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Nucleotide Sequence (815 letters)

Query ID:ds2016-57_42
Query definition:No definition line
Query length:352
Program:TBLASTX 2.2.29+
Database:/save/stheil/db/refseq_vir/viral.genomic.fna

Graphic Summary

Distribution of 1 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
82
164
246
328
410
492
574
656
738
815

Descriptions

Alignments

Mycovirus FusoV RNA 1, complete sequence

Sequence ID: Length: 1645 Number of Matches: 2

Range 1: 901 to 1026 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.6 bits(102) 0.0 20/42(48%) 0/42(0%) Minus/Plus
Query      433  TASSETRNSHVFDFLHYYFKRTPILLPSGQLIKKAGGVPSGS  558
                T  S  +  +V+D + YYF  TPIL+P G++ +K  GVPSGS
Subject    901  TKRSRQKWKNVWDGMVYYFINTPILMPDGRMFRKRRGVPSGS  1026

Range 2: 1117 to 1416 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.5 bits(93) 0.0 26/100(26%) 0/100(0%) Minus/Plus
Query       34  VVGDDMATSVDHDFSIEEFSHYMSQLGFEINPSKVMFSDKGIELKFLGYSKRGGGLYRPIEELLQTAFFPEKYVGNPNRSRQRNLGQSIAAGLSNSFFDK  333
                V+GDD A        +   +   + +G +++  K +  +   ELK LG   R G  +R  EE  + A +PE  V +   S  R +G  I   + ++ F +
Subject   1117  VLGDDSAFMAAETMDLSVAAEDAAAVGMDLSDEKSISVEDATELKLLGVRYRDGHAFRETEEWFKLALYPEGDVPDIATSLTRLVGLWIGGAMWDTKFSR  1416

Pseudogymnoascus destructans virus isolate PdV80251 RNA-dependent RNA polymerase gene, complete cds

Sequence ID: Length: 1682 Number of Matches: 2

Range 1: 978 to 1076 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.9 bits(96) 0.0 17/33(52%) 0/33(0%) Minus/Plus
Query      433  HVFDFLHYYFKRTPILLPSGQLIKKAGGVPSGS  531
                +V+D + YYF  TP+L+P G++ +K  GVPSGS
Subject    978  NVWDAMVYYFINTPMLMPDGRMFRKRRGVPSGS  1076

Range 2: 1167 to 1466 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.9 bits(96) 0.0 28/100(28%) 0/100(0%) Minus/Plus
Query       34  VVGDDMATSVDHDFSIEEFSHYMSQLGFEINPSKVMFSDKGIELKFLGYSKRGGGLYRPIEELLQTAFFPEKYVGNPNRSRQRNLGQSIAAGLSNSFFDK  333
                V+GDD A    HDFS+++ S   + +   +NP K   +    + K LG +   G  +R   +  + A +PE  V + + S  R +G  +  G+ +  F K
Subject   1167  VLGDDSAFRSCHDFSLDQASADAAAVLMILNPDKCEVTLDPTKFKLLGTTYEDGHPHRETIDWFKFALYPESSVSSIDVSLTRLVGLWLGGGMWDLHFCK  1466

Gremmeniella abietina RNA virus MS1 RNA 1, complete genome

Sequence ID: Length: 1782 Number of Matches: 2

Range 1: 1224 to 1517 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.1 bits(103) 0.0 29/98(30%) 0/98(0%) Minus/Plus
Query       40  VVGDDMATSVDHDFSIEEFSHYMSQLGFEINPSKVMFSDKGIELKFLGYSKRGGGLYRPIEELLQTAFFPEKYVGNPNRSRQRNLGQSIAAGLSNSFF  333
                V+GDD A     +FS+E+        G  + P K   ++   + K LG + RG   +R   E  + A +PE  VGN   S  R +G  I   + +  F
Subject   1224  VLGDDSAFRSPVEFSLEQAQSDCEPTGMILKPEKCEKTEDPSDFKLLGTTYRGCHPHRDTNEWFKLALYPESRVGNLEVSLSRLVGLWIGGAMWDKEF  1517

Range 2: 1035 to 1133 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.5 bits(93) 0.0 17/33(52%) 0/33(0%) Minus/Plus
Query      433  HVFDFLHYYFKRTPILLPSGQLIKKAGGVPSGS  531
                +V+D + +YF  TPIL+P G++ +K  GVPSGS
Subject   1035  NVWDGMVWYFINTPILMPDGRMFRKRRGVPSGS  1133

Verticillium dahliae partitivirus 1 isolate Vd-253 segment RNA1, complete sequence

Sequence ID: Length: 1767 Number of Matches: 2

Range 1: 1194 to 1478 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.8 bits(98) 0.0 29/95(31%) 0/95(0%) Minus/Plus
Query       76  KKPDIIKMFVVGDDMATSVDHDFSIEEFSHYMSQLGFEINPSKVMFSDKGIELKFLGYSKRGGGLYRPIEELLQTAFFPEKYVGNPNRSRQRNLG  360
                ++ +I  + V+GDD A      F +E         G  I P K   +    E K LG + RGG ++R  EE  + A +PE  V   + S  R +G
Subject   1194  QRVEIRNLRVLGDDSAFCSGDQFDLELAKGDCEPTGMVIKPEKCERTKDPGEFKLLGTTYRGGHVFRDTEEWFKLALYPESSVLTLDISFTRLIG  1478

Range 2: 1032 to 1130 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.5 bits(93) 0.0 17/33(52%) 0/33(0%) Minus/Plus
Query      433  HVFDFLHYYFKRTPILLPSGQLIKKAGGVPSGS  531
                +V+D + +YF  TPIL+P G++ +K  GVPSGS
Subject   1032  NVWDAMVWYFINTPILMPDGRMFRKFRGVPSGS  1130

Xinzhou partiti-like virus 1 strain XZSJSC65291 segment Seg 1 RdRp gene, complete cds

Sequence ID: Length: 1523 Number of Matches: 3

Range 1: 752 to 892 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 20/47(43%) 0/47(0%) Minus/Plus
Query      592  PYPVGRNMTKALPFIIDNLLDDKKFGLVTDISKLDTSVGPDWIDWAF  732
                P  +G++M K LP+ ++ LL D  F    DIS  D+SV   +IDW F
Subject    752  PIYIGKDMFKELPYTLNRLLRDNFFAYCIDISAFDSSVNQIFIDWFF  892

Range 2: 1112 to 1366 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.5 bits(82) 0.0 22/85(26%) 0/85(0%) Minus/Plus
Query       94  IIKMFVVGDDMATSVDHDFSIEEFSHYMSQLGFEINPSKVMFSDKGIELKFLGYSKRGGGLYRPIEELLQTAFFPEKYVGNPNRS  348
                ++  +V+GDD      +   +E F     + GF++N  K + S    E+ FLG++  G  L R    L   A   E  + N +++
Subject   1112  VVPTYVLGDDSIFCHHNPNHLESFRVLFEEFGFKLNVRKTIVSKSSQEIVFLGHNFYGSRLTRDDFTLACLAIHTETPIVNSSQT  1366

Range 3: 947 to 1042 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.0 bits(70) 0.0 12/32(38%) 0/32(0%) Minus/Plus
Query      427  DFLHYYFKRTPILLPSGQLIKKAGGVPSGSGF  522
                D+  +  K TP+++P G++     G+PSGS F
Subject    947  DYCRFELKHTPVVMPDGKMYICHTGIPSGSYF  1042