This html page seems to have been stripped by Galaxy.
Disable Galaxy's html sanitization feature to view the full page (see sanitize_all_html in your galaxy's universe_wsgi.ini), or download this page instead of viewing it in Galaxy.

Queries

Nucleotide Sequence (945 letters)

Query ID:ds2016-55_2
Query definition:No definition line
Query length:1402
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 6 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
95
190
285
380
475
570
665
760
855
945

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
290.4 290.4 18% 2.15e-94 88% ABH07009

Alignments

unknown [Grapevine virus A]

Sequence ID: gb|ABH07009.1| Length: 175 Number of Matches: 1

Range 1: 7 to 175 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
290.4 bits(742) 0.0 149/169(88%) 0/169(0%) Minus/Plus
Query      437  TELVEFLRLGLDRSTLGNGSIESLPFDRCIRLLEGLRSLGYASIDNVLHVLGGGEPDRFEILKVFRAQGVAISEAYQLGLTKSLSFSPRPVSLIXXXXXDRIARCASFLPVDLGAVIGELVINFERSRLSVDLYINNKKVCSRIKYSAGDAQYVHRRFSGFKGIITRSS  943
                TEL++FLR GLDRSTLG+GSIESLP DRCIRLLEGLR+LGY+SIDNVLHVLGGGEPDRF+IL+VFRAQGVA+SEAY+LGLTKSLSFSPRPVSLILDDLLDRIAR ASFLPVDLGAV GELV+NFERSRLSVDLY+NNKKVCSRIKYSAGD +YV +RFSGFKGI+TRSS
Subject      7  TELLDFLRFGLDRSTLGSGSIESLPLDRCIRLLEGLRNLGYSSIDNVLHVLGGGEPDRFQILRVFRAQGVAVSEAYELGLTKSLSFSPRPVSLILDDLLDRIARGASFLPVDLGAVNGELVVNFERSRLSVDLYVNNKKVCSRIKYSAGDPKYVQQRFSGFKGIVTRSS  175

Nucleotide Sequence (367 letters)

Query ID:ds2016-55_2
Query definition:No definition line
Query length:1402
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 6 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
37
74
111
148
185
222
259
296
333
367

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
241.9 241.9 33% 1.949e-70 91% AFV73358

Alignments

195 kDa replicase [Grapevine virus A]

Sequence ID: gb|AFV73358.1| Length: 1710 Number of Matches: 1

Range 1: 904 to 1025 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
241.9 bits(616) 0.0 111/122(91%) 0/122(0%) Plus/Plus
Query        2  VLLGKYNKGKMHSASLEEPIEVLTSFGFAGSGKSHWSQTILQSCEVEKTLVISPRKVLKDDWVGKISKKHKVVTFEVAFTDDFGCKAIVIDEIGLLPPGYVDLVISVFHPTTLVLLGDPPQS  367
                VLLGKYNKGKMHSA LEEP+EVLTSFGFAGSGKSHW QTIL+SC+VEKTL+ISPRKVLKDDWVGKISKKHKVVTFEVAF DDFGCKAIVIDEIGLLPPGY+DLVISVF P+TLVLLGDP QS
Subject    904  VLLGKYNKGKMHSAELEEPVEVLTSFGFAGSGKSHWCQTILRSCDVEKTLIISPRKVLKDDWVGKISKKHKVVTFEVAFMDDFGCKAIVIDEIGLLPPGYIDLVISVFRPSTLVLLGDPLQS  1025

Nucleotide Sequence (601 letters)

Query ID:ds2016-55_2
Query definition:No definition line
Query length:1402
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 6 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
61
122
183
244
305
366
427
488
549
601

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
334.0 334.0 33% 1.258e-101 92% ABG37965

Alignments

putative replicase [Grapevine virus A]

Sequence ID: gb|ABG37965.1| Length: 1710 Number of Matches: 1

Range 1: 1133 to 1332 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
334.0 bits(855) 0.0 184/200(92%) 0/200(0%) Plus/Plus
Query        1  EDEDVMVAFTRSRGEIAINVDKKLKEVLLRTSKSELLRKILNGETFRRSNIITLVKKHIPEAVIIFEENRLASNVDYEERLAGDPYLKSXXXXXXXXXXXXXXXXXXXXXXPMKTHLALSEKLNELAPFDLKAKEDREQYTDAGRTEQIDEEGYGQWGANPMSHKALYLRHTSDDTATFMMSVKKRLRYRNYEGNRRKYL  600
                EDEDVMVAFTRSRGEIAI+VDKKLKEVLLRTSKSELLRKIL+GET+RRS+II LVKKHIPEA+++FEENRLASNVDYEERLAGDPYLKSLLSLYEDIEEEEVE+EEPVALEP++THL LSEKLNEL PFDLKAKEDREQYT+AGRTEQIDEEGYGQWGANPM+HKALYLRHTSDDTATFMMSVKKRLRYR+YEGNRRKYL
Subject   1133  EDEDVMVAFTRSRGEIAISVDKKLKEVLLRTSKSELLRKILSGETYRRSSIIALVKKHIPEALVVFEENRLASNVDYEERLAGDPYLKSLLSLYEDIEEEEVEIEEPVALEPIRTHLPLSEKLNELIPFDLKAKEDREQYTEAGRTEQIDEEGYGQWGANPMTHKALYLRHTSDDTATFMMSVKKRLRYRSYEGNRRKYL  1332

Nucleotide Sequence (463 letters)

Query ID:ds2016-55_2
Query definition:No definition line
Query length:1402
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 6 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
47
94
141
188
235
282
329
376
423
463

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
285.0 285.0 30% 1.405e-94 98% AHC13414

Alignments

coat protein [Grapevine virus A]

Sequence ID: gb|AHC13414.1| Length: 198 Number of Matches: 1

Range 1: 1 to 140 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
285.0 bits(728) 0.0 137/140(98%) 0/140(0%) Plus/Plus
Query       17  MGQYARRGEIRAVIEELVLARAELSEDTSSEGYDRTMYLNTLFGYIALVGTSKKATHYGEVDIVGPNASRKTGLDPRGKINVASMVTRMRTLSAAVSEGPVKGATLRQMCEPFAQNAYDFLVVMAELGTYTQLASKMTRS  436
                MGQ+ARRGEIRAVIEELVLARAELSEDTS+EGYDRTMYLNTLFGYIALVGTSKKATHYGEVDIVGPNASRKTGLDPRGKINVASMV RMRTLSAAVSEGPVKGATLRQMCEPFAQNAYDFLVVMAELGTYTQLASKMTRS
Subject      1  MGQFARRGEIRAVIEELVLARAELSEDTSTEGYDRTMYLNTLFGYIALVGTSKKATHYGEVDIVGPNASRKTGLDPRGKINVASMVARMRTLSAAVSEGPVKGATLRQMCEPFAQNAYDFLVVMAELGTYTQLASKMTRS  140

Nucleotide Sequence (334 letters)

Query ID:ds2016-55_2
Query definition:No definition line
Query length:1402
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 6 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
34
68
102
136
170
204
238
272
306
334

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
226.5 226.5 33% 3.125e-65 95% AFV73358

Alignments

195 kDa replicase [Grapevine virus A]

Sequence ID: gb|AFV73358.1| Length: 1710 Number of Matches: 1

Range 1: 1323 to 1432 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
226.5 bits(576) 0.0 104/110(95%) 0/110(0%) Plus/Plus
Query        3  NYEGKRRKYLACHGIGRQMFSVLKGVYQWRDIESLPELERCEKEFMRKRVEKSASLIEQHSGRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQTIACFAHSVLCRFG  332
                +YEG RRKYLACHGIGRQMFSVLK  YQWRDIESLPELE+CEKEFMRKRVEKSA+LIEQHSGRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQTIACFAHSVLCRFG
Subject   1323  SYEGNRRKYLACHGIGRQMFSVLKETYQWRDIESLPELEKCEKEFMRKRVEKSAALIEQHSGRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQTIACFAHSVLCRFG  1432

Nucleotide Sequence (454 letters)

Query ID:ds2016-55_2
Query definition:No definition line
Query length:1402
Program:BLASTX 2.2.29+
Database:/bank/blastdb/nr

Graphic Summary

Distribution of 6 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
46
92
138
184
230
276
322
368
414
454

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
308.1 308.1 33% 2.39e-93 94% AFV73358

Alignments

195 kDa replicase [Grapevine virus A]

Sequence ID: gb|AFV73358.1| Length: 1710 Number of Matches: 1

Range 1: 165 to 315 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
308.1 bits(788) 0.0 142/151(94%) 0/151(0%) Minus/Plus
Query        2  HDEVQYWSLDEMQRFLGSLEHAKRVVYSIVYPAEVDAGFGQSLFPEAYTFDLKEGRLTWYPDGKAEGAYTQPVNPWLLGCSKTVDSRSRSWTITRLQTVGAHLLFSAVLGSFLTGDSYKYDNFTIINPNDILRGRRGCKPLYLRARMIRPT  454
                HDEVQYWSLDEMQRFLGSL+H KRVVYSIVYPAEVDAGF QSLFPEAYTFDLK+GRLTWYPDGKAEGAYTQPVNPWLLGCSKTVDS SRSWTIT+LQTVGAH +FSAVLGSFLT DSYKYDNFTIINPNDILRGRRGCKPLYLRARMIRPT
Subject    165  HDEVQYWSLDEMQRFLGSLKHVKRVVYSIVYPAEVDAGFSQSLFPEAYTFDLKDGRLTWYPDGKAEGAYTQPVNPWLLGCSKTVDSESRSWTITKLQTVGAHHIFSAVLGSFLTEDSYKYDNFTIINPNDILRGRRGCKPLYLRARMIRPT  315