Nucleotide Sequence (412 letters)
Query ID: | ds2016-56_135 |
Query definition: | No definition line |
Query length: | 156 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
102.8 | 171.7 | 21% | 2.4e-20 | 41% | KP774592.1 | |
102.8 | 171.7 | 21% | 2.4e-20 | 41% | NC_027138.1 | |
98.2 | 98.2 | 20% | 5.747e-19 | 47% | NC_017990.1 | |
117.5 | 177.6 | 20% | 9.252e-25 | 47% | HE579578.1 | |
106.5 | 154.7 | 19% | 1.891e-21 | 48% | KT962972.1 |
Alignments
Sclerotinia sclerotiorum botybirnavirus 1 segment 1, complete sequence
Sequence ID: KP774592.1 Length: 6457 Number of Matches: 2
Range 1: 4891 to 5157 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
102.8 bits(218) | 0.0 | 42/89(47%) | 0/89(0%) | Plus/Plus |
Query 115 CLDYPDFNASHSCRMQRLVVECIADWCKSKGFKAHEDLDTVTDWYAKSFENQYFRVPTTGEWHRANSTMFLRDGQTHPTHSIEIGRASR 381 C DYPDF A+HSCR QRLV+ECI + ++GF ++ + +WYAKSFENQY+ P T EW+RA + MF QT +++ G R Subject 4891 CADYPDFGATHSCRQQRLVLECILEVACAQGFLPDKEFLRIHEWYAKSFENQYWMRPDTYEWYRATTGMFSGVVQTTLINTVMNGALRR 5157
Range 2: 4884 to 5144 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
68.9 bits(144) | 0.0 | 36/87(41%) | 0/87(0%) | Minus/Minus |
Query 108 PISIECVGCVWPSRKNMVELALCHSPVVGTLKY*FSKLLAYQSVTVSKSSCALNPLLLHQSAIHSTTSLCILHEWLALKSG*SRHVI 368 P + VW + +N+ +AL HS V G ++Y FSKLLAY S S NP S++HS TS C E +A KSG*S H + Subject 4884 PFMTVLIKVVWTTPENIPVVALYHS*VSGLIQYWFSKLLAYHSWMRKNSLSGKNPWAQATSSMHSRTSRCWRQECVAPKSG*SAHTL 5144
Sclerotinia sclerotiorum botybirnavirus 1 segment 1, complete sequence
Sequence ID: NC_027138.1 Length: 6457 Number of Matches: 2
Range 1: 4891 to 5157 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
102.8 bits(218) | 0.0 | 42/89(47%) | 0/89(0%) | Plus/Plus |
Query 115 CLDYPDFNASHSCRMQRLVVECIADWCKSKGFKAHEDLDTVTDWYAKSFENQYFRVPTTGEWHRANSTMFLRDGQTHPTHSIEIGRASR 381 C DYPDF A+HSCR QRLV+ECI + ++GF ++ + +WYAKSFENQY+ P T EW+RA + MF QT +++ G R Subject 4891 CADYPDFGATHSCRQQRLVLECILEVACAQGFLPDKEFLRIHEWYAKSFENQYWMRPDTYEWYRATTGMFSGVVQTTLINTVMNGALRR 5157
Range 2: 4884 to 5144 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
68.9 bits(144) | 0.0 | 36/87(41%) | 0/87(0%) | Minus/Minus |
Query 108 PISIECVGCVWPSRKNMVELALCHSPVVGTLKY*FSKLLAYQSVTVSKSSCALNPLLLHQSAIHSTTSLCILHEWLALKSG*SRHVI 368 P + VW + +N+ +AL HS V G ++Y FSKLLAY S S NP S++HS TS C E +A KSG*S H + Subject 4884 PFMTVLIKVVWTTPENIPVVALYHS*VSGLIQYWFSKLLAYHSWMRKNSLSGKNPWAQATSSMHSRTSRCWRQECVAPKSG*SAHTL 5144
Botrytis porri RNA virus 1 RNA 1, complete genome
Sequence ID: NC_017990.1 Length: 6215 Number of Matches: 1
Range 1: 4637 to 4879 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
98.2 bits(208) | 0.0 | 38/81(47%) | 0/81(0%) | Plus/Plus |
Query 100 GKWITCLDYPDFNASHSCRMQRLVVECIADWCKSKGFKAHEDLDTVTDWYAKSFENQYFRVPTTGEWHRANSTMFLRDGQT 342 G+WI CLDY DFNA HS QR V+ + W K GF+ E+ + +++WYA SF NQ+F+ P +W RA S MF QT Subject 4637 GRWIVCLDYADFNAQHSGMAQRSVIRTLYKWAKMMGFQPTEEFNRISEWYADSFTNQWFQRPDNKQWVRAVSGMFSGVRQT 4879
Uncultured chrysovirus genomic RNA containing putative RdRp, contig 447Pv1_454_1
Sequence ID: HE579578.1 Length: 2218 Number of Matches: 2
Range 1: 1362 to 1586 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
117.5 bits(250) | 0.0 | 42/75(56%) | 0/75(0%) | Plus/Plus |
Query 100 GKWITCLDYPDFNASHSCRMQRLVVECIADWCKSKGFKAHEDLDTVTDWYAKSFENQYFRVPTTGEWHRANSTMF 324 G+WI CLDY DFNA HS Q+ V+ CI DW + KGF AH+D D V WYA SFENQ+F+ P T W + S MF Subject 1362 GRWILCLDYSDFNAQHSNAAQKAVITCITDWARKKGFVAHDDFDRVAQWYADSFENQWFQRPDTHTWEKITSGMF 1586
Range 2: 1370 to 1588 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
60.2 bits(125) | 0.0 | 34/73(47%) | 0/73(0%) | Minus/Minus |
Query 108 KNMVELALCHSPVVGTLKY*FSKLLAYQSVTVSKSSCALNPLLLHQSAIHSTTSLCILHEWLALKSG*SRHVI 326 +N+ ++ H V G +*FSKL AY T+SKSS A P L QS IH T+ E ALKS *SRH I Subject 1370 ENIPDVIFSHVWVSGLWNH*FSKLSAYH*ATLSKSSWATKPFLRAQSVIHVITAF*AAFECCALKSE*SRHRI 1588
Sclerotinia sclerotiorum botybirnavirus 2 segment RNA 1, complete sequence
Sequence ID: KT962972.1 Length: 6159 Number of Matches: 2
Range 1: 4547 to 4771 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.5 bits(226) | 0.0 | 38/75(51%) | 0/75(0%) | Plus/Plus |
Query 100 GKWITCLDYPDFNASHSCRMQRLVVECIADWCKSKGFKAHEDLDTVTDWYAKSFENQYFRVPTTGEWHRANSTMF 324 G W+ CLDY DFNASHS ++ RL++E +W SKGFK E+ ++DWYAKSFEN ++ P + EW R S +F Subject 4547 GDWVVCLDYTDFNASHSLKLMRLIIEVATEWAISKGFKPTEEFLKISDWYAKSFENSWYYNPESKEWVRVLSGLF 4771
Range 2: 4564 to 4752 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.3 bits(99) | 0.0 | 30/63(48%) | 0/63(0%) | Minus/Minus |
Query 117 LCHSPVVGTLKY*FSKLLAYQSVTVSKSSCALNPLLLHQSAIHSTTSLCILHEWLALKSG*SR 305 L HS + G + FSKL AYQS + SS LNPL + S S +L L E ALKS *SR Subject 4564 LTHSLLSGL*YHEFSKLFAYQSEILRNSSVGLNPLEMAHSVATSMINLISLSE*EALKSV*SR 4752