Queries
Nucleotide Sequence (282 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
206.3 | 830.9 | 42% | 7.885e-52 | 57% | KY352403.1 | |
164.6 | 371.8 | 32% | 2.881e-39 | 38% | KF688741.1 |
Alignments
Alternaria alternata partitivirus 1 isolate Avi1 segment RNA2, complete sequence
Sequence ID: KY352403.1 Length: 1680 Number of Matches: 7
Range 1: 306 to 584 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
206.3 bits(444) | 0.0 | 83/93(89%) | 0/93(0%) | Minus/Plus |
Query 3 SLSGYRERILSPFKTDKYFHMVSSSYQRLISVKPSIPARFSYEEFLHCSALQLYQRMENVKFDALGVKPPAQNRIPLPRNLRVFQPLWSILAN 281 SLSGYRERILSPFKTDK+FH+VS+SYQRLI+VKPSIP+RF+YEEFLHCSALQLYQR+ENVKFDALGVKP A NRIPLPRNLRVFQP+WSILAN Subject 306 SLSGYRERILSPFKTDKFFHIVSASYQRLINVKPSIPSRFTYEEFLHCSALQLYQRIENVKFDALGVKPAAPNRIPLPRNLRVFQPIWSILAN 584
Range 2: 305 to 586 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
161.9 bits(347) | 0.0 | 75/94(80%) | 0/94(0%) | Plus/Minus |
Query 1 MFARIDQRG*KTRRFLGSGIRF*AGGLTPSASNLTFSIRWYSWRAEQWRNSS*EKRAGIEGFTEMRRW*DELTMWKYLSVLNGDKILSR*PERL 282 MFARIDQ G KTRRFLGSGIRF A G TP+ASNLTFSIR Y+WRAEQ RNSS KR GIEG T +RR *D LTMWK LSVLNGDKILSR PERL Subject 305 MFARIDQMGWKTRRFLGSGIRFGAAGFTPNASNLTFSIR*YNWRAEQ*RNSSYVKRLGIEGLTLIRR**DALTMWKNLSVLNGDKILSRYPERL 586
Range 3: 309 to 584 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
135.8 bits(290) | 0.0 | 57/92(62%) | 0/92(0%) | Plus/Minus |
Query 3 VREN*PEGLKDTEVSGKRDSILSRRLNSKCIKFDILHTLVQLESGAVEKFLVRETSRNRGFYRDETLVGRTHHVEVLVSLKRRQDSLAVTRK 278 V EN*P+GL+DTEVS +R++I S R +++ IK D+ +TL+QLESGA++KF +RET+RNRG D+ L+GRTH+VE LVSLKRRQDSLA+ R+ Subject 309 VCEN*PDGLEDTEVSRERNTIRSSRFHAQRIKLDVFNTLIQLESGAMKKFFIRETARNRGLNIDQALIGRTHNVEELVSLKRRQDSLAIPRE 584
Range 4: 305 to 586 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
107.8 bits(229) | 0.0 | 55/94(59%) | 0/94(0%) | Minus/Plus |
Query 1 EPFWLPRENLVAV*D*QVLPHGEFVLPTSHLGKTLDSCSFLLRGISPLLRSPTVPTYGECQI*CTWS*ASCSESNPASQKPPCLSAPLVNSREH 282 E W+ RENLVAV*D*QVLPH E VL T LDS F + IS LLRSP V TY + Q+*C CSES A +KPPCL A LVNSR+H Subject 305 ESLWVSRENLVAV*D*QVLPHCECVLSTPDQC*ALDS*PFHV*RISSLLRSPIVSTY*KRQV*CVGRETCCSESYSAPEKPPCLPAHLVNSRKH 586
Range 5: 310 to 585 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
103.2 bits(219) | 0.0 | 52/92(57%) | 0/92(0%) | Plus/Minus |
Query 2 CSRELTRGAERHGGFWEAGFDSEQEA*LQVHQI*HSPYVGTVGERSSGEIPRKRNEQESRVLPR*DVGRTNSPCGSTCQS*TATRFSRGNQK 277 C RELTR A RHGGF A +DSEQ+ HQ * YV T+GERS+ EI N ESR V RT+S CG TCQS*TATRFSR Q+ Subject 310 CLRELTRWAGRHGGFSGAEYDSEQQVSRPTHQT*RFQYVDTIGERSNEEILHT*NG*ESRA*H*SGVDRTHSQCGRTCQS*TATRFSRDTQR 585
Range 6: 322 to 495 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
84.5 bits(178) | 0.0 | 39/58(67%) | 0/58(0%) | Minus/Plus |
Query 92 ARESCRRLRLTSTSTW*VRPTNVSSR*NPRFLLVSLTRNFSTAPLSNCTNVWRMSNLM 265 ARESCRRLRLTS+ST *VRP N S +PRFL VS +NF APLSNC NV + S+LM Subject 322 ARESCRRLRLTSSSTL*VRPINA*SMLSPRFLAVSRMKNFFIAPLSNCINVLKTSSLM 495
Botryosphaeria dothidea partitivirus 1 isolate LW 1 segment RNA 2 putative coat protein (CP) gene, complete cds
Sequence ID: KF688741.1 Length: 1623 Number of Matches: 4
Range 1: 271 to 549 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
164.6 bits(353) | 0.0 | 65/93(70%) | 0/93(0%) | Minus/Plus |
Query 3 SLSGYRERILSPFKTDKYFHMVSSSYQRLISVKPSIPARFSYEEFLHCSALQLYQRMENVKFDALGVKPPAQNRIPLPRNLRVFQPLWSILAN 281 S+SG +ERILSPFK DK+FH V S+Q+L+SVKPS+P RFS E+ H SALQLYQR+E VKFD+LG+KP A RIPLPRNLRVF P+WS+LAN Subject 271 SVSGRKERILSPFKADKFFHFVEQSWQKLVSVKPSLPNRFSLAEYRHASALQLYQRIEAVKFDSLGIKPSAPTRIPLPRNLRVFPPIWSVLAN 549
Range 2: 270 to 551 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
97.7 bits(207) | 0.0 | 52/94(55%) | 0/94(0%) | Plus/Minus |
Query 1 MFARIDQRG*KTRRFLGSGIRF*AGGLTPSASNLTFSIRWYSWRAEQWRNSS*EKRAGIEGFTEMRRW*DELTMWKYLSVLNGDKILSR*PERL 282 M AR DQ G TRRF G GI A GL P SNLT SIRWYS AE R S+ E R G G T+ D T WK LS LNGD+ILS PE L Subject 270 MLARTDQMGGNTRRFRGKGILVGAEGLIPRESNLTASIRWYS*SAEACRYSARENRFGRLGLTDTSFCHDCSTKWKNLSALNGDRILSLRPETL 551
Range 3: 288 to 551 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
59.3 bits(123) | 0.0 | 33/88(38%) | 0/88(0%) | Minus/Plus |
Query 1 RENLVAV*D*QVLPHGEFVLPTSHLGKTLDSCSFLLRGISPLLRSPTVPTYGECQI*CTWS*ASCSESNPASQKPPCLSAPLVNSREH 264 RE+ V V* *Q+LP V+ + + +T L R I + TVPT CQ+* +W A S+ N + KP C+ LV SR+H Subject 288 REDSVTV*G*QILPFCRAVMAKACVRQTKPPKPVLSR*IPTCFGTSTVPTD*SCQV*FSWDQALRSDKNTLAPKPSCVPTHLVRSRQH 551
Range 4: 289 to 549 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
50.1 bits(103) | 0.0 | 33/87(38%) | 0/87(0%) | Plus/Minus |
Query 3 VREN*PEGLKDTEVSGKRDSILSRRLNSKCIKFDILHTLVQLESGAVEKFLVRETSRNRGFYRDETLVGRTHHVEVLVSLKRRQDSL 263 V EN P+G + T+VSG+ S S L+ K IK D + LVQL+ ++ F RE F + L + +E VSLKR Q+ L Subject 289 VGENGPDGWEHTKVSGQGYSCRSGGLDPKRIKLDSFNPLVQLKCRSMSVFSEREPVWEAWFDGHKLLP*LLYKMEEFVSLKR*QNPL 549
Nucleotide Sequence (199 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
142.7 | 545.3 | 35% | 4.723e-33 | 52% | KY352403.1 | |
113.3 | 180.8 | 34% | 3.177e-24 | 53% | KF688741.1 |
Alignments
Alternaria alternata partitivirus 1 isolate Avi1 segment RNA2, complete sequence
Sequence ID: KY352403.1 Length: 1680 Number of Matches: 6
Range 1: 363 to 560 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
142.7 bits(305) | 0.0 | 56/66(85%) | 0/66(0%) | Minus/Plus |
Query 1 HMVSSSFQRLISVKPSIPARFSYEEFLHCSALHLYQRMENVKFDALGIKPPAPNRIPLPRNLRVFQ 198 H+VS+S+QRLI+VKPSIP+RF+YEEFLHCSAL LYQR+ENVKFDALG+KP APNRIPLPRNLRVFQ Subject 363 HIVSASYQRLINVKPSIPSRFTYEEFLHCSALQLYQRIENVKFDALGVKPAAPNRIPLPRNLRVFQ 560
Range 2: 362 to 556 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
114.7 bits(244) | 0.0 | 50/65(77%) | 0/65(0%) | Plus/Minus |
Query 5 KTRRFLGSGIRFGAGGLIPSASNLTFSIRWYRWRAEQWRNSSYEKRAGIEGFTEMRRWKDELTMW 199 KTRRFLGSGIRFGA G P+ASNLTFSIR Y WRAEQ RNSSY KR GIEG T +RR D LTMW Subject 362 KTRRFLGSGIRFGAAGFTPNASNLTFSIR*YNWRAEQ*RNSSYVKRLGIEGLTLIRR**DALTMW 556
Range 3: 363 to 560 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
93.2 bits(197) | 0.0 | 38/66(58%) | 0/66(0%) | Plus/Minus |
Query 1 LKDTEVSGKRDSIRGRRFNSKCIKFDILHTLVQMESGAMEKFLI*ETSRNRGFHRDETLEGRTHHV 198 L+DTEVS +R++IR RF+++ IK D+ +TL+Q+ESGAM+KF I ET+RNRG + D+ L GRTH+V Subject 363 LEDTEVSRERNTIRSSRFHAQRIKLDVFNTLIQLESGAMKKFFIRETARNRGLNIDQALIGRTHNV 560
Range 4: 364 to 555 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
71.2 bits(149) | 0.0 | 38/64(59%) | 0/64(0%) | Minus/Plus |
Query 6 TW*VRPSNVSSR*NPRFLLVSHMRNFSIAPLSICTNVWRMSNLMHLELNLLPRIESRFPETSVS 197 T *VRP N S +PRFL VS M+NF IAPLS C NV + S+LM NLL RI R ETSVS Subject 364 TL*VRPINA*SMLSPRFLAVSRMKNFFIAPLSNCINVLKTSSLMRWA*NLLLRIVFRSRETSVS 555
Range 5: 362 to 556 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
64.8 bits(135) | 0.0 | 34/65(52%) | 0/65(0%) | Minus/Plus |
Query 5 PHGEFVLPTSHLGETLDSCSFLI*GISPLLRSPSVPTYGECQI*CTWN*TSCPESNPASQKPPCL 199 PH E VL T LDS F +* IS LLRSP V TY + Q+*C T C ES A +KPPCL Subject 362 PHCECVLSTPDQC*ALDS*PFHV*RISSLLRSPIVSTY*KRQV*CVGRETCCSESYSAPEKPPCL 556
Range 6: 364 to 555 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
58.8 bits(122) | 0.0 | 33/64(52%) | 0/64(0%) | Plus/Minus |
Query 6 RHGGFWEAGFDSGQEV*FQVHQI*HSPYVGTDGERSNGEIPHMRNEQESRVSPR*DVGRTNSPC 197 RHGGF A +DS Q+V HQ * YV T GERSN EI H N ESR V RT+S C Subject 364 RHGGFSGAEYDSEQQVSRPTHQT*RFQYVDTIGERSNEEILHT*NG*ESRA*H*SGVDRTHSQC 555
Botryosphaeria dothidea partitivirus 1 isolate LW 1 segment RNA 2 putative coat protein (CP) gene, complete cds
Sequence ID: KF688741.1 Length: 1623 Number of Matches: 2
Range 1: 328 to 522 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
113.3 bits(241) | 0.0 | 46/65(71%) | 0/65(0%) | Minus/Plus |
Query 4 HMVSSSFQRLISVKPSIPARFSYEEFLHCSALHLYQRMENVKFDALGIKPPAPNRIPLPRNLRVF 198 H V S+Q+L+SVKPS+P RFS E+ H SAL LYQR+E VKFD+LGIKP AP RIPLPRNLRVF Subject 328 HFVEQSWQKLVSVKPSLPNRFSLAEYRHASALQLYQRIEAVKFDSLGIKPSAPTRIPLPRNLRVF 522
Range 2: 327 to 518 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
67.5 bits(141) | 0.0 | 34/64(53%) | 0/64(0%) | Plus/Minus |
Query 8 TRRFLGSGIRFGAGGLIPSASNLTFSIRWYRWRAEQWRNSSYEKRAGIEGFTEMRRWKDELTMW 199 TRRF G GI GA GLIP SNLT SIRWY AE R S+ E R G G T+ D T W Subject 327 TRRFRGKGILVGAEGLIPRESNLTASIRWYS*SAEACRYSARENRFGRLGLTDTSFCHDCSTKW 518
Nucleotide Sequence (171 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
128.9 | 491.6 | 32% | 3.672e-29 | 56% | KY352403.1 | |
104.6 | 171.2 | 33% | 7.491e-22 | 60% | KF688741.1 |
Alignments
Alternaria alternata partitivirus 1 isolate Avi1 segment RNA2, complete sequence
Sequence ID: KY352403.1 Length: 1680 Number of Matches: 6
Range 1: 390 to 560 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.9 bits(275) | 0.0 | 51/57(89%) | 0/57(0%) | Minus/Plus |
Query 1 LISVKPSIPARFSYEEFLHCSALQLYQRMENVKFDALGIKPPAPNRIPLPRNLRVFQ 171 LI+VKPSIP+RF+YEEFLHCSALQLYQR+ENVKFDALG+KP APNRIPLPRNLRVFQ Subject 390 LINVKPSIPSRFTYEEFLHCSALQLYQRIENVKFDALGVKPAAPNRIPLPRNLRVFQ 560
Range 2: 398 to 556 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.4 bits(215) | 0.0 | 43/53(81%) | 0/53(0%) | Plus/Minus |
Query 5 KTRRFLGSGIRFGAGGLIPSASNLTFSIRWYSWRAEQWRNSSYEKRAGIEGFT 163 KTRRFLGSGIRFGA G P+ASNLTFSIR Y+WRAEQ RNSSY KR GIEG T Subject 398 KTRRFLGSGIRFGAAGFTPNASNLTFSIR*YNWRAEQ*RNSSYVKRLGIEGLT 556
Range 3: 390 to 560 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
80.3 bits(169) | 0.0 | 33/57(58%) | 0/57(0%) | Plus/Minus |
Query 1 LKDTEVSGKRDSIRGRRFNSKCIKFDILHTLVQLESGAMEKFLI*ETSRNRGFHRDE 171 L+DTEVS +R++IR RF+++ IK D+ +TL+QLESGAM+KF I ET+RNRG + D+ Subject 390 LEDTEVSRERNTIRSSRFHAQRIKLDVFNTLIQLESGAMKKFFIRETARNRGLNIDQ 560
Range 4: 403 to 555 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
66.6 bits(139) | 0.0 | 32/51(63%) | 0/51(0%) | Minus/Plus |
Query 6 NPRFLLVSHMRNFSIAPLSNCTNVWRMSNLMHLELNLLPRIESRFPETSVS 158 +PRFL VS M+NF IAPLSNC NV + S+LM NLL RI R ETSVS Subject 403 SPRFLAVSRMKNFFIAPLSNCINVLKTSSLMRWA*NLLLRIVFRSRETSVS 555
Botryosphaeria dothidea partitivirus 1 isolate LW 1 segment RNA 2 putative coat protein (CP) gene, complete cds
Sequence ID: KF688741.1 Length: 1623 Number of Matches: 2
Range 1: 355 to 522 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
104.6 bits(222) | 0.0 | 43/56(77%) | 0/56(0%) | Minus/Plus |
Query 4 LISVKPSIPARFSYEEFLHCSALQLYQRMENVKFDALGIKPPAPNRIPLPRNLRVF 171 L+SVKPS+P RFS E+ H SALQLYQR+E VKFD+LGIKP AP RIPLPRNLRVF Subject 355 LVSVKPSLPNRFSLAEYRHASALQLYQRIEAVKFDSLGIKPSAPTRIPLPRNLRVF 522
Range 2: 360 to 518 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
66.6 bits(139) | 0.0 | 32/53(60%) | 0/53(0%) | Plus/Minus |
Query 8 TRRFLGSGIRFGAGGLIPSASNLTFSIRWYSWRAEQWRNSSYEKRAGIEGFTE 166 TRRF G GI GA GLIP SNLT SIRWYS AE R S+ E R G G T+ Subject 360 TRRFRGKGILVGAEGLIPRESNLTASIRWYS*SAEACRYSARENRFGRLGLTD 518
Nucleotide Sequence (348 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
154.6 | 746.1 | 30% | 4.633e-36 | 65% | KY352403.1 | |
104.2 | 200.1 | 25% | 7.01e-21 | 58% | KF688741.1 |
Alignments
Alternaria alternata partitivirus 1 isolate Avi1 segment RNA2, complete sequence
Sequence ID: KY352403.1 Length: 1680 Number of Matches: 7
Range 1: 218 to 487 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
154.6 bits(331) | 0.0 | 73/90(81%) | 0/90(0%) | Minus/Minus |
Query 78 LTFSIRWYSWRAEQWRNSSYEKRAGIEGFTEMSRW*DELTMWKYLSVLNGDKILSR*PERLKP*LSRAALPSA*PGVDLEDEDSVFELED 347 LTFSIR Y+WRAEQ RNSSY KR GIEG T + R *D LTMWK LSVLNGDKILSR PERLKP*L RAALPSA PGVDLE E SVFELED Subject 218 LTFSIR*YNWRAEQ*RNSSYVKRLGIEGLTLIRR**DALTMWKNLSVLNGDKILSRYPERLKP*LRRAALPSAKPGVDLEFEVSVFELED 487
Range 2: 261 to 488 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
139.9 bits(299) | 0.0 | 68/76(89%) | 0/76(0%) | Plus/Plus |
Query 121 PGYAEGNAAXXXXXXXXXXXRERILSPFKTDKYFHMVSSSYQRLISVKPSIPARFSYEEFLHCSALQLYQRMENVK 348 PG+AEGNAALLSYGLSLSGYRERILSPFKTDK+FH+VS+SYQRLI+VKPSIP+RF+YEEFLHCSALQLYQR+ENVK Subject 261 PGFAEGNAALLSYGLSLSGYRERILSPFKTDKFFHIVSASYQRLINVKPSIPSRFTYEEFLHCSALQLYQRIENVK 488
Range 3: 261 to 485 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
120.7 bits(257) | 0.0 | 51/75(68%) | 0/75(0%) | Minus/Minus |
Query 121 DILHTLVQLESGAMEKFLI*ETSRNRGFHRDESLVGRTHHVEVLVSLKRRQDSLAVTRKAQTVAK*GSIALGIAG 345 D+ +TL+QLESGAM+KF I ET+RNRG + D++L+GRTH+VE LVSLKRRQDSLA+ R+ QT+A+ GSIALG AG Subject 261 DVFNTLIQLESGAMKKFFIRETARNRGLNIDQALIGRTHNVEELVSLKRRQDSLAIPRETQTIAEEGSIALGKAG 485
Range 4: 215 to 475 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
118.4 bits(252) | 0.0 | 58/87(67%) | 0/87(0%) | Plus/Plus |
Query 75 KVLEFEDRVFVL*IDSRLCRGQCCPT*LRFEPFWLPRENLVAV*D*QVLPHGEFVLPTTHLGETLDSCSFLI*GISPLLRSPTVPTY 335 +VLEFEDR F L ID+RLCRGQCCP L FE W+ RENLVAV*D*QVLPH E VL T LDS F +* IS LLRSP V TY Subject 215 QVLEFEDRDFELQIDTRLCRGQCCPPQLWFESLWVSRENLVAV*D*QVLPHCECVLSTPDQC*ALDS*PFHV*RISSLLRSPIVSTY 475
Range 5: 265 to 486 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
103.2 bits(219) | 0.0 | 50/74(68%) | 0/74(0%) | Plus/Plus |
Query 125 AMPRAMLPYLATV*AFLVTARESCRRLRLTSTSTW*VRPTNDSSR*NPRFLLVSHMRNFSIAPLSNCTNVWRMS 346 A+PRAMLP A V* L ARESCRRLRLTS+ST *VRP N S +PRFL VS M+NF IAPLSNC NV + S Subject 265 ALPRAMLPSSAMV*VSLGIARESCRRLRLTSSSTL*VRPINA*SMLSPRFLAVSRMKNFFIAPLSNCINVLKTS 486
Botryosphaeria dothidea partitivirus 1 isolate LW 1 segment RNA 2 putative coat protein (CP) gene, complete cds
Sequence ID: KF688741.1 Length: 1623 Number of Matches: 2
Range 1: 226 to 453 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
104.2 bits(221) | 0.0 | 49/76(64%) | 0/76(0%) | Plus/Plus |
Query 121 PGYAEGNAAXXXXXXXXXXXRERILSPFKTDKYFHMVSSSYQRLISVKPSIPARFSYEEFLHCSALQLYQRMENVK 348 PG++EG + L +YGLS+SG +ERILSPFK DK+FH V S+Q+L+SVKPS+P RFS E+ H SALQLYQR+E VK Subject 226 PGFSEGTSVLQNYGLSVSGRKERILSPFKADKFFHFVEQSWQKLVSVKPSLPNRFSLAEYRHASALQLYQRIEAVK 453
Range 2: 195 to 452 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
95.9 bits(203) | 0.0 | 50/86(58%) | 0/86(0%) | Minus/Minus |
Query 90 LTFSIRWYSWRAEQWRNSSYEKRAGIEGFTEMSRW*DELTMWKYLSVLNGDKILSR*PERLKP*LSRAALPSA*PGVDLEDEDSVF 347 LT SIRWYS AE R S+ E R G G T+ S D T WK LS LNGD+ILS PE L P* R +PS PGVDLE EDSVF Subject 195 LTASIRWYS*SAEACRYSARENRFGRLGLTDTSFCHDCSTKWKNLSALNGDRILSLRPETLSP*F*RTEVPSENPGVDLELEDSVF 452
Nucleotide Sequence (191 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
140.4 | 587.4 | 32% | 1.878e-32 | 62% | KY352403.1 | |
106.5 | 172.1 | 33% | 3.026e-22 | 54% | KF688741.1 |
Alignments
Alternaria alternata partitivirus 1 isolate Avi1 segment RNA2, complete sequence
Sequence ID: KY352403.1 Length: 1680 Number of Matches: 6
Range 1: 300 to 488 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
140.4 bits(300) | 0.0 | 56/63(89%) | 0/63(0%) | Plus/Plus |
Query 3 GLSLSGYRERILSPFKTDKYFHMVSSSYQRLISVKPSIPARFSYEEFLHCSALQLYQRMENVK 191 GLSLSGYRERILSPFKTDK+FH+VS+SYQRLI+VKPSIP+RF+YEEFLHCSALQLYQR+ENVK Subject 300 GLSLSGYRERILSPFKTDKFFHIVSASYQRLINVKPSIPSRFTYEEFLHCSALQLYQRIENVK 488
Range 2: 299 to 487 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.9 bits(240) | 0.0 | 51/63(81%) | 0/63(0%) | Minus/Minus |
Query 2 LTFSIRWYSWRAEQWRNSSYEKRAGIEGFTEMRRW*DELTMWKYLSVLNGDKILSR*PERLKP 190 LTFSIR Y+WRAEQ RNSSY KR GIEG T +RR *D LTMWK LSVLNGDKILSR PERLKP Subject 299 LTFSIR*YNWRAEQ*RNSSYVKRLGIEGLTLIRR**DALTMWKNLSVLNGDKILSRYPERLKP 487
Range 3: 300 to 485 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
102.3 bits(217) | 0.0 | 42/62(68%) | 0/62(0%) | Minus/Minus |
Query 3 DILHTLVQLESGAMEKFLI*ETSRNRGFHRDETLVGRTHHVEVLVSLKRRQDSLAVTRKAQT 188 D+ +TL+QLESGAM+KF I ET+RNRG + D+ L+GRTH+VE LVSLKRRQDSLA+ R+ QT Subject 300 DVFNTLIQLESGAMKKFFIRETARNRGLNIDQALIGRTHNVEELVSLKRRQDSLAIPRETQT 485
Range 4: 301 to 486 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
87.2 bits(184) | 0.0 | 42/62(68%) | 0/62(0%) | Plus/Plus |
Query 4 V*AFLVTARESCRRLRLTSTSTW*VRPTNVSSR*NPRFLLVSHMRNFSIAPLSNCTNVWRMS 189 V* L ARESCRRLRLTS+ST *VRP N S +PRFL VS M+NF IAPLSNC NV + S Subject 301 V*VSLGIARESCRRLRLTSSSTL*VRPINA*SMLSPRFLAVSRMKNFFIAPLSNCINVLKTS 486
Range 5: 301 to 474 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
73.5 bits(154) | 0.0 | 36/58(62%) | 0/58(0%) | Minus/Minus |
Query 4 YVGTVGERSNGEIPHMRNEQESRVSPR*DVGRTNSPCGSTCQS*TATRFSRGNQKGSN 177 YV T+GERSN EI H N ESR V RT+S CG TCQS*TATRFSR Q+ SN Subject 301 YVDTIGERSNEEILHT*NG*ESRA*H*SGVDRTHSQCGRTCQS*TATRFSRDTQRDSN 474
Range 6: 302 to 475 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
71.2 bits(149) | 0.0 | 37/58(64%) | 0/58(0%) | Plus/Plus |
Query 5 FEPFWLPRENLVAV*D*QVLPHGEFVLPTSHLGETLDSCSFLI*GISPLLRSPTVPTY 178 FE W+ RENLVAV*D*QVLPH E VL T LDS F +* IS LLRSP V TY Subject 302 FESLWVSRENLVAV*D*QVLPHCECVLSTPDQC*ALDS*PFHV*RISSLLRSPIVSTY 475
Botryosphaeria dothidea partitivirus 1 isolate LW 1 segment RNA 2 putative coat protein (CP) gene, complete cds
Sequence ID: KF688741.1 Length: 1623 Number of Matches: 2
Range 1: 265 to 453 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.5 bits(226) | 0.0 | 43/63(68%) | 0/63(0%) | Plus/Plus |
Query 3 GLSLSGYRERILSPFKTDKYFHMVSSSYQRLISVKPSIPARFSYEEFLHCSALQLYQRMENVK 191 GLS+SG +ERILSPFK DK+FH V S+Q+L+SVKPS+P RFS E+ H SALQLYQR+E VK Subject 265 GLSVSGRKERILSPFKADKFFHFVEQSWQKLVSVKPSLPNRFSLAEYRHASALQLYQRIEAVK 453
Range 2: 264 to 452 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
65.7 bits(137) | 0.0 | 34/63(54%) | 0/63(0%) | Minus/Minus |
Query 2 LTFSIRWYSWRAEQWRNSSYEKRAGIEGFTEMRRW*DELTMWKYLSVLNGDKILSR*PERLKP 190 LT SIRWYS AE R S+ E R G G T+ D T WK LS LNGD+ILS PE L P Subject 264 LTASIRWYS*SAEACRYSARENRFGRLGLTDTSFCHDCSTKWKNLSALNGDRILSLRPETLSP 452
Nucleotide Sequence (306 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
224.2 | 641.5 | 43% | 4.032e-57 | 47% | KY352402.1 | |
200.4 | 539.6 | 24% | 5.877e-50 | 43% | KF688740.1 | |
48.7 | 48.7 | 15% | 0.0002664 | 43% | KX884238.1 | |
48.7 | 48.7 | 15% | 0.0002664 | 43% | NC_032131.1 |
Alignments
Alternaria alternata partitivirus 1 isolate Avi1 segment RNA1, complete sequence
Sequence ID: KY352402.1 Length: 1833 Number of Matches: 6
Range 1: 830 to 1132 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
224.2 bits(483) | 0.0 | 89/101(88%) | 0/101(0%) | Minus/Plus |
Query 3 VKVMEMRYCIPLVKRFSDMFGKTPYPVGRNMTKALPFIIDNLLDDKKFGLVTDISKLDTSVGPDWIDWAFSQLKSFFDMGMTASSETRNSHVFDFLHYYFK 305 VKV+EMRYCIPL+KRFS+MFGKTPYPVGRNMTKALPFIID+LL DKKFGLVTDISKLDTSVGPDWIDWAFSQLKSFFD G T SSE R+S+VFDFLH+YFK Subject 830 VKVIEMRYCIPLMKRFSEMFGKTPYPVGRNMTKALPFIIDHLLQDKKFGLVTDISKLDTSVGPDWIDWAFSQLKSFFDFGFTLSSERRDSNVFDFLHFYFK 1132
Range 2: 829 to 1134 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
156.9 bits(336) | 0.0 | 76/102(75%) | 0/102(0%) | Plus/Minus |
Query 1 RLK***RKSKTCELRVSEEAVMPMSKNDLSCEKAQSIQSGPTDVSSLLISVTRPNFLSSSRLSIMKGSALVILRPTG*GVLPNMSEKRLTKGMQ*RISMTLT 306 RLK* *RKSKT R S+E+V P SK DLS EKAQSIQSGPT+VSS +SVTRPNFLS R S++KG A VILRPTG*GVLPN+SEKR GMQ*RISMTLT Subject 829 RLK*K*RKSKTLLSRRSDESVKPKSKKDLS*EKAQSIQSGPTEVSSFEMSVTRPNFLSCKRWSMIKGRAFVILRPTG*GVLPNISEKRFINGMQ*RISMTLT 1134
Range 3: 830 to 1132 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
98.2 bits(208) | 0.0 | 47/101(47%) | 0/101(0%) | Plus/Minus |
Query 3 FEVVMKKVENM*IASLRRSCHAHVEERLELRESPVDPIWTN*CIKLTDIGDKTEFLIIK*VVNNER*CLSHIATYRVRGLAKHVGKAFN*RYAVTHFHDFD 305 F+V +KKVE++ I R C VEE LELRESP+ PI T+ I+ ++ ++ + LI++ +V+++R L HI T RVR AKH+ +AF+* AVTH +DFD Subject 830 FKVEVKKVEDIAITPF*RKCETEVEEGLELRESPIYPIRTDRGIEF*NVSNEAKLLILQEMVDDKRQSLCHITTDRVRCFAKHLREAFH*WNAVTHLNDFD 1132
Range 4: 829 to 945 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.8 bits(111) | 0.0 | 22/39(56%) | 0/39(0%) | Minus/Plus |
Query 190 SQSHGNALLHTFS*TLFRHVWQDPLPCRSQYD*GTTFHY 306 SQSH +ALLH+ + TL VWQ+ LPCRS YD G+ F++ Subject 829 SQSH*DALLHSINETLL*DVWQNTLPCRS*YDKGSAFYH 945
Range 5: 1003 to 1134 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
43.7 bits(89) | 0.0 | 24/44(55%) | 0/44(0%) | Minus/Plus |
Query 1 YISWSRLDRLGFLAAQVVLRHGHDSFF*DSQFTCFRLSSLLLQT 132 Y+ S LDRLGFL+AQV+LR +F + C RLSSLLL T Subject 1003 YLCRS*LDRLGFLSAQVLLRLRFHTFVRTA**QCLRLSSLLL*T 1134
Range 6: 831 to 1061 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
64.8 bits(135) | 0.0 | 38/77(49%) | 0/77(0%) | Plus/Minus |
Query 74 RRTT*AARKPSRSNLDQLMYQAY*YR*QDRISYHQVGCQ**KVVP*SYCDLQGKGSCQTCRKSV*LKVCSNAFP*L* 304 RR T*A RKP+ SN D+ Y+ +*+ + SY +**K P SY D QGK CQT ++SV L CSNA *L* Subject 831 RRRT*AERKPNLSNQDRQRYRVLKCQ*RGQTSYPARDGR**KAEPLSYYDRQGKVFCQTSQRSVSLMECSNASQ*L* 1061
Botryosphaeria dothidea partitivirus 1 isolate LW 1 segment RNA 1 putative RNA dependent RNA polymerase (RdRp) gene, complete cds
Sequence ID: KF688740.1 Length: 1823 Number of Matches: 5
Range 1: 830 to 1132 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
200.4 bits(431) | 0.0 | 80/101(79%) | 0/101(0%) | Minus/Plus |
Query 3 VKVMEMRYCIPLVKRFSDMFGKTPYPVGRNMTKALPFIIDNLLDDKKFGLVTDISKLDTSVGPDWIDWAFSQLKSFFDMGMTASSETRNSHVFDFLHYYFK 305 VKV+EMRY IPL++RF FGK PYPVG N+TKALPFIID+LL+D K G VTD+SKLDTSVGPDWIDWAFS LK F+ MGMT SSETRNSHVFDFLHYYFK Subject 830 VKVIEMRYVIPLLERFKSQFGKIPYPVGVNLTKALPFIIDHLLNDGKHGFVTDVSKLDTSVGPDWIDWAFSFLKDFYYMGMTESSETRNSHVFDFLHYYFK 1132
Range 2: 829 to 1134 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
120.7 bits(257) | 0.0 | 63/102(62%) | 0/102(0%) | Plus/Minus |
Query 1 RLK***RKSKTCELRVSEEAVMPMSKNDLSCEKAQSIQSGPTDVSSLLISVTRPNFLSSSRLSIMKGSALVILRPTG*GVLPNMSEKRLTKGMQ*RISMTLT 306 RLK** +KSKT ELRVS ++VMPM L E AQSIQSGPTDVS+ SVT+P F S ++ S+MKG ALV L PTG G+ PN KR +GM *RIS+TLT Subject 829 RLK**CKKSKTWELRVSLDSVMPM**KSLRKENAQSIQSGPTDVSNFDTSVTKPCFPSFNK*SMMKGRALVRLTPTGYGIFPN*DLKRSRRGMT*RISITLT 1134
Range 3: 830 to 1129 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
82.2 bits(173) | 0.0 | 45/100(45%) | 0/100(0%) | Plus/Minus |
Query 6 EVVMKKVENM*IASLRRSCHAHVEERLELRESPVDPIWTN*CIKLTDIGDKTEFLIIK*VVNNER*CLSHIATYRVRGLAKHVGKAFN*RYAVTHFHDFD 305 EVV+++VE++ IA L CHAHV E L+ E PVDP+ TN + L IGDKT II+ V+++ER L I + RVR L + +AF VTH ++ D Subject 830 EVVVQEVEDVGIARLA*FCHAHVVEVLKKGERPVDPVRTNGRV*LRHIGDKTVLSIIQQVIDDERESLGKIDSDRVRNLPELRFEAFEEGNDVTHLNNLD 1129
Range 4: 829 to 1131 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.0 bits(164) | 0.0 | 43/101(43%) | 0/101(0%) | Minus/Plus |
Query 4 SQSHGNALLHTFS*TLFRHVWQDPLPCRSQYD*GTTFHY*QPT***EIRSCHRYQ*A*YISWSRLDRLGFLAAQVVLRHGHDSFF*DSQFTCFRLSSLLLQ 306 SQ + +AL H+ TL + +D +PCRSQ G+ FH+ * + R CHR ++ WS LDRLG L + +L HGHD D+QF RL +LLLQ Subject 829 SQGY*DALRHSPPRTLQISIREDSVPCRSQSYQGSPFHHRSLVE*WKARFCHRCVEVRHVRWS*LDRLGVLLS*GLLLHGHDRIKRDAQFPRLRLLALLLQ 1131
Range 5: 927 to 1130 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
58.3 bits(121) | 0.0 | 31/68(46%) | 0/68(0%) | Plus/Minus |
Query 5 *SSNEESRKHVNCESQKKLSCPCRRTT*AARKPSRSNLDQLMYQAY*YR*QDRISYHQVGCQ**KVVP 208 *SS+ SR+ NC S+ LSCPC R+ * R PSRS+ DQ +R*Q+R +H +**K P Subject 927 *SSSARSRRRGNCASRLILSCPCSRSP*ERRTPSRSSQDQRTCLTSTHR*QNRAFHHSTSDR**KGEP 1130
Xinzhou partiti like virus 1 strain XZSJSC65291 segment Seg 1 RdRp gene, complete cds
Sequence ID: KX884238.1 Length: 1523 Number of Matches: 1
Xinzhou partiti like virus 1 strain XZSJSC65291 segment Seg 1 RdRp gene, complete cds
Sequence ID: NC_032131.1 Length: 1523 Number of Matches: 1
Nucleotide Sequence (574 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
338.9 | 1163.2 | 60% | 3.283e-91 | 48% | KY352403.1 | |
254.2 | 456.6 | 18% | 1.01e-65 | 30% | KF688741.1 |
Alignments
Alternaria alternata partitivirus 1 isolate Avi1 segment RNA2, complete sequence
Sequence ID: KY352403.1 Length: 1680 Number of Matches: 7
Range 1: 999 to 1571 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
338.9 bits(742) | 0.0 | 151/191(79%) | 0/191(0%) | Plus/Plus |
Query 1 KWYNVGLPNSELKKLPGYKLEGDYLTEVEQLMDQARSAKRERITPRFDPAYEPTSYKISDGTITSSTGAYGARLHWDPQLWLDYENFVNEVASVAMFSLSMPIETTGTYAWVLPVEKRTDNTSAVFAKLPKASVPTQTWVXXXXXXXXXXXXHRRSTWYKESDSLTNITGLRLRYIQAAIKTPSPVEQYGT 573 KWY+ GL + ++K YK E YL EV +LM QA++AKRERITP D AY+P SY ISDG+++SS GAYGARLHWDPQLWLDYENFVNEVASVAMFSLSMP+ETTGTYAWVLPVEKRTD+++AVF KLPKASVPTQTW+LALLLQSSTLP RRSTWY ESD+LTNITGLRLRYIQAAIKTPSPVEQYGT Subject 999 KWYHTGLDPTAVRKTTSYKTETGYLEEVNELMKQAKAAKRERITPILDSAYKPESYTISDGSVSSSPGAYGARLHWDPQLWLDYENFVNEVASVAMFSLSMPVETTGTYAWVLPVEKRTDSSAAVFCKLPKASVPTQTWILALLLQSSTLPFSRRSTWYTESDALTNITGLRLRYIQAAIKTPSPVEQYGT 1571
Range 2: 1100 to 1570 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
267.3 bits(577) | 0.0 | 122/157(78%) | 0/157(0%) | Minus/Minus |
Query 102 VPYCSTGDGVLIAACIYRSRNPVMLVKESDSLYQVDRLCNGRVDDWRRRASTQVCVGTLAFGSLAKTAEVLSVRFSTGRTQA*VPVVSIGIERENIATEATSLTKFS*SNQSCGSQWRRAP*APVDEVIVPSEIL*DVGS*AGSKRGVIRSRFAERA 572 VPYCSTGDGVLIAACIYR+R PVMLV+ SDS+YQVDRL NGRVDD RRRA QVCVGTLAFGSL KTA LSVRFSTGRTQA*VPVVS G++ ENIATEATSLTKFS*S+QS GSQWRRAP*AP +E PSE++ D G A S+ GVI SRFA A Subject 1100 VPYCSTGDGVLIAACIYRNRKPVMLVRASDSVYQVDRLLNGRVDDCRRRARIQVCVGTLAFGSLQKTAAELSVRFSTGRTQA*VPVVSTGMDNENIATEATSLTKFS*SSQSWGSQWRRAP*APGEEETEPSEMVYDSGLYAESRMGVILSRFAALA 1570
Range 3: 1034 to 1564 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
169.2 bits(363) | 0.0 | 88/177(50%) | 0/177(0%) | Plus/Plus |
Query 36 EETPRLQTRR*LSHRSRTVNGSSTFCKTRANHSSL*SRLRTDILQDL*WYNHLVNRCLRSSPPLGSTTLVRL*KLCQRSSFCSYVFSFYADRNYRYLRLGSTGRKTD*QYLRRFCQTPKG*RPHTNLGTRSPPPIVYSPVT*TIHLV*RI*LFD*HHRVTTSIYTSRNQDSITSRTI 566 EE LQ R L RS+ + + C+TR +HS * ++ I+ W+ LRS PPLG TL L KLCQ S FCS VF +A NYR+L LG G KTD*Q+ QTPKG*RPHTNL +RSPP +VYS + * +HLV I* D*HH +T ++YTS NQ+SI+ TI Subject 1034 EEDHFLQDRNRLPRRSQRTDETG*SCETRKDHSHP*LCVQA*IIYHFRWFCFFFPWRLRSPPPLGPPTLAGLRKLCQ*SRFCSNVFIIHAR*NYRHLCLGPPG*KTD*QFCCSLLQTPKG*RPHTNLDSRSPPAVVYSTI**AVHLVY*I*CPD*HHWLTITVYTSCNQNSISRGTI 1564
Range 4: 1059 to 1415 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
125.7 bits(268) | 0.0 | 57/119(48%) | 0/119(0%) | Minus/Minus |
Query 61 PSLCGDASLWEFGKNGGGIVSPFFYR*NPGVSTCSFDRHRKRKHSYRSYFVDKVFII*PKLWIPVEASSVSTG*RGDCTIRDLVRCRFVSGIKARSDSLAFCRTCLIH*LFDFCEIVTF 417 P LCGDASLWEF K+ VSPFF R +PG+S CSF+ H KH YRS F+DKVF++ P+L +P+EA SV R + TI + + R V +K SD +F L H DF E+ F Subject 1059 PGLCGDASLWEFAKDCSRTVSPFFNREDPGISACSFNGHG**KHCYRSDFIDKVFVVQPELGVPMEAGSVGARGRRNRTIGNGI*FRLVRRVKDGSDPFSFRSFSLFHQFVDFFEVTGF 1415
Range 5: 1470 to 1571 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
45.1 bits(92) | 0.0 | 20/34(59%) | 0/34(0%) | Minus/Minus |
Query 472 SPVLFDW*WSLDCGLYISKS*PCDVSQRVRFFIP 573 S +LF WS DC LYI S* DVSQ +RF IP Subject 1470 STILFHGRWSFDCSLYIP*S*ASDVSQGIRFSIP 1571
Range 6: 1108 to 1572 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
133.0 bits(284) | 0.0 | 74/155(48%) | 0/155(0%) | Minus/Minus |
Query 110 KSRIVRLVMES*LRLVYIEVVTL*C*SKSQILYTKWIVYVTGE*TIGGGERVPKFVWGR*PLGVWQKRRRYCQSVFLPVEPRRKYL*FRSA*KEKT*LQKLLR*QSFHNLTKVVDPSGGELRKHRLTR*LYHQRSCKMSVRKRDQSEE*FARVLQ 574 K IV ME *L+LVY +V+ *C*S QI YTKW Y E*T GGER +FVWGR*PLGV ++ ++ CQSVF P PR K L*F+ A KT LQK L *QSF + +V P+GG LR+ + + H++ + + Q E* V Q Subject 1108 KYHIVPREMEF*LQLVYTVIVSQ*C*SGHQIQYTKWTAY*MVE*TTAGGERESRFVWGR*PLGVCKRLQQNCQSVFQPGGPRHKCL*FQRAWIMKTLLQKRLH*QSFRSPARVGGPNGGGLRRRQGKKKQNHRKWYMIQACTQSQGWE*SFLVSQ 1572
Range 7: 1315 to 1563 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
84.0 bits(177) | 0.0 | 49/83(59%) | 0/83(0%) | Plus/Plus |
Query 317 QVLTPGFYR*KNGLTIPPPFLPNSQRLASPHKLGYXXXXXXXXXXXYIDDPLGIKNLTL*LTSQGYDFDIYKPQSRLHHQSNN 565 Q L PG R KNGLT+ NSQRLASPHK G+SLSS +RLL + PLGI NL *LTS YD+ IYK QS+LH NN Subject 1315 QALMPGSSRLKNGLTVLLQSFANSQRLASPHKPGFSLSSCSRLLYHLVGGPLGILNLMP*LTSLAYDYGIYKLQSKLHLPWNN 1563
Botryosphaeria dothidea partitivirus 1 isolate LW 1 segment RNA 2 putative coat protein (CP) gene, complete cds
Sequence ID: KF688741.1 Length: 1623 Number of Matches: 3
Range 1: 1024 to 1530 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
254.2 bits(555) | 0.0 | 109/169(64%) | 0/169(0%) | Plus/Plus |
Query 67 DYLTEVEQLMDQARSAKRERITPRFDPAYEPTSYKISDGTITSSTGAYGARLHWDPQLWLDYENFVNEVASVAMFSLSMPIETTGTYAWVLPVEKRTDNTSAVFAKLPKASVPTQTWVXXXXXXXXXXXXHRRSTWYKESDSLTNITGLRLRYIQAAIKTPSPVEQYGT 573 DY E+E+L ++AR K++ TPRFD +Y+ +SY +SDGTIT+ GAYGARLHWDPQLWL YE V EV+SVAMFSL+MP+ETTGTYAW+LPVEKR + + V+A++PKAS+P TWVL+LLLQSSTLP RST++ E+D L+N+ GLR RYI AA+KTP P+EQYGT Subject 1024 DYAEEIEELFERARGLKKQMTTPRFDVSYQSSSYVVSDGTITADPGAYGARLHWDPQLWLQYEQLVEEVSSVAMFSLAMPVETTGTYAWILPVEKRHGDDATVYARMPKASIPPATWVLSLLLQSSTLPEDLRSTFFTETDGLSNVLGLRQRYINAAVKTPPPIEQYGT 1530
Range 2: 1059 to 1529 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
139.0 bits(297) | 0.0 | 78/157(50%) | 0/157(0%) | Minus/Minus |
Query 102 VPYCSTGDGVLIAACIYRSRNPVMLVKESDSLYQVDRLCNGRVDDWRRRASTQVCVGTLAFGSLAKTAEVLSVRFSTGRTQA*VPVVSIGIERENIATEATSLTKFS*SNQSCGSQWRRAP*APVDEVIVPSEIL*DVGS*AGSKRGVIRSRFAERA 572 VPYCS G GV AA + R R P + S S+ VD +GRV+D +R T V G AFG A T RFSTG QA VPVVS GI ENIAT TS T S +QS GSQW RAP AP VIVPS+ *D * S RGV+ + RA Subject 1059 VPYCSIGGGVFTAALM*RWRRPRTFERPSVSVKNVDLRSSGRVEDCNKRERTHVAGGIDAFGMRA*TVASSPCRFSTGSIQAYVPVVSTGIANENIATLETSSTNCSYCSQSWGSQWSRAPYAPGSAVIVPSDTT*DED**ETSNRGVVICFLSPRA 1529
Range 3: 1006 to 1320 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
63.4 bits(132) | 0.0 | 32/105(30%) | 0/105(0%) | Minus/Minus |
Query 49 IVSPFFYR*NPGVSTCSFDRHRKRKHSYRSYFVDKVFII*PKLWIPVEASSVSTG*RGDCTIRDLVRCRFVSGIKARSDSLAFCRTCLIH*LFDFCEIVTFEFVT 363 I PFF R P + FD H + +H F++ + ++ P+L +P+E+ +V G GDC++ V R + IK S L C DF +V + F T Subject 1006 ITVPFFDREYPSICAGCFDGHCQ*EHCNARDFLN*LLVLQPELGVPMESGTVCAGIGGDCSVGHDVGRRLIGNIKPWSGHLLLESACAFEKFLDFLSVVLWTFET 1320
Nucleotide Sequence (563 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
389.6 | 1570.9 | 44% | 1.721e-106 | 62% | KY352402.1 | |
336.0 | 1051.4 | 34% | 2.366e-90 | 39% | KF688740.1 |
Alignments
Alternaria alternata partitivirus 1 isolate Avi1 segment RNA1, complete sequence
Sequence ID: KY352402.1 Length: 1833 Number of Matches: 7
Range 1: 197 to 715 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
389.6 bits(844) | 0.0 | 155/173(90%) | 0/173(0%) | Plus/Plus |
Query 39 PSVTKSFIAKAPLSTYSKPEYTLECTETMQYLGKMDHYPFNNSVPKFDSWFRSVLKSKAPNVVLHLEETYLRDPCTPDRVMKFMKLFDRRWKRMPTGRLMTEAKQIVSEMFSAVGKVEPIDFNFAGWHEILPHLDMSSSPGLPLRREYATQGECLGHIYDKTKRLNHIAKPKH 557 PSVT SFIAKAPLSTYSKPEYTLECTETMQYLGKMDHY FNNSVPKFD WFR VLKSKAP+VVLHLEETY RDPCTP+RVMKFMKLFDRRWKRMPTG +M +AK+IVSEMFS VGKV+PIDFN+AGWHEILPHLDMSSSPGLPLRREYATQGECLGHIYDKTKRLNH AK H Subject 197 PSVTTSFIAKAPLSTYSKPEYTLECTETMQYLGKMDHYAFNNSVPKFDPWFRHVLKSKAPDVVLHLEETYQRDPCTPERVMKFMKLFDRRWKRMPTGNVMKQAKEIVSEMFSKVGKVDPIDFNYAGWHEILPHLDMSSSPGLPLRREYATQGECLGHIYDKTKRLNHFAKFLH 715
Range 2: 184 to 702 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
319.1 bits(690) | 0.0 | 143/173(83%) | 0/173(0%) | Minus/Minus |
Query 26 AIWLRRLVLS*I*PRHSPCVAYSRRRGRPGEEDMSRWGSISCQPAKLKSMGSTFPTAENISLTICFASVISLPVGILFHRRSKSFMNFMTRSGVQGSRRYVSSKWRTTFGALDLRTLRNQESNFGTELLNG*WSIFPKYCMVSVHSRVYSGLE*VLSGAFAMKLFVTLGCSKA 544 A WLRR VLS*I PRHSPCVAYSRRRGRPGEEDMSR GSISCQPA LKS+GST PT ENISLTI FA I+LPVG+ FHRRSKSFMNFMTRSGVQGSR YVSS+WRTT GALDLRT RNQ SN GT LL * SIFP+YCMVSVHSRVYSGLE*VLSGAFA+KL VTLG + A Subject 184 AKWLRRFVLS*IWPRHSPCVAYSRRRGRPGEEDMSR*GSISCQPA*LKSIGSTLPTLENISLTISFACFITLPVGMRFHRRSKSFMNFMTRSGVQGSR*YVSSRWRTTSGALDLRT*RNQGSNLGTLLLKA**SIFPRYCMVSVHSRVYSGLE*VLSGAFAIKLVVTLGATVA 702
Range 3: 197 to 718 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
282.4 bits(610) | 0.0 | 117/174(67%) | 0/174(0%) | Minus/Minus |
Query 39 GVFGLSDMVETFSLVIDMTKTFALCRVFSTERKTGRRGHVQMG*YFVPAGEVEVDGFDFSNCRKHLTYYLFCLCHKSAGWHPFPPSIKKFHELHDSVGGAGVAKVRLLQVEDDVWCFGLEDAAKPRIKFRDRIVERIMVHLS*ILHGLSALKGVLRLRVSAKRSFCDEAFRNTR 560 GV L ++VE F L+IDM KTFALCRVFS+E K GRRGHV+M YFVPA +EVD DF++ KHLTYYLFCL H A H PP+IKKFHELHDS GAGVA +R L+VED+VWCFGLE+ +PRI+F + I+E IM+HLS +LHGLSAL GVLRLRVSAKRSFCD+ R+TR Subject 197 GVEELCEVVEAFCLIIDMAKTFALCRVFSSEGKAGRRGHVEMRKYFVPASVIEVDRIDFADFGKHLTYYLFCLLHHIASRHALPPTIKKFHELHDSFRGAGVALIRFLKVEDNVWCFGLENVTEPRIEFGNTIIESIMIHLSKVLHGLSAL*GVLRLRVSAKRSFCDKTSRHTR 718
Range 4: 184 to 702 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
230.6 bits(497) | 0.0 | 113/173(65%) | 0/173(0%) | Plus/Plus |
Query 26 GFRATECYEKLHRKSSA*HLL*A*VHP*VH*DHAIFRKDGPLSVQQFCPEI*FLVSQRPQVQSTKRRPPLGGDVPSRPLHPRPSHEVHETF*STVEKDANRQTYDRGKTDSK*DVFCSWKSRTHRLQLRRLARNTTPSGHVLFSRSSSPSRIRDTRRMSWSYL*QD*TSQPYR 544 G+R TEC + +RKSSA*HLL*A*VHP VH*DHA+ KDG L Q C +I LV R QVQST+R PP G+V +RPLHP SHEVHETF*S+VE A Q + GK DSK*DVF S +SR++RLQLR LARNT+ S HVLFSR S P+RIRDT RMSW YL* D T QP R Subject 184 GYRRTECDD*FYRKSSA*HLL*A*VHPRVH*DHAVPWKDGSLCFQ**CSQIRSLVPSRSQVQSTRRCPPP*GNVSTRPLHP*TSHEVHETF*SSVEAHAYWQCDEAGKRDSK*DVFQSRQSRSYRLQLRWLARNTSSSRHVLFSRPSPPTRIRDTGRMSWPYL**DKTPQPLR 702
Range 5: 183 to 548 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
143.6 bits(307) | 0.0 | 80/122(66%) | 0/122(0%) | Minus/Minus |
Query 25 RLFQLQKTSHXXXXXXXXXVCRLASFSTVDQKVS*TS*LGRGCRGREGTSPPSGGRRLVLWT*GRCETKNQISGQNC*TDNGPSFLNIAWSQCTQGCTQA*SKC*AELLR*SFS*HSVARKP 390 RL +L KTSHLLS+LP S C+ A ST DQKVS*TS*L +GCRGR T P GG+RLVLWT* R TK++I * N PSF AWSQCT GCTQA*SKC*AELLR*+ S HSV R P Subject 183 RLCRLWKTSHLLSLLPASSHCQ*ACASTDDQKVS*TS*LVQGCRGRVDTFPQGGGQRLVLWT*ERDGTKDRIWEHYY*KHNDPSFQGTAWSQCTLGCTQA*SKC*AELLR*N*SSHSVRR*P 548
Range 6: 576 to 701 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
60.6 bits(126) | 0.0 | 30/42(71%) | 0/42(0%) | Minus/Minus |
Query 418 RYG*DV*SCHRYDQDIRLVSRILDGEEDREKRTCPDGVVFRA 543 R G* V S HRY QDIR VSRIL G E REKRTC D VFRA Subject 576 RSG*GVLSYHRYGQDIRPVSRILVGGEGREKRTCRDEEVFRA 701
Range 7: 282 to 719 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.9 bits(310) | 0.0 | 91/146(62%) | 0/146(0%) | Plus/Plus |
Query 124 CNI*ERWTIIRSTILSRNLILGFAAXXXXXXXXXXXTWRRRTFATPAPPTEXXXXXNFLIDGGKGCQPADL*QRQNR**VRCFLQLEKSNPSTSTSPAGTKYYPIWTCPLLPVFLSVENTRHKANVLVISMTRLNVSTISLSPNTP 561 C+ ERW I+ S I+ N ILG SSPKHQT SST R+R ATPAP ES*SS*NFLI GG C A * RQ R**VRCF + KS STS + AGTKY+ I TCPLLP F S ENTRH+ANVL ISM R N ST S S +TP Subject 282 CSTLERWIIMLSIIVFPNSILGSVTFSSPKHQTLSSTLRKRINATPAPLNES*SS*NFLIVGGSACLLAM**SRQKR**VRCFPKSAKSILSTSITLAGTKYFLISTCPLLPAFPSDENTRHRANVLAISMIRQNASTTSQSSSTP 719
Botryosphaeria dothidea partitivirus 1 isolate LW 1 segment RNA 1 putative RNA dependent RNA polymerase (RdRp) gene, complete cds
Sequence ID: KF688740.1 Length: 1823 Number of Matches: 8
Range 1: 197 to 715 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
336.0 bits(727) | 0.0 | 129/173(75%) | 0/173(0%) | Plus/Plus |
Query 39 PSVTKSFIAKAPLSTYSKPEYTLECTETMQYLGKMDHYPFNNSVPKFDSWFRSVLKSKAPNVVLHLEETYLRDPCTPDRVMKFMKLFDRRWKRMPTGRLMTEAKQIVSEMFSAVGKVEPIDFNFAGWHEILPHLDMSSSPGLPLRREYATQGECLGHIYDKTKRLNHIAKPKH 557 P VT FIAKAPL Y YTLECT TMQY+G+MD YPF++S+P+FD WFR VLK++AP+V LHLE+TY RDPCTPDRVM F+KLFDR WKR PTGRLM++A+ IV +MF VG+V PIDFN+AGWHEILPHLDMSSSPGLPLRREYATQGECLGHIYDK+KRLNH AK H Subject 197 PKVTDKFIAKAPLEDYPDKRYTLECTSTMQYIGQMDAYPFHSSIPEFDPWFRHVLKARAPDVSLHLEQTYTRDPCTPDRVMSFLKLFDRTWKRKPTGRLMSQAESIVKKMFKCVGQVNPIDFNYAGWHEILPHLDMSSSPGLPLRREYATQGECLGHIYDKSKRLNHFAKFLH 715
Range 2: 259 to 714 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
212.8 bits(458) | 0.0 | 101/152(66%) | 0/152(0%) | Minus/Minus |
Query 101 CLGLAIWLRRLVLS*I*PRHSPCVAYSRRRGRPGEEDMSRWGSISCQPAKLKSMGSTFPTAENISLTICFASVISLPVGILFHRRSKSFMNFMTRSGVQGSRRYVSSKWRTTFGALDLRTLRNQESNFGTELLNG*WSIFPKYCMVSVHSRV 556 C A WLRRL+LS*I*PRHSPCVAYSRRRG+PG+EDMSR G ISC PA LKSMG T PT NI LTI A +S PVG LF RSKSF MTRSGVQGSR V S+WR T GA L T RN SN G E NG SI+P YC+V VHS V Subject 259 CRNFAKWLRRLLLS*I*PRHSPCVAYSRRRGKPGDEDMSR*GRISCHPA*LKSMGLTCPTHLNIFLTIDSACDMSRPVGFLFQVRSKSFKKLMTRSGVQGSRV*VCSRWRETSGARALSTWRNHGSNSGIEEWNGYASIWPMYCIVLVHSSV 714
Range 3: 197 to 718 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
172.9 bits(371) | 0.0 | 82/174(47%) | 0/174(0%) | Minus/Minus |
Query 39 GVFGLSDMVETFSLVIDMTKTFALCRVFSTERKTGRRGHVQMG*YFVPAGEVEVDGFDFSNCRKHLTYYLFCLCHKSAGWHPFPPSIKKFHELHDSVGGAGVAKVRLLQVEDDVWCFGLEDAAKPRIKFRDRIVERIMVHLS*ILHGLSALKGVLRLRVSAKRSFCDEAFRNTR 560 GV ++VETF+LVIDMT+ FALC + +TER TG GHV+M FVP+ V+V+G D SN +HL L H+S+ W PFP ++K+F E HD+VG AGV+ V L Q+E D+W G E A+P IKFRD +E I +HL+ +LH + V +RV R F +E N R Subject 197 GV*EFCEVVETFALVIDMTEAFALCCILTTER*TG**GHVEMRKDFVPSSVVKVNGVDLSNAFEHLLDNRLSL*HESSSWFPFPSTVKEF*ETHDAVGCAGVSSVGLFQMEGDIWGTGFEHMAEPWIKFRD*GMEWICIHLANVLHRAGTFERVALVRVIF*RRFRNEFVGNLR 718
Range 4: 187 to 702 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
116.1 bits(247) | 0.0 | 67/172(39%) | 0/172(0%) | Plus/Plus |
Query 29 FRATECYEKLHRKSSA*HLL*A*VHP*VH*DHAIFRKDGPLSVQQFCPEI*FLVSQRPQVQSTKRRPPLGGDVPSRPLHPRPSHEVHETF*STVEKDANRQTYDRGKTDSK*DVFCSWKSRTHRLQLRRLARNTTPSGHVLFSRSSSPSRIRDTRRMSWSYL*QD*TSQPYR 544 F E Y ++H +S+ L * +H ++ A+ +G +S+ P I* +V Q + PP G ++ SRPLH RP HE +T * +EK+ N T+ + DV W S+ H L LR +ARN + S HVL +R +SPS + +TRRM SYL*Q+ TSQP R Subject 187 FGCPEGYRQIHCESAVRRLP*QALHARMYQHDAVHWPNGCISIPFLNPGI*SMVPPCAQSPCPRCLPPSGTNLHSRPLHTRPRHEFLKTL*PYLEKETNWTTHVTS*VYCQEDVQMRWTSQPH*L*LRWMARNPSSSRHVLITRFTSPS*VCNTRRMPRSYL*QEQTSQPLR 702
Range 5: 522 to 719 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.0 bits(164) | 0.0 | 37/66(56%) | 0/66(0%) | Plus/Plus |
Query 364 RCFLQLEKSNPSTSTSPAGTKYYPIWTCPLLPVFLSVENTRHKANVLVISMTRLNVSTISLSPNTP 561 RC L+KS P T T+ GTK + I TCP PV+LSV + +HKAN VISMTR NVST S + TP Subject 522 RCSNALDKSTPLTLTTLDGTKSFLISTCPHHPVYLSVVSMQHKANASVISMTRANVSTTSQNSYTP 719
Range 6: 282 to 491 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
39.1 bits(79) | 0.0 | 34/70(49%) | 0/70(0%) | Plus/Plus |
Query 124 CNI*ERWTIIRSTILSRNLILGFAAXXXXXXXXXXXTWRRRTFATPAPPTEXXXXXNFLIDGGKGCQPAD 333 C+ +W I S SRNLI G A S P Q S S W + T TPA PT S* S*N L GKG Q D Subject 282 CSTLAKWMHIHSIPQSRNLIHGSAMCSKPVPQMSPSIWNKPTLETPAHPTAS*VS*NSLTVLGKGNQLDD 491
Range 7: 537 to 701 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
56.5 bits(117) | 0.0 | 33/55(60%) | 0/55(0%) | Minus/Minus |
Query 379 RYG*DV*SCHRYDQDIRLVSRILDGEEDREKRTCPDGVVFRAXXXXXXRWVRLFQ 543 R G*DV SCHRYD+ IRLV DGE +R RTC D FRA +RS*S+W L Q Subject 537 RSG*DVCSCHRYDRGIRLVLHTHDGEVNRVMRTCRDEEGFRAIQRS*SQWG*LVQ 701
Nucleotide Sequence (396 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
252.0 | 893.8 | 22% | 2.65e-65 | 55% | KY352403.1 | |
192.7 | 442.0 | 22% | 1.911e-47 | 36% | KF688741.1 |
Alignments
Alternaria alternata partitivirus 1 isolate Avi1 segment RNA2, complete sequence
Sequence ID: KY352403.1 Length: 1680 Number of Matches: 9
Range 1: 462 to 851 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
252.0 bits(546) | 0.0 | 111/130(85%) | 0/130(0%) | Plus/Plus |
Query 1 LYQRMENVKFDALGIKPPAPNRIPLPRNLRVFQPLWSILANIGTVDDDELGVQYIPDAVXXXXXXXXXXHDIEGLLSCTLYDWKSSWNSVLAARTTRPSYEQRDGYRTTLDSNESPALKKEELIKRISQA 390 LYQR+ENVKFDALG+KP APNRIPLPRNLRVFQP+WSILANIGTVDDDEL QYIPDAVLPDSDDLDS HDIEGLLSCTLYDWKSSWNSVLAAR TRPSY+ RDGYRTTL+SNE+P +KK++LI+RI+ A Subject 462 LYQRIENVKFDALGVKPAAPNRIPLPRNLRVFQPIWSILANIGTVDDDELRAQYIPDAVLPDSDDLDSEHDIEGLLSCTLYDWKSSWNSVLAARETRPSYQHRDGYRTTLESNEAPEVKKQDLIRRIATA 851
Range 2: 464 to 625 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
95.9 bits(203) | 0.0 | 43/54(80%) | 0/54(0%) | Minus/Minus |
Query 3 MYWTPSSSSSTVPMFARIDQRG*KTRRFLGSGIRFGAGGLIPSASNLTFSIRWY 164 +Y SSSSSTVPMFARIDQ G KTRRFLGSGIRFGA G P+ASNLTFSIR Y Subject 464 IY*ARSSSSSTVPMFARIDQMGWKTRRFLGSGIRFGAAGFTPNASNLTFSIR*Y 625
Range 3: 689 to 850 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
88.6 bits(187) | 0.0 | 40/54(74%) | 0/54(0%) | Minus/Minus |
Query 228 ACEIRLISSSFFKAGDSLESRVVR*PSRCSYEGRVVRAARTEFHEDFQSYRVQL 389 A IRLI S F +G S +S VVR*PSRC YEGRV RAARTEF EDFQSYRVQL Subject 689 AVAIRLIKSCFLTSGASFDSSVVR*PSRCWYEGRVSRAARTEFQEDFQSYRVQL 850
Range 4: 463 to 780 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
127.5 bits(272) | 0.0 | 59/106(56%) | 0/106(0%) | Minus/Minus |
Query 2 GNHHVVHTRDGWCERQGQNSTRTSSHTEYNLEVPQYHEGNLDRQNQVERHPVCTGHQVHHHLRFLCSRELTRGAERHGGFWEAGFDSGQEV*FQVHQI*HSPYVGT 319 GNHH V TRDG+ +QG NS RTSS TEYN +YH N DR+NQ E+ V T VHHH ++LC RELTR A RHGGF A +DS Q+V HQ * YV T Subject 463 GNHHGVGTRDGFLGQQGLNSRRTSSRTEYN*VDLRYHVRNPDRRNQEEQRQVYTERAVHHHRQYLCLRELTRWAGRHGGFSGAEYDSEQQVSRPTHQT*RFQYVDT 780
Range 5: 462 to 626 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
74.4 bits(156) | 0.0 | 30/55(55%) | 0/55(0%) | Minus/Minus |
Query 1 YVLDTKFIIIYGSYVREN*PEGLKDTEVSGKRDSIRGRRFNSKCIKFDILHTLVQ 165 Y+L +FIII +YV EN*P+GL+DTEVS +R++IR RF+++ IK D+ +TL+Q Subject 462 YILSAQFIIIDSTYVCEN*PDGLEDTEVSRERNTIRSSRFHAQRIKLDVFNTLIQ 626
Range 6: 690 to 794 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
49.6 bits(102) | 0.0 | 20/35(57%) | 0/35(0%) | Minus/Minus |
Query 229 IESGPVTITLFIRGTGGASGKDRIPRGLPVIQSTT 333 ++ VTIT+ +RGTG + KD IP GLPV+QSTT Subject 690 LKCSTVTITVLVRGTGFSGSKD*IPGGLPVVQSTT 794
Range 7: 463 to 780 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
97.3 bits(206) | 0.0 | 62/106(58%) | 0/106(0%) | Plus/Plus |
Query 2 CTNVWRMSNLMHLELNLLPRIESRFPETSVSFSPSGQFSRT*EP*MMMNLVSSTYRMPFYXXXXXXXXXXXXRDF*VVLCMTGSPRGILSLPLAPPVPRMNNVMVT 319 C NV + S+LM NLL RI R ETSVS SPSGQFS+T* MMMN S Y F+LI TI IP MI + + VVLC TGSP GI SL PVPR N VMVT Subject 463 CINVLKTSSLMRWA*NLLLRIVFRSRETSVSSSPSGQFSQT*VLSMMMNCALSIYLTLFFLIPTIWIPNMISKVYLVVLCTTGSPPGIQSLLPEKPVPRTNTVMVT 780
Range 8: 464 to 628 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
60.6 bits(126) | 0.0 | 31/55(56%) | 0/55(0%) | Plus/Plus |
Query 3 VPTYGECQI*CTWN*TSCPESNPASQKPPCLSAPLVNSREHRNRR***TWCPVHT 167 V TY + Q+*C T C ES A +KPPCL A LVNSR+HR R***T V+T Subject 464 VSTY*KRQV*CVGRETCCSESYSAPEKPPCLPAHLVNSRKHRYCR***TARSVYT 628
Botryosphaeria dothidea partitivirus 1 isolate LW 1 segment RNA 2 putative coat protein (CP) gene, complete cds
Sequence ID: KF688741.1 Length: 1623 Number of Matches: 7
Range 1: 427 to 774 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
192.7 bits(416) | 0.0 | 85/116(73%) | 0/116(0%) | Plus/Plus |
Query 1 LYQRMENVKFDALGIKPPAPNRIPLPRNLRVFQPLWSILANIGTVDDDELGVQYIPDAVXXXXXXXXXXHDIEGLLSCTLYDWKSSWNSVLAARTTRPSYEQRDGYRTTLDSNESP 348 LYQR+E VKFD+LGIKP AP RIPLPRNLRVF P+WS+LANIGTVDDD+L V YIPD +LPDSDDLDS HD+EGLL+CTLYDWKSSW VL AR RP+Y+ RDGY NE+P Subject 427 LYQRIEAVKFDSLGIKPSAPTRIPLPRNLRVFPPIWSVLANIGTVDDDDLRVVYIPDGILPDSDDLDSEHDVEGLLNCTLYDWKSSWEDVLTARKNRPAYQARDGYDGNQTGNETP 774
Range 2: 429 to 581 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.0 bits(166) | 0.0 | 36/51(71%) | 0/51(0%) | Minus/Minus |
Query 3 TPSSSSSTVPMFARIDQRG*KTRRFLGSGIRFGAGGLIPSASNLTFSIRWY 155 T SSSSTVPM AR DQ G TRRF G GI GA GLIP SNLT SIRWY Subject 429 TRRSSSSTVPMLARTDQMGGNTRRFRGKGILVGAEGLIPRESNLTASIRWY 581
Range 3: 657 to 743 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
35.9 bits(72) | 0.0 | 18/29(62%) | 0/29(0%) | Minus/Minus |
Query 231 *PSRCSYEGRVVRAARTEFHEDFQSYRVQ 317 *PSR GR +RA RT EDFQS RVQ Subject 657 *PSRA**AGRFLRAVRTSSQEDFQS*RVQ 743
Range 4: 429 to 590 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
41.4 bits(84) | 0.0 | 21/54(39%) | 0/54(0%) | Plus/Plus |
Query 3 VPTYGECQI*CTWN*TSCPESNPASQKPPCLSAPLVNSREHRNRR***TWCPVH 164 VPT CQ+* +W+ + N + KP C+ LV SR+H + R*** +H Subject 429 VPTD*SCQV*FSWDQALRSDKNTLAPKPSCVPTHLVRSRQHWHGR***PPSRLH 590
Range 5: 645 to 743 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
27.2 bits(53) | 0.0 | 12/33(36%) | 0/33(0%) | Plus/Plus |
Query 219 GTSKLYSV*LEVLVEFCPCRSHHPSLV*TT*WL 317 GT++L+S+ LE+ + CP R S + ++ WL Subject 645 GTAELHSLRLEIFLGRCPDRP*ESSCLSSSRWL 743
Nucleotide Sequence (841 letters)
Query ID: | ds2016-58_48 |
Query definition: | No definition line |
Query length: | 589 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
583.0 | 2360.8 | 44% | 1.81e-164 | 46% | KY352402.1 | |
270.5 | 1023.5 | 19% | 2.932e-127 | 34% | KF688740.1 | |
56.5 | 103.9 | 17% | 1.604e-14 | 29% | JX658570.1 | |
48.7 | 126.9 | 22% | 3.078e-16 | 25% | KX884238.1 | |
48.7 | 126.9 | 22% | 3.078e-16 | 25% | NC_032131.1 |
Alignments
Alternaria alternata partitivirus 1 isolate Avi1 segment RNA1, complete sequence
Sequence ID: KY352402.1 Length: 1833 Number of Matches: 10
Range 1: 824 to 1657 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
583.0 bits(1266) | 0.0 | 255/278(92%) | 0/278(0%) | Plus/Plus |
Query 7 AEVKVMEMRYCIPLVKRFSDMFGKTPYPVGRNMTKALPFIIDNLLDDKKFGLVTDISKLDTSVGPDWIDWAFSQLKSFFDMGMTASSETRNSHVFDFLHYYFKRTPILLPSGQLIKKAGGVPSGSGFXXXXXXXXXXXXXXYSRLRMGHKKPDIIKMFVVGDDMATSDDHDFSIEEFSHYMSQLGFEINPSKVMFSDKGIELKFLGYSKRGGGLYRPIEELLQTAFFPEKYVGNPNRSRQRILGQSIAAGLSNSFFDKCNYWMEELVTLTSTLDPDEV 840 AEVKV+EMRYCIPL+KRFS+MFGKTPYPVGRNMTKALPFIID+LL DKKFGLVTDISKLDTSVGPDWIDWAFSQLKSFFD G T SSE R+S+VFDFLH+YFKRTPILLPSGQL+KKAGGVPSGSGFTQLVDTLVTTLAT YSRLRMGH K I KMFVVGDDMATS DHDFSIEEFSH M QLGFEINPSKVMFS+KGIELKFLGYSKRGGGLYRPIEELLQTAFFPEKYVGNPNRSRQRILGQSIAAGLSNSFFDKCNYWMEELVTL+STLDPDEV Subject 824 AEVKVIEMRYCIPLMKRFSEMFGKTPYPVGRNMTKALPFIIDHLLQDKKFGLVTDISKLDTSVGPDWIDWAFSQLKSFFDFGFTLSSERRDSNVFDFLHFYFKRTPILLPSGQLVKKAGGVPSGSGFTQLVDTLVTTLATVYSRLRMGHTKDQIFKMFVVGDDMATSVDHDFSIEEFSHIMGQLGFEINPSKVMFSNKGIELKFLGYSKRGGGLYRPIEELLQTAFFPEKYVGNPNRSRQRILGQSIAAGLSNSFFDKCNYWMEELVTLSSTLDPDEV 1657
Range 2: 823 to 1422 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
333.3 bits(721) | 0.0 | 155/200(78%) | 0/200(0%) | Minus/Minus |
Query 6 MPLSENMTLEGLISKPSWLI**ENSSIEKSWSSDVAISSPTTNILIMSGFLCPIRKRE*SVANVVTRVSTSWVKPEPEGTPPAFLIN*PEGKRIGVRLK***RKSKTCELRVSDEAVMPMSKNDLSCEKAQSIQSGPTDVSSLLISVTRPNFLSSSRLSIMKGSALVILRPTG*GVLPNMSEKRLTKGMQ*RISMTLTSA 605 MPL ENMTLEG ISKPSW + ENSSIEKSWS+DVAISSPTTNIL + F+ PI +RE*+VANVVTRVSTSWVKPEP+GTPPAFL + PEGKRIGVRLK* *RKSKT R SDE+V P SK DLS EKAQSIQSGPT+VSS +SVTRPNFLS R S++KG A VILRPTG*GVLPN+SEKR GMQ*RISMTLTSA Subject 823 MPLLENMTLEGFISKPSWPMMWENSSIEKSWSTDVAISSPTTNILNIWSFV*PILRRE*TVANVVTRVSTSWVKPEPDGTPPAFLTSWPEGKRIGVRLK*K*RKSKTLLSRRSDESVKPKSKKDLS*EKAQSIQSGPTEVSSFEMSVTRPNFLSCKRWSMIKGRAFVILRPTG*GVLPNISEKRFINGMQ*RISMTLTSA 1422
Range 3: 1489 to 1656 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
109.7 bits(233) | 0.0 | 48/56(86%) | 0/56(0%) | Minus/Minus |
Query 672 TSSGSRVLVSVTSSSIQ*LHLSKNELDRPAAMDCPKMR*RERFGFPTYFSGKKAVW 839 TSSGS VL VTSSSIQ*LHLSKNEL+ PAAMD P +R*RERFGFPTYFSGKKAVW Subject 1489 TSSGSNVLERVTSSSIQ*LHLSKNELESPAAMD*PSIR*RERFGFPTYFSGKKAVW 1656
Range 4: 827 to 1654 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
369.5 bits(800) | 0.0 | 170/276(62%) | 0/276(0%) | Minus/Minus |
Query 10 FVRVEGAGECDKLFHPIVTFVEE*VG*TSGDGLSQNALT*TVWVSDILFRKESSLEKFFDGTVKSTTPFGVAEELEFYALVREHDFGRVNFKTELAHIMRKLLD*EIVVVGCCHIVANYKHLNNVGLLVSHT*A*VIRSQCRDKSVNELGKAGTGRNATRLLDQLTRR*ENRCAFEVVMKKVENM*ITSFR*SCHAHVEERLELRESPVNPIWTD*CIKLTDIGDKTEFLIIK*VVNNER*CLSHITTYRVRGLAKHVGKAFN*RYAVAHFHDFDF 837 FVR++ GE +KLFHPIVTFVEE*+G +GL+Q +LT*T+WVS+ILFRKESSLE+F D +K+TT FGV E+LEFYALVREHDFGRV FKTELAH + KLLD EIVV C HIVAN KHL + V+H+ V SQC +KSVNELGK GTGR+AT LLDQL RR*ENRCAF+V +KKVE++ IT F C VEE LELRESP+ PI TD I+ ++ ++ + LI++ +V+++R L HITT RVR AKH+ +AF+* AV H +DFDF Subject 827 FVRIQCTGEGNKLFHPIVTFVEE*IGEPCSNGLTQYSLT*TIWVSNILFRKESSLEEFLDWAIKATTTFGVTEKLEFYALVREHDFGRVYFKTELAHDVGKLLDREIVVDRCGHIVANNKHLEYLVFCVTHSKTRVNSSQCCNKSVNELGKTGTGRDATSLLDQLARR*ENRCAFKVEVKKVEDIAITPF*RKCETEVEEGLELRESPIYPIRTDRGIEF*NVSNEAKLLILQEMVDDKRQSLCHITTDRVRCFAKHLREAFH*WNAVTHLNDFDF 1654
Range 5: 1003 to 1638 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
303.9 bits(657) | 0.0 | 137/212(65%) | 0/212(0%) | Plus/Plus |
Query 186 YISRSRLD*LGFLAAQVVLRHGHDSFI*NS*FTCFRLSSLLLQTHTYSLTFWSIDQEGGWRSFRFRLYPTR*HSCHDIGYGLLTLTYGTQEARHY*DVCSWRRYGNIRRPRFLNRGVFSLYEPARF*N*PFQSHVL*QGHRTQVPRLLQTGWWTLPSHRRTSPDCFLS*KVCRKPKPFTSTHFGTIHRRWSIQLILRQM*LLDGRACHTHQH 821 Y+ RS LD LGFL+AQV+LR +F+ +* C RLSSLLL THTYSLTF QEG WR RFR YPTR*HSC++IGY LL+ G+ + + DVC WRRYG+I RPRFL RGVF + PARF*N PFQSHVL*QGHRTQV RLLQT WW L +R T P+CFLS*KVC KPK FTST+ G+IH ++Q ILRQM*LLDGRAC+ Q+ Subject 1003 YLCRS*LDRLGFLSAQVLLRLRFHTFVRTA**QCLRLSSLLL*THTYSLTFGPTGQEGWWRPVRFRFYPTR*HSCYNIGYCLLSS*NGSHKRPNIQDVCCWRRYGHICRPRFLYRGVFPHHGPARF*NKPFQSHVL*QGHRTQVSRLLQTWWWPLSPNRGTPPNCFLS*KVCWKPKSFTSTNTGSIHCCRALQFILRQM*LLDGRACYPLQY 1638
Range 6: 820 to 945 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
57.9 bits(120) | 0.0 | 25/42(60%) | 0/42(0%) | Plus/Plus |
Query 3 SSGSQSHGNALLHTFS*TLFRHVWQDPLPCRS*YD*GTTFHY 128 SS SQSH +ALLH+ + TL VWQ+ LPCRS*YD G+ F++ Subject 820 SS*SQSH*DALLHSINETLL*DVWQNTLPCRS*YDKGSAFYH 945
Range 7: 1152 to 1634 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
230.6 bits(497) | 0.0 | 107/161(66%) | 0/161(0%) | Minus/Minus |
Query 335 W*V*QALPSNSYICRRMSWIDQRRWIVPKCVDVNGLGFRHTFQERKQSGEVLRWDGKVHHPVWSSRGT*VLCPCQRT*LWKG*FQNRAGSYNEKTPRLRNRGRRMLPYRRQLQTS**CRASCVPYVSVSNP*PMS*QECQRVG*SRNRKERHPPS*SIDQK 817 W *QALPSNSYICRRM+W ++WI P VDVN LGF+HTFQERKQ G V R K HH VWS+R T*VLCPC RT*LWKG FQNRAG KTPR RNRGR+M PYRRQ QTS* C P+ S *PM *QECQRVG*+RNR RH PS* + K Subject 1152 WRG*QALPSNSYICRRMNWRALQQWIDPVFVDVNDLGFQHTFQERKQFGGVPRLGDKGHHHVWSNRET*VLCPC*RT*LWKGLFQNRAGP*CGKTPR*RNRGRQMWPYRRQQQTS*IFGLLCDPF*DESKQ*PML*QECQRVG*NRNRTGRHQPS*PVGPK 1634
Range 8: 819 to 1109 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
76.7 bits(161) | 0.0 | 45/97(46%) | 0/97(0%) | Minus/Minus |
Query 2 RKHVNYEFQMKLSCPCRRTT*AARKPSQSNLDRLMYQAY*YR*QDRISYHQVGCQ**KVVP*SYYDLQGKGSCQTCRKSV*LKVCSSAFP*L*LPLD 292 R+H + K+ RR T*A RKP+ SN DR Y+ +*+ + SY +**K P SYYD QGK CQT ++SV L CS+A *L*L LD Subject 819 RRHCYHAVLTKV*NRSRRRT*AERKPNLSNQDRQRYRVLKCQ*RGQTSYPARDGR**KAEPLSYYDRQGKVFCQTSQRSVSLMECSNASQ*L*LQLD 1109
Range 9: 1092 to 1658 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
255.8 bits(552) | 0.0 | 123/189(65%) | 0/189(0%) | Plus/Plus |
Query 275 VIHMFSTFFITTSNAHLFSYLLVN*SRRRVAFLPVPALPNSLTLLSRHWLRITHAYVWDTRSPTLLRCL*LATIWQHPTTTISQSRSFLII*ASSVLKLTLPKSCSLTRA*NSSSSATPNGVVDFTVPSKNFSRLLSFLKSMSETQTVHVNAFWDNPSPLVYPTHSSTNVTIGWKSLSHSPAPSTRTKY 841 VI M STFF +T NAHLFSYL N SRR VA PVP LPNSLTLL +HWL T W T+ RCL LATIW H +TTIS SRSF ASSVLK TLPKSCSLTRA*NSS S TPN VV F S+N S+LLSFLKSM ETQ VHVN +W NP P HSSTNVTIGWKSL SP TK+ Subject 1092 VIAMSSTFFTSTLNAHLFSYLRANWSRRLVASRPVPVLPNSLTLLLQHWLLFTLVLEWVTQKTKYSRCLLLATIWPHLSTTISLSRSFPTSWASSVLK*TLPKSCSLTRA*NSSFSVTPNVVVAFIAQSRNSSKLLSFLKSMLETQIVHVNEYWVNPLLQGSPIHSSTNVTIGWKSLLPSPVHWILTKF 1658
Botryosphaeria dothidea partitivirus 1 isolate LW 1 segment RNA 1 putative RNA dependent RNA polymerase (RdRp) gene, complete cds
Sequence ID: KF688740.1 Length: 1823 Number of Matches: 8
Range 1: 824 to 1288 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
270.5 bits(584) | 0.0 | 120/155(77%) | 0/155(0%) | Plus/Plus |
Query 7 AEVKVMEMRYCIPLVKRFSDMFGKTPYPVGRNMTKALPFIIDNLLDDKKFGLVTDISKLDTSVGPDWIDWAFSQLKSFFDMGMTASSETRNSHVFDFLHYYFKRTPILLPSGQLIKKAGGVPSGSGFXXXXXXXXXXXXXXYSRLRMGHKKPDII 471 AEVKV+EMRY IPL++RF FGK PYPVG N+TKALPFIID+LL+D K G VTD+SKLDTSVGPDWIDWAFS LK F+ MGMT SSETRNSHVFDFLHYYFKRTPIL PSGQL++K+GGVPSGSGFTQ+VDTL T L T YS LRMG+++ DII Subject 824 AEVKVIEMRYVIPLLERFKSQFGKIPYPVGVNLTKALPFIIDHLLNDGKHGFVTDVSKLDTSVGPDWIDWAFSFLKDFYYMGMTESSETRNSHVFDFLHYYFKRTPILFPSGQLVRKSGGVPSGSGFTQIVDTLCTLLMTTYSMLRMGYQEDDII 1288
Range 2: 1292 to 1660 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
210.5 bits(453) | 0.0 | 85/123(69%) | 0/123(0%) | Plus/Plus |
Query 472 KMFVVGDDMATSDDHDFSIEEFSHYMSQLGFEINPSKVMFSDKGIELKFLGYSKRGGGLYRPIEELLQTAFFPEKYVGNPNRSRQRILGQSIAAGLSNSFFDKCNYWMEELVTLTSTLDPDEV 840 K+F VGDDMATS F +E+FS Y+ QLGFEIN KVMFS++GIELKFLGYSK GG ++RPI+ELLQTA+FPEKYVGNP RSRQRILGQ++A+GL+N F K NYWMEEL + + LD DEV Subject 1292 KIFAVGDDMATSVPSSFDVEQFSFYVGQLGFEINVDKVMFSNRGIELKFLGYSKYGGNIWRPIDELLQTAYFPEKYVGNPERSRQRILGQTLASGLTNGFLSKVNYWMEELCSWHTELDTDEV 1660
Range 3: 823 to 1287 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
185.7 bits(399) | 0.0 | 96/155(62%) | 0/155(0%) | Minus/Minus |
Query 6 IMSGFLCPIRKRE*SVANVVTRVSTSWVKPEPEGTPPAFLIN*PEGKRIGVRLK***RKSKTCELRVSDEAVMPMSKNDLSCEKAQSIQSGPTDVSSLLISVTRPNFLSSSRLSIMKGSALVILRPTG*GVLPNMSEKRLTKGMQ*RISMTLTSA 470 IMS PI E* V V VST WVKP+PEGTPP F + PEGKRIGVRLK** +KSKT ELRVS ++VMPM L E AQSIQSGPTDVS+ SVT+P F S ++ S+MKG ALV L PTG G+ PN KR +GM *RIS+TLTSA Subject 823 IMSSSW*PILSIE*VVIKSVQSVSTIWVKPDPEGTPPDFRTSCPEGKRIGVRLK**CKKSKTWELRVSLDSVMPM**KSLRKENAQSIQSGPTDVSNFDTSVTKPCFPSFNK*SMMKGRALVRLTPTGYGIFPN*DLKRSRRGMT*RISITLTSA 1287
Range 4: 1495 to 1659 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
55.6 bits(115) | 0.0 | 30/55(55%) | 0/55(0%) | Minus/Minus |
Query 675 TSSGSRVLVSVTSSSIQ*LHLSKNELDRPAAMDCPKMR*RERFGFPTYFSGKKAV 839 TSS S + SSSIQ*L L + RP A P +R RER G PTYFSGK AV Subject 1495 TSSVSSSVCQEQSSSIQ*LTLERKPFVRPEARV*PSIRCRERSGLPTYFSGKYAV 1659
Range 5: 1294 to 1425 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
44.6 bits(91) | 0.0 | 23/44(52%) | 0/44(0%) | Minus/Minus |
Query 474 MPLSENMTLEGLISKPSWLI**ENSSIEKSWSSDVAISSPTTNI 605 +P EN+TL LISKPS * EN S K ++VA+SSPT I Subject 1294 IPRFENITLSTLISKPSCPT*KENCSTSKLEGTEVAMSSPTAKI 1425
Range 6: 823 to 1287 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
84.5 bits(178) | 0.0 | 54/155(35%) | 0/155(0%) | Plus/Plus |
Query 6 SGSQSHGNALLHTFS*TLFRHVWQDPLPCRS*YD*GTTFHY*QPT***EIRSCHRYQ*A*YISRSRLD*LGFLAAQVVLRHGHDSFI*NS*FTCFRLSSLLLQTHTYSLTFWSIDQEGGWRSFRFRLYPTR*HSCHDIGYGLLTLTYGTQEARHY 470 S SQ + +AL H+ TL + +D +PCRS G+ FH+ * + R CHR ++ S LD LG L + +L HGHD ++ F RL +LLLQ H+YSL FW+ E G R +P ++ + + LL G HY Subject 823 SRSQGY*DALRHSPPRTLQISIREDSVPCRSQSYQGSPFHHRSLVE*WKARFCHRCVEVRHVRWS*LDRLGVLLS*GLLLHGHDRIKRDAQFPRLRLLALLLQAHSYSLPFWTTRSEVGRCPLRIWFHPDSRYALYTLDDDLLYA*NGLPRG*HY 1287
Range 7: 1293 to 1658 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
57.9 bits(120) | 0.0 | 42/122(34%) | 0/122(0%) | Plus/Plus |
Query 473 RCL*LATIWQHPTTTISQSRSFLII*ASSVLKLTLPKSCSLTRA*NSSSSATPNGVVDFTVPSKNFSRLLSFLKSMSETQTVHVNAFWDNPSPLVYPTHSSTNVTIGWKSLSHSPAPSTRTK 838 + L LAT W P+ S S * +S K L + CS T +S+S AT N VV V + + + L+SM T+ N + P P V T SS +TIGW+S + T TK Subject 1293 KSLLLATTWLPPSLLASMLSSSPFT*DNSASKSMLIR*CSQTAVLSSNSWATQNTVVISGVLLTSCFKQRTSLRSMLATRNALDNVYSVKPWPQV*QTASSPKLTIGWRSFALGTQS*TLTK 1658
Range 8: 827 to 1288 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
114.2 bits(243) | 0.0 | 64/154(42%) | 0/154(0%) | Minus/Minus |
Query 10 NNVGLLVSHT*A*VIRSQCRDKSVNELGKAGTGRNATRLLDQLTRR*ENRCAFEVVMKKVENM*ITSFR*SCHAHVEERLELRESPVNPIWTD*CIKLTDIGDKTEFLIIK*VVNNER*CLSHITTYRVRGLAKHVGKAFN*RYAVAHFHDFDF 471 +NV LLV+H+ V R Q K ++ LG+ +G + +RL ++L+RR ENR A EVV+++VE++ I * CHAHV E L+ E PV+P+ T+ + L IGDKT II+ V+++ER L I + RVR L + +AF V H ++ DF Subject 827 DNVILLVTHSKHRVGRHQECTKRIDYLGETRSGGDTSRLPNELSRREENRSALEVVVQEVEDVGIARLA*FCHAHVVEVLKKGERPVDPVRTNGRV*LRHIGDKTVLSIIQQVIDDERESLGKIDSDRVRNLPELRFEAFEEGNDVTHLNNLDF 1288
Grapevine partitivirus isolate 3138 03 561 RNA dependent RNA polymerase (RdRp) gene, complete cds
Sequence ID: JX658570.1 Length: 1775 Number of Matches: 2
Range 1: 1219 to 1530 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
56.5 bits(117) | 0.0 | 30/104(29%) | 0/104(0%) | Plus/Plus |
Query 463 DIIKMFVVGDDMATSDDHDFSIEEFSHYMSQLGFEINPSKVMFSDKGIELKFLGYSKRGGGLYRPIEELLQTAFFPEKYVGNPNRSRQRILGQSIAAGLSNSFF 774 +I + V+GDD A +F + G + P K + +E K LG + RGG +RP EE + A +PE V + + S R++G I + + F Subject 1219 EIRNLKVLGDDSAFRTGSEFDLARAQEDADVTGMVLKPEKCEKTTDPVEFKLLGTTYRGGRPHRPTEEWFKLALYPEGGVSSLDVSLTRLVGLWIGGAMHDLHF 1530
Xinzhou partiti like virus 1 strain XZSJSC65291 segment Seg 1 RdRp gene, complete cds
Sequence ID: KX884238.1 Length: 1523 Number of Matches: 3
Range 1: 752 to 892 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.7 bits(100) | 0.0 | 20/47(43%) | 0/47(0%) | Plus/Plus |
Query 82 PYPVGRNMTKALPFIIDNLLDDKKFGLVTDISKLDTSVGPDWIDWAF 222 P +G++M K LP+ ++ LL D F DIS D+SV +IDW F Subject 752 PIYIGKDMFKELPYTLNRLLRDNFFAYCIDISAFDSSVNQIFIDWFF 892
Range 2: 1112 to 1417 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
43.2 bits(88) | 0.0 | 25/102(25%) | 0/102(0%) | Plus/Plus |
Query 466 IIKMFVVGDDMATSDDHDFSIEEFSHYMSQLGFEINPSKVMFSDKGIELKFLGYSKRGGGLYRPIEELLQTAFFPEKYVGNPNRSRQRILGQSIAAGLSNSF 771 ++ +V+GDD + +E F + GF++N K + S E+ FLG++ G L R L A E + N +++ R+ +G ++ F Subject 1112 VVPTYVLGDDSIFCHHNPNHLESFRVLFEEFGFKLNVRKTIVSKSSQEIVFLGHNFYGSRLTRDDFTLACLAIHTETPIVNSSQTVVRLASLLYDSGHNSFF 1417
Xinzhou partiti like virus 1 strain XZSJSC65291 segment Seg 1 RdRp gene, complete cds
Sequence ID: NC_032131.1 Length: 1523 Number of Matches: 3
Range 1: 752 to 892 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.7 bits(100) | 0.0 | 20/47(43%) | 0/47(0%) | Plus/Plus |
Query 82 PYPVGRNMTKALPFIIDNLLDDKKFGLVTDISKLDTSVGPDWIDWAF 222 P +G++M K LP+ ++ LL D F DIS D+SV +IDW F Subject 752 PIYIGKDMFKELPYTLNRLLRDNFFAYCIDISAFDSSVNQIFIDWFF 892
Range 2: 1112 to 1417 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
43.2 bits(88) | 0.0 | 25/102(25%) | 0/102(0%) | Plus/Plus |
Query 466 IIKMFVVGDDMATSDDHDFSIEEFSHYMSQLGFEINPSKVMFSDKGIELKFLGYSKRGGGLYRPIEELLQTAFFPEKYVGNPNRSRQRILGQSIAAGLSNSF 771 ++ +V+GDD + +E F + GF++N K + S E+ FLG++ G L R L A E + N +++ R+ +G ++ F Subject 1112 VVPTYVLGDDSIFCHHNPNHLESFRVLFEEFGFKLNVRKTIVSKSSQEIVFLGHNFYGSRLTRDDFTLACLAIHTETPIVNSSQTVVRLASLLYDSGHNSFF 1417