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Queries

Nucleotide Sequence (351 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 11 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
36
72
108
144
180
216
252
288
324
351

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
194.9 194.9 33% 7.66e-55 76% ADO60926

Alignments

putative RNA-dependent RNA polymerase, partial [Grapevine associated chrysovirus-1]

Sequence ID: gb|ADO60926.1| Length: 957 Number of Matches: 1

Range 1: 308 to 423 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.9 bits(494) 0.0 88/116(76%) 0/116(0%) Minus/Plus
Query        3  LCCWKGILQNTQVAEVVKPWMGVNFSAWSDLMKSLHSYVRCSRFLMNTEISEQDRQALMYLDLNVGRGEYQIDEMAEVTVRSAETYSSKHLSYDSDLKLFTNEQYVTDFSRGIQLA  350
                L  WKGILQNT V  +VK WMGVNF  WSD+MKSLHSY+RCSRFLMNTEI+EQDRQ+LMY+DL VGRGEYQIDEMAEV++R ++TYSSKHLSY+ DLK FTNEQY+ DFSR +Q+A
Subject    308  LSAWKGILQNTSVNFIVKKWMGVNFHHWSDVMKSLHSYIRCSRFLMNTEITEQDRQSLMYMDLLVGRGEYQIDEMAEVSLRQSDTYSSKHLSYNPDLKAFTNEQYIKDFSRSVQIA  423

Nucleotide Sequence (340 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 11 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
34
68
102
136
170
204
238
272
306
340

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
176.4 176.4 29% 2.971e-48 81% ADO60926

Alignments

putative RNA-dependent RNA polymerase, partial [Grapevine associated chrysovirus-1]

Sequence ID: gb|ADO60926.1| Length: 957 Number of Matches: 1

Range 1: 632 to 731 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
176.4 bits(446) 0.0 81/100(81%) 0/100(0%) Minus/Plus
Query        4  GMVHELWRGLYSGWRGTTWINTVLNFVYVAIALMNLERITGKSVVLMVDHGGDDLDLCLSQPEMMPQVMEIMDNMLFKANKWKQMFGIRSEFFRSTISDA  303
                G +H+LWRGLYSGWRGTTWINTVLNF YV+IAL+N+ER+TG SVVLMVDHGGDDLDL LS+P +MP  +EIMDNMLFKANKWKQMFG RSEFFR+TIS A
Subject    632  GHLHKLWRGLYSGWRGTTWINTVLNFCYVSIALLNMERLTGVSVVLMVDHGGDDLDLVLSEPSVMPTFLEIMDNMLFKANKWKQMFGKRSEFFRNTISGA  731

Nucleotide Sequence (207 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 11 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
21
42
63
84
105
126
147
168
189
207

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
140.6 140.6 33% 2.986e-36 93% ADO60926

Alignments

putative RNA-dependent RNA polymerase, partial [Grapevine associated chrysovirus-1]

Sequence ID: gb|ADO60926.1| Length: 957 Number of Matches: 1

Range 1: 549 to 616 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
140.6 bits(353) 0.0 63/68(93%) 0/68(0%) Plus/Plus
Query        2  EQIGSVRLNAMGDGDIRYFDRKMSTGMFHVLYDWADFNEQHSAWEMAQVIKELENVMPDTPDYSMFCS  205
                EQIGSVRLNAMGDGDIRYFD+KMSTG FHVLYDWADFNEQHSAWEMAQVIKELE VMPDTPDY +FCS
Subject    549  EQIGSVRLNAMGDGDIRYFDKKMSTGTFHVLYDWADFNEQHSAWEMAQVIKELETVMPDTPDYHLFCS  616

Nucleotide Sequence (423 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 11 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
43
86
129
172
215
258
301
344
387
423

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
176.4 176.4 22% 1.042e-47 82% ADO60926

Alignments

putative RNA-dependent RNA polymerase, partial [Grapevine associated chrysovirus-1]

Sequence ID: gb|ADO60926.1| Length: 957 Number of Matches: 1

Range 1: 548 to 641 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
176.4 bits(446) 0.0 77/94(82%) 0/94(0%) Plus/Plus
Query      140  SKRIGSVRLNAMGDGDIRYFDRKMSTGMFHVLYDWADFNEQHSAWEMAEVIRELENVMPDTPDYSMFCSAIIEGMFRMGLEDREGMVHKLWRGL  421
                 ++IGSVRLNAMGDGDIRYFD+KMSTG FHVLYDWADFNEQHSAWEMA+VI+ELE VMPDTPDY +FCSAI+EGM+ MGL+D+EG +HKLWRGL
Subject    548  QEQIGSVRLNAMGDGDIRYFDKKMSTGTFHVLYDWADFNEQHSAWEMAQVIKELETVMPDTPDYHLFCSAIVEGMYEMGLQDKEGHLHKLWRGL  641

Nucleotide Sequence (510 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 11 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
51
102
153
204
255
306
357
408
459
510

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
133.7 133.7 31% 2.961e-32 39% ADO60926

Alignments

putative RNA-dependent RNA polymerase, partial [Grapevine associated chrysovirus-1]

Sequence ID: gb|ADO60926.1| Length: 957 Number of Matches: 1

Range 1: 1 to 158 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
133.7 bits(335) 0.0 62/158(39%) 1/158(1%) Plus/Plus
Query       38  LYAIVMPSGHGKTTLAERYGVIDVDNLVSKELHNKLVEWRVEILTNGETWKDHNKEWFNEVISTLNVMVINKPTVVLVHTEETALEIGAKILGGVQYTRGGLENSIARRSHIGKHFARLNLNTVNESRTFRPKICRSPDQ-IEEAFLKIMNENNLPVG  508
                ++A +MP+GHGKTT+A +YG +DVD LV+++ H+ L E R  IL   +TW +HN +W+  +  TL+++  + P ++LVHTEE ALE+GA+ +G ++  R   E +I  R  +GK F+RLN  T++ S+    +     ++ +E   LKI+N +N+P+ 
Subject      1  MFAFIMPAGHGKTTIAHKYGFVDVDMLVTRKEHDDLAEDRASILAGQQTWMEHNTKWYARLNQTLDLLDYSMPVIILVHTEEIALELGARPIGCLKLRRDIFETNIRDRDDLGKTFSRLNYTTLHTSKQVPNQFSNLTNRDLEGMILKILNLSNMPIA  158

Nucleotide Sequence (456 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 11 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
46
92
138
184
230
276
322
368
414
456

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
278.9 278.9 33% 1.772e-84 84% ADO60926

Alignments

putative RNA-dependent RNA polymerase, partial [Grapevine associated chrysovirus-1]

Sequence ID: gb|ADO60926.1| Length: 957 Number of Matches: 1

Range 1: 585 to 734 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
278.9 bits(712) 0.0 126/150(84%) 0/150(0%) Minus/Plus
Query        6  FNEQHSAWEMAQVIKELENVMPDTPDYSMFCSAIIEGMFRMGLEDREGMVHKLWRGLYSGWRGTTWINTVLNFVYVAIALMNLERITGKSVVLMVDHGGDDLDLCLSQPEMMPQFMEIMDNMLFKANKWKQMFGIRSEFFRNTISGARVH  455
                FNEQHSAWEMAQVIKELE VMPDTPDY +FCSAI+EGM+ MGL+D+EG +HKLWRGLYSGWRGTTWINTVLNF YV+IAL+N+ER+TG SVVLMVDHGGDDLDL LS+P +MP F+EIMDNMLFKANKWKQMFG RSEFFRNTISGARV+
Subject    585  FNEQHSAWEMAQVIKELETVMPDTPDYHLFCSAIVEGMYEMGLQDKEGHLHKLWRGLYSGWRGTTWINTVLNFCYVSIALLNMERLTGVSVVLMVDHGGDDLDLVLSEPSVMPTFLEIMDNMLFKANKWKQMFGKRSEFFRNTISGARVY  734

Nucleotide Sequence (686 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 11 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
69
138
207
276
345
414
483
552
621
686

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
407.1 407.1 33% 1.04e-131 82% ADO60926

Alignments

putative RNA-dependent RNA polymerase, partial [Grapevine associated chrysovirus-1]

Sequence ID: gb|ADO60926.1| Length: 957 Number of Matches: 1

Range 1: 684 to 909 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
407.1 bits(1045) 0.0 185/226(82%) 0/226(0%) Plus/Plus
Query        1  DDLDLCLSQPEMMPQFMEIMDNMLFKANKWKQMFGIRSEFFRNTISGARVYASPTRALAAFIAGDWEGAGRATIKERIVSLLDQIGKLKRRGVSNEMCQGFTMCCISHWCKVKDGEEWMNLPQAVLHGCEDQGGLGVPDANNQVWVLDKPVPEVNDEWYKVVVPGYKASKDYVKVLSEEIDRFSLAIERQDELARKLAEDSYDIDKAIDKMEWRKLLKFDGRPMRY  678
                DDLDL LS+P +MP F+EIMDNMLFKANKWKQMFG RSEFFRNTISGARVYASPTRALA+FIAGDWEGAGRAT+KER+VSLLDQIGKL+RRGVSNEMCQGFTM CISHWCK+KDGEEWMNLP+AVLHG E+QGGLGVPDA NQVW+LDK VPEVN+EWYKVVVP YKASKDYVKVLS+E+ RFS+ I+RQ+ELA+KLA DSYD+DK++D++ WRKLL+FDG+ + Y
Subject    684  DDLDLVLSEPSVMPTFLEIMDNMLFKANKWKQMFGKRSEFFRNTISGARVYASPTRALASFIAGDWEGAGRATVKERVVSLLDQIGKLRRRGVSNEMCQGFTMSCISHWCKIKDGEEWMNLPEAVLHGVEEQGGLGVPDAANQVWILDKNVPEVNEEWYKVVVPDYKASKDYVKVLSDEMARFSIVIQRQEELAQKLAVDSYDLDKSVDRIAWRKLLQFDGKAIAY  909

Nucleotide Sequence (426 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 11 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
43
86
129
172
215
258
301
344
387
426

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
193.4 193.4 33% 7.579e-54 67% ADO60926

Alignments

putative RNA-dependent RNA polymerase, partial [Grapevine associated chrysovirus-1]

Sequence ID: gb|ADO60926.1| Length: 957 Number of Matches: 1

Range 1: 15 to 155 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
193.4 bits(490) 0.0 95/142(67%) 1/142(1%) Minus/Plus
Query        1  LAHRYGFIDVDMLVTGREHDELAIDRAEILSGRQTWNAHNQRWYRRLNESLDLLDYSMPVIILVHTEELALELGAQVMGVLKLQRPQFEHNIRDRDTLGKRFSRMNVDNLVVSKDAPNKFLALQDNDALEAIILKMLNLSGM  426
                +AH+YGF+DVDMLVT +EHD+LA DRA IL+G+QTW  HN +WY RLN++LDLLDYSMPVIILVHTEE+ALELGA+ +G LKL+R  FE NIRDRD LGK FSR+N   L  SK  PN+F  L + D LE +ILK+LNLS M
Subject     15  IAHKYGFVDVDMLVTRKEHDDLAEDRASILAGQQTWMEHNTKWYARLNQTLDLLDYSMPVIILVHTEEIALELGARPIGCLKLRRDIFETNIRDRDDLGKTFSRLNYTTLHTSKQVPNQFSNLTNRD-LEGMILKILNLSNM  155

Nucleotide Sequence (414 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 11 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
42
84
126
168
210
252
294
336
378
414

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
201.4 201.4 32% 7.794e-57 70% ADO60926

Alignments

putative RNA-dependent RNA polymerase, partial [Grapevine associated chrysovirus-1]

Sequence ID: gb|ADO60926.1| Length: 957 Number of Matches: 1

Range 1: 2 to 133 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
201.4 bits(511) 0.0 92/132(70%) 0/132(0%) Plus/Plus
Query       19  FALVMPAGHGKTKLAHRYGFIDVDMLVTGREHDELAIDRAEILSGRQTWNAHNQRWYKRLNESLDLLDYSMPVIILVHTEELALELGAQVMGVLKLQRPQFERNIRDRDTLGKRFSRMNFDNLVVSKDAPNK  414
                FA +MPAGHGKT +AH+YGF+DVDMLVT +EHD+LA DRA IL+G+QTW  HN +WY RLN++LDLLDYSMPVIILVHTEE+ALELGA+ +G LKL+R  FE NIRDRD LGK FSR+N+  L  SK  PN+
Subject      2  FAFIMPAGHGKTTIAHKYGFVDVDMLVTRKEHDDLAEDRASILAGQQTWMEHNTKWYARLNQTLDLLDYSMPVIILVHTEEIALELGARPIGCLKLRRDIFETNIRDRDDLGKTFSRLNYTTLHTSKQVPNQ  133

Nucleotide Sequence (674 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 11 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
68
136
204
272
340
408
476
544
612
674

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
311.2 311.2 30% 2.717e-95 71% ADO60926

Alignments

putative RNA-dependent RNA polymerase, partial [Grapevine associated chrysovirus-1]

Sequence ID: gb|ADO60926.1| Length: 957 Number of Matches: 1

Range 1: 756 to 954 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
311.2 bits(796) 0.0 141/199(71%) 0/199(0%) Minus/Plus
Query       78  TIKERIVSLLDQVGKVKRRGVSNEMCQGFTMCCISHCSKVKDGEEWMNLPQAVLHGCEDQGGLGVPDANNQVWVLDKPVPEVNDEWYKVVVPGYKASKDYVKVLSEEIDKFSLAIERQDELAKKLAEDSYDIDKAIDRMEWRKLLSFSGRPMRYIDVIQPKENDAIFELFTEYQIDEQTTRRFDKASRYQEYIGYIVHE  674
                T+KER+VSLLDQ+GK++RRGVSNEMCQGFTM CISH  K+KDGEEWMNLP+AVLHG E+QGGLGVPDA NQVW+LDK VPEVN+EWYKVVVP YKASKDYVKVLS+E+ +FS+ I+RQ+ELA+KLA DSYD+DK++DR+ WRKLL F G+ + Y ++I+P  ND I   F ++QIDE+ TR+FDKASRYQEYI Y+  E
Subject    756  TVKERVVSLLDQIGKLRRRGVSNEMCQGFTMSCISHWCKIKDGEEWMNLPEAVLHGVEEQGGLGVPDAANQVWILDKNVPEVNEEWYKVVVPDYKASKDYVKVLSDEMARFSIVIQRQEELAQKLAVDSYDLDKSVDRIAWRKLLQFDGKAIAYRNIIEPMVNDDIMSSFVDFQIDEEMTRKFDKASRYQEYINYLTVE  954

Nucleotide Sequence (333 letters)

Query ID:ds2016-58_190
Query definition:No definition line
Query length:161
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 11 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
34
68
102
136
170
204
238
272
306
333

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
203.8 203.8 33% 3.134e-58 83% ADO60926

Alignments

putative RNA-dependent RNA polymerase, partial [Grapevine associated chrysovirus-1]

Sequence ID: gb|ADO60926.1| Length: 957 Number of Matches: 1

Range 1: 585 to 693 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
203.8 bits(517) 0.0 91/109(83%) 0/109(0%) Minus/Plus
Query        6  FNEQHSAWEMAQVIKELENVMPDTPDYSMFCSAIIEGMFRMGLEDREGMVHKLWRGLYSGWRGTTWINTVLNFVYVAIALMNLERITGKSVVLMVDHGGDDLDLCLSQP  332
                FNEQHSAWEMAQVIKELE VMPDTPDY +FCSAI+EGM+ MGL+D+EG +HKLWRGLYSGWRGTTWINTVLNF YV+IAL+N+ER+TG SVVLMVDHGGDDLDL LS+P
Subject    585  FNEQHSAWEMAQVIKELETVMPDTPDYHLFCSAIVEGMYEMGLQDKEGHLHKLWRGLYSGWRGTTWINTVLNFCYVSIALLNMERLTGVSVVLMVDHGGDDLDLVLSEP  693