Nucleotide Sequence (509 letters)
Query ID: | ds2016-133_14 |
Query definition: | No definition line |
Query length: | 603 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
281.0 | 1433.6 | 24% | 7.357e-74 | 67% | JX559646.1 | |
277.4 | 1472.1 | 24% | 9.336e-73 | 72% | AB277784.1 | |
276.9 | 1385.3 | 25% | 1.283e-72 | 59% | HE591388.1 | |
276.9 | 1416.6 | 24% | 1.283e-72 | 67% | KC427107.1 | |
276.5 | 1492.7 | 15% | 1.762e-72 | 71% | FR691076.1 |
Alignments
Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome
Sequence ID: JX559646.1 Length: 8726 Number of Matches: 8
Range 1: 7091 to 7489 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
281.0 bits(607) | 0.0 | 117/133(88%) | 0/133(0%) | Minus/Plus |
Query 3 TNPNSSCPVRFEVQPLTL*PF*NQETQPLKTGTGFILLLQDIGIN*SLCSKMPFQQPANWAKTITPLTVGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTTRITYCGPKQSFPSSGIFGQSENFVPLM 401 T NSSC V+FEVQP *PF*NQE QP KT TGF LL QDIG N*SLCS+MPFQQPANWAKTITPLTVGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGT ITYCGPKQSFPSSGIFGQSENFVPLM Subject 7091 TTLNSSCRVKFEVQPSMW*PF*NQEIQPQKTSTGFTLLPQDIGRN*SLCSEMPFQQPANWAKTITPLTVGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPKQSFPSSGIFGQSENFVPLM 7489
Range 2: 7060 to 7491 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
276.5 bits(597) | 0.0 | 116/144(81%) | 0/144(0%) | Plus/Minus |
Query 1 SIKGTKFSDCPNIPELGKDCLGPQ*VILVVPSL*RPP*GN*WMLSPEYGKFDFLKKCSTSPMPKPTVNGVMVFAQLAGC*KGILLHKD*FIPMSCSSNIKPVPVFRGWVS*F*KGYNVKG*TSNLTGQLEFGFVRSSKIHRLLA 432 SIKGTKFSD PNIPELG DCLGPQ*VIL VPSL*RPP*GN*WMLSPEYG+FDFL+KCSTSP+PKPTV GV+VFAQLAGC*KGI LH D F+PMSC SN+KPV VF GW+S*F KGY+++G*TSN T QLEF VR+S+I+RLLA Subject 7060 SIKGTKFSD*PNIPELGNDCLGPQ*VILFVPSL*RPP*GN*WMLSPEYGRFDFLRKCSTSPIPKPTVKGVIVFAQLAGC*KGISLHNDQFLPMSCGSNVKPVLVFWGWIS*FQKGYHIEG*TSNFTRQLEFRVVRNSEIYRLLA 7491
Range 3: 7063 to 7491 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
260.9 bits(563) | 0.0 | 107/143(75%) | 0/143(0%) | Minus/Plus |
Query 1 KEAVDLAAAHKSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHRNKLILMQ*NAFSAACQLGKDHNSIDCWFGHWACAALFEEVKFTIFWR*HPSISSRGALQGRHNKNNLLWP*TVLSQLRDIRAV*KLCALNA 429 KEAVDLA AH SEFKLPCEVRGSTFNVVTLLKSRDPTPED+HWFYIAATRHR KLI+MQ*+AFSAACQLG+++NS +CWF +W CAA E+VK T+F R HPSISSRGALQG H + NLLW V+SQ +I +V*+ CALNA Subject 7063 KEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDKHWFYIAATRHRKKLIIMQ*DAFSAACQLGENYNSFNCWFRNWTCAAFSEKVKSTVFRRQHPSISSRGALQGWHKEYNLLWSQAVISQFGNIWSV*EFCALNA 7491
Range 4: 7062 to 7490 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
240.7 bits(519) | 0.0 | 106/143(74%) | 0/143(0%) | Plus/Minus |
Query 2 ALRAQSFQTARISLSWERTV*GHSKLFLLCRPCNAPREEIDGCYLQNMVNLTSSKSAAQAQCPNQQSMELWSLPNWQAAEKAFYCIRINLFLCLVAAI*NQCLSSGVGSLDFKRVTTLKVEPRTSQGNLNSDLCAAARSTASL 430 ALRAQ+ QT +I +WE T HSKL+ LC PCNAPREEIDGC L N V+LT S++AAQ Q NQQ EL PNWQAAEKA +CI IN FLCLVAA+*NQCLSSGVGSLDFKRVTTLKVEPRTS GNLNS+LCA ARSTASL Subject 7062 ALRAQNSQTDQIFPNWEMTAWDHSKLYSLCHPCNAPREEIDGCCLLNTVDLTFSENAAQVQFLNQQLKEL*FSPNWQAAEKASHCIMINFFLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPRTSHGNLNSELCATARSTASL 7490
Range 5: 7077 to 7277 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
109.7 bits(233) | 0.0 | 48/67(72%) | 0/67(0%) | Minus/Plus |
Query 215 SCCCAQIRIQVAL*GSRFNL*RCNPFKIKRPNP*RQALVLYCCYKT*E*INPYAVKCLFSSLPIGQR 415 S CCAQ+ IQVA+* SRFNL NPF+IKR NP RQALVL+CC+KT*E I+ YAV+CLFSSLPIG++ Subject 7077 SRCCAQL*IQVAV*SSRFNLQCGNPFEIKRSNPRRQALVLHCCHKT*EEIDHYAVRCLFSSLPIGRK 7277
Range 6: 7317 to 7490 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
86.8 bits(183) | 0.0 | 39/58(67%) | 0/58(0%) | Minus/Plus |
Query 2 CCTF*GSQIYHILEITSINFLTGGVTGTAQQE*LTVALNSPFPAQGYSGSLKTLCP*C 175 CC F* SQIY I E TSINFLTGGVTG AQ+ *LTV +S FP + Y SL+ LCP*C Subject 7317 CCIF*ESQIYRIQETTSINFLTGGVTGMAQRV*LTVVPSSHFPVREYLVSLRILCP*C 7490
Range 7: 7181 to 7489 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
146.8 bits(314) | 0.0 | 70/103(68%) | 0/103(0%) | Plus/Minus |
Query 3 H*GHKVFRLPEYP*AGKGLFRATVSYSCCAVPVTPPVRKLMDVISRIW*I*LPQKVQHKPNAQTNSQWSYGLCPIGRLLKRHFTA*GLIYSYVL*QQYKTSAC 311 H*GHK+ RL +Y GK L TVSY+ CA+PVTPPVRKLMDV+S I *I*L QK+QHK N+ TNS SY PIGRLLKRH TA* I SYVL QQ KTSAC Subject 7181 H*GHKILRLTKYSRTGK*LLGTTVSYTLCAIPVTPPVRKLMDVVS*IR*I*LSQKMQHKSNS*TNS*RSYSFRPIGRLLKRHLTA**SISSYVLWQQCKTSAC 7489
Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OE8
Sequence ID: AB277784.1 Length: 2876 Number of Matches: 8
Range 1: 1347 to 1745 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
277.4 bits(599) | 0.0 | 115/133(86%) | 0/133(0%) | Minus/Plus |
Query 3 TNPNSSCPVRFEVQPLTL*PF*NQETQPLKTGTGFILLLQDIGIN*SLCSKMPFQQPANWAKTITPLTVGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTTRITYCGPKQSFPSSGIFGQSENFVPLM 401 T NSS VRFEVQP *PF*NQETQP +TGTGF L QDIG N SLCSKMPFQQPANWAKTITPLT+GLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGT ITYCGPKQSFPSSG+FGQSENFVPLM Subject 1347 TTLNSSYRVRFEVQPSMW*PF*NQETQPQRTGTGFTSLPQDIGRNWSLCSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPKQSFPSSGVFGQSENFVPLM 1745
Range 2: 1316 to 1747 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
273.2 bits(590) | 0.0 | 116/144(81%) | 0/144(0%) | Plus/Minus |
Query 1 SIKGTKFSDCPNIPELGKDCLGPQ*VILVVPSL*RPP*GN*WMLSPEYGKFDFLKKCSTSPMPKPTVNGVMVFAQLAGC*KGILLHKD*FIPMSCSSNIKPVPVFRGWVS*F*KGYNVKG*TSNLTGQLEFGFVRSSKIHRLLA 432 SIKGTKFSD P PELGKDCLGPQ*VIL VPS *RPP*GN*WMLSPEYG+FDFL+KCSTSP+PKP VNGVMVFAQLAGC*KGILLH D F+PMSC S++KPVPV GWVS*F KGY+++G*TSNLT LEF VR+S+I+RLLA Subject 1316 SIKGTKFSD*PKTPELGKDCLGPQ*VILFVPSR*RPP*GN*WMLSPEYGRFDFLRKCSTSPIPKPIVNGVMVFAQLAGC*KGILLHNDQFLPMSCGSDVKPVPVLWGWVS*FQKGYHIEG*TSNLTR*LEFRVVRNSEIYRLLA 1747
Range 3: 1319 to 1747 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
267.3 bits(577) | 0.0 | 112/143(78%) | 0/143(0%) | Minus/Plus |
Query 1 KEAVDLAAAHKSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHRNKLILMQ*NAFSAACQLGKDHNSIDCWFGHWACAALFEEVKFTIFWR*HPSISSRGALQGRHNKNNLLWP*TVLSQLRDIRAV*KLCALNA 429 KEAVDLA AH SEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHR KL++MQ*NAFSAAC LGK+HNSID W +W CAA E+VK TIF R HPSISSRGAL GRH K +LLWP* VL Q R +V*+ CALNA Subject 1319 KEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHRKKLVIMQ*NAFSAAC*LGKNHNSIDYWLRNWTCAAFSEKVKSTIFRRQHPSISSRGALPGRHKKYHLLWP*AVLPQFRSFWSV*EFCALNA 1747
Range 4: 1318 to 1746 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
248.0 bits(535) | 0.0 | 110/143(77%) | 0/143(0%) | Plus/Minus |
Query 2 ALRAQSFQTARISLSWERTV*GHSKLFLLCRPCNAPREEIDGCYLQNMVNLTSSKSAAQAQCPNQQSMELWSLPNWQAAEKAFYCIRINLFLCLVAAI*NQCLSSGVGSLDFKRVTTLKVEPRTSQGNLNSDLCAAARSTASL 430 ALRAQ+ QT + L+W RT *GHSK + LCRP NAPREEIDGC L NMV+LT S++AAQ Q +Q SMELW LPN QAAEKAFYCI N FLCLVAA+*NQCLSSGVGSLDFKRVTTLKVEPRTS GNLNS+LCA ARSTASL Subject 1318 ALRAQNSQTDQKLLNWGRTA*GHSK*YFLCRPGNAPREEIDGCCLLNMVDLTFSENAAQVQFLSQ*SMELWFLPN*QAAEKAFYCIMTNFFLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPRTSHGNLNSELCATARSTASL 1746
Range 5: 1333 to 1536 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.9 bits(227) | 0.0 | 49/68(72%) | 0/68(0%) | Minus/Plus |
Query 212 SCCCAQIRIQVAL*GSRFNL*RCNPFKIKRPNP*RQALVLYCCYKT*E*INPYAVKCLFSSLPIGQRP 415 S CCAQ+ IQV +*GSRFNL NPF+IKRPNP QALVL+ C+KT*E I YAVKCLFSSL IGQ+P Subject 1333 SRCCAQL*IQVTV*GSRFNLQCGNPFEIKRPNPRGQALVLHRCHKT*EEIGHYAVKCLFSSLLIGQKP 1536
Range 6: 1573 to 1746 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
96.4 bits(204) | 0.0 | 42/58(72%) | 0/58(0%) | Minus/Plus |
Query 2 CCTF*GSQIYHILEITSINFLTGGVTGTAQQE*LTVALNSPFPAQGYSGSLKTLCP*C 175 CC F* SQIYHI E TSINFLTGGVTGTAQ+ LTVAL+SP P Q + SL+ LCP*C Subject 1573 CCIF*ESQIYHIQETTSINFLTGGVTGTAQKVSLTVALSSPSPVQEFLVSLRILCP*C 1746
Range 7: 1437 to 1745 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
168.8 bits(362) | 0.0 | 75/103(73%) | 0/103(0%) | Plus/Minus |
Query 3 H*GHKVFRLPEYP*AGKGLFRATVSYSCCAVPVTPPVRKLMDVISRIW*I*LPQKVQHKPNAQTNSQWSYGLCPIGRLLKRHFTA*GLIYSYVL*QQYKTSAC 311 H*GHK+ RL + * G+GL RATVS + CAVPVTPPVRKLMDV+S IW*I*L QK+QHK N+ NSQWSYG CPI RLLKRHFTA* I SYVL Q+ KTSAC Subject 1437 H*GHKILRLTKNS*TGEGLLRATVSDTFCAVPVTPPVRKLMDVVS*IW*I*LSQKMQHKSNS*ANSQWSYGFCPISRLLKRHFTA**PISSYVLWQRCKTSAC 1745
Grapevine rupestris stem pitting associated virus complete genome, isolate PG, genomic RNA
Sequence ID: HE591388.1 Length: 8725 Number of Matches: 7
Range 1: 7063 to 7491 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
276.9 bits(598) | 0.0 | 114/143(80%) | 0/143(0%) | Minus/Plus |
Query 1 KEAVDLAAAHKSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHRNKLILMQ*NAFSAACQLGKDHNSIDCWFGHWACAALFEEVKFTIFWR*HPSISSRGALQGRHNKNNLLWP*TVLSQLRDIRAV*KLCALNA 429 KEAVDLA AH SEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHR KLI+MQ*+AFSAAC+LGK+HNSID W GHWACAA FEEVK T+F R HPSI SR ALQGR+ K NLLW +L QL DIR +*+ CALNA Subject 7063 KEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWLGHWACAAFFEEVKSTLFRRQHPSIPSRWALQGRYKKYNLLWSKAILPQLWDIRPI*EFCALNA 7491
Range 2: 7060 to 7491 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
265.9 bits(574) | 0.0 | 114/144(79%) | 0/144(0%) | Plus/Minus |
Query 1 SIKGTKFSDCPNIPELGKDCLGPQ*VILVVPSL*RPP*GN*WMLSPEYGKFDFLKKCSTSPMPKPTVNGVMVFAQLAGC*KGILLHKD*FIPMSCSSNIKPVPVFRGWVS*F*KGYNVKG*TSNLTGQLEFGFVRSSKIHRLLA 432 SIKGTKFSD PNIPELGKDC GPQ*VIL VPSL*RPP*GN*WMLSPE G+FDFLKKCSTSPMPKPTVNGVMVFAQ AGC*KGILLH F+P+SCSSN+KPVP+ GW+S*F K Y+VK *TSN EF VR+S+IH LLA Subject 7060 SIKGTKFSDWPNIPELGKDCFGPQ*VILFVPSL*RPP*GN*WMLSPE*GRFDFLKKCSTSPMPKPTVNGVMVFAQFAGC*KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFAR*FEFRVVRNSEIHCLLA 7491
Range 3: 7091 to 7489 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
260.9 bits(563) | 0.0 | 111/133(83%) | 0/133(0%) | Minus/Plus |
Query 3 TNPNSSCPVRFEVQPLTL*PF*NQETQPLKTGTGFILLLQDIGIN*SLCSKMPFQQPANWAKTITPLTVGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTTRITYCGPKQSFPSSGIFGQSENFVPLM 401 T NS+ + EVQ LT * F*NQE QP + GTGF LLLQD G N* CSKMPFQQPANWAKTITPLTVGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGT ITYCGPKQSFPSSGIFGQSENFVPLM Subject 7091 TTLNSNYLAKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQQPANWAKTITPLTVGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPKQSFPSSGIFGQSENFVPLM 7489
Range 4: 7062 to 7490 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
243.9 bits(526) | 0.0 | 108/143(76%) | 0/143(0%) | Plus/Minus |
Query 2 ALRAQSFQTARISLSWERTV*GHSKLFLLCRPCNAPREEIDGCYLQNMVNLTSSKSAAQAQCPNQQSMELWSLPNWQAAEKAFYCIRINLFLCLVAAI*NQCLSSGVGSLDFKRVTTLKVEPRTSQGNLNSDLCAAARSTASL 430 ALRAQ+ Q RIS SW R HSKL+ L RPCNA RE IDGC L N V+LTSSK+AAQAQCP+Q SMELW LPN QAAEKA YC+ I+ LCLVAA+*NQCLSSGVGSLDF+RVTTLKVEP TSQGNLNS+LCA ARSTASL Subject 7062 ALRAQNSQIGRISQSWGRIALDHSKLYFLYRPCNAHREGIDGCCLLNKVDLTSSKNAAQAQCPSQLSMELWFLPNSQAAEKASYCMIISFSLCLVAAM*NQCLSSGVGSLDFRRVTTLKVEPLTSQGNLNSELCATARSTASL 7490
Range 5: 7184 to 7489 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
163.7 bits(351) | 0.0 | 73/102(72%) | 0/102(0%) | Plus/Minus |
Query 3 H*GHKVFRLPEYP*AGKGLFRATVSYSCCAVPVTPPVRKLMDVISRIW*I*LPQKVQHKPNAQTNSQWSYGLCPIGRLLKRHFTA*GLIYSYVL*QQYKTSA 308 H*GHK+ RL EYP AG+GL TVSY+ C VPVTP VR+LMDV+S I *I*LPQK+QHKPNAQ N QWSYG CPI RLLKRH TA* + VL*QQ KTSA Subject 7184 H*GHKILRLAEYPRAGEGLLWTTVSYTFCTVPVTPTVRELMDVVS*IR*I*LPQKMQHKPNAQANCQWSYGFCPIRRLLKRHLTA*LSVSPCVL*QQCKTSA 7489
Range 6: 7317 to 7490 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
88.6 bits(187) | 0.0 | 39/58(67%) | 0/58(0%) | Minus/Plus |
Query 2 CCTF*GSQIYHILEITSINFLTGGVTGTAQQE*LTVALNSPFPAQGYSGSLKTLCP*C 175 CC F*GSQIY I E TSIN LT GVTGT Q+ *LTV ++P PA GYS +L+ LCP*C Subject 7317 CCIF*GSQIYLIQETTSINSLTVGVTGTVQKV*LTVVQSNPSPALGYSANLRILCP*C 7490
Range 7: 7077 to 7280 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
85.4 bits(180) | 0.0 | 40/68(59%) | 0/68(0%) | Minus/Plus |
Query 212 SCCCAQIRIQVAL*GSRFNL*RCNPFKIKRPNP*RQALVLYCCYKT*E*INPYAVKCLFSSLPIGQRP 415 S CCAQ+ IQ+ L RFN *R N +IKR NP ALVL+CCYKT + +AV+CLFSSL IGQ+P Subject 7077 SRCCAQL*IQITLRS*RFNF*RRNSSEIKRSNPRG*ALVLHCCYKTQGETDNHAVRCLFSSLRIGQKP 7280
Grapevine rupestris stem pitting associated virus isolate GRSPaV WA, complete genome
Sequence ID: KC427107.1 Length: 8742 Number of Matches: 8
Range 1: 7091 to 7489 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
276.9 bits(598) | 0.0 | 115/133(86%) | 0/133(0%) | Minus/Plus |
Query 3 TNPNSSCPVRFEVQPLTL*PF*NQETQPLKTGTGFILLLQDIGIN*SLCSKMPFQQPANWAKTITPLTVGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTTRITYCGPKQSFPSSGIFGQSENFVPLM 401 T NSSC V+FEVQP *PF*NQE QP KT TGF LL QDIG N*SLCS+MPFQQPA+WAKTITPLTVGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRY+DGT ITYCGPKQSFPSSGIFGQSENFVPLM Subject 7091 TTLNSSCRVKFEVQPSMW*PF*NQEIQPQKTSTGFTLLPQDIGRN*SLCSEMPFQQPADWAKTITPLTVGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYQDGTKSITYCGPKQSFPSSGIFGQSENFVPLM 7489
Range 2: 7060 to 7491 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
275.1 bits(594) | 0.0 | 116/144(81%) | 0/144(0%) | Plus/Minus |
Query 1 SIKGTKFSDCPNIPELGKDCLGPQ*VILVVPSL*RPP*GN*WMLSPEYGKFDFLKKCSTSPMPKPTVNGVMVFAQLAGC*KGILLHKD*FIPMSCSSNIKPVPVFRGWVS*F*KGYNVKG*TSNLTGQLEFGFVRSSKIHRLLA 432 SIKGTKFSD PNIPELGKDCLGPQ*VIL VPS RPP*GN*WMLSPEYG+FDFLKKCSTSP+PKPTVNGV+VFAQ AGC*KGI LH D F+PMSC SN+KPV VF GW+S*F KGY+++G*TSN T QLEF VR+S+I+RLLA Subject 7060 SIKGTKFSD*PNIPELGKDCLGPQ*VILFVPSWYRPP*GN*WMLSPEYGRFDFLKKCSTSPIPKPTVNGVIVFAQSAGC*KGISLHNDQFLPMSCGSNVKPVLVFWGWIS*FQKGYHIEG*TSNFTRQLEFRVVRNSEIYRLLA 7491
Range 3: 7063 to 7491 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
264.5 bits(571) | 0.0 | 108/143(76%) | 0/143(0%) | Minus/Plus |
Query 1 KEAVDLAAAHKSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHRNKLILMQ*NAFSAACQLGKDHNSIDCWFGHWACAALFEEVKFTIFWR*HPSISSRGALQGRHNKNNLLWP*TVLSQLRDIRAV*KLCALNA 429 KEAVDLA AH SEFKLPCEVRGSTFNVVTLLKSRDPTPED+HWFYIAATRHR KLI+MQ*+AFSAAC LG+++NSI+CWF +W CAA FE+VK T+F R HPSISSRG++ GRH + NLLW * VL QL +I +V*+ CALNA Subject 7063 KEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDKHWFYIAATRHRKKLIIMQ*DAFSAACGLGENYNSINCWFRNWTCAAFFEKVKSTVFRRQHPSISSRGSIPGRHKEYNLLWS*AVLPQLGNIWSV*EFCALNA 7491
Range 4: 7062 to 7490 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
231.5 bits(499) | 0.0 | 107/143(75%) | 0/143(0%) | Plus/Minus |
Query 2 ALRAQSFQTARISLSWERTV*GHSKLFLLCRPCNAPREEIDGCYLQNMVNLTSSKSAAQAQCPNQQSMELWSLPNWQAAEKAFYCIRINLFLCLVAAI*NQCLSSGVGSLDFKRVTTLKVEPRTSQGNLNSDLCAAARSTASL 430 ALRAQ+ QT +I SW RT * HSKL+ LCRP PREEIDGC L N V+LT SK+AAQ Q NQQ MEL PN QAAEKA +CI IN FLCLVAA+*NQCLSSGVGSLDFKRVTTLKVEPRTS GNLNS+LCA ARSTASL Subject 7062 ALRAQNSQTDQIFPSWGRTA*DHSKLYSLCRPGIDPREEIDGCCLLNTVDLTFSKNAAQVQFLNQQLMEL*FSPNPQAAEKASHCIMINFFLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPRTSHGNLNSELCATARSTASL 7490
Range 5: 7077 to 7277 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
105.5 bits(224) | 0.0 | 47/67(70%) | 0/67(0%) | Minus/Plus |
Query 215 SCCCAQIRIQVAL*GSRFNL*RCNPFKIKRPNP*RQALVLYCCYKT*E*INPYAVKCLFSSLPIGQR 415 S CCAQ+ IQVA+* SRFNL NPF+IKR NP RQALVL+CC+KT*E I+ YAV+CLFSSL IG++ Subject 7077 SRCCAQL*IQVAV*SSRFNLQCGNPFEIKRSNPRRQALVLHCCHKT*EEIDHYAVRCLFSSLRIGRK 7277
Range 6: 7317 to 7490 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
84.0 bits(177) | 0.0 | 39/58(67%) | 0/58(0%) | Minus/Plus |
Query 2 CCTF*GSQIYHILEITSINFLTGGVTGTAQQE*LTVALNSPFPAQGYSGSLKTLCP*C 175 CC F* SQIY I E TSINFLTG T TAQ+ *LTV L+SP PA+ Y SL+ LCP*C Subject 7317 CCIF*ESQIYRIQETTSINFLTGVDTRTAQRV*LTVVLSSPSPAREYLVSLRILCP*C 7490
Range 7: 7181 to 7489 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
147.7 bits(316) | 0.0 | 70/103(68%) | 0/103(0%) | Plus/Minus |
Query 3 H*GHKVFRLPEYP*AGKGLFRATVSYSCCAVPVTPPVRKLMDVISRIW*I*LPQKVQHKPNAQTNSQWSYGLCPIGRLLKRHFTA*GLIYSYVL*QQYKTSAC 311 H*GHK+ RL +Y AG+GL R TVSY+ CAV V+ PVRKLMDV+S I *I*L QK+QHK N+ TNS WSY PI RLLKRH TA* I SYVL QQ KTSAC Subject 7181 H*GHKILRLTKYSRAGEGLLRTTVSYTLCAVLVSTPVRKLMDVVS*IR*I*LSQKMQHKSNS*TNS*WSYSFRPIRRLLKRHLTA**SISSYVLWQQCKTSAC 7489
Grapevine rupestris stem pitting associated virus complete genome, genomic RNA, isolate GRSPaV MG
Sequence ID: FR691076.1 Length: 8749 Number of Matches: 8
Range 1: 7091 to 7489 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
276.5 bits(597) | 0.0 | 115/133(86%) | 0/133(0%) | Minus/Plus |
Query 3 TNPNSSCPVRFEVQPLTL*PF*NQETQPLKTGTGFILLLQDIGIN*SLCSKMPFQQPANWAKTITPLTVGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTTRITYCGPKQSFPSSGIFGQSENFVPLM 401 T NSSC VRFEVQP *PF*NQETQP +T TGF L QDIG N SLCSKMPFQQPANWAKTITPLT+GLGIGLVLHFLRKSNLPYS DNIHQFPHGGRYRDGT ITYCGPKQSFPSSGIFGQSENFVPLM Subject 7091 TTLNSSCRVRFEVQPSMW*PF*NQETQPQRTSTGFTSLPQDIGRNWSLCSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSRDNIHQFPHGGRYRDGTKSITYCGPKQSFPSSGIFGQSENFVPLM 7489
Range 2: 7063 to 7491 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
272.8 bits(589) | 0.0 | 114/143(80%) | 0/143(0%) | Minus/Plus |
Query 1 KEAVDLAAAHKSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHRNKLILMQ*NAFSAACQLGKDHNSIDCWFGHWACAALFEEVKFTIFWR*HPSISSRGALQGRHNKNNLLWP*TVLSQLRDIRAV*KLCALNA 429 KEAVDLA AH SEFKLPCEVRGSTFNVVTLLKSRDPTPED+HWFYIAATRHR KL++MQ*NAFSAAC LGK+HNSID W +W CAA E+VK TIF R HPSISSRGAL GRH K NLLWP* VL QLR+I +V*+ CALNA Subject 7063 KEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDKHWFYIAATRHRKKLVIMQ*NAFSAAC*LGKNHNSIDYWLRNWTCAAFSEKVKSTIFTRQHPSISSRGALPGRHKKYNLLWP*AVLPQLRNIWSV*EFCALNA 7491
Range 3: 7060 to 7491 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
270.0 bits(583) | 0.0 | 116/144(81%) | 0/144(0%) | Plus/Minus |
Query 1 SIKGTKFSDCPNIPELGKDCLGPQ*VILVVPSL*RPP*GN*WMLSPEYGKFDFLKKCSTSPMPKPTVNGVMVFAQLAGC*KGILLHKD*FIPMSCSSNIKPVPVFRGWVS*F*KGYNVKG*TSNLTGQLEFGFVRSSKIHRLLA 432 SIKGTKFSD PNIPELGKDCLGPQ*VIL VPS *RPP*GN*WMLS EYG+FDFL+KCSTSP+PKP VNGVMVFAQLAGC*KGILLH D F+PMSC S++KPV V GWVS*F KGY+++G*TSNLT QLEF V +S+I+RLLA Subject 7060 SIKGTKFSD*PNIPELGKDCLGPQ*VILFVPSR*RPP*GN*WMLSREYGRFDFLRKCSTSPIPKPIVNGVMVFAQLAGC*KGILLHNDQFLPMSCGSDVKPVLVLWGWVS*FQKGYHIEG*TSNLTRQLEFRVVCNSEIYRLLA 7491
Range 4: 7062 to 7490 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
254.0 bits(548) | 0.0 | 112/143(78%) | 0/143(0%) | Plus/Minus |
Query 2 ALRAQSFQTARISLSWERTV*GHSKLFLLCRPCNAPREEIDGCYLQNMVNLTSSKSAAQAQCPNQQSMELWSLPNWQAAEKAFYCIRINLFLCLVAAI*NQCLSSGVGSLDFKRVTTLKVEPRTSQGNLNSDLCAAARSTASL 430 ALRAQ+ QT +I LSW RT *GHSKL+ LCRP NAPREEIDGC L NMV+LT S++AAQ Q +Q SMELW LP+ QAAEKAFYCI N FLCLVAA+*NQCLSSGVGSLDFKRVTTLKVEPRTS GNLNS+LCA ARSTASL Subject 7062 ALRAQNSQTDQIFLSWGRTA*GHSKLYFLCRPGNAPREEIDGCCLVNMVDLTFSENAAQVQFLSQ*SMELWFLPS*QAAEKAFYCIMTNFFLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPRTSHGNLNSELCATARSTASL 7490
Range 5: 7181 to 7489 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
178.9 bits(384) | 0.0 | 77/103(75%) | 0/103(0%) | Plus/Minus |
Query 3 H*GHKVFRLPEYP*AGKGLFRATVSYSCCAVPVTPPVRKLMDVISRIW*I*LPQKVQHKPNAQTNSQWSYGLCPIGRLLKRHFTA*GLIYSYVL*QQYKTSAC 311 H*GHK+ RL +Y *AG+GL RATVSY+ CAVPVTPPVRKLMDV+S IW*I*L QK+QHK N+ NSQWSYG CP+ RLLKRHFTA* I SYVL Q+ KTSAC Subject 7181 H*GHKILRLTKYS*AGEGLLRATVSYTFCAVPVTPPVRKLMDVVS*IW*I*LSQKMQHKSNS*ANSQWSYGFCPVSRLLKRHFTA**PISSYVLWQRCKTSAC 7489
Range 6: 7076 to 7129 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
34.1 bits(68) | 0.0 | 13/18(72%) | 0/18(0%) | Plus/Minus |
Query 363 NLEPHRAT*IRICAQQQD 416 NLEPH AT*I+ C QQ+D Subject 7076 NLEPHTAT*IQSCVQQRD 7129
Range 7: 7077 to 7280 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
104.6 bits(222) | 0.0 | 48/68(71%) | 0/68(0%) | Minus/Plus |
Query 212 SCCCAQIRIQVAL*GSRFNL*RCNPFKIKRPNP*RQALVLYCCYKT*E*INPYAVKCLFSSLPIGQRP 415 S CC Q+ IQVA+*GSRFNL NPF+IKRPNP QALVL+ C+KT*E I YAVKCLFSSL GQ+P Subject 7077 SRCCTQL*IQVAV*GSRFNLQCGNPFEIKRPNPRGQALVLHRCHKT*EEIGHYAVKCLFSSLLTGQKP 7280
Range 8: 7317 to 7490 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.9 bits(216) | 0.0 | 45/58(78%) | 0/58(0%) | Minus/Plus |
Query 2 CCTF*GSQIYHILEITSINFLTGGVTGTAQQE*LTVALNSPFPAQGYSGSLKTLCP*C 175 CC F* SQIYHI E TSINFLTGGVTGTAQ+ *LTVAL+SP PAQ Y SL+ LCP*C Subject 7317 CCIF*ESQIYHIHETTSINFLTGGVTGTAQKV*LTVALSSPSPAQEYLVSLRILCP*C 7490