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Queries

Nucleotide Sequence (2000 letters)

Query ID:ds2016-132_21
Query definition:No definition line
Query length:301
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 17 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
200
400
600
800
1000
1200
1400
1600
1800
2000

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
1343.2 1343.2 33% 0 99% ALB35654

Alignments

replication-associated polyprotein [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|ALB35654.1| Length: 2161 Number of Matches: 1

Range 1: 969 to 1625 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
1343.2 bits(3475) 0.0 651/657(99%) 0/657(0%) Minus/Plus
Query        1  VSKLLDVPRSKKQSIIVLEGALAIDTSYGPKVLGSFEVFKGDFNIKKIEDGSIFVISYKAPVRSSGKLRVHKTECSFSGSKEVLLGCQIEASADYDIDDFNKFPVPGDGNCFWHSVGFLLSTDGLALKAGISSFVESESLVDPSLSAQTVLRQLSDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPGGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRRVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSDIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKIANLKAGHCVIFDEVQLFPPGYIDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKYGGVLISHDSFHTDDRRWMTALSRFSHNLDLVNITGISVE  1971
                +SKLLDVPRSKKQSIIVLEGALAIDTSYGPKVLGSFE+FKGDFNIKKIEDGSIFVISYKAPVRSSGKLRVHKTECSFSGSKEVLLGCQIEASADYDIDDFNKFPVPGDGNCFWHSVGFLLSTDGLALKAGI SFVESESLVDPSLSAQTVLRQLSDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPGGRMSALFDITNEHIRHVEKIGNGPQSIKVDELR+VKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSDIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKIANLKAGHCVIFDEVQLFPPGYIDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFK+GGVLISHDSFHTDDRRW+TALSRFSHNLDLVNITGISVE
Subject    969  LSKLLDVPRSKKQSIIVLEGALAIDTSYGPKVLGSFELFKGDFNIKKIEDGSIFVISYKAPVRSSGKLRVHKTECSFSGSKEVLLGCQIEASADYDIDDFNKFPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESLVDPSLSAQTVLRQLSDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPGGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSDIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKIANLKAGHCVIFDEVQLFPPGYIDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGVLISHDSFHTDDRRWLTALSRFSHNLDLVNITGISVE  1625

Nucleotide Sequence (675 letters)

Query ID:ds2016-132_21
Query definition:No definition line
Query length:301
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 17 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
68
136
204
272
340
408
476
544
612
675

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
433.3 433.3 32% 4.982e-136 98% ALB35654

Alignments

replication-associated polyprotein [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|ALB35654.1| Length: 2161 Number of Matches: 1

Range 1: 1758 to 1976 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
433.3 bits(1113) 0.0 215/219(98%) 0/219(0%) Plus/Plus
Query        3  GELLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVNMFNEAVQEFEXXXXXXXXXTIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVKARNFTGICTESDYEAFDASQDHFILSFELQVMRFLGLP  659
                GE LSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVNMFNEAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVKAR FTG+CTESDYEAFDASQDHFIL+FELQVMRFLGLP
Subject   1758  GEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVNMFNEAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVKARGFTGVCTESDYEAFDASQDHFILAFELQVMRFLGLP  1976

Nucleotide Sequence (941 letters)

Query ID:ds2016-132_21
Query definition:No definition line
Query length:301
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 17 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
95
190
285
380
475
570
665
760
855
941

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
595.1 595.1 33% 0 99% AQN80517

Alignments

replicase [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|AQN80517.1| Length: 2161 Number of Matches: 1

Range 1: 1572 to 1878 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
595.1 bits(1533) 0.0 305/307(99%) 0/307(0%) Plus/Plus
Query        9  LTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVSVGRNEGVREEKLCGDPWLKVMLFLGQXXXXXXXXXXXXXXXXXWFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMLEAVREFEEKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHHTK  929
                LTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVS+GRNEGVREEKLCGDPWLKVMLFLGQDEDCEVEELESECSNEEWFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMLEAVREFEEKKASKSAATIENHSGRSCRDWLLDVALIFMKSQH TK
Subject   1572  LTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGLRVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQDEDCEVEELESECSNEEWFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMLEAVREFEEKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTK  1878

Nucleotide Sequence (1147 letters)

Query ID:ds2016-132_21
Query definition:No definition line
Query length:301
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 17 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
115
230
345
460
575
690
805
920
1035
1147

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
370.9 370.9 16% 2.567e-124 100% BAF34850

Alignments

24.4 kDa hypothetical protein [Grapevine rupestris stem pitting-associated virus]

Sequence ID: dbj|BAF34850.1| Length: 221 Number of Matches: 1

Range 1: 44 to 221 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
370.9 bits(951) 0.0 178/178(100%) 0/178(0%) Minus/Plus
Query      614  EDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ  1147
                EDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ
Subject     44  EDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ  221

Nucleotide Sequence (658 letters)

Query ID:ds2016-132_21
Query definition:No definition line
Query length:301
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 17 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
66
132
198
264
330
396
462
528
594
658

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
451.1 451.1 33% 2.087e-142 99% APA22558

Alignments

replicase [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|APA22558.1| Length: 2161 Number of Matches: 1

Range 1: 1323 to 1541 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
451.1 bits(1159) 0.0 217/219(99%) 0/219(0%) Minus/Plus
Query        2  TGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDGCKVAKAGKSKKEGWDVVTFEVFLRKVSGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFL  658
                TGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDD CKVAKAGKSKKEGWDVVTFEVFLRKVS LKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFL
Subject   1323  TGVISDEKFSDAKPWLSGISTADIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKVSSLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFL  1541

Nucleotide Sequence (1368 letters)

Query ID:ds2016-132_21
Query definition:No definition line
Query length:301
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 17 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
137
274
411
548
685
822
959
1096
1233
1368

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
444.9 444.9 16% 3.055e-152 98% ABL10064

Alignments

triple gene block protein 1 [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|ABL10064.1| Length: 221 Number of Matches: 1

Range 1: 1 to 221 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
444.9 bits(1143) 0.0 216/221(98%) 0/221(0%) Plus/Plus
Query       46  MNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDEAFVAFTAGVPDSPNLTGRYIKPYAPGCAVQGKINILDEYLSVSDTSGFDVLFSDPYQNVSIPREAHFIKTRMCRFGTNICKYFQSFGFDVCSDGVDKVVVGSPFELEVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFDVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ  708
                MNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDEAFVAFTAGVPDSPNLTGRYIKPYAPGCAVQGKINILDEYLSVSDTSGFDVLFSDPYQNVSIPREAHFIKT+ CRFGTN CKY QSFGF+VCSDGVDKVVVGSPFELEVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFDVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ
Subject      1  MNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDEAFVAFTAGVPDSPNLTGRYIKPYAPGCAVQGKINILDEYLSVSDTSGFDVLFSDPYQNVSIPREAHFIKTKTCRFGTNTCKYLQSFGFNVCSDGVDKVVVGSPFELEVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFDVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ  221

Nucleotide Sequence (443 letters)

Query ID:ds2016-132_21
Query definition:No definition line
Query length:301
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 17 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
45
90
135
180
225
270
315
360
405
443

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
151.0 151.0 16% 1.976e-41 100% BAF34849

Alignments

RNA-dependent RNA polymerase, partial [Grapevine rupestris stem pitting-associated virus]

Sequence ID: dbj|BAF34849.1| Length: 266 Number of Matches: 1

Range 1: 195 to 266 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
151.0 bits(380) 0.0 72/72(100%) 0/72(0%) Plus/Plus
Query        2  WERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID  217
                WERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID
Subject    195  WERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID  266

Nucleotide Sequence (349 letters)

Query ID:ds2016-132_21
Query definition:No definition line
Query length:301
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 17 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
35
70
105
140
175
210
245
280
315
349

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
245.0 245.0 33% 1.382e-78 98% ADA79796

Alignments

coat protein [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|ADA79796.1| Length: 259 Number of Matches: 1

Range 1: 81 to 196 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
245.0 bits(624) 0.0 114/116(98%) 0/116(0%) Plus/Plus
Query        1  GCIDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTMRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESA  348
                G IDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTT+RRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESA
Subject     81  GAIDELIRAFGESGISESDQFNVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESA  196

Nucleotide Sequence (803 letters)

Query ID:ds2016-132_21
Query definition:No definition line
Query length:301
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 17 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
81
162
243
324
405
486
567
648
729
803

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
424.5 424.5 26% 3.276e-147 100% BAF34855

Alignments

24.4 kDa hypothetical protein [Grapevine rupestris stem pitting-associated virus]

Sequence ID: dbj|BAF34855.1| Length: 221 Number of Matches: 1

Range 1: 1 to 210 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
424.5 bits(1090) 0.0 209/210(100%) 0/210(0%) Minus/Plus
Query       29  MNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKHYSPGCAVQGKVNILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAA  658
                MNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIK YSPGCAVQGKVNILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAA
Subject      1  MNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKVNILDEYLSVQDISGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAA  210

Nucleotide Sequence (324 letters)

Query ID:ds2016-132_21
Query definition:No definition line
Query length:301
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 17 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
33
66
99
132
165
198
231
264
297
324

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
202.2 202.2 32% 2.193e-63 94% AER41977

Alignments

RNA-dependent RNA polymerase, partial [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|AER41977.1| Length: 158 Number of Matches: 1

Range 1: 54 to 157 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
202.2 bits(513) 0.0 98/104(94%) 0/104(0%) Minus/Plus
Query       12  EWVRARGFTGICTESDYEAFDASQDHFILAFELQIMKFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEASTFLFNTMANMLFTFLRYELTGSESIASTGPN  323
                EWVRARGFTGICTESDYEAFDASQDHFILAFELQIMKFLGLPEDLILDYEFIKIHLGSKLGSF+IMRFTGEA+TFLFNTMANMLFTFLRYELTGSESIA  G +
Subject     54  EWVRARGFTGICTESDYEAFDASQDHFILAFELQIMKFLGLPEDLILDYEFIKIHLGSKLGSFSIMRFTGEANTFLFNTMANMLFTFLRYELTGSESIAFAGDD  157

Nucleotide Sequence (350 letters)

Query ID:ds2016-132_21
Query definition:No definition line
Query length:301
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 17 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
35
70
105
140
175
210
245
280
315
350

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
234.6 234.6 33% 6.406e-68 97% CBX19981

Alignments

replicase [Grapevine rupestris stem pitting-associated virus]

Sequence ID: emb|CBX19981.1| Length: 2161 Number of Matches: 1

Range 1: 1056 to 1171 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
234.6 bits(597) 0.0 112/116(97%) 0/116(0%) Plus/Plus
Query        2  QIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGFALKAGIRSFVESERLISSDLSAPTISKQLEENACAESEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILSSK  349
                QIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGFALKAGIRSFVESERLISSDLSAPTISKQLEENA AE+EMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGIL  K
Subject   1056  QIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGFALKAGIRSFVESERLISSDLSAPTISKQLEENAYAENEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLK  1171

Nucleotide Sequence (1353 letters)

Query ID:ds2016-132_21
Query definition:No definition line
Query length:301
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 17 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
136
272
408
544
680
816
952
1088
1224
1353

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
926.8 926.8 33% 0 100% AQN80517

Alignments

replicase [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|AQN80517.1| Length: 2161 Number of Matches: 1

Range 1: 1084 to 1533 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
926.8 bits(2394) 0.0 448/450(100%) 0/450(0%) Minus/Plus
Query        3  VGFLLSTDGLALKAGIRSFVESESPVDPALSSPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGSGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAI  1352
                VGFLLSTDGLALKAGIRSFVESESPVDPALS PTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIG+GPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAI
Subject   1084  VGFLLSTDGLALKAGIRSFVESESPVDPALSGPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFADYAI  1533

Nucleotide Sequence (367 letters)

Query ID:ds2016-132_21
Query definition:No definition line
Query length:301
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 17 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
37
74
111
148
185
222
259
296
333
367

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
248.8 248.8 33% 9.291e-73 99% CBX19981

Alignments

replicase [Grapevine rupestris stem pitting-associated virus]

Sequence ID: emb|CBX19981.1| Length: 2161 Number of Matches: 1

Range 1: 378 to 499 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
248.8 bits(634) 0.0 121/122(99%) 0/122(0%) Minus/Plus
Query        2  GSLLMPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDITSDFFEHLFLFSCLSELIEENVEVVMDNSWFGLGDPQFNRQRAPFFLGSSYWLNSKFSVEHKFSGAI  367
                GSLLMPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDIT DFFEHLFLFSCLSELIEENVEVVMDNSWFGLGDPQFNRQRAPFFLGSSYWLNSKFSVEHKFSGAI
Subject    378  GSLLMPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDITPDFFEHLFLFSCLSELIEENVEVVMDNSWFGLGDPQFNRQRAPFFLGSSYWLNSKFSVEHKFSGAI  499

Nucleotide Sequence (327 letters)

Query ID:ds2016-132_21
Query definition:No definition line
Query length:301
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 17 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
33
66
99
132
165
198
231
264
297
327

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
134.4 134.4 20% 1.1e-35 98% BAF34849

Alignments

RNA-dependent RNA polymerase, partial [Grapevine rupestris stem pitting-associated virus]

Sequence ID: dbj|BAF34849.1| Length: 266 Number of Matches: 1

Range 1: 202 to 266 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
134.4 bits(337) 0.0 64/65(98%) 0/65(0%) Plus/Plus
Query        3  RDMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID  197
                R+MGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID
Subject    202  REMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID  266

Nucleotide Sequence (413 letters)

Query ID:ds2016-132_21
Query definition:No definition line
Query length:301
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 17 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
42
84
126
168
210
252
294
336
378
413

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
233.4 233.4 32% 4.061e-67 90% CBX19981

Alignments

replicase [Grapevine rupestris stem pitting-associated virus]

Sequence ID: emb|CBX19981.1| Length: 2161 Number of Matches: 1

Range 1: 557 to 689 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
233.4 bits(594) 0.0 120/133(90%) 0/133(0%) Plus/Plus
Query        3  EVQNSYKVGLFKHIKALTYCFNSCGLQWFLLRRRSNLKFLKDGASSFANLSCEVIKAYKSVVLQATLPEALLSLTKVFIRDSDLNDVFTSELISNDESVGLVCSAGSTSEKSQSVNCEASRVPVSSSSTQLPG  401
                E    YKVGLFKHIK LTY FNSCGLQ FLL+R SNLKFLKDGASSFANLSCEVIKAYKSVV QATLPEALLSLTKVFIRDSDLND FTSELISNDESVGLVCSAGSTSEKSQ VNCEASRVPVSSSSTQLP 
Subject    557  EAHIFYKVGLFKHIKPLTYWFNSCGLQCFLLKRGSNLKFLKDGASSFANLSCEVIKAYKSVVSQATLPEALLSLTKVFIRDSDLNDAFTSELISNDESVGLVCSAGSTSEKSQPVNCEASRVPVSSSSTQLPA  689

Nucleotide Sequence (951 letters)

Query ID:ds2016-132_21
Query definition:No definition line
Query length:301
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 17 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
96
192
288
384
480
576
672
768
864
951

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
613.2 613.2 33% 0 96% ALB35654

Alignments

replication-associated polyprotein [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|ALB35654.1| Length: 2161 Number of Matches: 1

Range 1: 379 to 691 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
613.2 bits(1580) 0.0 299/313(96%) 0/313(0%) Minus/Plus
Query        3  SLLMPNISKLVMSFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLIDITPDFFEHLFLFSCLNELIAEDIEEVMDGSWFGLGNLHFNRQRAPYSLGVSHWINSPFSVEHKFAGVINHQILYVALSLVPLSDDPSFKLTSREVDSALSSVRMALGVTGQSKLFGFLVNNTFINEVQRGYKLRLAQHLKSLTWLFHFCGCQWFLLCRRTNLKFLSDRKSSFADLDCGVAKIYSLVSAQAIAPGVLSGLTKVYSFGSNSQQKLISSNVLEGKLCESVQSPNAHFGETLVSHDQEGKVVTSTPHTSQLLDA  941
                SLLMPNISKLV+SFLCRMMPNALARLSSSFRETSLDSFV+ALEPFNFSVNLIDITPDFFEHLFLFSCLNELIAEDIEE MDGSWFGLGNLHFNRQRAPYSLGVSHWI SPFSVEHKFAGVIN QILYVALSLVPLSDDPSFKLTSREVDSALSSVR ALGVTGQSKLFGFLVNNT  NEVQRGYKLRLAQHLKSLTWLFHFCGCQWFLLCRR NLKFLSDRKSSFAD DCGVAKIYSLV+AQAIAP VLSGLTKVYSFGSNSQQKLISSN+LEG LCESVQSPNAHFGETLVSHDQEGKVVTSTPHTSQLLDA
Subject    379  SLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVHALEPFNFSVNLIDITPDFFEHLFLFSCLNELIAEDIEEAMDGSWFGLGNLHFNRQRAPYSLGVSHWIKSPFSVEHKFAGVINRQILYVALSLVPLSDDPSFKLTSREVDSALSSVRKALGVTGQSKLFGFLVNNTLTNEVQRGYKLRLAQHLKSLTWLFHFCGCQWFLLCRRINLKFLSDRKSSFADPDCGVAKIYSLVTAQAIAPEVLSGLTKVYSFGSNSQQKLISSNILEGNLCESVQSPNAHFGETLVSHDQEGKVVTSTPHTSQLLDA  691

Nucleotide Sequence (675 letters)

Query ID:ds2016-132_21
Query definition:No definition line
Query length:301
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 17 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
68
136
204
272
340
408
476
544
612
675

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
460.3 460.3 33% 1.236e-145 100% AQN80517

Alignments

replicase [Grapevine rupestris stem pitting-associated virus]

Sequence ID: gb|AQN80517.1| Length: 2161 Number of Matches: 1

Range 1: 159 to 381 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
460.3 bits(1183) 0.0 222/223(100%) 0/223(0%) Minus/Plus
Query        6  SLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVDSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLKARSVVLSDGSRYAVDVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL  674
                SLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILV SPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLKARSVVLSDGSRYAVDVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL
Subject    159  SLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVGSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLKARSVVLSDGSRYAVDVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSGSLL  381