Queries
Nucleotide Sequence (304 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
113.8 | 194.6 | 46% | 6.899e-24 | 50% | HM004067.2 | |
112.4 | 172.6 | 31% | 1.789e-23 | 43% | KX882984.1 | |
111.5 | 169.4 | 32% | 3.376e-23 | 42% | GQ290650.1 | |
112.9 | 168.9 | 31% | 1.302e-23 | 40% | AF297176.1 | |
112.9 | 168.9 | 31% | 1.302e-23 | 40% | NC_005978.1 |
Alignments
Verticillium dahliae chrysovirus 1 segment 1, complete sequence
Sequence ID: HM004067.2 Length: 3594 Number of Matches: 2
Range 1: 842 to 1144 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
113.8 bits(242) | 0.0 | 51/101(50%) | 0/101(0%) | Plus/Minus |
Query 2 DVDEAFTDGADPLRVLHIMNGIGFDAKMIKQMIAGKSEFFRVTITEEGTFASVTRGLASFCAGDWETSGRTTIREKVQSTLDQVSKLVRRGLDHEIGNILI 304 D+D A + + + IM+ + F+A KQM + ++EFFR TIT +AS TR LASFCAGDWE SG T+ E+V + LDQV KL RRGLD E GN L+ Subject 842 DIDSALDNAPAMGKFMAIMDNMLFNANAWKQMFSTRTEFFRNTITSGRAYASPTRALASFCAGDWEGSGNMTMGERVINILDQVGKLTRRGLDQEFGNGLV 1144
Range 2: 852 to 1082 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
80.8 bits(170) | 0.0 | 43/77(56%) | 0/77(0%) | Minus/Plus |
Query 64 FPISWSNPLLTSLDT*SSVDCTFSLIVVLPDVSQSPAQKLASPLVTLANVPSSVIVTLKNSLLPAIICLIIFASKPI 294 FP SWS+PLL + T*SS+ T S IV+LP+ SQSPAQKLA LV LA VIV LKNS+ IC FA I Subject 852 FPNSWSSPLLVNFPT*SSMLMTRSPIVMLPEPSQSPAQKLAKALVGLAYARPEVIVFLKNSVRVLNICFHAFALNSI 1082
Wuhan insect virus 30 strain WHZM9752 hypothetical protein gene, complete cds
Sequence ID: KX882984.1 Length: 3414 Number of Matches: 2
Range 1: 2339 to 2632 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.4 bits(239) | 0.0 | 51/98(52%) | 0/98(0%) | Plus/Plus |
Query 2 DVDEAFTDGADPLRVLHIMNGIGFDAKMIKQMIAGKSEFFRVTITEEGTFASVTRGLASFCAGDWETSGRTTIREKVQSTLDQVSKLVRRGLDHEIGN 295 D+D F+DG D R L IM+ + F+A KQMI +SEFFR TI +AS TR LASF AGDWE +GR + E+V S LDQ+ KL RRG+ E N Subject 2339 DIDLMFSDGIDAQRFLRIMDSMLFNANEWKQMIGERSEFFRNTINGRVAYASPTRALASFVAGDWEGAGRAKVVERVTSLLDQIGKLERRGVSREFCN 2632
Range 2: 2338 to 2622 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
60.2 bits(125) | 0.0 | 41/95(43%) | 0/95(0%) | Minus/Minus |
Query 1 SWSNPLLTSLDT*SSVDCTFSLIVVLPDVSQSPAQKLASPLVTLANVPSSVIVTLKNSLLPAIICLIIFASKPIPFIM*STRSGSAPSVNASSTS 285 S PL ++L S D T S + LP SQSPA KLA+ V LA +IV LKNS L IIC A I +M R S PS N S S Subject 2338 SLDTPLRSNLPIWSRSDVTRSTTLALPAPSQSPATKLANARVGLA*ATLPLIVFLKNSDLSPIICFHSLALNNILSMMRKKR*ASIPSENIRSMS 2622
Cryphonectria nitschkei chrysovirus 1 from Cryphonectria nitschkei bs131 RNA dependent RNA polymerase gene, complete cds
Sequence ID: GQ290650.1 Length: 2889 Number of Matches: 2
Range 1: 2272 to 2565 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
111.5 bits(237) | 0.0 | 47/98(48%) | 0/98(0%) | Plus/Plus |
Query 2 DVDEAFTDGADPLRVLHIMNGIGFDAKMIKQMIAGKSEFFRVTITEEGTFASVTRGLASFCAGDWETSGRTTIREKVQSTLDQVSKLVRRGLDHEIGN 295 DVD A + + IM+ + F+A KQ+ + +SEFFR T+T +AS TR LASF AGDWE SG+ T+RE+V + LDQ SK+ RRG++HE N Subject 2272 DVDAAVDSATSMPKFMAIMDDMMFNANAWKQLFSTRSEFFRNTVTSSRAYASPTRALASFIAGDWEGSGKVTMRERVVNILDQASKMARRGIEHEFAN 2565
Range 2: 2271 to 2564 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
57.9 bits(120) | 0.0 | 41/98(42%) | 0/98(0%) | Minus/Minus |
Query 1 FPISWSNPLLTSLDT*SSVDCTFSLIVVLPDVSQSPAQKLASPLVTLANVPSSVIVTLKNSLLPAIICLIIFASKPIPFIM*STRSGSAPSVNASSTS 294 F S S P L D *S + T SLIV LP SQSPA KLA+ LV LA V V KNSLL C A + +M A+STS Subject 2271 FANSCSIPRLAIFDA*SRIFTTLSLIVTLPLPSQSPAMKLANALVGLA*ALLDVTVLRKNSLLVLKSCFHALALNIMSSMMAMNLGIEVAESTAASTS 2564
Helminthosporium victoriae 145S virus segment 1 RNA dependent RNA polymerase mRNA, complete cds
Sequence ID: AF297176.1 Length: 3612 Number of Matches: 2
Range 1: 2428 to 2706 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.9 bits(240) | 0.0 | 46/93(49%) | 0/93(0%) | Plus/Plus |
Query 2 DVDEAFTDGADPLRVLHIMNGIGFDAKMIKQMIAGKSEFFRVTITEEGTFASVTRGLASFCAGDWETSGRTTIREKVQSTLDQVSKLVRRGLD 280 DVD+ F D R+L +++ +GF+A KQMI SEFFRVTIT G +AS RGLA+F AG+WE +G +++E+V S +D KL+RRG+D Subject 2428 DVDQEFAQPEDAYRMLAVLDRMGFEATKSKQMIGRNSEFFRVTITRTGAYASPVRGLATFVAGNWEGTGNVSVKERVVSLVDMAWKLIRRGVD 2706
Range 2: 2427 to 2705 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
56.1 bits(116) | 0.0 | 37/93(40%) | 0/93(0%) | Minus/Minus |
Query 1 SNPLLTSLDT*SSVDCTFSLIVVLPDVSQSPAQKLASPLVTLANVPSSVIVTLKNSLLPAIICLIIFASKPIPFIM*STRSGSAPSVNASSTS 279 S P L S S+ T S + P SQ PA +A+P LA P V+VT KNS IIC ASKPI S S+ N+ STS Subject 2427 STPRLISFQAISTKLTTLSFTLTFPVPSQFPATNVANPRTGLAYAPVLVMVTRKNSEFLPIICFDFVASKPILSSTASIL*ASSGCANS*STS 2705
Helminthosporium victoriae 145S virus
Sequence ID: NC_005978.1 Length: 3612 Number of Matches: 2
Range 1: 2428 to 2706 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.9 bits(240) | 0.0 | 46/93(49%) | 0/93(0%) | Plus/Plus |
Query 2 DVDEAFTDGADPLRVLHIMNGIGFDAKMIKQMIAGKSEFFRVTITEEGTFASVTRGLASFCAGDWETSGRTTIREKVQSTLDQVSKLVRRGLD 280 DVD+ F D R+L +++ +GF+A KQMI SEFFRVTIT G +AS RGLA+F AG+WE +G +++E+V S +D KL+RRG+D Subject 2428 DVDQEFAQPEDAYRMLAVLDRMGFEATKSKQMIGRNSEFFRVTITRTGAYASPVRGLATFVAGNWEGTGNVSVKERVVSLVDMAWKLIRRGVD 2706
Range 2: 2427 to 2705 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
56.1 bits(116) | 0.0 | 37/93(40%) | 0/93(0%) | Minus/Minus |
Query 1 SNPLLTSLDT*SSVDCTFSLIVVLPDVSQSPAQKLASPLVTLANVPSSVIVTLKNSLLPAIICLIIFASKPIPFIM*STRSGSAPSVNASSTS 279 S P L S S+ T S + P SQ PA +A+P LA P V+VT KNS IIC ASKPI S S+ N+ STS Subject 2427 STPRLISFQAISTKLTTLSFTLTFPVPSQFPATNVANPRTGLAYAPVLVMVTRKNSEFLPIICFDFVASKPILSSTASIL*ASSGCANS*STS 2705
Nucleotide Sequence (512 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
112.0 | 193.4 | 27% | 9.298e-27 | 33% | HM004067.2 | |
110.1 | 141.9 | 24% | 4.458e-26 | 42% | KP900886.1 | |
107.4 | 141.9 | 23% | 4.515e-26 | 43% | HE579593.1 | |
107.4 | 141.9 | 23% | 4.568e-26 | 43% | HE579598.1 | |
108.7 | 206.3 | 17% | 2.144e-25 | 43% | GQ290649.2 |
Alignments
Verticillium dahliae chrysovirus 1 segment 1, complete sequence
Sequence ID: HM004067.2 Length: 3594 Number of Matches: 3
Range 1: 2045 to 2356 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.0 bits(238) | 0.0 | 43/104(41%) | 0/104(0%) | Minus/Minus |
Query 38 LWEHEDVLAIAEHHKGSRNIFVANLIVHWKGCMHDEEIAPIIKRWYYVGEFHFTEIMKRVHALIRTSDYLFHRKITEPQRQKMMYMDLLVGRKAYTITRELTTD 349 +WEH DV + H G ++FV+ L+ WKG M + A ++ W+ V H+T+ MK VH L+RTS +L +ITE +RQ +MY+DLL+GR Y I D Subject 2045 IWEHSDVYDMCSFHVGEPHVFVSGLVTAWKGLMVKLKYAHLVAPWFCVSYDHWTKAMKAVHTLVRTSRFLMSTEITEDERQSLMYLDLLIGRTTYVINEMAEVD 2356
Range 2: 2372 to 2446 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
32.2 bits(64) | 0.0 | 14/25(56%) | 0/25(0%) | Minus/Minus |
Query 368 GEENKIFPFAEAKEQNRANTTIRRL 442 G+ +IFP E KE +RAN T+RRL Subject 2372 GDMVEIFPPREPKELSRANVTMRRL 2446
Range 3: 2079 to 2387 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
49.2 bits(101) | 0.0 | 34/103(33%) | 0/103(0%) | Plus/Plus |
Query 72 LRPTKRSMYIIFCRCGSVIFL*NR*SLVLINACTRFIISVKWNSPT*YHLLIIGAISSSCIHPFQCTIKLATNMFLDPLWCSAIASTSSCSHKLGTALSKRLI 380 +RP RS YI R SVI + + LV N CT FI V+ + T H A S I PFQ TN + P ++ TS CSH + ++ ++ Subject 2079 VRPISRSRYISDWRSSSVISVLIKKRLVRTNVCTAFIAFVQ*S*DTQNHGATRCAYFSLTIRPFQAVTSPDTNTWGSPT*KEHMS*TSLCSHIANVSSNRLMV 2387
Macrophomina phaseolina chrysovirus 1 isolate TN263 RNA dependent RNA polymerase gene, complete cds
Sequence ID: KP900886.1 Length: 3712 Number of Matches: 2
Range 1: 1313 to 1606 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
110.1 bits(234) | 0.0 | 41/98(42%) | 0/98(0%) | Minus/Plus |
Query 59 NLWEHEDVLAIAEHHKGSRNIFVANLIVHWKGCMHDEEIAPIIKRWYYVGEFHFTEIMKRVHALIRTSDYLFHRKITEPQRQKMMYMDLLVGRKAYTI 352 N+++HED + IA H G +IFVA+L+ WKG + ++ ++ W+ V H+T MK +H+L+RT+ Y + +I+E RQ +MYMDLL+GR YT+ Subject 1313 NIFQHEDAVGIAGAHVGEPHIFVASLLSAWKGLVQFTSVSGLVLPWFKVHSMHWTSRMKDLHSLVRTNRYFMNTEISEKDRQSLMYMDLLIGRAEYTV 1606
Uncultured chrysovirus genomic RNA containing putative RdRp, contig 469Hv1_454_3
Sequence ID: HE579593.1 Length: 1414 Number of Matches: 2
Range 1: 201 to 491 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
107.4 bits(228) | 0.0 | 42/97(43%) | 0/97(0%) | Minus/Plus |
Query 59 LWEHEDVLAIAEHHKGSRNIFVANLIVHWKGCMHDEEIAPIIKRWYYVGEFHFTEIMKRVHALIRTSDYLFHRKITEPQRQKMMYMDLLVGRKAYTI 349 ++EH+DV + +H G +IFV L+ WKG + + A I+ W+ V + MK +H L+RTS +L H +ITE +RQ +MYMDLLVGR +Y I Subject 201 IFEHDDVYTLCSYHVGEPHIFVCGLVSAWKGLVVHLKCASIVSNWFCVSYDKWPNTMKELHTLVRTSRFLMHTEITERERQALMYMDLLVGRTSYVI 491
Uncultured chrysovirus genomic RNA containing putative RdRp, contig 469Hv1_cloning_5
Sequence ID: HE579598.1 Length: 590 Number of Matches: 2
Range 1: 192 to 482 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
107.4 bits(228) | 0.0 | 42/97(43%) | 0/97(0%) | Minus/Plus |
Query 59 LWEHEDVLAIAEHHKGSRNIFVANLIVHWKGCMHDEEIAPIIKRWYYVGEFHFTEIMKRVHALIRTSDYLFHRKITEPQRQKMMYMDLLVGRKAYTI 349 ++EH+DV + +H G +IFV L+ WKG + + A I+ W+ V + MK +H L+RTS +L H +ITE +RQ +MYMDLLVGR +Y I Subject 192 IFEHDDVYTLCSYHVGEPHIFVCGLVSAWKGLVVHLKCASIVSNWFCVSYDKWPNTMKELHTLVRTSRFLMHTEITERERQALMYMDLLVGRTSYVI 482
Cryphonectria nitschkei chrysovirus 1 from Cryphonectria nitschkei BS122 RNA dependent RNA polymerase gene, complete cds
Sequence ID: GQ290649.2 Length: 2978 Number of Matches: 4
Range 1: 1142 to 1432 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
108.7 bits(231) | 0.0 | 42/97(43%) | 0/97(0%) | Minus/Plus |
Query 59 LWEHEDVLAIAEHHKGSRNIFVANLIVHWKGCMHDEEIAPIIKRWYYVGEFHFTEIMKRVHALIRTSDYLFHRKITEPQRQKMMYMDLLVGRKAYTI 349 ++EH+DV ++ +H G ++FV +LI WKG M A ++ RW+ V + I+K +H L+RTS +L + +ITE +RQ +MYMDLLVGR +Y I Subject 1142 IFEHDDVYSLCTYHVGEPHVFVCSLIAEWKGLMVRLPCARLVARWFCVSYDKWPNILKELHTLVRTSRFLMNTEITEKERQALMYMDLLVGRTSYVI 1432
Range 2: 1052 to 1126 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
30.9 bits(61) | 0.0 | 12/25(48%) | 0/25(0%) | Minus/Plus |
Query 368 GEENKIFPFAEAKEQNRANTTIRRL 442 G+ ++FP E KE R+N T+RRL Subject 1052 GDLMEVFPPRETKEVTRSNVTLRRL 1126
Nucleotide Sequence (576 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
117.5 | 171.2 | 29% | 9.848e-35 | 34% | HM004067.2 | |
110.1 | 284.5 | 40% | 1.338e-34 | 34% | GU108588.1 | |
113.8 | 167.1 | 30% | 1.671e-33 | 35% | GQ290652.1 | |
113.8 | 166.2 | 30% | 3.133e-33 | 35% | GQ290650.1 | |
113.8 | 166.2 | 30% | 3.133e-33 | 35% | GQ290651.1 |
Alignments
Verticillium dahliae chrysovirus 1 segment 1, complete sequence
Sequence ID: HM004067.2 Length: 3594 Number of Matches: 2
Range 1: 2111 to 2434 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
117.5 bits(250) | 0.0 | 48/108(44%) | 0/108(0%) | Plus/Minus |
Query 253 EQFPFRSNLERLRANMTIRRMVKVFNIWEHEDCRDIAQYHIGDGNTFVTGLLLHWKGLMQHSGVHNVVRNWYKVSYDKWSDTFKALHNLVRTSNWLFDMPLNEVTRQN 576 E FP R E RAN+T+RR+ + F IWEH D D+ +H+G+ + FV+GL+ WKGLM ++V W+ VSYD W+ KA+H LVRTS +L + E RQ+ Subject 2111 EIFPPREPKELSRANVTMRRLDETFAIWEHSDVYDMCSFHVGEPHVFVSGLVTAWKGLMVKLKYAHLVAPWFCVSYDHWTKAMKAVHTLVRTSRFLMSTEITEDERQS 2434
Range 2: 2465 to 2638 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.8 bits(111) | 0.0 | 20/58(34%) | 0/58(0%) | Plus/Minus |
Query 40 QDFNLLDVVVMFIEGQVPKECVDYYVRLLGLKSAQGFGITKDDWAGVCAKISYGIEPP 213 +D ++ ++V ++ G +P++ VDYYV L ++ FG+T +DW V A+++ GI P Subject 2465 RDIDMAELVRLYDSGIIPRQAVDYYVNLGYTTTSLDFGVTLNDWGPVMAQVADGIGEP 2638
Grapevine associated chrysovirus 1 isolate Ctg446 putative RNA dependent RNA polymerase gene, partial cds
Sequence ID: GU108588.1 Length: 2879 Number of Matches: 6
Range 1: 778 to 1101 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
110.1 bits(234) | 0.0 | 40/108(37%) | 0/108(0%) | Plus/Plus |
Query 253 EQFPFRSNLERLRANMTIRRMVKVFNIWEHEDCRDIAQYHIGDGNTFVTGLLLHWKGLMQHSGVHNVVRNWYKVSYDKWSDTFKALHNLVRTSNWLFDMPLNEVTRQN 576 E F R + E R+N+T+R++++ F+I+ H+D +IA H+G+ FVT +L WKG++Q++ V+ +V+ W V++ WSD K+LH+ +R S +L + + E RQ+ Subject 778 EVFAPRGSKELHRSNVTMRQLIQTFDIFSHDDAYEIASMHVGEPQVFVTSVLSAWKGILQNTSVNFIVKKWMGVNFHHWSDVMKSLHSYIRCSRFLMNTEITEQDRQS 1101
Range 2: 574 to 747 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
56.5 bits(117) | 0.0 | 24/58(41%) | 0/58(0%) | Plus/Plus |
Query 40 QDFNLLDVVVMFIEGQVPKECVDYYVRLLGLKSAQGFGITKDDWAGVCAKISYGIEPP 213 +D N+ D+V MF G VPKECVDYYVR + + FG++ +W+ A+I + P Subject 574 RDVNIHDLVRMFENGMVPKECVDYYVRHSYVPTQFDFGVSMFEWSVAMAEIPPKLNKP 747
Range 3: 535 to 573 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
22.1 bits(42) | 0.0 | 7/13(54%) | 0/13(0%) | Plus/Plus |
Query 7 VPRWVLEGDMPQD 45 VP+WVL G+ D Subject 535 VPKWVLRGERAGD 573
Range 4: 813 to 1097 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
38.6 bits(78) | 0.0 | 32/95(34%) | 0/95(0%) | Minus/Minus |
Query 288 CLVTSFNGISNNQLLVLTKLCNALNVSDHLS*LTLYQFLTTLCTPLCCIRPFQCSNSPVTNVLPSPIWYCAISRQSSCSQMLNTLTILLIVMFAR 572 CL S + LL L C SD LT FLT T + C PF ++ VT SP AIS SS + N IV F R Subject 813 CLSCSVISVFIRNLLHLM*ECKLFITSDQ**KLTPIHFLTMKLTDVFCSMPFHALSTLVTKTCGSPTCIEAIS*ASS*ENISNV*INCRIVTFER 1097
Cryphonectria nitschkei chrysovirus 1 from Cryphonectria nitschkei BS321 RNA dependent RNA polymerase gene, complete cds
Sequence ID: GQ290652.1 Length: 2889 Number of Matches: 2
Range 1: 982 to 1302 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
113.8 bits(242) | 0.0 | 46/107(43%) | 0/107(0%) | Plus/Plus |
Query 253 EQFPFRSNLERLRANMTIRRMVKVFNIWEHEDCRDIAQYHIGDGNTFVTGLLLHWKGLMQHSGVHNVVRNWYKVSYDKWSDTFKALHNLVRTSNWLFDMPLNEVTRQ 573 E FP R E R+N+T+RR+ + F I+EH+D + YH+G+ + FV L+ WKGLM +V W+ VSYDKW + K LH LVRTS +L + + E RQ Subject 982 EVFPPRETKEVTRSNVTLRRLDETFAIFEHDDVYSLCTYHVGEPHVFVCSLIAEWKGLMVRLPCAGLVARWFCVSYDKWPNILKELHTLVRTSRFLMNTEITEKERQ 1302
Range 2: 763 to 951 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.3 bits(110) | 0.0 | 22/63(35%) | 0/63(0%) | Plus/Plus |
Query 25 EGDMPQDFNLLDVVVMFIEGQVPKECVDYYVRLLGLKSAQGFGITKDDWAGVCAKISYGIEPP 213 E +D ++ ++V +F G +P+E VDYYV+ K++ FG+ DWA AK++ I P Subject 763 ESPPDRDVDISELVSLFESGVIPREAVDYYVKQGYTKTSLDFGLGHGDWAPTLAKVASAIGEP 951
Cryphonectria nitschkei chrysovirus 1 from Cryphonectria nitschkei bs131 RNA dependent RNA polymerase gene, complete cds
Sequence ID: GQ290650.1 Length: 2889 Number of Matches: 2
Range 1: 982 to 1302 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
113.8 bits(242) | 0.0 | 46/107(43%) | 0/107(0%) | Plus/Plus |
Query 253 EQFPFRSNLERLRANMTIRRMVKVFNIWEHEDCRDIAQYHIGDGNTFVTGLLLHWKGLMQHSGVHNVVRNWYKVSYDKWSDTFKALHNLVRTSNWLFDMPLNEVTRQ 573 E FP R E R+N+T+RR+ + F I+EH+D + YH+G+ + FV L+ WKGLM +V W+ VSYDKW + K LH LVRTS +L + + E RQ Subject 982 EVFPPRETREVTRSNVTLRRLDETFAIFEHDDVYSLCTYHVGEPHVFVCSLIAEWKGLMVRLPCARLVARWFCVSYDKWPNILKELHTLVRTSRFLMNTEITEKERQ 1302
Range 2: 763 to 951 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.4 bits(108) | 0.0 | 22/63(35%) | 0/63(0%) | Plus/Plus |
Query 25 EGDMPQDFNLLDVVVMFIEGQVPKECVDYYVRLLGLKSAQGFGITKDDWAGVCAKISYGIEPP 213 E +D ++ ++V +F G +P+E VDYYV+ K++ FG+ DWA AK++ I P Subject 763 ESPPDRDVDISELVSLFEGGVIPREAVDYYVKQGYTKTSLDFGLGHGDWAPTLAKVASAIGEP 951
Cryphonectria nitschkei chrysovirus 1 from Cryphonectria nitschkei bs132 RNA dependent RNA polymerase gene, complete cds
Sequence ID: GQ290651.1 Length: 2889 Number of Matches: 2
Range 1: 982 to 1302 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
113.8 bits(242) | 0.0 | 46/107(43%) | 0/107(0%) | Plus/Plus |
Query 253 EQFPFRSNLERLRANMTIRRMVKVFNIWEHEDCRDIAQYHIGDGNTFVTGLLLHWKGLMQHSGVHNVVRNWYKVSYDKWSDTFKALHNLVRTSNWLFDMPLNEVTRQ 573 E FP R E R+N+T+RR+ + F I+EH+D + YH+G+ + FV L+ WKGLM +V W+ VSYDKW + K LH LVRTS +L + + E RQ Subject 982 EVFPPRETREVTRSNVTLRRLDETFAIFEHDDVYSLCTYHVGEPHVFVCSLIAEWKGLMVRLPCARLVARWFCVSYDKWPNILKELHTLVRTSRFLMNTEITEKERQ 1302
Range 2: 763 to 951 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.4 bits(108) | 0.0 | 22/63(35%) | 0/63(0%) | Plus/Plus |
Query 25 EGDMPQDFNLLDVVVMFIEGQVPKECVDYYVRLLGLKSAQGFGITKDDWAGVCAKISYGIEPP 213 E +D ++ ++V +F G +P+E VDYYV+ K++ FG+ DWA AK++ I P Subject 763 ESPPDRDVDISELVSLFEGGVIPREAVDYYVKQGYTKTSLDFGLGHGDWAPTLAKVASAIGEP 951
Nucleotide Sequence (398 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
71.6 | 126.3 | 30% | 1.286e-21 | 38% | HM004067.2 | |
68.4 | 123.6 | 30% | 8.429e-21 | 38% | GU108588.1 | |
66.1 | 119.4 | 30% | 1.406e-19 | 39% | GQ290652.1 | |
67.5 | 119.0 | 30% | 1.922e-19 | 38% | GQ290650.1 | |
67.5 | 119.0 | 30% | 1.922e-19 | 38% | GQ290651.1 |
Alignments
Verticillium dahliae chrysovirus 1 segment 1, complete sequence
Sequence ID: HM004067.2 Length: 3594 Number of Matches: 2
Range 1: 2258 to 2443 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
71.6 bits(150) | 0.0 | 28/62(45%) | 0/62(0%) | Plus/Minus |
Query 205 DVNELFPFGSVRERNRANCTVRRLMKVFKIQKHKEVVDIMSLHVGQRIIFVTSVIAAWKGLL 390 D+ E+FP +E +RAN T+RRL + F I +H +V D+ S HVG+ +FV+ ++ AWKGL+ Subject 2258 DMVEIFPPREPKELSRANVTMRRLDETFAIWEHSDVYDMCSFHVGEPHVFVSGLVTAWKGLM 2443
Range 2: 2462 to 2629 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.7 bits(113) | 0.0 | 21/56(38%) | 0/56(0%) | Plus/Minus |
Query 10 NLYDVVKMNESGMVPKE*VDYYVKEFESVSYEGFGTTLNDWAKLCARVAAEIEDPK 177 ++ ++V++ +SG++P++ VDYYV + + FG TLNDW + A+VA I +P+ Subject 2462 DMAELVRLYDSGIIPRQAVDYYVNLGYTTTSLDFGVTLNDWGPVMAQVADGIGEPQ 2629
Grapevine associated chrysovirus 1 isolate Ctg446 putative RNA dependent RNA polymerase gene, partial cds
Sequence ID: GU108588.1 Length: 2879 Number of Matches: 2
Range 1: 769 to 954 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
68.4 bits(143) | 0.0 | 27/62(44%) | 0/62(0%) | Plus/Plus |
Query 205 DVNELFPFGSVRERNRANCTVRRLMKVFKIQKHKEVVDIMSLHVGQRIIFVTSVIAAWKGLL 390 D+ E+F +E +R+N T+R+L++ F I H + +I S+HVG+ +FVTSV++AWKG+L Subject 769 DMIEVFAPRGSKELHRSNVTMRQLIQTFDIFSHDDAYEIASMHVGEPQVFVTSVLSAWKGIL 954
Range 2: 583 to 750 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
55.1 bits(114) | 0.0 | 21/56(38%) | 0/56(0%) | Plus/Plus |
Query 10 NLYDVVKMNESGMVPKE*VDYYVKEFESVSYEGFGTTLNDWAKLCARVAAEIEDPK 177 N++D+V+M E+GMVPKE VDYYV+ + FG ++ +W+ A + ++ P+ Subject 583 NIHDLVRMFENGMVPKECVDYYVRHSYVPTQFDFGVSMFEWSVAMAEIPPKLNKPE 750
Cryphonectria nitschkei chrysovirus 1 from Cryphonectria nitschkei BS321 RNA dependent RNA polymerase gene, complete cds
Sequence ID: GQ290652.1 Length: 2889 Number of Matches: 2
Range 1: 973 to 1158 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
66.1 bits(138) | 0.0 | 27/62(44%) | 0/62(0%) | Plus/Plus |
Query 205 DVNELFPFGSVRERNRANCTVRRLMKVFKIQKHKEVVDIMSLHVGQRIIFVTSVIAAWKGLL 390 D+ E+FP +E R+N T+RRL + F I +H +V + + HVG+ +FV S+IA WKGL+ Subject 973 DLMEVFPPRETKEVTRSNVTLRRLDETFAIFEHDDVYSLCTYHVGEPHVFVCSLIAEWKGLM 1158
Range 2: 787 to 954 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.3 bits(110) | 0.0 | 22/56(39%) | 0/56(0%) | Plus/Plus |
Query 10 NLYDVVKMNESGMVPKE*VDYYVKEFESVSYEGFGTTLNDWAKLCARVAAEIEDPK 177 ++ ++V + ESG++P+E VDYYVK+ + + FG DWA A+VA+ I +P+ Subject 787 DISELVSLFESGVIPREAVDYYVKQGYTKTSLDFGLGHGDWAPTLAKVASAIGEPQ 954
Cryphonectria nitschkei chrysovirus 1 from Cryphonectria nitschkei bs131 RNA dependent RNA polymerase gene, complete cds
Sequence ID: GQ290650.1 Length: 2889 Number of Matches: 2
Range 1: 973 to 1158 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
67.5 bits(141) | 0.0 | 28/62(45%) | 0/62(0%) | Plus/Plus |
Query 205 DVNELFPFGSVRERNRANCTVRRLMKVFKIQKHKEVVDIMSLHVGQRIIFVTSVIAAWKGLL 390 D+ E+FP RE R+N T+RRL + F I +H +V + + HVG+ +FV S+IA WKGL+ Subject 973 DLMEVFPPRETREVTRSNVTLRRLDETFAIFEHDDVYSLCTYHVGEPHVFVCSLIAEWKGLM 1158
Range 2: 787 to 954 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.5 bits(106) | 0.0 | 21/56(38%) | 0/56(0%) | Plus/Plus |
Query 10 NLYDVVKMNESGMVPKE*VDYYVKEFESVSYEGFGTTLNDWAKLCARVAAEIEDPK 177 ++ ++V + E G++P+E VDYYVK+ + + FG DWA A+VA+ I +P+ Subject 787 DISELVSLFEGGVIPREAVDYYVKQGYTKTSLDFGLGHGDWAPTLAKVASAIGEPQ 954
Cryphonectria nitschkei chrysovirus 1 from Cryphonectria nitschkei bs132 RNA dependent RNA polymerase gene, complete cds
Sequence ID: GQ290651.1 Length: 2889 Number of Matches: 2
Range 1: 973 to 1158 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
67.5 bits(141) | 0.0 | 28/62(45%) | 0/62(0%) | Plus/Plus |
Query 205 DVNELFPFGSVRERNRANCTVRRLMKVFKIQKHKEVVDIMSLHVGQRIIFVTSVIAAWKGLL 390 D+ E+FP RE R+N T+RRL + F I +H +V + + HVG+ +FV S+IA WKGL+ Subject 973 DLMEVFPPRETREVTRSNVTLRRLDETFAIFEHDDVYSLCTYHVGEPHVFVCSLIAEWKGLM 1158
Range 2: 787 to 954 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.5 bits(106) | 0.0 | 21/56(38%) | 0/56(0%) | Plus/Plus |
Query 10 NLYDVVKMNESGMVPKE*VDYYVKEFESVSYEGFGTTLNDWAKLCARVAAEIEDPK 177 ++ ++V + E G++P+E VDYYVK+ + + FG DWA A+VA+ I +P+ Subject 787 DISELVSLFEGGVIPREAVDYYVKQGYTKTSLDFGLGHGDWAPTLAKVASAIGEPQ 954