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Queries

Nucleotide Sequence (122 letters)

Query ID:ds2015-149_49
Query definition:No definition line
Query length:122
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 18 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
13
26
39
52
65
78
91
104
117
122

Descriptions

Alignments

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: KY513701.1 Length: 6730 Number of Matches: 4

Range 1: 5625 to 5744 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.7 bits(209) 0.0 40/40(100%) 0/40(0%) Minus/Plus
Query        3  GTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSVPYQSAVF  122
                GTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSVPYQSAVF
Subject   5625  GTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSVPYQSAVF  5744

Range 2: 5627 to 5746 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.4 bits(167) 0.0 35/40(88%) 0/40(0%) Plus/Minus
Query        1  SKTADW*GTESIGSRFQKASPRE*PMENSVA*ERSFSSMV  120
                SKTADW GTES+GSRFQKASPRE PMENSVA*E SFSS+V
Subject   5627  SKTADWYGTESMGSRFQKASPREWPMENSVA*ESSFSSIV  5746

Range 3: 5627 to 5734 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.3 bits(99) 0.0 22/36(61%) 0/36(0%) Minus/Plus
Query       13  HH**EASFLCH*ILHRSLPWRRLLESASDRLCPLPV  120
                H+**EA+ LCH*+LHR L     LESA  RL P+PV
Subject   5627  HY**EAALLCH*VLHRPLSR*CFLESAPHRLSPIPV  5734

Range 4: 5625 to 5732 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.5 bits(94) 0.0 21/36(58%) 0/36(0%) Plus/Minus
Query       15  LVRDRVDRKQIPEGVAKGVTDGEFSGIRKKLLINGA  122
                LV D V  +QIPE + + V DGE SGIR++LLIN A
Subject   5625  LVWD*VYGEQIPESITERVADGELSGIREQLLINSA  5732

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: NC_034205.1 Length: 6730 Number of Matches: 4

Range 1: 5625 to 5744 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.7 bits(209) 0.0 40/40(100%) 0/40(0%) Minus/Plus
Query        3  GTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSVPYQSAVF  122
                GTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSVPYQSAVF
Subject   5625  GTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSVPYQSAVF  5744

Range 2: 5627 to 5746 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.4 bits(167) 0.0 35/40(88%) 0/40(0%) Plus/Minus
Query        1  SKTADW*GTESIGSRFQKASPRE*PMENSVA*ERSFSSMV  120
                SKTADW GTES+GSRFQKASPRE PMENSVA*E SFSS+V
Subject   5627  SKTADWYGTESMGSRFQKASPREWPMENSVA*ESSFSSIV  5746

Range 3: 5627 to 5734 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.3 bits(99) 0.0 22/36(61%) 0/36(0%) Minus/Plus
Query       13  HH**EASFLCH*ILHRSLPWRRLLESASDRLCPLPV  120
                H+**EA+ LCH*+LHR L     LESA  RL P+PV
Subject   5627  HY**EAALLCH*VLHRPLSR*CFLESAPHRLSPIPV  5734

Range 4: 5625 to 5732 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.5 bits(94) 0.0 21/36(58%) 0/36(0%) Plus/Minus
Query       15  LVRDRVDRKQIPEGVAKGVTDGEFSGIRKKLLINGA  122
                LV D V  +QIPE + + V DGE SGIR++LLIN A
Subject   5625  LVWD*VYGEQIPESITERVADGELSGIREQLLINSA  5732

Grapevine rupestris vein feathering virus isolate CHASS, complete genome

Sequence ID: KY513702.1 Length: 6716 Number of Matches: 4

Range 1: 5626 to 5745 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
96.8 bits(205) 0.0 39/40(98%) 0/40(0%) Minus/Plus
Query        3  GTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSVPYQSAVF  122
                GTIDEKLLSYATEFSIGHSLGDAFWNLLPI+SVPYQSAVF
Subject   5626  GTIDEKLLSYATEFSIGHSLGDAFWNLLPIESVPYQSAVF  5745

Range 2: 5628 to 5747 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.5 bits(154) 0.0 34/40(85%) 0/40(0%) Plus/Minus
Query        1  SKTADW*GTESIGSRFQKASPRE*PMENSVA*ERSFSSMV  120
                SKTAD *GT+S+GSRFQKASPRE*P+ENSVA E SFSSMV
Subject   5628  SKTAD**GTDSMGSRFQKASPRE*PIENSVAYESSFSSMV  5747

Range 3: 5626 to 5745 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.7 bits(121) 0.0 23/40(57%) 0/40(0%) Plus/Minus
Query        3  ENGGLVRDRVDRKQIPEGVAKGVTDGEFSGIRKKLLINGA  122
                ++ GL+RDR D +QIPEGV + +TD E SGIR++LL++GA
Subject   5626  KDSGLIRDRFDGEQIPEGVTERMTD*ELSGIREQLLVDGA  5745

Range 4: 5628 to 5738 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.6 bits(104) 0.0 21/37(57%) 0/37(0%) Minus/Plus
Query       10  HH**EASFLCH*ILHRSLPWRRLLESASDRLCPLPVR  120
                HH  EA+ +CH*+L+RS    RLLESA  R+CPL +R
Subject   5628  HHRREAALVCH*VLNRSFSR*RLLESAPHRICPLSIR  5738

Grapevine rupestris vein feathering virus isolate TRAJ3 BR polyprotein gene, partial cds

Sequence ID: KX828705.1 Length: 6549 Number of Matches: 4

Range 1: 5567 to 5686 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
95.5 bits(202) 0.0 38/40(95%) 0/40(0%) Minus/Plus
Query        3  GTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSVPYQSAVF  122
                GTIDEKLLSYATEFSIGHSLGD+FWNLLPI+SVPYQSAVF
Subject   5567  GTIDEKLLSYATEFSIGHSLGDSFWNLLPIESVPYQSAVF  5686

Range 2: 5569 to 5688 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.9 bits(155) 0.0 34/40(85%) 0/40(0%) Plus/Minus
Query        1  SKTADW*GTESIGSRFQKASPRE*PMENSVA*ERSFSSMV  120
                SKTAD  GT+SIGS+FQK SPRE*P+ENSVA*ERSFSSMV
Subject   5569  SKTAD*YGTDSIGSKFQKESPRE*PIENSVA*ERSFSSMV  5688

Range 3: 5567 to 5677 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
60.9 bits(128) 0.0 24/37(65%) 0/37(0%) Plus/Minus
Query       12  GLVRDRVDRKQIPEGVAKGVTDGEFSGIRKKLLINGA  122
                GL+R  +D KQ+PEGV KGVT+ EF G+R++LLINGA
Subject   5567  GLIRHGLDWKQVPEGVTKGVTNREFGGVREELLINGA  5677

Range 4: 5568 to 5678 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 22/37(59%) 0/37(0%) Minus/Plus
Query       11  APLMRSFFLMPLNSPSVTPLATPSGICFRSTLSLTSP  121
                APLMRS  L P NS  VTPL TPSG CF+S+    +P
Subject   5568  APLMRSSSLTPPNSLLVTPLVTPSGTCFQSSPCRINP  5678

Grapevine rupestris vein feathering virus replicase associated polyprotein mRNA, partial cds

Sequence ID: AY128949.1 Length: 1791 Number of Matches: 5

Range 1: 678 to 797 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.7 bits(196) 0.0 35/40(88%) 0/40(0%) Minus/Plus
Query        3  GTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSVPYQSAVF  122
                GTIDEK++SYATEFSIGHSLGDAFWNLLP+++VPYQSAVF
Subject    678  GTIDEKMISYATEFSIGHSLGDAFWNLLPLEAVPYQSAVF  797

Range 2: 680 to 799 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.0 bits(153) 0.0 34/40(85%) 0/40(0%) Plus/Minus
Query        1  SKTADW*GTESIGSRFQKASPRE*PMENSVA*ERSFSSMV  120
                SKTADW*GT S G RFQKASPRE PMENSVA*E  FSSMV
Subject    680  SKTADW*GTASRGRRFQKASPRECPMENSVA*EIIFSSMV  799

Range 3: 680 to 799 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.7 bits(124) 0.0 26/40(65%) 0/40(0%) Minus/Plus
Query        1  HH**EASFLCH*ILHRSLPWRRLLESASDRLCPLPVRRFR  120
                HH**+  FLCH ILHR+LPWR LLE  S   C LPV  FR
Subject    680  HH**KNDFLCHRILHRALPWRCLLEPPSS*GCALPVSGFR  799

Range 4: 678 to 797 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.3 bits(120) 0.0 24/40(60%) 0/40(0%) Plus/Minus
Query        3  ENGGLVRDRVDRKQIPEGVAKGVTDGEFSGIRKKLLINGA  122
                EN  LVR  + RK++PEG+AKGV DGEF GI     INGA
Subject    678  ENR*LVRHSLKRKEVPEGIAKGVPDGEFGGIGNHFFINGA  797

Range 5: 679 to 798 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.5 bits(106) 0.0 25/40(62%) 0/40(0%) Minus/Plus
Query        2  APLMRSFFLMPLNSPSVTPLATPSGICFRSTLSLTSPPFS  121
                APLM+  F MP NSPS TPLA PSG  F   L LTS  FS
Subject    679  APLMKK*FPMPPNSPSGTPLAMPSGTSFLLRLCLTSQRFS  798

Nucleotide Sequence (373 letters)

Query ID:ds2015-149_49
Query definition:No definition line
Query length:122
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 18 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
38
76
114
152
190
228
266
304
342
373

Descriptions

Alignments

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: KY513701.1 Length: 6730 Number of Matches: 8

Range 1: 1023 to 1394 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
299.8 bits(648) 0.0 119/124(96%) 0/124(0%) Minus/Plus
Query        2  ARDITRYPEVSTSPPECSTWFTHDSIMYLSAEGVAGCFQTCPHLERLYASLVVPPESSFTDLSFAPSLYRYRFHGDQLIYRLEENPSHSYQQPKSALKWLQTNSIQGNDIFLAITRLESWGPVH  373
                ARDITRYPEVST+PPECSTWF HDSIMYLSAE VAGCFQ CPHLERLYASLVVPPES+FTDLSFAPSLYRYRFHGDQLIYRLEENPSHSYQQPKSALKWLQTNSIQGNDIFLAITRLESWGPVH
Subject   1023  ARDITRYPEVSTTPPECSTWFMHDSIMYLSAEEVAGCFQACPHLERLYASLVVPPESAFTDLSFAPSLYRYRFHGDQLIYRLEENPSHSYQQPKSALKWLQTNSIQGNDIFLAITRLESWGPVH  1394

Range 2: 1025 to 1390 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
244.8 bits(528) 0.0 102/122(84%) 0/122(0%) Plus/Minus
Query        6  TGPQLSKRVMARNMSLPWMLLVCSHFRADLGCW*LCDGFSSRR*MSWSP*NR*R*REGAKDRSVKEDSGGTTSEAYKRSRWGQVWKHPATPSADRYMMESCVNQVLHSGGEVETSG*RVMSR  371
                TGPQLS+RVMAR MS PWMLLVCSHF ADLGCW*L +GFSSRR*MSWSP  R*R*REGAK+RSVK DSGGTT EA +RSRWG  WKHPAT SA+RYMMESC+N VLHSGG VETSG*RVMSR
Subject   1025  TGPQLSRRVMARKMSFPWMLLVCSHFSADLGCW*LWEGFSSRR*MSWSPWKR*R*REGAKERSVKADSGGTTREA*RRSRWGHAWKHPATSSAERYMMESCMNHVLHSGGVVETSG*RVMSR  1390

Range 3: 1026 to 1394 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
151.8 bits(325) 0.0 70/123(57%) 0/123(0%) Plus/Minus
Query        2  VNGTPTFQASDG*KYVIALDAVGLQPLQSRLGLLVTVRWILFKAIDELVAMKSIAVKRGGEGQISERGLRRDDQRSVQALKMGTSLEASSHSLCRQVHDGVMREPSAAFRR*GRDFWVASDVA  370
                V+ TP  Q  DG + VI LDAVGLQPLQ RLGLLV V  +LF+A++ELVA++++AVK  GEG++SE      ++RSV+AL++GT LEA S+   R+VHDGV+ EP AA R  G DF VA DVA
Subject   1026  VDRTPALQTCDGQEDVIPLDAVGLQPLQRRLGLLVAVGGVLFQAVNELVAVEAVAVKGRGEGEVSEGRFGGHNERSVEALEVGTRLEAPSNFFSREVHDGVVHEPRAALRGCGGDFGVAGDVA  1394

Range 4: 1027 to 1395 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.5 bits(309) 0.0 66/123(54%) 0/123(0%) Plus/Minus
Query        1  CERDPNFPSE*WLEICHCPGCCWFAATSEQTWAAGNCAMDSLQGDR*AGRHEIDSGKERGRRTDQ*KRTQEGRPAKRTSAQDGDKSGSIQPLPLPTGT*WSHA*TKCCIQEVR*RLLGSE*CR  369
                C +DP+ P  *W   CH  GCCW AATS QTWAAG+C   SL G +*AGR    SGK +GRR  Q*++ +  +  KR  A+ GD  GS Q L    GT*WS A*T CC Q V  RL GS *CR
Subject   1027  CGQDPSSPDV*WPGRCHSLGCCWSAATSAQTWAAGSCGRGSLPGGK*AGRRGSGSGKGKGRRRGQ*RQIRGAQREKRRGARGGDTPGSTQQLLQQRGT*WSRA*TTCCTQGVWWRLRGSG*CR  1395

Range 5: 1247 to 1387 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
81.7 bits(172) 0.0 32/47(68%) 0/47(0%) Minus/Plus
Query        9  RPAHLSP*RESIAQLPAAQVCSEVAANQQHPGQ*HISSHHSLGKLGS  149
                RPAHL P RE + QLPAAQVC+EVAA+QQHP +*H+  HH+ G+LGS
Subject   1247  RPAHLPPGREPLPQLPAAQVCAEVAADQQHPRE*HLPGHHTSGELGS  1387

Range 6: 1027 to 1170 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.5 bits(117) 0.0 29/48(60%) 0/48(0%) Minus/Plus
Query      226  ATSLATQKSLPHLLNAALGSRMTPSCTCRQREWLDASRLVPILSACTL  369
                ATS AT KS PH L+AA GS  TPSCT   ++ L ASR VP  SA TL
Subject   1027  ATSPATPKSPPHPLSAARGSCTTPSCTSLLKKLLGASRRVPTSSASTL  1170

Range 7: 1225 to 1386 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
66.1 bits(138) 0.0 32/54(59%) 0/54(0%) Minus/Plus
Query       10  FTAIDFMATSSSIALKRIHRTVTSSPSLL*SGCKPTASRAMTYF*PSLAWKVGV  171
                FTA    ATSS  A KR   T TSSPSL *SGC+PTAS+ MT   PS  W+ GV
Subject   1225  FTATASTATSSFTAWKRTPPTATSSPSLR*SGCRPTASKGMTSSWPSHVWRAGV  1386

Range 8: 1028 to 1174 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
42.8 bits(87) 0.0 29/49(59%) 0/49(0%) Minus/Plus
Query      222  RHHSLPRSLYLTS*MQXXXXXXXXXVPVGRGSGWMLPDLSPS*ALVRFA  368
                RHH LPRSL+ T *+QH+VHA LHHVP+   S W+LP +SP  A +RF+
Subject   1028  RHHPLPRSLHHTP*VQHVVHARLHHVPLC*RSCWVLPGVSPPRAPLRFS  1174

Grapevine rupestris vein feathering virus isolate CHASS, complete genome

Sequence ID: KY513702.1 Length: 6716 Number of Matches: 8

Range 1: 1024 to 1395 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
299.8 bits(648) 0.0 119/124(96%) 0/124(0%) Minus/Plus
Query        2  ARDITRYPEVSTSPPECSTWFTHDSIMYLSAEGVAGCFQTCPHLERLYASLVVPPESSFTDLSFAPSLYRYRFHGDQLIYRLEENPSHSYQQPKSALKWLQTNSIQGNDIFLAITRLESWGPVH  373
                ARDITRYPEVST+PPECSTWF HDSIMYLSAE VAGCFQ CPHLERLYASLVVPPES+FTDLSFAPSLYRYRFHGDQLIYRLEENPSHSYQQPKSALKWLQTNSIQGNDIFLAITRLESWGPVH
Subject   1024  ARDITRYPEVSTTPPECSTWFMHDSIMYLSAEEVAGCFQACPHLERLYASLVVPPESAFTDLSFAPSLYRYRFHGDQLIYRLEENPSHSYQQPKSALKWLQTNSIQGNDIFLAITRLESWGPVH  1395

Range 2: 1026 to 1391 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
235.7 bits(508) 0.0 102/122(84%) 0/122(0%) Plus/Minus
Query        6  TGPQLSKRVMARNMSLPWMLLVCSHFRADLGCW*LCDGFSSRR*MSWSP*NR*R*REGAKDRSVKEDSGGTTSEAYKRSRWGQVWKHPATPSADRYMMESCVNQVLHSGGEVETSG*RVMSR  371
                TGPQLSKRV+AR MSLP MLLVCSHFRADLGCW*L +GFSSRR*MSWSP  R*R* EGAK+RSVK DSGGTT EA +RSR GQ WKHPAT SA+RYMMESC+NQVLHSGG V+TSG*RVMSR
Subject   1026  TGPQLSKRVIARKMSLP*MLLVCSHFRADLGCW*LWEGFSSRR*MSWSPWKR*R*SEGAKERSVKADSGGTTREA*RRSR*GQAWKHPATSSAERYMMESCMNQVLHSGGVVDTSG*RVMSR  1391

Range 3: 1031 to 1387 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
137.2 bits(293) 0.0 62/119(52%) 0/119(0%) Plus/Minus
Query       10  DPNFPSE*WLEICHCPGCCWFAATSEQTWAAGNCAMDSLQGDR*AGRHEIDSGKERGRRTDQ*KRTQEGRPAKRTSAQDGDKSGSIQPLPLPTGT*WSHA*TKCCIQEVR*RLLGSE*C  366
                DP+ P+E*    CHCP CCWF ATSE  WAAGNC   S +GDR*AGR    SG+ +GRR  +*+ T E R  +R   Q  D+ GS +    P GT*WS A*TKCC Q     LL + *C
Subject   1031  DPSSPNE*SPGRCHCPECCWFVATSELIWAAGNCGRGSPRGDR*AGRRGSGSGRVKGRRRGR*RLTLEARQGRRRDVQGEDRLGSTRQPLQPRGT*WSRA*TKCCTQGGLWTLLDNG*C  1387

Range 4: 1030 to 1386 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
129.4 bits(276) 0.0 62/119(52%) 0/119(0%) Plus/Minus
Query       11  TPTFQASDG*KYVIALDAVGLQPLQSRLGLLVTVRWILFKAIDELVAMKSIAVKRGGEGQISERGLRRDDQRSVQALKMGTSLEASSHSLCRQVHDGVMREPSAAFRR*GRDFWVASDV  367
                TP  Q SD  + VIAL+AVGL PLQS  GLLVTV  +L +AIDELVA++++AV+  GEG++ E  L R D+  V+  K+ T LEA  +   R+VHDGV+ EPSAA R     FW+  DV
Subject   1030  TPALQTSDRQEDVIALNAVGL*PLQS*FGLLVTVGGVLLEAIDELVAVEAVAVE*RGEGEVGEG*LWRHDKGGVETFKVRTGLEAPGNLFSREVHDGVVHEPSAALRGGCGHFWITGDV  1386

Range 5: 1248 to 1388 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
77.1 bits(162) 0.0 32/47(68%) 0/47(0%) Minus/Plus
Query        9  RPAHLSP*RESIAQLPAAQVCSEVAANQQHPGQ*HISSHHSLGKLGS  149
                RPAHLSP  E + QLPAAQ+ SEVA NQQH GQ*H+   HS G+LGS
Subject   1248  RPAHLSPRGEPLPQLPAAQISSEVATNQQHSGQ*HLPGDHSFGELGS  1388

Range 6: 1031 to 1168 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.9 bits(72) 0.0 21/46(46%) 0/46(0%) Minus/Plus
Query      229  TSLATQKSLPHLLNAALGSRMTPSCTCRQREWLDASRLVPILSACT  366
                TS   QK     L+AALGS  TPSCT R +    AS+ V  L+  T
Subject   1031  TSPVIQKCPQPPLSAALGSCTTPSCTSRLKRLPGASKPVLTLNVST  1168

Range 7: 1229 to 1387 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.4 bits(132) 0.0 33/53(62%) 0/53(0%) Minus/Plus
Query       10  TAIDFMATSSSIALKRIHRTVTSSPSLL*SGCKPTASRAMTYF*PSLAWKVGV  168
                TA    ATSSSIA +R   TVTSSP+ L*SG KPTA RAMT    SL W+ GV
Subject   1229  TATASTATSSSIASRRTPPTVTSSPNQL*SGYKPTAFRAMTSSWRSLVWRAGV  1387

Range 8: 1032 to 1202 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.0 bits(57) 0.0 28/57(49%) 0/57(0%) Minus/Plus
Query      195  HHSLPRSLYLTS*MQXXXXXXXXXVPVGRGSGWMLPDLSPS*ALVRFAGRPS*VLFH  365
                HH L RS++   *+QHLVHA LHHVP+G     +LP LS  *  +R   R S V  H
Subject   1032  HHPLSRSVHNPP*VQHLVHARLHHVPLG*RGCRVLPSLSSP*TSLRLPCRASRVSLH  1202

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: NC_034205.1 Length: 6730 Number of Matches: 8

Range 1: 1023 to 1394 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
299.8 bits(648) 0.0 119/124(96%) 0/124(0%) Minus/Plus
Query        2  ARDITRYPEVSTSPPECSTWFTHDSIMYLSAEGVAGCFQTCPHLERLYASLVVPPESSFTDLSFAPSLYRYRFHGDQLIYRLEENPSHSYQQPKSALKWLQTNSIQGNDIFLAITRLESWGPVH  373
                ARDITRYPEVST+PPECSTWF HDSIMYLSAE VAGCFQ CPHLERLYASLVVPPES+FTDLSFAPSLYRYRFHGDQLIYRLEENPSHSYQQPKSALKWLQTNSIQGNDIFLAITRLESWGPVH
Subject   1023  ARDITRYPEVSTTPPECSTWFMHDSIMYLSAEEVAGCFQACPHLERLYASLVVPPESAFTDLSFAPSLYRYRFHGDQLIYRLEENPSHSYQQPKSALKWLQTNSIQGNDIFLAITRLESWGPVH  1394

Range 2: 1025 to 1390 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
244.8 bits(528) 0.0 102/122(84%) 0/122(0%) Plus/Minus
Query        6  TGPQLSKRVMARNMSLPWMLLVCSHFRADLGCW*LCDGFSSRR*MSWSP*NR*R*REGAKDRSVKEDSGGTTSEAYKRSRWGQVWKHPATPSADRYMMESCVNQVLHSGGEVETSG*RVMSR  371
                TGPQLS+RVMAR MS PWMLLVCSHF ADLGCW*L +GFSSRR*MSWSP  R*R*REGAK+RSVK DSGGTT EA +RSRWG  WKHPAT SA+RYMMESC+N VLHSGG VETSG*RVMSR
Subject   1025  TGPQLSRRVMARKMSFPWMLLVCSHFSADLGCW*LWEGFSSRR*MSWSPWKR*R*REGAKERSVKADSGGTTREA*RRSRWGHAWKHPATSSAERYMMESCMNHVLHSGGVVETSG*RVMSR  1390

Range 3: 1026 to 1394 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
151.8 bits(325) 0.0 70/123(57%) 0/123(0%) Plus/Minus
Query        2  VNGTPTFQASDG*KYVIALDAVGLQPLQSRLGLLVTVRWILFKAIDELVAMKSIAVKRGGEGQISERGLRRDDQRSVQALKMGTSLEASSHSLCRQVHDGVMREPSAAFRR*GRDFWVASDVA  370
                V+ TP  Q  DG + VI LDAVGLQPLQ RLGLLV V  +LF+A++ELVA++++AVK  GEG++SE      ++RSV+AL++GT LEA S+   R+VHDGV+ EP AA R  G DF VA DVA
Subject   1026  VDRTPALQTCDGQEDVIPLDAVGLQPLQRRLGLLVAVGGVLFQAVNELVAVEAVAVKGRGEGEVSEGRFGGHNERSVEALEVGTRLEAPSNFFSREVHDGVVHEPRAALRGCGGDFGVAGDVA  1394

Range 4: 1027 to 1395 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.5 bits(309) 0.0 66/123(54%) 0/123(0%) Plus/Minus
Query        1  CERDPNFPSE*WLEICHCPGCCWFAATSEQTWAAGNCAMDSLQGDR*AGRHEIDSGKERGRRTDQ*KRTQEGRPAKRTSAQDGDKSGSIQPLPLPTGT*WSHA*TKCCIQEVR*RLLGSE*CR  369
                C +DP+ P  *W   CH  GCCW AATS QTWAAG+C   SL G +*AGR    SGK +GRR  Q*++ +  +  KR  A+ GD  GS Q L    GT*WS A*T CC Q V  RL GS *CR
Subject   1027  CGQDPSSPDV*WPGRCHSLGCCWSAATSAQTWAAGSCGRGSLPGGK*AGRRGSGSGKGKGRRRGQ*RQIRGAQREKRRGARGGDTPGSTQQLLQQRGT*WSRA*TTCCTQGVWWRLRGSG*CR  1395

Range 5: 1247 to 1387 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
81.7 bits(172) 0.0 32/47(68%) 0/47(0%) Minus/Plus
Query        9  RPAHLSP*RESIAQLPAAQVCSEVAANQQHPGQ*HISSHHSLGKLGS  149
                RPAHL P RE + QLPAAQVC+EVAA+QQHP +*H+  HH+ G+LGS
Subject   1247  RPAHLPPGREPLPQLPAAQVCAEVAADQQHPRE*HLPGHHTSGELGS  1387

Range 6: 1027 to 1170 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.5 bits(117) 0.0 29/48(60%) 0/48(0%) Minus/Plus
Query      226  ATSLATQKSLPHLLNAALGSRMTPSCTCRQREWLDASRLVPILSACTL  369
                ATS AT KS PH L+AA GS  TPSCT   ++ L ASR VP  SA TL
Subject   1027  ATSPATPKSPPHPLSAARGSCTTPSCTSLLKKLLGASRRVPTSSASTL  1170

Range 7: 1225 to 1386 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
66.1 bits(138) 0.0 32/54(59%) 0/54(0%) Minus/Plus
Query       10  FTAIDFMATSSSIALKRIHRTVTSSPSLL*SGCKPTASRAMTYF*PSLAWKVGV  171
                FTA    ATSS  A KR   T TSSPSL *SGC+PTAS+ MT   PS  W+ GV
Subject   1225  FTATASTATSSFTAWKRTPPTATSSPSLR*SGCRPTASKGMTSSWPSHVWRAGV  1386

Range 8: 1028 to 1174 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
42.8 bits(87) 0.0 29/49(59%) 0/49(0%) Minus/Plus
Query      222  RHHSLPRSLYLTS*MQXXXXXXXXXVPVGRGSGWMLPDLSPS*ALVRFA  368
                RHH LPRSL+ T *+QH+VHA LHHVP+   S W+LP +SP  A +RF+
Subject   1028  RHHPLPRSLHHTP*VQHVVHARLHHVPLC*RSCWVLPGVSPPRAPLRFS  1174

Grapevine rupestris vein feathering virus isolate TRAJ3 BR polyprotein gene, partial cds

Sequence ID: KX828705.1 Length: 6549 Number of Matches: 7

Range 1: 965 to 1336 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
292.0 bits(631) 0.0 115/124(93%) 0/124(0%) Minus/Plus
Query        2  ARDITRYPEVSTSPPECSTWFTHDSIMYLSAEGVAGCFQTCPHLERLYASLVVPPESSFTDLSFAPSLYRYRFHGDQLIYRLEENPSHSYQQPKSALKWLQTNSIQGNDIFLAITRLESWGPVH  373
                ARDITRYPEVST+PPECSTWF HD+IMYLSAE VAGCF+ CPHLERLYASLVVPPES+FTDLS APSLYRYRFHGDQLIYRLEENPSHSYQQPKSALKWLQTNSIQGN+IFLAITRLESWGPVH
Subject    965  ARDITRYPEVSTAPPECSTWFMHDAIMYLSAEEVAGCFEACPHLERLYASLVVPPESAFTDLSLAPSLYRYRFHGDQLIYRLEENPSHSYQQPKSALKWLQTNSIQGNNIFLAITRLESWGPVH  1336

Range 2: 967 to 1335 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
226.5 bits(488) 0.0 98/123(80%) 0/123(0%) Plus/Minus
Query        3  *TGPQLSKRVMARNMSLPWMLLVCSHFRADLGCW*LCDGFSSRR*MSWSP*NR*R*REGAKDRSVKEDSGGTTSEAYKRSRWGQVWKHPATPSADRYMMESCVNQVLHSGGEVETSG*RVMSR  371
                *TGPQLSKRV+AR M  PWMLLV SH  ADLGCW*L DGFSSRR*MSWSP  R*R*REGA++RSVK DSGGTT EA +RSRWGQ  KHPAT SA+RYMM SC+N VLHSGG VETSG*RV+SR
Subject    967  *TGPQLSKRVIARKMLFPWMLLVWSHLSADLGCW*LWDGFSSRR*MSWSPWKR*R*REGARERSVKADSGGTTREA*RRSRWGQASKHPATSSAERYMMASCMNHVLHSGGAVETSG*RVISR  1335

Range 3: 971 to 1336 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
158.2 bits(339) 0.0 70/122(57%) 0/122(0%) Plus/Minus
Query        2  VNGTPTFQASDG*KYVIALDAVGLQPLQSRLGLLVTVRWILFKAIDELVAMKSIAVKRGGEGQISERGLRRDDQRSVQALKMGTSLEASSHSLCRQVHDGVMREPSAAFRR*GRDFWVASDV  367
                VNGTP FQASD  + VI LDAVGL+PL+  LGLLV V  +L +A+DELVAM+++AVKRG EG++ E   RR D+RS++A ++G  LEASS  L R++HDG++ EP AA RR   D  VASD+
Subject    971  VNGTPAFQASDRQEDVIPLDAVGLEPLKR*LGLLVAVGRVLLEAVDELVAMEAVAVKRGSEGEVGEG*FRRHDERSIEAFQVGAGLEASSDFLGREIHDGIVHEPCAALRRGRGDLGVASDI  1336

Range 4: 975 to 1337 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
129.8 bits(277) 0.0 62/121(51%) 0/121(0%) Plus/Minus
Query        1  CERDPNFPSE*WLEICHCPGCCWFAATSEQTWAAGNCAMDSLQGDR*AGRHEIDSGKERGRRTDQ*KRTQEGRPAKRTSAQDGDKSGSIQPLPLPTGT*WSHA*TKCCIQEVR*RLLGSE*  363
                CERDP+FPSE*    C+ PGCCW  AT   TWA G+C   S +G R*AGRH   SGKER R   +*+     R  K      G +  SIQ LP P  T*W  A*T CC QE   R  GSE*
Subject    975  CERDPSFPSE*SPGRCYSPGCCWSGAT*ALTWAVGSCGTGSPRGGR*AGRHGSGSGKERERGRGR*RLIPAARREKHRGVPGGGRPRSIQRLPRPRDT*WHRA*TMCCTQEGPWRPRGSE*  1337

Range 5: 973 to 1335 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.4 bits(239) 0.0 67/121(55%) 0/121(0%) Minus/Plus
Query        3  HHSLPRSLYLTS*MQXXXXXXXXXVPVGRGSGWMLPDLSPS*ALVRFAGRPS*VLFHXXXXXXXXXXXXXSWRPAHLSP*RESIAQLPAAQVCSEVAANQQHPGQ*HISSHHSLGKLGSRS  365
                +HSLPR L+  S*+QH+VHA  HHV +GRGS WML  L P    + F+ R + +  H  + R LSLPL + WRPAHL P  E + QLP AQV + VA +QQHPG+*H+   HSLGKLGSRS
Subject    973  YHSLPRGLHGPS*VQHMVHARCHHVSLGRGSRWMLRGLPPPGTPLCFSRRAAGISLHRPLPRSLSLPLPLPWRPAHLPPRGEPVPQLPTAQVSA*VAPDQQHPGE*HLPGDHSLGKLGSRS  1335

Range 6: 1167 to 1337 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.3 bits(147) 0.0 34/57(60%) 0/57(0%) Minus/Plus
Query        1  FTAIDFMATSSSIALKRIHRTVTSSPSLL*SGCKPTASRAMTYF*PSLAWKVGVPFT  171
                FTA   MATSSS A +R   T T+SPS   SG +PTASR +T    SLAWK GVPFT
Subject   1167  FTATASMATSSSTASRRTRPTATNSPSQRLSGSRPTASRGITSSWRSLAWKAGVPFT  1337

Range 7: 975 to 1112 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
44.1 bits(90) 0.0 24/46(52%) 0/46(0%) Minus/Plus
Query      226  SLATQKSLPHLLNAALGSRMTPSCTCRQREWLDASRLVPILSACTL  363
                SLAT +S   LL+AA GS   PSC  R R+ LDASR  P  +A  L
Subject    975  SLATPRSPRPLLSAAHGSCTMPSCISRPRKSLDASRPAPTWNASML  1112

Grapevine rupestris vein feathering virus polyprotein gene, complete cds

Sequence ID: AY706994.1 Length: 6617 Number of Matches: 9

Range 1: 1017 to 1388 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
289.3 bits(625) 0.0 114/124(92%) 0/124(0%) Minus/Plus
Query        2  ARDITRYPEVSTSPPECSTWFTHDSIMYLSAEGVAGCFQTCPHLERLYASLVVPPESSFTDLSFAPSLYRYRFHGDQLIYRLEENPSHSYQQPKSALKWLQTNSIQGNDIFLAITRLESWGPVH  373
                ARDITRYPE S +PPECSTWF HDSIMYLSAE VAGCFQ CPHLERLYASL+VPPESSFTDLS  PSLYRYRFHGDQLIYRLEENPSHSYQQPK+ALKWLQTNSIQGNDIFLAITRLESWGPVH
Subject   1017  ARDITRYPETSPTPPECSTWFMHDSIMYLSAEEVAGCFQACPHLERLYASLIVPPESSFTDLSLNPSLYRYRFHGDQLIYRLEENPSHSYQQPKAALKWLQTNSIQGNDIFLAITRLESWGPVH  1388

Range 2: 1019 to 1387 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
206.8 bits(445) 0.0 91/123(74%) 0/123(0%) Plus/Minus
Query        3  *TGPQLSKRVMARNMSLPWMLLVCSHFRADLGCW*LCDGFSSRR*MSWSP*NR*R*REGAKDRSVKEDSGGTTSEAYKRSRWGQVWKHPATPSADRYMMESCVNQVLHSGGEVETSG*RVMSR  371
                *TGPQLS+RV+AR +S PWMLLVCSH RA LGCW*L DGFSS R*+S SP  R  * EG ++RSVKEDSGGT  EA   SRWGQ WK PAT SA+RYMMESC+NQVLHSGG  E SG*RVMSR
Subject   1019  *TGPQLSRRVIARKISFPWMLLVCSHLRAALGCW*L*DGFSSSR*IS*SPWKRYL*SEGLRERSVKEDSGGTMREA*SLSRWGQAWKQPATSSAERYMMESCMNQVLHSGGVGEVSG*RVMSR  1387

Range 3: 1017 to 1388 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
153.7 bits(329) 0.0 65/124(52%) 0/124(0%) Plus/Minus
Query        2  VNGTPTFQASDG*KYVIALDAVGLQPLQSRLGLLVTVRWILFKAIDELVAMKSIAVKRGGEGQISERGLRRDDQRSVQALKMGTSLEASSHSLCRQVHDGVMREPSAAFRR*GRDFWVASDVAG  373
                VNGTPT  ASD  K ++ LDAVGLQPL+S LGLLV VR +  + +++L+ ++++ V+RG EG++ E GLRRDD+R +++L++G  LEA+SH    +VHDGVM EP A  RR  R   V  DVAG
Subject   1017  VNGTPTL*ASDCEKDIVPLDAVGLQPLESSLGLLVAVRRVFLEPVNQLITVEAVPVERGVEGEVCEGGLRRDDERGIKSLEVGAGLEAASHFFSGEVHDGVMHEPGATLRRGRRGLRVTGDVAG  1388

Range 4: 1279 to 1389 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.3 bits(121) 0.0 23/37(62%) 0/37(0%) Plus/Minus
Query        1  CERDPNFPSE*WLEICHCPGCCWFAATSEQTWAAGNC  111
                CERDPN   E*  E     GCCWFAAT EQ WA G+C
Subject   1279  CERDPNSLGE*LRERYRSLGCCWFAAT*EQPWAVGSC  1389

Range 5: 1018 to 1221 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.4 bits(119) 0.0 31/68(46%) 0/68(0%) Plus/Minus
Query      169  KERGRRTDQ*KRTQEGRPAKRTSAQDGDKSGSIQPLPLPTGT*WSHA*TKCCIQEVR*RLLGSE*CRG  372
                + RG     *+RT EGR  +   ++ G + GS QPL    GT*WSHA*T+C   E   R  G+ *CRG
Subject   1018  RARG*GRGL*RRTPEGR*ERHKVSRGGGRLGSSQPLLQRRGT*WSHA*TRCYTPEG*ERSQGNG*CRG  1221

Range 6: 1264 to 1389 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.8 bits(111) 0.0 24/42(57%) 0/42(0%) Minus/Plus
Query        1  KRIHRTVTSSPSLL*SGCKPTASRAMTYF*PSLAWKVGVPFT  126
                ++   T T+SP LL SGCKPTAS+    F  SLA +VGVPFT
Subject   1264  RKTRLTATNSPRLLSSGCKPTASKGTISFSQSLA*RVGVPFT  1389

Range 7: 1018 to 1143 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
44.6 bits(91) 0.0 21/42(50%) 0/42(0%) Minus/Plus
Query      247  PATSLATQKSLPHLLNAALGSRMTPSCTCRQREWLDASRLVP  372
                PATS  T + L  L + A GS MTPSCT   ++WL AS+  P
Subject   1018  PATSPVTLRPLLPLRSVAPGSCMTPSCTSPLKKWLAASKPAP  1143

Range 8: 1274 to 1387 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.4 bits(119) 0.0 23/38(61%) 0/38(0%) Minus/Plus
Query        3  IAQLPAAQVCSEVAANQQHPGQ*HISSHHSLGKLGSRS  116
                ++QLP AQ CS+VAANQQHP + ++S +HS  +LGSRS
Subject   1274  VSQLPTAQGCSQVAANQQHPRERYLSRNHSPRELGSRS  1387

Range 9: 1115 to 1195 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
31.3 bits(62) 0.0 13/27(48%) 0/27(0%) Minus/Plus
Query      195  SGWMLPDLSPS*ALVRFAGRPS*VLFH  275
                SGW+LP L P    +  + RPS VL H
Subject   1115  SGWLLPSLPPPRETLCLSHRPSGVLLH  1195

Nucleotide Sequence (124 letters)

Query ID:ds2015-149_49
Query definition:No definition line
Query length:122
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 18 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
13
26
39
52
65
78
91
104
117
124

Descriptions

Alignments

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: KY513701.1 Length: 6730 Number of Matches: 5

Range 1: 5775 to 5897 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
96.4 bits(204) 0.0 41/41(100%) 0/41(0%) Plus/Plus
Query        1  IKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSLQRRAL  123
                IKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSLQRRAL
Subject   5775  IKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSLQRRAL  5897

Range 2: 5777 to 5893 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.5 bits(117) 0.0 28/39(72%) 0/39(0%) Minus/Minus
Query        3  ALRWRELSME*VE*DSQDSLWSR*ENRETSTRPNLNMTL  119
                A R RELSME*VE +SQ+SL SR E  ETSTRP+LN+TL
Subject   5777  ARRCRELSME*VEYESQESL*SRWEKSETSTRPSLNITL  5893

Range 3: 5775 to 5897 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.0 bits(118) 0.0 22/41(54%) 0/41(0%) Minus/Minus
Query        1  QSSALERIEHGVSGVGQPRQLVEQMREQGDFDATQLEHDLD  123
                + + L+ +EHGV GV +P +LV+Q+ E+ DFD TQLEH+LD
Subject   5775  ERTTLQGVEHGVGGV*EPGELVKQVGEK*DFDTTQLEHNLD  5897

Range 4: 5776 to 5874 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.3 bits(97) 0.0 21/33(64%) 0/33(0%) Plus/Plus
Query        2  SRSCSSWVASKSPCSLICSTSCLGCPTPLTPCS  100
                SR CSSWV SKS  S  C TS  G  TP TPCS
Subject   5776  SRLCSSWVVSKSHFSPTCFTSSPGSHTPPTPCS  5874

Range 5: 5776 to 5877 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.9 bits(96) 0.0 21/34(62%) 0/34(0%) Minus/Minus
Query        2  N*AWSKWSRTAKTACGADERTGRLRRDPT*T*P*  103
                +*AWS+WS  A+ AC A  R  RLR DP *T*P*
Subject   5776  S*AWSRWSMRARRACEAGGRKVRLRHDPA*T*P*  5877

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: NC_034205.1 Length: 6730 Number of Matches: 5

Range 1: 5775 to 5897 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
96.4 bits(204) 0.0 41/41(100%) 0/41(0%) Plus/Plus
Query        1  IKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSLQRRAL  123
                IKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSLQRRAL
Subject   5775  IKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSLQRRAL  5897

Range 2: 5777 to 5893 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.5 bits(117) 0.0 28/39(72%) 0/39(0%) Minus/Minus
Query        3  ALRWRELSME*VE*DSQDSLWSR*ENRETSTRPNLNMTL  119
                A R RELSME*VE +SQ+SL SR E  ETSTRP+LN+TL
Subject   5777  ARRCRELSME*VEYESQESL*SRWEKSETSTRPSLNITL  5893

Range 3: 5775 to 5897 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.0 bits(118) 0.0 22/41(54%) 0/41(0%) Minus/Minus
Query        1  QSSALERIEHGVSGVGQPRQLVEQMREQGDFDATQLEHDLD  123
                + + L+ +EHGV GV +P +LV+Q+ E+ DFD TQLEH+LD
Subject   5775  ERTTLQGVEHGVGGV*EPGELVKQVGEK*DFDTTQLEHNLD  5897

Range 4: 5776 to 5874 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.3 bits(97) 0.0 21/33(64%) 0/33(0%) Plus/Plus
Query        2  SRSCSSWVASKSPCSLICSTSCLGCPTPLTPCS  100
                SR CSSWV SKS  S  C TS  G  TP TPCS
Subject   5776  SRLCSSWVVSKSHFSPTCFTSSPGSHTPPTPCS  5874

Range 5: 5776 to 5877 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.9 bits(96) 0.0 21/34(62%) 0/34(0%) Minus/Minus
Query        2  N*AWSKWSRTAKTACGADERTGRLRRDPT*T*P*  103
                +*AWS+WS  A+ AC A  R  RLR DP *T*P*
Subject   5776  S*AWSRWSMRARRACEAGGRKVRLRHDPA*T*P*  5877

Grapevine rupestris vein feathering virus isolate TRAJ3 BR polyprotein gene, partial cds

Sequence ID: KX828705.1 Length: 6549 Number of Matches: 5

Range 1: 5717 to 5839 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
95.9 bits(203) 0.0 40/41(98%) 0/41(0%) Plus/Plus
Query        1  IKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSLQRRAL  123
                IKVMFKLGRVE+SLFSHLLHKLSWLSYSTYSMLNSLQRRAL
Subject   5717  IKVMFKLGRVEISLFSHLLHKLSWLSYSTYSMLNSLQRRAL  5839

Range 2: 5719 to 5835 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.9 bits(131) 0.0 31/39(79%) 0/39(0%) Minus/Minus
Query        3  ALRWRELSME*VE*DSQDSLWSR*ENRETSTRPNLNMTL  119
                A R RELSME*VE*DSQ+SL SR*E RE STRP+LN+TL
Subject   5719  ARRCRELSME*VE*DSQESL*SR*EKREISTRPSLNITL  5835

Range 3: 5717 to 5839 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.7 bits(133) 0.0 25/41(61%) 0/41(0%) Minus/Minus
Query        1  QSSALERIEHGVSGVGQPRQLVEQMREQGDFDATQLEHDLD  123
                + + L+RIEHGVSGV QP +LV+QMRE+ D DA +LEH  D
Subject   5717  ERATLQRIEHGVSGVRQPGELVKQMREERDLDAAELEHHFD  5839

Range 4: 5718 to 5822 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.8 bits(111) 0.0 24/35(69%) 0/35(0%) Plus/Plus
Query        2  SRSCSSWVASKSPCSLICSTSCLGCPTPLTPCSIL  106
                S+ CSS  AS+S  SLIC TS  GC TPLTPCSIL
Subject   5718  SK*CSSSAASRSLSSLICFTSSPGCLTPLTPCSIL  5822

Range 5: 5727 to 5822 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.9 bits(107) 0.0 22/32(69%) 0/32(0%) Minus/Minus
Query       11  EN*AWSKWSRTAKTACGADERTGRLRRDPT*T  106
                EN*AWSKWS+TA+ AC ADER  R RR   *T
Subject   5727  EN*AWSKWSKTARRACEADERRERSRRGRA*T  5822

Grapevine rupestris vein feathering virus isolate CHASS, complete genome

Sequence ID: KY513702.1 Length: 6716 Number of Matches: 5

Range 1: 5776 to 5898 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
95.0 bits(201) 0.0 40/41(98%) 0/41(0%) Plus/Plus
Query        1  IKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSLQRRAL  123
                IKVMFKLGRVEVSLFSHLLH+LSWLSYSTYSMLNSLQRRAL
Subject   5776  IKVMFKLGRVEVSLFSHLLHRLSWLSYSTYSMLNSLQRRAL  5898

Range 2: 5778 to 5897 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.3 bits(147) 0.0 32/40(80%) 0/40(0%) Minus/Minus
Query        3  RALRWRELSME*VE*DSQDSLWSR*ENRETSTRPNLNMTL  122
                RA RWRELSME*VE +SQ+SL S+*E RETSTRP+LNMTL
Subject   5778  RARRWRELSME*VEYESQESL*SK*EKRETSTRPSLNMTL  5897

Range 3: 5776 to 5898 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
69.4 bits(148) 0.0 27/41(66%) 0/41(0%) Minus/Minus
Query        1  QSSALERIEHGVSGVGQPRQLVEQMREQGDFDATQLEHDLD  123
                + S LER+EHGVSGV +P + V+Q+RE+GDFDAT+LEHD D
Subject   5776  EGSTLERVEHGVSGV*EPGEPVKQVREEGDFDATKLEHDFD  5898

Range 4: 5777 to 5893 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.7 bits(124) 0.0 26/39(67%) 0/39(0%) Plus/Plus
Query        2  SRSCSSWVASKSPCSLICSTSCLGCPTPLTPCSILSNAE  118
                S+SCSS VASKSP SL C T   G  TPLTPCS LS+ E
Subject   5777  SKSCSSLVASKSPSSLTCFTGSPGSHTPLTPCSTLSSVE  5893

Range 5: 5783 to 5893 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.5 bits(117) 0.0 25/37(68%) 0/37(0%) Minus/Minus
Query        8  LCVGEN*AWSKWSRTAKTACGADERTGRLRRDPT*T*  118
                L  GE+*AWSKWS  A+ AC A ER GRLRRD  *T*
Subject   5783  LDAGES*AWSKWSMRARRACEASERRGRLRRDQA*T*  5893

Grapevine rupestris vein feathering virus replicase associated polyprotein mRNA, partial cds

Sequence ID: AY128949.1 Length: 1791 Number of Matches: 3

Range 1: 828 to 950 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.1 bits(175) 0.0 34/41(83%) 0/41(0%) Plus/Plus
Query        1  IKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSLQRRAL  123
                +KVMFKLGRVEVSLF+HLL KL+WLSYS+Y+ LNSLQRRAL
Subject    828  VKVMFKLGRVEVSLFAHLLSKLTWLSYSSYAYLNSLQRRAL  950

Range 2: 831 to 950 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.1 bits(116) 0.0 23/40(57%) 0/40(0%) Minus/Minus
Query        4  QSSALERIEHGVSGVGQPRQLVEQMREQGDFDATQLEHDL  123
                + +ALER+  GV GVGQP QL E++ E+ +FDAT+ EHDL
Subject    831  EGAALERV*IGVGGVGQPGQLGEEVGEERNFDATKFEHDL  950

Range 3: 833 to 949 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.9 bits(96) 0.0 24/39(62%) 0/39(0%) Minus/Minus
Query        6  RALRWRELSME*VE*DSQDSLWSR*ENRETSTRPNLNMT  122
                RA RW E    * E*D+Q SL  R   RETSTRP+LNMT
Subject    833  RARRWSEFR*A*EE*DNQVSLERRWAKRETSTRPSLNMT  949

Nucleotide Sequence (319 letters)

Query ID:ds2015-149_49
Query definition:No definition line
Query length:122
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 18 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
32
64
96
128
160
192
224
256
288
319

Descriptions

Alignments

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: KY513701.1 Length: 6730 Number of Matches: 5

Range 1: 1425 to 1688 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
203.6 bits(438) 0.0 84/88(95%) 0/88(0%) Plus/Plus
Query        2  VLTDDSLFFSSPDAVEIPAASSIQQGLRHRLVPSAVYHSLFIYVRAVRTLRQTDPQRYVRTQSNKPEYSWVTSSAWDNLQHFVTETAH  265
                VLTDDSLFFSSPDAVEIPAASSIQQ LRHRLVPSAVYHSLFIYVRAVRTLRQTDPQ YVRTQSNKPEY+WVTS+AWDNLQHFVTETAH
Subject   1425  VLTDDSLFFSSPDAVEIPAASSIQQSLRHRLVPSAVYHSLFIYVRAVRTLRQTDPQGYVRTQSNKPEYAWVTSAAWDNLQHFVTETAH  1688

Range 2: 1424 to 1684 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
163.3 bits(350) 0.0 76/87(87%) 0/87(0%) Minus/Minus
Query        1  AVSVTKCCKLSQAEEVTQEYSGLLL*VRT*R*GSVCLKVLTART*MNREW*TAEGTRR*RRPCWMEEAAGISTASGEEKKRESSVST  261
                AVSVTKC +LSQA EVTQ YSGLLL*VRT   GSVC +VLTART*MNREW*TAEGTRR*RR CWMEEAAGISTASGEEKKRESSV T
Subject   1424  AVSVTKC*RLSQAAEVTQAYSGLLL*VRTYPWGSVCRRVLTART*MNREW*TAEGTRR*RRLCWMEEAAGISTASGEEKKRESSVRT  1684

Range 3: 1432 to 1704 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.7 bits(148) 0.0 42/91(46%) 0/91(0%) Minus/Minus
Query        9  WVCLGDARSL*QSAASCPRLRRLPRSTRACCFECEHSAEDQSALRF*QLGHR*TENGXXXXXXXXXXDPAGWRKRQGFPLRPGRRRKESRQ  281
                W    D R  *QSA  CPR ++ P+ TR CC EC  +  D+S    *    R*T +GRR RE D D D AGW++R G   R  +RR+ SRQ
Subject   1432  WCAADDERFR*QSAEGCPRQQK*PKRTRXCCSECGRTLGDRSVEES*LRARR*TGSGRRPREPDGDGDFAGWKRRPGSQRRLEKRRRGSRQ  1704

Range 4: 1428 to 1613 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.9 bits(144) 0.0 32/62(52%) 0/62(0%) Minus/Minus
Query        5  ALSANIALRISLP*GSDSSDIDEQRMVDGGGNETMTKTLLDGGSGRDFHCVRGGEEKRVVSQ  190
                ALSA++ L I L    D + +DEQ +VDG GN+T+T+TLLDG  GRD + V   EE+ VVS+
Subject   1428  ALSADVPLGIGLSKSPDCAHVDEQGVVDGRGNQTVTETLLDGRGGRDLNGVWRREEEGVVSE  1613

Range 5: 1424 to 1690 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.4 bits(108) 0.0 44/89(49%) 0/89(0%) Plus/Plus
Query        1  CAD*RLSFLLLPGRSGNPCRFLHPAGXXXXXXXXXXXPFSVHLCPSCQNLKAD*SSALCSHSKQQARVXXXXXXXXXXXXXXCHRDRAS  267
                C  *RL  LL   R  +P R  HPA S S S SL RLP  VHL    Q+   D S  +  HS+QQ RV LG+   LGQ +ALCHR+R+S
Subject   1424  CPH*RLPLLLFSRRR*DPGRLFHPAKSPSPSGSLGRLPLPVHLRARSQDSSTDRSPRVRPHSEQQXRVRLGHFCCLGQPSALCHRNRSS  1690

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: NC_034205.1 Length: 6730 Number of Matches: 5

Range 1: 1425 to 1688 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
203.6 bits(438) 0.0 84/88(95%) 0/88(0%) Plus/Plus
Query        2  VLTDDSLFFSSPDAVEIPAASSIQQGLRHRLVPSAVYHSLFIYVRAVRTLRQTDPQRYVRTQSNKPEYSWVTSSAWDNLQHFVTETAH  265
                VLTDDSLFFSSPDAVEIPAASSIQQ LRHRLVPSAVYHSLFIYVRAVRTLRQTDPQ YVRTQSNKPEY+WVTS+AWDNLQHFVTETAH
Subject   1425  VLTDDSLFFSSPDAVEIPAASSIQQSLRHRLVPSAVYHSLFIYVRAVRTLRQTDPQGYVRTQSNKPEYAWVTSAAWDNLQHFVTETAH  1688

Range 2: 1424 to 1684 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
163.3 bits(350) 0.0 76/87(87%) 0/87(0%) Minus/Minus
Query        1  AVSVTKCCKLSQAEEVTQEYSGLLL*VRT*R*GSVCLKVLTART*MNREW*TAEGTRR*RRPCWMEEAAGISTASGEEKKRESSVST  261
                AVSVTKC +LSQA EVTQ YSGLLL*VRT   GSVC +VLTART*MNREW*TAEGTRR*RR CWMEEAAGISTASGEEKKRESSV T
Subject   1424  AVSVTKC*RLSQAAEVTQAYSGLLL*VRTYPWGSVCRRVLTART*MNREW*TAEGTRR*RRLCWMEEAAGISTASGEEKKRESSVRT  1684

Range 3: 1432 to 1704 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.7 bits(148) 0.0 42/91(46%) 0/91(0%) Minus/Minus
Query        9  WVCLGDARSL*QSAASCPRLRRLPRSTRACCFECEHSAEDQSALRF*QLGHR*TENGXXXXXXXXXXDPAGWRKRQGFPLRPGRRRKESRQ  281
                W    D R  *QSA  CPR ++ P+ TR CC EC  +  D+S    *    R*T +GRR RE D D D AGW++R G   R  +RR+ SRQ
Subject   1432  WCAADDERFR*QSAEGCPRQQK*PKRTRXCCSECGRTLGDRSVEES*LRARR*TGSGRRPREPDGDGDFAGWKRRPGSQRRLEKRRRGSRQ  1704

Range 4: 1428 to 1613 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.9 bits(144) 0.0 32/62(52%) 0/62(0%) Minus/Minus
Query        5  ALSANIALRISLP*GSDSSDIDEQRMVDGGGNETMTKTLLDGGSGRDFHCVRGGEEKRVVSQ  190
                ALSA++ L I L    D + +DEQ +VDG GN+T+T+TLLDG  GRD + V   EE+ VVS+
Subject   1428  ALSADVPLGIGLSKSPDCAHVDEQGVVDGRGNQTVTETLLDGRGGRDLNGVWRREEEGVVSE  1613

Range 5: 1424 to 1690 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.4 bits(108) 0.0 44/89(49%) 0/89(0%) Plus/Plus
Query        1  CAD*RLSFLLLPGRSGNPCRFLHPAGXXXXXXXXXXXPFSVHLCPSCQNLKAD*SSALCSHSKQQARVXXXXXXXXXXXXXXCHRDRAS  267
                C  *RL  LL   R  +P R  HPA S S S SL RLP  VHL    Q+   D S  +  HS+QQ RV LG+   LGQ +ALCHR+R+S
Subject   1424  CPH*RLPLLLFSRRR*DPGRLFHPAKSPSPSGSLGRLPLPVHLRARSQDSSTDRSPRVRPHSEQQXRVRLGHFCCLGQPSALCHRNRSS  1690

Grapevine rupestris vein feathering virus isolate TRAJ3 BR polyprotein gene, partial cds

Sequence ID: KX828705.1 Length: 6549 Number of Matches: 6

Range 1: 1367 to 1630 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
203.6 bits(438) 0.0 84/88(95%) 0/88(0%) Plus/Plus
Query        2  VLTDDSLFFSSPDAVEIPAASSIQQGLRHRLVPSAVYHSLFIYVRAVRTLRQTDPQRYVRTQSNKPEYSWVTSSAWDNLQHFVTETAH  265
                VLTDDSLFFSSPDAVEIPAASSIQQ LRHRLVPSAVYHSLFIYVRAVRTLRQTDPQ YVRTQSNKPEY+WVTS+AWDNLQHFVTETAH
Subject   1367  VLTDDSLFFSSPDAVEIPAASSIQQSLRHRLVPSAVYHSLFIYVRAVRTLRQTDPQGYVRTQSNKPEYAWVTSAAWDNLQHFVTETAH  1630

Range 2: 1366 to 1626 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
156.9 bits(336) 0.0 73/87(84%) 0/87(0%) Minus/Minus
Query        1  AVSVTKCCKLSQAEEVTQEYSGLLL*VRT*R*GSVCLKVLTART*MNREW*TAEGTRR*RRPCWMEEAAGISTASGEEKKRESSVST  261
                AVSVTKC +LSQA EVTQ YSGLLL VRT* *GSVC +VLTART M REW*TA+GTRR RR CWMEEAAGISTASGEEKKRESSV T
Subject   1366  AVSVTKC*RLSQAAEVTQAYSGLLLWVRT*P*GSVCRRVLTARTYMKREW*TADGTRRWRRLCWMEEAAGISTASGEEKKRESSVRT  1626

Range 3: 1377 to 1646 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.2 bits(208) 0.0 48/90(53%) 0/90(0%) Minus/Minus
Query       12  WVCLGDARSL*QSAASCPRLRRLPRSTRACCFECEHSAEDQSALRF*QLGHR*TENGXXXXXXXXXXDPAGWRKRQGFPLRPGRRRKESR  281
                W    D RS *++A  CP+ RR P+ T ACC  C H+ EDQSA  F*Q G  *  NGR   E  D E   GWRKRQG  LRPGR+R+ SR
Subject   1377  WSSADDGRSR*RNAEGCPKQRR*PKHTLACCSGCGHNPEDQSAAEF*QRGRI*RGNGRPLMELGDGEGSVGWRKRQGSQLRPGRKRRGSR  1646

Range 4: 1367 to 1555 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.9 bits(179) 0.0 38/63(60%) 0/63(0%) Minus/Minus
Query        2  ALSANIALRISLP*GSDSSDIDEQRMVDGGGNETMTKTLLDGGSGRDFHCVRGGEEKRVVSQH  190
                AL A+I LRISLP  SDS+D+ E+ MVD   N  M K LLDGGSGRD +CVRGG+E+ VV ++
Subject   1367  ALGADITLRISLPQSSDSADVYEEGMVDR*WN*AMAKALLDGGSGRDLNCVRGGKEEGVVREN  1555

Range 5: 1378 to 1569 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.2 bits(173) 0.0 39/64(61%) 0/64(0%) Plus/Plus
Query       13  RLSFLLLPGRSGNPCRFLHPAGXXXXXXXXXXXPFSVHLCPSCQNLKAD*SSALCSHSKQQARV  204
                RL  L LPGRS +PCRFLHP   S S  S+  LPF +H+ P CQN  AD*SS LC H +QQARV
Subject   1378  RLPLLFLPGRS*DPCRFLHPTEPSPSPSSISGLPFPLHIRPRCQNSAAD*SSGLCPHPEQQARV  1569

Range 6: 1377 to 1556 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
65.7 bits(137) 0.0 35/60(58%) 0/60(0%) Plus/Plus
Query       12  TTLFSSPPRTQWKSLPLPPSSRVFVIVSFPPPSTILCSSMSELSEP*GRLILSAMFALKA  191
                TT  S PPRTQ +SLPLPPS+R F I  F   STI  S  S LSE  GRLIL  M A +A
Subject   1377  TTPSSFPPRTQLRSLPLPPSNRAFAIA*FHQRSTIPSSYTSALSELCGRLILRVMSAPRA  1556

Grapevine rupestris vein feathering virus polyprotein gene, complete cds

Sequence ID: AY706994.1 Length: 6617 Number of Matches: 7

Range 1: 1419 to 1682 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
203.6 bits(438) 0.0 84/88(95%) 0/88(0%) Plus/Plus
Query        2  VLTDDSLFFSSPDAVEIPAASSIQQGLRHRLVPSAVYHSLFIYVRAVRTLRQTDPQRYVRTQSNKPEYSWVTSSAWDNLQHFVTETAH  265
                VLTDDSLFFSSPDAVEIPAASSIQQ LRHRLVPSAVYHSLFIYVRAVRTLRQTDPQ YVRTQSNKPEY+WVTS+AWDNLQHFVTETAH
Subject   1419  VLTDDSLFFSSPDAVEIPAASSIQQSLRHRLVPSAVYHSLFIYVRAVRTLRQTDPQGYVRTQSNKPEYAWVTSAAWDNLQHFVTETAH  1682

Range 2: 1418 to 1681 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
159.6 bits(342) 0.0 72/88(82%) 0/88(0%) Minus/Minus
Query        1  CAVSVTKCCKLSQAEEVTQEYSGLLL*VRT*R*GSVCLKVLTART*MNREW*TAEGTRR*RRPCWMEEAAGISTASGEEKKRESSVST  264
                CAVSVTKCC+LSQA EVTQ YSGLLL*VRT*  GSVC +V TA T MNREW TAEGT R R+ CWMEEAAGISTASGEEKKRESSV T
Subject   1418  CAVSVTKCCRLSQAAEVTQAYSGLLL*VRT*PWGSVCRRVRTALTYMNREWYTAEGTNRWRKLCWMEEAAGISTASGEEKKRESSVKT  1681

Range 3: 1422 to 1607 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
77.1 bits(162) 0.0 36/62(58%) 0/62(0%) Minus/Minus
Query        5  ALSANIALRISLP*GSDSSDIDEQRMVDGGGNETMTKTLLDGGSGRDFHCVRGGEEKRVVSQ  190
                ALSAN+AL I LP  +DS D+ EQ +V GG ++ M + LLDGGS  DFH V  GEE+ VVSQ
Subject   1422  ALSANVALGIGLPESADSPDVYEQGVVHGGRHQPMAQALLDGGSCGDFHGVGRGEEEGVVSQ  1607

Range 4: 1570 to 1698 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.1 bits(114) 0.0 24/43(56%) 0/43(0%) Minus/Minus
Query      153  WVCLGDARSL*QSAASCPRLRRLPRSTRACCFECEHSAEDQSA  281
                W   GDARS  QSAA  P+ RR P+ T+ACC ECE S  D+ A
Subject   1570  WCVGGDARSPSQSAAGYPKRRR*PKHTQACCSECERSLGDRFA  1698

Range 5: 1423 to 1488 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
38.2 bits(77) 0.0 15/22(68%) 0/22(0%) Minus/Minus
Query        6  GWRKRQGFPLRPGRRRKESRQS  71
                GWRK +GFP R  RRR+ SRQS
Subject   1423  GWRKLRGFPRRRERRRRGSRQS  1488

Range 6: 1424 to 1615 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
54.2 bits(112) 0.0 31/64(48%) 0/64(0%) Plus/Plus
Query        7  D*RLSFLLLPGRSGNPCRFLHPAGXXXXXXXXXXXPFSVHLCPSCQNLKAD*SSALCSHSKQQA  198
                D*RL  LLL  R GNP  FLHP   + S  + RR+P  VH+   C +  A+ S  L SHS+QQA
Subject   1424  D*RLPLLLLSRRRGNPRSFLHPTKLAPSVGAFRRVPLPVHIRQGCPHSPANRSPRLRSHSEQQA  1615

Range 7: 1423 to 1608 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.8 bits(111) 0.0 31/62(50%) 0/62(0%) Plus/Plus
Query        6  *LTTLFSSPPRTQWKSLPLPPSSRVFVIVSFPPPSTILCSSMSELSEP*GRLILSAMFALKA  191
                *LTT  SSP  T WKS  LPPS++   I    PP T  CS  S LS   G+ I  A FAL+A
Subject   1423  *LTTPSSSPLPTPWKSPQLPPSNKACAIGWCLPPCTTPCSYTSGLSALSGKPIPKATFALRA  1608

Grapevine rupestris vein feathering virus isolate CHASS, complete genome

Sequence ID: KY513702.1 Length: 6716 Number of Matches: 5

Range 1: 1426 to 1689 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
203.6 bits(438) 0.0 84/88(95%) 0/88(0%) Plus/Plus
Query        2  VLTDDSLFFSSPDAVEIPAASSIQQGLRHRLVPSAVYHSLFIYVRAVRTLRQTDPQRYVRTQSNKPEYSWVTSSAWDNLQHFVTETAH  265
                VLTDDSLFFSSPDAVEIPAASSIQQ LRHRLVPSAVYHSLFIYVRAVRTLRQTDPQ YVRTQSNKPEY+WVTS+AWDNLQHFVTETAH
Subject   1426  VLTDDSLFFSSPDAVEIPAASSIQQSLRHRLVPSAVYHSLFIYVRAVRTLRQTDPQGYVRTQSNKPEYAWVTSAAWDNLQHFVTETAH  1689

Range 2: 1425 to 1685 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
160.5 bits(344) 0.0 75/87(86%) 0/87(0%) Minus/Minus
Query        1  AVSVTKCCKLSQAEEVTQEYSGLLL*VRT*R*GSVCLKVLTART*MNREW*TAEGTRR*RRPCWMEEAAGISTASGEEKKRESSVST  261
                AVSVTKC +LSQA EVTQ YSGLLL VRT* *GSVC +VLTART*M REW*TAEGTRR RR CWMEEAAGISTASGEEKKRESSV T
Subject   1425  AVSVTKC*RLSQAAEVTQAYSGLLLWVRT*P*GSVCRRVLTART*MKREW*TAEGTRRWRRLCWMEEAAGISTASGEEKKRESSVRT  1685

Range 3: 1426 to 1614 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.0 bits(164) 0.0 31/63(49%) 0/63(0%) Minus/Minus
Query        2  ALSANIALRISLP*GSDSSDIDEQRMVDGGGNETMTKTLLDGGSGRDFHCVRGGEEKRVVSQH  190
                AL A++ LR+ LP  SD  D+DE+ +VD  GN+ M K LLDG  GRD + +RGGEE+ +V ++
Subject   1426  ALGADVTLRVGLPQSSDRPDVDEEGVVDRRGNKAMAKALLDGRGGRDLNGIRGGEEEGIVREN  1614

Range 4: 1436 to 1684 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.4 bits(143) 0.0 37/83(45%) 0/83(0%) Minus/Minus
Query       12  RSL*QSAASCPRLRRLPRSTRACCFECEHSAEDQSALRF*QLGHR*TENGXXXXXXXXXXDPAGWRKRQGFPLRPGRRRKESR  260
                RS  ++A  CP+ +R P+ TRACC  C  + E + A  F*  G R*  +GR +RE+ D E  AGW++R G    PGRRR+ +R
Subject   1436  RSRSRNAEDCPKQQR*PKRTRACCSGCGRNPEGRFAAEF*PPGRR*RGSGRPQREQGDGEGFAGWKRRPGSQRHPGRRRRGNR  1684

Range 5: 1425 to 1628 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.0 bits(105) 0.0 32/68(47%) 0/68(0%) Plus/Plus
Query        1  CAD*RLSFLLLPGRSGNPCRFLHPAGXXXXXXXXXXXPFSVHLCPSCQNLKAD*SSALCSHSKQQARV  204
                C+  R   LLLPG   +P R  HPA  S S  SL  LP  +HL P  QN  A+  S L  H +QQARV
Subject   1425  CSHGRFPLLLLPGCR*DPGRLFHPAKPSPSPCSLCGLPLPLHLRPGGQNSAANRPSGLRPHPEQQARV  1628

Nucleotide Sequence (734 letters)

Query ID:ds2015-149_49
Query definition:No definition line
Query length:122
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 18 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
74
148
222
296
370
444
518
592
666
734

Descriptions

Alignments

Grapevine rupestris vein feathering virus isolate CHASS, complete genome

Sequence ID: KY513702.1 Length: 6716 Number of Matches: 14

Range 1: 5566 to 6297 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
543.6 bits(1180) 0.0 228/244(93%) 0/244(0%) Minus/Plus
Query        3  EGCIRSPVALFAKLMVCVDDGTIQEKLLSYATEFSIGHSLGDAFWNLLPIESVPYQSAVFDFFCRHAPEDVKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSIQRRALRGKAVRQHFPGDSKEVTELQGELLHTFSMSSAPRVLTGGLHLPSSAPMSNETQLPISGRPSRDDHRSDPQPSLPLAPQVKESQALSLSIPFQWVALIIKSDSAAFTVDLAASTTLKKLTDPFRSCEITHLEVV  734
                EGCIRSPVALFAKLMVCVDDGTI EKLLSYATEFSIGHSLGDAFWNLLPIESVPYQSAVFDFFCRHA ED+KVMFKLGRVEVSLFSHLLH+LSWLSYSTYSMLNS+QRRALRGKAVRQHFPGDSKEVTELQGELLHTFSMS+ PRVLTGGL LP+ APMSNE QLPISGRPSRDDHRSDPQP+LPLAP+V+ES ALSLSIPFQWVALIIKSDSAAFTVDLAASTTLKKLTDPFRSCEIT+LEVV
Subject   5566  EGCIRSPVALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPIESVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHRLSWLSYSTYSMLNSLQRRALRGKAVRQHFPGDSKEVTELQGELLHTFSMSTTPRVLTGGLILPAPAPMSNEAQLPISGRPSRDDHRSDPQPTLPLAPKVQESPALSLSIPFQWVALIIKSDSAAFTVDLAASTTLKKLTDPFRSCEITNLEVV  6297

Range 2: 5568 to 6071 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
311.3 bits(673) 0.0 140/168(83%) 0/168(0%) Plus/Minus
Query      229  PEMGSWVSFDMGADEGRCRPPVRTRGADDIENVWSNSPCSSVTSLESPGKC*RTAFPRRALRWMEFSMEYVEYESQESLWSRWEKRETSTRPSLNMTLTSSGAWRQKKSNTADW*GTDSIGRRFQKASPREWPMENSVA*ERSFSWMVPSSTQTMSLAKSATGERMQP  732
                PEMGSW SFDMGA  GR RPPVRTRG  DIENV SNSPCSSVTSLESPGKC RTA PRRA RW E SME VEYESQESL S+ EKRETSTRPSLNMTL SS AWRQKKS TAD *GTDS+G RFQKASPRE P+ENSVA E SFS MVPSSTQTMSLA SATGERMQP
Subject   5568  PEMGSWASFDMGAGAGRMRPPVRTRGVVDIENV*SNSPCSSVTSLESPGKCWRTALPRRARRWRELSME*VEYESQESL*SK*EKRETSTRPSLNMTLMSSEAWRQKKSKTAD**GTDSMGSRFQKASPRE*PIENSVAYESSFSSMVPSSTQTMSLANSATGERMQP  6071

Range 3: 6132 to 6296 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
111.0 bits(236) 0.0 50/55(91%) 0/55(0%) Plus/Minus
Query        4  TTSRWVISQLRNGSVSFFKVVEAARSTVKAAESLFIMRATHWKGMESESACDSLT  168
                TTSR VISQLRNGSVSFF+VVEAARSTVKAAESL IMRATHWKGMESESA DS T
Subject   6132  TTSRLVISQLRNGSVSFFRVVEAARSTVKAAESLLIMRATHWKGMESESAGDSWT  6296

Range 4: 5566 to 6294 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
347.0 bits(751) 0.0 160/243(66%) 0/243(0%) Plus/Minus
Query        6  DFEVGDFTAPERVREFLQSGGGSQIDSEGCGVTLYYESNPLEGDGE*ERLRFLDLGXXXXXXXXXXTMVIARRTTRDGQLGLI*HGCGRGKMQAASEDARG**H*KCVEQFTL*LGNLFGITREMLTNGFSTEGSALDGVQHGVCGVREPRELVEQMGEEGDFYAAEFEHDLDVLRSVAAEEVEHG*LVRDGLDREKIPEGVTQRVADGEFSGVGEKLLLDGTVVHTNHELGEERDRGTNAAL  734
                D E+GD TAPE +REFLQSGGGS++DSEG G+ L YESNPLEGDGE*ER RFLD GRERK RLRIR MVI RRTTRDGQLG I*HG    + + A +DAR  *H*+CV+QFTL*L +LFG+TR++L NGF+ EGS L+ V+HGV GV EP E V+Q+ EEGDF A + EHD DVL SVA EE++   L+RD  D E+IPEGVT+R+ D E SG+ E+LL+DG VVHT+HE GE+RD G NA L
Subject   5566  DLEIGDLTAPEWIREFLQSGGGSEVDSEGGGIALDYESNPLEGDGE*ERRRFLDFGRERKSRLRIRAMVITRRTTRDGQLGFI*HGGRSREDETAGKDARSG*H*ECVKQFTL*LSDLFGVTRKVLANGFAAEGSTLERVEHGVSGV*EPGEPVKQVREEGDFDATKLEHDFDVL*SVATEEIKDSGLIRDRFDGEQIPEGVTERMTD*ELSGIREQLLVDGAVVHTDHEFGEQRDGGANATL  6294

Range 5: 5568 to 5792 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
104.6 bits(222) 0.0 46/75(61%) 0/75(0%) Minus/Plus
Query      508  GLHSFPCRALRQAHGLCGRRYHPREASLLRH*ILHRPLSG*RLLESSPDRVRPLPISRVRLLLPPRSGGRQGHVQ  732
                GLHS P RA+RQ HGLCGRR+H REA+L+ H*+L+R  S *RLLES+P R+ PL I  +  LL PR  G Q HVQ
Subject   5568  GLHSLPRRAVRQTHGLCGRRHHRREAALVCH*VLNRSFSR*RLLESAPHRICPLSIRCL*FLLSPRFRGHQSHVQ  5792

Range 6: 6138 to 6296 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
104.2 bits(221) 0.0 40/53(75%) 0/53(0%) Minus/Plus
Query        4  GIAGALTLHPLPVGCSHNKE*LRSLHCRSGCLHHFEETHGPVPEL*NHPPRSR  162
                GIAGALTLHPLPVGCSHN+E  R LHCR  CLHH EETHG +PEL*+H  R R
Subject   6138  GIAGALTLHPLPVGCSHNQERFRRLHCRPRCLHHSEETHGSIPEL*DHQSRGR  6296

Range 7: 5855 to 6004 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.5 bits(152) 0.0 32/50(64%) 0/50(0%) Minus/Plus
Query      296  TPHTPC*TPSNAEPSVEKPFVSISLVIPKRLPSYKVNCSTHFQCHQPLAS  445
                TP TPC T S+ EPS  KPF S  LV PKR  SYKVNC TH QC   LAS
Subject   5855  TPLTPCSTLSSVEPSAAKPFASTFLVTPKRSLSYKVNCFTHSQCQPLLAS  6004

Range 8: 6038 to 6118 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.3 bits(123) 0.0 24/27(89%) 0/27(0%) Minus/Plus
Query      182  PCQMRPSCPSLVVLLAMTIVLILSLLF  262
                PCQM+PSCPSLVVLL MTI LILSLLF
Subject   6038  PCQMKPSCPSLVVLLVMTIALILSLLF  6118

Range 9: 5855 to 6184 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
183.9 bits(395) 0.0 78/110(71%) 0/110(0%) Plus/Minus
Query      116  EQPTGRGWRVRAPAIP*LGAREEEKAEDQNDGHREKDDQRWAAGSHLTWVRTREDAGRQ*GREGLMTLKMCGAIHLVAR*PLWNHQGNADERLFHGGLCVGWSSAWSMWS  445
                EQPTGRGWRVRAPAIP L AREEE AEDQ+DGH EKDDQRWAAG HLTW + +    R+*GRE  +TL+MC AIHLVA+*PLW+HQ +A ERL  GGL  G S AWS WS
Subject   5855  EQPTGRGWRVRAPAIPGLWAREEE*AEDQSDGHHEKDDQRWAAGLHLTWGQEQGG*DRR*GREEWLTLRMCEAIHLVAQ*PLWSHQESAGERLCRGGLDAGES*AWSKWS  6184

Range 10: 5567 to 5734 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
87.7 bits(185) 0.0 34/56(61%) 0/56(0%) Plus/Minus
Query      566  IGKGRTRSGEDSRRRHPESGRWRIQWRRREASLGWYRRPHKP*AWRRARQGNECSP  733
                I KG+ R G DSRRRH E+ R R QW  R AS  W RRPH+P* WR AR+G+EC+P
Subject   5567  IDKGQIRWGADSRRRHRENDRLRTQWHTRAASRRWCRRPHRP*VWRTARRGSECNP  5734

Range 11: 6227 to 6295 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.7 bits(76) 0.0 16/23(70%) 0/23(0%) Plus/Minus
Query        5  RLRGG*FHSSGTGP*VSSKWWRQ  73
                R R  * HSSG  P*VSS+WWRQ
Subject   6227  RPRDW*SHSSGMDP*VSSEWWRQ  6295

Range 12: 5883 to 6071 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.4 bits(167) 0.0 37/63(59%) 0/63(0%) Minus/Plus
Query      229  PTQSPPWKSRSSAFPW*FQRGYRATR*IAPHIFNVISPSRPHWRPASSLVRTHVK*DPAAHLW  417
                P  SPP +SRS A  W* QRG+ ATR*IA HI NV   SRP+ R        HVK* PAAHLW
Subject   5883  PASSPPRQSRSPALSW*LQRGH*ATR*IASHILNVNHSSRPYRRSHPPCSCPHVK*SPAAHLW  6071

Range 13: 5567 to 5734 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.8 bits(159) 0.0 35/56(62%) 0/56(0%) Minus/Plus
Query      566  RAAFVPLSRSSPSSWFVWTTVPSKRSFSPTPLNSPSATLWVTPSGIFSRSSPSLTN  733
                R AF P SR SP+SW VWTT PS RS S  PL+S S  L VTPSGI S S+ SL N
Subject   5567  RVAFAPPSRCSPNSWSVWTTAPSTRSCSRMPLSSQSVILSVTPSGICSPSNLSLIN  5734

Range 14: 6245 to 6295 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.9 bits(59) 0.0 12/17(71%) 0/17(0%) Minus/Plus
Query        5  RNSRTRSGAVKSPTSKS  55
                RNSR  SGAV+SP S+S
Subject   6245  RNSRIHSGAVRSPISRS  6295

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: KY513701.1 Length: 6730 Number of Matches: 13

Range 1: 5565 to 6296 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
541.8 bits(1176) 0.0 226/244(93%) 0/244(0%) Minus/Plus
Query        3  EGCIRSPVALFAKLMVCVDDGTIQEKLLSYATEFSIGHSLGDAFWNLLPIESVPYQSAVFDFFCRHAPEDVKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSIQRRALRGKAVRQHFPGDSKEVTELQGELLHTFSMSSAPRVLTGGLHLPSSAPMSNETQLPISGRPSRDDHRSDPQPSLPLAPQVKESQALSLSIPFQWVALIIKSDSAAFTVDLAASTTLKKLTDPFRSCEITHLEVV  734
                EGCIRSPVALFAKLMVCVDDGTI EKLLSYATEFSIGHSLGDAFWNLLPI+SVPYQSAVFDFFCRHA ED+KVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNS+QRRAL+GKAVRQHFPGDSKEVTELQGELLHTFSMS+ PRVLTGGL LP SAPMSNE QLP+SGRPSRDDHRSDPQP++PLAP+V+ES ALSLSIPFQWVALIIKSDSAAFTVDLAASTTLKKLTDPFRSCEIT+LEVV
Subject   5565  EGCIRSPVALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSLQRRALKGKAVRQHFPGDSKEVTELQGELLHTFSMSTTPRVLTGGLLLPVSAPMSNEAQLPVSGRPSRDDHRSDPQPTIPLAPKVQESPALSLSIPFQWVALIIKSDSAAFTVDLAASTTLKKLTDPFRSCEITNLEVV  6296

Range 2: 5567 to 6070 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
305.8 bits(661) 0.0 133/168(79%) 0/168(0%) Plus/Minus
Query      229  PEMGSWVSFDMGADEGRCRPPVRTRGADDIENVWSNSPCSSVTSLESPGKC*RTAFPRRALRWMEFSMEYVEYESQESLWSRWEKRETSTRPSLNMTLTSSGAWRQKKSNTADW*GTDSIGRRFQKASPREWPMENSVA*ERSFSWMVPSSTQTMSLAKSATGERMQP  732
                PE G+W SFDMGA+ GR RPPVRTRG  DIENV SNSPCSSVTSLESPGKC RTA P  A R  E SME VEYESQESL SRWEK ETSTRPSLN+TL SS AWRQKKS TADW GT+S+G RFQKASPREWPMENSVA*E SFS +VPSST T+SLAK ATG+RMQP
Subject   5567  PETGNWASFDMGAETGRRRPPVRTRGVVDIENV*SNSPCSSVTSLESPGKCWRTALPLSARRCRELSME*VEYESQESL*SRWEKSETSTRPSLNITLISSEAWRQKKSKTADWYGTESMGSRFQKASPREWPMENSVA*ESSFSSIVPSSTHTISLAKRATGDRMQP  6070

Range 3: 6131 to 6295 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
105.1 bits(223) 0.0 48/55(87%) 0/55(0%) Plus/Minus
Query        4  TTSRWVISQLRNGSVSFFKVVEAARSTVKAAESLFIMRATHWKGMESESACDSLT  168
                TTSR VISQLR GSVSF +VVEAARSTVKAAESL IMRATHWKGMESESA DS T
Subject   6131  TTSRLVISQLRXGSVSFLRVVEAARSTVKAAESLLIMRATHWKGMESESAGDSWT  6295

Range 4: 5565 to 6293 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
326.4 bits(706) 0.0 153/243(63%) 0/243(0%) Plus/Minus
Query        6  DFEVGDFTAPERVREFLQSGGGSQIDSEGCGVTLYYESNPLEGDGE*ERLRFLDLGXXXXXXXXXXTMVIARRTTRDGQLGLI*HGCGRGKMQAASEDARG**H*KCVEQFTL*LGNLFGITREMLTNGFSTEGSALDGVQHGVCGVREPRELVEQMGEEGDFYAAEFEHDLDVLRSVAAEEVEHG*LVRDGLDREKIPEGVTQRVADGEFSGVGEKLLLDGTVVHTNHELGEERDRGTNAAL  734
                D ++GD TAPE +REFL+SGGGSQ+DSEG G+ L YESNPLEGDGE*ER  FLD GRER  RLRIR MVIARRTTR+GQLG I*HG   G+ +AASE+AR  *H*KCV+QFTL*L +L GITREML N  + E + L GV+HGV GV EP ELV+Q+GE+ DF   + EH+LD+LR +A EEV+  *LV D +  E+IPE +T+RVADGE SG+ E+LL++  +V+  H+LG+E DR  +AAL
Subject   5565  DLQIGDLTAPEXIREFLESGGGSQVDSEGSGIALDYESNPLEGDGE*ERRGFLDFGRERNSRLRIRAMVIARRTTRNGQLGFI*HGSRDGEEKAASENARSG*H*KCVKQFTL*LSHLLGITREMLANSLAFERTTLQGVEHGVGGV*EPGELVKQVGEK*DFDTTQLEHNLDILRGMATEEVKDR*LVWD*VYGEQIPESITERVADGELSGIREQLLINSAIVNAYHQLGKESDRRPDAAL  6293

Range 5: 5854 to 6117 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
124.3 bits(265) 0.0 58/88(66%) 0/88(0%) Minus/Plus
Query      182  TPHTPC*TPSNAEPSVEKPFVSISLVIPKRLPSYKVNCSTHFQCHQPLASSLAACIFPRPHPCQMRPSCPSLVVLLAMTIVLILSLLF  445
                TP TPC TP +   S  + F SIS VIP+R  SYKVNC THFQC   LA SLAA   P   PCQM+PSCP LVVLLAMTI LILSLLF
Subject   5854  TPPTPCSTPCSVVRSKARLFASISRVIPRR*LSYKVNCFTHFQCQPLLAFSLAAFSSPSLLPCQMKPSCPFLVVLLAMTIALILSLLF  6117

Range 6: 6137 to 6295 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
99.1 bits(210) 0.0 38/53(72%) 0/53(0%) Minus/Plus
Query        4  GIAGALTLHPLPVGCSHNKE*LRSLHCRSGCLHHFEETHGPVPEL*NHPPRSR  162
                GI GALTLHPLPVGCSHN+E  R LHCR GCLHH +ETHG  PEL*+H    R
Subject   6137  GIPGALTLHPLPVGCSHNQERFRCLHCRPGCLHHSQETHGSXPEL*DHQSGGR  6295

Range 7: 5567 to 5791 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.3 bits(169) 0.0 40/75(53%) 0/75(0%) Minus/Plus
Query      508  GLHSFPCRALRQAHGLCGRRYHPREASLLRH*ILHRPLSG*RLLESSPDRVRPLPISRVRLLLPPRSGGRQGHVQ  732
                GLH    R+L QA G+  R ++  EA+LL H*+LHRPLS *  LES+P R+ P+P+S + LLL P  GG QG+VQ
Subject   5567  GLHPVAGRSLCQADGMR*RWHY**EAALLCH*VLHRPLSR*CFLESAPHRLSPIPVSGL*LLLSPCLGGYQGYVQ  5791

Range 8: 5908 to 6183 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
151.8 bits(325) 0.0 65/92(71%) 0/92(0%) Plus/Minus
Query      116  EQPTGRGWRVRAPAIP*LGAREEEKAEDQNDGHREKDDQRWAAGSHLTWVRTREDAGRQ*GREGLMTLKMCGAIHLVAR*PLWNHQGNADER  391
                EQPTGRGWRVRAP IP L AREE  AEDQ+DGHREKDDQ+ A G HLTW + R   GRQ* RE  +TLKMC AIHLVA+ P WNH GNA E+
Subject   5908  EQPTGRGWRVRAPGIPGLWAREE**AEDQSDGHREKDDQKRATGLHLTWEQRRGGEGRQ*EREEWLTLKMCEAIHLVAQSPPWNHPGNAGEQ  6183

Range 9: 5566 to 5736 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
65.2 bits(136) 0.0 28/57(49%) 0/57(0%) Plus/Minus
Query      563  LIGKGRTRSGEDSRRRHPESGRWRIQWRRREASLGWYRRPHKP*AWRRARQGNECSP  733
                L G G +  G DSR+ H ESGRWR QW +R AS     R   P AW+R R    CSP
Subject   5566  LTGMGLSLWGADSRKHHRESGRWRTQWHKRAASHQ*CHRQRIPSAWQRERPATGCSP  5736

Range 10: 6223 to 6273 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.9 bits(72) 0.0 13/17(76%) 0/17(0%) Plus/Minus
Query       26  HSSGTGP*VSSKWWRQP  76
                HSSG  P*VS +WWRQP
Subject   6223  HSSGXDP*VS*EWWRQP  6273

Range 11: 5912 to 6070 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.3 bits(147) 0.0 32/53(60%) 0/53(0%) Minus/Plus
Query      229  SSAFPW*FQRGYRATR*IAPHIFNVISPSRPHWRPASSLVRTHVK*DPAAHLW  387
                S AFP *FQ G  ATR*IA HIFNV   SR HWRP+   + +HVK* P A  W
Subject   5912  SPAFPG*FQGGD*ATR*IASHIFNVNHSSRSHWRPSPPRLCSHVK*SPVARFW  6070

Range 12: 5566 to 5736 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
44.6 bits(91) 0.0 28/57(49%) 0/57(0%) Minus/Plus
Query      563  RAAFVPLSRSSPSSWFVWTTVPSKRSFSPTPLNSPSATLWVTPSGIFSRSSPSLTNQ  733
                RAA    S S PS W+  T     RS S  PL+SPSATL V  SGI S  + S T+Q
Subject   5566  RAASGRRSLSLPS*WYALTMALLMRSCSLMPLSSPSATLSVMLSGICSP*TQSHTSQ  5736

Range 13: 6244 to 6294 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
26.3 bits(51) 0.0 11/17(65%) 0/17(0%) Minus/Plus
Query        5  RNSRTRSGAVKSPTSKS  55
                RNSR  SGAV+SP  +S
Subject   6244  RNSRIXSGAVRSPIWRS  6294

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: NC_034205.1 Length: 6730 Number of Matches: 13

Range 1: 5565 to 6296 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
541.8 bits(1176) 0.0 226/244(93%) 0/244(0%) Minus/Plus
Query        3  EGCIRSPVALFAKLMVCVDDGTIQEKLLSYATEFSIGHSLGDAFWNLLPIESVPYQSAVFDFFCRHAPEDVKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSIQRRALRGKAVRQHFPGDSKEVTELQGELLHTFSMSSAPRVLTGGLHLPSSAPMSNETQLPISGRPSRDDHRSDPQPSLPLAPQVKESQALSLSIPFQWVALIIKSDSAAFTVDLAASTTLKKLTDPFRSCEITHLEVV  734
                EGCIRSPVALFAKLMVCVDDGTI EKLLSYATEFSIGHSLGDAFWNLLPI+SVPYQSAVFDFFCRHA ED+KVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNS+QRRAL+GKAVRQHFPGDSKEVTELQGELLHTFSMS+ PRVLTGGL LP SAPMSNE QLP+SGRPSRDDHRSDPQP++PLAP+V+ES ALSLSIPFQWVALIIKSDSAAFTVDLAASTTLKKLTDPFRSCEIT+LEVV
Subject   5565  EGCIRSPVALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSLQRRALKGKAVRQHFPGDSKEVTELQGELLHTFSMSTTPRVLTGGLLLPVSAPMSNEAQLPVSGRPSRDDHRSDPQPTIPLAPKVQESPALSLSIPFQWVALIIKSDSAAFTVDLAASTTLKKLTDPFRSCEITNLEVV  6296

Range 2: 5567 to 6070 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
305.8 bits(661) 0.0 133/168(79%) 0/168(0%) Plus/Minus
Query      229  PEMGSWVSFDMGADEGRCRPPVRTRGADDIENVWSNSPCSSVTSLESPGKC*RTAFPRRALRWMEFSMEYVEYESQESLWSRWEKRETSTRPSLNMTLTSSGAWRQKKSNTADW*GTDSIGRRFQKASPREWPMENSVA*ERSFSWMVPSSTQTMSLAKSATGERMQP  732
                PE G+W SFDMGA+ GR RPPVRTRG  DIENV SNSPCSSVTSLESPGKC RTA P  A R  E SME VEYESQESL SRWEK ETSTRPSLN+TL SS AWRQKKS TADW GT+S+G RFQKASPREWPMENSVA*E SFS +VPSST T+SLAK ATG+RMQP
Subject   5567  PETGNWASFDMGAETGRRRPPVRTRGVVDIENV*SNSPCSSVTSLESPGKCWRTALPLSARRCRELSME*VEYESQESL*SRWEKSETSTRPSLNITLISSEAWRQKKSKTADWYGTESMGSRFQKASPREWPMENSVA*ESSFSSIVPSSTHTISLAKRATGDRMQP  6070

Range 3: 6131 to 6295 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
105.1 bits(223) 0.0 48/55(87%) 0/55(0%) Plus/Minus
Query        4  TTSRWVISQLRNGSVSFFKVVEAARSTVKAAESLFIMRATHWKGMESESACDSLT  168
                TTSR VISQLR GSVSF +VVEAARSTVKAAESL IMRATHWKGMESESA DS T
Subject   6131  TTSRLVISQLRXGSVSFLRVVEAARSTVKAAESLLIMRATHWKGMESESAGDSWT  6295

Range 4: 5565 to 6293 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
326.4 bits(706) 0.0 153/243(63%) 0/243(0%) Plus/Minus
Query        6  DFEVGDFTAPERVREFLQSGGGSQIDSEGCGVTLYYESNPLEGDGE*ERLRFLDLGXXXXXXXXXXTMVIARRTTRDGQLGLI*HGCGRGKMQAASEDARG**H*KCVEQFTL*LGNLFGITREMLTNGFSTEGSALDGVQHGVCGVREPRELVEQMGEEGDFYAAEFEHDLDVLRSVAAEEVEHG*LVRDGLDREKIPEGVTQRVADGEFSGVGEKLLLDGTVVHTNHELGEERDRGTNAAL  734
                D ++GD TAPE +REFL+SGGGSQ+DSEG G+ L YESNPLEGDGE*ER  FLD GRER  RLRIR MVIARRTTR+GQLG I*HG   G+ +AASE+AR  *H*KCV+QFTL*L +L GITREML N  + E + L GV+HGV GV EP ELV+Q+GE+ DF   + EH+LD+LR +A EEV+  *LV D +  E+IPE +T+RVADGE SG+ E+LL++  +V+  H+LG+E DR  +AAL
Subject   5565  DLQIGDLTAPEXIREFLESGGGSQVDSEGSGIALDYESNPLEGDGE*ERRGFLDFGRERNSRLRIRAMVIARRTTRNGQLGFI*HGSRDGEEKAASENARSG*H*KCVKQFTL*LSHLLGITREMLANSLAFERTTLQGVEHGVGGV*EPGELVKQVGEK*DFDTTQLEHNLDILRGMATEEVKDR*LVWD*VYGEQIPESITERVADGELSGIREQLLINSAIVNAYHQLGKESDRRPDAAL  6293

Range 5: 5854 to 6117 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
124.3 bits(265) 0.0 58/88(66%) 0/88(0%) Minus/Plus
Query      182  TPHTPC*TPSNAEPSVEKPFVSISLVIPKRLPSYKVNCSTHFQCHQPLASSLAACIFPRPHPCQMRPSCPSLVVLLAMTIVLILSLLF  445
                TP TPC TP +   S  + F SIS VIP+R  SYKVNC THFQC   LA SLAA   P   PCQM+PSCP LVVLLAMTI LILSLLF
Subject   5854  TPPTPCSTPCSVVRSKARLFASISRVIPRR*LSYKVNCFTHFQCQPLLAFSLAAFSSPSLLPCQMKPSCPFLVVLLAMTIALILSLLF  6117

Range 6: 6137 to 6295 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
99.1 bits(210) 0.0 38/53(72%) 0/53(0%) Minus/Plus
Query        4  GIAGALTLHPLPVGCSHNKE*LRSLHCRSGCLHHFEETHGPVPEL*NHPPRSR  162
                GI GALTLHPLPVGCSHN+E  R LHCR GCLHH +ETHG  PEL*+H    R
Subject   6137  GIPGALTLHPLPVGCSHNQERFRCLHCRPGCLHHSQETHGSXPEL*DHQSGGR  6295

Range 7: 5567 to 5791 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.3 bits(169) 0.0 40/75(53%) 0/75(0%) Minus/Plus
Query      508  GLHSFPCRALRQAHGLCGRRYHPREASLLRH*ILHRPLSG*RLLESSPDRVRPLPISRVRLLLPPRSGGRQGHVQ  732
                GLH    R+L QA G+  R ++  EA+LL H*+LHRPLS *  LES+P R+ P+P+S + LLL P  GG QG+VQ
Subject   5567  GLHPVAGRSLCQADGMR*RWHY**EAALLCH*VLHRPLSR*CFLESAPHRLSPIPVSGL*LLLSPCLGGYQGYVQ  5791

Range 8: 5908 to 6183 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
151.8 bits(325) 0.0 65/92(71%) 0/92(0%) Plus/Minus
Query      116  EQPTGRGWRVRAPAIP*LGAREEEKAEDQNDGHREKDDQRWAAGSHLTWVRTREDAGRQ*GREGLMTLKMCGAIHLVAR*PLWNHQGNADER  391
                EQPTGRGWRVRAP IP L AREE  AEDQ+DGHREKDDQ+ A G HLTW + R   GRQ* RE  +TLKMC AIHLVA+ P WNH GNA E+
Subject   5908  EQPTGRGWRVRAPGIPGLWAREE**AEDQSDGHREKDDQKRATGLHLTWEQRRGGEGRQ*EREEWLTLKMCEAIHLVAQSPPWNHPGNAGEQ  6183

Range 9: 5566 to 5736 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
65.2 bits(136) 0.0 28/57(49%) 0/57(0%) Plus/Minus
Query      563  LIGKGRTRSGEDSRRRHPESGRWRIQWRRREASLGWYRRPHKP*AWRRARQGNECSP  733
                L G G +  G DSR+ H ESGRWR QW +R AS     R   P AW+R R    CSP
Subject   5566  LTGMGLSLWGADSRKHHRESGRWRTQWHKRAASHQ*CHRQRIPSAWQRERPATGCSP  5736

Range 10: 6223 to 6273 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.9 bits(72) 0.0 13/17(76%) 0/17(0%) Plus/Minus
Query       26  HSSGTGP*VSSKWWRQP  76
                HSSG  P*VS +WWRQP
Subject   6223  HSSGXDP*VS*EWWRQP  6273

Range 11: 5912 to 6070 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.3 bits(147) 0.0 32/53(60%) 0/53(0%) Minus/Plus
Query      229  SSAFPW*FQRGYRATR*IAPHIFNVISPSRPHWRPASSLVRTHVK*DPAAHLW  387
                S AFP *FQ G  ATR*IA HIFNV   SR HWRP+   + +HVK* P A  W
Subject   5912  SPAFPG*FQGGD*ATR*IASHIFNVNHSSRSHWRPSPPRLCSHVK*SPVARFW  6070

Range 12: 5566 to 5736 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
44.6 bits(91) 0.0 28/57(49%) 0/57(0%) Minus/Plus
Query      563  RAAFVPLSRSSPSSWFVWTTVPSKRSFSPTPLNSPSATLWVTPSGIFSRSSPSLTNQ  733
                RAA    S S PS W+  T     RS S  PL+SPSATL V  SGI S  + S T+Q
Subject   5566  RAASGRRSLSLPS*WYALTMALLMRSCSLMPLSSPSATLSVMLSGICSP*TQSHTSQ  5736

Range 13: 6244 to 6294 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
26.3 bits(51) 0.0 11/17(65%) 0/17(0%) Minus/Plus
Query        5  RNSRTRSGAVKSPTSKS  55
                RNSR  SGAV+SP  +S
Subject   6244  RNSRIXSGAVRSPIWRS  6294

Grapevine rupestris vein feathering virus isolate TRAJ3 BR polyprotein gene, partial cds

Sequence ID: KX828705.1 Length: 6549 Number of Matches: 11

Range 1: 5507 to 6238 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
538.5 bits(1169) 0.0 225/244(92%) 0/244(0%) Minus/Plus
Query        3  EGCIRSPVALFAKLMVCVDDGTIQEKLLSYATEFSIGHSLGDAFWNLLPIESVPYQSAVFDFFCRHAPEDVKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSIQRRALRGKAVRQHFPGDSKEVTELQGELLHTFSMSSAPRVLTGGLHLPSSAPMSNETQLPISGRPSRDDHRSDPQPSLPLAPQVKESQALSLSIPFQWVALIIKSDSAAFTVDLAASTTLKKLTDPFRSCEITHLEVV  734
                EGCIRSPVALFAKLMVCVDDGTI EKLLSYATEFSIGHSLGD+FWNLLPIESVPYQSAVFDFFCRHA ED+KVMFKLGRVE+SLFSHLLHKLSWLSYSTYSMLNS+QRRALRGKAVRQHFPGDSKEVTELQGELLHTFSMSS PRVLTGGL LP+ APMSNE QLP SGRPSRDDHRSDPQP+LPLAP+V+ES ALSL+IPFQWVALIIKSDSAAFTVDLAAS TLKKLTDPFRSCEIT+LEVV
Subject   5507  EGCIRSPVALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDSFWNLLPIESVPYQSAVFDFFCRHASEDIKVMFKLGRVEISLFSHLLHKLSWLSYSTYSMLNSLQRRALRGKAVRQHFPGDSKEVTELQGELLHTFSMSSTPRVLTGGLLLPTPAPMSNEAQLPTSGRPSRDDHRSDPQPALPLAPKVQESPALSLAIPFQWVALIIKSDSAAFTVDLAASNTLKKLTDPFRSCEITNLEVV  6238

Range 2: 5509 to 6012 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
288.8 bits(624) 0.0 134/168(80%) 0/168(0%) Plus/Minus
Query      229  PEMGSWVSFDMGADEGRCRPPVRTRGADDIENVWSNSPCSSVTSLESPGKC*RTAFPRRALRWMEFSMEYVEYESQESLWSRWEKRETSTRPSLNMTLTSSGAWRQKKSNTADW*GTDSIGRRFQKASPREWPMENSVA*ERSFSWMVPSSTQTMSLAKSATGERMQP  732
                PE+GSW SFD+GA  GR RPPVRTRG DDIENV SNSPCSSVTSLESPGKC RTA PR A R  E SME VE +SQESL SR EKRE STRPSLN+TL SS A RQKKS TAD  GTDSIG +FQK SPRE P+ENSVA*ERSFS MVPSSTQTMSLAKSATGERMQP
Subject   5509  PEVGSWASFDIGAGVGRSRPPVRTRGVDDIENV*SNSPCSSVTSLESPGKCWRTALPRSARRCRELSME*VE*DSQESL*SR*EKREISTRPSLNITLISSEA*RQKKSKTAD*YGTDSIGSKFQKESPRE*PIENSVA*ERSFSSMVPSSTQTMSLAKSATGERMQP  6012

Range 3: 6073 to 6240 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
103.7 bits(220) 0.0 47/56(84%) 0/56(0%) Plus/Minus
Query        1  RTTSRWVISQLRNGSVSFFKVVEAARSTVKAAESLFIMRATHWKGMESESACDSLT  168
                RTTSR VISQLR GSVSF +V+EAARSTVKAAESL IMRATHWKGM SESA DS T
Subject   6073  RTTSRLVISQLRKGSVSFLRVLEAARSTVKAAESLLIMRATHWKGMASESAGDSWT  6240

Range 4: 5507 to 6238 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
327.3 bits(708) 0.0 155/244(64%) 0/244(0%) Plus/Minus
Query        3  DDFEVGDFTAPERVREFLQSGGGSQIDSEGCGVTLYYESNPLEGDGE*ERLRFLDLGXXXXXXXXXXTMVIARRTTRDGQLGLI*HGCGRGKMQAASEDARG**H*KCVEQFTL*LGNLFGITREMLTNGFSTEGSALDGVQHGVCGVREPRELVEQMGEEGDFYAAEFEHDLDVLRSVAAEEVEHG*LVRDGLDREKIPEGVTQRVADGEFSGVGEKLLLDGTVVHTNHELGEERDRGTNAAL  734
                DD +VGD TA + V E L+S G  +++SEG  + L YESNPLEGDGE*ER RFLDLGRER+ RLRIRTMVIARRTTR GQLG I*H    GK QAASEDARG *H*KCV+QFTL*L  LFG+T +ML + F++E + L  ++HGV GVR+P ELV+QM EE D  AAE EH  D+LRSV  +EV+   L+R GLD +++PEGVT+ V + EF GV E+LL++G +VHTNHELG++RD GTNAAL
Subject   5507  DDLKVGDLTASKGVCELLESVGSGEVNSEGSRIALNYESNPLEGDGE*ERRRFLDLGRERESRLRIRTMVIARRTTRSGQLGFI*HWGWSGKEQAASEDARGG*H*KCVKQFTL*LSYLFGVTGKMLADSFASERATLQRIEHGVSGVRQPGELVKQMREERDLDAAELEHHFDILRSVTTKEVKDCGLIRHGLDWKQVPEGVTKGVTNREFGGVREELLINGAIVHTNHELGKKRDWGTNAAL  6238

Range 5: 5796 to 6056 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
125.2 bits(267) 0.0 58/87(67%) 0/87(0%) Minus/Plus
Query      185  TPHTPC*TPSNAEPSVEKPFVSISLVIPKRLPSYKVNCSTHFQCHQPLASSLAACIFPRPHPCQMRPSCPSLVVLLAMTIVLILSLL  445
                TP TPC    +   S  K   +I  V PKR  SYKVNC THFQCH PLASSLAAC FP    CQM+PSCP LVVLLAMTIVLILSLL
Subject   5796  TPLTPCSILCSVARSEAKLSANIFPVTPKR*LSYKVNCFTHFQCHPPLASSLAACSFPLQPQCQMKPSCPLLVVLLAMTIVLILSLL  6056

Range 6: 5509 to 5733 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.4 bits(167) 0.0 42/75(56%) 0/75(0%) Minus/Plus
Query      508  GLHSFPCRALRQAHGLCGRRYHPREASLLRH*ILHRPLSG*RLLESSPDRVRPLPISRVRLLLPPRSGGRQGHVQ  732
                GLHSFP RA  QAHGLCGR +H  EA LLRH IL+  L  * LLE + +RVR + I  + LLL  R  G Q  VQ
Subject   5509  GLHSFPSRAFCQAHGLCGRWHH**EAPLLRHRILYWSLPW*LLLELASNRVRAVSIRSL*LLLSSRF*GYQSDVQ  5733

Range 7: 6079 to 6240 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.0 bits(153) 0.0 31/54(57%) 0/54(0%) Minus/Plus
Query        1  GIAGALTLHPLPVGCSHNKE*LRSLHCRSGCLHHFEETHGPVPEL*NHPPRSRP  162
                GIAGALT HPLPVGCSHN E    LHC      H +E H P+ +L*+H P  RP
Subject   6079  GIAGALTRHPLPVGCSHN*ERFCCLHC*PRRFQHSQEAHRPLSKL*DHQP*GRP  6240

Range 8: 5796 to 6125 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
172.4 bits(370) 0.0 75/110(68%) 0/110(0%) Plus/Minus
Query      116  EQPTGRGWRVRAPAIP*LGAREEEKAEDQNDGHREKDDQRWAAGSHLTWVRTREDAGRQ*GREGLMTLKMCGAIHLVAR*PLWNHQGNADERLFHGGLCVGWSSAWSMWS  445
                EQPTGRGWRVRAPAIP   ARE E+AEDQNDGHREKDDQ+WAAG HLT     E AGRQ*GREG MTLKMC AIHLVA+ PLW+H+ N   +L  G      + AWS WS
Subject   5796  EQPTGRGWRVRAPAIPGPWAREGEQAEDQNDGHREKDDQKWAAGLHLTLGLEWEGAGRQ*GREGWMTLKMCEAIHLVAQLPLWSHRENVGGQLCLGARDAAEN*AWSKWS  6125

Range 9: 5508 to 5675 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.9 bits(168) 0.0 33/56(59%) 0/56(0%) Plus/Minus
Query      566  IGKGRTRSGEDSRRRHPESGRWRIQWRRREASLGWYRRPHKP*AWRRARQGNECSP  733
                I   RTR    SRR H  S + RI+WR+R AS  W  RPHKP*AW++AR GNECSP
Subject   5508  IDTARTRLEASSRRSHQGSDQ*RIRWRKRGASHQWCHRPHKP*AWQKARLGNECSP  5675

Range 10: 5839 to 6012 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.3 bits(169) 0.0 37/58(64%) 0/58(0%) Minus/Plus
Query      229  PWKSRSSAFPW*FQRGYRATR*IAPHIFNVISPSRPHWRPASSLVRTHVK*DPAAHLW  402
                P +S    F  * QRG  ATR*IA HIFNVI PSRPHWRPA S    +VK* PAAH W
Subject   5839  PRQSCPPTFSR*LQRGN*ATR*IASHIFNVIHPSRPHWRPAPSHSSPNVK*SPAAHFW  6012

Range 11: 5508 to 5675 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.2 bits(149) 0.0 34/56(61%) 0/56(0%) Minus/Plus
Query      566  RAAFVPLSRSSPSSWFVWTTVPSKRSFSPTPLNSPSATLWVTPSGIFSRSSPSLTN  733
                RAAFVP SR  PSSWFVWT  P  RS S TP NS   T  VTPSG   +SSP   N
Subject   5508  RAAFVPQSRFLPSSWFVWTMAPLMRSSSLTPPNSLLVTPLVTPSGTCFQSSPCRIN  5675

Grapevine rupestris vein feathering virus replicase associated polyprotein mRNA, partial cds

Sequence ID: AY128949.1 Length: 1791 Number of Matches: 12

Range 1: 618 to 1349 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
515.6 bits(1119) 0.0 214/244(88%) 0/244(0%) Minus/Plus
Query        3  EGCIRSPVALFAKLMVCVDDGTIQEKLLSYATEFSIGHSLGDAFWNLLPIESVPYQSAVFDFFCRHAPEDVKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSIQRRALRGKAVRQHFPGDSKEVTELQGELLHTFSMSSAPRVLTGGLHLPSSAPMSNETQLPISGRPSRDDHRSDPQPSLPLAPQVKESQALSLSIPFQWVALIIKSDSAAFTVDLAASTTLKKLTDPFRSCEITHLEVV  734
                EGCIRSPVALFAKLMVCVDDGTI EK++SYATEFSIGHSLGDAFWNLLP+E+VPYQSAVFDFFCRHAPEDVKVMFKLGRVEVSLF+HLL KL+WLSYS+Y+ LNS+QRRALRGKAVRQHFPGDSKEVTELQGELLHTFSMSS P  LTGGL L ++ PMSNE QLP SGRPSRDDHR+DPQP+LP+AP+V+ES ALSL+IPFQWVALIIKSDSAAFTVDLAASTTLKKLTDPFRSCEIT LEVV
Subject    618  EGCIRSPVALFAKLMVCVDDGTIDEKMISYATEFSIGHSLGDAFWNLLPLEAVPYQSAVFDFFCRHAPEDVKVMFKLGRVEVSLFAHLLSKLTWLSYSSYAYLNSLQRRALRGKAVRQHFPGDSKEVTELQGELLHTFSMSSPPSKLTGGLLLSTTPPMSNEAQLPASGRPSRDDHRTDPQPALPVAPKVQESPALSLTIPFQWVALIIKSDSAAFTVDLAASTTLKKLTDPFRSCEITQLEVV  1349

Range 2: 620 to 1123 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
294.3 bits(636) 0.0 131/168(78%) 0/168(0%) Plus/Minus
Query      229  PEMGSWVSFDMGADEGRCRPPVRTRGADDIENVWSNSPCSSVTSLESPGKC*RTAFPRRALRWMEFSMEYVEYESQESLWSRWEKRETSTRPSLNMTLTSSGAWRQKKSNTADW*GTDSIGRRFQKASPREWPMENSVA*ERSFSWMVPSSTQTMSLAKSATGERMQP  732
                PE GSW SFDMG       PPV   G DDIENVWSNSPCSSVTSLESPGKC RTAFPRRA RW EF     E ++Q SL  RW KRETSTRPSLNMT TSSGAWRQKKS TADW*GT S GRRFQKASPRE PMENSVA*E  FS MVPSSTQTMSLAK ATGERMQP
Subject    620  PEAGSWASFDMGGVVESRSPPVSFEGGDDIENVWSNSPCSSVTSLESPGKCWRTAFPRRARRWSEFR*A*EE*DNQVSLERRWAKRETSTRPSLNMTFTSSGAWRQKKSKTADW*GTASRGRRFQKASPRECPMENSVA*EIIFSSMVPSSTQTMSLAKRATGERMQP  1123

Range 3: 1184 to 1351 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.0 bits(238) 0.0 50/56(89%) 0/56(0%) Plus/Minus
Query        1  RTTSRWVISQLRNGSVSFFKVVEAARSTVKAAESLFIMRATHWKGMESESACDSLT  168
                RTTS WVISQLR GSVSFFKVVEAARSTVKAAESL IMRATHWKGM SESA DS T
Subject   1184  RTTSSWVISQLRKGSVSFFKVVEAARSTVKAAESLLIMRATHWKGMVSESAGDSWT  1351

Range 4: 618 to 1340 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
298.0 bits(644) 0.0 143/241(59%) 0/241(0%) Plus/Minus
Query       12  EVGDFTAPERVREFLQSGGGSQIDSEGCGVTLYYESNPLEGDGE*ERLRFLDLGXXXXXXXXXXTMVIARRTTRDGQLGLI*HGCGRGKMQAASEDARG**H*KCVEQFTL*LGNLFGITREMLTNGFSTEGSALDGVQHGVCGVREPRELVEQMGEEGDFYAAEFEHDLDVLRSVAAEEVEHG*LVRDGLDREKIPEGVTQRVADGEFSGVGEKLLLDGTVVHTNHELGEERDRGTNAAL  734
                ++GDF A ER+R+ L SGGG ++D EG  V L YESNPLEGDGE*ER RFLD GR+RK RLRI  MVI RRTTR GQLG I*HG   G+ ++ASE    **H*KCVEQFTL*L  LFG+ R++L N  S EG+AL+ V  GV GV +P +L E++GEE +F A +FEHDL VLR +AAEEVE+ *LVR  L R+++PEG+ + V DGEF G+G    ++G VV+ NHELG++   G NA L
Subject    618  QLGDFAAAERIRQLL*SGGGGEVDGEGGRVALDYESNPLEGDGE*ERRRFLDFGRDRKSRLRISAMVITRRTTRSGQLGFI*HGGRGGEQKSASELRGW**H*KCVEQFTL*LSYLFGVPRKVLANCLSAEGAALERV*IGVGGVGQPGQLGEEVGEERNFDATKFEHDLHVLRGMAAEEVENR*LVRHSLKRKEVPEGIAKGVPDGEFGGIGNHFFINGAVVNANHELGKKSHGGANATL  1340

Range 5: 907 to 1170 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
124.3 bits(265) 0.0 57/88(65%) 0/88(0%) Minus/Plus
Query      182  TPHTPC*TPSNAEPSVEKPFVSISLVIPKRLPSYKVNCSTHFQCHQPLASSLAACIFPRPHPCQMRPSCPSLVVLLAMTIVLILSLLF  445
                TP TP *T S+A PS E+ F S  L  PKR  SYKVNCSTHFQCH    SSLA    P   PCQM+P+CP LVVLL MTI LILSLLF
Subject    907  TPPTPI*TRSSAAPSAERQFASTFLGTPKR*LSYKVNCSTHFQCHHHPRSSLADFCSPPRPPCQMKPNCPLLVVLLVMTIALILSLLF  1170

Range 6: 1193 to 1336 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
77.1 bits(162) 0.0 32/48(67%) 0/48(0%) Minus/Plus
Query       16  IAGALTLHPLPVGCSHNKE*LRSLHCRSGCLHHFEETHGPVPEL*NHP  159
                IAGALT HPLPVGCSHN+E L  LH R   LHHF+E  G  P+L NHP
Subject   1193  IAGALTHHPLPVGCSHNQERLCRLHRRPRRLHHFKEADGSFPQLRNHP  1336

Range 7: 620 to 847 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.6 bits(150) 0.0 39/76(51%) 0/76(0%) Minus/Plus
Query      505  GLHSFPCRALRQAHGLCGRRYHPREASLLRH*ILHRPLSG*RLLESSPDRVRPLPISRVRLLLPPRSGGRQGHVQT  732
                GLHS P  +  QAHGL  RR+H  +   L H ILHR L    LLE        LP+S  RLLLPP   GR+GHVQT
Subject    620  GLHSLPRGSFCQAHGLR*RRHH**KNDFLCHRILHRALPWRCLLEPPSS*GCALPVSGFRLLLPPCP*GREGHVQT  847

Range 8: 928 to 1236 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
138.1 bits(295) 0.0 64/103(62%) 0/103(0%) Plus/Minus
Query      116  EQPTGRGWRVRAPAIP*LGAREEEKAEDQNDGHREKDDQRWAAGSHLTWVRTREDAGRQ*GREGLMTLKMCGAIHLVAR*PLWNHQGNADERLFHGGLCVGWS  424
                EQPTGRGW VRAPAI  L AR+EE+AEDQ DGH EKDDQ+ A G HLTW        RQ*    +MTLKMCGAIHLVA+ PLW+ Q +A E  F GG   G S
Subject    928  EQPTGRGW*VRAPAILGLWARQEEQAEDQCDGHHEKDDQKRAVGLHLTWGAWWRAEVRQ*ASRVVMTLKMCGAIHLVAQLPLWSPQESAGELPFRGGRGAGAS  1236

Range 9: 619 to 789 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
65.2 bits(136) 0.0 25/57(44%) 0/57(0%) Plus/Minus
Query      563  LIGKGRTRSGEDSRRRHPESGRWRIQWRRREASLGWYRRPHKP*AWRRARQGNECSP  733
                L GK + +    SRR    S RWRI+W R+     W RR  KP*AW++  +G+EC+P
Subject    619  LTGKAQPQEEGGSRRHRQGSARWRIRWHRKSFFHQWCRRQRKP*AWQKEPRGSECNP  789

Range 10: 1279 to 1335 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.5 bits(58) 0.0 11/19(58%) 0/19(0%) Plus/Minus
Query       17  G*FHSSGTGP*VSSKWWRQ  73
                G*F S G  P  S KWWR+
Subject   1279  G*FRSCGKDPSASLKWWRR  1335

Range 11: 935 to 1123 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
74.8 bits(157) 0.0 33/63(52%) 0/63(0%) Minus/Plus
Query      229  PTQSPPWKSRSSAFPW*FQRGYRATR*IAPHIFNVISPSRPHWRPASSLVRTHVK*DPAAHLW  417
                P   PP K  S A  W  QRG  ATR*IAPHIFNVI+    HWR ++     HVK* P A  W
Subject    935  PAPRPPRKGSSPALSWGLQRGN*ATR*IAPHIFNVITTLEAHWRTSALHHAPHVK*SPTARFW  1123

Range 12: 619 to 789 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.8 bits(98) 0.0 25/57(44%) 0/57(0%) Minus/Plus
Query      563  RAAFVPLSRSSPSSWFVWTTVPSKRSFSPTPLNSPSATLWVTPSGIFSRSSPSLTNQ  733
                R AF P     PSSWF  TT P  +   P P NSPS T    PSG        LT+Q
Subject    619  RVAFAPPWLFLPSSWFALTTAPLMKK*FPMPPNSPSGTPLAMPSGTSFLLRLCLTSQ  789

Nucleotide Sequence (172 letters)

Query ID:ds2015-149_49
Query definition:No definition line
Query length:122
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 18 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
18
36
54
72
90
108
126
144
162
172

Descriptions

Alignments

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: KY513701.1 Length: 6730 Number of Matches: 6

Range 1: 5703 to 5873 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
138.5 bits(296) 0.0 57/57(100%) 0/57(0%) Minus/Plus
Query        1  LLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSML  171
                LLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSML
Subject   5703  LLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSML  5873

Range 2: 5702 to 5872 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
99.6 bits(211) 0.0 44/57(77%) 0/57(0%) Plus/Minus
Query        2  SME*VE*DSQDSLWSR*ENRETSTRPNLNMTLMSSDAWRQKKSKTADW*GTESIGSR  172
                SME*VE +SQ+SL SR E  ETSTRP+LN+TL+SS+AWRQKKSKTADW GTES+GSR
Subject   5702  SME*VEYESQESL*SRWEKSETSTRPSLNITLISSEAWRQKKSKTADWYGTESMGSR  5872

Range 3: 5703 to 5873 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.5 bits(141) 0.0 32/57(56%) 0/57(0%) Plus/Minus
Query        1  EHGVSGVGQPRQLVEQMREQGDFDATQLEHDLDVF*CMATEEVENGGLVRDRVDRKQ  171
                EHGV GV +P +LV+Q+ E+ DFD TQLEH+LD+   MATEEV++  LV D V  +Q
Subject   5703  EHGVGGV*EPGELVKQVGEK*DFDTTQLEHNLDILRGMATEEVKDR*LVWD*VYGEQ  5873

Range 4: 5716 to 5871 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
65.2 bits(136) 0.0 30/52(58%) 0/52(0%) Plus/Minus
Query        3  AWSKWSRTAKTACGADERTGRLRRDPT*T*P*CLLMHGDRRSRKRRTGKGQS  158
                AWS+WS  A+ AC A  R  RLR DP *T*P*    HGDRRS++  TG G S
Subject   5716  AWSRWSMRARRACEAGGRKVRLRHDPA*T*P*YPPRHGDRRSQRPLTGMGLS  5871

Range 5: 5702 to 5836 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.8 bits(109) 0.0 25/45(56%) 0/45(0%) Minus/Plus
Query       38  SASDRLCPLPVRRFRLLLSPCIRRHQGHVQVGSRRSLPVLSSAPQ  172
                SA  RL P+PV    LLLSPC+  +QG+VQ GS RSL  L  A Q
Subject   5702  SAPHRLSPIPVSGL*LLLSPCLGGYQGYVQAGSCRSLTFLPPASQ  5836

Range 6: 5755 to 5871 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.5 bits(106) 0.0 23/39(59%) 0/39(0%) Minus/Plus
Query        3  VAMHQKTSRSCSSWVASKSPCSLICSTSCLGCPTPLTPC  119
                VAM ++ SR CSSWV SKS  S  C TS  G  TP TPC
Subject   5755  VAMPRRISRLCSSWVVSKSHFSPTCFTSSPGSHTPPTPC  5871

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: NC_034205.1 Length: 6730 Number of Matches: 6

Range 1: 5703 to 5873 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
138.5 bits(296) 0.0 57/57(100%) 0/57(0%) Minus/Plus
Query        1  LLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSML  171
                LLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSML
Subject   5703  LLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSML  5873

Range 2: 5702 to 5872 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
99.6 bits(211) 0.0 44/57(77%) 0/57(0%) Plus/Minus
Query        2  SME*VE*DSQDSLWSR*ENRETSTRPNLNMTLMSSDAWRQKKSKTADW*GTESIGSR  172
                SME*VE +SQ+SL SR E  ETSTRP+LN+TL+SS+AWRQKKSKTADW GTES+GSR
Subject   5702  SME*VEYESQESL*SRWEKSETSTRPSLNITLISSEAWRQKKSKTADWYGTESMGSR  5872

Range 3: 5703 to 5873 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.5 bits(141) 0.0 32/57(56%) 0/57(0%) Plus/Minus
Query        1  EHGVSGVGQPRQLVEQMREQGDFDATQLEHDLDVF*CMATEEVENGGLVRDRVDRKQ  171
                EHGV GV +P +LV+Q+ E+ DFD TQLEH+LD+   MATEEV++  LV D V  +Q
Subject   5703  EHGVGGV*EPGELVKQVGEK*DFDTTQLEHNLDILRGMATEEVKDR*LVWD*VYGEQ  5873

Range 4: 5716 to 5871 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
65.2 bits(136) 0.0 30/52(58%) 0/52(0%) Plus/Minus
Query        3  AWSKWSRTAKTACGADERTGRLRRDPT*T*P*CLLMHGDRRSRKRRTGKGQS  158
                AWS+WS  A+ AC A  R  RLR DP *T*P*    HGDRRS++  TG G S
Subject   5716  AWSRWSMRARRACEAGGRKVRLRHDPA*T*P*YPPRHGDRRSQRPLTGMGLS  5871

Range 5: 5702 to 5836 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.8 bits(109) 0.0 25/45(56%) 0/45(0%) Minus/Plus
Query       38  SASDRLCPLPVRRFRLLLSPCIRRHQGHVQVGSRRSLPVLSSAPQ  172
                SA  RL P+PV    LLLSPC+  +QG+VQ GS RSL  L  A Q
Subject   5702  SAPHRLSPIPVSGL*LLLSPCLGGYQGYVQAGSCRSLTFLPPASQ  5836

Range 6: 5755 to 5871 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.5 bits(106) 0.0 23/39(59%) 0/39(0%) Minus/Plus
Query        3  VAMHQKTSRSCSSWVASKSPCSLICSTSCLGCPTPLTPC  119
                VAM ++ SR CSSWV SKS  S  C TS  G  TP TPC
Subject   5755  VAMPRRISRLCSSWVVSKSHFSPTCFTSSPGSHTPPTPC  5871

Grapevine rupestris vein feathering virus isolate TRAJ3 BR polyprotein gene, partial cds

Sequence ID: KX828705.1 Length: 6549 Number of Matches: 5

Range 1: 5645 to 5815 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
136.2 bits(291) 0.0 55/57(96%) 0/57(0%) Minus/Plus
Query        1  LLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSML  171
                LLPI+SVPYQSAVFDFFCRHASEDIKVMFKLGRVE+SLFSHLLHKLSWLSYSTYSML
Subject   5645  LLPIESVPYQSAVFDFFCRHASEDIKVMFKLGRVEISLFSHLLHKLSWLSYSTYSML  5815

Range 2: 5644 to 5814 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.9 bits(192) 0.0 44/57(77%) 0/57(0%) Plus/Minus
Query        2  SME*VE*DSQDSLWSR*ENRETSTRPNLNMTLMSSDAWRQKKSKTADW*GTESIGSR  172
                SME*VE*DSQ+SL SR*E RE STRP+LN+TL+SS+A RQKKSKTAD  GT+SIGS+
Subject   5644  SME*VE*DSQESL*SR*EKREISTRPSLNITLISSEA*RQKKSKTAD*YGTDSIGSK  5814

Range 3: 5645 to 5815 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.3 bits(158) 0.0 31/57(54%) 0/57(0%) Plus/Minus
Query        1  EHGVSGVGQPRQLVEQMREQGDFDATQLEHDLDVF*CMATEEVENGGLVRDRVDRKQ  171
                EHGVSGV QP +LV+QMRE+ D DA +LEH  D+   + T+EV++ GL+R  +D KQ
Subject   5645  EHGVSGVRQPGELVKQMREERDLDAAELEHHFDILRSVTTKEVKDCGLIRHGLDWKQ  5815

Range 4: 5646 to 5813 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.1 bits(114) 0.0 27/56(48%) 0/56(0%) Plus/Minus
Query        3  AWSKWSRTAKTACGADERTGRLRRDPT*T*P*CLLMHGDRRSRKRRTGKGQSRSEA  170
                AWSKWS+TA+ AC ADER  R RR   *T  *      D+RS++ R    ++R EA
Subject   5646  AWSKWSKTARRACEADERRERSRRGRA*TSL*YPQKRDDKRSQRLRIDTARTRLEA  5813

Range 5: 5712 to 5813 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 21/34(62%) 0/34(0%) Minus/Plus
Query        3  KTSRSCSSWVASKSPCSLICSTSCLGCPTPLTPC  104
                + S+ CSS  AS+S  SLIC TS  GC TPLTPC
Subject   5712  RISK*CSSSAASRSLSSLICFTSSPGCLTPLTPC  5813

Grapevine rupestris vein feathering virus isolate CHASS, complete genome

Sequence ID: KY513702.1 Length: 6716 Number of Matches: 6

Range 1: 5704 to 5874 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
135.3 bits(289) 0.0 55/57(96%) 0/57(0%) Minus/Plus
Query        1  LLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSML  171
                LLPI+SVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLH+LSWLSYSTYSML
Subject   5704  LLPIESVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHRLSWLSYSTYSML  5874

Range 2: 5703 to 5873 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.0 bits(214) 0.0 46/57(81%) 0/57(0%) Plus/Minus
Query        2  SME*VE*DSQDSLWSR*ENRETSTRPNLNMTLMSSDAWRQKKSKTADW*GTESIGSR  172
                SME*VE +SQ+SL S+*E RETSTRP+LNMTLMSS+AWRQKKSKTAD *GT+S+GSR
Subject   5703  SME*VEYESQESL*SK*EKRETSTRPSLNMTLMSSEAWRQKKSKTAD**GTDSMGSR  5873

Range 3: 5704 to 5874 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.9 bits(192) 0.0 36/57(63%) 0/57(0%) Plus/Minus
Query        1  EHGVSGVGQPRQLVEQMREQGDFDATQLEHDLDVF*CMATEEVENGGLVRDRVDRKQ  171
                EHGVSGV +P + V+Q+RE+GDFDAT+LEHD DV * +ATEE+++ GL+RDR D +Q
Subject   5704  EHGVSGV*EPGEPVKQVREEGDFDATKLEHDFDVL*SVATEEIKDSGLIRDRFDGEQ  5874

Range 4: 5714 to 5872 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.8 bits(159) 0.0 33/53(62%) 0/53(0%) Plus/Minus
Query        3  AWSKWSRTAKTACGADERTGRLRRDPT*T*P*CLLMHGDRRSRKRRTGKGQSR  161
                AWSKWS  A+ AC A ER GRLRRD  *T* *C L  GDRR++++R  KGQ R
Subject   5714  AWSKWSMRARRACEASERRGRLRRDQA*T*L*CPLKRGDRRNQRQRIDKGQIR  5872

Range 5: 5703 to 5837 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.7 bits(124) 0.0 27/45(60%) 0/45(0%) Minus/Plus
Query       38  SASDRLCPLPVRRFRLLLSPCIRRHQGHVQVGSRRSLPVLSSAPQ  172
                SA  R+CPL +R    LLSP  R HQ HVQ  SRRSLP+LS A Q
Subject   5703  SAPHRICPLSIRCL*FLLSPRFRGHQSHVQAWSRRSLPLLSLASQ  5837

Range 6: 5756 to 5872 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.3 bits(123) 0.0 26/39(67%) 0/39(0%) Minus/Plus
Query        3  VAMHQKTSRSCSSWVASKSPCSLICSTSCLGCPTPLTPC  119
                VA  Q+TS+SCSS VASKSP SL C T   G  TPLTPC
Subject   5756  VATLQRTSKSCSSLVASKSPSSLTCFTGSPGSHTPLTPC  5872

Grapevine rupestris vein feathering virus polyprotein gene, complete cds

Sequence ID: AY706994.1 Length: 6617 Number of Matches: 5

Range 1: 5547 to 5717 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
121.1 bits(258) 0.0 48/57(84%) 0/57(0%) Minus/Plus
Query        1  LLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSML  171
                LLPID+VP+QSAVFDFFCRHA ED+KVMFKLGRVEVSLFSHLL KL+WLSYS+Y+ L
Subject   5547  LLPIDAVPFQSAVFDFFCRHAPEDVKVMFKLGRVEVSLFSHLLSKLTWLSYSSYAYL  5717

Range 2: 5546 to 5701 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
87.2 bits(184) 0.0 39/52(75%) 0/52(0%) Plus/Minus
Query       17  E*DSQDSLWSR*ENRETSTRPNLNMTLMSSDAWRQKKSKTADW*GTESIGSR  172
                E +SQ SL SR E R+TSTRPNLNMTL SS AWRQKKSKTADW GT S+G R
Subject   5546  EYESQVSLESRWEKRDTSTRPNLNMTLTSSGAWRQKKSKTADWNGTASMGRR  5701

Range 3: 5547 to 5711 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.0 bits(142) 0.0 28/55(51%) 0/55(0%) Plus/Minus
Query        7  GVSGVGQPRQLVEQMREQGDFDATQLEHDLDVF*CMATEEVENGGLVRDRVDRKQ  171
                G+ GV +P +L EQM E+  F+ATQLEHD D+   +A EEVE+GGL  D +D ++
Subject   5547  GIGGVREPSELGEQMGEERHFNATQLEHDFDILRRVAAEEVEDGGLEWDSIDGEE  5711

Range 4: 5546 to 5680 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.8 bits(109) 0.0 26/45(58%) 0/45(0%) Minus/Plus
Query       38  SASDRLCPLPVRRFRLLLSPCIRRHQGHVQVGSRRSLPVLSSAPQ  172
                S   R CP+PVRR RLLL P     Q HVQVGSR S+ +L SA Q
Subject   5546  SPPHRCCPIPVRRLRLLLPPRA*GCQSHVQVGSR*SVSLLPSALQ  5680

Range 5: 5557 to 5700 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.2 bits(101) 0.0 28/48(58%) 0/48(0%) Plus/Minus
Query       18  SRTAKTACGADERTGRLRRDPT*T*P*CLLMHGDRRSRKRRTGKGQSR  161
                S  AK A  AD R   L+RDPT*T* *     G RRSR+RRTG GQ R
Subject   5557  STRAK*AWRADGRRETLQRDPT*T*L*HPQARGGRRSRRRRTGMGQHR  5700

Nucleotide Sequence (176 letters)

Query ID:ds2015-149_49
Query definition:No definition line
Query length:122
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 18 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
18
36
54
72
90
108
126
144
162
176

Descriptions

Alignments

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: KY513701.1 Length: 6730 Number of Matches: 5

Range 1: 5649 to 5822 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
142.2 bits(304) 0.0 58/58(100%) 0/58(0%) Minus/Plus
Query        2  SYATEFSIGHSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFS  175
                SYATEFSIGHSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFS
Subject   5649  SYATEFSIGHSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFS  5822

Range 2: 5648 to 5821 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
116.1 bits(247) 0.0 49/58(84%) 0/58(0%) Plus/Minus
Query        3  ENRETSTRPNLNMTLMSSDAWRQKKSKTADW*GTESIGSRFQKASPRE*PMENSVA*E  176
                E  ETSTRP+LN+TL+SS+AWRQKKSKTADW GTES+GSRFQKASPRE PMENSVA*E
Subject   5648  EKSETSTRPSLNITLISSEAWRQKKSKTADWYGTESMGSRFQKASPREWPMENSVA*E  5821

Range 3: 5649 to 5822 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.5 bits(154) 0.0 33/58(57%) 0/58(0%) Plus/Minus
Query        2  GKQGDFDTTQLEHDLDVF*CMATEEIENGGLVRDRVDRKQIPEGVAKGVTDGEFSGIR  175
                G++ DFDTTQLEH+LD+   MATEE+++  LV D V  +QIPE + + V DGE SGIR
Subject   5649  GEK*DFDTTQLEHNLDILRGMATEEVKDR*LVWD*VYGEQIPESITERVADGELSGIR  5822

Range 4: 5651 to 5812 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.5 bits(152) 0.0 32/54(59%) 0/54(0%) Minus/Plus
Query       12  LCH*ILHRSLPWRRLLESASDRLCPLPVRRFRFLLSPCIRRHQGHVQVGSCRSL  173
                LCH*+LHR L     LESA  RL P+PV     LLSPC+  +QG+VQ GSCRSL
Subject   5651  LCH*VLHRPLSR*CFLESAPHRLSPIPVSGL*LLLSPCLGGYQGYVQAGSCRSL  5812

Range 5: 5716 to 5823 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.5 bits(93) 0.0 21/36(58%) 0/36(0%) Plus/Minus
Query        1  GKTGRLRHDPT*T*P*CLLMHGDRRNRKRRTGKGQS  108
                G+  RLRHDP *T*P*    HGDRR+++  TG G S
Subject   5716  GRKVRLRHDPA*T*P*YPPRHGDRRSQRPLTGMGLS  5823

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: NC_034205.1 Length: 6730 Number of Matches: 5

Range 1: 5649 to 5822 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
142.2 bits(304) 0.0 58/58(100%) 0/58(0%) Minus/Plus
Query        2  SYATEFSIGHSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFS  175
                SYATEFSIGHSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFS
Subject   5649  SYATEFSIGHSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFS  5822

Range 2: 5648 to 5821 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
116.1 bits(247) 0.0 49/58(84%) 0/58(0%) Plus/Minus
Query        3  ENRETSTRPNLNMTLMSSDAWRQKKSKTADW*GTESIGSRFQKASPRE*PMENSVA*E  176
                E  ETSTRP+LN+TL+SS+AWRQKKSKTADW GTES+GSRFQKASPRE PMENSVA*E
Subject   5648  EKSETSTRPSLNITLISSEAWRQKKSKTADWYGTESMGSRFQKASPREWPMENSVA*E  5821

Range 3: 5649 to 5822 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.5 bits(154) 0.0 33/58(57%) 0/58(0%) Plus/Minus
Query        2  GKQGDFDTTQLEHDLDVF*CMATEEIENGGLVRDRVDRKQIPEGVAKGVTDGEFSGIR  175
                G++ DFDTTQLEH+LD+   MATEE+++  LV D V  +QIPE + + V DGE SGIR
Subject   5649  GEK*DFDTTQLEHNLDILRGMATEEVKDR*LVWD*VYGEQIPESITERVADGELSGIR  5822

Range 4: 5651 to 5812 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.5 bits(152) 0.0 32/54(59%) 0/54(0%) Minus/Plus
Query       12  LCH*ILHRSLPWRRLLESASDRLCPLPVRRFRFLLSPCIRRHQGHVQVGSCRSL  173
                LCH*+LHR L     LESA  RL P+PV     LLSPC+  +QG+VQ GSCRSL
Subject   5651  LCH*VLHRPLSR*CFLESAPHRLSPIPVSGL*LLLSPCLGGYQGYVQAGSCRSL  5812

Range 5: 5716 to 5823 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.5 bits(93) 0.0 21/36(58%) 0/36(0%) Plus/Minus
Query        1  GKTGRLRHDPT*T*P*CLLMHGDRRNRKRRTGKGQS  108
                G+  RLRHDP *T*P*    HGDRR+++  TG G S
Subject   5716  GRKVRLRHDPA*T*P*YPPRHGDRRSQRPLTGMGLS  5823

Grapevine rupestris vein feathering virus isolate CHASS, complete genome

Sequence ID: KY513702.1 Length: 6716 Number of Matches: 6

Range 1: 5650 to 5823 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
140.4 bits(300) 0.0 57/58(98%) 0/58(0%) Minus/Plus
Query        2  SYATEFSIGHSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFS  175
                SYATEFSIGHSLGDAFWNLLPI+SVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFS
Subject   5650  SYATEFSIGHSLGDAFWNLLPIESVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFS  5823

Range 2: 5649 to 5822 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
114.7 bits(244) 0.0 50/58(86%) 0/58(0%) Plus/Minus
Query        3  ENRETSTRPNLNMTLMSSDAWRQKKSKTADW*GTESIGSRFQKASPRE*PMENSVA*E  176
                E RETSTRP+LNMTLMSS+AWRQKKSKTAD *GT+S+GSRFQKASPRE*P+ENSVA E
Subject   5649  EKRETSTRPSLNMTLMSSEAWRQKKSKTAD**GTDSMGSRFQKASPRE*PIENSVAYE  5822

Range 3: 5650 to 5820 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
88.6 bits(187) 0.0 36/57(63%) 0/57(0%) Plus/Minus
Query        5  KQGDFDTTQLEHDLDVF*CMATEEIENGGLVRDRVDRKQIPEGVAKGVTDGEFSGIR  175
                ++GDFD T+LEHD DV * +ATEEI++ GL+RDR D +QIPEGV + +TD E SGIR
Subject   5650  EEGDFDATKLEHDFDVL*SVATEEIKDSGLIRDRFDGEQIPEGVTERMTD*ELSGIR  5820

Range 4: 5652 to 5819 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.5 bits(154) 0.0 33/56(59%) 0/56(0%) Minus/Plus
Query        6  LCH*ILHRSLPWRRLLESASDRLCPLPVRRFRFLLSPCIRRHQGHVQVGSCRSLPV  173
                +CH*+L+RS    RLLESA  R+CPL +R   FLLSP  R HQ HVQ  S RSLP+
Subject   5652  VCH*VLNRSFSR*RLLESAPHRICPLSIRCL*FLLSPRFRGHQSHVQAWSRRSLPL  5819

Range 5: 5654 to 5821 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.1 bits(103) 0.0 33/56(59%) 0/56(0%) Plus/Minus
Query        4  KTGRLRHDPT*T*P*CLLMHGDRRNRKRRTGKGQSRSEAXXXXXXXXXXXXXIQWH  171
                + GRLR D  *T* *C L  GDRRN+++R  KGQ R  ADSRRR + +DR R QWH
Subject   5654  RRGRLRRDQA*T*L*CPLKRGDRRNQRQRIDKGQIRWGADSRRRHRENDRLRTQWH  5821

Range 6: 5654 to 5776 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.3 bits(97) 0.0 24/41(59%) 0/41(0%) Minus/Plus
Query       49  MPLNSPSVTPLATPSGICFRSTLSLTSPPFSISSVAMHQKT  171
                MPL+S SV    TPSGIC  S LSL +P   ISSVA  Q+T
Subject   5654  MPLSSQSVILSVTPSGICSPSNLSLINPLSLISSVATLQRT  5776

Grapevine rupestris vein feathering virus isolate TRAJ3 BR polyprotein gene, partial cds

Sequence ID: KX828705.1 Length: 6549 Number of Matches: 3

Range 1: 5591 to 5764 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
138.5 bits(296) 0.0 55/58(95%) 0/58(0%) Minus/Plus
Query        2  SYATEFSIGHSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFS  175
                SYATEFSIGHSLGD+FWNLLPI+SVPYQSAVFDFFCRHASEDIKVMFKLGRVE+SLFS
Subject   5591  SYATEFSIGHSLGDSFWNLLPIESVPYQSAVFDFFCRHASEDIKVMFKLGRVEISLFS  5764

Range 2: 5590 to 5763 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
99.1 bits(210) 0.0 45/58(78%) 0/58(0%) Plus/Minus
Query        3  ENRETSTRPNLNMTLMSSDAWRQKKSKTADW*GTESIGSRFQKASPRE*PMENSVA*E  176
                E RE STRP+LN+TL+SS+A RQKKSKTAD  GT+SIGS+FQK SPRE*P+ENSVA*E
Subject   5590  EKREISTRPSLNITLISSEA*RQKKSKTAD*YGTDSIGSKFQKESPRE*PIENSVA*E  5763

Range 3: 5591 to 5761 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.3 bits(147) 0.0 26/57(46%) 0/57(0%) Plus/Minus
Query        5  KQGDFDTTQLEHDLDVF*CMATEEIENGGLVRDRVDRKQIPEGVAKGVTDGEFSGIR  175
                ++ D D  +LEH  D+   + T+E+++ GL+R  +D KQ+PEGV KGVT+ EF G+R
Subject   5591  EERDLDAAELEHHFDILRSVTTKEVKDCGLIRHGLDWKQVPEGVTKGVTNREFGGVR  5761

Grapevine rupestris vein feathering virus polyprotein gene, complete cds

Sequence ID: AY706994.1 Length: 6617 Number of Matches: 5

Range 1: 5493 to 5666 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
136.2 bits(291) 0.0 54/58(93%) 0/58(0%) Minus/Plus
Query        2  SYATEFSIGHSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFS  175
                SYATEFSIGHSLGDAFWNLLPID+VP+QSAVFDFFCRHA ED+KVMFKLGRVEVSLFS
Subject   5493  SYATEFSIGHSLGDAFWNLLPIDAVPFQSAVFDFFCRHAPEDVKVMFKLGRVEVSLFS  5666

Range 2: 5492 to 5665 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
114.2 bits(243) 0.0 49/58(84%) 0/58(0%) Plus/Minus
Query        3  ENRETSTRPNLNMTLMSSDAWRQKKSKTADW*GTESIGSRFQKASPRE*PMENSVA*E  176
                E R+TSTRPNLNMTL SS AWRQKKSKTADW GT S+G RFQKASPRE PMENSVA*E
Subject   5492  EKRDTSTRPNLNMTLTSSGAWRQKKSKTADWNGTASMGRRFQKASPREWPMENSVA*E  5665

Range 3: 5493 to 5666 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.9 bits(168) 0.0 31/58(53%) 0/58(0%) Plus/Minus
Query        2  GKQGDFDTTQLEHDLDVF*CMATEEIENGGLVRDRVDRKQIPEGVAKGVTDGEFSGIR  175
                G++  F+ TQLEHD D+   +A EE+E+GGL  D +D ++IP+GVA+GV +GEF GIR
Subject   5493  GEERHFNATQLEHDFDILRRVAAEEVEDGGLEWDSIDGEEIPKGVAEGVANGEFGGIR  5666

Range 4: 5492 to 5644 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.5 bits(152) 0.0 33/51(65%) 0/51(0%) Minus/Plus
Query       24  FLCH*ILHRSLPWRRLLESASDRLCPLPVRRFRFLLSPCIRRHQGHVQVGS  176
                FLCH ILH  LP RRLLES   R CP+PVRR R LL P     Q HVQVGS
Subject   5492  FLCHRILHWPLPRRRLLESPPHRCCPIPVRRLRLLLPPRA*GCQSHVQVGS  5644

Range 5: 5494 to 5604 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.3 bits(97) 0.0 23/37(62%) 0/37(0%) Minus/Plus
Query       64  LMPLNSPSVTPLATPSGICFRSTLSLTSPPFSISSVA  174
                LMP NSP  TP ATP GI   S LS +SPP S SS A
Subject   5494  LMPPNSPLATPSATPFGISSPSMLSHSSPPSSTSSAA  5604

Nucleotide Sequence (194 letters)

Query ID:ds2015-149_49
Query definition:No definition line
Query length:122
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 18 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
20
40
60
80
100
120
140
160
180
194

Descriptions

Alignments

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: KY513701.1 Length: 6730 Number of Matches: 6

Range 1: 5586 to 5771 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
152.7 bits(327) 0.0 62/62(100%) 0/62(0%) Minus/Plus
Query        3  VALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSVPYQSAVFDFFCRHASE  188
                VALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSVPYQSAVFDFFCRHASE
Subject   5586  VALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSVPYQSAVFDFFCRHASE  5771

Range 2: 5585 to 5773 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
124.8 bits(266) 0.0 55/63(87%) 0/63(0%) Plus/Minus
Query        1  SSDAWRQKKSKTADW*GTESIGSRFQKASPRE*PMENSVA*ERSFSSMVPSSTQTISLAKSAT  189
                SS+AWRQKKSKTADW GTES+GSRFQKASPRE PMENSVA*E SFSS+VPSST TISLAK AT
Subject   5585  SSEAWRQKKSKTADWYGTESMGSRFQKASPREWPMENSVA*ESSFSSIVPSSTHTISLAKRAT  5773

Range 3: 5581 to 5763 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
94.1 bits(199) 0.0 36/61(59%) 0/61(0%) Plus/Minus
Query       11  HGDRRSRKRRTGKGQSRSEADSRRHRQGSDRWRIQWHKKEASHQWCHHQRKPLAWRRVQPS  193
                HGDRRS++  TG G S   ADSR+H + S RWR QWHK+ ASHQ CH QR P AW+R +P+
Subject   5581  HGDRRSQRPLTGMGLSLWGADSRKHHRESGRWRTQWHKRAASHQ*CHRQRIPSAWQRERPA  5763

Range 4: 5585 to 5767 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.6 bits(174) 0.0 37/61(61%) 0/61(0%) Minus/Plus
Query        7  GCTLRQANGLR**WHH**EASFLCH*ILHRSLPWRCLLESASDRLCPLPVRRFRLLLSPCI  189
                G +L QA+G+R* WH+**EA+ LCH*+LHR L   C LESA  RL P+PV    LLLSPC+
Subject   5585  GRSLCQADGMR*RWHY**EAALLCH*VLHRPLSR*CFLESAPHRLSPIPVSGL*LLLSPCL  5767

Range 5: 5583 to 5762 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.8 bits(159) 0.0 36/60(60%) 0/60(0%) Plus/Minus
Query       12  MATEEVENGGLVRDRVDRKQIPEGIAKGVTDGEFSGIRKKLLINGAIINANH*LGEECNR  191
                MATEEV++  LV D V  +QIPE I + V DGE SGIR++LLIN AI+NA H LG+E +R
Subject   5583  MATEEVKDR*LVWD*VYGEQIPESITERVADGELSGIREQLLINSAIVNAYHQLGKESDR  5762

Range 6: 5593 to 5706 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.1 bits(116) 0.0 26/38(68%) 0/38(0%) Minus/Plus
Query       68  SSPS*WFALMMAPLMRSFFLMPLNSPSVTPLAMPSGIC  181
                S PS*W+AL MA LMRS  LMPL+SPS T   M SGIC
Subject   5593  SLPS*WYALTMALLMRSCSLMPLSSPSATLSVMLSGIC  5706

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: NC_034205.1 Length: 6730 Number of Matches: 6

Range 1: 5586 to 5771 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
152.7 bits(327) 0.0 62/62(100%) 0/62(0%) Minus/Plus
Query        3  VALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSVPYQSAVFDFFCRHASE  188
                VALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSVPYQSAVFDFFCRHASE
Subject   5586  VALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSVPYQSAVFDFFCRHASE  5771

Range 2: 5585 to 5773 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
124.8 bits(266) 0.0 55/63(87%) 0/63(0%) Plus/Minus
Query        1  SSDAWRQKKSKTADW*GTESIGSRFQKASPRE*PMENSVA*ERSFSSMVPSSTQTISLAKSAT  189
                SS+AWRQKKSKTADW GTES+GSRFQKASPRE PMENSVA*E SFSS+VPSST TISLAK AT
Subject   5585  SSEAWRQKKSKTADWYGTESMGSRFQKASPREWPMENSVA*ESSFSSIVPSSTHTISLAKRAT  5773

Range 3: 5581 to 5763 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
94.1 bits(199) 0.0 36/61(59%) 0/61(0%) Plus/Minus
Query       11  HGDRRSRKRRTGKGQSRSEADSRRHRQGSDRWRIQWHKKEASHQWCHHQRKPLAWRRVQPS  193
                HGDRRS++  TG G S   ADSR+H + S RWR QWHK+ ASHQ CH QR P AW+R +P+
Subject   5581  HGDRRSQRPLTGMGLSLWGADSRKHHRESGRWRTQWHKRAASHQ*CHRQRIPSAWQRERPA  5763

Range 4: 5585 to 5767 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.6 bits(174) 0.0 37/61(61%) 0/61(0%) Minus/Plus
Query        7  GCTLRQANGLR**WHH**EASFLCH*ILHRSLPWRCLLESASDRLCPLPVRRFRLLLSPCI  189
                G +L QA+G+R* WH+**EA+ LCH*+LHR L   C LESA  RL P+PV    LLLSPC+
Subject   5585  GRSLCQADGMR*RWHY**EAALLCH*VLHRPLSR*CFLESAPHRLSPIPVSGL*LLLSPCL  5767

Range 5: 5583 to 5762 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.8 bits(159) 0.0 36/60(60%) 0/60(0%) Plus/Minus
Query       12  MATEEVENGGLVRDRVDRKQIPEGIAKGVTDGEFSGIRKKLLINGAIINANH*LGEECNR  191
                MATEEV++  LV D V  +QIPE I + V DGE SGIR++LLIN AI+NA H LG+E +R
Subject   5583  MATEEVKDR*LVWD*VYGEQIPESITERVADGELSGIREQLLINSAIVNAYHQLGKESDR  5762

Range 6: 5593 to 5706 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.1 bits(116) 0.0 26/38(68%) 0/38(0%) Minus/Plus
Query       68  SSPS*WFALMMAPLMRSFFLMPLNSPSVTPLAMPSGIC  181
                S PS*W+AL MA LMRS  LMPL+SPS T   M SGIC
Subject   5593  SLPS*WYALTMALLMRSCSLMPLSSPSATLSVMLSGIC  5706

Grapevine rupestris vein feathering virus isolate CHASS, complete genome

Sequence ID: KY513702.1 Length: 6716 Number of Matches: 5

Range 1: 5587 to 5772 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
150.9 bits(323) 0.0 61/62(98%) 0/62(0%) Minus/Plus
Query        3  VALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSVPYQSAVFDFFCRHASE  188
                VALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPI+SVPYQSAVFDFFCRHASE
Subject   5587  VALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPIESVPYQSAVFDFFCRHASE  5772

Range 2: 5586 to 5774 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
119.7 bits(255) 0.0 54/63(86%) 0/63(0%) Plus/Minus
Query        1  SSDAWRQKKSKTADW*GTESIGSRFQKASPRE*PMENSVA*ERSFSSMVPSSTQTISLAKSAT  189
                SS+AWRQKKSKTAD *GT+S+GSRFQKASPRE*P+ENSVA E SFSSMVPSSTQT+SLA SAT
Subject   5586  SSEAWRQKKSKTAD**GTDSMGSRFQKASPRE*PIENSVAYESSFSSMVPSSTQTMSLANSAT  5774

Range 3: 5593 to 5763 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.9 bits(168) 0.0 29/57(51%) 0/57(0%) Plus/Minus
Query       12  MATEEVENGGLVRDRVDRKQIPEGIAKGVTDGEFSGIRKKLLINGAIINANH*LGEE  182
                +ATEE+++ GL+RDR D +QIPEG+ + +TD E SGIR++LL++GA+++ +H  GE+
Subject   5593  VATEEIKDSGLIRDRFDGEQIPEGVTERMTD*ELSGIREQLLVDGAVVHTDHEFGEQ  5763

Range 4: 5597 to 5770 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
74.8 bits(157) 0.0 28/58(48%) 0/58(0%) Plus/Minus
Query        5  LMHGDRRSRKRRTGKGQSRSEADSRRHRQGSDRWRIQWHKKEASHQWCHHQRKPLAWR  178
                L  GDRR++++R  KGQ R  ADSRR  + +DR R QWH + AS +WC    +P  WR
Subject   5597  LKRGDRRNQRQRIDKGQIRWGADSRRRHRENDRLRTQWHTRAASRRWCRRPHRP*VWR  5770

Range 5: 5595 to 5771 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.0 bits(118) 0.0 29/59(49%) 0/59(0%) Minus/Plus
Query        4  LRQANGLR**WHH**EASFLCH*ILHRSLPWRCLLESASDRLCPLPVRRFRLLLSPCIR  180
                +RQ +GL    HH  EA+ +CH*+L+RS     LLESA  R+CPL +R    LLSP  R
Subject   5595  VRQTHGLCGRRHHRREAALVCH*VLNRSFSR*RLLESAPHRICPLSIRCL*FLLSPRFR  5771

Grapevine rupestris vein feathering virus isolate TRAJ3 BR polyprotein gene, partial cds

Sequence ID: KX828705.1 Length: 6549 Number of Matches: 6

Range 1: 5528 to 5713 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
149.5 bits(320) 0.0 60/62(97%) 0/62(0%) Minus/Plus
Query        3  VALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSVPYQSAVFDFFCRHASE  188
                VALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGD+FWNLLPI+SVPYQSAVFDFFCRHASE
Subject   5528  VALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDSFWNLLPIESVPYQSAVFDFFCRHASE  5713

Range 2: 5527 to 5715 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
115.6 bits(246) 0.0 54/63(86%) 0/63(0%) Plus/Minus
Query        1  SSDAWRQKKSKTADW*GTESIGSRFQKASPRE*PMENSVA*ERSFSSMVPSSTQTISLAKSAT  189
                SS+A RQKKSKTAD  GT+SIGS+FQK SPRE*P+ENSVA*ERSFSSMVPSSTQT+SLAKSAT
Subject   5527  SSEA*RQKKSKTAD*YGTDSIGSKFQKESPRE*PIENSVA*ERSFSSMVPSSTQTMSLAKSAT  5715

Range 3: 5534 to 5704 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
81.7 bits(172) 0.0 31/57(54%) 0/57(0%) Plus/Minus
Query       12  MATEEVENGGLVRDRVDRKQIPEGIAKGVTDGEFSGIRKKLLINGAIINANH*LGEE  182
                + T+EV++ GL+R  +D KQ+PEG+ KGVT+ EF G+R++LLINGAI++ NH LG++
Subject   5534  VTTKEVKDCGLIRHGLDWKQVPEGVTKGVTNREFGGVREELLINGAIVHTNHELGKK  5704

Range 4: 5529 to 5699 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.0 bits(166) 0.0 29/57(51%) 0/57(0%) Plus/Minus
Query       17  DRRSRKRRTGKGQSRSEADSRRHRQGSDRWRIQWHKKEASHQWCHHQRKPLAWRRVQ  187
                D+RS++ R    ++R EA SRR  QGSD+ RI+W K+ ASHQWCH   KP AW++ +
Subject   5529  DKRSQRLRIDTARTRLEASSRRSHQGSDQ*RIRWRKRGASHQWCHRPHKP*AWQKAR  5699

Range 5: 5542 to 5700 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.9 bits(120) 0.0 30/53(57%) 0/53(0%) Minus/Plus
Query       16  QANGLR**WHH**EASFLCH*ILHRSLPWRCLLESASDRLCPLPVRRFRLLLS  174
                QA+GL   WHH**EA  L H IL+ SLPW  LLE AS+R+  + +R   LLLS
Subject   5542  QAHGLCGRWHH**EAPLLRHRILYWSLPW*LLLELASNRVRAVSIRSL*LLLS  5700

Range 6: 5541 to 5654 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.1 bits(114) 0.0 24/38(63%) 0/38(0%) Minus/Plus
Query       62  PS*WFALMMAPLMRSFFLMPLNSPSVTPLAMPSGICFR  175
                PS WF   MAPLMRS  L P NS  VTPL  PSG CF+
Subject   5541  PSSWFVWTMAPLMRSSSLTPPNSLLVTPLVTPSGTCFQ  5654

Grapevine rupestris vein feathering virus replicase associated polyprotein mRNA, partial cds

Sequence ID: AY128949.1 Length: 1791 Number of Matches: 6

Range 1: 639 to 824 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
144.5 bits(309) 0.0 56/62(90%) 0/62(0%) Minus/Plus
Query        3  VALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSVPYQSAVFDFFCRHASE  188
                VALFAKLMVCVDDGTIDEK++SYATEFSIGHSLGDAFWNLLP+++VPYQSAVFDFFCRHA E
Subject    639  VALFAKLMVCVDDGTIDEKMISYATEFSIGHSLGDAFWNLLPLEAVPYQSAVFDFFCRHAPE  824

Range 2: 638 to 826 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
117.9 bits(251) 0.0 54/63(86%) 0/63(0%) Plus/Minus
Query        1  SSDAWRQKKSKTADW*GTESIGSRFQKASPRE*PMENSVA*ERSFSSMVPSSTQTISLAKSAT  189
                SS AWRQKKSKTADW*GT S G RFQKASPRE PMENSVA*E  FSSMVPSSTQT+SLAK AT
Subject    638  SSGAWRQKKSKTADW*GTASRGRRFQKASPRECPMENSVA*EIIFSSMVPSSTQTMSLAKRAT  826

Range 3: 646 to 816 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.4 bits(215) 0.0 37/57(65%) 0/57(0%) Plus/Minus
Query       11  HGDRRSRKRRTGKGQSRSEADSRRHRQGSDRWRIQWHKKEASHQWCHHQRKPLAWRR  181
                HG RRSRK  TGK Q + E  SRRHRQGS RWRI+WH+K   HQWC  QRKP AW++
Subject    646  HGGRRSRKPLTGKAQPQEEGGSRRHRQGSARWRIRWHRKSFFHQWCRRQRKP*AWQK  816

Range 4: 653 to 817 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
86.3 bits(182) 0.0 38/55(69%) 0/55(0%) Minus/Plus
Query       10  QANGLR**WHH**EASFLCH*ILHRSLPWRCLLESASDRLCPLPVRRFRLLLSPC  174
                QA+GLR*  HH**+  FLCH ILHR+LPWRCLLE  S   C LPV  FRLLL PC
Subject    653  QAHGLR*RRHH**KNDFLCHRILHRALPWRCLLEPPSS*GCALPVSGFRLLLPPC  817

Range 5: 645 to 815 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
86.3 bits(182) 0.0 36/57(63%) 0/57(0%) Plus/Minus
Query       12  MATEEVENGGLVRDRVDRKQIPEGIAKGVTDGEFSGIRKKLLINGAIINANH*LGEE  182
                MA EEVEN  LVR  + RK++PEGIAKGV DGEF GI     INGA++NANH LG++
Subject    645  MAAEEVENR*LVRHSLKRKEVPEGIAKGVPDGEFGGIGNHFFINGAVVNANHELGKK  815

Range 6: 652 to 762 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.7 bits(124) 0.0 26/37(70%) 0/37(0%) Minus/Plus
Query       65  PS*WFALMMAPLMRSFFLMPLNSPSVTPLAMPSGICF  175
                PS WFAL  APLM+  F MP NSPS TPLAMPSG  F
Subject    652  PSSWFALTTAPLMKK*FPMPPNSPSGTPLAMPSGTSF  762

Nucleotide Sequence (199 letters)

Query ID:ds2015-149_49
Query definition:No definition line
Query length:122
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 18 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
20
40
60
80
100
120
140
160
180
199

Descriptions

Alignments

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: KY513701.1 Length: 6730 Number of Matches: 6

Range 1: 5676 to 5873 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
163.7 bits(351) 0.0 66/66(100%) 0/66(0%) Plus/Plus
Query        2  HSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSML  199
                HSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSML
Subject   5676  HSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSML  5873

Range 2: 5678 to 5872 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
119.7 bits(255) 0.0 53/65(82%) 0/65(0%) Minus/Minus
Query        4  SME*VE*DSQDSLWSR*ENRETSTRPNLNMTLISSDAWRQKKSKTADW*GTESIGSRFQKASPRE  198
                SME*VE +SQ+SL SR E  ETSTRP+LN+TLISS+AWRQKKSKTADW GTES+GSRFQKASPRE
Subject   5678  SME*VEYESQESL*SRWEKSETSTRPSLNITLISSEAWRQKKSKTADWYGTESMGSRFQKASPRE  5872

Range 3: 5677 to 5871 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.8 bits(170) 0.0 37/65(57%) 0/65(0%) Minus/Minus
Query        3  AWSKWSRTAKTACGADERTGRLRRDPT*T*P*YLLMHGDRRSRKRRTGKGQSRSEADSRRHRQGS  197
                AWS+WS  A+ AC A  R  RLR DP *T*P*Y   HGDRRS++  TG G S   ADSR+H + S
Subject   5677  AWSRWSMRARRACEAGGRKVRLRHDPA*T*P*YPPRHGDRRSQRPLTGMGLSLWGADSRKHHRES  5871

Range 4: 5676 to 5873 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.5 bits(165) 0.0 38/66(58%) 0/66(0%) Minus/Minus
Query        2  EHGVSGVGQPRQLVEQMREQGDFDATQLEHDLDIF*CMATEEVENGGLVRDRVDRKQIPEGIAKGV  199
                EHGV GV +P +LV+Q+ E+ DFD TQLEH+LDI   MATEEV++  LV D V  +QIPE I + V
Subject   5676  EHGVGGV*EPGELVKQVGEK*DFDTTQLEHNLDILRGMATEEVKDR*LVWD*VYGEQIPESITERV  5873

Range 5: 5690 to 5836 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.4 bits(132) 0.0 29/49(59%) 0/49(0%) Plus/Plus
Query       16  CLLESASDRLCPLPVRRFRLLLSPCIRRYQGHVQVGSRRSLPVLSSAPQ  162
                C LESA  RL P+PV    LLLSPC+  YQG+VQ GS RSL  L  A Q
Subject   5690  CFLESAPHRLSPIPVSGL*LLLSPCLGGYQGYVQAGSCRSLTFLPPASQ  5836

Range 6: 5755 to 5871 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.8 bits(111) 0.0 24/39(62%) 0/39(0%) Plus/Plus
Query       81  VAMHQKISRSCSSWVASKSPCSLICSTSCLGCPTPLTPC  197
                VAM ++ISR CSSWV SKS  S  C TS  G  TP TPC
Subject   5755  VAMPRRISRLCSSWVVSKSHFSPTCFTSSPGSHTPPTPC  5871

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: NC_034205.1 Length: 6730 Number of Matches: 6

Range 1: 5676 to 5873 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
163.7 bits(351) 0.0 66/66(100%) 0/66(0%) Plus/Plus
Query        2  HSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSML  199
                HSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSML
Subject   5676  HSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSML  5873

Range 2: 5678 to 5872 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
119.7 bits(255) 0.0 53/65(82%) 0/65(0%) Minus/Minus
Query        4  SME*VE*DSQDSLWSR*ENRETSTRPNLNMTLISSDAWRQKKSKTADW*GTESIGSRFQKASPRE  198
                SME*VE +SQ+SL SR E  ETSTRP+LN+TLISS+AWRQKKSKTADW GTES+GSRFQKASPRE
Subject   5678  SME*VEYESQESL*SRWEKSETSTRPSLNITLISSEAWRQKKSKTADWYGTESMGSRFQKASPRE  5872

Range 3: 5677 to 5871 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.8 bits(170) 0.0 37/65(57%) 0/65(0%) Minus/Minus
Query        3  AWSKWSRTAKTACGADERTGRLRRDPT*T*P*YLLMHGDRRSRKRRTGKGQSRSEADSRRHRQGS  197
                AWS+WS  A+ AC A  R  RLR DP *T*P*Y   HGDRRS++  TG G S   ADSR+H + S
Subject   5677  AWSRWSMRARRACEAGGRKVRLRHDPA*T*P*YPPRHGDRRSQRPLTGMGLSLWGADSRKHHRES  5871

Range 4: 5676 to 5873 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.5 bits(165) 0.0 38/66(58%) 0/66(0%) Minus/Minus
Query        2  EHGVSGVGQPRQLVEQMREQGDFDATQLEHDLDIF*CMATEEVENGGLVRDRVDRKQIPEGIAKGV  199
                EHGV GV +P +LV+Q+ E+ DFD TQLEH+LDI   MATEEV++  LV D V  +QIPE I + V
Subject   5676  EHGVGGV*EPGELVKQVGEK*DFDTTQLEHNLDILRGMATEEVKDR*LVWD*VYGEQIPESITERV  5873

Range 5: 5690 to 5836 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.4 bits(132) 0.0 29/49(59%) 0/49(0%) Plus/Plus
Query       16  CLLESASDRLCPLPVRRFRLLLSPCIRRYQGHVQVGSRRSLPVLSSAPQ  162
                C LESA  RL P+PV    LLLSPC+  YQG+VQ GS RSL  L  A Q
Subject   5690  CFLESAPHRLSPIPVSGL*LLLSPCLGGYQGYVQAGSCRSLTFLPPASQ  5836

Range 6: 5755 to 5871 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.8 bits(111) 0.0 24/39(62%) 0/39(0%) Plus/Plus
Query       81  VAMHQKISRSCSSWVASKSPCSLICSTSCLGCPTPLTPC  197
                VAM ++ISR CSSWV SKS  S  C TS  G  TP TPC
Subject   5755  VAMPRRISRLCSSWVVSKSHFSPTCFTSSPGSHTPPTPC  5871

Grapevine rupestris vein feathering virus isolate CHASS, complete genome

Sequence ID: KY513702.1 Length: 6716 Number of Matches: 6

Range 1: 5677 to 5874 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
160.5 bits(344) 0.0 64/66(97%) 0/66(0%) Plus/Plus
Query        2  HSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSML  199
                HSLGDAFWNLLPI+SVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLH+LSWLSYSTYSML
Subject   5677  HSLGDAFWNLLPIESVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHRLSWLSYSTYSML  5874

Range 2: 5676 to 5873 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.4 bits(252) 0.0 54/66(82%) 0/66(0%) Minus/Minus
Query        1  SME*VE*DSQDSLWSR*ENRETSTRPNLNMTLISSDAWRQKKSKTADW*GTESIGSRFQKASPRE*  198
                SME*VE +SQ+SL S+*E RETSTRP+LNMTL+SS+AWRQKKSKTAD *GT+S+GSRFQKASPRE*
Subject   5676  SME*VEYESQESL*SK*EKRETSTRPSLNMTLMSSEAWRQKKSKTAD**GTDSMGSRFQKASPRE*  5873

Range 3: 5683 to 5874 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
102.3 bits(217) 0.0 39/64(61%) 0/64(0%) Minus/Minus
Query        8  EHGVSGVGQPRQLVEQMREQGDFDATQLEHDLDIF*CMATEEVENGGLVRDRVDRKQIPEGIAK  199
                EHGVSGV +P + V+Q+RE+GDFDAT+LEHD D+ * +ATEE+++ GL+RDR D +QIPEG+ +
Subject   5683  EHGVSGV*EPGEPVKQVREEGDFDATKLEHDFDVL*SVATEEIKDSGLIRDRFDGEQIPEGVTE  5874

Range 4: 5684 to 5872 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.9 bits(168) 0.0 37/63(59%) 0/63(0%) Minus/Minus
Query        9  AWSKWSRTAKTACGADERTGRLRRDPT*T*P*YLLMHGDRRSRKRRTGKGQSRSEADSRRHRQ  197
                AWSKWS  A+ AC A ER GRLRRD  *T* *  L  GDRR++++R  KGQ R  ADSRR  +
Subject   5684  AWSKWSMRARRACEASERRGRLRRDQA*T*L*CPLKRGDRRNQRQRIDKGQIRWGADSRRRHR  5872

Range 5: 5694 to 5837 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.9 bits(131) 0.0 29/48(60%) 0/48(0%) Plus/Plus
Query       19  LLESASDRLCPLPVRRFRLLLSPCIRRYQGHVQVGSRRSLPVLSSAPQ  162
                LLESA  R+CPL +R    LLSP  R +Q HVQ  SRRSLP+LS A Q
Subject   5694  LLESAPHRICPLSIRCL*FLLSPRFRGHQSHVQAWSRRSLPLLSLASQ  5837

Range 6: 5756 to 5872 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.5 bits(117) 0.0 25/39(64%) 0/39(0%) Plus/Plus
Query       81  VAMHQKISRSCSSWVASKSPCSLICSTSCLGCPTPLTPC  197
                VA  Q+ S+SCSS VASKSP SL C T   G  TPLTPC
Subject   5756  VATLQRTSKSCSSLVASKSPSSLTCFTGSPGSHTPLTPC  5872

Grapevine rupestris vein feathering virus isolate TRAJ3 BR polyprotein gene, partial cds

Sequence ID: KX828705.1 Length: 6549 Number of Matches: 7

Range 1: 5618 to 5815 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
160.1 bits(343) 0.0 63/66(95%) 0/66(0%) Plus/Plus
Query        2  HSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSML  199
                HSLGD+FWNLLPI+SVPYQSAVFDFFCRHASEDIKVMFKLGRVE+SLFSHLLHKLSWLSYSTYSML
Subject   5618  HSLGDSFWNLLPIESVPYQSAVFDFFCRHASEDIKVMFKLGRVEISLFSHLLHKLSWLSYSTYSML  5815

Range 2: 5617 to 5814 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
109.2 bits(232) 0.0 53/66(80%) 0/66(0%) Minus/Minus
Query        1  SME*VE*DSQDSLWSR*ENRETSTRPNLNMTLISSDAWRQKKSKTADW*GTESIGSRFQKASPRE*  198
                SME*VE*DSQ+SL SR*E RE STRP+LN+TLISS+A RQKKSKTAD  GT+SIGS+FQK SPRE*
Subject   5617  SME*VE*DSQESL*SR*EKREISTRPSLNITLISSEA*RQKKSKTAD*YGTDSIGSKFQKESPRE*  5814

Range 3: 5618 to 5815 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
93.6 bits(198) 0.0 38/66(58%) 0/66(0%) Minus/Minus
Query        2  EHGVSGVGQPRQLVEQMREQGDFDATQLEHDLDIF*CMATEEVENGGLVRDRVDRKQIPEGIAKGV  199
                EHGVSGV QP +LV+QMRE+ D DA +LEH  DI   + T+EV++ GL+R  +D KQ+PEG+ KGV
Subject   5618  EHGVSGVRQPGELVKQMREERDLDAAELEHHFDILRSVTTKEVKDCGLIRHGLDWKQVPEGVTKGV  5815

Range 4: 5619 to 5813 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.1 bits(151) 0.0 34/65(52%) 0/65(0%) Minus/Minus
Query        3  AWSKWSRTAKTACGADERTGRLRRDPT*T*P*YLLMHGDRRSRKRRTGKGQSRSEADSRRHRQGS  197
                AWSKWS+TA+ AC ADER  R RR   *T  *Y     D+RS++ R    ++R EA SRR  QGS
Subject   5619  AWSKWSKTARRACEADERRERSRRGRA*TSL*YPQKRDDKRSQRLRIDTARTRLEASSRRSHQGS  5813

Range 5: 5712 to 5813 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.0 bits(105) 0.0 22/34(65%) 0/34(0%) Plus/Plus
Query       96  KISRSCSSWVASKSPCSLICSTSCLGCPTPLTPC  197
                +IS+ CSS  AS+S  SLIC TS  GC TPLTPC
Subject   5712  RISK*CSSSAASRSLSSLICFTSSPGCLTPLTPC  5813

Range 6: 5619 to 5654 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.4 bits(47) 0.0 8/12(67%) 0/12(0%) Plus/Plus
Query        3  TPLAMPSGICFR  38
                TPL  PSG CF+
Subject   5619  TPLVTPSGTCFQ  5654

Range 7: 5617 to 5778 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.1 bits(103) 0.0 27/54(50%) 0/54(0%) Plus/Plus
Query        1  SLPWRCLLESASDRLCPLPVRRFRLLLSPCIRRYQGHVQVGSRRSLPVLSSAPQ  162
                SLPW  LLE AS+R+  + +R   LLLS     YQ  VQ   RR L +LSSA Q
Subject   5617  SLPW*LLLELASNRVRAVSIRSL*LLLSSRF*GYQSDVQARPRRDLSLLSSASQ  5778

Grapevine rupestris vein feathering virus polyprotein gene, complete cds

Sequence ID: AY706994.1 Length: 6617 Number of Matches: 5

Range 1: 5520 to 5717 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
146.3 bits(313) 0.0 57/66(86%) 0/66(0%) Plus/Plus
Query        2  HSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSML  199
                HSLGDAFWNLLPID+VP+QSAVFDFFCRHA ED+KVMFKLGRVEVSLFSHLL KL+WLSYS+Y+ L
Subject   5520  HSLGDAFWNLLPIDAVPFQSAVFDFFCRHAPEDVKVMFKLGRVEVSLFSHLLSKLTWLSYSSYAYL  5717

Range 2: 5522 to 5701 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
106.0 bits(225) 0.0 47/60(78%) 0/60(0%) Minus/Minus
Query        4  E*DSQDSLWSR*ENRETSTRPNLNMTLISSDAWRQKKSKTADW*GTESIGSRFQKASPRE  183
                E +SQ SL SR E R+TSTRPNLNMTL SS AWRQKKSKTADW GT S+G RFQKASPRE
Subject   5522  EYESQVSLESRWEKRDTSTRPNLNMTLTSSGAWRQKKSKTADWNGTASMGRRFQKASPRE  5701

Range 3: 5520 to 5711 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.9 bits(179) 0.0 35/64(55%) 0/64(0%) Minus/Minus
Query        2  GVSGVGQPRQLVEQMREQGDFDATQLEHDLDIF*CMATEEVENGGLVRDRVDRKQIPEGIAKGV  193
                G+ GV +P +L EQM E+  F+ATQLEHD DI   +A EEVE+GGL  D +D ++IP+G+A+GV
Subject   5520  GIGGVREPSELGEQMGEERHFNATQLEHDFDILRRVAAEEVEDGGLEWDSIDGEEIPKGVAEGV  5711

Range 4: 5521 to 5700 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
64.3 bits(134) 0.0 34/60(57%) 0/60(0%) Minus/Minus
Query        3  SRTAKTACGADERTGRLRRDPT*T*P*YLLMHGDRRSRKRRTGKGQSRSEADSRRHRQGS  182
                S  AK A  AD R   L+RDPT*T* *+    G RRSR+RRTG GQ R   DS+R R+GS
Subject   5521  STRAK*AWRADGRRETLQRDPT*T*L*HPQARGGRRSRRRRTGMGQHRWGGDSKRRRRGS  5700

Range 5: 5522 to 5680 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.8 bits(133) 0.0 32/53(60%) 0/53(0%) Plus/Plus
Query        4  LPWRCLLESASDRLCPLPVRRFRLLLSPCIRRYQGHVQVGSRRSLPVLSSAPQ  162
                LP R LLES   R CP+PVRR RLLL P     Q HVQVGSR S+ +L SA Q
Subject   5522  LPRRRLLESPPHRCCPIPVRRLRLLLPPRA*GCQSHVQVGSR*SVSLLPSALQ  5680

Nucleotide Sequence (199 letters)

Query ID:ds2015-149_49
Query definition:No definition line
Query length:122
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 18 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
20
40
60
80
100
120
140
160
180
199

Descriptions

Alignments

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: KY513701.1 Length: 6730 Number of Matches: 4

Range 1: 5625 to 5822 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
156.4 bits(335) 0.0 65/66(98%) 0/66(0%) Plus/Plus
Query        1  GTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSVSYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFS  198
                GTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSV YQSAVFDFFCRHASEDIKVMFKLGRVEVSLFS
Subject   5625  GTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFS  5822

Range 2: 5627 to 5821 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
122.5 bits(261) 0.0 53/65(82%) 0/65(0%) Minus/Minus
Query        3  ENRETSTRPNLNMTLMSSDAWRQKKSKTADW*ETESIGSRFQKASPRE*PMENSVA*ERSFSSMV  197
                E  ETSTRP+LN+TL+SS+AWRQKKSKTADW  TES+GSRFQKASPRE PMENSVA*E SFSS+V
Subject   5627  EKSETSTRPSLNITLISSEAWRQKKSKTADWYGTESMGSRFQKASPREWPMENSVA*ESSFSSIV  5821

Range 3: 5625 to 5822 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.5 bits(178) 0.0 38/66(58%) 0/66(0%) Minus/Minus
Query        1  GKQGDFDTTQLEHDLDVF*CMATEEIENGGLVRDRVDRKQIPEGVAKGVTDGEFSGIRKKLLINGA  198
                G++ DFDTTQLEH+LD+   MATEE+++  LV D V  +QIPE + + V DGE SGIR++LLIN A
Subject   5625  GEK*DFDTTQLEHNLDILRGMATEEVKDR*LVWD*VYGEQIPESITERVADGELSGIREQLLINSA  5822

Range 4: 5627 to 5812 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.0 bits(164) 0.0 36/62(58%) 0/62(0%) Plus/Plus
Query        3  HH**EASFLCH*ILHRSLPWRRLLESASDRLCLLPVRRFRFLLSPCIRRHQGHVQVGSCRSL  188
                H+**EA+ LCH*+LHR L     LESA  RL  +PV     LLSPC+  +QG+VQ GSCRSL
Subject   5627  HY**EAALLCH*VLHRPLSR*CFLESAPHRLSPIPVSGL*LLLSPCLGGYQGYVQAGSCRSL  5812

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: NC_034205.1 Length: 6730 Number of Matches: 4

Range 1: 5625 to 5822 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
156.4 bits(335) 0.0 65/66(98%) 0/66(0%) Plus/Plus
Query        1  GTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSVSYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFS  198
                GTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSV YQSAVFDFFCRHASEDIKVMFKLGRVEVSLFS
Subject   5625  GTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFS  5822

Range 2: 5627 to 5821 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
122.5 bits(261) 0.0 53/65(82%) 0/65(0%) Minus/Minus
Query        3  ENRETSTRPNLNMTLMSSDAWRQKKSKTADW*ETESIGSRFQKASPRE*PMENSVA*ERSFSSMV  197
                E  ETSTRP+LN+TL+SS+AWRQKKSKTADW  TES+GSRFQKASPRE PMENSVA*E SFSS+V
Subject   5627  EKSETSTRPSLNITLISSEAWRQKKSKTADWYGTESMGSRFQKASPREWPMENSVA*ESSFSSIV  5821

Range 3: 5625 to 5822 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.5 bits(178) 0.0 38/66(58%) 0/66(0%) Minus/Minus
Query        1  GKQGDFDTTQLEHDLDVF*CMATEEIENGGLVRDRVDRKQIPEGVAKGVTDGEFSGIRKKLLINGA  198
                G++ DFDTTQLEH+LD+   MATEE+++  LV D V  +QIPE + + V DGE SGIR++LLIN A
Subject   5625  GEK*DFDTTQLEHNLDILRGMATEEVKDR*LVWD*VYGEQIPESITERVADGELSGIREQLLINSA  5822

Range 4: 5627 to 5812 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
78.0 bits(164) 0.0 36/62(58%) 0/62(0%) Plus/Plus
Query        3  HH**EASFLCH*ILHRSLPWRRLLESASDRLCLLPVRRFRFLLSPCIRRHQGHVQVGSCRSL  188
                H+**EA+ LCH*+LHR L     LESA  RL  +PV     LLSPC+  +QG+VQ GSCRSL
Subject   5627  HY**EAALLCH*VLHRPLSR*CFLESAPHRLSPIPVSGL*LLLSPCLGGYQGYVQAGSCRSL  5812

Grapevine rupestris vein feathering virus isolate CHASS, complete genome

Sequence ID: KY513702.1 Length: 6716 Number of Matches: 5

Range 1: 5626 to 5823 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
154.6 bits(331) 0.0 64/66(97%) 0/66(0%) Plus/Plus
Query        1  GTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSVSYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFS  198
                GTIDEKLLSYATEFSIGHSLGDAFWNLLPI+SV YQSAVFDFFCRHASEDIKVMFKLGRVEVSLFS
Subject   5626  GTIDEKLLSYATEFSIGHSLGDAFWNLLPIESVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFS  5823

Range 2: 5628 to 5822 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
123.0 bits(262) 0.0 55/65(85%) 0/65(0%) Minus/Minus
Query        3  ENRETSTRPNLNMTLMSSDAWRQKKSKTADW*ETESIGSRFQKASPRE*PMENSVA*ERSFSSMV  197
                E RETSTRP+LNMTLMSS+AWRQKKSKTAD * T+S+GSRFQKASPRE*P+ENSVA E SFSSMV
Subject   5628  EKRETSTRPSLNMTLMSSEAWRQKKSKTAD**GTDSMGSRFQKASPRE*PIENSVAYESSFSSMV  5822

Range 3: 5626 to 5820 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
99.6 bits(211) 0.0 40/65(62%) 0/65(0%) Minus/Minus
Query        1  KQGDFDTTQLEHDLDVF*CMATEEIENGGLVRDRVDRKQIPEGVAKGVTDGEFSGIRKKLLINGA  195
                ++GDFD T+LEHD DV * +ATEEI++ GL+RDR D +QIPEGV + +TD E SGIR++LL++GA
Subject   5626  EEGDFDATKLEHDFDVL*SVATEEIKDSGLIRDRFDGEQIPEGVTERMTD*ELSGIREQLLVDGA  5820

Range 4: 5628 to 5819 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
77.1 bits(162) 0.0 36/64(56%) 0/64(0%) Plus/Plus
Query        3  HH**EASFLCH*ILHRSLPWRRLLESASDRLCLLPVRRFRFLLSPCIRRHQGHVQVGSCRSLPV  194
                HH  EA+ +CH*+L+RS    RLLESA  R+C L +R   FLLSP  R HQ HVQ  S RSLP+
Subject   5628  HHRREAALVCH*VLNRSFSR*RLLESAPHRICPLSIRCL*FLLSPRFRGHQSHVQAWSRRSLPL  5819

Range 5: 5627 to 5776 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.4 bits(108) 0.0 28/50(56%) 0/50(0%) Plus/Plus
Query        2  APLMRSFFLMPLNSPSVTPLATPSGICFRSTLSLTSPPFSISSVAMHQKT  151
                AP  RS   MPL+S SV    TPSGIC  S LSL +P   ISSVA  Q+T
Subject   5627  APSTRSCSRMPLSSQSVILSVTPSGICSPSNLSLINPLSLISSVATLQRT  5776

Grapevine rupestris vein feathering virus isolate TRAJ3 BR polyprotein gene, partial cds

Sequence ID: KX828705.1 Length: 6549 Number of Matches: 5

Range 1: 5567 to 5764 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
152.7 bits(327) 0.0 62/66(94%) 0/66(0%) Plus/Plus
Query        1  GTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSVSYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFS  198
                GTIDEKLLSYATEFSIGHSLGD+FWNLLPI+SV YQSAVFDFFCRHASEDIKVMFKLGRVE+SLFS
Subject   5567  GTIDEKLLSYATEFSIGHSLGDSFWNLLPIESVPYQSAVFDFFCRHASEDIKVMFKLGRVEISLFS  5764

Range 2: 5569 to 5763 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
110.1 bits(234) 0.0 51/65(78%) 0/65(0%) Minus/Minus
Query        3  ENRETSTRPNLNMTLMSSDAWRQKKSKTADW*ETESIGSRFQKASPRE*PMENSVA*ERSFSSMV  197
                E RE STRP+LN+TL+SS+A RQKKSKTAD   T+SIGS+FQK SPRE*P+ENSVA*ERSFSSMV
Subject   5569  EKREISTRPSLNITLISSEA*RQKKSKTAD*YGTDSIGSKFQKESPRE*PIENSVA*ERSFSSMV  5763

Range 3: 5567 to 5761 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.0 bits(177) 0.0 32/65(49%) 0/65(0%) Minus/Minus
Query        1  KQGDFDTTQLEHDLDVF*CMATEEIENGGLVRDRVDRKQIPEGVAKGVTDGEFSGIRKKLLINGA  195
                ++ D D  +LEH  D+   + T+E+++ GL+R  +D KQ+PEGV KGVT+ EF G+R++LLINGA
Subject   5567  EERDLDAAELEHHFDILRSVTTKEVKDCGLIRHGLDWKQVPEGVTKGVTNREFGGVREELLINGA  5761

Range 4: 5569 to 5754 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.1 bits(103) 0.0 29/62(47%) 0/62(0%) Plus/Plus
Query        3  HH**EASFLCH*ILHRSLPWRRLLESASDRLCLLPVRRFRFLLSPCIRRHQGHVQVGSCRSL  188
                HH**EA  L H IL+ SLPW  LLE AS+R+  + +R    LLS     +Q  VQ    R L
Subject   5569  HH**EAPLLRHRILYWSLPW*LLLELASNRVRAVSIRSL*LLLSSRF*GYQSDVQARPRRDL  5754

Range 5: 5568 to 5678 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 22/37(59%) 0/37(0%) Plus/Plus
Query        2  APLMRSFFLMPLNSPSVTPLATPSGICFRSTLSLTSP  112
                APLMRS  L P NS  VTPL TPSG CF+S+    +P
Subject   5568  APLMRSSSLTPPNSLLVTPLVTPSGTCFQSSPCRINP  5678

Grapevine rupestris vein feathering virus polyprotein gene, complete cds

Sequence ID: AY706994.1 Length: 6617 Number of Matches: 5

Range 1: 5469 to 5666 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
146.8 bits(314) 0.0 58/66(88%) 0/66(0%) Plus/Plus
Query        1  GTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSVSYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFS  198
                GTI+EK++SYATEFSIGHSLGDAFWNLLPID+V +QSAVFDFFCRHA ED+KVMFKLGRVEVSLFS
Subject   5469  GTIEEKMISYATEFSIGHSLGDAFWNLLPIDAVPFQSAVFDFFCRHAPEDVKVMFKLGRVEVSLFS  5666

Range 2: 5471 to 5665 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.8 bits(253) 0.0 53/65(82%) 0/65(0%) Minus/Minus
Query        3  ENRETSTRPNLNMTLMSSDAWRQKKSKTADW*ETESIGSRFQKASPRE*PMENSVA*ERSFSSMV  197
                E R+TSTRPNLNMTL SS AWRQKKSKTADW  T S+G RFQKASPRE PMENSVA*E  FSSMV
Subject   5471  EKRDTSTRPNLNMTLTSSGAWRQKKSKTADWNGTASMGRRFQKASPREWPMENSVA*EIIFSSMV  5665

Range 3: 5469 to 5666 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
87.2 bits(184) 0.0 34/66(52%) 0/66(0%) Minus/Minus
Query        1  GKQGDFDTTQLEHDLDVF*CMATEEIENGGLVRDRVDRKQIPEGVAKGVTDGEFSGIRKKLLINGA  198
                G++  F+ TQLEHD D+   +A EE+E+GGL  D +D ++IP+GVA+GV +GEF GIR  L ++GA
Subject   5469  GEERHFNATQLEHDFDILRRVAAEEVEDGGLEWDSIDGEEIPKGVAEGVANGEFGGIRNHLFLDGA  5666

Range 4: 5471 to 5644 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.2 bits(149) 0.0 34/58(59%) 0/58(0%) Plus/Plus
Query        3  HH**EASFLCH*ILHRSLPWRRLLESASDRLCLLPVRRFRFLLSPCIRRHQGHVQVGS  176
                HH  +  FLCH ILH  LP RRLLES   R C +PVRR R LL P     Q HVQVGS
Subject   5471  HHRGKDDFLCHRILHWPLPRRRLLESPPHRCCPIPVRRLRLLLPPRA*GCQSHVQVGS  5644

Range 5: 5470 to 5604 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.4 bits(108) 0.0 26/45(58%) 0/45(0%) Plus/Plus
Query        2  APLMRSFFLMPLNSPSVTPLATPSGICFRSTLSLTSPPFSISSVA  136
                AP  +  FLMP NSP  TP ATP GI   S LS +SPP S SS A
Subject   5470  APSRKR*FLMPPNSPLATPSATPFGISSPSMLSHSSPPSSTSSAA  5604

Nucleotide Sequence (115 letters)

Query ID:ds2015-149_49
Query definition:No definition line
Query length:122
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 18 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
12
24
36
48
60
72
84
96
108
115

Descriptions

Alignments

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: KY513701.1 Length: 6730 Number of Matches: 3

Range 1: 5676 to 5789 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.2 bits(208) 0.0 38/38(100%) 0/38(0%) Plus/Plus
Query        2  HSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMF  115
                HSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMF
Subject   5676  HSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMF  5789

Range 2: 5678 to 5788 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.8 bits(170) 0.0 32/37(86%) 0/37(0%) Minus/Minus
Query        4  NMTLMSSDAWRQKKSKTADW*GTESIGSRFQKASPRE  114
                N+TL+SS+AWRQKKSKTADW GTES+GSRFQKASPRE
Subject   5678  NITLISSEAWRQKKSKTADWYGTESMGSRFQKASPRE  5788

Range 3: 5690 to 5788 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.0 bits(94) 0.0 19/33(58%) 0/33(0%) Plus/Plus
Query       16  CLLESASDRLCPLPVRRFRLLLSPCIRRHQGHV  114
                C LESA  RL P+PV    LLLSPC+  +QG+V
Subject   5690  CFLESAPHRLSPIPVSGL*LLLSPCLGGYQGYV  5788

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: NC_034205.1 Length: 6730 Number of Matches: 3

Range 1: 5676 to 5789 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.2 bits(208) 0.0 38/38(100%) 0/38(0%) Plus/Plus
Query        2  HSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMF  115
                HSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMF
Subject   5676  HSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMF  5789

Range 2: 5678 to 5788 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.8 bits(170) 0.0 32/37(86%) 0/37(0%) Minus/Minus
Query        4  NMTLMSSDAWRQKKSKTADW*GTESIGSRFQKASPRE  114
                N+TL+SS+AWRQKKSKTADW GTES+GSRFQKASPRE
Subject   5678  NITLISSEAWRQKKSKTADWYGTESMGSRFQKASPRE  5788

Range 3: 5690 to 5788 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.0 bits(94) 0.0 19/33(58%) 0/33(0%) Plus/Plus
Query       16  CLLESASDRLCPLPVRRFRLLLSPCIRRHQGHV  114
                C LESA  RL P+PV    LLLSPC+  +QG+V
Subject   5690  CFLESAPHRLSPIPVSGL*LLLSPCLGGYQGYV  5788

Grapevine rupestris vein feathering virus isolate CHASS, complete genome

Sequence ID: KY513702.1 Length: 6716 Number of Matches: 3

Range 1: 5677 to 5790 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
96.4 bits(204) 0.0 37/38(97%) 0/38(0%) Plus/Plus
Query        2  HSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMF  115
                HSLGDAFWNLLPI+SVPYQSAVFDFFCRHASEDIKVMF
Subject   5677  HSLGDAFWNLLPIESVPYQSAVFDFFCRHASEDIKVMF  5790

Range 2: 5676 to 5789 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.0 bits(166) 0.0 34/38(89%) 0/38(0%) Minus/Minus
Query        1  NMTLMSSDAWRQKKSKTADW*GTESIGSRFQKASPRE*  114
                NMTLMSS+AWRQKKSKTAD *GT+S+GSRFQKASPRE*
Subject   5676  NMTLMSSEAWRQKKSKTAD**GTDSMGSRFQKASPRE*  5789

Range 3: 5683 to 5790 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.0 bits(118) 0.0 21/36(58%) 0/36(0%) Minus/Minus
Query        8  EHDLDVF*CMATEEVENGGLVRDRVDRKQIPEGIAK  115
                EHD DV * +ATEE+++ GL+RDR D +QIPEG+ +
Subject   5683  EHDFDVL*SVATEEIKDSGLIRDRFDGEQIPEGVTE  5790

Grapevine rupestris vein feathering virus isolate TRAJ3 BR polyprotein gene, partial cds

Sequence ID: KX828705.1 Length: 6549 Number of Matches: 3

Range 1: 5618 to 5731 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
95.0 bits(201) 0.0 36/38(95%) 0/38(0%) Plus/Plus
Query        2  HSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMF  115
                HSLGD+FWNLLPI+SVPYQSAVFDFFCRHASEDIKVMF
Subject   5618  HSLGDSFWNLLPIESVPYQSAVFDFFCRHASEDIKVMF  5731

Range 2: 5617 to 5730 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.8 bits(133) 0.0 29/38(76%) 0/38(0%) Minus/Minus
Query        1  NMTLMSSDAWRQKKSKTADW*GTESIGSRFQKASPRE*  114
                N+TL+SS+A RQKKSKTAD  GT+SIGS+FQK SPRE*
Subject   5617  NITLISSEA*RQKKSKTAD*YGTDSIGSKFQKESPRE*  5730

Range 3: 5618 to 5731 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.3 bits(99) 0.0 18/38(47%) 0/38(0%) Minus/Minus
Query        2  EHDLDVF*CMATEEVENGGLVRDRVDRKQIPEGIAKGV  115
                EH  D+   + T+EV++ GL+R  +D KQ+PEG+ KGV
Subject   5618  EHHFDILRSVTTKEVKDCGLIRHGLDWKQVPEGVTKGV  5731

Grapevine rupestris vein feathering virus isolate TLF polyprotein gene, partial cds

Sequence ID: KX756274.1 Length: 491 Number of Matches: 3

Range 1: 197 to 310 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
94.1 bits(199) 0.0 35/38(92%) 0/38(0%) Plus/Plus
Query        2  HSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMF  115
                HSLGDAFWNLLPID+VPYQSAVFDFFCRHA ED+KVMF
Subject    197  HSLGDAFWNLLPIDAVPYQSAVFDFFCRHAPEDVKVMF  310

Range 2: 199 to 309 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
74.8 bits(157) 0.0 31/37(84%) 0/37(0%) Minus/Minus
Query        4  NMTLMSSDAWRQKKSKTADW*GTESIGSRFQKASPRE  114
                N+TL SS AWRQKKSKTADW*GT SIG RFQ ASPRE
Subject    199  NITLTSSGAWRQKKSKTADW*GTASIGRRFQNASPRE  309

Range 3: 197 to 310 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.6 bits(104) 0.0 19/38(50%) 0/38(0%) Minus/Minus
Query        2  EHDLDVF*CMATEEVENGGLVRDRVDRKQIPEGIAKGV  115
                EH  ++F  MA +EVE+GGLV  R+DR++IPE + +G+
Subject    197  EHHFNIFGRMAAKEVEDGGLVGHRIDRQEIPERVTEGM  310

Nucleotide Sequence (142 letters)

Query ID:ds2015-149_49
Query definition:No definition line
Query length:122
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 18 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
15
30
45
60
75
90
105
120
135
142

Descriptions

Alignments

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: KY513701.1 Length: 6730 Number of Matches: 4

Range 1: 5649 to 5789 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.8 bits(253) 0.0 47/47(100%) 0/47(0%) Minus/Plus
Query        1  SYATEFSIGHSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMF  141
                SYATEFSIGHSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMF
Subject   5649  SYATEFSIGHSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMF  5789

Range 2: 5648 to 5788 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
97.7 bits(207) 0.0 41/47(87%) 0/47(0%) Plus/Minus
Query        2  NMTLMSSDAWRQKKSKTADW*GTESIGSRFQKASPRE*PMENSVA*E  142
                N+TL+SS+AWRQKKSKTADW GTES+GSRFQKASPRE PMENSVA*E
Subject   5648  NITLISSEAWRQKKSKTADWYGTESMGSRFQKASPREWPMENSVA*E  5788

Range 3: 5651 to 5788 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.4 bits(119) 0.0 26/46(57%) 0/46(0%) Minus/Plus
Query        2  LCH*ILHRSLPWRRLLESASDRLCPLPVRRFRLLLSPCIRRHQGHV  139
                LCH*+LHR L     LESA  RL P+PV    LLLSPC+  +QG+V
Subject   5651  LCH*VLHRPLSR*CFLESAPHRLSPIPVSGL*LLLSPCLGGYQGYV  5788

Range 4: 5649 to 5789 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.1 bits(114) 0.0 26/47(55%) 0/47(0%) Plus/Minus
Query        1  EHDLDVF*CMATEEVENGGLVRDRVDRKQIPEGVAKGVTDGEFSGIR  141
                EH+LD+   MATEEV++  LV D V  +QIPE + + V DGE SGIR
Subject   5649  EHNLDILRGMATEEVKDR*LVWD*VYGEQIPESITERVADGELSGIR  5789

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: NC_034205.1 Length: 6730 Number of Matches: 4

Range 1: 5649 to 5789 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
118.8 bits(253) 0.0 47/47(100%) 0/47(0%) Minus/Plus
Query        1  SYATEFSIGHSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMF  141
                SYATEFSIGHSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMF
Subject   5649  SYATEFSIGHSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMF  5789

Range 2: 5648 to 5788 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
97.7 bits(207) 0.0 41/47(87%) 0/47(0%) Plus/Minus
Query        2  NMTLMSSDAWRQKKSKTADW*GTESIGSRFQKASPRE*PMENSVA*E  142
                N+TL+SS+AWRQKKSKTADW GTES+GSRFQKASPRE PMENSVA*E
Subject   5648  NITLISSEAWRQKKSKTADWYGTESMGSRFQKASPREWPMENSVA*E  5788

Range 3: 5651 to 5788 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.4 bits(119) 0.0 26/46(57%) 0/46(0%) Minus/Plus
Query        2  LCH*ILHRSLPWRRLLESASDRLCPLPVRRFRLLLSPCIRRHQGHV  139
                LCH*+LHR L     LESA  RL P+PV    LLLSPC+  +QG+V
Subject   5651  LCH*VLHRPLSR*CFLESAPHRLSPIPVSGL*LLLSPCLGGYQGYV  5788

Range 4: 5649 to 5789 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.1 bits(114) 0.0 26/47(55%) 0/47(0%) Plus/Minus
Query        1  EHDLDVF*CMATEEVENGGLVRDRVDRKQIPEGVAKGVTDGEFSGIR  141
                EH+LD+   MATEEV++  LV D V  +QIPE + + V DGE SGIR
Subject   5649  EHNLDILRGMATEEVKDR*LVWD*VYGEQIPESITERVADGELSGIR  5789

Grapevine rupestris vein feathering virus isolate CHASS, complete genome

Sequence ID: KY513702.1 Length: 6716 Number of Matches: 4

Range 1: 5650 to 5790 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
117.0 bits(249) 0.0 46/47(98%) 0/47(0%) Minus/Plus
Query        1  SYATEFSIGHSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMF  141
                SYATEFSIGHSLGDAFWNLLPI+SVPYQSAVFDFFCRHASEDIKVMF
Subject   5650  SYATEFSIGHSLGDAFWNLLPIESVPYQSAVFDFFCRHASEDIKVMF  5790

Range 2: 5649 to 5789 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
93.6 bits(198) 0.0 41/47(87%) 0/47(0%) Plus/Minus
Query        2  NMTLMSSDAWRQKKSKTADW*GTESIGSRFQKASPRE*PMENSVA*E  142
                NMTLMSS+AWRQKKSKTAD *GT+S+GSRFQKASPRE*P+ENSVA E
Subject   5649  NMTLMSSEAWRQKKSKTAD**GTDSMGSRFQKASPRE*PIENSVAYE  5789

Range 3: 5650 to 5790 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.2 bits(149) 0.0 29/47(62%) 0/47(0%) Plus/Minus
Query        1  EHDLDVF*CMATEEVENGGLVRDRVDRKQIPEGVAKGVTDGEFSGIR  141
                EHD DV * +ATEE+++ GL+RDR D +QIPEGV + +TD E SGIR
Subject   5650  EHDFDVL*SVATEEIKDSGLIRDRFDGEQIPEGVTERMTD*ELSGIR  5790

Range 4: 5652 to 5789 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.3 bits(123) 0.0 26/46(57%) 0/46(0%) Minus/Plus
Query        2  LCH*ILHRSLPWRRLLESASDRLCPLPVRRFRLLLSPCIRRHQGHV  139
                +CH*+L+RS    RLLESA  R+CPL +R    LLSP  R HQ HV
Subject   5652  VCH*VLNRSFSR*RLLESAPHRICPLSIRCL*FLLSPRFRGHQSHV  5789

Grapevine rupestris vein feathering virus isolate TRAJ3 BR polyprotein gene, partial cds

Sequence ID: KX828705.1 Length: 6549 Number of Matches: 3

Range 1: 5591 to 5731 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
115.6 bits(246) 0.0 45/47(96%) 0/47(0%) Minus/Plus
Query        1  SYATEFSIGHSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMF  141
                SYATEFSIGHSLGD+FWNLLPI+SVPYQSAVFDFFCRHASEDIKVMF
Subject   5591  SYATEFSIGHSLGDSFWNLLPIESVPYQSAVFDFFCRHASEDIKVMF  5731

Range 2: 5590 to 5730 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.8 bits(170) 0.0 37/47(79%) 0/47(0%) Plus/Minus
Query        2  NMTLMSSDAWRQKKSKTADW*GTESIGSRFQKASPRE*PMENSVA*E  142
                N+TL+SS+A RQKKSKTAD  GT+SIGS+FQK SPRE*P+ENSVA*E
Subject   5590  NITLISSEA*RQKKSKTAD*YGTDSIGSKFQKESPRE*PIENSVA*E  5730

Range 3: 5591 to 5731 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.0 bits(129) 0.0 24/47(51%) 0/47(0%) Plus/Minus
Query        1  EHDLDVF*CMATEEVENGGLVRDRVDRKQIPEGVAKGVTDGEFSGIR  141
                EH  D+   + T+EV++ GL+R  +D KQ+PEGV KGVT+ EF G+R
Subject   5591  EHHFDILRSVTTKEVKDCGLIRHGLDWKQVPEGVTKGVTNREFGGVR  5731

Grapevine rupestris vein feathering virus polyprotein gene, complete cds

Sequence ID: AY706994.1 Length: 6617 Number of Matches: 4

Range 1: 5493 to 5633 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.9 bits(240) 0.0 43/47(91%) 0/47(0%) Minus/Plus
Query        1  SYATEFSIGHSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMF  141
                SYATEFSIGHSLGDAFWNLLPID+VP+QSAVFDFFCRHA ED+KVMF
Subject   5493  SYATEFSIGHSLGDAFWNLLPIDAVPFQSAVFDFFCRHAPEDVKVMF  5633

Range 2: 5492 to 5632 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.3 bits(195) 0.0 40/47(85%) 0/47(0%) Plus/Minus
Query        2  NMTLMSSDAWRQKKSKTADW*GTESIGSRFQKASPRE*PMENSVA*E  142
                NMTL SS AWRQKKSKTADW GT S+G RFQKASPRE PMENSVA*E
Subject   5492  NMTLTSSGAWRQKKSKTADWNGTASMGRRFQKASPREWPMENSVA*E  5632

Range 3: 5493 to 5633 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.0 bits(142) 0.0 27/47(57%) 0/47(0%) Plus/Minus
Query        1  EHDLDVF*CMATEEVENGGLVRDRVDRKQIPEGVAKGVTDGEFSGIR  141
                EHD D+   +A EEVE+GGL  D +D ++IP+GVA+GV +GEF GIR
Subject   5493  EHDFDILRRVAAEEVEDGGLEWDSIDGEEIPKGVAEGVANGEFGGIR  5633

Range 4: 5492 to 5632 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
65.7 bits(137) 0.0 30/47(64%) 0/47(0%) Minus/Plus
Query        2  FLCH*ILHRSLPWRRLLESASDRLCPLPVRRFRLLLSPCIRRHQGHV  142
                FLCH ILH  LP RRLLES   R CP+PVRR RLLL P     Q HV
Subject   5492  FLCHRILHWPLPRRRLLESPPHRCCPIPVRRLRLLLPPRA*GCQSHV  5632

Nucleotide Sequence (432 letters)

Query ID:ds2015-149_49
Query definition:No definition line
Query length:122
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 18 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
44
88
132
176
220
264
308
352
396
432

Descriptions

Alignments

Grapevine rupestris vein feathering virus isolate CHASS, complete genome

Sequence ID: KY513702.1 Length: 6716 Number of Matches: 8

Range 1: 3388 to 3789 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
328.2 bits(710) 0.0 133/134(99%) 0/134(0%) Plus/Plus
Query       29  GGGKSYPICQLLKTKPCRNYKIAVPTVELRNEWKDSLKSSPADRWRLGTWESSLLKSARIVVIDEVYKLPRGYLDLAIHADSTAQLFIVLGDPLQGEYHSTNPNSSNARLSSEIKHLQPFMDMYCLWSHRIPRN  430
                G GKSYPICQLLKTKPCRNYKIAVPTVELRNEWKDSLKSSPADRWRLGTWESSLLKSARIVVIDEVYKLPRGYLDLAIHADSTAQLFIVLGDPLQGEYHSTNPNSSNARLSSEIKHLQPFMDMYCLWSHRIPRN
Subject   3388  GCGKSYPICQLLKTKPCRNYKIAVPTVELRNEWKDSLKSSPADRWRLGTWESSLLKSARIVVIDEVYKLPRGYLDLAIHADSTAQLFIVLGDPLQGEYHSTNPNSSNARLSSEIKHLQPFMDMYCLWSHRIPRN  3789

Range 2: 3399 to 3791 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
271.4 bits(586) 0.0 122/131(93%) 0/131(0%) Minus/Minus
Query       40  TLRGMRWDHRQYMSMNGWRCLISLERRALLEFGLVEWYSP*RGSPRTMKSWAVLSA*MARSR*PRGSL*TSSMTTMRADLSREDSQVPSLQRSAGEDLRESFHSLRSSTVGTAIL*LRQGLVFRS*QMG*D  432
                TLRG+RWDHRQYMSM GWRCLISLERRALLE GLVE YSP* GSPRTMKSWAVLSA*MARSR*PRGSL*TSSMTTMRADLSREDSQVPSLQRSAGEDLRESFHSLRSSTVGTAIL*LRQGLVF S Q+G D
Subject   3399  TLRGIRWDHRQYMSMKGWRCLISLERRALLELGLVE*YSP*SGSPRTMKSWAVLSA*MARSR*PRGSL*TSSMTTMRADLSREDSQVPSLQRSAGEDLRESFHSLRSSTVGTAIL*LRQGLVFSSWQIGYD  3791

Range 3: 3386 to 3790 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
182.5 bits(392) 0.0 84/135(62%) 0/135(0%) Minus/Minus
Query       27  RCEECGGTIGSTCP*MVGDA*SRWRDGHCWNLD*WSGTHLEEXXXXXXXXXRCCPHEWLGPGSLEEACRPRQ*RLCEQI*AERTPRFPVSNDQQAKT*GSPSIHCGAQQLGRLSCNCDRAWSSEADRWGKTSRRR  431
                RC    GT GSTCP*  GDA*SRWR GHCW+ D WS THLE G  GR*+AG+CC  EW GPGS   ACR R+*R CE+ *AE+TP+F VS+D++A+T* S SIHCGAQ     SCNC +AWSS A R G T   R
Subject   3386  RCGGSDGTTGSTCP*RAGDA*SRWRGGHCWSWDWWSDTHLEVGHPGR*RAGQCCQREWRGPGSRGGACRLRR*RRCERT*AEKTPKFRVSSDRRART*ESLSIHCGAQPWEPRSCNCGKAWSSAAGRLGTTCHTR  3790

Range 4: 3397 to 3789 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
179.3 bits(385) 0.0 85/131(65%) 0/131(0%) Minus/Minus
Query       38  VARNAVGP*AVHVHEWLEMLDLAGETGIAGIWISGVVLTLKRVAEDDEKLGGAVRMNG*VQVASRKLVDLVNDDYASRFEQRGLPGSQSPTISRRRLEGVLPFIAELNSWDGYLVIATGLGLQKLTDGVRL  430
                VA + +GP AVHVHE LEMLDLAGE GIAG+ I GV+LTLK V +DDE+LG AV +NG VQVA+ +LVD V+DD AS  EQR LP S+SP I  R LE V PFIAELN  +  LVIA  LGLQ+L D VRL
Subject   3397  VAGDPMGPQAVHVHEGLEMLDLAGEAGIAGVGIGGVILTLKWVTQDDEELGSAVSVNGEVQVAAGELVDFVDDDDASGLEQRRLPSSESPAIGGRGLERVFPFIAELNRGNRDLVIAARLGLQQLADWVRL  3789

Range 5: 3381 to 3623 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
104.6 bits(222) 0.0 52/81(64%) 0/81(0%) Plus/Plus
Query       22  LARRREVLPHLSASEDQALSQLQDSRPNC*APQ*MEGLPQVFAC*SLETGNLGVLSAQICSHSRH*RGLQASSRLPGPSHS  264
                L R  +V+P+L A+EDQAL QLQD   + *APQ*ME L QV A  SLET NLGV SAQ+ SH RH R LQA  RLPGP HS
Subject   3381  LRRVWQVVPNLPAAEDQALPQLQDRGSHG*APQ*MERLSQVLARRSLETRNLGVFSAQVRSHRRHRRSLQAPPRLPGPRHS  3623

Range 6: 3671 to 3790 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.8 bits(133) 0.0 28/40(70%) 0/40(0%) Plus/Plus
Query      312  KVSTTPLIQIPAMPVSPARSSISNHSWTCTAYGPTAFLAT  431
                KVS TP I  PAMP SPARSSIS+ SWTCTA GP    AT
Subject   3671  KVSITPPIPTPAMPASPARSSISSPSWTCTACGPIGSPAT  3790

Range 7: 3696 to 3791 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.3 bits(123) 0.0 22/32(69%) 0/32(0%) Plus/Plus
Query      337  KFQQCPSLQRDQASPTIHGHVLPMVPPHSSQR  432
                + QQCP LQRDQASP +HGHVLP+VP    QR
Subject   3696  QLQQCPPLQRDQASPALHGHVLPVVPSDPPQR  3791

Range 8: 3398 to 3550 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.8 bits(109) 0.0 31/51(61%) 0/51(0%) Plus/Plus
Query       39  SLTPSVSF*RPSPVAITR*PSQLLSSAMNGRTPSSLRLLIVGDWEPGSPLC  191
                S T S S *RPS  AITR     LSSAMNG+T SS R  I GD E GS LC
Subject   3398  SRTQSASC*RPSLAAITRSRFPRLSSAMNGKTLSSPRPPIAGDSELGSLLC  3550

Grapevine rupestris vein feathering virus isolate TRAJ3 BR polyprotein gene, partial cds

Sequence ID: KX828705.1 Length: 6549 Number of Matches: 8

Range 1: 3329 to 3730 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
327.3 bits(708) 0.0 132/134(99%) 0/134(0%) Plus/Plus
Query       29  GGGKSYPICQLLKTKPCRNYKIAVPTVELRNEWKDSLKSSPADRWRLGTWESSLLKSARIVVIDEVYKLPRGYLDLAIHADSTAQLFIVLGDPLQGEYHSTNPNSSNARLSSEIKHLQPFMDMYCLWSHRIPRN  430
                G GKSYPICQLLKTKPCRNYKIAVPTVELRNEWKDSLKSSPADRWRLGTWESSLLKSARIVVIDEVYKLPRGYLDLAIHADSTAQLFIVLGDPLQGEYHSTNPNSSNARLSSEIKHLQPFMDMYC+WSHRIPRN
Subject   3329  GCGKSYPICQLLKTKPCRNYKIAVPTVELRNEWKDSLKSSPADRWRLGTWESSLLKSARIVVIDEVYKLPRGYLDLAIHADSTAQLFIVLGDPLQGEYHSTNPNSSNARLSSEIKHLQPFMDMYCMWSHRIPRN  3730

Range 2: 3340 to 3732 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
265.9 bits(574) 0.0 120/131(92%) 0/131(0%) Minus/Minus
Query       40  TLRGMRWDHRQYMSMNGWRCLISLERRALLEFGLVEWYSP*RGSPRTMKSWAVLSA*MARSR*PRGSL*TSSMTTMRADLSREDSQVPSLQRSAGEDLRESFHSLRSSTVGTAIL*LRQGLVFRS*QMG*D  432
                TLRG+RWDH QYMSM G RC ISLE RALLE GLVEWYSP*RGSP TMKSWAVLSA*MARSR*P GSL*TSSMTTMRADLSREDSQVPSLQRSAGEDLRESFHSLRSSTVGTAIL*LRQGLVFRS Q+G*D
Subject   3340  TLRGIRWDHMQYMSMKG*RCFISLESRALLELGLVEWYSP*RGSPSTMKSWAVLSA*MARSR*PLGSL*TSSMTTMRADLSREDSQVPSLQRSAGEDLRESFHSLRSSTVGTAIL*LRQGLVFRSWQIG*D  3732

Range 3: 3329 to 3730 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
183.0 bits(393) 0.0 85/134(63%) 0/134(0%) Minus/Minus
Query       29  VARNAVGP*AVHVHEWLEMLDLAGETGIAGIWISGVVLTLKRVAEDDEKLGGAVRMNG*VQVASRKLVDLVNDDYASRFEQRGLPGSQSPTISRRRLEGVLPFIAELNSWDGYLVIATGLGLQKLTDGVRLPAA  430
                VAR+ VGP AVHVHE L++L  AGE G+AGI ISGVVL LKRVA+ +E+LGGAV MNG +QV   +LVDLV+DD A   EQRGLPG++SP IS R LE VLPFIA+L+  D   V+A GLG Q+L D VRL A+
Subject   3329  VARDPVGPHAVHVHEGLKVLYFAGEPGVAGIRISGVVLALKRVAQHNEELGGAVGMNGQIQVTPGELVDLVDDDNAGGLEQRGLPGAESPAISGRGLERVLPFIAKLHRGDRDFVVAAGLGFQELADRVRLTAS  3730

Range 4: 3333 to 3731 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
172.0 bits(369) 0.0 82/133(62%) 0/133(0%) Minus/Minus
Query       33  RCEECGGTIGSTCP*MVGDA*SRWRDGHCWNLD*WSGTHLEEXXXXXXXXXRCCPHEWLGPGSLEEACRPRQ*RLCEQI*AERTPRFPVSNDQQAKT*GSPSIHCGAQQLGRLSCNCDRAWSSEADRWGKTSR  431
                RCE  GGT  STCP*    A  RWR G CWN D*WSGT LEEGR  +*+ GRCC HEW  PG+   ACRPR+*R C + *AERTPR  VS+DQ+A+T* SPSIHC A   G   C+C RAW S A R GKT R
Subject   3333  RCEGSGGTTCSTCP*RAEGALFRWRAGRCWN*D*WSGTRLEEGRPAQ*RVGRCCRHEWPDPGNPWGACRPRR*RQCGRT*AERTPRCRVSSDQRART*ESPSIHCEAPPWGPRFCSCGRAWFSGAGRSGKTYR  3731

Range 5: 3334 to 3573 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
101.4 bits(215) 0.0 51/80(64%) 0/80(0%) Plus/Plus
Query       34  REVLPHLSASEDQALSQLQDSRPNC*APQ*MEGLPQVFAC*SLETGNLGVLSAQICSHSRH*RGLQASSRLPGPSHSCGQ  273
                R VLP L A E+QAL QLQ+  P+  A Q*MEGL QV A *SLET +LGVLSAQ+  H RH RGLQA   LPG  HSC Q
Subject   3334  R*VLPDLPAPENQALPQLQNRGPHGGASQ*MEGLSQVLAR*SLETRHLGVLSAQVRPHCRHRRGLQAPQGLPGSGHSCRQ  3573

Range 6: 3612 to 3731 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.6 bits(128) 0.0 27/40(68%) 0/40(0%) Plus/Plus
Query      312  KVSTTPLIQIPAMPVSPARSSISNHSWTCTAYGPTAFLAT  431
                K STTPLI IPA P SPA+ S  + SWTCTA GPT  LAT
Subject   3612  KASTTPLILIPATPGSPAK*STFSPSWTCTACGPTGSLAT  3731

Range 7: 3333 to 3491 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.4 bits(132) 0.0 33/53(62%) 0/53(0%) Plus/Plus
Query       33  AGSLTPSVSF*RPSPVAITR*PSQLLSSAMNGRTPSSLRLLIVGDWEPGSPLC  191
                A SLT S S *+PSP A T+  S   S AMNGRT SS R LI GD  PGSPLC
Subject   3333  AVSLTRSASS*KPSPAATTKSRSPRWSFAMNGRTLSSPRPLIAGDSAPGSPLC  3491

Range 8: 3640 to 3732 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 19/31(61%) 0/31(0%) Plus/Plus
Query      340  FQQCPSLQRDQASPTIHGHVLPMVPPHSSQR  432
                FQQ P+LQR++A   +HGHVL +VPP  SQR
Subject   3640  FQQRPALQRNKAPSALHGHVLHVVPPDPSQR  3732

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: KY513701.1 Length: 6730 Number of Matches: 8

Range 1: 3387 to 3788 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
327.3 bits(708) 0.0 132/134(99%) 0/134(0%) Plus/Plus
Query       29  GGGKSYPICQLLKTKPCRNYKIAVPTVELRNEWKDSLKSSPADRWRLGTWESSLLKSARIVVIDEVYKLPRGYLDLAIHADSTAQLFIVLGDPLQGEYHSTNPNSSNARLSSEIKHLQPFMDMYCLWSHRIPRN  430
                G GKSYPICQLLKTKPCRNYKIAVPTVELRNEWKDSLKSSPADRWRLGTWESSLLKSARIVVIDEVYKLPRGYLDLAIHADSTAQLFIVLGDPLQGEYHSTNPNSSNARLSSEIKHLQPFMDMYC+WSHRIPRN
Subject   3387  GCGKSYPICQLLKTKPCRNYKIAVPTVELRNEWKDSLKSSPADRWRLGTWESSLLKSARIVVIDEVYKLPRGYLDLAIHADSTAQLFIVLGDPLQGEYHSTNPNSSNARLSSEIKHLQPFMDMYCMWSHRIPRN  3788

Range 2: 3398 to 3790 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
253.5 bits(547) 0.0 117/131(89%) 0/131(0%) Minus/Minus
Query       40  TLRGMRWDHRQYMSMNGWRCLISLERRALLEFGLVEWYSP*RGSPRTMKSWAVLSA*MARSR*PRGSL*TSSMTTMRADLSREDSQVPSLQRSAGEDLRESFHSLRSSTVGTAIL*LRQGLVFRS*QMG*D  432
                TLRGMR DH QYMSM G RC ISLERRALLE GLVE YSP*RGSPRTMKSWAVLSA MA+SR*PRGSL*TSSMTTMRADLS+EDSQVPSLQRSAGEDLRESFHSLRSSTVGTAIL*LRQG V RS QMG D
Subject   3398  TLRGMRCDHMQYMSMKG*RCFISLERRALLELGLVE*YSP*RGSPRTMKSWAVLSAWMAKSR*PRGSL*TSSMTTMRADLSKEDSQVPSLQRSAGEDLRESFHSLRSSTVGTAIL*LRQGFVLRSWQMGYD  3790

Range 3: 3390 to 3788 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
174.3 bits(374) 0.0 78/133(59%) 0/133(0%) Minus/Minus
Query       32  VARNAVGP*AVHVHEWLEMLDLAGETGIAGIWISGVVLTLKRVAEDDEKLGGAVRMNG*VQVASRKLVDLVNDDYASRFEQRGLPGSQSPTISRRRLEGVLPFIAELNSWDGYLVIATGLGLQKLTDGVRLPA  430
                +A NAV P AVHVHE L++L LAGE  IA + + GV+L LKR+A++DEKLGGAV M+G VQVA+R+LVDLV+DD A   EQRG P ++ P +SR RLEG+ P +AEL+S D  LV+   L L+KL DGV L A
Subject   3390  IAWNAVRPHAVHVHERLKVLYLAGEASIARVGVGGVILALKRIAQNDEKLGGAVSMDGQVQVAARELVDLVDDDNAG*LEQRGFPSAEPPAVSRGRLEGIFPLVAELDSGDSDLVVTARLRLEKLADGV*LAA  3788

Range 4: 3385 to 3786 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
145.9 bits(312) 0.0 73/134(54%) 0/134(0%) Minus/Minus
Query       27  CEECGGTIGSTCP*MVGDA*SRWRDGHCWNLD*WSGTHLEEXXXXXXXXXRCCPHEWLGPGSLEEACRPRQ*RLCEQI*AERTPRFPVSNDQQAKT*GSPSIHCGAQQLGRLSCNCDRAWSSEADRWGKTSRRR  428
                C ECG T  STCP*    A SRWR  HC +   WS T  EE R  R*K GRCC H W  PGS E ACRPR+*R C   *A+R P+   S+ QQ KT*G+ S  CGA+Q G+ SC+  +A S EA RWG T R R
Subject   3385  CVECGATTCSTCP*KAEGALSRWRGEHC*SWGWWSDTRPEEDRPER*KVGRCCQHGWPSPGSREGACRPRR*RQCGLT*AKRIPKCRASSGQQGKT*GNLSTRCGARQWGQRSCSYGKASS*EAGRWGMTCRNR  3786

Range 5: 3380 to 3631 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.9 bits(240) 0.0 50/84(60%) 0/84(0%) Plus/Plus
Query       22  LARRREVLPHLSASEDQALSQLQDSRPNC*APQ*MEGLPQVFAC*SLETGNLGVLSAQICSHSRH*RGLQASSRLPGPSHSCGQ  273
                L R R+V+PHL AS+D+AL  LQD  P+C APQ +E  PQVF C* LE  +LG+L AQ+  H RH RGLQA SRLPG  H C Q
Subject   3380  LRRLRQVIPHLPASQDEALP*LQDRCPHCRAPQRVERFPQVFPC*PLEARHLGILFAQVSPHCRHRRGLQAPSRLPGLGHPC*Q  3631

Range 6: 3704 to 3787 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.1 bits(92) 0.0 17/28(61%) 0/28(0%) Plus/Plus
Query      346  QCPSLQRDQASPTIHGHVLPMVPPHSSQ  429
                QC  LQRD+A    HGHVL +V PHS+Q
Subject   3704  QCSPLQRDKAPSAFHGHVLHVVAPHSTQ  3787

Range 7: 3391 to 3549 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.5 bits(106) 0.0 28/53(53%) 0/53(0%) Plus/Plus
Query       33  AGSLTPSVSF*RPSPVAITR*PSQLLSSAMNGRTPSSLRLLIVGDWEPGSPLC  191
                A S TPS SF R S    TR  S L SSA +G+ PSSL LL  G    G+PLC
Subject   3391  AASHTPSASFSRRSLAVTTRSLSPLSSSATSGKIPSSLPLLTAGGSALGNPLC  3549

Range 8: 3670 to 3786 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.8 bits(85) 0.0 21/39(54%) 0/39(0%) Plus/Plus
Query      312  KVSTTPLIQIPAMPVSPARSSISNHSWTCTAYGPTAFLA  428
                + S TP     AM  SPAR S  + SWTCTA G TAF A
Subject   3670  RASITPPTPTLAMLASPAR*STFSLSWTCTACGRTAFHA  3786

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: NC_034205.1 Length: 6730 Number of Matches: 8

Range 1: 3387 to 3788 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
327.3 bits(708) 0.0 132/134(99%) 0/134(0%) Plus/Plus
Query       29  GGGKSYPICQLLKTKPCRNYKIAVPTVELRNEWKDSLKSSPADRWRLGTWESSLLKSARIVVIDEVYKLPRGYLDLAIHADSTAQLFIVLGDPLQGEYHSTNPNSSNARLSSEIKHLQPFMDMYCLWSHRIPRN  430
                G GKSYPICQLLKTKPCRNYKIAVPTVELRNEWKDSLKSSPADRWRLGTWESSLLKSARIVVIDEVYKLPRGYLDLAIHADSTAQLFIVLGDPLQGEYHSTNPNSSNARLSSEIKHLQPFMDMYC+WSHRIPRN
Subject   3387  GCGKSYPICQLLKTKPCRNYKIAVPTVELRNEWKDSLKSSPADRWRLGTWESSLLKSARIVVIDEVYKLPRGYLDLAIHADSTAQLFIVLGDPLQGEYHSTNPNSSNARLSSEIKHLQPFMDMYCMWSHRIPRN  3788

Range 2: 3398 to 3790 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
253.5 bits(547) 0.0 117/131(89%) 0/131(0%) Minus/Minus
Query       40  TLRGMRWDHRQYMSMNGWRCLISLERRALLEFGLVEWYSP*RGSPRTMKSWAVLSA*MARSR*PRGSL*TSSMTTMRADLSREDSQVPSLQRSAGEDLRESFHSLRSSTVGTAIL*LRQGLVFRS*QMG*D  432
                TLRGMR DH QYMSM G RC ISLERRALLE GLVE YSP*RGSPRTMKSWAVLSA MA+SR*PRGSL*TSSMTTMRADLS+EDSQVPSLQRSAGEDLRESFHSLRSSTVGTAIL*LRQG V RS QMG D
Subject   3398  TLRGMRCDHMQYMSMKG*RCFISLERRALLELGLVE*YSP*RGSPRTMKSWAVLSAWMAKSR*PRGSL*TSSMTTMRADLSKEDSQVPSLQRSAGEDLRESFHSLRSSTVGTAIL*LRQGFVLRSWQMGYD  3790

Range 3: 3390 to 3788 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
174.3 bits(374) 0.0 78/133(59%) 0/133(0%) Minus/Minus
Query       32  VARNAVGP*AVHVHEWLEMLDLAGETGIAGIWISGVVLTLKRVAEDDEKLGGAVRMNG*VQVASRKLVDLVNDDYASRFEQRGLPGSQSPTISRRRLEGVLPFIAELNSWDGYLVIATGLGLQKLTDGVRLPA  430
                +A NAV P AVHVHE L++L LAGE  IA + + GV+L LKR+A++DEKLGGAV M+G VQVA+R+LVDLV+DD A   EQRG P ++ P +SR RLEG+ P +AEL+S D  LV+   L L+KL DGV L A
Subject   3390  IAWNAVRPHAVHVHERLKVLYLAGEASIARVGVGGVILALKRIAQNDEKLGGAVSMDGQVQVAARELVDLVDDDNAG*LEQRGFPSAEPPAVSRGRLEGIFPLVAELDSGDSDLVVTARLRLEKLADGV*LAA  3788

Range 4: 3385 to 3786 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
145.9 bits(312) 0.0 73/134(54%) 0/134(0%) Minus/Minus
Query       27  CEECGGTIGSTCP*MVGDA*SRWRDGHCWNLD*WSGTHLEEXXXXXXXXXRCCPHEWLGPGSLEEACRPRQ*RLCEQI*AERTPRFPVSNDQQAKT*GSPSIHCGAQQLGRLSCNCDRAWSSEADRWGKTSRRR  428
                C ECG T  STCP*    A SRWR  HC +   WS T  EE R  R*K GRCC H W  PGS E ACRPR+*R C   *A+R P+   S+ QQ KT*G+ S  CGA+Q G+ SC+  +A S EA RWG T R R
Subject   3385  CVECGATTCSTCP*KAEGALSRWRGEHC*SWGWWSDTRPEEDRPER*KVGRCCQHGWPSPGSREGACRPRR*RQCGLT*AKRIPKCRASSGQQGKT*GNLSTRCGARQWGQRSCSYGKASS*EAGRWGMTCRNR  3786

Range 5: 3380 to 3631 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
112.9 bits(240) 0.0 50/84(60%) 0/84(0%) Plus/Plus
Query       22  LARRREVLPHLSASEDQALSQLQDSRPNC*APQ*MEGLPQVFAC*SLETGNLGVLSAQICSHSRH*RGLQASSRLPGPSHSCGQ  273
                L R R+V+PHL AS+D+AL  LQD  P+C APQ +E  PQVF C* LE  +LG+L AQ+  H RH RGLQA SRLPG  H C Q
Subject   3380  LRRLRQVIPHLPASQDEALP*LQDRCPHCRAPQRVERFPQVFPC*PLEARHLGILFAQVSPHCRHRRGLQAPSRLPGLGHPC*Q  3631

Range 6: 3704 to 3787 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.1 bits(92) 0.0 17/28(61%) 0/28(0%) Plus/Plus
Query      346  QCPSLQRDQASPTIHGHVLPMVPPHSSQ  429
                QC  LQRD+A    HGHVL +V PHS+Q
Subject   3704  QCSPLQRDKAPSAFHGHVLHVVAPHSTQ  3787

Range 7: 3391 to 3549 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
51.5 bits(106) 0.0 28/53(53%) 0/53(0%) Plus/Plus
Query       33  AGSLTPSVSF*RPSPVAITR*PSQLLSSAMNGRTPSSLRLLIVGDWEPGSPLC  191
                A S TPS SF R S    TR  S L SSA +G+ PSSL LL  G    G+PLC
Subject   3391  AASHTPSASFSRRSLAVTTRSLSPLSSSATSGKIPSSLPLLTAGGSALGNPLC  3549

Range 8: 3670 to 3786 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.8 bits(85) 0.0 21/39(54%) 0/39(0%) Plus/Plus
Query      312  KVSTTPLIQIPAMPVSPARSSISNHSWTCTAYGPTAFLA  428
                + S TP     AM  SPAR S  + SWTCTA G TAF A
Subject   3670  RASITPPTPTLAMLASPAR*STFSLSWTCTACGRTAFHA  3786

Grapevine rupestris vein feathering virus polyprotein gene, complete cds

Sequence ID: AY706994.1 Length: 6617 Number of Matches: 9

Range 1: 3381 to 3782 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
323.6 bits(700) 0.0 130/134(97%) 0/134(0%) Plus/Plus
Query       29  GGGKSYPICQLLKTKPCRNYKIAVPTVELRNEWKDSLKSSPADRWRLGTWESSLLKSARIVVIDEVYKLPRGYLDLAIHADSTAQLFIVLGDPLQGEYHSTNPNSSNARLSSEIKHLQPFMDMYCLWSHRIPRN  430
                G GKS+PICQLLKTKPCRNYKIAVPTVELRNEWKDSLKSSPADRWRLGTWESSLLKSARIVVIDEVYKLPRGYLDLAIHADSTAQLFIVLGDPLQGEYHSTNPNSSNARL+SEIKHLQP+MDMYCLWSHRIPRN
Subject   3381  GCGKSFPICQLLKTKPCRNYKIAVPTVELRNEWKDSLKSSPADRWRLGTWESSLLKSARIVVIDEVYKLPRGYLDLAIHADSTAQLFIVLGDPLQGEYHSTNPNSSNARLASEIKHLQPYMDMYCLWSHRIPRN  3782

Range 2: 3389 to 3784 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
253.5 bits(547) 0.0 114/132(86%) 0/132(0%) Minus/Minus
Query       37  TLRGMRWDHRQYMSMNGWRCLISLERRALLEFGLVEWYSP*RGSPRTMKSWAVLSA*MARSR*PRGSL*TSSMTTMRADLSREDSQVPSLQRSAGEDLRESFHSLRSSTVGTAIL*LRQGLVFRS*QMG*DF  432
                TLRGMRWDH+QYMSM GWRCLISL RRALLE GLVEWYSP RGSPRTMKS AV SA MA+SR*P GSL*TSS+TT+RAD  REDSQVPSLQRSAGEDLRESFHSLRSSTVGTAIL*LRQG V RS QMG DF
Subject   3389  TLRGMRWDHKQYMSM*GWRCLISLARRALLELGLVEWYSPWRGSPRTMKSCAVESAWMAKSR*PLGSL*TSSITTIRADFRREDSQVPSLQRSAGEDLRESFHSLRSSTVGTAIL*LRQGFVLRSWQMGKDF  3784

Range 3: 3381 to 3782 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
171.1 bits(367) 0.0 79/134(59%) 0/134(0%) Minus/Minus
Query       29  VARNAVGP*AVHVHEWLEMLDLAGETGIAGIWISGVVLTLKRVAEDDEKLGGAVRMNG*VQVASRKLVDLVNDDYASRFEQRGLPGSQSPTISRRRLEGVLPFIAELNSWDGYLVIATGLGLQKLTDGVRLPAA  430
                VA +AVGP AVHVH  LEMLDLA +T +AG+ +SGVVLTL+RVAED+EKL G V M+G*+++ SRKLVD +++D  SR ++  LPGS+SP ISR   E V P IAE N     LV+A GL L+KL DG R  AA
Subject   3381  VAGDAVGPQAVHVHVGLEMLDLASQTSVAGVGVSGVVLTLERVAEDNEKLRG*VSMDG*IKITSRKLVDFIDNDDPSRLQEGRLPGSESPAISRGGFERVFPLIAEFNCGHRDLVVAAGLCLKKLADGERFSAA  3782

Range 4: 3379 to 3618 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.3 bits(193) 0.0 42/80(52%) 0/80(0%) Minus/Minus
Query       27  HEWLGPGSLEEACRPRQ*RLCEQI*AERTPRFPVSNDQQAKT*GSPSIHCGAQQLGRLSCNCDRAWSSEADRWGKTSRRR  266
                H WL   +L EACR  +*R  EQ    +TPRF VS+DQQ + * S S HCG Q     SC+C RA S EA RWGK  R R
Subject   3379  HGWLNQDNLSEACRLHR*RRSEQTSGGKTPRFRVSSDQQGRI*ESLSTHCGVQLWAPRSCSCGRALS*EAGRWGKIFRSR  3618

Range 5: 3658 to 3783 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
66.6 bits(139) 0.0 27/42(64%) 0/42(0%) Minus/Minus
Query      306  RCEECGGTIGSTCP*MVGDA*SRWRDGHCWNLD*WSGTHLEE  431
                RC  CGGT  STCP   GDA*SR  D  CW+  *WSGTHL E
Subject   3658  RCGGCGGTTSSTCPCRAGDA*SR*PDERCWSWG*WSGTHLGE  3783

Range 6: 3380 to 3619 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
89.0 bits(188) 0.0 43/80(54%) 0/80(0%) Plus/Plus
Query       28  RRREVLPHLSASEDQALSQLQDSRPNC*APQ*MEGLPQVFAC*SLETGNLGVLSAQICSHSRH*RGLQASSRLPGPSHSC  267
                R R++ PHL AS D+AL QLQD   + * PQ*+E L Q+  C*SLET NLGV   ++CS  R+   LQAS RL   SH C
Subject   3380  RLRKIFPHLPAS*DKALPQLQDRGAHS*TPQ*VERLSQILPC*SLETRNLGVFPPEVCSDRRYR*SLQASERLS*FSHPC  3619

Range 7: 3664 to 3783 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.4 bits(119) 0.0 27/40(68%) 0/40(0%) Plus/Plus
Query      312  KVSTTPLIQIPAMPVSPARSSISNHSWTCTAYGPTAFLAT  431
                KVSTTPL   PA  V  ARSSIS+ +WTCTA GPTA  AT
Subject   3664  KVSTTPLTPTPATLVWLARSSISSPTWTCTACGPTASPAT  3783

Range 8: 3382 to 3534 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.4 bits(119) 0.0 29/51(57%) 0/51(0%) Plus/Plus
Query       30  AAGSLTPSVSF*RPSPVAITR*PSQLLSSAMNGRTPSSLRLLIVGDWEPGS  182
                AA +L+PS SF R SP A TR     L+SAM+G+T S+  LLI GD EPGS
Subject   3382  AAENLSPSASFLRQSPAATTRSRCPQLNSAMSGKTLSNPPLLIAGDSEPGS  3534

Range 9: 3689 to 3784 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.8 bits(98) 0.0 20/32(62%) 0/32(0%) Plus/Plus
Query      337  KFQQCPSLQRDQASPTIHGHVLPMVPPHSSQR  432
                + QQ  S  RDQASP +HGHVL +VPPH  QR
Subject   3689  QLQQRSSG*RDQASPALHGHVLLVVPPHPPQR  3784

Nucleotide Sequence (110 letters)

Query ID:ds2015-149_49
Query definition:No definition line
Query length:122
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 18 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
110

Descriptions

Alignments

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: KY513701.1 Length: 6730 Number of Matches: 3

Range 1: 5691 to 5798 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.3 bits(195) 0.0 36/36(100%) 0/36(0%) Minus/Plus
Query        3  AFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMFKLG  110
                AFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMFKLG
Subject   5691  AFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMFKLG  5798

Range 2: 5693 to 5800 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
77.1 bits(162) 0.0 30/36(83%) 0/36(0%) Plus/Minus
Query        1  RPNLNMTLMSSDAWRQKKSKTADW*GTESIGSRFQK  108
                RP+LN+TL+SS+AWRQKKSKTADW GTES+GSRFQK
Subject   5693  RPSLNITLISSEAWRQKKSKTADWYGTESMGSRFQK  5800

Range 3: 5696 to 5800 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 21/35(60%) 0/35(0%) Minus/Plus
Query        1  LESASDRLCPLPVRRFRLLLSPCIRRHQGHVQVGS  105
                LESA  RL P+PV    LLLSPC+  +QG+VQ GS
Subject   5696  LESAPHRLSPIPVSGL*LLLSPCLGGYQGYVQAGS  5800

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: NC_034205.1 Length: 6730 Number of Matches: 3

Range 1: 5691 to 5798 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.3 bits(195) 0.0 36/36(100%) 0/36(0%) Minus/Plus
Query        3  AFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMFKLG  110
                AFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMFKLG
Subject   5691  AFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMFKLG  5798

Range 2: 5693 to 5800 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
77.1 bits(162) 0.0 30/36(83%) 0/36(0%) Plus/Minus
Query        1  RPNLNMTLMSSDAWRQKKSKTADW*GTESIGSRFQK  108
                RP+LN+TL+SS+AWRQKKSKTADW GTES+GSRFQK
Subject   5693  RPSLNITLISSEAWRQKKSKTADWYGTESMGSRFQK  5800

Range 3: 5696 to 5800 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 21/35(60%) 0/35(0%) Minus/Plus
Query        1  LESASDRLCPLPVRRFRLLLSPCIRRHQGHVQVGS  105
                LESA  RL P+PV    LLLSPC+  +QG+VQ GS
Subject   5696  LESAPHRLSPIPVSGL*LLLSPCLGGYQGYVQAGS  5800

Grapevine rupestris vein feathering virus isolate CHASS, complete genome

Sequence ID: KY513702.1 Length: 6716 Number of Matches: 4

Range 1: 5692 to 5799 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.4 bits(191) 0.0 35/36(97%) 0/36(0%) Minus/Plus
Query        3  AFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMFKLG  110
                AFWNLLPI+SVPYQSAVFDFFCRHASEDIKVMFKLG
Subject   5692  AFWNLLPIESVPYQSAVFDFFCRHASEDIKVMFKLG  5799

Range 2: 5694 to 5801 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
74.8 bits(157) 0.0 31/36(86%) 0/36(0%) Plus/Minus
Query        1  RPNLNMTLMSSDAWRQKKSKTADW*GTESIGSRFQK  108
                RP+LNMTLMSS+AWRQKKSKTAD *GT+S+GSRFQK
Subject   5694  RPSLNMTLMSSEAWRQKKSKTAD**GTDSMGSRFQK  5801

Range 3: 5692 to 5799 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.7 bits(124) 0.0 23/36(64%) 0/36(0%) Plus/Minus
Query        3  TQLEHDLDVF*CMATEEVENGGLVRDRVDRKQIPEG  110
                T+LEHD DV * +ATEE+++ GL+RDR D +QIPEG
Subject   5692  TKLEHDFDVL*SVATEEIKDSGLIRDRFDGEQIPEG  5799

Range 4: 5694 to 5801 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.3 bits(97) 0.0 21/36(58%) 0/36(0%) Minus/Plus
Query        1  LLESASDRLCPLPVRRFRLLLSPCIRRHQGHVQVGS  108
                LLESA  R+CPL +R    LLSP  R HQ HVQ  S
Subject   5694  LLESAPHRICPLSIRCL*FLLSPRFRGHQSHVQAWS  5801

Grapevine rupestris vein feathering virus isolate TRAJ3 BR polyprotein gene, partial cds

Sequence ID: KX828705.1 Length: 6549 Number of Matches: 2

Range 1: 5633 to 5740 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
89.0 bits(188) 0.0 34/36(94%) 0/36(0%) Minus/Plus
Query        3  AFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMFKLG  110
                +FWNLLPI+SVPYQSAVFDFFCRHASEDIKVMFKLG
Subject   5633  SFWNLLPIESVPYQSAVFDFFCRHASEDIKVMFKLG  5740

Range 2: 5635 to 5742 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.0 bits(129) 0.0 27/36(75%) 0/36(0%) Plus/Minus
Query        1  RPNLNMTLMSSDAWRQKKSKTADW*GTESIGSRFQK  108
                RP+LN+TL+SS+A RQKKSKTAD  GT+SIGS+FQK
Subject   5635  RPSLNITLISSEA*RQKKSKTAD*YGTDSIGSKFQK  5742

Grapevine rupestris vein feathering virus isolate TLF polyprotein gene, partial cds

Sequence ID: KX756274.1 Length: 491 Number of Matches: 3

Range 1: 212 to 319 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
88.1 bits(186) 0.0 33/36(92%) 0/36(0%) Minus/Plus
Query        3  AFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMFKLG  110
                AFWNLLPID+VPYQSAVFDFFCRHA ED+KVMFKLG
Subject    212  AFWNLLPIDAVPYQSAVFDFFCRHAPEDVKVMFKLG  319

Range 2: 217 to 321 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.2 bits(149) 0.0 29/35(83%) 0/35(0%) Plus/Minus
Query        1  RPNLNMTLMSSDAWRQKKSKTADW*GTESIGSRFQ  105
                RP+LN+TL SS AWRQKKSKTADW*GT SIG RFQ
Subject    217  RPSLNITLTSSGAWRQKKSKTADW*GTASIGRRFQ  321

Range 3: 215 to 316 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 19/34(56%) 0/34(0%) Plus/Minus
Query        6  QLEHDLDVF*CMATEEVENGGLVRDRVDRKQIPE  107
                +LEH  ++F  MA +EVE+GGLV  R+DR++IPE
Subject    215  KLEHHFNIFGRMAAKEVEDGGLVGHRIDRQEIPE  316

Nucleotide Sequence (410 letters)

Query ID:ds2015-149_49
Query definition:No definition line
Query length:122
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 18 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
41
82
123
164
205
246
287
328
369
410

Descriptions

Alignments

Grapevine rupestris vein feathering virus isolate TRAJ3 BR polyprotein gene, partial cds

Sequence ID: KX828705.1 Length: 6549 Number of Matches: 9

Range 1: 5486 to 5884 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
298.9 bits(646) 0.0 124/133(93%) 0/133(0%) Plus/Plus
Query       10  CVGCVWLPGCIRSPIALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPIEAVPYQSAVFDFFCRHASEDIKVMFKLGRVEISLFSHLLHKLSWLSYSTYSMLNSLQRRALRGKAVRQHFPGDSKE  408
                C   V   GCIRSP+ALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGD+FWNLLPIE+VPYQSAVFDFFCRHASEDIKVMFKLGRVEISLFSHLLHKLSWLSYSTYSMLNSLQRRALRGKAVRQHFPGDSKE
Subject   5486  CGYYVGCEGCIRSPVALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDSFWNLLPIESVPYQSAVFDFFCRHASEDIKVMFKLGRVEISLFSHLLHKLSWLSYSTYSMLNSLQRRALRGKAVRQHFPGDSKE  5884

Range 2: 5497 to 5886 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
227.0 bits(489) 0.0 106/130(82%) 0/130(0%) Minus/Minus
Query       21  TSLESPGKCWRTAFPRRALRWRELSIE*VE*DNQDSL*SKWEKREISTLPSLNMTLMSSEAWRQKKSKTAD**GTASMGSRFQKASPRE*PIENSVA*ERSFSSMVPSSTHTMSLAKSAMGERIQPGNQT  410
                TSLESPGKCWRTA PR A R RELS+E*VE*D+Q+SL*S+ EKREIST PSLN+TL+SSEA RQKKSKTAD* GT S+GS+FQK SPRE*PIENSVA*ERSFSSMVPSST TMSLAKSA GER+QP   T
Subject   5497  TSLESPGKCWRTALPRSARRCRELSME*VE*DSQESL*SR*EKREISTRPSLNITLISSEA*RQKKSKTAD*YGTDSIGSKFQKESPRE*PIENSVA*ERSFSSMVPSSTQTMSLAKSATGERMQPSQPT  5886

Range 3: 5498 to 5881 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
167.4 bits(359) 0.0 70/128(55%) 0/128(0%) Minus/Minus
Query       22  FGVTGKVLANSLSTESSALERIEHRVGGVRQPGQLVKQVGEERDFDSAQFEHDLDVF*SMATEEVEDSRLIGDSFDGEQVPEGVTEGVTD*ELSGIGEKLLINGSVVNAHHELGEKCNGGADTAWQPN  405
                FGVTGK+LA+S ++E + L+RIEH V GVRQPG+LVKQ+ EERD D+A+ EH  D+  S+ T+EV+D  LI    D +QVPEGVT+GVT+ E  G+ E+LLING++V+ +HELG+K + G + A   N
Subject   5498  FGVTGKMLADSFASERATLQRIEHGVSGVRQPGELVKQMREERDLDAAELEHHFDILRSVTTKEVKDCGLIRHGLDWKQVPEGVTKGVTNREFGGVREELLINGAIVHTNHELGKKRDWGTNAALAAN  5881

Range 4: 5697 to 5885 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
81.7 bits(172) 0.0 37/63(59%) 0/63(0%) Plus/Plus
Query      221  VAMLQKTSRSCSNWAESKSLSSPTCFTSCPGCLTPPTRCSILSSAELSVERLFANTFPVTPKK  409
                V  L + S+ CS+ A S+SLSS  CFTS PGCLTP T CSIL S   S  +L AN FPVTPK+
Subject   5697  VVTLLRISK*CSSSAASRSLSSLICFTSSPGCLTPLTPCSILCSVARSEAKLSANIFPVTPKR  5885

Range 5: 5508 to 5600 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
33.1 bits(66) 0.0 15/31(48%) 0/31(0%) Plus/Plus
Query       32  QAVSAPPLHFSPSSWCALTTEPLMRSFSPMP  124
                +A   P   F PSSW   T  PLMRS S  P
Subject   5508  RAAFVPQSRFLPSSWFVWTMAPLMRSSSLTP  5600

Range 6: 5670 to 5882 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.5 bits(152) 0.0 39/71(55%) 0/71(0%) Minus/Minus
Query      194  LWSHRESVGEQPFHGELCAGEN*ASSRWSKTTRTACEASGRRERFRLCPV*T*P*CLLKHGDRRSRRQPTD  406
                LWSHRE+VG Q   G   A EN*A S+WSKT R ACEA  RRER R    *T  *   K  D+RS+R   D
Subject   5670  LWSHRENVGGQLCLGARDAAEN*AWSKWSKTARRACEADERRERSRRGRA*TSL*YPQKRDDKRSQRLRID  5882

Range 7: 5520 to 5603 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
41.8 bits(85) 0.0 14/28(50%) 0/28(0%) Minus/Minus
Query       44  QWHRREASHQWFRRQRTP*AWRKVQWGS  127
                +W +R ASHQW  R   P*AW+K + G+
Subject   5520  RWRKRGASHQWCHRPHKP*AWQKARLGN  5603

Range 8: 5512 to 5751 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.0 bits(118) 0.0 37/80(46%) 0/80(0%) Plus/Plus
Query       36  LYPLPHCTFRQAHGVR*RRNH**EASLLCH*VLNRSLPR*RLLEPAPHRSCPLSVGCLRLLLSPCFRRHQGHVQTGQSRN  275
                L+  P   F QAHG+  R +H**EA LL H +L  SLP * LLE A +R   +S+  L LLLS  F  +Q  VQ    R+
Subject   5512  LHSFPSRAFCQAHGLCGRWHH**EAPLLRHRILYWSLPW*LLLELASNRVRAVSIRSL*LLLSSRF*GYQSDVQARPRRD  5751

Range 9: 5812 to 5883 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
35.4 bits(71) 0.0 15/24(62%) 0/24(0%) Plus/Plus
Query      336  AQFSPAQSSPWKGCSPTLSR*LQR  407
                AQFS A  +P + C PT SR*LQR
Subject   5812  AQFSAASRAPRQSCPPTFSR*LQR  5883

Grapevine rupestris vein feathering virus isolate CHASS, complete genome

Sequence ID: KY513702.1 Length: 6716 Number of Matches: 9

Range 1: 5545 to 5943 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
298.4 bits(645) 0.0 123/133(92%) 0/133(0%) Plus/Plus
Query       10  CVGCVWLPGCIRSPIALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPIEAVPYQSAVFDFFCRHASEDIKVMFKLGRVEISLFSHLLHKLSWLSYSTYSMLNSLQRRALRGKAVRQHFPGDSKE  408
                C   V   GCIRSP+ALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPIE+VPYQSAVFDFFCRHASEDIKVMFKLGRVE+SLFSHLLH+LSWLSYSTYSMLNSLQRRALRGKAVRQHFPGDSKE
Subject   5545  CGYYVGCEGCIRSPVALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPIESVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHRLSWLSYSTYSMLNSLQRRALRGKAVRQHFPGDSKE  5943

Range 2: 5556 to 5945 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
241.6 bits(521) 0.0 110/130(85%) 0/130(0%) Minus/Minus
Query       21  TSLESPGKCWRTAFPRRALRWRELSIE*VE*DNQDSL*SKWEKREISTLPSLNMTLMSSEAWRQKKSKTAD**GTASMGSRFQKASPRE*PIENSVA*ERSFSSMVPSSTHTMSLAKSAMGERIQPGNQT  410
                TSLESPGKCWRTA PRRA RWRELS+E*VE ++Q+SL*SK EKRE ST PSLNMTLMSSEAWRQKKSKTAD**GT SMGSRFQKASPRE*PIENSVA E SFSSMVPSST TMSLA SA GER+QP   T
Subject   5556  TSLESPGKCWRTALPRRARRWRELSME*VEYESQESL*SK*EKRETSTRPSLNMTLMSSEAWRQKKSKTAD**GTDSMGSRFQKASPRE*PIENSVAYESSFSSMVPSSTQTMSLANSATGERMQPSQPT  5945

Range 3: 5575 to 5940 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
183.0 bits(393) 0.0 78/122(64%) 0/122(0%) Minus/Minus
Query       40  FGVTGKVLANSLSTESSALERIEHRVGGVRQPGQLVKQVGEERDFDSAQFEHDLDVF*SMATEEVEDSRLIGDSFDGEQVPEGVTEGVTD*ELSGIGEKLLINGSVVNAHHELGEKCNGGAD  405
                FGVT KVLAN  + E S LER+EH V GV +PG+ VKQV EE DFD+ + EHD DV *S+ATEE++DS LI D FDGEQ+PEGVTE +TD*ELSGI E+LL++G+VV+  HE GE+ +GGA+
Subject   5575  FGVTRKVLANGFAAEGSTLERVEHGVSGV*EPGEPVKQVREEGDFDATKLEHDFDVL*SVATEEIKDSGLIRDRFDGEQIPEGVTERMTD*ELSGIREQLLVDGAVVHTDHEFGEQRDGGAN  5940

Range 4: 5571 to 5810 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
109.7 bits(233) 0.0 49/80(61%) 0/80(0%) Plus/Plus
Query       36  LYPLPHCTFRQAHGVR*RRNH**EASLLCH*VLNRSLPR*RLLEPAPHRSCPLSVGCLRLLLSPCFRRHQGHVQTGQSRN  275
                L+ LP    RQ HG+  RR+H  EA+L+CH*VLNRS  R*RLLE APHR CPLS+ CL  LLSP FR HQ HVQ    R+
Subject   5571  LHSLPRRAVRQTHGLCGRRHHRREAALVCH*VLNRSFSR*RLLESAPHRICPLSIRCL*FLLSPRFRGHQSHVQAWSRRS  5810

Range 5: 5871 to 5942 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
30.4 bits(60) 0.0 15/24(62%) 0/24(0%) Plus/Plus
Query      336  AQFSPAQSSPWKGCSPTLSR*LQR  407
                AQ SPA S P +  SP LS *LQR
Subject   5871  AQLSPASSPPRQSRSPALSW*LQR  5942

Range 6: 5717 to 5941 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
93.6 bits(198) 0.0 44/75(59%) 0/75(0%) Minus/Minus
Query      182  LWSHRESVGEQPFHGELCAGEN*ASSRWSKTTRTACEASGRRERFRLCPV*T*P*CLLKHGDRRSRRQPTDRGQL  406
                LWSH+ES GE+   G L AGE+*A S+WS   R ACEAS RR R R    *T* *C LK GDRR++RQ  D+GQ+
Subject   5717  LWSHQESAGERLCRGGLDAGES*AWSKWSMRARRACEASERRGRLRRDQA*T*L*CPLKRGDRRNQRQRIDKGQI  5941

Range 7: 5579 to 5665 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
43.7 bits(89) 0.0 16/29(55%) 0/29(0%) Minus/Minus
Query       44  TQWHRREASHQWFRRQRTP*AWRKVQWGS  130
                TQWH R AS +W RR   P* WR  + GS
Subject   5579  TQWHTRAASRRWCRRPHRP*VWRTARRGS  5665

Range 8: 5756 to 5944 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.6 bits(174) 0.0 38/63(60%) 0/63(0%) Plus/Plus
Query      221  VAMLQKTSRSCSNWAESKSLSSPTCFTSCPGCLTPPTRCSILSSAELSVERLFANTFPVTPKK  409
                VA LQ+TS+SCS+   SKS SS TCFT  PG  TP T CS LSS E S  + FA+TF VTPK+
Subject   5756  VATLQRTSKSCSSLVASKSPSSLTCFTGSPGSHTPLTPCSTLSSVEPSAAKPFASTFLVTPKR  5944

Range 9: 5579 to 5662 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.7 bits(76) 0.0 16/28(57%) 0/28(0%) Plus/Plus
Query       44  APPLHFSPSSWCALTTEPLMRSFSPMPL  127
                APP   SP+SW   TT P  RS S MPL
Subject   5579  APPSRCSPNSWSVWTTAPSTRSCSRMPL  5662

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: KY513701.1 Length: 6730 Number of Matches: 8

Range 1: 5544 to 5942 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
297.1 bits(642) 0.0 122/133(92%) 0/133(0%) Plus/Plus
Query       10  CVGCVWLPGCIRSPIALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPIEAVPYQSAVFDFFCRHASEDIKVMFKLGRVEISLFSHLLHKLSWLSYSTYSMLNSLQRRALRGKAVRQHFPGDSKE  408
                C   V   GCIRSP+ALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPI++VPYQSAVFDFFCRHASEDIKVMFKLGRVE+SLFSHLLHKLSWLSYSTYSMLNSLQRRAL+GKAVRQHFPGDSKE
Subject   5544  CGYYVGCEGCIRSPVALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSLQRRALKGKAVRQHFPGDSKE  5942

Range 2: 5555 to 5944 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
221.9 bits(478) 0.0 99/130(76%) 0/130(0%) Minus/Minus
Query       21  TSLESPGKCWRTAFPRRALRWRELSIE*VE*DNQDSL*SKWEKREISTLPSLNMTLMSSEAWRQKKSKTAD**GTASMGSRFQKASPRE*PIENSVA*ERSFSSMVPSSTHTMSLAKSAMGERIQPGNQT  410
                TSLESPGKCWRTA P  A R RELS+E*VE ++Q+SL*S+WEK E ST PSLN+TL+SSEAWRQKKSKTAD  GT SMGSRFQKASPRE P+ENSVA*E SFSS+VPSSTHT+SLAK A G+R+QP   T
Subject   5555  TSLESPGKCWRTALPLSARRCRELSME*VEYESQESL*SRWEKSETSTRPSLNITLISSEAWRQKKSKTADWYGTESMGSRFQKASPREWPMENSVA*ESSFSSIVPSSTHTISLAKRATGDRMQPSQPT  5944

Range 3: 5568 to 5936 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
159.1 bits(341) 0.0 68/123(55%) 0/123(0%) Minus/Minus
Query       34  GVTGKVLANSLSTESSALERIEHRVGGVRQPGQLVKQVGEERDFDSAQFEHDLDVF*SMATEEVEDSRLIGDSFDGEQVPEGVTEGVTD*ELSGIGEKLLINGSVVNAHHELGEKCNGGADTA  402
                G+T ++LANSL+ E + L+ +EH VGGV +PG+LVKQVGE+ DFD+ Q EH+LD+   MATEEV+D  L+ D   GEQ+PE +TE V D ELSGI E+LLIN ++VNA+H+LG++ +   D A
Subject   5568  GITREMLANSLAFERTTLQGVEHGVGGV*EPGELVKQVGEK*DFDTTQLEHNLDILRGMATEEVKDR*LVWD*VYGEQIPESITERVADGELSGIREQLLINSAIVNAYHQLGKESDRRPDAA  5936

Range 4: 5570 to 5809 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.0 bits(190) 0.0 44/80(55%) 0/80(0%) Plus/Plus
Query       36  LYPLPHCTFRQAHGVR*RRNH**EASLLCH*VLNRSLPR*RLLEPAPHRSCPLSVGCLRLLLSPCFRRHQGHVQTGQSRN  275
                L+P+   +  QA G+R*R ++**EA+LLCH*VL+R L R*  LE APHR  P+ V  L LLLSPC   +QG+VQ G  R+
Subject   5570  LHPVAGRSLCQADGMR*RWHY**EAALLCH*VLHRPLSR*CFLESAPHRLSPIPVSGL*LLLSPCLGGYQGYVQAGSCRS  5809

Range 5: 5722 to 5886 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.0 bits(129) 0.0 31/55(56%) 0/55(0%) Minus/Minus
Query      188  AGEN*ASSRWSKTTRTACEASGRRERFRLCPV*T*P*CLLKHGDRRSRRQPTDRG  352
                A  +*A SRWS   R ACEA GR+ R R  P *T*P*   +HGDRRS+R  T  G
Subject   5722  AAGS*AWSRWSMRARRACEAGGRKVRLRHDPA*T*P*YPPRHGDRRSQRPLTGMG  5886

Range 6: 5569 to 5664 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
43.7 bits(89) 0.0 17/32(53%) 0/32(0%) Minus/Minus
Query       35  TQWHRREASHQWFRRQRTP*AWRKVQWGSGYS  130
                TQWH+R ASHQ   RQR P AW++ +  +G S
Subject   5569  TQWHKRAASHQ*CHRQRIPSAWQRERPATGCS  5664

Range 7: 5755 to 5943 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.3 bits(158) 0.0 34/63(54%) 0/63(0%) Plus/Plus
Query      221  VAMLQKTSRSCSNWAESKSLSSPTCFTSCPGCLTPPTRCSILSSAELSVERLFANTFPVTPKK  409
                VAM ++ SR CS+W  SKS  SPTCFTS PG  TPPT CS   S   S  RLFA+   V P++
Subject   5755  VAMPRRISRLCSSWVVSKSHFSPTCFTSSPGSHTPPTPCSTPCSVVRSKARLFASISRVIPRR  5943

Range 8: 5599 to 5661 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.0 bits(57) 0.0 14/21(67%) 0/21(0%) Plus/Plus
Query       65  PSSWCALTTEPLMRSFSPMPL  127
                PS W ALT   LMRS S MPL
Subject   5599  PS*WYALTMALLMRSCSLMPL  5661

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: NC_034205.1 Length: 6730 Number of Matches: 8

Range 1: 5544 to 5942 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
297.1 bits(642) 0.0 122/133(92%) 0/133(0%) Plus/Plus
Query       10  CVGCVWLPGCIRSPIALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPIEAVPYQSAVFDFFCRHASEDIKVMFKLGRVEISLFSHLLHKLSWLSYSTYSMLNSLQRRALRGKAVRQHFPGDSKE  408
                C   V   GCIRSP+ALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPI++VPYQSAVFDFFCRHASEDIKVMFKLGRVE+SLFSHLLHKLSWLSYSTYSMLNSLQRRAL+GKAVRQHFPGDSKE
Subject   5544  CGYYVGCEGCIRSPVALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSLQRRALKGKAVRQHFPGDSKE  5942

Range 2: 5555 to 5944 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
221.9 bits(478) 0.0 99/130(76%) 0/130(0%) Minus/Minus
Query       21  TSLESPGKCWRTAFPRRALRWRELSIE*VE*DNQDSL*SKWEKREISTLPSLNMTLMSSEAWRQKKSKTAD**GTASMGSRFQKASPRE*PIENSVA*ERSFSSMVPSSTHTMSLAKSAMGERIQPGNQT  410
                TSLESPGKCWRTA P  A R RELS+E*VE ++Q+SL*S+WEK E ST PSLN+TL+SSEAWRQKKSKTAD  GT SMGSRFQKASPRE P+ENSVA*E SFSS+VPSSTHT+SLAK A G+R+QP   T
Subject   5555  TSLESPGKCWRTALPLSARRCRELSME*VEYESQESL*SRWEKSETSTRPSLNITLISSEAWRQKKSKTADWYGTESMGSRFQKASPREWPMENSVA*ESSFSSIVPSSTHTISLAKRATGDRMQPSQPT  5944

Range 3: 5568 to 5936 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
159.1 bits(341) 0.0 68/123(55%) 0/123(0%) Minus/Minus
Query       34  GVTGKVLANSLSTESSALERIEHRVGGVRQPGQLVKQVGEERDFDSAQFEHDLDVF*SMATEEVEDSRLIGDSFDGEQVPEGVTEGVTD*ELSGIGEKLLINGSVVNAHHELGEKCNGGADTA  402
                G+T ++LANSL+ E + L+ +EH VGGV +PG+LVKQVGE+ DFD+ Q EH+LD+   MATEEV+D  L+ D   GEQ+PE +TE V D ELSGI E+LLIN ++VNA+H+LG++ +   D A
Subject   5568  GITREMLANSLAFERTTLQGVEHGVGGV*EPGELVKQVGEK*DFDTTQLEHNLDILRGMATEEVKDR*LVWD*VYGEQIPESITERVADGELSGIREQLLINSAIVNAYHQLGKESDRRPDAA  5936

Range 4: 5570 to 5809 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.0 bits(190) 0.0 44/80(55%) 0/80(0%) Plus/Plus
Query       36  LYPLPHCTFRQAHGVR*RRNH**EASLLCH*VLNRSLPR*RLLEPAPHRSCPLSVGCLRLLLSPCFRRHQGHVQTGQSRN  275
                L+P+   +  QA G+R*R ++**EA+LLCH*VL+R L R*  LE APHR  P+ V  L LLLSPC   +QG+VQ G  R+
Subject   5570  LHPVAGRSLCQADGMR*RWHY**EAALLCH*VLHRPLSR*CFLESAPHRLSPIPVSGL*LLLSPCLGGYQGYVQAGSCRS  5809

Range 5: 5722 to 5886 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.0 bits(129) 0.0 31/55(56%) 0/55(0%) Minus/Minus
Query      188  AGEN*ASSRWSKTTRTACEASGRRERFRLCPV*T*P*CLLKHGDRRSRRQPTDRG  352
                A  +*A SRWS   R ACEA GR+ R R  P *T*P*   +HGDRRS+R  T  G
Subject   5722  AAGS*AWSRWSMRARRACEAGGRKVRLRHDPA*T*P*YPPRHGDRRSQRPLTGMG  5886

Range 6: 5569 to 5664 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
43.7 bits(89) 0.0 17/32(53%) 0/32(0%) Minus/Minus
Query       35  TQWHRREASHQWFRRQRTP*AWRKVQWGSGYS  130
                TQWH+R ASHQ   RQR P AW++ +  +G S
Subject   5569  TQWHKRAASHQ*CHRQRIPSAWQRERPATGCS  5664

Range 7: 5755 to 5943 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.3 bits(158) 0.0 34/63(54%) 0/63(0%) Plus/Plus
Query      221  VAMLQKTSRSCSNWAESKSLSSPTCFTSCPGCLTPPTRCSILSSAELSVERLFANTFPVTPKK  409
                VAM ++ SR CS+W  SKS  SPTCFTS PG  TPPT CS   S   S  RLFA+   V P++
Subject   5755  VAMPRRISRLCSSWVVSKSHFSPTCFTSSPGSHTPPTPCSTPCSVVRSKARLFASISRVIPRR  5943

Range 8: 5599 to 5661 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
29.0 bits(57) 0.0 14/21(67%) 0/21(0%) Plus/Plus
Query       65  PSSWCALTTEPLMRSFSPMPL  127
                PS W ALT   LMRS S MPL
Subject   5599  PS*WYALTMALLMRSCSLMPL  5661

Grapevine rupestris vein feathering virus replicase associated polyprotein mRNA, partial cds

Sequence ID: AY128949.1 Length: 1791 Number of Matches: 8

Range 1: 597 to 995 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
282.9 bits(611) 0.0 114/133(86%) 0/133(0%) Plus/Plus
Query       10  CVGCVWLPGCIRSPIALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPIEAVPYQSAVFDFFCRHASEDIKVMFKLGRVEISLFSHLLHKLSWLSYSTYSMLNSLQRRALRGKAVRQHFPGDSKE  408
                C   V   GCIRSP+ALFAKLMVCVDDGTIDEK++SYATEFSIGHSLGDAFWNLLP+EAVPYQSAVFDFFCRHA ED+KVMFKLGRVE+SLF+HLL KL+WLSYS+Y+ LNSLQRRALRGKAVRQHFPGDSKE
Subject    597  CGYYVGCEGCIRSPVALFAKLMVCVDDGTIDEKMISYATEFSIGHSLGDAFWNLLPLEAVPYQSAVFDFFCRHAPEDVKVMFKLGRVEVSLFAHLLSKLTWLSYSSYAYLNSLQRRALRGKAVRQHFPGDSKE  995

Range 2: 608 to 997 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
214.6 bits(462) 0.0 99/130(76%) 0/130(0%) Minus/Minus
Query       21  TSLESPGKCWRTAFPRRALRWRELSIE*VE*DNQDSL*SKWEKREISTLPSLNMTLMSSEAWRQKKSKTAD**GTASMGSRFQKASPRE*PIENSVA*ERSFSSMVPSSTHTMSLAKSAMGERIQPGNQT  410
                TSLESPGKCWRTAFPRRA RW E    * E*DNQ SL  +W KRE ST PSLNMT  SS AWRQKKSKTAD *GTAS G RFQKASPRE P+ENSVA*E  FSSMVPSST TMSLAK A GER+QP   T
Subject    608  TSLESPGKCWRTAFPRRARRWSEFR*A*EE*DNQVSLERRWAKRETSTRPSLNMTFTSSGAWRQKKSKTADW*GTASRGRRFQKASPRECPMENSVA*EIIFSSMVPSSTQTMSLAKRATGERMQPSQPT  997

Range 3: 627 to 992 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
161.0 bits(345) 0.0 71/122(58%) 0/122(0%) Minus/Minus
Query       40  FGVTGKVLANSLSTESSALERIEHRVGGVRQPGQLVKQVGEERDFDSAQFEHDLDVF*SMATEEVEDSRLIGDSFDGEQVPEGVTEGVTD*ELSGIGEKLLINGSVVNAHHELGEKCNGGAD  405
                FGV  KVLAN LS E +ALER+   VGGV QPGQL ++VGEER+FD+ +FEHDL V   MA EEVE+  L+  S   ++VPEG+ +GV D E  GIG    ING+VVNA+HELG+K +GGA+
Subject    627  FGVPRKVLANCLSAEGAALERV*IGVGGVGQPGQLGEEVGEERNFDATKFEHDLHVLRGMAAEEVENR*LVRHSLKRKEVPEGIAKGVPDGEFGGIGNHFFINGAVVNANHELGKKSHGGAN  992

Range 4: 772 to 993 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.4 bits(143) 0.0 36/74(49%) 0/74(0%) Minus/Minus
Query      185  LWSHRESVGEQPFHGELCAGEN*ASSRWSKTTRTACEASGRRERFRLCPV*T*P*CLLKHGDRRSRRQPTDRGQ  406
                LWS +ES GE PF G   AG +    R S+TTR+A    GRRE+ R   V*T*P     HG RRSR+  T + Q
Subject    772  LWSPQESAGELPFRGGRGAGASLDRRRRSRTTRSAWRGGGRREKLRRDQV*T*PSRPQGHGGRRSRKPLTGKAQ  993

Range 5: 631 to 714 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.3 bits(97) 0.0 17/28(61%) 0/28(0%) Minus/Minus
Query       44  QWHRREASHQWFRRQRTP*AWRKVQWGS  127
                +WHR+   HQW RRQR P*AW+K   GS
Subject    631  RWHRKSFFHQWCRRQRKP*AWQKEPRGS  714

Range 6: 811 to 996 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.3 bits(147) 0.0 36/62(58%) 0/62(0%) Plus/Plus
Query      224  AMLQKTSRSCSNWAESKSLSSPTCFTSCPGCLTPPTRCSILSSAELSVERLFANTFPVTPKK  409
                AM  +T RSCSN   SK LSSPT   S PGC TPPT     SSA  S ER FA+TF  TPK+
Subject    811  AMPLRT*RSCSNLVASKFLSSPTSSPS*PGCPTPPTPI*TRSSAAPSAERQFASTFLGTPKR  996

Range 7: 631 to 711 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
43.7 bits(89) 0.0 18/27(67%) 0/27(0%) Plus/Plus
Query       44  APPLHFSPSSWCALTTEPLMRSFSPMP  124
                APP  F PSSW ALTT PLM+   PMP
Subject    631  APPWLFLPSSWFALTTAPLMKK*FPMP  711

Range 8: 623 to 862 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.9 bits(179) 0.0 41/80(51%) 0/80(0%) Plus/Plus
Query       36  LYPLPHCTFRQAHGVR*RRNH**EASLLCH*VLNRSLPR*RLLEPAPHRSCPLSVGCLRLLLSPCFRRHQGHVQTGQSRN  275
                L+ LP  +F QAHG+R*RR+H**+   LCH +L+R+LP   LLEP     C L V   RLLL PC    +GHVQT   R+
Subject    623  LHSLPRGSFCQAHGLR*RRHH**KNDFLCHRILHRALPWRCLLEPPSS*GCALPVSGFRLLLPPCP*GREGHVQTWSRRS  862

Nucleotide Sequence (218 letters)

Query ID:ds2015-149_49
Query definition:No definition line
Query length:122
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 18 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
22
44
66
88
110
132
154
176
198
218

Descriptions

Alignments

Grapevine rupestris vein feathering virus isolate TRAJ3 BR polyprotein gene, partial cds

Sequence ID: KX828705.1 Length: 6549 Number of Matches: 6

Range 1: 5477 to 5665 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
156.4 bits(335) 0.0 61/63(97%) 0/63(0%) Plus/Plus
Query       30  GEFCGYYVGCEGCIRSPVALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSV  218
                GEFCGYYVGCEGCIRSPVALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGD+FWNLLPI+SV
Subject   5477  GEFCGYYVGCEGCIRSPVALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDSFWNLLPIESV  5665

Range 2: 5476 to 5664 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
130.3 bits(278) 0.0 58/63(92%) 0/63(0%) Minus/Minus
Query       29  TESIGSRFQKASPRE*PMENSVA*ERSFSSMVPSSTQTMSLAKSATGERMQPSHPT**PQNSP  217
                T+SIGS+FQK SPRE*P+ENSVA*ERSFSSMVPSSTQTMSLAKSATGERMQPS PT**PQNSP
Subject   5476  TDSIGSKFQKESPRE*PIENSVA*ERSFSSMVPSSTQTMSLAKSATGERMQPSQPT**PQNSP  5664

Range 3: 5480 to 5659 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
99.8 bits(214) 0.0 41/60(68%) 0/60(0%) Minus/Minus
Query       33  VDRKQIPEGVAKGVTDGEFSGIRKKLLINGAIINANHELGEECDGGTNAALASNVVTAEL  212
                +D KQ+PEGV KGVT+ EF G+R++LLINGAI++ NHELG++ D GTNAALA+NVV AEL
Subject   5480  LDWKQVPEGVTKGVTNREFGGVREELLINGAIVHTNHELGKKRDWGTNAALAANVVAAEL  5659

Range 4: 5454 to 5660 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.4 bits(191) 0.0 42/69(61%) 0/69(0%) Plus/Plus
Query        7  SSTQTMSLASSAVTTLDARAAFVPPSHSSPSSWFALMMAPLMRSFFLMPLNSPSVTPLATPSGICFRST  213
                S     +  SSA TTL ARAAFVP S   PSSWF   MAPLMRS  L P NS  VTPL TPSG CF+S+
Subject   5454  SRKSARATVSSAATTLAARAAFVPQSRFLPSSWFVWTMAPLMRSSSLTPPNSLLVTPLVTPSGTCFQSS  5660

Range 5: 5482 to 5661 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
90.4 bits(191) 0.0 41/60(68%) 0/60(0%) Plus/Plus
Query       35  VLRLLRWMRGLHSFPRRTLRQAHGLR**WHH**EASFLCH*ILHRSLPWRRLLESASDRL  214
                VLRLLRW+RGLHSFP R   QAHGL   WHH**EA  L H IL+ SLPW  LLE AS+R+
Subject   5482  VLRLLRWLRGLHSFPSRAFCQAHGLCGRWHH**EAPLLRHRILYWSLPW*LLLELASNRV  5661

Range 6: 5472 to 5606 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.1 bits(175) 0.0 29/45(64%) 0/45(0%) Minus/Minus
Query       25  IQWHKKEASHQWCHHQRKP*AWRRVRRGNECSPRIQRSNRRTRQA  159
                I+W K+ ASHQWCH   KP*AW++ R GNECSPR QRS+RRT ++
Subject   5472  IRWRKRGASHQWCHRPHKP*AWQKARLGNECSPRSQRSSRRTHRS  5606

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: KY513701.1 Length: 6730 Number of Matches: 6

Range 1: 5535 to 5723 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
159.6 bits(342) 0.0 63/63(100%) 0/63(0%) Plus/Plus
Query       30  GEFCGYYVGCEGCIRSPVALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSV  218
                GEFCGYYVGCEGCIRSPVALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSV
Subject   5535  GEFCGYYVGCEGCIRSPVALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSV  5723

Range 2: 5534 to 5722 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
121.1 bits(258) 0.0 54/63(86%) 0/63(0%) Minus/Minus
Query       29  TESIGSRFQKASPRE*PMENSVA*ERSFSSMVPSSTQTMSLAKSATGERMQPSHPT**PQNSP  217
                TES+GSRFQKASPRE PMENSVA*E SFSS+VPSST T+SLAK ATG+RMQPS PT**PQNSP
Subject   5534  TESMGSRFQKASPREWPMENSVA*ESSFSSIVPSSTHTISLAKRATGDRMQPSQPT**PQNSP  5722

Range 3: 5538 to 5723 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.1 bits(175) 0.0 37/62(60%) 0/62(0%) Minus/Minus
Query       33  DRVDRKQIPEGVAKGVTDGEFSGIRKKLLINGAIINANHELGEECDGGTNAALASNVVTAEL  218
                D V  +QIPE + + V DGE SGIR++LLIN AI+NA H+LG+E D   +AALA++VVTAEL
Subject   5538  D*VYGEQIPESITERVADGELSGIREQLLINSAIVNAYHQLGKESDRRPDAALATHVVTAEL  5723

Range 4: 5540 to 5719 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.2 bits(160) 0.0 37/60(62%) 0/60(0%) Plus/Plus
Query       35  VLRLLRWMRGLHSFPRRTLRQAHGLR**WHH**EASFLCH*ILHRSLPWRRLLESASDRL  214
                VLRLLR +RGLH    R+L QA G+R* WH+**EA+ LCH*+LHR L     LESA  RL
Subject   5540  VLRLLRGLRGLHPVAGRSLCQADGMR*RWHY**EAALLCH*VLHRPLSR*CFLESAPHRL  5719

Range 5: 5530 to 5661 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.3 bits(147) 0.0 27/44(61%) 0/44(0%) Minus/Minus
Query       25  QWHKKEASHQWCHHQRKP*AWRRVRRGNECSPRIQRSNRRTRQA  156
                QWHK+ ASHQ CH QR P AW+R R    CSPR  RSNRRT ++
Subject   5530  QWHKRAASHQ*CHRQRIPSAWQRERPATGCSPRNPRSNRRTHRS  5661

Range 6: 5512 to 5706 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
66.1 bits(138) 0.0 36/65(55%) 0/65(0%) Plus/Plus
Query        7  SSTQTMSLASSAVTTLDARAAFVPPSHSSPSSWFALMMAPLMRSFFLMPLNSPSVTPLATPSGIC  201
                S    ++  SSAVTT  ARAA    S S PS W+AL MA LMRS  LMPL+SPS T     SGIC
Subject   5512  SRKNELATVSSAVTTWVARAASGRRSLSLPS*WYALTMALLMRSCSLMPLSSPSATLSVMLSGIC  5706

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: NC_034205.1 Length: 6730 Number of Matches: 6

Range 1: 5535 to 5723 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
159.6 bits(342) 0.0 63/63(100%) 0/63(0%) Plus/Plus
Query       30  GEFCGYYVGCEGCIRSPVALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSV  218
                GEFCGYYVGCEGCIRSPVALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSV
Subject   5535  GEFCGYYVGCEGCIRSPVALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSV  5723

Range 2: 5534 to 5722 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
121.1 bits(258) 0.0 54/63(86%) 0/63(0%) Minus/Minus
Query       29  TESIGSRFQKASPRE*PMENSVA*ERSFSSMVPSSTQTMSLAKSATGERMQPSHPT**PQNSP  217
                TES+GSRFQKASPRE PMENSVA*E SFSS+VPSST T+SLAK ATG+RMQPS PT**PQNSP
Subject   5534  TESMGSRFQKASPREWPMENSVA*ESSFSSIVPSSTHTISLAKRATGDRMQPSQPT**PQNSP  5722

Range 3: 5538 to 5723 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.1 bits(175) 0.0 37/62(60%) 0/62(0%) Minus/Minus
Query       33  DRVDRKQIPEGVAKGVTDGEFSGIRKKLLINGAIINANHELGEECDGGTNAALASNVVTAEL  218
                D V  +QIPE + + V DGE SGIR++LLIN AI+NA H+LG+E D   +AALA++VVTAEL
Subject   5538  D*VYGEQIPESITERVADGELSGIREQLLINSAIVNAYHQLGKESDRRPDAALATHVVTAEL  5723

Range 4: 5540 to 5719 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.2 bits(160) 0.0 37/60(62%) 0/60(0%) Plus/Plus
Query       35  VLRLLRWMRGLHSFPRRTLRQAHGLR**WHH**EASFLCH*ILHRSLPWRRLLESASDRL  214
                VLRLLR +RGLH    R+L QA G+R* WH+**EA+ LCH*+LHR L     LESA  RL
Subject   5540  VLRLLRGLRGLHPVAGRSLCQADGMR*RWHY**EAALLCH*VLHRPLSR*CFLESAPHRL  5719

Range 5: 5530 to 5661 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.3 bits(147) 0.0 27/44(61%) 0/44(0%) Minus/Minus
Query       25  QWHKKEASHQWCHHQRKP*AWRRVRRGNECSPRIQRSNRRTRQA  156
                QWHK+ ASHQ CH QR P AW+R R    CSPR  RSNRRT ++
Subject   5530  QWHKRAASHQ*CHRQRIPSAWQRERPATGCSPRNPRSNRRTHRS  5661

Range 6: 5512 to 5706 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
66.1 bits(138) 0.0 36/65(55%) 0/65(0%) Plus/Plus
Query        7  SSTQTMSLASSAVTTLDARAAFVPPSHSSPSSWFALMMAPLMRSFFLMPLNSPSVTPLATPSGIC  201
                S    ++  SSAVTT  ARAA    S S PS W+AL MA LMRS  LMPL+SPS T     SGIC
Subject   5512  SRKNELATVSSAVTTWVARAASGRRSLSLPS*WYALTMALLMRSCSLMPLSSPSATLSVMLSGIC  5706

Grapevine rupestris vein feathering virus isolate CHASS, complete genome

Sequence ID: KY513702.1 Length: 6716 Number of Matches: 6

Range 1: 5536 to 5724 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
157.8 bits(338) 0.0 62/63(98%) 0/63(0%) Plus/Plus
Query       30  GEFCGYYVGCEGCIRSPVALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSV  218
                GEFCGYYVGCEGCIRSPVALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPI+SV
Subject   5536  GEFCGYYVGCEGCIRSPVALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPIESV  5724

Range 2: 5535 to 5723 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
125.2 bits(267) 0.0 56/63(89%) 0/63(0%) Minus/Minus
Query       29  TESIGSRFQKASPRE*PMENSVA*ERSFSSMVPSSTQTMSLAKSATGERMQPSHPT**PQNSP  217
                T+S+GSRFQKASPRE*P+ENSVA E SFSSMVPSSTQTMSLA SATGERMQPS PT**PQNSP
Subject   5535  TDSMGSRFQKASPRE*PIENSVAYESSFSSMVPSSTQTMSLANSATGERMQPSQPT**PQNSP  5723

Range 3: 5536 to 5724 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
91.2 bits(195) 0.0 37/63(59%) 0/63(0%) Minus/Minus
Query       30  DRVDRKQIPEGVAKGVTDGEFSGIRKKLLINGAIINANHELGEECDGGTNAALASNVVTAELA  218
                DR D +QIPEGV + +TD E SGIR++LL++GA+++ +HE GE+ DGG NA LA++VV AELA
Subject   5536  DRFDGEQIPEGVTERMTD*ELSGIREQLLVDGAVVHTDHEFGEQRDGGANATLAADVVAAELA  5724

Range 4: 5535 to 5723 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
88.1 bits(186) 0.0 39/63(62%) 0/63(0%) Plus/Plus
Query       29  WRVLRLLRWMRGLHSFPRRTLRQAHGLR**WHH**EASFLCH*ILHRSLPWRRLLESASDRLC  217
                WRVLRLLR +RGLHS PRR +RQ HGL    HH  EA+ +CH*+L+RS    RLLESA  R+C
Subject   5535  WRVLRLLRRLRGLHSLPRRAVRQTHGLCGRRHHRREAALVCH*VLNRSFSR*RLLESAPHRIC  5723

Range 5: 5534 to 5722 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.0 bits(153) 0.0 35/63(56%) 0/63(0%) Plus/Plus
Query       28  LASSAVTTLDARAAFVPPSHSSPSSWFALMMAPLMRSFFLMPLNSPSVTPLATPSGICFRSTL  216
                +ASSA TT  AR AF PPS  SP+SW     AP  RS   MPL+S SV    TPSGIC  S L
Subject   5534  MASSAATTSAARVAFAPPSRCSPNSWSVWTTAPSTRSCSRMPLSSQSVILSVTPSGICSPSNL  5722

Range 6: 5537 to 5662 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
71.6 bits(150) 0.0 24/42(57%) 0/42(0%) Minus/Minus
Query       31  QWHKKEASHQWCHHQRKP*AWRRVRRGNECSPRIQRSNRRTR  156
                QWH + AS +WC    +P* WR  RRG+EC+PR +RS+RRTR
Subject   5537  QWHTRAASRRWCRRPHRP*VWRTARRGSECNPRSRRSSRRTR  5662

Grapevine rupestris vein feathering virus replicase associated polyprotein mRNA, partial cds

Sequence ID: AY128949.1 Length: 1791 Number of Matches: 6

Range 1: 588 to 776 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
153.7 bits(329) 0.0 58/63(92%) 0/63(0%) Plus/Plus
Query       30  GEFCGYYVGCEGCIRSPVALFAKLMVCVDDGTIDEKLLSYATEFSIGHSLGDAFWNLLPIDSV  218
                GEFCGYYVGCEGCIRSPVALFAKLMVCVDDGTIDEK++SYATEFSIGHSLGDAFWNLLP+++V
Subject    588  GEFCGYYVGCEGCIRSPVALFAKLMVCVDDGTIDEKMISYATEFSIGHSLGDAFWNLLPLEAV  776

Range 2: 587 to 775 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
117.9 bits(251) 0.0 55/63(87%) 0/63(0%) Minus/Minus
Query       29  TESIGSRFQKASPRE*PMENSVA*ERSFSSMVPSSTQTMSLAKSATGERMQPSHPT**PQNSP  217
                T S G RFQKASPRE PMENSVA*E  FSSMVPSSTQTMSLAK ATGERMQPS PT**PQNSP
Subject    587  TASRGRRFQKASPRECPMENSVA*EIIFSSMVPSSTQTMSLAKRATGERMQPSQPT**PQNSP  775

Range 3: 588 to 764 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
94.3 bits(202) 0.0 37/59(63%) 0/59(0%) Minus/Minus
Query       30  RKQIPEGVAKGVTDGEFSGIRKKLLINGAIINANHELGEECDGGTNAALASNVVTAELA  206
                RK++PEG+AKGV DGEF GI     INGA++NANHELG++  GG NA L ++VV AELA
Subject    588  RKEVPEGIAKGVPDGEFGGIGNHFFINGAVVNANHELGKKSHGGANATLTADVVAAELA  764

Range 4: 587 to 775 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.3 bits(195) 0.0 42/63(67%) 0/63(0%) Plus/Plus
Query       29  WRVLRLLRWMRGLHSFPRRTLRQAHGLR**WHH**EASFLCH*ILHRSLPWRRLLESASDRLC  217
                WRVLRLLR + GLHS PR +  QAHGLR*  HH**+  FLCH ILHR+LPWR LLE  S   C
Subject    587  WRVLRLLRRL*GLHSLPRGSFCQAHGLR*RRHH**KNDFLCHRILHRALPWRCLLEPPSS*GC  775

Range 5: 583 to 762 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.8 bits(170) 0.0 37/60(62%) 0/60(0%) Plus/Plus
Query       25  SLASSAVTTLDARAAFVPPSHSSPSSWFALMMAPLMRSFFLMPLNSPSVTPLATPSGICF  204
                ++ASSA TT   R AF PP    PSSWFAL  APLM+  F MP NSPS TPLA PSG  F
Subject    583  AMASSAATTSAVRVAFAPPWLFLPSSWFALTTAPLMKK*FPMPPNSPSGTPLAMPSGTSF  762

Range 6: 583 to 717 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.7 bits(161) 0.0 26/45(58%) 0/45(0%) Minus/Minus
Query       25  IQWHKKEASHQWCHHQRKP*AWRRVRRGNECSPRIQRSNRRTRQA  159
                I+WH+K   HQWC  QRKP*AW++  RG+EC+P  +RS+RRTR +
Subject    583  IRWHRKSFFHQWCRRQRKP*AWQKEPRGSECNPHSRRSSRRTRHS  717

Nucleotide Sequence (584 letters)

Query ID:ds2015-149_49
Query definition:No definition line
Query length:122
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 18 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
59
118
177
236
295
354
413
472
531
584

Descriptions

Alignments

Grapevine rupestris vein feathering virus isolate TRAJ3 BR polyprotein gene, partial cds

Sequence ID: KX828705.1 Length: 6549 Number of Matches: 13

Range 1: 5645 to 6097 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
344.7 bits(746) 0.0 143/151(95%) 0/151(0%) Plus/Plus
Query        2  LLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSLQRRALRGKAVRQHFPGDSKEVTELQGELLHTFSMSSTPRVLTGGLILPASAPMSNEAQLPVSGRPSRDDHRSDPQPTLPLAPKVQESPALT  454
                LLPI+SVPYQSAVFDFFCRHASEDIKVMFKLGRVE+SLFSHLLHKLSWLSYSTYSMLNSLQRRALRGKAVRQHFPGDSKEVTELQGELLHTFSMSSTPRVLTGGL+LP  APMSNEAQLP SGRPSRDDHRSDPQP LPLAPKVQESPAL+
Subject   5645  LLPIESVPYQSAVFDFFCRHASEDIKVMFKLGRVEISLFSHLLHKLSWLSYSTYSMLNSLQRRALRGKAVRQHFPGDSKEVTELQGELLHTFSMSSTPRVLTGGLLLPTPAPMSNEAQLPTSGRPSRDDHRSDPQPALPLAPKVQESPALS  6097

Range 2: 5644 to 6093 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
271.9 bits(587) 0.0 123/150(82%) 0/150(0%) Minus/Minus
Query        1  SAGDS*TLGARGRVG*GSERWSSREGRPETGS*ASFDMGAEAGRIKPPVRTRGVDDIEKV*SNSPCSSVTSLESPGKCWRTAFPRRALRWRELSME*VE*DSQDSLWSR*ENRETSTRPNLNMTLMSSDAWRQKKSKTADW*GTESIGSR  450
                SAGDS TLGARGR G*GSERWSSREGRPE GS ASFD+GA  GR +PPVRTRGVDDIE V*SNSPCSSVTSLESPGKCWRTA PR A R RELSME*VE*DSQ+SL SR*E RE STRP+LN+TL+SS+A RQKKSKTAD  GT+SIGS+
Subject   5644  SAGDSWTLGARGRAG*GSERWSSREGRPEVGSWASFDIGAGVGRSRPPVRTRGVDDIENV*SNSPCSSVTSLESPGKCWRTALPRSARRCRELSME*VE*DSQESL*SR*EKREISTRPSLNITLISSEA*RQKKSKTAD*YGTDSIGSK  6093

Range 3: 5645 to 6094 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
206.8 bits(445) 0.0 93/150(62%) 0/150(0%) Minus/Minus
Query        2  ERRRFLNFGRERKSRLRIRAMVITRRTTRDGQLSFI*HGSRGRKDQATSEDARS**H*KGVKQFTL*LSDFFGVTGKVLANGFSAQSSALERIEHGVSGVGQPRQLVEQMRKQGDFDTTQLEHDLDVF*CMATEEVENGGLVRDRVDRKQ  451
                ERRRFL+ GRER+SRLRIR MVI RRTTR GQL FI*H     K+QA SEDAR  *H*K VKQFTL*LS  FGVTGK+LA+ F+++ + L+RIEHGVSGV QP +LV+QMR++ D D  +LEH  D+   + T+EV++ GL+R  +D KQ
Subject   5645  ERRRFLDLGRERESRLRIRTMVIARRTTRSGQLGFI*HWGWSGKEQAASEDARGG*H*KCVKQFTL*LSYLFGVTGKMLADSFASERATLQRIEHGVSGVRQPGELVKQMREERDLDAAELEHHFDILRSVTTKEVKDCGLIRHGLDWKQ  6094

Range 4: 5646 to 6101 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
175.2 bits(376) 0.0 85/152(56%) 0/152(0%) Minus/Minus
Query        3  KV*APAIPELWAREEE*AEDQSDGHHEKDDQRRAAELHLTWEQRQEGSSHQ*GREELMTLKRCEAIHLVAQ*LLWSHRESAGERLFRAELCVGEN*AWSKWSRTAKTACGADEKTGRLRHDPT*T*P*CLLMHGDRRSRKRRTGKGQSRSEA  458
                +V APAIP  WARE E AEDQ+DGH EKDDQ+ AA LHLT     EG+  Q*GRE  MTLK CEAIHLVAQ  LWSHRE+ G +L        EN*AWSKWS+TA+ AC ADE+  R R    *T  *      D+RS++ R    ++R EA
Subject   5646  RVRAPAIPGPWAREGEQAEDQNDGHREKDDQKWAAGLHLTLGLEWEGAGRQ*GREGWMTLKMCEAIHLVAQLPLWSHRENVGGQLCLGARDAAEN*AWSKWSKTARRACEADERRERSRRGRA*TSL*YPQKRDDKRSQRLRIDTARTRLEA  6101

Range 5: 5912 to 6043 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
95.5 bits(202) 0.0 39/44(89%) 0/44(0%) Plus/Plus
Query      451  HTFSMSSTPRVLTGGLILPASAHMSNEAQLPVSGRPSRDDHRSD  582
                HTFSMSSTPRVLTGGL+LP  A MSNEAQLP SGRPSRDDHRSD
Subject   5912  HTFSMSSTPRVLTGGLLLPTPAPMSNEAQLPTSGRPSRDDHRSD  6043

Range 6: 5763 to 5930 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
88.6 bits(187) 0.0 37/56(66%) 0/56(0%) Plus/Plus
Query      120  LICSTSCLGCPTPLTPCSILSNAELCAEKPFASTFPVTPKKSLSYKVNCFTPFQCH  287
                LIC TS  GC TPLTPCSIL +      K  A+ FPVTPK+ LSYKVNCFT FQCH
Subject   5763  LICFTSSPGCLTPLTPCSILCSVARSEAKLSANIFPVTPKR*LSYKVNCFTHFQCH  5930

Range 7: 5647 to 6033 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
111.5 bits(237) 0.0 73/129(57%) 0/129(0%) Plus/Plus
Query        4  ASDRLCPLPVRRFRLLLSPCIRRHQGHVQVGSCRSLPVFSSAPQXXXXXXXXXXXXQFSPTQSSARKSRSPALSR*LQRSH*ATR*IASHLFNVINSSRPHWWLDPSCLCSHVK*SSAARLWSSFS**P  390
                AS+R+  + +R   LLLS     +Q  VQ    R L + SSA QA+LAVLLHLLHAQFS    + R+S  P  SR*LQR +*ATR*IASH+FNVI+ SRPHW   PS    +VK*S AA  WSSFS *P
Subject   5647  ASNRVRAVSIRSL*LLLSSRF*GYQSDVQARPRRDLSLLSSASQALLAVLLHLLHAQFSAASRAPRQSCPPTFSR*LQRGN*ATR*IASHIFNVIHPSRPHWRPAPSHSSPNVK*SPAAHFWSSFSR*P  6033

Range 8: 5908 to 6045 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
81.7 bits(172) 0.0 35/46(76%) 0/46(0%) Minus/Minus
Query      447  GSERWSSREGRPETGS*ASLDM*AEAGRIKPPVRTRGVDDIEKV*A  584
                GSERWSSREGRPE GS AS D+ A  GR +PPVRTRGVDDIE V*+
Subject   5908  GSERWSSREGRPEVGSWASFDIGAGVGRSRPPVRTRGVDDIENV*S  6045

Range 9: 5982 to 6098 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.0 bits(153) 0.0 32/39(82%) 0/39(0%) Plus/Plus
Query      339  CQMKLSCPSLVVLLVMTIALILSLLFLSRPKFRNRRRSH  455
                CQMK SCP LVVLL MTI LILSLL LSRP+ RNRRRSH
Subject   5982  CQMKPSCPLLVVLLAMTIVLILSLLSLSRPRSRNRRRSH  6098

Range 10: 5910 to 6044 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.6 bits(128) 0.0 27/45(60%) 0/45(0%) Minus/Minus
Query      449  DQSDGHHEKDDQRRAVELH*TCEQRQEGSSHQ*GREELMTLKRCE  583
                DQ+DGH EKDDQ+ A  LH T     EG+  Q*GRE  MTLK CE
Subject   5910  DQNDGHREKDDQKWAAGLHLTLGLEWEGAGRQ*GREGWMTLKMCE  6044

Range 11: 1840 to 1896 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.5 bits(45) 0.0 10/19(53%) 0/19(0%) Minus/Minus
Query      178  ESPGKCWRTAFPRRALRWR  234
                E  GKC RT    R L WR
Subject   1840  EKRGKCSRTRKRGRILAWR  1896

Range 12: 5912 to 6043 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.9 bits(120) 0.0 29/44(66%) 0/44(0%) Minus/Minus
Query      451  IRAMVITRRTTRDGQLSFIRHVSRGRKDQATSEDARS**H*KGV  582
                IR MVI RRTTR GQL FI H     K+QA SEDAR  *H*K V
Subject   5912  IRTMVIARRTTRSGQLGFI*HWGWSGKEQAASEDARGG*H*KCV  6043

Range 13: 5911 to 6045 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.1 bits(116) 0.0 27/45(60%) 0/45(0%) Plus/Plus
Query      450  SHLFNVINSSRPHWWLDPSCLCSHV**SSTARLWSSFS**PSL*S  584
                SH+FNVI+ SRPHW   PS    +V *S  A  WSSFS *PS *S
Subject   5911  SHIFNVIHPSRPHWRPAPSHSSPNVK*SPAAHFWSSFSR*PSF*S  6045

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: KY513701.1 Length: 6730 Number of Matches: 16

Range 1: 5703 to 6155 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
349.8 bits(757) 0.0 145/151(96%) 0/151(0%) Plus/Plus
Query        2  LLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSLQRRALRGKAVRQHFPGDSKEVTELQGELLHTFSMSSTPRVLTGGLILPASAPMSNEAQLPVSGRPSRDDHRSDPQPTLPLAPKVQESPALT  454
                LLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSLQRRAL+GKAVRQHFPGDSKEVTELQGELLHTFSMS+TPRVLTGGL+LP SAPMSNEAQLPVSGRPSRDDHRSDPQPT+PLAPKVQESPAL+
Subject   5703  LLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSLQRRALKGKAVRQHFPGDSKEVTELQGELLHTFSMSTTPRVLTGGLLLPVSAPMSNEAQLPVSGRPSRDDHRSDPQPTIPLAPKVQESPALS  6155

Range 2: 5702 to 6151 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
276.9 bits(598) 0.0 123/150(82%) 0/150(0%) Minus/Minus
Query        1  SAGDS*TLGARGRVG*GSERWSSREGRPETGS*ASFDMGAEAGRIKPPVRTRGVDDIEKV*SNSPCSSVTSLESPGKCWRTAFPRRALRWRELSME*VE*DSQDSLWSR*ENRETSTRPNLNMTLMSSDAWRQKKSKTADW*GTESIGSR  450
                SAGDS TLGARG VG*GSERWSSREGRPETG+ ASFDMGAE GR +PPVRTRGV DIE V*SNSPCSSVTSLESPGKCWRTA P  A R RELSME*VE +SQ+SL SR E  ETSTRP+LN+TL+SS+AWRQKKSKTADW GTES+GSR
Subject   5702  SAGDSWTLGARGIVG*GSERWSSREGRPETGNWASFDMGAETGRRRPPVRTRGVVDIENV*SNSPCSSVTSLESPGKCWRTALPLSARRCRELSME*VEYESQESL*SRWEKSETSTRPSLNITLISSEAWRQKKSKTADWYGTESMGSR  6151

Range 3: 5703 to 6152 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
195.8 bits(421) 0.0 92/150(61%) 0/150(0%) Minus/Minus
Query        2  ERRRFLNFGRERKSRLRIRAMVITRRTTRDGQLSFI*HGSRGRKDQATSEDARS**H*KGVKQFTL*LSDFFGVTGKVLANGFSAQSSALERIEHGVSGVGQPRQLVEQMRKQGDFDTTQLEHDLDVF*CMATEEVENGGLVRDRVDRKQ  451
                ERR FL+FGRER SRLRIRAMVI RRTTR+GQL FI*HGSR  +++A SE+ARS *H*K VKQFTL*LS   G+T ++LAN  + + + L+ +EHGV GV +P +LV+Q+ ++ DFDTTQLEH+LD+   MATEEV++  LV D V  +Q
Subject   5703  ERRGFLDFGRERNSRLRIRAMVIARRTTRNGQLGFI*HGSRDGEEKAASENARSG*H*KCVKQFTL*LSHLLGITREMLANSLAFERTTLQGVEHGVGGV*EPGELVKQVGEK*DFDTTQLEHNLDILRGMATEEVKDR*LVWD*VYGEQ  6152

Range 4: 5908 to 6159 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
134.4 bits(287) 0.0 58/84(69%) 0/84(0%) Minus/Minus
Query      207  KV*APAIPELWAREEE*AEDQSDGHHEKDDQRRAAELHLTWEQRQEGSSHQ*GREELMTLKRCEAIHLVAQ*LLWSHRESAGER  458
                +V AP IP LWAREE *AEDQSDGH EKDDQ+RA  LHLTWEQR+ G   Q* REE +TLK CEAIHLVAQ   W+H  +AGE+
Subject   5908  RVRAPGIPGLWAREE**AEDQSDGHREKDDQKRATGLHLTWEQRRGGEGRQ*EREEWLTLKMCEAIHLVAQSPPWNHPGNAGEQ  6159

Range 5: 5716 to 5877 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.4 bits(143) 0.0 31/54(57%) 0/54(0%) Minus/Minus
Query       15  N*AWSKWSRTAKTACGADEKTGRLRHDPT*T*P*CLLMHGDRRSRKRRTGKGQS  176
                +*AWS+WS  A+ AC A  +  RLRHDP *T*P*    HGDRRS++  TG G S
Subject   5716  S*AWSRWSMRARRACEAGGRKVRLRHDPA*T*P*YPPRHGDRRSQRPLTGMGLS  5877

Range 6: 5702 to 6091 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
133.5 bits(285) 0.0 76/130(58%) 0/130(0%) Plus/Plus
Query        1  SASDRLCPLPVRRFRLLLSPCIRRHQGHVQVGSCRSLPVFSSAPQXXXXXXXXXXXXQFSPTQSSARKSRSPALSR*LQRSH*ATR*IASHLFNVINSSRPHWWLDPSCLCSHVK*SSAARLWSSFS**P  390
                SA  RL P+PV    LLLSPC+  +QG+VQ GSCRSL     A QA+LA++LHLLHAQ      + R+  SPA   * Q   *ATR*IASH+FNV +SSR HW   P  LCSHVK*S  AR WSSFS *P
Subject   5702  SAPHRLSPIPVSGL*LLLSPCLGGYQGYVQAGSCRSLTFLPPASQALLALILHLLHAQLPAASCAQRQGCSPAFPG*FQGGD*ATR*IASHIFNVNHSSRSHWRPSPPRLCSHVK*SPVARFWSSFSR*P  6091

Range 7: 5970 to 6101 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.2 bits(208) 0.0 40/44(91%) 0/44(0%) Plus/Plus
Query      451  HTFSMSSTPRVLTGGLILPASAHMSNEAQLPVSGRPSRDDHRSD  582
                HTFSMS+TPRVLTGGL+LP SA MSNEAQLPVSGRPSRDDHRSD
Subject   5970  HTFSMSTTPRVLTGGLLLPVSAPMSNEAQLPVSGRPSRDDHRSD  6101

Range 8: 5827 to 5985 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.7 bits(124) 0.0 27/53(51%) 0/53(0%) Plus/Plus
Query      126  CSTSCLGCPTPLTPCSILSNAELCAEKPFASTFPVTPKKSLSYKVNCFTPFQC  284
                C TS  G  TP TPCS   +      + FAS   V P++ LSYKVNCFT FQC
Subject   5827  CFTSSPGSHTPPTPCSTPCSVVRSKARLFASISRVIPRR*LSYKVNCFTHFQC  5985

Range 9: 5966 to 6103 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.1 bits(175) 0.0 36/46(78%) 0/46(0%) Minus/Minus
Query      447  GSERWSSREGRPETGS*ASLDM*AEAGRIKPPVRTRGVDDIEKV*A  584
                GSERWSSREGRPETG+ AS DM AE GR +PPVRTRGV DIE V*+
Subject   5966  GSERWSSREGRPETGNWASFDMGAETGRRRPPVRTRGVVDIENV*S  6103

Range 10: 1675 to 1737 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.4 bits(47) 0.0 9/21(43%) 0/21(0%) Minus/Minus
Query      108  AWSKWSRTAKTACGADEKTGR  170
                AW  WS T    C AD++  R
Subject   1675  AWPGWS*TGSKWCAADDERFR  1737

Range 11: 4694 to 4774 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.5 bits(45) 0.0 10/27(37%) 0/27(0%) Minus/Minus
Query      319  SERWSSREGRPETGS*ASFDMGAEAGR  399
                +E+W+S+   P   S      GAE GR
Subject   4694  AEQWASKRREPRISSLGVMR*GAEDGR  4774

Range 12: 6040 to 6156 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.7 bits(161) 0.0 34/39(87%) 0/39(0%) Plus/Plus
Query      339  CQMKLSCPSLVVLLVMTIALILSLLFLSRPKFRNRRRSH  455
                CQMK SCP LVVLL MTIALILSLLFLSRPK RN RRSH
Subject   6040  CQMKPSCPFLVVLLAMTIALILSLLFLSRPKSRNPRRSH  6156

Range 13: 5968 to 6102 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.7 bits(148) 0.0 30/45(67%) 0/45(0%) Minus/Minus
Query      449  DQSDGHHEKDDQRRAVELH*TCEQRQEGSSHQ*GREELMTLKRCE  583
                DQSDGH EKDDQ+RA  LH T EQR+ G   Q* REE +TLK CE
Subject   5968  DQSDGHREKDDQKRATGLHLTWEQRRGGEGRQ*EREEWLTLKMCE  6102

Range 14: 5969 to 6103 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.0 bits(140) 0.0 31/45(69%) 0/45(0%) Plus/Plus
Query      450  SHLFNVINSSRPHWWLDPSCLCSHV**SSTARLWSSFS**PSL*S  584
                SH+FNV +SSR HW   P  LCSHV *S  AR WSSFS *PSL*S
Subject   5969  SHIFNVNHSSRSHWRPSPPRLCSHVK*SPVARFWSSFSR*PSL*S  6103

Range 15: 5827 to 5871 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.5 bits(45) 0.0 9/15(60%) 0/15(0%) Plus/Plus
Query      126  CSTSCLGCPTPLTPC  170
                C TS  G  TP TPC
Subject   5827  CFTSSPGSHTPPTPC  5871

Range 16: 5970 to 6101 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.1 bits(127) 0.0 30/44(68%) 0/44(0%) Minus/Minus
Query      451  IRAMVITRRTTRDGQLSFIRHVSRGRKDQATSEDARS**H*KGV  582
                IRAMVI RRTTR+GQL FI H SR  +++A SE+ARS *H*K V
Subject   5970  IRAMVIARRTTRNGQLGFI*HGSRDGEEKAASENARSG*H*KCV  6101

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: NC_034205.1 Length: 6730 Number of Matches: 16

Range 1: 5703 to 6155 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
349.8 bits(757) 0.0 145/151(96%) 0/151(0%) Plus/Plus
Query        2  LLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSLQRRALRGKAVRQHFPGDSKEVTELQGELLHTFSMSSTPRVLTGGLILPASAPMSNEAQLPVSGRPSRDDHRSDPQPTLPLAPKVQESPALT  454
                LLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSLQRRAL+GKAVRQHFPGDSKEVTELQGELLHTFSMS+TPRVLTGGL+LP SAPMSNEAQLPVSGRPSRDDHRSDPQPT+PLAPKVQESPAL+
Subject   5703  LLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSLQRRALKGKAVRQHFPGDSKEVTELQGELLHTFSMSTTPRVLTGGLLLPVSAPMSNEAQLPVSGRPSRDDHRSDPQPTIPLAPKVQESPALS  6155

Range 2: 5702 to 6151 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
276.9 bits(598) 0.0 123/150(82%) 0/150(0%) Minus/Minus
Query        1  SAGDS*TLGARGRVG*GSERWSSREGRPETGS*ASFDMGAEAGRIKPPVRTRGVDDIEKV*SNSPCSSVTSLESPGKCWRTAFPRRALRWRELSME*VE*DSQDSLWSR*ENRETSTRPNLNMTLMSSDAWRQKKSKTADW*GTESIGSR  450
                SAGDS TLGARG VG*GSERWSSREGRPETG+ ASFDMGAE GR +PPVRTRGV DIE V*SNSPCSSVTSLESPGKCWRTA P  A R RELSME*VE +SQ+SL SR E  ETSTRP+LN+TL+SS+AWRQKKSKTADW GTES+GSR
Subject   5702  SAGDSWTLGARGIVG*GSERWSSREGRPETGNWASFDMGAETGRRRPPVRTRGVVDIENV*SNSPCSSVTSLESPGKCWRTALPLSARRCRELSME*VEYESQESL*SRWEKSETSTRPSLNITLISSEAWRQKKSKTADWYGTESMGSR  6151

Range 3: 5703 to 6152 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
195.8 bits(421) 0.0 92/150(61%) 0/150(0%) Minus/Minus
Query        2  ERRRFLNFGRERKSRLRIRAMVITRRTTRDGQLSFI*HGSRGRKDQATSEDARS**H*KGVKQFTL*LSDFFGVTGKVLANGFSAQSSALERIEHGVSGVGQPRQLVEQMRKQGDFDTTQLEHDLDVF*CMATEEVENGGLVRDRVDRKQ  451
                ERR FL+FGRER SRLRIRAMVI RRTTR+GQL FI*HGSR  +++A SE+ARS *H*K VKQFTL*LS   G+T ++LAN  + + + L+ +EHGV GV +P +LV+Q+ ++ DFDTTQLEH+LD+   MATEEV++  LV D V  +Q
Subject   5703  ERRGFLDFGRERNSRLRIRAMVIARRTTRNGQLGFI*HGSRDGEEKAASENARSG*H*KCVKQFTL*LSHLLGITREMLANSLAFERTTLQGVEHGVGGV*EPGELVKQVGEK*DFDTTQLEHNLDILRGMATEEVKDR*LVWD*VYGEQ  6152

Range 4: 5908 to 6159 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
134.4 bits(287) 0.0 58/84(69%) 0/84(0%) Minus/Minus
Query      207  KV*APAIPELWAREEE*AEDQSDGHHEKDDQRRAAELHLTWEQRQEGSSHQ*GREELMTLKRCEAIHLVAQ*LLWSHRESAGER  458
                +V AP IP LWAREE *AEDQSDGH EKDDQ+RA  LHLTWEQR+ G   Q* REE +TLK CEAIHLVAQ   W+H  +AGE+
Subject   5908  RVRAPGIPGLWAREE**AEDQSDGHREKDDQKRATGLHLTWEQRRGGEGRQ*EREEWLTLKMCEAIHLVAQSPPWNHPGNAGEQ  6159

Range 5: 5716 to 5877 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.4 bits(143) 0.0 31/54(57%) 0/54(0%) Minus/Minus
Query       15  N*AWSKWSRTAKTACGADEKTGRLRHDPT*T*P*CLLMHGDRRSRKRRTGKGQS  176
                +*AWS+WS  A+ AC A  +  RLRHDP *T*P*    HGDRRS++  TG G S
Subject   5716  S*AWSRWSMRARRACEAGGRKVRLRHDPA*T*P*YPPRHGDRRSQRPLTGMGLS  5877

Range 6: 5702 to 6091 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
133.5 bits(285) 0.0 76/130(58%) 0/130(0%) Plus/Plus
Query        1  SASDRLCPLPVRRFRLLLSPCIRRHQGHVQVGSCRSLPVFSSAPQXXXXXXXXXXXXQFSPTQSSARKSRSPALSR*LQRSH*ATR*IASHLFNVINSSRPHWWLDPSCLCSHVK*SSAARLWSSFS**P  390
                SA  RL P+PV    LLLSPC+  +QG+VQ GSCRSL     A QA+LA++LHLLHAQ      + R+  SPA   * Q   *ATR*IASH+FNV +SSR HW   P  LCSHVK*S  AR WSSFS *P
Subject   5702  SAPHRLSPIPVSGL*LLLSPCLGGYQGYVQAGSCRSLTFLPPASQALLALILHLLHAQLPAASCAQRQGCSPAFPG*FQGGD*ATR*IASHIFNVNHSSRSHWRPSPPRLCSHVK*SPVARFWSSFSR*P  6091

Range 7: 5970 to 6101 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.2 bits(208) 0.0 40/44(91%) 0/44(0%) Plus/Plus
Query      451  HTFSMSSTPRVLTGGLILPASAHMSNEAQLPVSGRPSRDDHRSD  582
                HTFSMS+TPRVLTGGL+LP SA MSNEAQLPVSGRPSRDDHRSD
Subject   5970  HTFSMSTTPRVLTGGLLLPVSAPMSNEAQLPVSGRPSRDDHRSD  6101

Range 8: 5827 to 5985 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.7 bits(124) 0.0 27/53(51%) 0/53(0%) Plus/Plus
Query      126  CSTSCLGCPTPLTPCSILSNAELCAEKPFASTFPVTPKKSLSYKVNCFTPFQC  284
                C TS  G  TP TPCS   +      + FAS   V P++ LSYKVNCFT FQC
Subject   5827  CFTSSPGSHTPPTPCSTPCSVVRSKARLFASISRVIPRR*LSYKVNCFTHFQC  5985

Range 9: 5966 to 6103 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
83.1 bits(175) 0.0 36/46(78%) 0/46(0%) Minus/Minus
Query      447  GSERWSSREGRPETGS*ASLDM*AEAGRIKPPVRTRGVDDIEKV*A  584
                GSERWSSREGRPETG+ AS DM AE GR +PPVRTRGV DIE V*+
Subject   5966  GSERWSSREGRPETGNWASFDMGAETGRRRPPVRTRGVVDIENV*S  6103

Range 10: 1675 to 1737 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
24.4 bits(47) 0.0 9/21(43%) 0/21(0%) Minus/Minus
Query      108  AWSKWSRTAKTACGADEKTGR  170
                AW  WS T    C AD++  R
Subject   1675  AWPGWS*TGSKWCAADDERFR  1737

Range 11: 4694 to 4774 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.5 bits(45) 0.0 10/27(37%) 0/27(0%) Minus/Minus
Query      319  SERWSSREGRPETGS*ASFDMGAEAGR  399
                +E+W+S+   P   S      GAE GR
Subject   4694  AEQWASKRREPRISSLGVMR*GAEDGR  4774

Range 12: 6040 to 6156 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
76.7 bits(161) 0.0 34/39(87%) 0/39(0%) Plus/Plus
Query      339  CQMKLSCPSLVVLLVMTIALILSLLFLSRPKFRNRRRSH  455
                CQMK SCP LVVLL MTIALILSLLFLSRPK RN RRSH
Subject   6040  CQMKPSCPFLVVLLAMTIALILSLLFLSRPKSRNPRRSH  6156

Range 13: 5968 to 6102 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.7 bits(148) 0.0 30/45(67%) 0/45(0%) Minus/Minus
Query      449  DQSDGHHEKDDQRRAVELH*TCEQRQEGSSHQ*GREELMTLKRCE  583
                DQSDGH EKDDQ+RA  LH T EQR+ G   Q* REE +TLK CE
Subject   5968  DQSDGHREKDDQKRATGLHLTWEQRRGGEGRQ*EREEWLTLKMCE  6102

Range 14: 5969 to 6103 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.0 bits(140) 0.0 31/45(69%) 0/45(0%) Plus/Plus
Query      450  SHLFNVINSSRPHWWLDPSCLCSHV**SSTARLWSSFS**PSL*S  584
                SH+FNV +SSR HW   P  LCSHV *S  AR WSSFS *PSL*S
Subject   5969  SHIFNVNHSSRSHWRPSPPRLCSHVK*SPVARFWSSFSR*PSL*S  6103

Range 15: 5827 to 5871 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.5 bits(45) 0.0 9/15(60%) 0/15(0%) Plus/Plus
Query      126  CSTSCLGCPTPLTPC  170
                C TS  G  TP TPC
Subject   5827  CFTSSPGSHTPPTPC  5871

Range 16: 5970 to 6101 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.1 bits(127) 0.0 30/44(68%) 0/44(0%) Minus/Minus
Query      451  IRAMVITRRTTRDGQLSFIRHVSRGRKDQATSEDARS**H*KGV  582
                IRAMVI RRTTR+GQL FI H SR  +++A SE+ARS *H*K V
Subject   5970  IRAMVIARRTTRNGQLGFI*HGSRDGEEKAASENARSG*H*KCV  6101

Grapevine rupestris vein feathering virus isolate CHASS, complete genome

Sequence ID: KY513702.1 Length: 6716 Number of Matches: 12

Range 1: 5704 to 6156 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
348.8 bits(755) 0.0 145/151(96%) 0/151(0%) Plus/Plus
Query        2  LLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSLQRRALRGKAVRQHFPGDSKEVTELQGELLHTFSMSSTPRVLTGGLILPASAPMSNEAQLPVSGRPSRDDHRSDPQPTLPLAPKVQESPALT  454
                LLPI+SVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLH+LSWLSYSTYSMLNSLQRRALRGKAVRQHFPGDSKEVTELQGELLHTFSMS+TPRVLTGGLILPA APMSNEAQLP+SGRPSRDDHRSDPQPTLPLAPKVQESPAL+
Subject   5704  LLPIESVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHRLSWLSYSTYSMLNSLQRRALRGKAVRQHFPGDSKEVTELQGELLHTFSMSTTPRVLTGGLILPAPAPMSNEAQLPISGRPSRDDHRSDPQPTLPLAPKVQESPALS  6156

Range 2: 5703 to 6152 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
292.9 bits(633) 0.0 129/150(86%) 0/150(0%) Minus/Minus
Query        1  SAGDS*TLGARGRVG*GSERWSSREGRPETGS*ASFDMGAEAGRIKPPVRTRGVDDIEKV*SNSPCSSVTSLESPGKCWRTAFPRRALRWRELSME*VE*DSQDSLWSR*ENRETSTRPNLNMTLMSSDAWRQKKSKTADW*GTESIGSR  450
                SAGDS TLGARGRVG*GSERWSSREGRPE GS ASFDMGA AGR++PPVRTRGV DIE V*SNSPCSSVTSLESPGKCWRTA PRRA RWRELSME*VE +SQ+SL S+*E RETSTRP+LNMTLMSS+AWRQKKSKTAD *GT+S+GSR
Subject   5703  SAGDSWTLGARGRVG*GSERWSSREGRPEMGSWASFDMGAGAGRMRPPVRTRGVVDIENV*SNSPCSSVTSLESPGKCWRTALPRRARRWRELSME*VEYESQESL*SK*EKRETSTRPSLNMTLMSSEAWRQKKSKTAD**GTDSMGSR  6152

Range 3: 5704 to 6153 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
248.5 bits(536) 0.0 107/150(71%) 0/150(0%) Minus/Minus
Query        2  ERRRFLNFGRERKSRLRIRAMVITRRTTRDGQLSFI*HGSRGRKDQATSEDARS**H*KGVKQFTL*LSDFFGVTGKVLANGFSAQSSALERIEHGVSGVGQPRQLVEQMRKQGDFDTTQLEHDLDVF*CMATEEVENGGLVRDRVDRKQ  451
                ERRRFL+FGRERKSRLRIRAMVITRRTTRDGQL FI*HG R R+D+   +DARS *H*+ VKQFTL*LSD FGVT KVLANGF+A+ S LER+EHGVSGV +P + V+Q+R++GDFD T+LEHD DV * +ATEE+++ GL+RDR D +Q
Subject   5704  ERRRFLDFGRERKSRLRIRAMVITRRTTRDGQLGFI*HGGRSREDETAGKDARSG*H*ECVKQFTL*LSDLFGVTRKVLANGFAAEGSTLERVEHGVSGV*EPGEPVKQVREEGDFDATKLEHDFDVL*SVATEEIKDSGLIRDRFDGEQ  6153

Range 4: 5714 to 6160 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
231.1 bits(498) 0.0 103/149(69%) 0/149(0%) Minus/Minus
Query       12  KV*APAIPELWAREEE*AEDQSDGHHEKDDQRRAAELHLTWEQRQEGSSHQ*GREELMTLKRCEAIHLVAQ*LLWSHRESAGERLFRAELCVGEN*AWSKWSRTAKTACGADEKTGRLRHDPT*T*P*CLLMHGDRRSRKRRTGKGQSR  458
                +V APAIP LWAREEE*AEDQSDGHHEKDDQR AA LHLTW Q Q G   +*GREE +TL+ CEAIHLVAQ* LWSH+ESAGERL R  L  GE+*AWSKWS  A+ AC A E+ GRLR D  *T* *C L  GDRR++++R  KGQ R
Subject   5714  RVRAPAIPGLWAREEE*AEDQSDGHHEKDDQRWAAGLHLTWGQEQGG*DRR*GREEWLTLRMCEAIHLVAQ*PLWSHQESAGERLCRGGLDAGES*AWSKWSMRARRACEASERRGRLRRDQA*T*L*CPLKRGDRRNQRQRIDKGQIR  6160

Range 5: 5971 to 6102 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.2 bits(208) 0.0 40/44(91%) 0/44(0%) Plus/Plus
Query      451  HTFSMSSTPRVLTGGLILPASAHMSNEAQLPVSGRPSRDDHRSD  582
                HTFSMS+TPRVLTGGLILPA A MSNEAQLP+SGRPSRDDHRSD
Subject   5971  HTFSMSTTPRVLTGGLILPAPAPMSNEAQLPISGRPSRDDHRSD  6102

Range 6: 5756 to 5986 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
92.7 bits(196) 0.0 52/77(68%) 0/77(0%) Plus/Plus
Query       54  VAMHQKTXXXXXXXXXXXXPCFLICSTSCLGCPTPLTPCSILSNAELCAEKPFASTFPVTPKKSLSYKVNCFTPFQC  284
                VA  Q+TS+SCSS V SKSP  L C T   G  TPLTPCS LS+ E  A KPFASTF VTPK+SLSYKVNCFT  QC
Subject   5756  VATLQRTSKSCSSLVASKSPSSLTCFTGSPGSHTPLTPCSTLSSVEPSAAKPFASTFLVTPKRSLSYKVNCFTHSQC  5986

Range 7: 5703 to 6092 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
152.7 bits(327) 0.0 85/130(65%) 0/130(0%) Plus/Plus
Query        1  SASDRLCPLPVRRFRLLLSPCIRRHQGHVQVGSCRSLPVFSSAPQXXXXXXXXXXXXQFSPTQSSARKSRSPALSR*LQRSH*ATR*IASHLFNVINSSRPHWWLDPSCLCSHVK*SSAARLWSSFS**P  390
                SA  R+CPL +R    LLSP  R HQ HVQ  S RSLP+ S A QA+LA++LHLLHAQ SP  S  R+SRSPALS *LQR H*ATR*IASH+ NV +SSRP+    P C C HVK*S AA LWSSFS**P
Subject   5703  SAPHRICPLSIRCL*FLLSPRFRGHQSHVQAWSRRSLPLLSLASQALLALILHLLHAQLSPASSPPRQSRSPALSW*LQRGH*ATR*IASHILNVNHSSRPYRRSHPPCSCPHVK*SPAAHLWSSFS**P  6092

Range 8: 6041 to 6157 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.5 bits(178) 0.0 37/39(95%) 0/39(0%) Plus/Plus
Query      339  CQMKLSCPSLVVLLVMTIALILSLLFLSRPKFRNRRRSH  455
                CQMK SCPSLVVLLVMTIALILSLLFLSRPK RNRRRSH
Subject   6041  CQMKPSCPSLVVLLVMTIALILSLLFLSRPKSRNRRRSH  6157

Range 9: 5967 to 6104 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
82.2 bits(173) 0.0 36/46(78%) 0/46(0%) Minus/Minus
Query      447  GSERWSSREGRPETGS*ASLDM*AEAGRIKPPVRTRGVDDIEKV*A  584
                GSERWSSREGRPE GS AS DM A AGR++PPVRTRGV DIE V*+
Subject   5967  GSERWSSREGRPEMGSWASFDMGAGAGRMRPPVRTRGVVDIENV*S  6104

Range 10: 5969 to 6103 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.0 bits(140) 0.0 29/45(64%) 0/45(0%) Minus/Minus
Query      449  DQSDGHHEKDDQRRAVELH*TCEQRQEGSSHQ*GREELMTLKRCE  583
                DQSDGHHEKDDQR A  LH T  Q Q G   +*GREE +TL+ CE
Subject   5969  DQSDGHHEKDDQRWAAGLHLTWGQEQGG*DRR*GREEWLTLRMCE  6103

Range 11: 5971 to 6102 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
64.8 bits(135) 0.0 30/44(68%) 0/44(0%) Minus/Minus
Query      451  IRAMVITRRTTRDGQLSFIRHVSRGRKDQATSEDARS**H*KGV  582
                IRAMVITRRTTRDGQL FI H  R R+D+   +DARS *H*+ V
Subject   5971  IRAMVITRRTTRDGQLGFI*HGGRSREDETAGKDARSG*H*ECV  6102

Range 12: 5970 to 6104 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
61.1 bits(127) 0.0 29/45(64%) 0/45(0%) Plus/Plus
Query      450  SHLFNVINSSRPHWWLDPSCLCSHV**SSTARLWSSFS**PSL*S  584
                SH+ NV +SSRP+    P C C HV *S  A LWSSFS**PSL*S
Subject   5970  SHILNVNHSSRPYRRSHPPCSCPHVK*SPAAHLWSSFS**PSL*S  6104

Grapevine rupestris vein feathering virus replicase associated polyprotein mRNA, partial cds

Sequence ID: AY128949.1 Length: 1791 Number of Matches: 13

Range 1: 756 to 1208 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
311.3 bits(673) 0.0 127/151(84%) 0/151(0%) Plus/Plus
Query        2  LLPIDSVPYQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSLQRRALRGKAVRQHFPGDSKEVTELQGELLHTFSMSSTPRVLTGGLILPASAPMSNEAQLPVSGRPSRDDHRSDPQPTLPLAPKVQESPALT  454
                LLP+++VPYQSAVFDFFCRHA ED+KVMFKLGRVEVSLF+HLL KL+WLSYS+Y+ LNSLQRRALRGKAVRQHFPGDSKEVTELQGELLHTFSMSS P  LTGGL+L  + PMSNEAQLP SGRPSRDDHR+DPQP LP+APKVQESPAL+
Subject    756  LLPLEAVPYQSAVFDFFCRHAPEDVKVMFKLGRVEVSLFAHLLSKLTWLSYSSYAYLNSLQRRALRGKAVRQHFPGDSKEVTELQGELLHTFSMSSPPSKLTGGLLLSTTPPMSNEAQLPASGRPSRDDHRTDPQPALPVAPKVQESPALS  1208

Range 2: 755 to 1204 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
239.8 bits(517) 0.0 110/150(73%) 0/150(0%) Minus/Minus
Query        1  SAGDS*TLGARGRVG*GSERWSSREGRPETGS*ASFDMGAEAGRIKPPVRTRGVDDIEKV*SNSPCSSVTSLESPGKCWRTAFPRRALRWRELSME*VE*DSQDSLWSR*ENRETSTRPNLNMTLMSSDAWRQKKSKTADW*GTESIGSR  450
                SAGDS TLGA GR G*GS RWSSREGRPE GS ASFDMG       PPV   G DDIE V SNSPCSSVTSLESPGKCWRTAFPRRA RW E    * E*D+Q SL  R   RETSTRP+LNMT  SS AWRQKKSKTADW*GT S G R
Subject    755  SAGDSWTLGATGRAG*GSVRWSSREGRPEAGSWASFDMGGVVESRSPPVSFEGGDDIENVWSNSPCSSVTSLESPGKCWRTAFPRRARRWSEFR*A*EE*DNQVSLERRWAKRETSTRPSLNMTFTSSGAWRQKKSKTADW*GTASRGRR  1204

Range 3: 756 to 1205 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
194.9 bits(419) 0.0 95/150(63%) 0/150(0%) Minus/Minus
Query        2  ERRRFLNFGRERKSRLRIRAMVITRRTTRDGQLSFI*HGSRGRKDQATSEDARS**H*KGVKQFTL*LSDFFGVTGKVLANGFSAQSSALERIEHGVSGVGQPRQLVEQMRKQGDFDTTQLEHDLDVF*CMATEEVENGGLVRDRVDRKQ  451
                ERRRFL+FGR+RKSRLRI AMVITRRTTR GQL FI*HG RG + ++ SE    **H*K V+QFTL*LS  FGV  KVLAN  SA+ +ALER+  GV GVGQP QL E++ ++ +FD T+ EHDL V   MA EEVEN  LVR  + RK+
Subject    756  ERRRFLDFGRDRKSRLRISAMVITRRTTRSGQLGFI*HGGRGGEQKSASELRGW**H*KCVEQFTL*LSYLFGVPRKVLANCLSAEGAALERV*IGVGGVGQPGQLGEEVGEERNFDATKFEHDLHVLRGMAAEEVENR*LVRHSLKRKE  1205

Range 4: 760 to 1203 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
153.7 bits(329) 0.0 78/148(53%) 0/148(0%) Minus/Minus
Query        6  APAIPELWAREEE*AEDQSDGHHEKDDQRRAAELHLTWEQRQEGSSHQ*GREELMTLKRCEAIHLVAQ*LLWSHRESAGERLFRAELCVGEN*AWSKWSRTAKTACGADEKTGRLRHDPT*T*P*CLLMHGDRRSRKRRTGKGQSRSE  449
                APAI  LWAR+EE AEDQ DGHHEKDDQ+RA  LHLTW         Q*    +MTLK C AIHLVAQ  LWS +ESAGE  FR     G +    + SRT ++A     +  +LR D  *T*P     HG RRSRK  TGK Q + E
Subject    760  APAILGLWARQEEQAEDQCDGHHEKDDQKRAVGLHLTWGAWWRAEVRQ*ASRVVMTLKMCGAIHLVAQLPLWSPQESAGELPFRGGRGAGASLDRRRRSRTTRSAWRGGGRREKLRRDQV*T*PSRPQGHGGRRSRKPLTGKAQPQEE  1203

Range 5: 1093 to 1209 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
79.0 bits(166) 0.0 34/39(87%) 0/39(0%) Plus/Plus
Query      339  CQMKLSCPSLVVLLVMTIALILSLLFLSRPKFRNRRRSH  455
                CQMK +CP LVVLLVMTIALILSLLFLSRPK +NRRRSH
Subject   1093  CQMKPNCPLLVVLLVMTIALILSLLFLSRPKSKNRRRSH  1209

Range 6: 898 to 1041 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.1 bits(151) 0.0 31/48(65%) 0/48(0%) Plus/Plus
Query      144  GCPTPLTPCSILSNAELCAEKPFASTFPVTPKKSLSYKVNCFTPFQCH  287
                GCPTP TP    S+A   AE+ FASTF  TPK+ LSYKVNC T FQCH
Subject    898  GCPTPPTPI*TRSSAAPSAERQFASTFLGTPKR*LSYKVNCSTHFQCH  1041

Range 7: 773 to 862 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
40.5 bits(82) 0.0 18/30(60%) 0/30(0%) Plus/Plus
Query       19  CPLPVRRFRLLLSPCIRRHQGHVQVGSCRS  108
                C LPV  FRLLL PC    +GHVQ  S RS
Subject    773  CALPVSGFRLLLPPCP*GREGHVQTWSRRS  862

Range 8: 1023 to 1154 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.8 bits(170) 0.0 33/44(75%) 0/44(0%) Plus/Plus
Query      451  HTFSMSSTPRVLTGGLILPASAHMSNEAQLPVSGRPSRDDHRSD  582
                HTFSMSS P  LTGGL+L  +  MSNEAQLP SGRPSRDDHR+D
Subject   1023  HTFSMSSPPSKLTGGLLLSTTPPMSNEAQLPASGRPSRDDHRTD  1154

Range 9: 926 to 1144 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.3 bits(169) 0.0 40/73(55%) 0/73(0%) Plus/Plus
Query      172  QFSPTQSSARKSRSPALSR*LQRSH*ATR*IASHLFNVINSSRPHWWLDPSCLCSHVK*SSAARLWSSFS**P  390
                + +P     RK  SPALS  LQR +*ATR*IA H+FNVI +   HW         HVK*S  AR WSSFS**P
Subject    926  KLAPAPRPPRKGSSPALSWGLQRGN*ATR*IAPHIFNVITTLEAHWRTSALHHAPHVK*SPTARFWSSFS**P  1144

Range 10: 1025 to 1156 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.3 bits(121) 0.0 27/44(61%) 0/44(0%) Minus/Minus
Query      453  GSERWSSREGRPETGS*ASLDM*AEAGRIKPPVRTRGVDDIEKV  584
                GS RWSSREGRPE GS AS DM        PPV   G DDIE V
Subject   1025  GSVRWSSREGRPEAGSWASFDMGGVVESRSPPVSFEGGDDIENV  1156

Range 11: 1024 to 1155 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.3 bits(110) 0.0 24/44(55%) 0/44(0%) Minus/Minus
Query      452  DQSDGHHEKDDQRRAVELH*TCEQRQEGSSHQ*GREELMTLKRC  583
                DQ DGHHEKDDQ+RAV LH T          Q*    +MTLK C
Subject   1024  DQCDGHHEKDDQKRAVGLHLTWGAWWRAEVRQ*ASRVVMTLKMC  1155

Range 12: 1023 to 1154 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.6 bits(104) 0.0 27/44(61%) 0/44(0%) Minus/Minus
Query      451  IRAMVITRRTTRDGQLSFIRHVSRGRKDQATSEDARS**H*KGV  582
                I AMVITRRTTR GQL FI H  RG + ++ SE    **H*K V
Subject   1023  ISAMVITRRTTRSGQLGFI*HGGRGGEQKSASELRGW**H*KCV  1154

Range 13: 1025 to 1156 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
50.1 bits(103) 0.0 25/44(57%) 0/44(0%) Plus/Plus
Query      453  HLFNVINSSRPHWWLDPSCLCSHV**SSTARLWSSFS**PSL*S  584
                H+FNVI +   HW         HV *S TAR WSSFS**PS *S
Subject   1025  HIFNVITTLEAHWRTSALHHAPHVK*SPTARFWSSFS**PSH*S  1156

Nucleotide Sequence (166 letters)

Query ID:ds2015-149_49
Query definition:No definition line
Query length:122
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 18 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
17
34
51
68
85
102
119
136
153
166

Descriptions

Alignments

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: KY513701.1 Length: 6730 Number of Matches: 6

Range 1: 5727 to 5888 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
131.2 bits(280) 0.0 54/54(100%) 0/54(0%) Plus/Plus
Query        3  YQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSLQR  164
                YQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSLQR
Subject   5727  YQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSLQR  5888

Range 2: 5729 to 5887 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
99.6 bits(211) 0.0 42/53(79%) 0/53(0%) Minus/Minus
Query        5  RWRELSME*VE*DSQDSLWSRWENRETSTRPNLNMTLMSSDAWRQKKSKTADW  163
                R RELSME*VE +SQ+SL SRWE  ETSTRP+LN+TL+SS+AWRQKKSKTADW
Subject   5729  RCRELSME*VEYESQESL*SRWEKSETSTRPSLNITLISSEAWRQKKSKTADW  5887

Range 3: 5727 to 5885 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.5 bits(152) 0.0 30/53(57%) 0/53(0%) Minus/Minus
Query        3  LERIEHGVSGVGQPRQLVEQMGKQGDFDTTQLEHDLDVF*CMATEEIENGGLV  161
                L+ +EHGV GV +P +LV+Q+G++ DFDTTQLEH+LD+   MATEE+++  LV
Subject   5727  LQGVEHGVGGV*EPGELVKQVGEK*DFDTTQLEHNLDILRGMATEEVKDR*LV  5885

Range 4: 5728 to 5877 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.5 bits(141) 0.0 29/50(58%) 0/50(0%) Minus/Minus
Query        4  N*AWSKWSRTAKTACGADGKTGRLRHDPT*T*P*CLLMHGDRRNRKRRTG  153
                +*AWS+WS  A+ AC A G+  RLRHDP *T*P*    HGDRR+++  TG
Subject   5728  S*AWSRWSMRARRACEAGGRKVRLRHDPA*T*P*YPPRHGDRRSQRPLTG  5877

Range 5: 5726 to 5836 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 20/37(54%) 0/37(0%) Plus/Plus
Query        2  LPVRRFRFLLSPCIRRHQGHVQVGSCRSLPVFPSAPQ  112
                +PV     LLSPC+  +QG+VQ GSCRSL   P A Q
Subject   5726  IPVSGL*LLLSPCLGGYQGYVQAGSCRSLTFLPPASQ  5836

Range 6: 5821 to 5874 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.1 bits(55) 0.0 11/18(61%) 0/18(0%) Plus/Plus
Query       97  PICSTSCLGCPTPLTPCS  150
                P C TS  G  TP TPCS
Subject   5821  PTCFTSSPGSHTPPTPCS  5874

Grapevine rupestris vein feathering virus isolate Mauzac, complete genome

Sequence ID: NC_034205.1 Length: 6730 Number of Matches: 6

Range 1: 5727 to 5888 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
131.2 bits(280) 0.0 54/54(100%) 0/54(0%) Plus/Plus
Query        3  YQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSLQR  164
                YQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSLQR
Subject   5727  YQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSLQR  5888

Range 2: 5729 to 5887 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
99.6 bits(211) 0.0 42/53(79%) 0/53(0%) Minus/Minus
Query        5  RWRELSME*VE*DSQDSLWSRWENRETSTRPNLNMTLMSSDAWRQKKSKTADW  163
                R RELSME*VE +SQ+SL SRWE  ETSTRP+LN+TL+SS+AWRQKKSKTADW
Subject   5729  RCRELSME*VEYESQESL*SRWEKSETSTRPSLNITLISSEAWRQKKSKTADW  5887

Range 3: 5727 to 5885 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
72.5 bits(152) 0.0 30/53(57%) 0/53(0%) Minus/Minus
Query        3  LERIEHGVSGVGQPRQLVEQMGKQGDFDTTQLEHDLDVF*CMATEEIENGGLV  161
                L+ +EHGV GV +P +LV+Q+G++ DFDTTQLEH+LD+   MATEE+++  LV
Subject   5727  LQGVEHGVGGV*EPGELVKQVGEK*DFDTTQLEHNLDILRGMATEEVKDR*LV  5885

Range 4: 5728 to 5877 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.5 bits(141) 0.0 29/50(58%) 0/50(0%) Minus/Minus
Query        4  N*AWSKWSRTAKTACGADGKTGRLRHDPT*T*P*CLLMHGDRRNRKRRTG  153
                +*AWS+WS  A+ AC A G+  RLRHDP *T*P*    HGDRR+++  TG
Subject   5728  S*AWSRWSMRARRACEAGGRKVRLRHDPA*T*P*YPPRHGDRRSQRPLTG  5877

Range 5: 5726 to 5836 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
48.7 bits(100) 0.0 20/37(54%) 0/37(0%) Plus/Plus
Query        2  LPVRRFRFLLSPCIRRHQGHVQVGSCRSLPVFPSAPQ  112
                +PV     LLSPC+  +QG+VQ GSCRSL   P A Q
Subject   5726  IPVSGL*LLLSPCLGGYQGYVQAGSCRSLTFLPPASQ  5836

Range 6: 5821 to 5874 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
28.1 bits(55) 0.0 11/18(61%) 0/18(0%) Plus/Plus
Query       97  PICSTSCLGCPTPLTPCS  150
                P C TS  G  TP TPCS
Subject   5821  PTCFTSSPGSHTPPTPCS  5874

Grapevine rupestris vein feathering virus isolate TRAJ3 BR polyprotein gene, partial cds

Sequence ID: KX828705.1 Length: 6549 Number of Matches: 4

Range 1: 5669 to 5830 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
130.7 bits(279) 0.0 53/54(98%) 0/54(0%) Plus/Plus
Query        3  YQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSLQR  164
                YQSAVFDFFCRHASEDIKVMFKLGRVE+SLFSHLLHKLSWLSYSTYSMLNSLQR
Subject   5669  YQSAVFDFFCRHASEDIKVMFKLGRVEISLFSHLLHKLSWLSYSTYSMLNSLQR  5830

Range 2: 5674 to 5829 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
84.9 bits(179) 0.0 41/52(79%) 0/52(0%) Minus/Minus
Query        8  RWRELSME*VE*DSQDSLWSRWENRETSTRPNLNMTLMSSDAWRQKKSKTAD  163
                R RELSME*VE*DSQ+SL SR E RE STRP+LN+TL+SS+A RQKKSKTAD
Subject   5674  RCRELSME*VE*DSQESL*SR*EKREISTRPSLNITLISSEA*RQKKSKTAD  5829

Range 3: 5669 to 5827 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.5 bits(141) 0.0 26/53(49%) 0/53(0%) Minus/Minus
Query        3  LERIEHGVSGVGQPRQLVEQMGKQGDFDTTQLEHDLDVF*CMATEEIENGGLV  161
                L+RIEHGVSGV QP +LV+QM ++ D D  +LEH  D+   + T+E+++ GL+
Subject   5669  LQRIEHGVSGVRQPGELVKQMREERDLDAAELEHHFDILRSVTTKEVKDCGLI  5827

Range 4: 5676 to 5822 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.3 bits(97) 0.0 23/49(47%) 0/49(0%) Minus/Minus
Query       10  EN*AWSKWSRTAKTACGADGKTGRLRHDPT*T*P*CLLMHGDRRNRKRR  156
                EN*AWSKWS+TA+ AC AD +  R R    *T  *      D+R+++ R
Subject   5676  EN*AWSKWSKTARRACEADERRERSRRGRA*TSL*YPQKRDDKRSQRLR  5822

Grapevine rupestris vein feathering virus isolate CHASS, complete genome

Sequence ID: KY513702.1 Length: 6716 Number of Matches: 4

Range 1: 5728 to 5889 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
129.8 bits(277) 0.0 53/54(98%) 0/54(0%) Plus/Plus
Query        3  YQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSLQR  164
                YQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLH+LSWLSYSTYSMLNSLQR
Subject   5728  YQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHRLSWLSYSTYSMLNSLQR  5889

Range 2: 5733 to 5888 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
98.7 bits(209) 0.0 43/52(83%) 0/52(0%) Minus/Minus
Query        8  RWRELSME*VE*DSQDSLWSRWENRETSTRPNLNMTLMSSDAWRQKKSKTAD  163
                RWRELSME*VE +SQ+SL S+ E RETSTRP+LNMTLMSS+AWRQKKSKTAD
Subject   5733  RWRELSME*VEYESQESL*SK*EKRETSTRPSLNMTLMSSEAWRQKKSKTAD  5888

Range 3: 5728 to 5886 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
80.8 bits(170) 0.0 32/53(60%) 0/53(0%) Minus/Minus
Query        3  LERIEHGVSGVGQPRQLVEQMGKQGDFDTTQLEHDLDVF*CMATEEIENGGLV  161
                LER+EHGVSGV +P + V+Q+ ++GDFD T+LEHD DV * +ATEEI++ GL+
Subject   5728  LERVEHGVSGV*EPGEPVKQVREEGDFDATKLEHDFDVL*SVATEEIKDSGLI  5886

Range 4: 5726 to 5884 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.7 bits(148) 0.0 31/53(58%) 0/53(0%) Minus/Minus
Query        1  GEN*AWSKWSRTAKTACGADGKTGRLRHDPT*T*P*CLLMHGDRRNRKRRTGK  159
                GE+*AWSKWS  A+ AC A  + GRLR D  *T* *C L  GDRRN+++R  K
Subject   5726  GES*AWSKWSMRARRACEASERRGRLRRDQA*T*L*CPLKRGDRRNQRQRIDK  5884

Grapevine rupestris vein feathering virus replicase associated polyprotein mRNA, partial cds

Sequence ID: AY128949.1 Length: 1791 Number of Matches: 3

Range 1: 780 to 941 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
115.6 bits(246) 0.0 46/54(85%) 0/54(0%) Plus/Plus
Query        3  YQSAVFDFFCRHASEDIKVMFKLGRVEVSLFSHLLHKLSWLSYSTYSMLNSLQR  164
                YQSAVFDFFCRHA ED+KVMFKLGRVEVSLF+HLL KL+WLSYS+Y+ LNSLQR
Subject    780  YQSAVFDFFCRHAPEDVKVMFKLGRVEVSLFAHLLSKLTWLSYSSYAYLNSLQR  941

Range 2: 779 to 940 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
85.8 bits(181) 0.0 38/54(70%) 0/54(0%) Minus/Minus
Query        2  RWRELSME*VE*DSQDSLWSRWENRETSTRPNLNMTLMSSDAWRQKKSKTADW*  163
                RW E    * E*D+Q SL  RW  RETSTRP+LNMT  SS AWRQKKSKTADW*
Subject    779  RWSEFR*A*EE*DNQVSLERRWAKRETSTRPSLNMTFTSSGAWRQKKSKTADW*  940

Range 3: 780 to 941 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
68.9 bits(144) 0.0 31/54(57%) 0/54(0%) Minus/Minus
Query        3  ALERIEHGVSGVGQPRQLVEQMGKQGDFDTTQLEHDLDVF*CMATEEIENGGLV  164
                ALER+  GV GVGQP QL E++G++ +FD T+ EHDL V   MA EE+EN  LV
Subject    780  ALERV*IGVGGVGQPGQLGEEVGEERNFDATKFEHDLHVLRGMAAEEVENR*LV  941