Queries
Nucleotide Sequence (302 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
49.6 | 49.6 | 19% | 0.0001382 | 31% | HE579681.1 | |
49.6 | 49.6 | 19% | 0.0001382 | 31% | HE579703.1 | |
49.6 | 49.6 | 19% | 0.0001382 | 31% | HE579706.1 | |
49.6 | 49.6 | 19% | 0.0001382 | 31% | KP239989.1 | |
49.6 | 49.6 | 19% | 0.0001382 | 31% | NC_026136.1 |
Alignments
Uncultured endornavirus genomic RNA containing putative polyprotein, contig 139Pv1_454_1
Sequence ID: HE579681.1 Length: 4873 Number of Matches: 1
Range 1: 542 to 715 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
49.6 bits(102) | 0.0 | 18/58(31%) | 0/58(0%) | Plus/Plus |
Query 83 DAVDGKDANLRKRMEDMMLGDTKDALRGFTAKGALDHHNKKIIDSTIRLNTLHTYPIP 256 D + GK ++ K +++ ++GD A++ +G LD HN K+I+ ++ N + Y IP Subject 542 DFIFGKSNDIEKVLKNHIIGDVATAIKTQQVRGNLDLHNSKVINQLVKANAMRDYQIP 715
Uncultured endornavirus genomic RNA containing putative polyprotein, contig 63Hv1_454_1
Sequence ID: HE579703.1 Length: 9565 Number of Matches: 1
Range 1: 420 to 593 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
49.6 bits(102) | 0.0 | 18/58(31%) | 0/58(0%) | Plus/Plus |
Query 83 DAVDGKDANLRKRMEDMMLGDTKDALRGFTAKGALDHHNKKIIDSTIRLNTLHTYPIP 256 D + GK ++ K +++ ++GD A++ +G LD HN K+I+ ++ N + Y IP Subject 420 DFIFGKSNDIEKVLKNHIIGDVATAIKTQQVRGNLDLHNSKVINQLVKANAMRDYQIP 593
Uncultured endornavirus genomic RNA containing putative polyprotein, contig 71Pv1_454_1
Sequence ID: HE579706.1 Length: 2072 Number of Matches: 1
Range 1: 559 to 732 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
49.6 bits(102) | 0.0 | 18/58(31%) | 0/58(0%) | Plus/Plus |
Query 83 DAVDGKDANLRKRMEDMMLGDTKDALRGFTAKGALDHHNKKIIDSTIRLNTLHTYPIP 256 D + GK ++ K +++ ++GD A++ +G LD HN K+I+ ++ N + Y IP Subject 559 DFIFGKSNDIEKVLKNHIIGDVATAIKTQQVRGNLDLHNSKVINQLVKANAMRDYQIP 732
Alternaria brassicicola endornavirus isolate 1, complete genome
Sequence ID: KP239989.1 Length: 10290 Number of Matches: 1
Range 1: 1157 to 1330 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
49.6 bits(102) | 0.0 | 18/58(31%) | 0/58(0%) | Plus/Plus |
Query 83 DAVDGKDANLRKRMEDMMLGDTKDALRGFTAKGALDHHNKKIIDSTIRLNTLHTYPIP 256 D + GK ++ K +++ ++GD A++ +G LD HN K+I+ ++ N + Y IP Subject 1157 DFIFGKSNDIEKVLKNHIIGDVATAIKTQQVRGNLDLHNSKVINQLVKANAMRDYQIP 1330
Alternaria brassicicola endornavirus isolate 1, complete genome
Sequence ID: NC_026136.1 Length: 10290 Number of Matches: 1
Range 1: 1157 to 1330 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
49.6 bits(102) | 0.0 | 18/58(31%) | 0/58(0%) | Plus/Plus |
Query 83 DAVDGKDANLRKRMEDMMLGDTKDALRGFTAKGALDHHNKKIIDSTIRLNTLHTYPIP 256 D + GK ++ K +++ ++GD A++ +G LD HN K+I+ ++ N + Y IP Subject 1157 DFIFGKSNDIEKVLKNHIIGDVATAIKTQQVRGNLDLHNSKVINQLVKANAMRDYQIP 1330
Nucleotide Sequence (335 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
48.7 | 48.7 | 16% | 0.0003157 | 33% | HE579681.1 | |
48.7 | 48.7 | 16% | 0.0003157 | 33% | HE579685.1 | |
48.7 | 48.7 | 16% | 0.0003157 | 33% | HE579703.1 | |
48.7 | 48.7 | 16% | 0.0003157 | 33% | KP239989.1 | |
48.7 | 48.7 | 16% | 0.0003157 | 33% | NC_026136.1 |
Alignments
Uncultured endornavirus genomic RNA containing putative polyprotein, contig 139Pv1_454_1
Sequence ID: HE579681.1 Length: 4873 Number of Matches: 1
Range 1: 2015 to 2179 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.7 bits(100) | 0.0 | 18/55(33%) | 0/55(0%) | Minus/Plus |
Query 110 TADEYKLGPSHINEMLHDITQYEGLAHQIESRIPAAITYHNRNEIKVSWKDQKMD 274 T DEYK+ ++E+L D++ Y + + AAI+YH +N I +W + +D Subject 2015 TLDEYKMSHVTVSEVLKDVSMYTSGMQSMSKQNNAAISYHGQNRINATWVSKLLD 2179
Uncultured endornavirus genomic RNA containing putative polyprotein, contig 32.1Pv1_454_2
Sequence ID: HE579685.1 Length: 1702 Number of Matches: 1
Range 1: 1203 to 1367 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.7 bits(100) | 0.0 | 18/55(33%) | 0/55(0%) | Minus/Plus |
Query 110 TADEYKLGPSHINEMLHDITQYEGLAHQIESRIPAAITYHNRNEIKVSWKDQKMD 274 T DEYK+ ++E+L D++ Y + + AAI+YH +N I +W + +D Subject 1203 TLDEYKMSHVTVSEVLKDVSMYTSGMQSMSKQNNAAISYHGQNRINATWVSKLLD 1367
Uncultured endornavirus genomic RNA containing putative polyprotein, contig 63Hv1_454_1
Sequence ID: HE579703.1 Length: 9565 Number of Matches: 1
Range 1: 1893 to 2057 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.7 bits(100) | 0.0 | 18/55(33%) | 0/55(0%) | Minus/Plus |
Query 110 TADEYKLGPSHINEMLHDITQYEGLAHQIESRIPAAITYHNRNEIKVSWKDQKMD 274 T DEYK+ ++E+L D++ Y + + AAI+YH +N I +W + +D Subject 1893 TLDEYKMSHVTVSEVLKDVSMYTSGMQSMSKQNNAAISYHGQNRINATWVSKLLD 2057
Alternaria brassicicola endornavirus isolate 1, complete genome
Sequence ID: KP239989.1 Length: 10290 Number of Matches: 1
Range 1: 2630 to 2794 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.7 bits(100) | 0.0 | 18/55(33%) | 0/55(0%) | Minus/Plus |
Query 110 TADEYKLGPSHINEMLHDITQYEGLAHQIESRIPAAITYHNRNEIKVSWKDQKMD 274 T DEYK+ ++E+L D++ Y + + AAI+YH +N I +W + +D Subject 2630 TLDEYKMSHVTVSEVLKDVSMYTSGMQSMSKQNNAAISYHGQNRINATWVSKLLD 2794
Alternaria brassicicola endornavirus isolate 1, complete genome
Sequence ID: NC_026136.1 Length: 10290 Number of Matches: 1
Range 1: 2630 to 2794 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.7 bits(100) | 0.0 | 18/55(33%) | 0/55(0%) | Minus/Plus |
Query 110 TADEYKLGPSHINEMLHDITQYEGLAHQIESRIPAAITYHNRNEIKVSWKDQKMD 274 T DEYK+ ++E+L D++ Y + + AAI+YH +N I +W + +D Subject 2630 TLDEYKMSHVTVSEVLKDVSMYTSGMQSMSKQNNAAISYHGQNRINATWVSKLLD 2794
Nucleotide Sequence (415 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
94.5 | 148.3 | 18% | 7.383e-18 | 38% | HE579684.1 | |
91.3 | 146.9 | 18% | 6.819e-17 | 43% | HE579682.1 | |
91.3 | 146.9 | 18% | 6.819e-17 | 43% | HE579707.1 | |
90.0 | 90.0 | 19% | 1.768e-16 | 44% | KP239989.1 | |
90.0 | 90.0 | 19% | 1.768e-16 | 44% | NC_026136.1 |
Alignments
Uncultured endornavirus genomic RNA containing putative polyprotein, contig 32.1Pv1_454_1
Sequence ID: HE579684.1 Length: 7141 Number of Matches: 2
Range 1: 4848 to 5159 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
94.5 bits(200) | 0.0 | 40/104(38%) | 0/104(0%) | Plus/Plus |
Query 97 ECIVDEIGDRIPTSWVTDAVKQIVMPSFLERHGRSNSMPHLGGKNEILSKYWSRWLGMPSRAPITIDPTWKDVKHNMAFDATAQPKRMTNAFTHVNRDPSIKDT 408 E +V+EIGD + +V D VK+++ PS+ RH R+ S GG +IL KYWSR LG S P+ + TW DVKHN+ + + T +I+DT Subject 4848 EVLVEEIGDAKTSDYVRDTVKKLLYPSYFRRHARARSNASFGGAVDILGKYWSRLLGARSGNPVQLSETWNDVKHNLPLMVGQENQNSTKQGKKYKAFHTIRDT 5159
Range 2: 4847 to 5074 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.8 bits(111) | 0.0 | 32/76(42%) | 0/76(0%) | Minus/Minus |
Query 96 LCLTSFQVGSIVIGARLGIPNHRLQYLLKISFFPPRCGILLDLPCLSKKLGITICFTASVTQDVGMRSPISSTMHS 323 LC TSF V G L P++ QYL K+S PP CL K LG + FT S+T + SPISST S Subject 4847 LCFTSFHVSDNCTGLPLLAPSNLDQYLPKMSTAPPNDAFDRARACLRK*LGYSNFFTVSLT*SEVLASPISSTKTS 5074
Uncultured endornavirus genomic RNA containing putative polyprotein, contig 139Pv1_454_2
Sequence ID: HE579682.1 Length: 4542 Number of Matches: 2
Range 1: 2316 to 2546 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
91.3 bits(193) | 0.0 | 35/77(45%) | 0/77(0%) | Plus/Plus |
Query 97 ECIVDEIGDRIPTSWVTDAVKQIVMPSFLERHGRSNSMPHLGGKNEILSKYWSRWLGMPSRAPITIDPTWKDVKHNM 327 E +V+EIGD + +V D VK+++ PS+ RH R+ S GG +IL KYWSR LG S P+ + TW +VKHN+ Subject 2316 EVLVEEIGDAKTSDYVRDTVKKLLYPSYFRRHARARSNASFGGAVDILGKYWSRLLGARSGNPVQLSETWNEVKHNL 2546
Range 2: 2315 to 2542 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
55.6 bits(115) | 0.0 | 33/76(43%) | 0/76(0%) | Minus/Minus |
Query 96 LCLTSFQVGSIVIGARLGIPNHRLQYLLKISFFPPRCGILLDLPCLSKKLGITICFTASVTQDVGMRSPISSTMHS 323 LC TSF V G L P+ QYL K+S PP L CL K LG + FT S+T + SPISST S Subject 2315 LCFTSFHVSDNCTGLPLLAPSSLDQYLPKMSTAPPNDAFDRALACLRK*LGYSNFFTVSLT*SEVLASPISSTKTS 2542
Uncultured endornavirus genomic RNA containing putative polyprotein, contig 71Pv1_454_2
Sequence ID: HE579707.1 Length: 5637 Number of Matches: 2
Range 1: 3345 to 3575 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
91.3 bits(193) | 0.0 | 35/77(45%) | 0/77(0%) | Plus/Plus |
Query 97 ECIVDEIGDRIPTSWVTDAVKQIVMPSFLERHGRSNSMPHLGGKNEILSKYWSRWLGMPSRAPITIDPTWKDVKHNM 327 E +V+EIGD + +V D VK+++ PS+ RH R+ S GG +IL KYWSR LG S P+ + TW +VKHN+ Subject 3345 EVLVEEIGDAKTSDYVRDTVKKLLYPSYFRRHARARSNASFGGAVDILGKYWSRLLGARSGNPVQLSETWNEVKHNL 3575
Range 2: 3344 to 3571 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
55.6 bits(115) | 0.0 | 33/76(43%) | 0/76(0%) | Minus/Minus |
Query 96 LCLTSFQVGSIVIGARLGIPNHRLQYLLKISFFPPRCGILLDLPCLSKKLGITICFTASVTQDVGMRSPISSTMHS 323 LC TSF V G L P+ QYL K+S PP L CL K LG + FT S+T + SPISST S Subject 3344 LCFTSFHVSDNCTGLPLLAPSSLDQYLPKMSTAPPNDAFDRALACLRK*LGYSNFFTVSLT*SEVLASPISSTKTS 3571
Alternaria brassicicola endornavirus isolate 1, complete genome
Sequence ID: KP239989.1 Length: 10290 Number of Matches: 1
Range 1: 7988 to 8218 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.0 bits(190) | 0.0 | 34/77(44%) | 0/77(0%) | Plus/Plus |
Query 97 ECIVDEIGDRIPTSWVTDAVKQIVMPSFLERHGRSNSMPHLGGKNEILSKYWSRWLGMPSRAPITIDPTWKDVKHNM 327 E +V+EIGD + +V D VK+++ PS+ RH R+ S GG +IL KYWSR LG S P+ + TW ++KHN+ Subject 7988 EVLVEEIGDVRTSDYVRDTVKKLLYPSYFRRHARARSNASFGGAVDILGKYWSRLLGARSGNPVQLSETWNEIKHNL 8218
Alternaria brassicicola endornavirus isolate 1, complete genome
Sequence ID: NC_026136.1 Length: 10290 Number of Matches: 1
Range 1: 7988 to 8218 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.0 bits(190) | 0.0 | 34/77(44%) | 0/77(0%) | Plus/Plus |
Query 97 ECIVDEIGDRIPTSWVTDAVKQIVMPSFLERHGRSNSMPHLGGKNEILSKYWSRWLGMPSRAPITIDPTWKDVKHNM 327 E +V+EIGD + +V D VK+++ PS+ RH R+ S GG +IL KYWSR LG S P+ + TW ++KHN+ Subject 7988 EVLVEEIGDVRTSDYVRDTVKKLLYPSYFRRHARARSNASFGGAVDILGKYWSRLLGARSGNPVQLSETWNEIKHNL 8218
Nucleotide Sequence (306 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
100.0 | 100.0 | 28% | 9.485e-20 | 43% | HE579686.1 | |
100.0 | 100.0 | 28% | 9.485e-20 | 45% | KP239989.1 | |
100.0 | 100.0 | 28% | 9.485e-20 | 45% | NC_026136.1 | |
97.8 | 97.8 | 28% | 4.605e-19 | 41% | HE579707.1 | |
81.3 | 110.3 | 31% | 4.431e-17 | 42% | HE579703.1 |
Alignments
Uncultured endornavirus genomic RNA containing putative polyprotein, contig 32.1Pv1_cloning_1
Sequence ID: HE579686.1 Length: 563 Number of Matches: 1
Range 1: 104 to 364 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
100.0 bits(213) | 0.0 | 37/87(43%) | 0/87(0%) | Plus/Plus |
Query 9 TLDRIRPENHGSMERQVKEWADTRLVLLLKARYSDNNEIDATAEDWFINRDQSLFSQVKLPSEARIKHTLPIMQQTRQNITDIGHAP 269 T ++I P NH ME + WA+TRL L L+ D+NE ++TA DWF+N DQ+ ++++KLP+ K LP+ +Q++T +GHAP Subject 104 TGEKISPPNHAEMETMIDSWAETRLRLSLRMGTYDSNEPNSTAIDWFLNTDQTAYNEIKLPTNGSTKSRLPVYDNAKQHVTVVGHAP 364
Alternaria brassicicola endornavirus isolate 1, complete genome
Sequence ID: KP239989.1 Length: 10290 Number of Matches: 1
Range 1: 8669 to 8929 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
100.0 bits(213) | 0.0 | 39/87(45%) | 0/87(0%) | Plus/Plus |
Query 9 TLDRIRPENHGSMERQVKEWADTRLVLLLKARYSDNNEIDATAEDWFINRDQSLFSQVKLPSEARIKHTLPIMQQTRQNITDIGHAP 269 T ++I P NH ME + WA+TRL L L+ D+NE +ATA DWF+N DQ+ ++++KLP+ K LP+ +Q++T IGHAP Subject 8669 TGEKIGPSNHDEMETMIDLWAETRLRLSLRMGTYDSNEPNATAIDWFLNTDQTAYNEIKLPTNGSTKSRLPVYDNVKQHVTVIGHAP 8929
Alternaria brassicicola endornavirus isolate 1, complete genome
Sequence ID: NC_026136.1 Length: 10290 Number of Matches: 1
Range 1: 8669 to 8929 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
100.0 bits(213) | 0.0 | 39/87(45%) | 0/87(0%) | Plus/Plus |
Query 9 TLDRIRPENHGSMERQVKEWADTRLVLLLKARYSDNNEIDATAEDWFINRDQSLFSQVKLPSEARIKHTLPIMQQTRQNITDIGHAP 269 T ++I P NH ME + WA+TRL L L+ D+NE +ATA DWF+N DQ+ ++++KLP+ K LP+ +Q++T IGHAP Subject 8669 TGEKIGPSNHDEMETMIDLWAETRLRLSLRMGTYDSNEPNATAIDWFLNTDQTAYNEIKLPTNGSTKSRLPVYDNVKQHVTVIGHAP 8929
Uncultured endornavirus genomic RNA containing putative polyprotein, contig 71Pv1_454_2
Sequence ID: HE579707.1 Length: 5637 Number of Matches: 1
Range 1: 4026 to 4286 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
97.8 bits(208) | 0.0 | 36/87(41%) | 0/87(0%) | Plus/Plus |
Query 9 TLDRIRPENHGSMERQVKEWADTRLVLLLKARYSDNNEIDATAEDWFINRDQSLFSQVKLPSEARIKHTLPIMQQTRQNITDIGHAP 269 T ++I P NH ME + WA+TRL L+ D+NE ++TA DWF+N DQ+ ++++KLP+ K LP+ +Q++T +GHAP Subject 4026 TGEKISPSNHDEMETMIDSWAETRLRFSLRMGTYDSNEPNSTAIDWFLNTDQTAYNEIKLPTNGSSKSRLPVYDNAKQHVTVVGHAP 4286
Uncultured endornavirus genomic RNA containing putative polyprotein, contig 63Hv1_454_1
Sequence ID: HE579703.1 Length: 9565 Number of Matches: 2
Range 1: 7933 to 8151 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
81.3 bits(172) | 0.0 | 31/73(42%) | 0/73(0%) | Plus/Plus |
Query 9 TLDRIRPENHGSMERQVKEWADTRLVLLLKARYSDNNEIDATAEDWFINRDQSLFSQVKLPSEARIKHTLPIM 227 T ++I P NH ME + WA+TRL L L+ D+NE ++TA DWF+N DQ+ ++++KLP+ H P M Subject 7933 TGEKISPSNHDEMETMIDSWAETRLRLSLRMGTYDSNEPNSTAIDWFLNTDQTAYNEIKLPTNGSPSHACPCM 8151