHKEV*NRNYAQPLNQLPPCQSKSAHPQHPTQMASL*SLHQTCHYAN*NQRTEGTYMYFRQICRSLTL*SEPPLEH*YFDMGQKITRQNQKCHLQTDTHQVCLSSPLQHNQESMA*CTSQRGWECRERRP*RL*NSRPQ*QVLLLNCFYHYQERCEQQLEI*ARYKYPQTQT*TKL*LSYS**SHHAKYLRPNL*LQTTQKLSTSSCVYF*LGTAHSCSVLQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFHEQCKFSPK*VGVS*RSLL*TNTIHKMWGL*QIAP*L*GKSYLGTLHVQS*ALICC*RTCHRPQ  1733

Range 15: 1788 to 1991 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
130.7 bits(279) 0.0 65/68(96%) 0/68(0%) Plus/Minus
Query       52  PIWLTPKAFKPPNTSLTVEASASLGPQFSINIDSPVALMRQXXXXXXXXXTCARIRVAITAPTRTRIP  255
                PIWLTPKAFKPPNTSL VEASASLGPQFSINIDSPVALMRQP LSPLLLSTCARIRVAI APTRTRIP
Subject   1788  PIWLTPKAFKPPNTSLIVEASASLGPQFSINIDSPVALMRQP*LSPLLLSTCARIRVAIAAPTRTRIP  1991

Range 16: 294 to 344 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.8 bits(74) 0.0 15/17(88%) 0/17(0%) Plus/Minus
Query     1699  KRYWLHP*ISLWQKTQA  1749
                KRYWLHP*ISL QK QA
Subject    294  KRYWLHP*ISL*QKIQA  344

Grapevine Rupestris stem pitting associated virus, complete genome

Sequence ID: AF026278.1 Length: 8725 Number of Matches: 19

Range 1: 6040 to 7713 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1067.3 bits(2323) 0.0 445/558(80%) 0/558(0%) Minus/Plus
Query       74  LGSFAIMRFTGEASTFLFNTMANMLFTFLRYELTGSESIAFAGDDMCANSRLRLKTEHEGFLNMICLKAKVQFVTNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFTAFTAGVPDTPNLSGRYIKPYSPGCAVKGRINILDEYLSVDDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNVRSDGLDEVITGSPFELDVEGVLICFGKEAVDLAVAHDSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCKLGQNCHSVDDRLGHWLGAAFPKKVKFAILRGQHTSISTWRTL*GRHQKHNILWSQTVFPELWAFWSV*EFCTFNNCDSINGLHICTICLEFWFL*AL*LQP*SLHMSTAIMVIVRVVS*GLQGSQY*LKIVAQVRHLLQQLRKC*EV*R  1747
                LGSF+IMRFTGEASTFLFNTMANMLFTFLRYELTGSESIAFAGDDMCAN RLRLKTEHEGFLNMICLKAKVQFV+NPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMM EEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALS+WH + IMNNLVKALSTFEFVGV+SVL+FPVV+HSVPGSGKSSLIRELI+EDE+F AFTAGVPD+PNL+GRYIKPYSPGCAV G++NILDEYLSV D SGFDVLFSDPYQNIS+P+EAHFIKSKTCRFG NTCKYL SFGF V SDGLD+VI GSPF LDVEGVLICFGKEAVDLAVAH+S+FKLPCEVRG+TF+VVTLLKSRDPT +D+HWFYIAATRHR+KLIIMQ*+AFSA C+LG+N +S+D  LGHW  AAFP++VK  + RGQH SIS+   L GR++K+N+LWS+ + P LW    +*EFC  N C   N +H C +CLEFW  * L*L   SL M TA++ I +V S G   SQ+*LK  AQVR L    R+C*EV*R
Subject   6040  LGSFSIMRFTGEASTFLFNTMANMLFTFLRYELTGSESIAFAGDDMCANRRLRLKTEHEGFLNMICLKAKVQFVSNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHYLSIMNNLVKALSTFEFVGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDKVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWLGHWACAAFPEEVKSTLFRGQHPSISSRWALQGRYKKYNLLWSKAILP*LWDIRPI*EFCALNACHRSNRIHTCIVCLEFWSW*EL*LPSKSLLM*TAVVAITKVASLGPLESQF*LKTAAQVRPLHPL*RRC*EV*R  7713

Range 2: 6684 to 7772 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
498.7 bits(1082) 0.0 232/363(64%) 0/363(0%) Plus/Minus
Query       15  HLTMLTMTINFFTNMANP*SLQTS*HFLNC*SKCLTWATIFN*Y*LPCSPYETTLTITIIAVDMCKD*GCNYSAYKNQNSKQIVHIWRPLILSQLLKVQNSQTDQKAQSSGKTVWDHNMLCFWCRPYNVLHVEIDVCCPLSMANLTFLGNAAPSQCPSLSSTE*QFWPNLQVAEKAFHCMIINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSESCATAKSTASLPKQIRTPSTSNSNGEPVITSSSPSLRTLKPKDRRYLHVFSPNLQVLDFMK*ASLGTLIF*YGSENSTSKPEMSSTDRYSSSMFILPFTAQPGEYGLMYLPERLGVSGTPAVKAVKLSSSVMSSLIK  1103
                H   LTM INFF + ANP*SLQTS*H L+   K LTWA +FN* *L   P E TL I   AV M KD   NY++Y++QNSKQ +H+   L L Q L+ QNSQ  + +QS G+   DH+ L F  RP N    EID CCPL+  +LT  GNAA +QCPS  S E  F PN Q AEKA +CMIINF LCLVAAM*NQCLSS VGSLDF +VTT  V P TSQG+L SE CATA+STASLPK I TPSTS+  G+P +T S PSL TLKPK+ RYL VF+PNLQV D MK ASLG L+F YGSENSTSKPE S TD+YSSSMF  P TA PGE GLMYLP RLG+SGTPAVKA+K SSS +SSLIK
Subject   6684  HSANLTMIINFFNSTANP*SLQTS*HLLHSGCKGLTWAAVFN*N*LSSGPNEATLVIATTAVYMSKDLDGNYNSYQDQNSKQTIHV*MRLDL*QALRAQNSQIGRISQS*GRIALDHSKLYFLYRPCNAHREEIDGCCPLNKVDLTSSGNAAQAQCPSQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSELCATARSTASLPKHISTPSTSSVKGDPTMTLSKPSLLTLKPKEERYLQVFTPNLQVFDLMKCASLGMLMFWYGSENSTSKPEKSWTDKYSSSMFTFPGTAHPGE*GLMYLPVRLGLSGTPAVKAMKFSSSEISSLIK  7772

Range 3: 6039 to 6605 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
332.4 bits(719) 0.0 153/189(81%) 0/189(0%) Plus/Minus
Query     1182  VDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSMQFSRLPISRAMQILSQIN*GFLKIPSLNKHHPQNVGFVTNCTLALRQIIFRKPSCSVLSLNLLFAHISSPANAIDSDPVSSYLKKVNNIFAIVLNKKVLASPVNLIMAKDPS  1748
                VD ALTKLFII+  CQ LKA*SIASN PEIEHLILCLFLT+N TQL* ASTSSS IIS+D+SP+  A*+TSIA*LS+QFSRLPIS AM I SQIN*GFLKIPSLNKHHPQNVG  TN TLALRQI+FRKPSCSVLS NL  AH+SSPANAIDS+PVSSYL+KVNN+ AIVLNK VLASPVNLI+  DPS
Subject   6039  VDNALTKLFIILK*CQILKA*SIASNRPEIEHLILCLFLTKNLTQL*WASTSSSVIISMDSSPSRYA*ETSIA*LSIQFSRLPISLAMHIRSQIN*GFLKIPSLNKHHPQNVGLETN*TLALRQIMFRKPSCSVLSRNLRLAHMSSPANAIDSEPVSSYLRKVNNMLAIVLNKNVLASPVNLIIENDPS  6605

Range 4: 6463 to 7773 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
532.1 bits(1155) 0.0 254/437(58%) 0/437(0%) Plus/Minus
Query       14  PSNNVNNDNQFLHQYG*PLKPSNLLTLP*LLKQVPHLGHNFQLILTPL*PL*DNPYYHHYCCRHVXXXXXXXXXXXEPEFQTDSTYMEAVNTITIIKGAKFSD*PKSPELGKDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDYQLLSMSCCSNVEPVLIIRGRIS*FQ*GDNIKCGTSYLTRKFEVGIVRNRQINCLLAKTN*DALHI*LKR*TSNHFIKPITTHIKTKG*KVLACILTKSAGLGLYEVSLPRNTDILIWVRE*HVKTGNVINRQILIKYVYPPFYSTTRRVWLDVPPRKIGSVGNSGCEGCETLVLSDELSYQTTFTATRNTMNDNWKSEHTIDTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQSRN*ASHLVLISNQEPHTVVV  1324
                P +  NNDNQFL QYG*PLKPSNLLT P    Q PHLG +FQL LT   P * N    HYCC H QG G QLQ L  PEFQTD+T M A+  +T IKG KFSD P  PELGKDC GPQ V+L VPSL*RPP GN* MLSPE G+FDFLRKCST PMPKP VNGV V AQFAGC*KGI LHDYQ L +SC SNV+PV I+ G IS*FQ   ++K  TS  TR FE  +VRN +I+CLLAK  *   +I  KR   N F++ +T ++KT+G K+ A I  K     L E+ L RN D+L+WVRE H+KT  +++ Q+LIKYV+ P + T  R+ L+VP  +I +V N+ CE  E L+L + L Y TTFT TR+TMND WK +HT +T+KLK  Q FN*+IHN   MPNT*GLI  FK + N*ASHL+L+ +QE +T+++
Subject   6463  PFSQFNNDNQFLQQYG*PLKPSNLLTPPSQWMQGPHLGRSFQLKLTLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAIRPMTSIKGTKFSDWPNIPELGKDCFGPQ*VILFVPSL*RPP*GN*WMLSPE*GRFDFLRKCSTSPMPKPTVNGVMVFAQFAGC*KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVVRNGEIHCLLAKAY*HPFNIQCKRRPHNDFVQTVTANLKTEGGKIFASIHAKPTSF*LDEMCLFRNADVLVWVREQHIKT*KILDGQVLIKYVHFPRHCTPWRIRLNVPSCEIRAVWNTCCESYEILILGN*LPY*TTFTTTRHTMNDYWKFKHTENTYKLKC*QCFN*IIHNTQIMPNT*GLINRFK*A*N*ASHLMLVPDQESNTIIM  7773

Range 5: 6055 to 6423 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
150.0 bits(321) 0.0 65/123(53%) 0/123(0%) Plus/Minus
Query     1364  LTQPVGIGHLNCIIINAIFQVTHFTSNANSLPNQLRFLKDPFFEQTPSTKCRVCDELYFSLKANHIQETFMLSFKP*SAVCAHIIARKRN*LGPCQFVP*EGKQHICHCVEQKGTGFTRKSHY  1732
                L+QPV IG L  II+N I QVTH  SNA  LP+ LR L+DPF + TPS +C + ++L   LKANH+Q+T ML FKP  ++  H+I  K  *L  CQFVP +G+QH+ H V+QK  GF  K HY
Subject   6055  LSQPVRIGDLYRIIVNTILQVTHLPSNAYPLPD*LRLLEDPFLK*TPSAECGIGNKLNLGLKANHVQKTLMLCFKPQPSISTHVITCKCY*LRACQFVPQKGEQHVSHSVKQKCAGFPCKPHY  6423

Range 6: 6707 to 7543 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
349.8 bits(757) 0.0 172/279(62%) 0/279(0%) Minus/Plus
Query      244  RTRVSQPSQPEFPTLPIFLGGTSSHTLLVVL*KGG*TYLMSICLLMTFPVLTCYSLTHIKISVFRGRLTS*SPRPADLVRIHASTFYPLVLMCVVMGLMK*LLVHRLS*MWRAS*FVLARRQLIWRLRTIPTSNFLVRYEVPHLMLSPY*NQEIRPLMISTGSTLLQQDIERS**SCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPRQSFPSSGLFGQSENFAPLIIVIVLTASIYVLSVWNSG  1080
                R R+S  SQ  F T  I   GT S  L  V  +G *TYLMS C    F VL C S TH K S F  R  S S +   L  I A+ F P VL   V    K L    L  M +  *+ LARRQ I  LRT   SN+LV+ EV  L    +*NQEI+P  I TG TLL QD  R+**SCS+MPFQQPANWAKT+TPLT+GLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGP+QSFPSSG+FGQSENF PL++VI L A I+VLSVWNSG
Subject   6707  RMRIS*LSQQVFQTALISQEGTLSLILQGVQCRGK*TYLMSTCPSKIFQVLMCCSRTHTKTSAFLKRHISSSQKLVGLA*ILANIFPPSVLRLAVTVWTKSLWGRLLHWMLKGC*YALARRQWISPLRTTLNSNYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQQPANWAKTITPLTVGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSG  7543

Range 7: 6074 to 6424 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
130.7 bits(279) 0.0 62/117(53%) 0/117(0%) Minus/Plus
Query     1363  KPVPFCSTQWQICCLPS*GTN*QGPSQLRLRAMICAQTAD*GLKLSMKVS*I*FALRLKYNSSQTLHFVDGVCSKKGSLRNLN*FGREFALLVKWVTWKIALIIMQLRCPMPTGWVS  1713
                KP  FC T W  CC P *GTN*Q  SQ  L+ M C      GLK SM+V * *FALR +++     H  DGV  +KGS R+LN* G  +ALL +WVTW+I L IM+ R PM TGW S
Subject   6074  KPAHFCLTLWLTCCSPF*GTN*QALSQ*HLQVMTCVLIEGCGLKQSMRVF*T*FALRPRFSLFPIPHSADGVYLRKGSSRSLN*SGSGYALLGRWVTWRIVLTIMR*RSPMRTGWES  6424

Range 8: 7589 to 7744 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.0 bits(142) 0.0 34/52(65%) 0/52(0%) Minus/Plus
Query       43  QQ*W***GLSHKGYRGVNIN*KLWPK*GTCFNS*GSVRRFEGFRG*PYW*RN  198
                QQ*W    L H G+  VN N*KL PK*G C +  G VRRFEGFRG*PY *RN
Subject   7589  QQ*WQSPRLLH*GHWRVNFN*KLRPK*GPCIHCEGGVRRFEGFRG*PYC*RN  7744

Range 9: 6438 to 6635 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.6 bits(128) 0.0 36/66(55%) 0/66(0%) Minus/Plus
Query     1152  DE*RRS*SALQLCAVPG*K*AQDEMLNFWIV*SYRLGLKCLAWCDYYE*LS*SFVYV*VCGCL*CA  1349
                D+  RS   L LC + G + A DEMLNF  +*S  LGLK LA  +YYE* S*S V +*VC C  CA
Subject   6438  DDRGRSGGPL*LC*ILGQEQA*DEMLNFRPI*SD*LGLKYLALFEYYE*FS*SIVNI*VCRCFQCA  6635

Range 10: 6272 to 6979 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
200.4 bits(431) 0.0 123/236(52%) 0/236(0%) Plus/Minus
Query      808  *NQRIEGTCMYSHQICRSWTL*SEPPSEH*YFDMGQRIARQNRKCHQQTDTHQVCLSSLLQHNQESMA*CTSQKDWECXXXXXXXXXNSRPQ**ALLSNYFYRYQEHYERQLEI*AHYRHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQLLLHSSFQLTTHPTCRHRTPQLHNYQCNFPGYPFHEQCKFSPKSIEVS*RSLL*TNTIHKM  1515
                *N+R +  C YS Q  +  T *+ P  E * F MG R A QN K   +T THQVC  S   H  E+ A*CT   D  C E  L*+L*NS P+  A L NYFY YQ HYE  LEI*AH +H QTQ  T L*L+YS* S++AK+LRPN  LQ   KLSISS A  *P   H+ +   LL  SSFQ    P   HR P  HN Q N PGYP   QC  +P+ IE S*RSL * NTI +M
Subject   6272  *NRRRKDICKYSRQTYKFLT**NVPL*EC*CFGMGPRTAHQNLKNLGRTSTHQVCSLSPALHTLENKA*CTFL*D*GCLEHLL*KL*NSHPRKLAPLLNYFYHYQAHYE*LLEI*AH*KHLQTQMLTML*LNYS*YSNNAKYLRPNQSLQIGLKLSISSYACS*PRI*HNYNGPPLLPRSSFQWIALPAGTHRRPLSHNCQYNSPGYPSP*QCISAPRLIEAS*RSLP*INTIRRM  6979

Range 11: 7034 to 7477 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
142.7 bits(305) 0.0 80/148(54%) 0/148(0%) Plus/Minus
Query      310  KILRLTKKPRARERLSGTTICYAFGAVPITSSMWKLMYVVP*VWQI*LS*EMQHQANAQAYRQRSDSFGPICRLLKRHFTA*LSTSFYVLLQQCRTSAYHQRSDLLISIR*QHQMWHLVPHKEV*SRNRAQPPNQLPPCQNKLGRPPH  753
                KILRL + PRARE L  TT+ Y F  VP+T ++ KLM VVP*+  I*L  EMQH+ NAQA  Q S  F PI RLLKRH TA*LS S  VL QQC+TSAY    DLLIS   +    +L  HK +* ++ AQ  + LPPCQ+ L    H
Subject   7034  KILRLAEYPRAREGLLWTTVSYTFCTVPVTPTVRKLMDVVP*IR*I*LPQEMQHKPNAQANCQWSYGFCPIRRLLKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKELRR*KLNL*LHKVI*IQSCAQRRDPLPPCQSILAPLQH  7477

Range 12: 7532 to 7726 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.4 bits(215) 0.0 52/65(80%) 0/65(0%) Plus/Minus
Query       61  LTPKAFKPPNTSLTVEASASLGPQFSINIDSPVALMRQXXXXXXXXXTCARIRVAITAPTRTRIP  255
                LTPKAFKPPNTS TV+A ASLGPQFSI IDSPVALM+QP   PLLLST ARI +AIT PT+TRIP
Subject   7532  LTPKAFKPPNTSFTVDARASLGPQFSIKIDSPVALMKQPW*LPLLLST*ARIWMAITIPTKTRIP  7726

Range 13: 6161 to 6244 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.4 bits(49) 0.0 15/28(54%) 0/28(0%) Plus/Minus
Query     1543  P*GKSYSGNLHAQF*ALICCLRTYHRPQ  1626
                P*GKS S N HA F*A      T H  Q
Subject   6161  P*GKSCSENPHALF*AATFD*HTCHHLQ  6244

Range 14: 7515 to 7778 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
157.8 bits(338) 0.0 72/88(82%) 0/88(0%) Minus/Plus
Query        9  YMYYLFGILVLVGAVIATLILAHVDSNNGDSKGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDCHC*HC*MAS  272
                YMY LFGILVLVG VIA  ILAHVDS++G+ +GC IRATGESILIENCGPSEALASTVKEVLGGLKALGVS   EEID HC*  *MAS
Subject   7515  YMYCLFGILVLVGIVIAIQILAHVDSSSGNHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVSRTVEEIDYHC*IG*MAS  7778

Range 15: 6039 to 6389 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
116.1 bits(247) 0.0 58/117(50%) 0/117(0%) Minus/Plus
Query     1398  AWVFCHNEIYG*SQYLFVQHNGKYVVYLLKVRTDRVRVNCVCGR*YVRKQQIKA*N*A*RFPEYDLP*G*STIRHKPYILWMVFVQRRDL*ETSIDLGENLHCS*NG*PGKLH**LC  1748
                A +  +NE+Y  SQ++FV H G +VV+L +VRTDR+ VN +C  *+V   ++ A*N A* F E+DLP*G  ++  + +IL MVF+  RDL E SI+LG ++HC  +G*PG+L+* LC
Subject   6039  ARIILYNEVYRGSQHIFV*HYG*HVVHLSEVRTDRL*VNSICR**HVC*SKVAA*NRA*GFSEHDLP*GQGSVCFQSHILRMVFI*GRDLQEASINLGADMHC*GDG*PGELY*QLC  6389

Range 16: 7050 to 7277 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
87.7 bits(185) 0.0 42/76(55%) 0/76(0%) Minus/Plus
Query      510  NLFWQGGS*FGGCARFRLQTSL*GTRCHI*CCHLIEIKRSDL***ALVLHCCNKT*KEVDNHAVKCLFSNLQIGPK  737
                N+ WQGGS    CA+  +Q +L*  R + *  +  EIKRS+   *ALVLHCC KT  E+DNHAV+CLFS+L+IG K
Subject   7050  NMLWQGGSGSRRCAQL*IQITL*S*RFNF*RRNSFEIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFSSLRIGQK  7277

Range 17: 6765 to 6980 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
65.7 bits(137) 0.0 34/72(47%) 0/72(0%) Minus/Plus
Query      807  EVHQAILSWLCCKREDKHT**VSVC**HFRF*RAIL*PISKYQCSEGGSLHKVQDLQIW*EYMQVPSILWF*  1022
                +VH A+ S +C   E +HT**V V    FRF* A+L PI K+Q S  G+ H+V++L +W EY+Q+  +L F*
Subject   6765  KVH*ALFSRVCSAGESEHT**VLVRPRFFRF*CAVLGPIPKHQHS*RGTFHQVKNL*VWREYLQISFLLRF*  6980

Range 18: 7323 to 7457 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.0 bits(81) 0.0 24/45(53%) 0/45(0%) Minus/Plus
Query      330  IS*ESQICHTQGTTYINFHMEDVIGTAPKA*HIVVPDSLSRALGF  464
                IS* SQI   QGTT INF    V GT  K *  VV  + S ALG+
Subject   7323  IS*GSQIYLIQGTTSINFLTVGVTGTVQKV*LTVVQSNPSLALGY  7457

Range 19: 6473 to 6571 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.2 bits(77) 0.0 20/33(61%) 0/33(0%) Minus/Plus
Query     1216  VCGSWLEISTR*DAQFLDCLKL*IRP*VFGMV*  1314
                V  SW   S R*DAQF   LK  IRP*VFG++*
Subject   6473  VLDSWSGTSIR*DAQFQAYLKRLIRP*VFGII*  6571

Grapevine rupestris stem pitting associated virus isolate GRSPaV GG, complete genome

Sequence ID: JQ922417.1 Length: 8758 Number of Matches: 18

Range 1: 6040 to 7713 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1060.9 bits(2309) 0.0 441/558(79%) 0/558(0%) Minus/Plus
Query       74  LGSFAIMRFTGEASTFLFNTMANMLFTFLRYELTGSESIAFAGDDMCANSRLRLKTEHEGFLNMICLKAKVQFVTNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFTAFTAGVPDTPNLSGRYIKPYSPGCAVKGRINILDEYLSVDDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNVRSDGLDEVITGSPFELDVEGVLICFGKEAVDLAVAHDSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCKLGQNCHSVDDRLGHWLGAAFPKKVKFAILRGQHTSISTWRTL*GRHQKHNILWSQTVFPELWAFWSV*EFCTFNNCDSINGLHICTICLEFWFL*AL*LQP*SLHMSTAIMVIVRVVS*GLQGSQY*LKIVAQVRHLLQQLRKC*EV*R  1747
                LGSF+IMRFTGEASTFLFNTMANMLFTFLRYELTGSESIAFAGDDMCAN RLRLKTEHEGFLNMICLKAKVQFV+NPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMM EEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALS+WH + IMNNLVKALS FEFVGV+SVL+FPVV+HSVPGSGKSSLIRELI+EDE+F AFTAGVPD+PNL+GRYIKPYSPGCAV G++NILDEYLSV D SGFDVLFSDPYQNI +P+EAHFIKSKTCRFG NTCKYL SFGF V SDGLD+VI GSPF LDVEGVLICFGKEAVDLAVAH+S+FKLPCEVRG+TF+VVTLLKSRDPT +D+HWFYIAATRHR+KLIIMQ*+AFSA C+LG+N +S+D  LGHW  AAF ++VK  + RGQH SI     L GR++K+N+LWS+ + P+LW F  +*EFC  N C   N +H C +CLEFW  * L*L   SL M TA++ I +V S G   SQ+*LK  AQVR L    R+C EV*R
Subject   6040  LGSFSIMRFTGEASTFLFNTMANMLFTFLRYELTGSESIAFAGDDMCANRRLRLKTEHEGFLNMICLKAKVQFVSNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHYLSIMNNLVKALSAFEFVGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQNIGIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDKVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWLGHWTCAAFSEEVKSTLFRGQHPSIPPRWALQGRYKKYNLLWSKAILPQLWDFRPI*EFCALNACHRFNRIHTCIVCLEFWSW*EL*LPSKSLLM*TAVVAITKVASLGPLESQF*LKTAAQVRPLRPL*RRCWEV*R  7713

Range 2: 6684 to 7772 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
485.9 bits(1054) 0.0 227/363(63%) 0/363(0%) Plus/Minus
Query       15  HLTMLTMTINFFTNMANP*SLQTS*HFLNC*SKCLTWATIFN*Y*LPCSPYETTLTITIIAVDMCKD*GCNYSAYKNQNSKQIVHIWRPLILSQLLKVQNSQTDQKAQSSGKTVWDHNMLCFWCRPYNVLHVEIDVCCPLSMANLTFLGNAAPSQCPSLSSTE*QFWPNLQVAEKAFHCMIINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSESCATAKSTASLPKQIRTPSTSNSNGEPVITSSSPSLRTLKPKDRRYLHVFSPNLQVLDFMK*ASLGTLIF*YGSENSTSKPEMSSTDRYSSSMFILPFTAQPGEYGLMYLPERLGVSGTPAVKAVKLSSSVMSSLIK  1103
                H   LTM INFF + ANP*SLQTS H L+   K LTWA +FN  *L   P E TL I   AV M KD   NY++Y++QNSKQ +H+   L L Q L+ QNSQ  +K+QS G+   DH+ L F  RP N     ID CCPL+  +LT   NAA  QCPS  S E  F PN Q AEKA +CMIINF LCLVAAM*NQCLSS VGSLDF +VTT  V P TSQG+L SE CATA+STASLPK I TPSTS+  G+P +T S PSL TLKPK+ RYL VF+PNLQV D MK ASLG  +F YGSENSTSKPE S TD+YSSS+F  P TA PGE GLMYLP RLG+SGTPAVKA+K SSS +SSLIK
Subject   6684  HSANLTMIINFFNSTANP*SLQTSQHLLHSGRKGLTWAAVFNQN*LSSGPNEATLVIATTAVYMSKDLDGNYNSYQDQNSKQTIHV*MRLNL*QALRAQNSQIGRKSQSWGRIALDHSKLYFLYRPCNAHRGGIDGCCPLNKVDLTSSENAAQVQCPSQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSELCATARSTASLPKHINTPSTSSVKGDPTMTLSKPSLLTLKPKEERYLQVFTPNLQVFDLMKCASLGMPMFWYGSENSTSKPEKSWTDKYSSSIFTFPGTAHPGE*GLMYLPVRLGLSGTPAVKAIKFSSSEISSLIK  7772

Range 3: 6039 to 6602 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
327.8 bits(709) 0.0 150/188(80%) 0/188(0%) Plus/Minus
Query     1185  DKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSMQFSRLPISRAMQILSQIN*GFLKIPSLNKHHPQNVGFVTNCTLALRQIIFRKPSCSVLSLNLLFAHISSPANAIDSDPVSSYLKKVNNIFAIVLNKKVLASPVNLIMAKDPS  1748
                D ALTKLFII+  CQ LKA*SIASN PEIEHLILCLFLT+N TQL* ASTSSS IIS+D+SP+  A*+TSIA*LS+QFS+LPIS AM I SQIN*GFLKIPSLNKHHPQNVG  TN TLALRQI+FRKPSCSVLS NL  AH+SSPANAIDS+PVSSYL+KVNN+ AIVLN+ VLASPVNLI+  DPS
Subject   6039  DNALTKLFIILK*CQILKA*SIASNRPEIEHLILCLFLTKNLTQL*WASTSSSVIISMDSSPSRYA*ETSIA*LSIQFSKLPISLAMHIRSQIN*GFLKIPSLNKHHPQNVGLETN*TLALRQIMFRKPSCSVLSRNLRLAHMSSPANAIDSEPVSSYLRKVNNMLAIVLNRNVLASPVNLIIENDPS  6602

Range 4: 6463 to 7773 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
527.5 bits(1145) 0.0 250/437(57%) 0/437(0%) Plus/Minus
Query       14  PSNNVNNDNQFLHQYG*PLKPSNLLTLP*LLKQVPHLGHNFQLILTPL*PL*DNPYYHHYCCRHVXXXXXXXXXXXEPEFQTDSTYMEAVNTITIIKGAKFSD*PKSPELGKDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDYQLLSMSCCSNVEPVLIIRGRIS*FQ*GDNIKCGTSYLTRKFEVGIVRNRQINCLLAKTN*DALHI*LKR*TSNHFIKPITTHIKTKG*KVLACILTKSAGLGLYEVSLPRNTDILIWVRE*HVKTGNVINRQILIKYVYPPFYSTTRRVWLDVPPRKIGSVGNSGCEGCETLVLSDELSYQTTFTATRNTMNDNWKSEHTIDTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQSRN*ASHLVLISNQEPHTVVV  1324
                P +  NNDNQFL Q+G*PLKPSNL T P    Q PHLG +FQ  LT   P * N    HYCC H QG G QLQ L  PEFQTD+T M A+  +T IKG KFSD PK PELGKDC GPQ V+L VPSL*RPP GN* MLSPE G+FDFLRKCST PMPKP VNGV V AQFAGC*KGI LHDYQ L +SC SNV+PV I+ G IS*FQ   ++K  TS  TR FE  +VRN +I+CLL K  *   +I* KR   N F++ +T ++KT+G K+ A I  K     L E+ L RN D+L+WVRE H+KT  +++ Q+LIKY++ P++ T  R+ L+VP  +I +V N+ CE  + L+L + L Y TTFT TR+TMND WK +HT +T+KLK  Q FN*+IHN   MPNT*GLI  FK + N*ASHL+L+ +QE +T+++
Subject   6463  PFSQFNNDNQFLQQHG*PLKPSNLPTPPSQWTQGPHLGRSFQSKLTLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAIKPMTSIKGTKFSDWPKIPELGKDCFGPQ*VILFVPSL*RPPWGN*WMLSPE*GRFDFLRKCSTSPMPKPTVNGVMVFAQFAGC*KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVVRNSEIHCLLTKAY*HPFNI*CKRRPHNDFVQAVTANLKTEGGKIFASIHAKPTSF*LDEMCLFRNADVLVWVREQHIKT*KILDGQVLIKYIHFPWHCTPWRIRLNVPSCEIRAVWNTCCESYKILILGN*LPY*TTFTTTRHTMNDYWKFKHTENTYKLKC*QCFN*IIHNTQIMPNT*GLINRFK*A*N*ASHLMLVPDQESNTIIM  7773

Range 5: 6055 to 6423 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
148.2 bits(317) 0.0 64/123(52%) 0/123(0%) Plus/Minus
Query     1364  LTQPVGIGHLNCIIINAIFQVTHFTSNANSLPNQLRFLKDPFFEQTPSTKCRVCDELYFSLKANHIQETFMLSFKP*SAVCAHIIARKRN*LGPCQFVP*EGKQHICHCVEQKGTGFTRKSHY  1732
                L+QPV IG L  II+N I QVTH  SNA  LP+ LR L+DPF + TPS +C + ++L   LKA+H+Q+T ML FKP  ++  H+I  K  *L  CQFVP +G+QH+ H V+QK  GF  K HY
Subject   6055  LSQPVCIGDLYRIIVNTILQVTHLPSNAYPLPD*LRLLEDPFLK*TPSAECGIGNKLNLGLKADHVQKTLMLCFKPQPSISTHVITCKCY*LRACQFVPQKGEQHVSHSVKQKCAGFPSKPHY  6423

Range 6: 6707 to 7543 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
345.6 bits(748) 0.0 170/279(61%) 0/279(0%) Minus/Plus
Query      244  RTRVSQPSQPEFPTLPIFLGGTSSHTLLVVL*KGG*TYLMSICLLMTFPVLTCYSLTHIKISVFRGRLTS*SPRPADLVRIHASTFYPLVLMCVVMGLMK*LLVHRLS*MWRAS*FVLARRQLIWRLRTIPTSNFLVRYEVPHLMLSPY*NQEIRPLMISTGSTLLQQDIERS**SCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPRQSFPSSGLFGQSENFAPLIIVIVLTASIYVLSVWNSG  1080
                R R+   SQ  F T  I   GT S  L  V  +G * YLMS C    F VL C S TH K S F  R  S S +   L  I A+ F P VL   V    K L    L *M +  *+ L RRQ I  LRT   SN+LV+ EV  L    +*NQEI+P  I TG TLL QD  R+**SCS+MPFQQPANWAKT+TPLT+GLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGP+QSFPSSG+FGQSENF PL++VI L A I+VLSVWNSG
Subject   6707  RMRIL*LSQQVFQTALISQEGTLSLILQGVQCQGK*IYLMSTCPSKIFQVLMCCSRTHTKTSAFLKRHISSSQKLVGLA*ILANIFPPSVLRLAVTAWTKSLWGRLLH*MLKGC*YALVRRQWISLLRTTLNSNYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQQPANWAKTITPLTVGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSG  7543

Range 7: 6074 to 6424 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
127.1 bits(271) 0.0 61/117(52%) 0/117(0%) Minus/Plus
Query     1363  KPVPFCSTQWQICCLPS*GTN*QGPSQLRLRAMICAQTAD*GLKLSMKVS*I*FALRLKYNSSQTLHFVDGVCSKKGSLRNLN*FGREFALLVKWVTWKIALIIMQLRCPMPTGWVS  1713
                KP  FC T W  CC P *GTN*Q  SQ  L+ M C      GLK SM+V * * ALR +++     H  DGV  +KGS R+LN* G  +ALL +WVTW+I L IM+ R PM TGW S
Subject   6074  KPAHFCLTLWLTCCSPF*GTN*QALSQ*HLQVMTCVLIEGCGLKQSMRVF*T*SALRPRFSLFPIPHSADGVYLRKGSSRSLN*SGSGYALLGRWVTWRIVLTIMR*RSPMHTGWES  6424

Range 8: 6438 to 6635 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.6 bits(128) 0.0 36/66(55%) 0/66(0%) Minus/Plus
Query     1152  DE*RRS*SALQLCAVPG*K*AQDEMLNFWIV*SYRLGLKCLAWCDYYE*LS*SFVYV*VCGCL*CA  1349
                D+  RS   L LC + G + A DEMLNF  +*S  LGLK LA  +YYE* S*S V +*VC C  CA
Subject   6438  DDRGRSGGPL*LC*ILGQEQA*DEMLNFRPI*SD*LGLKYLALFEYYE*FS*SIVSI*VCRCFQCA  6635

Range 9: 7589 to 7744 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.9 bits(120) 0.0 31/52(60%) 0/52(0%) Minus/Plus
Query       43  QQ*W***GLSHKGYRGVNIN*KLWPK*GTCFNS*GSVRRFEGFRG*PYW*RN  198
                QQ*W    L H G+  VN +*KL PK*G C +  G V RFEGFRG*P  *RN
Subject   7589  QQ*WQSPRLLH*GHWRVNFD*KLRPK*GPCVHCEGGVGRFEGFRG*PCC*RN  7744

Range 10: 6272 to 7477 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
319.1 bits(690) 0.0 200/402(50%) 0/402(0%) Plus/Minus
Query      310  KILRLTKKPRARERLSGTTICYAFGAVPITSSMWKLMYVVP*VWQI*LS*EMQHQANAQAYRQRSDSFGPICRLLKRHFTA*LSTSFYVLLQQCRTSAYHQRSDLLISIR*QHQMWHLVPHKEV*SRNRAQPPNQLPPCQNKLGRPPHLTQTVNQ*SLHQAHHYAH*NQRIEGTCMYSHQICRSWTL*SEPPSEH*YFDMGQRIARQNRKCHQQTDTHQVCLSSLLQHNQESMA*CTSQKDWECXXXXXXXXXNSRPQ**ALLSNYFYRYQEHYERQLEI*AHYRHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQLLLHSSFQLTTHPTCRHRTPQLHNYQCNFPGYPFHEQCKFSPKSIEVS*RSLL*TNTIHKM  1515
                KILRL + PRA E L  TT+ Y F  VP+T ++ +LM VVP*+  I*L  +MQH++NAQA  Q S  F PI RLLKRH TA*LS S  VL QQC+TSAY    DLLIS   +    +L  HK +* ++ AQ  + LPP Q+ L    HL        L  + H   *N+R +  C YS Q  +  T *+ P  E   F MG R A QN K   +T THQV   SL  H  E+ A*CT   D  C E  L*+L*NS P+  A L NYFY YQ HYE  LEI*AH +H QTQ  T L*L+YS* S++AK+LRPN  LQ   KLSISS A  *P   H+ +   LL  SSFQ    P   HR P  HN Q N P YP   QC  +P+ IE S*RSL * NTI +M
Subject   6272  KILRLAENPRAGEGLLWTTVSYTFCTVPVTPTVGELMDVVP*IR*I*LPQKMQHKSNAQANCQWSYGFCPIRRLLKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKELRR*KLNL*LHKVI*IQSCAQQRDPLPPYQSILTPLQHLV*KATPQ*LCPSRHC*P*NRRRKDICKYSRQTYKFLT**NVPL*ECRCFGMGPRTAHQNLKNLGRTSTHQVYSLSLALHTLENKA*CTFL*D*GCLEHLL*KL*NSHPRKLAPLLNYFYHYQAHYE*LLEI*AH*KHLQTQMLTML*LNYS*YSNNAKYLRPNQSLQIGLKLSISSYACS*PRI*HNYNGPPLLPRSSFQWIALPAGMHRRPLSHNCQYNSPSYPSP*QCISAPRLIEAS*RSLP*INTIRRM  7477

Range 11: 7532 to 7726 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.4 bits(215) 0.0 52/65(80%) 0/65(0%) Plus/Minus
Query       61  LTPKAFKPPNTSLTVEASASLGPQFSINIDSPVALMRQXXXXXXXXXTCARIRVAITAPTRTRIP  255
                LTPKAFKPPNTS TV+A ASLGPQFSI IDSPVALM+QP   PLLLST ARI +AIT PT+TRIP
Subject   7532  LTPKAFKPPNTSFTVDARASLGPQFSIKIDSPVALMKQPW*LPLLLST*ARIWMAITIPTKTRIP  7726

Range 12: 6161 to 6244 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.0 bits(46) 0.0 14/28(50%) 0/28(0%) Plus/Minus
Query     1543  P*GKSYSGNLHAQF*ALICCLRTYHRPQ  1626
                P*G+S S N HA F*A      T H  Q
Subject   6161  P*GRSCSENPHALF*AATFD*HTCHHLQ  6244

Range 13: 7515 to 7778 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
157.8 bits(338) 0.0 72/88(82%) 0/88(0%) Minus/Plus
Query        9  YMYYLFGILVLVGAVIATLILAHVDSNNGDSKGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDCHC*HC*MAS  272
                YMY LFGILVLVG VIA  ILAHVDS++G+ +GC IRATGESILIENCGPSEALASTVKEVLGGLKALGVS   EEID HC*  *MAS
Subject   7515  YMYCLFGILVLVGIVIAIQILAHVDSSSGNHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVSRAVEEIDYHC*IG*MAS  7778

Range 14: 6039 to 6389 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
107.8 bits(229) 0.0 56/117(48%) 0/117(0%) Minus/Plus
Query     1398  AWVFCHNEIYG*SQYLFVQHNGKYVVYLLKVRTDRVRVNCVCGR*YVRKQQIKA*N*A*RFPEYDLP*G*STIRHKPYILWMVFVQRRDL*ETSIDLGENLHCS*NG*PGKLH**LC  1748
                A +  +NE+Y  SQ++ V H G +VV+L +VRTDR+ VN +C  *+V   ++ A*N A* F E+DLP*G  ++  + +IL MVF+  RDL E SI+LG ++HC  +G* G+L+* LC
Subject   6039  ARIILYNEVYWGSQHISV*HYG*HVVHLSEVRTDRL*VNSICR**HVC*SKVAA*NRA*GFSEHDLP*GQGSVCFQSHILRMVFI*GRDLQEASINLGADMHC*GDG*LGELY*QLC  6389

Range 15: 7032 to 7277 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.9 bits(179) 0.0 43/82(52%) 0/82(0%) Minus/Plus
Query      510  RCGGRPNLFWQGGS*FGGCARFRLQTSL*GTRCHI*CCHLIEIKRSDL***ALVLHCCNKT*KEVDNHAVKCLFSNLQIGPK  755
                RC    N+ W GGS    CA+  +Q +L*  R + *  +  EIKRS+   *ALVLHCC KT  E+DNHAV+CLFS+L+IG K
Subject   7032  RC*RGVNMLW*GGSGSRCCAQL*IQITL*S*RFNF*RRNSFEIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFSSLRIGQK  7277

Range 16: 6765 to 6980 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
64.3 bits(134) 0.0 33/72(46%) 0/72(0%) Minus/Plus
Query      807  EVHQAILSWLCCKREDKHT**VSVC**HFRF*RAIL*PISKYQCSEGGSLHKVQDLQIW*EYMQVPSILWF*  1022
                +VH A+ S +C  RE ++T**V V    FRF* A+L PI K++ S  G+ H+V++L +W EY+Q+  +L F*
Subject   6765  KVH*ALFSRVCSARESEYT**VLVRPRFFRF*CAVLGPIPKHRHS*RGTFHQVKNL*VWREYLQISFLLRF*  6980

Range 17: 6473 to 6571 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.2 bits(77) 0.0 20/33(61%) 0/33(0%) Minus/Plus
Query     1216  VCGSWLEISTR*DAQFLDCLKL*IRP*VFGMV*  1314
                V  SW   S R*DAQF   LK  IRP*VFG++*
Subject   6473  VLDSWSGTSIR*DAQFQAYLKRLIRP*VFGII*  6571

Range 18: 7323 to 7457 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.4 bits(71) 0.0 23/45(51%) 0/45(0%) Minus/Plus
Query      330  IS*ESQICHTQGTTYINFHMEDVIGTAPKA*HIVVPDSLSRALGF  464
                I * SQI   QGTT IN     V GT  K *  VV  + S ALGF
Subject   7323  IF*GSQIYLIQGTTSINSPTVGVTGTVQKV*LTVVQSNPSPALGF  7457

Nucleotide Sequence (783 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 33 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
79
158
237
316
395
474
553
632
711
783

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 10

Range 1: 3871 to 4650 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
605.9 bits(1316) 0.0 255/260(98%) 0/260(0%) Minus/Plus
Query        4  KIGNGPQSIKVDELRKVKRSALDLLSLNGSKTTYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDEECKVAKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRRDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFINPMFDSRLPCNFKKGSMTAAFAD  783
                KIGNGPQSIKVDELRKVKRSALDLLSLNGSK TYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK+DLEMDEECKV KAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIR DAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRF+NPMFDSRLPCNFKKGSMTAAFAD
Subject   3871  KIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFAD  4650

Range 2: 3873 to 4652 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
553.2 bits(1201) 0.0 244/260(94%) 0/260(0%) Plus/Minus
Query        2  *SANAAVMEPFLKLHGNLESNIGFMNLRLSKLYLYDFPSRSLNMSLCSAPKMALSF*ESYVL*QGSPASEMKASRRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFATLHSSSISRSFLIELARARLGETKVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVRPPSKHP*SFSARSKLGKYVVFDPFRESRSRAERLTFRSSSTFIL*GPLPI  781
                *SA AAVMEPFLKL GNLESNIGF NLRLSKLYLYDFPS +LNMSLCSAPK+ALSF*ESYVL*QGSPA EMKAS RITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAF TLHSSSISRS LIE ARARLGET VTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPV+PPSKHP*SFSA SKLGKYV+FDPFRESRSRA+RLTFRSSSTFIL*GPLPI
Subject   3873  *SAKAAVMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSNLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHSSSISRSLLIEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSALSKLGKYVIFDPFRESRSRADRLTFRSSSTFIL*GPLPI  4652

Range 3: 3871 to 4254 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
242.5 bits(523) 0.0 108/128(84%) 0/128(0%) Plus/Minus
Query      400  IHFQVLLD*IG*SPPR*NKSHKFPFRSLHEALV*ETLSSPKCTKYNCQFSLFDVGS*HSSKPRL*IIKFLVTYHTS*TSQQAPLKFFGPLKTWKICCF*PVQGK*VKS*TFNFSQLIHLYTLRPVTNL  783
                IHF V  D*I *SPPR*+K +KF FRSLHEALV*ETLSSPKCTK+NCQFSLFDV S*HSSKPRL*I+KFL+TYH S TSQQAPLKFF PLKTWKIC  *PVQ K VKS*+FNFSQLIHLYTLRPVTNL
Subject   3871  IHF*VPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCTKHNCQFSLFDVRS*HSSKPRL*IVKFLITYHASQTSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPVTNL  4254

Range 4: 4297 to 4653 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
216.9 bits(467) 0.0 96/119(81%) 0/119(0%) Plus/Minus
Query        1  LISKRGSHGTFFEVTW*S*IKHWIYEPPALQVVPI*LSFKKSQYVTLFSTQNGSIFLRIVCALTRITS**DESVTANNKET*INVTRGK*LNFIKDHAMTSL*ACNLSKENFEGNNIPA  357
                +ISK GSHG FFEVT *S*IKHWIY+P ALQVVPI*LSF++ QYVTLF TQN SIFLRI+CALTRITS  DESVTA+NK+T*I+VTR +*LNFIKDHAMTSL*ACN  KE+F+GNNIPA
Subject   4297  VISKSGSHGAFFEVTG*S*IKHWIYKPSALQVVPI*LSFEQPQYVTLFGTQNSSIFLRIICALTRITSKRDESVTADNKKT*IDVTRRE*LNFIKDHAMTSL*ACNFPKEDFKGNNIPA  4653

Range 5: 3873 to 4238 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
241.2 bits(520) 0.0 103/122(84%) 0/122(0%) Minus/Plus
Query      416  DW*RASKYKGG*AAKS*TFSS*PTFPERVKNNIFSKF*AGRKTSGVLAGRSNWCDK*REI**FKALACWSVNFRHQTKRIDSCTWYIWGWKEFPIQELHEEI*REICDFCFT*AGSSQFNQE  781
                DW*RASKYKGG*AAKS*T SS*P F ERVK+NIFSKF* G KTSGVLAGR +W DK* EI* FKALACWSVNF HQTKRIDSC WYIWGWKEFPIQELHEEI*R+IC+ C T*AGSS+FNQ+
Subject   3873  DW*RASKYKGG*AAKS*TISS*PAFSERVKDNIFSKF*EGGKTSGVLAGRFDWRDK**EI*RFKALACWSVNF*HQTKRIDSCAWYIWGWKEFPIQELHEEI*RKICNICLT*AGSSKFNQK  4238

Range 6: 4305 to 4649 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
204.5 bits(440) 0.0 91/115(79%) 0/115(0%) Minus/Plus
Query        5  CCYLRSFP*KGYRPKGWSLRDL**SSAISPWLH*SMSPCYSP*RFHLTSW*SLSKHIRFSKR*SHFGC*TK*HIETS*RKVI*VQLGEPEVHKSNV*FKITM*LQKRFHDCRVC*  349
                CCYL S P*+ YRPKGWSLRDL**SSAI  WLH SMS CY  *RFHL+ W*SLSKHI FSKR*S+FGC T+*HIE + RKVI*VQLGEP+V KSNV*FKIT+*LQKR HDCR C*
Subject   4305  CCYL*SLP*ESYRPKGWSLRDL**SSAIPSWLHRSMSSCYPQ*RFHLSCW*SLSKHI*FSKR*SYFGCRTE*HIEVARRKVI*VQLGEPKVCKSNV*FKITL*LQKRLHDCRFC*  4649

Range 7: 4226 to 4651 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
204.1 bits(439) 0.0 114/142(80%) 0/142(0%) Minus/Plus
Query        3  IQSRRTWKWMKSXXXXXXXXXXXRAGMLLPSKFSLERLQA*RLVIA*SLMKFSYFPLVTLIYVSLLFAVTLSSH*LVILVKAHTILKKIEPFWVLNKVTY*DFLKESHIGTTWRAGGS*IQCLIQDYHVTSKKVP*LPRLLI  428
                IQS+ T KWMKSVRW RQ NQRRRAGMLLP K SL +LQA*RLVIA*SLMKFSY  LVT IYV LL AVTLSS  LVILVKAH ILKKIE FWV N+VTY*   KESHIGTTWRA G *IQCLIQDY VTSKK P*LP LLI
Subject   4226  IQSKGT*KWMKSVRW*RQANQRRRAGMLLPLKSSLGKLQA*RLVIA*SLMKFSYSLLVTSIYVFLLSAVTLSSLLLVILVKAHMILKKIELFWVPNRVTY*GCSKESHIGTTWRAEGL*IQCLIQDYPVTSKKAP*LPLLLI  4651

Range 8: 3872 to 4177 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.0 bits(417) 0.0 90/102(88%) 0/102(0%) Minus/Plus
Query      477  RLVTGLKV*RWMSCEKLNVQLLTYFP*TGQKQHIFQVLSGPKNFRGACWEV*LV**VTRNLMIQSLGLLECQLPTSNKEN*QLYLVHLGLERVSYTRAS*RD  782
                RLVTGLKV*RWMSCEKLN QLLT F *TGQ+ HIFQVL G KNFRGACWEV*L **V RNL IQSLGLLECQL TSNKEN*QL LVHLGLERVSYTRAS*RD
Subject   3872  RLVTGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLRGRKNFRGACWEV*LA**VMRNLTIQSLGLLECQLLTSNKEN*QLCLVHLGLERVSYTRAS*RD  4177

Range 9: 4307 to 4651 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
205.0 bits(441) 0.0 90/115(78%) 0/115(0%) Plus/Minus
Query        3  DQQTRQSWNLF*SYMVILNQTLDL*TSGSPSCTYMTFLQEVSICHFVQHPKWLYLFENRMCFDKDHQLVR*KRHGE*QGDIDQCNQGEIAELHQRSRNDQPLGL*PF*GKLRR*Q  347
                +QQ RQSW+LF*SY VILNQTLDL T GSPSCTYMTFL+  SICH V+HPK LYLFEN MCFDKDHQ  R*KRH  *Q DID+CNQ  IAELHQRSRNDQPLGL*  *G+L+R*Q
Subject   4307  NQQKRQSWSLF*SYRVILNQTLDLQTFGSPSCTYMTFLRATSICHSVRHPK*LYLFENHMCFDKDHQQER*KRHCG*QEDIDRCNQEGIAELHQRSRNDQPLGL*LS*GRLQR*Q  4651

Range 10: 3872 to 4159 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
188.9 bits(406) 0.0 83/96(86%) 0/96(0%) Plus/Minus
Query      495  CIGNSFQPQMYQVQLSILFV*CRKLTLQQAKALNH*ISRHLSHQLDLPASTPEVFRPAQNLENMLFLTRSGKVGQELNV*LFAAHPPLYFEARYQS  782
                CIGNSFQPQMYQ QLSILFV*C+KLTLQQAKALN *IS HLS Q +LPASTPEVF P+QNLENML LTRS K GQEL V*LFAAHPPLYFEARYQS
Subject   3872  CIGNSFQPQMYQAQLSILFV*CQKLTLQQAKALNR*ISHHLSRQSNLPASTPEVFPPSQNLENMLSLTRSEKAGQELIV*LFAAHPPLYFEARYQS  4159

Grapevine rupestris stem pitting associated virus isolate Tannat Rspav1, complete genome

Sequence ID: KR528585.1 Length: 8595 Number of Matches: 10

Range 1: 3853 to 4632 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
601.3 bits(1306) 0.0 253/260(97%) 0/260(0%) Minus/Plus
Query        4  KIGNGPQSIKVDELRKVKRSALDLLSLNGSKTTYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDEECKVAKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRRDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFINPMFDSRLPCNFKKGSMTAAFAD  783
                KIGNGPQSIKVDELRKVKRSALDLLSLNGSK TYFPSFERAEKLQGCLLGGLTGVISDEKFNDS+PWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK+DLEMDE CKV KAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIR DAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRF+NPMFDSRLPCNFKKGSMTAAFAD
Subject   3853  KIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSRPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEGCKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFAD  4632

Range 2: 3855 to 4634 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
549.1 bits(1192) 0.0 242/260(93%) 0/260(0%) Plus/Minus
Query        2  *SANAAVMEPFLKLHGNLESNIGFMNLRLSKLYLYDFPSRSLNMSLCSAPKMALSF*ESYVL*QGSPASEMKASRRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFATLHSSSISRSFLIELARARLGETKVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVRPPSKHP*SFSARSKLGKYVVFDPFRESRSRAERLTFRSSSTFIL*GPLPI  781
                *SA AAVMEPFLKL G+LESNIGF NLRLSKLYLYDFPS SLNMSLCSAPK+ALSF*ESYVL*QGSPA EMKAS RITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAF TLH SSISRS LIE A+ARLGET VTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQG ESLNFSSLITPVRPPSKHP*SFSARSKLGKYV+FDPF+ESRSRA+RLTFRSSSTFIL*GPLPI
Subject   3855  *SAKAAVMEPFLKLQGSLESNIGFTNLRLSKLYLYDFPSSSLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHPSSISRSLLIEFAKARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGLESLNFSSLITPVRPPSKHP*SFSARSKLGKYVIFDPFKESRSRADRLTFRSSSTFIL*GPLPI  4634

Range 3: 3855 to 4220 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
249.9 bits(539) 0.0 106/122(87%) 0/122(0%) Minus/Plus
Query      416  DW*RASKYKGG*AAKS*TFSS*PTFPERVKNNIFSKF*AGRKTSGVLAGRSNWCDK*REI**FKALACWSVNFRHQTKRIDSCTWYIWGWKEFPIQELHEEI*REICDFCFT*AGSSQFNQE  781
                DW* ASKYK G*AAKS*T SS*P F ERVK+NIFSKF*AG KTSGVLAGRSNWCDK REI**FKALACWSVNFRH TKRIDSCTWYIWGWKEFPIQELHEEI*R+IC+ C T*AG S+FNQ+
Subject   3855  DW*WASKYKSG*AAKS*TISS*PAFFERVKDNIFSKF*AGGKTSGVLAGRSNWCDKRREI**FKALACWSVNFRH*TKRIDSCTWYIWGWKEFPIQELHEEI*RKICNICLT*AGFSKFNQK  4220

Range 4: 4208 to 4633 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
217.3 bits(468) 0.0 114/142(80%) 0/142(0%) Minus/Plus
Query        3  IQSRRTWKWMKSXXXXXXXXXXXRAGMLLPSKFSLERLQA*RLVIA*SLMKFSYFPLVTLIYVSLLFAVTLSSH*LVILVKAHTILKKIEPFWVLNKVTY*DFLKESHIGTTWRAGGS*IQCLIQDYHVTSKKVP*LPRLLI  428
                IQS+ TW+WM+ VRW RQ NQRRRAGML P KF L +LQA*RLVIA*SLMKFSY PLVT IYV LLFAVTLSS  LVILVKAH ILKKIE FWVLN+VTY*   K SHIGTTWRAGGS*I+CLIQDY VTSKK P*LP LLI
Subject   4208  IQSKGTWRWMRGVRW*RQANQRRRAGMLSPLKFFLGKLQA*RLVIA*SLMKFSYSPLVTSIYVFLLFAVTLSSLLLVILVKAHMILKKIELFWVLNRVTY*GCSKGSHIGTTWRAGGS*IRCLIQDYPVTSKKAP*LPLLLI  4633

Range 5: 3853 to 4236 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
245.3 bits(529) 0.0 109/128(85%) 0/128(0%) Plus/Minus
Query      400  IHFQVLLD*IG*SPPR*NKSHKFPFRSLHEALV*ETLSSPKCTKYNCQFSLFDVGS*HSSKPRL*IIKFLVTYHTS*TSQQAPLKFFGPLKTWKICCF*PVQGK*VKS*TFNFSQLIHLYTLRPVTNL  783
                IH QV  D*I *SPPR*+K +KF FRSLHEALV*ETLSSPKCTKYNCQFSLF+VGS*HSSKPR *IIKFLV YHTS*TSQQAPLKFF PLKTWKIC  *PVQ K VKS*+FNFSQLIH YTLRP+TNL
Subject   3853  IHLQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCTKYNCQFSLFNVGS*HSSKPRP*IIKFLVAYHTS*TSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHFYTLRPITNL  4236

Range 6: 4279 to 4635 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
219.6 bits(473) 0.0 98/119(82%) 0/119(0%) Plus/Minus
Query        1  LISKRGSHGTFFEVTW*S*IKHWIYEPPALQVVPI*LSFKKSQYVTLFSTQNGSIFLRIVCALTRITS**DESVTANNKET*INVTRGK*LNFIKDHAMTSL*ACNLSKENFEGNNIPA  357
                +ISK GSHG FFEVT *S*IKH IYEPPALQVVPI*L F++ QYVTLFSTQN SIFLRI+CALTRITS  DESVTANNK+T*I+VTRG+*LNFIKDHAMTSL*ACN  K+NF+G+NIPA
Subject   4279  VISKSGSHGAFFEVTG*S*IKHRIYEPPALQVVPI*LPFEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*IDVTRGE*LNFIKDHAMTSL*ACNFPKKNFKGDNIPA  4635

Range 7: 4287 to 4631 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
206.3 bits(444) 0.0 91/115(79%) 0/115(0%) Minus/Plus
Query        5  CCYLRSFP*KGYRPKGWSLRDL**SSAISPWLH*SMSPCYSP*RFHLTSW*SLSKHIRFSKR*SHFGC*TK*HIETS*RKVI*VQLGEPEVHKSNV*FKITM*LQKRFHDCRVC*  349
                CC+L SF *+ YRPKGWSLRDL**SSAI PWLH SMS CYS *RFHL+ W*SLSKHI FSKR*S+FGC*T+*HIE + R+VI*VQLGEPEV KS+V*FK T+*LQKR HDCR C*
Subject   4287  CCHL*SFS*ESYRPKGWSLRDL**SSAIPPWLHRSMSSCYSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEAARREVI*VQLGEPEVRKSDV*FKTTL*LQKRLHDCRFC*  4631

Range 8: 3854 to 4159 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
201.8 bits(434) 0.0 91/102(89%) 0/102(0%) Minus/Plus
Query      477  RLVTGLKV*RWMSCEKLNVQLLTYFP*TGQKQHIFQVLSGPKNFRGACWEV*LV**VTRNLMIQSLGLLECQLPTSNKEN*QLYLVHLGLERVSYTRAS*RD  782
                RLV GLKV*+WMSCEKLN QLLT F *TGQ+ HIFQVLSG KNFRGACWEV*LV** TRNLMIQ LGLLECQLPT NKEN*QLYLVHLGLERVSYTRAS*RD
Subject   3854  RLVMGLKV*KWMSCEKLNDQLLTCFL*TGQR*HIFQVLSGRKNFRGACWEV*LV**ATRNLMIQGLGLLECQLPTLNKEN*QLYLVHLGLERVSYTRAS*RD  4159

Range 9: 4289 to 4633 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
207.3 bits(446) 0.0 91/115(79%) 0/115(0%) Plus/Minus
Query        3  DQQTRQSWNLF*SYMVILNQTLDL*TSGSPSCTYMTFLQEVSICHFVQHPKWLYLFENRMCFDKDHQLVR*KRHGE*QGDIDQCNQGEIAELHQRSRNDQPLGL*PF*GKLRR*Q  347
                +QQ RQSW+LF*SY V+LNQT DL TSGSPSCTYMT L+  SICH VQHPK LYLFEN MCFDKDHQ  R*KRH E*Q DID+CNQG IAELHQRSRNDQPLGL*  * KL+R*Q
Subject   4289  NQQKRQSWSLF*SYRVVLNQTSDLRTSGSPSCTYMTSLRAASICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQGGIAELHQRSRNDQPLGL*LS*EKLQR*Q  4633

Range 10: 3854 to 4141 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
198.1 bits(426) 0.0 88/96(92%) 0/96(0%) Plus/Minus
Query      495  CIGNSFQPQMYQVQLSILFV*CRKLTLQQAKALNH*ISRHLSHQLDLPASTPEVFRPAQNLENMLFLTRSGKVGQELNV*LFAAHPPLYFEARYQS  782
                CIGNSFQPQMYQVQLSILFV*CRKLTLQQAKALNH*ISR LSHQLDLPASTPEVF PAQNLENML LTRS K GQEL V*LFAAHP LYFEA YQS
Subject   3854  CIGNSFQPQMYQVQLSILFV*CRKLTLQQAKALNH*ISRRLSHQLDLPASTPEVFPPAQNLENMLSLTRSKKAGQELIV*LFAAHPLLYFEAHYQS  4141

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 11

Range 1: 3871 to 4650 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
599.0 bits(1301) 0.0 252/260(97%) 0/260(0%) Minus/Plus
Query        4  KIGNGPQSIKVDELRKVKRSALDLLSLNGSKTTYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDEECKVAKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRRDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFINPMFDSRLPCNFKKGSMTAAFAD  783
                KIGNGPQSIKVDELRKVKRSALDLLSLNGSK TYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTS IKQRELTVVLGTFGAGKSFL+KSFMKRSEGKFVTFVSPRRALANSIK+DLEMD+ECKV KAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIR DAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRF+NPMFDSRLPCNFKKGSMTAAFAD
Subject   3871  KIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSGIKQRELTVVLGTFGAGKSFLHKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFAD  4650

Range 2: 3873 to 4652 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
545.0 bits(1183) 0.0 240/260(92%) 0/260(0%) Plus/Minus
Query        2  *SANAAVMEPFLKLHGNLESNIGFMNLRLSKLYLYDFPSRSLNMSLCSAPKMALSF*ESYVL*QGSPASEMKASRRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFATLHSSSISRSFLIELARARLGETKVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVRPPSKHP*SFSARSKLGKYVVFDPFRESRSRAERLTFRSSSTFIL*GPLPI  781
                *SA AAVM+PFLKL GNLESNIGF NLRLSKLYLYDFPS SLNMSLCSAPK+ALSF*ESYVL*QGSPA EMKAS R+TRRHRSM*PGGNS TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAF TLHSSSISRS LIE ARARLGET VTNFPSDLFMKLL RKLFPAPNVPSTTVNSLCLM EVDTPASQGFESLNFSSLITPV+PPSKHP*SFSARSKLGKYV+FDPF+ESRSRA+RLTFRSSSTFIL*GPLPI
Subject   3873  *SAKAAVMDPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSSLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRMTRRHRSM*PGGNSWTSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHSSSISRSLLIEFARARLGETNVTNFPSDLFMKLLCRKLFPAPNVPSTTVNSLCLMPEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSARSKLGKYVIFDPFKESRSRADRLTFRSSSTFIL*GPLPI  4652

Range 3: 3871 to 4254 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
240.3 bits(518) 0.0 106/128(83%) 0/128(0%) Plus/Minus
Query      400  IHFQVLLD*IG*SPPR*NKSHKFPFRSLHEALV*ETLSSPKCTKYNCQFSLFDVGS*HSSKPRL*IIKFLVTYHTS*TSQQAPLKFFGPLKTWKICCF*PVQGK*VKS*TFNFSQLIHLYTLRPVTNL  783
                IHFQV  D*I *SPPR*+K +KF FRSLHEALV*ETLSSPKC K++CQFSLFD  S HSSKPRL*I+KFL+TYH S*TSQQAPLKFF PLKTWKIC  *PVQ K VKS*+FNFSQLIHLYTLRPVTNL
Subject   3871  IHFQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCAKHDCQFSLFDARSRHSSKPRL*IVKFLITYHAS*TSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPVTNL  4254

Range 4: 4297 to 4653 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
215.5 bits(464) 0.0 95/119(80%) 0/119(0%) Plus/Minus
Query        1  LISKRGSHGTFFEVTW*S*IKHWIYEPPALQVVPI*LSFKKSQYVTLFSTQNGSIFLRIVCALTRITS**DESVTANNKET*INVTRGK*LNFIKDHAMTSL*ACNLSKENFEGNNIPA  357
                +ISK GSHG  FEVT *S*IKHWIYEPPALQVVPI*L F++ QYVTLFSTQN SIFLRI+CALTRITS  DESVTAN+K+T*I+VTRG+*L+FIKDHAMTSL*ACN  K++F+GN+IPA
Subject   4297  VISKGGSHGPLFEVTG*S*IKHWIYEPPALQVVPI*LPFEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANDKKT*IDVTRGE*LDFIKDHAMTSL*ACNFPKKDFKGNDIPA  4653

Range 5: 3873 to 4238 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
231.1 bits(498) 0.0 101/122(83%) 0/122(0%) Minus/Plus
Query      416  DW*RASKYKGG*AAKS*TFSS*PTFPERVKNNIFSKF*AGRKTSGVLAGRSNWCDK*REI**FKALACWSVNFRHQTKRIDSCTWYIWGWKEFPIQELHEEI*REICDFCFT*AGSSQFNQE  781
                DW*RASKYKGG*AAKS*T SS*P F ERVK+NIFSKF*AG KTSGVLAGR NW DK* EI* FKALACWSV F HQTKRIDS  W+IWGWKEFP QELHEEI*R+IC+ C T*AGSS+FNQ+
Subject   3873  DW*RASKYKGG*AAKS*TISS*PAFFERVKDNIFSKF*AGGKTSGVLAGRFNWRDK**EI*RFKALACWSVYFWHQTKRIDSRAWHIWGWKEFPTQELHEEI*RKICNICLT*AGSSKFNQK  4238

Range 6: 4305 to 4649 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
197.6 bits(425) 0.0 89/115(77%) 0/115(0%) Minus/Plus
Query        5  CCYLRSFP*KGYRPKGWSLRDL**SSAISPWLH*SMSPCYSP*RFHLTSW*SLSKHIRFSKR*SHFGC*TK*HIETS*RKVI*VQLGEPEVHKSNV*FKITM*LQKRFHDCRVC*  349
                C YL S  *+ YRPKGWSLRDL**S AI PWLH SMS C+S *RFHL+ W*SLSKHI FSKR*S+FGC*T+*HIE + R+VI*VQLGEPEV KSNV*FKIT+*LQK  HDCR+C*
Subject   4305  CRYL*SLS*ESYRPKGWSLRDL**SPAIPPWLHRSMSSCHSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEAARREVI*VQLGEPEVRKSNV*FKITL*LQKGVHDCRLC*  4649

Range 7: 4226 to 4261 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
27.2 bits(53) 0.0 9/12(75%) 0/12(0%) Minus/Plus
Query      393  IQSRRTWKWMKS  428
                IQS+ TWKWM S
Subject   4226  IQSKGTWKWMMS  4261

Range 8: 4307 to 4651 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
200.4 bits(431) 0.0 89/115(77%) 0/115(0%) Plus/Minus
Query        3  DQQTRQSWNLF*SYMVILNQTLDL*TSGSPSCTYMTFLQEVSICHFVQHPKWLYLFENRMCFDKDHQLVR*KRHGE*QGDIDQCNQGEIAELHQRSRNDQPLGL*PF*GKLRR*Q  347
                +QQ RQSW  F*SY VILNQTLDL TSGSPSCTYMT L+  SICH VQHPK LYLFEN MCFDKDHQ  R*KRH E*Q DID+CNQG IA LHQRSRNDQPLGL*  * +L+R*+
Subject   4307  NQQRRQSWTPF*SYRVILNQTLDLRTSGSPSCTYMTSLRAASICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQGGIAGLHQRSRNDQPLGL*LS*ERLQR*R  4651

Range 9: 3872 to 4159 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
183.0 bits(393) 0.0 81/96(84%) 0/96(0%) Plus/Minus
Query      495  CIGNSFQPQMYQVQLSILFV*CRKLTLQQAKALNH*ISRHLSHQLDLPASTPEVFRPAQNLENMLFLTRSGKVGQELNV*LFAAHPPLYFEARYQS  782
                C+GNSFQPQM Q +LSILFV*C+K TLQQAKALN *IS HLS QL+LPASTPEVF PAQNLENML LTRS K GQEL V*LFAAHPPLYFEARYQS
Subject   3872  CVGNSFQPQMCQARLSILFV*CQK*TLQQAKALNR*ISHHLSRQLNLPASTPEVFPPAQNLENMLSLTRSKKAGQELIV*LFAAHPPLYFEARYQS  4159

Range 10: 4298 to 4651 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
190.8 bits(410) 0.0 94/118(80%) 0/118(0%) Minus/Plus
Query        3  AGMLLPSKFSLERLQA*RLVIA*SLMKFSYFPLVTLIYVSLLFAVTLSSH*LVILVKAHTILKKIEPFWVLNKVTY*DFLKESHIGTTWRAGGS*IQCLIQDYHVTSKKVP*LPRLLI  356
                AGM LP K  L +LQA*RLVIA*SLMK SY PLVT IYV L FAVTLSS  LVILVKAH ILKKIE FWVLN+VTY*   K SHIGTTWRAGGS*IQCLIQDY VTSK+ P*LP LLI
Subject   4298  AGMSLPLKSFLGKLQA*RLVIA*SLMKSSYSPLVTSIYVFLSFAVTLSSLLLVILVKAHMILKKIELFWVLNRVTY*GCSKGSHIGTTWRAGGS*IQCLIQDYPVTSKRGP*LPPLLI  4651

Range 11: 3872 to 4177 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
186.2 bits(400) 0.0 87/102(85%) 0/102(0%) Minus/Plus
Query      477  RLVTGLKV*RWMSCEKLNVQLLTYFP*TGQKQHIFQVLSGPKNFRGACWEV*LV**VTRNLMIQSLGLLECQLPTSNKEN*QLYLVHLGLERVSYTRAS*RD  782
                RLVTGLKV*RWMSCEKLN QLLT F *TGQ+ HIFQVLSG KNFRGACWEV*L **V RNL IQSLGLLEC L  SNKEN*Q  L HLGLERVSYTRAS*RD
Subject   3872  RLVTGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLSGRKNFRGACWEV*LA**VMRNLTIQSLGLLECLLLASNKEN*QSCLAHLGLERVSYTRAS*RD  4177

Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome

Sequence ID: KR054734.1 Length: 8753 Number of Matches: 11

Range 1: 3871 to 4650 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
586.7 bits(1274) 0.0 243/260(93%) 0/260(0%) Minus/Plus
Query        4  KIGNGPQSIKVDELRKVKRSALDLLSLNGSKTTYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDEECKVAKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRRDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFINPMFDSRLPCNFKKGSMTAAFAD  783
                KIGNGPQSIKVDELRKVKRSALDLLS+NGSK TYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWL+G+STSDIK RELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK+DLEMD+ CKVAKAGKSKKEGWDVVTFEVFLRK+  LKAGHCVIFDEVQLFPPGYIDLCLL IR DAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYN+ESRRF+NPMF+SRLPC+FKKGSMTAAFAD
Subject   3871  KIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSDIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKIANLKAGHCVIFDEVQLFPPGYIDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFAD  4650

Range 2: 3873 to 4652 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
446.4 bits(968) 0.0 204/260(78%) 0/260(0%) Plus/Minus
Query        2  *SANAAVMEPFLKLHGNLESNIGFMNLRLSKLYLYDFPSRSLNMSLCSAPKMALSF*ESYVL*QGSPASEMKASRRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFATLHSSSISRSFLIELARARLGETKVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVRPPSKHP*SFSARSKLGKYVVFDPFRESRSRAERLTFRSSSTFIL*GPLPI  781
                *SANAAVMEPFLK HG+L+SNIGF NLRLS LYL D PS +LN+SLCSAP +A SF ESYVL*QGSPA EMKAS R+  R RS+*PGGNS*TSSK+TQ PAFR   FLR TSKVTTSQPSFFDLPAFATL  SSIS+S LIE ARA LGETKVTN PSDLF+KLLYRKL PAP VPSTTVNS  L+SEVD P S G ESLNFSSLITPV+PPSKHP SFSA SKLGK V+FDPF E RSRA+R TF SSSTF+L GPLPI
Subject   3873  *SANAAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVL*QGSPAREMKASLRMVNRQRSI*PGGNS*TSSKMTQWPAFRFAIFLRNTSKVTTSQPSFFDLPAFATLQLSSISKSLLIEFARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLISEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTFLSSSTFMLCGPLPI  4652

Range 3: 3871 to 4254 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
151.8 bits(325) 0.0 71/128(55%) 0/128(0%) Plus/Minus
Query      400  IHFQVLLD*IG*SPPR*NKSHKFPFRSLHEALV*ETLSSPKCTKYNCQFSLFDVGS*HSSKPRL*IIKFLVTYHTS*TSQQAPLKFFGPLKTWKICCF*PVQGK*VKS*TFNFSQLIHLYTLRPVTNL  783
                IHFQV  +*I *SP  *NK ++F FR LH+ALV +  +S K  K++CQ S FD+ S*+S +P L I+K L+TYHTS*   Q PL+ F P KTWK+   * +  K VKS +F+FSQLIHLY LR V NL
Subject   3871  IHFQVSFN*IC*SPSG*NKGYEFAFRPLHKALVQKAFTSSKGAKHDCQLSRFDIRS*YS*EPWLGIVKLLITYHTS*AP*QTPLQLFSPFKTWKVSYL*SIH*KEVKSRSFHFSQLIHLYALRAVANL  4254

Range 4: 4300 to 4653 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
133.5 bits(285) 0.0 57/118(48%) 0/118(0%) Plus/Minus
Query        1  LISKRGSHGTFFEVTW*S*IKHWIYEPPALQVVPI*LSFKKSQYVTLFSTQNGSIFLRIVCALTRITS**DESVTANNKET*INVTRGK*LNFIKDHAMTSL*ACNLSKENFEGNNIP  354
                +ISK  SHG   E+TW S +KHWI++PP L VVP+ L+ K SQY+TL S+Q  +I L ++CALT ITS  +ES+T+   +T +N+   + LN IK+ AM  L  CN  K++F+G+N+P
Subject   4300  IISKCCSHGALLEMTWQSGLKHWIHKPPTLNVVPVGLTLK*SQYITLLSSQYCAILLGVICALTGITSKRNESITSYG*QTKVNIAWREQLNLIKNDAMACLQVCNFPKKHFKGHNVP  4653

Range 5: 3873 to 4232 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
148.6 bits(318) 0.0 63/120(52%) 0/120(0%) Minus/Plus
Query      422  DW*RASKYKGG*AAKS*TFSS*PTFPERVKNNIFSKF*AGRKTSGVLAGRSNWCDK*REI**FKALACWSVNFRHQTKRIDSCTWYIWGWKEFPIQELHEEI*REICDFCFT*AGSSQFN  781
                DW R +++KGG*A KS T  S*P F E +K+N+ SKF* G K +GV A   NWCDK* E+* F+A+A  ++NF +Q  R+DS  W++W W +  +QEL+EE+*R+I + CFT  GSS+FN
Subject   3873  DWQRPAEHKGG*AEKSETICS*PPFNEWIKDNLLSKF*KG*KAAGVFARGLNWCDK**EV*RFQAMALRNINF*YQISRVDSRAWHLWSW*KLSVQELYEEV*RQIRNLCFTQKGSSKFN  4232

Range 6: 4301 to 4651 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
102.3 bits(217) 0.0 57/117(49%) 0/117(0%) Minus/Plus
Query        3  GMLLPSKFSLERLQA*RLVIA*SLMKFSYFPLVTLIYVSLLFAVTLSSH*LVILVKAHTILKKIEPFWVLNKVTY*DFLKESHIGTTWRAGGS*IQCLIQDYHVTSKKVP*LPRLLI  353
                G L P K  L +LQ *R  IA  LM+F+      L +V   + V LS   LVI VKAH   K+I  +W L++V Y*D+L+ S  GTT R GG *IQCL  D HV S++ P*L  LLI
Subject   4301  GTL*PLKCFLGKLQT*RQAIASFLMRFNCSLQAILTFVC*PYEVMLSFLLLVIPVKAHMTPKRIAQYWELSRVIY*DYLRVSPTGTTLRVGGL*IQCLSPDCHVISRRAP*LQHLLI  4651

Range 7: 4226 to 4255 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.0 bits(46) 0.0 7/10(70%) 0/10(0%) Minus/Plus
Query      399  IQSRRTWKWM  428
                IQ + TWKWM
Subject   4226  IQLKETWKWM  4255

Range 8: 3872 to 4159 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.9 bits(192) 0.0 48/96(50%) 0/96(0%) Plus/Minus
Query      495  CIGNSFQPQMYQVQLSILFV*CRKLTLQQAKALNH*ISRHLSHQLDLPASTPEVFRPAQNLENMLFLTRSGKVGQELNV*LFAAHPPLYFEARYQS  782
                C  + +Q Q  Q +LS L +* +KL   +A A N * S HLSHQL   A+TP  F+P QNLE+ L L  S K GQE  V LF+AHPPL    R QS
Subject   3872  CTESFYQLQRCQARLSTLEI*YQKLIFLRAMAWNR*TSHHLSHQLSPLANTPAAFQPFQNLESKLSLIHSLKGGQEQIVSLFSAHPPLCSAGRCQS  4159

Range 9: 4340 to 4651 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.8 bits(170) 0.0 44/104(42%) 0/104(0%) Plus/Minus
Query        3  DQQTRQSWNLF*SYMVILNQTLDL*TSGSPSCTYMTFLQEVSICHFVQHPKWLYLFENRMCFDKDHQLVR*KRHGE*QGDIDQCNQGEIAELHQRSRNDQPLGL  314
                +QQ  QSW+  *+ M +  QTLD  TS S  CT  T+ Q +SI H  Q P     F + MCFD+DHQ  +*K H     D  Q +     E HQ+ RN  P GL
Subject   4340  NQQMLQSWSPS*NDMAVWTQTLDSQTSDSQCCTCRTYPQVISIYHSAQLPVLRDPFGSHMCFDRDHQQEK*KHHFVWLTDKGQYSLEGTVEPHQK*RNGLPSGL  4651

Range 10: 3872 to 4174 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
81.7 bits(172) 0.0 53/101(52%) 0/101(0%) Minus/Plus
Query      480  RLVTGLKV*RWMSCEKLNVQLLTYFP*TGQKQHIFQVLSGPKNFRGACWEV*LV**VTRNLMIQSLGLLECQLPTSNKEN*QLYLVHLGLERVSYTRAS*R  782
                RL T  + *RWMS EK N  LLT F *  Q+   FQVL G K+ RG C   *LV**V R+L I S G  E QL  SN E+*Q  L  L L +   TRA *R
Subject   3872  RLATARRA*RWMS*EK*NDLLLTSFQ*MDQR*LTFQVLKGLKSCRGVC*GA*LV**VMRSLTIPSHGSQEYQLLISNLES*QSCLAPLELVKAFCTRAL*R  4174

Range 11: 4308 to 4649 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.3 bits(169) 0.0 49/114(43%) 0/114(0%) Minus/Plus
Query        5  CYLRSFP*KGYRPKGWSLRDL**SSAISPWLH*SMSPCYSP*RFHLTSW*SLSKHIRFSKR*SHFGC*TK*HIETS*RKVI*VQLGEPEVHKSNV*FKITM*LQKRFHDCRVC*  346
                C L S  *+  +P+G  LR  ** S +   L+* +S  ++ * FH + W*SLSKHI   K   + G * +*+IE +*  V+ VQ  E EV +SNV* +  M  Q+  HDC +C*
Subject   4308  CDL*SVS*ENCKPEGRPLRHF**GSTVPSRLY*PLSVNHTK*CFHFSCW*SLSKHI*LPKGSRNTGS*AE*YIEIT*G*VLQVQH*ESEVCESNV*VQTAMSFQEGLHDCSIC*  4649

Grapevine rupestris stem pitting associated virus complete genome, isolate PG, genomic RNA

Sequence ID: HE591388.1 Length: 8725 Number of Matches: 10

Range 1: 3871 to 4650 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
581.6 bits(1263) 0.0 240/260(92%) 0/260(0%) Minus/Plus
Query        4  KIGNGPQSIKVDELRKVKRSALDLLSLNGSKTTYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDEECKVAKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRRDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFINPMFDSRLPCNFKKGSMTAAFAD  783
                KIGNGPQSIKVDELRKVKRSALD LS+NGSK TYFPSFERAEKLQGCLLGGLTGVISDEKF+D+KPWL+G+ST+DIK RELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK DLEMD+ CKVAKAGKSKKEGWDVVTFEVFLRKV GLKAGHCVIFDEVQLFPPGYIDLCLL+IR DAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGK+YRYN+ESRRF+NPMF+SRLPC+FKKGSMTAAFAD
Subject   3871  KIGNGPQSIKVDELRKVKRSALDFLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQLFPPGYIDLCLLIIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFAD  4650

Range 2: 3873 to 4652 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
461.1 bits(1000) 0.0 207/260(80%) 0/260(0%) Plus/Minus
Query        2  *SANAAVMEPFLKLHGNLESNIGFMNLRLSKLYLYDFPSRSLNMSLCSAPKMALSF*ESYVL*QGSPASEMKASRRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFATLHSSSISRSFLIELARARLGETKVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVRPPSKHP*SFSARSKLGKYVVFDPFRESRSRAERLTFRSSSTFIL*GPLPI  781
                *SA AAV+EPFLK HG+L+SNIGF NL LS LYLY  PS SL+MSLCSAPK+A SF ESYVL* GSPASEMKAS RI  +HRSM PGGN+ TSSKITQ PAF P TFLRKTSKVTTS PSFFDLPA ATL  SSISRSFLIE A+ARLGETKVTN PSDLF+KLLY+KLFPAPNVPSTTVNSL L+S VD P SQGF SLNFSSLITPVRPPS+HP +FSARSKLGK V+ DPF E +SRA+RLTFR+SSTF+L*GPLPI
Subject   3873  *SAKAAVIEPFLK*HGSLDSNIGFTNLLLSMLYLYVLPSSSLSMSLCSAPKIARSFCESYVL*HGSPASEMKASLRIMSKHRSMYPGGNNWTSSKITQWPAFNPATFLRKTSKVTTSHPSFFDLPALATLQLSSISRSFLIEFAKARLGETKVTNLPSDLFIKLLYKKLFPAPNVPSTTVNSLGLISVVDIPESQGFASLNFSSLITPVRPPSRHPCNFSARSKLGK*VILDPFIERKSRADRLTFRNSSTFML*GPLPI  4652

Range 3: 4300 to 4653 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
149.5 bits(320) 0.0 64/118(54%) 0/118(0%) Plus/Minus
Query        1  LISKRGSHGTFFEVTW*S*IKHWIYEPPALQVVPI*LSFKKSQYVTLFSTQNGSIFLRIVCALTRITS**DESVTANNKET*INVTRGK*LNFIKDHAMTSL*ACNLSKENFEGNNIP  354
                +IS+ GSH   FEVTW*S* +HW+++PPA  V+PI L+ K+S+YVTL S QN  I LRI+CALT IT  *+ES+T  N++ *I+V+R K L+ IK+H + SL +CN S+EN +   IP
Subject   4300  IISESGSHRALFEVTW*S*FEHWVHKPPAFYVIPIRLALKQSKYVTLLSAQNCPILLRIICALTWITGK*NESITTYNEQA*IDVSRRKQLDLIKNHTVASLQSCNFSEENLKSYYIP  4653

Range 4: 3871 to 4254 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
120.7 bits(257) 0.0 54/128(42%) 0/128(0%) Plus/Minus
Query      400  IHFQVLLD*IG*SPPR*NKSHKFPFRSLHEALV*ETLSSPKCTKYNCQFSLFDVGS*HSSKPRL*IIKFLVTYHTS*TSQQAPLKFFGPLKTWKICCF*PVQGK*VKS*TFNFSQLIHLYTLRPVTNL  783
                IHF+++ D*I *S    NK ++F  R  H+ LV ETL SPKCTK++ QF   ++ S ++ KPR  I + L+TY+ S*   Q  L+ F PLK W++  F P+  K ++  + +  Q IH Y LR +T L
Subject   3871  IHFKIIFD*IC*STSGRNKGYEFTLRPFHKTLVQETLPSPKCTKHDSQFPWLNIRSGYTRKPRFCITELLITYNAS*AP*QTSLQLFSPLKAWEVGYFGPIH*KEIEGGSLDLPQFIHFYALRAITYL  4254

Range 5: 4319 to 4651 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
117.0 bits(249) 0.0 61/111(55%) 0/111(0%) Minus/Plus
Query        3  KFSLERLQA*RLVIA*SLMKFSYFPLVTLIYVSLLFAVTLSSH*LVILVKAHTILKKIEPFWVLNKVTY*DFLKESHIGTTWRAGGS*IQCLIQDYHVTSKKVP*LPRLLI  335
                +FS E+LQ *RL   * LM+ S F L T IY   L+ V LS H  VI VKAH I K+I  FW L++VTY D L+   IG T +AGG * QC  QDYHVTSK+  *LP  LI
Subject   4319  RFSSEKLQD*RLATV*FLMRSSCFLLDTSIYACSLYVVMLSFHLPVIHVKAHMIRKRIGQFWALSRVTYLDCLRARRIGIT*KAGGL*TQCSNQDYHVTSKRAR*LPLSLI  4651

Range 6: 3888 to 4238 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
96.4 bits(204) 0.0 48/117(41%) 0/117(0%) Minus/Plus
Query      416  SKYKGG*AAKS*TFSS*PTFPERVKNNIFSKF*AGRKTSGVLAGRSNWCDK*REI**FKALACWSVNFRHQTKRIDSCTWYIWGWKEFPIQELHEEI*REICDFCFT*AGSSQFNQE  766
                S++K G* A+         F E V+NN+  K *AG K + + A   NW  K* E+ * K LA W +++ +  K ID   WYIWGW+EF +QE +E++*  I + CF+    S+FNQ+
Subject   3888  SEHKSG*IAEGQAIRPRFPFNEWVQNNLLPKL*AG*KVARMSARGPNWRYK**EVQ*CKTLAFWYIHYGY*AKGIDCRAWYIWGWEEFLVQEFYEKV*G*IRNLCFSQTCFSKFNQK  4238

Range 7: 4322 to 4651 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.9 bits(192) 0.0 51/110(46%) 0/110(0%) Plus/Minus
Query        3  DQQTRQSWNLF*SYMVILNQTLDL*TSGSPSCTYMTFLQEVSICHFVQHPKWLYLFENRMCFDKDHQLVR*KRHGE*QGDIDQCNQGEIAELHQRSRNDQPLGL*PF*GK  332
                +Q+ RQS + F*S MV+L +TL   TS     TY +  Q V +CH  Q PK    F N MCFD DH+ V+*K H  *   ID+C Q E    HQ+S + QP  L  F*GK
Subject   4322  NQRKRQSSSPF*SDMVVLIRTLGSQTSCFLCYTYTSCPQAV*VCHSAQRPKLPDPFANHMCFDMDHRQVK*KHHYV**ASIDRCIQEETTGPHQKSHSGQPSILQLF*GK  4651

Range 8: 3872 to 4159 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.0 bits(142) 0.0 42/96(44%) 0/96(0%) Plus/Minus
Query      495  CIGNSFQPQMYQVQLSILFV*CRKLTLQQAKALNH*ISRHLSHQLDLPASTPEVFRPAQNLENMLFLTRSGKVGQELNV*LFAAHPPLYFEARYQS  782
                C  NS QPQMYQ + SI   *      Q+AK L+H* S HL  QL   A     F+PAQ+L + LF T S K  +    *  A HP L  E  Y S
Subject   3872  CTRNSSQPQMYQARQSIPLA*YP*WIYQKAKVLHH*TSHHL*RQLGPLADILATFQPAQSLGSRLFWTHSLKGNRGRIA*PSAIHPLLCSEGHYLS  4159

Range 9: 4305 to 4640 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
87.7 bits(185) 0.0 51/112(46%) 0/112(0%) Minus/Plus
Query       14  CCYLRSFP*KGYRPKGWSLRDL**SSAISPWLH*SMSPCYSP*RFHLTSW*SLSKHIRFSKR*SHFGC*TK*HIETS*RKVI*VQLGEPEVHKSNV*FKITM*LQKRFHDCR  349
                C     FP K  R +GW L D **   +S W+H SM   Y+ * FH T  *S+SKHI F+K   +FG * +*H  T+* + +*V   + EV + NV  K TM LQK   DCR
Subject   4305  CSNF*GFPQKSCRIEGWPLCDF**GPVVSSWIHRSMLAHYT**CFHFTCR*SMSKHI*FAKGSGNFGR*AE*HT*TA*GQDV*V*HRKQEVCEPNVRIKTTMSLQKGLDDCR  4640

Range 10: 3872 to 4174 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.4 bits(132) 0.0 41/101(41%) 0/101(0%) Minus/Plus
Query      480  RLVTGLKV*RWMSCEKLNVQLLTYFP*TGQKQHIFQVLSGPKNFRGACWEV*LV**VTRNLMIQSLGLLECQLPTSNKEN*QLYLVHLGLERVSYTRAS*R  782
                R V  L+ *+WM+C + +      F * G K    Q LSG K+ +  C   *L  *V R+ ++Q+LG L   L   ++ N*   LVHLGL RVS TR  *+
Subject   3872  R*VMALRA*KWMNCGRSSDPPSISFQ*MGPK*PTSQALSGLKSCKDVC*GA*LAL*VMRSSVMQNLGFLVYPLRILSQGN*LSCLVHLGLGRVSCTRVL*K  4174

Nucleotide Sequence (498 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 33 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
50
100
150
200
250
300
350
400
450
498

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome

Sequence ID: KR054734.1 Length: 8753 Number of Matches: 9

Range 1: 5188 to 5532 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
275.1 bits(594) 0.0 112/115(97%) 0/115(0%) Minus/Plus
Query        1  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPPN  345
                WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYE TQQFFDEHRGG GEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVP N
Subject   5188  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLN  5532

Range 2: 5077 to 5139 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.9 bits(83) 0.0 17/21(81%) 0/21(0%) Minus/Plus
Query      394  VWEGKLYGGPWLKVMLFLGQD  456
                V E KL G PWLKVMLFLGQD
Subject   5077  VREEKLCGDPWLKVMLFLGQD  5139

Range 3: 5187 to 5525 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
220.1 bits(474) 0.0 92/113(81%) 0/113(0%) Plus/Minus
Query        8  GTLERKVSSKNFPYGFARLNFAAST*GLENFRRFRTAMRKVMESFPLCLG*MLSNLSHALLNCSPVPPLCSSKNC*VTSYPQRTSRCSFKAILPTQRALVDSRLLRGM*VLNH  346
                GT ++ VSS+NFP GFARL+FAAST G ENF+RFRTA++KVMES PLCLG*MLSNLS ALLNCSP+PPLCSSKNC*V SYPQRTSRCSFKAI PT  ALVDSRLL+GM VLNH
Subject   5187  GTFDKNVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSNLSQALLNCSPIPPLCSSKNC*VVSYPQRTSRCSFKAIFPTHLALVDSRLLKGMCVLNH  5525

Range 4: 5076 to 5120 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.9 bits(48) 0.0 9/15(60%) 0/15(0%) Plus/Minus
Query      413  MTLSHGPPYNFPSHT  457
                +TLSHG P++F S T
Subject   5076  ITLSHGSPHSFSSLT  5120

Range 5: 5077 to 5532 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
158.2 bits(339) 0.0 77/152(51%) 0/152(0%) Plus/Minus
Query        1  IRWNLRKESV**ELPVWLCAPQFCSFNLRLRKF*TLSDGHEEGYGIIPLMPWVNAFKSFTCVTQLLTGSTPVLIKKLLSYLISTTHLPVFFQGHFTHPAGPCRLQIA*GDVSFKPLFI*AFQFHFLDFTILILT*KKHDFKPWTTI*LPLPY  456
                I+WN  ++ V  +  + LCAP  CS +L L K *TL D H +  GII LM  VNAFKSFT +  LL  +  V I++LLS LI  THL V FQGHF  P+ P  LQIA G V F+P FI*  +    +FTI IL *+KH+FKPW T    LP+
Subject   5077  IQWNF*QKCVKQKFSIRLCAP*LCSLHLWL*KL*TLPDSH*KSDGIITLMSRVNAFKSFTSIA*LLAHTPSVFIEELLSCLIPATHLTVLFQGHFPDPSSPG*LQIAQGYVCFEPFFI*TLRLKLFNFTIFILA*EKHNFKPWVTTQFFLPH  5532

Range 6: 5096 to 5506 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
145.9 bits(312) 0.0 70/137(51%) 0/137(0%) Plus/Minus
Query       27  CLVRTSRMALRASILQLQLEA*KILDAFGRP*GRLWNHSPYALGKCFQIFHMRYSIAHRFHPCAHQKIVELPHIHNAPPGVLSRPFYPPSGPLSTPDCLGGCEF*TTLHLSIPIPFPRLHNPHLDLEKA*L*AMDHH  437
                C       ALRA  LQ  L A K L+A G+P  + WNH PY  GKCFQIFH    IA  +  C H++  EL H  NAP G LSRPF  P  P  TPDC   C F*T LHL+      +LHN H  L KA*L*AM HH
Subject   5096  CQAEIFHKALRALALQPPLVALKTLNASGQPLKK*WNHYPYV*GKCFQIFHKHCLIARPYPLCVHRRTAELSHTRNAPHGALSRPFSRPI*PWLTPDCSRVCVF*TILHLNTQTQALQLHNLHPGLRKA*L*AMGHH  5506

Range 7: 5081 to 5482 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
128.0 bits(273) 0.0 73/134(54%) 0/134(0%) Minus/Plus
Query       51  GRGSYMVVHGLKSCFF*VKMRIVKSRKWNWNAQMKSGLKLTSP*AIWSRQGPAGWVKWP*KNTGRCVVDMR*LNNFLMSTGVEPVSN*VTHVKDLKAFTQGIRGMIXXXXXXXXXSV*NFLSLKLKLQN*GAQS  452
                GR + +V HGLK CF * +M+IVK +  + + QMK+G K T P*AIWS+ G  G  KWP*K+T RCV  MR L++  M+T     SN*   VKDLKAFT  IR MIP    W S SV*+F S K +LQ+*GAQS
Subject   5081  GRKNCVVTHGLKLCFS*ARMKIVKLKSLSLSVQMKNGSKHTYP*AIWSQPGLDGSGKWP*KSTVRCVAGMRQLSSSSMNTEGVWASN*AMLVKDLKAFTLDIRVMIPSLF*WLSGSV*SFQSHKWRLQS*GAQS  5482

Range 8: 5172 to 5507 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.0 bits(166) 0.0 55/112(49%) 0/112(0%) Minus/Plus
Query       26  MLK*RVV*NSHPPKQSGVDKGPLGG*NGLERTPGGALWI*GNSTIF**AQGWNR*AIE*RM*KI*KHLPKA*GE*FHNLPHGRPXXXXXXXXXXXXXXIEARKAIREVLTRH  361
                + K*R+V N+H  +QSGV++G +G  NGLER P GAL +* NS +  * Q     AI+  +*KI*KHLP  *G *FH+  +G P+A K+F A+S  CK +ARKA+ ++   H
Subject   5172  VFK*RMVQNTHTLEQSGVNQG*MGRENGLERAP*GALRV*DNSAVLR*TQRGYGRAIKQCL*KI*KHLP*T*G**FHHFFNGCPEAFKVFKATSGGCKAKARKALWKISA*H  5507

Range 9: 5082 to 5126 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.9 bits(48) 0.0 9/15(60%) 0/15(0%) Minus/Plus
Query      407  GGEVIWWSMA*SHAF  451
                GG+ +W  MA*S+AF
Subject   5082  GGKTVW*PMA*SYAF  5126

Rupestris stem pitting associated virus strain BS, complete genome

Sequence ID: AY881627.1 Length: 8743 Number of Matches: 9

Range 1: 5188 to 5532 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
277.8 bits(600) 0.0 113/115(98%) 0/115(0%) Minus/Plus
Query        1  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPPN  345
                WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLD+FLSKVP N
Subject   5188  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKVPLN  5532

Range 2: 5077 to 5139 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.1 bits(92) 0.0 18/21(86%) 0/21(0%) Minus/Plus
Query      394  VWEGKLYGGPWLKVMLFLGQD  456
                V E KLYG PWLKVMLFLGQD
Subject   5077  VREEKLYGDPWLKVMLFLGQD  5139

Range 3: 5080 to 5532 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
298.4 bits(645) 0.0 126/151(83%) 0/151(0%) Plus/Minus
Query        1  IRWNLRKESV**ELPVWLCAPQFCSFNLRLRKF*TLSDGHEEGYGIIPLMPWVNAFKSFTCVTQLLTGSTPVLIKKLLSYLISTTHLPVFFQGHFTHPAGPCRLQIA*GDVSFKPLFI*AFQFHFLDFTILILT*KKHDFKPWTTI*LPLP  453
                I+W+ R + + *EL +W   P F SFNL L KF*T SDGHEEGYGIIPLMPWVNA KSFTCVTQLLTGSTPV IKKLLSY ISTTHLPVFFQGHFTHPAGPCRLQIA*GDVSFKPLFI*AFQFH LDFTILILT*KKHDF+PW TI*L LP
Subject   5080  IQWDFR*KRIQ*ELSIWFSPP*FGSFNLGL*KF*TFSDGHEEGYGIIPLMPWVNALKSFTCVTQLLTGSTPVFIKKLLSYFISTTHLPVFFQGHFTHPAGPCRLQIA*GDVSFKPLFI*AFQFHLLDFTILILT*KKHDFQPWITI*LLLP  5532

Range 4: 5096 to 5500 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
287.9 bits(622) 0.0 117/135(87%) 0/135(0%) Plus/Minus
Query       33  VRTSRMALRASILQLQLEA*KILDAFGRP*GRLWNHSPYALGKCFQIFHMRYSIAHRFHPCAHQKIVELPHIHNAPPGVLSRPFYPPSGPLSTPDCLGGCEF*TTLHLSIPIPFPRLHNPHLDLEKA*L*AMDHH  437
                +RT  M   A + QLQ  A KILD FGRP*GRLWNHSPYALGKC QIFHMRYSIAHRFHPC HQKIVEL HIHNAPPGVLSRPFYPPSGPLSTPDCLGGCEF*TTLHLSIPIP PRLHNPHLDLEKA*L AMDHH
Subject   5096  IRTFHMV*PALVWQLQPGALKILDVFGRP*GRLWNHSPYALGKCSQIFHMRYSIAHRFHPCVHQKIVELLHIHNAPPGVLSRPFYPPSGPLSTPDCLGGCEF*TTLHLSIPIPSPRLHNPHLDLEKA*LSAMDHH  5500

Range 5: 5081 to 5527 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
271.0 bits(585) 0.0 126/149(85%) 0/149(0%) Minus/Plus
Query        6  GRGSYMVVHGLKSCFF*VKMRIVKSRKWNWNAQMKSGLKLTSP*AIWSRQGPAGWVKWP*KNTGRCVVDMR*LNNFLMSTGVEPVSN*VTHVKDLKAFTQGIRGMIXXXXXXXXXSV*NFLSLKLKLQN*GAQSHTGSSY*TLSFLRFH  452
                GR SYMV+HG KSCFF*VKMRIVKSR+WNWNAQMKSGLKLTSP*AIWSRQGPAGWVKWP*KNTGRCVVDM+*LNNFLM+TGVEPVSN*VTHVKDL+AFTQGIRGMIP*PSSWPSE+V*NF S +LKL N*G  +H  SSY  L +L+ H
Subject   5081  GRRSYMVIHG*KSCFF*VKMRIVKSRRWNWNAQMKSGLKLTSP*AIWSRQGPAGWVKWP*KNTGRCVVDMK*LNNFLMNTGVEPVSN*VTHVKDLRAFTQGIRGMIP*PSSWPSENV*NFQSPRLKLPN*GGLNHMESSYWILFYLKSH  5527

Range 6: 5187 to 5525 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
247.1 bits(533) 0.0 105/113(93%) 0/113(0%) Plus/Minus
Query        8  GTLERKVSSKNFPYGFARLNFAAST*GLENFRRFRTAMRKVMESFPLCLG*MLSNLSHALLNCSPVPPLCSSKNC*VTSYPQRTSRCSFKAILPTQRALVDSRLLRGM*VLNH  346
                GTL+RK S+KNFPYG ARL+ AAST G ENFRRFRTAMRKVMESFPLCLG*MLSNLSHALLNCSPVPPLCSSKNC*VTSYPQRTSRCSFKAILPTQRALVDSRLLRGM*VLNH
Subject   5187  GTLDRKESNKNFPYGLARLSLAASTWGFENFRRFRTAMRKVMESFPLCLG*MLSNLSHALLNCSPVPPLCSSKNC*VTSYPQRTSRCSFKAILPTQRALVDSRLLRGM*VLNH  5525

Range 7: 5076 to 5120 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.5 bits(58) 0.0 11/15(73%) 0/15(0%) Plus/Minus
Query      413  MTLSHGPPYNFPSHT  457
                MT SHG PYNF S T
Subject   5076  MTFSHGSPYNFSSLT  5120

Range 8: 5166 to 5423 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
188.5 bits(405) 0.0 83/86(97%) 0/86(0%) Minus/Plus
Query      110  IGMLK*RVV*NSHPPKQSGVDKGPLGG*NGLERTPGGALWI*GNSTIF**AQGWNR*AIE*RM*KI*KHLPKA*GE*FHNLPHGRP  367
                IGMLK*RVV*NSHPPKQSGVDKGPLGG*NGLERTPGGALWI* NSTIF** QGWNR*AIE*RM*KI*+HLPKA*GE*FHNLPHGRP
Subject   5166  IGMLK*RVV*NSHPPKQSGVDKGPLGG*NGLERTPGGALWI*SNSTIF**TQGWNR*AIE*RM*KI*EHLPKA*GE*FHNLPHGRP  5423

Range 9: 5082 to 5126 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.8 bits(63) 0.0 13/15(87%) 0/15(0%) Minus/Plus
Query      407  GGEVIWWSMA*SHAF  451
                GGEVIW SMA SHAF
Subject   5082  GGEVIW*SMAESHAF  5126

Grapevine rupestris stem pitting associated virus isolate SK30, complete genome

Sequence ID: KX274277.1 Length: 8724 Number of Matches: 9

Range 1: 5188 to 5532 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
276.5 bits(597) 0.0 112/115(97%) 0/115(0%) Minus/Plus
Query        1  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPPN  345
                WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRA+PYGKFLLD+FLSKVP N
Subject   5188  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRARPYGKFLLDSFLSKVPLN  5532

Range 2: 5077 to 5139 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.1 bits(92) 0.0 18/21(86%) 0/21(0%) Minus/Plus
Query      394  VWEGKLYGGPWLKVMLFLGQD  456
                V E KLYG PWLKVMLFLGQD
Subject   5077  VREEKLYGDPWLKVMLFLGQD  5139

Range 3: 5083 to 5532 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
296.6 bits(641) 0.0 125/150(83%) 0/150(0%) Plus/Minus
Query        1  IRWNLRKESV**ELPVWLCAPQFCSFNLRLRKF*TLSDGHEEGYGIIPLMPWVNAFKSFTCVTQLLTGSTPVLIKKLLSYLISTTHLPVFFQGHFTHPAGPCRLQIA*GDVSFKPLFI*AFQFHFLDFTILILT*KKHDFKPWTTI*LPL  450
                I+W+ R + + *EL +W   P F SFNL L KF*TLSDGHEEGYG+IPLMPWVNAFKSFTCVTQLLTGSTPV IKKLLSY ISTTHLPVFFQGHFTHPAGPCRLQIA*GDVSFKPLFI*AFQFH LDFTILILT*+KHDF+PW TI*L L
Subject   5083  IQWDFR*KRIQ*ELSIWSSPP*FGSFNLGL*KF*TLSDGHEEGYGVIPLMPWVNAFKSFTCVTQLLTGSTPVFIKKLLSYFISTTHLPVFFQGHFTHPAGPCRLQIA*GDVSFKPLFI*AFQFHLLDFTILILT*EKHDFQPWITI*LLL  5532

Range 4: 5096 to 5500 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
287.9 bits(622) 0.0 117/135(87%) 0/135(0%) Plus/Minus
Query       33  VRTSRMALRASILQLQLEA*KILDAFGRP*GRLWNHSPYALGKCFQIFHMRYSIAHRFHPCAHQKIVELPHIHNAPPGVLSRPFYPPSGPLSTPDCLGGCEF*TTLHLSIPIPFPRLHNPHLDLEKA*L*AMDHH  437
                +RT  M   A + QLQ  A KILDAFGRP*GRLW+HSPYALGKCFQIFHMRYSIAHRFHPC HQKIVEL HIHNAPPGVLSRPFYPPSGPLSTPDCLGGCEF*TTLHLSIPIP PRLHNPHLDL KA*L AMDHH
Subject   5096  IRTFHMV*PALVWQLQPGALKILDAFGRP*GRLWSHSPYALGKCFQIFHMRYSIAHRFHPCVHQKIVELLHIHNAPPGVLSRPFYPPSGPLSTPDCLGGCEF*TTLHLSIPIPSPRLHNPHLDLGKA*LSAMDHH  5500

Range 5: 5084 to 5527 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
263.2 bits(568) 0.0 125/148(84%) 0/148(0%) Minus/Plus
Query        6  RGSYMVVHGLKSCFF*VKMRIVKSRKWNWNAQMKSGLKLTSP*AIWSRQGPAGWVKWP*KNTGRCVVDMR*LNNFLMSTGVEPVSN*VTHVKDLKAFTQGIRGMIXXXXXXXXXSV*NFLSLKLKLQN*GAQSHTGSSY*TLSFLRFH  449
                R SYMV+HG KSCF *VKMRIVKSR+WNWNAQMKSGLKLTSP*AIWSRQGPAGWVKWP*KNTGRCVVDM+*LNNFLM+TGVEPVSN*VTHVKDLKAFTQGIRGM P*PSSWPSESV*NF S +LKL N*G   H  SSY  L +L+ H
Subject   5084  RRSYMVIHG*KSCFS*VKMRIVKSRRWNWNAQMKSGLKLTSP*AIWSRQGPAGWVKWP*KNTGRCVVDMK*LNNFLMNTGVEPVSN*VTHVKDLKAFTQGIRGMTP*PSSWPSESV*NFQSPRLKLPN*GGLDHMESSYWILFYLKSH  5527

Range 6: 5187 to 5525 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
247.1 bits(533) 0.0 105/113(93%) 0/113(0%) Plus/Minus
Query        8  GTLERKVSSKNFPYGFARLNFAAST*GLENFRRFRTAMRKVMESFPLCLG*MLSNLSHALLNCSPVPPLCSSKNC*VTSYPQRTSRCSFKAILPTQRALVDSRLLRGM*VLNH  346
                GTL+RK S+KNFPYG ARL+ AAST G ENFRRFRTAMRKVMESFPLCLG*MLSNLSHALLNCSPVPPLCSSKNC*VTSYPQRTSRCSFKAILPTQRALVDSRLLRGM*VLNH
Subject   5187  GTLDRKESNKNFPYGLARLSLAASTWGFENFRRFRTAMRKVMESFPLCLG*MLSNLSHALLNCSPVPPLCSSKNC*VTSYPQRTSRCSFKAILPTQRALVDSRLLRGM*VLNH  5525

Range 7: 5076 to 5120 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.5 bits(58) 0.0 11/15(73%) 0/15(0%) Plus/Minus
Query      413  MTLSHGPPYNFPSHT  457
                MT SHG PYNF S T
Subject   5076  MTFSHGSPYNFSSLT  5120

Range 8: 5166 to 5423 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
187.6 bits(403) 0.0 83/86(97%) 0/86(0%) Minus/Plus
Query      110  IGMLK*RVV*NSHPPKQSGVDKGPLGG*NGLERTPGGALWI*GNSTIF**AQGWNR*AIE*RM*KI*KHLPKA*GE*FHNLPHGRP  367
                IGMLK*RVV*NSHPPKQSGVDKGPLGG*NGLERTPGGALWI* NSTIF** QGWNR*AIE*RM*KI*KHLPKA*GE* HNLPHGRP
Subject   5166  IGMLK*RVV*NSHPPKQSGVDKGPLGG*NGLERTPGGALWI*SNSTIF**TQGWNR*AIE*RM*KI*KHLPKA*GE*LHNLPHGRP  5423

Range 9: 5085 to 5126 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.0 bits(57) 0.0 12/14(86%) 0/14(0%) Minus/Plus
Query      407  GEVIWWSMA*SHAF  448
                GEVIW SMA SHAF
Subject   5085  GEVIW*SMAESHAF  5126

Grapevine rupestris stem pitting associated virus isolate CS BR, complete genome

Sequence ID: KX958435.1 Length: 8743 Number of Matches: 7

Range 1: 5189 to 5533 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
275.1 bits(594) 0.0 112/115(97%) 0/115(0%) Minus/Plus
Query        1  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPPN  345
                WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYE TQQFFDEHRGG GEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVP N
Subject   5189  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLN  5533

Range 2: 5078 to 5140 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.9 bits(83) 0.0 17/21(81%) 0/21(0%) Minus/Plus
Query      394  VWEGKLYGGPWLKVMLFLGQD  456
                V E KL G PWLKVMLFLGQD
Subject   5078  VREEKLCGDPWLKVMLFLGQD  5140

Range 3: 5188 to 5526 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
216.0 bits(465) 0.0 91/113(81%) 0/113(0%) Plus/Minus
Query        8  GTLERKVSSKNFPYGFARLNFAAST*GLENFRRFRTAMRKVMESFPLCLG*MLSNLSHALLNCSPVPPLCSSKNC*VTSYPQRTSRCSFKAILPTQRALVDSRLLRGM*VLNH  346
                GT +RKVSS+NFP GFARL+FAAST G ENFRRFRTA++KVMES PLCLG*MLS  S ALLNCSP+PPLCSSKNC*V SYP RTSRCSFKAI PT  ALVDS+LL+GM VLNH
Subject   5188  GTFDRKVSSRNFP*GFARLSFAASTCGFENFRRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPIPPLCSSKNC*VVSYPHRTSRCSFKAIFPTHLALVDSKLLKGMCVLNH  5526

Range 4: 5078 to 5527 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
147.2 bits(315) 0.0 73/150(49%) 0/150(0%) Plus/Minus
Query        7  WNLRKESV**ELPVWLCAPQFCSFNLRLRKF*TLSDGHEEGYGIIPLMPWVNAFKSFTCVTQLLTGSTPVLIKKLLSYLISTTHLPVFFQGHFTHPAGPCRLQIA*GDVSFKPLFI*AFQFHFLDFTILILT*KKHDFKPWTTI*LPLPY  456
                W+ R ESV  E P+ LC P   SF+L L K    SDGH +G G+I L+  +NAFK+FT +  LL  S PV I++LLS  I T++L V  QGHF +P+ P  LQIA G V F+P FI*  +    +FT+LIL *+KH+F P  T  L L Y
Subject   5078  WDFR*ESVKQEFPIRLCTP*LRSFHLWL*KLQAFSDGH*KGNGVIALVSRINAFKTFTGIA*LLAHSPPVFIEELLSCFIPTSYLTVLLQGHFPNPSSPG*LQIAQGYVCFEPFFI*TLRLKLFNFTVLILA*EKHNF*PRITTQLFLSY  5527

Range 5: 5097 to 5513 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
133.5 bits(285) 0.0 66/139(47%) 0/139(0%) Plus/Minus
Query       21  GKCLVRTSRMALRASILQLQLEA*KILDAFGRP*GRLWNHSPYALGKCFQIFHMRYSIAHRFHPCAHQKIVELPHIHNAPPGVLSRPFYPPSGPLSTPDCLGGCEF*TTLHLSIPIPFPRLHNPHLDLEKA*L*AMDHH  437
                GKC    S  AL A   QL   A K    FGRP  R W+H P    KCFQ  H    IA  F PC H++I EL H H  P G  SRPF  P  P  TP+C   C F*T LHL+      +LH+PH  L KA*L A DHH
Subject   5097  GKCQAGISHKALHALASQLPPVALKTSGVFGRPLKR*WSHCPCV*DKCFQNVHRHCLIARPFPPCVHRRIAELFHTHIVPHGAPSRPFSQPI*PWLTPNCSRVCVF*TILHLNTQTQALQLHSPHPGLRKA*LLATDHH  5513

Range 6: 5079 to 5528 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
115.6 bits(246) 0.0 72/150(48%) 0/150(0%) Minus/Plus
Query        6  YGRGSYMVVHGLKSCFF*VKMRIVKSRKWNWNAQMKSGLKLTSP*AIWSRQGPAGWVKWP*KNTGRCVVDMR*LNNFLMSTGVEPVSN*VTHVKDLKAFTQGIRGMIXXXXXXXXXSV*NFLSLKLKLQN*GAQSHTGSSY*TLSFLRFH  455
                Y R S +V+ G K CF * +MR VK +  + + QMK+G K T P*AIWS+ G  G  KWP*++T R  V M+ L+N  M+TG E  SN*   V  LKAF    R M P P  WPSE+ *+F S + KL++*G QS  G+S  TLS+ + H
Subject   5079  YERKSCVVIRG*KLCFS*ARMRTVKLKSLSLSVQMKNGSKHTYP*AIWSQPGLDGLGKWP*RSTVRYDVGMKQLSNSSMNTGGEWASN*AMPVNVLKAFILDTRAMTPLPF*WPSENA*SFQSHRWKLRS*GVQSLMGNSCLTLSYRKSH  5528

Range 7: 5173 to 5514 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.2 bits(173) 0.0 52/114(46%) 0/114(0%) Minus/Plus
Query       20  MLK*RVV*NSHPPKQSGVDKGPLGG*NGLERTPGGALWI*GNSTIF**AQGWNR*AIE*RM*KI*KHLPKA*GE*FHNLPHGRPXXXXXXXXXXXXXXIEARKAIREVLTRHFP  361
                + K*R+V N+H  +Q GV++G +G  NGLE  P G +W+* NS I  * QG N  AI+  +*  *KHL    G+* H L +GRPK  ++F A+  SC+ +A KA+ E+   HFP
Subject   5173  VFK*RMVQNTHTLEQFGVNQG*MGWENGLEGAP*GTMWV*NNSAILR*TQGGNGRAIKQCL*TF*KHLS*TQGQ*LHYLFNGRPKTPEVFKATGGSCEAKACKALWEIPA*HFP  5514

Grapevine rupestris stem pitting associated virus isolate Tannat Rspav1, complete genome

Sequence ID: KR528585.1 Length: 8595 Number of Matches: 9

Range 1: 5170 to 5514 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
277.8 bits(600) 0.0 113/115(98%) 0/115(0%) Minus/Plus
Query        1  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPPN  345
                WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLD+FLSKVP N
Subject   5170  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKVPLN  5514

Range 2: 5059 to 5121 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.9 bits(83) 0.0 17/21(81%) 0/21(0%) Minus/Plus
Query      394  VWEGKLYGGPWLKVMLFLGQD  456
                V E KL G PWLKVMLFLGQD
Subject   5059  VREEKLCGDPWLKVMLFLGQD  5121

Range 3: 5062 to 5508 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
233.4 bits(503) 0.0 100/149(67%) 0/149(0%) Plus/Minus
Query        7  WNLRKESV**ELPVWLCAPQFCSFNLRLRKF*TLSDGHEEGYGIIPLMPWVNAFKSFTCVTQLLTGSTPVLIKKLLSYLISTTHLPVFFQGHFTHPAGPCRLQIA*GDVSFKPLFI*AFQFHFLDFTILILT*KKHDFKPWTTI*LPLP  453
                W+ R++ V**ELP+WL  P F SFNL LRKF TLSD H+EGY II  MPWVNAFK  TC+ QLLT ST +LIK+LLS+ I+TTHLP+ FQGHFTHP GP  LQI  GDV FKP FI*AF  H  +FTILILT +KHDF PW T  L LP
Subject   5062  WDFRQKGV**ELPIWLGPP*FGSFNLGLRKFETLSDSHKEGY*IISFMPWVNAFKPLTCIAQLLTSSTSMLIKELLSHFITTTHLPMLFQGHFTHPPGPG*LQITQGDVGFKPFFI*AF*LHLFNFTILILTQEKHDF*PWVTTQLLLP  5508

Range 4: 5169 to 5507 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
221.5 bits(477) 0.0 95/113(84%) 0/113(0%) Plus/Minus
Query        8  GTLERKVSSKNFPYGFARLNFAAST*GLENFRRFRTAMRKVMESFPLCLG*MLSNLSHALLNCSPVPPLCSSKNC*VTSYPQRTSRCSFKAILPTQRALVDSRLLRGM*VLNH  346
                GTL+RK S++NFPYG AR + AAST G EN RRFRTA+RKV+ESFPLCLG*MLSNLSHALL+CSPVPPLCSSKNC*VTS PQRTSRCSFKAILPT  ALVDSRLLRGM VLNH
Subject   5169  GTLDRKESNRNFPYGLARRSLAASTWGFENLRRFRTAIRKVIESFPLCLG*MLSNLSHALLSCSPVPPLCSSKNC*VTS*PQRTSRCSFKAILPTHLALVDSRLLRGMWVLNH  5507

Range 5: 5058 to 5102 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
25.8 bits(50) 0.0 9/15(60%) 0/15(0%) Plus/Minus
Query      413  MTLSHGPPYNFPSHT  457
                MT +HG P+NF S T
Subject   5058  MTFNHGSPHNFSSLT  5102

Range 6: 5063 to 5509 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
197.6 bits(425) 0.0 100/149(67%) 0/149(0%) Minus/Plus
Query        6  GRGSYMVVHGLKSCFF*VKMRIVKSRKWNWNAQMKSGLKLTSP*AIWSRQGPAGWVKWP*KNTGRCVVDMR*LNNFLMSTGVEPVSN*VTHVKDLKAFTQGIRGMIXXXXXXXXXSV*NFLSLKLKLQN*GAQSHTGSSY*TLSFLRFH  452
                GR S +V HG KSCF  VKMRIVK ++W+ NAQMK+GLK TSP* IWS+ GP GWVKWP*K+ GRCVV M+*LNN LMS  VE VSN*  HV+ LKAFTQGI+ MI *PS W SESV NF S +LKL N G  SH GSSY*T   L+ H
Subject   5063  GRRSCVVTHG*KSCFSWVKMRIVKLKRWSQNAQMKNGLKPTSP*VIWSQPGPGGWVKWP*KSIGRCVVVMK*LNNSLMSIEVELVSN*AMHVRGLKAFTQGIKEMIQ*PSLWLSESVSNFRSPRLKLPNYGGPSHMGSSY*TPFCLKSH  5509

Range 7: 5078 to 5491 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
195.3 bits(420) 0.0 88/138(64%) 0/138(0%) Plus/Minus
Query       24  KCLVRTSRMALRASILQLQLEA*KILDAFGRP*GRLWNHSPYALGKCFQIFHMRYSIAHRFHPCAHQKIVELPHIHNAPPGVLSRPFYPPSGPLSTPDCLGGCEF*TTLHLSIPIPFPRLHNPHLDLEKA*L*AMDHH  437
                + L+ TS MA  A + QLQ  A KI DAFG+P*GRL NH  YALGKCFQ  HM  S+AH+FH  AHQ+IVE  H HNAPP  LSRPFYPP+ P  TPD  GGC F*T LHLSI  P  +LHNPHLD  KA*L  M HH
Subject   5078  RSLIGTSHMAWPAVVWQLQPGASKI*DAFGQP*GRLLNHFLYALGKCFQTSHMHCSVAHQFHLYAHQRIVESLHNHNAPPDALSRPFYPPTWPWLTPDYSGGCGF*TILHLSILTPSLQLHNPHLDPGKA*LLTMGHH  5491

Range 8: 5148 to 5405 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
120.2 bits(256) 0.0 57/86(66%) 0/86(0%) Minus/Plus
Query      110  IGMLK*RVV*NSHPPKQSGVDKGPLGG*NGLERTPGGALWI*GNSTIF**AQGWNR*AIE*RM*KI*KHLPKA*GE*FHNLPHGRP  367
                + MLK*R+V*N HPP+ SGV++G +GG*NGLER  GGALW+* +STI **A  WN *A E  M*++*KHLPKA* +*F+NLP+G P
Subject   5148  VRMLK*RMV*NPHPPE*SGVNQGQVGG*NGLERASGGALWL*SDSTIL**A*RWNW*ATEQCM*EV*KHLPKA*RK*FNNLPYGCP  5405

Range 9: 5064 to 5108 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
27.2 bits(53) 0.0 10/15(67%) 0/15(0%) Minus/Plus
Query      407  GGEVIWWSMA*SHAF  451
                GGEV+W  M  SHAF
Subject   5064  GGEVVW*PMVKSHAF  5108

Nucleotide Sequence (986 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 33 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
99
198
297
396
495
594
693
792
891
986

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate SK704 A, complete genome

Sequence ID: KX274274.1 Length: 8725 Number of Matches: 7

Range 1: 1174 to 2064 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
671.4 bits(1459) 0.0 292/297(98%) 0/297(0%) Plus/Plus
Query        2  ISCGRSGSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGNAHFNRQRAPYSLGISHWLNSPFSVEHKFAGAINHQILHVALSLVPLSNDPFFKLTPREVDSALSSVRMALGITGQSKLFGFLVNDTLINEMQRRYKLRLAKHLKSLTWYFHFCGCQWXXXXXXXXXXXXGDRKTSFADLDCNVAQIYRLVSAQVTAPGVLLGLTKVYARYSNPQQQLNSLNVLEGKSCKSVQPSDTYSGET  892
                ISCGRSGSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGN HFNRQRAPYSLGISHWLNSPFSVEHKFAGAINHQILHVALSLVPLSNDPFFKLTPREVDSALSSVRMALGITGQSKLFGFLVNDTLINEMQRRYKLRLAKHLKSLTWYFHFCGCQWFLLNRRVNL+FLGDRK+SFADLDCNVAQIYRLVSAQVTAPGVLLGLTKVYA YSNPQQQLNSLNVLEGKSCK+VQPSDTYSGET
Subject   1174  ISCGRSGSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGNVHFNRQRAPYSLGISHWLNSPFSVEHKFAGAINHQILHVALSLVPLSNDPFFKLTPREVDSALSSVRMALGITGQSKLFGFLVNDTLINEMQRRYKLRLAKHLKSLTWYFHFCGCQWFLLNRRVNLKFLGDRKSSFADLDCNVAQIYRLVSAQVTAPGVLLGLTKVYAHYSNPQQQLNSLNVLEGKSCKTVQPSDTYSGET  2064

Range 2: 1173 to 2063 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
641.2 bits(1393) 0.0 291/297(98%) 0/297(0%) Minus/Minus
Query        1  VSPEYVSEGCTDLHDLPSRTFKELSCC*GLE*RA*TLVKPNKTPGAVT*AETKR*I*ATLQSRSAKEVFRSPRNLRLTLRFKRNH*QPQKWKYQVSDFKCLASLNLYLLCISFMRVSFTKKPKSLDCPVIPRAILTLERAESTSLGVSLKKGSFDKGTKDRATCRIWWLMAPANLCSTENGELSQCDIPSEYGAL*RLKCALPSPNHELXXXXXXXXXXXSLRQENKNRCSKKSGVTSIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREPLRPQLI  891
                VSPEYVSEGCT LHDLPSRTFKELSCC*GLE* A*TLVKPNKTPGAVT*AETKR*I*ATLQSRSAKE FRSPRNLRLTLRFKRNH*QPQKWKYQVSDFKCLASLNLYLLCIS MRVSFTKKPKSLDCPVIPRAILTLERAESTSLGVSLKKGSFDKGTKDRATCRIWWLMAPANLCSTENGELSQCDIPSEYGAL*RLKC LPSPNHELSITSS+SSSISSLRQENKNRCSKKSGVTSIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREPLRPQLI
Subject   1173  VSPEYVSEGCTVLHDLPSRTFKELSCC*GLE**A*TLVKPNKTPGAVT*AETKR*I*ATLQSRSAKEDFRSPRNLRLTLRFKRNH*QPQKWKYQVSDFKCLASLNLYLLCISLMRVSFTKKPKSLDCPVIPRAILTLERAESTSLGVSLKKGSFDKGTKDRATCRIWWLMAPANLCSTENGELSQCDIPSEYGAL*RLKCTLPSPNHELSITSSISSSISSLRQENKNRCSKKSGVTSIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREPLRPQLI  2063

Range 3: 1175 to 2059 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
638.9 bits(1388) 0.0 277/295(94%) 0/295(0%) Minus/Minus
Query        3  LQSMCRRAARIYMTCLPEHLRS*VVVEDWSNEHRP*SNPTRLQGL*PELKPNDKFEQHYNQGQQKRSFDRQEI*G*LFDSRETIDNHKNGNTK*VISSAWQVSTYTFSAFHL*GYHSLKSQKV*IAL*SQEPFLHLKEQNQPP*ELA*KRDHLTKGPRTEQHAEFGG*WHLQTYAQQRMES*ASAISLVNMEPSDD*SAHCQVQTMNYP*PPQCPLQSAH*GRRIKIGAQRNQGSHLSS*LKN*KAQERRQTSQVKFRGNLKTTWPRH*ASSDTKMISPALKYWASIGNHSAHN*  887
                LQSMCRRAAR YMTCLPEHLRS*VVVE WSNEHRP S+PTRLQGL*PELKPNDKFEQHYNQGQQ+R+FDRQEI*G*LFDSRETIDNHKNGNTK*VISSAWQVSTYTFSAFH *GYHSLKSQKV*IAL*SQEPFLHLKEQNQ P*ELA*K+DHLTKGPRTEQHAEFGG*WHLQTYAQQRM S*AS ISLVNMEPSD *SAHCQVQTMNYP*PPQ PLQSAH*GRRIKIGAQRNQGSHLSS* KN*K QERRQ SQVKFRGNLK  WPRH*ASSDTKMISPALKYWASIGNHSAHN*
Subject   1175  LQSMCRRAARFYMTCLPEHLRS*VVVEGWSNEHRPWSSPTRLQGL*PELKPNDKFEQHYNQGQQRRTFDRQEI*G*LFDSRETIDNHKNGNTK*VISSAWQVSTYTFSAFH**GYHSLKSQKV*IAL*SQEPFLHLKEQNQLP*ELA*KKDHLTKGPRTEQHAEFGG*WHLQTYAQQRMGS*ASVISLVNMEPSDG*SAHCQVQTMNYP*PPQYPLQSAH*GRRIKIGAQRNQGSHLSS*PKN*KVQERRQMSQVKFRGNLKIIWPRH*ASSDTKMISPALKYWASIGNHSAHN*  2059

Range 4: 1174 to 2064 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
617.4 bits(1341) 0.0 277/297(93%) 0/297(0%) Minus/Minus
Query        2  GFSRVCVGGLHGFT*LAFQNI*GVELLLRIGVTSIDLSQTQQDSRGCDLS*NQTINLSNITIKVSKRGLSIAKKSEVNSSIQEKPLTTTKMEIPSK*FQVLGKSQLIPSLHFIYEGIIH*KAKKFRLPCDPKSHSYT*KSRINLPRS*LKKGII*QRDQGQSNMQNLVVDGTCKLMLNREWRVKPVRYP**IWSPLTIKVRIAKSKP*TIHNLLNVLFNQLIEAGE*K*VLKEIRGHIYQVN*KIERLKSVDKRVK*SFAET*RQPGQGIRHHPTQK*YHQL*NIGHQ*GTTPPTTN  892
                G SRVCVGGLHGFT*LAFQNI*GVELLLR+GV SIDL Q QQDSRGCDLS*NQTINLSNITIKVSK GLSIAKK EVNSSIQEKPLTTTKMEIPSK*FQVLGKSQLIPSLHFI EGIIH*KAKKFRLPCDPKSHSYT*KSRIN PRS*LKK II*QRDQGQSNMQNLVVDGTCKLMLNREW VKPV YP**IWSPLT+KV IAKSKP*TIHNLLN+LFNQLIEAGE*K*VLKEIRGHIYQVN KIER KSVDK VK*SFAET*R  GQGIRHHPTQK*YHQL*NIGHQ*GTTPPTTN
Subject   1174  GLSRVCVGGLHGFT*LAFQNI*GVELLLRVGVMSIDLGQAQQDSRGCDLS*NQTINLSNITIKVSKGGLSIAKKFEVNSSIQEKPLTTTKMEIPSK*FQVLGKSQLIPSLHFINEGIIH*KAKKFRLPCDPKSHSYT*KSRINFPRS*LKKRII*QRDQGQSNMQNLVVDGTCKLMLNREWGVKPV*YP**IWSPLTVKVHIAKSKP*TIHNLLNILFNQLIEAGE*K*VLKEIRGHIYQVNRKIERFKSVDK*VK*SFAET*R*SGQGIRHHPTQK*YHQL*NIGHQ*GTTPPTTN  2064

Range 5: 1539 to 2069 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
360.8 bits(781) 0.0 166/177(94%) 0/177(0%) Plus/Plus
Query      367  *VCRCHQPPNSACCSVLGPFVK*SLF*ANS*GG*FCSFKCKNGSWDHRAI*TFWLFSE*YPHK*NAEKV*VETCQALEITYLVFPFLWLSMVSLESKS*PQISWRSKDLFC*P*L*CCSNLSFGFSSGHSPWSLVGFD*GLCXXXXXXXXXXXXKCSGRQVM*IRAALRHILWRNHS  897
                *VCRCHQPPNSACCSVLGPFVK*S F*ANS*G *FCSFKCKNGSWDHRAI*TFWLFSE*YPH *NAEKV*VETCQALEITYLVFPFLWLSMVSLESKS*PQISWRSK L C*P*L*CCSNLSFGFSSGHSPWSLVG D GLCSLLQ STTTQLLKCSGRQVM* RAALRHILWR+ S
Subject   1539  *VCRCHQPPNSACCSVLGPFVK*SFF*ANS*GS*FCSFKCKNGSWDHRAI*TFWLFSE*YPH**NAEKV*VETCQALEITYLVFPFLWLSMVSLESKS*PQISWRSKVLLC*P*L*CCSNLSFGFSSGHSPWSLVGLDQGLCSLLQPSTTTQLLKCSGRQVM*NRAALRHILWRDPS  2069

Range 6: 1173 to 1502 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
247.1 bits(533) 0.0 103/110(94%) 0/110(0%) Plus/Plus
Query        1  D*LWAEWFPIDAQYFKAGDIIFVSDDA*CLGQVVFKFPRNFT*LVCLRS*AFQFFS*LDRCDP*FL*APIFILLPQ*AD*RGH*GGYG*FMVWTWQCAL*SSEGSIFTRD  330
                D*LWAEWFPIDAQYFKAGDIIFVSDDA*CLGQ++FKFPRNFT*L+CLRS* FQFF *LDRCDP*FL*APIFILLPQ*AD*RG+*GGYG*FMVWTWQCAL* SEGSIFTRD
Subject   1173  D*LWAEWFPIDAQYFKAGDIIFVSDDA*CLGQIIFKFPRNFT*LICLRS*TFQFFG*LDRCDP*FL*APIFILLPQ*AD*RGY*GGYG*FMVWTWQCAL*PSEGSIFTRD  1502

Range 7: 1175 to 2068 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
577.5 bits(1254) 0.0 276/298(93%) 0/298(0%) Plus/Plus
Query        3  LVVGGVVPY*CPIFQSW*YHFCVG*CLMPWPGCLQVSAKXXXXXXXXXXXXXIFQLT**M*PLISLSTYFYSPASMS*LKRTLRRLWIVHGLDLAMRTLIVRGLHIH*GYRTGLTLHSLLSISLQVPSTTKFCMLLCPWSLCQMIPFXXXXXXXXXXXFQV*EWLLGSQGNLNFLAF**MIPS*MKCREGIS*DLPST*NHLLGISIFVVVNGFS*IEELTSDFLAIERPLLLTLIVMLLKFIVWFQLRSQPLESCWV*LRSMLVTPILNNNSTP*MFWKASHVNPCSPPTHTLEKPQ  896
                LVVGGVVPY*CPIFQSW*YHFCVG*CLMPWP  LQVSAKLHLT LSTLL+LSIF+LT**M*PLISLSTYFYSPASMS*LKR LRRLWIVHGLDLAM TL VRGLHIH*GY TGLT HSLLSISLQVPSTTKFCMLLCPWSLCQMI FLS*LLG+LILLFQV*EWLLGSQGNLNFLAF**MIPS MKCREGIS*DLPST*NHLLGISIFVVVNGFS*IEELTS+FLAIE P LLTLIVMLLKFIVWFQLRSQPLESCW * RSML+TP LNNNSTP*MFWKASHV PCSPPTHTLE+PQ
Subject   1175  LVVGGVVPY*CPIFQSW*YHFCVG*CLMPWPDYLQVSAKLHLTHLSTLLNLSIFRLT**M*PLISLSTYFYSPASMS*LKRILRRLWIVHGLDLAMCTLTVRGLHIH*GYHTGLTPHSLLSISLQVPSTTKFCMLLCPWSLCQMILFLS*LLGKLILLFQV*EWLLGSQGNLNFLAF**MIPSLMKCREGIS*DLPST*NHLLGISIFVVVNGFS*IEELTSNFLAIESPPLLTLIVMLLKFIVWFQLRSQPLESCWA*PRSMLITPTLNNNSTP*MFWKASHVKPCSPPTHTLERPQ  2068

Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome

Sequence ID: KR054734.1 Length: 8753 Number of Matches: 8

Range 1: 1174 to 2064 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
554.6 bits(1204) 0.0 243/297(82%) 0/297(0%) Plus/Plus
Query        2  ISCGRSGSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGNAHFNRQRAPYSLGISHWLNSPFSVEHKFAGAINHQILHVALSLVPLSNDPFFKLTPREVDSALSSVRMALGITGQSKLFGFLVNDTLINEMQRRYKLRLAKHLKSLTWYFHFCGCQWXXXXXXXXXXXXGDRKTSFADLDCNVAQIYRLVSAQVTAPGVLLGLTKVYARYSNPQQQLNSLNVLEGKSCKSVQPSDTYSGET  892
                ISCGRSGSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFV+ALEPFNFSVNLID+TPDFFEHLFLFSCLNELI EDIEE MD SWFGLGN HFNRQRAPYSLG+SHW+ SPFSVEHKFAG IN QIL+VALSLVPLS+DP FKLT REVDSALSSVR ALG+TGQSKLFGFLVN+TL NE+QR YKLRLA+HLKSLTW FHFCGCQWFLL RR+NL+FL DRK+SFAD DC VA+IY LV+AQ  AP VL GLTKVY+  SN QQ+L S N+LEG  C+SVQ  + + GET
Subject   1174  ISCGRSGSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVHALEPFNFSVNLIDITPDFFEHLFLFSCLNELIAEDIEEAMDGSWFGLGNLHFNRQRAPYSLGVSHWIKSPFSVEHKFAGVINRQILYVALSLVPLSDDPSFKLTSREVDSALSSVRKALGVTGQSKLFGFLVNNTLTNEVQRGYKLRLAQHLKSLTWLFHFCGCQWFLLCRRINLKFLSDRKSSFADPDCGVAKIYSLVTAQAIAPEVLSGLTKVYSFGSNSQQKLISSNILEGNLCESVQSPNAHFGET  2064

Range 2: 1173 to 2063 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
500.5 bits(1086) 0.0 239/297(80%) 0/297(0%) Minus/Minus
Query        1  VSPEYVSEGCTDLHDLPSRTFKELSCC*GLE*RA*TLVKPNKTPGAVT*AETKR*I*ATLQSRSAKEVFRSPRNLRLTLRFKRNH*QPQKWKYQVSDFKCLASLNLYLLCISFMRVSFTKKPKSLDCPVIPRAILTLERAESTSLGVSLKKGSFDKGTKDRATCRIWWLMAPANLCSTENGELSQCDIPSEYGAL*RLKCALPSPNHELXXXXXXXXXXXSLRQENKNRCSKKSGVTSIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREPLRPQLI  891
                VSP+     CTD H LPSR F+E+S C* LE + *TLVKP+KT GA+ *A TK *I AT QS SAKE FRS RNLRL LR +RNH*QPQK K QVSDFKC ASLNLY LC SF+RV FTKKPKS DCPV PRA LTLERAESTSL V+LK+GS D GTKDRAT RIW LM PANLCSTENG+L QCD P EYGAL*RLKC LPSPNHE SI SS+SS+ISSLRQENKNRCSKKSGV SIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREPLRPQLI
Subject   1173  VSPKCALGDCTDSHKLPSRIFEEMSFC*ELEPKE*TLVKPDKTSGAMA*AVTKL*ILATPQSGSAKEDFRSLRNLRLILRHRRNH*QPQK*KSQVSDFKC*ASLNLYPLCTSFVRVLFTKKPKSFDCPVTPRAFLTLERAESTSLEVNLKEGSSDNGTKDRATYRIWRLMTPANLCSTENGDLIQCDTPREYGAL*RLKCKLPSPNHEPSIASSISSAISSLRQENKNRCSKKSGVISIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREPLRPQLI  2063

Range 3: 1174 to 2064 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
451.5 bits(979) 0.0 212/297(71%) 0/297(0%) Minus/Minus
Query        2  GFSRVCVGGLHGFT*LAFQNI*GVELLLRIGVTSIDLSQTQQDSRGCDLS*NQTINLSNITIKVSKRGLSIAKKSEVNSSIQEKPLTTTKMEIPSK*FQVLGKSQLIPSLHFIYEGIIH*KAKKFRLPCDPKSHSYT*KSRINLPRS*LKKGII*QRDQGQSNMQNLVVDGTCKLMLNREWRVKPVRYP**IWSPLTIKVRIAKSKP*TIHNLLNVLFNQLIEAGE*K*VLKEIRGHIYQVN*KIERLKSVDKRVK*SFAET*RQPGQGIRHHPTQK*YHQL*NIGHQ*GTTPPTTN  892
                GFS+VCVGGLH FT + F+NI*  ELLLRIG   IDLS   Q+ RG  LS NQTI+ SN TI+VSK GLSI  K +V+SS Q+KPLTTT+M+ PSK*FQVL K  LIPSLH I E +IH*+AKK  LPC+PKS SYT*KS IN PRS LK+ II*Q DQGQSN+QNL V+ TCKL+LNREWR  PV +P* IW PLT+KV+IAKSKP* +H+ LN+L NQLIEAGE K*+LKEIRG+I QVN K+ERLKS++K VK*SFAET*RQPG GIRHH TQK*YHQL*NI HQ* TTPPTT+
Subject   1174  GFSKVCVGGLH*FTQITFKNI*RDELLLRIGAKRIDLS*A*QNLRGDGLSCNQTIDFSNTTIRVSKGGLSIT*KFKVDSSTQKKPLTTTEMKEPSK*FQVLSKP*LIPSLHLICESVIH*EAKKL*LPCNPKSLSYT*KSGINFPRSQLKRRII*QWDQGQSNIQNLAVNDTCKLVLNREWRFDPV*HP*GIWGPLTVKVQIAKSKP*AVHSFLNILCNQLIEAGEQK*MLKEIRGNINQVNRKVERLKSMNK*VK*SFAET*RQPG*GIRHHSTQK*YHQL*NIRHQ*RTTPPTTD  2064

Range 4: 1175 to 2068 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
423.1 bits(917) 0.0 204/298(68%) 0/298(0%) Minus/Minus
Query        3  LWFLQSMCRRAARIYMTCLPEHLRS*VVVEDWSNEHRP*SNPTRLQGL*PELKPNDKFEQHYNQGQQKRSFDRQEI*G*LFDSRETIDNHKNGNTK*VISSAWQVSTYTFSAFHL*GYHSLKSQKV*IAL*SQEPFLHLKEQNQPP*ELA*KRDHLTKGPRTEQHAEFGG*WHLQTYAQQRMES*ASAISLVNMEPSDD*SAHCQVQTMNYP*PPQCPLQSAH*GRRIKIGAQRNQGSHLSS*LKN*KAQERRQTSQVKFRGNLKTTWPRH*ASSDTKMISPALKYWASIGNHSAHN*  896
                L FLQS+    A I+   L E+L+ *  VE+WS ++RP* + T+ QG  PEL PN +F QH+NQGQQ+R+FD  EI*G* FD+ ETIDNH+N   K*VISS  Q  TYT SA HL*  +SL+SQK  IAL* QEPFLHLKE+NQ P*+  *K+DHLT GPRTEQH EFGG* HLQT AQQRME *+S   L NM PSD *SA+CQVQTM+ P* PQ PLQSAH*GRR KI AQRNQG + SS* K+*KAQE  Q SQVKFRGNLKTTW RH*AS DTKMISPALKY ASI NHSAHN*
Subject   1175  LGFLQSVRWGTALIHTNYLQEYLKR*ASVENWSQKNRP*LSLTKPQGRWPEL*PNYRF*QHHNQGQQRRTFDHLEI*G*FFDTEETIDNHRNERAK*VISSVEQALTYTLSAPHL*ECYSLRSQKALIAL*PQEPFLHLKERNQLP*KST*KKDHLTMGPRTEQHTEFGG**HLQTCAQQRMEI*SSVTPLGNMGPSDG*SANCQVQTMSRP*LPQYPLQSAH*GRRTKIDAQRNQG*YQSS*QKS*KAQEHEQMSQVKFRGNLKTTWLRH*ASFDTKMISPALKY*ASIENHSAHN*  2068

Range 5: 1542 to 2081 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
216.0 bits(465) 0.0 109/180(61%) 0/180(0%) Plus/Plus
Query      370  VCRCHQPPNSACCSVLGPFVK*SLF*ANS*GG*FCSFKCKNGSWDHRAI*TFWLFSE*YPHK*NAEKV*VETCQALEITYLVFPFLWLSMVSLESKS*PQISWRSKDLFC*P*L*CCSNLSFGFSSGHSPWSLVGFD*GLCXXXXXXXXXXXXKCSGRQVM*IRAALRHILWRNHSMTQT  909
                VCRCH PPNS CCSVLGP V+*S F* + *G *F SFKCK GSW +RAI  FWL SE*+ HK* AE+V*V+ C  LEITYL   FLWLSMVS  SK+ P IS  SK L C*P*L CC NL FG+SSGH P   V  +*GL   LQ ST   L K S R  +*I A  +  LWRN S +++
Subject   1542  VCRCH*PPNSVCCSVLGPIVR*SFF*VDF*GS*FRSFKCKKGSWGYRAIKAFWLLSE*HSHK*GAERV*VKACSTLEITYLALSFLWLSMVSSVSKNQP*ISK*SKVLLC*P*LWCC*NL*FGYSSGHRP*GFVRLN*GLFFWLQFSTEAHLFKYS*R*FV*ISAVPQRTLWRNPSQSRS  2081

Range 6: 1173 to 1499 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
184.8 bits(397) 0.0 85/109(78%) 0/109(0%) Plus/Plus
Query        1  D*LWAEWFPIDAQYFKAGDIIFVSDDA*CLGQVVFKFPRNFT*LVCLRS*AFQFFS*LDRCDP*FL*APIFILLPQ*AD*RGH*GGYG*FMVWTWQCAL*SSEGSIFTR  327
                D LWAEWF IDA YFKAGDIIFVS+DA*CL QVVFKFPRNFT*L+C  S*AFQ F *LD   P*FL*A IF+LLPQ*AD RG+*G YG  MVWTWQ AL* SEG IF R
Subject   1173  DQLWAEWFSIDA*YFKAGDIIFVSNDA*CLSQVVFKFPRNFT*LICSCS*AFQLFC*LD*YYP*FL*ASIFVLLPQ*ADCRGY*GSYGRLMVWTWQFAL*PSEGPIFPR  1499

Range 7: 1178 to 1609 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
217.8 bits(469) 0.0 111/144(77%) 0/144(0%) Plus/Plus
Query        6  VVGGVVPY*CPIFQSW*YHFCVG*CLMPWPGCLQVSAKXXXXXXXXXXXXXIFQLT**M*PLISLSTYFYSPASMS*LKRTLRRLWIVHGLDLAMRTLIVRGLHIH*GYRTGLTLHSLLSISLQVPSTTKFCMLLCPWSLCQMI  437
                VVGGVV Y*C IFQSW*YHFCV *CLMP PGCLQVSAKLHLT L  LLSLS F LT* + PLISLS YF SPASMS*L+R LR+LW  HGLDLA+ TL VRG HI *G  TG  LHSLLS SLQV  T KFCMLLCPWS CQMI
Subject   1178  VVGGVVLY*CLIFQSW*YHFCVE*CLMP*PGCLQVSAKLHLTHLFMLLSLSTFLLT*LILPLISLSIYFCSPASMS*LQRILRKLWTAHGLDLAICTLTVRGPHIP*GCHTGSNLHSLLSTSLQVSLTAKFCMLLCPWSHCQMI  1609

Range 8: 1649 to 2065 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
181.1 bits(389) 0.0 90/139(65%) 0/139(0%) Plus/Plus
Query      477  FQV*EWLLGSQGNLNFLAF**MIPS*MKCREGIS*DLPST*NHLLGISIFVVVNGFS*IEELTSDFLAIERPLLLTLIVMLLKFIVWFQLRSQPLESCWV*LRSMLVTPILNNNSTP*MFWKASHVNPCSPPTHTLEKP  893
                FQV*E LLG QGN +FLA **+  S M+CREGIS* L +T*NHLLG  I VVVNGF  +EE T +F  IE P LLTLIV+LLK IVW QLR  PL  C  *LRS+L+ PILN +S+  +F K   VN CSPPTHTLEKP
Subject   1649  FQV*ERLLGLQGNQSFLAS**ITLSQMRCREGIS*GLLNT*NHLLGSFISVVVNGFFCVEESTLNF*VIESPPLLTLIVVLLKSIVWLQLRPSPLRFCQA*LRSILLAPILNRSSSLQIFLKVICVNQCSPPTHTLEKP  2065

Grapevine rupestris stem pitting associated virus isolate VF1, partial genome

Sequence ID: KT948710.1 Length: 8716 Number of Matches: 9

Range 1: 1175 to 2065 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
610.9 bits(1327) 0.0 267/297(90%) 0/297(0%) Plus/Plus
Query        2  ISCGRSGSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGNAHFNRQRAPYSLGISHWLNSPFSVEHKFAGAINHQILHVALSLVPLSNDPFFKLTPREVDSALSSVRMALGITGQSKLFGFLVNDTLINEMQRRYKLRLAKHLKSLTWYFHFCGCQWXXXXXXXXXXXXGDRKTSFADLDCNVAQIYRLVSAQVTAPGVLLGLTKVYARYSNPQQQLNSLNVLEGKSCKSVQPSDTYSGET  892
                ISCGRSGSLLMPNISKLVISFLCRMMPN LARLSSSFRETSLDSFVYALEPFNFSVNLIDVTPDFFEHLFLFSC NELIEEDIEEVMDSSWFGLGN +FNRQRAPYSLG+SHWLNSPFSVE KFAGAINHQILHVAL+LVPL NDP FKL PREVDS LSSVRMALGITGQS+LFGFLVNDTLINE+QRRYKLRLA+HLKSLTWYFHFCGCQWFLLNRR NL+FLGDRK+SFADLDCNV QIYRLVSAQ TAPGVLLGLTKVY   SN QQ+LNSLN LEGKS +SVQPSD   GET
Subject   1175  ISCGRSGSLLMPNISKLVISFLCRMMPNVLARLSSSFRETSLDSFVYALEPFNFSVNLIDVTPDFFEHLFLFSCRNELIEEDIEEVMDSSWFGLGNVYFNRQRAPYSLGVSHWLNSPFSVESKFAGAINHQILHVALALVPLPNDPSFKLAPREVDSVLSSVRMALGITGQSRLFGFLVNDTLINELQRRYKLRLAQHLKSLTWYFHFCGCQWFLLNRRNNLKFLGDRKSSFADLDCNVTQIYRLVSAQATAPGVLLGLTKVYVCCSNTQQRLNSLNALEGKSSESVQPSDACFGET  2065

Range 2: 1174 to 2064 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
561.9 bits(1220) 0.0 261/297(88%) 0/297(0%) Minus/Minus
Query        1  VSPEYVSEGCTDLHDLPSRTFKELSCC*GLE*RA*TLVKPNKTPGAVT*AETKR*I*ATLQSRSAKEVFRSPRNLRLTLRFKRNH*QPQKWKYQVSDFKCLASLNLYLLCISFMRVSFTKKPKSLDCPVIPRAILTLERAESTSLGVSLKKGSFDKGTKDRATCRIWWLMAPANLCSTENGELSQCDIPSEYGAL*RLKCALPSPNHELXXXXXXXXXXXSLRQENKNRCSKKSGVTSIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREPLRPQLI  891
                VSP++ SEGCTD  DLPSR FKELS C* LE + *TLVKPNKTPGAV *AET+R*I  TLQSRSAKE FRSP+NLRL LRFKRNH QPQK KYQVSDFKC ASLNLYLLC SFMRVSFTKKPKSLDCPVIPRAILTLER ESTSLG SLK+GSF KGTK RATC+IWWLMAPANL STENGELSQCD PSEYGAL*RLK  LPSPNHELSITSSMSSSISSLRQENKNRCSKKSGVTSIKLTEKLKGSRA*TNESSEVSRKLED+LA+ LGIIRHKNDITSFE+LGINREPLRPQLI
Subject   1174  VSPKHASEGCTDSLDLPSRAFKELSLC*VLEQQT*TLVKPNKTPGAVA*AETRR*IWVTLQSRSAKEDFRSPKNLRLFLRFKRNHWQPQK*KYQVSDFKCCASLNLYLLCNSFMRVSFTKKPKSLDCPVIPRAILTLERTESTSLGASLKEGSFGKGTKARATCKIWWLMAPANLLSTENGELSQCDTPSEYGAL*RLKYTLPSPNHELSITSSMSSSISSLRQENKNRCSKKSGVTSIKLTEKLKGSRA*TNESSEVSRKLEDSLARTLGIIRHKNDITSFEMLGINREPLRPQLI  2064

Range 3: 1176 to 2060 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
503.3 bits(1092) 0.0 227/295(77%) 0/295(0%) Minus/Minus
Query        3  LQSMCRRAARIYMTCLPEHLRS*VVVEDWSNEHRP*SNPTRLQGL*PELKPNDKFEQHYNQGQQKRSFDRQEI*G*LFDSRETIDNHKNGNTK*VISSAWQVSTYTFSAFHL*GYHSLKSQKV*IAL*SQEPFLHLKEQNQPP*ELA*KRDHLTKGPRTEQHAEFGG*WHLQTYAQQRMES*ASAISLVNMEPSDD*SAHCQVQTMNYP*PPQCPLQSAH*GRRIKIGAQRNQGSHLSS*LKN*KAQERRQTSQVKFRGNLKTTWPRH*ASSDTKMISPALKYWASIGNHSAHN*  887
                LQSM  RAA I++TCL E  RS*V VE WSN+HRP* NP +LQGL PELKP+DKF  H NQGQQ+R+FDR +I*G  F SRET  NH+N NTK*VISSA QVSTYTFSA HL*G HSLKSQK *IAL*SQEPF  LKE+NQ P* LA*++DHL KGPR EQHA+FGG*WHLQT +QQRMES*A+ I LVNMEPSD *S HC VQTMNYP PPQCP QSAH GRR KIGAQRNQGSHLSS*L+N*K QE RQ +QVKF GNLKT W  H AS DTKMISPALK WASIGNHSAHN*
Subject   1176  LQSMHLRAALIHLTCLQERSRS*VFVECWSNKHRP*LNPIKLQGLWPELKPDDKFG*HCNQGQQRRTFDRPKI*GCFFGSRETTGNHRNENTK*VISSAVQVSTYTFSATHL*GCHSLKSQKA*IAL*SQEPFSRLKERNQLP*GLA*RKDHLAKGPRPEQHAKFGG*WHLQTCSQQRMES*ANVIPLVNMEPSDG*STHCLVQTMNYPLPPQCPPQSAHCGRRTKIGAQRNQGSHLSS*LRN*KVQEHRQMNQVKFHGNLKTAWLGHWASFDTKMISPALKCWASIGNHSAHN*  2060

Range 4: 1175 to 2059 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
501.9 bits(1089) 0.0 228/295(77%) 0/295(0%) Minus/Minus
Query        2  SRVCVGGLHGFT*LAFQNI*GVELLLRIGVTSIDLSQTQQDSRGCDLS*NQTINLSNITIKVSKRGLSIAKKSEVNSSIQEKPLTTTKMEIPSK*FQVLGKSQLIPSLHFIYEGIIH*KAKKFRLPCDPKSHSYT*KSRINLPRS*LKKGII*QRDQGQSNMQNLVVDGTCKLMLNREWRVKPVRYP**IWSPLTIKVRIAKSKP*TIHNLLNVLFNQLIEAGE*K*VLKEIRGHIYQVN*KIERLKSVDKRVK*SFAET*RQPGQGIRHHPTQK*YHQL*NIGHQ*GTTPPTTN  886
                S+ C+ GLH FT*LAF+++ GV+ LL +G T+IDLS TQ +SRGC LS*NQTINL NI IKVSK GLSIA+K EV SS+QEKPL TT+M+IPS+*FQVL KSQLIPSL  IYEG+IH*KAKK RLPCDPKSHS+ *K+ IN PR *L+  II QRDQGQSNMQNLVVDGTCKL LNREWRVKP+ YP**IWSPLT+KV IA SKP*TIH LLNVL NQLI AGE K*VLKEIRGHIYQVN*+IER KS+DK +K*SF ET*RQPG  I HH TQK*YHQL*N+GHQ*GTTPPTT+
Subject   1175  SKACI*GLH*FT*LAFKSVQGVKSLLSVGATNIDLS*TQ*NSRGCGLS*NQTINLGNIAIKVSKGGLSIAQKFEVVSSVQEKPLATTEMKIPSE*FQVLCKSQLIPSLQLIYEGVIH*KAKKPRLPCDPKSHSHA*KNGINFPRG*LEGRIIWQRDQGQSNMQNLVVDGTCKLALNREWRVKPM*YP**IWSPLTVKVHIA*SKP*TIHYLLNVLLNQLIAAGEQK*VLKEIRGHIYQVN*EIERFKSIDK*IK*SFTET*RQPG*DIGHHSTQK*YHQL*NVGHQ*GTTPPTTD  2059

Range 5: 1179 to 1610 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
247.6 bits(534) 0.0 121/144(84%) 0/144(0%) Plus/Plus
Query        6  VVGGVVPY*CPIFQSW*YHFCVG*CLMPWPGCLQVSAKXXXXXXXXXXXXXIFQLT**M*PLISLSTYFYSPASMS*LKRTLRRLWIVHGLDLAMRTLIVRGLHIH*GYRTGLTLHSLLSISLQVPSTTKFCMLLCPWSLCQMI  437
                VVGGVVPY*CP FQSW*YHFCV *C M  PGCLQVS KLHL  LS LL+LSI QLT**M*PLISLSTYF SPA+MS*L+RTLRR WIVHGLD AM TL VRGLHIH*GY  GLTLHSLL  SLQVPSTTKFCMLL PWSLCQMI
Subject   1179  VVGGVVPY*CPTFQSW*YHFCVE*CPMS*PGCLQVSVKLHLIHLSMLLNLSISQLT**M*PLISLSTYFCSPAAMS*LRRTLRR*WIVHGLD*AMCTLTVRGLHIH*GYHIGLTLHSLLRASLQVPSTTKFCMLLWPWSLCQMI  1610

Range 6: 1650 to 2063 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
216.9 bits(467) 0.0 102/138(74%) 0/138(0%) Plus/Plus
Query      477  FQV*EWLLGSQGNLNFLAF**MIPS*MKCREGIS*DLPST*NHLLGISIFVVVNGFS*IEELTSDFLAIERPLLLTLIVMLLKFIVWFQLRSQPLESCWV*LRSMLVTPILNNNSTP*MFWKASHVNPCSPPTHTLEK  890
                FQ *EWLLGSQGNL FLAF**M PS*M CREGIS*DL ST*NH LGI I VV +GFS* EE TS+F AIE P LLTLI ML KFIVWFQLR QPLE  WV*LRSM V P LN + TP*   KAS VN CSP  H LE+
Subject   1650  FQA*EWLLGSQGNLGFLAF**MTPS*MSCREGIS*DLHST*NHSLGIFISVVASGFS*TEETTSNFWAIESPPLLTLIAMLPKFIVWFQLRPQPLEFYWV*LRSMFVAPTLNKDLTP*TLLKASQVNQCSPQMHALER  2063

Range 7: 1543 to 1965 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
245.3 bits(529) 0.0 107/141(76%) 0/141(0%) Plus/Plus
Query      370  VCRCHQPPNSACCSVLGPFVK*SLF*ANS*GG*FCSFKCKNGSWDHRAI*TFWLFSE*YPHK*NAEKV*VETCQALEITYLVFPFLWLSMVSLESKS*PQISWRSKDLFC*P*L*CCSNLSFGFSSGHSPWSLVGFD*GLC  792
                VCRCHQPPN ACCS LGPF K*S   A+ *G *F SFK +NGSWDHRAI* FWLFSE*+PHK* AEKV*VETC ALEIT+LVF FLWL +VSLE K  PQI  RSK L C*P*L C  NLS GFSSGHSPWS +GF+*GLC
Subject   1543  VCRCHQPPNFACCSGLGPFAK*SFLQASP*GS*FRSFKRENGSWDHRAI*AFWLFSE*HPHK*VAEKV*VETCTALEITHLVFSFLWLPVVSLEPKKQPQIFGRSKVLLC*P*LQCYPNLSSGFSSGHSPWSFIGFN*GLC  1965

Range 8: 1174 to 1500 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
204.5 bits(440) 0.0 90/109(83%) 0/109(0%) Plus/Plus
Query        1  D*LWAEWFPIDAQYFKAGDIIFVSDDA*CLGQVVFKFPRNFT*LVCLRS*AFQFFS*LDRCDP*FL*APIFILLPQ*AD*RGH*GGYG*FMVWTWQCAL*SSEGSIFTR  327
                D LWAEWFPIDAQ+FKAGDIIFVS+DA C  Q VFKFP NFT* +CL S* FQF S*LDRCDP*FL*APIF+LLPQ*AD* GH*GG G*FMVWT QC L* SEGSIFTR
Subject   1174  DQLWAEWFPIDAQHFKAGDIIFVSNDAQCPSQAVFKFP*NFT*FICLCS*TFQFLS*LDRCDP*FL*APIFVLLPQ*AD*GGH*GGNG*FMVWTRQCVL*PSEGSIFTR  1500

Range 9: 2014 to 2070 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.6 bits(56) 0.0 13/19(68%) 0/19(0%) Plus/Plus
Query      841  RQVM*IRAALRHILWRNHS  897
                RQV *I AALR +LWR+ S
Subject   2014  RQVK*ISAALRCMLWRDSS  2070

Grapevine rupestris stem pitting associated virus isolate GRSPaV LSL, complete genome

Sequence ID: KR054735.1 Length: 8754 Number of Matches: 10

Range 1: 1174 to 2058 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
440.5 bits(955) 0.0 192/295(65%) 0/295(0%) Plus/Plus
Query        2  ISCGRSGSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGNAHFNRQRAPYSLGISHWLNSPFSVEHKFAGAINHQILHVALSLVPLSNDPFFKLTPREVDSALSSVRMALGITGQSKLFGFLVNDTLINEMQRRYKLRLAKHLKSLTWYFHFCGCQWXXXXXXXXXXXXGDRKTSFADLDCNVAQIYRLVSAQVTAPGVLLGLTKVYARYSNPQQQLNSLNVLEGKSCKSVQPSDTYSG  886
                ISCGRSGSL+MPNI KL+ISFLCRMMPN LARLSSSFRE+SLDSFVY+LEPFNFS+NL+D+T +FFEH+FLFSC NELIEE++EEVMD+SWFGLGNAHFNR++ P+S G   WLNS FSVEHKF G +N+QILH  LSL+PL NDP FK + RE+DSALS V+ AL ITGQSKLF F+V+DTL+  +Q  Y+ RL+ H+K+LT +FH CG QWFLL RR NLRFL DRK+SFADL C VA+IY LV AQVT P    GL +VY  +S   +  N      G++  S++  +  SG
Subject   1174  ISCGRSGSLIMPNIHKLIISFLCRMMPNVLARLSSSFRESSLDSFVYSLEPFNFSINLVDITAEFFEHMFLFSCRNELIEENVEEVMDNSWFGLGNAHFNRRQNPFSFGRDFWLNSKFSVEHKFPGIVNNQILHAVLSLIPLPNDPKFKPSGREIDSALSRVKAALAITGQSKLFRFVVDDTLLRSVQSAYRFRLSSHIKALTEFFHICGLQWFLLCRRANLRFLCDRKSSFADLSCQVAKIYNLVVAQVTLPNASSGLIQVYIDHSRSNKNSNPHFAATGEARDSIEAVNLDSG  2058

Range 2: 1173 to 1973 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
302.1 bits(653) 0.0 162/267(61%) 0/267(0%) Minus/Minus
Query        1  E*RA*TLVKPNKTPGAVT*AETKR*I*ATLQSRSAKEVFRSPRNLRLTLRFKRNH*QPQKWKYQVSDFKCLASLNLYLLCISFMRVSFTKKPKSLDCPVIPRAILTLERAESTSLGVSLKKGSFDKGTKDRATCRIWWLMAPANLCSTENGELSQCDIPSEYGAL*RLKCALPSPNHELXXXXXXXXXXXSLRQENKNRCSKKSGVTSIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREPLRPQLI  801
                E*  *T +KP+   G VT A TK *I AT Q RSAKE FRS RNLRL LR +RNH*+PQ WK  V  F C  SL  Y LC    RVS T   KSLDCPVI +A LT + AES SL   L  GS   G  D   C I  L  P NLCSTEN ELSQ  +P E G   RLKCALPSPN ELSITSS  SSI+SLRQEN+N CSK S V S KL EKLKGSR  TNES+E S KLED+LA+  GII  +N+I S  +LGI +EPLRPQLI
Subject   1173  E*SM*T*IKPDDALGNVTCATTKL*IFAT*QERSAKEDFRSHRNLRLALRQRRNH*RPQMWKNSVRAFMCEESLKRYALCTLRRRVSSTTNLKSLDCPVIAKAALTRDSAESISLPEGLNLGSLGNGINDNTACSI*LLTIPGNLCSTENLELSQKSLPKENGFCRRLKCALPSPNQELSITSSTFSSINSLRQENRNICSKNSAVMSTKLIEKLKGSREYTNESNEDSLKLEDSLARTFGIILQRNEIMSL*MLGIIKEPLRPQLI  1973

Range 3: 1174 to 1488 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
100.5 bits(213) 0.0 49/105(47%) 0/105(0%) Minus/Minus
Query        2  WSPLTIKVRIAKSKP*TIHNLLNVLFNQLIEAGE*K*VLKEIRGHIYQVN*KIERLKSVDKRVK*SFAET*RQPGQGIRHHPTQK*YHQL*NIGHQ*GTTPPTTN  316
                W    I++RI   KP  +H   NVL + LI AG+ + + K++  ++  +N*K+ERLK + KRV * F ET*R PGQ I HH T++* ++L N+GH   TT PTTN
Subject   1174  WVLSAIEMRIT*PKPRIVHYFFNVLLD*LIAAGKQEHMFKKLSRNVN*IN*KVERLKGIHKRV**RFPET*R*PGQNIWHHSTEE*DNELVNVGHYQRTTSPTTN  1488

Range 4: 1666 to 1995 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.8 bits(194) 0.0 45/110(41%) 0/110(0%) Minus/Minus
Query      494  VELLLRIGVTSIDLSQTQQDSRGCDLS*NQTINLSNITIKVSKRGLSIAKKSEVNSSIQEKPLTTTKMEIPSK*FQVLGKSQLIPSLHFIYEGIIH*KAKKFRLPCDPKS  823
                + +L+R GV +++L+QT    R C+L  NQ INL ++T KV K GLS+ +K E+ S  ++KPL TT +E  S+   V G+ + I +LH   +G+IH K +K  L C+ +S
Subject   1666  IGILVRAGVINVNLNQT**CIR*CNLCYNQVINLRHLTGKVGKGGLSVTQKPEIGSPAEKKPLKTTNVEKFSEGLYV*GEPKTICTLHATQKGVIHHKPEKLGLSCNCQS  1995

Range 5: 1173 to 1493 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.9 bits(155) 0.0 45/107(42%) 0/107(0%) Plus/Plus
Query        1  D*LWAEWFPIDAQYFKAGDIIFVSDDA*CLGQVVFKFPRNFT*LVCLRS*AFQFFS*LDRCDP*FL*APIFILLPQ*AD*RGH*GGYG*FMVWTWQCAL*SSEGSIF  321
                D*LWA+WF  +AQ+ +A  +I + +DA C GQ +FKF   F  LVC+  *AFQ F+*      *  *  + + LPQ* +    *   G F+VW   CA  S    IF
Subject   1173  D*LWAKWFFDNAQHSQAHYLIPL*NDAKCSGQAIFKFQGIFIRLVCVFP*AFQLFN*FS*HYG*VF*TYVPVFLPQ*VNRGER*RSNGQFLVWAR*CAFQSPTKPIF  1493

Range 6: 1679 to 1981 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.6 bits(102) 0.0 37/101(37%) 0/101(0%) Plus/Plus
Query      507  QGNLNFLAF**MIPS*MKCREGIS*DLPST*NHLLGISIFVVVNGFS*IEELTSDFLAIERPLLLTLIVMLLKFIVWFQLRSQPLESCWV*LRSMLVTPIL  809
                Q N +F     M P  + CR  I    P T*   L  S FVV +GF    E  S F   E P L T  V   +FI W   R   L    V* +  L+TP L
Subject   1679  QDNPSFSGLWWMTPFCVACRVHIVLGSPHT*RPSLNFSTFVVFSGFFSAGEPISGFCVTESPPLPTFPVRWRRFITWL*HRLHYLMHHQV*FKFTLITPAL  1981

Range 7: 1175 to 1609 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
87.2 bits(184) 0.0 58/145(40%) 0/145(0%) Minus/Minus
Query        3  DHLTKGPRTEQHAEFGG*WHLQTYAQQRMES*ASAISLVNMEPSDD*SAHCQVQTMNYP*PPQCPLQSAH*GRRIKIGAQRNQGSHLSS*LKN*KAQERRQTSQVKFRGNLKTTWPRH*ASSDTKMISPALKYWASIGNHSAHN*  437
                DH   G  T  HA F  * +L+ Y Q++  S*A  +    M    D*+AH   QT N P   Q   +  H GR+     Q+ Q     +*LK+*KAQ   QTS +K   NLK  WP H AS    M   A + WA   NH AHN*
Subject   1175  DH*VMGSMTTPHAVFDC*QYLEIYVQRKTWS*AKNLFQKKMGFVGD*NAHYLAQTKNCPLLLQRSPRLTHCGRKTGTYVQKTQP*CQLN*LKS*KAQGNTQTSLMKIP*NLKIAWPEHLASFYRGMR**ACECWALSKNHFAHN*  1609

Range 8: 1175 to 1285 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
43.2 bits(88) 0.0 23/37(62%) 0/37(0%) Plus/Plus
Query        3  LVVGGVVPY*CPIFQSW*YHFCVG*CLMPWPGCLQVS  113
                LVVG VV  *CP F S   H  V *C M WPG LQVS
Subject   1175  LVVGEVVL**CPTFTSSLSHSSVE*CQMFWPGYLQVS  1285

Range 9: 1785 to 1952 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.9 bits(72) 0.0 21/56(38%) 0/56(0%) Plus/Plus
Query      613  VFPFLWLSMVSLESKS*PQISWRSKDLFC*P*L*CCSNLSFGFSSGHSPWSLVGFD  780
                +FP LW S+VS   +S  Q+S   K L C P L    +L  G S+G+    ++ FD
Subject   1785  IFPHLWSSVVSSLPESQSQVSV*PKVLLCRPFLSGGEDL*LGCSTGYIT*CIIRFD  1952

Range 10: 1391 to 1489 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
32.7 bits(65) 0.0 15/33(45%) 0/33(0%) Plus/Plus
Query      219  PASMS*LKRTLRRLWIVHGLDLAMRTLIVRGLH  317
                PA+MS* +RTL++ W + GL   MR  I    H
Subject   1391  PAAMS*SRRTLKK*WTILGLG*VMRISIADKTH  1489

Rupestris stem pitting associated virus isolate RSPaV PN, complete genome

Sequence ID: AY368172.2 Length: 8743 Number of Matches: 10

Range 1: 1174 to 2037 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
500.1 bits(1085) 0.0 213/288(74%) 0/288(0%) Plus/Plus
Query        2  ISCGRSGSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGNAHFNRQRAPYSLGISHWLNSPFSVEHKFAGAINHQILHVALSLVPLSNDPFFKLTPREVDSALSSVRMALGITGQSKLFGFLVNDTLINEMQRRYKLRLAKHLKSLTWYFHFCGCQWXXXXXXXXXXXXGDRKTSFADLDCNVAQIYRLVSAQVTAPGVLLGLTKVYARYSNPQQQLNSLNVLEGKSCKSVQ  865
                I CGRSGSLLMPNISKLV SF CRMMPNALARLSSSFRE+SLDSFVYALEPFNF+VNLIDVTPDFFEHLFLFSCLNEL+EE+IEEVMD+SWFGL N HFNRQRAPYSLG SHWL+SPFSVEHKF G +NHQIL VALSL+PL NDP F+ T  E++ +L S+RMAL  T QSKLFGFLVN  LI+EMQ++YK +LA+HLK+LTW+FHFCG QWFLL++R NL+FLG+ K+SFADLDCNVA++Y LV  Q  AP  L GL KVY   SNPQQ+ N   + +G+SC+ VQ
Subject   1174  IGCGRSGSLLMPNISKLVTSFFCRMMPNALARLSSSFRESSLDSFVYALEPFNFAVNLIDVTPDFFEHLFLFSCLNELMEENIEEVMDNSWFGLSNVHFNRQRAPYSLGTSHWLSSPFSVEHKFTGIVNHQILQVALSLIPLPNDPAFRPTSEEINFSLLSIRMALESTRQSKLFGFLVNSALISEMQKKYKTKLAQHLKALTWFFHFCGLQWFLLSKRANLKFLGECKSSFADLDCNVAKLYNLVITQAIAPRALSGLIKVYVGSSNPQQKSNPQTIFDGESCELVQ  2037

Range 2: 1173 to 2036 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
407.0 bits(882) 0.0 202/288(70%) 0/288(0%) Minus/Minus
Query        1  CTDLHDLPSRTFKELSCC*GLE*RA*TLVKPNKTPGAVT*AETKR*I*ATLQSRSAKEVFRSPRNLRLTLRFKRNH*QPQKWKYQVSDFKCLASLNLYLLCISFMRVSFTKKPKSLDCPVIPRAILTLERAESTSLGVSLKKGSFDKGTKDRATCRIWWLMAPANLCSTENGELSQCDIPSEYGAL*RLKCALPSPNHELXXXXXXXXXXXSLRQENKNRCSKKSGVTSIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREPLRPQLI  864
                CT+ HD PS+    L  C GLE   *TL+KP+K  GA+ *  TK *  ATLQSRSAKE   SP+NLRL L   RNH*+PQK K QVS FKC AS  LY  CIS MR  FTKKPKS DC V  RAIL L+R +  S  V L  GSF  G KDRATC+I  L  P NLCSTE GELSQC++PSEYGAL RLK  L SPNHELSITSS+ SSI+SLRQENKNRCSKKSGVTSIK T KLKGSRA*TNESSE SRKLED+LAKALGIIR KND+TSFEILGINREPLRPQ I
Subject   1173  CTNSHDSPSKMVWGLDFCWGLELPT*TLIKPDKALGAIA*VITKL*SLATLQSRSAKEDLHSPKNLRLALLLSRNH*RPQK*KNQVSAFKCWASFVLYFFCISLMRALFTKKPKSFDCLVDSRAILMLKREKLISSEVGLNAGSFGSGIKDRATCKI**LTIPVNLCSTEKGELSQCEVPSEYGALWRLK*TLLSPNHELSITSSIFSSINSLRQENKNRCSKKSGVTSIKFTAKLKGSRA*TNESSEDSRKLEDSLAKALGIIRQKNDVTSFEILGINREPLRPQPI  2036

Range 3: 1174 to 2049 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
281.5 bits(608) 0.0 143/292(49%) 0/292(0%) Minus/Minus
Query        2  CVGGLHGFT*LAFQNI*GVELLLRIGVTSIDLSQTQQDSRGCDLS*NQTINLSNITIKVSKRGLSIAKKSEVNSSIQEKPLTTTKMEIPSK*FQVLGKSQLIPSLHFIYEGIIH*KAKKFRLPCDPKSHSYT*KSRINLPRS*LKKGII*QRDQGQSNMQNLVVDGTCKLMLNREWRVKPVRYP**IWSPLTIKVRIAKSKP*TIHNLLNVLFNQLIEAGE*K*VLKEIRGHIYQVN*KIERLKSVDKRVK*SFAET*RQPGQGIRHHPTQK*YHQL*NIGHQ*GTTPPTTN  877
                C+  L+ FT* A +N  GV  LL I   +ID + T   SR   LS NQ +   ++ IK+ K GL+  +K EV+S   ++PL T +M+ PS+ FQVLG+ +L+  LH  YEG +H +AK+F LP   +SH Y *+ +INL R   +  II Q +QG SN+QNL+++   KLMLNR+ R +PV    *IWSPL I+V IAKS+P* IHNLLN+  +Q IEAGE K*+LK++RG+I Q+  K++R KS+D+ VK* F +T*      +RHH  +K* + L*NIGH * TTPPT N
Subject   1174  CMERLYQFT*FAIKNGLGVRFLLGIRTANIDFN*T**SSRRNSLSYNQIVEFGDVAIKICKGGLTFTQKFEVSSLT*QEPLKTAEMKKPSECFQVLGEFRLVFFLHLTYEGAVHQEAKEF*LPRGLESHPYA*EGKINLLRGWPECRIIWQWNQG*SNLQNLMINNPRKLMLNRKGRAEPV*SSQ*IWSPLAIEVNIAKSEP*IIHNLLNIFLHQFIEAGEQK*MLKKVRGNINQIYCKVKRFKSIDE*VK*RFTKT*G*SS*SVRHHSAEK*RN*L*NIGH**RTTPPTAN  2049

Range 4: 1178 to 2059 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
244.4 bits(527) 0.0 142/294(48%) 0/294(0%) Minus/Minus
Query        6  LQSMCRRAARIYMTCLPEHLRS*VVVEDWSNEHRP*SNPTRLQGL*PELKPNDKFEQHYNQGQQKRSFDRQEI*G*LFDSRETIDNHKNGNTK*VISSAWQVSTYTFSAFHL*GYHSLKSQKV*IAL*SQEPFLHLKEQNQPP*ELA*KRDHLTKGPRTEQHAEFGG*WHLQTYAQQRMES*ASAISLVNMEPSDD*SAHCQVQTMNYP*PPQCPLQSAH*GRRIKIGAQRNQGSHLSS*LKN*KAQERRQTSQVKFRGNLKTTWPRH*ASSDTKMISPALKYWASIGNHSAHN  887
                LQ +  +   I+M    +    *+   D + +HR * N  +L   *PEL PN +  +  NQ  Q+R++   +I*G*L     TI++ +N  TK*V+SSA +VS+  FSA HL*G  S +SQ+V IA  ++EP L L+ +N  P  LA* +DHL    R EQ A+F  *    TYAQQ+ ES*AS    VNMEP  D*S HC V+TMNYP*PPQ    S H*GRR KI AQ++QG H S+ L++*K QE R+ SQVK   NL+    + *AS   KM   ALKYWA I NHSAH+
Subject   1178  LQCLHGKTVPIHMIRHQKWFGG*ISAGD*NCQHRL*LNLIKL*AQ*PEL*PNCRVWRRCNQDLQRRTYIHPKI*G*LSYLAGTIEDRRNEKTK*VLSSAGRVSSCIFSASHL*GRCSPRSQRVLIASWTREPSLCLRGKN*SPQRLA*MQDHLAVESRIEQPAKFDD*QSP*TYAQQKRES*ASVKFPVNMEPFGD*SEHC*VRTMNYP*PPQYFPPSIH*GRRTKIDAQKSQG*HQSNLLQS*KVQEHRRMSQVKIHENLRIV*LKR*ASFGRKMT*LALKYWALIENHSAHS  2059

Range 5: 1179 to 1496 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
120.2 bits(256) 0.0 62/106(58%) 0/106(0%) Plus/Plus
Query        7  LWAEWFPIDAQYFKAGDIIFVSDDA*CLGQVVFKFPRNFT*LVCLRS*AFQFFS*LDRCDP*FL*APIFILLPQ*AD*RGH*GGYG*FMVWTWQCAL*SSEGSIFT  324
                LWAEWF I+AQYFKA  +IF+ +DA*     + KF   FT*L+ L S* F   S  D C P*  *A IF+LLPQ* D   +*GGYG*FMV T QC+L S +GSIFT
Subject   1179  LWAEWFSINAQYFKASYVIFLPNDA*RFS*TILKFS*IFT*LIRLCS*TF*LCSKFD*CYP*LF*ASIFVLLPQ*IDGGKY*GGYG*FMVRT*QCSLQSPKGSIFT  1496

Range 6: 1566 to 1844 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.4 bits(191) 0.0 51/93(55%) 0/93(0%) Plus/Plus
Query      394  NSACCSVLGPFVK*SLF*ANS*GG*FCSFKCKNGSWDHRAI*TFWLFSE*YPHK*NAEKV*VETCQALEITYLVFPFLWLSMVSLESKS*PQI  672
                N A CS+L    K*S   AN *G *F   K K+GS  H AI T WL  E  PHK*+AEK+  ET  ALE T+LVF FL  SMV  + +S*PQI
Subject   1566  NFAGCSILDSTAK*SCIQANL*GD*FFPLKHKDGSRVHEAIKTLWLLGEQRPHK*DAEKIQDETRPALESTHLVFSFLRSSMVPAK*ES*PQI  1844

Range 7: 1863 to 1964 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.1 bits(55) 0.0 14/34(41%) 0/34(0%) Plus/Plus
Query      691  LFC*P*L*CCSNLSFGFSSGHSPWSLVGFD*GLC  792
                L C  *L     L FG++SG+   S + F+* LC
Subject   1863  LLCRS*LQRRQTLQFGYNSGYCA*SFIRFN*SLC  1964

Range 8: 1352 to 1609 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
103.7 bits(220) 0.0 51/86(59%) 0/86(0%) Plus/Plus
Query      180  M*PLISLSTYFYSPASMS*LKRTLRRLWIVHGLDLAMRTLIVRGLHIH*GYRTGLTLHSLLSISLQVPSTTKFCMLLCPWSLCQMI  437
                M PL  LS YF SPASM+* ++ LRRLWI+HG DLAM T I +GLHIH    TG  L  LLSISL+     KFC LL P   CQMI
Subject   1352  MLPLTFLSIYFCSPASMN*WRKILRRLWIIHGSDLAMFTSIAKGLHIHWELHTGSALPFLLSISLRGLLIIKFCRLLYP*FHCQMI  1609

Range 9: 1664 to 2029 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.7 bits(196) 0.0 54/122(44%) 0/122(0%) Plus/Plus
Query      492  WLLGSQGNLNFLAF**MIPS*MKCREGIS*DLPST*NHLLGISIFVVVNGFS*IEELTSDFLAIERPLLLTLIVMLLKFIVWFQLRSQPLESCWV*LRSMLVTPILNNNSTP*MFWKASHVN  857
                WL   +GN N LA  *  PS*++CR+    + PST* H LG  I  V NG  *+ ELTS+F     P L  LI       +W  LR   LE   V*L+SML   I + N TP  F  A+HVN
Subject   1664  WLSSPRGNQNSLASW*TAPS*VRCRKNTRRNSPST*KHSLGFFISAVFNGSC*VRELTSNFWVNVSPPLQILIATSPNSTIWL*LRLLRLELYQV*LKSMLAVLIPSRNLTPKPFLMANHVN  2029

Range 10: 1175 to 1255 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.9 bits(83) 0.0 19/27(70%) 0/27(0%) Plus/Plus
Query        3  LVVGGVVPY*CPIFQSW*YHFCVG*CL  83
                L VGGVV Y*CPIFQS   HF   *CL
Subject   1175  LAVGGVVLY*CPIFQS*LRHFSAE*CL  1255

Nucleotide Sequence (714 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 33 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
72
144
216
288
360
432
504
576
648
714

Descriptions

Alignments

Grapevine rupestris stem pitting associated virus isolate SK704 A, complete genome

Sequence ID: KX274274.1 Length: 8725 Number of Matches: 8

Range 1: 5078 to 5758 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
545.0 bits(1183) 0.0 220/227(97%) 0/227(0%) Minus/Minus
Query       32  KQRVESRPKFAQP*PPLIYCQILYNVGIS*KSKQHLAANPDMTCLSDFQWLQHFC*PSLPQTPALPHETY*HCG*HSMGLLIGKCRAGIFRKALHALASQLPPVALKTSSVFGRPSKK*WSHYPYV*DKCSQNAHKHCSIAHPCPPCVHRRIAELSHTHTVPHDTLSKPFSQPI*PWLTPDCSRVCVF*TILHLNTQTRALQLHSLHPGLRKA*LLATDHHTAFPLV  712
                KQRVESRPKFAQP*PPLIYCQILYNVGIS*K KQHLAANPDMTCLSDFQWL+HFC*PSLPQTPALPHETY*HCG*HSMGLLIGKCRAGIFRKALHALASQLPPVALKTSSVFGRP K+*WSHYPYV*DKCSQNAHKHCSIAHPCPPCVHRRIAEL HTH VPHDTLSKPFSQPI*PWLTPDCSRVCVF*TILHLNTQT+ALQLHSLHPGLRKA*LLATDHHTAFPLV
Subject   5078  KQRVESRPKFAQP*PPLIYCQILYNVGIS*KLKQHLAANPDMTCLSDFQWLRHFC*PSLPQTPALPHETY*HCG*HSMGLLIGKCRAGIFRKALHALASQLPPVALKTSSVFGRPLKR*WSHYPYV*DKCSQNAHKHCSIAHPCPPCVHRRIAELPHTHIVPHDTLSKPFSQPI*PWLTPDCSRVCVF*TILHLNTQTQALQLHSLHPGLRKA*LLATDHHTAFPLV  5758

Range 2: 5079 to 5759 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
495.5 bits(1075) 0.0 220/227(97%) 0/227(0%) Plus/Plus
Query       33  TRGKAVW*SVAKSYAFLRPG*RL*S*RARV*VFK*RMVQNTHTLEQSGVNQG*MGWENGFERVS*GTVWV*DNSAILR*TQGGHG*AIEQCL*AF*EHLS*T*G**LHHFFDGRPKTLEVFKATGGSCEAKACKALRKIPARHFPIKSPIEC*PQCQYVS*GSAGV*GKEG*QKCCNH*KSLRQVMSGLAARCCFDFHEIPTLYKI*Q*IKGG*GWANFGLLSTRCF  713
                TRGKAVW*SVAKSYAFLRPG*RL*S*RA V*VFK*RMVQNTHTLEQSGVNQG*MGWENGFERVS*GT+WV* NSAILR*TQGGHG*AIEQCL*AF*EHLS*T*G**LHH F+GRPKTLEVFKATGGSCEAKACKALRKIPARHFPIKSPIEC*PQCQYVS*GSAGV*GKEG*QKC NH*KSLRQVMSGLAARCCF+FHEIPTLYKI*Q*IKGG*GWANFGLLSTRCF
Subject   5079  TRGKAVW*SVAKSYAFLRPG*RL*S*RA*V*VFK*RMVQNTHTLEQSGVNQG*MGWENGFERVS*GTMWV*GNSAILR*TQGGHG*AIEQCL*AF*EHLS*T*G**LHHLFNGRPKTLEVFKATGGSCEAKACKALRKIPARHFPIKSPIEC*PQCQYVS*GSAGV*GKEG*QKCRNH*KSLRQVMSGLAARCCFNFHEIPTLYKI*Q*IKGG*GWANFGLLSTRCF  5759

Range 3: 5081 to 5758 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
484.9 bits(1052) 0.0 222/226(98%) 0/226(0%) Plus/Plus
Query       35  ERKSCVVIRG*KLCFS*ARMKTXXXXXXXXXXQMKNGSKHTYP*AIWSQPGLDGLGKWL*KSIVRYGVGMRQLSNSSMNTGGAWVSN*AMLVSVLRAFILDIRVMTPSLF*WPSENA*SFQSHRWKLRS*GVQSLTENSCSTLSYQKSH*MLATMSVCFMRQCRSLRQRRLAKVLQPLKITQAGHVGIGC*MLL*FS*NPNIVQNLTID*GWLRLGKLWPAFNTLF  712
                ERKSCVVIRG*KLCFS*ARMKTVKLKS SLSVQMKNGSKHTYP*AIWSQPGLDGLGKWL*KSIVRY VGMRQLSNSSMNTGGAWVSN*AMLVSVLRAFILDIRVMTPS F*WPSENA*SFQSHRWKLRS*GVQSLTENSCSTLSYQKSH*MLATMSVCFMRQCRSLRQRRLAKV QPLKITQAGHVGIGC*MLL*FS*NPNIVQNLTID*GWLRLGKLWPAFNTLF
Subject   5081  ERKSCVVIRG*KLCFS*ARMKTVKLKSLSLSVQMKNGSKHTYP*AIWSQPGLDGLGKWL*KSIVRYDVGMRQLSNSSMNTGGAWVSN*AMLVSVLRAFILDIRVMTPSPF*WPSENA*SFQSHRWKLRS*GVQSLTENSCSTLSYQKSH*MLATMSVCFMRQCRSLRQRRLAKVPQPLKITQAGHVGIGC*MLL*FS*NPNIVQNLTID*GWLRLGKLWPAFNTLF  5758

Range 4: 5188 to 5760 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
439.6 bits(953) 0.0 190/191(99%) 0/191(0%) Plus/Plus
Query      142  WFKTHIPLSNLESTRARWVGKMALKEYREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVSMFHEAVQEFEXXXXXXXXXTIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL  714
                WFKTHIPLSNLESTRARWVGKMALKEYREVRCGYE TQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVSMFHEAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL
Subject   5188  WFKTHIPLSNLESTRARWVGKMALKEYREVRCGYEATQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVSMFHEAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL  5760

Range 5: 5080 to 5136 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.5 bits(106) 0.0 19/19(100%) 0/19(0%) Plus/Plus
Query       34  REEKLCGDPWLKVMLFLGQ  90
                REEKLCGDPWLKVMLFLGQ
Subject   5080  REEKLCGDPWLKVMLFLGQ  5136

Range 6: 5080 to 5760 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
467.1 bits(1013) 0.0 221/227(97%) 0/227(0%) Minus/Minus
Query       34  QNSVLKAGQSLPSLSHP*SIVKFCTMLGFHENQSNI*QPIPT*PA*VIFNGCSTFASXXXXXXXXXXXXHTDIVASIQWDF**ESVEQEFSVRLCTP*LRSFHLWL*KLQAFSDGHQKSDGVITLMSRINALKTLTSIAQLLTHAPPVFIEELLSCLIPTPYLTILFQSHFPNPSSPG*LQIAQGYVCFEPFFI*TLRLELFNFTVFILA*EKHNF*PRITTQLFLS  714
                QNSVLKAGQSLPSLSHP*SIVKFCTMLGFHEN SNI*QPIPT*PA*VIFNGC TFASLLCLKLLHCLMKHTDIVASIQWDF**ESVEQEFSVRLCTP*LRSFHLWL*KLQAFSDGH K DGVITLMSRINALKTLTSIAQLLTHAPPVFIEELLSCLIPT YLTILFQSHFPNPSSPG*LQIAQGYVCFEPFFI*TLRL+LFNFTVFILA*EKHNF*PRITTQLFLS
Subject   5080  QNSVLKAGQSLPSLSHP*SIVKFCTMLGFHEN*SNI*QPIPT*PA*VIFNGCGTFASLLCLKLLHCLMKHTDIVASIQWDF**ESVEQEFSVRLCTP*LRSFHLWL*KLQAFSDGH*KGDGVITLMSRINALKTLTSIAQLLTHAPPVFIEELLSCLIPTSYLTILFQSHFPNPSSPG*LQIAQGYVCFEPFFI*TLRLKLFNFTVFILA*EKHNF*PRITTQLFLS  5760

Range 7: 5187 to 5759 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
424.5 bits(920) 0.0 190/191(99%) 0/191(0%) Minus/Minus
Query      141  KTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE*FSMVXXXXXXXXASNSCTAS*NILTLWLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPMPPLCSSKNC*VVSYPHRTSRYSFKAIFPTHLALVDSRLLKGMCVLNH  713
                KTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE*FSMVAALLLAFFASNSCTAS*NILTLWLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPMPPLCSSKNC*V SYPHRTSRYSFKAIFPTHLALVDSRLLKGMCVLNH
Subject   5187  KTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE*FSMVAALLLAFFASNSCTAS*NILTLWLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPMPPLCSSKNC*VASYPHRTSRYSFKAIFPTHLALVDSRLLKGMCVLNH  5759

Range 8: 5070 to 5135 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.4 bits(108) 0.0 20/22(91%) 0/22(0%) Minus/Minus
Query       24  WPKKSITFSHGSPHSFSSRHTS  89
                WPKKSITFSHGSPHSFSSR  S
Subject   5070  WPKKSITFSHGSPHSFSSRTPS  5135

Grapevine rupestris stem pitting associated virus isolate CS BR, complete genome

Sequence ID: KX958435.1 Length: 8743 Number of Matches: 8

Range 1: 5079 to 5759 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
483.6 bits(1049) 0.0 198/227(87%) 0/227(0%) Minus/Minus
Query       32  KQRVESRPKFAQP*PPLIYCQILYNVGIS*KSKQHLAANPDMTCLSDFQWLQHFC*PSLPQTPALPHETY*HCG*HSMGLLIGKCRAGIFRKALHALASQLPPVALKTSSVFGRPSKK*WSHYPYV*DKCSQNAHKHCSIAHPCPPCVHRRIAELSHTHTVPHDTLSKPFSQPI*PWLTPDCSRVCVF*TILHLNTQTRALQLHSLHPGLRKA*LLATDHHTAFPLV  712
                KQR ESRPKFAQP*PPLIYCQILYNVGIS*+ KQHLAANP MTCLSDFQWLQHFC*PSLPQTPALPHETY*HCG*H MGL IGKC+AGI  KALHALASQLPPVALKTS VFGRP K+*WSH P V*DKC QN H+HC IA P PPCVHRRIAEL HTH VPH   S+PFSQPI*PWLTP+CSRVCVF*TILHLNTQT+ALQLHS HPGLRKA*LLATDHHTAFPLV
Subject   5079  KQRAESRPKFAQP*PPLIYCQILYNVGIS*RLKQHLAANPGMTCLSDFQWLQHFC*PSLPQTPALPHETY*HCG*HLMGLSIGKCQAGISHKALHALASQLPPVALKTSGVFGRPLKR*WSHCPCV*DKCFQNVHRHCLIARPFPPCVHRRIAELFHTHIVPHGAPSRPFSQPI*PWLTPNCSRVCVF*TILHLNTQTQALQLHSPHPGLRKA*LLATDHHTAFPLV  5759

Range 2: 5189 to 5761 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
438.2 bits(950) 0.0 189/191(99%) 0/191(0%) Plus/Plus
Query      142  WFKTHIPLSNLESTRARWVGKMALKEYREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVSMFHEAVQEFEXXXXXXXXXTIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL  714
                WFKTHIPLSNLESTRARWVGKMALKE+REVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNV+MFHEAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL
Subject   5189  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVNMFHEAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL  5761

Range 3: 5081 to 5137 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.5 bits(106) 0.0 19/19(100%) 0/19(0%) Plus/Plus
Query       34  REEKLCGDPWLKVMLFLGQ  90
                REEKLCGDPWLKVMLFLGQ
Subject   5081  REEKLCGDPWLKVMLFLGQ  5137

Range 4: 5188 to 5760 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
417.6 bits(905) 0.0 187/191(98%) 0/191(0%) Minus/Minus
Query      141  KTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE*FSMVXXXXXXXXASNSCTAS*NILTLWLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPMPPLCSSKNC*VVSYPHRTSRYSFKAIFPTHLALVDSRLLKGMCVLNH  713
                KTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE*FSMVAALLLAFFASNSCTAS*NILTLWLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENF+RFRTAIKKVMESLPLCLG*MLSKRSQALLNCSP+PPLCSSKNC*VVSYPHRTSR SFKAIFPTHLALVDS+LLKGMCVLNH
Subject   5188  KTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE*FSMVAALLLAFFASNSCTAS*NILTLWLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFRRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPIPPLCSSKNC*VVSYPHRTSRCSFKAIFPTHLALVDSKLLKGMCVLNH  5760

Range 5: 5071 to 5136 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.4 bits(108) 0.0 20/22(91%) 0/22(0%) Minus/Minus
Query       24  WPKKSITFSHGSPHSFSSRHTS  89
                WPKKSITFSHGSPHSFSSR  S
Subject   5071  WPKKSITFSHGSPHSFSSRTPS  5136

Range 6: 5082 to 5759 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
440.0 bits(954) 0.0 201/226(89%) 0/226(0%) Plus/Plus
Query       35  ERKSCVVIRG*KLCFS*ARMKTXXXXXXXXXXQMKNGSKHTYP*AIWSQPGLDGLGKWL*KSIVRYGVGMRQLSNSSMNTGGAWVSN*AMLVSVLRAFILDIRVMTPSLF*WPSENA*SFQSHRWKLRS*GVQSLTENSCSTLSYQKSH*MLATMSVCFMRQCRSLRQRRLAKVLQPLKITQAGHVGIGC*MLL*FS*NPNIVQNLTID*GWLRLGKLWPAFNTLF  712
                ERKSCVVIRG*KLCFS*ARM+TVKLKS SLSVQMKNGSKHTYP*AIWSQPGLDGLGKW *+S VRY VGM+QLSNSSMNTGG W SN*AM V+VL+AFILD R MTP  F*WPSENA*SFQSHRWKLRS*GVQSL  NSC TLSY+KSH*MLATM +CFMRQCRSLRQRRLAKVLQPLKITQAGH GIGC*MLL* S*NPNIVQNLTID*GWLRLGKLWPAF+TLF
Subject   5082  ERKSCVVIRG*KLCFS*ARMRTVKLKSLSLSVQMKNGSKHTYP*AIWSQPGLDGLGKWP*RSTVRYDVGMKQLSNSSMNTGGEWASN*AMPVNVLKAFILDTRAMTPLPF*WPSENA*SFQSHRWKLRS*GVQSLMGNSCLTLSYRKSH*MLATMLICFMRQCRSLRQRRLAKVLQPLKITQAGHAGIGC*MLL*SS*NPNIVQNLTID*GWLRLGKLWPAFSTLF  5759

Range 7: 5080 to 5760 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
439.6 bits(953) 0.0 197/227(87%) 0/227(0%) Plus/Plus
Query       33  TRGKAVW*SVAKSYAFLRPG*RL*S*RARV*VFK*RMVQNTHTLEQSGVNQG*MGWENGFERVS*GTVWV*DNSAILR*TQGGHG*AIEQCL*AF*EHLS*T*G**LHHFFDGRPKTLEVFKATGGSCEAKACKALRKIPARHFPIKSPIEC*PQCQYVS*GSAGV*GKEG*QKCCNH*KSLRQVMSGLAARCCFDFHEIPTLYKI*Q*IKGG*GWANFGLLSTRCF  713
                TRGKAVW*SVAKSYAFLRPG* L*S*RA V*VFK*RMVQNTHTLEQ GVNQG*MGWENG E   *GT+WV*+NSAILR*TQGG+G AI+QCL* F*+HLS*T G *LH+ F+GRPKT EVFKATGGSCEAKACKAL +IPA HFPI+SPI+C*PQC YVS*GSAGV*GKEG*QKCCNH*KSLRQVM GLAARCCF+ HEIPTLYKI*Q*IKGG*GWANFGLLS RCF
Subject   5080  TRGKAVW*SVAKSYAFLRPG*GL*S*RA*V*VFK*RMVQNTHTLEQFGVNQG*MGWENGLEGAP*GTMWV*NNSAILR*TQGGNGRAIKQCL*TF*KHLS*TQGQ*LHYLFNGRPKTPEVFKATGGSCEAKACKALWEIPA*HFPIESPIKC*PQC*YVS*GSAGV*GKEG*QKCCNH*KSLRQVMPGLAARCCFNLHEIPTLYKI*Q*IKGG*GWANFGLLSARCF  5760

Range 8: 5081 to 5761 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
419.0 bits(908) 0.0 199/227(88%) 0/227(0%) Minus/Minus
Query       34  QNSVLKAGQSLPSLSHP*SIVKFCTMLGFHENQSNI*QPIPT*PA*VIFNGCSTFASXXXXXXXXXXXXHTDIVASIQWDF**ESVEQEFSVRLCTP*LRSFHLWL*KLQAFSDGHQKSDGVITLMSRINALKTLTSIAQLLTHAPPVFIEELLSCLIPTPYLTILFQSHFPNPSSPG*LQIAQGYVCFEPFFI*TLRLELFNFTVFILA*EKHNF*PRITTQLFLS  714
                QNSVLKAGQSLPSLSHP*SIVKFCTMLGFHE+ SNI*QPIP *PA*VIFNGCSTFASLLCLKLLHCLMKH +IVASI WDF *ESV+QEF +RLCTP*LRSFHLWL*KLQAFSDGH K +GVI L+SRINA KT T IA LL H+PPVFIEELLSC IPT YLT+L Q HFPNPSSPG*LQIAQGYVCFEPFFI*TLRL+LFNFTV ILA*EKHNF*PRITTQLFLS
Subject   5081  QNSVLKAGQSLPSLSHP*SIVKFCTMLGFHED*SNI*QPIPA*PA*VIFNGCSTFASLLCLKLLHCLMKHINIVASI*WDFR*ESVKQEFPIRLCTP*LRSFHLWL*KLQAFSDGH*KGNGVIALVSRINAFKTFTGIA*LLAHSPPVFIEELLSCFIPTSYLTVLLQGHFPNPSSPG*LQIAQGYVCFEPFFI*TLRLKLFNFTVLILA*EKHNF*PRITTQLFLS  5761

Grapevine rupestris stem pitting associated virus isolate VF1, partial genome

Sequence ID: KT948710.1 Length: 8716 Number of Matches: 9

Range 1: 5189 to 5761 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
436.4 bits(946) 0.0 188/191(98%) 0/191(0%) Plus/Plus
Query      142  WFKTHIPLSNLESTRARWVGKMALKEYREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVSMFHEAVQEFEXXXXXXXXXTIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL  714
                WFKTHIPLSNLESTRARWVGKMALKEYREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPL+ASHN +MFHEAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL
Subject   5189  WFKTHIPLSNLESTRARWVGKMALKEYREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLSASHNTNMFHEAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL  5761

Range 2: 5081 to 5137 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.5 bits(106) 0.0 19/19(100%) 0/19(0%) Plus/Plus
Query       34  REEKLCGDPWLKVMLFLGQ  90
                REEKLCGDPWLKVMLFLGQ
Subject   5081  REEKLCGDPWLKVMLFLGQ  5137

Range 3: 5079 to 5759 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
458.4 bits(994) 0.0 190/227(84%) 0/227(0%) Minus/Minus
Query       32  KQRVESRPKFAQP*PPLIYCQILYNVGIS*KSKQHLAANPDMTCLSDFQWLQHFC*PSLPQTPALPHETY*HCG*HSMGLLIGKCRAGIFRKALHALASQLPPVALKTSSVFGRPSKK*WSHYPYV*DKCSQNAHKHCSIAHPCPPCVHRRIAELSHTHTVPHDTLSKPFSQPI*PWLTPDCSRVCVF*TILHLNTQTRALQLHSLHPGLRKA*LLATDHHTAFPLV  712
                K+R ESRPK AQP PPLIYCQIL NVGIS*+ KQHLA NPDMTCLSDFQWLQHFC PSL QTP LPH TY +CG*H MGLLIG+C+AGI  KALHALASQLPPVAL+TSSV GRPSK+* SH PYV*DKCSQN HKHCSIA P PPCVHRRIAELSHTH VPH TLS+PFSQPI*PWLTPDCS+VCVF*TILHLNTQ +ALQLHSLHP LRKA*LL  DH TAFPLV
Subject   5079  KRRAESRPKSAQPWPPLIYCQILCNVGIS*RLKQHLATNPDMTCLSDFQWLQHFCSPSLLQTPELPHGTYWYCG*HLMGLLIGRCQAGISHKALHALASQLPPVALRTSSVSGRPSKR**SHCPYV*DKCSQNVHKHCSIARPSPPCVHRRIAELSHTHIVPHGTLSRPFSQPI*PWLTPDCSKVCVF*TILHLNTQLQALQLHSLHPVLRKA*LLTKDHRTAFPLV  5759

Range 4: 5188 to 5760 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
408.0 bits(884) 0.0 184/191(96%) 0/191(0%) Minus/Minus
Query      141  KTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE*FSMVXXXXXXXXASNSCTAS*NILTLWLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPMPPLCSSKNC*VVSYPHRTSRYSFKAIFPTHLALVDSRLLKGMCVLNH  713
                KTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSS+QSRHDLPE*FSMVAALLLAFFASNS TAS NIL LWLA NGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKV+ESLPLCLG*MLSKRSQALLNCSP+PPLCSSKNC*VVSYPHRTSRYSFKAIFPTHLALVDSRLLKGMCVLNH
Subject   5188  KTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSNQSRHDLPE*FSMVAALLLAFFASNS*TASWNILVLWLALNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVIESLPLCLG*MLSKRSQALLNCSPIPPLCSSKNC*VVSYPHRTSRYSFKAIFPTHLALVDSRLLKGMCVLNH  5760

Range 5: 5071 to 5133 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
42.3 bits(86) 0.0 17/21(81%) 0/21(0%) Minus/Minus
Query       24  PKKSITFSHGSPHSFSSRHTS  86
                PKKSITF+ GSPHSFSSR  S
Subject   5071  PKKSITFNQGSPHSFSSRTPS  5133

Range 6: 5080 to 5760 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
418.5 bits(907) 0.0 191/227(84%) 0/227(0%) Plus/Plus
Query       33  TRGKAVW*SVAKSYAFLRPG*RL*S*RARV*VFK*RMVQNTHTLEQSGVNQG*MGWENGFERVS*GTVWV*DNSAILR*TQGGHG*AIEQCL*AF*EHLS*T*G**LHHFFDGRPKTLEVFKATGGSCEAKACKALRKIPARHFPIKSPIEC*PQCQYVS*GSAGV*GKEG*QKCCNH*KSLRQVMSGLAARCCFDFHEIPTLYKI*Q*IKGG*GWANFGLLSTRCF  713
                TRGKAV *S+ KSYAFLR G*RL*S*RA  *VFK*RMVQNTHT EQSGVNQG*MGWENG ERV *GT+WV*DNSAILR*TQGG G AIEQCL* F*EHLS*T*G *L+H FDGRP+TLEV KATGGSCEAKACKAL +IPA H PIKSPI+C*PQ QYV *GS+GV* KEG QKCCNH*KSLRQVMSGL ARCCF+ HEIPTL+KI*Q*IKGG GWA+FGLLS R F
Subject   5080  TRGKAVR*SLVKSYAFLRTG*RL*S*RA*S*VFK*RMVQNTHTFEQSGVNQG*MGWENGLERVP*GTMWV*DNSAILR*TQGGDGRAIEQCL*TF*EHLS*T*GQ*LYHLFDGRPETLEVLKATGGSCEAKACKALWEIPA*HLPIKSPIKC*PQYQYVP*GSSGV*SKEGEQKCCNH*KSLRQVMSGLVARCCFNLHEIPTLHKI*Q*IKGGQGWADFGLLSARRF  5760

Range 7: 5082 to 5759 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
405.2 bits(878) 0.0 191/226(85%) 0/226(0%) Plus/Plus
Query       35  ERKSCVVIRG*KLCFS*ARMKTXXXXXXXXXXQMKNGSKHTYP*AIWSQPGLDGLGKWL*KSIVRYGVGMRQLSNSSMNTGGAWVSN*AMLVSVLRAFILDIRVMTPSLF*WPSENA*SFQSHRWKLRS*GVQSLTENSCSTLSYQKSH*MLATMSVCFMRQCRSLRQRRLAKVLQPLKITQAGHVGIGC*MLL*FS*NPNIVQNLTID*GWLRLGKLWPAFNTLF  712
                ERKSC VI G*KLCFS* RMKTVKLKS  LSVQMKNGSKHTY *AIWSQPGLDGLGKW *KS VRY VGMRQLSNSSMNTGG W SN*AMLV+VLRAFILDIR MT S F*WPS NA*S QSHRWKLRS*GVQSL  NSC T SYQKSH*+LAT+ +C MRQ RSL+QRR AKVLQPLKITQAGHVGIGC*MLL* S*NPNI QNLTID*GW RLG+LWPAF+T F
Subject   5082  ERKSCAVILG*KLCFS*DRMKTVKLKSLKLSVQMKNGSKHTYL*AIWSQPGLDGLGKWP*KSTVRYDVGMRQLSNSSMNTGGGWASN*AMLVNVLRAFILDIRAMTLSPF*WPSGNA*SSQSHRWKLRS*GVQSLMGNSCLTPSYQKSH*VLATIPICSMRQFRSLKQRRRAKVLQPLKITQAGHVGIGC*MLL*SS*NPNIAQNLTID*GWPRLGRLWPAFSTPF  5759

Range 8: 5081 to 5545 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
305.3 bits(660) 0.0 132/155(85%) 0/155(0%) Minus/Minus
Query       34  IVASIQWDF**ESVEQEFSVRLCTP*LRSFHLWL*KLQAFSDGHQKSDGVITLMSRINALKTLTSIAQLLTHAPPVFIEELLSCLIPTPYLTILFQSHFPNPSSPG*LQIAQGYVCFEPFFI*TLRLELFNFTVFILA*EKHNF*PRITTQLFLS  498
                IVAS  WDF**E V+QEF +RLCTP*LRSFHLWL*+LQAF DGHQK D VI LMSRINALKT TSIAQLL H PPVFIEELLSCLIPT YLT+LFQ HFPNPSSPG*LQIAQ YVCFEPFFI*TL  +LFNFTVFIL+*EKHNF*PRIT QLFLS
Subject   5081  IVAST*WDF**EGVKQEFPIRLCTP*LRSFHLWL*ELQAFPDGHQKGDRVIALMSRINALKTFTSIAQLLAHPPPVFIEELLSCLIPTSYLTVLFQGHFPNPSSPG*LQIAQRYVCFEPFFI*TLSFKLFNFTVFILS*EKHNF*PRITAQLFLS  5545

Range 9: 5594 to 5761 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
117.9 bits(251) 0.0 51/56(91%) 0/56(0%) Minus/Minus
Query      547  QNSVLKAGQSLPSLSHP*SIVKFCTMLGFHENQSNI*QPIPT*PA*VIFNGCSTFA  714
                QN VLKAGQSLPSL HP*SIVKFC MLGFHE+ SNI*QPIPT*PA*VIFNGCSTFA
Subject   5594  QNGVLKAGQSLPSLGHP*SIVKFCAMLGFHED*SNI*QPIPT*PA*VIFNGCSTFA  5761

Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome

Sequence ID: KR054734.1 Length: 8753 Number of Matches: 8

Range 1: 5188 to 5760 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
435.0 bits(943) 0.0 188/191(98%) 0/191(0%) Plus/Plus
Query      142  WFKTHIPLSNLESTRARWVGKMALKEYREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVSMFHEAVQEFEXXXXXXXXXTIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL  714
                WFKTHIPLSNLESTRARWVGKMALKE+REVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNV+MF+EAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL
Subject   5188  WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVNMFNEAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL  5760

Range 2: 5080 to 5136 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.5 bits(106) 0.0 19/19(100%) 0/19(0%) Plus/Plus
Query       34  REEKLCGDPWLKVMLFLGQ  90
                REEKLCGDPWLKVMLFLGQ
Subject   5080  REEKLCGDPWLKVMLFLGQ  5136

Range 3: 5187 to 5759 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
397.4 bits(861) 0.0 180/191(94%) 0/191(0%) Minus/Minus
Query      141  KTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE*FSMVXXXXXXXXASNSCTAS*NILTLWLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPMPPLCSSKNC*VVSYPHRTSRYSFKAIFPTHLALVDSRLLKGMCVLNH  713
                KTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE*FS+VAALLLAF ASNS TAS NILTLWLAFNGTFD+ VSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLS  SQALLNCSP+PPLCSSKNC*VVSYP RTSR SFKAIFPTHLALVDSRLLKGMCVLNH
Subject   5187  KTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE*FSIVAALLLAFLASNS*TASLNILTLWLAFNGTFDKNVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSNLSQALLNCSPIPPLCSSKNC*VVSYPQRTSRCSFKAIFPTHLALVDSRLLKGMCVLNH  5759

Range 4: 5082 to 5135 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.9 bits(96) 0.0 17/18(94%) 0/18(0%) Minus/Minus
Query       36  WPKKSITFSHGSPHSFSS  89
                WPKKSIT SHGSPHSFSS
Subject   5082  WPKKSITLSHGSPHSFSS  5135

Range 5: 5084 to 5758 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
399.7 bits(866) 0.0 170/225(76%) 0/225(0%) Minus/Minus
Query       38  KQRVESRPKFAQP*PPLIYCQILYNVGIS*KSKQHLAANPDMTCLSDFQWLQHFC*PSLPQTPALPHETY*HCG*HSMGLLIGKCRAGIFRKALHALASQLPPVALKTSSVFGRPSKK*WSHYPYV*DKCSQNAHKHCSIAHPCPPCVHRRIAELSHTHTVPHDTLSKPFSQPI*PWLTPDCSRVCVF*TILHLNTQTRALQLHSLHPGLRKA*LLATDHHTAFP  712
                ++RVESRPKFAQP*PP IYCQILYNVGIS*K K+HL ANPDMTCL+D   LQHFC*P   QTP LPH TY*HCG*HSM LL   C+A IF KAL ALA Q P VALKT +  G+P KK*W+HYPYV* KC Q  HKHC IA P P CVHRR AELSHT   PH  LS+PFS+PI*PWLTPDCSRVCVF*TILHLNTQT+ALQLH+LHPGLRKA*L A  HHT FP
Subject   5084  RRRVESRPKFAQP*PPSIYCQILYNVGIS*KLKRHLVANPDMTCLNDSL*LQHFC*PF*LQTPELPH*TY*HCG*HSMELLTKMCQAEIFHKALRALALQPPLVALKTLNASGQPLKK*WNHYPYV*GKCFQIFHKHCLIARPYPLCVHRRTAELSHTRNAPHGALSRPFSRPI*PWLTPDCSRVCVF*TILHLNTQTQALQLHNLHPGLRKA*L*AMGHHTVFP  5758

Range 6: 5083 to 5760 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
371.3 bits(804) 0.0 172/226(76%) 0/226(0%) Minus/Minus
Query       37  QNSVLKAGQSLPSLSHP*SIVKFCTMLGFHENQSNI*QPIPT*PA*VIFNGCSTFASXXXXXXXXXXXXHTDIVASIQWDF**ESVEQEFSVRLCTP*LRSFHLWL*KLQAFSDGHQKSDGVITLMSRINALKTLTSIAQLLTHAPPVFIEELLSCLIPTPYLTILFQSHFPNPSSPG*LQIAQGYVCFEPFFI*TLRLELFNFTVFILA*EKHNF*PRITTQLFL  714
                Q+ VLKAGQSLPSLSHP SIVKFCTMLGFHEN S+I* PIPT*PA*+I   CSTFASL   KLL+CL++H DIVASIQW+F* + V+Q+FS+RLC P*L S HLWL*KL    D H KSDG+ITLMSR+NA K+ TSIA LL H P VFIEELLSCLIP  +LT+LFQ HFP+PSSPG*LQIAQGYVCFEPFFI*TLRL+LFNFT+FILA*EKHNF P +TTQ FL
Subject   5083  QDGVLKAGQSLPSLSHPQSIVKFCTMLGFHEN*SDI**PIPT*PA*MILYSCSTFASLFSFKLLNCLIEHIDIVASIQWNF*QKCVKQKFSIRLCAP*LCSLHLWL*KL*TLPDSH*KSDGIITLMSRVNAFKSFTSIA*LLAHTPSVFIEELLSCLIPATHLTVLFQGHFPDPSSPG*LQIAQGYVCFEPFFI*TLRLKLFNFTIFILA*EKHNFKPWVTTQFFL  5760

Range 7: 5085 to 5753 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
365.3 bits(791) 0.0 171/223(77%) 0/223(0%) Plus/Plus
Query       39  GKAVW*SVAKSYAFLRPG*RL*S*RARV*VFK*RMVQNTHTLEQSGVNQG*MGWENGFERVS*GTVWV*DNSAILR*TQGGHG*AIEQCL*AF*EHLS*T*G**LHHFFDGRPKTLEVFKATGGSCEAKACKALRKIPARHFPIKSPIEC*PQCQYVS*GSAGV*GKEG*QKCCNH*KSLRQVMSGLAARCCFDFHEIPTLYKI*Q*IKGG*GWANFGLLSTR  707
                GK VW* +A SYAFLRPG*RL*S*RA V*VFK*RMVQNTHTLEQSGVNQG*MG ENG ER  *G + V*DNSA+LR*TQ G+G AI+QCL*  *+HL *T*G** HHFF+G P+  +VFKAT G C+AKA KAL KI A H  +KS IEC*PQCQYV *GS+GV*  +G*QKCCN+ +S RQVMSGLA RC F+FHEIPTLYKI*Q*I+GG*GWANFGLLSTR
Subject   5085  GKTVW*PMA*SYAFLRPG*RL*S*RA*V*VFK*RMVQNTHTLEQSGVNQG*MGRENGLERAP*GALRV*DNSAVLR*TQRGYGRAIKQCL*KI*KHLP*T*G**FHHFFNGCPEAFKVFKATSGGCKAKARKALWKISA*HIFVKSSIEC*PQCQYVQ*GSSGV*S*KG*QKCCNYRESFRQVMSGLATRCRFNFHEIPTLYKI*Q*IEGG*GWANFGLLSTR  5753

Range 8: 5084 to 5752 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
362.6 bits(785) 0.0 175/223(78%) 0/223(0%) Plus/Plus
Query       38  RKSCVVIRG*KLCFS*ARMKTXXXXXXXXXXQMKNGSKHTYP*AIWSQPGLDGLGKWL*KSIVRYGVGMRQLSNSSMNTGGAWVSN*AMLVSVLRAFILDIRVMTPSLF*WPSENA*SFQSHRWKLRS*GVQSLTENSCSTLSYQKSH*MLATMSVCFMRQCRSLRQRRLAKVLQPLKITQAGHVGIGC*MLL*FS*NPNIVQNLTID*GWLRLGKLWPAFNT  706
                RK+CVV  G KLCFS*ARMK VKLKS SLSVQMKNGSKHTYP*AIWSQPGLDG GKW *KS VR   GMRQLS+SSMNT G W SN*AMLV  L+AF LDIRVM PSLF*W S + *SFQSH+W+L+S*G QSL EN C T   QK H*MLATMS+C MRQ RSL+ +RLAKVLQ  +I QAGHVGIG *M L*FS*NPNIVQNLTID*GWLRLGKLWPAFNT
Subject   5084  RKNCVVTHGLKLCFS*ARMKIVKLKSLSLSVQMKNGSKHTYP*AIWSQPGLDGSGKWP*KSTVRCVAGMRQLSSSSMNTEGVWASN*AMLVKDLKAFTLDIRVMIPSLF*WLSGSV*SFQSHKWRLQS*GAQSLMENFCLTHFCQKFH*MLATMSICSMRQFRSLKLKRLAKVLQL*RIIQAGHVGIGY*MSL*FS*NPNIVQNLTID*GWLRLGKLWPAFNT  5752

Grapevine rupestris stem pitting associated virus isolate SK704 C, complete genome

Sequence ID: KX274276.1 Length: 8726 Number of Matches: 9

Range 1: 5189 to 5761 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
425.4 bits(922) 0.0 184/191(96%) 0/191(0%) Plus/Plus
Query      142  WFKTHIPLSNLESTRARWVGKMALKEYREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVSMFHEAVQEFEXXXXXXXXXTIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL  714
                WFKTHIPLSNLESTRARWVGKMALKEYREVRCGYE TQQFFDEHRGG GEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLD+FLSKVPLNASHN  MF+EAV+EFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL
Subject   5189  WFKTHIPLSNLESTRARWVGKMALKEYREVRCGYEVTQQFFDEHRGGAGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKVPLNASHNSKMFNEAVREFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL  5761

Range 2: 5081 to 5137 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.5 bits(106) 0.0 19/19(100%) 0/19(0%) Plus/Plus
Query       34  REEKLCGDPWLKVMLFLGQ  90
                REEKLCGDPWLKVMLFLGQ
Subject   5081  REEKLCGDPWLKVMLFLGQ  5137

Range 3: 5188 to 5760 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
322.3 bits(697) 0.0 153/191(80%) 0/191(0%) Minus/Minus
Query      141  KTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE*FSMVXXXXXXXXASNSCTAS*NILTLWLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPMPPLCSSKNC*VVSYPHRTSRYSFKAIFPTHLALVDSRLLKGMCVLNH  713
                KTAC*KQA+VCPALATL+LLSN VQC DF+KI+ATS+SQS HDLPE FS+VAALLLAFFASNS TAS NIL L LAF+GT DRK SS+NFP GFARLS AAST GFEN +RFRTAI+KVMES PLCLG*MLS  S ALL+CSP PPLCSSKNC*V S P RTSRYSFKAI PTHLALVDS+LL+G+ VLNH
Subject   5188  KTAC*KQARVCPALATLSLLSNLVQCCDFIKIRATSNSQSLHDLPEWFSIVAALLLAFFASNSRTASLNILEL*LAFSGTLDRKESSKNFPYGFARLSLAASTWGFENLRRFRTAIRKVMESFPLCLG*MLSNLSHALLSCSPAPPLCSSKNC*VTS*PQRTSRYSFKAILPTHLALVDSKLLRGIWVLNH  5760

Range 4: 5083 to 5133 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.8 bits(85) 0.0 15/17(88%) 0/17(0%) Minus/Minus
Query       36  PKKSITFSHGSPHSFSS  86
                P+KSITFSHGSPH+FSS
Subject   5083  PRKSITFSHGSPHNFSS  5133

Range 5: 5082 to 5759 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
227.0 bits(489) 0.0 124/226(55%) 0/226(0%) Plus/Plus
Query       35  ERKSCVVIRG*KLCFS*ARMKTXXXXXXXXXXQMKNGSKHTYP*AIWSQPGLDGLGKWL*KSIVRYGVGMRQLSNSSMNTGGAWVSN*AMLVSVLRAFILDIRVMTPSLF*WPSENA*SFQSHRWKLRS*GVQSLTENSCSTLSYQKSH*MLATMSVCFMRQCRSLRQRRLAKVLQPLKITQAGHVGIGC*MLL*FS*NPNIVQNLTID*GWLRLGKLWPAFNTLF  712
                ER+SCVVI G*KLCFS  +M+ VKLK    + QMKNGSK  +P*AIWSQP   G  +W *KSIVR  V MR LSNS M+T    VSN*AM V  L+AF   I+ M P    W  EN  +FQS RWK  +*G QS   +S   LS  + H*M  T+  C MRQC S +QR+L +V +  +  QAGH GIGC MLL*F *+ +I  NLTI  GWL+LG+   AFNTLF
Subject   5082  ERRSCVVIHG*KLCFSWVKMRIVKLKRWKWNAQMKNGSKPIFP*AIWSQPEPGGWVRWP*KSIVRCAVVMR*LSNSLMSTEVVLVSN*AMHVKDLKAFTQGIKEMIP*PSLWLFENVSNFQSPRWKQPN*GEQSHMGSSY*ILSCLRCH*MPVTIPKCSMRQCGSSKQRKLVRVQRL*RTIQAGHAGIGCWMLL*FL*SRSIAPNLTIGLGWLKLGRPLLAFNTLF  5759

Range 6: 5082 to 5759 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
223.3 bits(481) 0.0 113/226(50%) 0/226(0%) Minus/Minus
Query       35  KQRVESRPKFAQP*PPLIYCQILYNVGIS*KSKQHLAANPDMTCLSDFQWLQHFC*PSLPQTPALPHETY*HCG*HSMGLLIGKCRAGIFRKALHALASQLPPVALKTSSVFGRPSKK*WSHYPYV*DKCSQNAHKHCSIAHPCPPCVHRRIAELSHTHTVPHDTLSKPFSQPI*PWLTPDCSRVCVF*TILHLNTQTRALQLHSLHPGLRKA*LLATDHHTAFPL  712
                KQRVES+   AQ *PP  YCQI  N   S*K +QH  ANP MTCL+      H  * SL +TPALPH T+ +C  H +    GK        AL AL   LPP ALK   VF +P  + W+H+ Y   KC Q  H HCS+AH    C H+RIAEL H H+ PHDTL +P   P   WLTP+C     F*TILHL+    +LQLH+ H    KA*LLA DHHT  PL
Subject   5082  KQRVESKQGSAQL*PP*AYCQIWCNAATS*KLEQHPTANPCMTCLNGSL*SLHSY*LSLLRTPALPH*TFWNCDWHLVAP*TGKNLVRTSHMALLALVWLLPPGALKI*DVFEQP*GRLWNHFLYALGKCFQIFHMHCSVAHQHHLCAHQRIAELPHNHSAPHDTLLRPSYPPTWLWLTPNCLGEYGF*TILHLSIPFPSLQLHNPHLDPGKA*LLAMDHHTTSPL  5759

Range 7: 5072 to 5545 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
172.0 bits(369) 0.0 84/158(53%) 0/158(0%) Minus/Minus
Query       25  IVASIQWDF**ESVEQEFSVRLCTP*LRSFHLWL*KLQAFSDGHQKSDGVITLMSRINALKTLTSIAQLLTHAPPVFIEELLSCLIPTPYLTILFQSHFPNPSSPG*LQIAQGYVCFEPFFI*TLRLELFNFTVFILA*EKHNF*PRITTQLFLSSHL  498
                IV  I W    E +  E  + LC+P*   FHL L*K + FS+ H++  G+I+ M  +NA K+ T IAQLLT    V I+ELLS LI T +LTILF  H  +P   G*LQIA G + FEPFFI*     LFNFT+ IL  EKHNF*P ITTQL LS+ L
Subject   5072  IVTGI*WHLRQERI**ELPIWLCSP*FGCFHLGL*KFETFSNSHKEGYGIISFMPWVNAFKSFTCIAQLLTSTTSVLIKELLSYLITTAHLTILF*GHLTHPPGSG*LQIA*GNMGFEPFFI*AFHFHLFNFTILILTQEKHNF*PWITTQLLLSNSL  5545

Range 8: 5591 to 5761 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.2 bits(149) 0.0 34/57(60%) 0/57(0%) Minus/Minus
Query      544  QNSVLKAGQSLPSLSHP*SIVKFCTMLGFHENQSNI*QPIPT*PA*VIFNGCSTFAS  714
                QNSVLKA + LPS SHP  IVKF  ML  H+N SNI QPIP *PA*++     T  S
Subject   5591  QNSVLKASKGLPSFSHPKPIVKFGAMLRLHKN*SNIQQPIPA*PA*MVLYSRCTLTS  5761

Range 9: 5083 to 5760 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
214.6 bits(462) 0.0 116/226(51%) 0/226(0%) Plus/Plus
Query       36  RGKAVW*SVAKSYAFLRPG*RL*S*RARV*VFK*RMVQNTHTLEQSGVNQG*MGWENGFERVS*GTVWV*DNSAILR*TQGGHG*AIEQCL*AF*EHLS*T*G**LHHFFDGRPKTLEVFKATGGSCEAKACKALRKIPARHFPIKSPIEC*PQCQYVS*GSAGV*GKEG*QKCCNH*KSLRQVMSGLAARCCFDFHEIPTLYKI*Q*IKGG*GWANFGLLSTRCF  713
                RG+ VW*S+AKSYAF    * L*S*R    + K*RMVQN ++ +Q GVNQ  +G  +G +RVS*G +W+* NSAIL * Q    *A EQC+*  *+HL   *  * H+   G  KT ++FKA GGS + KA KA+ ++  R FP+    +C  Q Q V *GSAGV  KE * +C ++ +  RQVM GLA  CC +F+E+  L++I*Q*  GG* WA+  LLSTRCF
Subject   5083  RGEVVW*SMAKSYAFPGSR*GL*S*RDGNGMLK*RMVQNPYSPKQFGVNQSQVGG*DGLKRVS*GALWL*GNSAIL**AQRWCW*ATEQCM*KI*KHLPKA*RK*FHNLPYGCSKTSQIFKAPGGSSQTKASKAIWEVLTRFFPV*GATKCQSQFQNVQ*GSAGVRSKES**ECSDYREPFRQVMQGLAVGCCSNFYEVAALHQI*Q*A*GG*SWADPCLLSTRCF  5760