Nucleotide Sequence (584 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
205.4 | 312.5 | 36% | 5.105e-51 | 43% | GQ140627.1 | |
205.4 | 312.5 | 36% | 5.105e-51 | 43% | NC_013470.1 | |
203.1 | 366.3 | 47% | 2.499e-50 | 38% | KX380787.1 | |
277.4 | 632.5 | 22% | 1.128e-72 | 36% | HE579625.1 | |
159.1 | 629.7 | 53% | 1.005e-50 | 31% | KJ742567.1 |
Alignments
Fusarium graminearum dsRNA mycovirus 4 segment dsRNA1, complete sequence
Sequence ID: GQ140627.1 Length: 2383 Number of Matches: 3
Range 1: 1779 to 2297 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
205.4 bits(442) | 0.0 | 97/173(56%) | 0/173(0%) | Plus/Plus |
Query 14 KMTGINWLGDKSFGTTILEDDDRIERQNTEEGCFKGVQYLGKFFRRHTVGEGGDAFDVVIPYRPIEETVARLYYPERVGGGATRTYLRALGNLLDNYGNPHAAKWLNGXXXXXXXXXXXXPVEWTSDTVQDAARDYTSELVVVPKPKRWSFEEWLALALAPKEEITDMYTIA* 532 ++ G ++ GDKSF T L D E + TEEG F+G+QYLGKF R H + G V +PYRP EET +YYPER G RTY RALGNLLDNYGNP A WLN LLDWLE +++LLP +W DTVQDAARDYTS+LV VP+P RW+FEEW+ L L+ + + Y A* Subject 1779 RIFGQDYTGDKSFATYSLLDMWDEEEEFTEEGKFQGLQYLGKFLRGHKLDLDGRKITVALPYRPCEETFVHMYYPERKSEGVERTYQRALGNLLDNYGNPMMADWLNKLLDWLEPQMELLPTDWLEDTVQDAARDYTSDLVRVPRPLRWTFEEWVHLCLSSDDSDPEWYMYA* 2297
Range 2: 2060 to 2293 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
71.2 bits(149) | 0.0 | 40/78(51%) | 0/78(0%) | Minus/Minus |
Query 295 AMVYISVISSFGARASASHSSNDHRLGFGTTTNSLV*SLAASCTVSDVHSTGSKSNRDSNQSRSPFSHLAACGLP*LS 528 A +Y S S + +HSSN R G GT T SLV*S AASCTVS S G+ S S+QS S FS A G P*LS Subject 2060 AYIYHSGSESSDDKHKCTHSSNVQRNGRGTRTRSLV*SRAASCTVSSSQSVGNSSICGSSQSSSLFSQSAIIGFP*LS 2293
Fusarium graminearum dsRNA mycovirus 4 dsRNA1, complete genome
Sequence ID: NC_013470.1 Length: 2383 Number of Matches: 3
Range 1: 1779 to 2297 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
205.4 bits(442) | 0.0 | 97/173(56%) | 0/173(0%) | Plus/Plus |
Query 14 KMTGINWLGDKSFGTTILEDDDRIERQNTEEGCFKGVQYLGKFFRRHTVGEGGDAFDVVIPYRPIEETVARLYYPERVGGGATRTYLRALGNLLDNYGNPHAAKWLNGXXXXXXXXXXXXPVEWTSDTVQDAARDYTSELVVVPKPKRWSFEEWLALALAPKEEITDMYTIA* 532 ++ G ++ GDKSF T L D E + TEEG F+G+QYLGKF R H + G V +PYRP EET +YYPER G RTY RALGNLLDNYGNP A WLN LLDWLE +++LLP +W DTVQDAARDYTS+LV VP+P RW+FEEW+ L L+ + + Y A* Subject 1779 RIFGQDYTGDKSFATYSLLDMWDEEEEFTEEGKFQGLQYLGKFLRGHKLDLDGRKITVALPYRPCEETFVHMYYPERKSEGVERTYQRALGNLLDNYGNPMMADWLNKLLDWLEPQMELLPTDWLEDTVQDAARDYTSDLVRVPRPLRWTFEEWVHLCLSSDDSDPEWYMYA* 2297
Range 2: 2060 to 2293 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
71.2 bits(149) | 0.0 | 40/78(51%) | 0/78(0%) | Minus/Minus |
Query 295 AMVYISVISSFGARASASHSSNDHRLGFGTTTNSLV*SLAASCTVSDVHSTGSKSNRDSNQSRSPFSHLAACGLP*LS 528 A +Y S S + +HSSN R G GT T SLV*S AASCTVS S G+ S S+QS S FS A G P*LS Subject 2060 AYIYHSGSESSDDKHKCTHSSNVQRNGRGTRTRSLV*SRAASCTVSSSQSVGNSSICGSSQSSSLFSQSAIIGFP*LS 2293
Fusarium graminearum dsRNA mycovirus 5 isolate HN1 segment RNA1, complete sequence
Sequence ID: KX380787.1 Length: 2030 Number of Matches: 4
Range 1: 1426 to 1944 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
203.1 bits(437) | 0.0 | 96/173(55%) | 0/173(0%) | Plus/Plus |
Query 14 KMTGINWLGDKSFGTTILEDDDRIERQNTEEGCFKGVQYLGKFFRRHTVGEGGDAFDVVIPYRPIEETVARLYYPERVGGGATRTYLRALGNLLDNYGNPHAAKWLNGXXXXXXXXXXXXPVEWTSDTVQDAARDYTSELVVVPKPKRWSFEEWLALALAPKEEITDMYTIA* 532 ++ G ++ GDKSF T L D E + TEEG F+G+QYLGKF R + + G V +PYRP EET +YYPER G RTY RALGNLLDNYGNP A WLN LLDWLE +++LLP +W DTVQDAAR+YTS+LV VP+P RW+FEEW+ L L+P + + Y A* Subject 1426 RIFGQDYTGDKSFATYSLLDMWDEEEEFTEEGKFQGLQYLGKFLRGYRLELDGRKITVALPYRPCEETFVHMYYPERKSEGVERTYQRALGNLLDNYGNPLMAAWLNKLLDWLEPQMELLPTDWLEDTVQDAARNYTSDLVRVPRPLRWTFEEWVHLCLSPDDSDPEWYMYA* 1944
Range 2: 1707 to 1940 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
72.5 bits(152) | 0.0 | 40/78(51%) | 0/78(0%) | Minus/Minus |
Query 295 AMVYISVISSFGARASASHSSNDHRLGFGTTTNSLV*SLAASCTVSDVHSTGSKSNRDSNQSRSPFSHLAACGLP*LS 528 A +Y S S G + +HSSN HR G GT T SLV* AAS TVS S G+ S SNQS + F+H A G P*LS Subject 1707 AYIYHSGSESSGDKHRCTHSSNVHRKGRGTLTRSLV*FRAAS*TVSSSQSVGNSSICGSNQSNNLFNHAAIRGFP*LS 1940
Range 3: 1518 to 1655 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.9 bits(83) | 0.0 | 22/46(48%) | 0/46(0%) | Minus/Minus |
Query 106 RSG*YRRATVSSMGR*GITTSNASPPSPTVWRRKNLPKY*TPLKHP 243 RSG*Y VSS GR*G T P S + R+NLP+Y P P Subject 1518 RSG*YMWTKVSSHGR*GSATVIFRPSSSNL*PRRNLPRYCNP*NFP 1655
Range 4: 1705 to 1887 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
49.6 bits(102) | 0.0 | 23/61(38%) | 0/61(0%) | Minus/Minus |
Query 293 PFLKRPPFGLRNNYQLTGIVSGCVLHRVRCPFHW**VQSGLQPVKKSIQPLSSMRITVVIQ 475 P LKRP R +Q+TG+V +L+RV P + LQPV++ IQP RI+++++ Subject 1705 PLLKRPSQRARYPHQITGVVPRRILNRVLQPISGQQLHLWLQPVQQFIQPCRHQRISIIVE 1887
Uncultured dsRNA virus genomic RNA containing putative RdRp, contig 507Hv1_454_3
Sequence ID: HE579625.1 Length: 639 Number of Matches: 7
Range 1: 137 to 625 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
277.4 bits(599) | 0.0 | 116/163(71%) | 0/163(0%) | Plus/Plus |
Query 5 SVLKMTGINWLGDKSFGTTILEDDDRIERQNTEEGCFKGVQYLGKFFRRHTVGEGGDAFDVVIPYRPIEETVARLYYPERVGGGATRTYLRALGNLLDNYGNPHAAKWLNGXXXXXXXXXXXXPVEWTSDTVQDAARDYTSELVVVPKPKRWSFEEWLALALA 493 + L++T INW+GDKSF TILEDDDRIERQ E+GCF+G+QYLGK+FRR T+ EG +V+IPYRP+ ETVAR+YYPER RTYLRALGNLLDNYGNP AA+WLN LLDWLE+R+D LP+EW+ DTVQDAARDYTSE V+VPKP+RW++EEWLAL LA Subject 137 ATLELTSINWIGDKSFSCTILEDDDRIERQGNEDGCFRGIQYLGKYFRRQTIREGDSTEEVIIPYRPVAETVARMYYPERAANQPYRTYLRALGNLLDNYGNPIAARWLNDLLDWLEARVDTLPLEWSDDTVQDAARDYTSERVLVPKPRRWTYEEWLALTLA 625
Range 2: 427 to 624 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.9 bits(192) | 0.0 | 45/66(68%) | 0/66(0%) | Minus/Minus |
Query 295 ARASASHSSNDHRLGFGTTTNSLV*SLAASCTVSDVHSTGSKSNRDSNQSRSPFSHLAACGLP*LS 492 A A+HSS H LGFGT+T SLV*SLAASCTVS HS+GS S R SNQS SH AA GLP*LS Subject 427 ASVRANHSS*VHLLGFGTSTLSLV*SLAASCTVSSDHSSGSVSTRASNQSNRSLSHRAAIGLP*LS 624
Range 3: 143 to 367 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
65.7 bits(137) | 0.0 | 28/75(37%) | 0/75(0%) | Minus/Minus |
Query 11 IIQASYRFLNGPIGNYHIKRITTLTYSMAAEEFAQILNPFKAPLFCILTLDAIVIFQNRGTKALIPQPIDACHFQ 235 II +R N IG+Y++ R L ++++ FA+ILN K P+ LTL+ +V+ Q +AL+P P+D FQ Subject 143 IIHPRHRLSNRAIGDYYLLR*VALANCLSSKVFAEILNSAKTPILIALTLNPVVVLQYSA*EALVPDPVDRRQFQ 367
Range 4: 238 to 372 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
61.6 bits(128) | 0.0 | 29/45(64%) | 0/45(0%) | Minus/Minus |
Query 106 SG*YRRATVSSMGR*GITTSNASPPSPTVWRRKNLPKY*TPLKHP 240 SG*Y ATVS+ GR*GI TS+ PS V RRK LP+Y* P KHP Subject 238 SG*YILATVSATGR*GIITSSVESPSRIVCRRKYLPRY*IPRKHP 372
Range 5: 425 to 616 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.2 bits(112) | 0.0 | 25/64(39%) | 0/64(0%) | Minus/Minus |
Query 293 ERQPFLKRPPFGLRNNYQLTGIVSGCVLHRVRCPFHW**VQSGLQPVKKSIQPLSSMRITVVIQ 484 E QP L PP LR+ + L ++ C+LHR+ P V S LQP+++ I+P I V+IQ Subject 425 ESQPLLVGPPPRLRHQHPLASVIPRCILHRIIRPLQRQCVNSRLQPIQQIIKPSCRNWIAVIIQ 616
Range 6: 150 to 371 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
41.4 bits(84) | 0.0 | 27/74(36%) | 0/74(0%) | Plus/Plus |
Query 18 *QASIGWGIRALVPRFWKMTIASSVRIQKRGALKGFSIWANSSAAIL*VRVVMRLMW*FPIGPLRKR*LACIIQ 239 *+ S G G RA +W+ T SVR + G FSI AN+ R R * PI L +R CII+ Subject 150 *RRSTGSGTRASHALYWRTTTGLSVRAMRMGVFAEFSISANTFDDRQFARATQRRR**SPIALLLRRWRGCIIR 371
Gremmeniella abietina RNA virus 6 strain GaRV6_1 RNA dependent RNA polymerase gene, complete cds
Sequence ID: KJ742567.1 Length: 2165 Number of Matches: 10
Range 1: 1682 to 2032 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
159.1 bits(341) | 0.0 | 72/117(62%) | 0/117(0%) | Plus/Plus |
Query 182 DVVIPYRPIEETVARLYYPERVGGGATRTYLRALGNLLDNYGNPHAAKWLNGXXXXXXXXXXXXPVEWTSDTVQDAARDYTSELVVVPKPKRWSFEEWLALALAPKEEITDMYTIA* 532 + V+PYRP+EETVAR+ YPER Y R LGNLLD YGNP A+WLN LLDWLE +L +P WTSD+VQDAARDYT+ V VPKPKRWS+EEWL L L+ K + DMY + * Subject 1682 EAVVPYRPMEETVARVLYPEREARDVLHLYERVLGNLLDGYGNPLTARWLNELLDWLEPKLAFMPTTWTSDSVQDAARDYTAVEVEVPKPKRWSWEEWLVLTLSEKRDAQDMYIVC* 2032
Range 2: 1508 to 1648 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
65.7 bits(137) | 0.0 | 26/47(55%) | 0/47(0%) | Plus/Plus |
Query 8 VLKMTGINWLGDKSFGTTILEDDDRIERQNTEEGCFKGVQYLGKFFR 148 V +TG+NWLGDKSF T L D + TE+G F+GVQYLGK+ R Subject 1508 VRDLTGVNWLGDKSFATDTLLDLEPFPEDGTEDGRFQGVQYLGKYLR 1648
Range 3: 1795 to 2022 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
91.3 bits(193) | 0.0 | 42/76(55%) | 0/76(0%) | Minus/Minus |
Query 295 VYISVISSFGARASASHSSNDHRLGFGTTTNSLV*SLAASCTVSDVHSTGSKSNRDSNQSRSPFSHLAACGLP*LS 522 +YIS S F R + +HSS+DHR GFGT+T++ V*S AASCT+S VH G ++ SNQS S FS A GLP* S Subject 1795 IYISCASRFSERVNTNHSSHDHRFGFGTSTSTAV*SRAASCTLSLVHVVGINASLGSNQSSSSFSQRAVKGLP*PS 2022
Range 4: 1606 to 1746 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.9 bits(83) | 0.0 | 22/47(47%) | 0/47(0%) | Minus/Minus |
Query 106 TRSG*YRRATVSSMGR*GITTSNASPPSPTVWRRKNLPKY*TPLKHP 246 +RSG RATVSS+GR G T S + +RK LP+Y TP P Subject 1606 SRSGYNTRATVSSIGRYGTTASPPPNSAGMSIKRKYLPRYCTPWNLP 1746
Range 5: 1711 to 2031 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
65.2 bits(136) | 0.0 | 42/107(39%) | 0/107(0%) | Plus/Plus |
Query 211 GNGSSPVLSRTCGWGSHSDLPTSFGKSLG*LR*SACC*VAEWTS*LVGVPIGLTTSGMDI*HGAGRSQRLYQ*VGSCSEAQTVVV*GMAGARPSSERGDYRYVHHSL 531 G+G + V+SRT G + + G+S G LR* C +AE + LVG G+ MD * A RS LY G +E + VV+ GM G P E G RYV+ L Subject 1711 GDGRTCVISRTRS*GCAAPV*KGAGQSAGRLR*PLNCTLAERAAGLVGAQAGVYADHMDQ*QRARRSPGLYGGGGGGAETKAVVMGGMVGVNPL*EAGRARYVYSLL 2031
Range 6: 1782 to 1922 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.3 bits(99) | 0.0 | 20/47(43%) | 0/47(0%) | Plus/Plus |
Query 282 WEISWITTVIRMLLSG*MDFLTGWSPDWTYYQWNGHLTRCRTQPETI 422 W I W TV L +G* GWSP W + +G +T C+TQP I Subject 1782 WAICWTVTVTP*LHAG*TSCWIGWSPSWRLCRPHGPVTACKTQPGII 1922
Range 7: 1682 to 1864 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
39.1 bits(79) | 0.0 | 19/61(31%) | 0/61(0%) | Minus/Minus |
Query 182 QSGLQPVKKSIQPLSSMRITVVIQEIXXXXXXXXXXXPTHTFWIIQASYRFLNGPIGNYHI 364 Q GLQP+++ +QP S +TV +Q+I+Q + P+ +FWI R L+ + ++ + Subject 1682 QLGLQPIQQLVQPACS*GVTVTVQQIAQHPFIQVQHIPSFSFWI*HTCDRLLHWTVRDHSL 1864
Range 8: 1883 to 2020 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
37.7 bits(76) | 0.0 | 18/46(39%) | 0/46(0%) | Minus/Minus |
Query 383 VHICNLLFRS*GERQPFLKRPPFGLRNNYQLTGIVSGCVLHRVRCP 520 +HI + G QPFL PP R+ + I+ GCVLH V P Subject 1883 IHILRVPLLREG*HQPFLP*PPLWFRHLHLHRRIIPGCVLHAVTGP 2020
Range 9: 1944 to 2018 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
28.6 bits(56) | 0.0 | 12/25(48%) | 0/25(0%) | Plus/Plus |
Query 444 RSPNGGRLRNGWRSP*LRKRRLQIC 518 R+ +GG RNGW P LR +IC Subject 1944 RNQSGGHGRNGWC*PSLRSGTRKIC 2018
Range 10: 1782 to 2018 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.8 bits(111) | 0.0 | 30/79(38%) | 0/79(0%) | Minus/Minus |
Query 282 TYL*SPLSELGRAPAIPQTTTVWASEQLPTHWYSLWLRPAPCQMSIPLVVSPIGTPTSQEVHSAT*QHADYRSYPRDFP 518 TYL P S+ G P IP TT S P Y+ LR A C S+ +P PT+ SA+ Q YR+ P D P Subject 1782 TYLARPASQRGLTPTIPPMTTALVSAPPPPPPYNPGLRLARCHWSMWSA*TPAWAPTNPAARSASVQLRGYRNRPADCP 2018