Queries
Nucleotide Sequence (426 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
326.9 | 1812.5 | 26% | 9.033e-88 | 95% | GQ352632.1 | |
326.4 | 1811.1 | 26% | 1.241e-87 | 96% | KJ174518.1 | |
326.4 | 1811.1 | 26% | 1.241e-87 | 96% | KX756668.1 | |
325.0 | 1804.3 | 26% | 3.218e-87 | 95% | KX701860.1 | |
322.3 | 1778.6 | 26% | 2.164e-86 | 94% | EU259806.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 623, complete genome
Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 8
Range 1: 10330 to 10752 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
326.9 bits(707) | 0.0 | 138/141(98%) | 0/141(0%) | Plus/Minus |
Query 1 YQLQEYNH*PQMGKSRLC*KWFQNLYLLPYLTKRGITLS*DLY*WWSFAVTSGRQT**PATE*SQRRNRPPTTVLPV*NHP*TTTLTSI*NHDITFAQHEDHSRGAFPYFSFKANLFYSNLARKPIYVATKPRLAPINALN 423 YQLQEYNH*PQMGKSRLC*KWFQNLYLLPYLTKRGITLS*DLY*WWSFAVTSGRQT**PATE*SQRRNRPPTTVLPV*NHP*TTTLTSI*NH+ITFAQHEDHSRGAFPYFSFKANLFY NLARKPIYVATKP LAPINALN Subject 10330 YQLQEYNH*PQMGKSRLC*KWFQNLYLLPYLTKRGITLS*DLY*WWSFAVTSGRQT**PATE*SQRRNRPPTTVLPV*NHP*TTTLTSI*NHNITFAQHEDHSRGAFPYFSFKANLFYPNLARKPIYVATKPHLAPINALN 10752
Range 2: 10331 to 10750 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
318.6 bits(689) | 0.0 | 136/140(97%) | 0/140(0%) | Plus/Minus |
Query 3 PATGVQPLTPDGEKQIVLKVVPKSIPTSISN*KRNHTVLRPVLMVELCCNLGTTNVITSNRIITKTKSTTNNSIACLKSSINNYAYFNIKSRYYLRSARRSFTWRLPLFLF*GELVLFQSRTKTYLCRY*TSPSADKRTQ 422 PATGVQPLTPDGEKQIVLKVVPKSIPTSISN*KRNHTVLRPVLMVELCCNLGTTNVITSNRIITKTKSTTNNSIACLKSSINNYAYFNIKS+Y+LRSARRSF WRLPLFLF*GELVL QSRTKTYLCRY*TSPSADKRTQ Subject 10331 PATGVQPLTPDGEKQIVLKVVPKSIPTSISN*KRNHTVLRPVLMVELCCNLGTTNVITSNRIITKTKSTTNNSIACLKSSINNYAYFNIKSQYHLRSARRSFAWRLPLFLF*GELVLSQSRTKTYLCRY*TSPSADKRTQ 10750
Range 3: 10329 to 10751 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
310.8 bits(672) | 0.0 | 138/141(98%) | 0/141(0%) | Plus/Minus |
Query 2 TSYRSTTTDPRWGKADCAESGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRXXXXXXXHKDEIDHQQQYCLFKIIHKQLRLLQYKITILPSLSTKIIHVAPSPISLLRRTCSIPISHENLFMSLLNLA*RR*THST 424 TSYRSTTTDPRWGKADCAESGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRNNQQQNNHKDEIDHQQQYCLFKIIHKQLRLLQYKITI PSLSTKII VAPSPISLLRRTCSIPISHENLFMSLLNL *RR*THST Subject 10329 TSYRSTTTDPRWGKADCAESGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRNNQQQNNHKDEIDHQQQYCLFKIIHKQLRLLQYKITISPSLSTKIIRVAPSPISLLRRTCSIPISHENLFMSLLNLT*RR*THST 10751
Range 4: 10330 to 10728 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
307.6 bits(665) | 0.0 | 130/133(98%) | 0/133(0%) | Minus/Plus |
Query 25 VECVYRR*ARFSSDINRFSCEIGIEQVRLKREIGEGAT*MIFVLSEGNIVILY*SKRSCLWMILNRQYCCWWSISSL*LFCCWLLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPLSAQSAFPHLGS 423 VECVYRR* RFSSDINRFSCEIGIEQVRLKREIGEGAT MIFVLSEG+IVILY*SKRSCLWMILNRQYCCWWSISSL*LFCCWLLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPLSAQSAFPHLGS Subject 10330 VECVYRR*VRFSSDINRFSCEIGIEQVRLKREIGEGATRMIFVLSEGDIVILY*SKRSCLWMILNRQYCCWWSISSL*LFCCWLLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPLSAQSAFPHLGS 10728
Range 5: 10547 to 10750 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
181.1 bits(389) | 0.0 | 68/68(100%) | 0/68(0%) | Minus/Plus |
Query 3 RFRLCDYSVAGYYVCRPEVTAKLHH*YRS*DSVIPLLVRYGSRYRFWNHFQHNLLFPIWGQWLYSCSW 206 RFRLCDYSVAGYYVCRPEVTAKLHH*YRS*DSVIPLLVRYGSRYRFWNHFQHNLLFPIWGQWLYSCSW Subject 10547 RFRLCDYSVAGYYVCRPEVTAKLHH*YRS*DSVIPLLVRYGSRYRFWNHFQHNLLFPIWGQWLYSCSW 10750
Range 6: 10332 to 10529 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
137.2 bits(293) | 0.0 | 63/66(95%) | 0/66(0%) | Minus/Plus |
Query 224 *VRLSALGEV**RHK*VFVRDWNRTSSP*KRNRGRRHVNDLRAERR*YRDFILK*A*LFMDDFKQA 421 *VRLSALGEV**RHK*VFVRDW+RTSSP*KRNRGRRH NDLRAERR*Y DFILK*A*LFMDDFKQA Subject 10332 *VRLSALGEV**RHK*VFVRDWDRTSSP*KRNRGRRHANDLRAERR*YCDFILK*A*LFMDDFKQA 10529
Range 7: 10596 to 10751 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.0 bits(262) | 0.0 | 52/52(100%) | 0/52(0%) | Minus/Plus |
Query 2 PRLQQSSTINTGLRTV*FLF*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAG 157 PRLQQSSTINTGLRTV*FLF*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAG Subject 10596 PRLQQSSTINTGLRTV*FLF*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAG 10751
Range 8: 10331 to 10498 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
107.4 bits(228) | 0.0 | 53/56(95%) | 0/56(0%) | Minus/Plus |
Query 255 LSAFIGARRGLVAT*IGFRARLE*NKFALKEK*GKAPRE*SSC*AKVIS*FYIEVS 422 LSAFIGAR GLVAT*IGFRARL *NKFALKEK*GKAPRE*SSC*AKVI *FYIEVS Subject 10331 LSAFIGAR*GLVAT*IGFRARLG*NKFALKEK*GKAPRE*SSC*AKVIL*FYIEVS 10498
Grapevine leafroll associated virus 3, complete genome
Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 8
Range 1: 10330 to 10752 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
326.4 bits(706) | 0.0 | 138/141(98%) | 0/141(0%) | Plus/Minus |
Query 1 YQLQEYNH*PQMGKSRLC*KWFQNLYLLPYLTKRGITLS*DLY*WWSFAVTSGRQT**PATE*SQRRNRPPTTVLPV*NHP*TTTLTSI*NHDITFAQHEDHSRGAFPYFSFKANLFYSNLARKPIYVATKPRLAPINALN 423 YQLQEYNH*PQMGKSRLC*KWFQNLYLLPYLTKRGITLS*DLY*WWSFAVTSGRQT**PATE*SQRRNRPPTTVLPV*NHP* TTLTSI*NHDITFAQHEDHSRGAFPYFSFKANLFY NLARKPIYVATKP LAPINALN Subject 10330 YQLQEYNH*PQMGKSRLC*KWFQNLYLLPYLTKRGITLS*DLY*WWSFAVTSGRQT**PATE*SQRRNRPPTTVLPV*NHP*ITTLTSI*NHDITFAQHEDHSRGAFPYFSFKANLFYPNLARKPIYVATKPHLAPINALN 10752
Range 2: 10331 to 10750 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
320.4 bits(693) | 0.0 | 137/140(98%) | 0/140(0%) | Plus/Minus |
Query 3 PATGVQPLTPDGEKQIVLKVVPKSIPTSISN*KRNHTVLRPVLMVELCCNLGTTNVITSNRIITKTKSTTNNSIACLKSSINNYAYFNIKSRYYLRSARRSFTWRLPLFLF*GELVLFQSRTKTYLCRY*TSPSADKRTQ 422 PATGVQPLTPDGEKQIVLKVVPKSIPTSISN*KRNHTVLRPVLMVELCCNLGTTNVITSNRIITKTKSTTNNSIACLKSSINNYAYFNIKSRY+LRSARRSF WRLPLFLF*GELVL QSRTKTYLCRY*TSPSADKRTQ Subject 10331 PATGVQPLTPDGEKQIVLKVVPKSIPTSISN*KRNHTVLRPVLMVELCCNLGTTNVITSNRIITKTKSTTNNSIACLKSSINNYAYFNIKSRYHLRSARRSFAWRLPLFLF*GELVLSQSRTKTYLCRY*TSPSADKRTQ 10750
Range 3: 10329 to 10751 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
306.7 bits(663) | 0.0 | 137/141(97%) | 0/141(0%) | Plus/Minus |
Query 2 TSYRSTTTDPRWGKADCAESGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRXXXXXXXHKDEIDHQQQYCLFKIIHKQLRLLQYKITILPSLSTKIIHVAPSPISLLRRTCSIPISHENLFMSLLNLA*RR*THST 424 TSYRSTTTDPRWGKADCAESGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRNNQQQNNHKDEIDHQQQYCLFKIIHK LRLLQYKITI PSLSTKII VAPSPISLLRRTCSIPISHENLFMSLLNL *RR*THST Subject 10329 TSYRSTTTDPRWGKADCAESGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRNNQQQNNHKDEIDHQQQYCLFKIIHK*LRLLQYKITISPSLSTKIIRVAPSPISLLRRTCSIPISHENLFMSLLNLT*RR*THST 10751
Range 4: 10330 to 10728 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
302.6 bits(654) | 0.0 | 129/133(97%) | 0/133(0%) | Minus/Plus |
Query 25 VECVYRR*ARFSSDINRFSCEIGIEQVRLKREIGEGAT*MIFVLSEGNIVILY*SKRSCLWMILNRQYCCWWSISSL*LFCCWLLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPLSAQSAFPHLGS 423 VECVYRR* RFSSDINRFSCEIGIEQVRLKREIGEGAT MIFVLSEG+IVILY*SKRS LWMILNRQYCCWWSISSL*LFCCWLLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPLSAQSAFPHLGS Subject 10330 VECVYRR*VRFSSDINRFSCEIGIEQVRLKREIGEGATRMIFVLSEGDIVILY*SKRSYLWMILNRQYCCWWSISSL*LFCCWLLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPLSAQSAFPHLGS 10728
Range 5: 10547 to 10750 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
181.1 bits(389) | 0.0 | 68/68(100%) | 0/68(0%) | Minus/Plus |
Query 3 RFRLCDYSVAGYYVCRPEVTAKLHH*YRS*DSVIPLLVRYGSRYRFWNHFQHNLLFPIWGQWLYSCSW 206 RFRLCDYSVAGYYVCRPEVTAKLHH*YRS*DSVIPLLVRYGSRYRFWNHFQHNLLFPIWGQWLYSCSW Subject 10547 RFRLCDYSVAGYYVCRPEVTAKLHH*YRS*DSVIPLLVRYGSRYRFWNHFQHNLLFPIWGQWLYSCSW 10750
Range 6: 10332 to 10529 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
140.8 bits(301) | 0.0 | 64/66(97%) | 0/66(0%) | Minus/Plus |
Query 224 *VRLSALGEV**RHK*VFVRDWNRTSSP*KRNRGRRHVNDLRAERR*YRDFILK*A*LFMDDFKQA 421 *VRLSALGEV**RHK*VFVRDW+RTSSP*KRNRGRRH NDLRAERR*YRDFILK*A*LFMDDFKQA Subject 10332 *VRLSALGEV**RHK*VFVRDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*A*LFMDDFKQA 10529
Range 7: 10596 to 10751 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.0 bits(262) | 0.0 | 52/52(100%) | 0/52(0%) | Minus/Plus |
Query 2 PRLQQSSTINTGLRTV*FLF*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAG 157 PRLQQSSTINTGLRTV*FLF*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAG Subject 10596 PRLQQSSTINTGLRTV*FLF*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAG 10751
Range 8: 10331 to 10498 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
110.1 bits(234) | 0.0 | 54/56(96%) | 0/56(0%) | Minus/Plus |
Query 255 LSAFIGARRGLVAT*IGFRARLE*NKFALKEK*GKAPRE*SSC*AKVIS*FYIEVS 422 LSAFIGAR GLVAT*IGFRARL *NKFALKEK*GKAPRE*SSC*AKVIS*FYIEVS Subject 10331 LSAFIGAR*GLVAT*IGFRARLG*NKFALKEK*GKAPRE*SSC*AKVIS*FYIEVS 10498
Grapevine leafroll associated virus 3 isolate TC BR, complete genome
Sequence ID: KX756668.1 Length: 18498 Number of Matches: 8
Range 1: 10330 to 10752 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
326.4 bits(706) | 0.0 | 138/141(98%) | 0/141(0%) | Plus/Minus |
Query 1 YQLQEYNH*PQMGKSRLC*KWFQNLYLLPYLTKRGITLS*DLY*WWSFAVTSGRQT**PATE*SQRRNRPPTTVLPV*NHP*TTTLTSI*NHDITFAQHEDHSRGAFPYFSFKANLFYSNLARKPIYVATKPRLAPINALN 423 YQLQEYNH*PQMGKSRLC*KWFQNLYLLPYLTKRGITLS*DLY*WWSFAVTSGRQT**PATE*SQRRNRPPTTVLPV*NHP* TTLTSI*NHDITFAQHEDHSRGAFPYFSFKANLFY NLARKPIYVATKP LAPINALN Subject 10330 YQLQEYNH*PQMGKSRLC*KWFQNLYLLPYLTKRGITLS*DLY*WWSFAVTSGRQT**PATE*SQRRNRPPTTVLPV*NHP*ITTLTSI*NHDITFAQHEDHSRGAFPYFSFKANLFYPNLARKPIYVATKPHLAPINALN 10752
Range 2: 10331 to 10750 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
320.4 bits(693) | 0.0 | 137/140(98%) | 0/140(0%) | Plus/Minus |
Query 3 PATGVQPLTPDGEKQIVLKVVPKSIPTSISN*KRNHTVLRPVLMVELCCNLGTTNVITSNRIITKTKSTTNNSIACLKSSINNYAYFNIKSRYYLRSARRSFTWRLPLFLF*GELVLFQSRTKTYLCRY*TSPSADKRTQ 422 PATGVQPLTPDGEKQIVLKVVPKSIPTSISN*KRNHTVLRPVLMVELCCNLGTTNVITSNRIITKTKSTTNNSIACLKSSINNYAYFNIKSRY+LRSARRSF WRLPLFLF*GELVL QSRTKTYLCRY*TSPSADKRTQ Subject 10331 PATGVQPLTPDGEKQIVLKVVPKSIPTSISN*KRNHTVLRPVLMVELCCNLGTTNVITSNRIITKTKSTTNNSIACLKSSINNYAYFNIKSRYHLRSARRSFAWRLPLFLF*GELVLSQSRTKTYLCRY*TSPSADKRTQ 10750
Range 3: 10329 to 10751 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
306.7 bits(663) | 0.0 | 137/141(97%) | 0/141(0%) | Plus/Minus |
Query 2 TSYRSTTTDPRWGKADCAESGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRXXXXXXXHKDEIDHQQQYCLFKIIHKQLRLLQYKITILPSLSTKIIHVAPSPISLLRRTCSIPISHENLFMSLLNLA*RR*THST 424 TSYRSTTTDPRWGKADCAESGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRNNQQQNNHKDEIDHQQQYCLFKIIHK LRLLQYKITI PSLSTKII VAPSPISLLRRTCSIPISHENLFMSLLNL *RR*THST Subject 10329 TSYRSTTTDPRWGKADCAESGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRNNQQQNNHKDEIDHQQQYCLFKIIHK*LRLLQYKITISPSLSTKIIRVAPSPISLLRRTCSIPISHENLFMSLLNLT*RR*THST 10751
Range 4: 10330 to 10728 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
302.6 bits(654) | 0.0 | 129/133(97%) | 0/133(0%) | Minus/Plus |
Query 25 VECVYRR*ARFSSDINRFSCEIGIEQVRLKREIGEGAT*MIFVLSEGNIVILY*SKRSCLWMILNRQYCCWWSISSL*LFCCWLLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPLSAQSAFPHLGS 423 VECVYRR* RFSSDINRFSCEIGIEQVRLKREIGEGAT MIFVLSEG+IVILY*SKRS LWMILNRQYCCWWSISSL*LFCCWLLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPLSAQSAFPHLGS Subject 10330 VECVYRR*VRFSSDINRFSCEIGIEQVRLKREIGEGATRMIFVLSEGDIVILY*SKRSYLWMILNRQYCCWWSISSL*LFCCWLLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPLSAQSAFPHLGS 10728
Range 5: 10547 to 10750 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
181.1 bits(389) | 0.0 | 68/68(100%) | 0/68(0%) | Minus/Plus |
Query 3 RFRLCDYSVAGYYVCRPEVTAKLHH*YRS*DSVIPLLVRYGSRYRFWNHFQHNLLFPIWGQWLYSCSW 206 RFRLCDYSVAGYYVCRPEVTAKLHH*YRS*DSVIPLLVRYGSRYRFWNHFQHNLLFPIWGQWLYSCSW Subject 10547 RFRLCDYSVAGYYVCRPEVTAKLHH*YRS*DSVIPLLVRYGSRYRFWNHFQHNLLFPIWGQWLYSCSW 10750
Range 6: 10332 to 10529 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
140.8 bits(301) | 0.0 | 64/66(97%) | 0/66(0%) | Minus/Plus |
Query 224 *VRLSALGEV**RHK*VFVRDWNRTSSP*KRNRGRRHVNDLRAERR*YRDFILK*A*LFMDDFKQA 421 *VRLSALGEV**RHK*VFVRDW+RTSSP*KRNRGRRH NDLRAERR*YRDFILK*A*LFMDDFKQA Subject 10332 *VRLSALGEV**RHK*VFVRDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*A*LFMDDFKQA 10529
Range 7: 10596 to 10751 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.0 bits(262) | 0.0 | 52/52(100%) | 0/52(0%) | Minus/Plus |
Query 2 PRLQQSSTINTGLRTV*FLF*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAG 157 PRLQQSSTINTGLRTV*FLF*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAG Subject 10596 PRLQQSSTINTGLRTV*FLF*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAG 10751
Range 8: 10331 to 10498 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
110.1 bits(234) | 0.0 | 54/56(96%) | 0/56(0%) | Minus/Plus |
Query 255 LSAFIGARRGLVAT*IGFRARLE*NKFALKEK*GKAPRE*SSC*AKVIS*FYIEVS 422 LSAFIGAR GLVAT*IGFRARL *NKFALKEK*GKAPRE*SSC*AKVIS*FYIEVS Subject 10331 LSAFIGAR*GLVAT*IGFRARLG*NKFALKEK*GKAPRE*SSC*AKVIS*FYIEVS 10498
Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome
Sequence ID: KX701860.1 Length: 18020 Number of Matches: 8
Range 1: 9848 to 10270 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
325.0 bits(703) | 0.0 | 137/141(97%) | 0/141(0%) | Plus/Minus |
Query 1 YQLQEYNH*PQMGKSRLC*KWFQNLYLLPYLTKRGITLS*DLY*WWSFAVTSGRQT**PATE*SQRRNRPPTTVLPV*NHP*TTTLTSI*NHDITFAQHEDHSRGAFPYFSFKANLFYSNLARKPIYVATKPRLAPINALN 423 YQLQEYNH*PQMGKSRLC*KWFQNLYLLPYLTKRGITLS*DLY*WW FAVTSGRQT**PATE*SQRRNRPPTTVLP *NHP*TTTLTSI*NHDITFAQHEDHSRGAFPYFSFKANLFY NLARKPIYVATKP LAPINALN Subject 9848 YQLQEYNH*PQMGKSRLC*KWFQNLYLLPYLTKRGITLS*DLY*WWCFAVTSGRQT**PATE*SQRRNRPPTTVLPA*NHP*TTTLTSI*NHDITFAQHEDHSRGAFPYFSFKANLFYPNLARKPIYVATKPHLAPINALN 10270
Range 2: 9849 to 10268 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
316.8 bits(685) | 0.0 | 136/140(97%) | 0/140(0%) | Plus/Minus |
Query 3 PATGVQPLTPDGEKQIVLKVVPKSIPTSISN*KRNHTVLRPVLMVELCCNLGTTNVITSNRIITKTKSTTNNSIACLKSSINNYAYFNIKSRYYLRSARRSFTWRLPLFLF*GELVLFQSRTKTYLCRY*TSPSADKRTQ 422 PATGVQPLTPDGEKQIVLKVVPKSIPTSISN*KRNHTVLRPVLMV LCCNLGTTNVITSNRIITKTKSTTNNSIACLKSSINNYAYFNIKSRYYLRSARRS WRLPLFLF*GELVL QSRTKTYLCRY*TSPSADKRTQ Subject 9849 PATGVQPLTPDGEKQIVLKVVPKSIPTSISN*KRNHTVLRPVLMVVLCCNLGTTNVITSNRIITKTKSTTNNSIACLKSSINNYAYFNIKSRYYLRSARRSLAWRLPLFLF*GELVLSQSRTKTYLCRY*TSPSADKRTQ 10268
Range 3: 9847 to 10269 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
308.5 bits(667) | 0.0 | 137/141(97%) | 0/141(0%) | Plus/Minus |
Query 2 TSYRSTTTDPRWGKADCAESGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRXXXXXXXHKDEIDHQQQYCLFKIIHKQLRLLQYKITILPSLSTKIIHVAPSPISLLRRTCSIPISHENLFMSLLNLA*RR*THST 424 TSYRSTTTDPRWGKADCAESGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRNNQQQNNHKDEIDHQQQYCL KIIHKQLRLLQYKITILPSLSTKI VAPSPISLLRRTCSIPISHENLFMSLLNL *RR*THST Subject 9847 TSYRSTTTDPRWGKADCAESGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRNNQQQNNHKDEIDHQQQYCLLKIIHKQLRLLQYKITILPSLSTKITRVAPSPISLLRRTCSIPISHENLFMSLLNLT*RR*THST 10269
Range 4: 9848 to 10246 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
305.8 bits(661) | 0.0 | 129/133(97%) | 0/133(0%) | Minus/Plus |
Query 25 VECVYRR*ARFSSDINRFSCEIGIEQVRLKREIGEGAT*MIFVLSEGNIVILY*SKRSCLWMILNRQYCCWWSISSL*LFCCWLLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPLSAQSAFPHLGS 423 VECVYRR* RFSSDINRFSCEIGIEQVRLKREIGEGAT +IFVLSEGNIVILY*SKRSCLWMIL+RQYCCWWSISSL*LFCCWLLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPLSAQSAFPHLGS Subject 9848 VECVYRR*VRFSSDINRFSCEIGIEQVRLKREIGEGATRVIFVLSEGNIVILY*SKRSCLWMILSRQYCCWWSISSL*LFCCWLLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPLSAQSAFPHLGS 10246
Range 5: 10065 to 10268 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
177.9 bits(382) | 0.0 | 67/68(99%) | 0/68(0%) | Minus/Plus |
Query 3 RFRLCDYSVAGYYVCRPEVTAKLHH*YRS*DSVIPLLVRYGSRYRFWNHFQHNLLFPIWGQWLYSCSW 206 RFRLCDYSVAGYYVCRPEVTAK HH*YRS*DSVIPLLVRYGSRYRFWNHFQHNLLFPIWGQWLYSCSW Subject 10065 RFRLCDYSVAGYYVCRPEVTAKHHH*YRS*DSVIPLLVRYGSRYRFWNHFQHNLLFPIWGQWLYSCSW 10268
Range 6: 9850 to 10047 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
138.5 bits(296) | 0.0 | 63/66(95%) | 0/66(0%) | Minus/Plus |
Query 224 *VRLSALGEV**RHK*VFVRDWNRTSSP*KRNRGRRHVNDLRAERR*YRDFILK*A*LFMDDFKQA 421 *VRLSALGEV**RHK*VFVRDW+RTSSP*KRNRGRRH +DLRAERR*YRDFILK*A*LFMDDFKQA Subject 9850 *VRLSALGEV**RHK*VFVRDWDRTSSP*KRNRGRRHASDLRAERR*YRDFILK*A*LFMDDFKQA 10047
Range 7: 10114 to 10269 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
121.6 bits(259) | 0.0 | 51/52(98%) | 0/52(0%) | Minus/Plus |
Query 2 PRLQQSSTINTGLRTV*FLF*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAG 157 PRLQQS+TINTGLRTV*FLF*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAG Subject 10114 PRLQQSTTINTGLRTV*FLF*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAG 10269
Range 8: 9849 to 10016 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
110.1 bits(234) | 0.0 | 54/56(96%) | 0/56(0%) | Minus/Plus |
Query 255 LSAFIGARRGLVAT*IGFRARLE*NKFALKEK*GKAPRE*SSC*AKVIS*FYIEVS 422 LSAFIGAR GLVAT*IGFRARL *NKFALKEK*GKAPRE*SSC*AKVIS*FYIEVS Subject 9849 LSAFIGAR*GLVAT*IGFRARLG*NKFALKEK*GKAPRE*SSC*AKVIS*FYIEVS 10016
Grapevine leafroll associated virus 3 isolate GP18, complete genome
Sequence ID: EU259806.1 Length: 18498 Number of Matches: 8
Range 1: 10330 to 10752 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
322.3 bits(697) | 0.0 | 136/141(96%) | 0/141(0%) | Plus/Minus |
Query 1 YQLQEYNH*PQMGKSRLC*KWFQNLYLLPYLTKRGITLS*DLY*WWSFAVTSGRQT**PATE*SQRRNRPPTTVLPV*NHP*TTTLTSI*NHDITFAQHEDHSRGAFPYFSFKANLFYSNLARKPIYVATKPRLAPINALN 423 YQLQ YNH*PQMGKSRLC*KWFQNLYLLPYLTKRGITLS*DLY*WWSFAVTSGRQT**PATE*SQRRNRPPTTVLPV*NHP* TTLTSI*NHDITFAQHEDHSRGAFPYFSFKAN+FY NLARKPIYVATKP LAPINALN Subject 10330 YQLQGYNH*PQMGKSRLC*KWFQNLYLLPYLTKRGITLS*DLY*WWSFAVTSGRQT**PATE*SQRRNRPPTTVLPV*NHP*ITTLTSI*NHDITFAQHEDHSRGAFPYFSFKANMFYPNLARKPIYVATKPHLAPINALN 10752
Range 2: 10331 to 10750 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
314.5 bits(680) | 0.0 | 135/140(96%) | 0/140(0%) | Plus/Minus |
Query 3 PATGVQPLTPDGEKQIVLKVVPKSIPTSISN*KRNHTVLRPVLMVELCCNLGTTNVITSNRIITKTKSTTNNSIACLKSSINNYAYFNIKSRYYLRSARRSFTWRLPLFLF*GELVLFQSRTKTYLCRY*TSPSADKRTQ 422 PATGVQPLTPDGEKQIVLKVVPKSIPTSISN*KRNHTVLRPVLMVELCCNLGTTNVITSNRIITKTKSTTNNSIACLKSSINNYAYFNIKSRY+LRSARRSF WRLPLFLF*GE VL QS TKTYLCRY*TSPSADKRTQ Subject 10331 PATGVQPLTPDGEKQIVLKVVPKSIPTSISN*KRNHTVLRPVLMVELCCNLGTTNVITSNRIITKTKSTTNNSIACLKSSINNYAYFNIKSRYHLRSARRSFAWRLPLFLF*GEHVLSQSSTKTYLCRY*TSPSADKRTQ 10750
Range 3: 10329 to 10751 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
301.2 bits(651) | 0.0 | 135/141(96%) | 0/141(0%) | Plus/Minus |
Query 2 TSYRSTTTDPRWGKADCAESGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRXXXXXXXHKDEIDHQQQYCLFKIIHKQLRLLQYKITILPSLSTKIIHVAPSPISLLRRTCSIPISHENLFMSLLNLA*RR*THST 424 TSYR TTTDPRWGKADCAESGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRNNQQQNNHKDEIDHQQQYCLFKIIHK LRLLQYKITI PSLSTKII VAPSPISLLRRTCSIPI HENLFMSLLNL *RR*THST Subject 10329 TSYRGTTTDPRWGKADCAESGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRNNQQQNNHKDEIDHQQQYCLFKIIHK*LRLLQYKITISPSLSTKIIRVAPSPISLLRRTCSIPI*HENLFMSLLNLT*RR*THST 10751
Range 4: 10330 to 10728 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
296.2 bits(640) | 0.0 | 127/133(95%) | 0/133(0%) | Minus/Plus |
Query 25 VECVYRR*ARFSSDINRFSCEIGIEQVRLKREIGEGAT*MIFVLSEGNIVILY*SKRSCLWMILNRQYCCWWSISSL*LFCCWLLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPLSAQSAFPHLGS 423 VECVYRR* RFSSDINRFSC IGIE VRLKREIGEGAT MIFVLSEG+IVILY*SKRS LWMILNRQYCCWWSISSL*LFCCWLLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPLSAQSAFPHLGS Subject 10330 VECVYRR*VRFSSDINRFSC*IGIEHVRLKREIGEGATRMIFVLSEGDIVILY*SKRSYLWMILNRQYCCWWSISSL*LFCCWLLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPLSAQSAFPHLGS 10728
Range 5: 10547 to 10750 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
178.9 bits(384) | 0.0 | 67/68(99%) | 0/68(0%) | Minus/Plus |
Query 3 RFRLCDYSVAGYYVCRPEVTAKLHH*YRS*DSVIPLLVRYGSRYRFWNHFQHNLLFPIWGQWLYSCSW 206 RFRLCDYSVAGYYVCRPEVTAKLHH*YRS*DSVIPLLVRYGSRYRFWNHFQHNLLFPIWGQWLY CSW Subject 10547 RFRLCDYSVAGYYVCRPEVTAKLHH*YRS*DSVIPLLVRYGSRYRFWNHFQHNLLFPIWGQWLYPCSW 10750
Range 6: 10332 to 10529 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
135.3 bits(289) | 0.0 | 62/66(94%) | 0/66(0%) | Minus/Plus |
Query 224 *VRLSALGEV**RHK*VFVRDWNRTSSP*KRNRGRRHVNDLRAERR*YRDFILK*A*LFMDDFKQA 421 *VRLSALGEV**RHK*VFV DW+RT SP*KRNRGRRH NDLRAERR*YRDFILK*A*LFMDDFKQA Subject 10332 *VRLSALGEV**RHK*VFVLDWDRTCSP*KRNRGRRHANDLRAERR*YRDFILK*A*LFMDDFKQA 10529
Range 7: 10596 to 10751 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.0 bits(262) | 0.0 | 52/52(100%) | 0/52(0%) | Minus/Plus |
Query 2 PRLQQSSTINTGLRTV*FLF*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAG 157 PRLQQSSTINTGLRTV*FLF*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAG Subject 10596 PRLQQSSTINTGLRTV*FLF*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAG 10751
Range 8: 10331 to 10498 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
107.4 bits(228) | 0.0 | 53/56(95%) | 0/56(0%) | Minus/Plus |
Query 255 LSAFIGARRGLVAT*IGFRARLE*NKFALKEK*GKAPRE*SSC*AKVIS*FYIEVS 422 LSAFIGAR GLVAT*IGFRARL *N FALKEK*GKAPRE*SSC*AKVIS*FYIEVS Subject 10331 LSAFIGAR*GLVAT*IGFRARLG*NMFALKEK*GKAPRE*SSC*AKVIS*FYIEVS 10498
Nucleotide Sequence (243 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
195.8 | 1129.8 | 34% | 8.521e-49 | 100% | JX559645.1 | |
195.8 | 1129.8 | 34% | 8.521e-49 | 100% | GU983863.1 | |
195.8 | 1129.8 | 34% | 8.521e-49 | 100% | EU344893.1 | |
194.0 | 1122.0 | 34% | 3.035e-48 | 99% | KX756669.1 | |
192.6 | 1118.4 | 34% | 7.871e-48 | 99% | GQ352631.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 6
Range 1: 12045 to 12284 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
195.8 bits(421) | 0.0 | 80/80(100%) | 0/80(0%) | Plus/Minus |
Query 2 GGF*KIFFYP*IREPLIFVTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPRFIDQ*IQYVCCPGYQIFILYFLTINDNRH 241 GGF*KIFFYP*IREPLIFVTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPRFIDQ*IQYVCCPGYQIFILYFLTINDNRH Subject 12045 GGF*KIFFYP*IREPLIFVTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPRFIDQ*IQYVCCPGYQIFILYFLTINDNRH 12284
Range 2: 12043 to 12285 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
192.6 bits(414) | 0.0 | 81/81(100%) | 0/81(0%) | Plus/Minus |
Query 1 RRILKNFLLSLNPRTPYLCYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTP 243 RRILKNFLLSLNPRTPYLCYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTP Subject 12043 RRILKNFLLSLNPRTPYLCYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTP 12285
Range 3: 12043 to 12285 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
189.4 bits(407) | 0.0 | 81/81(100%) | 0/81(0%) | Minus/Plus |
Query 1 RCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VTKIRGSRI*G*KKIF*NPP 243 RCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VTKIRGSRI*G*KKIF*NPP Subject 12043 RCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VTKIRGSRI*G*KKIF*NPP 12285
Range 4: 12044 to 12283 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
188.5 bits(405) | 0.0 | 80/80(100%) | 0/80(0%) | Minus/Plus |
Query 3 GVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*QR*GVLGFKDRRKFFKIR 242 GVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*QR*GVLGFKDRRKFFKIR Subject 12044 GVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*QR*GVLGFKDRRKFFKIR 12283
Range 5: 12045 to 12284 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
182.9 bits(401) | 0.0 | 80/80(100%) | 0/80(0%) | Minus/Plus |
Query 2 VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSNKDKGFSDLRIEENFLKSA 241 VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSNKDKGFSDLRIEENFLKSA Subject 12045 VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSNKDKGFSDLRIEENFLKSA 12284
Range 6: 12044 to 12283 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
180.7 bits(388) | 0.0 | 80/80(100%) | 0/80(0%) | Plus/Minus |
Query 3 ADFKKFSSILKSENPLSLLLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDT 242 ADFKKFSSILKSENPLSLLLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDT Subject 12044 ADFKKFSSILKSENPLSLLLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDT 12283
Grapevine leafroll associated virus 3 isolate WA MR, complete genome
Sequence ID: GU983863.1 Length: 18498 Number of Matches: 6
Range 1: 12045 to 12284 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
195.8 bits(421) | 0.0 | 80/80(100%) | 0/80(0%) | Plus/Minus |
Query 2 GGF*KIFFYP*IREPLIFVTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPRFIDQ*IQYVCCPGYQIFILYFLTINDNRH 241 GGF*KIFFYP*IREPLIFVTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPRFIDQ*IQYVCCPGYQIFILYFLTINDNRH Subject 12045 GGF*KIFFYP*IREPLIFVTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPRFIDQ*IQYVCCPGYQIFILYFLTINDNRH 12284
Range 2: 12043 to 12285 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
192.6 bits(414) | 0.0 | 81/81(100%) | 0/81(0%) | Plus/Minus |
Query 1 RRILKNFLLSLNPRTPYLCYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTP 243 RRILKNFLLSLNPRTPYLCYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTP Subject 12043 RRILKNFLLSLNPRTPYLCYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTP 12285
Range 3: 12043 to 12285 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
189.4 bits(407) | 0.0 | 81/81(100%) | 0/81(0%) | Minus/Plus |
Query 1 RCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VTKIRGSRI*G*KKIF*NPP 243 RCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VTKIRGSRI*G*KKIF*NPP Subject 12043 RCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VTKIRGSRI*G*KKIF*NPP 12285
Range 4: 12044 to 12283 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
188.5 bits(405) | 0.0 | 80/80(100%) | 0/80(0%) | Minus/Plus |
Query 3 GVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*QR*GVLGFKDRRKFFKIR 242 GVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*QR*GVLGFKDRRKFFKIR Subject 12044 GVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*QR*GVLGFKDRRKFFKIR 12283
Range 5: 12045 to 12284 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
182.9 bits(401) | 0.0 | 80/80(100%) | 0/80(0%) | Minus/Plus |
Query 2 VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSNKDKGFSDLRIEENFLKSA 241 VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSNKDKGFSDLRIEENFLKSA Subject 12045 VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSNKDKGFSDLRIEENFLKSA 12284
Range 6: 12044 to 12283 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
180.7 bits(388) | 0.0 | 80/80(100%) | 0/80(0%) | Plus/Minus |
Query 3 ADFKKFSSILKSENPLSLLLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDT 242 ADFKKFSSILKSENPLSLLLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDT Subject 12044 ADFKKFSSILKSENPLSLLLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDT 12283
Grapevine leafroll associated virus 3 isolate Cl 766, complete genome
Sequence ID: EU344893.1 Length: 17919 Number of Matches: 6
Range 1: 11466 to 11705 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
195.8 bits(421) | 0.0 | 80/80(100%) | 0/80(0%) | Plus/Minus |
Query 2 GGF*KIFFYP*IREPLIFVTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPRFIDQ*IQYVCCPGYQIFILYFLTINDNRH 241 GGF*KIFFYP*IREPLIFVTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPRFIDQ*IQYVCCPGYQIFILYFLTINDNRH Subject 11466 GGF*KIFFYP*IREPLIFVTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPRFIDQ*IQYVCCPGYQIFILYFLTINDNRH 11705
Range 2: 11464 to 11706 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
192.6 bits(414) | 0.0 | 81/81(100%) | 0/81(0%) | Plus/Minus |
Query 1 RRILKNFLLSLNPRTPYLCYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTP 243 RRILKNFLLSLNPRTPYLCYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTP Subject 11464 RRILKNFLLSLNPRTPYLCYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTP 11706
Range 3: 11464 to 11706 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
189.4 bits(407) | 0.0 | 81/81(100%) | 0/81(0%) | Minus/Plus |
Query 1 RCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VTKIRGSRI*G*KKIF*NPP 243 RCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VTKIRGSRI*G*KKIF*NPP Subject 11464 RCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VTKIRGSRI*G*KKIF*NPP 11706
Range 4: 11465 to 11704 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
188.5 bits(405) | 0.0 | 80/80(100%) | 0/80(0%) | Minus/Plus |
Query 3 GVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*QR*GVLGFKDRRKFFKIR 242 GVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*QR*GVLGFKDRRKFFKIR Subject 11465 GVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*QR*GVLGFKDRRKFFKIR 11704
Range 5: 11466 to 11705 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
182.9 bits(401) | 0.0 | 80/80(100%) | 0/80(0%) | Minus/Plus |
Query 2 VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSNKDKGFSDLRIEENFLKSA 241 VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSNKDKGFSDLRIEENFLKSA Subject 11466 VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSNKDKGFSDLRIEENFLKSA 11705
Range 6: 11465 to 11704 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
180.7 bits(388) | 0.0 | 80/80(100%) | 0/80(0%) | Plus/Minus |
Query 3 ADFKKFSSILKSENPLSLLLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDT 242 ADFKKFSSILKSENPLSLLLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDT Subject 11465 ADFKKFSSILKSENPLSLLLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDT 11704
Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome
Sequence ID: KX756669.1 Length: 18313 Number of Matches: 6
Range 1: 11860 to 12099 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.0 bits(417) | 0.0 | 79/80(99%) | 0/80(0%) | Plus/Minus |
Query 2 GGF*KIFFYP*IREPLIFVTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPRFIDQ*IQYVCCPGYQIFILYFLTINDNRH 241 GGF*KIFFYP*IREPLIFVTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPRFIDQ*IQYVCCPGYQIFI YFLTINDNRH Subject 11860 GGF*KIFFYP*IREPLIFVTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPRFIDQ*IQYVCCPGYQIFIFYFLTINDNRH 12099
Range 2: 11858 to 12100 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
189.8 bits(408) | 0.0 | 80/81(99%) | 0/81(0%) | Plus/Minus |
Query 1 RRILKNFLLSLNPRTPYLCYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTP 243 RRILKNFLLSLNPRTPYLCYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSQIYRPMNPVRLLSRVPDIH LLPHH*R*QTP Subject 11858 RRILKNFLLSLNPRTPYLCYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSQIYRPMNPVRLLSRVPDIHFLLPHH*R*QTP 12100
Range 3: 11858 to 12100 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
188.0 bits(404) | 0.0 | 80/81(99%) | 0/81(0%) | Minus/Plus |
Query 1 RCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VTKIRGSRI*G*KKIF*NPP 243 RCLLSLMVRK*+MNIWYPGQQTYWIHWSINLGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VTKIRGSRI*G*KKIF*NPP Subject 11858 RCLLSLMVRK*KMNIWYPGQQTYWIHWSINLGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VTKIRGSRI*G*KKIF*NPP 12100
Range 4: 11859 to 12098 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
186.6 bits(401) | 0.0 | 79/80(99%) | 0/80(0%) | Minus/Plus |
Query 3 GVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*QR*GVLGFKDRRKFFKIR 242 GVCYR*W*GSK+*ISGTRDNKRTGFIGL*IWERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*QR*GVLGFKDRRKFFKIR Subject 11859 GVCYR*W*GSKK*ISGTRDNKRTGFIGL*IWERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*QR*GVLGFKDRRKFFKIR 12098
Range 5: 11860 to 12099 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
182.9 bits(401) | 0.0 | 80/80(100%) | 0/80(0%) | Minus/Plus |
Query 2 VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSNKDKGFSDLRIEENFLKSA 241 VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSNKDKGFSDLRIEENFLKSA Subject 11860 VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSNKDKGFSDLRIEENFLKSA 12099
Range 6: 11859 to 12098 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
180.7 bits(388) | 0.0 | 80/80(100%) | 0/80(0%) | Plus/Minus |
Query 3 ADFKKFSSILKSENPLSLLLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDT 242 ADFKKFSSILKSENPLSLLLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDT Subject 11859 ADFKKFSSILKSENPLSLLLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDT 12098
Grapevine leafroll associated virus 3 isolate 621, complete genome
Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 6
Range 1: 12043 to 12285 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
192.6 bits(414) | 0.0 | 81/81(100%) | 0/81(0%) | Plus/Minus |
Query 1 RRILKNFLLSLNPRTPYLCYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTP 243 RRILKNFLLSLNPRTPYLCYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTP Subject 12043 RRILKNFLLSLNPRTPYLCYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTP 12285
Range 2: 12045 to 12284 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
191.2 bits(411) | 0.0 | 79/80(99%) | 0/80(0%) | Plus/Minus |
Query 2 GGF*KIFFYP*IREPLIFVTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPRFIDQ*IQYVCCPGYQIFILYFLTINDNRH 241 GGF*KIFFY *IREPLIFVTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPRFIDQ*IQYVCCPGYQIFILYFLTINDNRH Subject 12045 GGF*KIFFYL*IREPLIFVTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPRFIDQ*IQYVCCPGYQIFILYFLTINDNRH 12284
Range 3: 12044 to 12283 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
188.5 bits(405) | 0.0 | 80/80(100%) | 0/80(0%) | Minus/Plus |
Query 3 GVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*QR*GVLGFKDRRKFFKIR 242 GVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*QR*GVLGFKDRRKFFKIR Subject 12044 GVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWERRFRG*GNTRVLDHTEYFAR*GFHEEKPE*QR*GVLGFKDRRKFFKIR 12283
Range 4: 12043 to 12285 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
185.7 bits(399) | 0.0 | 80/81(99%) | 0/81(0%) | Minus/Plus |
Query 1 RCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VTKIRGSRI*G*KKIF*NPP 243 RCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VTKIRGSRI* *KKIF*NPP Subject 12043 RCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VTKIRGSRI*R*KKIF*NPP 12285
Range 5: 12045 to 12284 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
181.5 bits(398) | 0.0 | 79/80(99%) | 0/80(0%) | Minus/Plus |
Query 2 VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSNKDKGFSDLRIEENFLKSA 241 VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSNKDKGFSDL+IEENFLKSA Subject 12045 VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSNKDKGFSDLKIEENFLKSA 12284
Range 6: 12044 to 12283 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
178.9 bits(384) | 0.0 | 79/80(99%) | 0/80(0%) | Plus/Minus |
Query 3 ADFKKFSSILKSENPLSLLLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDT 242 ADFKKFSSI KSENPLSLLLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDT Subject 12044 ADFKKFSSIFKSENPLSLLLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDT 12283
Nucleotide Sequence (220 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
75.8 | 360.4 | 30% | 2.285e-32 | 95% | JX559645.1 | |
75.8 | 360.4 | 30% | 2.285e-32 | 95% | GQ352631.1 | |
75.8 | 360.4 | 30% | 2.285e-32 | 95% | GU983863.1 | |
75.8 | 360.4 | 30% | 2.286e-32 | 95% | KX756669.1 | |
73.5 | 73.5 | 16% | 4.165e-12 | 97% | NC_004667.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 7
Range 1: 579 to 686 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
75.8 bits(159) | 0.0 | 35/36(97%) | 0/36(0%) | Plus/Minus |
Query 3 RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*ELLR 110 RTTEEEGQTSLKQQENLKLEKERS*ILGRNS* LLR Subject 579 RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*VLLR 686
Range 2: 470 to 535 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.2 bits(109) | 0.0 | 21/22(95%) | 0/22(0%) | Plus/Minus |
Query 154 NIFKLVKENYEKTKNKALKEND 219 NIFKLVKENYEKT+NKALKEND Subject 470 NIFKLVKENYEKTENKALKEND 535
Range 3: 520 to 591 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.5 bits(106) | 0.0 | 23/24(96%) | 0/24(0%) | Plus/Minus |
Query 98 GVT*ENRKSEH*D*RKLKEIFLNL 169 GVT*ENRKS+H*D*RKLKEIFLNL Subject 520 GVT*ENRKSKH*D*RKLKEIFLNL 591
Range 4: 469 to 534 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.8 bits(109) | 0.0 | 21/22(95%) | 0/22(0%) | Minus/Plus |
Query 155 RHFLLVLCFSFFRSFPSQV*KY 220 RHFLLVLCF FFRSFPSQV*KY Subject 469 RHFLLVLCFPFFRSFPSQV*KY 534
Range 5: 586 to 687 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
41.8 bits(85) | 0.0 | 33/34(97%) | 0/34(0%) | Minus/Plus |
Query 2 NS*EFLPKIQXXXXXXXXXXXXLREVCPSSSVVL 103 N+*EFLPKIQLLSFSSFKFSCCLREVCPSSSVVL Subject 586 NT*EFLPKIQLLSFSSFKFSCCLREVCPSSSVVL 687
Grapevine leafroll associated virus 3 isolate 621, complete genome
Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 7
Range 1: 579 to 686 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
75.8 bits(159) | 0.0 | 35/36(97%) | 0/36(0%) | Plus/Minus |
Query 3 RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*ELLR 110 RTTEEEGQTSLKQQENLKLEKERS*ILGRNS* LLR Subject 579 RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*VLLR 686
Range 2: 470 to 535 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.2 bits(109) | 0.0 | 21/22(95%) | 0/22(0%) | Plus/Minus |
Query 154 NIFKLVKENYEKTKNKALKEND 219 NIFKLVKENYEKT+NKALKEND Subject 470 NIFKLVKENYEKTENKALKEND 535
Range 3: 520 to 591 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.5 bits(106) | 0.0 | 23/24(96%) | 0/24(0%) | Plus/Minus |
Query 98 GVT*ENRKSEH*D*RKLKEIFLNL 169 GVT*ENRKS+H*D*RKLKEIFLNL Subject 520 GVT*ENRKSKH*D*RKLKEIFLNL 591
Range 4: 469 to 534 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.8 bits(109) | 0.0 | 21/22(95%) | 0/22(0%) | Minus/Plus |
Query 155 RHFLLVLCFSFFRSFPSQV*KY 220 RHFLLVLCF FFRSFPSQV*KY Subject 469 RHFLLVLCFPFFRSFPSQV*KY 534
Range 5: 586 to 687 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
41.8 bits(85) | 0.0 | 33/34(97%) | 0/34(0%) | Minus/Plus |
Query 2 NS*EFLPKIQXXXXXXXXXXXXLREVCPSSSVVL 103 N+*EFLPKIQLLSFSSFKFSCCLREVCPSSSVVL Subject 586 NT*EFLPKIQLLSFSSFKFSCCLREVCPSSSVVL 687
Grapevine leafroll associated virus 3 isolate WA MR, complete genome
Sequence ID: GU983863.1 Length: 18498 Number of Matches: 7
Range 1: 579 to 686 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
75.8 bits(159) | 0.0 | 35/36(97%) | 0/36(0%) | Plus/Minus |
Query 3 RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*ELLR 110 RTTEEEGQTSLKQQENLKLEKERS*ILGRNS* LLR Subject 579 RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*VLLR 686
Range 2: 470 to 535 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.2 bits(109) | 0.0 | 21/22(95%) | 0/22(0%) | Plus/Minus |
Query 154 NIFKLVKENYEKTKNKALKEND 219 NIFKLVKENYEKT+NKALKEND Subject 470 NIFKLVKENYEKTENKALKEND 535
Range 3: 520 to 591 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.5 bits(106) | 0.0 | 23/24(96%) | 0/24(0%) | Plus/Minus |
Query 98 GVT*ENRKSEH*D*RKLKEIFLNL 169 GVT*ENRKS+H*D*RKLKEIFLNL Subject 520 GVT*ENRKSKH*D*RKLKEIFLNL 591
Range 4: 469 to 534 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.8 bits(109) | 0.0 | 21/22(95%) | 0/22(0%) | Minus/Plus |
Query 155 RHFLLVLCFSFFRSFPSQV*KY 220 RHFLLVLCF FFRSFPSQV*KY Subject 469 RHFLLVLCFPFFRSFPSQV*KY 534
Range 5: 586 to 687 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
41.8 bits(85) | 0.0 | 33/34(97%) | 0/34(0%) | Minus/Plus |
Query 2 NS*EFLPKIQXXXXXXXXXXXXLREVCPSSSVVL 103 N+*EFLPKIQLLSFSSFKFSCCLREVCPSSSVVL Subject 586 NT*EFLPKIQLLSFSSFKFSCCLREVCPSSSVVL 687
Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome
Sequence ID: KX756669.1 Length: 18313 Number of Matches: 7
Range 1: 394 to 501 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
75.8 bits(159) | 0.0 | 35/36(97%) | 0/36(0%) | Plus/Minus |
Query 3 RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*ELLR 110 RTTEEEGQTSLKQQENLKLEKERS*ILGRNS* LLR Subject 394 RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*VLLR 501
Range 2: 285 to 350 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.2 bits(109) | 0.0 | 21/22(95%) | 0/22(0%) | Plus/Minus |
Query 154 NIFKLVKENYEKTKNKALKEND 219 NIFKLVKENYEKT+NKALKEND Subject 285 NIFKLVKENYEKTENKALKEND 350
Range 3: 335 to 406 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.5 bits(106) | 0.0 | 23/24(96%) | 0/24(0%) | Plus/Minus |
Query 98 GVT*ENRKSEH*D*RKLKEIFLNL 169 GVT*ENRKS+H*D*RKLKEIFLNL Subject 335 GVT*ENRKSKH*D*RKLKEIFLNL 406
Range 4: 284 to 349 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.8 bits(109) | 0.0 | 21/22(95%) | 0/22(0%) | Minus/Plus |
Query 155 RHFLLVLCFSFFRSFPSQV*KY 220 RHFLLVLCF FFRSFPSQV*KY Subject 284 RHFLLVLCFPFFRSFPSQV*KY 349
Range 5: 401 to 502 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
41.8 bits(85) | 0.0 | 33/34(97%) | 0/34(0%) | Minus/Plus |
Query 2 NS*EFLPKIQXXXXXXXXXXXXLREVCPSSSVVL 103 N+*EFLPKIQLLSFSSFKFSCCLREVCPSSSVVL Subject 401 NT*EFLPKIQLLSFSSFKFSCCLREVCPSSSVVL 502
Grapevine leafroll associated virus 3, complete genome
Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 1
Nucleotide Sequence (1025 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
479.0 | 4156.2 | 52% | 0 | 88% | KX756669.1 | |
476.7 | 4155.8 | 52% | 0 | 91% | EU344893.1 | |
475.3 | 4141.6 | 52% | 0 | 91% | JX559645.1 | |
479.4 | 4142.5 | 52% | 0 | 88% | GU983863.1 | |
476.7 | 4127.8 | 52% | 0 | 91% | GQ352631.1 |
Alignments
Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome
Sequence ID: KX756669.1 Length: 18313 Number of Matches: 23
Range 1: 17392 to 18009 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
479.0 bits(1039) | 0.0 | 203/206(99%) | 0/206(0%) | Minus/Minus |
Query 3 PFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQQTISTANKHAQISSDNCNPFENLTLAEQHNNFIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVCLLLQLRPVRPELASCIC*CIDHLSIQDIFCFPSFHDTLRITPST**PPEHLPNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA 620 PFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQ TISTANKHAQISSDNCNPFENLTLAEQHN FIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVCLLLQLRPVRPELASCIC*CIDHLSIQDIFCFPSFHDTLRITPST**PPEHLPNV*+NL*LCPPNTPLGHKRRRSLYCQ*ELFYA Subject 17392 PFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQLTISTANKHAQISSDNCNPFENLTLAEQHNIFIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVCLLLQLRPVRPELASCIC*CIDHLSIQDIFCFPSFHDTLRITPST**PPEHLPNV*SNL*LCPPNTPLGHKRRRSLYCQ*ELFYA 18009
Range 2: 18002 to 18313 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
239.8 bits(517) | 0.0 | 102/104(98%) | 0/104(0%) | Minus/Minus |
Query 614 DLTYCR*VSLVRGPPRSQTLIGFWRLLYYTNIISLSTLRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**FTDLPPF 925 DLTYCR*VSLVRGPPRSQTLIGFWRLLYYTNIISLSTLRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**F DLP F Subject 18002 DLTYCR*VSLVRGPPRSQTLIGFWRLLYYTNIISLSTLRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**FPDLPLF 18313
Range 3: 17391 to 18014 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
478.5 bits(1038) | 0.0 | 203/208(98%) | 0/208(0%) | Plus/Plus |
Query 2 LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEGADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL*NCYVVQPVSNFQTGYNYRYLFAHVC*RC*LFVVVEGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*KRGK 625 LHRTILIDSIDSAFAYDQVGCLVGIARGL+KHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEG DILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL* CYVVQPVSNFQTGYNYRYLFAHVC*RC*L VVVEGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*KRG+ Subject 17391 LHRTILIDSIDSAFAYDQVGCLVGIARGLIKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEGEDILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL*KCYVVQPVSNFQTGYNYRYLFAHVC*RC*LLVVVEGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*KRGR 18014
Range 4: 18003 to 18311 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
215.1 bits(463) | 0.0 | 101/103(98%) | 0/103(0%) | Plus/Plus |
Query 615 KGGRSVNY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*YNKRQNPIKVWDLGGPLTRLTYRQ*VR 923 K GRS NY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*YNKRQNPIKVWDLGGPLTRLTYRQ*VR Subject 18003 KRGRSGNY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*YNKRQNPIKVWDLGGPLTRLTYRQ*VR 18311
Range 5: 17391 to 18008 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
424.9 bits(921) | 0.0 | 202/206(98%) | 0/206(0%) | Minus/Minus |
Query 2 PFLHMLIRAYK**LXXXXXXXXXXXTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNNKQLAPLTNMRK*VAIIVTRLKI*HWLNNITIL*CSATKRQEQHPSDPEI*RELITTD*MIRS*YVCSFNCGQSGLS*HHVFVSALIT*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ 619 PFLHMLIRAYK**LINIPINVTPINTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNN QLAPLTNMRK*VAIIVTRLKI*HWLNNIT L*CSATKRQEQHPSDPEI*RELITTD*MIRS*YV SFNCGQSGLS*HHVFVSALIT*VSKISFASPLSTTHFE*LHRLDDLQNIFRMF QTSSYAHQTPHLVISEGGVYTVNENCSMQ Subject 17391 PFLHMLIRAYK**LINIPINVTPINTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNN*QLAPLTNMRK*VAIIVTRLKI*HWLNNITFL*CSATKRQEQHPSDPEI*RELITTD*MIRS*YVFSFNCGQSGLS*HHVFVSALIT*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFNQTSSYAHQTPHLVISEGGVYTVNENCSMQ 18008
Range 6: 18007 to 18312 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
222.8 bits(480) | 0.0 | 100/102(98%) | 0/102(0%) | Minus/Minus |
Query 619 T*LIVDKLAS*EARLGPKL*LDFGVYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEESLPINNSQTFP 924 T*LIVDKLAS*EARLGPKL*LDFGVYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD* NYFIFLTFVYFKFIEESLPIN+SQTFP Subject 18007 T*LIVDKLAS*EARLGPKL*LDFGVYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*LNYFIFLTFVYFKFIEESLPINSSQTFP 18312
Range 7: 17719 to 18009 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
225.1 bits(485) | 0.0 | 95/97(98%) | 0/97(0%) | Plus/Plus |
Query 330 *RFVAEHYKIVMLFSQCQIFKRVTIIATYLRMFVSGANCLLL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRKG 620 *RFVAEHYK VMLFSQCQIFKRVTIIATYLRMFVSGANC LL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRKG Subject 17719 *RFVAEHYKNVMLFSQCQIFKRVTIIATYLRMFVSGANC*LL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRKG 18009
Range 8: 17392 to 17658 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
211.8 bits(456) | 0.0 | 87/89(98%) | 0/89(0%) | Plus/Plus |
Query 3 CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*VINALTNT*C*LRPDWPQLKEQTYYER 269 CIEQFSLTV*TPPSLMTKWGVWWA*LEV LNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*VINALTNT*C*LRPDWPQLKE+TYYER Subject 17392 CIEQFSLTV*TPPSLMTKWGVWWA*LEV*LNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*VINALTNT*C*LRPDWPQLKEKTYYER 17658
Range 9: 17989 to 18312 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
185.7 bits(399) | 0.0 | 100/108(93%) | 0/108(0%) | Plus/Plus |
Query 601 LAYVEKGEGL*IINR*RLFNKFEINKSKKNEXXXXXXXXXXXXCRIGYISR*DD*TLPHGLIL*YL*N*SVKSIVILY*YSIINAKIQLKFGT*AGLLRG*LIDNKLG 924 ++ KGEGL INR*RLFNKFEINKSKKNEII+LVFLFVFRFCRIGYISR*DD*TLPHGLIL*YL*N*SVKSIVILY*YSIINAKIQLKFGT*AGLLRG*LIDNKLG Subject 17989 ISICRKGEGLGTINR*RLFNKFEINKSKKNEIIKLVFLFVFRFCRIGYISR*DD*TLPHGLIL*YL*N*SVKSIVILY*YSIINAKIQLKFGT*AGLLRG*LIDNKLG 18312
Range 10: 17390 to 17611 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
169.2 bits(363) | 0.0 | 73/74(99%) | 0/74(0%) | Plus/Plus |
Query 1 AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFGRCSGGHQVDGVIRSVSWKEGKQKISWILK*SMH*QIHDAN 222 AA*NNSH*QYRLRLRL*PSGVFGGHS*RF *TFGRCSGGHQVDGVIRSVSWKEGKQKISWILK*SMH*QIHDAN Subject 17390 AA*NNSH*QYRLRLRL*PSGVFGGHS*RFD*TFGRCSGGHQVDGVIRSVSWKEGKQKISWILK*SMH*QIHDAN 17611
Range 11: 18137 to 18313 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
124.3 bits(265) | 0.0 | 59/59(100%) | 0/59(0%) | Plus/Plus |
Query 749 RGKMTKLYLTV*YSDICKISP*SR**YYISIV**TPKSN*SLGPRRASYEANLSTIS*V 925 RGKMTKLYLTV*YSDICKISP*SR**YYISIV**TPKSN*SLGPRRASYEANLSTIS*V Subject 18137 RGKMTKLYLTV*YSDICKISP*SR**YYISIV**TPKSN*SLGPRRASYEANLSTIS*V 18313
Range 12: 17858 to 18013 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.0 bits(238) | 0.0 | 51/52(98%) | 0/52(0%) | Plus/Plus |
Query 469 GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKGE 624 GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKG+ Subject 17858 GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKGK 18013
Range 13: 17654 to 17797 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.5 bits(226) | 0.0 | 47/48(98%) | 0/48(0%) | Plus/Plus |
Query 265 NESSSQW**VLFKFRDR*DVALDALLRSTIKLLCCSASVKFSNGLQLS 408 NESSSQW**VLFKFRDR*DVALDALLRSTIK+LCCSASVKFSNGLQLS Subject 17654 NESSSQW**VLFKFRDR*DVALDALLRSTIKMLCCSASVKFSNGLQLS 17797
Range 14: 18002 to 18097 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
58.8 bits(122) | 0.0 | 28/32(88%) | 0/32(0%) | Plus/Plus |
Query 614 KRGKVCELLIGKDSSINLK*TKVRKMK*LG*S 709 ++GKV ELLIGKDSSINLK*TKVRKMK*L *S Subject 18002 EKGKVWELLIGKDSSINLK*TKVRKMK*LS*S 18097
Range 15: 18093 to 18311 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
164.6 bits(353) | 0.0 | 73/73(100%) | 0/73(0%) | Minus/Minus |
Query 705 PNLLSIS*PRKRPA*VPNFNWILAFIILY*YNITIDFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT 923 PNLLSIS*PRKRPA*VPNFNWILAFIILY*YNITIDFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT Subject 18093 PNLLSIS*PRKRPA*VPNFNWILAFIILY*YNITIDFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT 18311
Range 16: 17390 to 17611 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
129.8 bits(277) | 0.0 | 73/74(99%) | 0/74(0%) | Minus/Minus |
Query 1 VSIMYLLVH*SXXXXXXXXXXXXXRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS 222 VSIMYLLVH*SLKYPRYLLLPLFPRHTSNNSIDLMTSRTSSECL KPLAMPTKHPTWS*AKAESILSMRIVLCS Subject 17390 VSIMYLLVH*SLKYPRYLLLPLFPRHTSNNSIDLMTSRTSSECLIKPLAMPTKHPTWS*AKAESILSMRIVLCS 17611
Range 17: 17651 to 17830 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
126.2 bits(269) | 0.0 | 59/60(98%) | 0/60(0%) | Minus/Minus |
Query 262 *HR*QTCANK*R*L*PV*KFDTG*TT*QFYSAPQQSVKSNILAIPKFEENLLPLTR*FVR 441 *HR*QTCANK*R*L*PV*KFDTG*TT* FYSAPQQSVKSNILAIPKFEENLLPLTR*FVR Subject 17651 *HR*QTCANK*R*L*PV*KFDTG*TT*HFYSAPQQSVKSNILAIPKFEENLLPLTR*FVR 17830
Range 18: 17897 to 18010 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
92.3 bits(195) | 0.0 | 38/38(100%) | 0/38(0%) | Minus/Minus |
Query 508 PLFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR 621 PLFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR Subject 17897 PLFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR 18010
Range 19: 9950 to 10048 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
83.5 bits(176) | 0.0 | 33/33(100%) | 0/33(0%) | Minus/Plus |
Query 927 YYVGYFGATPKVFPLCV*PLM*VSLFYFCLLGG 1025 YYVGYFGATPKVFPLCV*PLM*VSLFYFCLLGG Subject 9950 YYVGYFGATPKVFPLCV*PLM*VSLFYFCLLGG 10048
Range 20: 9952 to 10047 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.0 bits(166) | 0.0 | 31/32(97%) | 0/32(0%) | Minus/Plus |
Query 928 LRRLFWRYAKGFSSLCVAFNVGFFVLFLPFRR 1023 LRRL WRYAKGFSSLCVAFNVGFFVLFLPFRR Subject 9952 LRRLLWRYAKGFSSLCVAFNVGFFVLFLPFRR 10047
Range 21: 9952 to 10059 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.0 bits(164) | 0.0 | 33/36(92%) | 0/36(0%) | Plus/Minus |
Query 916 KLGQPPKRQK*NKETYIKGYTQRGKTFGVAPK*PT* 1023 K PPKRQK*NKETYIKGYTQRGKTFGVAPK*PT* Subject 9952 KRNAPPKRQK*NKETYIKGYTQRGKTFGVAPK*PT* 10059
Grapevine leafroll associated virus 3 isolate Cl 766, complete genome
Sequence ID: EU344893.1 Length: 17919 Number of Matches: 23
Range 1: 16998 to 17615 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
475.3 bits(1031) | 0.0 | 203/206(99%) | 0/206(0%) | Minus/Minus |
Query 3 PFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQQTISTANKHAQISSDNCNPFENLTLAEQHNNFIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVCLLLQLRPVRPELASCIC*CIDHLSIQDIFCFPSFHDTLRITPST**PPEHLPNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA 620 PFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQ TISTANKHAQISSDNCNPFENLTLAEQHN FIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVCLLLQLRPVRPELASCIC* IDHLSIQDIFCFPSFHDTLRITPST**PPEHLPNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA Subject 16998 PFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQLTISTANKHAQISSDNCNPFENLTLAEQHNIFIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVCLLLQLRPVRPELASCIC*YIDHLSIQDIFCFPSFHDTLRITPST**PPEHLPNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA 17615
Range 2: 17608 to 17919 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
239.3 bits(516) | 0.0 | 102/104(98%) | 0/104(0%) | Minus/Minus |
Query 614 DLTYCR*VSLVRGPPRSQTLIGFWRLLYYTNIISLSTLRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**FTDLPPF 925 DLTYCR*VSLVRGPPRSQTLIGFWRLLYYTNIISLSTLRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**F DLP F Subject 17608 DLTYCR*VSLVRGPPRSQTLIGFWRLLYYTNIISLSTLRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**FPDLPFF 17919
Range 3: 16997 to 17620 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
476.7 bits(1034) | 0.0 | 203/208(98%) | 0/208(0%) | Plus/Plus |
Query 2 LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEGADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL*NCYVVQPVSNFQTGYNYRYLFAHVC*RC*LFVVVEGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*KRGK 625 LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVE ADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL* CYVVQPVSNFQTGYNYRYLFAHVC*RC*L VVVEGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*K+G+ Subject 16997 LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEEADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL*KCYVVQPVSNFQTGYNYRYLFAHVC*RC*LLVVVEGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*KKGR 17620
Range 4: 17609 to 17917 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
215.1 bits(463) | 0.0 | 101/103(98%) | 0/103(0%) | Plus/Plus |
Query 615 KGGRSVNY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*YNKRQNPIKVWDLGGPLTRLTYRQ*VR 923 K GRS NY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*YNKRQNPIKVWDLGGPLTRLTYRQ*VR Subject 17609 KKGRSGNY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*YNKRQNPIKVWDLGGPLTRLTYRQ*VR 17917
Range 5: 16997 to 17611 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
424.5 bits(920) | 0.0 | 201/205(98%) | 0/205(0%) | Minus/Minus |
Query 2 FLHMLIRAYK**LXXXXXXXXXXXTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNNKQLAPLTNMRK*VAIIVTRLKI*HWLNNITIL*CSATKRQEQHPSDPEI*RELITTD*MIRS*YVCSFNCGQSGLS*HHVFVSALIT*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ 616 FLHMLIRAYK**LINIPINVTPINTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNN QLAPLTNMRK*VAIIVTRLKI*HWLNNIT L*CSATKRQEQHPSDPEI*RELITTD*MIRS*YVC FNCGQSGLS*HHVFVS LIT*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ Subject 16997 FLHMLIRAYK**LINIPINVTPINTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNN*QLAPLTNMRK*VAIIVTRLKI*HWLNNITFL*CSATKRQEQHPSDPEI*RELITTD*MIRS*YVCFFNCGQSGLS*HHVFVSTLIT*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ 17611
Range 6: 17613 to 17918 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.4 bits(490) | 0.0 | 101/102(99%) | 0/102(0%) | Minus/Minus |
Query 619 T*LIVDKLAS*EARLGPKL*LDFGVYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEESLPINNSQTFP 924 T*LIVDKLAS*EARLGPKL*LDFGVYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEESLPIN+SQTFP Subject 17613 T*LIVDKLAS*EARLGPKL*LDFGVYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEESLPINSSQTFP 17918
Range 7: 17325 to 17612 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
222.4 bits(479) | 0.0 | 94/96(98%) | 0/96(0%) | Plus/Plus |
Query 330 *RFVAEHYKIVMLFSQCQIFKRVTIIATYLRMFVSGANCLLL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRK 617 *RFVAEHYK VMLFSQCQIFKRVTIIATYLRMFVSGANC LL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRK Subject 17325 *RFVAEHYKNVMLFSQCQIFKRVTIIATYLRMFVSGANC*LL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRK 17612
Range 8: 16998 to 17264 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
216.0 bits(465) | 0.0 | 87/89(98%) | 0/89(0%) | Plus/Plus |
Query 3 CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*VINALTNT*C*LRPDWPQLKEQTYYER 269 CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*VIN LTNT*C*LRPDWPQLK+QTYYER Subject 16998 CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*VINVLTNT*C*LRPDWPQLKKQTYYER 17264
Range 9: 17595 to 17918 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
182.1 bits(391) | 0.0 | 100/108(93%) | 0/108(0%) | Plus/Plus |
Query 601 LAYVEKGEGL*IINR*RLFNKFEINKSKKNEXXXXXXXXXXXXCRIGYISR*DD*TLPHGLIL*YL*N*SVKSIVILY*YSIINAKIQLKFGT*AGLLRG*LIDNKLG 924 ++ K EGL INR*RLFNKFEINKSKKNEIIRLVFLFVFRFCRIGYISR*DD*TLPHGLIL*YL*N*SVKSIVILY*YSIINAKIQLKFGT*AGLLRG*LIDNKLG Subject 17595 ISICRKREGLGTINR*RLFNKFEINKSKKNEIIRLVFLFVFRFCRIGYISR*DD*TLPHGLIL*YL*N*SVKSIVILY*YSIINAKIQLKFGT*AGLLRG*LIDNKLG 17918
Range 10: 16996 to 17217 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
169.2 bits(363) | 0.0 | 73/74(99%) | 0/74(0%) | Plus/Plus |
Query 1 AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFGRCSGGHQVDGVIRSVSWKEGKQKISWILK*SMH*QIHDAN 222 AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFGRCSGGHQVDGVIRSVSWKEGKQKISWILK*SM+*QIHDAN Subject 16996 AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFGRCSGGHQVDGVIRSVSWKEGKQKISWILK*SMY*QIHDAN 17217
Range 11: 17743 to 17919 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
124.3 bits(265) | 0.0 | 59/59(100%) | 0/59(0%) | Plus/Plus |
Query 749 RGKMTKLYLTV*YSDICKISP*SR**YYISIV**TPKSN*SLGPRRASYEANLSTIS*V 925 RGKMTKLYLTV*YSDICKISP*SR**YYISIV**TPKSN*SLGPRRASYEANLSTIS*V Subject 17743 RGKMTKLYLTV*YSDICKISP*SR**YYISIV**TPKSN*SLGPRRASYEANLSTIS*V 17919
Range 12: 17464 to 17619 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.0 bits(238) | 0.0 | 51/52(98%) | 0/52(0%) | Plus/Plus |
Query 469 GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKGE 624 GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKG+ Subject 17464 GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKGK 17619
Range 13: 17260 to 17403 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.5 bits(226) | 0.0 | 47/48(98%) | 0/48(0%) | Plus/Plus |
Query 265 NESSSQW**VLFKFRDR*DVALDALLRSTIKLLCCSASVKFSNGLQLS 408 NESSSQW**VLFKFRDR*DVALDALLRSTIK+LCCSASVKFSNGLQLS Subject 17260 NESSSQW**VLFKFRDR*DVALDALLRSTIKMLCCSASVKFSNGLQLS 17403
Range 14: 17608 to 17703 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
61.6 bits(128) | 0.0 | 29/32(91%) | 0/32(0%) | Plus/Plus |
Query 614 KRGKVCELLIGKDSSINLK*TKVRKMK*LG*S 709 ++GKV ELLIGKDSSINLK*TKVRKMK*LG*S Subject 17608 EKGKVWELLIGKDSSINLK*TKVRKMK*LG*S 17703
Range 15: 17699 to 17917 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
164.6 bits(353) | 0.0 | 73/73(100%) | 0/73(0%) | Minus/Minus |
Query 705 PNLLSIS*PRKRPA*VPNFNWILAFIILY*YNITIDFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT 923 PNLLSIS*PRKRPA*VPNFNWILAFIILY*YNITIDFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT Subject 17699 PNLLSIS*PRKRPA*VPNFNWILAFIILY*YNITIDFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT 17917
Range 16: 16996 to 17217 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.6 bits(283) | 0.0 | 74/74(100%) | 0/74(0%) | Minus/Minus |
Query 1 VSIMYLLVH*SXXXXXXXXXXXXXRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS 222 VSIMYLLVH*SLKYPRYLLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS Subject 16996 VSIMYLLVH*SLKYPRYLLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS 17217
Range 17: 17257 to 17436 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
126.2 bits(269) | 0.0 | 59/60(98%) | 0/60(0%) | Minus/Minus |
Query 262 *HR*QTCANK*R*L*PV*KFDTG*TT*QFYSAPQQSVKSNILAIPKFEENLLPLTR*FVR 441 *HR*QTCANK*R*L*PV*KFDTG*TT* FYSAPQQSVKSNILAIPKFEENLLPLTR*FVR Subject 17257 *HR*QTCANK*R*L*PV*KFDTG*TT*HFYSAPQQSVKSNILAIPKFEENLLPLTR*FVR 17436
Range 18: 17503 to 17616 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.4 bits(191) | 0.0 | 37/38(97%) | 0/38(0%) | Minus/Minus |
Query 508 PLFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR 621 P FYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR Subject 17503 PFFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR 17616
Range 19: 9556 to 9654 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
83.5 bits(176) | 0.0 | 33/33(100%) | 0/33(0%) | Minus/Plus |
Query 927 YYVGYFGATPKVFPLCV*PLM*VSLFYFCLLGG 1025 YYVGYFGATPKVFPLCV*PLM*VSLFYFCLLGG Subject 9556 YYVGYFGATPKVFPLCV*PLM*VSLFYFCLLGG 9654
Range 20: 9558 to 9653 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.0 bits(166) | 0.0 | 31/32(97%) | 0/32(0%) | Minus/Plus |
Query 928 LRRLFWRYAKGFSSLCVAFNVGFFVLFLPFRR 1023 LRRL WRYAKGFSSLCVAFNVGFFVLFLPFRR Subject 9558 LRRLLWRYAKGFSSLCVAFNVGFFVLFLPFRR 9653
Range 21: 9558 to 9665 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.0 bits(164) | 0.0 | 33/36(92%) | 0/36(0%) | Plus/Minus |
Query 916 KLGQPPKRQK*NKETYIKGYTQRGKTFGVAPK*PT* 1023 K PPKRQK*NKETYIKGYTQRGKTFGVAPK*PT* Subject 9558 KRNAPPKRQK*NKETYIKGYTQRGKTFGVAPK*PT* 9665
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 23
Range 1: 17577 to 18194 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
473.0 bits(1026) | 0.0 | 202/206(98%) | 0/206(0%) | Minus/Minus |
Query 3 PFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQQTISTANKHAQISSDNCNPFENLTLAEQHNNFIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVCLLLQLRPVRPELASCIC*CIDHLSIQDIFCFPSFHDTLRITPST**PPEHLPNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA 620 PFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQ TISTANKHAQISSDNCNPFENLTLAEQHN FIVLRNKASRATS*RSRNLKRTYY *LDDSFVVCLLLQLRPVRPELASCIC*CID LSIQDIFCFPSFHDTLRITPST**PPEHLPNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA Subject 17577 PFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQLTISTANKHAQISSDNCNPFENLTLAEQHNIFIVLRNKASRATS*RSRNLKRTYYR*LDDSFVVCLLLQLRPVRPELASCIC*CIDRLSIQDIFCFPSFHDTLRITPST**PPEHLPNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA 18194
Range 2: 18187 to 18498 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
240.3 bits(518) | 0.0 | 102/104(98%) | 0/104(0%) | Minus/Minus |
Query 614 DLTYCR*VSLVRGPPRSQTLIGFWRLLYYTNIISLSTLRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**FTDLPPF 925 DLTYCR*VSLVRGPPRSQTLIGFWRLLYYTNIISLSTLRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**F DLP F Subject 18187 DLTYCR*VSLVRGPPRSQTLIGFWRLLYYTNIISLSTLRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**FPDLPVF 18498
Range 3: 17576 to 18199 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
475.3 bits(1031) | 0.0 | 203/208(98%) | 0/208(0%) | Plus/Plus |
Query 2 LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEGADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL*NCYVVQPVSNFQTGYNYRYLFAHVC*RC*LFVVVEGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*KRGK 625 LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVE ADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL* CYVVQPVSNFQTGYNYRYLFAHVC*RC*L VVVEGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*K G+ Subject 17576 LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEEADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL*KCYVVQPVSNFQTGYNYRYLFAHVC*RC*LLVVVEGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*KTGR 18199
Range 4: 18188 to 18496 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
215.1 bits(463) | 0.0 | 101/103(98%) | 0/103(0%) | Plus/Plus |
Query 615 KGGRSVNY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*YNKRQNPIKVWDLGGPLTRLTYRQ*VR 923 K GRS NY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*YNKRQNPIKVWDLGGPLTRLTYRQ*VR Subject 18188 KTGRSGNY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*YNKRQNPIKVWDLGGPLTRLTYRQ*VR 18496
Range 5: 17576 to 18190 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
421.7 bits(914) | 0.0 | 200/205(98%) | 0/205(0%) | Minus/Minus |
Query 2 FLHMLIRAYK**LXXXXXXXXXXXTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNNKQLAPLTNMRK*VAIIVTRLKI*HWLNNITIL*CSATKRQEQHPSDPEI*RELITTD*MIRS*YVCSFNCGQSGLS*HHVFVSALIT*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ 616 FLHMLIRAYK**LINIPINVTPINTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNN QLAPLTNMRK*VAIIVTRLKI*HWLNNIT L*CSATKRQEQHPSDPEI*RELIT D*MIRS*YVC FNCGQSGLS*HHVFVSALI *VSKISFASPLSTTHFE*LHRLDDLQNIFRMFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ Subject 17576 FLHMLIRAYK**LINIPINVTPINTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNN*QLAPLTNMRK*VAIIVTRLKI*HWLNNITFL*CSATKRQEQHPSDPEI*RELITAD*MIRS*YVCFFNCGQSGLS*HHVFVSALIA*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ 18190
Range 6: 18192 to 18497 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.4 bits(490) | 0.0 | 101/102(99%) | 0/102(0%) | Minus/Minus |
Query 619 T*LIVDKLAS*EARLGPKL*LDFGVYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEESLPINNSQTFP 924 T*LIVDKLAS*EARLGPKL*LDFGVYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEESLPIN+SQTFP Subject 18192 T*LIVDKLAS*EARLGPKL*LDFGVYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEESLPINSSQTFP 18497
Range 7: 17904 to 18191 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
222.4 bits(479) | 0.0 | 94/96(98%) | 0/96(0%) | Plus/Plus |
Query 330 *RFVAEHYKIVMLFSQCQIFKRVTIIATYLRMFVSGANCLLL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRK 617 *RFVAEHYK VMLFSQCQIFKRVTIIATYLRMFVSGANC LL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRK Subject 17904 *RFVAEHYKNVMLFSQCQIFKRVTIIATYLRMFVSGANC*LL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRK 18191
Range 8: 17577 to 17843 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
216.0 bits(465) | 0.0 | 87/89(98%) | 0/89(0%) | Plus/Plus |
Query 3 CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*VINALTNT*C*LRPDWPQLKEQTYYER 269 CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIRKMFWRSSSRWSYSKCVVERGEAKDILDT* INALTNT*C*LRPDWPQLK+QTYYER Subject 17577 CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*AINALTNT*C*LRPDWPQLKKQTYYER 17843
Range 9: 18174 to 18497 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
182.1 bits(391) | 0.0 | 100/108(93%) | 0/108(0%) | Plus/Plus |
Query 601 LAYVEKGEGL*IINR*RLFNKFEINKSKKNEXXXXXXXXXXXXCRIGYISR*DD*TLPHGLIL*YL*N*SVKSIVILY*YSIINAKIQLKFGT*AGLLRG*LIDNKLG 924 ++ K EGL INR*RLFNKFEINKSKKNEIIRLVFLFVFRFCRIGYISR*DD*TLPHGLIL*YL*N*SVKSIVILY*YSIINAKIQLKFGT*AGLLRG*LIDNKLG Subject 18174 ISICRKREGLGTINR*RLFNKFEINKSKKNEIIRLVFLFVFRFCRIGYISR*DD*TLPHGLIL*YL*N*SVKSIVILY*YSIINAKIQLKFGT*AGLLRG*LIDNKLG 18497
Range 10: 17575 to 17796 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
169.7 bits(364) | 0.0 | 73/74(99%) | 0/74(0%) | Plus/Plus |
Query 1 AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFGRCSGGHQVDGVIRSVSWKEGKQKISWILK*SMH*QIHDAN 222 AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFGRCSGGHQVDGVIRSVSWKEGKQKISWILK SMH*QIHDAN Subject 17575 AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFGRCSGGHQVDGVIRSVSWKEGKQKISWILKRSMH*QIHDAN 17796
Range 11: 18322 to 18498 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
124.3 bits(265) | 0.0 | 59/59(100%) | 0/59(0%) | Plus/Plus |
Query 749 RGKMTKLYLTV*YSDICKISP*SR**YYISIV**TPKSN*SLGPRRASYEANLSTIS*V 925 RGKMTKLYLTV*YSDICKISP*SR**YYISIV**TPKSN*SLGPRRASYEANLSTIS*V Subject 18322 RGKMTKLYLTV*YSDICKISP*SR**YYISIV**TPKSN*SLGPRRASYEANLSTIS*V 18498
Range 12: 18043 to 18198 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
109.7 bits(233) | 0.0 | 50/52(96%) | 0/52(0%) | Plus/Plus |
Query 469 GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKGE 624 GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVE G+ Subject 18043 GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVENGK 18198
Range 13: 17839 to 17982 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
100.0 bits(212) | 0.0 | 46/48(96%) | 0/48(0%) | Plus/Plus |
Query 265 NESSSQW**VLFKFRDR*DVALDALLRSTIKLLCCSASVKFSNGLQLS 408 NESSSQ **VLFKFRDR*DVALDALLRSTIK+LCCSASVKFSNGLQLS Subject 17839 NESSSQR**VLFKFRDR*DVALDALLRSTIKMLCCSASVKFSNGLQLS 17982
Range 14: 18187 to 18282 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
60.6 bits(126) | 0.0 | 29/32(91%) | 0/32(0%) | Plus/Plus |
Query 614 KRGKVCELLIGKDSSINLK*TKVRKMK*LG*S 709 + GKV ELLIGKDSSINLK*TKVRKMK*LG*S Subject 18187 ENGKVWELLIGKDSSINLK*TKVRKMK*LG*S 18282
Range 15: 18278 to 18496 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
164.6 bits(353) | 0.0 | 73/73(100%) | 0/73(0%) | Minus/Minus |
Query 705 PNLLSIS*PRKRPA*VPNFNWILAFIILY*YNITIDFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT 923 PNLLSIS*PRKRPA*VPNFNWILAFIILY*YNITIDFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT Subject 18278 PNLLSIS*PRKRPA*VPNFNWILAFIILY*YNITIDFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT 18496
Range 16: 17575 to 17796 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.6 bits(283) | 0.0 | 74/74(100%) | 0/74(0%) | Minus/Minus |
Query 1 VSIMYLLVH*SXXXXXXXXXXXXXRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS 222 VSIMYLLVH*SLKYPRYLLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS Subject 17575 VSIMYLLVH*SLKYPRYLLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS 17796
Range 17: 17836 to 18015 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
126.2 bits(269) | 0.0 | 59/60(98%) | 0/60(0%) | Minus/Minus |
Query 262 *HR*QTCANK*R*L*PV*KFDTG*TT*QFYSAPQQSVKSNILAIPKFEENLLPLTR*FVR 441 *HR*QTCANK*R*L*PV*KFDTG*TT* FYSAPQQSVKSNILAIPKFEENLLPLTR*FVR Subject 17836 *HR*QTCANK*R*L*PV*KFDTG*TT*HFYSAPQQSVKSNILAIPKFEENLLPLTR*FVR 18015
Range 18: 18082 to 18195 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.9 bits(192) | 0.0 | 37/38(97%) | 0/38(0%) | Minus/Minus |
Query 508 PLFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR 621 P+FYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR Subject 18082 PVFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR 18195
Range 19: 10135 to 10233 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
83.5 bits(176) | 0.0 | 33/33(100%) | 0/33(0%) | Minus/Plus |
Query 927 YYVGYFGATPKVFPLCV*PLM*VSLFYFCLLGG 1025 YYVGYFGATPKVFPLCV*PLM*VSLFYFCLLGG Subject 10135 YYVGYFGATPKVFPLCV*PLM*VSLFYFCLLGG 10233
Range 20: 10137 to 10232 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.0 bits(166) | 0.0 | 31/32(97%) | 0/32(0%) | Minus/Plus |
Query 928 LRRLFWRYAKGFSSLCVAFNVGFFVLFLPFRR 1023 LRRL WRYAKGFSSLCVAFNVGFFVLFLPFRR Subject 10137 LRRLLWRYAKGFSSLCVAFNVGFFVLFLPFRR 10232
Range 21: 10137 to 10244 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.0 bits(164) | 0.0 | 33/36(92%) | 0/36(0%) | Plus/Minus |
Query 916 KLGQPPKRQK*NKETYIKGYTQRGKTFGVAPK*PT* 1023 K PPKRQK*NKETYIKGYTQRGKTFGVAPK*PT* Subject 10137 KRNAPPKRQK*NKETYIKGYTQRGKTFGVAPK*PT* 10244
Grapevine leafroll associated virus 3 isolate WA MR, complete genome
Sequence ID: GU983863.1 Length: 18498 Number of Matches: 23
Range 1: 17577 to 18194 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
471.6 bits(1023) | 0.0 | 201/206(98%) | 0/206(0%) | Minus/Minus |
Query 3 PFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQQTISTANKHAQISSDNCNPFENLTLAEQHNNFIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVCLLLQLRPVRPELASCIC*CIDHLSIQDIFCFPSFHDTLRITPST**PPEHLPNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA 620 PFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDA VYRYSDGFL*VPHRLLQQ TISTANKHAQISSDNCNPFENLTLA QH+ FIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVCLLLQLRPVRPELASCIC*CIDHLSIQDIFCFPSFHDTLRITPST**PPEHLPNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA Subject 17577 PFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAKVYRYSDGFL*VPHRLLQQLTISTANKHAQISSDNCNPFENLTLAVQHDIFIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVCLLLQLRPVRPELASCIC*CIDHLSIQDIFCFPSFHDTLRITPST**PPEHLPNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA 18194
Range 2: 18187 to 18498 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
238.0 bits(513) | 0.0 | 101/104(97%) | 0/104(0%) | Minus/Minus |
Query 614 DLTYCR*VSLVRGPPRSQTLIGFWRLLYYTNIISLSTLRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**FTDLPPF 925 DLTYCR*VSLVRGPPRSQTLIGFWRLLYYTNIISLSTLRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*R FTY**F DLP F Subject 18187 DLTYCR*VSLVRGPPRSQTLIGFWRLLYYTNIISLSTLRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RAFTY**FPDLPLF 18498
Range 3: 17576 to 18199 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
479.4 bits(1040) | 0.0 | 204/208(98%) | 0/208(0%) | Plus/Plus |
Query 2 LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEGADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL*NCYVVQPVSNFQTGYNYRYLFAHVC*RC*LFVVVEGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*KRGK 625 LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEGADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL* C+VVQPVSNFQTGYNYRYLFAHVC*RC*L VVVEGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*KRG+ Subject 17576 LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEGADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL*KCHVVQPVSNFQTGYNYRYLFAHVC*RC*LLVVVEGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*KRGR 18199
Range 4: 18188 to 18496 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
212.8 bits(458) | 0.0 | 100/103(97%) | 0/103(0%) | Plus/Plus |
Query 615 KGGRSVNY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*YNKRQNPIKVWDLGGPLTRLTYRQ*VR 923 K GRS NY**VK LQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*YNKRQNPIKVWDLGGPLTRLTYRQ*VR Subject 18188 KRGRSGNY**VKALQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*YNKRQNPIKVWDLGGPLTRLTYRQ*VR 18496
Range 5: 17576 to 18193 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
424.9 bits(921) | 0.0 | 201/206(98%) | 0/206(0%) | Minus/Minus |
Query 2 PFLHMLIRAYK**LXXXXXXXXXXXTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNNKQLAPLTNMRK*VAIIVTRLKI*HWLNNITIL*CSATKRQEQHPSDPEI*RELITTD*MIRS*YVCSFNCGQSGLS*HHVFVSALIT*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ 619 PFLHMLIRAYK**LINIPINVTPINTSHPSQTSLRTTQ CIATLMGFSKCLIAFYNN QLAPLTNMRK*VAIIVTRLKI*HWL N+T L*CSATKRQEQHPSDPEI*RELITTD*MIRS*YVCSFNCGQSGLS*HHVFVSALIT*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ Subject 17576 PFLHMLIRAYK**LINIPINVTPINTSHPSQTSLRTTQKCIATLMGFSKCLIAFYNN*QLAPLTNMRK*VAIIVTRLKI*HWLYNMTFL*CSATKRQEQHPSDPEI*RELITTD*MIRS*YVCSFNCGQSGLS*HHVFVSALIT*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ 18193
Range 6: 18192 to 18497 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
225.1 bits(485) | 0.0 | 100/102(98%) | 0/102(0%) | Minus/Minus |
Query 619 T*LIVDKLAS*EARLGPKL*LDFGVYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEESLPINNSQTFP 924 T*LIVDKLAS*EARLGPKL*LDFGVYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEE LPIN+SQTFP Subject 18192 T*LIVDKLAS*EARLGPKL*LDFGVYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEEPLPINSSQTFP 18497
Range 7: 17904 to 18194 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
221.9 bits(478) | 0.0 | 93/97(96%) | 0/97(0%) | Plus/Plus |
Query 330 *RFVAEHYKIVMLFSQCQIFKRVTIIATYLRMFVSGANCLLL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRKG 620 *RFVAEHYK VML+SQCQIFKRVTIIATYLRMFVSGANC LL*KAMRHLEKPIRVAIH+CVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRKG Subject 17904 *RFVAEHYKNVMLYSQCQIFKRVTIIATYLRMFVSGANC*LL*KAMRHLEKPIRVAIHFCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRKG 18194
Range 8: 17577 to 17843 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
219.6 bits(473) | 0.0 | 89/89(100%) | 0/89(0%) | Plus/Plus |
Query 3 CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*VINALTNT*C*LRPDWPQLKEQTYYER 269 CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*VINALTNT*C*LRPDWPQLKEQTYYER Subject 17577 CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*VINALTNT*C*LRPDWPQLKEQTYYER 17843
Range 9: 18174 to 18497 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
185.7 bits(399) | 0.0 | 101/108(94%) | 0/108(0%) | Plus/Plus |
Query 601 LAYVEKGEGL*IINR*RLFNKFEINKSKKNEXXXXXXXXXXXXCRIGYISR*DD*TLPHGLIL*YL*N*SVKSIVILY*YSIINAKIQLKFGT*AGLLRG*LIDNKLG 924 ++ KGEGL INR*RLFNKFEINKSKKNEIIRLVFLFVFRFCRIGYISR*DD*TLPHGLIL*YL*N*SVKSIVILY*YSIINAKIQLKFGT*AGLLRG*LIDNKLG Subject 18174 ISICRKGEGLGTINR*RLFNKFEINKSKKNEIIRLVFLFVFRFCRIGYISR*DD*TLPHGLIL*YL*N*SVKSIVILY*YSIINAKIQLKFGT*AGLLRG*LIDNKLG 18497
Range 10: 17575 to 17796 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
172.0 bits(369) | 0.0 | 74/74(100%) | 0/74(0%) | Plus/Plus |
Query 1 AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFGRCSGGHQVDGVIRSVSWKEGKQKISWILK*SMH*QIHDAN 222 AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFGRCSGGHQVDGVIRSVSWKEGKQKISWILK*SMH*QIHDAN Subject 17575 AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFGRCSGGHQVDGVIRSVSWKEGKQKISWILK*SMH*QIHDAN 17796
Range 11: 18322 to 18498 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
124.3 bits(265) | 0.0 | 59/59(100%) | 0/59(0%) | Plus/Plus |
Query 749 RGKMTKLYLTV*YSDICKISP*SR**YYISIV**TPKSN*SLGPRRASYEANLSTIS*V 925 RGKMTKLYLTV*YSDICKISP*SR**YYISIV**TPKSN*SLGPRRASYEANLSTIS*V Subject 18322 RGKMTKLYLTV*YSDICKISP*SR**YYISIV**TPKSN*SLGPRRASYEANLSTIS*V 18498
Range 12: 18043 to 18198 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
110.1 bits(234) | 0.0 | 50/52(96%) | 0/52(0%) | Plus/Plus |
Query 469 GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKGE 624 GT*RNPSE*RYT ASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKG+ Subject 18043 GT*RNPSE*RYTFASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKGK 18198
Range 13: 17839 to 17982 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
102.3 bits(217) | 0.0 | 45/48(94%) | 0/48(0%) | Plus/Plus |
Query 265 NESSSQW**VLFKFRDR*DVALDALLRSTIKLLCCSASVKFSNGLQLS 408 NESSSQW**VLFKFRDR*DVALDALLRSTIK+ CC+ASVKFSNGLQLS Subject 17839 NESSSQW**VLFKFRDR*DVALDALLRSTIKMSCCTASVKFSNGLQLS 17982
Range 14: 18187 to 18282 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
58.3 bits(121) | 0.0 | 28/32(88%) | 0/32(0%) | Plus/Plus |
Query 614 KRGKVCELLIGKDSSINLK*TKVRKMK*LG*S 709 ++GKV ELLIGK SSINLK*TKVRKMK*LG*S Subject 18187 EKGKVWELLIGKGSSINLK*TKVRKMK*LG*S 18282
Range 15: 18278 to 18496 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
164.6 bits(353) | 0.0 | 73/73(100%) | 0/73(0%) | Minus/Minus |
Query 705 PNLLSIS*PRKRPA*VPNFNWILAFIILY*YNITIDFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT 923 PNLLSIS*PRKRPA*VPNFNWILAFIILY*YNITIDFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT Subject 18278 PNLLSIS*PRKRPA*VPNFNWILAFIILY*YNITIDFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT 18496
Range 16: 17575 to 17796 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.6 bits(283) | 0.0 | 74/74(100%) | 0/74(0%) | Minus/Minus |
Query 1 VSIMYLLVH*SXXXXXXXXXXXXXRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS 222 VSIMYLLVH*SLKYPRYLLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS Subject 17575 VSIMYLLVH*SLKYPRYLLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS 17796
Range 17: 17836 to 18015 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.9 bits(264) | 0.0 | 58/60(97%) | 0/60(0%) | Minus/Minus |
Query 262 *HR*QTCANK*R*L*PV*KFDTG*TT*QFYSAPQQSVKSNILAIPKFEENLLPLTR*FVR 441 *HR*QTCANK*R*L*PV*KFDTG TT* FYSAPQQSVKSNILAIPKFEENLLPLTR*FVR Subject 17836 *HR*QTCANK*R*L*PV*KFDTGCTT*HFYSAPQQSVKSNILAIPKFEENLLPLTR*FVR 18015
Range 18: 18082 to 18195 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
92.3 bits(195) | 0.0 | 38/38(100%) | 0/38(0%) | Minus/Minus |
Query 508 PLFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR 621 PLFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR Subject 18082 PLFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR 18195
Range 19: 10135 to 10233 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
80.8 bits(170) | 0.0 | 32/33(97%) | 0/33(0%) | Minus/Plus |
Query 927 YYVGYFGATPKVFPLCV*PLM*VSLFYFCLLGG 1025 YYVGYFGATPKVFPLCV*P M*VSLFYFCLLGG Subject 10135 YYVGYFGATPKVFPLCV*PSM*VSLFYFCLLGG 10233
Range 20: 10137 to 10232 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.0 bits(166) | 0.0 | 31/32(97%) | 0/32(0%) | Minus/Plus |
Query 928 LRRLFWRYAKGFSSLCVAFNVGFFVLFLPFRR 1023 LRRL WRYAKGFSSLCVAFNVGFFVLFLPFRR Subject 10137 LRRLLWRYAKGFSSLCVAFNVGFFVLFLPFRR 10232
Range 21: 10135 to 10239 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
76.7 bits(161) | 0.0 | 32/35(91%) | 0/35(0%) | Plus/Minus |
Query 921 RSAA*KAKIKQRNLH*RLHTKRKNLWRSAKITYVI 1025 + AA*KAKIKQRNLH*RLHTKRKNLWRSAK+TYVI Subject 10135 KRAA*KAKIKQRNLH*RLHTKRKNLWRSAKVTYVI 10239
Grapevine leafroll associated virus 3 isolate 621, complete genome
Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 23
Range 1: 17577 to 18194 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
469.4 bits(1018) | 0.0 | 201/206(98%) | 0/206(0%) | Minus/Minus |
Query 3 PFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQQTISTANKHAQISSDNCNPFENLTLAEQHNNFIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVCLLLQLRPVRPELASCIC*CIDHLSIQDIFCFPSFHDTLRITPST**PPEHLPNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA 620 PFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQ TISTANKH QISSDNCNPFENLTLAEQHN FIVLRNKASRATS*RSRNLKRTYYH*LDDSFVV LLLQLRPVRPELASCIC*CIDHLSI DIFCFPSFHDTLRITPST**PPEHLPNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA Subject 17577 PFSTYAN*SI*IVTNKHTD*RYAYKYIPPITNVTSHDAIVYRYSDGFL*VPHRLLQQLTISTANKHVQISSDNCNPFENLTLAEQHNIFIVLRNKASRATS*RSRNLKRTYYH*LDDSFVVYLLLQLRPVRPELASCIC*CIDHLSI*DIFCFPSFHDTLRITPST**PPEHLPNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA 18194
Range 2: 18187 to 18498 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
236.6 bits(510) | 0.0 | 101/104(97%) | 0/104(0%) | Minus/Minus |
Query 614 DLTYCR*VSLVRGPPRSQTLIGFWRLLYYTNIISLSTLRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**FTDLPPF 925 DLTYCR*VSL RGPPRSQTLIGFWRLLYYTNIISLSTLRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**F DLP F Subject 18187 DLTYCR*VSLERGPPRSQTLIGFWRLLYYTNIISLSTLRTNFTNIRVLNREVEFSHLTSKYNLFYKNEKRTKRLA*LFHFSYFCLFQIY*RVFTY**FPDLPFF 18498
Range 3: 17576 to 18199 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
476.7 bits(1034) | 0.0 | 203/208(98%) | 0/208(0%) | Plus/Plus |
Query 2 LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKRYLGYLSDQCTNKYMMLTQAGLAAVEGADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL*NCYVVQPVSNFQTGYNYRYLFAHVC*RC*LFVVVEGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*KRGK 625 LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKRYL YLSDQCTNKYMMLTQAGLAAVEGADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL* CYVVQPVSNFQTGYNYRYLFAHVC*RC*L VVVEGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*K+G+ Subject 17576 LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKRYLRYLSDQCTNKYMMLTQAGLAAVEGADILRTNHLVSGNKFSSNFGIARMLLLTLCCGAL*KCYVVQPVSNFQTGYNYRYLFAHVC*RC*LLVVVEGDEALRETHQSSDTLLRRAK*RL*WVGCIYRRNVNRYVY*LLFICSN*HM*KKGR 18199
Range 4: 18188 to 18496 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
213.2 bits(459) | 0.0 | 100/103(97%) | 0/103(0%) | Plus/Plus |
Query 615 KGGRSVNY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*YNKRQNPIKVWDLGGPLTRLTYRQ*VR 923 K GRS NY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*YNKRQNPIKVWDLGGPL+RLTYRQ*VR Subject 18188 KKGRSGNY**VKTLQ*I*NKQK*EK*NN*ASLFVRFSFL*NRLYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV*YNKRQNPIKVWDLGGPLSRLTYRQ*VR 18496
Range 5: 17576 to 18190 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
424.9 bits(921) | 0.0 | 201/205(98%) | 0/205(0%) | Minus/Minus |
Query 2 FLHMLIRAYK**LXXXXXXXXXXXTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNNKQLAPLTNMRK*VAIIVTRLKI*HWLNNITIL*CSATKRQEQHPSDPEI*RELITTD*MIRS*YVCSFNCGQSGLS*HHVFVSALIT*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ 616 FLHMLIRAYK**LINIPINVTPINTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNN QLAPLTNM K*VAIIVTRLKI*HWLNNIT L*CSATKRQEQHPSDPEI*RELITTD*MIRS*Y+CSFNCGQSGLS*HHVFVSALIT*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ Subject 17576 FLHMLIRAYK**LINIPINVTPINTSHPSQTSLRTTQ*CIATLMGFSKCLIAFYNN*QLAPLTNMCK*VAIIVTRLKI*HWLNNITFL*CSATKRQEQHPSDPEI*RELITTD*MIRS*YICSFNCGQSGLS*HHVFVSALIT*VSKISFASPLSTTHFE*LHRLDDLQNIFRMFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ 18190
Range 6: 18192 to 18497 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
223.8 bits(482) | 0.0 | 99/102(97%) | 0/102(0%) | Minus/Minus |
Query 619 T*LIVDKLAS*EARLGPKL*LDFGVYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEESLPINNSQTFP 924 T*LIVD+LAS EARLGPKL*LDFGVYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEESLPIN+SQTFP Subject 18192 T*LIVDRLASKEARLGPKL*LDFGVYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNITYSTKTKNEQKD*PNYFIFLTFVYFKFIEESLPINSSQTFP 18497
Range 7: 17904 to 18191 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
220.1 bits(474) | 0.0 | 93/96(97%) | 0/96(0%) | Plus/Plus |
Query 330 *RFVAEHYKIVMLFSQCQIFKRVTIIATYLRMFVSGANCLLL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRK 617 *RFVAEHYK VMLFSQCQIFKRVTIIATYL MFVSGANC LL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRK Subject 17904 *RFVAEHYKNVMLFSQCQIFKRVTIIATYLHMFVSGANC*LL*KAMRHLEKPIRVAIHYCVVRSDVCDGWDVFIGVTLIGMFISYYLYALISICRK 18191
Range 8: 17577 to 17843 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
216.9 bits(467) | 0.0 | 88/89(99%) | 0/89(0%) | Plus/Plus |
Query 3 CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*VINALTNT*C*LRPDWPQLKEQTYYER 269 CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*VINALTNT*C*LRPDWPQLKEQ YYER Subject 17577 CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIRKMFWRSSSRWSYSKCVVERGEAKDILDT*VINALTNT*C*LRPDWPQLKEQIYYER 17843
Range 9: 18174 to 18497 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
177.0 bits(380) | 0.0 | 98/108(91%) | 0/108(0%) | Plus/Plus |
Query 601 LAYVEKGEGL*IINR*RLFNKFEINKSKKNEXXXXXXXXXXXXCRIGYISR*DD*TLPHGLIL*YL*N*SVKSIVILY*YSIINAKIQLKFGT*AGLLRG*LIDNKLG 924 ++ K EGL INR*RLFNKFEINKSKKNEIIRLVFLFVFRFCRIGYISR*DD*TLPHGLIL*YL*N*SVKSIVILY*YSIINAKIQLKFGT*AGL RG* IDNKLG Subject 18174 ISICRKREGLGTINR*RLFNKFEINKSKKNEIIRLVFLFVFRFCRIGYISR*DD*TLPHGLIL*YL*N*SVKSIVILY*YSIINAKIQLKFGT*AGLFRG*PIDNKLG 18497
Range 10: 17575 to 17796 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
165.1 bits(354) | 0.0 | 73/74(99%) | 0/74(0%) | Plus/Plus |
Query 1 AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFGRCSGGHQVDGVIRSVSWKEGKQKISWILK*SMH*QIHDAN 222 AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFGRCSGGHQVDGVIRSVSWKEGKQKIS ILK*SMH*QIHDAN Subject 17575 AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFGRCSGGHQVDGVIRSVSWKEGKQKIS*ILK*SMH*QIHDAN 17796
Range 11: 18322 to 18498 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
122.5 bits(261) | 0.0 | 58/59(98%) | 0/59(0%) | Plus/Plus |
Query 749 RGKMTKLYLTV*YSDICKISP*SR**YYISIV**TPKSN*SLGPRRASYEANLSTIS*V 925 RGKMTKLYLTV*YSDICKISP*SR**YYISIV**TPKSN*SLGPRRAS+EANLSTIS*V Subject 18322 RGKMTKLYLTV*YSDICKISP*SR**YYISIV**TPKSN*SLGPRRASFEANLSTIS*V 18498
Range 12: 18043 to 18198 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.0 bits(238) | 0.0 | 51/52(98%) | 0/52(0%) | Plus/Plus |
Query 469 GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKGE 624 GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKG+ Subject 18043 GT*RNPSE*RYTIASCEVTFVMGGMYL*A*R*SVCLLVTIYML*LAYVEKGK 18198
Range 13: 17839 to 17982 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.5 bits(226) | 0.0 | 47/48(98%) | 0/48(0%) | Plus/Plus |
Query 265 NESSSQW**VLFKFRDR*DVALDALLRSTIKLLCCSASVKFSNGLQLS 408 NESSSQW**VLFKFRDR*DVALDALLRSTIK+LCCSASVKFSNGLQLS Subject 17839 NESSSQW**VLFKFRDR*DVALDALLRSTIKMLCCSASVKFSNGLQLS 17982
Range 14: 18187 to 18282 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
61.6 bits(128) | 0.0 | 29/32(91%) | 0/32(0%) | Plus/Plus |
Query 614 KRGKVCELLIGKDSSINLK*TKVRKMK*LG*S 709 ++GKV ELLIGKDSSINLK*TKVRKMK*LG*S Subject 18187 EKGKVWELLIGKDSSINLK*TKVRKMK*LG*S 18282
Range 15: 18278 to 18496 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
162.8 bits(349) | 0.0 | 72/73(99%) | 0/73(0%) | Minus/Minus |
Query 705 PNLLSIS*PRKRPA*VPNFNWILAFIILY*YNITIDFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT 923 PNLLSI *PRKRPA*VPNFNWILAFIILY*YNITIDFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT Subject 18278 PNLLSIG*PRKRPA*VPNFNWILAFIILY*YNITIDFTD*FYKYQSIKP*GRV*SSYLEI*PILQKRKTNKKT 18496
Range 16: 17575 to 17796 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.6 bits(283) | 0.0 | 73/74(99%) | 0/74(0%) | Minus/Minus |
Query 1 VSIMYLLVH*SXXXXXXXXXXXXXRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS 222 VSIMYLLVH*SLKY RYLLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS Subject 17575 VSIMYLLVH*SLKYLRYLLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS 17796
Range 17: 17836 to 18015 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
126.2 bits(269) | 0.0 | 59/60(98%) | 0/60(0%) | Minus/Minus |
Query 262 *HR*QTCANK*R*L*PV*KFDTG*TT*QFYSAPQQSVKSNILAIPKFEENLLPLTR*FVR 441 *HR*QTCANK*R*L*PV*KFDTG*TT* FYSAPQQSVKSNILAIPKFEENLLPLTR*FVR Subject 17836 *HR*QTCANK*R*L*PV*KFDTG*TT*HFYSAPQQSVKSNILAIPKFEENLLPLTR*FVR 18015
Range 18: 18082 to 18195 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.4 bits(191) | 0.0 | 37/38(97%) | 0/38(0%) | Minus/Minus |
Query 508 PLFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR 621 P FYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR Subject 18082 PFFYIC*LEHINSN**TYRLTLRL*IHPTHHKRHFARR 18195
Range 19: 10135 to 10233 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
83.5 bits(176) | 0.0 | 33/33(100%) | 0/33(0%) | Minus/Plus |
Query 927 YYVGYFGATPKVFPLCV*PLM*VSLFYFCLLGG 1025 YYVGYFGATPKVFPLCV*PLM*VSLFYFCLLGG Subject 10135 YYVGYFGATPKVFPLCV*PLM*VSLFYFCLLGG 10233
Range 20: 10137 to 10232 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.0 bits(166) | 0.0 | 31/32(97%) | 0/32(0%) | Minus/Plus |
Query 928 LRRLFWRYAKGFSSLCVAFNVGFFVLFLPFRR 1023 LRRL WRYAKGFSSLCVAFNVGFFVLFLPFRR Subject 10137 LRRLLWRYAKGFSSLCVAFNVGFFVLFLPFRR 10232
Range 21: 10137 to 10244 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.0 bits(164) | 0.0 | 33/36(92%) | 0/36(0%) | Plus/Minus |
Query 916 KLGQPPKRQK*NKETYIKGYTQRGKTFGVAPK*PT* 1023 K PPKRQK*NKETYIKGYTQRGKTFGVAPK*PT* Subject 10137 KRNAPPKRQK*NKETYIKGYTQRGKTFGVAPK*PT* 10244
Nucleotide Sequence (583 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
261.8 | 1827.9 | 59% | 2.147e-97 | 43% | GU983863.1 | |
264.5 | 1835.2 | 68% | 2.147e-97 | 43% | GQ352631.1 | |
261.8 | 1835.2 | 68% | 4.009e-97 | 45% | JX559645.1 | |
258.6 | 1670.9 | 66% | 1.762e-89 | 45% | KX756669.1 | |
120.2 | 796.0 | 54% | 1.287e-39 | 29% | EU259806.1 |
Alignments
Grapevine leafroll associated virus 3 isolate WA MR, complete genome
Sequence ID: GU983863.1 Length: 18498 Number of Matches: 28
Range 1: 203 to 535 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
247.1 bits(533) | 0.0 | 110/111(99%) | 0/111(0%) | Plus/Minus |
Query 154 NIFKLVKENYEKTENKALKENDVFSFLKGKF*KLN*PNTTMRTNPLKRRLGRVKT*DAEAQRKLNTNLNRL*ES**LLNTKHQKEKRKILLF*RKVNDYKTRNPNKRKEIF 486 NIFKLVKENYEKTENKALKENDVFSFLKGKF*KLN*PNTTMRTNPLKRRLGRVKT*DAEAQRKLNTNLNRL*ES**LLNTKHQKEKRKILLF*RKVNDYKTRNPNKRKE F Subject 203 NIFKLVKENYEKTENKALKENDVFSFLKGKF*KLN*PNTTMRTNPLKRRLGRVKT*DAEAQRKLNTNLNRL*ES**LLNTKHQKEKRKILLF*RKVNDYKTRNPNKRKEKF 535
Range 2: 579 to 686 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.5 bits(165) | 0.0 | 36/36(100%) | 0/36(0%) | Plus/Minus |
Query 3 RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*VLLR 110 RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*VLLR Subject 579 RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*VLLR 686
Range 3: 514 to 591 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.2 bits(112) | 0.0 | 25/26(96%) | 0/26(0%) | Plus/Minus |
Query 98 GVT*ENRKSEH*D*RKLKEIFLNL*R 175 GVT*ENRKS+H*D*RKLKEIFLNL*R Subject 514 GVT*ENRKSKH*D*RKLKEIFLNL*R 591
Range 4: 160 to 219 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
33.1 bits(66) | 0.0 | 13/20(65%) | 0/20(0%) | Plus/Minus |
Query 472 RKEIFFVIFKENYNRNY*QQ 531 R++ FVI KENYN+NY*+Q Subject 160 REKKNFVILKENYNKNY*RQ 219
Range 5: 108 to 140 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
24.0 bits(46) | 0.0 | 9/11(82%) | 0/11(0%) | Plus/Minus |
Query 551 FCFCLGKTKT* 583 FCF LGK KT* Subject 108 FCFSLGKVKT* 140
Range 6: 202 to 534 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
261.8 bits(565) | 0.0 | 109/111(98%) | 0/111(0%) | Minus/Plus |
Query 155 KRFLFSYWGFVFCSH*LSFKITKFFSSLFGVSCLVVINFPRVCLGSCLVFSALPRLKF*LFLSVF*EGWFSSSCWVNLVFKISLLKKKKRHFLLVLCFPFFRSFPSQV*KY 487 K FLFSYWGFVFCSH*LSFKITKFFSSLFGVSCLVVINFPRVCLGSCLVFSALPRLKF*LFLSVF*EGWFS SCWVNLVFKISLLKKKKRHFLLVLCFPFFRSFPSQV*KY Subject 202 KIFLFSYWGFVFCSH*LSFKITKFFSSLFGVSCLVVINFPRVCLGSCLVFSALPRLKF*LFLSVF*EGWFSLSCWVNLVFKISLLKKKKRHFLLVLCFPFFRSFPSQV*KY 534
Range 7: 644 to 688 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
35.0 bits(70) | 0.0 | 15/15(100%) | 0/15(0%) | Minus/Plus |
Query 1 PAV*GKFALLLPSSF 45 PAV*GKFALLLPSSF Subject 644 PAV*GKFALLLPSSF 688
Range 8: 579 to 620 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
32.2 bits(64) | 0.0 | 14/14(100%) | 0/14(0%) | Minus/Plus |
Query 69 PK*HLGIST*DSTS 110 PK*HLGIST*DSTS Subject 579 PK*HLGIST*DSTS 620
Range 9: 195 to 533 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
215.1 bits(463) | 0.0 | 107/113(95%) | 0/113(0%) | Plus/Minus |
Query 156 YF*TCEGKLRKNGKQSTXXXXXXXXXXXEILKTKLTQHDDENQPS*KTLRKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKES**LQNTKPQ*EKRNLFCY 494 YF*TCEGKLRKNGKQSTKRK*RFFFFKREILKTKLTQHD+ENQPS*KTLRKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKES**LQNTKPQ*EKR + + Subject 195 YF*TCEGKLRKNGKQSTKRK*RFFFFKREILKTKLTQHDNENQPS*KTLRKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKES**LQNTKPQ*EKRKILLF 533
Range 10: 643 to 687 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.0 bits(81) | 0.0 | 15/15(100%) | 0/15(0%) | Plus/Minus |
Query 2 KDDGRRRANFPQTAG 46 KDDGRRRANFPQTAG Subject 643 KDDGRRRANFPQTAG 687
Range 11: 578 to 598 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
22.1 bits(42) | 0.0 | 7/7(100%) | 0/7(0%) | Plus/Minus |
Query 91 IPRCYLG 111 IPRCYLG Subject 578 IPRCYLG 598
Range 12: 201 to 293 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
67.0 bits(140) | 0.0 | 28/31(90%) | 0/31(0%) | Minus/Plus |
Query 396 KKISFLLLGFRVL*SLTFL*NNKIFLFSFWC 488 + SFLLLGFRVL*SLTFL*NNKIFLFSFWC Subject 201 QNFSFLLLGFRVL*SLTFL*NNKIFLFSFWC 293
Range 13: 377 to 469 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
66.1 bits(138) | 0.0 | 30/31(97%) | 0/31(0%) | Minus/Plus |
Query 220 NSS*ASFKRVGSHRRVGLI*FLKFPF*KRKN 312 NSS*ASFKRVGSH RVGLI*FLKFPF*KRKN Subject 377 NSS*ASFKRVGSHCRVGLI*FLKFPF*KRKN 469
Range 14: 586 to 687 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
43.7 bits(89) | 0.0 | 34/34(100%) | 0/34(0%) | Minus/Plus |
Query 2 NT*EFLPKIQXXXXXXXXXXXXLREVCPSSSVVL 103 NT*EFLPKIQLLSFSSFKFSCCLREVCPSSSVVL Subject 586 NT*EFLPKIQLLSFSSFKFSCCLREVCPSSSVVL 687
Range 15: 354 to 389 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
28.1 bits(55) | 0.0 | 12/12(100%) | 0/12(0%) | Minus/Plus |
Query 300 CASAS*VLTLPK 335 CASAS*VLTLPK Subject 354 CASAS*VLTLPK 389
Range 16: 196 to 327 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
104.6 bits(222) | 0.0 | 41/44(93%) | 0/44(0%) | Plus/Minus |
Query 362 DSRKVNNY*TRNTKKRREKFCYFKGKLMTTKHETPIREKKSFLL 493 DSRKVNNY*TRNTKKRREKFCYFKGKLMTTKHETPIREKK+F++ Subject 196 DSRKVNNY*TRNTKKRREKFCYFKGKLMTTKHETPIREKKNFVI 327
Range 17: 644 to 688 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
38.2 bits(77) | 0.0 | 15/15(100%) | 0/15(0%) | Plus/Minus |
Query 1 EGRRKKKGKLPSNSR 45 EGRRKKKGKLPSNSR Subject 644 EGRRKKKGKLPSNSR 688
Range 18: 203 to 271 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.9 bits(107) | 0.0 | 22/23(96%) | 0/23(0%) | Minus/Plus |
Query 418 KDFFSLIGVSCFVVINFPLK*QN 486 K FFSLIGVSCFVVINFPLK*QN Subject 203 KFFFSLIGVSCFVVINFPLK*QN 271
Range 19: 432 to 470 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
33.6 bits(67) | 0.0 | 13/13(100%) | 0/13(0%) | Minus/Plus |
Query 219 FSF*NFPFKKEKT 257 FSF*NFPFKKEKT Subject 432 FSF*NFPFKKEKT 470
Range 20: 654 to 686 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
30.9 bits(61) | 0.0 | 11/11(100%) | 0/11(0%) | Minus/Plus |
Query 3 EGSLPFFFRRP 35 EGSLPFFFRRP Subject 654 EGSLPFFFRRP 686
Range 21: 138 to 332 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.9 bits(107) | 0.0 | 31/65(48%) | 0/65(0%) | Plus/Minus |
Query 292 KRRLGRVKT*DAEAQRKLNTNLNRL*ES**LLNTKHQKEKRKILLF*RKVNDYKTRNPNKRKEIF 486 K+ LG++ T E ++ N L ES**L NTK Q EKRKILLF*RK+ T + K K +F Subject 138 KQTLGKLITTKHETPKREEKNFVILKES**LQNTKPQ*EKRKILLF*RKITIKTTNDS*KEKFLF 332
Range 22: 403 to 432 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
24.0 bits(46) | 0.0 | 9/10(90%) | 0/10(0%) | Plus/Minus |
Query 257 INPTRR*EPT 286 INPTR+*EPT Subject 403 INPTRQ*EPT 432
Range 23: 182 to 256 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
49.6 bits(102) | 0.0 | 21/25(84%) | 0/25(0%) | Minus/Plus |
Query 368 *LSFKITKFFSSLFGVSCLVVINFP 442 * SFKITKFF SL GVSC VVINFP Subject 182 *FSFKITKFFFSLIGVSCFVVINFP 256
Range 24: 147 to 206 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
22.1 bits(42) | 0.0 | 11/20(55%) | 0/20(0%) | Minus/Plus |
Query 418 FSLIGVSCFVVINFPLK*QN 477 F L V NFPLK*QN Subject 147 FFLSAVVSSFYCNFPLK*QN 206
Range 25: 182 to 256 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.8 bits(109) | 0.0 | 20/25(80%) | 0/25(0%) | Plus/Minus |
Query 368 RKVNNY*TRNTKKRREKFCYFKGKL 442 RKVN+Y TRN KR+EKFCYFKGKL Subject 182 RKVNDYKTRNPNKRKEKFCYFKGKL 256
Range 26: 184 to 384 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.4 bits(108) | 0.0 | 29/67(43%) | 0/67(0%) | Plus/Minus |
Query 240 EILKTKLTQHDDENQPS*KTLRKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKES 440 E LK K + + +* RK N + +K + + GKL+TTKHETP RE+KNFVILKE+ Subject 184 EELKLKTRKRREN*TRT*TDSRKVNNY*TRNTKKRREKFCYFKGKLMTTKHETPIREKKNFVILKEN 384
Grapevine leafroll associated virus 3 isolate 621, complete genome
Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 28
Range 1: 203 to 535 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
245.8 bits(530) | 0.0 | 109/111(98%) | 0/111(0%) | Plus/Minus |
Query 154 NIFKLVKENYEKTENKALKENDVFSFLKGKF*KLN*PNTTMRTNPLKRRLGRVKT*DAEAQRKLNTNLNRL*ES**LLNTKHQKEKRKILLF*RKVNDYKTRNPNKRKEIF 486 NIFKLVKENYEKTENKALKENDVFSFLKGKF*KLN*PNTTMRTNPLKRRLG+VKT*DAEAQRKLNTNLNRL*ES**LLNTKHQKEKRKILLF*RKVNDYKTRNPNKRKE F Subject 203 NIFKLVKENYEKTENKALKENDVFSFLKGKF*KLN*PNTTMRTNPLKRRLGKVKT*DAEAQRKLNTNLNRL*ES**LLNTKHQKEKRKILLF*RKVNDYKTRNPNKRKEKF 535
Range 2: 579 to 686 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.5 bits(165) | 0.0 | 36/36(100%) | 0/36(0%) | Plus/Minus |
Query 3 RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*VLLR 110 RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*VLLR Subject 579 RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*VLLR 686
Range 3: 514 to 591 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.2 bits(112) | 0.0 | 25/26(96%) | 0/26(0%) | Plus/Minus |
Query 98 GVT*ENRKSEH*D*RKLKEIFLNL*R 175 GVT*ENRKS+H*D*RKLKEIFLNL*R Subject 514 GVT*ENRKSKH*D*RKLKEIFLNL*R 591
Range 4: 160 to 219 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
33.1 bits(66) | 0.0 | 13/20(65%) | 0/20(0%) | Plus/Minus |
Query 472 RKEIFFVIFKENYNRNY*QQ 531 R++ FVI KENYN+NY*+Q Subject 160 REKKNFVILKENYNKNY*RQ 219
Range 5: 108 to 146 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
25.4 bits(49) | 0.0 | 10/13(77%) | 0/13(0%) | Plus/Minus |
Query 545 IYFCFCLGKTKT* 583 I FCF LGK KT* Subject 108 ILFCFSLGKVKT* 146
Range 6: 202 to 534 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
264.5 bits(571) | 0.0 | 110/111(99%) | 0/111(0%) | Minus/Plus |
Query 155 KRFLFSYWGFVFCSH*LSFKITKFFSSLFGVSCLVVINFPRVCLGSCLVFSALPRLKF*LFLSVF*EGWFSSSCWVNLVFKISLLKKKKRHFLLVLCFPFFRSFPSQV*KY 487 K FLFSYWGFVFCSH*LSFKITKFFSSLFGVSCLVVINFPRVCLGSCLVFSALPRLKF*LFLSVF*EGWFSSSCWVNLVFKISLLKKKKRHFLLVLCFPFFRSFPSQV*KY Subject 202 KIFLFSYWGFVFCSH*LSFKITKFFSSLFGVSCLVVINFPRVCLGSCLVFSALPRLKF*LFLSVF*EGWFSSSCWVNLVFKISLLKKKKRHFLLVLCFPFFRSFPSQV*KY 534
Range 7: 644 to 688 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
35.0 bits(70) | 0.0 | 15/15(100%) | 0/15(0%) | Minus/Plus |
Query 1 PAV*GKFALLLPSSF 45 PAV*GKFALLLPSSF Subject 644 PAV*GKFALLLPSSF 688
Range 8: 579 to 620 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
32.2 bits(64) | 0.0 | 14/14(100%) | 0/14(0%) | Minus/Plus |
Query 69 PK*HLGIST*DSTS 110 PK*HLGIST*DSTS Subject 579 PK*HLGIST*DSTS 620
Range 9: 195 to 533 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
217.3 bits(468) | 0.0 | 108/113(96%) | 0/113(0%) | Plus/Minus |
Query 156 YF*TCEGKLRKNGKQSTXXXXXXXXXXXEILKTKLTQHDDENQPS*KTLRKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKES**LQNTKPQ*EKRNLFCY 494 YF*TCEGKLRKNGKQSTKRK*RFFFFKREILKTKLTQHDDENQPS*KTLRKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKES**LQNTKPQ*EKR + + Subject 195 YF*TCEGKLRKNGKQSTKRK*RFFFFKREILKTKLTQHDDENQPS*KTLRKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKES**LQNTKPQ*EKRKILLF 533
Range 10: 643 to 687 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.0 bits(81) | 0.0 | 15/15(100%) | 0/15(0%) | Plus/Minus |
Query 2 KDDGRRRANFPQTAG 46 KDDGRRRANFPQTAG Subject 643 KDDGRRRANFPQTAG 687
Range 11: 578 to 598 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
22.1 bits(42) | 0.0 | 7/7(100%) | 0/7(0%) | Plus/Minus |
Query 91 IPRCYLG 111 IPRCYLG Subject 578 IPRCYLG 598
Range 12: 201 to 293 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
67.0 bits(140) | 0.0 | 28/31(90%) | 0/31(0%) | Minus/Plus |
Query 396 KKISFLLLGFRVL*SLTFL*NNKIFLFSFWC 488 + SFLLLGFRVL*SLTFL*NNKIFLFSFWC Subject 201 QNFSFLLLGFRVL*SLTFL*NNKIFLFSFWC 293
Range 13: 377 to 469 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
67.0 bits(140) | 0.0 | 30/31(97%) | 0/31(0%) | Minus/Plus |
Query 220 NSS*ASFKRVGSHRRVGLI*FLKFPF*KRKN 312 N S*ASFKRVGSHRRVGLI*FLKFPF*KRKN Subject 377 NFS*ASFKRVGSHRRVGLI*FLKFPF*KRKN 469
Range 14: 586 to 687 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
43.7 bits(89) | 0.0 | 34/34(100%) | 0/34(0%) | Minus/Plus |
Query 2 NT*EFLPKIQXXXXXXXXXXXXLREVCPSSSVVL 103 NT*EFLPKIQLLSFSSFKFSCCLREVCPSSSVVL Subject 586 NT*EFLPKIQLLSFSSFKFSCCLREVCPSSSVVL 687
Range 15: 354 to 389 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
26.3 bits(51) | 0.0 | 11/12(92%) | 0/12(0%) | Minus/Plus |
Query 300 CASAS*VLTLPK 335 CASAS*VLT PK Subject 354 CASAS*VLTFPK 389
Range 16: 196 to 327 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
104.6 bits(222) | 0.0 | 41/44(93%) | 0/44(0%) | Plus/Minus |
Query 362 DSRKVNNY*TRNTKKRREKFCYFKGKLMTTKHETPIREKKSFLL 493 DSRKVNNY*TRNTKKRREKFCYFKGKLMTTKHETPIREKK+F++ Subject 196 DSRKVNNY*TRNTKKRREKFCYFKGKLMTTKHETPIREKKNFVI 327
Range 17: 644 to 688 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
38.2 bits(77) | 0.0 | 15/15(100%) | 0/15(0%) | Plus/Minus |
Query 1 EGRRKKKGKLPSNSR 45 EGRRKKKGKLPSNSR Subject 644 EGRRKKKGKLPSNSR 688
Range 18: 403 to 432 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
25.8 bits(50) | 0.0 | 10/10(100%) | 0/10(0%) | Plus/Minus |
Query 257 INPTRR*EPT 286 INPTRR*EPT Subject 403 INPTRR*EPT 432
Range 19: 203 to 271 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.9 bits(107) | 0.0 | 22/23(96%) | 0/23(0%) | Minus/Plus |
Query 418 KDFFSLIGVSCFVVINFPLK*QN 486 K FFSLIGVSCFVVINFPLK*QN Subject 203 KFFFSLIGVSCFVVINFPLK*QN 271
Range 20: 432 to 470 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
33.6 bits(67) | 0.0 | 13/13(100%) | 0/13(0%) | Minus/Plus |
Query 219 FSF*NFPFKKEKT 257 FSF*NFPFKKEKT Subject 432 FSF*NFPFKKEKT 470
Range 21: 654 to 686 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
30.9 bits(61) | 0.0 | 11/11(100%) | 0/11(0%) | Minus/Plus |
Query 3 EGSLPFFFRRP 35 EGSLPFFFRRP Subject 654 EGSLPFFFRRP 686
Range 22: 134 to 256 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.2 bits(112) | 0.0 | 24/41(59%) | 0/41(0%) | Plus/Minus |
Query 368 RKVNNY*TRNTKKRREKFCYFKGKLMTTKHETPIREKKSFL 490 RKVN+Y TRN KR+EKFCYFKGKL T R+K F+ Subject 134 RKVNDYKTRNPNKRKEKFCYFKGKLQ*KLLTTAERKKFYFV 256
Range 23: 182 to 256 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
49.6 bits(102) | 0.0 | 21/25(84%) | 0/25(0%) | Minus/Plus |
Query 368 *LSFKITKFFSSLFGVSCLVVINFP 442 * SFKITKFF SL GVSC VVINFP Subject 182 *FSFKITKFFFSLIGVSCFVVINFP 256
Range 24: 147 to 206 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
22.1 bits(42) | 0.0 | 11/20(55%) | 0/20(0%) | Minus/Plus |
Query 418 FSLIGVSCFVVINFPLK*QN 477 F L V NFPLK*QN Subject 147 FFLSAVVSSFYCNFPLK*QN 206
Range 25: 184 to 384 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.4 bits(108) | 0.0 | 29/67(43%) | 0/67(0%) | Plus/Minus |
Query 240 EILKTKLTQHDDENQPS*KTLRKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKES 440 E LK K + + +* RK N + +K + + GKL+TTKHETP RE+KNFVILKE+ Subject 184 EKLKLKTRKRREN*TRT*TDSRKVNNY*TRNTKKRREKFCYFKGKLMTTKHETPIREKKNFVILKEN 384
Range 26: 138 to 332 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.9 bits(107) | 0.0 | 31/65(48%) | 0/65(0%) | Plus/Minus |
Query 292 KRRLGRVKT*DAEAQRKLNTNLNRL*ES**LLNTKHQKEKRKILLF*RKVNDYKTRNPNKRKEIF 486 K+ LG++ T E ++ N L ES**L NTK Q EKRKILLF*RK+ T + K K +F Subject 138 KQTLGKLITTKHETPKREEKNFVILKES**LQNTKPQ*EKRKILLF*RKITIKTTNDS*KEKILF 332
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 28
Range 1: 203 to 535 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
244.8 bits(528) | 0.0 | 109/111(98%) | 0/111(0%) | Plus/Minus |
Query 154 NIFKLVKENYEKTENKALKENDVFSFLKGKF*KLN*PNTTMRTNPLKRRLGRVKT*DAEAQRKLNTNLNRL*ES**LLNTKHQKEKRKILLF*RKVNDYKTRNPNKRKEIF 486 NIFKLVKENYEKTENKALKENDVFSFLKGKF*KLN*PNTTMRTNPLKRRLGRVKT*DAEAQRKLNTNLNRL*ES**LLNTKHQKEKRKILLF*RKVN+YKTRNPNKRKE F Subject 203 NIFKLVKENYEKTENKALKENDVFSFLKGKF*KLN*PNTTMRTNPLKRRLGRVKT*DAEAQRKLNTNLNRL*ES**LLNTKHQKEKRKILLF*RKVNNYKTRNPNKRKEKF 535
Range 2: 579 to 686 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.5 bits(165) | 0.0 | 36/36(100%) | 0/36(0%) | Plus/Minus |
Query 3 RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*VLLR 110 RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*VLLR Subject 579 RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*VLLR 686
Range 3: 514 to 591 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.2 bits(112) | 0.0 | 25/26(96%) | 0/26(0%) | Plus/Minus |
Query 98 GVT*ENRKSEH*D*RKLKEIFLNL*R 175 GVT*ENRKS+H*D*RKLKEIFLNL*R Subject 514 GVT*ENRKSKH*D*RKLKEIFLNL*R 591
Range 4: 160 to 219 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
33.1 bits(66) | 0.0 | 13/20(65%) | 0/20(0%) | Plus/Minus |
Query 472 RKEIFFVIFKENYNRNY*QQ 531 R++ FVI KENYN+NY*+Q Subject 160 REKKNFVILKENYNKNY*RQ 219
Range 5: 108 to 146 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
25.4 bits(49) | 0.0 | 10/13(77%) | 0/13(0%) | Plus/Minus |
Query 545 IYFCFCLGKTKT* 583 I FCF LGK KT* Subject 108 ILFCFSLGKVKT* 146
Range 6: 202 to 534 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
261.8 bits(565) | 0.0 | 109/111(98%) | 0/111(0%) | Minus/Plus |
Query 155 KRFLFSYWGFVFCSH*LSFKITKFFSSLFGVSCLVVINFPRVCLGSCLVFSALPRLKF*LFLSVF*EGWFSSSCWVNLVFKISLLKKKKRHFLLVLCFPFFRSFPSQV*KY 487 K FLFSYWGFVFCS+*LSFKITKFFSSLFGVSCLVVINFPRVCLGSCLVFSALPRLKF*LFLSVF*EGWFSSSCWVNLVFKISLLKKKKRHFLLVLCFPFFRSFPSQV*KY Subject 202 KIFLFSYWGFVFCSY*LSFKITKFFSSLFGVSCLVVINFPRVCLGSCLVFSALPRLKF*LFLSVF*EGWFSSSCWVNLVFKISLLKKKKRHFLLVLCFPFFRSFPSQV*KY 534
Range 7: 644 to 688 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
35.0 bits(70) | 0.0 | 15/15(100%) | 0/15(0%) | Minus/Plus |
Query 1 PAV*GKFALLLPSSF 45 PAV*GKFALLLPSSF Subject 644 PAV*GKFALLLPSSF 688
Range 8: 579 to 620 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
32.2 bits(64) | 0.0 | 14/14(100%) | 0/14(0%) | Minus/Plus |
Query 69 PK*HLGIST*DSTS 110 PK*HLGIST*DSTS Subject 579 PK*HLGIST*DSTS 620
Range 9: 195 to 533 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
217.3 bits(468) | 0.0 | 108/113(96%) | 0/113(0%) | Plus/Minus |
Query 156 YF*TCEGKLRKNGKQSTXXXXXXXXXXXEILKTKLTQHDDENQPS*KTLRKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKES**LQNTKPQ*EKRNLFCY 494 YF*TCEGKLRKNGKQSTKRK*RFFFFKREILKTKLTQHDDENQPS*KTLRKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKES**LQNTKPQ*EKR + + Subject 195 YF*TCEGKLRKNGKQSTKRK*RFFFFKREILKTKLTQHDDENQPS*KTLRKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKES**LQNTKPQ*EKRKILLF 533
Range 10: 643 to 687 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.0 bits(81) | 0.0 | 15/15(100%) | 0/15(0%) | Plus/Minus |
Query 2 KDDGRRRANFPQTAG 46 KDDGRRRANFPQTAG Subject 643 KDDGRRRANFPQTAG 687
Range 11: 578 to 598 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
22.1 bits(42) | 0.0 | 7/7(100%) | 0/7(0%) | Plus/Minus |
Query 91 IPRCYLG 111 IPRCYLG Subject 578 IPRCYLG 598
Range 12: 377 to 469 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
69.8 bits(146) | 0.0 | 31/31(100%) | 0/31(0%) | Minus/Plus |
Query 220 NSS*ASFKRVGSHRRVGLI*FLKFPF*KRKN 312 NSS*ASFKRVGSHRRVGLI*FLKFPF*KRKN Subject 377 NSS*ASFKRVGSHRRVGLI*FLKFPF*KRKN 469
Range 13: 201 to 293 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
64.3 bits(134) | 0.0 | 27/31(87%) | 0/31(0%) | Minus/Plus |
Query 396 KKISFLLLGFRVL*SLTFL*NNKIFLFSFWC 488 + SFLLLGFRVL* LTFL*NNKIFLFSFWC Subject 201 QNFSFLLLGFRVL*LLTFL*NNKIFLFSFWC 293
Range 14: 586 to 687 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
43.7 bits(89) | 0.0 | 34/34(100%) | 0/34(0%) | Minus/Plus |
Query 2 NT*EFLPKIQXXXXXXXXXXXXLREVCPSSSVVL 103 NT*EFLPKIQLLSFSSFKFSCCLREVCPSSSVVL Subject 586 NT*EFLPKIQLLSFSSFKFSCCLREVCPSSSVVL 687
Range 15: 354 to 389 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
28.1 bits(55) | 0.0 | 12/12(100%) | 0/12(0%) | Minus/Plus |
Query 300 CASAS*VLTLPK 335 CASAS*VLTLPK Subject 354 CASAS*VLTLPK 389
Range 16: 196 to 327 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
102.8 bits(218) | 0.0 | 40/44(91%) | 0/44(0%) | Plus/Minus |
Query 362 DSRKVNNY*TRNTKKRREKFCYFKGKLMTTKHETPIREKKSFLL 493 DSRKVNNY*TRNTKKRREKFCYFKGKL+TTKHETPIREKK+F++ Subject 196 DSRKVNNY*TRNTKKRREKFCYFKGKLITTKHETPIREKKNFVI 327
Range 17: 644 to 688 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
38.2 bits(77) | 0.0 | 15/15(100%) | 0/15(0%) | Plus/Minus |
Query 1 EGRRKKKGKLPSNSR 45 EGRRKKKGKLPSNSR Subject 644 EGRRKKKGKLPSNSR 688
Range 18: 403 to 432 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
25.8 bits(50) | 0.0 | 10/10(100%) | 0/10(0%) | Plus/Minus |
Query 257 INPTRR*EPT 286 INPTRR*EPT Subject 403 INPTRR*EPT 432
Range 19: 203 to 271 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.9 bits(107) | 0.0 | 22/23(96%) | 0/23(0%) | Minus/Plus |
Query 418 KDFFSLIGVSCFVVINFPLK*QN 486 K FFSLIGVSCFVVINFPLK*QN Subject 203 KFFFSLIGVSCFVVINFPLK*QN 271
Range 20: 432 to 470 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
33.6 bits(67) | 0.0 | 13/13(100%) | 0/13(0%) | Minus/Plus |
Query 219 FSF*NFPFKKEKT 257 FSF*NFPFKKEKT Subject 432 FSF*NFPFKKEKT 470
Range 21: 654 to 686 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
30.9 bits(61) | 0.0 | 11/11(100%) | 0/11(0%) | Minus/Plus |
Query 3 EGSLPFFFRRP 35 EGSLPFFFRRP Subject 654 EGSLPFFFRRP 686
Range 22: 134 to 256 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
56.5 bits(117) | 0.0 | 25/41(61%) | 0/41(0%) | Plus/Minus |
Query 368 RKVNNY*TRNTKKRREKFCYFKGKLMTTKHETPIREKKSFL 490 RKVNNY TRN KR+EKFCYFKGKL T R+K F+ Subject 134 RKVNNYKTRNPNKRKEKFCYFKGKLQ*KLLTTAERKKFYFV 256
Range 23: 184 to 384 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.8 bits(111) | 0.0 | 30/67(45%) | 0/67(0%) | Plus/Minus |
Query 240 EILKTKLTQHDDENQPS*KTLRKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKES 440 E LK K + + +* RK N + +K + + GKLITTKHETP RE+KNFVILKE+ Subject 184 EELKLKTRKRREN*TRT*TDSRKVNNY*TRNTKKRREKFCYFKGKLITTKHETPIREKKNFVILKEN 384
Range 24: 182 to 256 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
49.6 bits(102) | 0.0 | 21/25(84%) | 0/25(0%) | Minus/Plus |
Query 368 *LSFKITKFFSSLFGVSCLVVINFP 442 * SFKITKFF SL GVSC VVINFP Subject 182 *FSFKITKFFFSLIGVSCFVVINFP 256
Range 25: 147 to 206 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
22.1 bits(42) | 0.0 | 11/20(55%) | 0/20(0%) | Minus/Plus |
Query 418 FSLIGVSCFVVINFPLK*QN 477 F L V NFPLK*QN Subject 147 FFLSAVVSSFYCNFPLK*QN 206
Range 26: 138 to 332 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.9 bits(107) | 0.0 | 31/65(48%) | 0/65(0%) | Plus/Minus |
Query 292 KRRLGRVKT*DAEAQRKLNTNLNRL*ES**LLNTKHQKEKRKILLF*RKVNDYKTRNPNKRKEIF 486 K+ LG++ T E ++ N L ES**L NTK Q EKRKILLF*RK+ T + K K +F Subject 138 KQTLGKLITTKHETPKREEKNFVILKES**LQNTKPQ*EKRKILLF*RKITIKTTNDS*KEKILF 332
Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome
Sequence ID: KX756669.1 Length: 18313 Number of Matches: 23
Range 1: 18 to 350 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
240.7 bits(519) | 0.0 | 108/111(97%) | 0/111(0%) | Plus/Minus |
Query 154 NIFKLVKENYEKTENKALKENDVFSFLKGKF*KLN*PNTTMRTNPLKRRLGRVKT*DAEAQRKLNTNLNRL*ES**LLNTKHQKEKRKILLF*RKVNDYKTRNPNKRKEIF 486 NIFKLVKENYEKTENKALKENDVFSFLKGKF*KLN*PNTTMRTNPLKRRLGRVKT*DAEAQRKLNTNLNRL*ES**LLNTKHQKEKRKILLF*RKVNDYKTRN KRKE F Subject 18 NIFKLVKENYEKTENKALKENDVFSFLKGKF*KLN*PNTTMRTNPLKRRLGRVKT*DAEAQRKLNTNLNRL*ES**LLNTKHQKEKRKILLF*RKVNDYKTRNTKKRKEKF 350
Range 2: 394 to 501 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.5 bits(165) | 0.0 | 36/36(100%) | 0/36(0%) | Plus/Minus |
Query 3 RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*VLLR 110 RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*VLLR Subject 394 RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*VLLR 501
Range 3: 329 to 406 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.2 bits(112) | 0.0 | 25/26(96%) | 0/26(0%) | Plus/Minus |
Query 98 GVT*ENRKSEH*D*RKLKEIFLNL*R 175 GVT*ENRKS+H*D*RKLKEIFLNL*R Subject 329 GVT*ENRKSKH*D*RKLKEIFLNL*R 406
Range 4: 17 to 349 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
258.6 bits(558) | 0.0 | 108/111(97%) | 0/111(0%) | Minus/Plus |
Query 155 KRFLFSYWGFVFCSH*LSFKITKFFSSLFGVSCLVVINFPRVCLGSCLVFSALPRLKF*LFLSVF*EGWFSSSCWVNLVFKISLLKKKKRHFLLVLCFPFFRSFPSQV*KY 487 K FLFS+W FVFCSH*LSFKITKFFSSLFGVSCLVVINFPRVCLGSCLVFSALPRLKF*LFLSVF*EGWFSSSCWVNLVFKISLLKKKKRHFLLVLCFPFFRSFPSQV*KY Subject 17 KIFLFSFWCFVFCSH*LSFKITKFFSSLFGVSCLVVINFPRVCLGSCLVFSALPRLKF*LFLSVF*EGWFSSSCWVNLVFKISLLKKKKRHFLLVLCFPFFRSFPSQV*KY 349
Range 5: 459 to 503 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
35.0 bits(70) | 0.0 | 15/15(100%) | 0/15(0%) | Minus/Plus |
Query 1 PAV*GKFALLLPSSF 45 PAV*GKFALLLPSSF Subject 459 PAV*GKFALLLPSSF 503
Range 6: 394 to 435 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
32.2 bits(64) | 0.0 | 14/14(100%) | 0/14(0%) | Minus/Plus |
Query 69 PK*HLGIST*DSTS 110 PK*HLGIST*DSTS Subject 394 PK*HLGIST*DSTS 435
Range 7: 10 to 348 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
210.9 bits(454) | 0.0 | 106/113(94%) | 0/113(0%) | Plus/Minus |
Query 156 YF*TCEGKLRKNGKQSTXXXXXXXXXXXEILKTKLTQHDDENQPS*KTLRKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKES**LQNTKPQ*EKRNLFCY 494 YF*TCEGKLRKNGKQSTKRK*RFFFFKREILKTKLTQHDDENQPS*KTLRKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKES**LQNTK Q EKR + + Subject 10 YF*TCEGKLRKNGKQSTKRK*RFFFFKREILKTKLTQHDDENQPS*KTLRKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKES**LQNTKHQKEKRKILLF 348
Range 8: 458 to 502 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.0 bits(81) | 0.0 | 15/15(100%) | 0/15(0%) | Plus/Minus |
Query 2 KDDGRRRANFPQTAG 46 KDDGRRRANFPQTAG Subject 458 KDDGRRRANFPQTAG 502
Range 9: 393 to 413 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
22.1 bits(42) | 0.0 | 7/7(100%) | 0/7(0%) | Plus/Minus |
Query 91 IPRCYLG 111 IPRCYLG Subject 393 IPRCYLG 413
Range 10: 192 to 284 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
69.8 bits(146) | 0.0 | 31/31(100%) | 0/31(0%) | Minus/Plus |
Query 220 NSS*ASFKRVGSHRRVGLI*FLKFPF*KRKN 312 NSS*ASFKRVGSHRRVGLI*FLKFPF*KRKN Subject 192 NSS*ASFKRVGSHRRVGLI*FLKFPF*KRKN 284
Range 11: 16 to 108 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
61.1 bits(127) | 0.0 | 26/31(84%) | 0/31(0%) | Minus/Plus |
Query 396 KKISFLLLGFRVL*SLTFL*NNKIFLFSFWC 488 + SFL L FRVL*SLTFL*NNKIFLFSFWC Subject 16 QNFSFLFLVFRVL*SLTFL*NNKIFLFSFWC 108
Range 12: 401 to 502 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
43.7 bits(89) | 0.0 | 34/34(100%) | 0/34(0%) | Minus/Plus |
Query 2 NT*EFLPKIQXXXXXXXXXXXXLREVCPSSSVVL 103 NT*EFLPKIQLLSFSSFKFSCCLREVCPSSSVVL Subject 401 NT*EFLPKIQLLSFSSFKFSCCLREVCPSSSVVL 502
Range 13: 169 to 204 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
28.1 bits(55) | 0.0 | 12/12(100%) | 0/12(0%) | Minus/Plus |
Query 300 CASAS*VLTLPK 335 CASAS*VLTLPK Subject 169 CASAS*VLTLPK 204
Range 14: 11 to 142 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.4 bits(215) | 0.0 | 40/44(91%) | 0/44(0%) | Plus/Minus |
Query 362 DSRKVNNY*TRNTKKRREKFCYFKGKLMTTKHETPIREKKSFLL 493 DSRKVNNY*TRNTKKRREKFCYFKGKLMTTKHETP REKK+F++ Subject 11 DSRKVNNY*TRNTKKRREKFCYFKGKLMTTKHETPKREKKNFVI 142
Range 15: 459 to 503 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
38.2 bits(77) | 0.0 | 15/15(100%) | 0/15(0%) | Plus/Minus |
Query 1 EGRRKKKGKLPSNSR 45 EGRRKKKGKLPSNSR Subject 459 EGRRKKKGKLPSNSR 503
Range 16: 218 to 247 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
25.8 bits(50) | 0.0 | 10/10(100%) | 0/10(0%) | Plus/Minus |
Query 257 INPTRR*EPT 286 INPTRR*EPT Subject 218 INPTRR*EPT 247
Range 17: 3 to 71 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.9 bits(107) | 0.0 | 21/23(91%) | 0/23(0%) | Minus/Plus |
Query 368 SFKITKFFSSLFGVSCLVVINFP 436 SFKITKFF SLFGVSC VVINFP Subject 3 SFKITKFFFSLFGVSCFVVINFP 71
Range 18: 247 to 285 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
33.6 bits(67) | 0.0 | 13/13(100%) | 0/13(0%) | Minus/Plus |
Query 219 FSF*NFPFKKEKT 257 FSF*NFPFKKEKT Subject 247 FSF*NFPFKKEKT 285
Range 19: 469 to 501 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
30.9 bits(61) | 0.0 | 11/11(100%) | 0/11(0%) | Minus/Plus |
Query 3 EGSLPFFFRRP 35 EGSLPFFFRRP Subject 469 EGSLPFFFRRP 501
Range 20: 2 to 199 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
55.6 bits(115) | 0.0 | 30/66(45%) | 0/66(0%) | Plus/Minus |
Query 240 EILKTKLTQHDDENQPS*KTLRKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKE 437 E LK K + + +* RK N + +K + + GKL+TTKHETPKRE+KNFVILKE Subject 2 EELKLKTRKRREN*TRT*TDSRKVNNY*TRNTKKRREKFCYFKGKLMTTKHETPKREKKNFVILKE 199
Range 21: 1 to 147 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.7 bits(113) | 0.0 | 29/49(59%) | 0/49(0%) | Plus/Minus |
Query 292 KRRLGRVKT*DAEAQRKLNTNLNRL*ES**LLNTKHQKEKRKILLF*RK 438 K+ LG++ T E ++ N L ES**L NTKHQKEKRKILLF*RK Subject 1 KQTLGKLITTKHETPKREEKNFVILKES**LQNTKHQKEKRKILLF*RK 147
Grapevine leafroll associated virus 3 isolate GP18, complete genome
Sequence ID: EU259806.1 Length: 18498 Number of Matches: 16
Range 1: 138 to 467 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
120.2 bits(256) | 0.0 | 59/110(54%) | 0/110(0%) | Plus/Minus |
Query 157 IFKLVKENYEKTENKALKENDVFSFLKGKF*KLN*PNTTMRTNPLKRRLGRVKT*DAEAQRKLNTNLNRL*ES**LLNTKHQKEKRKILLF*RKVNDYKTRNPNKRKEIF 486 IFK KENY++TEN+ALKENDV K K * LN PNT RTNPLKR LG+ KT + + QRKL+ NLNR E+* + + KEK+ LLF RK T N K K F Subject 138 IFKFAKENYKETENEALKENDVVYLCKRKI*NLNLPNTIKRTNPLKRHLGKTKTKNTKTQRKLDANLNRRKEN*R*QDATY*KEKKSFLLFLRKTTTETTNNS*KEKIYF 467
Range 2: 579 to 686 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
49.6 bits(102) | 0.0 | 24/36(67%) | 0/36(0%) | Plus/Minus |
Query 3 RTTEEEGQTSLKQQENLKLEKERS*ILGRNS*VLLR 110 R T+EEGQTSLKQQEN KLEK+RS* L + *++ R Subject 579 RGTKEEGQTSLKQQEN*KLEKKRS*NLDKTP*MVRR 686
Range 3: 108 to 146 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
35.9 bits(72) | 0.0 | 13/13(100%) | 0/13(0%) | Plus/Minus |
Query 545 IYFCFCLGKTKT* 583 IYFCFCLGKTKT* Subject 108 IYFCFCLGKTKT* 146
Range 4: 182 to 469 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
111.0 bits(236) | 0.0 | 55/96(57%) | 0/96(0%) | Minus/Plus |
Query 155 *LSFKITKFFSSLFGVSCLVVINFPRVCLGSCLVFSALPRLKF*LFLSVF*EGWFSSSCWVNLVFKISLLKKKKRHFLLVLCFPFFRSFPSQV*KY 442 * S KITK SS F S LV+ NFP VCLG VF A F* FLSVF*EG FS SCWVNL F+ S K ++R FLLV FPF +FP ++*K+ Subject 182 *FSLKITKKISSPFSTSRLVIFNFPCVCLGLRQVFFASSCF*F*FFLSVF*EG*FSLSCWVNLDFRFSFYKDRQRRFLLVPRFPFLCNFPLRI*KF 469
Range 5: 579 to 686 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
24.4 bits(47) | 0.0 | 24/36(67%) | 0/36(0%) | Minus/Plus |
Query 3 PK*HLGIST*DSTSXXXXXXXXXXFEGSLPFFFRRP 110 P HLG * TSF F*F IFLLFEGSL FFF P Subject 579 PTYHLGSFI*VLTSFLF*FLIFLLFEGSLSFFFSSP 686
Range 6: 184 to 465 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
94.1 bits(199) | 0.0 | 52/94(55%) | 0/94(0%) | Plus/Minus |
Query 159 F*TCEGKLRKNGKQSTXXXXXXXXXXXEILKTKLTQHDDENQPS*KTLRKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKES 440 F* +GKL++NGK+ TKRK R +E LK+K TQHD EN PS*KTLRK+*N + A+KT +PKQT GKL T+ + K EE FVI KE+ Subject 184 F*IRKGKLQRNGKRGTKRKRRCLSL*KENLKSKFTQHDKEN*PS*KTLRKN*N*KHEDAKKT*RKPKQTQGKLKMTRRDVLKGEEIFFVIFKEN 465
Range 7: 643 to 687 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
28.1 bits(55) | 0.0 | 11/15(73%) | 0/15(0%) | Plus/Minus |
Query 2 KDDGRRRANFPQTAG 46 K + RRR NFPQTAG Subject 643 KGN*RRRTNFPQTAG 687
Range 8: 109 to 219 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
46.9 bits(96) | 0.0 | 37/37(100%) | 0/37(0%) | Minus/Plus |
Query 472 YVLVFPKQKQK*IXXXXXXXXXXXXXXLKNNKKDFFS 582 YVLVFPKQKQK*IFSFQLLLVVSVVVFLKNNKKDFFS Subject 109 YVLVFPKQKQK*IFSFQLLLVVSVVVFLKNNKKDFFS 219
Range 9: 193 to 516 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
45.1 bits(92) | 0.0 | 31/108(29%) | 0/108(0%) | Minus/Plus |
Query 173 K*QKRFLFSYWGFVFCSH*LSFKITKFFSSLFGVSCLVVINFPRVCLGSCLVFSALPRLKF*LFLSVF*EGWFSSSCWVNLVFKISLLKKKKRHFLLVLCFPFFRSFP 496 K K+ FS+ C * S ++ +F SS V +V+ FP+ L ++F L + +F*+FL * FS S ++ S K L C ++ +FP Subject 193 KNNKKDFFSF*YVASCHL*FSLRLFRFASSFLCVFVFLVLVFPKCLLRGLVLFIVLGKFRF*IFLLQR*TTSFSFSASFSVSL*FSFANLKIFLLFLFSCSIYYFNFP 516
Range 10: 644 to 676 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
23.5 bits(45) | 0.0 | 10/11(91%) | 0/11(0%) | Minus/Plus |
Query 13 PAV*GKFALLL 45 PAV*GKF LLL Subject 644 PAV*GKFVLLL 676
Range 11: 160 to 234 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
47.8 bits(98) | 0.0 | 20/25(80%) | 0/25(0%) | Plus/Minus |
Query 457 RNPNKRKEIFFVIFKENYNRNY*QQ 531 R+ K +EIFFVIFKENYNRNY*QQ Subject 160 RDVLKGEEIFFVIFKENYNRNY*QQ 234
Range 12: 108 to 215 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.9 bits(83) | 0.0 | 35/36(97%) | 0/36(0%) | Minus/Plus |
Query 476 LRLSFS*TKTKVNXXXXXXXXXXXXXFP*K*QKRFL 583 LRLSFS*TKTKVNFF SAVVSSFCCSFP*K*QKRFL Subject 108 LRLSFS*TKTKVNFFLSAVVSSFCCSFP*K*QKRFL 215
Range 13: 318 to 404 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
34.5 bits(69) | 0.0 | 19/29(66%) | 0/29(0%) | Minus/Plus |
Query 220 S*ASFKRVGSHRRVGLI*FLKFPF*KRKN 306 S* SFKRV S RVG I* L FPF K N Subject 318 S*VSFKRVSSLYRVG*I*ILDFPFTKIDN 404
Range 14: 644 to 688 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
27.6 bits(54) | 0.0 | 11/15(73%) | 0/15(0%) | Plus/Minus |
Query 1 EGRRKKKGKLPSNSR 45 +G KKK KLPSNSR Subject 644 KGELKKKDKLPSNSR 688
Range 15: 167 to 217 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
41.4 bits(84) | 0.0 | 16/17(94%) | 0/17(0%) | Plus/Minus |
Query 474 KRNLFCYF*GKLQQKLL 524 +RNLFCYF*GKLQQKLL Subject 167 RRNLFCYF*GKLQQKLL 217
Range 16: 195 to 386 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
24.9 bits(48) | 0.0 | 19/64(30%) | 0/64(0%) | Plus/Minus |
Query 303 RKS*NLRRGSAEKTKHEPKQTLGKLITTKHETPKREEKNFVILKES**LQNTKPQ*EKRNLFCY 494 RK *NL + K + K+ LGK T +T ++ + N KE+* Q+ EK++ + Subject 195 RKI*NLNLPNTIKRTNPLKRHLGKTKTKNTKTQRKLDANLNRRKEN*R*QDATY*KEKKSFLLF 386
Nucleotide Sequence (114 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
99.1 | 526.9 | 34% | 3.112e-20 | 89% | JX559645.1 | |
99.1 | 541.1 | 34% | 3.112e-20 | 92% | NC_004667.1 | |
99.1 | 541.1 | 34% | 3.112e-20 | 92% | AF037268.2 | |
99.1 | 526.9 | 34% | 3.112e-20 | 89% | GQ352631.1 | |
99.1 | 541.1 | 34% | 3.112e-20 | 92% | GU983863.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 6
Range 1: 5855 to 5968 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
99.1 bits(210) | 0.0 | 36/38(95%) | 0/38(0%) | Plus/Minus |
Query 1 LPSDRALSPDFGVIVLVTPWLCGCWFGTPGDFSSDTPP 114 LPSDRAL PDFGVIVLV PWLCGCWFGTPGDFSSDTPP Subject 5855 LPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPP 5968
Range 2: 5855 to 5968 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.0 bits(190) | 0.0 | 36/38(95%) | 0/38(0%) | Minus/Plus |
Query 1 RRRVG*EITRCSKPATTEPRCYQNNHTKIGGQGSI*GK 114 RRRVG*E+TRCSKPATTEPRCYQNNHTKI GQGSI*GK Subject 5855 RRRVG*EVTRCSKPATTEPRCYQNNHTKIRGQGSI*GK 5968
Range 3: 5857 to 5967 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
86.8 bits(183) | 0.0 | 34/37(92%) | 0/37(0%) | Minus/Plus |
Query 2 AACRMRNHQVFQTSNHRAKVLPEQSHQNRGTRLYLRE 112 AACRMR+HQVFQTSNHRAKVLPEQSHQN+G RLYLRE Subject 5857 AACRMRSHQVFQTSNHRAKVLPEQSHQNQGARLYLRE 5967
Range 4: 5857 to 5967 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
85.4 bits(180) | 0.0 | 35/37(95%) | 0/37(0%) | Plus/Minus |
Query 2 FPQIEPCPPILV*LFW*HLGSVVAGLEHLVISHPTRR 112 FPQIEPCP ILV*LFW*HLGSVVAGLEHLV SHPTRR Subject 5857 FPQIEPCPLILV*LFW*HLGSVVAGLEHLVTSHPTRR 5967
Grapevine leafroll associated virus 3, complete genome
Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 6
Range 1: 5276 to 5389 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
99.1 bits(210) | 0.0 | 36/38(95%) | 0/38(0%) | Plus/Minus |
Query 1 LPSDRALSPDFGVIVLVTPWLCGCWFGTPGDFSSDTPP 114 LPSDRAL PDFGVIVLV PWLCGCWFGTPGDFSSDTPP Subject 5276 LPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPP 5389
Range 2: 5276 to 5389 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
93.6 bits(198) | 0.0 | 37/38(97%) | 0/38(0%) | Minus/Plus |
Query 1 RRRVG*EITRCSKPATTEPRCYQNNHTKIGGQGSI*GK 114 RRRVG*E+TRCSKPATTEPRCYQNNHTKIGGQGSI*GK Subject 5276 RRRVG*EVTRCSKPATTEPRCYQNNHTKIGGQGSI*GK 5389
Range 3: 5278 to 5388 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.0 bits(190) | 0.0 | 36/37(97%) | 0/37(0%) | Plus/Minus |
Query 2 FPQIEPCPPILV*LFW*HLGSVVAGLEHLVISHPTRR 112 FPQIEPCPPILV*LFW*HLGSVVAGLEHLV SHPTRR Subject 5278 FPQIEPCPPILV*LFW*HLGSVVAGLEHLVTSHPTRR 5388
Range 4: 5277 to 5387 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
89.5 bits(189) | 0.0 | 34/37(92%) | 0/37(0%) | Plus/Minus |
Query 3 SLR*SLVPRFWCDCSGNTLALWLLVWNTW*FLIRHAA 113 SLR*SL PRFWCDCSG+TLALWLLVWNTW* LIRHAA Subject 5277 SLR*SLAPRFWCDCSGSTLALWLLVWNTW*LLIRHAA 5387
Grapevine leafroll associated virus 3, complete genome
Sequence ID: AF037268.2 Length: 17919 Number of Matches: 6
Range 1: 5276 to 5389 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
99.1 bits(210) | 0.0 | 36/38(95%) | 0/38(0%) | Plus/Minus |
Query 1 LPSDRALSPDFGVIVLVTPWLCGCWFGTPGDFSSDTPP 114 LPSDRAL PDFGVIVLV PWLCGCWFGTPGDFSSDTPP Subject 5276 LPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPP 5389
Range 2: 5276 to 5389 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
93.6 bits(198) | 0.0 | 37/38(97%) | 0/38(0%) | Minus/Plus |
Query 1 RRRVG*EITRCSKPATTEPRCYQNNHTKIGGQGSI*GK 114 RRRVG*E+TRCSKPATTEPRCYQNNHTKIGGQGSI*GK Subject 5276 RRRVG*EVTRCSKPATTEPRCYQNNHTKIGGQGSI*GK 5389
Range 3: 5278 to 5388 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.0 bits(190) | 0.0 | 36/37(97%) | 0/37(0%) | Plus/Minus |
Query 2 FPQIEPCPPILV*LFW*HLGSVVAGLEHLVISHPTRR 112 FPQIEPCPPILV*LFW*HLGSVVAGLEHLV SHPTRR Subject 5278 FPQIEPCPPILV*LFW*HLGSVVAGLEHLVTSHPTRR 5388
Range 4: 5277 to 5387 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
89.5 bits(189) | 0.0 | 34/37(92%) | 0/37(0%) | Plus/Minus |
Query 3 SLR*SLVPRFWCDCSGNTLALWLLVWNTW*FLIRHAA 113 SLR*SL PRFWCDCSG+TLALWLLVWNTW* LIRHAA Subject 5277 SLR*SLAPRFWCDCSGSTLALWLLVWNTW*LLIRHAA 5387
Grapevine leafroll associated virus 3 isolate 621, complete genome
Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 6
Range 1: 5855 to 5968 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
99.1 bits(210) | 0.0 | 36/38(95%) | 0/38(0%) | Plus/Minus |
Query 1 LPSDRALSPDFGVIVLVTPWLCGCWFGTPGDFSSDTPP 114 LPSDRAL PDFGVIVLV PWLCGCWFGTPGDFSSDTPP Subject 5855 LPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPP 5968
Range 2: 5855 to 5968 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.0 bits(190) | 0.0 | 36/38(95%) | 0/38(0%) | Minus/Plus |
Query 1 RRRVG*EITRCSKPATTEPRCYQNNHTKIGGQGSI*GK 114 RRRVG*E+TRCSKPATTEPRCYQNNHTKI GQGSI*GK Subject 5855 RRRVG*EVTRCSKPATTEPRCYQNNHTKIRGQGSI*GK 5968
Range 3: 5857 to 5967 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
86.8 bits(183) | 0.0 | 34/37(92%) | 0/37(0%) | Minus/Plus |
Query 2 AACRMRNHQVFQTSNHRAKVLPEQSHQNRGTRLYLRE 112 AACRMR+HQVFQTSNHRAKVLPEQSHQN+G RLYLRE Subject 5857 AACRMRSHQVFQTSNHRAKVLPEQSHQNQGARLYLRE 5967
Range 4: 5857 to 5967 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
85.4 bits(180) | 0.0 | 35/37(95%) | 0/37(0%) | Plus/Minus |
Query 2 FPQIEPCPPILV*LFW*HLGSVVAGLEHLVISHPTRR 112 FPQIEPCP ILV*LFW*HLGSVVAGLEHLV SHPTRR Subject 5857 FPQIEPCPLILV*LFW*HLGSVVAGLEHLVTSHPTRR 5967
Grapevine leafroll associated virus 3 isolate WA MR, complete genome
Sequence ID: GU983863.1 Length: 18498 Number of Matches: 6
Range 1: 5855 to 5968 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
99.1 bits(210) | 0.0 | 36/38(95%) | 0/38(0%) | Plus/Minus |
Query 1 LPSDRALSPDFGVIVLVTPWLCGCWFGTPGDFSSDTPP 114 LPSDRAL PDFGVIVLV PWLCGCWFGTPGDFSSDTPP Subject 5855 LPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPP 5968
Range 2: 5855 to 5968 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
93.6 bits(198) | 0.0 | 37/38(97%) | 0/38(0%) | Minus/Plus |
Query 1 RRRVG*EITRCSKPATTEPRCYQNNHTKIGGQGSI*GK 114 RRRVG*E+TRCSKPATTEPRCYQNNHTKIGGQGSI*GK Subject 5855 RRRVG*EVTRCSKPATTEPRCYQNNHTKIGGQGSI*GK 5968
Range 3: 5857 to 5967 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.0 bits(190) | 0.0 | 36/37(97%) | 0/37(0%) | Plus/Minus |
Query 2 FPQIEPCPPILV*LFW*HLGSVVAGLEHLVISHPTRR 112 FPQIEPCPPILV*LFW*HLGSVVAGLEHLV SHPTRR Subject 5857 FPQIEPCPPILV*LFW*HLGSVVAGLEHLVTSHPTRR 5967
Range 4: 5856 to 5966 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
89.5 bits(189) | 0.0 | 34/37(92%) | 0/37(0%) | Plus/Minus |
Query 3 SLR*SLVPRFWCDCSGNTLALWLLVWNTW*FLIRHAA 113 SLR*SL PRFWCDCSG+TLALWLLVWNTW* LIRHAA Subject 5856 SLR*SLAPRFWCDCSGSTLALWLLVWNTW*LLIRHAA 5966
Nucleotide Sequence (686 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
158.2 | 1878.2 | 10% | 8.395e-107 | 71% | EU259806.1 | |
155.0 | 1867.2 | 10% | 7.496e-106 | 71% | KX756668.1 | |
157.8 | 1830.5 | 10% | 2.085e-103 | 71% | KJ174518.1 | |
158.2 | 1850.2 | 10% | 5.645e-103 | 71% | GQ352632.1 | |
158.2 | 1212.5 | 9% | 1.119e-58 | 96% | KX701860.1 |
Alignments
Grapevine leafroll associated virus 3 isolate GP18, complete genome
Sequence ID: EU259806.1 Length: 18498 Number of Matches: 21
Range 1: 702 to 899 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
158.2 bits(339) | 0.0 | 65/66(98%) | 0/66(0%) | Plus/Minus |
Query 2 GTLGCEVR*LHIPCELHGCQESSYIAISLVVPNVLQGIIDMRKGENAQRTNIIHGET*KLERRGNF 199 GTLGCEVR*LHIPCELHGCQESSYIAISLVVPNVLQGIIDMRKGENAQRTN+IHGET*KLERRGNF Subject 702 GTLGCEVR*LHIPCELHGCQESSYIAISLVVPNVLQGIIDMRKGENAQRTNVIHGET*KLERRGNF 899
Range 2: 240 to 467 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
150.9 bits(323) | 0.0 | 75/76(99%) | 0/76(0%) | Plus/Minus |
Query 434 IFKFAKENYKETENEALKENDVVYLCKRKI*NLNLPNTIKRTNPLKRHLGXXXXXXXXXQRKLDANLNRRKENSR* 661 IFKFAKENYKETENEALKENDVVYLCKRKI*NLNLPNTIKRTNPLKRHLGKTKTKNTKTQRKLDANLNRRKEN R* Subject 240 IFKFAKENYKETENEALKENDVVYLCKRKI*NLNLPNTIKRTNPLKRHLGKTKTKNTKTQRKLDANLNRRKEN*R* 467
Range 3: 514 to 600 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
68.9 bits(144) | 0.0 | 29/29(100%) | 0/29(0%) | Plus/Minus |
Query 301 NSLDGT*ENRKTLTLNTPREEKPPQKR*R 387 NSLDGT*ENRKTLTLNTPREEKPPQKR*R Subject 514 NSLDGT*ENRKTLTLNTPREEKPPQKR*R 600
Range 4: 452 to 520 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.7 bits(113) | 0.0 | 23/23(100%) | 0/23(0%) | Plus/Minus |
Query 381 LKES*NSKCCN*KEIKEKFLNSQ 449 LKES*NSKCCN*KEIKEKFLNSQ Subject 452 LKES*NSKCCN*KEIKEKFLNSQ 520
Range 5: 578 to 619 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
36.3 bits(73) | 0.0 | 14/14(100%) | 0/14(0%) | Plus/Minus |
Query 282 EVKT*IKLPRWYVG 323 EVKT*IKLPRWYVG Subject 578 EVKT*IKLPRWYVG 619
Range 6: 702 to 899 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
157.8 bits(338) | 0.0 | 66/66(100%) | 0/66(0%) | Minus/Plus |
Query 2 EISSSFKFSSFAMDYVRPLRVFSFPHVNNTLEYIRYNKANSDVGAFLTAMKFTGNVKLSDFTPKSA 199 EISSSFKFSSFAMDYVRPLRVFSFPHVNNTLEYIRYNKANSDVGAFLTAMKFTGNVKLSDFTPKSA Subject 702 EISSSFKFSSFAMDYVRPLRVFSFPHVNNTLEYIRYNKANSDVGAFLTAMKFTGNVKLSDFTPKSA 899
Range 7: 454 to 600 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
125.7 bits(268) | 0.0 | 49/49(100%) | 0/49(0%) | Minus/Plus |
Query 301 ANLKIFLLFLFSCSIYYFNFPLAFLWWFFFSWCV*RECFSIFLRTI*GV 447 ANLKIFLLFLFSCSIYYFNFPLAFLWWFFFSWCV*RECFSIFLRTI*GV Subject 454 ANLKIFLLFLFSCSIYYFNFPLAFLWWFFFSWCV*RECFSIFLRTI*GV 600
Range 8: 334 to 405 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.8 bits(109) | 0.0 | 24/24(100%) | 0/24(0%) | Minus/Plus |
Query 496 RGLVLFIVLGKFRF*IFLLQR*TT 567 RGLVLFIVLGKFRF*IFLLQR*TT Subject 334 RGLVLFIVLGKFRF*IFLLQR*TT 405
Range 9: 236 to 283 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.5 bits(82) | 0.0 | 15/16(94%) | 0/16(0%) | Minus/Plus |
Query 618 LVIWNFPCVCLGLRQV 665 LVI+NFPCVCLGLRQV Subject 236 LVIFNFPCVCLGLRQV 283
Range 10: 581 to 661 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
23.1 bits(44) | 0.0 | 27/27(100%) | 0/27(0%) | Minus/Plus |
Query 240 YVPSREXXXXXXXXXXXXXXFPAV*GK 320 YVPSREFYLSFNFFSFLVFNFPAV*GK Subject 581 YVPSREFYLSFNFFSFLVFNFPAV*GK 661
Range 11: 701 to 898 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
147.2 bits(315) | 0.0 | 66/66(100%) | 0/66(0%) | Plus/Minus |
Query 3 ALLGVKSDNFTFPVNFMAVRKAPTSLLALLYLMYSKVLLT*GKEKTRNGRT*SMAKLENLKEEEIS 200 ALLGVKSDNFTFPVNFMAVRKAPTSLLALLYLMYSKVLLT*GKEKTRNGRT*SMAKLENLKEEEIS Subject 701 ALLGVKSDNFTFPVNFMAVRKAPTSLLALLYLMYSKVLLT*GKEKTRNGRT*SMAKLENLKEEEIS 898
Range 12: 235 to 402 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
119.3 bits(254) | 0.0 | 52/56(93%) | 0/56(0%) | Plus/Minus |
Query 499 CLSL*KENLKSKFTQHDKEN*PS*KTLRKN*N*KHEDAKKT*RKPKQTQGKFQITK 666 CLSL*KENLKSKFTQHDKEN*PS*KTLRKN*N*KHEDAKKT*RKPKQTQGK ++T+ Subject 235 CLSL*KENLKSKFTQHDKEN*PS*KTLRKN*N*KHEDAKKT*RKPKQTQGKLKMTR 402
Range 13: 519 to 620 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
80.8 bits(170) | 0.0 | 34/34(100%) | 0/34(0%) | Plus/Minus |
Query 281 RS*NLDKTP*MVRRKIEKHSR*THQEKKNHHKNA 382 RS*NLDKTP*MVRRKIEKHSR*THQEKKNHHKNA Subject 519 RS*NLDKTP*MVRRKIEKHSR*THQEKKNHHKNA 620
Range 14: 332 to 529 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
139.4 bits(298) | 0.0 | 65/66(98%) | 0/66(0%) | Minus/Plus |
Query 372 *EG*FSLSCWVNLDFRFSFYRDRQRRFLLVPRFPFLCNFPLRI*KXXXXXFLVAAFTILTFL*RFC 569 *EG*FSLSCWVNLDFRFSFY+DRQRRFLLVPRFPFLCNFPLRI*KFFFYFFLVAAFTILTFL*RFC Subject 332 *EG*FSLSCWVNLDFRFSFYKDRQRRFLLVPRFPFLCNFPLRI*KFFFYFFLVAAFTILTFL*RFC 529
Range 15: 727 to 900 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.6 bits(283) | 0.0 | 57/58(98%) | 0/58(0%) | Minus/Plus |
Query 1 QVSPWIMFVRCAFSPFLMSIIPWSTLGTTRLIAM*ELS*QP*SSQGM*SYLTSHPRVP 174 QVSPWI FVRCAFSPFLMSIIPWSTLGTTRLIAM*ELS*QP*SSQGM*SYLTSHPRVP Subject 727 QVSPWITFVRCAFSPFLMSIIPWSTLGTTRLIAM*ELS*QP*SSQGM*SYLTSHPRVP 900
Range 16: 579 to 611 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
28.6 bits(56) | 0.0 | 11/11(100%) | 0/11(0%) | Minus/Plus |
Query 290 PTYHLGSFI*V 322 PTYHLGSFI*V Subject 579 PTYHLGSFI*V 611
Range 17: 249 to 278 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
23.1 bits(44) | 0.0 | 10/10(100%) | 0/10(0%) | Minus/Plus |
Query 623 IFLASV*VCV 652 IFLASV*VCV Subject 249 IFLASV*VCV 278
Range 18: 728 to 898 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
131.7 bits(281) | 0.0 | 56/57(98%) | 0/57(0%) | Minus/Plus |
Query 3 KFRHGLCSSVARFLLSSCQ*YLGVH*VQQG**RCRSFPDSHEVHRECEVI*LHTQEC 173 KFRHGL SSVARFLLSSCQ*YLGVH*VQQG**RCRSFPDSHEVHRECEVI*LHTQEC Subject 728 KFRHGLRSSVARFLLSSCQ*YLGVH*VQQG**RCRSFPDSHEVHRECEVI*LHTQEC 898
Range 19: 351 to 404 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.9 bits(83) | 0.0 | 17/18(94%) | 0/18(0%) | Minus/Plus |
Query 497 YRVG*I*ILDFPFTEIDN 550 YRVG*I*ILDFPFT+IDN Subject 351 YRVG*I*ILDFPFTKIDN 404
Range 20: 736 to 900 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
137.6 bits(294) | 0.0 | 54/55(98%) | 0/55(0%) | Plus/Minus |
Query 1 RHSWV*SQITSHSL*TSWLSGKLLHRY*PCCT*CTPRYY*HEERRKRATDEHNPW 165 RHSWV*SQITSHSL*TSWLSGKLLHRY*PCCT*CTPRYY*HEERRKRATDE NPW Subject 736 RHSWV*SQITSHSL*TSWLSGKLLHRY*PCCT*CTPRYY*HEERRKRATDERNPW 900
Grapevine leafroll associated virus 3 isolate TC BR, complete genome
Sequence ID: KX756668.1 Length: 18498 Number of Matches: 21
Range 1: 702 to 899 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
155.0 bits(332) | 0.0 | 64/66(97%) | 0/66(0%) | Plus/Minus |
Query 2 GTLGCEVR*LHIPCELHGCQESSYIAISLVVPNVLQGIIDMRKGENAQRTNIIHGET*KLERRGNF 199 GTLGCEVR*LHIPCELHGCQESSYIAISLVVPNVLQGIIDMRKGENAQRTN+IHG T*KLERRGNF Subject 702 GTLGCEVR*LHIPCELHGCQESSYIAISLVVPNVLQGIIDMRKGENAQRTNVIHGGT*KLERRGNF 899
Range 2: 240 to 467 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
150.9 bits(323) | 0.0 | 75/76(99%) | 0/76(0%) | Plus/Minus |
Query 434 IFKFAKENYKETENEALKENDVVYLCKRKI*NLNLPNTIKRTNPLKRHLGXXXXXXXXXQRKLDANLNRRKENSR* 661 IFKFAKENYKETENEALKENDVVYLCKRKI*NLNLPNTIKRTNPLKRHLGKTKTKNTKTQRKLDANLNRRKEN R* Subject 240 IFKFAKENYKETENEALKENDVVYLCKRKI*NLNLPNTIKRTNPLKRHLGKTKTKNTKTQRKLDANLNRRKEN*R* 467
Range 3: 514 to 600 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
68.9 bits(144) | 0.0 | 29/29(100%) | 0/29(0%) | Plus/Minus |
Query 301 NSLDGT*ENRKTLTLNTPREEKPPQKR*R 387 NSLDGT*ENRKTLTLNTPREEKPPQKR*R Subject 514 NSLDGT*ENRKTLTLNTPREEKPPQKR*R 600
Range 4: 452 to 520 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.7 bits(113) | 0.0 | 23/23(100%) | 0/23(0%) | Plus/Minus |
Query 381 LKES*NSKCCN*KEIKEKFLNSQ 449 LKES*NSKCCN*KEIKEKFLNSQ Subject 452 LKES*NSKCCN*KEIKEKFLNSQ 520
Range 5: 578 to 619 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
36.3 bits(73) | 0.0 | 14/14(100%) | 0/14(0%) | Plus/Minus |
Query 282 EVKT*IKLPRWYVG 323 EVKT*IKLPRWYVG Subject 578 EVKT*IKLPRWYVG 619
Range 6: 702 to 899 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
154.1 bits(330) | 0.0 | 65/66(98%) | 0/66(0%) | Minus/Plus |
Query 2 EISSSFKFSSFAMDYVRPLRVFSFPHVNNTLEYIRYNKANSDVGAFLTAMKFTGNVKLSDFTPKSA 199 EISSSFKFSS AMDYVRPLRVFSFPHVNNTLEYIRYNKANSDVGAFLTAMKFTGNVKLSDFTPKSA Subject 702 EISSSFKFSSSAMDYVRPLRVFSFPHVNNTLEYIRYNKANSDVGAFLTAMKFTGNVKLSDFTPKSA 899
Range 7: 454 to 600 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
125.7 bits(268) | 0.0 | 49/49(100%) | 0/49(0%) | Minus/Plus |
Query 301 ANLKIFLLFLFSCSIYYFNFPLAFLWWFFFSWCV*RECFSIFLRTI*GV 447 ANLKIFLLFLFSCSIYYFNFPLAFLWWFFFSWCV*RECFSIFLRTI*GV Subject 454 ANLKIFLLFLFSCSIYYFNFPLAFLWWFFFSWCV*RECFSIFLRTI*GV 600
Range 8: 334 to 405 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.8 bits(109) | 0.0 | 24/24(100%) | 0/24(0%) | Minus/Plus |
Query 496 RGLVLFIVLGKFRF*IFLLQR*TT 567 RGLVLFIVLGKFRF*IFLLQR*TT Subject 334 RGLVLFIVLGKFRF*IFLLQR*TT 405
Range 9: 236 to 283 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.5 bits(82) | 0.0 | 15/16(94%) | 0/16(0%) | Minus/Plus |
Query 618 LVIWNFPCVCLGLRQV 665 LVI+NFPCVCLGLRQV Subject 236 LVIFNFPCVCLGLRQV 283
Range 10: 581 to 661 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
23.1 bits(44) | 0.0 | 27/27(100%) | 0/27(0%) | Minus/Plus |
Query 240 YVPSREXXXXXXXXXXXXXXFPAV*GK 320 YVPSREFYLSFNFFSFLVFNFPAV*GK Subject 581 YVPSREFYLSFNFFSFLVFNFPAV*GK 661
Range 11: 701 to 898 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
145.4 bits(311) | 0.0 | 65/66(98%) | 0/66(0%) | Plus/Minus |
Query 3 ALLGVKSDNFTFPVNFMAVRKAPTSLLALLYLMYSKVLLT*GKEKTRNGRT*SMAKLENLKEEEIS 200 ALLGVKSDNFTFPVNFMAVRKAPTSLLALLYLMYSKVLLT*GKEKTRNGRT*SMA+LENLKEEEIS Subject 701 ALLGVKSDNFTFPVNFMAVRKAPTSLLALLYLMYSKVLLT*GKEKTRNGRT*SMAELENLKEEEIS 898
Range 12: 235 to 402 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
119.3 bits(254) | 0.0 | 52/56(93%) | 0/56(0%) | Plus/Minus |
Query 499 CLSL*KENLKSKFTQHDKEN*PS*KTLRKN*N*KHEDAKKT*RKPKQTQGKFQITK 666 CLSL*KENLKSKFTQHDKEN*PS*KTLRKN*N*KHEDAKKT*RKPKQTQGK ++T+ Subject 235 CLSL*KENLKSKFTQHDKEN*PS*KTLRKN*N*KHEDAKKT*RKPKQTQGKLKMTR 402
Range 13: 519 to 620 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
80.8 bits(170) | 0.0 | 34/34(100%) | 0/34(0%) | Plus/Minus |
Query 281 RS*NLDKTP*MVRRKIEKHSR*THQEKKNHHKNA 382 RS*NLDKTP*MVRRKIEKHSR*THQEKKNHHKNA Subject 519 RS*NLDKTP*MVRRKIEKHSR*THQEKKNHHKNA 620
Range 14: 332 to 529 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
139.4 bits(298) | 0.0 | 65/66(98%) | 0/66(0%) | Minus/Plus |
Query 372 *EG*FSLSCWVNLDFRFSFYRDRQRRFLLVPRFPFLCNFPLRI*KXXXXXFLVAAFTILTFL*RFC 569 *EG*FSLSCWVNLDFRFSFY+DRQRRFLLVPRFPFLCNFPLRI*KFFFYFFLVAAFTILTFL*RFC Subject 332 *EG*FSLSCWVNLDFRFSFYKDRQRRFLLVPRFPFLCNFPLRI*KFFFYFFLVAAFTILTFL*RFC 529
Range 15: 728 to 898 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
131.7 bits(281) | 0.0 | 56/57(98%) | 0/57(0%) | Minus/Plus |
Query 3 KFRHGLCSSVARFLLSSCQ*YLGVH*VQQG**RCRSFPDSHEVHRECEVI*LHTQEC 173 KFRHGL SSVARFLLSSCQ*YLGVH*VQQG**RCRSFPDSHEVHRECEVI*LHTQEC Subject 728 KFRHGLRSSVARFLLSSCQ*YLGVH*VQQG**RCRSFPDSHEVHRECEVI*LHTQEC 898
Range 16: 579 to 611 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
28.6 bits(56) | 0.0 | 11/11(100%) | 0/11(0%) | Minus/Plus |
Query 290 PTYHLGSFI*V 322 PTYHLGSFI*V Subject 579 PTYHLGSFI*V 611
Range 17: 249 to 278 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
23.1 bits(44) | 0.0 | 10/10(100%) | 0/10(0%) | Minus/Plus |
Query 623 IFLASV*VCV 652 IFLASV*VCV Subject 249 IFLASV*VCV 278
Range 18: 727 to 900 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
130.3 bits(278) | 0.0 | 56/58(97%) | 0/58(0%) | Minus/Plus |
Query 1 QVSPWIMFVRCAFSPFLMSIIPWSTLGTTRLIAM*ELS*QP*SSQGM*SYLTSHPRVP 174 QV PWI FVRCAFSPFLMSIIPWSTLGTTRLIAM*ELS*QP*SSQGM*SYLTSHPRVP Subject 727 QVPPWITFVRCAFSPFLMSIIPWSTLGTTRLIAM*ELS*QP*SSQGM*SYLTSHPRVP 900
Range 19: 351 to 404 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.9 bits(83) | 0.0 | 17/18(94%) | 0/18(0%) | Minus/Plus |
Query 497 YRVG*I*ILDFPFTEIDN 550 YRVG*I*ILDFPFT+IDN Subject 351 YRVG*I*ILDFPFTKIDN 404
Range 20: 736 to 900 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
137.6 bits(294) | 0.0 | 54/55(98%) | 0/55(0%) | Plus/Minus |
Query 1 RHSWV*SQITSHSL*TSWLSGKLLHRY*PCCT*CTPRYY*HEERRKRATDEHNPW 165 RHSWV*SQITSHSL*TSWLSGKLLHRY*PCCT*CTPRYY*HEERRKRATDE NPW Subject 736 RHSWV*SQITSHSL*TSWLSGKLLHRY*PCCT*CTPRYY*HEERRKRATDERNPW 900
Grapevine leafroll associated virus 3, complete genome
Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 21
Range 1: 702 to 899 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
155.5 bits(333) | 0.0 | 64/66(97%) | 0/66(0%) | Plus/Minus |
Query 2 GTLGCEVR*LHIPCELHGCQESSYIAISLVVPNVLQGIIDMRKGENAQRTNIIHGET*KLERRGNF 199 GTLGCEVR*LHIPCELH CQESSYIAISLVVPNVLQGIIDMRKGENAQRTN+IHGET*KLERRGNF Subject 702 GTLGCEVR*LHIPCELHSCQESSYIAISLVVPNVLQGIIDMRKGENAQRTNVIHGET*KLERRGNF 899
Range 2: 240 to 467 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
146.8 bits(314) | 0.0 | 73/76(96%) | 0/76(0%) | Plus/Minus |
Query 434 IFKFAKENYKETENEALKENDVVYLCKRKI*NLNLPNTIKRTNPLKRHLGXXXXXXXXXQRKLDANLNRRKENSR* 661 IFKFAKENYKETENEALKENDVVYLCKRKI*NLNLPN IKRTNPLKRHLGKTKTKNTKT+RKLDANLNRRKEN R* Subject 240 IFKFAKENYKETENEALKENDVVYLCKRKI*NLNLPNAIKRTNPLKRHLGKTKTKNTKTRRKLDANLNRRKEN*R* 467
Range 3: 514 to 600 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
66.1 bits(138) | 0.0 | 28/29(97%) | 0/29(0%) | Plus/Minus |
Query 301 NSLDGT*ENRKTLTLNTPREEKPPQKR*R 387 NSLDGT*ENRKTLTLN PREEKPPQKR*R Subject 514 NSLDGT*ENRKTLTLNPPREEKPPQKR*R 600
Range 4: 452 to 520 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.7 bits(113) | 0.0 | 23/23(100%) | 0/23(0%) | Plus/Minus |
Query 381 LKES*NSKCCN*KEIKEKFLNSQ 449 LKES*NSKCCN*KEIKEKFLNSQ Subject 452 LKES*NSKCCN*KEIKEKFLNSQ 520
Range 5: 578 to 619 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
34.5 bits(69) | 0.0 | 13/14(93%) | 0/14(0%) | Plus/Minus |
Query 282 EVKT*IKLPRWYVG 323 EVK+*IKLPRWYVG Subject 578 EVKS*IKLPRWYVG 619
Range 6: 702 to 899 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
157.8 bits(338) | 0.0 | 66/66(100%) | 0/66(0%) | Minus/Plus |
Query 2 EISSSFKFSSFAMDYVRPLRVFSFPHVNNTLEYIRYNKANSDVGAFLTAMKFTGNVKLSDFTPKSA 199 EISSSFKFSSFAMDYVRPLRVFSFPHVNNTLEYIRYNKANSDVGAFLTAMKFTGNVKLSDFTPKSA Subject 702 EISSSFKFSSFAMDYVRPLRVFSFPHVNNTLEYIRYNKANSDVGAFLTAMKFTGNVKLSDFTPKSA 899
Range 7: 454 to 600 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
120.7 bits(257) | 0.0 | 48/49(98%) | 0/49(0%) | Minus/Plus |
Query 301 ANLKIFLLFLFSCSIYYFNFPLAFLWWFFFSWCV*RECFSIFLRTI*GV 447 ANLKIFLLFLFSCSIYYFNFPLAFLWWFFFSW V*RECFSIFLRTI*GV Subject 454 ANLKIFLLFLFSCSIYYFNFPLAFLWWFFFSWWV*RECFSIFLRTI*GV 600
Range 8: 334 to 405 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.0 bits(105) | 0.0 | 23/24(96%) | 0/24(0%) | Minus/Plus |
Query 496 RGLVLFIVLGKFRF*IFLLQR*TT 567 RGLVLFI LGKFRF*IFLLQR*TT Subject 334 RGLVLFIALGKFRF*IFLLQR*TT 405
Range 9: 236 to 283 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.5 bits(82) | 0.0 | 15/16(94%) | 0/16(0%) | Minus/Plus |
Query 618 LVIWNFPCVCLGLRQV 665 LVI+NFPCVCLGLRQV Subject 236 LVIFNFPCVCLGLRQV 283
Range 10: 581 to 661 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
23.1 bits(44) | 0.0 | 26/27(96%) | 0/27(0%) | Minus/Plus |
Query 240 YVPSREXXXXXXXXXXXXXXFPAV*GK 320 YVPSREFYL+FNFFSFLVFNFPAV*GK Subject 581 YVPSREFYLTFNFFSFLVFNFPAV*GK 661
Range 11: 701 to 898 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
145.4 bits(311) | 0.0 | 65/66(98%) | 0/66(0%) | Plus/Minus |
Query 3 ALLGVKSDNFTFPVNFMAVRKAPTSLLALLYLMYSKVLLT*GKEKTRNGRT*SMAKLENLKEEEIS 200 ALLGVKSDNFTFPVNF+AVRKAPTSLLALLYLMYSKVLLT*GKEKTRNGRT*SMAKLENLKEEEIS Subject 701 ALLGVKSDNFTFPVNFIAVRKAPTSLLALLYLMYSKVLLT*GKEKTRNGRT*SMAKLENLKEEEIS 898
Range 12: 235 to 402 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
115.6 bits(246) | 0.0 | 51/56(91%) | 0/56(0%) | Plus/Minus |
Query 499 CLSL*KENLKSKFTQHDKEN*PS*KTLRKN*N*KHEDAKKT*RKPKQTQGKFQITK 666 CLSL*KENLKSKFTQ DKEN*PS*KTLRKN*N*KHEDAKKT*RKPKQTQGK ++T+ Subject 235 CLSL*KENLKSKFTQRDKEN*PS*KTLRKN*N*KHEDAKKT*RKPKQTQGKLKMTR 402
Range 13: 519 to 620 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.0 bits(164) | 0.0 | 33/34(97%) | 0/34(0%) | Plus/Minus |
Query 281 RS*NLDKTP*MVRRKIEKHSR*THQEKKNHHKNA 382 RS* LDKTP*MVRRKIEKHSR*THQEKKNHHKNA Subject 519 RS*KLDKTP*MVRRKIEKHSR*THQEKKNHHKNA 620
Range 14: 332 to 529 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
133.9 bits(286) | 0.0 | 64/66(97%) | 0/66(0%) | Minus/Plus |
Query 372 *EG*FSLSCWVNLDFRFSFYRDRQRRFLLVPRFPFLCNFPLRI*KXXXXXFLVAAFTILTFL*RFC 569 *EG*FSLS WVNLDFRFSFY+DRQRRFLLVPRFPFLCNFPLRI*KFFFYFFLVAAFTILTFL*RFC Subject 332 *EG*FSLSRWVNLDFRFSFYKDRQRRFLLVPRFPFLCNFPLRI*KFFFYFFLVAAFTILTFL*RFC 529
Range 15: 728 to 898 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.9 bits(275) | 0.0 | 55/57(96%) | 0/57(0%) | Minus/Plus |
Query 3 KFRHGLCSSVARFLLSSCQ*YLGVH*VQQG**RCRSFPDSHEVHRECEVI*LHTQEC 173 KFRHGL SSVARFLLSSCQ*YLGVH*VQQG**RCRSFPDS+EVHRECEVI*LHTQEC Subject 728 KFRHGLRSSVARFLLSSCQ*YLGVH*VQQG**RCRSFPDSYEVHRECEVI*LHTQEC 898
Range 16: 579 to 611 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
27.2 bits(53) | 0.0 | 10/11(91%) | 0/11(0%) | Minus/Plus |
Query 290 PTYHLGSFI*V 322 PTYHLGSFI*+ Subject 579 PTYHLGSFI*L 611
Range 17: 249 to 278 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
23.1 bits(44) | 0.0 | 10/10(100%) | 0/10(0%) | Minus/Plus |
Query 623 IFLASV*VCV 652 IFLASV*VCV Subject 249 IFLASV*VCV 278
Range 18: 727 to 900 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.0 bits(273) | 0.0 | 56/58(97%) | 0/58(0%) | Minus/Plus |
Query 1 QVSPWIMFVRCAFSPFLMSIIPWSTLGTTRLIAM*ELS*QP*SSQGM*SYLTSHPRVP 174 QVSPWI FVRCAFSPFLMSIIPWSTLGTTRLIAM*ELS*Q *SSQGM*SYLTSHPRVP Subject 727 QVSPWITFVRCAFSPFLMSIIPWSTLGTTRLIAM*ELS*QL*SSQGM*SYLTSHPRVP 900
Range 19: 351 to 404 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.9 bits(83) | 0.0 | 17/18(94%) | 0/18(0%) | Minus/Plus |
Query 497 YRVG*I*ILDFPFTEIDN 550 YRVG*I*ILDFPFT+IDN Subject 351 YRVG*I*ILDFPFTKIDN 404
Range 20: 736 to 900 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
130.7 bits(279) | 0.0 | 53/55(96%) | 0/55(0%) | Plus/Minus |
Query 1 RHSWV*SQITSHSL*TSWLSGKLLHRY*PCCT*CTPRYY*HEERRKRATDEHNPW 165 RHSWV*SQITSHSL*TS LSGKLLHRY*PCCT*CTPRYY*HEERRKRATDE NPW Subject 736 RHSWV*SQITSHSL*TS*LSGKLLHRY*PCCT*CTPRYY*HEERRKRATDERNPW 900
Grapevine leafroll associated virus 3 isolate 623, complete genome
Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 21
Range 1: 702 to 899 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
158.2 bits(339) | 0.0 | 65/66(98%) | 0/66(0%) | Plus/Minus |
Query 2 GTLGCEVR*LHIPCELHGCQESSYIAISLVVPNVLQGIIDMRKGENAQRTNIIHGET*KLERRGNF 199 GTLGCEVR*LHIPCELHGCQESSYIAISLVVPNVLQGIIDMRKGENAQRTN+IHGET*KLERRGNF Subject 702 GTLGCEVR*LHIPCELHGCQESSYIAISLVVPNVLQGIIDMRKGENAQRTNVIHGET*KLERRGNF 899
Range 2: 240 to 467 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
150.9 bits(323) | 0.0 | 75/76(99%) | 0/76(0%) | Plus/Minus |
Query 434 IFKFAKENYKETENEALKENDVVYLCKRKI*NLNLPNTIKRTNPLKRHLGXXXXXXXXXQRKLDANLNRRKENSR* 661 IFKFAKENYKETENEALKENDVVYLCKRKI*NLNLPNTIKRTNPLKRHLGKTKTKNTKTQRKLDANLNRRKEN R* Subject 240 IFKFAKENYKETENEALKENDVVYLCKRKI*NLNLPNTIKRTNPLKRHLGKTKTKNTKTQRKLDANLNRRKEN*R* 467
Range 3: 519 to 620 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
80.8 bits(170) | 0.0 | 34/34(100%) | 0/34(0%) | Plus/Minus |
Query 281 RS*NLDKTP*MVRRKIEKHSR*THQEKKNHHKNA 382 RS*NLDKTP*MVRRKIEKHSR*THQEKKNHHKNA Subject 519 RS*NLDKTP*MVRRKIEKHSR*THQEKKNHHKNA 620
Range 4: 452 to 520 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
47.8 bits(98) | 0.0 | 21/23(91%) | 0/23(0%) | Plus/Minus |
Query 381 LKES*NSKCCN*KEIKEKFLNSQ 449 LKE+*NSKC N*KEIKEKFLNSQ Subject 452 LKEN*NSKCRN*KEIKEKFLNSQ 520
Range 5: 702 to 899 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
156.4 bits(335) | 0.0 | 65/66(98%) | 0/66(0%) | Minus/Plus |
Query 2 EISSSFKFSSFAMDYVRPLRVFSFPHVNNTLEYIRYNKANSDVGAFLTAMKFTGNVKLSDFTPKSA 199 EISSSFKFSSFAMDYVRPLRVFSFPHVNNTLEYIRYNKANSDVGAFLT+MKFTGNVKLSDFTPKSA Subject 702 EISSSFKFSSFAMDYVRPLRVFSFPHVNNTLEYIRYNKANSDVGAFLTSMKFTGNVKLSDFTPKSA 899
Range 6: 454 to 600 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.9 bits(264) | 0.0 | 48/49(98%) | 0/49(0%) | Minus/Plus |
Query 301 ANLKIFLLFLFSCSIYYFNFPLAFLWWFFFSWCV*RECFSIFLRTI*GV 447 ANLKIFLLFLFSC IYYFNFPLAFLWWFFFSWCV*RECFSIFLRTI*GV Subject 454 ANLKIFLLFLFSCGIYYFNFPLAFLWWFFFSWCV*RECFSIFLRTI*GV 600
Range 7: 334 to 405 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.8 bits(109) | 0.0 | 24/24(100%) | 0/24(0%) | Minus/Plus |
Query 496 RGLVLFIVLGKFRF*IFLLQR*TT 567 RGLVLFIVLGKFRF*IFLLQR*TT Subject 334 RGLVLFIVLGKFRF*IFLLQR*TT 405
Range 8: 236 to 283 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.5 bits(82) | 0.0 | 15/16(94%) | 0/16(0%) | Minus/Plus |
Query 618 LVIWNFPCVCLGLRQV 665 LVI+NFPCVCLGLRQV Subject 236 LVIFNFPCVCLGLRQV 283
Range 9: 581 to 661 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
23.1 bits(44) | 0.0 | 26/27(96%) | 0/27(0%) | Minus/Plus |
Query 240 YVPSREXXXXXXXXXXXXXXFPAV*GK 320 YVPSRE YLSFNFFSFLVFNFPAV*GK Subject 581 YVPSRESYLSFNFFSFLVFNFPAV*GK 661
Range 10: 701 to 898 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.5 bits(309) | 0.0 | 65/66(98%) | 0/66(0%) | Plus/Minus |
Query 3 ALLGVKSDNFTFPVNFMAVRKAPTSLLALLYLMYSKVLLT*GKEKTRNGRT*SMAKLENLKEEEIS 200 ALLGVKSDNFTFPVNFM VRKAPTSLLALLYLMYSKVLLT*GKEKTRNGRT*SMAKLENLKEEEIS Subject 701 ALLGVKSDNFTFPVNFMDVRKAPTSLLALLYLMYSKVLLT*GKEKTRNGRT*SMAKLENLKEEEIS 898
Range 11: 235 to 402 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
119.3 bits(254) | 0.0 | 52/56(93%) | 0/56(0%) | Plus/Minus |
Query 499 CLSL*KENLKSKFTQHDKEN*PS*KTLRKN*N*KHEDAKKT*RKPKQTQGKFQITK 666 CLSL*KENLKSKFTQHDKEN*PS*KTLRKN*N*KHEDAKKT*RKPKQTQGK ++T+ Subject 235 CLSL*KENLKSKFTQHDKEN*PS*KTLRKN*N*KHEDAKKT*RKPKQTQGKLKMTR 402
Range 12: 514 to 600 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
66.6 bits(139) | 0.0 | 28/29(97%) | 0/29(0%) | Plus/Minus |
Query 301 NSLDGT*ENRKTLTLNTPREEKPPQKR*R 387 +SLDGT*ENRKTLTLNTPREEKPPQKR*R Subject 514 DSLDGT*ENRKTLTLNTPREEKPPQKR*R 600
Range 13: 578 to 619 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
35.0 bits(70) | 0.0 | 13/14(93%) | 0/14(0%) | Plus/Minus |
Query 282 EVKT*IKLPRWYVG 323 EVKT*I+LPRWYVG Subject 578 EVKT*IRLPRWYVG 619
Range 14: 332 to 529 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
136.7 bits(292) | 0.0 | 64/66(97%) | 0/66(0%) | Minus/Plus |
Query 372 *EG*FSLSCWVNLDFRFSFYRDRQRRFLLVPRFPFLCNFPLRI*KXXXXXFLVAAFTILTFL*RFC 569 *EG*FSLSCWVNLDFRFSFY+DRQRRFLLVPRFPFLCNFPLRI*KFFFYFFLVAAFTIL FL*RFC Subject 332 *EG*FSLSCWVNLDFRFSFYKDRQRRFLLVPRFPFLCNFPLRI*KFFFYFFLVAAFTILIFL*RFC 529
Range 15: 727 to 900 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
130.3 bits(278) | 0.0 | 56/58(97%) | 0/58(0%) | Minus/Plus |
Query 1 QVSPWIMFVRCAFSPFLMSIIPWSTLGTTRLIAM*ELS*QP*SSQGM*SYLTSHPRVP 174 QVSPWI FVRCAFSPFLMSIIPWSTLGTTRLIAM*ELS* P*SSQGM*SYLTSHPRVP Subject 727 QVSPWITFVRCAFSPFLMSIIPWSTLGTTRLIAM*ELS*HP*SSQGM*SYLTSHPRVP 900
Range 16: 579 to 611 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
25.8 bits(50) | 0.0 | 10/11(91%) | 0/11(0%) | Minus/Plus |
Query 290 PTYHLGSFI*V 322 PTYHLGS I*V Subject 579 PTYHLGSLI*V 611
Range 17: 249 to 278 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
23.1 bits(44) | 0.0 | 10/10(100%) | 0/10(0%) | Minus/Plus |
Query 623 IFLASV*VCV 652 IFLASV*VCV Subject 249 IFLASV*VCV 278
Range 18: 728 to 898 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.9 bits(275) | 0.0 | 55/57(96%) | 0/57(0%) | Minus/Plus |
Query 3 KFRHGLCSSVARFLLSSCQ*YLGVH*VQQG**RCRSFPDSHEVHRECEVI*LHTQEC 173 KFRHGL SSVARFLLSSCQ*YLGVH*VQQG**RCRSFPD HEVHRECEVI*LHTQEC Subject 728 KFRHGLRSSVARFLLSSCQ*YLGVH*VQQG**RCRSFPDIHEVHRECEVI*LHTQEC 898
Range 19: 351 to 404 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.9 bits(83) | 0.0 | 17/18(94%) | 0/18(0%) | Minus/Plus |
Query 497 YRVG*I*ILDFPFTEIDN 550 YRVG*I*ILDFPFT+IDN Subject 351 YRVG*I*ILDFPFTKIDN 404
Range 20: 736 to 900 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
136.7 bits(292) | 0.0 | 53/55(96%) | 0/55(0%) | Plus/Minus |
Query 1 RHSWV*SQITSHSL*TSWLSGKLLHRY*PCCT*CTPRYY*HEERRKRATDEHNPW 165 RHSWV*SQITSHSL*TSW+SGKLLHRY*PCCT*CTPRYY*HEERRKRATDE NPW Subject 736 RHSWV*SQITSHSL*TSWMSGKLLHRY*PCCT*CTPRYY*HEERRKRATDERNPW 900
Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome
Sequence ID: KX701860.1 Length: 18020 Number of Matches: 13
Range 1: 220 to 417 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
155.5 bits(333) | 0.0 | 65/66(98%) | 0/66(0%) | Minus/Plus |
Query 2 EISSSFKFSSFAMDYVRPLRVFSFPHVNNTLEYIRYNKANSDVGAFLTAMKFTGNVKLSDFTPKSA 199 EISSSFKFSSFAMDYVRPLRVFSFPHVNNTLEYIRYNKANSDVGAFLTAMKF GNVKLSDFTPKSA Subject 220 EISSSFKFSSFAMDYVRPLRVFSFPHVNNTLEYIRYNKANSDVGAFLTAMKFAGNVKLSDFTPKSA 417
Range 2: 17 to 118 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
91.8 bits(194) | 0.0 | 34/34(100%) | 0/34(0%) | Minus/Plus |
Query 301 YYFNFPLAFLWWFFFSWCV*RECFSIFLRTI*GV 402 YYFNFPLAFLWWFFFSWCV*RECFSIFLRTI*GV Subject 17 YYFNFPLAFLWWFFFSWCV*RECFSIFLRTI*GV 118
Range 3: 99 to 179 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
23.1 bits(44) | 0.0 | 27/27(100%) | 0/27(0%) | Minus/Plus |
Query 240 YVPSREXXXXXXXXXXXXXXFPAV*GK 320 YVPSREFYLSFNFFSFLVFNFPAV*GK Subject 99 YVPSREFYLSFNFFSFLVFNFPAV*GK 179
Range 4: 220 to 417 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
158.2 bits(339) | 0.0 | 65/66(98%) | 0/66(0%) | Plus/Minus |
Query 2 GTLGCEVR*LHIPCELHGCQESSYIAISLVVPNVLQGIIDMRKGENAQRTNIIHGET*KLERRGNF 199 GTLGCEVR*LHIPCELHGCQESSYIAISLVVPNVLQGIIDMRKGENAQRTN+IHGET*KLERRGNF Subject 220 GTLGCEVR*LHIPCELHGCQESSYIAISLVVPNVLQGIIDMRKGENAQRTNVIHGET*KLERRGNF 417
Range 5: 37 to 138 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
80.8 bits(170) | 0.0 | 34/34(100%) | 0/34(0%) | Plus/Minus |
Query 281 RS*NLDKTP*MVRRKIEKHSR*THQEKKNHHKNA 382 RS*NLDKTP*MVRRKIEKHSR*THQEKKNHHKNA Subject 37 RS*NLDKTP*MVRRKIEKHSR*THQEKKNHHKNA 138
Range 6: 219 to 416 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
145.4 bits(311) | 0.0 | 65/66(98%) | 0/66(0%) | Plus/Minus |
Query 3 ALLGVKSDNFTFPVNFMAVRKAPTSLLALLYLMYSKVLLT*GKEKTRNGRT*SMAKLENLKEEEIS 200 ALLGVKSDNFTFP NFMAVRKAPTSLLALLYLMYSKVLLT*GKEKTRNGRT*SMAKLENLKEEEIS Subject 219 ALLGVKSDNFTFPANFMAVRKAPTSLLALLYLMYSKVLLT*GKEKTRNGRT*SMAKLENLKEEEIS 416
Range 7: 32 to 118 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
68.9 bits(144) | 0.0 | 29/29(100%) | 0/29(0%) | Plus/Minus |
Query 301 NSLDGT*ENRKTLTLNTPREEKPPQKR*R 387 NSLDGT*ENRKTLTLNTPREEKPPQKR*R Subject 32 NSLDGT*ENRKTLTLNTPREEKPPQKR*R 118
Range 8: 254 to 418 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
135.3 bits(289) | 0.0 | 53/55(96%) | 0/55(0%) | Plus/Minus |
Query 1 RHSWV*SQITSHSL*TSWLSGKLLHRY*PCCT*CTPRYY*HEERRKRATDEHNPW 165 RHSWV*SQITSHSL TSWLSGKLLHRY*PCCT*CTPRYY*HEERRKRATDE NPW Subject 254 RHSWV*SQITSHSLRTSWLSGKLLHRY*PCCT*CTPRYY*HEERRKRATDERNPW 418
Range 9: 96 to 137 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
36.3 bits(73) | 0.0 | 14/14(100%) | 0/14(0%) | Plus/Minus |
Query 282 EVKT*IKLPRWYVG 323 EVKT*IKLPRWYVG Subject 96 EVKT*IKLPRWYVG 137
Range 10: 245 to 418 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.6 bits(283) | 0.0 | 57/58(98%) | 0/58(0%) | Minus/Plus |
Query 1 QVSPWIMFVRCAFSPFLMSIIPWSTLGTTRLIAM*ELS*QP*SSQGM*SYLTSHPRVP 174 QVSPWI FVRCAFSPFLMSIIPWSTLGTTRLIAM*ELS*QP*SSQGM*SYLTSHPRVP Subject 245 QVSPWITFVRCAFSPFLMSIIPWSTLGTTRLIAM*ELS*QP*SSQGM*SYLTSHPRVP 418
Range 11: 97 to 129 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
28.6 bits(56) | 0.0 | 11/11(100%) | 0/11(0%) | Minus/Plus |
Query 290 PTYHLGSFI*V 322 PTYHLGSFI*V Subject 97 PTYHLGSFI*V 129
Range 12: 15 to 47 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
28.1 bits(55) | 0.0 | 11/11(100%) | 0/11(0%) | Minus/Plus |
Query 372 FTILTFL*RFC 404 FTILTFL*RFC Subject 15 FTILTFL*RFC 47
Range 13: 246 to 416 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.0 bits(273) | 0.0 | 55/57(96%) | 0/57(0%) | Minus/Plus |
Query 3 KFRHGLCSSVARFLLSSCQ*YLGVH*VQQG**RCRSFPDSHEVHRECEVI*LHTQEC 173 KFRHGL SSVARFLLSSCQ*YLGVH*VQQG**RCRSFPDSHEV RECEVI*LHTQEC Subject 246 KFRHGLRSSVARFLLSSCQ*YLGVH*VQQG**RCRSFPDSHEVRRECEVI*LHTQEC 416
Nucleotide Sequence (732 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
571.2 | 3156.3 | 28% | 5.31e-161 | 100% | JX559645.1 | |
571.2 | 3133.3 | 28% | 5.31e-161 | 99% | GQ352631.1 | |
571.2 | 3137.5 | 28% | 5.31e-161 | 96% | GU983863.1 | |
571.2 | 3148.5 | 28% | 5.31e-161 | 99% | KX756669.1 | |
567.1 | 2791.2 | 26% | 9.251e-160 | 82% | GQ352632.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 12
Range 1: 11412 to 12140 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
571.2 bits(1243) | 0.0 | 243/243(100%) | 0/243(0%) | Minus/Plus |
Query 2 AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR 730 AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR Subject 11412 AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR 12140
Range 2: 11410 to 12141 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
556.4 bits(1208) | 0.0 | 244/244(100%) | 0/244(0%) | Plus/Minus |
Query 1 LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSXXXXXXXXNI*NRYCRTRP*ISAAN*PHHS*P*LEHLTPQS*QQ*PGLGKSCQDQF*ILPQP*R*MVQRLRPVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH 732 LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSKP*PHKPPNI*NRYCRTRP*ISAAN*PHHS*P*LEHLTPQS*QQ*PGLGKSCQDQF*ILPQP*R*MVQRLRPVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH Subject 11410 LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSKP*PHKPPNI*NRYCRTRP*ISAAN*PHHS*P*LEHLTPQS*QQ*PGLGKSCQDQF*ILPQP*R*MVQRLRPVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH 12141
Range 3: 11652 to 12140 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
393.8 bits(853) | 0.0 | 163/163(100%) | 0/163(0%) | Plus/Minus |
Query 2 SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHITPDL 490 SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHITPDL Subject 11652 SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHITPDL 12140
Range 4: 11412 to 11612 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
171.5 bits(368) | 0.0 | 67/67(100%) | 0/67(0%) | Plus/Minus |
Query 530 RVWVKVVKTSFEYFHSPSAEWCNDCVQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG 730 RVWVKVVKTSFEYFHSPSAEWCNDCVQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG Subject 11412 RVWVKVVKTSFEYFHSPSAEWCNDCVQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG 11612
Range 5: 11656 to 12141 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
378.6 bits(820) | 0.0 | 162/162(100%) | 0/162(0%) | Minus/Plus |
Query 1 SGVMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTLXXXXXXXR*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE 486 SGVMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTL*RIR*RTR*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE Subject 11656 SGVMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTL*RIR*RTR*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE 12141
Range 6: 11410 to 11583 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
141.3 bits(302) | 0.0 | 58/58(100%) | 0/58(0%) | Minus/Plus |
Query 559 MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNWTQSLHHSALGLWKYSK 732 MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNWTQSLHHSALGLWKYSK Subject 11410 MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNWTQSLHHSALGLWKYSK 11583
Range 7: 11771 to 12139 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
290.7 bits(628) | 0.0 | 123/123(100%) | 0/123(0%) | Minus/Plus |
Query 3 *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE 371 *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE Subject 11771 *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE 12139
Range 8: 11540 to 11710 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
143.1 bits(306) | 0.0 | 57/57(100%) | 0/57(0%) | Minus/Plus |
Query 432 NRCTIQR*GCGSIQNWS*QLLPRPGYCCYDWGVKCSS*GQE*CG*FAADI*GRVRQY 602 NRCTIQR*GCGSIQNWS*QLLPRPGYCCYDWGVKCSS*GQE*CG*FAADI*GRVRQY Subject 11540 NRCTIQR*GCGSIQNWS*QLLPRPGYCCYDWGVKCSS*GQE*CG*FAADI*GRVRQY 11710
Range 9: 11411 to 11488 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
62.9 bits(131) | 0.0 | 26/26(100%) | 0/26(0%) | Minus/Plus |
Query 654 CQVRDIRILDEGRLV*Q*RYNATPYP 731 CQVRDIRILDEGRLV*Q*RYNATPYP Subject 11411 CQVRDIRILDEGRLV*Q*RYNATPYP 11488
Range 10: 11843 to 12139 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
235.2 bits(507) | 0.0 | 99/99(100%) | 0/99(0%) | Plus/Minus |
Query 3 LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI 299 LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI Subject 11843 LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI 12139
Range 11: 11537 to 11776 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
147.7 bits(316) | 0.0 | 80/80(100%) | 0/80(0%) | Plus/Minus |
Query 366 PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKXXXXXXXXXXXXDPPVITAITGSG*KLSRPVLNTSTALALNGATIA 605 PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA Subject 11537 PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA 11776
Grapevine leafroll associated virus 3 isolate 621, complete genome
Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 12
Range 1: 11412 to 12140 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
571.2 bits(1243) | 0.0 | 243/243(100%) | 0/243(0%) | Minus/Plus |
Query 2 AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR 730 AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR Subject 11412 AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR 12140
Range 2: 11410 to 12141 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
549.5 bits(1193) | 0.0 | 242/244(99%) | 0/244(0%) | Plus/Minus |
Query 1 LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSXXXXXXXXNI*NRYCRTRP*ISAAN*PHHS*P*LEHLTPQS*QQ*PGLGKSCQDQF*ILPQP*R*MVQRLRPVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH 732 LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRI HLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKY SKP*PHKPPNI*NRYCRTRP*ISAAN*PHHS*P*LEHLTPQS*QQ*PGLGKSCQDQF*ILPQP*R*MVQRLRPVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH Subject 11410 LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRILHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYHSKP*PHKPPNI*NRYCRTRP*ISAAN*PHHS*P*LEHLTPQS*QQ*PGLGKSCQDQF*ILPQP*R*MVQRLRPVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH 12141
Range 3: 11652 to 12140 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
389.2 bits(843) | 0.0 | 161/163(99%) | 0/163(0%) | Plus/Minus |
Query 2 SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHITPDL 490 SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVY+ISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNI VNLSPTSHRTSKIGTVEHDLRYLRQISHITPDL Subject 11652 SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYYISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNITVNLSPTSHRTSKIGTVEHDLRYLRQISHITPDL 12140
Range 4: 11412 to 11612 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
171.5 bits(368) | 0.0 | 67/67(100%) | 0/67(0%) | Plus/Minus |
Query 530 RVWVKVVKTSFEYFHSPSAEWCNDCVQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG 730 RVWVKVVKTSFEYFHSPSAEWCNDCVQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG Subject 11412 RVWVKVVKTSFEYFHSPSAEWCNDCVQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG 11612
Range 5: 11656 to 12141 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
369.9 bits(801) | 0.0 | 160/162(99%) | 0/162(0%) | Minus/Plus |
Query 1 SGVMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTLXXXXXXXR*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE 486 SGVMWLICRRYLRSCSTVPILDVRWLVGLRFT IFWQVIAD*DWWTL*RIR*RTR*WIFSRW*FSRKVVQYPVHILIDTQWVVEM YTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE Subject 11656 SGVMWLICRRYLRSCSTVPILDVRWLVGLRFTVIFWQVIAD*DWWTL*RIR*RTR*WIFSRW*FSRKVVQYPVHILIDTQWVVEM*YTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE 12141
Range 6: 11410 to 11583 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
141.3 bits(302) | 0.0 | 58/58(100%) | 0/58(0%) | Minus/Plus |
Query 559 MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNWTQSLHHSALGLWKYSK 732 MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNWTQSLHHSALGLWKYSK Subject 11410 MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNWTQSLHHSALGLWKYSK 11583
Range 7: 11771 to 12139 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
287.9 bits(622) | 0.0 | 122/123(99%) | 0/123(0%) | Minus/Plus |
Query 3 *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE 371 *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRC IRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE Subject 11771 *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCSIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE 12139
Range 8: 11540 to 11710 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
143.1 bits(306) | 0.0 | 57/57(100%) | 0/57(0%) | Minus/Plus |
Query 432 NRCTIQR*GCGSIQNWS*QLLPRPGYCCYDWGVKCSS*GQE*CG*FAADI*GRVRQY 602 NRCTIQR*GCGSIQNWS*QLLPRPGYCCYDWGVKCSS*GQE*CG*FAADI*GRVRQY Subject 11540 NRCTIQR*GCGSIQNWS*QLLPRPGYCCYDWGVKCSS*GQE*CG*FAADI*GRVRQY 11710
Range 9: 11411 to 11488 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
62.9 bits(131) | 0.0 | 26/26(100%) | 0/26(0%) | Minus/Plus |
Query 654 CQVRDIRILDEGRLV*Q*RYNATPYP 731 CQVRDIRILDEGRLV*Q*RYNATPYP Subject 11411 CQVRDIRILDEGRLV*Q*RYNATPYP 11488
Range 10: 11843 to 12139 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
235.2 bits(507) | 0.0 | 99/99(100%) | 0/99(0%) | Plus/Minus |
Query 3 LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI 299 LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI Subject 11843 LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI 12139
Range 11: 11537 to 11776 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
147.7 bits(316) | 0.0 | 80/80(100%) | 0/80(0%) | Plus/Minus |
Query 366 PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKXXXXXXXXXXXXDPPVITAITGSG*KLSRPVLNTSTALALNGATIA 605 PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA Subject 11537 PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA 11776
Grapevine leafroll associated virus 3 isolate WA MR, complete genome
Sequence ID: GU983863.1 Length: 18498 Number of Matches: 12
Range 1: 11412 to 12140 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
571.2 bits(1243) | 0.0 | 243/243(100%) | 0/243(0%) | Minus/Plus |
Query 2 AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR 730 AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR Subject 11412 AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR 12140
Range 2: 11410 to 12141 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
551.4 bits(1197) | 0.0 | 242/244(99%) | 0/244(0%) | Plus/Minus |
Query 1 LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSXXXXXXXXNI*NRYCRTRP*ISAAN*PHHS*P*LEHLTPQS*QQ*PGLGKSCQDQF*ILPQP*R*MVQRLRPVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH 732 LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSKP*PHKPPNI*NRYCRTRP*ISAAN*PHHS*P*LEHLTPQS*QQ*PGLGKSC+DQF*ILP P*R*MVQRLRPVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH Subject 11410 LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSKP*PHKPPNI*NRYCRTRP*ISAAN*PHHS*P*LEHLTPQS*QQ*PGLGKSCRDQF*ILPLP*R*MVQRLRPVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH 12141
Range 3: 11652 to 12140 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
393.8 bits(853) | 0.0 | 163/163(100%) | 0/163(0%) | Plus/Minus |
Query 2 SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHITPDL 490 SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHITPDL Subject 11652 SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHITPDL 12140
Range 4: 11412 to 11612 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
167.4 bits(359) | 0.0 | 65/67(97%) | 0/67(0%) | Plus/Minus |
Query 530 RVWVKVVKTSFEYFHSPSAEWCNDCVQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG 730 RVWVKVV+TSFEYFH PSAEWCNDCVQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG Subject 11412 RVWVKVVETSFEYFHCPSAEWCNDCVQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG 11612
Range 5: 11656 to 12141 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
378.6 bits(820) | 0.0 | 162/162(100%) | 0/162(0%) | Minus/Plus |
Query 1 SGVMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTLXXXXXXXR*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE 486 SGVMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTL*RIR*RTR*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE Subject 11656 SGVMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTL*RIR*RTR*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE 12141
Range 6: 11410 to 11583 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
138.5 bits(296) | 0.0 | 57/58(98%) | 0/58(0%) | Minus/Plus |
Query 559 MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNWTQSLHHSALGLWKYSK 732 MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNWTQSLHHSALG WKYSK Subject 11410 MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNWTQSLHHSALGQWKYSK 11583
Range 7: 11771 to 12139 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
290.7 bits(628) | 0.0 | 123/123(100%) | 0/123(0%) | Minus/Plus |
Query 3 *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE 371 *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE Subject 11771 *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE 12139
Range 8: 11540 to 11710 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
136.2 bits(291) | 0.0 | 55/57(96%) | 0/57(0%) | Minus/Plus |
Query 432 NRCTIQR*GCGSIQNWS*QLLPRPGYCCYDWGVKCSS*GQE*CG*FAADI*GRVRQY 602 NRCTIQR*G GSIQNWS QLLPRPGYCCYDWGVKCSS*GQE*CG*FAADI*GRVRQY Subject 11540 NRCTIQR*GSGSIQNWSRQLLPRPGYCCYDWGVKCSS*GQE*CG*FAADI*GRVRQY 11710
Range 9: 11411 to 11488 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
62.9 bits(131) | 0.0 | 26/26(100%) | 0/26(0%) | Minus/Plus |
Query 654 CQVRDIRILDEGRLV*Q*RYNATPYP 731 CQVRDIRILDEGRLV*Q*RYNATPYP Subject 11411 CQVRDIRILDEGRLV*Q*RYNATPYP 11488
Range 10: 11843 to 12139 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
235.2 bits(507) | 0.0 | 99/99(100%) | 0/99(0%) | Plus/Minus |
Query 3 LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI 299 LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI Subject 11843 LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI 12139
Range 11: 11537 to 11776 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
147.7 bits(316) | 0.0 | 80/80(100%) | 0/80(0%) | Plus/Minus |
Query 366 PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKXXXXXXXXXXXXDPPVITAITGSG*KLSRPVLNTSTALALNGATIA 605 PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA Subject 11537 PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA 11776
Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome
Sequence ID: KX756669.1 Length: 18313 Number of Matches: 12
Range 1: 11227 to 11955 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
571.2 bits(1243) | 0.0 | 243/243(100%) | 0/243(0%) | Minus/Plus |
Query 2 AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR 730 AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR Subject 11227 AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR 11955
Range 2: 11225 to 11956 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
553.7 bits(1202) | 0.0 | 243/244(100%) | 0/244(0%) | Plus/Minus |
Query 1 LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSXXXXXXXXNI*NRYCRTRP*ISAAN*PHHS*P*LEHLTPQS*QQ*PGLGKSCQDQF*ILPQP*R*MVQRLRPVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH 732 LSQIYRPMNPVRLLSRVPDIH LLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSKP*PHKPPNI*NRYCRTRP*ISAAN*PHHS*P*LEHLTPQS*QQ*PGLGKSCQDQF*ILPQP*R*MVQRLRPVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH Subject 11225 LSQIYRPMNPVRLLSRVPDIHFLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSKP*PHKPPNI*NRYCRTRP*ISAAN*PHHS*P*LEHLTPQS*QQ*PGLGKSCQDQF*ILPQP*R*MVQRLRPVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH 11956
Range 3: 11467 to 11955 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
391.9 bits(849) | 0.0 | 162/163(99%) | 0/163(0%) | Plus/Minus |
Query 2 SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHITPDL 490 SPRFIDQ*IQYVCCPGYQIFI YFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHITPDL Subject 11467 SPRFIDQ*IQYVCCPGYQIFIFYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHITPDL 11955
Range 4: 11227 to 11427 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
171.5 bits(368) | 0.0 | 67/67(100%) | 0/67(0%) | Plus/Minus |
Query 530 RVWVKVVKTSFEYFHSPSAEWCNDCVQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG 730 RVWVKVVKTSFEYFHSPSAEWCNDCVQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG Subject 11227 RVWVKVVKTSFEYFHSPSAEWCNDCVQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG 11427
Range 5: 11471 to 11956 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
377.3 bits(817) | 0.0 | 161/162(99%) | 0/162(0%) | Minus/Plus |
Query 1 SGVMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTLXXXXXXXR*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE 486 SGVMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTL*RIR*RTR*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*+MNIWYPGQQTYWIHWSINLGE Subject 11471 SGVMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTL*RIR*RTR*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*KMNIWYPGQQTYWIHWSINLGE 11956
Range 6: 11225 to 11398 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
141.3 bits(302) | 0.0 | 58/58(100%) | 0/58(0%) | Minus/Plus |
Query 559 MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNWTQSLHHSALGLWKYSK 732 MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNWTQSLHHSALGLWKYSK Subject 11225 MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNWTQSLHHSALGLWKYSK 11398
Range 7: 11586 to 11954 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
288.8 bits(624) | 0.0 | 122/123(99%) | 0/123(0%) | Minus/Plus |
Query 3 *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE 371 *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSK+*ISGTRDNKRTGFIGL*IWE Subject 11586 *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKK*ISGTRDNKRTGFIGL*IWE 11954
Range 8: 11355 to 11525 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
143.1 bits(306) | 0.0 | 57/57(100%) | 0/57(0%) | Minus/Plus |
Query 432 NRCTIQR*GCGSIQNWS*QLLPRPGYCCYDWGVKCSS*GQE*CG*FAADI*GRVRQY 602 NRCTIQR*GCGSIQNWS*QLLPRPGYCCYDWGVKCSS*GQE*CG*FAADI*GRVRQY Subject 11355 NRCTIQR*GCGSIQNWS*QLLPRPGYCCYDWGVKCSS*GQE*CG*FAADI*GRVRQY 11525
Range 9: 11226 to 11303 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
62.9 bits(131) | 0.0 | 26/26(100%) | 0/26(0%) | Minus/Plus |
Query 654 CQVRDIRILDEGRLV*Q*RYNATPYP 731 CQVRDIRILDEGRLV*Q*RYNATPYP Subject 11226 CQVRDIRILDEGRLV*Q*RYNATPYP 11303
Range 10: 11658 to 11954 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
235.2 bits(507) | 0.0 | 99/99(100%) | 0/99(0%) | Plus/Minus |
Query 3 LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI 299 LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI Subject 11658 LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI 11954
Range 11: 11352 to 11591 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
147.7 bits(316) | 0.0 | 80/80(100%) | 0/80(0%) | Plus/Minus |
Query 366 PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKXXXXXXXXXXXXDPPVITAITGSG*KLSRPVLNTSTALALNGATIA 605 PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA Subject 11352 PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA 11591
Grapevine leafroll associated virus 3 isolate 623, complete genome
Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 13
Range 1: 11412 to 12140 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
567.1 bits(1234) | 0.0 | 241/243(99%) | 0/243(0%) | Minus/Plus |
Query 2 AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR 730 AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFD+TDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDP ETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR Subject 11412 AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDNTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPKETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR 12140
Range 2: 11652 to 12140 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
331.9 bits(718) | 0.0 | 136/163(83%) | 0/163(0%) | Plus/Minus |
Query 2 SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHITPDL 490 SP FIDQ I YVCCPGYQIFILYFLT+N+NR+R+V G IKLR+VGL+WVSPTFRYAPERRFI*KS VILPFKYTV+HISTTHCVS+S+*TGYWTTFRENY+RLK+H+LVR*RIR SVHQSQSAITCQNI VNLSPT +RT KI VEH+LRYLRQI HITPDL Subject 11652 SPGFIDQRI*YVCCPGYQIFILYFLTVNNNRYRTVCG*IKLRYVGLFWVSPTFRYAPERRFI*KSPVILPFKYTVHHISTTHCVSVSV*TGYWTTFRENYYRLKVHHLVR*RIRQSVHQSQSAITCQNITVNLSPTGYRTPKISIVEHNLRYLRQIGHITPDL 12140
Range 3: 11412 to 11612 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
155.0 bits(332) | 0.0 | 61/67(91%) | 0/67(0%) | Plus/Minus |
Query 530 RVWVKVVKTSFEYFHSPSAEWCNDCVQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG 730 RVW+KVVKT FE+FHSPSAEW N+CV FVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG Subject 11412 RVWIKVVKTGFEHFHSPSAEWRNNCV*FVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG 11612
Range 4: 11410 to 12141 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
461.6 bits(1001) | 0.0 | 209/244(86%) | 0/244(0%) | Plus/Minus |
Query 1 LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSXXXXXXXXNI*NRYCRTRP*ISAAN*PHHS*P*LEHLTPQS*QQ*PGLGKSCQDQF*ILPQP*R*MVQRLRPVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH 732 LS+IYRP N VRLLSRVPDIHSLLPH *+*Q P+R W +* A RRSLLGLPYVSIRPGTSVHLEK CYSPLQIYR PHLHHPLCI E MNRVLDYLSGKL P E+P PRPLAYS KCPPVSVRYYLPKY SKP*PH+ PN *N+YCRT+P*ISAAN PHHS*P*LEHLTPQS*QQ* GL KSCQD+F* LPQP*R*M Q+LR VRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH Subject 11410 LSRIYRPTNLVRLLSRVPDIHSLLPHR*Q*QIPYRLWIN*IALRRSLLGLPYVSIRPGTSVHLEKPCYSPLQIYRTPHLHHPLCICECMNRVLDYLSGKLLPVESPPPRPLAYSSKCPPVSVRYYLPKYHSKP*PHRLPNT*NQYCRTQP*ISAANWPHHS*P*LEHLTPQS*QQ*QGLDKSCQDRF*TLPQP*R*MAQQLRLVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH 12141
Range 5: 11771 to 12139 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
235.2 bits(507) | 0.0 | 101/123(82%) | 0/123(0%) | Minus/Plus |
Query 3 *RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE 371 *RTETGGHF+EYANGRG G S G NFPER*SNTLFI+S IHSGWWRCG+RYI*RGE*Q FSK*TDVPGRIET*GRP RDRR A+* +H R G+CY * *GSKE*ISGTRDNKRT F+GL*I E Subject 11771 *RTETGGHFDEYANGRGGGLSTGSNFPER*SNTLFIHSQIHSGWWRCGVRYI*RGE*QGFSK*TDVPGRIET*GRPKRDRRSAI*FIHRRYGICYC*R*GSKE*ISGTRDNKRTRFVGL*IRE 12139
Range 6: 11410 to 11583 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.9 bits(264) | 0.0 | 54/58(93%) | 0/58(0%) | Minus/Plus |
Query 559 MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNWTQSLHHSALGLWKYSK 732 MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATN TQ L HSALGLWK SK Subject 11410 MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATN*TQLLRHSALGLWKCSK 11583
Range 7: 11656 to 11796 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
95.9 bits(203) | 0.0 | 39/47(83%) | 0/47(0%) | Minus/Plus |
Query 346 SGVMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*DWWTL 486 SGVMW ICRRYLR CST+ IL VR VGLRFT IFWQVIAD*DWWTL Subject 11656 SGVMWPICRRYLRLCSTILILGVR*PVGLRFTVIFWQVIAD*DWWTL 11796
Range 8: 11843 to 12139 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
229.3 bits(494) | 0.0 | 96/99(97%) | 0/99(0%) | Plus/Minus |
Query 3 LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI 299 LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSV++LNCATSVS GSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI Subject 11843 LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVDKLNCATSVSFGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI 12139
Range 9: 11537 to 11776 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
147.7 bits(316) | 0.0 | 80/80(100%) | 0/80(0%) | Plus/Minus |
Query 366 PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKXXXXXXXXXXXXDPPVITAITGSG*KLSRPVLNTSTALALNGATIA 605 PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA Subject 11537 PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA 11776
Range 10: 11411 to 11488 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
63.8 bits(133) | 0.0 | 26/26(100%) | 0/26(0%) | Plus/Minus |
Query 654 GIRCCVIALLLDKSSFIEDTNIPNLA 731 GIRCCVIALLLDKSSFIEDTNIPNLA Subject 11411 GIRCCVIALLLDKSSFIEDTNIPNLA 11488
Range 11: 11824 to 12141 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
200.4 bits(431) | 0.0 | 87/106(82%) | 0/106(0%) | Minus/Plus |
Query 1 WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE 318 W F+R *FSRKVVQYPVH L DTQWVVEMW TVYLKGRIT LF*MNRRSGAYRNVGETQ RPT R+LI P+T R LL L VRK*RMNIWYPGQQTY I WSIN GE Subject 11824 WTFNR**FSRKVVQYPVHTLTDTQWVVEMWCTVYLKGRITGLF*MNRRSGAYRNVGETQKRPT*RNLIYPQTVRYLLLLTVRK*RMNIWYPGQQTY*IRWSINPGE 12141
Range 12: 11540 to 11710 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
116.5 bits(248) | 0.0 | 49/57(86%) | 0/57(0%) | Minus/Plus |
Query 432 NRCTIQR*GCGSIQNWS*QLLPRPGYCCYDWGVKCSS*GQE*CG*FAADI*GRVRQY 602 N C IQR*GCGS+QN S*QLL RP YCCYDWGVKCSS*GQE*CG FAADI*G VRQY Subject 11540 NCCAIQR*GCGSVQNRS*QLLSRPCYCCYDWGVKCSS*GQE*CGQFAADI*GCVRQY 11710
Nucleotide Sequence (954 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
708.1 | 4012.2 | 27% | 0 | 96% | GQ352632.1 | |
704.4 | 4002.6 | 27% | 0 | 96% | HQ130283.1 | |
708.1 | 4012.2 | 27% | 0 | 96% | HQ130284.1 | |
708.1 | 4012.2 | 27% | 0 | 96% | HQ130287.1 | |
708.1 | 4012.2 | 27% | 0 | 96% | HQ130288.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 623, complete genome
Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 13
Range 1: 14085 to 14771 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
564.7 bits(1226) | 0.0 | 228/229(100%) | 0/229(0%) | Minus/Minus |
Query 267 LEDVV*GVIGRHRLISKRLLPS*IPC*YCVVIEQIVRRTNAVNRVRKEFRWYSMLCHDLFIHHQFTIQGRRDQGWREVC*ILPYRVFVTR*SGSLFNAIVYPHRIYLLSIVRFYVVELFELRRRRCKERASDLHHVQEEFCLGCCVIGAHNLLTQLYQCGINLHCYLY*YFSRLVNNFRFMGNPR*VQSYPLTHSL*ELVWIFLKNQLIWCKSLRFRHHPYIGFWWFHH 953 LEDVV*GVIGRHRLISKRLL S*IPC*YCVVIEQIVRRTNAVNRVRKEFRWYSMLCHDLFIHHQFTIQGRRDQGWREVC*ILPYRVFVTR*SGSLFNAIVYPHRIYLLSIVRFYVVELFELRRRRCKERASDLHHVQEEFCLGCCVIGAHNLLTQLYQCGINLHCYLY*YFSRLVNNFRFMGNPR*VQSYPLTHSL*ELVWIFLKNQLIWCKSLRFRHHPYIGFWWFHH Subject 14085 LEDVV*GVIGRHRLISKRLLSS*IPC*YCVVIEQIVRRTNAVNRVRKEFRWYSMLCHDLFIHHQFTIQGRRDQGWREVC*ILPYRVFVTR*SGSLFNAIVYPHRIYLLSIVRFYVVELFELRRRRCKERASDLHHVQEEFCLGCCVIGAHNLLTQLYQCGINLHCYLY*YFSRLVNNFRFMGNPR*VQSYPLTHSL*ELVWIFLKNQLIWCKSLRFRHHPYIGFWWFHH 14771
Range 2: 13819 to 14031 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
166.5 bits(357) | 0.0 | 70/71(99%) | 0/71(0%) | Minus/Minus |
Query 1 WRIRTFPALQRFLLTPPASRP*RILRNSPY*TFLVPHPLL*LSDCFRGQLHISALISVQTPSRPLNKNRTQ 213 WRIRTFPALQRFLLTPPASRP*RILRNSPY*TFLVPHPLL*LSDCFRGQLHISALISVQTPSRPLNKN TQ Subject 13819 WRIRTFPALQRFLLTPPASRP*RILRNSPY*TFLVPHPLL*LSDCFRGQLHISALISVQTPSRPLNKNHTQ 14031
Range 3: 13821 to 14771 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
708.1 bits(1539) | 0.0 | 317/317(100%) | 0/317(0%) | Plus/Plus |
Query 3 ECGFC*VDAMAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFXXXXXXXXXQEPPKQPTTQVVEPPEADIGVVPESETLTPNKLVFEKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDDTTTKTKFFLYVMQIACXXXXXXXXXXKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQ 953 ECGFC*VDAMAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFATAALATAAQEPPKQPTTQVVEPPEADIGVVPESETLTPNKLVFEKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDDTTTKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQ Subject 13821 ECGFC*VDAMAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFATAALATAAQEPPKQPTTQVVEPPEADIGVVPESETLTPNKLVFEKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDDTTTKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQ 14771
Range 4: 13820 to 14404 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
437.3 bits(948) | 0.0 | 195/195(100%) | 0/195(0%) | Minus/Minus |
Query 2 EDDVKNVQAICITYKKNFVLVVVSSEPITFLHSSTNAVLIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLSGSFSKTSLFGVRVSDSGTTPISASGGSTTCVVGCLGGSCXXXXXXXXANTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLRLFSGTTSYICPNFSSNAIASTQQKPHS 586 EDDVKNVQAICITYKKNFVLVVVSSEPITFLHSSTNAVLIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLSGSFSKTSLFGVRVSDSGTTPISASGGSTTCVVGCLGGSCAAVAKAAVANTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLRLFSGTTSYICPNFSSNAIASTQQKPHS Subject 13820 EDDVKNVQAICITYKKNFVLVVVSSEPITFLHSSTNAVLIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLSGSFSKTSLFGVRVSDSGTTPISASGGSTTCVVGCLGGSCAAVAKAAVANTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLRLFSGTTSYICPNFSSNAIASTQQKPHS 14404
Range 5: 14444 to 14770 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
265.5 bits(573) | 0.0 | 109/109(100%) | 0/109(0%) | Minus/Minus |
Query 626 WKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIAYGKNFGGTPCCAMTFSFITSLPFRVAVIKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP 952 WKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIAYGKNFGGTPCCAMTFSFITSLPFRVAVIKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP Subject 14444 WKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIAYGKNFGGTPCCAMTFSFITSLPFRVAVIKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP 14770
Range 6: 13820 to 14629 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
574.3 bits(1247) | 0.0 | 269/270(100%) | 0/270(0%) | Plus/Plus |
Query 2 *VRFLLSGRDGV*TEIRADI*SCPRKQSES*SRGCGTRKV**GEFLKIR*GRDAGGVNRNRCSAGKVRIRHSSFSYSGTGAT*AADNXXXXXXXXXXXXXXXI*DSYTK*AGF*ERSRQVLKDYG*GDSFGLNGGYP*TESY*RAGKSISRGSNED*YRIGRAV*EGYGLR*HNNQDKILLVRDADRLHVLYIVFDGVQRVRLHRNGRWKEDICGVGIRLH*TSCRFNGLRKPGKAVSSILHANLDHGDPEW*TGDE*KGHGTAWSTTEI 811 *V FLLSGRDGV*TEIRADI*SCPRKQSES*SRGCGTRKV**GEFLKIR*GRDAGGVNRNRCSAGKVRIRHSSFSYSGTGAT*AADNASGGTTRSRYRGGAGI*DSYTK*AGF*ERSRQVLKDYG*GDSFGLNGGYP*TESY*RAGKSISRGSNED*YRIGRAV*EGYGLR*HNNQDKILLVRDADRLHVLYIVFDGVQRVRLHRNGRWKEDICGVGIRLH*TSCRFNGLRKPGKAVSSILHANLDHGDPEW*TGDE*KGHGTAWSTTEI Subject 13820 *VWFLLSGRDGV*TEIRADI*SCPRKQSES*SRGCGTRKV**GEFLKIR*GRDAGGVNRNRCSAGKVRIRHSSFSYSGTGAT*AADNASGGTTRSRYRGGAGI*DSYTK*AGF*ERSRQVLKDYG*GDSFGLNGGYP*TESY*RAGKSISRGSNED*YRIGRAV*EGYGLR*HNNQDKILLVRDADRLHVLYIVFDGVQRVRLHRNGRWKEDICGVGIRLH*TSCRFNGLRKPGKAVSSILHANLDHGDPEW*TGDE*KGHGTAWSTTEI 14629
Range 7: 14687 to 14770 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
60.2 bits(125) | 0.0 | 27/28(96%) | 0/28(0%) | Plus/Plus |
Query 869 NTSMEFS*AAGV*K*DGDGR*HLTQRLP 952 NTSMEFS* AGV*K*DGDGR*HLTQRLP Subject 14687 NTSMEFS*TAGV*K*DGDGR*HLTQRLP 14770
Range 8: 14443 to 14772 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
250.8 bits(541) | 0.0 | 109/110(99%) | 0/110(0%) | Plus/Plus |
Query 625 MERRYMRCGYTIALNKLPLQRVTKTR*GSI*HTSRQP*SRRP*MVNW**MKRSWHSMEYHRNSFRTRLTAFVRRTICSITTQY*HGI*LGSRRLEIRR*RPITPYTTSSN 954 MERRYMRCGYTIALNKLPLQRVTKTR*GSI*HTSRQP*SRRP*MVNW**MKRSWHSMEYHRNSFRTRLTAFVRRTICSITTQY*HGI*L SRRLEIRR*RPITPYTTSSN Subject 14443 MERRYMRCGYTIALNKLPLQRVTKTR*GSI*HTSRQP*SRRP*MVNW**MKRSWHSMEYHRNSFRTRLTAFVRRTICSITTQY*HGI*LDSRRLEIRR*RPITPYTTSSN 14772
Range 9: 14083 to 14373 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
239.3 bits(516) | 0.0 | 97/97(100%) | 0/97(0%) | Plus/Plus |
Query 265 KWWNHQKPI*GWCRNLRLLHQISWFLRKIQTSS*RLWVRG*LWT*RGLPINRKLLTSREKYQ*R*Q*RLIPHW*SCVRRLWAPMTQQPRQNSSCT*C 555 KWWNHQKPI*GWCRNLRLLHQISWFLRKIQTSS*RLWVRG*LWT*RGLPINRKLLTSREKYQ*R*Q*RLIPHW*SCVRRLWAPMTQQPRQNSSCT*C Subject 14083 KWWNHQKPI*GWCRNLRLLHQISWFLRKIQTSS*RLWVRG*LWT*RGLPINRKLLTSREKYQ*R*Q*RLIPHW*SCVRRLWAPMTQQPRQNSSCT*C 14373
Range 10: 13819 to 14031 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
156.9 bits(336) | 0.0 | 70/71(99%) | 0/71(0%) | Plus/Plus |
Query 1 LSAVFVEWTRWRLN*N*GRYMKLSPKTI*ELE*GMRHKESLVRRVS*NTLRTGRRRS*QESL*CRKSTYSP 213 LS VFVEWTRWRLN*N*GRYMKLSPKTI*ELE*GMRHKESLVRRVS*NTLRTGRRRS*QESL*CRKSTYSP Subject 13819 LSVVFVEWTRWRLN*N*GRYMKLSPKTI*ELE*GMRHKESLVRRVS*NTLRTGRRRS*QESL*CRKSTYSP 14031
Range 11: 14281 to 14772 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
378.6 bits(820) | 0.0 | 163/164(99%) | 0/164(0%) | Minus/Minus |
Query 463 VGRRCVRCYRPSPSYF*TPAA*LNSMLVLRRY*TDRTSDERSQSRTERISVVLHAVP*PFHSSPVYHSGSP*SRLA*SMLDTALPGFRNPLKRQLV*CNRIPTPHISSFHRPFLCSRTL*TPSKTM*RTCKRSASRTRRILSWLLCHRSP*PSYTALPMRY*SS 954 VGRRCVRCYRPSPSYF*TPA *LNSMLVLRRY*TDRTSDERSQSRTERISVVLHAVP*PFHSSPVYHSGSP*SRLA*SMLDTALPGFRNPLKRQLV*CNRIPTPHISSFHRPFLCSRTL*TPSKTM*RTCKRSASRTRRILSWLLCHRSP*PSYTALPMRY*SS Subject 14281 VGRRCVRCYRPSPSYF*TPAV*LNSMLVLRRY*TDRTSDERSQSRTERISVVLHAVP*PFHSSPVYHSGSP*SRLA*SMLDTALPGFRNPLKRQLV*CNRIPTPHISSFHRPFLCSRTL*TPSKTM*RTCKRSASRTRRILSWLLCHRSP*PSYTALPMRY*SS 14772
Range 12: 13821 to 14030 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
165.1 bits(354) | 0.0 | 69/70(99%) | 0/70(0%) | Minus/Minus |
Query 3 GEYVLFRHYSDSC*LRLRPVLNVF*ETRLTKLSLCRIPYSNSQIVFGDNFIYLP*FQFKRHRVHSTKTAL 212 GEYVLFRHYSDSC*LRLRPVLNVF*ETRLTKLSLCRIPYSNSQIVFGDNFIYLP*FQFKRHRVHSTKT L Subject 13821 GEYVLFRHYSDSC*LRLRPVLNVF*ETRLTKLSLCRIPYSNSQIVFGDNFIYLP*FQFKRHRVHSTKTTL 14030
Grapevine leafroll associated virus 3 isolate 3 3 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130283.1 Length: 4711 Number of Matches: 13
Range 1: 354 to 1040 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
564.7 bits(1226) | 0.0 | 228/229(100%) | 0/229(0%) | Minus/Minus |
Query 267 LEDVV*GVIGRHRLISKRLLPS*IPC*YCVVIEQIVRRTNAVNRVRKEFRWYSMLCHDLFIHHQFTIQGRRDQGWREVC*ILPYRVFVTR*SGSLFNAIVYPHRIYLLSIVRFYVVELFELRRRRCKERASDLHHVQEEFCLGCCVIGAHNLLTQLYQCGINLHCYLY*YFSRLVNNFRFMGNPR*VQSYPLTHSL*ELVWIFLKNQLIWCKSLRFRHHPYIGFWWFHH 953 LEDVV*GVIGRHRLISKRLL S*IPC*YCVVIEQIVRRTNAVNRVRKEFRWYSMLCHDLFIHHQFTIQGRRDQGWREVC*ILPYRVFVTR*SGSLFNAIVYPHRIYLLSIVRFYVVELFELRRRRCKERASDLHHVQEEFCLGCCVIGAHNLLTQLYQCGINLHCYLY*YFSRLVNNFRFMGNPR*VQSYPLTHSL*ELVWIFLKNQLIWCKSLRFRHHPYIGFWWFHH Subject 354 LEDVV*GVIGRHRLISKRLLSS*IPC*YCVVIEQIVRRTNAVNRVRKEFRWYSMLCHDLFIHHQFTIQGRRDQGWREVC*ILPYRVFVTR*SGSLFNAIVYPHRIYLLSIVRFYVVELFELRRRRCKERASDLHHVQEEFCLGCCVIGAHNLLTQLYQCGINLHCYLY*YFSRLVNNFRFMGNPR*VQSYPLTHSL*ELVWIFLKNQLIWCKSLRFRHHPYIGFWWFHH 1040
Range 2: 88 to 300 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
166.5 bits(357) | 0.0 | 70/71(99%) | 0/71(0%) | Minus/Minus |
Query 1 WRIRTFPALQRFLLTPPASRP*RILRNSPY*TFLVPHPLL*LSDCFRGQLHISALISVQTPSRPLNKNRTQ 213 WRIRTFPALQRFLLTPPASRP*RILRNSPY*TFLVPHPLL*LSDCFRGQLHISALISVQTPSRPLNKN TQ Subject 88 WRIRTFPALQRFLLTPPASRP*RILRNSPY*TFLVPHPLL*LSDCFRGQLHISALISVQTPSRPLNKNHTQ 300
Range 3: 90 to 1040 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
704.4 bits(1531) | 0.0 | 316/317(100%) | 0/317(0%) | Plus/Plus |
Query 3 ECGFC*VDAMAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFXXXXXXXXXQEPPKQPTTQVVEPPEADIGVVPESETLTPNKLVFEKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDDTTTKTKFFLYVMQIACXXXXXXXXXXKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQ 953 ECGFC*VDAMAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFATAALATAAQEP KQPTTQVVEPPEADIGVVPESETLTPNKLVFEKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDDTTTKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQ Subject 90 ECGFC*VDAMAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFATAALATAAQEPSKQPTTQVVEPPEADIGVVPESETLTPNKLVFEKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDDTTTKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQ 1040
Range 4: 89 to 673 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
434.1 bits(941) | 0.0 | 194/195(99%) | 0/195(0%) | Minus/Minus |
Query 2 EDDVKNVQAICITYKKNFVLVVVSSEPITFLHSSTNAVLIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLSGSFSKTSLFGVRVSDSGTTPISASGGSTTCVVGCLGGSCXXXXXXXXANTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLRLFSGTTSYICPNFSSNAIASTQQKPHS 586 EDDVKNVQAICITYKKNFVLVVVSSEPITFLHSSTNAVLIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLSGSFSKTSLFGVRVSDSGTTPISASGGSTTCVVGCL GSCAAVAKAAVANTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLRLFSGTTSYICPNFSSNAIASTQQKPHS Subject 89 EDDVKNVQAICITYKKNFVLVVVSSEPITFLHSSTNAVLIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLSGSFSKTSLFGVRVSDSGTTPISASGGSTTCVVGCLDGSCAAVAKAAVANTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLRLFSGTTSYICPNFSSNAIASTQQKPHS 673
Range 5: 713 to 1039 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
265.5 bits(573) | 0.0 | 109/109(100%) | 0/109(0%) | Minus/Minus |
Query 626 WKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIAYGKNFGGTPCCAMTFSFITSLPFRVAVIKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP 952 WKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIAYGKNFGGTPCCAMTFSFITSLPFRVAVIKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP Subject 713 WKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIAYGKNFGGTPCCAMTFSFITSLPFRVAVIKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP 1039
Range 6: 89 to 898 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
571.5 bits(1241) | 0.0 | 268/270(99%) | 0/270(0%) | Plus/Plus |
Query 2 *VRFLLSGRDGV*TEIRADI*SCPRKQSES*SRGCGTRKV**GEFLKIR*GRDAGGVNRNRCSAGKVRIRHSSFSYSGTGAT*AADNXXXXXXXXXXXXXXXI*DSYTK*AGF*ERSRQVLKDYG*GDSFGLNGGYP*TESY*RAGKSISRGSNED*YRIGRAV*EGYGLR*HNNQDKILLVRDADRLHVLYIVFDGVQRVRLHRNGRWKEDICGVGIRLH*TSCRFNGLRKPGKAVSSILHANLDHGDPEW*TGDE*KGHGTAWSTTEI 811 *V FLLSGRDGV*TEIRADI*SCPRKQSES*SRGCGTRKV**GEFLKIR*GRDAGGVNRNRCSAGKVRIRHSSFSYSGTGA *AADNASGGTTRSRYRGGAGI*DSYTK*AGF*ERSRQVLKDYG*GDSFGLNGGYP*TESY*RAGKSISRGSNED*YRIGRAV*EGYGLR*HNNQDKILLVRDADRLHVLYIVFDGVQRVRLHRNGRWKEDICGVGIRLH*TSCRFNGLRKPGKAVSSILHANLDHGDPEW*TGDE*KGHGTAWSTTEI Subject 89 *VWFLLSGRDGV*TEIRADI*SCPRKQSES*SRGCGTRKV**GEFLKIR*GRDAGGVNRNRCSAGKVRIRHSSFSYSGTGAI*AADNASGGTTRSRYRGGAGI*DSYTK*AGF*ERSRQVLKDYG*GDSFGLNGGYP*TESY*RAGKSISRGSNED*YRIGRAV*EGYGLR*HNNQDKILLVRDADRLHVLYIVFDGVQRVRLHRNGRWKEDICGVGIRLH*TSCRFNGLRKPGKAVSSILHANLDHGDPEW*TGDE*KGHGTAWSTTEI 898
Range 7: 956 to 1039 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
60.2 bits(125) | 0.0 | 27/28(96%) | 0/28(0%) | Plus/Plus |
Query 869 NTSMEFS*AAGV*K*DGDGR*HLTQRLP 952 NTSMEFS* AGV*K*DGDGR*HLTQRLP Subject 956 NTSMEFS*TAGV*K*DGDGR*HLTQRLP 1039
Range 8: 712 to 1041 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
250.8 bits(541) | 0.0 | 109/110(99%) | 0/110(0%) | Plus/Plus |
Query 625 MERRYMRCGYTIALNKLPLQRVTKTR*GSI*HTSRQP*SRRP*MVNW**MKRSWHSMEYHRNSFRTRLTAFVRRTICSITTQY*HGI*LGSRRLEIRR*RPITPYTTSSN 954 MERRYMRCGYTIALNKLPLQRVTKTR*GSI*HTSRQP*SRRP*MVNW**MKRSWHSMEYHRNSFRTRLTAFVRRTICSITTQY*HGI*L SRRLEIRR*RPITPYTTSSN Subject 712 MERRYMRCGYTIALNKLPLQRVTKTR*GSI*HTSRQP*SRRP*MVNW**MKRSWHSMEYHRNSFRTRLTAFVRRTICSITTQY*HGI*LDSRRLEIRR*RPITPYTTSSN 1041
Range 9: 352 to 642 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
239.3 bits(516) | 0.0 | 97/97(100%) | 0/97(0%) | Plus/Plus |
Query 265 KWWNHQKPI*GWCRNLRLLHQISWFLRKIQTSS*RLWVRG*LWT*RGLPINRKLLTSREKYQ*R*Q*RLIPHW*SCVRRLWAPMTQQPRQNSSCT*C 555 KWWNHQKPI*GWCRNLRLLHQISWFLRKIQTSS*RLWVRG*LWT*RGLPINRKLLTSREKYQ*R*Q*RLIPHW*SCVRRLWAPMTQQPRQNSSCT*C Subject 352 KWWNHQKPI*GWCRNLRLLHQISWFLRKIQTSS*RLWVRG*LWT*RGLPINRKLLTSREKYQ*R*Q*RLIPHW*SCVRRLWAPMTQQPRQNSSCT*C 642
Range 10: 88 to 300 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
156.9 bits(336) | 0.0 | 70/71(99%) | 0/71(0%) | Plus/Plus |
Query 1 LSAVFVEWTRWRLN*N*GRYMKLSPKTI*ELE*GMRHKESLVRRVS*NTLRTGRRRS*QESL*CRKSTYSP 213 LS VFVEWTRWRLN*N*GRYMKLSPKTI*ELE*GMRHKESLVRRVS*NTLRTGRRRS*QESL*CRKSTYSP Subject 88 LSVVFVEWTRWRLN*N*GRYMKLSPKTI*ELE*GMRHKESLVRRVS*NTLRTGRRRS*QESL*CRKSTYSP 300
Range 11: 550 to 1041 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
378.6 bits(820) | 0.0 | 163/164(99%) | 0/164(0%) | Minus/Minus |
Query 463 VGRRCVRCYRPSPSYF*TPAA*LNSMLVLRRY*TDRTSDERSQSRTERISVVLHAVP*PFHSSPVYHSGSP*SRLA*SMLDTALPGFRNPLKRQLV*CNRIPTPHISSFHRPFLCSRTL*TPSKTM*RTCKRSASRTRRILSWLLCHRSP*PSYTALPMRY*SS 954 VGRRCVRCYRPSPSYF*TPA *LNSMLVLRRY*TDRTSDERSQSRTERISVVLHAVP*PFHSSPVYHSGSP*SRLA*SMLDTALPGFRNPLKRQLV*CNRIPTPHISSFHRPFLCSRTL*TPSKTM*RTCKRSASRTRRILSWLLCHRSP*PSYTALPMRY*SS Subject 550 VGRRCVRCYRPSPSYF*TPAV*LNSMLVLRRY*TDRTSDERSQSRTERISVVLHAVP*PFHSSPVYHSGSP*SRLA*SMLDTALPGFRNPLKRQLV*CNRIPTPHISSFHRPFLCSRTL*TPSKTM*RTCKRSASRTRRILSWLLCHRSP*PSYTALPMRY*SS 1041
Range 12: 90 to 299 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
165.1 bits(354) | 0.0 | 69/70(99%) | 0/70(0%) | Minus/Minus |
Query 3 GEYVLFRHYSDSC*LRLRPVLNVF*ETRLTKLSLCRIPYSNSQIVFGDNFIYLP*FQFKRHRVHSTKTAL 212 GEYVLFRHYSDSC*LRLRPVLNVF*ETRLTKLSLCRIPYSNSQIVFGDNFIYLP*FQFKRHRVHSTKT L Subject 90 GEYVLFRHYSDSC*LRLRPVLNVF*ETRLTKLSLCRIPYSNSQIVFGDNFIYLP*FQFKRHRVHSTKTTL 299
Grapevine leafroll associated virus 3 isolate 3 5 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130284.1 Length: 4711 Number of Matches: 13
Range 1: 354 to 1040 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
564.7 bits(1226) | 0.0 | 228/229(100%) | 0/229(0%) | Minus/Minus |
Query 267 LEDVV*GVIGRHRLISKRLLPS*IPC*YCVVIEQIVRRTNAVNRVRKEFRWYSMLCHDLFIHHQFTIQGRRDQGWREVC*ILPYRVFVTR*SGSLFNAIVYPHRIYLLSIVRFYVVELFELRRRRCKERASDLHHVQEEFCLGCCVIGAHNLLTQLYQCGINLHCYLY*YFSRLVNNFRFMGNPR*VQSYPLTHSL*ELVWIFLKNQLIWCKSLRFRHHPYIGFWWFHH 953 LEDVV*GVIGRHRLISKRLL S*IPC*YCVVIEQIVRRTNAVNRVRKEFRWYSMLCHDLFIHHQFTIQGRRDQGWREVC*ILPYRVFVTR*SGSLFNAIVYPHRIYLLSIVRFYVVELFELRRRRCKERASDLHHVQEEFCLGCCVIGAHNLLTQLYQCGINLHCYLY*YFSRLVNNFRFMGNPR*VQSYPLTHSL*ELVWIFLKNQLIWCKSLRFRHHPYIGFWWFHH Subject 354 LEDVV*GVIGRHRLISKRLLSS*IPC*YCVVIEQIVRRTNAVNRVRKEFRWYSMLCHDLFIHHQFTIQGRRDQGWREVC*ILPYRVFVTR*SGSLFNAIVYPHRIYLLSIVRFYVVELFELRRRRCKERASDLHHVQEEFCLGCCVIGAHNLLTQLYQCGINLHCYLY*YFSRLVNNFRFMGNPR*VQSYPLTHSL*ELVWIFLKNQLIWCKSLRFRHHPYIGFWWFHH 1040
Range 2: 88 to 300 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
166.5 bits(357) | 0.0 | 70/71(99%) | 0/71(0%) | Minus/Minus |
Query 1 WRIRTFPALQRFLLTPPASRP*RILRNSPY*TFLVPHPLL*LSDCFRGQLHISALISVQTPSRPLNKNRTQ 213 WRIRTFPALQRFLLTPPASRP*RILRNSPY*TFLVPHPLL*LSDCFRGQLHISALISVQTPSRPLNKN TQ Subject 88 WRIRTFPALQRFLLTPPASRP*RILRNSPY*TFLVPHPLL*LSDCFRGQLHISALISVQTPSRPLNKNHTQ 300
Range 3: 90 to 1040 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
708.1 bits(1539) | 0.0 | 317/317(100%) | 0/317(0%) | Plus/Plus |
Query 3 ECGFC*VDAMAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFXXXXXXXXXQEPPKQPTTQVVEPPEADIGVVPESETLTPNKLVFEKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDDTTTKTKFFLYVMQIACXXXXXXXXXXKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQ 953 ECGFC*VDAMAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFATAALATAAQEPPKQPTTQVVEPPEADIGVVPESETLTPNKLVFEKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDDTTTKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQ Subject 90 ECGFC*VDAMAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFATAALATAAQEPPKQPTTQVVEPPEADIGVVPESETLTPNKLVFEKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDDTTTKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQ 1040
Range 4: 89 to 673 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
437.3 bits(948) | 0.0 | 195/195(100%) | 0/195(0%) | Minus/Minus |
Query 2 EDDVKNVQAICITYKKNFVLVVVSSEPITFLHSSTNAVLIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLSGSFSKTSLFGVRVSDSGTTPISASGGSTTCVVGCLGGSCXXXXXXXXANTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLRLFSGTTSYICPNFSSNAIASTQQKPHS 586 EDDVKNVQAICITYKKNFVLVVVSSEPITFLHSSTNAVLIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLSGSFSKTSLFGVRVSDSGTTPISASGGSTTCVVGCLGGSCAAVAKAAVANTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLRLFSGTTSYICPNFSSNAIASTQQKPHS Subject 89 EDDVKNVQAICITYKKNFVLVVVSSEPITFLHSSTNAVLIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLSGSFSKTSLFGVRVSDSGTTPISASGGSTTCVVGCLGGSCAAVAKAAVANTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLRLFSGTTSYICPNFSSNAIASTQQKPHS 673
Range 5: 713 to 1039 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
265.5 bits(573) | 0.0 | 109/109(100%) | 0/109(0%) | Minus/Minus |
Query 626 WKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIAYGKNFGGTPCCAMTFSFITSLPFRVAVIKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP 952 WKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIAYGKNFGGTPCCAMTFSFITSLPFRVAVIKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP Subject 713 WKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIAYGKNFGGTPCCAMTFSFITSLPFRVAVIKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP 1039
Range 6: 89 to 898 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
574.3 bits(1247) | 0.0 | 269/270(100%) | 0/270(0%) | Plus/Plus |
Query 2 *VRFLLSGRDGV*TEIRADI*SCPRKQSES*SRGCGTRKV**GEFLKIR*GRDAGGVNRNRCSAGKVRIRHSSFSYSGTGAT*AADNXXXXXXXXXXXXXXXI*DSYTK*AGF*ERSRQVLKDYG*GDSFGLNGGYP*TESY*RAGKSISRGSNED*YRIGRAV*EGYGLR*HNNQDKILLVRDADRLHVLYIVFDGVQRVRLHRNGRWKEDICGVGIRLH*TSCRFNGLRKPGKAVSSILHANLDHGDPEW*TGDE*KGHGTAWSTTEI 811 *V FLLSGRDGV*TEIRADI*SCPRKQSES*SRGCGTRKV**GEFLKIR*GRDAGGVNRNRCSAGKVRIRHSSFSYSGTGAT*AADNASGGTTRSRYRGGAGI*DSYTK*AGF*ERSRQVLKDYG*GDSFGLNGGYP*TESY*RAGKSISRGSNED*YRIGRAV*EGYGLR*HNNQDKILLVRDADRLHVLYIVFDGVQRVRLHRNGRWKEDICGVGIRLH*TSCRFNGLRKPGKAVSSILHANLDHGDPEW*TGDE*KGHGTAWSTTEI Subject 89 *VWFLLSGRDGV*TEIRADI*SCPRKQSES*SRGCGTRKV**GEFLKIR*GRDAGGVNRNRCSAGKVRIRHSSFSYSGTGAT*AADNASGGTTRSRYRGGAGI*DSYTK*AGF*ERSRQVLKDYG*GDSFGLNGGYP*TESY*RAGKSISRGSNED*YRIGRAV*EGYGLR*HNNQDKILLVRDADRLHVLYIVFDGVQRVRLHRNGRWKEDICGVGIRLH*TSCRFNGLRKPGKAVSSILHANLDHGDPEW*TGDE*KGHGTAWSTTEI 898
Range 7: 956 to 1039 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
60.2 bits(125) | 0.0 | 27/28(96%) | 0/28(0%) | Plus/Plus |
Query 869 NTSMEFS*AAGV*K*DGDGR*HLTQRLP 952 NTSMEFS* AGV*K*DGDGR*HLTQRLP Subject 956 NTSMEFS*TAGV*K*DGDGR*HLTQRLP 1039
Range 8: 712 to 1041 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
250.8 bits(541) | 0.0 | 109/110(99%) | 0/110(0%) | Plus/Plus |
Query 625 MERRYMRCGYTIALNKLPLQRVTKTR*GSI*HTSRQP*SRRP*MVNW**MKRSWHSMEYHRNSFRTRLTAFVRRTICSITTQY*HGI*LGSRRLEIRR*RPITPYTTSSN 954 MERRYMRCGYTIALNKLPLQRVTKTR*GSI*HTSRQP*SRRP*MVNW**MKRSWHSMEYHRNSFRTRLTAFVRRTICSITTQY*HGI*L SRRLEIRR*RPITPYTTSSN Subject 712 MERRYMRCGYTIALNKLPLQRVTKTR*GSI*HTSRQP*SRRP*MVNW**MKRSWHSMEYHRNSFRTRLTAFVRRTICSITTQY*HGI*LDSRRLEIRR*RPITPYTTSSN 1041
Range 9: 352 to 642 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
239.3 bits(516) | 0.0 | 97/97(100%) | 0/97(0%) | Plus/Plus |
Query 265 KWWNHQKPI*GWCRNLRLLHQISWFLRKIQTSS*RLWVRG*LWT*RGLPINRKLLTSREKYQ*R*Q*RLIPHW*SCVRRLWAPMTQQPRQNSSCT*C 555 KWWNHQKPI*GWCRNLRLLHQISWFLRKIQTSS*RLWVRG*LWT*RGLPINRKLLTSREKYQ*R*Q*RLIPHW*SCVRRLWAPMTQQPRQNSSCT*C Subject 352 KWWNHQKPI*GWCRNLRLLHQISWFLRKIQTSS*RLWVRG*LWT*RGLPINRKLLTSREKYQ*R*Q*RLIPHW*SCVRRLWAPMTQQPRQNSSCT*C 642
Range 10: 88 to 300 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
156.9 bits(336) | 0.0 | 70/71(99%) | 0/71(0%) | Plus/Plus |
Query 1 LSAVFVEWTRWRLN*N*GRYMKLSPKTI*ELE*GMRHKESLVRRVS*NTLRTGRRRS*QESL*CRKSTYSP 213 LS VFVEWTRWRLN*N*GRYMKLSPKTI*ELE*GMRHKESLVRRVS*NTLRTGRRRS*QESL*CRKSTYSP Subject 88 LSVVFVEWTRWRLN*N*GRYMKLSPKTI*ELE*GMRHKESLVRRVS*NTLRTGRRRS*QESL*CRKSTYSP 300
Range 11: 550 to 1041 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
378.6 bits(820) | 0.0 | 163/164(99%) | 0/164(0%) | Minus/Minus |
Query 463 VGRRCVRCYRPSPSYF*TPAA*LNSMLVLRRY*TDRTSDERSQSRTERISVVLHAVP*PFHSSPVYHSGSP*SRLA*SMLDTALPGFRNPLKRQLV*CNRIPTPHISSFHRPFLCSRTL*TPSKTM*RTCKRSASRTRRILSWLLCHRSP*PSYTALPMRY*SS 954 VGRRCVRCYRPSPSYF*TPA *LNSMLVLRRY*TDRTSDERSQSRTERISVVLHAVP*PFHSSPVYHSGSP*SRLA*SMLDTALPGFRNPLKRQLV*CNRIPTPHISSFHRPFLCSRTL*TPSKTM*RTCKRSASRTRRILSWLLCHRSP*PSYTALPMRY*SS Subject 550 VGRRCVRCYRPSPSYF*TPAV*LNSMLVLRRY*TDRTSDERSQSRTERISVVLHAVP*PFHSSPVYHSGSP*SRLA*SMLDTALPGFRNPLKRQLV*CNRIPTPHISSFHRPFLCSRTL*TPSKTM*RTCKRSASRTRRILSWLLCHRSP*PSYTALPMRY*SS 1041
Range 12: 90 to 299 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
165.1 bits(354) | 0.0 | 69/70(99%) | 0/70(0%) | Minus/Minus |
Query 3 GEYVLFRHYSDSC*LRLRPVLNVF*ETRLTKLSLCRIPYSNSQIVFGDNFIYLP*FQFKRHRVHSTKTAL 212 GEYVLFRHYSDSC*LRLRPVLNVF*ETRLTKLSLCRIPYSNSQIVFGDNFIYLP*FQFKRHRVHSTKT L Subject 90 GEYVLFRHYSDSC*LRLRPVLNVF*ETRLTKLSLCRIPYSNSQIVFGDNFIYLP*FQFKRHRVHSTKTTL 299
Grapevine leafroll associated virus 3 isolate 3 12 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130287.1 Length: 4711 Number of Matches: 13
Range 1: 354 to 1040 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
564.7 bits(1226) | 0.0 | 228/229(100%) | 0/229(0%) | Minus/Minus |
Query 267 LEDVV*GVIGRHRLISKRLLPS*IPC*YCVVIEQIVRRTNAVNRVRKEFRWYSMLCHDLFIHHQFTIQGRRDQGWREVC*ILPYRVFVTR*SGSLFNAIVYPHRIYLLSIVRFYVVELFELRRRRCKERASDLHHVQEEFCLGCCVIGAHNLLTQLYQCGINLHCYLY*YFSRLVNNFRFMGNPR*VQSYPLTHSL*ELVWIFLKNQLIWCKSLRFRHHPYIGFWWFHH 953 LEDVV*GVIGRHRLISKRLL S*IPC*YCVVIEQIVRRTNAVNRVRKEFRWYSMLCHDLFIHHQFTIQGRRDQGWREVC*ILPYRVFVTR*SGSLFNAIVYPHRIYLLSIVRFYVVELFELRRRRCKERASDLHHVQEEFCLGCCVIGAHNLLTQLYQCGINLHCYLY*YFSRLVNNFRFMGNPR*VQSYPLTHSL*ELVWIFLKNQLIWCKSLRFRHHPYIGFWWFHH Subject 354 LEDVV*GVIGRHRLISKRLLSS*IPC*YCVVIEQIVRRTNAVNRVRKEFRWYSMLCHDLFIHHQFTIQGRRDQGWREVC*ILPYRVFVTR*SGSLFNAIVYPHRIYLLSIVRFYVVELFELRRRRCKERASDLHHVQEEFCLGCCVIGAHNLLTQLYQCGINLHCYLY*YFSRLVNNFRFMGNPR*VQSYPLTHSL*ELVWIFLKNQLIWCKSLRFRHHPYIGFWWFHH 1040
Range 2: 88 to 300 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
166.5 bits(357) | 0.0 | 70/71(99%) | 0/71(0%) | Minus/Minus |
Query 1 WRIRTFPALQRFLLTPPASRP*RILRNSPY*TFLVPHPLL*LSDCFRGQLHISALISVQTPSRPLNKNRTQ 213 WRIRTFPALQRFLLTPPASRP*RILRNSPY*TFLVPHPLL*LSDCFRGQLHISALISVQTPSRPLNKN TQ Subject 88 WRIRTFPALQRFLLTPPASRP*RILRNSPY*TFLVPHPLL*LSDCFRGQLHISALISVQTPSRPLNKNHTQ 300
Range 3: 90 to 1040 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
708.1 bits(1539) | 0.0 | 317/317(100%) | 0/317(0%) | Plus/Plus |
Query 3 ECGFC*VDAMAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFXXXXXXXXXQEPPKQPTTQVVEPPEADIGVVPESETLTPNKLVFEKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDDTTTKTKFFLYVMQIACXXXXXXXXXXKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQ 953 ECGFC*VDAMAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFATAALATAAQEPPKQPTTQVVEPPEADIGVVPESETLTPNKLVFEKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDDTTTKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQ Subject 90 ECGFC*VDAMAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFATAALATAAQEPPKQPTTQVVEPPEADIGVVPESETLTPNKLVFEKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDDTTTKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQ 1040
Range 4: 89 to 673 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
437.3 bits(948) | 0.0 | 195/195(100%) | 0/195(0%) | Minus/Minus |
Query 2 EDDVKNVQAICITYKKNFVLVVVSSEPITFLHSSTNAVLIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLSGSFSKTSLFGVRVSDSGTTPISASGGSTTCVVGCLGGSCXXXXXXXXANTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLRLFSGTTSYICPNFSSNAIASTQQKPHS 586 EDDVKNVQAICITYKKNFVLVVVSSEPITFLHSSTNAVLIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLSGSFSKTSLFGVRVSDSGTTPISASGGSTTCVVGCLGGSCAAVAKAAVANTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLRLFSGTTSYICPNFSSNAIASTQQKPHS Subject 89 EDDVKNVQAICITYKKNFVLVVVSSEPITFLHSSTNAVLIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLSGSFSKTSLFGVRVSDSGTTPISASGGSTTCVVGCLGGSCAAVAKAAVANTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLRLFSGTTSYICPNFSSNAIASTQQKPHS 673
Range 5: 713 to 1039 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
265.5 bits(573) | 0.0 | 109/109(100%) | 0/109(0%) | Minus/Minus |
Query 626 WKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIAYGKNFGGTPCCAMTFSFITSLPFRVAVIKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP 952 WKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIAYGKNFGGTPCCAMTFSFITSLPFRVAVIKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP Subject 713 WKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIAYGKNFGGTPCCAMTFSFITSLPFRVAVIKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP 1039
Range 6: 89 to 898 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
574.3 bits(1247) | 0.0 | 269/270(100%) | 0/270(0%) | Plus/Plus |
Query 2 *VRFLLSGRDGV*TEIRADI*SCPRKQSES*SRGCGTRKV**GEFLKIR*GRDAGGVNRNRCSAGKVRIRHSSFSYSGTGAT*AADNXXXXXXXXXXXXXXXI*DSYTK*AGF*ERSRQVLKDYG*GDSFGLNGGYP*TESY*RAGKSISRGSNED*YRIGRAV*EGYGLR*HNNQDKILLVRDADRLHVLYIVFDGVQRVRLHRNGRWKEDICGVGIRLH*TSCRFNGLRKPGKAVSSILHANLDHGDPEW*TGDE*KGHGTAWSTTEI 811 *V FLLSGRDGV*TEIRADI*SCPRKQSES*SRGCGTRKV**GEFLKIR*GRDAGGVNRNRCSAGKVRIRHSSFSYSGTGAT*AADNASGGTTRSRYRGGAGI*DSYTK*AGF*ERSRQVLKDYG*GDSFGLNGGYP*TESY*RAGKSISRGSNED*YRIGRAV*EGYGLR*HNNQDKILLVRDADRLHVLYIVFDGVQRVRLHRNGRWKEDICGVGIRLH*TSCRFNGLRKPGKAVSSILHANLDHGDPEW*TGDE*KGHGTAWSTTEI Subject 89 *VWFLLSGRDGV*TEIRADI*SCPRKQSES*SRGCGTRKV**GEFLKIR*GRDAGGVNRNRCSAGKVRIRHSSFSYSGTGAT*AADNASGGTTRSRYRGGAGI*DSYTK*AGF*ERSRQVLKDYG*GDSFGLNGGYP*TESY*RAGKSISRGSNED*YRIGRAV*EGYGLR*HNNQDKILLVRDADRLHVLYIVFDGVQRVRLHRNGRWKEDICGVGIRLH*TSCRFNGLRKPGKAVSSILHANLDHGDPEW*TGDE*KGHGTAWSTTEI 898
Range 7: 956 to 1039 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
60.2 bits(125) | 0.0 | 27/28(96%) | 0/28(0%) | Plus/Plus |
Query 869 NTSMEFS*AAGV*K*DGDGR*HLTQRLP 952 NTSMEFS* AGV*K*DGDGR*HLTQRLP Subject 956 NTSMEFS*TAGV*K*DGDGR*HLTQRLP 1039
Range 8: 712 to 1041 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
250.8 bits(541) | 0.0 | 109/110(99%) | 0/110(0%) | Plus/Plus |
Query 625 MERRYMRCGYTIALNKLPLQRVTKTR*GSI*HTSRQP*SRRP*MVNW**MKRSWHSMEYHRNSFRTRLTAFVRRTICSITTQY*HGI*LGSRRLEIRR*RPITPYTTSSN 954 MERRYMRCGYTIALNKLPLQRVTKTR*GSI*HTSRQP*SRRP*MVNW**MKRSWHSMEYHRNSFRTRLTAFVRRTICSITTQY*HGI*L SRRLEIRR*RPITPYTTSSN Subject 712 MERRYMRCGYTIALNKLPLQRVTKTR*GSI*HTSRQP*SRRP*MVNW**MKRSWHSMEYHRNSFRTRLTAFVRRTICSITTQY*HGI*LDSRRLEIRR*RPITPYTTSSN 1041
Range 9: 352 to 642 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
239.3 bits(516) | 0.0 | 97/97(100%) | 0/97(0%) | Plus/Plus |
Query 265 KWWNHQKPI*GWCRNLRLLHQISWFLRKIQTSS*RLWVRG*LWT*RGLPINRKLLTSREKYQ*R*Q*RLIPHW*SCVRRLWAPMTQQPRQNSSCT*C 555 KWWNHQKPI*GWCRNLRLLHQISWFLRKIQTSS*RLWVRG*LWT*RGLPINRKLLTSREKYQ*R*Q*RLIPHW*SCVRRLWAPMTQQPRQNSSCT*C Subject 352 KWWNHQKPI*GWCRNLRLLHQISWFLRKIQTSS*RLWVRG*LWT*RGLPINRKLLTSREKYQ*R*Q*RLIPHW*SCVRRLWAPMTQQPRQNSSCT*C 642
Range 10: 88 to 300 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
156.9 bits(336) | 0.0 | 70/71(99%) | 0/71(0%) | Plus/Plus |
Query 1 LSAVFVEWTRWRLN*N*GRYMKLSPKTI*ELE*GMRHKESLVRRVS*NTLRTGRRRS*QESL*CRKSTYSP 213 LS VFVEWTRWRLN*N*GRYMKLSPKTI*ELE*GMRHKESLVRRVS*NTLRTGRRRS*QESL*CRKSTYSP Subject 88 LSVVFVEWTRWRLN*N*GRYMKLSPKTI*ELE*GMRHKESLVRRVS*NTLRTGRRRS*QESL*CRKSTYSP 300
Range 11: 550 to 1041 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
378.6 bits(820) | 0.0 | 163/164(99%) | 0/164(0%) | Minus/Minus |
Query 463 VGRRCVRCYRPSPSYF*TPAA*LNSMLVLRRY*TDRTSDERSQSRTERISVVLHAVP*PFHSSPVYHSGSP*SRLA*SMLDTALPGFRNPLKRQLV*CNRIPTPHISSFHRPFLCSRTL*TPSKTM*RTCKRSASRTRRILSWLLCHRSP*PSYTALPMRY*SS 954 VGRRCVRCYRPSPSYF*TPA *LNSMLVLRRY*TDRTSDERSQSRTERISVVLHAVP*PFHSSPVYHSGSP*SRLA*SMLDTALPGFRNPLKRQLV*CNRIPTPHISSFHRPFLCSRTL*TPSKTM*RTCKRSASRTRRILSWLLCHRSP*PSYTALPMRY*SS Subject 550 VGRRCVRCYRPSPSYF*TPAV*LNSMLVLRRY*TDRTSDERSQSRTERISVVLHAVP*PFHSSPVYHSGSP*SRLA*SMLDTALPGFRNPLKRQLV*CNRIPTPHISSFHRPFLCSRTL*TPSKTM*RTCKRSASRTRRILSWLLCHRSP*PSYTALPMRY*SS 1041
Range 12: 90 to 299 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
165.1 bits(354) | 0.0 | 69/70(99%) | 0/70(0%) | Minus/Minus |
Query 3 GEYVLFRHYSDSC*LRLRPVLNVF*ETRLTKLSLCRIPYSNSQIVFGDNFIYLP*FQFKRHRVHSTKTAL 212 GEYVLFRHYSDSC*LRLRPVLNVF*ETRLTKLSLCRIPYSNSQIVFGDNFIYLP*FQFKRHRVHSTKT L Subject 90 GEYVLFRHYSDSC*LRLRPVLNVF*ETRLTKLSLCRIPYSNSQIVFGDNFIYLP*FQFKRHRVHSTKTTL 299
Grapevine leafroll associated virus 3 isolate 3 13 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130288.1 Length: 4711 Number of Matches: 13
Range 1: 354 to 1040 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
564.7 bits(1226) | 0.0 | 228/229(100%) | 0/229(0%) | Minus/Minus |
Query 267 LEDVV*GVIGRHRLISKRLLPS*IPC*YCVVIEQIVRRTNAVNRVRKEFRWYSMLCHDLFIHHQFTIQGRRDQGWREVC*ILPYRVFVTR*SGSLFNAIVYPHRIYLLSIVRFYVVELFELRRRRCKERASDLHHVQEEFCLGCCVIGAHNLLTQLYQCGINLHCYLY*YFSRLVNNFRFMGNPR*VQSYPLTHSL*ELVWIFLKNQLIWCKSLRFRHHPYIGFWWFHH 953 LEDVV*GVIGRHRLISKRLL S*IPC*YCVVIEQIVRRTNAVNRVRKEFRWYSMLCHDLFIHHQFTIQGRRDQGWREVC*ILPYRVFVTR*SGSLFNAIVYPHRIYLLSIVRFYVVELFELRRRRCKERASDLHHVQEEFCLGCCVIGAHNLLTQLYQCGINLHCYLY*YFSRLVNNFRFMGNPR*VQSYPLTHSL*ELVWIFLKNQLIWCKSLRFRHHPYIGFWWFHH Subject 354 LEDVV*GVIGRHRLISKRLLSS*IPC*YCVVIEQIVRRTNAVNRVRKEFRWYSMLCHDLFIHHQFTIQGRRDQGWREVC*ILPYRVFVTR*SGSLFNAIVYPHRIYLLSIVRFYVVELFELRRRRCKERASDLHHVQEEFCLGCCVIGAHNLLTQLYQCGINLHCYLY*YFSRLVNNFRFMGNPR*VQSYPLTHSL*ELVWIFLKNQLIWCKSLRFRHHPYIGFWWFHH 1040
Range 2: 88 to 300 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
166.5 bits(357) | 0.0 | 70/71(99%) | 0/71(0%) | Minus/Minus |
Query 1 WRIRTFPALQRFLLTPPASRP*RILRNSPY*TFLVPHPLL*LSDCFRGQLHISALISVQTPSRPLNKNRTQ 213 WRIRTFPALQRFLLTPPASRP*RILRNSPY*TFLVPHPLL*LSDCFRGQLHISALISVQTPSRPLNKN TQ Subject 88 WRIRTFPALQRFLLTPPASRP*RILRNSPY*TFLVPHPLL*LSDCFRGQLHISALISVQTPSRPLNKNHTQ 300
Range 3: 90 to 1040 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
708.1 bits(1539) | 0.0 | 317/317(100%) | 0/317(0%) | Plus/Plus |
Query 3 ECGFC*VDAMAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFXXXXXXXXXQEPPKQPTTQVVEPPEADIGVVPESETLTPNKLVFEKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDDTTTKTKFFLYVMQIACXXXXXXXXXXKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQ 953 ECGFC*VDAMAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFATAALATAAQEPPKQPTTQVVEPPEADIGVVPESETLTPNKLVFEKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDDTTTKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQ Subject 90 ECGFC*VDAMAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFATAALATAAQEPPKQPTTQVVEPPEADIGVVPESETLTPNKLVFEKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDDTTTKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQ 1040
Range 4: 89 to 673 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
437.3 bits(948) | 0.0 | 195/195(100%) | 0/195(0%) | Minus/Minus |
Query 2 EDDVKNVQAICITYKKNFVLVVVSSEPITFLHSSTNAVLIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLSGSFSKTSLFGVRVSDSGTTPISASGGSTTCVVGCLGGSCXXXXXXXXANTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLRLFSGTTSYICPNFSSNAIASTQQKPHS 586 EDDVKNVQAICITYKKNFVLVVVSSEPITFLHSSTNAVLIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLSGSFSKTSLFGVRVSDSGTTPISASGGSTTCVVGCLGGSCAAVAKAAVANTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLRLFSGTTSYICPNFSSNAIASTQQKPHS Subject 89 EDDVKNVQAICITYKKNFVLVVVSSEPITFLHSSTNAVLIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLSGSFSKTSLFGVRVSDSGTTPISASGGSTTCVVGCLGGSCAAVAKAAVANTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLRLFSGTTSYICPNFSSNAIASTQQKPHS 673
Range 5: 713 to 1039 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
265.5 bits(573) | 0.0 | 109/109(100%) | 0/109(0%) | Minus/Minus |
Query 626 WKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIAYGKNFGGTPCCAMTFSFITSLPFRVAVIKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP 952 WKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIAYGKNFGGTPCCAMTFSFITSLPFRVAVIKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP Subject 713 WKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIAYGKNFGGTPCCAMTFSFITSLPFRVAVIKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP 1039
Range 6: 89 to 898 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
574.3 bits(1247) | 0.0 | 269/270(100%) | 0/270(0%) | Plus/Plus |
Query 2 *VRFLLSGRDGV*TEIRADI*SCPRKQSES*SRGCGTRKV**GEFLKIR*GRDAGGVNRNRCSAGKVRIRHSSFSYSGTGAT*AADNXXXXXXXXXXXXXXXI*DSYTK*AGF*ERSRQVLKDYG*GDSFGLNGGYP*TESY*RAGKSISRGSNED*YRIGRAV*EGYGLR*HNNQDKILLVRDADRLHVLYIVFDGVQRVRLHRNGRWKEDICGVGIRLH*TSCRFNGLRKPGKAVSSILHANLDHGDPEW*TGDE*KGHGTAWSTTEI 811 *V FLLSGRDGV*TEIRADI*SCPRKQSES*SRGCGTRKV**GEFLKIR*GRDAGGVNRNRCSAGKVRIRHSSFSYSGTGAT*AADNASGGTTRSRYRGGAGI*DSYTK*AGF*ERSRQVLKDYG*GDSFGLNGGYP*TESY*RAGKSISRGSNED*YRIGRAV*EGYGLR*HNNQDKILLVRDADRLHVLYIVFDGVQRVRLHRNGRWKEDICGVGIRLH*TSCRFNGLRKPGKAVSSILHANLDHGDPEW*TGDE*KGHGTAWSTTEI Subject 89 *VWFLLSGRDGV*TEIRADI*SCPRKQSES*SRGCGTRKV**GEFLKIR*GRDAGGVNRNRCSAGKVRIRHSSFSYSGTGAT*AADNASGGTTRSRYRGGAGI*DSYTK*AGF*ERSRQVLKDYG*GDSFGLNGGYP*TESY*RAGKSISRGSNED*YRIGRAV*EGYGLR*HNNQDKILLVRDADRLHVLYIVFDGVQRVRLHRNGRWKEDICGVGIRLH*TSCRFNGLRKPGKAVSSILHANLDHGDPEW*TGDE*KGHGTAWSTTEI 898
Range 7: 956 to 1039 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
60.2 bits(125) | 0.0 | 27/28(96%) | 0/28(0%) | Plus/Plus |
Query 869 NTSMEFS*AAGV*K*DGDGR*HLTQRLP 952 NTSMEFS* AGV*K*DGDGR*HLTQRLP Subject 956 NTSMEFS*TAGV*K*DGDGR*HLTQRLP 1039
Range 8: 712 to 1041 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
250.8 bits(541) | 0.0 | 109/110(99%) | 0/110(0%) | Plus/Plus |
Query 625 MERRYMRCGYTIALNKLPLQRVTKTR*GSI*HTSRQP*SRRP*MVNW**MKRSWHSMEYHRNSFRTRLTAFVRRTICSITTQY*HGI*LGSRRLEIRR*RPITPYTTSSN 954 MERRYMRCGYTIALNKLPLQRVTKTR*GSI*HTSRQP*SRRP*MVNW**MKRSWHSMEYHRNSFRTRLTAFVRRTICSITTQY*HGI*L SRRLEIRR*RPITPYTTSSN Subject 712 MERRYMRCGYTIALNKLPLQRVTKTR*GSI*HTSRQP*SRRP*MVNW**MKRSWHSMEYHRNSFRTRLTAFVRRTICSITTQY*HGI*LDSRRLEIRR*RPITPYTTSSN 1041
Range 9: 352 to 642 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
239.3 bits(516) | 0.0 | 97/97(100%) | 0/97(0%) | Plus/Plus |
Query 265 KWWNHQKPI*GWCRNLRLLHQISWFLRKIQTSS*RLWVRG*LWT*RGLPINRKLLTSREKYQ*R*Q*RLIPHW*SCVRRLWAPMTQQPRQNSSCT*C 555 KWWNHQKPI*GWCRNLRLLHQISWFLRKIQTSS*RLWVRG*LWT*RGLPINRKLLTSREKYQ*R*Q*RLIPHW*SCVRRLWAPMTQQPRQNSSCT*C Subject 352 KWWNHQKPI*GWCRNLRLLHQISWFLRKIQTSS*RLWVRG*LWT*RGLPINRKLLTSREKYQ*R*Q*RLIPHW*SCVRRLWAPMTQQPRQNSSCT*C 642
Range 10: 88 to 300 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
156.9 bits(336) | 0.0 | 70/71(99%) | 0/71(0%) | Plus/Plus |
Query 1 LSAVFVEWTRWRLN*N*GRYMKLSPKTI*ELE*GMRHKESLVRRVS*NTLRTGRRRS*QESL*CRKSTYSP 213 LS VFVEWTRWRLN*N*GRYMKLSPKTI*ELE*GMRHKESLVRRVS*NTLRTGRRRS*QESL*CRKSTYSP Subject 88 LSVVFVEWTRWRLN*N*GRYMKLSPKTI*ELE*GMRHKESLVRRVS*NTLRTGRRRS*QESL*CRKSTYSP 300
Range 11: 550 to 1041 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
378.6 bits(820) | 0.0 | 163/164(99%) | 0/164(0%) | Minus/Minus |
Query 463 VGRRCVRCYRPSPSYF*TPAA*LNSMLVLRRY*TDRTSDERSQSRTERISVVLHAVP*PFHSSPVYHSGSP*SRLA*SMLDTALPGFRNPLKRQLV*CNRIPTPHISSFHRPFLCSRTL*TPSKTM*RTCKRSASRTRRILSWLLCHRSP*PSYTALPMRY*SS 954 VGRRCVRCYRPSPSYF*TPA *LNSMLVLRRY*TDRTSDERSQSRTERISVVLHAVP*PFHSSPVYHSGSP*SRLA*SMLDTALPGFRNPLKRQLV*CNRIPTPHISSFHRPFLCSRTL*TPSKTM*RTCKRSASRTRRILSWLLCHRSP*PSYTALPMRY*SS Subject 550 VGRRCVRCYRPSPSYF*TPAV*LNSMLVLRRY*TDRTSDERSQSRTERISVVLHAVP*PFHSSPVYHSGSP*SRLA*SMLDTALPGFRNPLKRQLV*CNRIPTPHISSFHRPFLCSRTL*TPSKTM*RTCKRSASRTRRILSWLLCHRSP*PSYTALPMRY*SS 1041
Range 12: 90 to 299 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
165.1 bits(354) | 0.0 | 69/70(99%) | 0/70(0%) | Minus/Minus |
Query 3 GEYVLFRHYSDSC*LRLRPVLNVF*ETRLTKLSLCRIPYSNSQIVFGDNFIYLP*FQFKRHRVHSTKTAL 212 GEYVLFRHYSDSC*LRLRPVLNVF*ETRLTKLSLCRIPYSNSQIVFGDNFIYLP*FQFKRHRVHSTKT L Subject 90 GEYVLFRHYSDSC*LRLRPVLNVF*ETRLTKLSLCRIPYSNSQIVFGDNFIYLP*FQFKRHRVHSTKTTL 299
Nucleotide Sequence (342 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
275.5 | 1465.2 | 33% | 1.725e-72 | 99% | KJ174518.1 | |
275.5 | 1465.2 | 33% | 1.725e-72 | 99% | KX701860.1 | |
273.2 | 1455.6 | 33% | 8.44e-72 | 97% | GQ352632.1 | |
273.2 | 1457.4 | 33% | 8.44e-72 | 97% | EU259806.1 | |
273.2 | 1460.1 | 33% | 8.44e-72 | 97% | KX756668.1 |
Alignments
Grapevine leafroll associated virus 3, complete genome
Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 8
Range 1: 4309 to 4650 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
275.5 bits(595) | 0.0 | 113/114(99%) | 0/114(0%) | Plus/Minus |
Query 1 HHHSLRYQRRIHHCHLQEPYHAESQMDPHLRHSRSPGNT*ASHHRHSSPQLVEHKQVEVWYR*ANPL*PKKRLA**AVATS*YSSLAKQPRERRTNYWRTPQTSKCSR*PSPQA 342 HHHSLRYQRRIHHCHLQEPYHAESQMDPHLRHSRSPGNT*AS HRHSSPQLVEHKQVEVWYR*ANPL*PKKRLA**AVATS*YSSLAKQPRERRTNYWRTPQTSKCSR*PSPQA Subject 4309 HHHSLRYQRRIHHCHLQEPYHAESQMDPHLRHSRSPGNT*ASRHRHSSPQLVEHKQVEVWYR*ANPL*PKKRLA**AVATS*YSSLAKQPRERRTNYWRTPQTSKCSR*PSPQA 4650
Range 2: 4311 to 4601 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
242.1 bits(522) | 0.0 | 97/97(100%) | 0/97(0%) | Minus/Plus |
Query 50 LGARASANTWKFGGFSNNWCAVPEVVWRGRSISSLLLPITLGASLVIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTRHDTVP 340 LGARASANTWKFGGFSNNWCAVPEVVWRGRSISSLLLPITLGASLVIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTRHDTVP Subject 4311 LGARASANTWKFGGFSNNWCAVPEVVWRGRSISSLLLPITLGASLVIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTRHDTVP 4601
Range 3: 4310 to 4612 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
236.1 bits(509) | 0.0 | 100/101(99%) | 0/101(0%) | Minus/Plus |
Query 39 AWGEG*REHLEVWGVLQ*LVRRSRGCLAREEYQLVATAYYARRFFGHKGFA*RYHTSTCLCSTS*GEECL**DA*VLPGLRL*RRCGSIWDSA*YGSWR*Q 341 AWGEG*REHLEVWGVLQ*LVRRSRGCLAREEYQLVATAYYARRFFGHKGFA*RYHTSTCLCSTS*GEECL* DA*VLPGLRL*RRCGSIWDSA*YGSWR*Q Subject 4310 AWGEG*REHLEVWGVLQ*LVRRSRGCLAREEYQLVATAYYARRFFGHKGFA*RYHTSTCLCSTS*GEECL*RDA*VLPGLRL*RRCGSIWDSA*YGSWR*Q 4612
Range 4: 4309 to 4650 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
233.8 bits(504) | 0.0 | 113/114(99%) | 0/114(0%) | Minus/Plus |
Query 1 CLGRGLARTLGSLGGSPIIGAPFPRLFGEGGVSXXXXXXXXXXXLWS*GVCLTIPYLNLLMFHQLRGGMSMMRRLGITGTSTMTKVRVHLGLGMIRFLEMTVMDPPLVSQAMMV 342 CLGRGLARTLGSLGGSPIIGAPFPRLFGEGGVSARCYCLLR*ALLWS*GVCLTIPYLNLLMFHQLRGGMSM RRLGITGTSTMTKVRVHLGLGMIRFLEMTVMDPPLVSQAMMV Subject 4309 CLGRGLARTLGSLGGSPIIGAPFPRLFGEGGVSARCYCLLR*ALLWS*GVCLTIPYLNLLMFHQLRGGMSMTRRLGITGTSTMTKVRVHLGLGMIRFLEMTVMDPPLVSQAMMV 4650
Range 5: 4446 to 4649 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
165.6 bits(355) | 0.0 | 67/68(99%) | 0/68(0%) | Plus/Minus |
Query 2 TIIA*DTRGGSITVISRNRIMPSPRWTRTFVIVEVPVIPKRLIIDIPPLNWWNISKLRYGIVKQTPYD 205 TIIA*DTRGGSITVISRNRIMPSPRWTRTFVIVEVPVIPKRL+IDIPPLNWWNISKLRYGIVKQTPYD Subject 4446 TIIA*DTRGGSITVISRNRIMPSPRWTRTFVIVEVPVIPKRLVIDIPPLNWWNISKLRYGIVKQTPYD 4649
Range 6: 4311 to 4406 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
83.1 bits(175) | 0.0 | 32/32(100%) | 0/32(0%) | Plus/Minus |
Query 245 DTPPSPNNLGNGAPIIGEPPKLPSVRASPRPK 340 DTPPSPNNLGNGAPIIGEPPKLPSVRASPRPK Subject 4311 DTPPSPNNLGNGAPIIGEPPKLPSVRASPRPK 4406
Range 7: 4310 to 4516 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
156.4 bits(335) | 0.0 | 69/69(100%) | 0/69(0%) | Plus/Minus |
Query 135 TFLPSTGGT*AS*GMVSLSKPLMTKEAPSVIGSSNELILLPRQTTSGTAHQLLENPPNFQVFALALAPS 341 TFLPSTGGT*AS*GMVSLSKPLMTKEAPSVIGSSNELILLPRQTTSGTAHQLLENPPNFQVFALALAPS Subject 4310 TFLPSTGGT*AS*GMVSLSKPLMTKEAPSVIGSSNELILLPRQTTSGTAHQLLENPPNFQVFALALAPS 4516
Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome
Sequence ID: KX701860.1 Length: 18020 Number of Matches: 8
Range 1: 3827 to 4168 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
275.5 bits(595) | 0.0 | 113/114(99%) | 0/114(0%) | Plus/Minus |
Query 1 HHHSLRYQRRIHHCHLQEPYHAESQMDPHLRHSRSPGNT*ASHHRHSSPQLVEHKQVEVWYR*ANPL*PKKRLA**AVATS*YSSLAKQPRERRTNYWRTPQTSKCSR*PSPQA 342 HHHSLRYQRRIHHCHLQEPYHAESQMDPHLRHSRSPGNT*AS HRHSSPQLVEHKQVEVWYR*ANPL*PKKRLA**AVATS*YSSLAKQPRERRTNYWRTPQTSKCSR*PSPQA Subject 3827 HHHSLRYQRRIHHCHLQEPYHAESQMDPHLRHSRSPGNT*ASRHRHSSPQLVEHKQVEVWYR*ANPL*PKKRLA**AVATS*YSSLAKQPRERRTNYWRTPQTSKCSR*PSPQA 4168
Range 2: 3829 to 4119 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
242.1 bits(522) | 0.0 | 97/97(100%) | 0/97(0%) | Minus/Plus |
Query 50 LGARASANTWKFGGFSNNWCAVPEVVWRGRSISSLLLPITLGASLVIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTRHDTVP 340 LGARASANTWKFGGFSNNWCAVPEVVWRGRSISSLLLPITLGASLVIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTRHDTVP Subject 3829 LGARASANTWKFGGFSNNWCAVPEVVWRGRSISSLLLPITLGASLVIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTRHDTVP 4119
Range 3: 3828 to 4130 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
236.1 bits(509) | 0.0 | 100/101(99%) | 0/101(0%) | Minus/Plus |
Query 39 AWGEG*REHLEVWGVLQ*LVRRSRGCLAREEYQLVATAYYARRFFGHKGFA*RYHTSTCLCSTS*GEECL**DA*VLPGLRL*RRCGSIWDSA*YGSWR*Q 341 AWGEG*REHLEVWGVLQ*LVRRSRGCLAREEYQLVATAYYARRFFGHKGFA*RYHTSTCLCSTS*GEECL* DA*VLPGLRL*RRCGSIWDSA*YGSWR*Q Subject 3828 AWGEG*REHLEVWGVLQ*LVRRSRGCLAREEYQLVATAYYARRFFGHKGFA*RYHTSTCLCSTS*GEECL*RDA*VLPGLRL*RRCGSIWDSA*YGSWR*Q 4130
Range 4: 3827 to 4168 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
233.8 bits(504) | 0.0 | 113/114(99%) | 0/114(0%) | Minus/Plus |
Query 1 CLGRGLARTLGSLGGSPIIGAPFPRLFGEGGVSXXXXXXXXXXXLWS*GVCLTIPYLNLLMFHQLRGGMSMMRRLGITGTSTMTKVRVHLGLGMIRFLEMTVMDPPLVSQAMMV 342 CLGRGLARTLGSLGGSPIIGAPFPRLFGEGGVSARCYCLLR*ALLWS*GVCLTIPYLNLLMFHQLRGGMSM RRLGITGTSTMTKVRVHLGLGMIRFLEMTVMDPPLVSQAMMV Subject 3827 CLGRGLARTLGSLGGSPIIGAPFPRLFGEGGVSARCYCLLR*ALLWS*GVCLTIPYLNLLMFHQLRGGMSMTRRLGITGTSTMTKVRVHLGLGMIRFLEMTVMDPPLVSQAMMV 4168
Range 5: 3964 to 4167 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
165.6 bits(355) | 0.0 | 67/68(99%) | 0/68(0%) | Plus/Minus |
Query 2 TIIA*DTRGGSITVISRNRIMPSPRWTRTFVIVEVPVIPKRLIIDIPPLNWWNISKLRYGIVKQTPYD 205 TIIA*DTRGGSITVISRNRIMPSPRWTRTFVIVEVPVIPKRL+IDIPPLNWWNISKLRYGIVKQTPYD Subject 3964 TIIA*DTRGGSITVISRNRIMPSPRWTRTFVIVEVPVIPKRLVIDIPPLNWWNISKLRYGIVKQTPYD 4167
Range 6: 3829 to 3924 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
83.1 bits(175) | 0.0 | 32/32(100%) | 0/32(0%) | Plus/Minus |
Query 245 DTPPSPNNLGNGAPIIGEPPKLPSVRASPRPK 340 DTPPSPNNLGNGAPIIGEPPKLPSVRASPRPK Subject 3829 DTPPSPNNLGNGAPIIGEPPKLPSVRASPRPK 3924
Range 7: 3828 to 4034 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
156.4 bits(335) | 0.0 | 69/69(100%) | 0/69(0%) | Plus/Minus |
Query 135 TFLPSTGGT*AS*GMVSLSKPLMTKEAPSVIGSSNELILLPRQTTSGTAHQLLENPPNFQVFALALAPS 341 TFLPSTGGT*AS*GMVSLSKPLMTKEAPSVIGSSNELILLPRQTTSGTAHQLLENPPNFQVFALALAPS Subject 3828 TFLPSTGGT*AS*GMVSLSKPLMTKEAPSVIGSSNELILLPRQTTSGTAHQLLENPPNFQVFALALAPS 4034
Grapevine leafroll associated virus 3 isolate 623, complete genome
Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 8
Range 1: 4309 to 4650 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
273.2 bits(590) | 0.0 | 112/114(98%) | 0/114(0%) | Plus/Minus |
Query 1 HHHSLRYQRRIHHCHLQEPYHAESQMDPHLRHSRSPGNT*ASHHRHSSPQLVEHKQVEVWYR*ANPL*PKKRLA**AVATS*YSSLAKQPRERRTNYWRTPQTSKCSR*PSPQA 342 HHHSLRYQRRIHHCHLQEPYHAESQMDPHLRHSRSPGNT*AS HRHSSPQLVEHKQVEVWYR*ANPL*PKKRLA**AVATS*YSSLAKQPRERRTNYWRTPQTSKCS *PSPQA Subject 4309 HHHSLRYQRRIHHCHLQEPYHAESQMDPHLRHSRSPGNT*ASRHRHSSPQLVEHKQVEVWYR*ANPL*PKKRLA**AVATS*YSSLAKQPRERRTNYWRTPQTSKCSH*PSPQA 4650
Range 2: 4311 to 4601 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
242.1 bits(522) | 0.0 | 97/97(100%) | 0/97(0%) | Minus/Plus |
Query 50 LGARASANTWKFGGFSNNWCAVPEVVWRGRSISSLLLPITLGASLVIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTRHDTVP 340 LGARASANTWKFGGFSNNWCAVPEVVWRGRSISSLLLPITLGASLVIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTRHDTVP Subject 4311 LGARASANTWKFGGFSNNWCAVPEVVWRGRSISSLLLPITLGASLVIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTRHDTVP 4601
Range 3: 4310 to 4612 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
232.5 bits(501) | 0.0 | 99/101(98%) | 0/101(0%) | Minus/Plus |
Query 39 AWGEG*REHLEVWGVLQ*LVRRSRGCLAREEYQLVATAYYARRFFGHKGFA*RYHTSTCLCSTS*GEECL**DA*VLPGLRL*RRCGSIWDSA*YGSWR*Q 341 AWGEG* EHLEVWGVLQ*LVRRSRGCLAREEYQLVATAYYARRFFGHKGFA*RYHTSTCLCSTS*GEECL* DA*VLPGLRL*RRCGSIWDSA*YGSWR*Q Subject 4310 AWGEG*CEHLEVWGVLQ*LVRRSRGCLAREEYQLVATAYYARRFFGHKGFA*RYHTSTCLCSTS*GEECL*RDA*VLPGLRL*RRCGSIWDSA*YGSWR*Q 4612
Range 4: 4309 to 4650 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
232.0 bits(500) | 0.0 | 112/114(98%) | 0/114(0%) | Minus/Plus |
Query 1 CLGRGLARTLGSLGGSPIIGAPFPRLFGEGGVSXXXXXXXXXXXLWS*GVCLTIPYLNLLMFHQLRGGMSMMRRLGITGTSTMTKVRVHLGLGMIRFLEMTVMDPPLVSQAMMV 342 CLGRGL RTLGSLGGSPIIGAPFPRLFGEGGVSARCYCLLR*ALLWS*GVCLTIPYLNLLMFHQLRGGMSM RRLGITGTSTMTKVRVHLGLGMIRFLEMTVMDPPLVSQAMMV Subject 4309 CLGRGLVRTLGSLGGSPIIGAPFPRLFGEGGVSARCYCLLR*ALLWS*GVCLTIPYLNLLMFHQLRGGMSMTRRLGITGTSTMTKVRVHLGLGMIRFLEMTVMDPPLVSQAMMV 4650
Range 5: 4446 to 4649 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
165.6 bits(355) | 0.0 | 67/68(99%) | 0/68(0%) | Plus/Minus |
Query 2 TIIA*DTRGGSITVISRNRIMPSPRWTRTFVIVEVPVIPKRLIIDIPPLNWWNISKLRYGIVKQTPYD 205 TIIA*DTRGGSITVISRNRIMPSPRWTRTFVIVEVPVIPKRL+IDIPPLNWWNISKLRYGIVKQTPYD Subject 4446 TIIA*DTRGGSITVISRNRIMPSPRWTRTFVIVEVPVIPKRLVIDIPPLNWWNISKLRYGIVKQTPYD 4649
Range 6: 4311 to 4406 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
81.3 bits(171) | 0.0 | 31/32(97%) | 0/32(0%) | Plus/Minus |
Query 245 DTPPSPNNLGNGAPIIGEPPKLPSVRASPRPK 340 DTPPSPNNLGNGAPIIGEPPKLPSVR SPRPK Subject 4311 DTPPSPNNLGNGAPIIGEPPKLPSVRTSPRPK 4406
Range 7: 4310 to 4516 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
156.4 bits(335) | 0.0 | 69/69(100%) | 0/69(0%) | Plus/Minus |
Query 135 TFLPSTGGT*AS*GMVSLSKPLMTKEAPSVIGSSNELILLPRQTTSGTAHQLLENPPNFQVFALALAPS 341 TFLPSTGGT*AS*GMVSLSKPLMTKEAPSVIGSSNELILLPRQTTSGTAHQLLENPPNFQVFALALAPS Subject 4310 TFLPSTGGT*AS*GMVSLSKPLMTKEAPSVIGSSNELILLPRQTTSGTAHQLLENPPNFQVFALALAPS 4516
Grapevine leafroll associated virus 3 isolate GP18, complete genome
Sequence ID: EU259806.1 Length: 18498 Number of Matches: 8
Range 1: 4309 to 4650 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
273.2 bits(590) | 0.0 | 112/114(98%) | 0/114(0%) | Plus/Minus |
Query 1 HHHSLRYQRRIHHCHLQEPYHAESQMDPHLRHSRSPGNT*ASHHRHSSPQLVEHKQVEVWYR*ANPL*PKKRLA**AVATS*YSSLAKQPRERRTNYWRTPQTSKCSR*PSPQA 342 HHHSLRYQRR HHCHLQEPYHAESQMDPHLRHSRSPGNT*AS HRHSSPQLVEHKQVEVWYR*ANPL*PKKRLA**AVATS*YSSLAKQPRERRTNYWRTPQTSKCSR*PSPQA Subject 4309 HHHSLRYQRRTHHCHLQEPYHAESQMDPHLRHSRSPGNT*ASRHRHSSPQLVEHKQVEVWYR*ANPL*PKKRLA**AVATS*YSSLAKQPRERRTNYWRTPQTSKCSR*PSPQA 4650
Range 2: 4311 to 4601 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
242.1 bits(522) | 0.0 | 97/97(100%) | 0/97(0%) | Minus/Plus |
Query 50 LGARASANTWKFGGFSNNWCAVPEVVWRGRSISSLLLPITLGASLVIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTRHDTVP 340 LGARASANTWKFGGFSNNWCAVPEVVWRGRSISSLLLPITLGASLVIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTRHDTVP Subject 4311 LGARASANTWKFGGFSNNWCAVPEVVWRGRSISSLLLPITLGASLVIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTRHDTVP 4601
Range 3: 4310 to 4612 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
236.1 bits(509) | 0.0 | 100/101(99%) | 0/101(0%) | Minus/Plus |
Query 39 AWGEG*REHLEVWGVLQ*LVRRSRGCLAREEYQLVATAYYARRFFGHKGFA*RYHTSTCLCSTS*GEECL**DA*VLPGLRL*RRCGSIWDSA*YGSWR*Q 341 AWGEG*REHLEVWGVLQ*LVRRSRGCLAREEYQLVATAYYARRFFGHKGFA*RYHTSTCLCSTS*GEECL* DA*VLPGLRL*RRCGSIWDSA*YGSWR*Q Subject 4310 AWGEG*REHLEVWGVLQ*LVRRSRGCLAREEYQLVATAYYARRFFGHKGFA*RYHTSTCLCSTS*GEECL*RDA*VLPGLRL*RRCGSIWDSA*YGSWR*Q 4612
Range 4: 4309 to 4650 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
230.6 bits(497) | 0.0 | 112/114(98%) | 0/114(0%) | Minus/Plus |
Query 1 CLGRGLARTLGSLGGSPIIGAPFPRLFGEGGVSXXXXXXXXXXXLWS*GVCLTIPYLNLLMFHQLRGGMSMMRRLGITGTSTMTKVRVHLGLGMIRFLEMTVMDPPLVSQAMMV 342 CLGRGLARTLGSLGGSPIIGAPFPRLFGEGGVSARCYCLLR*ALLWS*GVCLTIPYLNLLMFHQLRGGMSM RRLGITGTSTMTKVRVHLGLGMIRFLEMTVM PPLVSQAMMV Subject 4309 CLGRGLARTLGSLGGSPIIGAPFPRLFGEGGVSARCYCLLR*ALLWS*GVCLTIPYLNLLMFHQLRGGMSMTRRLGITGTSTMTKVRVHLGLGMIRFLEMTVMGPPLVSQAMMV 4650
Range 5: 4446 to 4649 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
163.3 bits(350) | 0.0 | 66/68(97%) | 0/68(0%) | Plus/Minus |
Query 2 TIIA*DTRGGSITVISRNRIMPSPRWTRTFVIVEVPVIPKRLIIDIPPLNWWNISKLRYGIVKQTPYD 205 TIIA*DTRGG ITVISRNRIMPSPRWTRTFVIVEVPVIPKRL+IDIPPLNWWNISKLRYGIVKQTPYD Subject 4446 TIIA*DTRGGPITVISRNRIMPSPRWTRTFVIVEVPVIPKRLVIDIPPLNWWNISKLRYGIVKQTPYD 4649
Range 6: 4311 to 4406 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
83.1 bits(175) | 0.0 | 32/32(100%) | 0/32(0%) | Plus/Minus |
Query 245 DTPPSPNNLGNGAPIIGEPPKLPSVRASPRPK 340 DTPPSPNNLGNGAPIIGEPPKLPSVRASPRPK Subject 4311 DTPPSPNNLGNGAPIIGEPPKLPSVRASPRPK 4406
Range 7: 4310 to 4516 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
156.4 bits(335) | 0.0 | 69/69(100%) | 0/69(0%) | Plus/Minus |
Query 135 TFLPSTGGT*AS*GMVSLSKPLMTKEAPSVIGSSNELILLPRQTTSGTAHQLLENPPNFQVFALALAPS 341 TFLPSTGGT*AS*GMVSLSKPLMTKEAPSVIGSSNELILLPRQTTSGTAHQLLENPPNFQVFALALAPS Subject 4310 TFLPSTGGT*AS*GMVSLSKPLMTKEAPSVIGSSNELILLPRQTTSGTAHQLLENPPNFQVFALALAPS 4516
Grapevine leafroll associated virus 3 isolate TC BR, complete genome
Sequence ID: KX756668.1 Length: 18498 Number of Matches: 8
Range 1: 4309 to 4650 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
273.2 bits(590) | 0.0 | 112/114(98%) | 0/114(0%) | Plus/Minus |
Query 1 HHHSLRYQRRIHHCHLQEPYHAESQMDPHLRHSRSPGNT*ASHHRHSSPQLVEHKQVEVWYR*ANPL*PKKRLA**AVATS*YSSLAKQPRERRTNYWRTPQTSKCSR*PSPQA 342 HHHSLRYQRRIHHCHLQEPYHAESQMDPHLRHSRSPG+T*AS HRHSSPQLVEHKQVEVWYR*ANPL*PKKRLA**AVATS*YSSLAKQPRERRTNYWRTPQTSKCSR*PSPQA Subject 4309 HHHSLRYQRRIHHCHLQEPYHAESQMDPHLRHSRSPGST*ASRHRHSSPQLVEHKQVEVWYR*ANPL*PKKRLA**AVATS*YSSLAKQPRERRTNYWRTPQTSKCSR*PSPQA 4650
Range 2: 4311 to 4601 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
242.1 bits(522) | 0.0 | 97/97(100%) | 0/97(0%) | Minus/Plus |
Query 50 LGARASANTWKFGGFSNNWCAVPEVVWRGRSISSLLLPITLGASLVIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTRHDTVP 340 LGARASANTWKFGGFSNNWCAVPEVVWRGRSISSLLLPITLGASLVIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTRHDTVP Subject 4311 LGARASANTWKFGGFSNNWCAVPEVVWRGRSISSLLLPITLGASLVIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTRHDTVP 4601
Range 3: 4310 to 4612 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
236.1 bits(509) | 0.0 | 100/101(99%) | 0/101(0%) | Minus/Plus |
Query 39 AWGEG*REHLEVWGVLQ*LVRRSRGCLAREEYQLVATAYYARRFFGHKGFA*RYHTSTCLCSTS*GEECL**DA*VLPGLRL*RRCGSIWDSA*YGSWR*Q 341 AWGEG*REHLEVWGVLQ*LVRRSRGCLAREEYQLVATAYYARRFFGHKGFA*RYHTSTCLCSTS*GEECL* DA*VLPGLRL*RRCGSIWDSA*YGSWR*Q Subject 4310 AWGEG*REHLEVWGVLQ*LVRRSRGCLAREEYQLVATAYYARRFFGHKGFA*RYHTSTCLCSTS*GEECL*RDA*VLPGLRL*RRCGSIWDSA*YGSWR*Q 4612
Range 4: 4309 to 4650 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
231.5 bits(499) | 0.0 | 112/114(98%) | 0/114(0%) | Minus/Plus |
Query 1 CLGRGLARTLGSLGGSPIIGAPFPRLFGEGGVSXXXXXXXXXXXLWS*GVCLTIPYLNLLMFHQLRGGMSMMRRLGITGTSTMTKVRVHLGLGMIRFLEMTVMDPPLVSQAMMV 342 CLGRGLARTLGSLGGSPIIGAPFPRLFGEGGVSARCYCLLR*ALLWS*GVCLTIPYLNLLMFHQLRGGMSM RRLG TGTSTMTKVRVHLGLGMIRFLEMTVMDPPLVSQAMMV Subject 4309 CLGRGLARTLGSLGGSPIIGAPFPRLFGEGGVSARCYCLLR*ALLWS*GVCLTIPYLNLLMFHQLRGGMSMTRRLGTTGTSTMTKVRVHLGLGMIRFLEMTVMDPPLVSQAMMV 4650
Range 5: 4446 to 4649 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
165.1 bits(354) | 0.0 | 66/68(97%) | 0/68(0%) | Plus/Minus |
Query 2 TIIA*DTRGGSITVISRNRIMPSPRWTRTFVIVEVPVIPKRLIIDIPPLNWWNISKLRYGIVKQTPYD 205 TIIA*DTRGGSITVISRNRIMPSPRWTRTFVIVEVPV+PKRL+IDIPPLNWWNISKLRYGIVKQTPYD Subject 4446 TIIA*DTRGGSITVISRNRIMPSPRWTRTFVIVEVPVVPKRLVIDIPPLNWWNISKLRYGIVKQTPYD 4649
Range 6: 4311 to 4406 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
83.1 bits(175) | 0.0 | 32/32(100%) | 0/32(0%) | Plus/Minus |
Query 245 DTPPSPNNLGNGAPIIGEPPKLPSVRASPRPK 340 DTPPSPNNLGNGAPIIGEPPKLPSVRASPRPK Subject 4311 DTPPSPNNLGNGAPIIGEPPKLPSVRASPRPK 4406
Range 7: 4310 to 4516 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
156.4 bits(335) | 0.0 | 69/69(100%) | 0/69(0%) | Plus/Minus |
Query 135 TFLPSTGGT*AS*GMVSLSKPLMTKEAPSVIGSSNELILLPRQTTSGTAHQLLENPPNFQVFALALAPS 341 TFLPSTGGT*AS*GMVSLSKPLMTKEAPSVIGSSNELILLPRQTTSGTAHQLLENPPNFQVFALALAPS Subject 4310 TFLPSTGGT*AS*GMVSLSKPLMTKEAPSVIGSSNELILLPRQTTSGTAHQLLENPPNFQVFALALAPS 4516
Nucleotide Sequence (409 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
296.6 | 1576.4 | 27% | 1.068e-78 | 88% | JX559645.1 | |
296.6 | 1576.4 | 27% | 1.068e-78 | 88% | GQ352631.1 | |
296.6 | 1582.3 | 27% | 1.068e-78 | 88% | GU983863.1 | |
296.6 | 1590.6 | 27% | 1.068e-78 | 89% | EU344893.1 | |
296.6 | 1590.6 | 27% | 1.068e-78 | 89% | KX756669.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 7
Range 1: 5679 to 6071 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
296.6 bits(641) | 0.0 | 122/131(93%) | 0/131(0%) | Minus/Plus |
Query 1 RKGGKVMVMNVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQRAQSQGVTRSITVRSGGKALSEGSGWEVKGRSTYSIWCEQDYVKKCEWLRADNPVMAL 393 RKGGKVMV+NVASGDYFLMPCGFQRTHLHSV+SIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQ+ QSQG TR+IT +SGGKALSEGSG EVKGRSTYSIWCEQDYVKKCEWLRADNPVMAL Subject 5679 RKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMAL 6071
Range 2: 5675 to 6070 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
288.4 bits(623) | 0.0 | 120/132(91%) | 0/132(0%) | Plus/Minus |
Query 2 RAITGLSALSHSHFLT*SCSHHIEYVDLPLTSQPLPSDRALPPDLTVIDLVTP*LCARWFGTPGDFSSDTPPANCNILPTPNTRRVALNVKLIRPSSIELTECKCVL*KPQGIRK*SPEATFMTMTFPPFLH 397 RAITGLSALSHSHFLT*SCSHHIEYVDLPLTS PLPSDRALPPD VI LV P LC WFGTPGDFSSDTPPANCNILPTP TRRVALNVKL+RPSSIE TECKCVL*KPQGIRK*SPEATFMTMT PPFLH Subject 5675 RAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLH 6070
Range 3: 5680 to 6069 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
261.8 bits(565) | 0.0 | 117/130(90%) | 0/130(0%) | Minus/Plus |
Query 3 GRVGRSWS*T*LRVTIFLCLAVFKGRTCIQ*ALSTKGVSV*RSGQLGACLV*AGCCS*PAACRMRNRQVFQTSVHRVKVLPDQSL*DRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WL 392 GRV RSWS*T*LRVTIFLCLAVFKGRTCIQ* LSTKG SV*RSGQLGA LV*AGCCS*PAACRMR+ QVFQTS HR KVLP+QS ++GARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WL Subject 5680 GRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRSHQVFQTSNHRAKVLPEQSHQNQGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WL 6069
Range 4: 5706 to 6071 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
255.8 bits(552) | 0.0 | 107/122(88%) | 0/122(0%) | Plus/Minus |
Query 1 KSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRSYSD*SGNTLTLCTLVWNTWRFLIRHAAG*LQHPAYTKHAPSCPERQTDTPFVDRAH*MQVRPLKTARHKKIVTRSYV 366 KSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAP + D SG+TL L LVWNTW LIRHAAG*LQHPAYTK APSCPERQTD PFVDR +*MQVRPLKTARHKKIVTRSYV Subject 5706 KSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAP*FWCDCSGSTLALWLLVWNTW*LLIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYV 6071
Range 5: 5708 to 6070 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
249.4 bits(538) | 0.0 | 110/121(91%) | 0/121(0%) | Minus/Plus |
Query 2 RSFG*LFSYALRFSKDALAFSELYRRRAYQFDVQGNSARVWCRQDVAVSRRRVG*EIARCSKPACTESRCYQINHCKIGGQGSI*GKWLGSQGEVDILDMVRTRLR*EV*VAQG**SSDGS 364 RSFG*LFSYALRFSKDALAFS+LYRRRA+QFDVQGNSAR+WCRQDVAVSRRRVG*E+ RCSKPA TE RCYQ NH KI GQGSI*GKW GSQGEVDILDMVRTRLR*EV*VAQG**SSDGS Subject 5708 RSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EVTRCSKPATTEPRCYQNNHTKIRGQGSI*GKW*GSQGEVDILDMVRTRLR*EV*VAQG**SSDGS 6070
Range 6: 5794 to 6069 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
186.6 bits(401) | 0.0 | 83/92(90%) | 0/92(0%) | Plus/Minus |
Query 3 EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPNHFPQIEPCPPILQ*LIW*HLDSVHAGLEHLAISHPTRRRLTATSCLHQTRAELP*TSN* 278 EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LP HFPQIEPCP IL *L W*HL SV AGLEHL SHPTRRRLTATSCLHQ RAELP*TSN* Subject 5794 EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPLILV*LFW*HLGSVVAGLEHLVTSHPTRRRLTATSCLHQRRAELP*TSN* 6069
Grapevine leafroll associated virus 3 isolate 621, complete genome
Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 7
Range 1: 5679 to 6071 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
296.6 bits(641) | 0.0 | 122/131(93%) | 0/131(0%) | Minus/Plus |
Query 1 RKGGKVMVMNVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQRAQSQGVTRSITVRSGGKALSEGSGWEVKGRSTYSIWCEQDYVKKCEWLRADNPVMAL 393 RKGGKVMV+NVASGDYFLMPCGFQRTHLHSV+SIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQ+ QSQG TR+IT +SGGKALSEGSG EVKGRSTYSIWCEQDYVKKCEWLRADNPVMAL Subject 5679 RKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMAL 6071
Range 2: 5675 to 6070 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
288.4 bits(623) | 0.0 | 120/132(91%) | 0/132(0%) | Plus/Minus |
Query 2 RAITGLSALSHSHFLT*SCSHHIEYVDLPLTSQPLPSDRALPPDLTVIDLVTP*LCARWFGTPGDFSSDTPPANCNILPTPNTRRVALNVKLIRPSSIELTECKCVL*KPQGIRK*SPEATFMTMTFPPFLH 397 RAITGLSALSHSHFLT*SCSHHIEYVDLPLTS PLPSDRALPPD VI LV P LC WFGTPGDFSSDTPPANCNILPTP TRRVALNVKL+RPSSIE TECKCVL*KPQGIRK*SPEATFMTMT PPFLH Subject 5675 RAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLH 6070
Range 3: 5680 to 6069 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
261.8 bits(565) | 0.0 | 117/130(90%) | 0/130(0%) | Minus/Plus |
Query 3 GRVGRSWS*T*LRVTIFLCLAVFKGRTCIQ*ALSTKGVSV*RSGQLGACLV*AGCCS*PAACRMRNRQVFQTSVHRVKVLPDQSL*DRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WL 392 GRV RSWS*T*LRVTIFLCLAVFKGRTCIQ* LSTKG SV*RSGQLGA LV*AGCCS*PAACRMR+ QVFQTS HR KVLP+QS ++GARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WL Subject 5680 GRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRSHQVFQTSNHRAKVLPEQSHQNQGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WL 6069
Range 4: 5706 to 6071 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
255.8 bits(552) | 0.0 | 107/122(88%) | 0/122(0%) | Plus/Minus |
Query 1 KSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRSYSD*SGNTLTLCTLVWNTWRFLIRHAAG*LQHPAYTKHAPSCPERQTDTPFVDRAH*MQVRPLKTARHKKIVTRSYV 366 KSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAP + D SG+TL L LVWNTW LIRHAAG*LQHPAYTK APSCPERQTD PFVDR +*MQVRPLKTARHKKIVTRSYV Subject 5706 KSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAP*FWCDCSGSTLALWLLVWNTW*LLIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYV 6071
Range 5: 5708 to 6070 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
249.4 bits(538) | 0.0 | 110/121(91%) | 0/121(0%) | Minus/Plus |
Query 2 RSFG*LFSYALRFSKDALAFSELYRRRAYQFDVQGNSARVWCRQDVAVSRRRVG*EIARCSKPACTESRCYQINHCKIGGQGSI*GKWLGSQGEVDILDMVRTRLR*EV*VAQG**SSDGS 364 RSFG*LFSYALRFSKDALAFS+LYRRRA+QFDVQGNSAR+WCRQDVAVSRRRVG*E+ RCSKPA TE RCYQ NH KI GQGSI*GKW GSQGEVDILDMVRTRLR*EV*VAQG**SSDGS Subject 5708 RSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EVTRCSKPATTEPRCYQNNHTKIRGQGSI*GKW*GSQGEVDILDMVRTRLR*EV*VAQG**SSDGS 6070
Range 6: 5794 to 6069 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
186.6 bits(401) | 0.0 | 83/92(90%) | 0/92(0%) | Plus/Minus |
Query 3 EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPNHFPQIEPCPPILQ*LIW*HLDSVHAGLEHLAISHPTRRRLTATSCLHQTRAELP*TSN* 278 EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LP HFPQIEPCP IL *L W*HL SV AGLEHL SHPTRRRLTATSCLHQ RAELP*TSN* Subject 5794 EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPLILV*LFW*HLGSVVAGLEHLVTSHPTRRRLTATSCLHQRRAELP*TSN* 6069
Grapevine leafroll associated virus 3 isolate WA MR, complete genome
Sequence ID: GU983863.1 Length: 18498 Number of Matches: 7
Range 1: 5679 to 6071 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
296.6 bits(641) | 0.0 | 122/131(93%) | 0/131(0%) | Minus/Plus |
Query 1 RKGGKVMVMNVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQRAQSQGVTRSITVRSGGKALSEGSGWEVKGRSTYSIWCEQDYVKKCEWLRADNPVMAL 393 RKGGKVMV+NVASGDYFLMPCGFQRTHLHSV+SIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQ+ QSQG TR+IT +SGGKALSEGSG EVKGRSTYSIWCEQDYVKKCEWLRADNPVMAL Subject 5679 RKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGKEVKGRSTYSIWCEQDYVKKCEWLRADNPVMAL 6071
Range 2: 5675 to 6070 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
288.4 bits(623) | 0.0 | 120/132(91%) | 0/132(0%) | Plus/Minus |
Query 2 RAITGLSALSHSHFLT*SCSHHIEYVDLPLTSQPLPSDRALPPDLTVIDLVTP*LCARWFGTPGDFSSDTPPANCNILPTPNTRRVALNVKLIRPSSIELTECKCVL*KPQGIRK*SPEATFMTMTFPPFLH 397 RAITGLSALSHSHFLT*SCSHHIEYVDLPLTS PLPSDRALPPD VI LV P LC WFGTPGDFSSDTPPANCNILPTP TRRVALNVKL+RPSSIE TECKCVL*KPQGIRK*SPEATFMTMT PPFLH Subject 5675 RAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLH 6070
Range 3: 5680 to 6069 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
260.0 bits(561) | 0.0 | 117/130(90%) | 0/130(0%) | Minus/Plus |
Query 3 GRVGRSWS*T*LRVTIFLCLAVFKGRTCIQ*ALSTKGVSV*RSGQLGACLV*AGCCS*PAACRMRNRQVFQTSVHRVKVLPDQSL*DRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WL 392 GRV RSWS*T*LRVTIFLCLAVFKGRTCIQ* LSTKG SV*RSGQLGA LV*AGCCS*PAACRMR+ QVFQTS HR KVLP+QS +RGARLYLREVV KSRGGRHTRYGANKITLRSVSGSGLIIQ*WL Subject 5680 GRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRSHQVFQTSNHRAKVLPEQSHQNRGARLYLREVVRKSRGGRHTRYGANKITLRSVSGSGLIIQ*WL 6069
Range 4: 5706 to 6071 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
255.4 bits(551) | 0.0 | 107/122(88%) | 0/122(0%) | Plus/Minus |
Query 1 KSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRSYSD*SGNTLTLCTLVWNTWRFLIRHAAG*LQHPAYTKHAPSCPERQTDTPFVDRAH*MQVRPLKTARHKKIVTRSYV 366 KSHHWIISPEPLTLLNVILFAPYRVCRPPLDF TTSLR*SLAPR + D SG+TL L LVWNTW LIRHAAG*LQHPAYTK APSCPERQTD PFVDR +*MQVRPLKTARHKKIVTRSYV Subject 5706 KSHHWIISPEPLTLLNVILFAPYRVCRPPLDFLTTSLR*SLAPRFWCDCSGSTLALWLLVWNTW*LLIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYV 6071
Range 5: 5708 to 6070 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
253.1 bits(546) | 0.0 | 111/121(92%) | 0/121(0%) | Minus/Plus |
Query 2 RSFG*LFSYALRFSKDALAFSELYRRRAYQFDVQGNSARVWCRQDVAVSRRRVG*EIARCSKPACTESRCYQINHCKIGGQGSI*GKWLGSQGEVDILDMVRTRLR*EV*VAQG**SSDGS 364 RSFG*LFSYALRFSKDALAFS+LYRRRA+QFDVQGNSAR+WCRQDVAVSRRRVG*E+ RCSKPA TE RCYQ NH KIGGQGSI*GKW GSQGEVDILDMVRTRLR*EV*VAQG**SSDGS Subject 5708 RSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EVTRCSKPATTEPRCYQNNHTKIGGQGSI*GKW*GSQGEVDILDMVRTRLR*EV*VAQG**SSDGS 6070
Range 6: 5794 to 6069 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
191.2 bits(411) | 0.0 | 84/92(91%) | 0/92(0%) | Plus/Minus |
Query 3 EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPNHFPQIEPCPPILQ*LIW*HLDSVHAGLEHLAISHPTRRRLTATSCLHQTRAELP*TSN* 278 EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LP HFPQIEPCPPIL *L W*HL SV AGLEHL SHPTRRRLTATSCLHQ RAELP*TSN* Subject 5794 EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLVTSHPTRRRLTATSCLHQRRAELP*TSN* 6069
Grapevine leafroll associated virus 3 isolate Cl 766, complete genome
Sequence ID: EU344893.1 Length: 17919 Number of Matches: 7
Range 1: 5100 to 5492 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
296.6 bits(641) | 0.0 | 122/131(93%) | 0/131(0%) | Minus/Plus |
Query 1 RKGGKVMVMNVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQRAQSQGVTRSITVRSGGKALSEGSGWEVKGRSTYSIWCEQDYVKKCEWLRADNPVMAL 393 RKGGKVMV+NVASGDYFLMPCGFQRTHLHSV+SIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQ+ QSQG TR+IT +SGGKALSEGSG EVKGRSTYSIWCEQDYVKKCEWLRADNPVMAL Subject 5100 RKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMAL 5492
Range 2: 5096 to 5491 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
288.4 bits(623) | 0.0 | 120/132(91%) | 0/132(0%) | Plus/Minus |
Query 2 RAITGLSALSHSHFLT*SCSHHIEYVDLPLTSQPLPSDRALPPDLTVIDLVTP*LCARWFGTPGDFSSDTPPANCNILPTPNTRRVALNVKLIRPSSIELTECKCVL*KPQGIRK*SPEATFMTMTFPPFLH 397 RAITGLSALSHSHFLT*SCSHHIEYVDLPLTS PLPSDRALPPD VI LV P LC WFGTPGDFSSDTPPANCNILPTP TRRVALNVKL+RPSSIE TECKCVL*KPQGIRK*SPEATFMTMT PPFLH Subject 5096 RAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLH 5491
Range 3: 5101 to 5490 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
263.6 bits(569) | 0.0 | 118/130(91%) | 0/130(0%) | Minus/Plus |
Query 3 GRVGRSWS*T*LRVTIFLCLAVFKGRTCIQ*ALSTKGVSV*RSGQLGACLV*AGCCS*PAACRMRNRQVFQTSVHRVKVLPDQSL*DRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WL 392 GRV RSWS*T*LRVTIFLCLAVFKGRTCIQ* LSTKG SV*RSGQLGA LV*AGCCS*PAACRMR+ QVFQTS HR KVLP+QS +RGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WL Subject 5101 GRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRSHQVFQTSNHRAKVLPEQSHQNRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WL 5490
Range 4: 5127 to 5492 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
260.0 bits(561) | 0.0 | 108/122(89%) | 0/122(0%) | Plus/Minus |
Query 1 KSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRSYSD*SGNTLTLCTLVWNTWRFLIRHAAG*LQHPAYTKHAPSCPERQTDTPFVDRAH*MQVRPLKTARHKKIVTRSYV 366 KSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPR + D SG+TL L LVWNTW LIRHAAG*LQHPAYTK APSCPERQTD PFVDR +*MQVRPLKTARHKKIVTRSYV Subject 5127 KSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRFWCDCSGSTLALWLLVWNTW*LLIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYV 5492
Range 5: 5129 to 5491 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
253.1 bits(546) | 0.0 | 111/121(92%) | 0/121(0%) | Minus/Plus |
Query 2 RSFG*LFSYALRFSKDALAFSELYRRRAYQFDVQGNSARVWCRQDVAVSRRRVG*EIARCSKPACTESRCYQINHCKIGGQGSI*GKWLGSQGEVDILDMVRTRLR*EV*VAQG**SSDGS 364 RSFG*LFSYALRFSKDALAFS+LYRRRA+QFDVQGNSAR+WCRQDVAVSRRRVG*E+ RCSKPA TE RCYQ NH KIGGQGSI*GKW GSQGEVDILDMVRTRLR*EV*VAQG**SSDGS Subject 5129 RSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EVTRCSKPATTEPRCYQNNHTKIGGQGSI*GKW*GSQGEVDILDMVRTRLR*EV*VAQG**SSDGS 5491
Range 6: 5215 to 5490 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
191.2 bits(411) | 0.0 | 84/92(91%) | 0/92(0%) | Plus/Minus |
Query 3 EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPNHFPQIEPCPPILQ*LIW*HLDSVHAGLEHLAISHPTRRRLTATSCLHQTRAELP*TSN* 278 EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LP HFPQIEPCPPIL *L W*HL SV AGLEHL SHPTRRRLTATSCLHQ RAELP*TSN* Subject 5215 EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLVTSHPTRRRLTATSCLHQRRAELP*TSN* 5490
Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome
Sequence ID: KX756669.1 Length: 18313 Number of Matches: 7
Range 1: 5494 to 5886 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
296.6 bits(641) | 0.0 | 122/131(93%) | 0/131(0%) | Minus/Plus |
Query 1 RKGGKVMVMNVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQRAQSQGVTRSITVRSGGKALSEGSGWEVKGRSTYSIWCEQDYVKKCEWLRADNPVMAL 393 RKGGKVMV+NVASGDYFLMPCGFQRTHLHSV+SIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQ+ QSQG TR+IT +SGGKALSEGSG EVKGRSTYSIWCEQDYVKKCEWLRADNPVMAL Subject 5494 RKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMAL 5886
Range 2: 5490 to 5885 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
288.4 bits(623) | 0.0 | 120/132(91%) | 0/132(0%) | Plus/Minus |
Query 2 RAITGLSALSHSHFLT*SCSHHIEYVDLPLTSQPLPSDRALPPDLTVIDLVTP*LCARWFGTPGDFSSDTPPANCNILPTPNTRRVALNVKLIRPSSIELTECKCVL*KPQGIRK*SPEATFMTMTFPPFLH 397 RAITGLSALSHSHFLT*SCSHHIEYVDLPLTS PLPSDRALPPD VI LV P LC WFGTPGDFSSDTPPANCNILPTP TRRVALNVKL+RPSSIE TECKCVL*KPQGIRK*SPEATFMTMT PPFLH Subject 5490 RAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLH 5885
Range 3: 5495 to 5884 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
263.6 bits(569) | 0.0 | 118/130(91%) | 0/130(0%) | Minus/Plus |
Query 3 GRVGRSWS*T*LRVTIFLCLAVFKGRTCIQ*ALSTKGVSV*RSGQLGACLV*AGCCS*PAACRMRNRQVFQTSVHRVKVLPDQSL*DRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WL 392 GRV RSWS*T*LRVTIFLCLAVFKGRTCIQ* LSTKG SV*RSGQLGA LV*AGCCS*PAACRMR+ QVFQTS HR KVLP+QS +RGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WL Subject 5495 GRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRSHQVFQTSNHRAKVLPEQSHQNRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WL 5884
Range 4: 5521 to 5886 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
260.0 bits(561) | 0.0 | 108/122(89%) | 0/122(0%) | Plus/Minus |
Query 1 KSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRSYSD*SGNTLTLCTLVWNTWRFLIRHAAG*LQHPAYTKHAPSCPERQTDTPFVDRAH*MQVRPLKTARHKKIVTRSYV 366 KSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPR + D SG+TL L LVWNTW LIRHAAG*LQHPAYTK APSCPERQTD PFVDR +*MQVRPLKTARHKKIVTRSYV Subject 5521 KSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRFWCDCSGSTLALWLLVWNTW*LLIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYV 5886
Range 5: 5523 to 5885 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
253.1 bits(546) | 0.0 | 111/121(92%) | 0/121(0%) | Minus/Plus |
Query 2 RSFG*LFSYALRFSKDALAFSELYRRRAYQFDVQGNSARVWCRQDVAVSRRRVG*EIARCSKPACTESRCYQINHCKIGGQGSI*GKWLGSQGEVDILDMVRTRLR*EV*VAQG**SSDGS 364 RSFG*LFSYALRFSKDALAFS+LYRRRA+QFDVQGNSAR+WCRQDVAVSRRRVG*E+ RCSKPA TE RCYQ NH KIGGQGSI*GKW GSQGEVDILDMVRTRLR*EV*VAQG**SSDGS Subject 5523 RSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EVTRCSKPATTEPRCYQNNHTKIGGQGSI*GKW*GSQGEVDILDMVRTRLR*EV*VAQG**SSDGS 5885
Range 6: 5609 to 5884 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
191.2 bits(411) | 0.0 | 84/92(91%) | 0/92(0%) | Plus/Minus |
Query 3 EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPNHFPQIEPCPPILQ*LIW*HLDSVHAGLEHLAISHPTRRRLTATSCLHQTRAELP*TSN* 278 EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LP HFPQIEPCPPIL *L W*HL SV AGLEHL SHPTRRRLTATSCLHQ RAELP*TSN* Subject 5609 EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLVTSHPTRRRLTATSCLHQRRAELP*TSN* 5884
Nucleotide Sequence (1792 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
401.1 | 6624.1 | 40% | 0 | 41% | KM058745.1 | |
168.3 | 1737.5 | 19% | 1.89e-71 | 37% | KX756668.1 | |
166.5 | 1595.4 | 17% | 4.086e-70 | 29% | GU983863.1 | |
168.3 | 1649.0 | 19% | 9.176e-70 | 37% | KX701860.1 | |
165.1 | 1697.4 | 22% | 1.027e-69 | 37% | GQ352632.1 |
Alignments
Grapevine leafroll associated virus 3 isolate GH24, complete genome
Sequence ID: KM058745.1 Length: 18493 Number of Matches: 47
Range 1: 9113 to 9448 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
279.2 bits(603) | 0.0 | 112/112(100%) | 0/112(0%) | Plus/Minus |
Query 386 SPHLCTDESRKGTPKEKTLYCTSQAGINLTD*TKRKNTSTPRKERTTKRPSYKK**DENKKCHWYCPHRWHA*KRKLKPKTKEGSPLVLTSQMARLEDRNKGIHDL*YDKHP 721 SPHLCTDESRKGTPKEKTLYCTSQAGINLTD*TKRKNTSTPRKERTTKRPSYKK**DENKKCHWYCPHRWHA*KRKLKPKTKEGSPLVLTSQMARLEDRNKGIHDL*YDKHP Subject 9113 SPHLCTDESRKGTPKEKTLYCTSQAGINLTD*TKRKNTSTPRKERTTKRPSYKK**DENKKCHWYCPHRWHA*KRKLKPKTKEGSPLVLTSQMARLEDRNKGIHDL*YDKHP 9448
Range 2: 750 to 1115 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
278.3 bits(601) | 0.0 | 121/122(99%) | 0/122(0%) | Plus/Minus |
Query 724 RMRDRFKRNGLIRTIGNVRRV*PSH*LDFLAVRPNRHTIAAN*GELPSIAVNG*WGKYTLHPLGELTNINVSGALRRKIDYFSAAGRFKVNYELINVTISLIKPVKLQSGVNVRKGELTQNT 1089 RMRDRFKRNGLIRTIGNVRRV*PSH*LDFLAVRPN HTIAAN*GELPSIAVNG*WGKYTLHPLGELTNINVSGALRRKIDYFSAAGRFKVNYELINVTISLIKPVKLQSGVNVRKGELTQNT Subject 750 RMRDRFKRNGLIRTIGNVRRV*PSH*LDFLAVRPNCHTIAAN*GELPSIAVNG*WGKYTLHPLGELTNINVSGALRRKIDYFSAAGRFKVNYELINVTISLIKPVKLQSGVNVRKGELTQNT 1115
Range 3: 9490 to 9831 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
277.4 bits(599) | 0.0 | 114/114(100%) | 0/114(0%) | Plus/Minus |
Query 3 TPLYLQSPALSAPF*AGCWTPNRGYPRANAQMRSRNQHVRLTW*LRC*T*TLPSSPKDSLDSTAVHDLNKCSAN*HVHEPNPTLPAL*KSRLLATCWTLTYPDATRKVTTHGVL 344 TPLYLQSPALSAPF*AGCWTPNRGYPRANAQMRSRNQHVRLTW*LRC*T*TLPSSPKDSLDSTAVHDLNKCSAN*HVHEPNPTLPAL*KSRLLATCWTLTYPDATRKVTTHGVL Subject 9490 TPLYLQSPALSAPF*AGCWTPNRGYPRANAQMRSRNQHVRLTW*LRC*T*TLPSSPKDSLDSTAVHDLNKCSAN*HVHEPNPTLPAL*KSRLLATCWTLTYPDATRKVTTHGVL 9831
Range 4: 9335 to 9676 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
275.1 bits(594) | 0.0 | 114/114(100%) | 0/114(0%) | Minus/Plus |
Query 158 CIFSFSLVREVNTGLTCTVESFFFWGTLPTFVGA*MGRNFLLYLWDDWRYYDSTPCVVTFLVASG*VRVQQVANSLLF*SAGSVGFGSCTC*LAEHLFRSCTAVESSESLGDDG 499 CIFSFSLVREVNTGLTCTVESFFFWGTLPTFVGA*MGRNFLLYLWDDWRYYDSTPCVVTFLVASG*VRVQQVANSLLF*SAGSVGFGSCTC*LAEHLFRSCTAVESSESLGDDG Subject 9335 CIFSFSLVREVNTGLTCTVESFFFWGTLPTFVGA*MGRNFLLYLWDDWRYYDSTPCVVTFLVASG*VRVQQVANSLLF*SAGSVGFGSCTC*LAEHLFRSCTAVESSESLGDDG 9676
Range 5: 66 to 512 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
273.7 bits(591) | 0.0 | 147/149(99%) | 0/149(0%) | Minus/Plus |
Query 1302 VLCIFFLSIWVVFGFSYCLSYILKTKKYFLPVVFCLAVFIFPY*SEKQKIFLPLCGVASC*VFLQVSIVCFWVFIFRTYFRI*FS*L*A*RXXXXXXXXXXXXXXFPSSKCGKLPFSVFI*V*SXXXXXXXXLNSCLSFNFELVLVIYP 1748 V C FFLSIWVVFGFSYCLSYILKTKKYFLPVVFCLAVFIFPY*SEKQKIFLPLCGVASC*VFLQVSIVCFWVFIFRTYFRI*FS*L*A*RVFYFCFFVFFVFPVFPSSKCGKLPFSVFI*V*SF*VFLLFKLNSCLSFNFELVLVIYP Subject 66 VPCTFFLSIWVVFGFSYCLSYILKTKKYFLPVVFCLAVFIFPY*SEKQKIFLPLCGVASC*VFLQVSIVCFWVFIFRTYFRI*FS*L*A*RVFYFCFFVFFVFPVFPSSKCGKLPFSVFI*V*SF*VFLLFKLNSCLSFNFELVLVIYP 512
Range 6: 383 to 724 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
258.1 bits(557) | 0.0 | 113/114(99%) | 0/114(0%) | Plus/Minus |
Query 1090 KTKTKER*ANRTTLNKNRRERNS*KIRKKVLQTRP*IKLEEKVLTLRKG*KYYQHHKRKNEKRRSYLQEKEGYITNTNSKLKDKHEFNLNRRKT*ND*T*IKTLKGNLPHLELG 1431 KTKTKER*ANRTTLNKNRRERNS*KIRKKVLQTRP*IKLEEKVLTLRKG KYYQHHKRKNEKRRSYLQEKEGYITNTNSKLKDKHEFNLNRRKT*ND*T*IKTLKGNLPHLELG Subject 383 KTKTKER*ANRTTLNKNRRERNS*KIRKKVLQTRP*IKLEEKVLTLRKGKKYYQHHKRKNEKRRSYLQEKEGYITNTNSKLKDKHEFNLNRRKT*ND*T*IKTLKGNLPHLELG 724
Range 7: 778 to 1116 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
251.2 bits(542) | 0.0 | 112/113(99%) | 0/113(0%) | Minus/Plus |
Query 723 TLTPLWSFTGLIREIVTLISS*LTLNRPAALK*SIFLRSAPLTFILVSSPKG*SVYLPHHPLTAILGNSP*LAAMVWRLGRTARKSS*WLGQTRLTFPIVRIRPLRLKRSLIL 1061 TLTPLWSFTGLIREIVTLISS*LTLNRPAALK*SIFLRSAPLTFILVSSPKG*SVYLPHHPLTAILGNSP*LAAMVW+LGRTARKSS*WLGQTRLTFPIVRIRPLRLKRSLIL Subject 778 TLTPLWSFTGLIREIVTLISS*LTLNRPAALK*SIFLRSAPLTFILVSSPKG*SVYLPHHPLTAILGNSP*LAAMVWQLGRTARKSS*WLGQTRLTFPIVRIRPLRLKRSLIL 1116
Range 8: 111 to 377 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
217.3 bits(468) | 0.0 | 88/89(99%) | 0/89(0%) | Plus/Minus |
Query 1437 WKNEEHEKTKIENALCL*LGKLNTKVRTKNKNPKTHYTYLKENLTRRYSTQRKKNFLFF*LIRKNKHG*TKHDWKKIFFGF*NIGKTVT 1703 WKNEEHEKTKIENALCL*LGKLNTK+RTKNKNPKTHYTYLKENLTRRYSTQRKKNFLFF*LIRKNKHG*TKHDWKKIFFGF*NIGKTVT Subject 111 WKNEEHEKTKIENALCL*LGKLNTKIRTKNKNPKTHYTYLKENLTRRYSTQRKKNFLFF*LIRKNKHG*TKHDWKKIFFGF*NIGKTVT 377
Range 9: 9661 to 9831 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
138.5 bits(296) | 0.0 | 57/57(100%) | 0/57(0%) | Minus/Plus |
Query 3 FGG*RKCLGLAP*LPCKSHMLIA*AHLGVCPRVASVRCPAASSKGR*KCWALQV*WG 173 FGG*RKCLGLAP*LPCKSHMLIA*AHLGVCPRVASVRCPAASSKGR*KCWALQV*WG Subject 9661 FGG*RKCLGLAP*LPCKSHMLIA*AHLGVCPRVASVRCPAASSKGR*KCWALQV*WG 9831
Range 10: 9106 to 9288 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
138.1 bits(295) | 0.0 | 59/61(97%) | 0/61(0%) | Minus/Plus |
Query 546 ILPGVYRTINHESLCYGLLGEPSVRLIPVAILL*F*VSIFSSTRAICEGNTSGTSYSRLII 728 ++PGVYRTINHESLCYGLLGEPSVRLIPVAILL*F*VSIFSSTRAICEGNTSGTSYSRLII Subject 9106 LIPGVYRTINHESLCYGLLGEPSVRLIPVAILL*F*VSIFSSTRAICEGNTSGTSYSRLII 9288
Range 11: 558 to 638 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
70.7 bits(148) | 0.0 | 26/27(96%) | 0/27(0%) | Minus/Plus |
Query 1176 WCW*YFYPFLKVSTFSSNFI*GRVCKT 1256 WCW*YF+PFLKVSTFSSNFI*GRVCKT Subject 558 WCW*YFFPFLKVSTFSSNFI*GRVCKT 638
Range 12: 614 to 724 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
68.0 bits(142) | 0.0 | 37/37(100%) | 0/37(0%) | Minus/Plus |
Query 1090 YLGSCL*NLFPYFLAXXXXXXXX*CGPICLPFLRLSF 1200 YLGSCL*NLFPYFLAISFSSIFI*CGPICLPFLRLSF Subject 614 YLGSCL*NLFPYFLAISFSSIFI*CGPICLPFLRLSF 724
Range 13: 503 to 532 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
24.9 bits(48) | 0.0 | 10/10(100%) | 0/10(0%) | Minus/Plus |
Query 1282 NISFLFLKIT 1311 NISFLFLKIT Subject 503 NISFLFLKIT 532
Range 14: 9111 to 9623 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
401.1 bits(869) | 0.0 | 171/171(100%) | 0/171(0%) | Plus/Minus |
Query 211 NVRPTNMYTNRTQHFQRSKRAGCWPPVGP*PTLTLREKSQHMVCYHNSANRPKDIGENFSPSMHRRK*EGYPKRKNSLLYKSSRY*PHGLD*TKKYIDAKKGKNYEKT*LQKIIRRE*EVPLVLPSQMARVEEKIET*N*RRIATGINLTDGSPRRP*QRDS*FIVR*TPG 723 NVRPTNMYTNRTQHFQRSKRAGCWPPVGP*PTLTLREKSQHMVCYHNSANRPKDIGENFSPSMHRRK*EGYPKRKNSLLYKSSRY*PHGLD*TKKYIDAKKGKNYEKT*LQKIIRRE*EVPLVLPSQMARVEEKIET*N*RRIATGINLTDGSPRRP*QRDS*FIVR*TPG Subject 9111 NVRPTNMYTNRTQHFQRSKRAGCWPPVGP*PTLTLREKSQHMVCYHNSANRPKDIGENFSPSMHRRK*EGYPKRKNSLLYKSSRY*PHGLD*TKKYIDAKKGKNYEKT*LQKIIRRE*EVPLVLPSQMARVEEKIET*N*RRIATGINLTDGSPRRP*QRDS*FIVR*TPG 9623
Range 15: 749 to 1114 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
270.0 bits(583) | 0.0 | 121/122(99%) | 0/122(0%) | Plus/Minus |
Query 725 E*ETASNVTA*FVLSETSDEFDLATNLTFSPSALTATPLPLTKANCLV*PLTGDGANTRFTPWVSLPI*T*AAHFGEKSTTLAPPAGLRLTMNLLTSLFPLLNR*NSKVELT*GKEN*RKTQ 1090 E*ETASNVTA*FVLSETSDEFDLATNLTFSPSALTATPLPLTKANCLV*PLTGDGANTRFTPWVSLPI*T*AAHFGEKSTTLAPPAGLRLTMNLLTSLFPLLNR*NSKVELT*GKEN*RKT+ Subject 749 E*ETASNVTA*FVLSETSDEFDLATNLTFSPSALTATPLPLTKANCLV*PLTGDGANTRFTPWVSLPI*T*AAHFGEKSTTLAPPAGLRLTMNLLTSLFPLLNR*NSKVELT*GKEN*RKTR 1114
Range 16: 50 to 337 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
203.1 bits(437) | 0.0 | 90/96(94%) | 0/96(0%) | Plus/Minus |
Query 1477 RYAYN*EN*IRKYVRKIKTQKHTILT*RKT*HDATPHKGRKIFCFSD**GKINTAKQNTTGRKYFLVFKI*ERQ*LNPKTTQIERKKMQRTQTHPT 1764 RYAYN*EN*IRKYVRKIKTQKHTILT*RKT*HDATPHKGRKIFCFSD**GKINTAKQNTTGRKYFLVFKI*ERQ*LNPKTTQIERKK+Q T+ T Subject 50 RYAYN*EN*IRKYVRKIKTQKHTILT*RKT*HDATPHKGRKIFCFSD**GKINTAKQNTTGRKYFLVFKI*ERQ*LNPKTTQIERKKVQGTRRKGT 337
Range 17: 9660 to 9830 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
153.2 bits(328) | 0.0 | 57/57(100%) | 0/57(0%) | Plus/Minus |
Query 4 PHYTCRAQHFQRPFELAAGHLTEATLGQTPKCAHAISMCDLHGSYGAKPKHFRHPPK 174 PHYTCRAQHFQRPFELAAGHLTEATLGQTPKCAHAISMCDLHGSYGAKPKHFRHPPK Subject 9660 PHYTCRAQHFQRPFELAAGHLTEATLGQTPKCAHAISMCDLHGSYGAKPKHFRHPPK 9830
Range 18: 462 to 638 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.0 bits(214) | 0.0 | 58/59(98%) | 0/59(0%) | Plus/Minus |
Query 1176 GFTNTTLNKVRRESADFKKRIEILPTPQXXXXXXXXXXXXXGRIYYQYQFKIKRQTRI* 1352 GFTNTTLNKVRRESADFKKR EILPTPQKKKREKKKLSSRKGRIYYQYQFKIKRQTRI* Subject 462 GFTNTTLNKVRRESADFKKRKEILPTPQKKKREKKKLSSRKGRIYYQYQFKIKRQTRI* 638
Range 19: 678 to 725 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
36.3 bits(73) | 0.0 | 16/16(100%) | 0/16(0%) | Plus/Minus |
Query 1089 KN*DEGKVSK*DHTK* 1136 KN*DEGKVSK*DHTK* Subject 678 KN*DEGKVSK*DHTK* 725
Range 20: 9494 to 9829 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
272.8 bits(589) | 0.0 | 112/112(100%) | 0/112(0%) | Plus/Minus |
Query 5 PTIPAEPSTFSALLSWLLDT*PRLP*GKRPNALTQSACATYMVATVLNLNTSVIPQRLARLYCCTRPKQMFGQLTCTRTEPNTSSALKEQAVGHLLDPNLP*RYEKSHNTWC 340 PTIPAEPSTFSALLSWLLDT*PRLP*GKRPNALTQSACATYMVATVLNLNTSVIPQRLARLYCCTRPKQMFGQLTCTRTEPNTSSALKEQAVGHLLDPNLP*RYEKSHNTWC Subject 9494 PTIPAEPSTFSALLSWLLDT*PRLP*GKRPNALTQSACATYMVATVLNLNTSVIPQRLARLYCCTRPKQMFGQLTCTRTEPNTSSALKEQAVGHLLDPNLP*RYEKSHNTWC 9829
Range 21: 9112 to 9453 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
268.2 bits(579) | 0.0 | 114/114(100%) | 0/114(0%) | Plus/Minus |
Query 381 KFLPIYAPTKVGRVPQKKKLSTVQVKPVLTSRTRLNEKIHRRQERKELRKDLATKNNKTRIRSATGIALTDGTRRREN*NLKLKKDRHWY*PHRWLA*KTVTKGFMIYSTINTR 722 KFLPIYAPTKVGRVPQKKKLSTVQVKPVLTSRTRLNEKIHRRQERKELRKDLATKNNKTRIRSATGIALTDGTRRREN*NLKLKKDRHWY*PHRWLA*KTVTKGFMIYSTINTR Subject 9112 KFLPIYAPTKVGRVPQKKKLSTVQVKPVLTSRTRLNEKIHRRQERKELRKDLATKNNKTRIRSATGIALTDGTRRREN*NLKLKKDRHWY*PHRWLA*KTVTKGFMIYSTINTR 9453
Range 22: 751 to 981 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
172.9 bits(371) | 0.0 | 77/77(100%) | 0/77(0%) | Plus/Minus |
Query 858 IA*YSR*RVMGQIHASPLG*AYQYKRKRRTSEKNRLL*RRRPV*G*L*TY*RHYFPY*TGKTPKWS*REERRTDAKH 1088 IA*YSR*RVMGQIHASPLG*AYQYKRKRRTSEKNRLL*RRRPV*G*L*TY*RHYFPY*TGKTPKWS*REERRTDAKH Subject 751 IA*YSR*RVMGQIHASPLG*AYQYKRKRRTSEKNRLL*RRRPV*G*L*TY*RHYFPY*TGKTPKWS*REERRTDAKH 981
Range 23: 106 to 276 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
135.8 bits(290) | 0.0 | 57/57(100%) | 0/57(0%) | Plus/Minus |
Query 1538 NTLYLLEGKLNTTLLHTKEEKFFVFLTNKEK*TRLNKTRLEENIFWFLKYRKDSN*T 1708 NTLYLLEGKLNTTLLHTKEEKFFVFLTNKEK*TRLNKTRLEENIFWFLKYRKDSN*T Subject 106 NTLYLLEGKLNTTLLHTKEEKFFVFLTNKEK*TRLNKTRLEENIFWFLKYRKDSN*T 276
Range 24: 448 to 531 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
64.3 bits(134) | 0.0 | 28/28(100%) | 0/28(0%) | Plus/Minus |
Query 1283 VIFKKRKDILPIPIQN*KTNTNLT*IEG 1366 VIFKKRKDILPIPIQN*KTNTNLT*IEG Subject 448 VIFKKRKDILPIPIQN*KTNTNLT*IEG 531
Range 25: 1060 to 1137 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.7 bits(100) | 0.0 | 20/26(77%) | 0/26(0%) | Plus/Minus |
Query 702 YSTINTRENERPLQT*RPDSYYRKRQ 779 Y+ ENERPLQT*RPDSYYRKRQ Subject 1060 YNNGRRGENERPLQT*RPDSYYRKRQ 1137
Range 26: 589 to 639 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
41.4 bits(84) | 0.0 | 17/17(100%) | 0/17(0%) | Plus/Minus |
Query 1175 RFYKHDPK*S*KRKC*L 1225 RFYKHDPK*S*KRKC*L Subject 589 RFYKHDPK*S*KRKC*L 639
Range 27: 685 to 723 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
35.0 bits(70) | 0.0 | 13/13(100%) | 0/13(0%) | Plus/Minus |
Query 1091 KLRRRKGKQIGPH 1129 KLRRRKGKQIGPH Subject 685 KLRRRKGKQIGPH 723
Range 28: 9345 to 9740 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
303.0 bits(655) | 0.0 | 132/132(100%) | 0/132(0%) | Minus/Plus |
Query 94 RLV*SVRLIPA*LVQ*RVFSFGVPFLLSSVHRWGEIFSYIFGTIGAIMIAHHVL*LFS*RQGRLGSNRWPTACSFRALEVLGSVRVHVSWPNICLGRVQQ*SLASLWGMTEVFRFSTVATM*VAHADCVSAF 489 RLV*SVRLIPA*LVQ*RVFSFGVPFLLSSVHRWGEIFSYIFGTIGAIMIAHHVL*LFS*RQGRLGSNRWPTACSFRALEVLGSVRVHVSWPNICLGRVQQ*SLASLWGMTEVFRFSTVATM*VAHADCVSAF Subject 9345 RLV*SVRLIPA*LVQ*RVFSFGVPFLLSSVHRWGEIFSYIFGTIGAIMIAHHVL*LFS*RQGRLGSNRWPTACSFRALEVLGSVRVHVSWPNICLGRVQQ*SLASLWGMTEVFRFSTVATM*VAHADCVSAF 9740
Range 29: 753 to 1142 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
288.8 bits(624) | 0.0 | 123/130(95%) | 0/130(0%) | Minus/Plus |
Query 697 VLRQFSFPHVNSTLEFYRFNKGNSDVNKFIVNLKPAGGAKVVDFSPKCAAYVYIGKLTQGVKRVFAPSPVNGYTRQFALVSGNGVAVRADGEKVKLVARSNSSDVSDSTNQAVTFEAVSHSPGCLSYYKS 1086 VLRQFSFPHVNSTLEFYRFNKGNSDVNKFIVNLKPAGGAKVVDFSPKCAAYVYIGKLTQGVKRVFAPSPVNGYTRQFALVSGNGVAVRADGEKVKLVARSNSSDVSDSTNQAVTFEAVSHS + YY++ Subject 753 VLRQFSFPHVNSTLEFYRFNKGNSDVNKFIVNLKPAGGAKVVDFSPKCAAYVYIGKLTQGVKRVFAPSPVNGYTRQFALVSGNGVAVRADGEKVKLVARSNSSDVSDSTNQAVTFEAVSHSLLVVHYYRT 1142
Range 30: 68 to 214 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
115.6 bits(246) | 0.0 | 48/49(98%) | 0/49(0%) | Minus/Plus |
Query 1600 SLHLFSFYLGCFWV*LLSFLYFKNQKIFSSSRVLFSRVYFSLLVRKTKN 1746 +LHLFSFYLGCFWV*LLSFLYFKNQKIFSSSRVLFSRVYFSLLVRKTKN Subject 68 TLHLFSFYLGCFWV*LLSFLYFKNQKIFSSSRVLFSRVYFSLLVRKTKN 214
Range 31: 9716 to 9832 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
94.1 bits(199) | 0.0 | 39/39(100%) | 0/39(0%) | Minus/Plus |
Query 2 TC*LRERIWAFALG*PRLGVQQPAQKGAESAGLCRYSGV 118 TC*LRERIWAFALG*PRLGVQQPAQKGAESAGLCRYSGV Subject 9716 TC*LRERIWAFALG*PRLGVQQPAQKGAESAGLCRYSGV 9832
Range 32: 9113 to 9244 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
61.6 bits(128) | 0.0 | 44/44(100%) | 0/44(0%) | Minus/Plus |
Query 590 RVFIVL*IMNPFVTVF*ASHL*G*YQWXXXXXXXXXXXXXRVPS 721 RVFIVL*IMNPFVTVF*ASHL*G*YQWRSFFSFRFQFSLLRVPS Subject 9113 RVFIVL*IMNPFVTVF*ASHL*G*YQWRSFFSFRFQFSLLRVPS 9244
Range 33: 272 to 337 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
50.1 bits(103) | 0.0 | 21/22(95%) | 0/22(0%) | Minus/Plus |
Query 1477 VFLGFYFSYVLSYLVFLVISIA 1542 VFLGFYFSYV SYLVFLVISIA Subject 272 VFLGFYFSYVFSYLVFLVISIA 337
Range 34: 398 to 457 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.7 bits(100) | 0.0 | 20/20(100%) | 0/20(0%) | Minus/Plus |
Query 1357 W*VAF*CFYLSLIVLGFPSI 1416 W*VAF*CFYLSLIVLGFPSI Subject 398 W*VAF*CFYLSLIVLGFPSI 457
Range 35: 460 to 567 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
31.8 bits(63) | 0.0 | 36/36(100%) | 0/36(0%) | Minus/Plus |
Query 1247 S*IRVCXXXXXXXXXXXLPFLEDNXXXXXXXFCGVG 1354 S*IRVCLLILNWYW*YILPFLEDNFFFSRFFFCGVG Subject 460 S*IRVCLLILNWYW*YILPFLEDNFFFSRFFFCGVG 567
Range 36: 319 to 348 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
27.2 bits(53) | 0.0 | 10/10(100%) | 0/10(0%) | Minus/Plus |
Query 1466 PSYKHSAFSI 1495 PSYKHSAFSI Subject 319 PSYKHSAFSI 348
Range 37: 9325 to 9624 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
240.3 bits(518) | 0.0 | 100/100(100%) | 0/100(0%) | Minus/Plus |
Query 210 LASMYFFV*SSP*G*YRLDLYSREFFLLGYPSYFRRCIDGEKFSPISLGRLALL**HTMCCDFSRSVRVG*GPTGGQQPALLERWKCWVRFVYMLVGRTF 509 LASMYFFV*SSP*G*YRLDLYSREFFLLGYPSYFRRCIDGEKFSPISLGRLALL**HTMCCDFSRSVRVG*GPTGGQQPALLERWKCWVRFVYMLVGRTF Subject 9325 LASMYFFV*SSP*G*YRLDLYSREFFLLGYPSYFRRCIDGEKFSPISLGRLALL**HTMCCDFSRSVRVG*GPTGGQQPALLERWKCWVRFVYMLVGRTF 9624
Range 38: 911 to 1117 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
136.7 bits(292) | 0.0 | 68/69(99%) | 0/69(0%) | Minus/Plus |
Query 722 YW*AHPRGEACICPITR*RLY*AIRLS*RQWCXXXXXXRESQVSG*VKLV*RFR*YESGRYV*SGLSFS 928 YW*AHPRGEACICPITR*RLY*AIRLS*RQWCG *GGRRESQVSG*VKLV*RFR*YESGRYV*SGLSFS Subject 911 YW*AHPRGEACICPITR*RLY*AIRLS*RQWCGS*GGRRESQVSG*VKLV*RFR*YESGRYV*SGLSFS 1117
Range 39: 157 to 243 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
71.6 bits(150) | 0.0 | 29/29(100%) | 0/29(0%) | Minus/Plus |
Query 1571 QSCFV*PCLFFLISQKNKKFFFLCVE*RR 1657 QSCFV*PCLFFLISQKNKKFFFLCVE*RR Subject 157 QSCFV*PCLFFLISQKNKKFFFLCVE*RR 243
Range 40: 752 to 859 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
71.6 bits(150) | 0.0 | 36/36(100%) | 0/36(0%) | Minus/Plus |
Query 980 CFASVLLSSR*LHFGVLPV**GK**R**VHS*P*TG 1087 CFASVLLSSR*LHFGVLPV**GK**R**VHS*P*TG Subject 752 CFASVLLSSR*LHFGVLPV**GK**R**VHS*P*TG 859
Range 41: 9789 to 9830 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
32.7 bits(65) | 0.0 | 14/14(100%) | 0/14(0%) | Minus/Plus |
Query 4 KRALKVLGSAGIVG 45 KRALKVLGSAGIVG Subject 9789 KRALKVLGSAGIVG 9830
Range 42: 493 to 549 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
28.1 bits(55) | 0.0 | 10/19(53%) | 0/19(0%) | Minus/Plus |
Query 1200 WCW*YFYPFLKVSTFSSNF 1256 W W*Y PFL+ + F S F Subject 493 WYW*YILPFLEDNFFFSRF 549
Range 43: 9221 to 9274 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
27.2 bits(53) | 0.0 | 11/18(61%) | 0/18(0%) | Minus/Plus |
Query 630 YGLLGEPSVRLIPVAILL 683 + LL PSVR IPVA+L+ Subject 9221 FSLLRVPSVRAIPVALLI 9274
Range 44: 9045 to 9266 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
129.4 bits(276) | 0.0 | 54/74(73%) | 0/74(0%) | Minus/Plus |
Query 568 SNSSDVSDSTNQAVTFEAVSHSPGCLSYYKS*IPLLRSSRRAICEVNTSGDPSLVLGFNFLFYACHL*GQYQWH 789 + +VS T+ + GCLSYYKS*IPLLRSSRRAICEVNTSGDPSLVLGFNFLFYACHL*GQYQWH Subject 9045 AEGGEVSCLTSVFCALNTREANTGCLSYYKS*IPLLRSSRRAICEVNTSGDPSLVLGFNFLFYACHL*GQYQWH 9266
Range 45: 447 to 653 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.5 bits(106) | 0.0 | 30/69(43%) | 0/69(0%) | Plus/Minus |
Query 1096 KTKER*ANRTTLNKNRRERNS*KIRKKVLQTRP*IKLEEKVLTLRKG*KYYQHHKRKNEKRRSYLQEKE 1302 K KE+ TTLNK RRE K RK++L T K E+K L+ RKG YYQ+ + + R L+ KE Subject 447 KNKEKGFTNTTLNKVRRESADFKKRKEILPTPQKKKREKKKLSSRKGRIYYQYQFKIKRQTRI*LK*KE 653
Grapevine leafroll associated virus 3 isolate TC BR, complete genome
Sequence ID: KX756668.1 Length: 18498 Number of Matches: 39
Range 1: 756 to 1139 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
168.3 bits(361) | 0.0 | 69/128(54%) | 0/128(0%) | Minus/Plus |
Query 700 LRQFSFPHVNSTLEFYRFNKGNSDVNKFIVNLKPAGGAKVVDFSPKCAAYVYIGKLTQGVKRVFAPSPVNGYTRQFALVSGNGVAVRADGEKVKLVARSNSSDVSDSTNQAVTFEAVSHSPGCLSYYK 1083 LR FSFPHVN+TLE+ R+NK NSDV F+ +K G K+ DF+PK AA +YIGKLT+GVKR FAP PV G+ RQ+A+VSG +R DG+KV + AR+++S VSD+++ V FEAV+H+ + Y++ Subject 756 LRVFSFPHVNNTLEYIRYNKANSDVGAFLTAMKFTGNVKLSDFTPKSAALIYIGKLTKGVKRTFAPPPVKGFARQYAVVSGTVSVLRGDGKKVLMEARTSTSAVSDASSYDVVFEAVTHALIVVHYHR 1139
Range 2: 9313 to 9501 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
71.6 bits(150) | 0.0 | 31/63(49%) | 0/63(0%) | Minus/Plus |
Query 243 LLGYPSYFRRCIDGEKFSPISLGRLALL**HTMCCDFSRSVRVG*GPTGGQQPALLERWKCWV 431 +LGYPSY R ++P+S G+ * C DF V+VG GPTG QQPAL RWKCW+ Subject 9313 VLGYPSYSCRSAYAGVYTPVSYGQETHQL*RARCRDF*PCVKVGWGPTGDQQPALKVRWKCWI 9501
Range 3: 9476 to 9622 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
57.9 bits(120) | 0.0 | 29/49(59%) | 0/49(0%) | Minus/Plus |
Query 112 LEVLGSVRVHVSWPNICLGRVQQ*SLASLWGMTEVFRFSTVATM*VAHA 258 L+ GSV +S PNI LG VQ SL LWGMT RF TVA M*V HA Subject 9476 LKCAGSVGFGLSVPNILLGDVQVFSLVCLWGMTGATRFRTVAAM*VVHA 9622
Range 4: 9646 to 9732 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.9 bits(83) | 0.0 | 19/29(66%) | 0/29(0%) | Minus/Plus |
Query 12 HLGVCPRVASVRCPAASSKGR*KCWALQV 98 HLG PR ASVRC AA S R*KC L+V Subject 9646 HLGGSPRAASVRCLAAGSTER*KC*VLKV 9732
Range 5: 78 to 173 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
30.4 bits(60) | 0.0 | 15/32(47%) | 0/32(0%) | Minus/Plus |
Query 1639 FSFYLGCFWV*LLSFLYFKNQKIFSSSRVLFS 1734 F FY CFWV LSF K + F S V+ S Subject 78 FVFYFSCFWVLRLSFS*TKTKVNFFFSAVVSS 173
Range 6: 9123 to 9203 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
29.0 bits(57) | 0.0 | 15/27(56%) | 0/27(0%) | Minus/Plus |
Query 631 SYYKS*IPLLRSSRRAICEVNTSGDPS 711 SY L S RRAI EVNT G PS Subject 9123 SYLSQSSSLSSSLRRAIREVNTGGTPS 9203
Range 7: 9245 to 9307 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
25.8 bits(50) | 0.0 | 12/21(57%) | 0/21(0%) | Minus/Plus |
Query 432 FFV*SSP*G*YRLDLYSREFF 494 F V +P*G* R ++YSR FF Subject 9245 FLVLFTP*G*DRWNMYSRAFF 9307
Range 8: 758 to 1105 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
98.7 bits(209) | 0.0 | 58/116(50%) | 0/116(0%) | Plus/Minus |
Query 734 TASNVTA*FVLSETSDEFDLATNLTFSPSALTATPLPLTKANCLV*PLTGDGANTRFTPWVSLPI*T*AAHFGEKSTTLAPPAGLRLTMNLLTSLFPLLNR*NSKVELT*GKEN*R 1081 TASN T+* SET++ LA+ TF PS L +PLT A C PLTG GAN RFTP VSLPI AA G KS P TSL LL SKV LT*GKE R Subject 758 TASNTTS*LDASETAEVEVLASIKTFLPSPLNTLTVPLTTAYCRANPLTGGGANVRFTPLVSLPIYMRAALLGVKSDNFTFPVNFMAVRKAPTSLLALLYLMYSKVLLT*GKEKTR 1105
Range 9: 9487 to 9624 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
59.7 bits(124) | 0.0 | 26/46(57%) | 0/46(0%) | Plus/Minus |
Query 110 SACATYMVATVLNLNTSVIPQRLARLYCCTRPKQMFGQLTCTRTEP 247 +AC TYM ATVLNL VIPQR +L CT PK++FG L T P Subject 9487 AACTTYMAATVLNLVAPVIPQRHTKLNTCTSPKRIFGTLRPNPTLP 9624
Range 10: 9366 to 9506 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
57.9 bits(120) | 0.0 | 24/47(51%) | 0/47(0%) | Plus/Minus |
Query 238 NRTQHFQRSKRAGCWPPVGP*PTLTLREKSQHMVCYHNSANRPKDIG 378 ++ QHFQR+ AGCW PVGP PTLT KS+H+ Y + P D G Subject 9366 DQIQHFQRTLSAGCWSPVGPHPTLTQG*KSRHLARYS*CVSCP*DTG 9506
Range 11: 9629 to 9739 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
55.1 bits(114) | 0.0 | 26/37(70%) | 0/37(0%) | Plus/Minus |
Query 5 PTIPAEPSTFSALLSWLLDT*PRLP*GKRPNALTQSA 115 PT+P+ PSTFSA S LLDT*P LP*G RPNA T A Subject 9629 PTVPSGPSTFSAP*SRLLDT*PMLP*GFRPNACTSYA 9739
Range 12: 9147 to 9203 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
36.3 bits(73) | 0.0 | 15/19(79%) | 0/19(0%) | Plus/Minus |
Query 631 RRIATGINLTDGSPRRP*Q 687 RR ATGINLTDG+P+R *Q Subject 9147 RRSATGINLTDGTPKRR*Q 9203
Range 13: 118 to 255 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
31.8 bits(63) | 0.0 | 17/46(37%) | 0/46(0%) | Plus/Minus |
Query 1494 GKLNTKVRTKNKNPKTHYTYLKENLTRRYSTQRKKNFLFF*LIRKN 1631 GKL R K + + KEN R Y Q K+ L L RKN Subject 118 GKLKMTRRDVLKGEEIFFVIFKENYNRNY*QQLKRKNLLLFLFRKN 255
Range 14: 9246 to 9305 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
31.3 bits(62) | 0.0 | 12/20(60%) | 0/20(0%) | Plus/Minus |
Query 434 KTLYCTSQAGINLTD*TKRK 493 KTLYCT G++LT *TK++ Subject 9246 KTLYCTCSTGLSLTV*TKQE 9305
Range 15: 255 to 350 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
26.7 bits(52) | 0.0 | 13/32(41%) | 0/32(0%) | Plus/Minus |
Query 1273 KRRSYLQEKEGYITNTNSKLKDKHEFNLNRRK 1368 KR + L+ G N+K + K + NLNRRK Subject 255 KRTNPLKRHLGKTKTKNTKTQRKLDANLNRRK 350
Range 16: 9317 to 9355 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
25.4 bits(49) | 0.0 | 8/13(62%) | 0/13(0%) | Plus/Minus |
Query 389 PHLCTDESRKGTP 427 PH+ +D+SRKG P Subject 9317 PHMRSDKSRKGNP 9355
Range 17: 9400 to 9504 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
49.2 bits(101) | 0.0 | 21/35(60%) | 0/35(0%) | Plus/Minus |
Query 240 PNPTLPAL*KSRLLATCWTLTYPDATRKVTTHGVL 344 PNPTLPA K RLL TCW +Y D KV T G L Subject 9400 PNPTLPAHFKCRLLVTCWPPSYLDTRLKVATPGAL 9504
Range 18: 9633 to 9740 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.7 bits(100) | 0.0 | 20/36(56%) | 0/36(0%) | Plus/Minus |
Query 4 PHYTCRAQHFQRPFELAAGHLTEATLGQTPKCAHAI 111 P+ T R HFQR E AA HLT+A LG PKC H + Subject 9633 PNCTFRT*HFQRSVEPAARHLTDAALGLPPKCMHVL 9740
Range 19: 9528 to 9620 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.3 bits(99) | 0.0 | 21/31(68%) | 0/31(0%) | Plus/Minus |
Query 114 HVRLTW*LRC*T*TLPSSPKDSLDSTAVHDL 206 H RLTW L+ *T*+LPSSPKD+L+ T VH L Subject 9528 HARLTWQLQS*T*SLPSSPKDTLN*TPVHHL 9620
Range 20: 9133 to 9201 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
34.1 bits(68) | 0.0 | 12/23(52%) | 0/23(0%) | Plus/Minus |
Query 563 KKCHWYCPHRWHA*KRKLKPKTK 631 K+CH Y PH WHA*++ KT+ Subject 9133 KECHRY*PHGWHA*EKMTNWKTE 9201
Range 21: 9244 to 9309 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
30.4 bits(60) | 0.0 | 12/22(55%) | 0/22(0%) | Plus/Minus |
Query 430 RKNSLLYKSSRY*PHGLD*TKK 495 +KN+LLY R *PHG++ T+K Subject 9244 KKNALLYMFHRS*PHGVNKTRK 9309
Range 22: 9307 to 9351 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
23.5 bits(45) | 0.0 | 10/15(67%) | 0/15(0%) | Plus/Minus |
Query 393 IYAPTKVGRVPQKKK 437 I APT+VGRV Q K Subject 9307 ICAPTRVGRVTQDLK 9351
Range 23: 9308 to 9505 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
60.6 bits(126) | 0.0 | 35/66(53%) | 0/66(0%) | Minus/Plus |
Query 239 FFFWGTLPTFVGA*MGRNFLLYLWDDWRYYDSTPCVVTFLVASG*VRVQQVANSLLF*SAGSVGFG 436 F W TLPT VGA M LLYL D S P V TF + S * QQV NSL AGSVGFG Subject 9308 FKSWVTLPTLVGAHMREFILLYLTDKRHISYSAPGVATFSLVSR*DGGQQVTNSLHLKCAGSVGFG 9505
Range 24: 898 to 1005 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
42.8 bits(87) | 0.0 | 20/36(56%) | 0/36(0%) | Minus/Plus |
Query 834 PLTFILVSSPKG*SVYLPHHPLTAILGNSP*LAAMV 941 PL++ILVSSPKG*S P H L + GN+P AA + Subject 898 PLSYILVSSPKG*SGRSPPHQLKGLRGNTPL*AAQL 1005
Range 25: 9629 to 9742 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
39.6 bits(80) | 0.0 | 22/38(58%) | 0/38(0%) | Minus/Plus |
Query 2 C*LRERIWAFALG*PRLGVQQPAQKGAESAGLCRYSGV 115 C R IWA ALG R GV QPA + AESA RYS V Subject 9629 CVRRACIWAEALGQHRSGV*QPALRSAESARS*RYSWV 9742
Range 26: 9106 to 9204 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
38.6 bits(78) | 0.0 | 18/33(55%) | 0/33(0%) | Minus/Plus |
Query 630 ILPGVYRTINHESLCYGLLGEPSVRLIPVAILL 728 ++P RT +C+ LLG PSVRLIPVA+LL Subject 9106 LIPKGRRTYLSLPVCHLLLGVPSVRLIPVALLL 9204
Range 27: 9561 to 9620 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
32.7 bits(65) | 0.0 | 15/20(75%) | 0/20(0%) | Minus/Plus |
Query 114 FGG*RKCLGLAP*LPCKSHM 173 FGG*R+ LGL *LPCKS M Subject 9561 FGG*RERLGLGL*LPCKSCM 9620
Range 28: 9514 to 9576 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
31.8 bits(63) | 0.0 | 13/21(62%) | 0/21(0%) | Minus/Plus |
Query 158 AEHLFRSCTAVESSESLGDDG 220 A++ FR CT V+ S SLGDDG Subject 9514 AKYPFR*CTGVQFSVSLGDDG 9576
Range 29: 4653 to 4736 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
25.4 bits(49) | 0.0 | 12/28(43%) | 0/28(0%) | Minus/Plus |
Query 706 SNSSDVSDSTNQAVTFEAVSHSPGCLSY 789 +N DV STN V E +HSP + Y Subject 4653 TNVRDVGISTNGEVVGEEETHSPRSVLY 4736
Range 30: 9407 to 9508 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.7 bits(100) | 0.0 | 22/34(65%) | 0/34(0%) | Plus/Minus |
Query 236 RTEPNTSSALKEQAVGHLLDPNLP*RYEKSHNTW 337 +T+ NTSSAL QAVGHLL P LP* KS +TW Subject 9407 KTKSNTSSAL*VQAVGHLLAPILP*HKAKSRDTW 9508
Range 31: 9628 to 9741 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
46.9 bits(96) | 0.0 | 23/38(61%) | 0/38(0%) | Plus/Minus |
Query 3 TPLYLQSPALSAPF*AGCWTPNRGYPRANAQMRSRNQH 116 T LYLQ ALSA AGC TP+R PRA+AQM +R H Subject 9628 TQLYLQDLALSALRRAGC*TPDRCCPRASAQMHARLTH 9741
Range 32: 891 to 1115 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
46.9 bits(96) | 0.0 | 29/75(39%) | 0/75(0%) | Plus/Minus |
Query 724 RMRDRFKRNGLIRTIGNVRRV*PSH*LDFLAVRPNRHTIAAN*GELPSIAVNG*WGKYTLHPLGELTNINVSGAL 948 RM FK + + R +GN R P + L + AA+ G LP N G+ LHP GELTNI SG L Subject 891 RMCYSFKYDVVTRRVGNCRS*GPRLHQNLLTIPSQYTNCAAHNGVLPRKPFNWWGGERPLHPFGELTNIYESGTL 1115
Range 33: 9560 to 9619 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
38.6 bits(78) | 0.0 | 14/20(70%) | 0/20(0%) | Plus/Minus |
Query 115 MCDLHGSYGAKPKHFRHPPK 174 M DLHGSY KP RHPPK Subject 9560 MHDLHGSYSPKPSRSRHPPK 9619
Range 34: 9112 to 9216 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
30.4 bits(60) | 0.0 | 15/35(43%) | 0/35(0%) | Plus/Minus |
Query 618 NLKLKKDRHWY*PHRWLA*KTVTKGFMIYSTINTR 722 N KK+ H Y*PH W A*+ +T ST R Subject 9112 NTHFKKECHRY*PHGWHA*EKMTNWKTEISTTTLR 9216
Range 35: 9245 to 9334 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
29.9 bits(59) | 0.0 | 14/30(47%) | 0/30(0%) | Plus/Minus |
Query 405 TKVGRVPQKKKLSTVQVKPVLTSRTRLNEK 494 ++ G K+K STV V PVL SR N+K Subject 9245 SRKGNPGLKEKRSTVHVPPVLASRCEQNKK 9334
Range 36: 750 to 827 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
28.6 bits(56) | 0.0 | 12/26(46%) | 0/26(0%) | Plus/Minus |
Query 1012 VTISLIKPVKLQSGVNVRKGELTQNT 1089 + ISL+ P LQ +++RKGE Q T Subject 750 IAISLVVPNVLQGIIDMRKGENAQRT 827
Range 37: 9318 to 9506 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
55.6 bits(115) | 0.0 | 30/63(48%) | 0/63(0%) | Minus/Plus |
Query 238 GVPFLLSSVHRWGEIFSYIFGTIGAIMIAHHVL*LFS*RQGRLGSNRWPTACSFRALEVLGSV 426 G+PFLL S G ++S I T IA V L + QGR+G+NR PTAC+ ALEVL V Subject 9318 GLPFLLLSERICGSLYSCILRTRDTSAIARQVSRLLALCQGRMGANR*PTACT*SALEVLDLV 9506
Grapevine leafroll associated virus 3 isolate WA MR, complete genome
Sequence ID: GU983863.1 Length: 18498 Number of Matches: 36
Range 1: 756 to 1139 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
166.5 bits(357) | 0.0 | 68/128(53%) | 0/128(0%) | Minus/Plus |
Query 700 LRQFSFPHVNSTLEFYRFNKGNSDVNKFIVNLKPAGGAKVVDFSPKCAAYVYIGKLTQGVKRVFAPSPVNGYTRQFALVSGNGVAVRADGEKVKLVARSNSSDVSDSTNQAVTFEAVSHSPGCLSYYK 1083 LR FSFPHVN+TLE+ R+NK N DV F+ +K G K+ DF+PKCAA +YIGKLT+GVKR F P PV G+ RQ+A+VSG+ A+R DG+KV + AR+++S SD ++ V FEAVS++ + Y++ Subject 756 LRVFSFPHVNNTLEYVRYNKANGDVGAFLTTMKFTGNVKLSDFTPKCAAMIYIGKLTKGVKRTFVPPPVKGFARQYAVVSGSVSALRGDGKKVLMEARTSTSATSDVSDFDVVFEAVSNALLVVHYHR 1139
Range 2: 9313 to 9501 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
71.2 bits(149) | 0.0 | 32/63(51%) | 0/63(0%) | Minus/Plus |
Query 243 LLGYPSYFRRCIDGEKFSPISLGRLALL**HTMCCDFSRSVRVG*GPTGGQQPALLERWKCWV 431 +LGYPSY R + +P+S G+ * C DF V VG*GPTG QQPAL RWKCW+ Subject 9313 VLGYPSYSCRSVHVGV*TPVSYGQETHQL*RAKCRDF*PCVEVG*GPTGDQQPALKVRWKCWI 9501
Range 3: 9476 to 9622 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
59.3 bits(123) | 0.0 | 29/49(59%) | 0/49(0%) | Minus/Plus |
Query 112 LEVLGSVRVHVSWPNICLGRVQQ*SLASLWGMTEVFRFSTVATM*VAHA 258 L GSV +S PNI LG VQ+ SL LWGMT RF TVA M*V HA Subject 9476 LRCAGSVGFGLSVPNILLGDVQESSLVCLWGMTGATRFRTVAAM*VVHA 9622
Range 4: 9646 to 9732 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.0 bits(81) | 0.0 | 19/29(66%) | 0/29(0%) | Minus/Plus |
Query 12 HLGVCPRVASVRCPAASSKGR*KCWALQV 98 HLG CPR ASVR AA S R*KC L+V Subject 9646 HLGECPRAASVR*LAAGSTER*KC*VLKV 9732
Range 5: 9157 to 9204 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
31.3 bits(62) | 0.0 | 13/16(81%) | 0/16(0%) | Minus/Plus |
Query 630 LLGEPSVRLIPVAILL 677 LLG PSV+LIPVA+LL Subject 9157 LLGVPSVKLIPVALLL 9204
Range 6: 78 to 173 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
25.8 bits(50) | 0.0 | 13/32(41%) | 0/32(0%) | Minus/Plus |
Query 1639 FSFYLGCFWV*LLSFLYFKNQKIFSSSRVLFS 1734 F FY CFWV +F K + F S V+ S Subject 78 FIFYFSCFWVLSFNFS*RKTK*KFFLSAVVSS 173
Range 7: 9248 to 9307 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
25.4 bits(49) | 0.0 | 12/20(60%) | 0/20(0%) | Minus/Plus |
Query 432 FV*SSP*G*YRLDLYSREFF 491 FV +P*G* R ++YSR FF Subject 9248 FVLFTP*G*DRWNMYSRGFF 9307
Range 8: 758 to 1108 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
95.9 bits(203) | 0.0 | 56/117(48%) | 0/117(0%) | Plus/Minus |
Query 731 ETASNVTA*FVLSETSDEFDLATNLTFSPSALTATPLPLTKANCLV*PLTGDGANTRFTPWVSLPI*T*AAHFGEKSTTLAPPAGLRLTMNLLTSLFPLLNR*NSKVELT*GKEN*R 1081 ETASN T+ SE ++ LA+ TF PS L+A PLT A C PLTG G N RFTP VS P+* AAH G KS P + TS LL SKV LT*GKE R Subject 758 ETASNTTSKSDTSEVAEVEVLASIKTFLPSPLSALTEPLTTAYCRANPLTGGGTNVRFTPLVSFPM*IIAAHLGVKSDNFTFPVNFMVVRKAPTSPLALLYLTYSKVLLT*GKEKTR 1108
Range 9: 9294 to 9506 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
64.8 bits(135) | 0.0 | 31/71(44%) | 0/71(0%) | Plus/Minus |
Query 238 NRTQHFQRSKRAGCWPPVGP*PTLTLREKSQHMVCYHNSANRPKDIGENFSPSMHRRK*EGYPKRKNSLLY 450 ++ QHFQR+ AGCW PVGP PT T KS+H+ Y + P D G R++*EG PK LY Subject 9294 DQIQHFQRTLSAGCWSPVGPYPTSTQG*KSRHLARYS*CVSCP*DTGVQTPTCTLRQE*EG*PKT*RKTLY 9506
Range 10: 9487 to 9624 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
57.4 bits(119) | 0.0 | 25/46(54%) | 0/46(0%) | Plus/Minus |
Query 110 SACATYMVATVLNLNTSVIPQRLARLYCCTRPKQMFGQLTCTRTEP 247 +AC TY+ ATVLNL VIPQR +L CT PK++FG L T P Subject 9487 AACTTYIAATVLNLVAPVIPQRHTKLDSCTSPKRIFGTLRPNPTLP 9624
Range 11: 9629 to 9739 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.9 bits(107) | 0.0 | 25/37(68%) | 0/37(0%) | Plus/Minus |
Query 5 PTIPAEPSTFSALLSWLLDT*PRLP*GKRPNALTQSA 115 PT+P+ PSTFSA S LL T*P LP*G RPNA T A Subject 9629 PTVPSGPSTFSAP*SRLLVT*PTLP*GTRPNACTSYA 9739
Range 12: 9156 to 9203 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
32.7 bits(65) | 0.0 | 12/16(75%) | 0/16(0%) | Plus/Minus |
Query 631 RRIATGINLTDGSPRR 678 RR ATGIN TDG+P+R Subject 9156 RRSATGINFTDGTPKR 9203
Range 13: 9246 to 9305 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
31.3 bits(62) | 0.0 | 13/20(65%) | 0/20(0%) | Plus/Minus |
Query 434 KTLYCTSQAGINLTD*TKRK 493 KTLYCT G+ LT *TK+K Subject 9246 KTLYCTCSTGLILTV*TKQK 9305
Range 14: 118 to 285 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
27.2 bits(53) | 0.0 | 16/56(29%) | 0/56(0%) | Plus/Minus |
Query 1464 KIENALCL*LGKLNTKVRTKNKNPKTHYTYLKENLTRRYSTQRKKNFLFF*LIRKN 1631 K C GKL T K ++ LKEN + Y Q K RK+ Subject 118 KRREKFCYFKGKLMTTKHETPIREKKNFVILKENYNKNY*RQLKGKIFILFFFRKS 285
Range 15: 9400 to 9504 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.9 bits(107) | 0.0 | 22/35(63%) | 0/35(0%) | Plus/Minus |
Query 240 PNPTLPAL*KSRLLATCWTLTYPDATRKVTTHGVL 344 PNPTLPA K RLL TCW L+Y D KV T G L Subject 9400 PNPTLPAHLKCRLLVTCWPLSYLDTRLKVATLGAL 9504
Range 16: 9633 to 9740 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.5 bits(106) | 0.0 | 20/36(56%) | 0/36(0%) | Plus/Minus |
Query 4 PHYTCRAQHFQRPFELAAGHLTEATLGQTPKCAHAI 111 P+ T R HFQR E AA HLT+A LG +PKC H + Subject 9633 PNCTFRT*HFQRSVEPAASHLTDAALGHSPKCMHVL 9740
Range 17: 9528 to 9620 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.9 bits(83) | 0.0 | 20/31(65%) | 0/31(0%) | Plus/Minus |
Query 114 HVRLTW*LRC*T*TLPSSPKDSLDSTAVHDL 206 H RLT L+ *T*+LPSSPKD+L+ T VH L Subject 9528 HARLT*QLQS*T*SLPSSPKDTLN*TPVHRL 9620
Range 18: 9144 to 9209 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
28.6 bits(56) | 0.0 | 13/22(59%) | 0/22(0%) | Plus/Minus |
Query 555 TRIRSATGIALTDGTRRREN*N 620 T RSATGI TDGT +R N Subject 9144 TSRRSATGINFTDGTPKRRRKN 9209
Range 19: 9308 to 9355 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
26.7 bits(52) | 0.0 | 9/16(56%) | 0/16(0%) | Plus/Minus |
Query 389 PHLCTDESRKGTPKEK 436 PH+ +D+SRKG P+ K Subject 9308 PHVRSDKSRKGNPRLK 9355
Range 20: 9247 to 9309 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
26.3 bits(51) | 0.0 | 11/21(52%) | 0/21(0%) | Plus/Minus |
Query 430 RKNSLLYKSSRY*PHGLD*TK 492 +KN LLY R PHG++ TK Subject 9247 KKNPLLYMFHRSYPHGVNKTK 9309
Range 21: 9407 to 9511 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
45.5 bits(93) | 0.0 | 21/35(60%) | 0/35(0%) | Plus/Minus |
Query 233 TRTEPNTSSALKEQAVGHLLDPNLP*RYEKSHNTW 337 T+T+ NTSSA QAVGHLL P LP KS +TW Subject 9407 TKTKSNTSSAP*VQAVGHLLAPILPRHKAKSRDTW 9511
Range 22: 9628 to 9735 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
41.8 bits(85) | 0.0 | 21/36(58%) | 0/36(0%) | Plus/Minus |
Query 9 LYLQSPALSAPF*AGCWTPNRGYPRANAQMRSRNQH 116 LYLQ ALSA AGC +P+R PRA AQM +R H Subject 9628 LYLQDLALSALRRAGC*SPDRRCPRALAQMHARLTH 9735
Range 23: 891 to 1112 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
41.8 bits(85) | 0.0 | 27/74(36%) | 0/74(0%) | Plus/Minus |
Query 727 MRDRFKRNGLIRTIGNVRRV*PSH*LDFLAVRPNRHTIAAN*GELPSIAVNG*WGKYTLHPLGELTNINVSGAL 948 +R+ F+ + IR +G+ P D L + R AA+ LP N K TLHP GEL+N+N S AL Subject 891 IRNSFEYDVEIRHVGSCGS*GPCLHQDLLTIPSQRAD*AADNSVLPCKPFNWWGDKRTLHPFGELSNVNHSCAL 1112
Range 24: 9560 to 9619 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
35.9 bits(72) | 0.0 | 13/20(65%) | 0/20(0%) | Plus/Minus |
Query 115 MCDLHGSYGAKPKHFRHPPK 174 M DLH SY KP RHPPK Subject 9560 MHDLHSSYSPKPSRSRHPPK 9619
Range 25: 681 to 827 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
32.7 bits(65) | 0.0 | 18/49(37%) | 0/49(0%) | Plus/Minus |
Query 1012 VTISLIKPVKLQSGVNVRKGELTQNTKTKTKER*ANRTTLNKNRRERNS 1158 +TI L+ P LQ +NVRKGE Q E * + N+N R + Subject 681 ITIGLVVPNVLQGVINVRKGENAQWANVVHSET*KLKRRGNRNNGLRRT 827
Range 26: 9245 to 9334 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
29.9 bits(59) | 0.0 | 14/30(47%) | 0/30(0%) | Plus/Minus |
Query 405 TKVGRVPQKKKLSTVQVKPVLTSRTRLNEK 494 ++ G K+K STV V PVL+SR N+K Subject 9245 SRKGNPRLKEKPSTVHVPPVLSSRCEQNKK 9334
Range 27: 9145 to 9201 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
28.1 bits(55) | 0.0 | 10/19(53%) | 0/19(0%) | Plus/Minus |
Query 563 KKCHWYCPHRWHA*KRKLK 619 K+CH Y H WHA*++ K Subject 9145 KECHRY*LHGWHA*EKTKK 9201
Range 28: 9308 to 9505 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
60.2 bits(125) | 0.0 | 35/66(53%) | 0/66(0%) | Minus/Plus |
Query 239 FFFWGTLPTFVGA*MGRNFLLYLWDDWRYYDSTPCVVTFLVASG*VRVQQVANSLLF*SAGSVGFG 436 F W TLPT VGA M L YL D S P V TF + S * R QQV NSL AGSVGFG Subject 9308 FKSWVTLPTLVGAYMWEFELPYLTDKRHISYSAPSVATFSLVSR*DRGQQVTNSLHLRCAGSVGFG 9505
Range 29: 9629 to 9736 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
35.9 bits(72) | 0.0 | 20/36(56%) | 0/36(0%) | Minus/Plus |
Query 8 C*LRERIWAFALG*PRLGVQQPAQKGAESAGLCRYS 115 C R IWA ALG R G QPA + AESA RYS Subject 9629 CVRRACIWASALGQRRSGD*QPALRSAESARS*RYS 9736
Range 30: 911 to 985 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
35.4 bits(71) | 0.0 | 14/25(56%) | 0/25(0%) | Minus/Plus |
Query 854 YW*AHPRGEACICPITR*RLY*AIR 928 +W AH RGEA +CP T *R+ A+R Subject 911 HWKAHQRGEAYVCPPTS*RVCTAVR 985
Range 31: 9514 to 9576 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
30.4 bits(60) | 0.0 | 13/21(62%) | 0/21(0%) | Minus/Plus |
Query 158 AEHLFRSCTAVESSESLGDDG 220 A++ FR CT V S SLGDDG Subject 9514 AKYPFRRCTGV*FSVSLGDDG 9576
Range 32: 4653 to 4736 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
28.6 bits(56) | 0.0 | 13/28(46%) | 0/28(0%) | Minus/Plus |
Query 706 SNSSDVSDSTNQAVTFEAVSHSPGCLSY 789 +N DV STN VT E +HSP + Y Subject 4653 TNVRDVGISTNGEVTGEEETHSPRSVQY 4736
Range 33: 9561 to 9620 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
28.1 bits(55) | 0.0 | 14/20(70%) | 0/20(0%) | Minus/Plus |
Query 114 FGG*RKCLGLAP*LPCKSHM 173 FGG*R+ LGL *L CKS M Subject 9561 FGG*RERLGLGL*LLCKSCM 9620
Range 34: 9156 to 9203 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
27.2 bits(53) | 0.0 | 12/16(75%) | 0/16(0%) | Minus/Plus |
Query 631 SSRRAICEVNTSGDPS 678 S RRAI EVNT G PS Subject 9156 SLRRAIREVNTGGTPS 9203
Range 35: 9312 to 9512 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.2 bits(112) | 0.0 | 31/67(46%) | 0/67(0%) | Minus/Plus |
Query 232 SFGVPFLLSSVHRWGEIFSYIFGTIGAIMIAHHVL*LFS*RQGRLGSNRWPTACSFRALEVLGSVRV 432 S G+PFLL S G + S I T IA V L + +GR+G+NR PTAC+ ALEVL V V Subject 9312 SLGLPFLLLSERTCGSLNSRILRTRDTSAIARQVSRLLALCRGRIGANR*PTACT*GALEVLDLVLV 9512
Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome
Sequence ID: KX701860.1 Length: 18020 Number of Matches: 36
Range 1: 274 to 657 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
168.3 bits(361) | 0.0 | 69/128(54%) | 0/128(0%) | Minus/Plus |
Query 700 LRQFSFPHVNSTLEFYRFNKGNSDVNKFIVNLKPAGGAKVVDFSPKCAAYVYIGKLTQGVKRVFAPSPVNGYTRQFALVSGNGVAVRADGEKVKLVARSNSSDVSDSTNQAVTFEAVSHSPGCLSYYK 1083 LR FSFPHVN+TLE+ R+NK NSDV F+ +K AG K+ DF+PK AA +YIGKLT+GVKR F P PV G+ RQ+A+VSG A+R DG+KV + AR+++S VSD+++ FEAV+H+ + Y++ Subject 274 LRVFSFPHVNNTLEYIRYNKANSDVGAFLTAMKFAGNVKLSDFTPKSAALIYIGKLTKGVKRTFVPPPVKGFARQYAVVSGTVSALRGDGKKVLMEARTSTSAVSDASSYDAVFEAVTHALIVVHYHR 657
Range 2: 8831 to 9019 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
73.9 bits(155) | 0.0 | 32/63(51%) | 0/63(0%) | Minus/Plus |
Query 243 LLGYPSYFRRCIDGEKFSPISLGRLALL**HTMCCDFSRSVRVG*GPTGGQQPALLERWKCWV 431 +LGYPSY R ++P+S G+ * C DF V+VG*GPTG QQPAL RWKCW+ Subject 8831 VLGYPSYSCRSAYAGVYTPVSYGQETHQL*RARCRDF*PCVKVG*GPTGDQQPALKVRWKCWI 9019
Range 3: 8994 to 9140 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
57.9 bits(120) | 0.0 | 29/49(59%) | 0/49(0%) | Minus/Plus |
Query 112 LEVLGSVRVHVSWPNICLGRVQQ*SLASLWGMTEVFRFSTVATM*VAHA 258 L+ GSV +S PNI LG VQ SL LWGMT RF TVA M*V HA Subject 8994 LKCAGSVGFGLSVPNILLGDVQVFSLVCLWGMTGATRFRTVAAM*VVHA 9140
Range 4: 9164 to 9250 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.9 bits(83) | 0.0 | 19/29(66%) | 0/29(0%) | Minus/Plus |
Query 12 HLGVCPRVASVRCPAASSKGR*KCWALQV 98 HLG PR ASVRC AA S R*KC L+V Subject 9164 HLGGSPRAASVRCLAAGSTER*KC*VLKV 9250
Range 5: 8641 to 8721 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
29.0 bits(57) | 0.0 | 15/27(56%) | 0/27(0%) | Minus/Plus |
Query 631 SYYKS*IPLLRSSRRAICEVNTSGDPS 711 SY L S RRAI EVNT G PS Subject 8641 SYLSQSSSLSSSLRRAIREVNTGGTPS 8721
Range 6: 8763 to 8825 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
25.8 bits(50) | 0.0 | 12/21(57%) | 0/21(0%) | Minus/Plus |
Query 432 FFV*SSP*G*YRLDLYSREFF 494 F V +P*G* R ++YSR FF Subject 8763 FLVLFTP*G*DRWNMYSRAFF 8825
Range 7: 276 to 623 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
98.2 bits(208) | 0.0 | 58/116(50%) | 0/116(0%) | Plus/Minus |
Query 734 TASNVTA*FVLSETSDEFDLATNLTFSPSALTATPLPLTKANCLV*PLTGDGANTRFTPWVSLPI*T*AAHFGEKSTTLAPPAGLRLTMNLLTSLFPLLNR*NSKVELT*GKEN*R 1081 TASN +* SET++ LA+ TF PS L A +PLT A C PLTG G N RFTP VSLPI AA G KS PA TSL LL SKV LT*GKE R Subject 276 TASNTAS*LDASETAEVEVLASIKTFLPSPLNALTVPLTTAYCRANPLTGGGTNVRFTPLVSLPIYMRAALLGVKSDNFTFPANFMAVRKAPTSLLALLYLMYSKVLLT*GKEKTR 623
Range 8: 9005 to 9142 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
59.7 bits(124) | 0.0 | 26/46(57%) | 0/46(0%) | Plus/Minus |
Query 110 SACATYMVATVLNLNTSVIPQRLARLYCCTRPKQMFGQLTCTRTEP 247 +AC TYM ATVLNL VIPQR +L CT PK++FG L T P Subject 9005 AACTTYMAATVLNLVAPVIPQRHTKLNTCTSPKRIFGTLRPNPTLP 9142
Range 9: 8884 to 9024 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
57.9 bits(120) | 0.0 | 24/47(51%) | 0/47(0%) | Plus/Minus |
Query 238 NRTQHFQRSKRAGCWPPVGP*PTLTLREKSQHMVCYHNSANRPKDIG 378 ++ QHFQR+ AGCW PVGP PTLT KS+H+ Y + P D G Subject 8884 DQIQHFQRTLSAGCWSPVGPYPTLTQG*KSRHLARYS*CVSCP*DTG 9024
Range 10: 9147 to 9257 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
55.1 bits(114) | 0.0 | 26/37(70%) | 0/37(0%) | Plus/Minus |
Query 5 PTIPAEPSTFSALLSWLLDT*PRLP*GKRPNALTQSA 115 PT+P+ PSTFSA S LLDT*P LP*G RPNA T A Subject 9147 PTVPSGPSTFSAP*SRLLDT*PMLP*GFRPNACTSYA 9257
Range 11: 8665 to 8721 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
36.3 bits(73) | 0.0 | 15/19(79%) | 0/19(0%) | Plus/Minus |
Query 631 RRIATGINLTDGSPRRP*Q 687 RR ATGINLTDG+P+R *Q Subject 8665 RRSATGINLTDGTPKRR*Q 8721
Range 12: 8764 to 8823 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
31.3 bits(62) | 0.0 | 12/20(60%) | 0/20(0%) | Plus/Minus |
Query 434 KTLYCTSQAGINLTD*TKRK 493 KTLYCT G++LT *TK++ Subject 8764 KTLYCTCSTGLSLTV*TKQE 8823
Range 13: 8835 to 8873 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
25.4 bits(49) | 0.0 | 8/13(62%) | 0/13(0%) | Plus/Minus |
Query 389 PHLCTDESRKGTP 427 PH+ +D+SRKG P Subject 8835 PHMRSDKSRKGNP 8873
Range 14: 8918 to 9022 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.4 bits(108) | 0.0 | 22/35(63%) | 0/35(0%) | Plus/Minus |
Query 240 PNPTLPAL*KSRLLATCWTLTYPDATRKVTTHGVL 344 PNPTLPA K RLL TCW L+Y D KV T G L Subject 8918 PNPTLPAHFKCRLLVTCWPLSYLDTRLKVATPGAL 9022
Range 15: 9151 to 9258 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.7 bits(100) | 0.0 | 20/36(56%) | 0/36(0%) | Plus/Minus |
Query 4 PHYTCRAQHFQRPFELAAGHLTEATLGQTPKCAHAI 111 P+ T R HFQR E AA HLT+A LG PKC H + Subject 9151 PNCTFRT*HFQRSVEPAARHLTDAALGLPPKCMHVL 9258
Range 16: 9046 to 9138 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.3 bits(99) | 0.0 | 21/31(68%) | 0/31(0%) | Plus/Minus |
Query 114 HVRLTW*LRC*T*TLPSSPKDSLDSTAVHDL 206 H RLTW L+ *T*+LPSSPKD+L+ T VH L Subject 9046 HARLTWQLQS*T*SLPSSPKDTLN*TPVHHL 9138
Range 17: 8651 to 8719 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
34.1 bits(68) | 0.0 | 12/23(52%) | 0/23(0%) | Plus/Minus |
Query 563 KKCHWYCPHRWHA*KRKLKPKTK 631 K+CH Y PH WHA*++ KT+ Subject 8651 KECHRY*PHGWHA*EKMTNWKTE 8719
Range 18: 8762 to 8827 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
30.4 bits(60) | 0.0 | 12/22(55%) | 0/22(0%) | Plus/Minus |
Query 430 RKNSLLYKSSRY*PHGLD*TKK 495 +KN+LLY R *PHG++ T+K Subject 8762 KKNALLYMFHRS*PHGVNKTRK 8827
Range 19: 8825 to 8869 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
23.5 bits(45) | 0.0 | 10/15(67%) | 0/15(0%) | Plus/Minus |
Query 393 IYAPTKVGRVPQKKK 437 I APT+VGRV Q K Subject 8825 ICAPTRVGRVTQDLK 8869
Range 20: 8826 to 9023 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
63.8 bits(133) | 0.0 | 36/66(55%) | 0/66(0%) | Minus/Plus |
Query 239 FFFWGTLPTFVGA*MGRNFLLYLWDDWRYYDSTPCVVTFLVASG*VRVQQVANSLLF*SAGSVGFG 436 F W TLPT VGA M LLYL D S P V TF + S * R QQV NSL AGSVGFG Subject 8826 FKSWVTLPTLVGAHMREFILLYLTDKRHISYSAPGVATFSLVSR*DRGQQVTNSLHLKCAGSVGFG 9023
Range 21: 9147 to 9260 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
39.6 bits(80) | 0.0 | 22/38(58%) | 0/38(0%) | Minus/Plus |
Query 2 C*LRERIWAFALG*PRLGVQQPAQKGAESAGLCRYSGV 115 C R IWA ALG R GV QPA + AESA RYS V Subject 9147 CVRRACIWAEALGQHRSGV*QPALRSAESARS*RYSWV 9260
Range 22: 416 to 523 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
39.1 bits(79) | 0.0 | 19/36(53%) | 0/36(0%) | Minus/Plus |
Query 834 PLTFILVSSPKG*SVYLPHHPLTAILGNSP*LAAMV 941 PL++ILVSSPKG*S H L + GN+P AA + Subject 416 PLSYILVSSPKG*SGRSSPHQLKGLRGNTPL*AAQL 523
Range 23: 8624 to 8722 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
38.6 bits(78) | 0.0 | 18/33(55%) | 0/33(0%) | Minus/Plus |
Query 630 ILPGVYRTINHESLCYGLLGEPSVRLIPVAILL 728 ++P RT +C+ LLG PSVRLIPVA+LL Subject 8624 LIPKGRRTYLSLPVCHLLLGVPSVRLIPVALLL 8722
Range 24: 9079 to 9138 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
32.7 bits(65) | 0.0 | 15/20(75%) | 0/20(0%) | Minus/Plus |
Query 114 FGG*RKCLGLAP*LPCKSHM 173 FGG*R+ LGL *LPCKS M Subject 9079 FGG*RERLGLGL*LPCKSCM 9138
Range 25: 9032 to 9094 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
31.8 bits(63) | 0.0 | 13/21(62%) | 0/21(0%) | Minus/Plus |
Query 158 AEHLFRSCTAVESSESLGDDG 220 A++ FR CT V+ S SLGDDG Subject 9032 AKYPFR*CTGVQFSVSLGDDG 9094
Range 26: 4171 to 4254 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
25.4 bits(49) | 0.0 | 12/28(43%) | 0/28(0%) | Minus/Plus |
Query 706 SNSSDVSDSTNQAVTFEAVSHSPGCLSY 789 +N DV STN V E +HSP + Y Subject 4171 TNVCDVGISTNGEVVGEEETHSPRSVLY 4254
Range 27: 8925 to 9026 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.7 bits(100) | 0.0 | 22/34(65%) | 0/34(0%) | Plus/Minus |
Query 236 RTEPNTSSALKEQAVGHLLDPNLP*RYEKSHNTW 337 +T+ NTSSAL QAVGHLL P LP* KS +TW Subject 8925 KTKSNTSSAL*VQAVGHLLAPILP*HKAKSRDTW 9026
Range 28: 9146 to 9259 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
46.9 bits(96) | 0.0 | 23/38(61%) | 0/38(0%) | Plus/Minus |
Query 3 TPLYLQSPALSAPF*AGCWTPNRGYPRANAQMRSRNQH 116 T LYLQ ALSA AGC TP+R PRA+AQM +R H Subject 9146 TQLYLQDLALSALRRAGC*TPDRCCPRASAQMHARLTH 9259
Range 29: 409 to 633 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
42.8 bits(87) | 0.0 | 28/75(37%) | 0/75(0%) | Plus/Minus |
Query 724 RMRDRFKRNGLIRTIGNVRRV*PSH*LDFLAVRPNRHTIAAN*GELPSIAVNG*WGKYTLHPLGELTNINVSGAL 948 RM FK + R +GN R P + L + AA+ G LP N + LHP GELTNI SG L Subject 409 RMCYSFKYGVVTRRVGNCRS*GPRLHQNLLTIPSQCTNCAAHNGVLPRKPFNWWGDERPLHPFGELTNIYESGTL 633
Range 30: 9078 to 9137 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
38.6 bits(78) | 0.0 | 14/20(70%) | 0/20(0%) | Plus/Minus |
Query 115 MCDLHGSYGAKPKHFRHPPK 174 M DLHGSY KP RHPPK Subject 9078 MHDLHGSYSPKPSRSRHPPK 9137
Range 31: 8630 to 8734 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
30.4 bits(60) | 0.0 | 15/35(43%) | 0/35(0%) | Plus/Minus |
Query 618 NLKLKKDRHWY*PHRWLA*KTVTKGFMIYSTINTR 722 N KK+ H Y*PH W A*+ +T ST R Subject 8630 NTHFKKECHRY*PHGWHA*EKMTNWKTEISTTTLR 8734
Range 32: 8763 to 8852 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
29.9 bits(59) | 0.0 | 14/30(47%) | 0/30(0%) | Plus/Minus |
Query 405 TKVGRVPQKKKLSTVQVKPVLTSRTRLNEK 494 ++ G K+K STV V PVL SR N+K Subject 8763 SRKGNPGLKEKRSTVHVPPVLASRCEQNKK 8852
Range 33: 268 to 345 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
28.6 bits(56) | 0.0 | 12/26(46%) | 0/26(0%) | Plus/Minus |
Query 1012 VTISLIKPVKLQSGVNVRKGELTQNT 1089 + ISL+ P LQ +++RKGE Q T Subject 268 IAISLVVPNVLQGIIDMRKGENAQRT 345
Range 34: 8836 to 9024 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
55.6 bits(115) | 0.0 | 30/63(48%) | 0/63(0%) | Minus/Plus |
Query 238 GVPFLLSSVHRWGEIFSYIFGTIGAIMIAHHVL*LFS*RQGRLGSNRWPTACSFRALEVLGSV 426 G+PFLL S G ++S I T IA V L + QGR+G+NR PTAC+ ALEVL V Subject 8836 GLPFLLLSERICGSLYSCILRTRDTSAIARQVSRLLALCQGRIGANR*PTACT*SALEVLDLV 9024
Grapevine leafroll associated virus 3 isolate 623, complete genome
Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 38
Range 1: 756 to 1139 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
165.1 bits(354) | 0.0 | 67/128(52%) | 0/128(0%) | Minus/Plus |
Query 700 LRQFSFPHVNSTLEFYRFNKGNSDVNKFIVNLKPAGGAKVVDFSPKCAAYVYIGKLTQGVKRVFAPSPVNGYTRQFALVSGNGVAVRADGEKVKLVARSNSSDVSDSTNQAVTFEAVSHSPGCLSYYK 1083 LR FSFPHVN+TLE+ R+NK NSDV F+ ++K G K+ DF+PK AA +YIGKLT+GVKR F P PV G+ RQ+A+VSG A+R DG+KV + AR+++S SD+++ FEAV+H+ + Y++ Subject 756 LRVFSFPHVNNTLEYIRYNKANSDVGAFLTSMKFTGNVKLSDFTPKSAALIYIGKLTKGVKRTFVPPPVKGFARQYAVVSGTVSALRGDGKKVLMEARTSTSASSDASSYDAVFEAVTHALIVVHYHR 1139
Range 2: 9313 to 9501 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
67.0 bits(140) | 0.0 | 30/63(48%) | 0/63(0%) | Minus/Plus |
Query 243 LLGYPSYFRRCIDGEKFSPISLGRLALL**HTMCCDFSRSVRVG*GPTGGQQPALLERWKCWV 431 +LGY SY R ++P+S G+ * C DF V+VG GPTG QQPAL RWKCW+ Subject 9313 VLGYLSYSCRSAYAGVYTPVSYGQETHQL*RARCRDF*PCVKVGWGPTGDQQPALKVRWKCWI 9501
Range 3: 9476 to 9622 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
57.9 bits(120) | 0.0 | 29/49(59%) | 0/49(0%) | Minus/Plus |
Query 112 LEVLGSVRVHVSWPNICLGRVQQ*SLASLWGMTEVFRFSTVATM*VAHA 258 L+ GSV +S PNI LG VQ SL LWGMT RF TVA M*V HA Subject 9476 LKCAGSVGFGLSVPNILLGDVQVFSLVCLWGMTGATRFRTVAAM*VVHA 9622
Range 4: 9646 to 9732 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.9 bits(83) | 0.0 | 19/29(66%) | 0/29(0%) | Minus/Plus |
Query 12 HLGVCPRVASVRCPAASSKGR*KCWALQV 98 HLG PR ASVRC AA S R*KC L+V Subject 9646 HLGGSPRAASVRCLAAGSTER*KC*VLKV 9732
Range 5: 78 to 173 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
30.4 bits(60) | 0.0 | 15/32(47%) | 0/32(0%) | Minus/Plus |
Query 1639 FSFYLGCFWV*LLSFLYFKNQKIFSSSRVLFS 1734 F FY CFWV LSF K + F S V+ S Subject 78 FVFYFSCFWVLRLSFS*TKTKVNFFFSAVVSS 173
Range 6: 9123 to 9203 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
29.9 bits(59) | 0.0 | 15/27(56%) | 0/27(0%) | Minus/Plus |
Query 631 SYYKS*IPLLRSSRRAICEVNTSGDPS 711 SY L S RRAI EVNT G PS Subject 9123 SYLSQSFSLSSSLRRAIREVNTGGTPS 9203
Range 7: 9245 to 9328 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
26.7 bits(52) | 0.0 | 12/28(43%) | 0/28(0%) | Minus/Plus |
Query 411 FFV*SSP*G*YRLDLYSREFFLLGYPSY 494 F V +P*G* R ++YSR FF + ++ Subject 9245 FLVLFTP*G*DRWNMYSRAFFFKSWVTF 9328
Range 8: 758 to 1105 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
92.3 bits(195) | 0.0 | 56/116(48%) | 0/116(0%) | Plus/Minus |
Query 734 TASNVTA*FVLSETSDEFDLATNLTFSPSALTATPLPLTKANCLV*PLTGDGANTRFTPWVSLPI*T*AAHFGEKSTTLAPPAGLRLTMNLLTSLFPLLNR*NSKVELT*GKEN*R 1081 TASN +* SE ++ LA+ TF PS L A +PLT A C PLTG G N RFTP VSLPI AA G KS P TSL LL SKV LT*GKE R Subject 758 TASNTAS*LDASEDAEVEVLASIKTFLPSPLNALTVPLTTAYCRANPLTGGGTNVRFTPLVSLPIYMRAALLGVKSDNFTFPVNFMDVRKAPTSLLALLYLMYSKVLLT*GKEKTR 1105
Range 9: 9487 to 9624 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
59.7 bits(124) | 0.0 | 26/46(57%) | 0/46(0%) | Plus/Minus |
Query 110 SACATYMVATVLNLNTSVIPQRLARLYCCTRPKQMFGQLTCTRTEP 247 +AC TYM ATVLNL VIPQR +L CT PK++FG L T P Subject 9487 AACTTYMAATVLNLVAPVIPQRHTKLNTCTSPKRIFGTLRPNPTLP 9624
Range 10: 9366 to 9506 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
57.9 bits(120) | 0.0 | 24/47(51%) | 0/47(0%) | Plus/Minus |
Query 238 NRTQHFQRSKRAGCWPPVGP*PTLTLREKSQHMVCYHNSANRPKDIG 378 ++ QHFQR+ AGCW PVGP PTLT KS+H+ Y + P D G Subject 9366 DQIQHFQRTLSAGCWSPVGPHPTLTQG*KSRHLARYS*CVSCP*DTG 9506
Range 11: 9629 to 9739 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
55.1 bits(114) | 0.0 | 26/37(70%) | 0/37(0%) | Plus/Minus |
Query 5 PTIPAEPSTFSALLSWLLDT*PRLP*GKRPNALTQSA 115 PT+P+ PSTFSA S LLDT*P LP*G RPNA T A Subject 9629 PTVPSGPSTFSAP*SRLLDT*PMLP*GFRPNACTSYA 9739
Range 12: 9141 to 9203 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
36.8 bits(74) | 0.0 | 15/21(71%) | 0/21(0%) | Plus/Minus |
Query 631 RRIATGINLTDGSPRRP*QRD 693 RR ATGINLTDG+P+R *Q + Subject 9141 RRSATGINLTDGTPKRR*QTE 9203
Range 13: 118 to 255 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
31.8 bits(63) | 0.0 | 17/46(37%) | 0/46(0%) | Plus/Minus |
Query 1494 GKLNTKVRTKNKNPKTHYTYLKENLTRRYSTQRKKNFLFF*LIRKN 1631 GKL R K + + KEN R Y Q K+ L L RKN Subject 118 GKLKMTRRDVLKGEEIFFVIFKENYNRNY*QQLKRKNLLLFLFRKN 255
Range 14: 9246 to 9305 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
31.3 bits(62) | 0.0 | 12/20(60%) | 0/20(0%) | Plus/Minus |
Query 434 KTLYCTSQAGINLTD*TKRK 493 KTLYCT G++LT *TK++ Subject 9246 KTLYCTCSTGLSLTV*TKQE 9305
Range 15: 255 to 350 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
26.7 bits(52) | 0.0 | 13/32(41%) | 0/32(0%) | Plus/Minus |
Query 1273 KRRSYLQEKEGYITNTNSKLKDKHEFNLNRRK 1368 KR + L+ G N+K + K + NLNRRK Subject 255 KRTNPLKRHLGKTKTKNTKTQRKLDANLNRRK 350
Range 16: 9317 to 9355 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
25.4 bits(49) | 0.0 | 8/13(62%) | 0/13(0%) | Plus/Minus |
Query 389 PHLCTDESRKGTP 427 PH+ +D+SRKG P Subject 9317 PHMRSDKSRKGNP 9355
Range 17: 9400 to 9504 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
49.2 bits(101) | 0.0 | 21/35(60%) | 0/35(0%) | Plus/Minus |
Query 240 PNPTLPAL*KSRLLATCWTLTYPDATRKVTTHGVL 344 PNPTLPA K RLL TCW +Y D KV T G L Subject 9400 PNPTLPAHFKCRLLVTCWPPSYLDTRLKVATPGAL 9504
Range 18: 9633 to 9740 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.7 bits(100) | 0.0 | 20/36(56%) | 0/36(0%) | Plus/Minus |
Query 4 PHYTCRAQHFQRPFELAAGHLTEATLGQTPKCAHAI 111 P+ T R HFQR E AA HLT+A LG PKC H + Subject 9633 PNCTFRT*HFQRSVEPAARHLTDAALGLPPKCMHVL 9740
Range 19: 9528 to 9620 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.3 bits(99) | 0.0 | 21/31(68%) | 0/31(0%) | Plus/Minus |
Query 114 HVRLTW*LRC*T*TLPSSPKDSLDSTAVHDL 206 H RLTW L+ *T*+LPSSPKD+L+ T VH L Subject 9528 HARLTWQLQS*T*SLPSSPKDTLN*TPVHHL 9620
Range 20: 9133 to 9201 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
34.1 bits(68) | 0.0 | 12/23(52%) | 0/23(0%) | Plus/Minus |
Query 563 KKCHWYCPHRWHA*KRKLKPKTK 631 K+CH Y PH WHA*++ KT+ Subject 9133 KECHRY*PHGWHA*EKMTN*KTE 9201
Range 21: 9244 to 9309 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
30.4 bits(60) | 0.0 | 12/22(55%) | 0/22(0%) | Plus/Minus |
Query 430 RKNSLLYKSSRY*PHGLD*TKK 495 +KN+LLY R *PHG++ T+K Subject 9244 KKNALLYMFHRS*PHGVNKTRK 9309
Range 22: 9308 to 9505 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
58.8 bits(122) | 0.0 | 34/66(52%) | 0/66(0%) | Minus/Plus |
Query 239 FFFWGTLPTFVGA*MGRNFLLYLWDDWRYYDSTPCVVTFLVASG*VRVQQVANSLLF*SAGSVGFG 436 F W T PT VGA M LLYL D S P V TF + S * QQV NSL AGSVGFG Subject 9308 FKSWVTFPTLVGAHMREFILLYLTDKRHISYSAPGVATFSLVSR*DGGQQVTNSLHLKCAGSVGFG 9505
Range 23: 898 to 1005 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.9 bits(83) | 0.0 | 20/36(56%) | 0/36(0%) | Minus/Plus |
Query 834 PLTFILVSSPKG*SVYLPHHPLTAILGNSP*LAAMV 941 PL++ILVSSPKG*S L H L + GN P AA + Subject 898 PLSYILVSSPKG*SGRLSPHQLKGLRGNMPL*AAQL 1005
Range 24: 9106 to 9204 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.9 bits(83) | 0.0 | 19/33(58%) | 0/33(0%) | Minus/Plus |
Query 630 ILPGVYRTINHESLCYGLLGEPSVRLIPVAILL 728 ++P RT S+C+ LLG PSVRLIPVA+LL Subject 9106 LIPKGRRTYLSLSVCHLLLGVPSVRLIPVALLL 9204
Range 25: 9629 to 9742 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
39.6 bits(80) | 0.0 | 22/38(58%) | 0/38(0%) | Minus/Plus |
Query 2 C*LRERIWAFALG*PRLGVQQPAQKGAESAGLCRYSGV 115 C R IWA ALG R GV QPA + AESA RYS V Subject 9629 CVRRACIWAEALGQHRSGV*QPALRSAESARS*RYSWV 9742
Range 26: 9561 to 9620 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
32.7 bits(65) | 0.0 | 15/20(75%) | 0/20(0%) | Minus/Plus |
Query 114 FGG*RKCLGLAP*LPCKSHM 173 FGG*R+ LGL *LPCKS M Subject 9561 FGG*RERLGLGL*LPCKSCM 9620
Range 27: 9514 to 9576 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
31.8 bits(63) | 0.0 | 13/21(62%) | 0/21(0%) | Minus/Plus |
Query 158 AEHLFRSCTAVESSESLGDDG 220 A++ FR CT V+ S SLGDDG Subject 9514 AKYPFR*CTGVQFSVSLGDDG 9576
Range 28: 4653 to 4736 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
25.4 bits(49) | 0.0 | 12/28(43%) | 0/28(0%) | Minus/Plus |
Query 706 SNSSDVSDSTNQAVTFEAVSHSPGCLSY 789 +N DV STN V E +HSP + Y Subject 4653 TNVRDVGISTNGEVVGEEETHSPRSVLY 4736
Range 29: 9407 to 9508 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.7 bits(100) | 0.0 | 22/34(65%) | 0/34(0%) | Plus/Minus |
Query 236 RTEPNTSSALKEQAVGHLLDPNLP*RYEKSHNTW 337 +T+ NTSSAL QAVGHLL P LP* KS +TW Subject 9407 KTKSNTSSAL*VQAVGHLLAPILP*HKAKSRDTW 9508
Range 30: 9628 to 9741 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
46.9 bits(96) | 0.0 | 23/38(61%) | 0/38(0%) | Plus/Minus |
Query 3 TPLYLQSPALSAPF*AGCWTPNRGYPRANAQMRSRNQH 116 T LYLQ ALSA AGC TP+R PRA+AQM +R H Subject 9628 TQLYLQDLALSALRRAGC*TPDRCCPRASAQMHARLTH 9741
Range 31: 9560 to 9619 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
38.6 bits(78) | 0.0 | 14/20(70%) | 0/20(0%) | Plus/Minus |
Query 115 MCDLHGSYGAKPKHFRHPPK 174 M DLHGSY KP RHPPK Subject 9560 MHDLHGSYSPKPSRSRHPPK 9619
Range 32: 9245 to 9334 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
29.9 bits(59) | 0.0 | 14/30(47%) | 0/30(0%) | Plus/Minus |
Query 405 TKVGRVPQKKKLSTVQVKPVLTSRTRLNEK 494 ++ G K+K STV V PVL SR N+K Subject 9245 SRKGNPGLKEKRSTVHVPPVLASRCEQNKK 9334
Range 33: 9156 to 9209 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
29.5 bits(58) | 0.0 | 13/18(72%) | 0/18(0%) | Plus/Minus |
Query 555 TRIRSATGIALTDGTRRR 608 T RSATGI LTDGT +R Subject 9156 TSRRSATGINLTDGTPKR 9209
Range 34: 9318 to 9506 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
55.6 bits(115) | 0.0 | 30/63(48%) | 0/63(0%) | Minus/Plus |
Query 238 GVPFLLSSVHRWGEIFSYIFGTIGAIMIAHHVL*LFS*RQGRLGSNRWPTACSFRALEVLGSV 426 G+PFLL S G ++S I T IA V L + QGR+G+NR PTAC+ ALEVL V Subject 9318 GLPFLLLSERICGSLYSCILRTRDTSAIARQVSRLLALCQGRMGANR*PTACT*SALEVLDLV 9506
Range 35: 911 to 982 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
37.7 bits(76) | 0.0 | 16/24(67%) | 0/24(0%) | Minus/Plus |
Query 857 YW*AHPRGEACICPITR*RLY*AI 928 YW*AH RGEA +CP T *R+ AI Subject 911 YW*AHQRGEADVCPPTS*RVCAAI 982
Range 36: 9164 to 9196 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
24.9 bits(48) | 0.0 | 8/11(73%) | 0/11(0%) | Minus/Plus |
Query 568 ACHL*GQYQWH 600 ACH *G Y+WH Subject 9164 ACHP*G*YRWH 9196
Range 37: 891 to 1115 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
41.4 bits(84) | 0.0 | 28/75(37%) | 0/75(0%) | Plus/Minus |
Query 724 RMRDRFKRNGLIRTIGNVRRV*PSH*LDFLAVRPNRHTIAAN*GELPSIAVNG*WGKYTLHPLGELTNINVSGAL 948 RM FK + R +G R P + L + AA+ G LP N K LHP GELTNI SG L Subject 891 RMCYSFKYGVVTRRVGRCRS*GPRLHQNLLTIPSQCTNCAAHNGILPRKPFNWWGDKRPLHPFGELTNIYESGTL 1115
Nucleotide Sequence (293 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
234.3 | 1183.1 | 33% | 3.344e-60 | 87% | JX559645.1 | |
234.3 | 1164.8 | 33% | 3.344e-60 | 85% | NC_004667.1 | |
234.3 | 1313.2 | 28% | 3.344e-60 | 100% | KJ174518.1 | |
234.3 | 1164.8 | 33% | 3.344e-60 | 85% | AF037268.2 | |
234.3 | 1183.1 | 33% | 3.344e-60 | 87% | GQ352631.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 6
Range 1: 6783 to 7073 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
234.3 bits(505) | 0.0 | 97/97(100%) | 0/97(0%) | Plus/Plus |
Query 3 QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP 293 QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP Subject 6783 QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP 7073
Range 2: 6783 to 7073 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
200.4 bits(431) | 0.0 | 86/97(89%) | 0/97(0%) | Minus/Minus |
Query 3 WPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQQVANV*RTSV*FRSVYNTFLLWNKYSTIHPKHLLPVYEWYLIYVSKKEAFRRASREDA*L**AL 293 WPFGQ S+Y ILT NDLFRVTLFRSPYGH*GQQVAN+*RT V*FRSVYN FLLWNK STIHPKHLLPVYEWYLIYVSKKEAFRRA EDA*L**AL Subject 6783 WPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**AL 7073
Range 3: 6781 to 7071 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
198.6 bits(427) | 0.0 | 84/97(87%) | 0/97(0%) | Minus/Minus |
Query 1 AFWTVISLPAYPYH*RPFQGNTFPFPLRSLRTTSSKRLTDICMI*KCIQHFPSLEQIQHNPS*TPSPCL*MVSDLCLQKRGLQTRQSRRRLIVVSLD 291 AFWT I L YPY *RPFQGNTFPFPLRSLRTTSSK LTD CMI*KCIQ FPSLEQ QHNPS*TPSPCL*MVSDLCLQKRGL TR+ RRRL+VVSLD Subject 6781 AFWTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLD 7071
Range 4: 6781 to 7071 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
195.8 bits(421) | 0.0 | 86/97(89%) | 0/97(0%) | Plus/Plus |
Query 1 IKAYYN*ASSRLARLKASFLET*IRYHS*TGRRCLGWIVLYLFQRRKVLYTLLNHTDVR*TFATCCPQ*P*GERKSVTLKRSLVVRISR**DHCPKG 291 IKAYYN*ASS+ AR KASFLET*IRYHS*TGRRCLGWIVL+LFQRRK LYTLLNHT VR* FATCCPQ*P*GERKSVTLKRSL VRI++**D CPKG Subject 6781 IKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKG 7071
Range 5: 6782 to 7021 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
183.4 bits(394) | 0.0 | 78/80(98%) | 0/80(0%) | Minus/Minus |
Query 2 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTNTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPNCSKP* 241 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGT TAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTP+CSKP* Subject 6782 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP* 7021
Range 6: 6782 to 7072 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
170.6 bits(366) | 0.0 | 84/97(87%) | 0/97(0%) | Plus/Plus |
Query 2 SRLTTIRRLRDWRV*RPLFWRHKSDTIHKQGEGV*DGLCCICSKEGKCCIHF*IIQMSXXXXXXXXXNDRKGNGKVLP*KGR*W*G*AGSEITVQKA 292 SRLTT RRLR+ RV RPLFWRHKSDTIHKQGEGV*DGLCC CSKEGK CIHF*IIQ+SVR LLLVVLNDRKGNGKVLP*KGR* *G* S+I VQKA Subject 6782 SRLTTTRRLRNRRVGRPLFWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKA 7072
Grapevine leafroll associated virus 3, complete genome
Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 6
Range 1: 6204 to 6494 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
234.3 bits(505) | 0.0 | 97/97(100%) | 0/97(0%) | Plus/Plus |
Query 3 QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP 293 QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP Subject 6204 QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP 6494
Range 2: 6204 to 6494 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
197.6 bits(425) | 0.0 | 84/97(87%) | 0/97(0%) | Minus/Minus |
Query 3 WPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQQVANV*RTSV*FRSVYNTFLLWNKYSTIHPKHLLPVYEWYLIYVSKKEAFRRASREDA*L**AL 293 WPFGQ S+Y +LT NDLFRVTLFRSPYGH*GQQVAN+*RT V FRSVYN FLLWNK STIHPKHLLPVYEWYLIYVSKKEAFRRA EDA*L**AL Subject 6204 WPFGQRSYYWFVLTANDLFRVTLFRSPYGH*GQQVANI*RTPVRFRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**AL 6494
Range 3: 6202 to 6492 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
191.7 bits(412) | 0.0 | 82/97(85%) | 0/97(0%) | Minus/Minus |
Query 1 AFWTVISLPAYPYH*RPFQGNTFPFPLRSLRTTSSKRLTDICMI*KCIQHFPSLEQIQHNPS*TPSPCL*MVSDLCLQKRGLQTRQSRRRLIVVSLD 291 AFWT I L PY *RPFQGNTFPFPLRSLRTTSSK LTD C I*KCIQ FPSLEQ QHNPS*TPSPCL*MVSDLCLQKRGL TR+ RRRL+VVSLD Subject 6202 AFWTAILLLVCPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCTI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLD 6492
Range 4: 6202 to 6492 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
189.8 bits(408) | 0.0 | 84/97(87%) | 0/97(0%) | Plus/Plus |
Query 1 IKAYYN*ASSRLARLKASFLET*IRYHS*TGRRCLGWIVLYLFQRRKVLYTLLNHTDVR*TFATCCPQ*P*GERKSVTLKRSLVVRISR**DHCPKG 291 IKAYYN*ASS+ AR KASFLET*IRYHS*TGRRCLGWIVL+LFQRRK LYTLLN T VR* FATCCPQ*P*GERKSVTLKRSL VR ++**D CPKG Subject 6202 IKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNRTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRTNQ**DRCPKG 6492
Range 5: 6203 to 6442 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
183.4 bits(394) | 0.0 | 78/80(98%) | 0/80(0%) | Minus/Minus |
Query 2 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTNTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPNCSKP* 241 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGT TAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTP+CSKP* Subject 6203 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP* 6442
Range 6: 6203 to 6493 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
167.9 bits(360) | 0.0 | 82/97(85%) | 0/97(0%) | Plus/Plus |
Query 2 SRLTTIRRLRDWRV*RPLFWRHKSDTIHKQGEGV*DGLCCICSKEGKCCIHF*IIQMSXXXXXXXXXNDRKGNGKVLP*KGR*W*G*AGSEITVQKA 292 SRLTT RRLR+ RV RPLFWRHKSDTIHKQGEGV*DGLCC CSKEGK CIHF*I+Q+SVR LLLVVLNDRKGNGKVLP*KGR* *G S+I VQKA Subject 6203 SRLTTTRRLRNRRVGRPLFWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IVQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*GQTSSKIAVQKA 6493
Grapevine leafroll associated virus 3, complete genome
Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 6
Range 1: 6783 to 7073 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
234.3 bits(505) | 0.0 | 97/97(100%) | 0/97(0%) | Plus/Plus |
Query 3 QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP 293 QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP Subject 6783 QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP 7073
Range 2: 6781 to 7071 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
232.5 bits(501) | 0.0 | 97/97(100%) | 0/97(0%) | Minus/Minus |
Query 1 AFWTVISLPAYPYH*RPFQGNTFPFPLRSLRTTSSKRLTDICMI*KCIQHFPSLEQIQHNPS*TPSPCL*MVSDLCLQKRGLQTRQSRRRLIVVSLD 291 AFWTVISLPAYPYH*RPFQGNTFPFPLRSLRTTSSKRLTDICMI*KCIQHFPSLEQIQHNPS*TPSPCL*MVSDLCLQKRGLQTRQSRRRLIVVSLD Subject 6781 AFWTVISLPAYPYH*RPFQGNTFPFPLRSLRTTSSKRLTDICMI*KCIQHFPSLEQIQHNPS*TPSPCL*MVSDLCLQKRGLQTRQSRRRLIVVSLD 7071
Range 3: 6783 to 7073 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.9 bits(491) | 0.0 | 97/97(100%) | 0/97(0%) | Minus/Minus |
Query 3 WPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQQVANV*RTSV*FRSVYNTFLLWNKYSTIHPKHLLPVYEWYLIYVSKKEAFRRASREDA*L**AL 293 WPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQQVANV*RTSV*FRSVYNTFLLWNKYSTIHPKHLLPVYEWYLIYVSKKEAFRRASREDA*L**AL Subject 6783 WPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQQVANV*RTSV*FRSVYNTFLLWNKYSTIHPKHLLPVYEWYLIYVSKKEAFRRASREDA*L**AL 7073
Range 4: 6781 to 7071 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
221.9 bits(478) | 0.0 | 97/97(100%) | 0/97(0%) | Plus/Plus |
Query 1 IKAYYN*ASSRLARLKASFLET*IRYHS*TGRRCLGWIVLYLFQRRKVLYTLLNHTDVR*TFATCCPQ*P*GERKSVTLKRSLVVRISR**DHCPKG 291 IKAYYN*ASSRLARLKASFLET*IRYHS*TGRRCLGWIVLYLFQRRKVLYTLLNHTDVR*TFATCCPQ*P*GERKSVTLKRSLVVRISR**DHCPKG Subject 6781 IKAYYN*ASSRLARLKASFLET*IRYHS*TGRRCLGWIVLYLFQRRKVLYTLLNHTDVR*TFATCCPQ*P*GERKSVTLKRSLVVRISR**DHCPKG 7071
Range 5: 6782 to 7072 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
208.2 bits(448) | 0.0 | 97/97(100%) | 0/97(0%) | Plus/Plus |
Query 2 SRLTTIRRLRDWRV*RPLFWRHKSDTIHKQGEGV*DGLCCICSKEGKCCIHF*IIQMSXXXXXXXXXNDRKGNGKVLP*KGR*W*G*AGSEITVQKA 292 SRLTTIRRLRDWRV*RPLFWRHKSDTIHKQGEGV*DGLCCICSKEGKCCIHF*IIQMSVRRLLLVVLNDRKGNGKVLP*KGR*W*G*AGSEITVQKA Subject 6782 SRLTTIRRLRDWRV*RPLFWRHKSDTIHKQGEGV*DGLCCICSKEGKCCIHF*IIQMSVRRLLLVVLNDRKGNGKVLP*KGR*W*G*AGSEITVQKA 7072
Range 6: 6782 to 7021 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
188.5 bits(405) | 0.0 | 80/80(100%) | 0/80(0%) | Minus/Minus |
Query 2 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTNTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPNCSKP* 241 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTNTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPNCSKP* Subject 6782 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTNTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPNCSKP* 7021
Grapevine leafroll associated virus 3, complete genome
Sequence ID: AF037268.2 Length: 17919 Number of Matches: 6
Range 1: 6204 to 6494 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
234.3 bits(505) | 0.0 | 97/97(100%) | 0/97(0%) | Plus/Plus |
Query 3 QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP 293 QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP Subject 6204 QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP 6494
Range 2: 6204 to 6494 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
197.6 bits(425) | 0.0 | 84/97(87%) | 0/97(0%) | Minus/Minus |
Query 3 WPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQQVANV*RTSV*FRSVYNTFLLWNKYSTIHPKHLLPVYEWYLIYVSKKEAFRRASREDA*L**AL 293 WPFGQ S+Y +LT NDLFRVTLFRSPYGH*GQQVAN+*RT V FRSVYN FLLWNK STIHPKHLLPVYEWYLIYVSKKEAFRRA EDA*L**AL Subject 6204 WPFGQRSYYWFVLTANDLFRVTLFRSPYGH*GQQVANI*RTPVRFRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**AL 6494
Range 3: 6202 to 6492 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
191.7 bits(412) | 0.0 | 82/97(85%) | 0/97(0%) | Minus/Minus |
Query 1 AFWTVISLPAYPYH*RPFQGNTFPFPLRSLRTTSSKRLTDICMI*KCIQHFPSLEQIQHNPS*TPSPCL*MVSDLCLQKRGLQTRQSRRRLIVVSLD 291 AFWT I L PY *RPFQGNTFPFPLRSLRTTSSK LTD C I*KCIQ FPSLEQ QHNPS*TPSPCL*MVSDLCLQKRGL TR+ RRRL+VVSLD Subject 6202 AFWTAILLLVCPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCTI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLD 6492
Range 4: 6202 to 6492 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
189.8 bits(408) | 0.0 | 84/97(87%) | 0/97(0%) | Plus/Plus |
Query 1 IKAYYN*ASSRLARLKASFLET*IRYHS*TGRRCLGWIVLYLFQRRKVLYTLLNHTDVR*TFATCCPQ*P*GERKSVTLKRSLVVRISR**DHCPKG 291 IKAYYN*ASS+ AR KASFLET*IRYHS*TGRRCLGWIVL+LFQRRK LYTLLN T VR* FATCCPQ*P*GERKSVTLKRSL VR ++**D CPKG Subject 6202 IKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNRTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRTNQ**DRCPKG 6492
Range 5: 6203 to 6442 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
183.4 bits(394) | 0.0 | 78/80(98%) | 0/80(0%) | Minus/Minus |
Query 2 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTNTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPNCSKP* 241 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGT TAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTP+CSKP* Subject 6203 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP* 6442
Range 6: 6203 to 6493 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
167.9 bits(360) | 0.0 | 82/97(85%) | 0/97(0%) | Plus/Plus |
Query 2 SRLTTIRRLRDWRV*RPLFWRHKSDTIHKQGEGV*DGLCCICSKEGKCCIHF*IIQMSXXXXXXXXXNDRKGNGKVLP*KGR*W*G*AGSEITVQKA 292 SRLTT RRLR+ RV RPLFWRHKSDTIHKQGEGV*DGLCC CSKEGK CIHF*I+Q+SVR LLLVVLNDRKGNGKVLP*KGR* *G S+I VQKA Subject 6203 SRLTTTRRLRNRRVGRPLFWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IVQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*GQTSSKIAVQKA 6493
Grapevine leafroll associated virus 3 isolate 621, complete genome
Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 6
Range 1: 6783 to 7073 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
234.3 bits(505) | 0.0 | 97/97(100%) | 0/97(0%) | Plus/Plus |
Query 3 QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP 293 QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP Subject 6783 QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP 7073
Range 2: 6783 to 7073 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
200.4 bits(431) | 0.0 | 86/97(89%) | 0/97(0%) | Minus/Minus |
Query 3 WPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQQVANV*RTSV*FRSVYNTFLLWNKYSTIHPKHLLPVYEWYLIYVSKKEAFRRASREDA*L**AL 293 WPFGQ S+Y ILT NDLFRVTLFRSPYGH*GQQVAN+*RT V*FRSVYN FLLWNK STIHPKHLLPVYEWYLIYVSKKEAFRRA EDA*L**AL Subject 6783 WPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**AL 7073
Range 3: 6781 to 7071 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
198.6 bits(427) | 0.0 | 84/97(87%) | 0/97(0%) | Minus/Minus |
Query 1 AFWTVISLPAYPYH*RPFQGNTFPFPLRSLRTTSSKRLTDICMI*KCIQHFPSLEQIQHNPS*TPSPCL*MVSDLCLQKRGLQTRQSRRRLIVVSLD 291 AFWT I L YPY *RPFQGNTFPFPLRSLRTTSSK LTD CMI*KCIQ FPSLEQ QHNPS*TPSPCL*MVSDLCLQKRGL TR+ RRRL+VVSLD Subject 6781 AFWTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLD 7071
Range 4: 6781 to 7071 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
195.8 bits(421) | 0.0 | 86/97(89%) | 0/97(0%) | Plus/Plus |
Query 1 IKAYYN*ASSRLARLKASFLET*IRYHS*TGRRCLGWIVLYLFQRRKVLYTLLNHTDVR*TFATCCPQ*P*GERKSVTLKRSLVVRISR**DHCPKG 291 IKAYYN*ASS+ AR KASFLET*IRYHS*TGRRCLGWIVL+LFQRRK LYTLLNHT VR* FATCCPQ*P*GERKSVTLKRSL VRI++**D CPKG Subject 6781 IKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKG 7071
Range 5: 6782 to 7021 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
183.4 bits(394) | 0.0 | 78/80(98%) | 0/80(0%) | Minus/Minus |
Query 2 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTNTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPNCSKP* 241 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGT TAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTP+CSKP* Subject 6782 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP* 7021
Range 6: 6782 to 7072 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
170.6 bits(366) | 0.0 | 84/97(87%) | 0/97(0%) | Plus/Plus |
Query 2 SRLTTIRRLRDWRV*RPLFWRHKSDTIHKQGEGV*DGLCCICSKEGKCCIHF*IIQMSXXXXXXXXXNDRKGNGKVLP*KGR*W*G*AGSEITVQKA 292 SRLTT RRLR+ RV RPLFWRHKSDTIHKQGEGV*DGLCC CSKEGK CIHF*IIQ+SVR LLLVVLNDRKGNGKVLP*KGR* *G* S+I VQKA Subject 6782 SRLTTTRRLRNRRVGRPLFWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKA 7072
Nucleotide Sequence (322 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
238.0 | 1278.5 | 21% | 3.234e-61 | 98% | KM058745.1 | |
198.6 | 580.7 | 31% | 2.355e-49 | 40% | JQ796828.1 | |
197.6 | 571.7 | 38% | 4.445e-49 | 35% | GQ352632.1 | |
197.6 | 571.7 | 38% | 4.445e-49 | 35% | EU259806.1 | |
197.6 | 571.7 | 38% | 4.445e-49 | 35% | KX756668.1 |
Alignments
Grapevine leafroll associated virus 3 isolate GH24, complete genome
Sequence ID: KM058745.1 Length: 18493 Number of Matches: 7
Range 1: 13081 to 13374 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
238.0 bits(513) | 0.0 | 98/98(100%) | 0/98(0%) | Plus/Minus |
Query 27 RVINQNDNQRGYWGQPQPTILLH*TTN*FFSEGGANFTAFTYA*VVTQS*KIRREFMKRVE*FYRHVRFQLFDSPGHFLIEESFQNCFYRDHNVVYPS 320 RVINQNDNQRGYWGQPQPTILLH*TTN*FFSEGGANFTAFTYA*VVTQS*KIRREFMKRVE*FYRHVRFQLFDSPGHFLIEESFQNCFYRDHNVVYPS Subject 13081 RVINQNDNQRGYWGQPQPTILLH*TTN*FFSEGGANFTAFTYA*VVTQS*KIRREFMKRVE*FYRHVRFQLFDSPGHFLIEESFQNCFYRDHNVVYPS 13374
Range 2: 13081 to 13374 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
230.2 bits(496) | 0.0 | 97/98(99%) | 0/98(0%) | Minus/Plus |
Query 27 AWVYHVVVTVKTILKAFFNKEMPGGIKELKPYVPIESFDPFHELSSYFSRLSYDLSVGKGSKICPTLAEKLVRRLMEENCRLRLTPVAALIIILIYYS 320 AWVY VVVTVKTILKAFFNKEMPGGIKELKPYVPIESFDPFHELSSYFSRLSYDLSVGKGSKICPTLAEKLVRRLMEENCRLRLTPVAALIIILIYYS Subject 13081 AWVYDVVVTVKTILKAFFNKEMPGGIKELKPYVPIESFDPFHELSSYFSRLSYDLSVGKGSKICPTLAEKLVRRLMEENCRLRLTPVAALIIILIYYS 13374
Range 3: 13079 to 13372 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
223.8 bits(482) | 0.0 | 97/98(99%) | 0/98(0%) | Plus/Minus |
Query 29 SNKSK**SARLLGSTSTYNSPPLDDELVFQRGWGKFYCLYLRLSRNSVLKNKTRVHEKGRMILSARTVSTL*FPRAFPY*RKLSKLFLP*PQRGIPKP 322 SNKSK**SARLLGSTSTYNSPPLDDELVFQRGWGKFYCLYLRLSRNSVLKNKTRVHEKGRMILSARTVSTL*FPRAFPY*RKLSKLFLP*PQR IPKP Subject 13079 SNKSK**SARLLGSTSTYNSPPLDDELVFQRGWGKFYCLYLRLSRNSVLKNKTRVHEKGRMILSARTVSTL*FPRAFPY*RKLSKLFLP*PQRRIPKP 13372
Range 4: 13079 to 13372 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
214.6 bits(462) | 0.0 | 98/98(100%) | 0/98(0%) | Minus/Plus |
Query 29 WLGYTTLWSR*KQF*KLSSIRKCPGESKS*NRTCR*NHSTLFMNSRLIFQD*VTT*A*VKAVKFAPPSLKN*FVV*WRRIVG*G*PQ*PR*LSF*FIT 322 WLGYTTLWSR*KQF*KLSSIRKCPGESKS*NRTCR*NHSTLFMNSRLIFQD*VTT*A*VKAVKFAPPSLKN*FVV*WRRIVG*G*PQ*PR*LSF*FIT Subject 13079 WLGYTTLWSR*KQF*KLSSIRKCPGESKS*NRTCR*NHSTLFMNSRLIFQD*VTT*A*VKAVKFAPPSLKN*FVV*WRRIVG*G*PQ*PR*LSF*FIT 13372
Range 5: 13080 to 13373 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
200.4 bits(431) | 0.0 | 97/98(99%) | 0/98(0%) | Minus/Plus |
Query 28 GLGIPRCGHGKNNFESFLQ*GNARGNQRVETVRADRIIRPFS*TLVLFFKTEXXXXXXXRQ*NLPHPR*KTSSSSNGGEL*VEVDPSSRADYHFDLLL 321 GLGI RCGHGKNNFESFLQ*GNARGNQRVETVRADRIIRPFS*TLVLFFKTELRLKRR*RQ*NLPHPR*KTSSSSNGGEL*VEVDPSSRADYHFDLLL Subject 13080 GLGIRRCGHGKNNFESFLQ*GNARGNQRVETVRADRIIRPFS*TLVLFFKTELRLKRR*RQ*NLPHPR*KTSSSSNGGEL*VEVDPSSRADYHFDLLL 13373
Grapevine leafroll associated virus 3 clone 3, complete genome
Sequence ID: JQ796828.1 Length: 18552 Number of Matches: 7
Range 1: 13146 to 13439 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
198.6 bits(427) | 0.0 | 82/98(84%) | 0/98(0%) | Minus/Plus |
Query 27 AWVYHVVVTVKTILKAFFNKEMPGGIKELKPYVPIESFDPFHELSSYFSRLSYDLSVGKGSKICPTLAEKLVRRLMEENCRLRLTPVAALIIILIYYS 320 +WVY VV T+KT LK FFNK+M GGIKELKPYVPIESFDPFHELSSYFSRLSY LS GKG+KICP LAEKLVRRLME+N RLRLTPVA+LIIIL+YYS Subject 13146 SWVYDVVATIKTALKLFFNKDMLGGIKELKPYVPIESFDPFHELSSYFSRLSYQLSAGKGAKICPELAEKLVRRLMEDNHRLRLTPVASLIIILVYYS 13439
Range 2: 13148 to 13267 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
65.7 bits(137) | 0.0 | 29/40(72%) | 0/40(0%) | Plus/Minus |
Query 199 KGSNDSIGTYGFNSLIPPGISLLKKAFKIVFTVTTTWYTQ 318 KGSNDSIGT GFNSL+PP +SLLKK+FK V V TT TQ Subject 13148 KGSNDSIGT*GFNSLMPPNMSLLKKSFKAVLIVATTS*TQ 13267
Range 3: 13331 to 13438 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
50.6 bits(104) | 0.0 | 25/36(69%) | 0/36(0%) | Plus/Minus |
Query 28 E**IKMIISAATGVNLNLQFSSIRRRTSFSARVGQI 135 E** +II+ ATGV+LNL SSIRRRT+FSA GQI Subject 13331 E**TNIIINEATGVSLNL*LSSIRRRTNFSASSGQI 13438
Range 4: 13149 to 13436 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.9 bits(168) | 0.0 | 43/96(45%) | 0/96(0%) | Plus/Minus |
Query 30 VINQNDNQRGYWGQPQPTILLH*TTN*FFSEGGANFTAFTYA*VVTQS*KIRREFMKRVE*FYRHVRFQLFDSPGHFLIEESFQNCFYRDHNVVYP 317 +INQ NQRG+ Q I+ H T N F E A+F+ F+ *+VT KIRR M+R+E* +V F LF++ H LI+E FQ+ R H VV P Subject 13149 IINQYYNQRGHRS*SQSVIIFHKTANQFLCELRADFSTFSGT*LVT*PRKIRR*LMERIE*LDWYVGF*LFNATQHVLIKEKFQSSLNRGHYVVDP 13436
Range 5: 13144 to 13434 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
68.4 bits(143) | 0.0 | 45/97(46%) | 0/97(0%) | Minus/Plus |
Query 32 WLGYTTLWSR*KQF*KLSSIRKCPGESKS*NRTCR*NHSTLFMNSRLIFQD*VTT*A*VKAVKFAPPSLKN*FVV*WRRIVG*G*PQ*PR*LSF*FI 322 +LG TT W R + * S IR C KS*N T + +HS L M+ RLIF+ *VT * K +K A S +N F V W+ I * * + PR*L + FI Subject 13144 FLGSTT*WPRLRLL*NFSLIRTCWVALKS*NPTYQSSHSILSMSYRLIFRG*VTN*VPEKVLKSALSSQRNWFAVLWKIITD*D*LRWPR*L*YWFI 13434
Range 6: 13148 to 13435 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
65.7 bits(137) | 0.0 | 41/96(43%) | 0/96(0%) | Minus/Plus |
Query 31 LGIPRCGHGKNNFESFLQ*GNARGNQRVETVRADRIIRPFS*TLVLFFKTEXXXXXXXRQ*NLPHPR*KTSSSSNGGEL*VEVDPSSRADYHFDLL 318 LG+ R GH + FE+FL *G+ + RV+T+R +R+IR F * +VLFF+ +L K R R *NLP R + S S G +E + DY+ LL Subject 13148 LGLRRSGHD*DCFETFL**GHVGWH*RVKTLRTNRVIRSFP*AIVLFFEVKLPTKCRKRC*NLP*ARREIGSPSYGR*SQIETNSGGLVDYNIGLL 13435
Range 7: 13147 to 13437 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.9 bits(107) | 0.0 | 39/97(40%) | 0/97(0%) | Plus/Minus |
Query 29 SNKSK**SARLLGSTSTYNSPPLDDELVFQRGWGKFYCLYLRLSRNSVLKNKTRVHEKGRMILSARTVSTL*FPRAFPY*RKLSKLFLP*PQRGIPK 319 +NK *S R S + P D E + R G+F L+ L N KNKT H K RM R V TL* PY*RK+SK P R PK Subject 13147 NNKPIL*STRPPELVSICDYLP*DGEPISLRAQGRF*HLFRHLVGNLTSKNKTIAHGKDRMTRLVRRVLTL*CHPTCPY*RKVSKQS*SWPLRRRPK 13437
Grapevine leafroll associated virus 3 isolate 623, complete genome
Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 8
Range 1: 13081 to 13374 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
197.6 bits(425) | 0.0 | 78/98(80%) | 0/98(0%) | Minus/Plus |
Query 27 AWVYHVVVTVKTILKAFFNKEMPGGIKELKPYVPIESFDPFHELSSYFSRLSYDLSVGKGSKICPTLAEKLVRRLMEENCRLRLTPVAALIIILIYYS 320 AWVY V+ T+K ++K+FFNK+ PGGIK+LKPYVPIESFDPFHELSSYFSRLSY+++ GKG KICP +AEKLVRRLMEEN RLRLTPVAALII+LIYYS Subject 13081 AWVYDVIATLKLVIKSFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYRLRLTPVAALIIMLIYYS 13374
Range 2: 13080 to 13205 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
66.6 bits(139) | 0.0 | 29/42(69%) | 0/42(0%) | Plus/Minus |
Query 196 *KGSNDSIGTYGFNSLIPPGISLLKKAFKIVFTVTTTWYTQA 321 *KGS DSIGTYGF SLIPPG+SLLK F +V T YTQA Subject 13080 *KGSKDSIGTYGFKSLIPPGVSLLKNDFMTSLSVAITSYTQA 13205
Range 3: 13266 to 13373 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
56.5 bits(117) | 0.0 | 28/36(78%) | 0/36(0%) | Plus/Minus |
Query 28 E**IKMIISAATGVNLNLQFSSIRRRTSFSARVGQI 135 E**I +II AATGVNLNL FSSIRRRT+FSA G I Subject 13266 E**ISIIIKAATGVNLNL*FSSIRRRTNFSAISGHI 13373
Range 4: 13081 to 13371 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
70.7 bits(148) | 0.0 | 35/97(36%) | 0/97(0%) | Plus/Minus |
Query 30 VINQNDNQRGYWGQPQPTILLH*TTN*FFSEGGANFTAFTYA*VVTQS*KIRREFMKRVE*FYRHVRFQLFDSPGHFLIEESFQNCFYRDHNVVYPS 320 V+NQ++ +WG P I LH*T + + A + FT ++TQ +I + +K VE YRH+ F +F++PG L+E+ F + R +V+YPS Subject 13081 VVNQHNY*GRHWG*S*PIIFLH*TAHQLLGDLRAYLSPFTCRHLITQPREIG*KLVKGVEGLYRHIWF*VFNTPGCVLVEKRFYDQLERSDHVIYPS 13371
Range 5: 13124 to 13372 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
60.2 bits(125) | 0.0 | 34/83(41%) | 0/83(0%) | Plus/Minus |
Query 29 SNKSK**SARLLGSTSTYNSPPLDDELVFQRGWGKFYCLYLRLSRNSVLKNKTRVHEKGRMILSARTVSTL*FPRAFPY*RKL 277 S+KS * LG TYN PPLD +R G + LYL S NS +N+ + E+GR L A V +L*+PR P *+ + Subject 13124 SSKSA*LLRPPLGLILTYNFPPLDGAPTSRRSPGISFPLYLSSSHNST*RNRMKARERGRRTL*AHMVLSL*YPRVCPC*KTI 13372
Range 6: 13266 to 13373 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
35.4 bits(71) | 0.0 | 15/36(42%) | 0/36(0%) | Minus/Plus |
Query 28 NLPHPR*KTSSSSNGGEL*VEVDPSSRADYHFDLLL 135 ++P R + + SNGG+L*V+++PS + + DLLL Subject 13266 DMPGDRREVGAPSNGGKL*VKINPSGGLNNYADLLL 13373
Range 7: 13083 to 13235 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
35.0 bits(70) | 0.0 | 18/51(35%) | 0/51(0%) | Minus/Plus |
Query 166 LGIPRCGHGKNNFESFLQ*GNARGNQRVETVRADRIIRPFS*TLVLFFKTE 318 LGI R + + + Q G+ RG R++T+ A R++RP S +LF E Subject 13083 LGI*RDRYAQAGHKIVFQQGHTRGY*RLKTICAYRVLRPLSRAFILFL*VE 13235
Range 8: 13082 to 13339 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
49.6 bits(102) | 0.0 | 36/86(42%) | 0/86(0%) | Minus/Plus |
Query 62 LGYTTLWSR*KQF*KLSSIRKCPGESKS*NRTCR*NHSTLFMNSRLIFQD*VTT*A*VKAVKFAPPSLKN*FVV*WRRIVG*G*PQ 319 LGY T R * S R PG K+*N C *+ ST F + I *V * VK ++A S ++ V*WR+I+G* *PQ Subject 13082 LGYMT*SLRSSWS*NRFSTRTHPGVLKT*NHMCL*SPSTPFTSFHPISLG*VMR*RQVKGERYARRSPRSWCAV*WRKIIG*D*PQ 13339
Grapevine leafroll associated virus 3 isolate GP18, complete genome
Sequence ID: EU259806.1 Length: 18498 Number of Matches: 8
Range 1: 13081 to 13374 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
197.6 bits(425) | 0.0 | 78/98(80%) | 0/98(0%) | Minus/Plus |
Query 27 AWVYHVVVTVKTILKAFFNKEMPGGIKELKPYVPIESFDPFHELSSYFSRLSYDLSVGKGSKICPTLAEKLVRRLMEENCRLRLTPVAALIIILIYYS 320 AWVY V+ T+K ++K+FFNK+ PGGIK+LKPYVPIESFDPFHELSSYFSRLSY+++ GKG KICP +AEKLVRRLMEEN RLRLTPVAALII+LIYYS Subject 13081 AWVYDVIATLKLVIKSFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYRLRLTPVAALIIMLIYYS 13374
Range 2: 13080 to 13205 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
66.6 bits(139) | 0.0 | 29/42(69%) | 0/42(0%) | Plus/Minus |
Query 196 *KGSNDSIGTYGFNSLIPPGISLLKKAFKIVFTVTTTWYTQA 321 *KGS DSIGTYGF SLIPPG+SLLK F +V T YTQA Subject 13080 *KGSKDSIGTYGFKSLIPPGVSLLKNDFMTSLSVAITSYTQA 13205
Range 3: 13266 to 13373 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
56.5 bits(117) | 0.0 | 28/36(78%) | 0/36(0%) | Plus/Minus |
Query 28 E**IKMIISAATGVNLNLQFSSIRRRTSFSARVGQI 135 E**I +II AATGVNLNL FSSIRRRT+FSA G I Subject 13266 E**ISIIIKAATGVNLNL*FSSIRRRTNFSAISGHI 13373
Range 4: 13081 to 13371 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
70.7 bits(148) | 0.0 | 35/97(36%) | 0/97(0%) | Plus/Minus |
Query 30 VINQNDNQRGYWGQPQPTILLH*TTN*FFSEGGANFTAFTYA*VVTQS*KIRREFMKRVE*FYRHVRFQLFDSPGHFLIEESFQNCFYRDHNVVYPS 320 V+NQ++ +WG P I LH*T + + A + FT ++TQ +I + +K VE YRH+ F +F++PG L+E+ F + R +V+YPS Subject 13081 VVNQHNY*GRHWG*S*PIIFLH*TAHQLLGDLRAYLSPFTCRHLITQPREIG*KLVKGVEGLYRHIWF*VFNTPGCVLVEKRFYDQLERSDHVIYPS 13371
Range 5: 13124 to 13372 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
60.2 bits(125) | 0.0 | 34/83(41%) | 0/83(0%) | Plus/Minus |
Query 29 SNKSK**SARLLGSTSTYNSPPLDDELVFQRGWGKFYCLYLRLSRNSVLKNKTRVHEKGRMILSARTVSTL*FPRAFPY*RKL 277 S+KS * LG TYN PPLD +R G + LYL S NS +N+ + E+GR L A V +L*+PR P *+ + Subject 13124 SSKSA*LLRPPLGLILTYNFPPLDGAPTSRRSPGISFPLYLSSSHNST*RNRMKARERGRRTL*AHMVLSL*YPRVCPC*KTI 13372
Range 6: 13266 to 13373 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
35.4 bits(71) | 0.0 | 15/36(42%) | 0/36(0%) | Minus/Plus |
Query 28 NLPHPR*KTSSSSNGGEL*VEVDPSSRADYHFDLLL 135 ++P R + + SNGG+L*V+++PS + + DLLL Subject 13266 DMPGDRREVGAPSNGGKL*VKINPSGGLNNYADLLL 13373
Range 7: 13083 to 13235 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
35.0 bits(70) | 0.0 | 18/51(35%) | 0/51(0%) | Minus/Plus |
Query 166 LGIPRCGHGKNNFESFLQ*GNARGNQRVETVRADRIIRPFS*TLVLFFKTE 318 LGI R + + + Q G+ RG R++T+ A R++RP S +LF E Subject 13083 LGI*RDRYAQAGHKIVFQQGHTRGY*RLKTICAYRVLRPLSRAFILFL*VE 13235
Range 8: 13082 to 13339 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
49.6 bits(102) | 0.0 | 36/86(42%) | 0/86(0%) | Minus/Plus |
Query 62 LGYTTLWSR*KQF*KLSSIRKCPGESKS*NRTCR*NHSTLFMNSRLIFQD*VTT*A*VKAVKFAPPSLKN*FVV*WRRIVG*G*PQ 319 LGY T R * S R PG K+*N C *+ ST F + I *V * VK ++A S ++ V*WR+I+G* *PQ Subject 13082 LGYMT*SLRSSWS*NRFSTRTHPGVLKT*NHMCL*SPSTPFTSFHPISLG*VMR*RQVKGERYARRSPRSWCAV*WRKIIG*D*PQ 13339
Grapevine leafroll associated virus 3 isolate TC BR, complete genome
Sequence ID: KX756668.1 Length: 18498 Number of Matches: 8
Range 1: 13081 to 13374 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
197.6 bits(425) | 0.0 | 78/98(80%) | 0/98(0%) | Minus/Plus |
Query 27 AWVYHVVVTVKTILKAFFNKEMPGGIKELKPYVPIESFDPFHELSSYFSRLSYDLSVGKGSKICPTLAEKLVRRLMEENCRLRLTPVAALIIILIYYS 320 AWVY V+ T+K ++K+FFNK+ PGGIK+LKPYVPIESFDPFHELSSYFSRLSY+++ GKG KICP +AEKLVRRLMEEN RLRLTPVAALII+LIYYS Subject 13081 AWVYDVIATLKLVIKSFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYRLRLTPVAALIIMLIYYS 13374
Range 2: 13080 to 13205 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
66.6 bits(139) | 0.0 | 29/42(69%) | 0/42(0%) | Plus/Minus |
Query 196 *KGSNDSIGTYGFNSLIPPGISLLKKAFKIVFTVTTTWYTQA 321 *KGS DSIGTYGF SLIPPG+SLLK F +V T YTQA Subject 13080 *KGSKDSIGTYGFKSLIPPGVSLLKNDFMTSLSVAITSYTQA 13205
Range 3: 13266 to 13373 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
56.5 bits(117) | 0.0 | 28/36(78%) | 0/36(0%) | Plus/Minus |
Query 28 E**IKMIISAATGVNLNLQFSSIRRRTSFSARVGQI 135 E**I +II AATGVNLNL FSSIRRRT+FSA G I Subject 13266 E**ISIIIKAATGVNLNL*FSSIRRRTNFSAISGHI 13373
Range 4: 13081 to 13371 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
70.7 bits(148) | 0.0 | 35/97(36%) | 0/97(0%) | Plus/Minus |
Query 30 VINQNDNQRGYWGQPQPTILLH*TTN*FFSEGGANFTAFTYA*VVTQS*KIRREFMKRVE*FYRHVRFQLFDSPGHFLIEESFQNCFYRDHNVVYPS 320 V+NQ++ +WG P I LH*T + + A + FT ++TQ +I + +K VE YRH+ F +F++PG L+E+ F + R +V+YPS Subject 13081 VVNQHNY*GRHWG*S*PIIFLH*TAHQLLGDLRAYLSPFTCRHLITQPREIG*KLVKGVEGLYRHIWF*VFNTPGCVLVEKRFYDQLERSDHVIYPS 13371
Range 5: 13124 to 13372 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
60.2 bits(125) | 0.0 | 34/83(41%) | 0/83(0%) | Plus/Minus |
Query 29 SNKSK**SARLLGSTSTYNSPPLDDELVFQRGWGKFYCLYLRLSRNSVLKNKTRVHEKGRMILSARTVSTL*FPRAFPY*RKL 277 S+KS * LG TYN PPLD +R G + LYL S NS +N+ + E+GR L A V +L*+PR P *+ + Subject 13124 SSKSA*LLRPPLGLILTYNFPPLDGAPTSRRSPGISFPLYLSSSHNST*RNRMKARERGRRTL*AHMVLSL*YPRVCPC*KTI 13372
Range 6: 13266 to 13373 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
35.4 bits(71) | 0.0 | 15/36(42%) | 0/36(0%) | Minus/Plus |
Query 28 NLPHPR*KTSSSSNGGEL*VEVDPSSRADYHFDLLL 135 ++P R + + SNGG+L*V+++PS + + DLLL Subject 13266 DMPGDRREVGAPSNGGKL*VKINPSGGLNNYADLLL 13373
Range 7: 13083 to 13235 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
35.0 bits(70) | 0.0 | 18/51(35%) | 0/51(0%) | Minus/Plus |
Query 166 LGIPRCGHGKNNFESFLQ*GNARGNQRVETVRADRIIRPFS*TLVLFFKTE 318 LGI R + + + Q G+ RG R++T+ A R++RP S +LF E Subject 13083 LGI*RDRYAQAGHKIVFQQGHTRGY*RLKTICAYRVLRPLSRAFILFL*VE 13235
Range 8: 13082 to 13339 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
49.6 bits(102) | 0.0 | 36/86(42%) | 0/86(0%) | Minus/Plus |
Query 62 LGYTTLWSR*KQF*KLSSIRKCPGESKS*NRTCR*NHSTLFMNSRLIFQD*VTT*A*VKAVKFAPPSLKN*FVV*WRRIVG*G*PQ 319 LGY T R * S R PG K+*N C *+ ST F + I *V * VK ++A S ++ V*WR+I+G* *PQ Subject 13082 LGYMT*SLRSSWS*NRFSTRTHPGVLKT*NHMCL*SPSTPFTSFHPISLG*VMR*RQVKGERYARRSPRSWCAV*WRKIIG*D*PQ 13339
Nucleotide Sequence (786 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
309.4 | 1749.6 | 22% | 4.497e-83 | 50% | HQ130300.1 | |
309.4 | 1749.6 | 22% | 4.497e-83 | 50% | HQ130301.1 | |
309.4 | 1749.6 | 22% | 4.497e-83 | 50% | HQ130303.1 | |
309.4 | 1749.6 | 22% | 4.497e-83 | 50% | HQ130304.1 | |
241.6 | 1748.2 | 61% | 1.434e-93 | 28% | KM058745.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 6 18 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130300.1 Length: 4711 Number of Matches: 10
Range 1: 3534 to 3941 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
309.4 bits(669) | 0.0 | 135/136(99%) | 0/136(0%) | Plus/Minus |
Query 2 NV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQSSL**LHKPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY 409 NV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQSSL**L KPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY Subject 3534 NV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQSSL**LRKPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY 3941
Range 2: 2888 to 2965 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
29.0 bits(57) | 0.0 | 13/26(50%) | 0/26(0%) | Plus/Minus |
Query 390 ILPRQNIQISVFACPSPKNVQKRSAR 467 +L + + ISV ACPSPK V + AR Subject 2888 LLVKTSKNISVSACPSPKYVSR*PAR 2965
Range 3: 3536 to 3940 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
275.1 bits(594) | 0.0 | 135/135(100%) | 0/135(0%) | Minus/Plus |
Query 3 ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEXXXXXXXXXXXXXTELHRTILIDSIDSAFAYDQVGCLVGIARGLLKH 407 ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEVNVVKAYVATTATTELHRTILIDSIDSAFAYDQVGCLVGIARGLLKH Subject 3536 ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEVNVVKAYVATTATTELHRTILIDSIDSAFAYDQVGCLVGIARGLLKH 3940
Range 4: 2889 to 2945 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
29.0 bits(57) | 0.0 | 12/19(63%) | 0/19(0%) | Minus/Plus |
Query 410 RAERF*TFLGDGQANTDIW 466 RA T+LGDGQA+TDI+ Subject 2889 RAGYLETYLGDGQADTDIF 2945
Range 5: 3533 to 3940 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
275.5 bits(595) | 0.0 | 135/136(99%) | 0/136(0%) | Plus/Minus |
Query 3 MFKQTSSYAHQTPHLVISEGGVYTVNENCSMQLSRRCSSYISLHDVNLSLRIVYRCPXXXXXXXXXXXXXXXKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI 410 MFKQTSSYAHQTPHLVISEGGVYTVNENCSMQLSRRCSSY+SLHDVNLSLRIVYRCPARRIINAIIRVNQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI Subject 3533 MFKQTSSYAHQTPHLVISEGGVYTVNENCSMQLSRRCSSYVSLHDVNLSLRIVYRCPARRIINAIIRVNQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI 3940
Range 6: 3535 to 3942 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
265.9 bits(574) | 0.0 | 135/136(99%) | 0/136(0%) | Minus/Plus |
Query 1 YFVWGESRIGVRRFLEASLXXXXXXXXXXTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGLCSYYSDD*AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TF 408 YFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGL SYYSDD*AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TF Subject 3535 YFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGLRSYYSDD*AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TF 3942
Range 7: 3535 to 3792 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
205.4 bits(442) | 0.0 | 86/86(100%) | 0/86(0%) | Plus/Minus |
Query 151 CGSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI 408 CGSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI Subject 3535 CGSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI 3792
Range 8: 3847 to 3942 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.5 bits(165) | 0.0 | 32/32(100%) | 0/32(0%) | Plus/Minus |
Query 1 ECLSKPLAMPTKHPTWS*AKAESILSMRIVLC 96 ECLSKPLAMPTKHPTWS*AKAESILSMRIVLC Subject 3847 ECLSKPLAMPTKHPTWS*AKAESILSMRIVLC 3942
Range 9: 3534 to 3788 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
197.6 bits(425) | 0.0 | 85/85(100%) | 0/85(0%) | Minus/Plus |
Query 155 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQR*TI 409 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQR*TI Subject 3534 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQR*TI 3788
Grapevine leafroll associated virus 3 isolate 6 102 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130301.1 Length: 4711 Number of Matches: 10
Range 1: 3534 to 3941 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
309.4 bits(669) | 0.0 | 135/136(99%) | 0/136(0%) | Plus/Minus |
Query 2 NV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQSSL**LHKPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY 409 NV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQSSL**L KPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY Subject 3534 NV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQSSL**LRKPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY 3941
Range 2: 2888 to 2965 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
29.0 bits(57) | 0.0 | 13/26(50%) | 0/26(0%) | Plus/Minus |
Query 390 ILPRQNIQISVFACPSPKNVQKRSAR 467 +L + + ISV ACPSPK V + AR Subject 2888 LLVKTSKNISVSACPSPKYVSR*PAR 2965
Range 3: 3536 to 3940 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
275.1 bits(594) | 0.0 | 135/135(100%) | 0/135(0%) | Minus/Plus |
Query 3 ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEXXXXXXXXXXXXXTELHRTILIDSIDSAFAYDQVGCLVGIARGLLKH 407 ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEVNVVKAYVATTATTELHRTILIDSIDSAFAYDQVGCLVGIARGLLKH Subject 3536 ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEVNVVKAYVATTATTELHRTILIDSIDSAFAYDQVGCLVGIARGLLKH 3940
Range 4: 2889 to 2945 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
29.0 bits(57) | 0.0 | 12/19(63%) | 0/19(0%) | Minus/Plus |
Query 410 RAERF*TFLGDGQANTDIW 466 RA T+LGDGQA+TDI+ Subject 2889 RAGYLETYLGDGQADTDIF 2945
Range 5: 3533 to 3940 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
275.5 bits(595) | 0.0 | 135/136(99%) | 0/136(0%) | Plus/Minus |
Query 3 MFKQTSSYAHQTPHLVISEGGVYTVNENCSMQLSRRCSSYISLHDVNLSLRIVYRCPXXXXXXXXXXXXXXXKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI 410 MFKQTSSYAHQTPHLVISEGGVYTVNENCSMQLSRRCSSY+SLHDVNLSLRIVYRCPARRIINAIIRVNQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI Subject 3533 MFKQTSSYAHQTPHLVISEGGVYTVNENCSMQLSRRCSSYVSLHDVNLSLRIVYRCPARRIINAIIRVNQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI 3940
Range 6: 3535 to 3942 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
265.9 bits(574) | 0.0 | 135/136(99%) | 0/136(0%) | Minus/Plus |
Query 1 YFVWGESRIGVRRFLEASLXXXXXXXXXXTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGLCSYYSDD*AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TF 408 YFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGL SYYSDD*AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TF Subject 3535 YFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGLRSYYSDD*AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TF 3942
Range 7: 3535 to 3792 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
205.4 bits(442) | 0.0 | 86/86(100%) | 0/86(0%) | Plus/Minus |
Query 151 CGSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI 408 CGSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI Subject 3535 CGSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI 3792
Range 8: 3847 to 3942 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.5 bits(165) | 0.0 | 32/32(100%) | 0/32(0%) | Plus/Minus |
Query 1 ECLSKPLAMPTKHPTWS*AKAESILSMRIVLC 96 ECLSKPLAMPTKHPTWS*AKAESILSMRIVLC Subject 3847 ECLSKPLAMPTKHPTWS*AKAESILSMRIVLC 3942
Range 9: 3534 to 3788 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
197.6 bits(425) | 0.0 | 85/85(100%) | 0/85(0%) | Minus/Plus |
Query 155 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQR*TI 409 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQR*TI Subject 3534 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQR*TI 3788
Grapevine leafroll associated virus 3 isolate 6 114 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130303.1 Length: 4711 Number of Matches: 10
Range 1: 3534 to 3941 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
309.4 bits(669) | 0.0 | 135/136(99%) | 0/136(0%) | Plus/Minus |
Query 2 NV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQSSL**LHKPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY 409 NV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQSSL**L KPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY Subject 3534 NV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQSSL**LRKPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY 3941
Range 2: 2888 to 2965 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
29.0 bits(57) | 0.0 | 13/26(50%) | 0/26(0%) | Plus/Minus |
Query 390 ILPRQNIQISVFACPSPKNVQKRSAR 467 +L + + ISV ACPSPK V + AR Subject 2888 LLVKTSKNISVSACPSPKYVSR*PAR 2965
Range 3: 3536 to 3940 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
275.1 bits(594) | 0.0 | 135/135(100%) | 0/135(0%) | Minus/Plus |
Query 3 ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEXXXXXXXXXXXXXTELHRTILIDSIDSAFAYDQVGCLVGIARGLLKH 407 ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEVNVVKAYVATTATTELHRTILIDSIDSAFAYDQVGCLVGIARGLLKH Subject 3536 ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEVNVVKAYVATTATTELHRTILIDSIDSAFAYDQVGCLVGIARGLLKH 3940
Range 4: 2889 to 2945 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
29.0 bits(57) | 0.0 | 12/19(63%) | 0/19(0%) | Minus/Plus |
Query 410 RAERF*TFLGDGQANTDIW 466 RA T+LGDGQA+TDI+ Subject 2889 RAGYLETYLGDGQADTDIF 2945
Range 5: 3533 to 3940 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
275.5 bits(595) | 0.0 | 135/136(99%) | 0/136(0%) | Plus/Minus |
Query 3 MFKQTSSYAHQTPHLVISEGGVYTVNENCSMQLSRRCSSYISLHDVNLSLRIVYRCPXXXXXXXXXXXXXXXKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI 410 MFKQTSSYAHQTPHLVISEGGVYTVNENCSMQLSRRCSSY+SLHDVNLSLRIVYRCPARRIINAIIRVNQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI Subject 3533 MFKQTSSYAHQTPHLVISEGGVYTVNENCSMQLSRRCSSYVSLHDVNLSLRIVYRCPARRIINAIIRVNQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI 3940
Range 6: 3535 to 3942 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
265.9 bits(574) | 0.0 | 135/136(99%) | 0/136(0%) | Minus/Plus |
Query 1 YFVWGESRIGVRRFLEASLXXXXXXXXXXTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGLCSYYSDD*AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TF 408 YFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGL SYYSDD*AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TF Subject 3535 YFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGLRSYYSDD*AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TF 3942
Range 7: 3535 to 3792 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
205.4 bits(442) | 0.0 | 86/86(100%) | 0/86(0%) | Plus/Minus |
Query 151 CGSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI 408 CGSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI Subject 3535 CGSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI 3792
Range 8: 3847 to 3942 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.5 bits(165) | 0.0 | 32/32(100%) | 0/32(0%) | Plus/Minus |
Query 1 ECLSKPLAMPTKHPTWS*AKAESILSMRIVLC 96 ECLSKPLAMPTKHPTWS*AKAESILSMRIVLC Subject 3847 ECLSKPLAMPTKHPTWS*AKAESILSMRIVLC 3942
Range 9: 3534 to 3788 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
197.6 bits(425) | 0.0 | 85/85(100%) | 0/85(0%) | Minus/Plus |
Query 155 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQR*TI 409 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQR*TI Subject 3534 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQR*TI 3788
Grapevine leafroll associated virus 3 isolate 6 115 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130304.1 Length: 4711 Number of Matches: 10
Range 1: 3534 to 3941 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
309.4 bits(669) | 0.0 | 135/136(99%) | 0/136(0%) | Plus/Minus |
Query 2 NV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQSSL**LHKPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY 409 NV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQSSL**L KPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY Subject 3534 NV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYAAQSSL**LRKPSRR*PQLADRLSLPSASYHQRYYTR*SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY 3941
Range 2: 2888 to 2965 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
29.0 bits(57) | 0.0 | 13/26(50%) | 0/26(0%) | Plus/Minus |
Query 390 ILPRQNIQISVFACPSPKNVQKRSAR 467 +L + + ISV ACPSPK V + AR Subject 2888 LLVKTSKNISVSACPSPKYVSR*PAR 2965
Range 3: 3536 to 3940 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
275.1 bits(594) | 0.0 | 135/135(100%) | 0/135(0%) | Minus/Plus |
Query 3 ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEXXXXXXXXXXXXXTELHRTILIDSIDSAFAYDQVGCLVGIARGLLKH 407 ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEVNVVKAYVATTATTELHRTILIDSIDSAFAYDQVGCLVGIARGLLKH Subject 3536 ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEVNVVKAYVATTATTELHRTILIDSIDSAFAYDQVGCLVGIARGLLKH 3940
Range 4: 2889 to 2945 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
29.0 bits(57) | 0.0 | 12/19(63%) | 0/19(0%) | Minus/Plus |
Query 410 RAERF*TFLGDGQANTDIW 466 RA T+LGDGQA+TDI+ Subject 2889 RAGYLETYLGDGQADTDIF 2945
Range 5: 3533 to 3940 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
275.5 bits(595) | 0.0 | 135/136(99%) | 0/136(0%) | Plus/Minus |
Query 3 MFKQTSSYAHQTPHLVISEGGVYTVNENCSMQLSRRCSSYISLHDVNLSLRIVYRCPXXXXXXXXXXXXXXXKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI 410 MFKQTSSYAHQTPHLVISEGGVYTVNENCSMQLSRRCSSY+SLHDVNLSLRIVYRCPARRIINAIIRVNQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI Subject 3533 MFKQTSSYAHQTPHLVISEGGVYTVNENCSMQLSRRCSSYVSLHDVNLSLRIVYRCPARRIINAIIRVNQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI 3940
Range 6: 3535 to 3942 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
265.9 bits(574) | 0.0 | 135/136(99%) | 0/136(0%) | Minus/Plus |
Query 1 YFVWGESRIGVRRFLEASLXXXXXXXXXXTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGLCSYYSDD*AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TF 408 YFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGL SYYSDD*AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TF Subject 3535 YFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD*RV**R**YDALGSDKRSAS*G*RREGLRSYYSDD*AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TF 3942
Range 7: 3535 to 3792 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
205.4 bits(442) | 0.0 | 86/86(100%) | 0/86(0%) | Plus/Minus |
Query 151 CGSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI 408 CGSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI Subject 3535 CGSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI 3792
Range 8: 3847 to 3942 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.5 bits(165) | 0.0 | 32/32(100%) | 0/32(0%) | Plus/Minus |
Query 1 ECLSKPLAMPTKHPTWS*AKAESILSMRIVLC 96 ECLSKPLAMPTKHPTWS*AKAESILSMRIVLC Subject 3847 ECLSKPLAMPTKHPTWS*AKAESILSMRIVLC 3942
Range 9: 3534 to 3788 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
197.6 bits(425) | 0.0 | 85/85(100%) | 0/85(0%) | Minus/Plus |
Query 155 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQR*TI 409 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQR*TI Subject 3534 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFTF*LTRIIALMIRRAGQR*TI 3788
Grapevine leafroll associated virus 3 isolate GH24, complete genome
Sequence ID: KM058745.1 Length: 18493 Number of Matches: 16
Range 1: 10151 to 10468 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
241.6 bits(521) | 0.0 | 103/106(97%) | 0/106(0%) | Minus/Plus |
Query 453 GFILEEFNLFVFILCNCTGVV*YSRYSFSAPEIFGYVLRAFPYCL*IIF*GVWS*RPFLSDGRG*CASIAYTALSSVK*RVSEFR*QLFGECSAVAMCCGFPC*AF 770 GF L EFNLFVFILCNCTGVV*YSRYSFSAPEIFGYVLRAFPYCL*+IF*GVWS*RPFLSDGRG*CASIAYTALSSVK*RVSEFR*QLFGECSAVAMCCGFPC*AF Subject 10151 GFNL*EFNLFVFILCNCTGVV*YSRYSFSAPEIFGYVLRAFPYCL*VIF*GVWS*RPFLSDGRG*CASIAYTALSSVK*RVSEFR*QLFGECSAVAMCCGFPC*AF 10468
Range 2: 17267 to 17671 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
124.8 bits(266) | 0.0 | 64/135(47%) | 0/135(0%) | Minus/Plus |
Query 3 ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILINAYNSVDDTTRWAAINDPQAEXXXXXXXXXXXXXTELHRTILIDSIDSAFAYDQVGCLVGIARGLLKH 407 +L GE+RG +L L C R GNV+++LL S * MD+S II+QILSA+Y+ND++A+YIL NA+ +V DT + DP EVN +KA+V + T ++++ I++ SIDSAF YD VGC+ IAR L++H Subject 17267 LLIGESRGKSASHALTLTCEPRVAQGNVIEYLLPSLF**VEMDVSSIIMQILSAIYSNDLSAIYILSNAFKNVSDTIGDGVVVDPLNEVNTIKAFVNSFVTKQMYKEIIVQSIDSAFEYDHVGCITHIARCLVRH 17671
Range 3: 16637 to 16675 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
34.1 bits(68) | 0.0 | 13/13(100%) | 0/13(0%) | Minus/Plus |
Query 411 NVFRGRASEYRYL 449 NVFRGRASEYRYL Subject 16637 NVFRGRASEYRYL 16675
Range 4: 10150 to 10467 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
238.9 bits(515) | 0.0 | 103/106(97%) | 0/106(0%) | Plus/Minus |
Query 454 NAQHGNPQHIATALHSPNNC*RNSLTRYLTLESAV*AIEAH*PRPSLRKGL*DHTPQKIIYKQ*GKARSTYPKISGAEKLYLLY*TTPVQLQRIKTNKLNSSKINP 771 NAQHGNPQHIATALHSPNNC*RNSLTRYLTLESAV*AIEAH*PRPSLRKGL*DHTPQKI YKQ*GKARSTYPKISGAEKLYLLY*TTPVQLQRIKTNKLNS K+NP Subject 10150 NAQHGNPQHIATALHSPNNC*RNSLTRYLTLESAV*AIEAH*PRPSLRKGL*DHTPQKITYKQ*GKARSTYPKISGAEKLYLLY*TTPVQLQRIKTNKLNSYKLNP 10467
Range 5: 17308 to 17520 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
50.6 bits(104) | 0.0 | 31/71(44%) | 0/71(0%) | Plus/Minus |
Query 154 GSFIAAQRVVSSTLLYALIKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFK 366 GS +VS T L AL KM* A SLLY AERIC II++ S+ E + TFP L +Q K Subject 17308 GSTTTPSPIVSLTFLKALDKM*IADRSLLYMAERICIIIDETSISTY*NKEGKRYSITFPCATLGSQVRVK 17520
Range 6: 16633 to 16674 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
34.5 bits(69) | 0.0 | 13/14(93%) | 0/14(0%) | Plus/Minus |
Query 412 RYLYSLARPLKTFK 453 RYLYSLARPLKTF+ Subject 16633 RYLYSLARPLKTFR 16674
Range 7: 17599 to 17670 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
32.7 bits(65) | 0.0 | 14/24(58%) | 0/24(0%) | Plus/Minus |
Query 4 CLSKPLAMPTKHPTWS*AKAESIL 75 C +K LAM PTWS + AESIL Subject 17599 CRTKHLAMCVMQPTWSYSNAESIL 17670
Range 8: 10152 to 10469 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
238.0 bits(513) | 0.0 | 104/106(98%) | 0/106(0%) | Minus/Plus |
Query 452 DLFWRNLIYLFLFFVIVQE*FSIVGIVFLLRRFLGMCSGLFLIVYRLFFEEYGLKDLSSVTGAVSALQSLIQRFPALSNELANFANSYLASVVQWRCVADFRAERF 769 DL RNLIYLFLFFVIVQE*FSIVGIVFLLRRFLGMCSGLFLIVYRLFFEEYGLKDLSSVTGAVSALQSLIQRFPALSNELANFANSYLASVVQWRCVADFRAERF Subject 10152 DLICRNLIYLFLFFVIVQE*FSIVGIVFLLRRFLGMCSGLFLIVYRLFFEEYGLKDLSSVTGAVSALQSLIQRFPALSNELANFANSYLASVVQWRCVADFRAERF 10469
Range 9: 16620 to 16676 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
32.7 bits(65) | 0.0 | 14/19(74%) | 0/19(0%) | Minus/Plus |
Query 410 RAERF*TFLGDGQANTDIW 466 RA TFLGDGQANTDI+ Subject 16620 RAGYIETFLGDGQANTDIF 16676
Range 10: 17382 to 17459 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
29.5 bits(58) | 0.0 | 11/26(42%) | 0/26(0%) | Minus/Plus |
Query 215 KASWTYRLLLCRSFPPCTIMT*QHFT 292 K W + L LC+ FPP + Q FT Subject 17382 KWKWMFHL*LCKFFPPYIVTIYQRFT 17459
Range 11: 10151 to 10468 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
208.6 bits(449) | 0.0 | 105/106(99%) | 0/106(0%) | Plus/Minus |
Query 453 KRSARKSATHRHCTTLAK*LLAKFANSLLNAGKRCISD*SALTAPVTEERSLRPYSSKNNL*TIRKSPEHIPKNLRSRKTIPTILNYSCXXXXXXXXXXXFLQNKS 770 KRSARKSATHRHCTTLAK*LLAKFANSLLNAGKRCISD*SALTAPVTEERSLRPYSSKNNL*TIRKSPEHIPKNLRSRKTIPTILNYSCTITKNKNK*IKFLQ KS Subject 10151 KRSARKSATHRHCTTLAK*LLAKFANSLLNAGKRCISD*SALTAPVTEERSLRPYSSKNNL*TIRKSPEHIPKNLRSRKTIPTILNYSCTITKNKNK*IKFLQIKS 10468
Range 12: 16619 to 16675 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
34.1 bits(68) | 0.0 | 14/19(74%) | 0/19(0%) | Plus/Minus |
Query 411 QISVFACPSPKNVQKRSAR 467 +ISVFACPSPKNV AR Subject 16619 KISVFACPSPKNVSM*PAR 16675
Range 13: 17264 to 17443 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
29.5 bits(58) | 0.0 | 17/60(28%) | 0/60(0%) | Plus/Minus |
Query 231 VIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNI 410 ++ + GGK+LHN + +H L ++ * + +V S +A+ Q + + +S L Q I Subject 17264 IVTIYGGKNLHNYR*NIHFHLLEQRR*EIFNHVPLRYSRFASQGQSVASTLASRLTYQQI 17443
Range 14: 10159 to 10467 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
196.7 bits(423) | 0.0 | 101/103(98%) | 0/103(0%) | Minus/Plus |
Query 454 FGGI*FICFXXXXXXXXXLV**V*FFCSGDFWVCAPGFSLLFIDYFLRSMVLKTFPQ*RARLVRFNRLYSAFQR*VTS*RISLTVIWRV*CSGDVLRISVLSV 762 F GI*FICFYSL*LYRSSLV**V*FFCSGDFWVCAPGFSLLFI YFLRSMVLKTFPQ*RARLVRFNRLYSAFQR*VTS*RISLTVIWRV*CSGDVLRISVLSV Subject 10159 FVGI*FICFYSL*LYRSSLV**V*FFCSGDFWVCAPGFSLLFIGYFLRSMVLKTFPQ*RARLVRFNRLYSAFQR*VTS*RISLTVIWRV*CSGDVLRISVLSV 10467
Range 15: 10152 to 10475 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
191.2 bits(411) | 0.0 | 104/108(96%) | 0/108(0%) | Plus/Minus |
Query 446 RSKTLSTEIRNTSPLHYTRQITVSEIR*LVT*RWKALYKRLKRTNRARH*GKVFKTILLKK*SINNKEKPGAHTQKSPEQXXXXXXXXXXXXXXXE*KQIN*IPPK*I 769 +SKTLSTEIRNTSPLHYTRQITVSEIR*LVT*RWKALYKRLKRTNRARH*GKVFKTILLKK* INNKEKPGAHTQKSPEQKNYTYYTKLLLYNYKE*KQIN*IP *I Subject 10152 KSKTLSTEIRNTSPLHYTRQITVSEIR*LVT*RWKALYKRLKRTNRARH*GKVFKTILLKK*PINNKEKPGAHTQKSPEQKNYTYYTKLLLYNYKE*KQIN*IPTN*I 10475
Nucleotide Sequence (429 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
323.6 | 1762.6 | 38% | 8.44e-87 | 95% | NC_004667.1 | |
323.6 | 1762.6 | 38% | 8.44e-87 | 95% | AF037268.2 | |
323.6 | 1770.8 | 38% | 8.44e-87 | 95% | GQ352632.1 | |
323.6 | 1770.8 | 38% | 8.44e-87 | 95% | KX756668.1 | |
323.6 | 1760.7 | 38% | 8.44e-87 | 95% | KX701860.1 |
Alignments
Grapevine leafroll associated virus 3, complete genome
Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 8
Range 1: 2079 to 2483 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
323.6 bits(700) | 0.0 | 133/135(99%) | 0/135(0%) | Plus/Plus |
Query 2 KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTYRSLVPSFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAVKPQ 406 KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTYRSLVPSFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAV+ Q Subject 2079 KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTYRSLVPSFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAVRSQ 2483
Range 2: 2078 to 2482 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
304.4 bits(658) | 0.0 | 134/135(99%) | 0/135(0%) | Minus/Minus |
Query 1 CGLTAPTAYSNVLFSNVPIVLSA*E*ILSTKSESRTIVLKDTLEPATTGMNTSDLPTNDGTNDLYVTSVPGDF*ALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF 405 C LTAPTAYSNVLFSNVPIVLSA*E*ILSTKSESRTIVLKDTLEPATTGMNTSDLPTNDGTNDLYVTSVPGDF*ALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF Subject 2078 CDLTAPTAYSNVLFSNVPIVLSA*E*ILSTKSESRTIVLKDTLEPATTGMNTSDLPTNDGTNDLYVTSVPGDF*ALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF 2482
Range 3: 2080 to 2484 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
301.2 bits(651) | 0.0 | 131/135(97%) | 0/135(0%) | Plus/Plus |
Query 3 RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLMYALRPGTCLS*SMRDTVVVTIISLCVELRSHLELRLRIGRWSRRSWANRWCSYLL*LVLVCPLRQ*SSIRTLSTGSIPTRSIL*EHSRIERLSMPLGRSNRK 407 RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLMYALRPGTCLS*SMRDTVVVTIISLCV LRSHLELRLRIGRWSRRSWANRWCSYLL*LVLVCPLRQ*SSIRTLSTGSIPTRS L* HSRIERLSMPLGRS RK Subject 2080 RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLMYALRPGTCLS*SMRDTVVVTIISLCVGLRSHLELRLRIGRWSRRSWANRWCSYLL*LVLVCPLRQ*SSIRTLSTGSIPTRSTL*GHSRIERLSMPLGRSGRK 2484
Range 4: 2079 to 2483 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
290.7 bits(628) | 0.0 | 131/135(97%) | 0/135(0%) | Minus/Minus |
Query 2 LRFDRPNGILKRSILECSYSIERVGIDPVDKVRIEDYCLKGHTRTSYNRYEHQRFAHERRDQRPIRNXXXXXXXXSTHSEMMVTTTVSLIL*LKHVPGRSAYIRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL 406 LR DRPNGILKRSILEC YS+ERVGIDPVDKVRIEDYCLKGHTRTSYNRYEHQRFAHERRDQRPIRNLSSR*LLS THSEMMVTTTVSLIL*LKHVPGRSAYIRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL Subject 2079 LRPDRPNGILKRSILECPYSVERVGIDPVDKVRIEDYCLKGHTRTSYNRYEHQRFAHERRDQRPIRNLSSR*LLSPTHSEMMVTTTVSLIL*LKHVPGRSAYIRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL 2483
Range 5: 2078 to 2278 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
157.8 bits(338) | 0.0 | 66/67(99%) | 0/67(0%) | Plus/Plus |
Query 1 EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLCTHFVRERV*ARV*GIPLWLPSSHYV*SSEVTWN 201 EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLCTHFVRERV*ARV*GIPLWLPSSHYV* SEVTWN Subject 2078 EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLCTHFVRERV*ARV*GIPLWLPSSHYV*GSEVTWN 2278
Range 6: 2318 to 2485 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
134.4 bits(287) | 0.0 | 53/56(95%) | 0/56(0%) | Plus/Plus |
Query 241 QIAGVHTCCSWF*CVL*DNSPRFGLCRQDLFLRAQYYRNIRE*NV*VCRWGGQTAK 408 QIAGVHTCCSWF*CVL*DNSPRFGLCRQDLFLRAQ+YR+IRE*NV*VCRWGGQ AK Subject 2318 QIAGVHTCCSWF*CVL*DNSPRFGLCRQDLFLRAQHYRDIRE*NV*VCRWGGQVAK 2485
Range 7: 2176 to 2484 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
191.2 bits(411) | 0.0 | 99/103(96%) | 0/103(0%) | Minus/Minus |
Query 99 FAV*PPQRHTQTFYSRMFL*Y*ARRNRSCRQSPNRGLLS*RTH*NQLQQV*TPAICXXXXXXXXXXXPQFQVTSELYT**DDGNHNGIPHTLA*TRSRTKCVH 407 FA *PPQRHTQTFYSRM L* *ARRNRSCRQSPNRGLLS*RTH*NQLQQV*TPAICPRTTGPTTYT*PQFQVTSE YT**DDGNHNGIPHTLA*TRSRTKCVH Subject 2176 FAT*PPQRHTQTFYSRMSL*C*ARRNRSCRQSPNRGLLS*RTH*NQLQQV*TPAICPRTTGPTTYT*PQFQVTSEPYT**DDGNHNGIPHTLA*TRSRTKCVH 2484
Grapevine leafroll associated virus 3, complete genome
Sequence ID: AF037268.2 Length: 17919 Number of Matches: 8
Range 1: 2079 to 2483 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
323.6 bits(700) | 0.0 | 133/135(99%) | 0/135(0%) | Plus/Plus |
Query 2 KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTYRSLVPSFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAVKPQ 406 KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTYRSLVPSFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAV+ Q Subject 2079 KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTYRSLVPSFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAVRSQ 2483
Range 2: 2078 to 2482 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
304.4 bits(658) | 0.0 | 134/135(99%) | 0/135(0%) | Minus/Minus |
Query 1 CGLTAPTAYSNVLFSNVPIVLSA*E*ILSTKSESRTIVLKDTLEPATTGMNTSDLPTNDGTNDLYVTSVPGDF*ALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF 405 C LTAPTAYSNVLFSNVPIVLSA*E*ILSTKSESRTIVLKDTLEPATTGMNTSDLPTNDGTNDLYVTSVPGDF*ALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF Subject 2078 CDLTAPTAYSNVLFSNVPIVLSA*E*ILSTKSESRTIVLKDTLEPATTGMNTSDLPTNDGTNDLYVTSVPGDF*ALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF 2482
Range 3: 2080 to 2484 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
301.2 bits(651) | 0.0 | 131/135(97%) | 0/135(0%) | Plus/Plus |
Query 3 RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLMYALRPGTCLS*SMRDTVVVTIISLCVELRSHLELRLRIGRWSRRSWANRWCSYLL*LVLVCPLRQ*SSIRTLSTGSIPTRSIL*EHSRIERLSMPLGRSNRK 407 RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLMYALRPGTCLS*SMRDTVVVTIISLCV LRSHLELRLRIGRWSRRSWANRWCSYLL*LVLVCPLRQ*SSIRTLSTGSIPTRS L* HSRIERLSMPLGRS RK Subject 2080 RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLMYALRPGTCLS*SMRDTVVVTIISLCVGLRSHLELRLRIGRWSRRSWANRWCSYLL*LVLVCPLRQ*SSIRTLSTGSIPTRSTL*GHSRIERLSMPLGRSGRK 2484
Range 4: 2079 to 2483 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
290.7 bits(628) | 0.0 | 131/135(97%) | 0/135(0%) | Minus/Minus |
Query 2 LRFDRPNGILKRSILECSYSIERVGIDPVDKVRIEDYCLKGHTRTSYNRYEHQRFAHERRDQRPIRNXXXXXXXXSTHSEMMVTTTVSLIL*LKHVPGRSAYIRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL 406 LR DRPNGILKRSILEC YS+ERVGIDPVDKVRIEDYCLKGHTRTSYNRYEHQRFAHERRDQRPIRNLSSR*LLS THSEMMVTTTVSLIL*LKHVPGRSAYIRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL Subject 2079 LRPDRPNGILKRSILECPYSVERVGIDPVDKVRIEDYCLKGHTRTSYNRYEHQRFAHERRDQRPIRNLSSR*LLSPTHSEMMVTTTVSLIL*LKHVPGRSAYIRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL 2483
Range 5: 2078 to 2278 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
157.8 bits(338) | 0.0 | 66/67(99%) | 0/67(0%) | Plus/Plus |
Query 1 EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLCTHFVRERV*ARV*GIPLWLPSSHYV*SSEVTWN 201 EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLCTHFVRERV*ARV*GIPLWLPSSHYV* SEVTWN Subject 2078 EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLCTHFVRERV*ARV*GIPLWLPSSHYV*GSEVTWN 2278
Range 6: 2318 to 2485 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
134.4 bits(287) | 0.0 | 53/56(95%) | 0/56(0%) | Plus/Plus |
Query 241 QIAGVHTCCSWF*CVL*DNSPRFGLCRQDLFLRAQYYRNIRE*NV*VCRWGGQTAK 408 QIAGVHTCCSWF*CVL*DNSPRFGLCRQDLFLRAQ+YR+IRE*NV*VCRWGGQ AK Subject 2318 QIAGVHTCCSWF*CVL*DNSPRFGLCRQDLFLRAQHYRDIRE*NV*VCRWGGQVAK 2485
Range 7: 2176 to 2484 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
191.2 bits(411) | 0.0 | 99/103(96%) | 0/103(0%) | Minus/Minus |
Query 99 FAV*PPQRHTQTFYSRMFL*Y*ARRNRSCRQSPNRGLLS*RTH*NQLQQV*TPAICXXXXXXXXXXXPQFQVTSELYT**DDGNHNGIPHTLA*TRSRTKCVH 407 FA *PPQRHTQTFYSRM L* *ARRNRSCRQSPNRGLLS*RTH*NQLQQV*TPAICPRTTGPTTYT*PQFQVTSE YT**DDGNHNGIPHTLA*TRSRTKCVH Subject 2176 FAT*PPQRHTQTFYSRMSL*C*ARRNRSCRQSPNRGLLS*RTH*NQLQQV*TPAICPRTTGPTTYT*PQFQVTSEPYT**DDGNHNGIPHTLA*TRSRTKCVH 2484
Grapevine leafroll associated virus 3 isolate 623, complete genome
Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 8
Range 1: 2658 to 3062 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
323.6 bits(700) | 0.0 | 133/135(99%) | 0/135(0%) | Plus/Plus |
Query 2 KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTYRSLVPSFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAVKPQ 406 KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTYRSLVPSFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAV+ Q Subject 2658 KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTYRSLVPSFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAVRSQ 3062
Range 2: 2657 to 3061 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
304.4 bits(658) | 0.0 | 134/135(99%) | 0/135(0%) | Minus/Minus |
Query 1 CGLTAPTAYSNVLFSNVPIVLSA*E*ILSTKSESRTIVLKDTLEPATTGMNTSDLPTNDGTNDLYVTSVPGDF*ALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF 405 C LTAPTAYSNVLFSNVPIVLSA*E*ILSTKSESRTIVLKDTLEPATTGMNTSDLPTNDGTNDLYVTSVPGDF*ALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF Subject 2657 CDLTAPTAYSNVLFSNVPIVLSA*E*ILSTKSESRTIVLKDTLEPATTGMNTSDLPTNDGTNDLYVTSVPGDF*ALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF 3061
Range 3: 2659 to 3063 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
304.4 bits(658) | 0.0 | 132/135(98%) | 0/135(0%) | Plus/Plus |
Query 3 RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLMYALRPGTCLS*SMRDTVVVTIISLCVELRSHLELRLRIGRWSRRSWANRWCSYLL*LVLVCPLRQ*SSIRTLSTGSIPTRSIL*EHSRIERLSMPLGRSNRK 407 RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLMYALRPGTCLS*SMRDTVVVTIISLCVELRSHLELRLRIGRWSRRSWANRWCSYLL*LVLVCPLRQ*SSIRTLSTGSIPTRS L* HSRIERLSMPLGRS RK Subject 2659 RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLMYALRPGTCLS*SMRDTVVVTIISLCVELRSHLELRLRIGRWSRRSWANRWCSYLL*LVLVCPLRQ*SSIRTLSTGSIPTRSTL*GHSRIERLSMPLGRSGRK 3063
Range 4: 2658 to 3062 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
290.7 bits(628) | 0.0 | 132/135(98%) | 0/135(0%) | Minus/Minus |
Query 2 LRFDRPNGILKRSILECSYSIERVGIDPVDKVRIEDYCLKGHTRTSYNRYEHQRFAHERRDQRPIRNXXXXXXXXSTHSEMMVTTTVSLIL*LKHVPGRSAYIRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL 406 LR DRPNGILKRSILEC YS+ERVGIDPVDKVRIEDYCLKGHTRTSYNRYEHQRFAHERRDQRPIRNLSSR*LLSSTHSEMMVTTTVSLIL*LKHVPGRSAYIRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL Subject 2658 LRPDRPNGILKRSILECPYSVERVGIDPVDKVRIEDYCLKGHTRTSYNRYEHQRFAHERRDQRPIRNLSSR*LLSSTHSEMMVTTTVSLIL*LKHVPGRSAYIRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL 3062
Range 5: 2657 to 2857 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
159.6 bits(342) | 0.0 | 67/67(100%) | 0/67(0%) | Plus/Plus |
Query 1 EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLCTHFVRERV*ARV*GIPLWLPSSHYV*SSEVTWN 201 EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLCTHFVRERV*ARV*GIPLWLPSSHYV*SSEVTWN Subject 2657 EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLCTHFVRERV*ARV*GIPLWLPSSHYV*SSEVTWN 2857
Range 6: 2897 to 3064 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
134.4 bits(287) | 0.0 | 53/56(95%) | 0/56(0%) | Plus/Plus |
Query 241 QIAGVHTCCSWF*CVL*DNSPRFGLCRQDLFLRAQYYRNIRE*NV*VCRWGGQTAK 408 QIAGVHTCCSWF*CVL*DNSPRFGLCRQDLFLRAQ+YR+IRE*NV*VCRWGGQ AK Subject 2897 QIAGVHTCCSWF*CVL*DNSPRFGLCRQDLFLRAQHYRDIRE*NV*VCRWGGQVAK 3064
Range 7: 2755 to 3063 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.4 bits(418) | 0.0 | 100/103(97%) | 0/103(0%) | Minus/Minus |
Query 99 FAV*PPQRHTQTFYSRMFL*Y*ARRNRSCRQSPNRGLLS*RTH*NQLQQV*TPAICXXXXXXXXXXXPQFQVTSELYT**DDGNHNGIPHTLA*TRSRTKCVH 407 FA *PPQRHTQTFYSRM L* *ARRNRSCRQSPNRGLLS*RTH*NQLQQV*TPAICPRTTGPTTYT*PQFQVTSELYT**DDGNHNGIPHTLA*TRSRTKCVH Subject 2755 FAT*PPQRHTQTFYSRMSL*C*ARRNRSCRQSPNRGLLS*RTH*NQLQQV*TPAICPRTTGPTTYT*PQFQVTSELYT**DDGNHNGIPHTLA*TRSRTKCVH 3063
Grapevine leafroll associated virus 3 isolate TC BR, complete genome
Sequence ID: KX756668.1 Length: 18498 Number of Matches: 8
Range 1: 2658 to 3062 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
323.6 bits(700) | 0.0 | 133/135(99%) | 0/135(0%) | Plus/Plus |
Query 2 KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTYRSLVPSFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAVKPQ 406 KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTYRSLVPSFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAV+ Q Subject 2658 KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTYRSLVPSFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAVRSQ 3062
Range 2: 2657 to 3061 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
304.4 bits(658) | 0.0 | 134/135(99%) | 0/135(0%) | Minus/Minus |
Query 1 CGLTAPTAYSNVLFSNVPIVLSA*E*ILSTKSESRTIVLKDTLEPATTGMNTSDLPTNDGTNDLYVTSVPGDF*ALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF 405 C LTAPTAYSNVLFSNVPIVLSA*E*ILSTKSESRTIVLKDTLEPATTGMNTSDLPTNDGTNDLYVTSVPGDF*ALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF Subject 2657 CDLTAPTAYSNVLFSNVPIVLSA*E*ILSTKSESRTIVLKDTLEPATTGMNTSDLPTNDGTNDLYVTSVPGDF*ALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF 3061
Range 3: 2659 to 3063 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
304.4 bits(658) | 0.0 | 132/135(98%) | 0/135(0%) | Plus/Plus |
Query 3 RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLMYALRPGTCLS*SMRDTVVVTIISLCVELRSHLELRLRIGRWSRRSWANRWCSYLL*LVLVCPLRQ*SSIRTLSTGSIPTRSIL*EHSRIERLSMPLGRSNRK 407 RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLMYALRPGTCLS*SMRDTVVVTIISLCVELRSHLELRLRIGRWSRRSWANRWCSYLL*LVLVCPLRQ*SSIRTLSTGSIPTRS L* HSRIERLSMPLGRS RK Subject 2659 RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLMYALRPGTCLS*SMRDTVVVTIISLCVELRSHLELRLRIGRWSRRSWANRWCSYLL*LVLVCPLRQ*SSIRTLSTGSIPTRSTL*GHSRIERLSMPLGRSGRK 3063
Range 4: 2658 to 3062 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
290.7 bits(628) | 0.0 | 132/135(98%) | 0/135(0%) | Minus/Minus |
Query 2 LRFDRPNGILKRSILECSYSIERVGIDPVDKVRIEDYCLKGHTRTSYNRYEHQRFAHERRDQRPIRNXXXXXXXXSTHSEMMVTTTVSLIL*LKHVPGRSAYIRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL 406 LR DRPNGILKRSILEC YS+ERVGIDPVDKVRIEDYCLKGHTRTSYNRYEHQRFAHERRDQRPIRNLSSR*LLSSTHSEMMVTTTVSLIL*LKHVPGRSAYIRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL Subject 2658 LRPDRPNGILKRSILECPYSVERVGIDPVDKVRIEDYCLKGHTRTSYNRYEHQRFAHERRDQRPIRNLSSR*LLSSTHSEMMVTTTVSLIL*LKHVPGRSAYIRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL 3062
Range 5: 2657 to 2857 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
159.6 bits(342) | 0.0 | 67/67(100%) | 0/67(0%) | Plus/Plus |
Query 1 EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLCTHFVRERV*ARV*GIPLWLPSSHYV*SSEVTWN 201 EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLCTHFVRERV*ARV*GIPLWLPSSHYV*SSEVTWN Subject 2657 EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLCTHFVRERV*ARV*GIPLWLPSSHYV*SSEVTWN 2857
Range 6: 2897 to 3064 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
134.4 bits(287) | 0.0 | 53/56(95%) | 0/56(0%) | Plus/Plus |
Query 241 QIAGVHTCCSWF*CVL*DNSPRFGLCRQDLFLRAQYYRNIRE*NV*VCRWGGQTAK 408 QIAGVHTCCSWF*CVL*DNSPRFGLCRQDLFLRAQ+YR+IRE*NV*VCRWGGQ AK Subject 2897 QIAGVHTCCSWF*CVL*DNSPRFGLCRQDLFLRAQHYRDIRE*NV*VCRWGGQVAK 3064
Range 7: 2755 to 3063 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.4 bits(418) | 0.0 | 100/103(97%) | 0/103(0%) | Minus/Minus |
Query 99 FAV*PPQRHTQTFYSRMFL*Y*ARRNRSCRQSPNRGLLS*RTH*NQLQQV*TPAICXXXXXXXXXXXPQFQVTSELYT**DDGNHNGIPHTLA*TRSRTKCVH 407 FA *PPQRHTQTFYSRM L* *ARRNRSCRQSPNRGLLS*RTH*NQLQQV*TPAICPRTTGPTTYT*PQFQVTSELYT**DDGNHNGIPHTLA*TRSRTKCVH Subject 2755 FAT*PPQRHTQTFYSRMSL*C*ARRNRSCRQSPNRGLLS*RTH*NQLQQV*TPAICPRTTGPTTYT*PQFQVTSELYT**DDGNHNGIPHTLA*TRSRTKCVH 3063
Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome
Sequence ID: KX701860.1 Length: 18020 Number of Matches: 8
Range 1: 2176 to 2580 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
323.6 bits(700) | 0.0 | 133/135(99%) | 0/135(0%) | Plus/Plus |
Query 2 KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTYRSLVPSFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAVKPQ 406 KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTYRSLVPSFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAV+ Q Subject 2176 KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTYRSLVPSFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAVRSQ 2580
Range 2: 2175 to 2579 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
304.4 bits(658) | 0.0 | 134/135(99%) | 0/135(0%) | Minus/Minus |
Query 1 CGLTAPTAYSNVLFSNVPIVLSA*E*ILSTKSESRTIVLKDTLEPATTGMNTSDLPTNDGTNDLYVTSVPGDF*ALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF 405 C LTAPTAYSNVLFSNVPIVLSA*E*ILSTKSESRTIVLKDTLEPATTGMNTSDLPTNDGTNDLYVTSVPGDF*ALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF Subject 2175 CDLTAPTAYSNVLFSNVPIVLSA*E*ILSTKSESRTIVLKDTLEPATTGMNTSDLPTNDGTNDLYVTSVPGDF*ALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF 2579
Range 3: 2177 to 2581 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
302.6 bits(654) | 0.0 | 131/135(97%) | 0/135(0%) | Plus/Plus |
Query 3 RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLMYALRPGTCLS*SMRDTVVVTIISLCVELRSHLELRLRIGRWSRRSWANRWCSYLL*LVLVCPLRQ*SSIRTLSTGSIPTRSIL*EHSRIERLSMPLGRSNRK 407 RGKVITWPTMLVSV RCMNIPSLT*AGFSPFLMYALRPGTCLS*SMRDTVVVTIISLCVELRSHLELRLRIGRWSRRSWANRWCSYLL*LVLVCPLRQ*SSIRTLSTGSIPTRS L* HSRIERLSMPLGRS RK Subject 2177 RGKVITWPTMLVSVARCMNIPSLT*AGFSPFLMYALRPGTCLS*SMRDTVVVTIISLCVELRSHLELRLRIGRWSRRSWANRWCSYLL*LVLVCPLRQ*SSIRTLSTGSIPTRSTL*GHSRIERLSMPLGRSGRK 2581
Range 4: 2176 to 2580 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
288.4 bits(623) | 0.0 | 131/135(97%) | 0/135(0%) | Minus/Minus |
Query 2 LRFDRPNGILKRSILECSYSIERVGIDPVDKVRIEDYCLKGHTRTSYNRYEHQRFAHERRDQRPIRNXXXXXXXXSTHSEMMVTTTVSLIL*LKHVPGRSAYIRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL 406 LR DRPNGILKRSILEC YS+ERVGIDPVDKVRIEDYCLKGHTRTSYNRYEHQRFAHERRDQRPIRNLSSR*LLSSTHSEMMVTTTVSLIL*LKHVPGRSAYIRKGEKPAYVREGMFIHL TLTNIVGQVITFPL Subject 2176 LRPDRPNGILKRSILECPYSVERVGIDPVDKVRIEDYCLKGHTRTSYNRYEHQRFAHERRDQRPIRNLSSR*LLSSTHSEMMVTTTVSLIL*LKHVPGRSAYIRKGEKPAYVREGMFIHLATLTNIVGQVITFPL 2580
Range 5: 2175 to 2375 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
157.3 bits(337) | 0.0 | 66/67(99%) | 0/67(0%) | Plus/Plus |
Query 1 EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLCTHFVRERV*ARV*GIPLWLPSSHYV*SSEVTWN 201 EEGR*LPGLQCWSVW DV*TFLL*RKRVFHLFLCTHFVRERV*ARV*GIPLWLPSSHYV*SSEVTWN Subject 2175 EEGR*LPGLQCWSVWRDV*TFLL*RKRVFHLFLCTHFVRERV*ARV*GIPLWLPSSHYV*SSEVTWN 2375
Range 6: 2415 to 2582 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
134.4 bits(287) | 0.0 | 53/56(95%) | 0/56(0%) | Plus/Plus |
Query 241 QIAGVHTCCSWF*CVL*DNSPRFGLCRQDLFLRAQYYRNIRE*NV*VCRWGGQTAK 408 QIAGVHTCCSWF*CVL*DNSPRFGLCRQDLFLRAQ+YR+IRE*NV*VCRWGGQ AK Subject 2415 QIAGVHTCCSWF*CVL*DNSPRFGLCRQDLFLRAQHYRDIRE*NV*VCRWGGQVAK 2582
Range 7: 2273 to 2581 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.4 bits(418) | 0.0 | 100/103(97%) | 0/103(0%) | Minus/Minus |
Query 99 FAV*PPQRHTQTFYSRMFL*Y*ARRNRSCRQSPNRGLLS*RTH*NQLQQV*TPAICXXXXXXXXXXXPQFQVTSELYT**DDGNHNGIPHTLA*TRSRTKCVH 407 FA *PPQRHTQTFYSRM L* *ARRNRSCRQSPNRGLLS*RTH*NQLQQV*TPAICPRTTGPTTYT*PQFQVTSELYT**DDGNHNGIPHTLA*TRSRTKCVH Subject 2273 FAT*PPQRHTQTFYSRMSL*C*ARRNRSCRQSPNRGLLS*RTH*NQLQQV*TPAICPRTTGPTTYT*PQFQVTSELYT**DDGNHNGIPHTLA*TRSRTKCVH 2581
Nucleotide Sequence (101 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
92.3 | 477.4 | 33% | 3.681e-18 | 97% | JX559645.1 | |
92.3 | 477.4 | 33% | 3.681e-18 | 97% | GQ352631.1 | |
92.3 | 477.4 | 33% | 3.681e-18 | 97% | GU983863.1 | |
92.3 | 477.4 | 33% | 3.681e-18 | 97% | KX756669.1 | |
91.3 | 463.2 | 33% | 6.948e-18 | 94% | EU344893.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 6
Range 1: 7182 to 7280 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
92.3 bits(195) | 0.0 | 33/33(100%) | 0/33(0%) | Minus/Minus |
Query 2 LFSE*GVIGLLRPKQYHITECFSLCFMHCHHWC 100 LFSE*GVIGLLRPKQYHITECFSLCFMHCHHWC Subject 7182 LFSE*GVIGLLRPKQYHITECFSLCFMHCHHWC 7280
Range 2: 7183 to 7281 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
85.8 bits(181) | 0.0 | 32/33(97%) | 0/33(0%) | Plus/Plus |
Query 3 HQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNS 101 HQ**QCMKHREKHSVMWYCLGRRRPMTPYSLN+ Subject 7183 HQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNN 7281
Range 3: 7184 to 7279 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.9 bits(168) | 0.0 | 32/32(100%) | 0/32(0%) | Minus/Minus |
Query 4 CLVNRESSAFFVLNNTTSLNVFPCASCTVITG 99 CLVNRESSAFFVLNNTTSLNVFPCASCTVITG Subject 7184 CLVNRESSAFFVLNNTTSLNVFPCASCTVITG 7279
Range 4: 7185 to 7280 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
77.1 bits(162) | 0.0 | 32/32(100%) | 0/32(0%) | Plus/Plus |
Query 5 PVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQ 100 PVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQ Subject 7185 PVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQ 7280
Grapevine leafroll associated virus 3 isolate 621, complete genome
Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 6
Range 1: 7182 to 7280 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
92.3 bits(195) | 0.0 | 33/33(100%) | 0/33(0%) | Minus/Minus |
Query 2 LFSE*GVIGLLRPKQYHITECFSLCFMHCHHWC 100 LFSE*GVIGLLRPKQYHITECFSLCFMHCHHWC Subject 7182 LFSE*GVIGLLRPKQYHITECFSLCFMHCHHWC 7280
Range 2: 7183 to 7281 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
85.8 bits(181) | 0.0 | 32/33(97%) | 0/33(0%) | Plus/Plus |
Query 3 HQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNS 101 HQ**QCMKHREKHSVMWYCLGRRRPMTPYSLN+ Subject 7183 HQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNN 7281
Range 3: 7184 to 7279 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.9 bits(168) | 0.0 | 32/32(100%) | 0/32(0%) | Minus/Minus |
Query 4 CLVNRESSAFFVLNNTTSLNVFPCASCTVITG 99 CLVNRESSAFFVLNNTTSLNVFPCASCTVITG Subject 7184 CLVNRESSAFFVLNNTTSLNVFPCASCTVITG 7279
Range 4: 7185 to 7280 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
77.1 bits(162) | 0.0 | 32/32(100%) | 0/32(0%) | Plus/Plus |
Query 5 PVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQ 100 PVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQ Subject 7185 PVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQ 7280
Grapevine leafroll associated virus 3 isolate WA MR, complete genome
Sequence ID: GU983863.1 Length: 18498 Number of Matches: 6
Range 1: 7182 to 7280 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
92.3 bits(195) | 0.0 | 33/33(100%) | 0/33(0%) | Minus/Minus |
Query 2 LFSE*GVIGLLRPKQYHITECFSLCFMHCHHWC 100 LFSE*GVIGLLRPKQYHITECFSLCFMHCHHWC Subject 7182 LFSE*GVIGLLRPKQYHITECFSLCFMHCHHWC 7280
Range 2: 7183 to 7281 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
85.8 bits(181) | 0.0 | 32/33(97%) | 0/33(0%) | Plus/Plus |
Query 3 HQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNS 101 HQ**QCMKHREKHSVMWYCLGRRRPMTPYSLN+ Subject 7183 HQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNN 7281
Range 3: 7184 to 7279 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.9 bits(168) | 0.0 | 32/32(100%) | 0/32(0%) | Minus/Minus |
Query 4 CLVNRESSAFFVLNNTTSLNVFPCASCTVITG 99 CLVNRESSAFFVLNNTTSLNVFPCASCTVITG Subject 7184 CLVNRESSAFFVLNNTTSLNVFPCASCTVITG 7279
Range 4: 7185 to 7280 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
77.1 bits(162) | 0.0 | 32/32(100%) | 0/32(0%) | Plus/Plus |
Query 5 PVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQ 100 PVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQ Subject 7185 PVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQ 7280
Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome
Sequence ID: KX756669.1 Length: 18313 Number of Matches: 6
Range 1: 6997 to 7095 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
92.3 bits(195) | 0.0 | 33/33(100%) | 0/33(0%) | Minus/Minus |
Query 2 LFSE*GVIGLLRPKQYHITECFSLCFMHCHHWC 100 LFSE*GVIGLLRPKQYHITECFSLCFMHCHHWC Subject 6997 LFSE*GVIGLLRPKQYHITECFSLCFMHCHHWC 7095
Range 2: 6998 to 7096 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
85.8 bits(181) | 0.0 | 32/33(97%) | 0/33(0%) | Plus/Plus |
Query 3 HQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNS 101 HQ**QCMKHREKHSVMWYCLGRRRPMTPYSLN+ Subject 6998 HQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNN 7096
Range 3: 6999 to 7094 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.9 bits(168) | 0.0 | 32/32(100%) | 0/32(0%) | Minus/Minus |
Query 4 CLVNRESSAFFVLNNTTSLNVFPCASCTVITG 99 CLVNRESSAFFVLNNTTSLNVFPCASCTVITG Subject 6999 CLVNRESSAFFVLNNTTSLNVFPCASCTVITG 7094
Range 4: 7000 to 7095 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
77.1 bits(162) | 0.0 | 32/32(100%) | 0/32(0%) | Plus/Plus |
Query 5 PVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQ 100 PVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQ Subject 7000 PVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQ 7095
Grapevine leafroll associated virus 3 isolate Cl 766, complete genome
Sequence ID: EU344893.1 Length: 17919 Number of Matches: 6
Range 1: 6603 to 6701 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
91.3 bits(193) | 0.0 | 32/33(97%) | 0/33(0%) | Minus/Minus |
Query 2 LFSE*GVIGLLRPKQYHITECFSLCFMHCHHWC 100 LFSE*GVIG+LRPKQYHITECFSLCFMHCHHWC Subject 6603 LFSE*GVIGILRPKQYHITECFSLCFMHCHHWC 6701
Range 2: 6604 to 6702 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
83.1 bits(175) | 0.0 | 31/33(94%) | 0/33(0%) | Plus/Plus |
Query 3 HQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNS 101 HQ**QCMKHREKHSVMWYCLGRR PMTPYSLN+ Subject 6604 HQ**QCMKHREKHSVMWYCLGRRMPMTPYSLNN 6702
Range 3: 6605 to 6700 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.9 bits(168) | 0.0 | 32/32(100%) | 0/32(0%) | Minus/Minus |
Query 4 CLVNRESSAFFVLNNTTSLNVFPCASCTVITG 99 CLVNRESSAFFVLNNTTSLNVFPCASCTVITG Subject 6605 CLVNRESSAFFVLNNTTSLNVFPCASCTVITG 6700
Range 4: 6606 to 6701 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
74.8 bits(157) | 0.0 | 31/32(97%) | 0/32(0%) | Plus/Plus |
Query 5 PVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQ 100 PVMTVHEAQGKTFSDVVLFRTK ADDSLFTKQ Subject 6606 PVMTVHEAQGKTFSDVVLFRTKNADDSLFTKQ 6701
Nucleotide Sequence (315 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
245.3 | 1386.5 | 34% | 1.933e-63 | 95% | JX559645.1 | |
245.3 | 1395.7 | 34% | 1.933e-63 | 96% | NC_004667.1 | |
245.3 | 1389.3 | 34% | 1.933e-63 | 95% | KP866975.1 | |
245.3 | 1395.7 | 34% | 1.933e-63 | 96% | KP866976.1 | |
245.3 | 1395.7 | 34% | 1.933e-63 | 96% | KP866977.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 6
Range 1: 11189 to 11503 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
245.3 bits(529) | 0.0 | 105/105(100%) | 0/105(0%) | Minus/Minus |
Query 1 TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAV 315 TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAV Subject 11189 TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAV 11503
Range 2: 11190 to 11501 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
239.3 bits(516) | 0.0 | 104/104(100%) | 0/104(0%) | Plus/Plus |
Query 2 TAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG 313 TAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG Subject 11190 TAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG 11501
Range 3: 11189 to 11503 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.4 bits(490) | 0.0 | 100/105(95%) | 0/105(0%) | Plus/Plus |
Query 1 DSRSPLFLS*VASRRPIISGFRLWGRNFRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC 315 D RSPLFLS*VASRRPIISGF WGR+FRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKD RKGV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC Subject 11189 DGRSPLFLS*VASRRPIISGF*FWGRDFRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKD*RKGV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC 11503
Range 4: 11194 to 11502 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
226.0 bits(487) | 0.0 | 100/103(97%) | 0/103(0%) | Minus/Minus |
Query 6 HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRKFLPQSRKPLIIGLLLAT*LRNRGLR 314 HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRK LPQ++KPLIIGLLLAT*LRNRGLR Subject 11194 HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRKSLPQNQKPLIIGLLLAT*LRNRGLR 11502
Range 5: 11193 to 11501 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
225.1 bits(485) | 0.0 | 99/103(96%) | 0/103(0%) | Minus/Minus |
Query 5 TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCG 313 TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSF+LLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DVES SPK++NR***VFYSRLS*GIEGCG Subject 11193 TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFNLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DVESPSPKIKNR***VFYSRLS*GIEGCG 11501
Range 6: 11191 to 11502 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
223.3 bits(481) | 0.0 | 99/104(95%) | 0/104(0%) | Plus/Plus |
Query 3 QPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV 314 +PQPSIP*LSRE*KTYY*RF LGE LSTSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKR KERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV Subject 11191 RPQPSIP*LSRE*KTYY*RFLILGEGLSTSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRLKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV 11502
Grapevine leafroll associated virus 3, complete genome
Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 6
Range 1: 10610 to 10924 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
245.3 bits(529) | 0.0 | 105/105(100%) | 0/105(0%) | Minus/Minus |
Query 1 TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAV 315 TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAV Subject 10610 TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAV 10924
Range 2: 10611 to 10922 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
239.3 bits(516) | 0.0 | 104/104(100%) | 0/104(0%) | Plus/Plus |
Query 2 TAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG 313 TAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG Subject 10611 TAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG 10922
Range 3: 10610 to 10924 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
231.5 bits(499) | 0.0 | 101/105(96%) | 0/105(0%) | Plus/Plus |
Query 1 DSRSPLFLS*VASRRPIISGFRLWGRNFRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC 315 D RSPLFLS*VASRRPIISGF WGR+FRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC Subject 10610 DGRSPLFLS*VASRRPIISGF*FWGRDFRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC 10924
Range 4: 10614 to 10922 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.4 bits(490) | 0.0 | 100/103(97%) | 0/103(0%) | Minus/Minus |
Query 5 TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCG 313 TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DVES SPK++NR***VFYSRLS*GIEGCG Subject 10614 TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DVESPSPKIKNR***VFYSRLS*GIEGCG 10922
Range 5: 10615 to 10923 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
226.0 bits(487) | 0.0 | 100/103(97%) | 0/103(0%) | Minus/Minus |
Query 6 HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRKFLPQSRKPLIIGLLLAT*LRNRGLR 314 HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRK LPQ++KPLIIGLLLAT*LRNRGLR Subject 10615 HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRKSLPQNQKPLIIGLLLAT*LRNRGLR 10923
Range 6: 10612 to 10923 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
226.0 bits(487) | 0.0 | 100/104(96%) | 0/104(0%) | Plus/Plus |
Query 3 QPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV 314 +PQPSIP*LSRE*KTYY*RF LGE LSTSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV Subject 10612 RPQPSIP*LSRE*KTYY*RFLILGEGLSTSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV 10923
Grapevine leafroll associated virus 3 isolate D 42 heat shock protein 70 like protein (HSP70) gene, partial cds
Sequence ID: KP866975.1 Length: 1140 Number of Matches: 6
Range 1: 247 to 561 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
245.3 bits(529) | 0.0 | 105/105(100%) | 0/105(0%) | Minus/Minus |
Query 1 TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAV 315 TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAV Subject 247 TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAV 561
Range 2: 248 to 559 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
239.3 bits(516) | 0.0 | 104/104(100%) | 0/104(0%) | Plus/Plus |
Query 2 TAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG 313 TAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG Subject 248 TAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG 559
Range 3: 247 to 561 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
229.7 bits(495) | 0.0 | 100/105(95%) | 0/105(0%) | Plus/Plus |
Query 1 DSRSPLFLS*VASRRPIISGFRLWGRNFRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC 315 D RSPLFLS*VASRRPIISGF WGR+FRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGR V*Q*RYNATPYPRRRGC Subject 247 DGRSPLFLS*VASRRPIISGF*FWGRDFRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRFV*Q*RYNATPYPRRRGC 561
Range 4: 251 to 559 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.0 bits(489) | 0.0 | 99/103(96%) | 0/103(0%) | Minus/Minus |
Query 5 TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCG 313 TPFYGDKVLRYSVIVRQ+FLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DVES SPK++NR***VFYSRLS*GIEGCG Subject 251 TPFYGDKVLRYSVIVRQIFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DVESPSPKIKNR***VFYSRLS*GIEGCG 559
Range 5: 252 to 560 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
224.7 bits(484) | 0.0 | 99/103(96%) | 0/103(0%) | Minus/Minus |
Query 6 HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRKFLPQSRKPLIIGLLLAT*LRNRGLR 314 HPLLRG*GVAL*RYC*T+LPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRK LPQ++KPLIIGLLLAT*LRNRGLR Subject 252 HPLLRG*GVAL*RYC*TNLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRKSLPQNQKPLIIGLLLAT*LRNRGLR 560
Range 6: 249 to 560 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
223.3 bits(481) | 0.0 | 99/104(95%) | 0/104(0%) | Plus/Plus |
Query 3 QPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV 314 +PQPSIP*LSRE*KTYY*RF LGE LSTSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RK CLTITL*RNTLSP*KGV Subject 249 RPQPSIP*LSRE*KTYY*RFLILGEGLSTSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKICLTITL*RNTLSP*KGV 560
Grapevine leafroll associated virus 3 isolate DA 68 heat shock protein 70 like protein (HSP70) gene, partial cds
Sequence ID: KP866976.1 Length: 1140 Number of Matches: 6
Range 1: 247 to 561 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
245.3 bits(529) | 0.0 | 105/105(100%) | 0/105(0%) | Minus/Minus |
Query 1 TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAV 315 TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAV Subject 247 TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAV 561
Range 2: 248 to 559 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
239.3 bits(516) | 0.0 | 104/104(100%) | 0/104(0%) | Plus/Plus |
Query 2 TAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG 313 TAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG Subject 248 TAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG 559
Range 3: 247 to 561 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
231.5 bits(499) | 0.0 | 101/105(96%) | 0/105(0%) | Plus/Plus |
Query 1 DSRSPLFLS*VASRRPIISGFRLWGRNFRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC 315 D RSPLFLS*VASRRPIISGF WGR+FRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC Subject 247 DGRSPLFLS*VASRRPIISGF*FWGRDFRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC 561
Range 4: 251 to 559 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.4 bits(490) | 0.0 | 100/103(97%) | 0/103(0%) | Minus/Minus |
Query 5 TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCG 313 TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DVES SPK++NR***VFYSRLS*GIEGCG Subject 251 TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DVESPSPKIKNR***VFYSRLS*GIEGCG 559
Range 5: 249 to 560 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
226.0 bits(487) | 0.0 | 100/104(96%) | 0/104(0%) | Plus/Plus |
Query 3 QPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV 314 +PQPSIP*LSRE*KTYY*RF LGE LSTSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV Subject 249 RPQPSIP*LSRE*KTYY*RFLILGEGLSTSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV 560
Range 6: 252 to 560 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
226.0 bits(487) | 0.0 | 100/103(97%) | 0/103(0%) | Minus/Minus |
Query 6 HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRKFLPQSRKPLIIGLLLAT*LRNRGLR 314 HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRK LPQ++KPLIIGLLLAT*LRNRGLR Subject 252 HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRKSLPQNQKPLIIGLLLAT*LRNRGLR 560
Grapevine leafroll associated virus 3 isolate DA 69 heat shock protein 70 like protein (HSP70) gene, partial cds
Sequence ID: KP866977.1 Length: 1140 Number of Matches: 6
Range 1: 247 to 561 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
245.3 bits(529) | 0.0 | 105/105(100%) | 0/105(0%) | Minus/Minus |
Query 1 TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAV 315 TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAV Subject 247 TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDAFPLIFCLITSTIALSISLPPKKLSPTEKMTHSIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAV 561
Range 2: 248 to 559 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
239.3 bits(516) | 0.0 | 104/104(100%) | 0/104(0%) | Plus/Plus |
Query 2 TAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG 313 TAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG Subject 248 TAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG 559
Range 3: 247 to 561 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
231.5 bits(499) | 0.0 | 101/105(96%) | 0/105(0%) | Plus/Plus |
Query 1 DSRSPLFLS*VASRRPIISGFRLWGRNFRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC 315 D RSPLFLS*VASRRPIISGF WGR+FRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC Subject 247 DGRSPLFLS*VASRRPIISGF*FWGRDFRRLIR*EEGKYTMRHLFSG**FLGW*RY**SYRGSYQTKDQRKGV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC 561
Range 4: 251 to 559 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.4 bits(490) | 0.0 | 100/103(97%) | 0/103(0%) | Minus/Minus |
Query 5 TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCG 313 TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DVES SPK++NR***VFYSRLS*GIEGCG Subject 251 TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRRLSFDLLFDNFHDSSINISTTQEIITH*KDDA*YISLLLNE*DVESPSPKIKNR***VFYSRLS*GIEGCG 559
Range 5: 249 to 560 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
226.0 bits(487) | 0.0 | 100/104(96%) | 0/104(0%) | Plus/Plus |
Query 3 QPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV 314 +PQPSIP*LSRE*KTYY*RF LGE LSTSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV Subject 249 RPQPSIP*LSRE*KTYY*RFLILGEGLSTSHSLRRREIYYASSFQWVIISWVVEILIELSWKLSNKRSKERRLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV 560
Range 6: 252 to 560 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
226.0 bits(487) | 0.0 | 100/103(97%) | 0/103(0%) | Minus/Minus |
Query 6 HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRKFLPQSRKPLIIGLLLAT*LRNRGLR 314 HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRK LPQ++KPLIIGLLLAT*LRNRGLR Subject 252 HPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQTPFL*SFV**LPR*LYQYLYHPRNYHPLKR*RIVYFPSS*RMRRRKSLPQNQKPLIIGLLLAT*LRNRGLR 560
Nucleotide Sequence (435 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
296.2 | 1601.7 | 43% | 1.63e-78 | 96% | HQ130283.1 | |
296.2 | 1601.7 | 43% | 1.63e-78 | 96% | HQ130284.1 | |
296.2 | 1601.7 | 43% | 1.63e-78 | 96% | HQ130285.1 | |
296.2 | 1601.7 | 43% | 1.63e-78 | 96% | HQ130286.1 | |
296.2 | 1601.7 | 43% | 1.63e-78 | 96% | HQ130288.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 3 3 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130283.1 Length: 4711 Number of Matches: 8
Range 1: 3013 to 3408 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
296.2 bits(640) | 0.0 | 131/132(99%) | 0/132(0%) | Minus/Plus |
Query 8 AGY*MI*SGKRATRKNLRGETY*IPTSYRLITQGLNEVTFAPLSYLEVVKVA*NERSPGFDTYKGSAYKLLQRLFYR*ECRTKRLSRKYREFSHSQV*FAKLLPCHEGLDH*YSL*GDDRNS*KLYRRLNTR 403 AGY*MI*SGKRATRKNLRGETY*IPTSYRLITQGLNEVTFAPLSYLEVVKVA*NERSPGFDTYKGSAYKLLQRLFYR*ECRTKRLSRKYREFSHSQV*FAKLLP HEGLDH*YSL*GDDRNS*KLYRRLNTR Subject 3013 AGY*MI*SGKRATRKNLRGETY*IPTSYRLITQGLNEVTFAPLSYLEVVKVA*NERSPGFDTYKGSAYKLLQRLFYR*ECRTKRLSRKYREFSHSQV*FAKLLPRHEGLDH*YSL*GDDRNS*KLYRRLNTR 3408
Range 2: 3012 to 3410 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
284.2 bits(614) | 0.0 | 130/133(98%) | 0/133(0%) | Minus/Plus |
Query 6 CGILNDLKWEESNKEKFKGRDILDTYILSSDYPGFK*GYFRSAILS*GCQSRLKRTITWF*YL*RKRL*TITTPLLPMRVPY*ATFAKV*GIFS*PGVVRKTPAVS*RP*SLI*SVR*R*KQLEALSET*YSS 404 CGILNDLKWEESNKEKFKGRDILDTYILSSDYPGFK*GYFRSAILS*GCQSRLKRTITWF*YL*RKRL*TITTPLLPMRVPY*AT AKV*GIFS*PGVVRKTPA S*RP*SLI*SVR R*KQLEALSET*YSS Subject 3012 CGILNDLKWEESNKEKFKGRDILDTYILSSDYPGFK*GYFRSAILS*GCQSRLKRTITWF*YL*RKRL*TITTPLLPMRVPY*ATLAKV*GIFS*PGVVRKTPAAS*RP*SLI*SVRRR*KQLEALSET*YSS 3410
Range 3: 3007 to 3192 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.0 bits(308) | 0.0 | 62/62(100%) | 0/62(0%) | Plus/Minus |
Query 224 KTR*SFVLSDFDNLKIR*RSESNLI*TLGNQTIRCRYLICLSP*IFPCCSLPTSNHSISRTT 409 KTR*SFVLSDFDNLKIR*RSESNLI*TLGNQTIRCRYLICLSP*IFPCCSLPTSNHSISRTT Subject 3007 KTR*SFVLSDFDNLKIR*RSESNLI*TLGNQTIRCRYLICLSP*IFPCCSLPTSNHSISRTT 3192
Range 4: 3226 to 3408 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
129.8 bits(277) | 0.0 | 59/61(97%) | 0/61(0%) | Plus/Minus |
Query 8 TSIKSPIKLLAVSIVTLQTILVIKAFMTRQEFCELHLAMRKFPILSRKSLSTALSSVKEAL 190 TSIKSPIKLLAVSIV LQTILVIKAFMTRQEFCELHLAMRKFPILSR+SLSTALSSVKEAL Subject 3226 TSIKSPIKLLAVSIVALQTILVIKAFMTRQEFCELHLAMRKFPILSRESLSTALSSVKEAL 3408
Range 5: 3083 to 3412 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
248.5 bits(536) | 0.0 | 106/110(96%) | 0/110(0%) | Plus/Minus |
Query 4 ADEY*VSDKASSCFYRHLTDYISDQGLHDTAGVLRTTPGYEKIPYTFAKVA*YGTLIGKRGVVIVYKRFLYKYQNQVIVRFKRL*QPQDKIAERK*PHLNPG*SDDKM*V 333 +DEY*VSDKASSCFYR LTDYISDQGLHD AGVLRTTPGYEKIPYTFA+VA*YGTLIGKRGVVIVYKRFLYKYQNQVIVRFKRL*QPQDKIAERK*PHLNPG*SDDKM*V Subject 3083 SDEY*VSDKASSCFYRRLTDYISDQGLHDAAGVLRTTPGYEKIPYTFARVA*YGTLIGKRGVVIVYKRFLYKYQNQVIVRFKRL*QPQDKIAERK*PHLNPG*SDDKM*V 3412
Range 6: 3170 to 3409 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
178.9 bits(384) | 0.0 | 78/80(98%) | 0/80(0%) | Minus/Plus |
Query 7 KTNDHLVLILIKEALINYYNASFTDESAVLSDFRESIGNFLIARCSSQNSCRVMKALITNIVCKVTIETARSFIGDLILV 246 KTNDHLVLILIKEALINYYNASFTDESAVLSD RESIGNFLIARCSSQNSCRVMKALITNIVCK TIETARSFIGDLILV Subject 3170 KTNDHLVLILIKEALINYYNASFTDESAVLSDSRESIGNFLIARCSSQNSCRVMKALITNIVCKATIETARSFIGDLILV 3409
Range 7: 3008 to 3121 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
84.0 bits(177) | 0.0 | 38/38(100%) | 0/38(0%) | Minus/Plus |
Query 295 VVRDIE*FEVGREQQGKI*GERHIRYLHLIV*LPRV*M 408 VVRDIE*FEVGREQQGKI*GERHIRYLHLIV*LPRV*M Subject 3008 VVRDIE*FEVGREQQGKI*GERHIRYLHLIV*LPRV*M 3121
Range 8: 3012 to 3329 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
236.1 bits(509) | 0.0 | 105/106(99%) | 0/106(0%) | Plus/Minus |
Query 87 *HGRSFANYTWL*ENSLYFRESRLVRHSHR*KRRCNSL*ALPL*VSKPGDRSF*ATLTTSR*DSGAKVTSFKPWVIRR*DVGI*YVSPLKFFLVALFPLQIIQYPA 404 * GRSFANYTWL*ENSLYFRESRLVRHSHR*KRRCNSL*ALPL*VSKPGDRSF*ATLTTSR*DSGAKVTSFKPWVIRR*DVGI*YVSPLKFFLVALFPLQIIQYPA Subject 3012 *RGRSFANYTWL*ENSLYFRESRLVRHSHR*KRRCNSL*ALPL*VSKPGDRSF*ATLTTSR*DSGAKVTSFKPWVIRR*DVGI*YVSPLKFFLVALFPLQIIQYPA 3329
Grapevine leafroll associated virus 3 isolate 3 5 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130284.1 Length: 4711 Number of Matches: 8
Range 1: 3013 to 3408 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
296.2 bits(640) | 0.0 | 131/132(99%) | 0/132(0%) | Minus/Plus |
Query 8 AGY*MI*SGKRATRKNLRGETY*IPTSYRLITQGLNEVTFAPLSYLEVVKVA*NERSPGFDTYKGSAYKLLQRLFYR*ECRTKRLSRKYREFSHSQV*FAKLLPCHEGLDH*YSL*GDDRNS*KLYRRLNTR 403 AGY*MI*SGKRATRKNLRGETY*IPTSYRLITQGLNEVTFAPLSYLEVVKVA*NERSPGFDTYKGSAYKLLQRLFYR*ECRTKRLSRKYREFSHSQV*FAKLLP HEGLDH*YSL*GDDRNS*KLYRRLNTR Subject 3013 AGY*MI*SGKRATRKNLRGETY*IPTSYRLITQGLNEVTFAPLSYLEVVKVA*NERSPGFDTYKGSAYKLLQRLFYR*ECRTKRLSRKYREFSHSQV*FAKLLPRHEGLDH*YSL*GDDRNS*KLYRRLNTR 3408
Range 2: 3012 to 3410 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
284.2 bits(614) | 0.0 | 130/133(98%) | 0/133(0%) | Minus/Plus |
Query 6 CGILNDLKWEESNKEKFKGRDILDTYILSSDYPGFK*GYFRSAILS*GCQSRLKRTITWF*YL*RKRL*TITTPLLPMRVPY*ATFAKV*GIFS*PGVVRKTPAVS*RP*SLI*SVR*R*KQLEALSET*YSS 404 CGILNDLKWEESNKEKFKGRDILDTYILSSDYPGFK*GYFRSAILS*GCQSRLKRTITWF*YL*RKRL*TITTPLLPMRVPY*AT AKV*GIFS*PGVVRKTPA S*RP*SLI*SVR R*KQLEALSET*YSS Subject 3012 CGILNDLKWEESNKEKFKGRDILDTYILSSDYPGFK*GYFRSAILS*GCQSRLKRTITWF*YL*RKRL*TITTPLLPMRVPY*ATLAKV*GIFS*PGVVRKTPAAS*RP*SLI*SVRRR*KQLEALSET*YSS 3410
Range 3: 3007 to 3192 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.0 bits(308) | 0.0 | 62/62(100%) | 0/62(0%) | Plus/Minus |
Query 224 KTR*SFVLSDFDNLKIR*RSESNLI*TLGNQTIRCRYLICLSP*IFPCCSLPTSNHSISRTT 409 KTR*SFVLSDFDNLKIR*RSESNLI*TLGNQTIRCRYLICLSP*IFPCCSLPTSNHSISRTT Subject 3007 KTR*SFVLSDFDNLKIR*RSESNLI*TLGNQTIRCRYLICLSP*IFPCCSLPTSNHSISRTT 3192
Range 4: 3226 to 3408 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
129.8 bits(277) | 0.0 | 59/61(97%) | 0/61(0%) | Plus/Minus |
Query 8 TSIKSPIKLLAVSIVTLQTILVIKAFMTRQEFCELHLAMRKFPILSRKSLSTALSSVKEAL 190 TSIKSPIKLLAVSIV LQTILVIKAFMTRQEFCELHLAMRKFPILSR+SLSTALSSVKEAL Subject 3226 TSIKSPIKLLAVSIVALQTILVIKAFMTRQEFCELHLAMRKFPILSRESLSTALSSVKEAL 3408
Range 5: 3083 to 3412 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
248.5 bits(536) | 0.0 | 106/110(96%) | 0/110(0%) | Plus/Minus |
Query 4 ADEY*VSDKASSCFYRHLTDYISDQGLHDTAGVLRTTPGYEKIPYTFAKVA*YGTLIGKRGVVIVYKRFLYKYQNQVIVRFKRL*QPQDKIAERK*PHLNPG*SDDKM*V 333 +DEY*VSDKASSCFYR LTDYISDQGLHD AGVLRTTPGYEKIPYTFA+VA*YGTLIGKRGVVIVYKRFLYKYQNQVIVRFKRL*QPQDKIAERK*PHLNPG*SDDKM*V Subject 3083 SDEY*VSDKASSCFYRRLTDYISDQGLHDAAGVLRTTPGYEKIPYTFARVA*YGTLIGKRGVVIVYKRFLYKYQNQVIVRFKRL*QPQDKIAERK*PHLNPG*SDDKM*V 3412
Range 6: 3170 to 3409 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
178.9 bits(384) | 0.0 | 78/80(98%) | 0/80(0%) | Minus/Plus |
Query 7 KTNDHLVLILIKEALINYYNASFTDESAVLSDFRESIGNFLIARCSSQNSCRVMKALITNIVCKVTIETARSFIGDLILV 246 KTNDHLVLILIKEALINYYNASFTDESAVLSD RESIGNFLIARCSSQNSCRVMKALITNIVCK TIETARSFIGDLILV Subject 3170 KTNDHLVLILIKEALINYYNASFTDESAVLSDSRESIGNFLIARCSSQNSCRVMKALITNIVCKATIETARSFIGDLILV 3409
Range 7: 3008 to 3121 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
84.0 bits(177) | 0.0 | 38/38(100%) | 0/38(0%) | Minus/Plus |
Query 295 VVRDIE*FEVGREQQGKI*GERHIRYLHLIV*LPRV*M 408 VVRDIE*FEVGREQQGKI*GERHIRYLHLIV*LPRV*M Subject 3008 VVRDIE*FEVGREQQGKI*GERHIRYLHLIV*LPRV*M 3121
Range 8: 3012 to 3329 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
236.1 bits(509) | 0.0 | 105/106(99%) | 0/106(0%) | Plus/Minus |
Query 87 *HGRSFANYTWL*ENSLYFRESRLVRHSHR*KRRCNSL*ALPL*VSKPGDRSF*ATLTTSR*DSGAKVTSFKPWVIRR*DVGI*YVSPLKFFLVALFPLQIIQYPA 404 * GRSFANYTWL*ENSLYFRESRLVRHSHR*KRRCNSL*ALPL*VSKPGDRSF*ATLTTSR*DSGAKVTSFKPWVIRR*DVGI*YVSPLKFFLVALFPLQIIQYPA Subject 3012 *RGRSFANYTWL*ENSLYFRESRLVRHSHR*KRRCNSL*ALPL*VSKPGDRSF*ATLTTSR*DSGAKVTSFKPWVIRR*DVGI*YVSPLKFFLVALFPLQIIQYPA 3329
Grapevine leafroll associated virus 3 isolate 3 7 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130285.1 Length: 4711 Number of Matches: 8
Range 1: 3013 to 3408 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
296.2 bits(640) | 0.0 | 131/132(99%) | 0/132(0%) | Minus/Plus |
Query 8 AGY*MI*SGKRATRKNLRGETY*IPTSYRLITQGLNEVTFAPLSYLEVVKVA*NERSPGFDTYKGSAYKLLQRLFYR*ECRTKRLSRKYREFSHSQV*FAKLLPCHEGLDH*YSL*GDDRNS*KLYRRLNTR 403 AGY*MI*SGKRATRKNLRGETY*IPTSYRLITQGLNEVTFAPLSYLEVVKVA*NERSPGFDTYKGSAYKLLQRLFYR*ECRTKRLSRKYREFSHSQV*FAKLLP HEGLDH*YSL*GDDRNS*KLYRRLNTR Subject 3013 AGY*MI*SGKRATRKNLRGETY*IPTSYRLITQGLNEVTFAPLSYLEVVKVA*NERSPGFDTYKGSAYKLLQRLFYR*ECRTKRLSRKYREFSHSQV*FAKLLPRHEGLDH*YSL*GDDRNS*KLYRRLNTR 3408
Range 2: 3012 to 3410 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
284.2 bits(614) | 0.0 | 130/133(98%) | 0/133(0%) | Minus/Plus |
Query 6 CGILNDLKWEESNKEKFKGRDILDTYILSSDYPGFK*GYFRSAILS*GCQSRLKRTITWF*YL*RKRL*TITTPLLPMRVPY*ATFAKV*GIFS*PGVVRKTPAVS*RP*SLI*SVR*R*KQLEALSET*YSS 404 CGILNDLKWEESNKEKFKGRDILDTYILSSDYPGFK*GYFRSAILS*GCQSRLKRTITWF*YL*RKRL*TITTPLLPMRVPY*AT AKV*GIFS*PGVVRKTPA S*RP*SLI*SVR R*KQLEALSET*YSS Subject 3012 CGILNDLKWEESNKEKFKGRDILDTYILSSDYPGFK*GYFRSAILS*GCQSRLKRTITWF*YL*RKRL*TITTPLLPMRVPY*ATLAKV*GIFS*PGVVRKTPAAS*RP*SLI*SVRRR*KQLEALSET*YSS 3410
Range 3: 3007 to 3192 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.0 bits(308) | 0.0 | 62/62(100%) | 0/62(0%) | Plus/Minus |
Query 224 KTR*SFVLSDFDNLKIR*RSESNLI*TLGNQTIRCRYLICLSP*IFPCCSLPTSNHSISRTT 409 KTR*SFVLSDFDNLKIR*RSESNLI*TLGNQTIRCRYLICLSP*IFPCCSLPTSNHSISRTT Subject 3007 KTR*SFVLSDFDNLKIR*RSESNLI*TLGNQTIRCRYLICLSP*IFPCCSLPTSNHSISRTT 3192
Range 4: 3226 to 3408 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
129.8 bits(277) | 0.0 | 59/61(97%) | 0/61(0%) | Plus/Minus |
Query 8 TSIKSPIKLLAVSIVTLQTILVIKAFMTRQEFCELHLAMRKFPILSRKSLSTALSSVKEAL 190 TSIKSPIKLLAVSIV LQTILVIKAFMTRQEFCELHLAMRKFPILSR+SLSTALSSVKEAL Subject 3226 TSIKSPIKLLAVSIVALQTILVIKAFMTRQEFCELHLAMRKFPILSRESLSTALSSVKEAL 3408
Range 5: 3083 to 3412 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
248.5 bits(536) | 0.0 | 106/110(96%) | 0/110(0%) | Plus/Minus |
Query 4 ADEY*VSDKASSCFYRHLTDYISDQGLHDTAGVLRTTPGYEKIPYTFAKVA*YGTLIGKRGVVIVYKRFLYKYQNQVIVRFKRL*QPQDKIAERK*PHLNPG*SDDKM*V 333 +DEY*VSDKASSCFYR LTDYISDQGLHD AGVLRTTPGYEKIPYTFA+VA*YGTLIGKRGVVIVYKRFLYKYQNQVIVRFKRL*QPQDKIAERK*PHLNPG*SDDKM*V Subject 3083 SDEY*VSDKASSCFYRRLTDYISDQGLHDAAGVLRTTPGYEKIPYTFARVA*YGTLIGKRGVVIVYKRFLYKYQNQVIVRFKRL*QPQDKIAERK*PHLNPG*SDDKM*V 3412
Range 6: 3170 to 3409 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
178.9 bits(384) | 0.0 | 78/80(98%) | 0/80(0%) | Minus/Plus |
Query 7 KTNDHLVLILIKEALINYYNASFTDESAVLSDFRESIGNFLIARCSSQNSCRVMKALITNIVCKVTIETARSFIGDLILV 246 KTNDHLVLILIKEALINYYNASFTDESAVLSD RESIGNFLIARCSSQNSCRVMKALITNIVCK TIETARSFIGDLILV Subject 3170 KTNDHLVLILIKEALINYYNASFTDESAVLSDSRESIGNFLIARCSSQNSCRVMKALITNIVCKATIETARSFIGDLILV 3409
Range 7: 3008 to 3121 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
84.0 bits(177) | 0.0 | 38/38(100%) | 0/38(0%) | Minus/Plus |
Query 295 VVRDIE*FEVGREQQGKI*GERHIRYLHLIV*LPRV*M 408 VVRDIE*FEVGREQQGKI*GERHIRYLHLIV*LPRV*M Subject 3008 VVRDIE*FEVGREQQGKI*GERHIRYLHLIV*LPRV*M 3121
Range 8: 3012 to 3329 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
236.1 bits(509) | 0.0 | 105/106(99%) | 0/106(0%) | Plus/Minus |
Query 87 *HGRSFANYTWL*ENSLYFRESRLVRHSHR*KRRCNSL*ALPL*VSKPGDRSF*ATLTTSR*DSGAKVTSFKPWVIRR*DVGI*YVSPLKFFLVALFPLQIIQYPA 404 * GRSFANYTWL*ENSLYFRESRLVRHSHR*KRRCNSL*ALPL*VSKPGDRSF*ATLTTSR*DSGAKVTSFKPWVIRR*DVGI*YVSPLKFFLVALFPLQIIQYPA Subject 3012 *RGRSFANYTWL*ENSLYFRESRLVRHSHR*KRRCNSL*ALPL*VSKPGDRSF*ATLTTSR*DSGAKVTSFKPWVIRR*DVGI*YVSPLKFFLVALFPLQIIQYPA 3329
Grapevine leafroll associated virus 3 isolate 3 8 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130286.1 Length: 4711 Number of Matches: 8
Range 1: 3013 to 3408 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
296.2 bits(640) | 0.0 | 131/132(99%) | 0/132(0%) | Minus/Plus |
Query 8 AGY*MI*SGKRATRKNLRGETY*IPTSYRLITQGLNEVTFAPLSYLEVVKVA*NERSPGFDTYKGSAYKLLQRLFYR*ECRTKRLSRKYREFSHSQV*FAKLLPCHEGLDH*YSL*GDDRNS*KLYRRLNTR 403 AGY*MI*SGKRATRKNLRGETY*IPTSYRLITQGLNEVTFAPLSYLEVVKVA*NERSPGFDTYKGSAYKLLQRLFYR*ECRTKRLSRKYREFSHSQV*FAKLLP HEGLDH*YSL*GDDRNS*KLYRRLNTR Subject 3013 AGY*MI*SGKRATRKNLRGETY*IPTSYRLITQGLNEVTFAPLSYLEVVKVA*NERSPGFDTYKGSAYKLLQRLFYR*ECRTKRLSRKYREFSHSQV*FAKLLPRHEGLDH*YSL*GDDRNS*KLYRRLNTR 3408
Range 2: 3012 to 3410 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
284.2 bits(614) | 0.0 | 130/133(98%) | 0/133(0%) | Minus/Plus |
Query 6 CGILNDLKWEESNKEKFKGRDILDTYILSSDYPGFK*GYFRSAILS*GCQSRLKRTITWF*YL*RKRL*TITTPLLPMRVPY*ATFAKV*GIFS*PGVVRKTPAVS*RP*SLI*SVR*R*KQLEALSET*YSS 404 CGILNDLKWEESNKEKFKGRDILDTYILSSDYPGFK*GYFRSAILS*GCQSRLKRTITWF*YL*RKRL*TITTPLLPMRVPY*AT AKV*GIFS*PGVVRKTPA S*RP*SLI*SVR R*KQLEALSET*YSS Subject 3012 CGILNDLKWEESNKEKFKGRDILDTYILSSDYPGFK*GYFRSAILS*GCQSRLKRTITWF*YL*RKRL*TITTPLLPMRVPY*ATLAKV*GIFS*PGVVRKTPAAS*RP*SLI*SVRRR*KQLEALSET*YSS 3410
Range 3: 3007 to 3192 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.0 bits(308) | 0.0 | 62/62(100%) | 0/62(0%) | Plus/Minus |
Query 224 KTR*SFVLSDFDNLKIR*RSESNLI*TLGNQTIRCRYLICLSP*IFPCCSLPTSNHSISRTT 409 KTR*SFVLSDFDNLKIR*RSESNLI*TLGNQTIRCRYLICLSP*IFPCCSLPTSNHSISRTT Subject 3007 KTR*SFVLSDFDNLKIR*RSESNLI*TLGNQTIRCRYLICLSP*IFPCCSLPTSNHSISRTT 3192
Range 4: 3226 to 3408 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
129.8 bits(277) | 0.0 | 59/61(97%) | 0/61(0%) | Plus/Minus |
Query 8 TSIKSPIKLLAVSIVTLQTILVIKAFMTRQEFCELHLAMRKFPILSRKSLSTALSSVKEAL 190 TSIKSPIKLLAVSIV LQTILVIKAFMTRQEFCELHLAMRKFPILSR+SLSTALSSVKEAL Subject 3226 TSIKSPIKLLAVSIVALQTILVIKAFMTRQEFCELHLAMRKFPILSRESLSTALSSVKEAL 3408
Range 5: 3083 to 3412 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
248.5 bits(536) | 0.0 | 106/110(96%) | 0/110(0%) | Plus/Minus |
Query 4 ADEY*VSDKASSCFYRHLTDYISDQGLHDTAGVLRTTPGYEKIPYTFAKVA*YGTLIGKRGVVIVYKRFLYKYQNQVIVRFKRL*QPQDKIAERK*PHLNPG*SDDKM*V 333 +DEY*VSDKASSCFYR LTDYISDQGLHD AGVLRTTPGYEKIPYTFA+VA*YGTLIGKRGVVIVYKRFLYKYQNQVIVRFKRL*QPQDKIAERK*PHLNPG*SDDKM*V Subject 3083 SDEY*VSDKASSCFYRRLTDYISDQGLHDAAGVLRTTPGYEKIPYTFARVA*YGTLIGKRGVVIVYKRFLYKYQNQVIVRFKRL*QPQDKIAERK*PHLNPG*SDDKM*V 3412
Range 6: 3170 to 3409 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
178.9 bits(384) | 0.0 | 78/80(98%) | 0/80(0%) | Minus/Plus |
Query 7 KTNDHLVLILIKEALINYYNASFTDESAVLSDFRESIGNFLIARCSSQNSCRVMKALITNIVCKVTIETARSFIGDLILV 246 KTNDHLVLILIKEALINYYNASFTDESAVLSD RESIGNFLIARCSSQNSCRVMKALITNIVCK TIETARSFIGDLILV Subject 3170 KTNDHLVLILIKEALINYYNASFTDESAVLSDSRESIGNFLIARCSSQNSCRVMKALITNIVCKATIETARSFIGDLILV 3409
Range 7: 3008 to 3121 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
84.0 bits(177) | 0.0 | 38/38(100%) | 0/38(0%) | Minus/Plus |
Query 295 VVRDIE*FEVGREQQGKI*GERHIRYLHLIV*LPRV*M 408 VVRDIE*FEVGREQQGKI*GERHIRYLHLIV*LPRV*M Subject 3008 VVRDIE*FEVGREQQGKI*GERHIRYLHLIV*LPRV*M 3121
Range 8: 3012 to 3329 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
236.1 bits(509) | 0.0 | 105/106(99%) | 0/106(0%) | Plus/Minus |
Query 87 *HGRSFANYTWL*ENSLYFRESRLVRHSHR*KRRCNSL*ALPL*VSKPGDRSF*ATLTTSR*DSGAKVTSFKPWVIRR*DVGI*YVSPLKFFLVALFPLQIIQYPA 404 * GRSFANYTWL*ENSLYFRESRLVRHSHR*KRRCNSL*ALPL*VSKPGDRSF*ATLTTSR*DSGAKVTSFKPWVIRR*DVGI*YVSPLKFFLVALFPLQIIQYPA Subject 3012 *RGRSFANYTWL*ENSLYFRESRLVRHSHR*KRRCNSL*ALPL*VSKPGDRSF*ATLTTSR*DSGAKVTSFKPWVIRR*DVGI*YVSPLKFFLVALFPLQIIQYPA 3329
Grapevine leafroll associated virus 3 isolate 3 13 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130288.1 Length: 4711 Number of Matches: 8
Range 1: 3013 to 3408 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
296.2 bits(640) | 0.0 | 131/132(99%) | 0/132(0%) | Minus/Plus |
Query 8 AGY*MI*SGKRATRKNLRGETY*IPTSYRLITQGLNEVTFAPLSYLEVVKVA*NERSPGFDTYKGSAYKLLQRLFYR*ECRTKRLSRKYREFSHSQV*FAKLLPCHEGLDH*YSL*GDDRNS*KLYRRLNTR 403 AGY*MI*SGKRATRKNLRGETY*IPTSYRLITQGLNEVTFAPLSYLEVVKVA*NERSPGFDTYKGSAYKLLQRLFYR*ECRTKRLSRKYREFSHSQV*FAKLLP HEGLDH*YSL*GDDRNS*KLYRRLNTR Subject 3013 AGY*MI*SGKRATRKNLRGETY*IPTSYRLITQGLNEVTFAPLSYLEVVKVA*NERSPGFDTYKGSAYKLLQRLFYR*ECRTKRLSRKYREFSHSQV*FAKLLPRHEGLDH*YSL*GDDRNS*KLYRRLNTR 3408
Range 2: 3012 to 3410 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
284.2 bits(614) | 0.0 | 130/133(98%) | 0/133(0%) | Minus/Plus |
Query 6 CGILNDLKWEESNKEKFKGRDILDTYILSSDYPGFK*GYFRSAILS*GCQSRLKRTITWF*YL*RKRL*TITTPLLPMRVPY*ATFAKV*GIFS*PGVVRKTPAVS*RP*SLI*SVR*R*KQLEALSET*YSS 404 CGILNDLKWEESNKEKFKGRDILDTYILSSDYPGFK*GYFRSAILS*GCQSRLKRTITWF*YL*RKRL*TITTPLLPMRVPY*AT AKV*GIFS*PGVVRKTPA S*RP*SLI*SVR R*KQLEALSET*YSS Subject 3012 CGILNDLKWEESNKEKFKGRDILDTYILSSDYPGFK*GYFRSAILS*GCQSRLKRTITWF*YL*RKRL*TITTPLLPMRVPY*ATLAKV*GIFS*PGVVRKTPAAS*RP*SLI*SVRRR*KQLEALSET*YSS 3410
Range 3: 3007 to 3192 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.0 bits(308) | 0.0 | 62/62(100%) | 0/62(0%) | Plus/Minus |
Query 224 KTR*SFVLSDFDNLKIR*RSESNLI*TLGNQTIRCRYLICLSP*IFPCCSLPTSNHSISRTT 409 KTR*SFVLSDFDNLKIR*RSESNLI*TLGNQTIRCRYLICLSP*IFPCCSLPTSNHSISRTT Subject 3007 KTR*SFVLSDFDNLKIR*RSESNLI*TLGNQTIRCRYLICLSP*IFPCCSLPTSNHSISRTT 3192
Range 4: 3226 to 3408 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
129.8 bits(277) | 0.0 | 59/61(97%) | 0/61(0%) | Plus/Minus |
Query 8 TSIKSPIKLLAVSIVTLQTILVIKAFMTRQEFCELHLAMRKFPILSRKSLSTALSSVKEAL 190 TSIKSPIKLLAVSIV LQTILVIKAFMTRQEFCELHLAMRKFPILSR+SLSTALSSVKEAL Subject 3226 TSIKSPIKLLAVSIVALQTILVIKAFMTRQEFCELHLAMRKFPILSRESLSTALSSVKEAL 3408
Range 5: 3083 to 3412 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
248.5 bits(536) | 0.0 | 106/110(96%) | 0/110(0%) | Plus/Minus |
Query 4 ADEY*VSDKASSCFYRHLTDYISDQGLHDTAGVLRTTPGYEKIPYTFAKVA*YGTLIGKRGVVIVYKRFLYKYQNQVIVRFKRL*QPQDKIAERK*PHLNPG*SDDKM*V 333 +DEY*VSDKASSCFYR LTDYISDQGLHD AGVLRTTPGYEKIPYTFA+VA*YGTLIGKRGVVIVYKRFLYKYQNQVIVRFKRL*QPQDKIAERK*PHLNPG*SDDKM*V Subject 3083 SDEY*VSDKASSCFYRRLTDYISDQGLHDAAGVLRTTPGYEKIPYTFARVA*YGTLIGKRGVVIVYKRFLYKYQNQVIVRFKRL*QPQDKIAERK*PHLNPG*SDDKM*V 3412
Range 6: 3170 to 3409 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
178.9 bits(384) | 0.0 | 78/80(98%) | 0/80(0%) | Minus/Plus |
Query 7 KTNDHLVLILIKEALINYYNASFTDESAVLSDFRESIGNFLIARCSSQNSCRVMKALITNIVCKVTIETARSFIGDLILV 246 KTNDHLVLILIKEALINYYNASFTDESAVLSD RESIGNFLIARCSSQNSCRVMKALITNIVCK TIETARSFIGDLILV Subject 3170 KTNDHLVLILIKEALINYYNASFTDESAVLSDSRESIGNFLIARCSSQNSCRVMKALITNIVCKATIETARSFIGDLILV 3409
Range 7: 3008 to 3121 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
84.0 bits(177) | 0.0 | 38/38(100%) | 0/38(0%) | Minus/Plus |
Query 295 VVRDIE*FEVGREQQGKI*GERHIRYLHLIV*LPRV*M 408 VVRDIE*FEVGREQQGKI*GERHIRYLHLIV*LPRV*M Subject 3008 VVRDIE*FEVGREQQGKI*GERHIRYLHLIV*LPRV*M 3121
Range 8: 3012 to 3329 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
236.1 bits(509) | 0.0 | 105/106(99%) | 0/106(0%) | Plus/Minus |
Query 87 *HGRSFANYTWL*ENSLYFRESRLVRHSHR*KRRCNSL*ALPL*VSKPGDRSF*ATLTTSR*DSGAKVTSFKPWVIRR*DVGI*YVSPLKFFLVALFPLQIIQYPA 404 * GRSFANYTWL*ENSLYFRESRLVRHSHR*KRRCNSL*ALPL*VSKPGDRSF*ATLTTSR*DSGAKVTSFKPWVIRR*DVGI*YVSPLKFFLVALFPLQIIQYPA Subject 3012 *RGRSFANYTWL*ENSLYFRESRLVRHSHR*KRRCNSL*ALPL*VSKPGDRSF*ATLTTSR*DSGAKVTSFKPWVIRR*DVGI*YVSPLKFFLVALFPLQIIQYPA 3329
Nucleotide Sequence (132 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
108.3 | 556.7 | 33% | 5.366e-23 | 95% | HQ130295.1 | |
108.3 | 556.7 | 33% | 5.366e-23 | 95% | HQ130297.1 | |
108.3 | 556.7 | 33% | 5.366e-23 | 95% | HQ130300.1 | |
108.3 | 556.7 | 33% | 5.366e-23 | 95% | HQ130301.1 | |
108.3 | 556.7 | 33% | 5.366e-23 | 95% | HQ130303.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 6 6 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130295.1 Length: 4711 Number of Matches: 6
Range 1: 3535 to 3663 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
108.3 bits(230) | 0.0 | 42/43(98%) | 0/43(0%) | Minus/Minus |
Query 2 SMML*PRDEISKCCSTFPPPCLPTQTSFKESTRPNPRFSPDKI 130 SMML*PRDEISKCCSTFPPPCLPTQTSFKEST PNPRFSPDKI Subject 3535 SMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI 3663
Range 2: 3534 to 3665 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
98.7 bits(209) | 0.0 | 42/44(95%) | 0/44(0%) | Minus/Minus |
Query 1 GP*CFNLEMRLVSAVVRFHLLVYLRKLASRNLRAPILDSPQTKY 132 GP*CFN EMRLVSAVVRFHLLVYLRKLASRNLR PILDSPQTKY Subject 3534 GP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY 3665
Range 3: 3534 to 3665 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
98.7 bits(209) | 0.0 | 43/44(98%) | 0/44(0%) | Plus/Plus |
Query 1 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHL*VKASWT 132 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHL VKASWT Subject 3534 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWT 3665
Range 4: 3536 to 3664 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
95.5 bits(202) | 0.0 | 42/43(98%) | 0/43(0%) | Plus/Plus |
Query 3 ILSGENRGLGRVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMD 131 ILSGENRGLG VDSLKLVCVGRQGGGNVLQHLLISSLG*SIMD Subject 3536 ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMD 3664
Grapevine leafroll associated virus 3 isolate 6 11 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130297.1 Length: 4711 Number of Matches: 6
Range 1: 3535 to 3663 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
108.3 bits(230) | 0.0 | 42/43(98%) | 0/43(0%) | Minus/Minus |
Query 2 SMML*PRDEISKCCSTFPPPCLPTQTSFKESTRPNPRFSPDKI 130 SMML*PRDEISKCCSTFPPPCLPTQTSFKEST PNPRFSPDKI Subject 3535 SMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI 3663
Range 2: 3534 to 3665 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
98.7 bits(209) | 0.0 | 42/44(95%) | 0/44(0%) | Minus/Minus |
Query 1 GP*CFNLEMRLVSAVVRFHLLVYLRKLASRNLRAPILDSPQTKY 132 GP*CFN EMRLVSAVVRFHLLVYLRKLASRNLR PILDSPQTKY Subject 3534 GP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY 3665
Range 3: 3534 to 3665 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
98.7 bits(209) | 0.0 | 43/44(98%) | 0/44(0%) | Plus/Plus |
Query 1 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHL*VKASWT 132 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHL VKASWT Subject 3534 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWT 3665
Range 4: 3536 to 3664 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
95.5 bits(202) | 0.0 | 42/43(98%) | 0/43(0%) | Plus/Plus |
Query 3 ILSGENRGLGRVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMD 131 ILSGENRGLG VDSLKLVCVGRQGGGNVLQHLLISSLG*SIMD Subject 3536 ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMD 3664
Grapevine leafroll associated virus 3 isolate 6 18 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130300.1 Length: 4711 Number of Matches: 6
Range 1: 3535 to 3663 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
108.3 bits(230) | 0.0 | 42/43(98%) | 0/43(0%) | Minus/Minus |
Query 2 SMML*PRDEISKCCSTFPPPCLPTQTSFKESTRPNPRFSPDKI 130 SMML*PRDEISKCCSTFPPPCLPTQTSFKEST PNPRFSPDKI Subject 3535 SMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI 3663
Range 2: 3534 to 3665 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
98.7 bits(209) | 0.0 | 42/44(95%) | 0/44(0%) | Minus/Minus |
Query 1 GP*CFNLEMRLVSAVVRFHLLVYLRKLASRNLRAPILDSPQTKY 132 GP*CFN EMRLVSAVVRFHLLVYLRKLASRNLR PILDSPQTKY Subject 3534 GP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY 3665
Range 3: 3534 to 3665 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
98.7 bits(209) | 0.0 | 43/44(98%) | 0/44(0%) | Plus/Plus |
Query 1 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHL*VKASWT 132 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHL VKASWT Subject 3534 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWT 3665
Range 4: 3536 to 3664 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
95.5 bits(202) | 0.0 | 42/43(98%) | 0/43(0%) | Plus/Plus |
Query 3 ILSGENRGLGRVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMD 131 ILSGENRGLG VDSLKLVCVGRQGGGNVLQHLLISSLG*SIMD Subject 3536 ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMD 3664
Grapevine leafroll associated virus 3 isolate 6 102 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130301.1 Length: 4711 Number of Matches: 6
Range 1: 3535 to 3663 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
108.3 bits(230) | 0.0 | 42/43(98%) | 0/43(0%) | Minus/Minus |
Query 2 SMML*PRDEISKCCSTFPPPCLPTQTSFKESTRPNPRFSPDKI 130 SMML*PRDEISKCCSTFPPPCLPTQTSFKEST PNPRFSPDKI Subject 3535 SMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI 3663
Range 2: 3534 to 3665 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
98.7 bits(209) | 0.0 | 42/44(95%) | 0/44(0%) | Minus/Minus |
Query 1 GP*CFNLEMRLVSAVVRFHLLVYLRKLASRNLRAPILDSPQTKY 132 GP*CFN EMRLVSAVVRFHLLVYLRKLASRNLR PILDSPQTKY Subject 3534 GP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY 3665
Range 3: 3534 to 3665 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
98.7 bits(209) | 0.0 | 43/44(98%) | 0/44(0%) | Plus/Plus |
Query 1 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHL*VKASWT 132 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHL VKASWT Subject 3534 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWT 3665
Range 4: 3536 to 3664 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
95.5 bits(202) | 0.0 | 42/43(98%) | 0/43(0%) | Plus/Plus |
Query 3 ILSGENRGLGRVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMD 131 ILSGENRGLG VDSLKLVCVGRQGGGNVLQHLLISSLG*SIMD Subject 3536 ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMD 3664
Grapevine leafroll associated virus 3 isolate 6 114 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130303.1 Length: 4711 Number of Matches: 6
Range 1: 3535 to 3663 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
108.3 bits(230) | 0.0 | 42/43(98%) | 0/43(0%) | Minus/Minus |
Query 2 SMML*PRDEISKCCSTFPPPCLPTQTSFKESTRPNPRFSPDKI 130 SMML*PRDEISKCCSTFPPPCLPTQTSFKEST PNPRFSPDKI Subject 3535 SMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI 3663
Range 2: 3534 to 3665 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
98.7 bits(209) | 0.0 | 42/44(95%) | 0/44(0%) | Minus/Minus |
Query 1 GP*CFNLEMRLVSAVVRFHLLVYLRKLASRNLRAPILDSPQTKY 132 GP*CFN EMRLVSAVVRFHLLVYLRKLASRNLR PILDSPQTKY Subject 3534 GP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY 3665
Range 3: 3534 to 3665 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
98.7 bits(209) | 0.0 | 43/44(98%) | 0/44(0%) | Plus/Plus |
Query 1 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHL*VKASWT 132 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHL VKASWT Subject 3534 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWT 3665
Range 4: 3536 to 3664 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
95.5 bits(202) | 0.0 | 42/43(98%) | 0/43(0%) | Plus/Plus |
Query 3 ILSGENRGLGRVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMD 131 ILSGENRGLG VDSLKLVCVGRQGGGNVLQHLLISSLG*SIMD Subject 3536 ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMD 3664
Nucleotide Sequence (1118 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
883.6 | 4954.0 | 27% | 0 | 94% | KX756669.1 | |
881.3 | 4944.4 | 27% | 0 | 94% | JX559645.1 | |
881.3 | 4944.4 | 27% | 0 | 94% | GQ352631.1 | |
881.3 | 4944.4 | 27% | 0 | 94% | GU983863.1 | |
875.8 | 4482.6 | 31% | 0 | 86% | KJ174518.1 |
Alignments
Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome
Sequence ID: KX756669.1 Length: 18313 Number of Matches: 8
Range 1: 1453 to 2568 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
883.6 bits(1922) | 0.0 | 368/372(99%) | 0/372(0%) | Minus/Plus |
Query 3 RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSVGFLMRMGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPNVPKTAIVAGDRTRLGGEILASVANALNQEEVYSSVVSSITNRLVLRDQSALLSHLDTKLCDMFSQRDAMIREKPSHRCDVFLKPQEKERLRELFPELSIQFSESVRSSHPSANAMRSCFNGIFSRRCGGVCFFDIGGSFTYHVKAGHVNCHVCNPVLDVKDVKRRINEILFLSTAGGDSYVSSDLLTEAASKSVSYCSRESQNCDSRADAGFMVDVYDISPQQVAEAMDKKGALVFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFS 1118 RAFV TT+GWCWFNNERLRGEIYRRRCFSSSFSVGFLMRMGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPNVPKTAIVAGDRTRLGGEILASVANALNQEEVYSSVVSSITNRLVLRDQSALLSHLDTKLCDMFSQRDAMIREKPSHRCDVFLKPQEKERLRELFPELSIQFS+SVRSSHP ANAMRSCFNGIFSRRCGGVCFFDIGGSFTYHVKAGHVNCHVCNPVLDVKDVKRRINEILFLSTAGGDSYVSSDLLTEAASKSVSYCSRESQNCDSRADAGFMVDVYDISPQQVAEAMDKKGALVFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFS Subject 1453 RAFVCTTRGWCWFNNERLRGEIYRRRCFSSSFSVGFLMRMGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPNVPKTAIVAGDRTRLGGEILASVANALNQEEVYSSVVSSITNRLVLRDQSALLSHLDTKLCDMFSQRDAMIREKPSHRCDVFLKPQEKERLRELFPELSIQFSDSVRSSHPFANAMRSCFNGIFSRRCGGVCFFDIGGSFTYHVKAGHVNCHVCNPVLDVKDVKRRINEILFLSTAGGDSYVSSDLLTEAASKSVSYCSRESQNCDSRADAGFMVDVYDISPQQVAEAMDKKGALVFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFS 2568
Range 2: 1453 to 2568 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
872.6 bits(1898) | 0.0 | 360/372(97%) | 0/372(0%) | Plus/Minus |
Query 3 RKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IEYQRTLLIHSLCHLLRGYIVHIHHKTRVSSGIAILRFSTTVRYRL*SRFG*EVARHV*ISPSCGKKEDLIDSPLHIFNV*DWVAYVAVHVASFNVIREAPPNIEEAYTTTPPGKDSVETAPHGVSGWMTTPDRLGKLYRKLRKEFPQPLLFLWLQKHIAPV*GFFANHCVPLRKHVTQFRVQMGKQGRLVPQYQPIGDARNDR*IDLLLVKGIGDGGQDLPSQPCPIASDDSGFWDIGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAHAHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP 1118 RKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IEYQRTLLIHSLCHLLRGYIVHIHHKTRVSSGIAILRFSTTVRYRL*SRFG*EVARHV*ISPSCGKKE+LIDSPLHIFNV*DWVAYVAVHVASFNVIREAPPNIEEAYTTTPPGKDSVETAPHGVS WMTTPDR+GKLYRKLRKEFPQPLLFLWLQKHIAPV*GFFANHCVPLRKHVTQFRVQMGKQGRLVPQYQPIGDARNDR*IDLLLVKGIGDGGQDLPSQPCPIASDDSGFWDIGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAHAHQETYRKGR*EAT S+NFSPQP ++KPTPP G A++RP Subject 1453 RKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IEYQRTLLIHSLCHLLRGYIVHIHHKTRVSSGIAILRFSTTVRYRL*SRFG*EVARHV*ISPSCGKKENLIDSPLHIFNV*DWVAYVAVHVASFNVIREAPPNIEEAYTTTPPGKDSVETAPHGVSEWMTTPDRVGKLYRKLRKEFPQPLLFLWLQKHIAPV*GFFANHCVPLRKHVTQFRVQMGKQGRLVPQYQPIGDARNDR*IDLLLVKGIGDGGQDLPSQPCPIASDDSGFWDIGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAHAHQETYRKGR*EATASINFSPQPFVIKPTPPSGGAYKRP 2568
Range 3: 1455 to 2570 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
821.7 bits(1787) | 0.0 | 362/372(97%) | 0/372(0%) | Minus/Plus |
Query 1 GVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQCPKNRYRRWR*DTVGRGDLGLRRQCP*PRGGLFICRFEHHQ*AGIEGPIGLAFPFGHEIV*HVFSKGRNDSRKTLTQVRCVSEATGKGEAEGTLSGAFDTVFRVGQE*SSIR*RHAELFQRNLFPEVWWCMLLRYWGELHVSR*SWPRELPRMQPSPRR*RCEAENQ*DPLSFHSWGRFIRV*RPPNRSGFKVCILL*SRIAELRFQS*RGFYGGCVRYIPAAXXXXXXXXXXXGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFL 1116 GV H+QRVVLV* +AEGRNL T LLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQCPKNRYRRWR*DTVGRGDLGLRRQCP*PRGGLFICRFEHHQ*AGIEGPIGLAFPFGHEIV*HVFSKGRNDSRKTLTQVRCVSEATGKGEAEGTLSGAFDTVFR+GQE*SSIR*RHAELFQRNLFPEVWWCMLLRYWGELHVSR*SWPRELPRMQPSPRR*RCEAENQ*D LSFHSWGRFIRV*RPPNRSGFKVCILL*SRIAELRFQS*RGFYGGCVRYIPAAGGRGYG*EGCVGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFL Subject 1455 GVCMHHQRVVLV**RKAEGRNL*TPLLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQCPKNRYRRWR*DTVGRGDLGLRRQCP*PRGGLFICRFEHHQ*AGIEGPIGLAFPFGHEIV*HVFSKGRNDSRKTLTQVRCVSEATGKGEAEGTLSGAFDTVFRLGQE*SSIR*RHAELFQRNLFPEVWWCMLLRYWGELHVSR*SWPRELPRMQPSPRR*RCEAENQ*DSLSFHSWGRFIRV*RPPNRSGFKVCILL*SRIAELRFQS*RGFYGGCVRYIPAAGGRGYG*EGCVGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFL 2570
Range 4: 1454 to 2533 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
809.3 bits(1760) | 0.0 | 350/360(97%) | 0/360(0%) | Plus/Minus |
Query 38 NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNRIXXXXXXXXXXXXAAGIYRTHPP*NPRQLWNRNSAILDYSKIQTLKPLRLGGR*TRMNLPQLWKERGSH*FSASHL*RLGLGCIRGSSRGQL*RDT*SSPQYRRSIHHHTSGKRFR*NSSAWR*RMDDYS*PTRKTVSKAPERVPSASPFPVASETHRTCVRVFRESLRPFEKTCHTISCPNGKARPIGPSIPAYW*CSKRQMNRPPLG*GHWRRRPRSPLPTVSYRQRR*RFLGHWGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP 1117 NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNRIPTHPSYP*PLPPAAGIYRTHPP*NPRQLWNRNSAILDYSKIQTLKPLRLGGR*TRMNLPQLWKER SH*FSASHL*RLGLGCIRGSSRGQL*RDT*SSPQYRRSIHHHTSGKRFR*NSSAWR*RMDDYS*P+RKTVSKAPERVPSASPFPVASETHRTCVRVFRESLRPFEKTCHTISCPNGKARPIGPSIPAYW*CSKRQMNRPPLG*GHWRRRPRSPLPTVSYRQRR*RFLGHWGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSN V KFLPSA *TNTTLW C +TP Subject 1454 NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNRIPTHPSYP*PLPPAAGIYRTHPP*NPRQLWNRNSAILDYSKIQTLKPLRLGGR*TRMNLPQLWKERESH*FSASHL*RLGLGCIRGSSRGQL*RDT*SSPQYRRSIHHHTSGKRFR*NSSAWR*RMDDYS*PSRKTVSKAPERVPSASPFPVASETHRTCVRVFRESLRPFEKTCHTISCPNGKARPIGPSIPAYW*CSKRQMNRPPLG*GHWRRRPRSPLPTVSYRQRR*RFLGHWGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSNGVYKFLPSAFRY*TNTTLWWCIQTP 2533
Range 5: 1455 to 2570 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
780.9 bits(1698) | 0.0 | 369/372(99%) | 0/372(0%) | Plus/Minus |
Query 1 *EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNTNAPFLSIASATCCGDISYTSTIKPASALESQFCDSRLQ*DTDFEAASVRRSLDTYESPPAVERKRISLILRFTSLTSRTGLHTWQFTWPALT*YVKLPPISKKHTPPHLREKIPLKQLRMALADG*LLLTDSENCIEXXXXXXXXXXXXXXXRNTSHLCEGFSRIIASL*ENMSHNFVSKWESKADWSLNTSLLVMLETTDE*TSSWLRALATEAKISPPNRVLSPATIAVFGTLGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPMRIKKPTEKEDEKQRRXXXXXXXXXXXNQHHPLVVLTNA 1116 *EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNTNAPFLSIASATCCGDISYTSTIKPASALESQFCDSRLQ*DTDFEAASVRRSLDTYESPPAVERKRISLILRFTSLTSRTGLHTWQFTWPALT*YVKLPPISKKHTPPHLREKIPLKQLRMALA+G*LLLT+SENCIESSGKSSLSLSFSCGFRNTSHLCEGFSRIIASL*ENMSHNFVSKWESKADWSLNTSLLVMLETTDE*TSSWLRALATEAKISPPNRVLSPATIAVFGTLGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPMRIKKPTEKEDEKQRRL*ISPLSLSLLNQHHPLVV TNA Subject 1455 *EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNTNAPFLSIASATCCGDISYTSTIKPASALESQFCDSRLQ*DTDFEAASVRRSLDTYESPPAVERKRISLILRFTSLTSRTGLHTWQFTWPALT*YVKLPPISKKHTPPHLREKIPLKQLRMALANG*LLLTESENCIESSGKSSLSLSFSCGFRNTSHLCEGFSRIIASL*ENMSHNFVSKWESKADWSLNTSLLVMLETTDE*TSSWLRALATEAKISPPNRVLSPATIAVFGTLGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPMRIKKPTEKEDEKQRRL*ISPLSLSLLNQHHPLVVHTNA 2570
Range 6: 1454 to 1939 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
376.8 bits(816) | 0.0 | 153/162(94%) | 0/162(0%) | Minus/Plus |
Query 632 GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CAWALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISPMSQKPLSSLAIGHGWEGRSWPPSPMPLTKRRSIHLSFRASPIGWY*GTNRPCFPIWTRNCVTCFLKGTQ*FAKNPHTGAMCF*SH 1117 GR A P+GGVGL +G*GEKF D VASHLPFR*VS*CAWALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISPMSQKPLSSLAIGHGWEGRSWPPSPMPLTKRRSIHLSFRASPIGWY*GTNRPCFPIWTRNCVTCFLKGTQ*FAKNPHTGAMCF*SH Subject 1454 GRLYAPPEGGVGLITKG*GEKFIDAVASHLPFR*VS*CAWALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISPMSQKPLSSLAIGHGWEGRSWPPSPMPLTKRRSIHLSFRASPIGWY*GTNRPCFPIWTRNCVTCFLKGTQ*FAKNPHTGAMCF*SH 1939
Range 7: 2165 to 2569 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
325.9 bits(705) | 0.0 | 134/135(99%) | 0/135(0%) | Minus/Plus |
Query 2 KM*SGESMRSSFFPQLGEIHTCLATS*PKRLQSLYLTVVENRRIAIPELTRVLWWMCTIYPRSRWQRLWIRRVRWYSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFL 406 KM*SGESMR SFFPQLGEIHTCLATS*PKRLQSLYLTVVENRRIAIPELTRVLWWMCTIYPRSRWQRLWIRRVRWYSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFL Subject 2165 KM*SGESMRFSFFPQLGEIHTCLATS*PKRLQSLYLTVVENRRIAIPELTRVLWWMCTIYPRSRWQRLWIRRVRWYSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFL 2569
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 8
Range 1: 1638 to 2753 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
881.3 bits(1917) | 0.0 | 367/372(99%) | 0/372(0%) | Minus/Plus |
Query 3 RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSVGFLMRMGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPNVPKTAIVAGDRTRLGGEILASVANALNQEEVYSSVVSSITNRLVLRDQSALLSHLDTKLCDMFSQRDAMIREKPSHRCDVFLKPQEKERLRELFPELSIQFSESVRSSHPSANAMRSCFNGIFSRRCGGVCFFDIGGSFTYHVKAGHVNCHVCNPVLDVKDVKRRINEILFLSTAGGDSYVSSDLLTEAASKSVSYCSRESQNCDSRADAGFMVDVYDISPQQVAEAMDKKGALVFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFS 1118 RAFV TT+GWCWFNNERLRGEIYRRRCFSSSFSVGFLM MGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPNVPKTAIVAGDRTRLGGEILASVANALNQEEVYSSVVSSITNRLVLRDQSALLSHLDTKLCDMFSQRDAMIREKPSHRCDVFLKPQEKERLRELFPELSIQFS+SVRSSHP ANAMRSCFNGIFSRRCGGVCFFDIGGSFTYHVKAGHVNCHVCNPVLDVKDVKRRINEILFLSTAGGDSYVSSDLLTEAASKSVSYCSRESQNCDSRADAGFMVDVYDISPQQVAEAMDKKGALVFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFS Subject 1638 RAFVCTTRGWCWFNNERLRGEIYRRRCFSSSFSVGFLMHMGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPNVPKTAIVAGDRTRLGGEILASVANALNQEEVYSSVVSSITNRLVLRDQSALLSHLDTKLCDMFSQRDAMIREKPSHRCDVFLKPQEKERLRELFPELSIQFSDSVRSSHPFANAMRSCFNGIFSRRCGGVCFFDIGGSFTYHVKAGHVNCHVCNPVLDVKDVKRRINEILFLSTAGGDSYVSSDLLTEAASKSVSYCSRESQNCDSRADAGFMVDVYDISPQQVAEAMDKKGALVFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFS 2753
Range 2: 1638 to 2753 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
870.7 bits(1894) | 0.0 | 359/372(97%) | 0/372(0%) | Plus/Minus |
Query 3 RKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IEYQRTLLIHSLCHLLRGYIVHIHHKTRVSSGIAILRFSTTVRYRL*SRFG*EVARHV*ISPSCGKKEDLIDSPLHIFNV*DWVAYVAVHVASFNVIREAPPNIEEAYTTTPPGKDSVETAPHGVSGWMTTPDRLGKLYRKLRKEFPQPLLFLWLQKHIAPV*GFFANHCVPLRKHVTQFRVQMGKQGRLVPQYQPIGDARNDR*IDLLLVKGIGDGGQDLPSQPCPIASDDSGFWDIGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAHAHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP 1118 RKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IEYQRTLLIHSLCHLLRGYIVHIHHKTRVSSGIAILRFSTTVRYRL*SRFG*EVARHV*ISPSCGKKE+LIDSPLHIFNV*DWVAYVAVHVASFNVIREAPPNIEEAYTTTPPGKDSVETAPHGVS WMTTPDR+GKLYRKLRKEFPQPLLFLWLQKHIAPV*GFFANHCVPLRKHVTQFRVQMGKQGRLVPQYQPIGDARNDR*IDLLLVKGIGDGGQDLPSQPCPIASDDSGFWDIGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAH HQETYRKGR*EAT S+NFSPQP ++KPTPP G A++RP Subject 1638 RKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IEYQRTLLIHSLCHLLRGYIVHIHHKTRVSSGIAILRFSTTVRYRL*SRFG*EVARHV*ISPSCGKKENLIDSPLHIFNV*DWVAYVAVHVASFNVIREAPPNIEEAYTTTPPGKDSVETAPHGVSEWMTTPDRVGKLYRKLRKEFPQPLLFLWLQKHIAPV*GFFANHCVPLRKHVTQFRVQMGKQGRLVPQYQPIGDARNDR*IDLLLVKGIGDGGQDLPSQPCPIASDDSGFWDIGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAHVHQETYRKGR*EATASINFSPQPFVIKPTPPSGGAYKRP 2753
Range 3: 1640 to 2755 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
821.7 bits(1787) | 0.0 | 362/372(97%) | 0/372(0%) | Minus/Plus |
Query 1 GVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQCPKNRYRRWR*DTVGRGDLGLRRQCP*PRGGLFICRFEHHQ*AGIEGPIGLAFPFGHEIV*HVFSKGRNDSRKTLTQVRCVSEATGKGEAEGTLSGAFDTVFRVGQE*SSIR*RHAELFQRNLFPEVWWCMLLRYWGELHVSR*SWPRELPRMQPSPRR*RCEAENQ*DPLSFHSWGRFIRV*RPPNRSGFKVCILL*SRIAELRFQS*RGFYGGCVRYIPAAXXXXXXXXXXXGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFL 1116 GV H+QRVVLV* +AEGRNL T LLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQCPKNRYRRWR*DTVGRGDLGLRRQCP*PRGGLFICRFEHHQ*AGIEGPIGLAFPFGHEIV*HVFSKGRNDSRKTLTQVRCVSEATGKGEAEGTLSGAFDTVFR+GQE*SSIR*RHAELFQRNLFPEVWWCMLLRYWGELHVSR*SWPRELPRMQPSPRR*RCEAENQ*D LSFHSWGRFIRV*RPPNRSGFKVCILL*SRIAELRFQS*RGFYGGCVRYIPAAGGRGYG*EGCVGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFL Subject 1640 GVCMHHQRVVLV**RKAEGRNL*TPLLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQCPKNRYRRWR*DTVGRGDLGLRRQCP*PRGGLFICRFEHHQ*AGIEGPIGLAFPFGHEIV*HVFSKGRNDSRKTLTQVRCVSEATGKGEAEGTLSGAFDTVFRLGQE*SSIR*RHAELFQRNLFPEVWWCMLLRYWGELHVSR*SWPRELPRMQPSPRR*RCEAENQ*DSLSFHSWGRFIRV*RPPNRSGFKVCILL*SRIAELRFQS*RGFYGGCVRYIPAAGGRGYG*EGCVGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFL 2755
Range 4: 1639 to 2718 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
809.3 bits(1760) | 0.0 | 350/360(97%) | 0/360(0%) | Plus/Minus |
Query 38 NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNRIXXXXXXXXXXXXAAGIYRTHPP*NPRQLWNRNSAILDYSKIQTLKPLRLGGR*TRMNLPQLWKERGSH*FSASHL*RLGLGCIRGSSRGQL*RDT*SSPQYRRSIHHHTSGKRFR*NSSAWR*RMDDYS*PTRKTVSKAPERVPSASPFPVASETHRTCVRVFRESLRPFEKTCHTISCPNGKARPIGPSIPAYW*CSKRQMNRPPLG*GHWRRRPRSPLPTVSYRQRR*RFLGHWGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP 1117 NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNRIPTHPSYP*PLPPAAGIYRTHPP*NPRQLWNRNSAILDYSKIQTLKPLRLGGR*TRMNLPQLWKER SH*FSASHL*RLGLGCIRGSSRGQL*RDT*SSPQYRRSIHHHTSGKRFR*NSSAWR*RMDDYS*P+RKTVSKAPERVPSASPFPVASETHRTCVRVFRESLRPFEKTCHTISCPNGKARPIGPSIPAYW*CSKRQMNRPPLG*GHWRRRPRSPLPTVSYRQRR*RFLGHWGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSN V KFLPSA *TNTTLW C +TP Subject 1639 NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNRIPTHPSYP*PLPPAAGIYRTHPP*NPRQLWNRNSAILDYSKIQTLKPLRLGGR*TRMNLPQLWKERESH*FSASHL*RLGLGCIRGSSRGQL*RDT*SSPQYRRSIHHHTSGKRFR*NSSAWR*RMDDYS*PSRKTVSKAPERVPSASPFPVASETHRTCVRVFRESLRPFEKTCHTISCPNGKARPIGPSIPAYW*CSKRQMNRPPLG*GHWRRRPRSPLPTVSYRQRR*RFLGHWGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSNGVYKFLPSAFRY*TNTTLWWCIQTP 2718
Range 5: 1640 to 2755 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
777.3 bits(1690) | 0.0 | 368/372(99%) | 0/372(0%) | Plus/Minus |
Query 1 *EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNTNAPFLSIASATCCGDISYTSTIKPASALESQFCDSRLQ*DTDFEAASVRRSLDTYESPPAVERKRISLILRFTSLTSRTGLHTWQFTWPALT*YVKLPPISKKHTPPHLREKIPLKQLRMALADG*LLLTDSENCIEXXXXXXXXXXXXXXXRNTSHLCEGFSRIIASL*ENMSHNFVSKWESKADWSLNTSLLVMLETTDE*TSSWLRALATEAKISPPNRVLSPATIAVFGTLGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPMRIKKPTEKEDEKQRRXXXXXXXXXXXNQHHPLVVLTNA 1116 *EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNTNAPFLSIASATCCGDISYTSTIKPASALESQFCDSRLQ*DTDFEAASVRRSLDTYESPPAVERKRISLILRFTSLTSRTGLHTWQFTWPALT*YVKLPPISKKHTPPHLREKIPLKQLRMALA+G*LLLT+SENCIESSGKSSLSLSFSCGFRNTSHLCEGFSRIIASL*ENMSHNFVSKWESKADWSLNTSLLVMLETTDE*TSSWLRALATEAKISPPNRVLSPATIAVFGTLGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPM IKKPTEKEDEKQRRL*ISPLSLSLLNQHHPLVV TNA Subject 1640 *EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNTNAPFLSIASATCCGDISYTSTIKPASALESQFCDSRLQ*DTDFEAASVRRSLDTYESPPAVERKRISLILRFTSLTSRTGLHTWQFTWPALT*YVKLPPISKKHTPPHLREKIPLKQLRMALANG*LLLTESENCIESSGKSSLSLSFSCGFRNTSHLCEGFSRIIASL*ENMSHNFVSKWESKADWSLNTSLLVMLETTDE*TSSWLRALATEAKISPPNRVLSPATIAVFGTLGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPMCIKKPTEKEDEKQRRL*ISPLSLSLLNQHHPLVVHTNA 2755
Range 6: 1639 to 2124 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
375.0 bits(812) | 0.0 | 152/162(94%) | 0/162(0%) | Minus/Plus |
Query 632 GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CAWALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISPMSQKPLSSLAIGHGWEGRSWPPSPMPLTKRRSIHLSFRASPIGWY*GTNRPCFPIWTRNCVTCFLKGTQ*FAKNPHTGAMCF*SH 1117 GR A P+GGVGL +G*GEKF D VASHLPFR*VS*C WALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISPMSQKPLSSLAIGHGWEGRSWPPSPMPLTKRRSIHLSFRASPIGWY*GTNRPCFPIWTRNCVTCFLKGTQ*FAKNPHTGAMCF*SH Subject 1639 GRLYAPPEGGVGLITKG*GEKFIDAVASHLPFR*VS*CTWALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISPMSQKPLSSLAIGHGWEGRSWPPSPMPLTKRRSIHLSFRASPIGWY*GTNRPCFPIWTRNCVTCFLKGTQ*FAKNPHTGAMCF*SH 2124
Range 7: 2350 to 2754 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
325.9 bits(705) | 0.0 | 134/135(99%) | 0/135(0%) | Minus/Plus |
Query 2 KM*SGESMRSSFFPQLGEIHTCLATS*PKRLQSLYLTVVENRRIAIPELTRVLWWMCTIYPRSRWQRLWIRRVRWYSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFL 406 KM*SGESMR SFFPQLGEIHTCLATS*PKRLQSLYLTVVENRRIAIPELTRVLWWMCTIYPRSRWQRLWIRRVRWYSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFL Subject 2350 KM*SGESMRFSFFPQLGEIHTCLATS*PKRLQSLYLTVVENRRIAIPELTRVLWWMCTIYPRSRWQRLWIRRVRWYSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFL 2754
Grapevine leafroll associated virus 3 isolate 621, complete genome
Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 8
Range 1: 1638 to 2753 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
881.3 bits(1917) | 0.0 | 367/372(99%) | 0/372(0%) | Minus/Plus |
Query 3 RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSVGFLMRMGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPNVPKTAIVAGDRTRLGGEILASVANALNQEEVYSSVVSSITNRLVLRDQSALLSHLDTKLCDMFSQRDAMIREKPSHRCDVFLKPQEKERLRELFPELSIQFSESVRSSHPSANAMRSCFNGIFSRRCGGVCFFDIGGSFTYHVKAGHVNCHVCNPVLDVKDVKRRINEILFLSTAGGDSYVSSDLLTEAASKSVSYCSRESQNCDSRADAGFMVDVYDISPQQVAEAMDKKGALVFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFS 1118 RAFV TT+GWCWFNNERLRGEIYRRRCFSSSFSVGFLM MGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPNVPKTAIVAGDRTRLGGEILASVANALNQEEVYSSVVSSITNRLVLRDQSALLSHLDTKLCDMFSQRDAMIREKPSHRCDVFLKPQEKERLRELFPELSIQFS+SVRSSHP ANAMRSCFNGIFSRRCGGVCFFDIGGSFTYHVKAGHVNCHVCNPVLDVKDVKRRINEILFLSTAGGDSYVSSDLLTEAASKSVSYCSRESQNCDSRADAGFMVDVYDISPQQVAEAMDKKGALVFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFS Subject 1638 RAFVCTTRGWCWFNNERLRGEIYRRRCFSSSFSVGFLMHMGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPNVPKTAIVAGDRTRLGGEILASVANALNQEEVYSSVVSSITNRLVLRDQSALLSHLDTKLCDMFSQRDAMIREKPSHRCDVFLKPQEKERLRELFPELSIQFSDSVRSSHPFANAMRSCFNGIFSRRCGGVCFFDIGGSFTYHVKAGHVNCHVCNPVLDVKDVKRRINEILFLSTAGGDSYVSSDLLTEAASKSVSYCSRESQNCDSRADAGFMVDVYDISPQQVAEAMDKKGALVFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFS 2753
Range 2: 1638 to 2753 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
870.7 bits(1894) | 0.0 | 359/372(97%) | 0/372(0%) | Plus/Minus |
Query 3 RKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IEYQRTLLIHSLCHLLRGYIVHIHHKTRVSSGIAILRFSTTVRYRL*SRFG*EVARHV*ISPSCGKKEDLIDSPLHIFNV*DWVAYVAVHVASFNVIREAPPNIEEAYTTTPPGKDSVETAPHGVSGWMTTPDRLGKLYRKLRKEFPQPLLFLWLQKHIAPV*GFFANHCVPLRKHVTQFRVQMGKQGRLVPQYQPIGDARNDR*IDLLLVKGIGDGGQDLPSQPCPIASDDSGFWDIGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAHAHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP 1118 RKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IEYQRTLLIHSLCHLLRGYIVHIHHKTRVSSGIAILRFSTTVRYRL*SRFG*EVARHV*ISPSCGKKE+LIDSPLHIFNV*DWVAYVAVHVASFNVIREAPPNIEEAYTTTPPGKDSVETAPHGVS WMTTPDR+GKLYRKLRKEFPQPLLFLWLQKHIAPV*GFFANHCVPLRKHVTQFRVQMGKQGRLVPQYQPIGDARNDR*IDLLLVKGIGDGGQDLPSQPCPIASDDSGFWDIGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAH HQETYRKGR*EAT S+NFSPQP ++KPTPP G A++RP Subject 1638 RKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IEYQRTLLIHSLCHLLRGYIVHIHHKTRVSSGIAILRFSTTVRYRL*SRFG*EVARHV*ISPSCGKKENLIDSPLHIFNV*DWVAYVAVHVASFNVIREAPPNIEEAYTTTPPGKDSVETAPHGVSEWMTTPDRVGKLYRKLRKEFPQPLLFLWLQKHIAPV*GFFANHCVPLRKHVTQFRVQMGKQGRLVPQYQPIGDARNDR*IDLLLVKGIGDGGQDLPSQPCPIASDDSGFWDIGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAHVHQETYRKGR*EATASINFSPQPFVIKPTPPSGGAYKRP 2753
Range 3: 1640 to 2755 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
821.7 bits(1787) | 0.0 | 362/372(97%) | 0/372(0%) | Minus/Plus |
Query 1 GVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQCPKNRYRRWR*DTVGRGDLGLRRQCP*PRGGLFICRFEHHQ*AGIEGPIGLAFPFGHEIV*HVFSKGRNDSRKTLTQVRCVSEATGKGEAEGTLSGAFDTVFRVGQE*SSIR*RHAELFQRNLFPEVWWCMLLRYWGELHVSR*SWPRELPRMQPSPRR*RCEAENQ*DPLSFHSWGRFIRV*RPPNRSGFKVCILL*SRIAELRFQS*RGFYGGCVRYIPAAXXXXXXXXXXXGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFL 1116 GV H+QRVVLV* +AEGRNL T LLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQCPKNRYRRWR*DTVGRGDLGLRRQCP*PRGGLFICRFEHHQ*AGIEGPIGLAFPFGHEIV*HVFSKGRNDSRKTLTQVRCVSEATGKGEAEGTLSGAFDTVFR+GQE*SSIR*RHAELFQRNLFPEVWWCMLLRYWGELHVSR*SWPRELPRMQPSPRR*RCEAENQ*D LSFHSWGRFIRV*RPPNRSGFKVCILL*SRIAELRFQS*RGFYGGCVRYIPAAGGRGYG*EGCVGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFL Subject 1640 GVCMHHQRVVLV**RKAEGRNL*TPLLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQCPKNRYRRWR*DTVGRGDLGLRRQCP*PRGGLFICRFEHHQ*AGIEGPIGLAFPFGHEIV*HVFSKGRNDSRKTLTQVRCVSEATGKGEAEGTLSGAFDTVFRLGQE*SSIR*RHAELFQRNLFPEVWWCMLLRYWGELHVSR*SWPRELPRMQPSPRR*RCEAENQ*DSLSFHSWGRFIRV*RPPNRSGFKVCILL*SRIAELRFQS*RGFYGGCVRYIPAAGGRGYG*EGCVGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFL 2755
Range 4: 1639 to 2718 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
809.3 bits(1760) | 0.0 | 350/360(97%) | 0/360(0%) | Plus/Minus |
Query 38 NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNRIXXXXXXXXXXXXAAGIYRTHPP*NPRQLWNRNSAILDYSKIQTLKPLRLGGR*TRMNLPQLWKERGSH*FSASHL*RLGLGCIRGSSRGQL*RDT*SSPQYRRSIHHHTSGKRFR*NSSAWR*RMDDYS*PTRKTVSKAPERVPSASPFPVASETHRTCVRVFRESLRPFEKTCHTISCPNGKARPIGPSIPAYW*CSKRQMNRPPLG*GHWRRRPRSPLPTVSYRQRR*RFLGHWGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP 1117 NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNRIPTHPSYP*PLPPAAGIYRTHPP*NPRQLWNRNSAILDYSKIQTLKPLRLGGR*TRMNLPQLWKER SH*FSASHL*RLGLGCIRGSSRGQL*RDT*SSPQYRRSIHHHTSGKRFR*NSSAWR*RMDDYS*P+RKTVSKAPERVPSASPFPVASETHRTCVRVFRESLRPFEKTCHTISCPNGKARPIGPSIPAYW*CSKRQMNRPPLG*GHWRRRPRSPLPTVSYRQRR*RFLGHWGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSN V KFLPSA *TNTTLW C +TP Subject 1639 NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNRIPTHPSYP*PLPPAAGIYRTHPP*NPRQLWNRNSAILDYSKIQTLKPLRLGGR*TRMNLPQLWKERESH*FSASHL*RLGLGCIRGSSRGQL*RDT*SSPQYRRSIHHHTSGKRFR*NSSAWR*RMDDYS*PSRKTVSKAPERVPSASPFPVASETHRTCVRVFRESLRPFEKTCHTISCPNGKARPIGPSIPAYW*CSKRQMNRPPLG*GHWRRRPRSPLPTVSYRQRR*RFLGHWGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSNGVYKFLPSAFRY*TNTTLWWCIQTP 2718
Range 5: 1640 to 2755 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
777.3 bits(1690) | 0.0 | 368/372(99%) | 0/372(0%) | Plus/Minus |
Query 1 *EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNTNAPFLSIASATCCGDISYTSTIKPASALESQFCDSRLQ*DTDFEAASVRRSLDTYESPPAVERKRISLILRFTSLTSRTGLHTWQFTWPALT*YVKLPPISKKHTPPHLREKIPLKQLRMALADG*LLLTDSENCIEXXXXXXXXXXXXXXXRNTSHLCEGFSRIIASL*ENMSHNFVSKWESKADWSLNTSLLVMLETTDE*TSSWLRALATEAKISPPNRVLSPATIAVFGTLGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPMRIKKPTEKEDEKQRRXXXXXXXXXXXNQHHPLVVLTNA 1116 *EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNTNAPFLSIASATCCGDISYTSTIKPASALESQFCDSRLQ*DTDFEAASVRRSLDTYESPPAVERKRISLILRFTSLTSRTGLHTWQFTWPALT*YVKLPPISKKHTPPHLREKIPLKQLRMALA+G*LLLT+SENCIESSGKSSLSLSFSCGFRNTSHLCEGFSRIIASL*ENMSHNFVSKWESKADWSLNTSLLVMLETTDE*TSSWLRALATEAKISPPNRVLSPATIAVFGTLGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPM IKKPTEKEDEKQRRL*ISPLSLSLLNQHHPLVV TNA Subject 1640 *EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNTNAPFLSIASATCCGDISYTSTIKPASALESQFCDSRLQ*DTDFEAASVRRSLDTYESPPAVERKRISLILRFTSLTSRTGLHTWQFTWPALT*YVKLPPISKKHTPPHLREKIPLKQLRMALANG*LLLTESENCIESSGKSSLSLSFSCGFRNTSHLCEGFSRIIASL*ENMSHNFVSKWESKADWSLNTSLLVMLETTDE*TSSWLRALATEAKISPPNRVLSPATIAVFGTLGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPMCIKKPTEKEDEKQRRL*ISPLSLSLLNQHHPLVVHTNA 2755
Range 6: 1639 to 2124 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
375.0 bits(812) | 0.0 | 152/162(94%) | 0/162(0%) | Minus/Plus |
Query 632 GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CAWALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISPMSQKPLSSLAIGHGWEGRSWPPSPMPLTKRRSIHLSFRASPIGWY*GTNRPCFPIWTRNCVTCFLKGTQ*FAKNPHTGAMCF*SH 1117 GR A P+GGVGL +G*GEKF D VASHLPFR*VS*C WALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISPMSQKPLSSLAIGHGWEGRSWPPSPMPLTKRRSIHLSFRASPIGWY*GTNRPCFPIWTRNCVTCFLKGTQ*FAKNPHTGAMCF*SH Subject 1639 GRLYAPPEGGVGLITKG*GEKFIDAVASHLPFR*VS*CTWALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISPMSQKPLSSLAIGHGWEGRSWPPSPMPLTKRRSIHLSFRASPIGWY*GTNRPCFPIWTRNCVTCFLKGTQ*FAKNPHTGAMCF*SH 2124
Range 7: 2350 to 2754 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
325.9 bits(705) | 0.0 | 134/135(99%) | 0/135(0%) | Minus/Plus |
Query 2 KM*SGESMRSSFFPQLGEIHTCLATS*PKRLQSLYLTVVENRRIAIPELTRVLWWMCTIYPRSRWQRLWIRRVRWYSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFL 406 KM*SGESMR SFFPQLGEIHTCLATS*PKRLQSLYLTVVENRRIAIPELTRVLWWMCTIYPRSRWQRLWIRRVRWYSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFL Subject 2350 KM*SGESMRFSFFPQLGEIHTCLATS*PKRLQSLYLTVVENRRIAIPELTRVLWWMCTIYPRSRWQRLWIRRVRWYSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFL 2754
Grapevine leafroll associated virus 3 isolate WA MR, complete genome
Sequence ID: GU983863.1 Length: 18498 Number of Matches: 8
Range 1: 1638 to 2753 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
881.3 bits(1917) | 0.0 | 367/372(99%) | 0/372(0%) | Minus/Plus |
Query 3 RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSVGFLMRMGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPNVPKTAIVAGDRTRLGGEILASVANALNQEEVYSSVVSSITNRLVLRDQSALLSHLDTKLCDMFSQRDAMIREKPSHRCDVFLKPQEKERLRELFPELSIQFSESVRSSHPSANAMRSCFNGIFSRRCGGVCFFDIGGSFTYHVKAGHVNCHVCNPVLDVKDVKRRINEILFLSTAGGDSYVSSDLLTEAASKSVSYCSRESQNCDSRADAGFMVDVYDISPQQVAEAMDKKGALVFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFS 1118 RAFV TT+GWCWFNNERLRGEIYRRRCFSSSFSVGFLM MGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPNVPKTAIVAGDRTRLGGEILASVANALNQEEVYSSVVSSITNRLVLRDQSALLSHLDTKLCDMFSQRDAMIREKPSHRCDVFLKPQEKERLRELFPELSIQFS+SVRSSHP ANAMRSCFNGIFSRRCGGVCFFDIGGSFTYHVKAGHVNCHVCNPVLDVKDVKRRINEILFLSTAGGDSYVSSDLLTEAASKSVSYCSRESQNCDSRADAGFMVDVYDISPQQVAEAMDKKGALVFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFS Subject 1638 RAFVCTTRGWCWFNNERLRGEIYRRRCFSSSFSVGFLMHMGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPNVPKTAIVAGDRTRLGGEILASVANALNQEEVYSSVVSSITNRLVLRDQSALLSHLDTKLCDMFSQRDAMIREKPSHRCDVFLKPQEKERLRELFPELSIQFSDSVRSSHPFANAMRSCFNGIFSRRCGGVCFFDIGGSFTYHVKAGHVNCHVCNPVLDVKDVKRRINEILFLSTAGGDSYVSSDLLTEAASKSVSYCSRESQNCDSRADAGFMVDVYDISPQQVAEAMDKKGALVFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFS 2753
Range 2: 1638 to 2753 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
870.7 bits(1894) | 0.0 | 359/372(97%) | 0/372(0%) | Plus/Minus |
Query 3 RKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IEYQRTLLIHSLCHLLRGYIVHIHHKTRVSSGIAILRFSTTVRYRL*SRFG*EVARHV*ISPSCGKKEDLIDSPLHIFNV*DWVAYVAVHVASFNVIREAPPNIEEAYTTTPPGKDSVETAPHGVSGWMTTPDRLGKLYRKLRKEFPQPLLFLWLQKHIAPV*GFFANHCVPLRKHVTQFRVQMGKQGRLVPQYQPIGDARNDR*IDLLLVKGIGDGGQDLPSQPCPIASDDSGFWDIGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAHAHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP 1118 RKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IEYQRTLLIHSLCHLLRGYIVHIHHKTRVSSGIAILRFSTTVRYRL*SRFG*EVARHV*ISPSCGKKE+LIDSPLHIFNV*DWVAYVAVHVASFNVIREAPPNIEEAYTTTPPGKDSVETAPHGVS WMTTPDR+GKLYRKLRKEFPQPLLFLWLQKHIAPV*GFFANHCVPLRKHVTQFRVQMGKQGRLVPQYQPIGDARNDR*IDLLLVKGIGDGGQDLPSQPCPIASDDSGFWDIGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAH HQETYRKGR*EAT S+NFSPQP ++KPTPP G A++RP Subject 1638 RKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IEYQRTLLIHSLCHLLRGYIVHIHHKTRVSSGIAILRFSTTVRYRL*SRFG*EVARHV*ISPSCGKKENLIDSPLHIFNV*DWVAYVAVHVASFNVIREAPPNIEEAYTTTPPGKDSVETAPHGVSEWMTTPDRVGKLYRKLRKEFPQPLLFLWLQKHIAPV*GFFANHCVPLRKHVTQFRVQMGKQGRLVPQYQPIGDARNDR*IDLLLVKGIGDGGQDLPSQPCPIASDDSGFWDIGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAHVHQETYRKGR*EATASINFSPQPFVIKPTPPSGGAYKRP 2753
Range 3: 1640 to 2755 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
821.7 bits(1787) | 0.0 | 362/372(97%) | 0/372(0%) | Minus/Plus |
Query 1 GVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQCPKNRYRRWR*DTVGRGDLGLRRQCP*PRGGLFICRFEHHQ*AGIEGPIGLAFPFGHEIV*HVFSKGRNDSRKTLTQVRCVSEATGKGEAEGTLSGAFDTVFRVGQE*SSIR*RHAELFQRNLFPEVWWCMLLRYWGELHVSR*SWPRELPRMQPSPRR*RCEAENQ*DPLSFHSWGRFIRV*RPPNRSGFKVCILL*SRIAELRFQS*RGFYGGCVRYIPAAXXXXXXXXXXXGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFL 1116 GV H+QRVVLV* +AEGRNL T LLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQCPKNRYRRWR*DTVGRGDLGLRRQCP*PRGGLFICRFEHHQ*AGIEGPIGLAFPFGHEIV*HVFSKGRNDSRKTLTQVRCVSEATGKGEAEGTLSGAFDTVFR+GQE*SSIR*RHAELFQRNLFPEVWWCMLLRYWGELHVSR*SWPRELPRMQPSPRR*RCEAENQ*D LSFHSWGRFIRV*RPPNRSGFKVCILL*SRIAELRFQS*RGFYGGCVRYIPAAGGRGYG*EGCVGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFL Subject 1640 GVCMHHQRVVLV**RKAEGRNL*TPLLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQCPKNRYRRWR*DTVGRGDLGLRRQCP*PRGGLFICRFEHHQ*AGIEGPIGLAFPFGHEIV*HVFSKGRNDSRKTLTQVRCVSEATGKGEAEGTLSGAFDTVFRLGQE*SSIR*RHAELFQRNLFPEVWWCMLLRYWGELHVSR*SWPRELPRMQPSPRR*RCEAENQ*DSLSFHSWGRFIRV*RPPNRSGFKVCILL*SRIAELRFQS*RGFYGGCVRYIPAAGGRGYG*EGCVGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFL 2755
Range 4: 1639 to 2718 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
809.3 bits(1760) | 0.0 | 350/360(97%) | 0/360(0%) | Plus/Minus |
Query 38 NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNRIXXXXXXXXXXXXAAGIYRTHPP*NPRQLWNRNSAILDYSKIQTLKPLRLGGR*TRMNLPQLWKERGSH*FSASHL*RLGLGCIRGSSRGQL*RDT*SSPQYRRSIHHHTSGKRFR*NSSAWR*RMDDYS*PTRKTVSKAPERVPSASPFPVASETHRTCVRVFRESLRPFEKTCHTISCPNGKARPIGPSIPAYW*CSKRQMNRPPLG*GHWRRRPRSPLPTVSYRQRR*RFLGHWGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP 1117 NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNRIPTHPSYP*PLPPAAGIYRTHPP*NPRQLWNRNSAILDYSKIQTLKPLRLGGR*TRMNLPQLWKER SH*FSASHL*RLGLGCIRGSSRGQL*RDT*SSPQYRRSIHHHTSGKRFR*NSSAWR*RMDDYS*P+RKTVSKAPERVPSASPFPVASETHRTCVRVFRESLRPFEKTCHTISCPNGKARPIGPSIPAYW*CSKRQMNRPPLG*GHWRRRPRSPLPTVSYRQRR*RFLGHWGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSN V KFLPSA *TNTTLW C +TP Subject 1639 NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNRIPTHPSYP*PLPPAAGIYRTHPP*NPRQLWNRNSAILDYSKIQTLKPLRLGGR*TRMNLPQLWKERESH*FSASHL*RLGLGCIRGSSRGQL*RDT*SSPQYRRSIHHHTSGKRFR*NSSAWR*RMDDYS*PSRKTVSKAPERVPSASPFPVASETHRTCVRVFRESLRPFEKTCHTISCPNGKARPIGPSIPAYW*CSKRQMNRPPLG*GHWRRRPRSPLPTVSYRQRR*RFLGHWGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSNGVYKFLPSAFRY*TNTTLWWCIQTP 2718
Range 5: 1640 to 2755 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
777.3 bits(1690) | 0.0 | 368/372(99%) | 0/372(0%) | Plus/Minus |
Query 1 *EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNTNAPFLSIASATCCGDISYTSTIKPASALESQFCDSRLQ*DTDFEAASVRRSLDTYESPPAVERKRISLILRFTSLTSRTGLHTWQFTWPALT*YVKLPPISKKHTPPHLREKIPLKQLRMALADG*LLLTDSENCIEXXXXXXXXXXXXXXXRNTSHLCEGFSRIIASL*ENMSHNFVSKWESKADWSLNTSLLVMLETTDE*TSSWLRALATEAKISPPNRVLSPATIAVFGTLGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPMRIKKPTEKEDEKQRRXXXXXXXXXXXNQHHPLVVLTNA 1116 *EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNTNAPFLSIASATCCGDISYTSTIKPASALESQFCDSRLQ*DTDFEAASVRRSLDTYESPPAVERKRISLILRFTSLTSRTGLHTWQFTWPALT*YVKLPPISKKHTPPHLREKIPLKQLRMALA+G*LLLT+SENCIESSGKSSLSLSFSCGFRNTSHLCEGFSRIIASL*ENMSHNFVSKWESKADWSLNTSLLVMLETTDE*TSSWLRALATEAKISPPNRVLSPATIAVFGTLGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPM IKKPTEKEDEKQRRL*ISPLSLSLLNQHHPLVV TNA Subject 1640 *EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNTNAPFLSIASATCCGDISYTSTIKPASALESQFCDSRLQ*DTDFEAASVRRSLDTYESPPAVERKRISLILRFTSLTSRTGLHTWQFTWPALT*YVKLPPISKKHTPPHLREKIPLKQLRMALANG*LLLTESENCIESSGKSSLSLSFSCGFRNTSHLCEGFSRIIASL*ENMSHNFVSKWESKADWSLNTSLLVMLETTDE*TSSWLRALATEAKISPPNRVLSPATIAVFGTLGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPMCIKKPTEKEDEKQRRL*ISPLSLSLLNQHHPLVVHTNA 2755
Range 6: 1639 to 2124 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
375.0 bits(812) | 0.0 | 152/162(94%) | 0/162(0%) | Minus/Plus |
Query 632 GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CAWALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISPMSQKPLSSLAIGHGWEGRSWPPSPMPLTKRRSIHLSFRASPIGWY*GTNRPCFPIWTRNCVTCFLKGTQ*FAKNPHTGAMCF*SH 1117 GR A P+GGVGL +G*GEKF D VASHLPFR*VS*C WALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISPMSQKPLSSLAIGHGWEGRSWPPSPMPLTKRRSIHLSFRASPIGWY*GTNRPCFPIWTRNCVTCFLKGTQ*FAKNPHTGAMCF*SH Subject 1639 GRLYAPPEGGVGLITKG*GEKFIDAVASHLPFR*VS*CTWALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISPMSQKPLSSLAIGHGWEGRSWPPSPMPLTKRRSIHLSFRASPIGWY*GTNRPCFPIWTRNCVTCFLKGTQ*FAKNPHTGAMCF*SH 2124
Range 7: 2350 to 2754 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
325.9 bits(705) | 0.0 | 134/135(99%) | 0/135(0%) | Minus/Plus |
Query 2 KM*SGESMRSSFFPQLGEIHTCLATS*PKRLQSLYLTVVENRRIAIPELTRVLWWMCTIYPRSRWQRLWIRRVRWYSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFL 406 KM*SGESMR SFFPQLGEIHTCLATS*PKRLQSLYLTVVENRRIAIPELTRVLWWMCTIYPRSRWQRLWIRRVRWYSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFL Subject 2350 KM*SGESMRFSFFPQLGEIHTCLATS*PKRLQSLYLTVVENRRIAIPELTRVLWWMCTIYPRSRWQRLWIRRVRWYSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFL 2754
Grapevine leafroll associated virus 3, complete genome
Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 9
Range 1: 1638 to 2753 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
875.8 bits(1905) | 0.0 | 362/372(97%) | 0/372(0%) | Minus/Plus |
Query 3 RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSVGFLMRMGFRSLKAVRFAGTNILHIPSLNEERTFGWKSADVYLPNVPKTAIVAGDRTRLGGEILASVANALNQEEVYSSVVSSITNRLVLRDQSALLSHLDTKLCDMFSQRDAMIREKPSHRCDVFLKPQEKERLRELFPELSIQFSESVRSSHPSANAMRSCFNGIFSRRCGGVCFFDIGGSFTYHVKAGHVNCHVCNPVLDVKDVKRRINEILFLSTAGGDSYVSSDLLTEAASKSVSYCSRESQNCDSRADAGFMVDVYDISPQQVAEAMDKKGALVFDLALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFS 1118 RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFS+GFLM +GFRSLKA+RFAGTNILHIPSLNEERTFGWKS DVYLPNVPKTAIVAGDRTRLGGEILASVANALNQEEVYSSVVSSITNRLVLRDQSALLSHLDTKLCDMFSQRDAMIREKPSHRCDVFLKPQEKE+LRELFPELSIQFS+SVRSSHP ANAMRSCFNGIFSRRCG VCFFDIGGSFTYHVKAGHVNCHVCNPVLDVKDVKRRINEILFLSTAGGDSYVSSDLLTEAASKSVSYCSRESQNCDSRADAGFMVDVYDISPQQVAEAMDKKGALVFD+ALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFS Subject 1638 RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSIGFLMHLGFRSLKAIRFAGTNILHIPSLNEERTFGWKSGDVYLPNVPKTAIVAGDRTRLGGEILASVANALNQEEVYSSVVSSITNRLVLRDQSALLSHLDTKLCDMFSQRDAMIREKPSHRCDVFLKPQEKEKLRELFPELSIQFSDSVRSSHPFANAMRSCFNGIFSRRCGSVCFFDIGGSFTYHVKAGHVNCHVCNPVLDVKDVKRRINEILFLSTAGGDSYVSSDLLTEAASKSVSYCSRESQNCDSRADAGFMVDVYDISPQQVAEAMDKKGALVFDIALMFPVELLYGNGEVYLEELDTLVKREGDYLAYNVGQCGEMYEHSFSNVSGFFTFS 2753
Range 2: 1638 to 2753 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
778.6 bits(1693) | 0.0 | 321/372(86%) | 0/372(0%) | Plus/Minus |
Query 3 RKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH*RIEFLQVNFAVTIQQLHGEHKS*IEYQRTLLIHSLCHLLRGYIVHIHHKTRVSSGIAILRFSTTVRYRL*SRFG*EVARHV*ISPSCGKKEDLIDSPLHIFNV*DWVAYVAVHVASFNVIREAPPNIEEAYTTTPPGKDSVETAPHGVSGWMTTPDRLGKLYRKLRKEFPQPLLFLWLQKHIAPV*GFFANHCVPLRKHVTQFRVQMGKQGRLVPQYQPIGDARNDR*IDLLLVKGIGDGGQDLPSQPCPIASDDSGFWDIGEINICALPPKGALFIERWYV*YVRARKPDGFQRSKAHAHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP 1118 RKGEKPAYVREGMFIHLTTLTNIVGQVITFPLH RIEF QVNF VT+QQLHGEHKS +E QRTLLIHSLC+LLRGYIVHIHHKTR+ S IA+LRFSTTVR+RL*SRF *+V HV ISPSCGKKEDLIDSPLHIFNV*DW+AYV VH+ASF++IREAPPNIEEAYTTTPPGKDS+ETAPHG+S W+TTPDR+G+LYRK KEFPQ LLFL LQKHIAP+*GFFANHCVPLRKH+ QFRVQMGKQ RLVP YQ IGD RNDR*IDLLL+KGIGDGGQDLPSQPCPIASDDSGFWDIGEI++ ALPPKG LFIE WYV*YVRARKP+G RSKA HQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP Subject 1638 RKGEKPAYVREGMFIHLTTLTNIVGQVITFPLHQRIEFFQVNFTVTVQQLHGEHKSYVENQRTLLIHSLCYLLRGYIVHIHHKTRIGSRIAVLRFSTTVRHRL*SRFS*KVTGHVRISPSCGKKEDLIDSPLHIFNV*DWIAYVTVHMASFDMIREAPPNIEEAYTTTPPGKDSIETAPHGISEWVTTPDRVGELYRKFWKEFPQLLLFLRLQKHIAPM*GFFANHCVPLRKHIAQFRVQMGKQCRLVP*YQSIGDTRNDR*IDLLLIKGIGDGGQDLPSQPCPIASDDSGFWDIGEIDVSALPPKGTLFIE*WYV*YVRARKPNGL*RSKAKVHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP 2753
Range 3: 1640 to 2755 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
733.3 bits(1594) | 0.0 | 353/372(95%) | 0/372(0%) | Plus/Minus |
Query 1 *EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNSSTGNIRAKSNTNAPFLSIASATCCGDISYTSTIKPASALESQFCDSRLQ*DTDFEAASVRRSLDTYESPPAVERKRISLILRFTSLTSRTGLHTWQFTWPALT*YVKLPPISKKHTPPHLREKIPLKQLRMALADG*LLLTDSENCIEXXXXXXXXXXXXXXXRNTSHLCEGFSRIIASL*ENMSHNFVSKWESKADWSLNTSLLVMLETTDE*TSSWLRALATEAKISPPNRVLSPATIAVFGTLGR*TSALFHPKVRSSLSDGMCSMFVPANLTAFNDLKPMRIKKPTEKEDEKQRRXXXXXXXXXXXNQHHPLVVLTNA 1116 *EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYN+STGNIRA S T+APFLSIASATCCGDISYTSTIKPASALESQFCDSRLQ*DTDFEAASVRRSLDTYESPPAVERKRISLILRFTSLTSRTGLHT QFTWPALT*YVKLPPISKKHT PHL EKIPLKQLRMALA+G*LLLT+SENCIESSGKSSLS SFSCGFRNTSHLCEGFSRIIASL*EN+SHNFVSKWES ADWSLNTSLLV+LETTDE*TSS LRALATEAKISPPNRVLSPATIAVFGTLGR*TS LFHPKVRSSLSDGMCSMFVPANL AFNDLKP IKKP EKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNA Subject 1640 *EKVKNPLTLEKECSYISPH*PTL*AR*SPSLFTNVSSSSK*TSPLPYNNSTGNIRAMSKTSAPFLSIASATCCGDISYTSTIKPASALESQFCDSRLQ*DTDFEAASVRRSLDTYESPPAVERKRISLILRFTSLTSRTGLHT*QFTWPALT*YVKLPPISKKHTLPHLLEKIPLKQLRMALANG*LLLTESENCIESSGKSSLSFSFSCGFRNTSHLCEGFSRIIASL*ENISHNFVSKWESNADWSLNTSLLVILETTDE*TSS*LRALATEAKISPPNRVLSPATIAVFGTLGR*TSPLFHPKVRSSLSDGMCSMFVPANLMAFNDLKPRCIKKPIEKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNA 2755
Range 4: 1640 to 2755 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
696.2 bits(1513) | 0.0 | 320/372(86%) | 0/372(0%) | Minus/Plus |
Query 1 GVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLFGRFLDAHGL*IVESRQVCGHEHTTHTIAQ*RAHLWVEERRCLSPQCPKNRYRRWR*DTVGRGDLGLRRQCP*PRGGLFICRFEHHQ*AGIEGPIGLAFPFGHEIV*HVFSKGRNDSRKTLTQVRCVSEATGKGEAEGTLSGAFDTVFRVGQE*SSIR*RHAELFQRNLFPEVWWCMLLRYWGELHVSR*SWPRELPRMQPSPRR*RCEAENQ*DPLSFHSWGRFIRV*RPPNRSGFKVCILL*SRIAELRFQS*RGFYGGCVRYIPAAXXXXXXXXXXXGIRFSSYVPRGAVVW*RRSLLGGTRYVSEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFL 1116 GVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLF RFLDA L*IV+ VCGHEHTTHTI Q*RA+LWVEERR LSPQCPKNRYRRWR*DTVGRGDLGLRRQCP* RGGLFI RFE+HQ* GI+GPIG+AFPFGHEIV +VFSKGRNDSRKTLT VRCVSEA GKGEAEGTLS FDTV R+GQE*S IR* HAELFQ NLF EVW CMLLRYWGELHVS SWP EL RMQ SPRR*RCEAENQ*DPLSFHSWGRF+RV P N SGFKVC+LL*SRIAELRF S GFYGGCVRYIPAAG RGYG*EGC G R SSYVPRG VV *R SLLG TRYV EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFL Subject 1640 GVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLFDRFLDAPWL*IVKGH*VCGHEHTTHTITQ*RAYLWVEERRRLSPQCPKNRYRRWR*DTVGRGDLGLRRQCP*SRGGLFIGRFEYHQ*TGIKGPIGIAFPFGHEIVRYVFSKGRNDSRKTLT*VRCVSEAAGKGEAEGTLSRTFDTVLRLGQE*SPIR*CHAELFQWNLFQEVW*CMLLRYWGELHVSCQSWPCELSRMQSSPRR*RCEAENQ*DPLSFHSWGRFVRVQ*PSN*SGFKVCVLL*SRIAELRF*SRCGFYGGCVRYIPAAGSRGYG*EGCAGFRHSSYVPRGVVVR*R*SLLGRTRYVGEEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFL 2755
Range 5: 1639 to 2538 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
594.9 bits(1292) | 0.0 | 257/300(86%) | 0/300(0%) | Plus/Minus |
Query 218 AAGIYRTHPP*NPRQLWNRNSAILDYSKIQTLKPLRLGGR*TRMNLPQLWKERGSH*FSASHL*RLGLGCIRGSSRGQL*RDT*SSPQYRRSIHHHTSGKRFR*NSSAWR*RMDDYS*PTRKTVSKAPERVPSASPFPVASETHRTCVRVFRESLRPFEKTCHTISCPNGKARPIGPSIPAYW*CSKRQMNRPPLG*GHWRRRPRSPLPTVSYRQRR*RFLGHWGDKHLRSSTQRCALH*AMVCVVCSCPQT*RLSTI*SPCASRNLPKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP 1117 AAGIYRTHPP*NP +L NR+SAILDYSK QTLKPL+L G TR NLPQLWKERGSH*FSASHL*RLGL CIR SS GQL* DT*SSPQYRRSIH+HTS KRF *NSSAW *RM DYS*P+R+TVSK ERVPSASPFP ASETHRT VRVFRESLRPFEKT TISCPNGKA PIGP IP YW* SKR MNRPPL *GHWRRRPRSPLPTVSYRQRR*RFLGHWGD+ LRSSTQR ALH* MVCVVCSCPQT* TI*S ASRNL KRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP Subject 1639 AAGIYRTHPP*NPHRL*NRSSAILDYSKTQTLKPLQLEGHWTRTNLPQLWKERGSH*FSASHL*RLGLDCIRDSSHGQL*HDT*SSPQYRRSIHYHTSWKRFH*NSSAWH*RMGDYS*PSRRTVSKVLERVPSASPFPAASETHRTYVRVFRESLRPFEKTYRTISCPNGKAMPIGPLIPVYW*YSKRPMNRPPLD*GHWRRRPRSPLPTVSYRQRR*RFLGHWGDRRLRSSTQRYALH*VMVCVVCSCPQT*WPLTI*SQGASRNLSKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP 2538
Range 6: 2578 to 2718 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
103.2 bits(219) | 0.0 | 41/47(87%) | 0/47(0%) | Plus/Minus |
Query 38 NVHTSHHTDQHCRPGNHLPSSLTYRVPPSKLRRYHTTAPRGT*ELNR 178 NVHTSHHTDQHCRPGNHLPSS TYRV PSKL RY TT PRGT*EL R Subject 2578 NVHTSHHTDQHCRPGNHLPSSPTYRVLPSKLHRYRTTTPRGT*ELCR 2718
Range 7: 1639 to 2121 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
348.8 bits(755) | 0.0 | 144/161(89%) | 0/161(0%) | Minus/Plus |
Query 635 GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CAWALDR*KPSGLRARTYYTYHRSMKSAPLGGRAQMFISPMSQKPLSSLAIGHGWEGRSWPPSPMPLTKRRSIHLSFRASPIGWY*GTNRPCFPIWTRNCVTCFLKGTQ*FAKNPHTGAMCF*S 1117 GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*C ALDR*+P GLRARTYYTYH SMKS PLGGRA+ ISPMSQKPLSSLAIGHGWEGRSWPPSPMPL KRRSIH SFR SPI WY*GTNR CFPIWTRNC CFLKGTQ*FAKNPH GAMCF*S Subject 1639 GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CTLALDR*RPLGLRARTYYTYHHSMKSVPLGGRAETSISPMSQKPLSSLAIGHGWEGRSWPPSPMPLIKRRSIHRSFRVSPIDWY*GTNRHCFPIWTRNCAICFLKGTQ*FAKNPHIGAMCF*S 2121
Range 8: 2350 to 2754 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
276.5 bits(597) | 0.0 | 118/135(87%) | 0/135(0%) | Minus/Plus |
Query 2 KM*SGESMRSSFFPQLGEIHTCLATS*PKRLQSLYLTVVENRRIAIPELTRVLWWMCTIYPRSRWQRLWIRRVRWYSI*LLCSPWSCCMVTAKFTWRNSIR**RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFL 406 KM*SGESMRSSFFPQLGEI TC T * KRLQSL LTVVENRR AI E RVLWWMCTIYPRSR QRLWIRRVRW+S *LLCSPWSCC VT KFTW+NSIR *RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFL Subject 2350 KM*SGESMRSSFFPQLGEIRTCPVTF*LKRLQSLCLTVVENRRTAILEPMRVLWWMCTIYPRSR*QRLWIRRVRWFST*LLCSPWSCCTVTVKFTWKNSIRW*RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFL 2754
Nucleotide Sequence (657 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
391.9 | 2746.8 | 75% | 4.348e-107 | 78% | HQ130300.1 | |
390.5 | 2729.8 | 75% | 1.128e-106 | 78% | HQ130299.1 | |
390.5 | 2740.8 | 75% | 1.128e-106 | 78% | HQ130308.1 | |
390.5 | 2727.1 | 75% | 1.128e-106 | 78% | HQ130315.1 | |
390.5 | 2727.1 | 75% | 1.128e-106 | 78% | HQ130316.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 6 18 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130300.1 Length: 4711 Number of Matches: 14
Range 1: 1271 to 1795 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
391.9 bits(849) | 0.0 | 163/175(93%) | 0/175(0%) | Plus/Plus |
Query 5 RADFPGTQSLSVTLSIASNKLASGLMGNDAESSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKYLGGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFFKGFNKISLKKT 529 RADFPGTQSLSVTLS+ASNKLASGLMG+DA SSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKY+GGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFF+ LKK+ Subject 1271 RADFPGTQSLSVTLSVASNKLASGLMGSDAVSSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKYIGGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFFRDILLKPLKKS 1795
Range 2: 1269 to 1763 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
377.3 bits(817) | 0.0 | 161/165(98%) | 0/165(0%) | Minus/Minus |
Query 3 *RRCALGKLTVTLYALHPVSSLRNNQGRGSDLRTLSLLFCRYASNFWVDH*RPFAYK*N*QWSVLTHRLRSLVLRTTPRSNCSTCSSYQW*SPLLSHLSISYRR*LPVLSRVCCDTRRTRSNLPRRSSA*TTMILRRFP*DLKLTYYWLSIT*LISFEFRESLLY 497 *RRCALGKLTVTLYALHPVSSLRNNQGRGSDLRTLSLLFCRYASNFWVDH*RPFAYK*N*QWSVLTHRLRSLVLRTTPRSNCSTCSSYQW*SPLLSHL ISYRR*LPVLSRVCCDTRRTRSNLPRRSSA*TTMILRRFP*DLKLTYYWL IT*LISFE+RESLL+ Subject 1269 *RRCALGKLTVTLYALHPVSSLRNNQGRGSDLRTLSLLFCRYASNFWVDH*RPFAYK*N*QWSVLTHRLRSLVLRTTPRSNCSTCSSYQW*SPLLSHLCISYRR*LPVLSRVCCDTRRTRSNLPRRSSA*TTMILRRFP*DLKLTYYWLPIT*LISFEYRESLLF 1763
Range 3: 1267 to 1791 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
368.6 bits(798) | 0.0 | 164/175(94%) | 0/175(0%) | Minus/Minus |
Query 1 FFRDILLKPLKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTVVCANPSTTFTCITYDASFQLFDV*FLPVVISTPLPPKYFLQKITSRPK*GLL*HTPHSK*SPASFISINDDDSASFPIRPEANLLLAIDNVTDKL*VPGKSALC 525 FF+ LKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTVVCANPSTTFTCITYDASFQLFDV*FLPVVISTPLPP YFLQKITSRPK*GLL*HTPHSK*SPASFISINDDD+AS PIRPEANLLLA DNVTDKL*VPGKSALC Subject 1267 FFKGFNKISLKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTVVCANPSTTFTCITYDASFQLFDV*FLPVVISTPLPPMYFLQKITSRPK*GLL*HTPHSK*SPASFISINDDDTASLPIRPEANLLLATDNVTDKL*VPGKSALC 1791
Range 4: 1268 to 1762 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
336.9 bits(729) | 0.0 | 159/165(96%) | 0/165(0%) | Minus/Minus |
Query 2 EEDAHWGN*Q*PYTHYTQFRV*ETTRVEVLIYGHYLCYFVDTRPIFG*TTNVRLRISRINSGLC*PIDYVHLYYXXXXXXXXXXXXLTSGDLHSSPT*VFPTEDNFPS*VGFVVTHAALEVISRVVHQHKRR*FCVVSHKT*S*LITGYR*RN**ALSSGKVCSM 496 +EDAHWGN*Q*PYTHYTQFRV*ETTRVEVLIYGHYLCYFVDTRPIFG*TTNVRLRISRINSGLC*PIDYVHLYYVRRLVPIVRRVVLTSGDLHSSPT VFPTEDNFPS*VGFVVTHAALEVISRVVHQHKRR*+CV SHKT*S*LITGYR*RN**ALS+GKVCS+ Subject 1268 KEDAHWGN*Q*PYTHYTQFRV*ETTRVEVLIYGHYLCYFVDTRPIFG*TTNVRLRISRINSGLC*PIDYVHLYYVRRLVPIVRRVVLTSGDLHSSPTYVFPTEDNFPS*VGFVVTHAALEVISRVVHQHKRR*YCVASHKT*S*LITGYR*RN**ALSTGKVCSL 1762
Range 5: 1441 to 1761 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
260.4 bits(562) | 0.0 | 106/107(99%) | 0/107(0%) | Plus/Plus |
Query 175 TGSYLL*EILRWERSGDHHW*ELHVEQLERGVVRNTSERSRWVSTDHC*FYLYANGR*WSTQKLDAYLQNNKDSVRRSEPLPWLFLRLETGCNAYKVTVSFPSAHLL 495 TGSYLL*EI RWERSGDHHW*ELHVEQLERGVVRNTSERSRWVSTDHC*FYLYANGR*WSTQKLDAYLQNNKDSVRRSEPLPWLFLRLETGCNAYKVTVSFPSAHLL Subject 1441 TGSYLL*EIHRWERSGDHHW*ELHVEQLERGVVRNTSERSRWVSTDHC*FYLYANGR*WSTQKLDAYLQNNKDSVRRSEPLPWLFLRLETGCNAYKVTVSFPSAHLL 1761
Range 6: 1267 to 1386 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
73.9 bits(155) | 0.0 | 36/40(90%) | 0/40(0%) | Plus/Plus |
Query 1 T*SRLSRNSKLISYVIDSQ**VSFRSYGKRRRIIVVYADE 120 T SRLSR SKLISYVI SQ**VSFRSYGKRR IIVVYADE Subject 1267 TKSRLSRYSKLISYVIGSQ**VSFRSYGKRRSIIVVYADE 1386
Range 7: 1272 to 1502 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
167.9 bits(360) | 0.0 | 74/77(96%) | 0/77(0%) | Plus/Plus |
Query 6 EQTFPELKAYQLRYR*PVIS*LQVLWETTQNHRRLC**TTREITSSAACVTTNPT*DGKLSSVGNT*VGEEWRSPLV 236 EQTFP LKAYQLRYR*PVIS*LQVLWE TQ HRRLC**TTREITSSAACVTTNPT*DGKLSSVGNT*VGEEWRSPLV Subject 1272 EQTFPVLKAYQLRYR*PVIS*LQVLWEATQYHRRLC**TTREITSSAACVTTNPT*DGKLSSVGNT*VGEEWRSPLV 1502
Range 8: 1557 to 1799 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
155.0 bits(332) | 0.0 | 72/81(89%) | 0/81(0%) | Plus/Plus |
Query 291 *SMG*HRPLLILLIRKRTLVVYPKIGRVSTK*QR*CP*IRTSTLVVSQTRNWV*CV*GHC*FPQCASSSKVSIRYP*RRRA 533 *SMG*HRPLLILLIRKRTLVVYPKIGRVSTK*QR*CP*IRTSTLVVSQTRNWV*CV*GHC*FPQCASS +S *R R+ Subject 1557 *SMG*HRPLLILLIRKRTLVVYPKIGRVSTK*QR*CP*IRTSTLVVSQTRNWV*CV*GHC*FPQCASSLGISY*NL*RNRS 1799
Range 9: 1625 to 1789 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
107.8 bits(229) | 0.0 | 47/55(85%) | 0/55(0%) | Plus/Minus |
Query 493 LQRFQ*DIPKEDAHWGN*Q*PYTHYTQFRD*ETTNTEHPIYGH*LR*FVDTRPIF 657 LQRFQ*DIPKEDAHWGN*Q*PYTHYTQFR *ETT E IYGH L FVDTRPIF Subject 1625 LQRFQ*DIPKEDAHWGN*Q*PYTHYTQFRV*ETTRVEVLIYGHYLCYFVDTRPIF 1789
Range 10: 1625 to 1792 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
104.6 bits(222) | 0.0 | 45/56(80%) | 0/56(0%) | Minus/Plus |
Query 490 KYWTCIYKLTQLVSVDRMLCIGCFSVSKLGVMRIRSLLVSPVRVFFRDILLKPLKK 657 K WT IYK+T++VSVD+ L GCFS SKLGVMRIRSLLVSPVR+FFRDILLKPLKK Subject 1625 KNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFFRDILLKPLKK 1792
Range 11: 1629 to 1790 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
104.2 bits(221) | 0.0 | 46/54(85%) | 0/54(0%) | Plus/Minus |
Query 492 SSKVSIRYP*RRRALGKLTVTLYALHPVSRLRNNQYRASDLRTLTALICRYTSN 653 SSKVSIRYP*RR ALGKLTVTLYALHPVS LRNNQ R SDLRTL+ L CRY SN Subject 1629 SSKVSIRYP*RRCALGKLTVTLYALHPVSSLRNNQGRGSDLRTLSLLFCRYASN 1790
Range 12: 1629 to 1790 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
103.7 bits(220) | 0.0 | 47/54(87%) | 0/54(0%) | Minus/Plus |
Query 492 IGRVSTN*RS*CP*IGCSVLVVSQSRNWV*CV*GHC*FPQCASSLGISY*NL*R 653 IGRVST *+ *CP*I S LVVSQ+RNWV*CV*GHC*FPQCASSLGISY*NL*R Subject 1629 IGRVSTK*QR*CP*IRTSTLVVSQTRNWV*CV*GHC*FPQCASSLGISY*NL*R 1790
Range 13: 1630 to 1791 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
102.8 bits(218) | 0.0 | 45/54(83%) | 0/54(0%) | Minus/Plus |
Query 491 LDVYLQINAVSVRRSDALYWLFLSLETGCNAYKVTVSFPSARLL*GYLIETFEE 652 LD YLQ N SVRRS+ L WLFL LETGCNAYKVTVSFPSA LL*GYLIETFEE Subject 1630 LDAYLQNNKDSVRRSEPLPWLFLRLETGCNAYKVTVSFPSAHLL*GYLIETFEE 1791
Range 14: 1627 to 1791 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
91.8 bits(194) | 0.0 | 43/55(78%) | 0/55(0%) | Plus/Minus |
Query 491 FFKGFNKISLKKTRTGETNSDLIRITPSFETEKQPIQSIRSTDTNCVNL*IHVQY 655 FFKGFNKISLKK RTGETNSDLIRITPSFE+EKQP STDT V L*I VQ+ Subject 1627 FFKGFNKISLKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQF 1791
Grapevine leafroll associated virus 3 isolate 6 15 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130299.1 Length: 4711 Number of Matches: 14
Range 1: 1271 to 1795 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
390.5 bits(846) | 0.0 | 164/175(94%) | 0/175(0%) | Plus/Plus |
Query 5 RADFPGTQSLSVTLSIASNKLASGLMGNDAESSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKYLGGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFFKGFNKISLKKT 529 RADFP TQSLSVTLSIASNKLASGLMG+DA SSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKYLGGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFF+ LKK+ Subject 1271 RADFPNTQSLSVTLSIASNKLASGLMGSDAVSSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKYLGGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFFRDILLKPLKKS 1795
Range 2: 1269 to 1763 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
375.0 bits(812) | 0.0 | 161/165(98%) | 0/165(0%) | Minus/Minus |
Query 3 *RRCALGKLTVTLYALHPVSSLRNNQGRGSDLRTLSLLFCRYASNFWVDH*RPFAYK*N*QWSVLTHRLRSLVLRTTPRSNCSTCSSYQW*SPLLSHLSISYRR*LPVLSRVCCDTRRTRSNLPRRSSA*TTMILRRFP*DLKLTYYWLSIT*LISFEFRESLLY 497 *RRCALGKLTVTLYALHPVSSLRNNQGRGSD RTLSLLFCRYASNFWVDH*RPFAYK*N*QWSVLTHRLRSLVLRTTPRSNCSTCSSYQW*SPLLSHLSISYRR*LPVLSRVCCDTRRTRSNLPRRSSA*TTMILRRFP*DLKLTYYWLSIT*LISFE+ ESLL+ Subject 1269 *RRCALGKLTVTLYALHPVSSLRNNQGRGSDPRTLSLLFCRYASNFWVDH*RPFAYK*N*QWSVLTHRLRSLVLRTTPRSNCSTCSSYQW*SPLLSHLSISYRR*LPVLSRVCCDTRRTRSNLPRRSSA*TTMILRRFP*DLKLTYYWLSIT*LISFEYWESLLF 1763
Range 3: 1267 to 1791 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
369.0 bits(799) | 0.0 | 165/175(94%) | 0/175(0%) | Minus/Minus |
Query 1 FFRDILLKPLKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTVVCANPSTTFTCITYDASFQLFDV*FLPVVISTPLPPKYFLQKITSRPK*GLL*HTPHSK*SPASFISINDDDSASFPIRPEANLLLAIDNVTDKL*VPGKSALC 525 FF+ LKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTVVCANPSTTFTCITYDASFQLFDV*FLPVVISTPLPPKYFLQKITSRPK*GLL*HTPHSK*SPASFISINDDD+AS PIRPEANLLLAIDNVTDKL*V GKSALC Subject 1267 FFKGFNKISLKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTVVCANPSTTFTCITYDASFQLFDV*FLPVVISTPLPPKYFLQKITSRPK*GLL*HTPHSK*SPASFISINDDDTASLPIRPEANLLLAIDNVTDKL*VLGKSALC 1791
Range 4: 1268 to 1762 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
335.6 bits(726) | 0.0 | 159/165(96%) | 0/165(0%) | Minus/Minus |
Query 2 EEDAHWGN*Q*PYTHYTQFRV*ETTRVEVLIYGHYLCYFVDTRPIFG*TTNVRLRISRINSGLC*PIDYVHLYYXXXXXXXXXXXXLTSGDLHSSPT*VFPTEDNFPS*VGFVVTHAALEVISRVVHQHKRR*FCVVSHKT*S*LITGYR*RN**ALSSGKVCSM 496 +EDAHWGN*Q*PYTHYTQFRV*ETTRVEVLI+GHYLCYFVDTRPIFG*TTNVRLRISRINSGLC*PIDYVHLYYVRRLVPIVRRVVLTSGDLHSSPT*VFPTEDNFPS*VGFVVTHAALEVISRVVHQHKRR*+CV SHKT*S*LITGYR*RN**ALS GKVCS+ Subject 1268 KEDAHWGN*Q*PYTHYTQFRV*ETTRVEVLIHGHYLCYFVDTRPIFG*TTNVRLRISRINSGLC*PIDYVHLYYVRRLVPIVRRVVLTSGDLHSSPT*VFPTEDNFPS*VGFVVTHAALEVISRVVHQHKRR*YCVASHKT*S*LITGYR*RN**ALSIGKVCSL 1762
Range 5: 1441 to 1761 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
260.4 bits(562) | 0.0 | 106/107(99%) | 0/107(0%) | Plus/Plus |
Query 175 TGSYLL*EILRWERSGDHHW*ELHVEQLERGVVRNTSERSRWVSTDHC*FYLYANGR*WSTQKLDAYLQNNKDSVRRSEPLPWLFLRLETGCNAYKVTVSFPSAHLL 495 TGSYLL*EILRWERSGDHHW*ELHVEQLERGVVRNTSERSRWVSTDHC*FYLYANGR*WSTQKLDAYLQNNKDSVR SEPLPWLFLRLETGCNAYKVTVSFPSAHLL Subject 1441 TGSYLL*EILRWERSGDHHW*ELHVEQLERGVVRNTSERSRWVSTDHC*FYLYANGR*WSTQKLDAYLQNNKDSVRGSEPLPWLFLRLETGCNAYKVTVSFPSAHLL 1761
Range 6: 1267 to 1386 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
75.3 bits(158) | 0.0 | 36/40(90%) | 0/40(0%) | Plus/Plus |
Query 1 T*SRLSRNSKLISYVIDSQ**VSFRSYGKRRRIIVVYADE 120 T SRLS+ SKLISYVIDSQ**VSFRSYGKRR IIVVYADE Subject 1267 TKSRLSQYSKLISYVIDSQ**VSFRSYGKRRSIIVVYADE 1386
Range 7: 1272 to 1502 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
167.4 bits(359) | 0.0 | 74/77(96%) | 0/77(0%) | Plus/Plus |
Query 6 EQTFPELKAYQLRYR*PVIS*LQVLWETTQNHRRLC**TTREITSSAACVTTNPT*DGKLSSVGNT*VGEEWRSPLV 236 EQTFP LKAYQLRYR*PVIS*LQVLWE TQ HRRLC**TTREITSSAACVTTNPT*DGKLSSVGNT*VGEEWRSPLV Subject 1272 EQTFPILKAYQLRYR*PVIS*LQVLWEATQYHRRLC**TTREITSSAACVTTNPT*DGKLSSVGNT*VGEEWRSPLV 1502
Range 8: 1557 to 1799 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
152.7 bits(327) | 0.0 | 71/81(88%) | 0/81(0%) | Plus/Plus |
Query 291 *SMG*HRPLLILLIRKRTLVVYPKIGRVSTK*QR*CP*IRTSTLVVSQTRNWV*CV*GHC*FPQCASSSKVSIRYP*RRRA 533 *SMG*HRPLLILLIRKRTLVVYPKIGRVSTK*QR*CP IRTSTLVVSQTRNWV*CV*GHC*FPQCASS +S *R R+ Subject 1557 *SMG*HRPLLILLIRKRTLVVYPKIGRVSTK*QR*CPWIRTSTLVVSQTRNWV*CV*GHC*FPQCASSLGISY*NL*RNRS 1799
Range 9: 1625 to 1789 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
105.5 bits(224) | 0.0 | 46/55(84%) | 0/55(0%) | Plus/Minus |
Query 493 LQRFQ*DIPKEDAHWGN*Q*PYTHYTQFRD*ETTNTEHPIYGH*LR*FVDTRPIF 657 LQRFQ*DIPKEDAHWGN*Q*PYTHYTQFR *ETT E I+GH L FVDTRPIF Subject 1625 LQRFQ*DIPKEDAHWGN*Q*PYTHYTQFRV*ETTRVEVLIHGHYLCYFVDTRPIF 1789
Range 10: 1625 to 1792 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
104.6 bits(222) | 0.0 | 45/56(80%) | 0/56(0%) | Minus/Plus |
Query 490 KYWTCIYKLTQLVSVDRMLCIGCFSVSKLGVMRIRSLLVSPVRVFFRDILLKPLKK 657 K WT IYK+T++VSVD+ L GCFS SKLGVMRIRSLLVSPVR+FFRDILLKPLKK Subject 1625 KNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFFRDILLKPLKK 1792
Range 11: 1629 to 1790 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.4 bits(215) | 0.0 | 46/54(85%) | 0/54(0%) | Minus/Plus |
Query 492 IGRVSTN*RS*CP*IGCSVLVVSQSRNWV*CV*GHC*FPQCASSLGISY*NL*R 653 IGRVST *+ *CP I S LVVSQ+RNWV*CV*GHC*FPQCASSLGISY*NL*R Subject 1629 IGRVSTK*QR*CPWIRTSTLVVSQTRNWV*CV*GHC*FPQCASSLGISY*NL*R 1790
Range 12: 1629 to 1790 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.0 bits(214) | 0.0 | 45/54(83%) | 0/54(0%) | Plus/Minus |
Query 492 SSKVSIRYP*RRRALGKLTVTLYALHPVSRLRNNQYRASDLRTLTALICRYTSN 653 SSKVSIRYP*RR ALGKLTVTLYALHPVS LRNNQ R SD RTL+ L CRY SN Subject 1629 SSKVSIRYP*RRCALGKLTVTLYALHPVSSLRNNQGRGSDPRTLSLLFCRYASN 1790
Range 13: 1630 to 1791 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
99.6 bits(211) | 0.0 | 44/54(81%) | 0/54(0%) | Minus/Plus |
Query 491 LDVYLQINAVSVRRSDALYWLFLSLETGCNAYKVTVSFPSARLL*GYLIETFEE 652 LD YLQ N SVR S+ L WLFL LETGCNAYKVTVSFPSA LL*GYLIETFEE Subject 1630 LDAYLQNNKDSVRGSEPLPWLFLRLETGCNAYKVTVSFPSAHLL*GYLIETFEE 1791
Range 14: 1627 to 1791 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
91.8 bits(194) | 0.0 | 43/55(78%) | 0/55(0%) | Plus/Minus |
Query 491 FFKGFNKISLKKTRTGETNSDLIRITPSFETEKQPIQSIRSTDTNCVNL*IHVQY 655 FFKGFNKISLKK RTGETNSDLIRITPSFE+EKQP STDT V L*I VQ+ Subject 1627 FFKGFNKISLKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQF 1791
Grapevine leafroll associated virus 3 isolate 7 3 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130308.1 Length: 4711 Number of Matches: 14
Range 1: 1271 to 1795 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
390.5 bits(846) | 0.0 | 164/175(94%) | 0/175(0%) | Plus/Plus |
Query 5 RADFPGTQSLSVTLSIASNKLASGLMGNDAESSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKYLGGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFFKGFNKISLKKT 529 RADFP TQSLSVTLSIASNKLASGLMG+DA SSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKYLGGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFF+ LKK+ Subject 1271 RADFPNTQSLSVTLSIASNKLASGLMGSDAVSSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKYLGGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFFRDILLKPLKKS 1795
Range 2: 1269 to 1763 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
375.4 bits(813) | 0.0 | 161/165(98%) | 0/165(0%) | Minus/Minus |
Query 3 *RRCALGKLTVTLYALHPVSSLRNNQGRGSDLRTLSLLFCRYASNFWVDH*RPFAYK*N*QWSVLTHRLRSLVLRTTPRSNCSTCSSYQW*SPLLSHLSISYRR*LPVLSRVCCDTRRTRSNLPRRSSA*TTMILRRFP*DLKLTYYWLSIT*LISFEFRESLLY 497 *RRCALGKLTVTLYALHPVSSLRNNQGRGSDLRTL LLFCRYASNFWVDH*RPFAYK*N*QWSVLTHRLRSLVLRTTPRSNCSTCSSYQW*SPLLSHLSISYRR*LPVLSRVCCDTRRTRSNLPRRSSA*TTMILRRFP*DLKLTYYWLSIT*LISFE+ ESLL+ Subject 1269 *RRCALGKLTVTLYALHPVSSLRNNQGRGSDLRTLFLLFCRYASNFWVDH*RPFAYK*N*QWSVLTHRLRSLVLRTTPRSNCSTCSSYQW*SPLLSHLSISYRR*LPVLSRVCCDTRRTRSNLPRRSSA*TTMILRRFP*DLKLTYYWLSIT*LISFEYWESLLF 1763
Range 3: 1267 to 1791 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
369.0 bits(799) | 0.0 | 165/175(94%) | 0/175(0%) | Minus/Minus |
Query 1 FFRDILLKPLKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTVVCANPSTTFTCITYDASFQLFDV*FLPVVISTPLPPKYFLQKITSRPK*GLL*HTPHSK*SPASFISINDDDSASFPIRPEANLLLAIDNVTDKL*VPGKSALC 525 FF+ LKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTVVCANPSTTFTCITYDASFQLFDV*FLPVVISTPLPPKYFLQKITSRPK*GLL*HTPHSK*SPASFISINDDD+AS PIRPEANLLLAIDNVTDKL*V GKSALC Subject 1267 FFKGFNKISLKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTVVCANPSTTFTCITYDASFQLFDV*FLPVVISTPLPPKYFLQKITSRPK*GLL*HTPHSK*SPASFISINDDDTASLPIRPEANLLLAIDNVTDKL*VLGKSALC 1791
Range 4: 1268 to 1762 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
336.0 bits(727) | 0.0 | 159/165(96%) | 0/165(0%) | Minus/Minus |
Query 2 EEDAHWGN*Q*PYTHYTQFRV*ETTRVEVLIYGHYLCYFVDTRPIFG*TTNVRLRISRINSGLC*PIDYVHLYYXXXXXXXXXXXXLTSGDLHSSPT*VFPTEDNFPS*VGFVVTHAALEVISRVVHQHKRR*FCVVSHKT*S*LITGYR*RN**ALSSGKVCSM 496 +EDAHWGN*Q*PYTHYTQFRV*ETTRVEVLIYGHY CYFVDTRPIFG*TTNVRLRISRINSGLC*PIDYVHLYYVRRLVPIVRRVVLTSGDLHSSPT*VFPTEDNFPS*VGFVVTHAALEVISRVVHQHKRR*+CV SHKT*S*LITGYR*RN**ALS GKVCS+ Subject 1268 KEDAHWGN*Q*PYTHYTQFRV*ETTRVEVLIYGHYFCYFVDTRPIFG*TTNVRLRISRINSGLC*PIDYVHLYYVRRLVPIVRRVVLTSGDLHSSPT*VFPTEDNFPS*VGFVVTHAALEVISRVVHQHKRR*YCVASHKT*S*LITGYR*RN**ALSIGKVCSL 1762
Range 5: 1441 to 1761 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
261.3 bits(564) | 0.0 | 106/107(99%) | 0/107(0%) | Plus/Plus |
Query 175 TGSYLL*EILRWERSGDHHW*ELHVEQLERGVVRNTSERSRWVSTDHC*FYLYANGR*WSTQKLDAYLQNNKDSVRRSEPLPWLFLRLETGCNAYKVTVSFPSAHLL 495 TGSYLL*EILRWERSGDHHW*ELHVEQLERGVVRNTSERSRWVSTDHC*FYLYANGR*WSTQKLDAYLQNNK+SVRRSEPLPWLFLRLETGCNAYKVTVSFPSAHLL Subject 1441 TGSYLL*EILRWERSGDHHW*ELHVEQLERGVVRNTSERSRWVSTDHC*FYLYANGR*WSTQKLDAYLQNNKNSVRRSEPLPWLFLRLETGCNAYKVTVSFPSAHLL 1761
Range 6: 1267 to 1386 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
75.3 bits(158) | 0.0 | 36/40(90%) | 0/40(0%) | Plus/Plus |
Query 1 T*SRLSRNSKLISYVIDSQ**VSFRSYGKRRRIIVVYADE 120 T SRLS+ SKLISYVIDSQ**VSFRSYGKRR IIVVYADE Subject 1267 TKSRLSQYSKLISYVIDSQ**VSFRSYGKRRSIIVVYADE 1386
Range 7: 1272 to 1502 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
167.4 bits(359) | 0.0 | 74/77(96%) | 0/77(0%) | Plus/Plus |
Query 6 EQTFPELKAYQLRYR*PVIS*LQVLWETTQNHRRLC**TTREITSSAACVTTNPT*DGKLSSVGNT*VGEEWRSPLV 236 EQTFP LKAYQLRYR*PVIS*LQVLWE TQ HRRLC**TTREITSSAACVTTNPT*DGKLSSVGNT*VGEEWRSPLV Subject 1272 EQTFPILKAYQLRYR*PVIS*LQVLWEATQYHRRLC**TTREITSSAACVTTNPT*DGKLSSVGNT*VGEEWRSPLV 1502
Range 8: 1557 to 1799 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
153.7 bits(329) | 0.0 | 71/81(88%) | 0/81(0%) | Plus/Plus |
Query 291 *SMG*HRPLLILLIRKRTLVVYPKIGRVSTK*QR*CP*IRTSTLVVSQTRNWV*CV*GHC*FPQCASSSKVSIRYP*RRRA 533 *SMG*HRPLLILLIRKRTLVVYPKIGRVSTK*Q+*CP*IRTSTLVVSQTRNWV*CV*GHC*FPQCASS +S *R R+ Subject 1557 *SMG*HRPLLILLIRKRTLVVYPKIGRVSTK*QK*CP*IRTSTLVVSQTRNWV*CV*GHC*FPQCASSLGISY*NL*RNRS 1799
Range 9: 1625 to 1789 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.0 bits(225) | 0.0 | 46/55(84%) | 0/55(0%) | Plus/Minus |
Query 493 LQRFQ*DIPKEDAHWGN*Q*PYTHYTQFRD*ETTNTEHPIYGH*LR*FVDTRPIF 657 LQRFQ*DIPKEDAHWGN*Q*PYTHYTQFR *ETT E IYGH FVDTRPIF Subject 1625 LQRFQ*DIPKEDAHWGN*Q*PYTHYTQFRV*ETTRVEVLIYGHYFCYFVDTRPIF 1789
Range 10: 1625 to 1792 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
104.6 bits(222) | 0.0 | 45/56(80%) | 0/56(0%) | Minus/Plus |
Query 490 KYWTCIYKLTQLVSVDRMLCIGCFSVSKLGVMRIRSLLVSPVRVFFRDILLKPLKK 657 K WT IYK+T++VSVD+ L GCFS SKLGVMRIRSLLVSPVR+FFRDILLKPLKK Subject 1625 KNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFFRDILLKPLKK 1792
Range 11: 1629 to 1790 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
104.2 bits(221) | 0.0 | 47/54(87%) | 0/54(0%) | Minus/Plus |
Query 492 IGRVSTN*RS*CP*IGCSVLVVSQSRNWV*CV*GHC*FPQCASSLGISY*NL*R 653 IGRVST *+ *CP*I S LVVSQ+RNWV*CV*GHC*FPQCASSLGISY*NL*R Subject 1629 IGRVSTK*QK*CP*IRTSTLVVSQTRNWV*CV*GHC*FPQCASSLGISY*NL*R 1790
Range 12: 1630 to 1791 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
102.8 bits(218) | 0.0 | 45/54(83%) | 0/54(0%) | Minus/Plus |
Query 491 LDVYLQINAVSVRRSDALYWLFLSLETGCNAYKVTVSFPSARLL*GYLIETFEE 652 LD YLQ N SVRRS+ L WLFL LETGCNAYKVTVSFPSA LL*GYLIETFEE Subject 1630 LDAYLQNNKNSVRRSEPLPWLFLRLETGCNAYKVTVSFPSAHLL*GYLIETFEE 1791
Range 13: 1629 to 1790 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
102.8 bits(218) | 0.0 | 46/54(85%) | 0/54(0%) | Plus/Minus |
Query 492 SSKVSIRYP*RRRALGKLTVTLYALHPVSRLRNNQYRASDLRTLTALICRYTSN 653 SSKVSIRYP*RR ALGKLTVTLYALHPVS LRNNQ R SDLRTL L CRY SN Subject 1629 SSKVSIRYP*RRCALGKLTVTLYALHPVSSLRNNQGRGSDLRTLFLLFCRYASN 1790
Range 14: 1627 to 1791 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
91.8 bits(194) | 0.0 | 43/55(78%) | 0/55(0%) | Plus/Minus |
Query 491 FFKGFNKISLKKTRTGETNSDLIRITPSFETEKQPIQSIRSTDTNCVNL*IHVQY 655 FFKGFNKISLKK RTGETNSDLIRITPSFE+EKQP STDT V L*I VQ+ Subject 1627 FFKGFNKISLKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQF 1791
Grapevine leafroll associated virus 3 isolate 8 6 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130315.1 Length: 4711 Number of Matches: 14
Range 1: 1271 to 1795 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
390.5 bits(846) | 0.0 | 164/175(94%) | 0/175(0%) | Plus/Plus |
Query 5 RADFPGTQSLSVTLSIASNKLASGLMGNDAESSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKYLGGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFFKGFNKISLKKT 529 RADFP TQSLSVTLSIASNKLASGLMG+DA SSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKYLGGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFF+ LKK+ Subject 1271 RADFPNTQSLSVTLSIASNKLASGLMGSDAVSSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKYLGGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFFRDILLKPLKKS 1795
Range 2: 1269 to 1763 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
375.4 bits(813) | 0.0 | 161/165(98%) | 0/165(0%) | Minus/Minus |
Query 3 *RRCALGKLTVTLYALHPVSSLRNNQGRGSDLRTLSLLFCRYASNFWVDH*RPFAYK*N*QWSVLTHRLRSLVLRTTPRSNCSTCSSYQW*SPLLSHLSISYRR*LPVLSRVCCDTRRTRSNLPRRSSA*TTMILRRFP*DLKLTYYWLSIT*LISFEFRESLLY 497 *RRCALGKL VTLYALHPVSSLRNNQGRGSDLRTLSLLFCRYASNFWVDH*RPFAYK*N*QWSVLTHRLRSLVLRTTPRSNCSTCSSYQW*SPLLSHLSISYRR*LPVLSRVCCDTRRTRSNLPRRSSA*TTMILRRFP*DLKLTYYWLSIT*LISFE+ ESLL+ Subject 1269 *RRCALGKLIVTLYALHPVSSLRNNQGRGSDLRTLSLLFCRYASNFWVDH*RPFAYK*N*QWSVLTHRLRSLVLRTTPRSNCSTCSSYQW*SPLLSHLSISYRR*LPVLSRVCCDTRRTRSNLPRRSSA*TTMILRRFP*DLKLTYYWLSIT*LISFEYWESLLF 1763
Range 3: 1267 to 1791 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
369.0 bits(799) | 0.0 | 165/175(94%) | 0/175(0%) | Minus/Minus |
Query 1 FFRDILLKPLKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTVVCANPSTTFTCITYDASFQLFDV*FLPVVISTPLPPKYFLQKITSRPK*GLL*HTPHSK*SPASFISINDDDSASFPIRPEANLLLAIDNVTDKL*VPGKSALC 525 FF+ LKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTVVCANPSTTFTCITYDASFQLFDV*FLPVVISTPLPPKYFLQKITSRPK*GLL*HTPHSK*SPASFISINDDD+AS PIRPEANLLLAIDNVTDKL*V GKSALC Subject 1267 FFKGFNKISLKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTVVCANPSTTFTCITYDASFQLFDV*FLPVVISTPLPPKYFLQKITSRPK*GLL*HTPHSK*SPASFISINDDDTASLPIRPEANLLLAIDNVTDKL*VLGKSALC 1791
Range 4: 1268 to 1762 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
333.7 bits(722) | 0.0 | 159/165(96%) | 0/165(0%) | Minus/Minus |
Query 2 EEDAHWGN*Q*PYTHYTQFRV*ETTRVEVLIYGHYLCYFVDTRPIFG*TTNVRLRISRINSGLC*PIDYVHLYYXXXXXXXXXXXXLTSGDLHSSPT*VFPTEDNFPS*VGFVVTHAALEVISRVVHQHKRR*FCVVSHKT*S*LITGYR*RN**ALSSGKVCSM 496 +EDAHWGN* *PYTHYTQFRV*ETTRVEVLIYGHYLCYFVDTRPIFG*TTNVRLRISRINSGLC*PIDYVHLYYVRRLVPIVRRVVLTSGDLHSSPT*VFPTEDNFPS*VGFVVTHAALEVISRVVHQHKRR*+CV SHKT*S*LITGYR*RN**ALS GKVCS+ Subject 1268 KEDAHWGN***PYTHYTQFRV*ETTRVEVLIYGHYLCYFVDTRPIFG*TTNVRLRISRINSGLC*PIDYVHLYYVRRLVPIVRRVVLTSGDLHSSPT*VFPTEDNFPS*VGFVVTHAALEVISRVVHQHKRR*YCVASHKT*S*LITGYR*RN**ALSIGKVCSL 1762
Range 5: 1441 to 1761 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
263.2 bits(568) | 0.0 | 106/107(99%) | 0/107(0%) | Plus/Plus |
Query 175 TGSYLL*EILRWERSGDHHW*ELHVEQLERGVVRNTSERSRWVSTDHC*FYLYANGR*WSTQKLDAYLQNNKDSVRRSEPLPWLFLRLETGCNAYKVTVSFPSAHLL 495 TGSYLL*EILRWERSGDHHW*ELHVEQLERGVVRNTSERSRWVSTDHC*FYLYANGR*WSTQKLDAYLQNNKDSVRRSEPLPWLFLRLETGCNAYKVT+SFPSAHLL Subject 1441 TGSYLL*EILRWERSGDHHW*ELHVEQLERGVVRNTSERSRWVSTDHC*FYLYANGR*WSTQKLDAYLQNNKDSVRRSEPLPWLFLRLETGCNAYKVTISFPSAHLL 1761
Range 6: 1267 to 1386 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
75.3 bits(158) | 0.0 | 36/40(90%) | 0/40(0%) | Plus/Plus |
Query 1 T*SRLSRNSKLISYVIDSQ**VSFRSYGKRRRIIVVYADE 120 T SRLS+ SKLISYVIDSQ**VSFRSYGKRR IIVVYADE Subject 1267 TKSRLSQYSKLISYVIDSQ**VSFRSYGKRRSIIVVYADE 1386
Range 7: 1272 to 1502 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
167.4 bits(359) | 0.0 | 74/77(96%) | 0/77(0%) | Plus/Plus |
Query 6 EQTFPELKAYQLRYR*PVIS*LQVLWETTQNHRRLC**TTREITSSAACVTTNPT*DGKLSSVGNT*VGEEWRSPLV 236 EQTFP LKAYQLRYR*PVIS*LQVLWE TQ HRRLC**TTREITSSAACVTTNPT*DGKLSSVGNT*VGEEWRSPLV Subject 1272 EQTFPILKAYQLRYR*PVIS*LQVLWEATQYHRRLC**TTREITSSAACVTTNPT*DGKLSSVGNT*VGEEWRSPLV 1502
Range 8: 1557 to 1799 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
150.0 bits(321) | 0.0 | 71/81(88%) | 0/81(0%) | Plus/Plus |
Query 291 *SMG*HRPLLILLIRKRTLVVYPKIGRVSTK*QR*CP*IRTSTLVVSQTRNWV*CV*GHC*FPQCASSSKVSIRYP*RRRA 533 *SMG*HRPLLILLIRKRTLVVYPKIGRVSTK*QR*CP*IRTSTLVVSQTRNWV*CV*GH *FPQCASS +S *R R+ Subject 1557 *SMG*HRPLLILLIRKRTLVVYPKIGRVSTK*QR*CP*IRTSTLVVSQTRNWV*CV*GHY*FPQCASSLGISY*NL*RNRS 1799
Range 9: 1625 to 1792 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
104.6 bits(222) | 0.0 | 45/56(80%) | 0/56(0%) | Minus/Plus |
Query 490 KYWTCIYKLTQLVSVDRMLCIGCFSVSKLGVMRIRSLLVSPVRVFFRDILLKPLKK 657 K WT IYK+T++VSVD+ L GCFS SKLGVMRIRSLLVSPVR+FFRDILLKPLKK Subject 1625 KNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFFRDILLKPLKK 1792
Range 10: 1625 to 1789 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
103.7 bits(220) | 0.0 | 46/55(84%) | 0/55(0%) | Plus/Minus |
Query 493 LQRFQ*DIPKEDAHWGN*Q*PYTHYTQFRD*ETTNTEHPIYGH*LR*FVDTRPIF 657 LQRFQ*DIPKEDAHWGN* *PYTHYTQFR *ETT E IYGH L FVDTRPIF Subject 1625 LQRFQ*DIPKEDAHWGN***PYTHYTQFRV*ETTRVEVLIYGHYLCYFVDTRPIF 1789
Range 11: 1630 to 1791 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
102.3 bits(217) | 0.0 | 44/54(81%) | 0/54(0%) | Minus/Plus |
Query 491 LDVYLQINAVSVRRSDALYWLFLSLETGCNAYKVTVSFPSARLL*GYLIETFEE 652 LD YLQ N SVRRS+ L WLFL LETGCNAYKVT+SFPSA LL*GYLIETFEE Subject 1630 LDAYLQNNKDSVRRSEPLPWLFLRLETGCNAYKVTISFPSAHLL*GYLIETFEE 1791
Range 12: 1629 to 1790 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.4 bits(215) | 0.0 | 45/54(83%) | 0/54(0%) | Plus/Minus |
Query 492 SSKVSIRYP*RRRALGKLTVTLYALHPVSRLRNNQYRASDLRTLTALICRYTSN 653 SSKVSIRYP*RR ALGKL VTLYALHPVS LRNNQ R SDLRTL+ L CRY SN Subject 1629 SSKVSIRYP*RRCALGKLIVTLYALHPVSSLRNNQGRGSDLRTLSLLFCRYASN 1790
Range 13: 1629 to 1790 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
98.7 bits(209) | 0.0 | 46/54(85%) | 0/54(0%) | Minus/Plus |
Query 492 IGRVSTN*RS*CP*IGCSVLVVSQSRNWV*CV*GHC*FPQCASSLGISY*NL*R 653 IGRVST *+ *CP*I S LVVSQ+RNWV*CV*GH *FPQCASSLGISY*NL*R Subject 1629 IGRVSTK*QR*CP*IRTSTLVVSQTRNWV*CV*GHY*FPQCASSLGISY*NL*R 1790
Range 14: 1627 to 1791 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
91.8 bits(194) | 0.0 | 43/55(78%) | 0/55(0%) | Plus/Minus |
Query 491 FFKGFNKISLKKTRTGETNSDLIRITPSFETEKQPIQSIRSTDTNCVNL*IHVQY 655 FFKGFNKISLKK RTGETNSDLIRITPSFE+EKQP STDT V L*I VQ+ Subject 1627 FFKGFNKISLKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQF 1791
Grapevine leafroll associated virus 3 isolate 8 8 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130316.1 Length: 4711 Number of Matches: 14
Range 1: 1271 to 1795 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
390.5 bits(846) | 0.0 | 164/175(94%) | 0/175(0%) | Plus/Plus |
Query 5 RADFPGTQSLSVTLSIASNKLASGLMGNDAESSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKYLGGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFFKGFNKISLKKT 529 RADFP TQSLSVTLSIASNKLASGLMG+DA SSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKYLGGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFF+ LKK+ Subject 1271 RADFPNTQSLSVTLSIASNKLASGLMGSDAVSSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKYLGGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFFRDILLKPLKKS 1795
Range 2: 1269 to 1763 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
375.4 bits(813) | 0.0 | 161/165(98%) | 0/165(0%) | Minus/Minus |
Query 3 *RRCALGKLTVTLYALHPVSSLRNNQGRGSDLRTLSLLFCRYASNFWVDH*RPFAYK*N*QWSVLTHRLRSLVLRTTPRSNCSTCSSYQW*SPLLSHLSISYRR*LPVLSRVCCDTRRTRSNLPRRSSA*TTMILRRFP*DLKLTYYWLSIT*LISFEFRESLLY 497 *RRCALGKL VTLYALHPVSSLRNNQGRGSDLRTLSLLFCRYASNFWVDH*RPFAYK*N*QWSVLTHRLRSLVLRTTPRSNCSTCSSYQW*SPLLSHLSISYRR*LPVLSRVCCDTRRTRSNLPRRSSA*TTMILRRFP*DLKLTYYWLSIT*LISFE+ ESLL+ Subject 1269 *RRCALGKLIVTLYALHPVSSLRNNQGRGSDLRTLSLLFCRYASNFWVDH*RPFAYK*N*QWSVLTHRLRSLVLRTTPRSNCSTCSSYQW*SPLLSHLSISYRR*LPVLSRVCCDTRRTRSNLPRRSSA*TTMILRRFP*DLKLTYYWLSIT*LISFEYWESLLF 1763
Range 3: 1267 to 1791 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
369.0 bits(799) | 0.0 | 165/175(94%) | 0/175(0%) | Minus/Minus |
Query 1 FFRDILLKPLKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTVVCANPSTTFTCITYDASFQLFDV*FLPVVISTPLPPKYFLQKITSRPK*GLL*HTPHSK*SPASFISINDDDSASFPIRPEANLLLAIDNVTDKL*VPGKSALC 525 FF+ LKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTVVCANPSTTFTCITYDASFQLFDV*FLPVVISTPLPPKYFLQKITSRPK*GLL*HTPHSK*SPASFISINDDD+AS PIRPEANLLLAIDNVTDKL*V GKSALC Subject 1267 FFKGFNKISLKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTVVCANPSTTFTCITYDASFQLFDV*FLPVVISTPLPPKYFLQKITSRPK*GLL*HTPHSK*SPASFISINDDDTASLPIRPEANLLLAIDNVTDKL*VLGKSALC 1791
Range 4: 1268 to 1762 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
333.7 bits(722) | 0.0 | 159/165(96%) | 0/165(0%) | Minus/Minus |
Query 2 EEDAHWGN*Q*PYTHYTQFRV*ETTRVEVLIYGHYLCYFVDTRPIFG*TTNVRLRISRINSGLC*PIDYVHLYYXXXXXXXXXXXXLTSGDLHSSPT*VFPTEDNFPS*VGFVVTHAALEVISRVVHQHKRR*FCVVSHKT*S*LITGYR*RN**ALSSGKVCSM 496 +EDAHWGN* *PYTHYTQFRV*ETTRVEVLIYGHYLCYFVDTRPIFG*TTNVRLRISRINSGLC*PIDYVHLYYVRRLVPIVRRVVLTSGDLHSSPT*VFPTEDNFPS*VGFVVTHAALEVISRVVHQHKRR*+CV SHKT*S*LITGYR*RN**ALS GKVCS+ Subject 1268 KEDAHWGN***PYTHYTQFRV*ETTRVEVLIYGHYLCYFVDTRPIFG*TTNVRLRISRINSGLC*PIDYVHLYYVRRLVPIVRRVVLTSGDLHSSPT*VFPTEDNFPS*VGFVVTHAALEVISRVVHQHKRR*YCVASHKT*S*LITGYR*RN**ALSIGKVCSL 1762
Range 5: 1441 to 1761 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
263.2 bits(568) | 0.0 | 106/107(99%) | 0/107(0%) | Plus/Plus |
Query 175 TGSYLL*EILRWERSGDHHW*ELHVEQLERGVVRNTSERSRWVSTDHC*FYLYANGR*WSTQKLDAYLQNNKDSVRRSEPLPWLFLRLETGCNAYKVTVSFPSAHLL 495 TGSYLL*EILRWERSGDHHW*ELHVEQLERGVVRNTSERSRWVSTDHC*FYLYANGR*WSTQKLDAYLQNNKDSVRRSEPLPWLFLRLETGCNAYKVT+SFPSAHLL Subject 1441 TGSYLL*EILRWERSGDHHW*ELHVEQLERGVVRNTSERSRWVSTDHC*FYLYANGR*WSTQKLDAYLQNNKDSVRRSEPLPWLFLRLETGCNAYKVTISFPSAHLL 1761
Range 6: 1267 to 1386 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
75.3 bits(158) | 0.0 | 36/40(90%) | 0/40(0%) | Plus/Plus |
Query 1 T*SRLSRNSKLISYVIDSQ**VSFRSYGKRRRIIVVYADE 120 T SRLS+ SKLISYVIDSQ**VSFRSYGKRR IIVVYADE Subject 1267 TKSRLSQYSKLISYVIDSQ**VSFRSYGKRRSIIVVYADE 1386
Range 7: 1272 to 1502 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
167.4 bits(359) | 0.0 | 74/77(96%) | 0/77(0%) | Plus/Plus |
Query 6 EQTFPELKAYQLRYR*PVIS*LQVLWETTQNHRRLC**TTREITSSAACVTTNPT*DGKLSSVGNT*VGEEWRSPLV 236 EQTFP LKAYQLRYR*PVIS*LQVLWE TQ HRRLC**TTREITSSAACVTTNPT*DGKLSSVGNT*VGEEWRSPLV Subject 1272 EQTFPILKAYQLRYR*PVIS*LQVLWEATQYHRRLC**TTREITSSAACVTTNPT*DGKLSSVGNT*VGEEWRSPLV 1502
Range 8: 1557 to 1799 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
150.0 bits(321) | 0.0 | 71/81(88%) | 0/81(0%) | Plus/Plus |
Query 291 *SMG*HRPLLILLIRKRTLVVYPKIGRVSTK*QR*CP*IRTSTLVVSQTRNWV*CV*GHC*FPQCASSSKVSIRYP*RRRA 533 *SMG*HRPLLILLIRKRTLVVYPKIGRVSTK*QR*CP*IRTSTLVVSQTRNWV*CV*GH *FPQCASS +S *R R+ Subject 1557 *SMG*HRPLLILLIRKRTLVVYPKIGRVSTK*QR*CP*IRTSTLVVSQTRNWV*CV*GHY*FPQCASSLGISY*NL*RNRS 1799
Range 9: 1625 to 1792 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
104.6 bits(222) | 0.0 | 45/56(80%) | 0/56(0%) | Minus/Plus |
Query 490 KYWTCIYKLTQLVSVDRMLCIGCFSVSKLGVMRIRSLLVSPVRVFFRDILLKPLKK 657 K WT IYK+T++VSVD+ L GCFS SKLGVMRIRSLLVSPVR+FFRDILLKPLKK Subject 1625 KNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLLVSPVRIFFRDILLKPLKK 1792
Range 10: 1625 to 1789 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
103.7 bits(220) | 0.0 | 46/55(84%) | 0/55(0%) | Plus/Minus |
Query 493 LQRFQ*DIPKEDAHWGN*Q*PYTHYTQFRD*ETTNTEHPIYGH*LR*FVDTRPIF 657 LQRFQ*DIPKEDAHWGN* *PYTHYTQFR *ETT E IYGH L FVDTRPIF Subject 1625 LQRFQ*DIPKEDAHWGN***PYTHYTQFRV*ETTRVEVLIYGHYLCYFVDTRPIF 1789
Range 11: 1630 to 1791 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
102.3 bits(217) | 0.0 | 44/54(81%) | 0/54(0%) | Minus/Plus |
Query 491 LDVYLQINAVSVRRSDALYWLFLSLETGCNAYKVTVSFPSARLL*GYLIETFEE 652 LD YLQ N SVRRS+ L WLFL LETGCNAYKVT+SFPSA LL*GYLIETFEE Subject 1630 LDAYLQNNKDSVRRSEPLPWLFLRLETGCNAYKVTISFPSAHLL*GYLIETFEE 1791
Range 12: 1629 to 1790 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.4 bits(215) | 0.0 | 45/54(83%) | 0/54(0%) | Plus/Minus |
Query 492 SSKVSIRYP*RRRALGKLTVTLYALHPVSRLRNNQYRASDLRTLTALICRYTSN 653 SSKVSIRYP*RR ALGKL VTLYALHPVS LRNNQ R SDLRTL+ L CRY SN Subject 1629 SSKVSIRYP*RRCALGKLIVTLYALHPVSSLRNNQGRGSDLRTLSLLFCRYASN 1790
Range 13: 1629 to 1790 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
98.7 bits(209) | 0.0 | 46/54(85%) | 0/54(0%) | Minus/Plus |
Query 492 IGRVSTN*RS*CP*IGCSVLVVSQSRNWV*CV*GHC*FPQCASSLGISY*NL*R 653 IGRVST *+ *CP*I S LVVSQ+RNWV*CV*GH *FPQCASSLGISY*NL*R Subject 1629 IGRVSTK*QR*CP*IRTSTLVVSQTRNWV*CV*GHY*FPQCASSLGISY*NL*R 1790
Range 14: 1627 to 1791 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
91.8 bits(194) | 0.0 | 43/55(78%) | 0/55(0%) | Plus/Minus |
Query 491 FFKGFNKISLKKTRTGETNSDLIRITPSFETEKQPIQSIRSTDTNCVNL*IHVQY 655 FFKGFNKISLKK RTGETNSDLIRITPSFE+EKQP STDT V L*I VQ+ Subject 1627 FFKGFNKISLKKMRTGETNSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQF 1791
Nucleotide Sequence (897 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
666.4 | 3628.5 | 31% | 0 | 89% | JX559645.1 | |
666.4 | 3612.0 | 31% | 0 | 88% | NC_004667.1 | |
666.4 | 3612.0 | 31% | 0 | 88% | AF037268.2 | |
666.4 | 3641.4 | 31% | 0 | 89% | GQ352631.1 | |
666.4 | 3636.3 | 31% | 0 | 89% | GU983863.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 12
Range 1: 7696 to 8586 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
666.4 bits(1448) | 0.0 | 295/297(99%) | 0/297(0%) | Minus/Plus |
Query 2 SSVGLPKRNTLKCNLVTFENRNFNADRGCNVGCDDSVAHELKEIFFEEVVNKARLAEVTESHLSSNTMLLSDWLDKRAPNAYKSLKRALGSFVFHPSMLTSYTLMVKADVKPKLDNTPLSKYVTGQNIVYHDRRVTALFSCIFTACVERLKYVVDERWLFYHGMDTAELAVALRNNLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNXXXXXXXXXXXLRGLDYSYIVVSGDDSLIFSRQPLDIDTS 892 SSVGLPKRNTLKCNLVTFENRNFNADRGCNVGCDDSVAHELKEIFFEEVVNKARLAEVTESHLSSNTMLLSDWLDKRAPNAYKSLKRALGSFVFHPSMLTSYTLMVKADVKPKLDNTPLSKYVTGQNIVYHDR VTALFSCIFTACVERLKYVVDERWLFYHGMDTAELA ALRNNLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNSLVLCTLLSVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTS Subject 7696 SSVGLPKRNTLKCNLVTFENRNFNADRGCNVGCDDSVAHELKEIFFEEVVNKARLAEVTESHLSSNTMLLSDWLDKRAPNAYKSLKRALGSFVFHPSMLTSYTLMVKADVKPKLDNTPLSKYVTGQNIVYHDRCVTALFSCIFTACVERLKYVVDERWLFYHGMDTAELAAALRNNLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNSLVLCTLLSVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTS 8586
Range 2: 7694 to 8587 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
642.1 bits(1395) | 0.0 | 278/298(93%) | 0/298(0%) | Plus/Minus |
Query 1 PTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSSFSRRYHTHHKRK*TKLLYQHQXXXXXXXXXXXXEHSEICRTY*YPVHRCSIAGCPPNCSSMQPPTPQCPSRGRRATFHPLHISNALRTQ*RCRRKAQLRVYRGRLYSAPLRTSTMAYCPTWVLRLLSP*AYKTST*TDERQTNLKPA*ETCKR*VPFCPTNLITTSCCWTNGFPSPLLNELC*RPPRRKSPSVHAPQSHHNPRYNRDRR*NSCSQTLPGCTLMCCASVNLH*T 894 PTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSSFSRRYHTHHKRK*TKLLYQHQVSRVSTPPPVS*EHSEICRTY*YPVHRCSIAGCPPNCSSMQ PTPQCPSRGRRATF L I +ALRTQ*+C++KAQLR YRGRLYSAPLRTSTMAYCPTWVLRLLSP*AYKTST*TDERQTNLKPA*ETCKR*VPFCPTNLITTSCCWTNGFPSPLLNELC*RPPRRKSPSVHAPQS HNPRYNRDRR*NS QT G T CCA VNL *T Subject 7694 PTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSSFSRRYHTHHKRK*TKLLYQHQVSRVSTPPPVS*EHSEICRTY*YPVHRCSIAGCPPNCSSMQLPTPQCPSRGRRATFRLLRILSALRTQ*KCKKKAQLRTYRGRLYSAPLRTSTMAYCPTWVLRLLSP*AYKTST*TDERQTNLKPA*ETCKR*VPFCPTNLITTSCCWTNGFPSPLLNELC*RPPRRKSPSVHAPQSRHNPRYNRDRR*NSYFQT*RGYTSRCCALVNLR*T 8587
Range 3: 7693 to 8586 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
614.6 bits(1335) | 0.0 | 276/298(93%) | 0/298(0%) | Plus/Minus |
Query 2 RRINI*RLPTKYEAXXXXXXXXXXXXSPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHRSHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQIVPQCNRQLRSVHPVVEEPPFIHYIFQTLYARSKDAGEKRSYASIVVDYILPRYVLRQWRIVQLGFYVCFHHKRIRRQHRRMKDKRT*SPLERLVSVRCPFVQPI**QHRVAGQMAFRHLC*TSFVNDLLEENLLQFMRHRVITTHVTTAIGVEIPVLKRYQVAL*CVALR*TYTRP 895 RRINI*RLPTKYEAIITTNYNITII*SPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHRSHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQIVPQC+ QLRSVHPVVEEPPF++Y+F LYARSK+A +KRSYA IVVDYILPRYVLRQWRIVQLGFYVCFHH+RIRRQHRRMKDKRT*SPLERLVSVRCPFVQPI**QHRVAGQMAFRHLC*TSFVNDLLEENLLQFMRHRV+TTHVTTAIGVEIP+ KR +V L VAL *TY RP Subject 7693 RRINI*RLPTKYEAIITTNYNITII*SPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHRSHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQIVPQCSCQLRSVHPVVEEPPFVYYVF*ALYARSKNARKKRSYAPIVVDYILPRYVLRQWRIVQLGFYVCFHHERIRRQHRRMKDKRT*SPLERLVSVRCPFVQPI**QHRVAGQMAFRHLC*TSFVNDLLEENLLQFMRHRVVTTHVTTAIGVEIPIFKRDEVTLQGVALW*TYARP 8586
Range 4: 7695 to 8585 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
593.5 bits(1289) | 0.0 | 277/297(93%) | 0/297(0%) | Minus/Plus |
Query 3 V*CRFTEAQHIKVQPGNV*EQEFQRRSRL*RGL**LCGA*TEGDFLXXXXXXXXXXXGDGKPFVQQHDVVIRLVGQKGT*RLQVSQAGFRFVCLSSVYVDVLYAYGESRRKTQVGQYAIVEVRNGAEYSLPR*TRNCAFLLHLYCVRRAFEICSG*KVALLPRDGHCGVGGCIEEQFGGHPAILHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RRENDDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YV 893 V* RFT+AQH++V P +V*+ EFQRRSRL*RGL* LCGA*TEGDFLRGGR*QSSFSRGDGKPFVQQHDVVIRLVGQKGT*RLQVSQAGFRFVCLSSVYVDVLYA+GESRRKTQVGQYAIVEVRNGAEYSLPR* RNCAF LH YCVRRA +I S KVALLPRDGHCGVG CIEEQFGGHPAILHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RRENDDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YV Subject 7695 V*RRFTKAQHLEV*PRHV*K*EFQRRSRL*RGL*RLCGA*TEGDFLRGGR*QSSFSRGDGKPFVQQHDVVIRLVGQKGT*RLQVSQAGFRFVCLSSVYVDVLYAHGESRRKTQVGQYAIVEVRNGAEYSLPR*VRNCAFFLHFYCVRRALKIRSRRKVALLPRDGHCGVGSCIEEQFGGHPAILHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RRENDDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YV 8585
Range 5: 7959 to 8249 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
220.1 bits(474) | 0.0 | 94/97(97%) | 0/97(0%) | Plus/Minus |
Query 339 V*YCRMSPKLFLNATANSAVSIPW*KSHLSSTTYFKRSTHAVKMQEKSAVTRLSW*TIFCPVTYFDNGVLSNLGFTSAFTISV*DVNIDG*KTNEPK 629 V*YCRMSPKLFLNA ANSAVSIPW*KSHLSSTTYFKRSTHAVKMQEKSAVT LSW*TIFCPVTYFDNGVLSNLGFTSAFT+SV*DVNIDG*KTNEPK Subject 7959 V*YCRMSPKLFLNAAANSAVSIPW*KSHLSSTTYFKRSTHAVKMQEKSAVTHLSW*TIFCPVTYFDNGVLSNLGFTSAFTMSV*DVNIDG*KTNEPK 8249
Range 6: 8289 to 8510 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
175.2 bits(376) | 0.0 | 74/74(100%) | 0/74(0%) | Plus/Minus |
Query 78 NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA 299 NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA Subject 8289 NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA 8510
Range 7: 7695 to 7919 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
171.5 bits(368) | 0.0 | 74/75(99%) | 0/75(0%) | Plus/Minus |
Query 669 SNQSDNNIVLLDKWLSVTSAKRALLTTSSKKISFSSCATESSQPTLQPRSALKFLFSNVTRLHFNVLRFGKPTLD 893 SNQSDNNIVLLDKWLSVTSAKRALLTTSSKKISFSSCATESSQPTLQPRSALKFLFSNVTRLHF VLRFGKPTLD Subject 7695 SNQSDNNIVLLDKWLSVTSAKRALLTTSSKKISFSSCATESSQPTLQPRSALKFLFSNVTRLHFKVLRFGKPTLD 7919
Range 8: 8547 to 8585 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
34.1 bits(68) | 0.0 | 13/13(100%) | 0/13(0%) | Plus/Minus |
Query 3 DVSISNGCRLNMR 41 DVSISNGCRLNMR Subject 8547 DVSISNGCRLNMR 8585
Range 9: 8096 to 8509 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
296.2 bits(640) | 0.0 | 130/138(94%) | 0/138(0%) | Minus/Plus |
Query 79 A*LRFSPASLLRA*SV*NM*WMKGGSSTTGWTLRSWRLH*GTIWGTSGNTTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*ER*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD 492 A*LRF A LLRA*S *N * KGGSSTTGWTLRSW+LH*GTIWGTSGNTTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*ER*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD Subject 8096 A*LRFFLAFLLRA*SA*NT**TKGGSSTTGWTLRSWQLH*GTIWGTSGNTTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*ER*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD 8509
Range 10: 7694 to 7930 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
137.2 bits(293) | 0.0 | 70/79(89%) | 0/79(0%) | Minus/Plus |
Query 658 GLV*VYRSATH*SATW*RLRTGISTPIAVVTWVVMTLWRMNXXXXXXXXSLTKLV*QR*RKAICPATRCCYQIGWTKGH 894 GL *VY+SAT *S T RL+ GISTPIAVVTWVV TLWRMN*RRFSSRRSLTKLV*QR*RKAICPATRCCYQIGWTKGH Subject 7694 GLA*VYQSATP*SVTSSRLKIGISTPIAVVTWVVTTLWRMN*RRFSSRRSLTKLV*QR*RKAICPATRCCYQIGWTKGH 7930
Grapevine leafroll associated virus 3, complete genome
Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 12
Range 1: 7117 to 8007 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
666.4 bits(1448) | 0.0 | 295/297(99%) | 0/297(0%) | Minus/Plus |
Query 2 SSVGLPKRNTLKCNLVTFENRNFNADRGCNVGCDDSVAHELKEIFFEEVVNKARLAEVTESHLSSNTMLLSDWLDKRAPNAYKSLKRALGSFVFHPSMLTSYTLMVKADVKPKLDNTPLSKYVTGQNIVYHDRRVTALFSCIFTACVERLKYVVDERWLFYHGMDTAELAVALRNNLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNXXXXXXXXXXXLRGLDYSYIVVSGDDSLIFSRQPLDIDTS 892 SSVGLPKRNTLKCNLVTFENRNFNADRGCNVGCDDSVAHELKEIFFEEVVNKARLAEVTESHLSSNTMLLSDWLDKRAPNAYKSLKRALGSFVFHPSMLTSYTLMVKADVKPKLDNTPLSKYVTGQNIVYHDR VTALFSCIFTACVERLKYVVDERWLFYHGMDTAELA ALRNNLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNSLVLCTLLSVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTS Subject 7117 SSVGLPKRNTLKCNLVTFENRNFNADRGCNVGCDDSVAHELKEIFFEEVVNKARLAEVTESHLSSNTMLLSDWLDKRAPNAYKSLKRALGSFVFHPSMLTSYTLMVKADVKPKLDNTPLSKYVTGQNIVYHDRCVTALFSCIFTACVERLKYVVDERWLFYHGMDTAELAAALRNNLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNSLVLCTLLSVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTS 8007
Range 2: 7115 to 8008 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
641.6 bits(1394) | 0.0 | 276/298(93%) | 0/298(0%) | Plus/Minus |
Query 1 PTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSSFSRRYHTHHKRK*TKLLYQHQXXXXXXXXXXXXEHSEICRTY*YPVHRCSIAGCPPNCSSMQPPTPQCPSRGRRATFHPLHISNALRTQ*RCRRKAQLRVYRGRLYSAPLRTSTMAYCPTWVLRLLSP*AYKTST*TDERQTNLKPA*ETCKR*VPFCPTNLITTSCCWTNGFPSPLLNELC*RPPRRKSPSVHAPQSHHNPRYNRDRR*NSCSQTLPGCTLMCCASVNLH*T 894 PTYQY TAAD*I*GYHH *LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSSFSRRYHTHHKRK*TKLLYQHQVSRVSTPPP S*EHSEICRTY*YPVHRCSIAGCPPNCSSMQPPTPQCPSRGRRATF PL I +ALRTQ*+C++KAQLR YRGRLYSAPLRTSTMAYCPTWVLRLLSP*AYK ST*TDERQTNLKPA*ETCKR*VPFCPTNLITTSCCWTNGFPSPLLNELC*RPPRRKSPSVHAPQS HNPRYNRDRR*NS QT G T CCA VNL *T Subject 7115 PTYQYPTAAD*I*GYHHR*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSSFSRRYHTHHKRK*TKLLYQHQVSRVSTPPPAS*EHSEICRTY*YPVHRCSIAGCPPNCSSMQPPTPQCPSRGRRATFRPLRILSALRTQ*KCKKKAQLRTYRGRLYSAPLRTSTMAYCPTWVLRLLSP*AYKKST*TDERQTNLKPA*ETCKR*VPFCPTNLITTSCCWTNGFPSPLLNELC*RPPRRKSPSVHAPQSRHNPRYNRDRR*NSYFQT*RGYTSRCCALVNLR*T 8008
Range 3: 7114 to 8007 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
611.4 bits(1328) | 0.0 | 273/298(92%) | 0/298(0%) | Plus/Minus |
Query 2 RRINI*RLPTKYEAXXXXXXXXXXXXSPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHRSHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQIVPQCNRQLRSVHPVVEEPPFIHYIFQTLYARSKDAGEKRSYASIVVDYILPRYVLRQWRIVQLGFYVCFHHKRIRRQHRRMKDKRT*SPLERLVSVRCPFVQPI**QHRVAGQMAFRHLC*TSFVNDLLEENLLQFMRHRVITTHVTTAIGVEIPVLKRYQVAL*CVALR*TYTRP 895 RRINI RLPTKY+AIIT NYNITII*SPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHRSHDAIILTTKESRQNFSINTKCQEYQLLHL HESTLRFVVLTDIQFIGVVLPDVPQIVPQC+RQLRSVHPVVEEPPF+HY+F LYARSK+A +KRSYA IVVDYILPRYVLRQWRIVQLGFYVCFHH+RIR QHRRMKDKRT*SPLERLVSVRCPFVQPI**QHRVAGQMAFRHLC*TSFVNDLLEENLLQFMRHRV+TTHVTTAIGVEIP+ KR +V L VAL *TY RP Subject 7114 RRINIQRLPTKYKAIITANYNITII*SPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHRSHDAIILTTKESRQNFSINTKCQEYQLLHLLHESTLRFVVLTDIQFIGVVLPDVPQIVPQCSRQLRSVHPVVEEPPFVHYVF*ALYARSKNARKKRSYAPIVVDYILPRYVLRQWRIVQLGFYVCFHHERIRSQHRRMKDKRT*SPLERLVSVRCPFVQPI**QHRVAGQMAFRHLC*TSFVNDLLEENLLQFMRHRVVTTHVTTAIGVEIPIFKRDEVTLQGVALW*TYARP 8007
Range 4: 7116 to 8006 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
583.0 bits(1266) | 0.0 | 274/297(92%) | 0/297(0%) | Minus/Plus |
Query 3 V*CRFTEAQHIKVQPGNV*EQEFQRRSRL*RGL**LCGA*TEGDFLXXXXXXXXXXXGDGKPFVQQHDVVIRLVGQKGT*RLQVSQAGFRFVCLSSVYVDVLYAYGESRRKTQVGQYAIVEVRNGAEYSLPR*TRNCAFLLHLYCVRRAFEICSG*KVALLPRDGHCGVGGCIEEQFGGHPAILHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RRENDDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YV 893 V* RFT+AQH++V P +V*+ EFQRRSRL*RGL* LCGA*TEGDFLRGGR*QSSFSRGDGKPFVQQHDVVIRLVGQKGT*RLQVSQAGFRFVCLSSVYVD LYA+GESRRKTQVGQYAIVEVRNGAEYSLPR* RNCAF LH YCVRRA +I SG KVALLPRDGHCGVGGCIEEQFGGHPAILHL*TGYQ*VRQISECSHE GGGVDTLDTWC**RSFVYFLLW*V**RRENDDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS* ***P+I*SAAV Y*YV Subject 7116 V*RRFTKAQHLEV*PRHV*K*EFQRRSRL*RGL*RLCGA*TEGDFLRGGR*QSSFSRGDGKPFVQQHDVVIRLVGQKGT*RLQVSQAGFRFVCLSSVYVDFLYAHGESRRKTQVGQYAIVEVRNGAEYSLPR*VRNCAFFLHFYCVRRALKIRSGRKVALLPRDGHCGVGGCIEEQFGGHPAILHL*TGYQ*VRQISECSHEAGGGVDTLDTWC**RSFVYFLLW*V**RRENDDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*R***PYI*SAAVGY*YV 8006
Range 5: 7380 to 7670 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
218.3 bits(470) | 0.0 | 93/97(96%) | 0/97(0%) | Plus/Minus |
Query 339 V*YCRMSPKLFLNATANSAVSIPW*KSHLSSTTYFKRSTHAVKMQEKSAVTRLSW*TIFCPVTYFDNGVLSNLGFTSAFTISV*DVNIDG*KTNEPK 629 V*YCRMSPKLFLNA ANSAVSIPW*KSHLSSTTYFKRSTHAVKMQEKSAVT LSW*TIFCPVTYFDNGVLSNLGFTSAFT+SV*+VNIDG*KTNEPK Subject 7380 V*YCRMSPKLFLNAAANSAVSIPW*KSHLSSTTYFKRSTHAVKMQEKSAVTHLSW*TIFCPVTYFDNGVLSNLGFTSAFTMSV*EVNIDG*KTNEPK 7670
Range 6: 7710 to 7931 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
175.2 bits(376) | 0.0 | 74/74(100%) | 0/74(0%) | Plus/Minus |
Query 78 NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA 299 NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA Subject 7710 NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA 7931
Range 7: 7116 to 7340 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
171.5 bits(368) | 0.0 | 74/75(99%) | 0/75(0%) | Plus/Minus |
Query 669 SNQSDNNIVLLDKWLSVTSAKRALLTTSSKKISFSSCATESSQPTLQPRSALKFLFSNVTRLHFNVLRFGKPTLD 893 SNQSDNNIVLLDKWLSVTSAKRALLTTSSKKISFSSCATESSQPTLQPRSALKFLFSNVTRLHF VLRFGKPTLD Subject 7116 SNQSDNNIVLLDKWLSVTSAKRALLTTSSKKISFSSCATESSQPTLQPRSALKFLFSNVTRLHFKVLRFGKPTLD 7340
Range 8: 7968 to 8006 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
32.2 bits(64) | 0.0 | 12/13(92%) | 0/13(0%) | Plus/Minus |
Query 3 DVSISNGCRLNMR 41 DVSISNGCRLN+R Subject 7968 DVSISNGCRLNIR 8006
Range 9: 7517 to 7930 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
302.6 bits(654) | 0.0 | 131/138(95%) | 0/138(0%) | Minus/Plus |
Query 79 A*LRFSPASLLRA*SV*NM*WMKGGSSTTGWTLRSWRLH*GTIWGTSGNTTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*ER*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD 492 A*LRF A LLRA*S *N *W KGGSSTTGWTLRSWRLH*GTIWGTSGNTTPMNWISVSTTNLRVLS*+RWRS*YS*HLVLIEKFCLLSFVVSMIAS*ER*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD Subject 7517 A*LRFFLAFLLRA*SA*NT*WTKGGSSTTGWTLRSWRLH*GTIWGTSGNTTPMNWISVSTTNLRVLS*SRWRS*YS*HLVLIEKFCLLSFVVSMIAS*ER*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD 7930
Range 10: 7115 to 7351 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
137.2 bits(293) | 0.0 | 70/79(89%) | 0/79(0%) | Minus/Plus |
Query 658 GLV*VYRSATH*SATW*RLRTGISTPIAVVTWVVMTLWRMNXXXXXXXXSLTKLV*QR*RKAICPATRCCYQIGWTKGH 894 GL *VY+SAT *S T RL+ GISTPIAVVTWVV TLWRMN*RRFSSRRSLTKLV*QR*RKAICPATRCCYQIGWTKGH Subject 7115 GLA*VYQSATP*SVTSSRLKIGISTPIAVVTWVVTTLWRMN*RRFSSRRSLTKLV*QR*RKAICPATRCCYQIGWTKGH 7351
Grapevine leafroll associated virus 3, complete genome
Sequence ID: AF037268.2 Length: 17919 Number of Matches: 12
Range 1: 7117 to 8007 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
666.4 bits(1448) | 0.0 | 295/297(99%) | 0/297(0%) | Minus/Plus |
Query 2 SSVGLPKRNTLKCNLVTFENRNFNADRGCNVGCDDSVAHELKEIFFEEVVNKARLAEVTESHLSSNTMLLSDWLDKRAPNAYKSLKRALGSFVFHPSMLTSYTLMVKADVKPKLDNTPLSKYVTGQNIVYHDRRVTALFSCIFTACVERLKYVVDERWLFYHGMDTAELAVALRNNLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNXXXXXXXXXXXLRGLDYSYIVVSGDDSLIFSRQPLDIDTS 892 SSVGLPKRNTLKCNLVTFENRNFNADRGCNVGCDDSVAHELKEIFFEEVVNKARLAEVTESHLSSNTMLLSDWLDKRAPNAYKSLKRALGSFVFHPSMLTSYTLMVKADVKPKLDNTPLSKYVTGQNIVYHDR VTALFSCIFTACVERLKYVVDERWLFYHGMDTAELA ALRNNLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNSLVLCTLLSVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTS Subject 7117 SSVGLPKRNTLKCNLVTFENRNFNADRGCNVGCDDSVAHELKEIFFEEVVNKARLAEVTESHLSSNTMLLSDWLDKRAPNAYKSLKRALGSFVFHPSMLTSYTLMVKADVKPKLDNTPLSKYVTGQNIVYHDRCVTALFSCIFTACVERLKYVVDERWLFYHGMDTAELAAALRNNLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNSLVLCTLLSVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTS 8007
Range 2: 7115 to 8008 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
641.6 bits(1394) | 0.0 | 276/298(93%) | 0/298(0%) | Plus/Minus |
Query 1 PTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSSFSRRYHTHHKRK*TKLLYQHQXXXXXXXXXXXXEHSEICRTY*YPVHRCSIAGCPPNCSSMQPPTPQCPSRGRRATFHPLHISNALRTQ*RCRRKAQLRVYRGRLYSAPLRTSTMAYCPTWVLRLLSP*AYKTST*TDERQTNLKPA*ETCKR*VPFCPTNLITTSCCWTNGFPSPLLNELC*RPPRRKSPSVHAPQSHHNPRYNRDRR*NSCSQTLPGCTLMCCASVNLH*T 894 PTYQY TAAD*I*GYHH *LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSSFSRRYHTHHKRK*TKLLYQHQVSRVSTPPP S*EHSEICRTY*YPVHRCSIAGCPPNCSSMQPPTPQCPSRGRRATF PL I +ALRTQ*+C++KAQLR YRGRLYSAPLRTSTMAYCPTWVLRLLSP*AYK ST*TDERQTNLKPA*ETCKR*VPFCPTNLITTSCCWTNGFPSPLLNELC*RPPRRKSPSVHAPQS HNPRYNRDRR*NS QT G T CCA VNL *T Subject 7115 PTYQYPTAAD*I*GYHHR*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSSFSRRYHTHHKRK*TKLLYQHQVSRVSTPPPAS*EHSEICRTY*YPVHRCSIAGCPPNCSSMQPPTPQCPSRGRRATFRPLRILSALRTQ*KCKKKAQLRTYRGRLYSAPLRTSTMAYCPTWVLRLLSP*AYKKST*TDERQTNLKPA*ETCKR*VPFCPTNLITTSCCWTNGFPSPLLNELC*RPPRRKSPSVHAPQSRHNPRYNRDRR*NSYFQT*RGYTSRCCALVNLR*T 8008
Range 3: 7114 to 8007 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
611.4 bits(1328) | 0.0 | 273/298(92%) | 0/298(0%) | Plus/Minus |
Query 2 RRINI*RLPTKYEAXXXXXXXXXXXXSPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHRSHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQIVPQCNRQLRSVHPVVEEPPFIHYIFQTLYARSKDAGEKRSYASIVVDYILPRYVLRQWRIVQLGFYVCFHHKRIRRQHRRMKDKRT*SPLERLVSVRCPFVQPI**QHRVAGQMAFRHLC*TSFVNDLLEENLLQFMRHRVITTHVTTAIGVEIPVLKRYQVAL*CVALR*TYTRP 895 RRINI RLPTKY+AIIT NYNITII*SPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHRSHDAIILTTKESRQNFSINTKCQEYQLLHL HESTLRFVVLTDIQFIGVVLPDVPQIVPQC+RQLRSVHPVVEEPPF+HY+F LYARSK+A +KRSYA IVVDYILPRYVLRQWRIVQLGFYVCFHH+RIR QHRRMKDKRT*SPLERLVSVRCPFVQPI**QHRVAGQMAFRHLC*TSFVNDLLEENLLQFMRHRV+TTHVTTAIGVEIP+ KR +V L VAL *TY RP Subject 7114 RRINIQRLPTKYKAIITANYNITII*SPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHRSHDAIILTTKESRQNFSINTKCQEYQLLHLLHESTLRFVVLTDIQFIGVVLPDVPQIVPQCSRQLRSVHPVVEEPPFVHYVF*ALYARSKNARKKRSYAPIVVDYILPRYVLRQWRIVQLGFYVCFHHERIRSQHRRMKDKRT*SPLERLVSVRCPFVQPI**QHRVAGQMAFRHLC*TSFVNDLLEENLLQFMRHRVVTTHVTTAIGVEIPIFKRDEVTLQGVALW*TYARP 8007
Range 4: 7116 to 8006 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
583.0 bits(1266) | 0.0 | 274/297(92%) | 0/297(0%) | Minus/Plus |
Query 3 V*CRFTEAQHIKVQPGNV*EQEFQRRSRL*RGL**LCGA*TEGDFLXXXXXXXXXXXGDGKPFVQQHDVVIRLVGQKGT*RLQVSQAGFRFVCLSSVYVDVLYAYGESRRKTQVGQYAIVEVRNGAEYSLPR*TRNCAFLLHLYCVRRAFEICSG*KVALLPRDGHCGVGGCIEEQFGGHPAILHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RRENDDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YV 893 V* RFT+AQH++V P +V*+ EFQRRSRL*RGL* LCGA*TEGDFLRGGR*QSSFSRGDGKPFVQQHDVVIRLVGQKGT*RLQVSQAGFRFVCLSSVYVD LYA+GESRRKTQVGQYAIVEVRNGAEYSLPR* RNCAF LH YCVRRA +I SG KVALLPRDGHCGVGGCIEEQFGGHPAILHL*TGYQ*VRQISECSHE GGGVDTLDTWC**RSFVYFLLW*V**RRENDDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS* ***P+I*SAAV Y*YV Subject 7116 V*RRFTKAQHLEV*PRHV*K*EFQRRSRL*RGL*RLCGA*TEGDFLRGGR*QSSFSRGDGKPFVQQHDVVIRLVGQKGT*RLQVSQAGFRFVCLSSVYVDFLYAHGESRRKTQVGQYAIVEVRNGAEYSLPR*VRNCAFFLHFYCVRRALKIRSGRKVALLPRDGHCGVGGCIEEQFGGHPAILHL*TGYQ*VRQISECSHEAGGGVDTLDTWC**RSFVYFLLW*V**RRENDDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*R***PYI*SAAVGY*YV 8006
Range 5: 7380 to 7670 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
218.3 bits(470) | 0.0 | 93/97(96%) | 0/97(0%) | Plus/Minus |
Query 339 V*YCRMSPKLFLNATANSAVSIPW*KSHLSSTTYFKRSTHAVKMQEKSAVTRLSW*TIFCPVTYFDNGVLSNLGFTSAFTISV*DVNIDG*KTNEPK 629 V*YCRMSPKLFLNA ANSAVSIPW*KSHLSSTTYFKRSTHAVKMQEKSAVT LSW*TIFCPVTYFDNGVLSNLGFTSAFT+SV*+VNIDG*KTNEPK Subject 7380 V*YCRMSPKLFLNAAANSAVSIPW*KSHLSSTTYFKRSTHAVKMQEKSAVTHLSW*TIFCPVTYFDNGVLSNLGFTSAFTMSV*EVNIDG*KTNEPK 7670
Range 6: 7710 to 7931 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
175.2 bits(376) | 0.0 | 74/74(100%) | 0/74(0%) | Plus/Minus |
Query 78 NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA 299 NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA Subject 7710 NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA 7931
Range 7: 7116 to 7340 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
171.5 bits(368) | 0.0 | 74/75(99%) | 0/75(0%) | Plus/Minus |
Query 669 SNQSDNNIVLLDKWLSVTSAKRALLTTSSKKISFSSCATESSQPTLQPRSALKFLFSNVTRLHFNVLRFGKPTLD 893 SNQSDNNIVLLDKWLSVTSAKRALLTTSSKKISFSSCATESSQPTLQPRSALKFLFSNVTRLHF VLRFGKPTLD Subject 7116 SNQSDNNIVLLDKWLSVTSAKRALLTTSSKKISFSSCATESSQPTLQPRSALKFLFSNVTRLHFKVLRFGKPTLD 7340
Range 8: 7968 to 8006 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
32.2 bits(64) | 0.0 | 12/13(92%) | 0/13(0%) | Plus/Minus |
Query 3 DVSISNGCRLNMR 41 DVSISNGCRLN+R Subject 7968 DVSISNGCRLNIR 8006
Range 9: 7517 to 7930 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
302.6 bits(654) | 0.0 | 131/138(95%) | 0/138(0%) | Minus/Plus |
Query 79 A*LRFSPASLLRA*SV*NM*WMKGGSSTTGWTLRSWRLH*GTIWGTSGNTTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*ER*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD 492 A*LRF A LLRA*S *N *W KGGSSTTGWTLRSWRLH*GTIWGTSGNTTPMNWISVSTTNLRVLS*+RWRS*YS*HLVLIEKFCLLSFVVSMIAS*ER*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD Subject 7517 A*LRFFLAFLLRA*SA*NT*WTKGGSSTTGWTLRSWRLH*GTIWGTSGNTTPMNWISVSTTNLRVLS*SRWRS*YS*HLVLIEKFCLLSFVVSMIAS*ER*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD 7930
Range 10: 7115 to 7351 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
137.2 bits(293) | 0.0 | 70/79(89%) | 0/79(0%) | Minus/Plus |
Query 658 GLV*VYRSATH*SATW*RLRTGISTPIAVVTWVVMTLWRMNXXXXXXXXSLTKLV*QR*RKAICPATRCCYQIGWTKGH 894 GL *VY+SAT *S T RL+ GISTPIAVVTWVV TLWRMN*RRFSSRRSLTKLV*QR*RKAICPATRCCYQIGWTKGH Subject 7115 GLA*VYQSATP*SVTSSRLKIGISTPIAVVTWVVTTLWRMN*RRFSSRRSLTKLV*QR*RKAICPATRCCYQIGWTKGH 7351
Grapevine leafroll associated virus 3 isolate 621, complete genome
Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 12
Range 1: 7696 to 8586 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
666.4 bits(1448) | 0.0 | 295/297(99%) | 0/297(0%) | Minus/Plus |
Query 2 SSVGLPKRNTLKCNLVTFENRNFNADRGCNVGCDDSVAHELKEIFFEEVVNKARLAEVTESHLSSNTMLLSDWLDKRAPNAYKSLKRALGSFVFHPSMLTSYTLMVKADVKPKLDNTPLSKYVTGQNIVYHDRRVTALFSCIFTACVERLKYVVDERWLFYHGMDTAELAVALRNNLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNXXXXXXXXXXXLRGLDYSYIVVSGDDSLIFSRQPLDIDTS 892 SSVGLPKRNTLKCNLVTFENRNFNADRGCNVGCDDSVAHELKEIFFEEVVNKARLAEVTESHLSSNTMLLSDWLDKRAPNAYKSLKRALGSFVFHPSMLTSYTLMVKADVKPKLDNTPLSKYVTGQNIVYHDR VTALFSCIFTACVERLKYVVDERWLFYHGMDTAELA ALRNNLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNSLVLCTLLSVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTS Subject 7696 SSVGLPKRNTLKCNLVTFENRNFNADRGCNVGCDDSVAHELKEIFFEEVVNKARLAEVTESHLSSNTMLLSDWLDKRAPNAYKSLKRALGSFVFHPSMLTSYTLMVKADVKPKLDNTPLSKYVTGQNIVYHDRCVTALFSCIFTACVERLKYVVDERWLFYHGMDTAELAAALRNNLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNSLVLCTLLSVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTS 8586
Range 2: 7694 to 8587 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
646.7 bits(1405) | 0.0 | 279/298(94%) | 0/298(0%) | Plus/Minus |
Query 1 PTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSSFSRRYHTHHKRK*TKLLYQHQXXXXXXXXXXXXEHSEICRTY*YPVHRCSIAGCPPNCSSMQPPTPQCPSRGRRATFHPLHISNALRTQ*RCRRKAQLRVYRGRLYSAPLRTSTMAYCPTWVLRLLSP*AYKTST*TDERQTNLKPA*ETCKR*VPFCPTNLITTSCCWTNGFPSPLLNELC*RPPRRKSPSVHAPQSHHNPRYNRDRR*NSCSQTLPGCTLMCCASVNLH*T 894 PTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSSFSRRYHTHHKRK*TKLLYQHQVSRVSTPPPVS*EHSEICRTY*YPVHRCSIAGCPPNCSSMQPPTPQCPSRGRRATF L I +ALRTQ*+C++KAQLR YRGRLYSAPLRTSTMAYCPTWVLRLLSP*AYKTST*TDERQTNLKPA*ETCKR*VPFCPTNLITTSCCWTNGFPSPLLNELC*RPPRRKSPSVHAPQS HNPRYNRDRR*NS QT G T CCA VNL *T Subject 7694 PTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSSFSRRYHTHHKRK*TKLLYQHQVSRVSTPPPVS*EHSEICRTY*YPVHRCSIAGCPPNCSSMQPPTPQCPSRGRRATFRLLRILSALRTQ*KCKKKAQLRTYRGRLYSAPLRTSTMAYCPTWVLRLLSP*AYKTST*TDERQTNLKPA*ETCKR*VPFCPTNLITTSCCWTNGFPSPLLNELC*RPPRRKSPSVHAPQSRHNPRYNRDRR*NSYFQT*RGYTSRCCALVNLR*T 8587
Range 3: 7693 to 8586 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
618.3 bits(1343) | 0.0 | 277/298(93%) | 0/298(0%) | Plus/Minus |
Query 2 RRINI*RLPTKYEAXXXXXXXXXXXXSPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHRSHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQIVPQCNRQLRSVHPVVEEPPFIHYIFQTLYARSKDAGEKRSYASIVVDYILPRYVLRQWRIVQLGFYVCFHHKRIRRQHRRMKDKRT*SPLERLVSVRCPFVQPI**QHRVAGQMAFRHLC*TSFVNDLLEENLLQFMRHRVITTHVTTAIGVEIPVLKRYQVAL*CVALR*TYTRP 895 RRINI*RLPTKYEAIITTNYNITII*SPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHRSHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQIVPQC+RQLRSVHPVVEEPPF++Y+F LYARSK+A +KRSYA IVVDYILPRYVLRQWRIVQLGFYVCFHH+RIRRQHRRMKDKRT*SPLERLVSVRCPFVQPI**QHRVAGQMAFRHLC*TSFVNDLLEENLLQFMRHRV+TTHVTTAIGVEIP+ KR +V L VAL *TY RP Subject 7693 RRINI*RLPTKYEAIITTNYNITII*SPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHRSHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQIVPQCSRQLRSVHPVVEEPPFVYYVF*ALYARSKNARKKRSYAPIVVDYILPRYVLRQWRIVQLGFYVCFHHERIRRQHRRMKDKRT*SPLERLVSVRCPFVQPI**QHRVAGQMAFRHLC*TSFVNDLLEENLLQFMRHRVVTTHVTTAIGVEIPIFKRDEVTLQGVALW*TYARP 8586
Range 4: 7695 to 8585 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
596.3 bits(1295) | 0.0 | 278/297(94%) | 0/297(0%) | Minus/Plus |
Query 3 V*CRFTEAQHIKVQPGNV*EQEFQRRSRL*RGL**LCGA*TEGDFLXXXXXXXXXXXGDGKPFVQQHDVVIRLVGQKGT*RLQVSQAGFRFVCLSSVYVDVLYAYGESRRKTQVGQYAIVEVRNGAEYSLPR*TRNCAFLLHLYCVRRAFEICSG*KVALLPRDGHCGVGGCIEEQFGGHPAILHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RRENDDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YV 893 V* RFT+AQH++V P +V*+ EFQRRSRL*RGL* LCGA*TEGDFLRGGR*QSSFSRGDGKPFVQQHDVVIRLVGQKGT*RLQVSQAGFRFVCLSSVYVDVLYA+GESRRKTQVGQYAIVEVRNGAEYSLPR* RNCAF LH YCVRRA +I S KVALLPRDGHCGVGGCIEEQFGGHPAILHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RRENDDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YV Subject 7695 V*RRFTKAQHLEV*PRHV*K*EFQRRSRL*RGL*RLCGA*TEGDFLRGGR*QSSFSRGDGKPFVQQHDVVIRLVGQKGT*RLQVSQAGFRFVCLSSVYVDVLYAHGESRRKTQVGQYAIVEVRNGAEYSLPR*VRNCAFFLHFYCVRRALKIRSRRKVALLPRDGHCGVGGCIEEQFGGHPAILHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RRENDDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YV 8585
Range 5: 7959 to 8249 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
220.1 bits(474) | 0.0 | 94/97(97%) | 0/97(0%) | Plus/Minus |
Query 339 V*YCRMSPKLFLNATANSAVSIPW*KSHLSSTTYFKRSTHAVKMQEKSAVTRLSW*TIFCPVTYFDNGVLSNLGFTSAFTISV*DVNIDG*KTNEPK 629 V*YCRMSPKLFLNA ANSAVSIPW*KSHLSSTTYFKRSTHAVKMQEKSAVT LSW*TIFCPVTYFDNGVLSNLGFTSAFT+SV*DVNIDG*KTNEPK Subject 7959 V*YCRMSPKLFLNAAANSAVSIPW*KSHLSSTTYFKRSTHAVKMQEKSAVTHLSW*TIFCPVTYFDNGVLSNLGFTSAFTMSV*DVNIDG*KTNEPK 8249
Range 6: 8289 to 8510 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
175.2 bits(376) | 0.0 | 74/74(100%) | 0/74(0%) | Plus/Minus |
Query 78 NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA 299 NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA Subject 8289 NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA 8510
Range 7: 7695 to 7919 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
171.5 bits(368) | 0.0 | 74/75(99%) | 0/75(0%) | Plus/Minus |
Query 669 SNQSDNNIVLLDKWLSVTSAKRALLTTSSKKISFSSCATESSQPTLQPRSALKFLFSNVTRLHFNVLRFGKPTLD 893 SNQSDNNIVLLDKWLSVTSAKRALLTTSSKKISFSSCATESSQPTLQPRSALKFLFSNVTRLHF VLRFGKPTLD Subject 7695 SNQSDNNIVLLDKWLSVTSAKRALLTTSSKKISFSSCATESSQPTLQPRSALKFLFSNVTRLHFKVLRFGKPTLD 7919
Range 8: 8547 to 8585 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
34.1 bits(68) | 0.0 | 13/13(100%) | 0/13(0%) | Plus/Minus |
Query 3 DVSISNGCRLNMR 41 DVSISNGCRLNMR Subject 8547 DVSISNGCRLNMR 8585
Range 9: 8096 to 8509 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
298.0 bits(644) | 0.0 | 131/138(95%) | 0/138(0%) | Minus/Plus |
Query 79 A*LRFSPASLLRA*SV*NM*WMKGGSSTTGWTLRSWRLH*GTIWGTSGNTTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*ER*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD 492 A*LRF A LLRA*S *N * KGGSSTTGWTLRSWRLH*GTIWGTSGNTTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*ER*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD Subject 8096 A*LRFFLAFLLRA*SA*NT**TKGGSSTTGWTLRSWRLH*GTIWGTSGNTTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*ER*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD 8509
Range 10: 7694 to 7930 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
137.2 bits(293) | 0.0 | 70/79(89%) | 0/79(0%) | Minus/Plus |
Query 658 GLV*VYRSATH*SATW*RLRTGISTPIAVVTWVVMTLWRMNXXXXXXXXSLTKLV*QR*RKAICPATRCCYQIGWTKGH 894 GL *VY+SAT *S T RL+ GISTPIAVVTWVV TLWRMN*RRFSSRRSLTKLV*QR*RKAICPATRCCYQIGWTKGH Subject 7694 GLA*VYQSATP*SVTSSRLKIGISTPIAVVTWVVTTLWRMN*RRFSSRRSLTKLV*QR*RKAICPATRCCYQIGWTKGH 7930
Grapevine leafroll associated virus 3 isolate WA MR, complete genome
Sequence ID: GU983863.1 Length: 18498 Number of Matches: 12
Range 1: 7696 to 8586 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
666.4 bits(1448) | 0.0 | 295/297(99%) | 0/297(0%) | Minus/Plus |
Query 2 SSVGLPKRNTLKCNLVTFENRNFNADRGCNVGCDDSVAHELKEIFFEEVVNKARLAEVTESHLSSNTMLLSDWLDKRAPNAYKSLKRALGSFVFHPSMLTSYTLMVKADVKPKLDNTPLSKYVTGQNIVYHDRRVTALFSCIFTACVERLKYVVDERWLFYHGMDTAELAVALRNNLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNXXXXXXXXXXXLRGLDYSYIVVSGDDSLIFSRQPLDIDTS 892 SSVGLPKRNTLKCNLVTFENRNFNADRGCNVGCDDSVAHELKEIFFEEVVNKARLAEVTESHLSSNTMLLSDWLDKRAPNAYKSLKRALGSFVFHPSMLTSYTLMVKADVKPKLDNTPLSKYVTGQNIVYHDR VTALFSCIFTACVERLKYVVDERWLFYHGMDTAELA ALRNNLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNSLVLCTLLSVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTS Subject 7696 SSVGLPKRNTLKCNLVTFENRNFNADRGCNVGCDDSVAHELKEIFFEEVVNKARLAEVTESHLSSNTMLLSDWLDKRAPNAYKSLKRALGSFVFHPSMLTSYTLMVKADVKPKLDNTPLSKYVTGQNIVYHDRCVTALFSCIFTACVERLKYVVDERWLFYHGMDTAELAAALRNNLGDIRQYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVVRTMTKELVLSVGSQRRSGGANTWLGNSLVLCTLLSVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTS 8586
Range 2: 7694 to 8587 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
644.4 bits(1400) | 0.0 | 278/298(93%) | 0/298(0%) | Plus/Minus |
Query 1 PTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSSFSRRYHTHHKRK*TKLLYQHQXXXXXXXXXXXXEHSEICRTY*YPVHRCSIAGCPPNCSSMQPPTPQCPSRGRRATFHPLHISNALRTQ*RCRRKAQLRVYRGRLYSAPLRTSTMAYCPTWVLRLLSP*AYKTST*TDERQTNLKPA*ETCKR*VPFCPTNLITTSCCWTNGFPSPLLNELC*RPPRRKSPSVHAPQSHHNPRYNRDRR*NSCSQTLPGCTLMCCASVNLH*T 894 PTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSSFSRRYHTHHKRK*TKLLYQHQVSRVSTPPPVS*EHSEICRTY*YPVHRCS AGCPPNCSSMQPPTPQCPSRGRRATF L I +ALRTQ*+C++KAQLR YRGRLYSAPLRTSTMAYCPTWVLRLLSP*AYKTST*TDERQTNLKPA*ETCKR*VPFCPTNLITTSCCWTNGFPSPLLNELC*RPPRRKSPSVHAPQS HNPRYNRDRR*NS QT G T CCA VNL *T Subject 7694 PTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRTTRCTRLNYFPTTC*HHHCASESRQTTPIPSSSFSRRYHTHHKRK*TKLLYQHQVSRVSTPPPVS*EHSEICRTY*YPVHRCSTAGCPPNCSSMQPPTPQCPSRGRRATFRLLRILSALRTQ*KCKKKAQLRTYRGRLYSAPLRTSTMAYCPTWVLRLLSP*AYKTST*TDERQTNLKPA*ETCKR*VPFCPTNLITTSCCWTNGFPSPLLNELC*RPPRRKSPSVHAPQSRHNPRYNRDRR*NSYFQT*RGYTSRCCALVNLR*T 8587
Range 3: 7693 to 8586 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
618.3 bits(1343) | 0.0 | 277/298(93%) | 0/298(0%) | Plus/Minus |
Query 2 RRINI*RLPTKYEAXXXXXXXXXXXXSPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHRSHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQIVPQCNRQLRSVHPVVEEPPFIHYIFQTLYARSKDAGEKRSYASIVVDYILPRYVLRQWRIVQLGFYVCFHHKRIRRQHRRMKDKRT*SPLERLVSVRCPFVQPI**QHRVAGQMAFRHLC*TSFVNDLLEENLLQFMRHRVITTHVTTAIGVEIPVLKRYQVAL*CVALR*TYTRP 895 RRINI*RLPTKYEAIITTNYNITII*SPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHRSHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQIVPQC+RQLRSVHPVVEEPPF++Y+F LYARSK+A +KRSYA IVVDYILPRYVLRQWRIVQLGFYVCFHH+RIRRQHRRMKDKRT*SPLERLVSVRCPFVQPI**QHRVAGQMAFRHLC*TSFVNDLLEENLLQFMRHRV+TTHVTTAIGVEIP+ KR +V L VAL *TY RP Subject 7693 RRINI*RLPTKYEAIITTNYNITII*SPKYYGQQGAQD*TISQPRVSTTTAPLRADRQHQFLRHRSHDAIILTTKESRQNFSINTKCQEYQLLHLFHESTLRFVVLTDIQFIGVVLPDVPQIVPQCSRQLRSVHPVVEEPPFVYYVF*ALYARSKNARKKRSYAPIVVDYILPRYVLRQWRIVQLGFYVCFHHERIRRQHRRMKDKRT*SPLERLVSVRCPFVQPI**QHRVAGQMAFRHLC*TSFVNDLLEENLLQFMRHRVVTTHVTTAIGVEIPIFKRDEVTLQGVALW*TYARP 8586
Range 4: 7695 to 8585 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
595.8 bits(1294) | 0.0 | 277/297(93%) | 0/297(0%) | Minus/Plus |
Query 3 V*CRFTEAQHIKVQPGNV*EQEFQRRSRL*RGL**LCGA*TEGDFLXXXXXXXXXXXGDGKPFVQQHDVVIRLVGQKGT*RLQVSQAGFRFVCLSSVYVDVLYAYGESRRKTQVGQYAIVEVRNGAEYSLPR*TRNCAFLLHLYCVRRAFEICSG*KVALLPRDGHCGVGGCIEEQFGGHPAILHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RRENDDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YV 893 V* RFT+AQH++V P +V*+ EFQRRSRL*RGL* LCGA*TEGDFLRGGR*QSSFSRGDGKPFVQQHDVVIRLVGQKGT*RLQVSQAGFRFVCLSSVYVDVLYA+GESRRKTQVGQYAIVEVRNGAEYSLPR* RNCAF LH YCVRRA +I S KVALLPRDGHCGVGGCIEEQFGGHPA+LHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RRENDDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YV Subject 7695 V*RRFTKAQHLEV*PRHV*K*EFQRRSRL*RGL*RLCGA*TEGDFLRGGR*QSSFSRGDGKPFVQQHDVVIRLVGQKGT*RLQVSQAGFRFVCLSSVYVDVLYAHGESRRKTQVGQYAIVEVRNGAEYSLPR*VRNCAFFLHFYCVRRALKIRSRRKVALLPRDGHCGVGGCIEEQFGGHPAVLHL*TGYQ*VRQISECSHETGGGVDTLDTWC**RSFVYFLLW*V**RRENDDEGIGVVCRLSEAQWWC*HVVGK*FSLVHLVVRST*GIRL*LYCS*W***PHI*SAAVRY*YV 8585
Range 5: 7959 to 8249 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
220.1 bits(474) | 0.0 | 94/97(97%) | 0/97(0%) | Plus/Minus |
Query 339 V*YCRMSPKLFLNATANSAVSIPW*KSHLSSTTYFKRSTHAVKMQEKSAVTRLSW*TIFCPVTYFDNGVLSNLGFTSAFTISV*DVNIDG*KTNEPK 629 V*YCRMSPKLFLNA ANSAVSIPW*KSHLSSTTYFKRSTHAVKMQEKSAVT LSW*TIFCPVTYFDNGVLSNLGFTSAFT+SV*DVNIDG*KTNEPK Subject 7959 V*YCRMSPKLFLNAAANSAVSIPW*KSHLSSTTYFKRSTHAVKMQEKSAVTHLSW*TIFCPVTYFDNGVLSNLGFTSAFTMSV*DVNIDG*KTNEPK 8249
Range 6: 8289 to 8510 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
175.2 bits(376) | 0.0 | 74/74(100%) | 0/74(0%) | Plus/Minus |
Query 78 NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA 299 NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA Subject 8289 NPLSTTDNKVHKTKLFPNHVLAPPLRL*EPTDNTNSFVIVLTTLSYSPQKKVDKTSLSTPSVKSINSSTCFMRA 8510
Range 7: 7695 to 7919 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
171.5 bits(368) | 0.0 | 74/75(99%) | 0/75(0%) | Plus/Minus |
Query 669 SNQSDNNIVLLDKWLSVTSAKRALLTTSSKKISFSSCATESSQPTLQPRSALKFLFSNVTRLHFNVLRFGKPTLD 893 SNQSDNNIVLLDKWLSVTSAKRALLTTSSKKISFSSCATESSQPTLQPRSALKFLFSNVTRLHF VLRFGKPTLD Subject 7695 SNQSDNNIVLLDKWLSVTSAKRALLTTSSKKISFSSCATESSQPTLQPRSALKFLFSNVTRLHFKVLRFGKPTLD 7919
Range 8: 8547 to 8585 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
34.1 bits(68) | 0.0 | 13/13(100%) | 0/13(0%) | Plus/Minus |
Query 3 DVSISNGCRLNMR 41 DVSISNGCRLNMR Subject 8547 DVSISNGCRLNMR 8585
Range 9: 8096 to 8509 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
295.7 bits(639) | 0.0 | 130/138(94%) | 0/138(0%) | Minus/Plus |
Query 79 A*LRFSPASLLRA*SV*NM*WMKGGSSTTGWTLRSWRLH*GTIWGTSGNTTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*ER*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD 492 A*LRF A LLRA*S *N * KGGSSTTGWTLRSWRLH*GTIWGTSG+TTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*ER*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD Subject 8096 A*LRFFLAFLLRA*SA*NT**TKGGSSTTGWTLRSWRLH*GTIWGTSGSTTPMNWISVSTTNLRVLS*NRWRS*YS*HLVLIEKFCLLSFVVSMIAS*ER*RRNWCCLSALRGAVVVLTRGWEIV*SCAPCCP*YLGD 8509
Range 10: 7694 to 7930 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
137.2 bits(293) | 0.0 | 70/79(89%) | 0/79(0%) | Minus/Plus |
Query 658 GLV*VYRSATH*SATW*RLRTGISTPIAVVTWVVMTLWRMNXXXXXXXXSLTKLV*QR*RKAICPATRCCYQIGWTKGH 894 GL *VY+SAT *S T RL+ GISTPIAVVTWVV TLWRMN*RRFSSRRSLTKLV*QR*RKAICPATRCCYQIGWTKGH Subject 7694 GLA*VYQSATP*SVTSSRLKIGISTPIAVVTWVVTTLWRMN*RRFSSRRSLTKLV*QR*RKAICPATRCCYQIGWTKGH 7930
Nucleotide Sequence (354 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
258.6 | 1309.4 | 25% | 2.337e-67 | 99% | EU259806.1 | |
258.6 | 1309.4 | 25% | 2.337e-67 | 99% | KX756668.1 | |
258.6 | 1309.4 | 25% | 2.337e-67 | 99% | KX701860.1 | |
257.2 | 1307.1 | 25% | 6.061e-67 | 98% | KJ174518.1 | |
251.7 | 1298.9 | 25% | 2.74e-65 | 98% | GQ352632.1 |
Alignments
Grapevine leafroll associated virus 3 isolate GP18, complete genome
Sequence ID: EU259806.1 Length: 18498 Number of Matches: 8
Range 1: 8911 to 9225 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
258.6 bits(558) | 0.0 | 104/105(99%) | 0/105(0%) | Minus/Minus |
Query 40 WVFNTHFKKECHRY*PHGWHA*EKTTNWKTEISTTTLRY*PHEEPRHRNTIAWLTR*TPLYRKGITRSFPP*YSRLQGQQGKRLRPLNRAHVKIHAIVVI*PTEL 354 WVFNTHFKKECHRY*PHGWHA*EK TNWKTEISTTTLRY*PHEEPRHRNTIAWLTR*TPLYRKGITRSFPP*YSRLQGQQGKRLRPLNRAHVKIHAIVVI*PTEL Subject 8911 WVFNTHFKKECHRY*PHGWHA*EKMTNWKTEISTTTLRY*PHEEPRHRNTIAWLTR*TPLYRKGITRSFPP*YSRLQGQQGKRLRPLNRAHVKIHAIVVI*PTEL 9225
Range 2: 8911 to 9225 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
242.1 bits(522) | 0.0 | 104/105(99%) | 0/105(0%) | Plus/Plus |
Query 40 QFCRLYYHNSVNLDVRPIQRTESLSLLALKARILRWKASRYAFSIKRGLSR*PRYSVSVPRFFVRLIPKGRRTYLSLPVCRLLLGVPSVRLIPVALLLEVGIKDP 354 QFCRLYYHNSVNLDVRPIQRTESLSLLALKARILRWKASRYAFSIKRGLSR*PRYSVSVPRFFVRLIPKGRRTYLSLPVC LLLGVPSVRLIPVALLLEVGIKDP Subject 8911 QFCRLYYHNSVNLDVRPIQRTESLSLLALKARILRWKASRYAFSIKRGLSR*PRYSVSVPRFFVRLIPKGRRTYLSLPVCHLLLGVPSVRLIPVALLLEVGIKDP 9225
Range 3: 8924 to 9223 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
200.8 bits(432) | 0.0 | 99/100(99%) | 0/100(0%) | Plus/Plus |
Query 53 YITTIA*ILTCALFRGRSRFPCWP*RREY*GGKLLVMPFR*RGVYRVSHAIVFLCLGSS*G*YRRXXXXXXXXXXXXXS*ACHP*G*YRWHSFLKWVLKT 352 YITTIA*ILTCALFRGRSRFPCWP*RREY*GGKLLVMPFR*RGVYRVSHAIVFLCLGSS*G*YRRVVVLISVFQFV+FS*ACHP*G*YRWHSFLKWVLKT Subject 8924 YITTIA*ILTCALFRGRSRFPCWP*RREY*GGKLLVMPFR*RGVYRVSHAIVFLCLGSS*G*YRRVVVLISVFQFVIFS*ACHP*G*YRWHSFLKWVLKT 9223
Range 4: 8912 to 9118 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
162.8 bits(349) | 0.0 | 69/69(100%) | 0/69(0%) | Minus/Minus |
Query 41 PSVLTSRRTEAQKHYSVANAINPSLSKRHNEKLSTLIFSPSRPARKATPSSE*GARQDSRYCGNITYRT 247 PSVLTSRRTEAQKHYSVANAINPSLSKRHNEKLSTLIFSPSRPARKATPSSE*GARQDSRYCGNITYRT Subject 8912 PSVLTSRRTEAQKHYSVANAINPSLSKRHNEKLSTLIFSPSRPARKATPSSE*GARQDSRYCGNITYRT 9118
Range 5: 9159 to 9224 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.8 bits(111) | 0.0 | 22/22(100%) | 0/22(0%) | Minus/Minus |
Query 288 GSLIPTSRRSATGINLTDGTPK 353 GSLIPTSRRSATGINLTDGTPK Subject 9159 GSLIPTSRRSATGINLTDGTPK 9224
Range 6: 8925 to 9224 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
189.4 bits(407) | 0.0 | 100/100(100%) | 0/100(0%) | Plus/Plus |
Query 54 ILPQ*RES*RAPYSEDGVAFLAGLEGENIKVESFSLCLFDKEGFIALATL*CFCASVLREVNTEGXXXXXXXXXXXXXXRRAIREVNTGGTPS*SGY*RP 353 ILPQ*RES*RAPYSEDGVAFLAGLEGENIKVESFSLCLFDKEGFIALATL*CFCASVLREVNTEGSSYLSQSSSLSSSLRRAIREVNTGGTPS*SGY*RP Subject 8925 ILPQ*RES*RAPYSEDGVAFLAGLEGENIKVESFSLCLFDKEGFIALATL*CFCASVLREVNTEGSSYLSQSSSLSSSLRRAIREVNTGGTPS*SGY*RP 9224
Range 7: 8913 to 9119 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
155.9 bits(334) | 0.0 | 69/69(100%) | 0/69(0%) | Minus/Minus |
Query 42 PFGINLTKNRGTETL*RG*RDKPLFIEKA*REAFHLNILAFKASKESDSVL*IGRTSRFTLLW*YNLQN 248 PFGINLTKNRGTETL*RG*RDKPLFIEKA*REAFHLNILAFKASKESDSVL*IGRTSRFTLLW*YNLQN Subject 8913 PFGINLTKNRGTETL*RG*RDKPLFIEKA*REAFHLNILAFKASKESDSVL*IGRTSRFTLLW*YNLQN 9119
Grapevine leafroll associated virus 3 isolate TC BR, complete genome
Sequence ID: KX756668.1 Length: 18498 Number of Matches: 8
Range 1: 8911 to 9225 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
258.6 bits(558) | 0.0 | 104/105(99%) | 0/105(0%) | Minus/Minus |
Query 40 WVFNTHFKKECHRY*PHGWHA*EKTTNWKTEISTTTLRY*PHEEPRHRNTIAWLTR*TPLYRKGITRSFPP*YSRLQGQQGKRLRPLNRAHVKIHAIVVI*PTEL 354 WVFNTHFKKECHRY*PHGWHA*EK TNWKTEISTTTLRY*PHEEPRHRNTIAWLTR*TPLYRKGITRSFPP*YSRLQGQQGKRLRPLNRAHVKIHAIVVI*PTEL Subject 8911 WVFNTHFKKECHRY*PHGWHA*EKMTNWKTEISTTTLRY*PHEEPRHRNTIAWLTR*TPLYRKGITRSFPP*YSRLQGQQGKRLRPLNRAHVKIHAIVVI*PTEL 9225
Range 2: 8911 to 9225 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
242.1 bits(522) | 0.0 | 104/105(99%) | 0/105(0%) | Plus/Plus |
Query 40 QFCRLYYHNSVNLDVRPIQRTESLSLLALKARILRWKASRYAFSIKRGLSR*PRYSVSVPRFFVRLIPKGRRTYLSLPVCRLLLGVPSVRLIPVALLLEVGIKDP 354 QFCRLYYHNSVNLDVRPIQRTESLSLLALKARILRWKASRYAFSIKRGLSR*PRYSVSVPRFFVRLIPKGRRTYLSLPVC LLLGVPSVRLIPVALLLEVGIKDP Subject 8911 QFCRLYYHNSVNLDVRPIQRTESLSLLALKARILRWKASRYAFSIKRGLSR*PRYSVSVPRFFVRLIPKGRRTYLSLPVCHLLLGVPSVRLIPVALLLEVGIKDP 9225
Range 3: 8924 to 9223 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
200.8 bits(432) | 0.0 | 99/100(99%) | 0/100(0%) | Plus/Plus |
Query 53 YITTIA*ILTCALFRGRSRFPCWP*RREY*GGKLLVMPFR*RGVYRVSHAIVFLCLGSS*G*YRRXXXXXXXXXXXXXS*ACHP*G*YRWHSFLKWVLKT 352 YITTIA*ILTCALFRGRSRFPCWP*RREY*GGKLLVMPFR*RGVYRVSHAIVFLCLGSS*G*YRRVVVLISVFQFV+FS*ACHP*G*YRWHSFLKWVLKT Subject 8924 YITTIA*ILTCALFRGRSRFPCWP*RREY*GGKLLVMPFR*RGVYRVSHAIVFLCLGSS*G*YRRVVVLISVFQFVIFS*ACHP*G*YRWHSFLKWVLKT 9223
Range 4: 8912 to 9118 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
162.8 bits(349) | 0.0 | 69/69(100%) | 0/69(0%) | Minus/Minus |
Query 41 PSVLTSRRTEAQKHYSVANAINPSLSKRHNEKLSTLIFSPSRPARKATPSSE*GARQDSRYCGNITYRT 247 PSVLTSRRTEAQKHYSVANAINPSLSKRHNEKLSTLIFSPSRPARKATPSSE*GARQDSRYCGNITYRT Subject 8912 PSVLTSRRTEAQKHYSVANAINPSLSKRHNEKLSTLIFSPSRPARKATPSSE*GARQDSRYCGNITYRT 9118
Range 5: 9159 to 9224 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.8 bits(111) | 0.0 | 22/22(100%) | 0/22(0%) | Minus/Minus |
Query 288 GSLIPTSRRSATGINLTDGTPK 353 GSLIPTSRRSATGINLTDGTPK Subject 9159 GSLIPTSRRSATGINLTDGTPK 9224
Range 6: 8925 to 9224 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
189.4 bits(407) | 0.0 | 100/100(100%) | 0/100(0%) | Plus/Plus |
Query 54 ILPQ*RES*RAPYSEDGVAFLAGLEGENIKVESFSLCLFDKEGFIALATL*CFCASVLREVNTEGXXXXXXXXXXXXXXRRAIREVNTGGTPS*SGY*RP 353 ILPQ*RES*RAPYSEDGVAFLAGLEGENIKVESFSLCLFDKEGFIALATL*CFCASVLREVNTEGSSYLSQSSSLSSSLRRAIREVNTGGTPS*SGY*RP Subject 8925 ILPQ*RES*RAPYSEDGVAFLAGLEGENIKVESFSLCLFDKEGFIALATL*CFCASVLREVNTEGSSYLSQSSSLSSSLRRAIREVNTGGTPS*SGY*RP 9224
Range 7: 8913 to 9119 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
155.9 bits(334) | 0.0 | 69/69(100%) | 0/69(0%) | Minus/Minus |
Query 42 PFGINLTKNRGTETL*RG*RDKPLFIEKA*REAFHLNILAFKASKESDSVL*IGRTSRFTLLW*YNLQN 248 PFGINLTKNRGTETL*RG*RDKPLFIEKA*REAFHLNILAFKASKESDSVL*IGRTSRFTLLW*YNLQN Subject 8913 PFGINLTKNRGTETL*RG*RDKPLFIEKA*REAFHLNILAFKASKESDSVL*IGRTSRFTLLW*YNLQN 9119
Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome
Sequence ID: KX701860.1 Length: 18020 Number of Matches: 8
Range 1: 8429 to 8743 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
258.6 bits(558) | 0.0 | 104/105(99%) | 0/105(0%) | Minus/Minus |
Query 40 WVFNTHFKKECHRY*PHGWHA*EKTTNWKTEISTTTLRY*PHEEPRHRNTIAWLTR*TPLYRKGITRSFPP*YSRLQGQQGKRLRPLNRAHVKIHAIVVI*PTEL 354 WVFNTHFKKECHRY*PHGWHA*EK TNWKTEISTTTLRY*PHEEPRHRNTIAWLTR*TPLYRKGITRSFPP*YSRLQGQQGKRLRPLNRAHVKIHAIVVI*PTEL Subject 8429 WVFNTHFKKECHRY*PHGWHA*EKMTNWKTEISTTTLRY*PHEEPRHRNTIAWLTR*TPLYRKGITRSFPP*YSRLQGQQGKRLRPLNRAHVKIHAIVVI*PTEL 8743
Range 2: 8429 to 8743 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
242.1 bits(522) | 0.0 | 104/105(99%) | 0/105(0%) | Plus/Plus |
Query 40 QFCRLYYHNSVNLDVRPIQRTESLSLLALKARILRWKASRYAFSIKRGLSR*PRYSVSVPRFFVRLIPKGRRTYLSLPVCRLLLGVPSVRLIPVALLLEVGIKDP 354 QFCRLYYHNSVNLDVRPIQRTESLSLLALKARILRWKASRYAFSIKRGLSR*PRYSVSVPRFFVRLIPKGRRTYLSLPVC LLLGVPSVRLIPVALLLEVGIKDP Subject 8429 QFCRLYYHNSVNLDVRPIQRTESLSLLALKARILRWKASRYAFSIKRGLSR*PRYSVSVPRFFVRLIPKGRRTYLSLPVCHLLLGVPSVRLIPVALLLEVGIKDP 8743
Range 3: 8442 to 8741 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
200.8 bits(432) | 0.0 | 99/100(99%) | 0/100(0%) | Plus/Plus |
Query 53 YITTIA*ILTCALFRGRSRFPCWP*RREY*GGKLLVMPFR*RGVYRVSHAIVFLCLGSS*G*YRRXXXXXXXXXXXXXS*ACHP*G*YRWHSFLKWVLKT 352 YITTIA*ILTCALFRGRSRFPCWP*RREY*GGKLLVMPFR*RGVYRVSHAIVFLCLGSS*G*YRRVVVLISVFQFV+FS*ACHP*G*YRWHSFLKWVLKT Subject 8442 YITTIA*ILTCALFRGRSRFPCWP*RREY*GGKLLVMPFR*RGVYRVSHAIVFLCLGSS*G*YRRVVVLISVFQFVIFS*ACHP*G*YRWHSFLKWVLKT 8741
Range 4: 8430 to 8636 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
162.8 bits(349) | 0.0 | 69/69(100%) | 0/69(0%) | Minus/Minus |
Query 41 PSVLTSRRTEAQKHYSVANAINPSLSKRHNEKLSTLIFSPSRPARKATPSSE*GARQDSRYCGNITYRT 247 PSVLTSRRTEAQKHYSVANAINPSLSKRHNEKLSTLIFSPSRPARKATPSSE*GARQDSRYCGNITYRT Subject 8430 PSVLTSRRTEAQKHYSVANAINPSLSKRHNEKLSTLIFSPSRPARKATPSSE*GARQDSRYCGNITYRT 8636
Range 5: 8677 to 8742 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.8 bits(111) | 0.0 | 22/22(100%) | 0/22(0%) | Minus/Minus |
Query 288 GSLIPTSRRSATGINLTDGTPK 353 GSLIPTSRRSATGINLTDGTPK Subject 8677 GSLIPTSRRSATGINLTDGTPK 8742
Range 6: 8443 to 8742 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
189.4 bits(407) | 0.0 | 100/100(100%) | 0/100(0%) | Plus/Plus |
Query 54 ILPQ*RES*RAPYSEDGVAFLAGLEGENIKVESFSLCLFDKEGFIALATL*CFCASVLREVNTEGXXXXXXXXXXXXXXRRAIREVNTGGTPS*SGY*RP 353 ILPQ*RES*RAPYSEDGVAFLAGLEGENIKVESFSLCLFDKEGFIALATL*CFCASVLREVNTEGSSYLSQSSSLSSSLRRAIREVNTGGTPS*SGY*RP Subject 8443 ILPQ*RES*RAPYSEDGVAFLAGLEGENIKVESFSLCLFDKEGFIALATL*CFCASVLREVNTEGSSYLSQSSSLSSSLRRAIREVNTGGTPS*SGY*RP 8742
Range 7: 8431 to 8637 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
155.9 bits(334) | 0.0 | 69/69(100%) | 0/69(0%) | Minus/Minus |
Query 42 PFGINLTKNRGTETL*RG*RDKPLFIEKA*REAFHLNILAFKASKESDSVL*IGRTSRFTLLW*YNLQN 248 PFGINLTKNRGTETL*RG*RDKPLFIEKA*REAFHLNILAFKASKESDSVL*IGRTSRFTLLW*YNLQN Subject 8431 PFGINLTKNRGTETL*RG*RDKPLFIEKA*REAFHLNILAFKASKESDSVL*IGRTSRFTLLW*YNLQN 8637
Grapevine leafroll associated virus 3, complete genome
Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 8
Range 1: 8911 to 9225 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
257.2 bits(555) | 0.0 | 103/105(98%) | 0/105(0%) | Minus/Minus |
Query 40 WVFNTHFKKECHRY*PHGWHA*EKTTNWKTEISTTTLRY*PHEEPRHRNTIAWLTR*TPLYRKGITRSFPP*YSRLQGQQGKRLRPLNRAHVKIHAIVVI*PTEL 354 WVFNTHFKKECHRY*PHGWHA*+K TNWKTEISTTTLRY*PHEEPRHRNTIAWLTR*TPLYRKGITRSFPP*YSRLQGQQGKRLRPLNRAHVKIHAIVVI*PTEL Subject 8911 WVFNTHFKKECHRY*PHGWHA*DKMTNWKTEISTTTLRY*PHEEPRHRNTIAWLTR*TPLYRKGITRSFPP*YSRLQGQQGKRLRPLNRAHVKIHAIVVI*PTEL 9225
Range 2: 8911 to 9225 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
241.2 bits(520) | 0.0 | 103/105(98%) | 0/105(0%) | Plus/Plus |
Query 40 QFCRLYYHNSVNLDVRPIQRTESLSLLALKARILRWKASRYAFSIKRGLSR*PRYSVSVPRFFVRLIPKGRRTYLSLPVCRLLLGVPSVRLIPVALLLEVGIKDP 354 QFCRLYYHNSVNLDVRPIQRTESLSLLALKARILRWKASRYAFSIKRGLSR*PRYSVSVPRFFVRLIPKGRRTYLSLPVC L+LGVPSVRLIPVALLLEVGIKDP Subject 8911 QFCRLYYHNSVNLDVRPIQRTESLSLLALKARILRWKASRYAFSIKRGLSR*PRYSVSVPRFFVRLIPKGRRTYLSLPVCHLILGVPSVRLIPVALLLEVGIKDP 9225
Range 3: 8924 to 9223 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
200.8 bits(432) | 0.0 | 98/100(98%) | 0/100(0%) | Plus/Plus |
Query 53 YITTIA*ILTCALFRGRSRFPCWP*RREY*GGKLLVMPFR*RGVYRVSHAIVFLCLGSS*G*YRRXXXXXXXXXXXXXS*ACHP*G*YRWHSFLKWVLKT 352 YITTIA*ILTCALFRGRSRFPCWP*RREY*GGKLLVMPFR*RGVYRVSHAIVFLCLGSS*G*YRRVVVLISVFQFV+ S*ACHP*G*YRWHSFLKWVLKT Subject 8924 YITTIA*ILTCALFRGRSRFPCWP*RREY*GGKLLVMPFR*RGVYRVSHAIVFLCLGSS*G*YRRVVVLISVFQFVILS*ACHP*G*YRWHSFLKWVLKT 9223
Range 4: 8912 to 9118 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
162.8 bits(349) | 0.0 | 69/69(100%) | 0/69(0%) | Minus/Minus |
Query 41 PSVLTSRRTEAQKHYSVANAINPSLSKRHNEKLSTLIFSPSRPARKATPSSE*GARQDSRYCGNITYRT 247 PSVLTSRRTEAQKHYSVANAINPSLSKRHNEKLSTLIFSPSRPARKATPSSE*GARQDSRYCGNITYRT Subject 8912 PSVLTSRRTEAQKHYSVANAINPSLSKRHNEKLSTLIFSPSRPARKATPSSE*GARQDSRYCGNITYRT 9118
Range 5: 9159 to 9224 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.8 bits(111) | 0.0 | 22/22(100%) | 0/22(0%) | Minus/Minus |
Query 288 GSLIPTSRRSATGINLTDGTPK 353 GSLIPTSRRSATGINLTDGTPK Subject 9159 GSLIPTSRRSATGINLTDGTPK 9224
Range 6: 8925 to 9224 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
189.4 bits(407) | 0.0 | 99/100(99%) | 0/100(0%) | Plus/Plus |
Query 54 ILPQ*RES*RAPYSEDGVAFLAGLEGENIKVESFSLCLFDKEGFIALATL*CFCASVLREVNTEGXXXXXXXXXXXXXXRRAIREVNTGGTPS*SGY*RP 353 ILPQ*RES*RAPYSEDGVAFLAGLEGENIKVESFSLCLFDKEGFIALATL*CFCASVLREVNTEGSSYLSQSSSLSS LRRAIREVNTGGTPS*SGY*RP Subject 8925 ILPQ*RES*RAPYSEDGVAFLAGLEGENIKVESFSLCLFDKEGFIALATL*CFCASVLREVNTEGSSYLSQSSSLSSYLRRAIREVNTGGTPS*SGY*RP 9224
Range 7: 8913 to 9119 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
155.9 bits(334) | 0.0 | 69/69(100%) | 0/69(0%) | Minus/Minus |
Query 42 PFGINLTKNRGTETL*RG*RDKPLFIEKA*REAFHLNILAFKASKESDSVL*IGRTSRFTLLW*YNLQN 248 PFGINLTKNRGTETL*RG*RDKPLFIEKA*REAFHLNILAFKASKESDSVL*IGRTSRFTLLW*YNLQN Subject 8913 PFGINLTKNRGTETL*RG*RDKPLFIEKA*REAFHLNILAFKASKESDSVL*IGRTSRFTLLW*YNLQN 9119
Grapevine leafroll associated virus 3 isolate 623, complete genome
Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 8
Range 1: 8911 to 9225 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
251.7 bits(543) | 0.0 | 103/105(98%) | 0/105(0%) | Minus/Minus |
Query 40 WVFNTHFKKECHRY*PHGWHA*EKTTNWKTEISTTTLRY*PHEEPRHRNTIAWLTR*TPLYRKGITRSFPP*YSRLQGQQGKRLRPLNRAHVKIHAIVVI*PTEL 354 WVFNTHFKKECHRY*PHGWHA*EK TN KTEISTTTLRY*PHEEPRHRNTIAWLTR*TPLYRKGITRSFPP*YSRLQGQQGKRLRPLNRAHVKIHAIVVI*PTEL Subject 8911 WVFNTHFKKECHRY*PHGWHA*EKMTN*KTEISTTTLRY*PHEEPRHRNTIAWLTR*TPLYRKGITRSFPP*YSRLQGQQGKRLRPLNRAHVKIHAIVVI*PTEL 9225
Range 2: 8911 to 9225 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
238.4 bits(514) | 0.0 | 103/105(98%) | 0/105(0%) | Plus/Plus |
Query 40 QFCRLYYHNSVNLDVRPIQRTESLSLLALKARILRWKASRYAFSIKRGLSR*PRYSVSVPRFFVRLIPKGRRTYLSLPVCRLLLGVPSVRLIPVALLLEVGIKDP 354 QFCRLYYHNSVNLDVRPIQRTESLSLLALKARILRWKASRYAFSIKRGLSR*PRYSVSVPRFFVRLIPKGRRTYLSL VC LLLGVPSVRLIPVALLLEVGIKDP Subject 8911 QFCRLYYHNSVNLDVRPIQRTESLSLLALKARILRWKASRYAFSIKRGLSR*PRYSVSVPRFFVRLIPKGRRTYLSLSVCHLLLGVPSVRLIPVALLLEVGIKDP 9225
Range 3: 8924 to 9223 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
200.8 bits(432) | 0.0 | 99/100(99%) | 0/100(0%) | Plus/Plus |
Query 53 YITTIA*ILTCALFRGRSRFPCWP*RREY*GGKLLVMPFR*RGVYRVSHAIVFLCLGSS*G*YRRXXXXXXXXXXXXXS*ACHP*G*YRWHSFLKWVLKT 352 YITTIA*ILTCALFRGRSRFPCWP*RREY*GGKLLVMPFR*RGVYRVSHAIVFLCLGSS*G*YRRVVVLISVFQFV+FS*ACHP*G*YRWHSFLKWVLKT Subject 8924 YITTIA*ILTCALFRGRSRFPCWP*RREY*GGKLLVMPFR*RGVYRVSHAIVFLCLGSS*G*YRRVVVLISVFQFVIFS*ACHP*G*YRWHSFLKWVLKT 9223
Range 4: 8912 to 9118 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
162.8 bits(349) | 0.0 | 69/69(100%) | 0/69(0%) | Minus/Minus |
Query 41 PSVLTSRRTEAQKHYSVANAINPSLSKRHNEKLSTLIFSPSRPARKATPSSE*GARQDSRYCGNITYRT 247 PSVLTSRRTEAQKHYSVANAINPSLSKRHNEKLSTLIFSPSRPARKATPSSE*GARQDSRYCGNITYRT Subject 8912 PSVLTSRRTEAQKHYSVANAINPSLSKRHNEKLSTLIFSPSRPARKATPSSE*GARQDSRYCGNITYRT 9118
Range 5: 9159 to 9224 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.8 bits(111) | 0.0 | 22/22(100%) | 0/22(0%) | Minus/Minus |
Query 288 GSLIPTSRRSATGINLTDGTPK 353 GSLIPTSRRSATGINLTDGTPK Subject 9159 GSLIPTSRRSATGINLTDGTPK 9224
Range 6: 8925 to 9224 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
189.4 bits(407) | 0.0 | 99/100(99%) | 0/100(0%) | Plus/Plus |
Query 54 ILPQ*RES*RAPYSEDGVAFLAGLEGENIKVESFSLCLFDKEGFIALATL*CFCASVLREVNTEGXXXXXXXXXXXXXXRRAIREVNTGGTPS*SGY*RP 353 ILPQ*RES*RAPYSEDGVAFLAGLEGENIKVESFSLCLFDKEGFIALATL*CFCASVLREVNTEGSSYLSQS SLSSSLRRAIREVNTGGTPS*SGY*RP Subject 8925 ILPQ*RES*RAPYSEDGVAFLAGLEGENIKVESFSLCLFDKEGFIALATL*CFCASVLREVNTEGSSYLSQSFSLSSSLRRAIREVNTGGTPS*SGY*RP 9224
Range 7: 8913 to 9119 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
155.9 bits(334) | 0.0 | 69/69(100%) | 0/69(0%) | Minus/Minus |
Query 42 PFGINLTKNRGTETL*RG*RDKPLFIEKA*REAFHLNILAFKASKESDSVL*IGRTSRFTLLW*YNLQN 248 PFGINLTKNRGTETL*RG*RDKPLFIEKA*REAFHLNILAFKASKESDSVL*IGRTSRFTLLW*YNLQN Subject 8913 PFGINLTKNRGTETL*RG*RDKPLFIEKA*REAFHLNILAFKASKESDSVL*IGRTSRFTLLW*YNLQN 9119
Nucleotide Sequence (164 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
132.1 | 692.5 | 23% | 3.99e-30 | 96% | HQ130295.1 | |
132.1 | 692.5 | 23% | 3.99e-30 | 96% | HQ130297.1 | |
132.1 | 692.5 | 23% | 3.99e-30 | 96% | HQ130300.1 | |
132.1 | 692.5 | 23% | 3.99e-30 | 96% | HQ130301.1 | |
132.1 | 692.5 | 23% | 3.99e-30 | 96% | HQ130303.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 6 6 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130295.1 Length: 4711 Number of Matches: 7
Range 1: 3535 to 3696 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.1 bits(282) | 0.0 | 52/54(96%) | 0/54(0%) | Minus/Minus |
Query 2 AERICTIINDRSMML*PRDEICKCCSTFPPPCLPTQTSFKESTRPNPRFSPDKI 163 AERICTIINDRSMML*PRDEI KCCSTFPPPCLPTQTSFKEST PNPRFSPDKI Subject 3535 AERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI 3696
Range 2: 3534 to 3695 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.4 bits(274) | 0.0 | 53/54(98%) | 0/54(0%) | Plus/Plus |
Query 1 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTYKSHLWVKASWTYRLLLCRSFP 162 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY SHLWVKASWTYRLLLCRSFP Subject 3534 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFP 3695
Range 3: 3534 to 3695 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
119.7 bits(255) | 0.0 | 52/54(96%) | 0/54(0%) | Minus/Minus |
Query 1 RKGSAQ**TIGP*CFNPEMRFVSAVVRFHLLVYLRKLASRNLRAPILDSPQTKY 162 RKGSAQ**TIGP*CFNPEMR VSAVVRFHLLVYLRKLASRNLR PILDSPQTKY Subject 3534 RKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY 3695
Range 4: 3536 to 3697 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
114.2 bits(243) | 0.0 | 52/54(96%) | 0/54(0%) | Plus/Plus |
Query 3 ILSGENRGLGRVDSLKLVCVGRQGGGNVLQHLQISSLG*SIMDLSFIIVQILSA 164 ILSGENRGLG VDSLKLVCVGRQGGGNVLQHL ISSLG*SIMDLSFIIVQILSA Subject 3536 ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSA 3697
Range 5: 3535 to 3696 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.4 bits(215) | 0.0 | 53/54(98%) | 0/54(0%) | Plus/Plus |
Query 2 YFVWGESRIGARRFLEASLXXXXXXXXXXXALTNLISGLKHHGPIVYYCADPFR 163 YFVWGESRIG RRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFR Subject 3535 YFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFR 3696
Grapevine leafroll associated virus 3 isolate 6 11 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130297.1 Length: 4711 Number of Matches: 7
Range 1: 3535 to 3696 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.1 bits(282) | 0.0 | 52/54(96%) | 0/54(0%) | Minus/Minus |
Query 2 AERICTIINDRSMML*PRDEICKCCSTFPPPCLPTQTSFKESTRPNPRFSPDKI 163 AERICTIINDRSMML*PRDEI KCCSTFPPPCLPTQTSFKEST PNPRFSPDKI Subject 3535 AERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI 3696
Range 2: 3534 to 3695 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.4 bits(274) | 0.0 | 53/54(98%) | 0/54(0%) | Plus/Plus |
Query 1 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTYKSHLWVKASWTYRLLLCRSFP 162 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY SHLWVKASWTYRLLLCRSFP Subject 3534 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFP 3695
Range 3: 3534 to 3695 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
119.7 bits(255) | 0.0 | 52/54(96%) | 0/54(0%) | Minus/Minus |
Query 1 RKGSAQ**TIGP*CFNPEMRFVSAVVRFHLLVYLRKLASRNLRAPILDSPQTKY 162 RKGSAQ**TIGP*CFNPEMR VSAVVRFHLLVYLRKLASRNLR PILDSPQTKY Subject 3534 RKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY 3695
Range 4: 3536 to 3697 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
114.2 bits(243) | 0.0 | 52/54(96%) | 0/54(0%) | Plus/Plus |
Query 3 ILSGENRGLGRVDSLKLVCVGRQGGGNVLQHLQISSLG*SIMDLSFIIVQILSA 164 ILSGENRGLG VDSLKLVCVGRQGGGNVLQHL ISSLG*SIMDLSFIIVQILSA Subject 3536 ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSA 3697
Range 5: 3535 to 3696 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.4 bits(215) | 0.0 | 53/54(98%) | 0/54(0%) | Plus/Plus |
Query 2 YFVWGESRIGARRFLEASLXXXXXXXXXXXALTNLISGLKHHGPIVYYCADPFR 163 YFVWGESRIG RRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFR Subject 3535 YFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFR 3696
Grapevine leafroll associated virus 3 isolate 6 18 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130300.1 Length: 4711 Number of Matches: 7
Range 1: 3535 to 3696 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.1 bits(282) | 0.0 | 52/54(96%) | 0/54(0%) | Minus/Minus |
Query 2 AERICTIINDRSMML*PRDEICKCCSTFPPPCLPTQTSFKESTRPNPRFSPDKI 163 AERICTIINDRSMML*PRDEI KCCSTFPPPCLPTQTSFKEST PNPRFSPDKI Subject 3535 AERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI 3696
Range 2: 3534 to 3695 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.4 bits(274) | 0.0 | 53/54(98%) | 0/54(0%) | Plus/Plus |
Query 1 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTYKSHLWVKASWTYRLLLCRSFP 162 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY SHLWVKASWTYRLLLCRSFP Subject 3534 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFP 3695
Range 3: 3534 to 3695 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
119.7 bits(255) | 0.0 | 52/54(96%) | 0/54(0%) | Minus/Minus |
Query 1 RKGSAQ**TIGP*CFNPEMRFVSAVVRFHLLVYLRKLASRNLRAPILDSPQTKY 162 RKGSAQ**TIGP*CFNPEMR VSAVVRFHLLVYLRKLASRNLR PILDSPQTKY Subject 3534 RKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY 3695
Range 4: 3536 to 3697 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
114.2 bits(243) | 0.0 | 52/54(96%) | 0/54(0%) | Plus/Plus |
Query 3 ILSGENRGLGRVDSLKLVCVGRQGGGNVLQHLQISSLG*SIMDLSFIIVQILSA 164 ILSGENRGLG VDSLKLVCVGRQGGGNVLQHL ISSLG*SIMDLSFIIVQILSA Subject 3536 ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSA 3697
Range 5: 3535 to 3696 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.4 bits(215) | 0.0 | 53/54(98%) | 0/54(0%) | Plus/Plus |
Query 2 YFVWGESRIGARRFLEASLXXXXXXXXXXXALTNLISGLKHHGPIVYYCADPFR 163 YFVWGESRIG RRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFR Subject 3535 YFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFR 3696
Grapevine leafroll associated virus 3 isolate 6 102 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130301.1 Length: 4711 Number of Matches: 7
Range 1: 3535 to 3696 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.1 bits(282) | 0.0 | 52/54(96%) | 0/54(0%) | Minus/Minus |
Query 2 AERICTIINDRSMML*PRDEICKCCSTFPPPCLPTQTSFKESTRPNPRFSPDKI 163 AERICTIINDRSMML*PRDEI KCCSTFPPPCLPTQTSFKEST PNPRFSPDKI Subject 3535 AERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI 3696
Range 2: 3534 to 3695 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.4 bits(274) | 0.0 | 53/54(98%) | 0/54(0%) | Plus/Plus |
Query 1 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTYKSHLWVKASWTYRLLLCRSFP 162 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY SHLWVKASWTYRLLLCRSFP Subject 3534 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFP 3695
Range 3: 3534 to 3695 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
119.7 bits(255) | 0.0 | 52/54(96%) | 0/54(0%) | Minus/Minus |
Query 1 RKGSAQ**TIGP*CFNPEMRFVSAVVRFHLLVYLRKLASRNLRAPILDSPQTKY 162 RKGSAQ**TIGP*CFNPEMR VSAVVRFHLLVYLRKLASRNLR PILDSPQTKY Subject 3534 RKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY 3695
Range 4: 3536 to 3697 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
114.2 bits(243) | 0.0 | 52/54(96%) | 0/54(0%) | Plus/Plus |
Query 3 ILSGENRGLGRVDSLKLVCVGRQGGGNVLQHLQISSLG*SIMDLSFIIVQILSA 164 ILSGENRGLG VDSLKLVCVGRQGGGNVLQHL ISSLG*SIMDLSFIIVQILSA Subject 3536 ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSA 3697
Range 5: 3535 to 3696 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.4 bits(215) | 0.0 | 53/54(98%) | 0/54(0%) | Plus/Plus |
Query 2 YFVWGESRIGARRFLEASLXXXXXXXXXXXALTNLISGLKHHGPIVYYCADPFR 163 YFVWGESRIG RRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFR Subject 3535 YFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFR 3696
Grapevine leafroll associated virus 3 isolate 6 114 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130303.1 Length: 4711 Number of Matches: 7
Range 1: 3535 to 3696 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.1 bits(282) | 0.0 | 52/54(96%) | 0/54(0%) | Minus/Minus |
Query 2 AERICTIINDRSMML*PRDEICKCCSTFPPPCLPTQTSFKESTRPNPRFSPDKI 163 AERICTIINDRSMML*PRDEI KCCSTFPPPCLPTQTSFKEST PNPRFSPDKI Subject 3535 AERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI 3696
Range 2: 3534 to 3695 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.4 bits(274) | 0.0 | 53/54(98%) | 0/54(0%) | Plus/Plus |
Query 1 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTYKSHLWVKASWTYRLLLCRSFP 162 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY SHLWVKASWTYRLLLCRSFP Subject 3534 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFP 3695
Range 3: 3534 to 3695 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
119.7 bits(255) | 0.0 | 52/54(96%) | 0/54(0%) | Minus/Minus |
Query 1 RKGSAQ**TIGP*CFNPEMRFVSAVVRFHLLVYLRKLASRNLRAPILDSPQTKY 162 RKGSAQ**TIGP*CFNPEMR VSAVVRFHLLVYLRKLASRNLR PILDSPQTKY Subject 3534 RKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY 3695
Range 4: 3536 to 3697 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
114.2 bits(243) | 0.0 | 52/54(96%) | 0/54(0%) | Plus/Plus |
Query 3 ILSGENRGLGRVDSLKLVCVGRQGGGNVLQHLQISSLG*SIMDLSFIIVQILSA 164 ILSGENRGLG VDSLKLVCVGRQGGGNVLQHL ISSLG*SIMDLSFIIVQILSA Subject 3536 ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSA 3697
Range 5: 3535 to 3696 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.4 bits(215) | 0.0 | 53/54(98%) | 0/54(0%) | Plus/Plus |
Query 2 YFVWGESRIGARRFLEASLXXXXXXXXXXXALTNLISGLKHHGPIVYYCADPFR 163 YFVWGESRIG RRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFR Subject 3535 YFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFR 3696
Nucleotide Sequence (566 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
448.3 | 2465.9 | 37% | 3.832e-124 | 100% | HQ130299.1 | |
448.3 | 2465.9 | 37% | 3.832e-124 | 100% | JX559645.1 | |
448.3 | 2465.9 | 37% | 3.832e-124 | 100% | GQ352631.1 | |
448.3 | 2465.9 | 37% | 3.832e-124 | 100% | KX756669.1 | |
446.4 | 2455.4 | 37% | 1.365e-123 | 99% | HQ130313.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 6 15 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130299.1 Length: 4711 Number of Matches: 8
Range 1: 1880 to 2443 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
448.3 bits(972) | 0.0 | 188/188(100%) | 0/188(0%) | Plus/Minus |
Query 2 ISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYGRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRFIDR*H*VWKTYLTLPPSVDQFRYVGR*SHYIQLL*WTYT 565 ISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYGRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRFIDR*H*VWKTYLTLPPSVDQFRYVGR*SHYIQLL*WTYT Subject 1880 ISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYGRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRFIDR*H*VWKTYLTLPPSVDQFRYVGR*SHYIQLL*WTYT 2443
Range 2: 1880 to 2443 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
441.9 bits(958) | 0.0 | 188/188(100%) | 0/188(0%) | Minus/Plus |
Query 2 GVGPSEQLDVVALTSDVTELINTRGQGKICFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRY 565 GVGPSEQLDVVALTSDVTELINTRGQGKICFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRY Subject 1880 GVGPSEQLDVVALTSDVTELINTRGQGKICFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRY 2443
Range 3: 1879 to 2442 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
441.4 bits(957) | 0.0 | 188/188(100%) | 0/188(0%) | Minus/Plus |
Query 3 RCRSIRAAGCSGFNVRRNGIDQH*GAR*DMFSRLSVIDQ*SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYRKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QI 566 RCRSIRAAGCSGFNVRRNGIDQH*GAR*DMFSRLSVIDQ*SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYRKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QI Subject 1879 RCRSIRAAGCSGFNVRRNGIDQH*GAR*DMFSRLSVIDQ*SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYRKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QI 2442
Range 4: 1879 to 2442 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
420.8 bits(912) | 0.0 | 188/188(100%) | 0/188(0%) | Plus/Minus |
Query 3 YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKHILPCPLVLINSVTSDVKATTSSCSDGPTP 566 YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKHILPCPLVLINSVTSDVKATTSSCSDGPTP Subject 1879 YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKHILPCPLVLINSVTSDVKATTSSCSDGPTP 2442
Range 5: 1881 to 2444 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
400.6 bits(868) | 0.0 | 188/188(100%) | 0/188(0%) | Minus/Plus |
Query 1 V*VHQSSWM*WL*RPT*RN*STLGGKVRYVFQTQCYRSMKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLP*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GIXXXXXXXXX*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDI 564 V*VHQSSWM*WL*RPT*RN*STLGGKVRYVFQTQCYRSMKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLP*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDI Subject 1881 V*VHQSSWM*WL*RPT*RN*STLGGKVRYVFQTQCYRSMKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLP*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDI 2444
Range 6: 1881 to 2129 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.4 bits(418) | 0.0 | 83/83(100%) | 0/83(0%) | Plus/Minus |
Query 316 WPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH*SITLSLENISYLAP*C*SIPLRRTLKPLHPAALMDLH 564 WPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH*SITLSLENISYLAP*C*SIPLRRTLKPLHPAALMDLH Subject 1881 WPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH*SITLSLENISYLAP*C*SIPLRRTLKPLHPAALMDLH 2129
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 8
Range 1: 15611 to 16174 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
448.3 bits(972) | 0.0 | 188/188(100%) | 0/188(0%) | Plus/Minus |
Query 2 ISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYGRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRFIDR*H*VWKTYLTLPPSVDQFRYVGR*SHYIQLL*WTYT 565 ISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYGRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRFIDR*H*VWKTYLTLPPSVDQFRYVGR*SHYIQLL*WTYT Subject 15611 ISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYGRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRFIDR*H*VWKTYLTLPPSVDQFRYVGR*SHYIQLL*WTYT 16174
Range 2: 15611 to 16174 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
441.9 bits(958) | 0.0 | 188/188(100%) | 0/188(0%) | Minus/Plus |
Query 2 GVGPSEQLDVVALTSDVTELINTRGQGKICFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRY 565 GVGPSEQLDVVALTSDVTELINTRGQGKICFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRY Subject 15611 GVGPSEQLDVVALTSDVTELINTRGQGKICFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRY 16174
Range 3: 15610 to 16173 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
441.4 bits(957) | 0.0 | 188/188(100%) | 0/188(0%) | Minus/Plus |
Query 3 RCRSIRAAGCSGFNVRRNGIDQH*GAR*DMFSRLSVIDQ*SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYRKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QI 566 RCRSIRAAGCSGFNVRRNGIDQH*GAR*DMFSRLSVIDQ*SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYRKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QI Subject 15610 RCRSIRAAGCSGFNVRRNGIDQH*GAR*DMFSRLSVIDQ*SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYRKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QI 16173
Range 4: 15610 to 16173 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
420.8 bits(912) | 0.0 | 188/188(100%) | 0/188(0%) | Plus/Minus |
Query 3 YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKHILPCPLVLINSVTSDVKATTSSCSDGPTP 566 YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKHILPCPLVLINSVTSDVKATTSSCSDGPTP Subject 15610 YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKHILPCPLVLINSVTSDVKATTSSCSDGPTP 16173
Range 5: 15612 to 16175 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
400.6 bits(868) | 0.0 | 188/188(100%) | 0/188(0%) | Minus/Plus |
Query 1 V*VHQSSWM*WL*RPT*RN*STLGGKVRYVFQTQCYRSMKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLP*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GIXXXXXXXXX*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDI 564 V*VHQSSWM*WL*RPT*RN*STLGGKVRYVFQTQCYRSMKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLP*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDI Subject 15612 V*VHQSSWM*WL*RPT*RN*STLGGKVRYVFQTQCYRSMKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLP*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDI 16175
Range 6: 15612 to 15860 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.4 bits(418) | 0.0 | 83/83(100%) | 0/83(0%) | Plus/Minus |
Query 316 WPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH*SITLSLENISYLAP*C*SIPLRRTLKPLHPAALMDLH 564 WPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH*SITLSLENISYLAP*C*SIPLRRTLKPLHPAALMDLH Subject 15612 WPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH*SITLSLENISYLAP*C*SIPLRRTLKPLHPAALMDLH 15860
Grapevine leafroll associated virus 3 isolate 621, complete genome
Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 8
Range 1: 15611 to 16174 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
448.3 bits(972) | 0.0 | 188/188(100%) | 0/188(0%) | Plus/Minus |
Query 2 ISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYGRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRFIDR*H*VWKTYLTLPPSVDQFRYVGR*SHYIQLL*WTYT 565 ISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYGRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRFIDR*H*VWKTYLTLPPSVDQFRYVGR*SHYIQLL*WTYT Subject 15611 ISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYGRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRFIDR*H*VWKTYLTLPPSVDQFRYVGR*SHYIQLL*WTYT 16174
Range 2: 15611 to 16174 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
441.9 bits(958) | 0.0 | 188/188(100%) | 0/188(0%) | Minus/Plus |
Query 2 GVGPSEQLDVVALTSDVTELINTRGQGKICFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRY 565 GVGPSEQLDVVALTSDVTELINTRGQGKICFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRY Subject 15611 GVGPSEQLDVVALTSDVTELINTRGQGKICFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRY 16174
Range 3: 15610 to 16173 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
441.4 bits(957) | 0.0 | 188/188(100%) | 0/188(0%) | Minus/Plus |
Query 3 RCRSIRAAGCSGFNVRRNGIDQH*GAR*DMFSRLSVIDQ*SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYRKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QI 566 RCRSIRAAGCSGFNVRRNGIDQH*GAR*DMFSRLSVIDQ*SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYRKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QI Subject 15610 RCRSIRAAGCSGFNVRRNGIDQH*GAR*DMFSRLSVIDQ*SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYRKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QI 16173
Range 4: 15610 to 16173 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
420.8 bits(912) | 0.0 | 188/188(100%) | 0/188(0%) | Plus/Minus |
Query 3 YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKHILPCPLVLINSVTSDVKATTSSCSDGPTP 566 YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKHILPCPLVLINSVTSDVKATTSSCSDGPTP Subject 15610 YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKHILPCPLVLINSVTSDVKATTSSCSDGPTP 16173
Range 5: 15612 to 16175 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
400.6 bits(868) | 0.0 | 188/188(100%) | 0/188(0%) | Minus/Plus |
Query 1 V*VHQSSWM*WL*RPT*RN*STLGGKVRYVFQTQCYRSMKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLP*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GIXXXXXXXXX*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDI 564 V*VHQSSWM*WL*RPT*RN*STLGGKVRYVFQTQCYRSMKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLP*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDI Subject 15612 V*VHQSSWM*WL*RPT*RN*STLGGKVRYVFQTQCYRSMKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLP*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDI 16175
Range 6: 15612 to 15860 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.4 bits(418) | 0.0 | 83/83(100%) | 0/83(0%) | Plus/Minus |
Query 316 WPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH*SITLSLENISYLAP*C*SIPLRRTLKPLHPAALMDLH 564 WPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH*SITLSLENISYLAP*C*SIPLRRTLKPLHPAALMDLH Subject 15612 WPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH*SITLSLENISYLAP*C*SIPLRRTLKPLHPAALMDLH 15860
Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome
Sequence ID: KX756669.1 Length: 18313 Number of Matches: 8
Range 1: 15426 to 15989 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
448.3 bits(972) | 0.0 | 188/188(100%) | 0/188(0%) | Plus/Minus |
Query 2 ISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYGRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRFIDR*H*VWKTYLTLPPSVDQFRYVGR*SHYIQLL*WTYT 565 ISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYGRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRFIDR*H*VWKTYLTLPPSVDQFRYVGR*SHYIQLL*WTYT Subject 15426 ISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYGRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRFIDR*H*VWKTYLTLPPSVDQFRYVGR*SHYIQLL*WTYT 15989
Range 2: 15426 to 15989 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
441.9 bits(958) | 0.0 | 188/188(100%) | 0/188(0%) | Minus/Plus |
Query 2 GVGPSEQLDVVALTSDVTELINTRGQGKICFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRY 565 GVGPSEQLDVVALTSDVTELINTRGQGKICFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRY Subject 15426 GVGPSEQLDVVALTSDVTELINTRGQGKICFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRY 15989
Range 3: 15425 to 15988 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
441.4 bits(957) | 0.0 | 188/188(100%) | 0/188(0%) | Minus/Plus |
Query 3 RCRSIRAAGCSGFNVRRNGIDQH*GAR*DMFSRLSVIDQ*SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYRKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QI 566 RCRSIRAAGCSGFNVRRNGIDQH*GAR*DMFSRLSVIDQ*SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYRKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QI Subject 15425 RCRSIRAAGCSGFNVRRNGIDQH*GAR*DMFSRLSVIDQ*SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYRKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QI 15988
Range 4: 15425 to 15988 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
420.8 bits(912) | 0.0 | 188/188(100%) | 0/188(0%) | Plus/Minus |
Query 3 YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKHILPCPLVLINSVTSDVKATTSSCSDGPTP 566 YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKHILPCPLVLINSVTSDVKATTSSCSDGPTP Subject 15425 YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKHILPCPLVLINSVTSDVKATTSSCSDGPTP 15988
Range 5: 15427 to 15990 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
400.6 bits(868) | 0.0 | 188/188(100%) | 0/188(0%) | Minus/Plus |
Query 1 V*VHQSSWM*WL*RPT*RN*STLGGKVRYVFQTQCYRSMKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLP*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GIXXXXXXXXX*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDI 564 V*VHQSSWM*WL*RPT*RN*STLGGKVRYVFQTQCYRSMKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLP*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDI Subject 15427 V*VHQSSWM*WL*RPT*RN*STLGGKVRYVFQTQCYRSMKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLP*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDI 15990
Range 6: 15427 to 15675 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.4 bits(418) | 0.0 | 83/83(100%) | 0/83(0%) | Plus/Minus |
Query 316 WPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH*SITLSLENISYLAP*C*SIPLRRTLKPLHPAALMDLH 564 WPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH*SITLSLENISYLAP*C*SIPLRRTLKPLHPAALMDLH Subject 15427 WPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH*SITLSLENISYLAP*C*SIPLRRTLKPLHPAALMDLH 15675
Grapevine leafroll associated virus 3 isolate 8 1 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130313.1 Length: 4711 Number of Matches: 8
Range 1: 1880 to 2443 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
446.4 bits(968) | 0.0 | 187/188(99%) | 0/188(0%) | Plus/Minus |
Query 2 ISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYGRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRFIDR*H*VWKTYLTLPPSVDQFRYVGR*SHYIQLL*WTYT 565 ISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYGRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL* FRYRQIPLIVDIRFIDR*H*VWKTYLTLPPSVDQFRYVGR*SHYIQLL*WTYT Subject 1880 ISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYGRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*GFRYRQIPLIVDIRFIDR*H*VWKTYLTLPPSVDQFRYVGR*SHYIQLL*WTYT 2443
Range 2: 1880 to 2443 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
441.9 bits(958) | 0.0 | 188/188(100%) | 0/188(0%) | Minus/Plus |
Query 2 GVGPSEQLDVVALTSDVTELINTRGQGKICFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRY 565 GVGPSEQLDVVALTSDVTELINTRGQGKICFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRY Subject 1880 GVGPSEQLDVVALTSDVTELINTRGQGKICFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRY 2443
Range 3: 1879 to 2442 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
439.1 bits(952) | 0.0 | 187/188(99%) | 0/188(0%) | Minus/Plus |
Query 3 RCRSIRAAGCSGFNVRRNGIDQH*GAR*DMFSRLSVIDQ*SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYRKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QI 566 RCRSIRAAGCSGFNVRRNGIDQH*GAR*DMFSRLSVIDQ*SGYLR*AVFADNGS TDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYRKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QI Subject 1879 RCRSIRAAGCSGFNVRRNGIDQH*GAR*DMFSRLSVIDQ*SGYLR*AVFADNGSPTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYRKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QI 2442
Range 4: 1879 to 2442 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
420.8 bits(912) | 0.0 | 188/188(100%) | 0/188(0%) | Plus/Minus |
Query 3 YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKHILPCPLVLINSVTSDVKATTSSCSDGPTP 566 YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKHILPCPLVLINSVTSDVKATTSSCSDGPTP Subject 1879 YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISRVMVV*VKYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKHILPCPLVLINSVTSDVKATTSSCSDGPTP 2442
Range 5: 1881 to 2444 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
397.4 bits(861) | 0.0 | 187/188(99%) | 0/188(0%) | Minus/Plus |
Query 1 V*VHQSSWM*WL*RPT*RN*STLGGKVRYVFQTQCYRSMKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLP*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GIXXXXXXXXX*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDI 564 V*VHQSSWM*WL*RPT*RN*STLGGKVRYVFQTQCYRSMKRISTMSGICR*RK YR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLP*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDI Subject 1881 V*VHQSSWM*WL*RPT*RN*STLGGKVRYVFQTQCYRSMKRISTMSGICR*RKPYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLP*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDI 2444
Range 6: 1881 to 2129 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
191.2 bits(411) | 0.0 | 82/83(99%) | 0/83(0%) | Plus/Minus |
Query 316 WPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH*SITLSLENISYLAP*C*SIPLRRTLKPLHPAALMDLH 564 WPLSYSPYLVVFDSRLSKERVCVVLRLSV LPLSANTAHRRYPLH*SITLSLENISYLAP*C*SIPLRRTLKPLHPAALMDLH Subject 1881 WPLSYSPYLVVFDSRLSKERVCVVLRLSVGLPLSANTAHRRYPLH*SITLSLENISYLAP*C*SIPLRRTLKPLHPAALMDLH 2129
Nucleotide Sequence (498 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
351.6 | 2012.6 | 28% | 4.104e-95 | 95% | KM058745.1 | |
292.0 | 701.5 | 31% | 3.505e-77 | 34% | HQ130283.1 | |
292.0 | 701.5 | 31% | 3.505e-77 | 34% | HQ130284.1 | |
292.0 | 696.5 | 31% | 3.505e-77 | 33% | HQ130285.1 | |
292.0 | 701.5 | 31% | 3.505e-77 | 34% | HQ130286.1 |
Alignments
Grapevine leafroll associated virus 3 isolate GH24, complete genome
Sequence ID: KM058745.1 Length: 18493 Number of Matches: 7
Range 1: 15788 to 16234 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
351.6 bits(761) | 0.0 | 148/149(99%) | 0/149(0%) | Minus/Minus |
Query 11 GRFDGLGTRH*IGLQYIRWVIPII*QSEIEAVRSKSFRHSVLR*GRVGWLDSFLY**CDRRMSIVSHVGTHYIRRCTIVLSSQYRLSNLRIA*IYRFTAEDCFHFVTILYVYVLHRRI*HEKLNHRDYHIPHVLGRNRSPFR*HQPTQP 457 GRFDG GTRH*IGLQYIRWVIPII*QSEIEAVRSKSFRHSVLR*GRVGWLDSFLY**CDRRMSIVSHVGTHYIRRCTIVLSSQYRLSNLRIA*IYRFTAEDCFHFVTILYVYVLHRRI*HEKLNHRDYHIPHVLGRNRSPFR*HQPTQP Subject 15788 GRFDGHGTRH*IGLQYIRWVIPII*QSEIEAVRSKSFRHSVLR*GRVGWLDSFLY**CDRRMSIVSHVGTHYIRRCTIVLSSQYRLSNLRIA*IYRFTAEDCFHFVTILYVYVLHRRI*HEKLNHRDYHIPHVLGRNRSPFR*HQPTQP 16234
Range 2: 15789 to 16235 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
341.5 bits(739) | 0.0 | 148/149(99%) | 0/149(0%) | Plus/Plus |
Query 12 GCVGWCYRKGDRLRPKTWGI**SL*FNFSCYILR*RT*T*RMVTKWKQSSAVNLYI*AILRLERRYWEESTMVHRRM*CVPT*DTILIRRSHY**RNESNQPTRP*RSTECLKDLLLTASISLC*IIGITQRIY*RPIQWRVPRPSKRP 458 GCVGWCYRKGDRLRPKTWGI**SL*FNFSCYILR*RT*T*RMVTKWKQSSAVNLYI*AILRLERRYWEESTMVHRRM*CVPT*DTILIRRSHY**RNESNQPTRP*RSTECLKDLLLTASISLC*IIGITQRIY*RPIQWRVP PSKRP Subject 15789 GCVGWCYRKGDRLRPKTWGI**SL*FNFSCYILR*RT*T*RMVTKWKQSSAVNLYI*AILRLERRYWEESTMVHRRM*CVPT*DTILIRRSHY**RNESNQPTRP*RSTECLKDLLLTASISLC*IIGITQRIY*RPIQWRVPWPSKRP 16235
Range 3: 15786 to 16235 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
337.4 bits(730) | 0.0 | 149/150(99%) | 0/150(0%) | Minus/Minus |
Query 9 WPLRWPRHTPLNWPSVYPLGNTYYLTKRNRSSKE*IF*ALRASLRPCRLVGFXXXXXXXSPYEYSISCRNALHSTMYHRTFLPISPL*PQNSLDIQVYRRGLFPLCNHPLRLCSSP*NIARKVES*RLSYSPCLGA*SIPLSITPTYATS 458 WPL WPRHTPLNWPSVYPLGNTYYLTKRNRSSKE*IF*ALRASLRPCRLVGFVSLLVV*SPYEYSISCRNALHSTMYHRTFLPISPL*PQNSLDIQVYRRGLFPLCNHPLRLCSSP*NIARKVES*RLSYSPCLGA*SIPLSITPTYATS Subject 15786 WPL*WPRHTPLNWPSVYPLGNTYYLTKRNRSSKE*IF*ALRASLRPCRLVGFVSLLVV*SPYEYSISCRNALHSTMYHRTFLPISPL*PQNSLDIQVYRRGLFPLCNHPLRLCSSP*NIARKVES*RLSYSPCLGA*SIPLSITPTYATS 16235
Range 4: 15788 to 16207 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
332.4 bits(719) | 0.0 | 140/140(100%) | 0/140(0%) | Plus/Plus |
Query 11 RLRRLVLSKGGSITPQDMGNMIVSMIQLFVLYSTVKNIDVKDGYKVETILGGKPVYLSYSEVREAILGGKYDGTSSNVVRSYMRYYTHTAITLLVEKRIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADILKANSM 430 RLRRLVLSKGGSITPQDMGNMIVSMIQLFVLYSTVKNIDVKDGYKVETILGGKPVYLSYSEVREAILGGKYDGTSSNVVRSYMRYYTHTAITLLVEKRIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADILKANSM Subject 15788 RLRRLVLSKGGSITPQDMGNMIVSMIQLFVLYSTVKNIDVKDGYKVETILGGKPVYLSYSEVREAILGGKYDGTSSNVVRSYMRYYTHTAITLLVEKRIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADILKANSM 16207
Range 5: 15784 to 16206 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
315.9 bits(683) | 0.0 | 140/141(99%) | 0/141(0%) | Minus/Minus |
Query 7 IELAFSISAG*YLLSNKAKSKQ*GVNLLGTPCFAKAV*AGWIRFSTSSVIAV*V*YLM*ERTTFDDVPSYFPPNIASLTSE*LRYTGLPPRIVSTL*PSFTSMFFTVEYSTKS*IIETIIFPMSWGVIDPPFDNTNLRNLI 429 IELAFSISAG*YLLSNKAKSKQ*GVNLLGTPCFAKAV*AGWIRFSTSSVIAV*V*YLM*ERTTFDDVPSYFPPNIASLTSE*LRYTGLPPRIVSTL*PSFTSMFFTVEYSTKS*IIETIIFPMSWGVIDPPFDNTNLRNL+ Subject 15784 IELAFSISAG*YLLSNKAKSKQ*GVNLLGTPCFAKAV*AGWIRFSTSSVIAV*V*YLM*ERTTFDDVPSYFPPNIASLTSE*LRYTGLPPRIVSTL*PSFTSMFFTVEYSTKS*IIETIIFPMSWGVIDPPFDNTNLRNLV 16206
Range 6: 15784 to 16137 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
282.4 bits(610) | 0.0 | 117/118(99%) | 0/118(0%) | Plus/Plus |
Query 7 YEVA*VGVIERGIDYAPRHGEYDSLYDSTFRAIFYGEEHRRKGWLQSGNNPRR*TCISKLF*G*RGDIGRKVRWYIVECSAFLHEILYSYGDHTTSRETNPTSLHGLSEARSA*KIYS 360 +EVA*VGVIERGIDYAPRHGEYDSLYDSTFRAIFYGEEHRRKGWLQSGNNPRR*TCISKLF*G*RGDIGRKVRWYIVECSAFLHEILYSYGDHTTSRETNPTSLHGLSEARSA*KIYS Subject 15784 HEVA*VGVIERGIDYAPRHGEYDSLYDSTFRAIFYGEEHRRKGWLQSGNNPRR*TCISKLF*G*RGDIGRKVRWYIVECSAFLHEILYSYGDHTTSRETNPTSLHGLSEARSA*KIYS 16137
Grapevine leafroll associated virus 3 isolate 3 3 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130283.1 Length: 4711 Number of Matches: 6
Range 1: 2057 to 2476 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
292.0 bits(631) | 0.0 | 120/140(86%) | 0/140(0%) | Plus/Plus |
Query 11 RLRRLVLSKGGSITPQDMGNMIVSMIQLFVLYSTVKNIDVKDGYKVETILGGKPVYLSYSEVREAILGGKYDGTSSNVVRSYMRYYTHTAITLLVEKRIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADILKANSM 430 RLRRLVLSKGGS TP+DMGNMIV+MIQLFVLYSTVKNI VKDGY+VET LG K VYLSYSEVREAILGGKYD + +N VRS+MRY+THT ITLL+EK+IQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPAD+LKAN+M Subject 2057 RLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAM 2476
Range 2: 2056 to 2475 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
180.2 bits(387) | 0.0 | 92/140(66%) | 0/140(0%) | Minus/Minus |
Query 10 IELAFSISAG*YLLSNKAKSKQ*GVNLLGTPCFAKAV*AGWIRFSTSSVIAV*V*YLM*ERTTFDDVPSYFPPNIASLTSE*LRYTGLPPRIVSTL*PSFTSMFFTVEYSTKS*IIETIIFPMSWGVIDPPFDNTNLRNL 429 I LAF+ SAG*YLLS+ AKSKQ GVNL GTPC A+AV AG I FS SSVI V*V YL+ +RT SYFPPNIASLTSE*L+ T P VSTL PS T +FFTVE STKS I+ TI+FP+S GV PPF+ T+LR+L Subject 2056 IALAFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISSVIVV*VKYLIKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIMFPISRGV*LPPFERTSLRSL 2475
Range 3: 2231 to 2500 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
62.9 bits(131) | 0.0 | 35/90(39%) | 0/90(0%) | Minus/Minus |
Query 185 RFDGLGTRH*IGLQYIRWVIPII*QSEIEAVRSKSFRHSVLR*GRVGWLDSFLY**CDRRMSIVSHVGTHYIRRCTIVLSSQYRLSNLRI 454 RF+ H + LQ++ VI II E+EAVRS+ R +VL *G V WL+ LY * + +S + H G+H + +V S Y RI Subject 2231 RFNRYSASHCVSLQHVCRVISIIQ*CEVEAVRSEPLRDAVLS*GSVRWLNFLLYK*RNSGVSKIPHKGSHSVGWRRVVFPS*YSFPYFRI 2500
Range 4: 2105 to 2194 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.0 bits(81) | 0.0 | 13/30(43%) | 0/30(0%) | Minus/Minus |
Query 59 HFVTILYVYVLHRRI*HEKLNHRDYHIPHV 148 H + I Y+L+ R+ +EKL H YH+PH+ Subject 2105 HPIPIFDAYILYSRVEYEKLYHGHYHVPHI 2194
Range 5: 2080 to 2406 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
71.2 bits(149) | 0.0 | 37/109(34%) | 0/109(0%) | Plus/Plus |
Query 34 ERGIDYAPRHGEYDSLYDSTFRAIFYGEEHRRKGWLQSGNNPRR*TCISKLF*G*RGDIGRKVRWYIVECSAFLHEILYSYGDHTTSRETNPTSLHGLSEARSA*KIYS 360 ER R+GE+DS +D+TFR + Y +E++R+ W+ G+ R + +LF I R++R + A L+E+ YS+ + T RE N S+H S AR +++S Subject 2080 ERRESNTTRYGEHDSGHDTTFRTLLYCKEYKRQRWV*GGDRIRSKEGLLELFGSKGSYIRREIRRVSNQHCAILYEVFYSHHYYATYREENSASVHCPS*ARRPEEVHS 2406
Range 6: 2076 to 2477 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
55.1 bits(114) | 0.0 | 47/134(35%) | 0/134(0%) | Plus/Plus |
Query 30 YRKGDRLRPKTWGI**SL*FNFSCYILR*RT*T*RMVTKWKQSSAVNLYI*AILRLERRYWEESTMVHRRM*CVPT*DTILIRRSHY**RNESNQPTRP*RSTECLKDLLLTASISLC*IIGITQRIY*RPIQW 431 +RK + WG ** *+NFS L *R * +M W+ + * I + + Y E +T + C P * +L Y *R + +Q T P* ST + L TAS S II IT++ *R QW Subject 2076 FRKAGVKHHEIWGT**WP*YNFSYSTLL*RI*ASKMGIGWRPN*VKRRST*VIRK*GKLY*EGNTTRLQPTLCDPL*GILLTPLLRYL*RRKFSQRTLP*LSTASRRGSLRTASTSHYWIIDITRQTC*RLTQW 2477
Grapevine leafroll associated virus 3 isolate 3 5 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130284.1 Length: 4711 Number of Matches: 6
Range 1: 2057 to 2476 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
292.0 bits(631) | 0.0 | 120/140(86%) | 0/140(0%) | Plus/Plus |
Query 11 RLRRLVLSKGGSITPQDMGNMIVSMIQLFVLYSTVKNIDVKDGYKVETILGGKPVYLSYSEVREAILGGKYDGTSSNVVRSYMRYYTHTAITLLVEKRIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADILKANSM 430 RLRRLVLSKGGS TP+DMGNMIV+MIQLFVLYSTVKNI VKDGY+VET LG K VYLSYSEVREAILGGKYD + +N VRS+MRY+THT ITLL+EK+IQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPAD+LKAN+M Subject 2057 RLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAM 2476
Range 2: 2056 to 2475 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
180.2 bits(387) | 0.0 | 92/140(66%) | 0/140(0%) | Minus/Minus |
Query 10 IELAFSISAG*YLLSNKAKSKQ*GVNLLGTPCFAKAV*AGWIRFSTSSVIAV*V*YLM*ERTTFDDVPSYFPPNIASLTSE*LRYTGLPPRIVSTL*PSFTSMFFTVEYSTKS*IIETIIFPMSWGVIDPPFDNTNLRNL 429 I LAF+ SAG*YLLS+ AKSKQ GVNL GTPC A+AV AG I FS SSVI V*V YL+ +RT SYFPPNIASLTSE*L+ T P VSTL PS T +FFTVE STKS I+ TI+FP+S GV PPF+ T+LR+L Subject 2056 IALAFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISSVIVV*VKYLIKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIMFPISRGV*LPPFERTSLRSL 2475
Range 3: 2231 to 2500 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
62.9 bits(131) | 0.0 | 35/90(39%) | 0/90(0%) | Minus/Minus |
Query 185 RFDGLGTRH*IGLQYIRWVIPII*QSEIEAVRSKSFRHSVLR*GRVGWLDSFLY**CDRRMSIVSHVGTHYIRRCTIVLSSQYRLSNLRI 454 RF+ H + LQ++ VI II E+EAVRS+ R +VL *G V WL+ LY * + +S + H G+H + +V S Y RI Subject 2231 RFNRYSASHCVSLQHVCRVISIIQ*CEVEAVRSEPLRDAVLS*GSVRWLNFLLYK*RNSGVSKIPHKGSHSVGWRRVVFPS*YSFPYFRI 2500
Range 4: 2105 to 2194 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.0 bits(81) | 0.0 | 13/30(43%) | 0/30(0%) | Minus/Minus |
Query 59 HFVTILYVYVLHRRI*HEKLNHRDYHIPHV 148 H + I Y+L+ R+ +EKL H YH+PH+ Subject 2105 HPIPIFDAYILYSRVEYEKLYHGHYHVPHI 2194
Range 5: 2080 to 2406 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
71.2 bits(149) | 0.0 | 37/109(34%) | 0/109(0%) | Plus/Plus |
Query 34 ERGIDYAPRHGEYDSLYDSTFRAIFYGEEHRRKGWLQSGNNPRR*TCISKLF*G*RGDIGRKVRWYIVECSAFLHEILYSYGDHTTSRETNPTSLHGLSEARSA*KIYS 360 ER R+GE+DS +D+TFR + Y +E++R+ W+ G+ R + +LF I R++R + A L+E+ YS+ + T RE N S+H S AR +++S Subject 2080 ERRESNTTRYGEHDSGHDTTFRTLLYCKEYKRQRWV*GGDRIRSKEGLLELFGSKGSYIRREIRRVSNQHCAILYEVFYSHHYYATYREENSASVHCPS*ARRPEEVHS 2406
Range 6: 2076 to 2477 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
55.1 bits(114) | 0.0 | 47/134(35%) | 0/134(0%) | Plus/Plus |
Query 30 YRKGDRLRPKTWGI**SL*FNFSCYILR*RT*T*RMVTKWKQSSAVNLYI*AILRLERRYWEESTMVHRRM*CVPT*DTILIRRSHY**RNESNQPTRP*RSTECLKDLLLTASISLC*IIGITQRIY*RPIQW 431 +RK + WG ** *+NFS L *R * +M W+ + * I + + Y E +T + C P * +L Y *R + +Q T P* ST + L TAS S II IT++ *R QW Subject 2076 FRKAGVKHHEIWGT**WP*YNFSYSTLL*RI*ASKMGIGWRPN*VKRRST*VIRK*GKLY*EGNTTRLQPTLCDPL*GILLTPLLRYL*RRKFSQRTLP*LSTASRRGSLRTASTSHYWIIDITRQTC*RLTQW 2477
Grapevine leafroll associated virus 3 isolate 3 7 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130285.1 Length: 4711 Number of Matches: 6
Range 1: 2057 to 2476 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
292.0 bits(631) | 0.0 | 120/140(86%) | 0/140(0%) | Plus/Plus |
Query 11 RLRRLVLSKGGSITPQDMGNMIVSMIQLFVLYSTVKNIDVKDGYKVETILGGKPVYLSYSEVREAILGGKYDGTSSNVVRSYMRYYTHTAITLLVEKRIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADILKANSM 430 RLRRLVLSKGGS TP+DMGNMIV+MIQLFVLYSTVKNI VKDGY+VET LG K VYLSYSEVREAILGGKYD + +N VRS+MRY+THT ITLL+EK+IQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPAD+LKAN+M Subject 2057 RLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAM 2476
Range 2: 2056 to 2475 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
180.2 bits(387) | 0.0 | 92/140(66%) | 0/140(0%) | Minus/Minus |
Query 10 IELAFSISAG*YLLSNKAKSKQ*GVNLLGTPCFAKAV*AGWIRFSTSSVIAV*V*YLM*ERTTFDDVPSYFPPNIASLTSE*LRYTGLPPRIVSTL*PSFTSMFFTVEYSTKS*IIETIIFPMSWGVIDPPFDNTNLRNL 429 I LAF+ SAG*YLLS+ AKSKQ GVNL GTPC A+AV AG I FS SSVI V*V YL+ +RT SYFPPNIASLTSE*L+ T P VSTL PS T +FFTVE STKS I+ TI+FP+S GV PPF+ T+LR+L Subject 2056 IALAFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISSVIVV*VKYLIKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIMFPISRGV*LPPFERTSLRSL 2475
Range 3: 2231 to 2500 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
62.9 bits(131) | 0.0 | 35/90(39%) | 0/90(0%) | Minus/Minus |
Query 185 RFDGLGTRH*IGLQYIRWVIPII*QSEIEAVRSKSFRHSVLR*GRVGWLDSFLY**CDRRMSIVSHVGTHYIRRCTIVLSSQYRLSNLRI 454 RF+ H + LQ++ VI II E+EAVRS+ R +VL *G V WL+ LY * + +S + H G+H + +V S Y RI Subject 2231 RFNRYSASHCVSLQHVCRVISIIQ*CEVEAVRSEPLRDAVLS*GSVRWLNFLLYK*RNSGVSKIPHKGSHSVGWRRVVFPS*YSFPYFRI 2500
Range 4: 2105 to 2194 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
38.2 bits(77) | 0.0 | 12/30(40%) | 0/30(0%) | Minus/Minus |
Query 59 HFVTILYVYVLHRRI*HEKLNHRDYHIPHV 148 H + I Y+ + R+ +EKL H YH+PH+ Subject 2105 HPIPIFDAYIFYSRVEYEKLYHGHYHVPHI 2194
Range 5: 2080 to 2406 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
69.3 bits(145) | 0.0 | 36/109(33%) | 0/109(0%) | Plus/Plus |
Query 34 ERGIDYAPRHGEYDSLYDSTFRAIFYGEEHRRKGWLQSGNNPRR*TCISKLF*G*RGDIGRKVRWYIVECSAFLHEILYSYGDHTTSRETNPTSLHGLSEARSA*KIYS 360 ER R+GE+DS +D+TFR + Y ++++R+ W+ G+ R + +LF I R++R + A L+E+ YS+ + T RE N S+H S AR +++S Subject 2080 ERRESNTTRYGEHDSGHDTTFRTLLYCKKYKRQRWV*GGDRIRSKEGLLELFGSKGSYIRREIRRVSNQHCAILYEVFYSHHYYATYREENSASVHCPS*ARRPEEVHS 2406
Range 6: 2076 to 2477 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.8 bits(111) | 0.0 | 46/134(34%) | 0/134(0%) | Plus/Plus |
Query 30 YRKGDRLRPKTWGI**SL*FNFSCYILR*RT*T*RMVTKWKQSSAVNLYI*AILRLERRYWEESTMVHRRM*CVPT*DTILIRRSHY**RNESNQPTRP*RSTECLKDLLLTASISLC*IIGITQRIY*RPIQW 431 +RK + WG ** *+NFS L *+ * +M W+ + * I + + Y E +T + C P * +L Y *R + +Q T P* ST + L TAS S II IT++ *R QW Subject 2076 FRKAGVKHHEIWGT**WP*YNFSYSTLL*KI*ASKMGIGWRPN*VKRRST*VIRK*GKLY*EGNTTRLQPTLCDPL*GILLTPLLRYL*RRKFSQRTLP*LSTASRRGSLRTASTSHYWIIDITRQTC*RLTQW 2477
Grapevine leafroll associated virus 3 isolate 3 8 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130286.1 Length: 4711 Number of Matches: 6
Range 1: 2057 to 2476 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
292.0 bits(631) | 0.0 | 120/140(86%) | 0/140(0%) | Plus/Plus |
Query 11 RLRRLVLSKGGSITPQDMGNMIVSMIQLFVLYSTVKNIDVKDGYKVETILGGKPVYLSYSEVREAILGGKYDGTSSNVVRSYMRYYTHTAITLLVEKRIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADILKANSM 430 RLRRLVLSKGGS TP+DMGNMIV+MIQLFVLYSTVKNI VKDGY+VET LG K VYLSYSEVREAILGGKYD + +N VRS+MRY+THT ITLL+EK+IQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPAD+LKAN+M Subject 2057 RLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAM 2476
Range 2: 2056 to 2475 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
180.2 bits(387) | 0.0 | 92/140(66%) | 0/140(0%) | Minus/Minus |
Query 10 IELAFSISAG*YLLSNKAKSKQ*GVNLLGTPCFAKAV*AGWIRFSTSSVIAV*V*YLM*ERTTFDDVPSYFPPNIASLTSE*LRYTGLPPRIVSTL*PSFTSMFFTVEYSTKS*IIETIIFPMSWGVIDPPFDNTNLRNL 429 I LAF+ SAG*YLLS+ AKSKQ GVNL GTPC A+AV AG I FS SSVI V*V YL+ +RT SYFPPNIASLTSE*L+ T P VSTL PS T +FFTVE STKS I+ TI+FP+S GV PPF+ T+LR+L Subject 2056 IALAFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG*IFFSISSVIVV*VKYLIKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIMFPISRGV*LPPFERTSLRSL 2475
Range 3: 2231 to 2500 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
62.9 bits(131) | 0.0 | 35/90(39%) | 0/90(0%) | Minus/Minus |
Query 185 RFDGLGTRH*IGLQYIRWVIPII*QSEIEAVRSKSFRHSVLR*GRVGWLDSFLY**CDRRMSIVSHVGTHYIRRCTIVLSSQYRLSNLRI 454 RF+ H + LQ++ VI II E+EAVRS+ R +VL *G V WL+ LY * + +S + H G+H + +V S Y RI Subject 2231 RFNRYSASHCVSLQHVCRVISIIQ*CEVEAVRSEPLRDAVLS*GSVRWLNFLLYK*RNSGVSKIPHKGSHSVGWRRVVFPS*YSFPYFRI 2500
Range 4: 2105 to 2194 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.0 bits(81) | 0.0 | 13/30(43%) | 0/30(0%) | Minus/Minus |
Query 59 HFVTILYVYVLHRRI*HEKLNHRDYHIPHV 148 H + I Y+L+ R+ +EKL H YH+PH+ Subject 2105 HPIPIFDAYILYSRVEYEKLYHGHYHVPHI 2194
Range 5: 2080 to 2406 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
71.2 bits(149) | 0.0 | 37/109(34%) | 0/109(0%) | Plus/Plus |
Query 34 ERGIDYAPRHGEYDSLYDSTFRAIFYGEEHRRKGWLQSGNNPRR*TCISKLF*G*RGDIGRKVRWYIVECSAFLHEILYSYGDHTTSRETNPTSLHGLSEARSA*KIYS 360 ER R+GE+DS +D+TFR + Y +E++R+ W+ G+ R + +LF I R++R + A L+E+ YS+ + T RE N S+H S AR +++S Subject 2080 ERRESNTTRYGEHDSGHDTTFRTLLYCKEYKRQRWV*GGDRIRSKEGLLELFGSKGSYIRREIRRVSNQHCAILYEVFYSHHYYATYREENSASVHCPS*ARRPEEVHS 2406
Range 6: 2076 to 2477 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
55.1 bits(114) | 0.0 | 47/134(35%) | 0/134(0%) | Plus/Plus |
Query 30 YRKGDRLRPKTWGI**SL*FNFSCYILR*RT*T*RMVTKWKQSSAVNLYI*AILRLERRYWEESTMVHRRM*CVPT*DTILIRRSHY**RNESNQPTRP*RSTECLKDLLLTASISLC*IIGITQRIY*RPIQW 431 +RK + WG ** *+NFS L *R * +M W+ + * I + + Y E +T + C P * +L Y *R + +Q T P* ST + L TAS S II IT++ *R QW Subject 2076 FRKAGVKHHEIWGT**WP*YNFSYSTLL*RI*ASKMGIGWRPN*VKRRST*VIRK*GKLY*EGNTTRLQPTLCDPL*GILLTPLLRYL*RRKFSQRTLP*LSTASRRGSLRTASTSHYWIIDITRQTC*RLTQW 2477
Nucleotide Sequence (878 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
642.1 | 3582.6 | 34% | 0 | 77% | HQ130328.1 | |
642.1 | 3582.6 | 34% | 0 | 77% | HQ130330.1 | |
634.3 | 3557.8 | 34% | 0 | 73% | GQ865602.1 | |
631.6 | 3554.6 | 34% | 0 | 73% | HQ130303.1 | |
633.9 | 3550.0 | 34% | 0 | 77% | HQ130300.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 9 25 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130328.1 Length: 4711 Number of Matches: 11
Range 1: 646 to 1302 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
484.0 bits(1050) | 0.0 | 213/219(97%) | 0/219(0%) | Plus/Minus |
Query 3 DRVCLAGKSALCIK*ALV*LSGRTYPGGSGGASFADLKER*SCLSFSNRDS*KSTCV*APMNYQ*KVNISKFFTNL*TSIVATSFAIVGRRCVRCYRPLPSCF*TPAV*LNSMLVLRRC*TDRTSDERSLSCTERISVVLHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ 659 D++ ++GKSALCIK*AL *LSGRTYPGGSGGASFADLKER*SCLSFSNRDS*KSTCV*APMNYQ*KVNISKFFTNL*TSIVATSFAIVGRRCVRCYRPLPSCF*TPAV*LNSMLVLRRC*TDRTSDERSLSCTERISVVLHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ Subject 646 DKL*VSGKSALCIK*ALT*LSGRTYPGGSGGASFADLKER*SCLSFSNRDS*KSTCV*APMNYQ*KVNISKFFTNL*TSIVATSFAIVGRRCVRCYRPLPSCF*TPAV*LNSMLVLRRC*TDRTSDERSLSCTERISVVLHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ 1302
Range 2: 440 to 673 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
182.1 bits(391) | 0.0 | 78/78(100%) | 0/78(0%) | Plus/Minus |
Query 632 EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSINAALIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLS 865 EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSINAALIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLS Subject 440 EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSINAALIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLS 673
Range 3: 432 to 1289 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
642.1 bits(1395) | 0.0 | 279/286(98%) | 0/286(0%) | Plus/Minus |
Query 16 WRESLLFVSNKPSYNYLGERTREDQEELHSLT*KKDSLVCLSATATHESLHAYKPP*IINKR*IFLNFSPIYRHRSXXXXXXXXEDVV*GVIGRYRLVSKRLLSS*IPC*YCVVVEQIVRRTNAVYRVRKEFRWYSMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLHQCSINLHCHLY*YFPWLVNNFRFVGNSRQVQSYSLAHSLQELVCFY 873 +RESLLFVSNKPS+NYLGER REDQEELHSLT*KKDSLVCLSATATHESLH YKPP*IINKR*IFLNFSPIYRHRS*LLLLQ*LEDVV*GVIGRYRLVSKRLLSS*IPC*YCVVVEQIVRRTNAVYRVRKEFRWYSMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLHQCSINLHCHLY*YFPWLVNNFRFVGNSRQVQSYSLAHSLQELV + Subject 432 YRESLLFVSNKPSHNYLGERIREDQEELHSLT*KKDSLVCLSATATHESLHVYKPP*IINKR*IFLNFSPIYRHRS*LLLLQ*LEDVV*GVIGRYRLVSKRLLSS*IPC*YCVVVEQIVRRTNAVYRVRKEFRWYSMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLHQCSINLHCHLY*YFPWLVNNFRFVGNSRQVQSYSLAHSLQELVWIF 1289
Range 4: 441 to 1286 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
628.8 bits(1366) | 0.0 | 278/282(99%) | 0/282(0%) | Minus/Plus |
Query 19 DKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADDAATKTKFFLYVMQIACXXXXXXXXXFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQLLQKK*LRSMSINW*KI*KYLPFIDNSWGLIRM*TFMSRGC*KTNKTIFLSSQRMKLLLILPGTFAQIVIRGLI*YKEQTFP 864 DKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADDAATKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQLLQKK*LRSMSINW*KI*KYLPFIDNSWGLI M*TFMSRGC*KTNKTIFLSSQRMKLLLILP TFAQIV+ GLI*YKEQTFP Subject 441 DKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADDAATKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQLLQKK*LRSMSINW*KI*KYLPFIDNSWGLIHM*TFMSRGC*KTNKTIFLSSQRMKLLLILPDTFAQIVM*GLI*YKEQTFP 1286
Range 5: 431 to 1303 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
628.4 bits(1365) | 0.0 | 284/291(98%) | 0/291(0%) | Minus/Plus |
Query 2 DKSRQVLEDYGQGNSFGLDGSYPQTESY*RARESISRGGNED*CCIDGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWSTTEILSVHXXXXXXXXXXXXXXRNTSMEFS*TAGV*KQDGNGR*HLTQRLPTIAKEVATIDVYKLVKNLEIFTFY**FMGAYTHVDFHESRLLKDKQDYLSFKSANEAPPDPPGYVRPDSYTRAYLIQRADFPAKHTLS 874 ++SRQVLEDYGQGNSFGLDGSYPQTESY*RARESISRGGNED*CCIDGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWSTTEILSVHDRLRSSDVRSVQQRRNTSMEFS*TAGV*KQDGNGR*HLTQRLPTIAKEVATIDVYKLVKNLEIFTFY**FMGAYTHVDFHESRLLKDKQDYLSFKSANEAPPDPPGYVRPDSY RAYLIQRADFP +LS Subject 431 ERSRQVLEDYGQGNSFGLDGSYPQTESY*RARESISRGGNED*CCIDGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWSTTEILSVHDRLRSSDVRSVQQRRNTSMEFS*TAGV*KQDGNGR*HLTQRLPTIAKEVATIDVYKLVKNLEIFTFY**FMGAYTHVDFHESRLLKDKQDYLSFKSANEAPPDPPGYVRPDSYVRAYLIQRADFPDTQSLS 1303
Range 6: 713 to 1285 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
450.1 bits(976) | 0.0 | 188/191(98%) | 0/191(0%) | Plus/Minus |
Query 20 GKVCSLYQISPRITIWANVPGRIRRSFIR*LERKIVLFVFQQPRLMKVYMRISPHELSIKGKYF*IFHQFIDIDRSYFFCNSWKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP 592 GKVCSLYQISP ITIWANV GRIRRSFIR*LERKIVLFVFQQPRLMKVYM ISPHELSIKGKYF*IFHQFIDIDRSYFFCNSWKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP Subject 713 GKVCSLYQISPHITIWANVSGRIRRSFIR*LERKIVLFVFQQPRLMKVYMCISPHELSIKGKYF*IFHQFIDIDRSYFFCNSWKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP 1285
Range 7: 427 to 504 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
58.3 bits(121) | 0.0 | 24/26(92%) | 0/26(0%) | Plus/Minus |
Query 801 VCG*LPSSPKLFPCP*SSRTCLLLSQ 878 VCG*LPSSPKLFPCP*SSRTCL LS+ Subject 427 VCG*LPSSPKLFPCP*SSRTCLDLSR 504
Range 8: 559 to 594 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
32.2 bits(64) | 0.0 | 12/12(100%) | 0/12(0%) | Plus/Minus |
Query 711 P*PSYTAPSMQH 746 P*PSYTAPSMQH Subject 559 P*PSYTAPSMQH 594
Range 9: 694 to 1194 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
276.9 bits(598) | 0.0 | 166/167(99%) | 0/167(0%) | Minus/Plus |
Query 111 TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMEYHRNSXXXXXXXXXXXTICSTTTQY*HGI*LDSRRLEXXXXXXXXXXXTSSNYCKRSSYDRCL*IGEKFRNXXXXXXXXXXXYACRLS*VAVAERQTRLSFFQ 611 TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMEYHRNSFRTR*TAFVRRTICSTTTQY*HGI*LDSRRLETRR*RPITPYTTSSNYCKRSSYDRCL*IGEKFRNIYLLLIIHGGLY CRLS*VAVAERQTRLSFFQ Subject 694 TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMEYHRNSFRTR*TAFVRRTICSTTTQY*HGI*LDSRRLETRR*RPITPYTTSSNYCKRSSYDRCL*IGEKFRNIYLLLIIHGGLYTCRLS*VAVAERQTRLSFFQ 1194
Range 10: 439 to 642 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
162.4 bits(348) | 0.0 | 68/68(100%) | 0/68(0%) | Minus/Plus |
Query 663 QTSS*RLWARE*LWT*RELPTNRKLLTSQGKYQ*RWQ*RLMLH*WSCVRRLWAPMTQQLRQNSSCT*C 866 QTSS*RLWARE*LWT*RELPTNRKLLTSQGKYQ*RWQ*RLMLH*WSCVRRLWAPMTQQLRQNSSCT*C Subject 439 QTSS*RLWARE*LWT*RELPTNRKLLTSQGKYQ*RWQ*RLMLH*WSCVRRLWAPMTQQLRQNSSCT*C 642
Grapevine leafroll associated virus 3 isolate 9 1010 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130330.1 Length: 4711 Number of Matches: 11
Range 1: 646 to 1302 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
484.0 bits(1050) | 0.0 | 213/219(97%) | 0/219(0%) | Plus/Minus |
Query 3 DRVCLAGKSALCIK*ALV*LSGRTYPGGSGGASFADLKER*SCLSFSNRDS*KSTCV*APMNYQ*KVNISKFFTNL*TSIVATSFAIVGRRCVRCYRPLPSCF*TPAV*LNSMLVLRRC*TDRTSDERSLSCTERISVVLHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ 659 D++ ++GKSALCIK*AL *LSGRTYPGGSGGASFADLKER*SCLSFSNRDS*KSTCV*APMNYQ*KVNISKFFTNL*TSIVATSFAIVGRRCVRCYRPLPSCF*TPAV*LNSMLVLRRC*TDRTSDERSLSCTERISVVLHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ Subject 646 DKL*VSGKSALCIK*ALT*LSGRTYPGGSGGASFADLKER*SCLSFSNRDS*KSTCV*APMNYQ*KVNISKFFTNL*TSIVATSFAIVGRRCVRCYRPLPSCF*TPAV*LNSMLVLRRC*TDRTSDERSLSCTERISVVLHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ 1302
Range 2: 440 to 673 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
182.1 bits(391) | 0.0 | 78/78(100%) | 0/78(0%) | Plus/Minus |
Query 632 EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSINAALIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLS 865 EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSINAALIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLS Subject 440 EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSINAALIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLS 673
Range 3: 432 to 1289 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
642.1 bits(1395) | 0.0 | 279/286(98%) | 0/286(0%) | Plus/Minus |
Query 16 WRESLLFVSNKPSYNYLGERTREDQEELHSLT*KKDSLVCLSATATHESLHAYKPP*IINKR*IFLNFSPIYRHRSXXXXXXXXEDVV*GVIGRYRLVSKRLLSS*IPC*YCVVVEQIVRRTNAVYRVRKEFRWYSMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLHQCSINLHCHLY*YFPWLVNNFRFVGNSRQVQSYSLAHSLQELVCFY 873 +RESLLFVSNKPS+NYLGER REDQEELHSLT*KKDSLVCLSATATHESLH YKPP*IINKR*IFLNFSPIYRHRS*LLLLQ*LEDVV*GVIGRYRLVSKRLLSS*IPC*YCVVVEQIVRRTNAVYRVRKEFRWYSMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLHQCSINLHCHLY*YFPWLVNNFRFVGNSRQVQSYSLAHSLQELV + Subject 432 YRESLLFVSNKPSHNYLGERIREDQEELHSLT*KKDSLVCLSATATHESLHVYKPP*IINKR*IFLNFSPIYRHRS*LLLLQ*LEDVV*GVIGRYRLVSKRLLSS*IPC*YCVVVEQIVRRTNAVYRVRKEFRWYSMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLHQCSINLHCHLY*YFPWLVNNFRFVGNSRQVQSYSLAHSLQELVWIF 1289
Range 4: 441 to 1286 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
628.8 bits(1366) | 0.0 | 278/282(99%) | 0/282(0%) | Minus/Plus |
Query 19 DKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADDAATKTKFFLYVMQIACXXXXXXXXXFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQLLQKK*LRSMSINW*KI*KYLPFIDNSWGLIRM*TFMSRGC*KTNKTIFLSSQRMKLLLILPGTFAQIVIRGLI*YKEQTFP 864 DKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADDAATKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQLLQKK*LRSMSINW*KI*KYLPFIDNSWGLI M*TFMSRGC*KTNKTIFLSSQRMKLLLILP TFAQIV+ GLI*YKEQTFP Subject 441 DKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADDAATKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQLLQKK*LRSMSINW*KI*KYLPFIDNSWGLIHM*TFMSRGC*KTNKTIFLSSQRMKLLLILPDTFAQIVM*GLI*YKEQTFP 1286
Range 5: 431 to 1303 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
628.4 bits(1365) | 0.0 | 284/291(98%) | 0/291(0%) | Minus/Plus |
Query 2 DKSRQVLEDYGQGNSFGLDGSYPQTESY*RARESISRGGNED*CCIDGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWSTTEILSVHXXXXXXXXXXXXXXRNTSMEFS*TAGV*KQDGNGR*HLTQRLPTIAKEVATIDVYKLVKNLEIFTFY**FMGAYTHVDFHESRLLKDKQDYLSFKSANEAPPDPPGYVRPDSYTRAYLIQRADFPAKHTLS 874 ++SRQVLEDYGQGNSFGLDGSYPQTESY*RARESISRGGNED*CCIDGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWSTTEILSVHDRLRSSDVRSVQQRRNTSMEFS*TAGV*KQDGNGR*HLTQRLPTIAKEVATIDVYKLVKNLEIFTFY**FMGAYTHVDFHESRLLKDKQDYLSFKSANEAPPDPPGYVRPDSY RAYLIQRADFP +LS Subject 431 ERSRQVLEDYGQGNSFGLDGSYPQTESY*RARESISRGGNED*CCIDGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWSTTEILSVHDRLRSSDVRSVQQRRNTSMEFS*TAGV*KQDGNGR*HLTQRLPTIAKEVATIDVYKLVKNLEIFTFY**FMGAYTHVDFHESRLLKDKQDYLSFKSANEAPPDPPGYVRPDSYVRAYLIQRADFPDTQSLS 1303
Range 6: 713 to 1285 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
450.1 bits(976) | 0.0 | 188/191(98%) | 0/191(0%) | Plus/Minus |
Query 20 GKVCSLYQISPRITIWANVPGRIRRSFIR*LERKIVLFVFQQPRLMKVYMRISPHELSIKGKYF*IFHQFIDIDRSYFFCNSWKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP 592 GKVCSLYQISP ITIWANV GRIRRSFIR*LERKIVLFVFQQPRLMKVYM ISPHELSIKGKYF*IFHQFIDIDRSYFFCNSWKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP Subject 713 GKVCSLYQISPHITIWANVSGRIRRSFIR*LERKIVLFVFQQPRLMKVYMCISPHELSIKGKYF*IFHQFIDIDRSYFFCNSWKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP 1285
Range 7: 427 to 504 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
58.3 bits(121) | 0.0 | 24/26(92%) | 0/26(0%) | Plus/Minus |
Query 801 VCG*LPSSPKLFPCP*SSRTCLLLSQ 878 VCG*LPSSPKLFPCP*SSRTCL LS+ Subject 427 VCG*LPSSPKLFPCP*SSRTCLDLSR 504
Range 8: 559 to 594 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
32.2 bits(64) | 0.0 | 12/12(100%) | 0/12(0%) | Plus/Minus |
Query 711 P*PSYTAPSMQH 746 P*PSYTAPSMQH Subject 559 P*PSYTAPSMQH 594
Range 9: 694 to 1194 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
276.9 bits(598) | 0.0 | 166/167(99%) | 0/167(0%) | Minus/Plus |
Query 111 TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMEYHRNSXXXXXXXXXXXTICSTTTQY*HGI*LDSRRLEXXXXXXXXXXXTSSNYCKRSSYDRCL*IGEKFRNXXXXXXXXXXXYACRLS*VAVAERQTRLSFFQ 611 TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMEYHRNSFRTR*TAFVRRTICSTTTQY*HGI*LDSRRLETRR*RPITPYTTSSNYCKRSSYDRCL*IGEKFRNIYLLLIIHGGLY CRLS*VAVAERQTRLSFFQ Subject 694 TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMEYHRNSFRTR*TAFVRRTICSTTTQY*HGI*LDSRRLETRR*RPITPYTTSSNYCKRSSYDRCL*IGEKFRNIYLLLIIHGGLYTCRLS*VAVAERQTRLSFFQ 1194
Range 10: 439 to 642 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
162.4 bits(348) | 0.0 | 68/68(100%) | 0/68(0%) | Minus/Plus |
Query 663 QTSS*RLWARE*LWT*RELPTNRKLLTSQGKYQ*RWQ*RLMLH*WSCVRRLWAPMTQQLRQNSSCT*C 866 QTSS*RLWARE*LWT*RELPTNRKLLTSQGKYQ*RWQ*RLMLH*WSCVRRLWAPMTQQLRQNSSCT*C Subject 439 QTSS*RLWARE*LWT*RELPTNRKLLTSQGKYQ*RWQ*RLMLH*WSCVRRLWAPMTQQLRQNSSCT*C 642
Grapevine leafroll associated virus isolate KHCP2 coat protein gene, complete cds
Sequence ID: GQ865602.1 Length: 1428 Number of Matches: 11
Range 1: 653 to 1309 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
483.6 bits(1049) | 0.0 | 213/219(97%) | 0/219(0%) | Plus/Minus |
Query 3 DRVCLAGKSALCIK*ALV*LSGRTYPGGSGGASFADLKER*SCLSFSNRDS*KSTCV*APMNYQ*KVNISKFFTNL*TSIVATSFAIVGRRCVRCYRPLPSCF*TPAV*LNSMLVLRRC*TDRTSDERSLSCTERISVVLHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ 659 D++ + GKSALCIK*AL *LSGRTYPGGSGGASFADLKER*SCLSFSNRDS*KSTCV*APMNYQ*KVNISKFFTNL*TSIVATSFAIVGRRCVRCYRPLPSCF*TPAV*LNSMLVLRRC*TDRTSDERSLSCTERISVVLHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ Subject 653 DKLRVLGKSALCIK*ALT*LSGRTYPGGSGGASFADLKER*SCLSFSNRDS*KSTCV*APMNYQ*KVNISKFFTNL*TSIVATSFAIVGRRCVRCYRPLPSCF*TPAV*LNSMLVLRRC*TDRTSDERSLSCTERISVVLHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ 1309
Range 2: 447 to 680 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
182.1 bits(391) | 0.0 | 78/78(100%) | 0/78(0%) | Plus/Minus |
Query 632 EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSINAALIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLS 865 EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSINAALIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLS Subject 447 EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSINAALIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLS 680
Range 3: 439 to 1290 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
634.3 bits(1378) | 0.0 | 276/284(97%) | 0/284(0%) | Plus/Minus |
Query 22 ESLLFVSNKPSYNYLGERTREDQEELHSLT*KKDSLVCLSATATHESLHAYKPP*IINKR*IFLNFSPIYRHRSXXXXXXXXEDVV*GVIGRYRLVSKRLLSS*IPC*YCVVVEQIVRRTNAVYRVRKEFRWYSMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLHQCSINLHCHLY*YFPWLVNNFRFVGNSRQVQSYSLAHSLQELVCFY 873 ESLLFVSNKPS+NYLGER REDQEELHSLT*KKDSLVCLSATATHESLH YKPP*IINKR*IFLNFSPIYRHRS*LLLLQ*LEDVV*GVI RYRLVSKRLLSS*IPC*YCVVVEQIVRRTNAVYRVRKEFRWYSMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLHQC INLHCHLY*YFPWLVNNFRFVGNSRQVQSYSLAHSLQELV + Subject 439 ESLLFVSNKPSHNYLGERIREDQEELHSLT*KKDSLVCLSATATHESLHVYKPP*IINKR*IFLNFSPIYRHRS*LLLLQ*LEDVV*GVIARYRLVSKRLLSS*IPC*YCVVVEQIVRRTNAVYRVRKEFRWYSMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLHQCGINLHCHLY*YFPWLVNNFRFVGNSRQVQSYSLAHSLQELVWIF 1290
Range 4: 448 to 1293 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
627.0 bits(1362) | 0.0 | 277/282(98%) | 0/282(0%) | Minus/Plus |
Query 19 DKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADDAATKTKFFLYVMQIACXXXXXXXXXFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQLLQKK*LRSMSINW*KI*KYLPFIDNSWGLIRM*TFMSRGC*KTNKTIFLSSQRMKLLLILPGTFAQIVIRGLI*YKEQTFP 864 DKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADDAATKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVT DNTLHNVFQLLQKK*LRSMSINW*KI*KYLPFIDNSWGLI M*TFMSRGC*KTNKTIFLSSQRMKLLLILP TFAQIV+ GLI*YKEQTFP Subject 448 DKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADDAATKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTGDNTLHNVFQLLQKK*LRSMSINW*KI*KYLPFIDNSWGLIHM*TFMSRGC*KTNKTIFLSSQRMKLLLILPDTFAQIVM*GLI*YKEQTFP 1293
Range 5: 438 to 1310 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
622.9 bits(1353) | 0.0 | 283/291(97%) | 0/291(0%) | Minus/Plus |
Query 2 DKSRQVLEDYGQGNSFGLDGSYPQTESY*RARESISRGGNED*CCIDGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWSTTEILSVHXXXXXXXXXXXXXXRNTSMEFS*TAGV*KQDGNGR*HLTQRLPTIAKEVATIDVYKLVKNLEIFTFY**FMGAYTHVDFHESRLLKDKQDYLSFKSANEAPPDPPGYVRPDSYTRAYLIQRADFPAKHTLS 874 ++SRQVLEDYGQGNSFGLDGSYPQTESY*RARESISRGGNED*C IDGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWSTTEILSVHDRLRSSDVRSVQQRRNTSMEFS*TAGV*KQDGNGR*HLTQRLPTIAKEVATIDVYKLVKNLEIFTFY**FMGAYTHVDFHESRLLKDKQDYLSFKSANEAPPDPPGYVRPDSY RAYLIQRADFP +LS Subject 438 ERSRQVLEDYGQGNSFGLDGSYPQTESY*RARESISRGGNED*CRIDGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWSTTEILSVHDRLRSSDVRSVQQRRNTSMEFS*TAGV*KQDGNGR*HLTQRLPTIAKEVATIDVYKLVKNLEIFTFY**FMGAYTHVDFHESRLLKDKQDYLSFKSANEAPPDPPGYVRPDSYVRAYLIQRADFPNTRSLS 1310
Range 6: 720 to 1292 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
447.8 bits(971) | 0.0 | 187/191(98%) | 0/191(0%) | Plus/Minus |
Query 20 GKVCSLYQISPRITIWANVPGRIRRSFIR*LERKIVLFVFQQPRLMKVYMRISPHELSIKGKYF*IFHQFIDIDRSYFFCNSWKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP 592 GKVCSLYQISP ITIWANV GRIRRSFIR*LERKIVLFVFQQPRLMKVYM ISPHELSIKGKYF*IFHQFIDIDRSYFFCNSWKTLCKVLS VTVLFLNACCLAKFHASIASLLNRSYVGRTQSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP Subject 720 GKVCSLYQISPHITIWANVSGRIRRSFIR*LERKIVLFVFQQPRLMKVYMCISPHELSIKGKYF*IFHQFIDIDRSYFFCNSWKTLCKVLSPVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP 1292
Range 7: 434 to 511 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
58.3 bits(121) | 0.0 | 24/26(92%) | 0/26(0%) | Plus/Minus |
Query 801 VCG*LPSSPKLFPCP*SSRTCLLLSQ 878 VCG*LPSSPKLFPCP*SSRTCL LS+ Subject 434 VCG*LPSSPKLFPCP*SSRTCLDLSR 511
Range 8: 566 to 601 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
30.4 bits(60) | 0.0 | 11/12(92%) | 0/12(0%) | Plus/Minus |
Query 711 P*PSYTAPSMQH 746 P*PSYTAPSM+H Subject 566 P*PSYTAPSMRH 601
Range 9: 701 to 1201 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
276.9 bits(598) | 0.0 | 165/167(99%) | 0/167(0%) | Minus/Plus |
Query 111 TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMEYHRNSXXXXXXXXXXXTICSTTTQY*HGI*LDSRRLEXXXXXXXXXXXTSSNYCKRSSYDRCL*IGEKFRNXXXXXXXXXXXYACRLS*VAVAERQTRLSFFQ 611 TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMEYHRNSFRTR*TAFVRRTICSTTTQY*HGI*LDSRRLETRR*R ITPYTTSSNYCKRSSYDRCL*IGEKFRNIYLLLIIHGGLY CRLS*VAVAERQTRLSFFQ Subject 701 TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMEYHRNSFRTR*TAFVRRTICSTTTQY*HGI*LDSRRLETRR*RAITPYTTSSNYCKRSSYDRCL*IGEKFRNIYLLLIIHGGLYTCRLS*VAVAERQTRLSFFQ 1201
Range 10: 446 to 649 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
159.1 bits(341) | 0.0 | 67/68(99%) | 0/68(0%) | Minus/Plus |
Query 663 QTSS*RLWARE*LWT*RELPTNRKLLTSQGKYQ*RWQ*RLMLH*WSCVRRLWAPMTQQLRQNSSCT*C 866 QTSS*RLWARE*LWT*RELPTNRKLLTSQGKYQ*RWQ*RLM H*WSCVRRLWAPMTQQLRQNSSCT*C Subject 446 QTSS*RLWARE*LWT*RELPTNRKLLTSQGKYQ*RWQ*RLMPH*WSCVRRLWAPMTQQLRQNSSCT*C 649
Grapevine leafroll associated virus 3 isolate 6 114 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130303.1 Length: 4711 Number of Matches: 11
Range 1: 646 to 1302 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
483.1 bits(1048) | 0.0 | 213/219(97%) | 0/219(0%) | Plus/Minus |
Query 3 DRVCLAGKSALCIK*ALV*LSGRTYPGGSGGASFADLKER*SCLSFSNRDS*KSTCV*APMNYQ*KVNISKFFTNL*TSIVATSFAIVGRRCVRCYRPLPSCF*TPAV*LNSMLVLRRC*TDRTSDERSLSCTERISVVLHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ 659 D++ + GKSALCIK*AL *LSGRTYPGGSGGASFADLKER*SCLSFSNRDS*KSTCV*APMNYQ*KVNISKFFTNL*TSIVATSFAIVGRRCVRCYRPLPSCF*TPAV*LNSMLVLRRC*TDRTSDERSLSCTERISVVLHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ Subject 646 DKL*VLGKSALCIK*ALT*LSGRTYPGGSGGASFADLKER*SCLSFSNRDS*KSTCV*APMNYQ*KVNISKFFTNL*TSIVATSFAIVGRRCVRCYRPLPSCF*TPAV*LNSMLVLRRC*TDRTSDERSLSCTERISVVLHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ 1302
Range 2: 440 to 673 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
182.1 bits(391) | 0.0 | 78/78(100%) | 0/78(0%) | Plus/Minus |
Query 632 EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSINAALIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLS 865 EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSINAALIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLS Subject 440 EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSINAALIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLS 673
Range 3: 432 to 1283 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
631.6 bits(1372) | 0.0 | 276/284(97%) | 0/284(0%) | Plus/Minus |
Query 22 ESLLFVSNKPSYNYLGERTREDQEELHSLT*KKDSLVCLSATATHESLHAYKPP*IINKR*IFLNFSPIYRHRSXXXXXXXXEDVV*GVIGRYRLVSKRLLSS*IPC*YCVVVEQIVRRTNAVYRVRKEFRWYSMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLHQCSINLHCHLY*YFPWLVNNFRFVGNSRQVQSYSLAHSLQELVCFY 873 ESLLFVSNKPS+NYLGER REDQEELHSLT*KKDSLVCLSATATHESLH YKPP*IINKR*IFLNFSPIYRHRS*LLLLQ*LEDVV*GVIGRYRLVSKRLLSS*IPC*YCVVVEQIVRRTNAVYRVRKEFRWYSMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLHQC INLH HLY*YFPWLVNNFRFVGNSRQVQSYSLAHSLQELV + Subject 432 ESLLFVSNKPSHNYLGERIREDQEELHSLT*KKDSLVCLSATATHESLHVYKPP*IINKR*IFLNFSPIYRHRS*LLLLQ*LEDVV*GVIGRYRLVSKRLLSS*IPC*YCVVVEQIVRRTNAVYRVRKEFRWYSMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLHQCGINLHRHLY*YFPWLVNNFRFVGNSRQVQSYSLAHSLQELVWIF 1283
Range 4: 441 to 1286 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
628.8 bits(1366) | 0.0 | 278/282(99%) | 0/282(0%) | Minus/Plus |
Query 19 DKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADDAATKTKFFLYVMQIACXXXXXXXXXFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQLLQKK*LRSMSINW*KI*KYLPFIDNSWGLIRM*TFMSRGC*KTNKTIFLSSQRMKLLLILPGTFAQIVIRGLI*YKEQTFP 864 DKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADDAATKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQLLQKK*LRSMSINW*KI*KYLPFIDNSWGLI M*TFMSRGC*KTNKTIFLSSQRMKLLLILP TFAQIV+ GLI*YKEQTFP Subject 441 DKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADDAATKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQLLQKK*LRSMSINW*KI*KYLPFIDNSWGLIHM*TFMSRGC*KTNKTIFLSSQRMKLLLILPDTFAQIVM*GLI*YKEQTFP 1286
Range 5: 431 to 1303 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
620.6 bits(1348) | 0.0 | 282/291(97%) | 0/291(0%) | Minus/Plus |
Query 2 DKSRQVLEDYGQGNSFGLDGSYPQTESY*RARESISRGGNED*CCIDGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWSTTEILSVHXXXXXXXXXXXXXXRNTSMEFS*TAGV*KQDGNGR*HLTQRLPTIAKEVATIDVYKLVKNLEIFTFY**FMGAYTHVDFHESRLLKDKQDYLSFKSANEAPPDPPGYVRPDSYTRAYLIQRADFPAKHTLS 874 ++SRQVLEDYGQGNSFGLDGSYPQTESY*RARESISRGG+ED*C IDGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWSTTEILSVHDRLRSSDVRSVQQRRNTSMEFS*TAGV*KQDGNGR*HLTQRLPTIAKEVATIDVYKLVKNLEIFTFY**FMGAYTHVDFHESRLLKDKQDYLSFKSANEAPPDPPGYVRPDSY RAYLIQRADFP +LS Subject 431 ERSRQVLEDYGQGNSFGLDGSYPQTESY*RARESISRGGDED*CRIDGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWSTTEILSVHDRLRSSDVRSVQQRRNTSMEFS*TAGV*KQDGNGR*HLTQRLPTIAKEVATIDVYKLVKNLEIFTFY**FMGAYTHVDFHESRLLKDKQDYLSFKSANEAPPDPPGYVRPDSYVRAYLIQRADFPNTQSLS 1303
Range 6: 713 to 1285 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
450.1 bits(976) | 0.0 | 188/191(98%) | 0/191(0%) | Plus/Minus |
Query 20 GKVCSLYQISPRITIWANVPGRIRRSFIR*LERKIVLFVFQQPRLMKVYMRISPHELSIKGKYF*IFHQFIDIDRSYFFCNSWKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP 592 GKVCSLYQISP ITIWANV GRIRRSFIR*LERKIVLFVFQQPRLMKVYM ISPHELSIKGKYF*IFHQFIDIDRSYFFCNSWKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP Subject 713 GKVCSLYQISPHITIWANVSGRIRRSFIR*LERKIVLFVFQQPRLMKVYMCISPHELSIKGKYF*IFHQFIDIDRSYFFCNSWKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP 1285
Range 7: 427 to 504 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
58.3 bits(121) | 0.0 | 24/26(92%) | 0/26(0%) | Plus/Minus |
Query 801 VCG*LPSSPKLFPCP*SSRTCLLLSQ 878 VCG*LPSSPKLFPCP*SSRTCL LS+ Subject 427 VCG*LPSSPKLFPCP*SSRTCLDLSR 504
Range 8: 559 to 594 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
30.4 bits(60) | 0.0 | 11/12(92%) | 0/12(0%) | Plus/Minus |
Query 711 P*PSYTAPSMQH 746 P*PSYTAPSM+H Subject 559 P*PSYTAPSMRH 594
Range 9: 694 to 1194 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
276.9 bits(598) | 0.0 | 166/167(99%) | 0/167(0%) | Minus/Plus |
Query 111 TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMEYHRNSXXXXXXXXXXXTICSTTTQY*HGI*LDSRRLEXXXXXXXXXXXTSSNYCKRSSYDRCL*IGEKFRNXXXXXXXXXXXYACRLS*VAVAERQTRLSFFQ 611 TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMEYHRNSFRTR*TAFVRRTICSTTTQY*HGI*LDSRRLETRR*RPITPYTTSSNYCKRSSYDRCL*IGEKFRNIYLLLIIHGGLY CRLS*VAVAERQTRLSFFQ Subject 694 TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMEYHRNSFRTR*TAFVRRTICSTTTQY*HGI*LDSRRLETRR*RPITPYTTSSNYCKRSSYDRCL*IGEKFRNIYLLLIIHGGLYTCRLS*VAVAERQTRLSFFQ 1194
Range 10: 439 to 642 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
157.3 bits(337) | 0.0 | 66/68(97%) | 0/68(0%) | Minus/Plus |
Query 663 QTSS*RLWARE*LWT*RELPTNRKLLTSQGKYQ*RWQ*RLMLH*WSCVRRLWAPMTQQLRQNSSCT*C 866 QTSS*RLWARE*LWT*RELPTNRKLLTSQGKYQ*RW+*RLM H*WSCVRRLWAPMTQQLRQNSSCT*C Subject 439 QTSS*RLWARE*LWT*RELPTNRKLLTSQGKYQ*RWR*RLMPH*WSCVRRLWAPMTQQLRQNSSCT*C 642
Grapevine leafroll associated virus 3 isolate 6 18 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130300.1 Length: 4711 Number of Matches: 11
Range 1: 646 to 1302 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
483.1 bits(1048) | 0.0 | 213/219(97%) | 0/219(0%) | Plus/Minus |
Query 3 DRVCLAGKSALCIK*ALV*LSGRTYPGGSGGASFADLKER*SCLSFSNRDS*KSTCV*APMNYQ*KVNISKFFTNL*TSIVATSFAIVGRRCVRCYRPLPSCF*TPAV*LNSMLVLRRC*TDRTSDERSLSCTERISVVLHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ 659 D++ + GKSALCIK*AL *LSGRTYPGGSGGASFADLKER*SCLSFSNRDS*KSTCV*APMNYQ*KVNISKFFTNL*TSIVATSFAIVGRRCVRCYRPLPSCF*TPAV*LNSMLVLRRC*TDRTSDERSLSCTERISVVLHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ Subject 646 DKL*VPGKSALCIK*ALT*LSGRTYPGGSGGASFADLKER*SCLSFSNRDS*KSTCV*APMNYQ*KVNISKFFTNL*TSIVATSFAIVGRRCVRCYRPLPSCF*TPAV*LNSMLVLRRC*TDRTSDERSLSCTERISVVLHAVP*PSRSSLVYHSGSP**RLV*STLDTALPGFHNPSKQQLV*CNHIPTPHISSFHHRFLCSQTL*TPSKTM*RTCKQ 1302
Range 2: 440 to 673 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
181.6 bits(390) | 0.0 | 77/78(99%) | 0/78(0%) | Plus/Minus |
Query 632 EDDVKNVQAICITYKKNFVLVAASSAPITFLHSSINAALIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLS 865 EDDVKNVQAICITYKKNFVL+AASSAPITFLHSSINAALIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLS Subject 440 EDDVKNVQAICITYKKNFVLIAASSAPITFLHSSINAALIFIATSTDTFPGSLITFGLWVTPVKSKAIPLPIVFKNLS 673
Range 3: 432 to 1289 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
633.9 bits(1377) | 0.0 | 276/286(97%) | 0/286(0%) | Plus/Minus |
Query 16 WRESLLFVSNKPSYNYLGERTREDQEELHSLT*KKDSLVCLSATATHESLHAYKPP*IINKR*IFLNFSPIYRHRSXXXXXXXXEDVV*GVIGRYRLVSKRLLSS*IPC*YCVVVEQIVRRTNAVYRVRKEFRWYSMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLSCCVIGAHNLLTQLHQCSINLHCHLY*YFPWLVNNFRFVGNSRQVQSYSLAHSLQELVCFY 873 +RESLLFVSNKPS+NYLGER REDQEELHSLT*KKDSLVCLSATATHESLH YKPP*IINKR*IFLNFSPIYR RS*LLLLQ*LEDVV*GVIGRYRLVSKRLLSS*IPC*YCVVVEQIVRRTNAVYRVRKEFRWYSMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCL+CCVIGAHNLLTQLHQC INLHCHLY*YFPWLVNNFRFVGNSRQVQSYSLAHSLQELV + Subject 432 YRESLLFVSNKPSHNYLGERIREDQEELHSLT*KKDSLVCLSATATHESLHVYKPP*IINKR*IFLNFSPIYRLRS*LLLLQ*LEDVV*GVIGRYRLVSKRLLSS*IPC*YCVVVEQIVRRTNAVYRVRKEFRWYSMLCHNLLVHH*FTIQGRRDEGWCEVR*ILPYRVFITRRSSSLFNAIIYPHRIYLLSIIGFYVVKLFELRRRRCKERASNLHHVQEEFCLNCCVIGAHNLLTQLHQCGINLHCHLY*YFPWLVNNFRFVGNSRQVQSYSLAHSLQELVWIF 1289
Range 4: 441 to 1304 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
623.8 bits(1355) | 0.0 | 277/288(96%) | 0/288(0%) | Minus/Plus |
Query 1 DKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADDAATKTKFFLYVMQIACXXXXXXXXXFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQLLQKK*LRSMSINW*KI*KYLPFIDNSWGLIRM*TFMSRGC*KTNKTIFLSSQRMKLLLILPGTFAQIVIRGLI*YKEQTFPPNTLYR 864 DKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADDAA KTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQLLQKK*LRS SINW*KI*KYLPFIDNSWGLI M*TFMSRGC*KTNKTIFLSSQRMKLLLILP TFAQIV+ GLI*YKEQTFP Y+ Subject 441 DKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADDAAIKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQLLQKK*LRSKSINW*KI*KYLPFIDNSWGLIHM*TFMSRGC*KTNKTIFLSSQRMKLLLILPDTFAQIVM*GLI*YKEQTFPVLKAYQ 1304
Range 5: 431 to 1303 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
621.9 bits(1351) | 0.0 | 282/291(97%) | 0/291(0%) | Minus/Plus |
Query 2 DKSRQVLEDYGQGNSFGLDGSYPQTESY*RARESISRGGNED*CCIDGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWSTTEILSVHXXXXXXXXXXXXXXRNTSMEFS*TAGV*KQDGNGR*HLTQRLPTIAKEVATIDVYKLVKNLEIFTFY**FMGAYTHVDFHESRLLKDKQDYLSFKSANEAPPDPPGYVRPDSYTRAYLIQRADFPAKHTLS 874 ++SRQVLEDYGQGNSFGLDGSYPQTESY*RARESISRGGNED*C IDGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWSTTEILSVHDRLRSSDVRSVQQRRNTSMEFS*TAGV*KQDGNGR*HLTQRLPTIAKEVATI+VYKLVKNLEIFTFY**FMGAYTHVDFHESRLLKDKQDYLSFKSANEAPPDPPGYVRPDSY RAYLIQRADFP +LS Subject 431 ERSRQVLEDYGQGNSFGLDGSYPQTESY*RARESISRGGNED*CRIDGAV*EGYGRR*RSN*DKILLVRDADCLHVLYIVFDGVQRV*LHRNR*WKEDICGVGI*LH*TSCCFDGL*KPGKAVSSVLHTNLHHGDPEW*TSDEREGYGTAWSTTEILSVHDRLRSSDVRSVQQRRNTSMEFS*TAGV*KQDGNGR*HLTQRLPTIAKEVATIEVYKLVKNLEIFTFY**FMGAYTHVDFHESRLLKDKQDYLSFKSANEAPPDPPGYVRPDSYVRAYLIQRADFPGTQSLS 1303
Range 6: 713 to 1285 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
448.3 bits(972) | 0.0 | 187/191(98%) | 0/191(0%) | Plus/Minus |
Query 20 GKVCSLYQISPRITIWANVPGRIRRSFIR*LERKIVLFVFQQPRLMKVYMRISPHELSIKGKYF*IFHQFIDIDRSYFFCNSWKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP 592 GKVCSLYQISP ITIWANV GRIRRSFIR*LERKIVLFVFQQPRLMKVYM ISPHELSIKGKYF*IFHQFID DRSYFFCNSWKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP Subject 713 GKVCSLYQISPHITIWANVSGRIRRSFIR*LERKIVLFVFQQPRLMKVYMCISPHELSIKGKYF*IFHQFIDFDRSYFFCNSWKTLCKVLSAVTVLFLNACCLAKFHASIASLLNRSYVGRTQSIVYGKNFGGTPCCAITFSFITSLPFRVAVMKVGVKYARYCLTGFS*PVEAAACLMQSYTHTAYIFFP 1285
Range 7: 427 to 504 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
58.3 bits(121) | 0.0 | 24/26(92%) | 0/26(0%) | Plus/Minus |
Query 801 VCG*LPSSPKLFPCP*SSRTCLLLSQ 878 VCG*LPSSPKLFPCP*SSRTCL LS+ Subject 427 VCG*LPSSPKLFPCP*SSRTCLDLSR 504
Range 8: 559 to 594 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
30.4 bits(60) | 0.0 | 11/12(92%) | 0/12(0%) | Plus/Minus |
Query 711 P*PSYTAPSMQH 746 P*PSYTAPSM+H Subject 559 P*PSYTAPSMRH 594
Range 9: 694 to 1194 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
272.3 bits(588) | 0.0 | 165/167(99%) | 0/167(0%) | Minus/Plus |
Query 111 TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMEYHRNSXXXXXXXXXXXTICSTTTQY*HGI*LDSRRLEXXXXXXXXXXXTSSNYCKRSSYDRCL*IGEKFRNXXXXXXXXXXXYACRLS*VAVAERQTRLSFFQ 611 TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMEYHRNSFRTR*TAFVRRTICSTTTQY*HGI*LDSRRLETRR*RPITPYTTSSNYCKRSSYDR L*IGEKFRNIYLLLIIHGGLY CRLS*VAVAERQTRLSFFQ Subject 694 TT*KPMMERRYMRCGYMIALNKLLLRRVMKTR*GSI*RTSHQPSSRRP*MVN***TRRLWHSMEYHRNSFRTR*TAFVRRTICSTTTQY*HGI*LDSRRLETRR*RPITPYTTSSNYCKRSSYDRSL*IGEKFRNIYLLLIIHGGLYTCRLS*VAVAERQTRLSFFQ 1194
Range 10: 439 to 642 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
159.1 bits(341) | 0.0 | 67/68(99%) | 0/68(0%) | Minus/Plus |
Query 663 QTSS*RLWARE*LWT*RELPTNRKLLTSQGKYQ*RWQ*RLMLH*WSCVRRLWAPMTQQLRQNSSCT*C 866 QTSS*RLWARE*LWT*RELPTNRKLLTSQGKYQ*RWQ*RLM H*WSCVRRLWAPMTQQLRQNSSCT*C Subject 439 QTSS*RLWARE*LWT*RELPTNRKLLTSQGKYQ*RWQ*RLMPH*WSCVRRLWAPMTQQLRQNSSCT*C 642
Nucleotide Sequence (1057 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
617.8 | 4062.0 | 36% | 0 | 94% | JX559645.1 | |
616.0 | 4051.9 | 36% | 0 | 93% | GQ352631.1 | |
621.0 | 4062.4 | 36% | 0 | 94% | KX756669.1 | |
616.4 | 4054.6 | 36% | 0 | 94% | EU344893.1 | |
617.4 | 4045.5 | 36% | 0 | 94% | GU983863.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 21
Range 1: 10253 to 10945 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
536.3 bits(1164) | 0.0 | 230/231(100%) | 0/231(0%) | Minus/Plus |
Query 247 *VYFLSLVLSYMTLRQNYEFSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC*AKVVS*FYIEVGVFVYGRF*TGNTVASSRFCLCDNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIWGQRLYSCGR*CLR*NPNFYT*R*QYLLNW*SCGESLS*RCRGKVVC*PEKVGRCDEG*RRTLRREIKTYIHRED 939 *VYFLSLVLSYMTLRQNYEFSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC*AKVVS*FYIEVGVFVYGRF*TGNTVASSRFCLCDNSVAGSYVCRPE+TAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIWGQRLYSCGR*CLR*NPNFYT*R*QYLLNW*SCGESLS*RCRGKVVC*PEKVGRCDEG*RRTLRREIKTYIHRED Subject 10253 *VYFLSLVLSYMTLRQNYEFSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC*AKVVS*FYIEVGVFVYGRF*TGNTVASSRFCLCDNSVAGSYVCRPEITAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIWGQRLYSCGR*CLR*NPNFYT*R*QYLLNW*SCGESLS*RCRGKVVC*PEKVGRCDEG*RRTLRREIKTYIHRED 10945
Range 2: 10994 to 11191 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
153.7 bits(329) | 0.0 | 65/66(98%) | 0/66(0%) | Minus/Plus |
Query 1 HLIEGR*RNMFILESLDTGVRKVYVYDGYSSCCNGTG*L*LL*TKLRC*GAKRSWYTG*RCC*RTD 198 HLIEGR*RNMFILESLDTGVRKVYVYDGYSSCCNGT *L*LL*TKLRC*GAKRSWYTG*RCC*RTD Subject 10994 HLIEGR*RNMFILESLDTGVRKVYVYDGYSSCCNGTS*L*LL*TKLRC*GAKRSWYTG*RCC*RTD 11191
Range 3: 10135 to 10206 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
59.7 bits(124) | 0.0 | 24/24(100%) | 0/24(0%) | Minus/Plus |
Query 986 YYVGYFGATPKVFPLCV*PLM*VS 1057 YYVGYFGATPKVFPLCV*PLM*VS Subject 10135 YYVGYFGATPKVFPLCV*PLM*VS 10206
Range 4: 10353 to 11189 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
617.8 bits(1342) | 0.0 | 277/279(99%) | 0/279(0%) | Plus/Minus |
Query 3 RFVNNTSNRYTKTF*RLNNEASFKGVIVXXXXXXXXXXXXXXIPFALQYQGSQE*TYYVNDPQ*GVWSGT*TSN**GASAVYLHGVCRF*FLDVTFDVIPRHTYPPFRVNIQPSLYTVTISFPRSFTN*VSTATFRYKNLGFNVNTTGHRSTTADPRWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYHKDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLSTKIIRVAPSPISLLRRTRSIPISRKNLFMSPLNLV 839 RFVNNTSNRYTKTF*RLNNEASFKGVIVS YRYNSCCNRRRRIPFALQYQGSQE*TYYVNDPQ*GVWSGT*TSN**GASAVYLHGVCRF*FLDVTFDVIPRHTYPPFRVNIQPSLYTVTISFPRSFTN*VSTATFRYKNLGFNVNTTGHRSTTADPRWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL* RDDKRKNQQQNYHKDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLSTKIIRVAPSPISLLRRTRSIPISRKNLFMSPLNLV Subject 10353 RFVNNTSNRYTKTF*RLNNEASFKGVIVSWYRYNSCCNRRRRIPFALQYQGSQE*TYYVNDPQ*GVWSGT*TSN**GASAVYLHGVCRF*FLDVTFDVIPRHTYPPFRVNIQPSLYTVTISFPRSFTN*VSTATFRYKNLGFNVNTTGHRSTTADPRWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*SRDDKRKNQQQNYHKDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLSTKIIRVAPSPISLLRRTRSIPISRKNLFMSPLNLV 11189
Range 5: 10135 to 10209 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
61.6 bits(128) | 0.0 | 24/25(96%) | 0/25(0%) | Plus/Minus |
Query 983 QRNLH*RLHTKRKNLWRSAKITYVI 1057 QRNLH*RLHTKRKNLWRSAK+TYVI Subject 10135 QRNLH*RLHTKRKNLWRSAKVTYVI 10209
Range 6: 10272 to 10313 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
36.3 bits(73) | 0.0 | 14/14(100%) | 0/14(0%) | Plus/Minus |
Query 879 KIHNFDVASYTTTL 920 KIHNFDVASYTTTL Subject 10272 KIHNFDVASYTTTL 10313
Range 7: 10580 to 11191 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
403.8 bits(875) | 0.0 | 204/204(100%) | 0/204(0%) | Plus/Minus |
Query 1 VGSLTTPLTGIPRPFSASTTKLRLKEL*SAGXXXXXXXXXXDVYLSHSSIKALKNKHITSTTLNKVSGXXXXXXXXXXXXLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPSTPSR*AFPAALPIK*VLLPSGIKIWVST*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR 612 VGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPSTPSR*AFPAALPIK*VLLPSGIKIWVST*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR Subject 10580 VGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPSTPSR*AFPAALPIK*VLLPSGIKIWVST*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR 11191
Range 8: 10238 to 10528 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
223.8 bits(482) | 0.0 | 96/97(99%) | 0/97(0%) | Plus/Minus |
Query 664 ACLKSSINKYAYFNIKSRYYLRSARRSFAWRLPRFLF*GELVLSQSRAKTYLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH*GKKINLDRRKE 954 ACLKSSINKYAYFNIKSRYYLRSARRSFAWRLPRFLF*GELVLSQSRAKTYLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH*GKKINL+RRKE Subject 10238 ACLKSSINKYAYFNIKSRYYLRSARRSFAWRLPRFLF*GELVLSQSRAKTYLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH*GKKINLNRRKE 10528
Range 9: 10137 to 10205 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
56.1 bits(116) | 0.0 | 23/23(100%) | 0/23(0%) | Plus/Minus |
Query 987 ETYIKGYTQRGKTFGVAPK*PT* 1055 ETYIKGYTQRGKTFGVAPK*PT* Subject 10137 ETYIKGYTQRGKTFGVAPK*PT* 10205
Range 10: 10596 to 11189 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
402.5 bits(872) | 0.0 | 198/198(100%) | 0/198(0%) | Minus/Plus |
Query 3 PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVETQIFIPEGSSTYLIGKAAGKAYRDGVEGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDXXXXXXXXXXXXGPDTLLRVVDVICLFLRALILECERYTSXXXXXXXXXVPADYNSFKRSFVVEALKGLGIPVRGVVNEP 596 PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVETQIFIPEGSSTYLIGKAAGKAYRDGVEGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEP Subject 10596 PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVETQIFIPEGSSTYLIGKAAGKAYRDGVEGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEP 11189
Range 11: 10269 to 10529 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
204.1 bits(439) | 0.0 | 87/87(100%) | 0/87(0%) | Minus/Plus |
Query 663 P*CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*VFARDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*AYLFMDDFKQA 923 P*CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*VFARDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*AYLFMDDFKQA Subject 10269 P*CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*VFARDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*AYLFMDDFKQA 10529
Range 12: 10137 to 10202 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.7 bits(113) | 0.0 | 21/22(95%) | 0/22(0%) | Minus/Plus |
Query 990 LRRLFWRYAKGFSSLCVAFNVG 1055 LRRL WRYAKGFSSLCVAFNVG Subject 10137 LRRLLWRYAKGFSSLCVAFNVG 10202
Range 13: 10528 to 10932 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
318.6 bits(689) | 0.0 | 134/135(99%) | 0/135(0%) | Plus/Minus |
Query 260 M*VLISRRNVRRYPSSHLPTFSG*HTTFPLHRHDKLSPQLYQLSKYCYLQV*KFGFQRKHYRPQEYNR*PQMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELSQRQNRLLATVL 664 M*VLISRRNVRRYPSSHLPTFSG*HTTFPLHRHDKLSPQLYQLSKYCYLQV*KFGFQRKHYRPQEYNR*PQMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAV SGRQT*EPATELSQRQNRLLATVL Subject 10528 M*VLISRRNVRRYPSSHLPTFSG*HTTFPLHRHDKLSPQLYQLSKYCYLQV*KFGFQRKHYRPQEYNR*PQMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVISGRQT*EPATELSQRQNRLLATVL 10932
Range 14: 10276 to 10479 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
166.5 bits(357) | 0.0 | 68/68(100%) | 0/68(0%) | Plus/Minus |
Query 713 HDTTFAQHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKENS*F*RSVIYDN 916 HDTTFAQHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKENS*F*RSVIYDN Subject 10276 HDTTFAQHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKENS*F*RSVIYDN 10479
Range 15: 10993 to 11067 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
61.6 bits(128) | 0.0 | 25/25(100%) | 0/25(0%) | Plus/Minus |
Query 125 TYTFRTPVSRLSRINILRQRPSIRC 199 TYTFRTPVSRLSRINILRQRPSIRC Subject 10993 TYTFRTPVSRLSRINILRQRPSIRC 11067
Range 16: 11116 to 11190 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
55.6 bits(115) | 0.0 | 25/25(100%) | 0/25(0%) | Plus/Minus |
Query 2 SVR*QHL*PVYQDLLAPQQRSFV*R 76 SVR*QHL*PVYQDLLAPQQRSFV*R Subject 11116 SVR*QHL*PVYQDLLAPQQRSFV*R 11190
Range 17: 10136 to 10183 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
37.7 bits(76) | 0.0 | 15/16(94%) | 0/16(0%) | Plus/Minus |
Query 1009 HKEEKPLA*RQNNLRN 1056 HKEEKPLA*RQ+NLRN Subject 10136 HKEEKPLA*RQSNLRN 10183
Range 18: 10288 to 10776 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
371.3 bits(804) | 0.0 | 162/163(99%) | 0/163(0%) | Minus/Plus |
Query 416 DATSKL*IFLRVGVVECVHRR*TRFSGDINRFLREIGIERVRLKREIGEGATRMIFVLSEGSIVILY*SRRICLWTILNRQYCC**SILSL**FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLKPKF 904 DATSKL*IFLRVGVVECVHRR*TRFSGDINRFLREIGIERVRLKREIGEGATRMIFVLSEGSIVILY*SRRICLWTILNRQYCC**SILSL**FCCWFLRLSSR YSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLKPKF Subject 10288 DATSKL*IFLRVGVVECVHRR*TRFSGDINRFLREIGIERVRLKREIGEGATRMIFVLSEGSIVILY*SRRICLWTILNRQYCC**SILSL**FCCWFLRLSSRDYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLKPKF 10776
Range 19: 10819 to 11064 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
178.4 bits(383) | 0.0 | 82/82(100%) | 0/82(0%) | Minus/Plus |
Query 128 RGKLIVTV*REGCMLTRKGG*V*RGITSNVTSRN*NLHTP*R*TAEAPY*LEV*VPDQTPY*GSLT*YVYS*EP*YWSAKGI 373 RGKLIVTV*REGCMLTRKGG*V*RGITSNVTSRN*NLHTP*R*TAEAPY*LEV*VPDQTPY*GSLT*YVYS*EP*YWSAKGI Subject 10819 RGKLIVTV*REGCMLTRKGG*V*RGITSNVTSRN*NLHTP*R*TAEAPY*LEV*VPDQTPY*GSLT*YVYS*EP*YWSAKGI 11064
Grapevine leafroll associated virus 3 isolate 621, complete genome
Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 21
Range 1: 10253 to 10945 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
536.3 bits(1164) | 0.0 | 230/231(100%) | 0/231(0%) | Minus/Plus |
Query 247 *VYFLSLVLSYMTLRQNYEFSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC*AKVVS*FYIEVGVFVYGRF*TGNTVASSRFCLCDNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIWGQRLYSCGR*CLR*NPNFYT*R*QYLLNW*SCGESLS*RCRGKVVC*PEKVGRCDEG*RRTLRREIKTYIHRED 939 *VYFLSLVLSYMTLRQNYEFSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC*AKVVS*FYIEVGVFVYGRF*TGNTVASSRFCLCDNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIWGQRLYSCGR*CLR*NPNFYT*R*QYLLNW*SCGESLS*RCRGKVVC*PEKVGRCDEG*RRTLRREIKTY+HRED Subject 10253 *VYFLSLVLSYMTLRQNYEFSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC*AKVVS*FYIEVGVFVYGRF*TGNTVASSRFCLCDNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIWGQRLYSCGR*CLR*NPNFYT*R*QYLLNW*SCGESLS*RCRGKVVC*PEKVGRCDEG*RRTLRREIKTYVHRED 10945
Range 2: 10994 to 11191 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
153.7 bits(329) | 0.0 | 65/66(98%) | 0/66(0%) | Minus/Plus |
Query 1 HLIEGR*RNMFILESLDTGVRKVYVYDGYSSCCNGTG*L*LL*TKLRC*GAKRSWYTG*RCC*RTD 198 HLIEGR*RNMFILESLDTGVRKVYVYDGYSSCCNGT *L*LL*TKLRC*GAKRSWYTG*RCC*RTD Subject 10994 HLIEGR*RNMFILESLDTGVRKVYVYDGYSSCCNGTS*L*LL*TKLRC*GAKRSWYTG*RCC*RTD 11191
Range 3: 10135 to 10206 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
59.7 bits(124) | 0.0 | 24/24(100%) | 0/24(0%) | Minus/Plus |
Query 986 YYVGYFGATPKVFPLCV*PLM*VS 1057 YYVGYFGATPKVFPLCV*PLM*VS Subject 10135 YYVGYFGATPKVFPLCV*PLM*VS 10206
Range 4: 10353 to 11189 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
616.0 bits(1338) | 0.0 | 277/279(99%) | 0/279(0%) | Plus/Minus |
Query 3 RFVNNTSNRYTKTF*RLNNEASFKGVIVXXXXXXXXXXXXXXIPFALQYQGSQE*TYYVNDPQ*GVWSGT*TSN**GASAVYLHGVCRF*FLDVTFDVIPRHTYPPFRVNIQPSLYTVTISFPRSFTN*VSTATFRYKNLGFNVNTTGHRSTTADPRWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYHKDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLSTKIIRVAPSPISLLRRTRSIPISRKNLFMSPLNLV 839 RFVNNTSNRYTKTF*RLNNEASFKGVIVS YRYNSCCNRRRRIPFALQYQGSQE*TYYVNDPQ*GVWSGT*TSN**GASAVYLHGV RF*FLDVTFDVIPRHTYPPFRVNIQPSLYTVTISFPRSFTN*VSTATFRYKNLGFNVNTTGHRSTTADPRWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYHKDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLSTKIIRVAPSPISLLRRTRSIPISRKNLFMSPLNLV Subject 10353 RFVNNTSNRYTKTF*RLNNEASFKGVIVSWYRYNSCCNRRRRIPFALQYQGSQE*TYYVNDPQ*GVWSGT*TSN**GASAVYLHGVRRF*FLDVTFDVIPRHTYPPFRVNIQPSLYTVTISFPRSFTN*VSTATFRYKNLGFNVNTTGHRSTTADPRWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYHKDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLSTKIIRVAPSPISLLRRTRSIPISRKNLFMSPLNLV 11189
Range 5: 10135 to 10209 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
61.6 bits(128) | 0.0 | 24/25(96%) | 0/25(0%) | Plus/Minus |
Query 983 QRNLH*RLHTKRKNLWRSAKITYVI 1057 QRNLH*RLHTKRKNLWRSAK+TYVI Subject 10135 QRNLH*RLHTKRKNLWRSAKVTYVI 10209
Range 6: 10272 to 10313 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
32.2 bits(64) | 0.0 | 13/14(93%) | 0/14(0%) | Plus/Minus |
Query 879 KIHNFDVASYTTTL 920 KIHNFDVAS TTTL Subject 10272 KIHNFDVASCTTTL 10313
Range 7: 10580 to 11191 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
403.8 bits(875) | 0.0 | 204/204(100%) | 0/204(0%) | Plus/Minus |
Query 1 VGSLTTPLTGIPRPFSASTTKLRLKEL*SAGXXXXXXXXXXDVYLSHSSIKALKNKHITSTTLNKVSGXXXXXXXXXXXXLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPSTPSR*AFPAALPIK*VLLPSGIKIWVST*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR 612 VGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPSTPSR*AFPAALPIK*VLLPSGIKIWVST*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR Subject 10580 VGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPSTPSR*AFPAALPIK*VLLPSGIKIWVST*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR 11191
Range 8: 10238 to 10528 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
223.3 bits(481) | 0.0 | 95/97(98%) | 0/97(0%) | Plus/Minus |
Query 664 ACLKSSINKYAYFNIKSRYYLRSARRSFAWRLPRFLF*GELVLSQSRAKTYLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH*GKKINLDRRKE 954 ACLKSSINKYAYFNIKSRYYLRSARRSFAWRLPRFLF*GELVLSQSRAKTYLCRH*TSSSADERTQRRLHEGKFIILT*RH+RQH*GKKINL+RRKE Subject 10238 ACLKSSINKYAYFNIKSRYYLRSARRSFAWRLPRFLF*GELVLSQSRAKTYLCRH*TSSSADERTQRRLHEGKFIILT*RHVRQH*GKKINLNRRKE 10528
Range 9: 10137 to 10205 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
56.1 bits(116) | 0.0 | 23/23(100%) | 0/23(0%) | Plus/Minus |
Query 987 ETYIKGYTQRGKTFGVAPK*PT* 1055 ETYIKGYTQRGKTFGVAPK*PT* Subject 10137 ETYIKGYTQRGKTFGVAPK*PT* 10205
Range 10: 10596 to 11189 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
402.5 bits(872) | 0.0 | 198/198(100%) | 0/198(0%) | Minus/Plus |
Query 3 PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVETQIFIPEGSSTYLIGKAAGKAYRDGVEGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDXXXXXXXXXXXXGPDTLLRVVDVICLFLRALILECERYTSXXXXXXXXXVPADYNSFKRSFVVEALKGLGIPVRGVVNEP 596 PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVETQIFIPEGSSTYLIGKAAGKAYRDGVEGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEP Subject 10596 PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVETQIFIPEGSSTYLIGKAAGKAYRDGVEGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEP 11189
Range 11: 10269 to 10529 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
201.8 bits(434) | 0.0 | 86/87(99%) | 0/87(0%) | Minus/Plus |
Query 663 P*CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*VFARDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*AYLFMDDFKQA 923 P*CCR *RYVKIMNFPSCRRR*VRSSALDEV*WRHK*VFARDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*AYLFMDDFKQA Subject 10269 P*CCRT*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*VFARDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*AYLFMDDFKQA 10529
Range 12: 10137 to 10202 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.7 bits(113) | 0.0 | 21/22(95%) | 0/22(0%) | Minus/Plus |
Query 990 LRRLFWRYAKGFSSLCVAFNVG 1055 LRRL WRYAKGFSSLCVAFNVG Subject 10137 LRRLLWRYAKGFSSLCVAFNVG 10202
Range 13: 10528 to 10929 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
319.1 bits(690) | 0.0 | 134/134(100%) | 0/134(0%) | Plus/Minus |
Query 263 *VLISRRNVRRYPSSHLPTFSG*HTTFPLHRHDKLSPQLYQLSKYCYLQV*KFGFQRKHYRPQEYNR*PQMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELSQRQNRLLATVL 664 *VLISRRNVRRYPSSHLPTFSG*HTTFPLHRHDKLSPQLYQLSKYCYLQV*KFGFQRKHYRPQEYNR*PQMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELSQRQNRLLATVL Subject 10528 *VLISRRNVRRYPSSHLPTFSG*HTTFPLHRHDKLSPQLYQLSKYCYLQV*KFGFQRKHYRPQEYNR*PQMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELSQRQNRLLATVL 10929
Range 14: 10276 to 10479 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
165.1 bits(354) | 0.0 | 67/68(99%) | 0/68(0%) | Plus/Minus |
Query 713 HDTTFAQHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKENS*F*RSVIYDN 916 HDTTFAQHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKENS*F*RSV+YDN Subject 10276 HDTTFAQHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKENS*F*RSVMYDN 10479
Range 15: 10993 to 11067 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
61.6 bits(128) | 0.0 | 25/25(100%) | 0/25(0%) | Plus/Minus |
Query 125 TYTFRTPVSRLSRINILRQRPSIRC 199 TYTFRTPVSRLSRINILRQRPSIRC Subject 10993 TYTFRTPVSRLSRINILRQRPSIRC 11067
Range 16: 11116 to 11190 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
55.6 bits(115) | 0.0 | 25/25(100%) | 0/25(0%) | Plus/Minus |
Query 2 SVR*QHL*PVYQDLLAPQQRSFV*R 76 SVR*QHL*PVYQDLLAPQQRSFV*R Subject 11116 SVR*QHL*PVYQDLLAPQQRSFV*R 11190
Range 17: 10136 to 10183 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
37.7 bits(76) | 0.0 | 15/16(94%) | 0/16(0%) | Plus/Minus |
Query 1009 HKEEKPLA*RQNNLRN 1056 HKEEKPLA*RQ+NLRN Subject 10136 HKEEKPLA*RQSNLRN 10183
Range 18: 10288 to 10776 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
374.5 bits(811) | 0.0 | 163/163(100%) | 0/163(0%) | Minus/Plus |
Query 416 DATSKL*IFLRVGVVECVHRR*TRFSGDINRFLREIGIERVRLKREIGEGATRMIFVLSEGSIVILY*SRRICLWTILNRQYCC**SILSL**FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLKPKF 904 DATSKL*IFLRVGVVECVHRR*TRFSGDINRFLREIGIERVRLKREIGEGATRMIFVLSEGSIVILY*SRRICLWTILNRQYCC**SILSL**FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLKPKF Subject 10288 DATSKL*IFLRVGVVECVHRR*TRFSGDINRFLREIGIERVRLKREIGEGATRMIFVLSEGSIVILY*SRRICLWTILNRQYCC**SILSL**FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLKPKF 10776
Range 19: 10819 to 11064 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
174.7 bits(375) | 0.0 | 81/82(99%) | 0/82(0%) | Minus/Plus |
Query 128 RGKLIVTV*REGCMLTRKGG*V*RGITSNVTSRN*NLHTP*R*TAEAPY*LEV*VPDQTPY*GSLT*YVYS*EP*YWSAKGI 373 RGKLIVTV*REGCMLTRKGG*V*RGITSNVTSRN*NL TP*R*TAEAPY*LEV*VPDQTPY*GSLT*YVYS*EP*YWSAKGI Subject 10819 RGKLIVTV*REGCMLTRKGG*V*RGITSNVTSRN*NLRTP*R*TAEAPY*LEV*VPDQTPY*GSLT*YVYS*EP*YWSAKGI 11064
Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome
Sequence ID: KX756669.1 Length: 18313 Number of Matches: 21
Range 1: 10068 to 10760 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
531.2 bits(1153) | 0.0 | 230/231(100%) | 0/231(0%) | Minus/Plus |
Query 247 *VYFLSLVLSYMTLRQNYEFSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC*AKVVS*FYIEVGVFVYGRF*TGNTVASSRFCLCDNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIWGQRLYSCGR*CLR*NPNFYT*R*QYLLNW*SCGESLS*RCRGKVVC*PEKVGRCDEG*RRTLRREIKTYIHRED 939 *VYFLSLVLSYMTLRQNYEFSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC*AKVVS*FYIEVGVFVYGRF*TGNTVASSRFCLCDNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIWGQRLYSCGR*CLR*NPNFYT*R*QYLLNW*SCGESLS*RCRGKVV *PEKVGRCDEG*RRTLRREIKTYIHRED Subject 10068 *VYFLSLVLSYMTLRQNYEFSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC*AKVVS*FYIEVGVFVYGRF*TGNTVASSRFCLCDNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIWGQRLYSCGR*CLR*NPNFYT*R*QYLLNW*SCGESLS*RCRGKVVR*PEKVGRCDEG*RRTLRREIKTYIHRED 10760
Range 2: 10809 to 11006 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
156.4 bits(335) | 0.0 | 66/66(100%) | 0/66(0%) | Minus/Plus |
Query 1 HLIEGR*RNMFILESLDTGVRKVYVYDGYSSCCNGTG*L*LL*TKLRC*GAKRSWYTG*RCC*RTD 198 HLIEGR*RNMFILESLDTGVRKVYVYDGYSSCCNGTG*L*LL*TKLRC*GAKRSWYTG*RCC*RTD Subject 10809 HLIEGR*RNMFILESLDTGVRKVYVYDGYSSCCNGTG*L*LL*TKLRC*GAKRSWYTG*RCC*RTD 11006
Range 3: 9950 to 10021 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
59.7 bits(124) | 0.0 | 24/24(100%) | 0/24(0%) | Minus/Plus |
Query 986 YYVGYFGATPKVFPLCV*PLM*VS 1057 YYVGYFGATPKVFPLCV*PLM*VS Subject 9950 YYVGYFGATPKVFPLCV*PLM*VS 10021
Range 4: 10168 to 11004 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
621.0 bits(1349) | 0.0 | 278/279(100%) | 0/279(0%) | Plus/Minus |
Query 3 RFVNNTSNRYTKTF*RLNNEASFKGVIVXXXXXXXXXXXXXXIPFALQYQGSQE*TYYVNDPQ*GVWSGT*TSN**GASAVYLHGVCRF*FLDVTFDVIPRHTYPPFRVNIQPSLYTVTISFPRSFTN*VSTATFRYKNLGFNVNTTGHRSTTADPRWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYHKDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLSTKIIRVAPSPISLLRRTRSIPISRKNLFMSPLNLV 839 RFVNNTSNRYTKTF*RLNNEASFKGVIVSRYRYNSCCNRRRRIPFALQYQGSQE*TYYVNDPQ*GVWSGT*TSN**GASAVYLHGVCRF*FLDVTFDVIPRHTYPPFRVN+QPSLYTVTISFPRSFTN*VSTATFRYKNLGFNVNTTGHRSTTADPRWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYHKDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLSTKIIRVAPSPISLLRRTRSIPISRKNLFMSPLNLV Subject 10168 RFVNNTSNRYTKTF*RLNNEASFKGVIVSRYRYNSCCNRRRRIPFALQYQGSQE*TYYVNDPQ*GVWSGT*TSN**GASAVYLHGVCRF*FLDVTFDVIPRHTYPPFRVNVQPSLYTVTISFPRSFTN*VSTATFRYKNLGFNVNTTGHRSTTADPRWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYHKDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLSTKIIRVAPSPISLLRRTRSIPISRKNLFMSPLNLV 11004
Range 5: 9950 to 10024 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
61.6 bits(128) | 0.0 | 24/25(96%) | 0/25(0%) | Plus/Minus |
Query 983 QRNLH*RLHTKRKNLWRSAKITYVI 1057 QRNLH*RLHTKRKNLWRSAK+TYVI Subject 9950 QRNLH*RLHTKRKNLWRSAKVTYVI 10024
Range 6: 10087 to 10128 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
36.3 bits(73) | 0.0 | 14/14(100%) | 0/14(0%) | Plus/Minus |
Query 879 KIHNFDVASYTTTL 920 KIHNFDVASYTTTL Subject 10087 KIHNFDVASYTTTL 10128
Range 7: 10395 to 11006 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
403.8 bits(875) | 0.0 | 204/204(100%) | 0/204(0%) | Plus/Minus |
Query 1 VGSLTTPLTGIPRPFSASTTKLRLKEL*SAGXXXXXXXXXXDVYLSHSSIKALKNKHITSTTLNKVSGXXXXXXXXXXXXLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPSTPSR*AFPAALPIK*VLLPSGIKIWVST*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR 612 VGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPSTPSR*AFPAALPIK*VLLPSGIKIWVST*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR Subject 10395 VGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPSTPSR*AFPAALPIK*VLLPSGIKIWVST*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR 11006
Range 8: 10053 to 10343 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
223.8 bits(482) | 0.0 | 96/97(99%) | 0/97(0%) | Plus/Minus |
Query 664 ACLKSSINKYAYFNIKSRYYLRSARRSFAWRLPRFLF*GELVLSQSRAKTYLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH*GKKINLDRRKE 954 ACLKSSINKYAYFNIKSRYYLRSARRSFAWRLPRFLF*GELVLSQSRAKTYLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH*GKKINL+RRKE Subject 10053 ACLKSSINKYAYFNIKSRYYLRSARRSFAWRLPRFLF*GELVLSQSRAKTYLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH*GKKINLNRRKE 10343
Range 9: 9952 to 10020 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
56.1 bits(116) | 0.0 | 23/23(100%) | 0/23(0%) | Plus/Minus |
Query 987 ETYIKGYTQRGKTFGVAPK*PT* 1055 ETYIKGYTQRGKTFGVAPK*PT* Subject 9952 ETYIKGYTQRGKTFGVAPK*PT* 10020
Range 10: 10411 to 11004 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
402.5 bits(872) | 0.0 | 198/198(100%) | 0/198(0%) | Minus/Plus |
Query 3 PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVETQIFIPEGSSTYLIGKAAGKAYRDGVEGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDXXXXXXXXXXXXGPDTLLRVVDVICLFLRALILECERYTSXXXXXXXXXVPADYNSFKRSFVVEALKGLGIPVRGVVNEP 596 PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVETQIFIPEGSSTYLIGKAAGKAYRDGVEGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEP Subject 10411 PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVETQIFIPEGSSTYLIGKAAGKAYRDGVEGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEP 11004
Range 11: 10084 to 10344 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
204.1 bits(439) | 0.0 | 87/87(100%) | 0/87(0%) | Minus/Plus |
Query 663 P*CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*VFARDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*AYLFMDDFKQA 923 P*CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*VFARDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*AYLFMDDFKQA Subject 10084 P*CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*VFARDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*AYLFMDDFKQA 10344
Range 12: 9952 to 10017 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.7 bits(113) | 0.0 | 21/22(95%) | 0/22(0%) | Minus/Plus |
Query 990 LRRLFWRYAKGFSSLCVAFNVG 1055 LRRL WRYAKGFSSLCVAFNVG Subject 9952 LRRLLWRYAKGFSSLCVAFNVG 10017
Range 13: 10343 to 10747 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
317.7 bits(687) | 0.0 | 134/135(99%) | 0/135(0%) | Plus/Minus |
Query 260 M*VLISRRNVRRYPSSHLPTFSG*HTTFPLHRHDKLSPQLYQLSKYCYLQV*KFGFQRKHYRPQEYNR*PQMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELSQRQNRLLATVL 664 M*VLISRRNVRRYPSSHLPTFSG* TTFPLHRHDKLSPQLYQLSKYCYLQV*KFGFQRKHYRPQEYNR*PQMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELSQRQNRLLATVL Subject 10343 M*VLISRRNVRRYPSSHLPTFSG*RTTFPLHRHDKLSPQLYQLSKYCYLQV*KFGFQRKHYRPQEYNR*PQMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELSQRQNRLLATVL 10747
Range 14: 10091 to 10294 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
166.5 bits(357) | 0.0 | 68/68(100%) | 0/68(0%) | Plus/Minus |
Query 713 HDTTFAQHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKENS*F*RSVIYDN 916 HDTTFAQHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKENS*F*RSVIYDN Subject 10091 HDTTFAQHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKENS*F*RSVIYDN 10294
Range 15: 10808 to 10882 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
61.6 bits(128) | 0.0 | 25/25(100%) | 0/25(0%) | Plus/Minus |
Query 125 TYTFRTPVSRLSRINILRQRPSIRC 199 TYTFRTPVSRLSRINILRQRPSIRC Subject 10808 TYTFRTPVSRLSRINILRQRPSIRC 10882
Range 16: 10931 to 11005 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
55.6 bits(115) | 0.0 | 25/25(100%) | 0/25(0%) | Plus/Minus |
Query 2 SVR*QHL*PVYQDLLAPQQRSFV*R 76 SVR*QHL*PVYQDLLAPQQRSFV*R Subject 10931 SVR*QHL*PVYQDLLAPQQRSFV*R 11005
Range 17: 9951 to 9998 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
37.7 bits(76) | 0.0 | 15/16(94%) | 0/16(0%) | Plus/Minus |
Query 1009 HKEEKPLA*RQNNLRN 1056 HKEEKPLA*RQ+NLRN Subject 9951 HKEEKPLA*RQSNLRN 9998
Range 18: 10103 to 10591 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
374.5 bits(811) | 0.0 | 163/163(100%) | 0/163(0%) | Minus/Plus |
Query 416 DATSKL*IFLRVGVVECVHRR*TRFSGDINRFLREIGIERVRLKREIGEGATRMIFVLSEGSIVILY*SRRICLWTILNRQYCC**SILSL**FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLKPKF 904 DATSKL*IFLRVGVVECVHRR*TRFSGDINRFLREIGIERVRLKREIGEGATRMIFVLSEGSIVILY*SRRICLWTILNRQYCC**SILSL**FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLKPKF Subject 10103 DATSKL*IFLRVGVVECVHRR*TRFSGDINRFLREIGIERVRLKREIGEGATRMIFVLSEGSIVILY*SRRICLWTILNRQYCC**SILSL**FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLKPKF 10591
Range 19: 10634 to 10879 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
175.6 bits(377) | 0.0 | 81/82(99%) | 0/82(0%) | Minus/Plus |
Query 128 RGKLIVTV*REGCMLTRKGG*V*RGITSNVTSRN*NLHTP*R*TAEAPY*LEV*VPDQTPY*GSLT*YVYS*EP*YWSAKGI 373 RGKLIVTV*REGC LTRKGG*V*RGITSNVTSRN*NLHTP*R*TAEAPY*LEV*VPDQTPY*GSLT*YVYS*EP*YWSAKGI Subject 10634 RGKLIVTV*REGCTLTRKGG*V*RGITSNVTSRN*NLHTP*R*TAEAPY*LEV*VPDQTPY*GSLT*YVYS*EP*YWSAKGI 10879
Grapevine leafroll associated virus 3 isolate Cl 766, complete genome
Sequence ID: EU344893.1 Length: 17919 Number of Matches: 21
Range 1: 9674 to 10366 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
528.0 bits(1146) | 0.0 | 229/231(99%) | 0/231(0%) | Minus/Plus |
Query 247 *VYFLSLVLSYMTLRQNYEFSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC*AKVVS*FYIEVGVFVYGRF*TGNTVASSRFCLCDNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIWGQRLYSCGR*CLR*NPNFYT*R*QYLLNW*SCGESLS*RCRGKVVC*PEKVGRCDEG*RRTLRREIKTYIHRED 939 *VYFLSLVLSYMTLRQNYEFSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC*AKVVS*FYIEVGVFVYGRF*TGNTVASSRFCLCDNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPI GQRLYSCGR*CLR*NPNF+T*R*QYLLNW*SCGESLS*RCRGKVVC*PEKVGRCDEG*RRTLRREIKTYIHRED Subject 9674 *VYFLSLVLSYMTLRQNYEFSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC*AKVVS*FYIEVGVFVYGRF*TGNTVASSRFCLCDNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIRGQRLYSCGR*CLR*NPNFHT*R*QYLLNW*SCGESLS*RCRGKVVC*PEKVGRCDEG*RRTLRREIKTYIHRED 10366
Range 2: 10415 to 10612 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
156.4 bits(335) | 0.0 | 66/66(100%) | 0/66(0%) | Minus/Plus |
Query 1 HLIEGR*RNMFILESLDTGVRKVYVYDGYSSCCNGTG*L*LL*TKLRC*GAKRSWYTG*RCC*RTD 198 HLIEGR*RNMFILESLDTGVRKVYVYDGYSSCCNGTG*L*LL*TKLRC*GAKRSWYTG*RCC*RTD Subject 10415 HLIEGR*RNMFILESLDTGVRKVYVYDGYSSCCNGTG*L*LL*TKLRC*GAKRSWYTG*RCC*RTD 10612
Range 3: 9556 to 9627 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
59.7 bits(124) | 0.0 | 24/24(100%) | 0/24(0%) | Minus/Plus |
Query 986 YYVGYFGATPKVFPLCV*PLM*VS 1057 YYVGYFGATPKVFPLCV*PLM*VS Subject 9556 YYVGYFGATPKVFPLCV*PLM*VS 9627
Range 4: 9774 to 10610 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
616.4 bits(1339) | 0.0 | 277/279(99%) | 0/279(0%) | Plus/Minus |
Query 3 RFVNNTSNRYTKTF*RLNNEASFKGVIVXXXXXXXXXXXXXXIPFALQYQGSQE*TYYVNDPQ*GVWSGT*TSN**GASAVYLHGVCRF*FLDVTFDVIPRHTYPPFRVNIQPSLYTVTISFPRSFTN*VSTATFRYKNLGFNVNTTGHRSTTADPRWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYHKDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLSTKIIRVAPSPISLLRRTRSIPISRKNLFMSPLNLV 839 RFVNNTSNRYTKTF*RLNNEASFKGVIVSRYRYNSCCNRRRRIPFALQYQGSQE*TYYVNDPQ*GVWSGT*TSN**GASAVYLHGVCRF*FLDVTFDVIPRHTYPPFRVNIQPSLYTVTISFPRSFTN*VSTATFRY+NLGFNVNTTGHRSTTADP WGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYHKDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLSTKIIRVAPSPISLLRRTRSIPISRKNLFMSPLNLV Subject 9774 RFVNNTSNRYTKTF*RLNNEASFKGVIVSRYRYNSCCNRRRRIPFALQYQGSQE*TYYVNDPQ*GVWSGT*TSN**GASAVYLHGVCRF*FLDVTFDVIPRHTYPPFRVNIQPSLYTVTISFPRSFTN*VSTATFRYENLGFNVNTTGHRSTTADPGWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYHKDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLSTKIIRVAPSPISLLRRTRSIPISRKNLFMSPLNLV 10610
Range 5: 9556 to 9630 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
61.6 bits(128) | 0.0 | 24/25(96%) | 0/25(0%) | Plus/Minus |
Query 983 QRNLH*RLHTKRKNLWRSAKITYVI 1057 QRNLH*RLHTKRKNLWRSAK+TYVI Subject 9556 QRNLH*RLHTKRKNLWRSAKVTYVI 9630
Range 6: 9693 to 9734 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
36.3 bits(73) | 0.0 | 14/14(100%) | 0/14(0%) | Plus/Minus |
Query 879 KIHNFDVASYTTTL 920 KIHNFDVASYTTTL Subject 9693 KIHNFDVASYTTTL 9734
Range 7: 10001 to 10612 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
402.5 bits(872) | 0.0 | 203/204(100%) | 0/204(0%) | Plus/Minus |
Query 1 VGSLTTPLTGIPRPFSASTTKLRLKEL*SAGXXXXXXXXXXDVYLSHSSIKALKNKHITSTTLNKVSGXXXXXXXXXXXXLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPSTPSR*AFPAALPIK*VLLPSGIKIWVST*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR 612 VGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPSTPSR*AFPAALPIK*VLLPSG+KIWVST*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR Subject 10001 VGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPSTPSR*AFPAALPIK*VLLPSGMKIWVST*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR 10612
Range 8: 9659 to 9949 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
223.8 bits(482) | 0.0 | 96/97(99%) | 0/97(0%) | Plus/Minus |
Query 664 ACLKSSINKYAYFNIKSRYYLRSARRSFAWRLPRFLF*GELVLSQSRAKTYLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH*GKKINLDRRKE 954 ACLKSSINKYAYFNIKSRYYLRSARRSFAWRLPRFLF*GELVLSQSRAKTYLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH*GKKINL+RRKE Subject 9659 ACLKSSINKYAYFNIKSRYYLRSARRSFAWRLPRFLF*GELVLSQSRAKTYLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH*GKKINLNRRKE 9949
Range 9: 9558 to 9626 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
56.1 bits(116) | 0.0 | 23/23(100%) | 0/23(0%) | Plus/Minus |
Query 987 ETYIKGYTQRGKTFGVAPK*PT* 1055 ETYIKGYTQRGKTFGVAPK*PT* Subject 9558 ETYIKGYTQRGKTFGVAPK*PT* 9626
Range 10: 10017 to 10610 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
402.5 bits(872) | 0.0 | 198/198(100%) | 0/198(0%) | Minus/Plus |
Query 3 PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVETQIFIPEGSSTYLIGKAAGKAYRDGVEGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDXXXXXXXXXXXXGPDTLLRVVDVICLFLRALILECERYTSXXXXXXXXXVPADYNSFKRSFVVEALKGLGIPVRGVVNEP 596 PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVETQIFIPEGSSTYLIGKAAGKAYRDGVEGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEP Subject 10017 PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVETQIFIPEGSSTYLIGKAAGKAYRDGVEGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEP 10610
Range 11: 9690 to 9950 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
204.1 bits(439) | 0.0 | 87/87(100%) | 0/87(0%) | Minus/Plus |
Query 663 P*CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*VFARDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*AYLFMDDFKQA 923 P*CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*VFARDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*AYLFMDDFKQA Subject 9690 P*CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*VFARDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*AYLFMDDFKQA 9950
Range 12: 9558 to 9623 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.7 bits(113) | 0.0 | 21/22(95%) | 0/22(0%) | Minus/Plus |
Query 990 LRRLFWRYAKGFSSLCVAFNVG 1055 LRRL WRYAKGFSSLCVAFNVG Subject 9558 LRRLLWRYAKGFSSLCVAFNVG 9623
Range 13: 9949 to 10353 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
319.5 bits(691) | 0.0 | 134/135(99%) | 0/135(0%) | Plus/Minus |
Query 260 M*VLISRRNVRRYPSSHLPTFSG*HTTFPLHRHDKLSPQLYQLSKYCYLQV*KFGFQRKHYRPQEYNR*PQMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELSQRQNRLLATVL 664 M*VLISRRNVRRYPSSHLPTFSG*HTTFPLHRHDKLSPQLYQLSKYCYLQV*KFGFQRKHYRPQEYNR*P+MGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELSQRQNRLLATVL Subject 9949 M*VLISRRNVRRYPSSHLPTFSG*HTTFPLHRHDKLSPQLYQLSKYCYLQV*KFGFQRKHYRPQEYNR*PRMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELSQRQNRLLATVL 10353
Range 14: 9697 to 9900 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
166.5 bits(357) | 0.0 | 68/68(100%) | 0/68(0%) | Plus/Minus |
Query 713 HDTTFAQHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKENS*F*RSVIYDN 916 HDTTFAQHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKENS*F*RSVIYDN Subject 9697 HDTTFAQHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKENS*F*RSVIYDN 9900
Range 15: 10414 to 10488 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
61.6 bits(128) | 0.0 | 25/25(100%) | 0/25(0%) | Plus/Minus |
Query 125 TYTFRTPVSRLSRINILRQRPSIRC 199 TYTFRTPVSRLSRINILRQRPSIRC Subject 10414 TYTFRTPVSRLSRINILRQRPSIRC 10488
Range 16: 10537 to 10611 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
55.6 bits(115) | 0.0 | 25/25(100%) | 0/25(0%) | Plus/Minus |
Query 2 SVR*QHL*PVYQDLLAPQQRSFV*R 76 SVR*QHL*PVYQDLLAPQQRSFV*R Subject 10537 SVR*QHL*PVYQDLLAPQQRSFV*R 10611
Range 17: 9557 to 9604 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
37.7 bits(76) | 0.0 | 15/16(94%) | 0/16(0%) | Plus/Minus |
Query 1009 HKEEKPLA*RQNNLRN 1056 HKEEKPLA*RQ+NLRN Subject 9557 HKEEKPLA*RQSNLRN 9604
Range 18: 9709 to 10197 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
371.3 bits(804) | 0.0 | 162/163(99%) | 0/163(0%) | Minus/Plus |
Query 416 DATSKL*IFLRVGVVECVHRR*TRFSGDINRFLREIGIERVRLKREIGEGATRMIFVLSEGSIVILY*SRRICLWTILNRQYCC**SILSL**FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLKPKF 904 DATSKL*IFLRVGVVECVHRR*TRFSGDINRFLREIGIERVRLKREIGEGATRMIFVLSEGSIVILY*SRRICLWTILNRQYCC**SILSL**FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPH GSAVVLLWPVVFTLKPKF Subject 9709 DATSKL*IFLRVGVVECVHRR*TRFSGDINRFLREIGIERVRLKREIGEGATRMIFVLSEGSIVILY*SRRICLWTILNRQYCC**SILSL**FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHPGSAVVLLWPVVFTLKPKF 10197
Range 19: 10240 to 10485 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
178.4 bits(383) | 0.0 | 82/82(100%) | 0/82(0%) | Minus/Plus |
Query 128 RGKLIVTV*REGCMLTRKGG*V*RGITSNVTSRN*NLHTP*R*TAEAPY*LEV*VPDQTPY*GSLT*YVYS*EP*YWSAKGI 373 RGKLIVTV*REGCMLTRKGG*V*RGITSNVTSRN*NLHTP*R*TAEAPY*LEV*VPDQTPY*GSLT*YVYS*EP*YWSAKGI Subject 10240 RGKLIVTV*REGCMLTRKGG*V*RGITSNVTSRN*NLHTP*R*TAEAPY*LEV*VPDQTPY*GSLT*YVYS*EP*YWSAKGI 10485
Grapevine leafroll associated virus 3 isolate WA MR, complete genome
Sequence ID: GU983863.1 Length: 18498 Number of Matches: 21
Range 1: 10253 to 10945 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
528.0 bits(1146) | 0.0 | 229/231(99%) | 0/231(0%) | Minus/Plus |
Query 247 *VYFLSLVLSYMTLRQNYEFSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC*AKVVS*FYIEVGVFVYGRF*TGNTVASSRFCLCDNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSRYRFWNHLQYNLLFPIWGQRLYSCGR*CLR*NPNFYT*R*QYLLNW*SCGESLS*RCRGKVVC*PEKVGRCDEG*RRTLRREIKTYIHRED 939 *VYFLSLVLSYMTLRQNYEFSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC*AKVVS*FYIEVGVFVYGRF*TGNTVASSRFCL DNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGS YRFWNHLQYNLLFPIWGQRLYSCGR*CLR*NPNFYT*R*QYLLNW*SCGESLS*RCRGKVVC*PEKVGRCDEG*RRTLRREIKTYIHRED Subject 10253 *VYFLSLVLSYMTLRQNYEFSFV*ASLSAFIGARRGLVAT*IGFCARLG*NEFALKEKSGKAPRE*SSC*AKVVS*FYIEVGVFVYGRF*TGNTVASSRFCLRDNSVAGSYVCRPEVTAKLHH*YRS*DSVIPPLVRYGSGYRFWNHLQYNLLFPIWGQRLYSCGR*CLR*NPNFYT*R*QYLLNW*SCGESLS*RCRGKVVC*PEKVGRCDEG*RRTLRREIKTYIHRED 10945
Range 2: 10994 to 11191 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
154.6 bits(331) | 0.0 | 65/66(98%) | 0/66(0%) | Minus/Plus |
Query 1 HLIEGR*RNMFILESLDTGVRKVYVYDGYSSCCNGTG*L*LL*TKLRC*GAKRSWYTG*RCC*RTD 198 HLIEGR*RNMFILESLDTGVRKVYVYDGYS CCNGTG*L*LL*TKLRC*GAKRSWYTG*RCC*RTD Subject 10994 HLIEGR*RNMFILESLDTGVRKVYVYDGYSGCCNGTG*L*LL*TKLRC*GAKRSWYTG*RCC*RTD 11191
Range 3: 10135 to 10206 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
57.0 bits(118) | 0.0 | 23/24(96%) | 0/24(0%) | Minus/Plus |
Query 986 YYVGYFGATPKVFPLCV*PLM*VS 1057 YYVGYFGATPKVFPLCV*P M*VS Subject 10135 YYVGYFGATPKVFPLCV*PSM*VS 10206
Range 4: 10353 to 11189 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
617.4 bits(1341) | 0.0 | 276/279(99%) | 0/279(0%) | Plus/Minus |
Query 3 RFVNNTSNRYTKTF*RLNNEASFKGVIVXXXXXXXXXXXXXXIPFALQYQGSQE*TYYVNDPQ*GVWSGT*TSN**GASAVYLHGVCRF*FLDVTFDVIPRHTYPPFRVNIQPSLYTVTISFPRSFTN*VSTATFRYKNLGFNVNTTGHRSTTADPRWGKANCTEGGSKIYTYFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYHKDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLSTKIIRVAPSPISLLRRTRSIPISRKNLFMSPLNLV 839 RFVNNTSNRYTKTF*RLNNEASFKGVIVSRYRYNS CNRRRRIPFALQYQGSQE*TYYVNDPQ*GVWSGT*TSN**GASAVYLHGVCRF*FLDVTFDVIPRHTYPPFRVNIQPSLYTVTISFPRSFTN*VSTATFRYKNLGFNVNTTGHRSTTADPRWGKANCTEGGSKIYT+FHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYH+DKIDY*QQYCLFKIVHKQIRLLQYKITILPSLSTKIIRVAPSPISLLRRTRSIPISRKNLFMSPLNLV Subject 10353 RFVNNTSNRYTKTF*RLNNEASFKGVIVSRYRYNSRCNRRRRIPFALQYQGSQE*TYYVNDPQ*GVWSGT*TSN**GASAVYLHGVCRF*FLDVTFDVIPRHTYPPFRVNIQPSLYTVTISFPRSFTN*VSTATFRYKNLGFNVNTTGHRSTTADPRWGKANCTEGGSKIYTHFHI*LKEESHCPKTCINGGALL*PRDDKRKNQQQNYHEDKIDY*QQYCLFKIVHKQIRLLQYKITILPSLSTKIIRVAPSPISLLRRTRSIPISRKNLFMSPLNLV 11189
Range 5: 10135 to 10209 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
61.6 bits(128) | 0.0 | 24/25(96%) | 0/25(0%) | Plus/Minus |
Query 983 QRNLH*RLHTKRKNLWRSAKITYVI 1057 QRNLH*RLHTKRKNLWRSAK+TYVI Subject 10135 QRNLH*RLHTKRKNLWRSAKVTYVI 10209
Range 6: 10272 to 10313 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
36.3 bits(73) | 0.0 | 14/14(100%) | 0/14(0%) | Plus/Minus |
Query 879 KIHNFDVASYTTTL 920 KIHNFDVASYTTTL Subject 10272 KIHNFDVASYTTTL 10313
Range 7: 10580 to 11191 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
403.8 bits(875) | 0.0 | 204/204(100%) | 0/204(0%) | Plus/Minus |
Query 1 VGSLTTPLTGIPRPFSASTTKLRLKEL*SAGXXXXXXXXXXDVYLSHSSIKALKNKHITSTTLNKVSGXXXXXXXXXXXXLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPSTPSR*AFPAALPIK*VLLPSGIKIWVST*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR 612 VGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPSTPSR*AFPAALPIK*VLLPSGIKIWVST*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR Subject 10580 VGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPSTPSR*AFPAALPIK*VLLPSGIKIWVST*TLPATGVQPLTPDGEKQIVLKVVPKSIPTSISN*RRNHTVLRPVLMVELCCNLGTTNVR 11191
Range 8: 10238 to 10528 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
223.8 bits(482) | 0.0 | 96/97(99%) | 0/97(0%) | Plus/Minus |
Query 664 ACLKSSINKYAYFNIKSRYYLRSARRSFAWRLPRFLF*GELVLSQSRAKTYLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH*GKKINLDRRKE 954 ACLKSSINKYAYFNIKSRYYLRSARRSFAWRLPRFLF*GELVLSQSRAKTYLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH*GKKINL+RRKE Subject 10238 ACLKSSINKYAYFNIKSRYYLRSARRSFAWRLPRFLF*GELVLSQSRAKTYLCRH*TSSSADERTQRRLHEGKFIILT*RHIRQH*GKKINLNRRKE 10528
Range 9: 10137 to 10205 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.2 bits(112) | 0.0 | 22/23(96%) | 0/23(0%) | Plus/Minus |
Query 987 ETYIKGYTQRGKTFGVAPK*PT* 1055 ETYI+GYTQRGKTFGVAPK*PT* Subject 10137 ETYIEGYTQRGKTFGVAPK*PT* 10205
Range 10: 10596 to 11189 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
402.5 bits(872) | 0.0 | 198/198(100%) | 0/198(0%) | Minus/Plus |
Query 3 PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVETQIFIPEGSSTYLIGKAAGKAYRDGVEGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDXXXXXXXXXXXXGPDTLLRVVDVICLFLRALILECERYTSXXXXXXXXXVPADYNSFKRSFVVEALKGLGIPVRGVVNEP 596 PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVETQIFIPEGSSTYLIGKAAGKAYRDGVEGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEP Subject 10596 PRLQQSSTINTGLRTV*FLL*LDMEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVETQIFIPEGSSTYLIGKAAGKAYRDGVEGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEP 11189
Range 11: 10269 to 10529 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
204.1 bits(439) | 0.0 | 87/87(100%) | 0/87(0%) | Minus/Plus |
Query 663 P*CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*VFARDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*AYLFMDDFKQA 923 P*CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*VFARDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*AYLFMDDFKQA Subject 10269 P*CCRI*RYVKIMNFPSCRRR*VRSSALDEV*WRHK*VFARDWDRTSSP*KRNRGRRHANDLRAERR*YRDFILK*AYLFMDDFKQA 10529
Range 12: 10137 to 10202 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.7 bits(113) | 0.0 | 21/22(95%) | 0/22(0%) | Minus/Plus |
Query 990 LRRLFWRYAKGFSSLCVAFNVG 1055 LRRL WRYAKGFSSLCVAFNVG Subject 10137 LRRLLWRYAKGFSSLCVAFNVG 10202
Range 13: 10528 to 10932 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
316.3 bits(684) | 0.0 | 133/135(99%) | 0/135(0%) | Plus/Minus |
Query 260 M*VLISRRNVRRYPSSHLPTFSG*HTTFPLHRHDKLSPQLYQLSKYCYLQV*KFGFQRKHYRPQEYNR*PQMGKSKLY*RWFQNLYLLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELSQRQNRLLATVL 664 M*VLISRRNVRRYPSSHLPTFSG*HTTFPLHRHDKLSPQLYQLSKYCYLQV*KFGFQRKHYRPQEYNR*PQMGKSKLY*RWFQNLY LPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELS+RQNRLLATVL Subject 10528 M*VLISRRNVRRYPSSHLPTFSG*HTTFPLHRHDKLSPQLYQLSKYCYLQV*KFGFQRKHYRPQEYNR*PQMGKSKLY*RWFQNLYPLPYLTKGGITLS*DLY*WWSFAVTSGRQT*EPATELSRRQNRLLATVL 10932
Range 14: 10276 to 10479 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
166.5 bits(357) | 0.0 | 68/68(100%) | 0/68(0%) | Plus/Minus |
Query 713 HDTTFAQHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKENS*F*RSVIYDN 916 HDTTFAQHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKENS*F*RSVIYDN Subject 10276 HDTTFAQHEDHSRGAFPDFSFKANSFYPNLAQKPIYVATKPRLAPMNALNDAYTKENS*F*RSVIYDN 10479
Range 15: 10993 to 11067 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
61.6 bits(128) | 0.0 | 25/25(100%) | 0/25(0%) | Plus/Minus |
Query 125 TYTFRTPVSRLSRINILRQRPSIRC 199 TYTFRTPVSRLSRINILRQRPSIRC Subject 10993 TYTFRTPVSRLSRINILRQRPSIRC 11067
Range 16: 11116 to 11190 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
55.6 bits(115) | 0.0 | 25/25(100%) | 0/25(0%) | Plus/Minus |
Query 2 SVR*QHL*PVYQDLLAPQQRSFV*R 76 SVR*QHL*PVYQDLLAPQQRSFV*R Subject 11116 SVR*QHL*PVYQDLLAPQQRSFV*R 11190
Range 17: 10136 to 10183 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
37.7 bits(76) | 0.0 | 15/16(94%) | 0/16(0%) | Plus/Minus |
Query 1009 HKEEKPLA*RQNNLRN 1056 HKEEKPLA*RQ+NLRN Subject 10136 HKEEKPLA*RQSNLRN 10183
Range 18: 10288 to 10776 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
369.5 bits(800) | 0.0 | 161/163(99%) | 0/163(0%) | Minus/Plus |
Query 416 DATSKL*IFLRVGVVECVHRR*TRFSGDINRFLREIGIERVRLKREIGEGATRMIFVLSEGSIVILY*SRRICLWTILNRQYCC**SILSL**FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK*V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLKPKF 904 DATSKL*IFLRVGVVECVHRR*TRFSGDINRFLREIGIERVRLKREIGEGATRMIFVLSEGSIVILY*SRRICLWTILNRQYCC**SILS **FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWK V*ILEPPSVQFAFPHLGSAVVLLWPVVFTLKPKF Subject 10288 DATSKL*IFLRVGVVECVHRR*TRFSGDINRFLREIGIERVRLKREIGEGATRMIFVLSEGSIVILY*SRRICLWTILNRQYCC**SILSS**FCCWFLRLSSRGYSKAPPLIQVLGQCDSSFS*IWKWV*ILEPPSVQFAFPHLGSAVVLLWPVVFTLKPKF 10776
Range 19: 10819 to 11064 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
178.4 bits(383) | 0.0 | 82/82(100%) | 0/82(0%) | Minus/Plus |
Query 128 RGKLIVTV*REGCMLTRKGG*V*RGITSNVTSRN*NLHTP*R*TAEAPY*LEV*VPDQTPY*GSLT*YVYS*EP*YWSAKGI 373 RGKLIVTV*REGCMLTRKGG*V*RGITSNVTSRN*NLHTP*R*TAEAPY*LEV*VPDQTPY*GSLT*YVYS*EP*YWSAKGI Subject 10819 RGKLIVTV*REGCMLTRKGG*V*RGITSNVTSRN*NLHTP*R*TAEAPY*LEV*VPDQTPY*GSLT*YVYS*EP*YWSAKGI 11064
Nucleotide Sequence (195 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
152.3 | 751.9 | 26% | 5.244e-36 | 95% | KJ174518.1 | |
152.3 | 751.9 | 26% | 5.244e-36 | 95% | GU812895.1 | |
152.3 | 751.9 | 26% | 5.244e-36 | 95% | GQ352632.1 | |
152.3 | 751.9 | 26% | 5.244e-36 | 95% | KX756668.1 | |
152.3 | 751.9 | 26% | 5.244e-36 | 95% | KX701860.1 |
Alignments
Grapevine leafroll associated virus 3, complete genome
Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 6
Range 1: 8497 to 8688 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
152.3 bits(326) | 0.0 | 64/64(100%) | 0/64(0%) | Minus/Plus |
Query 3 VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSENFGFDVKIFNQAAPYFCSKFLVQVEDSLFF 194 VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSENFGFDVKIFNQAAPYFCSKFLVQVEDSLFF Subject 8497 VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSENFGFDVKIFNQAAPYFCSKFLVQVEDSLFF 8688
Range 2: 8498 to 8689 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.9 bits(310) | 0.0 | 62/64(97%) | 0/64(0%) | Plus/Minus |
Query 2 QKRDYPRLELKT*NKNMEQLG*ISLRQNQNFHSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*V 193 QKRDYPRLELKT*NKNMEQLG*ISLRQNQNFHSEPTYQYLTAAD*I*GYH H*L+YNYNLIP*V Subject 8498 QKRDYPRLELKT*NKNMEQLG*ISLRQNQNFHSEPTYQYLTAAD*I*GYHRH*LRYNYNLIP*V 8689
Range 3: 8496 to 8690 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.4 bits(274) | 0.0 | 62/65(95%) | 0/65(0%) | Minus/Plus |
Query 1 ST*GIRL*LYCS*W***PHI*SAAVRY*YVGSE*KFWF*RKDI*PSCSIFLF*VFSSSRG*SLFC 195 ST*GIRL*LY S*W **P+I*SAAVRY*YVGSE*KFWF*RKDI*PSCSIFLF*VFSSSRG*SLFC Subject 8496 ST*GIRL*LYRS*WR**PYI*SAAVRY*YVGSE*KFWF*RKDI*PSCSIFLF*VFSSSRG*SLFC 8690
Range 4: 8547 to 8690 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.4 bits(239) | 0.0 | 47/48(98%) | 0/48(0%) | Plus/Minus |
Query 1 TKKRLSST*TKNLEQKYGAAWLNIFTSKPKFSLRTDVSISNGCRLNMR 144 TKKRLSST*TKNLEQKYGAAWLNIFTSKPKFSLRTDVSISNGCRLN+R Subject 8547 TKKRLSST*TKNLEQKYGAAWLNIFTSKPKFSLRTDVSISNGCRLNIR 8690
Range 5: 8497 to 8688 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.4 bits(239) | 0.0 | 61/64(95%) | 0/64(0%) | Plus/Minus |
Query 3 KKETILDLN*KLRTKIWSSLVKYLYVKTKIFTQNRRINI*RLPTKYEAXXXXXXXXXXXXSPKY 194 KKETILDLN*KLRTKIWSSLVKYLYVKTKIFTQNRRINI*RLPTKY+AII TNY+ITII*SPKY Subject 8497 KKETILDLN*KLRTKIWSSLVKYLYVKTKIFTQNRRINI*RLPTKYKAIIATNYDITII*SPKY 8688
Range 6: 8540 to 8689 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.4 bits(215) | 0.0 | 49/50(98%) | 0/50(0%) | Minus/Plus |
Query 2 MIASYLVGSR*ILIRRF*VKILVLT*RYLTKLLHIFVLSF*FKSRIVSFL 151 MIA YLVGSR*ILIRRF*VKILVLT*RYLTKLLHIFVLSF*FKSRIVSFL Subject 8540 MIALYLVGSR*ILIRRF*VKILVLT*RYLTKLLHIFVLSF*FKSRIVSFL 8689
Grapevine leafroll associated virus 3 isolate CN415 1 RNA dependent RNA polymerase gene, partial cds
Sequence ID: GU812895.1 Length: 947 Number of Matches: 6
Range 1: 701 to 892 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
152.3 bits(326) | 0.0 | 64/64(100%) | 0/64(0%) | Minus/Plus |
Query 3 VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSENFGFDVKIFNQAAPYFCSKFLVQVEDSLFF 194 VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSENFGFDVKIFNQAAPYFCSKFLVQVEDSLFF Subject 701 VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSENFGFDVKIFNQAAPYFCSKFLVQVEDSLFF 892
Range 2: 702 to 893 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.9 bits(310) | 0.0 | 62/64(97%) | 0/64(0%) | Plus/Minus |
Query 2 QKRDYPRLELKT*NKNMEQLG*ISLRQNQNFHSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*V 193 QKRDYPRLELKT*NKNMEQLG*ISLRQNQNFHSEPTYQYLTAAD*I*GYH H*L+YNYNLIP*V Subject 702 QKRDYPRLELKT*NKNMEQLG*ISLRQNQNFHSEPTYQYLTAAD*I*GYHRH*LRYNYNLIP*V 893
Range 3: 700 to 894 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.4 bits(274) | 0.0 | 62/65(95%) | 0/65(0%) | Minus/Plus |
Query 1 ST*GIRL*LYCS*W***PHI*SAAVRY*YVGSE*KFWF*RKDI*PSCSIFLF*VFSSSRG*SLFC 195 ST*GIRL*LY S*W **P+I*SAAVRY*YVGSE*KFWF*RKDI*PSCSIFLF*VFSSSRG*SLFC Subject 700 ST*GIRL*LYRS*WR**PYI*SAAVRY*YVGSE*KFWF*RKDI*PSCSIFLF*VFSSSRG*SLFC 894
Range 4: 751 to 894 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.4 bits(239) | 0.0 | 47/48(98%) | 0/48(0%) | Plus/Minus |
Query 1 TKKRLSST*TKNLEQKYGAAWLNIFTSKPKFSLRTDVSISNGCRLNMR 144 TKKRLSST*TKNLEQKYGAAWLNIFTSKPKFSLRTDVSISNGCRLN+R Subject 751 TKKRLSST*TKNLEQKYGAAWLNIFTSKPKFSLRTDVSISNGCRLNIR 894
Range 5: 701 to 892 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.4 bits(239) | 0.0 | 61/64(95%) | 0/64(0%) | Plus/Minus |
Query 3 KKETILDLN*KLRTKIWSSLVKYLYVKTKIFTQNRRINI*RLPTKYEAXXXXXXXXXXXXSPKY 194 KKETILDLN*KLRTKIWSSLVKYLYVKTKIFTQNRRINI*RLPTKY+AII TNY+ITII*SPKY Subject 701 KKETILDLN*KLRTKIWSSLVKYLYVKTKIFTQNRRINI*RLPTKYKAIIATNYDITII*SPKY 892
Range 6: 744 to 893 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.4 bits(215) | 0.0 | 49/50(98%) | 0/50(0%) | Minus/Plus |
Query 2 MIASYLVGSR*ILIRRF*VKILVLT*RYLTKLLHIFVLSF*FKSRIVSFL 151 MIA YLVGSR*ILIRRF*VKILVLT*RYLTKLLHIFVLSF*FKSRIVSFL Subject 744 MIALYLVGSR*ILIRRF*VKILVLT*RYLTKLLHIFVLSF*FKSRIVSFL 893
Grapevine leafroll associated virus 3 isolate 623, complete genome
Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 6
Range 1: 8497 to 8688 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
152.3 bits(326) | 0.0 | 64/64(100%) | 0/64(0%) | Minus/Plus |
Query 3 VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSENFGFDVKIFNQAAPYFCSKFLVQVEDSLFF 194 VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSENFGFDVKIFNQAAPYFCSKFLVQVEDSLFF Subject 8497 VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSENFGFDVKIFNQAAPYFCSKFLVQVEDSLFF 8688
Range 2: 8498 to 8689 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.9 bits(310) | 0.0 | 62/64(97%) | 0/64(0%) | Plus/Minus |
Query 2 QKRDYPRLELKT*NKNMEQLG*ISLRQNQNFHSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*V 193 QKRDYPRLELKT*NKNMEQLG*ISLRQNQNFHSEPTYQYLTAAD*I*GYH H*L+YNYNLIP*V Subject 8498 QKRDYPRLELKT*NKNMEQLG*ISLRQNQNFHSEPTYQYLTAAD*I*GYHRH*LRYNYNLIP*V 8689
Range 3: 8496 to 8690 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.4 bits(274) | 0.0 | 62/65(95%) | 0/65(0%) | Minus/Plus |
Query 1 ST*GIRL*LYCS*W***PHI*SAAVRY*YVGSE*KFWF*RKDI*PSCSIFLF*VFSSSRG*SLFC 195 ST*GIRL*LY S*W **P+I*SAAVRY*YVGSE*KFWF*RKDI*PSCSIFLF*VFSSSRG*SLFC Subject 8496 ST*GIRL*LYRS*WR**PYI*SAAVRY*YVGSE*KFWF*RKDI*PSCSIFLF*VFSSSRG*SLFC 8690
Range 4: 8547 to 8690 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.4 bits(239) | 0.0 | 47/48(98%) | 0/48(0%) | Plus/Minus |
Query 1 TKKRLSST*TKNLEQKYGAAWLNIFTSKPKFSLRTDVSISNGCRLNMR 144 TKKRLSST*TKNLEQKYGAAWLNIFTSKPKFSLRTDVSISNGCRLN+R Subject 8547 TKKRLSST*TKNLEQKYGAAWLNIFTSKPKFSLRTDVSISNGCRLNIR 8690
Range 5: 8497 to 8688 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.4 bits(239) | 0.0 | 61/64(95%) | 0/64(0%) | Plus/Minus |
Query 3 KKETILDLN*KLRTKIWSSLVKYLYVKTKIFTQNRRINI*RLPTKYEAXXXXXXXXXXXXSPKY 194 KKETILDLN*KLRTKIWSSLVKYLYVKTKIFTQNRRINI*RLPTKY+AII TNY+ITII*SPKY Subject 8497 KKETILDLN*KLRTKIWSSLVKYLYVKTKIFTQNRRINI*RLPTKYKAIIATNYDITII*SPKY 8688
Range 6: 8540 to 8689 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.4 bits(215) | 0.0 | 49/50(98%) | 0/50(0%) | Minus/Plus |
Query 2 MIASYLVGSR*ILIRRF*VKILVLT*RYLTKLLHIFVLSF*FKSRIVSFL 151 MIA YLVGSR*ILIRRF*VKILVLT*RYLTKLLHIFVLSF*FKSRIVSFL Subject 8540 MIALYLVGSR*ILIRRF*VKILVLT*RYLTKLLHIFVLSF*FKSRIVSFL 8689
Grapevine leafroll associated virus 3 isolate TC BR, complete genome
Sequence ID: KX756668.1 Length: 18498 Number of Matches: 6
Range 1: 8497 to 8688 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
152.3 bits(326) | 0.0 | 64/64(100%) | 0/64(0%) | Minus/Plus |
Query 3 VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSENFGFDVKIFNQAAPYFCSKFLVQVEDSLFF 194 VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSENFGFDVKIFNQAAPYFCSKFLVQVEDSLFF Subject 8497 VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSENFGFDVKIFNQAAPYFCSKFLVQVEDSLFF 8688
Range 2: 8498 to 8689 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.9 bits(310) | 0.0 | 62/64(97%) | 0/64(0%) | Plus/Minus |
Query 2 QKRDYPRLELKT*NKNMEQLG*ISLRQNQNFHSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*V 193 QKRDYPRLELKT*NKNMEQLG*ISLRQNQNFHSEPTYQYLTAAD*I*GYH H*L+YNYNLIP*V Subject 8498 QKRDYPRLELKT*NKNMEQLG*ISLRQNQNFHSEPTYQYLTAAD*I*GYHRH*LRYNYNLIP*V 8689
Range 3: 8496 to 8690 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.4 bits(274) | 0.0 | 62/65(95%) | 0/65(0%) | Minus/Plus |
Query 1 ST*GIRL*LYCS*W***PHI*SAAVRY*YVGSE*KFWF*RKDI*PSCSIFLF*VFSSSRG*SLFC 195 ST*GIRL*LY S*W **P+I*SAAVRY*YVGSE*KFWF*RKDI*PSCSIFLF*VFSSSRG*SLFC Subject 8496 ST*GIRL*LYRS*WR**PYI*SAAVRY*YVGSE*KFWF*RKDI*PSCSIFLF*VFSSSRG*SLFC 8690
Range 4: 8547 to 8690 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.4 bits(239) | 0.0 | 47/48(98%) | 0/48(0%) | Plus/Minus |
Query 1 TKKRLSST*TKNLEQKYGAAWLNIFTSKPKFSLRTDVSISNGCRLNMR 144 TKKRLSST*TKNLEQKYGAAWLNIFTSKPKFSLRTDVSISNGCRLN+R Subject 8547 TKKRLSST*TKNLEQKYGAAWLNIFTSKPKFSLRTDVSISNGCRLNIR 8690
Range 5: 8497 to 8688 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.4 bits(239) | 0.0 | 61/64(95%) | 0/64(0%) | Plus/Minus |
Query 3 KKETILDLN*KLRTKIWSSLVKYLYVKTKIFTQNRRINI*RLPTKYEAXXXXXXXXXXXXSPKY 194 KKETILDLN*KLRTKIWSSLVKYLYVKTKIFTQNRRINI*RLPTKY+AII TNY+ITII*SPKY Subject 8497 KKETILDLN*KLRTKIWSSLVKYLYVKTKIFTQNRRINI*RLPTKYKAIIATNYDITII*SPKY 8688
Range 6: 8540 to 8689 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.4 bits(215) | 0.0 | 49/50(98%) | 0/50(0%) | Minus/Plus |
Query 2 MIASYLVGSR*ILIRRF*VKILVLT*RYLTKLLHIFVLSF*FKSRIVSFL 151 MIA YLVGSR*ILIRRF*VKILVLT*RYLTKLLHIFVLSF*FKSRIVSFL Subject 8540 MIALYLVGSR*ILIRRF*VKILVLT*RYLTKLLHIFVLSF*FKSRIVSFL 8689
Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome
Sequence ID: KX701860.1 Length: 18020 Number of Matches: 6
Range 1: 8015 to 8206 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
152.3 bits(326) | 0.0 | 64/64(100%) | 0/64(0%) | Minus/Plus |
Query 3 VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSENFGFDVKIFNQAAPYFCSKFLVQVEDSLFF 194 VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSENFGFDVKIFNQAAPYFCSKFLVQVEDSLFF Subject 8015 VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSENFGFDVKIFNQAAPYFCSKFLVQVEDSLFF 8206
Range 2: 8016 to 8207 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.9 bits(310) | 0.0 | 62/64(97%) | 0/64(0%) | Plus/Minus |
Query 2 QKRDYPRLELKT*NKNMEQLG*ISLRQNQNFHSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*V 193 QKRDYPRLELKT*NKNMEQLG*ISLRQNQNFHSEPTYQYLTAAD*I*GYH H*L+YNYNLIP*V Subject 8016 QKRDYPRLELKT*NKNMEQLG*ISLRQNQNFHSEPTYQYLTAAD*I*GYHRH*LRYNYNLIP*V 8207
Range 3: 8014 to 8208 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.4 bits(274) | 0.0 | 62/65(95%) | 0/65(0%) | Minus/Plus |
Query 1 ST*GIRL*LYCS*W***PHI*SAAVRY*YVGSE*KFWF*RKDI*PSCSIFLF*VFSSSRG*SLFC 195 ST*GIRL*LY S*W **P+I*SAAVRY*YVGSE*KFWF*RKDI*PSCSIFLF*VFSSSRG*SLFC Subject 8014 ST*GIRL*LYRS*WR**PYI*SAAVRY*YVGSE*KFWF*RKDI*PSCSIFLF*VFSSSRG*SLFC 8208
Range 4: 8065 to 8208 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.4 bits(239) | 0.0 | 47/48(98%) | 0/48(0%) | Plus/Minus |
Query 1 TKKRLSST*TKNLEQKYGAAWLNIFTSKPKFSLRTDVSISNGCRLNMR 144 TKKRLSST*TKNLEQKYGAAWLNIFTSKPKFSLRTDVSISNGCRLN+R Subject 8065 TKKRLSST*TKNLEQKYGAAWLNIFTSKPKFSLRTDVSISNGCRLNIR 8208
Range 5: 8015 to 8206 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.4 bits(239) | 0.0 | 61/64(95%) | 0/64(0%) | Plus/Minus |
Query 3 KKETILDLN*KLRTKIWSSLVKYLYVKTKIFTQNRRINI*RLPTKYEAXXXXXXXXXXXXSPKY 194 KKETILDLN*KLRTKIWSSLVKYLYVKTKIFTQNRRINI*RLPTKY+AII TNY+ITII*SPKY Subject 8015 KKETILDLN*KLRTKIWSSLVKYLYVKTKIFTQNRRINI*RLPTKYKAIIATNYDITII*SPKY 8206
Range 6: 8058 to 8207 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.4 bits(215) | 0.0 | 49/50(98%) | 0/50(0%) | Minus/Plus |
Query 2 MIASYLVGSR*ILIRRF*VKILVLT*RYLTKLLHIFVLSF*FKSRIVSFL 151 MIA YLVGSR*ILIRRF*VKILVLT*RYLTKLLHIFVLSF*FKSRIVSFL Subject 8058 MIALYLVGSR*ILIRRF*VKILVLT*RYLTKLLHIFVLSF*FKSRIVSFL 8207
Nucleotide Sequence (769 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
539.9 | 2935.1 | 27% | 1.493e-151 | 92% | KX756668.1 | |
538.1 | 2935.6 | 27% | 5.318e-151 | 92% | KX701860.1 | |
533.5 | 2895.7 | 27% | 1.274e-149 | 89% | KJ174518.1 | |
533.5 | 2883.3 | 27% | 1.274e-149 | 88% | EU259806.1 | |
531.7 | 2869.6 | 36% | 4.537e-149 | 90% | GQ352632.1 |
Alignments
Grapevine leafroll associated virus 3 isolate TC BR, complete genome
Sequence ID: KX756668.1 Length: 18498 Number of Matches: 8
Range 1: 996 to 1736 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
539.9 bits(1172) | 0.0 | 240/247(97%) | 0/247(0%) | Plus/Plus |
Query 29 GCVWVVRGDGKKVLMEARXXXXXXXXXXXXXXXFEAVTHALIVVHYHRVVPFTPVKREQPKRAVKQDEQKPKRQASQWAVKPTAVGVHVPLPNKQEAPKPAQSVPQQSLEEKATLTFGLFFSKGGGDESGGVILRKGKLFNRALNVPINVKNTFVWAKIWDEASRRRGYFYVKDSIVKFFPIVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFS 769 G V V+RGDGKKVLMEARTSTSAVSDASSYD VFEAVTHALIVVHYHRVVPFTPVKREQPK AVKQDEQKPKRQASQWAVKPTAVGVHVPLPNKQEAPKPAQSVPQQSLEEKATLTFGLFFSKGGGDES VILRKGKLFNRALNVPINVKNTFVWAKIWDEASRRRGYFYVKDSIVKFFPIVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFS Subject 996 GTVSVLRGDGKKVLMEARTSTSAVSDASSYDVVFEAVTHALIVVHYHRVVPFTPVKREQPKPAVKQDEQKPKRQASQWAVKPTAVGVHVPLPNKQEAPKPAQSVPQQSLEEKATLTFGLFFSKGGGDESDAVILRKGKLFNRALNVPINVKNTFVWAKIWDEASRRRGYFYVKDSIVKFFPIVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFS 1736
Range 2: 995 to 1735 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
511.5 bits(1110) | 0.0 | 240/247(97%) | 0/247(0%) | Minus/Minus |
Query 28 EKEDEKQRRXXXXXXXXXXLNQHHPLVVLTNALSRMLHNSIRGKATSHPGAVFTMKSSIVALPRTIGKNLTMLSLT*KYPLLREASSQILAQTKVFLTLIGTLRALLNNFPFRKMTXXXXXXXXXLKKRPNVRVAFSSNDCCGTDCAGFGASCLFGSGTWTPTAVGLTAHCDACRLGFCSSCLTARLGCSRLTGVNGTTRW*CTTINACVTASNTAS*LDASETAEVEVLASIKTFLPSPLTTQTHP 768 EKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNALSRMLHNSIRGKATSHPGAVFTMKSSIVALPRTIGKNLTMLSLT*KYPLLREASSQILAQTKVFLTLIGTLRALLNNFPFRKMT LSSPPPLLKKRPNVRVAFSSNDCCGTDCAGFGASCLFGSGTWTPTAVGLTAHCDACRLGFCSSCLTA LGCSRLTGVNGTTRW*CTTINACVTASNT S*LDASETAEVEVLASIKTFLPSPL T T P Subject 995 EKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNALSRMLHNSIRGKATSHPGAVFTMKSSIVALPRTIGKNLTMLSLT*KYPLLREASSQILAQTKVFLTLIGTLRALLNNFPFRKMTASLSSPPPLLKKRPNVRVAFSSNDCCGTDCAGFGASCLFGSGTWTPTAVGLTAHCDACRLGFCSSCLTAGLGCSRLTGVNGTTRW*CTTINACVTASNTTS*LDASETAEVEVLASIKTFLPSPLNTLTVP 1735
Range 3: 1332 to 1736 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
328.2 bits(710) | 0.0 | 132/135(98%) | 0/135(0%) | Minus/Minus |
Query 365 RKGR*EATTSVNFSPQPLIVKPTPPFGSAHERPFAHAPQLYTW*GNITPWGRIHNEIFNCSPTPHDREELNNAILDIKISSPTRGFIPNFGPNKGVLNIDRNVKSPVEQLPFPQDDAAALIAPTFTEEKAKRQSG 769 RKGR*EATTSVNFSPQPLIVKPTPPFGSAHERPFAHAPQLYTW*GNITPWGRIHNEIFNCSPTPHDREELNNAILDIKISSPTRGFIPNFGPNKGVLNIDRNVKSPVEQ PFPQDD ALIAPTFTEEKAKRQSG Subject 1332 RKGR*EATTSVNFSPQPLIVKPTPPFGSAHERPFAHAPQLYTW*GNITPWGRIHNEIFNCSPTPHDREELNNAILDIKISSPTRGFIPNFGPNKGVLNIDRNVKSPVEQFPFPQDDGVALIAPTFTEEKAKRQSG 1736
Range 4: 1002 to 1274 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
176.1 bits(378) | 0.0 | 84/91(92%) | 0/91(0%) | Minus/Minus |
Query 35 IRKWYMDANSCWLNSPXXXXXXXXXXXLFDSPFRLLALDRGKRHYPVVVYNNQRMCYSFKHGVVTRRVGNCRS*GPRLHQNLLTIPPHYPN 307 IRKWYMDANSCWLNSPL*RLPFGLLLILFDS FRLLALD GKRHYPVVVYNNQRMCYSFK+ VVTRRVGNCRS*GPRLHQNLLTIP Y N Subject 1002 IRKWYMDANSCWLNSPL*RLPFGLLLILFDSRFRLLALDGGKRHYPVVVYNNQRMCYSFKYDVVTRRVGNCRS*GPRLHQNLLTIPSQYTN 1274
Range 5: 1108 to 1734 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
466.1 bits(1011) | 0.0 | 207/209(99%) | 0/209(0%) | Minus/Minus |
Query 141 KRKMRSNDVCKFLPSASHC*TNTTLW*CSRTPFRACSTTLYVVRQHHTLGPYSQ*NLQL*PYPAR*GRT*QCYP*HKNILSYERLHPKFWPKQRCS*H**ER*EPC*TTSLSAXXXXRSHRPHLY*RKGQTSEWPSPPTTVVEQIALVLVLPAYSEVVHGRQQLLA*QPIVTLAVWASAHLV*QPV*AARA*QG*TALPGGSVQQSTHV 767 KRKMRSNDVCKFLPSASHC*TNTTLW*CSRTPFRACSTTLYVVRQHHTLGPYSQ*NLQL*PYPAR*GRT*QCYP*HKNILSYERLHPKFWPKQRCS*H**ER*EPC*T SLSAR*RRRSHRPHLY*RKGQTSEWPSPPTTVVEQIALVLVLPAYSEVVHGRQQLLA*QPIVTLAVWASAHLV*QPV*AARA*+G*TALPGGSVQQSTHV Subject 1108 KRKMRSNDVCKFLPSASHC*TNTTLW*CSRTPFRACSTTLYVVRQHHTLGPYSQ*NLQL*PYPAR*GRT*QCYP*HKNILSYERLHPKFWPKQRCS*H**ER*EPC*TISLSAR*RRRSHRPHLY*RKGQTSEWPSPPTTVVEQIALVLVLPAYSEVVHGRQQLLA*QPIVTLAVWASAHLV*QPV*AARA*RG*TALPGGSVQQSTHV 1734
Range 6: 1036 to 1734 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
449.2 bits(974) | 0.0 | 226/233(97%) | 0/233(0%) | Plus/Plus |
Query 69 *WRRGPQLLQFPTRLVTTPCLKL*HMR*LLYTTTG*CRXXXXXXXXXXXXXNKMSRSPNGKRHNGLLSQQLLASMYHFRISRKHQNQRNLFHNSRWRRRPL*RLAFSSVKVGAMRXXXXXXXXXXXXTGLLTFLSMLRTPLFGPKFGMKPLVGEDIFMSRIAXXXXXXXCGVGLQLKISL*IRPQGVMLPYHV*SCGACAKGRS*ALPKGGVGLTMRG*GEKFTDVVASHLPF 767 *WRRGPQLLQFPTRLVTT LKL*HMR*LLYTTTG*CRLP SSASSLN LSNKMSRSPNGKRHNGLLSQQLLASMYHFRISRKHQNQRNLFHNSRWRRRPL*RLAFSSVKVGAMRA SSCGKG+CSTGLLTFLSMLRTPLFGPKFGMKPLVGEDIFMSRIALLSSSLSCGVGLQLKISL*IRPQGVMLPYHV*SCGACAKGRS*ALPKGGVGLTMRG*GEKFTDVVASHLPF Subject 1036 *WRRGPQLLQFPTRLVTTSYLKL*HMR*LLYTTTG*CRLPPSSASSLNRLSNKMSRSPNGKRHNGLLSQQLLASMYHFRISRKHQNQRNLFHNSRWRRRPL*RLAFSSVKVGAMRATPSSCGKGNCSTGLLTFLSMLRTPLFGPKFGMKPLVGEDIFMSRIALLSSSLSCGVGLQLKISL*IRPQGVMLPYHV*SCGACAKGRS*ALPKGGVGLTMRG*GEKFTDVVASHLPF 1734
Range 7: 1409 to 1735 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
251.2 bits(542) | 0.0 | 108/109(99%) | 0/109(0%) | Plus/Plus |
Query 442 VVQQGS*RSYQC*EHLCLGQNLG*SLS*ERIFLCQG*HC*VLPYRAG*GYN*RFHCEYGPRV*CCLTTYRVVEHARKGVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLF 768 +VQQGS*RSYQC*EHLCLGQNLG*SLS*ERIFLCQG*HC*VLPYRAG*GYN*RFHCEYGPRV*CCLTTYRVVEHARKGVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLF Subject 1409 IVQQGS*RSYQC*EHLCLGQNLG*SLS*ERIFLCQG*HC*VLPYRAG*GYN*RFHCEYGPRV*CCLTTYRVVEHARKGVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLF 1735
Range 8: 1100 to 1360 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
212.8 bits(458) | 0.0 | 86/87(99%) | 0/87(0%) | Plus/Plus |
Query 133 SCNTCVDCCTLPPGSAVYPCQARAA*TGCQTR*AEAQTASVTMGC*ANSCWRPCTTSE*AGSTKTSAICSTTVVGGEGHSDVWPFLQ 393 SCNTCVDCCTLPPGSAVYP QARAA*TGCQTR*AEAQTASVTMGC*ANSCWRPCTTSE*AGSTKTSAICSTTVVGGEGHSDVWPFLQ Subject 1100 SCNTCVDCCTLPPGSAVYPRQARAA*TGCQTR*AEAQTASVTMGC*ANSCWRPCTTSE*AGSTKTSAICSTTVVGGEGHSDVWPFLQ 1360
Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome
Sequence ID: KX701860.1 Length: 18020 Number of Matches: 8
Range 1: 514 to 1254 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
538.1 bits(1168) | 0.0 | 240/247(97%) | 0/247(0%) | Plus/Plus |
Query 29 GCVWVVRGDGKKVLMEARXXXXXXXXXXXXXXXFEAVTHALIVVHYHRVVPFTPVKREQPKRAVKQDEQKPKRQASQWAVKPTAVGVHVPLPNKQEAPKPAQSVPQQSLEEKATLTFGLFFSKGGGDESGGVILRKGKLFNRALNVPINVKNTFVWAKIWDEASRRRGYFYVKDSIVKFFPIVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFS 769 G V +RGDGKKVLMEARTSTSAVSDASSYDAVFEAVTHALIVVHYHRVVPFTPVKREQPK AVKQDEQKPKRQASQWAVKPTAVGVHVPLPNKQEAPKPAQSVPQQSLEEKATLTFGLFFSKGGGDES VILRKGKLFNRALNVPINVKNTFVWAKIWDEASRRRGYFYVKDSIVKFFPIVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFS Subject 514 GTVSALRGDGKKVLMEARTSTSAVSDASSYDAVFEAVTHALIVVHYHRVVPFTPVKREQPKPAVKQDEQKPKRQASQWAVKPTAVGVHVPLPNKQEAPKPAQSVPQQSLEEKATLTFGLFFSKGGGDESDAVILRKGKLFNRALNVPINVKNTFVWAKIWDEASRRRGYFYVKDSIVKFFPIVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFS 1254
Range 2: 513 to 1253 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
511.1 bits(1109) | 0.0 | 240/247(97%) | 0/247(0%) | Minus/Minus |
Query 28 EKEDEKQRRXXXXXXXXXXLNQHHPLVVLTNALSRMLHNSIRGKATSHPGAVFTMKSSIVALPRTIGKNLTMLSLT*KYPLLREASSQILAQTKVFLTLIGTLRALLNNFPFRKMTXXXXXXXXXLKKRPNVRVAFSSNDCCGTDCAGFGASCLFGSGTWTPTAVGLTAHCDACRLGFCSSCLTARLGCSRLTGVNGTTRW*CTTINACVTASNTAS*LDASETAEVEVLASIKTFLPSPLTTQTHP 768 EKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNALSRMLHNSIRGKATSHPGAVFTMKSSIVALPRTIGKNLTMLSLT*KYPLLREASSQILAQTKVFLTLIGTLRALLNNFPFRKMT LSSPPPLLKKRPNVRVAFSSNDCCGTDCAGFGASCLFGSGTWTPTAVGLTAHCDACRLGFCSSCLTA LGCSRLTGVNGTTRW*CTTINACVTASNTAS*LDASETAEVEVLASIKTFLPSPL T P Subject 513 EKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNALSRMLHNSIRGKATSHPGAVFTMKSSIVALPRTIGKNLTMLSLT*KYPLLREASSQILAQTKVFLTLIGTLRALLNNFPFRKMTASLSSPPPLLKKRPNVRVAFSSNDCCGTDCAGFGASCLFGSGTWTPTAVGLTAHCDACRLGFCSSCLTAGLGCSRLTGVNGTTRW*CTTINACVTASNTAS*LDASETAEVEVLASIKTFLPSPLNALTVP 1253
Range 3: 850 to 1254 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
328.2 bits(710) | 0.0 | 132/135(98%) | 0/135(0%) | Minus/Minus |
Query 365 RKGR*EATTSVNFSPQPLIVKPTPPFGSAHERPFAHAPQLYTW*GNITPWGRIHNEIFNCSPTPHDREELNNAILDIKISSPTRGFIPNFGPNKGVLNIDRNVKSPVEQLPFPQDDAAALIAPTFTEEKAKRQSG 769 RKGR*EATTSVNFSPQPLIVKPTPPFGSAHERPFAHAPQLYTW*GNITPWGRIHNEIFNCSPTPHDREELNNAILDIKISSPTRGFIPNFGPNKGVLNIDRNVKSPVEQ PFPQDD ALIAPTFTEEKAKRQSG Subject 850 RKGR*EATTSVNFSPQPLIVKPTPPFGSAHERPFAHAPQLYTW*GNITPWGRIHNEIFNCSPTPHDREELNNAILDIKISSPTRGFIPNFGPNKGVLNIDRNVKSPVEQFPFPQDDGVALIAPTFTEEKAKRQSG 1254
Range 4: 520 to 792 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
175.2 bits(376) | 0.0 | 84/91(92%) | 0/91(0%) | Minus/Minus |
Query 35 IRKWYMDANSCWLNSPXXXXXXXXXXXLFDSPFRLLALDRGKRHYPVVVYNNQRMCYSFKHGVVTRRVGNCRS*GPRLHQNLLTIPPHYPN 307 IRKWYMDANSCWLNSPL*RLPFGLLLILFDS FRLLALD GKRHYPVVVYNNQRMCYSFK+GVVTRRVGNCRS*GPRLHQNLLTIP N Subject 520 IRKWYMDANSCWLNSPL*RLPFGLLLILFDSRFRLLALDGGKRHYPVVVYNNQRMCYSFKYGVVTRRVGNCRS*GPRLHQNLLTIPSQCTN 792
Range 5: 626 to 1252 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
466.1 bits(1011) | 0.0 | 207/209(99%) | 0/209(0%) | Minus/Minus |
Query 141 KRKMRSNDVCKFLPSASHC*TNTTLW*CSRTPFRACSTTLYVVRQHHTLGPYSQ*NLQL*PYPAR*GRT*QCYP*HKNILSYERLHPKFWPKQRCS*H**ER*EPC*TTSLSAXXXXRSHRPHLY*RKGQTSEWPSPPTTVVEQIALVLVLPAYSEVVHGRQQLLA*QPIVTLAVWASAHLV*QPV*AARA*QG*TALPGGSVQQSTHV 767 KRKMRSNDVCKFLPSASHC*TNTTLW*CSRTPFRACSTTLYVVRQHHTLGPYSQ*NLQL*PYPAR*GRT*QCYP*HKNILSYERLHPKFWPKQRCS*H**ER*EPC*T SLSAR*RRRSHRPHLY*RKGQTSEWPSPPTTVVEQIALVLVLPAYSEVVHGRQQLLA*QPIVTLAVWASAHLV*QPV*AARA*+G*TALPGGSVQQSTHV Subject 626 KRKMRSNDVCKFLPSASHC*TNTTLW*CSRTPFRACSTTLYVVRQHHTLGPYSQ*NLQL*PYPAR*GRT*QCYP*HKNILSYERLHPKFWPKQRCS*H**ER*EPC*TISLSAR*RRRSHRPHLY*RKGQTSEWPSPPTTVVEQIALVLVLPAYSEVVHGRQQLLA*QPIVTLAVWASAHLV*QPV*AARA*RG*TALPGGSVQQSTHV 1252
Range 6: 554 to 1252 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
452.9 bits(982) | 0.0 | 227/233(97%) | 0/233(0%) | Plus/Plus |
Query 69 *WRRGPQLLQFPTRLVTTPCLKL*HMR*LLYTTTG*CRXXXXXXXXXXXXXNKMSRSPNGKRHNGLLSQQLLASMYHFRISRKHQNQRNLFHNSRWRRRPL*RLAFSSVKVGAMRXXXXXXXXXXXXTGLLTFLSMLRTPLFGPKFGMKPLVGEDIFMSRIAXXXXXXXCGVGLQLKISL*IRPQGVMLPYHV*SCGACAKGRS*ALPKGGVGLTMRG*GEKFTDVVASHLPF 767 *WRRGPQLLQFPTRLVTTP LKL*HMR*LLYTTTG*CRLP SSASSLN LSNKMSRSPNGKRHNGLLSQQLLASMYHFRISRKHQNQRNLFHNSRWRRRPL*RLAFSSVKVGAMRA SSCGKG+CSTGLLTFLSMLRTPLFGPKFGMKPLVGEDIFMSRIALLSSSLSCGVGLQLKISL*IRPQGVMLPYHV*SCGACAKGRS*ALPKGGVGLTMRG*GEKFTDVVASHLPF Subject 554 *WRRGPQLLQFPTRLVTTPYLKL*HMR*LLYTTTG*CRLPPSSASSLNRLSNKMSRSPNGKRHNGLLSQQLLASMYHFRISRKHQNQRNLFHNSRWRRRPL*RLAFSSVKVGAMRATPSSCGKGNCSTGLLTFLSMLRTPLFGPKFGMKPLVGEDIFMSRIALLSSSLSCGVGLQLKISL*IRPQGVMLPYHV*SCGACAKGRS*ALPKGGVGLTMRG*GEKFTDVVASHLPF 1252
Range 7: 927 to 1253 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
251.2 bits(542) | 0.0 | 108/109(99%) | 0/109(0%) | Plus/Plus |
Query 442 VVQQGS*RSYQC*EHLCLGQNLG*SLS*ERIFLCQG*HC*VLPYRAG*GYN*RFHCEYGPRV*CCLTTYRVVEHARKGVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLF 768 +VQQGS*RSYQC*EHLCLGQNLG*SLS*ERIFLCQG*HC*VLPYRAG*GYN*RFHCEYGPRV*CCLTTYRVVEHARKGVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLF Subject 927 IVQQGS*RSYQC*EHLCLGQNLG*SLS*ERIFLCQG*HC*VLPYRAG*GYN*RFHCEYGPRV*CCLTTYRVVEHARKGVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLF 1253
Range 8: 618 to 878 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
212.8 bits(458) | 0.0 | 86/87(99%) | 0/87(0%) | Plus/Plus |
Query 133 SCNTCVDCCTLPPGSAVYPCQARAA*TGCQTR*AEAQTASVTMGC*ANSCWRPCTTSE*AGSTKTSAICSTTVVGGEGHSDVWPFLQ 393 SCNTCVDCCTLPPGSAVYP QARAA*TGCQTR*AEAQTASVTMGC*ANSCWRPCTTSE*AGSTKTSAICSTTVVGGEGHSDVWPFLQ Subject 618 SCNTCVDCCTLPPGSAVYPRQARAA*TGCQTR*AEAQTASVTMGC*ANSCWRPCTTSE*AGSTKTSAICSTTVVGGEGHSDVWPFLQ 878
Grapevine leafroll associated virus 3, complete genome
Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 8
Range 1: 996 to 1736 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
533.5 bits(1158) | 0.0 | 238/247(96%) | 0/247(0%) | Plus/Plus |
Query 29 GCVWVVRGDGKKVLMEARXXXXXXXXXXXXXXXFEAVTHALIVVHYHRVVPFTPVKREQPKRAVKQDEQKPKRQASQWAVKPTAVGVHVPLPNKQEAPKPAQSVPQQSLEEKATLTFGLFFSKGGGDESGGVILRKGKLFNRALNVPINVKNTFVWAKIWDEASRRRGYFYVKDSIVKFFPIVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFS 769 G V +RGDGK+VLMEARTSTSAVSDASSYDAVFEAVT+ALIVVHYHRVVPFTPVKREQPK AVKQDEQKPKRQASQWAVKPTAVGVHVPLPNKQEAPKPAQSVPQQSLEEKATLTFGLFFSKGGGDES VILRKGKLFNRALNVPINVKNTFVWAKIWDEASRRRGYFYVKDSIVKFFPIVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFS Subject 996 GTVSALRGDGKRVLMEARTSTSAVSDASSYDAVFEAVTNALIVVHYHRVVPFTPVKREQPKPAVKQDEQKPKRQASQWAVKPTAVGVHVPLPNKQEAPKPAQSVPQQSLEEKATLTFGLFFSKGGGDESDAVILRKGKLFNRALNVPINVKNTFVWAKIWDEASRRRGYFYVKDSIVKFFPIVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFS 1736
Range 2: 995 to 1735 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
503.3 bits(1092) | 0.0 | 238/247(96%) | 0/247(0%) | Minus/Minus |
Query 28 EKEDEKQRRXXXXXXXXXXLNQHHPLVVLTNALSRMLHNSIRGKATSHPGAVFTMKSSIVALPRTIGKNLTMLSLT*KYPLLREASSQILAQTKVFLTLIGTLRALLNNFPFRKMTXXXXXXXXXLKKRPNVRVAFSSNDCCGTDCAGFGASCLFGSGTWTPTAVGLTAHCDACRLGFCSSCLTARLGCSRLTGVNGTTRW*CTTINACVTASNTAS*LDASETAEVEVLASIKTFLPSPLTTQTHP 768 EKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNALSRMLHNSIRGKATSHPGAVFTMKSSIVALPRTIGKNLTMLSLT*KYPLLREASSQILAQTKVFLTLIGTLRALLNNFPFRKMT LSSPPPLLKKRPNVRVAFSSNDCCGTDCAGFGASCLFGSGTWTPTAVGLTAHCDACRLGFCSSCLTA LGCSRLTGVNGTTRW*CTTINA VTASNTAS*LDASETAEVEVLASIKT LPSPL T P Subject 995 EKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNALSRMLHNSIRGKATSHPGAVFTMKSSIVALPRTIGKNLTMLSLT*KYPLLREASSQILAQTKVFLTLIGTLRALLNNFPFRKMTASLSSPPPLLKKRPNVRVAFSSNDCCGTDCAGFGASCLFGSGTWTPTAVGLTAHCDACRLGFCSSCLTAGLGCSRLTGVNGTTRW*CTTINAFVTASNTAS*LDASETAEVEVLASIKTLLPSPLNALTVP 1735
Range 3: 1332 to 1736 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
325.9 bits(705) | 0.0 | 131/135(97%) | 0/135(0%) | Minus/Minus |
Query 365 RKGR*EATTSVNFSPQPLIVKPTPPFGSAHERPFAHAPQLYTW*GNITPWGRIHNEIFNCSPTPHDREELNNAILDIKISSPTRGFIPNFGPNKGVLNIDRNVKSPVEQLPFPQDDAAALIAPTFTEEKAKRQSG 769 RKGR*EATTSVNFSPQPLIVKPTPPFGSAHERPFAHAPQLYTW*GNITPWGRIHNEIFNCSPTPHDREELNNAILDIKISSPTRGFIP+FGPNKGVLNIDRNVKSPVEQ PFPQDD ALIAPTFTEEKAKRQSG Subject 1332 RKGR*EATTSVNFSPQPLIVKPTPPFGSAHERPFAHAPQLYTW*GNITPWGRIHNEIFNCSPTPHDREELNNAILDIKISSPTRGFIPDFGPNKGVLNIDRNVKSPVEQFPFPQDDGVALIAPTFTEEKAKRQSG 1736
Range 4: 1002 to 1274 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
167.4 bits(359) | 0.0 | 81/91(89%) | 0/91(0%) | Minus/Minus |
Query 35 IRKWYMDANSCWLNSPXXXXXXXXXXXLFDSPFRLLALDRGKRHYPVVVYNNQRMCYSFKHGVVTRRVGNCRS*GPRLHQNLLTIPPHYPN 307 IRKWYMDANSCWLNSPL*RLPFGLLLILFDS FRLLALD GKRHYPVVVYNNQR+CYSFK+ VVTRRVGNCRS*GPRLHQN LTIP N Subject 1002 IRKWYMDANSCWLNSPL*RLPFGLLLILFDSRFRLLALDGGKRHYPVVVYNNQRICYSFKYSVVTRRVGNCRS*GPRLHQNPLTIPSQCTN 1274
Range 5: 1108 to 1734 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
463.4 bits(1005) | 0.0 | 205/209(98%) | 0/209(0%) | Minus/Minus |
Query 141 KRKMRSNDVCKFLPSASHC*TNTTLW*CSRTPFRACSTTLYVVRQHHTLGPYSQ*NLQL*PYPAR*GRT*QCYP*HKNILSYERLHPKFWPKQRCS*H**ER*EPC*TTSLSAXXXXRSHRPHLY*RKGQTSEWPSPPTTVVEQIALVLVLPAYSEVVHGRQQLLA*QPIVTLAVWASAHLV*QPV*AARA*QG*TALPGGSVQQSTHV 767 KRKMRSNDVCKFLPSASHC*TNTTLW*CSRTPFRACSTTLYVVRQHHTLGPYSQ*NLQL*PYPAR*GRT*QCYP*HKNILSYERLHP+FWPKQRCS*H**ER*EPC*T SLSAR*RRRSHRPHLY*RKGQTSEWPSPPTTVVEQIALVLVLPAYSEVVHGRQQLLA*QPIVTLAVWASAHLV*QPV*AARA*+G*TALPGGSVQQSTH+ Subject 1108 KRKMRSNDVCKFLPSASHC*TNTTLW*CSRTPFRACSTTLYVVRQHHTLGPYSQ*NLQL*PYPAR*GRT*QCYP*HKNILSYERLHPRFWPKQRCS*H**ER*EPC*TISLSAR*RRRSHRPHLY*RKGQTSEWPSPPTTVVEQIALVLVLPAYSEVVHGRQQLLA*QPIVTLAVWASAHLV*QPV*AARA*RG*TALPGGSVQQSTHL 1734
Range 6: 1036 to 1734 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
440.9 bits(956) | 0.0 | 224/233(96%) | 0/233(0%) | Plus/Plus |
Query 69 *WRRGPQLLQFPTRLVTTPCLKL*HMR*LLYTTTG*CRXXXXXXXXXXXXXNKMSRSPNGKRHNGLLSQQLLASMYHFRISRKHQNQRNLFHNSRWRRRPL*RLAFSSVKVGAMRXXXXXXXXXXXXTGLLTFLSMLRTPLFGPKFGMKPLVGEDIFMSRIAXXXXXXXCGVGLQLKISL*IRPQGVMLPYHV*SCGACAKGRS*ALPKGGVGLTMRG*GEKFTDVVASHLPF 767 *WRRGPQLLQFPTRLVTT LKL* MR*LLYTTTG*CRLP SSASSLN LSNKMSRSPNGKRHNGLLSQQLLASMYHFRISRKHQNQRNLFHNSRWRRRPL*RLAFSSVKVGAMRA SSCGKG+CSTGLLTFLSMLRTPLFGPK GMKPLVGEDIFMSRIALLSSSLSCGVGLQLKISL*IRPQGVMLPYHV*SCGACAKGRS*ALPKGGVGLTMRG*GEKFTDVVASHLPF Subject 1036 *WRRGPQLLQFPTRLVTTLYLKL*QMR*LLYTTTG*CRLPPSSASSLNRLSNKMSRSPNGKRHNGLLSQQLLASMYHFRISRKHQNQRNLFHNSRWRRRPL*RLAFSSVKVGAMRATPSSCGKGNCSTGLLTFLSMLRTPLFGPKSGMKPLVGEDIFMSRIALLSSSLSCGVGLQLKISL*IRPQGVMLPYHV*SCGACAKGRS*ALPKGGVGLTMRG*GEKFTDVVASHLPF 1734
Range 7: 1409 to 1735 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
251.2 bits(542) | 0.0 | 108/109(99%) | 0/109(0%) | Plus/Plus |
Query 442 VVQQGS*RSYQC*EHLCLGQNLG*SLS*ERIFLCQG*HC*VLPYRAG*GYN*RFHCEYGPRV*CCLTTYRVVEHARKGVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLF 768 +VQQGS*RSYQC*EHLCLGQNLG*SLS*ERIFLCQG*HC*VLPYRAG*GYN*RFHCEYGPRV*CCLTTYRVVEHARKGVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLF Subject 1409 IVQQGS*RSYQC*EHLCLGQNLG*SLS*ERIFLCQG*HC*VLPYRAG*GYN*RFHCEYGPRV*CCLTTYRVVEHARKGVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLF 1735
Range 8: 1100 to 1360 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
210.0 bits(452) | 0.0 | 85/87(98%) | 0/87(0%) | Plus/Plus |
Query 133 SCNTCVDCCTLPPGSAVYPCQARAA*TGCQTR*AEAQTASVTMGC*ANSCWRPCTTSE*AGSTKTSAICSTTVVGGEGHSDVWPFLQ 393 SCN CVDCCTLPPGSAVYP QARAA*TGCQTR*AEAQTASVTMGC*ANSCWRPCTTSE*AGSTKTSAICSTTVVGGEGHSDVWPFLQ Subject 1100 SCNKCVDCCTLPPGSAVYPRQARAA*TGCQTR*AEAQTASVTMGC*ANSCWRPCTTSE*AGSTKTSAICSTTVVGGEGHSDVWPFLQ 1360
Grapevine leafroll associated virus 3 isolate GP18, complete genome
Sequence ID: EU259806.1 Length: 18498 Number of Matches: 8
Range 1: 996 to 1736 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
533.5 bits(1158) | 0.0 | 236/247(96%) | 0/247(0%) | Plus/Plus |
Query 29 GCVWVVRGDGKKVLMEARXXXXXXXXXXXXXXXFEAVTHALIVVHYHRVVPFTPVKREQPKRAVKQDEQKPKRQASQWAVKPTAVGVHVPLPNKQEAPKPAQSVPQQSLEEKATLTFGLFFSKGGGDESGGVILRKGKLFNRALNVPINVKNTFVWAKIWDEASRRRGYFYVKDSIVKFFPIVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFS 769 G V +RGDGK+VLMEARTSTSA SDASSYDAVFEAVTHALIVVHYHRVVPFTPV+REQPK AVKQDEQKPKRQ SQWAVKPTAVGVHVPLPNKQEAPKPAQSVPQQSLEEKATLTFGLFFSKGGGDES VILRKGKLFNRALNVPINVKNTFVWAKIWDEASRRRGYFYVKDSIVKFFPIVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFS Subject 996 GTVSALRGDGKRVLMEARTSTSAFSDASSYDAVFEAVTHALIVVHYHRVVPFTPVRREQPKPAVKQDEQKPKRQVSQWAVKPTAVGVHVPLPNKQEAPKPAQSVPQQSLEEKATLTFGLFFSKGGGDESDAVILRKGKLFNRALNVPINVKNTFVWAKIWDEASRRRGYFYVKDSIVKFFPIVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFS 1736
Range 2: 995 to 1735 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
504.2 bits(1094) | 0.0 | 237/247(96%) | 0/247(0%) | Minus/Minus |
Query 28 EKEDEKQRRXXXXXXXXXXLNQHHPLVVLTNALSRMLHNSIRGKATSHPGAVFTMKSSIVALPRTIGKNLTMLSLT*KYPLLREASSQILAQTKVFLTLIGTLRALLNNFPFRKMTXXXXXXXXXLKKRPNVRVAFSSNDCCGTDCAGFGASCLFGSGTWTPTAVGLTAHCDACRLGFCSSCLTARLGCSRLTGVNGTTRW*CTTINACVTASNTAS*LDASETAEVEVLASIKTFLPSPLTTQTHP 768 EKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNALSRMLHNSIRGKATSHPGAVFTMKSSIVALPRTIGKNLTMLSLT*KYPLLREASSQILAQTKVFLTLIGTLRALLNNFPFRKMT LSSPPPLLKKRPNVRVAFSSNDCCGTDCAGFGASCLFGSGTWTPTAVGLTAHCD CRLGFCSSCLTA LGCSRLTGVNGTTRW*CTTINACVTASNTAS*LDASE AEVEVLASIKT LPSPL T P Subject 995 EKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNALSRMLHNSIRGKATSHPGAVFTMKSSIVALPRTIGKNLTMLSLT*KYPLLREASSQILAQTKVFLTLIGTLRALLNNFPFRKMTASLSSPPPLLKKRPNVRVAFSSNDCCGTDCAGFGASCLFGSGTWTPTAVGLTAHCDTCRLGFCSSCLTAGLGCSRLTGVNGTTRW*CTTINACVTASNTAS*LDASENAEVEVLASIKTLLPSPLNALTVP 1735
Range 3: 1332 to 1736 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
322.7 bits(698) | 0.0 | 129/135(96%) | 0/135(0%) | Minus/Minus |
Query 365 RKGR*EATTSVNFSPQPLIVKPTPPFGSAHERPFAHAPQLYTW*GNITPWGRIHNEIFNCSPTPHDREELNNAILDIKISSPTRGFIPNFGPNKGVLNIDRNVKSPVEQLPFPQDDAAALIAPTFTEEKAKRQSG 769 RKGR*EATTSVNFSPQPLIVKPTPPFGSAHERPFAHAPQLYTW*GNITPWGRIHNEIFNCSPTPHDREELNNAILD+KISSPTRGFIP+FGPNKGVLNIDRNVKSPVEQ P PQDD ALIAPTFTEEKAKRQSG Subject 1332 RKGR*EATTSVNFSPQPLIVKPTPPFGSAHERPFAHAPQLYTW*GNITPWGRIHNEIFNCSPTPHDREELNNAILDVKISSPTRGFIPDFGPNKGVLNIDRNVKSPVEQFPLPQDDGVALIAPTFTEEKAKRQSG 1736
Range 4: 1002 to 1274 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
166.0 bits(356) | 0.0 | 80/91(88%) | 0/91(0%) | Minus/Minus |
Query 35 IRKWYMDANSCWLNSPXXXXXXXXXXXLFDSPFRLLALDRGKRHYPVVVYNNQRMCYSFKHGVVTRRVGNCRS*GPRLHQNLLTIPPHYPN 307 IRKWYMDANSCWLNSPL* LPFGLLLILFDS FRLLA D GKRHYPVVVYNNQRMCYSFK+GVVTRRVG CRS*GPRLHQN LTIP N Subject 1002 IRKWYMDANSCWLNSPL*HLPFGLLLILFDSRFRLLAPDGGKRHYPVVVYNNQRMCYSFKYGVVTRRVGKCRS*GPRLHQNPLTIPSQCTN 1274
Range 5: 1108 to 1734 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
457.9 bits(993) | 0.0 | 204/209(98%) | 0/209(0%) | Minus/Minus |
Query 141 KRKMRSNDVCKFLPSASHC*TNTTLW*CSRTPFRACSTTLYVVRQHHTLGPYSQ*NLQL*PYPAR*GRT*QCYP*HKNILSYERLHPKFWPKQRCS*H**ER*EPC*TTSLSAXXXXRSHRPHLY*RKGQTSEWPSPPTTVVEQIALVLVLPAYSEVVHGRQQLLA*QPIVTLAVWASAHLV*QPV*AARA*QG*TALPGGSVQQSTHV 767 KRKMRSNDVCKFLPSASHC*TNTTLW*CSRTPFRACSTTLYVVRQHHTLGPYSQ*NLQL*PYPAR*GRT*QCYP* KNILSYERLHP+FWPKQRCS*H**ER*EPC*T S SAR*RRRSHRPHLY*RKGQTSEWPSPPTTVVEQIALVLVLPAYSEVVHGRQQLLA*QPIVTLAVWASAHLV*QPV*AARA*+G*TALPGGSVQQSTHV Subject 1108 KRKMRSNDVCKFLPSASHC*TNTTLW*CSRTPFRACSTTLYVVRQHHTLGPYSQ*NLQL*PYPAR*GRT*QCYP*RKNILSYERLHPRFWPKQRCS*H**ER*EPC*TISPSAR*RRRSHRPHLY*RKGQTSEWPSPPTTVVEQIALVLVLPAYSEVVHGRQQLLA*QPIVTLAVWASAHLV*QPV*AARA*RG*TALPGGSVQQSTHV 1734
Range 6: 1036 to 1734 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
440.5 bits(955) | 0.0 | 221/233(95%) | 0/233(0%) | Plus/Plus |
Query 69 *WRRGPQLLQFPTRLVTTPCLKL*HMR*LLYTTTG*CRXXXXXXXXXXXXXNKMSRSPNGKRHNGLLSQQLLASMYHFRISRKHQNQRNLFHNSRWRRRPL*RLAFSSVKVGAMRXXXXXXXXXXXXTGLLTFLSMLRTPLFGPKFGMKPLVGEDIFMSRIAXXXXXXXCGVGLQLKISL*IRPQGVMLPYHV*SCGACAKGRS*ALPKGGVGLTMRG*GEKFTDVVASHLPF 767 *WRRGPQLL FPTRLVTTP LKL*HMR*LLYTTTG*CRLP S ASSLN LSNKMSRSPNGK HNGLLSQQLLASMYHFRISRKHQNQRNLFHNSRWRRRPL*RLAFSSVKVGAMRA SSCG+G+CSTGLLTFLSMLRTPLFGPK GMKPLVGEDIF SRIALLSSSLSCGVGLQLKISL*IRPQGVMLPYHV*SCGACAKGRS*ALPKGGVGLTMRG*GEKFTDVVASHLPF Subject 1036 *WRRGPQLLHFPTRLVTTPYLKL*HMR*LLYTTTG*CRLPPSGASSLNRLSNKMSRSPNGKCHNGLLSQQLLASMYHFRISRKHQNQRNLFHNSRWRRRPL*RLAFSSVKVGAMRATPSSCGRGNCSTGLLTFLSMLRTPLFGPKSGMKPLVGEDIFTSRIALLSSSLSCGVGLQLKISL*IRPQGVMLPYHV*SCGACAKGRS*ALPKGGVGLTMRG*GEKFTDVVASHLPF 1734
Range 7: 1409 to 1735 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
245.8 bits(530) | 0.0 | 107/109(98%) | 0/109(0%) | Plus/Plus |
Query 442 VVQQGS*RSYQC*EHLCLGQNLG*SLS*ERIFLCQG*HC*VLPYRAG*GYN*RFHCEYGPRV*CCLTTYRVVEHARKGVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLF 768 +VQQGS*RSYQC*EHLCLGQNLG*SLS*ERIFL QG*HC*VLPYRAG*GYN*RFHCEYGPRV*CCLTTYRVVEHARKGVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLF Subject 1409 IVQQGS*RSYQC*EHLCLGQNLG*SLS*ERIFLRQG*HC*VLPYRAG*GYN*RFHCEYGPRV*CCLTTYRVVEHARKGVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLF 1735
Range 8: 1100 to 1360 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
212.8 bits(458) | 0.0 | 86/87(99%) | 0/87(0%) | Plus/Plus |
Query 133 SCNTCVDCCTLPPGSAVYPCQARAA*TGCQTR*AEAQTASVTMGC*ANSCWRPCTTSE*AGSTKTSAICSTTVVGGEGHSDVWPFLQ 393 SCNTCVDCCTLPPGSAVYP QARAA*TGCQTR*AEAQTASVTMGC*ANSCWRPCTTSE*AGSTKTSAICSTTVVGGEGHSDVWPFLQ Subject 1100 SCNTCVDCCTLPPGSAVYPRQARAA*TGCQTR*AEAQTASVTMGC*ANSCWRPCTTSE*AGSTKTSAICSTTVVGGEGHSDVWPFLQ 1360
Grapevine leafroll associated virus 3 isolate 623, complete genome
Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 8
Range 1: 996 to 1736 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
531.7 bits(1154) | 0.0 | 236/247(96%) | 0/247(0%) | Plus/Plus |
Query 29 GCVWVVRGDGKKVLMEARXXXXXXXXXXXXXXXFEAVTHALIVVHYHRVVPFTPVKREQPKRAVKQDEQKPKRQASQWAVKPTAVGVHVPLPNKQEAPKPAQSVPQQSLEEKATLTFGLFFSKGGGDESGGVILRKGKLFNRALNVPINVKNTFVWAKIWDEASRRRGYFYVKDSIVKFFPIVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFS 769 G V +RGDGKKVLMEARTSTSA SDASSYDAVFEAVTHALIVVHYHRVVPFTPVKREQPK AVKQDEQKPKRQ SQWAVKPTAVGVHVPLPNKQEAPKPA+SVPQQSLEEKATLTFGLFFSKGGGDES VILRKGKLFNRALNVPI VKNTFVWAKIWDEASRRRGYFYVKDSIVKFFPIVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFS Subject 996 GTVSALRGDGKKVLMEARTSTSASSDASSYDAVFEAVTHALIVVHYHRVVPFTPVKREQPKPAVKQDEQKPKRQVSQWAVKPTAVGVHVPLPNKQEAPKPARSVPQQSLEEKATLTFGLFFSKGGGDESDAVILRKGKLFNRALNVPIKVKNTFVWAKIWDEASRRRGYFYVKDSIVKFFPIVRGRATIEDFIVNTAPGCDVALPRIELWSMRERAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFS 1736
Range 2: 995 to 1735 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
501.0 bits(1087) | 0.0 | 237/247(96%) | 0/247(0%) | Minus/Minus |
Query 28 EKEDEKQRRXXXXXXXXXXLNQHHPLVVLTNALSRMLHNSIRGKATSHPGAVFTMKSSIVALPRTIGKNLTMLSLT*KYPLLREASSQILAQTKVFLTLIGTLRALLNNFPFRKMTXXXXXXXXXLKKRPNVRVAFSSNDCCGTDCAGFGASCLFGSGTWTPTAVGLTAHCDACRLGFCSSCLTARLGCSRLTGVNGTTRW*CTTINACVTASNTAS*LDASETAEVEVLASIKTFLPSPLTTQTHP 768 EKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNALSRMLHNSIRGKATSHPGAVFTMKSSIVALPRTIGKNLTMLSLT*KYPLLREASSQILAQTKVFLTLIGTLRALLNNFPFRKMT LSSPPPLLKKRPNVRVAFSSNDCCGTD AGFGASCLFGSGTWTPTAVGLTAHCD CRLGFCSSCLTA LGCSRLTGVNGTTRW*CTTINACVTASNTAS*LDASE AEVEVLASIKTFLPSPL T P Subject 995 EKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNALSRMLHNSIRGKATSHPGAVFTMKSSIVALPRTIGKNLTMLSLT*KYPLLREASSQILAQTKVFLTLIGTLRALLNNFPFRKMTASLSSPPPLLKKRPNVRVAFSSNDCCGTDRAGFGASCLFGSGTWTPTAVGLTAHCDTCRLGFCSSCLTAGLGCSRLTGVNGTTRW*CTTINACVTASNTAS*LDASEDAEVEVLASIKTFLPSPLNALTVP 1735
Range 3: 1332 to 1736 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
317.7 bits(687) | 0.0 | 129/135(96%) | 0/135(0%) | Minus/Minus |
Query 365 RKGR*EATTSVNFSPQPLIVKPTPPFGSAHERPFAHAPQLYTW*GNITPWGRIHNEIFNCSPTPHDREELNNAILDIKISSPTRGFIPNFGPNKGVLNIDRNVKSPVEQLPFPQDDAAALIAPTFTEEKAKRQSG 769 RKGR*EATTSVNFSPQPLIVKPTPPFGSAHERPFAHAPQLYT *GNITPWGRIHNEIFNCSPTPHDREELNNAILDIKISSPTRGFIP+FGPNKGVLN DRNVKSPVEQ PFPQDD ALIAPTFTEEKAKRQSG Subject 1332 RKGR*EATTSVNFSPQPLIVKPTPPFGSAHERPFAHAPQLYTR*GNITPWGRIHNEIFNCSPTPHDREELNNAILDIKISSPTRGFIPDFGPNKGVLNFDRNVKSPVEQFPFPQDDGVALIAPTFTEEKAKRQSG 1736
Range 4: 1002 to 1274 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
172.4 bits(370) | 0.0 | 82/91(90%) | 0/91(0%) | Minus/Minus |
Query 35 IRKWYMDANSCWLNSPXXXXXXXXXXXLFDSPFRLLALDRGKRHYPVVVYNNQRMCYSFKHGVVTRRVGNCRS*GPRLHQNLLTIPPHYPN 307 IRKWYMDANSCWLNSPL* LPFGLLLILFDS FRLLALD GKRHYPVVVYNNQRMCYSFK+GVVTRRVG CRS*GPRLHQNLLTIP N Subject 1002 IRKWYMDANSCWLNSPL*HLPFGLLLILFDSRFRLLALDGGKRHYPVVVYNNQRMCYSFKYGVVTRRVGRCRS*GPRLHQNLLTIPSQCTN 1274
Range 5: 1108 to 1734 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
457.9 bits(993) | 0.0 | 204/209(98%) | 0/209(0%) | Minus/Minus |
Query 141 KRKMRSNDVCKFLPSASHC*TNTTLW*CSRTPFRACSTTLYVVRQHHTLGPYSQ*NLQL*PYPAR*GRT*QCYP*HKNILSYERLHPKFWPKQRCS*H**ER*EPC*TTSLSAXXXXRSHRPHLY*RKGQTSEWPSPPTTVVEQIALVLVLPAYSEVVHGRQQLLA*QPIVTLAVWASAHLV*QPV*AARA*QG*TALPGGSVQQSTHV 767 KRKMRSNDVCKFLPSASHC*TNTTLW*CSRTPFRACSTTLY VRQHHTLGPYSQ*NLQL*PYPAR*GRT*QCYP*HKNILSYERLHP+FWPKQRCS* **ER*EPC*T SLSAR*RRRSHRPHLY*RKGQTSEWPSPPTTVVEQIALVLVLPAYSEVVHGRQQLLA*QPIVTLAVWASAHLV*QPV*AARA*+G*TALPGGSVQQSTHV Subject 1108 KRKMRSNDVCKFLPSASHC*TNTTLW*CSRTPFRACSTTLYAVRQHHTLGPYSQ*NLQL*PYPAR*GRT*QCYP*HKNILSYERLHPRFWPKQRCS*L**ER*EPC*TISLSAR*RRRSHRPHLY*RKGQTSEWPSPPTTVVEQIALVLVLPAYSEVVHGRQQLLA*QPIVTLAVWASAHLV*QPV*AARA*RG*TALPGGSVQQSTHV 1734
Range 6: 1409 to 1735 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
244.4 bits(527) | 0.0 | 106/109(97%) | 0/109(0%) | Plus/Plus |
Query 442 VVQQGS*RSYQC*EHLCLGQNLG*SLS*ERIFLCQG*HC*VLPYRAG*GYN*RFHCEYGPRV*CCLTTYRVVEHARKGVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLF 768 +VQQGS*RSYQ *EHLCLGQNLG*SLS*ERIFLCQG*HC*VLPYRAG*GYN*RFHCEYGPRV*CCLT YRVVEHARKGVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLF Subject 1409 IVQQGS*RSYQS*EHLCLGQNLG*SLS*ERIFLCQG*HC*VLPYRAG*GYN*RFHCEYGPRV*CCLTAYRVVEHARKGVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLF 1735
Range 7: 1100 to 1360 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
212.8 bits(458) | 0.0 | 86/87(99%) | 0/87(0%) | Plus/Plus |
Query 133 SCNTCVDCCTLPPGSAVYPCQARAA*TGCQTR*AEAQTASVTMGC*ANSCWRPCTTSE*AGSTKTSAICSTTVVGGEGHSDVWPFLQ 393 SCNTCVDCCTLPPGSAVYP QARAA*TGCQTR*AEAQTASVTMGC*ANSCWRPCTTSE*AGSTKTSAICSTTVVGGEGHSDVWPFLQ Subject 1100 SCNTCVDCCTLPPGSAVYPRQARAA*TGCQTR*AEAQTASVTMGC*ANSCWRPCTTSE*AGSTKTSAICSTTVVGGEGHSDVWPFLQ 1360
Range 8: 1036 to 1734 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
431.8 bits(936) | 0.0 | 220/233(94%) | 0/233(0%) | Plus/Plus |
Query 69 *WRRGPQLLQFPTRLVTTPCLKL*HMR*LLYTTTG*CRXXXXXXXXXXXXXNKMSRSPNGKRHNGLLSQQLLASMYHFRISRKHQNQRNLFHNSRWRRRPL*RLAFSSVKVGAMRXXXXXXXXXXXXTGLLTFLSMLRTPLFGPKFGMKPLVGEDIFMSRIAXXXXXXXCGVGLQLKISL*IRPQGVMLPYHV*SCGACAKGRS*ALPKGGVGLTMRG*GEKFTDVVASHLPF 767 *WRRGPQLL PTRLVTTP LKL*HMR*LLYTTTG*CRLP SSASSLN LSNKMSRSPNGK HNGLLSQQLLASMYHFRISRKHQNQR+LFHNSRWRRRPL*RLAFSSVKVGAMRA SSCGKG+CSTGLLTFLS LRTPLFGPK GMKPLVGEDIFMSRIALLSSSLSCGVGLQLKISL*IRPQGVMLPY V*SCGACAKGRS*ALPKGGVGLTMRG*GEKFTDVVASHLPF Subject 1036 *WRRGPQLLHLPTRLVTTPYLKL*HMR*LLYTTTG*CRLPPSSASSLNRLSNKMSRSPNGKCHNGLLSQQLLASMYHFRISRKHQNQRDLFHNSRWRRRPL*RLAFSSVKVGAMRATPSSCGKGNCSTGLLTFLSKLRTPLFGPKSGMKPLVGEDIFMSRIALLSSSLSCGVGLQLKISL*IRPQGVMLPYRV*SCGACAKGRS*ALPKGGVGLTMRG*GEKFTDVVASHLPF 1734
Nucleotide Sequence (822 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
633.9 | 3437.6 | 25% | 8.63e-180 | 97% | KX701860.1 | |
632.0 | 3434.9 | 22% | 3.055e-179 | 97% | GQ352632.1 | |
629.3 | 3426.2 | 22% | 2.034e-178 | 95% | KX756668.1 | |
628.8 | 3106.3 | 22% | 2.79e-178 | 80% | JX559645.1 | |
628.8 | 3102.2 | 22% | 2.79e-178 | 82% | GQ352631.1 |
Alignments
Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome
Sequence ID: KX701860.1 Length: 18020 Number of Matches: 13
Range 1: 10930 to 11748 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
633.9 bits(1384) | 0.0 | 271/273(99%) | 0/273(0%) | Plus/Plus |
Query 3 AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEDVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDNTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGSGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPKETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSN 821 AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVE VDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDNTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGSGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPKETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILH+KAFTRKNLSN Subject 10930 AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDNTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGSGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPKETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHNKAFTRKNLSN 11748
Range 2: 10928 to 11749 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
584.8 bits(1270) | 0.0 | 269/274(98%) | 0/274(0%) | Minus/Minus |
Query 1 CYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSRIYRPTNLVRLLSRVPDIHSLLPHR*Q*QIPYRLWIN*IALRRSLLGLPYVSIRPGTSVHLEKPCYSPLQIYRTPHLHYPLCICECMNRVLDYLSGKLXXXXXXXXXPLAYSSKCPPVSVRYYLPKYHSKP*PHRLPNT*NQYCRTQP*ISAANWLHHS*P*LEHLTPQS*QQ*QGLDKSCQDRF*TLPQP*R*MAQQLRLVRR*SNXXXXXXXLRG*GVAL*RYC*TSLPSSRIRISLTWH 822 CY GFSS*KPY AKYSVWSSTLVLP*PLNLLSRIYRPTNLVRLLSRVPDIHSLLPHR*Q*QIPYRLWIN*IALRRSLLGLPYVSIRPGTSVHLEKPCYSPLQIYRTPHLHYPLCICECMNRVLDYLSGKLPPVESPPPRPLAYSSKCPPVSVRYYLPKYHSKP*PHRLPNT*NQYCRTQP*ISAANW HHS*P*LEHLTPQS*QQ*QGLDKSCQDRF*TLPQP*R*MAQQLRLVRR*SN PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH Subject 10928 CYLGFSS*KPYCAKYSVWSSTLVLP*PLNLLSRIYRPTNLVRLLSRVPDIHSLLPHR*Q*QIPYRLWIN*IALRRSLLGLPYVSIRPGTSVHLEKPCYSPLQIYRTPHLHYPLCICECMNRVLDYLSGKLPPVESPPPRPLAYSSKCPPVSVRYYLPKYHSKP*PHRLPNT*NQYCRTQP*ISAANWPHHS*P*LEHLTPQS*QQ*QGLDKSCQDRF*TLPQP*R*MAQQLRLVRR*SNLQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH 11749
Range 3: 11440 to 11748 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
248.5 bits(536) | 0.0 | 102/103(99%) | 0/103(0%) | Minus/Minus |
Query 513 VTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPGFIDQRI*YVCCPGYQIFILYFLTVNNNRYRTVCG*IKLRYVGLFWVSPTFRYAPERRFI*KSPVILPFKY 821 VT VFPRESLIVQNIQCGQVLWYCLSL*IFSPGFIDQRI*YVCCPGYQIFILYFLTVNNNRYRTVCG*IKLRYVGLFWVSPTFRYAPERRFI*KSPVILPFKY Subject 11440 VT*VFPRESLIVQNIQCGQVLWYCLSL*IFSPGFIDQRI*YVCCPGYQIFILYFLTVNNNRYRTVCG*IKLRYVGLFWVSPTFRYAPERRFI*KSPVILPFKY 11748
Range 4: 11170 to 11388 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
177.9 bits(382) | 0.0 | 72/73(99%) | 0/73(0%) | Minus/Minus |
Query 243 GYWTTFRENYHRLKVHHLVR*RIRQSVHQSQSAITCQNITVNLSPTGYRTPKISIVEHNLRYLRQIGYITPDL 461 GYWTTFRENYHRLKVHHLVR*RIRQSVHQSQSAITCQNITVNLSPTGYRTPKISIVEHNLRYLRQIG+ITPDL Subject 11170 GYWTTFRENYHRLKVHHLVR*RIRQSVHQSQSAITCQNITVNLSPTGYRTPKISIVEHNLRYLRQIGHITPDL 11388
Range 5: 10930 to 11130 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
162.4 bits(348) | 0.0 | 65/67(97%) | 0/67(0%) | Minus/Minus |
Query 3 RVWIKVVKTGFEHFHSPSAEWRNNCV*FVASQIHILHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG 203 RVWIKVVKTGFEHFHSPSAEWRNNCV*FVASQI+ LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG Subject 10930 RVWIKVVKTGFEHFHSPSAEWRNNCV*FVASQIYNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG 11130
Range 6: 11058 to 11747 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
504.2 bits(1094) | 0.0 | 227/230(99%) | 0/230(0%) | Plus/Plus |
Query 131 NCCAIQR*GCGSVQNRS*QLLSRPCYCCYDWGVKCSS*GQE*CSQFAADI*GCVRQY*F*VFGSLWG*GLL*YFGR**RTETGGHFDEYANXXXXXXXXXXNFPER*SNTLFIHSQIHSG*WRCGVRYI*RGE*QGFSK*TDVPGRIET*GRPKRDRRSAI*FIHRRYGICYC*R*GSKE*ISGTRDNKRTRFVGL*IRERRFRG*GNTRVLDHTEYFAR*GFHEEKPE* 820 NCCAIQR*GCGSVQNRS*QLLSRPCYCCYDWGVKCSS*GQE*C QFAADI*GCVRQY*F*VFGSLWG*GLL*YFGR**RTETGGHFDEYANGRGGGLSTGGNFPER*SNTLFIHSQIHSG*WRCGVRYI*RGE*QGFSK*TDVPGRIET*GRPKRDRRSAI*FIHRRYGICYC*R*GSKE*ISGTRDNKRTRFVGL*IRERRFRG*GNTRVLDHTEYFA+*GFHEEKP+* Subject 11058 NCCAIQR*GCGSVQNRS*QLLSRPCYCCYDWGVKCSS*GQE*CGQFAADI*GCVRQY*F*VFGSLWG*GLL*YFGR**RTETGGHFDEYANGRGGGLSTGGNFPER*SNTLFIHSQIHSG*WRCGVRYI*RGE*QGFSK*TDVPGRIET*GRPKRDRRSAI*FIHRRYGICYC*R*GSKE*ISGTRDNKRTRFVGL*IRERRFRG*GNTRVLDHTEYFAQ*GFHEEKPK* 11747
Range 7: 10929 to 11006 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
62.9 bits(131) | 0.0 | 26/26(100%) | 0/26(0%) | Plus/Plus |
Query 2 CQVRDIRILDEGRLV*Q*RYNATPYP 79 CQVRDIRILDEGRLV*Q*RYNATPYP Subject 10929 CQVRDIRILDEGRLV*Q*RYNATPYP 11006
Range 8: 11363 to 11749 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
305.8 bits(661) | 0.0 | 129/129(100%) | 0/129(0%) | Plus/Plus |
Query 436 FSRKVVQYPVHTLTDTQWVVEMWCTVYLKGRITGLF*MNRRSGAYRNVGETQKRPT*RNLIYPQTVRYLLLLTVRK*RMNIWYPGQQTY*IRWSINPGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VT 822 FSRKVVQYPVHTLTDTQWVVEMWCTVYLKGRITGLF*MNRRSGAYRNVGETQKRPT*RNLIYPQTVRYLLLLTVRK*RMNIWYPGQQTY*IRWSINPGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VT Subject 11363 FSRKVVQYPVHTLTDTQWVVEMWCTVYLKGRITGLF*MNRRSGAYRNVGETQKRPT*RNLIYPQTVRYLLLLTVRK*RMNIWYPGQQTY*IRWSINPGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VT 11749
Range 9: 10928 to 11128 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
149.1 bits(319) | 0.0 | 65/67(97%) | 0/67(0%) | Plus/Plus |
Query 1 MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRMWI*LATN*TQLLRHSALGLWKCSKPVLTTFIQT 201 MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWR+ I*LATN*TQLLRHSALGLWKCSKPVLTTFIQT Subject 10928 MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRL*I*LATN*TQLLRHSALGLWKCSKPVLTTFIQT 11128
Range 10: 11171 to 11302 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
100.0 bits(212) | 0.0 | 43/44(98%) | 0/44(0%) | Plus/Plus |
Query 244 RSGVM*PICRRYLRLCSTILILGVR*PVGLRFTVIFWQVIAD*D 375 RSGVM PICRRYLRLCSTILILGVR*PVGLRFTVIFWQVIAD*D Subject 11171 RSGVMWPICRRYLRLCSTILILGVR*PVGLRFTVIFWQVIAD*D 11302
Range 11: 11361 to 11747 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
296.6 bits(641) | 0.0 | 128/129(99%) | 0/129(0%) | Minus/Minus |
Query 434 LLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVDKLNCATSVSFGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPLPTVYL*VYEQGIGLPFGKI 820 LLRFFLVKAL CKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVDKLNCATSVSFGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPLPTVYL*VYEQGIGLPFGKI Subject 11361 LLRFFLVKALLCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVDKLNCATSVSFGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPLPTVYL*VYEQGIGLPFGKI 11747
Range 12: 11055 to 11294 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
147.7 bits(316) | 0.0 | 80/80(100%) | 0/80(0%) | Minus/Minus |
Query 128 PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKXXXXXXXXXXXLDPPVITAITGSG*KLSRPVLNTSTALALNGATIA 367 PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA Subject 11055 PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA 11294
Grapevine leafroll associated virus 3 isolate 623, complete genome
Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 13
Range 1: 11412 to 12230 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
632.0 bits(1380) | 0.0 | 270/273(99%) | 0/273(0%) | Plus/Plus |
Query 3 AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEDVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDNTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGSGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPKETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSN 821 AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVE VDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDNTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVG GDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPKETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILH+KAFTRKNLSN Subject 11412 AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDNTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPKETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHNKAFTRKNLSN 12230
Range 2: 11843 to 12229 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
293.4 bits(634) | 0.0 | 127/129(98%) | 0/129(0%) | Minus/Minus |
Query 434 LLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVDKLNCATSVSFGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPLPTVYL*VYEQGIGLPFGKI 820 LLRFFLVKAL CKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVDKLNCATSVSFGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSP PTVYL*VYEQGIGLPFGKI Subject 11843 LLRFFLVKALLCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVDKLNCATSVSFGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI 12229
Range 3: 11652 to 11870 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
175.2 bits(376) | 0.0 | 71/73(97%) | 0/73(0%) | Minus/Minus |
Query 243 GYWTTFRENYHRLKVHHLVR*RIRQSVHQSQSAITCQNITVNLSPTGYRTPKISIVEHNLRYLRQIGYITPDL 461 GYWTTFRENY+RLKVHHLVR*RIRQSVHQSQSAITCQNITVNLSPTGYRTPKISIVEHNLRYLRQIG+ITPDL Subject 11652 GYWTTFRENYYRLKVHHLVR*RIRQSVHQSQSAITCQNITVNLSPTGYRTPKISIVEHNLRYLRQIGHITPDL 11870
Range 4: 11412 to 11612 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
165.1 bits(354) | 0.0 | 66/67(99%) | 0/67(0%) | Minus/Minus |
Query 3 RVWIKVVKTGFEHFHSPSAEWRNNCV*FVASQIHILHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG 203 RVWIKVVKTGFEHFHSPSAEWRNNCV*FVASQIH LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG Subject 11412 RVWIKVVKTGFEHFHSPSAEWRNNCV*FVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG 11612
Range 5: 11410 to 12231 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
582.5 bits(1265) | 0.0 | 268/274(98%) | 0/274(0%) | Minus/Minus |
Query 1 CYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSRIYRPTNLVRLLSRVPDIHSLLPHR*Q*QIPYRLWIN*IALRRSLLGLPYVSIRPGTSVHLEKPCYSPLQIYRTPHLHYPLCICECMNRVLDYLSGKLXXXXXXXXXPLAYSSKCPPVSVRYYLPKYHSKP*PHRLPNT*NQYCRTQP*ISAANWLHHS*P*LEHLTPQS*QQ*QGLDKSCQDRF*TLPQP*R*MAQQLRLVRR*SNXXXXXXXLRG*GVAL*RYC*TSLPSSRIRISLTWH 822 CY GFSS*KPY AKYSVWSSTLVLP*PLNLLSRIYRPTNLVRLLSRVPDIHSLLPHR*Q*QIPYRLWIN*IALRRSLLGLPYVSIRPGTSVHLEKPCYSPLQIYRTPHLH+PLCICECMNRVLDYLSGKL PVESPPPRPLAYSSKCPPVSVRYYLPKYHSKP*PHRLPNT*NQYCRTQP*ISAANW HHS*P*LEHLTPQS*QQ*QGLDKSCQDRF*TLPQP*R*MAQQLRLVRR*SNP PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH Subject 11410 CYLGFSS*KPYCAKYSVWSSTLVLP*PLNLLSRIYRPTNLVRLLSRVPDIHSLLPHR*Q*QIPYRLWIN*IALRRSLLGLPYVSIRPGTSVHLEKPCYSPLQIYRTPHLHHPLCICECMNRVLDYLSGKLLPVESPPPRPLAYSSKCPPVSVRYYLPKYHSKP*PHRLPNT*NQYCRTQP*ISAANWPHHS*P*LEHLTPQS*QQ*QGLDKSCQDRF*TLPQP*R*MAQQLRLVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH 12231
Range 6: 11540 to 12229 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
501.9 bits(1089) | 0.0 | 225/230(98%) | 0/230(0%) | Plus/Plus |
Query 131 NCCAIQR*GCGSVQNRS*QLLSRPCYCCYDWGVKCSS*GQE*CSQFAADI*GCVRQY*F*VFGSLWG*GLL*YFGR**RTETGGHFDEYANXXXXXXXXXXNFPER*SNTLFIHSQIHSG*WRCGVRYI*RGE*QGFSK*TDVPGRIET*GRPKRDRRSAI*FIHRRYGICYC*R*GSKE*ISGTRDNKRTRFVGL*IRERRFRG*GNTRVLDHTEYFAR*GFHEEKPE* 820 NCCAIQR*GCGSVQNRS*QLLSRPCYCCYDWGVKCSS*GQE*C QFAADI*GCVRQY*F*VFGSLWG*GLL*YFGR**RTETGGHFDEYANGRGGGLSTG NFPER*SNTLFIHSQIHSG WRCGVRYI*RGE*QGFSK*TDVPGRIET*GRPKRDRRSAI*FIHRRYGICYC*R*GSKE*ISGTRDNKRTRFVGL*IRERRFRG*GNTRVLDHTEYFA+*GFHEEKP+* Subject 11540 NCCAIQR*GCGSVQNRS*QLLSRPCYCCYDWGVKCSS*GQE*CGQFAADI*GCVRQY*F*VFGSLWG*GLL*YFGR**RTETGGHFDEYANGRGGGLSTGSNFPER*SNTLFIHSQIHSGWWRCGVRYI*RGE*QGFSK*TDVPGRIET*GRPKRDRRSAI*FIHRRYGICYC*R*GSKE*ISGTRDNKRTRFVGL*IRERRFRG*GNTRVLDHTEYFAQ*GFHEEKPK* 12229
Range 7: 11411 to 11488 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
62.9 bits(131) | 0.0 | 26/26(100%) | 0/26(0%) | Plus/Plus |
Query 2 CQVRDIRILDEGRLV*Q*RYNATPYP 79 CQVRDIRILDEGRLV*Q*RYNATPYP Subject 11411 CQVRDIRILDEGRLV*Q*RYNATPYP 11488
Range 8: 11845 to 12231 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
305.8 bits(661) | 0.0 | 129/129(100%) | 0/129(0%) | Plus/Plus |
Query 436 FSRKVVQYPVHTLTDTQWVVEMWCTVYLKGRITGLF*MNRRSGAYRNVGETQKRPT*RNLIYPQTVRYLLLLTVRK*RMNIWYPGQQTY*IRWSINPGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VT 822 FSRKVVQYPVHTLTDTQWVVEMWCTVYLKGRITGLF*MNRRSGAYRNVGETQKRPT*RNLIYPQTVRYLLLLTVRK*RMNIWYPGQQTY*IRWSINPGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VT Subject 11845 FSRKVVQYPVHTLTDTQWVVEMWCTVYLKGRITGLF*MNRRSGAYRNVGETQKRPT*RNLIYPQTVRYLLLLTVRK*RMNIWYPGQQTY*IRWSINPGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VT 12231
Range 9: 11410 to 11610 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
155.9 bits(334) | 0.0 | 66/67(99%) | 0/67(0%) | Plus/Plus |
Query 1 MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRMWI*LATN*TQLLRHSALGLWKCSKPVLTTFIQT 201 MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWR+WI*LATN*TQLLRHSALGLWKCSKPVLTTFIQT Subject 11410 MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATN*TQLLRHSALGLWKCSKPVLTTFIQT 11610
Range 10: 11653 to 11784 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
100.0 bits(212) | 0.0 | 43/44(98%) | 0/44(0%) | Plus/Plus |
Query 244 RSGVM*PICRRYLRLCSTILILGVR*PVGLRFTVIFWQVIAD*D 375 RSGVM PICRRYLRLCSTILILGVR*PVGLRFTVIFWQVIAD*D Subject 11653 RSGVMWPICRRYLRLCSTILILGVR*PVGLRFTVIFWQVIAD*D 11784
Range 11: 11922 to 12230 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
248.5 bits(536) | 0.0 | 102/103(99%) | 0/103(0%) | Minus/Minus |
Query 513 VTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPGFIDQRI*YVCCPGYQIFILYFLTVNNNRYRTVCG*IKLRYVGLFWVSPTFRYAPERRFI*KSPVILPFKY 821 VT VFPRESLIVQNIQCGQVLWYCLSL*IFSPGFIDQRI*YVCCPGYQIFILYFLTVNNNRYRTVCG*IKLRYVGLFWVSPTFRYAPERRFI*KSPVILPFKY Subject 11922 VT*VFPRESLIVQNIQCGQVLWYCLSL*IFSPGFIDQRI*YVCCPGYQIFILYFLTVNNNRYRTVCG*IKLRYVGLFWVSPTFRYAPERRFI*KSPVILPFKY 12230
Range 12: 11537 to 11776 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
147.7 bits(316) | 0.0 | 80/80(100%) | 0/80(0%) | Minus/Minus |
Query 128 PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKXXXXXXXXXXXLDPPVITAITGSG*KLSRPVLNTSTALALNGATIA 367 PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA Subject 11537 PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA 11776
Grapevine leafroll associated virus 3 isolate TC BR, complete genome
Sequence ID: KX756668.1 Length: 18498 Number of Matches: 13
Range 1: 11412 to 12230 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
629.3 bits(1374) | 0.0 | 269/273(99%) | 0/273(0%) | Plus/Plus |
Query 3 AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEDVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDNTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGSGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPKETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSN 821 AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVE VDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDNTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVD QPVVIFPKGSPIPCSYTHRYTVG GDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPKETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILH+KAFTRKNLSN Subject 11412 AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDNTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDLQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPKETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHNKAFTRKNLSN 12230
Range 2: 11843 to 12229 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
293.4 bits(634) | 0.0 | 127/129(98%) | 0/129(0%) | Minus/Minus |
Query 434 LLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVDKLNCATSVSFGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPLPTVYL*VYEQGIGLPFGKI 820 LLRFFLVKAL CKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVDKLNCATSVSFGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSP PTVYL*VYEQGIGLPFGKI Subject 11843 LLRFFLVKALLCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVDKLNCATSVSFGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI 12229
Range 3: 11652 to 11870 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
175.2 bits(376) | 0.0 | 71/73(97%) | 0/73(0%) | Minus/Minus |
Query 243 GYWTTFRENYHRLKVHHLVR*RIRQSVHQSQSAITCQNITVNLSPTGYRTPKISIVEHNLRYLRQIGYITPDL 461 GYWTTFRENYHRLKVHHLVR*RIRQSVHQSQSAITCQNITVNLSPT YRTPKISIVEHNLRYLRQIG+ITPDL Subject 11652 GYWTTFRENYHRLKVHHLVR*RIRQSVHQSQSAITCQNITVNLSPTSYRTPKISIVEHNLRYLRQIGHITPDL 11870
Range 4: 11412 to 11612 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
165.1 bits(354) | 0.0 | 66/67(99%) | 0/67(0%) | Minus/Minus |
Query 3 RVWIKVVKTGFEHFHSPSAEWRNNCV*FVASQIHILHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG 203 RVWIKVVKTGFEHFHSPSAEWRNNCV*FVASQIH LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG Subject 11412 RVWIKVVKTGFEHFHSPSAEWRNNCV*FVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG 11612
Range 5: 11410 to 12231 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
581.2 bits(1262) | 0.0 | 267/274(97%) | 0/274(0%) | Minus/Minus |
Query 1 CYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSRIYRPTNLVRLLSRVPDIHSLLPHR*Q*QIPYRLWIN*IALRRSLLGLPYVSIRPGTSVHLEKPCYSPLQIYRTPHLHYPLCICECMNRVLDYLSGKLXXXXXXXXXPLAYSSKCPPVSVRYYLPKYHSKP*PHRLPNT*NQYCRTQP*ISAANWLHHS*P*LEHLTPQS*QQ*QGLDKSCQDRF*TLPQP*R*MAQQLRLVRR*SNXXXXXXXLRG*GVAL*RYC*TSLPSSRIRISLTWH 822 CY GFSS*KPY AKYSVWSSTLVLP*PLNLLSRIYRPTNLVRLLSRVPDIHSLLPHR*Q*QIPYRLWIN*IALRRSLLGLPYVSIRPGTSVHLEKPCYSPLQIYRTPHLH+PLCICECMNRVLDYLSGKLPPVE PPPRPLAYSSKCPPVSVRYYLPKYHSKP*PH+LPNT*NQYCRTQP*ISAANW HHS*P*LEHLTPQS*QQ*QGLDKSCQDRF*TLPQP*R*MAQQLRLVRR*SNP PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH Subject 11410 CYLGFSS*KPYCAKYSVWSSTLVLP*PLNLLSRIYRPTNLVRLLSRVPDIHSLLPHR*Q*QIPYRLWIN*IALRRSLLGLPYVSIRPGTSVHLEKPCYSPLQIYRTPHLHHPLCICECMNRVLDYLSGKLPPVEGPPPRPLAYSSKCPPVSVRYYLPKYHSKP*PHKLPNT*NQYCRTQP*ISAANWPHHS*P*LEHLTPQS*QQ*QGLDKSCQDRF*TLPQP*R*MAQQLRLVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH 12231
Range 6: 11540 to 12229 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
501.9 bits(1089) | 0.0 | 225/230(98%) | 0/230(0%) | Plus/Plus |
Query 131 NCCAIQR*GCGSVQNRS*QLLSRPCYCCYDWGVKCSS*GQE*CSQFAADI*GCVRQY*F*VFGSLWG*GLL*YFGR**RTETGGHFDEYANXXXXXXXXXXNFPER*SNTLFIHSQIHSG*WRCGVRYI*RGE*QGFSK*TDVPGRIET*GRPKRDRRSAI*FIHRRYGICYC*R*GSKE*ISGTRDNKRTRFVGL*IRERRFRG*GNTRVLDHTEYFAR*GFHEEKPE* 820 NCCAIQR*GCGSVQNRS*QLLSRPCYCCYDWGVKCSS*GQE*C QFAADI*GCVRQY*F*VFGSLWG*GLL*YFGR**RTETGGHFDEYANGRGGG STGGNFPER*SNTLFIHSQIHSG WRCGVRYI*RGE*QGFSK*TDVPGRIET*GRPKRDRRSAI*FIHRRYGICYC*R*GSKE*ISGTRDNKRTRFVGL*IRERRFRG*GNTRVLDHTEYFA+*GFHEEKP+* Subject 11540 NCCAIQR*GCGSVQNRS*QLLSRPCYCCYDWGVKCSS*GQE*CGQFAADI*GCVRQY*F*VFGSLWG*GLL*YFGR**RTETGGHFDEYANGRGGGPSTGGNFPER*SNTLFIHSQIHSGWWRCGVRYI*RGE*QGFSK*TDVPGRIET*GRPKRDRRSAI*FIHRRYGICYC*R*GSKE*ISGTRDNKRTRFVGL*IRERRFRG*GNTRVLDHTEYFAQ*GFHEEKPK* 12229
Range 7: 11411 to 11488 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
62.9 bits(131) | 0.0 | 26/26(100%) | 0/26(0%) | Plus/Plus |
Query 2 CQVRDIRILDEGRLV*Q*RYNATPYP 79 CQVRDIRILDEGRLV*Q*RYNATPYP Subject 11411 CQVRDIRILDEGRLV*Q*RYNATPYP 11488
Range 8: 11845 to 12231 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
305.8 bits(661) | 0.0 | 129/129(100%) | 0/129(0%) | Plus/Plus |
Query 436 FSRKVVQYPVHTLTDTQWVVEMWCTVYLKGRITGLF*MNRRSGAYRNVGETQKRPT*RNLIYPQTVRYLLLLTVRK*RMNIWYPGQQTY*IRWSINPGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VT 822 FSRKVVQYPVHTLTDTQWVVEMWCTVYLKGRITGLF*MNRRSGAYRNVGETQKRPT*RNLIYPQTVRYLLLLTVRK*RMNIWYPGQQTY*IRWSINPGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VT Subject 11845 FSRKVVQYPVHTLTDTQWVVEMWCTVYLKGRITGLF*MNRRSGAYRNVGETQKRPT*RNLIYPQTVRYLLLLTVRK*RMNIWYPGQQTY*IRWSINPGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VT 12231
Range 9: 11410 to 11610 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
155.9 bits(334) | 0.0 | 66/67(99%) | 0/67(0%) | Plus/Plus |
Query 1 MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRMWI*LATN*TQLLRHSALGLWKCSKPVLTTFIQT 201 MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWR+WI*LATN*TQLLRHSALGLWKCSKPVLTTFIQT Subject 11410 MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATN*TQLLRHSALGLWKCSKPVLTTFIQT 11610
Range 10: 11653 to 11784 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
95.5 bits(202) | 0.0 | 42/44(95%) | 0/44(0%) | Plus/Plus |
Query 244 RSGVM*PICRRYLRLCSTILILGVR*PVGLRFTVIFWQVIAD*D 375 RSGVM PICRRYLRLCSTILILGVR* VGLRFTVIFWQVIAD*D Subject 11653 RSGVMWPICRRYLRLCSTILILGVR*LVGLRFTVIFWQVIAD*D 11784
Range 11: 11922 to 12230 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
248.5 bits(536) | 0.0 | 102/103(99%) | 0/103(0%) | Minus/Minus |
Query 513 VTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPGFIDQRI*YVCCPGYQIFILYFLTVNNNRYRTVCG*IKLRYVGLFWVSPTFRYAPERRFI*KSPVILPFKY 821 VT VFPRESLIVQNIQCGQVLWYCLSL*IFSPGFIDQRI*YVCCPGYQIFILYFLTVNNNRYRTVCG*IKLRYVGLFWVSPTFRYAPERRFI*KSPVILPFKY Subject 11922 VT*VFPRESLIVQNIQCGQVLWYCLSL*IFSPGFIDQRI*YVCCPGYQIFILYFLTVNNNRYRTVCG*IKLRYVGLFWVSPTFRYAPERRFI*KSPVILPFKY 12230
Range 12: 11537 to 11776 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
147.7 bits(316) | 0.0 | 80/80(100%) | 0/80(0%) | Minus/Minus |
Query 128 PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKXXXXXXXXXXXLDPPVITAITGSG*KLSRPVLNTSTALALNGATIA 367 PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA Subject 11537 PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA 11776
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 13
Range 1: 11412 to 12230 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
628.8 bits(1373) | 0.0 | 269/273(99%) | 0/273(0%) | Plus/Plus |
Query 3 AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEDVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDNTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGSGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPKETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSN 821 AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVE VDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFD+TDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVG GDVVYGIFEGENNRAFLNEPTFRGVSKRRGDP ETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSN Subject 11412 AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSN 12230
Range 2: 11843 to 12229 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
289.3 bits(625) | 0.0 | 125/129(97%) | 0/129(0%) | Minus/Minus |
Query 434 LLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVDKLNCATSVSFGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPLPTVYL*VYEQGIGLPFGKI 820 LLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSV++LNCATSVS GSPLRFDTPRNVGSFRKALLFSPSNIPYTTSP PTVYL*VYEQGIGLPFGKI Subject 11843 LLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI 12229
Range 3: 11412 to 11612 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
150.9 bits(323) | 0.0 | 60/67(90%) | 0/67(0%) | Minus/Minus |
Query 3 RVWIKVVKTGFEHFHSPSAEWRNNCV*FVASQIHILHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG 203 RVW+KVVKT FE+FHSPSAEW N+CV FVASQIH LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG Subject 11412 RVWVKVVKTSFEYFHSPSAEWCNDCVQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG 11612
Range 4: 11652 to 11870 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
150.4 bits(322) | 0.0 | 61/73(84%) | 0/73(0%) | Minus/Minus |
Query 243 GYWTTFRENYHRLKVHHLVR*RIRQSVHQSQSAITCQNITVNLSPTGYRTPKISIVEHNLRYLRQIGYITPDL 461 GYWTTFRENYHRLK+H+LVR*RIR SVHQSQSAITCQNI VNLSPT +RT KI VEH+LRYLRQI +ITPDL Subject 11652 GYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNIAVNLSPTSHRTSKIGTVEHDLRYLRQISHITPDL 11870
Range 5: 11410 to 12231 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
499.6 bits(1084) | 0.0 | 237/274(86%) | 0/274(0%) | Minus/Minus |
Query 1 CYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSRIYRPTNLVRLLSRVPDIHSLLPHR*Q*QIPYRLWIN*IALRRSLLGLPYVSIRPGTSVHLEKPCYSPLQIYRTPHLHYPLCICECMNRVLDYLSGKLXXXXXXXXXPLAYSSKCPPVSVRYYLPKYHSKP*PHRLPNT*NQYCRTQP*ISAANWLHHS*P*LEHLTPQS*QQ*QGLDKSCQDRF*TLPQP*R*MAQQLRLVRR*SNXXXXXXXLRG*GVAL*RYC*TSLPSSRIRISLTWH 822 CYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLS+IYRP N VRLLSRVPDIHSLLPH *+*Q P+R W +* A RRSLLGLPYVSIRPGTSVHLEK CYSPLQIYR PHLH+PLCI E MNRVLDYLSGKLPP E+P PRPLAYS KCPPVSVRYYLPKY SKP*PH+ PN *N+YCRT+P*ISAAN HHS*P*LEHLTPQS*QQ* GL KSCQD+F* LPQP*R*M Q+LR VRR*SNP PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH Subject 11410 CYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYRSKP*PHKPPNI*NRYCRTRP*ISAAN*PHHS*P*LEHLTPQS*QQ*PGLGKSCQDQF*ILPQP*R*MVQRLRPVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH 12231
Range 6: 11540 to 12229 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
423.1 bits(917) | 0.0 | 195/230(85%) | 0/230(0%) | Plus/Plus |
Query 131 NCCAIQR*GCGSVQNRS*QLLSRPCYCCYDWGVKCSS*GQE*CSQFAADI*GCVRQY*F*VFGSLWG*GLL*YFGR**RTETGGHFDEYANXXXXXXXXXXNFPER*SNTLFIHSQIHSG*WRCGVRYI*RGE*QGFSK*TDVPGRIET*GRPKRDRRSAI*FIHRRYGICYC*R*GSKE*ISGTRDNKRTRFVGL*IRERRFRG*GNTRVLDHTEYFAR*GFHEEKPE* 820 N C IQR*GCGS+QN S*QLL RP YCCYDWGVKCSS*GQE*C FAADI*G VRQY F*+FG LWG*GLL YFGR**RTETGGHF+EYANGRG G S GGNFPER*SNTLFI+S IHSG WRCG+RYI*RGE*Q FSK*TDVPGRIET*GRP RDRR A+* +H R G+CY * *GSKE*ISGTRDNKRT F+GL*I ERRFRG*GNTRVLDHTEYFAR*GFHEEKPE* Subject 11540 NRCTIQR*GCGSIQNWS*QLLPRPGYCCYDWGVKCSS*GQE*CG*FAADI*GRVRQYRF*MFGGLWG*GLLRYFGR**RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWERRFRG*GNTRVLDHTEYFAR*GFHEEKPE* 12229
Range 7: 11411 to 11488 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
62.9 bits(131) | 0.0 | 26/26(100%) | 0/26(0%) | Plus/Plus |
Query 2 CQVRDIRILDEGRLV*Q*RYNATPYP 79 CQVRDIRILDEGRLV*Q*RYNATPYP Subject 11411 CQVRDIRILDEGRLV*Q*RYNATPYP 11488
Range 8: 11845 to 12231 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
255.4 bits(551) | 0.0 | 113/129(88%) | 0/129(0%) | Plus/Plus |
Query 436 FSRKVVQYPVHTLTDTQWVVEMWCTVYLKGRITGLF*MNRRSGAYRNVGETQKRPT*RNLIYPQTVRYLLLLTVRK*RMNIWYPGQQTY*IRWSINPGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VT 822 FSRKVVQYPVH L DTQWVVEMW TVYLKGRIT LF*MNRRSGAYRNVGETQ RPT R+LI P+T R LL L VRK*RMNIWYPGQQTY I WSIN GEKI*RLRQYQST*PH*IFCTIRLSRGKT*VT Subject 11845 FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VT 12231
Range 9: 11410 to 11610 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
136.7 bits(292) | 0.0 | 60/67(90%) | 0/67(0%) | Plus/Plus |
Query 1 MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRMWI*LATN*TQLLRHSALGLWKCSKPVLTTFIQT 201 MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWR+WI*LATN TQ L HSALGLWK SK VLTTF QT Subject 11410 MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNWTQSLHHSALGLWKYSKLVLTTFTQT 11610
Range 10: 11653 to 11784 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
77.1 bits(162) | 0.0 | 35/44(80%) | 0/44(0%) | Plus/Plus |
Query 244 RSGVM*PICRRYLRLCSTILILGVR*PVGLRFTVIFWQVIAD*D 375 RSGVM ICRRYLR CST+ IL VR VGLRFT IFWQVIAD*D Subject 11653 RSGVMWLICRRYLRSCSTVPILDVRWLVGLRFTAIFWQVIAD*D 11784
Range 11: 11922 to 12230 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
220.5 bits(475) | 0.0 | 91/103(88%) | 0/103(0%) | Minus/Minus |
Query 513 VTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPGFIDQRI*YVCCPGYQIFILYFLTVNNNRYRTVCG*IKLRYVGLFWVSPTFRYAPERRFI*KSPVILPFKY 821 VTQVFPRESLIVQNIQCGQVLWYCLSL*IFSP FIDQ I YVCCPGYQIFILYFLT+N+NR+R+V G IKLR+VGL+WVSPTFRYAPERRFI*KS VILPFKY Subject 11922 VTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKY 12230
Range 12: 11537 to 11776 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
147.7 bits(316) | 0.0 | 80/80(100%) | 0/80(0%) | Minus/Minus |
Query 128 PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKXXXXXXXXXXXLDPPVITAITGSG*KLSRPVLNTSTALALNGATIA 367 PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA Subject 11537 PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA 11776
Grapevine leafroll associated virus 3 isolate 621, complete genome
Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 13
Range 1: 11412 to 12230 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
628.8 bits(1373) | 0.0 | 269/273(99%) | 0/273(0%) | Plus/Plus |
Query 3 AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEDVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDNTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGSGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPKETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSN 821 AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVE VDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFD+TDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVG GDVVYGIFEGENNRAFLNEPTFRGVSKRRGDP ETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSN Subject 11412 AKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRKNLSN 12230
Range 2: 11843 to 12229 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
289.3 bits(625) | 0.0 | 125/129(97%) | 0/129(0%) | Minus/Minus |
Query 434 LLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVDKLNCATSVSFGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPLPTVYL*VYEQGIGLPFGKI 820 LLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSV++LNCATSVS GSPLRFDTPRNVGSFRKALLFSPSNIPYTTSP PTVYL*VYEQGIGLPFGKI Subject 11843 LLRFFLVKALSCKIFSVVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKI 12229
Range 3: 11652 to 11870 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
152.7 bits(327) | 0.0 | 62/73(85%) | 0/73(0%) | Minus/Minus |
Query 243 GYWTTFRENYHRLKVHHLVR*RIRQSVHQSQSAITCQNITVNLSPTGYRTPKISIVEHNLRYLRQIGYITPDL 461 GYWTTFRENYHRLK+H+LVR*RIR SVHQSQSAITCQNITVNLSPT +RT KI VEH+LRYLRQI +ITPDL Subject 11652 GYWTTFRENYHRLKIHYLVR*RIR*SVHQSQSAITCQNITVNLSPTSHRTSKIGTVEHDLRYLRQISHITPDL 11870
Range 4: 11412 to 11612 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
150.9 bits(323) | 0.0 | 60/67(90%) | 0/67(0%) | Minus/Minus |
Query 3 RVWIKVVKTGFEHFHSPSAEWRNNCV*FVASQIHILHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG 203 RVW+KVVKT FE+FHSPSAEW N+CV FVASQIH LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG Subject 11412 RVWVKVVKTSFEYFHSPSAEWCNDCVQFVASQIHNLHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LG 11612
Range 5: 11410 to 12231 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
498.7 bits(1082) | 0.0 | 237/274(86%) | 0/274(0%) | Minus/Minus |
Query 1 CYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSRIYRPTNLVRLLSRVPDIHSLLPHR*Q*QIPYRLWIN*IALRRSLLGLPYVSIRPGTSVHLEKPCYSPLQIYRTPHLHYPLCICECMNRVLDYLSGKLXXXXXXXXXPLAYSSKCPPVSVRYYLPKYHSKP*PHRLPNT*NQYCRTQP*ISAANWLHHS*P*LEHLTPQS*QQ*QGLDKSCQDRF*TLPQP*R*MAQQLRLVRR*SNXXXXXXXLRG*GVAL*RYC*TSLPSSRIRISLTWH 822 CYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLS+IYRP N VRLLSRVPDIHSLLPH *+*Q P+R W +* A RRSLLGLPYVSIRPGTSVHLEK CYSPLQIYR HLH+PLCI E MNRVLDYLSGKLPP E+P PRPLAYS KCPPVSVRYYLPKYHSKP*PH+ PN *N+YCRT+P*ISAAN HHS*P*LEHLTPQS*QQ* GL KSCQD+F* LPQP*R*M Q+LR VRR*SNP PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH Subject 11410 CYSGFSS*KPYRAKYSVWSSTLVLP*PLNLLSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRILHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCPPVSVRYYLPKYHSKP*PHKPPNI*NRYCRTRP*ISAAN*PHHS*P*LEHLTPQS*QQ*PGLGKSCQDQF*ILPQP*R*MVQRLRPVRR*SNPQPPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWH 12231
Range 6: 11540 to 12229 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
422.6 bits(916) | 0.0 | 195/230(85%) | 0/230(0%) | Plus/Plus |
Query 131 NCCAIQR*GCGSVQNRS*QLLSRPCYCCYDWGVKCSS*GQE*CSQFAADI*GCVRQY*F*VFGSLWG*GLL*YFGR**RTETGGHFDEYANXXXXXXXXXXNFPER*SNTLFIHSQIHSG*WRCGVRYI*RGE*QGFSK*TDVPGRIET*GRPKRDRRSAI*FIHRRYGICYC*R*GSKE*ISGTRDNKRTRFVGL*IRERRFRG*GNTRVLDHTEYFAR*GFHEEKPE* 820 N C IQR*GCGS+QN S*QLL RP YCCYDWGVKCSS*GQE*C FAADI*G VRQY F*+FG LWG*GLL*YFGR**RTETGGHF+EYANGRG G S GGNFPER*SNTLFI+S IHSG WRC +RYI*RGE*Q FSK*TDVPGRIET*GRP RDRR A+* +H R G+CY * *GSKE*ISGTRDNKRT F+GL*I ERRFRG*GNTRVLDHTEYFAR*GFHEEKPE* Subject 11540 NRCTIQR*GCGSIQNWS*QLLPRPGYCCYDWGVKCSS*GQE*CG*FAADI*GRVRQYRF*MFGGLWG*GLL*YFGR**RTETGGHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCSIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWERRFRG*GNTRVLDHTEYFAR*GFHEEKPE* 12229
Range 7: 11411 to 11488 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
62.9 bits(131) | 0.0 | 26/26(100%) | 0/26(0%) | Plus/Plus |
Query 2 CQVRDIRILDEGRLV*Q*RYNATPYP 79 CQVRDIRILDEGRLV*Q*RYNATPYP Subject 11411 CQVRDIRILDEGRLV*Q*RYNATPYP 11488
Range 8: 11845 to 12231 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
248.5 bits(536) | 0.0 | 112/129(87%) | 0/129(0%) | Plus/Plus |
Query 436 FSRKVVQYPVHTLTDTQWVVEMWCTVYLKGRITGLF*MNRRSGAYRNVGETQKRPT*RNLIYPQTVRYLLLLTVRK*RMNIWYPGQQTY*IRWSINPGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VT 822 FSRKVVQYPVH L DTQWVVEM TVYLKGRIT LF*MNRRSGAYRNVGETQ RPT R+LI P+T R LL L VRK*RMNIWYPGQQTY I WSIN GEKI*RLRQYQST*PH*IFCTIRLSRGKT*VT Subject 11845 FSRKVVQYPVHILIDTQWVVEM*YTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGEKI*RLRQYQST*PH*IFCTIRLSRGKT*VT 12231
Range 9: 11410 to 11610 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
136.7 bits(292) | 0.0 | 60/67(90%) | 0/67(0%) | Plus/Plus |
Query 1 MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRMWI*LATN*TQLLRHSALGLWKCSKPVLTTFIQT 201 MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWR+WI*LATN TQ L HSALGLWK SK VLTTF QT Subject 11410 MPS*GYSYPR*RKTCLTITL*RNTLSP*KGVWRLWI*LATNWTQSLHHSALGLWKYSKLVLTTFTQT 11610
Range 10: 11653 to 11784 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.0 bits(166) | 0.0 | 36/44(82%) | 0/44(0%) | Plus/Plus |
Query 244 RSGVM*PICRRYLRLCSTILILGVR*PVGLRFTVIFWQVIAD*D 375 RSGVM ICRRYLR CST+ IL VR VGLRFTVIFWQVIAD*D Subject 11653 RSGVMWLICRRYLRSCSTVPILDVRWLVGLRFTVIFWQVIAD*D 11784
Range 11: 11922 to 12230 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
220.5 bits(475) | 0.0 | 91/103(88%) | 0/103(0%) | Minus/Minus |
Query 513 VTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPGFIDQRI*YVCCPGYQIFILYFLTVNNNRYRTVCG*IKLRYVGLFWVSPTFRYAPERRFI*KSPVILPFKY 821 VTQVFPRESLIVQNIQCGQVLWYCLSL*IFSP FIDQ I YVCCPGYQIFILYFLT+N+NR+R+V G IKLR+VGL+WVSPTFRYAPERRFI*KS VILPFKY Subject 11922 VTQVFPRESLIVQNIQCGQVLWYCLSL*IFSPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKY 12230
Range 12: 11537 to 11776 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
147.7 bits(316) | 0.0 | 80/80(100%) | 0/80(0%) | Minus/Minus |
Query 128 PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKXXXXXXXXXXXLDPPVITAITGSG*KLSRPVLNTSTALALNGATIA 367 PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA Subject 11537 PLLPAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTSTALALNGATIA 11776
Nucleotide Sequence (310 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
200.8 | 1109.0 | 24% | 4.456e-50 | 93% | NC_004667.1 | |
200.8 | 1109.0 | 24% | 4.456e-50 | 93% | AF037268.2 | |
200.8 | 1109.0 | 24% | 4.456e-50 | 93% | GQ352632.1 | |
200.8 | 1109.0 | 24% | 4.456e-50 | 93% | KX756668.1 | |
199.0 | 1079.7 | 24% | 1.587e-49 | 92% | EU259806.1 |
Alignments
Grapevine leafroll associated virus 3, complete genome
Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 7
Range 1: 2817 to 3068 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
200.8 bits(432) | 0.0 | 81/84(96%) | 0/84(0%) | Plus/Minus |
Query 59 TGEKTCPRTVDVRNVPHYERIYRIFSNWQGFSIFCLHCLHDLN*IFHDSPREDAQATILQFPTEGLLRNIKGTSELQPV*SSRS 310 T +KTCPRTVDVRNVPHYERIYRIFSNWQGFSIFCLHCLHDLN*IFHDSPREDAQATILQFPTEGLLRNIKGT ELQPV*SSRS Subject 2817 TAKKTCPRTVDVRNVPHYERIYRIFSNWQGFSIFCLHCLHDLN*IFHDSPREDAQATILQFPTEGLLRNIKGTPELQPV*SSRS 3068
Range 2: 2819 to 3067 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.4 bits(418) | 0.0 | 81/83(98%) | 0/83(0%) | Minus/Plus |
Query 60 FWSFRQVGAQRCL*YFEGDLR*ETEE*SLARLL*GYRGRFN*GHEGNEDRRWKTPANY*RFCICVHNGERF*RPLYEGRSSRR 308 FWSFRQVGAQ CL*YFEGDLR*ETEE*SLARLL*GYRGRFN*GHEGNEDRRWKTPANY*RFCICVHNGERF*RPLYEGRSS R Subject 2819 FWSFRQVGAQGCL*YFEGDLR*ETEE*SLARLL*GYRGRFN*GHEGNEDRRWKTPANY*RFCICVHNGERF*RPLYEGRSSWR 3067
Range 3: 2817 to 3068 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
193.1 bits(415) | 0.0 | 83/84(99%) | 0/84(0%) | Minus/Plus |
Query 59 TSGASDRLELRGAFDISKETFGRKLKNSRLRVFSRAIVEDSIKVMKAMKTEDGKPLPITEDSVYAFIMGNVSNVHCTRAGLLAG 310 TSGASDRLELRGAFDISKETFGRKLKNSRLRVFSRAIVEDSIKVMKAMKTEDGKPLPITEDSVYAFIMGNVSNVHCTRAGLL G Subject 2817 TSGASDRLELRGAFDISKETFGRKLKNSRLRVFSRAIVEDSIKVMKAMKTEDGKPLPITEDSVYAFIMGNVSNVHCTRAGLLGG 3068
Range 4: 2819 to 3073 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
191.2 bits(411) | 0.0 | 83/85(98%) | 0/85(0%) | Plus/Minus |
Query 54 FGPARRPALVQWTLETFPIMNAYTESSVIGRGFPSSVFIAFMTLIESSTIALEKTRKRLFFSFLPKVSFEISKAPLSSNLSEAPE 308 F P RRPALVQWTLETFPIMNAYTESSVIGRGFPSSVFIAFMTLIESSTIALEKTRKRLFFSFLPKVSFEISKAPLSSNLSEAPE Subject 2819 FEPPRRPALVQWTLETFPIMNAYTESSVIGRGFPSSVFIAFMTLIESSTIALEKTRKRLFFSFLPKVSFEISKAPLSSNLSEAPE 3073
Range 5: 2818 to 3081 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
187.6 bits(403) | 0.0 | 82/88(93%) | 0/88(0%) | Minus/Plus |
Query 46 LLELQTGWSSEVPLIFRRRPSVGN*RIVACASSLGLSWKIQLRS*RQ*RQKMENPCQLLKILYMRS*WGTFLTSTVRGQVFSPVQTHP 309 LLELQTGWSS VPLIFRRRPSVGN*RIVACASSLGLSWKIQLRS*RQ*RQKMENPCQLLKILYMRS*WGTFLTSTVRGQVF V+ P Subject 2818 LLELQTGWSSGVPLIFRRRPSVGN*RIVACASSLGLSWKIQLRS*RQ*RQKMENPCQLLKILYMRS*WGTFLTSTVRGQVFLAVRKRP 3081
Grapevine leafroll associated virus 3, complete genome
Sequence ID: AF037268.2 Length: 17919 Number of Matches: 7
Range 1: 2817 to 3068 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
200.8 bits(432) | 0.0 | 81/84(96%) | 0/84(0%) | Plus/Minus |
Query 59 TGEKTCPRTVDVRNVPHYERIYRIFSNWQGFSIFCLHCLHDLN*IFHDSPREDAQATILQFPTEGLLRNIKGTSELQPV*SSRS 310 T +KTCPRTVDVRNVPHYERIYRIFSNWQGFSIFCLHCLHDLN*IFHDSPREDAQATILQFPTEGLLRNIKGT ELQPV*SSRS Subject 2817 TAKKTCPRTVDVRNVPHYERIYRIFSNWQGFSIFCLHCLHDLN*IFHDSPREDAQATILQFPTEGLLRNIKGTPELQPV*SSRS 3068
Range 2: 2819 to 3067 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.4 bits(418) | 0.0 | 81/83(98%) | 0/83(0%) | Minus/Plus |
Query 60 FWSFRQVGAQRCL*YFEGDLR*ETEE*SLARLL*GYRGRFN*GHEGNEDRRWKTPANY*RFCICVHNGERF*RPLYEGRSSRR 308 FWSFRQVGAQ CL*YFEGDLR*ETEE*SLARLL*GYRGRFN*GHEGNEDRRWKTPANY*RFCICVHNGERF*RPLYEGRSS R Subject 2819 FWSFRQVGAQGCL*YFEGDLR*ETEE*SLARLL*GYRGRFN*GHEGNEDRRWKTPANY*RFCICVHNGERF*RPLYEGRSSWR 3067
Range 3: 2817 to 3068 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
193.1 bits(415) | 0.0 | 83/84(99%) | 0/84(0%) | Minus/Plus |
Query 59 TSGASDRLELRGAFDISKETFGRKLKNSRLRVFSRAIVEDSIKVMKAMKTEDGKPLPITEDSVYAFIMGNVSNVHCTRAGLLAG 310 TSGASDRLELRGAFDISKETFGRKLKNSRLRVFSRAIVEDSIKVMKAMKTEDGKPLPITEDSVYAFIMGNVSNVHCTRAGLL G Subject 2817 TSGASDRLELRGAFDISKETFGRKLKNSRLRVFSRAIVEDSIKVMKAMKTEDGKPLPITEDSVYAFIMGNVSNVHCTRAGLLGG 3068
Range 4: 2819 to 3073 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
191.2 bits(411) | 0.0 | 83/85(98%) | 0/85(0%) | Plus/Minus |
Query 54 FGPARRPALVQWTLETFPIMNAYTESSVIGRGFPSSVFIAFMTLIESSTIALEKTRKRLFFSFLPKVSFEISKAPLSSNLSEAPE 308 F P RRPALVQWTLETFPIMNAYTESSVIGRGFPSSVFIAFMTLIESSTIALEKTRKRLFFSFLPKVSFEISKAPLSSNLSEAPE Subject 2819 FEPPRRPALVQWTLETFPIMNAYTESSVIGRGFPSSVFIAFMTLIESSTIALEKTRKRLFFSFLPKVSFEISKAPLSSNLSEAPE 3073
Range 5: 2818 to 3081 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
187.6 bits(403) | 0.0 | 82/88(93%) | 0/88(0%) | Minus/Plus |
Query 46 LLELQTGWSSEVPLIFRRRPSVGN*RIVACASSLGLSWKIQLRS*RQ*RQKMENPCQLLKILYMRS*WGTFLTSTVRGQVFSPVQTHP 309 LLELQTGWSS VPLIFRRRPSVGN*RIVACASSLGLSWKIQLRS*RQ*RQKMENPCQLLKILYMRS*WGTFLTSTVRGQVF V+ P Subject 2818 LLELQTGWSSGVPLIFRRRPSVGN*RIVACASSLGLSWKIQLRS*RQ*RQKMENPCQLLKILYMRS*WGTFLTSTVRGQVFLAVRKRP 3081
Grapevine leafroll associated virus 3 isolate 623, complete genome
Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 7
Range 1: 3396 to 3647 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
200.8 bits(432) | 0.0 | 81/84(96%) | 0/84(0%) | Plus/Minus |
Query 59 TGEKTCPRTVDVRNVPHYERIYRIFSNWQGFSIFCLHCLHDLN*IFHDSPREDAQATILQFPTEGLLRNIKGTSELQPV*SSRS 310 T +KTCPRTVDVRNVPHYERIYRIFSNWQGFSIFCLHCLHDLN*IFHDSPREDAQATILQFPTEGLLRNIKGT ELQPV*SSRS Subject 3396 TAKKTCPRTVDVRNVPHYERIYRIFSNWQGFSIFCLHCLHDLN*IFHDSPREDAQATILQFPTEGLLRNIKGTPELQPV*SSRS 3647
Range 2: 3398 to 3646 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.4 bits(418) | 0.0 | 81/83(98%) | 0/83(0%) | Minus/Plus |
Query 60 FWSFRQVGAQRCL*YFEGDLR*ETEE*SLARLL*GYRGRFN*GHEGNEDRRWKTPANY*RFCICVHNGERF*RPLYEGRSSRR 308 FWSFRQVGAQ CL*YFEGDLR*ETEE*SLARLL*GYRGRFN*GHEGNEDRRWKTPANY*RFCICVHNGERF*RPLYEGRSS R Subject 3398 FWSFRQVGAQGCL*YFEGDLR*ETEE*SLARLL*GYRGRFN*GHEGNEDRRWKTPANY*RFCICVHNGERF*RPLYEGRSSWR 3646
Range 3: 3396 to 3647 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
193.1 bits(415) | 0.0 | 83/84(99%) | 0/84(0%) | Minus/Plus |
Query 59 TSGASDRLELRGAFDISKETFGRKLKNSRLRVFSRAIVEDSIKVMKAMKTEDGKPLPITEDSVYAFIMGNVSNVHCTRAGLLAG 310 TSGASDRLELRGAFDISKETFGRKLKNSRLRVFSRAIVEDSIKVMKAMKTEDGKPLPITEDSVYAFIMGNVSNVHCTRAGLL G Subject 3396 TSGASDRLELRGAFDISKETFGRKLKNSRLRVFSRAIVEDSIKVMKAMKTEDGKPLPITEDSVYAFIMGNVSNVHCTRAGLLGG 3647
Range 4: 3398 to 3652 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
191.2 bits(411) | 0.0 | 83/85(98%) | 0/85(0%) | Plus/Minus |
Query 54 FGPARRPALVQWTLETFPIMNAYTESSVIGRGFPSSVFIAFMTLIESSTIALEKTRKRLFFSFLPKVSFEISKAPLSSNLSEAPE 308 F P RRPALVQWTLETFPIMNAYTESSVIGRGFPSSVFIAFMTLIESSTIALEKTRKRLFFSFLPKVSFEISKAPLSSNLSEAPE Subject 3398 FEPPRRPALVQWTLETFPIMNAYTESSVIGRGFPSSVFIAFMTLIESSTIALEKTRKRLFFSFLPKVSFEISKAPLSSNLSEAPE 3652
Range 5: 3397 to 3660 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
187.6 bits(403) | 0.0 | 82/88(93%) | 0/88(0%) | Minus/Plus |
Query 46 LLELQTGWSSEVPLIFRRRPSVGN*RIVACASSLGLSWKIQLRS*RQ*RQKMENPCQLLKILYMRS*WGTFLTSTVRGQVFSPVQTHP 309 LLELQTGWSS VPLIFRRRPSVGN*RIVACASSLGLSWKIQLRS*RQ*RQKMENPCQLLKILYMRS*WGTFLTSTVRGQVF V+ P Subject 3397 LLELQTGWSSGVPLIFRRRPSVGN*RIVACASSLGLSWKIQLRS*RQ*RQKMENPCQLLKILYMRS*WGTFLTSTVRGQVFLAVRKRP 3660
Grapevine leafroll associated virus 3 isolate TC BR, complete genome
Sequence ID: KX756668.1 Length: 18498 Number of Matches: 7
Range 1: 3396 to 3647 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
200.8 bits(432) | 0.0 | 81/84(96%) | 0/84(0%) | Plus/Minus |
Query 59 TGEKTCPRTVDVRNVPHYERIYRIFSNWQGFSIFCLHCLHDLN*IFHDSPREDAQATILQFPTEGLLRNIKGTSELQPV*SSRS 310 T +KTCPRTVDVRNVPHYERIYRIFSNWQGFSIFCLHCLHDLN*IFHDSPREDAQATILQFPTEGLLRNIKGT ELQPV*SSRS Subject 3396 TAKKTCPRTVDVRNVPHYERIYRIFSNWQGFSIFCLHCLHDLN*IFHDSPREDAQATILQFPTEGLLRNIKGTPELQPV*SSRS 3647
Range 2: 3398 to 3646 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.4 bits(418) | 0.0 | 81/83(98%) | 0/83(0%) | Minus/Plus |
Query 60 FWSFRQVGAQRCL*YFEGDLR*ETEE*SLARLL*GYRGRFN*GHEGNEDRRWKTPANY*RFCICVHNGERF*RPLYEGRSSRR 308 FWSFRQVGAQ CL*YFEGDLR*ETEE*SLARLL*GYRGRFN*GHEGNEDRRWKTPANY*RFCICVHNGERF*RPLYEGRSS R Subject 3398 FWSFRQVGAQGCL*YFEGDLR*ETEE*SLARLL*GYRGRFN*GHEGNEDRRWKTPANY*RFCICVHNGERF*RPLYEGRSSWR 3646
Range 3: 3396 to 3647 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
193.1 bits(415) | 0.0 | 83/84(99%) | 0/84(0%) | Minus/Plus |
Query 59 TSGASDRLELRGAFDISKETFGRKLKNSRLRVFSRAIVEDSIKVMKAMKTEDGKPLPITEDSVYAFIMGNVSNVHCTRAGLLAG 310 TSGASDRLELRGAFDISKETFGRKLKNSRLRVFSRAIVEDSIKVMKAMKTEDGKPLPITEDSVYAFIMGNVSNVHCTRAGLL G Subject 3396 TSGASDRLELRGAFDISKETFGRKLKNSRLRVFSRAIVEDSIKVMKAMKTEDGKPLPITEDSVYAFIMGNVSNVHCTRAGLLGG 3647
Range 4: 3398 to 3652 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
191.2 bits(411) | 0.0 | 83/85(98%) | 0/85(0%) | Plus/Minus |
Query 54 FGPARRPALVQWTLETFPIMNAYTESSVIGRGFPSSVFIAFMTLIESSTIALEKTRKRLFFSFLPKVSFEISKAPLSSNLSEAPE 308 F P RRPALVQWTLETFPIMNAYTESSVIGRGFPSSVFIAFMTLIESSTIALEKTRKRLFFSFLPKVSFEISKAPLSSNLSEAPE Subject 3398 FEPPRRPALVQWTLETFPIMNAYTESSVIGRGFPSSVFIAFMTLIESSTIALEKTRKRLFFSFLPKVSFEISKAPLSSNLSEAPE 3652
Range 5: 3397 to 3660 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
187.6 bits(403) | 0.0 | 82/88(93%) | 0/88(0%) | Minus/Plus |
Query 46 LLELQTGWSSEVPLIFRRRPSVGN*RIVACASSLGLSWKIQLRS*RQ*RQKMENPCQLLKILYMRS*WGTFLTSTVRGQVFSPVQTHP 309 LLELQTGWSS VPLIFRRRPSVGN*RIVACASSLGLSWKIQLRS*RQ*RQKMENPCQLLKILYMRS*WGTFLTSTVRGQVF V+ P Subject 3397 LLELQTGWSSGVPLIFRRRPSVGN*RIVACASSLGLSWKIQLRS*RQ*RQKMENPCQLLKILYMRS*WGTFLTSTVRGQVFLAVRKRP 3660
Grapevine leafroll associated virus 3 isolate GP18, complete genome
Sequence ID: EU259806.1 Length: 18498 Number of Matches: 7
Range 1: 3396 to 3647 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
199.0 bits(428) | 0.0 | 80/84(95%) | 0/84(0%) | Plus/Minus |
Query 59 TGEKTCPRTVDVRNVPHYERIYRIFSNWQGFSIFCLHCLHDLN*IFHDSPREDAQATILQFPTEGLLRNIKGTSELQPV*SSRS 310 T +KTCPRTVDVRNVPHYERIYRIFSNWQGFSIFCLHCLHDLN*IFHD PREDAQATILQFPTEGLLRNIKGT ELQPV*SSRS Subject 3396 TAKKTCPRTVDVRNVPHYERIYRIFSNWQGFSIFCLHCLHDLN*IFHDGPREDAQATILQFPTEGLLRNIKGTPELQPV*SSRS 3647
Range 2: 3396 to 3647 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
188.0 bits(404) | 0.0 | 81/84(96%) | 0/84(0%) | Minus/Plus |
Query 59 TSGASDRLELRGAFDISKETFGRKLKNSRLRVFSRAIVEDSIKVMKAMKTEDGKPLPITEDSVYAFIMGNVSNVHCTRAGLLAG 310 TSGASD LELRGAFDISKETFGRKLKNSRLRVFSRAIVEDSIKVMK MKTEDGKPLPITEDSVYAFIMGNVSNVHCTRAGLL G Subject 3396 TSGASDGLELRGAFDISKETFGRKLKNSRLRVFSRAIVEDSIKVMKTMKTEDGKPLPITEDSVYAFIMGNVSNVHCTRAGLLGG 3647
Range 3: 3398 to 3646 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
187.1 bits(402) | 0.0 | 78/83(94%) | 0/83(0%) | Minus/Plus |
Query 60 FWSFRQVGAQRCL*YFEGDLR*ETEE*SLARLL*GYRGRFN*GHEGNEDRRWKTPANY*RFCICVHNGERF*RPLYEGRSSRR 308 FWSFR+VGAQ CL*YFEGDLR*ETEE*SLARLL*G+RGRFN*GHE NEDRRWKTPANY*RFCICVHNGERF*RPLYEGRSS R Subject 3398 FWSFRRVGAQGCL*YFEGDLR*ETEE*SLARLL*GHRGRFN*GHEDNEDRRWKTPANY*RFCICVHNGERF*RPLYEGRSSWR 3646
Range 4: 3398 to 3652 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
184.8 bits(397) | 0.0 | 80/85(94%) | 0/85(0%) | Plus/Minus |
Query 54 FGPARRPALVQWTLETFPIMNAYTESSVIGRGFPSSVFIAFMTLIESSTIALEKTRKRLFFSFLPKVSFEISKAPLSSNLSEAPE 308 F P RRPALVQWTLETFPIMNAYTESSVIGRGFPSSVFI FMTLIESST+ALEKTRKRLFFSFLPKVSFEISKAPLSSN SEAPE Subject 3398 FEPPRRPALVQWTLETFPIMNAYTESSVIGRGFPSSVFIVFMTLIESSTMALEKTRKRLFFSFLPKVSFEISKAPLSSNPSEAPE 3652
Range 5: 3397 to 3660 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
184.4 bits(396) | 0.0 | 81/88(92%) | 0/88(0%) | Minus/Plus |
Query 46 LLELQTGWSSEVPLIFRRRPSVGN*RIVACASSLGLSWKIQLRS*RQ*RQKMENPCQLLKILYMRS*WGTFLTSTVRGQVFSPVQTHP 309 LLELQTGWSS VPLIFRRRPSVGN*RIVACASSLG SWKIQLRS*RQ*RQKMENPCQLLKILYMRS*WGTFLTSTVRGQVF V+ P Subject 3397 LLELQTGWSSGVPLIFRRRPSVGN*RIVACASSLGPSWKIQLRS*RQ*RQKMENPCQLLKILYMRS*WGTFLTSTVRGQVFLAVRKRP 3660
Nucleotide Sequence (182 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
143.6 | 805.5 | 33% | 1.724e-33 | 93% | JX559645.1 | |
143.6 | 717.1 | 33% | 1.724e-33 | 78% | JQ423939.1 | |
143.6 | 796.4 | 33% | 1.724e-33 | 92% | NC_004667.1 | |
143.6 | 807.4 | 34% | 1.724e-33 | 92% | KJ174518.1 | |
143.6 | 796.4 | 33% | 1.724e-33 | 92% | AF037268.2 |
Alignments
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 6
Range 1: 6783 to 6962 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
143.6 bits(307) | 0.0 | 59/60(98%) | 0/60(0%) | Plus/Plus |
Query 3 QGLLQLGVFATGASEGLFFGDINQIPFINREKEFRMDCAVFVPKKESVVYTSKSYRCPLD 182 QGLLQLGVFATGASEGLFFGDINQIPFINREK FRMDCAVFVPKKESVVYTSKSYRCPLD Subject 6783 QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLD 6962
Range 2: 6782 to 6961 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
139.9 bits(299) | 0.0 | 58/60(97%) | 0/60(0%) | Minus/Minus |
Query 2 SNGHLYDLEVYTTLSFFGTKTAQSILNSFSLFMNGI*FMSPKKRPSDAPVAKTPNCSKP* 181 SNGHLYDLEVYTTLSFFGTKTAQSILN+FSLFMNGI*FMSPKKRPSDAPVAKTP+CSKP* Subject 6782 SNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP* 6961
Range 3: 6782 to 6961 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
136.2 bits(291) | 0.0 | 56/60(93%) | 0/60(0%) | Plus/Plus |
Query 2 SRLTTIRRLRDWRV*RPLFWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVR 181 SRLTT RRLR+ RV RPLFWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVR Subject 6782 SRLTTTRRLRNRRVGRPLFWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVR 6961
Range 4: 6781 to 6960 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
133.0 bits(284) | 0.0 | 56/60(93%) | 0/60(0%) | Minus/Minus |
Query 1 LTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLQTRQSRRRLIVVSLD 180 LTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGL TR+ RRRL+VVSLD Subject 6781 LTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLD 6960
Range 5: 6783 to 6962 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.0 bits(273) | 0.0 | 57/60(95%) | 0/60(0%) | Minus/Minus |
Query 3 I*RTPV*FRSVYNAFLLWNKNSTIHPKLLLPVYEWYLIYVSKKEAFRRASREDA*L**AL 182 I*RTPV*FRSVYNAFLLWNKNSTIHPK LLPVYEWYLIYVSKKEAFRRA EDA*L**AL Subject 6783 I*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**AL 6962
Range 6: 6781 to 6960 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
124.8 bits(266) | 0.0 | 56/60(93%) | 0/60(0%) | Plus/Plus |
Query 1 IKAYYN*ASSRLARLKASFLET*IRYHS*TGRRSLGWIVLFLFQRRKALYTLLNHTGVR* 180 IKAYYN*ASS+ AR KASFLET*IRYHS*TGRR LGWIVLFLFQRRKALYTLLNHTGVR* Subject 6781 IKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR* 6960
Grapevine leafroll associated virus 3 isolate LN, complete genome
Sequence ID: JQ423939.1 Length: 18563 Number of Matches: 6
Range 1: 6848 to 7027 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
143.6 bits(307) | 0.0 | 59/60(98%) | 0/60(0%) | Plus/Plus |
Query 3 QGLLQLGVFATGASEGLFFGDINQIPFINREKEFRMDCAVFVPKKESVVYTSKSYRCPLD 182 QGLLQLGVFATGASEGLFFGDINQIPFINREK FRMDCAVFVPKKESVVYTSKSYRCPLD Subject 6848 QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLD 7027
Range 2: 6847 to 7026 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
135.8 bits(290) | 0.0 | 56/60(93%) | 0/60(0%) | Minus/Minus |
Query 2 SNGHLYDLEVYTTLSFFGTKTAQSILNSFSLFMNGI*FMSPKKRPSDAPVAKTPNCSKP* 181 SNGHLYDLEVYTTLSFFGTKTAQSILN+FSLFMNGI*FMSPKK PSDAPVAKTP+C+KP* Subject 6847 SNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKSPSDAPVAKTPSCNKP* 7026
Range 3: 6847 to 7026 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
114.2 bits(243) | 0.0 | 47/60(78%) | 0/60(0%) | Plus/Plus |
Query 2 SRLTTIRRLRDWRV*RPLFWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVR 181 SR T RRL +WRV*R LFWRHKSDTIHKQGEGV*DGL CFCSKEGK +H *I+QVS+R Subject 6847 SRFITTRRLCNWRV*RTLFWRHKSDTIHKQGEGV*DGLRCFCSKEGKCGVHL*IVQVSIR 7026
Range 4: 6846 to 7025 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.0 bits(238) | 0.0 | 47/60(78%) | 0/60(0%) | Minus/Minus |
Query 1 LTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLQTRQSRRRLIVVSLD 180 L DTC I*+C FPSLEQKQ NPS*TPSPCL*MVSDLCLQKR LQTRQ +RRL+V++LD Subject 6846 LMDTCTI*RCTPHFPSLEQKQRNPS*TPSPCL*MVSDLCLQKRVLQTRQLQRRLVVINLD 7025
Range 5: 6848 to 7027 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
107.8 bits(229) | 0.0 | 47/60(78%) | 0/60(0%) | Minus/Minus |
Query 3 I*RTPV*FRSVYNAFLLWNKNSTIHPKLLLPVYEWYLIYVSKKEAFRRASREDA*L**AL 182 +* TPV FR V++ FLLWNKNS IHPK LLPVYEWYLIYVSKKE+FRRAS +DA*L** L Subject 6848 V*WTPVRFRGVHHTFLLWNKNSAIHPKHLLPVYEWYLIYVSKKESFRRASCKDA*L**TL 7027
Range 6: 6846 to 7025 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
103.7 bits(220) | 0.0 | 48/60(80%) | 0/60(0%) | Plus/Plus |
Query 1 IKAYYN*ASSRLARLKASFLET*IRYHS*TGRRSLGWIVLFLFQRRKALYTLLNHTGVR* 180 IK YYN*AS +LARLK SFLET*IRYHS*TGRR LGWI LFLFQRRK T LN TGV * Subject 6846 IKVYYN*ASLQLARLKDSFLET*IRYHS*TGRRCLGWIALFLFQRRKVWCTPLNRTGVH* 7025
Grapevine leafroll associated virus 3, complete genome
Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 6
Range 1: 6204 to 6383 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
143.6 bits(307) | 0.0 | 59/60(98%) | 0/60(0%) | Plus/Plus |
Query 3 QGLLQLGVFATGASEGLFFGDINQIPFINREKEFRMDCAVFVPKKESVVYTSKSYRCPLD 182 QGLLQLGVFATGASEGLFFGDINQIPFINREK FRMDCAVFVPKKESVVYTSKSYRCPLD Subject 6204 QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLD 6383
Range 2: 6203 to 6382 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
139.9 bits(299) | 0.0 | 58/60(97%) | 0/60(0%) | Minus/Minus |
Query 2 SNGHLYDLEVYTTLSFFGTKTAQSILNSFSLFMNGI*FMSPKKRPSDAPVAKTPNCSKP* 181 SNGHLYDLEVYTTLSFFGTKTAQSILN+FSLFMNGI*FMSPKKRPSDAPVAKTP+CSKP* Subject 6203 SNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP* 6382
Range 3: 6203 to 6382 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
135.8 bits(290) | 0.0 | 55/60(92%) | 0/60(0%) | Plus/Plus |
Query 2 SRLTTIRRLRDWRV*RPLFWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVR 181 SRLTT RRLR+ RV RPLFWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*I+QVSVR Subject 6203 SRLTTTRRLRNRRVGRPLFWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IVQVSVR 6382
Range 4: 6202 to 6381 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
130.3 bits(278) | 0.0 | 55/60(92%) | 0/60(0%) | Minus/Minus |
Query 1 LTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLQTRQSRRRLIVVSLD 180 LTDTC I*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGL TR+ RRRL+VVSLD Subject 6202 LTDTCTI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLD 6381
Range 5: 6204 to 6383 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
125.7 bits(268) | 0.0 | 56/60(93%) | 0/60(0%) | Minus/Minus |
Query 3 I*RTPV*FRSVYNAFLLWNKNSTIHPKLLLPVYEWYLIYVSKKEAFRRASREDA*L**AL 182 I*RTPV FRSVYNAFLLWNKNSTIHPK LLPVYEWYLIYVSKKEAFRRA EDA*L**AL Subject 6204 I*RTPVRFRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**AL 6383
Range 6: 6202 to 6381 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
121.1 bits(258) | 0.0 | 55/60(92%) | 0/60(0%) | Plus/Plus |
Query 1 IKAYYN*ASSRLARLKASFLET*IRYHS*TGRRSLGWIVLFLFQRRKALYTLLNHTGVR* 180 IKAYYN*ASS+ AR KASFLET*IRYHS*TGRR LGWIVLFLFQRRKALYTLLN TGVR* Subject 6202 IKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNRTGVR* 6381
Grapevine leafroll associated virus 3, complete genome
Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 6
Range 1: 6783 to 6962 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
143.6 bits(307) | 0.0 | 59/60(98%) | 0/60(0%) | Plus/Plus |
Query 3 QGLLQLGVFATGASEGLFFGDINQIPFINREKEFRMDCAVFVPKKESVVYTSKSYRCPLD 182 QGLLQLGVFATGASEGLFFGDINQIPFINREK FRMDCAVFVPKKESVVYTSKSYRCPLD Subject 6783 QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLD 6962
Range 2: 6782 to 6961 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
141.7 bits(303) | 0.0 | 57/60(95%) | 0/60(0%) | Plus/Plus |
Query 2 SRLTTIRRLRDWRV*RPLFWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVR 181 SRLTTIRRLRDWRV*RPLFWRHKSDTIHKQGEGV*DGLCC CSKEGK CIHF*IIQ+SVR Subject 6782 SRLTTIRRLRDWRV*RPLFWRHKSDTIHKQGEGV*DGLCCICSKEGKCCIHF*IIQMSVR 6961
Range 3: 6782 to 6961 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
139.9 bits(299) | 0.0 | 58/60(97%) | 0/60(0%) | Minus/Minus |
Query 2 SNGHLYDLEVYTTLSFFGTKTAQSILNSFSLFMNGI*FMSPKKRPSDAPVAKTPNCSKP* 181 SNGHLYDLEVYTTLSFFGT TAQSILN+FSLFMNGI*FMSPKKRPSDAPVAKTPNCSKP* Subject 6782 SNGHLYDLEVYTTLSFFGTNTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPNCSKP* 6961
Range 4: 6781 to 6960 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.1 bits(282) | 0.0 | 57/60(95%) | 0/60(0%) | Minus/Minus |
Query 1 LTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLQTRQSRRRLIVVSLD 180 LTD CMI*KCIQ FPSLEQ QHNPS*TPSPCL*MVSDLCLQKRGLQTRQSRRRLIVVSLD Subject 6781 LTDICMI*KCIQHFPSLEQIQHNPS*TPSPCL*MVSDLCLQKRGLQTRQSRRRLIVVSLD 6960
Range 5: 6781 to 6960 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
126.2 bits(269) | 0.0 | 56/60(93%) | 0/60(0%) | Plus/Plus |
Query 1 IKAYYN*ASSRLARLKASFLET*IRYHS*TGRRSLGWIVLFLFQRRKALYTLLNHTGVR* 180 IKAYYN*ASSRLARLKASFLET*IRYHS*TGRR LGWIVL+LFQRRK LYTLLNHT VR* Subject 6781 IKAYYN*ASSRLARLKASFLET*IRYHS*TGRRCLGWIVLYLFQRRKVLYTLLNHTDVR* 6960
Range 6: 6783 to 6962 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.9 bits(264) | 0.0 | 55/60(92%) | 0/60(0%) | Minus/Minus |
Query 3 I*RTPV*FRSVYNAFLLWNKNSTIHPKLLLPVYEWYLIYVSKKEAFRRASREDA*L**AL 182 +*RT V*FRSVYN FLLWNK STIHPK LLPVYEWYLIYVSKKEAFRRASREDA*L**AL Subject 6783 V*RTSV*FRSVYNTFLLWNKYSTIHPKHLLPVYEWYLIYVSKKEAFRRASREDA*L**AL 6962
Grapevine leafroll associated virus 3, complete genome
Sequence ID: AF037268.2 Length: 17919 Number of Matches: 6
Range 1: 6204 to 6383 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
143.6 bits(307) | 0.0 | 59/60(98%) | 0/60(0%) | Plus/Plus |
Query 3 QGLLQLGVFATGASEGLFFGDINQIPFINREKEFRMDCAVFVPKKESVVYTSKSYRCPLD 182 QGLLQLGVFATGASEGLFFGDINQIPFINREK FRMDCAVFVPKKESVVYTSKSYRCPLD Subject 6204 QGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLD 6383
Range 2: 6203 to 6382 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
139.9 bits(299) | 0.0 | 58/60(97%) | 0/60(0%) | Minus/Minus |
Query 2 SNGHLYDLEVYTTLSFFGTKTAQSILNSFSLFMNGI*FMSPKKRPSDAPVAKTPNCSKP* 181 SNGHLYDLEVYTTLSFFGTKTAQSILN+FSLFMNGI*FMSPKKRPSDAPVAKTP+CSKP* Subject 6203 SNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP* 6382
Range 3: 6203 to 6382 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
135.8 bits(290) | 0.0 | 55/60(92%) | 0/60(0%) | Plus/Plus |
Query 2 SRLTTIRRLRDWRV*RPLFWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVR 181 SRLTT RRLR+ RV RPLFWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*I+QVSVR Subject 6203 SRLTTTRRLRNRRVGRPLFWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IVQVSVR 6382
Range 4: 6202 to 6381 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
130.3 bits(278) | 0.0 | 55/60(92%) | 0/60(0%) | Minus/Minus |
Query 1 LTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLQTRQSRRRLIVVSLD 180 LTDTC I*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGL TR+ RRRL+VVSLD Subject 6202 LTDTCTI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLD 6381
Range 5: 6204 to 6383 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
125.7 bits(268) | 0.0 | 56/60(93%) | 0/60(0%) | Minus/Minus |
Query 3 I*RTPV*FRSVYNAFLLWNKNSTIHPKLLLPVYEWYLIYVSKKEAFRRASREDA*L**AL 182 I*RTPV FRSVYNAFLLWNKNSTIHPK LLPVYEWYLIYVSKKEAFRRA EDA*L**AL Subject 6204 I*RTPVRFRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**AL 6383
Range 6: 6202 to 6381 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
121.1 bits(258) | 0.0 | 55/60(92%) | 0/60(0%) | Plus/Plus |
Query 1 IKAYYN*ASSRLARLKASFLET*IRYHS*TGRRSLGWIVLFLFQRRKALYTLLNHTGVR* 180 IKAYYN*ASS+ AR KASFLET*IRYHS*TGRR LGWIVLFLFQRRKALYTLLN TGVR* Subject 6202 IKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNRTGVR* 6381
Nucleotide Sequence (345 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
217.8 | 1247.4 | 30% | 4.275e-55 | 89% | KM058745.1 | |
69.8 | 866.0 | 27% | 2.771e-22 | 65% | KJ174518.1 | |
69.8 | 866.0 | 27% | 2.771e-22 | 65% | GQ352632.1 | |
69.8 | 866.0 | 27% | 2.771e-22 | 65% | EU259806.1 | |
69.8 | 866.0 | 27% | 2.771e-22 | 65% | KX756668.1 |
Alignments
Grapevine leafroll associated virus 3 isolate GH24, complete genome
Sequence ID: KM058745.1 Length: 18493 Number of Matches: 7
Range 1: 18211 to 18492 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
217.8 bits(469) | 0.0 | 93/94(99%) | 0/94(0%) | Plus/Minus |
Query 4 T*LIVDKLAS*EARLGPNLPLDFGVYCTIYATTILLSTLRTNFTNIRVLNREVEFSHLTSNCDLNYKRVVIIFLLTKCFCFLFDVILITTPRFT 285 T* IVDKLAS*EARLGPNLPLDFGVYCTIYATTILLSTLRTNFTNIRVLNREVEFSHLTSNCDLNYKRVVIIFLLTKCFCFLFDVILITTPRFT Subject 18211 T*PIVDKLAS*EARLGPNLPLDFGVYCTIYATTILLSTLRTNFTNIRVLNREVEFSHLTSNCDLNYKRVVIIFLLTKCFCFLFDVILITTPRFT 18492
Range 2: 18175 to 18492 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
202.2 bits(435) | 0.0 | 95/106(90%) | 0/106(0%) | Minus/Plus |
Query 4 VSRQTNKYMRLFSEARRSN*DDIEKETKTFC**KNNDYSFVV*VAVRGKMTKLYLTV*HSDVCKISP*SR**YCSSVDSTINAKIQW*IGT*AGLL*G*LIDNKLG 321 VS ++L SEARRSN*DDIEKETKTFC**KNNDYSFVV*VAVRGKMTKLYLTV*HSDVCKISP*SR**YCSSVDSTINAKIQW*IGT*AGLL*G*LID++LG Subject 18175 VSYYAYTLVKLCSEARRSN*DDIEKETKTFC**KNNDYSFVV*VAVRGKMTKLYLTV*HSDVCKISP*SR**YCSSVDSTINAKIQW*IGT*AGLL*G*LIDDRLG 18492
Range 3: 18209 to 18493 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
200.4 bits(431) | 0.0 | 93/95(98%) | 0/95(0%) | Minus/Plus |
Query 3 LVKRGVVIKMTSKRKQKHFVSRKIMTTLL*FRSQFEVR*LNSTSRFNTLMFVKLVRKVDSSIVVA*IVQ*TPKSNGKLGPRRASYEANLSTIS*V 287 +VKRGVVIKMTSKRKQKHFVSRKIMTTLL*FRSQFEVR*LNSTSRFNTLMFVKLVRKVDSSIVVA*IVQ*TPKSNGKLGPRRASYEANLSTI *V Subject 18209 VVKRGVVIKMTSKRKQKHFVSRKIMTTLL*FRSQFEVR*LNSTSRFNTLMFVKLVRKVDSSIVVA*IVQ*TPKSNGKLGPRRASYEANLSTIG*V 18493
Range 4: 18212 to 18493 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
199.5 bits(429) | 0.0 | 93/94(99%) | 0/94(0%) | Plus/Minus |
Query 3 DLTYCR*VSLIRGPPRSQFTIGFWXXXXXXXXXNTTIDFTD*FYKHQSVKP*GRV*SSYLELRPKLQKSSHYFSTNKMFLFPFRCHLNYYASLH 284 DLTY R*VSLIRGPPRSQFTIGFWRLLYYLRYYNTTIDFTD*FYKHQSVKP*GRV*SSYLELRPKLQKSSHYFSTNKMFLFPFRCHLNYYASLH Subject 18212 DLTYRR*VSLIRGPPRSQFTIGFWRLLYYLRYYNTTIDFTD*FYKHQSVKP*GRV*SSYLELRPKLQKSSHYFSTNKMFLFPFRCHLNYYASLH 18493
Range 5: 18168 to 18491 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
197.2 bits(424) | 0.0 | 96/108(89%) | 0/108(0%) | Minus/Plus |
Query 5 SVCVSTNQQVYAVV**SEA**LR*HRKGNKNILLVEK**LLFCSLGRSSR*DD*TLPHGLTL*CL*N*SVKSIVVL**RR*YNKRQNPMVNWDLGGPLMRLTYRQ*VR 328 +VC+ V+**SEA**LR*HRKGNKNILLVEK**LLFCSLGRSSR*DD*TLPHGLTL*CL*N*SVKSIVVL**RR*YNKRQNPMVNWDLGGPLMRLTYR+*VR Subject 18168 NVCLLLCLYSSKVM**SEA**LR*HRKGNKNILLVEK**LLFCSLGRSSR*DD*TLPHGLTL*CL*N*SVKSIVVL**RR*YNKRQNPMVNWDLGGPLMRLTYRR*VR 18491
Range 6: 18252 to 18491 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
176.1 bits(378) | 0.0 | 79/80(99%) | 0/80(0%) | Plus/Minus |
Query 5 PNLLSIS*PHKRPA*VPIYHWILAFIVLSTLLQYYYRLYGLILQTSEC*TVR*SLVILPRTAT*TTKE*SLFFY*QNVFV 244 PNL SIS*PHKRPA*VPIYHWILAFIVLSTLLQYYYRLYGLILQTSEC*TVR*SLVILPRTAT*TTKE*SLFFY*QNVFV Subject 18252 PNLSSIS*PHKRPA*VPIYHWILAFIVLSTLLQYYYRLYGLILQTSEC*TVR*SLVILPRTAT*TTKE*SLFFY*QNVFV 18491
Grapevine leafroll associated virus 3, complete genome
Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 15
Range 1: 18260 to 18403 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
69.8 bits(146) | 0.0 | 31/48(65%) | 0/48(0%) | Plus/Minus |
Query 102 NTTIDFTD*FYKHQSVKP*GRV*SSYLELRPKLQKSSHYFSTNKMFLF 245 N TIDFTD*FYK+QS+KP*GRV*SSYLE++P LQK T+ + F Subject 18260 NITIDFTD*FYKYQSIKP*GRV*SSYLEIKPILQKRKTNKKTSLIISF 18403
Range 2: 18413 to 18496 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
58.3 bits(121) | 0.0 | 24/28(86%) | 0/28(0%) | Plus/Minus |
Query 5 PNLLSIS*PHKRPA*VPIYHWILAFIVL 88 PNLLSIS*PHKRPA*VP + WILAFI+L Subject 18413 PNLLSIS*PHKRPA*VPNFDWILAFIIL 18496
Range 3: 18295 to 18414 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
64.3 bits(134) | 0.0 | 30/40(75%) | 0/40(0%) | Minus/Plus |
Query 91 YSFVV*VAVRGKMTKLYLTV*HSDVCKISP*SR**YCSSV 210 + FV *V RGKMTKLYLTV*+SD+CKISP*SR**Y S+ Subject 18295 FVFVE*VLFRGKMTKLYLTV*YSDICKISP*SR**YYISI 18414
Range 4: 18413 to 18496 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
61.6 bits(128) | 0.0 | 25/28(89%) | 0/28(0%) | Minus/Plus |
Query 5 *YNKRQNPMVNWDLGGPLMRLTYRQ*VR 88 *YNKRQNP+ WDLGGPLMRLTYRQ*VR Subject 18413 *YNKRQNPIKVWDLGGPLMRLTYRQ*VR 18496
Range 5: 18301 to 18414 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
67.5 bits(141) | 0.0 | 30/38(79%) | 0/38(0%) | Plus/Minus |
Query 91 YATTILLSTLRTNFTNIRVLNREVEFSHLTSNCDLNYK 204 Y I LSTLRTNFTNIRVLNREVEFSHLTS +L YK Subject 18301 YTNIISLSTLRTNFTNIRVLNREVEFSHLTSK*NLFYK 18414
Range 6: 18427 to 18498 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
56.1 bits(116) | 0.0 | 22/24(92%) | 0/24(0%) | Plus/Minus |
Query 3 DLTYCR*VSLIRGPPRSQFTIGFW 74 DLTYCR*VSLIRGPPRSQ IGFW Subject 18427 DLTYCR*VSLIRGPPRSQTLIGFW 18498
Range 7: 18296 to 18415 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
63.4 bits(132) | 0.0 | 30/40(75%) | 0/40(0%) | Minus/Plus |
Query 90 TLL*FRSQFEVR*LNSTSRFNTLMFVKLVRKVDSSIVVA* 209 + L* R FEVR*LNSTSRFNTL+FVKLVRKVDS I++ * Subject 18296 SFL*NRFYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV* 18415
Range 8: 18412 to 18498 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.7 bits(113) | 0.0 | 26/29(90%) | 0/29(0%) | Minus/Plus |
Query 3 IVQ*TPKSNGKLGPRRASYEANLSTIS*V 89 IV *TPKSN LGPRRASYEANLSTIS*V Subject 18412 IV**TPKSNQSLGPRRASYEANLSTIS*V 18498
Range 9: 18300 to 18425 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
59.3 bits(123) | 0.0 | 28/42(67%) | 0/42(0%) | Plus/Minus |
Query 80 IVLSTLLQYYYRLYGLILQTSEC*TVR*SLVILPRTAT*TTK 205 + + L+ Y+YRLYGLILQ SE *TVR*SLVILPR T +TK Subject 18300 VYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNKTYSTK 18425
Range 10: 18411 to 18497 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.7 bits(113) | 0.0 | 26/29(90%) | 0/29(0%) | Plus/Minus |
Query 4 T*LIVDKLAS*EARLGPNLPLDFGVYCTI 90 T*LIVDKLAS*EARLGP L LDFGVY TI Subject 18411 T*LIVDKLAS*EARLGPKL*LDFGVYYTI 18497
Range 11: 18255 to 18404 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
58.8 bits(122) | 0.0 | 33/50(66%) | 0/50(0%) | Minus/Plus |
Query 101 KGNKNILLVEK**LLFCSLGRSSR*DD*TLPHGLTL*CL*N*SVKSIVVL 250 K N+ I LV FC +G SR*DD*TLPHGL L* L*N*SVKSIV+L Subject 18255 KKNEIIRLVFLFVFRFCRIGFISR*DD*TLPHGLIL*YL*N*SVKSIVIL 18404
Range 12: 18414 to 18497 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
47.3 bits(97) | 0.0 | 24/28(86%) | 0/28(0%) | Minus/Plus |
Query 4 STINAKIQW*IGT*AGLL*G*LIDNKLG 87 S INAKIQ GT*AGLL*G*LIDNKLG Subject 18414 SIINAKIQSKFGT*AGLL*G*LIDNKLG 18497
Range 13: 7269 to 7334 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.2 bits(112) | 0.0 | 22/22(100%) | 0/22(0%) | Plus/Plus |
Query 280 FTKQPHILVGLSRHTRSLVYAA 345 FTKQPHILVGLSRHTRSLVYAA Subject 7269 FTKQPHILVGLSRHTRSLVYAA 7334
Grapevine leafroll associated virus 3 isolate 623, complete genome
Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 15
Range 1: 18260 to 18403 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
69.8 bits(146) | 0.0 | 31/48(65%) | 0/48(0%) | Plus/Minus |
Query 102 NTTIDFTD*FYKHQSVKP*GRV*SSYLELRPKLQKSSHYFSTNKMFLF 245 N TIDFTD*FYK+QS+KP*GRV*SSYLE++P LQK T+ + F Subject 18260 NITIDFTD*FYKYQSIKP*GRV*SSYLEIKPILQKRKTNKKTSLIISF 18403
Range 2: 18413 to 18496 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
58.3 bits(121) | 0.0 | 24/28(86%) | 0/28(0%) | Plus/Minus |
Query 5 PNLLSIS*PHKRPA*VPIYHWILAFIVL 88 PNLLSIS*PHKRPA*VP + WILAFI+L Subject 18413 PNLLSIS*PHKRPA*VPNFDWILAFIIL 18496
Range 3: 18295 to 18414 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
64.3 bits(134) | 0.0 | 30/40(75%) | 0/40(0%) | Minus/Plus |
Query 91 YSFVV*VAVRGKMTKLYLTV*HSDVCKISP*SR**YCSSV 210 + FV *V RGKMTKLYLTV*+SD+CKISP*SR**Y S+ Subject 18295 FVFVE*VLFRGKMTKLYLTV*YSDICKISP*SR**YYISI 18414
Range 4: 18413 to 18496 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
61.6 bits(128) | 0.0 | 25/28(89%) | 0/28(0%) | Minus/Plus |
Query 5 *YNKRQNPMVNWDLGGPLMRLTYRQ*VR 88 *YNKRQNP+ WDLGGPLMRLTYRQ*VR Subject 18413 *YNKRQNPIKVWDLGGPLMRLTYRQ*VR 18496
Range 5: 18301 to 18414 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
67.5 bits(141) | 0.0 | 30/38(79%) | 0/38(0%) | Plus/Minus |
Query 91 YATTILLSTLRTNFTNIRVLNREVEFSHLTSNCDLNYK 204 Y I LSTLRTNFTNIRVLNREVEFSHLTS +L YK Subject 18301 YTNIISLSTLRTNFTNIRVLNREVEFSHLTSK*NLFYK 18414
Range 6: 18427 to 18498 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
56.1 bits(116) | 0.0 | 22/24(92%) | 0/24(0%) | Plus/Minus |
Query 3 DLTYCR*VSLIRGPPRSQFTIGFW 74 DLTYCR*VSLIRGPPRSQ IGFW Subject 18427 DLTYCR*VSLIRGPPRSQTLIGFW 18498
Range 7: 18296 to 18415 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
63.4 bits(132) | 0.0 | 30/40(75%) | 0/40(0%) | Minus/Plus |
Query 90 TLL*FRSQFEVR*LNSTSRFNTLMFVKLVRKVDSSIVVA* 209 + L* R FEVR*LNSTSRFNTL+FVKLVRKVDS I++ * Subject 18296 SFL*NRFYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV* 18415
Range 8: 18412 to 18498 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.7 bits(113) | 0.0 | 26/29(90%) | 0/29(0%) | Minus/Plus |
Query 3 IVQ*TPKSNGKLGPRRASYEANLSTIS*V 89 IV *TPKSN LGPRRASYEANLSTIS*V Subject 18412 IV**TPKSNQSLGPRRASYEANLSTIS*V 18498
Range 9: 18300 to 18425 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
59.3 bits(123) | 0.0 | 28/42(67%) | 0/42(0%) | Plus/Minus |
Query 80 IVLSTLLQYYYRLYGLILQTSEC*TVR*SLVILPRTAT*TTK 205 + + L+ Y+YRLYGLILQ SE *TVR*SLVILPR T +TK Subject 18300 VYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNKTYSTK 18425
Range 10: 18411 to 18497 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.7 bits(113) | 0.0 | 26/29(90%) | 0/29(0%) | Plus/Minus |
Query 4 T*LIVDKLAS*EARLGPNLPLDFGVYCTI 90 T*LIVDKLAS*EARLGP L LDFGVY TI Subject 18411 T*LIVDKLAS*EARLGPKL*LDFGVYYTI 18497
Range 11: 18255 to 18404 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
58.8 bits(122) | 0.0 | 33/50(66%) | 0/50(0%) | Minus/Plus |
Query 101 KGNKNILLVEK**LLFCSLGRSSR*DD*TLPHGLTL*CL*N*SVKSIVVL 250 K N+ I LV FC +G SR*DD*TLPHGL L* L*N*SVKSIV+L Subject 18255 KKNEIIRLVFLFVFRFCRIGFISR*DD*TLPHGLIL*YL*N*SVKSIVIL 18404
Range 12: 18414 to 18497 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
47.3 bits(97) | 0.0 | 24/28(86%) | 0/28(0%) | Minus/Plus |
Query 4 STINAKIQW*IGT*AGLL*G*LIDNKLG 87 S INAKIQ GT*AGLL*G*LIDNKLG Subject 18414 SIINAKIQSKFGT*AGLL*G*LIDNKLG 18497
Range 13: 7269 to 7334 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.2 bits(112) | 0.0 | 22/22(100%) | 0/22(0%) | Plus/Plus |
Query 280 FTKQPHILVGLSRHTRSLVYAA 345 FTKQPHILVGLSRHTRSLVYAA Subject 7269 FTKQPHILVGLSRHTRSLVYAA 7334
Grapevine leafroll associated virus 3 isolate GP18, complete genome
Sequence ID: EU259806.1 Length: 18498 Number of Matches: 15
Range 1: 18260 to 18403 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
69.8 bits(146) | 0.0 | 31/48(65%) | 0/48(0%) | Plus/Minus |
Query 102 NTTIDFTD*FYKHQSVKP*GRV*SSYLELRPKLQKSSHYFSTNKMFLF 245 N TIDFTD*FYK+QS+KP*GRV*SSYLE++P LQK T+ + F Subject 18260 NITIDFTD*FYKYQSIKP*GRV*SSYLEIKPILQKRKTNKKTSLIISF 18403
Range 2: 18413 to 18496 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
58.3 bits(121) | 0.0 | 24/28(86%) | 0/28(0%) | Plus/Minus |
Query 5 PNLLSIS*PHKRPA*VPIYHWILAFIVL 88 PNLLSIS*PHKRPA*VP + WILAFI+L Subject 18413 PNLLSIS*PHKRPA*VPNFDWILAFIIL 18496
Range 3: 18295 to 18414 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
64.3 bits(134) | 0.0 | 30/40(75%) | 0/40(0%) | Minus/Plus |
Query 91 YSFVV*VAVRGKMTKLYLTV*HSDVCKISP*SR**YCSSV 210 + FV *V RGKMTKLYLTV*+SD+CKISP*SR**Y S+ Subject 18295 FVFVE*VLFRGKMTKLYLTV*YSDICKISP*SR**YYISI 18414
Range 4: 18413 to 18496 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
61.6 bits(128) | 0.0 | 25/28(89%) | 0/28(0%) | Minus/Plus |
Query 5 *YNKRQNPMVNWDLGGPLMRLTYRQ*VR 88 *YNKRQNP+ WDLGGPLMRLTYRQ*VR Subject 18413 *YNKRQNPIKVWDLGGPLMRLTYRQ*VR 18496
Range 5: 18301 to 18414 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
67.5 bits(141) | 0.0 | 30/38(79%) | 0/38(0%) | Plus/Minus |
Query 91 YATTILLSTLRTNFTNIRVLNREVEFSHLTSNCDLNYK 204 Y I LSTLRTNFTNIRVLNREVEFSHLTS +L YK Subject 18301 YTNIISLSTLRTNFTNIRVLNREVEFSHLTSK*NLFYK 18414
Range 6: 18427 to 18498 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
56.1 bits(116) | 0.0 | 22/24(92%) | 0/24(0%) | Plus/Minus |
Query 3 DLTYCR*VSLIRGPPRSQFTIGFW 74 DLTYCR*VSLIRGPPRSQ IGFW Subject 18427 DLTYCR*VSLIRGPPRSQTLIGFW 18498
Range 7: 18296 to 18415 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
63.4 bits(132) | 0.0 | 30/40(75%) | 0/40(0%) | Minus/Plus |
Query 90 TLL*FRSQFEVR*LNSTSRFNTLMFVKLVRKVDSSIVVA* 209 + L* R FEVR*LNSTSRFNTL+FVKLVRKVDS I++ * Subject 18296 SFL*NRFYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV* 18415
Range 8: 18412 to 18498 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.7 bits(113) | 0.0 | 26/29(90%) | 0/29(0%) | Minus/Plus |
Query 3 IVQ*TPKSNGKLGPRRASYEANLSTIS*V 89 IV *TPKSN LGPRRASYEANLSTIS*V Subject 18412 IV**TPKSNQSLGPRRASYEANLSTIS*V 18498
Range 9: 18300 to 18425 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
59.3 bits(123) | 0.0 | 28/42(67%) | 0/42(0%) | Plus/Minus |
Query 80 IVLSTLLQYYYRLYGLILQTSEC*TVR*SLVILPRTAT*TTK 205 + + L+ Y+YRLYGLILQ SE *TVR*SLVILPR T +TK Subject 18300 VYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNKTYSTK 18425
Range 10: 18411 to 18497 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.7 bits(113) | 0.0 | 26/29(90%) | 0/29(0%) | Plus/Minus |
Query 4 T*LIVDKLAS*EARLGPNLPLDFGVYCTI 90 T*LIVDKLAS*EARLGP L LDFGVY TI Subject 18411 T*LIVDKLAS*EARLGPKL*LDFGVYYTI 18497
Range 11: 18255 to 18404 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
58.8 bits(122) | 0.0 | 33/50(66%) | 0/50(0%) | Minus/Plus |
Query 101 KGNKNILLVEK**LLFCSLGRSSR*DD*TLPHGLTL*CL*N*SVKSIVVL 250 K N+ I LV FC +G SR*DD*TLPHGL L* L*N*SVKSIV+L Subject 18255 KKNEIIRLVFLFVFRFCRIGFISR*DD*TLPHGLIL*YL*N*SVKSIVIL 18404
Range 12: 18414 to 18497 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
47.3 bits(97) | 0.0 | 24/28(86%) | 0/28(0%) | Minus/Plus |
Query 4 STINAKIQW*IGT*AGLL*G*LIDNKLG 87 S INAKIQ GT*AGLL*G*LIDNKLG Subject 18414 SIINAKIQSKFGT*AGLL*G*LIDNKLG 18497
Range 13: 7269 to 7334 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.2 bits(112) | 0.0 | 22/22(100%) | 0/22(0%) | Plus/Plus |
Query 280 FTKQPHILVGLSRHTRSLVYAA 345 FTKQPHILVGLSRHTRSLVYAA Subject 7269 FTKQPHILVGLSRHTRSLVYAA 7334
Grapevine leafroll associated virus 3 isolate TC BR, complete genome
Sequence ID: KX756668.1 Length: 18498 Number of Matches: 15
Range 1: 18260 to 18403 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
69.8 bits(146) | 0.0 | 31/48(65%) | 0/48(0%) | Plus/Minus |
Query 102 NTTIDFTD*FYKHQSVKP*GRV*SSYLELRPKLQKSSHYFSTNKMFLF 245 N TIDFTD*FYK+QS+KP*GRV*SSYLE++P LQK T+ + F Subject 18260 NITIDFTD*FYKYQSIKP*GRV*SSYLEIKPILQKRKTNKKTSLIISF 18403
Range 2: 18413 to 18496 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
58.3 bits(121) | 0.0 | 24/28(86%) | 0/28(0%) | Plus/Minus |
Query 5 PNLLSIS*PHKRPA*VPIYHWILAFIVL 88 PNLLSIS*PHKRPA*VP + WILAFI+L Subject 18413 PNLLSIS*PHKRPA*VPNFDWILAFIIL 18496
Range 3: 18295 to 18414 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
64.3 bits(134) | 0.0 | 30/40(75%) | 0/40(0%) | Minus/Plus |
Query 91 YSFVV*VAVRGKMTKLYLTV*HSDVCKISP*SR**YCSSV 210 + FV *V RGKMTKLYLTV*+SD+CKISP*SR**Y S+ Subject 18295 FVFVE*VLFRGKMTKLYLTV*YSDICKISP*SR**YYISI 18414
Range 4: 18413 to 18496 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
61.6 bits(128) | 0.0 | 25/28(89%) | 0/28(0%) | Minus/Plus |
Query 5 *YNKRQNPMVNWDLGGPLMRLTYRQ*VR 88 *YNKRQNP+ WDLGGPLMRLTYRQ*VR Subject 18413 *YNKRQNPIKVWDLGGPLMRLTYRQ*VR 18496
Range 5: 18301 to 18414 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
67.5 bits(141) | 0.0 | 30/38(79%) | 0/38(0%) | Plus/Minus |
Query 91 YATTILLSTLRTNFTNIRVLNREVEFSHLTSNCDLNYK 204 Y I LSTLRTNFTNIRVLNREVEFSHLTS +L YK Subject 18301 YTNIISLSTLRTNFTNIRVLNREVEFSHLTSK*NLFYK 18414
Range 6: 18427 to 18498 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
56.1 bits(116) | 0.0 | 22/24(92%) | 0/24(0%) | Plus/Minus |
Query 3 DLTYCR*VSLIRGPPRSQFTIGFW 74 DLTYCR*VSLIRGPPRSQ IGFW Subject 18427 DLTYCR*VSLIRGPPRSQTLIGFW 18498
Range 7: 18296 to 18415 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
63.4 bits(132) | 0.0 | 30/40(75%) | 0/40(0%) | Minus/Plus |
Query 90 TLL*FRSQFEVR*LNSTSRFNTLMFVKLVRKVDSSIVVA* 209 + L* R FEVR*LNSTSRFNTL+FVKLVRKVDS I++ * Subject 18296 SFL*NRFYFEVR*LNSTSRFNTLIFVKLVRKVDSDIILV* 18415
Range 8: 18412 to 18498 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.7 bits(113) | 0.0 | 26/29(90%) | 0/29(0%) | Minus/Plus |
Query 3 IVQ*TPKSNGKLGPRRASYEANLSTIS*V 89 IV *TPKSN LGPRRASYEANLSTIS*V Subject 18412 IV**TPKSNQSLGPRRASYEANLSTIS*V 18498
Range 9: 18300 to 18425 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
59.3 bits(123) | 0.0 | 28/42(67%) | 0/42(0%) | Plus/Minus |
Query 80 IVLSTLLQYYYRLYGLILQTSEC*TVR*SLVILPRTAT*TTK 205 + + L+ Y+YRLYGLILQ SE *TVR*SLVILPR T +TK Subject 18300 VYYTILI*YHYRLYGLILQISEY*TVR*SLVILPRNKTYSTK 18425
Range 10: 18411 to 18497 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.7 bits(113) | 0.0 | 26/29(90%) | 0/29(0%) | Plus/Minus |
Query 4 T*LIVDKLAS*EARLGPNLPLDFGVYCTI 90 T*LIVDKLAS*EARLGP L LDFGVY TI Subject 18411 T*LIVDKLAS*EARLGPKL*LDFGVYYTI 18497
Range 11: 18255 to 18404 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
58.8 bits(122) | 0.0 | 33/50(66%) | 0/50(0%) | Minus/Plus |
Query 101 KGNKNILLVEK**LLFCSLGRSSR*DD*TLPHGLTL*CL*N*SVKSIVVL 250 K N+ I LV FC +G SR*DD*TLPHGL L* L*N*SVKSIV+L Subject 18255 KKNEIIRLVFLFVFRFCRIGFISR*DD*TLPHGLIL*YL*N*SVKSIVIL 18404
Range 12: 18414 to 18497 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
47.3 bits(97) | 0.0 | 24/28(86%) | 0/28(0%) | Minus/Plus |
Query 4 STINAKIQW*IGT*AGLL*G*LIDNKLG 87 S INAKIQ GT*AGLL*G*LIDNKLG Subject 18414 SIINAKIQSKFGT*AGLL*G*LIDNKLG 18497
Range 13: 7269 to 7334 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.2 bits(112) | 0.0 | 22/22(100%) | 0/22(0%) | Plus/Plus |
Query 280 FTKQPHILVGLSRHTRSLVYAA 345 FTKQPHILVGLSRHTRSLVYAA Subject 7269 FTKQPHILVGLSRHTRSLVYAA 7334
Nucleotide Sequence (752 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
573.4 | 3042.8 | 26% | 1.234e-161 | 94% | KJ174518.1 | |
569.7 | 3015.3 | 26% | 1.567e-160 | 94% | EU259806.1 | |
566.0 | 3010.3 | 26% | 1.988e-159 | 94% | KX756668.1 | |
565.6 | 2990.6 | 26% | 2.731e-159 | 94% | KX701860.1 | |
564.7 | 2981.4 | 26% | 5.155e-159 | 92% | HQ130284.1 |
Alignments
Grapevine leafroll associated virus 3, complete genome
Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 11
Range 1: 17577 to 18326 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
573.4 bits(1245) | 0.0 | 244/250(98%) | 0/250(0%) | Plus/Minus |
Query 1 PRNITYSTKTKNEQKD*PNYFIFLTFLYFKFIEGFLPITGC*TFSFSTYAN*SIQIVTNKHSD*RYAYKYIPPVTNVTSHDAIVYRYSDGFF*VPHRLLQKQTISTANKHAQVSNVNCNPFKDLTTAEQHNISTALRNKASRSTS*RSHSLKYTHYH*LDNSFVVCLLPQLRSVRSELALYVCQSIDHLSIQDIFYFPSFHDTLRITPST**LPEHLLNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA 750 PRN TYSTKTKNEQKD*PNYFIFLTFLYFKFIEGFLPITGC*TFSFSTYAN*SIQIVTNKHSD*RYAYKYIPPVTNVTSHDAIVYRYSDGFF*VPHRLLQK TISTANKHAQ+SNVNCNPF+DLTTA QHNISTALRNKASRSTS*RSHSLKYTHYH*LDNSFVVCLLPQLRSVRSELALYVCQSIDHLSIQDIFYFPSFHDTLRITPST**LPEHLLNV*ANL*LCPPNTPLG KRRRSLYCQ*ELFYA Subject 17577 PRNKTYSTKTKNEQKD*PNYFIFLTFLYFKFIEGFLPITGC*TFSFSTYAN*SIQIVTNKHSD*RYAYKYIPPVTNVTSHDAIVYRYSDGFF*VPHRLLQKLTISTANKHAQISNVNCNPFEDLTTA*QHNISTALRNKASRSTS*RSHSLKYTHYH*LDNSFVVCLLPQLRSVRSELALYVCQSIDHLSIQDIFYFPSFHDTLRITPST**LPEHLLNV*ANL*LCPPNTPLGRKRRRSLYCQ*ELFYA 18326
Range 2: 17576 to 18076 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
380.9 bits(825) | 0.0 | 163/167(98%) | 0/167(0%) | Minus/Plus |
Query 251 LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKKYLGYLSDQCSGKRIMLTQTGLTAVEEADILRTNYLVSGNGYISNCGIARMLILTLCCGAL*KCCVVQPLSNL*TGYS*RYLLAHVC*RC*LSAFVEGDEALRKTHQSSGT 751 LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKKYLGYLSDQC GKRIMLTQTGLTAVEEADILRTNYLVSGNGYISNCGIARMLILTLCCGAL*KCCVV+PLSNL TGYS*RYL AHVC*RC*LSAFVEGDEALRKTHQSSGT Subject 17576 LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKKYLGYLSDQCFGKRIMLTQTGLTAVEEADILRTNYLVSGNGYISNCGIARMLILTLCCGAL*KCCVVKPLSNLQTGYS*RYLFAHVC*RC*LSAFVEGDEALRKTHQSSGT 18076
Range 3: 18110 to 18325 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
161.0 bits(345) | 0.0 | 70/72(97%) | 0/72(0%) | Minus/Plus |
Query 2 VGCIYRRNVNRYVY*LLFVCSNWHM*KKRRFNNQ*WVKILQ*I*NKEK*EK*NN*ASLFVRFSFL*NRLYFE 217 VGCIYRRNVNRYVY*LLFVCSNWHM*K+RRFNNQ*WVKILQ*I*NKEK*EK*NN*ASLFVRFSFL*NR YFE Subject 18110 VGCIYRRNVNRYVY*LLFVCSNWHM*KRRRFNNQ*WVKILQ*I*NKEK*EK*NN*ASLFVRFSFL*NRFYFE 18325
Range 4: 17576 to 18229 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
485.9 bits(1054) | 0.0 | 212/218(97%) | 0/218(0%) | Plus/Minus |
Query 98 KDFYPLLVVKPSLFLHMPIRAYK**LINIAINVTPINTSHPSQTSLRTTQ*CTATLMGFSKCLIAFYKSRQLAPLTNMRK*VTLTVTRLKI*QRLNNTTFLQRSATKRQDQHPSDPTV*NIPITTD*IIRS*YVCFLNCGQSGLS*HYTFARALIT*VSKIFFTSPLSTTHFE*LHRLDDFQNIF*MFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ 751 KDFYPLLVVKPS FLHMPIRAYK**LINIAINVTPINTSHPSQTSLRTTQ*CTATLMGFSKCLIAFYKS QLAPLTNMRK*VTLTVTRLKI*QRL+NTTFLQRSATKRQDQHPSDPTV*NIPITTD*IIRS*YVCFLNCGQSGLS*HYTFA+ALIT*VSKIFFTSPLSTTHFE*LHRLDDFQNIF*MFKQTSSYAHQTPHLV+SEGGVYTVN+NCSMQ Subject 17576 KDFYPLLVVKPSPFLHMPIRAYK**LINIAINVTPINTSHPSQTSLRTTQ*CTATLMGFSKCLIAFYKS*QLAPLTNMRK*VTLTVTRLKI*QRLDNTTFLQRSATKRQDQHPSDPTV*NIPITTD*IIRS*YVCFLNCGQSGLS*HYTFAKALIT*VSKIFFTSPLSTTHFE*LHRLDDFQNIF*MFKQTSSYAHQTPHLVVSEGGVYTVNKNCSMQ 18229
Range 5: 18274 to 18324 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
38.2 bits(77) | 0.0 | 16/17(94%) | 0/17(0%) | Plus/Minus |
Query 3 SKYNLFYKNEKRTKRLA 53 SK NLFYKNEKRTKRLA Subject 18274 SK*NLFYKNEKRTKRLA 18324
Range 6: 17577 to 18218 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
488.6 bits(1060) | 0.0 | 209/214(98%) | 0/214(0%) | Minus/Plus |
Query 109 CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIQKMFWKSSSRWSYSKCVVERGEVKNILDT*VINALANV*C*LRPD*PQLRKQTYYERII*SVVMGIFQTVGSLGC*S*RFVAERCRNVVLFSRCQIFKRVTVNVTYLRMFVSGANCLLL*KAMRHLEKPIRVAVHYCVVRSDVCDGWDVFIGVTLIAMFISYYLYALIGICRKREGLTTSNG 750 CIEQF LTV*TPPSL TKWGVWWA*LEVCLNIQKMFWKSSSRWSYSKCVVERGEVKNILDT*VINALANV*C*LRPD*PQLRKQTYYERII*SVVMGIFQTVGSLGC*S*RFVAERCRNVVL SRCQIFKRVTVNVTYLRMFVSGANC LL*KAMRHLEKPIRVAVHYCVVRSDVCDGWDVFIGVTLIAMFISYYLYALIGICRK EGLTTSNG Subject 17577 CIEQFLLTV*TPPSLTTKWGVWWA*LEVCLNIQKMFWKSSSRWSYSKCVVERGEVKNILDT*VINALANV*C*LRPD*PQLRKQTYYERII*SVVMGIFQTVGSLGC*S*RFVAERCRNVVLSSRCQIFKRVTVNVTYLRMFVSGANCQLL*KAMRHLEKPIRVAVHYCVVRSDVCDGWDVFIGVTLIAMFISYYLYALIGICRKGEGLTTSNG 18218
Range 7: 17842 to 18228 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
287.9 bits(622) | 0.0 | 126/129(98%) | 0/129(0%) | Plus/Minus |
Query 99 RIFTHYWLLNLLFFYICQLEHTNSN**T*RLTLRL*IHPTRHKRHFARRNSVPLL*WVFLSASSPSTKADN*HR*QTCASK*R*L*PV*RFDNG*TTQHFYSAPQQSVKINILAIPQFEIYPLPLTR*F 485 RIFTHYWLLNLL FYICQLEHTNSN**T*RLTLRL*IHPTRHKRHFARRNSVPLL*WVFLSASSPSTKADN*HR*QTCA+K*R*L*PV*RFDNG TTQHFYSAPQQSVKINILAIPQFEIYPLPLTR*F Subject 17842 RIFTHYWLLNLLLFYICQLEHTNSN**T*RLTLRL*IHPTRHKRHFARRNSVPLL*WVFLSASSPSTKADN*HR*QTCANK*R*L*PV*RFDNGLTTQHFYSAPQQSVKINILAIPQFEIYPLPLTR*F 18228
Range 8: 17575 to 17790 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
167.9 bits(360) | 0.0 | 70/72(97%) | 0/72(0%) | Plus/Minus |
Query 537 IIRLPEH*SLKYPRYFLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS 752 IIRLP+H*SLKYPRYFLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILS+RIVLCS Subject 17575 IIRLPKH*SLKYPRYFLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSIRIVLCS 17790
Range 9: 18278 to 18325 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
35.0 bits(70) | 0.0 | 15/16(94%) | 0/16(0%) | Plus/Minus |
Query 2 LEI*PILQKRKTNKKT 49 LEI PILQKRKTNKKT Subject 18278 LEIKPILQKRKTNKKT 18325
Range 10: 17575 to 17877 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
231.5 bits(499) | 0.0 | 99/101(98%) | 0/101(0%) | Minus/Plus |
Query 450 AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFRRCSGSHQVDGVIRSVSWKEGK*KISWILK*SMLWQTYNANSDRTDRS*GSRHTTNELSSQW*WVYFK 752 AA*NNS+*QYRLRLRL PSGVFGGHS*RFA*TFRRCSGSHQVDGVIRSVSWKEGK*KISWILK*SMLWQTYNANSDRTDRS*GSRHTTNELSSQW*WVYFK Subject 17575 AA*NNSY*QYRLRLRLRPSGVFGGHS*RFA*TFRRCSGSHQVDGVIRSVSWKEGK*KISWILK*SMLWQTYNANSDRTDRS*GSRHTTNELSSQW*WVYFK 17877
Range 11: 17917 to 18240 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
192.6 bits(414) | 0.0 | 104/108(96%) | 0/108(0%) | Minus/Plus |
Query 87 RSAVEMLCCSAVVKSLNGXXXXXXXXXXXXXXLIVCFCRRR*GT*KNPSE*RYTIASCEVTFVTGGMYL*A*R*SLCLLVTICML*LAYVEKEKV*QPVMGKNPSINL 410 RSAVEMLCC AVVKS NGLQLTLL CACLLAVLIV FCRRR*GT*KNPSE*RYTIASCEVTFVTGGMYL*A*R*SLCLLVTICML*LAYVEKEKV*QPVMGKNPSINL Subject 17917 RSAVEMLCCQAVVKSSNGLQLTLLICACLLAVLIVSFCRRR*GT*KNPSE*RYTIASCEVTFVTGGMYL*A*R*SLCLLVTICML*LAYVEKEKV*QPVMGKNPSINL 18240
Grapevine leafroll associated virus 3 isolate GP18, complete genome
Sequence ID: EU259806.1 Length: 18498 Number of Matches: 11
Range 1: 17577 to 18326 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
569.7 bits(1237) | 0.0 | 243/250(97%) | 0/250(0%) | Plus/Minus |
Query 1 PRNITYSTKTKNEQKD*PNYFIFLTFLYFKFIEGFLPITGC*TFSFSTYAN*SIQIVTNKHSD*RYAYKYIPPVTNVTSHDAIVYRYSDGFF*VPHRLLQKQTISTANKHAQVSNVNCNPFKDLTTAEQHNISTALRNKASRSTS*RSHSLKYTHYH*LDNSFVVCLLPQLRSVRSELALYVCQSIDHLSIQDIFYFPSFHDTLRITPST**LPEHLLNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA 750 PRN TYSTKTKNEQKD*PNYFIFLTFLYFKFIEGFLPITGC*TFSFSTYAN*SIQIVTNKHSD*RYAYKYIPPVTNVTSHDAIVYRYSD FF*VPHRLLQK TISTANKHAQ+SNVNCNPF+DLTTA QHNISTALRNKASRSTS*RSHSLKYTHYH*LDNSFVVCLLPQLRSVRSELALYVCQSIDHLSIQDIFYFPSFHDTLRITPST**LPEHLLNV*ANL*LCPPNTPLG KRRRSLYCQ*ELFYA Subject 17577 PRNKTYSTKTKNEQKD*PNYFIFLTFLYFKFIEGFLPITGC*TFSFSTYAN*SIQIVTNKHSD*RYAYKYIPPVTNVTSHDAIVYRYSDWFF*VPHRLLQKLTISTANKHAQISNVNCNPFEDLTTA*QHNISTALRNKASRSTS*RSHSLKYTHYH*LDNSFVVCLLPQLRSVRSELALYVCQSIDHLSIQDIFYFPSFHDTLRITPST**LPEHLLNV*ANL*LCPPNTPLGRKRRRSLYCQ*ELFYA 18326
Range 2: 17576 to 18076 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
378.2 bits(819) | 0.0 | 162/167(97%) | 0/167(0%) | Minus/Plus |
Query 251 LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKKYLGYLSDQCSGKRIMLTQTGLTAVEEADILRTNYLVSGNGYISNCGIARMLILTLCCGAL*KCCVVQPLSNL*TGYS*RYLLAHVC*RC*LSAFVEGDEALRKTHQSSGT 751 LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKKYLGYLSDQCSGK IMLTQTGLTAVEEADILRTNYLVSGNGYISNCGIARMLILTLCCGAL*KCCVV+PLSNL TGYS*RYL AHVC*RC*LSAFVEGDEALRKT+QSSGT Subject 17576 LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKKYLGYLSDQCSGKHIMLTQTGLTAVEEADILRTNYLVSGNGYISNCGIARMLILTLCCGAL*KCCVVKPLSNLQTGYS*RYLFAHVC*RC*LSAFVEGDEALRKTNQSSGT 18076
Range 3: 18110 to 18325 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
158.2 bits(339) | 0.0 | 69/72(96%) | 0/72(0%) | Minus/Plus |
Query 2 VGCIYRRNVNRYVY*LLFVCSNWHM*KKRRFNNQ*WVKILQ*I*NKEK*EK*NN*ASLFVRFSFL*NRLYFE 217 VGCIYRRNVNRYVY*LLFVC NWHM*K+RRFNNQ*WVKILQ*I*NKEK*EK*NN*ASLFVRFSFL*NR YFE Subject 18110 VGCIYRRNVNRYVY*LLFVCFNWHM*KRRRFNNQ*WVKILQ*I*NKEK*EK*NN*ASLFVRFSFL*NRFYFE 18325
Range 4: 17576 to 18229 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
481.3 bits(1044) | 0.0 | 210/218(96%) | 0/218(0%) | Plus/Minus |
Query 98 KDFYPLLVVKPSLFLHMPIRAYK**LINIAINVTPINTSHPSQTSLRTTQ*CTATLMGFSKCLIAFYKSRQLAPLTNMRK*VTLTVTRLKI*QRLNNTTFLQRSATKRQDQHPSDPTV*NIPITTD*IIRS*YVCFLNCGQSGLS*HYTFARALIT*VSKIFFTSPLSTTHFE*LHRLDDFQNIF*MFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ 751 KDFYPLLVVKPS FLHMPI+AYK**LINIAINVTPINTSHPSQTSLRTTQ*CTATL+GFSKCLIAFYKS QLAPLTNMRK*VTLTVTRLKI*QRL+NTTFLQRSATKRQDQHPSDPTV*NIPITTD*IIRS*YVCFLNCGQSGLS*HY FARALIT*VSKIFFTSPLSTTHFE*LHRLDDFQNIF*MFKQTSSYAHQTPHLV+SEGGVYTVN+NCSMQ Subject 17576 KDFYPLLVVKPSPFLHMPIKAYK**LINIAINVTPINTSHPSQTSLRTTQ*CTATLIGFSKCLIAFYKS*QLAPLTNMRK*VTLTVTRLKI*QRLDNTTFLQRSATKRQDQHPSDPTV*NIPITTD*IIRS*YVCFLNCGQSGLS*HYMFARALIT*VSKIFFTSPLSTTHFE*LHRLDDFQNIF*MFKQTSSYAHQTPHLVVSEGGVYTVNKNCSMQ 18229
Range 5: 18274 to 18324 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
38.2 bits(77) | 0.0 | 16/17(94%) | 0/17(0%) | Plus/Minus |
Query 3 SKYNLFYKNEKRTKRLA 53 SK NLFYKNEKRTKRLA Subject 18274 SK*NLFYKNEKRTKRLA 18324
Range 6: 17577 to 18218 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
488.1 bits(1059) | 0.0 | 208/214(97%) | 0/214(0%) | Minus/Plus |
Query 109 CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIQKMFWKSSSRWSYSKCVVERGEVKNILDT*VINALANV*C*LRPD*PQLRKQTYYERII*SVVMGIFQTVGSLGC*S*RFVAERCRNVVLFSRCQIFKRVTVNVTYLRMFVSGANCLLL*KAMRHLEKPIRVAVHYCVVRSDVCDGWDVFIGVTLIAMFISYYLYALIGICRKREGLTTSNG 750 CIEQF LTV*TPPSL TKWGVWWA*LEVCLNIQKMFWKSSSRWSYSKCVVERGEVKNILDT*VINALAN+*C*LRPD*PQLRKQTYYERII*SVVMGIFQTVGSLGC*S*RFVAERCRNVVL SRCQIFKRVTVNVTYLRMFVSGANC LL*KAMRHLEKPIRVAVHYCVVRSDVCDGWDVFIGVTLIAMFISYYLYALIGICRK EGLTTSNG Subject 17577 CIEQFLLTV*TPPSLTTKWGVWWA*LEVCLNIQKMFWKSSSRWSYSKCVVERGEVKNILDT*VINALANI*C*LRPD*PQLRKQTYYERII*SVVMGIFQTVGSLGC*S*RFVAERCRNVVLSSRCQIFKRVTVNVTYLRMFVSGANCQLL*KAMRHLEKPIRVAVHYCVVRSDVCDGWDVFIGVTLIAMFISYYLYALIGICRKGEGLTTSNG 18218
Range 7: 17842 to 18228 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
280.1 bits(605) | 0.0 | 124/129(96%) | 0/129(0%) | Plus/Minus |
Query 99 RIFTHYWLLNLLFFYICQLEHTNSN**T*RLTLRL*IHPTRHKRHFARRNSVPLL*WVFLSASSPSTKADN*HR*QTCASK*R*L*PV*RFDNG*TTQHFYSAPQQSVKINILAIPQFEIYPLPLTR*F 485 RIFTHYWLLNLL FYICQL+HTNSN**T*RLTLRL*IHPTRHKRHFARRNSVPLL* VFLSASSPSTKADN*HR*QTCA+K*R*L*PV*RFDNG TTQHFYSAPQQSVKINILAIPQFEIYPLPLTR*F Subject 17842 RIFTHYWLLNLLLFYICQLKHTNSN**T*RLTLRL*IHPTRHKRHFARRNSVPLL*LVFLSASSPSTKADN*HR*QTCANK*R*L*PV*RFDNGLTTQHFYSAPQQSVKINILAIPQFEIYPLPLTR*F 18228
Range 8: 17575 to 17790 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
166.0 bits(356) | 0.0 | 70/72(97%) | 0/72(0%) | Plus/Minus |
Query 537 IIRLPEH*SLKYPRYFLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS 752 II LPEH*SLKYPRYFLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILS+RIVLCS Subject 17575 IICLPEH*SLKYPRYFLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSIRIVLCS 17790
Range 9: 18278 to 18325 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
35.0 bits(70) | 0.0 | 15/16(94%) | 0/16(0%) | Plus/Minus |
Query 2 LEI*PILQKRKTNKKT 49 LEI PILQKRKTNKKT Subject 18278 LEIKPILQKRKTNKKT 18325
Range 10: 17575 to 17877 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
231.5 bits(499) | 0.0 | 99/101(98%) | 0/101(0%) | Minus/Plus |
Query 450 AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFRRCSGSHQVDGVIRSVSWKEGK*KISWILK*SMLWQTYNANSDRTDRS*GSRHTTNELSSQW*WVYFK 752 AA*NNS+*QYRLRLRL PSGVFGGHS*RFA*TFRRCSGSHQVDGVIRSVSWKEGK*KISWILK*SMLWQTYNANSDRTDRS*GSRHTTNELSSQW*WVYFK Subject 17575 AA*NNSY*QYRLRLRLRPSGVFGGHS*RFA*TFRRCSGSHQVDGVIRSVSWKEGK*KISWILK*SMLWQTYNANSDRTDRS*GSRHTTNELSSQW*WVYFK 17877
Range 11: 17917 to 18240 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
188.9 bits(406) | 0.0 | 103/108(95%) | 0/108(0%) | Minus/Plus |
Query 87 RSAVEMLCCSAVVKSLNGXXXXXXXXXXXXXXLIVCFCRRR*GT*KNPSE*RYTIASCEVTFVTGGMYL*A*R*SLCLLVTICML*LAYVEKEKV*QPVMGKNPSINL 410 RSAVEMLCC AVVKS NGLQLTLL CACLLAVLIV FCRRR*GT*KN SE*RYTIASCEVTFVTGGMYL*A*R*SLCLLVTICML*LAYVEKEKV*QPVMGKNPSINL Subject 17917 RSAVEMLCCQAVVKSSNGLQLTLLICACLLAVLIVSFCRRR*GT*KNQSE*RYTIASCEVTFVTGGMYL*A*R*SLCLLVTICML*LAYVEKEKV*QPVMGKNPSINL 18240
Grapevine leafroll associated virus 3 isolate TC BR, complete genome
Sequence ID: KX756668.1 Length: 18498 Number of Matches: 11
Range 1: 17577 to 18326 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
566.0 bits(1229) | 0.0 | 242/250(97%) | 0/250(0%) | Plus/Minus |
Query 1 PRNITYSTKTKNEQKD*PNYFIFLTFLYFKFIEGFLPITGC*TFSFSTYAN*SIQIVTNKHSD*RYAYKYIPPVTNVTSHDAIVYRYSDGFF*VPHRLLQKQTISTANKHAQVSNVNCNPFKDLTTAEQHNISTALRNKASRSTS*RSHSLKYTHYH*LDNSFVVCLLPQLRSVRSELALYVCQSIDHLSIQDIFYFPSFHDTLRITPST**LPEHLLNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA 750 PRN TYSTKTKNEQKD*PNYFIFLTFLYFKFIEGFLPITGC*TFSFSTYAN*SIQIVT+KHSD*RYAYKYIPPVTNVTSHDAIVYRYSDGFF*VPHRLLQK TISTANKHAQ+SNVNCNPF+DLTTAEQHNISTALRNKASRSTS*RSHSLKYTHYH*LDNSFVVCLLPQLRSVRSELALYV SIDHLSIQDIFYFPSFHDTLRITPST**LPEHLLNV*ANL*LCPPNTPLG KRRRSLYCQ*ELFYA Subject 17577 PRNKTYSTKTKNEQKD*PNYFIFLTFLYFKFIEGFLPITGC*TFSFSTYAN*SIQIVTSKHSD*RYAYKYIPPVTNVTSHDAIVYRYSDGFF*VPHRLLQKLTISTANKHAQISNVNCNPFEDLTTAEQHNISTALRNKASRSTS*RSHSLKYTHYH*LDNSFVVCLLPQLRSVRSELALYVY*SIDHLSIQDIFYFPSFHDTLRITPST**LPEHLLNV*ANL*LCPPNTPLGRKRRRSLYCQ*ELFYA 18326
Range 2: 17576 to 18076 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
378.6 bits(820) | 0.0 | 162/167(97%) | 0/167(0%) | Minus/Plus |
Query 251 LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKKYLGYLSDQCSGKRIMLTQTGLTAVEEADILRTNYLVSGNGYISNCGIARMLILTLCCGAL*KCCVVQPLSNL*TGYS*RYLLAHVC*RC*LSAFVEGDEALRKTHQSSGT 751 LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKKYLGYLSD+CS K IMLTQTGLTAVEEADILRTNYLVSGNGYISNCGIARMLILTLCCGAL*KCCVVQPLSNL TGYS*RYL AHVC*RC*LSAFVEGDEALRKTHQSSGT Subject 17576 LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKKYLGYLSDRCSSKHIMLTQTGLTAVEEADILRTNYLVSGNGYISNCGIARMLILTLCCGAL*KCCVVQPLSNLQTGYS*RYLFAHVC*RC*LSAFVEGDEALRKTHQSSGT 18076
Range 3: 18110 to 18325 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
161.0 bits(345) | 0.0 | 70/72(97%) | 0/72(0%) | Minus/Plus |
Query 2 VGCIYRRNVNRYVY*LLFVCSNWHM*KKRRFNNQ*WVKILQ*I*NKEK*EK*NN*ASLFVRFSFL*NRLYFE 217 VGCIYRRNVNRYVY*LLFVCSNWHM*K+RRFNNQ*WVKILQ*I*NKEK*EK*NN*ASLFVRFSFL*NR YFE Subject 18110 VGCIYRRNVNRYVY*LLFVCSNWHM*KRRRFNNQ*WVKILQ*I*NKEK*EK*NN*ASLFVRFSFL*NRFYFE 18325
Range 4: 17576 to 18229 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
481.7 bits(1045) | 0.0 | 210/218(96%) | 0/218(0%) | Plus/Minus |
Query 98 KDFYPLLVVKPSLFLHMPIRAYK**LINIAINVTPINTSHPSQTSLRTTQ*CTATLMGFSKCLIAFYKSRQLAPLTNMRK*VTLTVTRLKI*QRLNNTTFLQRSATKRQDQHPSDPTV*NIPITTD*IIRS*YVCFLNCGQSGLS*HYTFARALIT*VSKIFFTSPLSTTHFE*LHRLDDFQNIF*MFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ 751 KDFYPLLVVKPS FLHMPIRAYK**L+NIAINVTPINTSHPSQTSLRTTQ*CTATLMGFSKCLIAFYKS QLAPLTNMRK*VTLTVTRLKI*QRLNNTTFLQRSATKRQDQHPSDPTV*NIPITTD*IIRS*YVCFLNCGQSGLS*HY F RA IT*VSKIFFTSPLSTTHFE*LHRLDDFQNIF*MFKQTSSYAHQTPHLV+SEGGVYTVN+NCSMQ Subject 17576 KDFYPLLVVKPSPFLHMPIRAYK**LVNIAINVTPINTSHPSQTSLRTTQ*CTATLMGFSKCLIAFYKS*QLAPLTNMRK*VTLTVTRLKI*QRLNNTTFLQRSATKRQDQHPSDPTV*NIPITTD*IIRS*YVCFLNCGQSGLS*HYMFTRASIT*VSKIFFTSPLSTTHFE*LHRLDDFQNIF*MFKQTSSYAHQTPHLVVSEGGVYTVNKNCSMQ 18229
Range 5: 18274 to 18324 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
38.2 bits(77) | 0.0 | 16/17(94%) | 0/17(0%) | Plus/Minus |
Query 3 SKYNLFYKNEKRTKRLA 53 SK NLFYKNEKRTKRLA Subject 18274 SK*NLFYKNEKRTKRLA 18324
Range 6: 17577 to 18218 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
485.4 bits(1053) | 0.0 | 206/214(96%) | 0/214(0%) | Minus/Plus |
Query 109 CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIQKMFWKSSSRWSYSKCVVERGEVKNILDT*VINALANV*C*LRPD*PQLRKQTYYERII*SVVMGIFQTVGSLGC*S*RFVAERCRNVVLFSRCQIFKRVTVNVTYLRMFVSGANCLLL*KAMRHLEKPIRVAVHYCVVRSDVCDGWDVFIGVTLIAMFISYYLYALIGICRKREGLTTSNG 750 CIEQF LTV*TPPSL TKWGVWWA*LEVCLNIQKMFWKSSSRWSYSKCVVERGEVKNILDT*VI+AL N+*C*LRPD*PQLRKQTYYERII*SVVMGIFQTVGSLGC*S*RFVAERCRNVVLFSRCQIFKRVTVNVTYLRMFVSGANC LL*KAMRHLEKPIRVAVHYCVVRSDVCDGWDVFIGVTLIAMF SYYLYALIGICRK EGLTTSNG Subject 17577 CIEQFLLTV*TPPSLTTKWGVWWA*LEVCLNIQKMFWKSSSRWSYSKCVVERGEVKNILDT*VIDALVNI*C*LRPD*PQLRKQTYYERII*SVVMGIFQTVGSLGC*S*RFVAERCRNVVLFSRCQIFKRVTVNVTYLRMFVSGANCQLL*KAMRHLEKPIRVAVHYCVVRSDVCDGWDVFIGVTLIAMFTSYYLYALIGICRKGEGLTTSNG 18218
Range 7: 17842 to 18228 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
290.2 bits(627) | 0.0 | 127/129(98%) | 0/129(0%) | Plus/Minus |
Query 99 RIFTHYWLLNLLFFYICQLEHTNSN**T*RLTLRL*IHPTRHKRHFARRNSVPLL*WVFLSASSPSTKADN*HR*QTCASK*R*L*PV*RFDNG*TTQHFYSAPQQSVKINILAIPQFEIYPLPLTR*F 485 RIFTHYWLLNLL FYICQLEHTNSN**T*RLTLRL*IHPTRHKRHFARRNSVPLL*WVFLSASSPSTKADN*HR*QTCA+K*R*L*PV*RFDNG*TTQHFYSAPQQSVKINILAIPQFEIYPLPLTR*F Subject 17842 RIFTHYWLLNLLLFYICQLEHTNSN**T*RLTLRL*IHPTRHKRHFARRNSVPLL*WVFLSASSPSTKADN*HR*QTCANK*R*L*PV*RFDNG*TTQHFYSAPQQSVKINILAIPQFEIYPLPLTR*F 18228
Range 8: 17575 to 17790 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
159.1 bits(341) | 0.0 | 68/72(94%) | 0/72(0%) | Plus/Minus |
Query 537 IIRLPEH*SLKYPRYFLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS 752 II L EH SLKYPRYFLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILS+RIVLCS Subject 17575 IICLLEHRSLKYPRYFLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSIRIVLCS 17790
Range 9: 18278 to 18325 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
35.0 bits(70) | 0.0 | 15/16(94%) | 0/16(0%) | Plus/Minus |
Query 2 LEI*PILQKRKTNKKT 49 LEI PILQKRKTNKKT Subject 18278 LEIKPILQKRKTNKKT 18325
Range 10: 17575 to 17877 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
220.5 bits(475) | 0.0 | 97/101(96%) | 0/101(0%) | Minus/Plus |
Query 450 AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFRRCSGSHQVDGVIRSVSWKEGK*KISWILK*SMLWQTYNANSDRTDRS*GSRHTTNELSSQW*WVYFK 752 AA*NNS+*QYRLRLRL PSGVFGGHS*RFA*TFRRCSGSHQVDGVIRSVSWKEGK*KISWILK*SML TYNANSDRTDRS*GSRHTTNELSSQW*WVYFK Subject 17575 AA*NNSY*QYRLRLRLRPSGVFGGHS*RFA*TFRRCSGSHQVDGVIRSVSWKEGK*KISWILK*SML**TYNANSDRTDRS*GSRHTTNELSSQW*WVYFK 17877
Range 11: 17917 to 18240 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.4 bits(418) | 0.0 | 105/108(97%) | 0/108(0%) | Minus/Plus |
Query 87 RSAVEMLCCSAVVKSLNGXXXXXXXXXXXXXXLIVCFCRRR*GT*KNPSE*RYTIASCEVTFVTGGMYL*A*R*SLCLLVTICML*LAYVEKEKV*QPVMGKNPSINL 410 RSAVEMLCCSAVVKS NGLQLTLL CACLLAVLIV FCRRR*GT*KNPSE*RYTIASCEVTFVTGGMYL*A*R*SLCLLVTICML*LAYVEKEKV*QPVMGKNPSINL Subject 17917 RSAVEMLCCSAVVKSSNGLQLTLLICACLLAVLIVSFCRRR*GT*KNPSE*RYTIASCEVTFVTGGMYL*A*R*SLCLLVTICML*LAYVEKEKV*QPVMGKNPSINL 18240
Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome
Sequence ID: KX701860.1 Length: 18020 Number of Matches: 11
Range 1: 17095 to 17844 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
565.6 bits(1228) | 0.0 | 240/250(96%) | 0/250(0%) | Plus/Minus |
Query 1 PRNITYSTKTKNEQKD*PNYFIFLTFLYFKFIEGFLPITGC*TFSFSTYAN*SIQIVTNKHSD*RYAYKYIPPVTNVTSHDAIVYRYSDGFF*VPHRLLQKQTISTANKHAQVSNVNCNPFKDLTTAEQHNISTALRNKASRSTS*RSHSLKYTHYH*LDNSFVVCLLPQLRSVRSELALYVCQSIDHLSIQDIFYFPSFHDTLRITPST**LPEHLLNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA 750 PRN TYSTKTKNEQKD*PNYFIFLTFLYFKFIEGFLPITGC*TFSFSTYAN*S+QIVTNKHSD*RYAYKYIPPVTNVTSHDAIVYRYSDGFF*VPH LLQK TISTANKHAQ+SNVNCNPF+DLTTAEQ NISTALRNKASRSTS*RSHSL YTHYH*LDNSFVVCLLPQLRSVR ELALYVCQSIDHLSIQDIFYFPSFHDTLRITPST**LPEHLLNV*ANL*LCPPNTPLG KRRRSLYCQ*ELFYA Subject 17095 PRNKTYSTKTKNEQKD*PNYFIFLTFLYFKFIEGFLPITGC*TFSFSTYAN*SVQIVTNKHSD*RYAYKYIPPVTNVTSHDAIVYRYSDGFF*VPHHLLQKLTISTANKHAQISNVNCNPFEDLTTAEQRNISTALRNKASRSTS*RSHSLTYTHYH*LDNSFVVCLLPQLRSVRFELALYVCQSIDHLSIQDIFYFPSFHDTLRITPST**LPEHLLNV*ANL*LCPPNTPLGRKRRRSLYCQ*ELFYA 17844
Range 2: 17094 to 17594 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
380.9 bits(825) | 0.0 | 163/167(98%) | 0/167(0%) | Minus/Plus |
Query 251 LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKKYLGYLSDQCSGKRIMLTQTGLTAVEEADILRTNYLVSGNGYISNCGIARMLILTLCCGAL*KCCVVQPLSNL*TGYS*RYLLAHVC*RC*LSAFVEGDEALRKTHQSSGT 751 LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKKYLGYLSDQCS KRIMLTQTGLTAVEEADILRTNYLVSGNGY+SNCGIARMLILTLCCGAL*KCCVVQPLSNL TGYS*RYL AHVC*RC*LSAFVEGDEALRKTHQSSGT Subject 17094 LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKKYLGYLSDQCSDKRIMLTQTGLTAVEEADILRTNYLVSGNGYMSNCGIARMLILTLCCGAL*KCCVVQPLSNLQTGYS*RYLFAHVC*RC*LSAFVEGDEALRKTHQSSGT 17594
Range 3: 17628 to 17843 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
155.5 bits(333) | 0.0 | 69/72(96%) | 0/72(0%) | Minus/Plus |
Query 2 VGCIYRRNVNRYVY*LLFVCSNWHM*KKRRFNNQ*WVKILQ*I*NKEK*EK*NN*ASLFVRFSFL*NRLYFE 217 VGCIYRRNVNRYVY*LLFV SNWHM*K+RRFNNQ*WVKILQ*I*NKEK*EK*NN*ASLFVRFSFL*NR YFE Subject 17628 VGCIYRRNVNRYVY*LLFVRSNWHM*KRRRFNNQ*WVKILQ*I*NKEK*EK*NN*ASLFVRFSFL*NRFYFE 17843
Range 4: 17094 to 17747 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
481.3 bits(1044) | 0.0 | 210/218(96%) | 0/218(0%) | Plus/Minus |
Query 98 KDFYPLLVVKPSLFLHMPIRAYK**LINIAINVTPINTSHPSQTSLRTTQ*CTATLMGFSKCLIAFYKSRQLAPLTNMRK*VTLTVTRLKI*QRLNNTTFLQRSATKRQDQHPSDPTV*NIPITTD*IIRS*YVCFLNCGQSGLS*HYTFARALIT*VSKIFFTSPLSTTHFE*LHRLDDFQNIF*MFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ 751 KDFYPLLVVKPS FLHMPIRAYK**LINIAINVTPINTSHPSQTSLRTTQ*CTATLMGFSKCLI FYKS QLAPLTNMRK*VTLTVTRLKI*QRLNN TFLQRSATKRQDQHPSDPTV*+IPITTD*IIRS*YVCFLNCGQSGLS*HYTF RALIT*VSKIFFTSPLSTTHFE*LHRLDDFQNIF*MFKQTSSYAHQTPHLV+SEGGVYTVN+NCSMQ Subject 17094 KDFYPLLVVKPSPFLHMPIRAYK**LINIAINVTPINTSHPSQTSLRTTQ*CTATLMGFSKCLITFYKS*QLAPLTNMRK*VTLTVTRLKI*QRLNNATFLQRSATKRQDQHPSDPTV*HIPITTD*IIRS*YVCFLNCGQSGLS*HYTFVRALIT*VSKIFFTSPLSTTHFE*LHRLDDFQNIF*MFKQTSSYAHQTPHLVVSEGGVYTVNKNCSMQ 17747
Range 5: 17792 to 17842 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
38.2 bits(77) | 0.0 | 16/17(94%) | 0/17(0%) | Plus/Minus |
Query 3 SKYNLFYKNEKRTKRLA 53 SK NLFYKNEKRTKRLA Subject 17792 SK*NLFYKNEKRTKRLA 17842
Range 6: 17095 to 17736 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
481.7 bits(1045) | 0.0 | 205/214(96%) | 0/214(0%) | Minus/Plus |
Query 109 CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIQKMFWKSSSRWSYSKCVVERGEVKNILDT*VINALANV*C*LRPD*PQLRKQTYYERII*SVVMGIFQTVGSLGC*S*RFVAERCRNVVLFSRCQIFKRVTVNVTYLRMFVSGANCLLL*KAMRHLEKPIRVAVHYCVVRSDVCDGWDVFIGVTLIAMFISYYLYALIGICRKREGLTTSNG 750 CIEQF LTV*TPPSL TKWGVWWA*LEVCLNIQKMFWKSSSRWSYSKCVVERGEVKNILDT*VINAL NV*C*L+PD*PQLRKQTYYERII*SVVMGI QTVGSLGC*S*RFVAERCRNV LFSRCQIFKRVTVNVTYLRMFVSGANC LL*K MRHLEKPIRVAVHYCVVRSDVCDGWDVFIGVTLIAMFISYYLYALIGICRK EGLTTSNG Subject 17095 CIEQFLLTV*TPPSLTTKWGVWWA*LEVCLNIQKMFWKSSSRWSYSKCVVERGEVKNILDT*VINALTNV*C*LKPD*PQLRKQTYYERII*SVVMGICQTVGSLGC*S*RFVAERCRNVALFSRCQIFKRVTVNVTYLRMFVSGANCQLL*KVMRHLEKPIRVAVHYCVVRSDVCDGWDVFIGVTLIAMFISYYLYALIGICRKGEGLTTSNG 17736
Range 7: 17360 to 17746 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
285.2 bits(616) | 0.0 | 125/129(97%) | 0/129(0%) | Plus/Minus |
Query 99 RIFTHYWLLNLLFFYICQLEHTNSN**T*RLTLRL*IHPTRHKRHFARRNSVPLL*WVFLSASSPSTKADN*HR*QTCASK*R*L*PV*RFDNG*TTQHFYSAPQQSVKINILAIPQFEIYPLPLTR*F 485 RIFTHYWLLNLL FYICQLE TNSN**T*RLTLRL*IHPTRHKRHFARRNSVPLL*WVFLSASSPSTKADN*HR*QTCA+K*R*L*PV*RFDNG*TTQHFYSAPQQSVKINILAIPQF+IYPLPLTR*F Subject 17360 RIFTHYWLLNLLLFYICQLERTNSN**T*RLTLRL*IHPTRHKRHFARRNSVPLL*WVFLSASSPSTKADN*HR*QTCANK*R*L*PV*RFDNG*TTQHFYSAPQQSVKINILAIPQFDIYPLPLTR*F 17746
Range 8: 17093 to 17308 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
166.0 bits(356) | 0.0 | 70/72(97%) | 0/72(0%) | Plus/Minus |
Query 537 IIRLPEH*SLKYPRYFLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS 752 IIRL EH*SLKYPRYFLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILS+RIVLCS Subject 17093 IIRLSEH*SLKYPRYFLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSIRIVLCS 17308
Range 9: 17796 to 17843 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
35.0 bits(70) | 0.0 | 15/16(94%) | 0/16(0%) | Plus/Minus |
Query 2 LEI*PILQKRKTNKKT 49 LEI PILQKRKTNKKT Subject 17796 LEIKPILQKRKTNKKT 17843
Range 10: 17093 to 17395 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
219.2 bits(472) | 0.0 | 96/101(95%) | 0/101(0%) | Minus/Plus |
Query 450 AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFRRCSGSHQVDGVIRSVSWKEGK*KISWILK*SMLWQTYNANSDRTDRS*GSRHTTNELSSQW*WVYFK 752 AA*NNS+*QYRLRLRL PSGVFGGHS*RFA*TFRRCSGSHQVDGVIRSVSWKEGK*KISWILK*SML QTYNANS+RTDRS*GSRHTTNELSSQW*WVY K Subject 17093 AA*NNSY*QYRLRLRLRPSGVFGGHS*RFA*TFRRCSGSHQVDGVIRSVSWKEGK*KISWILK*SML*QTYNANSNRTDRS*GSRHTTNELSSQW*WVYVK 17395
Range 11: 17435 to 17758 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
182.1 bits(391) | 0.0 | 102/108(94%) | 0/108(0%) | Minus/Plus |
Query 87 RSAVEMLCCSAVVKSLNGXXXXXXXXXXXXXXLIVCFCRRR*GT*KNPSE*RYTIASCEVTFVTGGMYL*A*R*SLCLLVTICML*LAYVEKEKV*QPVMGKNPSINL 410 RSAVEML CSAVVKS NGLQLTLL CACLLAVLIV FCRR *GT*KNPSE*RYTIASCEVTFVTGGMYL*A*R*SLCLLVTIC L*LAYVEKEKV*QPVMGKNPSINL Subject 17435 RSAVEMLRCSAVVKSSNGLQLTLLICACLLAVLIVSFCRR**GT*KNPSE*RYTIASCEVTFVTGGMYL*A*R*SLCLLVTICTL*LAYVEKEKV*QPVMGKNPSINL 17758
Grapevine leafroll associated virus 3 isolate 3 5 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130284.1 Length: 4711 Number of Matches: 11
Range 1: 3846 to 4595 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
564.7 bits(1226) | 0.0 | 240/250(96%) | 0/250(0%) | Plus/Minus |
Query 1 PRNITYSTKTKNEQKD*PNYFIFLTFLYFKFIEGFLPITGC*TFSFSTYAN*SIQIVTNKHSD*RYAYKYIPPVTNVTSHDAIVYRYSDGFF*VPHRLLQKQTISTANKHAQVSNVNCNPFKDLTTAEQHNISTALRNKASRSTS*RSHSLKYTHYH*LDNSFVVCLLPQLRSVRSELALYVCQSIDHLSIQDIFYFPSFHDTLRITPST**LPEHLLNV*ANL*LCPPNTPLGHKRRRSLYCQ*ELFYA 750 PRN TYSTKTKNEQKD*PNYFIFLTFLYFKFIEGFLPITGC*TFSFSTYAN*S+QIVTNKHSD*RYAYKYIPPVTNVTSHDAIVYRYS GFF*VPHRLLQK T STANK+AQ+SNVNCNP +DLTTAEQHNISTALRNKASRSTS*RSHSLKYTHYH*LDNSFVVCLLPQLRSVRSELALYVCQSIDHLSIQDIFYFPSFHDTLRITPST**LPEHLLNV*ANL*LCPPNTPLG KRRRSLYCQ*ELFYA Subject 3846 PRNKTYSTKTKNEQKD*PNYFIFLTFLYFKFIEGFLPITGC*TFSFSTYAN*SVQIVTNKHSD*RYAYKYIPPVTNVTSHDAIVYRYSYGFF*VPHRLLQKLTTSTANKNAQISNVNCNPIEDLTTAEQHNISTALRNKASRSTS*RSHSLKYTHYH*LDNSFVVCLLPQLRSVRSELALYVCQSIDHLSIQDIFYFPSFHDTLRITPST**LPEHLLNV*ANL*LCPPNTPLGRKRRRSLYCQ*ELFYA 4595
Range 2: 3845 to 4345 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
375.4 bits(813) | 0.0 | 160/167(96%) | 0/167(0%) | Minus/Plus |
Query 251 LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKKYLGYLSDQCSGKRIMLTQTGLTAVEEADILRTNYLVSGNGYISNCGIARMLILTLCCGAL*KCCVVQPLSNL*TGYS*RYLLAHVC*RC*LSAFVEGDEALRKTHQSSGT 751 LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKKYLGYLSDQCSGK IMLTQTGLTAVEEADILRTNYLVSGNGYISNCGIARMLILTLCCG L*KCCVVQPLSNL +GYS*RYL AH C*RC*LSAFVEGDEALRKTH+SSGT Subject 3845 LHRTILIDSIDSAFAYDQVGCLVGIARGLLKHSEDVLEVIKSMELFEVCRGKRGSKKYLGYLSDQCSGKHIMLTQTGLTAVEEADILRTNYLVSGNGYISNCGIARMLILTLCCGVL*KCCVVQPLSNLQSGYS*RYLFAHFC*RC*LSAFVEGDEALRKTHKSSGT 4345
Range 3: 4379 to 4594 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
150.0 bits(321) | 0.0 | 69/72(96%) | 0/72(0%) | Minus/Plus |
Query 2 VGCIYRRNVNRYVY*LLFVCSNWHM*KKRRFNNQ*WVKILQ*I*NKEK*EK*NN*ASLFVRFSFL*NRLYFE 217 VGCIYRRNVNRYVY*LLFV SNWHM*KKRRFNNQ* VKILQ*I*NKEK*EK*NN*ASLFVRFSFL*NR YFE Subject 4379 VGCIYRRNVNRYVY*LLFVRSNWHM*KKRRFNNQ**VKILQ*I*NKEK*EK*NN*ASLFVRFSFL*NRFYFE 4594
Range 4: 3845 to 4498 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
480.4 bits(1042) | 0.0 | 211/218(97%) | 0/218(0%) | Plus/Minus |
Query 98 KDFYPLLVVKPSLFLHMPIRAYK**LINIAINVTPINTSHPSQTSLRTTQ*CTATLMGFSKCLIAFYKSRQLAPLTNMRK*VTLTVTRLKI*QRLNNTTFLQRSATKRQDQHPSDPTV*NIPITTD*IIRS*YVCFLNCGQSGLS*HYTFARALIT*VSKIFFTSPLSTTHFE*LHRLDDFQNIF*MFKQTSSYAHQTPHLVISEGGVYTVNENCSMQ 751 KDFY LLVVKPSLFLHMPIRAYK**LINIAINVTPINTSHPSQTSLRTTQ*CTATLMGFSKCLIAFYKS QLAPLT MRK*VTLTVTRLKI*QRLNNTTFLQ SATKRQDQHPSDPTV*NIPITTD*IIRS*YVCFLNCGQSGLS*HY FARALIT*VSKIFFTSPLSTTHFE*LHRLDDFQNIF*MFKQTSSYAHQTPHLV+SEGGVYTVN+NCSMQ Subject 3845 KDFYLLLVVKPSLFLHMPIRAYK**LINIAINVTPINTSHPSQTSLRTTQ*CTATLMGFSKCLIAFYKS*QLAPLTKMRK*VTLTVTRLKI*QRLNNTTFLQHSATKRQDQHPSDPTV*NIPITTD*IIRS*YVCFLNCGQSGLS*HYMFARALIT*VSKIFFTSPLSTTHFE*LHRLDDFQNIF*MFKQTSSYAHQTPHLVVSEGGVYTVNKNCSMQ 4498
Range 5: 4543 to 4593 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
38.2 bits(77) | 0.0 | 16/17(94%) | 0/17(0%) | Plus/Minus |
Query 3 SKYNLFYKNEKRTKRLA 53 SK NLFYKNEKRTKRLA Subject 4543 SK*NLFYKNEKRTKRLA 4593
Range 6: 3846 to 4484 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
482.2 bits(1046) | 0.0 | 205/213(96%) | 0/213(0%) | Minus/Plus |
Query 112 CIEQFSLTV*TPPSLMTKWGVWWA*LEVCLNIQKMFWKSSSRWSYSKCVVERGEVKNILDT*VINALANV*C*LRPD*PQLRKQTYYERII*SVVMGIFQTVGSLGC*S*RFVAERCRNVVLFSRCQIFKRVTVNVTYLRMFVSGANCLLL*KAMRHLEKPIRVAVHYCVVRSDVCDGWDVFIGVTLIAMFISYYLYALIGICRKREGLTTSN 750 CIEQF LTV*TPPSL TKWGVWWA*LEVCLNIQKMFWKSSSRWSYSKCVVERGEVKNILDT*VINALAN+*C*LRPD*PQLRKQTYYERII*SVVMGIFQTVGSLGC*S*RFVAE CRNVVLFSRCQIF RVTVNVTYLR+FVSGA+C LL*KAMRHLEKPIRVAVHYCVVRSDVCDGWDVFIGVTLIAMFISYYLYALIGICRKREGLTTSN Subject 3846 CIEQFLLTV*TPPSLTTKWGVWWA*LEVCLNIQKMFWKSSSRWSYSKCVVERGEVKNILDT*VINALANI*C*LRPD*PQLRKQTYYERII*SVVMGIFQTVGSLGC*S*RFVAECCRNVVLFSRCQIFNRVTVNVTYLRIFVSGASCQLL*KAMRHLEKPIRVAVHYCVVRSDVCDGWDVFIGVTLIAMFISYYLYALIGICRKREGLTTSN 4484
Range 7: 4111 to 4497 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
276.5 bits(597) | 0.0 | 122/129(95%) | 0/129(0%) | Plus/Minus |
Query 99 RIFTHYWLLNLLFFYICQLEHTNSN**T*RLTLRL*IHPTRHKRHFARRNSVPLL*WVFLSASSPSTKADN*HR*QTCASK*R*L*PV*RFDNG*TTQHFYSAPQQSVKINILAIPQFEIYPLPLTR*F 485 RIFT+YWLLNLLFFYICQLE TNSN**T*RLTLRL*IHPTRHKRHFARRNSVPLL WVFLSASSPSTKADN*HR*Q CA+K*R*L*P *RFDNG*TTQHFYS PQQSVKINILAIPQFEIYPLPLTR*F Subject 4111 RIFTYYWLLNLLFFYICQLERTNSN**T*RLTLRL*IHPTRHKRHFARRNSVPLLLWVFLSASSPSTKADN*HR*QKCANK*R*L*PD*RFDNG*TTQHFYSTPQQSVKINILAIPQFEIYPLPLTR*F 4497
Range 8: 3844 to 4059 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
166.0 bits(356) | 0.0 | 70/72(97%) | 0/72(0%) | Plus/Minus |
Query 537 IIRLPEH*SLKYPRYFLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSMRIVLCS 752 II LPEH*SLKYPRYFLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILS+RIVLCS Subject 3844 IICLPEH*SLKYPRYFLLPLFPRHTSNNSIDLMTSRTSSECLSKPLAMPTKHPTWS*AKAESILSIRIVLCS 4059
Range 9: 4547 to 4594 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
35.0 bits(70) | 0.0 | 15/16(94%) | 0/16(0%) | Plus/Minus |
Query 2 LEI*PILQKRKTNKKT 49 LEI PILQKRKTNKKT Subject 4547 LEIKPILQKRKTNKKT 4594
Range 10: 3844 to 4146 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
231.5 bits(499) | 0.0 | 99/101(98%) | 0/101(0%) | Minus/Plus |
Query 450 AA*NNSH*QYRLRLRL*PSGVFGGHS*RFA*TFRRCSGSHQVDGVIRSVSWKEGK*KISWILK*SMLWQTYNANSDRTDRS*GSRHTTNELSSQW*WVYFK 752 AA*NNS+*QYRLRLRL PSGVFGGHS*RFA*TFRRCSGSHQVDGVIRSVSWKEGK*KISWILK*SMLWQTYNANSDRTDRS*GSRHTTNELSSQW*WVYFK Subject 3844 AA*NNSY*QYRLRLRLRPSGVFGGHS*RFA*TFRRCSGSHQVDGVIRSVSWKEGK*KISWILK*SMLWQTYNANSDRTDRS*GSRHTTNELSSQW*WVYFK 4146
Range 11: 4186 to 4509 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
181.6 bits(390) | 0.0 | 99/108(92%) | 0/108(0%) | Minus/Plus |
Query 87 RSAVEMLCCSAVVKSLNGXXXXXXXXXXXXXXLIVCFCRRR*GT*KNPSE*RYTIASCEVTFVTGGMYL*A*R*SLCLLVTICML*LAYVEKEKV*QPVMGKNPSINL 410 RSAVEMLCCSAVVKS GLQLTLL CA LLAVL+V FCRRR*GT*KNP E*RYTIASCEVTFVTGGMYL*A*R*SLCLLVTIC L*LAYVEKEKV*QPV+GKNPSINL Subject 4186 RSAVEMLCCSAVVKSSIGLQLTLLICAFLLAVLVVSFCRRR*GT*KNP*E*RYTIASCEVTFVTGGMYL*A*R*SLCLLVTICTL*LAYVEKEKV*QPVIGKNPSINL 4509
Nucleotide Sequence (1214 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
953.7 | 5338.0 | 35% | 0 | 97% | KX756668.1 | |
949.6 | 5319.6 | 35% | 0 | 97% | KJ174518.1 | |
947.7 | 5297.2 | 35% | 0 | 97% | KX701860.1 | |
939.5 | 5281.1 | 35% | 0 | 97% | GQ352632.1 | |
938.1 | 5280.7 | 35% | 0 | 97% | EU259806.1 |
Alignments
Grapevine leafroll associated virus 3 isolate TC BR, complete genome
Sequence ID: KX756668.1 Length: 18498 Number of Matches: 8
Range 1: 5478 to 6689 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
953.7 bits(2075) | 0.0 | 403/404(100%) | 0/404(0%) | Plus/Minus |
Query 1 ETFQIRISLLHRHIYVLRTSHISRNGGRAIG*LDKFVH*HRRLTATWGSIIAFVFERLK*FTHHTTSSDFQCTHQINSIMENQYIITYEQIVAQSYYRVDIFALDKNTFLSYEYIR*VPHTQAVLC*MKNEI*A*LVNVEAR**FINLIRHFQNTFSSSDGNVPSHKQRPVCSLNTYSQILQVLHDGIFRGPGFYHFKRHWGVVGFESHHWIISPEPLTLLDVILFTPDRVRRPPLDFPTTSLRQSLAP*LLCDRSGSTLVLRLLVWNTW*PLIRHAAG*LQHPAYAEDTPSRPKRQTDAPFVNRAH*MQVRPLKTARHEKIVTRSHVYDHNLTTLPTLN*EVSLPHEIDCQDGVIRWIALLIIGVEWYASTHLVLLH*AMVKDARVLNCRQDIF*DTGPPP*N 1212 ETFQIRISLLHRHIYVLRTSHISRNGGRAIG*LDKFVH*HRRLTATWGSIIAFVFERLK*FTHHTTSSDFQCTHQINSIMENQYIITYEQIVAQSYYRVDIFALDKNTFLSYEYIR*VPHTQAVLC*MKNEI*A*LVNVEAR**FINLIRHFQNTFSSSDGNVPSHKQRPVCSLNTYSQILQVLHDGIFRGPGFYHFKRHWGVVGFESHHWIISPEPLTLLDVILFTPDRVRRPPLDFPTTSLRQSLAP*LLCDRSGSTLVLRLLVWNTW*PLIRHAAG*LQHPAYAEDTPSRPKRQTDAPFVNRAH*MQVRPLKTARHEKIVTRSHVYDHNLTTLPTLN*EVSLPHEIDCQDGVIRWIALLIIGVEWYASTHLVLLH*AMVKDARVLNCRQDIF*DTGPP *N Subject 5478 ETFQIRISLLHRHIYVLRTSHISRNGGRAIG*LDKFVH*HRRLTATWGSIIAFVFERLK*FTHHTTSSDFQCTHQINSIMENQYIITYEQIVAQSYYRVDIFALDKNTFLSYEYIR*VPHTQAVLC*MKNEI*A*LVNVEAR**FINLIRHFQNTFSSSDGNVPSHKQRPVCSLNTYSQILQVLHDGIFRGPGFYHFKRHWGVVGFESHHWIISPEPLTLLDVILFTPDRVRRPPLDFPTTSLRQSLAP*LLCDRSGSTLVLRLLVWNTW*PLIRHAAG*LQHPAYAEDTPSRPKRQTDAPFVNRAH*MQVRPLKTARHEKIVTRSHVYDHNLTTLPTLN*EVSLPHEIDCQDGVIRWIALLIIGVEWYASTHLVLLH*AMVKDARVLNCRQDIF*DTGPP**N 6689
Range 2: 5487 to 6689 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
918.9 bits(1999) | 0.0 | 400/401(100%) | 0/401(0%) | Minus/Plus |
Query 1 GWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDERSPSXXXXXXXXXXXXXXVAQKSRGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGSDLIFHSTQDGLRVRDLPYVFIAEKGIFIKGKDVDAVVALGDNLFVCDDILVFHDAINLMGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGL 1203 GWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDERSPSVPNQQPQNQGTTGTVAQKSRGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAV TAEGVLKVPNQVYESLPGFHVYKSGSDLIFHSTQDGLRVRDLPYVFIAEKGIFIKGKDVDAVVALGDNLFVCDDILVFHDAINLMGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGL Subject 5487 GWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDERSPSVPNQQPQNQGTTGTVAQKSRGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVATAEGVLKVPNQVYESLPGFHVYKSGSDLIFHSTQDGLRVRDLPYVFIAEKGIFIKGKDVDAVVALGDNLFVCDDILVFHDAINLMGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGL 6689
Range 3: 5477 to 6688 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
914.7 bits(1990) | 0.0 | 401/404(99%) | 0/404(0%) | Plus/Minus |
Query 2 RPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTSIVVLPPPGGAL*HLYSNDLNDSPTIPHRATFSAPIKLIASWKTNISSHTNRLSPKATTASTSLPLIKIPFSAMNTYGKSLTRKPSCVE*KMRSEPDL*TWKPGSDS*T*LGTFKTPSAVVTAMFLAISNALYVLSIPIARYFKYSTTASSEVPVFTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHQIEYVDXXXXXXXXXXDRALPLDFCATVPVVPWFCGCWFGTLGDLSSDTPPANCNILPTPKTRRVALNVKLMRPSSIELTECKCVL*KPQGMRK*SPEATFMTITLPPFLHLIEKLAFPTRLTVRMGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSKTRGHPHKT 1213 RPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTSIVVLPPPGGAL*HLYSNDLNDSPTIPHRATFSAPIKLIASWKTNISSHTNRLSPKATTASTSLPLIKIPFSAMNTYGKSLTRKPSCVE*KMRSEPDL*TWKPGSDS*T*LGTFKTPSAV TAMFLAISNALYVLSIPIARYFKYSTTASSEVPVFTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHQIEYVDLPLTSLPLPSDRALPLDFCATVPVVPWFCGCWFGTLGDLSSDTPPANCNILPTPKTRRVALNVKLMRPSSIELTECKCVL*KPQGMRK*SPEATFMTITLPPFLHLIEKLAFPTRLTVRMGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSKTRGHP +T Subject 5477 RPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTSIVVLPPPGGAL*HLYSNDLNDSPTIPHRATFSAPIKLIASWKTNISSHTNRLSPKATTASTSLPLIKIPFSAMNTYGKSLTRKPSCVE*KMRSEPDL*TWKPGSDS*T*LGTFKTPSAVATAMFLAISNALYVLSIPIARYFKYSTTASSEVPVFTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHQIEYVDLPLTSLPLPSDRALPLDFCATVPVVPWFCGCWFGTLGDLSSDTPPANCNILPTPKTRRVALNVKLMRPSSIELTECKCVL*KPQGMRK*SPEATFMTITLPPFLHLIEKLAFPTRLTVRMGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSKTRGHPDET 6688
Range 4: 5480 to 6652 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
856.5 bits(1863) | 0.0 | 388/391(99%) | 0/391(0%) | Minus/Plus |
Query 38 FMGVAPCLRRYLDGN*VPERL*PLLSAEVQDGWRRTIPRR**GVLSIG*PHPDSQSRGEG*LLN*V*EGW*GYGHKRGFG*LFSHALRFSKDALAFSELY*RRAHQFDV*GDSACLXXXXXXXXXXXXVG*EVTKCSKPAAAKPRYYRNGRTKVKGQGSV*GKW*GSQGEVDVLDLV*TRLRQEV*VAQG**SSDGSQTRLHPNDV*SGKNRDL*RCRRGVLEVSGYRY*ENIQGVAYG*EHCRHYC*RCFESA*SSL*ITTGLPRLQVRLRSHFSFNTRRLACEGLTVCIHS*ERYFYQGQRCRRGSSFGRQSVRM**YIGFP*CY*FDGCTESRSMWYGG*II*VVRIQML*CSPRWR*DDDASGRICQVTQ*HGHHYG*CGKF*GHKY 1210 F+ VAPCLRRYLDGN*VPERL*PLLSAEVQDGWRRTIPRR**GVLSIG*PHPDSQSRGEG*LLN*V*EGW*GYGHKRGFG*LFSHALRFSKDALAFSELY*RRAHQFDV*GDSACLRRRQDVAVSRRRVG*EVTKCSKPAAAKPRYYRNGRTKVKGQGSV*GKW*GSQGEVDVLDLV*TRLRQEV*VAQG**SSDGSQTRLHPNDV*SGKNRDL*RCRRGVLEVSGYRY*ENIQGVAYG*EHCR YC*RCFESA*SSL*ITTGLPRLQVRLRSHFSFNTRRLACEGLTVCIHS*ERYFYQGQRCRRGSSFGRQSVRM**YIGFP*CY*FDGCTESRSMWYGG*II*VVRIQML*CSPRWR*DDDASGRICQVTQ*HGHHYG*CGKF*GHKY Subject 5480 FIRVAPCLRRYLDGN*VPERL*PLLSAEVQDGWRRTIPRR**GVLSIG*PHPDSQSRGEG*LLN*V*EGW*GYGHKRGFG*LFSHALRFSKDALAFSELY*RRAHQFDV*GDSACLRRRQDVAVSRRRVG*EVTKCSKPAAAKPRYYRNGRTKVKGQGSV*GKW*GSQGEVDVLDLV*TRLRQEV*VAQG**SSDGSQTRLHPNDV*SGKNRDL*RCRRGVLEVSGYRY*ENIQGVAYG*EHCRRYC*RCFESA*SSL*ITTGLPRLQVRLRSHFSFNTRRLACEGLTVCIHS*ERYFYQGQRCRRGSSFGRQSVRM**YIGFP*CY*FDGCTESRSMWYGG*II*VVRIQML*CSPRWR*DDDASGRICQVTQ*HGHHYG*CGKF*GHKY 6652
Range 5: 5719 to 6651 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
712.2 bits(1548) | 0.0 | 310/311(100%) | 0/311(0%) | Plus/Minus |
Query 39 YLCPQNFPH*P*WWPCYWVT*QIRPLASSSYRHLGEHYSICIRTT*MIHPPYHIERLSVHPSN**HHGKPIYHHIRTDCRPKLLPRRHLCP**KYLSQL*IHTVSPSHASRLVLNEK*DLSLTCKRGSPVVIHKLD*ALSKHLQQ**RQCS*P*ATPCMFSQYL*PDTSSTPRRHLQRSRFLPLQTSLGCSRV*EPSLDYQP*ATHTS*RNLVHXXXXXXXXP*LPYHFPQTEPCPLTFVRPFR*YLGFAAAGLEHLVTSHPTRRRLTATSCLRRRHAESP*TSN*CALRQ*SSLNASASFENRKA*ENSH 971 YLCPQNFPH*P*WWPCYWVT*QIRPLASSSYRHLGEHYSICIRTT*MIHPPYHIERLSVHPSN**HHGKPIYHHIRTDCRPKLLPRRHLCP**KYLSQL*IHTVSPSHASRLVLNEK*DLSLTCKRGSPVVIHKLD*ALSKHLQQ* RQCS*P*ATPCMFSQYL*PDTSSTPRRHLQRSRFLPLQTSLGCSRV*EPSLDYQP*ATHTS*RNLVHTRSSTSTSP*LPYHFPQTEPCPLTFVRPFR*YLGFAAAGLEHLVTSHPTRRRLTATSCLRRRHAESP*TSN*CALRQ*SSLNASASFENRKA*ENSH Subject 5719 YLCPQNFPH*P*WWPCYWVT*QIRPLASSSYRHLGEHYSICIRTT*MIHPPYHIERLSVHPSN**HHGKPIYHHIRTDCRPKLLPRRHLCP**KYLSQL*IHTVSPSHASRLVLNEK*DLSLTCKRGSPVVIHKLD*ALSKHLQQ*RRQCS*P*ATPCMFSQYL*PDTSSTPRRHLQRSRFLPLQTSLGCSRV*EPSLDYQP*ATHTS*RNLVHTRSSTSTSP*LPYHFPQTEPCPLTFVRPFR*YLGFAAAGLEHLVTSHPTRRRLTATSCLRRRHAESP*TSN*CALRQ*SSLNASASFENRKA*ENSH 6651
Range 6: 5479 to 5682 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
159.1 bits(341) | 0.0 | 66/68(97%) | 0/68(0%) | Plus/Minus |
Query 1008 SYT*LRS*PSPRD*LSGWGYPMDSTPHHRRGMVRLHPSCTSALSNGQRRSGT*LPSRYLLRHGATPIK 1211 SYT*LRS*PSPRD*LSGWGYPMDSTPHHRRGMVRLHPSCTSALSNGQRRSGT*LPSRYLLRHGAT +K Subject 5479 SYT*LRS*PSPRD*LSGWGYPMDSTPHHRRGMVRLHPSCTSALSNGQRRSGT*LPSRYLLRHGATLMK 5682
Range 7: 5866 to 6639 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
568.3 bits(1234) | 0.0 | 258/258(100%) | 0/258(0%) | Minus/Plus |
Query 51 RMRGHQVFQTSSRKTKVLPERSHKSQGARLCLREXXXXXXXXXXXXXXVNKITSRSVSGSGLIIQ*WLSNPTTPQ*RLKW*KPGPLKMPSWST*SIWL*VLREHTGRCLWLGTLPSLLLKVF*KCLIKFMNHYRASTFTSQAQISFFIQHKTACV*GTYRMYS*LRKVFLSRAKMSTR**LWATICSYVMIYWFSMMLLI*WVH*KSLDVVWWVNHLSRSNTNAIMLPQVAVRRRC*WTNLSSHPIARPPLRLMWEVL 824 RMRGHQVFQTSSRKTKVLPERSHKSQGARLCLREVVGKSRGGRRTRSGVNKITSRSVSGSGLIIQ*WLSNPTTPQ*RLKW*KPGPLKMPSWST*SIWL*VLREHTGRCLWLGTLPSLLLKVF*KCLIKFMNHYRASTFTSQAQISFFIQHKTACV*GTYRMYS*LRKVFLSRAKMSTR**LWATICSYVMIYWFSMMLLI*WVH*KSLDVVWWVNHLSRSNTNAIMLPQVAVRRRC*WTNLSSHPIARPPLRLMWEVL Subject 5866 RMRGHQVFQTSSRKTKVLPERSHKSQGARLCLREVVGKSRGGRRTRSGVNKITSRSVSGSGLIIQ*WLSNPTTPQ*RLKW*KPGPLKMPSWST*SIWL*VLREHTGRCLWLGTLPSLLLKVF*KCLIKFMNHYRASTFTSQAQISFFIQHKTACV*GTYRMYS*LRKVFLSRAKMSTR**LWATICSYVMIYWFSMMLLI*WVH*KSLDVVWWVNHLSRSNTNAIMLPQVAVRRRC*WTNLSSHPIARPPLRLMWEVL 6639
Range 8: 5479 to 5823 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
254.5 bits(549) | 0.0 | 113/115(98%) | 0/115(0%) | Minus/Plus |
Query 867 FYGGGPVS*KIS*RQLSTRASLTIA*CRSTRWVEAYHSTPMMRSAIHRITPS*QSISWGRLTSQLSVGRVVRLWS*TWLRVTIFSCLAVFKGRTCIQ*ALLTKGASV*RLGRLGV 1211 F+ GGPVS*KIS*RQLSTRASLTIA*CRSTRWVEAYHSTPMMRSAIHRITPS*QSISWGRLTSQLSVGRVVRLWS*TWLRVTIFSCLAVFKGRTCIQ*ALLTKGASV*RLGRLGV Subject 5479 FHQGGPVS*KIS*RQLSTRASLTIA*CRSTRWVEAYHSTPMMRSAIHRITPS*QSISWGRLTSQLSVGRVVRLWS*TWLRVTIFSCLAVFKGRTCIQ*ALLTKGASV*RLGRLGV 5823
Grapevine leafroll associated virus 3, complete genome
Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 8
Range 1: 5478 to 6689 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
949.6 bits(2066) | 0.0 | 402/404(100%) | 0/404(0%) | Plus/Minus |
Query 1 ETFQIRISLLHRHIYVLRTSHISRNGGRAIG*LDKFVH*HRRLTATWGSIIAFVFERLK*FTHHTTSSDFQCTHQINSIMENQYIITYEQIVAQSYYRVDIFALDKNTFLSYEYIR*VPHTQAVLC*MKNEI*A*LVNVEAR**FINLIRHFQNTFSSSDGNVPSHKQRPVCSLNTYSQILQVLHDGIFRGPGFYHFKRHWGVVGFESHHWIISPEPLTLLDVILFTPDRVRRPPLDFPTTSLRQSLAP*LLCDRSGSTLVLRLLVWNTW*PLIRHAAG*LQHPAYAEDTPSRPKRQTDAPFVNRAH*MQVRPLKTARHEKIVTRSHVYDHNLTTLPTLN*EVSLPHEIDCQDGVIRWIALLIIGVEWYASTHLVLLH*AMVKDARVLNCRQDIF*DTGPPP*N 1212 ETFQIRISLLHRHIYVLRTSHISRNGGRAIG*LDKFVH*HRRLTATWGSIIAFVFERLK*FTHHTTSSDFQCTHQINSIMEN YIITYEQIVAQSYYRVDIFALDKNTFLSYEYIR*VPHTQAVLC*MKNEI*A*LVNVEAR**FINLIRHFQNTFSSSDGNVPSHKQRPVCSLNTYSQILQVLHDGIFRGPGFYHFKRHWGVVGFESHHWIISPEPLTLLDVILFTPDRVRRPPLDFPTTSLRQSLAP*LLCDRSGSTLVLRLLVWNTW*PLIRHAAG*LQHPAYAEDTPSRPKRQTDAPFVNRAH*MQVRPLKTARHEKIVTRSHVYDHNLTTLPTLN*EVSLPHEIDCQDGVIRWIALLIIGVEWYASTHLVLLH*AMVKDARVLNCRQDIF*DTGPP *N Subject 5478 ETFQIRISLLHRHIYVLRTSHISRNGGRAIG*LDKFVH*HRRLTATWGSIIAFVFERLK*FTHHTTSSDFQCTHQINSIMEN*YIITYEQIVAQSYYRVDIFALDKNTFLSYEYIR*VPHTQAVLC*MKNEI*A*LVNVEAR**FINLIRHFQNTFSSSDGNVPSHKQRPVCSLNTYSQILQVLHDGIFRGPGFYHFKRHWGVVGFESHHWIISPEPLTLLDVILFTPDRVRRPPLDFPTTSLRQSLAP*LLCDRSGSTLVLRLLVWNTW*PLIRHAAG*LQHPAYAEDTPSRPKRQTDAPFVNRAH*MQVRPLKTARHEKIVTRSHVYDHNLTTLPTLN*EVSLPHEIDCQDGVIRWIALLIIGVEWYASTHLVLLH*AMVKDARVLNCRQDIF*DTGPP**N 6689
Range 2: 5487 to 6689 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
918.9 bits(1999) | 0.0 | 400/401(100%) | 0/401(0%) | Minus/Plus |
Query 1 GWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDERSPSXXXXXXXXXXXXXXVAQKSRGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGSDLIFHSTQDGLRVRDLPYVFIAEKGIFIKGKDVDAVVALGDNLFVCDDILVFHDAINLMGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGL 1203 GWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDERSPSVPNQQPQNQGTTGTVAQKSRGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAV TAEGVLKVPNQVYESLPGFHVYKSGSDLIFHSTQDGLRVRDLPYVFIAEKGIFIKGKDVDAVVALGDNLFVCDDILVFHDAINLMGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGL Subject 5487 GWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDERSPSVPNQQPQNQGTTGTVAQKSRGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVATAEGVLKVPNQVYESLPGFHVYKSGSDLIFHSTQDGLRVRDLPYVFIAEKGIFIKGKDVDAVVALGDNLFVCDDILVFHDAINLMGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGL 6689
Range 3: 5477 to 6688 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
914.7 bits(1990) | 0.0 | 401/404(99%) | 0/404(0%) | Plus/Minus |
Query 2 RPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTSIVVLPPPGGAL*HLYSNDLNDSPTIPHRATFSAPIKLIASWKTNISSHTNRLSPKATTASTSLPLIKIPFSAMNTYGKSLTRKPSCVE*KMRSEPDL*TWKPGSDS*T*LGTFKTPSAVVTAMFLAISNALYVLSIPIARYFKYSTTASSEVPVFTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHQIEYVDXXXXXXXXXXDRALPLDFCATVPVVPWFCGCWFGTLGDLSSDTPPANCNILPTPKTRRVALNVKLMRPSSIELTECKCVL*KPQGMRK*SPEATFMTITLPPFLHLIEKLAFPTRLTVRMGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSKTRGHPHKT 1213 RPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTSIVVLPPPGGAL*HLYSNDLNDSPTIPHRATFSAPIKLIASWKTNISSHTNRLSPKATTASTSLPLIKIPFSAMNTYGKSLTRKPSCVE*KMRSEPDL*TWKPGSDS*T*LGTFKTPSAV TAMFLAISNALYVLSIPIARYFKYSTTASSEVPVFTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHQIEYVDLPLTSLPLPSDRALPLDFCATVPVVPWFCGCWFGTLGDLSSDTPPANCNILPTPKTRRVALNVKLMRPSSIELTECKCVL*KPQGMRK*SPEATFMTITLPPFLHLIEKLAFPTRLTVRMGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSKTRGHP +T Subject 5477 RPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTSIVVLPPPGGAL*HLYSNDLNDSPTIPHRATFSAPIKLIASWKTNISSHTNRLSPKATTASTSLPLIKIPFSAMNTYGKSLTRKPSCVE*KMRSEPDL*TWKPGSDS*T*LGTFKTPSAVATAMFLAISNALYVLSIPIARYFKYSTTASSEVPVFTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHQIEYVDLPLTSLPLPSDRALPLDFCATVPVVPWFCGCWFGTLGDLSSDTPPANCNILPTPKTRRVALNVKLMRPSSIELTECKCVL*KPQGMRK*SPEATFMTITLPPFLHLIEKLAFPTRLTVRMGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSKTRGHPDET 6688
Range 4: 5480 to 6652 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
853.8 bits(1857) | 0.0 | 387/391(99%) | 0/391(0%) | Minus/Plus |
Query 38 FMGVAPCLRRYLDGN*VPERL*PLLSAEVQDGWRRTIPRR**GVLSIG*PHPDSQSRGEG*LLN*V*EGW*GYGHKRGFG*LFSHALRFSKDALAFSELY*RRAHQFDV*GDSACLXXXXXXXXXXXXVG*EVTKCSKPAAAKPRYYRNGRTKVKGQGSV*GKW*GSQGEVDVLDLV*TRLRQEV*VAQG**SSDGSQTRLHPNDV*SGKNRDL*RCRRGVLEVSGYRY*ENIQGVAYG*EHCRHYC*RCFESA*SSL*ITTGLPRLQVRLRSHFSFNTRRLACEGLTVCIHS*ERYFYQGQRCRRGSSFGRQSVRM**YIGFP*CY*FDGCTESRSMWYGG*II*VVRIQML*CSPRWR*DDDASGRICQVTQ*HGHHYG*CGKF*GHKY 1210 F+ VAPCLRRYLDGN*VPERL*PLLSAEVQDGWRRTIPRR**GVLSIG*PHPDSQSRGEG*LLN*V*EGW*GYGHKRGFG*LFSHALRFSKDALAFSELY*RRAHQFDV*GDSACLRRRQDVAVSRRRVG*EVTKCSKPAAAKPRYYRNGRTKVKGQGSV*GKW*GSQGEVDVLDLV*TRLRQEV*VAQG**SSDGSQTRLHPNDV*SGKNRDL*RCRRGVLEVSGYRY*ENIQGVAYG*EHCR YC*RCFESA*SSL*ITTGLPRLQVRLRSHFSFNTRRLACEGLTVCIHS*ERYFYQGQRCRRGSSFGRQSVRM**YI FP*CY*FDGCTESRSMWYGG*II*VVRIQML*CSPRWR*DDDASGRICQVTQ*HGHHYG*CGKF*GHKY Subject 5480 FIRVAPCLRRYLDGN*VPERL*PLLSAEVQDGWRRTIPRR**GVLSIG*PHPDSQSRGEG*LLN*V*EGW*GYGHKRGFG*LFSHALRFSKDALAFSELY*RRAHQFDV*GDSACLRRRQDVAVSRRRVG*EVTKCSKPAAAKPRYYRNGRTKVKGQGSV*GKW*GSQGEVDVLDLV*TRLRQEV*VAQG**SSDGSQTRLHPNDV*SGKNRDL*RCRRGVLEVSGYRY*ENIQGVAYG*EHCRRYC*RCFESA*SSL*ITTGLPRLQVRLRSHFSFNTRRLACEGLTVCIHS*ERYFYQGQRCRRGSSFGRQSVRM**YISFP*CY*FDGCTESRSMWYGG*II*VVRIQML*CSPRWR*DDDASGRICQVTQ*HGHHYG*CGKF*GHKY 6652
Range 5: 5719 to 6651 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
707.6 bits(1538) | 0.0 | 309/311(99%) | 0/311(0%) | Plus/Minus |
Query 39 YLCPQNFPH*P*WWPCYWVT*QIRPLASSSYRHLGEHYSICIRTT*MIHPPYHIERLSVHPSN**HHGKPIYHHIRTDCRPKLLPRRHLCP**KYLSQL*IHTVSPSHASRLVLNEK*DLSLTCKRGSPVVIHKLD*ALSKHLQQ**RQCS*P*ATPCMFSQYL*PDTSSTPRRHLQRSRFLPLQTSLGCSRV*EPSLDYQP*ATHTS*RNLVHXXXXXXXXP*LPYHFPQTEPCPLTFVRPFR*YLGFAAAGLEHLVTSHPTRRRLTATSCLRRRHAESP*TSN*CALRQ*SSLNASASFENRKA*ENSH 971 YLCPQNFPH*P*WWPCYWVT*QIRPLASSSYRHLGEHYSICIRTT*MIHPPYHIERLSVHPSN**HHGK IYHHIRTDCRPKLLPRRHLCP**KYLSQL*IHTVSPSHASRLVLNEK*DLSLTCKRGSPVVIHKLD*ALSKHLQQ* RQCS*P*ATPCMFSQYL*PDTSSTPRRHLQRSRFLPLQTSLGCSRV*EPSLDYQP*ATHTS*RNLVHTRSSTSTSP*LPYHFPQTEPCPLTFVRPFR*YLGFAAAGLEHLVTSHPTRRRLTATSCLRRRHAESP*TSN*CALRQ*SSLNASASFENRKA*ENSH Subject 5719 YLCPQNFPH*P*WWPCYWVT*QIRPLASSSYRHLGEHYSICIRTT*MIHPPYHIERLSVHPSN**HHGKLIYHHIRTDCRPKLLPRRHLCP**KYLSQL*IHTVSPSHASRLVLNEK*DLSLTCKRGSPVVIHKLD*ALSKHLQQ*RRQCS*P*ATPCMFSQYL*PDTSSTPRRHLQRSRFLPLQTSLGCSRV*EPSLDYQP*ATHTS*RNLVHTRSSTSTSP*LPYHFPQTEPCPLTFVRPFR*YLGFAAAGLEHLVTSHPTRRRLTATSCLRRRHAESP*TSN*CALRQ*SSLNASASFENRKA*ENSH 6651
Range 6: 5479 to 5682 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
159.1 bits(341) | 0.0 | 66/68(97%) | 0/68(0%) | Plus/Minus |
Query 1008 SYT*LRS*PSPRD*LSGWGYPMDSTPHHRRGMVRLHPSCTSALSNGQRRSGT*LPSRYLLRHGATPIK 1211 SYT*LRS*PSPRD*LSGWGYPMDSTPHHRRGMVRLHPSCTSALSNGQRRSGT*LPSRYLLRHGAT +K Subject 5479 SYT*LRS*PSPRD*LSGWGYPMDSTPHHRRGMVRLHPSCTSALSNGQRRSGT*LPSRYLLRHGATLMK 5682
Range 7: 5866 to 6639 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
561.5 bits(1219) | 0.0 | 257/258(100%) | 0/258(0%) | Minus/Plus |
Query 51 RMRGHQVFQTSSRKTKVLPERSHKSQGARLCLREXXXXXXXXXXXXXXVNKITSRSVSGSGLIIQ*WLSNPTTPQ*RLKW*KPGPLKMPSWST*SIWL*VLREHTGRCLWLGTLPSLLLKVF*KCLIKFMNHYRASTFTSQAQISFFIQHKTACV*GTYRMYS*LRKVFLSRAKMSTR**LWATICSYVMIYWFSMMLLI*WVH*KSLDVVWWVNHLSRSNTNAIMLPQVAVRRRC*WTNLSSHPIARPPLRLMWEVL 824 RMRGHQVFQTSSRKTKVLPERSHKSQGARLCLREVVGKSRGGRRTRSGVNKITSRSVSGSGLIIQ*WLSNPTTPQ*RLKW*KPGPLKMPSWST*SIWL*VLREHTGRCLWLGTLPSLLLKVF*KCLIKFMNHYRASTFTSQAQISFFIQHKTACV*GTYRMYS*LRKVFLSRAKMSTR**LWATICSYVMIY FSMMLLI*WVH*KSLDVVWWVNHLSRSNTNAIMLPQVAVRRRC*WTNLSSHPIARPPLRLMWEVL Subject 5866 RMRGHQVFQTSSRKTKVLPERSHKSQGARLCLREVVGKSRGGRRTRSGVNKITSRSVSGSGLIIQ*WLSNPTTPQ*RLKW*KPGPLKMPSWST*SIWL*VLREHTGRCLWLGTLPSLLLKVF*KCLIKFMNHYRASTFTSQAQISFFIQHKTACV*GTYRMYS*LRKVFLSRAKMSTR**LWATICSYVMIY*FSMMLLI*WVH*KSLDVVWWVNHLSRSNTNAIMLPQVAVRRRC*WTNLSSHPIARPPLRLMWEVL 6639
Range 8: 5479 to 5823 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
254.5 bits(549) | 0.0 | 113/115(98%) | 0/115(0%) | Minus/Plus |
Query 867 FYGGGPVS*KIS*RQLSTRASLTIA*CRSTRWVEAYHSTPMMRSAIHRITPS*QSISWGRLTSQLSVGRVVRLWS*TWLRVTIFSCLAVFKGRTCIQ*ALLTKGASV*RLGRLGV 1211 F+ GGPVS*KIS*RQLSTRASLTIA*CRSTRWVEAYHSTPMMRSAIHRITPS*QSISWGRLTSQLSVGRVVRLWS*TWLRVTIFSCLAVFKGRTCIQ*ALLTKGASV*RLGRLGV Subject 5479 FHQGGPVS*KIS*RQLSTRASLTIA*CRSTRWVEAYHSTPMMRSAIHRITPS*QSISWGRLTSQLSVGRVVRLWS*TWLRVTIFSCLAVFKGRTCIQ*ALLTKGASV*RLGRLGV 5823
Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome
Sequence ID: KX701860.1 Length: 18020 Number of Matches: 8
Range 1: 4996 to 6207 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
947.7 bits(2062) | 0.0 | 400/404(99%) | 0/404(0%) | Plus/Minus |
Query 1 ETFQIRISLLHRHIYVLRTSHISRNGGRAIG*LDKFVH*HRRLTATWGSIIAFVFERLK*FTHHTTSSDFQCTHQINSIMENQYIITYEQIVAQSYYRVDIFALDKNTFLSYEYIR*VPHTQAVLC*MKNEI*A*LVNVEAR**FINLIRHFQNTFSSSDGNVPSHKQRPVCSLNTYSQILQVLHDGIFRGPGFYHFKRHWGVVGFESHHWIISPEPLTLLDVILFTPDRVRRPPLDFPTTSLRQSLAP*LLCDRSGSTLVLRLLVWNTW*PLIRHAAG*LQHPAYAEDTPSRPKRQTDAPFVNRAH*MQVRPLKTARHEKIVTRSHVYDHNLTTLPTLN*EVSLPHEIDCQDGVIRWIALLIIGVEWYASTHLVLLH*AMVKDARVLNCRQDIF*DTGPPP*N 1212 ETFQIRISLLHRHIYVLRTSHISRNGGRAIG*LDKFVH*HRRLTATWGSIIAFVFERLK*FTHHTTSSDFQCTHQINSIMENQYIITYEQIVAQSYYRVDIFALDKNTFLSYEYIR*VPHTQAVLC*MKNEI*A*LVNVEAR**FINLIRHFQNTFSSSDGNVPSHKQRPVCSLNTYSQILQVLHDGIFRGPGFY+FKRHWGVVGFESHHWIISPEPLTLLDVILFTPDRVRRPPLDFPTTSLRQSLAP*LLCDRSGSTLVLRLLVWNTW*PLIRHAAG*LQ+PAYAEDTPSRPKRQTDAPFVNRAH*MQVRPLKTARHEKIVTRSH+YDHNLTTLPTLN*EVSLPHEIDCQDGVIRWIALLIIGVEWYASTHLVLLH*AMVKDARVLNCRQDIF*DTGPP *N Subject 4996 ETFQIRISLLHRHIYVLRTSHISRNGGRAIG*LDKFVH*HRRLTATWGSIIAFVFERLK*FTHHTTSSDFQCTHQINSIMENQYIITYEQIVAQSYYRVDIFALDKNTFLSYEYIR*VPHTQAVLC*MKNEI*A*LVNVEAR**FINLIRHFQNTFSSSDGNVPSHKQRPVCSLNTYSQILQVLHDGIFRGPGFYYFKRHWGVVGFESHHWIISPEPLTLLDVILFTPDRVRRPPLDFPTTSLRQSLAP*LLCDRSGSTLVLRLLVWNTW*PLIRHAAG*LQYPAYAEDTPSRPKRQTDAPFVNRAH*MQVRPLKTARHEKIVTRSHIYDHNLTTLPTLN*EVSLPHEIDCQDGVIRWIALLIIGVEWYASTHLVLLH*AMVKDARVLNCRQDIF*DTGPP**N 6207
Range 2: 5005 to 6207 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
915.2 bits(1991) | 0.0 | 398/401(99%) | 0/401(0%) | Minus/Plus |
Query 1 GWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDERSPSXXXXXXXXXXXXXXVAQKSRGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGSDLIFHSTQDGLRVRDLPYVFIAEKGIFIKGKDVDAVVALGDNLFVCDDILVFHDAINLMGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGL 1203 GWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGR+LQLAGGVSDERSPSVPNQQPQNQGTTGTVAQKSRGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAV TAEGVLKVPNQVYESLPGFHVYKSGSDLIFHSTQDGLRVRDLPYVFIAEKGIFIKGKDVD VVALGDNLFVCDDILVFHDAINLMGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGL Subject 5005 GWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRILQLAGGVSDERSPSVPNQQPQNQGTTGTVAQKSRGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVATAEGVLKVPNQVYESLPGFHVYKSGSDLIFHSTQDGLRVRDLPYVFIAEKGIFIKGKDVDTVVALGDNLFVCDDILVFHDAINLMGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGL 6207
Range 3: 4995 to 6206 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
912.9 bits(1986) | 0.0 | 400/404(99%) | 0/404(0%) | Plus/Minus |
Query 2 RPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTSIVVLPPPGGAL*HLYSNDLNDSPTIPHRATFSAPIKLIASWKTNISSHTNRLSPKATTASTSLPLIKIPFSAMNTYGKSLTRKPSCVE*KMRSEPDL*TWKPGSDS*T*LGTFKTPSAVVTAMFLAISNALYVLSIPIARYFKYSTTASSEVPVFTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHQIEYVDXXXXXXXXXXDRALPLDFCATVPVVPWFCGCWFGTLGDLSSDTPPANCNILPTPKTRRVALNVKLMRPSSIELTECKCVL*KPQGMRK*SPEATFMTITLPPFLHLIEKLAFPTRLTVRMGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSKTRGHPHKT 1213 RPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTSIVVLPPPGGAL*HLYSNDLNDSPTIPHRATFSAPIKLIASWKTNISSHTNRLSPKATT STSLPLIKIPFSAMNTYGKSLTRKPSCVE*KMRSEPDL*TWKPGSDS*T*LGTFKTPSAV TAMFLAISNALYVLSIPIARYFKYSTTASSEVPVFTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHQIEYVDLPLTSLPLPSDRALPLDFCATVPVVPWFCGCWFGTLGDLSSDTPPANCNILPTPKTRRVALNVKLMRPSSIELTECKCVL*KPQGMRK*SPEATFMTITLPPFLHLIEKLAFPTRLTVRMGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSKTRGHP +T Subject 4995 RPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTSIVVLPPPGGAL*HLYSNDLNDSPTIPHRATFSAPIKLIASWKTNISSHTNRLSPKATTVSTSLPLIKIPFSAMNTYGKSLTRKPSCVE*KMRSEPDL*TWKPGSDS*T*LGTFKTPSAVATAMFLAISNALYVLSIPIARYFKYSTTASSEVPVFTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHQIEYVDLPLTSLPLPSDRALPLDFCATVPVVPWFCGCWFGTLGDLSSDTPPANCNILPTPKTRRVALNVKLMRPSSIELTECKCVL*KPQGMRK*SPEATFMTITLPPFLHLIEKLAFPTRLTVRMGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSKTRGHPDET 6206
Range 4: 4998 to 6170 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
847.8 bits(1844) | 0.0 | 384/391(98%) | 0/391(0%) | Minus/Plus |
Query 38 FMGVAPCLRRYLDGN*VPERL*PLLSAEVQDGWRRTIPRR**GVLSIG*PHPDSQSRGEG*LLN*V*EGW*GYGHKRGFG*LFSHALRFSKDALAFSELY*RRAHQFDV*GDSACLXXXXXXXXXXXXVG*EVTKCSKPAAAKPRYYRNGRTKVKGQGSV*GKW*GSQGEVDVLDLV*TRLRQEV*VAQG**SSDGSQTRLHPNDV*SGKNRDL*RCRRGVLEVSGYRY*ENIQGVAYG*EHCRHYC*RCFESA*SSL*ITTGLPRLQVRLRSHFSFNTRRLACEGLTVCIHS*ERYFYQGQRCRRGSSFGRQSVRM**YIGFP*CY*FDGCTESRSMWYGG*II*VVRIQML*CSPRWR*DDDASGRICQVTQ*HGHHYG*CGKF*GHKY 1210 F+ VAPCLRRYLDGN*VPERL*PLLSAEVQDGWRRTIPRR**GVLSIG*PHPDSQSRGEG*LLN*V*EGW*GYGHK GFG*LFSHALRFSKDALAFSELY*RRAHQFDV*GDSACLRRRQD+AVSRRRVG*EVTKCSKPAAAKPRYYRNGRTKVKGQGSV*GKW*GSQGEVDVLDLV*TRLRQEV*VAQG**SSDGSQTRLHPNDV*S KNRDL*RCRRGVLEVSGYRY*ENIQGVAYG*EHCR YC*RCFESA*SSL*ITTGLPRLQVRLRSHFSFNTRRLACEGLTVCIHS*ERYFYQGQRCR GSSFGRQSVRM**YIGFP*CY*FDGCTESRSMWYGG*II*VVRIQML*CSPRWR*DDDASGRICQVTQ*HGHHYG*CGKF*GHKY Subject 4998 FIRVAPCLRRYLDGN*VPERL*PLLSAEVQDGWRRTIPRR**GVLSIG*PHPDSQSRGEG*LLN*V*EGW*GYGHKCGFG*LFSHALRFSKDALAFSELY*RRAHQFDV*GDSACLRRRQDIAVSRRRVG*EVTKCSKPAAAKPRYYRNGRTKVKGQGSV*GKW*GSQGEVDVLDLV*TRLRQEV*VAQG**SSDGSQTRLHPNDV*SSKNRDL*RCRRGVLEVSGYRY*ENIQGVAYG*EHCRRYC*RCFESA*SSL*ITTGLPRLQVRLRSHFSFNTRRLACEGLTVCIHS*ERYFYQGQRCRHGSSFGRQSVRM**YIGFP*CY*FDGCTESRSMWYGG*II*VVRIQML*CSPRWR*DDDASGRICQVTQ*HGHHYG*CGKF*GHKY 6170
Range 5: 5237 to 6169 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
701.2 bits(1524) | 0.0 | 307/311(99%) | 0/311(0%) | Plus/Minus |
Query 39 YLCPQNFPH*P*WWPCYWVT*QIRPLASSSYRHLGEHYSICIRTT*MIHPPYHIERLSVHPSN**HHGKPIYHHIRTDCRPKLLPRRHLCP**KYLSQL*IHTVSPSHASRLVLNEK*DLSLTCKRGSPVVIHKLD*ALSKHLQQ**RQCS*P*ATPCMFSQYL*PDTSSTPRRHLQRSRFLPLQTSLGCSRV*EPSLDYQP*ATHTS*RNLVHXXXXXXXXP*LPYHFPQTEPCPLTFVRPFR*YLGFAAAGLEHLVTSHPTRRRLTATSCLRRRHAESP*TSN*CALRQ*SSLNASASFENRKA*ENSH 971 YLCPQNFPH*P*WWPCYWVT*QIRPLASSSYRHLGEHYSICIRTT*MIHPPYHIERLSVHPSN**HHGKPIYHHIRTDCRPKLLP RHLCP**KYLSQL*IHTVSPSHASRLVLNEK*DLSLTCKRGSPVVIHKLD*ALSKHLQQ* RQCS*P*ATPCMFSQYL*PDTSSTPRRHLQRSRFL LQTSLGCSRV*EPSLDYQP*ATHTS*RNLVHTRSSTSTSP*LPYHFPQTEPCPLTFVRPFR*YLGFAAAGLEHLVTSHPTRRRLTA SCLRRRHAESP*TSN*CALRQ*SSLNASASFENRKA*ENSH Subject 5237 YLCPQNFPH*P*WWPCYWVT*QIRPLASSSYRHLGEHYSICIRTT*MIHPPYHIERLSVHPSN**HHGKPIYHHIRTDCRPKLLPCRHLCP**KYLSQL*IHTVSPSHASRLVLNEK*DLSLTCKRGSPVVIHKLD*ALSKHLQQ*RRQCS*P*ATPCMFSQYL*PDTSSTPRRHLQRSRFLLLQTSLGCSRV*EPSLDYQP*ATHTS*RNLVHTRSSTSTSP*LPYHFPQTEPCPLTFVRPFR*YLGFAAAGLEHLVTSHPTRRRLTAISCLRRRHAESP*TSN*CALRQ*SSLNASASFENRKA*ENSH 6169
Range 6: 4997 to 5200 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
159.1 bits(341) | 0.0 | 66/68(97%) | 0/68(0%) | Plus/Minus |
Query 1008 SYT*LRS*PSPRD*LSGWGYPMDSTPHHRRGMVRLHPSCTSALSNGQRRSGT*LPSRYLLRHGATPIK 1211 SYT*LRS*PSPRD*LSGWGYPMDSTPHHRRGMVRLHPSCTSALSNGQRRSGT*LPSRYLLRHGAT +K Subject 4997 SYT*LRS*PSPRD*LSGWGYPMDSTPHHRRGMVRLHPSCTSALSNGQRRSGT*LPSRYLLRHGATLMK 5200
Range 7: 5384 to 6157 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
561.5 bits(1219) | 0.0 | 257/258(100%) | 0/258(0%) | Minus/Plus |
Query 51 RMRGHQVFQTSSRKTKVLPERSHKSQGARLCLREXXXXXXXXXXXXXXVNKITSRSVSGSGLIIQ*WLSNPTTPQ*RLKW*KPGPLKMPSWST*SIWL*VLREHTGRCLWLGTLPSLLLKVF*KCLIKFMNHYRASTFTSQAQISFFIQHKTACV*GTYRMYS*LRKVFLSRAKMSTR**LWATICSYVMIYWFSMMLLI*WVH*KSLDVVWWVNHLSRSNTNAIMLPQVAVRRRC*WTNLSSHPIARPPLRLMWEVL 824 RMRGHQVFQTSSRKTKVLPERSHKSQGARLCLREVVGKSRGGRRTRSGVNKITSRSVSGSGLIIQ*WLSNPTTPQ*RLK *KPGPLKMPSWST*SIWL*VLREHTGRCLWLGTLPSLLLKVF*KCLIKFMNHYRASTFTSQAQISFFIQHKTACV*GTYRMYS*LRKVFLSRAKMSTR**LWATICSYVMIYWFSMMLLI*WVH*KSLDVVWWVNHLSRSNTNAIMLPQVAVRRRC*WTNLSSHPIARPPLRLMWEVL Subject 5384 RMRGHQVFQTSSRKTKVLPERSHKSQGARLCLREVVGKSRGGRRTRSGVNKITSRSVSGSGLIIQ*WLSNPTTPQ*RLK**KPGPLKMPSWST*SIWL*VLREHTGRCLWLGTLPSLLLKVF*KCLIKFMNHYRASTFTSQAQISFFIQHKTACV*GTYRMYS*LRKVFLSRAKMSTR**LWATICSYVMIYWFSMMLLI*WVH*KSLDVVWWVNHLSRSNTNAIMLPQVAVRRRC*WTNLSSHPIARPPLRLMWEVL 6157
Range 8: 4997 to 5341 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
251.7 bits(543) | 0.0 | 112/115(97%) | 0/115(0%) | Minus/Plus |
Query 867 FYGGGPVS*KIS*RQLSTRASLTIA*CRSTRWVEAYHSTPMMRSAIHRITPS*QSISWGRLTSQLSVGRVVRLWS*TWLRVTIFSCLAVFKGRTCIQ*ALLTKGASV*RLGRLGV 1211 F+ GGPVS*KIS*RQLSTRASLTIA*CRSTRWVEAYHSTPMMRSAIHRITPS*QSISWGRLTSQLSVGRVVRLWS* WLRVTIFSCLAVFKGRTCIQ*ALLTKGASV*RLGRLGV Subject 4997 FHQGGPVS*KIS*RQLSTRASLTIA*CRSTRWVEAYHSTPMMRSAIHRITPS*QSISWGRLTSQLSVGRVVRLWS*MWLRVTIFSCLAVFKGRTCIQ*ALLTKGASV*RLGRLGV 5341
Grapevine leafroll associated virus 3 isolate 623, complete genome
Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 8
Range 1: 5478 to 6689 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
939.5 bits(2044) | 0.0 | 399/404(99%) | 0/404(0%) | Plus/Minus |
Query 1 ETFQIRISLLHRHIYVLRTSHISRNGGRAIG*LDKFVH*HRRLTATWGSIIAFVFERLK*FTHHTTSSDFQCTHQINSIMENQYIITYEQIVAQSYYRVDIFALDKNTFLSYEYIR*VPHTQAVLC*MKNEI*A*LVNVEAR**FINLIRHFQNTFSSSDGNVPSHKQRPVCSLNTYSQILQVLHDGIFRGPGFYHFKRHWGVVGFESHHWIISPEPLTLLDVILFTPDRVRRPPLDFPTTSLRQSLAP*LLCDRSGSTLVLRLLVWNTW*PLIRHAAG*LQHPAYAEDTPSRPKRQTDAPFVNRAH*MQVRPLKTARHEKIVTRSHVYDHNLTTLPTLN*EVSLPHEIDCQDGVIRWIALLIIGVEWYASTHLVLLH*AMVKDARVLNCRQDIF*DTGPPP*N 1212 ETFQIRISLLHRHIYVLRTSHISRNGGRAI *LDKFVH*HRRLTATWGSIIAFVFERLK*FTHHTTSSDFQCTHQINSIMENQYIITYEQIVAQSYYRVDIFALDKNTFLSYEYIR*VPHTQAVLC*MKNEI*A*LVNVEAR**FINLIRHFQNTFSSSDGNVPSHKQRPVCSLNTYSQILQVLH+GIFRGPGFYHFKRHWGVVGFESHH IISPEP TLLDVILFTPDRVRRPPLDFPTTSLRQSLAP*LLCDRSGSTLVLRLLVWNTW*PLIRHAAG*LQHPAYAEDTPSRPKRQTDAPFVNRAH*MQVRPLKTARHEKIVTRSHVYDHNLTTLPTLN*EVSLPHEIDCQDGVIRWIALLIIGVEWYASTHLVLLH*AMVKDARVLNCRQDIF*DTGPP *N Subject 5478 ETFQIRISLLHRHIYVLRTSHISRNGGRAIR*LDKFVH*HRRLTATWGSIIAFVFERLK*FTHHTTSSDFQCTHQINSIMENQYIITYEQIVAQSYYRVDIFALDKNTFLSYEYIR*VPHTQAVLC*MKNEI*A*LVNVEAR**FINLIRHFQNTFSSSDGNVPSHKQRPVCSLNTYSQILQVLHNGIFRGPGFYHFKRHWGVVGFESHHRIISPEPFTLLDVILFTPDRVRRPPLDFPTTSLRQSLAP*LLCDRSGSTLVLRLLVWNTW*PLIRHAAG*LQHPAYAEDTPSRPKRQTDAPFVNRAH*MQVRPLKTARHEKIVTRSHVYDHNLTTLPTLN*EVSLPHEIDCQDGVIRWIALLIIGVEWYASTHLVLLH*AMVKDARVLNCRQDIF*DTGPP**N 6689
Range 2: 5487 to 6689 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
918.9 bits(1999) | 0.0 | 400/401(100%) | 0/401(0%) | Minus/Plus |
Query 1 GWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDERSPSXXXXXXXXXXXXXXVAQKSRGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGSDLIFHSTQDGLRVRDLPYVFIAEKGIFIKGKDVDAVVALGDNLFVCDDILVFHDAINLMGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGL 1203 GWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDERSPSVPNQQPQNQGTTGTVAQKSRGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAV TAEGVLKVPNQVYESLPGFHVYKSGSDLIFHSTQDGLRVRDLPYVFIAEKGIFIKGKDVDAVVALGDNLFVCDDILVFHDAINLMGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGL Subject 5487 GWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDERSPSVPNQQPQNQGTTGTVAQKSRGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVATAEGVLKVPNQVYESLPGFHVYKSGSDLIFHSTQDGLRVRDLPYVFIAEKGIFIKGKDVDAVVALGDNLFVCDDILVFHDAINLMGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGL 6689
Range 3: 5477 to 6688 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
913.4 bits(1987) | 0.0 | 400/404(99%) | 0/404(0%) | Plus/Minus |
Query 2 RPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTSIVVLPPPGGAL*HLYSNDLNDSPTIPHRATFSAPIKLIASWKTNISSHTNRLSPKATTASTSLPLIKIPFSAMNTYGKSLTRKPSCVE*KMRSEPDL*TWKPGSDS*T*LGTFKTPSAVVTAMFLAISNALYVLSIPIARYFKYSTTASSEVPVFTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHQIEYVDXXXXXXXXXXDRALPLDFCATVPVVPWFCGCWFGTLGDLSSDTPPANCNILPTPKTRRVALNVKLMRPSSIELTECKCVL*KPQGMRK*SPEATFMTITLPPFLHLIEKLAFPTRLTVRMGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSKTRGHPHKT 1213 RPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTSIVVLPPPGGAL*HLYSNDLNDSPTIPHRATFSAPIKLIASWKTNISSHTN+LSPKATTASTSLPLIKIPFSAMNTYGKSLTRKPSCVE*KMRSEPDL*TWKPGSDS*T*LGTFKTPSAV TAMFLAISNALYVLSIPIARYFKYSTTASSEVPVFTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHQIEYVDLPLTSLPLPSDRALPLDFCATVPVVPWFCGCWFGTLGDLSSDTPPANCNILPTPKTRRVALNVKLMRPSSIELTECKCVL*KPQGMRK*SPEATFMTITLPPFLHLIEKLAFPTRLTVRMGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSKTRGHP +T Subject 5477 RPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTSIVVLPPPGGAL*HLYSNDLNDSPTIPHRATFSAPIKLIASWKTNISSHTNKLSPKATTASTSLPLIKIPFSAMNTYGKSLTRKPSCVE*KMRSEPDL*TWKPGSDS*T*LGTFKTPSAVATAMFLAISNALYVLSIPIARYFKYSTTASSEVPVFTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHQIEYVDLPLTSLPLPSDRALPLDFCATVPVVPWFCGCWFGTLGDLSSDTPPANCNILPTPKTRRVALNVKLMRPSSIELTECKCVL*KPQGMRK*SPEATFMTITLPPFLHLIEKLAFPTRLTVRMGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSKTRGHPDET 6688
Range 4: 5480 to 6652 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
842.8 bits(1833) | 0.0 | 383/391(98%) | 0/391(0%) | Minus/Plus |
Query 38 FMGVAPCLRRYLDGN*VPERL*PLLSAEVQDGWRRTIPRR**GVLSIG*PHPDSQSRGEG*LLN*V*EGW*GYGHKRGFG*LFSHALRFSKDALAFSELY*RRAHQFDV*GDSACLXXXXXXXXXXXXVG*EVTKCSKPAAAKPRYYRNGRTKVKGQGSV*GKW*GSQGEVDVLDLV*TRLRQEV*VAQG**SSDGSQTRLHPNDV*SGKNRDL*RCRRGVLEVSGYRY*ENIQGVAYG*EHCRHYC*RCFESA*SSL*ITTGLPRLQVRLRSHFSFNTRRLACEGLTVCIHS*ERYFYQGQRCRRGSSFGRQSVRM**YIGFP*CY*FDGCTESRSMWYGG*II*VVRIQML*CSPRWR*DDDASGRICQVTQ*HGHHYG*CGKF*GHKY 1210 F+ VAPCLRRYLDGN*VPERL*PLLSAEVQDGWRRTIPRR**GVLSIG*PHPDSQSRGEG*LLN*V*EGW*GYGHKRGFG*LFSHALRFSKDALAFSELY*RRAHQFDV*GDSACLRRRQDVAVSRRRVG*EVTKCSKPAAAKPRYYRNGRTKVKGQGSV*GKW*GSQGEVDVLDLV*TRLRQEV*+AQG**S DGSQTRLHPNDV*SGKNRDL*RCR GVLEVSGYRY*ENIQGVAYG*EHCR YC*RCFESA*SSL*ITTGLPRLQVRLRSHFSFNTRRLACEGLTVCIHS*ERYFYQGQRCRRGSSFGRQ VRM**YIGFP*CY*FDGCTESRSMWYGG*II*VVRIQML*CSPRWR*DDDASGRICQVT *HGHHYG*CGKF*GHKY Subject 5480 FIRVAPCLRRYLDGN*VPERL*PLLSAEVQDGWRRTIPRR**GVLSIG*PHPDSQSRGEG*LLN*V*EGW*GYGHKRGFG*LFSHALRFSKDALAFSELY*RRAHQFDV*GDSACLRRRQDVAVSRRRVG*EVTKCSKPAAAKPRYYRNGRTKVKGQGSV*GKW*GSQGEVDVLDLV*TRLRQEV*MAQG**SGDGSQTRLHPNDV*SGKNRDL*RCRCGVLEVSGYRY*ENIQGVAYG*EHCRRYC*RCFESA*SSL*ITTGLPRLQVRLRSHFSFNTRRLACEGLTVCIHS*ERYFYQGQRCRRGSSFGRQFVRM**YIGFP*CY*FDGCTESRSMWYGG*II*VVRIQML*CSPRWR*DDDASGRICQVT**HGHHYG*CGKF*GHKY 6652
Range 5: 5719 to 6651 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
695.3 bits(1511) | 0.0 | 305/311(98%) | 0/311(0%) | Plus/Minus |
Query 39 YLCPQNFPH*P*WWPCYWVT*QIRPLASSSYRHLGEHYSICIRTT*MIHPPYHIERLSVHPSN**HHGKPIYHHIRTDCRPKLLPRRHLCP**KYLSQL*IHTVSPSHASRLVLNEK*DLSLTCKRGSPVVIHKLD*ALSKHLQQ**RQCS*P*ATPCMFSQYL*PDTSSTPRRHLQRSRFLPLQTSLGCSRV*EPSLDYQP*ATHTS*RNLVHXXXXXXXXP*LPYHFPQTEPCPLTFVRPFR*YLGFAAAGLEHLVTSHPTRRRLTATSCLRRRHAESP*TSN*CALRQ*SSLNASASFENRKA*ENSH 971 YLCPQNFPH*P*WWPCY VT*QIRPLASSSYRHLGEHYSICIRTT*MIHPPYHIERLSVHPSN**HHGKPIYHHIRT+CRPKLLPRRHLCP**KYLSQL*IHTVSPSHASRLVLNEK*DLSLTCKRGSPVVIHKLD*ALSKHLQQ* RQCS*P*ATPCMFSQYL*PDTSSTP+RHLQRSRFLPLQTSLGCSRV*EPS DYQP*A HTS*RNLVHTRSSTSTSP*LPYHFPQTEPCPLTFVRPFR*YLGFAAAGLEHLVTSHPTRRRLTATSCLRRRHAESP*TSN*CALRQ*SSLNASASFENRKA*ENSH Subject 5719 YLCPQNFPH*P*WWPCY*VT*QIRPLASSSYRHLGEHYSICIRTT*MIHPPYHIERLSVHPSN**HHGKPIYHHIRTNCRPKLLPRRHLCP**KYLSQL*IHTVSPSHASRLVLNEK*DLSLTCKRGSPVVIHKLD*ALSKHLQQ*RRQCS*P*ATPCMFSQYL*PDTSSTPQRHLQRSRFLPLQTSLGCSRV*EPSPDYQP*AIHTS*RNLVHTRSSTSTSP*LPYHFPQTEPCPLTFVRPFR*YLGFAAAGLEHLVTSHPTRRRLTATSCLRRRHAESP*TSN*CALRQ*SSLNASASFENRKA*ENSH 6651
Range 6: 5479 to 5682 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
159.1 bits(341) | 0.0 | 66/68(97%) | 0/68(0%) | Plus/Minus |
Query 1008 SYT*LRS*PSPRD*LSGWGYPMDSTPHHRRGMVRLHPSCTSALSNGQRRSGT*LPSRYLLRHGATPIK 1211 SYT*LRS*PSPRD*LSGWGYPMDSTPHHRRGMVRLHPSCTSALSNGQRRSGT*LPSRYLLRHGAT +K Subject 5479 SYT*LRS*PSPRD*LSGWGYPMDSTPHHRRGMVRLHPSCTSALSNGQRRSGT*LPSRYLLRHGATLMK 5682
Range 7: 5866 to 6639 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
557.8 bits(1211) | 0.0 | 254/258(98%) | 0/258(0%) | Minus/Plus |
Query 51 RMRGHQVFQTSSRKTKVLPERSHKSQGARLCLREXXXXXXXXXXXXXXVNKITSRSVSGSGLIIQ*WLSNPTTPQ*RLKW*KPGPLKMPSWST*SIWL*VLREHTGRCLWLGTLPSLLLKVF*KCLIKFMNHYRASTFTSQAQISFFIQHKTACV*GTYRMYS*LRKVFLSRAKMSTR**LWATICSYVMIYWFSMMLLI*WVH*KSLDVVWWVNHLSRSNTNAIMLPQVAVRRRC*WTNLSSHPIARPPLRLMWEVL 824 RMRGHQVFQTSSRKTKVLPERSHKSQGARLCLREVVGKSRGGRRTRSGVNKITSRSV+GSGLII+*WLSNPTTPQ*RLKW*KPGPLKMP WST*SIWL*VLREHTGRCLWLGTLPSLLLKVF*KCLIKFMNHYRASTFTSQAQISFFIQHKTACV*GTYRMYS*LRKVFLSRAKMSTR**LWATICSYVMIYWFSMMLLI*WVH*KSLDVVWWVNHLSRSNTNAIMLPQVAVRRRC*WTNLSSH IARPPLRLMWEVL Subject 5866 RMRGHQVFQTSSRKTKVLPERSHKSQGARLCLREVVGKSRGGRRTRSGVNKITSRSVNGSGLIIR*WLSNPTTPQ*RLKW*KPGPLKMPLWST*SIWL*VLREHTGRCLWLGTLPSLLLKVF*KCLIKFMNHYRASTFTSQAQISFFIQHKTACV*GTYRMYS*LRKVFLSRAKMSTR**LWATICSYVMIYWFSMMLLI*WVH*KSLDVVWWVNHLSRSNTNAIMLPQVAVRRRC*WTNLSSHLIARPPLRLMWEVL 6639
Range 8: 5479 to 5823 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
254.5 bits(549) | 0.0 | 113/115(98%) | 0/115(0%) | Minus/Plus |
Query 867 FYGGGPVS*KIS*RQLSTRASLTIA*CRSTRWVEAYHSTPMMRSAIHRITPS*QSISWGRLTSQLSVGRVVRLWS*TWLRVTIFSCLAVFKGRTCIQ*ALLTKGASV*RLGRLGV 1211 F+ GGPVS*KIS*RQLSTRASLTIA*CRSTRWVEAYHSTPMMRSAIHRITPS*QSISWGRLTSQLSVGRVVRLWS*TWLRVTIFSCLAVFKGRTCIQ*ALLTKGASV*RLGRLGV Subject 5479 FHQGGPVS*KIS*RQLSTRASLTIA*CRSTRWVEAYHSTPMMRSAIHRITPS*QSISWGRLTSQLSVGRVVRLWS*TWLRVTIFSCLAVFKGRTCIQ*ALLTKGASV*RLGRLGV 5823
Grapevine leafroll associated virus 3 isolate GP18, complete genome
Sequence ID: EU259806.1 Length: 18498 Number of Matches: 8
Range 1: 5478 to 6689 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
938.1 bits(2041) | 0.0 | 398/404(99%) | 0/404(0%) | Plus/Minus |
Query 1 ETFQIRISLLHRHIYVLRTSHISRNGGRAIG*LDKFVH*HRRLTATWGSIIAFVFERLK*FTHHTTSSDFQCTHQINSIMENQYIITYEQIVAQSYYRVDIFALDKNTFLSYEYIR*VPHTQAVLC*MKNEI*A*LVNVEAR**FINLIRHFQNTFSSSDGNVPSHKQRPVCSLNTYSQILQVLHDGIFRGPGFYHFKRHWGVVGFESHHWIISPEPLTLLDVILFTPDRVRRPPLDFPTTSLRQSLAP*LLCDRSGSTLVLRLLVWNTW*PLIRHAAG*LQHPAYAEDTPSRPKRQTDAPFVNRAH*MQVRPLKTARHEKIVTRSHVYDHNLTTLPTLN*EVSLPHEIDCQDGVIRWIALLIIGVEWYASTHLVLLH*AMVKDARVLNCRQDIF*DTGPPP*N 1212 ETFQIRISLLHRHIYVLRTSHISRNGGRAIG*LDKFVH*HRRLTATWGSIIAFVFERLK*FTHHTTSSDFQCTHQINSIMENQYIITYEQIVAQS YRVDIFALDKNTFLSYEYIR*VPHTQAVLC*MKNEI*A*LVNVEAR**FINLIRHFQNTFSSSDGNVPSHKQRPVCSLNTYSQILQVLHDGIFRGPGF HFKRHWGVVGFESHHWIISPEPLTLLDVILFTPDRVRRPPLDFPTTSLRQSLAP*LLCDRSGSTLVL+LLVWNTW*PLIR AAG*LQHPAYAEDTPSRPKRQTDAPFVNRAH*MQVRPLKTARHEKIVTRSHVYDHN TTLPTLN*EVSLPHEIDCQDGVIRWIALLIIGVEWYASTHLVLLH*AMVKDARVLNCRQDIF*DTGPP *N Subject 5478 ETFQIRISLLHRHIYVLRTSHISRNGGRAIG*LDKFVH*HRRLTATWGSIIAFVFERLK*FTHHTTSSDFQCTHQINSIMENQYIITYEQIVAQSCYRVDIFALDKNTFLSYEYIR*VPHTQAVLC*MKNEI*A*LVNVEAR**FINLIRHFQNTFSSSDGNVPSHKQRPVCSLNTYSQILQVLHDGIFRGPGFNHFKRHWGVVGFESHHWIISPEPLTLLDVILFTPDRVRRPPLDFPTTSLRQSLAP*LLCDRSGSTLVLQLLVWNTW*PLIRRAAG*LQHPAYAEDTPSRPKRQTDAPFVNRAH*MQVRPLKTARHEKIVTRSHVYDHNFTTLPTLN*EVSLPHEIDCQDGVIRWIALLIIGVEWYASTHLVLLH*AMVKDARVLNCRQDIF*DTGPP**N 6689
Range 2: 5487 to 6689 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
915.2 bits(1991) | 0.0 | 397/401(99%) | 0/401(0%) | Minus/Plus |
Query 1 GWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDERSPSXXXXXXXXXXXXXXVAQKSRGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGSDLIFHSTQDGLRVRDLPYVFIAEKGIFIKGKDVDAVVALGDNLFVCDDILVFHDAINLMGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGL 1203 GWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGG SDERSPSVPNQQ QNQGTTGTVAQKSRGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAV TAEGVLKVPNQVYESLPGFHVYKSGSDLIFHSTQDGLRVRDLPYVFIAEKGIFIKGKDVDAV ALGDNLFVCDDILVFHDAINLMGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGL Subject 5487 GWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVSSIDEGRISLTFRATRRVFGVGRMLQLAGGASDERSPSVPNQQLQNQGTTGTVAQKSRGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVATAEGVLKVPNQVYESLPGFHVYKSGSDLIFHSTQDGLRVRDLPYVFIAEKGIFIKGKDVDAVAALGDNLFVCDDILVFHDAINLMGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGL 6689
Range 3: 5477 to 6688 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
904.7 bits(1968) | 0.0 | 397/404(98%) | 0/404(0%) | Plus/Minus |
Query 2 RPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTSIVVLPPPGGAL*HLYSNDLNDSPTIPHRATFSAPIKLIASWKTNISSHTNRLSPKATTASTSLPLIKIPFSAMNTYGKSLTRKPSCVE*KMRSEPDL*TWKPGSDS*T*LGTFKTPSAVVTAMFLAISNALYVLSIPIARYFKYSTTASSEVPVFTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHQIEYVDXXXXXXXXXXDRALPLDFCATVPVVPWFCGCWFGTLGDLSSDTPPANCNILPTPKTRRVALNVKLMRPSSIELTECKCVL*KPQGMRK*SPEATFMTITLPPFLHLIEKLAFPTRLTVRMGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSKTRGHPHKT 1213 RPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTSIVVLPPPGGAL*HLYSNDLNDSPTIPHRATFSAPIKLIASWKTNISSHTNRLSPKA TASTSLPLIKIPFSAMNTYGKSLTRKPSCVE*KMRSEPDL*TWKPGSDS*T*LGTFKTPSAV TAMFLAISNALYVLSIPIARYFKYSTTASSEVPV TTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHQIEYVDLPLTSLPLPSDRALPLDFCATVPVVPWFC CWFGTLGDLSSD PPANCNILPTPKTRRVALNVKLMRPSSIELTECKCVL*KPQGMRK*SPEATFMTITLPPFLHLIEKLAFPTRLTVRMGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSKTRGHP +T Subject 5477 RPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTSIVVLPPPGGAL*HLYSNDLNDSPTIPHRATFSAPIKLIASWKTNISSHTNRLSPKAATASTSLPLIKIPFSAMNTYGKSLTRKPSCVE*KMRSEPDL*TWKPGSDS*T*LGTFKTPSAVATAMFLAISNALYVLSIPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHQIEYVDLPLTSLPLPSDRALPLDFCATVPVVPWFCSCWFGTLGDLSSDAPPANCNILPTPKTRRVALNVKLMRPSSIELTECKCVL*KPQGMRK*SPEATFMTITLPPFLHLIEKLAFPTRLTVRMGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSKTRGHPDET 6688
Range 4: 5480 to 6652 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
846.5 bits(1841) | 0.0 | 385/391(98%) | 0/391(0%) | Minus/Plus |
Query 38 FMGVAPCLRRYLDGN*VPERL*PLLSAEVQDGWRRTIPRR**GVLSIG*PHPDSQSRGEG*LLN*V*EGW*GYGHKRGFG*LFSHALRFSKDALAFSELY*RRAHQFDV*GDSACLXXXXXXXXXXXXVG*EVTKCSKPAAAKPRYYRNGRTKVKGQGSV*GKW*GSQGEVDVLDLV*TRLRQEV*VAQG**SSDGSQTRLHPNDV*SGKNRDL*RCRRGVLEVSGYRY*ENIQGVAYG*EHCRHYC*RCFESA*SSL*ITTGLPRLQVRLRSHFSFNTRRLACEGLTVCIHS*ERYFYQGQRCRRGSSFGRQSVRM**YIGFP*CY*FDGCTESRSMWYGG*II*VVRIQML*CSPRWR*DDDASGRICQVTQ*HGHHYG*CGKF*GHKY 1210 F+ VAPCLRRYLDGN*VPERL*PLLSAEVQDGWRRTIPRR**GVLSIG*PHPDSQSRGEG*LLN*V*EGW* YGHKRGFG*LFSHALRFSKDALAFSELY*RRAHQFDV*GDSACLRRRQDVAVSRRRVG*EVTKCSKPAAAKPRYYRNGRTKVKGQGSV*GKW*GSQGEVDVLDLV*TRLRQEV*VAQG**SSDGSQTRLHPNDV*SG NRDL*RCRRGVLEVSGYRY*ENIQGVAYG*EHCR YC*RCFESA*SSL*ITTGLPRLQVRLRSHFSFNT RLACEGLTVCIHS*ERYFYQGQRCRRGSSFGRQSVRM**YIGFP*CY*FDGCTESRSMWYGG*II*VVRIQML*CSPRWR*DDDASGRICQVTQ*HGHHYG*CGKF*GHKY Subject 5480 FIRVAPCLRRYLDGN*VPERL*PLLSAEVQDGWRRTIPRR**GVLSIG*PHPDSQSRGEG*LLN*V*EGW*SYGHKRGFG*LFSHALRFSKDALAFSELY*RRAHQFDV*GDSACLRRRQDVAVSRRRVG*EVTKCSKPAAAKPRYYRNGRTKVKGQGSV*GKW*GSQGEVDVLDLV*TRLRQEV*VAQG**SSDGSQTRLHPNDV*SG*NRDL*RCRRGVLEVSGYRY*ENIQGVAYG*EHCRRYC*RCFESA*SSL*ITTGLPRLQVRLRSHFSFNTGRLACEGLTVCIHS*ERYFYQGQRCRRGSSFGRQSVRM**YIGFP*CY*FDGCTESRSMWYGG*II*VVRIQML*CSPRWR*DDDASGRICQVTQ*HGHHYG*CGKF*GHKY 6652
Range 5: 5719 to 6651 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
705.3 bits(1533) | 0.0 | 308/311(99%) | 0/311(0%) | Plus/Minus |
Query 39 YLCPQNFPH*P*WWPCYWVT*QIRPLASSSYRHLGEHYSICIRTT*MIHPPYHIERLSVHPSN**HHGKPIYHHIRTDCRPKLLPRRHLCP**KYLSQL*IHTVSPSHASRLVLNEK*DLSLTCKRGSPVVIHKLD*ALSKHLQQ**RQCS*P*ATPCMFSQYL*PDTSSTPRRHLQRSRFLPLQTSLGCSRV*EPSLDYQP*ATHTS*RNLVHXXXXXXXXP*LPYHFPQTEPCPLTFVRPFR*YLGFAAAGLEHLVTSHPTRRRLTATSCLRRRHAESP*TSN*CALRQ*SSLNASASFENRKA*ENSH 971 YLCPQNFPH*P*WWPCYWVT*QIRPLASSSYRHLGEHYSICIRTT*MIHPPYHIERLSVHPSN**HHGKPIYHHIRTDCRPKLLPRRHLCP**KYLSQL*IHTVSPSHASR VLNEK*DLSLTCKRGSPVVIHKLD*ALSKHLQQ* RQCS*P*ATPCMFSQYL*PDTSSTPRRHLQRSRF PLQTSLGCSRV*EPSLDYQP*ATHTS*RNLVHTRSSTSTSP*LPYHFPQTEPCPLTFVRPFR*YLGFAAAGLEHLVTSHPTRRRLTATSCLRRRHAESP*TSN*CALRQ*SSLNASASFENRKA*ENSH Subject 5719 YLCPQNFPH*P*WWPCYWVT*QIRPLASSSYRHLGEHYSICIRTT*MIHPPYHIERLSVHPSN**HHGKPIYHHIRTDCRPKLLPRRHLCP**KYLSQL*IHTVSPSHASRPVLNEK*DLSLTCKRGSPVVIHKLD*ALSKHLQQ*RRQCS*P*ATPCMFSQYL*PDTSSTPRRHLQRSRF*PLQTSLGCSRV*EPSLDYQP*ATHTS*RNLVHTRSSTSTSP*LPYHFPQTEPCPLTFVRPFR*YLGFAAAGLEHLVTSHPTRRRLTATSCLRRRHAESP*TSN*CALRQ*SSLNASASFENRKA*ENSH 6651
Range 6: 5479 to 5682 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
159.1 bits(341) | 0.0 | 66/68(97%) | 0/68(0%) | Plus/Minus |
Query 1008 SYT*LRS*PSPRD*LSGWGYPMDSTPHHRRGMVRLHPSCTSALSNGQRRSGT*LPSRYLLRHGATPIK 1211 SYT*LRS*PSPRD*LSGWGYPMDSTPHHRRGMVRLHPSCTSALSNGQRRSGT*LPSRYLLRHGAT +K Subject 5479 SYT*LRS*PSPRD*LSGWGYPMDSTPHHRRGMVRLHPSCTSALSNGQRRSGT*LPSRYLLRHGATLMK 5682
Range 7: 5866 to 6639 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
558.7 bits(1213) | 0.0 | 254/258(98%) | 0/258(0%) | Minus/Plus |
Query 51 RMRGHQVFQTSSRKTKVLPERSHKSQGARLCLREXXXXXXXXXXXXXXVNKITSRSVSGSGLIIQ*WLSNPTTPQ*RLKW*KPGPLKMPSWST*SIWL*VLREHTGRCLWLGTLPSLLLKVF*KCLIKFMNHYRASTFTSQAQISFFIQHKTACV*GTYRMYS*LRKVFLSRAKMSTR**LWATICSYVMIYWFSMMLLI*WVH*KSLDVVWWVNHLSRSNTNAIMLPQVAVRRRC*WTNLSSHPIARPPLRLMWEVL 824 RMRGHQVFQTSS KTKVLPERSHKSQGARLCLREVVGKSRGGRRTRSGVNKITSRSVSGSGLIIQ*WLSNPTTPQ*RLKW KPGPLKMPSWST*SIWL*VLREHTGRCLWLGTLPSLLLKVF*KCLIKFMNHYRASTFTSQAQISFFIQH+TACV*GTYRMYS*LRKVFLSRAKMSTR* LWATICSYVMIYWFSMMLLI*WVH*KSLDVVWWVNHLSRSNTNAIMLPQVAVRRRC*WTNLSSHPIARPPLRLMWEVL Subject 5866 RMRGHQVFQTSSCKTKVLPERSHKSQGARLCLREVVGKSRGGRRTRSGVNKITSRSVSGSGLIIQ*WLSNPTTPQ*RLKWLKPGPLKMPSWST*SIWL*VLREHTGRCLWLGTLPSLLLKVF*KCLIKFMNHYRASTFTSQAQISFFIQHRTACV*GTYRMYS*LRKVFLSRAKMSTR*QLWATICSYVMIYWFSMMLLI*WVH*KSLDVVWWVNHLSRSNTNAIMLPQVAVRRRC*WTNLSSHPIARPPLRLMWEVL 6639
Range 8: 5479 to 5823 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
253.1 bits(546) | 0.0 | 112/115(97%) | 0/115(0%) | Minus/Plus |
Query 867 FYGGGPVS*KIS*RQLSTRASLTIA*CRSTRWVEAYHSTPMMRSAIHRITPS*QSISWGRLTSQLSVGRVVRLWS*TWLRVTIFSCLAVFKGRTCIQ*ALLTKGASV*RLGRLGV 1211 F+ GGPVS*KIS*RQLSTRASLTIA*CRSTRWVEAYHSTPMMRSAIHRITPS*QSISWGRLTSQLSVGRVV+LWS*TWLRVTIFSCLAVFKGRTCIQ*ALLTKGASV*RLGRLGV Subject 5479 FHQGGPVS*KIS*RQLSTRASLTIA*CRSTRWVEAYHSTPMMRSAIHRITPS*QSISWGRLTSQLSVGRVVKLWS*TWLRVTIFSCLAVFKGRTCIQ*ALLTKGASV*RLGRLGV 5823
Nucleotide Sequence (1742 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
1175.5 | 6827.6 | 26% | 0 | 83% | HQ130295.1 | |
1175.5 | 6831.3 | 26% | 0 | 83% | HQ130300.1 | |
1175.5 | 6843.6 | 26% | 0 | 83% | HQ130315.1 | |
1175.5 | 6843.6 | 26% | 0 | 83% | HQ130322.1 | |
1173.6 | 6842.2 | 26% | 0 | 83% | KX756669.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 6 6 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130295.1 Length: 4711 Number of Matches: 17
Range 1: 1996 to 3735 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1175.5 bits(2559) | 0.0 | 540/580(93%) | 0/580(0%) | Minus/Plus |
Query 2 *SGYLRRAVFTDYGSSTDKRKATQTRSFESRESNTTRYGEHDSGHDTTFRTLLYCKEYKRQRWV*GGDRIRSKEGLLELFGSKGSYIRREIRRVSNQHCAILYEVFYSHHHYATYREENSASVHCPS*ARRPEEVHSVLLRLRTTG*QILPGGRVEG*RNGLRYSD*IS*FKA*RFGDV*HLRKHLII*RWNSDQF*LQFAVIPA*TLVV*K**LMXXXXXXXXTIVW*SHFETLTLDSPL*KSIRRIQRLY*VLINCFPRFLIRKVR**VTM*DRVSGFTTSFRKCVKISTRSARYNVPVT*KHI*ETGRLTLIYFLMS*PTTKQR*GG*LIKTIARGVGY*TI*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGFDH*HSL*DVDRNSQKFYRRLNTRRRLLCFSVGRSEIN*R*FPLKKKERQVFL*WCLWIRRCES*VYFVRGESRIRVHRFLETSLRR*RRRWKHTTALTNLISRLKHHGPIVYYRADPFRLVQ**RDSPVHLD 1741 *SGYLR AVF D GSSTDKRK TQTRSFE RESNTTRYGE+DSGHDTTFRTLLYCKEYKRQR V*GGDRIRSKE LL+LFGSKGSYIRREIR VSNQHCAIL+EVFYSHHHY+TYREENSASV+CPS*ARRPEEVHSVLLRLRTTG*QILPGGRVEG*RNGLRYSD*IS*FKA*RFGDV*HLRKHLI+*RWNSDQF*LQFAVIPA*TLVV*K**LMTYTTT YS *S FET TLDS L*K+IRRIQRLY*VLINCFPR LIRKVR**VTM*DRVSGFT SFRKCVKISTRSARYNVPVT*KHI*ETGR TLIYFLMS*PTTKQR*GG*LIKTIARGVGY* I*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGFDH*HSL*DVDRNSQKFYRRLNTRRRLLCFSVGRSEIN*R*FPLKKKERQV L*W LWIRRCES*VYFV GESRI V RFLE SLRR* RRWK TTALTNLIS LKHHGPIVYY ADPFRLVQ**RDS +H D Subject 1996 *SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYCKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QILPGGRVEG*RNGLRYSD*IS*FKA*RFGDV*HLRKHLIV*RWNSDQF*LQFAVIPA*TLVV*K**LMTYTTTIYSITAR*SRFETPTLDSLL*KNIRRIQRLY*VLINCFPRSLIRKVR**VTM*DRVSGFTISFRKCVKISTRSARYNVPVT*KHI*ETGRPTLIYFLMS*PTTKQR*GG*LIKTIARGVGY*MI*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGFDH*HSL*DVDRNSQKFYRRLNTRRRLLCFSVGRSEIN*R*FPLKKKERQVLL*W*LWIRRCES*VYFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD 3735
Range 2: 1995 to 3197 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
864.8 bits(1881) | 0.0 | 387/401(97%) | 0/401(0%) | Minus/Plus |
Query 540 MKRISTTSGIYRLRKLYR*TQGYADSFFRKPGVKHHEIWGT**WP*YNFSYSTLL*RI*ASKMGIGWRPN*VKRRST*VIRK*GKLY*EGNTTRLQPTLCDPL*GIXXXXXXXXXXXRKFSQRTLP*LSTASRRGSLRTASTSHYWITDITRRTC*RLTQWLAL*RLNQLI*GVKVRRRITS*KAFDYLKMEFRPVLITVRRDPGVNTGSLKVIAYDLHYDNIFDNCVVKSFRDTDTGFTVMKEYSTNSAFILSPYKLFSAVFNKEGEMISNDVGSSFRVYNIFSQMCKDINEISEIQRAGYLETYLGDGQADTDIFFDVLTNNKAKVRWLVNKDHSAWCGILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*GCQSRLERTITWF*Y 1742 MKRIST SGI R RKLYR*TQ YADSFFRK GVKHHEIWG **WP*YNFSYSTLL*RI*ASK GIGWRPN*VKR+ST*VIRK*GKLY*EGNT RLQPTLCDP *GILLTPPL YL*RRKFSQR LP*LSTASRRGSLRTASTSHYWITDITRRTC*RLTQWLAL*RLNQLI*GVKVRRRITS*KAFD LKMEFRPVLITVRRDPGVNTGSLKVIAYDLHYDNIFDNC VKSFRDTDTGFTVMKEYSTNSAFILSPYKLFSAVFNKEGEMISNDVGSSFRVYNIFSQMCKDINEISEIQRAGYLETYLGDGQADTDIFFDVLTNNKAKVRWLVNKDHSAWCGILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*GCQSRLERTITWF*Y Subject 1995 MKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLL*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDITRRTC*RLTQWLAL*RLNQLI*GVKVRRRITS*KAFDCLKMEFRPVLITVRRDPGVNTGSLKVIAYDLHYDNIFDNCAVKSFRDTDTGFTVMKEYSTNSAFILSPYKLFSAVFNKEGEMISNDVGSSFRVYNIFSQMCKDINEISEIQRAGYLETYLGDGQADTDIFFDVLTNNKAKVRWLVNKDHSAWCGILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*GCQSRLERTITWF*Y 3197
Range 3: 1997 to 3124 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
823.6 bits(1791) | 0.0 | 363/376(97%) | 0/376(0%) | Minus/Plus |
Query 613 EADIYDERYLPITEALQINARLRRLVLSKAGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAMACAIAIKSANLRRKGSETYNILESI*LSKDGIQTSFNYSSP*SRRKHW*FESDSL*LTLRQHIRQLCGKVISRH*HWIHRYERVFDEFSVYTKSL*TVFRGF**GR*DDK*RCRIEFQGLQHLFANV*RYQRDQRDTTCRLPRNIFRRRAG*H*YIF*CLNQQQSKGKVVS**RP*RVVWDIERFEVGREQQGEI*GERHTRYLRFIV*LSRV*MK 1740 EADIYDERYLPITEALQINARLRRLVLSK GSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAMACAIAIKSANLRRKGSETYNILESI*LSKDGIQTSFNYSSP*SRRKHW*FESDSL*LTLRQ+IR L GKV+SRH HWIH YER+FDEFSVYTKSL*TVFRG **GR*DDK*RCRIEFQGLQ+LFANV*RYQRDQRDTTCRL RNIFRRRAG H*YIF*CLNQQQSKGKVVS**RP*RVVWDIE FEVGREQQGEI*GERHTRYLRFIV*LSRV*MK Subject 1997 EADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAMACAIAIKSANLRRKGSETYNILESI*LSKDGIQTSFNYSSP*SRRKHW*FESDSL*LTLRQYIR*LRGKVVSRHRHWIHCYERIFDEFSVYTKSL*TVFRGL**GR*DDK*RCRIEFQGLQYLFANV*RYQRDQRDTTCRLLRNIFRRRAGRH*YIF*CLNQQQSKGKVVS**RP*RVVWDIE*FEVGREQQGEI*GERHTRYLRFIV*LSRV*MK 3124
Range 4: 2763 to 3734 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
669.1 bits(1454) | 0.0 | 306/324(94%) | 0/324(0%) | Plus/Minus |
Query 3 SRCTGLSRHYCTRRKGSAR**TIGP*CFNLEMRLVSAVVCFHLLLYLRRLVSRNLCTLILDSPLTKYT*LSQRRIHKHHYKNTCLSFFLSGNYL*LISLLPTLKQXXXXXXXXXXXNFWLFLSTSYRLC**SKPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPLQIVQYPTPRAMVFIN*PPYLCFVVG*DIKKYISVSLPVS*ICF*VTGTLYLADLVDIFTHLRKDVVNPETRSYIVTYHLTFLIKNRGKQF 974 S+C LSRHYCTRRKGSA+**TIGP*CFN EMRLVSAVV FHLL+YLR+L SRNL T ILDSP TKYT*LSQRRIH HHY NTCLSFFLSGNYL*LISLLPTLKQRSRRRVLSLR*NFWLFLSTSYRLC**SKPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPLQI+QYPTPRAMVFIN*PPYLCFVVG*DIKKYISV LPVS*ICF*VTGTLYLADLVDIFTHLRKD+VNPETRSYIVTYHLTFLIK+RGKQF Subject 2763 SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKYT*LSQRRIHNHHYNNTCLSFFLSGNYL*LISLLPTLKQRSRRRVLSLR*NFWLFLSTSYRLC**SKPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPLQIIQYPTPRAMVFIN*PPYLCFVVG*DIKKYISVGLPVS*ICF*VTGTLYLADLVDIFTHLRKDIVNPETRSYIVTYHLTFLIKDRGKQF 3734
Range 5: 1997 to 3022 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
661.8 bits(1438) | 0.0 | 324/342(95%) | 0/342(0%) | Plus/Minus |
Query 715 NIPHHALWSXXXXXXXXXXXXVKTSKNISVSACPSPKYVSR*PARCXXXXXXXXXHICEKML*TLKXXXXXXXXXXXXXXKTAENSL*GLSINAEFVEYSFITVNPVSVSRNDFTTQLSNMLS*CKS*AITFKLPVFTPGSRRTVIKTGLNSIFR*SNAF*DVIRLRTFTP*IS*FNRYSASHCVSLQHVRRVISVIQ*CEVEAVRSEPLRDAVLS*GSVRWLNFLLYK*RNGGVSKIPHKGSHSVGWRRVVFPS*YSFPYFRITQVDLLLT*FGLHPIPIFDAYILYSRVEYEKLYHGHYHVPHISWCLTPGFRKNESA*PCVYL*SFRNR*IPLVVDIRF 1740 NIPHHALWSLLTNHLTFALLLVKTSKNISVSACPSPKYVS+*PARCISLISLISLHICEK+L*TLKLDPTSLLIISPSLLKTAENSL*GLSINAEFVEYSFITVNPVSVSRNDFT QLSN+LS*CKS*AITFKLPVFTPGSRRTVIKTGLNSIFR SNAF*DVIRLRTFTP*IS*FNRYSASHCVSLQHVRRVISVIQ*CEVEAVRSEPLRDAVLS*GS+RWLNFLLYK* NGGVSKIPH+GSHSVGWRR+VFPS*YSFPYFRIT VD LLT*FGLHPIP+FDAYILYSRVEYEKLYHGHYH+PHISWCLTP FRKNESA* CVYL*SFR R IPL+VDIRF Subject 1997 NIPHHALWSLLTNHLTFALLLVKTSKNISVSACPSPKYVSK*PARCISLISLISLHICEKIL*TLKLDPTSLLIISPSLLKTAENSL*GLSINAEFVEYSFITVNPVSVSRNDFTAQLSNILS*CKS*AITFKLPVFTPGSRRTVIKTGLNSIFRQSNAF*DVIRLRTFTP*IS*FNRYSASHCVSLQHVRRVISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYSRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRF 3022
Range 6: 3173 to 3736 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
412.1 bits(893) | 0.0 | 179/188(95%) | 0/188(0%) | Minus/Plus |
Query 1 TNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKALITNTVCKMSIETARSFIGDLILVADSSVSALEEAKSIRDNFRLRKRRGKYFYSGVCGSDVAKVRYILSGENRGLGYTDSLKLACVGREGGGNILQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILI 564 TNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKALITNTVCKMSIETARSFIGDLILVADSSVSALEEAKSI+DNFRLRKRRGKY+YSG CGSDVAKV+YILSGENRGLG DSLKL CVGR+GGGN+LQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILI Subject 3173 TNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKALITNTVCKMSIETARSFIGDLILVADSSVSALEEAKSIKDNFRLRKRRGKYYYSGDCGSDVAKVKYILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILI 3736
Range 7: 3237 to 3728 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
321.8 bits(696) | 0.0 | 149/164(91%) | 0/164(0%) | Minus/Plus |
Query 9 SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL*SLTQSVRCR*KQPEVLSET*YSSPTPLFQRWKKRNQLEIISA*EKGEASIFIVVFVDPTLRKLGIFCQGRIED*GTQIP*N*PA*VEKEVETYYSTY*SHL*VKASWTYRLLSCRSFPPCTIMT*QPCT 500 SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL*SLTQSVRCR*KQPEVLSET*YSSPTPLFQRWKKRNQL+IISA*EKGEASI IVV VDPTLRKL IFC GRIED G IP*+* A*V+KEVETYYSTY*SHL VKASWTYRLL CRSFPPCTIMT*Q T Subject 3237 SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL*SLTQSVRCR*KQPEVLSET*YSSPTPLFQRWKKRNQLKIISA*EKGEASIIIVVIVDPTLRKLSIFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFT 3728
Range 8: 3083 to 3418 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
256.7 bits(554) | 0.0 | 112/112(100%) | 0/112(0%) | Plus/Minus |
Query 319 GVGDEY*VSDKTSGCFYRHLTDCVSDQSLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QP*DKIAERKQLHLNPG*SDDKT*V 654 GVGDEY*VSDKTSGCFYRHLTDCVSDQSLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QP*DKIAERKQLHLNPG*SDDKT*V Subject 3083 GVGDEY*VSDKTSGCFYRHLTDCVSDQSLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QP*DKIAERKQLHLNPG*SDDKT*V 3418
Range 9: 1996 to 2313 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.0 bits(489) | 0.0 | 103/106(97%) | 0/106(0%) | Plus/Minus |
Query 1424 KYLIKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIMFPISRGV*LPAFERTSLRSLAFICRASVIGKYRSS*ISAS 1741 KYL+KDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATI+FPISRGV*LP FERTSLRSLAFICRASVIGKYRSS*ISAS Subject 1996 KYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISAS 2313
Range 10: 2424 to 2723 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
203.6 bits(438) | 0.0 | 91/100(91%) | 0/100(0%) | Plus/Minus |
Query 1014 FHNGESSVSVSK*LYHTIVEYXXXXXXISYHFQTTSVYAGITANCN*NWSEFHL*IIKCFLRCYTSPNLYALN*LI*SL*RKPLR*PSTRPPGNICYPVV 1313 FHN ESSV VSK LY ++EY+VVV*VISYHFQTTSVYAGITANCN*NWSEFHL* IKCFLRCYTSPNLYALN*LI*SL*RKPLR*PSTRPPGNICYPVV Subject 2424 FHNSESSVGVSKRLYRAVIEYIVVV*VISYHFQTTSVYAGITANCN*NWSEFHL*TIKCFLRCYTSPNLYALN*LI*SL*RKPLR*PSTRPPGNICYPVV 2723
Range 11: 3499 to 3735 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
172.4 bits(370) | 0.0 | 71/79(90%) | 0/79(0%) | Plus/Minus |
Query 2 IKMYRAVTSLLYKAERICTIINDRSMML*PRDEISKCCSMFPPPSLPTQASFKESVYPNPRFSPDKIYLTFATSDPQTP 238 IKM AVTSLLYKAERICTIINDRSMML*PRDEISKCCS FPPP LPTQ SFKES +PNPRFSPDKIYLTFATSDPQ+P Subject 3499 IKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKIYLTFATSDPQSP 3735
Range 12: 2356 to 2952 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
390.5 bits(846) | 0.0 | 187/199(94%) | 0/199(0%) | Plus/Minus |
Query 785 HQKIYQCQPARLLNMFLGNRHVVSR*SR*YLYTFAKRCCKP*NSILHRYLSSHLPY*KPRKTVYKDLV*TLNSSNTLS*R*IQCQCLEMTLPHNCRICCRSVSHKLSLSNYQCLRRDHGEL*LKLV*IPSLDNQMLSKMLYVSEPLRLKXXXXXXXXXXXXXXFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG 1381 HQKIYQC+PARLLNMFL NRHVVSR*SR*YLYTFAKR CKP*NSILHRYLSSHLPY*+PRKTVYKDLV*TLNSSN LS*+*IQC+CLE TLP + RI CRSVSHKLSLSNYQCLRRDHGEL*LKLV*IPSLDNQMLSKMLYVSEPLRLKLADLIAIAQAIALAFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG Subject 2356 HQKIYQCRPARLLNMFLSNRHVVSR*SR*YLYTFAKRYCKP*NSILHRYLSSHLPY*RPRKTVYKDLV*TLNSSNILS*Q*IQCRCLETTLPRSYRIYCRSVSHKLSLSNYQCLRRDHGEL*LKLV*IPSLDNQMLSKMLYVSEPLRLKLADLIAIAQAIALAFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG 2952
Range 13: 3455 to 3736 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
160.1 bits(343) | 0.0 | 78/94(83%) | 0/94(0%) | Plus/Minus |
Query 1 DQDVQGCHVIIVQGGKDLHDNKR*VHDALT*R*D**VL*YVSTSFSTYAG*FQGICVP*SSILP*QNIPNFRNVGSTNTTIKILASPFS*AEII 282 +Q+V+ CHVIIVQGGKDLH+NKR*VHDALT R*D**VL*YVSTS STYA * QGI P SSILP QNI NFRNVGST TTI ILASPFS*AEII Subject 3455 NQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNILNFRNVGSTITTIIILASPFS*AEII 3736
Range 14: 1995 to 2213 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
153.2 bits(328) | 0.0 | 67/73(92%) | 0/73(0%) | Plus/Minus |
Query 1524 FDLIRSPPYTHL*RLYSLQ*SRVRKVVSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH 1742 FDLIRSPPYT L*RLYSLQ*SRVRKVVSWPLS SPYLVVFDSRLSKERVCV LRLSVELP S NTA RRYPLH Subject 1995 FDLIRSPPYTRL*RLYSLQ*SRVRKVVSWPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH 2213
Range 15: 3226 to 3450 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
133.9 bits(286) | 0.0 | 75/75(100%) | 0/75(0%) | Plus/Minus |
Query 287 IDFXXXXXXXXXXXXXIKSPIKLLAVSIDILQTVLVIKAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL 511 IDFASSNAETEESATSIKSPIKLLAVSIDILQTVLVIKAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL Subject 3226 IDFASSNAETEESATSIKSPIKLLAVSIDILQTVLVIKAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL 3450
Range 16: 3013 to 3174 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.4 bits(263) | 0.0 | 53/54(98%) | 0/54(0%) | Plus/Minus |
Query 563 VLSDFDNLKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSNRSISH 724 VLSDFDNLKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSN SISH Subject 3013 VLSDFDNLKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSNHSISH 3174
Grapevine leafroll associated virus 3 isolate 6 18 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130300.1 Length: 4711 Number of Matches: 17
Range 1: 1996 to 3735 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1175.5 bits(2559) | 0.0 | 541/580(93%) | 0/580(0%) | Minus/Plus |
Query 2 *SGYLRRAVFTDYGSSTDKRKATQTRSFESRESNTTRYGEHDSGHDTTFRTLLYCKEYKRQRWV*GGDRIRSKEGLLELFGSKGSYIRREIRRVSNQHCAILYEVFYSHHHYATYREENSASVHCPS*ARRPEEVHSVLLRLRTTG*QILPGGRVEG*RNGLRYSD*IS*FKA*RFGDV*HLRKHLII*RWNSDQF*LQFAVIPA*TLVV*K**LMXXXXXXXXTIVW*SHFETLTLDSPL*KSIRRIQRLY*VLINCFPRFLIRKVR**VTM*DRVSGFTTSFRKCVKISTRSARYNVPVT*KHI*ETGRLTLIYFLMS*PTTKQR*GG*LIKTIARGVGY*TI*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGFDH*HSL*DVDRNSQKFYRRLNTRRRLLCFSVGRSEIN*R*FPLKKKERQVFL*WCLWIRRCES*VYFVRGESRIRVHRFLETSLRR*RRRWKHTTALTNLISRLKHHGPIVYYRADPFRLVQ**RDSPVHLD 1741 *SGYLR AVF D GSSTDKRK TQTRSFE RESNTTRYGE+DSGHDTTFRTLLYCKEYKRQR V*GGDRIRSKE LL+LFGSKGSYIRREIR VSNQHCAIL+EVFYSHHHY+TYREENSASV+CPS*ARRPEEVHSVLLRLRTTG*QILPGGRVEG*RNGLRYSD*IS*FKA*RFGDV*HLRKHLII*RWNSDQF*LQFAVIPA*TLVV*K**LMTYTTT YS *S FET TLDS L*K+IRRIQRLY*VLINCFPR LIRKVR**VTM*DRVSGFT SFRKCVKISTRSARYNVPVT*KHI*ETGRLTLIYFLMS*PTTKQR*GG*LIKTIARGVGY* I*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGFDH*HSL*DVDRNSQKFYRRLNTR RLLCFSVGRSEIN*R*FPLKKKERQV L*W LWIRRCES*VYFV GESRI V RFLE SLRR* RRWK TTALTNLIS LKHHGPIVYY ADPFRLVQ**RDS +H D Subject 1996 *SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYCKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QILPGGRVEG*RNGLRYSD*IS*FKA*RFGDV*HLRKHLII*RWNSDQF*LQFAVIPA*TLVV*K**LMTYTTTIYSITAR*SRFETPTLDSLL*KNIRRIQRLY*VLINCFPRSLIRKVR**VTM*DRVSGFTISFRKCVKISTRSARYNVPVT*KHI*ETGRLTLIYFLMS*PTTKQR*GG*LIKTIARGVGY*MI*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGFDH*HSL*DVDRNSQKFYRRLNTRCRLLCFSVGRSEIN*R*FPLKKKERQVLL*W*LWIRRCES*VYFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD 3735
Range 2: 1995 to 3197 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
865.2 bits(1882) | 0.0 | 387/401(97%) | 0/401(0%) | Minus/Plus |
Query 540 MKRISTTSGIYRLRKLYR*TQGYADSFFRKPGVKHHEIWGT**WP*YNFSYSTLL*RI*ASKMGIGWRPN*VKRRST*VIRK*GKLY*EGNTTRLQPTLCDPL*GIXXXXXXXXXXXRKFSQRTLP*LSTASRRGSLRTASTSHYWITDITRRTC*RLTQWLAL*RLNQLI*GVKVRRRITS*KAFDYLKMEFRPVLITVRRDPGVNTGSLKVIAYDLHYDNIFDNCVVKSFRDTDTGFTVMKEYSTNSAFILSPYKLFSAVFNKEGEMISNDVGSSFRVYNIFSQMCKDINEISEIQRAGYLETYLGDGQADTDIFFDVLTNNKAKVRWLVNKDHSAWCGILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*GCQSRLERTITWF*Y 1742 MKRIST SGI R RKLYR*TQ YADSFFRK GVKHHEIWG **WP*YNFSYSTLL*RI*ASK GIGWRPN*VKR+ST*VIRK*GKLY*EGNT RLQPTLCDP *GILLTPPL YL*RRKFSQR LP*LSTASRRGSLRTASTSHYWITDITRRTC*RLTQWLAL*RLNQLI*GVKVRRRITS*KAFDYLKMEFRPVLITVRRD GVNTGSLKVIAYDLHYDNIFDNC VKSFRDTDTGFTVMKEYSTNSAFILSPYKLFSAVFNKEGEMISNDVGSSFRVYNIFSQMCKDINEISEIQRAGYLETYLGDGQADTDIFFDVLTNNKAKVRWLVNKDHSAWCGILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*GCQSRLERTITWF*Y Subject 1995 MKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLL*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDITRRTC*RLTQWLAL*RLNQLI*GVKVRRRITS*KAFDYLKMEFRPVLITVRRDTGVNTGSLKVIAYDLHYDNIFDNCAVKSFRDTDTGFTVMKEYSTNSAFILSPYKLFSAVFNKEGEMISNDVGSSFRVYNIFSQMCKDINEISEIQRAGYLETYLGDGQADTDIFFDVLTNNKAKVRWLVNKDHSAWCGILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*GCQSRLERTITWF*Y 3197
Range 3: 1997 to 3124 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
827.7 bits(1800) | 0.0 | 364/376(97%) | 0/376(0%) | Minus/Plus |
Query 613 EADIYDERYLPITEALQINARLRRLVLSKAGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAMACAIAIKSANLRRKGSETYNILESI*LSKDGIQTSFNYSSP*SRRKHW*FESDSL*LTLRQHIRQLCGKVISRH*HWIHRYERVFDEFSVYTKSL*TVFRGF**GR*DDK*RCRIEFQGLQHLFANV*RYQRDQRDTTCRLPRNIFRRRAG*H*YIF*CLNQQQSKGKVVS**RP*RVVWDIERFEVGREQQGEI*GERHTRYLRFIV*LSRV*MK 1740 EADIYDERYLPITEALQINARLRRLVLSK GSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAMACAIAIKSANLRRKGSETYNILESI*LSKDGIQTSFNYSSP* RRKHW*FESDSL*LTLRQ+IR L GKV+SRH HWIH YER+FDEFSVYTKSL*TVFRG **GR*DDK*RCRIEFQGLQ+LFANV*RYQRDQRDTTCRLPRNIFRRRAG*H*YIF*CLNQQQSKGKVVS**RP*RVVWDIE FEVGREQQGEI*GERHTRYLRFIV*LSRV*MK Subject 1997 EADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAMACAIAIKSANLRRKGSETYNILESI*LSKDGIQTSFNYSSP*YRRKHW*FESDSL*LTLRQYIR*LRGKVVSRHRHWIHCYERIFDEFSVYTKSL*TVFRGL**GR*DDK*RCRIEFQGLQYLFANV*RYQRDQRDTTCRLPRNIFRRRAG*H*YIF*CLNQQQSKGKVVS**RP*RVVWDIE*FEVGREQQGEI*GERHTRYLRFIV*LSRV*MK 3124
Range 4: 2763 to 3734 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
671.0 bits(1458) | 0.0 | 306/324(94%) | 0/324(0%) | Plus/Minus |
Query 3 SRCTGLSRHYCTRRKGSAR**TIGP*CFNLEMRLVSAVVCFHLLLYLRRLVSRNLCTLILDSPLTKYT*LSQRRIHKHHYKNTCLSFFLSGNYL*LISLLPTLKQXXXXXXXXXXXNFWLFLSTSYRLC**SKPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPLQIVQYPTPRAMVFIN*PPYLCFVVG*DIKKYISVSLPVS*ICF*VTGTLYLADLVDIFTHLRKDVVNPETRSYIVTYHLTFLIKNRGKQF 974 S+C LSRHYCTRRKGSA+**TIGP*CFN EMRLVSAVV FHLL+YLR+L SRNL T ILDSP TKYT*LSQRRIH HHY NTCLSFFLSGNYL*LISLLPTLKQRSR+RVLSLR*NFWLFLSTSYRLC**SKPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPLQI+QYPTPRAMVFIN*PPYLCFVVG*DIKKYISVSLPVS*ICF*VTGTLYLADLVDIFTHLRKD+VNPETRSYIVTYHLTFLIK+RGKQF Subject 2763 SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKYT*LSQRRIHNHHYNNTCLSFFLSGNYL*LISLLPTLKQRSRQRVLSLR*NFWLFLSTSYRLC**SKPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPLQIIQYPTPRAMVFIN*PPYLCFVVG*DIKKYISVSLPVS*ICF*VTGTLYLADLVDIFTHLRKDIVNPETRSYIVTYHLTFLIKDRGKQF 3734
Range 5: 1997 to 3022 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
661.3 bits(1437) | 0.0 | 325/342(95%) | 0/342(0%) | Plus/Minus |
Query 715 NIPHHALWSXXXXXXXXXXXXVKTSKNISVSACPSPKYVSR*PARCXXXXXXXXXHICEKML*TLKXXXXXXXXXXXXXXKTAENSL*GLSINAEFVEYSFITVNPVSVSRNDFTTQLSNMLS*CKS*AITFKLPVFTPGSRRTVIKTGLNSIFR*SNAF*DVIRLRTFTP*IS*FNRYSASHCVSLQHVRRVISVIQ*CEVEAVRSEPLRDAVLS*GSVRWLNFLLYK*RNGGVSKIPHKGSHSVGWRRVVFPS*YSFPYFRITQVDLLLT*FGLHPIPIFDAYILYSRVEYEKLYHGHYHVPHISWCLTPGFRKNESA*PCVYL*SFRNR*IPLVVDIRF 1740 NIPHHALWSLLTNHLTFALLLVKTSKNISVSACPSPKYVSR*PARCISLISLISLHICEK+L*TLKLDPTSLLIISPSLLKTAENSL*GLSINAEFVEYSFITVNPVSVSRNDFT QLSN+LS*CKS*AITFKLPVFTP SRRTVIKTGLNSIFR*SNAF*DVIRLRTFTP*IS*FNRYSASHCVSLQHVRRVISVIQ*CEVEAVRSEPLRDAVLS*GS+RWLNFLLYK* NGGVSKIPH+GSHSVGWRR+VFPS*YSFPYFRIT VD LLT*FGLHPIP+FDAYILYSRVEYEKLYHGHYH+PHISWCLTP FRKNESA* CVYL*SFR R IPL+VDIRF Subject 1997 NIPHHALWSLLTNHLTFALLLVKTSKNISVSACPSPKYVSR*PARCISLISLISLHICEKIL*TLKLDPTSLLIISPSLLKTAENSL*GLSINAEFVEYSFITVNPVSVSRNDFTAQLSNILS*CKS*AITFKLPVFTPVSRRTVIKTGLNSIFR*SNAF*DVIRLRTFTP*IS*FNRYSASHCVSLQHVRRVISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYSRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRF 3022
Range 6: 3173 to 3736 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
412.1 bits(893) | 0.0 | 179/188(95%) | 0/188(0%) | Minus/Plus |
Query 1 TNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKALITNTVCKMSIETARSFIGDLILVADSSVSALEEAKSIRDNFRLRKRRGKYFYSGVCGSDVAKVRYILSGENRGLGYTDSLKLACVGREGGGNILQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILI 564 TNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKALITNTVCKMSIETARSFIGDLILVADSSVSALEEAKSI+DNFRLRKRRGKY+YSG CGSDVAKV+YILSGENRGLG DSLKL CVGR+GGGN+LQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILI Subject 3173 TNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKALITNTVCKMSIETARSFIGDLILVADSSVSALEEAKSIKDNFRLRKRRGKYYYSGDCGSDVAKVKYILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILI 3736
Range 7: 3237 to 3728 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
319.1 bits(690) | 0.0 | 148/164(90%) | 0/164(0%) | Minus/Plus |
Query 9 SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL*SLTQSVRCR*KQPEVLSET*YSSPTPLFQRWKKRNQLEIISA*EKGEASIFIVVFVDPTLRKLGIFCQGRIED*GTQIP*N*PA*VEKEVETYYSTY*SHL*VKASWTYRLLSCRSFPPCTIMT*QPCT 500 SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL*SLTQSVRCR*KQPEVLSET*YS PTPLFQRWKKRNQL+IISA*EKGEASI IVV VDPTLRKL IFC GRIED G IP*+* A*V+KEVETYYSTY*SHL VKASWTYRLL CRSFPPCTIMT*Q T Subject 3237 SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL*SLTQSVRCR*KQPEVLSET*YSLPTPLFQRWKKRNQLKIISA*EKGEASIIIVVIVDPTLRKLSIFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFT 3728
Range 8: 3083 to 3418 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
254.5 bits(549) | 0.0 | 111/112(99%) | 0/112(0%) | Plus/Minus |
Query 319 GVGDEY*VSDKTSGCFYRHLTDCVSDQSLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QP*DKIAERKQLHLNPG*SDDKT*V 654 GVG+EY*VSDKTSGCFYRHLTDCVSDQSLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QP*DKIAERKQLHLNPG*SDDKT*V Subject 3083 GVGNEY*VSDKTSGCFYRHLTDCVSDQSLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QP*DKIAERKQLHLNPG*SDDKT*V 3418
Range 9: 1996 to 2313 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.0 bits(489) | 0.0 | 103/106(97%) | 0/106(0%) | Plus/Minus |
Query 1424 KYLIKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIMFPISRGV*LPAFERTSLRSLAFICRASVIGKYRSS*ISAS 1741 KYL+KDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATI+FPISRGV*LP FERTSLRSLAFICRASVIGKYRSS*ISAS Subject 1996 KYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISAS 2313
Range 10: 2424 to 2723 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
205.9 bits(443) | 0.0 | 92/100(92%) | 0/100(0%) | Plus/Minus |
Query 1014 FHNGESSVSVSK*LYHTIVEYXXXXXXISYHFQTTSVYAGITANCN*NWSEFHL*IIKCFLRCYTSPNLYALN*LI*SL*RKPLR*PSTRPPGNICYPVV 1313 FHN ESSV VSK LY ++EY+VVV*VISYHFQTTSVYAGITANCN*NWSEFHL*IIKCFLRCYTSPNLYALN*LI*SL*RKPLR*PSTRPPGNICYPVV Subject 2424 FHNSESSVGVSKRLYRAVIEYIVVV*VISYHFQTTSVYAGITANCN*NWSEFHL*IIKCFLRCYTSPNLYALN*LI*SL*RKPLR*PSTRPPGNICYPVV 2723
Range 11: 3499 to 3735 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
172.4 bits(370) | 0.0 | 71/79(90%) | 0/79(0%) | Plus/Minus |
Query 2 IKMYRAVTSLLYKAERICTIINDRSMML*PRDEISKCCSMFPPPSLPTQASFKESVYPNPRFSPDKIYLTFATSDPQTP 238 IKM AVTSLLYKAERICTIINDRSMML*PRDEISKCCS FPPP LPTQ SFKES +PNPRFSPDKIYLTFATSDPQ+P Subject 3499 IKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKIYLTFATSDPQSP 3735
Range 12: 2356 to 2952 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
391.0 bits(847) | 0.0 | 188/199(94%) | 0/199(0%) | Plus/Minus |
Query 785 HQKIYQCQPARLLNMFLGNRHVVSR*SR*YLYTFAKRCCKP*NSILHRYLSSHLPY*KPRKTVYKDLV*TLNSSNTLS*R*IQCQCLEMTLPHNCRICCRSVSHKLSLSNYQCLRRDHGEL*LKLV*IPSLDNQMLSKMLYVSEPLRLKXXXXXXXXXXXXXXFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG 1381 HQKIYQCQPARLLNMFLGNRHVVSR*SR*YLYTFAKR CKP*NSILHRYLSSHLPY*+PRKTVYKDLV*TLNSSN LS*+*IQC+CLE TLP + RI CRSVSHKLSLSNYQCLRR HGEL*LKLV*IPSLDNQMLSKMLYVSEPLRLKLADLIAIAQAIALAFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG Subject 2356 HQKIYQCQPARLLNMFLGNRHVVSR*SR*YLYTFAKRYCKP*NSILHRYLSSHLPY*RPRKTVYKDLV*TLNSSNILS*Q*IQCRCLETTLPRSYRIYCRSVSHKLSLSNYQCLRRYHGEL*LKLV*IPSLDNQMLSKMLYVSEPLRLKLADLIAIAQAIALAFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG 2952
Range 13: 3455 to 3736 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
160.1 bits(343) | 0.0 | 78/94(83%) | 0/94(0%) | Plus/Minus |
Query 1 DQDVQGCHVIIVQGGKDLHDNKR*VHDALT*R*D**VL*YVSTSFSTYAG*FQGICVP*SSILP*QNIPNFRNVGSTNTTIKILASPFS*AEII 282 +Q+V+ CHVIIVQGGKDLH+NKR*VHDALT R*D**VL*YVSTS STYA * QGI P SSILP QNI NFRNVGST TTI ILASPFS*AEII Subject 3455 NQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNILNFRNVGSTITTIIILASPFS*AEII 3736
Range 14: 1995 to 2213 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
153.2 bits(328) | 0.0 | 67/73(92%) | 0/73(0%) | Plus/Minus |
Query 1524 FDLIRSPPYTHL*RLYSLQ*SRVRKVVSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH 1742 FDLIRSPPYT L*RLYSLQ*SRVRKVVSWPLS SPYLVVFDSRLSKERVCV LRLSVELP S NTA RRYPLH Subject 1995 FDLIRSPPYTRL*RLYSLQ*SRVRKVVSWPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH 2213
Range 15: 3226 to 3450 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
133.9 bits(286) | 0.0 | 75/75(100%) | 0/75(0%) | Plus/Minus |
Query 287 IDFXXXXXXXXXXXXXIKSPIKLLAVSIDILQTVLVIKAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL 511 IDFASSNAETEESATSIKSPIKLLAVSIDILQTVLVIKAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL Subject 3226 IDFASSNAETEESATSIKSPIKLLAVSIDILQTVLVIKAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL 3450
Range 16: 3013 to 3174 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.4 bits(263) | 0.0 | 53/54(98%) | 0/54(0%) | Plus/Minus |
Query 563 VLSDFDNLKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSNRSISH 724 VLSDFDNLKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSN SISH Subject 3013 VLSDFDNLKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSNHSISH 3174
Grapevine leafroll associated virus 3 isolate 8 6 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130315.1 Length: 4711 Number of Matches: 17
Range 1: 1996 to 3735 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1175.5 bits(2559) | 0.0 | 541/580(93%) | 0/580(0%) | Minus/Plus |
Query 2 *SGYLRRAVFTDYGSSTDKRKATQTRSFESRESNTTRYGEHDSGHDTTFRTLLYCKEYKRQRWV*GGDRIRSKEGLLELFGSKGSYIRREIRRVSNQHCAILYEVFYSHHHYATYREENSASVHCPS*ARRPEEVHSVLLRLRTTG*QILPGGRVEG*RNGLRYSD*IS*FKA*RFGDV*HLRKHLII*RWNSDQF*LQFAVIPA*TLVV*K**LMXXXXXXXXTIVW*SHFETLTLDSPL*KSIRRIQRLY*VLINCFPRFLIRKVR**VTM*DRVSGFTTSFRKCVKISTRSARYNVPVT*KHI*ETGRLTLIYFLMS*PTTKQR*GG*LIKTIARGVGY*TI*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGFDH*HSL*DVDRNSQKFYRRLNTRRRLLCFSVGRSEIN*R*FPLKKKERQVFL*WCLWIRRCES*VYFVRGESRIRVHRFLETSLRR*RRRWKHTTALTNLISRLKHHGPIVYYRADPFRLVQ**RDSPVHLD 1741 *SGYLR AVF D GSSTDKRK TQTRSFE RESNTTRYGE+DSGHDTTFRTLLYCKEYKRQR V*GGDRIRSKE LL+LFGSKGSYIRREIR VSNQHCAIL+EVFYSHHHY TYREENSASV+CPS*ARRPEEVHSVLLRLRTTG*QILPGGRVEG*RNGLRYSD*IS FKA*RFGDV*HLRKHLII*RWNSDQF*LQFAVIPA*TLVV*K**LMTYTTT YS *S FET TLDS L*K+IRRIQRLY*VLINCFPR LIRKVR**VTM*DRVSGFT SFRKCVKISTRSARYNVPVT*KHI*ETGRLTLIYFLMS*PTTKQR*GG*LIKTIARGVGY* I*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGFDH*HSL*DVDRNSQKFYRRLNTRRRLLCFSVGRSEIN*R*FPLKKKERQV L*W LWIRRCES*VYFV GESRI V RFLE SLRR* RRWK TTALTNLIS LKHHGPIVYY ADPFRLVQ**RDS +H D Subject 1996 *SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYCKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYFTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QILPGGRVEG*RNGLRYSD*ISQFKA*RFGDV*HLRKHLII*RWNSDQF*LQFAVIPA*TLVV*K**LMTYTTTIYSITAR*SRFETPTLDSLL*KNIRRIQRLY*VLINCFPRSLIRKVR**VTM*DRVSGFTISFRKCVKISTRSARYNVPVT*KHI*ETGRLTLIYFLMS*PTTKQR*GG*LIKTIARGVGY*MI*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGFDH*HSL*DVDRNSQKFYRRLNTRRRLLCFSVGRSEIN*R*FPLKKKERQVLL*W*LWIRRCES*VYFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD 3735
Range 2: 1995 to 3197 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
865.7 bits(1883) | 0.0 | 387/401(97%) | 0/401(0%) | Minus/Plus |
Query 540 MKRISTTSGIYRLRKLYR*TQGYADSFFRKPGVKHHEIWGT**WP*YNFSYSTLL*RI*ASKMGIGWRPN*VKRRST*VIRK*GKLY*EGNTTRLQPTLCDPL*GIXXXXXXXXXXXRKFSQRTLP*LSTASRRGSLRTASTSHYWITDITRRTC*RLTQWLAL*RLNQLI*GVKVRRRITS*KAFDYLKMEFRPVLITVRRDPGVNTGSLKVIAYDLHYDNIFDNCVVKSFRDTDTGFTVMKEYSTNSAFILSPYKLFSAVFNKEGEMISNDVGSSFRVYNIFSQMCKDINEISEIQRAGYLETYLGDGQADTDIFFDVLTNNKAKVRWLVNKDHSAWCGILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*GCQSRLERTITWF*Y 1742 MKRIST SGI R RKLYR*TQ YADSFFRK GVKHHEIWG **WP*YNFSYSTLL*RI*ASK GIGWRPN*VKR+ST*VIRK*GKLY*EGNT RLQPTLCDP *GILLTPPL YL*RRKFSQR LP*LSTASRRGSLRTASTSHYWITDITRRTC*RLTQWLAL*RLNQ I*GVKVRRRITS*KAFDYLKMEFRPVLITVRRDPGVNTGSLKVIAYDLHYDNIFDNC VKSFRDTDTGFTVMKEYSTNSAFILSPYKLFSAVFNKEGEMISNDVGSSFRVYNIFSQMCKDINEISEIQRAGYLETYLGDGQADTDIFFDVLTNNKAKVRWLVNKDHSAWCGILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*GCQSRLERTITWF*Y Subject 1995 MKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLL*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDITRRTC*RLTQWLAL*RLNQPI*GVKVRRRITS*KAFDYLKMEFRPVLITVRRDPGVNTGSLKVIAYDLHYDNIFDNCAVKSFRDTDTGFTVMKEYSTNSAFILSPYKLFSAVFNKEGEMISNDVGSSFRVYNIFSQMCKDINEISEIQRAGYLETYLGDGQADTDIFFDVLTNNKAKVRWLVNKDHSAWCGILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*GCQSRLERTITWF*Y 3197
Range 3: 1997 to 3124 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
830.4 bits(1806) | 0.0 | 365/376(97%) | 0/376(0%) | Minus/Plus |
Query 613 EADIYDERYLPITEALQINARLRRLVLSKAGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAMACAIAIKSANLRRKGSETYNILESI*LSKDGIQTSFNYSSP*SRRKHW*FESDSL*LTLRQHIRQLCGKVISRH*HWIHRYERVFDEFSVYTKSL*TVFRGF**GR*DDK*RCRIEFQGLQHLFANV*RYQRDQRDTTCRLPRNIFRRRAG*H*YIF*CLNQQQSKGKVVS**RP*RVVWDIERFEVGREQQGEI*GERHTRYLRFIV*LSRV*MK 1740 EADIYDERYLPITEALQINARLRRLVLSK GSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAMACAIAIKSANLRRKGSETYNILESI*LSKDGIQTSFNYSSP*SRRKHW*FESDSL*LTLRQ+IR L GKV+SRH HWIH YER+FDEFSVYTKSL*TVFRG **GR*DDK*RCRIEFQGLQ+LFANV*RYQRDQRDTTCRLPRNIFRRRAG*H*YIF*CLNQQQSKGKVVS**RP*RVVWDIE FEVGREQQGEI*GERHTRYLRFIV*LSRV*MK Subject 1997 EADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAMACAIAIKSANLRRKGSETYNILESI*LSKDGIQTSFNYSSP*SRRKHW*FESDSL*LTLRQYIR*LRGKVVSRHRHWIHCYERIFDEFSVYTKSL*TVFRGL**GR*DDK*RCRIEFQGLQYLFANV*RYQRDQRDTTCRLPRNIFRRRAG*H*YIF*CLNQQQSKGKVVS**RP*RVVWDIE*FEVGREQQGEI*GERHTRYLRFIV*LSRV*MK 3124
Range 4: 2763 to 3734 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
671.0 bits(1458) | 0.0 | 307/324(95%) | 0/324(0%) | Plus/Minus |
Query 3 SRCTGLSRHYCTRRKGSAR**TIGP*CFNLEMRLVSAVVCFHLLLYLRRLVSRNLCTLILDSPLTKYT*LSQRRIHKHHYKNTCLSFFLSGNYL*LISLLPTLKQXXXXXXXXXXXNFWLFLSTSYRLC**SKPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPLQIVQYPTPRAMVFIN*PPYLCFVVG*DIKKYISVSLPVS*ICF*VTGTLYLADLVDIFTHLRKDVVNPETRSYIVTYHLTFLIKNRGKQF 974 S+C LSRHYCTRRKGSA+**TIGP*CFN EMRLVSAVV FHLL+YLR+L SRNL T ILDSP TKYT*LSQRRIH HHY NTCLSFFLSGNYL*LISLLPTLKQRSRRRVLSLR*NFWLFLSTSYRLC**SKPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPLQI+QYPTPRAMVFIN*PPYLCFVVG*DIKKYISVSLPVS*ICF*VTGTLYLADLVDIFTHLRKD+VNPETRSYIVTYHLTFLIK+RGKQF Subject 2763 SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKYT*LSQRRIHNHHYNNTCLSFFLSGNYL*LISLLPTLKQRSRRRVLSLR*NFWLFLSTSYRLC**SKPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPLQIIQYPTPRAMVFIN*PPYLCFVVG*DIKKYISVSLPVS*ICF*VTGTLYLADLVDIFTHLRKDIVNPETRSYIVTYHLTFLIKDRGKQF 3734
Range 5: 1997 to 3022 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
663.6 bits(1442) | 0.0 | 325/342(95%) | 0/342(0%) | Plus/Minus |
Query 715 NIPHHALWSXXXXXXXXXXXXVKTSKNISVSACPSPKYVSR*PARCXXXXXXXXXHICEKML*TLKXXXXXXXXXXXXXXKTAENSL*GLSINAEFVEYSFITVNPVSVSRNDFTTQLSNMLS*CKS*AITFKLPVFTPGSRRTVIKTGLNSIFR*SNAF*DVIRLRTFTP*IS*FNRYSASHCVSLQHVRRVISVIQ*CEVEAVRSEPLRDAVLS*GSVRWLNFLLYK*RNGGVSKIPHKGSHSVGWRRVVFPS*YSFPYFRITQVDLLLT*FGLHPIPIFDAYILYSRVEYEKLYHGHYHVPHISWCLTPGFRKNESA*PCVYL*SFRNR*IPLVVDIRF 1740 NIPHHALWSLLTNHLTFALLLVKTSKNISVSACPSPKYVSR*PARCISLISLISLHICEK+L*TLKLDPTSLLIISPSLLKTAENSL*GLSINAEFVEYSFITVNPVSVSRNDFT QLSN+LS*CKS*AITFKLPVFTPGSRRTVIKTGLNSIFR*SNAF*DVIRLRTFTP*I *FNRYSASHCVSLQHVRRVISVIQ*CEVEAVRSEPLRDAVLS*GS+RWLNFLLYK* NGGVSKIPH+GSHSVGWRR+VFPS*YSFPYFRIT VD LLT*FGLHPIP+FDAYILYSRVEYEKLYHGHYH+PHISWCLTP FRKNESA* CVYL*SFR R IPL+VDIRF Subject 1997 NIPHHALWSLLTNHLTFALLLVKTSKNISVSACPSPKYVSR*PARCISLISLISLHICEKIL*TLKLDPTSLLIISPSLLKTAENSL*GLSINAEFVEYSFITVNPVSVSRNDFTAQLSNILS*CKS*AITFKLPVFTPGSRRTVIKTGLNSIFR*SNAF*DVIRLRTFTP*IG*FNRYSASHCVSLQHVRRVISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYSRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRF 3022
Range 6: 3173 to 3736 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
412.1 bits(893) | 0.0 | 179/188(95%) | 0/188(0%) | Minus/Plus |
Query 1 TNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKALITNTVCKMSIETARSFIGDLILVADSSVSALEEAKSIRDNFRLRKRRGKYFYSGVCGSDVAKVRYILSGENRGLGYTDSLKLACVGREGGGNILQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILI 564 TNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKALITNTVCKMSIETARSFIGDLILVADSSVSALEEAKSI+DNFRLRKRRGKY+YSG CGSDVAKV+YILSGENRGLG DSLKL CVGR+GGGN+LQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILI Subject 3173 TNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKALITNTVCKMSIETARSFIGDLILVADSSVSALEEAKSIKDNFRLRKRRGKYYYSGDCGSDVAKVKYILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILI 3736
Range 7: 3237 to 3728 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
321.8 bits(696) | 0.0 | 149/164(91%) | 0/164(0%) | Minus/Plus |
Query 9 SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL*SLTQSVRCR*KQPEVLSET*YSSPTPLFQRWKKRNQLEIISA*EKGEASIFIVVFVDPTLRKLGIFCQGRIED*GTQIP*N*PA*VEKEVETYYSTY*SHL*VKASWTYRLLSCRSFPPCTIMT*QPCT 500 SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL*SLTQSVRCR*KQPEVLSET*YSSPTPLFQRWKKRNQL+IISA*EKGEASI IVV VDPTLRKL IFC GRIED G IP*+* A*V+KEVETYYSTY*SHL VKASWTYRLL CRSFPPCTIMT*Q T Subject 3237 SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL*SLTQSVRCR*KQPEVLSET*YSSPTPLFQRWKKRNQLKIISA*EKGEASIIIVVIVDPTLRKLSIFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFT 3728
Range 8: 3083 to 3418 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
256.7 bits(554) | 0.0 | 112/112(100%) | 0/112(0%) | Plus/Minus |
Query 319 GVGDEY*VSDKTSGCFYRHLTDCVSDQSLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QP*DKIAERKQLHLNPG*SDDKT*V 654 GVGDEY*VSDKTSGCFYRHLTDCVSDQSLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QP*DKIAERKQLHLNPG*SDDKT*V Subject 3083 GVGDEY*VSDKTSGCFYRHLTDCVSDQSLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QP*DKIAERKQLHLNPG*SDDKT*V 3418
Range 9: 1996 to 2313 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.0 bits(489) | 0.0 | 103/106(97%) | 0/106(0%) | Plus/Minus |
Query 1424 KYLIKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIMFPISRGV*LPAFERTSLRSLAFICRASVIGKYRSS*ISAS 1741 KYL+KDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATI+FPISRGV*LP FERTSLRSLAFICRASVIGKYRSS*ISAS Subject 1996 KYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISAS 2313
Range 10: 2424 to 2723 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
203.6 bits(438) | 0.0 | 91/100(91%) | 0/100(0%) | Plus/Minus |
Query 1014 FHNGESSVSVSK*LYHTIVEYXXXXXXISYHFQTTSVYAGITANCN*NWSEFHL*IIKCFLRCYTSPNLYALN*LI*SL*RKPLR*PSTRPPGNICYPVV 1313 FHN ESSV VSK LY ++EY+VVV*VISYHFQTTSVYAGITANCN*NWSEFHL*IIKCFLRCYTSPNLYALN LI*SL*RKPLR*PSTRPPGNICYPVV Subject 2424 FHNSESSVGVSKRLYRAVIEYIVVV*VISYHFQTTSVYAGITANCN*NWSEFHL*IIKCFLRCYTSPNLYALNWLI*SL*RKPLR*PSTRPPGNICYPVV 2723
Range 11: 3499 to 3735 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
172.4 bits(370) | 0.0 | 71/79(90%) | 0/79(0%) | Plus/Minus |
Query 2 IKMYRAVTSLLYKAERICTIINDRSMML*PRDEISKCCSMFPPPSLPTQASFKESVYPNPRFSPDKIYLTFATSDPQTP 238 IKM AVTSLLYKAERICTIINDRSMML*PRDEISKCCS FPPP LPTQ SFKES +PNPRFSPDKIYLTFATSDPQ+P Subject 3499 IKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKIYLTFATSDPQSP 3735
Range 12: 2356 to 2952 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
395.1 bits(856) | 0.0 | 189/199(95%) | 0/199(0%) | Plus/Minus |
Query 785 HQKIYQCQPARLLNMFLGNRHVVSR*SR*YLYTFAKRCCKP*NSILHRYLSSHLPY*KPRKTVYKDLV*TLNSSNTLS*R*IQCQCLEMTLPHNCRICCRSVSHKLSLSNYQCLRRDHGEL*LKLV*IPSLDNQMLSKMLYVSEPLRLKXXXXXXXXXXXXXXFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG 1381 HQKIYQCQPARLLNMFLGNRHVVSR*SR*YLYTFAKR CKP*NSILHRYLSSHLPY*+PRKTVYKDLV*TLNSSN LS*+*IQC+CLE TLP + RI CRSVSHKLSLSNYQCLRRDHGEL*LKLV*IPSLDNQMLSKMLYVSEPLRLKLADLIAIAQAIALAFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG Subject 2356 HQKIYQCQPARLLNMFLGNRHVVSR*SR*YLYTFAKRYCKP*NSILHRYLSSHLPY*RPRKTVYKDLV*TLNSSNILS*Q*IQCRCLETTLPRSYRIYCRSVSHKLSLSNYQCLRRDHGEL*LKLV*IPSLDNQMLSKMLYVSEPLRLKLADLIAIAQAIALAFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG 2952
Range 13: 3455 to 3736 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
160.1 bits(343) | 0.0 | 78/94(83%) | 0/94(0%) | Plus/Minus |
Query 1 DQDVQGCHVIIVQGGKDLHDNKR*VHDALT*R*D**VL*YVSTSFSTYAG*FQGICVP*SSILP*QNIPNFRNVGSTNTTIKILASPFS*AEII 282 +Q+V+ CHVIIVQGGKDLH+NKR*VHDALT R*D**VL*YVSTS STYA * QGI P SSILP QNI NFRNVGST TTI ILASPFS*AEII Subject 3455 NQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNILNFRNVGSTITTIIILASPFS*AEII 3736
Range 14: 1995 to 2213 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
153.2 bits(328) | 0.0 | 67/73(92%) | 0/73(0%) | Plus/Minus |
Query 1524 FDLIRSPPYTHL*RLYSLQ*SRVRKVVSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH 1742 FDLIRSPPYT L*RLYSLQ*SRVRKVVSWPLS SPYLVVFDSRLSKERVCV LRLSVELP S NTA RRYPLH Subject 1995 FDLIRSPPYTRL*RLYSLQ*SRVRKVVSWPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH 2213
Range 15: 3226 to 3450 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
133.9 bits(286) | 0.0 | 75/75(100%) | 0/75(0%) | Plus/Minus |
Query 287 IDFXXXXXXXXXXXXXIKSPIKLLAVSIDILQTVLVIKAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL 511 IDFASSNAETEESATSIKSPIKLLAVSIDILQTVLVIKAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL Subject 3226 IDFASSNAETEESATSIKSPIKLLAVSIDILQTVLVIKAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL 3450
Range 16: 3013 to 3174 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.4 bits(263) | 0.0 | 53/54(98%) | 0/54(0%) | Plus/Minus |
Query 563 VLSDFDNLKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSNRSISH 724 VLSDFDNLKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSN SISH Subject 3013 VLSDFDNLKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSNHSISH 3174
Grapevine leafroll associated virus 3 isolate 8 24 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130322.1 Length: 4711 Number of Matches: 17
Range 1: 1996 to 3735 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1175.5 bits(2559) | 0.0 | 541/580(93%) | 0/580(0%) | Minus/Plus |
Query 2 *SGYLRRAVFTDYGSSTDKRKATQTRSFESRESNTTRYGEHDSGHDTTFRTLLYCKEYKRQRWV*GGDRIRSKEGLLELFGSKGSYIRREIRRVSNQHCAILYEVFYSHHHYATYREENSASVHCPS*ARRPEEVHSVLLRLRTTG*QILPGGRVEG*RNGLRYSD*IS*FKA*RFGDV*HLRKHLII*RWNSDQF*LQFAVIPA*TLVV*K**LMXXXXXXXXTIVW*SHFETLTLDSPL*KSIRRIQRLY*VLINCFPRFLIRKVR**VTM*DRVSGFTTSFRKCVKISTRSARYNVPVT*KHI*ETGRLTLIYFLMS*PTTKQR*GG*LIKTIARGVGY*TI*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGFDH*HSL*DVDRNSQKFYRRLNTRRRLLCFSVGRSEIN*R*FPLKKKERQVFL*WCLWIRRCES*VYFVRGESRIRVHRFLETSLRR*RRRWKHTTALTNLISRLKHHGPIVYYRADPFRLVQ**RDSPVHLD 1741 *SGYLR AVF D GSSTDKRK TQTRSFE RESNTTRYGE+DSGHDTTFRTLLYCKEYKRQR V*GGDRIRSKE LL+LFGSKGSYIRREIR VSNQHCAIL+EVFYSHHHY TYREENSASV+CPS*ARRPEEVHSVLLRLRTTG*QILPGGRVEG*RNGLRYSD*IS FKA*RFGDV*HLRKHLII*RWNSDQF*LQFAVIPA*TLVV*K**LMTYTTT YS *S FET TLDS L*K+IRRIQRLY*VLINCFPR LIRKVR**VTM*DRVSGFT SFRKCVKISTRSARYNVPVT*KHI*ETGRLTLIYFLMS*PTTKQR*GG*LIKTIARGVGY* I*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGFDH*HSL*DVDRNSQKFYRRLNTRRRLLCFSVGRSEIN*R*FPLKKKERQV L*W LWIRRCES*VYFV GESRI V RFLE SLRR* RRWK TTALTNLIS LKHHGPIVYY ADPFRLVQ**RDS +H D Subject 1996 *SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYCKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYFTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QILPGGRVEG*RNGLRYSD*ISQFKA*RFGDV*HLRKHLII*RWNSDQF*LQFAVIPA*TLVV*K**LMTYTTTIYSITAR*SRFETPTLDSLL*KNIRRIQRLY*VLINCFPRSLIRKVR**VTM*DRVSGFTISFRKCVKISTRSARYNVPVT*KHI*ETGRLTLIYFLMS*PTTKQR*GG*LIKTIARGVGY*MI*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGFDH*HSL*DVDRNSQKFYRRLNTRRRLLCFSVGRSEIN*R*FPLKKKERQVLL*W*LWIRRCES*VYFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD 3735
Range 2: 1995 to 3197 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
865.7 bits(1883) | 0.0 | 387/401(97%) | 0/401(0%) | Minus/Plus |
Query 540 MKRISTTSGIYRLRKLYR*TQGYADSFFRKPGVKHHEIWGT**WP*YNFSYSTLL*RI*ASKMGIGWRPN*VKRRST*VIRK*GKLY*EGNTTRLQPTLCDPL*GIXXXXXXXXXXXRKFSQRTLP*LSTASRRGSLRTASTSHYWITDITRRTC*RLTQWLAL*RLNQLI*GVKVRRRITS*KAFDYLKMEFRPVLITVRRDPGVNTGSLKVIAYDLHYDNIFDNCVVKSFRDTDTGFTVMKEYSTNSAFILSPYKLFSAVFNKEGEMISNDVGSSFRVYNIFSQMCKDINEISEIQRAGYLETYLGDGQADTDIFFDVLTNNKAKVRWLVNKDHSAWCGILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*GCQSRLERTITWF*Y 1742 MKRIST SGI R RKLYR*TQ YADSFFRK GVKHHEIWG **WP*YNFSYSTLL*RI*ASK GIGWRPN*VKR+ST*VIRK*GKLY*EGNT RLQPTLCDP *GILLTPPL YL*RRKFSQR LP*LSTASRRGSLRTASTSHYWITDITRRTC*RLTQWLAL*RLNQ I*GVKVRRRITS*KAFDYLKMEFRPVLITVRRDPGVNTGSLKVIAYDLHYDNIFDNC VKSFRDTDTGFTVMKEYSTNSAFILSPYKLFSAVFNKEGEMISNDVGSSFRVYNIFSQMCKDINEISEIQRAGYLETYLGDGQADTDIFFDVLTNNKAKVRWLVNKDHSAWCGILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*GCQSRLERTITWF*Y Subject 1995 MKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLL*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDITRRTC*RLTQWLAL*RLNQPI*GVKVRRRITS*KAFDYLKMEFRPVLITVRRDPGVNTGSLKVIAYDLHYDNIFDNCAVKSFRDTDTGFTVMKEYSTNSAFILSPYKLFSAVFNKEGEMISNDVGSSFRVYNIFSQMCKDINEISEIQRAGYLETYLGDGQADTDIFFDVLTNNKAKVRWLVNKDHSAWCGILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*GCQSRLERTITWF*Y 3197
Range 3: 1997 to 3124 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
830.4 bits(1806) | 0.0 | 365/376(97%) | 0/376(0%) | Minus/Plus |
Query 613 EADIYDERYLPITEALQINARLRRLVLSKAGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAMACAIAIKSANLRRKGSETYNILESI*LSKDGIQTSFNYSSP*SRRKHW*FESDSL*LTLRQHIRQLCGKVISRH*HWIHRYERVFDEFSVYTKSL*TVFRGF**GR*DDK*RCRIEFQGLQHLFANV*RYQRDQRDTTCRLPRNIFRRRAG*H*YIF*CLNQQQSKGKVVS**RP*RVVWDIERFEVGREQQGEI*GERHTRYLRFIV*LSRV*MK 1740 EADIYDERYLPITEALQINARLRRLVLSK GSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAMACAIAIKSANLRRKGSETYNILESI*LSKDGIQTSFNYSSP*SRRKHW*FESDSL*LTLRQ+IR L GKV+SRH HWIH YER+FDEFSVYTKSL*TVFRG **GR*DDK*RCRIEFQGLQ+LFANV*RYQRDQRDTTCRLPRNIFRRRAG*H*YIF*CLNQQQSKGKVVS**RP*RVVWDIE FEVGREQQGEI*GERHTRYLRFIV*LSRV*MK Subject 1997 EADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAMACAIAIKSANLRRKGSETYNILESI*LSKDGIQTSFNYSSP*SRRKHW*FESDSL*LTLRQYIR*LRGKVVSRHRHWIHCYERIFDEFSVYTKSL*TVFRGL**GR*DDK*RCRIEFQGLQYLFANV*RYQRDQRDTTCRLPRNIFRRRAG*H*YIF*CLNQQQSKGKVVS**RP*RVVWDIE*FEVGREQQGEI*GERHTRYLRFIV*LSRV*MK 3124
Range 4: 2763 to 3734 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
671.0 bits(1458) | 0.0 | 307/324(95%) | 0/324(0%) | Plus/Minus |
Query 3 SRCTGLSRHYCTRRKGSAR**TIGP*CFNLEMRLVSAVVCFHLLLYLRRLVSRNLCTLILDSPLTKYT*LSQRRIHKHHYKNTCLSFFLSGNYL*LISLLPTLKQXXXXXXXXXXXNFWLFLSTSYRLC**SKPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPLQIVQYPTPRAMVFIN*PPYLCFVVG*DIKKYISVSLPVS*ICF*VTGTLYLADLVDIFTHLRKDVVNPETRSYIVTYHLTFLIKNRGKQF 974 S+C LSRHYCTRRKGSA+**TIGP*CFN EMRLVSAVV FHLL+YLR+L SRNL T ILDSP TKYT*LSQRRIH HHY NTCLSFFLSGNYL*LISLLPTLKQRSRRRVLSLR*NFWLFLSTSYRLC**SKPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPLQI+QYPTPRAMVFIN*PPYLCFVVG*DIKKYISVSLPVS*ICF*VTGTLYLADLVDIFTHLRKD+VNPETRSYIVTYHLTFLIK+RGKQF Subject 2763 SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKYT*LSQRRIHNHHYNNTCLSFFLSGNYL*LISLLPTLKQRSRRRVLSLR*NFWLFLSTSYRLC**SKPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPLQIIQYPTPRAMVFIN*PPYLCFVVG*DIKKYISVSLPVS*ICF*VTGTLYLADLVDIFTHLRKDIVNPETRSYIVTYHLTFLIKDRGKQF 3734
Range 5: 1997 to 3022 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
663.6 bits(1442) | 0.0 | 325/342(95%) | 0/342(0%) | Plus/Minus |
Query 715 NIPHHALWSXXXXXXXXXXXXVKTSKNISVSACPSPKYVSR*PARCXXXXXXXXXHICEKML*TLKXXXXXXXXXXXXXXKTAENSL*GLSINAEFVEYSFITVNPVSVSRNDFTTQLSNMLS*CKS*AITFKLPVFTPGSRRTVIKTGLNSIFR*SNAF*DVIRLRTFTP*IS*FNRYSASHCVSLQHVRRVISVIQ*CEVEAVRSEPLRDAVLS*GSVRWLNFLLYK*RNGGVSKIPHKGSHSVGWRRVVFPS*YSFPYFRITQVDLLLT*FGLHPIPIFDAYILYSRVEYEKLYHGHYHVPHISWCLTPGFRKNESA*PCVYL*SFRNR*IPLVVDIRF 1740 NIPHHALWSLLTNHLTFALLLVKTSKNISVSACPSPKYVSR*PARCISLISLISLHICEK+L*TLKLDPTSLLIISPSLLKTAENSL*GLSINAEFVEYSFITVNPVSVSRNDFT QLSN+LS*CKS*AITFKLPVFTPGSRRTVIKTGLNSIFR*SNAF*DVIRLRTFTP*I *FNRYSASHCVSLQHVRRVISVIQ*CEVEAVRSEPLRDAVLS*GS+RWLNFLLYK* NGGVSKIPH+GSHSVGWRR+VFPS*YSFPYFRIT VD LLT*FGLHPIP+FDAYILYSRVEYEKLYHGHYH+PHISWCLTP FRKNESA* CVYL*SFR R IPL+VDIRF Subject 1997 NIPHHALWSLLTNHLTFALLLVKTSKNISVSACPSPKYVSR*PARCISLISLISLHICEKIL*TLKLDPTSLLIISPSLLKTAENSL*GLSINAEFVEYSFITVNPVSVSRNDFTAQLSNILS*CKS*AITFKLPVFTPGSRRTVIKTGLNSIFR*SNAF*DVIRLRTFTP*IG*FNRYSASHCVSLQHVRRVISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYSRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRF 3022
Range 6: 3173 to 3736 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
412.1 bits(893) | 0.0 | 179/188(95%) | 0/188(0%) | Minus/Plus |
Query 1 TNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKALITNTVCKMSIETARSFIGDLILVADSSVSALEEAKSIRDNFRLRKRRGKYFYSGVCGSDVAKVRYILSGENRGLGYTDSLKLACVGREGGGNILQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILI 564 TNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKALITNTVCKMSIETARSFIGDLILVADSSVSALEEAKSI+DNFRLRKRRGKY+YSG CGSDVAKV+YILSGENRGLG DSLKL CVGR+GGGN+LQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILI Subject 3173 TNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKALITNTVCKMSIETARSFIGDLILVADSSVSALEEAKSIKDNFRLRKRRGKYYYSGDCGSDVAKVKYILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILI 3736
Range 7: 3237 to 3728 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
321.8 bits(696) | 0.0 | 149/164(91%) | 0/164(0%) | Minus/Plus |
Query 9 SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL*SLTQSVRCR*KQPEVLSET*YSSPTPLFQRWKKRNQLEIISA*EKGEASIFIVVFVDPTLRKLGIFCQGRIED*GTQIP*N*PA*VEKEVETYYSTY*SHL*VKASWTYRLLSCRSFPPCTIMT*QPCT 500 SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL*SLTQSVRCR*KQPEVLSET*YSSPTPLFQRWKKRNQL+IISA*EKGEASI IVV VDPTLRKL IFC GRIED G IP*+* A*V+KEVETYYSTY*SHL VKASWTYRLL CRSFPPCTIMT*Q T Subject 3237 SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL*SLTQSVRCR*KQPEVLSET*YSSPTPLFQRWKKRNQLKIISA*EKGEASIIIVVIVDPTLRKLSIFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFT 3728
Range 8: 3083 to 3418 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
256.7 bits(554) | 0.0 | 112/112(100%) | 0/112(0%) | Plus/Minus |
Query 319 GVGDEY*VSDKTSGCFYRHLTDCVSDQSLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QP*DKIAERKQLHLNPG*SDDKT*V 654 GVGDEY*VSDKTSGCFYRHLTDCVSDQSLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QP*DKIAERKQLHLNPG*SDDKT*V Subject 3083 GVGDEY*VSDKTSGCFYRHLTDCVSDQSLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QP*DKIAERKQLHLNPG*SDDKT*V 3418
Range 9: 1996 to 2313 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.0 bits(489) | 0.0 | 103/106(97%) | 0/106(0%) | Plus/Minus |
Query 1424 KYLIKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIMFPISRGV*LPAFERTSLRSLAFICRASVIGKYRSS*ISAS 1741 KYL+KDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATI+FPISRGV*LP FERTSLRSLAFICRASVIGKYRSS*ISAS Subject 1996 KYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISAS 2313
Range 10: 2424 to 2723 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
203.6 bits(438) | 0.0 | 91/100(91%) | 0/100(0%) | Plus/Minus |
Query 1014 FHNGESSVSVSK*LYHTIVEYXXXXXXISYHFQTTSVYAGITANCN*NWSEFHL*IIKCFLRCYTSPNLYALN*LI*SL*RKPLR*PSTRPPGNICYPVV 1313 FHN ESSV VSK LY ++EY+VVV*VISYHFQTTSVYAGITANCN*NWSEFHL*IIKCFLRCYTSPNLYALN LI*SL*RKPLR*PSTRPPGNICYPVV Subject 2424 FHNSESSVGVSKRLYRAVIEYIVVV*VISYHFQTTSVYAGITANCN*NWSEFHL*IIKCFLRCYTSPNLYALNWLI*SL*RKPLR*PSTRPPGNICYPVV 2723
Range 11: 3499 to 3735 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
172.4 bits(370) | 0.0 | 71/79(90%) | 0/79(0%) | Plus/Minus |
Query 2 IKMYRAVTSLLYKAERICTIINDRSMML*PRDEISKCCSMFPPPSLPTQASFKESVYPNPRFSPDKIYLTFATSDPQTP 238 IKM AVTSLLYKAERICTIINDRSMML*PRDEISKCCS FPPP LPTQ SFKES +PNPRFSPDKIYLTFATSDPQ+P Subject 3499 IKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKIYLTFATSDPQSP 3735
Range 12: 2356 to 2952 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
395.1 bits(856) | 0.0 | 189/199(95%) | 0/199(0%) | Plus/Minus |
Query 785 HQKIYQCQPARLLNMFLGNRHVVSR*SR*YLYTFAKRCCKP*NSILHRYLSSHLPY*KPRKTVYKDLV*TLNSSNTLS*R*IQCQCLEMTLPHNCRICCRSVSHKLSLSNYQCLRRDHGEL*LKLV*IPSLDNQMLSKMLYVSEPLRLKXXXXXXXXXXXXXXFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG 1381 HQKIYQCQPARLLNMFLGNRHVVSR*SR*YLYTFAKR CKP*NSILHRYLSSHLPY*+PRKTVYKDLV*TLNSSN LS*+*IQC+CLE TLP + RI CRSVSHKLSLSNYQCLRRDHGEL*LKLV*IPSLDNQMLSKMLYVSEPLRLKLADLIAIAQAIALAFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG Subject 2356 HQKIYQCQPARLLNMFLGNRHVVSR*SR*YLYTFAKRYCKP*NSILHRYLSSHLPY*RPRKTVYKDLV*TLNSSNILS*Q*IQCRCLETTLPRSYRIYCRSVSHKLSLSNYQCLRRDHGEL*LKLV*IPSLDNQMLSKMLYVSEPLRLKLADLIAIAQAIALAFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG 2952
Range 13: 3455 to 3736 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
160.1 bits(343) | 0.0 | 78/94(83%) | 0/94(0%) | Plus/Minus |
Query 1 DQDVQGCHVIIVQGGKDLHDNKR*VHDALT*R*D**VL*YVSTSFSTYAG*FQGICVP*SSILP*QNIPNFRNVGSTNTTIKILASPFS*AEII 282 +Q+V+ CHVIIVQGGKDLH+NKR*VHDALT R*D**VL*YVSTS STYA * QGI P SSILP QNI NFRNVGST TTI ILASPFS*AEII Subject 3455 NQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNILNFRNVGSTITTIIILASPFS*AEII 3736
Range 14: 1995 to 2213 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
153.2 bits(328) | 0.0 | 67/73(92%) | 0/73(0%) | Plus/Minus |
Query 1524 FDLIRSPPYTHL*RLYSLQ*SRVRKVVSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH 1742 FDLIRSPPYT L*RLYSLQ*SRVRKVVSWPLS SPYLVVFDSRLSKERVCV LRLSVELP S NTA RRYPLH Subject 1995 FDLIRSPPYTRL*RLYSLQ*SRVRKVVSWPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH 2213
Range 15: 3226 to 3450 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
133.9 bits(286) | 0.0 | 75/75(100%) | 0/75(0%) | Plus/Minus |
Query 287 IDFXXXXXXXXXXXXXIKSPIKLLAVSIDILQTVLVIKAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL 511 IDFASSNAETEESATSIKSPIKLLAVSIDILQTVLVIKAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL Subject 3226 IDFASSNAETEESATSIKSPIKLLAVSIDILQTVLVIKAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL 3450
Range 16: 3013 to 3174 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.4 bits(263) | 0.0 | 53/54(98%) | 0/54(0%) | Plus/Minus |
Query 563 VLSDFDNLKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSNRSISH 724 VLSDFDNLKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSN SISH Subject 3013 VLSDFDNLKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSNHSISH 3174
Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome
Sequence ID: KX756669.1 Length: 18313 Number of Matches: 17
Range 1: 15542 to 17281 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1173.6 bits(2555) | 0.0 | 541/580(93%) | 0/580(0%) | Minus/Plus |
Query 2 *SGYLRRAVFTDYGSSTDKRKATQTRSFESRESNTTRYGEHDSGHDTTFRTLLYCKEYKRQRWV*GGDRIRSKEGLLELFGSKGSYIRREIRRVSNQHCAILYEVFYSHHHYATYREENSASVHCPS*ARRPEEVHSVLLRLRTTG*QILPGGRVEG*RNGLRYSD*IS*FKA*RFGDV*HLRKHLII*RWNSDQF*LQFAVIPA*TLVV*K**LMXXXXXXXXTIVW*SHFETLTLDSPL*KSIRRIQRLY*VLINCFPRFLIRKVR**VTM*DRVSGFTTSFRKCVKISTRSARYNVPVT*KHI*ETGRLTLIYFLMS*PTTKQR*GG*LIKTIARGVGY*TI*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGFDH*HSL*DVDRNSQKFYRRLNTRRRLLCFSVGRSEIN*R*FPLKKKERQVFL*WCLWIRRCES*VYFVRGESRIRVHRFLETSLRR*RRRWKHTTALTNLISRLKHHGPIVYYRADPFRLVQ**RDSPVHLD 1741 *SGYLR AVF D GSSTDKRK TQTRSFE RESNTTRYGE+DSGHDTTFRTLLY KEYKRQR V*GGDRIRSKE LL+LFGSKGSYIRREIR VSNQHCAIL+EVFYSHHHY+TYREENSASV+CPS*ARRPEEVHSVLLRLRTTG*QILPGGRVEG*RNGLRYSD*IS*FKA*RFGDV*HLRKHLII*RWNSDQF*LQFAVIPA*TLVV*K**LMTYTTT YS *S FET TLDS L*K+IRRIQRLY*VLINCFPR LIRKVR**VTM*DRVSGFT SFRKCVKISTRSARYNVPVT*KHI*ETGRLTLIYFLMS*PTTKQR*GG*LIKTIARGVGY* I*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGFDH*HSL*DVDRNSQKFYRRLNTRRRLLCFSVGRSEIN*R*FPLKKKERQV L*W LWIRRCES*VYFV GESRI V RFLE SLRR* RRWK TTALTNLIS LKHHGPIVYY ADPFRLVQ**RDS +H D Subject 15542 *SGYLR*AVFADNGSSTDKRKTTQTRSFERRESNTTRYGEYDSGHDTTFRTLLYRKEYKRQRRV*GGDRIRSKESLLKLFGSKGSYIRREIRCVSNQHCAILHEVFYSHHHYSTYREENSASVYCPS*ARRPEEVHSVLLRLRTTG*QILPGGRVEG*RNGLRYSD*IS*FKA*RFGDV*HLRKHLII*RWNSDQF*LQFAVIPA*TLVV*K**LMTYTTTIYSITAR*SRFETPTLDSLL*KNIRRIQRLY*VLINCFPRSLIRKVR**VTM*DRVSGFTISFRKCVKISTRSARYNVPVT*KHI*ETGRLTLIYFLMS*PTTKQR*GG*LIKTIARGVGY*MI*SGKRATRRNLRGETY*ILTFYRLIIQGLNEVAFAPLSYLKVVKVA*NERSLGFNTYKGGAYKLLQRLFHR*GCRIKRLSRKYREFSRSQVRFAKFLPSHEGFDH*HSL*DVDRNSQKFYRRLNTRRRLLCFSVGRSEIN*R*FPLKKKERQVLL*W*LWIRRCES*VYFVWGESRIGVRRFLEASLRR*TRRWKRTTALTNLISGLKHHGPIVYYCADPFRLVQ**RDSTLHFD 17281
Range 2: 15541 to 16743 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
865.7 bits(1883) | 0.0 | 387/401(97%) | 0/401(0%) | Minus/Plus |
Query 540 MKRISTTSGIYRLRKLYR*TQGYADSFFRKPGVKHHEIWGT**WP*YNFSYSTLL*RI*ASKMGIGWRPN*VKRRST*VIRK*GKLY*EGNTTRLQPTLCDPL*GIXXXXXXXXXXXRKFSQRTLP*LSTASRRGSLRTASTSHYWITDITRRTC*RLTQWLAL*RLNQLI*GVKVRRRITS*KAFDYLKMEFRPVLITVRRDPGVNTGSLKVIAYDLHYDNIFDNCVVKSFRDTDTGFTVMKEYSTNSAFILSPYKLFSAVFNKEGEMISNDVGSSFRVYNIFSQMCKDINEISEIQRAGYLETYLGDGQADTDIFFDVLTNNKAKVRWLVNKDHSAWCGILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*GCQSRLERTITWF*Y 1742 MKRIST SGI R RKLYR*TQ YADSFFRK GVKHHEIWG **WP*YNFSYSTL *RI*ASK GIGWRPN*VKR+ST*VIRK*GKLY*EGNT RLQPTLCDP *GILLTPPL YL*RRKFSQR LP*LSTASRRGSLRTASTSHYWITDITRRTC*RLTQWLAL*RLNQLI*GVKVRRRITS*KAFDYLKMEFRPVLITVRRDPGVNTGSLKVIAYDLHYDNIFDNC VKSFRDTDTGFTVMKEYSTNSAFILSPYKLFSAVFNKEGEMISNDVGSSFRVYNIFSQMCKDINEISEIQRAGYLETYLGDGQADTDIFFDVLTNNKAKVRWLVNKDHSAWCGILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*GCQSRLERTITWF*Y Subject 15541 MKRISTMSGICR*RKLYR*TQDYADSFFRKAGVKHHEIWGI**WP*YNFSYSTLP*RI*ASKTGIGWRPN*VKRKST*VIRK*GKLY*EGNTMRLQPTLCDPS*GILLTPPLLYL*RRKFSQRILP*LSTASRRGSLRTASTSHYWITDITRRTC*RLTQWLAL*RLNQLI*GVKVRRRITS*KAFDYLKMEFRPVLITVRRDPGVNTGSLKVIAYDLHYDNIFDNCAVKSFRDTDTGFTVMKEYSTNSAFILSPYKLFSAVFNKEGEMISNDVGSSFRVYNIFSQMCKDINEISEIQRAGYLETYLGDGQADTDIFFDVLTNNKAKVRWLVNKDHSAWCGILNDLKWEESNKEKFKGRDILDTYVLSSDYPGFK*SCFRSAILS*GCQSRLERTITWF*Y 16743
Range 3: 15543 to 16670 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
830.4 bits(1806) | 0.0 | 365/376(97%) | 0/376(0%) | Minus/Plus |
Query 613 EADIYDERYLPITEALQINARLRRLVLSKAGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAMACAIAIKSANLRRKGSETYNILESI*LSKDGIQTSFNYSSP*SRRKHW*FESDSL*LTLRQHIRQLCGKVISRH*HWIHRYERVFDEFSVYTKSL*TVFRGF**GR*DDK*RCRIEFQGLQHLFANV*RYQRDQRDTTCRLPRNIFRRRAG*H*YIF*CLNQQQSKGKVVS**RP*RVVWDIERFEVGREQQGEI*GERHTRYLRFIV*LSRV*MK 1740 EADIYDERYLPITEALQINARLRRLVLSK GSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAMACAIAIKSANLRRKGSETYNILESI*LSKDGIQTSFNYSSP*SRRKHW*FESDSL*LTLRQ+IR L GKV+SRH HWIH YER+FDEFSVYTKSL*TVFRG **GR*DDK*RCRIEFQGLQ+LFANV*RYQRDQRDTTCRLPRNIFRRRAG*H*YIF*CLNQQQSKGKVVS**RP*RVVWDIE FEVGREQQGEI*GERHTRYLRFIV*LSRV*MK Subject 15543 EADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMIQLFVLYSTVKNISVKDGYRVETELGQKKVYLSYSEVREAILGGKYDASPTNTVRSFMRYFTHTTITLLIEKKIQPAYTALAKHGVPKRFTPYCFDFALLDNRYYPADVLKANAMACAIAIKSANLRRKGSETYNILESI*LSKDGIQTSFNYSSP*SRRKHW*FESDSL*LTLRQYIR*LRGKVVSRHRHWIHCYERIFDEFSVYTKSL*TVFRGL**GR*DDK*RCRIEFQGLQYLFANV*RYQRDQRDTTCRLPRNIFRRRAG*H*YIF*CLNQQQSKGKVVS**RP*RVVWDIE*FEVGREQQGEI*GERHTRYLRFIV*LSRV*MK 16670
Range 4: 16309 to 17280 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
671.0 bits(1458) | 0.0 | 307/324(95%) | 0/324(0%) | Plus/Minus |
Query 3 SRCTGLSRHYCTRRKGSAR**TIGP*CFNLEMRLVSAVVCFHLLLYLRRLVSRNLCTLILDSPLTKYT*LSQRRIHKHHYKNTCLSFFLSGNYL*LISLLPTLKQXXXXXXXXXXXNFWLFLSTSYRLC**SKPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPLQIVQYPTPRAMVFIN*PPYLCFVVG*DIKKYISVSLPVS*ICF*VTGTLYLADLVDIFTHLRKDVVNPETRSYIVTYHLTFLIKNRGKQF 974 S+C LSRHYCTRRKGSA+**TIGP*CFN EMRLVSAVV FHLL+YLR+L SRNL T ILDSP TKYT*LSQRRIH HHY NTCLSFFLSGNYL*LISLLPTLKQRSRRRVLSLR*NFWLFLSTSYRLC**SKPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPLQI+QYPTPRAMVFIN*PPYLCFVVG*DIKKYISVSLPVS*ICF*VTGTLYLADLVDIFTHLRKD+VNPETRSYIVTYHLTFLIK+RGKQF Subject 16309 SKCKVLSRHYCTRRKGSAQ**TIGP*CFNPEMRLVSAVVRFHLLVYLRKLASRNLRTPILDSPQTKYT*LSQRRIHNHHYNNTCLSFFLSGNYL*LISLLPTLKQRSRRRVLSLR*NFWLFLSTSYRLC**SKPS*LGRNFANRTWLRENSLYFRESLLIRHPHR*KRRCNSL*APPL*VLKPSDRSF*ATLTTLR*DSGAKATSFKPWIIRR*NVSI*YVSPLKFLLVALFPLQIIQYPTPRAMVFIN*PPYLCFVVG*DIKKYISVSLPVS*ICF*VTGTLYLADLVDIFTHLRKDIVNPETRSYIVTYHLTFLIKDRGKQF 17280
Range 5: 15543 to 16568 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
663.6 bits(1442) | 0.0 | 325/342(95%) | 0/342(0%) | Plus/Minus |
Query 715 NIPHHALWSXXXXXXXXXXXXVKTSKNISVSACPSPKYVSR*PARCXXXXXXXXXHICEKML*TLKXXXXXXXXXXXXXXKTAENSL*GLSINAEFVEYSFITVNPVSVSRNDFTTQLSNMLS*CKS*AITFKLPVFTPGSRRTVIKTGLNSIFR*SNAF*DVIRLRTFTP*IS*FNRYSASHCVSLQHVRRVISVIQ*CEVEAVRSEPLRDAVLS*GSVRWLNFLLYK*RNGGVSKIPHKGSHSVGWRRVVFPS*YSFPYFRITQVDLLLT*FGLHPIPIFDAYILYSRVEYEKLYHGHYHVPHISWCLTPGFRKNESA*PCVYL*SFRNR*IPLVVDIRF 1740 NIPHHALWSLLTNHLTFALLLVKTSKNISVSACPSPKYVSR*PARCISLISLISLHICEK+L*TLKLDPTSLLIISPSLLKTAENSL*GLSINAEFVEYSFITVNPVSVSRNDFT QLSN+LS*CKS*AITFKLPVFTPGSRRTVIKTGLNSIFR*SNAF*DVIRLRTFTP*IS*FNRYSASHCVSLQHVRRVISVIQ*CEVEAVRSEPLRDAVLS*GS+RWLNFLLYK* NGGVSKIPH+GSHSVGWRR+VFPS*YSFPYFRIT VD LLT*FGLHPIP+FDAYILY RVEYEKLYHGHYH+PHISWCLTP FRKNESA* CVYL*SFR R IPL+VDIRF Subject 15543 NIPHHALWSLLTNHLTFALLLVKTSKNISVSACPSPKYVSR*PARCISLISLISLHICEKIL*TLKLDPTSLLIISPSLLKTAENSL*GLSINAEFVEYSFITVNPVSVSRNDFTAQLSNILS*CKS*AITFKLPVFTPGSRRTVIKTGLNSIFR*SNAF*DVIRLRTFTP*IS*FNRYSASHCVSLQHVRRVISVIQ*CEVEAVRSEPLRDAVLS*GSIRWLNFLLYK*SNGGVSKIPHEGSHSVGWRRIVFPS*YSFPYFRIT*VDFLLT*FGLHPIPVFDAYILYGRVEYEKLYHGHYHIPHISWCLTPAFRKNESA*SCVYL*SFRYRQIPLIVDIRF 16568
Range 6: 16719 to 17282 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
412.1 bits(893) | 0.0 | 179/188(95%) | 0/188(0%) | Minus/Plus |
Query 1 TNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKALITNTVCKMSIETARSFIGDLILVADSSVSALEEAKSIRDNFRLRKRRGKYFYSGVCGSDVAKVRYILSGENRGLGYTDSLKLACVGREGGGNILQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILI 564 TNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKALITNTVCKMSIETARSFIGDLILVADSSVSALEEAKSI+DNFRLRKRRGKY+YSG CGSDVAKV+YILSGENRGLG DSLKL CVGR+GGGN+LQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILI Subject 16719 TNDHLVLILIKEALINYYNASFTDEGAVLRDSRESIENFLVARCGSQNSCRVMKALITNTVCKMSIETARSFIGDLILVADSSVSALEEAKSIKDNFRLRKRRGKYYYSGDCGSDVAKVKYILSGENRGLGCVDSLKLVCVGRQGGGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDVTALYILI 17282
Range 7: 16783 to 17274 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
321.8 bits(696) | 0.0 | 149/164(91%) | 0/164(0%) | Minus/Plus |
Query 9 SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL*SLTQSVRCR*KQPEVLSET*YSSPTPLFQRWKKRNQLEIISA*EKGEASIFIVVFVDPTLRKLGIFCQGRIED*GTQIP*N*PA*VEKEVETYYSTY*SHL*VKASWTYRLLSCRSFPPCTIMT*QPCT 500 SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL*SLTQSVRCR*KQPEVLSET*YSSPTPLFQRWKKRNQL+IISA*EKGEASI IVV VDPTLRKL IFC GRIED G IP*+* A*V+KEVETYYSTY*SHL VKASWTYRLL CRSFPPCTIMT*Q T Subject 16783 SPMRVPY*ETLAKV*RIFS*PGAVRKIPAES*RL*SLTQSVRCR*KQPEVLSET*YSSPTPLFQRWKKRNQLKIISA*EKGEASIIIVVIVDPTLRKLSIFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY*SHLWVKASWTYRLLLCRSFPPCTIMT*QHFT 17274
Range 8: 16629 to 16964 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
256.7 bits(554) | 0.0 | 112/112(100%) | 0/112(0%) | Plus/Minus |
Query 319 GVGDEY*VSDKTSGCFYRHLTDCVSDQSLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QP*DKIAERKQLHLNPG*SDDKT*V 654 GVGDEY*VSDKTSGCFYRHLTDCVSDQSLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QP*DKIAERKQLHLNPG*SDDKT*V Subject 16629 GVGDEY*VSDKTSGCFYRHLTDCVSDQSLHDSAGILRTAPGYEKILYTFARVS*YGTLIGERGVVIVYKRLLYKY*NQVIVRSKRL*QP*DKIAERKQLHLNPG*SDDKT*V 16964
Range 9: 15542 to 15859 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.0 bits(489) | 0.0 | 103/106(97%) | 0/106(0%) | Plus/Minus |
Query 1424 KYLIKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIMFPISRGV*LPAFERTSLRSLAFICRASVIGKYRSS*ISAS 1741 KYL+KDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATI+FPISRGV*LP FERTSLRSLAFICRASVIGKYRSS*ISAS Subject 15542 KYLMKDRTVLVGDASYFPPNIASLTSE*LK*TFF*PNSVSTLYPSLTLIFFTVE*STKSCIMATIIFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISAS 15859
Range 10: 15970 to 16269 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
205.9 bits(443) | 0.0 | 92/100(92%) | 0/100(0%) | Plus/Minus |
Query 1014 FHNGESSVSVSK*LYHTIVEYXXXXXXISYHFQTTSVYAGITANCN*NWSEFHL*IIKCFLRCYTSPNLYALN*LI*SL*RKPLR*PSTRPPGNICYPVV 1313 FHN ESSV VSK LY ++EY+VVV*VISYHFQTTSVYAGITANCN*NWSEFHL*IIKCFLRCYTSPNLYALN*LI*SL*RKPLR*PSTRPPGNICYPVV Subject 15970 FHNSESSVGVSKRLYRAVIEYIVVV*VISYHFQTTSVYAGITANCN*NWSEFHL*IIKCFLRCYTSPNLYALN*LI*SL*RKPLR*PSTRPPGNICYPVV 16269
Range 11: 17045 to 17281 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
172.4 bits(370) | 0.0 | 71/79(90%) | 0/79(0%) | Plus/Minus |
Query 2 IKMYRAVTSLLYKAERICTIINDRSMML*PRDEISKCCSMFPPPSLPTQASFKESVYPNPRFSPDKIYLTFATSDPQTP 238 IKM AVTSLLYKAERICTIINDRSMML*PRDEISKCCS FPPP LPTQ SFKES +PNPRFSPDKIYLTFATSDPQ+P Subject 17045 IKM*SAVTSLLYKAERICTIINDRSMML*PRDEISKCCSTFPPPCLPTQTSFKESTHPNPRFSPDKIYLTFATSDPQSP 17281
Range 12: 15902 to 16498 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
395.1 bits(856) | 0.0 | 189/199(95%) | 0/199(0%) | Plus/Minus |
Query 785 HQKIYQCQPARLLNMFLGNRHVVSR*SR*YLYTFAKRCCKP*NSILHRYLSSHLPY*KPRKTVYKDLV*TLNSSNTLS*R*IQCQCLEMTLPHNCRICCRSVSHKLSLSNYQCLRRDHGEL*LKLV*IPSLDNQMLSKMLYVSEPLRLKXXXXXXXXXXXXXXFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG 1381 HQKIYQCQPARLLNMFLGNRHVVSR*SR*YLYTFAKR CKP*NSILHRYLSSHLPY*+PRKTVYKDLV*TLNSSN LS*+*IQC+CLE TLP + RI CRSVSHKLSLSNYQCLRRDHGEL*LKLV*IPSLDNQMLSKMLYVSEPLRLKLADLIAIAQAIALAFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG Subject 15902 HQKIYQCQPARLLNMFLGNRHVVSR*SR*YLYTFAKRYCKP*NSILHRYLSSHLPY*RPRKTVYKDLV*TLNSSNILS*Q*IQCRCLETTLPRSYRIYCRSVSHKLSLSNYQCLRRDHGEL*LKLV*IPSLDNQMLSKMLYVSEPLRLKLADLIAIAQAIALAFNTSAG*YLLSSSAKSKQYGVNLFGTPCLARAVYAG 16498
Range 13: 17001 to 17282 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
160.1 bits(343) | 0.0 | 78/94(83%) | 0/94(0%) | Plus/Minus |
Query 1 DQDVQGCHVIIVQGGKDLHDNKR*VHDALT*R*D**VL*YVSTSFSTYAG*FQGICVP*SSILP*QNIPNFRNVGSTNTTIKILASPFS*AEII 282 +Q+V+ CHVIIVQGGKDLH+NKR*VHDALT R*D**VL*YVSTS STYA * QGI P SSILP QNI NFRNVGST TTI ILASPFS*AEII Subject 17001 NQNVKCCHVIIVQGGKDLHNNKR*VHDALTQR*D**VL*YVSTSLSTYAN*LQGIYAPQSSILPRQNILNFRNVGSTITTIIILASPFS*AEII 17282
Range 14: 15541 to 15759 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
151.4 bits(324) | 0.0 | 66/73(90%) | 0/73(0%) | Plus/Minus |
Query 1524 FDLIRSPPYTHL*RLYSLQ*SRVRKVVSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH 1742 FDLIRSPPYT L*RLYSL+*SRVRKVVSWPLS SPYLVVFDSRLSKERVCV LRLSVELP S NTA RRYPLH Subject 15541 FDLIRSPPYTRL*RLYSLR*SRVRKVVSWPLSYSPYLVVFDSRLSKERVCVVLRLSVELPLSANTAHRRYPLH 15759
Range 15: 16772 to 16996 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
133.9 bits(286) | 0.0 | 75/75(100%) | 0/75(0%) | Plus/Minus |
Query 287 IDFXXXXXXXXXXXXXIKSPIKLLAVSIDILQTVLVIKAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL 511 IDFASSNAETEESATSIKSPIKLLAVSIDILQTVLVIKAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL Subject 16772 IDFASSNAETEESATSIKSPIKLLAVSIDILQTVLVIKAFMTRQEFCEPHLATRKFSILSRESLNTAPSSVKEAL 16996
Range 16: 16559 to 16720 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.4 bits(263) | 0.0 | 53/54(98%) | 0/54(0%) | Plus/Minus |
Query 563 VLSDFDNLKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSNRSISH 724 VLSDFDNLKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSN SISH Subject 16559 VLSDFDNLKIR*RSESNFI*TLDNQTIKRKYLVCLSP*ISPCCSLPTSNHSISH 16720
Nucleotide Sequence (313 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
254.0 | 1345.1 | 48% | 4.541e-66 | 99% | HQ130283.1 | |
254.0 | 1345.1 | 48% | 4.541e-66 | 99% | HQ130284.1 | |
254.0 | 1345.1 | 48% | 4.541e-66 | 99% | HQ130285.1 | |
254.0 | 1345.1 | 48% | 4.541e-66 | 99% | HQ130286.1 | |
254.0 | 1345.1 | 48% | 4.541e-66 | 99% | HQ130287.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 3 3 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130283.1 Length: 4711 Number of Matches: 6
Range 1: 1826 to 2134 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
254.0 bits(548) | 0.0 | 102/103(99%) | 0/103(0%) | Minus/Minus |
Query 3 YHGHYHVPHISWCLTPAFRKNESA*PCVYL*SFRNR*IPLVVDIRFIDRQH*VGKTYLALPPGVDQFRYVRR*SHYV*LL*WTYTFRRRWCYWTWR*QRRIVD 311 YHGHYHVPHISWCLTPAFRKNESA*PCVYL*SFRNR*IPLVVDIRFIDR H*VGKTYLALPPGVDQFRYVRR*SHYV*LL*WTYTFRRRWCYWTWR*QRRIVD Subject 1826 YHGHYHVPHISWCLTPAFRKNESA*PCVYL*SFRNR*IPLVVDIRFIDR*H*VGKTYLALPPGVDQFRYVRR*SHYV*LL*WTYTFRRRWCYWTWR*QRRIVD 2134
Range 2: 1825 to 2136 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
246.7 bits(532) | 0.0 | 103/104(99%) | 0/104(0%) | Plus/Plus |
Query 2 HRRCDVVSAKSSSTSAYGRCRSIRATRRSGFNV*RNGIDQHQGAGQDKFSRLSVVDQ*SGYLRRAVFTDYGSSTDKRKATQTRSFERRESNTTRYGEHDSGHDT 313 HRRCDVVSAKSSSTSAYGRCRSIRATRRSGFNV*RNGIDQHQGAGQDKFSRLSV+DQ*SGYLRRAVFTDYGSSTDKRKATQTRSFERRESNTTRYGEHDSGHDT Subject 1825 HRRCDVVSAKSSSTSAYGRCRSIRATRRSGFNV*RNGIDQHQGAGQDKFSRLSVIDQ*SGYLRRAVFTDYGSSTDKRKATQTRSFERRESNTTRYGEHDSGHDT 2136
Range 3: 1825 to 2136 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
237.0 bits(511) | 0.0 | 104/104(100%) | 0/104(0%) | Minus/Minus |
Query 2 CIMATIMFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKLILPCPLVLINSVTSDVKATTSSCSDGPTPSVGAGATGLGANNVASSM 313 CIMATIMFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKLILPCPLVLINSVTSDVKATTSSCSDGPTPSVGAGATGLGANNVASSM Subject 1825 CIMATIMFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKLILPCPLVLINSVTSDVKATTSSCSDGPTPSVGAGATGLGANNVASSM 2136
Range 4: 1826 to 2134 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
234.2 bits(510) | 0.0 | 103/103(100%) | 0/103(0%) | Plus/Plus |
Query 3 IDDATLLAPSPVAPAPTEGVGPSEQLDVVALTSDVTELINTRGQGKISFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMI 311 IDDATLLAPSPVAPAPTEGVGPSEQLDVVALTSDVTELINTRGQGKISFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMI Subject 1826 IDDATLLAPSPVAPAPTEGVGPSEQLDVVALTSDVTELINTRGQGKISFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMI 2134
Range 5: 1890 to 2135 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
187.1 bits(402) | 0.0 | 81/82(99%) | 0/82(0%) | Plus/Plus |
Query 67 HQSN*T*WL*RLT*RN*STPGGRAR*VFPTQCCRSMKRISTTSGIYRLRKLYR*TQGYADSFFRKAGVKHHEIWGT**WP*Y 312 HQSN*T*WL*RLT*RN*STPGGRAR*VFPTQC RSMKRISTTSGIYRLRKLYR*TQGYADSFFRKAGVKHHEIWGT**WP*Y Subject 1890 HQSN*T*WL*RLT*RN*STPGGRAR*VFPTQCYRSMKRISTTSGIYRLRKLYR*TQGYADSFFRKAGVKHHEIWGT**WP*Y 2135
Range 6: 1896 to 2135 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
186.2 bits(400) | 0.0 | 79/80(99%) | 0/80(0%) | Minus/Minus |
Query 73 VSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH*STTLSRENLSCPAPWC*SIPLRQTLKPLRLVA 312 VSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH*S TLSRENLSCPAPWC*SIPLRQTLKPLRLVA Subject 1896 VSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH*SITLSRENLSCPAPWC*SIPLRQTLKPLRLVA 2135
Grapevine leafroll associated virus 3 isolate 3 5 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130284.1 Length: 4711 Number of Matches: 6
Range 1: 1826 to 2134 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
254.0 bits(548) | 0.0 | 102/103(99%) | 0/103(0%) | Minus/Minus |
Query 3 YHGHYHVPHISWCLTPAFRKNESA*PCVYL*SFRNR*IPLVVDIRFIDRQH*VGKTYLALPPGVDQFRYVRR*SHYV*LL*WTYTFRRRWCYWTWR*QRRIVD 311 YHGHYHVPHISWCLTPAFRKNESA*PCVYL*SFRNR*IPLVVDIRFIDR H*VGKTYLALPPGVDQFRYVRR*SHYV*LL*WTYTFRRRWCYWTWR*QRRIVD Subject 1826 YHGHYHVPHISWCLTPAFRKNESA*PCVYL*SFRNR*IPLVVDIRFIDR*H*VGKTYLALPPGVDQFRYVRR*SHYV*LL*WTYTFRRRWCYWTWR*QRRIVD 2134
Range 2: 1825 to 2136 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
246.7 bits(532) | 0.0 | 103/104(99%) | 0/104(0%) | Plus/Plus |
Query 2 HRRCDVVSAKSSSTSAYGRCRSIRATRRSGFNV*RNGIDQHQGAGQDKFSRLSVVDQ*SGYLRRAVFTDYGSSTDKRKATQTRSFERRESNTTRYGEHDSGHDT 313 HRRCDVVSAKSSSTSAYGRCRSIRATRRSGFNV*RNGIDQHQGAGQDKFSRLSV+DQ*SGYLRRAVFTDYGSSTDKRKATQTRSFERRESNTTRYGEHDSGHDT Subject 1825 HRRCDVVSAKSSSTSAYGRCRSIRATRRSGFNV*RNGIDQHQGAGQDKFSRLSVIDQ*SGYLRRAVFTDYGSSTDKRKATQTRSFERRESNTTRYGEHDSGHDT 2136
Range 3: 1825 to 2136 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
237.0 bits(511) | 0.0 | 104/104(100%) | 0/104(0%) | Minus/Minus |
Query 2 CIMATIMFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKLILPCPLVLINSVTSDVKATTSSCSDGPTPSVGAGATGLGANNVASSM 313 CIMATIMFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKLILPCPLVLINSVTSDVKATTSSCSDGPTPSVGAGATGLGANNVASSM Subject 1825 CIMATIMFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKLILPCPLVLINSVTSDVKATTSSCSDGPTPSVGAGATGLGANNVASSM 2136
Range 4: 1826 to 2134 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
234.2 bits(510) | 0.0 | 103/103(100%) | 0/103(0%) | Plus/Plus |
Query 3 IDDATLLAPSPVAPAPTEGVGPSEQLDVVALTSDVTELINTRGQGKISFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMI 311 IDDATLLAPSPVAPAPTEGVGPSEQLDVVALTSDVTELINTRGQGKISFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMI Subject 1826 IDDATLLAPSPVAPAPTEGVGPSEQLDVVALTSDVTELINTRGQGKISFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMI 2134
Range 5: 1890 to 2135 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
187.1 bits(402) | 0.0 | 81/82(99%) | 0/82(0%) | Plus/Plus |
Query 67 HQSN*T*WL*RLT*RN*STPGGRAR*VFPTQCCRSMKRISTTSGIYRLRKLYR*TQGYADSFFRKAGVKHHEIWGT**WP*Y 312 HQSN*T*WL*RLT*RN*STPGGRAR*VFPTQC RSMKRISTTSGIYRLRKLYR*TQGYADSFFRKAGVKHHEIWGT**WP*Y Subject 1890 HQSN*T*WL*RLT*RN*STPGGRAR*VFPTQCYRSMKRISTTSGIYRLRKLYR*TQGYADSFFRKAGVKHHEIWGT**WP*Y 2135
Range 6: 1896 to 2135 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
186.2 bits(400) | 0.0 | 79/80(99%) | 0/80(0%) | Minus/Minus |
Query 73 VSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH*STTLSRENLSCPAPWC*SIPLRQTLKPLRLVA 312 VSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH*S TLSRENLSCPAPWC*SIPLRQTLKPLRLVA Subject 1896 VSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH*SITLSRENLSCPAPWC*SIPLRQTLKPLRLVA 2135
Grapevine leafroll associated virus 3 isolate 3 7 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130285.1 Length: 4711 Number of Matches: 6
Range 1: 1826 to 2134 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
254.0 bits(548) | 0.0 | 102/103(99%) | 0/103(0%) | Minus/Minus |
Query 3 YHGHYHVPHISWCLTPAFRKNESA*PCVYL*SFRNR*IPLVVDIRFIDRQH*VGKTYLALPPGVDQFRYVRR*SHYV*LL*WTYTFRRRWCYWTWR*QRRIVD 311 YHGHYHVPHISWCLTPAFRKNESA*PCVYL*SFRNR*IPLVVDIRFIDR H*VGKTYLALPPGVDQFRYVRR*SHYV*LL*WTYTFRRRWCYWTWR*QRRIVD Subject 1826 YHGHYHVPHISWCLTPAFRKNESA*PCVYL*SFRNR*IPLVVDIRFIDR*H*VGKTYLALPPGVDQFRYVRR*SHYV*LL*WTYTFRRRWCYWTWR*QRRIVD 2134
Range 2: 1825 to 2136 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
246.7 bits(532) | 0.0 | 103/104(99%) | 0/104(0%) | Plus/Plus |
Query 2 HRRCDVVSAKSSSTSAYGRCRSIRATRRSGFNV*RNGIDQHQGAGQDKFSRLSVVDQ*SGYLRRAVFTDYGSSTDKRKATQTRSFERRESNTTRYGEHDSGHDT 313 HRRCDVVSAKSSSTSAYGRCRSIRATRRSGFNV*RNGIDQHQGAGQDKFSRLSV+DQ*SGYLRRAVFTDYGSSTDKRKATQTRSFERRESNTTRYGEHDSGHDT Subject 1825 HRRCDVVSAKSSSTSAYGRCRSIRATRRSGFNV*RNGIDQHQGAGQDKFSRLSVIDQ*SGYLRRAVFTDYGSSTDKRKATQTRSFERRESNTTRYGEHDSGHDT 2136
Range 3: 1825 to 2136 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
237.0 bits(511) | 0.0 | 104/104(100%) | 0/104(0%) | Minus/Minus |
Query 2 CIMATIMFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKLILPCPLVLINSVTSDVKATTSSCSDGPTPSVGAGATGLGANNVASSM 313 CIMATIMFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKLILPCPLVLINSVTSDVKATTSSCSDGPTPSVGAGATGLGANNVASSM Subject 1825 CIMATIMFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKLILPCPLVLINSVTSDVKATTSSCSDGPTPSVGAGATGLGANNVASSM 2136
Range 4: 1826 to 2134 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
234.2 bits(510) | 0.0 | 103/103(100%) | 0/103(0%) | Plus/Plus |
Query 3 IDDATLLAPSPVAPAPTEGVGPSEQLDVVALTSDVTELINTRGQGKISFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMI 311 IDDATLLAPSPVAPAPTEGVGPSEQLDVVALTSDVTELINTRGQGKISFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMI Subject 1826 IDDATLLAPSPVAPAPTEGVGPSEQLDVVALTSDVTELINTRGQGKISFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMI 2134
Range 5: 1890 to 2135 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
187.1 bits(402) | 0.0 | 81/82(99%) | 0/82(0%) | Plus/Plus |
Query 67 HQSN*T*WL*RLT*RN*STPGGRAR*VFPTQCCRSMKRISTTSGIYRLRKLYR*TQGYADSFFRKAGVKHHEIWGT**WP*Y 312 HQSN*T*WL*RLT*RN*STPGGRAR*VFPTQC RSMKRISTTSGIYRLRKLYR*TQGYADSFFRKAGVKHHEIWGT**WP*Y Subject 1890 HQSN*T*WL*RLT*RN*STPGGRAR*VFPTQCYRSMKRISTTSGIYRLRKLYR*TQGYADSFFRKAGVKHHEIWGT**WP*Y 2135
Range 6: 1896 to 2135 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
186.2 bits(400) | 0.0 | 79/80(99%) | 0/80(0%) | Minus/Minus |
Query 73 VSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH*STTLSRENLSCPAPWC*SIPLRQTLKPLRLVA 312 VSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH*S TLSRENLSCPAPWC*SIPLRQTLKPLRLVA Subject 1896 VSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH*SITLSRENLSCPAPWC*SIPLRQTLKPLRLVA 2135
Grapevine leafroll associated virus 3 isolate 3 8 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130286.1 Length: 4711 Number of Matches: 6
Range 1: 1826 to 2134 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
254.0 bits(548) | 0.0 | 102/103(99%) | 0/103(0%) | Minus/Minus |
Query 3 YHGHYHVPHISWCLTPAFRKNESA*PCVYL*SFRNR*IPLVVDIRFIDRQH*VGKTYLALPPGVDQFRYVRR*SHYV*LL*WTYTFRRRWCYWTWR*QRRIVD 311 YHGHYHVPHISWCLTPAFRKNESA*PCVYL*SFRNR*IPLVVDIRFIDR H*VGKTYLALPPGVDQFRYVRR*SHYV*LL*WTYTFRRRWCYWTWR*QRRIVD Subject 1826 YHGHYHVPHISWCLTPAFRKNESA*PCVYL*SFRNR*IPLVVDIRFIDR*H*VGKTYLALPPGVDQFRYVRR*SHYV*LL*WTYTFRRRWCYWTWR*QRRIVD 2134
Range 2: 1825 to 2136 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
246.7 bits(532) | 0.0 | 103/104(99%) | 0/104(0%) | Plus/Plus |
Query 2 HRRCDVVSAKSSSTSAYGRCRSIRATRRSGFNV*RNGIDQHQGAGQDKFSRLSVVDQ*SGYLRRAVFTDYGSSTDKRKATQTRSFERRESNTTRYGEHDSGHDT 313 HRRCDVVSAKSSSTSAYGRCRSIRATRRSGFNV*RNGIDQHQGAGQDKFSRLSV+DQ*SGYLRRAVFTDYGSSTDKRKATQTRSFERRESNTTRYGEHDSGHDT Subject 1825 HRRCDVVSAKSSSTSAYGRCRSIRATRRSGFNV*RNGIDQHQGAGQDKFSRLSVIDQ*SGYLRRAVFTDYGSSTDKRKATQTRSFERRESNTTRYGEHDSGHDT 2136
Range 3: 1825 to 2136 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
237.0 bits(511) | 0.0 | 104/104(100%) | 0/104(0%) | Minus/Minus |
Query 2 CIMATIMFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKLILPCPLVLINSVTSDVKATTSSCSDGPTPSVGAGATGLGANNVASSM 313 CIMATIMFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKLILPCPLVLINSVTSDVKATTSSCSDGPTPSVGAGATGLGANNVASSM Subject 1825 CIMATIMFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKLILPCPLVLINSVTSDVKATTSSCSDGPTPSVGAGATGLGANNVASSM 2136
Range 4: 1826 to 2134 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
234.2 bits(510) | 0.0 | 103/103(100%) | 0/103(0%) | Plus/Plus |
Query 3 IDDATLLAPSPVAPAPTEGVGPSEQLDVVALTSDVTELINTRGQGKISFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMI 311 IDDATLLAPSPVAPAPTEGVGPSEQLDVVALTSDVTELINTRGQGKISFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMI Subject 1826 IDDATLLAPSPVAPAPTEGVGPSEQLDVVALTSDVTELINTRGQGKISFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMI 2134
Range 5: 1890 to 2135 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
187.1 bits(402) | 0.0 | 81/82(99%) | 0/82(0%) | Plus/Plus |
Query 67 HQSN*T*WL*RLT*RN*STPGGRAR*VFPTQCCRSMKRISTTSGIYRLRKLYR*TQGYADSFFRKAGVKHHEIWGT**WP*Y 312 HQSN*T*WL*RLT*RN*STPGGRAR*VFPTQC RSMKRISTTSGIYRLRKLYR*TQGYADSFFRKAGVKHHEIWGT**WP*Y Subject 1890 HQSN*T*WL*RLT*RN*STPGGRAR*VFPTQCYRSMKRISTTSGIYRLRKLYR*TQGYADSFFRKAGVKHHEIWGT**WP*Y 2135
Range 6: 1896 to 2135 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
186.2 bits(400) | 0.0 | 79/80(99%) | 0/80(0%) | Minus/Minus |
Query 73 VSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH*STTLSRENLSCPAPWC*SIPLRQTLKPLRLVA 312 VSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH*S TLSRENLSCPAPWC*SIPLRQTLKPLRLVA Subject 1896 VSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH*SITLSRENLSCPAPWC*SIPLRQTLKPLRLVA 2135
Grapevine leafroll associated virus 3 isolate 3 12 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130287.1 Length: 4711 Number of Matches: 6
Range 1: 1826 to 2134 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
254.0 bits(548) | 0.0 | 102/103(99%) | 0/103(0%) | Minus/Minus |
Query 3 YHGHYHVPHISWCLTPAFRKNESA*PCVYL*SFRNR*IPLVVDIRFIDRQH*VGKTYLALPPGVDQFRYVRR*SHYV*LL*WTYTFRRRWCYWTWR*QRRIVD 311 YHGHYHVPHISWCLTPAFRKNESA*PCVYL*SFRNR*IPLVVDIRFIDR H*VGKTYLALPPGVDQFRYVRR*SHYV*LL*WTYTFRRRWCYWTWR*QRRIVD Subject 1826 YHGHYHVPHISWCLTPAFRKNESA*PCVYL*SFRNR*IPLVVDIRFIDR*H*VGKTYLALPPGVDQFRYVRR*SHYV*LL*WTYTFRRRWCYWTWR*QRRIVD 2134
Range 2: 1825 to 2136 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
246.7 bits(532) | 0.0 | 103/104(99%) | 0/104(0%) | Plus/Plus |
Query 2 HRRCDVVSAKSSSTSAYGRCRSIRATRRSGFNV*RNGIDQHQGAGQDKFSRLSVVDQ*SGYLRRAVFTDYGSSTDKRKATQTRSFERRESNTTRYGEHDSGHDT 313 HRRCDVVSAKSSSTSAYGRCRSIRATRRSGFNV*RNGIDQHQGAGQDKFSRLSV+DQ*SGYLRRAVFTDYGSSTDKRKATQTRSFERRESNTTRYGEHDSGHDT Subject 1825 HRRCDVVSAKSSSTSAYGRCRSIRATRRSGFNV*RNGIDQHQGAGQDKFSRLSVIDQ*SGYLRRAVFTDYGSSTDKRKATQTRSFERRESNTTRYGEHDSGHDT 2136
Range 3: 1825 to 2136 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
237.0 bits(511) | 0.0 | 104/104(100%) | 0/104(0%) | Minus/Minus |
Query 2 CIMATIMFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKLILPCPLVLINSVTSDVKATTSSCSDGPTPSVGAGATGLGANNVASSM 313 CIMATIMFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKLILPCPLVLINSVTSDVKATTSSCSDGPTPSVGAGATGLGANNVASSM Subject 1825 CIMATIMFPISRGV*LPPFERTSLRSLAFICRASVIGKYRSS*ISASLIDNTESGKLILPCPLVLINSVTSDVKATTSSCSDGPTPSVGAGATGLGANNVASSM 2136
Range 4: 1826 to 2134 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
234.2 bits(510) | 0.0 | 103/103(100%) | 0/103(0%) | Plus/Plus |
Query 3 IDDATLLAPSPVAPAPTEGVGPSEQLDVVALTSDVTELINTRGQGKISFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMI 311 IDDATLLAPSPVAPAPTEGVGPSEQLDVVALTSDVTELINTRGQGKISFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMI Subject 1826 IDDATLLAPSPVAPAPTEGVGPSEQLDVVALTSDVTELINTRGQGKISFPDSVLSINEADIYDERYLPITEALQINARLRRLVLSKGGSQTPRDMGNMIVAMI 2134
Range 5: 1890 to 2135 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
187.1 bits(402) | 0.0 | 81/82(99%) | 0/82(0%) | Plus/Plus |
Query 67 HQSN*T*WL*RLT*RN*STPGGRAR*VFPTQCCRSMKRISTTSGIYRLRKLYR*TQGYADSFFRKAGVKHHEIWGT**WP*Y 312 HQSN*T*WL*RLT*RN*STPGGRAR*VFPTQC RSMKRISTTSGIYRLRKLYR*TQGYADSFFRKAGVKHHEIWGT**WP*Y Subject 1890 HQSN*T*WL*RLT*RN*STPGGRAR*VFPTQCYRSMKRISTTSGIYRLRKLYR*TQGYADSFFRKAGVKHHEIWGT**WP*Y 2135
Range 6: 1896 to 2135 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
186.2 bits(400) | 0.0 | 79/80(99%) | 0/80(0%) | Minus/Minus |
Query 73 VSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH*STTLSRENLSCPAPWC*SIPLRQTLKPLRLVA 312 VSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH*S TLSRENLSCPAPWC*SIPLRQTLKPLRLVA Subject 1896 VSWPLSCSPYLVVFDSRLSKERVCVALRLSVELP*SVNTARRRYPLH*SITLSRENLSCPAPWC*SIPLRQTLKPLRLVA 2135
Nucleotide Sequence (645 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
506.0 | 2750.5 | 33% | 1.913e-141 | 97% | KM058745.1 | |
267.3 | 535.0 | 57% | 1.398e-69 | 36% | JX220900.2 | |
265.5 | 464.6 | 47% | 5.013e-69 | 29% | HQ130309.1 | |
264.1 | 472.6 | 31% | 1.3e-68 | 30% | HQ130310.1 | |
264.1 | 472.6 | 31% | 1.3e-68 | 30% | HQ130311.1 |
Alignments
Grapevine leafroll associated virus 3 isolate GH24, complete genome
Sequence ID: KM058745.1 Length: 18493 Number of Matches: 8
Range 1: 17252 to 17896 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
506.0 bits(1098) | 0.0 | 214/215(100%) | 0/215(0%) | Plus/Minus |
Query 1 HPRDPTVGQEPISADEEIRVQFSRIFYCLQTR*CY*KMVLVTEIA*APLVFSGTSW*VAHFIHLHLFNHS*NAIGMPH*ASSYVCYATDVVVLER*VNTLNDYFFVHLFGDETIDERLYRIHFIQWVDNHTVPYRIAYVLKGVGQDVNR**IVTIYGGKNLHNYK*NIHFHLLEQRR*EIFNHVPLRYSRFASQGQSVASTLASRLTYQQIPNFR 645 HPRDPTVGQEPISADEEIRVQFSRIFYCLQTR*CY*KMVLVTEIA*APLVFSGTSW*VAHFIHLHLFNHS*NAIGMPH*ASSYVCYATDVVVLER*VNTLNDYFFVHLFGDETIDERLYRIHFIQWVDNHTVPYRIAYVLKGVGQDVNR**IVTIYGGKNLHNY+*NIHFHLLEQRR*EIFNHVPLRYSRFASQGQSVASTLASRLTYQQIPNFR Subject 17252 HPRDPTVGQEPISADEEIRVQFSRIFYCLQTR*CY*KMVLVTEIA*APLVFSGTSW*VAHFIHLHLFNHS*NAIGMPH*ASSYVCYATDVVVLER*VNTLNDYFFVHLFGDETIDERLYRIHFIQWVDNHTVPYRIAYVLKGVGQDVNR**IVTIYGGKNLHNYR*NIHFHLLEQRR*EIFNHVPLRYSRFASQGQSVASTLASRLTYQQIPNFR 17896
Range 2: 17254 to 17895 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
486.8 bits(1056) | 0.0 | 209/214(98%) | 0/214(0%) | Plus/Minus |
Query 2 ILAIPQLVKNPLVLMKKFAFNSPESSTACKPADVIKRWFWLQRSLKRLWYFLEPLGESHTSYISISLITAKTLSACPTKHPAMCVMQPTWSYSNAESIL*TIISLYICLVTKLLTNAFIVFTSFNGSTTTPSPIVSLTFLKALDKM*IADRSLLYMAERICIIINETSISTY*NKEGKRYSITFPCATLGSQVRVKAWLALLPLDSPINKYLTF 643 ILAIPQLVKNPLVL KKFAFNSPESSTACKPADVIKRWFWLQRSLKRLWYFLEPLGE HTSYISISLITAKTLSAC TKH AMCVMQPTWSYSNAESIL*TIISLYICLVTKLLTNAFIVFTSFNGSTTTPSPIVSLTFLKALDKM*IADRSLLYMAERICIII+ETSISTY*NKEGKRYSITFPCATLGSQVRVKAWLALLPLDSPINKYLTF Subject 17254 ILAIPQLVKNPLVLTKKFAFNSPESSTACKPADVIKRWFWLQRSLKRLWYFLEPLGELHTSYISISLITAKTLSACRTKHLAMCVMQPTWSYSNAESIL*TIISLYICLVTKLLTNAFIVFTSFNGSTTTPSPIVSLTFLKALDKM*IADRSLLYMAERICIIIDETSISTY*NKEGKRYSITFPCATLGSQVRVKAWLALLPLDSPINKYLTF 17895
Range 3: 17252 to 17896 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
484.9 bits(1052) | 0.0 | 210/215(98%) | 0/215(0%) | Minus/Plus |
Query 1 AKVRYLLIGESRGKSASHALTLTCEPRVAQGNVIEYLLPSLF**VEMDVSFIIMQILSAIYSNDLSAIYILSNAFKNVSDTIGDGVVVDPLNEVNTIKAFVNSFVTKQMYKEIIVQSIDSAFEYDHVGCITHIAGCLVGHADSVLAVIKEMEMYEVCDSPRGSRKYQRRLSDLCNQNHLLITSAGLQAVEDSGELNANFFISTNGFLTNCGIARM 645 AKVRYLLIGESRGKSASHALTLTCEPRVAQGNVIEYLLPSLF**VEMDVS IIMQILSAIYSNDLSAIYILSNAFKNVSDTIGDGVVVDPLNEVNTIKAFVNSFVTKQMYKEIIVQSIDSAFEYDHVGCITHIA CLV HADSVLAVIKEMEMYEVC+SPRGSRKYQRRLSDLCNQNHLLITSAGLQAVEDSGELNANFF+STNGFLTNCGIARM Subject 17252 AKVRYLLIGESRGKSASHALTLTCEPRVAQGNVIEYLLPSLF**VEMDVSSIIMQILSAIYSNDLSAIYILSNAFKNVSDTIGDGVVVDPLNEVNTIKAFVNSFVTKQMYKEIIVQSIDSAFEYDHVGCITHIARCLVRHADSVLAVIKEMEMYEVCNSPRGSRKYQRRLSDLCNQNHLLITSAGLQAVEDSGELNANFFVSTNGFLTNCGIARM 17896
Range 4: 17254 to 17895 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
480.8 bits(1043) | 0.0 | 210/214(98%) | 0/214(0%) | Minus/Plus |
Query 2 ES*VFVDR*V*RQEC*PRFDPDLRTESSARERD*ISLTFFVLVSGNGCFIYNYANSFRHI**RSISDLHLVQRL*ERKRYDRGRCGCRPIE*SEYDKGVRQ*FRHQTNVQRNNRSEY*LSVRVRPRRLHNTHSWMLSGACR*RFSCD*RDGDV*SVRLTKRFQKIPKALKRSL*PKPSFNNISGFASSRRFGRIEREFLHQH*WVLDQLWDRED 643 ES*VFVDR*V*RQEC*PRFDPDLRTESSARERD*ISLTFFVLVSGNGCFIYNYANSFRHI**RSISDLHLVQRL*ERKRYDRGRCGCRPIE*SEYDKGVRQ*FRHQTNVQRNNRSEY*LSVRVRPRRLHNTHS MLS ACR*RFSCD*RDGDV*SV+LTKRFQKIPKALKRSL*PKPSFNNISGFASSRRFGRIEREFL QH*WVLDQLWDRED Subject 17254 ES*VFVDR*V*RQEC*PRFDPDLRTESSARERD*ISLTFFVLVSGNGCFIYNYANSFRHI**RSISDLHLVQRL*ERKRYDRGRCGCRPIE*SEYDKGVRQ*FRHQTNVQRNNRSEY*LSVRVRPRRLHNTHS*MLSAACR*RFSCD*RDGDV*SVQLTKRFQKIPKALKRSL*PKPSFNNISGFASSRRFGRIEREFLRQH*WVLDQLWDRED 17895
Range 5: 17568 to 17894 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
220.5 bits(475) | 0.0 | 108/109(99%) | 0/109(0%) | Minus/Plus |
Query 3 PNKCTKK*SFRVLTQRXXXXXSVA*HT*LDA*WGMPIAF*L*LKRWRCMKCATHQEVPENTKGA*AISVTKTIF**HQRVCKQ*KIREN*TRISSSALMGS*PTVGSRG 329 PNKCTKK*SFRVLTQRSSTTTSVA*HT*LDA* GMPIAF*L*LKRWRCMKCATHQEVPENTKGA*AISVTKTIF**HQRVCKQ*KIREN*TRISSSALMGS*PTVGSRG Subject 17568 PNKCTKK*SFRVLTQRSSTTTSVA*HT*LDA*CGMPIAF*L*LKRWRCMKCATHQEVPENTKGA*AISVTKTIF**HQRVCKQ*KIREN*TRISSSALMGS*PTVGSRG 17894
Range 6: 17253 to 17531 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
213.2 bits(459) | 0.0 | 93/93(100%) | 0/93(0%) | Minus/Plus |
Query 366 RKLGIC**VSLEARVLATL*P*LANRE*RKGT*LNISYLLCSSKWKWMFHL*LCKFFPPYIVTIYQRFTSCPTPLRT*AIR*GTVWLSTH*MK 644 RKLGIC**VSLEARVLATL*P*LANRE*RKGT*LNISYLLCSSKWKWMFHL*LCKFFPPYIVTIYQRFTSCPTPLRT*AIR*GTVWLSTH*MK Subject 17253 RKLGIC**VSLEARVLATL*P*LANRE*RKGT*LNISYLLCSSKWKWMFHL*LCKFFPPYIVTIYQRFTSCPTPLRT*AIR*GTVWLSTH*MK 17531
Range 7: 17505 to 17858 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
229.7 bits(495) | 0.0 | 114/118(97%) | 0/118(0%) | Plus/Minus |
Query 39 C**RNSRSIXXXXXXXXXXXXXXKDGFGYRDRLSAFGIFWNLLVSRTLHTSPSL*SQLKRYRHAPLSIQLCVLCNRRGRTRTLSQYSERLFLCTFVW*RNY*RTPLSYSLHSMGRQPH 392 C* RNSRSILPNLLLLANPLMLLKDGFGYRDRLSAFGIFWNLLVS TLHTSPSL*SQLKRYRHA LSI LCVLCNRRGRTRTLSQYSERLFLCTFVW*RNY*RTPLSYSLHSMGRQPH Subject 17505 C*RRNSRSILPNLLLLANPLMLLKDGFGYRDRLSAFGIFWNLLVSCTLHTSPSL*SQLKRYRHAALSI*LCVLCNRRGRTRTLSQYSERLFLCTFVW*RNY*RTPLSYSLHSMGRQPH 17858
Range 8: 17295 to 17459 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.4 bits(274) | 0.0 | 55/55(100%) | 0/55(0%) | Plus/Minus |
Query 438 CKSLIDRYYIWRKEFA*L*MKHPFPLTRTKKVRDIQSRSLALLSVRKSGSKRG*H 602 CKSLIDRYYIWRKEFA*L*MKHPFPLTRTKKVRDIQSRSLALLSVRKSGSKRG*H Subject 17295 CKSLIDRYYIWRKEFA*L*MKHPFPLTRTKKVRDIQSRSLALLSVRKSGSKRG*H 17459
Grapevine leafroll associated virus 3 isolate NZ1 B polyprotein and RNA dependent RNA polymerase genes, partial cds; and 5 kDa protein, HSP70 like protein, HSP90 like protein, coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: JX220900.2 Length: 11827 Number of Matches: 5
Range 1: 10607 to 11251 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
267.3 bits(577) | 0.0 | 104/215(48%) | 0/215(0%) | Minus/Plus |
Query 1 AKVRYLLIGESRGKSASHALTLTCEPRVAQGNVIEYLLPSLF**VEMDVSFIIMQILSAIYSNDLSAIYILSNAFKNVSDTIGDGVVVDPLNEVNTIKAFVNSFVTKQMYKEIIVQSIDSAFEYDHVGCITHIAGCLVGHADSVLAVIKEMEMYEVCDSPRGSRKYQRRLSDLCNQNHLLITSAGLQAVEDSGELNANFFISTNGFLTNCGIARM 645 AKV Y LIG SRGK + +L L CE + G +++Y++ S *+ MD SFII+QILSA+Y+NDLSA+Y+L N++KN+ DT+G+G + DP ++N +K++V S T +++K I+ QSID + YD VGC+ +A L H+++VL +IKEME++EVC+ R S++Y + LSDLC+ H++IT AGL A+E++ L ++F+S NG++TNCG+ARM Subject 10607 AKVGYTLIGVSRGKDSGRSLKLHCEENTSNGGLLQYIIASSLG*IAMDFSFIIVQILSALYNNDLSALYLLINSYKNIVDTVGEGGLDDPQAQINALKSYVASCSTTELHKSILTQSIDLSANYDAVGCLISLARNLTKHSEAVLEIIKEMELFEVCNGKRASKRYLKHLSDLCSNKHMIITQAGLTAIEEADLLRTHYFVSENGYVTNCGLARM 11251
Range 2: 10609 to 11250 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
133.0 bits(284) | 0.0 | 91/214(43%) | 0/214(0%) | Plus/Minus |
Query 2 ILAIPQLVKNPLVLMKKFAFNSPESSTACKPADVIKRWFWLQRSLKRLWYFLEPLGESHTSYISISLITAKTLSACPTKHPAMCVMQPTWSYSNAESIL*TIISLYICLVTKLLTNAFIVFTSFNGSTTTPSPIVSLTFLKALDKM*IADRSLLYMAERICIIINETSISTY*NKEGKRYSITFPCATLGSQVRVKAWLALLPLDSPINKYLTF 643 ILA PQLV P L K + SS A PA VI QRSLK L Y L L HTS SISL+ +KT S C + A + PT S +S+L I L +V T F F GS+ PSP VS FL L K ADRSLLY AE IC +INE SI+ +E Y P SQ K LP D+PIN Y TF Subject 10609 ILASPQLVTYPFSLTK*CVRSRSASSMAVSPA*VIIMCLLEQRSLKCLRYLLLALFPLHTSNNSISLMISKTASECFVRFLAKLIKHPTAS*LADKSMLWVKIDLCSSVVEHEATYDFKAFICACGSSNPPSPTVSTMFL*LLIKRYSADRSLLYKAESICTMINEKSIAI*PREEAIIYCSKPPFEVFSSQCNFKERPLSLPRDTPINVYPTF 11250
Range 3: 10607 to 10903 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
57.0 bits(118) | 0.0 | 36/99(36%) | 0/99(0%) | Plus/Minus |
Query 349 RLYRIHFIQWVDNHTVPYRIAYVLKGVGQDVNR**IVTIYGGKNLHNYK*NIHFHLLEQRR*EIFNHVPLRYSRFASQGQSVASTLASRLTYQQIPNFR 645 RL ++ WV P R+ VL + ++ R**IV + GK LH+ K IH L +R I P+ FA Q Q ++ L SR + +IPNFR Subject 10607 RL*SVYLRLWVV*PPFPNRVDDVLITIN*EIQR**IVVVQSGKYLHDDKRKIHSDLT*RRSDNILQ*TPV*SILFAVQLQGASAILTSRYSN*RIPNFR 10903
Range 4: 10608 to 10877 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
49.2 bits(101) | 0.0 | 36/90(40%) | 0/90(0%) | Minus/Plus |
Query 375 RKLGIC**VSLEARVLATL*P*LANRE*RKGT*LNISYLLCSSKWKWMFHL*LCKFFPPYIVTIYQRFTSCPTPLRT*AIR*GTVWLSTH 644 RKLGI * LE R+ * A R + G +I LL K W+F L CK+FP TIYQR S +RT + R G +TH Subject 10608 RKLGIR*LEYLEVRIADAP*SCTAKRILQTGVYCSILSLLL*VKSLWIFRLSSCKYFPLCTTTIYQRCIS*LIVIRTSSTRLGKGG*TTH 10877
Grapevine leafroll associated virus 3 isolate 7 110 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130309.1 Length: 4711 Number of Matches: 3
Range 1: 3521 to 4165 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
265.5 bits(573) | 0.0 | 110/215(51%) | 0/215(0%) | Minus/Plus |
Query 1 AKVRYLLIGESRGKSASHALTLTCEPRVAQGNVIEYLLPSLF**VEMDVSFIIMQILSAIYSNDLSAIYILSNAFKNVSDTIGDGVVVDPLNEVNTIKAFVNSFVTKQMYKEIIVQSIDSAFEYDHVGCITHIAGCLVGHADSVLAVIKEMEMYEVCDSPRGSRKYQRRLSDLCNQNHLLITSAGLQAVEDSGELNANFFISTNGFLTNCGIARM 645 AKVRY+L GE RG +L L C R GNV+++LL S * MD+SFII+QILSA+Y+ND +A+YIL NA+K+V+DT+G+ + +P EV+ +KA+V + T +++K I++ SIDSAF YD +GC+ IA LV H+++VL +IK ME++EVC RGSRKY LSD C+ H+++T AGL AV+++ L N+ +STNGF++NCGIARM Subject 3521 AKVRYILSGERRGLKCVDSLELVCIGREGSGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDATALYILINAYKSVADTVGETAIGNPQAEVDVVKAYVTTTATTELHKTILIDSIDSAFAYDGIGCLVGIARGLVKHSENVLEIIKSMELFEVCRGKRGSRKYLGCLSDYCSSKHMMLTQAGLAAVDEADVLRTNYLVSTNGFVSNCGIARM 4165
Range 2: 3523 to 4164 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
138.1 bits(295) | 0.0 | 93/214(43%) | 0/214(0%) | Plus/Minus |
Query 2 ILAIPQLVKNPLVLMKKFAFNSPESSTACKPADVIKRWFWLQRSLKRLWYFLEPLGESHTSYISISLITAKTLSACPTKHPAMCVMQPTWSYSNAESIL*TIISLYICLVTKLLTNAFIVFTSFNGSTTTPSPIVSLTFLKALDKM*IADRSLLYMAERICIIINETSISTY*NKEGKRYSITFPCATLGSQVRVKAWLALLPLDSPINKYLTF 643 ILAIPQ NPLVL + F ++ SSTA PA V Q SLK YFL PL HTS SI + ++T S C TK AM P S + AESIL I L +V ++T AF TS G SP VS T L AL ++ A SLLY AERIC IIN+ SI E + TFP +L Q K P SP YLTF Subject 3523 ILAIPQFETNPLVLTR*FVRSTSASSTAANPA*VSIMCLLEQ*SLKHPRYFLLPLFPRHTSNNSIDFMISRTFSECLTKPLAMPTKHPIPS*AKAESILSIRIVLCSSVVAVVVT*AFTTSTSACGLPIAVSPTVSATLLYALIRIYSAVASLLYKAERICTIINDRSIIL*PRDEISKCCSTFPLPSLPIQTSSKESTHFNPRLSPDKIYLTF 4164
Range 3: 3521 to 4036 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
61.1 bits(127) | 0.0 | 50/172(29%) | 0/172(0%) | Plus/Minus |
Query 130 IA*APLVFSGTSW*VAHFIHLHLFNHS*NAIGMPH*ASSYVCYATDVVVLER*VNTLNDYFFVHLFGDETIDERLYRIHFIQWVDNHTVPYRIAYVLKGVGQDVNR**IVTIYGGKNLHNYK*NIHFHLLEQRR*EIFNHVPLRYSRFASQGQSVASTLASRLTYQQIPNFR 645 IA* P +FS + HF LH N M +* SY V+ E V T+N + L + L+ I+ W+ + Y I+ V QD+ R ++ + G K+LH+ K* +H+ L + * + +V +S + +Q V + S L IPNFR Subject 3521 IA*TPKIFSASPLSTTHFE*LH*LYDFQNIF*MFN*TPSYAH*TPYSVISEGGVYTVNKNRLMQLSRRSSSYVSLHNINLSLWIAYRCLAYCISNTFIRVNQDIQRCCVIIV*GRKDLHDNK**VHYTLT*R*D**VL*YVSTSFSTYTNQL*GVYTL*PSSLP**NIPNFR 4036
Grapevine leafroll associated virus 3 isolate 7 112 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130310.1 Length: 4711 Number of Matches: 4
Range 1: 3521 to 4165 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
264.1 bits(570) | 0.0 | 109/215(51%) | 0/215(0%) | Minus/Plus |
Query 1 AKVRYLLIGESRGKSASHALTLTCEPRVAQGNVIEYLLPSLF**VEMDVSFIIMQILSAIYSNDLSAIYILSNAFKNVSDTIGDGVVVDPLNEVNTIKAFVNSFVTKQMYKEIIVQSIDSAFEYDHVGCITHIAGCLVGHADSVLAVIKEMEMYEVCDSPRGSRKYQRRLSDLCNQNHLLITSAGLQAVEDSGELNANFFISTNGFLTNCGIARM 645 AKVRY+L GE RG +L L C R GNV+++LL S * MD+SFII+QILSA+Y+ND +A+YIL NA+K+V+DT+G+ + +P EV+ +KA+V + T ++++ I++ SIDSAF YD +GC+ IA LV H+++VL +IK ME++EVC RGSRKY LSD C+ H+++T AGL AV+++ L N+ +STNGF++NCGIARM Subject 3521 AKVRYILSGERRGLKCVDSLELVCIGREGSGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDATALYILINAYKSVADTVGETAIGNPQAEVDVVKAYVTTTATTELHRTILIDSIDSAFAYDGIGCLVGIARGLVKHSENVLEIIKSMELFEVCRGKRGSRKYLGCLSDYCSSKHMMLTQAGLAAVDEADVLRTNYLVSTNGFVSNCGIARM 4165
Range 2: 3523 to 4164 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
138.1 bits(295) | 0.0 | 93/214(43%) | 0/214(0%) | Plus/Minus |
Query 2 ILAIPQLVKNPLVLMKKFAFNSPESSTACKPADVIKRWFWLQRSLKRLWYFLEPLGESHTSYISISLITAKTLSACPTKHPAMCVMQPTWSYSNAESIL*TIISLYICLVTKLLTNAFIVFTSFNGSTTTPSPIVSLTFLKALDKM*IADRSLLYMAERICIIINETSISTY*NKEGKRYSITFPCATLGSQVRVKAWLALLPLDSPINKYLTF 643 ILAIPQ NPLVL + F ++ SSTA PA V Q SLK YFL PL HTS SI + ++T S C TK AM P S + AESIL I L +V ++T AF TS G SP VS T L AL ++ A SLLY AERIC IIN+ SI E + TFP +L Q K P SP YLTF Subject 3523 ILAIPQFETNPLVLTR*FVRSTSASSTAANPA*VSIMCLLEQ*SLKHPRYFLLPLFPRHTSNNSIDFMISRTFSECLTKPLAMPTKHPIPS*AKAESILSIRIVLCSSVVAVVVT*AFTTSTSACGLPIAVSPTVSATLLYALIRIYSAVASLLYKAERICTIINDRSIIL*PRDEISKCCSTFPLPSLPIQTSSKESTHFNPRLSPDKIYLTF 4164
Range 3: 3521 to 3814 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
46.4 bits(95) | 0.0 | 29/98(30%) | 0/98(0%) | Plus/Minus |
Query 352 LYRIHFIQWVDNHTVPYRIAYVLKGVGQDVNR**IVTIYGGKNLHNYK*NIHFHLLEQRR*EIFNHVPLRYSRFASQGQSVASTLASRLTYQQIPNFR 645 L+ I+ W+ + Y I+ V QD+ R ++ + G K+LH+ K* +H+ L + * + +V +S + +Q V + S L IPNFR Subject 3521 LHNINLSLWIAYRCLAYCISNTFIRVNQDIQRCCVIIV*GRKDLHDNK**VHYTLT*R*D**VL*YVSTSFSTYTNQL*GVYTL*PSSLP**NIPNFR 3814
Range 4: 3863 to 4036 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
24.0 bits(46) | 0.0 | 20/58(34%) | 0/58(0%) | Plus/Minus |
Query 130 IA*APLVFSGTSW*VAHFIHLHLFNHS*NAIGMPH*ASSYVCYATDVVVLER*VNTLN 303 IA* P +FS + HF LH N M +* SY V+ E V T+N Subject 3863 IA*TPKIFSASPLSTTHFE*LH*LYDFQNIF*MFN*TPSYAH*TPYSVISEGGVYTVN 4036
Grapevine leafroll associated virus 3 isolate 7 123 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130311.1 Length: 4711 Number of Matches: 4
Range 1: 3521 to 4165 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
264.1 bits(570) | 0.0 | 109/215(51%) | 0/215(0%) | Minus/Plus |
Query 1 AKVRYLLIGESRGKSASHALTLTCEPRVAQGNVIEYLLPSLF**VEMDVSFIIMQILSAIYSNDLSAIYILSNAFKNVSDTIGDGVVVDPLNEVNTIKAFVNSFVTKQMYKEIIVQSIDSAFEYDHVGCITHIAGCLVGHADSVLAVIKEMEMYEVCDSPRGSRKYQRRLSDLCNQNHLLITSAGLQAVEDSGELNANFFISTNGFLTNCGIARM 645 AKVRY+L GE RG +L L C R GNV+++LL S * MD+SFII+QILSA+Y+ND +A+YIL NA+K+V+DT+G+ + +P EV+ +KA+V + T ++++ I++ SIDSAF YD +GC+ IA LV H+++VL +IK ME++EVC RGSRKY LSD C+ H+++T AGL AV+++ L N+ +STNGF++NCGIARM Subject 3521 AKVRYILSGERRGLKCVDSLELVCIGREGSGNVLQHLLISSLG*SIMDLSFIIVQILSALYNNDATALYILINAYKSVADTVGETAIGNPQAEVDVVKAYVTTTATTELHRTILIDSIDSAFAYDGIGCLVGIARGLVKHSENVLEIIKSMELFEVCRGKRGSRKYLGCLSDYCSSKHMMLTQAGLAAVDEADVLRTNYLVSTNGFVSNCGIARM 4165
Range 2: 3523 to 4164 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
138.1 bits(295) | 0.0 | 93/214(43%) | 0/214(0%) | Plus/Minus |
Query 2 ILAIPQLVKNPLVLMKKFAFNSPESSTACKPADVIKRWFWLQRSLKRLWYFLEPLGESHTSYISISLITAKTLSACPTKHPAMCVMQPTWSYSNAESIL*TIISLYICLVTKLLTNAFIVFTSFNGSTTTPSPIVSLTFLKALDKM*IADRSLLYMAERICIIINETSISTY*NKEGKRYSITFPCATLGSQVRVKAWLALLPLDSPINKYLTF 643 ILAIPQ NPLVL + F ++ SSTA PA V Q SLK YFL PL HTS SI + ++T S C TK AM P S + AESIL I L +V ++T AF TS G SP VS T L AL ++ A SLLY AERIC IIN+ SI E + TFP +L Q K P SP YLTF Subject 3523 ILAIPQFETNPLVLTR*FVRSTSASSTAANPA*VSIMCLLEQ*SLKHPRYFLLPLFPRHTSNNSIDFMISRTFSECLTKPLAMPTKHPIPS*AKAESILSIRIVLCSSVVAVVVT*AFTTSTSACGLPIAVSPTVSATLLYALIRIYSAVASLLYKAERICTIINDRSIIL*PRDEISKCCSTFPLPSLPIQTSSKESTHFNPRLSPDKIYLTF 4164
Range 3: 3521 to 3814 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
46.4 bits(95) | 0.0 | 29/98(30%) | 0/98(0%) | Plus/Minus |
Query 352 LYRIHFIQWVDNHTVPYRIAYVLKGVGQDVNR**IVTIYGGKNLHNYK*NIHFHLLEQRR*EIFNHVPLRYSRFASQGQSVASTLASRLTYQQIPNFR 645 L+ I+ W+ + Y I+ V QD+ R ++ + G K+LH+ K* +H+ L + * + +V +S + +Q V + S L IPNFR Subject 3521 LHNINLSLWIAYRCLAYCISNTFIRVNQDIQRCCVIIV*GRKDLHDNK**VHYTLT*R*D**VL*YVSTSFSTYTNQL*GVYTL*PSSLP**NIPNFR 3814
Range 4: 3863 to 4036 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
24.0 bits(46) | 0.0 | 20/58(34%) | 0/58(0%) | Plus/Minus |
Query 130 IA*APLVFSGTSW*VAHFIHLHLFNHS*NAIGMPH*ASSYVCYATDVVVLER*VNTLN 303 IA* P +FS + HF LH N M +* SY V+ E V T+N Subject 3863 IA*TPKIFSASPLSTTHFE*LH*LYDFQNIF*MFN*TPSYAH*TPYSVISEGGVYTVN 4036
Nucleotide Sequence (417 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
245.8 | 1329.7 | 20% | 2.238e-63 | 92% | KM058745.1 | |
185.7 | 420.3 | 24% | 2.626e-45 | 40% | GQ352632.1 | |
185.7 | 420.3 | 24% | 2.626e-45 | 40% | KX701860.1 | |
185.7 | 421.4 | 22% | 6.932e-46 | 36% | GQ352633.1 | |
185.7 | 413.9 | 23% | 2.626e-45 | 39% | AB222854.1 |
Alignments
Grapevine leafroll associated virus 3 isolate GH24, complete genome
Sequence ID: KM058745.1 Length: 18493 Number of Matches: 6
Range 1: 13442 to 13780 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
245.8 bits(530) | 0.0 | 104/113(92%) | 0/113(0%) | Minus/Minus |
Query 1 SR*SVLGVFGEAVESFQ*PDYHSSLCNV*FARDA*DLLHPSFST*YNQRYHKLSDHRHKTVFSNYSCKCRNNV*LNM*GHCSTYTRLSAHLYHTSPTTYTRVLPLLARILLSS 339 SR + + +AVESFQ*PDYHSSLCNV*FARDA*DLLHPSFST*YNQRYHKLSDHRHKTVFSNYSCKCRNNV*LNM*GHCSTYTRLSAHLYHTSPTTYTRVLPLLARILLSS Subject 13442 SRRRIPNINVDAVESFQ*PDYHSSLCNV*FARDA*DLLHPSFST*YNQRYHKLSDHRHKTVFSNYSCKCRNNV*LNM*GHCSTYTRLSAHLYHTSPTTYTRVLPLLARILLSS 13780
Range 2: 13443 to 13781 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
238.0 bits(513) | 0.0 | 106/113(94%) | 0/113(0%) | Plus/Plus |
Query 2 EERSILARSGRTRV*VVGEVWYKCAESRV*VLQ*PHMFS*TLLRHLQE*LENTVLCRWSLSL*YR*LYHVENEGCSRSYASRANYTLHKDE**SGYWNDSTASPNTPNTLYRD 340 EERSILARSGRTRV*VVGEVWYKCAESRV*VLQ*PHMFS*TLLRHLQE*LENTVLCRWSLSL*YR*LYHVENEGCSRSYASRANYTLHKDE**SGYWNDSTAS L RD Subject 13443 EERSILARSGRTRV*VVGEVWYKCAESRV*VLQ*PHMFS*TLLRHLQE*LENTVLCRWSLSL*YR*LYHVENEGCSRSYASRANYTLHKDE**SGYWNDSTASTLMFGILLRD 13781
Range 3: 13444 to 13728 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
236.1 bits(509) | 0.0 | 95/95(100%) | 0/95(0%) | Plus/Plus |
Query 3 KREVSLQGVEERAYRLSEKYGINAQRVVCRYYSDLTCLARRYYGIYRNNWKTLSYVDGRLAYDTADCITSKMKGVVDPTHHAQIIHYIKTNDNQV 287 KREVSLQGVEERAYRLSEKYGINAQRVVCRYYSDLTCLARRYYGIYRNNWKTLSYVDGRLAYDTADCITSKMKGVVDPTHHAQIIHYIKTNDNQV Subject 13444 KREVSLQGVEERAYRLSEKYGINAQRVVCRYYSDLTCLARRYYGIYRNNWKTLSYVDGRLAYDTADCITSKMKGVVDPTHHAQIIHYIKTNDNQV 13728
Range 4: 13443 to 13727 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
213.2 bits(459) | 0.0 | 95/95(100%) | 0/95(0%) | Minus/Minus |
Query 2 T*LSFVFM*CIICA*CVGSTTPFIFDVIQSAVS*AKRPST*DSVFQLFL*MP**RLAKHVRSL*YLHTTLCAFIPYFSDNLYARSSTPCKDTSLF 286 T*LSFVFM*CIICA*CVGSTTPFIFDVIQSAVS*AKRPST*DSVFQLFL*MP**RLAKHVRSL*YLHTTLCAFIPYFSDNLYARSSTPCKDTSLF Subject 13443 T*LSFVFM*CIICA*CVGSTTPFIFDVIQSAVS*AKRPST*DSVFQLFL*MP**RLAKHVRSL*YLHTTLCAFIPYFSDNLYARSSTPCKDTSLF 13727
Range 5: 13444 to 13707 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
206.8 bits(445) | 0.0 | 88/88(100%) | 0/88(0%) | Minus/Minus |
Query 3 YVMYNLRVMRRIYYTLHFRRDTISGIIS*ATIDIRQCFPIIPVNAVITSS*TCEVTVVPTHDSLRIYTILLRQPIRAFFHSLQGYFSL 266 YVMYNLRVMRRIYYTLHFRRDTISGIIS*ATIDIRQCFPIIPVNAVITSS*TCEVTVVPTHDSLRIYTILLRQPIRAFFHSLQGYFSL Subject 13444 YVMYNLRVMRRIYYTLHFRRDTISGIIS*ATIDIRQCFPIIPVNAVITSS*TCEVTVVPTHDSLRIYTILLRQPIRAFFHSLQGYFSL 13707
Range 6: 13442 to 13693 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
189.8 bits(408) | 0.0 | 84/84(100%) | 0/84(0%) | Plus/Plus |
Query 1 RREKYPCKEWKNARIGCRRSMV*MRRESCVGTTVTSHV*LDVITAFTGIIGKHCLMSMVA*LMIPLIVSRRK*RV**ILRITRK 252 RREKYPCKEWKNARIGCRRSMV*MRRESCVGTTVTSHV*LDVITAFTGIIGKHCLMSMVA*LMIPLIVSRRK*RV**ILRITRK Subject 13442 RREKYPCKEWKNARIGCRRSMV*MRRESCVGTTVTSHV*LDVITAFTGIIGKHCLMSMVA*LMIPLIVSRRK*RV**ILRITRK 13693
Grapevine leafroll associated virus 3 isolate 623, complete genome
Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 4
Range 1: 13450 to 13728 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
185.7 bits(399) | 0.0 | 72/93(77%) | 0/93(0%) | Plus/Plus |
Query 9 EVSLQGVEERAYRLSEKYGINAQRVVCRYYSDLTCLARRYYGIYRNNWKTLSYVDGRLAYDTADCITSKMKGVVDPTHHAQIIHYIKTNDNQV 287 +VSL+GVE+RAYR+SEK GINAQR++CRYYSDLTCLARR+YGI RNNWKTLSYVDG LAYDTADCITSK++ +++ HA IIHYIKTN+NQV Subject 13450 KVSLRGVEDRAYRISEKRGINAQRILCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRSMINHADHASIIHYIKTNENQV 13728
Range 2: 13452 to 13727 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
104.2 bits(221) | 0.0 | 58/92(63%) | 0/92(0%) | Minus/Minus |
Query 11 T*LSFVFM*CIICA*CVGSTTPFIFDVIQSAVS*AKRPST*DSVFQLFL*MP**RLAKHVRSL*YLHTTLCAFIPYFSDNLYARSSTPCKDT 286 T SFV +*CI+ A* +VIQSAVS A PST* SVFQLFL MP* RLA+HVRSL*YLH AFIP FSD L ARSSTP +T Subject 13452 TWFSFVLI*CIMLA*SAWLIILLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNIR*AFIPRFSDIL*ARSSTPRNET 13727
Range 3: 13468 to 13704 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
70.7 bits(148) | 0.0 | 33/79(42%) | 0/79(0%) | Minus/Minus |
Query 27 VMYNLRVMRRIYYTLHFRRDTISGIIS*ATIDIRQCFPIIPVNAVITSS*TCEVTVVPTHDSLRIYTILLRQPIRAFFH 263 ++YN V+ + +T H R TIS +I TI I Q PI+ NAV++ S TCE+T+VPT +L +Y L I A F+ Subject 13468 IVYNASVICMVDHTSHLRSYTISRVIRQRTIYITQRLPIVSANAVMSPSQTCEITIVPTQYTLSVYPALF*YSIGAIFY 13704
Range 4: 13452 to 13745 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
59.7 bits(124) | 0.0 | 39/98(40%) | 0/98(0%) | Plus/Plus |
Query 11 SILARSGRTRV*VVGEVWYKCAESRV*VLQ*PHMFS*TLLRHLQE*LENTVLCRWSLSL*YR*LYHVENEGCSRSYASRANYTLHKDE**SGYWNDST 304 S + R+R+* + + K + V*VL * HM * LRH Q+ LE+ LCRW + +*+ *LY+ E + SR +YTL+ DE GY + ST Subject 13452 SFVTGGRRSRL*NIRKARDKRSTYIV*VL**SHMSG*ATLRHSQKQLEDAELCRWYVGV*HG*LYNF*GEKYDQPCRSR*HYTLY*DERKPGYRDYST 13745
Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome
Sequence ID: KX701860.1 Length: 18020 Number of Matches: 4
Range 1: 12968 to 13246 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
185.7 bits(399) | 0.0 | 72/93(77%) | 0/93(0%) | Plus/Plus |
Query 9 EVSLQGVEERAYRLSEKYGINAQRVVCRYYSDLTCLARRYYGIYRNNWKTLSYVDGRLAYDTADCITSKMKGVVDPTHHAQIIHYIKTNDNQV 287 +VSL+GVE+RAYR+SEK GINAQR++CRYYSDLTCLARR+YGI RNNWKTLSYVDG LAYDTADCITSK++ +++ HA IIHYIKTN+NQV Subject 12968 KVSLRGVEDRAYRISEKRGINAQRILCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRSMINHADHASIIHYIKTNENQV 13246
Range 2: 12970 to 13245 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
104.2 bits(221) | 0.0 | 58/92(63%) | 0/92(0%) | Minus/Minus |
Query 11 T*LSFVFM*CIICA*CVGSTTPFIFDVIQSAVS*AKRPST*DSVFQLFL*MP**RLAKHVRSL*YLHTTLCAFIPYFSDNLYARSSTPCKDT 286 T SFV +*CI+ A* +VIQSAVS A PST* SVFQLFL MP* RLA+HVRSL*YLH AFIP FSD L ARSSTP +T Subject 12970 TWFSFVLI*CIMLA*SAWLIILLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNIR*AFIPRFSDIL*ARSSTPRNET 13245
Range 3: 12986 to 13222 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
70.7 bits(148) | 0.0 | 33/79(42%) | 0/79(0%) | Minus/Minus |
Query 27 VMYNLRVMRRIYYTLHFRRDTISGIIS*ATIDIRQCFPIIPVNAVITSS*TCEVTVVPTHDSLRIYTILLRQPIRAFFH 263 ++YN V+ + +T H R TIS +I TI I Q PI+ NAV++ S TCE+T+VPT +L +Y L I A F+ Subject 12986 IVYNASVICMVDHTSHLRSYTISRVIRQRTIYITQRLPIVSANAVMSPSQTCEITIVPTQYTLSVYPALF*YSIGAIFY 13222
Range 4: 12970 to 13263 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
59.7 bits(124) | 0.0 | 39/98(40%) | 0/98(0%) | Plus/Plus |
Query 11 SILARSGRTRV*VVGEVWYKCAESRV*VLQ*PHMFS*TLLRHLQE*LENTVLCRWSLSL*YR*LYHVENEGCSRSYASRANYTLHKDE**SGYWNDST 304 S + R+R+* + + K + V*VL * HM * LRH Q+ LE+ LCRW + +*+ *LY+ E + SR +YTL+ DE GY + ST Subject 12970 SFVTGGRRSRL*NIRKARDKRSTYIV*VL**SHMSG*ATLRHSQKQLEDAELCRWYVGV*HG*LYNF*GEKYDQPCRSR*HYTLY*DERKPGYRDYST 13263
Grapevine leafroll associated virus 3 isolate PL 20, complete genome
Sequence ID: GQ352633.1 Length: 18433 Number of Matches: 5
Range 1: 13385 to 13663 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
185.7 bits(399) | 0.0 | 70/93(75%) | 0/93(0%) | Plus/Plus |
Query 9 EVSLQGVEERAYRLSEKYGINAQRVVCRYYSDLTCLARRYYGIYRNNWKTLSYVDGRLAYDTADCITSKMKGVVDPTHHAQIIHYIKTNDNQV 287 +VSL+GVEERAYR+SEK G+NAQR++CRYYSDLTC+ARR+YGI+RNNWKTLSYVDG LAYDTADCITSK++ +++ HA+IIHYIK+N+NQV Subject 13385 KVSLRGVEERAYRISEKRGVNAQRLLCRYYSDLTCMARRHYGIHRNNWKTLSYVDGTLAYDTADCITSKVRNMINQADHARIIHYIKSNENQV 13663
Range 2: 13660 to 13716 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
22.1 bits(42) | 0.0 | 8/19(42%) | 0/19(0%) | Plus/Plus |
Query 284 GYWNDSTASPNTPNTLYRD 340 GYW+ ST TP+ + D Subject 13660 GYWDYSTTPALTPSVVCDD 13716
Range 3: 13387 to 13662 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
93.6 bits(198) | 0.0 | 55/92(60%) | 0/92(0%) | Minus/Minus |
Query 11 T*LSFVFM*CIICA*CVGSTTPFIFDVIQSAVS*AKRPST*DSVFQLFL*MP**RLAKHVRSL*YLHTTLCAFIPYFSDNLYARSSTPCKDT 286 T S +*CII A* +V+QSAVS A PST* SVFQLFL*+P* RLA HVRSL*YLH AF P FSD L ARSSTP +T Subject 13387 TWFSLDLI*CIILA*SAWLIIFLTLEVMQSAVSYANVPST*LSVFQLFL*IP*CRLAIHVRSL*YLHNKR*AFTPRFSDIL*ARSSTPRNET 13662
Range 4: 13403 to 13639 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
68.0 bits(142) | 0.0 | 30/79(38%) | 0/79(0%) | Minus/Minus |
Query 27 VMYNLRVMRRIYYTLHFRRDTISGIIS*ATIDIRQCFPIIPVNAVITSS*TCEVTVVPTHDSLRIYTILLRQPIRAFFH 263 ++YN ++ + + H +S +I * T+ I Q PI+PVN V++ S TCE+ VVPT +L ++ L R PI FF+ Subject 13403 IVYNPSMICLVDHISHLGSYAVSRVIC*RTVHITQRLPIVPVNTVMSPSHTCEIAVVPT**TLSVHPTLFRYPIGTFFY 13639
Range 5: 13393 to 13641 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.9 bits(107) | 0.0 | 30/83(36%) | 0/83(0%) | Plus/Plus |
Query 17 LARSGRTRV*VVGEVWYKCAESRV*VLQ*PHMFS*TLLRHLQE*LENTVLCRWSLSL*YR*LYHVENEGCSRSYASRANYTLH 265 + R RT +* +G+ W + + +*VLQ HM+ * LR+ QE LE+ LC +S+*+ *L++ + E + S +YTL+ Subject 13393 VTRGRRTCL*DIGKAWGERSTFIM*VLQRSHMYG*ATLRYSQEQLEDAELCGRYVSI*HG*LHNFQGEKYDQPSRSC*DYTLY 13641
Grapevine leafroll associated virus 3 gene for 55 KDa protein, partial cds, isolate: LR3 OkAQ
Sequence ID: AB222854.1 Length: 334 Number of Matches: 4
Range 1: 53 to 331 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
185.7 bits(399) | 0.0 | 72/93(77%) | 0/93(0%) | Plus/Plus |
Query 9 EVSLQGVEERAYRLSEKYGINAQRVVCRYYSDLTCLARRYYGIYRNNWKTLSYVDGRLAYDTADCITSKMKGVVDPTHHAQIIHYIKTNDNQV 287 +VSL+GVE+RAYR+SEK GINAQR++CRYYSDLTCLARR+YGI RNNWKTLSYVDG LAYDTADCITSK++ +++ HA IIHYIKTN+NQV Subject 53 KVSLRGVEDRAYRISEKRGINAQRILCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRSMINHADHASIIHYIKTNENQV 331
Range 2: 55 to 330 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
104.2 bits(221) | 0.0 | 58/92(63%) | 0/92(0%) | Minus/Minus |
Query 11 T*LSFVFM*CIICA*CVGSTTPFIFDVIQSAVS*AKRPST*DSVFQLFL*MP**RLAKHVRSL*YLHTTLCAFIPYFSDNLYARSSTPCKDT 286 T SFV +*CI+ A* +VIQSAVS A PST* SVFQLFL MP* RLA+HVRSL*YLH AFIP FSD L ARSSTP +T Subject 55 TWFSFVLI*CIMLA*SAWLIILLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNIR*AFIPRFSDIL*ARSSTPRNET 330
Range 3: 71 to 307 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
68.9 bits(144) | 0.0 | 32/79(41%) | 0/79(0%) | Minus/Minus |
Query 27 VMYNLRVMRRIYYTLHFRRDTISGIIS*ATIDIRQCFPIIPVNAVITSS*TCEVTVVPTHDSLRIYTILLRQPIRAFFH 263 ++YN V+ + +T H R TIS +I TI I Q PI+ NAV++ S TC++T+VPT +L +Y L I A F+ Subject 71 IVYNASVICMVDHTSHLRSYTISRVIRQRTIYITQRLPIVSANAVMSPSQTCKITIVPTQYTLSVYPALF*YSIGAIFY 307
Range 4: 55 to 333 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
55.1 bits(114) | 0.0 | 36/93(39%) | 0/93(0%) | Plus/Plus |
Query 11 SILARSGRTRV*VVGEVWYKCAESRV*VLQ*PHMFS*TLLRHLQE*LENTVLCRWSLSL*YR*LYHVENEGCSRSYASRANYTLHKDE**SGY 289 S + R+R+* + + K + V*VL * +M * LRH Q+ LE+ LCRW + +*+ *LY+ E + SR +YTL+ DE GY Subject 55 SFVTGGRRSRL*NIRKARDKRSTYIV*VL**SYMSG*ATLRHSQKQLEDAELCRWYVGV*HG*LYNF*GEKYDQPCRSR*HYTLY*DERKPGY 333
Nucleotide Sequence (334 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
259.0 | 1494.4 | 27% | 1.539e-67 | 98% | KJ174518.1 | |
259.0 | 1449.0 | 27% | 1.539e-67 | 92% | KP866979.1 | |
259.0 | 1494.4 | 27% | 1.539e-67 | 98% | KP866981.1 | |
259.0 | 1494.4 | 27% | 1.539e-67 | 98% | KP866982.1 | |
259.0 | 1494.4 | 27% | 1.539e-67 | 98% | KP866984.1 |
Alignments
Grapevine leafroll associated virus 3, complete genome
Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 7
Range 1: 11171 to 11503 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
259.0 bits(559) | 0.0 | 110/111(99%) | 0/111(0%) | Plus/Minus |
Query 1 TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDTFPLIFCLITSTIALSISLPPKKLSPTEKMTHNIFPFFLTNETSKAPPPKSKTANNRSSTRDLAKE*RAAAVGSLTTP 333 TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDTFPLIFCLITSTIALSISLPPKKLSPTEKMTHNIFPFFLTNETSK PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTP Subject 11171 TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDTFPLIFCLITSTIALSISLPPKKLSPTEKMTHNIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAVGSLTTP 11503
Range 2: 11171 to 11503 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
256.7 bits(554) | 0.0 | 110/111(99%) | 0/111(0%) | Minus/Plus |
Query 1 RCC*RTDSRSPLFLS*VASRRPIISGFRLWGRSFRRLIR*EEGKYIMRHLFSGR*FLGW*RY**SYCGSYQAKDQRKSV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC 333 RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR+FRRLIR*EEGKYIMRHLFSGR*FLGW*RY**SYCGSYQAKDQRKSV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC Subject 11171 RCC*RTDSRSPLFLS*VASRRPIISGFRLWGRNFRRLIR*EEGKYIMRHLFSGR*FLGW*RY**SYCGSYQAKDQRKSV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC 11503
Range 3: 11170 to 11502 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
252.6 bits(545) | 0.0 | 111/111(100%) | 0/111(0%) | Minus/Plus |
Query 2 EVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWAIISWVVEILIELLWKLSSKRSKEKCLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV 334 EVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWAIISWVVEILIELLWKLSSKRSKEKCLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV Subject 11170 EVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWAIISWVVEILIELLWKLSSKRSKEKCLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV 11502
Range 4: 11172 to 11501 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
251.7 bits(543) | 0.0 | 110/110(100%) | 0/110(0%) | Plus/Minus |
Query 3 TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRHFSFDLLLDNFHNSSINISTTQEIIAH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCGCRFVNNT 332 TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRHFSFDLLLDNFHNSSINISTTQEIIAH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCGCRFVNNT Subject 11172 TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRHFSFDLLLDNFHNSSINISTTQEIIAH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCGCRFVNNT 11501
Range 5: 11172 to 11501 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
251.7 bits(543) | 0.0 | 109/110(99%) | 0/110(0%) | Minus/Plus |
Query 3 GVVNEPTAAALYSLAKSRVEDLLLAVFDFGGGAFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKVSDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG 332 GVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG FDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKVSDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG Subject 11172 GVVNEPTAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKVSDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG 11501
Range 6: 11170 to 11346 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
130.7 bits(279) | 0.0 | 58/59(98%) | 0/59(0%) | Plus/Minus |
Query 158 HPRNYRPLKR*RIIYFPSS*RMRRRKLLPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL 334 HPRNYRPLKR*RIIYFPSS*RMRRRK LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL Subject 11170 HPRNYRPLKR*RIIYFPSS*RMRRRKFLPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL 11346
Grapevine leafroll associated virus 3 isolate DOB 11 heat shock protein 70 like protein (HSP70) gene, partial cds
Sequence ID: KP866979.1 Length: 1140 Number of Matches: 7
Range 1: 229 to 561 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
259.0 bits(559) | 0.0 | 110/111(99%) | 0/111(0%) | Plus/Minus |
Query 1 TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDTFPLIFCLITSTIALSISLPPKKLSPTEKMTHNIFPFFLTNETSKAPPPKSKTANNRSSTRDLAKE*RAAAVGSLTTP 333 TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDTFPLIFCLITSTIALSISLPPKKLSPTEKMTHNIFPFFLTNETSK PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTP Subject 229 TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDTFPLIFCLITSTIALSISLPPKKLSPTEKMTHNIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAVGSLTTP 561
Range 2: 230 to 559 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
251.7 bits(543) | 0.0 | 109/110(99%) | 0/110(0%) | Minus/Plus |
Query 3 GVVNEPTAAALYSLAKSRVEDLLLAVFDFGGGAFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKVSDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG 332 GVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG FDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKVSDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG Subject 230 GVVNEPTAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKVSDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG 559
Range 3: 229 to 561 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
246.2 bits(531) | 0.0 | 106/111(95%) | 0/111(0%) | Minus/Plus |
Query 1 RCC*RTDSRSPLFLS*VASRRPIISGFRLWGRSFRRLIR*EEGKYIMRHLFSGR*FLGW*RY**SYCGSYQAKDQRKSV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC 333 RCC*R D RSPLFLS*VASRRPIISGF WGR FRRLIR*EEGKYIMRHLFSGR*FLGW*RY**SYCGSYQAKDQRKSV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC Subject 229 RCC*RADGRSPLFLS*VASRRPIISGF*FWGRDFRRLIR*EEGKYIMRHLFSGR*FLGW*RY**SYCGSYQAKDQRKSV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC 561
Range 4: 228 to 560 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
239.8 bits(517) | 0.0 | 106/111(95%) | 0/111(0%) | Minus/Plus |
Query 2 EVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWAIISWVVEILIELLWKLSSKRSKEKCLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV 334 EVLLT+R+PQPSIP*LSRE*KTYY*RF LGE LSTSHSLRRREIYYASSFQWAIISWVVEILIELLWKLSSKRSKEKCLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV Subject 228 EVLLTSRRPQPSIP*LSRE*KTYY*RFLILGEGLSTSHSLRRREIYYASSFQWAIISWVVEILIELLWKLSSKRSKEKCLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV 560
Range 5: 230 to 559 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
238.9 bits(515) | 0.0 | 105/110(95%) | 0/110(0%) | Plus/Minus |
Query 3 TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRHFSFDLLLDNFHNSSINISTTQEIIAH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCGCRFVNNT 332 TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRHFSFDLLLDNFHNSSINISTTQEIIAH*KDDA*YISLLLNE*DVES SPK++NR***VFYSRLS*GIEGCG R VNNT Subject 230 TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRHFSFDLLLDNFHNSSINISTTQEIIAH*KDDA*YISLLLNE*DVESPSPKIKNR***VFYSRLS*GIEGCGRRLVNNT 559
Range 6: 228 to 404 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
121.6 bits(259) | 0.0 | 54/59(92%) | 0/59(0%) | Plus/Minus |
Query 158 HPRNYRPLKR*RIIYFPSS*RMRRRKLLPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL 334 HPRNYRPLKR*RIIYFPSS*RMRRRK LPQ++KPLIIGLLLAT*LRNRGLR S R*QHL Subject 228 HPRNYRPLKR*RIIYFPSS*RMRRRKSLPQNQKPLIIGLLLAT*LRNRGLRPSAR*QHL 404
Grapevine leafroll associated virus 3 isolate DOB 115 heat shock protein 70 like protein (HSP70) gene, partial cds
Sequence ID: KP866981.1 Length: 1140 Number of Matches: 7
Range 1: 229 to 561 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
259.0 bits(559) | 0.0 | 110/111(99%) | 0/111(0%) | Plus/Minus |
Query 1 TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDTFPLIFCLITSTIALSISLPPKKLSPTEKMTHNIFPFFLTNETSKAPPPKSKTANNRSSTRDLAKE*RAAAVGSLTTP 333 TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDTFPLIFCLITSTIALSISLPPKKLSPTEKMTHNIFPFFLTNETSK PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTP Subject 229 TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDTFPLIFCLITSTIALSISLPPKKLSPTEKMTHNIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAVGSLTTP 561
Range 2: 229 to 561 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
256.7 bits(554) | 0.0 | 110/111(99%) | 0/111(0%) | Minus/Plus |
Query 1 RCC*RTDSRSPLFLS*VASRRPIISGFRLWGRSFRRLIR*EEGKYIMRHLFSGR*FLGW*RY**SYCGSYQAKDQRKSV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC 333 RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR+FRRLIR*EEGKYIMRHLFSGR*FLGW*RY**SYCGSYQAKDQRKSV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC Subject 229 RCC*RTDSRSPLFLS*VASRRPIISGFRLWGRNFRRLIR*EEGKYIMRHLFSGR*FLGW*RY**SYCGSYQAKDQRKSV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC 561
Range 3: 228 to 560 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
252.6 bits(545) | 0.0 | 111/111(100%) | 0/111(0%) | Minus/Plus |
Query 2 EVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWAIISWVVEILIELLWKLSSKRSKEKCLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV 334 EVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWAIISWVVEILIELLWKLSSKRSKEKCLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV Subject 228 EVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWAIISWVVEILIELLWKLSSKRSKEKCLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV 560
Range 4: 230 to 559 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
251.7 bits(543) | 0.0 | 109/110(99%) | 0/110(0%) | Minus/Plus |
Query 3 GVVNEPTAAALYSLAKSRVEDLLLAVFDFGGGAFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKVSDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG 332 GVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG FDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKVSDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG Subject 230 GVVNEPTAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKVSDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG 559
Range 5: 230 to 559 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
251.7 bits(543) | 0.0 | 110/110(100%) | 0/110(0%) | Plus/Minus |
Query 3 TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRHFSFDLLLDNFHNSSINISTTQEIIAH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCGCRFVNNT 332 TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRHFSFDLLLDNFHNSSINISTTQEIIAH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCGCRFVNNT Subject 230 TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRHFSFDLLLDNFHNSSINISTTQEIIAH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCGCRFVNNT 559
Range 6: 228 to 404 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
130.7 bits(279) | 0.0 | 58/59(98%) | 0/59(0%) | Plus/Minus |
Query 158 HPRNYRPLKR*RIIYFPSS*RMRRRKLLPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL 334 HPRNYRPLKR*RIIYFPSS*RMRRRK LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL Subject 228 HPRNYRPLKR*RIIYFPSS*RMRRRKFLPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL 404
Grapevine leafroll associated virus 3 isolate DOB 116 heat shock protein 70 like protein (HSP70) gene, partial cds
Sequence ID: KP866982.1 Length: 1140 Number of Matches: 7
Range 1: 229 to 561 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
259.0 bits(559) | 0.0 | 110/111(99%) | 0/111(0%) | Plus/Minus |
Query 1 TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDTFPLIFCLITSTIALSISLPPKKLSPTEKMTHNIFPFFLTNETSKAPPPKSKTANNRSSTRDLAKE*RAAAVGSLTTP 333 TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDTFPLIFCLITSTIALSISLPPKKLSPTEKMTHNIFPFFLTNETSK PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTP Subject 229 TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDTFPLIFCLITSTIALSISLPPKKLSPTEKMTHNIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAVGSLTTP 561
Range 2: 229 to 561 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
256.7 bits(554) | 0.0 | 110/111(99%) | 0/111(0%) | Minus/Plus |
Query 1 RCC*RTDSRSPLFLS*VASRRPIISGFRLWGRSFRRLIR*EEGKYIMRHLFSGR*FLGW*RY**SYCGSYQAKDQRKSV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC 333 RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR+FRRLIR*EEGKYIMRHLFSGR*FLGW*RY**SYCGSYQAKDQRKSV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC Subject 229 RCC*RTDSRSPLFLS*VASRRPIISGFRLWGRNFRRLIR*EEGKYIMRHLFSGR*FLGW*RY**SYCGSYQAKDQRKSV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC 561
Range 3: 228 to 560 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
252.6 bits(545) | 0.0 | 111/111(100%) | 0/111(0%) | Minus/Plus |
Query 2 EVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWAIISWVVEILIELLWKLSSKRSKEKCLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV 334 EVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWAIISWVVEILIELLWKLSSKRSKEKCLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV Subject 228 EVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWAIISWVVEILIELLWKLSSKRSKEKCLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV 560
Range 4: 230 to 559 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
251.7 bits(543) | 0.0 | 109/110(99%) | 0/110(0%) | Minus/Plus |
Query 3 GVVNEPTAAALYSLAKSRVEDLLLAVFDFGGGAFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKVSDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG 332 GVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG FDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKVSDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG Subject 230 GVVNEPTAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKVSDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG 559
Range 5: 230 to 559 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
251.7 bits(543) | 0.0 | 110/110(100%) | 0/110(0%) | Plus/Minus |
Query 3 TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRHFSFDLLLDNFHNSSINISTTQEIIAH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCGCRFVNNT 332 TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRHFSFDLLLDNFHNSSINISTTQEIIAH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCGCRFVNNT Subject 230 TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRHFSFDLLLDNFHNSSINISTTQEIIAH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCGCRFVNNT 559
Range 6: 228 to 404 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
130.7 bits(279) | 0.0 | 58/59(98%) | 0/59(0%) | Plus/Minus |
Query 158 HPRNYRPLKR*RIIYFPSS*RMRRRKLLPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL 334 HPRNYRPLKR*RIIYFPSS*RMRRRK LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL Subject 228 HPRNYRPLKR*RIIYFPSS*RMRRRKFLPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL 404
Grapevine leafroll associated virus 3 isolate DOB 20 heat shock protein 70 like protein (HSP70) gene, partial cds
Sequence ID: KP866984.1 Length: 1140 Number of Matches: 7
Range 1: 229 to 561 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
259.0 bits(559) | 0.0 | 110/111(99%) | 0/111(0%) | Plus/Minus |
Query 1 TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDTFPLIFCLITSTIALSISLPPKKLSPTEKMTHNIFPFFLTNETSKAPPPKSKTANNRSSTRDLAKE*RAAAVGSLTTP 333 TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDTFPLIFCLITSTIALSISLPPKKLSPTEKMTHNIFPFFLTNETSK PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTP Subject 229 TPPSTGIRCCVIALLLDKSSFIEDTNIPNLASDTFPLIFCLITSTIALSISLPPKKLSPTEKMTHNIFPFFLTNETSKVPPPKSKTANNRSSTRDLAKE*RAAAVGSLTTP 561
Range 2: 229 to 561 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
256.7 bits(554) | 0.0 | 110/111(99%) | 0/111(0%) | Minus/Plus |
Query 1 RCC*RTDSRSPLFLS*VASRRPIISGFRLWGRSFRRLIR*EEGKYIMRHLFSGR*FLGW*RY**SYCGSYQAKDQRKSV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC 333 RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR+FRRLIR*EEGKYIMRHLFSGR*FLGW*RY**SYCGSYQAKDQRKSV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC Subject 229 RCC*RTDSRSPLFLS*VASRRPIISGFRLWGRNFRRLIR*EEGKYIMRHLFSGR*FLGW*RY**SYCGSYQAKDQRKSV*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGC 561
Range 3: 228 to 560 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
252.6 bits(545) | 0.0 | 111/111(100%) | 0/111(0%) | Minus/Plus |
Query 2 EVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWAIISWVVEILIELLWKLSSKRSKEKCLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV 334 EVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWAIISWVVEILIELLWKLSSKRSKEKCLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV Subject 228 EVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGEELSTSHSLRRREIYYASSFQWAIISWVVEILIELLWKLSSKRSKEKCLMPS*GYSYPR*RKTCLTITL*RNTLSP*KGV 560
Range 4: 230 to 559 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
251.7 bits(543) | 0.0 | 109/110(99%) | 0/110(0%) | Minus/Plus |
Query 3 GVVNEPTAAALYSLAKSRVEDLLLAVFDFGGGAFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKVSDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG 332 GVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG FDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKVSDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG Subject 230 GVVNEPTAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKVSDAKLGIFVSSMKEDLSNNNAITQHLIPVEGG 559
Range 5: 230 to 559 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
251.7 bits(543) | 0.0 | 110/110(100%) | 0/110(0%) | Plus/Minus |
Query 3 TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRHFSFDLLLDNFHNSSINISTTQEIIAH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCGCRFVNNT 332 TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRHFSFDLLLDNFHNSSINISTTQEIIAH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCGCRFVNNT Subject 230 TPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIRHFSFDLLLDNFHNSSINISTTQEIIAH*KDDA*YISLLLNE*DVESSSPKVENR***VFYSRLS*GIEGCGCRFVNNT 559
Range 6: 228 to 404 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
130.7 bits(279) | 0.0 | 58/59(98%) | 0/59(0%) | Plus/Minus |
Query 158 HPRNYRPLKR*RIIYFPSS*RMRRRKLLPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL 334 HPRNYRPLKR*RIIYFPSS*RMRRRK LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL Subject 228 HPRNYRPLKR*RIIYFPSS*RMRRRKFLPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL 404
Nucleotide Sequence (503 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
386.9 | 2223.4 | 30% | 9.911e-106 | 99% | KM058745.1 | |
301.2 | 880.5 | 24% | 6.164e-80 | 40% | JQ655295.1 | |
301.2 | 864.5 | 24% | 6.164e-80 | 37% | JQ655296.1 | |
300.3 | 771.8 | 23% | 1.163e-79 | 32% | HQ130301.1 | |
300.3 | 771.8 | 23% | 1.163e-79 | 32% | HQ130303.1 |
Alignments
Grapevine leafroll associated virus 3 isolate GH24, complete genome
Sequence ID: KM058745.1 Length: 18493 Number of Matches: 7
Range 1: 15092 to 15586 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
386.9 bits(838) | 0.0 | 164/165(99%) | 0/165(0%) | Minus/Plus |
Query 9 VSSSFMLVNSVGDYFECGLCHNKPYVGREVVFARKYIGGRGIEVTTGKNYTSNNWNESSYVINVTIKNGIARTVVNSSYTQTDVTGLPKDFNRIYKITKIVSVDSNLYPGCFSASKLDVMNIRSVSIQGKTIYFRDVLLKPLKKSFLALRETALGIDDSSLLRSS 503 VSSSFMLVNS GDYFECGLCHNKPYVGREVVFARKYIGGRGIEVTTGKNYTSNNWNESSYVINVTIKNGIARTVVNSSYTQTDVTGLPKDFNRIYKITKIVSVDSNLYPGCFSASKLDVMNIRSVSIQGKTIYFRDVLLKPLKKSFLALRETALGIDDSSLLRSS Subject 15092 VSSSFMLVNSEGDYFECGLCHNKPYVGREVVFARKYIGGRGIEVTTGKNYTSNNWNESSYVINVTIKNGIARTVVNSSYTQTDVTGLPKDFNRIYKITKIVSVDSNLYPGCFSASKLDVMNIRSVSIQGKTIYFRDVLLKPLKKSFLALRETALGIDDSSLLRSS 15586
Range 2: 15092 to 15586 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
382.3 bits(828) | 0.0 | 164/165(99%) | 0/165(0%) | Plus/Minus |
Query 9 TTSQQ**VVYT*SRFP*G*ETFLQRL**HVSKVYRLALNRDGPYIHHVQFTCRKTSWVQVRIN*HYFCYFVYSIKILRQSCYVGLSIR*INHGSRYPVLYSHIDYIRRLVPIV*GVILPRGDFYSSTSDIFPSKHHFSPHIRFVVA*TAFKIVAYTINEHKRR*Y 503 TTSQQ**VVYT*SRFP*G*ETFLQRL**HVSKVYRLALNRDGPYIHHVQFTCRKTSWVQVRIN*HYFCYFVYSIKILRQSCYVGLSIR*INHGSRYPVLYSHIDYIRRLVPIV*GVILPRGDFYSSTSDIFPSKHHFSPHIRFVVA*TAFKIVA+TINEHKRR*Y Subject 15092 TTSQQ**VVYT*SRFP*G*ETFLQRL**HVSKVYRLALNRDGPYIHHVQFTCRKTSWVQVRIN*HYFCYFVYSIKILRQSCYVGLSIR*INHGSRYPVLYSHIDYIRRLVPIV*GVILPRGDFYSSTSDIFPSKHHFSPHIRFVVA*TAFKIVAFTINEHKRR*Y 15586
Range 3: 15093 to 15587 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
371.8 bits(805) | 0.0 | 164/165(99%) | 0/165(0%) | Minus/Plus |
Query 8 YHRRLCSLIV*ATILNAVYATTNLMWGEKWCLLGNISEVEE*KSPRGRITPQTIGTSRRM*SM*L*RTG*REPWLIHLILRPT*QDCLRILIEYTK*QK*CQLIRTCTQDVFRQVNWT**I*GPSLFKARRYTLETCY*SR*RKVS*P*GKRL*V*TTHHCCEVV 502 YHRRLCSLIV ATILNAVYATTNLMWGEKWCLLGNISEVEE*KSPRGRITPQTIGTSRRM*SM*L*RTG*REPWLIHLILRPT*QDCLRILIEYTK*QK*CQLIRTCTQDVFRQVNWT**I*GPSLFKARRYTLETCY*SR*RKVS*P*GKRL*V*TTHHCCEVV Subject 15093 YHRRLCSLIVKATILNAVYATTNLMWGEKWCLLGNISEVEE*KSPRGRITPQTIGTSRRM*SM*L*RTG*REPWLIHLILRPT*QDCLRILIEYTK*QK*CQLIRTCTQDVFRQVNWT**I*GPSLFKARRYTLETCY*SR*RKVS*P*GKRL*V*TTHHCCEVV 15587
Range 4: 15094 to 15585 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
370.8 bits(803) | 0.0 | 163/164(99%) | 0/164(0%) | Plus/Minus |
Query 10 LLRNNDESSIPKAVSLKARKLFFSGFNSTSLKYIVLP*IETDLIFITSNLLAEKHPGYRFESTDTIFVILYILLKSLGSPVTSV*V*DELTTVRAIPFFIVTLITYDDSFQLFEV*FFPVVTSIPLPPIYFLANTTSLPT*GLLWHKPHSK*SPTLLTSINDDD 501 LLRNNDESSIPKAVSLKARKLFFSGFNSTSLKYIVLP*IETDLIFITSNLLAEKHPGYRFESTDTIFVILYILLKSLGSPVTSV*V*DELTTVRAIPFFIVTLITYDDSFQLFEV*FFPVVTSIPLPPIYFLANTTSLPT*GLLWHKPHSK*SP+LLTSINDDD Subject 15094 LLRNNDESSIPKAVSLKARKLFFSGFNSTSLKYIVLP*IETDLIFITSNLLAEKHPGYRFESTDTIFVILYILLKSLGSPVTSV*V*DELTTVRAIPFFIVTLITYDDSFQLFEV*FFPVVTSIPLPPIYFLANTTSLPT*GLLWHKPHSK*SPSLLTSINDDD 15585
Range 5: 15094 to 15585 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
366.7 bits(794) | 0.0 | 163/164(99%) | 0/164(0%) | Minus/Plus |
Query 10 IIVVYAR**CRRLF*MRFMPQQTLCGERSGVC*EIYRR*RNRSHHGEELHLKQLERVVVCNQCDYKERDSANRG*FILYSDRRNRTA*GF**NIQNNKNSVS*FEPVPRMFFGK*IGRDEYKVRLYSRQDDIL*RRAIKAAEEKFPSLKGNGFRYRRLIIVAK* 501 IIVVYAR** RRLF*MRFMPQQTLCGERSGVC*EIYRR*RNRSHHGEELHLKQLERVVVCNQCDYKERDSANRG*FILYSDRRNRTA*GF**NIQNNKNSVS*FEPVPRMFFGK*IGRDEYKVRLYSRQDDIL*RRAIKAAEEKFPSLKGNGFRYRRLIIVAK* Subject 15094 IIVVYAR***RRLF*MRFMPQQTLCGERSGVC*EIYRR*RNRSHHGEELHLKQLERVVVCNQCDYKERDSANRG*FILYSDRRNRTA*GF**NIQNNKNSVS*FEPVPRMFFGK*IGRDEYKVRLYSRQDDIL*RRAIKAAEEKFPSLKGNGFRYRRLIIVAK* 15585
Range 6: 15303 to 15584 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
213.2 bits(459) | 0.0 | 94/94(100%) | 0/94(0%) | Plus/Minus |
Query 11 YFATMMSRLYLKPFPLRLGNFSSAALIARL*SISSCLE*RRTLYSSRPIYLPKNILGTGSNQLTLFLLFCIFY*NP*AVLLRRSEYKMN*PRFA 292 YFATMMSRLYLKPFPLRLGNFSSAALIARL*SISSCLE*RRTLYSSRPIYLPKNILGTGSNQLTLFLLFCIFY*NP*AVLLRRSEYKMN*PRFA Subject 15303 YFATMMSRLYLKPFPLRLGNFSSAALIARL*SISSCLE*RRTLYSSRPIYLPKNILGTGSNQLTLFLLFCIFY*NP*AVLLRRSEYKMN*PRFA 15584
Range 7: 15093 to 15254 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
131.7 bits(281) | 0.0 | 54/54(100%) | 0/54(0%) | Plus/Minus |
Query 341 NCLRCNSSPW*LLFLYLRYIS*QTPLLSPHKVCCGINRIQNSRLHY*RA*TTMI 502 NCLRCNSSPW*LLFLYLRYIS*QTPLLSPHKVCCGINRIQNSRLHY*RA*TTMI Subject 15093 NCLRCNSSPW*LLFLYLRYIS*QTPLLSPHKVCCGINRIQNSRLHY*RA*TTMI 15254
Grapevine leafroll associated virus 3 isolate GH11, complete genome
Sequence ID: JQ655295.1 Length: 18671 Number of Matches: 8
Range 1: 15291 to 15776 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
301.2 bits(651) | 0.0 | 119/162(73%) | 0/162(0%) | Minus/Plus |
Query 18 VSSSFMLVNSVGDYFECGLCHNKPYVGREVVFARKYIGGRGIEVTTGKNYTSNNWNESSYVINVTIKNGIARTVVNSSYTQTDVTGLPKDFNRIYKITKIVSVDSNLYPGCFSASKLDVMNIRSVSIQGKTIYFRDVLLKPLKKSFLALRETALGIDDSSLL 503 VSSSFML+N+ GDY+ECG+CHNKPY+GREV+FA+KYI +GIE+TTGKNYTSNNWNESSY+I V I NG+A+T VNSSYTQTDVTGLPKD+ RIYKITKIVSVD NLYPGCFSA+KL+VM+IRS+ +QG+ I FR ++LKP++KSFLA E + +DDSSLL Subject 15291 VSSSFMLMNARGDYYECGVCHNKPYLGREVIFAKKYINKQGIEITTGKNYTSNNWNESSYLIRVEINNGLAQTTVNSSYTQTDVTGLPKDWTRIYKITKIVSVDINLYPGCFSAAKLNVMSIRSIFLQGRDIDFRKIILKPMRKSFLARLEDVMSVDDSSLL 15776
Range 2: 15293 to 15775 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
196.3 bits(422) | 0.0 | 102/161(63%) | 0/161(0%) | Plus/Minus |
Query 19 NNDESSIPKAVSLKARKLFFSGFNSTSLKYIVLP*IETDLIFITSNLLAEKHPGYRFESTDTIFVILYILLKSLGSPVTSV*V*DELTTVRAIPFFIVTLITYDDSFQLFEV*FFPVVTSIPLPPIYFLANTTSLPT*GLLWHKPHSK*SPTLLTSINDDD 501 +N+ESS S ARK F GFN LK I LP + DLI IT NL AEK PG RF ST+TI VILYI ++SLG+PVTSV*V*DELT V A P I TLI YDDSFQL +V*F PVV SIP IYFLA TSLP GLL H PHS *SP SINDD+ Subject 15293 SNEESSTLITSSSLARKDFLIGFNIIFLKSISLPCKKIDLIDITFNLAAEKQPG*RFISTETILVILYIRVQSLGNPVTSV*V*DELTVV*ANPLLISTLIKYDDSFQLLDV*FLPVVISIPCLLIYFLAKITSLPKYGLL*HTPHS**SPLAFISINDDE 15775
Range 3: 15297 to 15728 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
119.7 bits(255) | 0.0 | 63/144(44%) | 0/144(0%) | Plus/Minus |
Query 66 ETFLQRL**HVSKVYRLALNRDGPYIHHVQFTCRKTSWVQVRIN*HYFCYFVYSIKILRQSCYVGLSIR*INHGSRYPVLYSHIDYIRRLVPIV*GVILPRGDFYSSTSDIFPSKHHFSPHIRFVVA*TAFKIVAYTINEHKRR 497 E F R * ++SKVY AL + PY H+VQF+ RKT+ V++ I *+Y Y +Y+ +LRQ C + LS+ *I+ V+ H + IRRL+PIV V+L + + DI SK++F P IRFVV AF +V I+ HKRR Subject 15297 ERFPHRF*YNLSKVYISAL*ENRPYRHYVQFSRRKTARVEIYIY*NYLSYLIYTSPVLRQPCDICLSVG*IDSSLSQSVVDFHSN*IRRLIPIVGRVVLTCRNLDTLLIDILLSKNNFPPQIRFVVTHAAFVVVTPRIH*HKRR 15728
Range 4: 15338 to 15772 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
97.3 bits(206) | 0.0 | 62/145(43%) | 0/145(0%) | Minus/Plus |
Query 22 MRFMPQQTLCGERSGVC*EIYRR*RNRSHHGEELHLKQLERVVVCNQCDYKERDSANRG*FILYSDRRNRTA*GF**NIQNNKNSVS*FEPVPRMFFGK*IGRDEYKVRLYSRQDDIL*RRAIKAAEEKFPSLKGNGFRYRRLII 456 MR + QQT+ GE S C*E+Y+ R R + ELH++QLE VVV N ++R +N FIL+SDR +R A*G I +N +S S ++ +P +FF *I R+ YKV +RQ L*+ IK EE FP RRL + Subject 15338 MRRVSQQTVFGEGSYFC*EVYQ*ARYRDYDR*ELHVQQLE*VVVFN*SGNQQRIGSNYCQFILHSDRCHRVA*GLDSYI*DN*DSFSRYKSLPGLFFCG*IERNVYKVDFLTRQRYRL*KDYIKTDEEIFPC*TRRRNERRRLFV 15772
Range 5: 15517 to 15774 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
46.0 bits(94) | 0.0 | 37/86(43%) | 0/86(0%) | Minus/Plus |
Query 20 IHLILRPT*QDCLRILIEYTK*QK*CQLIRTCTQDVFRQVNWT**I*GPSLFKARRYTLETCY*SR*RKVS*P*GKRL*V*TTHHC 277 IH LR Q CLR + Y +* +* Q I T+ VF ++N T* +*G +KA TLE Y*+R* +S K * *TT C Subject 15517 IHPTLRQMSQGCLRTGLVYIR*LR*FQ*I*ISTRAVFLRLN*T*CL*GRFSYKAEI*TLERLY*NR*GNLSLLD*KT**A*TTLRC 15774
Range 6: 15292 to 15474 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
44.6 bits(91) | 0.0 | 26/61(43%) | 0/61(0%) | Minus/Plus |
Query 320 YHRRLCSLIV*ATILNAVYATTNLMWGEKWCLLGNISEVEE*KSPRGRITPQTIGTSRRM* 502 + RRLC + T NA TTN +WG K LL +IS + + + R T TIG SRR+* Subject 15292 FRRRLC**MRGVTTTNAACVTTNRIWGGKLFLLRSISISKVSRLRQVRTTRPTIGMSRRI* 15474
Range 7: 15298 to 15453 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
39.6 bits(80) | 0.0 | 23/52(44%) | 0/52(0%) | Plus/Minus |
Query 341 NCLRCNSSPW*LLFLYLRYIS*QTPLLSPHKVCCGINRIQNSRLHY*RA*TT 496 NC C+S * +L Y S*Q L SP+ VCC RI++S + A*TT Subject 15298 NCWTCSSYLS*SRYLAY*YTS*QK*LPSPNTVCCDTRRIRSSHPSHSLA*TT 15453
Range 8: 15505 to 15729 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
35.9 bits(72) | 0.0 | 30/75(40%) | 0/75(0%) | Plus/Minus |
Query 65 GNFSSAALIARL*SISSCLE*RRTLYSSRPIYLPKNILGTGSNQLTLFLLFCIFY*NP*AVLLRRSEYKMN*PRF 289 G SS+ LI *S+ CL + TL + R I KN G L L L I+ +P*A L SE +MN* F Subject 15505 GKISSSVLI*SF*SLYLCLVRKSTL*TLRSI*PQKNSPGRDLYLLKLS*LSYIYESSP*ATL*HLSECRMN*Q*F 15729
Grapevine leafroll associated virus 3 isolate GH30, complete genome
Sequence ID: JQ655296.1 Length: 18576 Number of Matches: 8
Range 1: 15196 to 15681 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
301.2 bits(651) | 0.0 | 119/162(73%) | 0/162(0%) | Minus/Plus |
Query 18 VSSSFMLVNSVGDYFECGLCHNKPYVGREVVFARKYIGGRGIEVTTGKNYTSNNWNESSYVINVTIKNGIARTVVNSSYTQTDVTGLPKDFNRIYKITKIVSVDSNLYPGCFSASKLDVMNIRSVSIQGKTIYFRDVLLKPLKKSFLALRETALGIDDSSLL 503 VSSSFML+N+ GDY+ECG+CHNKPY+GREV+FA+KYI +GIE+TTGKNYTSNNWNESSY+I V I NG+A+T VNSSYTQTDVTGLPKD+ RIYKITKIVSVD NLYPGCFSA+KL+VM+IRS+ +QG+ I FR ++LKP++KSFLA E + +DDSSLL Subject 15196 VSSSFMLMNARGDYYECGVCHNKPYLGREVIFAKKYINKQGIEITTGKNYTSNNWNESSYLIKVEINNGLAQTTVNSSYTQTDVTGLPKDWTRIYKITKIVSVDINLYPGCFSAAKLNVMSIRSIFLQGRDIDFRKIILKPMRKSFLARLEDVMSVDDSSLL 15681
Range 2: 15198 to 15680 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
196.3 bits(422) | 0.0 | 102/161(63%) | 0/161(0%) | Plus/Minus |
Query 19 NNDESSIPKAVSLKARKLFFSGFNSTSLKYIVLP*IETDLIFITSNLLAEKHPGYRFESTDTIFVILYILLKSLGSPVTSV*V*DELTTVRAIPFFIVTLITYDDSFQLFEV*FFPVVTSIPLPPIYFLANTTSLPT*GLLWHKPHSK*SPTLLTSINDDD 501 +N+ESS S ARK F GFN LK I LP + DLI IT NL AEK PG RF ST+TI VILYI ++SLG+PVTSV*V*DELT V A P I TLI YDDSFQL +V*F PVV SIP IYFLA TSLP GLL H PHS *SP SINDD+ Subject 15198 SNEESSTLITSSSLARKDFLIGFNIIFLKSISLPCKKIDLIDITFNLAAEKQPG*RFISTETILVILYIRVQSLGNPVTSV*V*DELTVV*ANPLLISTLIKYDDSFQLLDV*FLPVVISIPCLLIYFLAKITSLPKYGLL*HTPHS**SPLAFISINDDE 15680
Range 3: 15202 to 15633 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
118.4 bits(252) | 0.0 | 62/144(43%) | 0/144(0%) | Plus/Minus |
Query 66 ETFLQRL**HVSKVYRLALNRDGPYIHHVQFTCRKTSWVQVRIN*HYFCYFVYSIKILRQSCYVGLSIR*INHGSRYPVLYSHIDYIRRLVPIV*GVILPRGDFYSSTSDIFPSKHHFSPHIRFVVA*TAFKIVAYTINEHKRR 497 E F R * ++SKVY AL + PY H+VQF+ RK + V++ I *+Y Y +Y+ +LRQ C + LS+ *I+ V+ H + IRRL+PIV V+L + + DI SK++F P IRFVV AF +V I+ HKRR Subject 15202 ERFPHRF*YNLSKVYISAL*ENRPYRHYVQFSRRKAARVEIYIY*NYLSYLIYTSPVLRQPCDICLSVG*IDSSLSQSVVDFHFN*IRRLIPIVGRVVLTCRNLDTLLIDILLSKNNFPPQIRFVVTHAAFVVVTPRIH*HKRR 15633
Range 4: 15243 to 15677 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
91.3 bits(193) | 0.0 | 60/145(41%) | 0/145(0%) | Minus/Plus |
Query 22 MRFMPQQTLCGERSGVC*EIYRR*RNRSHHGEELHLKQLERVVVCNQCDYKERDSANRG*FILYSDRRNRTA*GF**NIQNNKNSVS*FEPVPRMFFGK*IGRDEYKVRLYSRQDDIL*RRAIKAAEEKFPSLKGNGFRYRRLII 456 MR + QQT+ GE S C*E+Y+ R R + ELH++QLE VVV N ++R +N FIL+SDR +R A*G I +N +S S ++ +P + F *I R+ YKV + Q L*+ IK EE FP RRL + Subject 15243 MRRVSQQTVFGEGSYFC*EVYQ*ARYRDYDR*ELHVQQLE*VVVFN*SGNQQRIGSNYCQFILHSDRCHRVA*GLDSYI*DN*DSFSRYKSLPGLLFCG*IERNVYKVDFLTGQRYRL*KDYIKTDEEIFPC*TRRRNERRRLFV 15677
Range 5: 15197 to 15379 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
44.6 bits(91) | 0.0 | 26/61(43%) | 0/61(0%) | Minus/Plus |
Query 320 YHRRLCSLIV*ATILNAVYATTNLMWGEKWCLLGNISEVEE*KSPRGRITPQTIGTSRRM* 502 + RRLC + T NA TTN +WG K LL +IS + + + R T TIG SRR+* Subject 15197 FRRRLC**MRGVTTTNAACVTTNRIWGGKLFLLRSISISKVSRLRQVRTTRPTIGMSRRI* 15379
Range 6: 15422 to 15679 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
42.8 bits(87) | 0.0 | 35/86(41%) | 0/86(0%) | Minus/Plus |
Query 20 IHLILRPT*QDCLRILIEYTK*QK*CQLIRTCTQDVFRQVNWT**I*GPSLFKARRYTLETCY*SR*RKVS*P*GKRL*V*TTHHC 277 IH LR Q CLR + Y +* +* Q I T+ F ++N T* +*G ++A TLE Y*+R* +S K * *TT C Subject 15422 IHPTLRQMSQGCLRTGLVYIR*LR*FQ*I*ISTRAAFLRLN*T*CL*GRFSYRAEI*TLERLY*NR*GNLSLLD*KT**A*TTLRC 15679
Range 7: 15203 to 15358 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
39.6 bits(80) | 0.0 | 23/52(44%) | 0/52(0%) | Plus/Minus |
Query 341 NCLRCNSSPW*LLFLYLRYIS*QTPLLSPHKVCCGINRIQNSRLHY*RA*TT 496 NC C+S * +L Y S*Q L SP+ VCC RI++S + A*TT Subject 15203 NCWTCSSYLS*SRYLAY*YTS*QK*LPSPNTVCCDTRRIRSSHPSHSLA*TT 15358
Range 8: 15410 to 15634 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
30.4 bits(60) | 0.0 | 28/75(37%) | 0/75(0%) | Plus/Minus |
Query 65 GNFSSAALIARL*SISSCLE*RRTLYSSRPIYLPKNILGTGSNQLTLFLLFCIFY*NP*AVLLRRSEYKMN*PRF 289 G SS+ LI *S+ C + TL + R I K+ G L L L I+ +P*A L SE +MN* F Subject 15410 GKISSSVLI*SF*SLYLCPVRKSTL*TLRSI*PQKSSPGRDLYLLKLS*LSYIYESSP*ATL*HLSECRMN*Q*F 15634
Grapevine leafroll associated virus 3 isolate 6 102 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130301.1 Length: 4711 Number of Matches: 7
Range 1: 1361 to 1846 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
300.3 bits(649) | 0.0 | 120/162(74%) | 0/162(0%) | Minus/Plus |
Query 18 VSSSFMLVNSVGDYFECGLCHNKPYVGREVVFARKYIGGRGIEVTTGKNYTSNNWNESSYVINVTIKNGIARTVVNSSYTQTDVTGLPKDFNRIYKITKIVSVDSNLYPGCFSASKLDVMNIRSVSIQGKTIYFRDVLLKPLKKSFLALRETALGIDDSSLL 503 VSSSFML+N GDYFECG+CHNKPY+GREV+F RKYIGGRG+E+TTGKNYTSNNWNE+SYVI V + +G+A+T VNS+YTQTDV+GLPK++ RIYKITKIVSVD NLYPGCFS SKL VM IRS+S+ I+FRD+LLKPLKKSF A E L IDD+SLL Subject 1361 VSSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKYIGGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLSVSPVRIFFRDILLKPLKKSFNARIEDVLNIDDTSLL 1846
Range 2: 1363 to 1845 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
187.1 bits(402) | 0.0 | 96/161(60%) | 0/161(0%) | Plus/Minus |
Query 19 NNDESSIPKAVSLKARKLFFSGFNSTSLKYIVLP*IETDLIFITSNLLAEKHPGYRFESTDTIFVILYILLKSLGSPVTSV*V*DELTTVRAIPFFIVTLITYDDSFQLFEV*FFPVVTSIPLPPIYFLANTTSLPT*GLLWHKPHSK*SPTLLTSINDDD 501 NND SSI S+ A FF GFN SLK + ++DLI IT + +EK PG RF STDTIFVIL I ++ LG P+TSV V* ELT V A P T ITYD SFQLF+V*F PVV S PLPP+YFL TS P *GLL H PHSK*SP SINDDD Subject 1363 NNDVSSIFSTSSILALNDFFKGFNKISLKKMRTGETDSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTVVCANPSTTFTCITYDASFQLFDV*FLPVVISTPLPPMYFLQKITSRPK*GLL*HTPHSK*SPASFISINDDD 1845
Range 3: 1361 to 1729 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.0 bits(238) | 0.0 | 52/123(42%) | 0/123(0%) | Plus/Minus |
Query 135 PYIHHVQFTCRKTSWVQVRIN*HYFCYFVYSIKILRQSCYVGLSIR*INHGSRYPVLYSHIDYIRRLVPIV*GVILPRGDFYSSTSDIFPSKHHFSPHIRFVVA*TAFKIVAYTINEHKRR*Y 503 PY H+ QF +T+ V+V I HY CYFV + I + V L I IN G P+ Y H+ Y+RRLVPIV V+L GD +SS + +FP++ +F + FVV A ++++ +++HKRR*Y Subject 1361 PYTHYTQFRV*ETTRVEVLIYGHYLCYFVDTRPIFG*TTNVRLRISRINSGLC*PIDYVHLYYVRRLVPIVRRVVLTSGDLHSSPTYVFPTEDNFPS*VGFVVTHAALEVISRVVHQHKRR*Y 1729
Range 4: 1363 to 1611 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
57.9 bits(120) | 0.0 | 37/83(45%) | 0/83(0%) | Minus/Plus |
Query 253 IIVVYAR**CRRLF*MRFMPQQTLCGERSGVC*EIYRR*RNRSHHGEELHLKQLERVVVCNQCDYKERDSANRG*FILYSDRR 501 IIVVYA RL +R + QQTL S + *EI+R R+ HH ELH++QLER VV N + S + *F LY++ R Subject 1363 IIVVYADERRGRLLRVRRVSQQTLLRTGSYLL*EIHRWERSGDHHW*ELHVEQLERGVVRNTSERSRWVSTDHC*FYLYANGR 1611
Range 5: 1644 to 1844 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
38.2 bits(77) | 0.0 | 27/67(40%) | 0/67(0%) | Minus/Plus |
Query 20 TK*QK*CQLIRTCTQDVFRQVNWT**I*GPSLFKARRYTLETCY*SR*RKVS*P*GKRL*V*TTHHC 220 TK*Q+*C IRT T V + NW * +*G F +L Y*+ *R S + *+ TT C Subject 1644 TK*QR*CP*IRTSTLVVSQTRNWV*CV*GHCQFPQCASSLGISY*NL*RNRSTQESRMC*ILTTRRC 1844
Range 6: 1407 to 1610 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
42.3 bits(86) | 0.0 | 30/68(44%) | 0/68(0%) | Minus/Plus |
Query 254 NAVYATTNLMWGEKWCLLGNISEVEE*KSPRGRITPQTIGTSRRM*SM*L*RTG*REPWLIHLILRPT 457 +A TTN K +GN EE +SP R T +TIGT RR * * * G* P LI LI + T Subject 1407 SAACVTTNPT*DGKLSSVGNT*VGEEWRSPLVRTTRRTIGTRRRT*YK*T*SMG*HRPLLILLIRKRT 1610
Range 7: 1642 to 1848 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
34.1 bits(68) | 0.0 | 22/69(32%) | 0/69(0%) | Minus/Plus |
Query 16 IQNNKNSVS*FEPVPRMFFGK*IGRDEYKVRLYSRQDDIL*RRAIKAAEEKFPSLKGNGFRYRRLIIVA 222 +QNNK+SV EP+P +F G + YKV + +L* I+ EE Y R ++V+ Subject 1642 LQNNKDSVRRSEPLPWLFLRLETGCNAYKVTVSFPSAHLL*GYLIETFEEIVQRKNRGCAEY*RHVVVS 1848
Grapevine leafroll associated virus 3 isolate 6 114 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130303.1 Length: 4711 Number of Matches: 7
Range 1: 1361 to 1846 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
300.3 bits(649) | 0.0 | 120/162(74%) | 0/162(0%) | Minus/Plus |
Query 18 VSSSFMLVNSVGDYFECGLCHNKPYVGREVVFARKYIGGRGIEVTTGKNYTSNNWNESSYVINVTIKNGIARTVVNSSYTQTDVTGLPKDFNRIYKITKIVSVDSNLYPGCFSASKLDVMNIRSVSIQGKTIYFRDVLLKPLKKSFLALRETALGIDDSSLL 503 VSSSFML+N GDYFECG+CHNKPY+GREV+F RKYIGGRG+E+TTGKNYTSNNWNE+SYVI V + +G+A+T VNS+YTQTDV+GLPK++ RIYKITKIVSVD NLYPGCFS SKL VM IRS+S+ I+FRD+LLKPLKKSF A E L IDD+SLL Subject 1361 VSSSFMLMNDAGDYFECGVCHNKPYLGREVIFCRKYIGGRGVEITTGKNYTSNNWNEASYVIQVNVVDGLAQTTVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSDSKLGVMRIRSLSVSPVRIFFRDILLKPLKKSFNARIEDVLNIDDTSLL 1846
Range 2: 1363 to 1845 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
187.1 bits(402) | 0.0 | 96/161(60%) | 0/161(0%) | Plus/Minus |
Query 19 NNDESSIPKAVSLKARKLFFSGFNSTSLKYIVLP*IETDLIFITSNLLAEKHPGYRFESTDTIFVILYILLKSLGSPVTSV*V*DELTTVRAIPFFIVTLITYDDSFQLFEV*FFPVVTSIPLPPIYFLANTTSLPT*GLLWHKPHSK*SPTLLTSINDDD 501 NND SSI S+ A FF GFN SLK + ++DLI IT + +EK PG RF STDTIFVIL I ++ LG P+TSV V* ELT V A P T ITYD SFQLF+V*F PVV S PLPP+YFL TS P *GLL H PHSK*SP SINDDD Subject 1363 NNDVSSIFSTSSILALNDFFKGFNKISLKKMRTGETDSDLIRITPSFESEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTVVCANPSTTFTCITYDASFQLFDV*FLPVVISTPLPPMYFLQKITSRPK*GLL*HTPHSK*SPASFISINDDD 1845
Range 3: 1361 to 1729 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.0 bits(238) | 0.0 | 52/123(42%) | 0/123(0%) | Plus/Minus |
Query 135 PYIHHVQFTCRKTSWVQVRIN*HYFCYFVYSIKILRQSCYVGLSIR*INHGSRYPVLYSHIDYIRRLVPIV*GVILPRGDFYSSTSDIFPSKHHFSPHIRFVVA*TAFKIVAYTINEHKRR*Y 503 PY H+ QF +T+ V+V I HY CYFV + I + V L I IN G P+ Y H+ Y+RRLVPIV V+L GD +SS + +FP++ +F + FVV A ++++ +++HKRR*Y Subject 1361 PYTHYTQFRV*ETTRVEVLIYGHYLCYFVDTRPIFG*TTNVRLRISRINSGLC*PIDYVHLYYVRRLVPIVRRVVLTSGDLHSSPTYVFPTEDNFPS*VGFVVTHAALEVISRVVHQHKRR*Y 1729
Range 4: 1363 to 1611 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
57.9 bits(120) | 0.0 | 37/83(45%) | 0/83(0%) | Minus/Plus |
Query 253 IIVVYAR**CRRLF*MRFMPQQTLCGERSGVC*EIYRR*RNRSHHGEELHLKQLERVVVCNQCDYKERDSANRG*FILYSDRR 501 IIVVYA RL +R + QQTL S + *EI+R R+ HH ELH++QLER VV N + S + *F LY++ R Subject 1363 IIVVYADERRGRLLRVRRVSQQTLLRTGSYLL*EIHRWERSGDHHW*ELHVEQLERGVVRNTSERSRWVSTDHC*FYLYANGR 1611
Range 5: 1644 to 1844 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
38.2 bits(77) | 0.0 | 27/67(40%) | 0/67(0%) | Minus/Plus |
Query 20 TK*QK*CQLIRTCTQDVFRQVNWT**I*GPSLFKARRYTLETCY*SR*RKVS*P*GKRL*V*TTHHC 220 TK*Q+*C IRT T V + NW * +*G F +L Y*+ *R S + *+ TT C Subject 1644 TK*QR*CP*IRTSTLVVSQTRNWV*CV*GHCQFPQCASSLGISY*NL*RNRSTQESRMC*ILTTRRC 1844
Range 6: 1407 to 1610 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
42.3 bits(86) | 0.0 | 30/68(44%) | 0/68(0%) | Minus/Plus |
Query 254 NAVYATTNLMWGEKWCLLGNISEVEE*KSPRGRITPQTIGTSRRM*SM*L*RTG*REPWLIHLILRPT 457 +A TTN K +GN EE +SP R T +TIGT RR * * * G* P LI LI + T Subject 1407 SAACVTTNPT*DGKLSSVGNT*VGEEWRSPLVRTTRRTIGTRRRT*YK*T*SMG*HRPLLILLIRKRT 1610
Range 7: 1642 to 1848 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
34.1 bits(68) | 0.0 | 22/69(32%) | 0/69(0%) | Minus/Plus |
Query 16 IQNNKNSVS*FEPVPRMFFGK*IGRDEYKVRLYSRQDDIL*RRAIKAAEEKFPSLKGNGFRYRRLIIVA 222 +QNNK+SV EP+P +F G + YKV + +L* I+ EE Y R ++V+ Subject 1642 LQNNKDSVRRSEPLPWLFLRLETGCNAYKVTVSFPSAHLL*GYLIETFEEIVQRKNRGCAEY*RHVVVS 1848
Nucleotide Sequence (450 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
343.8 | 1964.5 | 29% | 7.689e-93 | 99% | KM058745.1 | |
343.8 | 1964.5 | 29% | 7.689e-93 | 99% | DQ314610.1 | |
340.6 | 1948.9 | 29% | 7.103e-92 | 97% | EF445656.1 | |
325.9 | 1010.3 | 35% | 1.862e-87 | 45% | JQ423939.1 | |
324.1 | 963.1 | 31% | 6.632e-87 | 42% | JQ655295.1 |
Alignments
Grapevine leafroll associated virus 3 isolate GH24, complete genome
Sequence ID: KM058745.1 Length: 18493 Number of Matches: 7
Range 1: 8388 to 8828 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
343.8 bits(744) | 0.0 | 146/147(99%) | 0/147(0%) | Minus/Plus |
Query 3 QDHDEGACAVCWIAKAEWWSKHLVR**YRSLYFAVRCT*GSRLRLCGHKRR**SYF*PAAFRRRHIGFK**FWL*CEDV*SSCSIFLL*VYGPGG*RFVFRSRPVETLREIWSVKNI*YRSFA*DFSVFCGSVEGP*SGGRYSSPLP 443 QDHDEGACAVCWIAKAEWWSKHLVR**YRSLYFAVRCT*GSRLRLCGHKRR**SYF*PAAFRRRHIGFK**FWL*CEDV*SSCSIFLL*VYGPGG*RFVFRSRPVETLREIWSVKNI*YRSFA*DFSVFCGSVEGP*SGGRYSSP P Subject 8388 QDHDEGACAVCWIAKAEWWSKHLVR**YRSLYFAVRCT*GSRLRLCGHKRR**SYF*PAAFRRRHIGFK**FWL*CEDV*SSCSIFLL*VYGPGG*RFVFRSRPVETLREIWSVKNI*YRSFA*DFSVFCGSVEGP*SGGRYSSPYP 8828
Range 2: 8384 to 8827 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
343.8 bits(744) | 0.0 | 146/148(99%) | 0/148(0%) | Plus/Minus |
Query 4 GKGLE*RPPD*GPSTDPQKTEKSHAKDLYQMFLTLQISRRVSTGRERKTNRHPPGP*T*SKNMEQLD*TSSHQSQNYHLKPMCRRLKAAG*K*DYHRRL*PHNRNLDP*VQRTAKYKERYYYLTKCLLHHSAFAIQQTAQAPSSWS*K 447 G GLE*RPPD*GPSTDPQKTEKSHAKDLYQMFLTLQISRRVSTGRERKTNRHPPGP*T*SKNMEQLD*TSSHQSQNYHLKPMCRRLKAAG*K*DYHRRL*PHNRNLDP*VQRTAKYKERYYYLTKCLLHHSAFAIQQTAQAPSSWS*+ Subject 8384 G*GLE*RPPD*GPSTDPQKTEKSHAKDLYQMFLTLQISRRVSTGRERKTNRHPPGP*T*SKNMEQLD*TSSHQSQNYHLKPMCRRLKAAG*K*DYHRRL*PHNRNLDP*VQRTAKYKERYYYLTKCLLHHSAFAIQQTAQAPSSWS*Q 8827
Range 3: 8389 to 8823 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
340.6 bits(737) | 0.0 | 145/145(100%) | 0/145(0%) | Minus/Plus |
Query 8 RTMTKELVLSVGSQRRSGGANTWLGNSIVLCTLLSVVLRGLDYDYVVISGDDSLIFSRQPLDVDTSVLSDNFGFDVKMFNQAAPYFCSKFMVQVDDGLFFVPDPLKLFVKFGASKTSDIDLLHEIFQSFVDLSKGLNREDVIQAL 442 RTMTKELVLSVGSQRRSGGANTWLGNSIVLCTLLSVVLRGLDYDYVVISGDDSLIFSRQPLDVDTSVLSDNFGFDVKMFNQAAPYFCSKFMVQVDDGLFFVPDPLKLFVKFGASKTSDIDLLHEIFQSFVDLSKGLNREDVIQAL Subject 8389 RTMTKELVLSVGSQRRSGGANTWLGNSIVLCTLLSVVLRGLDYDYVVISGDDSLIFSRQPLDVDTSVLSDNFGFDVKMFNQAAPYFCSKFMVQVDDGLFFVPDPLKLFVKFGASKTSDIDLLHEIFQSFVDLSKGLNREDVIQAL 8823
Range 4: 8384 to 8821 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
334.2 bits(723) | 0.0 | 146/146(100%) | 0/146(0%) | Minus/Plus |
Query 10 LSGP*RRSLCCLLDRKGGVVEQTLG*VIVSFFVLCCPLYLGV*ITIMWS*AAMIVLFLAGSL*TSTHRF*VIILALM*RCLIKLLHIFALSLWSRWMTVCFSFPTR*NSS*NLERQKHLI*IFCMRFFSLLWICRRALIGRTLFKP 447 LSGP*RRSLCCLLDRKGGVVEQTLG*VIVSFFVLCCPLYLGV*ITIMWS*AAMIVLFLAGSL*TSTHRF*VIILALM*RCLIKLLHIFALSLWSRWMTVCFSFPTR*NSS*NLERQKHLI*IFCMRFFSLLWICRRALIGRTLFKP Subject 8384 LSGP*RRSLCCLLDRKGGVVEQTLG*VIVSFFVLCCPLYLGV*ITIMWS*AAMIVLFLAGSL*TSTHRF*VIILALM*RCLIKLLHIFALSLWSRWMTVCFSFPTR*NSS*NLERQKHLI*IFCMRFFSLLWICRRALIGRTLFKP 8821
Range 5: 8383 to 8823 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
311.3 bits(673) | 0.0 | 145/147(99%) | 0/147(0%) | Plus/Minus |
Query 8 KGLNNVLPIKALRQIHKRLKNLMQKIYIRCF*RSKFHEEFQRVGNEKQTVIHLDHKLRAKIWSSXXXXXXXXXXXXT*NRCVDV*RLPAKNKTIIAAYDHIIVI*TPKYNGQQSTKNDTIT*PSVCSTTPPLRSNRQHKLLRHGPES 448 KGLNNVLPIKALRQIHKRLKNLMQKIYIRCF*RSKFHEEFQRVGNEKQTVIHLDHKLRAKIWSSLIKHLHIKAKIIT*NRCVDV*RLPAKNKTIIAAYDHIIVI*TPKYNGQQSTKNDTIT*PSVCSTTPPLRSNRQHKLLRHGP++ Subject 8383 KGLNNVLPIKALRQIHKRLKNLMQKIYIRCF*RSKFHEEFQRVGNEKQTVIHLDHKLRAKIWSSLIKHLHIKAKIIT*NRCVDV*RLPAKNKTIIAAYDHIIVI*TPKYNGQQSTKNDTIT*PSVCSTTPPLRSNRQHKLLRHGPDN 8823
Range 6: 8550 to 8822 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
210.9 bits(454) | 0.0 | 91/91(100%) | 0/91(0%) | Plus/Minus |
Query 9 RA*ITSSRLRPFDRSTKD*KISCKRSISDVFDAPNFTKSFNGSGTKNKPSSTWTINLEQKYGAA*LNIFTSKPKLSLKTDVSTSKGCRLKI 281 RA*ITSSRLRPFDRSTKD*KISCKRSISDVFDAPNFTKSFNGSGTKNKPSSTWTINLEQKYGAA*LNIFTSKPKLSLKTDVSTSKGCRLKI Subject 8550 RA*ITSSRLRPFDRSTKD*KISCKRSISDVFDAPNFTKSFNGSGTKNKPSSTWTINLEQKYGAA*LNIFTSKPKLSLKTDVSTSKGCRLKI 8822
Grapevine leafroll associated virus 3 isolate Tempr RNA dependent RNA polymerase (ORF1b) gene, partial cds
Sequence ID: DQ314610.1 Length: 1807 Number of Matches: 7
Range 1: 944 to 1387 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
343.8 bits(744) | 0.0 | 146/148(99%) | 0/148(0%) | Plus/Minus |
Query 4 GKGLE*RPPD*GPSTDPQKTEKSHAKDLYQMFLTLQISRRVSTGRERKTNRHPPGP*T*SKNMEQLD*TSSHQSQNYHLKPMCRRLKAAG*K*DYHRRL*PHNRNLDP*VQRTAKYKERYYYLTKCLLHHSAFAIQQTAQAPSSWS*K 447 G GLE*RPPD*GPSTDPQKTEKSHAKDLYQMFLTLQISRRVSTGRERKTNRHPPGP*T*SKNMEQLD*TSSHQSQNYHLKPMCRRLKAAG*K*DYHRRL*PHNRNLDP*VQRTAKYKERYYYLTKCLLHHSAFAIQQTAQAPSSWS*+ Subject 944 G*GLE*RPPD*GPSTDPQKTEKSHAKDLYQMFLTLQISRRVSTGRERKTNRHPPGP*T*SKNMEQLD*TSSHQSQNYHLKPMCRRLKAAG*K*DYHRRL*PHNRNLDP*VQRTAKYKERYYYLTKCLLHHSAFAIQQTAQAPSSWS*Q 1387
Range 2: 948 to 1388 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
343.8 bits(744) | 0.0 | 146/147(99%) | 0/147(0%) | Minus/Plus |
Query 3 QDHDEGACAVCWIAKAEWWSKHLVR**YRSLYFAVRCT*GSRLRLCGHKRR**SYF*PAAFRRRHIGFK**FWL*CEDV*SSCSIFLL*VYGPGG*RFVFRSRPVETLREIWSVKNI*YRSFA*DFSVFCGSVEGP*SGGRYSSPLP 443 QDHDEGACAVCWIAKAEWWSKHLVR**YRSLYFAVRCT*GSRLRLCGHKRR**SYF*PAAFRRRHIGFK**FWL*CEDV*SSCSIFLL*VYGPGG*RFVFRSRPVETLREIWSVKNI*YRSFA*DFSVFCGSVEGP*SGGRYSSP P Subject 948 QDHDEGACAVCWIAKAEWWSKHLVR**YRSLYFAVRCT*GSRLRLCGHKRR**SYF*PAAFRRRHIGFK**FWL*CEDV*SSCSIFLL*VYGPGG*RFVFRSRPVETLREIWSVKNI*YRSFA*DFSVFCGSVEGP*SGGRYSSPYP 1388
Range 3: 949 to 1383 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
340.6 bits(737) | 0.0 | 145/145(100%) | 0/145(0%) | Minus/Plus |
Query 8 RTMTKELVLSVGSQRRSGGANTWLGNSIVLCTLLSVVLRGLDYDYVVISGDDSLIFSRQPLDVDTSVLSDNFGFDVKMFNQAAPYFCSKFMVQVDDGLFFVPDPLKLFVKFGASKTSDIDLLHEIFQSFVDLSKGLNREDVIQAL 442 RTMTKELVLSVGSQRRSGGANTWLGNSIVLCTLLSVVLRGLDYDYVVISGDDSLIFSRQPLDVDTSVLSDNFGFDVKMFNQAAPYFCSKFMVQVDDGLFFVPDPLKLFVKFGASKTSDIDLLHEIFQSFVDLSKGLNREDVIQAL Subject 949 RTMTKELVLSVGSQRRSGGANTWLGNSIVLCTLLSVVLRGLDYDYVVISGDDSLIFSRQPLDVDTSVLSDNFGFDVKMFNQAAPYFCSKFMVQVDDGLFFVPDPLKLFVKFGASKTSDIDLLHEIFQSFVDLSKGLNREDVIQAL 1383
Range 4: 944 to 1381 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
334.2 bits(723) | 0.0 | 146/146(100%) | 0/146(0%) | Minus/Plus |
Query 10 LSGP*RRSLCCLLDRKGGVVEQTLG*VIVSFFVLCCPLYLGV*ITIMWS*AAMIVLFLAGSL*TSTHRF*VIILALM*RCLIKLLHIFALSLWSRWMTVCFSFPTR*NSS*NLERQKHLI*IFCMRFFSLLWICRRALIGRTLFKP 447 LSGP*RRSLCCLLDRKGGVVEQTLG*VIVSFFVLCCPLYLGV*ITIMWS*AAMIVLFLAGSL*TSTHRF*VIILALM*RCLIKLLHIFALSLWSRWMTVCFSFPTR*NSS*NLERQKHLI*IFCMRFFSLLWICRRALIGRTLFKP Subject 944 LSGP*RRSLCCLLDRKGGVVEQTLG*VIVSFFVLCCPLYLGV*ITIMWS*AAMIVLFLAGSL*TSTHRF*VIILALM*RCLIKLLHIFALSLWSRWMTVCFSFPTR*NSS*NLERQKHLI*IFCMRFFSLLWICRRALIGRTLFKP 1381
Range 5: 943 to 1383 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
311.3 bits(673) | 0.0 | 145/147(99%) | 0/147(0%) | Plus/Minus |
Query 8 KGLNNVLPIKALRQIHKRLKNLMQKIYIRCF*RSKFHEEFQRVGNEKQTVIHLDHKLRAKIWSSXXXXXXXXXXXXT*NRCVDV*RLPAKNKTIIAAYDHIIVI*TPKYNGQQSTKNDTIT*PSVCSTTPPLRSNRQHKLLRHGPES 448 KGLNNVLPIKALRQIHKRLKNLMQKIYIRCF*RSKFHEEFQRVGNEKQTVIHLDHKLRAKIWSSLIKHLHIKAKIIT*NRCVDV*RLPAKNKTIIAAYDHIIVI*TPKYNGQQSTKNDTIT*PSVCSTTPPLRSNRQHKLLRHGP++ Subject 943 KGLNNVLPIKALRQIHKRLKNLMQKIYIRCF*RSKFHEEFQRVGNEKQTVIHLDHKLRAKIWSSLIKHLHIKAKIIT*NRCVDV*RLPAKNKTIIAAYDHIIVI*TPKYNGQQSTKNDTIT*PSVCSTTPPLRSNRQHKLLRHGPDN 1383
Range 6: 1110 to 1382 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
210.9 bits(454) | 0.0 | 91/91(100%) | 0/91(0%) | Plus/Minus |
Query 9 RA*ITSSRLRPFDRSTKD*KISCKRSISDVFDAPNFTKSFNGSGTKNKPSSTWTINLEQKYGAA*LNIFTSKPKLSLKTDVSTSKGCRLKI 281 RA*ITSSRLRPFDRSTKD*KISCKRSISDVFDAPNFTKSFNGSGTKNKPSSTWTINLEQKYGAA*LNIFTSKPKLSLKTDVSTSKGCRLKI Subject 1110 RA*ITSSRLRPFDRSTKD*KISCKRSISDVFDAPNFTKSFNGSGTKNKPSSTWTINLEQKYGAA*LNIFTSKPKLSLKTDVSTSKGCRLKI 1382
Grapevine leafroll associated virus 3 isolate CB19 RNA polymerase gene, partial cds
Sequence ID: EF445656.1 Length: 602 Number of Matches: 7
Range 1: 135 to 569 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
340.6 bits(737) | 0.0 | 145/145(100%) | 0/145(0%) | Minus/Plus |
Query 8 RTMTKELVLSVGSQRRSGGANTWLGNSIVLCTLLSVVLRGLDYDYVVISGDDSLIFSRQPLDVDTSVLSDNFGFDVKMFNQAAPYFCSKFMVQVDDGLFFVPDPLKLFVKFGASKTSDIDLLHEIFQSFVDLSKGLNREDVIQAL 442 RTMTKELVLSVGSQRRSGGANTWLGNSIVLCTLLSVVLRGLDYDYVVISGDDSLIFSRQPLDVDTSVLSDNFGFDVKMFNQAAPYFCSKFMVQVDDGLFFVPDPLKLFVKFGASKTSDIDLLHEIFQSFVDLSKGLNREDVIQAL Subject 135 RTMTKELVLSVGSQRRSGGANTWLGNSIVLCTLLSVVLRGLDYDYVVISGDDSLIFSRQPLDVDTSVLSDNFGFDVKMFNQAAPYFCSKFMVQVDDGLFFVPDPLKLFVKFGASKTSDIDLLHEIFQSFVDLSKGLNREDVIQAL 569
Range 2: 134 to 574 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
339.7 bits(735) | 0.0 | 144/147(98%) | 0/147(0%) | Minus/Plus |
Query 3 QDHDEGACAVCWIAKAEWWSKHLVR**YRSLYFAVRCT*GSRLRLCGHKRR**SYF*PAAFRRRHIGFK**FWL*CEDV*SSCSIFLL*VYGPGG*RFVFRSRPVETLREIWSVKNI*YRSFA*DFSVFCGSVEGP*SGGRYSSPLP 443 QDHDEGACAVCWIAKAEWWSKHLVR**YRSLYFAVRCT*GSRLRLCGHKRR**SYF*PAAFRRRHIGFK**FWL CEDV*SSCSIFLL*VYGPGG*RFVFRSRPVETLREIWSV+NI*YRSFA*DFSVFCGSVEGP*SGGRYSSP P Subject 134 QDHDEGACAVCWIAKAEWWSKHLVR**YRSLYFAVRCT*GSRLRLCGHKRR**SYF*PAAFRRRHIGFK**FWLRCEDV*SSCSIFLL*VYGPGG*RFVFRSRPVETLREIWSVENI*YRSFA*DFSVFCGSVEGP*SGGRYSSPYP 574
Range 3: 130 to 573 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
339.2 bits(734) | 0.0 | 144/148(97%) | 0/148(0%) | Plus/Minus |
Query 4 GKGLE*RPPD*GPSTDPQKTEKSHAKDLYQMFLTLQISRRVSTGRERKTNRHPPGP*T*SKNMEQLD*TSSHQSQNYHLKPMCRRLKAAG*K*DYHRRL*PHNRNLDP*VQRTAKYKERYYYLTKCLLHHSAFAIQQTAQAPSSWS*K 447 G GLE*RPPD*GPSTDPQKTEKSHAKDLYQMF TLQISRRVSTGRERKTNRHPPGP*T*SKNMEQLD*TSSH+SQNYHLKPMCRRLKAAG*K*DYHRRL*PHNRNLDP*VQRTAKYKERYYYLTKCLLHHSAFAIQQTAQAPSSWS*+ Subject 130 G*GLE*RPPD*GPSTDPQKTEKSHAKDLYQMFSTLQISRRVSTGRERKTNRHPPGP*T*SKNMEQLD*TSSHRSQNYHLKPMCRRLKAAG*K*DYHRRL*PHNRNLDP*VQRTAKYKERYYYLTKCLLHHSAFAIQQTAQAPSSWS*Q 573
Range 4: 130 to 567 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
329.6 bits(713) | 0.0 | 144/146(99%) | 0/146(0%) | Minus/Plus |
Query 10 LSGP*RRSLCCLLDRKGGVVEQTLG*VIVSFFVLCCPLYLGV*ITIMWS*AAMIVLFLAGSL*TSTHRF*VIILALM*RCLIKLLHIFALSLWSRWMTVCFSFPTR*NSS*NLERQKHLI*IFCMRFFSLLWICRRALIGRTLFKP 447 LSGP*RRSLCCLLDRKGGVVEQTLG*VIVSFFVLCCPLYLGV*ITIMWS*AAMIVLFLAGSL*TSTHRF*VIILA M*RCLIKLLHIFALSLWSRWMTVCFSFPTR*NSS*NLER+KHLI*IFCMRFFSLLWICRRALIGRTLFKP Subject 130 LSGP*RRSLCCLLDRKGGVVEQTLG*VIVSFFVLCCPLYLGV*ITIMWS*AAMIVLFLAGSL*TSTHRF*VIILASM*RCLIKLLHIFALSLWSRWMTVCFSFPTR*NSS*NLERRKHLI*IFCMRFFSLLWICRRALIGRTLFKP 567
Range 5: 129 to 569 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
309.0 bits(668) | 0.0 | 143/147(97%) | 0/147(0%) | Plus/Minus |
Query 8 KGLNNVLPIKALRQIHKRLKNLMQKIYIRCF*RSKFHEEFQRVGNEKQTVIHLDHKLRAKIWSSXXXXXXXXXXXXT*NRCVDV*RLPAKNKTIIAAYDHIIVI*TPKYNGQQSTKNDTIT*PSVCSTTPPLRSNRQHKLLRHGPES 448 KGLNNVLPIKALRQIHKRLKNLMQKIYIRCF RSKFHEEFQRVGNEKQTVIHLDHKLRAKIWSSLIKHLHI+AKIIT*NRCVDV*RLPAKNKTIIAAYDHIIVI*TPKYNGQQSTKNDTIT*PSVCSTTPPLRSNRQHKLLRHGP++ Subject 129 KGLNNVLPIKALRQIHKRLKNLMQKIYIRCFRRSKFHEEFQRVGNEKQTVIHLDHKLRAKIWSSLIKHLHIEAKIIT*NRCVDV*RLPAKNKTIIAAYDHIIVI*TPKYNGQQSTKNDTIT*PSVCSTTPPLRSNRQHKLLRHGPDN 569
Range 6: 296 to 568 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
210.9 bits(454) | 0.0 | 91/91(100%) | 0/91(0%) | Plus/Minus |
Query 9 RA*ITSSRLRPFDRSTKD*KISCKRSISDVFDAPNFTKSFNGSGTKNKPSSTWTINLEQKYGAA*LNIFTSKPKLSLKTDVSTSKGCRLKI 281 RA*ITSSRLRPFDRSTKD*KISCKRSISDVFDAPNFTKSFNGSGTKNKPSSTWTINLEQKYGAA*LNIFTSKPKLSLKTDVSTSKGCRLKI Subject 296 RA*ITSSRLRPFDRSTKD*KISCKRSISDVFDAPNFTKSFNGSGTKNKPSSTWTINLEQKYGAA*LNIFTSKPKLSLKTDVSTSKGCRLKI 568
Grapevine leafroll associated virus 3 isolate LN, complete genome
Sequence ID: JQ423939.1 Length: 18563 Number of Matches: 9
Range 1: 8454 to 8888 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
325.9 bits(705) | 0.0 | 134/145(92%) | 0/145(0%) | Minus/Plus |
Query 8 RTMTKELVLSVGSQRRSGGANTWLGNSIVLCTLLSVVLRGLDYDYVVISGDDSLIFSRQPLDVDTSVLSDNFGFDVKMFNQAAPYFCSKFMVQVDDGLFFVPDPLKLFVKFGASKTSDIDLLHEIFQSFVDLSKGLNREDVIQAL 442 RTMTKELVLSVGSQRRSGGANTWLGNS++LCTLLSVVLRGLDY Y+V+SGDDSLIFSRQPLD+DTSVLSDNFGFDVK+FNQAAPYFCSKF+VQV+DGLFFVPDPLKLFVKFGASKTSDIDLLHEIFQSFVDLSKG NREDVIQ L Subject 8454 RTMTKELVLSVGSQRRSGGANTWLGNSLILCTLLSVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKVFNQAAPYFCSKFLVQVEDGLFFVPDPLKLFVKFGASKTSDIDLLHEIFQSFVDLSKGFNREDVIQEL 8888
Range 2: 8615 to 8878 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
146.8 bits(314) | 0.0 | 64/88(73%) | 0/88(0%) | Plus/Minus |
Query 18 ITSSRLRPFDRSTKD*KISCKRSISDVFDAPNFTKSFNGSGTKNKPSSTWTINLEQKYGAA*LNIFTSKPKLSLKTDVSTSKGCRLKI 281 +TSS L+PF+RSTKD* ISCKRS+S+V +APN TKS +GSGTK +PSST T NLEQK GAA LN FTSKPKLSL+TDVS S GCRL + Subject 8615 MTSSLLKPFERSTKD*NISCKRSMSEVLEAPNLTKSLSGSGTKKRPSST*TKNLEQK*GAAWLNTFTSKPKLSLRTDVSISNGCRLNM 8878
Range 3: 8453 to 8551 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.9 bits(107) | 0.0 | 21/33(64%) | 0/33(0%) | Plus/Minus |
Query 345 KVQRTILLPNQVFAPPLRLCDPTDSTSSFVMVL 443 KV + L PN V APPLRL +PTD+T+SFV+VL Subject 8453 KVHKIKLFPNHVLAPPLRLWEPTDNTNSFVIVL 8551
Range 4: 8448 to 8654 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
81.7 bits(172) | 0.0 | 37/69(54%) | 0/69(0%) | Plus/Minus |
Query 242 NRCVDV*RLPAKNKTIIAAYDHIIVI*TPKYNGQQSTKNDTIT*PSVCSTTPPLRSNRQHKLLRHGPES 448 +R +D+*RLP K + IIAA I +I*+PKY GQQ T++ TI *P V +TT PL ++ QH+LLRH P + Subject 8448 DRRIDI*RLPTKYEAIIAANYDIAII*SPKYYGQQGTQD*TIP*PRVSTTTAPLGADGQHQLLRHRPHN 8654
Range 5: 8697 to 8882 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
70.3 bits(147) | 0.0 | 32/62(52%) | 0/62(0%) | Plus/Minus |
Query 14 LNNVLPIKALRQIHKRLKNLMQKIYIRCF*RSKFHEEFQRVGNEKQTVIHLDHKLRAKIWSS 199 L++VL I+ LR+I +RLK LMQK+ + F SK +EEF+ +GN+K+T++ L+ KLR KI SS Subject 8697 LDDVLSIETLRKIDERLKYLMQKVDV*SFGSSKLNEEFKWIGNKKETILDLN*KLRTKIRSS 8882
Range 6: 8453 to 8857 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.9 bits(240) | 0.0 | 61/135(45%) | 0/135(0%) | Minus/Plus |
Query 39 QDHDEGACAVCWIAKAEWWSKHLVR**YRSLYFAVRCT*GSRLRLCGHKRR**SYF*PAAFRRRHIGFK**FWL*CEDV*SSCSIFLL*VYGPGG*RFVFRSRPVETLREIWSVKNI*YRSFA*DFSVFCGSVEG 443 +D DEG V + +A+WW H+VR *+ +Y VR T*G RL L RR** + * AA R R++G + *FW * + + SCS+FL *V+ +F SR TLR +WS +N +R FA*D S+F S EG Subject 8453 EDDDEGVGVVRRLPEAQWWC*HVVRE*FNLVYLVVRST*GIRL*LYRS*RR**PHI*SAAVRYRYVGPER*FWF*RKGIQPSCSLFLF*VFSSSRGWSLFCSRST*TLR*VWSFQNFRHRPFA*DISIFRRSFEG 8857
Range 7: 8455 to 8874 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
107.4 bits(228) | 0.0 | 70/140(50%) | 0/140(0%) | Minus/Plus |
Query 22 GP*RRSLCCLLDRKGGVVEQTLG*VIVSFFVLCCPLYLGV*ITIMWS*AAMIVLFLAGSL*TSTHRF*VIILALM*RCLIKLLHIFALSLWSRWMTVCFSFPTR*NSS*NLERQKHLI*IFCMRFFSLLWICRRALIGRT 441 G *RRS CC +G VV T G* IV V CCP YLG *I + AAMI +L GS * S R * IIL L *R KLL IF LS + V F FP NSS +LE K FCMR+F+L I RR I RT Subject 8455 GR*RRSWCCPSAPRGAVVVLTRG*GIV*SCVPCCP*YLGD*IIAIS*LAAMIASYLVGSR*ISIRRS*AIILVLT*RYSTKLLLIFVLSF*FKSRMVSFLFPIHLNSSLSLELPKLQTSTFCMRYFNLSSIFRRVSIERT 8874
Range 8: 8455 to 8721 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
76.7 bits(161) | 0.0 | 43/89(48%) | 0/89(0%) | Plus/Minus |
Query 175 T*SKNMEQLD*TSSHQSQNYHLKPMCRRLKAAG*K*DYHRRL*PHNRNLDP*VQRTAKYKERYYYLTKCLLHHSAFAIQQTAQAPSSWS 441 T*+KN EQL * Q+QNY P R L AA * * YHRR ++ NL P*V RT +Y Y LT C HH A ++T PSS S Subject 8455 T*NKNKEQLG*IPLRQNQNYRSGPTYRYLTAAD*I*GYHRR*LRYSYNLIP*VLRTTRYTRLNYSLTTC*HHHCASGSRRTTPTPSSSS 8721
Grapevine leafroll associated virus 3 isolate GH11, complete genome
Sequence ID: JQ655295.1 Length: 18671 Number of Matches: 9
Range 1: 8389 to 8823 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
324.1 bits(701) | 0.0 | 135/145(93%) | 0/145(0%) | Minus/Plus |
Query 8 RTMTKELVLSVGSQRRSGGANTWLGNSIVLCTLLSVVLRGLDYDYVVISGDDSLIFSRQPLDVDTSVLSDNFGFDVKMFNQAAPYFCSKFMVQVDDGLFFVPDPLKLFVKFGASKTSDIDLLHEIFQSFVDLSKGLNREDVIQAL 442 RTMTKELVLSVGSQRRSGGANTWLGNSIVLCTLLSVVLRGLDYDYVV+SGDDSLIFS++PLD+DT VLSDNFGFDVK+FNQAAPYFCSKF+VQVDD L+FVPDPLKLFVKFGASKTSDIDLLHEIFQSFVDLSKG NREDVIQAL Subject 8389 RTMTKELVLSVGSQRRSGGANTWLGNSIVLCTLLSVVLRGLDYDYVVVSGDDSLIFSKRPLDIDTVVLSDNFGFDVKVFNQAAPYFCSKFLVQVDDDLYFVPDPLKLFVKFGASKTSDIDLLHEIFQSFVDLSKGFNREDVIQAL 8823
Range 2: 8550 to 8822 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
145.9 bits(312) | 0.0 | 67/91(74%) | 0/91(0%) | Plus/Minus |
Query 9 RA*ITSSRLRPFDRSTKD*KISCKRSISDVFDAPNFTKSFNGSGTKNKPSSTWTINLEQKYGAA*LNIFTSKPKLSLKTDVSTSKGCRLKI 281 +A ITSS L+PFD+STKD*KISC RSISDV +APN T +F GSGTK + SST T NLEQKYGAA*LN FTSKPKLSL+T VS S G LKI Subject 8550 KACITSSLLKPFDKSTKD*KISCSRSISDVLEAPNLTNNFRGSGTKYRSSST*TKNLEQKYGAA*LNTFTSKPKLSLRTTVSISNGRLLKI 8822
Range 3: 8388 to 8486 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
55.1 bits(114) | 0.0 | 22/33(67%) | 0/33(0%) | Plus/Minus |
Query 345 KVQRTILLPNQVFAPPLRLCDPTDSTSSFVMVL 443 +V +T+L PNQV APPLRL +PTD+TSS V+VL Subject 8388 RVHKTMLFPNQVLAPPLRL*EPTDNTSSLVIVL 8486
Range 4: 8641 to 8817 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
68.0 bits(142) | 0.0 | 32/59(54%) | 0/59(0%) | Plus/Minus |
Query 14 LNNVLPIKALRQIHKRLKNLMQKIYIRCF*RSKFHEEFQRVGNEKQTVIHLDHKLRAKI 190 L N+ PIK LRQIHKRLKNL+Q+I I F + ++ QRV NE Q +I+L+ KLR +I Subject 8641 LYNIFPIKTLRQIHKRLKNLVQQIDIGRFRSPELNK*LQRVWNEIQVIIYLN*KLRTEI 8817
Range 5: 8389 to 8595 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
66.6 bits(139) | 0.0 | 34/69(49%) | 0/69(0%) | Plus/Minus |
Query 236 T*NRCVDV*RLPAKNKTIIAAYDHIIVI*TPKYNGQQSTKNDTIT*PSVCSTTPPLRSNRQHKLLRHGP 442 T*N + + R AKNK I+A D +IVI*TPKY +S +N I PS+ STT LR++ QH L H P Subject 8389 T*NHGIYIQRSLAKNKAIVATNDDVIVI*TPKYYA*KSAQNYAIPQPSIGSTTTSLRADGQH*LFGHCP 8595
Range 6: 8388 to 8816 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
105.1 bits(223) | 0.0 | 64/143(45%) | 0/143(0%) | Minus/Plus |
Query 15 QDHDEGACAVCWIAKAEWWSKHLVR**YRSLYFAVRCT*GSRLRLCGHKRR**SYF*PAAFRRRHIGFK**FWL*CEDV*SSCSIFLL*VYGPGG*RFVFRSRPVETLREIWSVKNI*YRSFA*DFSVFCGSVEGP*SGGRYS 443 +D+D+ A V +++ WWS++LV *+ ++ R T*GSRLRL R * YF* A R+ G K* F CE +*SS ++FL *V+ * VFRSRP E + + N+ YRS A DFS+FCG VEG * G Y+ Subject 8388 KDNDQRASVVRRLSET*WWSQYLVGE*HSFVHSFKRST*GSRLRLRRR*WRR*PYF*QATVGYRYRGSK*QFRFRCEGI*SSGAVFLF*VFSSSR**PVFRSRPSEVIC*VRGF*NVRYRSAARDFSIFCGFVEGF**GRCYT 8816
Range 7: 8405 to 8803 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
92.7 bits(196) | 0.0 | 56/133(42%) | 0/133(0%) | Plus/Minus |
Query 28 PD*GPSTDPQKTEKSHAKDLYQMFLTLQISRRVSTGRERKTNRHPPGP*T*SKNMEQLD*TSSHQSQNYHLKPMCRRLKAAG*K*DYHRRL*PHNRNLDP*VQRTAKYKERYYYLTKCLLHHSAFAIQQTAQA 426 P * PST+PQK EKS A D Y+ F + + S G ER T H T*++N LD* SH+++N HL+P A *K* Y R NRNLDP*V R + + Y TK LHH ++T A Subject 8405 PY*NPSTNPQKIEKSRAADRYRTF*KPRT*QITSEGLERNTGHHLLELKT*NRNTAPLD*IPSHRNRNCHLEPRYLYPTVAC*K*GYRRH*RRRNRNLDP*VLRLKECTKLCYSPTKYWLHHYVSESRRTTLA 8803
Range 8: 8588 to 8818 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
66.1 bits(138) | 0.0 | 37/77(48%) | 0/77(0%) | Minus/Plus |
Query 13 F*VIILALM*RCLIKLLHIFALSLWSRWMTVCFSFPTR*NSS*NLERQKHLI*IFCMRFFSLLWICRRALIGRTLFK 243 F*V I M*R LIK I LS + M C SF T *+ + K I I C RFF+LLWICRR LIG+ L++ Subject 8588 F*VTISVSM*RYLIKRRRISVLSF*FK*MMTCISFQTL*SYLLSSGLLKRPISICCTRFFNLLWICRRVLIGKMLYR 8818
Range 9: 8390 to 8560 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
39.6 bits(80) | 0.0 | 28/57(49%) | 0/57(0%) | Minus/Plus |
Query 271 GP*RRSLCCLLDRKGGVVEQTLG*VIVSFFVLCCPLYLGV*ITIMWS*AAMIVLFLA 441 G * +S CC + VVE LG I F L YLGV*ITI S A I LFLA Subject 8390 GQ*PKS*CCPSALRDVVVEPILGWGIA*FCALF*A*YLGV*ITITSSLVATIALFLA 8560
Nucleotide Sequence (258 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
203.6 | 956.2 | 23% | 4.241e-51 | 90% | AJ606346.1 | |
203.6 | 956.6 | 23% | 4.241e-51 | 98% | AJ606348.1 | |
203.6 | 966.3 | 23% | 4.241e-51 | 100% | AJ606349.1 | |
203.6 | 966.3 | 23% | 4.241e-51 | 100% | AJ606350.1 | |
203.6 | 956.6 | 23% | 4.241e-51 | 98% | AJ606351.1 |
Alignments
Grapevine leafroll associated virus 3 partial CP gene for coat protein, genomic RNA, isolate TA 3.3
Sequence ID: AJ606346.1 Length: 484 Number of Matches: 11
Range 1: 35 to 289 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
203.6 bits(438) | 0.0 | 85/85(100%) | 0/85(0%) | Plus/Plus |
Query 3 KSSPKII*ELE*GMRHKENLVRRVS*STLRTGHRRN*RESP*CPKNTYSPQQLWLQRRRSHLGSHQRKWWNHRKPI*G*CRNLRL 257 KSSPKII*ELE*GMRHKENLVRRVS*STLRTGHRRN*RESP*CPKNTYSPQQLWLQRRRSHLGSHQRKWWNHRKPI*G*CRNLRL Subject 35 KSSPKII*ELE*GMRHKENLVRRVS*STLRTGHRRN*RESP*CPKNTYSPQQLWLQRRRSHLGSHQRKWWNHRKPI*G*CRNLRL 289
Range 2: 34 to 201 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
141.7 bits(303) | 0.0 | 56/56(100%) | 0/56(0%) | Minus/Minus |
Query 2 CSQSCCGEYVFFGHYGDSR*FRLCPVLNVL*ETRLTKFSLCRIPYSNSQIIFGDDF 169 CSQSCCGEYVFFGHYGDSR*FRLCPVLNVL*ETRLTKFSLCRIPYSNSQIIFGDDF Subject 34 CSQSCCGEYVFFGHYGDSR*FRLCPVLNVL*ETRLTKFSLCRIPYSNSQIIFGDDF 201
Range 3: 256 to 288 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
31.8 bits(63) | 0.0 | 11/11(100%) | 0/11(0%) | Minus/Minus |
Query 224 SLRFRHYPYIG 256 SLRFRHYPYIG Subject 256 SLRFRHYPYIG 288
Range 4: 33 to 200 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
125.7 bits(268) | 0.0 | 56/56(100%) | 0/56(0%) | Plus/Plus |
Query 1 *SRPRK*FES*SRGCGTRKI**GEFLKVR*GRDTGGINGNRRSARKIRIRHSSFGY 168 *SRPRK*FES*SRGCGTRKI**GEFLKVR*GRDTGGINGNRRSARKIRIRHSSFGY Subject 33 *SRPRK*FES*SRGCGTRKI**GEFLKVR*GRDTGGINGNRRSARKIRIRHSSFGY 200
Range 5: 255 to 290 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
26.3 bits(51) | 0.0 | 11/12(92%) | 0/12(0%) | Plus/Plus |
Query 223 NRYRGSAGI*DS 258 NRYR SAGI*DS Subject 255 NRYRDSAGI*DS 290
Range 6: 35 to 184 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
119.3 bits(254) | 0.0 | 50/50(100%) | 0/50(0%) | Minus/Minus |
Query 3 WRIRIFRALRRFPLIPPVSRP*RTLRNSPY*IFLVPHPLL*LSNYFRGRL 152 WRIRIFRALRRFPLIPPVSRP*RTLRNSPY*IFLVPHPLL*LSNYFRGRL Subject 35 WRIRIFRALRRFPLIPPVSRP*RTLRNSPY*IFLVPHPLL*LSNYFRGRL 184
Range 7: 254 to 289 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
27.6 bits(54) | 0.0 | 11/12(92%) | 0/12(0%) | Minus/Minus |
Query 222 ESQIPALPLYRF 257 ESQIPAL LYRF Subject 254 ESQIPALSLYRF 289
Range 8: 33 to 179 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
118.7 bits(253) | 0.0 | 49/49(100%) | 0/49(0%) | Minus/Minus |
Query 1 NTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLKLFSGTTS 147 NTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLKLFSGTTS Subject 33 NTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLKLFSGTTS 179
Range 9: 261 to 290 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
23.1 bits(44) | 0.0 | 9/10(90%) | 0/10(0%) | Minus/Minus |
Query 229 RVSDSGTTPI 258 RVSDSGT PI Subject 261 RVSDSGTIPI 290
Grapevine leafroll associated virus 3 partial CP gene for coat protein, genomic RNA, isolate SS 5.1
Sequence ID: AJ606348.1 Length: 484 Number of Matches: 11
Range 1: 35 to 289 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
203.6 bits(438) | 0.0 | 85/85(100%) | 0/85(0%) | Plus/Plus |
Query 3 KSSPKII*ELE*GMRHKENLVRRVS*STLRTGHRRN*RESP*CPKNTYSPQQLWLQRRRSHLGSHQRKWWNHRKPI*G*CRNLRL 257 KSSPKII*ELE*GMRHKENLVRRVS*STLRTGHRRN*RESP*CPKNTYSPQQLWLQRRRSHLGSHQRKWWNHRKPI*G*CRNLRL Subject 35 KSSPKII*ELE*GMRHKENLVRRVS*STLRTGHRRN*RESP*CPKNTYSPQQLWLQRRRSHLGSHQRKWWNHRKPI*G*CRNLRL 289
Range 2: 34 to 201 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
141.7 bits(303) | 0.0 | 56/56(100%) | 0/56(0%) | Minus/Minus |
Query 2 CSQSCCGEYVFFGHYGDSR*FRLCPVLNVL*ETRLTKFSLCRIPYSNSQIIFGDDF 169 CSQSCCGEYVFFGHYGDSR*FRLCPVLNVL*ETRLTKFSLCRIPYSNSQIIFGDDF Subject 34 CSQSCCGEYVFFGHYGDSR*FRLCPVLNVL*ETRLTKFSLCRIPYSNSQIIFGDDF 201
Range 3: 256 to 288 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
31.8 bits(63) | 0.0 | 11/11(100%) | 0/11(0%) | Minus/Minus |
Query 224 SLRFRHYPYIG 256 SLRFRHYPYIG Subject 256 SLRFRHYPYIG 288
Range 4: 33 to 200 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.4 bits(263) | 0.0 | 55/56(98%) | 0/56(0%) | Plus/Plus |
Query 1 *SRPRK*FES*SRGCGTRKI**GEFLKVR*GRDTGGINGNRRSARKIRIRHSSFGY 168 *S PRK*FES*SRGCGTRKI**GEFLKVR*GRDTGGINGNRRSARKIRIRHSSFGY Subject 33 *SHPRK*FES*SRGCGTRKI**GEFLKVR*GRDTGGINGNRRSARKIRIRHSSFGY 200
Range 5: 255 to 290 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
29.5 bits(58) | 0.0 | 12/12(100%) | 0/12(0%) | Plus/Plus |
Query 223 NRYRGSAGI*DS 258 NRYRGSAGI*DS Subject 255 NRYRGSAGI*DS 290
Range 6: 33 to 179 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
115.9 bits(247) | 0.0 | 48/49(98%) | 0/49(0%) | Minus/Minus |
Query 1 NTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLKLFSGTTS 147 NTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLKLFSG TS Subject 33 NTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLKLFSGMTS 179
Range 7: 254 to 289 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
31.3 bits(62) | 0.0 | 12/12(100%) | 0/12(0%) | Minus/Minus |
Query 222 ESQIPALPLYRF 257 ESQIPALPLYRF Subject 254 ESQIPALPLYRF 289
Range 8: 41 to 184 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
115.2 bits(245) | 0.0 | 48/48(100%) | 0/48(0%) | Minus/Minus |
Query 9 WRIRIFRALRRFPLIPPVSRP*RTLRNSPY*IFLVPHPLL*LSNYFRG 152 WRIRIFRALRRFPLIPPVSRP*RTLRNSPY*IFLVPHPLL*LSNYFRG Subject 41 WRIRIFRALRRFPLIPPVSRP*RTLRNSPY*IFLVPHPLL*LSNYFRG 184
Range 9: 261 to 290 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
25.8 bits(50) | 0.0 | 10/10(100%) | 0/10(0%) | Minus/Minus |
Query 229 RVSDSGTTPI 258 RVSDSGTTPI Subject 261 RVSDSGTTPI 290
Grapevine leafroll associated virus 3 partial CP gene for coat protein, genomic RNA, isolate MN 18
Sequence ID: AJ606349.1 Length: 484 Number of Matches: 11
Range 1: 35 to 289 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
203.6 bits(438) | 0.0 | 85/85(100%) | 0/85(0%) | Plus/Plus |
Query 3 KSSPKII*ELE*GMRHKENLVRRVS*STLRTGHRRN*RESP*CPKNTYSPQQLWLQRRRSHLGSHQRKWWNHRKPI*G*CRNLRL 257 KSSPKII*ELE*GMRHKENLVRRVS*STLRTGHRRN*RESP*CPKNTYSPQQLWLQRRRSHLGSHQRKWWNHRKPI*G*CRNLRL Subject 35 KSSPKII*ELE*GMRHKENLVRRVS*STLRTGHRRN*RESP*CPKNTYSPQQLWLQRRRSHLGSHQRKWWNHRKPI*G*CRNLRL 289
Range 2: 34 to 201 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
141.7 bits(303) | 0.0 | 56/56(100%) | 0/56(0%) | Minus/Minus |
Query 2 CSQSCCGEYVFFGHYGDSR*FRLCPVLNVL*ETRLTKFSLCRIPYSNSQIIFGDDF 169 CSQSCCGEYVFFGHYGDSR*FRLCPVLNVL*ETRLTKFSLCRIPYSNSQIIFGDDF Subject 34 CSQSCCGEYVFFGHYGDSR*FRLCPVLNVL*ETRLTKFSLCRIPYSNSQIIFGDDF 201
Range 3: 256 to 288 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
31.8 bits(63) | 0.0 | 11/11(100%) | 0/11(0%) | Minus/Minus |
Query 224 SLRFRHYPYIG 256 SLRFRHYPYIG Subject 256 SLRFRHYPYIG 288
Range 4: 33 to 200 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
125.7 bits(268) | 0.0 | 56/56(100%) | 0/56(0%) | Plus/Plus |
Query 1 *SRPRK*FES*SRGCGTRKI**GEFLKVR*GRDTGGINGNRRSARKIRIRHSSFGY 168 *SRPRK*FES*SRGCGTRKI**GEFLKVR*GRDTGGINGNRRSARKIRIRHSSFGY Subject 33 *SRPRK*FES*SRGCGTRKI**GEFLKVR*GRDTGGINGNRRSARKIRIRHSSFGY 200
Range 5: 255 to 290 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
29.5 bits(58) | 0.0 | 12/12(100%) | 0/12(0%) | Plus/Plus |
Query 223 NRYRGSAGI*DS 258 NRYRGSAGI*DS Subject 255 NRYRGSAGI*DS 290
Range 6: 35 to 184 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
119.3 bits(254) | 0.0 | 50/50(100%) | 0/50(0%) | Minus/Minus |
Query 3 WRIRIFRALRRFPLIPPVSRP*RTLRNSPY*IFLVPHPLL*LSNYFRGRL 152 WRIRIFRALRRFPLIPPVSRP*RTLRNSPY*IFLVPHPLL*LSNYFRGRL Subject 35 WRIRIFRALRRFPLIPPVSRP*RTLRNSPY*IFLVPHPLL*LSNYFRGRL 184
Range 7: 254 to 289 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
31.3 bits(62) | 0.0 | 12/12(100%) | 0/12(0%) | Minus/Minus |
Query 222 ESQIPALPLYRF 257 ESQIPALPLYRF Subject 254 ESQIPALPLYRF 289
Range 8: 33 to 179 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
118.7 bits(253) | 0.0 | 49/49(100%) | 0/49(0%) | Minus/Minus |
Query 1 NTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLKLFSGTTS 147 NTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLKLFSGTTS Subject 33 NTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLKLFSGTTS 179
Range 9: 261 to 290 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
25.8 bits(50) | 0.0 | 10/10(100%) | 0/10(0%) | Minus/Minus |
Query 229 RVSDSGTTPI 258 RVSDSGTTPI Subject 261 RVSDSGTTPI 290
Grapevine leafroll associated virus 3 partial CP gene for coat protein, genomic RNA, isolate MT 38
Sequence ID: AJ606350.1 Length: 484 Number of Matches: 11
Range 1: 35 to 289 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
203.6 bits(438) | 0.0 | 85/85(100%) | 0/85(0%) | Plus/Plus |
Query 3 KSSPKII*ELE*GMRHKENLVRRVS*STLRTGHRRN*RESP*CPKNTYSPQQLWLQRRRSHLGSHQRKWWNHRKPI*G*CRNLRL 257 KSSPKII*ELE*GMRHKENLVRRVS*STLRTGHRRN*RESP*CPKNTYSPQQLWLQRRRSHLGSHQRKWWNHRKPI*G*CRNLRL Subject 35 KSSPKII*ELE*GMRHKENLVRRVS*STLRTGHRRN*RESP*CPKNTYSPQQLWLQRRRSHLGSHQRKWWNHRKPI*G*CRNLRL 289
Range 2: 34 to 201 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
141.7 bits(303) | 0.0 | 56/56(100%) | 0/56(0%) | Minus/Minus |
Query 2 CSQSCCGEYVFFGHYGDSR*FRLCPVLNVL*ETRLTKFSLCRIPYSNSQIIFGDDF 169 CSQSCCGEYVFFGHYGDSR*FRLCPVLNVL*ETRLTKFSLCRIPYSNSQIIFGDDF Subject 34 CSQSCCGEYVFFGHYGDSR*FRLCPVLNVL*ETRLTKFSLCRIPYSNSQIIFGDDF 201
Range 3: 256 to 288 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
31.8 bits(63) | 0.0 | 11/11(100%) | 0/11(0%) | Minus/Minus |
Query 224 SLRFRHYPYIG 256 SLRFRHYPYIG Subject 256 SLRFRHYPYIG 288
Range 4: 33 to 200 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
125.7 bits(268) | 0.0 | 56/56(100%) | 0/56(0%) | Plus/Plus |
Query 1 *SRPRK*FES*SRGCGTRKI**GEFLKVR*GRDTGGINGNRRSARKIRIRHSSFGY 168 *SRPRK*FES*SRGCGTRKI**GEFLKVR*GRDTGGINGNRRSARKIRIRHSSFGY Subject 33 *SRPRK*FES*SRGCGTRKI**GEFLKVR*GRDTGGINGNRRSARKIRIRHSSFGY 200
Range 5: 255 to 290 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
29.5 bits(58) | 0.0 | 12/12(100%) | 0/12(0%) | Plus/Plus |
Query 223 NRYRGSAGI*DS 258 NRYRGSAGI*DS Subject 255 NRYRGSAGI*DS 290
Range 6: 35 to 184 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
119.3 bits(254) | 0.0 | 50/50(100%) | 0/50(0%) | Minus/Minus |
Query 3 WRIRIFRALRRFPLIPPVSRP*RTLRNSPY*IFLVPHPLL*LSNYFRGRL 152 WRIRIFRALRRFPLIPPVSRP*RTLRNSPY*IFLVPHPLL*LSNYFRGRL Subject 35 WRIRIFRALRRFPLIPPVSRP*RTLRNSPY*IFLVPHPLL*LSNYFRGRL 184
Range 7: 254 to 289 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
31.3 bits(62) | 0.0 | 12/12(100%) | 0/12(0%) | Minus/Minus |
Query 222 ESQIPALPLYRF 257 ESQIPALPLYRF Subject 254 ESQIPALPLYRF 289
Range 8: 33 to 179 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
118.7 bits(253) | 0.0 | 49/49(100%) | 0/49(0%) | Minus/Minus |
Query 1 NTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLKLFSGTTS 147 NTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLKLFSGTTS Subject 33 NTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLKLFSGTTS 179
Range 9: 261 to 290 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
25.8 bits(50) | 0.0 | 10/10(100%) | 0/10(0%) | Minus/Minus |
Query 229 RVSDSGTTPI 258 RVSDSGTTPI Subject 261 RVSDSGTTPI 290
Grapevine leafroll associated virus 3 partial CP gene for coat protein, genomic RNA, isolate MT 48
Sequence ID: AJ606351.1 Length: 484 Number of Matches: 11
Range 1: 35 to 289 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
203.6 bits(438) | 0.0 | 85/85(100%) | 0/85(0%) | Plus/Plus |
Query 3 KSSPKII*ELE*GMRHKENLVRRVS*STLRTGHRRN*RESP*CPKNTYSPQQLWLQRRRSHLGSHQRKWWNHRKPI*G*CRNLRL 257 KSSPKII*ELE*GMRHKENLVRRVS*STLRTGHRRN*RESP*CPKNTYSPQQLWLQRRRSHLGSHQRKWWNHRKPI*G*CRNLRL Subject 35 KSSPKII*ELE*GMRHKENLVRRVS*STLRTGHRRN*RESP*CPKNTYSPQQLWLQRRRSHLGSHQRKWWNHRKPI*G*CRNLRL 289
Range 2: 34 to 201 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
141.7 bits(303) | 0.0 | 56/56(100%) | 0/56(0%) | Minus/Minus |
Query 2 CSQSCCGEYVFFGHYGDSR*FRLCPVLNVL*ETRLTKFSLCRIPYSNSQIIFGDDF 169 CSQSCCGEYVFFGHYGDSR*FRLCPVLNVL*ETRLTKFSLCRIPYSNSQIIFGDDF Subject 34 CSQSCCGEYVFFGHYGDSR*FRLCPVLNVL*ETRLTKFSLCRIPYSNSQIIFGDDF 201
Range 3: 256 to 288 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
31.8 bits(63) | 0.0 | 11/11(100%) | 0/11(0%) | Minus/Minus |
Query 224 SLRFRHYPYIG 256 SLRFRHYPYIG Subject 256 SLRFRHYPYIG 288
Range 4: 33 to 200 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.4 bits(263) | 0.0 | 55/56(98%) | 0/56(0%) | Plus/Plus |
Query 1 *SRPRK*FES*SRGCGTRKI**GEFLKVR*GRDTGGINGNRRSARKIRIRHSSFGY 168 *S PRK*FES*SRGCGTRKI**GEFLKVR*GRDTGGINGNRRSARKIRIRHSSFGY Subject 33 *SHPRK*FES*SRGCGTRKI**GEFLKVR*GRDTGGINGNRRSARKIRIRHSSFGY 200
Range 5: 255 to 290 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
29.5 bits(58) | 0.0 | 12/12(100%) | 0/12(0%) | Plus/Plus |
Query 223 NRYRGSAGI*DS 258 NRYRGSAGI*DS Subject 255 NRYRGSAGI*DS 290
Range 6: 33 to 179 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
115.9 bits(247) | 0.0 | 48/49(98%) | 0/49(0%) | Minus/Minus |
Query 1 NTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLKLFSGTTS 147 NTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLKLFSG TS Subject 33 NTYFSGTTAIPVNSACVPSLTYFKKLALLNFPCAASPTLTLKLFSGMTS 179
Range 7: 254 to 289 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
31.3 bits(62) | 0.0 | 12/12(100%) | 0/12(0%) | Minus/Minus |
Query 222 ESQIPALPLYRF 257 ESQIPALPLYRF Subject 254 ESQIPALPLYRF 289
Range 8: 41 to 184 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
115.2 bits(245) | 0.0 | 48/48(100%) | 0/48(0%) | Minus/Minus |
Query 9 WRIRIFRALRRFPLIPPVSRP*RTLRNSPY*IFLVPHPLL*LSNYFRG 152 WRIRIFRALRRFPLIPPVSRP*RTLRNSPY*IFLVPHPLL*LSNYFRG Subject 41 WRIRIFRALRRFPLIPPVSRP*RTLRNSPY*IFLVPHPLL*LSNYFRG 184
Range 9: 261 to 290 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
25.8 bits(50) | 0.0 | 10/10(100%) | 0/10(0%) | Minus/Minus |
Query 229 RVSDSGTTPI 258 RVSDSGTTPI Subject 261 RVSDSGTTPI 290
Nucleotide Sequence (305 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
214.1 | 1055.7 | 25% | 4.277e-54 | 84% | JX559645.1 | |
214.1 | 1037.4 | 25% | 4.277e-54 | 82% | NC_004667.1 | |
214.1 | 1046.5 | 25% | 4.277e-54 | 84% | KJ174518.1 | |
214.1 | 1037.4 | 25% | 4.277e-54 | 82% | AF037268.2 | |
214.1 | 1055.7 | 25% | 4.277e-54 | 84% | GQ352631.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 6
Range 1: 6777 to 7073 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
214.1 bits(461) | 0.0 | 89/99(90%) | 0/99(0%) | Minus/Plus |
Query 1 MHQALLQLGVFATGASEGLFFADINHIPFINSEKAFRMDCPVFVPKKESVIYTSKSYR*PLDDCYFLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP 297 MHQ LLQLGVFATGASEGLFF DIN IPFIN EK FRMDC VFVPKKESV+YTSKSYR PLD CY LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP Subject 6777 MHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP 7073
Range 2: 6777 to 7073 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
199.9 bits(430) | 0.0 | 84/99(85%) | 0/99(0%) | Plus/Minus |
Query 1 WPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQEVAII*RSPV*FRSVYNAFLLWNKNRTIHPKRLLAVYEWYVIYVCEKEAFRRAGCEDA*L**GLMH 297 WPFGQ S+Y ILT NDLFRVTLFRSPYGH*GQ+VA I*R+PV*FRSVYNAFLLWNKN TIHPK LL VYEWY+IYV +KEAFRRAGCEDA*L** LMH Subject 6777 WPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMH 7073
Range 3: 6778 to 7071 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
190.8 bits(410) | 0.0 | 85/98(87%) | 0/98(0%) | Minus/Plus |
Query 3 CIKPYYN*ASSQPARRKASFSQT*ITYHS*TARRRLGWIVLFLFQRRKALYTLLNHTGDR*MIATSCPQ*P*GERKSVTLKRSLVVRISR**DHCPKG 296 CIK YYN*ASSQPARRKASF +T*I YHS*T RR LGWIVLFLFQRRKALYTLLNHTG R*M AT CPQ*P*GERKSVTLKRSL VRI++**D CPKG Subject 6778 CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKG 7071
Range 4: 6776 to 7021 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
172.9 bits(371) | 0.0 | 74/82(90%) | 0/82(0%) | Plus/Minus |
Query 53 FSG*HFSVPLTVIEDKK*QSSNGHLYDLEVYITLSFFGTKTGQSILNAFSLFMNGM*FMSAKKRPSDAPVAKTPSCSKA*CI 298 FSG*HFSVPLTVIED K*Q+SNGHLYDLEVY TLSFFGTKT QSILN FSLFMNG+*FMS KKRPSDAPVAKTPSCSK *CI Subject 6776 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CI 7021
Range 5: 6844 to 7071 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
150.0 bits(321) | 0.0 | 64/76(84%) | 0/76(0%) | Plus/Minus |
Query 3 AFWTVISLPAYPYH*RPFQGNTFPFPLRSLRTRSSNHLTVTCMI*KCI*RFPSLEQKQDNPS*TPSRCL*MVCDLC 230 AFWT I L YPY *RPFQGNTFPFPLRSLRT SS HLT TCMI*KCI RFPSLEQKQ NPS*TPS CL*MV DLC Subject 6844 AFWTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLC 7071
Range 6: 6845 to 7072 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.0 bits(273) | 0.0 | 64/76(84%) | 0/76(0%) | Minus/Plus |
Query 2 HKSHTIHKQREGV*DGLSCFCSKEGKRYIHF*IIQVTVRXXXXXXLNDRKGNGKVLP*KGR*W*G*AGSEITVQKA 229 HKS TIHKQ EGV*DGL CFCSKEGKR IHF*IIQV+VR LLL+VLNDRKGNGKVLP*KGR* *G* S+I VQKA Subject 6845 HKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKA 7072
Grapevine leafroll associated virus 3, complete genome
Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 6
Range 1: 6198 to 6494 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
214.1 bits(461) | 0.0 | 89/99(90%) | 0/99(0%) | Minus/Plus |
Query 1 MHQALLQLGVFATGASEGLFFADINHIPFINSEKAFRMDCPVFVPKKESVIYTSKSYR*PLDDCYFLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP 297 MHQ LLQLGVFATGASEGLFF DIN IPFIN EK FRMDC VFVPKKESV+YTSKSYR PLD CY LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP Subject 6198 MHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP 6494
Range 2: 6198 to 6494 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
197.2 bits(424) | 0.0 | 82/99(83%) | 0/99(0%) | Plus/Minus |
Query 1 WPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQEVAII*RSPV*FRSVYNAFLLWNKNRTIHPKRLLAVYEWYVIYVCEKEAFRRAGCEDA*L**GLMH 297 WPFGQ S+Y +LT NDLFRVTLFRSPYGH*GQ+VA I*R+PV FRSVYNAFLLWNKN TIHPK LL VYEWY+IYV +KEAFRRAGCEDA*L** LMH Subject 6198 WPFGQRSYYWFVLTANDLFRVTLFRSPYGH*GQQVANI*RTPVRFRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMH 6494
Range 3: 6199 to 6492 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
184.8 bits(397) | 0.0 | 83/98(85%) | 0/98(0%) | Minus/Plus |
Query 3 CIKPYYN*ASSQPARRKASFSQT*ITYHS*TARRRLGWIVLFLFQRRKALYTLLNHTGDR*MIATSCPQ*P*GERKSVTLKRSLVVRISR**DHCPKG 296 CIK YYN*ASSQPARRKASF +T*I YHS*T RR LGWIVLFLFQRRKALYTLLN TG R*M AT CPQ*P*GERKSVTLKRSL VR ++**D CPKG Subject 6199 CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNRTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRTNQ**DRCPKG 6492
Range 4: 6197 to 6442 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
172.9 bits(371) | 0.0 | 74/82(90%) | 0/82(0%) | Plus/Minus |
Query 53 FSG*HFSVPLTVIEDKK*QSSNGHLYDLEVYITLSFFGTKTGQSILNAFSLFMNGM*FMSAKKRPSDAPVAKTPSCSKA*CI 298 FSG*HFSVPLTVIED K*Q+SNGHLYDLEVY TLSFFGTKT QSILN FSLFMNG+*FMS KKRPSDAPVAKTPSCSK *CI Subject 6197 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CI 6442
Range 5: 6265 to 6492 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
143.1 bits(306) | 0.0 | 62/76(82%) | 0/76(0%) | Plus/Minus |
Query 3 AFWTVISLPAYPYH*RPFQGNTFPFPLRSLRTRSSNHLTVTCMI*KCI*RFPSLEQKQDNPS*TPSRCL*MVCDLC 230 AFWT I L PY *RPFQGNTFPFPLRSLRT SS HLT TC I*KCI RFPSLEQKQ NPS*TPS CL*MV DLC Subject 6265 AFWTAILLLVCPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCTI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLC 6492
Range 6: 6266 to 6493 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
125.2 bits(267) | 0.0 | 62/76(82%) | 0/76(0%) | Minus/Plus |
Query 2 HKSHTIHKQREGV*DGLSCFCSKEGKRYIHF*IIQVTVRXXXXXXLNDRKGNGKVLP*KGR*W*G*AGSEITVQKA 229 HKS TIHKQ EGV*DGL CFCSKEGKR IHF*I+QV+VR LLL+VLNDRKGNGKVLP*KGR* *G S+I VQKA Subject 6266 HKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IVQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*GQTSSKIAVQKA 6493
Grapevine leafroll associated virus 3, complete genome
Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 6
Range 1: 6777 to 7073 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
214.1 bits(461) | 0.0 | 89/99(90%) | 0/99(0%) | Minus/Plus |
Query 1 MHQALLQLGVFATGASEGLFFADINHIPFINSEKAFRMDCPVFVPKKESVIYTSKSYR*PLDDCYFLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP 297 MHQ LLQLGVFATGASEGLFF DIN IPFIN EK FRMDC VFVPKKESV+YTSKSYR PLD CY LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP Subject 6777 MHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP 7073
Range 2: 6777 to 7073 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.9 bits(419) | 0.0 | 83/99(84%) | 0/99(0%) | Plus/Minus |
Query 1 WPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQEVAII*RSPV*FRSVYNAFLLWNKNRTIHPKRLLAVYEWYVIYVCEKEAFRRAGCEDA*L**GLMH 297 WPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQ+VA +*R+ V*FRSVYN FLLWNK TIHPK LL VYEWY+IYV +KEAFRRA EDA*L** LMH Subject 6777 WPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQQVANV*RTSV*FRSVYNTFLLWNKYSTIHPKHLLPVYEWYLIYVSKKEAFRRASREDA*L**ALMH 7073
Range 3: 6778 to 7071 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
180.7 bits(388) | 0.0 | 82/98(84%) | 0/98(0%) | Minus/Plus |
Query 3 CIKPYYN*ASSQPARRKASFSQT*ITYHS*TARRRLGWIVLFLFQRRKALYTLLNHTGDR*MIATSCPQ*P*GERKSVTLKRSLVVRISR**DHCPKG 296 CIK YYN*ASS+ AR KASF +T*I YHS*T RR LGWIVL+LFQRRK LYTLLNHT R* AT CPQ*P*GERKSVTLKRSLVVRISR**DHCPKG Subject 6778 CIKAYYN*ASSRLARLKASFLET*IRYHS*TGRRCLGWIVLYLFQRRKVLYTLLNHTDVR*TFATCCPQ*P*GERKSVTLKRSLVVRISR**DHCPKG 7071
Range 4: 6776 to 7021 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
169.2 bits(363) | 0.0 | 72/82(88%) | 0/82(0%) | Plus/Minus |
Query 53 FSG*HFSVPLTVIEDKK*QSSNGHLYDLEVYITLSFFGTKTGQSILNAFSLFMNGM*FMSAKKRPSDAPVAKTPSCSKA*CI 298 FSG*HFSVPLTVIED K*Q+SNGHLYDLEVY TLSFFGT T QSILN FSLFMNG+*FMS KKRPSDAPVAKTP+CSK *CI Subject 6776 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTNTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPNCSKP*CI 7021
Range 5: 6844 to 7071 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
152.3 bits(326) | 0.0 | 65/76(86%) | 0/76(0%) | Plus/Minus |
Query 3 AFWTVISLPAYPYH*RPFQGNTFPFPLRSLRTRSSNHLTVTCMI*KCI*RFPSLEQKQDNPS*TPSRCL*MVCDLC 230 AFWTVISLPAYPYH*RPFQGNTFPFPLRSLRT SS LT CMI*KCI FPSLEQ Q NPS*TPS CL*MV DLC Subject 6844 AFWTVISLPAYPYH*RPFQGNTFPFPLRSLRTTSSKRLTDICMI*KCIQHFPSLEQIQHNPS*TPSPCL*MVSDLC 7071
Range 6: 6845 to 7072 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
135.3 bits(289) | 0.0 | 66/76(87%) | 0/76(0%) | Minus/Plus |
Query 2 HKSHTIHKQREGV*DGLSCFCSKEGKRYIHF*IIQVTVRXXXXXXLNDRKGNGKVLP*KGR*W*G*AGSEITVQKA 229 HKS TIHKQ EGV*DGL C CSKEGK IHF*IIQ++VR LLL+VLNDRKGNGKVLP*KGR*W*G*AGSEITVQKA Subject 6845 HKSDTIHKQGEGV*DGLCCICSKEGKCCIHF*IIQMSVRRLLLVVLNDRKGNGKVLP*KGR*W*G*AGSEITVQKA 7072
Grapevine leafroll associated virus 3, complete genome
Sequence ID: AF037268.2 Length: 17919 Number of Matches: 6
Range 1: 6198 to 6494 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
214.1 bits(461) | 0.0 | 89/99(90%) | 0/99(0%) | Minus/Plus |
Query 1 MHQALLQLGVFATGASEGLFFADINHIPFINSEKAFRMDCPVFVPKKESVIYTSKSYR*PLDDCYFLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP 297 MHQ LLQLGVFATGASEGLFF DIN IPFIN EK FRMDC VFVPKKESV+YTSKSYR PLD CY LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP Subject 6198 MHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP 6494
Range 2: 6198 to 6494 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
197.2 bits(424) | 0.0 | 82/99(83%) | 0/99(0%) | Plus/Minus |
Query 1 WPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQEVAII*RSPV*FRSVYNAFLLWNKNRTIHPKRLLAVYEWYVIYVCEKEAFRRAGCEDA*L**GLMH 297 WPFGQ S+Y +LT NDLFRVTLFRSPYGH*GQ+VA I*R+PV FRSVYNAFLLWNKN TIHPK LL VYEWY+IYV +KEAFRRAGCEDA*L** LMH Subject 6198 WPFGQRSYYWFVLTANDLFRVTLFRSPYGH*GQQVANI*RTPVRFRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMH 6494
Range 3: 6199 to 6492 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
184.8 bits(397) | 0.0 | 83/98(85%) | 0/98(0%) | Minus/Plus |
Query 3 CIKPYYN*ASSQPARRKASFSQT*ITYHS*TARRRLGWIVLFLFQRRKALYTLLNHTGDR*MIATSCPQ*P*GERKSVTLKRSLVVRISR**DHCPKG 296 CIK YYN*ASSQPARRKASF +T*I YHS*T RR LGWIVLFLFQRRKALYTLLN TG R*M AT CPQ*P*GERKSVTLKRSL VR ++**D CPKG Subject 6199 CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNRTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRTNQ**DRCPKG 6492
Range 4: 6197 to 6442 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
172.9 bits(371) | 0.0 | 74/82(90%) | 0/82(0%) | Plus/Minus |
Query 53 FSG*HFSVPLTVIEDKK*QSSNGHLYDLEVYITLSFFGTKTGQSILNAFSLFMNGM*FMSAKKRPSDAPVAKTPSCSKA*CI 298 FSG*HFSVPLTVIED K*Q+SNGHLYDLEVY TLSFFGTKT QSILN FSLFMNG+*FMS KKRPSDAPVAKTPSCSK *CI Subject 6197 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CI 6442
Range 5: 6265 to 6492 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
143.1 bits(306) | 0.0 | 62/76(82%) | 0/76(0%) | Plus/Minus |
Query 3 AFWTVISLPAYPYH*RPFQGNTFPFPLRSLRTRSSNHLTVTCMI*KCI*RFPSLEQKQDNPS*TPSRCL*MVCDLC 230 AFWT I L PY *RPFQGNTFPFPLRSLRT SS HLT TC I*KCI RFPSLEQKQ NPS*TPS CL*MV DLC Subject 6265 AFWTAILLLVCPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCTI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLC 6492
Range 6: 6266 to 6493 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
125.2 bits(267) | 0.0 | 62/76(82%) | 0/76(0%) | Minus/Plus |
Query 2 HKSHTIHKQREGV*DGLSCFCSKEGKRYIHF*IIQVTVRXXXXXXLNDRKGNGKVLP*KGR*W*G*AGSEITVQKA 229 HKS TIHKQ EGV*DGL CFCSKEGKR IHF*I+QV+VR LLL+VLNDRKGNGKVLP*KGR* *G S+I VQKA Subject 6266 HKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IVQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*GQTSSKIAVQKA 6493
Grapevine leafroll associated virus 3 isolate 621, complete genome
Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 6
Range 1: 6777 to 7073 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
214.1 bits(461) | 0.0 | 89/99(90%) | 0/99(0%) | Minus/Plus |
Query 1 MHQALLQLGVFATGASEGLFFADINHIPFINSEKAFRMDCPVFVPKKESVIYTSKSYR*PLDDCYFLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP 297 MHQ LLQLGVFATGASEGLFF DIN IPFIN EK FRMDC VFVPKKESV+YTSKSYR PLD CY LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP Subject 6777 MHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRP 7073
Range 2: 6777 to 7073 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
199.9 bits(430) | 0.0 | 84/99(85%) | 0/99(0%) | Plus/Minus |
Query 1 WPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQEVAII*RSPV*FRSVYNAFLLWNKNRTIHPKRLLAVYEWYVIYVCEKEAFRRAGCEDA*L**GLMH 297 WPFGQ S+Y ILT NDLFRVTLFRSPYGH*GQ+VA I*R+PV*FRSVYNAFLLWNKN TIHPK LL VYEWY+IYV +KEAFRRAGCEDA*L** LMH Subject 6777 WPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMH 7073
Range 3: 6778 to 7071 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
190.8 bits(410) | 0.0 | 85/98(87%) | 0/98(0%) | Minus/Plus |
Query 3 CIKPYYN*ASSQPARRKASFSQT*ITYHS*TARRRLGWIVLFLFQRRKALYTLLNHTGDR*MIATSCPQ*P*GERKSVTLKRSLVVRISR**DHCPKG 296 CIK YYN*ASSQPARRKASF +T*I YHS*T RR LGWIVLFLFQRRKALYTLLNHTG R*M AT CPQ*P*GERKSVTLKRSL VRI++**D CPKG Subject 6778 CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKG 7071
Range 4: 6776 to 7021 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
172.9 bits(371) | 0.0 | 74/82(90%) | 0/82(0%) | Plus/Minus |
Query 53 FSG*HFSVPLTVIEDKK*QSSNGHLYDLEVYITLSFFGTKTGQSILNAFSLFMNGM*FMSAKKRPSDAPVAKTPSCSKA*CI 298 FSG*HFSVPLTVIED K*Q+SNGHLYDLEVY TLSFFGTKT QSILN FSLFMNG+*FMS KKRPSDAPVAKTPSCSK *CI Subject 6776 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CI 7021
Range 5: 6844 to 7071 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
150.0 bits(321) | 0.0 | 64/76(84%) | 0/76(0%) | Plus/Minus |
Query 3 AFWTVISLPAYPYH*RPFQGNTFPFPLRSLRTRSSNHLTVTCMI*KCI*RFPSLEQKQDNPS*TPSRCL*MVCDLC 230 AFWT I L YPY *RPFQGNTFPFPLRSLRT SS HLT TCMI*KCI RFPSLEQKQ NPS*TPS CL*MV DLC Subject 6844 AFWTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLC 7071
Range 6: 6845 to 7072 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.0 bits(273) | 0.0 | 64/76(84%) | 0/76(0%) | Minus/Plus |
Query 2 HKSHTIHKQREGV*DGLSCFCSKEGKRYIHF*IIQVTVRXXXXXXLNDRKGNGKVLP*KGR*W*G*AGSEITVQKA 229 HKS TIHKQ EGV*DGL CFCSKEGKR IHF*IIQV+VR LLL+VLNDRKGNGKVLP*KGR* *G* S+I VQKA Subject 6845 HKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKA 7072
Nucleotide Sequence (199 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
153.7 | 671.3 | 24% | 2.311e-36 | 98% | JX559645.1 | |
153.7 | 671.3 | 24% | 2.311e-36 | 98% | GQ352631.1 | |
153.7 | 671.3 | 24% | 2.311e-36 | 98% | GU983863.1 | |
153.7 | 671.3 | 24% | 2.311e-36 | 98% | AY495340.1 | |
153.7 | 671.3 | 24% | 2.311e-36 | 98% | EU344893.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 6
Range 1: 8489 to 8686 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
153.7 bits(329) | 0.0 | 66/66(100%) | 0/66(0%) | Plus/Minus |
Query 2 KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT 199 KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT Subject 8489 KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT 8686
Range 2: 8491 to 8685 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
151.8 bits(325) | 0.0 | 64/65(98%) | 0/65(0%) | Minus/Plus |
Query 3 SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSALSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF 197 SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTS LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF Subject 8491 SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF 8685
Range 3: 8490 to 8630 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
99.6 bits(211) | 0.0 | 47/47(100%) | 0/47(0%) | Minus/Plus |
Query 58 VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P 198 VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P Subject 8490 VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P 8630
Range 4: 8621 to 8686 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.7 bits(100) | 0.0 | 22/22(100%) | 0/22(0%) | Minus/Plus |
Query 2 YLTKLLLIFVLSF*FKSRIVSF 67 YLTKLLLIFVLSF*FKSRIVSF Subject 8621 YLTKLLLIFVLSF*FKSRIVSF 8686
Range 5: 8491 to 8685 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
111.5 bits(237) | 0.0 | 64/65(98%) | 0/65(0%) | Plus/Minus |
Query 3 KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQSRRINI*RLPTKYEAXXXXXXXXXXXXSPKYYG 197 KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQ+RRINI*RLPTKYEAIITTNYNITII*SPKYYG Subject 8491 KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQNRRINI*RLPTKYEAIITTNYNITII*SPKYYG 8685
Grapevine leafroll associated virus 3 isolate 621, complete genome
Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 6
Range 1: 8489 to 8686 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
153.7 bits(329) | 0.0 | 66/66(100%) | 0/66(0%) | Plus/Minus |
Query 2 KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT 199 KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT Subject 8489 KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT 8686
Range 2: 8491 to 8685 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
151.8 bits(325) | 0.0 | 64/65(98%) | 0/65(0%) | Minus/Plus |
Query 3 SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSALSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF 197 SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTS LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF Subject 8491 SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF 8685
Range 3: 8490 to 8630 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
99.6 bits(211) | 0.0 | 47/47(100%) | 0/47(0%) | Minus/Plus |
Query 58 VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P 198 VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P Subject 8490 VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P 8630
Range 4: 8621 to 8686 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.7 bits(100) | 0.0 | 22/22(100%) | 0/22(0%) | Minus/Plus |
Query 2 YLTKLLLIFVLSF*FKSRIVSF 67 YLTKLLLIFVLSF*FKSRIVSF Subject 8621 YLTKLLLIFVLSF*FKSRIVSF 8686
Range 5: 8491 to 8685 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
111.5 bits(237) | 0.0 | 64/65(98%) | 0/65(0%) | Plus/Minus |
Query 3 KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQSRRINI*RLPTKYEAXXXXXXXXXXXXSPKYYG 197 KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQ+RRINI*RLPTKYEAIITTNYNITII*SPKYYG Subject 8491 KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQNRRINI*RLPTKYEAIITTNYNITII*SPKYYG 8685
Grapevine leafroll associated virus 3 isolate WA MR, complete genome
Sequence ID: GU983863.1 Length: 18498 Number of Matches: 6
Range 1: 8489 to 8686 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
153.7 bits(329) | 0.0 | 66/66(100%) | 0/66(0%) | Plus/Minus |
Query 2 KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT 199 KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT Subject 8489 KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT 8686
Range 2: 8491 to 8685 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
151.8 bits(325) | 0.0 | 64/65(98%) | 0/65(0%) | Minus/Plus |
Query 3 SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSALSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF 197 SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTS LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF Subject 8491 SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF 8685
Range 3: 8490 to 8630 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
99.6 bits(211) | 0.0 | 47/47(100%) | 0/47(0%) | Minus/Plus |
Query 58 VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P 198 VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P Subject 8490 VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P 8630
Range 4: 8621 to 8686 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.7 bits(100) | 0.0 | 22/22(100%) | 0/22(0%) | Minus/Plus |
Query 2 YLTKLLLIFVLSF*FKSRIVSF 67 YLTKLLLIFVLSF*FKSRIVSF Subject 8621 YLTKLLLIFVLSF*FKSRIVSF 8686
Range 5: 8491 to 8685 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
111.5 bits(237) | 0.0 | 64/65(98%) | 0/65(0%) | Plus/Minus |
Query 3 KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQSRRINI*RLPTKYEAXXXXXXXXXXXXSPKYYG 197 KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQ+RRINI*RLPTKYEAIITTNYNITII*SPKYYG Subject 8491 KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQNRRINI*RLPTKYEAIITTNYNITII*SPKYYG 8685
Grapevine leafroll associated virus 3 RNA dependent RNA polymerase (RdRp) gene, partial cds
Sequence ID: AY495340.1 Length: 1655 Number of Matches: 6
Range 1: 1064 to 1261 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
153.7 bits(329) | 0.0 | 66/66(100%) | 0/66(0%) | Plus/Minus |
Query 2 KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT 199 KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT Subject 1064 KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT 1261
Range 2: 1066 to 1260 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
151.8 bits(325) | 0.0 | 64/65(98%) | 0/65(0%) | Minus/Plus |
Query 3 SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSALSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF 197 SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTS LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF Subject 1066 SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF 1260
Range 3: 1065 to 1205 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
99.6 bits(211) | 0.0 | 47/47(100%) | 0/47(0%) | Minus/Plus |
Query 58 VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P 198 VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P Subject 1065 VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P 1205
Range 4: 1196 to 1261 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.7 bits(100) | 0.0 | 22/22(100%) | 0/22(0%) | Minus/Plus |
Query 2 YLTKLLLIFVLSF*FKSRIVSF 67 YLTKLLLIFVLSF*FKSRIVSF Subject 1196 YLTKLLLIFVLSF*FKSRIVSF 1261
Range 5: 1066 to 1260 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
111.5 bits(237) | 0.0 | 64/65(98%) | 0/65(0%) | Plus/Minus |
Query 3 KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQSRRINI*RLPTKYEAXXXXXXXXXXXXSPKYYG 197 KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQ+RRINI*RLPTKYEAIITTNYNITII*SPKYYG Subject 1066 KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQNRRINI*RLPTKYEAIITTNYNITII*SPKYYG 1260
Grapevine leafroll associated virus 3 isolate Cl 766, complete genome
Sequence ID: EU344893.1 Length: 17919 Number of Matches: 6
Range 1: 7910 to 8107 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
153.7 bits(329) | 0.0 | 66/66(100%) | 0/66(0%) | Plus/Minus |
Query 2 KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT 199 KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT Subject 7910 KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT 8107
Range 2: 7912 to 8106 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
151.8 bits(325) | 0.0 | 64/65(98%) | 0/65(0%) | Minus/Plus |
Query 3 SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSALSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF 197 SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTS LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF Subject 7912 SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF 8106
Range 3: 7911 to 8051 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
99.6 bits(211) | 0.0 | 47/47(100%) | 0/47(0%) | Minus/Plus |
Query 58 VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P 198 VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P Subject 7911 VRST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P 8051
Range 4: 8042 to 8107 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.7 bits(100) | 0.0 | 22/22(100%) | 0/22(0%) | Minus/Plus |
Query 2 YLTKLLLIFVLSF*FKSRIVSF 67 YLTKLLLIFVLSF*FKSRIVSF Subject 8042 YLTKLLLIFVLSF*FKSRIVSF 8107
Range 5: 7912 to 8106 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
111.5 bits(237) | 0.0 | 64/65(98%) | 0/65(0%) | Plus/Minus |
Query 3 KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQSRRINI*RLPTKYEAXXXXXXXXXXXXSPKYYG 197 KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQ+RRINI*RLPTKYEAIITTNYNITII*SPKYYG Subject 7912 KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQNRRINI*RLPTKYEAIITTNYNITII*SPKYYG 8106
Nucleotide Sequence (119 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
85.4 | 430.7 | 18% | 4.269e-16 | 95% | HQ130295.1 | |
85.4 | 430.7 | 18% | 4.269e-16 | 95% | HQ130297.1 | |
85.4 | 430.7 | 18% | 4.269e-16 | 95% | HQ130299.1 | |
85.4 | 430.7 | 18% | 4.269e-16 | 95% | HQ130300.1 | |
85.4 | 430.7 | 18% | 4.269e-16 | 95% | HQ130301.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 6 6 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130295.1 Length: 4711 Number of Matches: 6
Range 1: 3535 to 3630 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
85.4 bits(180) | 0.0 | 31/32(97%) | 0/32(0%) | Minus/Minus |
Query 22 KCCSTFPPPCLPTQTSFKESTRPNPRFSPDKI 117 KCCSTFPPPCLPTQTSFKEST PNPRFSPDKI Subject 3535 KCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI 3630
Range 2: 3534 to 3632 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
77.6 bits(163) | 0.0 | 33/33(100%) | 0/33(0%) | Plus/Plus |
Query 21 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY 119 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY Subject 3534 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY 3632
Range 3: 3534 to 3632 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
75.3 bits(158) | 0.0 | 32/33(97%) | 0/33(0%) | Minus/Minus |
Query 21 VSAVVRFHLLVYLRKLASRNLRAPILDSPQTKY 119 VSAVVRFHLLVYLRKLASRNLR PILDSPQTKY Subject 3534 VSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY 3632
Range 4: 3536 to 3631 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
74.4 bits(156) | 0.0 | 31/32(97%) | 0/32(0%) | Plus/Plus |
Query 23 ILSGENRGLGRVDSLKLVCVGRQGGGNVLQHL 118 ILSGENRGLG VDSLKLVCVGRQGGGNVLQHL Subject 3536 ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHL 3631
Grapevine leafroll associated virus 3 isolate 6 11 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130297.1 Length: 4711 Number of Matches: 6
Range 1: 3535 to 3630 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
85.4 bits(180) | 0.0 | 31/32(97%) | 0/32(0%) | Minus/Minus |
Query 22 KCCSTFPPPCLPTQTSFKESTRPNPRFSPDKI 117 KCCSTFPPPCLPTQTSFKEST PNPRFSPDKI Subject 3535 KCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI 3630
Range 2: 3534 to 3632 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
77.6 bits(163) | 0.0 | 33/33(100%) | 0/33(0%) | Plus/Plus |
Query 21 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY 119 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY Subject 3534 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY 3632
Range 3: 3534 to 3632 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
75.3 bits(158) | 0.0 | 32/33(97%) | 0/33(0%) | Minus/Minus |
Query 21 VSAVVRFHLLVYLRKLASRNLRAPILDSPQTKY 119 VSAVVRFHLLVYLRKLASRNLR PILDSPQTKY Subject 3534 VSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY 3632
Range 4: 3536 to 3631 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
74.4 bits(156) | 0.0 | 31/32(97%) | 0/32(0%) | Plus/Plus |
Query 23 ILSGENRGLGRVDSLKLVCVGRQGGGNVLQHL 118 ILSGENRGLG VDSLKLVCVGRQGGGNVLQHL Subject 3536 ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHL 3631
Grapevine leafroll associated virus 3 isolate 6 15 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130299.1 Length: 4711 Number of Matches: 6
Range 1: 3535 to 3630 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
85.4 bits(180) | 0.0 | 31/32(97%) | 0/32(0%) | Minus/Minus |
Query 22 KCCSTFPPPCLPTQTSFKESTRPNPRFSPDKI 117 KCCSTFPPPCLPTQTSFKEST PNPRFSPDKI Subject 3535 KCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI 3630
Range 2: 3534 to 3632 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
77.6 bits(163) | 0.0 | 33/33(100%) | 0/33(0%) | Plus/Plus |
Query 21 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY 119 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY Subject 3534 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY 3632
Range 3: 3534 to 3632 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
75.3 bits(158) | 0.0 | 32/33(97%) | 0/33(0%) | Minus/Minus |
Query 21 VSAVVRFHLLVYLRKLASRNLRAPILDSPQTKY 119 VSAVVRFHLLVYLRKLASRNLR PILDSPQTKY Subject 3534 VSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY 3632
Range 4: 3536 to 3631 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
74.4 bits(156) | 0.0 | 31/32(97%) | 0/32(0%) | Plus/Plus |
Query 23 ILSGENRGLGRVDSLKLVCVGRQGGGNVLQHL 118 ILSGENRGLG VDSLKLVCVGRQGGGNVLQHL Subject 3536 ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHL 3631
Grapevine leafroll associated virus 3 isolate 6 18 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130300.1 Length: 4711 Number of Matches: 6
Range 1: 3535 to 3630 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
85.4 bits(180) | 0.0 | 31/32(97%) | 0/32(0%) | Minus/Minus |
Query 22 KCCSTFPPPCLPTQTSFKESTRPNPRFSPDKI 117 KCCSTFPPPCLPTQTSFKEST PNPRFSPDKI Subject 3535 KCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI 3630
Range 2: 3534 to 3632 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
77.6 bits(163) | 0.0 | 33/33(100%) | 0/33(0%) | Plus/Plus |
Query 21 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY 119 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY Subject 3534 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY 3632
Range 3: 3534 to 3632 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
75.3 bits(158) | 0.0 | 32/33(97%) | 0/33(0%) | Minus/Minus |
Query 21 VSAVVRFHLLVYLRKLASRNLRAPILDSPQTKY 119 VSAVVRFHLLVYLRKLASRNLR PILDSPQTKY Subject 3534 VSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY 3632
Range 4: 3536 to 3631 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
74.4 bits(156) | 0.0 | 31/32(97%) | 0/32(0%) | Plus/Plus |
Query 23 ILSGENRGLGRVDSLKLVCVGRQGGGNVLQHL 118 ILSGENRGLG VDSLKLVCVGRQGGGNVLQHL Subject 3536 ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHL 3631
Grapevine leafroll associated virus 3 isolate 6 102 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130301.1 Length: 4711 Number of Matches: 6
Range 1: 3535 to 3630 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
85.4 bits(180) | 0.0 | 31/32(97%) | 0/32(0%) | Minus/Minus |
Query 22 KCCSTFPPPCLPTQTSFKESTRPNPRFSPDKI 117 KCCSTFPPPCLPTQTSFKEST PNPRFSPDKI Subject 3535 KCCSTFPPPCLPTQTSFKESTHPNPRFSPDKI 3630
Range 2: 3534 to 3632 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
77.6 bits(163) | 0.0 | 33/33(100%) | 0/33(0%) | Plus/Plus |
Query 21 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY 119 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY Subject 3534 IFCLGRIEDWGA*IP*S*FA*VDKEVETYYSTY 3632
Range 3: 3534 to 3632 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
75.3 bits(158) | 0.0 | 32/33(97%) | 0/33(0%) | Minus/Minus |
Query 21 VSAVVRFHLLVYLRKLASRNLRAPILDSPQTKY 119 VSAVVRFHLLVYLRKLASRNLR PILDSPQTKY Subject 3534 VSAVVRFHLLVYLRKLASRNLRTPILDSPQTKY 3632
Range 4: 3536 to 3631 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
74.4 bits(156) | 0.0 | 31/32(97%) | 0/32(0%) | Plus/Plus |
Query 23 ILSGENRGLGRVDSLKLVCVGRQGGGNVLQHL 118 ILSGENRGLG VDSLKLVCVGRQGGGNVLQHL Subject 3536 ILSGENRGLGCVDSLKLVCVGRQGGGNVLQHL 3631
Nucleotide Sequence (1073 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
87.2 | 489.8 | 3% | 4.259e-15 | 97% | JX559645.1 | |
87.2 | 485.2 | 4% | 4.259e-15 | 94% | NC_004667.1 | |
87.2 | 485.2 | 4% | 4.259e-15 | 94% | AF037268.2 | |
87.2 | 489.8 | 3% | 4.259e-15 | 97% | GQ352631.1 | |
87.2 | 489.8 | 3% | 4.259e-15 | 97% | GU983863.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 6
Range 1: 5404 to 5499 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
87.2 bits(184) | 0.0 | 32/32(100%) | 0/32(0%) | Plus/Minus |
Query 976 HEATLMKHGYHHYRYTPHPALRKRPHSSLSSY 1071 HEATLMKHGYHHYRYTPHPALRKRPHSSLSSY Subject 5404 HEATLMKHGYHHYRYTPHPALRKRPHSSLSSY 5499
Range 2: 5403 to 5504 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
85.8 bits(181) | 0.0 | 33/34(97%) | 0/34(0%) | Minus/Plus |
Query 971 DNLKGRSAVFFSKLGEGYTYNGGSHVSSGWPRVV 1072 DNLKGRSAVFFSKLGEGYTYNGGSHVSSGWPRV+ Subject 5403 DNLKGRSAVFFSKLGEGYTYNGGSHVSSGWPRVL 5504
Range 3: 5402 to 5500 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
84.5 bits(178) | 0.0 | 33/33(100%) | 0/33(0%) | Plus/Minus |
Query 975 TRGHPDETWLPPL*VYPSPSFEKKTALLPFKLS 1073 TRGHPDETWLPPL*VYPSPSFEKKTALLPFKLS Subject 5402 TRGHPDETWLPPL*VYPSPSFEKKTALLPFKLS 5500
Range 4: 5402 to 5500 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
81.7 bits(172) | 0.0 | 33/33(100%) | 0/33(0%) | Minus/Plus |
Query 975 R*LEREECGLFLKAG*GVYL*WW*PCFIRVASC 1073 R*LEREECGLFLKAG*GVYL*WW*PCFIRVASC Subject 5402 R*LEREECGLFLKAG*GVYL*WW*PCFIRVASC 5500
Grapevine leafroll associated virus 3, complete genome
Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 6
Range 1: 4825 to 4920 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
87.2 bits(184) | 0.0 | 32/32(100%) | 0/32(0%) | Plus/Minus |
Query 976 HEATLMKHGYHHYRYTPHPALRKRPHSSLSSY 1071 HEATLMKHGYHHYRYTPHPALRKRPHSSLSSY Subject 4825 HEATLMKHGYHHYRYTPHPALRKRPHSSLSSY 4920
Range 2: 4824 to 4925 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
84.0 bits(177) | 0.0 | 32/34(94%) | 0/34(0%) | Minus/Plus |
Query 971 DNLKGRSAVFFSKLGEGYTYNGGSHVSSGWPRVV 1072 DNLKGRSAVFFSKLGEGYTYNGGSHVSSGWPR + Subject 4824 DNLKGRSAVFFSKLGEGYTYNGGSHVSSGWPRAL 4925
Range 3: 4823 to 4918 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
82.2 bits(173) | 0.0 | 32/32(100%) | 0/32(0%) | Plus/Minus |
Query 978 RGHPDETWLPPL*VYPSPSFEKKTALLPFKLS 1073 RGHPDETWLPPL*VYPSPSFEKKTALLPFKLS Subject 4823 RGHPDETWLPPL*VYPSPSFEKKTALLPFKLS 4918
Range 4: 4823 to 4921 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
81.7 bits(172) | 0.0 | 33/33(100%) | 0/33(0%) | Minus/Plus |
Query 975 R*LEREECGLFLKAG*GVYL*WW*PCFIRVASC 1073 R*LEREECGLFLKAG*GVYL*WW*PCFIRVASC Subject 4823 R*LEREECGLFLKAG*GVYL*WW*PCFIRVASC 4921
Grapevine leafroll associated virus 3, complete genome
Sequence ID: AF037268.2 Length: 17919 Number of Matches: 6
Range 1: 4825 to 4920 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
87.2 bits(184) | 0.0 | 32/32(100%) | 0/32(0%) | Plus/Minus |
Query 976 HEATLMKHGYHHYRYTPHPALRKRPHSSLSSY 1071 HEATLMKHGYHHYRYTPHPALRKRPHSSLSSY Subject 4825 HEATLMKHGYHHYRYTPHPALRKRPHSSLSSY 4920
Range 2: 4824 to 4925 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
84.0 bits(177) | 0.0 | 32/34(94%) | 0/34(0%) | Minus/Plus |
Query 971 DNLKGRSAVFFSKLGEGYTYNGGSHVSSGWPRVV 1072 DNLKGRSAVFFSKLGEGYTYNGGSHVSSGWPR + Subject 4824 DNLKGRSAVFFSKLGEGYTYNGGSHVSSGWPRAL 4925
Range 3: 4823 to 4918 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
82.2 bits(173) | 0.0 | 32/32(100%) | 0/32(0%) | Plus/Minus |
Query 978 RGHPDETWLPPL*VYPSPSFEKKTALLPFKLS 1073 RGHPDETWLPPL*VYPSPSFEKKTALLPFKLS Subject 4823 RGHPDETWLPPL*VYPSPSFEKKTALLPFKLS 4918
Range 4: 4823 to 4921 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
81.7 bits(172) | 0.0 | 33/33(100%) | 0/33(0%) | Minus/Plus |
Query 975 R*LEREECGLFLKAG*GVYL*WW*PCFIRVASC 1073 R*LEREECGLFLKAG*GVYL*WW*PCFIRVASC Subject 4823 R*LEREECGLFLKAG*GVYL*WW*PCFIRVASC 4921
Grapevine leafroll associated virus 3 isolate 621, complete genome
Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 6
Range 1: 5404 to 5499 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
87.2 bits(184) | 0.0 | 32/32(100%) | 0/32(0%) | Plus/Minus |
Query 976 HEATLMKHGYHHYRYTPHPALRKRPHSSLSSY 1071 HEATLMKHGYHHYRYTPHPALRKRPHSSLSSY Subject 5404 HEATLMKHGYHHYRYTPHPALRKRPHSSLSSY 5499
Range 2: 5403 to 5504 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
85.8 bits(181) | 0.0 | 33/34(97%) | 0/34(0%) | Minus/Plus |
Query 971 DNLKGRSAVFFSKLGEGYTYNGGSHVSSGWPRVV 1072 DNLKGRSAVFFSKLGEGYTYNGGSHVSSGWPRV+ Subject 5403 DNLKGRSAVFFSKLGEGYTYNGGSHVSSGWPRVL 5504
Range 3: 5402 to 5500 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
84.5 bits(178) | 0.0 | 33/33(100%) | 0/33(0%) | Plus/Minus |
Query 975 TRGHPDETWLPPL*VYPSPSFEKKTALLPFKLS 1073 TRGHPDETWLPPL*VYPSPSFEKKTALLPFKLS Subject 5402 TRGHPDETWLPPL*VYPSPSFEKKTALLPFKLS 5500
Range 4: 5402 to 5500 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
81.7 bits(172) | 0.0 | 33/33(100%) | 0/33(0%) | Minus/Plus |
Query 975 R*LEREECGLFLKAG*GVYL*WW*PCFIRVASC 1073 R*LEREECGLFLKAG*GVYL*WW*PCFIRVASC Subject 5402 R*LEREECGLFLKAG*GVYL*WW*PCFIRVASC 5500
Grapevine leafroll associated virus 3 isolate WA MR, complete genome
Sequence ID: GU983863.1 Length: 18498 Number of Matches: 6
Range 1: 5404 to 5499 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
87.2 bits(184) | 0.0 | 32/32(100%) | 0/32(0%) | Plus/Minus |
Query 976 HEATLMKHGYHHYRYTPHPALRKRPHSSLSSY 1071 HEATLMKHGYHHYRYTPHPALRKRPHSSLSSY Subject 5404 HEATLMKHGYHHYRYTPHPALRKRPHSSLSSY 5499
Range 2: 5403 to 5504 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
85.8 bits(181) | 0.0 | 33/34(97%) | 0/34(0%) | Minus/Plus |
Query 971 DNLKGRSAVFFSKLGEGYTYNGGSHVSSGWPRVV 1072 DNLKGRSAVFFSKLGEGYTYNGGSHVSSGWPRV+ Subject 5403 DNLKGRSAVFFSKLGEGYTYNGGSHVSSGWPRVL 5504
Range 3: 5402 to 5500 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
84.5 bits(178) | 0.0 | 33/33(100%) | 0/33(0%) | Plus/Minus |
Query 975 TRGHPDETWLPPL*VYPSPSFEKKTALLPFKLS 1073 TRGHPDETWLPPL*VYPSPSFEKKTALLPFKLS Subject 5402 TRGHPDETWLPPL*VYPSPSFEKKTALLPFKLS 5500
Range 4: 5402 to 5500 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
81.7 bits(172) | 0.0 | 33/33(100%) | 0/33(0%) | Minus/Plus |
Query 975 R*LEREECGLFLKAG*GVYL*WW*PCFIRVASC 1073 R*LEREECGLFLKAG*GVYL*WW*PCFIRVASC Subject 5402 R*LEREECGLFLKAG*GVYL*WW*PCFIRVASC 5500
Nucleotide Sequence (378 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
192.6 | 1013.5 | 28% | 1.947e-47 | 91% | KM058745.1 | |
172.9 | 370.2 | 20% | 1.661e-41 | 45% | JX559645.1 | |
172.9 | 368.4 | 20% | 1.661e-41 | 43% | NC_004667.1 | |
172.9 | 368.4 | 20% | 1.661e-41 | 43% | AF037268.2 | |
172.9 | 370.2 | 20% | 1.661e-41 | 45% | GQ352631.1 |
Alignments
Grapevine leafroll associated virus 3 isolate GH24, complete genome
Sequence ID: KM058745.1 Length: 18493 Number of Matches: 6
Range 1: 7050 to 7289 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
192.6 bits(414) | 0.0 | 79/80(99%) | 0/80(0%) | Plus/Minus |
Query 52 NMGLLREKRVVSLLRPEKHYVRKSLPLGFMDCHNWYILPLTFKRPLHVRLLQLGHAQVNISIYLSHIVGSTYRPF**RPH 291 NMGLLREKRVVSLLRPEKHYVRKSLPLGFMDCHNWYILPLTFKRPLHVRLLQLGHAQVNISIYLSHIVGSTYRPF**R H Subject 7050 NMGLLREKRVVSLLRPEKHYVRKSLPLGFMDCHNWYILPLTFKRPLHVRLLQLGHAQVNISIYLSHIVGSTYRPF**RSH 7289
Range 2: 7056 to 7289 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
186.2 bits(400) | 0.0 | 78/78(100%) | 0/78(0%) | Minus/Plus |
Query 52 SLSKRPIGTTDDVAEIDADVYLCMTQLEKSDMKRTLKGKGKDVPVMTVHEAQGKTFANVVLFRTKKADDTLFTKQPHI 285 SLSKRPIGTTDDVAEIDADVYLCMTQLEKSDMKRTLKGKGKDVPVMTVHEAQGKTFANVVLFRTKKADDTLFTKQPHI Subject 7056 SLSKRPIGTTDDVAEIDADVYLCMTQLEKSDMKRTLKGKGKDVPVMTVHEAQGKTFANVVLFRTKKADDTLFTKQPHI 7289
Range 3: 7057 to 7320 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
182.5 bits(392) | 0.0 | 80/88(91%) | 0/88(0%) | Minus/Plus |
Query 21 LYQKGL*VLPTMWLR*MLMFTCA*PSWRSRT*RGRLKVRGRMYQL*QSMKPRGRLLRT*CFSGRRRLTTRFSRSNPIFPTLIQTHPTH 284 LYQKGL*VLPTMWLR*MLMFTCA*PSWRSRT*RGRLKVRGRMYQL*QSMKPRGRLLRT*CFSGRRRLTTRFSRSNPIF + Q H Subject 7057 LYQKGL*VLPTMWLR*MLMFTCA*PSWRSRT*RGRLKVRGRMYQL*QSMKPRGRLLRT*CFSGRRRLTTRFSRSNPIFSSAYQGTLVH 7320
Range 4: 7055 to 7288 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
161.9 bits(347) | 0.0 | 78/78(100%) | 0/78(0%) | Plus/Minus |
Query 53 IWGCFVKSVSSAFFVLKSTTFAKVFPWASWTVITGTSFPLPLSVLFMSDFSNWVMHKXXXXXXXXXXXVVPIGLFDKD 286 IWGCFVKSVSSAFFVLKSTTFAKVFPWASWTVITGTSFPLPLSVLFMSDFSNWVMHK*TSASISATSSVVPIGLFDKD Subject 7055 IWGCFVKSVSSAFFVLKSTTFAKVFPWASWTVITGTSFPLPLSVLFMSDFSNWVMHK*TSASISATSSVVPIGLFDKD 7288
Range 5: 7115 to 7306 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
150.0 bits(321) | 0.0 | 62/64(97%) | 0/64(0%) | Minus/Plus |
Query 35 LLVHDPVGEVGHEEDA*R*GEGCTSYDSP*SPGEDFCERSAFQDEEG*RHAFHEATPYSRPLSK 226 LLVHDPVGEVGHEEDA*R*GEGCTSYDSP*SPGEDFCERSAFQDEEG*RHAFHEATPYSR L K Subject 7115 LLVHDPVGEVGHEEDA*R*GEGCTSYDSP*SPGEDFCERSAFQDEEG*RHAFHEATPYSRRLIK 7306
Range 6: 7057 to 7293 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
140.4 bits(300) | 0.0 | 79/79(100%) | 0/79(0%) | Plus/Minus |
Query 48 REYGVAS*KACRQPSSS*KALRSQKSSPGLHGLS*LVHPSPYL*AXXXXXXXXXXXXXXKHQHLSQPHRR*YL*AFLIK 284 REYGVAS*KACRQPSSS*KALRSQKSSPGLHGLS*LVHPSPYL*ASSSCPTSPTGSCTSKHQHLSQPHRR*YL*AFLIK Subject 7057 REYGVAS*KACRQPSSS*KALRSQKSSPGLHGLS*LVHPSPYL*ASSSCPTSPTGSCTSKHQHLSQPHRR*YL*AFLIK 7293
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 3
Range 1: 7056 to 7289 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
172.9 bits(371) | 0.0 | 71/78(91%) | 0/78(0%) | Minus/Plus |
Query 52 SLSKRPIGTTDDVAEIDADVYLCMTQLEKSDMKRTLKGKGKDVPVMTVHEAQGKTFANVVLFRTKKADDTLFTKQPHI 285 SLSKRPIGTTDDVAEI+ADVYLCMTQLEKSDMKR+LKGKGK+ PVMTVHEAQGKTF++VVLFRTKKADD+LFTKQPHI Subject 7056 SLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHI 7289
Range 2: 7055 to 7288 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.0 bits(225) | 0.0 | 56/78(72%) | 0/78(0%) | Plus/Minus |
Query 53 IWGCFVKSVSSAFFVLKSTTFAKVFPWASWTVITGTSFPLPLSVLFMSDFSNWVMHKXXXXXXXXXXXVVPIGLFDKD 286 I GC V SSAFFVL +TT VFP AS TVITG SFP P + LF+SDFSNWVMHK TSA ISATSSVVPIGL D D Subject 7055 ICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPIGLLDSD 7288
Range 3: 7065 to 7286 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
91.3 bits(193) | 0.0 | 33/74(45%) | 0/74(0%) | Plus/Minus |
Query 55 MGLLREKRVVSLLRPEKHYVRKSLPLGFMDCHNWYILPLTFKRPLHVRLLQLGHAQVNISIYLSHIVGSTYRPF 276 M L E V+ LLRP+++++ + L FM CH+W + +RPLH+RLLQLGHAQV++S+Y S+++ + PF Subject 7065 MRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVSVYFSYVISGSNWPF 7286
Grapevine leafroll associated virus 3, complete genome
Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 3
Range 1: 6477 to 6710 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
172.9 bits(371) | 0.0 | 71/78(91%) | 0/78(0%) | Minus/Plus |
Query 52 SLSKRPIGTTDDVAEIDADVYLCMTQLEKSDMKRTLKGKGKDVPVMTVHEAQGKTFANVVLFRTKKADDTLFTKQPHI 285 SLSKRPIGTTDDVAEI+ADVYLCMTQLEKSDMKR+LKGKGK+ PVMTVHEAQGKTF++VVLFRTKKADD+LFTKQPHI Subject 6477 SLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHI 6710
Range 2: 6476 to 6709 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.0 bits(225) | 0.0 | 56/78(72%) | 0/78(0%) | Plus/Minus |
Query 53 IWGCFVKSVSSAFFVLKSTTFAKVFPWASWTVITGTSFPLPLSVLFMSDFSNWVMHKXXXXXXXXXXXVVPIGLFDKD 286 I GC V SSAFFVL +TT VFP AS TVITG SFP P + LF+SDFSNWVMHK TSA ISATSSVVPIGL D D Subject 6476 ICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPIGLLDSD 6709
Range 3: 6486 to 6707 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
89.5 bits(189) | 0.0 | 32/74(43%) | 0/74(0%) | Plus/Minus |
Query 55 MGLLREKRVVSLLRPEKHYVRKSLPLGFMDCHNWYILPLTFKRPLHVRLLQLGHAQVNISIYLSHIVGSTYRPF 276 M L E V+ LRP+++++ + L FM CH+W + +RPLH+RLLQLGHAQV++S+Y S+++ + PF Subject 6486 MRLFSE*GVIGFLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVSVYFSYVISGSNWPF 6707
Grapevine leafroll associated virus 3, complete genome
Sequence ID: AF037268.2 Length: 17919 Number of Matches: 3
Range 1: 6477 to 6710 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
172.9 bits(371) | 0.0 | 71/78(91%) | 0/78(0%) | Minus/Plus |
Query 52 SLSKRPIGTTDDVAEIDADVYLCMTQLEKSDMKRTLKGKGKDVPVMTVHEAQGKTFANVVLFRTKKADDTLFTKQPHI 285 SLSKRPIGTTDDVAEI+ADVYLCMTQLEKSDMKR+LKGKGK+ PVMTVHEAQGKTF++VVLFRTKKADD+LFTKQPHI Subject 6477 SLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHI 6710
Range 2: 6476 to 6709 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.0 bits(225) | 0.0 | 56/78(72%) | 0/78(0%) | Plus/Minus |
Query 53 IWGCFVKSVSSAFFVLKSTTFAKVFPWASWTVITGTSFPLPLSVLFMSDFSNWVMHKXXXXXXXXXXXVVPIGLFDKD 286 I GC V SSAFFVL +TT VFP AS TVITG SFP P + LF+SDFSNWVMHK TSA ISATSSVVPIGL D D Subject 6476 ICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPIGLLDSD 6709
Range 3: 6486 to 6707 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
89.5 bits(189) | 0.0 | 32/74(43%) | 0/74(0%) | Plus/Minus |
Query 55 MGLLREKRVVSLLRPEKHYVRKSLPLGFMDCHNWYILPLTFKRPLHVRLLQLGHAQVNISIYLSHIVGSTYRPF 276 M L E V+ LRP+++++ + L FM CH+W + +RPLH+RLLQLGHAQV++S+Y S+++ + PF Subject 6486 MRLFSE*GVIGFLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVSVYFSYVISGSNWPF 6707
Grapevine leafroll associated virus 3 isolate 621, complete genome
Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 3
Range 1: 7056 to 7289 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
172.9 bits(371) | 0.0 | 71/78(91%) | 0/78(0%) | Minus/Plus |
Query 52 SLSKRPIGTTDDVAEIDADVYLCMTQLEKSDMKRTLKGKGKDVPVMTVHEAQGKTFANVVLFRTKKADDTLFTKQPHI 285 SLSKRPIGTTDDVAEI+ADVYLCMTQLEKSDMKR+LKGKGK+ PVMTVHEAQGKTF++VVLFRTKKADD+LFTKQPHI Subject 7056 SLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHI 7289
Range 2: 7055 to 7288 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.0 bits(225) | 0.0 | 56/78(72%) | 0/78(0%) | Plus/Minus |
Query 53 IWGCFVKSVSSAFFVLKSTTFAKVFPWASWTVITGTSFPLPLSVLFMSDFSNWVMHKXXXXXXXXXXXVVPIGLFDKD 286 I GC V SSAFFVL +TT VFP AS TVITG SFP P + LF+SDFSNWVMHK TSA ISATSSVVPIGL D D Subject 7055 ICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPIGLLDSD 7288
Range 3: 7065 to 7286 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
91.3 bits(193) | 0.0 | 33/74(45%) | 0/74(0%) | Plus/Minus |
Query 55 MGLLREKRVVSLLRPEKHYVRKSLPLGFMDCHNWYILPLTFKRPLHVRLLQLGHAQVNISIYLSHIVGSTYRPF 276 M L E V+ LLRP+++++ + L FM CH+W + +RPLH+RLLQLGHAQV++S+Y S+++ + PF Subject 7065 MRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVSVYFSYVISGSNWPF 7286
Nucleotide Sequence (324 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
270.5 | 1386.8 | 39% | 5.204e-71 | 96% | KJ174518.1 | |
270.0 | 1397.5 | 46% | 7.149e-71 | 99% | KX701860.1 | |
267.7 | 1375.4 | 39% | 3.499e-70 | 97% | GQ352632.1 | |
267.3 | 1398.0 | 46% | 4.807e-70 | 99% | EU259806.1 | |
262.2 | 1368.0 | 39% | 1.582e-68 | 94% | KX756668.1 |
Alignments
Grapevine leafroll associated virus 3, complete genome
Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 8
Range 1: 3944 to 4264 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
270.5 bits(584) | 0.0 | 106/107(99%) | 0/107(0%) | Plus/Plus |
Query 2 AYWDFCGVFGCGPCCMEVQARNCGLRQKICGQ*LRNSKLIEFSSRWWFTRYNR*HSIRRVICCAKRVFVGCGRHQGDRS*TSSPLSAVIVFYLIRHFRLQYARHLGT 322 AYWDFCGVFGCGPCCMEVQARNCGLRQKICGQ*LRNSKLIEFSSRWWFTRYNR*HSIRRVICCAKRVFVGCGRHQGDRS*TSSPLSAVIVFYLI HFRLQYARHLGT Subject 3944 AYWDFCGVFGCGPCCMEVQARNCGLRQKICGQ*LRNSKLIEFSSRWWFTRYNR*HSIRRVICCAKRVFVGCGRHQGDRS*TSSPLSAVIVFYLIHHFRLQYARHLGT 4264
Range 2: 3943 to 4266 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
262.7 bits(567) | 0.0 | 107/108(99%) | 0/108(0%) | Minus/Minus |
Query 1 RVPKCLAYCSRKWRMR*KTITALRGLDV*LRSPW*RPQPTKTLFAQQMTRRILC*RLYRVNHQRLENSMSLEFRNYCPHIFWRKPQFRACTSMQQGPHPKTPQKSQ*A 324 RVPKCLAYCSRKW MR*KTITALRGLDV*LRSPW*RPQPTKTLFAQQMTRRILC*RLYRVNHQRLENSMSLEFRNYCPHIFWRKPQFRACTSMQQGPHPKTPQKSQ*A Subject 3943 RVPKCLAYCSRKWCMR*KTITALRGLDV*LRSPW*RPQPTKTLFAQQMTRRILC*RLYRVNHQRLENSMSLEFRNYCPHIFWRKPQFRACTSMQQGPHPKTPQKSQ*A 4266
Range 3: 3943 to 4266 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
262.2 bits(566) | 0.0 | 107/108(99%) | 0/108(0%) | Plus/Plus |
Query 1 CLLGFLWRLWVRPLLHGSTGAELRLTPEDMRAVVTKL*AH*VLKPLVVYAV*PLAQYPAGHLLCEEGFRRLWPSPGRP*LNVKSP*RCYRFLPHTPFPAAVC*AFGHT 324 CLLGFLWRLWVRPLLHGSTGAELRL PEDMRAVVTKL*AH*VLKPLVVYAV*PLAQYPAGHLLCEEGFRRLWPSPGRP*LNVKSP*RCYRFLPHTPFPAAVC*AFGHT Subject 3943 CLLGFLWRLWVRPLLHGSTGAELRLAPEDMRAVVTKL*AH*VLKPLVVYAV*PLAQYPAGHLLCEEGFRRLWPSPGRP*LNVKSP*RCYRFLPHTPFPAAVC*AFGHT 4266
Range 4: 3945 to 4265 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
249.0 bits(537) | 0.0 | 106/107(99%) | 0/107(0%) | Minus/Minus |
Query 3 VCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPGDGHSRRKPSSHNK*PAGYCASGYTA*TTSGLRTQ*A*SFVTTARISSGVSRNSAPVLPCNRGRTQRRHKNPNK 323 VCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPGDGHSRRKPSSHNK*PAGYCASGYTA*TTSGLRTQ*A*SFVTTARISSG SRNSAPVLPCNRGRTQRRHKNPNK Subject 3945 VCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPGDGHSRRKPSSHNK*PAGYCASGYTA*TTSGLRTQ*A*SFVTTARISSGASRNSAPVLPCNRGRTQRRHKNPNK 4265
Range 5: 3944 to 4150 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
129.8 bits(277) | 0.0 | 68/69(99%) | 0/69(0%) | Minus/Minus |
Query 2 DENPLRTTNDPPDTVLAVIPRKPPAA*ELNELRVSXXXXXXXXXXXAIPRLYFHATGAAPKDATKIPIS 208 DENPLRTTNDPPDTVLAVIPRKPPAA*ELNELRVS*LLPAYLLA AAIPRLYFHATGAAPKDATKIPIS Subject 3944 DENPLRTTNDPPDTVLAVIPRKPPAA*ELNELRVS*LLPAYLLAQAAIPRLYFHATGAAPKDATKIPIS 4150
Range 6: 4193 to 4264 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
58.8 bits(122) | 0.0 | 23/24(96%) | 0/24(0%) | Minus/Minus |
Query 251 CAQMPSILQPEMAYEVENDNSAKG 322 CAQMPSILQPEM YEVENDNSAKG Subject 4193 CAQMPSILQPEMVYEVENDNSAKG 4264
Range 7: 4071 to 4265 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.0 bits(238) | 0.0 | 64/65(98%) | 0/65(0%) | Plus/Plus |
Query 129 QAAGGLRGITASTVSGGSFVVRRGFSSXXXXXXXXXXXXXXPLALLSFSTSYAISGCSMLGIWAH 323 QAAGGLRGITASTVSGGSFVVRRGFSSAVAVTRATVAKRQVPLALLSFSTSY ISGCSMLGIWAH Subject 4071 QAAGGLRGITASTVSGGSFVVRRGFSSAVAVTRATVAKRQVPLALLSFSTSYTISGCSMLGIWAH 4265
Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome
Sequence ID: KX701860.1 Length: 18020 Number of Matches: 9
Range 1: 3462 to 3782 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
270.0 bits(583) | 0.0 | 106/107(99%) | 0/107(0%) | Plus/Plus |
Query 2 AYWDFCGVFGCGPCCMEVQARNCGLRQKICGQ*LRNSKLIEFSSRWWFTRYNR*HSIRRVICCAKRVFVGCGRHQGDRS*TSSPLSAVIVFYLIRHFRLQYARHLGT 322 AYWDFCGVFGC PCCMEVQARNCGLRQKICGQ*LRNSKLIEFSSRWWFTRYNR*HSIRRVICCAKRVFVGCGRHQGDRS*TSSPLSAVIVFYLIRHFRLQYARHLGT Subject 3462 AYWDFCGVFGCSPCCMEVQARNCGLRQKICGQ*LRNSKLIEFSSRWWFTRYNR*HSIRRVICCAKRVFVGCGRHQGDRS*TSSPLSAVIVFYLIRHFRLQYARHLGT 3782
Range 2: 3461 to 3784 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
262.7 bits(567) | 0.0 | 107/108(99%) | 0/108(0%) | Plus/Plus |
Query 1 CLLGFLWRLWVRPLLHGSTGAELRLTPEDMRAVVTKL*AH*VLKPLVVYAV*PLAQYPAGHLLCEEGFRRLWPSPGRP*LNVKSP*RCYRFLPHTPFPAAVC*AFGHT 324 CLLGFLWRLWV+PLLHGSTGAELRLTPEDMRAVVTKL*AH*VLKPLVVYAV*PLAQYPAGHLLCEEGFRRLWPSPGRP*LNVKSP*RCYRFLPHTPFPAAVC*AFGHT Subject 3461 CLLGFLWRLWVQPLLHGSTGAELRLTPEDMRAVVTKL*AH*VLKPLVVYAV*PLAQYPAGHLLCEEGFRRLWPSPGRP*LNVKSP*RCYRFLPHTPFPAAVC*AFGHT 3784
Range 3: 3461 to 3784 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
261.8 bits(565) | 0.0 | 107/108(99%) | 0/108(0%) | Minus/Minus |
Query 1 RVPKCLAYCSRKWRMR*KTITALRGLDV*LRSPW*RPQPTKTLFAQQMTRRILC*RLYRVNHQRLENSMSLEFRNYCPHIFWRKPQFRACTSMQQGPHPKTPQKSQ*A 324 RVPKCLAYCSRKWRMR*KTITALRGLDV*LRSPW*RPQPTKTLFAQQMTRRILC*RLYRVNHQRLENSMSLEFRNYCPHIFWRKPQFRACTSMQQG HPKTPQKSQ*A Subject 3461 RVPKCLAYCSRKWRMR*KTITALRGLDV*LRSPW*RPQPTKTLFAQQMTRRILC*RLYRVNHQRLENSMSLEFRNYCPHIFWRKPQFRACTSMQQGLHPKTPQKSQ*A 3784
Range 4: 3463 to 3783 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
247.1 bits(533) | 0.0 | 106/107(99%) | 0/107(0%) | Minus/Minus |
Query 3 VCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPGDGHSRRKPSSHNK*PAGYCASGYTA*TTSGLRTQ*A*SFVTTARISSGVSRNSAPVLPCNRGRTQRRHKNPNK 323 VCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPGDGHSRRKPSSHNK*PAGYCASGYTA*TTSGLRTQ*A*SFVTTARISSGVSRNSAPVLPCNRG TQRRHKNPNK Subject 3463 VCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPGDGHSRRKPSSHNK*PAGYCASGYTA*TTSGLRTQ*A*SFVTTARISSGVSRNSAPVLPCNRGCTQRRHKNPNK 3783
Range 5: 3564 to 3668 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
84.0 bits(177) | 0.0 | 35/35(100%) | 0/35(0%) | Minus/Minus |
Query 104 DENPLRTTNDPPDTVLAVIPRKPPAA*ELNELRVS 208 DENPLRTTNDPPDTVLAVIPRKPPAA*ELNELRVS Subject 3564 DENPLRTTNDPPDTVLAVIPRKPPAA*ELNELRVS 3668
Range 6: 3711 to 3782 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
60.6 bits(126) | 0.0 | 24/24(100%) | 0/24(0%) | Minus/Minus |
Query 251 CAQMPSILQPEMAYEVENDNSAKG 322 CAQMPSILQPEMAYEVENDNSAKG Subject 3711 CAQMPSILQPEMAYEVENDNSAKG 3782
Range 7: 3462 to 3527 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
55.6 bits(115) | 0.0 | 22/22(100%) | 0/22(0%) | Minus/Minus |
Query 2 IPRLYFHATGAAPKDATKIPIS 67 IPRLYFHATGAAPKDATKIPIS Subject 3462 IPRLYFHATGAAPKDATKIPIS 3527
Range 8: 3589 to 3783 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
113.8 bits(242) | 0.0 | 65/65(100%) | 0/65(0%) | Plus/Plus |
Query 129 QAAGGLRGITASTVSGGSFVVRRGFSSXXXXXXXXXXXXXXPLALLSFSTSYAISGCSMLGIWAH 323 QAAGGLRGITASTVSGGSFVVRRGFSSAVAVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAH Subject 3589 QAAGGLRGITASTVSGGSFVVRRGFSSAVAVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAH 3783
Grapevine leafroll associated virus 3 isolate 623, complete genome
Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 8
Range 1: 3944 to 4264 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
267.7 bits(578) | 0.0 | 105/107(98%) | 0/107(0%) | Plus/Plus |
Query 2 AYWDFCGVFGCGPCCMEVQARNCGLRQKICGQ*LRNSKLIEFSSRWWFTRYNR*HSIRRVICCAKRVFVGCGRHQGDRS*TSSPLSAVIVFYLIRHFRLQYARHLGT 322 AYWDFCGVFGCGPCC+EVQARNCG RQKICGQ*LRNSKLIEFSSRWWFTRYNR*HSIRRVICCAKRVFVGCGRHQGDRS*TSSPLSAVIVFYLIRHFRLQYARHLGT Subject 3944 AYWDFCGVFGCGPCCLEVQARNCG*RQKICGQ*LRNSKLIEFSSRWWFTRYNR*HSIRRVICCAKRVFVGCGRHQGDRS*TSSPLSAVIVFYLIRHFRLQYARHLGT 4264
Range 2: 3943 to 4266 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
259.5 bits(560) | 0.0 | 107/108(99%) | 0/108(0%) | Plus/Plus |
Query 1 CLLGFLWRLWVRPLLHGSTGAELRLTPEDMRAVVTKL*AH*VLKPLVVYAV*PLAQYPAGHLLCEEGFRRLWPSPGRP*LNVKSP*RCYRFLPHTPFPAAVC*AFGHT 324 CLLGFLWRLWVRPLL GSTGAELRLTPEDMRAVVTKL*AH*VLKPLVVYAV*PLAQYPAGHLLCEEGFRRLWPSPGRP*LNVKSP*RCYRFLPHTPFPAAVC*AFGHT Subject 3943 CLLGFLWRLWVRPLLLGSTGAELRLTPEDMRAVVTKL*AH*VLKPLVVYAV*PLAQYPAGHLLCEEGFRRLWPSPGRP*LNVKSP*RCYRFLPHTPFPAAVC*AFGHT 4266
Range 3: 3943 to 4266 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
259.5 bits(560) | 0.0 | 106/108(98%) | 0/108(0%) | Minus/Minus |
Query 1 RVPKCLAYCSRKWRMR*KTITALRGLDV*LRSPW*RPQPTKTLFAQQMTRRILC*RLYRVNHQRLENSMSLEFRNYCPHIFWRKPQFRACTSMQQGPHPKTPQKSQ*A 324 RVPKCLAYCSRKWRMR*KTITALRGLDV*LRSPW*RPQPTKTLFAQQMTRRILC*RLYRVNHQRLENSMSLEFRNYCPHIFWR PQFRACTS QQGPHPKTPQKSQ*A Subject 3943 RVPKCLAYCSRKWRMR*KTITALRGLDV*LRSPW*RPQPTKTLFAQQMTRRILC*RLYRVNHQRLENSMSLEFRNYCPHIFWR*PQFRACTSKQQGPHPKTPQKSQ*A 4266
Range 4: 3945 to 4265 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
246.2 bits(531) | 0.0 | 106/107(99%) | 0/107(0%) | Minus/Minus |
Query 3 VCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPGDGHSRRKPSSHNK*PAGYCASGYTA*TTSGLRTQ*A*SFVTTARISSGVSRNSAPVLPCNRGRTQRRHKNPNK 323 VCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPGDGHSRRKPSSHNK*PAGYCASGYTA*TTSGLRTQ*A*SFVTTARISSGVSRNSAPVLP NRGRTQRRHKNPNK Subject 3945 VCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPGDGHSRRKPSSHNK*PAGYCASGYTA*TTSGLRTQ*A*SFVTTARISSGVSRNSAPVLPSNRGRTQRRHKNPNK 4265
Range 5: 3944 to 4150 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
126.2 bits(269) | 0.0 | 67/69(97%) | 0/69(0%) | Minus/Minus |
Query 2 DENPLRTTNDPPDTVLAVIPRKPPAA*ELNELRVSXXXXXXXXXXXAIPRLYFHATGAAPKDATKIPIS 208 DENPLRTTNDPPDTVLAVIPRKPPAA*ELNELRVS*LLPAYLLA AAIPRLYF ATGAAPKDATKIPIS Subject 3944 DENPLRTTNDPPDTVLAVIPRKPPAA*ELNELRVS*LLPAYLLALAAIPRLYFQATGAAPKDATKIPIS 4150
Range 6: 4193 to 4264 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
60.6 bits(126) | 0.0 | 24/24(100%) | 0/24(0%) | Minus/Minus |
Query 251 CAQMPSILQPEMAYEVENDNSAKG 322 CAQMPSILQPEMAYEVENDNSAKG Subject 4193 CAQMPSILQPEMAYEVENDNSAKG 4264
Range 7: 4071 to 4265 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
113.8 bits(242) | 0.0 | 65/65(100%) | 0/65(0%) | Plus/Plus |
Query 129 QAAGGLRGITASTVSGGSFVVRRGFSSXXXXXXXXXXXXXXPLALLSFSTSYAISGCSMLGIWAH 323 QAAGGLRGITASTVSGGSFVVRRGFSSAVAVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAH Subject 4071 QAAGGLRGITASTVSGGSFVVRRGFSSAVAVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAH 4265
Grapevine leafroll associated virus 3 isolate GP18, complete genome
Sequence ID: EU259806.1 Length: 18498 Number of Matches: 9
Range 1: 3944 to 4264 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
267.3 bits(577) | 0.0 | 106/107(99%) | 0/107(0%) | Plus/Plus |
Query 2 AYWDFCGVFGCGPCCMEVQARNCGLRQKICGQ*LRNSKLIEFSSRWWFTRYNR*HSIRRVICCAKRVFVGCGRHQGDRS*TSSPLSAVIVFYLIRHFRLQYARHLGT 322 AYWDFCGVFGCGPCCMEVQARN GLRQKICGQ*LRNSKLIEFSSRWWFTRYNR*HSIRRVICCAKRVFVGCGRHQGDRS*TSSPLSAVIVFYLIRHFRLQYARHLGT Subject 3944 AYWDFCGVFGCGPCCMEVQARNRGLRQKICGQ*LRNSKLIEFSSRWWFTRYNR*HSIRRVICCAKRVFVGCGRHQGDRS*TSSPLSAVIVFYLIRHFRLQYARHLGT 4264
Range 2: 3943 to 4266 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
264.5 bits(571) | 0.0 | 107/108(99%) | 0/108(0%) | Minus/Minus |
Query 1 RVPKCLAYCSRKWRMR*KTITALRGLDV*LRSPW*RPQPTKTLFAQQMTRRILC*RLYRVNHQRLENSMSLEFRNYCPHIFWRKPQFRACTSMQQGPHPKTPQKSQ*A 324 RVPKCLAYCSRKWRMR*KTITALRGLDV*LRSPW*RPQPTKTLFAQQMTRRILC*RLYRVNHQRLENSMSLEFRNYCPHIFWRKP+FRACTSMQQGPHPKTPQKSQ*A Subject 3943 RVPKCLAYCSRKWRMR*KTITALRGLDV*LRSPW*RPQPTKTLFAQQMTRRILC*RLYRVNHQRLENSMSLEFRNYCPHIFWRKPRFRACTSMQQGPHPKTPQKSQ*A 4266
Range 3: 3943 to 4266 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
261.8 bits(565) | 0.0 | 107/108(99%) | 0/108(0%) | Plus/Plus |
Query 1 CLLGFLWRLWVRPLLHGSTGAELRLTPEDMRAVVTKL*AH*VLKPLVVYAV*PLAQYPAGHLLCEEGFRRLWPSPGRP*LNVKSP*RCYRFLPHTPFPAAVC*AFGHT 324 CLLGFLWRLWVRPLLHGSTGAE RLTPEDMRAVVTKL*AH*VLKPLVVYAV*PLAQYPAGHLLCEEGFRRLWPSPGRP*LNVKSP*RCYRFLPHTPFPAAVC*AFGHT Subject 3943 CLLGFLWRLWVRPLLHGSTGAESRLTPEDMRAVVTKL*AH*VLKPLVVYAV*PLAQYPAGHLLCEEGFRRLWPSPGRP*LNVKSP*RCYRFLPHTPFPAAVC*AFGHT 4266
Range 4: 3945 to 4265 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
248.5 bits(536) | 0.0 | 106/107(99%) | 0/107(0%) | Minus/Minus |
Query 3 VCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPGDGHSRRKPSSHNK*PAGYCASGYTA*TTSGLRTQ*A*SFVTTARISSGVSRNSAPVLPCNRGRTQRRHKNPNK 323 VCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPGDGHSRRKPSSHNK*PAGYCASGYTA*TTSGLRTQ*A*SFVTTARISSGVSR+SAPVLPCNRGRTQRRHKNPNK Subject 3945 VCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPGDGHSRRKPSSHNK*PAGYCASGYTA*TTSGLRTQ*A*SFVTTARISSGVSRDSAPVLPCNRGRTQRRHKNPNK 4265
Range 5: 4046 to 4150 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
84.0 bits(177) | 0.0 | 35/35(100%) | 0/35(0%) | Minus/Minus |
Query 104 DENPLRTTNDPPDTVLAVIPRKPPAA*ELNELRVS 208 DENPLRTTNDPPDTVLAVIPRKPPAA*ELNELRVS Subject 4046 DENPLRTTNDPPDTVLAVIPRKPPAA*ELNELRVS 4150
Range 6: 4193 to 4264 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
60.6 bits(126) | 0.0 | 24/24(100%) | 0/24(0%) | Minus/Minus |
Query 251 CAQMPSILQPEMAYEVENDNSAKG 322 CAQMPSILQPEMAYEVENDNSAKG Subject 4193 CAQMPSILQPEMAYEVENDNSAKG 4264
Range 7: 3944 to 4009 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
55.6 bits(115) | 0.0 | 22/22(100%) | 0/22(0%) | Minus/Minus |
Query 2 IPRLYFHATGAAPKDATKIPIS 67 IPRLYFHATGAAPKDATKIPIS Subject 3944 IPRLYFHATGAAPKDATKIPIS 4009
Range 8: 4071 to 4265 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
113.8 bits(242) | 0.0 | 65/65(100%) | 0/65(0%) | Plus/Plus |
Query 129 QAAGGLRGITASTVSGGSFVVRRGFSSXXXXXXXXXXXXXXPLALLSFSTSYAISGCSMLGIWAH 323 QAAGGLRGITASTVSGGSFVVRRGFSSAVAVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAH Subject 4071 QAAGGLRGITASTVSGGSFVVRRGFSSAVAVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAH 4265
Grapevine leafroll associated virus 3 isolate TC BR, complete genome
Sequence ID: KX756668.1 Length: 18498 Number of Matches: 8
Range 1: 3944 to 4264 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
262.2 bits(566) | 0.0 | 105/107(98%) | 0/107(0%) | Plus/Plus |
Query 2 AYWDFCGVFGCGPCCMEVQARNCGLRQKICGQ*LRNSKLIEFSSRWWFTRYNR*HSIRRVICCAKRVFVGCGRHQGDRS*TSSPLSAVIVFYLIRHFRLQYARHLGT 322 A WDFCGVFGCGPCCMEVQARNCGLRQKICGQ*LRNSKLIEFSSR WFTRYNR*HSIRRVICCAKRVFVGCGRHQGDRS*TSSPLSAVIVFYLIRHFRLQYARHLGT Subject 3944 ASWDFCGVFGCGPCCMEVQARNCGLRQKICGQ*LRNSKLIEFSSRRWFTRYNR*HSIRRVICCAKRVFVGCGRHQGDRS*TSSPLSAVIVFYLIRHFRLQYARHLGT 4264
Range 2: 3949 to 4266 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
262.2 bits(566) | 0.0 | 105/106(99%) | 0/106(0%) | Minus/Minus |
Query 7 RVPKCLAYCSRKWRMR*KTITALRGLDV*LRSPW*RPQPTKTLFAQQMTRRILC*RLYRVNHQRLENSMSLEFRNYCPHIFWRKPQFRACTSMQQGPHPKTPQKSQ 324 RVPKCLAYCSRKWRMR*KTITALRGLDV*LRSPW*RPQPTKTLFAQQMTRRILC*RLYRVNH+RLENSMSLEFRNYCPHIFWRKPQFRACTSMQQGPHPKTPQKSQ Subject 3949 RVPKCLAYCSRKWRMR*KTITALRGLDV*LRSPW*RPQPTKTLFAQQMTRRILC*RLYRVNHRRLENSMSLEFRNYCPHIFWRKPQFRACTSMQQGPHPKTPQKSQ 4266
Range 3: 3943 to 4266 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
257.2 bits(555) | 0.0 | 105/108(97%) | 0/108(0%) | Plus/Plus |
Query 1 CLLGFLWRLWVRPLLHGSTGAELRLTPEDMRAVVTKL*AH*VLKPLVVYAV*PLAQYPAGHLLCEEGFRRLWPSPGRP*LNVKSP*RCYRFLPHTPFPAAVC*AFGHT 324 C LGFLWRLWVRPLLHGSTGAELRLTPEDMRAVV KL*AH*VLKP VVYAV*PLAQYPAGHLLCEEGFRRLWPSPGRP*LNVKSP*RCYRFLPHTPFPAAVC*AFGHT Subject 3943 CFLGFLWRLWVRPLLHGSTGAELRLTPEDMRAVVAKL*AH*VLKPPVVYAV*PLAQYPAGHLLCEEGFRRLWPSPGRP*LNVKSP*RCYRFLPHTPFPAAVC*AFGHT 4266
Range 4: 3945 to 4265 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
244.4 bits(527) | 0.0 | 104/107(97%) | 0/107(0%) | Minus/Minus |
Query 3 VCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPGDGHSRRKPSSHNK*PAGYCASGYTA*TTSGLRTQ*A*SFVTTARISSGVSRNSAPVLPCNRGRTQRRHKNPNK 323 VCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPGDGHSRRKPSSHNK*PAGYCASGYTA*TT GLRTQ*A*SF TTARISSGVSRNSAPVLPCNRGRTQRRHKNP K Subject 3945 VCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPGDGHSRRKPSSHNK*PAGYCASGYTA*TTGGLRTQ*A*SFATTARISSGVSRNSAPVLPCNRGRTQRRHKNPKK 4265
Range 5: 3944 to 4150 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
126.6 bits(270) | 0.0 | 67/69(97%) | 0/69(0%) | Minus/Minus |
Query 2 DENPLRTTNDPPDTVLAVIPRKPPAA*ELNELRVSXXXXXXXXXXXAIPRLYFHATGAAPKDATKIPIS 208 DENPLRTTNDPPDTVLAVIPRKPPAA*ELNELRVS LLPAYLLA*AAIPRLYFHATGAAPKDATKIP S Subject 3944 DENPLRTTNDPPDTVLAVIPRKPPAA*ELNELRVSQLLPAYLLA*AAIPRLYFHATGAAPKDATKIPRS 4150
Range 6: 4193 to 4264 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
60.6 bits(126) | 0.0 | 24/24(100%) | 0/24(0%) | Minus/Minus |
Query 251 CAQMPSILQPEMAYEVENDNSAKG 322 CAQMPSILQPEMAYEVENDNSAKG Subject 4193 CAQMPSILQPEMAYEVENDNSAKG 4264
Range 7: 4071 to 4265 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
113.8 bits(242) | 0.0 | 65/65(100%) | 0/65(0%) | Plus/Plus |
Query 129 QAAGGLRGITASTVSGGSFVVRRGFSSXXXXXXXXXXXXXXPLALLSFSTSYAISGCSMLGIWAH 323 QAAGGLRGITASTVSGGSFVVRRGFSSAVAVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAH Subject 4071 QAAGGLRGITASTVSGGSFVVRRGFSSAVAVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAH 4265
Nucleotide Sequence (449 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
314.9 | 1856.7 | 31% | 3.765e-84 | 99% | JX559645.1 | |
314.9 | 1856.7 | 31% | 3.765e-84 | 99% | GQ352631.1 | |
314.9 | 1856.7 | 31% | 3.765e-84 | 99% | GU983863.1 | |
314.9 | 1856.7 | 31% | 3.765e-84 | 99% | EU344893.1 | |
314.9 | 1846.1 | 31% | 3.765e-84 | 99% | KX756669.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 6
Range 1: 12746 to 13150 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
314.9 bits(681) | 0.0 | 134/135(99%) | 0/135(0%) | Minus/Plus |
Query 7 FR*GSMWT*RRI*KVRSCR*KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTLP 411 FR*GSMWT*RRI*KVRSCR*KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRT P Subject 12746 FR*GSMWT*RRI*KVRSCR*KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTHP 13150
Range 2: 12748 to 13149 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
314.0 bits(679) | 0.0 | 133/134(99%) | 0/134(0%) | Plus/Minus |
Query 8 GSVLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPYL 409 G VLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPYL Subject 12748 GCVLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPYL 13149
Range 3: 12744 to 13151 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
313.1 bits(677) | 0.0 | 135/136(99%) | 0/136(0%) | Minus/Plus |
Query 6 GSGREVCGRNAEFRKYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHSR 413 GSGREVCGRNAEFRKYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGH+R Subject 12744 GSGREVCGRNAEFRKYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTR 13151
Range 4: 12757 to 13155 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
309.9 bits(670) | 0.0 | 133/133(100%) | 0/133(0%) | Minus/Plus |
Query 2 KYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGG 400 KYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGG Subject 12757 KYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGG 13155
Range 5: 12756 to 13154 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
302.6 bits(654) | 0.0 | 133/133(100%) | 0/133(0%) | Plus/Minus |
Query 3 PPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYF 401 PPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYF Subject 12756 PPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYF 13154
Range 6: 12743 to 13150 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
302.1 bits(653) | 0.0 | 135/136(99%) | 0/136(0%) | Plus/Minus |
Query 7 RECPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYFLNSALRPHTSLPEP 414 R CPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYFLNSALRPHTSLPEP Subject 12743 RVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYFLNSALRPHTSLPEP 13150
Grapevine leafroll associated virus 3 isolate 621, complete genome
Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 6
Range 1: 12746 to 13150 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
314.9 bits(681) | 0.0 | 134/135(99%) | 0/135(0%) | Minus/Plus |
Query 7 FR*GSMWT*RRI*KVRSCR*KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTLP 411 FR*GSMWT*RRI*KVRSCR*KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRT P Subject 12746 FR*GSMWT*RRI*KVRSCR*KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTHP 13150
Range 2: 12748 to 13149 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
314.0 bits(679) | 0.0 | 133/134(99%) | 0/134(0%) | Plus/Minus |
Query 8 GSVLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPYL 409 G VLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPYL Subject 12748 GCVLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPYL 13149
Range 3: 12744 to 13151 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
313.1 bits(677) | 0.0 | 135/136(99%) | 0/136(0%) | Minus/Plus |
Query 6 GSGREVCGRNAEFRKYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHSR 413 GSGREVCGRNAEFRKYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGH+R Subject 12744 GSGREVCGRNAEFRKYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTR 13151
Range 4: 12757 to 13155 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
309.9 bits(670) | 0.0 | 133/133(100%) | 0/133(0%) | Minus/Plus |
Query 2 KYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGG 400 KYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGG Subject 12757 KYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGG 13155
Range 5: 12756 to 13154 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
302.6 bits(654) | 0.0 | 133/133(100%) | 0/133(0%) | Plus/Minus |
Query 3 PPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYF 401 PPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYF Subject 12756 PPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYF 13154
Range 6: 12743 to 13150 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
302.1 bits(653) | 0.0 | 135/136(99%) | 0/136(0%) | Plus/Minus |
Query 7 RECPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYFLNSALRPHTSLPEP 414 R CPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYFLNSALRPHTSLPEP Subject 12743 RVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYFLNSALRPHTSLPEP 13150
Grapevine leafroll associated virus 3 isolate WA MR, complete genome
Sequence ID: GU983863.1 Length: 18498 Number of Matches: 6
Range 1: 12746 to 13150 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
314.9 bits(681) | 0.0 | 134/135(99%) | 0/135(0%) | Minus/Plus |
Query 7 FR*GSMWT*RRI*KVRSCR*KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTLP 411 FR*GSMWT*RRI*KVRSCR*KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRT P Subject 12746 FR*GSMWT*RRI*KVRSCR*KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTHP 13150
Range 2: 12748 to 13149 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
314.0 bits(679) | 0.0 | 133/134(99%) | 0/134(0%) | Plus/Minus |
Query 8 GSVLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPYL 409 G VLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPYL Subject 12748 GCVLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPYL 13149
Range 3: 12744 to 13151 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
313.1 bits(677) | 0.0 | 135/136(99%) | 0/136(0%) | Minus/Plus |
Query 6 GSGREVCGRNAEFRKYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHSR 413 GSGREVCGRNAEFRKYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGH+R Subject 12744 GSGREVCGRNAEFRKYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTR 13151
Range 4: 12757 to 13155 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
309.9 bits(670) | 0.0 | 133/133(100%) | 0/133(0%) | Minus/Plus |
Query 2 KYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGG 400 KYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGG Subject 12757 KYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGG 13155
Range 5: 12756 to 13154 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
302.6 bits(654) | 0.0 | 133/133(100%) | 0/133(0%) | Plus/Minus |
Query 3 PPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYF 401 PPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYF Subject 12756 PPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYF 13154
Range 6: 12743 to 13150 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
302.1 bits(653) | 0.0 | 135/136(99%) | 0/136(0%) | Plus/Minus |
Query 7 RECPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYFLNSALRPHTSLPEP 414 R CPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYFLNSALRPHTSLPEP Subject 12743 RVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYFLNSALRPHTSLPEP 13150
Grapevine leafroll associated virus 3 isolate Cl 766, complete genome
Sequence ID: EU344893.1 Length: 17919 Number of Matches: 6
Range 1: 12167 to 12571 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
314.9 bits(681) | 0.0 | 134/135(99%) | 0/135(0%) | Minus/Plus |
Query 7 FR*GSMWT*RRI*KVRSCR*KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTLP 411 FR*GSMWT*RRI*KVRSCR*KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRT P Subject 12167 FR*GSMWT*RRI*KVRSCR*KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTHP 12571
Range 2: 12169 to 12570 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
314.0 bits(679) | 0.0 | 133/134(99%) | 0/134(0%) | Plus/Minus |
Query 8 GSVLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPYL 409 G VLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPYL Subject 12169 GCVLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPYL 12570
Range 3: 12165 to 12572 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
313.1 bits(677) | 0.0 | 135/136(99%) | 0/136(0%) | Minus/Plus |
Query 6 GSGREVCGRNAEFRKYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHSR 413 GSGREVCGRNAEFRKYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGH+R Subject 12165 GSGREVCGRNAEFRKYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTR 12572
Range 4: 12178 to 12576 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
309.9 bits(670) | 0.0 | 133/133(100%) | 0/133(0%) | Minus/Plus |
Query 2 KYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGG 400 KYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGG Subject 12178 KYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGG 12576
Range 5: 12177 to 12575 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
302.6 bits(654) | 0.0 | 133/133(100%) | 0/133(0%) | Plus/Minus |
Query 3 PPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYF 401 PPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYF Subject 12177 PPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYF 12575
Range 6: 12164 to 12571 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
302.1 bits(653) | 0.0 | 135/136(99%) | 0/136(0%) | Plus/Minus |
Query 7 RECPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYFLNSALRPHTSLPEP 414 R CPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYFLNSALRPHTSLPEP Subject 12164 RVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYFLNSALRPHTSLPEP 12571
Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome
Sequence ID: KX756669.1 Length: 18313 Number of Matches: 6
Range 1: 12561 to 12965 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
314.9 bits(681) | 0.0 | 134/135(99%) | 0/135(0%) | Minus/Plus |
Query 7 FR*GSMWT*RRI*KVRSCR*KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTLP 411 FR*GSMWT*RRI*KVRSCR*KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRT P Subject 12561 FR*GSMWT*RRI*KVRSCR*KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTHP 12965
Range 2: 12563 to 12964 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
314.0 bits(679) | 0.0 | 133/134(99%) | 0/134(0%) | Plus/Minus |
Query 8 GSVLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPYL 409 G VLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPYL Subject 12563 GCVLVEKQSYDQLERSDHVIYPSYSYVVGKICWSSPY*QIS*HVF*PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPYL 12964
Range 3: 12559 to 12966 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
311.3 bits(673) | 0.0 | 134/136(99%) | 0/136(0%) | Minus/Plus |
Query 6 GSGREVCGRNAEFRKYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHSR 413 GSGREVCGRNAEFRK+DRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGH+R Subject 12559 GSGREVCGRNAEFRKFDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTR 12966
Range 4: 12572 to 12970 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
308.1 bits(666) | 0.0 | 132/133(99%) | 0/133(0%) | Minus/Plus |
Query 2 KYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGG 400 KYVDVTQNLES+IVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGG Subject 12572 KYVDVTQNLESSIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGG 12970
Range 5: 12571 to 12969 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
299.8 bits(648) | 0.0 | 132/133(99%) | 0/133(0%) | Plus/Minus |
Query 3 PPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYF 401 PPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTI LSKFCVTSTYF Subject 12571 PPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIELSKFCVTSTYF 12969
Range 6: 12558 to 12965 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
298.0 bits(644) | 0.0 | 134/136(99%) | 0/136(0%) | Plus/Minus |
Query 7 RECPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYFLNSALRPHTSLPEP 414 R CPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARS FLNSALRPHTSLPEP Subject 12558 RVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSNFLNSALRPHTSLPEP 12965
Nucleotide Sequence (231 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
193.5 | 1028.7 | 34% | 3.595e-48 | 99% | GQ352632.1 | |
193.5 | 1028.7 | 34% | 3.595e-48 | 99% | KX756668.1 | |
191.7 | 1011.3 | 34% | 1.281e-47 | 97% | KX701860.1 | |
191.2 | 1019.5 | 34% | 1.759e-47 | 97% | EU259806.1 | |
190.8 | 1014.0 | 34% | 2.417e-47 | 97% | KJ174518.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 623, complete genome
Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 6
Range 1: 1638 to 1868 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
193.5 bits(416) | 0.0 | 76/77(99%) | 0/77(0%) | Plus/Plus |
Query 1 RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSIGFLMYLGFRSLKAIRFAGTNILHIPSLNEERTFGWKGGDVYLP 231 RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSIGFLM+LGFRSLKAIRFAGTNILHIPSLNEERTFGWKGGDVYLP Subject 1638 RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSIGFLMHLGFRSLKAIRFAGTNILHIPSLNEERTFGWKGGDVYLP 1868
Range 2: 1639 to 1866 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
183.4 bits(394) | 0.0 | 75/76(99%) | 0/76(0%) | Minus/Minus |
Query 2 GDRRLRPSTQRYALH*VMVCVVCSCPQT*WPLTI*SQGTSRNLSKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP 229 GDRRLRPSTQRYALH*VMVCVVCSCPQT*WPLTI*SQG SRNLSKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP Subject 1639 GDRRLRPSTQRYALH*VMVCVVCSCPQT*WPLTI*SQGASRNLSKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP 1866
Range 3: 1638 to 1868 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
183.0 bits(393) | 0.0 | 77/77(100%) | 0/77(0%) | Minus/Minus |
Query 1 GEIDVSALPPKGTLFIE*WYV*YVRARKPNGL*RSKAKVHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP 231 GEIDVSALPPKGTLFIE*WYV*YVRARKPNGL*RSKAKVHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP Subject 1638 GEIDVSALPPKGTLFIE*WYV*YVRARKPNGL*RSKAKVHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP 1868
Range 4: 1639 to 1866 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
174.3 bits(374) | 0.0 | 76/76(100%) | 0/76(0%) | Plus/Plus |
Query 2 GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CTLALDR*RPLGLRARTYYTYHHSMKSVPLGGRAETSIS 229 GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CTLALDR*RPLGLRARTYYTYHHSMKSVPLGGRAETSIS Subject 1639 GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CTLALDR*RPLGLRARTYYTYHHSMKSVPLGGRAETSIS 1866
Range 5: 1640 to 1867 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
149.5 bits(320) | 0.0 | 75/76(99%) | 0/76(0%) | Minus/Minus |
Query 3 GR*TSPPFHPKVRSSLSDGMCSMFVPANLMAFNDLKPRYIKKPIEKEDEKQRRXXXXXXXXXXLNQHHPLVVLTNA 230 GR*TSPPFHPKVRSSLSDGMCSMFVPANLMAFNDLKPR IKKPIEKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNA Subject 1640 GR*TSPPFHPKVRSSLSDGMCSMFVPANLMAFNDLKPRCIKKPIEKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNA 1867
Range 6: 1640 to 1867 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.9 bits(310) | 0.0 | 75/76(99%) | 0/76(0%) | Plus/Plus |
Query 3 GVREHYQRVVLV*Q*EAEGRNLQTSXXXXXXXXXXXXVPWL*IVKGH*VCGHEHTTHTITQ*RAYLWVEGRRRLSP 230 GVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLFDRFLD PWL*IVKGH*VCGHEHTTHTITQ*RAYLWVEGRRRLSP Subject 1640 GVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLFDRFLDAPWL*IVKGH*VCGHEHTTHTITQ*RAYLWVEGRRRLSP 1867
Grapevine leafroll associated virus 3 isolate TC BR, complete genome
Sequence ID: KX756668.1 Length: 18498 Number of Matches: 6
Range 1: 1638 to 1868 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
193.5 bits(416) | 0.0 | 76/77(99%) | 0/77(0%) | Plus/Plus |
Query 1 RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSIGFLMYLGFRSLKAIRFAGTNILHIPSLNEERTFGWKGGDVYLP 231 RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSIGFLM+LGFRSLKAIRFAGTNILHIPSLNEERTFGWKGGDVYLP Subject 1638 RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSIGFLMHLGFRSLKAIRFAGTNILHIPSLNEERTFGWKGGDVYLP 1868
Range 2: 1639 to 1866 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
183.4 bits(394) | 0.0 | 75/76(99%) | 0/76(0%) | Minus/Minus |
Query 2 GDRRLRPSTQRYALH*VMVCVVCSCPQT*WPLTI*SQGTSRNLSKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP 229 GDRRLRPSTQRYALH*VMVCVVCSCPQT*WPLTI*SQG SRNLSKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP Subject 1639 GDRRLRPSTQRYALH*VMVCVVCSCPQT*WPLTI*SQGASRNLSKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP 1866
Range 3: 1638 to 1868 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
183.0 bits(393) | 0.0 | 77/77(100%) | 0/77(0%) | Minus/Minus |
Query 1 GEIDVSALPPKGTLFIE*WYV*YVRARKPNGL*RSKAKVHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP 231 GEIDVSALPPKGTLFIE*WYV*YVRARKPNGL*RSKAKVHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP Subject 1638 GEIDVSALPPKGTLFIE*WYV*YVRARKPNGL*RSKAKVHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP 1868
Range 4: 1639 to 1866 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
174.3 bits(374) | 0.0 | 76/76(100%) | 0/76(0%) | Plus/Plus |
Query 2 GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CTLALDR*RPLGLRARTYYTYHHSMKSVPLGGRAETSIS 229 GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CTLALDR*RPLGLRARTYYTYHHSMKSVPLGGRAETSIS Subject 1639 GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CTLALDR*RPLGLRARTYYTYHHSMKSVPLGGRAETSIS 1866
Range 5: 1640 to 1867 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
149.5 bits(320) | 0.0 | 75/76(99%) | 0/76(0%) | Minus/Minus |
Query 3 GR*TSPPFHPKVRSSLSDGMCSMFVPANLMAFNDLKPRYIKKPIEKEDEKQRRXXXXXXXXXXLNQHHPLVVLTNA 230 GR*TSPPFHPKVRSSLSDGMCSMFVPANLMAFNDLKPR IKKPIEKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNA Subject 1640 GR*TSPPFHPKVRSSLSDGMCSMFVPANLMAFNDLKPRCIKKPIEKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNA 1867
Range 6: 1640 to 1867 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.9 bits(310) | 0.0 | 75/76(99%) | 0/76(0%) | Plus/Plus |
Query 3 GVREHYQRVVLV*Q*EAEGRNLQTSXXXXXXXXXXXXVPWL*IVKGH*VCGHEHTTHTITQ*RAYLWVEGRRRLSP 230 GVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLFDRFLD PWL*IVKGH*VCGHEHTTHTITQ*RAYLWVEGRRRLSP Subject 1640 GVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLFDRFLDAPWL*IVKGH*VCGHEHTTHTITQ*RAYLWVEGRRRLSP 1867
Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome
Sequence ID: KX701860.1 Length: 18020 Number of Matches: 6
Range 1: 1156 to 1386 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
191.7 bits(412) | 0.0 | 75/77(97%) | 0/77(0%) | Plus/Plus |
Query 1 RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSIGFLMYLGFRSLKAIRFAGTNILHIPSLNEERTFGWKGGDVYLP 231 RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSIGFLM+LGFRSLK IRFAGTNILHIPSLNEERTFGWKGGDVYLP Subject 1156 RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSIGFLMHLGFRSLKVIRFAGTNILHIPSLNEERTFGWKGGDVYLP 1386
Range 2: 1156 to 1386 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
179.8 bits(386) | 0.0 | 76/77(99%) | 0/77(0%) | Minus/Minus |
Query 1 GEIDVSALPPKGTLFIE*WYV*YVRARKPNGL*RSKAKVHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP 231 GEIDVSALPPKGTLFIE*WYV*YVRARKPN L*RSKAKVHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP Subject 1156 GEIDVSALPPKGTLFIE*WYV*YVRARKPNDL*RSKAKVHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP 1386
Range 3: 1157 to 1384 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
176.6 bits(379) | 0.0 | 74/76(97%) | 0/76(0%) | Minus/Minus |
Query 2 GDRRLRPSTQRYALH*VMVCVVCSCPQT*WPLTI*SQGTSRNLSKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP 229 GDRRLRPSTQRYALH*VMVCVVCSCPQT* PLTI*SQG SRNLSKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP Subject 1157 GDRRLRPSTQRYALH*VMVCVVCSCPQT**PLTI*SQGASRNLSKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP 1384
Range 4: 1157 to 1384 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
170.6 bits(366) | 0.0 | 75/76(99%) | 0/76(0%) | Plus/Plus |
Query 2 GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CTLALDR*RPLGLRARTYYTYHHSMKSVPLGGRAETSIS 229 GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CTLALDR*R LGLRARTYYTYHHSMKSVPLGGRAETSIS Subject 1157 GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CTLALDR*RSLGLRARTYYTYHHSMKSVPLGGRAETSIS 1384
Range 5: 1158 to 1385 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
147.7 bits(316) | 0.0 | 74/76(97%) | 0/76(0%) | Minus/Minus |
Query 3 GR*TSPPFHPKVRSSLSDGMCSMFVPANLMAFNDLKPRYIKKPIEKEDEKQRRXXXXXXXXXXLNQHHPLVVLTNA 230 GR*TSPPFHPKVRSSLSDGMCSMFVPANLM FNDLKPR IKKPIEKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNA Subject 1158 GR*TSPPFHPKVRSSLSDGMCSMFVPANLMTFNDLKPRCIKKPIEKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNA 1385
Range 6: 1158 to 1385 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.9 bits(310) | 0.0 | 75/76(99%) | 0/76(0%) | Plus/Plus |
Query 3 GVREHYQRVVLV*Q*EAEGRNLQTSXXXXXXXXXXXXVPWL*IVKGH*VCGHEHTTHTITQ*RAYLWVEGRRRLSP 230 GVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLFDRFLD PWL*IVKGH*VCGHEHTTHTITQ*RAYLWVEGRRRLSP Subject 1158 GVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLFDRFLDAPWL*IVKGH*VCGHEHTTHTITQ*RAYLWVEGRRRLSP 1385
Grapevine leafroll associated virus 3 isolate GP18, complete genome
Sequence ID: EU259806.1 Length: 18498 Number of Matches: 6
Range 1: 1638 to 1868 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
191.2 bits(411) | 0.0 | 75/77(97%) | 0/77(0%) | Plus/Plus |
Query 1 RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSIGFLMYLGFRSLKAIRFAGTNILHIPSLNEERTFGWKGGDVYLP 231 RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSIGFLM+LGFRSLKAIRFAGT+ILHIPSLNEERTFGWKGGDVYLP Subject 1638 RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSIGFLMHLGFRSLKAIRFAGTSILHIPSLNEERTFGWKGGDVYLP 1868
Range 2: 1639 to 1866 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
183.4 bits(394) | 0.0 | 75/76(99%) | 0/76(0%) | Minus/Minus |
Query 2 GDRRLRPSTQRYALH*VMVCVVCSCPQT*WPLTI*SQGTSRNLSKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP 229 GDRRLRPSTQRYALH*VMVCVVCSCPQT*WPLTI*SQG SRNLSKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP Subject 1639 GDRRLRPSTQRYALH*VMVCVVCSCPQT*WPLTI*SQGASRNLSKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP 1866
Range 3: 1638 to 1868 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
181.1 bits(389) | 0.0 | 76/77(99%) | 0/77(0%) | Minus/Minus |
Query 1 GEIDVSALPPKGTLFIE*WYV*YVRARKPNGL*RSKAKVHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP 231 GEIDVSALPPKGTLFIE*WYV*Y RARKPNGL*RSKAKVHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP Subject 1638 GEIDVSALPPKGTLFIE*WYV*YARARKPNGL*RSKAKVHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP 1868
Range 4: 1639 to 1866 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
172.0 bits(369) | 0.0 | 75/76(99%) | 0/76(0%) | Plus/Plus |
Query 2 GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CTLALDR*RPLGLRARTYYTYHHSMKSVPLGGRAETSIS 229 GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CTLALDR*RPLGLRAR YYTYHHSMKSVPLGGRAETSIS Subject 1639 GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CTLALDR*RPLGLRARAYYTYHHSMKSVPLGGRAETSIS 1866
Range 5: 1640 to 1867 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
146.8 bits(314) | 0.0 | 74/76(97%) | 0/76(0%) | Minus/Minus |
Query 3 GR*TSPPFHPKVRSSLSDGMCSMFVPANLMAFNDLKPRYIKKPIEKEDEKQRRXXXXXXXXXXLNQHHPLVVLTNA 230 GR*TSPPFHPKVRSSLSDGMCSM VPANLMAFNDLKPR IKKPIEKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNA Subject 1640 GR*TSPPFHPKVRSSLSDGMCSMLVPANLMAFNDLKPRCIKKPIEKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNA 1867
Range 6: 1640 to 1867 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.9 bits(310) | 0.0 | 75/76(99%) | 0/76(0%) | Plus/Plus |
Query 3 GVREHYQRVVLV*Q*EAEGRNLQTSXXXXXXXXXXXXVPWL*IVKGH*VCGHEHTTHTITQ*RAYLWVEGRRRLSP 230 GVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLFDRFLD PWL*IVKGH*VCGHEHTTHTITQ*RAYLWVEGRRRLSP Subject 1640 GVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLFDRFLDAPWL*IVKGH*VCGHEHTTHTITQ*RAYLWVEGRRRLSP 1867
Grapevine leafroll associated virus 3, complete genome
Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 6
Range 1: 1638 to 1868 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
190.8 bits(410) | 0.0 | 75/77(97%) | 0/77(0%) | Plus/Plus |
Query 1 RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSIGFLMYLGFRSLKAIRFAGTNILHIPSLNEERTFGWKGGDVYLP 231 RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSIGFLM+LGFRSLKAIRFAGTNILHIPSLNEERTFGWK GDVYLP Subject 1638 RAFVSTTKGWCWFNNERLRGEIYRRRCFSSSFSIGFLMHLGFRSLKAIRFAGTNILHIPSLNEERTFGWKSGDVYLP 1868
Range 2: 1638 to 1868 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
183.0 bits(393) | 0.0 | 77/77(100%) | 0/77(0%) | Minus/Minus |
Query 1 GEIDVSALPPKGTLFIE*WYV*YVRARKPNGL*RSKAKVHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP 231 GEIDVSALPPKGTLFIE*WYV*YVRARKPNGL*RSKAKVHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP Subject 1638 GEIDVSALPPKGTLFIE*WYV*YVRARKPNGL*RSKAKVHQETYRKGR*EATTSVNFSPQPLIVKPTPPFGSAHERP 1868
Range 3: 1639 to 1866 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
179.8 bits(386) | 0.0 | 74/76(97%) | 0/76(0%) | Minus/Minus |
Query 2 GDRRLRPSTQRYALH*VMVCVVCSCPQT*WPLTI*SQGTSRNLSKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP 229 GDRRLR STQRYALH*VMVCVVCSCPQT*WPLTI*SQG SRNLSKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP Subject 1639 GDRRLRSSTQRYALH*VMVCVVCSCPQT*WPLTI*SQGASRNLSKRKMRSNDVCKFLPSASHC*TNTTLW*CSRTP 1866
Range 4: 1639 to 1866 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
174.3 bits(374) | 0.0 | 76/76(100%) | 0/76(0%) | Plus/Plus |
Query 2 GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CTLALDR*RPLGLRARTYYTYHHSMKSVPLGGRAETSIS 229 GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CTLALDR*RPLGLRARTYYTYHHSMKSVPLGGRAETSIS Subject 1639 GRS*ALPKGGVGLTMRG*GEKFTDVVASHLPFR*VS*CTLALDR*RPLGLRARTYYTYHHSMKSVPLGGRAETSIS 1866
Range 5: 1640 to 1867 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.9 bits(310) | 0.0 | 74/76(97%) | 0/76(0%) | Minus/Minus |
Query 3 GR*TSPPFHPKVRSSLSDGMCSMFVPANLMAFNDLKPRYIKKPIEKEDEKQRRXXXXXXXXXXLNQHHPLVVLTNA 230 GR*TSP FHPKVRSSLSDGMCSMFVPANLMAFNDLKPR IKKPIEKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNA Subject 1640 GR*TSPLFHPKVRSSLSDGMCSMFVPANLMAFNDLKPRCIKKPIEKEDEKQRRL*ISPLSLSLLNQHHPLVVLTNA 1867
Range 6: 1640 to 1867 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
141.3 bits(302) | 0.0 | 74/76(97%) | 0/76(0%) | Plus/Plus |
Query 3 GVREHYQRVVLV*Q*EAEGRNLQTSXXXXXXXXXXXXVPWL*IVKGH*VCGHEHTTHTITQ*RAYLWVEGRRRLSP 230 GVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLFDRFLD PWL*IVKGH*VCGHEHTTHTITQ*RAYLWVE RRRLSP Subject 1640 GVREHYQRVVLV*Q*EAEGRNLQTSLLLIFLFDRFLDAPWL*IVKGH*VCGHEHTTHTITQ*RAYLWVEERRRLSP 1867
Nucleotide Sequence (627 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
430.5 | 1121.8 | 29% | 1.002e-118 | 35% | JQ423939.1 | |
429.6 | 1141.9 | 29% | 1.884e-118 | 35% | GQ352633.1 | |
422.3 | 1110.0 | 40% | 2.956e-116 | 37% | KJ174518.1 | |
421.4 | 1135.2 | 33% | 5.562e-116 | 38% | GQ352632.1 | |
477.6 | 2604.0 | 26% | 6.56e-133 | 97% | KM058745.1 |
Alignments
Grapevine leafroll associated virus 3 isolate LN, complete genome
Sequence ID: JQ423939.1 Length: 18563 Number of Matches: 9
Range 1: 11621 to 12247 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
430.5 bits(938) | 0.0 | 177/209(85%) | 0/209(0%) | Plus/Plus |
Query 1 SIECVWRWSTGLENFYPDPVVAVMTGGSSALSKVREDVANLPQVSKVIFDSSDFRCSVACGAKVYCDILSGSSNLRLVDTLTNTLTDEVSDFQPVVIFPKGSPIPCSYTHRYNVSGDEVVYGIFEGENNRAFLNEPTFRGMSKRRGEPKEMDIAVFKLSTDGTVSVIVNGEEVVNEYLVPGTTNILESLVYRSGREEVEAKAIPEYLKT 627 S V + TGL+NFYPDPV+AVMTGGSSAL KVR DVANLPQ+SKV+FDS+DFRCSVACGAKVYCDIL+G+S LRLVDTLTNTLTDEV+DFQPVVIFPKGSPIPCSYTHRY VSGDEVVYGIFEGENNRAFLNEPTFRG+SKRRGEPKE D+A F LSTDGTVSVIVNGEEV N+YLVPGTTN+L+SLVY+SGRE++EAKAIPEYL T Subject 11621 SARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSADFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVTDFQPVVIFPKGSPIPCSYTHRYTVSGDEVVYGIFEGENNRAFLNEPTFRGVSKRRGEPKESDVAQFNLSTDGTVSVIVNGEEVKNQYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTT 12247
Range 2: 12001 to 12246 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
137.2 bits(293) | 0.0 | 61/82(74%) | 0/82(0%) | Minus/Minus |
Query 381 VFRYSGIAFASTSSLPDL*TKDSNMLVVPGTRYSFTTSSPLTITLTVPSVDNLNTAISISFGSPLRLDIPRNVGSFRKALLF 626 V +YSGIA AS SSLPDL T +S+ VVPGTRY F TSSPLT+T TVPSV+ LN A S+SFGSPLR D PRNVGSFRKALLF Subject 12001 VVKYSGIALASKSSLPDLYTNESSTFVVPGTRY*FFTSSPLTMTDTVPSVERLNCATSLSFGSPLRFDTPRNVGSFRKALLF 12246
Range 3: 11632 to 11832 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.9 bits(216) | 0.0 | 45/67(67%) | 0/67(0%) | Minus/Minus |
Query 12 PESMSQYTFAPQATEHRKSELSNITFDTCGKFATSSLTFDSALEPPVMTATTGSG*KFSKPVLHRQT 212 P MSQ T APQATEH KS LSN T D CGK ATS LT AL+PPV+TA TGSG*K S+PVL+ T Subject 11632 PAKMSQ*TLAPQATEHLKSALSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTST 11832
Range 4: 11890 to 11946 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
41.4 bits(84) | 0.0 | 17/19(89%) | 0/19(0%) | Minus/Minus |
Query 270 VYEHGIGLPLGKITTG*KS 326 VYE GIGLP GKITTG*KS Subject 11890 VYEQGIGLPFGKITTG*KS 11946
Range 5: 11651 to 12247 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
168.8 bits(362) | 0.0 | 84/199(42%) | 0/199(0%) | Minus/Minus |
Query 31 CL*VLRYCFRFYFFPTRSVD*RF*YVSRPWH*ILVHDFLSVDDHTYRPICR*LKHCDIHLLRLTSTFGHTPERRFIQKGSVVLAFKDAVDDFIPTHVVPVSVRTRYRTTFGKNHHRLKIRHFIS*SVS*CVH*AQIATTGKYVAIYLRPTGH*TPKIRTIEYNL*HLWQIRYVLSYFR*RARTPRHDGHHRIWIKIFQT 627 C VLRYC F + R *+V P + IL+ L+++D YR + +K I + TF + PE RFI K S++L FK + FI H VP+SV Y T F +NHHRLKIRHF+ * V * VH +Q T + VA+ L TGH*T KI TI++N +L QI ++ S * P H+G++R+WIK+ +T Subject 11651 CGQVLRYCLSLQIFSPGFIHQRI*HVCCPGYQILILYLLTINDDRYRTVRGKIKLRHIAFFWFSPTFRYAPECRFI*KSSIILPFKYTIYHFITAHRVPMSV*AGYWTAFRENHHRLKIRHFVR*RVR*SVHQSQSTITRQNVAVNLSSTGH*TSKIGTIKHNFRYLRQISHITSDLN*ST*PPSHNGNNRVWIKVIET 12247
Range 6: 11740 to 12054 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
84.9 bits(179) | 0.0 | 48/105(46%) | 0/105(0%) | Plus/Plus |
Query 120 FATSVKGYIR*FGFSVFSGLWGEGILRHTFR**QSAPSGHTN*HSN**SV*FSAGGDFSQR*SDTVFVHSQVQREWG*SRLRHL*RREQQSLSE*TDVPGYVQT* 434 FA + + * F +FSGLW G+LRH ** + GH N H+N S FS GGDF +R S+T+ +HS V E *S + ++*R E S S+*TD+PG ++T* Subject 11740 FAADI*SCV**CRF*MFSGLWS*GLLRHFGG**WTETGGHFNEHANGRSDGFSTGGDFPERQSNTLLIHS*VHGER**SGIWYI*RGE**SFSK*TDIPGRIET* 12054
Range 7: 12109 to 12237 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
23.5 bits(45) | 0.0 | 15/43(35%) | 0/43(0%) | Plus/Plus |
Query 489 GKCDRQRRGSRERVSSARDD*HIRIFSLQIW*GRSRSESNTGV 617 G C R G +E +S RD+ R + I R NTGV Subject 12109 GICHR*W*GGKESISGTRDNKRARFVGV*IRERRFGG*GNTGV 12237
Range 8: 11766 to 12053 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
81.3 bits(171) | 0.0 | 46/96(48%) | 0/96(0%) | Minus/Minus |
Query 146 YVWTYPGTSVHSEXXXXXXXXXXXXXLHPHSRCTCECTNTVSDYLWEKSPPAENQTLHQLEC*LVCPLGADCYYRKVCRNIPSPHRPLNTENPNYR 433 YV PG SVH E+L S LQ LH S CT EC + V D L KSPP EN +L L C L CP + YY CR+ P HRPLN N +Y+ Subject 11766 YVSIRPGMSVHLEKLYYSPLQIYHIPLHHRSPCTYECMSRVLDCLSGKSPPVENPSLRPLACSLKCPPVSVHYYPPKCRSKP*LHRPLNI*NRHYQ 12053
Range 9: 11739 to 11921 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.4 bits(108) | 0.0 | 28/61(46%) | 0/61(0%) | Plus/Plus |
Query 119 ICHKCQRLYSIVRIFGVQWPVGRRYIATYFPVVAICA*WTH*LTL*LMKCLIFSRW*FFPK 301 IC + +L IV I VQWPV R+ AT++ V+ WT * T * K IF+RW*F K Subject 11739 ICRRYLKLCLIVPILDVQWPVELRFTATFWRVIVD*DWWTL*RTR*RTK*RIFNRW*FSRK 11921
Grapevine leafroll associated virus 3 isolate PL 20, complete genome
Sequence ID: GQ352633.1 Length: 18433 Number of Matches: 9
Range 1: 11491 to 12117 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
429.6 bits(936) | 0.0 | 177/209(85%) | 0/209(0%) | Plus/Plus |
Query 1 SIECVWRWSTGLENFYPDPVVAVMTGGSSALSKVREDVANLPQVSKVIFDSSDFRCSVACGAKVYCDILSGSSNLRLVDTLTNTLTDEVSDFQPVVIFPKGSPIPCSYTHRYNVSGDEVVYGIFEGENNRAFLNEPTFRGMSKRRGEPKEMDIAVFKLSTDGTVSVIVNGEEVVNEYLVPGTTNILESLVYRSGREEVEAKAIPEYLKT 627 S V + TGL+NFYPDPV+AVMTGGSSAL KVR DVANLPQ+SKV+FDS+DFRCSVACGAKVYCDIL+G+S LRLVDTLTNTLTDEV DFQPVVIFPKGSPIPCSYTHRY VSGDEVVYGIFEGENNRAFLNEPTFRG+SKRRGEPKE D+A F LSTDGTVSVIVNGEEV N+YLVPGTTN+L+SLVY+SGRE++EAKAIPEYL T Subject 11491 SARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSADFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVMDFQPVVIFPKGSPIPCSYTHRYTVSGDEVVYGIFEGENNRAFLNEPTFRGVSKRRGEPKESDVAQFNLSTDGTVSVIVNGEEVKNQYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTT 12117
Range 2: 11871 to 12116 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
137.2 bits(293) | 0.0 | 61/82(74%) | 0/82(0%) | Minus/Minus |
Query 381 VFRYSGIAFASTSSLPDL*TKDSNMLVVPGTRYSFTTSSPLTITLTVPSVDNLNTAISISFGSPLRLDIPRNVGSFRKALLF 626 V +YSGIA AS SSLPDL T +S+ VVPGTRY F TSSPLT+T TVPSV+ LN A S+SFGSPLR D PRNVGSFRKALLF Subject 11871 VVKYSGIALASKSSLPDLYTNESSTFVVPGTRY*FFTSSPLTMTDTVPSVERLNCATSLSFGSPLRFDTPRNVGSFRKALLF 12116
Range 3: 11502 to 11702 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.9 bits(216) | 0.0 | 45/67(67%) | 0/67(0%) | Minus/Minus |
Query 12 PESMSQYTFAPQATEHRKSELSNITFDTCGKFATSSLTFDSALEPPVMTATTGSG*KFSKPVLHRQT 212 P MSQ T APQATEH KS LSN T D CGK ATS LT AL+PPV+TA TGSG*K S+PVL+ T Subject 11502 PAKMSQ*TLAPQATEHLKSALSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTST 11702
Range 4: 11760 to 11816 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
41.4 bits(84) | 0.0 | 17/19(89%) | 0/19(0%) | Minus/Minus |
Query 270 VYEHGIGLPLGKITTG*KS 326 VYE GIGLP GKITTG*KS Subject 11760 VYEQGIGLPFGKITTG*KS 11816
Range 5: 11521 to 12117 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
172.0 bits(369) | 0.0 | 85/199(43%) | 0/199(0%) | Minus/Minus |
Query 31 CL*VLRYCFRFYFFPTRSVD*RF*YVSRPWH*ILVHDFLSVDDHTYRPICR*LKHCDIHLLRLTSTFGHTPERRFIQKGSVVLAFKDAVDDFIPTHVVPVSVRTRYRTTFGKNHHRLKIRHFIS*SVS*CVH*AQIATTGKYVAIYLRPTGH*TPKIRTIEYNL*HLWQIRYVLSYFR*RARTPRHDGHHRIWIKIFQT 627 C VLRYC F + R *+V P + IL+ L+++D YR + +K I + TF + PE RFI K S++L FK + FI H VP+SV Y T F +NHHRLKI HF+ * V * VH +Q T + VA+ L TGH*TPKI TIE+N +L QI ++ S * P H+G++R+WIK+ +T Subject 11521 CGQVLRYCLSLQIFSPGFIHQRI*HVCCPGYQILILYLLTINDDRYRTVRGKIKLRHIAFFWFSPTFRYAPECRFI*KSSIILPFKYTIYHFITAHRVPMSV*AGYWTAFRENHHRLKIHHFVR*RVR*SVHQSQSTITRQNVAVNLSSTGH*TPKIGTIEHNFRYLRQISHITSDLN*ST*PPSHNGNNRVWIKVIET 12117
Range 6: 11610 to 11924 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.9 bits(192) | 0.0 | 50/105(48%) | 0/105(0%) | Plus/Plus |
Query 120 FATSVKGYIR*FGFSVFSGLWGEGILRHTFR**QSAPSGHTN*HSN**SV*FSAGGDFSQR*SDTVFVHSQVQREWG*SRLRHL*RREQQSLSE*TDVPGYVQT* 434 FA ++ +R* F VFSGLW G+LRH ** + GH N H+N S FS GGDF +R S+T+ +HS V E *S + ++*R E S S+*TD+PG ++T* Subject 11610 FAANI*SCVR*CRF*VFSGLWS*GLLRHFGG**WTETGGHFNEHANGRSDGFSTGGDFPERQSNTLLIHS*VHGER**SGIWYI*RGE**SFSK*TDIPGRIET* 11924
Range 7: 11979 to 12107 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
23.5 bits(45) | 0.0 | 15/43(35%) | 0/43(0%) | Plus/Plus |
Query 489 GKCDRQRRGSRERVSSARDD*HIRIFSLQIW*GRSRSESNTGV 617 G C R G +E +S RD+ R + I R NTGV Subject 11979 GICHR*W*GGKESISGTRDNKRARFVGV*IRERRFGG*GNTGV 12107
Range 8: 11636 to 11923 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
85.8 bits(181) | 0.0 | 48/96(50%) | 0/96(0%) | Minus/Minus |
Query 146 YVWTYPGTSVHSEXXXXXXXXXXXXXLHPHSRCTCECTNTVSDYLWEKSPPAENQTLHQLEC*LVCPLGADCYYRKVCRNIPSPHRPLNTENPNYR 433 YV PG SVH E+L S LQ LH S CT EC + V D L KSPP EN +L L C L CP + YY CR+ P HRPLNT N +YR Subject 11636 YVSIRPGMSVHLEKLYYSPLQIYHIPLHHRSPCTYECMSRVLDCLSGKSPPVENPSLRPLACSLKCPPVSVHYYPPKCRSKP*LHRPLNT*NRHYR 11923
Range 9: 11609 to 11791 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
59.7 bits(124) | 0.0 | 31/61(51%) | 0/61(0%) | Plus/Plus |
Query 119 ICHKCQRLYSIVRIFGVQWPVGRRYIATYFPVVAICA*WTH*LTL*LMKCLIFSRW*FFPK 301 IC K +L SIV I GVQWPV R+ AT++ V+ WT * T * K IF+RW*F K Subject 11609 ICRKYLKLCSIVPILGVQWPVELRFTATFWRVIVD*DWWTL*RTR*RTK*WIFNRW*FSRK 11791
Grapevine leafroll associated virus 3, complete genome
Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 10
Range 1: 11556 to 12182 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
422.3 bits(920) | 0.0 | 174/209(83%) | 0/209(0%) | Plus/Plus |
Query 1 SIECVWRWSTGLENFYPDPVVAVMTGGSSALSKVREDVANLPQVSKVIFDSSDFRCSVACGAKVYCDILSGSSNLRLVDTLTNTLTDEVSDFQPVVIFPKGSPIPCSYTHRYNVSGDEVVYGIFEGENNRAFLNEPTFRGMSKRRGEPKEMDIAVFKLSTDGTVSVIVNGEEVVNEYLVPGTTNILESLVYRSGREEVEAKAIPEYLKT 627 S V + TGL+NFYPDPV+AVMTGGSSAL KVR DVA LPQ+SKV+FDS+DFRCSVACGAKVYCDIL+G+S LRLVDTLTNTLTDEV DFQPVVIFPKGSPIPCSYTHRY VSGDEVVYGIFEGENNRAFLNEPTFRG+SKRRG+PKE D+A LSTDGTVSVIVNGEEV N+YLVPGTTN+L+SLVY+SGRE++EAKAIPEYL T Subject 11556 SARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVAKLPQISKVVFDSTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVSGDEVVYGIFEGENNRAFLNEPTFRGVSKRRGDPKETDVAQINLSTDGTVSVIVNGEEVKNQYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTT 12182
Range 2: 11936 to 12181 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
133.5 bits(285) | 0.0 | 60/82(73%) | 0/82(0%) | Minus/Minus |
Query 381 VFRYSGIAFASTSSLPDL*TKDSNMLVVPGTRYSFTTSSPLTITLTVPSVDNLNTAISISFGSPLRLDIPRNVGSFRKALLF 626 V +YSGIA AS SSLPDL T +S+ VVPGTRY F TSSPLT+T TVPSV+ L A S+SFGSPLR D PRNVGSFRKALLF Subject 11936 VVKYSGIALASKSSLPDLYTNESSTFVVPGTRY*FFTSSPLTMTDTVPSVERLICATSVSFGSPLRFDTPRNVGSFRKALLF 12181
Range 3: 11567 to 11767 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
97.3 bits(206) | 0.0 | 43/67(64%) | 0/67(0%) | Minus/Minus |
Query 12 PESMSQYTFAPQATEHRKSELSNITFDTCGKFATSSLTFDSALEPPVMTATTGSG*KFSKPVLHRQT 212 P +SQ T APQATEH KS LSN T D CG ATS LT AL+PPV+TA TGSG*K S+PVL+ T Subject 11567 PAKISQ*TLAPQATEHLKSVLSNTTLDICGSLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTST 11767
Range 4: 11825 to 11881 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
41.4 bits(84) | 0.0 | 17/19(89%) | 0/19(0%) | Minus/Minus |
Query 270 VYEHGIGLPLGKITTG*KS 326 VYE GIGLP GKITTG*KS Subject 11825 VYEQGIGLPFGKITTG*KS 11881
Range 5: 11586 to 12182 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
166.9 bits(358) | 0.0 | 81/199(41%) | 0/199(0%) | Minus/Minus |
Query 31 CL*VLRYCFRFYFFPTRSVD*RF*YVSRPWH*ILVHDFLSVDDHTYRPICR*LKHCDIHLLRLTSTFGHTPERRFIQKGSVVLAFKDAVDDFIPTHVVPVSVRTRYRTTFGKNHHRLKIRHFIS*SVS*CVH*AQIATTGKYVAIYLRPTGH*TPKIRTIEYNL*HLWQIRYVLSYFR*RARTPRHDGHHRIWIKIFQT 627 C VLRYC F R + *R *YV P + IL+ L+VDD Y IC + + ++ TF + E FI K S++L FK A+ FI TH VP+SV YRT F +NH+RLKI + + * + *CVH Q A T + +A+ T H*T KI T+E++ +L Q ++ S * P H+G +R+WIK+ +T Subject 11586 CSQVLRYCLSLQIFSPRFIH*RI*YVCCPRYQILILYLLTVDDDGYCTICGKINLRHVSFFWVSPTFRYASECWFI*KSSIILPFKYAIHHFITTHCVPMSV*AGYRTAFRENHYRLKIHYLVR*RIR*CVHQPQSAITRQNIAVNFSSTSH*TSKIGTVEHDFRYLRQFGHITSDLN*ST*PPSHNGDNRVWIKVIKT 12182
Range 6: 11678 to 11989 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.9 bits(168) | 0.0 | 43/104(41%) | 0/104(0%) | Plus/Plus |
Query 123 ATSVKGYIR*FGFSVFSGLWGEGILRHTFR**QSAPSGHTN*HSN**SV*FSAGGDFSQR*SDTVFVHSQVQREWG*SRLRHL*RREQQSLSE*TDVPGYVQT* 434 A + +R + F +FSGLW +LR+ **+ GH N ++N FS G DF +R SDT+ +HS V EW *S + H+*R E S S+*T++P ++T* Subject 11678 AADI*SRVRQYRF*MFSGLWS*SLLRYFGG**RIEAGGHINEYANGRGSGFSTGSDFPERQSDTLLIHS*VHSEW**SGVWHI*RGE**SFSK*TNIPRRIET* 11989
Range 7: 12032 to 12172 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
34.5 bits(69) | 0.0 | 18/47(38%) | 0/47(0%) | Plus/Plus |
Query 477 YRWDGKCDRQRRGSRERVSSARDD*HIRIFSLQIW*GRSRSESNTGV 617 +RW RQR G +E +S D+ R S+ IW R NTGV Subject 12032 HRWYSIRHRQR*GGKESISGTWDNKRTRFVSV*IWERRFGG*GNTGV 12172
Range 8: 11905 to 12177 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
42.8 bits(87) | 0.0 | 35/91(38%) | 0/91(0%) | Plus/Plus |
Query 350 MKSSTASLKARTTEPF*MNRRSGVCPNVEVSRRRWISQCLSYLQMGR*V*SSTERKS*TSI*CQGRLTY*NL*STDLVGKK*KRKQYRST* 622 MK A LK R E F*MN+ S NV ++++ + L + QM + SST R+ +I G+ TY* * +L K + +QYRST* Subject 11905 MKWCMAYLKGRIIELF*MNQHSEAYRNVGETQKKLTWRRLIFPQMVQYPSSSTVRR*RINIWYLGQQTY*IR*CINLGEKIWRLRQYRST* 12177
Range 9: 11677 to 11856 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
36.3 bits(73) | 0.0 | 22/60(37%) | 0/60(0%) | Plus/Plus |
Query 122 CHKCQRLYSIVRIFGVQWPVGRRYIATYFPVVAICA*WTH*LTL*LMKCLIFSRW*FFPK 301 C + + S V I VQW V ++ A ++ V+A WTH* * + IF+R *F K Subject 11677 CRRYLKSCSTVPILDVQWLVELKFTAIFWRVIAD*GWWTH*RIR*RTR*WIFNR**FSRK 11856
Range 10: 11713 to 11988 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
55.1 bits(114) | 0.0 | 40/92(43%) | 0/92(0%) | Minus/Minus |
Query 158 YVWTYPGTSVHSEXXXXXXXXXXXXXLHPHSRCTCECTNTVSDYLWEKSPPAENQTLHQLEC*LVCPLGADCYYRKVCRNIPSPHRPLNTEN 433 YV G VH E+L S LQ C LH HS CT EC + VSD L KS P EN L L+CP + YY R+ H+PLN N Subject 11713 YVSIRLGMLVHLEKLYYSPLQICHTPLHHHSLCTYECMSRVSDCLSGKSLPVENPLPRPLAYSLMCPPASIRYYPPKYRSKL*LHKPLNI*N 11988
Grapevine leafroll associated virus 3 isolate 623, complete genome
Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 10
Range 1: 11556 to 12182 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
421.4 bits(918) | 0.0 | 173/209(83%) | 0/209(0%) | Plus/Plus |
Query 1 SIECVWRWSTGLENFYPDPVVAVMTGGSSALSKVREDVANLPQVSKVIFDSSDFRCSVACGAKVYCDILSGSSNLRLVDTLTNTLTDEVSDFQPVVIFPKGSPIPCSYTHRYNVSGDEVVYGIFEGENNRAFLNEPTFRGMSKRRGEPKEMDIAVFKLSTDGTVSVIVNGEEVVNEYLVPGTTNILESLVYRSGREEVEAKAIPEYLKT 627 S V + TGL+NFYPDPV+AVMTGGSSAL KVR DVANLPQ+SKV+FD++DFRCSVACGAKVYCDIL+G+S LRLVDTLTNTLTDEV DFQPVVIFPKGSPIPCSYTHRY V G +VVYGIFEGENNRAFLNEPTFRG+SKRRG+PKE D+A F LSTDGTVSVIVNGEEV NEYLVPGTTN+L+SLVY+SGRE++EAKAIPEYL T Subject 11556 SARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDNTDFRCSVACGAKVYCDILAGNSGLRLVDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPKETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTT 12182
Range 2: 11936 to 12181 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
146.8 bits(314) | 0.0 | 65/82(79%) | 0/82(0%) | Minus/Minus |
Query 381 VFRYSGIAFASTSSLPDL*TKDSNMLVVPGTRYSFTTSSPLTITLTVPSVDNLNTAISISFGSPLRLDIPRNVGSFRKALLF 626 V +YSGIA AS SSLPDL*T +S+ VVPGTRYSF TSSPLTIT TVPSVD LN A S+SFGSPLR D PRNVGSFRKALLF Subject 11936 VVKYSGIALASKSSLPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVDKLNCATSVSFGSPLRFDTPRNVGSFRKALLF 12181
Range 3: 11567 to 11767 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
99.6 bits(211) | 0.0 | 44/67(66%) | 0/67(0%) | Minus/Minus |
Query 12 PESMSQYTFAPQATEHRKSELSNITFDTCGKFATSSLTFDSALEPPVMTATTGSG*KFSKPVLHRQT 212 P +SQ T APQATEH KS LSN T D CGK ATS LT AL+PPV+TA TGSG*K S+PVL+ T Subject 11567 PAKISQ*TLAPQATEHLKSVLSNTTLDICGKLATSLLTLTRALDPPVITAITGSG*KLSRPVLNTST 11767
Range 4: 11825 to 11881 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
41.4 bits(84) | 0.0 | 17/19(89%) | 0/19(0%) | Minus/Minus |
Query 270 VYEHGIGLPLGKITTG*KS 326 VYE GIGLP GKITTG*KS Subject 11825 VYEQGIGLPFGKITTG*KS 11881
Range 5: 11586 to 12182 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
163.3 bits(350) | 0.0 | 80/199(40%) | 0/199(0%) | Minus/Minus |
Query 31 CL*VLRYCFRFYFFPTRSVD*RF*YVSRPWH*ILVHDFLSVDDHTYRPICR*LKHCDIHLLRLTSTFGHTPERRFIQKGSVVLAFKDAVDDFIPTHVVPVSVRTRYRTTFGKNHHRLKIRHFIS*SVS*CVH*AQIATTGKYVAIYLRPTGH*TPKIRTIEYNL*HLWQIRYVLSYFR*RARTPRHDGHHRIWIKIFQT 627 C VL YC F +D R *YV P + I + FL+V+++ YR +C *+K + L ++ TF + PERRFI K V+L FK V TH V VSV T Y TTF +N++RLK+ H + * + VH +Q A T + + + L PTG+ TPKI +E+NL +L QI ++ * P H+ ++R+WIK+ +T Subject 11586 CGQVLWYCLSL*IFSPGFIDQRI*YVCCPGYQIFILYFLTVNNNRYRTVCG*IKLRYVGLFWVSPTFRYAPERRFI*KSPVILPFKYTVHHISTTHCVSVSV*TGYWTTFRENYYRLKVHHLVR*RIRQSVHQSQSAITCQNITVNLSPTGYRTPKISIVEHNLRYLRQIGHITPDLN*ST*PPSHNSNNRVWIKVVKT 12182
Range 6: 11672 to 12172 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
111.0 bits(236) | 0.0 | 65/167(39%) | 0/167(0%) | Plus/Plus |
Query 117 EFATSVKGYIR*FGFSVFSGLWGEGILRHTFR**QSAPSGHTN*HSN**SV*FSAGGDFSQR*SDTVFVHSQVQREWG*SRLRHL*RREQQSLSE*TDVPGYVQT*R*AEGDGYRSV*VIYRWDGKCDRQRRGSRERVSSARDD*HIRIFSLQIW*GRSRSESNTGV 617 +FA + G +R + F VF LWG G+L + R**++ GH + ++N S G +F +R*S+T+F+HSQ+ W +R++*R E Q S+*TDVPG ++T* + D ++* I+R G C R GS+E +S RD+ R L I R R NT V Subject 11672 QFAADI*GCVRQY*F*VFGSLWG*GLL*YFGR**RTETGGHFDEYANGRGGGLSTGSNFPER*SNTLFIHSQIHSGWWRCGVRYI*RGE*QGFSK*TDVPGRIET*GRPKRDRRSAI*FIHRRYGICYC*R*GSKE*ISGTRDNKRTRFVGL*IRERRFRG*GNTRV 12172
Range 7: 11917 to 12177 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
44.1 bits(90) | 0.0 | 36/87(41%) | 0/87(0%) | Plus/Plus |
Query 362 TASLKARTTEPF*MNRRSGVCPNVEVSRRRWISQCLSYLQMGR*V*SSTERKS*TSI*CQGRLTY*NL*STDLVGKK*KRKQYRST* 622 T LK R T F*MNRRSG NV +++R + L Y Q R + T RK +I G+ TY* S + K *+ +QY+ST* Subject 11917 TVYLKGRITGLF*MNRRSGAYRNVGETQKRPT*RNLIYPQTVRYLLLLTVRK*RMNIWYPGQQTY*IRWSINPGEKI*RLRQYQST* 12177
Range 8: 11674 to 11856 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
37.3 bits(75) | 0.0 | 23/61(38%) | 0/61(0%) | Plus/Plus |
Query 119 ICHKCQRLYSIVRIFGVQWPVGRRYIATYFPVVAICA*WTH*LTL*LMKCLIFSRW*FFPK 301 IC + RL S + I GV+ PVG R+ ++ V+A WT * * + F+R *F K Subject 11674 ICRRYLRLCSTILILGVR*PVGLRFTVIFWQVIAD*DWWTL*RIR*RTRWWTFNR**FSRK 11856
Range 9: 11674 to 11901 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.3 bits(99) | 0.0 | 29/76(38%) | 0/76(0%) | Minus/Minus |
Query 119 HSRCTCECTNTVSDYLWEKSPPAENQTLHQLEC*LVCPLGADCYYRKVCRNIPSPHRPLNTENPNYRI*PLTLVAN 346 H C CEC N V DYL K P E+ L CP + YY + P PHR NT N R P AN Subject 11674 HPLCICECMNRVLDYLSGKLLPVESPPPRPLAYSSKCPPVSVRYYLPKYHSKP*PHRLPNT*NQYCRTQP*ISAAN 11901
Grapevine leafroll associated virus 3 isolate GH24, complete genome
Sequence ID: KM058745.1 Length: 18493 Number of Matches: 10
Range 1: 11580 to 12182 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
477.6 bits(1036) | 0.0 | 199/201(99%) | 0/201(0%) | Minus/Minus |
Query 25 CL*VLRYCFRFYFFPTRSVD*RF*YVSRPWH*ILVHDFLSVDDHTYRPICR*LKHCDIHLLRLTSTFGHTPERRFIQKGSVVLAFKDAVDDFIPTHVVPVSVRTRYRTTFGKNHHRLKIRHFIS*SVS*CVH*AQIATTGKYVAIYLRPTGH*TPKIRTIEYNL*HLWQIRYVLSYFR*RARTPRHDGHHRIWIKIFQTRA 627 CL*VLRYCFRF FFPTRSVD*RF*YVSRPWH*ILVHDFLSVDDHTYRPICR*LKHCDIHLLRLTSTFGHTPERRFIQKGSVVLAFKDAVDDFIPTHVVPVSVRTRYRTTFGKNHHRLKIRHFIS*SVS*CVH*AQIATTGKYVAIYLRPTGH*TPKIRTIEYNL*HLWQIRYVLSYFR*RARTPRHDGHHRIWIKIFQT A Subject 11580 CL*VLRYCFRF*FFPTRSVD*RF*YVSRPWH*ILVHDFLSVDDHTYRPICR*LKHCDIHLLRLTSTFGHTPERRFIQKGSVVLAFKDAVDDFIPTHVVPVSVRTRYRTTFGKNHHRLKIRHFIS*SVS*CVH*AQIATTGKYVAIYLRPTGH*TPKIRTIEYNL*HLWQIRYVLSYFR*RARTPRHDGHHRIWIKIFQTGA 12182
Range 2: 11577 to 12182 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
472.0 bits(1029) | 0.0 | 200/202(99%) | 0/202(0%) | Plus/Plus |
Query 22 WSTGLENFYPDPVVAVMTGGSSALSKVREDVANLPQVSKVIFDSSDFRCSVACGAKVYCDILSGSSNLRLVDTLTNTLTDEVSDFQPVVIFPKGSPIPCSYTHRYNVSGDEVVYGIFEGENNRAFLNEPTFRGMSKRRGEPKEMDIAVFKLSTDGTVSVIVNGEEVVNEYLVPGTTNILESLVYRSGREEVEAKAIPEYLKT 627 +STGLENFYPDPVVAVMTGGSSALSKVREDVANLPQVSKVIFDSSDFRCSVACGAKVYCDILSGSSNLRLVDTLTNTLTDEVSDFQPVVIFPKGSPIPCSYTHRYNVSGDEVVYGIFEGENNRAFLNEPTFRGMSKRRGEPKEMDIAVFKLSTDGTVSVIVNGEEVVNEYLVPGTTNILESLVYRSGREE+EAKAIPEYLKT Subject 11577 FSTGLENFYPDPVVAVMTGGSSALSKVREDVANLPQVSKVIFDSSDFRCSVACGAKVYCDILSGSSNLRLVDTLTNTLTDEVSDFQPVVIFPKGSPIPCSYTHRYNVSGDEVVYGIFEGENNRAFLNEPTFRGMSKRRGEPKEMDIAVFKLSTDGTVSVIVNGEEVVNEYLVPGTTNILESLVYRSGREELEAKAIPEYLKT 12182
Range 3: 11573 to 12181 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
451.5 bits(979) | 0.0 | 199/203(98%) | 0/203(0%) | Plus/Plus |
Query 18 AVEHGFGKFLSRSCGGRHDGGF*RAIESKRGRSEFATSVKGYIR*FGFSVFSGLWGEGILRHTFR**QSAPSGHTN*HSN**SV*FSAGGDFSQR*SDTVFVHSQVQREWG*SRLRHL*RREQQSLSE*TDVPGYVQT*R*AEGDGYRSV*VIYRWDGKCDRQRRGSRERVSSARDD*HIRIFSLQIW*GRSRSESNTGVPKD 626 +V H FGKFLSRSCGGRHDGGF*RAIESKRGRSEFATSVKGYIR*FGFSVFSGLWGEGILRHTFR**QSAPSGHTN*HSN**SV*FSAGGDFSQR*SDTVFVHSQVQREWG*SRLRHL*RREQQSLSE*TDVPGYVQT*R*AEGDGYRSV*VIYRWDGKCDRQRRGSRERVSSARDD*HIRIFSLQIW*GR RSESNTGVPKD Subject 11573 SV*HRFGKFLSRSCGGRHDGGF*RAIESKRGRSEFATSVKGYIR*FGFSVFSGLWGEGILRHTFR**QSAPSGHTN*HSN**SV*FSAGGDFSQR*SDTVFVHSQVQREWG*SRLRHL*RREQQSLSE*TDVPGYVQT*R*AEGDGYRSV*VIYRWDGKCDRQRRGSRERVSSARDD*HIRIFSLQIW*GRIRSESNTGVPKD 12181
Range 4: 11581 to 11856 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
221.5 bits(477) | 0.0 | 91/92(99%) | 0/92(0%) | Plus/Plus |
Query 26 ARVWKIFIQILWWPS*RGVLARYRK*ERT*RICHKCQRLYSIVRIFGVQWPVGRRYIATYFPVVAICA*WTH*LTL*LMKCLIFSRW*FFPK 301 A VWKIFIQILWWPS*RGVLARYRK*ERT*RICHKCQRLYSIVRIFGVQWPVGRRYIATYFPVVAICA*WTH*LTL*LMKCLIFSRW*FFPK Subject 11581 APVWKIFIQILWWPS*RGVLARYRK*ERT*RICHKCQRLYSIVRIFGVQWPVGRRYIATYFPVVAICA*WTH*LTL*LMKCLIFSRW*FFPK 11856
Range 5: 11902 to 12180 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
201.8 bits(434) | 0.0 | 92/93(99%) | 0/93(0%) | Plus/Plus |
Query 347 GMKSSTASLKARTTEPF*MNRRSGVCPNVEVSRRRWISQCLSYLQMGR*V*SSTERKS*TSI*CQGRLTY*NL*STDLVGKK*KRKQYRST*R 625 GMKSSTASLKARTTEPF*MNRRSGVCPNVEVSRRRWISQCLSYLQMGR*V*SSTERKS*TSI*CQGRLTY*NL*STDLVGK *KRKQYRST*R Subject 11902 GMKSSTASLKARTTEPF*MNRRSGVCPNVEVSRRRWISQCLSYLQMGR*V*SSTERKS*TSI*CQGRLTY*NL*STDLVGKN*KRKQYRST*R 12180
Range 6: 11575 to 12030 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
336.5 bits(728) | 0.0 | 150/152(99%) | 0/152(0%) | Minus/Minus |
Query 20 IT*TLRYPSPSAHLYVWTYPGTSVHSEXXXXXXXXXXXXXLHPHSRCTCECTNTVSDYLWEKSPPAENQTLHQLEC*LVCPLGADCYYRKVCRNIPSPHRPLNTENPNYRI*PLTLVANSLRPLLLSIAR*NPPS*RPPQDLDKNFPNPCST 475 IT*TLRYPSPSAHLYVWTYPGTSVHSERLCCSRLQRCRRRLHPHSRCTCECTNTVSDYLWEKSPPAENQTLHQLEC*LVCPLGADCYYRKVCRNIPSPHRPLNTENPNYRI*PLTLVANSLRPLLLSIAR*NPPS*RPPQDLDKNFPN C T Subject 11575 IT*TLRYPSPSAHLYVWTYPGTSVHSERLCCSRLQRCRRRLHPHSRCTCECTNTVSDYLWEKSPPAENQTLHQLEC*LVCPLGADCYYRKVCRNIPSPHRPLNTENPNYRI*PLTLVANSLRPLLLSIAR*NPPS*RPPQDLDKNFPNRC*T 12030
Range 7: 12082 to 12180 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
58.8 bits(122) | 0.0 | 32/33(97%) | 0/33(0%) | Minus/Minus |
Query 527 SLGTPVXXXXXXLPYQICRLKILIC*SSLALDT 625 SLGTPVLLSLL+LPYQICRLKILIC*SSLALDT Subject 12082 SLGTPVLLSLLILPYQICRLKILIC*SSLALDT 12180
Range 8: 11936 to 12181 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
184.8 bits(397) | 0.0 | 81/82(99%) | 0/82(0%) | Minus/Minus |
Query 381 VFRYSGIAFASTSSLPDL*TKDSNMLVVPGTRYSFTTSSPLTITLTVPSVDNLNTAISISFGSPLRLDIPRNVGSFRKALLF 626 VFRYSGIAFAS SSLPDL*TKDSNMLVVPGTRYSFTTSSPLTITLTVPSVDNLNTAISISFGSPLRLDIPRNVGSFRKALLF Subject 11936 VFRYSGIAFASNSSLPDL*TKDSNMLVVPGTRYSFTTSSPLTITLTVPSVDNLNTAISISFGSPLRLDIPRNVGSFRKALLF 12181
Range 9: 11576 to 11767 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
150.0 bits(321) | 0.0 | 63/64(98%) | 0/64(0%) | Minus/Minus |
Query 21 PESMSQYTFAPQATEHRKSELSNITFDTCGKFATSSLTFDSALEPPVMTATTGSG*KFSKPVLH 212 PESMSQYTFAPQATEHRKSELSNITFDTCGKFATSSLTFDSALEPPVMTATTGSG*KFSKPVL+ Subject 11576 PESMSQYTFAPQATEHRKSELSNITFDTCGKFATSSLTFDSALEPPVMTATTGSG*KFSKPVLN 11767
Nucleotide Sequence (1013 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
782.8 | 4482.2 | 36% | 0 | 99% | GQ352632.1 | |
780.5 | 4460.2 | 36% | 0 | 98% | KX701860.1 | |
775.9 | 4456.5 | 36% | 0 | 98% | KX756668.1 | |
772.7 | 4438.2 | 36% | 0 | 98% | EU259806.1 | |
745.7 | 3827.9 | 36% | 0 | 79% | JX559645.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 623, complete genome
Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 9
Range 1: 12739 to 13746 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
782.8 bits(1702) | 0.0 | 331/336(99%) | 0/336(0%) | Minus/Plus |
Query 3 LGIQEGKYVDVTQNLESTIVPLRVMEIKKRRVSAHVALPKVVSAYVDLYTNLQELLSDEVTKARTDTVSAYAADSMAFLVKMLPLTAREQWLRDMLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIKSFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYRLRLTPVAALIIMLIYYSVYGTNATRIKRRPDFLNVRIRGKVEKVSLRGVEDRAYRISEKRGINAQRILCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRSMINHADHASIIHYIKTNENQVTGTTLP 1010 + +Q GKYVDVTQNLESTIVPLRVMEIKKRRVSAHVALPKVVSAYVDLYTNLQELLSDEVTKARTDTVSAYAADSMAFLVKMLPLTAREQWLRDMLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIKSFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYRLRLTPVAALIIMLIYYSVYGTNATRIKRRPDFLNVRI+GKVEKVSLRGVEDRAYRISEKRGINAQRILCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRSMINHADHASIIHYIKTNENQVTGTTLP Subject 12739 VSVQVGKYVDVTQNLESTIVPLRVMEIKKRRVSAHVALPKVVSAYVDLYTNLQELLSDEVTKARTDTVSAYAADSMAFLVKMLPLTAREQWLRDMLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIKSFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYRLRLTPVAALIIMLIYYSVYGTNATRIKRRPDFLNVRIKGKVEKVSLRGVEDRAYRISEKRGINAQRILCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRSMINHADHASIIHYIKTNENQVTGTTLP 13746
Range 2: 12747 to 13748 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
770.4 bits(1675) | 0.0 | 334/334(100%) | 0/334(0%) | Minus/Plus |
Query 1 SGGEVCGRNAEFRKYDRAVKSYGNKEEASIGARCFTEGGICIRRSLYELAGVAVR*SN*GQNRYSFGLRC*LYGFLS*DVAPDSP*AVVERHVRISASTKTTGKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTICAYRVLRPLSRAFILFL*VEL*DDDR*RGKDMPGDRREVGAPSNGGKL*VKINPSGGLNNYADLLLRLRHKRYQD*TTPRFPQCEDKRKSRESFVTGGRRSRL*NIRKARDKRSTYIV*VL**SHMSG*ATLRHSQKQLEDAELCRWYVGV*HG*LYNF*GEKYDQPCRSR*HYTLY*DERKPGYRDYSTT 1002 SGGEVCGRNAEFRKYDRAVKSYGNKEEASIGARCFTEGGICIRRSLYELAGVAVR*SN*GQNRYSFGLRC*LYGFLS*DVAPDSP*AVVERHVRISASTKTTGKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTICAYRVLRPLSRAFILFL*VEL*DDDR*RGKDMPGDRREVGAPSNGGKL*VKINPSGGLNNYADLLLRLRHKRYQD*TTPRFPQCEDKRKSRESFVTGGRRSRL*NIRKARDKRSTYIV*VL**SHMSG*ATLRHSQKQLEDAELCRWYVGV*HG*LYNF*GEKYDQPCRSR*HYTLY*DERKPGYRDYSTT Subject 12747 SGGEVCGRNAEFRKYDRAVKSYGNKEEASIGARCFTEGGICIRRSLYELAGVAVR*SN*GQNRYSFGLRC*LYGFLS*DVAPDSP*AVVERHVRISASTKTTGKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTICAYRVLRPLSRAFILFL*VEL*DDDR*RGKDMPGDRREVGAPSNGGKL*VKINPSGGLNNYADLLLRLRHKRYQD*TTPRFPQCEDKRKSRESFVTGGRRSRL*NIRKARDKRSTYIV*VL**SHMSG*ATLRHSQKQLEDAELCRWYVGV*HG*LYNF*GEKYDQPCRSR*HYTLY*DERKPGYRDYSTT 13748
Range 3: 12746 to 13747 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
765.4 bits(1664) | 0.0 | 334/334(100%) | 0/334(0%) | Plus/Minus |
Query 2 VVE*SR*PGFRSS*YSV*C*RDLHG*SYFSP*KLYNQPCHTPTYHLHNSASSNCFCECRNVA*PDM*DHYSTYTIYVERLSRAFLIFYRRDLLPPVTKLSRLFLLSSH*GNLGVV*SW*RLCRKRSSKSA*LLRPPLGLILTYNFPPLDGAPTSRRSPGISFPLYLSSSHNST*RNRMKARERGRRTL*AHMVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLPVVFVLADILTCLSTTAHGLSGATS*LRKP*SQQRRPKLYRFWP*LLHLTATPASSYKDLRMQIPPSVKQRAPILASSLFP*LLTARSYFLNSALRPHTSPPE 1003 VVE*SR*PGFRSS*YSV*C*RDLHG*SYFSP*KLYNQPCHTPTYHLHNSASSNCFCECRNVA*PDM*DHYSTYTIYVERLSRAFLIFYRRDLLPPVTKLSRLFLLSSH*GNLGVV*SW*RLCRKRSSKSA*LLRPPLGLILTYNFPPLDGAPTSRRSPGISFPLYLSSSHNST*RNRMKARERGRRTL*AHMVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLPVVFVLADILTCLSTTAHGLSGATS*LRKP*SQQRRPKLYRFWP*LLHLTATPASSYKDLRMQIPPSVKQRAPILASSLFP*LLTARSYFLNSALRPHTSPPE Subject 12746 VVE*SR*PGFRSS*YSV*C*RDLHG*SYFSP*KLYNQPCHTPTYHLHNSASSNCFCECRNVA*PDM*DHYSTYTIYVERLSRAFLIFYRRDLLPPVTKLSRLFLLSSH*GNLGVV*SW*RLCRKRSSKSA*LLRPPLGLILTYNFPPLDGAPTSRRSPGISFPLYLSSSHNST*RNRMKARERGRRTL*AHMVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLPVVFVLADILTCLSTTAHGLSGATS*LRKP*SQQRRPKLYRFWP*LLHLTATPASSYKDLRMQIPPSVKQRAPILASSLFP*LLTARSYFLNSALRPHTSPPE 13747
Range 4: 13051 to 13746 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
554.6 bits(1204) | 0.0 | 231/232(100%) | 0/232(0%) | Plus/Minus |
Query 3 W*SSPGNLVFVRLNIVYNASVICMVDHTSHLRSYTISRVIRQRTIYITQRLPIVSANAVMSPSQTCEITIVPTQYTLSVYPALF*YSIGAIFYPP*RNFLDFSSYPHIEEIWASFNPGSVCAVNGVVNQHNY*GRHWG*S*PIIFLH*TAHQLLGDLRAYLSPFTCRHLITQPREIG*KLVKGVEGLYRHIWF*VFNTPGCVLVEKRFYDQLERSDHVIYPSYSYVVGKICR 698 W*SSPGNLVFVRLNIVYNASVICMVDHTSHLRSYTISRVIRQRTIYITQRLPIVSANAVMSPSQTCEITIVPTQYTLSVYPALF*YSIGAIFYPP*RNFLDFS YPHIEEIWASFNPGSVCAVNGVVNQHNY*GRHWG*S*PIIFLH*TAHQLLGDLRAYLSPFTCRHLITQPREIG*KLVKGVEGLYRHIWF*VFNTPGCVLVEKRFYDQLERSDHVIYPSYSYVVGKICR Subject 13051 W*SSPGNLVFVRLNIVYNASVICMVDHTSHLRSYTISRVIRQRTIYITQRLPIVSANAVMSPSQTCEITIVPTQYTLSVYPALF*YSIGAIFYPP*RNFLDFSFYPHIEEIWASFNPGSVCAVNGVVNQHNY*GRHWG*S*PIIFLH*TAHQLLGDLRAYLSPFTCRHLITQPREIG*KLVKGVEGLYRHIWF*VFNTPGCVLVEKRFYDQLERSDHVIYPSYSYVVGKICR 13746
Range 5: 12745 to 13014 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
210.0 bits(452) | 0.0 | 89/90(99%) | 0/90(0%) | Plus/Minus |
Query 735 QPLLTGCQGQHLN*ESHRVSSVGRNCIGSGLSYFI*QQLLQVRIKIYVCRYHLR*SNVRRYSPLLYFHNS*RHDRTF*ILRYVHILPLLN 1004 QPLLTGCQGQHLN*ESHRVSSVGRNCIGSGLSYFI*QQLLQVRIKIYVCRYHLR*SNVRRYSPLLYFHNS*RHDRTF*ILRYVHILP LN Subject 12745 QPLLTGCQGQHLN*ESHRVSSVGRNCIGSGLSYFI*QQLLQVRIKIYVCRYHLR*SNVRRYSPLLYFHNS*RHDRTF*ILRYVHILPHLN 13014
Range 6: 13227 to 13748 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
376.3 bits(815) | 0.0 | 173/174(99%) | 0/174(0%) | Plus/Minus |
Query 1 CGRVVPVTWFSFVLI*CIMLA*SAWLIILLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNIR*AFIPRFSDIL*ARSSTPRNETFSTFPLILTLRKSGRRLILVAFVP*TE**ISIIIKAATGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVIS*LNL 522 CGRVVPVTWFSFVLI*CIMLA*SAWLIILLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNIR*AFIPRFSDIL*ARSSTPRNETFSTFP ILTLRKSGRRLILVAFVP*TE**ISIIIKAATGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVIS*LNL Subject 13227 CGRVVPVTWFSFVLI*CIMLA*SAWLIILLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNIR*AFIPRFSDIL*ARSSTPRNETFSTFPFILTLRKSGRRLILVAFVP*TE**ISIIIKAATGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVIS*LNL 13748
Range 7: 12747 to 13184 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
329.1 bits(712) | 0.0 | 145/146(99%) | 0/146(0%) | Plus/Minus |
Query 565 IGTYGFKSLIPPGVSLLKNDFMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPNMSLNHCSRAVRGNILTKKAIESAA*AETVSVLALVTSSDSNSCKFV*RSTYADTTFGKATCADTRLFFISITLNGTIVLSKFCVTSTYFPS* 1002 IGTYGFKSLIPPGVSLLKNDFMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPNMSLNHCSRAVRGNILTKKAIESAA*AETVSVLALVTSSDSNSCKFV*RSTYADTTFGKATCADTRLFFISITLNGTIVLSKFCVTSTYFP+* Subject 12747 IGTYGFKSLIPPGVSLLKNDFMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPNMSLNHCSRAVRGNILTKKAIESAA*AETVSVLALVTSSDSNSCKFV*RSTYADTTFGKATCADTRLFFISITLNGTIVLSKFCVTSTYFPT* 13184
Range 8: 12746 to 13594 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
614.1 bits(1334) | 0.0 | 281/283(99%) | 0/283(0%) | Minus/Plus |
Query 155 FRRGSMWT*RRI*KVRSCR*ELWK*RRGEXXXXXXXXXXXLHT*IFIRTCRSCCQMK*LRPEPIQFRPTLLTLWLS*LRCCP*QPVSSG*ETC*DIC*YEDDRQIFPTT*E*LGYMT*SLRSSWS*NRFSTRTHPGVLKT*NHMCL*SPSTPFTSFHPISLG*VMR*RQVKGERYARRSPRSWCAV*WRKIIG*D*PQWRP**LC*FTTPFTAQTLPGLNDAQISSM*G*EEKSRKFRYGG*KIAPIEYQKSAG*TLNVYCVGTIVISHVWLGDITAFAETIG 1003 FR GSMWT*RRI*KVRSCR*ELWK*RRGEYRRTLLYRRWYLHT*IFIRTCRSCCQMK*LRPEPIQFRPTLLTLWLS*LRCCP*QPVSSG*ETC*DIC*YEDDRQIFPTT*E*LGYMT*SLRSSWS*NRFSTRTHPGVLKT*NHMCL*SPSTPFTSFHPISLG*VMR*RQVKGERYARRSPRSWCAV*WRKIIG*D*PQWRP**LC*FTTPFTAQTLPGLNDAQISSM*G*+EKSRKFRYGG*KIAPIEYQKSAG*TLNVYCVGTIVISHVWLGDITAFAETIG Subject 12746 FRWGSMWT*RRI*KVRSCR*ELWK*RRGEYRRTLLYRRWYLHT*IFIRTCRSCCQMK*LRPEPIQFRPTLLTLWLS*LRCCP*QPVSSG*ETC*DIC*YEDDRQIFPTT*E*LGYMT*SLRSSWS*NRFSTRTHPGVLKT*NHMCL*SPSTPFTSFHPISLG*VMR*RQVKGERYARRSPRSWCAV*WRKIIG*D*PQWRP**LC*FTTPFTAQTLPGLNDAQISSM*G*KEKSRKFRYGG*KIAPIEYQKSAG*TLNVYCVGTIVISHVWLGDITAFAETIG 13594
Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome
Sequence ID: KX701860.1 Length: 18020 Number of Matches: 9
Range 1: 12257 to 13264 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
780.5 bits(1697) | 0.0 | 329/336(98%) | 0/336(0%) | Minus/Plus |
Query 3 LGIQEGKYVDVTQNLESTIVPLRVMEIKKRRVSAHVALPKVVSAYVDLYTNLQELLSDEVTKARTDTVSAYAADSMAFLVKMLPLTAREQWLRDMLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIKSFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYRLRLTPVAALIIMLIYYSVYGTNATRIKRRPDFLNVRIRGKVEKVSLRGVEDRAYRISEKRGINAQRILCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRSMINHADHASIIHYIKTNENQVTGTTLP 1010 + +Q GKYVD+TQNLESTIVPLRVMEIKKRRVSAHVALPKVVSAYVDLYTNLQELLSDEVTKARTDTVSAYA DSMAFLVKMLPLTAREQWLRDMLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIKSFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYRLRLTPVAALIIMLIYYSVYGTNATRIKRRPDFLNVRI+GKVEKVSLRGVEDRAYRISEKRGINAQRILCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRSMINHADHASIIHYIKTNENQVTGTTLP Subject 12257 VSVQVGKYVDITQNLESTIVPLRVMEIKKRRVSAHVALPKVVSAYVDLYTNLQELLSDEVTKARTDTVSAYATDSMAFLVKMLPLTAREQWLRDMLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIKSFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYRLRLTPVAALIIMLIYYSVYGTNATRIKRRPDFLNVRIKGKVEKVSLRGVEDRAYRISEKRGINAQRILCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRSMINHADHASIIHYIKTNENQVTGTTLP 13264
Range 2: 12265 to 13266 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
763.1 bits(1659) | 0.0 | 332/334(99%) | 0/334(0%) | Minus/Plus |
Query 1 SGGEVCGRNAEFRKYDRAVKSYGNKEEASIGARCFTEGGICIRRSLYELAGVAVR*SN*GQNRYSFGLRC*LYGFLS*DVAPDSP*AVVERHVRISASTKTTGKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTICAYRVLRPLSRAFILFL*VEL*DDDR*RGKDMPGDRREVGAPSNGGKL*VKINPSGGLNNYADLLLRLRHKRYQD*TTPRFPQCEDKRKSRESFVTGGRRSRL*NIRKARDKRSTYIV*VL**SHMSG*ATLRHSQKQLEDAELCRWYVGV*HG*LYNF*GEKYDQPCRSR*HYTLY*DERKPGYRDYSTT 1002 SGGEVCG NAEFRKYDRAVKSYGNKEEASIGARCFTEGGICIRRSLYELAGVAVR*SN*GQNRYSFGLR *LYGFLS*DVAPDSP*AVVERHVRISASTKTTGKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTICAYRVLRPLSRAFILFL*VEL*DDDR*RGKDMPGDRREVGAPSNGGKL*VKINPSGGLNNYADLLLRLRHKRYQD*TTPRFPQCEDKRKSRESFVTGGRRSRL*NIRKARDKRSTYIV*VL**SHMSG*ATLRHSQKQLEDAELCRWYVGV*HG*LYNF*GEKYDQPCRSR*HYTLY*DERKPGYRDYSTT Subject 12265 SGGEVCGHNAEFRKYDRAVKSYGNKEEASIGARCFTEGGICIRRSLYELAGVAVR*SN*GQNRYSFGLRY*LYGFLS*DVAPDSP*AVVERHVRISASTKTTGKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTICAYRVLRPLSRAFILFL*VEL*DDDR*RGKDMPGDRREVGAPSNGGKL*VKINPSGGLNNYADLLLRLRHKRYQD*TTPRFPQCEDKRKSRESFVTGGRRSRL*NIRKARDKRSTYIV*VL**SHMSG*ATLRHSQKQLEDAELCRWYVGV*HG*LYNF*GEKYDQPCRSR*HYTLY*DERKPGYRDYSTT 13266
Range 3: 12264 to 13265 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
757.6 bits(1647) | 0.0 | 332/334(99%) | 0/334(0%) | Plus/Minus |
Query 2 VVE*SR*PGFRSS*YSV*C*RDLHG*SYFSP*KLYNQPCHTPTYHLHNSASSNCFCECRNVA*PDM*DHYSTYTIYVERLSRAFLIFYRRDLLPPVTKLSRLFLLSSH*GNLGVV*SW*RLCRKRSSKSA*LLRPPLGLILTYNFPPLDGAPTSRRSPGISFPLYLSSSHNST*RNRMKARERGRRTL*AHMVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLPVVFVLADILTCLSTTAHGLSGATS*LRKP*SQQRRPKLYRFWP*LLHLTATPASSYKDLRMQIPPSVKQRAPILASSLFP*LLTARSYFLNSALRPHTSPPE 1003 VVE*SR*PGFRSS*YSV*C*RDLHG*SYFSP*KLYNQPCHTPTYHLHNSASSNCFCECRNVA*PDM*DHYSTYTIYVERLSRAFLIFYRRDLLPPVTKLSRLFLLSSH*GNLGVV*SW*RLCRKRSSKSA*LLRPPLGLILTYNFPPLDGAPTSRRSPGISFPLYLSSSHNST*RNRMKARERGRRTL*AHMVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLPVVFVLADILTCLSTTAHGLSGATS*LRKP*SQ RRPKLYRFWP*LLHLTATPASSYKDLRMQIPPSVKQRAPILASSLFP*LLTARSYFLNSAL PHTSPPE Subject 12264 VVE*SR*PGFRSS*YSV*C*RDLHG*SYFSP*KLYNQPCHTPTYHLHNSASSNCFCECRNVA*PDM*DHYSTYTIYVERLSRAFLIFYRRDLLPPVTKLSRLFLLSSH*GNLGVV*SW*RLCRKRSSKSA*LLRPPLGLILTYNFPPLDGAPTSRRSPGISFPLYLSSSHNST*RNRMKARERGRRTL*AHMVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLPVVFVLADILTCLSTTAHGLSGATS*LRKP*SQ*RRPKLYRFWP*LLHLTATPASSYKDLRMQIPPSVKQRAPILASSLFP*LLTARSYFLNSALCPHTSPPE 13265
Range 4: 12569 to 13264 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
554.6 bits(1204) | 0.0 | 231/232(100%) | 0/232(0%) | Plus/Minus |
Query 3 W*SSPGNLVFVRLNIVYNASVICMVDHTSHLRSYTISRVIRQRTIYITQRLPIVSANAVMSPSQTCEITIVPTQYTLSVYPALF*YSIGAIFYPP*RNFLDFSSYPHIEEIWASFNPGSVCAVNGVVNQHNY*GRHWG*S*PIIFLH*TAHQLLGDLRAYLSPFTCRHLITQPREIG*KLVKGVEGLYRHIWF*VFNTPGCVLVEKRFYDQLERSDHVIYPSYSYVVGKICR 698 W*SSPGNLVFVRLNIVYNASVICMVDHTSHLRSYTISRVIRQRTIYITQRLPIVSANAVMSPSQTCEITIVPTQYTLSVYPALF*YSIGAIFYPP*RNFLDFS YPHIEEIWASFNPGSVCAVNGVVNQHNY*GRHWG*S*PIIFLH*TAHQLLGDLRAYLSPFTCRHLITQPREIG*KLVKGVEGLYRHIWF*VFNTPGCVLVEKRFYDQLERSDHVIYPSYSYVVGKICR Subject 12569 W*SSPGNLVFVRLNIVYNASVICMVDHTSHLRSYTISRVIRQRTIYITQRLPIVSANAVMSPSQTCEITIVPTQYTLSVYPALF*YSIGAIFYPP*RNFLDFSFYPHIEEIWASFNPGSVCAVNGVVNQHNY*GRHWG*S*PIIFLH*TAHQLLGDLRAYLSPFTCRHLITQPREIG*KLVKGVEGLYRHIWF*VFNTPGCVLVEKRFYDQLERSDHVIYPSYSYVVGKICR 13264
Range 5: 12263 to 12532 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
210.0 bits(452) | 0.0 | 89/90(99%) | 0/90(0%) | Plus/Minus |
Query 735 QPLLTGCQGQHLN*ESHRVSSVGRNCIGSGLSYFI*QQLLQVRIKIYVCRYHLR*SNVRRYSPLLYFHNS*RHDRTF*ILRYVHILPLLN 1004 QPLLTGCQGQHLN*ESHRVSSVGRNCIGSGLSYFI*QQLLQVRIKIYVCRYHLR*SNVRRYSPLLYFHNS*RHDRTF*ILRYVHILP LN Subject 12263 QPLLTGCQGQHLN*ESHRVSSVGRNCIGSGLSYFI*QQLLQVRIKIYVCRYHLR*SNVRRYSPLLYFHNS*RHDRTF*ILRYVHILPHLN 12532
Range 6: 12745 to 13266 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
376.3 bits(815) | 0.0 | 173/174(99%) | 0/174(0%) | Plus/Minus |
Query 1 CGRVVPVTWFSFVLI*CIMLA*SAWLIILLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNIR*AFIPRFSDIL*ARSSTPRNETFSTFPLILTLRKSGRRLILVAFVP*TE**ISIIIKAATGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVIS*LNL 522 CGRVVPVTWFSFVLI*CIMLA*SAWLIILLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNIR*AFIPRFSDIL*ARSSTPRNETFSTFP ILTLRKSGRRLILVAFVP*TE**ISIIIKAATGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVIS*LNL Subject 12745 CGRVVPVTWFSFVLI*CIMLA*SAWLIILLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNIR*AFIPRFSDIL*ARSSTPRNETFSTFPFILTLRKSGRRLILVAFVP*TE**ISIIIKAATGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVIS*LNL 13266
Range 7: 12265 to 12702 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
324.6 bits(702) | 0.0 | 143/146(98%) | 0/146(0%) | Plus/Minus |
Query 565 IGTYGFKSLIPPGVSLLKNDFMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPNMSLNHCSRAVRGNILTKKAIESAA*AETVSVLALVTSSDSNSCKFV*RSTYADTTFGKATCADTRLFFISITLNGTIVLSKFCVTSTYFPS* 1002 IGTYGFKSLIPPGVSLLKNDFMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPNMSLNHCSRAVRGNILTKKAIES A*AETVSVLALVTSSDSNSCKFV*RSTYADTTFGKATCADTRLFFISITLNGTIVLSKFCV STYFP+* Subject 12265 IGTYGFKSLIPPGVSLLKNDFMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPNMSLNHCSRAVRGNILTKKAIESVA*AETVSVLALVTSSDSNSCKFV*RSTYADTTFGKATCADTRLFFISITLNGTIVLSKFCVMSTYFPT* 12702
Range 8: 12264 to 13112 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
614.1 bits(1334) | 0.0 | 281/283(99%) | 0/283(0%) | Minus/Plus |
Query 155 FRRGSMWT*RRI*KVRSCR*ELWK*RRGEXXXXXXXXXXXLHT*IFIRTCRSCCQMK*LRPEPIQFRPTLLTLWLS*LRCCP*QPVSSG*ETC*DIC*YEDDRQIFPTT*E*LGYMT*SLRSSWS*NRFSTRTHPGVLKT*NHMCL*SPSTPFTSFHPISLG*VMR*RQVKGERYARRSPRSWCAV*WRKIIG*D*PQWRP**LC*FTTPFTAQTLPGLNDAQISSM*G*EEKSRKFRYGG*KIAPIEYQKSAG*TLNVYCVGTIVISHVWLGDITAFAETIG 1003 FR GSMWT*RRI*KVRSCR*ELWK*RRGEYRRTLLYRRWYLHT*IFIRTCRSCCQMK*LRPEPIQFRPTLLTLWLS*LRCCP*QPVSSG*ETC*DIC*YEDDRQIFPTT*E*LGYMT*SLRSSWS*NRFSTRTHPGVLKT*NHMCL*SPSTPFTSFHPISLG*VMR*RQVKGERYARRSPRSWCAV*WRKIIG*D*PQWRP**LC*FTTPFTAQTLPGLNDAQISSM*G*+EKSRKFRYGG*KIAPIEYQKSAG*TLNVYCVGTIVISHVWLGDITAFAETIG Subject 12264 FRWGSMWT*RRI*KVRSCR*ELWK*RRGEYRRTLLYRRWYLHT*IFIRTCRSCCQMK*LRPEPIQFRPTLLTLWLS*LRCCP*QPVSSG*ETC*DIC*YEDDRQIFPTT*E*LGYMT*SLRSSWS*NRFSTRTHPGVLKT*NHMCL*SPSTPFTSFHPISLG*VMR*RQVKGERYARRSPRSWCAV*WRKIIG*D*PQWRP**LC*FTTPFTAQTLPGLNDAQISSM*G*KEKSRKFRYGG*KIAPIEYQKSAG*TLNVYCVGTIVISHVWLGDITAFAETIG 13112
Grapevine leafroll associated virus 3 isolate TC BR, complete genome
Sequence ID: KX756668.1 Length: 18498 Number of Matches: 9
Range 1: 12739 to 13746 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
775.9 bits(1687) | 0.0 | 329/336(98%) | 0/336(0%) | Minus/Plus |
Query 3 LGIQEGKYVDVTQNLESTIVPLRVMEIKKRRVSAHVALPKVVSAYVDLYTNLQELLSDEVTKARTDTVSAYAADSMAFLVKMLPLTAREQWLRDMLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIKSFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYRLRLTPVAALIIMLIYYSVYGTNATRIKRRPDFLNVRIRGKVEKVSLRGVEDRAYRISEKRGINAQRILCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRSMINHADHASIIHYIKTNENQVTGTTLP 1010 + +Q GKYVDVTQNLESTIVPLRVMEIKKRRVSAHVALPKVVSAYVDLYTNLQELLSDEVTKARTDTVSAYA DSMAFLVKMLPLTAREQWLRDMLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIKSFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYRLRLTPVAALIIMLIYYSVYGTNATRIKRRPDFLNVRI+GKVEKVSLRGVEDRAYRISEKRGINAQRILCRYYSDLT LARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRSMINHADHASIIHYIKTNENQVTGTTLP Subject 12739 VSVQVGKYVDVTQNLESTIVPLRVMEIKKRRVSAHVALPKVVSAYVDLYTNLQELLSDEVTKARTDTVSAYATDSMAFLVKMLPLTAREQWLRDMLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIKSFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYRLRLTPVAALIIMLIYYSVYGTNATRIKRRPDFLNVRIKGKVEKVSLRGVEDRAYRISEKRGINAQRILCRYYSDLTYLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRSMINHADHASIIHYIKTNENQVTGTTLP 13746
Range 2: 12747 to 13748 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
763.5 bits(1660) | 0.0 | 332/334(99%) | 0/334(0%) | Minus/Plus |
Query 1 SGGEVCGRNAEFRKYDRAVKSYGNKEEASIGARCFTEGGICIRRSLYELAGVAVR*SN*GQNRYSFGLRC*LYGFLS*DVAPDSP*AVVERHVRISASTKTTGKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTICAYRVLRPLSRAFILFL*VEL*DDDR*RGKDMPGDRREVGAPSNGGKL*VKINPSGGLNNYADLLLRLRHKRYQD*TTPRFPQCEDKRKSRESFVTGGRRSRL*NIRKARDKRSTYIV*VL**SHMSG*ATLRHSQKQLEDAELCRWYVGV*HG*LYNF*GEKYDQPCRSR*HYTLY*DERKPGYRDYSTT 1002 SGGEVCGRNAEFRKYDRAVKSYGNKEEASIGARCFTEGGICIRRSLYELAGVAVR*SN*GQNRYSFGLR *LYGFLS*DVAPDSP*AVVERHVRISASTKTTGKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTICAYRVLRPLSRAFILFL*VEL*DDDR*RGKDMPGDRREVGAPSNGGKL*VKINPSGGLNNYADLLLRLRHKRYQD*TTPRFPQCEDKRKSRESFVTGGRRSRL*NIRKARDKRSTYIV*VL**SH+SG*ATLRHSQKQLEDAELCRWYVGV*HG*LYNF*GEKYDQPCRSR*HYTLY*DERKPGYRDYSTT Subject 12747 SGGEVCGRNAEFRKYDRAVKSYGNKEEASIGARCFTEGGICIRRSLYELAGVAVR*SN*GQNRYSFGLRY*LYGFLS*DVAPDSP*AVVERHVRISASTKTTGKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTICAYRVLRPLSRAFILFL*VEL*DDDR*RGKDMPGDRREVGAPSNGGKL*VKINPSGGLNNYADLLLRLRHKRYQD*TTPRFPQCEDKRKSRESFVTGGRRSRL*NIRKARDKRSTYIV*VL**SHISG*ATLRHSQKQLEDAELCRWYVGV*HG*LYNF*GEKYDQPCRSR*HYTLY*DERKPGYRDYSTT 13748
Range 3: 12746 to 13747 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
761.2 bits(1655) | 0.0 | 333/334(100%) | 0/334(0%) | Plus/Minus |
Query 2 VVE*SR*PGFRSS*YSV*C*RDLHG*SYFSP*KLYNQPCHTPTYHLHNSASSNCFCECRNVA*PDM*DHYSTYTIYVERLSRAFLIFYRRDLLPPVTKLSRLFLLSSH*GNLGVV*SW*RLCRKRSSKSA*LLRPPLGLILTYNFPPLDGAPTSRRSPGISFPLYLSSSHNST*RNRMKARERGRRTL*AHMVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLPVVFVLADILTCLSTTAHGLSGATS*LRKP*SQQRRPKLYRFWP*LLHLTATPASSYKDLRMQIPPSVKQRAPILASSLFP*LLTARSYFLNSALRPHTSPPE 1003 VVE*SR*PGFRSS*YSV*C*RDLHG*SYFSP*KLYNQPCHTPTYHLHNSASSNCFCECRNVA*PDM*DHYSTYTIYVERLSRAFLIFYRRDLLPPVTKLSRLFLLSSH*GNLGVV*SW*RLCRKRSSKSA*LLRPPLGLILTYNFPPLDGAPTSRRSPGISFPLYLSSSHNST*RNRMKARERGRRTL*AHMVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLPVVFVLADILTCLSTTAHGLSGATS*LRKP*SQ RRPKLYRFWP*LLHLTATPASSYKDLRMQIPPSVKQRAPILASSLFP*LLTARSYFLNSALRPHTSPPE Subject 12746 VVE*SR*PGFRSS*YSV*C*RDLHG*SYFSP*KLYNQPCHTPTYHLHNSASSNCFCECRNVA*PDM*DHYSTYTIYVERLSRAFLIFYRRDLLPPVTKLSRLFLLSSH*GNLGVV*SW*RLCRKRSSKSA*LLRPPLGLILTYNFPPLDGAPTSRRSPGISFPLYLSSSHNST*RNRMKARERGRRTL*AHMVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLPVVFVLADILTCLSTTAHGLSGATS*LRKP*SQ*RRPKLYRFWP*LLHLTATPASSYKDLRMQIPPSVKQRAPILASSLFP*LLTARSYFLNSALRPHTSPPE 13747
Range 4: 13051 to 13746 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
551.8 bits(1198) | 0.0 | 230/232(99%) | 0/232(0%) | Plus/Minus |
Query 3 W*SSPGNLVFVRLNIVYNASVICMVDHTSHLRSYTISRVIRQRTIYITQRLPIVSANAVMSPSQTCEITIVPTQYTLSVYPALF*YSIGAIFYPP*RNFLDFSSYPHIEEIWASFNPGSVCAVNGVVNQHNY*GRHWG*S*PIIFLH*TAHQLLGDLRAYLSPFTCRHLITQPREIG*KLVKGVEGLYRHIWF*VFNTPGCVLVEKRFYDQLERSDHVIYPSYSYVVGKICR 698 W*SSPGNLVFVRLNIVYNASVICMVDHTSHLRSYTISRVIRQRTIYITQRLPIVSANAVMSPSQ CEITIVPTQYTLSVYPALF*YSIGAIFYPP*RNFLDFS YPHIEEIWASFNPGSVCAVNGVVNQHNY*GRHWG*S*PIIFLH*TAHQLLGDLRAYLSPFTCRHLITQPREIG*KLVKGVEGLYRHIWF*VFNTPGCVLVEKRFYDQLERSDHVIYPSYSYVVGKICR Subject 13051 W*SSPGNLVFVRLNIVYNASVICMVDHTSHLRSYTISRVIRQRTIYITQRLPIVSANAVMSPSQICEITIVPTQYTLSVYPALF*YSIGAIFYPP*RNFLDFSFYPHIEEIWASFNPGSVCAVNGVVNQHNY*GRHWG*S*PIIFLH*TAHQLLGDLRAYLSPFTCRHLITQPREIG*KLVKGVEGLYRHIWF*VFNTPGCVLVEKRFYDQLERSDHVIYPSYSYVVGKICR 13746
Range 5: 12745 to 13014 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
210.0 bits(452) | 0.0 | 89/90(99%) | 0/90(0%) | Plus/Minus |
Query 735 QPLLTGCQGQHLN*ESHRVSSVGRNCIGSGLSYFI*QQLLQVRIKIYVCRYHLR*SNVRRYSPLLYFHNS*RHDRTF*ILRYVHILPLLN 1004 QPLLTGCQGQHLN*ESHRVSSVGRNCIGSGLSYFI*QQLLQVRIKIYVCRYHLR*SNVRRYSPLLYFHNS*RHDRTF*ILRYVHILP LN Subject 12745 QPLLTGCQGQHLN*ESHRVSSVGRNCIGSGLSYFI*QQLLQVRIKIYVCRYHLR*SNVRRYSPLLYFHNS*RHDRTF*ILRYVHILPHLN 13014
Range 6: 13227 to 13748 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
373.6 bits(809) | 0.0 | 172/174(99%) | 0/174(0%) | Plus/Minus |
Query 1 CGRVVPVTWFSFVLI*CIMLA*SAWLIILLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNIR*AFIPRFSDIL*ARSSTPRNETFSTFPLILTLRKSGRRLILVAFVP*TE**ISIIIKAATGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVIS*LNL 522 CGRVVPVTWFSFVLI*CIMLA*SAWLIILLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLAR+VRSL*YLHNIR*AFIPRFSDIL*ARSSTPRNETFSTFP ILTLRKSGRRLILVAFVP*TE**ISIIIKAATGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVIS*LNL Subject 13227 CGRVVPVTWFSFVLI*CIMLA*SAWLIILLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARYVRSL*YLHNIR*AFIPRFSDIL*ARSSTPRNETFSTFPFILTLRKSGRRLILVAFVP*TE**ISIIIKAATGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVIS*LNL 13748
Range 7: 12747 to 13184 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
327.3 bits(708) | 0.0 | 144/146(99%) | 0/146(0%) | Plus/Minus |
Query 565 IGTYGFKSLIPPGVSLLKNDFMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPNMSLNHCSRAVRGNILTKKAIESAA*AETVSVLALVTSSDSNSCKFV*RSTYADTTFGKATCADTRLFFISITLNGTIVLSKFCVTSTYFPS* 1002 IGTYGFKSLIPPGVSLLKNDFMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPNMSLNHCSRAVRGNILTKKAIES A*AETVSVLALVTSSDSNSCKFV*RSTYADTTFGKATCADTRLFFISITLNGTIVLSKFCVTSTYFP+* Subject 12747 IGTYGFKSLIPPGVSLLKNDFMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPNMSLNHCSRAVRGNILTKKAIESVA*AETVSVLALVTSSDSNSCKFV*RSTYADTTFGKATCADTRLFFISITLNGTIVLSKFCVTSTYFPT* 13184
Range 8: 12746 to 13594 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
613.7 bits(1333) | 0.0 | 280/283(99%) | 0/283(0%) | Minus/Plus |
Query 155 FRRGSMWT*RRI*KVRSCR*ELWK*RRGEXXXXXXXXXXXLHT*IFIRTCRSCCQMK*LRPEPIQFRPTLLTLWLS*LRCCP*QPVSSG*ETC*DIC*YEDDRQIFPTT*E*LGYMT*SLRSSWS*NRFSTRTHPGVLKT*NHMCL*SPSTPFTSFHPISLG*VMR*RQVKGERYARRSPRSWCAV*WRKIIG*D*PQWRP**LC*FTTPFTAQTLPGLNDAQISSM*G*EEKSRKFRYGG*KIAPIEYQKSAG*TLNVYCVGTIVISHVWLGDITAFAETIG 1003 FR GSMWT*RRI*KVRSCR*ELWK*RRGEYRRTLLYRRWYLHT*IFIRTCRSCCQMK*LRPEPIQFRPTLLTLWLS*LRCCP*QPVSSG*ETC*DIC*YEDDRQIFPTT*E*LGYMT*SLRSSWS*NRFSTRTHPGVLKT*NHMCL*SPSTPFTSFHPISLG*VMR*RQVKGERYARRSPRSWCAV*WRKIIG*D*PQWRP**LC*FTTPFTAQTLPGLNDAQISSM*G*+EKSRKFRYGG*KIAPIEYQKSAG*TLNVYCVGTIVISH+WLGDITAFAETIG Subject 12746 FRWGSMWT*RRI*KVRSCR*ELWK*RRGEYRRTLLYRRWYLHT*IFIRTCRSCCQMK*LRPEPIQFRPTLLTLWLS*LRCCP*QPVSSG*ETC*DIC*YEDDRQIFPTT*E*LGYMT*SLRSSWS*NRFSTRTHPGVLKT*NHMCL*SPSTPFTSFHPISLG*VMR*RQVKGERYARRSPRSWCAV*WRKIIG*D*PQWRP**LC*FTTPFTAQTLPGLNDAQISSM*G*KEKSRKFRYGG*KIAPIEYQKSAG*TLNVYCVGTIVISHIWLGDITAFAETIG 13594
Grapevine leafroll associated virus 3 isolate GP18, complete genome
Sequence ID: EU259806.1 Length: 18498 Number of Matches: 9
Range 1: 12739 to 13746 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
772.7 bits(1680) | 0.0 | 328/336(98%) | 0/336(0%) | Minus/Plus |
Query 3 LGIQEGKYVDVTQNLESTIVPLRVMEIKKRRVSAHVALPKVVSAYVDLYTNLQELLSDEVTKARTDTVSAYAADSMAFLVKMLPLTAREQWLRDMLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIKSFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYRLRLTPVAALIIMLIYYSVYGTNATRIKRRPDFLNVRIRGKVEKVSLRGVEDRAYRISEKRGINAQRILCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRSMINHADHASIIHYIKTNENQVTGTTLP 1010 + +Q GKYVDVTQNLESTIVPLRVMEIKKRRVSAHVALPKVVSAYVDLYTNLQELLSDEVTKARTDTVSAYA SMAFLVKMLPLTAREQWLRDMLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIKSFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYRLRLTPVAALIIMLIYYSVYGTNATRIKRRPDFLNVRI+GKVEKVSLRGVEDRAYRISEKRGINAQRILCRYYSDLT LARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRSMINHADHASIIHYIKTNENQVTGTTLP Subject 12739 VSVQVGKYVDVTQNLESTIVPLRVMEIKKRRVSAHVALPKVVSAYVDLYTNLQELLSDEVTKARTDTVSAYATGSMAFLVKMLPLTAREQWLRDMLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIKSFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYRLRLTPVAALIIMLIYYSVYGTNATRIKRRPDFLNVRIKGKVEKVSLRGVEDRAYRISEKRGINAQRILCRYYSDLTYLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRSMINHADHASIIHYIKTNENQVTGTTLP 13746
Range 2: 12747 to 13748 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
761.2 bits(1655) | 0.0 | 331/334(99%) | 0/334(0%) | Minus/Plus |
Query 1 SGGEVCGRNAEFRKYDRAVKSYGNKEEASIGARCFTEGGICIRRSLYELAGVAVR*SN*GQNRYSFGLRC*LYGFLS*DVAPDSP*AVVERHVRISASTKTTGKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTICAYRVLRPLSRAFILFL*VEL*DDDR*RGKDMPGDRREVGAPSNGGKL*VKINPSGGLNNYADLLLRLRHKRYQD*TTPRFPQCEDKRKSRESFVTGGRRSRL*NIRKARDKRSTYIV*VL**SHMSG*ATLRHSQKQLEDAELCRWYVGV*HG*LYNF*GEKYDQPCRSR*HYTLY*DERKPGYRDYSTT 1002 SGGEVCGRNAEFRKYDRAVKSYGNKEEASIGARCFTEGGICIRRSLYELAGVAVR*SN*GQNRYSFGLR LYGFLS*DVAPDSP*AVVERHVRISASTKTTGKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTICAYRVLRPLSRAFILFL*VEL*DDDR*RGKDMPGDRREVGAPSNGGKL*VKINPSGGLNNYADLLLRLRHKRYQD*TTPRFPQCEDKRKSRESFVTGGRRSRL*NIRKARDKRSTYIV*VL**SH+SG*ATLRHSQKQLEDAELCRWYVGV*HG*LYNF*GEKYDQPCRSR*HYTLY*DERKPGYRDYSTT Subject 12747 SGGEVCGRNAEFRKYDRAVKSYGNKEEASIGARCFTEGGICIRRSLYELAGVAVR*SN*GQNRYSFGLRYWLYGFLS*DVAPDSP*AVVERHVRISASTKTTGKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTICAYRVLRPLSRAFILFL*VEL*DDDR*RGKDMPGDRREVGAPSNGGKL*VKINPSGGLNNYADLLLRLRHKRYQD*TTPRFPQCEDKRKSRESFVTGGRRSRL*NIRKARDKRSTYIV*VL**SHISG*ATLRHSQKQLEDAELCRWYVGV*HG*LYNF*GEKYDQPCRSR*HYTLY*DERKPGYRDYSTT 13748
Range 3: 12746 to 13747 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
758.9 bits(1650) | 0.0 | 332/334(99%) | 0/334(0%) | Plus/Minus |
Query 2 VVE*SR*PGFRSS*YSV*C*RDLHG*SYFSP*KLYNQPCHTPTYHLHNSASSNCFCECRNVA*PDM*DHYSTYTIYVERLSRAFLIFYRRDLLPPVTKLSRLFLLSSH*GNLGVV*SW*RLCRKRSSKSA*LLRPPLGLILTYNFPPLDGAPTSRRSPGISFPLYLSSSHNST*RNRMKARERGRRTL*AHMVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLPVVFVLADILTCLSTTAHGLSGATS*LRKP*SQQRRPKLYRFWP*LLHLTATPASSYKDLRMQIPPSVKQRAPILASSLFP*LLTARSYFLNSALRPHTSPPE 1003 VVE*SR*PGFRSS*YSV*C*RDLHG*SYFSP*KLYNQPCHTPTYHLHNSASSNCFCECR+VA*PDM*DHYSTYTIYVERLSRAFLIFYRRDLLPPVTKLSRLFLLSSH*GNLGVV*SW*RLCRKRSSKSA*LLRPPLGLILTYNFPPLDGAPTSRRSPGISFPLYLSSSHNST*RNRMKARERGRRTL*AHMVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLPVVFVLADILTCLSTTAHGLSGATS*LRKP*SQ RRPKLYRFWP*LLHLTATPASSYKDLRMQIPPSVKQRAPILASSLFP*LLTARSYFLNSALRPHTSPPE Subject 12746 VVE*SR*PGFRSS*YSV*C*RDLHG*SYFSP*KLYNQPCHTPTYHLHNSASSNCFCECRSVA*PDM*DHYSTYTIYVERLSRAFLIFYRRDLLPPVTKLSRLFLLSSH*GNLGVV*SW*RLCRKRSSKSA*LLRPPLGLILTYNFPPLDGAPTSRRSPGISFPLYLSSSHNST*RNRMKARERGRRTL*AHMVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLPVVFVLADILTCLSTTAHGLSGATS*LRKP*SQ*RRPKLYRFWP*LLHLTATPASSYKDLRMQIPPSVKQRAPILASSLFP*LLTARSYFLNSALRPHTSPPE 13747
Range 4: 13051 to 13746 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
550.0 bits(1194) | 0.0 | 229/232(99%) | 0/232(0%) | Plus/Minus |
Query 3 W*SSPGNLVFVRLNIVYNASVICMVDHTSHLRSYTISRVIRQRTIYITQRLPIVSANAVMSPSQTCEITIVPTQYTLSVYPALF*YSIGAIFYPP*RNFLDFSSYPHIEEIWASFNPGSVCAVNGVVNQHNY*GRHWG*S*PIIFLH*TAHQLLGDLRAYLSPFTCRHLITQPREIG*KLVKGVEGLYRHIWF*VFNTPGCVLVEKRFYDQLERSDHVIYPSYSYVVGKICR 698 W*SSPGNLVFVRLNIVYNASVICMVDHTSHLRSYTISRVIRQRTIYITQRLPIVSANAV+SPSQ CEITIVPTQYTLSVYPALF*YSIGAIFYPP*RNFLDFS YPHIEEIWASFNPGSVCAVNGVVNQHNY*GRHWG*S*PIIFLH*TAHQLLGDLRAYLSPFTCRHLITQPREIG*KLVKGVEGLYRHIWF*VFNTPGCVLVEKRFYDQLERSDHVIYPSYSYVVGKICR Subject 13051 W*SSPGNLVFVRLNIVYNASVICMVDHTSHLRSYTISRVIRQRTIYITQRLPIVSANAVVSPSQICEITIVPTQYTLSVYPALF*YSIGAIFYPP*RNFLDFSFYPHIEEIWASFNPGSVCAVNGVVNQHNY*GRHWG*S*PIIFLH*TAHQLLGDLRAYLSPFTCRHLITQPREIG*KLVKGVEGLYRHIWF*VFNTPGCVLVEKRFYDQLERSDHVIYPSYSYVVGKICR 13746
Range 5: 12745 to 13014 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
208.2 bits(448) | 0.0 | 88/90(98%) | 0/90(0%) | Plus/Minus |
Query 735 QPLLTGCQGQHLN*ESHRVSSVGRNCIGSGLSYFI*QQLLQVRIKIYVCRYHLR*SNVRRYSPLLYFHNS*RHDRTF*ILRYVHILPLLN 1004 QPLLTGCQGQHLN*ESHR SSVGRNCIGSGLSYFI*QQLLQVRIKIYVCRYHLR*SNVRRYSPLLYFHNS*RHDRTF*ILRYVHILP LN Subject 12745 QPLLTGCQGQHLN*ESHRASSVGRNCIGSGLSYFI*QQLLQVRIKIYVCRYHLR*SNVRRYSPLLYFHNS*RHDRTF*ILRYVHILPHLN 13014
Range 6: 13227 to 13748 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
373.6 bits(809) | 0.0 | 172/174(99%) | 0/174(0%) | Plus/Minus |
Query 1 CGRVVPVTWFSFVLI*CIMLA*SAWLIILLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNIR*AFIPRFSDIL*ARSSTPRNETFSTFPLILTLRKSGRRLILVAFVP*TE**ISIIIKAATGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVIS*LNL 522 CGRVVPVTWFSFVLI*CIMLA*SAWLIILLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLAR+VRSL*YLHNIR*AFIPRFSDIL*ARSSTPRNETFSTFP ILTLRKSGRRLILVAFVP*TE**ISIIIKAATGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVIS*LNL Subject 13227 CGRVVPVTWFSFVLI*CIMLA*SAWLIILLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARYVRSL*YLHNIR*AFIPRFSDIL*ARSSTPRNETFSTFPFILTLRKSGRRLILVAFVP*TE**ISIIIKAATGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVIS*LNL 13748
Range 7: 12747 to 13184 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
325.0 bits(703) | 0.0 | 143/146(98%) | 0/146(0%) | Plus/Minus |
Query 565 IGTYGFKSLIPPGVSLLKNDFMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPNMSLNHCSRAVRGNILTKKAIESAA*AETVSVLALVTSSDSNSCKFV*RSTYADTTFGKATCADTRLFFISITLNGTIVLSKFCVTSTYFPS* 1002 IGTYGFKSLIPPGVSLLKNDFMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPNMSLNHCSRAVRGNILTKKAIE A*AETVSVLALVTSSDSNSCKFV*RSTYADTTFGKATCADTRLFFISITLNGTIVLSKFCVTSTYFP+* Subject 12747 IGTYGFKSLIPPGVSLLKNDFMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPNMSLNHCSRAVRGNILTKKAIEPVA*AETVSVLALVTSSDSNSCKFV*RSTYADTTFGKATCADTRLFFISITLNGTIVLSKFCVTSTYFPT* 13184
Range 8: 12746 to 13594 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
609.1 bits(1323) | 0.0 | 278/283(98%) | 0/283(0%) | Minus/Plus |
Query 155 FRRGSMWT*RRI*KVRSCR*ELWK*RRGEXXXXXXXXXXXLHT*IFIRTCRSCCQMK*LRPEPIQFRPTLLTLWLS*LRCCP*QPVSSG*ETC*DIC*YEDDRQIFPTT*E*LGYMT*SLRSSWS*NRFSTRTHPGVLKT*NHMCL*SPSTPFTSFHPISLG*VMR*RQVKGERYARRSPRSWCAV*WRKIIG*D*PQWRP**LC*FTTPFTAQTLPGLNDAQISSM*G*EEKSRKFRYGG*KIAPIEYQKSAG*TLNVYCVGTIVISHVWLGDITAFAETIG 1003 FR GSMWT*RRI*KVRSCR*ELWK*RRGEYRRTLLYRRWYLHT*IFIRTCRSCCQMK*LRPEPIQFRPTLL LWLS*LRCCP*QPVSSG*ETC*DIC*YEDDRQIFPTT*E*LGYMT*SLRSSWS*NRFSTRTHPGVLKT*NHMCL*SPSTPFTSFHPISLG*VMR*RQVKGERYARRSPRSWCAV*WRKIIG*D*PQWRP**LC*FTTPFTAQTLPGLNDAQISSM*G*+EKSRKFRYGG*KIAPIEYQKSAG*TLNVYCVGTIVISH+WLGD TAFAETIG Subject 12746 FRWGSMWT*RRI*KVRSCR*ELWK*RRGEYRRTLLYRRWYLHT*IFIRTCRSCCQMK*LRPEPIQFRPTLLALWLS*LRCCP*QPVSSG*ETC*DIC*YEDDRQIFPTT*E*LGYMT*SLRSSWS*NRFSTRTHPGVLKT*NHMCL*SPSTPFTSFHPISLG*VMR*RQVKGERYARRSPRSWCAV*WRKIIG*D*PQWRP**LC*FTTPFTAQTLPGLNDAQISSM*G*KEKSRKFRYGG*KIAPIEYQKSAG*TLNVYCVGTIVISHIWLGDTTAFAETIG 13594
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 9
Range 1: 12739 to 13746 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
745.7 bits(1621) | 0.0 | 310/336(92%) | 0/336(0%) | Minus/Plus |
Query 3 LGIQEGKYVDVTQNLESTIVPLRVMEIKKRRVSAHVALPKVVSAYVDLYTNLQELLSDEVTKARTDTVSAYAADSMAFLVKMLPLTAREQWLRDMLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIKSFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYRLRLTPVAALIIMLIYYSVYGTNATRIKRRPDFLNVRIRGKVEKVSLRGVEDRAYRISEKRGINAQRILCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRSMINHADHASIIHYIKTNENQVTGTTLP 1010 + +Q GKYVDVTQNLESTIVPL+VMEIKKRR SAHV+LPKVVSAYVD YTNLQELLSDEVT+ARTDTVSAYA DSMAFLVKMLPLTAREQWL+D+LGYLLVRRRPANFSYDIRVAWVYDVIATLKLVI+ FFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENY+LRLTPV ALII+L+YYS+YGTNATRIKRRPDFLNVRI+G+VEKVSLRGVEDRA+RISEKRGINAQR+LCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVR+ IN ADHASIIHYIKTNENQVTGTTLP Subject 12739 VSVQVGKYVDVTQNLESTIVPLKVMEIKKRRGSAHVSLPKVVSAYVDFYTNLQELLSDEVTRARTDTVSAYATDSMAFLVKMLPLTAREQWLKDVLGYLLVRRRPANFSYDIRVAWVYDVIATLKLVIRLFFNKDTPGGIKDLKPYVPIESFDPFHELSSYFSRLSYEMTTGKGGKICPEIAEKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGRVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNENQVTGTTLP 13746
Range 2: 12747 to 13748 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
638.4 bits(1387) | 0.0 | 284/334(85%) | 0/334(0%) | Minus/Plus |
Query 1 SGGEVCGRNAEFRKYDRAVKSYGNKEEASIGARCFTEGGICIRRSLYELAGVAVR*SN*GQNRYSFGLRC*LYGFLS*DVAPDSP*AVVERHVRISASTKTTGKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTICAYRVLRPLSRAFILFL*VEL*DDDR*RGKDMPGDRREVGAPSNGGKL*VKINPSGGLNNYADLLLRLRHKRYQD*TTPRFPQCEDKRKSRESFVTGGRRSRL*NIRKARDKRSTYIV*VL**SHMSG*ATLRHSQKQLEDAELCRWYVGV*HG*LYNF*GEKYDQPCRSR*HYTLY*DERKPGYRDYSTT 1002 SG EVCGRNAEFRKYDRAVKSYGNKE+ I FTEGGI +RR LYELAG+AV *SN*GQNRYSFG+R LYGFLS*DV PD *AVV+R RISAST+TT KFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKT+CAYRV+RPLSRAF+LFL*V+L DDDR*RGKDMPGDRREVGAPSNGGKL*VKI+PS GLNNY +LL LRHKRYQD* TP FPQCEDK KSRE FVTGGRRS L*NIRKARDKRST I+*VL* SHMSG*ATLRHSQ+QLEDAELCR YV V*HG*LYNF*GEKYDQ RSR*HYTLY DERKPGYR+YSTT Subject 12747 SGREVCGRNAEFRKYDRAVKSYGNKEKTRISTC*FTEGGIRLRRFLYELAGIAVG*SN*GQNRYSFGIRYRLYGFLS*DVTPDCS*AVVKRRARISASTETTSKFFLRHKSSLGI*RDRYAQAGHKIVFQQGHTRGY*RLKTVCAYRVIRPLSRAFVLFL*VKLRDDDR*RGKDMPGDRREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRRYVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERKPGYRNYSTT 13748
Range 3: 13227 to 13748 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
347.5 bits(752) | 0.0 | 162/174(93%) | 0/174(0%) | Plus/Minus |
Query 1 CGRVVPVTWFSFVLI*CIMLA*SAWLIILLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNIR*AFIPRFSDIL*ARSSTPRNETFSTFPLILTLRKSGRRLILVAFVP*TE**ISIIIKAATGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVIS*LNL 522 CGRVVPVTWFSFVLI*CIMLA*SA LI+ LTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHN R*AFIPRFSDIL ARSSTPRNETFST P ILTLRKSGR LILVAFVP* E* SIIIKA TGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVIS*LNL Subject 13227 CGRVVPVTWFSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTLPFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVIS*LNL 13748
Range 4: 12747 to 13184 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
299.8 bits(648) | 0.0 | 133/146(91%) | 0/146(0%) | Plus/Minus |
Query 565 IGTYGFKSLIPPGVSLLKNDFMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPNMSLNHCSRAVRGNILTKKAIESAA*AETVSVLALVTSSDSNSCKFV*RSTYADTTFGKATCADTRLFFISITLNGTIVLSKFCVTSTYFPS* 1002 IGTYGFKSLIPPGVSLLKN+ MTSLSVAITSYTQATLMS*EKFAGRLRTSRYP+ S NHCSRAVRGNILTKKAIES A AETVSVLALVTSSDSNSCKFV*+ST ADTTFGK TCAD RLFFISIT NGTIVLSKFCVTSTYFP+* Subject 12747 IGTYGFKSLIPPGVSLLKNNLMTSLSVAITSYTQATLMS*EKFAGRLRTSRYPSTSFNHCSRAVRGNILTKKAIESVAYAETVSVLALVTSSDSNSCKFV*KST*ADTTFGKLTCADPRLFFISITFNGTIVLSKFCVTSTYFPT* 13184
Range 5: 12746 to 13747 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
607.3 bits(1319) | 0.0 | 283/334(85%) | 0/334(0%) | Plus/Minus |
Query 2 VVE*SR*PGFRSS*YSV*C*RDLHG*SYFSP*KLYNQPCHTPTYHLHNSASSNCFCECRNVA*PDM*DHYSTYTIYVERLSRAFLIFYRRDLLPPVTKLSRLFLLSSH*GNLGVV*SW*RLCRKRSSKSA*LLRPPLGLILTYNFPPLDGAPTSRRSPGISFPLYLSSSHNST*RNRMKARERGRRTL*AHMVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLPVVFVLADILTCLSTTAHGLSGATS*LRKP*SQQRRPKLYRFWP*LLHLTATPASSYKDLRMQIPPSVKQRAPILASSLFP*LLTARSYFLNSALRPHTSPPE 1003 VVE* R*PGFRSS*YSV*C*RDL *SYFSP*KLYNQPCHT TY LHNSASSNC CECRNVA*PDM*D YSTY I+VERLSRAFLIF R DLLPPVTK SRLF LSSH*GN GV *SW*RLCRK SS *LLRP LG ILTY+FPPLDGAPTSRRSPGISFPLYLSSS N T*RNR KARERGR TL*AH VLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNL VV VLADIL L TTAH SG TS*LRKP*S+ R PKLYRFWP*LLH TA PASSYK+LR +IPPSV IL SLFP*LLTARSYFLNSALRPHTS PE Subject 12746 VVE*FR*PGFRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTYRLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTSRRSPGISFPLYLSSSRNLT*RNRTKARERGRMTL*AHTVLSL*YPRVCPC*KTIL*PA*A*RSRHIPKLLLCRRKNLLVVSVLADILARLLTTAHEQSGVTS*LRKP*SR*RMPKLYRFWP*LLHPTAIPASSYKNLRKRIPPSVN*HVLILVFSLFP*LLTARSYFLNSALRPHTSLPE 13747
Range 6: 13054 to 13746 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
465.7 bits(1010) | 0.0 | 202/231(87%) | 0/231(0%) | Plus/Minus |
Query 3 W*SSPGNLVFVRLNIVYNASVICMVDHTSHLRSYTISRVIRQRTIYITQRLPIVSANAVMSPSQTCEITIVPTQYTLSVYPALF*YSIGAIFYPP*RNFLDFSSYPHIEEIWASFNPGSVCAVNGVVNQHNY*GRHWG*S*PIIFLH*TAHQLLGDLRAYLSPFTCRHLITQPREIG*KLVKGVEGLYRHIWF*VFNTPGCVLVEKRFYDQLERSDHVIYPSYSYVVGKIC 695 W*SS GNLVFVRL+IVYNASVIC VD SHLRSYTISRVIR RT+YITQRLPIV ANAVMSPSQTCEI IVPT YTLSVYPALF*YS G IFYPP*RN LD S YPHIEEI ASFNPGSVCAVNGVV Q+NY*G HWG S* I+FLH*TAHQLLGDLRAYLSPFTCRHL+T PREIG KLVKGVE LYRHI F*VFNTPGCVLVEK+ YDQLERSDHVIYPSYSYVVGKIC Subject 13054 W*SSSGNLVFVRLDIVYNASVICGVDRISHLRSYTISRVIR*RTVYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLDSSLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLLGDLRAYLSPFTCRHLVT*PREIGRKLVKGVE*LYRHIRF*VFNTPGCVLVEKQSYDQLERSDHVIYPSYSYVVGKIC 13746
Range 7: 12745 to 13011 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
153.2 bits(328) | 0.0 | 70/89(79%) | 0/89(0%) | Plus/Minus |
Query 738 PLLTGCQGQHLN*ESHRVSSVGRNCIGSGLSYFI*QQLLQVRIKIYVCRYHLR*SNVRRYSPLLYFHNS*RHDRTF*ILRYVHILPLLN 1004 PLLT QG HLN*ESHRV SV RNCIGSG SYFI QQ LQVRIKIYV YHLR*+N+ S LYFHN *RHDRTF*ILRYVHILP LN Subject 12745 PLLTSSQG*HLN*ESHRVGSVCRNCIGSGPSYFIRQQFLQVRIKIYVSGYHLR*TNMC*SSSFLYFHNF*RHDRTF*ILRYVHILPYLN 13011
Range 8: 12746 to 13594 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
503.3 bits(1092) | 0.0 | 238/283(84%) | 0/283(0%) | Minus/Plus |
Query 155 FRRGSMWT*RRI*KVRSCR*ELWK*RRGEXXXXXXXXXXXLHT*IFIRTCRSCCQMK*LRPEPIQFRPTLLTLWLS*LRCCP*QPVSSG*ETC*DIC*YEDDRQIFPTT*E*LGYMT*SLRSSWS*NRFSTRTHPGVLKT*NHMCL*SPSTPFTSFHPISLG*VMR*RQVKGERYARRSPRSWCAV*WRKIIG*D*PQWRP**LC*FTTPFTAQTLPGLNDAQISSM*G*EEKSRKFRYGG*KIAPIEYQKSAG*TLNVYCVGTIVISHVWLGDITAFAETIG 1003 FR GSMWT*RRI*KVRSCR*+LWK*R+ E + L+YRRWY T*IFIRTCR+CC+MK*L PEPIQFR TL TLWLS*LRC P* VSSG*+TC*DIC*Y DD+QIFPTT*E*LGYMT*SLRSSWS*+ FSTRTHPGVLKT*N MCL*S STPFTSF PISLG*V R*RQVKGERYARRSPRSWCAV*WRK I *D*PQ P**L +TTPFTAQTLPGL DA+ISSM*G* E+SR+FRYGG*KI P+EYQKSAG*TLNVY VGTI ISHVWLGDITAFA TIG Subject 12746 FR*GSMWT*RRI*KVRSCR*KLWK*RKDEDQHMLVYRRWYPLT*IFIRTCRNCCRMK*LGPEPIQFRHTLPTLWLS*LRCYP*LLVSSG*KTC*DIC*YGDDQQIFPTT*E*LGYMT*SLRSSWS*DCFSTRTHPGVLKT*NRMCL*SHSTPFTSFRPISLG*VTR*RQVKGERYARRSPRSWCAV*WRKTIS*D*PQ*WP**LYWYTTPFTAQTLPGLKDARISSM*G*REESRRFRYGG*KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIG 13594
Nucleotide Sequence (425 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
331.0 | 1682.2 | 27% | 5.122e-89 | 96% | GQ352632.1 | |
331.0 | 1682.2 | 27% | 5.122e-89 | 96% | KX756668.1 | |
327.3 | 1660.7 | 27% | 6.5e-88 | 93% | KJ174518.1 | |
325.0 | 1663.0 | 27% | 3.181e-87 | 96% | KX701860.1 | |
319.5 | 1646.5 | 27% | 1.438e-85 | 96% | EU259806.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 623, complete genome
Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 10
Range 1: 10845 to 11267 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
331.0 bits(716) | 0.0 | 140/141(99%) | 0/141(0%) | Plus/Minus |
Query 1 SSPKVENR***VFYSRLS*GIEGCGCRFVNNTSNRYTKTFQCLNNEASFKGVIISRYRYNCGCNRSRRIPFALQYQGSQE*THHVNDPQ*GVRSGT*TSD**GASAVYLYGVCGF*FLNVTFDVIPRHTYPPFRVNIQPSL 423 SSPKVENR***VFYSRLS*GIEGCGCRFVNNTSNRYTKTFQCLNNEASFKGVIISRYRYNCGCNRSRRIPFALQYQGSQE*T+HVNDPQ*GVRSGT*TSD**GASAVYLYGVCGF*FLNVTFDVIPRHTYPPFRVNIQPSL Subject 10845 SSPKVENR***VFYSRLS*GIEGCGCRFVNNTSNRYTKTFQCLNNEASFKGVIISRYRYNCGCNRSRRIPFALQYQGSQE*TYHVNDPQ*GVRSGT*TSD**GASAVYLYGVCGF*FLNVTFDVIPRHTYPPFRVNIQPSL 11267
Range 2: 10988 to 11266 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
215.1 bits(463) | 0.0 | 92/93(99%) | 0/93(0%) | Minus/Plus |
Query 2 TGHLIEGR*RDVFILESLDTGVRKVYVYYGYSRSCNGTG*L*LL*TKLRC*GTERSWYTG*RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR 280 TGHLIEGR*RD+FILESLDTGVRKVYVYYGYSRSCNGTG*L*LL*TKLRC*GTERSWYTG*RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR Subject 10988 TGHLIEGR*RDMFILESLDTGVRKVYVYYGYSRSCNGTG*L*LL*TKLRC*GTERSWYTG*RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR 11266
Range 3: 10844 to 10936 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
74.8 bits(157) | 0.0 | 31/31(100%) | 0/31(0%) | Minus/Plus |
Query 332 RGKVVC*PEKVGRCDEG*RRTLR*EIKTHIH 424 RGKVVC*PEKVGRCDEG*RRTLR*EIKTHIH Subject 10844 RGKVVC*PEKVGRCDEG*RRTLR*EIKTHIH 10936
Range 4: 10845 to 11267 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
267.7 bits(578) | 0.0 | 140/141(99%) | 0/141(0%) | Minus/Plus |
Query 1 EGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDXXXXXXXXXXXXGPDTLLRVVDVMCLFLRALILECERYTSXXXXXXXXXVPADYNSFKRSFVVEALKGLGIPVRGVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG 423 EGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDV+CLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG Subject 10845 EGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG 11267
Range 5: 10844 to 11266 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
260.0 bits(561) | 0.0 | 141/141(100%) | 0/141(0%) | Plus/Minus |
Query 2 PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTPLTGIPRPFSASTTKLRLKEL*SAGXXXXXXXXXXDVYLSHSSIKALKNKHITSTTLNKVSGXXXXXXXXXXXXLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPS 424 PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPS Subject 10844 PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPS 11266
Range 6: 10843 to 11064 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
158.7 bits(340) | 0.0 | 73/74(99%) | 0/74(0%) | Minus/Plus |
Query 204 *REGCMLTRKGG*V*RGITSNVTLRN*NPHTP*R*TAEAPY*SEV*VPDRTPY*GSLT*CVYS*EP*YWSAKGI 425 *REGCMLTRKGG*V*RGITSNVTLRN*NPHTP*R*TAEAPY*SEV*VPDRTPY*GSLT* VYS*EP*YWSAKGI Subject 10843 *REGCMLTRKGG*V*RGITSNVTLRN*NPHTP*R*TAEAPY*SEV*VPDRTPY*GSLT*YVYS*EP*YWSAKGI 11064
Range 7: 11107 to 11265 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
117.5 bits(250) | 0.0 | 53/53(100%) | 0/53(0%) | Minus/Plus |
Query 3 IITPLNEASLLRH*KVLVYRLEVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGE 161 IITPLNEASLLRH*KVLVYRLEVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGE Subject 11107 IITPLNEASLLRH*KVLVYRLEVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGE 11265
Range 8: 11107 to 11265 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
116.5 bits(248) | 0.0 | 53/53(100%) | 0/53(0%) | Plus/Minus |
Query 3 LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL*PVYQDLSVPQQRSFV*RSYN 161 LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL*PVYQDLSVPQQRSFV*RSYN Subject 11107 LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL*PVYQDLSVPQQRSFV*RSYN 11265
Grapevine leafroll associated virus 3 isolate TC BR, complete genome
Sequence ID: KX756668.1 Length: 18498 Number of Matches: 10
Range 1: 10845 to 11267 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
331.0 bits(716) | 0.0 | 140/141(99%) | 0/141(0%) | Plus/Minus |
Query 1 SSPKVENR***VFYSRLS*GIEGCGCRFVNNTSNRYTKTFQCLNNEASFKGVIISRYRYNCGCNRSRRIPFALQYQGSQE*THHVNDPQ*GVRSGT*TSD**GASAVYLYGVCGF*FLNVTFDVIPRHTYPPFRVNIQPSL 423 SSPKVENR***VFYSRLS*GIEGCGCRFVNNTSNRYTKTFQCLNNEASFKGVIISRYRYNCGCNRSRRIPFALQYQGSQE*T+HVNDPQ*GVRSGT*TSD**GASAVYLYGVCGF*FLNVTFDVIPRHTYPPFRVNIQPSL Subject 10845 SSPKVENR***VFYSRLS*GIEGCGCRFVNNTSNRYTKTFQCLNNEASFKGVIISRYRYNCGCNRSRRIPFALQYQGSQE*TYHVNDPQ*GVRSGT*TSD**GASAVYLYGVCGF*FLNVTFDVIPRHTYPPFRVNIQPSL 11267
Range 2: 10988 to 11266 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
215.1 bits(463) | 0.0 | 92/93(99%) | 0/93(0%) | Minus/Plus |
Query 2 TGHLIEGR*RDVFILESLDTGVRKVYVYYGYSRSCNGTG*L*LL*TKLRC*GTERSWYTG*RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR 280 TGHLIEGR*RD+FILESLDTGVRKVYVYYGYSRSCNGTG*L*LL*TKLRC*GTERSWYTG*RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR Subject 10988 TGHLIEGR*RDMFILESLDTGVRKVYVYYGYSRSCNGTG*L*LL*TKLRC*GTERSWYTG*RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR 11266
Range 3: 10844 to 10936 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
74.8 bits(157) | 0.0 | 31/31(100%) | 0/31(0%) | Minus/Plus |
Query 332 RGKVVC*PEKVGRCDEG*RRTLR*EIKTHIH 424 RGKVVC*PEKVGRCDEG*RRTLR*EIKTHIH Subject 10844 RGKVVC*PEKVGRCDEG*RRTLR*EIKTHIH 10936
Range 4: 10845 to 11267 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
267.7 bits(578) | 0.0 | 140/141(99%) | 0/141(0%) | Minus/Plus |
Query 1 EGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDXXXXXXXXXXXXGPDTLLRVVDVMCLFLRALILECERYTSXXXXXXXXXVPADYNSFKRSFVVEALKGLGIPVRGVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG 423 EGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDV+CLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG Subject 10845 EGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG 11267
Range 5: 10844 to 11266 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
260.0 bits(561) | 0.0 | 141/141(100%) | 0/141(0%) | Plus/Minus |
Query 2 PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTPLTGIPRPFSASTTKLRLKEL*SAGXXXXXXXXXXDVYLSHSSIKALKNKHITSTTLNKVSGXXXXXXXXXXXXLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPS 424 PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPS Subject 10844 PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPS 11266
Range 6: 10843 to 11064 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
158.7 bits(340) | 0.0 | 73/74(99%) | 0/74(0%) | Minus/Plus |
Query 204 *REGCMLTRKGG*V*RGITSNVTLRN*NPHTP*R*TAEAPY*SEV*VPDRTPY*GSLT*CVYS*EP*YWSAKGI 425 *REGCMLTRKGG*V*RGITSNVTLRN*NPHTP*R*TAEAPY*SEV*VPDRTPY*GSLT* VYS*EP*YWSAKGI Subject 10843 *REGCMLTRKGG*V*RGITSNVTLRN*NPHTP*R*TAEAPY*SEV*VPDRTPY*GSLT*YVYS*EP*YWSAKGI 11064
Range 7: 11107 to 11265 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
117.5 bits(250) | 0.0 | 53/53(100%) | 0/53(0%) | Minus/Plus |
Query 3 IITPLNEASLLRH*KVLVYRLEVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGE 161 IITPLNEASLLRH*KVLVYRLEVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGE Subject 11107 IITPLNEASLLRH*KVLVYRLEVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGE 11265
Range 8: 11107 to 11265 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
116.5 bits(248) | 0.0 | 53/53(100%) | 0/53(0%) | Plus/Minus |
Query 3 LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL*PVYQDLSVPQQRSFV*RSYN 161 LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL*PVYQDLSVPQQRSFV*RSYN Subject 11107 LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL*PVYQDLSVPQQRSFV*RSYN 11265
Grapevine leafroll associated virus 3, complete genome
Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 10
Range 1: 10848 to 11267 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
327.3 bits(708) | 0.0 | 138/140(99%) | 0/140(0%) | Plus/Minus |
Query 1 SSPKVENR***VFYSRLS*GIEGCGCRFVNNTSNRYTKTFQCLNNEASFKGVIISRYRYNCGCNRSRRIPFALQYQGSQE*THHVNDPQ*GVRSGT*TSD**GASAVYLYGVCGF*FLNVTFDVIPRHTYPPFRVNIQPS 420 SSPKVENR***VFYSRLS*GIEGCGCRFVNNTSNRYTKTFQCLNNEASFKGVIISRYRYNCGCNRSRRIPF LQYQGSQE*T+HVNDPQ*GVRSGT*TSD**GASAVYLYGVCGF*FLNVTFDVIPRHTYPPFRVNIQPS Subject 10848 SSPKVENR***VFYSRLS*GIEGCGCRFVNNTSNRYTKTFQCLNNEASFKGVIISRYRYNCGCNRSRRIPFTLQYQGSQE*TYHVNDPQ*GVRSGT*TSD**GASAVYLYGVCGF*FLNVTFDVIPRHTYPPFRVNIQPS 11267
Range 2: 10845 to 11267 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
267.7 bits(578) | 0.0 | 140/141(99%) | 0/141(0%) | Minus/Plus |
Query 1 EGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDXXXXXXXXXXXXGPDTLLRVVDVMCLFLRALILECERYTSXXXXXXXXXVPADYNSFKRSFVVEALKGLGIPVRGVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG 423 EGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDV+CLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG Subject 10845 EGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG 11267
Range 3: 10988 to 11266 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
210.9 bits(454) | 0.0 | 91/93(98%) | 0/93(0%) | Minus/Plus |
Query 2 TGHLIEGR*RDVFILESLDTGVRKVYVYYGYSRSCNGTG*L*LL*TKLRC*GTERSWYTG*RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR 280 TGHLIEGR*RD+FILESLDTGV KVYVYYGYSRSCNGTG*L*LL*TKLRC*GTERSWYTG*RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR Subject 10988 TGHLIEGR*RDMFILESLDTGV*KVYVYYGYSRSCNGTG*L*LL*TKLRC*GTERSWYTG*RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR 11266
Range 4: 10844 to 10936 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
71.2 bits(149) | 0.0 | 30/31(97%) | 0/31(0%) | Minus/Plus |
Query 332 RGKVVC*PEKVGRCDEG*RRTLR*EIKTHIH 424 R KVVC*PEKVGRCDEG*RRTLR*EIKTHIH Subject 10844 RRKVVC*PEKVGRCDEG*RRTLR*EIKTHIH 10936
Range 5: 10844 to 11266 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
260.0 bits(561) | 0.0 | 141/141(100%) | 0/141(0%) | Plus/Minus |
Query 2 PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTPLTGIPRPFSASTTKLRLKEL*SAGXXXXXXXXXXDVYLSHSSIKALKNKHITSTTLNKVSGXXXXXXXXXXXXLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPS 424 PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPS Subject 10844 PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPS 11266
Range 6: 10843 to 11064 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
155.5 bits(333) | 0.0 | 71/74(96%) | 0/74(0%) | Minus/Plus |
Query 204 *REGCMLTRKGG*V*RGITSNVTLRN*NPHTP*R*TAEAPY*SEV*VPDRTPY*GSLT*CVYS*EP*YWSAKGI 425 *+EGCMLTRKGG*V*RGITSNVTLRN*NPHTP*R*TAEAPY*SEV*VPDRTPY*GSLT* VYS*EP*YWS KGI Subject 10843 *KEGCMLTRKGG*V*RGITSNVTLRN*NPHTP*R*TAEAPY*SEV*VPDRTPY*GSLT*YVYS*EP*YWSVKGI 11064
Range 7: 11107 to 11265 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
117.5 bits(250) | 0.0 | 53/53(100%) | 0/53(0%) | Minus/Plus |
Query 3 IITPLNEASLLRH*KVLVYRLEVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGE 161 IITPLNEASLLRH*KVLVYRLEVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGE Subject 11107 IITPLNEASLLRH*KVLVYRLEVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGE 11265
Range 8: 11107 to 11265 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
116.5 bits(248) | 0.0 | 53/53(100%) | 0/53(0%) | Plus/Minus |
Query 3 LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL*PVYQDLSVPQQRSFV*RSYN 161 LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL*PVYQDLSVPQQRSFV*RSYN Subject 11107 LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL*PVYQDLSVPQQRSFV*RSYN 11265
Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome
Sequence ID: KX701860.1 Length: 18020 Number of Matches: 10
Range 1: 10363 to 10785 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
325.0 bits(703) | 0.0 | 138/141(98%) | 0/141(0%) | Plus/Minus |
Query 1 SSPKVENR***VFYSRLS*GIEGCGCRFVNNTSNRYTKTFQCLNNEASFKGVIISRYRYNCGCNRSRRIPFALQYQGSQE*THHVNDPQ*GVRSGT*TSD**GASAVYLYGVCGF*FLNVTFDVIPRHTYPPFRVNIQPSL 423 SSPKVENR***VFYSRLS*GIEGCGCRFVNNTSNRYTKTFQCLNNEASFKGVIISRYRY+CGCNRSRRIPFALQYQGSQE*T+HVNDPQ*GVRSGT*TSD**GASAVYLYGVCGF*FLNVT DVIPRHTYPPFRVNIQPSL Subject 10363 SSPKVENR***VFYSRLS*GIEGCGCRFVNNTSNRYTKTFQCLNNEASFKGVIISRYRYDCGCNRSRRIPFALQYQGSQE*TYHVNDPQ*GVRSGT*TSD**GASAVYLYGVCGF*FLNVTSDVIPRHTYPPFRVNIQPSL 10785
Range 2: 10363 to 10785 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
264.5 bits(571) | 0.0 | 139/141(99%) | 0/141(0%) | Minus/Plus |
Query 1 EGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDXXXXXXXXXXXXGPDTLLRVVDVMCLFLRALILECERYTSXXXXXXXXXVPADYNSFKRSFVVEALKGLGIPVRGVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG 423 EGRLYVNPKRWVGVTRDNV RYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDV+CLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG Subject 10363 EGRLYVNPKRWVGVTRDNVGRYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG 10785
Range 3: 10506 to 10784 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
209.6 bits(451) | 0.0 | 91/93(98%) | 0/93(0%) | Minus/Plus |
Query 2 TGHLIEGR*RDVFILESLDTGVRKVYVYYGYSRSCNGTG*L*LL*TKLRC*GTERSWYTG*RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR 280 TGHLIEGR*RD+FILESLDTGVRKVYVYYGYSRS NGTG*L*LL*TKLRC*GTERSWYTG*RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR Subject 10506 TGHLIEGR*RDMFILESLDTGVRKVYVYYGYSRSRNGTG*L*LL*TKLRC*GTERSWYTG*RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR 10784
Range 4: 10362 to 10454 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
74.8 bits(157) | 0.0 | 31/31(100%) | 0/31(0%) | Minus/Plus |
Query 332 RGKVVC*PEKVGRCDEG*RRTLR*EIKTHIH 424 RGKVVC*PEKVGRCDEG*RRTLR*EIKTHIH Subject 10362 RGKVVC*PEKVGRCDEG*RRTLR*EIKTHIH 10454
Range 5: 10362 to 10784 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
257.7 bits(556) | 0.0 | 140/141(99%) | 0/141(0%) | Plus/Minus |
Query 2 PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTPLTGIPRPFSASTTKLRLKEL*SAGXXXXXXXXXXDVYLSHSSIKALKNKHITSTTLNKVSGXXXXXXXXXXXXLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPS 424 PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*R TLSLVTPTHLFGLTYNLPS Subject 10362 PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RPTLSLVTPTHLFGLTYNLPS 10784
Range 6: 10361 to 10582 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
156.4 bits(335) | 0.0 | 72/74(97%) | 0/74(0%) | Minus/Plus |
Query 204 *REGCMLTRKGG*V*RGITSNVTLRN*NPHTP*R*TAEAPY*SEV*VPDRTPY*GSLT*CVYS*EP*YWSAKGI 425 *REGCMLTRKGG*V*RGITS+VTLRN*NPHTP*R*TAEAPY*SEV*VPDRTPY*GSLT* VYS*EP*YWSAKGI Subject 10361 *REGCMLTRKGG*V*RGITSDVTLRN*NPHTP*R*TAEAPY*SEV*VPDRTPY*GSLT*YVYS*EP*YWSAKGI 10582
Range 7: 10625 to 10783 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
117.5 bits(250) | 0.0 | 53/53(100%) | 0/53(0%) | Minus/Plus |
Query 3 IITPLNEASLLRH*KVLVYRLEVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGE 161 IITPLNEASLLRH*KVLVYRLEVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGE Subject 10625 IITPLNEASLLRH*KVLVYRLEVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGE 10783
Range 8: 10625 to 10783 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
116.5 bits(248) | 0.0 | 53/53(100%) | 0/53(0%) | Plus/Minus |
Query 3 LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL*PVYQDLSVPQQRSFV*RSYN 161 LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL*PVYQDLSVPQQRSFV*RSYN Subject 10625 LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL*PVYQDLSVPQQRSFV*RSYN 10783
Grapevine leafroll associated virus 3 isolate GP18, complete genome
Sequence ID: EU259806.1 Length: 18498 Number of Matches: 10
Range 1: 10845 to 11267 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
319.5 bits(691) | 0.0 | 137/141(97%) | 0/141(0%) | Plus/Minus |
Query 1 SSPKVENR***VFYSRLS*GIEGCGCRFVNNTSNRYTKTFQCLNNEASFKGVIISRYRYNCGCNRSRRIPFALQYQGSQE*THHVNDPQ*GVRSGT*TSD**GASAVYLYGVCGF*FLNVTFDVIPRHTYPPFRVNIQPSL 423 SSPKVENR***VFYSRLS*GIEGCGCRFVNNTSNRYTKTFQ LNNEASFKGVIISRYRYNC CNRSRRIPFALQYQGSQE*T+HVNDPQ*GVRSGT*TSD**GASAVYLYGVC F*FLNVTFDVIPRHTYPPFRVNIQPSL Subject 10845 SSPKVENR***VFYSRLS*GIEGCGCRFVNNTSNRYTKTFQYLNNEASFKGVIISRYRYNCSCNRSRRIPFALQYQGSQE*TYHVNDPQ*GVRSGT*TSD**GASAVYLYGVCRF*FLNVTFDVIPRHTYPPFRVNIQPSL 11267
Range 2: 10845 to 11267 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
265.9 bits(574) | 0.0 | 139/141(99%) | 0/141(0%) | Minus/Plus |
Query 1 EGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDXXXXXXXXXXXXGPDTLLRVVDVMCLFLRALILECERYTSXXXXXXXXXVPADYNSFKRSFVVEALKGLGIPVRGVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG 423 EGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDV+CLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVE LKGLGIPVRGVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG Subject 10845 EGRLYVNPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEVLKGLGIPVRGVVNEPTAAALYSLAKSRVEDLLLAVFDFGGG 11267
Range 3: 10988 to 11266 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
211.4 bits(455) | 0.0 | 91/93(98%) | 0/93(0%) | Minus/Plus |
Query 2 TGHLIEGR*RDVFILESLDTGVRKVYVYYGYSRSCNGTG*L*LL*TKLRC*GTERSWYTG*RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR 280 TGHLIEGR*RD+FILESLDTGVRKVYVYYGYS SCNGTG*L*LL*TKLRC*GTERSWYTG*RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR Subject 10988 TGHLIEGR*RDMFILESLDTGVRKVYVYYGYSCSCNGTG*L*LL*TKLRC*GTERSWYTG*RCC*RTDSRSPLFLS*VASRRPIISGFRLWGR 11266
Range 4: 10844 to 10936 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
72.1 bits(151) | 0.0 | 30/31(97%) | 0/31(0%) | Minus/Plus |
Query 332 RGKVVC*PEKVGRCDEG*RRTLR*EIKTHIH 424 RGKVVC*PEKVGRCDEG*RRTLR*EIKT+IH Subject 10844 RGKVVC*PEKVGRCDEG*RRTLR*EIKTYIH 10936
Range 5: 10844 to 11266 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
258.1 bits(557) | 0.0 | 140/141(99%) | 0/141(0%) | Plus/Minus |
Query 2 PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTPLTGIPRPFSASTTKLRLKEL*SAGXXXXXXXXXXDVYLSHSSIKALKNKHITSTTLNKVSGXXXXXXXXXXXXLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPS 424 PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTPLTGIPRPFS STTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPS Subject 10844 PPPKSKTANNRSSTRDLAKE*RAAAVGSLTTPLTGIPRPFSTSTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFGLTYNLPS 11266
Range 6: 10843 to 11064 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
154.1 bits(330) | 0.0 | 72/74(97%) | 0/74(0%) | Minus/Plus |
Query 204 *REGCMLTRKGG*V*RGITSNVTLRN*NPHTP*R*TAEAPY*SEV*VPDRTPY*GSLT*CVYS*EP*YWSAKGI 425 *REGCMLTRKGG*V*RGITSNVTLRN*N HTP*R*TAEAPY*SEV*VPDRTPY*GSLT* VYS*EP*YWSAKGI Subject 10843 *REGCMLTRKGG*V*RGITSNVTLRN*NLHTP*R*TAEAPY*SEV*VPDRTPY*GSLT*YVYS*EP*YWSAKGI 11064
Range 7: 11107 to 11265 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
114.7 bits(244) | 0.0 | 52/53(98%) | 0/53(0%) | Minus/Plus |
Query 3 IITPLNEASLLRH*KVLVYRLEVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGE 161 IITPLNEASLLR+*KVLVYRLEVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGE Subject 11107 IITPLNEASLLRY*KVLVYRLEVLLTNRQPQPSIP*LSRE*KTYY*RFSTLGE 11265
Range 8: 11107 to 11265 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
116.5 bits(248) | 0.0 | 53/53(100%) | 0/53(0%) | Plus/Minus |
Query 3 LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL*PVYQDLSVPQQRSFV*RSYN 161 LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL*PVYQDLSVPQQRSFV*RSYN Subject 11107 LPQSRKPLIIGLLLAT*LRNRGLRLSVR*QHL*PVYQDLSVPQQRSFV*RSYN 11265
Nucleotide Sequence (725 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
574.7 | 3068.4 | 33% | 4.539e-162 | 98% | GU983863.1 | |
571.1 | 3064.3 | 33% | 5.76e-161 | 98% | KX756669.1 | |
569.2 | 3057.9 | 33% | 2.052e-160 | 97% | JX559645.1 | |
569.2 | 3055.2 | 33% | 2.052e-160 | 96% | GQ352631.1 | |
569.2 | 3022.6 | 33% | 2.052e-160 | 92% | EU344893.1 |
Alignments
Grapevine leafroll associated virus 3 isolate WA MR, complete genome
Sequence ID: GU983863.1 Length: 18498 Number of Matches: 11
Range 1: 2658 to 3380 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
574.7 bits(1248) | 0.0 | 238/241(99%) | 0/241(0%) | Minus/Minus |
Query 2 N*PRYFTNERFGHGYKRLQNVEIIVHHCLSVGGDYTRKTVTHGLKEELEDPGETPLTGFYKVIRANTLRPILNCLSHNGDD*TPHIIRRDIDLAVDDATPRNDMSLLRPDCPNAELECSILKRPYGVERVGIDPVDKIRIEDYRLEGHTRTSYNGYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL 724 N*PRYFTNERFGHGYKRLQNVEIIVHHCLSVGGDYTRKTVTHGLKEELEDPGETPLTGFYKVIRANTLRPILNCLSHNGDD*TPHIIRRDIDLAVDDATPRNDMSLLRPDCPN LECSILKRPYGVERVGIDPVDKIRIEDYRLEGHTRTSYN YKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL Subject 2658 N*PRYFTNERFGHGYKRLQNVEIIVHHCLSVGGDYTRKTVTHGLKEELEDPGETPLTGFYKVIRANTLRPILNCLSHNGDD*TPHIIRRDIDLAVDDATPRNDMSLLRPDCPNGVLECSILKRPYGVERVGIDPVDKIRIEDYRLEGHTRTSYNRYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL 3380
Range 2: 2658 to 3380 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
567.0 bits(1231) | 0.0 | 238/241(99%) | 0/241(0%) | Plus/Plus |
Query 2 KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEFGVGAVRSQKTHVITGSRVVHSKVDISPDDMWGLVVAVMAQAIKDRAKSIRSYNFIKASEGSLAGVFKLFFQTVGDCFSSVVSTYAKAMVHDNFNVLETLISMPKAFICKVPGSV 724 KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVR SSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFE+ VGAVRSQKTHVITGSRVVHSKVDISPDDMWGLVVAVMAQAIKDRAKSIRSYNFIKASEGSLAGVFKLFFQTVGDCFSSVVSTYAKAMVHDNFNVLETLISMPKAFICKVPGSV Subject 2658 KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRASSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAVRSQKTHVITGSRVVHSKVDISPDDMWGLVVAVMAQAIKDRAKSIRSYNFIKASEGSLAGVFKLFFQTVGDCFSSVVSTYAKAMVHDNFNVLETLISMPKAFICKVPGSV 3380
Range 3: 2657 to 3136 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
374.0 bits(810) | 0.0 | 158/160(99%) | 0/160(0%) | Plus/Plus |
Query 1 EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTRCSWF*CVLQDDSPRFGFCRQDLFLRAQHHRDV*E*NIRVRRWGSQVAKDSCHYGESRRPQQGRYLSG*YVGF 480 EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRT FIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYT CSWF*CVLQDDSPRFGFCRQDLFLRAQHHRDV*E*NIRVRRWGSQVAKDSCHYGESRRPQQGRYLSG*YVGF Subject 2657 EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTRFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTCCSWF*CVLQDDSPRFGFCRQDLFLRAQHHRDV*E*NIRVRRWGSQVAKDSCHYGESRRPQQGRYLSG*YVGF 3136
Range 4: 3188 to 3379 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.0 bits(308) | 0.0 | 64/64(100%) | 0/64(0%) | Plus/Plus |
Query 532 LL*LYKSQ*GESRRGLQALLSDRG*LFFECSLHLR*GNGAR*FQRFGDAYIHAQSVHL*STWVS 723 LL*LYKSQ*GESRRGLQALLSDRG*LFFECSLHLR*GNGAR*FQRFGDAYIHAQSVHL*STWVS Subject 3188 LL*LYKSQ*GESRRGLQALLSDRG*LFFECSLHLR*GNGAR*FQRFGDAYIHAQSVHL*STWVS 3379
Range 5: 2657 to 3136 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
359.8 bits(779) | 0.0 | 157/160(98%) | 0/160(0%) | Minus/Minus |
Query 1 KPHISSGEISTLLWTTRLPVMT*VFCDLTAPTPNSNVLFSNVPMVLSA*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF 480 KPHISSGEISTLLWTTRLPVMT*VFCDLTAPT SNVLFSNVPMVLSA*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDE RT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF Subject 2657 KPHISSGEISTLLWTTRLPVMT*VFCDLTAPTAYSNVLFSNVPMVLSA*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEART*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF 3136
Range 6: 3185 to 3379 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
142.2 bits(304) | 0.0 | 65/65(100%) | 0/65(0%) | Minus/Minus |
Query 529 TDPGTLQMNALGMDISVSKTLKLSCTIALA*VETTLEKQSPTV*KKSLKTPARLPSLAFIKL*ER 723 TDPGTLQMNALGMDISVSKTLKLSCTIALA*VETTLEKQSPTV*KKSLKTPARLPSLAFIKL*ER Subject 3185 TDPGTLQMNALGMDISVSKTLKLSCTIALA*VETTLEKQSPTV*KKSLKTPARLPSLAFIKL*ER 3379
Range 7: 2989 to 3381 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
261.3 bits(564) | 0.0 | 129/131(98%) | 0/131(0%) | Plus/Plus |
Query 333 PTRSTP*GRLRIEHSSSALGQSGRKRLMSLRGVASSTARSISLRMICGV*SSPLWLRQLRIGRRVFALITL*KXXXXXXXXXXXXXXXPWVTVFRV*SPPTLRQWCTIISTFWRRLYPCPKRSFVKYLGQL 725 PTRSTP*GRLRIEHSS+ LGQSGRKRLMSLRGVASSTARSISLRMICGV*SSPLWLRQLRIGRRVFALITL*KPVRGVSPGSSSSSFRPWVTVFRV*SPPTLRQWCTIISTFWRRLYPCPKRSFVKYLGQL Subject 2989 PTRSTP*GRLRIEHSSTPLGQSGRKRLMSLRGVASSTARSISLRMICGV*SSPLWLRQLRIGRRVFALITL*KPVRGVSPGSSSSSFRPWVTVFRV*SPPTLRQWCTIISTFWRRLYPCPKRSFVKYLGQL 3381
Range 8: 2659 to 2907 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
207.7 bits(447) | 0.0 | 83/83(100%) | 0/83(0%) | Plus/Plus |
Query 3 RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRW 251 RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRW Subject 2659 RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRW 2907
Range 9: 2779 to 3135 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
283.8 bits(613) | 0.0 | 118/119(99%) | 0/119(0%) | Minus/Minus |
Query 123 NPTYHPERYRPCCGRRDSP**HESFAT*LPQRRTRMFYSQTSLWC*ARRNRSCRQNPNRGLSS*RTH*NQLQRV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T 479 NPTYHPERYRPCCGRRDSP**HESFAT*LPQRRTRMFYSQTSLWC*ARRNRSCRQNPNRGLSS*RTH*NQLQ+V*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T Subject 2779 NPTYHPERYRPCCGRRDSP**HESFAT*LPQRRTRMFYSQTSLWC*ARRNRSCRQNPNRGLSS*RTH*NQLQQV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T 3135
Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome
Sequence ID: KX756669.1 Length: 18313 Number of Matches: 11
Range 1: 2473 to 3195 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
571.1 bits(1240) | 0.0 | 237/241(98%) | 0/241(0%) | Minus/Minus |
Query 2 N*PRYFTNERFGHGYKRLQNVEIIVHHCLSVGGDYTRKTVTHGLKEELEDPGETPLTGFYKVIRANTLRPILNCLSHNGDD*TPHIIRRDIDLAVDDATPRNDMSLLRPDCPNAELECSILKRPYGVERVGIDPVDKIRIEDYRLEGHTRTSYNGYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL 724 N*PRYFTNERFGHGYKRLQNVEIIVHHCLSVGGDYTRKTVTHGLKEELEDPGETPLTGFYKVIRANTLRPILNCLSHNGDD*TPHIIRRDIDLAVDDATPRNDMSLLRPDCPN LECSILKRPYGVERVGIDPVDKIRIEDYRLEGHTRTSYN YKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKL HVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL Subject 2473 N*PRYFTNERFGHGYKRLQNVEIIVHHCLSVGGDYTRKTVTHGLKEELEDPGETPLTGFYKVIRANTLRPILNCLSHNGDD*TPHIIRRDIDLAVDDATPRNDMSLLRPDCPNGVLECSILKRPYGVERVGIDPVDKIRIEDYRLEGHTRTSYNRYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLIHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL 3195
Range 2: 2473 to 3195 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
567.9 bits(1233) | 0.0 | 238/241(99%) | 0/241(0%) | Plus/Plus |
Query 2 KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEFGVGAVRSQKTHVITGSRVVHSKVDISPDDMWGLVVAVMAQAIKDRAKSIRSYNFIKASEGSLAGVFKLFFQTVGDCFSSVVSTYAKAMVHDNFNVLETLISMPKAFICKVPGSV 724 KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNV+KLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFE+ VGAVRSQKTHVITGSRVVHSKVDISPDDMWGLVVAVMAQAIKDRAKSIRSYNFIKASEGSLAGVFKLFFQTVGDCFSSVVSTYAKAMVHDNFNVLETLISMPKAFICKVPGSV Subject 2473 KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVYKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAVRSQKTHVITGSRVVHSKVDISPDDMWGLVVAVMAQAIKDRAKSIRSYNFIKASEGSLAGVFKLFFQTVGDCFSSVVSTYAKAMVHDNFNVLETLISMPKAFICKVPGSV 3195
Range 3: 2472 to 2951 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
377.7 bits(818) | 0.0 | 159/160(99%) | 0/160(0%) | Plus/Plus |
Query 1 EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTRCSWF*CVLQDDSPRFGFCRQDLFLRAQHHRDV*E*NIRVRRWGSQVAKDSCHYGESRRPQQGRYLSG*YVGF 480 EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYT CSWF*CVLQDDSPRFGFCRQDLFLRAQHHRDV*E*NIRVRRWGSQVAKDSCHYGESRRPQQGRYLSG*YVGF Subject 2472 EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTCCSWF*CVLQDDSPRFGFCRQDLFLRAQHHRDV*E*NIRVRRWGSQVAKDSCHYGESRRPQQGRYLSG*YVGF 2951
Range 4: 3003 to 3194 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.0 bits(308) | 0.0 | 64/64(100%) | 0/64(0%) | Plus/Plus |
Query 532 LL*LYKSQ*GESRRGLQALLSDRG*LFFECSLHLR*GNGAR*FQRFGDAYIHAQSVHL*STWVS 723 LL*LYKSQ*GESRRGLQALLSDRG*LFFECSLHLR*GNGAR*FQRFGDAYIHAQSVHL*STWVS Subject 3003 LL*LYKSQ*GESRRGLQALLSDRG*LFFECSLHLR*GNGAR*FQRFGDAYIHAQSVHL*STWVS 3194
Range 5: 2472 to 2951 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
358.0 bits(775) | 0.0 | 157/160(98%) | 0/160(0%) | Minus/Minus |
Query 1 KPHISSGEISTLLWTTRLPVMT*VFCDLTAPTPNSNVLFSNVPMVLSA*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF 480 KPHISSGEISTLLWTTRLPVMT*VFCDLTAPT SNVLFSNVPMVLSA*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSL TFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF Subject 2472 KPHISSGEISTLLWTTRLPVMT*VFCDLTAPTAYSNVLFSNVPMVLSA*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLYTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF 2951
Range 6: 3000 to 3194 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
142.2 bits(304) | 0.0 | 65/65(100%) | 0/65(0%) | Minus/Minus |
Query 529 TDPGTLQMNALGMDISVSKTLKLSCTIALA*VETTLEKQSPTV*KKSLKTPARLPSLAFIKL*ER 723 TDPGTLQMNALGMDISVSKTLKLSCTIALA*VETTLEKQSPTV*KKSLKTPARLPSLAFIKL*ER Subject 3000 TDPGTLQMNALGMDISVSKTLKLSCTIALA*VETTLEKQSPTV*KKSLKTPARLPSLAFIKL*ER 3194
Range 7: 2804 to 3196 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
261.3 bits(564) | 0.0 | 129/131(98%) | 0/131(0%) | Plus/Plus |
Query 333 PTRSTP*GRLRIEHSSSALGQSGRKRLMSLRGVASSTARSISLRMICGV*SSPLWLRQLRIGRRVFALITL*KXXXXXXXXXXXXXXXPWVTVFRV*SPPTLRQWCTIISTFWRRLYPCPKRSFVKYLGQL 725 PTRSTP*GRLRIEHSS+ LGQSGRKRLMSLRGVASSTARSISLRMICGV*SSPLWLRQLRIGRRVFALITL*KPVRGVSPGSSSSSFRPWVTVFRV*SPPTLRQWCTIISTFWRRLYPCPKRSFVKYLGQL Subject 2804 PTRSTP*GRLRIEHSSTPLGQSGRKRLMSLRGVASSTARSISLRMICGV*SSPLWLRQLRIGRRVFALITL*KPVRGVSPGSSSSSFRPWVTVFRV*SPPTLRQWCTIISTFWRRLYPCPKRSFVKYLGQL 3196
Range 8: 2474 to 2722 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
206.8 bits(445) | 0.0 | 82/83(99%) | 0/83(0%) | Plus/Plus |
Query 3 RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRW 251 RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTC+SLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRW Subject 2474 RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCISLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRW 2722
Range 9: 2594 to 2950 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
281.5 bits(608) | 0.0 | 117/119(98%) | 0/119(0%) | Minus/Minus |
Query 123 NPTYHPERYRPCCGRRDSP**HESFAT*LPQRRTRMFYSQTSLWC*ARRNRSCRQNPNRGLSS*RTH*NQLQRV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T 479 NPTYHPERYRPCCGRRDSP**HESFAT*LPQRRTRMFYSQTSLWC*ARRNRSCRQNPNRGLSS*RTH*NQLQ+V*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA T Subject 2594 NPTYHPERYRPCCGRRDSP**HESFAT*LPQRRTRMFYSQTSLWC*ARRNRSCRQNPNRGLSS*RTH*NQLQQV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQAYT 2950
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 11
Range 1: 2658 to 3380 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
569.2 bits(1236) | 0.0 | 239/241(99%) | 0/241(0%) | Plus/Plus |
Query 2 KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEFGVGAVRSQKTHVITGSRVVHSKVDISPDDMWGLVVAVMAQAIKDRAKSIRSYNFIKASEGSLAGVFKLFFQTVGDCFSSVVSTYAKAMVHDNFNVLETLISMPKAFICKVPGSV 724 KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFE+ VGAVRSQKTHVITGSRVVHSKVDISPDDMWGLVVAVMAQAIKDRAKSIRSYNFIKASEGSLAGVFKLFFQTVGDCFSSVVSTYAKAMVHDNFNVLETLISMPKAFICKVPGSV Subject 2658 KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAVRSQKTHVITGSRVVHSKVDISPDDMWGLVVAVMAQAIKDRAKSIRSYNFIKASEGSLAGVFKLFFQTVGDCFSSVVSTYAKAMVHDNFNVLETLISMPKAFICKVPGSV 3380
Range 2: 2658 to 3380 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
566.5 bits(1230) | 0.0 | 236/241(98%) | 0/241(0%) | Minus/Minus |
Query 2 N*PRYFTNERFGHGYKRLQNVEIIVHHCLSVGGDYTRKTVTHGLKEELEDPGETPLTGFYKVIRANTLRPILNCLSHNGDD*TPHIIRRDIDLAVDDATPRNDMSLLRPDCPNAELECSILKRPYGVERVGIDPVDKIRIEDYRLEGHTRTSYNGYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL 724 N*PRYFTNERFGHGYKRLQNVEIIVHHCLSVGGDYTRKTVTHGLKEELEDPGETPLTGFYKVIRANTLRPILNCLSHNGDD*TPHIIRRDIDLAVDDATPRNDMSLLRPDCPN LE SILKRPYGVERVGIDPVDKIRIEDYRLEG+TRTSYN YKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL Subject 2658 N*PRYFTNERFGHGYKRLQNVEIIVHHCLSVGGDYTRKTVTHGLKEELEDPGETPLTGFYKVIRANTLRPILNCLSHNGDD*TPHIIRRDIDLAVDDATPRNDMSLLRPDCPNGVLERSILKRPYGVERVGIDPVDKIRIEDYRLEGYTRTSYNRYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL 3380
Range 3: 2657 to 3136 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
376.8 bits(816) | 0.0 | 157/160(98%) | 0/160(0%) | Plus/Plus |
Query 1 EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTRCSWF*CVLQDDSPRFGFCRQDLFLRAQHHRDV*E*NIRVRRWGSQVAKDSCHYGESRRPQQGRYLSG*YVGF 480 EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYT CSWF*C+LQDDSPRFGFCRQDLFLRAQHHRDV*E*N+RVRRWGSQVAKDSCHYGESRRPQQGRYLSG*YVGF Subject 2657 EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTCCSWF*CILQDDSPRFGFCRQDLFLRAQHHRDV*E*NVRVRRWGSQVAKDSCHYGESRRPQQGRYLSG*YVGF 3136
Range 4: 3188 to 3379 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.0 bits(308) | 0.0 | 64/64(100%) | 0/64(0%) | Plus/Plus |
Query 532 LL*LYKSQ*GESRRGLQALLSDRG*LFFECSLHLR*GNGAR*FQRFGDAYIHAQSVHL*STWVS 723 LL*LYKSQ*GESRRGLQALLSDRG*LFFECSLHLR*GNGAR*FQRFGDAYIHAQSVHL*STWVS Subject 3188 LL*LYKSQ*GESRRGLQALLSDRG*LFFECSLHLR*GNGAR*FQRFGDAYIHAQSVHL*STWVS 3379
Range 5: 2657 to 3136 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
361.7 bits(783) | 0.0 | 158/160(99%) | 0/160(0%) | Minus/Minus |
Query 1 KPHISSGEISTLLWTTRLPVMT*VFCDLTAPTPNSNVLFSNVPMVLSA*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF 480 KPHISSGEISTLLWTTRLPVMT*VFCDLTAPT SNVLFSNVPMVLSA*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF Subject 2657 KPHISSGEISTLLWTTRLPVMT*VFCDLTAPTAYSNVLFSNVPMVLSA*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF 3136
Range 6: 3185 to 3379 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
142.2 bits(304) | 0.0 | 65/65(100%) | 0/65(0%) | Minus/Minus |
Query 529 TDPGTLQMNALGMDISVSKTLKLSCTIALA*VETTLEKQSPTV*KKSLKTPARLPSLAFIKL*ER 723 TDPGTLQMNALGMDISVSKTLKLSCTIALA*VETTLEKQSPTV*KKSLKTPARLPSLAFIKL*ER Subject 3185 TDPGTLQMNALGMDISVSKTLKLSCTIALA*VETTLEKQSPTV*KKSLKTPARLPSLAFIKL*ER 3379
Range 7: 2989 to 3381 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
257.7 bits(556) | 0.0 | 128/131(98%) | 0/131(0%) | Plus/Plus |
Query 333 PTRSTP*GRLRIEHSSSALGQSGRKRLMSLRGVASSTARSISLRMICGV*SSPLWLRQLRIGRRVFALITL*KXXXXXXXXXXXXXXXPWVTVFRV*SPPTLRQWCTIISTFWRRLYPCPKRSFVKYLGQL 725 PTRSTP*GRLRIE SS+ LGQSGRKRLMSLRGVASSTARSISLRMICGV*SSPLWLRQLRIGRRVFALITL*KPVRGVSPGSSSSSFRPWVTVFRV*SPPTLRQWCTIISTFWRRLYPCPKRSFVKYLGQL Subject 2989 PTRSTP*GRLRIERSSTPLGQSGRKRLMSLRGVASSTARSISLRMICGV*SSPLWLRQLRIGRRVFALITL*KPVRGVSPGSSSSSFRPWVTVFRV*SPPTLRQWCTIISTFWRRLYPCPKRSFVKYLGQL 3381
Range 8: 2659 to 2907 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
207.7 bits(447) | 0.0 | 83/83(100%) | 0/83(0%) | Plus/Plus |
Query 3 RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRW 251 RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRW Subject 2659 RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRW 2907
Range 9: 2779 to 3135 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
278.3 bits(601) | 0.0 | 116/119(97%) | 0/119(0%) | Minus/Minus |
Query 123 NPTYHPERYRPCCGRRDSP**HESFAT*LPQRRTRMFYSQTSLWC*ARRNRSCRQNPNRGLSS*RTH*NQLQRV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T 479 NPTYHPERYRPCCGRRDSP**HESFAT*LPQRRTR FYSQTSLWC*ARRNRSCRQNPNRGLSS*R H*NQLQ+V*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T Subject 2779 NPTYHPERYRPCCGRRDSP**HESFAT*LPQRRTRTFYSQTSLWC*ARRNRSCRQNPNRGLSS*RIH*NQLQQV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T 3135
Grapevine leafroll associated virus 3 isolate 621, complete genome
Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 11
Range 1: 2658 to 3380 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
569.2 bits(1236) | 0.0 | 239/241(99%) | 0/241(0%) | Plus/Plus |
Query 2 KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEFGVGAVRSQKTHVITGSRVVHSKVDISPDDMWGLVVAVMAQAIKDRAKSIRSYNFIKASEGSLAGVFKLFFQTVGDCFSSVVSTYAKAMVHDNFNVLETLISMPKAFICKVPGSV 724 KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFE+ VGAVRSQKTHVITGSRVVHSKVDISPDDMWGLVVAVMAQAIKDRAKSIRSYNFIKASEGSLAGVFKLFFQTVGDCFSSVVSTYAKAMVHDNFNVLETLISMPKAFICKVPGSV Subject 2658 KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAVRSQKTHVITGSRVVHSKVDISPDDMWGLVVAVMAQAIKDRAKSIRSYNFIKASEGSLAGVFKLFFQTVGDCFSSVVSTYAKAMVHDNFNVLETLISMPKAFICKVPGSV 3380
Range 2: 2658 to 3380 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
565.6 bits(1228) | 0.0 | 235/241(98%) | 0/241(0%) | Minus/Minus |
Query 2 N*PRYFTNERFGHGYKRLQNVEIIVHHCLSVGGDYTRKTVTHGLKEELEDPGETPLTGFYKVIRANTLRPILNCLSHNGDD*TPHIIRRDIDLAVDDATPRNDMSLLRPDCPNAELECSILKRPYGVERVGIDPVDKIRIEDYRLEGHTRTSYNGYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL 724 N*PRYFTNERFGHGYKRLQNVEIIVHHCLSVGGDYTRKTVTHGLKEELEDPGETPLTGFYKVIRANTLRPILNCLSHN D+*TPHIIRRDIDLAVDDATPRNDMSLLRPDCPN LECSILKRPYGVERVGIDPVDKIRI DYRLEGHTRTSYN YKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL Subject 2658 N*PRYFTNERFGHGYKRLQNVEIIVHHCLSVGGDYTRKTVTHGLKEELEDPGETPLTGFYKVIRANTLRPILNCLSHNSDN*TPHIIRRDIDLAVDDATPRNDMSLLRPDCPNGVLECSILKRPYGVERVGIDPVDKIRI*DYRLEGHTRTSYNRYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL 3380
Range 3: 2657 to 3136 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
377.7 bits(818) | 0.0 | 159/160(99%) | 0/160(0%) | Plus/Plus |
Query 1 EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTRCSWF*CVLQDDSPRFGFCRQDLFLRAQHHRDV*E*NIRVRRWGSQVAKDSCHYGESRRPQQGRYLSG*YVGF 480 EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYT CSWF*CVLQDDSPRFGFCRQDLFLRAQHHRDV*E*NIRVRRWGSQVAKDSCHYGESRRPQQGRYLSG*YVGF Subject 2657 EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTCCSWF*CVLQDDSPRFGFCRQDLFLRAQHHRDV*E*NIRVRRWGSQVAKDSCHYGESRRPQQGRYLSG*YVGF 3136
Range 4: 3188 to 3379 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.0 bits(308) | 0.0 | 64/64(100%) | 0/64(0%) | Plus/Plus |
Query 532 LL*LYKSQ*GESRRGLQALLSDRG*LFFECSLHLR*GNGAR*FQRFGDAYIHAQSVHL*STWVS 723 LL*LYKSQ*GESRRGLQALLSDRG*LFFECSLHLR*GNGAR*FQRFGDAYIHAQSVHL*STWVS Subject 3188 LL*LYKSQ*GESRRGLQALLSDRG*LFFECSLHLR*GNGAR*FQRFGDAYIHAQSVHL*STWVS 3379
Range 5: 2657 to 3136 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
361.7 bits(783) | 0.0 | 158/160(99%) | 0/160(0%) | Minus/Minus |
Query 1 KPHISSGEISTLLWTTRLPVMT*VFCDLTAPTPNSNVLFSNVPMVLSA*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF 480 KPHISSGEISTLLWTTRLPVMT*VFCDLTAPT SNVLFSNVPMVLSA*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF Subject 2657 KPHISSGEISTLLWTTRLPVMT*VFCDLTAPTAYSNVLFSNVPMVLSA*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF 3136
Range 6: 3185 to 3379 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
142.2 bits(304) | 0.0 | 65/65(100%) | 0/65(0%) | Minus/Minus |
Query 529 TDPGTLQMNALGMDISVSKTLKLSCTIALA*VETTLEKQSPTV*KKSLKTPARLPSLAFIKL*ER 723 TDPGTLQMNALGMDISVSKTLKLSCTIALA*VETTLEKQSPTV*KKSLKTPARLPSLAFIKL*ER Subject 3185 TDPGTLQMNALGMDISVSKTLKLSCTIALA*VETTLEKQSPTV*KKSLKTPARLPSLAFIKL*ER 3379
Range 7: 2989 to 3381 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
252.6 bits(545) | 0.0 | 126/131(96%) | 0/131(0%) | Plus/Plus |
Query 333 PTRSTP*GRLRIEHSSSALGQSGRKRLMSLRGVASSTARSISLRMICGV*SSPLWLRQLRIGRRVFALITL*KXXXXXXXXXXXXXXXPWVTVFRV*SPPTLRQWCTIISTFWRRLYPCPKRSFVKYLGQL 725 PTRSTP*GRLRIEHSS+ LGQSGRKRLMSLRGVASSTARSISLRMICGV* S LWL+QLRIGRRVFALITL*KPVRGVSPGSSSSSFRPWVTVFRV*SPPTLRQWCTIISTFWRRLYPCPKRSFVKYLGQL Subject 2989 PTRSTP*GRLRIEHSSTPLGQSGRKRLMSLRGVASSTARSISLRMICGV*LSLLWLKQLRIGRRVFALITL*KPVRGVSPGSSSSSFRPWVTVFRV*SPPTLRQWCTIISTFWRRLYPCPKRSFVKYLGQL 3381
Range 8: 2659 to 2907 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
207.7 bits(447) | 0.0 | 83/83(100%) | 0/83(0%) | Plus/Plus |
Query 3 RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRW 251 RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRW Subject 2659 RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRW 2907
Range 9: 2779 to 3135 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
280.6 bits(606) | 0.0 | 117/119(98%) | 0/119(0%) | Minus/Minus |
Query 123 NPTYHPERYRPCCGRRDSP**HESFAT*LPQRRTRMFYSQTSLWC*ARRNRSCRQNPNRGLSS*RTH*NQLQRV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T 479 NPTYHPERYRPCCGRRDSP**HESFAT*LPQRRTRMFYSQTSLWC*ARRNRSCRQNPN GLSS*RTH*NQLQ+V*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T Subject 2779 NPTYHPERYRPCCGRRDSP**HESFAT*LPQRRTRMFYSQTSLWC*ARRNRSCRQNPNLGLSS*RTH*NQLQQV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T 3135
Grapevine leafroll associated virus 3 isolate Cl 766, complete genome
Sequence ID: EU344893.1 Length: 17919 Number of Matches: 11
Range 1: 2079 to 2801 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
569.2 bits(1236) | 0.0 | 239/241(99%) | 0/241(0%) | Plus/Plus |
Query 2 KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEFGVGAVRSQKTHVITGSRVVHSKVDISPDDMWGLVVAVMAQAIKDRAKSIRSYNFIKASEGSLAGVFKLFFQTVGDCFSSVVSTYAKAMVHDNFNVLETLISMPKAFICKVPGSV 724 KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFE+ VGAVRSQKTHVITGSRVVHSKVDISPDDMWGLVVAVMAQAIKDRAKSIRSYNFIKASEGSLAGVFKLFFQTVGDCFSSVVSTYAKAMVHDNFNVLETLISMPKAFICKVPGSV Subject 2079 KREGDYLAYNVGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCRAQKSPGTEVTRRSLVPTFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIYSYALNTIGTFENRTFEYAVGAVRSQKTHVITGSRVVHSKVDISPDDMWGLVVAVMAQAIKDRAKSIRSYNFIKASEGSLAGVFKLFFQTVGDCFSSVVSTYAKAMVHDNFNVLETLISMPKAFICKVPGSV 2801
Range 2: 2079 to 2801 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
565.1 bits(1227) | 0.0 | 234/241(97%) | 0/241(0%) | Minus/Minus |
Query 2 N*PRYFTNERFGHGYKRLQNVEIIVHHCLSVGGDYTRKTVTHGLKEELEDPGETPLTGFYKVIRANTLRPILNCLSHNGDD*TPHIIRRDIDLAVDDATPRNDMSLLRPDCPNAELECSILKRPYGVERVGIDPVDKIRIEDYRLEGHTRTSYNGYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL 724 N PRYFT+ERFGH YKRLQNVEIIVHHCLSVGGDYTRKTVTHGLKEELEDPGETPLTGFYKVIRANTLRPILNCLSHNGDD*TPHIIR DIDLAVDDATPRND+SLLRPDCPN LECSILKRPYGVERVGIDPVDKIRIEDYRLEGHTRTSYNGYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL Subject 2079 NRPRYFTDERFGHRYKRLQNVEIIVHHCLSVGGDYTRKTVTHGLKEELEDPGETPLTGFYKVIRANTLRPILNCLSHNGDD*TPHIIRGDIDLAVDDATPRNDVSLLRPDCPNGVLECSILKRPYGVERVGIDPVDKIRIEDYRLEGHTRTSYNGYKHQRFAHERRDQ*PTRDLGSR*LLCPTHSKMMVAATVSLILKLKHVPG*SAYVRKGEKPAYVREGMFIHLTTLTNIVGQVITFPL 2801
Range 3: 2078 to 2557 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
373.6 bits(809) | 0.0 | 158/160(99%) | 0/160(0%) | Plus/Plus |
Query 1 EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTRCSWF*CVLQDDSPRFGFCRQDLFLRAQHHRDV*E*NIRVRRWGSQVAKDSCHYGESRRPQQGRYLSG*YVGF 480 EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTRCSWF*CVLQDDSPRFGFCRQDLFLRAQHHRDV*E*NIRVRRWGSQVAKDS HYGESRRPQQGRYL G*YVGF Subject 2078 EEGR*LPGLQCWSVW*DV*TFLL*RKRVFHLFLRTHFIRERV*A*V*GIPLRLPSSYYV*GTEVTWNRGHA*VIGPDVRGQIVGVYTRCSWF*CVLQDDSPRFGFCRQDLFLRAQHHRDV*E*NIRVRRWGSQVAKDSRHYGESRRPQQGRYLPG*YVGF 2557
Range 4: 2609 to 2797 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
139.4 bits(298) | 0.0 | 62/63(98%) | 0/63(0%) | Plus/Plus |
Query 532 LL*LYKSQ*GESRRGLQALLSDRG*LFFECSLHLR*GNGAR*FQRFGDAYIHAQSVHL*STWV 720 LL*LYKSQ*GESRRGLQALLSDRG*LFFECSLHLR*GNGAR*FQRFGDAYI+AQSVHL*STWV Subject 2609 LL*LYKSQ*GESRRGLQALLSDRG*LFFECSLHLR*GNGAR*FQRFGDAYIYAQSVHL*STWV 2797
Range 5: 2078 to 2557 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
361.7 bits(783) | 0.0 | 158/160(99%) | 0/160(0%) | Minus/Minus |
Query 1 KPHISSGEISTLLWTTRLPVMT*VFCDLTAPTPNSNVLFSNVPMVLSA*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF 480 KPHISSGEISTLLWTTRLPVMT*VFCDLTAPT SNVLFSNVPMVLSA*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF Subject 2078 KPHISSGEISTLLWTTRLPVMT*VFCDLTAPTAYSNVLFSNVPMVLSA*E*ILSTKSESRTIVLKDTLEPATTGINTNDLPTNVGTNDLRVTSVPGDFCALHIVR*W*PQRYPSYSSLNTFPDEVRT*EKVKNPLTLEKECSYISPH*PTL*AR*SPSLF 2557
Range 6: 2606 to 2800 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
140.4 bits(300) | 0.0 | 64/65(98%) | 0/65(0%) | Minus/Minus |
Query 529 TDPGTLQMNALGMDISVSKTLKLSCTIALA*VETTLEKQSPTV*KKSLKTPARLPSLAFIKL*ER 723 TDPGTLQMNALG+DISVSKTLKLSCTIALA*VETTLEKQSPTV*KKSLKTPARLPSLAFIKL*ER Subject 2606 TDPGTLQMNALGIDISVSKTLKLSCTIALA*VETTLEKQSPTV*KKSLKTPARLPSLAFIKL*ER 2800
Range 7: 2410 to 2802 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
243.9 bits(526) | 0.0 | 124/131(95%) | 0/131(0%) | Plus/Plus |
Query 333 PTRSTP*GRLRIEHSSSALGQSGRKRLMSLRGVASSTARSISLRMICGV*SSPLWLRQLRIGRRVFALITL*KXXXXXXXXXXXXXXXPWVTVFRV*SPPTLRQWCTIISTFWRRLYPCPKRSFVKYLGQL 725 PTRSTP*GRLRIEHSS+ LGQSGRKRL SLRGVASSTARSIS RMICGV*SSPLWLRQLRIGRRVFALITL*KPVRGVSPGSSSSSFRPWVTVFRV*SPPTLRQWCTIISTFWRRLY CPKRS VKYLG L Subject 2410 PTRSTP*GRLRIEHSSTPLGQSGRKRLTSLRGVASSTARSISPRMICGV*SSPLWLRQLRIGRRVFALITL*KPVRGVSPGSSSSSFRPWVTVFRV*SPPTLRQWCTIISTFWRRLYLCPKRSSVKYLGLL 2802
Range 8: 2080 to 2328 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
207.7 bits(447) | 0.0 | 83/83(100%) | 0/83(0%) | Plus/Plus |
Query 3 RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRW 251 RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRW Subject 2080 RGKVITWPTMLVSVVRCMNIPSLT*AGFSPFLTYALHPGTCLSLSMRDTVAATIILLCVGHRSHLEPRSRVGHWSRRSWANRW 2328
Range 9: 2200 to 2556 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
278.7 bits(602) | 0.0 | 117/119(98%) | 0/119(0%) | Minus/Minus |
Query 123 NPTYHPERYRPCCGRRDSP**HESFAT*LPQRRTRMFYSQTSLWC*ARRNRSCRQNPNRGLSS*RTH*NQLQRV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T 479 NPTYHP RYRPCCGRRDSP** ESFAT*LPQRRTRMFYSQTSLWC*ARRNRSCRQNPNRGLSS*RTH*NQLQRV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T Subject 2200 NPTYHPGRYRPCCGRRDSP**RESFAT*LPQRRTRMFYSQTSLWC*ARRNRSCRQNPNRGLSS*RTH*NQLQRV*TPTICPRTSGPMTYA*PRFQVTSVPYT**DDGSRNGIPHTQA*T 2556
Nucleotide Sequence (303 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
233.8 | 1291.8 | 29% | 5.011e-60 | 97% | EU259806.1 | |
230.6 | 1282.2 | 29% | 4.629e-59 | 97% | GQ352632.1 | |
227.9 | 1264.9 | 29% | 3.112e-58 | 95% | KX756668.1 | |
225.6 | 1263.5 | 29% | 1.523e-57 | 95% | KX701860.1 | |
225.1 | 1268.1 | 29% | 2.093e-57 | 95% | KJ174518.1 |
Alignments
Grapevine leafroll associated virus 3 isolate GP18, complete genome
Sequence ID: EU259806.1 Length: 18498 Number of Matches: 8
Range 1: 3688 to 3981 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
233.8 bits(504) | 0.0 | 98/98(100%) | 0/98(0%) | Minus/Plus |
Query 2 *LVGLRRRPFLALRRSFPQVHYSTTAV*LKMKGLMLWCAQRML*THRWAYWRRRV*L*AR**LDRKNFGVKFP*MTLLPLHCGIRCLLGFLWRLWVRP 295 *LVGLRRRPFLALRRSFPQVHYSTTAV*LKMKGLMLWCAQRML*THRWAYWRRRV*L*AR**LDRKNFGVKFP*MTLLPLHCGIRCLLGFLWRLWVRP Subject 3688 *LVGLRRRPFLALRRSFPQVHYSTTAV*LKMKGLMLWCAQRML*THRWAYWRRRV*L*AR**LDRKNFGVKFP*MTLLPLHCGIRCLLGFLWRLWVRP 3981
Range 2: 3681 to 3980 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
229.7 bits(495) | 0.0 | 98/100(98%) | 0/100(0%) | Plus/Minus |
Query 3 GRTQRRHKNPNKHLIPQCKGSKVIQGNFTPKFFRSSYYLAHSYTRRLQ*AHR*VYSILCAHQSIKPFIFS*TAVVE**TCGKERRNARKGLRRSPTSY*T 302 GRTQRRHKNPNKHLIPQCKGSKVI GNFTPKFFRSSYYLAHSYTRRLQ*AHR*VYSILCAHQSIKPFIFS*TAVVE**TCGKERRNARKGLRRSPTSY T Subject 3681 GRTQRRHKNPNKHLIPQCKGSKVI*GNFTPKFFRSSYYLAHSYTRRLQ*AHR*VYSILCAHQSIKPFIFS*TAVVE**TCGKERRNARKGLRRSPTSYQT 3980
Range 3: 3680 to 3889 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
175.6 bits(377) | 0.0 | 68/70(97%) | 0/70(0%) | Minus/Plus |
Query 94 GFSSSWGCDEGLFWHYVVLFHRFTILRPRFN*R*KA*CSGAHRECYKLTGGLTGDVACSCEQGSSWIERI 303 GF SSWGCDEGLFWHYVVLFHRFTILRPRF+*R*KA*CSGAHRECYKLTGGLTGDVACSCEQGSSWIERI Subject 3680 GFGSSWGCDEGLFWHYVVLFHRFTILRPRFS*R*KA*CSGAHRECYKLTGGLTGDVACSCEQGSSWIERI 3889
Range 4: 3926 to 3982 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
56.1 bits(116) | 0.0 | 19/19(100%) | 0/19(0%) | Minus/Plus |
Query 1 CIAE*GAYWDFCGVFGCGP 57 CIAE*GAYWDFCGVFGCGP Subject 3926 CIAE*GAYWDFCGVFGCGP 3982
Range 5: 3682 to 3981 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
210.9 bits(454) | 0.0 | 98/100(98%) | 0/100(0%) | Plus/Minus |
Query 2 GPHPKTPQKSQ*APYSAMQR**SHSRKLHSKILSIQLLPCSQLHATXXXXXXXXL*HSLCAPEHQAFHLQLNRGRRIVNLWKRTT*CQKRPSSQPHELLN 301 GPHPKTPQKSQ*APYSAMQR**SH RKLHSKILSIQLLPCSQLHATSPVSPPVSL*HSLCAPEHQAFHLQLNRGRRIVNLWKRTT*CQKRPSSQPHEL N Subject 3682 GPHPKTPQKSQ*APYSAMQR**SHLRKLHSKILSIQLLPCSQLHATSPVSPPVSL*HSLCAPEHQAFHLQLNRGRRIVNLWKRTT*CQKRPSSQPHELPN 3981
Range 6: 3681 to 3980 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
184.6 bits(398) | 0.0 | 99/100(99%) | 0/100(0%) | Minus/Plus |
Query 3 GLVARGAATKAXXXXXXXXXXXXXFYDRGLTEDERLDALVRTENAINSPVGLLETSRVAVSKVVAGSKEFWSEVSLNDFTTFALRNKVLIGIFVASLGAA 302 GLVARGAATKAFSGITSFFSTGSLFYDRGL EDERLDALVRTENAINSPVGLLETSRVAVSKVVAGSKEFWSEVSLNDFTTFALRNKVLIGIFVASLGAA Subject 3681 GLVARGAATKAFSGITSFFSTGSLFYDRGLAEDERLDALVRTENAINSPVGLLETSRVAVSKVVAGSKEFWSEVSLNDFTTFALRNKVLIGIFVASLGAA 3980
Range 7: 3791 to 3982 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.4 bits(314) | 0.0 | 64/64(100%) | 0/64(0%) | Plus/Minus |
Query 1 GAAPKDATKIPISTLFRNAKVVKSFKETSLQNSFDPATTLLTATRDVSSKPTGEFIAFSVRTRA 192 GAAPKDATKIPISTLFRNAKVVKSFKETSLQNSFDPATTLLTATRDVSSKPTGEFIAFSVRTRA Subject 3791 GAAPKDATKIPISTLFRNAKVVKSFKETSLQNSFDPATTLLTATRDVSSKPTGEFIAFSVRTRA 3982
Grapevine leafroll associated virus 3 isolate 623, complete genome
Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 8
Range 1: 3691 to 3981 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
230.6 bits(497) | 0.0 | 96/97(99%) | 0/97(0%) | Minus/Plus |
Query 2 LVGLRRRPFLALRRSFPQVHYSTTAV*LKMKGLMLWCAQRML*THRWAYWRRRV*L*AR**LDRKNFGVKFP*MTLLPLHCGIRCLLGFLWRLWVRP 292 LVGLRRRPFLALRRSFPQVHYSTTAV*LKMKGLMLWCAQRML*THRWAYWRRRV*L*AR**LDRKNFGVKFP*MTLLPL+CGIRCLLGFLWRLWVRP Subject 3691 LVGLRRRPFLALRRSFPQVHYSTTAV*LKMKGLMLWCAQRML*THRWAYWRRRV*L*AR**LDRKNFGVKFP*MTLLPLYCGIRCLLGFLWRLWVRP 3981
Range 2: 3681 to 3980 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
226.5 bits(488) | 0.0 | 97/100(97%) | 0/100(0%) | Plus/Minus |
Query 3 GRTQRRHKNPNKHLIPQCKGSKVIQGNFTPKFFRSSYYLAHSYTRRLQ*AHR*VYSILCAHQSIKPFIFS*TAVVE**TCGKERRNARKGLRRSPTSY*T 302 GRTQRRHKNPNKHLIPQ KGSKVIQGNFTPKFFRSSYYLAHSYTRRLQ*AHR*VYSILCAHQSIKPFIFS*TAVVE**TCGKERRNARKGLRRSPTS+ T Subject 3681 GRTQRRHKNPNKHLIPQYKGSKVIQGNFTPKFFRSSYYLAHSYTRRLQ*AHR*VYSILCAHQSIKPFIFS*TAVVE**TCGKERRNARKGLRRSPTSHQT 3980
Range 3: 3680 to 3889 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
176.1 bits(378) | 0.0 | 68/70(97%) | 0/70(0%) | Minus/Plus |
Query 94 GFSSSWGCDEGLFWHYVVLFHRFTILRPRFN*R*KA*CSGAHRECYKLTGGLTGDVACSCEQGSSWIERI 303 GF SWGCDEGLFWHYVVLFHRFTILRPRFN*R*KA*CSGAHRECYKLTGGLTGDVACSCEQGSSWIERI Subject 3680 GFGGSWGCDEGLFWHYVVLFHRFTILRPRFN*R*KA*CSGAHRECYKLTGGLTGDVACSCEQGSSWIERI 3889
Range 4: 3926 to 3982 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
56.1 bits(116) | 0.0 | 19/19(100%) | 0/19(0%) | Minus/Plus |
Query 1 CIAE*GAYWDFCGVFGCGP 57 CIAE*GAYWDFCGVFGCGP Subject 3926 CIAE*GAYWDFCGVFGCGP 3982
Range 5: 3691 to 3981 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
208.6 bits(449) | 0.0 | 96/97(99%) | 0/97(0%) | Plus/Minus |
Query 2 GPHPKTPQKSQ*APYSAMQR**SHSRKLHSKILSIQLLPCSQLHATXXXXXXXXL*HSLCAPEHQAFHLQLNRGRRIVNLWKRTT*CQKRPSSQPHE 292 GPHPKTPQKSQ*APYSA+QR**SHSRKLHSKILSIQLLPCSQLHATSPVSPPVSL*HSLCAPEHQAFHLQLNRGRRIVNLWKRTT*CQKRPSSQPHE Subject 3691 GPHPKTPQKSQ*APYSAIQR**SHSRKLHSKILSIQLLPCSQLHATSPVSPPVSL*HSLCAPEHQAFHLQLNRGRRIVNLWKRTT*CQKRPSSQPHE 3981
Range 6: 3681 to 3980 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
185.1 bits(399) | 0.0 | 99/100(99%) | 0/100(0%) | Minus/Plus |
Query 3 GLVARGAATKAXXXXXXXXXXXXXFYDRGLTEDERLDALVRTENAINSPVGLLETSRVAVSKVVAGSKEFWSEVSLNDFTTFALRNKVLIGIFVASLGAA 302 GLVARGAATKAFSGITSFFSTGSLFYDRGLTEDERLDALVRTENAINSPVGLLETSRVAVSKVVAGSKEFWSEVSLNDFTTF LRNKVLIGIFVASLGAA Subject 3681 GLVARGAATKAFSGITSFFSTGSLFYDRGLTEDERLDALVRTENAINSPVGLLETSRVAVSKVVAGSKEFWSEVSLNDFTTFVLRNKVLIGIFVASLGAA 3980
Range 7: 3791 to 3982 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
142.6 bits(310) | 0.0 | 63/64(98%) | 0/64(0%) | Plus/Minus |
Query 1 GAAPKDATKIPISTLFRNAKVVKSFKETSLQNSFDPATTLLTATRDVSSKPTGEFIAFSVRTRA 192 GAAPKDATKIPISTLFRN KVVKSFKETSLQNSFDPATTLLTATRDVSSKPTGEFIAFSVRTRA Subject 3791 GAAPKDATKIPISTLFRNTKVVKSFKETSLQNSFDPATTLLTATRDVSSKPTGEFIAFSVRTRA 3982
Grapevine leafroll associated virus 3 isolate TC BR, complete genome
Sequence ID: KX756668.1 Length: 18498 Number of Matches: 8
Range 1: 3688 to 3981 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.9 bits(491) | 0.0 | 95/98(97%) | 0/98(0%) | Minus/Plus |
Query 2 *LVGLRRRPFLALRRSFPQVHYSTTAV*LKMKGLMLWCAQRML*THRWAYWRRRV*L*AR**LDRKNFGVKFP*MTLLPLHCGIRCLLGFLWRLWVRP 295 *LVGLRRRPFLALRRSFPQVHYSTTAV*LKMKGLMLWCAQRML*THRWAYWRRR+*L*AR**LDRKNFGVKFP*MTLLPL+CGIRC LGFLWRLWVRP Subject 3688 *LVGLRRRPFLALRRSFPQVHYSTTAV*LKMKGLMLWCAQRML*THRWAYWRRRM*L*AR**LDRKNFGVKFP*MTLLPLYCGIRCFLGFLWRLWVRP 3981
Range 2: 3681 to 3980 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
223.3 bits(481) | 0.0 | 96/100(96%) | 0/100(0%) | Plus/Minus |
Query 3 GRTQRRHKNPNKHLIPQCKGSKVIQGNFTPKFFRSSYYLAHSYTRRLQ*AHR*VYSILCAHQSIKPFIFS*TAVVE**TCGKERRNARKGLRRSPTSY*T 302 GRTQRRHKNP KHLIPQ KGSKVIQGNFTPKFFRSSYYLAHSY RRLQ*AHR*VYSILCAHQSIKPFIFS*TAVVE**TCGKERRNARKGLRRSPTSY T Subject 3681 GRTQRRHKNPKKHLIPQYKGSKVIQGNFTPKFFRSSYYLAHSYMRRLQ*AHR*VYSILCAHQSIKPFIFS*TAVVE**TCGKERRNARKGLRRSPTSYQT 3980
Range 3: 3682 to 3981 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
209.6 bits(451) | 0.0 | 97/100(97%) | 0/100(0%) | Plus/Minus |
Query 2 GPHPKTPQKSQ*APYSAMQR**SHSRKLHSKILSIQLLPCSQLHATXXXXXXXXL*HSLCAPEHQAFHLQLNRGRRIVNLWKRTT*CQKRPSSQPHELLN 301 GPHPKTPQKSQ APYSA+QR**SHSRKLHSKILSIQLLPCSQLHATSPVSPPVSL*HSLCAPEHQAFHLQLNRGRRIVNLWKRTT*CQKRPSSQPHEL N Subject 3682 GPHPKTPQKSQEAPYSAIQR**SHSRKLHSKILSIQLLPCSQLHATSPVSPPVSL*HSLCAPEHQAFHLQLNRGRRIVNLWKRTT*CQKRPSSQPHELPN 3981
Range 4: 3680 to 3889 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
177.9 bits(382) | 0.0 | 69/70(99%) | 0/70(0%) | Minus/Plus |
Query 94 GFSSSWGCDEGLFWHYVVLFHRFTILRPRFN*R*KA*CSGAHRECYKLTGGLTGDVACSCEQGSSWIERI 303 GF SSWGCDEGLFWHYVVLFHRFTILRPRFN*R*KA*CSGAHRECYKLTGGLTGDVACSCEQGSSWIERI Subject 3680 GFGSSWGCDEGLFWHYVVLFHRFTILRPRFN*R*KA*CSGAHRECYKLTGGLTGDVACSCEQGSSWIERI 3889
Range 5: 3926 to 3982 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.9 bits(107) | 0.0 | 18/19(95%) | 0/19(0%) | Minus/Plus |
Query 1 CIAE*GAYWDFCGVFGCGP 57 CIAE*GA WDFCGVFGCGP Subject 3926 CIAE*GASWDFCGVFGCGP 3982
Range 6: 3681 to 3980 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
181.9 bits(392) | 0.0 | 97/100(97%) | 0/100(0%) | Minus/Plus |
Query 3 GLVARGAATKAXXXXXXXXXXXXXFYDRGLTEDERLDALVRTENAINSPVGLLETSRVAVSKVVAGSKEFWSEVSLNDFTTFALRNKVLIGIFVASLGAA 302 GLVARGAATKAFSGITSFFSTGSLFYDRGLTEDERLDALVRTENAINSPVGLLETS VAVSKVVAGSKEFWSEVSLNDFTTF LRNKVL+GIFVASLGAA Subject 3681 GLVARGAATKAFSGITSFFSTGSLFYDRGLTEDERLDALVRTENAINSPVGLLETSHVAVSKVVAGSKEFWSEVSLNDFTTFVLRNKVLLGIFVASLGAA 3980
Range 7: 3791 to 3982 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
135.8 bits(295) | 0.0 | 61/64(95%) | 0/64(0%) | Plus/Minus |
Query 1 GAAPKDATKIPISTLFRNAKVVKSFKETSLQNSFDPATTLLTATRDVSSKPTGEFIAFSVRTRA 192 GAAPKDATKIP STLFRN KVVKSFKETSLQNSFDPATTLLTAT DVSSKPTGEFIAFSVRTRA Subject 3791 GAAPKDATKIPRSTLFRNTKVVKSFKETSLQNSFDPATTLLTATCDVSSKPTGEFIAFSVRTRA 3982
Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome
Sequence ID: KX701860.1 Length: 18020 Number of Matches: 8
Range 1: 3206 to 3499 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
225.6 bits(486) | 0.0 | 95/98(97%) | 0/98(0%) | Minus/Plus |
Query 2 *LVGLRRRPFLALRRSFPQVHYSTTAV*LKMKGLMLWCAQRML*THRWAYWRRRV*L*AR**LDRKNFGVKFP*MTLLPLHCGIRCLLGFLWRLWVRP 295 *LVGLRRRPFLALRRSFPQVHYSTTAV*LKMKGLMLWCAQRML*THRWAYWRRRV*L*AR**LDRKNFGVKFP*MTLLPL+C IRCLLGFLWRLWV+P Subject 3206 *LVGLRRRPFLALRRSFPQVHYSTTAV*LKMKGLMLWCAQRML*THRWAYWRRRV*L*AR**LDRKNFGVKFP*MTLLPLYCRIRCLLGFLWRLWVQP 3499
Range 2: 3199 to 3498 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
220.5 bits(475) | 0.0 | 96/100(96%) | 0/100(0%) | Plus/Minus |
Query 3 GRTQRRHKNPNKHLIPQCKGSKVIQGNFTPKFFRSSYYLAHSYTRRLQ*AHR*VYSILCAHQSIKPFIFS*TAVVE**TCGKERRNARKGLRRSPTSY*T 302 G TQRRHKNPNKHLI Q KGSKVIQGNFTPKFFRSSYYLAHSYTRRLQ*AHR*VYSILCAHQSIKPFIFS*TAVVE**TCGKERRNARKGLRRSPTSY T Subject 3199 GCTQRRHKNPNKHLILQYKGSKVIQGNFTPKFFRSSYYLAHSYTRRLQ*AHR*VYSILCAHQSIKPFIFS*TAVVE**TCGKERRNARKGLRRSPTSYQT 3498
Range 3: 3198 to 3407 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
177.9 bits(382) | 0.0 | 69/70(99%) | 0/70(0%) | Minus/Plus |
Query 94 GFSSSWGCDEGLFWHYVVLFHRFTILRPRFN*R*KA*CSGAHRECYKLTGGLTGDVACSCEQGSSWIERI 303 GF SSWGCDEGLFWHYVVLFHRFTILRPRFN*R*KA*CSGAHRECYKLTGGLTGDVACSCEQGSSWIERI Subject 3198 GFGSSWGCDEGLFWHYVVLFHRFTILRPRFN*R*KA*CSGAHRECYKLTGGLTGDVACSCEQGSSWIERI 3407
Range 4: 3444 to 3500 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.3 bits(110) | 0.0 | 18/19(95%) | 0/19(0%) | Minus/Plus |
Query 1 CIAE*GAYWDFCGVFGCGP 57 CIAE*GAYWDFCGVFGC P Subject 3444 CIAE*GAYWDFCGVFGCSP 3500
Range 5: 3200 to 3499 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
207.3 bits(446) | 0.0 | 97/100(97%) | 0/100(0%) | Plus/Minus |
Query 2 GPHPKTPQKSQ*APYSAMQR**SHSRKLHSKILSIQLLPCSQLHATXXXXXXXXL*HSLCAPEHQAFHLQLNRGRRIVNLWKRTT*CQKRPSSQPHELLN 301 G HPKTPQKSQ*APYSA+QR**SHSRKLHSKILSIQLLPCSQLHATSPVSPPVSL*HSLCAPEHQAFHLQLNRGRRIVNLWKRTT*CQKRPSSQPHEL N Subject 3200 GLHPKTPQKSQ*APYSAIQR**SHSRKLHSKILSIQLLPCSQLHATSPVSPPVSL*HSLCAPEHQAFHLQLNRGRRIVNLWKRTT*CQKRPSSQPHELPN 3499
Range 6: 3199 to 3498 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
183.2 bits(395) | 0.0 | 98/100(98%) | 0/100(0%) | Minus/Plus |
Query 3 GLVARGAATKAXXXXXXXXXXXXXFYDRGLTEDERLDALVRTENAINSPVGLLETSRVAVSKVVAGSKEFWSEVSLNDFTTFALRNKVLIGIFVASLGAA 302 GLVARGAATKAFSGITSFFSTGSLFYDRGLTEDERLDALVRTENAINSPVGLLETSRVAVSKVVAGSKEFWSEVSLNDFTTF L+NKVLIGIFVASLGAA Subject 3199 GLVARGAATKAFSGITSFFSTGSLFYDRGLTEDERLDALVRTENAINSPVGLLETSRVAVSKVVAGSKEFWSEVSLNDFTTFVLQNKVLIGIFVASLGAA 3498
Range 7: 3309 to 3500 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
139.0 bits(302) | 0.0 | 62/64(97%) | 0/64(0%) | Plus/Minus |
Query 1 GAAPKDATKIPISTLFRNAKVVKSFKETSLQNSFDPATTLLTATRDVSSKPTGEFIAFSVRTRA 192 GAAPKDATKIPISTLF N KVVKSFKETSLQNSFDPATTLLTATRDVSSKPTGEFIAFSVRTRA Subject 3309 GAAPKDATKIPISTLFCNTKVVKSFKETSLQNSFDPATTLLTATRDVSSKPTGEFIAFSVRTRA 3500
Grapevine leafroll associated virus 3, complete genome
Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 8
Range 1: 3688 to 3981 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
225.1 bits(485) | 0.0 | 95/98(97%) | 0/98(0%) | Minus/Plus |
Query 2 *LVGLRRRPFLALRRSFPQVHYSTTAV*LKMKGLMLWCAQRML*THRWAYWRRRV*L*AR**LDRKNFGVKFP*MTLLPLHCGIRCLLGFLWRLWVRP 295 *LVGLRRRPFLALRRSFPQVHYSTTAV*LKMKGLMLWCAQ ML*THRWAYWRRRV*L*AR**LDRKN GVKFP*MTLLPL+CGIRCLLGFLWRLWVRP Subject 3688 *LVGLRRRPFLALRRSFPQVHYSTTAV*LKMKGLMLWCAQGML*THRWAYWRRRV*L*AR**LDRKNLGVKFP*MTLLPLYCGIRCLLGFLWRLWVRP 3981
Range 2: 3681 to 3980 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
224.2 bits(483) | 0.0 | 96/100(96%) | 0/100(0%) | Plus/Minus |
Query 3 GRTQRRHKNPNKHLIPQCKGSKVIQGNFTPKFFRSSYYLAHSYTRRLQ*AHR*VYSILCAHQSIKPFIFS*TAVVE**TCGKERRNARKGLRRSPTSY*T 302 GRTQRRHKNPNKHLIPQ KGSKVIQGNFTP+FFRSSYYLAHSYTRRLQ*AHR*VYSI CAHQSIKPFIFS*TAVVE**TCGKERRNARKGLRRSPTSY T Subject 3681 GRTQRRHKNPNKHLIPQYKGSKVIQGNFTPRFFRSSYYLAHSYTRRLQ*AHR*VYSIPCAHQSIKPFIFS*TAVVE**TCGKERRNARKGLRRSPTSYQT 3980
Range 3: 3680 to 3889 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
177.9 bits(382) | 0.0 | 69/70(99%) | 0/70(0%) | Minus/Plus |
Query 94 GFSSSWGCDEGLFWHYVVLFHRFTILRPRFN*R*KA*CSGAHRECYKLTGGLTGDVACSCEQGSSWIERI 303 GF SSWGCDEGLFWHYVVLFHRFTILRPRFN*R*KA*CSGAHRECYKLTGGLTGDVACSCEQGSSWIERI Subject 3680 GFGSSWGCDEGLFWHYVVLFHRFTILRPRFN*R*KA*CSGAHRECYKLTGGLTGDVACSCEQGSSWIERI 3889
Range 4: 3926 to 3982 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
56.1 bits(116) | 0.0 | 19/19(100%) | 0/19(0%) | Minus/Plus |
Query 1 CIAE*GAYWDFCGVFGCGP 57 CIAE*GAYWDFCGVFGCGP Subject 3926 CIAE*GAYWDFCGVFGCGP 3982
Range 5: 3682 to 3981 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
211.8 bits(456) | 0.0 | 98/100(98%) | 0/100(0%) | Plus/Minus |
Query 2 GPHPKTPQKSQ*APYSAMQR**SHSRKLHSKILSIQLLPCSQLHATXXXXXXXXL*HSLCAPEHQAFHLQLNRGRRIVNLWKRTT*CQKRPSSQPHELLN 301 GPHPKTPQKSQ*APYSA+QR**SHSRKLHSKILSIQLLPCSQLHATSPVSPPVSL*HSLCAPEHQAFHLQLNRGRRIVNLWKRTT*CQKRPSSQPHEL N Subject 3682 GPHPKTPQKSQ*APYSAIQR**SHSRKLHSKILSIQLLPCSQLHATSPVSPPVSL*HSLCAPEHQAFHLQLNRGRRIVNLWKRTT*CQKRPSSQPHELPN 3981
Range 6: 3681 to 3980 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
178.2 bits(384) | 0.0 | 97/100(97%) | 0/100(0%) | Minus/Plus |
Query 3 GLVARGAATKAXXXXXXXXXXXXXFYDRGLTEDERLDALVRTENAINSPVGLLETSRVAVSKVVAGSKEFWSEVSLNDFTTFALRNKVLIGIFVASLGAA 302 GLVARGAATKAFSGITSFFSTGSLFYDRGLTEDERLDALVRT NAINSPVGLLETSRVAVSKVVAGSKE WSEVSLNDFTTF LRNKVLIGIFVASLGAA Subject 3681 GLVARGAATKAFSGITSFFSTGSLFYDRGLTEDERLDALVRTGNAINSPVGLLETSRVAVSKVVAGSKESWSEVSLNDFTTFVLRNKVLIGIFVASLGAA 3980
Range 7: 3791 to 3982 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
138.1 bits(300) | 0.0 | 61/64(95%) | 0/64(0%) | Plus/Minus |
Query 1 GAAPKDATKIPISTLFRNAKVVKSFKETSLQNSFDPATTLLTATRDVSSKPTGEFIAFSVRTRA 192 GAAPKDATKIPISTLFRN KVVKSFKETSLQ+SFDPATTLLTATRDVSSKPTGEFIAF VRTRA Subject 3791 GAAPKDATKIPISTLFRNTKVVKSFKETSLQDSFDPATTLLTATRDVSSKPTGEFIAFPVRTRA 3982
Nucleotide Sequence (566 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
391.0 | 2240.3 | 28% | 6.687e-107 | 81% | JX559645.1 | |
391.0 | 2225.7 | 28% | 6.687e-107 | 81% | NC_004667.1 | |
391.0 | 2225.7 | 28% | 6.687e-107 | 81% | AF037268.2 | |
391.0 | 2212.8 | 28% | 6.687e-107 | 81% | GQ352631.1 | |
391.0 | 2240.3 | 28% | 6.687e-107 | 81% | GU983863.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 7
Range 1: 13240 to 13734 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
391.0 bits(847) | 0.0 | 163/165(99%) | 0/165(0%) | Plus/Plus |
Query 1 EMTTGKGGKICPEIAEKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGKVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNENQATG 495 EMTTGKGGKICPEIAEKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKG+VEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNENQ TG Subject 13240 EMTTGKGGKICPEIAEKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGRVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNENQVTG 13734
Range 2: 13242 to 13748 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
384.6 bits(833) | 0.0 | 164/169(97%) | 0/169(0%) | Plus/Plus |
Query 3 DDDR*RGKDMPGDRREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRRYVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERKPGDRTTKHT 509 DDDR*RGKDMPGDRREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRRYVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERKPG R T Subject 13242 DDDR*RGKDMPGDRREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRRYVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERKPGYRNYSTT 13748
Range 3: 13241 to 13732 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
383.2 bits(830) | 0.0 | 163/164(99%) | 0/164(0%) | Minus/Minus |
Query 2 RSPGFRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTYRLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTSRRSPGISFPLYLSSS 493 R PGFRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTYRLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTSRRSPGISFPLYLSSS Subject 13241 R*PGFRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTYRLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTSRRSPGISFPLYLSSS 13732
Range 4: 13240 to 13734 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
382.3 bits(828) | 0.0 | 163/165(99%) | 0/165(0%) | Minus/Minus |
Query 1 SGRLVFVRLDIVYNASVICGVDRISHLRSYTISRVIR*RTVYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLDFSLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLLGDLRAYLSPFTCRHL 495 SG LVFVRLDIVYNASVICGVDRISHLRSYTISRVIR*RTVYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLD SLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLLGDLRAYLSPFTCRHL Subject 13240 SGNLVFVRLDIVYNASVICGVDRISHLRSYTISRVIR*RTVYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLDSSLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLLGDLRAYLSPFTCRHL 13734
Range 5: 13242 to 13733 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
355.3 bits(769) | 0.0 | 162/164(99%) | 0/164(0%) | Minus/Minus |
Query 3 PVAWFSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTFPFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVI 494 PV WFSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFST PFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVI Subject 13242 PVTWFSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTLPFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVI 13733
Range 6: 13241 to 13633 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
295.2 bits(638) | 0.0 | 130/131(99%) | 0/131(0%) | Plus/Plus |
Query 2 R*RQVKGERYARRSPRSWCAV*WRKTIS*D*PQ*WP**LYWYTTPFTAQTLPGLKDARISSM*G*REKSRRFRYGG*KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIGRR*VM*TVR*RMT 394 R*RQVKGERYARRSPRSWCAV*WRKTIS*D*PQ*WP**LYWYTTPFTAQTLPGLKDARISSM*G*RE+SRRFRYGG*KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIGRR*VM*TVR*RMT Subject 13241 R*RQVKGERYARRSPRSWCAV*WRKTIS*D*PQ*WP**LYWYTTPFTAQTLPGLKDARISSM*G*REESRRFRYGG*KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIGRR*VM*TVR*RMT 13633
Grapevine leafroll associated virus 3, complete genome
Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 7
Range 1: 12661 to 13155 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
391.0 bits(847) | 0.0 | 163/165(99%) | 0/165(0%) | Plus/Plus |
Query 1 EMTTGKGGKICPEIAEKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGKVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNENQATG 495 EMTTGKGGKICPEIAEKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKG+VEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNENQ TG Subject 12661 EMTTGKGGKICPEIAEKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGRVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNENQVTG 13155
Range 2: 12663 to 13169 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
380.0 bits(823) | 0.0 | 163/169(96%) | 0/169(0%) | Plus/Plus |
Query 3 DDDR*RGKDMPGDRREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRRYVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERKPGDRTTKHT 509 DDDR*RGKDMPGDRREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRR VSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERKPG R T Subject 12663 DDDR*RGKDMPGDRREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRRDVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERKPGYRNYSTT 13169
Range 3: 12661 to 13155 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
379.5 bits(822) | 0.0 | 162/165(98%) | 0/165(0%) | Minus/Minus |
Query 1 SGRLVFVRLDIVYNASVICGVDRISHLRSYTISRVIR*RTVYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLDFSLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLLGDLRAYLSPFTCRHL 495 SG LVFVRLDIVYNASVICGVDRISHLRSYTISRVIR*R VYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLD SLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLLGDLRAYLSPFTCRHL Subject 12661 SGNLVFVRLDIVYNASVICGVDRISHLRSYTISRVIR*RPVYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLDSSLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLLGDLRAYLSPFTCRHL 13155
Range 4: 12662 to 13153 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
379.1 bits(821) | 0.0 | 162/164(99%) | 0/164(0%) | Minus/Minus |
Query 2 RSPGFRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTYRLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTSRRSPGISFPLYLSSS 493 R PGFRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLT RLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTSRRSPGISFPLYLSSS Subject 12662 R*PGFRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTSRLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTSRRSPGISFPLYLSSS 13153
Range 5: 12663 to 13154 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
355.3 bits(769) | 0.0 | 162/164(99%) | 0/164(0%) | Minus/Minus |
Query 3 PVAWFSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTFPFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVI 494 PV WFSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFST PFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVI Subject 12663 PVTWFSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTLPFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVI 13154
Range 6: 12662 to 13054 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
292.0 bits(631) | 0.0 | 129/131(98%) | 0/131(0%) | Plus/Plus |
Query 2 R*RQVKGERYARRSPRSWCAV*WRKTIS*D*PQ*WP**LYWYTTPFTAQTLPGLKDARISSM*G*REKSRRFRYGG*KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIGRR*VM*TVR*RMT 394 R*RQVKGERYARRSPRSWCAV*WRKTIS*D*PQ*WP**LYWYTTPFTAQTLPGLKDARISSM*G*RE+SRRFRYGG*KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIGRR*VM*T R*RMT Subject 12662 R*RQVKGERYARRSPRSWCAV*WRKTIS*D*PQ*WP**LYWYTTPFTAQTLPGLKDARISSM*G*REESRRFRYGG*KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIGRR*VM*TGR*RMT 13054
Grapevine leafroll associated virus 3, complete genome
Sequence ID: AF037268.2 Length: 17919 Number of Matches: 7
Range 1: 12661 to 13155 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
391.0 bits(847) | 0.0 | 163/165(99%) | 0/165(0%) | Plus/Plus |
Query 1 EMTTGKGGKICPEIAEKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGKVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNENQATG 495 EMTTGKGGKICPEIAEKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKG+VEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNENQ TG Subject 12661 EMTTGKGGKICPEIAEKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGRVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNENQVTG 13155
Range 2: 12663 to 13169 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
380.0 bits(823) | 0.0 | 163/169(96%) | 0/169(0%) | Plus/Plus |
Query 3 DDDR*RGKDMPGDRREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRRYVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERKPGDRTTKHT 509 DDDR*RGKDMPGDRREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRR VSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERKPG R T Subject 12663 DDDR*RGKDMPGDRREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRRDVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERKPGYRNYSTT 13169
Range 3: 12661 to 13155 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
379.5 bits(822) | 0.0 | 162/165(98%) | 0/165(0%) | Minus/Minus |
Query 1 SGRLVFVRLDIVYNASVICGVDRISHLRSYTISRVIR*RTVYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLDFSLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLLGDLRAYLSPFTCRHL 495 SG LVFVRLDIVYNASVICGVDRISHLRSYTISRVIR*R VYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLD SLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLLGDLRAYLSPFTCRHL Subject 12661 SGNLVFVRLDIVYNASVICGVDRISHLRSYTISRVIR*RPVYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLDSSLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLLGDLRAYLSPFTCRHL 13155
Range 4: 12662 to 13153 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
379.1 bits(821) | 0.0 | 162/164(99%) | 0/164(0%) | Minus/Minus |
Query 2 RSPGFRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTYRLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTSRRSPGISFPLYLSSS 493 R PGFRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLT RLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTSRRSPGISFPLYLSSS Subject 12662 R*PGFRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTSRLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTSRRSPGISFPLYLSSS 13153
Range 5: 12663 to 13154 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
355.3 bits(769) | 0.0 | 162/164(99%) | 0/164(0%) | Minus/Minus |
Query 3 PVAWFSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTFPFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVI 494 PV WFSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFST PFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVI Subject 12663 PVTWFSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTLPFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVI 13154
Range 6: 12662 to 13054 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
292.0 bits(631) | 0.0 | 129/131(98%) | 0/131(0%) | Plus/Plus |
Query 2 R*RQVKGERYARRSPRSWCAV*WRKTIS*D*PQ*WP**LYWYTTPFTAQTLPGLKDARISSM*G*REKSRRFRYGG*KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIGRR*VM*TVR*RMT 394 R*RQVKGERYARRSPRSWCAV*WRKTIS*D*PQ*WP**LYWYTTPFTAQTLPGLKDARISSM*G*RE+SRRFRYGG*KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIGRR*VM*T R*RMT Subject 12662 R*RQVKGERYARRSPRSWCAV*WRKTIS*D*PQ*WP**LYWYTTPFTAQTLPGLKDARISSM*G*REESRRFRYGG*KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIGRR*VM*TGR*RMT 13054
Grapevine leafroll associated virus 3 isolate 621, complete genome
Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 7
Range 1: 13240 to 13734 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
391.0 bits(847) | 0.0 | 163/165(99%) | 0/165(0%) | Plus/Plus |
Query 1 EMTTGKGGKICPEIAEKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGKVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNENQATG 495 EMTTGKGGKICPEIAEKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKG+VEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNENQ TG Subject 13240 EMTTGKGGKICPEIAEKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGRVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNENQVTG 13734
Range 2: 13240 to 13734 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
377.3 bits(817) | 0.0 | 161/165(98%) | 0/165(0%) | Minus/Minus |
Query 1 SGRLVFVRLDIVYNASVICGVDRISHLRSYTISRVIR*RTVYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLDFSLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLLGDLRAYLSPFTCRHL 495 SG LVFVRLDIVYNASVICGVDRISHLRSYTISRVIR*RTVYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLD SLYPHIEEIRASFNPGS+ AVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLLGDLRAYLSPFTCRHL Subject 13240 SGNLVFVRLDIVYNASVICGVDRISHLRSYTISRVIR*RTVYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLDSSLYPHIEEIRASFNPGSISAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLLGDLRAYLSPFTCRHL 13734
Range 3: 13241 to 13732 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
377.3 bits(817) | 0.0 | 161/164(98%) | 0/164(0%) | Minus/Minus |
Query 2 RSPGFRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTYRLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTSRRSPGISFPLYLSSS 493 R PGFRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTYRLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW* CRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTSRRSPGISFPLYLSSS Subject 13241 R*PGFRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTYRLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*H*CRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTSRRSPGISFPLYLSSS 13732
Range 4: 13242 to 13748 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
376.8 bits(816) | 0.0 | 162/169(96%) | 0/169(0%) | Plus/Plus |
Query 3 DDDR*RGKDMPGDRREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRRYVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERKPGDRTTKHT 509 DDDR*RGKDMPGDRREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRH YQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRRYVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERKPG R T Subject 13242 DDDR*RGKDMPGDRREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRH*CYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRRYVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERKPGYRNYSTT 13748
Range 5: 13242 to 13733 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
352.5 bits(763) | 0.0 | 161/164(98%) | 0/164(0%) | Minus/Minus |
Query 3 PVAWFSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTFPFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVI 494 PV WFSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFST PFILTLRKSGRLLILVA VP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVI Subject 13242 PVTWFSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTLPFILTLRKSGRLLILVALVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVI 13733
Range 6: 13241 to 13633 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
289.3 bits(625) | 0.0 | 128/131(98%) | 0/131(0%) | Plus/Plus |
Query 2 R*RQVKGERYARRSPRSWCAV*WRKTIS*D*PQ*WP**LYWYTTPFTAQTLPGLKDARISSM*G*REKSRRFRYGG*KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIGRR*VM*TVR*RMT 394 R*RQVKGERYARRSPRSWCAV*WRKTIS*D*PQ*WP**LYWYTTPFTA LPGLKDARISSM*G*RE+SRRFRYGG*KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIGRR*VM*TVR*RMT Subject 13241 R*RQVKGERYARRSPRSWCAV*WRKTIS*D*PQ*WP**LYWYTTPFTALMLPGLKDARISSM*G*REESRRFRYGG*KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIGRR*VM*TVR*RMT 13633
Grapevine leafroll associated virus 3 isolate WA MR, complete genome
Sequence ID: GU983863.1 Length: 18498 Number of Matches: 7
Range 1: 13240 to 13734 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
391.0 bits(847) | 0.0 | 163/165(99%) | 0/165(0%) | Plus/Plus |
Query 1 EMTTGKGGKICPEIAEKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGKVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNENQATG 495 EMTTGKGGKICPEIAEKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKG+VEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNENQ TG Subject 13240 EMTTGKGGKICPEIAEKLVRRLMEENYKLRLTPVMALIIILVYYSIYGTNATRIKRRPDFLNVRIKGRVEKVSLRGVEDRAFRISEKRGINAQRVLCRYYSDLTCLARRHYGIRRNNWKTLSYVDGTLAYDTADCITSKVRNTINTADHASIIHYIKTNENQVTG 13734
Range 2: 13242 to 13748 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
384.6 bits(833) | 0.0 | 164/169(97%) | 0/169(0%) | Plus/Plus |
Query 3 DDDR*RGKDMPGDRREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRRYVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERKPGDRTTKHT 509 DDDR*RGKDMPGDRREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRRYVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERKPG R T Subject 13242 DDDR*RGKDMPGDRREVGAPSNGGKL*VKIDPSDGLNNYTGILLHLRHKRYQD*KTPGFPQCEDKGKSREGFVTGGRRSCL*NIRKARDKRSTCIM*VL*RSHMSG*ATLRHSQEQLEDAELCRRYVSV*HG*LYNF*GEKYDQHRRSR*HYTLYQDERKPGYRNYSTT 13748
Range 3: 13241 to 13732 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
383.2 bits(830) | 0.0 | 163/164(99%) | 0/164(0%) | Minus/Minus |
Query 2 RSPGFRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTYRLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTSRRSPGISFPLYLSSS 493 R PGFRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTYRLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTSRRSPGISFPLYLSSS Subject 13241 R*PGFRSS*YSV*C*RDLRC*SYFSP*KLYNQPCHTLTYRLHNSASSNCSCECRNVA*PDM*DRYSTYIIHVERLSRAFLIF*RHDLLPPVTKPSRLFPLSSH*GNPGVF*SW*RLCRKWSSIPV*LLRPSLGSILTYSFPPLDGAPTSRRSPGISFPLYLSSS 13732
Range 4: 13240 to 13734 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
382.3 bits(828) | 0.0 | 163/165(99%) | 0/165(0%) | Minus/Minus |
Query 1 SGRLVFVRLDIVYNASVICGVDRISHLRSYTISRVIR*RTVYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLDFSLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLLGDLRAYLSPFTCRHL 495 SG LVFVRLDIVYNASVICGVDRISHLRSYTISRVIR*RTVYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLD SLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLLGDLRAYLSPFTCRHL Subject 13240 SGNLVFVRLDIVYNASVICGVDRISHLRSYTISRVIR*RTVYITQRLPIVPANAVMSPSQTCEIAIVPT*YTLSVYPALF*YSKGTIFYPP*RNLLDSSLYPHIEEIRASFNPGSVCAVNGVVYQYNY*GHHWGQS*LIVFLH*TAHQLLGDLRAYLSPFTCRHL 13734
Range 5: 13242 to 13733 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
355.3 bits(769) | 0.0 | 162/164(99%) | 0/164(0%) | Minus/Minus |
Query 3 PVAWFSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTFPFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVI 494 PV WFSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFST PFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVI Subject 13242 PVTWFSFVLI*CIMLA*SAVLIVFLTLEVIQSAVSYANVPST*LSVFQLFLRMP*CRLARHVRSL*YLHNTR*AFIPRFSDILKARSSTPRNETFSTLPFILTLRKSGRLLILVAFVP*ME*YTSIIIKAITGVNLNL*FSSIRRRTNFSAISGHIFPPLPVVI 13733
Range 6: 13241 to 13633 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
295.2 bits(638) | 0.0 | 130/131(99%) | 0/131(0%) | Plus/Plus |
Query 2 R*RQVKGERYARRSPRSWCAV*WRKTIS*D*PQ*WP**LYWYTTPFTAQTLPGLKDARISSM*G*REKSRRFRYGG*KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIGRR*VM*TVR*RMT 394 R*RQVKGERYARRSPRSWCAV*WRKTIS*D*PQ*WP**LYWYTTPFTAQTLPGLKDARISSM*G*RE+SRRFRYGG*KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIGRR*VM*TVR*RMT Subject 13241 R*RQVKGERYARRSPRSWCAV*WRKTIS*D*PQ*WP**LYWYTTPFTAQTLPGLKDARISSM*G*REESRRFRYGG*KIVPLEYQKSAG*TLNVYYVGTIAISHVWLGDITAFAGTIGRR*VM*TVR*RMT 13633
Nucleotide Sequence (2006 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
1592.0 | 8733.7 | 44% | 0 | 96% | JX559645.1 | |
1592.0 | 8717.2 | 44% | 0 | 98% | GQ352631.1 | |
1592.0 | 8731.0 | 44% | 0 | 98% | KX756669.1 | |
1590.6 | 8733.3 | 44% | 0 | 95% | GU983863.1 | |
1583.3 | 8692.5 | 44% | 0 | 98% | EU344893.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 17
Range 1: 5478 to 7481 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1592.0 bits(3468) | 0.0 | 667/668(100%) | 0/668(0%) | Plus/Plus |
Query 2 VSSGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGVTRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPYVFIAEKGIFTKGKDVDAVVALGDNLFVCDDILVFHDAINLIGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGLNSATTVNSRVVNFIVRGMYKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALSSKLDDKVGTYISDASPQSVSDALLHTFAPAGCFRGI*AYEFWTDLRR 2005 VSSGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQG TRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPYVFIAEKGIFTKGKDVDAVVALGDNLFVCDDILVFHDAINLIGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGLNSATTVNSRVVNFIVRGMYKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALSSKLDDKVGTYISDASPQSVSDALLHTFAPAGCFRGI*AYEFWTDLRR Subject 5478 VSSGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPYVFIAEKGIFTKGKDVDAVVALGDNLFVCDDILVFHDAINLIGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGLNSATTVNSRVVNFIVRGMYKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALSSKLDDKVGTYISDASPQSVSDALLHTFAPAGCFRGI*AYEFWTDLRR 7481
Range 2: 5478 to 7481 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1554.4 bits(3386) | 0.0 | 661/668(99%) | 0/668(0%) | Minus/Minus |
Query 2 PSKVGPKFIRSYTSKATSRGERVKQSVGY*LR*RVANICADLIVQL*AQSGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQXXXXXXXXXXXXXSNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFIHSPDDKVYHPGVNCGSTVETFQIRISLLHRHIYVLRTSHISRNGGCAIG*LNEFVH*HRRLTATWGSIIALIFEGLKRFAHHAASSDFQCTYQINGIVENQYIVAYEQIVAQSYHRVDIFALSKDTFFSYEYVR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDGYISSHKQRPVRPLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRFWCDCSGNTLALWLLVWNTW*FLIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTRPP**N 2005 PSKVGPKFIRSYTSKATSRGERVKQSVGY*LR*RVANICADLIVQL*AQSGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVSVYFSYVIS SNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFIHSPDDKVYHPGVNCGSTVETFQIRISLLHRHIYVLRTSHISRNGGCAIG*LNEFVH*HRRLTATWGSIIALIFEGLKRFAHHAASSDFQCTYQINGIVENQYIVAYEQIVAQSYHRVDIFALSKDTFFSYEYVR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDG ISSHKQRPV PLNAYSQILQVLHDGIFRGPGFNHFKCHWG+VRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAP FWCDCSG+TLALWLLVWNTW* LIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTRPP**N Subject 5478 PSKVGPKFIRSYTSKATSRGERVKQSVGY*LR*RVANICADLIVQL*AQSGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVSVYFSYVISGSNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFIHSPDDKVYHPGVNCGSTVETFQIRISLLHRHIYVLRTSHISRNGGCAIG*LNEFVH*HRRLTATWGSIIALIFEGLKRFAHHAASSDFQCTYQINGIVENQYIVAYEQIVAQSYHRVDIFALSKDTFFSYEYVR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDGNISSHKQRPVCPLNAYSQILQVLHDGIFRGPGFNHFKCHWGIVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAP*FWCDCSGSTLALWLLVWNTW*LLIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTRPP**N 7481
Range 3: 5477 to 7021 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1170.0 bits(2547) | 0.0 | 514/515(100%) | 0/515(0%) | Minus/Minus |
Query 1 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLYIPLTIKFTTLELTVVALLRPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTNIVVLPPPGGAL*HLYSKDLNDSPTMPHRATFSAPIKLMASWKTSISSHTNRLSPKATTASTSLPLVKIPFSAMNTYGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDXXXXXXXXXSDRALPPDFGVIVLVTPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDET 1545 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLYIPLTIKFTTLELTVVALLRPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTNIVVLPPPGGAL*HLYSKDLNDSPTMPHRATFSAPIKLMASWKTSISSHTNRLSPKATTASTSLPLVKIPFSAMNTYGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLV PWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDET Subject 5477 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLYIPLTIKFTTLELTVVALLRPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTNIVVLPPPGGAL*HLYSKDLNDSPTMPHRATFSAPIKLMASWKTSISSHTNRLSPKATTASTSLPLVKIPFSAMNTYGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDET 7021
Range 4: 5479 to 6639 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
883.1 bits(1921) | 0.0 | 382/387(99%) | 0/387(0%) | Plus/Plus |
Query 3 FHQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRNHQVFQTSNHRAKVLPEQSHQNRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRGRTGRCLWLEI*PSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRTYS*LKKVSLLRAKMSTRW*LWATICSYATIYWFSTMPLI**VH*KSLDAAWWANRLSPSNISAIMLPQVAVRRRC*WTNSLSHPIAQPPLRLMWEVL 1163 FHQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMR+HQVFQTSNHRAKVLPEQSHQN+GARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLT PQ*HLKWLKPGPLKMPSWST*SIWL*ALRG TGRCLWLEI PSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRTYS*LKKVSLLRAKMSTRW*LWATICSYATIYWFSTMPLI**VH*KSLDAAWWANRLSPSNISAIMLPQVAVRRRC*WTNSLSHPIAQPPLRLMWEVL Subject 5479 FHQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRSHQVFQTSNHRAKVLPEQSHQNQGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTIPQ*HLKWLKPGPLKMPSWST*SIWL*ALRGHTGRCLWLEILPSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRTYS*LKKVSLLRAKMSTRW*LWATICSYATIYWFSTMPLI**VH*KSLDAAWWANRLSPSNISAIMLPQVAVRRRC*WTNSLSHPIAQPPLRLMWEVL 6639
Range 5: 5674 to 6369 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
509.2 bits(1105) | 0.0 | 227/232(98%) | 0/232(0%) | Minus/Minus |
Query 198 YLFQL*IRTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**RLYF*P*ATPCTSSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLVISHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT 893 YLFQL*IRTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**R YF*P*ATPC SSQCL*PDTSSTPRRHLQRSRF*PLQMSLG SQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCP ILV*LFW*HLGSVVAGLEHLV SHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT Subject 5674 YLFQL*IRTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**RQYF*P*ATPCMSSQCL*PDTSSTPRRHLQRSRF*PLQMSLGYSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPLILV*LFW*HLGSVVAGLEHLVTSHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT 6369
Range 6: 6836 to 7480 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
459.7 bits(997) | 0.0 | 214/215(100%) | 0/215(0%) | Plus/Plus |
Query 1360 FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWNY**RS*NKR*RVLVHDPXXXXXXXXXXXXKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRSELKVGR*GRHIY*RRVTSISIRRFASHVRPGWLLSRYMSV*ILDRPSK 2004 FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWN+**RS*NKR*RVLVHDPVGEVGYEEVVEGKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRSELKVGR*GRHIY*RRVTSISIRRFASHVRPGWLLSRYMSV*ILDRPSK Subject 6836 FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWNH**RS*NKR*RVLVHDPVGEVGYEEVVEGKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRSELKVGR*GRHIY*RRVTSISIRRFASHVRPGWLLSRYMSV*ILDRPSK 7480
Range 7: 5477 to 5935 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
364.0 bits(788) | 0.0 | 152/153(99%) | 0/153(0%) | Plus/Plus |
Query 1 CFIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EITRCSKPATTEPRCYQNNHT 459 CFIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*E+TRCSKPATTEPRCYQNNHT Subject 5477 CFIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EVTRCSKPATTEPRCYQNNHT 5935
Range 8: 6281 to 6736 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
332.4 bits(719) | 0.0 | 152/152(100%) | 0/152(0%) | Plus/Plus |
Query 805 QVGHRSHFSFNTRRLACERPTVRIHS*KRYLY*GQRCRRGGSFGRQSVRMRRYTGFPRCH*FDRCTESRSMRHGGRIV*VLRI*VL*CSPRWR*DDDVSGRIR*VTQ*HSHHYG*CGKF*GHKYXXXXXXXXXXXXQQCYHS*LQGGKLYRQ 1260 QVGHRSHFSFNTRRLACERPTVRIHS*KRYLY*GQRCRRGGSFGRQSVRMRRYTGFPRCH*FDRCTESRSMRHGGRIV*VLRI*VL*CSPRWR*DDDVSGRIR*VTQ*HSHHYG*CGKF*GHKYGGEEERSEFGRSQQCYHS*LQGGKLYRQ Subject 6281 QVGHRSHFSFNTRRLACERPTVRIHS*KRYLY*GQRCRRGGSFGRQSVRMRRYTGFPRCH*FDRCTESRSMRHGGRIV*VLRI*VL*CSPRWR*DDDVSGRIR*VTQ*HSHHYG*CGKF*GHKYGGEEERSEFGRSQQCYHS*LQGGKLYRQ 6736
Range 9: 7073 to 7480 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
320.0 bits(692) | 0.0 | 136/136(100%) | 0/136(0%) | Minus/Minus |
Query 1597 LRRSVQNSYAHIPRKQPAGANV*SKASDTD*GDASLIYVPTLSSNFELRAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI 2004 LRRSVQNSYAHIPRKQPAGANV*SKASDTD*GDASLIYVPTLSSNFELRAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI Subject 7073 LRRSVQNSYAHIPRKQPAGANV*SKASDTD*GDASLIYVPTLSSNFELRAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI 7480
Range 10: 6679 to 7074 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
315.4 bits(682) | 0.0 | 132/132(100%) | 0/132(0%) | Plus/Plus |
Query 1203 WKVSTVLPQLTPGW*TLSSGECIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQ 1598 WKVSTVLPQLTPGW*TLSSGECIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQ Subject 6679 WKVSTVLPQLTPGW*TLSSGECIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQ 7074
Range 11: 6691 to 7065 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
276.0 bits(596) | 0.0 | 125/125(100%) | 0/125(0%) | Minus/Minus |
Query 1215 WTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTXXXXXXXXXXXLDASCTPHPPKPFYTFP*R*SLPPWS*LW*HC 1589 WTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLDASCTPHPPKPFYTFP*R*SLPPWS*LW*HC Subject 6691 WTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLDASCTPHPPKPFYTFP*R*SLPPWS*LW*HC 7065
Range 12: 7168 to 7482 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
267.3 bits(577) | 0.0 | 105/105(100%) | 0/105(0%) | Plus/Plus |
Query 1692 EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL*AQSWTIRSAHILATRHLNQYPTLCFTRSPRLVAFEVYERMNFGPTFEG 2006 EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL*AQSWTIRSAHILATRHLNQYPTLCFTRSPRLVAFEVYERMNFGPTFEG Subject 7168 EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL*AQSWTIRSAHILATRHLNQYPTLCFTRSPRLVAFEVYERMNFGPTFEG 7482
Range 13: 7198 to 7482 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
225.1 bits(485) | 0.0 | 95/95(100%) | 0/95(0%) | Minus/Minus |
Query 1722 PFEGRSKIHTLIYLESNQPGRTCEAKRRILIEVTRR*YMCRPYRPTLSSERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA 2006 PFEGRSKIHTLIYLESNQPGRTCEAKRRILIEVTRR*YMCRPYRPTLSSERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA Subject 7198 PFEGRSKIHTLIYLESNQPGRTCEAKRRILIEVTRR*YMCRPYRPTLSSERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA 7482
Range 14: 5987 to 6229 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
171.5 bits(368) | 0.0 | 78/81(96%) | 0/81(0%) | Plus/Plus |
Query 511 EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*EDVQGVAYG*KYSRHYRRRC 753 EVDILDMVRTRLR*EV*VAQG**SSDGS*T*L+PNDI*SG*NRDL*RCRRGVLEVSGYRH*ED+QGVAYG*KY RHYRRRC Subject 5987 EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LYPNDI*SG*NRDL*RCRRGVLEVSGYRH*EDIQGVAYG*KYCRHYRRRC 6229
Range 15: 5479 to 5628 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
124.3 bits(265) | 0.0 | 50/50(100%) | 0/50(0%) | Minus/Minus |
Query 3 GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLMK 152 GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLMK Subject 5479 GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLMK 5628
Grapevine leafroll associated virus 3 isolate 621, complete genome
Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 17
Range 1: 5478 to 7481 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1592.0 bits(3468) | 0.0 | 667/668(100%) | 0/668(0%) | Plus/Plus |
Query 2 VSSGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGVTRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPYVFIAEKGIFTKGKDVDAVVALGDNLFVCDDILVFHDAINLIGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGLNSATTVNSRVVNFIVRGMYKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALSSKLDDKVGTYISDASPQSVSDALLHTFAPAGCFRGI*AYEFWTDLRR 2005 VSSGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQG TRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPYVFIAEKGIFTKGKDVDAVVALGDNLFVCDDILVFHDAINLIGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGLNSATTVNSRVVNFIVRGMYKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALSSKLDDKVGTYISDASPQSVSDALLHTFAPAGCFRGI*AYEFWTDLRR Subject 5478 VSSGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPYVFIAEKGIFTKGKDVDAVVALGDNLFVCDDILVFHDAINLIGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGLNSATTVNSRVVNFIVRGMYKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALSSKLDDKVGTYISDASPQSVSDALLHTFAPAGCFRGI*AYEFWTDLRR 7481
Range 2: 5478 to 7481 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1548.9 bits(3374) | 0.0 | 659/668(99%) | 0/668(0%) | Minus/Minus |
Query 2 PSKVGPKFIRSYTSKATSRGERVKQSVGY*LR*RVANICADLIVQL*AQSGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQXXXXXXXXXXXXXSNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFIHSPDDKVYHPGVNCGSTVETFQIRISLLHRHIYVLRTSHISRNGGCAIG*LNEFVH*HRRLTATWGSIIALIFEGLKRFAHHAASSDFQCTYQINGIVENQYIVAYEQIVAQSYHRVDIFALSKDTFFSYEYVR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDGYISSHKQRPVRPLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRFWCDCSGNTLALWLLVWNTW*FLIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTRPP**N 2005 PSKVGPKFIRSYTSKATSRG+RVKQSVGY*LR*RVANICADLIVQL*AQSGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVSVYFSYVIS SNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFIHSPDDKVYHPGVNCGSTVETFQIRISLLHRHIYVLRTSHISRNGGCAIG*LNEFVH HRRLTATWGSIIALIFEGLKRFAHHAASSDFQCTYQINGIVENQYIVAYEQIVAQSYHRVDIF LSKDTFFSYEYVR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDG ISSHKQRPV PLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAP FWCDCSG+TLALWLLVWNTW* LIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTRPP**N Subject 5478 PSKVGPKFIRSYTSKATSRGKRVKQSVGY*LR*RVANICADLIVQL*AQSGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVSVYFSYVISGSNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFIHSPDDKVYHPGVNCGSTVETFQIRISLLHRHIYVLRTSHISRNGGCAIG*LNEFVHQHRRLTATWGSIIALIFEGLKRFAHHAASSDFQCTYQINGIVENQYIVAYEQIVAQSYHRVDIFTLSKDTFFSYEYVR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDGNISSHKQRPVCPLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAP*FWCDCSGSTLALWLLVWNTW*LLIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTRPP**N 7481
Range 3: 5477 to 7021 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1170.0 bits(2547) | 0.0 | 514/515(100%) | 0/515(0%) | Minus/Minus |
Query 1 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLYIPLTIKFTTLELTVVALLRPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTNIVVLPPPGGAL*HLYSKDLNDSPTMPHRATFSAPIKLMASWKTSISSHTNRLSPKATTASTSLPLVKIPFSAMNTYGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDXXXXXXXXXSDRALPPDFGVIVLVTPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDET 1545 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLYIPLTIKFTTLELTVVALLRPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTNIVVLPPPGGAL*HLYSKDLNDSPTMPHRATFSAPIKLMASWKTSISSHTNRLSPKATTASTSLPLVKIPFSAMNTYGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLV PWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDET Subject 5477 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLYIPLTIKFTTLELTVVALLRPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTNIVVLPPPGGAL*HLYSKDLNDSPTMPHRATFSAPIKLMASWKTSISSHTNRLSPKATTASTSLPLVKIPFSAMNTYGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDET 7021
Range 4: 5479 to 6639 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
881.7 bits(1918) | 0.0 | 381/387(98%) | 0/387(0%) | Plus/Plus |
Query 3 FHQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRNHQVFQTSNHRAKVLPEQSHQNRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRGRTGRCLWLEI*PSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRTYS*LKKVSLLRAKMSTRW*LWATICSYATIYWFSTMPLI**VH*KSLDAAWWANRLSPSNISAIMLPQVAVRRRC*WTNSLSHPIAQPPLRLMWEVL 1163 FHQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMR+HQVFQTSNHRAKVLPEQSHQN+GARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRG TGRCLWLEI PSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRTYS*LKKVSLLR KMSTRW*LWATICSYATIYWFSTMPLI**VH*KSLDAAWWANRLSPSNISAIMLPQVAVRRRC WTNSLSHPIAQPPLRLMWEVL Subject 5479 FHQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRSHQVFQTSNHRAKVLPEQSHQNQGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRGHTGRCLWLEILPSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRTYS*LKKVSLLRVKMSTRW*LWATICSYATIYWFSTMPLI**VH*KSLDAAWWANRLSPSNISAIMLPQVAVRRRCWWTNSLSHPIAQPPLRLMWEVL 6639
Range 5: 5674 to 6369 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
514.3 bits(1116) | 0.0 | 228/232(98%) | 0/232(0%) | Minus/Minus |
Query 198 YLFQL*IRTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**RLYF*P*ATPCTSSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLVISHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT 893 YLFQL*IRTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**R YF*P*ATPC SSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCP ILV*LFW*HLGSVVAGLEHLV SHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT Subject 5674 YLFQL*IRTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**RQYF*P*ATPCMSSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPLILV*LFW*HLGSVVAGLEHLVTSHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT 6369
Range 6: 6836 to 7480 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
456.1 bits(989) | 0.0 | 213/215(99%) | 0/215(0%) | Plus/Plus |
Query 1360 FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWNY**RS*NKR*RVLVHDPXXXXXXXXXXXXKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRSELKVGR*GRHIY*RRVTSISIRRFASHVRPGWLLSRYMSV*ILDRPSK 2004 FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWN+**RS*NKR*RVLVHDPVGEVGYEEVVEGKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRSELKVGR*GRHIY*RRVTSISIRRFASHV PGWLLSRYMSV*ILDRPSK Subject 6836 FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWNH**RS*NKR*RVLVHDPVGEVGYEEVVEGKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRSELKVGR*GRHIY*RRVTSISIRRFASHVCPGWLLSRYMSV*ILDRPSK 7480
Range 7: 5477 to 5935 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
364.0 bits(788) | 0.0 | 152/153(99%) | 0/153(0%) | Plus/Plus |
Query 1 CFIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EITRCSKPATTEPRCYQNNHT 459 CFIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*E+TRCSKPATTEPRCYQNNHT Subject 5477 CFIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EVTRCSKPATTEPRCYQNNHT 5935
Range 8: 6281 to 6736 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
326.4 bits(706) | 0.0 | 150/152(99%) | 0/152(0%) | Plus/Plus |
Query 805 QVGHRSHFSFNTRRLACERPTVRIHS*KRYLY*GQRCRRGGSFGRQSVRMRRYTGFPRCH*FDRCTESRSMRHGGRIV*VLRI*VL*CSPRWR*DDDVSGRIR*VTQ*HSHHYG*CGKF*GHKYXXXXXXXXXXXXQQCYHS*LQGGKLYRQ 1260 QVGHRSHFSFNTRRLACERPTVRIHS*KRYLY*G RCRRGGSFGRQSVRMRRYTGFPRCH*FDRCTESRSMRHGGRIV*VLRI*VL*CSPRWR*DDDV GRIR*VTQ*HSHHYG*CGKF*GHKYGGEEERSEFGRSQQCYHS*LQGGKLYRQ Subject 6281 QVGHRSHFSFNTRRLACERPTVRIHS*KRYLY*G*RCRRGGSFGRQSVRMRRYTGFPRCH*FDRCTESRSMRHGGRIV*VLRI*VL*CSPRWR*DDDVGGRIR*VTQ*HSHHYG*CGKF*GHKYGGEEERSEFGRSQQCYHS*LQGGKLYRQ 6736
Range 9: 7073 to 7480 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
320.0 bits(692) | 0.0 | 136/136(100%) | 0/136(0%) | Minus/Minus |
Query 1597 LRRSVQNSYAHIPRKQPAGANV*SKASDTD*GDASLIYVPTLSSNFELRAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI 2004 LRRSVQNSYAHIPRKQPAGANV*SKASDTD*GDASLIYVPTLSSNFELRAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI Subject 7073 LRRSVQNSYAHIPRKQPAGANV*SKASDTD*GDASLIYVPTLSSNFELRAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI 7480
Range 10: 6679 to 7074 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
315.4 bits(682) | 0.0 | 132/132(100%) | 0/132(0%) | Plus/Plus |
Query 1203 WKVSTVLPQLTPGW*TLSSGECIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQ 1598 WKVSTVLPQLTPGW*TLSSGECIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQ Subject 6679 WKVSTVLPQLTPGW*TLSSGECIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQ 7074
Range 11: 6691 to 7065 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
276.0 bits(596) | 0.0 | 125/125(100%) | 0/125(0%) | Minus/Minus |
Query 1215 WTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTXXXXXXXXXXXLDASCTPHPPKPFYTFP*R*SLPPWS*LW*HC 1589 WTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLDASCTPHPPKPFYTFP*R*SLPPWS*LW*HC Subject 6691 WTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLDASCTPHPPKPFYTFP*R*SLPPWS*LW*HC 7065
Range 12: 7168 to 7482 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
264.5 bits(571) | 0.0 | 104/105(99%) | 0/105(0%) | Plus/Plus |
Query 1692 EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL*AQSWTIRSAHILATRHLNQYPTLCFTRSPRLVAFEVYERMNFGPTFEG 2006 EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL*AQSWTIRSAHILATRHLNQYPTLCFTR PRLVAFEVYERMNFGPTFEG Subject 7168 EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL*AQSWTIRSAHILATRHLNQYPTLCFTRLPRLVAFEVYERMNFGPTFEG 7482
Range 13: 7198 to 7482 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
223.3 bits(481) | 0.0 | 94/95(99%) | 0/95(0%) | Minus/Minus |
Query 1722 PFEGRSKIHTLIYLESNQPGRTCEAKRRILIEVTRR*YMCRPYRPTLSSERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA 2006 PFEGRSKIHTLIYLESNQPG+TCEAKRRILIEVTRR*YMCRPYRPTLSSERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA Subject 7198 PFEGRSKIHTLIYLESNQPGQTCEAKRRILIEVTRR*YMCRPYRPTLSSERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA 7482
Range 14: 5987 to 6229 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
174.3 bits(374) | 0.0 | 79/81(98%) | 0/81(0%) | Plus/Plus |
Query 511 EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*EDVQGVAYG*KYSRHYRRRC 753 EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*ED+QGVAYG*KY RHYRRRC Subject 5987 EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*EDIQGVAYG*KYCRHYRRRC 6229
Range 15: 5479 to 5628 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
124.3 bits(265) | 0.0 | 50/50(100%) | 0/50(0%) | Minus/Minus |
Query 3 GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLMK 152 GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLMK Subject 5479 GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLMK 5628
Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome
Sequence ID: KX756669.1 Length: 18313 Number of Matches: 17
Range 1: 5293 to 7296 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1592.0 bits(3468) | 0.0 | 667/668(100%) | 0/668(0%) | Plus/Plus |
Query 2 VSSGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGVTRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPYVFIAEKGIFTKGKDVDAVVALGDNLFVCDDILVFHDAINLIGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGLNSATTVNSRVVNFIVRGMYKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALSSKLDDKVGTYISDASPQSVSDALLHTFAPAGCFRGI*AYEFWTDLRR 2005 VSSGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQG TRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPYVFIAEKGIFTKGKDVDAVVALGDNLFVCDDILVFHDAINLIGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGLNSATTVNSRVVNFIVRGMYKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALSSKLDDKVGTYISDASPQSVSDALLHTFAPAGCFRGI*AYEFWTDLRR Subject 5293 VSSGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPYVFIAEKGIFTKGKDVDAVVALGDNLFVCDDILVFHDAINLIGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGLNSATTVNSRVVNFIVRGMYKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALSSKLDDKVGTYISDASPQSVSDALLHTFAPAGCFRGI*AYEFWTDLRR 7296
Range 2: 5293 to 7296 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1553.5 bits(3384) | 0.0 | 660/668(99%) | 0/668(0%) | Minus/Minus |
Query 2 PSKVGPKFIRSYTSKATSRGERVKQSVGY*LR*RVANICADLIVQL*AQSGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQXXXXXXXXXXXXXSNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFIHSPDDKVYHPGVNCGSTVETFQIRISLLHRHIYVLRTSHISRNGGCAIG*LNEFVH*HRRLTATWGSIIALIFEGLKRFAHHAASSDFQCTYQINGIVENQYIVAYEQIVAQSYHRVDIFALSKDTFFSYEYVR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDGYISSHKQRPVRPLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRFWCDCSGNTLALWLLVWNTW*FLIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTRPP**N 2005 PSKVGPKFIRSYTSKATSRGERVKQSVGY*LR*RVANICADLIVQL*AQSGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVSVYFSYVIS SNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVA+I*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRA CEDA*L**ALMHHVHLIHQNPFIHSPDDKVYHPGVNCGSTVETFQIRISLLHRHIYVLRTSHISRNGGCAIG*LNEFVH*HRRLTATWGSIIALIFEGLKRFAHHAASSDFQCTYQINGIVENQYIVAYEQIVAQSYHRVDIFALSKDTFFSYEYVR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDG ISSHKQRPV PLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRFWCDCSG+TLALWLLVWNTW* LIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDR+I*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTRPP**N Subject 5293 PSKVGPKFIRSYTSKATSRGERVKQSVGY*LR*RVANICADLIVQL*AQSGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVSVYFSYVISGSNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVADI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRASCEDA*L**ALMHHVHLIHQNPFIHSPDDKVYHPGVNCGSTVETFQIRISLLHRHIYVLRTSHISRNGGCAIG*LNEFVH*HRRLTATWGSIIALIFEGLKRFAHHAASSDFQCTYQINGIVENQYIVAYEQIVAQSYHRVDIFALSKDTFFSYEYVR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDGNISSHKQRPVCPLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRFWCDCSGSTLALWLLVWNTW*LLIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRII*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTRPP**N 7296
Range 3: 5292 to 6836 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1170.0 bits(2547) | 0.0 | 514/515(100%) | 0/515(0%) | Minus/Minus |
Query 1 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLYIPLTIKFTTLELTVVALLRPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTNIVVLPPPGGAL*HLYSKDLNDSPTMPHRATFSAPIKLMASWKTSISSHTNRLSPKATTASTSLPLVKIPFSAMNTYGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDXXXXXXXXXSDRALPPDFGVIVLVTPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDET 1545 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLYIPLTIKFTTLELTVVALLRPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTNIVVLPPPGGAL*HLYSKDLNDSPTMPHRATFSAPIKLMASWKTSISSHTNRLSPKATTASTSLPLVKIPFSAMNTYGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLV PWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDET Subject 5292 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLYIPLTIKFTTLELTVVALLRPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTNIVVLPPPGGAL*HLYSKDLNDSPTMPHRATFSAPIKLMASWKTSISSHTNRLSPKATTASTSLPLVKIPFSAMNTYGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDET 6836
Range 4: 5294 to 6454 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
885.0 bits(1925) | 0.0 | 383/387(99%) | 0/387(0%) | Plus/Plus |
Query 3 FHQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRNHQVFQTSNHRAKVLPEQSHQNRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRGRTGRCLWLEI*PSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRTYS*LKKVSLLRAKMSTRW*LWATICSYATIYWFSTMPLI**VH*KSLDAAWWANRLSPSNISAIMLPQVAVRRRC*WTNSLSHPIAQPPLRLMWEVL 1163 FHQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQI LS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMR+HQVFQTSNHRAKVLPEQSHQNRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRG TGRCLWLEI PSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRTYS*LKKVSLLRAKMSTRW*LWATICSYATIYWFSTMPLI**VH*KSLDAAWWANRLSPSNISAIMLPQVAVRRRC*WTNSLSHPIAQPPLRLMWEVL Subject 5294 FHQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQIILS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRSHQVFQTSNHRAKVLPEQSHQNRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRGHTGRCLWLEILPSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRTYS*LKKVSLLRAKMSTRW*LWATICSYATIYWFSTMPLI**VH*KSLDAAWWANRLSPSNISAIMLPQVAVRRRC*WTNSLSHPIAQPPLRLMWEVL 6454
Range 5: 5489 to 6184 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
518.8 bits(1126) | 0.0 | 229/232(99%) | 0/232(0%) | Minus/Minus |
Query 198 YLFQL*IRTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**RLYF*P*ATPCTSSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLVISHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT 893 YLFQL*IRTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**R YF*P*ATPC SSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLV SHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT Subject 5489 YLFQL*IRTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**RQYF*P*ATPCMSSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLVTSHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT 6184
Range 6: 6651 to 7295 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
459.7 bits(997) | 0.0 | 214/215(100%) | 0/215(0%) | Plus/Plus |
Query 1360 FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWNY**RS*NKR*RVLVHDPXXXXXXXXXXXXKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRSELKVGR*GRHIY*RRVTSISIRRFASHVRPGWLLSRYMSV*ILDRPSK 2004 FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWN+**RS*NKR*RVLVHDPVGEVGYEEVVEGKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRSELKVGR*GRHIY*RRVTSISIRRFASHVRPGWLLSRYMSV*ILDRPSK Subject 6651 FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWNH**RS*NKR*RVLVHDPVGEVGYEEVVEGKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRSELKVGR*GRHIY*RRVTSISIRRFASHVRPGWLLSRYMSV*ILDRPSK 7295
Range 7: 5292 to 5750 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
360.3 bits(780) | 0.0 | 151/153(99%) | 0/153(0%) | Plus/Plus |
Query 1 CFIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EITRCSKPATTEPRCYQNNHT 459 CFIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR* YLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*E+TRCSKPATTEPRCYQNNHT Subject 5292 CFIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*SYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EVTRCSKPATTEPRCYQNNHT 5750
Range 8: 6096 to 6551 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
332.4 bits(719) | 0.0 | 152/152(100%) | 0/152(0%) | Plus/Plus |
Query 805 QVGHRSHFSFNTRRLACERPTVRIHS*KRYLY*GQRCRRGGSFGRQSVRMRRYTGFPRCH*FDRCTESRSMRHGGRIV*VLRI*VL*CSPRWR*DDDVSGRIR*VTQ*HSHHYG*CGKF*GHKYXXXXXXXXXXXXQQCYHS*LQGGKLYRQ 1260 QVGHRSHFSFNTRRLACERPTVRIHS*KRYLY*GQRCRRGGSFGRQSVRMRRYTGFPRCH*FDRCTESRSMRHGGRIV*VLRI*VL*CSPRWR*DDDVSGRIR*VTQ*HSHHYG*CGKF*GHKYGGEEERSEFGRSQQCYHS*LQGGKLYRQ Subject 6096 QVGHRSHFSFNTRRLACERPTVRIHS*KRYLY*GQRCRRGGSFGRQSVRMRRYTGFPRCH*FDRCTESRSMRHGGRIV*VLRI*VL*CSPRWR*DDDVSGRIR*VTQ*HSHHYG*CGKF*GHKYGGEEERSEFGRSQQCYHS*LQGGKLYRQ 6551
Range 9: 6888 to 7295 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
320.0 bits(692) | 0.0 | 136/136(100%) | 0/136(0%) | Minus/Minus |
Query 1597 LRRSVQNSYAHIPRKQPAGANV*SKASDTD*GDASLIYVPTLSSNFELRAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI 2004 LRRSVQNSYAHIPRKQPAGANV*SKASDTD*GDASLIYVPTLSSNFELRAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI Subject 6888 LRRSVQNSYAHIPRKQPAGANV*SKASDTD*GDASLIYVPTLSSNFELRAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI 7295
Range 10: 6494 to 6889 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
307.2 bits(664) | 0.0 | 130/132(98%) | 0/132(0%) | Plus/Plus |
Query 1203 WKVSTVLPQLTPGW*TLSSGECIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQ 1598 WKVSTVLPQLTPGW*TLSSGECIKGFWWMRCT*CIKAYYN*ASSQ ARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*M ATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQ Subject 6494 WKVSTVLPQLTPGW*TLSSGECIKGFWWMRCT*CIKAYYN*ASSQLARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MSATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQ 6889
Range 11: 6506 to 6880 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
274.6 bits(593) | 0.0 | 123/125(98%) | 0/125(0%) | Minus/Minus |
Query 1215 WTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTXXXXXXXXXXXLDASCTPHPPKPFYTFP*R*SLPPWS*LW*HC 1589 WTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSS+HLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTR+LRRRLVVVSLDASCTPHPPKPFYTFP*R*SLPPWS*LW*HC Subject 6506 WTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSRHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRQLRRRLVVVSLDASCTPHPPKPFYTFP*R*SLPPWS*LW*HC 6880
Range 12: 6983 to 7297 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
267.3 bits(577) | 0.0 | 105/105(100%) | 0/105(0%) | Plus/Plus |
Query 1692 EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL*AQSWTIRSAHILATRHLNQYPTLCFTRSPRLVAFEVYERMNFGPTFEG 2006 EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL*AQSWTIRSAHILATRHLNQYPTLCFTRSPRLVAFEVYERMNFGPTFEG Subject 6983 EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL*AQSWTIRSAHILATRHLNQYPTLCFTRSPRLVAFEVYERMNFGPTFEG 7297
Range 13: 7013 to 7297 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
225.1 bits(485) | 0.0 | 95/95(100%) | 0/95(0%) | Minus/Minus |
Query 1722 PFEGRSKIHTLIYLESNQPGRTCEAKRRILIEVTRR*YMCRPYRPTLSSERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA 2006 PFEGRSKIHTLIYLESNQPGRTCEAKRRILIEVTRR*YMCRPYRPTLSSERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA Subject 7013 PFEGRSKIHTLIYLESNQPGRTCEAKRRILIEVTRR*YMCRPYRPTLSSERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA 7297
Range 14: 5802 to 6044 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
174.3 bits(374) | 0.0 | 79/81(98%) | 0/81(0%) | Plus/Plus |
Query 511 EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*EDVQGVAYG*KYSRHYRRRC 753 EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*ED+QGVAYG*KY RHYRRRC Subject 5802 EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*EDIQGVAYG*KYCRHYRRRC 6044
Range 15: 5294 to 5440 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
121.6 bits(259) | 0.0 | 49/49(100%) | 0/49(0%) | Minus/Minus |
Query 3 YLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLMK 149 YLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLMK Subject 5294 YLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLMK 5440
Grapevine leafroll associated virus 3 isolate WA MR, complete genome
Sequence ID: GU983863.1 Length: 18498 Number of Matches: 17
Range 1: 5478 to 7481 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1590.6 bits(3465) | 0.0 | 666/668(100%) | 0/668(0%) | Plus/Plus |
Query 2 VSSGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGVTRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPYVFIAEKGIFTKGKDVDAVVALGDNLFVCDDILVFHDAINLIGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGLNSATTVNSRVVNFIVRGMYKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALSSKLDDKVGTYISDASPQSVSDALLHTFAPAGCFRGI*AYEFWTDLRR 2005 VSSGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQG TRTITPKSGGKALSEGSG+EVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPYVFIAEKGIFTKGKDVDAVVALGDNLFVCDDILVFHDAINLIGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGLNSATTVNSRVVNFIVRGMYKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALSSKLDDKVGTYISDASPQSVSDALLHTFAPAGCFRGI*AYEFWTDLRR Subject 5478 VSSGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGKEVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPYVFIAEKGIFTKGKDVDAVVALGDNLFVCDDILVFHDAINLIGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGLNSATTVNSRVVNFIVRGMYKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALSSKLDDKVGTYISDASPQSVSDALLHTFAPAGCFRGI*AYEFWTDLRR 7481
Range 2: 5478 to 7481 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1550.3 bits(3377) | 0.0 | 661/668(99%) | 0/668(0%) | Minus/Minus |
Query 2 PSKVGPKFIRSYTSKATSRGERVKQSVGY*LR*RVANICADLIVQL*AQSGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQXXXXXXXXXXXXXSNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFIHSPDDKVYHPGVNCGSTVETFQIRISLLHRHIYVLRTSHISRNGGCAIG*LNEFVH*HRRLTATWGSIIALIFEGLKRFAHHAASSDFQCTYQINGIVENQYIVAYEQIVAQSYHRVDIFALSKDTFFSYEYVR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDGYISSHKQRPVRPLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRFWCDCSGNTLALWLLVWNTW*FLIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTRPP**N 2005 PSKVGPKFIRSYTSKATSRGERVKQSVGY*LR*RVANICADLIVQL*AQSGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVSVYFSYVIS SNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFIHSPDDKVYHPGVNCGSTVETFQIRISLLHRHIYVLRTSHISRNGGCAIG*LNEFVH*HRRLTATWGSIIALIFEGLKRFAHHAASSDFQCTYQINGIVENQYIVAYE IVAQSYHRVDIFALSKDTFFSYEYVR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDG ISSHKQRPV PLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDF TTSLR*SLAPRFWCDCSG+TLALWLLVWNTW* LIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTRPP**N Subject 5478 PSKVGPKFIRSYTSKATSRGERVKQSVGY*LR*RVANICADLIVQL*AQSGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVSVYFSYVISGSNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFIHSPDDKVYHPGVNCGSTVETFQIRISLLHRHIYVLRTSHISRNGGCAIG*LNEFVH*HRRLTATWGSIIALIFEGLKRFAHHAASSDFQCTYQINGIVENQYIVAYE*IVAQSYHRVDIFALSKDTFFSYEYVR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDGNISSHKQRPVCPLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFLTTSLR*SLAPRFWCDCSGSTLALWLLVWNTW*LLIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTRPP**N 7481
Range 3: 5477 to 7021 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1170.0 bits(2547) | 0.0 | 514/515(100%) | 0/515(0%) | Minus/Minus |
Query 1 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLYIPLTIKFTTLELTVVALLRPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTNIVVLPPPGGAL*HLYSKDLNDSPTMPHRATFSAPIKLMASWKTSISSHTNRLSPKATTASTSLPLVKIPFSAMNTYGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDXXXXXXXXXSDRALPPDFGVIVLVTPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDET 1545 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLYIPLTIKFTTLELTVVALLRPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTNIVVLPPPGGAL*HLYSKDLNDSPTMPHRATFSAPIKLMASWKTSISSHTNRLSPKATTASTSLPLVKIPFSAMNTYGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLV PWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDET Subject 5477 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLYIPLTIKFTTLELTVVALLRPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTNIVVLPPPGGAL*HLYSKDLNDSPTMPHRATFSAPIKLMASWKTSISSHTNRLSPKATTASTSLPLVKIPFSAMNTYGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDET 7021
Range 4: 5479 to 6639 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
879.0 bits(1912) | 0.0 | 382/387(99%) | 0/387(0%) | Plus/Plus |
Query 3 FHQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRNHQVFQTSNHRAKVLPEQSHQNRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRGRTGRCLWLEI*PSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRTYS*LKKVSLLRAKMSTRW*LWATICSYATIYWFSTMPLI**VH*KSLDAAWWANRLSPSNISAIMLPQVAVRRRC*WTNSLSHPIAQPPLRLMWEVL 1163 FHQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMR+HQVFQTSNHRAKVLPEQSHQNRGARLYLREVV KSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRG TGRCLWLEI PSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRTYS*LKKVSLLRAKMSTRW*LWATI SYATIYWFSTMPLI**VH*KSLDAAWWANRLSPSNISAIMLPQVAVRRRC*WTNSLSHPIAQPPLRLMWEVL Subject 5479 FHQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRSHQVFQTSNHRAKVLPEQSHQNRGARLYLREVVRKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRGHTGRCLWLEILPSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRTYS*LKKVSLLRAKMSTRW*LWATIYSYATIYWFSTMPLI**VH*KSLDAAWWANRLSPSNISAIMLPQVAVRRRC*WTNSLSHPIAQPPLRLMWEVL 6639
Range 5: 5674 to 6369 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
518.8 bits(1126) | 0.0 | 229/232(99%) | 0/232(0%) | Minus/Minus |
Query 198 YLFQL*IRTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**RLYF*P*ATPCTSSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLVISHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT 893 YLFQL*IRTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**R YF*P*ATPC SSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLV SHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT Subject 5674 YLFQL*IRTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**RQYF*P*ATPCMSSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLVTSHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT 6369
Range 6: 6836 to 7480 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
459.7 bits(997) | 0.0 | 214/215(100%) | 0/215(0%) | Plus/Plus |
Query 1360 FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWNY**RS*NKR*RVLVHDPXXXXXXXXXXXXKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRSELKVGR*GRHIY*RRVTSISIRRFASHVRPGWLLSRYMSV*ILDRPSK 2004 FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWN+**RS*NKR*RVLVHDPVGEVGYEEVVEGKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRSELKVGR*GRHIY*RRVTSISIRRFASHVRPGWLLSRYMSV*ILDRPSK Subject 6836 FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWNH**RS*NKR*RVLVHDPVGEVGYEEVVEGKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRSELKVGR*GRHIY*RRVTSISIRRFASHVRPGWLLSRYMSV*ILDRPSK 7480
Range 7: 5477 to 5935 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
364.0 bits(788) | 0.0 | 152/153(99%) | 0/153(0%) | Plus/Plus |
Query 1 CFIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EITRCSKPATTEPRCYQNNHT 459 CFIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*E+TRCSKPATTEPRCYQNNHT Subject 5477 CFIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EVTRCSKPATTEPRCYQNNHT 5935
Range 8: 6281 to 6736 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
331.9 bits(718) | 0.0 | 151/152(99%) | 0/152(0%) | Plus/Plus |
Query 805 QVGHRSHFSFNTRRLACERPTVRIHS*KRYLY*GQRCRRGGSFGRQSVRMRRYTGFPRCH*FDRCTESRSMRHGGRIV*VLRI*VL*CSPRWR*DDDVSGRIR*VTQ*HSHHYG*CGKF*GHKYXXXXXXXXXXXXQQCYHS*LQGGKLYRQ 1260 QVGHRSHFSFNTRRLACERPTVRIHS*KRYLY*GQRCRRGGSFGRQS+RMRRYTGFPRCH*FDRCTESRSMRHGGRIV*VLRI*VL*CSPRWR*DDDVSGRIR*VTQ*HSHHYG*CGKF*GHKYGGEEERSEFGRSQQCYHS*LQGGKLYRQ Subject 6281 QVGHRSHFSFNTRRLACERPTVRIHS*KRYLY*GQRCRRGGSFGRQSIRMRRYTGFPRCH*FDRCTESRSMRHGGRIV*VLRI*VL*CSPRWR*DDDVSGRIR*VTQ*HSHHYG*CGKF*GHKYGGEEERSEFGRSQQCYHS*LQGGKLYRQ 6736
Range 9: 7073 to 7480 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
320.0 bits(692) | 0.0 | 136/136(100%) | 0/136(0%) | Minus/Minus |
Query 1597 LRRSVQNSYAHIPRKQPAGANV*SKASDTD*GDASLIYVPTLSSNFELRAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI 2004 LRRSVQNSYAHIPRKQPAGANV*SKASDTD*GDASLIYVPTLSSNFELRAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI Subject 7073 LRRSVQNSYAHIPRKQPAGANV*SKASDTD*GDASLIYVPTLSSNFELRAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI 7480
Range 10: 6679 to 7074 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
315.4 bits(682) | 0.0 | 132/132(100%) | 0/132(0%) | Plus/Plus |
Query 1203 WKVSTVLPQLTPGW*TLSSGECIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQ 1598 WKVSTVLPQLTPGW*TLSSGECIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQ Subject 6679 WKVSTVLPQLTPGW*TLSSGECIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQ 7074
Range 11: 6691 to 7065 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
276.0 bits(596) | 0.0 | 125/125(100%) | 0/125(0%) | Minus/Minus |
Query 1215 WTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTXXXXXXXXXXXLDASCTPHPPKPFYTFP*R*SLPPWS*LW*HC 1589 WTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLDASCTPHPPKPFYTFP*R*SLPPWS*LW*HC Subject 6691 WTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLDASCTPHPPKPFYTFP*R*SLPPWS*LW*HC 7065
Range 12: 7168 to 7482 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
267.3 bits(577) | 0.0 | 105/105(100%) | 0/105(0%) | Plus/Plus |
Query 1692 EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL*AQSWTIRSAHILATRHLNQYPTLCFTRSPRLVAFEVYERMNFGPTFEG 2006 EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL*AQSWTIRSAHILATRHLNQYPTLCFTRSPRLVAFEVYERMNFGPTFEG Subject 7168 EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL*AQSWTIRSAHILATRHLNQYPTLCFTRSPRLVAFEVYERMNFGPTFEG 7482
Range 13: 7198 to 7482 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
225.1 bits(485) | 0.0 | 95/95(100%) | 0/95(0%) | Minus/Minus |
Query 1722 PFEGRSKIHTLIYLESNQPGRTCEAKRRILIEVTRR*YMCRPYRPTLSSERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA 2006 PFEGRSKIHTLIYLESNQPGRTCEAKRRILIEVTRR*YMCRPYRPTLSSERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA Subject 7198 PFEGRSKIHTLIYLESNQPGRTCEAKRRILIEVTRR*YMCRPYRPTLSSERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA 7482
Range 14: 5987 to 6229 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
174.3 bits(374) | 0.0 | 79/81(98%) | 0/81(0%) | Plus/Plus |
Query 511 EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*EDVQGVAYG*KYSRHYRRRC 753 EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*ED+QGVAYG*KY RHYRRRC Subject 5987 EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*EDIQGVAYG*KYCRHYRRRC 6229
Range 15: 5479 to 5628 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
124.3 bits(265) | 0.0 | 50/50(100%) | 0/50(0%) | Minus/Minus |
Query 3 GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLMK 152 GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLMK Subject 5479 GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLMK 5628
Grapevine leafroll associated virus 3 isolate Cl 766, complete genome
Sequence ID: EU344893.1 Length: 17919 Number of Matches: 17
Range 1: 4899 to 6902 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1583.3 bits(3449) | 0.0 | 663/668(99%) | 0/668(0%) | Plus/Plus |
Query 2 VSSGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGVTRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPYVFIAEKGIFTKGKDVDAVVALGDNLFVCDDILVFHDAINLIGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGLNSATTVNSRVVNFIVRGMYKRVLVDEVYMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALSSKLDDKVGTYISDASPQSVSDALLHTFAPAGCFRGI*AYEFWTDLRR 2005 VSSGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQG TRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPYVFIAEKGIFTKGKDVDAVVALGDNLFVCDDILVFHDAINLIGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGLNSATTVNSRVVNFIVRGMYKRVLVDEVYMMHQGLLQLGVFA GASEGLFFGDINQIPFINREKVFRMDCA FVPKKESVVYTSKSYRCPLDVCYLLSS+TVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTK ADDSLFTKQPHILVGLSRHTRSLVYAALSSKLDDKVGTYISDASPQSVSDALLHTFAPAGCFRGI*AYEFWTDLRR Subject 4899 VSSGWPRVLEDILTAIKYPSVFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSIKCRKGGKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVGRMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGREVKGRSTYSIWCEQDYVKKCEWLRADNPVMALKPDYTPMTFEVVKTGTSEDAVVEYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKSGTDLIFHSTQDGLRVRDLPYVFIAEKGIFTKGKDVDAVVALGDNLFVCDDILVFHDAINLIGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTMLVDEFVKSPNSTATITANVGSSEDINMAVKKRDPNLEGLNSATTVNSRVVNFIVRGMYKRVLVDEVYMMHQGLLQLGVFAIGASEGLFFGDINQIPFINREKVFRMDCAAFVPKKESVVYTSKSYRCPLDVCYLLSSVTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFSDVVLFRTKNADDSLFTKQPHILVGLSRHTRSLVYAALSSKLDDKVGTYISDASPQSVSDALLHTFAPAGCFRGI*AYEFWTDLRR 6902
Range 2: 4899 to 6902 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1545.2 bits(3366) | 0.0 | 658/668(99%) | 0/668(0%) | Minus/Minus |
Query 2 PSKVGPKFIRSYTSKATSRGERVKQSVGY*LR*RVANICADLIVQL*AQSGINQ*ACVSRQTNKYMRLFSE*GVIGLLRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQXXXXXXXXXXXXXSNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKNSTIHPKHLLPVYEWYLIYVSKKEAFRRAGCEDA*L**ALMHHVHLIHQNPFIHSPDDKVYHPGVNCGSTVETFQIRISLLHRHIYVLRTSHISRNGGCAIG*LNEFVH*HRRLTATWGSIIALIFEGLKRFAHHAASSDFQCTYQINGIVENQYIVAYEQIVAQSYHRVDIFALSKDTFFSYEYVR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDGYISSHKQRPVRPLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRFWCDCSGNTLALWLLVWNTW*FLIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVCLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTRPP**N 2005 PSKVGPKFIRSYTSKATSRGERVKQSVGY*LR*RVANICADLIVQL*AQSGINQ*ACVSRQTNKYMRLFSE*GVIG+LRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVSVYFSYVIS SNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNK+STIHPKHLLPVYEWYLIYVSKKEAFRRA CEDA*L**ALMHHVHLIHQNPFIHSPDDKVYHPGVNCGSTVETFQIRISLLHRHIYVLRTSHISRNGGCAIG*LNEFVH*HRRLTATWGSIIALIFEGLKRFAHHAASSDFQCTYQINGIVENQYIVAYEQIVAQSYHRVDIFAL KDTFFSYEYVR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDG ISSHKQRPV PLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRFWCDCSG+TLALWLLVWNTW* LIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREV LPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTRPP**N Subject 4899 PSKVGPKFIRSYTSKATSRGERVKQSVGY*LR*RVANICADLIVQL*AQSGINQ*ACVSRQTNKYMRLFSE*GVIGILRPKQYHITECFSLCFMHCHHWCFFSFSLQRPLHIRLLQLGHAQVHVSVYFSYVISGSNWPFGQRSYYWFILTANDLFRVTLFRSPYGH*GQQVANI*RTPV*FRSVYNAFLLWNKSSTIHPKHLLPVYEWYLIYVSKKEAFRRADCEDA*L**ALMHHVHLIHQNPFIHSPDDKVYHPGVNCGSTVETFQIRISLLHRHIYVLRTSHISRNGGCAIG*LNEFVH*HRRLTATWGSIIALIFEGLKRFAHHAASSDFQCTYQINGIVENQYIVAYEQIVAQSYHRVDIFALGKDTFFSYEYVR*VSHTQAVLC*MKNEICARLVNVKAR**FINLIRYFQNTFGGSDGNISSHKQRPVCPLNAYSQILQVLHDGIFRGPGFNHFKCHWGVVRFKSHHWIISPEPLTLLNVILFAPYRVCRPPLDFPTTSLR*SLAPRFWCDCSGSTLALWLLVWNTW*LLIRHAAG*LQHPAYTKDAPSCPERQTDAPFVDRVY*MQVRPLKTARHKKIVTRSYVYDHDLTTLPALNREVRLPHEIDRQDRVI*WIALLVISVEWYASTHLVLLH*TMVKDAWVLNCR*DIL*DTRPP**N 6902
Range 3: 4898 to 6442 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1163.5 bits(2533) | 0.0 | 510/515(99%) | 0/515(0%) | Minus/Minus |
Query 1 FSG*HFSVPLTVIEDNK*QTSNGHLYDLEVYTTLSFFGTKTAQSILNTFSLFMNGI*FMSPKKRPSDAPVAKTPSCSKP*CIMYTSSTKTLLYIPLTIKFTTLELTVVALLRPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTNIVVLPPPGGAL*HLYSKDLNDSPTMPHRATFSAPIKLMASWKTSISSHTNRLSPKATTASTSLPLVKIPFSAMNTYGRSLTRKPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDXXXXXXXXXSDRALPPDFGVIVLVTPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDET 1545 FSG*HFSVPLTV EDNK*QTSNGHLYDLEVYTTLSFFGTK AQSILNTFSLFMNGI*FMSPKKRPSDAP+AKTPSCSKP*CIMYTSSTKTLLYIPLTIKFTTLELTVVALLRPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTNIVVLPPPGGAL*HLYSKDLNDSPTMPHRATFSAPIKLMASWKTSISSHTNRLSPKATTASTSLPLVKIPFSAMNTYGRSLTR+PSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLV PWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDET Subject 4898 FSG*HFSVPLTVTEDNK*QTSNGHLYDLEVYTTLSFFGTKAAQSILNTFSLFMNGI*FMSPKKRPSDAPIAKTPSCSKP*CIMYTSSTKTLLYIPLTIKFTTLELTVVALLRPSKFGSLFFTAIFMSSELPTLAVMVAVLLGDLTNSSTNIVVLPPPGGAL*HLYSKDLNDSPTMPHRATFSAPIKLMASWKTSISSHTNRLSPKATTASTSLPLVKIPFSAMNTYGRSLTRRPSCVE*KMRSVPDL*T*KPGSDS*T*LGTFRTPSAVVTAIFLAISNALYVLSMPIARYFKYSTTASSEVPVLTTSNVIGV*SGLRAITGLSALSHSHFLT*SCSHHIEYVDLPLTSLPLPSDRALPPDFGVIVLVAPWLCGCWFGTPGDFSSDTPPANCNILPTPKTRRVALNVKLMRPSSIEFTECKCVL*KPQGIRK*SPEATFMTMTLPPFLHLIEKFAFPTRLTVKIGLSDG*HSSSSAWNGTPPPILYFCTKQWSKTLGYLIAVKISSRTRGHPDET 6442
Range 4: 4900 to 6060 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
882.7 bits(1920) | 0.0 | 382/387(99%) | 0/387(0%) | Plus/Plus |
Query 3 FHQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRQTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRNHQVFQTSNHRAKVLPEQSHQNRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRGRTGRCLWLEI*PSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRTYS*LKKVSLLRAKMSTRW*LWATICSYATIYWFSTMPLI**VH*KSLDAAWWANRLSPSNISAIMLPQVAVRRRC*WTNSLSHPIAQPPLRLMWEVL 1163 FHQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGR+TSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMR+HQVFQTSNHRAKVLPEQSHQNRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRG TGRCLWLEI PSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRTYS*LKKVSL RAKMSTRW*LWATICSYATIYWFSTMPLI**VH*KSLDAAWWANRLSPSNISAIMLPQVAVRRRC*WTNSLSHPIAQPPLRLMWEVL Subject 4900 FHQGGLVS*RIS*RQLSTQASLTIV*CRSTRWVEAYHSTLMTRSAIHQITLS*RSISWGRRTSRLSAGRVVRSWS*T*LRVTIFLCLAVFKGRTCIQ*TLSTKGASV*RSGQLGASLV*AGCCS*PAACRMRSHQVFQTSNHRAKVLPEQSHQNRGARLYLREVVGKSRGGRHTRYGANKITLRSVSGSGLIIQ*WLLNLTTPQ*HLKWLKPGPLKMPSWST*SIWL*ALRGHTGRCLWLEILPSLPPKVF*KYLIKFMNHYRAFTFTSRAQISFFIQHKTACV*ETYRTYS*LKKVSLPRAKMSTRW*LWATICSYATIYWFSTMPLI**VH*KSLDAAWWANRLSPSNISAIMLPQVAVRRRC*WTNSLSHPIAQPPLRLMWEVL 6060
Range 5: 5095 to 5790 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
517.0 bits(1122) | 0.0 | 228/232(98%) | 0/232(0%) | Minus/Minus |
Query 198 YLFQL*IRTVGLSHASRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**RLYF*P*ATPCTSSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLVISHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT 893 YLFQL*IRTVGLSHA RLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**R YF*P*ATPC SSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLV SHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT Subject 5095 YLFQL*IRTVGLSHAGRLVLNEK*DLCPTCKRESPVVIHKLD*VLSEHLRR**RQYF*P*ATPCMSSQCL*PDTSSTPRRHLQRSRF*PLQMSLGCSQV*EPSLDYQP*ATHTS*RNLVRTISSMSTSP*LPYHFPQIEPCPPILV*LFW*HLGSVVAGLEHLVTSHPTRRRLTATSCLHQRRAELP*TSN*CALRR*SLLNASASFENRKA*ENSHPKLRL*P*PYHPSCT 5790
Range 6: 6257 to 6901 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
453.3 bits(983) | 0.0 | 212/215(99%) | 0/215(0%) | Plus/Plus |
Query 1360 FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLNDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWNY**RS*NKR*RVLVHDPXXXXXXXXXXXXKRKRNTSDDSA*STGKNIQ*CGIV*DEEGR*LPIH*TTAYTCWFVETHTLTGLCRSELKVGR*GRHIY*RRVTSISIRRFASHVRPGWLLSRYMSV*ILDRPSK 2004 FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVL+DRKGNGKVLP*KGR*R*G*TSSKIAVQKANWN+**RS*NKR*RVLVHDPVGEVGYEEVVEGKRKRNTSDDSA*STGKNIQ*CGIV*DEE R*LPIH*TTAYTCWFVETHTLTGLCRSELKVGR*GRHIY*RRVTSISIRRFASHVRPGWLLSRYMSV*ILDRPSK Subject 6257 FWRHKSDTIHKQGEGV*DGLCCFCSKEGKRCIHF*IIQVSVRCLLLVVLSDRKGNGKVLP*KGR*R*G*TSSKIAVQKANWNH**RS*NKR*RVLVHDPVGEVGYEEVVEGKRKRNTSDDSA*STGKNIQ*CGIV*DEECR*LPIH*TTAYTCWFVETHTLTGLCRSELKVGR*GRHIY*RRVTSISIRRFASHVRPGWLLSRYMSV*ILDRPSK 6901
Range 7: 4898 to 5356 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
362.1 bits(784) | 0.0 | 151/153(99%) | 0/153(0%) | Plus/Plus |
Query 1 CFIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGKLLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EITRCSKPATTEPRCYQNNHT 459 CFIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEG+LLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*E+TRCSKPATTEPRCYQNNHT Subject 4898 CFIRVASCPRGYLNGN*VPKRL*PLFSAEVQDGWRRTIPR**RGVLSIR*PYLDGQSRGEGELLD*VQEGW*GHGHKRSFG*LFSYALRFSKDALAFSKLYRRRAHQFDVQGNSARLWCRQDVAVSRRRVG*EVTRCSKPATTEPRCYQNNHT 5356
Range 8: 5702 to 6157 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
326.9 bits(707) | 0.0 | 150/152(99%) | 0/152(0%) | Plus/Plus |
Query 805 QVGHRSHFSFNTRRLACERPTVRIHS*KRYLY*GQRCRRGGSFGRQSVRMRRYTGFPRCH*FDRCTESRSMRHGGRIV*VLRI*VL*CSPRWR*DDDVSGRIR*VTQ*HSHHYG*CGKF*GHKYXXXXXXXXXXXXQQCYHS*LQGGKLYRQ 1260 QVGHRSHFSFNTRR ACERPTVRIHS*KRYLY GQRCRRGGSFGRQSVRMRRYTGFPRCH*FDRCTESRSMRHGGRIV*VLRI*VL*CSPRWR*DDDVSGRIR*VTQ*HSHHYG*CGKF*GHKYGGEEERSEFGRSQQCYHS*LQGGKLYRQ Subject 5702 QVGHRSHFSFNTRRPACERPTVRIHS*KRYLYQGQRCRRGGSFGRQSVRMRRYTGFPRCH*FDRCTESRSMRHGGRIV*VLRI*VL*CSPRWR*DDDVSGRIR*VTQ*HSHHYG*CGKF*GHKYGGEEERSEFGRSQQCYHS*LQGGKLYRQ 6157
Range 9: 6494 to 6901 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
320.0 bits(692) | 0.0 | 136/136(100%) | 0/136(0%) | Minus/Minus |
Query 1597 LRRSVQNSYAHIPRKQPAGANV*SKASDTD*GDASLIYVPTLSSNFELRAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI 2004 LRRSVQNSYAHIPRKQPAGANV*SKASDTD*GDASLIYVPTLSSNFELRAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI Subject 6494 LRRSVQNSYAHIPRKQPAGANV*SKASDTD*GDASLIYVPTLSSNFELRAA*TSERVCLDKPTSICGCLVNRESSAFFVLNNTTSLNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI 6901
Range 10: 6100 to 6495 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
309.0 bits(668) | 0.0 | 130/132(98%) | 0/132(0%) | Plus/Plus |
Query 1203 WKVSTVLPQLTPGW*TLSSGECIKGFWWMRCT*CIKAYYN*ASSQPARRKASFLET*IRYHS*TGRRCLGWIVLFLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQ 1598 WKVSTVLPQLTPGW*TLSSGECIKGFWWMRCT*CIKAYYN*ASSQ ARRKASFLET*IRYHS*TGRRCLGWIVL LFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQ Subject 6100 WKVSTVLPQLTPGW*TLSSGECIKGFWWMRCT*CIKAYYN*ASSQSARRKASFLET*IRYHS*TGRRCLGWIVLLLFQRRKALYTLLNHTGVR*MFATCCPQ*P*GERKSVTLKRSLAVRINQ**DRCPKGQ 6495
Range 11: 6112 to 6486 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
276.0 bits(596) | 0.0 | 125/125(100%) | 0/125(0%) | Minus/Minus |
Query 1215 WTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTXXXXXXXXXXXLDASCTPHPPKPFYTFP*R*SLPPWS*LW*HC 1589 WTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLDASCTPHPPKPFYTFP*R*SLPPWS*LW*HC Subject 6112 WTAILLLVYPYR*RPFQGNTFPFPLRSLRTTSSKHLTDTCMI*KCIQRFPSLEQKQHNPS*TPSPCL*MVSDLCLQKRGLPTRRLRRRLVVVSLDASCTPHPPKPFYTFP*R*SLPPWS*LW*HC 6486
Range 12: 6589 to 6903 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
264.5 bits(571) | 0.0 | 104/105(99%) | 0/105(0%) | Plus/Plus |
Query 1692 EKEKKHQ**QCMKHREKHSVMWYCLGRRRPMTPYSLNNRIYLLVCRDTHAHWFMPL*AQSWTIRSAHILATRHLNQYPTLCFTRSPRLVAFEVYERMNFGPTFEG 2006 EKEKKHQ**QCMKHREKHSVMWYCLGRR PMTPYSLNNRIYLLVCRDTHAHWFMPL*AQSWTIRSAHILATRHLNQYPTLCFTRSPRLVAFEVYERMNFGPTFEG Subject 6589 EKEKKHQ**QCMKHREKHSVMWYCLGRRMPMTPYSLNNRIYLLVCRDTHAHWFMPL*AQSWTIRSAHILATRHLNQYPTLCFTRSPRLVAFEVYERMNFGPTFEG 6903
Range 13: 6619 to 6903 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
221.0 bits(476) | 0.0 | 94/95(99%) | 0/95(0%) | Minus/Minus |
Query 1722 PFEGRSKIHTLIYLESNQPGRTCEAKRRILIEVTRR*YMCRPYRPTLSSERHKPVSVCVSTNQQVYAVV**IGSHRPSSS*TIPHH*MFFPVLHA 2006 PFEGRSKIHTLIYLESNQPGRTCEAKRRILIEVTRR*YMCRPYRPTLSSERHKPVSVCVSTNQQVYAVV**IGSHR SSS*TIPHH*MFFPVLHA Subject 6619 PFEGRSKIHTLIYLESNQPGRTCEAKRRILIEVTRR*YMCRPYRPTLSSERHKPVSVCVSTNQQVYAVV**IGSHRHSSS*TIPHH*MFFPVLHA 6903
Range 14: 5408 to 5650 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
174.3 bits(374) | 0.0 | 79/81(98%) | 0/81(0%) | Plus/Plus |
Query 511 EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*EDVQGVAYG*KYSRHYRRRC 753 EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*ED+QGVAYG*KY RHYRRRC Subject 5408 EVDILDMVRTRLR*EV*VAQG**SSDGS*T*LHPNDI*SG*NRDL*RCRRGVLEVSGYRH*EDIQGVAYG*KYCRHYRRRC 5650
Range 15: 4900 to 5049 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
124.3 bits(265) | 0.0 | 50/50(100%) | 0/50(0%) | Minus/Minus |
Query 3 GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLMK 152 GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLMK Subject 4900 GYLMDSTPRHQRGMVRLHPSCTSALNNGQRRLGT*LPLRYPLGHEATLMK 5049
Nucleotide Sequence (194 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
118.8 | 757.6 | 74% | 6.15e-26 | 83% | JX559645.1 | |
118.8 | 733.7 | 74% | 6.15e-26 | 83% | NC_004667.1 | |
118.8 | 758.5 | 76% | 6.15e-26 | 81% | KP844580.1 | |
118.8 | 733.7 | 74% | 6.15e-26 | 83% | AF037268.2 | |
118.8 | 757.6 | 74% | 6.15e-26 | 83% | GQ352631.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 10
Range 1: 8590 to 8742 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
118.8 bits(253) | 0.0 | 48/51(94%) | 0/51(0%) | Plus/Plus |
Query 2 LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPLKLFVKFGASKLNE 154 LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPLKLFVKFGASK ++ Subject 8590 LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPLKLFVKFGASKTSD 8742
Range 2: 8590 to 8733 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
111.0 bits(236) | 0.0 | 48/48(100%) | 0/48(0%) | Minus/Minus |
Query 2 FGSSKLNEEFKWIGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQ 145 FGSSKLNEEFKWIGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQ Subject 8590 FGSSKLNEEFKWIGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQ 8733
Range 3: 8589 to 8732 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
108.3 bits(230) | 0.0 | 48/48(100%) | 0/48(0%) | Minus/Minus |
Query 1 LEAPNLTKSLSGSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLR 144 LEAPNLTKSLSGSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLR Subject 8589 LEAPNLTKSLSGSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLR 8732
Range 4: 8591 to 8731 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
107.4 bits(228) | 0.0 | 47/47(100%) | 0/47(0%) | Minus/Minus |
Query 3 WKLQT*RRV*VDREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRS 143 WKLQT*RRV*VDREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRS Subject 8591 WKLQT*RRV*VDREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRS 8731
Range 5: 8591 to 8701 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.5 bits(165) | 0.0 | 37/37(100%) | 0/37(0%) | Plus/Plus |
Query 3 *AIILVLT*RYLTKLLLIFVLSF*FKSRIVSFLFPIH 113 *AIILVLT*RYLTKLLLIFVLSF*FKSRIVSFLFPIH Subject 8591 *AIILVLT*RYLTKLLLIFVLSF*FKSRIVSFLFPIH 8701
Range 6: 8688 to 8741 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
36.8 bits(74) | 0.0 | 16/18(89%) | 0/18(0%) | Plus/Plus |
Query 100 CSRST*TLR*VWSFQT*R 153 CSRST*TLR*VWSFQ R Subject 8688 CSRST*TLR*VWSFQNFR 8741
Range 7: 8671 to 8733 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.4 bits(108) | 0.0 | 20/21(95%) | 0/21(0%) | Plus/Minus |
Query 131 FGASKLNEEFKWIGNKKETIL 193 FG+SKLNEEFKWIGNKKETIL Subject 8671 FGSSKLNEEFKWIGNKKETIL 8733
Range 8: 8671 to 8742 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.9 bits(107) | 0.0 | 20/24(83%) | 0/24(0%) | Minus/Plus |
Query 122 EDSLFFVPDPLKLFVKFGSSKLNE 193 EDSLFFVPDPLKLFVKFG+SK ++ Subject 8671 EDSLFFVPDPLKLFVKFGASKTSD 8742
Grapevine leafroll associated virus 3, complete genome
Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 10
Range 1: 8011 to 8163 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
118.8 bits(253) | 0.0 | 48/51(94%) | 0/51(0%) | Plus/Plus |
Query 2 LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPLKLFVKFGASKLNE 154 LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPLKLFVKFGASK ++ Subject 8011 LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPLKLFVKFGASKTSD 8163
Range 2: 8011 to 8154 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
103.2 bits(219) | 0.0 | 46/48(96%) | 0/48(0%) | Minus/Minus |
Query 2 FGSSKLNEEFKWIGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQ 145 FGSSKLNEEFKWIGNKKETILDLN*KLRTKI SSLVK LYVKTKIIAQ Subject 8011 FGSSKLNEEFKWIGNKKETILDLN*KLRTKIWSSLVKNLYVKTKIIAQ 8154
Range 3: 8010 to 8153 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
103.2 bits(219) | 0.0 | 46/48(96%) | 0/48(0%) | Minus/Minus |
Query 1 LEAPNLTKSLSGSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLR 144 LEAPNLTKSLSGSGTKKRLSST*TKNLEQK GAAWL IFTSKPKLSLR Subject 8010 LEAPNLTKSLSGSGTKKRLSST*TKNLEQKYGAAWLKIFTSKPKLSLR 8153
Range 4: 8012 to 8152 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.4 bits(215) | 0.0 | 45/47(96%) | 0/47(0%) | Minus/Minus |
Query 3 WKLQT*RRV*VDREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRS 143 WKLQT*RRV*VDREQKRDYPRLELKT*NKN EQLG* SLRQNQNYRS Subject 8012 WKLQT*RRV*VDREQKRDYPRLELKT*NKNMEQLG*KSLRQNQNYRS 8152
Range 5: 8012 to 8122 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
73.5 bits(154) | 0.0 | 35/37(95%) | 0/37(0%) | Plus/Plus |
Query 3 *AIILVLT*RYLTKLLLIFVLSF*FKSRIVSFLFPIH 113 *AIILVLT*R+LTKLL IFVLSF*FKSRIVSFLFPIH Subject 8012 *AIILVLT*RFLTKLLHIFVLSF*FKSRIVSFLFPIH 8122
Range 6: 8109 to 8162 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
36.8 bits(74) | 0.0 | 16/18(89%) | 0/18(0%) | Plus/Plus |
Query 100 CSRST*TLR*VWSFQT*R 153 CSRST*TLR*VWSFQ R Subject 8109 CSRST*TLR*VWSFQNFR 8162
Range 7: 8092 to 8154 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.4 bits(108) | 0.0 | 20/21(95%) | 0/21(0%) | Plus/Minus |
Query 131 FGASKLNEEFKWIGNKKETIL 193 FG+SKLNEEFKWIGNKKETIL Subject 8092 FGSSKLNEEFKWIGNKKETIL 8154
Range 8: 8092 to 8163 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.9 bits(107) | 0.0 | 20/24(83%) | 0/24(0%) | Minus/Plus |
Query 122 EDSLFFVPDPLKLFVKFGSSKLNE 193 EDSLFFVPDPLKLFVKFG+SK ++ Subject 8092 EDSLFFVPDPLKLFVKFGASKTSD 8163
Grapevine leafroll associated virus 3 isolate IB 31 RNA dependent RNA polymerase gene, partial cds
Sequence ID: KP844580.1 Length: 954 Number of Matches: 10
Range 1: 794 to 946 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
118.8 bits(253) | 0.0 | 48/51(94%) | 0/51(0%) | Plus/Plus |
Query 2 LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPLKLFVKFGASKLNE 154 LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPLKLFVKFGASK ++ Subject 794 LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPLKLFVKFGASKTSD 946
Range 2: 794 to 937 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
111.0 bits(236) | 0.0 | 48/48(100%) | 0/48(0%) | Minus/Minus |
Query 2 FGSSKLNEEFKWIGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQ 145 FGSSKLNEEFKWIGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQ Subject 794 FGSSKLNEEFKWIGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQ 937
Range 3: 793 to 936 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
108.3 bits(230) | 0.0 | 48/48(100%) | 0/48(0%) | Minus/Minus |
Query 1 LEAPNLTKSLSGSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLR 144 LEAPNLTKSLSGSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLR Subject 793 LEAPNLTKSLSGSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLR 936
Range 4: 795 to 935 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
107.4 bits(228) | 0.0 | 47/47(100%) | 0/47(0%) | Minus/Minus |
Query 3 WKLQT*RRV*VDREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRS 143 WKLQT*RRV*VDREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRS Subject 795 WKLQT*RRV*VDREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRS 935
Range 5: 795 to 905 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.5 bits(165) | 0.0 | 37/37(100%) | 0/37(0%) | Plus/Plus |
Query 3 *AIILVLT*RYLTKLLLIFVLSF*FKSRIVSFLFPIH 113 *AIILVLT*RYLTKLLLIFVLSF*FKSRIVSFLFPIH Subject 795 *AIILVLT*RYLTKLLLIFVLSF*FKSRIVSFLFPIH 905
Range 6: 892 to 945 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
36.8 bits(74) | 0.0 | 16/18(89%) | 0/18(0%) | Plus/Plus |
Query 100 CSRST*TLR*VWSFQT*R 153 CSRST*TLR*VWSFQ R Subject 892 CSRST*TLR*VWSFQNFR 945
Range 7: 875 to 937 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.4 bits(108) | 0.0 | 20/21(95%) | 0/21(0%) | Plus/Minus |
Query 131 FGASKLNEEFKWIGNKKETIL 193 FG+SKLNEEFKWIGNKKETIL Subject 875 FGSSKLNEEFKWIGNKKETIL 937
Range 8: 875 to 946 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.9 bits(107) | 0.0 | 20/24(83%) | 0/24(0%) | Minus/Plus |
Query 122 EDSLFFVPDPLKLFVKFGSSKLNE 193 EDSLFFVPDPLKLFVKFG+SK ++ Subject 875 EDSLFFVPDPLKLFVKFGASKTSD 946
Grapevine leafroll associated virus 3, complete genome
Sequence ID: AF037268.2 Length: 17919 Number of Matches: 10
Range 1: 8011 to 8163 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
118.8 bits(253) | 0.0 | 48/51(94%) | 0/51(0%) | Plus/Plus |
Query 2 LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPLKLFVKFGASKLNE 154 LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPLKLFVKFGASK ++ Subject 8011 LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPLKLFVKFGASKTSD 8163
Range 2: 8011 to 8154 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
103.2 bits(219) | 0.0 | 46/48(96%) | 0/48(0%) | Minus/Minus |
Query 2 FGSSKLNEEFKWIGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQ 145 FGSSKLNEEFKWIGNKKETILDLN*KLRTKI SSLVK LYVKTKIIAQ Subject 8011 FGSSKLNEEFKWIGNKKETILDLN*KLRTKIWSSLVKNLYVKTKIIAQ 8154
Range 3: 8010 to 8153 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
103.2 bits(219) | 0.0 | 46/48(96%) | 0/48(0%) | Minus/Minus |
Query 1 LEAPNLTKSLSGSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLR 144 LEAPNLTKSLSGSGTKKRLSST*TKNLEQK GAAWL IFTSKPKLSLR Subject 8010 LEAPNLTKSLSGSGTKKRLSST*TKNLEQKYGAAWLKIFTSKPKLSLR 8153
Range 4: 8012 to 8152 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.4 bits(215) | 0.0 | 45/47(96%) | 0/47(0%) | Minus/Minus |
Query 3 WKLQT*RRV*VDREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRS 143 WKLQT*RRV*VDREQKRDYPRLELKT*NKN EQLG* SLRQNQNYRS Subject 8012 WKLQT*RRV*VDREQKRDYPRLELKT*NKNMEQLG*KSLRQNQNYRS 8152
Range 5: 8012 to 8122 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
73.5 bits(154) | 0.0 | 35/37(95%) | 0/37(0%) | Plus/Plus |
Query 3 *AIILVLT*RYLTKLLLIFVLSF*FKSRIVSFLFPIH 113 *AIILVLT*R+LTKLL IFVLSF*FKSRIVSFLFPIH Subject 8012 *AIILVLT*RFLTKLLHIFVLSF*FKSRIVSFLFPIH 8122
Range 6: 8109 to 8162 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
36.8 bits(74) | 0.0 | 16/18(89%) | 0/18(0%) | Plus/Plus |
Query 100 CSRST*TLR*VWSFQT*R 153 CSRST*TLR*VWSFQ R Subject 8109 CSRST*TLR*VWSFQNFR 8162
Range 7: 8092 to 8154 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.4 bits(108) | 0.0 | 20/21(95%) | 0/21(0%) | Plus/Minus |
Query 131 FGASKLNEEFKWIGNKKETIL 193 FG+SKLNEEFKWIGNKKETIL Subject 8092 FGSSKLNEEFKWIGNKKETIL 8154
Range 8: 8092 to 8163 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.9 bits(107) | 0.0 | 20/24(83%) | 0/24(0%) | Minus/Plus |
Query 122 EDSLFFVPDPLKLFVKFGSSKLNE 193 EDSLFFVPDPLKLFVKFG+SK ++ Subject 8092 EDSLFFVPDPLKLFVKFGASKTSD 8163
Grapevine leafroll associated virus 3 isolate 621, complete genome
Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 10
Range 1: 8590 to 8742 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
118.8 bits(253) | 0.0 | 48/51(94%) | 0/51(0%) | Plus/Plus |
Query 2 LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPLKLFVKFGASKLNE 154 LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPLKLFVKFGASK ++ Subject 8590 LSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFFVPDPLKLFVKFGASKTSD 8742
Range 2: 8590 to 8733 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
111.0 bits(236) | 0.0 | 48/48(100%) | 0/48(0%) | Minus/Minus |
Query 2 FGSSKLNEEFKWIGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQ 145 FGSSKLNEEFKWIGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQ Subject 8590 FGSSKLNEEFKWIGNKKETILDLN*KLRTKIRSSLVKYLYVKTKIIAQ 8733
Range 3: 8589 to 8732 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
108.3 bits(230) | 0.0 | 48/48(100%) | 0/48(0%) | Minus/Minus |
Query 1 LEAPNLTKSLSGSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLR 144 LEAPNLTKSLSGSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLR Subject 8589 LEAPNLTKSLSGSGTKKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLR 8732
Range 4: 8591 to 8731 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
107.4 bits(228) | 0.0 | 47/47(100%) | 0/47(0%) | Minus/Minus |
Query 3 WKLQT*RRV*VDREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRS 143 WKLQT*RRV*VDREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRS Subject 8591 WKLQT*RRV*VDREQKRDYPRLELKT*NKNKEQLG*ISLRQNQNYRS 8731
Range 5: 8591 to 8701 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.5 bits(165) | 0.0 | 37/37(100%) | 0/37(0%) | Plus/Plus |
Query 3 *AIILVLT*RYLTKLLLIFVLSF*FKSRIVSFLFPIH 113 *AIILVLT*RYLTKLLLIFVLSF*FKSRIVSFLFPIH Subject 8591 *AIILVLT*RYLTKLLLIFVLSF*FKSRIVSFLFPIH 8701
Range 6: 8688 to 8741 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
36.8 bits(74) | 0.0 | 16/18(89%) | 0/18(0%) | Plus/Plus |
Query 100 CSRST*TLR*VWSFQT*R 153 CSRST*TLR*VWSFQ R Subject 8688 CSRST*TLR*VWSFQNFR 8741
Range 7: 8671 to 8733 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.4 bits(108) | 0.0 | 20/21(95%) | 0/21(0%) | Plus/Minus |
Query 131 FGASKLNEEFKWIGNKKETIL 193 FG+SKLNEEFKWIGNKKETIL Subject 8671 FGSSKLNEEFKWIGNKKETIL 8733
Range 8: 8671 to 8742 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.9 bits(107) | 0.0 | 20/24(83%) | 0/24(0%) | Minus/Plus |
Query 122 EDSLFFVPDPLKLFVKFGSSKLNE 193 EDSLFFVPDPLKLFVKFG+SK ++ Subject 8671 EDSLFFVPDPLKLFVKFGASKTSD 8742
Nucleotide Sequence (164 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
118.4 | 440.5 | 35% | 5.482e-26 | 96% | KM058745.1 |
Alignments
Grapevine leafroll associated virus 3 isolate GH24, complete genome
Sequence ID: KM058745.1 Length: 18493 Number of Matches: 7
Range 1: 548 to 709 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
118.4 bits(252) | 0.0 | 52/54(96%) | 0/54(0%) | Plus/Minus |
Query 1 ER*ANRTTLNKNRRERNS*KIRKRVLQTRP*IKLEEKVLTLRKG*KYYQHHKRK 162 ER*ANRTTLNKNRRERNS*KIRK+VLQTRP*IKLEEKVLTLRKG KYYQHHKRK Subject 548 ER*ANRTTLNKNRRERNS*KIRKKVLQTRP*IKLEEKVLTLRKGKKYYQHHKRK 709
Range 2: 546 to 638 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.9 bits(168) | 0.0 | 30/31(97%) | 0/31(0%) | Minus/Plus |
Query 72 FFLLWCW*YFYPFLKVSTFSSNFI*GRVCKT 164 FFLLWCW*YF+PFLKVSTFSSNFI*GRVCKT Subject 546 FFLLWCW*YFFPFLKVSTFSSNFI*GRVCKT 638
Range 3: 614 to 709 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.2 bits(112) | 0.0 | 31/32(97%) | 0/32(0%) | Minus/Plus |
Query 1 YLGSCL*NPFPYFLAXXXXXXXX*CGPICLPF 96 YLGSCL*N FPYFLAISFSSIFI*CGPICLPF Subject 614 YLGSCL*NLFPYFLAISFSSIFI*CGPICLPF 709
Range 4: 546 to 638 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
72.1 bits(151) | 0.0 | 30/31(97%) | 0/31(0%) | Plus/Minus |
Query 72 GFTNTTLNKVRRESADFKKRIEILPTPQKKK 164 GFTNTTLNKVRRESADFKKR EILPTPQKKK Subject 546 GFTNTTLNKVRRESADFKKRKEILPTPQKKK 638
Range 5: 685 to 708 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
24.0 bits(46) | 0.0 | 8/8(100%) | 0/8(0%) | Plus/Minus |
Query 2 KGKQIGPH 25 KGKQIGPH Subject 685 KGKQIGPH 708
Nucleotide Sequence (507 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
377.7 | 2038.1 | 23% | 5.788e-103 | 97% | EU344893.1 | |
376.3 | 2039.9 | 23% | 1.501e-102 | 97% | GU983863.1 | |
375.9 | 2033.1 | 23% | 2.062e-102 | 96% | JX559645.1 | |
375.9 | 2028.5 | 23% | 2.062e-102 | 96% | KX756669.1 | |
372.7 | 2031.2 | 23% | 1.905e-101 | 96% | NC_004667.1 |
Alignments
Grapevine leafroll associated virus 3 isolate Cl 766, complete genome
Sequence ID: EU344893.1 Length: 17919 Number of Matches: 9
Range 1: 11661 to 12146 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
377.7 bits(818) | 0.0 | 160/162(99%) | 0/162(0%) | Plus/Plus |
Query 8 GFSDLRIEENFLKSAVDTDTILNG*IYLCNGDIKP*RG*RRGILGSE*GIYWTGRALLFESW**VHRCLGKLCCED*WIYVDFAIYDRCFRVFLVERRIDYHAL*PNKL*ELGQVI*GFKRVFQDPN*R*DLCIAFCGQQSSKERQG*HHGSESTTIAIGRQ 493 GFSDLRIEENFLKSAVDTDTILNG*IYLCNGDIKP*RG*RRGILGSE*GIYWTGRALLFESW**VHRCLGKLCCED*WIYVDFAIYDRCFRVFLVERRIDYHAL*PNKL*ELGQVI*GFKRVFQDPN*R*DLC+AFCGQQSSKERQG*HHGSESTTIAIGR+ Subject 11661 GFSDLRIEENFLKSAVDTDTILNG*IYLCNGDIKP*RG*RRGILGSE*GIYWTGRALLFESW**VHRCLGKLCCED*WIYVDFAIYDRCFRVFLVERRIDYHAL*PNKL*ELGQVI*GFKRVFQDPN*R*DLCVAFCGQQSSKERQG*HHGSESTTIAIGRR 12146
Range 2: 11662 to 12144 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
373.1 bits(808) | 0.0 | 161/161(100%) | 0/161(0%) | Plus/Plus |
Query 9 GSRI*G*KKIF*NPP*IQIRF*MDKYIYVTGILNPNEARDEVFSVVNKGYIGPGGRSFSNRGSKYTVVWENSAARISGFTSTSQSTIDAFAYFLLKGGLTTTLSNPINCENWVRSSKDLSAFFRTLIKGKIYASRSVDSNLPKKDRDDIMEASRRLSPSDA 491 GSRI*G*KKIF*NPP*IQIRF*MDKYIYVTGILNPNEARDEVFSVVNKGYIGPGGRSFSNRGSKYTVVWENSAARISGFTSTSQSTIDAFAYFLLKGGLTTTLSNPINCENWVRSSKDLSAFFRTLIKGKIYASRSVDSNLPKKDRDDIMEASRRLSPSDA Subject 11662 GSRI*G*KKIF*NPP*IQIRF*MDKYIYVTGILNPNEARDEVFSVVNKGYIGPGGRSFSNRGSKYTVVWENSAARISGFTSTSQSTIDAFAYFLLKGGLTTTLSNPINCENWVRSSKDLSAFFRTLIKGKIYASRSVDSNLPKKDRDDIMEASRRLSPSDA 12144
Range 3: 11661 to 12143 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
331.4 bits(717) | 0.0 | 160/161(99%) | 0/161(0%) | Minus/Minus |
Query 8 ASDGDXXXXXXXXXXXXXFGRLLSTERDA*ILPLIRVLKNALKSLDDLTQFSQFIGLESVVVNPPFNKKYAKASIVDCEVDVNPLILAAEFSQTTVYLLPRFEKERPPGPIYPLFTTENTSSLASLGFNIPVT*IYLSIQNRICIYGGFQKIFFYP*IREP 490 ASDGDSRRLASMMSSLSFFGRLLSTERDA*ILPLIRVLKNALKSLDDLTQFSQFIGLESVVVNPPFNKKYAKASIVDCEVDVNPLILAAEFSQTTVYLLPRFEKERPPGPIYPLFTTENTSSLASLGFNIPVT*IYLSIQNRICIYGGF KIFFYP*IREP Subject 11661 ASDGDSRRLASMMSSLSFFGRLLSTERDA*ILPLIRVLKNALKSLDDLTQFSQFIGLESVVVNPPFNKKYAKASIVDCEVDVNPLILAAEFSQTTVYLLPRFEKERPPGPIYPLFTTENTSSLASLGFNIPVT*IYLSIQNRICIYGGF*KIFFYP*IREP 12143
Range 4: 11798 to 12142 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
264.5 bits(571) | 0.0 | 114/115(99%) | 0/115(0%) | Minus/Minus |
Query 145 RPMAIVVDSLP*CHPCLSLEDCCPQNAMHKSYL*LGS*KTRLNP*MT*PNSHSLLG*RAW*SIRLSTRNTRKHLS*IAKST*IH*SSQQSFPRQRCTYYHDSKRSALPVQYIPYS 489 RPMAIVVDSLP*CHPCLSLEDCCPQNA HKSYL*LGS*KTRLNP*MT*PNSHSLLG*RAW*SIRLSTRNTRKHLS*IAKST*IH*SSQQSFPRQRCTYYHDSKRSALPVQYIPYS Subject 11798 RPMAIVVDSLP*CHPCLSLEDCCPQNATHKSYL*LGS*KTRLNP*MT*PNSHSLLG*RAW*SIRLSTRNTRKHLS*IAKST*IH*SSQQSFPRQRCTYYHDSKRSALPVQYIPYS 12142
Range 5: 11654 to 11755 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.0 bits(166) | 0.0 | 33/34(97%) | 0/34(0%) | Minus/Minus |
Query 1 SPLHKYIYPFKIVSVSTADFKKFSSILKSENPKS 102 SPLHKYIYPFKIVSVSTADFKKFSSILKSENP S Subject 11654 SPLHKYIYPFKIVSVSTADFKKFSSILKSENPLS 11755
Range 6: 11659 to 11880 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
171.1 bits(367) | 0.0 | 73/74(99%) | 0/74(0%) | Minus/Minus |
Query 6 SRVFPDNGVLTTTIRKGAPSRSNISLIHYREYLVSSLVRV*YPRYINIFIHSKSYLYLRRISKNFLLSLNPRTP 227 SRVFPDNGVLTTTIRKGAPSRSNISLIHYREYLVSSLVRV*YPRYINIFIHSKSYLYLRRI KNFLLSLNPRTP Subject 11659 SRVFPDNGVLTTTIRKGAPSRSNISLIHYREYLVSSLVRV*YPRYINIFIHSKSYLYLRRILKNFLLSLNPRTP 11880
Range 7: 11935 to 12144 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
162.4 bits(348) | 0.0 | 69/70(99%) | 0/70(0%) | Minus/Minus |
Query 282 GVRWR*SSTRFHDVIPVFLWKIAVHRTRCINLTFN*GPEKRA*ILR*PDPILTVYWVRERGSQSAFQQEI 491 GVRWR*SSTRFHDVIPVFLWKIAVHRTR INLTFN*GPEKRA*ILR*PDPILTVYWVRERGSQSAFQQEI Subject 11935 GVRWR*SSTRFHDVIPVFLWKIAVHRTRRINLTFN*GPEKRA*ILR*PDPILTVYWVRERGSQSAFQQEI 12144
Range 8: 11936 to 12145 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
160.5 bits(344) | 0.0 | 69/70(99%) | 0/70(0%) | Plus/Plus |
Query 283 ISC*KAD*LPRSLTQ*TVRIGSGHLRI*ARFSGP*LKVRFMHRVLWTAIFQRKTGMTSWKRVDDYRHRTP 492 ISC*KAD*LPRSLTQ*TVRIGSGHLRI*ARFSGP*LKVRFM RVLWTAIFQRKTGMTSWKRVDDYRHRTP Subject 11936 ISC*KAD*LPRSLTQ*TVRIGSGHLRI*ARFSGP*LKVRFMRRVLWTAIFQRKTGMTSWKRVDDYRHRTP 12145
Range 9: 11720 to 11875 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
118.4 bits(252) | 0.0 | 52/52(100%) | 0/52(0%) | Plus/Plus |
Query 67 DFEWINIFM*RGY*TLTRLETRYSR**IRDILDREGAPFRIVVVSTPLSGKT 222 DFEWINIFM*RGY*TLTRLETRYSR**IRDILDREGAPFRIVVVSTPLSGKT Subject 11720 DFEWINIFM*RGY*TLTRLETRYSR**IRDILDREGAPFRIVVVSTPLSGKT 11875
Grapevine leafroll associated virus 3 isolate WA MR, complete genome
Sequence ID: GU983863.1 Length: 18498 Number of Matches: 9
Range 1: 12240 to 12725 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
376.3 bits(815) | 0.0 | 160/162(99%) | 0/162(0%) | Plus/Plus |
Query 8 GFSDLRIEENFLKSAVDTDTILNG*IYLCNGDIKP*RG*RRGILGSE*GIYWTGRALLFESW**VHRCLGKLCCED*WIYVDFAIYDRCFRVFLVERRIDYHAL*PNKL*ELGQVI*GFKRVFQDPN*R*DLCIAFCGQQSSKERQG*HHGSESTTIAIGRQ 493 GFSDLRIEENFLKSAVDTDTILNG*IYLCNGDIKP*RG*RRGILGSE*GIYWTGRALLF+SW**VHRCLGKLCCED*WIYVDFAIYDRCFRVFLVERRIDYHAL*PNKL*ELGQVI*GFKRVFQDPN*R*DLCIAFCGQQSSKERQG*HHGSESTTIAIGR+ Subject 12240 GFSDLRIEENFLKSAVDTDTILNG*IYLCNGDIKP*RG*RRGILGSE*GIYWTGRALLFKSW**VHRCLGKLCCED*WIYVDFAIYDRCFRVFLVERRIDYHAL*PNKL*ELGQVI*GFKRVFQDPN*R*DLCIAFCGQQSSKERQG*HHGSESTTIAIGRR 12725
Range 2: 12241 to 12723 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
373.1 bits(808) | 0.0 | 161/161(100%) | 0/161(0%) | Plus/Plus |
Query 9 GSRI*G*KKIF*NPP*IQIRF*MDKYIYVTGILNPNEARDEVFSVVNKGYIGPGGRSFSNRGSKYTVVWENSAARISGFTSTSQSTIDAFAYFLLKGGLTTTLSNPINCENWVRSSKDLSAFFRTLIKGKIYASRSVDSNLPKKDRDDIMEASRRLSPSDA 491 GSRI*G*KKIF*NPP*IQIRF*MDKYIYVTGILNPNEARDEVFSVVNKGYIGPGGRSFSNRGSKYTVVWENSAARISGFTSTSQSTIDAFAYFLLKGGLTTTLSNPINCENWVRSSKDLSAFFRTLIKGKIYASRSVDSNLPKKDRDDIMEASRRLSPSDA Subject 12241 GSRI*G*KKIF*NPP*IQIRF*MDKYIYVTGILNPNEARDEVFSVVNKGYIGPGGRSFSNRGSKYTVVWENSAARISGFTSTSQSTIDAFAYFLLKGGLTTTLSNPINCENWVRSSKDLSAFFRTLIKGKIYASRSVDSNLPKKDRDDIMEASRRLSPSDA 12723
Range 3: 12240 to 12722 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
331.4 bits(717) | 0.0 | 160/161(99%) | 0/161(0%) | Minus/Minus |
Query 8 ASDGDXXXXXXXXXXXXXFGRLLSTERDA*ILPLIRVLKNALKSLDDLTQFSQFIGLESVVVNPPFNKKYAKASIVDCEVDVNPLILAAEFSQTTVYLLPRFEKERPPGPIYPLFTTENTSSLASLGFNIPVT*IYLSIQNRICIYGGFQKIFFYP*IREP 490 ASDGDSRRLASMMSSLSFFGRLLSTERDA*ILPLIRVLKNALKSLDDLTQFSQFIGLESVVVNPPFNKKYAKASIVDCEVDVNPLILAAEFSQTTVYLLPRFEKERPPGPIYPLFTTENTSSLASLGFNIPVT*IYLSIQNRICIYGGF KIFFYP*IREP Subject 12240 ASDGDSRRLASMMSSLSFFGRLLSTERDA*ILPLIRVLKNALKSLDDLTQFSQFIGLESVVVNPPFNKKYAKASIVDCEVDVNPLILAAEFSQTTVYLLPRFEKERPPGPIYPLFTTENTSSLASLGFNIPVT*IYLSIQNRICIYGGF*KIFFYP*IREP 12722
Range 4: 12377 to 12721 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
264.5 bits(571) | 0.0 | 114/115(99%) | 0/115(0%) | Minus/Minus |
Query 145 RPMAIVVDSLP*CHPCLSLEDCCPQNAMHKSYL*LGS*KTRLNP*MT*PNSHSLLG*RAW*SIRLSTRNTRKHLS*IAKST*IH*SSQQSFPRQRCTYYHDSKRSALPVQYIPYS 489 RPMAIVVDSLP*CHPCLSLEDCCPQNAMHKSYL*LGS*KTRLNP*MT*PNSHSLLG*RAW*SIRLSTRNTRKHLS*IAKST*IH*SSQQSFPRQRCTYYHD KRSALPVQYIPYS Subject 12377 RPMAIVVDSLP*CHPCLSLEDCCPQNAMHKSYL*LGS*KTRLNP*MT*PNSHSLLG*RAW*SIRLSTRNTRKHLS*IAKST*IH*SSQQSFPRQRCTYYHDLKRSALPVQYIPYS 12721
Range 5: 12233 to 12334 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.0 bits(166) | 0.0 | 33/34(97%) | 0/34(0%) | Minus/Minus |
Query 1 SPLHKYIYPFKIVSVSTADFKKFSSILKSENPKS 102 SPLHKYIYPFKIVSVSTADFKKFSSILKSENP S Subject 12233 SPLHKYIYPFKIVSVSTADFKKFSSILKSENPLS 12334
Range 6: 12514 to 12723 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
167.9 bits(360) | 0.0 | 70/70(100%) | 0/70(0%) | Minus/Minus |
Query 282 GVRWR*SSTRFHDVIPVFLWKIAVHRTRCINLTFN*GPEKRA*ILR*PDPILTVYWVRERGSQSAFQQEI 491 GVRWR*SSTRFHDVIPVFLWKIAVHRTRCINLTFN*GPEKRA*ILR*PDPILTVYWVRERGSQSAFQQEI Subject 12514 GVRWR*SSTRFHDVIPVFLWKIAVHRTRCINLTFN*GPEKRA*ILR*PDPILTVYWVRERGSQSAFQQEI 12723
Range 7: 12238 to 12459 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
166.9 bits(358) | 0.0 | 72/74(97%) | 0/74(0%) | Minus/Minus |
Query 6 SRVFPDNGVLTTTIRKGAPSRSNISLIHYREYLVSSLVRV*YPRYINIFIHSKSYLYLRRISKNFLLSLNPRTP 227 SRVFPDNGVLTTTI KGAPSRSNISLIHYREYLVSSLVRV*YPRYINIFIHSKSYLYLRRI KNFLLSLNPRTP Subject 12238 SRVFPDNGVLTTTI*KGAPSRSNISLIHYREYLVSSLVRV*YPRYINIFIHSKSYLYLRRILKNFLLSLNPRTP 12459
Range 8: 12515 to 12724 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
164.2 bits(352) | 0.0 | 70/70(100%) | 0/70(0%) | Plus/Plus |
Query 283 ISC*KAD*LPRSLTQ*TVRIGSGHLRI*ARFSGP*LKVRFMHRVLWTAIFQRKTGMTSWKRVDDYRHRTP 492 ISC*KAD*LPRSLTQ*TVRIGSGHLRI*ARFSGP*LKVRFMHRVLWTAIFQRKTGMTSWKRVDDYRHRTP Subject 12515 ISC*KAD*LPRSLTQ*TVRIGSGHLRI*ARFSGP*LKVRFMHRVLWTAIFQRKTGMTSWKRVDDYRHRTP 12724
Range 9: 12299 to 12454 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
116.5 bits(248) | 0.0 | 51/52(98%) | 0/52(0%) | Plus/Plus |
Query 67 DFEWINIFM*RGY*TLTRLETRYSR**IRDILDREGAPFRIVVVSTPLSGKT 222 DFEWINIFM*RGY*TLTRLETRYSR**IRDILDREGAPF+IVVVSTPLSGKT Subject 12299 DFEWINIFM*RGY*TLTRLETRYSR**IRDILDREGAPFQIVVVSTPLSGKT 12454
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 9
Range 1: 12240 to 12725 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
375.9 bits(814) | 0.0 | 160/162(99%) | 0/162(0%) | Plus/Plus |
Query 8 GFSDLRIEENFLKSAVDTDTILNG*IYLCNGDIKP*RG*RRGILGSE*GIYWTGRALLFESW**VHRCLGKLCCED*WIYVDFAIYDRCFRVFLVERRIDYHAL*PNKL*ELGQVI*GFKRVFQDPN*R*DLCIAFCGQQSSKERQG*HHGSESTTIAIGRQ 493 GFSDLRIEENFLKSAVDTDTILNG*IYLCNGDIKP*RG*RRGILGSE*GIYW GRALLFESW**VHRCLGKLCCED*WIYVDFAIYDRCFRVFLVERRIDYHAL*PNKL*ELGQVI*GFKRVFQDPN*R*DLCIAFCGQQSSKERQG*HHGSESTTIAIGR+ Subject 12240 GFSDLRIEENFLKSAVDTDTILNG*IYLCNGDIKP*RG*RRGILGSE*GIYWAGRALLFESW**VHRCLGKLCCED*WIYVDFAIYDRCFRVFLVERRIDYHAL*PNKL*ELGQVI*GFKRVFQDPN*R*DLCIAFCGQQSSKERQG*HHGSESTTIAIGRR 12725
Range 2: 12241 to 12723 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
370.8 bits(803) | 0.0 | 160/161(99%) | 0/161(0%) | Plus/Plus |
Query 9 GSRI*G*KKIF*NPP*IQIRF*MDKYIYVTGILNPNEARDEVFSVVNKGYIGPGGRSFSNRGSKYTVVWENSAARISGFTSTSQSTIDAFAYFLLKGGLTTTLSNPINCENWVRSSKDLSAFFRTLIKGKIYASRSVDSNLPKKDRDDIMEASRRLSPSDA 491 GSRI*G*KKIF*NPP*IQIRF*MDKYIYVTGILNPNEARDEVFSVVNKGYIGPGGRSFS+RGSKYTVVWENSAARISGFTSTSQSTIDAFAYFLLKGGLTTTLSNPINCENWVRSSKDLSAFFRTLIKGKIYASRSVDSNLPKKDRDDIMEASRRLSPSDA Subject 12241 GSRI*G*KKIF*NPP*IQIRF*MDKYIYVTGILNPNEARDEVFSVVNKGYIGPGGRSFSSRGSKYTVVWENSAARISGFTSTSQSTIDAFAYFLLKGGLTTTLSNPINCENWVRSSKDLSAFFRTLIKGKIYASRSVDSNLPKKDRDDIMEASRRLSPSDA 12723
Range 3: 12240 to 12722 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
328.7 bits(711) | 0.0 | 159/161(99%) | 0/161(0%) | Minus/Minus |
Query 8 ASDGDXXXXXXXXXXXXXFGRLLSTERDA*ILPLIRVLKNALKSLDDLTQFSQFIGLESVVVNPPFNKKYAKASIVDCEVDVNPLILAAEFSQTTVYLLPRFEKERPPGPIYPLFTTENTSSLASLGFNIPVT*IYLSIQNRICIYGGFQKIFFYP*IREP 490 ASDGDSRRLASMMSSLSFFGRLLSTERDA*ILPLIRVLKNALKSLDDLTQFSQFIGLESVVVNPPFNKKYAKASIVDCEVDVNPLILAAEFSQTTVYLLPR EKERPPGPIYPLFTTENTSSLASLGFNIPVT*IYLSIQNRICIYGGF KIFFYP*IREP Subject 12240 ASDGDSRRLASMMSSLSFFGRLLSTERDA*ILPLIRVLKNALKSLDDLTQFSQFIGLESVVVNPPFNKKYAKASIVDCEVDVNPLILAAEFSQTTVYLLPRLEKERPPGPIYPLFTTENTSSLASLGFNIPVT*IYLSIQNRICIYGGF*KIFFYP*IREP 12722
Range 4: 12377 to 12721 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
265.5 bits(573) | 0.0 | 114/115(99%) | 0/115(0%) | Minus/Minus |
Query 145 RPMAIVVDSLP*CHPCLSLEDCCPQNAMHKSYL*LGS*KTRLNP*MT*PNSHSLLG*RAW*SIRLSTRNTRKHLS*IAKST*IH*SSQQSFPRQRCTYYHDSKRSALPVQYIPYS 489 RPMAIVVDSLP*CHPCLSLEDCCPQNAMHKSYL*LGS*KTRLNP*MT*PNSHSLLG*RAW*SIRLSTRNTRKHLS*IAKST*IH*SSQQSFPRQRCTYYHDSKRSALP QYIPYS Subject 12377 RPMAIVVDSLP*CHPCLSLEDCCPQNAMHKSYL*LGS*KTRLNP*MT*PNSHSLLG*RAW*SIRLSTRNTRKHLS*IAKST*IH*SSQQSFPRQRCTYYHDSKRSALPAQYIPYS 12721
Range 5: 12233 to 12334 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.0 bits(166) | 0.0 | 33/34(97%) | 0/34(0%) | Minus/Minus |
Query 1 SPLHKYIYPFKIVSVSTADFKKFSSILKSENPKS 102 SPLHKYIYPFKIVSVSTADFKKFSSILKSENP S Subject 12233 SPLHKYIYPFKIVSVSTADFKKFSSILKSENPLS 12334
Range 6: 12514 to 12723 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
167.9 bits(360) | 0.0 | 70/70(100%) | 0/70(0%) | Minus/Minus |
Query 282 GVRWR*SSTRFHDVIPVFLWKIAVHRTRCINLTFN*GPEKRA*ILR*PDPILTVYWVRERGSQSAFQQEI 491 GVRWR*SSTRFHDVIPVFLWKIAVHRTRCINLTFN*GPEKRA*ILR*PDPILTVYWVRERGSQSAFQQEI Subject 12514 GVRWR*SSTRFHDVIPVFLWKIAVHRTRCINLTFN*GPEKRA*ILR*PDPILTVYWVRERGSQSAFQQEI 12723
Range 7: 12238 to 12459 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
166.5 bits(357) | 0.0 | 71/74(96%) | 0/74(0%) | Minus/Minus |
Query 6 SRVFPDNGVLTTTIRKGAPSRSNISLIHYREYLVSSLVRV*YPRYINIFIHSKSYLYLRRISKNFLLSLNPRTP 227 SRVFPDNGVLTTT RKGAPSR NISLIHYREYLVSSLVRV*YPRYINIFIHSKSYLYLRRI KNFLLSLNPRTP Subject 12238 SRVFPDNGVLTTTTRKGAPSRPNISLIHYREYLVSSLVRV*YPRYINIFIHSKSYLYLRRILKNFLLSLNPRTP 12459
Range 8: 12515 to 12724 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
164.2 bits(352) | 0.0 | 70/70(100%) | 0/70(0%) | Plus/Plus |
Query 283 ISC*KAD*LPRSLTQ*TVRIGSGHLRI*ARFSGP*LKVRFMHRVLWTAIFQRKTGMTSWKRVDDYRHRTP 492 ISC*KAD*LPRSLTQ*TVRIGSGHLRI*ARFSGP*LKVRFMHRVLWTAIFQRKTGMTSWKRVDDYRHRTP Subject 12515 ISC*KAD*LPRSLTQ*TVRIGSGHLRI*ARFSGP*LKVRFMHRVLWTAIFQRKTGMTSWKRVDDYRHRTP 12724
Range 9: 12299 to 12454 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
114.7 bits(244) | 0.0 | 50/52(96%) | 0/52(0%) | Plus/Plus |
Query 67 DFEWINIFM*RGY*TLTRLETRYSR**IRDILDREGAPFRIVVVSTPLSGKT 222 DFEWINIFM*RGY*TLTRLETRYSR**IRDIL REGAPFR+VVVSTPLSGKT Subject 12299 DFEWINIFM*RGY*TLTRLETRYSR**IRDILGREGAPFRVVVVSTPLSGKT 12454
Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome
Sequence ID: KX756669.1 Length: 18313 Number of Matches: 9
Range 1: 12055 to 12540 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
375.9 bits(814) | 0.0 | 160/162(99%) | 0/162(0%) | Plus/Plus |
Query 8 GFSDLRIEENFLKSAVDTDTILNG*IYLCNGDIKP*RG*RRGILGSE*GIYWTGRALLFESW**VHRCLGKLCCED*WIYVDFAIYDRCFRVFLVERRIDYHAL*PNKL*ELGQVI*GFKRVFQDPN*R*DLCIAFCGQQSSKERQG*HHGSESTTIAIGRQ 493 GFSDLRIEENFLKSAVDTDTILNG*IYLCNGDIKP*RG*RRGILGSE*GIYW GRALLFESW**VHRCLGKLCCED*WIYVDFAIYDRCFRVFLVERRIDYHAL*PNKL*ELGQVI*GFKRVFQDPN*R*DLCIAFCGQQSSKERQG*HHGSESTTIAIGR+ Subject 12055 GFSDLRIEENFLKSAVDTDTILNG*IYLCNGDIKP*RG*RRGILGSE*GIYWAGRALLFESW**VHRCLGKLCCED*WIYVDFAIYDRCFRVFLVERRIDYHAL*PNKL*ELGQVI*GFKRVFQDPN*R*DLCIAFCGQQSSKERQG*HHGSESTTIAIGRR 12540
Range 2: 12056 to 12538 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
369.5 bits(800) | 0.0 | 160/161(99%) | 0/161(0%) | Plus/Plus |
Query 9 GSRI*G*KKIF*NPP*IQIRF*MDKYIYVTGILNPNEARDEVFSVVNKGYIGPGGRSFSNRGSKYTVVWENSAARISGFTSTSQSTIDAFAYFLLKGGLTTTLSNPINCENWVRSSKDLSAFFRTLIKGKIYASRSVDSNLPKKDRDDIMEASRRLSPSDA 491 GSRI*G*KKIF*NPP*IQIRF*MDKYIYVTGILNPNEARDEVFSVVNK YIGPGGRSFSNRGSKYTVVWENSAARISGFTSTSQSTIDAFAYFLLKGGLTTTLSNPINCENWVRSSKDLSAFFRTLIKGKIYASRSVDSNLPKKDRDDIMEASRRLSPSDA Subject 12056 GSRI*G*KKIF*NPP*IQIRF*MDKYIYVTGILNPNEARDEVFSVVNKEYIGPGGRSFSNRGSKYTVVWENSAARISGFTSTSQSTIDAFAYFLLKGGLTTTLSNPINCENWVRSSKDLSAFFRTLIKGKIYASRSVDSNLPKKDRDDIMEASRRLSPSDA 12538
Range 3: 12055 to 12537 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
327.8 bits(709) | 0.0 | 159/161(99%) | 0/161(0%) | Minus/Minus |
Query 8 ASDGDXXXXXXXXXXXXXFGRLLSTERDA*ILPLIRVLKNALKSLDDLTQFSQFIGLESVVVNPPFNKKYAKASIVDCEVDVNPLILAAEFSQTTVYLLPRFEKERPPGPIYPLFTTENTSSLASLGFNIPVT*IYLSIQNRICIYGGFQKIFFYP*IREP 490 ASDGDSRRLASMMSSLSFFGRLLSTERDA*ILPLIRVLKNALKSLDDLTQFSQFIGLESVVVNPPFNKKYAKASIVDCEVDVNPLILAAEFSQTTVYLLPRFEKERPPGPIY LFTTENTSSLASLGFNIPVT*IYLSIQNRICIYGGF KIFFYP*IREP Subject 12055 ASDGDSRRLASMMSSLSFFGRLLSTERDA*ILPLIRVLKNALKSLDDLTQFSQFIGLESVVVNPPFNKKYAKASIVDCEVDVNPLILAAEFSQTTVYLLPRFEKERPPGPIYSLFTTENTSSLASLGFNIPVT*IYLSIQNRICIYGGF*KIFFYP*IREP 12537
Range 4: 12192 to 12536 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
265.5 bits(573) | 0.0 | 114/115(99%) | 0/115(0%) | Minus/Minus |
Query 145 RPMAIVVDSLP*CHPCLSLEDCCPQNAMHKSYL*LGS*KTRLNP*MT*PNSHSLLG*RAW*SIRLSTRNTRKHLS*IAKST*IH*SSQQSFPRQRCTYYHDSKRSALPVQYIPYS 489 RPMAIVVDSLP*CHPCLSLEDCCPQNAMHKSYL*LGS*KTRLNP*MT*PNSHSLLG*RAW*SIRLSTRNTRKHLS*IAKST*IH*SSQQSFPRQRCTYYHDSKRSALP QYIPYS Subject 12192 RPMAIVVDSLP*CHPCLSLEDCCPQNAMHKSYL*LGS*KTRLNP*MT*PNSHSLLG*RAW*SIRLSTRNTRKHLS*IAKST*IH*SSQQSFPRQRCTYYHDSKRSALPAQYIPYS 12536
Range 5: 12048 to 12149 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.0 bits(166) | 0.0 | 33/34(97%) | 0/34(0%) | Minus/Minus |
Query 1 SPLHKYIYPFKIVSVSTADFKKFSSILKSENPKS 102 SPLHKYIYPFKIVSVSTADFKKFSSILKSENP S Subject 12048 SPLHKYIYPFKIVSVSTADFKKFSSILKSENPLS 12149
Range 6: 12329 to 12538 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
167.9 bits(360) | 0.0 | 70/70(100%) | 0/70(0%) | Minus/Minus |
Query 282 GVRWR*SSTRFHDVIPVFLWKIAVHRTRCINLTFN*GPEKRA*ILR*PDPILTVYWVRERGSQSAFQQEI 491 GVRWR*SSTRFHDVIPVFLWKIAVHRTRCINLTFN*GPEKRA*ILR*PDPILTVYWVRERGSQSAFQQEI Subject 12329 GVRWR*SSTRFHDVIPVFLWKIAVHRTRCINLTFN*GPEKRA*ILR*PDPILTVYWVRERGSQSAFQQEI 12538
Range 7: 12053 to 12274 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
166.0 bits(356) | 0.0 | 71/74(96%) | 0/74(0%) | Minus/Minus |
Query 6 SRVFPDNGVLTTTIRKGAPSRSNISLIHYREYLVSSLVRV*YPRYINIFIHSKSYLYLRRISKNFLLSLNPRTP 227 SRVFPDNGVLTTTIRKGAPSR NI LIHYREYLVSSLVRV*YPRYINIFIHSKSYLYLRRI KNFLLSLNPRTP Subject 12053 SRVFPDNGVLTTTIRKGAPSRPNIFLIHYREYLVSSLVRV*YPRYINIFIHSKSYLYLRRILKNFLLSLNPRTP 12274
Range 8: 12330 to 12539 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
164.2 bits(352) | 0.0 | 70/70(100%) | 0/70(0%) | Plus/Plus |
Query 283 ISC*KAD*LPRSLTQ*TVRIGSGHLRI*ARFSGP*LKVRFMHRVLWTAIFQRKTGMTSWKRVDDYRHRTP 492 ISC*KAD*LPRSLTQ*TVRIGSGHLRI*ARFSGP*LKVRFMHRVLWTAIFQRKTGMTSWKRVDDYRHRTP Subject 12330 ISC*KAD*LPRSLTQ*TVRIGSGHLRI*ARFSGP*LKVRFMHRVLWTAIFQRKTGMTSWKRVDDYRHRTP 12539
Range 9: 12114 to 12269 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.9 bits(240) | 0.0 | 50/52(96%) | 0/52(0%) | Plus/Plus |
Query 67 DFEWINIFM*RGY*TLTRLETRYSR**IRDILDREGAPFRIVVVSTPLSGKT 222 DFEWINIFM*RGY*TLTRLETRYSR**IR+IL REGAPFRIVVVSTPLSGKT Subject 12114 DFEWINIFM*RGY*TLTRLETRYSR**IRNILGREGAPFRIVVVSTPLSGKT 12269
Grapevine leafroll associated virus 3, complete genome
Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 9
Range 1: 11661 to 12146 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
372.7 bits(807) | 0.0 | 160/162(99%) | 0/162(0%) | Plus/Plus |
Query 8 GFSDLRIEENFLKSAVDTDTILNG*IYLCNGDIKP*RG*RRGILGSE*GIYWTGRALLFESW**VHRCLGKLCCED*WIYVDFAIYDRCFRVFLVERRIDYHAL*PNKL*ELGQVI*GFKRVFQDPN*R*DLCIAFCGQQSSKERQG*HHGSESTTIAIGRQ 493 GFSDLRIEENFLKSAVDTDTILNG*IYLCNGDIKP*RG*RRGILGSE*GIYWTGRALLFESW**VHR LGKLCCED*WIYVDFAIYDRCFRVFLVERRIDYHAL*PNKL*ELGQVI*GFKRVFQDPN*R*DLCIAFCGQQSSKERQG*HHGSESTTIAIGR+ Subject 11661 GFSDLRIEENFLKSAVDTDTILNG*IYLCNGDIKP*RG*RRGILGSE*GIYWTGRALLFESW**VHRRLGKLCCED*WIYVDFAIYDRCFRVFLVERRIDYHAL*PNKL*ELGQVI*GFKRVFQDPN*R*DLCIAFCGQQSSKERQG*HHGSESTTIAIGRR 12146
Range 2: 11662 to 12144 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
370.8 bits(803) | 0.0 | 160/161(99%) | 0/161(0%) | Plus/Plus |
Query 9 GSRI*G*KKIF*NPP*IQIRF*MDKYIYVTGILNPNEARDEVFSVVNKGYIGPGGRSFSNRGSKYTVVWENSAARISGFTSTSQSTIDAFAYFLLKGGLTTTLSNPINCENWVRSSKDLSAFFRTLIKGKIYASRSVDSNLPKKDRDDIMEASRRLSPSDA 491 GSRI*G*KKIF*NPP*IQ RF*MDKYIYVTGILNPNEARDEVFSVVNKGYIGPGGRSFSNRGSKYTVVWENSAARISGFTSTSQSTIDAFAYFLLKGGLTTTLSNPINCENWVRSSKDLSAFFRTLIKGKIYASRSVDSNLPKKDRDDIMEASRRLSPSDA Subject 11662 GSRI*G*KKIF*NPP*IQTRF*MDKYIYVTGILNPNEARDEVFSVVNKGYIGPGGRSFSNRGSKYTVVWENSAARISGFTSTSQSTIDAFAYFLLKGGLTTTLSNPINCENWVRSSKDLSAFFRTLIKGKIYASRSVDSNLPKKDRDDIMEASRRLSPSDA 12144
Range 3: 11661 to 12143 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
331.0 bits(716) | 0.0 | 159/161(99%) | 0/161(0%) | Minus/Minus |
Query 8 ASDGDXXXXXXXXXXXXXFGRLLSTERDA*ILPLIRVLKNALKSLDDLTQFSQFIGLESVVVNPPFNKKYAKASIVDCEVDVNPLILAAEFSQTTVYLLPRFEKERPPGPIYPLFTTENTSSLASLGFNIPVT*IYLSIQNRICIYGGFQKIFFYP*IREP 490 ASDGDSRRLASMMSSLSFFGRLLSTERDA*ILPLIRVLKNALKSLDDLTQFSQFIGLESVVVNPPFNKKYAKASIVDCEVDVNPLILAAEFSQTTVYLLPRFEKERPPGPIYPLFTTENTSSLASLGFNIPVT*IYLSIQNR+CIYGGF KIFFYP*IREP Subject 11661 ASDGDSRRLASMMSSLSFFGRLLSTERDA*ILPLIRVLKNALKSLDDLTQFSQFIGLESVVVNPPFNKKYAKASIVDCEVDVNPLILAAEFSQTTVYLLPRFEKERPPGPIYPLFTTENTSSLASLGFNIPVT*IYLSIQNRVCIYGGF*KIFFYP*IREP 12143
Range 4: 11798 to 12142 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
265.5 bits(573) | 0.0 | 114/115(99%) | 0/115(0%) | Minus/Minus |
Query 145 RPMAIVVDSLP*CHPCLSLEDCCPQNAMHKSYL*LGS*KTRLNP*MT*PNSHSLLG*RAW*SIRLSTRNTRKHLS*IAKST*IH*SSQQSFPRQRCTYYHDSKRSALPVQYIPYS 489 RPMAIVVDSLP*CHPCLSLEDCCPQNAMHKSYL*LGS*KTRLNP*MT*PNSHSLLG*RAW*SIRLSTRNTRKHLS*IAKST*IH*SSQQSFPR+RCTYYHDSKRSALPVQYIPYS Subject 11798 RPMAIVVDSLP*CHPCLSLEDCCPQNAMHKSYL*LGS*KTRLNP*MT*PNSHSLLG*RAW*SIRLSTRNTRKHLS*IAKST*IH*SSQQSFPRRRCTYYHDSKRSALPVQYIPYS 12142
Range 5: 11654 to 11755 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.0 bits(166) | 0.0 | 33/34(97%) | 0/34(0%) | Minus/Minus |
Query 1 SPLHKYIYPFKIVSVSTADFKKFSSILKSENPKS 102 SPLHKYIYPFKIVSVSTADFKKFSSILKSENP S Subject 11654 SPLHKYIYPFKIVSVSTADFKKFSSILKSENPLS 11755
Range 6: 11935 to 12144 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
167.9 bits(360) | 0.0 | 70/70(100%) | 0/70(0%) | Minus/Minus |
Query 282 GVRWR*SSTRFHDVIPVFLWKIAVHRTRCINLTFN*GPEKRA*ILR*PDPILTVYWVRERGSQSAFQQEI 491 GVRWR*SSTRFHDVIPVFLWKIAVHRTRCINLTFN*GPEKRA*ILR*PDPILTVYWVRERGSQSAFQQEI Subject 11935 GVRWR*SSTRFHDVIPVFLWKIAVHRTRCINLTFN*GPEKRA*ILR*PDPILTVYWVRERGSQSAFQQEI 12144
Range 7: 11659 to 11880 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
164.6 bits(353) | 0.0 | 71/74(96%) | 0/74(0%) | Minus/Minus |
Query 6 SRVFPDNGVLTTTIRKGAPSRSNISLIHYREYLVSSLVRV*YPRYINIFIHSKSYLYLRRISKNFLLSLNPRTP 227 SRVFPD+GVLTTTIRKGAPSRSNISLIHYREYLVSSLVRV*YPRYINIFIHSKS LYLRRI KNFLLSLNPRTP Subject 11659 SRVFPDDGVLTTTIRKGAPSRSNISLIHYREYLVSSLVRV*YPRYINIFIHSKSCLYLRRILKNFLLSLNPRTP 11880
Range 8: 11936 to 12145 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
164.2 bits(352) | 0.0 | 70/70(100%) | 0/70(0%) | Plus/Plus |
Query 283 ISC*KAD*LPRSLTQ*TVRIGSGHLRI*ARFSGP*LKVRFMHRVLWTAIFQRKTGMTSWKRVDDYRHRTP 492 ISC*KAD*LPRSLTQ*TVRIGSGHLRI*ARFSGP*LKVRFMHRVLWTAIFQRKTGMTSWKRVDDYRHRTP Subject 11936 ISC*KAD*LPRSLTQ*TVRIGSGHLRI*ARFSGP*LKVRFMHRVLWTAIFQRKTGMTSWKRVDDYRHRTP 12145
Range 9: 11720 to 11875 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
115.6 bits(246) | 0.0 | 51/52(98%) | 0/52(0%) | Plus/Plus |
Query 67 DFEWINIFM*RGY*TLTRLETRYSR**IRDILDREGAPFRIVVVSTPLSGKT 222 DFEWINIFM*RGY*TLTRLETRYSR**IRDILDREGAPFRIVVVSTP SGKT Subject 11720 DFEWINIFM*RGY*TLTRLETRYSR**IRDILDREGAPFRIVVVSTPSSGKT 11875
Nucleotide Sequence (106 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
83.5 | 283.3 | 34% | 1.532e-15 | 100% | AJ748527.1 | |
83.5 | 283.3 | 34% | 1.532e-15 | 100% | AJ748528.1 | |
83.5 | 283.3 | 34% | 1.532e-15 | 100% | AJ748529.1 | |
83.5 | 283.3 | 34% | 1.532e-15 | 100% | AJ748533.1 | |
83.5 | 283.3 | 34% | 1.532e-15 | 100% | JX559645.1 |
Alignments
Grapevine leafroll associated virus 3 partial mRNA for RNA dependent RNA polymerase (RdRp gene), isolate TU 16
Sequence ID: AJ748527.1 Length: 653 Number of Matches: 4
Range 1: 487 to 591 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
83.5 bits(176) | 0.0 | 35/35(100%) | 0/35(0%) | Plus/Minus |
Query 2 SEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT 106 SEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT Subject 487 SEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT 591
Range 2: 489 to 590 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.5 bits(165) | 0.0 | 34/34(100%) | 0/34(0%) | Minus/Plus |
Query 3 SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVL 104 SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVL Subject 489 SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVL 590
Grapevine leafroll associated virus 3 partial mRNA for RNA dependent RNA polymerase (RdRp gene), isolate AA 10
Sequence ID: AJ748528.1 Length: 653 Number of Matches: 4
Range 1: 487 to 591 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
83.5 bits(176) | 0.0 | 35/35(100%) | 0/35(0%) | Plus/Minus |
Query 2 SEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT 106 SEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT Subject 487 SEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT 591
Range 2: 489 to 590 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.5 bits(165) | 0.0 | 34/34(100%) | 0/34(0%) | Minus/Plus |
Query 3 SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVL 104 SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVL Subject 489 SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVL 590
Grapevine leafroll associated virus 3 partial mRNA for RNA dependent RNA polymerase (RdRp gene), isolate FR 1
Sequence ID: AJ748529.1 Length: 653 Number of Matches: 4
Range 1: 487 to 591 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
83.5 bits(176) | 0.0 | 35/35(100%) | 0/35(0%) | Plus/Minus |
Query 2 SEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT 106 SEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT Subject 487 SEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT 591
Range 2: 489 to 590 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.5 bits(165) | 0.0 | 34/34(100%) | 0/34(0%) | Minus/Plus |
Query 3 SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVL 104 SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVL Subject 489 SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVL 590
Grapevine leafroll associated virus 3 partial mRNA for RNA dependent RNA polymerase (RdRp gene), isolate C 6 1
Sequence ID: AJ748533.1 Length: 653 Number of Matches: 4
Range 1: 487 to 591 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
83.5 bits(176) | 0.0 | 35/35(100%) | 0/35(0%) | Plus/Minus |
Query 2 SEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT 106 SEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT Subject 487 SEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT 591
Range 2: 489 to 590 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.5 bits(165) | 0.0 | 34/34(100%) | 0/34(0%) | Minus/Plus |
Query 3 SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVL 104 SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVL Subject 489 SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVL 590
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 4
Range 1: 8489 to 8593 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
83.5 bits(176) | 0.0 | 35/35(100%) | 0/35(0%) | Plus/Minus |
Query 2 SEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT 106 SEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT Subject 8489 SEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*VLRT 8593
Range 2: 8491 to 8592 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.5 bits(165) | 0.0 | 34/34(100%) | 0/34(0%) | Minus/Plus |
Query 3 SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVL 104 SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVL Subject 8491 SVVLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVL 8592
Nucleotide Sequence (345 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
255.4 | 1333.1 | 25% | 2.091e-66 | 92% | LN851187.1 | |
255.4 | 1375.2 | 25% | 2.091e-66 | 97% | EU259806.1 | |
255.4 | 1362.9 | 25% | 2.091e-66 | 95% | KX756668.1 | |
252.6 | 1350.0 | 25% | 1.406e-65 | 95% | HQ130283.1 | |
252.6 | 1350.0 | 25% | 1.406e-65 | 95% | HQ130285.1 |
Alignments
Grapevine leafroll associated virus 3 ORF7 gene for divergent coat protein, isolate K2
Sequence ID: LN851187.1 Length: 1434 Number of Matches: 7
Range 1: 273 to 611 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
255.4 bits(551) | 0.0 | 111/113(98%) | 0/113(0%) | Plus/Minus |
Query 3 DLISITFSFGLEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTEVCAAPPTISTCNTYDDSFQLFDE*FLPVVISTPLPPMYFLQKTTSRPKYGLL*HTPHSK*SP 341 DLISITFSF LEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTEVCA PPTISTCNTYDDSFQLFDE*FLPVVISTPLPPMYFLQKTTSRPKYGLL*HTPHSK*SP Subject 273 DLISITFSFELEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTEVCAVPPTISTCNTYDDSFQLFDE*FLPVVISTPLPPMYFLQKTTSRPKYGLL*HTPHSK*SP 611
Range 2: 274 to 612 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
235.2 bits(507) | 0.0 | 109/113(96%) | 0/113(0%) | Minus/Plus |
Query 2 GDYFECGVCHNKPYLGREVVFCRKYIGGRGVEITTGKXXXXXXXXXXXYVLHVDIVGGAAQTSVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSSPKLNVMLIRS 340 GDYFECGVCHNKPYLGREVVFC+KYIGGRGVEITTGKNYSSNNWNESSYVL VDIVGG AQTSVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSS KLNVMLIRS Subject 274 GDYFECGVCHNKPYLGREVVFCKKYIGGRGVEITTGKNYSSNNWNESSYVLQVDIVGGTAQTSVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSSSKLNVMLIRS 612
Range 3: 274 to 612 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
220.5 bits(475) | 0.0 | 109/113(96%) | 0/113(0%) | Plus/Minus |
Query 2 *PYKHYIQFRA*ETTRVEVLIYGHYLRYLVDTRPVFG*TTNVRLRISRIN*GLCRPTDYIHM*YXXXXXXXXXXXXXTSGDLHSSPTYVFPTEDDFPS*VRFVMTHAALEVIS 340 *PYKHY+QFRA*ETTRVEVLIYGHYLRYLVDTRPVFG*TTNVRLRISRIN*GLC PTDYIH+*YVRRLVPVVRRVVLTSGDLHSSPTYVF TEDDFPS*VRFVMTHAALEVIS Subject 274 *PYKHYVQFRA*ETTRVEVLIYGHYLRYLVDTRPVFG*TTNVRLRISRIN*GLCXPTDYIHL*YVRRLVPVVRRVVLTSGDLHSSPTYVFLTEDDFPS*VRFVMTHAALEVIS 612
Range 4: 269 to 613 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
219.6 bits(473) | 0.0 | 110/115(96%) | 0/115(0%) | Plus/Minus |
Query 1 VTL*ALHSVSGLRNNQGRGSDLRTLSSLSCRYASSFWVDH*RPFAYK*N*LRSVPPHRLYPHVIXXXXXXXXXXXXXYQW*SPLLSHLCISYRRRLPVLSTVCYDTRRTRSNLPR 345 VTL*AL SVS LRNNQGRGSDLRTLSSLSCRYASSFWVDH*RPFAYK*N*LRSV HRLYP VIRTTTRSSCSTSSSYQW*SPLLSHLCISYRRRLPVLSTVCYDTRRTRSNLPR Subject 269 VTL*ALRSVSSLRNNQGRGSDLRTLSSLSCRYASSFWVDH*RPFAYK*N*LRSVXSHRLYPLVIRTTTRSSCSTSSSYQW*SPLLSHLCISYRRRLPVLSTVCYDTRRTRSNLPR 613
Range 5: 269 to 613 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
207.3 bits(446) | 0.0 | 110/115(96%) | 0/115(0%) | Minus/Plus |
Query 1 TREITSSAACVITNRT*DGKSSSVGNT*VGEEWRSPLVXXXXXXXXXXXXTYYMWI*SVGRHRPQLILLIRKRTLVVYPKTGRVSTR*RR*CP*IRTSTLVVSQARN*M*CL*GH 345 T EITSSAACVITNRT*DGKSSSV NT*VGEEWRSPLVRTTRRTTGTSRRTYY WI*SVG HRPQLILLIRKRTLVVYPKTGRVSTR*RR*CP*IRTSTLVVSQARN* *CL*GH Subject 269 TGEITSSAACVITNRT*DGKSSSVRNT*VGEEWRSPLVRTTRRTTGTSRRTYYKWI*SVGXHRPQLILLIRKRTLVVYPKTGRVSTR*RR*CP*IRTSTLVVSQARN*T*CL*GH 613
Range 6: 423 to 611 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
139.4 bits(298) | 0.0 | 58/63(92%) | 0/63(0%) | Minus/Plus |
Query 3 ITCGYSRWGGTDLS*FYLYANGR*WSTQKLDAYLQDNEDSVRRSEPLPWLFLKPETECNAYKV 191 IT GYSRW TDLS*FYLYANGR*WSTQKLDAYLQDNEDSVRRSEPLPWLFLK ETE NAYKV Subject 423 ITSGYSRWDXTDLS*FYLYANGR*WSTQKLDAYLQDNEDSVRRSEPLPWLFLKLETERNAYKV 611
Grapevine leafroll associated virus 3 isolate GP18, complete genome
Sequence ID: EU259806.1 Length: 18498 Number of Matches: 7
Range 1: 15124 to 15462 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
255.4 bits(551) | 0.0 | 111/113(98%) | 0/113(0%) | Plus/Minus |
Query 3 DLISITFSFGLEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTEVCAAPPTISTCNTYDDSFQLFDE*FLPVVISTPLPPMYFLQKTTSRPKYGLL*HTPHSK*SP 341 DLISITFSF LEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTEVCA PPTISTCNTYDDSFQLFDE*FLPVVISTPLPPMYFLQKTTSRPKYGLL*HTPHSK*SP Subject 15124 DLISITFSFELEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTEVCAVPPTISTCNTYDDSFQLFDE*FLPVVISTPLPPMYFLQKTTSRPKYGLL*HTPHSK*SP 15462
Range 2: 15125 to 15463 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
238.9 bits(515) | 0.0 | 110/113(97%) | 0/113(0%) | Minus/Plus |
Query 2 GDYFECGVCHNKPYLGREVVFCRKYIGGRGVEITTGKXXXXXXXXXXXYVLHVDIVGGAAQTSVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSSPKLNVMLIRS 340 GDYFECGVCHNKPYLGREVVFC+KYIGGRGVEITTGKNYSSNNWNESSYVLHVDIVGG AQTSVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSS KLNVMLIRS Subject 15125 GDYFECGVCHNKPYLGREVVFCKKYIGGRGVEITTGKNYSSNNWNESSYVLHVDIVGGTAQTSVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSSSKLNVMLIRS 15463
Range 3: 15120 to 15464 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
232.0 bits(500) | 0.0 | 113/115(98%) | 0/115(0%) | Plus/Minus |
Query 1 VTL*ALHSVSGLRNNQGRGSDLRTLSSLSCRYASSFWVDH*RPFAYK*N*LRSVPPHRLYPHVIXXXXXXXXXXXXXYQW*SPLLSHLCISYRRRLPVLSTVCYDTRRTRSNLPR 345 VTL*ALHSVS LRNNQGRGSDLRTLSSLSCRYASSFWVDH*RPFAYK*N*LRSVP HRLYPHVIRTTTRSSCSTSSSYQW*SPLLSHLCISYRRRLPVLSTVCYDTRRTRSNLPR Subject 15120 VTL*ALHSVSSLRNNQGRGSDLRTLSSLSCRYASSFWVDH*RPFAYK*N*LRSVPSHRLYPHVIRTTTRSSCSTSSSYQW*SPLLSHLCISYRRRLPVLSTVCYDTRRTRSNLPR 15464
Range 4: 15125 to 15463 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
225.1 bits(485) | 0.0 | 112/113(99%) | 0/113(0%) | Plus/Minus |
Query 2 *PYKHYIQFRA*ETTRVEVLIYGHYLRYLVDTRPVFG*TTNVRLRISRIN*GLCRPTDYIHM*YXXXXXXXXXXXXXTSGDLHSSPTYVFPTEDDFPS*VRFVMTHAALEVIS 340 *PYKHYIQFRA*ETTRVEVLIYGHYLRYLVDTRPVFG*TTNVRLRISRIN*GLCRPTDYIHM*YVRRLVPVVRRVVLTSGDLHSSPTYVF TEDDFPS*VRFVMTHAALEVIS Subject 15125 *PYKHYIQFRA*ETTRVEVLIYGHYLRYLVDTRPVFG*TTNVRLRISRIN*GLCRPTDYIHM*YVRRLVPVVRRVVLTSGDLHSSPTYVFLTEDDFPS*VRFVMTHAALEVIS 15463
Range 5: 15120 to 15464 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
215.5 bits(464) | 0.0 | 113/115(98%) | 0/115(0%) | Minus/Plus |
Query 1 TREITSSAACVITNRT*DGKSSSVGNT*VGEEWRSPLVXXXXXXXXXXXXTYYMWI*SVGRHRPQLILLIRKRTLVVYPKTGRVSTR*RR*CP*IRTSTLVVSQARN*M*CL*GH 345 T EITSSAACVITNRT*DGKSSSV NT*VGEEWRSPLVRTTRRTTGTSRRTYYMWI*SVGRHRPQLILLIRKRTLVVYPKTGRVSTR*RR*CP*IRTSTLVVSQARN*M*CL*GH Subject 15120 TGEITSSAACVITNRT*DGKSSSVRNT*VGEEWRSPLVRTTRRTTGTSRRTYYMWI*SVGRHRPQLILLIRKRTLVVYPKTGRVSTR*RR*CP*IRTSTLVVSQARN*M*CL*GH 15464
Range 6: 15274 to 15462 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
152.7 bits(327) | 0.0 | 61/63(97%) | 0/63(0%) | Minus/Plus |
Query 3 ITCGYSRWGGTDLS*FYLYANGR*WSTQKLDAYLQDNEDSVRRSEPLPWLFLKPETECNAYKV 191 ITCGYSRW GTDLS*FYLYANGR*WSTQKLDAYLQDNEDSVRRSEPLPWLFLK ETECNAYKV Subject 15274 ITCGYSRWDGTDLS*FYLYANGR*WSTQKLDAYLQDNEDSVRRSEPLPWLFLKLETECNAYKV 15462
Grapevine leafroll associated virus 3 isolate TC BR, complete genome
Sequence ID: KX756668.1 Length: 18498 Number of Matches: 7
Range 1: 15124 to 15462 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
255.4 bits(551) | 0.0 | 111/113(98%) | 0/113(0%) | Plus/Minus |
Query 3 DLISITFSFGLEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTEVCAAPPTISTCNTYDDSFQLFDE*FLPVVISTPLPPMYFLQKTTSRPKYGLL*HTPHSK*SP 341 DLISITFSF LEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTEVCA PPTISTCNTYDDSFQLFDE*FLPVVISTPLPPMYFLQKTTSRPKYGLL*HTPHSK*SP Subject 15124 DLISITFSFELEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTEVCAVPPTISTCNTYDDSFQLFDE*FLPVVISTPLPPMYFLQKTTSRPKYGLL*HTPHSK*SP 15462
Range 2: 15125 to 15463 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
238.9 bits(515) | 0.0 | 110/113(97%) | 0/113(0%) | Minus/Plus |
Query 2 GDYFECGVCHNKPYLGREVVFCRKYIGGRGVEITTGKXXXXXXXXXXXYVLHVDIVGGAAQTSVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSSPKLNVMLIRS 340 GDYFECGVCHNKPYLGREVVFC+KYIGGRGVEITTGKNYSSNNWNESSYVLHVDIVGG AQTSVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSS KLNVMLIRS Subject 15125 GDYFECGVCHNKPYLGREVVFCKKYIGGRGVEITTGKNYSSNNWNESSYVLHVDIVGGTAQTSVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSSSKLNVMLIRS 15463
Range 3: 15120 to 15464 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
228.3 bits(492) | 0.0 | 112/115(97%) | 0/115(0%) | Plus/Minus |
Query 1 VTL*ALHSVSGLRNNQGRGSDLRTLSSLSCRYASSFWVDH*RPFAYK*N*LRSVPPHRLYPHVIXXXXXXXXXXXXXYQW*SPLLSHLCISYRRRLPVLSTVCYDTRRTRSNLPR 345 VTL*AL SVS LRNNQGRGSDLRTLSSLSCRYASSFWVDH*RPFAYK*N*LRSVP HRLYPHVIRTTTRSSCSTSSSYQW*SPLLSHLCISYRRRLPVLSTVCYDTRRTRSNLPR Subject 15120 VTL*ALRSVSSLRNNQGRGSDLRTLSSLSCRYASSFWVDH*RPFAYK*N*LRSVPSHRLYPHVIRTTTRSSCSTSSSYQW*SPLLSHLCISYRRRLPVLSTVCYDTRRTRSNLPR 15464
Range 4: 15125 to 15463 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
224.7 bits(484) | 0.0 | 111/113(98%) | 0/113(0%) | Plus/Minus |
Query 2 *PYKHYIQFRA*ETTRVEVLIYGHYLRYLVDTRPVFG*TTNVRLRISRIN*GLCRPTDYIHM*YXXXXXXXXXXXXXTSGDLHSSPTYVFPTEDDFPS*VRFVMTHAALEVIS 340 *PYKHY+QFRA*ETTRVEVLIYGHYLRYLVDTRPVFG*TTNVRLRISRIN*GLCRPTDYIHM*YVRRLVPVVRRVVLTSGDLHSSPTYVF TEDDFPS*VRFVMTHAALEVIS Subject 15125 *PYKHYVQFRA*ETTRVEVLIYGHYLRYLVDTRPVFG*TTNVRLRISRIN*GLCRPTDYIHM*YVRRLVPVVRRVVLTSGDLHSSPTYVFLTEDDFPS*VRFVMTHAALEVIS 15463
Range 5: 15120 to 15464 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
212.8 bits(458) | 0.0 | 112/115(97%) | 0/115(0%) | Minus/Plus |
Query 1 TREITSSAACVITNRT*DGKSSSVGNT*VGEEWRSPLVXXXXXXXXXXXXTYYMWI*SVGRHRPQLILLIRKRTLVVYPKTGRVSTR*RR*CP*IRTSTLVVSQARN*M*CL*GH 345 T EITSSAACVITNRT*DGKSSSV NT*VGEEWRSPLVRTTRRTTGTSRRTYYMWI*SVGRHRPQLILLIRKRTLVVYPKTGRVSTR*RR*CP*IRTSTLVVSQARN* *CL*GH Subject 15120 TGEITSSAACVITNRT*DGKSSSVRNT*VGEEWRSPLVRTTRRTTGTSRRTYYMWI*SVGRHRPQLILLIRKRTLVVYPKTGRVSTR*RR*CP*IRTSTLVVSQARN*T*CL*GH 15464
Range 6: 15274 to 15462 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
147.2 bits(315) | 0.0 | 60/63(95%) | 0/63(0%) | Minus/Plus |
Query 3 ITCGYSRWGGTDLS*FYLYANGR*WSTQKLDAYLQDNEDSVRRSEPLPWLFLKPETECNAYKV 191 ITCGYSRW GTDLS*FYLYANGR*WSTQKLDAYLQDNEDSVRRSEPLPWLFLK ETE NAYKV Subject 15274 ITCGYSRWDGTDLS*FYLYANGR*WSTQKLDAYLQDNEDSVRRSEPLPWLFLKLETERNAYKV 15462
Grapevine leafroll associated virus 3 isolate 3 3 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130283.1 Length: 4711 Number of Matches: 7
Range 1: 1393 to 1731 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
252.6 bits(545) | 0.0 | 110/113(97%) | 0/113(0%) | Plus/Minus |
Query 3 DLISITFSFGLEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTEVCAAPPTISTCNTYDDSFQLFDE*FLPVVISTPLPPMYFLQKTTSRPKYGLL*HTPHSK*SP 341 DLISITFSF LEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTEVCA PPTI TCNTYDDSFQLFDE*FLPVVISTPLPPMYFLQKTTSRPKYGLL*HTPHSK*SP Subject 1393 DLISITFSFELEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTEVCAVPPTIFTCNTYDDSFQLFDE*FLPVVISTPLPPMYFLQKTTSRPKYGLL*HTPHSK*SP 1731
Range 2: 1394 to 1732 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
236.6 bits(510) | 0.0 | 109/113(96%) | 0/113(0%) | Minus/Plus |
Query 2 GDYFECGVCHNKPYLGREVVFCRKYIGGRGVEITTGKXXXXXXXXXXXYVLHVDIVGGAAQTSVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSSPKLNVMLIRS 340 GDYFECGVCHNKPYLGREVVFC+KYIGGRGVEITTGKNYSSNNWNESSYVLHV+IVGG AQTSVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSS KLNVMLIRS Subject 1394 GDYFECGVCHNKPYLGREVVFCKKYIGGRGVEITTGKNYSSNNWNESSYVLHVNIVGGTAQTSVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSSSKLNVMLIRS 1732
Range 3: 1389 to 1733 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
226.0 bits(487) | 0.0 | 111/115(97%) | 0/115(0%) | Plus/Minus |
Query 1 VTL*ALHSVSGLRNNQGRGSDLRTLSSLSCRYASSFWVDH*RPFAYK*N*LRSVPPHRLYPHVIXXXXXXXXXXXXXYQW*SPLLSHLCISYRRRLPVLSTVCYDTRRTRSNLPR 345 VTL*ALHSVS LRNNQGRGSDLRTLSSLSCRYASSFWVDH*RPFAYK*N*LRSVP HRLY HVIRTTTRSSCSTSSSYQW*SPLLSHLCISYRRRLPVLSTVCYDT RTRSNLPR Subject 1389 VTL*ALHSVSSLRNNQGRGSDLRTLSSLSCRYASSFWVDH*RPFAYK*N*LRSVPSHRLYSHVIRTTTRSSCSTSSSYQW*SPLLSHLCISYRRRLPVLSTVCYDTHRTRSNLPR 1733
Range 4: 1394 to 1732 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
223.3 bits(481) | 0.0 | 111/113(98%) | 0/113(0%) | Plus/Minus |
Query 2 *PYKHYIQFRA*ETTRVEVLIYGHYLRYLVDTRPVFG*TTNVRLRISRIN*GLCRPTDYIHM*YXXXXXXXXXXXXXTSGDLHSSPTYVFPTEDDFPS*VRFVMTHAALEVIS 340 *PYKHYIQFRA*ETTRVEVLIYGHYLRYLVDTRPVFG*TTNVRLRISRIN*GLCRPTDYIHM*YVRRLVPVVRRVVLTSGDLHSSPTYVF TEDDFPS*VRFVMTH ALEVIS Subject 1394 *PYKHYIQFRA*ETTRVEVLIYGHYLRYLVDTRPVFG*TTNVRLRISRIN*GLCRPTDYIHM*YVRRLVPVVRRVVLTSGDLHSSPTYVFLTEDDFPS*VRFVMTHTALEVIS 1732
Range 5: 1389 to 1733 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
206.8 bits(445) | 0.0 | 111/115(97%) | 0/115(0%) | Minus/Plus |
Query 1 TREITSSAACVITNRT*DGKSSSVGNT*VGEEWRSPLVXXXXXXXXXXXXTYYMWI*SVGRHRPQLILLIRKRTLVVYPKTGRVSTR*RR*CP*IRTSTLVVSQARN*M*CL*GH 345 T EITSSA CVITNRT*DGKSSSV NT*VGEEWRSPLVRTTRRTTGTSRRTYYM I*SVGRHRPQLILLIRKRTLVVYPKTGRVSTR*RR*CP*IRTSTLVVSQARN*M*CL*GH Subject 1389 TGEITSSAVCVITNRT*DGKSSSVRNT*VGEEWRSPLVRTTRRTTGTSRRTYYM*I*SVGRHRPQLILLIRKRTLVVYPKTGRVSTR*RR*CP*IRTSTLVVSQARN*M*CL*GH 1733
Range 6: 1543 to 1731 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
149.1 bits(319) | 0.0 | 60/63(95%) | 0/63(0%) | Minus/Plus |
Query 3 ITCGYSRWGGTDLS*FYLYANGR*WSTQKLDAYLQDNEDSVRRSEPLPWLFLKPETECNAYKV 191 ITC YSRW GTDLS*FYLYANGR*WSTQKLDAYLQDNEDSVRRSEPLPWLFLK ETECNAYKV Subject 1543 ITCEYSRWDGTDLS*FYLYANGR*WSTQKLDAYLQDNEDSVRRSEPLPWLFLKLETECNAYKV 1731
Grapevine leafroll associated virus 3 isolate 3 7 coat protein, divergent coat protein, 21 kDa protein, 19.6 kDa protein, 19.7 kDa protein, 4 kDa protein, and 7 kDa protein genes, complete cds
Sequence ID: HQ130285.1 Length: 4711 Number of Matches: 7
Range 1: 1393 to 1731 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
252.6 bits(545) | 0.0 | 110/113(97%) | 0/113(0%) | Plus/Minus |
Query 3 DLISITFSFGLEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTEVCAAPPTISTCNTYDDSFQLFDE*FLPVVISTPLPPMYFLQKTTSRPKYGLL*HTPHSK*SP 341 DLISITFSF LEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTEVCA PPTI TCNTYDDSFQLFDE*FLPVVISTPLPPMYFLQKTTSRPKYGLL*HTPHSK*SP Subject 1393 DLISITFSFELEKQPG*RF*STDTIFVIL*IRVQFLGRPLTSVCV*VELTEVCAVPPTIFTCNTYDDSFQLFDE*FLPVVISTPLPPMYFLQKTTSRPKYGLL*HTPHSK*SP 1731
Range 2: 1394 to 1732 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
236.6 bits(510) | 0.0 | 109/113(96%) | 0/113(0%) | Minus/Plus |
Query 2 GDYFECGVCHNKPYLGREVVFCRKYIGGRGVEITTGKXXXXXXXXXXXYVLHVDIVGGAAQTSVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSSPKLNVMLIRS 340 GDYFECGVCHNKPYLGREVVFC+KYIGGRGVEITTGKNYSSNNWNESSYVLHV+IVGG AQTSVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSS KLNVMLIRS Subject 1394 GDYFECGVCHNKPYLGREVVFCKKYIGGRGVEITTGKNYSSNNWNESSYVLHVNIVGGTAQTSVNSTYTQTDVSGLPKNWTRIYKITKIVSVDQNLYPGCFSSSKLNVMLIRS 1732
Range 3: 1389 to 1733 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
226.0 bits(487) | 0.0 | 111/115(97%) | 0/115(0%) | Plus/Minus |
Query 1 VTL*ALHSVSGLRNNQGRGSDLRTLSSLSCRYASSFWVDH*RPFAYK*N*LRSVPPHRLYPHVIXXXXXXXXXXXXXYQW*SPLLSHLCISYRRRLPVLSTVCYDTRRTRSNLPR 345 VTL*ALHSVS LRNNQGRGSDLRTLSSLSCRYASSFWVDH*RPFAYK*N*LRSVP HRLY HVIRTTTRSSCSTSSSYQW*SPLLSHLCISYRRRLPVLSTVCYDT RTRSNLPR Subject 1389 VTL*ALHSVSSLRNNQGRGSDLRTLSSLSCRYASSFWVDH*RPFAYK*N*LRSVPSHRLYSHVIRTTTRSSCSTSSSYQW*SPLLSHLCISYRRRLPVLSTVCYDTHRTRSNLPR 1733
Range 4: 1394 to 1732 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
223.3 bits(481) | 0.0 | 111/113(98%) | 0/113(0%) | Plus/Minus |
Query 2 *PYKHYIQFRA*ETTRVEVLIYGHYLRYLVDTRPVFG*TTNVRLRISRIN*GLCRPTDYIHM*YXXXXXXXXXXXXXTSGDLHSSPTYVFPTEDDFPS*VRFVMTHAALEVIS 340 *PYKHYIQFRA*ETTRVEVLIYGHYLRYLVDTRPVFG*TTNVRLRISRIN*GLCRPTDYIHM*YVRRLVPVVRRVVLTSGDLHSSPTYVF TEDDFPS*VRFVMTH ALEVIS Subject 1394 *PYKHYIQFRA*ETTRVEVLIYGHYLRYLVDTRPVFG*TTNVRLRISRIN*GLCRPTDYIHM*YVRRLVPVVRRVVLTSGDLHSSPTYVFLTEDDFPS*VRFVMTHTALEVIS 1732
Range 5: 1389 to 1733 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
206.8 bits(445) | 0.0 | 111/115(97%) | 0/115(0%) | Minus/Plus |
Query 1 TREITSSAACVITNRT*DGKSSSVGNT*VGEEWRSPLVXXXXXXXXXXXXTYYMWI*SVGRHRPQLILLIRKRTLVVYPKTGRVSTR*RR*CP*IRTSTLVVSQARN*M*CL*GH 345 T EITSSA CVITNRT*DGKSSSV NT*VGEEWRSPLVRTTRRTTGTSRRTYYM I*SVGRHRPQLILLIRKRTLVVYPKTGRVSTR*RR*CP*IRTSTLVVSQARN*M*CL*GH Subject 1389 TGEITSSAVCVITNRT*DGKSSSVRNT*VGEEWRSPLVRTTRRTTGTSRRTYYM*I*SVGRHRPQLILLIRKRTLVVYPKTGRVSTR*RR*CP*IRTSTLVVSQARN*M*CL*GH 1733
Range 6: 1543 to 1731 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
149.1 bits(319) | 0.0 | 60/63(95%) | 0/63(0%) | Minus/Plus |
Query 3 ITCGYSRWGGTDLS*FYLYANGR*WSTQKLDAYLQDNEDSVRRSEPLPWLFLKPETECNAYKV 191 ITC YSRW GTDLS*FYLYANGR*WSTQKLDAYLQDNEDSVRRSEPLPWLFLK ETECNAYKV Subject 1543 ITCEYSRWDGTDLS*FYLYANGR*WSTQKLDAYLQDNEDSVRRSEPLPWLFLKLETECNAYKV 1731
Nucleotide Sequence (673 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
482.2 | 2761.4 | 34% | 3.027e-134 | 79% | KX756669.1 | |
479.9 | 2753.7 | 34% | 1.481e-133 | 79% | GQ352631.1 | |
479.0 | 2725.1 | 34% | 2.796e-133 | 79% | JX559645.1 | |
479.0 | 2755.5 | 34% | 2.796e-133 | 79% | EU344893.1 | |
472.1 | 2733.5 | 34% | 3.278e-131 | 79% | GU983863.1 |
Alignments
Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome
Sequence ID: KX756669.1 Length: 18313 Number of Matches: 14
Range 1: 8892 to 9509 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
482.2 bits(1046) | 0.0 | 204/206(99%) | 0/206(0%) | Plus/Plus |
Query 1 VFLCLGSS*G*YRRVVVLISVIYFFVFS*ACHP*G*YRWHSFLKWVLKTQFFNLCVLFVLFTP*G*DRWNMYSRGFFFKSRVTLPTLVGAYMWEFELPYLTDKRHISYSAPSVATFSLVSR*DRGQQVTNSLHLRCAGSVGFGLSVPNILLGDVQESSLVCLWGMTGATRFRTVAAM*VVHAALCVRRACIWASALGQRRSGD*QP 618 VFLCLGSS*G*YRRVVVLISVIYFFVFS*ACHP* *YRWHSFLKWVLKT+FFNLCVLFVLFTP*G*DRWNMYSRGFFFKSRVTLPTLVGAYMWEFELPYLTDKRHISYSAPSVATFSLVSR*DRGQQVTNSLHLRCAGSVGFGLSVPNILLGDVQESSLVCLWGMTGATRFRTVAAM*VVHAALCVRRACIWASALGQRRSGD*QP Subject 8892 VFLCLGSS*G*YRRVVVLISVIYFFVFS*ACHP*S*YRWHSFLKWVLKTKFFNLCVLFVLFTP*G*DRWNMYSRGFFFKSRVTLPTLVGAYMWEFELPYLTDKRHISYSAPSVATFSLVSR*DRGQQVTNSLHLRCAGSVGFGLSVPNILLGDVQESSLVCLWGMTGATRFRTVAAM*VVHAALCVRRACIWASALGQRRSGD*QP 9509
Range 2: 8978 to 9547 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
461.6 bits(1001) | 0.0 | 188/190(99%) | 0/190(0%) | Minus/Minus |
Query 87 YLQDLALSALRRAGC*SPDRRCPRALAQMHARLTHNAACTTYIAATVLNLVAPVIPQRHTKLDSCTSPKRIFGTLRPNPTLPAHLKCRLLVTCWPLSYLDTRLKVATLGAL*LMCLLSVRYGSSNSHMYAPTRVGRVTRDLKKNPLLYMFHRSYPHGVNKTKSTHKLKNWVFNTHFKKECHRY*PHGWHA 656 YLQDLALSALRRAGC*SPDRRCPRALAQMHARLTHNAACTTYIAATVLNLVAPVIPQRHTKLDSCTSPKRIFGTLRPNPTLPAHLKCRLLVTCWPLSYLDTRLKVATLGAL*LMCLLSVRYGSSNSHMYAPTRVGRVTRDLKKNPLLYMFHRSYPHGVNKTKSTHKLKN VFNTHFKKECHRY* HGWHA Subject 8978 YLQDLALSALRRAGC*SPDRRCPRALAQMHARLTHNAACTTYIAATVLNLVAPVIPQRHTKLDSCTSPKRIFGTLRPNPTLPAHLKCRLLVTCWPLSYLDTRLKVATLGAL*LMCLLSVRYGSSNSHMYAPTRVGRVTRDLKKNPLLYMFHRSYPHGVNKTKSTHKLKNLVFNTHFKKECHRY*LHGWHA 9547
Range 3: 8893 to 8934 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
37.3 bits(75) | 0.0 | 14/14(100%) | 0/14(0%) | Minus/Minus |
Query 2 PFGINLTKNRGTET 43 PFGINLTKNRGTET Subject 8893 PFGINLTKNRGTET 8934
Range 4: 8892 to 9374 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
373.6 bits(809) | 0.0 | 159/161(99%) | 0/161(0%) | Minus/Minus |
Query 1 TH*TRLLYIA*KDIWHTKTKSNTSSAP*VQAVGHLLAPILPRHKAKSRDTWRAIADVSLVRKIREFKLPHVRSDKSRKGNPRLKEKPSTVHVPPVLSSRCEQNKKYTQIKKLGL*YPLQEGVPPVLTSRMARLREDEKINN*DKYDDPSVLTSRRTEAQKH 483 TH*TRLLYIA*KDIWHTKTKSNTSSAP*VQAVGHLLAPILPRHKAKSRDTWRAIADVSLVRKIREF+LPHVRSDKSRKGNPRLKEKPSTVHVPPVLSSRCEQNKKYTQIKK GL*YPLQEGVPPVLTSRMARLREDEKINN*DKYDDPSVLTSRRTEAQKH Subject 8892 TH*TRLLYIA*KDIWHTKTKSNTSSAP*VQAVGHLLAPILPRHKAKSRDTWRAIADVSLVRKIREFELPHVRSDKSRKGNPRLKEKPSTVHVPPVLSSRCEQNKKYTQIKKFGL*YPLQEGVPPVLTSRMARLREDEKINN*DKYDDPSVLTSRRTEAQKH 9374
Range 5: 9418 to 9546 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
104.6 bits(222) | 0.0 | 43/43(100%) | 0/43(0%) | Minus/Minus |
Query 527 TFRT*HFQRSVEPAASHLTDAALGHSPKCMHVLRTMPHARLT* 655 TFRT*HFQRSVEPAASHLTDAALGHSPKCMHVLRTMPHARLT* Subject 9418 TFRT*HFQRSVEPAASHLTDAALGHSPKCMHVLRTMPHARLT* 9546
Range 6: 8893 to 9378 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
332.8 bits(720) | 0.0 | 161/162(99%) | 0/162(0%) | Plus/Plus |
Query 2 CFCASVLREVNTEGSSYLSQLFIFSSSLRRAIREVNTGGTPS*SGY*RPNFLICVYFLFCSHREDKTGGTCTVEXXXXXXXXXXXXXXERTCGSLNSRILRTRDTSAIARQVSRLLALCRGRIGANR*PTACT*GALEVLDLVLVCQISF*AMYRSLV*CVF 487 CFCASVLREVNTEGSSYLSQLFIFSSSLRRAIREVNTGGTPS*SGY*RPNFLICVYFLFCSHREDKTGGTCTVEGFSLSLGLPFLLLSERTCGS NSRILRTRDTSAIARQVSRLLALCRGRIGANR*PTACT*GALEVLDLVLVCQISF*AMYRSLV*CVF Subject 8893 CFCASVLREVNTEGSSYLSQLFIFSSSLRRAIREVNTGGTPS*SGY*RPNFLICVYFLFCSHREDKTGGTCTVEGFSLSLGLPFLLLSERTCGSSNSRILRTRDTSAIARQVSRLLALCRGRIGANR*PTACT*GALEVLDLVLVCQISF*AMYRSLV*CVF 9378
Range 7: 9410 to 9547 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
110.1 bits(234) | 0.0 | 46/46(100%) | 0/46(0%) | Plus/Plus |
Query 519 CSCYVSRACGIVRKTCMHLGECPRAASVR*LAAGSTER*KC*VLKV 656 CSCYVSRACGIVRKTCMHLGECPRAASVR*LAAGSTER*KC*VLKV Subject 9410 CSCYVSRACGIVRKTCMHLGECPRAASVR*LAAGSTER*KC*VLKV 9547
Range 8: 9083 to 9355 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
223.3 bits(481) | 0.0 | 90/91(99%) | 0/91(0%) | Plus/Plus |
Query 192 RIRPVEHVQ*RVFL*VSGYPSYSCRSVHVGV*TPVSYGQETHQL*RAKCRDF*PCVEVG*GPTGDQQPALKVRWKCWIWS*CAKYPFRRCT 464 RIRPVEHVQ*RVFL*VSGYPSYSCRSVHVGV TPVSYGQETHQL*RAKCRDF*PCVEVG*GPTGDQQPALKVRWKCWIWS*CAKYPFRRCT Subject 9083 RIRPVEHVQ*RVFL*VSGYPSYSCRSVHVGVRTPVSYGQETHQL*RAKCRDF*PCVEVG*GPTGDQQPALKVRWKCWIWS*CAKYPFRRCT 9355
Range 9: 8894 to 9043 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
111.0 bits(236) | 0.0 | 48/50(96%) | 0/50(0%) | Plus/Plus |
Query 3 VSVPRFFVRLIPKGRRTYLSYLFFRLLLGVPSVRLIPVALLLEVGIKDPI 152 VSVPRFFVRLIPKGRRTYLSYLFFRLLLGVPSV+LIPVALLLEVGIKD I Subject 8894 VSVPRFFVRLIPKGRRTYLSYLFFRLLLGVPSVKLIPVALLLEVGIKDQI 9043
Range 10: 9421 to 9549 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
105.5 bits(224) | 0.0 | 43/43(100%) | 0/43(0%) | Plus/Plus |
Query 530 CKSCMRHCA*DVHAFGRVP*GSVGQVTSSRLYGALKVLGPEGT 658 CKSCMRHCA*DVHAFGRVP*GSVGQVTSSRLYGALKVLGPEGT Subject 9421 CKSCMRHCA*DVHAFGRVP*GSVGQVTSSRLYGALKVLGPEGT 9549
Range 11: 8977 to 9378 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
308.5 bits(667) | 0.0 | 131/134(98%) | 0/134(0%) | Minus/Minus |
Query 86 KDTLN*TPVHRLKGYLAH*DQIQHFQRTLSAGCWSPVGPYPTSTQG*KSRHLARYS*CVSCP*DTGVQTPTCTLRQE*EG*PET*RKTLYCTCSTGLILTV*TKQKVHTN*KIGSLIPTSRRSATGINLTDGTP 487 KDTLN*TPVHRLKGYLAH*DQIQHFQRTLSAGCWSPVGPYPTSTQG*KSRHLARYS*CVSCP*DTGV+TPTCTLRQE*EG*PET*RKTLYCTCSTGLILTV*TKQKVHTN*KI SLIPTSRRSATGIN TDGTP Subject 8977 KDTLN*TPVHRLKGYLAH*DQIQHFQRTLSAGCWSPVGPYPTSTQG*KSRHLARYS*CVSCP*DTGVRTPTCTLRQE*EG*PET*RKTLYCTCSTGLILTV*TKQKVHTN*KIWSLIPTSRRSATGINFTDGTP 9378
Range 12: 9423 to 9464 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.0 bits(81) | 0.0 | 14/14(100%) | 0/14(0%) | Minus/Minus |
Query 532 NACTSYAQCRMHDL 573 NACTSYAQCRMHDL Subject 9423 NACTSYAQCRMHDL 9464
Grapevine leafroll associated virus 3 isolate 621, complete genome
Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 14
Range 1: 9077 to 9694 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
479.9 bits(1041) | 0.0 | 202/206(98%) | 0/206(0%) | Plus/Plus |
Query 1 VFLCLGSS*G*YRRVVVLISVIYFFVFS*ACHP*G*YRWHSFLKWVLKTQFFNLCVLFVLFTP*G*DRWNMYSRGFFFKSRVTLPTLVGAYMWEFELPYLTDKRHISYSAPSVATFSLVSR*DRGQQVTNSLHLRCAGSVGFGLSVPNILLGDVQESSLVCLWGMTGATRFRTVAAM*VVHAALCVRRACIWASALGQRRSGD*QP 618 VFLCLGSS*G*YRRVVVLISVIYFFVFS*ACHP* *YRWHSFLKWVLKT+FFNLC+LFVLFTP*G*DRWNMYSRGFFFKSRVTLPTLVGAYMWEFELPYLTDKRHISYSAPSVATFSLVSR*DRGQQVTNSLHLRCAGSVGFGLSVPNILLGDVQESSLVCLWGMTGATRFRTVAAM*VVHAALCVRRACIWA ALGQRRSGD*QP Subject 9077 VFLCLGSS*G*YRRVVVLISVIYFFVFS*ACHP*S*YRWHSFLKWVLKTKFFNLCILFVLFTP*G*DRWNMYSRGFFFKSRVTLPTLVGAYMWEFELPYLTDKRHISYSAPSVATFSLVSR*DRGQQVTNSLHLRCAGSVGFGLSVPNILLGDVQESSLVCLWGMTGATRFRTVAAM*VVHAALCVRRACIWAGALGQRRSGD*QP 9694
Range 2: 9163 to 9732 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
455.6 bits(988) | 0.0 | 186/190(98%) | 0/190(0%) | Minus/Minus |
Query 87 YLQDLALSALRRAGC*SPDRRCPRALAQMHARLTHNAACTTYIAATVLNLVAPVIPQRHTKLDSCTSPKRIFGTLRPNPTLPAHLKCRLLVTCWPLSYLDTRLKVATLGAL*LMCLLSVRYGSSNSHMYAPTRVGRVTRDLKKNPLLYMFHRSYPHGVNKTKSTHKLKNWVFNTHFKKECHRY*PHGWHA 656 YLQDLALSALRRAGC*SPDRRCPRA AQMHARLTHNAACTTYIAATVLNLVAPVIPQRHTKLDSCTSPKRIFGTLRPNPTLPAHLKCRLLVTCWPLSYLDTRLKVATLGAL*LMCLLSVRYGSSNSHMYAPTRVGRVTRDLKKNPLLYMFHRSYPHGVNKTKS HKLKN VFNTHFKKECHRY* HGWHA Subject 9163 YLQDLALSALRRAGC*SPDRRCPRAPAQMHARLTHNAACTTYIAATVLNLVAPVIPQRHTKLDSCTSPKRIFGTLRPNPTLPAHLKCRLLVTCWPLSYLDTRLKVATLGAL*LMCLLSVRYGSSNSHMYAPTRVGRVTRDLKKNPLLYMFHRSYPHGVNKTKSIHKLKNLVFNTHFKKECHRY*LHGWHA 9732
Range 3: 9078 to 9119 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
37.3 bits(75) | 0.0 | 14/14(100%) | 0/14(0%) | Minus/Minus |
Query 2 PFGINLTKNRGTET 43 PFGINLTKNRGTET Subject 9078 PFGINLTKNRGTET 9119
Range 4: 9077 to 9559 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
375.4 bits(813) | 0.0 | 160/161(99%) | 0/161(0%) | Minus/Minus |
Query 1 TH*TRLLYIA*KDIWHTKTKSNTSSAP*VQAVGHLLAPILPRHKAKSRDTWRAIADVSLVRKIREFKLPHVRSDKSRKGNPRLKEKPSTVHVPPVLSSRCEQNKKYTQIKKLGL*YPLQEGVPPVLTSRMARLREDEKINN*DKYDDPSVLTSRRTEAQKH 483 TH*TRLLYIA*KDIWHTKTKSNTSSAP*VQAVGHLLAPILPRHKAKSRDTWRAIADVSLVRKIREFKLPHVRSDKSRKGNPRLKEKPSTVHVPPVLSSRCEQNKKYTQIKK GL*YPLQEGVPPVLTSRMARLREDEKINN*DKYDDPSVLTSRRTEAQKH Subject 9077 TH*TRLLYIA*KDIWHTKTKSNTSSAP*VQAVGHLLAPILPRHKAKSRDTWRAIADVSLVRKIREFKLPHVRSDKSRKGNPRLKEKPSTVHVPPVLSSRCEQNKKYTQIKKFGL*YPLQEGVPPVLTSRMARLREDEKINN*DKYDDPSVLTSRRTEAQKH 9559
Range 5: 9603 to 9731 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
102.3 bits(217) | 0.0 | 42/43(98%) | 0/43(0%) | Minus/Minus |
Query 527 TFRT*HFQRSVEPAASHLTDAALGHSPKCMHVLRTMPHARLT* 655 TFRT*HFQRSVEPAASHLTDAALGH PKCMHVLRTMPHARLT* Subject 9603 TFRT*HFQRSVEPAASHLTDAALGHPPKCMHVLRTMPHARLT* 9731
Range 6: 9078 to 9563 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
335.6 bits(726) | 0.0 | 162/162(100%) | 0/162(0%) | Plus/Plus |
Query 2 CFCASVLREVNTEGSSYLSQLFIFSSSLRRAIREVNTGGTPS*SGY*RPNFLICVYFLFCSHREDKTGGTCTVEXXXXXXXXXXXXXXERTCGSLNSRILRTRDTSAIARQVSRLLALCRGRIGANR*PTACT*GALEVLDLVLVCQISF*AMYRSLV*CVF 487 CFCASVLREVNTEGSSYLSQLFIFSSSLRRAIREVNTGGTPS*SGY*RPNFLICVYFLFCSHREDKTGGTCTVEGFSLSLGLPFLLLSERTCGSLNSRILRTRDTSAIARQVSRLLALCRGRIGANR*PTACT*GALEVLDLVLVCQISF*AMYRSLV*CVF Subject 9078 CFCASVLREVNTEGSSYLSQLFIFSSSLRRAIREVNTGGTPS*SGY*RPNFLICVYFLFCSHREDKTGGTCTVEGFSLSLGLPFLLLSERTCGSLNSRILRTRDTSAIARQVSRLLALCRGRIGANR*PTACT*GALEVLDLVLVCQISF*AMYRSLV*CVF 9563
Range 7: 9595 to 9732 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.9 bits(227) | 0.0 | 45/46(98%) | 0/46(0%) | Plus/Plus |
Query 519 CSCYVSRACGIVRKTCMHLGECPRAASVR*LAAGSTER*KC*VLKV 656 CSCYVSRACGIVRKTCMHLG CPRAASVR*LAAGSTER*KC*VLKV Subject 9595 CSCYVSRACGIVRKTCMHLGGCPRAASVR*LAAGSTER*KC*VLKV 9732
Range 8: 9268 to 9540 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
225.6 bits(486) | 0.0 | 91/91(100%) | 0/91(0%) | Plus/Plus |
Query 192 RIRPVEHVQ*RVFL*VSGYPSYSCRSVHVGV*TPVSYGQETHQL*RAKCRDF*PCVEVG*GPTGDQQPALKVRWKCWIWS*CAKYPFRRCT 464 RIRPVEHVQ*RVFL*VSGYPSYSCRSVHVGV*TPVSYGQETHQL*RAKCRDF*PCVEVG*GPTGDQQPALKVRWKCWIWS*CAKYPFRRCT Subject 9268 RIRPVEHVQ*RVFL*VSGYPSYSCRSVHVGV*TPVSYGQETHQL*RAKCRDF*PCVEVG*GPTGDQQPALKVRWKCWIWS*CAKYPFRRCT 9540
Range 9: 9079 to 9228 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
111.0 bits(236) | 0.0 | 48/50(96%) | 0/50(0%) | Plus/Plus |
Query 3 VSVPRFFVRLIPKGRRTYLSYLFFRLLLGVPSVRLIPVALLLEVGIKDPI 152 VSVPRFFVRLIPKGRRTYLSYLFFRLLLGVPSV+LIPVALLLEVGIKD I Subject 9079 VSVPRFFVRLIPKGRRTYLSYLFFRLLLGVPSVKLIPVALLLEVGIKDQI 9228
Range 10: 9606 to 9734 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
105.5 bits(224) | 0.0 | 43/43(100%) | 0/43(0%) | Plus/Plus |
Query 530 CKSCMRHCA*DVHAFGRVP*GSVGQVTSSRLYGALKVLGPEGT 658 CKSCMRHCA*DVHAFGRVP*GSVGQVTSSRLYGALKVLGPEGT Subject 9606 CKSCMRHCA*DVHAFGRVP*GSVGQVTSSRLYGALKVLGPEGT 9734
Range 11: 9162 to 9563 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
307.6 bits(665) | 0.0 | 131/134(98%) | 0/134(0%) | Minus/Minus |
Query 86 KDTLN*TPVHRLKGYLAH*DQIQHFQRTLSAGCWSPVGPYPTSTQG*KSRHLARYS*CVSCP*DTGVQTPTCTLRQE*EG*PET*RKTLYCTCSTGLILTV*TKQKVHTN*KIGSLIPTSRRSATGINLTDGTP 487 KDTLN*TPVHRLKGYLAH*DQIQHFQRTLSAGCWSPVGPYPTSTQG*KSRHLARYS*CVSCP*DTGVQTPTCTLRQE*EG*PET*RKTLYCTCSTGLILTV*TKQKV+TN*KI SLIPTSRRSATGIN TDGTP Subject 9162 KDTLN*TPVHRLKGYLAH*DQIQHFQRTLSAGCWSPVGPYPTSTQG*KSRHLARYS*CVSCP*DTGVQTPTCTLRQE*EG*PET*RKTLYCTCSTGLILTV*TKQKVYTN*KIWSLIPTSRRSATGINFTDGTP 9563
Range 12: 9608 to 9649 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.0 bits(81) | 0.0 | 14/14(100%) | 0/14(0%) | Minus/Minus |
Query 532 NACTSYAQCRMHDL 573 NACTSYAQCRMHDL Subject 9608 NACTSYAQCRMHDL 9649
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 13
Range 1: 9077 to 9694 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
479.0 bits(1039) | 0.0 | 203/206(99%) | 0/206(0%) | Plus/Plus |
Query 1 VFLCLGSS*G*YRRVVVLISVIYFFVFS*ACHP*G*YRWHSFLKWVLKTQFFNLCVLFVLFTP*G*DRWNMYSRGFFFKSRVTLPTLVGAYMWEFELPYLTDKRHISYSAPSVATFSLVSR*DRGQQVTNSLHLRCAGSVGFGLSVPNILLGDVQESSLVCLWGMTGATRFRTVAAM*VVHAALCVRRACIWASALGQRRSGD*QP 618 VFLCLGSS*G*YRRVVVLISVIYFFVFS*ACHP* *YRWHSFLKWVLKT F NLCVLFVLFTP*G*DRWNMYSRGFFFKSRVTLPTLVGAYMWEFELPYLTDKRHISYSAPSVATFSLVSR*DRGQQVTNSLHLRCAGSVGFGLSVPNILLGDVQESSLVCLWGMTGATRFRTVAAM*VVHAALCVRRACIWASALGQRRSGD*QP Subject 9077 VFLCLGSS*G*YRRVVVLISVIYFFVFS*ACHP*S*YRWHSFLKWVLKTNFLNLCVLFVLFTP*G*DRWNMYSRGFFFKSRVTLPTLVGAYMWEFELPYLTDKRHISYSAPSVATFSLVSR*DRGQQVTNSLHLRCAGSVGFGLSVPNILLGDVQESSLVCLWGMTGATRFRTVAAM*VVHAALCVRRACIWASALGQRRSGD*QP 9694
Range 2: 9163 to 9732 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
457.0 bits(991) | 0.0 | 186/190(98%) | 0/190(0%) | Minus/Minus |
Query 87 YLQDLALSALRRAGC*SPDRRCPRALAQMHARLTHNAACTTYIAATVLNLVAPVIPQRHTKLDSCTSPKRIFGTLRPNPTLPAHLKCRLLVTCWPLSYLDTRLKVATLGAL*LMCLLSVRYGSSNSHMYAPTRVGRVTRDLKKNPLLYMFHRSYPHGVNKTKSTHKLKNWVFNTHFKKECHRY*PHGWHA 656 YLQDLALSALRRAGC*SPDRRCPRALAQMHARLTHNAACTTYIAATVLNLVAPVIPQRHTKLDSCTSPKRIFGTLRPNPTLPAHLKCRLLVTCWPLSYLDTRLKVATLGAL*LMCLLSVRYGSSNSHMYAPTRVGRVTRDLKKNPLLYMFHRSYPHGVNKTKSTHK K VFNTHFKKECHRY* HGWHA Subject 9163 YLQDLALSALRRAGC*SPDRRCPRALAQMHARLTHNAACTTYIAATVLNLVAPVIPQRHTKLDSCTSPKRIFGTLRPNPTLPAHLKCRLLVTCWPLSYLDTRLKVATLGAL*LMCLLSVRYGSSNSHMYAPTRVGRVTRDLKKNPLLYMFHRSYPHGVNKTKSTHKFKKLVFNTHFKKECHRY*LHGWHA 9732
Range 3: 9078 to 9119 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
37.3 bits(75) | 0.0 | 14/14(100%) | 0/14(0%) | Minus/Minus |
Query 2 PFGINLTKNRGTET 43 PFGINLTKNRGTET Subject 9078 PFGINLTKNRGTET 9119
Range 4: 9077 to 9559 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
370.4 bits(802) | 0.0 | 158/161(98%) | 0/161(0%) | Minus/Minus |
Query 1 TH*TRLLYIA*KDIWHTKTKSNTSSAP*VQAVGHLLAPILPRHKAKSRDTWRAIADVSLVRKIREFKLPHVRSDKSRKGNPRLKEKPSTVHVPPVLSSRCEQNKKYTQIKKLGL*YPLQEGVPPVLTSRMARLREDEKINN*DKYDDPSVLTSRRTEAQKH 483 TH*TRLLYI *KDIWHTKTKSNTSSAP*VQAVGHLLAPILPRHKAKSRDTWRAIADVSLVRKIREFKLPHVRSDKSRKGNPRLKEKPSTVHVPPVLSSRCEQNKKYTQI K+GL*YPLQEGVPPVLTSRMARLREDEKINN*DKYDDPSVLTSRRTEAQKH Subject 9077 TH*TRLLYIT*KDIWHTKTKSNTSSAP*VQAVGHLLAPILPRHKAKSRDTWRAIADVSLVRKIREFKLPHVRSDKSRKGNPRLKEKPSTVHVPPVLSSRCEQNKKYTQI*KIGL*YPLQEGVPPVLTSRMARLREDEKINN*DKYDDPSVLTSRRTEAQKH 9559
Range 5: 9603 to 9731 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
104.6 bits(222) | 0.0 | 43/43(100%) | 0/43(0%) | Minus/Minus |
Query 527 TFRT*HFQRSVEPAASHLTDAALGHSPKCMHVLRTMPHARLT* 655 TFRT*HFQRSVEPAASHLTDAALGHSPKCMHVLRTMPHARLT* Subject 9603 TFRT*HFQRSVEPAASHLTDAALGHSPKCMHVLRTMPHARLT* 9731
Range 6: 9078 to 9563 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
325.9 bits(705) | 0.0 | 159/162(98%) | 0/162(0%) | Plus/Plus |
Query 2 CFCASVLREVNTEGSSYLSQLFIFSSSLRRAIREVNTGGTPS*SGY*RPNFLICVYFLFCSHREDKTGGTCTVEXXXXXXXXXXXXXXERTCGSLNSRILRTRDTSAIARQVSRLLALCRGRIGANR*PTACT*GALEVLDLVLVCQISF*AMYRSLV*CVF 487 CFCASVLREVNTEGSSYLSQLFIFSSSLRRAIREVNTGGTPS*SGY*RP F ICVYFLFCSHREDKTGGTCTVEGFSLSLGLPFLLLSERTCGSLNSRILRTRDTSAIARQVSRLLALCRGRIGANR*PTACT*GALEVLDLVLVCQISF* MYRSLV*CVF Subject 9078 CFCASVLREVNTEGSSYLSQLFIFSSSLRRAIREVNTGGTPS*SGY*RPIF*ICVYFLFCSHREDKTGGTCTVEGFSLSLGLPFLLLSERTCGSLNSRILRTRDTSAIARQVSRLLALCRGRIGANR*PTACT*GALEVLDLVLVCQISF*VMYRSLV*CVF 9563
Range 7: 9595 to 9732 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
110.1 bits(234) | 0.0 | 46/46(100%) | 0/46(0%) | Plus/Plus |
Query 519 CSCYVSRACGIVRKTCMHLGECPRAASVR*LAAGSTER*KC*VLKV 656 CSCYVSRACGIVRKTCMHLGECPRAASVR*LAAGSTER*KC*VLKV Subject 9595 CSCYVSRACGIVRKTCMHLGECPRAASVR*LAAGSTER*KC*VLKV 9732
Range 8: 9079 to 9540 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
321.8 bits(696) | 0.0 | 149/154(97%) | 0/154(0%) | Plus/Plus |
Query 3 VSVPRFFVRLIPKGRRTYLSYLFFRLLLGVPSVRLIPVALLLEVGIKDPIXXXXXXXXXXXXXRIRPVEHVQ*RVFL*VSGYPSYSCRSVHVGV*TPVSYGQETHQL*RAKCRDF*PCVEVG*GPTGDQQPALKVRWKCWIWS*CAKYPFRRCT 464 VSVPRFFVRLIPKGRRTYLSYLFFRLLLGVPSV+LIPVALLLEVGIKD F FVCTFCFVHTVRIRPVEHVQ*RVFL*VSGYPSYSCRSVHVGV*TPVSYGQETHQL*RAKCRDF*PCVEVG*GPTGDQQPALKVRWKCWIWS*CAKYPFR CT Subject 9079 VSVPRFFVRLIPKGRRTYLSYLFFRLLLGVPSVKLIPVALLLEVGIKDQFFKFVCTFCFVHTVRIRPVEHVQ*RVFL*VSGYPSYSCRSVHVGV*TPVSYGQETHQL*RAKCRDF*PCVEVG*GPTGDQQPALKVRWKCWIWS*CAKYPFR*CT 9540
Range 9: 9606 to 9734 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
105.5 bits(224) | 0.0 | 43/43(100%) | 0/43(0%) | Plus/Plus |
Query 530 CKSCMRHCA*DVHAFGRVP*GSVGQVTSSRLYGALKVLGPEGT 658 CKSCMRHCA*DVHAFGRVP*GSVGQVTSSRLYGALKVLGPEGT Subject 9606 CKSCMRHCA*DVHAFGRVP*GSVGQVTSSRLYGALKVLGPEGT 9734
Range 10: 9162 to 9563 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
302.6 bits(654) | 0.0 | 129/134(96%) | 0/134(0%) | Minus/Minus |
Query 86 KDTLN*TPVHRLKGYLAH*DQIQHFQRTLSAGCWSPVGPYPTSTQG*KSRHLARYS*CVSCP*DTGVQTPTCTLRQE*EG*PET*RKTLYCTCSTGLILTV*TKQKVHTN*KIGSLIPTSRRSATGINLTDGTP 487 KDTLN*TPVH LKGYLAH*DQIQHFQRTLSAGCWSPVGPYPTSTQG*KSRHLARYS*CVSCP*DTGVQTPTCTLRQE*EG*PET*RKTLYCTCSTGLILTV*TKQKVHTN K SLIPTSRRSATGIN TDGTP Subject 9162 KDTLN*TPVHHLKGYLAH*DQIQHFQRTLSAGCWSPVGPYPTSTQG*KSRHLARYS*CVSCP*DTGVQTPTCTLRQE*EG*PET*RKTLYCTCSTGLILTV*TKQKVHTNLKNWSLIPTSRRSATGINFTDGTP 9563
Range 11: 9608 to 9649 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.0 bits(81) | 0.0 | 14/14(100%) | 0/14(0%) | Minus/Minus |
Query 532 NACTSYAQCRMHDL 573 NACTSYAQCRMHDL Subject 9608 NACTSYAQCRMHDL 9649
Grapevine leafroll associated virus 3 isolate Cl 766, complete genome
Sequence ID: EU344893.1 Length: 17919 Number of Matches: 14
Range 1: 8498 to 9115 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
479.0 bits(1039) | 0.0 | 203/206(99%) | 0/206(0%) | Plus/Plus |
Query 1 VFLCLGSS*G*YRRVVVLISVIYFFVFS*ACHP*G*YRWHSFLKWVLKTQFFNLCVLFVLFTP*G*DRWNMYSRGFFFKSRVTLPTLVGAYMWEFELPYLTDKRHISYSAPSVATFSLVSR*DRGQQVTNSLHLRCAGSVGFGLSVPNILLGDVQESSLVCLWGMTGATRFRTVAAM*VVHAALCVRRACIWASALGQRRSGD*QP 618 VFLCLGSS*G*YRRVVVLISVIYFFVFS*ACHP* *YRWHSFLKWVLKT+FFNLCVLFVLFTP*G*DRWNMYSRGFFFKSRVTLPTLVGAYMWEFELPYLTDKRHISYSAPSVATFSLVSR*DRGQQVTNSLHLRCAGSVGFGLSVPNILLGDVQESSLVCLWGMTGATRFRTVAAM*VVHAALCV RACIWASALGQRRSGD*QP Subject 8498 VFLCLGSS*G*YRRVVVLISVIYFFVFS*ACHP*S*YRWHSFLKWVLKTKFFNLCVLFVLFTP*G*DRWNMYSRGFFFKSRVTLPTLVGAYMWEFELPYLTDKRHISYSAPSVATFSLVSR*DRGQQVTNSLHLRCAGSVGFGLSVPNILLGDVQESSLVCLWGMTGATRFRTVAAM*VVHAALCVGRACIWASALGQRRSGD*QP 9115
Range 2: 8584 to 9153 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
457.0 bits(991) | 0.0 | 186/190(98%) | 0/190(0%) | Minus/Minus |
Query 87 YLQDLALSALRRAGC*SPDRRCPRALAQMHARLTHNAACTTYIAATVLNLVAPVIPQRHTKLDSCTSPKRIFGTLRPNPTLPAHLKCRLLVTCWPLSYLDTRLKVATLGAL*LMCLLSVRYGSSNSHMYAPTRVGRVTRDLKKNPLLYMFHRSYPHGVNKTKSTHKLKNWVFNTHFKKECHRY*PHGWHA 656 YLQDLALSALRRAGC*SPDRRCPRALAQMHAR THNAACTTYIAATVLNLVAPVIPQRHTKLDSCTSP+RIFGTLRPNPTLPAHLKCRLLVTCWPLSYLDTRLKVATLGAL*LMCLLSVRYGSSNSHMYAPTRVGRVTRDLKKNPLLYMFHRSYPHGVNKTKSTHKLKN VFNTHFKKECHRY* HGWHA Subject 8584 YLQDLALSALRRAGC*SPDRRCPRALAQMHARPTHNAACTTYIAATVLNLVAPVIPQRHTKLDSCTSPRRIFGTLRPNPTLPAHLKCRLLVTCWPLSYLDTRLKVATLGAL*LMCLLSVRYGSSNSHMYAPTRVGRVTRDLKKNPLLYMFHRSYPHGVNKTKSTHKLKNLVFNTHFKKECHRY*LHGWHA 9153
Range 3: 8499 to 8540 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
37.3 bits(75) | 0.0 | 14/14(100%) | 0/14(0%) | Minus/Minus |
Query 2 PFGINLTKNRGTET 43 PFGINLTKNRGTET Subject 8499 PFGINLTKNRGTET 8540
Range 4: 8498 to 8980 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
375.4 bits(813) | 0.0 | 160/161(99%) | 0/161(0%) | Minus/Minus |
Query 1 TH*TRLLYIA*KDIWHTKTKSNTSSAP*VQAVGHLLAPILPRHKAKSRDTWRAIADVSLVRKIREFKLPHVRSDKSRKGNPRLKEKPSTVHVPPVLSSRCEQNKKYTQIKKLGL*YPLQEGVPPVLTSRMARLREDEKINN*DKYDDPSVLTSRRTEAQKH 483 TH*TRLLYIA*KDIWHTKTKSNTSSAP*VQAVGHLLAPILPRHKAKSRDTWRAIADVSLVRKIREFKLPHVRSDKSRKGNPRLKEKPSTVHVPPVLSSRCEQNKKYTQIKK GL*YPLQEGVPPVLTSRMARLREDEKINN*DKYDDPSVLTSRRTEAQKH Subject 8498 TH*TRLLYIA*KDIWHTKTKSNTSSAP*VQAVGHLLAPILPRHKAKSRDTWRAIADVSLVRKIREFKLPHVRSDKSRKGNPRLKEKPSTVHVPPVLSSRCEQNKKYTQIKKFGL*YPLQEGVPPVLTSRMARLREDEKINN*DKYDDPSVLTSRRTEAQKH 8980
Range 5: 9024 to 9152 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
104.6 bits(222) | 0.0 | 43/43(100%) | 0/43(0%) | Minus/Minus |
Query 527 TFRT*HFQRSVEPAASHLTDAALGHSPKCMHVLRTMPHARLT* 655 TFRT*HFQRSVEPAASHLTDAALGHSPKCMHVLRTMPHARLT* Subject 9024 TFRT*HFQRSVEPAASHLTDAALGHSPKCMHVLRTMPHARLT* 9152
Range 6: 8499 to 8984 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
335.6 bits(726) | 0.0 | 162/162(100%) | 0/162(0%) | Plus/Plus |
Query 2 CFCASVLREVNTEGSSYLSQLFIFSSSLRRAIREVNTGGTPS*SGY*RPNFLICVYFLFCSHREDKTGGTCTVEXXXXXXXXXXXXXXERTCGSLNSRILRTRDTSAIARQVSRLLALCRGRIGANR*PTACT*GALEVLDLVLVCQISF*AMYRSLV*CVF 487 CFCASVLREVNTEGSSYLSQLFIFSSSLRRAIREVNTGGTPS*SGY*RPNFLICVYFLFCSHREDKTGGTCTVEGFSLSLGLPFLLLSERTCGSLNSRILRTRDTSAIARQVSRLLALCRGRIGANR*PTACT*GALEVLDLVLVCQISF*AMYRSLV*CVF Subject 8499 CFCASVLREVNTEGSSYLSQLFIFSSSLRRAIREVNTGGTPS*SGY*RPNFLICVYFLFCSHREDKTGGTCTVEGFSLSLGLPFLLLSERTCGSLNSRILRTRDTSAIARQVSRLLALCRGRIGANR*PTACT*GALEVLDLVLVCQISF*AMYRSLV*CVF 8984
Range 7: 9016 to 9153 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
108.7 bits(231) | 0.0 | 45/46(98%) | 0/46(0%) | Plus/Plus |
Query 519 CSCYVSRACGIVRKTCMHLGECPRAASVR*LAAGSTER*KC*VLKV 656 CSCYVSRACGIVR+TCMHLGECPRAASVR*LAAGSTER*KC*VLKV Subject 9016 CSCYVSRACGIVRRTCMHLGECPRAASVR*LAAGSTER*KC*VLKV 9153
Range 8: 8689 to 8961 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
221.9 bits(478) | 0.0 | 90/91(99%) | 0/91(0%) | Plus/Plus |
Query 192 RIRPVEHVQ*RVFL*VSGYPSYSCRSVHVGV*TPVSYGQETHQL*RAKCRDF*PCVEVG*GPTGDQQPALKVRWKCWIWS*CAKYPFRRCT 464 RIRPVEHVQ*RVFL*VSGYPSYSCRSVHVGV*TPVSYGQETHQL*RAKCRDF*PCVEVG*GPTGDQQPALKVRWKCWIWS*CAKYP RRCT Subject 8689 RIRPVEHVQ*RVFL*VSGYPSYSCRSVHVGV*TPVSYGQETHQL*RAKCRDF*PCVEVG*GPTGDQQPALKVRWKCWIWS*CAKYPSRRCT 8961
Range 9: 8500 to 8649 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
111.0 bits(236) | 0.0 | 48/50(96%) | 0/50(0%) | Plus/Plus |
Query 3 VSVPRFFVRLIPKGRRTYLSYLFFRLLLGVPSVRLIPVALLLEVGIKDPI 152 VSVPRFFVRLIPKGRRTYLSYLFFRLLLGVPSV+LIPVALLLEVGIKD I Subject 8500 VSVPRFFVRLIPKGRRTYLSYLFFRLLLGVPSVKLIPVALLLEVGIKDQI 8649
Range 10: 9027 to 9155 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
105.5 bits(224) | 0.0 | 43/43(100%) | 0/43(0%) | Plus/Plus |
Query 530 CKSCMRHCA*DVHAFGRVP*GSVGQVTSSRLYGALKVLGPEGT 658 CKSCMRHCA*DVHAFGRVP*GSVGQVTSSRLYGALKVLGPEGT Subject 9027 CKSCMRHCA*DVHAFGRVP*GSVGQVTSSRLYGALKVLGPEGT 9155
Range 11: 8583 to 8984 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
308.5 bits(667) | 0.0 | 131/134(98%) | 0/134(0%) | Minus/Minus |
Query 86 KDTLN*TPVHRLKGYLAH*DQIQHFQRTLSAGCWSPVGPYPTSTQG*KSRHLARYS*CVSCP*DTGVQTPTCTLRQE*EG*PET*RKTLYCTCSTGLILTV*TKQKVHTN*KIGSLIPTSRRSATGINLTDGTP 487 KDTLN*TPVHRL+GYLAH*DQIQHFQRTLSAGCWSPVGPYPTSTQG*KSRHLARYS*CVSCP*DTGVQTPTCTLRQE*EG*PET*RKTLYCTCSTGLILTV*TKQKVHTN*KI SLIPTSRRSATGIN TDGTP Subject 8583 KDTLN*TPVHRLEGYLAH*DQIQHFQRTLSAGCWSPVGPYPTSTQG*KSRHLARYS*CVSCP*DTGVQTPTCTLRQE*EG*PET*RKTLYCTCSTGLILTV*TKQKVHTN*KIWSLIPTSRRSATGINFTDGTP 8984
Range 12: 9029 to 9070 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.0 bits(81) | 0.0 | 14/14(100%) | 0/14(0%) | Minus/Minus |
Query 532 NACTSYAQCRMHDL 573 NACTSYAQCRMHDL Subject 9029 NACTSYAQCRMHDL 9070
Grapevine leafroll associated virus 3 isolate WA MR, complete genome
Sequence ID: GU983863.1 Length: 18498 Number of Matches: 14
Range 1: 9077 to 9694 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
472.1 bits(1024) | 0.0 | 201/206(98%) | 0/206(0%) | Plus/Plus |
Query 1 VFLCLGSS*G*YRRVVVLISVIYFFVFS*ACHP*G*YRWHSFLKWVLKTQFFNLCVLFVLFTP*G*DRWNMYSRGFFFKSRVTLPTLVGAYMWEFELPYLTDKRHISYSAPSVATFSLVSR*DRGQQVTNSLHLRCAGSVGFGLSVPNILLGDVQESSLVCLWGMTGATRFRTVAAM*VVHAALCVRRACIWASALGQRRSGD*QP 618 VFLCLGSS*G*YRRVVVLISVIYFFVFS*ACHP* *YRWHSFLKWVLKT+ F LCVLFVLFTP*G*DRWNMYSRGFFFKS VTLPTLVGAYMWEFELPYLTDKRHISYSAPSVATFSLVSR*DRGQQVTNSLHLRCAGSVGFGLSVPNILLGDVQESSLVCLWGMTGATRFRTVAAM*VVHAALCVRRACIWASALGQRRSGD*QP Subject 9077 VFLCLGSS*G*YRRVVVLISVIYFFVFS*ACHP*S*YRWHSFLKWVLKTKIFYLCVLFVLFTP*G*DRWNMYSRGFFFKSWVTLPTLVGAYMWEFELPYLTDKRHISYSAPSVATFSLVSR*DRGQQVTNSLHLRCAGSVGFGLSVPNILLGDVQESSLVCLWGMTGATRFRTVAAM*VVHAALCVRRACIWASALGQRRSGD*QP 9694
Range 2: 9163 to 9732 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
451.9 bits(980) | 0.0 | 185/190(97%) | 0/190(0%) | Minus/Minus |
Query 87 YLQDLALSALRRAGC*SPDRRCPRALAQMHARLTHNAACTTYIAATVLNLVAPVIPQRHTKLDSCTSPKRIFGTLRPNPTLPAHLKCRLLVTCWPLSYLDTRLKVATLGAL*LMCLLSVRYGSSNSHMYAPTRVGRVTRDLKKNPLLYMFHRSYPHGVNKTKSTHKLKNWVFNTHFKKECHRY*PHGWHA 656 YLQDLALSALRRAGC*SPDRRCPRALAQMHARLTHNAACTTYIAATVLNLVAPVIPQRHTKLDSCTSPKRIFGTLRPNPTLPAHLKCRLLVTCWPLSYLDTRLKVATLGAL*LMCLLSVRYGSSNSHMYAPTRVGRVT+DLKKNPLLYMFHRSYPHGVNKTKSTHK K VFNTHFKKECHRY* HGWHA Subject 9163 YLQDLALSALRRAGC*SPDRRCPRALAQMHARLTHNAACTTYIAATVLNLVAPVIPQRHTKLDSCTSPKRIFGTLRPNPTLPAHLKCRLLVTCWPLSYLDTRLKVATLGAL*LMCLLSVRYGSSNSHMYAPTRVGRVTQDLKKNPLLYMFHRSYPHGVNKTKSTHK*KILVFNTHFKKECHRY*LHGWHA 9732
Range 3: 9078 to 9119 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
37.3 bits(75) | 0.0 | 14/14(100%) | 0/14(0%) | Minus/Minus |
Query 2 PFGINLTKNRGTET 43 PFGINLTKNRGTET Subject 9078 PFGINLTKNRGTET 9119
Range 4: 9077 to 9559 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
373.1 bits(808) | 0.0 | 159/161(99%) | 0/161(0%) | Minus/Minus |
Query 1 TH*TRLLYIA*KDIWHTKTKSNTSSAP*VQAVGHLLAPILPRHKAKSRDTWRAIADVSLVRKIREFKLPHVRSDKSRKGNPRLKEKPSTVHVPPVLSSRCEQNKKYTQIKKLGL*YPLQEGVPPVLTSRMARLREDEKINN*DKYDDPSVLTSRRTEAQKH 483 TH*TRLLYIA*KDIWHTKTKSNTSSAP*VQAVGHLLAPILPRHKAKSRDTWRAIADVSLVRKIREFKLPHVRSDKSRKGNPRLKEKPSTVHVPPVLSSRCEQNKKYTQIK GL*YPLQEGVPPVLTSRMARLREDEKINN*DKYDDPSVLTSRRTEAQKH Subject 9077 TH*TRLLYIA*KDIWHTKTKSNTSSAP*VQAVGHLLAPILPRHKAKSRDTWRAIADVSLVRKIREFKLPHVRSDKSRKGNPRLKEKPSTVHVPPVLSSRCEQNKKYTQIKNFGL*YPLQEGVPPVLTSRMARLREDEKINN*DKYDDPSVLTSRRTEAQKH 9559
Range 5: 9603 to 9731 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
104.6 bits(222) | 0.0 | 43/43(100%) | 0/43(0%) | Minus/Minus |
Query 527 TFRT*HFQRSVEPAASHLTDAALGHSPKCMHVLRTMPHARLT* 655 TFRT*HFQRSVEPAASHLTDAALGHSPKCMHVLRTMPHARLT* Subject 9603 TFRT*HFQRSVEPAASHLTDAALGHSPKCMHVLRTMPHARLT* 9731
Range 6: 9078 to 9563 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
331.0 bits(716) | 0.0 | 160/162(99%) | 0/162(0%) | Plus/Plus |
Query 2 CFCASVLREVNTEGSSYLSQLFIFSSSLRRAIREVNTGGTPS*SGY*RPNFLICVYFLFCSHREDKTGGTCTVEXXXXXXXXXXXXXXERTCGSLNSRILRTRDTSAIARQVSRLLALCRGRIGANR*PTACT*GALEVLDLVLVCQISF*AMYRSLV*CVF 487 CFCASVLREVNTEGSSYLSQLFIFSSSLRRAIREVNTGGTPS*SGY*RP F ICVYFLFCSHREDKTGGTCTVEGFSLSLGLPFLLLSERTCGSLNSRILRTRDTSAIARQVSRLLALCRGRIGANR*PTACT*GALEVLDLVLVCQISF*AMYRSLV*CVF Subject 9078 CFCASVLREVNTEGSSYLSQLFIFSSSLRRAIREVNTGGTPS*SGY*RPKFFICVYFLFCSHREDKTGGTCTVEGFSLSLGLPFLLLSERTCGSLNSRILRTRDTSAIARQVSRLLALCRGRIGANR*PTACT*GALEVLDLVLVCQISF*AMYRSLV*CVF 9563
Range 7: 9595 to 9732 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
110.1 bits(234) | 0.0 | 46/46(100%) | 0/46(0%) | Plus/Plus |
Query 519 CSCYVSRACGIVRKTCMHLGECPRAASVR*LAAGSTER*KC*VLKV 656 CSCYVSRACGIVRKTCMHLGECPRAASVR*LAAGSTER*KC*VLKV Subject 9595 CSCYVSRACGIVRKTCMHLGECPRAASVR*LAAGSTER*KC*VLKV 9732
Range 8: 9268 to 9540 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
222.8 bits(480) | 0.0 | 90/91(99%) | 0/91(0%) | Plus/Plus |
Query 192 RIRPVEHVQ*RVFL*VSGYPSYSCRSVHVGV*TPVSYGQETHQL*RAKCRDF*PCVEVG*GPTGDQQPALKVRWKCWIWS*CAKYPFRRCT 464 RIRPVEHVQ*RVFL*V GYPSYSCRSVHVGV*TPVSYGQETHQL*RAKCRDF*PCVEVG*GPTGDQQPALKVRWKCWIWS*CAKYPFRRCT Subject 9268 RIRPVEHVQ*RVFL*VLGYPSYSCRSVHVGV*TPVSYGQETHQL*RAKCRDF*PCVEVG*GPTGDQQPALKVRWKCWIWS*CAKYPFRRCT 9540
Range 9: 9079 to 9222 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
109.7 bits(233) | 0.0 | 47/48(98%) | 0/48(0%) | Plus/Plus |
Query 3 VSVPRFFVRLIPKGRRTYLSYLFFRLLLGVPSVRLIPVALLLEVGIKD 146 VSVPRFFVRLIPKGRRTYLSYLFFRLLLGVPSV+LIPVALLLEVGIKD Subject 9079 VSVPRFFVRLIPKGRRTYLSYLFFRLLLGVPSVKLIPVALLLEVGIKD 9222
Range 10: 9606 to 9734 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
105.5 bits(224) | 0.0 | 43/43(100%) | 0/43(0%) | Plus/Plus |
Query 530 CKSCMRHCA*DVHAFGRVP*GSVGQVTSSRLYGALKVLGPEGT 658 CKSCMRHCA*DVHAFGRVP*GSVGQVTSSRLYGALKVLGPEGT Subject 9606 CKSCMRHCA*DVHAFGRVP*GSVGQVTSSRLYGALKVLGPEGT 9734
Range 11: 9162 to 9563 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
304.4 bits(658) | 0.0 | 129/134(96%) | 0/134(0%) | Minus/Minus |
Query 86 KDTLN*TPVHRLKGYLAH*DQIQHFQRTLSAGCWSPVGPYPTSTQG*KSRHLARYS*CVSCP*DTGVQTPTCTLRQE*EG*PET*RKTLYCTCSTGLILTV*TKQKVHTN*KIGSLIPTSRRSATGINLTDGTP 487 KDTLN*TPVHRLKGYLAH*DQIQHFQRTLSAGCWSPVGPYPTSTQG*KSRHLARYS*CVSCP*DTGVQTPTCTLRQE*EG*P+T*RKTLYCTCSTGLILTV*TKQKVHTN K SLIPTSRRSATGIN TDGTP Subject 9162 KDTLN*TPVHRLKGYLAH*DQIQHFQRTLSAGCWSPVGPYPTSTQG*KSRHLARYS*CVSCP*DTGVQTPTCTLRQE*EG*PKT*RKTLYCTCSTGLILTV*TKQKVHTNKKFWSLIPTSRRSATGINFTDGTP 9563
Range 12: 9608 to 9649 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.0 bits(81) | 0.0 | 14/14(100%) | 0/14(0%) | Minus/Minus |
Query 532 NACTSYAQCRMHDL 573 NACTSYAQCRMHDL Subject 9608 NACTSYAQCRMHDL 9649
Nucleotide Sequence (341 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
287.4 | 1478.4 | 25% | 4.471e-76 | 100% | GQ352632.1 | |
287.4 | 1478.4 | 25% | 4.471e-76 | 100% | EU259806.1 | |
287.4 | 1478.4 | 25% | 4.471e-76 | 100% | KX756668.1 | |
285.6 | 1461.5 | 25% | 1.593e-75 | 96% | KX701860.1 | |
284.7 | 1468.4 | 25% | 3.006e-75 | 98% | KJ174518.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 623, complete genome
Sequence ID: GQ352632.1 Length: 18498 Number of Matches: 9
Range 1: 6975 to 7313 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
287.4 bits(621) | 0.0 | 113/113(100%) | 0/113(0%) | Minus/Minus |
Query 1 CMS*QTNKYMRLFSEQ*VICLLCPEQHHITECFSLCFMYCHHWCFFPFSLQRPLHIRLLQLGHAQIHVSVYFSHVISSSNWPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQ 339 CMS*QTNKYMRLFSEQ*VICLLCPEQHHITECFSLCFMYCHHWCFFPFSLQRPLHIRLLQLGHAQIHVSVYFSHVISSSNWPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQ Subject 6975 CMS*QTNKYMRLFSEQ*VICLLCPEQHHITECFSLCFMYCHHWCFFPFSLQRPLHIRLLQLGHAQIHVSVYFSHVISSSNWPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQ 7313
Range 2: 6975 to 7313 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
265.7 bits(579) | 0.0 | 113/113(100%) | 0/113(0%) | Plus/Plus |
Query 1 LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFGDVVLFRTKKADDSLFTKQPHILVGLSRHT 339 LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFGDVVLFRTKKADDSLFTKQPHILVGLSRHT Subject 6975 LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFGDVVLFRTKKADDSLFTKQPHILVGLSRHT 7313
Range 3: 7168 to 7314 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.0 bits(273) | 0.0 | 49/49(100%) | 0/49(0%) | Plus/Plus |
Query 194 EKGKKHQ**QYMKHREKHSVMWCCSGQRRQMTHCSLNNRIYLLVCQDIH 340 EKGKKHQ**QYMKHREKHSVMWCCSGQRRQMTHCSLNNRIYLLVCQDIH Subject 7168 EKGKKHQ**QYMKHREKHSVMWCCSGQRRQMTHCSLNNRIYLLVCQDIH 7314
Range 4: 6976 to 7137 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
127.1 bits(271) | 0.0 | 54/54(100%) | 0/54(0%) | Plus/Plus |
Query 2 CPQ*P*GERKSVTLKRSLVVRISR**DHCPKGQLELLMTWLK*TLTCICA*PSW 163 CPQ*P*GERKSVTLKRSLVVRISR**DHCPKGQLELLMTWLK*TLTCICA*PSW Subject 6976 CPQ*P*GERKSVTLKRSLVVRISR**DHCPKGQLELLMTWLK*TLTCICA*PSW 7137
Range 5: 6977 to 7315 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
225.6 bits(486) | 0.0 | 113/113(100%) | 0/113(0%) | Plus/Plus |
Query 3 VLNDRKGNGKVLP*KGR*W*G*AGSEITVQKANWNY**RG*NKR*RVFVHDPXXXXXXXXXXXXKRERNTSDDST*STGKNIR*CGVVQDKEGR*LIVH*TTAYTCWSVKTYT 341 VLNDRKGNGKVLP*KGR*W*G*AGSEITVQKANWNY**RG*NKR*RVFVHDPVGEVGYEEVVEGKRERNTSDDST*STGKNIR*CGVVQDKEGR*LIVH*TTAYTCWSVKTYT Subject 6977 VLNDRKGNGKVLP*KGR*W*G*AGSEITVQKANWNY**RG*NKR*RVFVHDPVGEVGYEEVVEGKRERNTSDDST*STGKNIR*CGVVQDKEGR*LIVH*TTAYTCWSVKTYT 7315
Range 6: 7073 to 7315 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
202.2 bits(435) | 0.0 | 81/81(100%) | 0/81(0%) | Minus/Minus |
Query 99 RVCLDRPTSICGCLVNNESSAFFVLNNTTSPNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI 341 RVCLDRPTSICGCLVNNESSAFFVLNNTTSPNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI Subject 7073 RVCLDRPTSICGCLVNNESSAFFVLNNTTSPNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI 7315
Range 7: 6977 to 7021 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
36.8 bits(74) | 0.0 | 15/15(100%) | 0/15(0%) | Minus/Minus |
Query 3 FSG*HFSVPLTVIED 47 FSG*HFSVPLTVIED Subject 6977 FSG*HFSVPLTVIED 7021
Range 8: 6976 to 7131 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.1 bits(282) | 0.0 | 52/52(100%) | 0/52(0%) | Minus/Minus |
Query 2 GSCTNTRQRLFQPRHQ*FQLAFWTVISLPAYPYH*RPFQGNTFPFPLRSLRT 157 GSCTNTRQRLFQPRHQ*FQLAFWTVISLPAYPYH*RPFQGNTFPFPLRSLRT Subject 6976 GSCTNTRQRLFQPRHQ*FQLAFWTVISLPAYPYH*RPFQGNTFPFPLRSLRT 7131
Grapevine leafroll associated virus 3 isolate GP18, complete genome
Sequence ID: EU259806.1 Length: 18498 Number of Matches: 9
Range 1: 6975 to 7313 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
287.4 bits(621) | 0.0 | 113/113(100%) | 0/113(0%) | Minus/Minus |
Query 1 CMS*QTNKYMRLFSEQ*VICLLCPEQHHITECFSLCFMYCHHWCFFPFSLQRPLHIRLLQLGHAQIHVSVYFSHVISSSNWPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQ 339 CMS*QTNKYMRLFSEQ*VICLLCPEQHHITECFSLCFMYCHHWCFFPFSLQRPLHIRLLQLGHAQIHVSVYFSHVISSSNWPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQ Subject 6975 CMS*QTNKYMRLFSEQ*VICLLCPEQHHITECFSLCFMYCHHWCFFPFSLQRPLHIRLLQLGHAQIHVSVYFSHVISSSNWPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQ 7313
Range 2: 6975 to 7313 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
265.7 bits(579) | 0.0 | 113/113(100%) | 0/113(0%) | Plus/Plus |
Query 1 LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFGDVVLFRTKKADDSLFTKQPHILVGLSRHT 339 LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFGDVVLFRTKKADDSLFTKQPHILVGLSRHT Subject 6975 LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFGDVVLFRTKKADDSLFTKQPHILVGLSRHT 7313
Range 3: 7168 to 7314 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.0 bits(273) | 0.0 | 49/49(100%) | 0/49(0%) | Plus/Plus |
Query 194 EKGKKHQ**QYMKHREKHSVMWCCSGQRRQMTHCSLNNRIYLLVCQDIH 340 EKGKKHQ**QYMKHREKHSVMWCCSGQRRQMTHCSLNNRIYLLVCQDIH Subject 7168 EKGKKHQ**QYMKHREKHSVMWCCSGQRRQMTHCSLNNRIYLLVCQDIH 7314
Range 4: 6976 to 7137 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
127.1 bits(271) | 0.0 | 54/54(100%) | 0/54(0%) | Plus/Plus |
Query 2 CPQ*P*GERKSVTLKRSLVVRISR**DHCPKGQLELLMTWLK*TLTCICA*PSW 163 CPQ*P*GERKSVTLKRSLVVRISR**DHCPKGQLELLMTWLK*TLTCICA*PSW Subject 6976 CPQ*P*GERKSVTLKRSLVVRISR**DHCPKGQLELLMTWLK*TLTCICA*PSW 7137
Range 5: 6977 to 7315 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
225.6 bits(486) | 0.0 | 113/113(100%) | 0/113(0%) | Plus/Plus |
Query 3 VLNDRKGNGKVLP*KGR*W*G*AGSEITVQKANWNY**RG*NKR*RVFVHDPXXXXXXXXXXXXKRERNTSDDST*STGKNIR*CGVVQDKEGR*LIVH*TTAYTCWSVKTYT 341 VLNDRKGNGKVLP*KGR*W*G*AGSEITVQKANWNY**RG*NKR*RVFVHDPVGEVGYEEVVEGKRERNTSDDST*STGKNIR*CGVVQDKEGR*LIVH*TTAYTCWSVKTYT Subject 6977 VLNDRKGNGKVLP*KGR*W*G*AGSEITVQKANWNY**RG*NKR*RVFVHDPVGEVGYEEVVEGKRERNTSDDST*STGKNIR*CGVVQDKEGR*LIVH*TTAYTCWSVKTYT 7315
Range 6: 7073 to 7315 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
202.2 bits(435) | 0.0 | 81/81(100%) | 0/81(0%) | Minus/Minus |
Query 99 RVCLDRPTSICGCLVNNESSAFFVLNNTTSPNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI 341 RVCLDRPTSICGCLVNNESSAFFVLNNTTSPNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI Subject 7073 RVCLDRPTSICGCLVNNESSAFFVLNNTTSPNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI 7315
Range 7: 6977 to 7021 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
36.8 bits(74) | 0.0 | 15/15(100%) | 0/15(0%) | Minus/Minus |
Query 3 FSG*HFSVPLTVIED 47 FSG*HFSVPLTVIED Subject 6977 FSG*HFSVPLTVIED 7021
Range 8: 6976 to 7131 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.1 bits(282) | 0.0 | 52/52(100%) | 0/52(0%) | Minus/Minus |
Query 2 GSCTNTRQRLFQPRHQ*FQLAFWTVISLPAYPYH*RPFQGNTFPFPLRSLRT 157 GSCTNTRQRLFQPRHQ*FQLAFWTVISLPAYPYH*RPFQGNTFPFPLRSLRT Subject 6976 GSCTNTRQRLFQPRHQ*FQLAFWTVISLPAYPYH*RPFQGNTFPFPLRSLRT 7131
Grapevine leafroll associated virus 3 isolate TC BR, complete genome
Sequence ID: KX756668.1 Length: 18498 Number of Matches: 9
Range 1: 6975 to 7313 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
287.4 bits(621) | 0.0 | 113/113(100%) | 0/113(0%) | Minus/Minus |
Query 1 CMS*QTNKYMRLFSEQ*VICLLCPEQHHITECFSLCFMYCHHWCFFPFSLQRPLHIRLLQLGHAQIHVSVYFSHVISSSNWPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQ 339 CMS*QTNKYMRLFSEQ*VICLLCPEQHHITECFSLCFMYCHHWCFFPFSLQRPLHIRLLQLGHAQIHVSVYFSHVISSSNWPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQ Subject 6975 CMS*QTNKYMRLFSEQ*VICLLCPEQHHITECFSLCFMYCHHWCFFPFSLQRPLHIRLLQLGHAQIHVSVYFSHVISSSNWPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQ 7313
Range 2: 6975 to 7313 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
265.7 bits(579) | 0.0 | 113/113(100%) | 0/113(0%) | Plus/Plus |
Query 1 LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFGDVVLFRTKKADDSLFTKQPHILVGLSRHT 339 LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFGDVVLFRTKKADDSLFTKQPHILVGLSRHT Subject 6975 LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFGDVVLFRTKKADDSLFTKQPHILVGLSRHT 7313
Range 3: 7168 to 7314 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.0 bits(273) | 0.0 | 49/49(100%) | 0/49(0%) | Plus/Plus |
Query 194 EKGKKHQ**QYMKHREKHSVMWCCSGQRRQMTHCSLNNRIYLLVCQDIH 340 EKGKKHQ**QYMKHREKHSVMWCCSGQRRQMTHCSLNNRIYLLVCQDIH Subject 7168 EKGKKHQ**QYMKHREKHSVMWCCSGQRRQMTHCSLNNRIYLLVCQDIH 7314
Range 4: 6976 to 7137 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
127.1 bits(271) | 0.0 | 54/54(100%) | 0/54(0%) | Plus/Plus |
Query 2 CPQ*P*GERKSVTLKRSLVVRISR**DHCPKGQLELLMTWLK*TLTCICA*PSW 163 CPQ*P*GERKSVTLKRSLVVRISR**DHCPKGQLELLMTWLK*TLTCICA*PSW Subject 6976 CPQ*P*GERKSVTLKRSLVVRISR**DHCPKGQLELLMTWLK*TLTCICA*PSW 7137
Range 5: 6977 to 7315 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
225.6 bits(486) | 0.0 | 113/113(100%) | 0/113(0%) | Plus/Plus |
Query 3 VLNDRKGNGKVLP*KGR*W*G*AGSEITVQKANWNY**RG*NKR*RVFVHDPXXXXXXXXXXXXKRERNTSDDST*STGKNIR*CGVVQDKEGR*LIVH*TTAYTCWSVKTYT 341 VLNDRKGNGKVLP*KGR*W*G*AGSEITVQKANWNY**RG*NKR*RVFVHDPVGEVGYEEVVEGKRERNTSDDST*STGKNIR*CGVVQDKEGR*LIVH*TTAYTCWSVKTYT Subject 6977 VLNDRKGNGKVLP*KGR*W*G*AGSEITVQKANWNY**RG*NKR*RVFVHDPVGEVGYEEVVEGKRERNTSDDST*STGKNIR*CGVVQDKEGR*LIVH*TTAYTCWSVKTYT 7315
Range 6: 7073 to 7315 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
202.2 bits(435) | 0.0 | 81/81(100%) | 0/81(0%) | Minus/Minus |
Query 99 RVCLDRPTSICGCLVNNESSAFFVLNNTTSPNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI 341 RVCLDRPTSICGCLVNNESSAFFVLNNTTSPNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI Subject 7073 RVCLDRPTSICGCLVNNESSAFFVLNNTTSPNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI 7315
Range 7: 6977 to 7021 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
36.8 bits(74) | 0.0 | 15/15(100%) | 0/15(0%) | Minus/Minus |
Query 3 FSG*HFSVPLTVIED 47 FSG*HFSVPLTVIED Subject 6977 FSG*HFSVPLTVIED 7021
Range 8: 6976 to 7131 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.1 bits(282) | 0.0 | 52/52(100%) | 0/52(0%) | Minus/Minus |
Query 2 GSCTNTRQRLFQPRHQ*FQLAFWTVISLPAYPYH*RPFQGNTFPFPLRSLRT 157 GSCTNTRQRLFQPRHQ*FQLAFWTVISLPAYPYH*RPFQGNTFPFPLRSLRT Subject 6976 GSCTNTRQRLFQPRHQ*FQLAFWTVISLPAYPYH*RPFQGNTFPFPLRSLRT 7131
Grapevine leafroll associated virus 3 isolate ISAB BR, complete genome
Sequence ID: KX701860.1 Length: 18020 Number of Matches: 9
Range 1: 6493 to 6831 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
285.6 bits(617) | 0.0 | 112/113(99%) | 0/113(0%) | Minus/Minus |
Query 1 CMS*QTNKYMRLFSEQ*VICLLCPEQHHITECFSLCFMYCHHWCFFPFSLQRPLHIRLLQLGHAQIHVSVYFSHVISSSNWPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQ 339 CMS*QTNKYMRLFSEQ*VICLLCPEQHHITECFSLCFMYCHHWCFFPFSLQRPLHIRLLQLGHAQIHV VYFSHVISSSNWPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQ Subject 6493 CMS*QTNKYMRLFSEQ*VICLLCPEQHHITECFSLCFMYCHHWCFFPFSLQRPLHIRLLQLGHAQIHVGVYFSHVISSSNWPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQ 6831
Range 2: 6493 to 6831 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
265.3 bits(578) | 0.0 | 112/113(99%) | 0/113(0%) | Plus/Plus |
Query 1 LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFGDVVLFRTKKADDSLFTKQPHILVGLSRHT 339 LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAE+NADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFGDVVLFRTKKADDSLFTKQPHILVGLSRHT Subject 6493 LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEVNADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFGDVVLFRTKKADDSLFTKQPHILVGLSRHT 6831
Range 3: 6686 to 6832 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.0 bits(273) | 0.0 | 49/49(100%) | 0/49(0%) | Plus/Plus |
Query 194 EKGKKHQ**QYMKHREKHSVMWCCSGQRRQMTHCSLNNRIYLLVCQDIH 340 EKGKKHQ**QYMKHREKHSVMWCCSGQRRQMTHCSLNNRIYLLVCQDIH Subject 6686 EKGKKHQ**QYMKHREKHSVMWCCSGQRRQMTHCSLNNRIYLLVCQDIH 6832
Range 4: 6494 to 6655 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.9 bits(264) | 0.0 | 53/54(98%) | 0/54(0%) | Plus/Plus |
Query 2 CPQ*P*GERKSVTLKRSLVVRISR**DHCPKGQLELLMTWLK*TLTCICA*PSW 163 CPQ*P*GERKSVTLKRSLVVRISR**DHCPKGQLELLMTWLK*T TCICA*PSW Subject 6494 CPQ*P*GERKSVTLKRSLVVRISR**DHCPKGQLELLMTWLK*TPTCICA*PSW 6655
Range 5: 6495 to 6833 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
221.0 bits(476) | 0.0 | 111/113(98%) | 0/113(0%) | Plus/Plus |
Query 3 VLNDRKGNGKVLP*KGR*W*G*AGSEITVQKANWNY**RG*NKR*RVFVHDPXXXXXXXXXXXXKRERNTSDDST*STGKNIR*CGVVQDKEGR*LIVH*TTAYTCWSVKTYT 341 VLNDRKGNGKVLP*KGR*W*G*AGSEITVQKANWNY**RG*+KR RVFVHDPVGEVGYEEVVEGKRERNTSDDST*STGKNIR*CGVVQDKEGR*LIVH*TTAYTCWSVKTYT Subject 6495 VLNDRKGNGKVLP*KGR*W*G*AGSEITVQKANWNY**RG*SKRRRVFVHDPVGEVGYEEVVEGKRERNTSDDST*STGKNIR*CGVVQDKEGR*LIVH*TTAYTCWSVKTYT 6833
Range 6: 6591 to 6833 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
199.9 bits(430) | 0.0 | 80/81(99%) | 0/81(0%) | Minus/Minus |
Query 99 RVCLDRPTSICGCLVNNESSAFFVLNNTTSPNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI 341 RVCLDRPTSICGCLVNNESSAFFVLNNTTSPNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAF SATSSVVPI Subject 6591 RVCLDRPTSICGCLVNNESSAFFVLNNTTSPNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFTSATSSVVPI 6833
Range 7: 6495 to 6539 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
36.8 bits(74) | 0.0 | 15/15(100%) | 0/15(0%) | Minus/Minus |
Query 3 FSG*HFSVPLTVIED 47 FSG*HFSVPLTVIED Subject 6495 FSG*HFSVPLTVIED 6539
Range 8: 6494 to 6649 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
127.5 bits(272) | 0.0 | 50/52(96%) | 0/52(0%) | Minus/Minus |
Query 2 GSCTNTRQRLFQPRHQ*FQLAFWTVISLPAYPYH*RPFQGNTFPFPLRSLRT 157 GSCTNTR+RL QPRHQ*FQLAFWTVISLPAYPYH*RPFQGNTFPFPLRSLRT Subject 6494 GSCTNTRRRLLQPRHQ*FQLAFWTVISLPAYPYH*RPFQGNTFPFPLRSLRT 6649
Grapevine leafroll associated virus 3, complete genome
Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 9
Range 1: 6975 to 7313 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
284.7 bits(615) | 0.0 | 112/113(99%) | 0/113(0%) | Minus/Minus |
Query 1 CMS*QTNKYMRLFSEQ*VICLLCPEQHHITECFSLCFMYCHHWCFFPFSLQRPLHIRLLQLGHAQIHVSVYFSHVISSSNWPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQ 339 CMS*QTNKYMRLFSEQ*VICLLCPEQHHITECFSLCFMYCHHWCFFPFSLQRPLHIRLLQLGHAQIHVSVY SHVISSSNWPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQ Subject 6975 CMS*QTNKYMRLFSEQ*VICLLCPEQHHITECFSLCFMYCHHWCFFPFSLQRPLHIRLLQLGHAQIHVSVYLSHVISSSNWPFGQ*SHYRLILTTNDLFRVTLFRSPYGH*GQ 7313
Range 2: 6975 to 7313 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
265.7 bits(579) | 0.0 | 113/113(100%) | 0/113(0%) | Plus/Plus |
Query 1 LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFGDVVLFRTKKADDSLFTKQPHILVGLSRHT 339 LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFGDVVLFRTKKADDSLFTKQPHILVGLSRHT Subject 6975 LSSMTVRGTEKCYPEKVVSGKDKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETPVMTVHEAQGKTFGDVVLFRTKKADDSLFTKQPHILVGLSRHT 7313
Range 3: 7168 to 7314 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.0 bits(273) | 0.0 | 49/49(100%) | 0/49(0%) | Plus/Plus |
Query 194 EKGKKHQ**QYMKHREKHSVMWCCSGQRRQMTHCSLNNRIYLLVCQDIH 340 EKGKKHQ**QYMKHREKHSVMWCCSGQRRQMTHCSLNNRIYLLVCQDIH Subject 7168 EKGKKHQ**QYMKHREKHSVMWCCSGQRRQMTHCSLNNRIYLLVCQDIH 7314
Range 4: 6976 to 7137 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
125.7 bits(268) | 0.0 | 53/54(98%) | 0/54(0%) | Plus/Plus |
Query 2 CPQ*P*GERKSVTLKRSLVVRISR**DHCPKGQLELLMTWLK*TLTCICA*PSW 163 CPQ*P*GERKSVTLKRSLVVRISR**DHCPKGQLELLMTWL+*TLTCICA*PSW Subject 6976 CPQ*P*GERKSVTLKRSLVVRISR**DHCPKGQLELLMTWLR*TLTCICA*PSW 7137
Range 5: 6977 to 7315 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
223.3 bits(481) | 0.0 | 112/113(99%) | 0/113(0%) | Plus/Plus |
Query 3 VLNDRKGNGKVLP*KGR*W*G*AGSEITVQKANWNY**RG*NKR*RVFVHDPXXXXXXXXXXXXKRERNTSDDST*STGKNIR*CGVVQDKEGR*LIVH*TTAYTCWSVKTYT 341 VLNDRKGNGKVLP*KGR*W*G*AGSEITVQKANWNY**RG*+KR*RVFVHDPVGEVGYEEVVEGKRERNTSDDST*STGKNIR*CGVVQDKEGR*LIVH*TTAYTCWSVKTYT Subject 6977 VLNDRKGNGKVLP*KGR*W*G*AGSEITVQKANWNY**RG*DKR*RVFVHDPVGEVGYEEVVEGKRERNTSDDST*STGKNIR*CGVVQDKEGR*LIVH*TTAYTCWSVKTYT 7315
Range 6: 7073 to 7315 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
202.2 bits(435) | 0.0 | 81/81(100%) | 0/81(0%) | Minus/Minus |
Query 99 RVCLDRPTSICGCLVNNESSAFFVLNNTTSPNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI 341 RVCLDRPTSICGCLVNNESSAFFVLNNTTSPNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI Subject 7073 RVCLDRPTSICGCLVNNESSAFFVLNNTTSPNVFPCASCTVITGVSFPFPFNDLFISDFSNWVMHKYTSAFISATSSVVPI 7315
Range 7: 6977 to 7021 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
36.8 bits(74) | 0.0 | 15/15(100%) | 0/15(0%) | Minus/Minus |
Query 3 FSG*HFSVPLTVIED 47 FSG*HFSVPLTVIED Subject 6977 FSG*HFSVPLTVIED 7021
Range 8: 6976 to 7131 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.4 bits(274) | 0.0 | 51/52(98%) | 0/52(0%) | Minus/Minus |
Query 2 GSCTNTRQRLFQPRHQ*FQLAFWTVISLPAYPYH*RPFQGNTFPFPLRSLRT 157 GSCTNTRQRL QPRHQ*FQLAFWTVISLPAYPYH*RPFQGNTFPFPLRSLRT Subject 6976 GSCTNTRQRLSQPRHQ*FQLAFWTVISLPAYPYH*RPFQGNTFPFPLRSLRT 7131
Nucleotide Sequence (192 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
150.0 | 641.0 | 33% | 2.383e-35 | 100% | JX559645.1 | |
150.0 | 593.8 | 33% | 2.383e-35 | 91% | NC_004667.1 | |
150.0 | 635.5 | 33% | 2.383e-35 | 98% | KP844580.1 | |
150.0 | 593.8 | 33% | 2.383e-35 | 91% | AF037268.2 | |
150.0 | 641.0 | 33% | 2.383e-35 | 100% | GQ352631.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 6
Range 1: 8497 to 8685 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
150.0 bits(321) | 0.0 | 63/63(100%) | 0/63(0%) | Plus/Plus |
Query 2 VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF 190 VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF Subject 8497 VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF 8685
Range 2: 8498 to 8686 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
147.2 bits(315) | 0.0 | 63/63(100%) | 0/63(0%) | Minus/Minus |
Query 3 KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*V 191 KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*V Subject 8498 KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*V 8686
Range 3: 8496 to 8630 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
95.5 bits(202) | 0.0 | 45/45(100%) | 0/45(0%) | Plus/Plus |
Query 1 ST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P 135 ST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P Subject 8496 ST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P 8630
Range 4: 8612 to 8686 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.8 bits(111) | 0.0 | 25/25(100%) | 0/25(0%) | Plus/Plus |
Query 117 T*RYLTKLLLIFVLSF*FKSRIVSF 191 T*RYLTKLLLIFVLSF*FKSRIVSF Subject 8612 T*RYLTKLLLIFVLSF*FKSRIVSF 8686
Range 5: 8547 to 8687 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
108.3 bits(230) | 0.0 | 47/47(100%) | 0/47(0%) | Minus/Minus |
Query 52 KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR 192 KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR Subject 8547 KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR 8687
Range 6: 8497 to 8685 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
86.3 bits(182) | 0.0 | 63/63(100%) | 0/63(0%) | Minus/Minus |
Query 2 KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQXXXXXXXRLPTKYEAXXXXXXXXXXX*SPKY 190 KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQNRRINI*RLPTKYEAIITTNYNITII*SPKY Subject 8497 KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQNRRINI*RLPTKYEAIITTNYNITII*SPKY 8685
Grapevine leafroll associated virus 3, complete genome
Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 6
Range 1: 7918 to 8106 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
150.0 bits(321) | 0.0 | 63/63(100%) | 0/63(0%) | Plus/Plus |
Query 2 VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF 190 VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF Subject 7918 VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF 8106
Range 2: 7919 to 8107 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
134.4 bits(287) | 0.0 | 59/63(94%) | 0/63(0%) | Minus/Minus |
Query 3 KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*V 191 KRDYPRLELKT*NKN EQLG* SLRQNQNYRSEPTYQY TAAD*I*GYHH *LQYNYNLIP*V Subject 7919 KRDYPRLELKT*NKNMEQLG*KSLRQNQNYRSEPTYQYPTAAD*I*GYHHR*LQYNYNLIP*V 8107
Range 3: 7917 to 8051 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
81.3 bits(171) | 0.0 | 41/45(91%) | 0/45(0%) | Plus/Plus |
Query 1 ST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P 135 ST*GIRL*LYCS* ***P+I*SAAV Y*YVGSER*FWF*RKD *P Subject 7917 ST*GIRL*LYCS*R***PYI*SAAVGY*YVGSER*FWF*RKDF*P 8051
Range 4: 8033 to 8107 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.7 bits(100) | 0.0 | 23/25(92%) | 0/25(0%) | Plus/Plus |
Query 117 T*RYLTKLLLIFVLSF*FKSRIVSF 191 T*R+LTKLL IFVLSF*FKSRIVSF Subject 8033 T*RFLTKLLHIFVLSF*FKSRIVSF 8107
Range 5: 7968 to 8108 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.4 bits(215) | 0.0 | 44/47(94%) | 0/47(0%) | Minus/Minus |
Query 52 KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR 192 KKRLSST*TKNLEQK GAAWL IFTSKPKLSLRTDVSISNGCRLN+R Subject 7968 KKRLSST*TKNLEQKYGAAWLKIFTSKPKLSLRTDVSISNGCRLNIR 8108
Range 6: 7918 to 8106 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.0 bits(164) | 0.0 | 58/63(92%) | 0/63(0%) | Minus/Minus |
Query 2 KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQXXXXXXXRLPTKYEAXXXXXXXXXXX*SPKY 190 KETILDLN*KLRTKI SSLVK LYVKTKIIAQNRRINI RLPTKY+AIIT NYNITII*SPKY Subject 7918 KETILDLN*KLRTKIWSSLVKNLYVKTKIIAQNRRINIQRLPTKYKAIITANYNITII*SPKY 8106
Grapevine leafroll associated virus 3 isolate IB 31 RNA dependent RNA polymerase gene, partial cds
Sequence ID: KP844580.1 Length: 954 Number of Matches: 6
Range 1: 701 to 889 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
150.0 bits(321) | 0.0 | 63/63(100%) | 0/63(0%) | Plus/Plus |
Query 2 VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF 190 VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF Subject 701 VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF 889
Range 2: 702 to 890 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.0 bits(308) | 0.0 | 62/63(98%) | 0/63(0%) | Minus/Minus |
Query 3 KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*V 191 KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRS PTYQYLTAAD*I*GYHHH*LQYNYNLIP*V Subject 702 KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSGPTYQYLTAAD*I*GYHHH*LQYNYNLIP*V 890
Range 3: 700 to 834 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
93.2 bits(197) | 0.0 | 44/45(98%) | 0/45(0%) | Plus/Plus |
Query 1 ST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P 135 ST*GIRL*LYCS*W***PHI*SAAVRY*YVG ER*FWF*RKDI*P Subject 700 ST*GIRL*LYCS*W***PHI*SAAVRY*YVGPER*FWF*RKDI*P 834
Range 4: 816 to 890 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.8 bits(111) | 0.0 | 25/25(100%) | 0/25(0%) | Plus/Plus |
Query 117 T*RYLTKLLLIFVLSF*FKSRIVSF 191 T*RYLTKLLLIFVLSF*FKSRIVSF Subject 816 T*RYLTKLLLIFVLSF*FKSRIVSF 890
Range 5: 751 to 891 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
108.3 bits(230) | 0.0 | 47/47(100%) | 0/47(0%) | Minus/Minus |
Query 52 KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR 192 KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR Subject 751 KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR 891
Range 6: 701 to 889 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
86.3 bits(182) | 0.0 | 62/63(98%) | 0/63(0%) | Minus/Minus |
Query 2 KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQXXXXXXXRLPTKYEAXXXXXXXXXXX*SPKY 190 KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQ+RRINI*RLPTKYEAIITTNYNITII*SPKY Subject 701 KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQDRRINI*RLPTKYEAIITTNYNITII*SPKY 889
Grapevine leafroll associated virus 3, complete genome
Sequence ID: AF037268.2 Length: 17919 Number of Matches: 6
Range 1: 7918 to 8106 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
150.0 bits(321) | 0.0 | 63/63(100%) | 0/63(0%) | Plus/Plus |
Query 2 VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF 190 VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF Subject 7918 VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF 8106
Range 2: 7919 to 8107 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
134.4 bits(287) | 0.0 | 59/63(94%) | 0/63(0%) | Minus/Minus |
Query 3 KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*V 191 KRDYPRLELKT*NKN EQLG* SLRQNQNYRSEPTYQY TAAD*I*GYHH *LQYNYNLIP*V Subject 7919 KRDYPRLELKT*NKNMEQLG*KSLRQNQNYRSEPTYQYPTAAD*I*GYHHR*LQYNYNLIP*V 8107
Range 3: 7917 to 8051 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
81.3 bits(171) | 0.0 | 41/45(91%) | 0/45(0%) | Plus/Plus |
Query 1 ST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P 135 ST*GIRL*LYCS* ***P+I*SAAV Y*YVGSER*FWF*RKD *P Subject 7917 ST*GIRL*LYCS*R***PYI*SAAVGY*YVGSER*FWF*RKDF*P 8051
Range 4: 8033 to 8107 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.7 bits(100) | 0.0 | 23/25(92%) | 0/25(0%) | Plus/Plus |
Query 117 T*RYLTKLLLIFVLSF*FKSRIVSF 191 T*R+LTKLL IFVLSF*FKSRIVSF Subject 8033 T*RFLTKLLHIFVLSF*FKSRIVSF 8107
Range 5: 7968 to 8108 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.4 bits(215) | 0.0 | 44/47(94%) | 0/47(0%) | Minus/Minus |
Query 52 KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR 192 KKRLSST*TKNLEQK GAAWL IFTSKPKLSLRTDVSISNGCRLN+R Subject 7968 KKRLSST*TKNLEQKYGAAWLKIFTSKPKLSLRTDVSISNGCRLNIR 8108
Range 6: 7918 to 8106 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.0 bits(164) | 0.0 | 58/63(92%) | 0/63(0%) | Minus/Minus |
Query 2 KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQXXXXXXXRLPTKYEAXXXXXXXXXXX*SPKY 190 KETILDLN*KLRTKI SSLVK LYVKTKIIAQNRRINI RLPTKY+AIIT NYNITII*SPKY Subject 7918 KETILDLN*KLRTKIWSSLVKNLYVKTKIIAQNRRINIQRLPTKYKAIITANYNITII*SPKY 8106
Grapevine leafroll associated virus 3 isolate 621, complete genome
Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 6
Range 1: 8497 to 8685 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
150.0 bits(321) | 0.0 | 63/63(100%) | 0/63(0%) | Plus/Plus |
Query 2 VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF 190 VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF Subject 8497 VLRGLDYSYIVVSGDDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLF 8685
Range 2: 8498 to 8686 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
147.2 bits(315) | 0.0 | 63/63(100%) | 0/63(0%) | Minus/Minus |
Query 3 KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*V 191 KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*V Subject 8498 KRDYPRLELKT*NKNKEQLG*ISLRQNQNYRSEPTYQYLTAAD*I*GYHHH*LQYNYNLIP*V 8686
Range 3: 8496 to 8630 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
95.5 bits(202) | 0.0 | 45/45(100%) | 0/45(0%) | Plus/Plus |
Query 1 ST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P 135 ST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P Subject 8496 ST*GIRL*LYCS*W***PHI*SAAVRY*YVGSER*FWF*RKDI*P 8630
Range 4: 8612 to 8686 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.8 bits(111) | 0.0 | 25/25(100%) | 0/25(0%) | Plus/Plus |
Query 117 T*RYLTKLLLIFVLSF*FKSRIVSF 191 T*RYLTKLLLIFVLSF*FKSRIVSF Subject 8612 T*RYLTKLLLIFVLSF*FKSRIVSF 8686
Range 5: 8547 to 8687 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
108.3 bits(230) | 0.0 | 47/47(100%) | 0/47(0%) | Minus/Minus |
Query 52 KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR 192 KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR Subject 8547 KKRLSST*TKNLEQK*GAAWLNIFTSKPKLSLRTDVSISNGCRLNMR 8687
Range 6: 8497 to 8685 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
86.3 bits(182) | 0.0 | 63/63(100%) | 0/63(0%) | Minus/Minus |
Query 2 KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQXXXXXXXRLPTKYEAXXXXXXXXXXX*SPKY 190 KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQNRRINI*RLPTKYEAIITTNYNITII*SPKY Subject 8497 KETILDLN*KLRTKIRSSLVKYLYVKTKIIAQNRRINI*RLPTKYEAIITTNYNITII*SPKY 8685
Nucleotide Sequence (104 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
84.9 | 489.9 | 34% | 5.918e-16 | 100% | JX559645.1 | |
84.9 | 489.9 | 34% | 5.918e-16 | 100% | NC_004667.1 | |
84.9 | 489.9 | 34% | 5.918e-16 | 100% | KJ174518.1 | |
84.9 | 489.9 | 34% | 5.918e-16 | 100% | KP866976.1 | |
84.9 | 489.9 | 34% | 5.918e-16 | 100% | KP866977.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 6
Range 1: 11406 to 11507 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
84.9 bits(179) | 0.0 | 34/34(100%) | 0/34(0%) | Minus/Minus |
Query 2 LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIR 103 LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIR Subject 11406 LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIR 11507
Range 2: 11405 to 11506 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
83.0 bits(175) | 0.0 | 34/34(100%) | 0/34(0%) | Minus/Minus |
Query 1 STPPSTGIRCCVIALLLDKSSFIEDTNIPNLASD 102 STPPSTGIRCCVIALLLDKSSFIEDTNIPNLASD Subject 11405 STPPSTGIRCCVIALLLDKSSFIEDTNIPNLASD 11506
Range 3: 11407 to 11508 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
82.2 bits(173) | 0.0 | 34/34(100%) | 0/34(0%) | Minus/Minus |
Query 3 PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQ 104 PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQ Subject 11407 PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQ 11508
Range 4: 11405 to 11506 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
81.7 bits(172) | 0.0 | 34/34(100%) | 0/34(0%) | Plus/Plus |
Query 1 V*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGCG 102 V*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGCG Subject 11405 V*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGCG 11506
Grapevine leafroll associated virus 3, complete genome
Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 6
Range 1: 10827 to 10928 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
84.9 bits(179) | 0.0 | 34/34(100%) | 0/34(0%) | Minus/Minus |
Query 2 LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIR 103 LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIR Subject 10827 LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIR 10928
Range 2: 10826 to 10927 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
83.0 bits(175) | 0.0 | 34/34(100%) | 0/34(0%) | Minus/Minus |
Query 1 STPPSTGIRCCVIALLLDKSSFIEDTNIPNLASD 102 STPPSTGIRCCVIALLLDKSSFIEDTNIPNLASD Subject 10826 STPPSTGIRCCVIALLLDKSSFIEDTNIPNLASD 10927
Range 3: 10828 to 10929 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
82.2 bits(173) | 0.0 | 34/34(100%) | 0/34(0%) | Minus/Minus |
Query 3 PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQ 104 PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQ Subject 10828 PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQ 10929
Range 4: 10826 to 10927 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
81.7 bits(172) | 0.0 | 34/34(100%) | 0/34(0%) | Plus/Plus |
Query 1 V*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGCG 102 V*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGCG Subject 10826 V*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGCG 10927
Grapevine leafroll associated virus 3, complete genome
Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 6
Range 1: 11406 to 11507 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
84.9 bits(179) | 0.0 | 34/34(100%) | 0/34(0%) | Minus/Minus |
Query 2 LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIR 103 LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIR Subject 11406 LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIR 11507
Range 2: 11405 to 11506 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
83.0 bits(175) | 0.0 | 34/34(100%) | 0/34(0%) | Minus/Minus |
Query 1 STPPSTGIRCCVIALLLDKSSFIEDTNIPNLASD 102 STPPSTGIRCCVIALLLDKSSFIEDTNIPNLASD Subject 11405 STPPSTGIRCCVIALLLDKSSFIEDTNIPNLASD 11506
Range 3: 11407 to 11508 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
82.2 bits(173) | 0.0 | 34/34(100%) | 0/34(0%) | Minus/Minus |
Query 3 PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQ 104 PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQ Subject 11407 PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQ 11508
Range 4: 11405 to 11506 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
81.7 bits(172) | 0.0 | 34/34(100%) | 0/34(0%) | Plus/Plus |
Query 1 V*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGCG 102 V*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGCG Subject 11405 V*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGCG 11506
Grapevine leafroll associated virus 3 isolate DA 68 heat shock protein 70 like protein (HSP70) gene, partial cds
Sequence ID: KP866976.1 Length: 1140 Number of Matches: 6
Range 1: 464 to 565 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
84.9 bits(179) | 0.0 | 34/34(100%) | 0/34(0%) | Minus/Minus |
Query 2 LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIR 103 LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIR Subject 464 LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIR 565
Range 2: 463 to 564 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
83.0 bits(175) | 0.0 | 34/34(100%) | 0/34(0%) | Minus/Minus |
Query 1 STPPSTGIRCCVIALLLDKSSFIEDTNIPNLASD 102 STPPSTGIRCCVIALLLDKSSFIEDTNIPNLASD Subject 463 STPPSTGIRCCVIALLLDKSSFIEDTNIPNLASD 564
Range 3: 465 to 566 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
82.2 bits(173) | 0.0 | 34/34(100%) | 0/34(0%) | Minus/Minus |
Query 3 PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQ 104 PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQ Subject 465 PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQ 566
Range 4: 463 to 564 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
81.7 bits(172) | 0.0 | 34/34(100%) | 0/34(0%) | Plus/Plus |
Query 1 V*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGCG 102 V*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGCG Subject 463 V*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGCG 564
Grapevine leafroll associated virus 3 isolate DA 69 heat shock protein 70 like protein (HSP70) gene, partial cds
Sequence ID: KP866977.1 Length: 1140 Number of Matches: 6
Range 1: 464 to 565 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
84.9 bits(179) | 0.0 | 34/34(100%) | 0/34(0%) | Minus/Minus |
Query 2 LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIR 103 LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIR Subject 464 LHTPFYGDKVLRYSVIVRQVFLHRGYEYP*LGIR 565
Range 2: 463 to 564 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
83.0 bits(175) | 0.0 | 34/34(100%) | 0/34(0%) | Minus/Minus |
Query 1 STPPSTGIRCCVIALLLDKSSFIEDTNIPNLASD 102 STPPSTGIRCCVIALLLDKSSFIEDTNIPNLASD Subject 463 STPPSTGIRCCVIALLLDKSSFIEDTNIPNLASD 564
Range 3: 465 to 566 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
82.2 bits(173) | 0.0 | 34/34(100%) | 0/34(0%) | Minus/Minus |
Query 3 PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQ 104 PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQ Subject 465 PPHPLLRG*GVAL*RYC*TSLPSSRIRISLTWHQ 566
Range 4: 463 to 564 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
81.7 bits(172) | 0.0 | 34/34(100%) | 0/34(0%) | Plus/Plus |
Query 1 V*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGCG 102 V*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGCG Subject 463 V*CQVRDIRILDEGRLV*Q*RYNATPYPRRRGCG 564
Nucleotide Sequence (355 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
266.8 | 1473.5 | 34% | 7.812e-70 | 92% | JX559645.1 | |
266.8 | 1473.5 | 34% | 7.812e-70 | 92% | GU983863.1 | |
265.5 | 1465.7 | 34% | 2.026e-69 | 91% | KX756669.1 | |
265.3 | 1456.5 | 34% | 2.201e-69 | 91% | GQ352631.1 | |
264.1 | 1452.0 | 34% | 5.253e-69 | 90% | NC_004667.1 |
Alignments
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 6
Range 1: 11788 to 12141 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
266.8 bits(576) | 0.0 | 108/118(92%) | 0/118(0%) | Minus/Plus |
Query 1 WTL*RIR*RTGWWIFSRW*FSRRVVQYPVHILIDAQWVVGMWYSVYLKGRITGLF*MNRRAGAYRNVGETQWRPTWRSLISPRTDRCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE 354 WTL*RIR*RT WIFSRW*FSR+VVQYPVHILID QWVV MWY+VYLKGRIT LF*MNRR+GAYRNVGETQ RPTWRSLISPRT+RCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE Subject 11788 WTL*RIR*RTR*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE 12141
Range 2: 11787 to 12140 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
265.9 bits(574) | 0.0 | 109/118(92%) | 0/118(0%) | Plus/Minus |
Query 2 SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLHWVSPTFRYAPARRFI*KSPVILPFKYTEYHIPTTHCASMSI*TGYWTTLRENYHRLKIHHPVR*RIR*SVH 355 SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGL+WVSPTFRYAP RRFI*KS VILPFKYT YHI TTHC SMSI*TGYWTT RENYHRLKIH+ VR*RIR*SVH Subject 11787 SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVH 12140
Range 3: 11787 to 12140 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
265.3 bits(575) | 0.0 | 111/118(94%) | 0/118(0%) | Minus/Plus |
Query 2 VDTLANTLTDGVVDFQPVVIFPKGSPIPCSYTHRCTVGGGDVVFGIFEGENNRAFLNEPTCRGVSKRRGDPVEADVAQFNLSTDGSVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR 355 VDTL NTLTD VVDFQPVVIFPKGSPIPCSYTHR TVGGGDVV+GIFEGENNRAFLNEPT RGVSKRRGDPVE DVAQFNLSTDG+VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR Subject 11787 VDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR 12140
Range 4: 11788 to 12141 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
245.3 bits(529) | 0.0 | 111/118(94%) | 0/118(0%) | Plus/Minus |
Query 1 LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPIRPWRD*TAPRRPPLGLPYVSIRPGTSVHLEKPCYSPLQIYRIPHPHHPLCIYEYMNRVLDYPSGKLXXXXXXXXXXLAYSLKCP 354 LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTP RPWRD*TAPRR LGLPYVSIRPGTSVHLEK CYSPLQIYRIPH HHPLCIYEYMNRVLDY SGKLPPAENP PRPLAYSLKCP Subject 11788 LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCP 12141
Range 5: 11789 to 12139 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
215.1 bits(463) | 0.0 | 110/117(94%) | 0/117(0%) | Plus/Minus |
Query 3 LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTDPSVERLNCATSASTGSPLRFDTPRHVGSFRKALLFXXXXXXXXXXXXXXVHL*VYEQGIGLPFGKITTG*KSTTPSVSVFAKVS 353 LPDL*TNESSTFVVPGTRYSFFTSSPLTITDT PSVERLNCATS STGSPLRFDTPR+VGSFRKALLFSPSNIP TTSPPPTV+L*VYEQGIGLPFGKITTG*KSTT SVSVF KVS Subject 11789 LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKITTG*KSTTSSVSVFVKVS 12139
Range 6: 11789 to 12139 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
215.1 bits(463) | 0.0 | 108/117(92%) | 0/117(0%) | Minus/Plus |
Query 3 GHFSEYXXXXXXXXXXXXXFPEG*SNTLFIYS*MHSGWWGCGIRYI*RGE*QGFSK*TDVPGRIET*GRPSGGRRGAV*SLHGRIGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE 353 GHF+EYANGRG GFSAGGNFPE *SNTLFIYS*+HSGWW CGIRYI*RGE*Q FSK*TDVPGRIET*GRPS RRGAV*SLHGR GVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE Subject 11789 GHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE 12139
Grapevine leafroll associated virus 3 isolate WA MR, complete genome
Sequence ID: GU983863.1 Length: 18498 Number of Matches: 6
Range 1: 11788 to 12141 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
266.8 bits(576) | 0.0 | 108/118(92%) | 0/118(0%) | Minus/Plus |
Query 1 WTL*RIR*RTGWWIFSRW*FSRRVVQYPVHILIDAQWVVGMWYSVYLKGRITGLF*MNRRAGAYRNVGETQWRPTWRSLISPRTDRCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE 354 WTL*RIR*RT WIFSRW*FSR+VVQYPVHILID QWVV MWY+VYLKGRIT LF*MNRR+GAYRNVGETQ RPTWRSLISPRT+RCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE Subject 11788 WTL*RIR*RTR*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE 12141
Range 2: 11787 to 12140 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
265.9 bits(574) | 0.0 | 109/118(92%) | 0/118(0%) | Plus/Minus |
Query 2 SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLHWVSPTFRYAPARRFI*KSPVILPFKYTEYHIPTTHCASMSI*TGYWTTLRENYHRLKIHHPVR*RIR*SVH 355 SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGL+WVSPTFRYAP RRFI*KS VILPFKYT YHI TTHC SMSI*TGYWTT RENYHRLKIH+ VR*RIR*SVH Subject 11787 SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVH 12140
Range 3: 11787 to 12140 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
265.3 bits(575) | 0.0 | 111/118(94%) | 0/118(0%) | Minus/Plus |
Query 2 VDTLANTLTDGVVDFQPVVIFPKGSPIPCSYTHRCTVGGGDVVFGIFEGENNRAFLNEPTCRGVSKRRGDPVEADVAQFNLSTDGSVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR 355 VDTL NTLTD VVDFQPVVIFPKGSPIPCSYTHR TVGGGDVV+GIFEGENNRAFLNEPT RGVSKRRGDPVE DVAQFNLSTDG+VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR Subject 11787 VDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR 12140
Range 4: 11788 to 12141 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
245.3 bits(529) | 0.0 | 111/118(94%) | 0/118(0%) | Plus/Minus |
Query 1 LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPIRPWRD*TAPRRPPLGLPYVSIRPGTSVHLEKPCYSPLQIYRIPHPHHPLCIYEYMNRVLDYPSGKLXXXXXXXXXXLAYSLKCP 354 LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTP RPWRD*TAPRR LGLPYVSIRPGTSVHLEK CYSPLQIYRIPH HHPLCIYEYMNRVLDY SGKLPPAENP PRPLAYSLKCP Subject 11788 LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCP 12141
Range 5: 11789 to 12139 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
215.1 bits(463) | 0.0 | 110/117(94%) | 0/117(0%) | Plus/Minus |
Query 3 LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTDPSVERLNCATSASTGSPLRFDTPRHVGSFRKALLFXXXXXXXXXXXXXXVHL*VYEQGIGLPFGKITTG*KSTTPSVSVFAKVS 353 LPDL*TNESSTFVVPGTRYSFFTSSPLTITDT PSVERLNCATS STGSPLRFDTPR+VGSFRKALLFSPSNIP TTSPPPTV+L*VYEQGIGLPFGKITTG*KSTT SVSVF KVS Subject 11789 LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKITTG*KSTTSSVSVFVKVS 12139
Range 6: 11789 to 12139 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
215.1 bits(463) | 0.0 | 108/117(92%) | 0/117(0%) | Minus/Plus |
Query 3 GHFSEYXXXXXXXXXXXXXFPEG*SNTLFIYS*MHSGWWGCGIRYI*RGE*QGFSK*TDVPGRIET*GRPSGGRRGAV*SLHGRIGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE 353 GHF+EYANGRG GFSAGGNFPE *SNTLFIYS*+HSGWW CGIRYI*RGE*Q FSK*TDVPGRIET*GRPS RRGAV*SLHGR GVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE Subject 11789 GHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE 12139
Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome
Sequence ID: KX756669.1 Length: 18313 Number of Matches: 6
Range 1: 11603 to 11956 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
265.5 bits(573) | 0.0 | 107/118(91%) | 0/118(0%) | Minus/Plus |
Query 1 WTL*RIR*RTGWWIFSRW*FSRRVVQYPVHILIDAQWVVGMWYSVYLKGRITGLF*MNRRAGAYRNVGETQWRPTWRSLISPRTDRCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE 354 WTL*RIR*RT WIFSRW*FSR+VVQYPVHILID QWVV MWY+VYLKGRIT LF*MNRR+GAYRNVGETQ RPTWRSLISPRT+RCLLSLMVRK*+MNIWYPGQQTYWIHWSINLGE Subject 11603 WTL*RIR*RTR*WIFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*KMNIWYPGQQTYWIHWSINLGE 11956
Range 2: 11602 to 11955 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
265.3 bits(575) | 0.0 | 111/118(94%) | 0/118(0%) | Minus/Plus |
Query 2 VDTLANTLTDGVVDFQPVVIFPKGSPIPCSYTHRCTVGGGDVVFGIFEGENNRAFLNEPTCRGVSKRRGDPVEADVAQFNLSTDGSVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR 355 VDTL NTLTD VVDFQPVVIFPKGSPIPCSYTHR TVGGGDVV+GIFEGENNRAFLNEPT RGVSKRRGDPVE DVAQFNLSTDG+VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR Subject 11602 VDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR 11955
Range 3: 11602 to 11955 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
264.1 bits(570) | 0.0 | 108/118(92%) | 0/118(0%) | Plus/Minus |
Query 2 SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLHWVSPTFRYAPARRFI*KSPVILPFKYTEYHIPTTHCASMSI*TGYWTTLRENYHRLKIHHPVR*RIR*SVH 355 SPRFIDQ*IQYVCCPGYQIFI YFLTINDNRHRSVRGEIKLRHVGL+WVSPTFRYAP RRFI*KS VILPFKYT YHI TTHC SMSI*TGYWTT RENYHRLKIH+ VR*RIR*SVH Subject 11602 SPRFIDQ*IQYVCCPGYQIFIFYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVH 11955
Range 4: 11603 to 11956 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
242.5 bits(523) | 0.0 | 110/118(93%) | 0/118(0%) | Plus/Minus |
Query 1 LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPIRPWRD*TAPRRPPLGLPYVSIRPGTSVHLEKPCYSPLQIYRIPHPHHPLCIYEYMNRVLDYPSGKLXXXXXXXXXXLAYSLKCP 354 LSQIYRPMNPVRLLSRVPDIH LLPHH*R*QTP RPWRD*TAPRR LGLPYVSIRPGTSVHLEK CYSPLQIYRIPH HHPLCIYEYMNRVLDY SGKLPPAENP PRPLAYSLKCP Subject 11603 LSQIYRPMNPVRLLSRVPDIHFLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCP 11956
Range 5: 11604 to 11954 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
215.1 bits(463) | 0.0 | 110/117(94%) | 0/117(0%) | Plus/Minus |
Query 3 LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTDPSVERLNCATSASTGSPLRFDTPRHVGSFRKALLFXXXXXXXXXXXXXXVHL*VYEQGIGLPFGKITTG*KSTTPSVSVFAKVS 353 LPDL*TNESSTFVVPGTRYSFFTSSPLTITDT PSVERLNCATS STGSPLRFDTPR+VGSFRKALLFSPSNIP TTSPPPTV+L*VYEQGIGLPFGKITTG*KSTT SVSVF KVS Subject 11604 LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKITTG*KSTTSSVSVFVKVS 11954
Range 6: 11604 to 11954 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
213.2 bits(459) | 0.0 | 107/117(91%) | 0/117(0%) | Minus/Plus |
Query 3 GHFSEYXXXXXXXXXXXXXFPEG*SNTLFIYS*MHSGWWGCGIRYI*RGE*QGFSK*TDVPGRIET*GRPSGGRRGAV*SLHGRIGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE 353 GHF+EYANGRG GFSAGGNFPE *SNTLFIYS*+HSGWW CGIRYI*RGE*Q FSK*TDVPGRIET*GRPS RRGAV*SLHGR GVCYR*W*GSK+*ISGTRDNKRTGFIGL*IWE Subject 11604 GHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKK*ISGTRDNKRTGFIGL*IWE 11954
Grapevine leafroll associated virus 3 isolate 621, complete genome
Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 6
Range 1: 11787 to 12140 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
265.3 bits(575) | 0.0 | 111/118(94%) | 0/118(0%) | Minus/Plus |
Query 2 VDTLANTLTDGVVDFQPVVIFPKGSPIPCSYTHRCTVGGGDVVFGIFEGENNRAFLNEPTCRGVSKRRGDPVEADVAQFNLSTDGSVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR 355 VDTL NTLTD VVDFQPVVIFPKGSPIPCSYTHR TVGGGDVV+GIFEGENNRAFLNEPT RGVSKRRGDPVE DVAQFNLSTDG+VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR Subject 11787 VDTLTNTLTDEVVDFQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR 12140
Range 2: 11787 to 12140 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
263.2 bits(568) | 0.0 | 108/118(92%) | 0/118(0%) | Plus/Minus |
Query 2 SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLHWVSPTFRYAPARRFI*KSPVILPFKYTEYHIPTTHCASMSI*TGYWTTLRENYHRLKIHHPVR*RIR*SVH 355 SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGL+WVSPTFRYAP RRFI*KS VILPFKYT Y+I TTHC SMSI*TGYWTT RENYHRLKIH+ VR*RIR*SVH Subject 11787 SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRFI*KSSVILPFKYTVYYISTTHCVSMSI*TGYWTTFRENYHRLKIHYLVR*RIR*SVH 12140
Range 3: 11788 to 12141 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
260.0 bits(561) | 0.0 | 107/118(91%) | 0/118(0%) | Minus/Plus |
Query 1 WTL*RIR*RTGWWIFSRW*FSRRVVQYPVHILIDAQWVVGMWYSVYLKGRITGLF*MNRRAGAYRNVGETQWRPTWRSLISPRTDRCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE 354 WTL*RIR*RT WIFSRW*FSR+VVQYPVHILID QWVV M Y+VYLKGRIT LF*MNRR+GAYRNVGETQ RPTWRSLISPRT+RCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE Subject 11788 WTL*RIR*RTR*WIFSRW*FSRKVVQYPVHILIDTQWVVEM*YTVYLKGRITELF*MNRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE 12141
Range 4: 11788 to 12141 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
240.7 bits(519) | 0.0 | 110/118(93%) | 0/118(0%) | Plus/Minus |
Query 1 LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPIRPWRD*TAPRRPPLGLPYVSIRPGTSVHLEKPCYSPLQIYRIPHPHHPLCIYEYMNRVLDYPSGKLXXXXXXXXXXLAYSLKCP 354 LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTP RPWRD*TAPRR LGLPYVSIRPGTSVHLEK CYSPLQIYRI H HHPLCIYEYMNRVLDY SGKLPPAENP PRPLAYSLKCP Subject 11788 LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSVHLEKLCYSPLQIYRILHLHHPLCIYEYMNRVLDYLSGKLPPAENPLPRPLAYSLKCP 12141
Range 5: 11789 to 12139 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
215.1 bits(463) | 0.0 | 110/117(94%) | 0/117(0%) | Plus/Minus |
Query 3 LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTDPSVERLNCATSASTGSPLRFDTPRHVGSFRKALLFXXXXXXXXXXXXXXVHL*VYEQGIGLPFGKITTG*KSTTPSVSVFAKVS 353 LPDL*TNESSTFVVPGTRYSFFTSSPLTITDT PSVERLNCATS STGSPLRFDTPR+VGSFRKALLFSPSNIP TTSPPPTV+L*VYEQGIGLPFGKITTG*KSTT SVSVF KVS Subject 11789 LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKITTG*KSTTSSVSVFVKVS 12139
Range 6: 11789 to 12139 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
212.3 bits(457) | 0.0 | 107/117(91%) | 0/117(0%) | Minus/Plus |
Query 3 GHFSEYXXXXXXXXXXXXXFPEG*SNTLFIYS*MHSGWWGCGIRYI*RGE*QGFSK*TDVPGRIET*GRPSGGRRGAV*SLHGRIGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE 353 GHF+EYANGRG GFSAGGNFPE *SNTLFIYS*+HSGWW C IRYI*RGE*Q FSK*TDVPGRIET*GRPS RRGAV*SLHGR GVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE Subject 11789 GHFNEYANGRGSGFSAGGNFPER*SNTLFIYS*IHSGWWRCSIRYI*RGE*QSFSK*TDVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE 12139
Grapevine leafroll associated virus 3, complete genome
Sequence ID: NC_004667.1 Length: 17919 Number of Matches: 6
Range 1: 11209 to 11562 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
264.1 bits(570) | 0.0 | 106/118(90%) | 0/118(0%) | Minus/Plus |
Query 1 WTL*RIR*RTGWWIFSRW*FSRRVVQYPVHILIDAQWVVGMWYSVYLKGRITGLF*MNRRAGAYRNVGETQWRPTWRSLISPRTDRCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE 354 WTL*RIR*RT W+FSRW*FSR+VVQYPVHILID QWVV MWY+VYLKGRIT LF*M+RR+GAYRNVGETQ RPTWRSLISPRT+RCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE Subject 11209 WTL*RIR*RTR*WVFSRW*FSRKVVQYPVHILIDTQWVVEMWYTVYLKGRITELF*MSRRSGAYRNVGETQ*RPTWRSLISPRTERCLLSLMVRK*RMNIWYPGQQTYWIHWSINLGE 11562
Range 2: 11208 to 11561 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
260.9 bits(563) | 0.0 | 107/118(91%) | 0/118(0%) | Plus/Minus |
Query 2 SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLHWVSPTFRYAPARRFI*KSPVILPFKYTEYHIPTTHCASMSI*TGYWTTLRENYHRLKIHHPVR*RIR*SVH 355 SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGL+WVSPTFRYAP RR I*KS VILPFKYT YHI TTHC SMSI*TGYWTT RENYHRLK H+ VR*RIR*SVH Subject 11208 SPRFIDQ*IQYVCCPGYQIFILYFLTINDNRHRSVRGEIKLRHVGLYWVSPTFRYAPERRLI*KSSVILPFKYTVYHISTTHCVSMSI*TGYWTTFRENYHRLKTHYLVR*RIR*SVH 11561
Range 3: 11208 to 11561 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
259.4 bits(562) | 0.0 | 109/118(92%) | 0/118(0%) | Minus/Plus |
Query 2 VDTLANTLTDGVVDFQPVVIFPKGSPIPCSYTHRCTVGGGDVVFGIFEGENNRAFLNEPTCRGVSKRRGDPVEADVAQFNLSTDGSVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR 355 VDTL NTLTD VV QPVVIFPKGSPIPCSYTHR TVGGGDVV+GIFEGENNRAFLNEPT RGVSKRRGDPVE DVAQFNLSTDG+VSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR Subject 11208 VDTLTNTLTDEVVGLQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGR 11561
Range 4: 11209 to 11562 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
243.5 bits(525) | 0.0 | 109/118(92%) | 0/118(0%) | Plus/Minus |
Query 1 LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPIRPWRD*TAPRRPPLGLPYVSIRPGTSVHLEKPCYSPLQIYRIPHPHHPLCIYEYMNRVLDYPSGKLXXXXXXXXXXLAYSLKCP 354 LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTP RPWRD*TAPRR LGLPYVSIRPGTS HLEK CYSPLQIYRIPH HHPLCIYEYMNRVLDY SGKLPPAE+P PRPLAYSLKCP Subject 11209 LSQIYRPMNPVRLLSRVPDIHSLLPHH*R*QTPFRPWRD*TAPRRSLLGLPYVSIRPGTSAHLEKLCYSPLQIYRIPHLHHPLCIYEYMNRVLDYLSGKLPPAEDPLPRPLAYSLKCP 11562
Range 5: 11210 to 11560 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
212.8 bits(458) | 0.0 | 106/117(91%) | 0/117(0%) | Minus/Plus |
Query 3 GHFSEYXXXXXXXXXXXXXFPEG*SNTLFIYS*MHSGWWGCGIRYI*RGE*QGFSK*TDVPGRIET*GRPSGGRRGAV*SLHGRIGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE 353 GHF+EYANGRG G SAGGNFPE *SNTLFIYS*+HSGWW CGIRYI*RGE*Q FSK* DVPGRIET*GRPS RRGAV*SLHGR GVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE Subject 11210 GHFNEYANGRGSGSSAGGNFPER*SNTLFIYS*IHSGWWRCGIRYI*RGE*QSFSK*ADVPGRIET*GRPSRDRRGAV*SLHGRNGVCYR*W*GSKE*ISGTRDNKRTGFIGL*IWE 11560
Range 6: 11210 to 11560 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
211.4 bits(455) | 0.0 | 108/117(92%) | 0/117(0%) | Plus/Minus |
Query 3 LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTDPSVERLNCATSASTGSPLRFDTPRHVGSFRKALLFXXXXXXXXXXXXXXVHL*VYEQGIGLPFGKITTG*KSTTPSVSVFAKVS 353 LPDL*TNESSTFVVPGTRYSFFTSSPLTITDT PSVERLNCATS STGSPLRFDTPR+VGSFRKALLFSPSNIP TTSPPPTV+L*VYEQGIGLPFGKITTG*+ TT SVSVF KVS Subject 11210 LPDL*TNESSTFVVPGTRYSFFTSSPLTITDTVPSVERLNCATSVSTGSPLRFDTPRNVGSFRKALLFSPSNIPYTTSPPPTVYL*VYEQGIGLPFGKITTG*RPTTSSVSVFVKVS 11560
Nucleotide Sequence (316 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
246.7 | 1165.4 | 38% | 7.456e-64 | 92% | KC731554.1 | |
246.7 | 1165.4 | 38% | 7.456e-64 | 92% | KM058745.1 | |
166.9 | 475.8 | 34% | 7.467e-40 | 48% | JX559645.1 | |
166.9 | 425.8 | 34% | 7.467e-40 | 39% | JQ423939.1 | |
166.9 | 481.3 | 34% | 7.467e-40 | 50% | KJ174518.1 |
Alignments
Grapevine leafroll associated virus 3 isolate GL3.GTG10 HSP70 mRNA, partial cds
Sequence ID: KC731554.1 Length: 517 Number of Matches: 10
Range 1: 179 to 493 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
246.7 bits(532) | 0.0 | 103/105(98%) | 0/105(0%) | Minus/Minus |
Query 1 NTSNRYAKSLKRLNDETALEGVVISGHRNNSG*DRR*RLSLTLQNQGP*KETYNINNPQKCIWSGTQTPHK*SAPAIELYRVSWFQFFNVTF*VIPRNSYPSLWV 315 + SNRYAKSLKRLNDETALEGVVISGHRNNSG*DRR*RLSLTLQNQGP*KETYNINNPQKCIWSGTQTPHK*SAPAIELYRVSWFQFFNVTF*VIPRNSYPSLWV Subject 179 DASNRYAKSLKRLNDETALEGVVISGHRNNSG*DRR*RLSLTLQNQGP*KETYNINNPQKCIWSGTQTPHK*SAPAIELYRVSWFQFFNVTF*VIPRNSYPSLWV 493
Range 2: 180 to 488 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
240.3 bits(518) | 0.0 | 103/103(100%) | 0/103(0%) | Plus/Plus |
Query 2 TQRDG*ELRGIT*NVTLKN*NQLTR*SSIAGALYLWGVWVPDQIHF*GLLILYVSF*GPWFWSVRDKRHLRSQPLLLRCPLITTPSSAVSSFKRLRDLAYRLE 310 TQRDG*ELRGIT*NVTLKN*NQLTR*SSIAGALYLWGVWVPDQIHF*GLLILYVSF*GPWFWSVRDKRHLRSQPLLLRCPLITTPSSAVSSFKRLRDLAYRLE Subject 180 TQRDG*ELRGIT*NVTLKN*NQLTR*SSIAGALYLWGVWVPDQIHF*GLLILYVSF*GPWFWSVRDKRHLRSQPLLLRCPLITTPSSAVSSFKRLRDLAYRLE 488
Range 3: 179 to 493 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
176.6 bits(379) | 0.0 | 105/105(100%) | 0/105(0%) | Plus/Plus |
Query 1 NPKRWVGVTRDNLERYVEKLKPTYTIKFDXXXXXXXXXXXXXPDTLLRVVDIICLFLRALVLECERQXXXXXXXXXXXXXXDYNSFKRSFVVQALKGLGIPVRGV 315 NPKRWVGVTRDNLERYVEKLKPTYTIKFDSGGALLMGGLGSGPDTLLRVVDIICLFLRALVLECERQTSSTVSAAVVTVPADYNSFKRSFVVQALKGLGIPVRGV Subject 179 NPKRWVGVTRDNLERYVEKLKPTYTIKFDSGGALLMGGLGSGPDTLLRVVDIICLFLRALVLECERQTSSTVSAAVVTVPADYNSFKRSFVVQALKGLGIPVRGV 493
Range 4: 181 to 492 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
166.9 bits(358) | 0.0 | 104/104(100%) | 0/104(0%) | Minus/Minus |
Query 3 TPLTGMPSPLSA*TTKLRLKEL*SAGXXXXXXXXXXXVCLSHSKTRALKKRHIISTTLRSVSGXXXXXXXXXXXPLSNFIV*VGFNFST*RSKLSLVTPTHLFG 314 TPLTGMPSPLSA*TTKLRLKEL*SAGTVTTAAETVDDVCLSHSKTRALKKRHIISTTLRSVSGPEPKPPISKAPPLSNFIV*VGFNFST*RSKLSLVTPTHLFG Subject 181 TPLTGMPSPLSA*TTKLRLKEL*SAGTVTTAAETVDDVCLSHSKTRALKKRHIISTTLRSVSGPEPKPPISKAPPLSNFIV*VGFNFST*RSKLSLVTPTHLFG 492
Range 5: 316 to 414 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
85.4 bits(180) | 0.0 | 33/33(100%) | 0/33(0%) | Plus/Plus |
Query 138 SEGC*YYMSLFKGPGFGV*ETNVIYGLSRCCYG 236 SEGC*YYMSLFKGPGFGV*ETNVIYGLSRCCYG Subject 316 SEGC*YYMSLFKGPGFGV*ETNVIYGLSRCCYG 414
Range 6: 181 to 261 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
63.4 bits(132) | 0.0 | 27/27(100%) | 0/27(0%) | Plus/Plus |
Query 3 PKEMGRSYEG*LRTLR*KIETNLHDKV 83 PKEMGRSYEG*LRTLR*KIETNLHDKV Subject 181 PKEMGRSYEG*LRTLR*KIETNLHDKV 261
Range 7: 454 to 489 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
30.4 bits(60) | 0.0 | 12/12(100%) | 0/12(0%) | Plus/Plus |
Query 276 SSA*GTWHTG*R 311 SSA*GTWHTG*R Subject 454 SSA*GTWHTG*R 489
Range 8: 306 to 386 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
68.0 bits(142) | 0.0 | 27/27(100%) | 0/27(0%) | Minus/Minus |
Query 128 MTFVSHTPKPGPLKRDI*YQQPSEVYL 208 MTFVSHTPKPGPLKRDI*YQQPSEVYL Subject 306 MTFVSHTPKPGPLKRDI*YQQPSEVYL 386
Grapevine leafroll associated virus 3 isolate GH24, complete genome
Sequence ID: KM058745.1 Length: 18493 Number of Matches: 10
Range 1: 10863 to 11177 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
246.7 bits(532) | 0.0 | 103/105(98%) | 0/105(0%) | Minus/Minus |
Query 1 NTSNRYAKSLKRLNDETALEGVVISGHRNNSG*DRR*RLSLTLQNQGP*KETYNINNPQKCIWSGTQTPHK*SAPAIELYRVSWFQFFNVTF*VIPRNSYPSLWV 315 + SNRYAKSLKRLNDETALEGVVISGHRNNSG*DRR*RLSLTLQNQGP*KETYNINNPQKCIWSGTQTPHK*SAPAIELYRVSWFQFFNVTF*VIPRNSYPSLWV Subject 10863 DASNRYAKSLKRLNDETALEGVVISGHRNNSG*DRR*RLSLTLQNQGP*KETYNINNPQKCIWSGTQTPHK*SAPAIELYRVSWFQFFNVTF*VIPRNSYPSLWV 11177
Range 2: 10864 to 11172 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
240.3 bits(518) | 0.0 | 103/103(100%) | 0/103(0%) | Plus/Plus |
Query 2 TQRDG*ELRGIT*NVTLKN*NQLTR*SSIAGALYLWGVWVPDQIHF*GLLILYVSF*GPWFWSVRDKRHLRSQPLLLRCPLITTPSSAVSSFKRLRDLAYRLE 310 TQRDG*ELRGIT*NVTLKN*NQLTR*SSIAGALYLWGVWVPDQIHF*GLLILYVSF*GPWFWSVRDKRHLRSQPLLLRCPLITTPSSAVSSFKRLRDLAYRLE Subject 10864 TQRDG*ELRGIT*NVTLKN*NQLTR*SSIAGALYLWGVWVPDQIHF*GLLILYVSF*GPWFWSVRDKRHLRSQPLLLRCPLITTPSSAVSSFKRLRDLAYRLE 11172
Range 3: 10863 to 11177 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
176.6 bits(379) | 0.0 | 105/105(100%) | 0/105(0%) | Plus/Plus |
Query 1 NPKRWVGVTRDNLERYVEKLKPTYTIKFDXXXXXXXXXXXXXPDTLLRVVDIICLFLRALVLECERQXXXXXXXXXXXXXXDYNSFKRSFVVQALKGLGIPVRGV 315 NPKRWVGVTRDNLERYVEKLKPTYTIKFDSGGALLMGGLGSGPDTLLRVVDIICLFLRALVLECERQTSSTVSAAVVTVPADYNSFKRSFVVQALKGLGIPVRGV Subject 10863 NPKRWVGVTRDNLERYVEKLKPTYTIKFDSGGALLMGGLGSGPDTLLRVVDIICLFLRALVLECERQTSSTVSAAVVTVPADYNSFKRSFVVQALKGLGIPVRGV 11177
Range 4: 10865 to 11176 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
166.9 bits(358) | 0.0 | 104/104(100%) | 0/104(0%) | Minus/Minus |
Query 3 TPLTGMPSPLSA*TTKLRLKEL*SAGXXXXXXXXXXXVCLSHSKTRALKKRHIISTTLRSVSGXXXXXXXXXXXPLSNFIV*VGFNFST*RSKLSLVTPTHLFG 314 TPLTGMPSPLSA*TTKLRLKEL*SAGTVTTAAETVDDVCLSHSKTRALKKRHIISTTLRSVSGPEPKPPISKAPPLSNFIV*VGFNFST*RSKLSLVTPTHLFG Subject 10865 TPLTGMPSPLSA*TTKLRLKEL*SAGTVTTAAETVDDVCLSHSKTRALKKRHIISTTLRSVSGPEPKPPISKAPPLSNFIV*VGFNFST*RSKLSLVTPTHLFG 11176
Range 5: 11000 to 11098 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
85.4 bits(180) | 0.0 | 33/33(100%) | 0/33(0%) | Plus/Plus |
Query 138 SEGC*YYMSLFKGPGFGV*ETNVIYGLSRCCYG 236 SEGC*YYMSLFKGPGFGV*ETNVIYGLSRCCYG Subject 11000 SEGC*YYMSLFKGPGFGV*ETNVIYGLSRCCYG 11098
Range 6: 10865 to 10945 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
63.4 bits(132) | 0.0 | 27/27(100%) | 0/27(0%) | Plus/Plus |
Query 3 PKEMGRSYEG*LRTLR*KIETNLHDKV 83 PKEMGRSYEG*LRTLR*KIETNLHDKV Subject 10865 PKEMGRSYEG*LRTLR*KIETNLHDKV 10945
Range 7: 11138 to 11173 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
30.4 bits(60) | 0.0 | 12/12(100%) | 0/12(0%) | Plus/Plus |
Query 276 SSA*GTWHTG*R 311 SSA*GTWHTG*R Subject 11138 SSA*GTWHTG*R 11173
Range 8: 10990 to 11070 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
68.0 bits(142) | 0.0 | 27/27(100%) | 0/27(0%) | Minus/Minus |
Query 128 MTFVSHTPKPGPLKRDI*YQQPSEVYL 208 MTFVSHTPKPGPLKRDI*YQQPSEVYL Subject 10990 MTFVSHTPKPGPLKRDI*YQQPSEVYL 11070
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 4
Range 1: 10863 to 11177 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
166.9 bits(358) | 0.0 | 95/105(90%) | 0/105(0%) | Plus/Plus |
Query 1 NPKRWVGVTRDNLERYVEKLKPTYTIKFDXXXXXXXXXXXXXPDTLLRVVDIICLFLRALVLECERQXXXXXXXXXXXXXXDYNSFKRSFVVQALKGLGIPVRGV 315 NPKRWVGVTRDN+ERYVEKLKPTYT+K DSGGALL+GGLGSGPDTLLRVVD+ICLFLRAL+LECER TS+TV+AAVVTVPADYNSFKRSFVV+ALKGLGIPVRGV Subject 10863 NPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGV 11177
Range 2: 10865 to 11176 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
125.7 bits(268) | 0.0 | 84/104(81%) | 0/104(0%) | Minus/Minus |
Query 3 TPLTGMPSPLSA*TTKLRLKEL*SAGXXXXXXXXXXXVCLSHSKTRALKKRHIISTTLRSVSGXXXXXXXXXXXPLSNFIV*VGFNFST*RSKLSLVTPTHLFG 314 TPLTG+P P SA TTKLRLKEL*SAGTVTTAA TV DV LSHS +ALK +HI STTL VSGPEPKPPI+KAPPLS F V VGFNFST*RS LSLVTPTHLFG Subject 10865 TPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFG 11176
Range 3: 10875 to 11177 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.9 bits(227) | 0.0 | 50/101(50%) | 0/101(0%) | Minus/Minus |
Query 13 NTSNRYAKSLKRLNDETALEGVVISGHRNNSG*DRR*RLSLTLQNQGP*KETYNINNPQKCIWSGTQTPHK*SAPAIELYRVSWFQFFNVTF*VIPRNSYP 315 NTSNRY K+ RLN+E + +GV++S +R NS +RR R+ LQ QG + TY +N+PQ +WSGT T + * A A+ L+ V F F +VTF VIPR++YP Subject 10875 NTSNRYTKTF*RLNNEASFKGVIVSWYRYNSCCNRRRRIPFALQYQGSQE*TYYVNDPQ*GVWSGT*TSN**GASAVYLHGVCRF*FLDVTFDVIPRHTYP 11177
Range 4: 10864 to 11178 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
76.2 bits(160) | 0.0 | 50/105(48%) | 0/105(0%) | Plus/Plus |
Query 2 TQRDG*ELRGIT*NVTLKN*NQLTR*SSIAGALYLWGVWVPDQIHF*GLLILYVSF*GPWFWSVRDKRHLRSQPLLLRCPLITTPSSAVSSFKRLRDLAYRLEVL 316 T++ G* RGIT NVT +N*N T * A A Y V VPDQ +*G L YV * P +WS + R R Q LL R L TP + S +R + L YRLEVL Subject 10864 TRKGG*V*RGITSNVTSRN*NLHTP*R*TAEAPY*LEV*VPDQTPY*GSLT*YVYS*EP*YWSAKGIRLRRLQQLL*RYQLTITPLNEASLLRR*KVLVYRLEVL 11178
Grapevine leafroll associated virus 3 isolate LN, complete genome
Sequence ID: JQ423939.1 Length: 18563 Number of Matches: 4
Range 1: 10928 to 11242 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
166.9 bits(358) | 0.0 | 94/105(90%) | 0/105(0%) | Plus/Plus |
Query 1 NPKRWVGVTRDNLERYVEKLKPTYTIKFDXXXXXXXXXXXXXPDTLLRVVDIICLFLRALVLECERQXXXXXXXXXXXXXXDYNSFKRSFVVQALKGLGIPVRGV 315 NPKRWVGVTRDN+ERY+EKLKPTYT+K DSG ALL+GGLGSGPDTLLRVVDIICLFLRAL+LECER TS+TV+AAVVTVPADYNSFKRSFVV+ALKGLGIPVRGV Subject 10928 NPKRWVGVTRDNVERYIEKLKPTYTVKIDSGDALLIGGLGSGPDTLLRVVDIICLFLRALILECERYTSATVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGV 11242
Range 2: 10930 to 11241 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
125.7 bits(268) | 0.0 | 83/104(80%) | 0/104(0%) | Minus/Minus |
Query 3 TPLTGMPSPLSA*TTKLRLKEL*SAGXXXXXXXXXXXVCLSHSKTRALKKRHIISTTLRSVSGXXXXXXXXXXXPLSNFIV*VGFNFST*RSKLSLVTPTHLFG 314 TPLTGMP P +A TTKLRLKEL*SAGTVTTAA TV DV LSHS +ALK +HIISTTL VSGPEPKPPI+KA PLS F V VGFNFS *RS LSLVTPTHLFG Subject 10930 TPLTGMPRPFNASTTKLRLKEL*SAGTVTTAAVTVADVYLSHSSIKALKNKHIISTTLNKVSGPEPKPPINKASPLSIFTVYVGFNFSM*RSTLSLVTPTHLFG 11241
Range 3: 10940 to 11242 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
85.4 bits(180) | 0.0 | 42/101(42%) | 0/101(0%) | Minus/Minus |
Query 13 NTSNRYAKSLKRLNDETALEGVVISGHRNNSG*DRR*RLSLTLQNQGP*KETYNINNPQKCIWSGTQTPHK*SAPAIELYRVSWFQFFNVTF*VIPRNSYP 315 NT NR A++ +RLND+ + V++ +R +S +R + TLQ QG + TY INNPQ +W+GT T * A+ LY V F F NVT V+ R+++P Subject 10940 NTPNRNAETFQRLNDKAPFKRVIVGRYRYDSSRNRGGCIPFTLQYQGSQE*TYYINNPQ*GVWTGT*TSD**GISAVYLYGVRGF*FLNVTLDVVSRHTHP 11242
Range 4: 10929 to 11243 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
47.8 bits(98) | 0.0 | 41/105(39%) | 0/105(0%) | Plus/Plus |
Query 2 TQRDG*ELRGIT*NVTLKN*NQLTR*SSIAGALYLWGVWVPDQIHF*GLLILYVSF*GPWFWSVRDKRHLRSQPLLLRCPLITTPSSAVSSFKRLRDLAYRLEVL 316 T++ G R T +VTL+N*N T * A Y V VP Q +*GLLI YV * P +WSV+ R + L R T + S +R + A+RL VL Subject 10929 TRKGGWV*RETTSSVTLRN*NPRTP*R*TAEMPY*SEV*VPVQTPY*GLLI*YVYS*EP*YWSVKGIHPPRLRLLS*RYRPTITLLNGALSLRR*KVSAFRLGVL 11243
Grapevine leafroll associated virus 3, complete genome
Sequence ID: KJ174518.1 Length: 18498 Number of Matches: 4
Range 1: 10863 to 11177 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
166.9 bits(358) | 0.0 | 95/105(90%) | 0/105(0%) | Plus/Plus |
Query 1 NPKRWVGVTRDNLERYVEKLKPTYTIKFDXXXXXXXXXXXXXPDTLLRVVDIICLFLRALVLECERQXXXXXXXXXXXXXXDYNSFKRSFVVQALKGLGIPVRGV 315 NPKRWVGVTRDN+ERYVEKLKPTYT+K DSGGALL+GGLGSGPDTLLRVVD+ICLFLRAL+LECER TS+TV+AAVVTVPADYNSFKRSFVV+ALKGLGIPVRGV Subject 10863 NPKRWVGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGV 11177
Range 2: 10865 to 11176 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
125.7 bits(268) | 0.0 | 84/104(81%) | 0/104(0%) | Minus/Minus |
Query 3 TPLTGMPSPLSA*TTKLRLKEL*SAGXXXXXXXXXXXVCLSHSKTRALKKRHIISTTLRSVSGXXXXXXXXXXXPLSNFIV*VGFNFST*RSKLSLVTPTHLFG 314 TPLTG+P P SA TTKLRLKEL*SAGTVTTAA TV DV LSHS +ALK +HI STTL VSGPEPKPPI+KAPPLS F V VGFNFST*RS LSLVTPTHLFG Subject 10865 TPLTGIPRPFSASTTKLRLKEL*SAGTVTTAAVTVVDVYLSHSSIKALKNKHITSTTLNKVSGPEPKPPINKAPPLSIFTVYVGFNFST*RSTLSLVTPTHLFG 11176
Range 3: 10875 to 11177 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.5 bits(226) | 0.0 | 51/101(50%) | 0/101(0%) | Minus/Minus |
Query 13 NTSNRYAKSLKRLNDETALEGVVISGHRNNSG*DRR*RLSLTLQNQGP*KETYNINNPQKCIWSGTQTPHK*SAPAIELYRVSWFQFFNVTF*VIPRNSYP 315 NTSNRY K+ + LN+E + +GV+IS +R N G +R R+ TLQ QG + TY++N+PQ + SGT T * A A+ LY V F F NVTF VIPR++YP Subject 10875 NTSNRYTKTFQCLNNEASFKGVIISRYRYNCGCNRSRRIPFTLQYQGSQE*TYHVNDPQ*GVRSGT*TSD**GASAVYLYGVCGF*FLNVTFDVIPRHTYP 11177
Range 4: 10864 to 11178 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
82.2 bits(173) | 0.0 | 52/105(50%) | 0/105(0%) | Plus/Plus |
Query 2 TQRDG*ELRGIT*NVTLKN*NQLTR*SSIAGALYLWGVWVPDQIHF*GLLILYVSF*GPWFWSVRDKRHLRSQPLLLRCPLITTPSSAVSSFKRLRDLAYRLEVL 316 T++ G* RGIT NVTL+N*N T * A A Y V VPD+ +*G L YV * P +WSV+ R LR QP L R LI TP + S + + L YRLEVL Subject 10864 TRKGG*V*RGITSNVTLRN*NPHTP*R*TAEAPY*SEV*VPDRTPY*GSLT*YVYS*EP*YWSVKGIRLLRLQPQL*RYRLIITPLNEASLLRH*KVLVYRLEVL 11178
Nucleotide Sequence (1304 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
921.1 | 4943.4 | 31% | 0 | 84% | EU344893.1 | |
978.0 | 5205.7 | 31% | 0 | 93% | JX559645.1 | |
978.0 | 5231.3 | 27% | 0 | 93% | GU983863.1 | |
974.8 | 5199.7 | 31% | 0 | 93% | KX756669.1 | |
969.7 | 5143.7 | 27% | 0 | 92% | GQ352631.1 |
Alignments
Grapevine leafroll associated virus 3 isolate Cl 766, complete genome
Sequence ID: EU344893.1 Length: 17919 Number of Matches: 21
Range 1: 3303 to 4604 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
921.1 bits(2004) | 0.0 | 399/434(92%) | 0/434(0%) | Plus/Minus |
Query 3 SRNTWGGFLLDMWCGARNGXXXXXXXXXXLSRYFGLGDFWNSCWWYTLRTGLYWFPVAFVGCGLCCVVIYSSPPFLNRRITDVAFWKQPLVVHLNLTSRFPTRLLVKDIVDTFFHTFNKSHSVSGTRTRRITLSFRHSCRRGNLFLDVSVLHASR*MGLFFTSNFPVGVNPHVAHICDTIIA*DTRSGSITIVTGNRFMLSPRWTSTFVIVKVPVIPKRLIIHIPPLYRWDVSKLRYGVVKQTPYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARXXXXXXXXXL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRRHEYPDKHLIPQYESDEVI*GNFTPKKY 1304 SRNTWGGFLLD WCGARNGRRRHF*FHFFLSRYFGLGDFWNSCWWYTLRTGLYWFPVAFVGCGLCCVVIYSSPPFLNRRITDVAFWKQPLVVHLNLTSRFPTRLLVKDIVDTFFHTFNKSHSVSGTRTRRITLSFRHSCRRGNL LD+SVLHASR*MGLFFTSNFPVG NPHVAHICDTIIA*DTRSGSI IV GNRFMLSP WTSTFVIVKVPVIPKRLI+HIPPLYRWDVSKLRYGVVKQ PYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRP+QCP* KEKH*VP KSMCPNA*H AAGNGV*GRKR*QR GDLTFSYGRP DGH R KPS HD* STGYCA G TA*TT GL*T R *SFVTTARVPSSVSRNSAP+LPC+WG TQRRH+YP++HLIPQYES EVI GN TPK + Subject 3303 SRNTWGGFLLDKWCGARNGRRRHF*FHFFLSRYFGLGDFWNSCWWYTLRTGLYWFPVAFVGCGLCCVVIYSSPPFLNRRITDVAFWKQPLVVHLNLTSRFPTRLLVKDIVDTFFHTFNKSHSVSGTRTRRITLSFRHSCRRGNLILDISVLHASR*MGLFFTSNFPVGANPHVAHICDTIIA*DTRSGSIAIVIGNRFMLSPGWTSTFVIVKVPVIPKRLIVHIPPLYRWDVSKLRYGVVKQAPYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPEQCP*AKEKH*VPRKSMCPNA*HIAAGNGV*GRKR*QRQGDLTFSYGRPGDGHGR*KPSLHD**STGYCASGYTA*TTSGL*TQRV*SFVTTARVPSSVSRNSAPVLPCDWGHTQRRHKYPNEHLIPQYESGEVIQGNLTPKSF 4604
Range 2: 3526 to 4047 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
374.5 bits(811) | 0.0 | 160/174(92%) | 0/174(0%) | Plus/Minus |
Query 560 KWIHHYRHREPLHAESQMDQHLRHSQSPGNT*ASHHTHSSPLPVGRKQVEVWCR*ANPL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RSQPTKTLFARLKIHRILC 1081 KWIH YRHREPLHAES+MDQHLRHSQSPGNT*ASH THSSPLPVGRKQVEVWCR*A+PL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSP+AMSL+QRKTLSA EEHVPKCLTYCSRKWRMR*KTIA RGLDV*LRSP *R +P KTLFARL IHRILC Subject 3526 KWIHRYRHREPLHAESRMDQHLRHSQSPGNT*ASHRTHSSPLPVGRKQVEVWCR*ASPL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPRAMSLSQRKTLSAAEEHVPKCLTYCSRKWRMR*KTIAAPRGLDV*LRSPW*RPRPMKTLFARLMIHRILC 4047
Range 3: 4090 to 4389 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
251.7 bits(543) | 0.0 | 98/100(98%) | 0/100(0%) | Plus/Minus |
Query 218 SPLLESAHHRCRFLEATPCRPPQPHEPFPH*TVGERHRRHLFSHFQQKP*RQRYQNPTDHLVFPPQLQTGQPLPRRKCIARFEVNGSLLHQ*LPRWC*SP 517 SPLLESAHHRCRFLEATPCRPPQPHEPFPH*TVGERHRRHLFSHFQQKP*RQRYQNPTDHLVFPPQLQTGQP PR KCIARFEVNGSLLHQ*LPRWC*SP Subject 4090 SPLLESAHHRCRFLEATPCRPPQPHEPFPH*TVGERHRRHLFSHFQQKP*RQRYQNPTDHLVFPPQLQTGQPHPRHKCIARFEVNGSLLHQ*LPRWC*SP 4389
Range 4: 4367 to 4606 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
178.9 bits(384) | 0.0 | 79/80(99%) | 0/80(0%) | Plus/Minus |
Query 1 RVVTLGAGFSSTCGVALGTVVGGTSSFTSF*AGISDLATFGTAAGGTLSGLDCTGSLWPSSAAACAVLSSTALPPS*IGA 240 RVVTLGAGFSST GVALGTVVGGTSSFTSF*AGISDLATFGTAAGGTLSGLDCTGSLWPSSAAACAVLSSTALPPS*IGA Subject 4367 RVVTLGAGFSSTSGVALGTVVGGTSSFTSF*AGISDLATFGTAAGGTLSGLDCTGSLWPSSAAACAVLSSTALPPS*IGA 4606
Range 5: 3310 to 3483 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.9 bits(240) | 0.0 | 49/58(84%) | 0/58(0%) | Plus/Minus |
Query 1124 TSLEFRNYCPRTF*R*PQFRAYTSMQLGPHPKTPRISR*APYSAIRK**SHLRKLHSK 1297 TSLEFRNYCPRTF* *PQFRA TSM+LGPHPKTP+IS+*APYSAIRK * H RK HSK Subject 3310 TSLEFRNYCPRTF*C*PQFRACTSMRLGPHPKTPQISQ*APYSAIRKW*GHSRKPHSK 3483
Range 6: 3310 to 3918 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
400.2 bits(867) | 0.0 | 180/203(89%) | 0/203(0%) | Minus/Plus |
Query 689 FGVKFP*MTSSLSYCGIRCLSGYSWRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGFXXXXXXXXXXXLNVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*GVCLTTPYLNLLTSH 1297 FGV+FP*MTS LSYCGIRC GY WRLWV PQ HGS GAELRLTLEGTRAVVTKL* R VHKP VVYAV*PLAQYPVD *SC+EGF R PS GRP*LNVKSP RCYRFLPHTPFPAA+C*AFGHMLF GT*CFSL *GHC GRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*G CLTTPYLNLLTSH Subject 3310 FGVRFP*MTSPLSYCGIRCSLGYLWRLWVWPQSHGSTGAELRLTLEGTRAVVTKL*TRCVHKPLVVYAV*PLAQYPVDH*SCKEGFHRPWPSPGRP*LNVKSPWRCYRFLPHTPFPAAIC*AFGHMLFRGT*CFSLA*GHCSGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*GACLTTPYLNLLTSH 3918
Range 7: 4273 to 4515 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
196.3 bits(422) | 0.0 | 81/81(100%) | 0/81(0%) | Minus/Plus |
Query 92 STMSFTNSLVGKRLVRLRWTTRGCFQKATSVMRRFKKGGEL*MTTQHKPQPTKATGNQYSPVLRVYHQQLFQKSPSPKYLL 334 STMSFTNSLVGKRLVRLRWTTRGCFQKATSVMRRFKKGGEL*MTTQHKPQPTKATGNQYSPVLRVYHQQLFQKSPSPKYLL Subject 4273 STMSFTNSLVGKRLVRLRWTTRGCFQKATSVMRRFKKGGEL*MTTQHKPQPTKATGNQYSPVLRVYHQQLFQKSPSPKYLL 4515
Range 8: 3958 to 4221 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
195.3 bits(420) | 0.0 | 82/88(93%) | 0/88(0%) | Minus/Plus |
Query 386 ITGTLTMTKVLVHLGLSMKRFPVTIVMDPLLVSQAMMVSQMCATWGLTPTGKLLVKKRPIHLEACNTLTSRKRLPRLQLWRKDKVIRR 649 ITGTLTMTKVLVH GLSMKRFP+TI MDPLLVSQAMMVSQMCATWGL PTGKLLVKKRPIHLEACNTL SR RLPRLQLWRKDKVIRR Subject 3958 ITGTLTMTKVLVHPGLSMKRFPMTIAMDPLLVSQAMMVSQMCATWGLAPTGKLLVKKRPIHLEACNTLMSRMRLPRLQLWRKDKVIRR 4221
Range 9: 4493 to 4606 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
97.3 bits(206) | 0.0 | 38/38(100%) | 0/38(0%) | Minus/Plus |
Query 1 RQVRNTCSERSETRSAADDRSERHTTCRGETRPKCYDS 114 RQVRNTCSERSETRSAADDRSERHTTCRGETRPKCYDS Subject 4493 RQVRNTCSERSETRSAADDRSERHTTCRGETRPKCYDS 4606
Range 10: 3311 to 4303 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
668.2 bits(1452) | 0.0 | 302/331(91%) | 0/331(0%) | Minus/Plus |
Query 304 LE*SFLK*LHHFRIAE*GAYRDIRGVFGCGPNCMEV*ARNCG*R*KVRGQ*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGCDRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKGFA*RHHTSTCLRPTGRGEECV**DA*VLPGL*L*RRCWSIWDSA*SGSR*R**WIHF*CLKL*WCHKCARRGD*HQRGSYW*RRDPFTSKRAIHLRRGRGCPVCSCGGKTR*SVGFWYR*RYGFXXXXXXXXXXCLSPTV*W 1296 LE* FL+* HHFRIAE*GA+ DI GVFGCGPN MEV ARNCG* *KVRGQ*LRNSKLV FTSR WFTR+N *HSIRWI SRAKRVF+G RH GDRS*TSSPL AIVFYLIRHFRLQYVRHLGTCSS ALNVFLW RDIA GEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKG A*RHHTSTCLRPTGRGEECV *DA*VLPGL*L*RRCWSI DSA*SGSR*R* WIHF*CLKL*WCHKCARRGD*HQRGSYW*RRDPFTSKRAIHL RG GCPVCSCGGKTR*SVGFWYR*RYGFC*KCEKRCRRCLSPTV*W Subject 3311 LE*GFLE*PHHFRIAE*GAHWDICGVFGCGPNRMEVQARNCG*H*KVRGQ*LRNSKLVVFTSRWWFTRYNH*HSIRWIISRAKRVFIGRGRHQGDRS*TSSPLGAAIVFYLIRHFRLQYVRHLGTCSSAALNVFLWLRDIARGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKGLA*RHHTSTCLRPTGRGEECVR*DA*VLPGL*L*RRCWSIRDSA*SGSR*R*RWIHF*CLKL*WCHKCARRGD*HQRGSYW*RRDPFTSKRAIHLCRG*GCPVCSCGGKTR*SVGFWYR*RYGFC*KCEKRCRRCLSPTV*W 4303
Range 11: 4506 to 4604 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
75.6 bits(159) | 0.0 | 32/33(97%) | 0/33(0%) | Minus/Plus |
Query 3 IPAQKEVKLEVPPTTVPSATPHVEEKPAPSVTT 101 IPAQKEVKLEVPPTTVPSATP VEEKPAPSVTT Subject 4506 IPAQKEVKLEVPPTTVPSATPLVEEKPAPSVTT 4604
Range 12: 4340 to 4390 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
41.8 bits(85) | 0.0 | 17/17(100%) | 0/17(0%) | Minus/Plus |
Query 217 VASRKRHR*CADSRRGE 267 VASRKRHR*CADSRRGE Subject 4340 VASRKRHR*CADSRRGE 4390
Range 13: 3573 to 4022 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
331.0 bits(718) | 0.0 | 148/150(99%) | 0/150(0%) | Minus/Plus |
Query 585 AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMXXXXXXXXXGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVP 1034 AV VTRATVAKRQVPLALLSFSTSYAISGC+MLGIWAHALPRHLMFFFGLGTLLGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVP Subject 3573 AVAVTRATVAKRQVPLALLSFSTSYAISGCNMLGIWAHALPRHLMFFFGLGTLLGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVP 4022
Range 14: 4077 to 4439 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
217.7 bits(470) | 0.0 | 119/121(98%) | 0/121(0%) | Minus/Plus |
Query 168 NVRDVGIXXXXXXXXXXXTHSPRSVQYTYXXXXXXXXXXXXERQGDPSGSGTADAMAFVESVKKGVDDVFHQQSSGETAREVEVDDKGLLPESDIGDAPIQEGGRAVDDNTAQAAADEGHR 530 NVRDVGI+TNGEVTGEEETHSPRSVQYTYVE+EVAPSAAVAERQGDPSGSGTADAMAFVESVKKGVDDVFHQQSSGETAREVEVDDKGLLPESDIGDAPIQEGGRAVDDNTAQAAADEGHR Subject 4077 NVRDVGISTNGEVTGEEETHSPRSVQYTYVEDEVAPSAAVAERQGDPSGSGTADAMAFVESVKKGVDDVFHQQSSGETAREVEVDDKGLLPESDIGDAPIQEGGRAVDDNTAQAAADEGHR 4439
Range 15: 3309 to 3458 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
111.2 bits(237) | 0.0 | 46/50(92%) | 0/50(0%) | Minus/Plus |
Query 1149 FWSEVSLNDFITFVLRNKVLIGIFVASLGAAPIAWKYRRGIAANARRYAG 1298 FWSEVSLND TFVLRNKVLIGIFVASLG APIAWKYRRGIAAN RRYAG Subject 3309 FWSEVSLNDLTTFVLRNKVLIGIFVASLGVAPIAWKYRRGIAANTRRYAG 3458
Range 16: 4549 to 4605 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
50.1 bits(103) | 0.0 | 18/19(95%) | 0/19(0%) | Minus/Plus |
Query 2 PFRAPHHMSRRNPPQVLRL 58 PFRAPHH+SRRNPPQVLRL Subject 4549 PFRAPHHLSRRNPPQVLRL 4605
Range 17: 3311 to 3940 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
428.1 bits(928) | 0.0 | 197/210(94%) | 0/210(0%) | Plus/Minus |
Query 667 YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVSXXXXXXXXXXXXIPRLYFHAIGAAPKDATNIPISTLFRNTKVMKSFKETSLQ 1296 YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDS+AKGT*RLATVALVT TADENPL TT DPPDTVL V PRKPPAACE NE RVS*LLPAYLL LAAIPRLYFHAIGA PKDATNIP+STLFRNTKV++SFKETSLQ Subject 3311 YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSSAKGT*RLATVALVTATADENPLCTTNDPPDTVLVVIPRKPPAACEHNEFRVS*LLPAYLLVLAAIPRLYFHAIGATPKDATNIPMSTLFRNTKVVRSFKETSLQ 3940
Range 18: 3983 to 4159 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.5 bits(226) | 0.0 | 58/59(98%) | 0/59(0%) | Plus/Minus |
Query 448 VYCTLRGEWXXXXXXXXXXXXIPTSRTFVTPS*LETLEVDPSLSSPGTASC*VPDGPAP 624 VYCTLRGEWVSSSPVTSPLVLIPTSRTFVTPS*LETLEVDPSLSS GTASC*VPDGPAP Subject 3983 VYCTLRGEWVSSSPVTSPLVLIPTSRTFVTPS*LETLEVDPSLSSSGTASC*VPDGPAP 4159
Range 19: 4202 to 4315 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
94.1 bits(199) | 0.0 | 38/38(100%) | 0/38(0%) | Plus/Minus |
Query 292 RAVSPLDCW*KTSSTPFFTLSTKAIASAVPEPDGSPCL 405 RAVSPLDCW*KTSSTPFFTLSTKAIASAVPEPDGSPCL Subject 4202 RAVSPLDCW*KTSSTPFFTLSTKAIASAVPEPDGSPCL 4315
Grapevine leafroll associated virus 3 isolate 3138 07, complete genome
Sequence ID: JX559645.1 Length: 18498 Number of Matches: 22
Range 1: 3888 to 5183 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
978.0 bits(2128) | 0.0 | 424/432(98%) | 0/432(0%) | Plus/Minus |
Query 3 SRNTWGGFLLDMWCGARNGXXXXXXXXXXLSRYFGLGDFWNSCWWYTLRTGLYWFPVAFVGCGLCCVVIYSSPPFLNRRITDVAFWKQPLVVHLNLTSRFPTRLLVKDIVDTFFHTFNKSHSVSGTRTRRITLSFRHSCRRGNLFLDVSVLHASR*MGLFFTSNFPVGVNPHVAHICDTIIA*DTRSGSITIVTGNRFMLSPRWTSTFVIVKVPVIPKRLIIHIPPLYRWDVSKLRYGVVKQTPYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARXXXXXXXXXL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRRHEYPDKHLIPQYESDEVI*GNFTPK 1298 SRNTWGGFLLD WCGARNGRRRHF*FHFFLSRYFGLGDFWNSCWWYTLRTGLYWFPVAFVGCGLCCVVIYSSPPFLNRRITDVAFWKQPLVVHLNLTSRFPTRLLVKDI DTFFHTFNKSHSVSGTRTRRITLSFRHSCRRGNLFLD+SVLHASR*MGLFFTSNFPVG NPHVAHICDTIIA*DTRSGSI IVTGNRFMLSPRWTSTFVIVKVPVIPKRLI+HIPPLYRWDVSKLRYGVVKQ PYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARG*TA*TTGGL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRRHEYPDKHLIPQYES EVI*GNFTPK Subject 3888 SRNTWGGFLLDKWCGARNGRRRHF*FHFFLSRYFGLGDFWNSCWWYTLRTGLYWFPVAFVGCGLCCVVIYSSPPFLNRRITDVAFWKQPLVVHLNLTSRFPTRLLVKDIFDTFFHTFNKSHSVSGTRTRRITLSFRHSCRRGNLFLDISVLHASR*MGLFFTSNFPVGANPHVAHICDTIIA*DTRSGSIVIVTGNRFMLSPRWTSTFVIVKVPVIPKRLIVHIPPLYRWDVSKLRYGVVKQAPYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARG*TA*TTGGL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRRHEYPDKHLIPQYESGEVI*GNFTPK 5183
Range 2: 4105 to 4626 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
396.5 bits(859) | 0.0 | 170/174(98%) | 0/174(0%) | Plus/Minus |
Query 560 KWIHHYRHREPLHAESQMDQHLRHSQSPGNT*ASHHTHSSPLPVGRKQVEVWCR*ANPL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RSQPTKTLFARLKIHRILC 1081 KWIH YR+REPLHAESQMDQHLRHSQSPGNT*ASH THSSPLPVGRKQVEVWCR*A+PL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RSQPTKTLFARLKIHRILC Subject 4105 KWIHRYRNREPLHAESQMDQHLRHSQSPGNT*ASHRTHSSPLPVGRKQVEVWCR*ASPL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RSQPTKTLFARLKIHRILC 4626
Range 3: 4669 to 4968 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
251.7 bits(543) | 0.0 | 98/100(98%) | 0/100(0%) | Plus/Minus |
Query 218 SPLLESAHHRCRFLEATPCRPPQPHEPFPH*TVGERHRRHLFSHFQQKP*RQRYQNPTDHLVFPPQLQTGQPLPRRKCIARFEVNGSLLHQ*LPRWC*SP 517 SPLLESAHHRCRFLEATPCRPPQPHEPFPH*TVGERH RHLFSHFQQKP*RQRYQNPTDHLVFPPQLQTGQPLPR KCIARFEVNGSLLHQ*LPRWC*SP Subject 4669 SPLLESAHHRCRFLEATPCRPPQPHEPFPH*TVGERHLRHLFSHFQQKP*RQRYQNPTDHLVFPPQLQTGQPLPRHKCIARFEVNGSLLHQ*LPRWC*SP 4968
Range 4: 4946 to 5185 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
178.9 bits(384) | 0.0 | 79/80(99%) | 0/80(0%) | Plus/Minus |
Query 1 RVVTLGAGFSSTCGVALGTVVGGTSSFTSF*AGISDLATFGTAAGGTLSGLDCTGSLWPSSAAACAVLSSTALPPS*IGA 240 RVVTLGAGFSST GVALGTVVGGTSSFTSF*AGISDLATFGTAAGGTLSGLDCTGSLWPSSAAACAVLSSTALPPS*IGA Subject 4946 RVVTLGAGFSSTSGVALGTVVGGTSSFTSF*AGISDLATFGTAAGGTLSGLDCTGSLWPSSAAACAVLSSTALPPS*IGA 5185
Range 5: 3889 to 4062 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.4 bits(274) | 0.0 | 56/58(97%) | 0/58(0%) | Plus/Minus |
Query 1124 TSLEFRNYCPRTF*R*PQFRAYTSMQLGPHPKTPRISR*APYSAIRK**SHLRKLHSK 1297 TSLEFRNY PRTF*R*PQFRAYTSMQLGPHPKTPRISR*APYSAIRK *SHLRKLHSK Subject 3889 TSLEFRNYRPRTF*R*PQFRAYTSMQLGPHPKTPRISR*APYSAIRKW*SHLRKLHSK 4062
Range 6: 4183 to 4497 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
251.7 bits(543) | 0.0 | 104/105(99%) | 0/105(0%) | Minus/Plus |
Query 689 NVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*GVCLTTPYLNLLTSH 1003 NVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*G CLTTPYLNLLTSH Subject 4183 NVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*GACLTTPYLNLLTSH 4497
Range 7: 4537 to 4800 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
202.7 bits(436) | 0.0 | 85/88(97%) | 0/88(0%) | Minus/Plus |
Query 386 ITGTLTMTKVLVHLGLSMKRFPVTIVMDPLLVSQAMMVSQMCATWGLTPTGKLLVKKRPIHLEACNTLTSRKRLPRLQLWRKDKVIRR 649 ITGTLTMTKVLVHLGLSMKRFPVTI MDPLLVSQAMMVSQMCATWGL PTGKLLVKKRPIHLEACNTL SRKRLPRLQLWRKDKVIRR Subject 4537 ITGTLTMTKVLVHLGLSMKRFPVTITMDPLLVSQAMMVSQMCATWGLAPTGKLLVKKRPIHLEACNTLMSRKRLPRLQLWRKDKVIRR 4800
Range 8: 3889 to 4146 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
201.3 bits(433) | 0.0 | 85/86(99%) | 0/86(0%) | Minus/Plus |
Query 1040 FGVKFP*MTSSLSYCGIRCLSGYSWRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGF 1297 FGVKFP*MTS LSYCGIRCLSGYSWRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGF Subject 3889 FGVKFP*MTSPLSYCGIRCLSGYSWRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGF 4146
Range 9: 4852 to 5094 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
193.5 bits(416) | 0.0 | 80/81(99%) | 0/81(0%) | Minus/Plus |
Query 92 STMSFTNSLVGKRLVRLRWTTRGCFQKATSVMRRFKKGGEL*MTTQHKPQPTKATGNQYSPVLRVYHQQLFQKSPSPKYLL 334 S MSFTNSLVGKRLVRLRWTTRGCFQKATSVMRRFKKGGEL*MTTQHKPQPTKATGNQYSPVLRVYHQQLFQKSPSPKYLL Subject 4852 SKMSFTNSLVGKRLVRLRWTTRGCFQKATSVMRRFKKGGEL*MTTQHKPQPTKATGNQYSPVLRVYHQQLFQKSPSPKYLL 5094
Range 10: 5072 to 5185 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
97.3 bits(206) | 0.0 | 38/38(100%) | 0/38(0%) | Minus/Plus |
Query 1 RQVRNTCSERSETRSAADDRSERHTTCRGETRPKCYDS 114 RQVRNTCSERSETRSAADDRSERHTTCRGETRPKCYDS Subject 5072 RQVRNTCSERSETRSAADDRSERHTTCRGETRPKCYDS 5185
Range 11: 3890 to 4882 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
742.0 bits(1613) | 0.0 | 325/331(98%) | 0/331(0%) | Minus/Plus |
Query 304 LE*SFLK*LHHFRIAE*GAYRDIRGVFGCGPNCMEV*ARNCG*R*KVRGQ*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGCDRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKGFA*RHHTSTCLRPTGRGEECV**DA*VLPGL*L*RRCWSIWDSA*SGSR*R**WIHF*CLKL*WCHKCARRGD*HQRGSYW*RRDPFTSKRAIHLRRGRGCPVCSCGGKTR*SVGFWYR*RYGFXXXXXXXXXXCLSPTV*W 1296 LE*SFLK*LHHFRIAE*GAYRDIRGVFGCGPNCMEV*ARNCG*R*KVRG+*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGCDRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKG A*RHHTSTCLRPTGRGEECV *DA*VLPGL*L*RRCWSIWDSA*SGSR R* WIHF*CLKL*WCHKCARRGD*HQRGSYW*RRDPFTSKRAIHL RGRGCPVCSCGGKTR*SVGFWYR*RYGFC*KCEKRCRRCLSPTV*W Subject 3890 LE*SFLK*LHHFRIAE*GAYRDIRGVFGCGPNCMEV*ARNCG*R*KVRGR*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGCDRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKGLA*RHHTSTCLRPTGRGEECVR*DA*VLPGL*L*RRCWSIWDSA*SGSRLR*RWIHF*CLKL*WCHKCARRGD*HQRGSYW*RRDPFTSKRAIHLCRGRGCPVCSCGGKTR*SVGFWYR*RYGFC*KCEKRCRRCLSPTV*W 4882
Range 12: 5085 to 5183 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
75.6 bits(159) | 0.0 | 32/33(97%) | 0/33(0%) | Minus/Plus |
Query 3 IPAQKEVKLEVPPTTVPSATPHVEEKPAPSVTT 101 IPAQKEVKLEVPPTTVPSATP VEEKPAPSVTT Subject 5085 IPAQKEVKLEVPPTTVPSATPLVEEKPAPSVTT 5183
Range 13: 4919 to 4969 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
41.8 bits(85) | 0.0 | 17/17(100%) | 0/17(0%) | Minus/Plus |
Query 217 VASRKRHR*CADSRRGE 267 VASRKRHR*CADSRRGE Subject 4919 VASRKRHR*CADSRRGE 4969
Range 14: 4152 to 4601 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
334.7 bits(726) | 0.0 | 150/150(100%) | 0/150(0%) | Minus/Plus |
Query 585 AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMXXXXXXXXXGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVP 1034 AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMFFFGLGTLLGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVP Subject 4152 AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMFFFGLGTLLGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVP 4601
Range 15: 4656 to 5018 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
215.8 bits(466) | 0.0 | 119/121(98%) | 0/121(0%) | Minus/Plus |
Query 168 NVRDVGIXXXXXXXXXXXTHSPRSVQYTYXXXXXXXXXXXXERQGDPSGSGTADAMAFVESVKKGVDDVFHQQSSGETAREVEVDDKGLLPESDIGDAPIQEGGRAVDDNTAQAAADEGHR 530 NVRDVGI+TNGEVTGEEETHSPRSVQYTYVEEEVAPSAAVAERQGDPSGSGTADAMAFVESVKKGV+DVFHQQSSGETAREVEVDDKGLLPESDIGDAPIQEGGRAVDDNTAQAAADEGHR Subject 4656 NVRDVGISTNGEVTGEEETHSPRSVQYTYVEEEVAPSAAVAERQGDPSGSGTADAMAFVESVKKGVEDVFHQQSSGETAREVEVDDKGLLPESDIGDAPIQEGGRAVDDNTAQAAADEGHR 5018
Range 16: 3888 to 4037 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
117.6 bits(251) | 0.0 | 49/50(98%) | 0/50(0%) | Minus/Plus |
Query 1149 FWSEVSLNDFITFVLRNKVLIGIFVASLGAAPIAWKYRRGIAANARRYAG 1298 FWSEVSLNDF TFVLRNKVLIGIFVASLGAAPIAWKYRRGIAANARRYAG Subject 3888 FWSEVSLNDFTTFVLRNKVLIGIFVASLGAAPIAWKYRRGIAANARRYAG 4037
Range 17: 5128 to 5184 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
50.1 bits(103) | 0.0 | 18/19(95%) | 0/19(0%) | Minus/Plus |
Query 2 PFRAPHHMSRRNPPQVLRL 58 PFRAPHH+SRRNPPQVLRL Subject 5128 PFRAPHHLSRRNPPQVLRL 5184
Range 18: 3884 to 4519 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
456.5 bits(990) | 0.0 | 209/212(99%) | 0/212(0%) | Plus/Minus |
Query 667 YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVSXXXXXXXXXXXXIPRLYFHAIGAAPKDATNIPISTLFRNTKVMKSFKETSLQKS 1302 YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVS*L PAYLLALAAIPRLYFHAIGAAPKDATNIPISTLFRNTKV+KSFKETSLQ S Subject 3884 YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVS*LPPAYLLALAAIPRLYFHAIGAAPKDATNIPISTLFRNTKVVKSFKETSLQNS 4519
Range 19: 4562 to 4738 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.5 bits(226) | 0.0 | 58/59(98%) | 0/59(0%) | Plus/Minus |
Query 448 VYCTLRGEWXXXXXXXXXXXXIPTSRTFVTPS*LETLEVDPSLSSPGTASC*VPDGPAP 624 VYCTLRGEWVSSSPVTSPLVLIPTSRTFVTPS*LETLEVDPSLS PGTASC*VPDGPAP Subject 4562 VYCTLRGEWVSSSPVTSPLVLIPTSRTFVTPS*LETLEVDPSLS*PGTASC*VPDGPAP 4738
Range 20: 4781 to 4894 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
94.1 bits(199) | 0.0 | 38/38(100%) | 0/38(0%) | Plus/Minus |
Query 292 RAVSPLDCW*KTSSTPFFTLSTKAIASAVPEPDGSPCL 405 RAVSPLDCW*KTSSTPFFTLSTKAIASAVPEPDGSPCL Subject 4781 RAVSPLDCW*KTSSTPFFTLSTKAIASAVPEPDGSPCL 4894
Grapevine leafroll associated virus 3 isolate WA MR, complete genome
Sequence ID: GU983863.1 Length: 18498 Number of Matches: 22
Range 1: 3888 to 5183 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
978.0 bits(2128) | 0.0 | 425/432(98%) | 0/432(0%) | Plus/Minus |
Query 3 SRNTWGGFLLDMWCGARNGXXXXXXXXXXLSRYFGLGDFWNSCWWYTLRTGLYWFPVAFVGCGLCCVVIYSSPPFLNRRITDVAFWKQPLVVHLNLTSRFPTRLLVKDIVDTFFHTFNKSHSVSGTRTRRITLSFRHSCRRGNLFLDVSVLHASR*MGLFFTSNFPVGVNPHVAHICDTIIA*DTRSGSITIVTGNRFMLSPRWTSTFVIVKVPVIPKRLIIHIPPLYRWDVSKLRYGVVKQTPYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARXXXXXXXXXL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRRHEYPDKHLIPQYESDEVI*GNFTPK 1298 SRNTWGGFLLD WCGARNGRRRHF*FHFFLSRYFGLGDFWNSCWWYTLRTGLYWFPVAFVGCGLCCVVIYSSPPFLNRRITDVAFWKQPLVVHLNLTSRFPTRLLVKDIVDTFFHTFNKSHSVSGTRTRRITLSFRHSCRRGNLFLD+SVLHASR*MGLFFTSNFPVG NPHVAHICDTII *DTRSGSI IVTGNRFMLSPRWTSTFVIVKVPVIPKRLIIHIPPLYRWDVSKLRYGVVKQ PYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARG*TA*TTGGL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRRHEYPDKHLIPQYES EVI*GNFTPK Subject 3888 SRNTWGGFLLDKWCGARNGRRRHF*FHFFLSRYFGLGDFWNSCWWYTLRTGLYWFPVAFVGCGLCCVVIYSSPPFLNRRITDVAFWKQPLVVHLNLTSRFPTRLLVKDIVDTFFHTFNKSHSVSGTRTRRITLSFRHSCRRGNLFLDISVLHASR*MGLFFTSNFPVGANPHVAHICDTIID*DTRSGSIAIVTGNRFMLSPRWTSTFVIVKVPVIPKRLIIHIPPLYRWDVSKLRYGVVKQAPYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARG*TA*TTGGL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRRHEYPDKHLIPQYESGEVI*GNFTPK 5183
Range 2: 4105 to 4626 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
403.4 bits(874) | 0.0 | 172/174(99%) | 0/174(0%) | Plus/Minus |
Query 560 KWIHHYRHREPLHAESQMDQHLRHSQSPGNT*ASHHTHSSPLPVGRKQVEVWCR*ANPL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RSQPTKTLFARLKIHRILC 1081 KWIH YRHREPLHAESQMDQHLRHSQSPGNT*ASHHTHSSPLPVGRKQVEVWCR*A+PL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RSQPTKTLFARLKIHRILC Subject 4105 KWIHRYRHREPLHAESQMDQHLRHSQSPGNT*ASHHTHSSPLPVGRKQVEVWCR*ASPL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RSQPTKTLFARLKIHRILC 4626
Range 3: 4669 to 4968 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
254.9 bits(550) | 0.0 | 99/100(99%) | 0/100(0%) | Plus/Minus |
Query 218 SPLLESAHHRCRFLEATPCRPPQPHEPFPH*TVGERHRRHLFSHFQQKP*RQRYQNPTDHLVFPPQLQTGQPLPRRKCIARFEVNGSLLHQ*LPRWC*SP 517 SPLLESAHHRCRFLEATPCRPPQPHEPFPH*TVGERHRRHLFSHFQQKP*RQRYQNPTDHLVFPPQLQTGQPLPR KCIARFEVNGSLLHQ*LPRWC*SP Subject 4669 SPLLESAHHRCRFLEATPCRPPQPHEPFPH*TVGERHRRHLFSHFQQKP*RQRYQNPTDHLVFPPQLQTGQPLPRHKCIARFEVNGSLLHQ*LPRWC*SP 4968
Range 4: 4946 to 5185 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
178.9 bits(384) | 0.0 | 79/80(99%) | 0/80(0%) | Plus/Minus |
Query 1 RVVTLGAGFSSTCGVALGTVVGGTSSFTSF*AGISDLATFGTAAGGTLSGLDCTGSLWPSSAAACAVLSSTALPPS*IGA 240 RVVTLGAGFSST GVALGTVVGGTSSFTSF*AGISDLATFGTAAGGTLSGLDCTGSLWPSSAAACAVLSSTALPPS*IGA Subject 4946 RVVTLGAGFSSTSGVALGTVVGGTSSFTSF*AGISDLATFGTAAGGTLSGLDCTGSLWPSSAAACAVLSSTALPPS*IGA 5185
Range 5: 3889 to 4062 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
133.9 bits(286) | 0.0 | 57/58(98%) | 0/58(0%) | Plus/Minus |
Query 1124 TSLEFRNYCPRTF*R*PQFRAYTSMQLGPHPKTPRISR*APYSAIRK**SHLRKLHSK 1297 TSLEFRNYCPRTF*R*PQFRAYTSMQLGPHPKTPRISR*APYSAIRK *SHLRKLHSK Subject 3889 TSLEFRNYCPRTF*R*PQFRAYTSMQLGPHPKTPRISR*APYSAIRKW*SHLRKLHSK 4062
Range 6: 4183 to 4497 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
251.7 bits(543) | 0.0 | 104/105(99%) | 0/105(0%) | Minus/Plus |
Query 689 NVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*GVCLTTPYLNLLTSH 1003 NVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*G CLTTPYLNLLTSH Subject 4183 NVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*GACLTTPYLNLLTSH 4497
Range 7: 3889 to 4146 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
201.3 bits(433) | 0.0 | 85/86(99%) | 0/86(0%) | Minus/Plus |
Query 1040 FGVKFP*MTSSLSYCGIRCLSGYSWRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGF 1297 FGVKFP*MTS LSYCGIRCLSGYSWRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGF Subject 3889 FGVKFP*MTSPLSYCGIRCLSGYSWRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGF 4146
Range 8: 4537 to 4800 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
201.3 bits(433) | 0.0 | 84/88(95%) | 0/88(0%) | Minus/Plus |
Query 386 ITGTLTMTKVLVHLGLSMKRFPVTIVMDPLLVSQAMMVSQMCATWGLTPTGKLLVKKRPIHLEACNTLTSRKRLPRLQLWRKDKVIRR 649 ITGTLTMTKVLVHLGLSMKRFPVTI MDPLLVSQ+MMVSQMCATWGL PTGKLLVKKRPIHLEACNTL SRKRLPRLQLWRKDKVIRR Subject 4537 ITGTLTMTKVLVHLGLSMKRFPVTIAMDPLLVSQSMMVSQMCATWGLAPTGKLLVKKRPIHLEACNTLMSRKRLPRLQLWRKDKVIRR 4800
Range 9: 4852 to 5094 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
196.3 bits(422) | 0.0 | 81/81(100%) | 0/81(0%) | Minus/Plus |
Query 92 STMSFTNSLVGKRLVRLRWTTRGCFQKATSVMRRFKKGGEL*MTTQHKPQPTKATGNQYSPVLRVYHQQLFQKSPSPKYLL 334 STMSFTNSLVGKRLVRLRWTTRGCFQKATSVMRRFKKGGEL*MTTQHKPQPTKATGNQYSPVLRVYHQQLFQKSPSPKYLL Subject 4852 STMSFTNSLVGKRLVRLRWTTRGCFQKATSVMRRFKKGGEL*MTTQHKPQPTKATGNQYSPVLRVYHQQLFQKSPSPKYLL 5094
Range 10: 5072 to 5185 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
97.3 bits(206) | 0.0 | 38/38(100%) | 0/38(0%) | Minus/Plus |
Query 1 RQVRNTCSERSETRSAADDRSERHTTCRGETRPKCYDS 114 RQVRNTCSERSETRSAADDRSERHTTCRGETRPKCYDS Subject 5072 RQVRNTCSERSETRSAADDRSERHTTCRGETRPKCYDS 5185
Range 11: 3890 to 4882 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
746.1 bits(1622) | 0.0 | 327/331(99%) | 0/331(0%) | Minus/Plus |
Query 304 LE*SFLK*LHHFRIAE*GAYRDIRGVFGCGPNCMEV*ARNCG*R*KVRGQ*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGCDRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKGFA*RHHTSTCLRPTGRGEECV**DA*VLPGL*L*RRCWSIWDSA*SGSR*R**WIHF*CLKL*WCHKCARRGD*HQRGSYW*RRDPFTSKRAIHLRRGRGCPVCSCGGKTR*SVGFWYR*RYGFXXXXXXXXXXCLSPTV*W 1296 LE*SFLK*LHHFRIAE*GAYRDIRGVFGCGPNCMEV*ARNCG*R*KVRGQ*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGCDRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKG A*RHHTSTCLRPTGRGEECV**DA*VLPGL*L*RRCWSIWDSA*SGSR*R* WIHF*CL L*WCHKCARRGD*HQRGSYW*RRDPFTSKRAIHL RGRGCPVCSCGGKTR*SVGFWYR*RYGFC*KCEKRCRRCLSPTV*W Subject 3890 LE*SFLK*LHHFRIAE*GAYRDIRGVFGCGPNCMEV*ARNCG*R*KVRGQ*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGCDRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKGLA*RHHTSTCLRPTGRGEECV**DA*VLPGL*L*RRCWSIWDSA*SGSR*R*RWIHF*CLNL*WCHKCARRGD*HQRGSYW*RRDPFTSKRAIHLCRGRGCPVCSCGGKTR*SVGFWYR*RYGFC*KCEKRCRRCLSPTV*W 4882
Range 12: 5085 to 5183 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
75.6 bits(159) | 0.0 | 32/33(97%) | 0/33(0%) | Minus/Plus |
Query 3 IPAQKEVKLEVPPTTVPSATPHVEEKPAPSVTT 101 IPAQKEVKLEVPPTTVPSATP VEEKPAPSVTT Subject 5085 IPAQKEVKLEVPPTTVPSATPLVEEKPAPSVTT 5183
Range 13: 4919 to 4969 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
41.8 bits(85) | 0.0 | 17/17(100%) | 0/17(0%) | Minus/Plus |
Query 217 VASRKRHR*CADSRRGE 267 VASRKRHR*CADSRRGE Subject 4919 VASRKRHR*CADSRRGE 4969
Range 14: 4152 to 4601 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
334.7 bits(726) | 0.0 | 150/150(100%) | 0/150(0%) | Minus/Plus |
Query 585 AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMXXXXXXXXXGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVP 1034 AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMFFFGLGTLLGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVP Subject 4152 AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMFFFGLGTLLGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVP 4601
Range 15: 4656 to 5018 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
217.7 bits(470) | 0.0 | 120/121(99%) | 0/121(0%) | Minus/Plus |
Query 168 NVRDVGIXXXXXXXXXXXTHSPRSVQYTYXXXXXXXXXXXXERQGDPSGSGTADAMAFVESVKKGVDDVFHQQSSGETAREVEVDDKGLLPESDIGDAPIQEGGRAVDDNTAQAAADEGHR 530 NVRDVGI+TNGEVTGEEETHSPRSVQYTYVEEEVAPSAAVAERQGDPSGSGTADAMAFVESVKKGVDDVFHQQSSGETAREVEVDDKGLLPESDIGDAPIQEGGRAVDDNTAQAAADEGHR Subject 4656 NVRDVGISTNGEVTGEEETHSPRSVQYTYVEEEVAPSAAVAERQGDPSGSGTADAMAFVESVKKGVDDVFHQQSSGETAREVEVDDKGLLPESDIGDAPIQEGGRAVDDNTAQAAADEGHR 5018
Range 16: 3888 to 4037 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
117.6 bits(251) | 0.0 | 49/50(98%) | 0/50(0%) | Minus/Plus |
Query 1149 FWSEVSLNDFITFVLRNKVLIGIFVASLGAAPIAWKYRRGIAANARRYAG 1298 FWSEVSLNDF TFVLRNKVLIGIFVASLGAAPIAWKYRRGIAANARRYAG Subject 3888 FWSEVSLNDFTTFVLRNKVLIGIFVASLGAAPIAWKYRRGIAANARRYAG 4037
Range 17: 5128 to 5184 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
50.1 bits(103) | 0.0 | 18/19(95%) | 0/19(0%) | Minus/Plus |
Query 2 PFRAPHHMSRRNPPQVLRL 58 PFRAPHH+SRRNPPQVLRL Subject 5128 PFRAPHHLSRRNPPQVLRL 5184
Range 18: 3884 to 4519 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
456.5 bits(990) | 0.0 | 210/212(99%) | 0/212(0%) | Plus/Minus |
Query 667 YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVSXXXXXXXXXXXXIPRLYFHAIGAAPKDATNIPISTLFRNTKVMKSFKETSLQKS 1302 YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVS*LLPAYLLALAAIPRLYFHAIGAAPKDATNIPISTLFRNTKV+KSFKETSLQ S Subject 3884 YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVS*LLPAYLLALAAIPRLYFHAIGAAPKDATNIPISTLFRNTKVVKSFKETSLQNS 4519
Range 19: 4562 to 4738 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
109.2 bits(232) | 0.0 | 58/59(98%) | 0/59(0%) | Plus/Minus |
Query 448 VYCTLRGEWXXXXXXXXXXXXIPTSRTFVTPS*LETLEVDPSLSSPGTASC*VPDGPAP 624 VYCTLRGEWVSSSPVTSPLVLIPTSRTFVTPS*+ETLEVDPSLSSPGTASC*VPDGPAP Subject 4562 VYCTLRGEWVSSSPVTSPLVLIPTSRTFVTPS*IETLEVDPSLSSPGTASC*VPDGPAP 4738
Range 20: 4781 to 4894 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
94.1 bits(199) | 0.0 | 38/38(100%) | 0/38(0%) | Plus/Minus |
Query 292 RAVSPLDCW*KTSSTPFFTLSTKAIASAVPEPDGSPCL 405 RAVSPLDCW*KTSSTPFFTLSTKAIASAVPEPDGSPCL Subject 4781 RAVSPLDCW*KTSSTPFFTLSTKAIASAVPEPDGSPCL 4894
Grapevine leafroll associated virus 3 isolate TRAJ BR, complete genome
Sequence ID: KX756669.1 Length: 18313 Number of Matches: 22
Range 1: 3703 to 4998 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
974.8 bits(2121) | 0.0 | 423/432(98%) | 0/432(0%) | Plus/Minus |
Query 3 SRNTWGGFLLDMWCGARNGXXXXXXXXXXLSRYFGLGDFWNSCWWYTLRTGLYWFPVAFVGCGLCCVVIYSSPPFLNRRITDVAFWKQPLVVHLNLTSRFPTRLLVKDIVDTFFHTFNKSHSVSGTRTRRITLSFRHSCRRGNLFLDVSVLHASR*MGLFFTSNFPVGVNPHVAHICDTIIA*DTRSGSITIVTGNRFMLSPRWTSTFVIVKVPVIPKRLIIHIPPLYRWDVSKLRYGVVKQTPYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARXXXXXXXXXL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRRHEYPDKHLIPQYESDEVI*GNFTPK 1298 SRNTWGGFLLD WCGARNGRRRHF*FHFFLSRYFGLGDFWNSCWWYTLRTGLYWFP AFVGCGLCCVVIYSSPPFLNR ITDVAFWKQPLVVHLNLTSRFPTRLLVKDIVDTFFHTFNKSHSVSGTRTRRITLSFRHSCRRGNLFLD+SVLHASR*MGLFFTSNFPVG NPHVAHICDTIIA*DTRSGSI IVTGNRFMLSPRWTSTFVIVKVPVIPKRLI+HIPPLYRWDVSKLRYGVVKQ PYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARG*TA*TTGGL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRRHEYPDKHLIPQYES EVI*GNFTPK Subject 3703 SRNTWGGFLLDKWCGARNGRRRHF*FHFFLSRYFGLGDFWNSCWWYTLRTGLYWFPDAFVGCGLCCVVIYSSPPFLNRHITDVAFWKQPLVVHLNLTSRFPTRLLVKDIVDTFFHTFNKSHSVSGTRTRRITLSFRHSCRRGNLFLDISVLHASR*MGLFFTSNFPVGANPHVAHICDTIIA*DTRSGSIAIVTGNRFMLSPRWTSTFVIVKVPVIPKRLIVHIPPLYRWDVSKLRYGVVKQAPYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARG*TA*TTGGL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRRHEYPDKHLIPQYESGEVI*GNFTPK 4998
Range 2: 3920 to 4441 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
399.7 bits(866) | 0.0 | 171/174(98%) | 0/174(0%) | Plus/Minus |
Query 560 KWIHHYRHREPLHAESQMDQHLRHSQSPGNT*ASHHTHSSPLPVGRKQVEVWCR*ANPL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RSQPTKTLFARLKIHRILC 1081 KWIH YRHREPLHAESQMDQHLRHSQSPGNT*ASH THSSPLPVGRKQVEVWCR*A+PL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RSQPTKTLFARLKIHRILC Subject 3920 KWIHRYRHREPLHAESQMDQHLRHSQSPGNT*ASHRTHSSPLPVGRKQVEVWCR*ASPL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RSQPTKTLFARLKIHRILC 4441
Range 3: 4484 to 4783 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
254.9 bits(550) | 0.0 | 99/100(99%) | 0/100(0%) | Plus/Minus |
Query 218 SPLLESAHHRCRFLEATPCRPPQPHEPFPH*TVGERHRRHLFSHFQQKP*RQRYQNPTDHLVFPPQLQTGQPLPRRKCIARFEVNGSLLHQ*LPRWC*SP 517 SPLLESAHHRCRFLEATPCRPPQPHEPFPH*TVGERHRRHLFSHFQQKP*RQRYQNPTDHLVFPPQLQTGQPLPR KCIARFEVNGSLLHQ*LPRWC*SP Subject 4484 SPLLESAHHRCRFLEATPCRPPQPHEPFPH*TVGERHRRHLFSHFQQKP*RQRYQNPTDHLVFPPQLQTGQPLPRHKCIARFEVNGSLLHQ*LPRWC*SP 4783
Range 4: 4764 to 5000 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
171.5 bits(368) | 0.0 | 77/79(97%) | 0/79(0%) | Plus/Minus |
Query 1 RVVTLGAGFSSTCGVALGTVVGGTSSFTSF*AGISDLATFGTAAGGTLSGLDCTGSLWPSSAAACAVLSSTALPPS*IG 237 RVVTLGAGFSST GVALGTVVGGTSSFTSF*AGISDLATFGTAAGGTLSGLDCTGSL PSSAAACAVLSSTALPPS*IG Subject 4764 RVVTLGAGFSSTSGVALGTVVGGTSSFTSF*AGISDLATFGTAAGGTLSGLDCTGSLMPSSAAACAVLSSTALPPS*IG 5000
Range 5: 3704 to 3877 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.4 bits(274) | 0.0 | 56/58(97%) | 0/58(0%) | Plus/Minus |
Query 1124 TSLEFRNYCPRTF*R*PQFRAYTSMQLGPHPKTPRISR*APYSAIRK**SHLRKLHSK 1297 TSLEFRNY PRTF*R*PQFRAYTSMQLGPHPKTPRISR*APYSAIRK *SHLRKLHSK Subject 3704 TSLEFRNYRPRTF*R*PQFRAYTSMQLGPHPKTPRISR*APYSAIRKW*SHLRKLHSK 3877
Range 6: 3998 to 4312 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
251.7 bits(543) | 0.0 | 104/105(99%) | 0/105(0%) | Minus/Plus |
Query 689 NVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*GVCLTTPYLNLLTSH 1003 NVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*G CLTTPYLNLLTSH Subject 3998 NVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*GACLTTPYLNLLTSH 4312
Range 7: 4352 to 4615 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
202.7 bits(436) | 0.0 | 85/88(97%) | 0/88(0%) | Minus/Plus |
Query 386 ITGTLTMTKVLVHLGLSMKRFPVTIVMDPLLVSQAMMVSQMCATWGLTPTGKLLVKKRPIHLEACNTLTSRKRLPRLQLWRKDKVIRR 649 ITGTLTMTKVLVHLGLSMKRFPVTI MDPLLVSQAMMVSQMCATWGL PTGKLLVKKRPIHLEACNTL SRKRLPRLQLWRKDKVIRR Subject 4352 ITGTLTMTKVLVHLGLSMKRFPVTIAMDPLLVSQAMMVSQMCATWGLAPTGKLLVKKRPIHLEACNTLMSRKRLPRLQLWRKDKVIRR 4615
Range 8: 3704 to 3961 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
201.3 bits(433) | 0.0 | 85/86(99%) | 0/86(0%) | Minus/Plus |
Query 1040 FGVKFP*MTSSLSYCGIRCLSGYSWRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGF 1297 FGVKFP*MTS LSYCGIRCLSGYSWRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGF Subject 3704 FGVKFP*MTSPLSYCGIRCLSGYSWRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGF 3961
Range 9: 4667 to 4909 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
190.8 bits(410) | 0.0 | 79/81(98%) | 0/81(0%) | Minus/Plus |
Query 92 STMSFTNSLVGKRLVRLRWTTRGCFQKATSVMRRFKKGGEL*MTTQHKPQPTKATGNQYSPVLRVYHQQLFQKSPSPKYLL 334 STMSFTNSLVGKRLVRLRWTTRGCFQKATSVM RFKKGGEL*MTTQHKPQPTKA+GNQYSPVLRVYHQQLFQKSPSPKYLL Subject 4667 STMSFTNSLVGKRLVRLRWTTRGCFQKATSVMCRFKKGGEL*MTTQHKPQPTKASGNQYSPVLRVYHQQLFQKSPSPKYLL 4909
Range 10: 4887 to 5000 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
97.3 bits(206) | 0.0 | 38/38(100%) | 0/38(0%) | Minus/Plus |
Query 1 RQVRNTCSERSETRSAADDRSERHTTCRGETRPKCYDS 114 RQVRNTCSERSETRSAADDRSERHTTCRGETRPKCYDS Subject 4887 RQVRNTCSERSETRSAADDRSERHTTCRGETRPKCYDS 5000
Range 11: 3705 to 4697 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
744.3 bits(1618) | 0.0 | 326/331(98%) | 0/331(0%) | Minus/Plus |
Query 304 LE*SFLK*LHHFRIAE*GAYRDIRGVFGCGPNCMEV*ARNCG*R*KVRGQ*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGCDRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKGFA*RHHTSTCLRPTGRGEECV**DA*VLPGL*L*RRCWSIWDSA*SGSR*R**WIHF*CLKL*WCHKCARRGD*HQRGSYW*RRDPFTSKRAIHLRRGRGCPVCSCGGKTR*SVGFWYR*RYGFXXXXXXXXXXCLSPTV*W 1296 LE*SFLK*LHHFRIAE*GAYRDIRGVFGCGPNCMEV*ARNCG*R*KVRG+*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGCDRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKG A*RHHTSTCLRPTGRGEECV *DA*VLPGL*L*RRCWSIWDSA*SGSR*R* WIHF*CLKL*WCHKCARRGD*HQRGSYW*RRDPFTSKRAIHL RGRGCPVCSCGGKTR*SVGFWYR*RYGFC*KCEKRCRRCLSPTV*W Subject 3705 LE*SFLK*LHHFRIAE*GAYRDIRGVFGCGPNCMEV*ARNCG*R*KVRGR*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGCDRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKGLA*RHHTSTCLRPTGRGEECVR*DA*VLPGL*L*RRCWSIWDSA*SGSR*R*RWIHF*CLKL*WCHKCARRGD*HQRGSYW*RRDPFTSKRAIHLCRGRGCPVCSCGGKTR*SVGFWYR*RYGFC*KCEKRCRRCLSPTV*W 4697
Range 12: 4900 to 4998 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
75.6 bits(159) | 0.0 | 32/33(97%) | 0/33(0%) | Minus/Plus |
Query 3 IPAQKEVKLEVPPTTVPSATPHVEEKPAPSVTT 101 IPAQKEVKLEVPPTTVPSATP VEEKPAPSVTT Subject 4900 IPAQKEVKLEVPPTTVPSATPLVEEKPAPSVTT 4998
Range 13: 4734 to 4784 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
41.8 bits(85) | 0.0 | 17/17(100%) | 0/17(0%) | Minus/Plus |
Query 217 VASRKRHR*CADSRRGE 267 VASRKRHR*CADSRRGE Subject 4734 VASRKRHR*CADSRRGE 4784
Range 14: 3967 to 4416 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
334.7 bits(726) | 0.0 | 150/150(100%) | 0/150(0%) | Minus/Plus |
Query 585 AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMXXXXXXXXXGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVP 1034 AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMFFFGLGTLLGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVP Subject 3967 AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMFFFGLGTLLGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVP 4416
Range 15: 4471 to 4833 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
210.8 bits(455) | 0.0 | 118/121(98%) | 0/121(0%) | Minus/Plus |
Query 168 NVRDVGIXXXXXXXXXXXTHSPRSVQYTYXXXXXXXXXXXXERQGDPSGSGTADAMAFVESVKKGVDDVFHQQSSGETAREVEVDDKGLLPESDIGDAPIQEGGRAVDDNTAQAAADEGHR 530 NVRDVGI+TNGEVTGEEETHSPRSVQYTYVEEEVAPSAAVAERQGDPSGSGTADAMAFVESVKKGVDDVFHQQSSGETAREVEVDDKGLLPESDIGD PIQEGGRAVDDNTAQAAADEG R Subject 4471 NVRDVGISTNGEVTGEEETHSPRSVQYTYVEEEVAPSAAVAERQGDPSGSGTADAMAFVESVKKGVDDVFHQQSSGETAREVEVDDKGLLPESDIGDVPIQEGGRAVDDNTAQAAADEGIR 4833
Range 16: 3703 to 3852 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
117.6 bits(251) | 0.0 | 49/50(98%) | 0/50(0%) | Minus/Plus |
Query 1149 FWSEVSLNDFITFVLRNKVLIGIFVASLGAAPIAWKYRRGIAANARRYAG 1298 FWSEVSLNDF TFVLRNKVLIGIFVASLGAAPIAWKYRRGIAANARRYAG Subject 3703 FWSEVSLNDFTTFVLRNKVLIGIFVASLGAAPIAWKYRRGIAANARRYAG 3852
Range 17: 4943 to 4999 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
50.1 bits(103) | 0.0 | 18/19(95%) | 0/19(0%) | Minus/Plus |
Query 2 PFRAPHHMSRRNPPQVLRL 58 PFRAPHH+SRRNPPQVLRL Subject 4943 PFRAPHHLSRRNPPQVLRL 4999
Range 18: 3699 to 4334 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
456.5 bits(990) | 0.0 | 209/212(99%) | 0/212(0%) | Plus/Minus |
Query 667 YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVSXXXXXXXXXXXXIPRLYFHAIGAAPKDATNIPISTLFRNTKVMKSFKETSLQKS 1302 YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVS*L PAYLLALAAIPRLYFHAIGAAPKDATNIPISTLFRNTKV+KSFKETSLQ S Subject 3699 YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVS*LPPAYLLALAAIPRLYFHAIGAAPKDATNIPISTLFRNTKVVKSFKETSLQNS 4334
Range 19: 4377 to 4553 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
110.1 bits(234) | 0.0 | 59/59(100%) | 0/59(0%) | Plus/Minus |
Query 448 VYCTLRGEWXXXXXXXXXXXXIPTSRTFVTPS*LETLEVDPSLSSPGTASC*VPDGPAP 624 VYCTLRGEWVSSSPVTSPLVLIPTSRTFVTPS*LETLEVDPSLSSPGTASC*VPDGPAP Subject 4377 VYCTLRGEWVSSSPVTSPLVLIPTSRTFVTPS*LETLEVDPSLSSPGTASC*VPDGPAP 4553
Range 20: 4596 to 4709 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
94.1 bits(199) | 0.0 | 38/38(100%) | 0/38(0%) | Plus/Minus |
Query 292 RAVSPLDCW*KTSSTPFFTLSTKAIASAVPEPDGSPCL 405 RAVSPLDCW*KTSSTPFFTLSTKAIASAVPEPDGSPCL Subject 4596 RAVSPLDCW*KTSSTPFFTLSTKAIASAVPEPDGSPCL 4709
Grapevine leafroll associated virus 3 isolate 621, complete genome
Sequence ID: GQ352631.1 Length: 18498 Number of Matches: 21
Range 1: 3888 to 5183 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
969.7 bits(2110) | 0.0 | 421/432(97%) | 0/432(0%) | Plus/Minus |
Query 3 SRNTWGGFLLDMWCGARNGXXXXXXXXXXLSRYFGLGDFWNSCWWYTLRTGLYWFPVAFVGCGLCCVVIYSSPPFLNRRITDVAFWKQPLVVHLNLTSRFPTRLLVKDIVDTFFHTFNKSHSVSGTRTRRITLSFRHSCRRGNLFLDVSVLHASR*MGLFFTSNFPVGVNPHVAHICDTIIA*DTRSGSITIVTGNRFMLSPRWTSTFVIVKVPVIPKRLIIHIPPLYRWDVSKLRYGVVKQTPYDQRYP*RNRQ*Q*ADTLPSPNNLGNSAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*GRKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARXXXXXXXXXL*T*RA*SFVTTARVPSSVSRNSAPILPCNWGRTQRRHEYPDKHLIPQYESDEVI*GNFTPK 1298 SRNTWGGFLLD WCGARNGRRRHF*FHFFLSRYFGLGDFWNSCWWYTLRTGLYWFPVAFVGCGLCCVVIYSSPPFLNRRITDVAFWKQPLVVHLNLTSRFPTRLLVKDIVDTFFHTFNKSHSVSGTRTRRITLSFRHSCRRGNLFLD+SVLHASR*MGLFFTSNFPVG NPHVAHICDTIIA*DTRSGSI IVTGNRFMLSPRWTSTFVIVKVPVIPKRLI+HIPPLYRWDVSKLRYGVVKQ PYDQRYP*RNRQ*Q*ADTLPSPNNLGN APIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV* RKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARG*TA*TTGGL*T*RA*SFVTTAR PSSVSRNSAPILPCNWGRTQRRH YPDKHLIPQYES EVI*GNFTPK Subject 3888 SRNTWGGFLLDKWCGARNGRRRHF*FHFFLSRYFGLGDFWNSCWWYTLRTGLYWFPVAFVGCGLCCVVIYSSPPFLNRRITDVAFWKQPLVVHLNLTSRFPTRLLVKDIVDTFFHTFNKSHSVSGTRTRRITLSFRHSCRRGNLFLDISVLHASR*MGLFFTSNFPVGANPHVAHICDTIIA*DTRSGSIVIVTGNRFMLSPRWTSTFVIVKVPVIPKRLIVHIPPLYRWDVSKLRYGVVKQAPYDQRYP*RNRQ*Q*ADTLPSPNNLGNGAPIIGEASKLPSIRASPRPKQCP*TKEKH*VPWKSMCPNA*HTAAGNGV*SRKR*QR*GDLTFSYGRPSDGHSRRKPSSHD*RSTGYCARG*TA*TTGGL*T*RA*SFVTTARAPSSVSRNSAPILPCNWGRTQRRH*YPDKHLIPQYESGEVI*GNFTPK 5183
Range 2: 4105 to 4626 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
394.2 bits(854) | 0.0 | 168/174(97%) | 0/174(0%) | Plus/Minus |
Query 560 KWIHHYRHREPLHAESQMDQHLRHSQSPGNT*ASHHTHSSPLPVGRKQVEVWCR*ANPL*SKIPLA**AVTMS*HSSLAKQPREQRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMR*KTIATLRGLDV*LRSP**RSQPTKTLFARLKIHRILC 1081 KWIH YRHREPLHAESQMDQHLRHSQSPGNT*ASH THSSPLPVGRKQVEVWCR*A+PL*SKIPLA**AVTMS*HSSLAKQPRE+RTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRM+*KTIATLRGLDV*LRSP**R QPTKTLFARLKIHRILC Subject 4105 KWIHRYRHREPLHAESQMDQHLRHSQSPGNT*ASHRTHSSPLPVGRKQVEVWCR*ASPL*SKIPLA**AVTMS*HSSLAKQPRERRTNYWRSLQTSKYSR*PSPQAMSLNQRKTLSAVEEHVPKCLTYCSRKWRMK*KTIATLRGLDV*LRSP**RPQPTKTLFARLKIHRILC 4626
Range 3: 4669 to 4968 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
254.9 bits(550) | 0.0 | 99/100(99%) | 0/100(0%) | Plus/Minus |
Query 218 SPLLESAHHRCRFLEATPCRPPQPHEPFPH*TVGERHRRHLFSHFQQKP*RQRYQNPTDHLVFPPQLQTGQPLPRRKCIARFEVNGSLLHQ*LPRWC*SP 517 SPLLESAHHRCRFLEATPCRPPQPHEPFPH*TVGERHRRHLFSHFQQKP*RQRYQNPTDHLVFPPQLQTGQPLPR KCIARFEVNGSLLHQ*LPRWC*SP Subject 4669 SPLLESAHHRCRFLEATPCRPPQPHEPFPH*TVGERHRRHLFSHFQQKP*RQRYQNPTDHLVFPPQLQTGQPLPRHKCIARFEVNGSLLHQ*LPRWC*SP 4968
Range 4: 4946 to 5185 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
178.9 bits(384) | 0.0 | 79/80(99%) | 0/80(0%) | Plus/Minus |
Query 1 RVVTLGAGFSSTCGVALGTVVGGTSSFTSF*AGISDLATFGTAAGGTLSGLDCTGSLWPSSAAACAVLSSTALPPS*IGA 240 RVVTLGAGFSST GVALGTVVGGTSSFTSF*AGISDLATFGTAAGGTLSGLDCTGSLWPSSAAACAVLSSTALPPS*IGA Subject 4946 RVVTLGAGFSSTSGVALGTVVGGTSSFTSF*AGISDLATFGTAAGGTLSGLDCTGSLWPSSAAACAVLSSTALPPS*IGA 5185
Range 5: 3889 to 4062 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
127.1 bits(271) | 0.0 | 55/58(95%) | 0/58(0%) | Plus/Minus |
Query 1124 TSLEFRNYCPRTF*R*PQFRAYTSMQLGPHPKTPRISR*APYSAIRK**SHLRKLHSK 1297 TSLEFRNYCPRTF*R*PQFRAYTSMQLGPH KTP ISR*APYSAIRK *SHLRKLHSK Subject 3889 TSLEFRNYCPRTF*R*PQFRAYTSMQLGPHSKTPLISR*APYSAIRKW*SHLRKLHSK 4062
Range 6: 3889 to 4497 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
422.6 bits(916) | 0.0 | 195/203(96%) | 0/203(0%) | Minus/Plus |
Query 689 FGVKFP*MTSSLSYCGIRCLSGYSWRLWVRPQLHGSIGAELRLTLEGTRAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGFXXXXXXXXXXXLNVKSP*RCYRFLPHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGALFPRLFGEGRVSAHCYCLLR*GYL*S*GVCLTTPYLNLLTSH 1297 FGVKFP*MTS LSYCGIRCLSGY WRL VRPQLHGSIGAELRLTLEG RAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGFRRL PSLGRP*LNVKSP*RCYRFL HTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGA FPRLFGEGRVSAHCYCLLR*GYL*S*G CLTTPYLNLLTSH Subject 3889 FGVKFP*MTSPLSYCGIRCLSGY*WRL*VRPQLHGSIGAELRLTLEGARAVVTKL*AR*VHKPPVVYAV*PLAQYPVDL*SCEEGFRRLWPSLGRP*LNVKSP*RCYRFLLHTPFPAAVC*AFGHMLFHGT*CFSLV*GHCLGRGLARILGSLEASPIIGAPFPRLFGEGRVSAHCYCLLR*GYL*S*GACLTTPYLNLLTSH 4497
Range 7: 4537 to 4800 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
202.7 bits(436) | 0.0 | 85/88(97%) | 0/88(0%) | Minus/Plus |
Query 386 ITGTLTMTKVLVHLGLSMKRFPVTIVMDPLLVSQAMMVSQMCATWGLTPTGKLLVKKRPIHLEACNTLTSRKRLPRLQLWRKDKVIRR 649 ITGTLTMTKVLVHLGLSMKRFPVTI MDPLLVSQAMMVSQMCATWGL PTGKLLVKKRPIHLEACNTL SRKRLPRLQLWRKDKVIRR Subject 4537 ITGTLTMTKVLVHLGLSMKRFPVTITMDPLLVSQAMMVSQMCATWGLAPTGKLLVKKRPIHLEACNTLMSRKRLPRLQLWRKDKVIRR 4800
Range 8: 4852 to 5094 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
196.3 bits(422) | 0.0 | 81/81(100%) | 0/81(0%) | Minus/Plus |
Query 92 STMSFTNSLVGKRLVRLRWTTRGCFQKATSVMRRFKKGGEL*MTTQHKPQPTKATGNQYSPVLRVYHQQLFQKSPSPKYLL 334 STMSFTNSLVGKRLVRLRWTTRGCFQKATSVMRRFKKGGEL*MTTQHKPQPTKATGNQYSPVLRVYHQQLFQKSPSPKYLL Subject 4852 STMSFTNSLVGKRLVRLRWTTRGCFQKATSVMRRFKKGGEL*MTTQHKPQPTKATGNQYSPVLRVYHQQLFQKSPSPKYLL 5094
Range 9: 5072 to 5185 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
97.3 bits(206) | 0.0 | 38/38(100%) | 0/38(0%) | Minus/Plus |
Query 1 RQVRNTCSERSETRSAADDRSERHTTCRGETRPKCYDS 114 RQVRNTCSERSETRSAADDRSERHTTCRGETRPKCYDS Subject 5072 RQVRNTCSERSETRSAADDRSERHTTCRGETRPKCYDS 5185
Range 10: 3890 to 4882 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
729.2 bits(1585) | 0.0 | 322/331(97%) | 0/331(0%) | Minus/Plus |
Query 304 LE*SFLK*LHHFRIAE*GAYRDIRGVFGCGPNCMEV*ARNCG*R*KVRGQ*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGCDRH*GDRS*TSSPLSVAIVFYLIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRCSRGCLAREECQLIVTAYYARGIFDHKGFA*RHHTSTCLRPTGRGEECV**DA*VLPGL*L*RRCWSIWDSA*SGSR*R**WIHF*CLKL*WCHKCARRGD*HQRGSYW*RRDPFTSKRAIHLRRGRGCPVCSCGGKTR*SVGFWYR*RYGFXXXXXXXXXXCLSPTV*W 1296 LE*SFLK*LHHFRIAE*GAYRDI GVF CGPNCMEV*ARNCG*R*KVRGQ*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGC RH*GDRS*TSSPLSVAIVFY IRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVR SRGCLAREECQLIVTAYYARGIFDHKG A*RHHTSTCLRPTGRGEECV *DA*VLPGL*L*RRCWSIWDSA*SGSR*R* WIHF*CLKL*WCHKCARRGD*HQRGSYW*RRDPFTSKRAIHL RGRGCPVCSCGGKTR*SVGFWYR*RYGFC*KCEKRCRRCLSPTV*W Subject 3890 LE*SFLK*LHHFRIAE*GAYRDISGVFECGPNCMEV*ARNCG*R*KVRGQ*LRNSKLVKFTSRRWFTRFNL*HSIRWIFSRAKRVFVGCGRH*GDRS*TSSPLSVAIVFYFIRHFRLQYVRHLGTCSSTALNVFLWFRDIAWGEG*REYLEVWRLLQ*LVRRSRGCLAREECQLIVTAYYARGIFDHKGLA*RHHTSTCLRPTGRGEECVR*DA*VLPGL*L*RRCWSIWDSA*SGSR*R*RWIHF*CLKL*WCHKCARRGD*HQRGSYW*RRDPFTSKRAIHLCRGRGCPVCSCGGKTR*SVGFWYR*RYGFC*KCEKRCRRCLSPTV*W 4882
Range 11: 5085 to 5183 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
75.6 bits(159) | 0.0 | 32/33(97%) | 0/33(0%) | Minus/Plus |
Query 3 IPAQKEVKLEVPPTTVPSATPHVEEKPAPSVTT 101 IPAQKEVKLEVPPTTVPSATP VEEKPAPSVTT Subject 5085 IPAQKEVKLEVPPTTVPSATPLVEEKPAPSVTT 5183
Range 12: 4919 to 4969 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
41.8 bits(85) | 0.0 | 17/17(100%) | 0/17(0%) | Minus/Plus |
Query 217 VASRKRHR*CADSRRGE 267 VASRKRHR*CADSRRGE Subject 4919 VASRKRHR*CADSRRGE 4969
Range 13: 4152 to 4601 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
332.4 bits(721) | 0.0 | 149/150(99%) | 0/150(0%) | Minus/Plus |
Query 585 AVTVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMXXXXXXXXXGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVP 1034 AV VTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMFFFGLGTLLGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVP Subject 4152 AVAVTRATVAKRQVPLALLSFSTSYAISGCSMLGIWAHALPRHLMFFFGLGTLLGARASANTWKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLAYVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVP 4601
Range 14: 4656 to 5018 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
217.7 bits(470) | 0.0 | 120/121(99%) | 0/121(0%) | Minus/Plus |
Query 168 NVRDVGIXXXXXXXXXXXTHSPRSVQYTYXXXXXXXXXXXXERQGDPSGSGTADAMAFVESVKKGVDDVFHQQSSGETAREVEVDDKGLLPESDIGDAPIQEGGRAVDDNTAQAAADEGHR 530 NVRDVGI+TNGEVTGEEETHSPRSVQYTYVEEEVAPSAAVAERQGDPSGSGTADAMAFVESVKKGVDDVFHQQSSGETAREVEVDDKGLLPESDIGDAPIQEGGRAVDDNTAQAAADEGHR Subject 4656 NVRDVGISTNGEVTGEEETHSPRSVQYTYVEEEVAPSAAVAERQGDPSGSGTADAMAFVESVKKGVDDVFHQQSSGETAREVEVDDKGLLPESDIGDAPIQEGGRAVDDNTAQAAADEGHR 5018
Range 15: 3888 to 4037 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
108.0 bits(230) | 0.0 | 46/50(92%) | 0/50(0%) | Minus/Plus |
Query 1149 FWSEVSLNDFITFVLRNKVLIGIFVASLGAAPIAWKYRRGIAANARRYAG 1298 FWSEVSLNDF TFVLRNKVLIGI VASL AAPIAWKYRRGIAANARR AG Subject 3888 FWSEVSLNDFTTFVLRNKVLIGILVASLSAAPIAWKYRRGIAANARRCAG 4037
Range 16: 5128 to 5184 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
50.1 bits(103) | 0.0 | 18/19(95%) | 0/19(0%) | Minus/Plus |
Query 2 PFRAPHHMSRRNPPQVLRL 58 PFRAPHH+SRRNPPQVLRL Subject 5128 PFRAPHHLSRRNPPQVLRL 5184
Range 17: 3884 to 4519 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
450.1 bits(976) | 0.0 | 207/212(98%) | 0/212(0%) | Plus/Minus |
Query 667 YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTVTADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVSXXXXXXXXXXXXIPRLYFHAIGAAPKDATNIPISTLFRNTKVMKSFKETSLQKS 1302 YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVT TADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVS*LLPA+LLALAAIPRLYFHAIGAA KDATNIPISTLFRNTKV+KSFKETSLQ S Subject 3884 YTFLPSTGGT*AS*GMVSLSKPLMIKDTPSVIGSNNELTLFPRQTTSGTAHQLLEKPPNFQVFALALAPSNVPKPKKNIKCRGRACAQMPNILQPEMAYEVENDSNAKGT*RLATVALVTATADENPLRTTKDPPDTVLEVKPRKPPAACELNELRVS*LLPAHLLALAAIPRLYFHAIGAALKDATNIPISTLFRNTKVVKSFKETSLQNS 4519
Range 18: 4562 to 4738 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
110.1 bits(234) | 0.0 | 59/59(100%) | 0/59(0%) | Plus/Minus |
Query 448 VYCTLRGEWXXXXXXXXXXXXIPTSRTFVTPS*LETLEVDPSLSSPGTASC*VPDGPAP 624 VYCTLRGEWVSSSPVTSPLVLIPTSRTFVTPS*LETLEVDPSLSSPGTASC*VPDGPAP Subject 4562 VYCTLRGEWVSSSPVTSPLVLIPTSRTFVTPS*LETLEVDPSLSSPGTASC*VPDGPAP 4738
Range 19: 4781 to 4894 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
94.1 bits(199) | 0.0 | 38/38(100%) | 0/38(0%) | Plus/Minus |
Query 292 RAVSPLDCW*KTSSTPFFTLSTKAIASAVPEPDGSPCL 405 RAVSPLDCW*KTSSTPFFTLSTKAIASAVPEPDGSPCL Subject 4781 RAVSPLDCW*KTSSTPFFTLSTKAIASAVPEPDGSPCL 4894
Nucleotide Sequence (501 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
380.5 | 2158.8 | 29% | 8.381e-104 | 97% | KM058745.1 | |
316.8 | 790.4 | 44% | 1.248e-84 | 37% | JX266782.1 | |
319.5 | 828.6 | 23% | 1.856e-85 | 37% | JQ796828.1 | |
309.0 | 646.1 | 31% | 2.786e-82 | 39% | JQ655295.1 | |
309.0 | 650.2 | 31% | 2.786e-82 | 40% | JQ655296.1 |
Alignments
Grapevine leafroll associated virus 3 isolate GH24, complete genome
Sequence ID: KM058745.1 Length: 18493 Number of Matches: 10
Range 1: 2532 to 3005 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
380.5 bits(824) | 0.0 | 158/158(100%) | 0/158(0%) | Minus/Plus |
Query 1 VLQVAEAMDKKGCLAFDIALMFPIELLYGNGEVYLEDVDTLVVREGDALTYNVGMCGEVYVHSFANVSGFFTNAYVRASSRNVYKLEYEGCRCGYHHFTMCRAQKLQSAEVTQRSIVPTFLGKSIVFLPVVDGTKVCFKSLVLDSDFVDRIYSYALNT 474 VLQVAEAMDKKGCLAFDIALMFPIELLYGNGEVYLEDVDTLVVREGDALTYNVGMCGEVYVHSFANVSGFFTNAYVRASSRNVYKLEYEGCRCGYHHFTMCRAQKLQSAEVTQRSIVPTFLGKSIVFLPVVDGTKVCFKSLVLDSDFVDRIYSYALNT Subject 2532 VLQVAEAMDKKGCLAFDIALMFPIELLYGNGEVYLEDVDTLVVREGDALTYNVGMCGEVYVHSFANVSGFFTNAYVRASSRNVYKLEYEGCRCGYHHFTMCRAQKLQSAEVTQRSIVPTFLGKSIVFLPVVDGTKVCFKSLVLDSDFVDRIYSYALNT 3005
Range 2: 2528 to 3004 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
366.7 bits(794) | 0.0 | 158/159(99%) | 0/159(0%) | Plus/Minus |
Query 2 VLRA*E*ILSTKSESRTKDLKHTLVPSTTGKNTIDLPRNVGTMDLCVTSALCNF*ALHIVK*WYPHRQPSYSSLYTFLEEART*ALVKKPLTLAKEWT*TSPHMPTL*VNASPSRTTNVSTSSRYTSPFPYNNSIGNMRAISKARHPFLSIASATCNTN 478 VLRA*E*ILSTKSESRTKDLKHTLVPSTTGKNTIDLPRNVGTMDLCVTSALCNF*ALHIVK*WYPHRQPSYSSLYTFLEEART*ALVKKPLTLAKEWT*TSPHMPTL*VNASPSRTTNVSTSSRYTSPFPYNNSIGNMRAISKARHPFLSIASATCNT+ Subject 2528 VLRA*E*ILSTKSESRTKDLKHTLVPSTTGKNTIDLPRNVGTMDLCVTSALCNF*ALHIVK*WYPHRQPSYSSLYTFLEEART*ALVKKPLTLAKEWT*TSPHMPTL*VNASPSRTTNVSTSSRYTSPFPYNNSIGNMRAISKARHPFLSIASATCNTD 3004
Range 3: 2509 to 2529 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
22.1 bits(42) | 0.0 | 7/7(100%) | 0/7(0%) | Plus/Minus |
Query 480 TYRRHQP 500 TYRRHQP Subject 2509 TYRRHQP 2529
Range 4: 2532 to 3002 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
366.7 bits(794) | 0.0 | 156/157(99%) | 0/157(0%) | Plus/Minus |
Query 4 VEGVRIDSVNKIRIQNQRLKAHLGPINNRQKHDRFTKKRGDNGPLRNLRALQLLSSAHREVMVPTPATLVLQLIHISRRSTDVGVGKEAAYVGEGMDINFSAHANIVS*RIPFPNYQRVDVL*VHLPISIQQFDREHEGYIKGQTPLLIHSLGDLQY 474 VEGVRIDSVN+IRIQNQRLKAHLGPINNRQKHDRFTKKRGDNGPLRNLRALQLLSSAHREVMVPTPATLVLQLIHISRRSTDVGVGKEAAYVGEGMDINFSAHANIVS*RIPFPNYQRVDVL*VHLPISIQQFDREHEGYIKGQTPLLIHSLGDLQY Subject 2532 VEGVRIDSVNEIRIQNQRLKAHLGPINNRQKHDRFTKKRGDNGPLRNLRALQLLSSAHREVMVPTPATLVLQLIHISRRSTDVGVGKEAAYVGEGMDINFSAHANIVS*RIPFPNYQRVDVL*VHLPISIQQFDREHEGYIKGQTPLLIHSLGDLQY 3002
Range 5: 2758 to 3003 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
207.7 bits(447) | 0.0 | 81/82(99%) | 0/82(0%) | Plus/Minus |
Query 3 C*GRKNRFCQQNPNPEPKT*STPWSHQQQAKTR*IYQETWGQWTFA*PPRSATFELCTS*SDGTHTGNPRTPAYTHF*KKHG 248 C*GRKNRFCQ+NPNPEPKT*STPWSHQQQAKTR*IYQETWGQWTFA*PPRSATFELCTS*SDGTHTGNPRTPAYTHF*KKHG Subject 2758 C*GRKNRFCQRNPNPEPKT*STPWSHQQQAKTR*IYQETWGQWTFA*PPRSATFELCTS*SDGTHTGNPRTPAYTHF*KKHG 3003
Range 6: 2530 to 2718 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
164.2 bits(352) | 0.0 | 63/63(100%) | 0/63(0%) | Plus/Minus |
Query 288 NGHKLLRTCQHCKLTHPLPELPTCRRPLGTPPHFHTTIRSGT*GLYQRPDTPSYP*PRRLAIR 476 NGHKLLRTCQHCKLTHPLPELPTCRRPLGTPPHFHTTIRSGT*GLYQRPDTPSYP*PRRLAIR Subject 2530 NGHKLLRTCQHCKLTHPLPELPTCRRPLGTPPHFHTTIRSGT*GLYQRPDTPSYP*PRRLAIR 2718
Range 7: 2761 to 3003 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.9 bits(419) | 0.0 | 80/81(99%) | 0/81(0%) | Minus/Plus |
Query 3 VLLLEMCISWSTRVAGVGTITSRCAELKSCRARRLRKGPLSPRFLVNLSCFCLLLMGPRCALSLWFWIRILLTESILTPST 245 VLLLEMCISWSTRVAGVGTITSRCAELKSCRARRLRKGPLSPRFLVNLSCFCLLLMGPRCALSLWFWIRI LTESILTPST Subject 2761 VLLLEMCISWSTRVAGVGTITSRCAELKSCRARRLRKGPLSPRFLVNLSCFCLLLMGPRCALSLWFWIRISLTESILTPST 3003
Range 8: 2533 to 2718 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
156.4 bits(335) | 0.0 | 62/62(100%) | 0/62(0%) | Minus/Plus |
Query 288 YCKSPRLWIRRGVWPLI*PSCSRSNCCMEMGRCT*RTSTRW*FGKGMR*LTMLACAEKFMSI 473 YCKSPRLWIRRGVWPLI*PSCSRSNCCMEMGRCT*RTSTRW*FGKGMR*LTMLACAEKFMSI Subject 2533 YCKSPRLWIRRGVWPLI*PSCSRSNCCMEMGRCT*RTSTRW*FGKGMR*LTMLACAEKFMSI 2718
Range 9: 2672 to 3004 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
220.1 bits(474) | 0.0 | 110/111(99%) | 0/111(0%) | Minus/Plus |
Query 2 CVNLQCWHVRRSLCPFXXXXXXXXXXXXRPCFF*KCV*AGVRGLPVWVPSLHDVQSSKVAERGGYAKVHCPHVSW*IYRVFACC*WDQGVL*VXXXXXXFC*QNLFLRPQH 334 CVNLQCWHVRRSLCPFLRQRKRLLYQRLRPCFF*KCV*AGVRGLPVWVPSLHDVQSSKVAERGGYAKVHCPHVSW*IYRVFACC*WDQGVL*VFGSGFGF *QNLFLRPQH Subject 2672 CVNLQCWHVRRSLCPFLRQRKRLLYQRLRPCFF*KCV*AGVRGLPVWVPSLHDVQSSKVAERGGYAKVHCPHVSW*IYRVFACC*WDQGVL*VFGSGFGFR*QNLFLRPQH 3004
Grapevine leafroll associated virus 3m isolate 139, complete genome
Sequence ID: JX266782.1 Length: 18475 Number of Matches: 6
Range 1: 2311 to 2778 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
316.8 bits(685) | 0.0 | 127/156(81%) | 0/156(0%) | Minus/Plus |
Query 1 QVAEAMDKKGCLAFDIALMFPIELLYGNGEVYLEDVDTLVVREGDALTYNVGMCGEVYVHSFANVSGFFTNAYVRASSRNVYKLEYEGCRCGYHHFTMCRAQKLQSAEVTQRSIVPTFLGKSIVFLPVVDGTKVCFKSLVLDSDFVDRIYSYALNT 468 QVAEAMD+KGCLAFD+ALMFP+ELLYGNGEV LE++DTLV REGD + Y+VG CGEVY HSF +VSGFFTNAYVR SS +VYK+EYEG RCGYHHFTMCRAQKLQ EVT+RS+VPTF GKS+VFLP+VDGTKV FKS+VLDSDFVDRIYSYALNT Subject 2311 QVAEAMDRKGCLAFDVALMFPVELLYGNGEVLLEELDTLVRREGDRIFYSVGQCGEVYEHSFTDVSGFFTNAYVRVSSGSVYKVEYEGYRCGYHHFTMCRAQKLQDVEVTRRSLVPTFAGKSVVFLPIVDGTKVNFKSIVLDSDFVDRIYSYALNT 2778
Range 2: 2301 to 2777 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
222.8 bits(480) | 0.0 | 107/159(67%) | 0/159(0%) | Plus/Minus |
Query 2 VLRA*E*ILSTKSESRTKDLKHTLVPSTTGKNTIDLPRNVGTMDLCVTSALCNF*ALHIVK*WYPHRQPSYSSLYTFLEEART*ALVKKPLTLAKEWT*TSPHMPTL*VNASPSRTTNVSTSSRYTSPFPYNNSIGNMRAISKARHPFLSIASATCNTN 478 VL A*E*ILSTKSES T DLK T VPST GK T DLP VGT DL VTS C+F ALHIVK PH PSYS+L T E+ RT*A VK PLT KE +*TSPH PTL* SPSR T VS+SS+ TSPFPY +S GN+RA SKA+ PFLSIASATC+ + Subject 2301 VLSA*E*ILSTKSESNTIDLKFTFVPSTIGKKTTDLPAKVGTNDLRVTSTSCSFWALHIVKW**PHLYPSYSTL*TLPEDTRT*AFVKNPLTSVKECS*TSPHWPTL*NMRSPSRLTKVSSSSKRTSPFPYKSSTGNIRATSKAKQPFLSIASATCHAD 2777
Range 3: 2311 to 2775 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
122.5 bits(261) | 0.0 | 60/155(39%) | 0/155(0%) | Plus/Minus |
Query 4 VEGVRIDSVNKIRIQNQRLKAHLGPINNRQKHDRFTKKRGDNGPLRNLRALQLLSSAHREVMVPTPATLVLQLIHISRRSTDVGVGKEAAYVGEGMDINFSAHANIVS*RIPFPNYQRVDVL*VHLPISIQQFDREHEGYIKGQTPLLIHSLGDL 468 V+ V I+ +++IRIQ RLK + P++ RQ+ K G+ P R+ LQLL H +V++ P +L LI+ R T V + KE +V EGM INF+ A+ + I F +Q V L* +L +S+Q+F+REH+G I+ L IH L +L Subject 2311 VKCVGINPIDEIRIQYDRLKIYFRPVDYRQEDHGLASKGGN*RPARHFNVLQLLGPTHSKVVIAAPIPFILHLINTPRGHTYVSIRKEPTHVCEGMFINFTTLADAIKYAITFAPHQSVKFL*KNLTVSVQEFNREHKGNIES*ATLSIHRLCNL 2775
Range 4: 2555 to 2743 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.5 bits(82) | 0.0 | 23/63(37%) | 0/63(0%) | Minus/Plus |
Query 36 ISWSTRVAGVGTITSRCAELKSCRARRLRKGPLSPRFLVNLSCFCLLLMGPRCALSLWFWIRI 224 I WS + G T C KSCR + R G P L + CL G + LSL +WI I Subject 2555 IRWSMKGIGAAITTLLCVGPKSCRTLK*RAGR*FPPLLASPWSSCL*STGRK*ILSLSYWILI 2743
Range 5: 2321 to 2491 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
37.7 bits(76) | 0.0 | 23/57(40%) | 0/57(0%) | Minus/Plus |
Query 288 RLWIRRGVWPLI*PSCSRSNCCMEMGRCT*RTSTRW*FGKGMR*LTMLACAEKFMSI 458 R WI R + P CSR N C E R *R T W* K + A KFM+I Subject 2321 RRWIERVA*LSMLPLCSRLNSCTETVRFF*RNLTLW*GAKVIAYFIASASVVKFMNI 2491
Range 6: 2303 to 2491 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
50.1 bits(103) | 0.0 | 24/63(38%) | 0/63(0%) | Plus/Minus |
Query 288 NGHKLLRTCQHCKLTHPLPELPTCRRPLGTPPHFHTTIRSGT*GLYQRPDTPSYP*PRRLAIR 476 N HKL T + K+ L P C+ PL P F T ++ GT*G +++ P YP P + A R Subject 2303 NVHKLHHTGRRYKICDHLRASPKCQVPLKEPHRFRTRVQPGT*GQHRKLSNPFYPSPLQPATR 2491
Grapevine leafroll associated virus 3 clone 3, complete genome
Sequence ID: JQ796828.1 Length: 18552 Number of Matches: 7
Range 1: 2538 to 3005 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
319.5 bits(691) | 0.0 | 126/156(81%) | 0/156(0%) | Minus/Plus |
Query 1 QVAEAMDKKGCLAFDIALMFPIELLYGNGEVYLEDVDTLVVREGDALTYNVGMCGEVYVHSFANVSGFFTNAYVRASSRNVYKLEYEGCRCGYHHFTMCRAQKLQSAEVTQRSIVPTFLGKSIVFLPVVDGTKVCFKSLVLDSDFVDRIYSYALNT 468 QVAEAMD+KGCL FD+ALMFPIELLYGNGEVYLE++DTLV REG+ LTYNVG CGEVY HSFA VSGFFTNAY+R SS YKLEYEG RCGYHHFTMCRAQK Q +E+TQRS+VPTF+GKS+VFLP+V+GT V FKS+VLDSDFVDR+YSYALNT Subject 2538 QVAEAMDRKGCLVFDLALMFPIELLYGNGEVYLEELDTLVKREGERLTYNVGQCGEVYEHSFAKVSGFFTNAYIRVSSGAAYKLEYEGYRCGYHHFTMCRAQKAQGSEITQRSLVPTFVGKSVVFLPIVEGTNVSFKSIVLDSDFVDRVYSYALNT 3005
Range 2: 2537 to 3004 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
221.5 bits(477) | 0.0 | 110/156(71%) | 0/156(0%) | Plus/Minus |
Query 2 VLRA*E*ILSTKSESRTKDLKHTLVPSTTGKNTIDLPRNVGTMDLCVTSALCNF*ALHIVK*WYPHRQPSYSSLYTFLEEART*ALVKKPLTLAKEWT*TSPHMPTL*VNASPSRTTNVSTSSRYTSPFPYNNSIGNMRAISKARHPFLSIASATC 469 VLRA*E* LSTKSESRT DLK TLVPST GK T DLP NVGT DL V S C F ALHIVK PH PSYSSLY EE R A VKKPLTLAKE +*TSPH PTL V SPS T VS+SS+ TSPFPY +SIGN+RA SK +HP SIASATC Subject 2537 VLRA*E*TLSTKSESRTIDLKLTLVPSTIGKKTTDLPTNVGTKDL*VISDPCAFWALHIVKW**PHL*PSYSSLYAAPEETRMYAFVKKPLTLAKECS*TSPH*PTLYVRRSPSLFTKVSSSSK*TSPFPYRSSIGNIRARSKTKHPLRSIASATC 3004
Range 3: 2538 to 3002 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
140.4 bits(300) | 0.0 | 62/155(40%) | 0/155(0%) | Plus/Minus |
Query 4 VEGVRIDSVNKIRIQNQRLKAHLGPINNRQKHDRFTKKRGDNGPLRNLRALQLLSSAHREVMVPTPATLVLQLIHISRRSTDVGVGKEAAYVGEGMDINFSAHANIVS*RIPFPNYQRVDVL*VHLPISIQQFDREHEGYIKGQTPLLIHSLGDL 468 ++G+ I+ +N++RI + R KA +GP+ N Q++ R T +R D PL + R+L+LL HREV++ P T +LQ I +RR DV + KE A+ G+GM INF ++ FP + + +L V L I IQ+F+ EH+ ++ QTPL IH +L Subject 2538 IKGIGINPINEVRI*DDRFKADVGPLYNWQENHRLTYERWDQRPLSDFRSLRLLGPTHREVVITAPITFILQFICSARRDADVCIRKETAHFGKGMFINFPTLTYVIRQTFTFPLH*SI*LLQVDLAIPIQKFNWEHKS*VENQTPLTIHRFSNL 3002
Range 4: 2759 to 2998 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.0 bits(81) | 0.0 | 31/80(39%) | 0/80(0%) | Minus/Plus |
Query 8 PCFF*KCV*AGVRGLPVWVPSLHDVQSSKVAERGGYAKVHCPHVSW*IYRVFACC*WDQGVL*VXXXXXXFC*QNLFLRP 247 P F +C+* GV L V + LHDV + A G +++V P+V *+ A C DQ L*+ FG * LFL P Subject 2759 PRLFWRCI*TGV*RL*VRLSPLHDV*GPEGARIGNHSEVFGPNVRR*VGGFLANCRGDQRQL*IDRPRFGLR**GLFLCP 2998
Range 5: 2554 to 2643 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
35.4 bits(71) | 0.0 | 16/30(53%) | 0/30(0%) | Minus/Plus |
Query 363 WIRRGVWPLI*PSCSRSNCCMEMGRCT*RT 452 WI RGVW * CS+ N CM M R T R+ Subject 2554 WIVRGVWFST*LLCSQLNFCMGMARSTWRS 2643
Range 6: 2758 to 3000 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
39.6 bits(80) | 0.0 | 30/81(37%) | 0/81(0%) | Plus/Minus |
Query 6 *GRKNRFCQQNPNPEPKT*STPWSHQQQAKTR*IYQETWGQWTFA*PPRSATFELCTS*SDGTHTGNPRTPAYTHF*KKHG 248 *G +N+ Q++PN *S WS Q A+ Y T G T * P A TS*S T N TP Y K+ G Subject 2758 *GHRNKPYQRSPNLGRSI*S*RWSPLQLARKPPTYLRTLGPKTSE*FPILAPSGPYTS*SGDNRTYNLHTPVYMQRQKRRG 3000
Grapevine leafroll associated virus 3 isolate GH11, complete genome
Sequence ID: JQ655295.1 Length: 18671 Number of Matches: 3
Range 1: 2538 to 3005 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
309.0 bits(668) | 0.0 | 123/156(79%) | 0/156(0%) | Minus/Plus |
Query 1 QVAEAMDKKGCLAFDIALMFPIELLYGNGEVYLEDVDTLVVREGDALTYNVGMCGEVYVHSFANVSGFFTNAYVRASSRNVYKLEYEGCRCGYHHFTMCRAQKLQSAEVTQRSIVPTFLGKSIVFLPVVDGTKVCFKSLVLDSDFVDRIYSYALNT 468 QVAEAMD KGCL FD+ALMFPIELLYGNGEV LE++DTLV REG+ LTYNVG CGEVY HS+ VSGFFTNAY+R SS YKLEYEG RCGYHHFTMCRAQK Q +E TQRS+VPTF+GKS+VFLP+V+GT V FKS+VLDSDFVDR+YSYALNT Subject 2538 QVAEAMDLKGCLVFDLALMFPIELLYGNGEVCLEELDTLVKREGERLTYNVGQCGEVYEHSYTKVSGFFTNAYIRVSSGAAYKLEYEGYRCGYHHFTMCRAQKAQGSETTQRSLVPTFVGKSVVFLPIVEGTSVSFKSIVLDSDFVDRVYSYALNT 3005
Range 2: 2537 to 3004 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
216.0 bits(465) | 0.0 | 106/156(68%) | 0/156(0%) | Plus/Minus |
Query 2 VLRA*E*ILSTKSESRTKDLKHTLVPSTTGKNTIDLPRNVGTMDLCVTSALCNF*ALHIVK*WYPHRQPSYSSLYTFLEEART*ALVKKPLTLAKEWT*TSPHMPTL*VNASPSRTTNVSTSSRYTSPFPYNNSIGNMRAISKARHPFLSIASATC 469 VLRA E* LSTKSESRT DLK TLVPST GK T DLP NVGT DL V S C F ALHIVK PH PSYSSLY +E R A VKKPLTL E +*TSPH PTL V SPS T VS+SS+ TSPFPY +SIGN+RA SK +HP SIASATC Subject 2537 VLRAYE*TLSTKSESRTIDLKLTLVPSTIGKKTTDLPTNVGTKDLWVVSDPCAFWALHIVKW**PHL*PSYSSLYAAPDETRMYAFVKKPLTLV*ECS*TSPHWPTLYVRRSPSLFTKVSSSSKQTSPFPYRSSIGNIRAKSKTKHPLRSIASATC 3004
Range 3: 2538 to 3005 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
121.1 bits(258) | 0.0 | 61/156(39%) | 0/156(0%) | Plus/Minus |
Query 1 CVEGVRIDSVNKIRIQNQRLKAHLGPINNRQKHDRFTKKRGDNGPLRNLRALQLLSSAHREVMVPTPATLVLQLIHISRRSTDVGVGKEAAYVGEGMDINFSAHANIVS*RIPFPNYQRVDVL*VHLPISIQQFDREHEGYIKGQTPLLIHSLGDL 468 CVE +RI+ ++KIRI + R KA P+NN ++ R T +R D PL R+L+LL AH E+++ T VL I +R DV V KE + G GM ++F A+++ FP + + +L L I IQ+F+ EH+ I+ QTPL IH +L Subject 2538 CVESIRINPIDKIRI*DDRFKADASPLNNW*ENHRLTYERWDQRPLGCFRSLRLLGPAHCEMVITASITFVL*FICRTR*DADVCVRKETTHFGIGMFVDFPTLAHVIRQTFTFPLH*SI*LLQTDLAIPIQKFNWEHKS*IENQTPLKIHRFSNL 3005
Grapevine leafroll associated virus 3 isolate GH30, complete genome
Sequence ID: JQ655296.1 Length: 18576 Number of Matches: 3
Range 1: 2443 to 2910 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
309.0 bits(668) | 0.0 | 123/156(79%) | 0/156(0%) | Minus/Plus |
Query 1 QVAEAMDKKGCLAFDIALMFPIELLYGNGEVYLEDVDTLVVREGDALTYNVGMCGEVYVHSFANVSGFFTNAYVRASSRNVYKLEYEGCRCGYHHFTMCRAQKLQSAEVTQRSIVPTFLGKSIVFLPVVDGTKVCFKSLVLDSDFVDRIYSYALNT 468 QVAEAMD KGCL FD+ALMFPIELLYGNGEV LE++DTLV REG+ LTYNVG CGEVY HS+ VSGFFTNAY+R SS YKLEYEG RCGYHHFTMCRAQK Q +E TQRS+VPTF+GKS+VFLP+V+GT V FKS+VLDSDFVDR+YSYALNT Subject 2443 QVAEAMDLKGCLVFDLALMFPIELLYGNGEVCLEELDTLVKREGERLTYNVGQCGEVYEHSYTKVSGFFTNAYIRVSSGAAYKLEYEGYRCGYHHFTMCRAQKAQGSETTQRSLVPTFVGKSVVFLPIVEGTSVSFKSIVLDSDFVDRVYSYALNT 2910
Range 2: 2442 to 2909 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
216.0 bits(465) | 0.0 | 106/156(68%) | 0/156(0%) | Plus/Minus |
Query 2 VLRA*E*ILSTKSESRTKDLKHTLVPSTTGKNTIDLPRNVGTMDLCVTSALCNF*ALHIVK*WYPHRQPSYSSLYTFLEEART*ALVKKPLTLAKEWT*TSPHMPTL*VNASPSRTTNVSTSSRYTSPFPYNNSIGNMRAISKARHPFLSIASATC 469 VLRA E* LSTKSESRT DLK TLVPST GK T DLP NVGT DL V S C F ALHIVK PH PSYSSLY +E R A VKKPLTL E +*TSPH PTL V SPS T VS+SS+ TSPFPY +SIGN+RA SK +HP SIASATC Subject 2442 VLRAYE*TLSTKSESRTIDLKLTLVPSTIGKKTTDLPTNVGTKDLWVVSDPCAFWALHIVKW**PHL*PSYSSLYAAPDETRMYAFVKKPLTLV*ECS*TSPHWPTLYVRRSPSLFTKVSSSSKQTSPFPYRSSIGNIRAKSKTKHPLRSIASATC 2909
Range 3: 2443 to 2910 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
125.2 bits(267) | 0.0 | 62/156(40%) | 0/156(0%) | Plus/Minus |
Query 1 CVEGVRIDSVNKIRIQNQRLKAHLGPINNRQKHDRFTKKRGDNGPLRNLRALQLLSSAHREVMVPTPATLVLQLIHISRRSTDVGVGKEAAYVGEGMDINFSAHANIVS*RIPFPNYQRVDVL*VHLPISIQQFDREHEGYIKGQTPLLIHSLGDL 468 CVE +RI+ ++KIRI + R KA P+NN ++ R T +R D PL R+L+LL AH E+++ T VLQ I +R DV V KE + G GM ++F A+++ FP + + +L L I IQ+F+ EH+ I+ QTPL IH +L Subject 2443 CVESIRINPIDKIRI*DDRFKADASPLNNW*ENHRLTYERWDQRPLGCFRSLRLLGPAHCEMVITASITFVLQFICRTR*DADVCVRKETTHFGIGMFVDFPTLAHVIRQTFTFPLH*SI*LLQTDLAIPIQKFNWEHKS*IENQTPLKIHRFSNL 2910