Nucleotide Sequence (2854 letters)
Query ID: | ds2016-57_12 |
Query definition: | No definition line |
Query length: | 638 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
93.2 | 223.3 | 8% | 3.109e-32 | 33% | KY357509.1 | |
51.5 | 183.6 | 7% | 6.675e-16 | 29% | KX355156.1 | |
49.2 | 148.6 | 6% | 3.091e-10 | 29% | KX355144.1 | |
49.2 | 148.6 | 6% | 3.091e-10 | 29% | NC_031449.1 | |
45.5 | 143.1 | 4% | 8.024e-09 | 32% | NC_022619.1 |
Alignments
Agaricus bisporus endornavirus 1 isolate AbEV1 2990, partial sequence
Sequence ID: KY357509.1 Length: 12730 Number of Matches: 4
Range 1: 1624 to 1926 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
93.2 bits(197) | 0.0 | 36/101(36%) | 0/101(0%) | Plus/Plus |
Query 1578 ETKREFNVPTLTYNTVLGTMNIPNIVTKRVTVNSKVLQTIMTRGLTGNMGIQGSLDYALAIAHARYSIDDTTYNIYNLDAQGAIEHASIAYALNRRAAAKR 1880 + + F +PT+TYN+ LG + P +V K V ++ ++L T++TR LTGN+ + +Y L AH++Y++ D +++ Y++ AQ ++H I+ L RA KR Subject 1624 DLRNTFTIPTITYNSALGLVGAPIVVIKTVKLHKELLTTLITRNLTGNVSAKELAEYGLGFAHSKYNLFDKSFSHYDVSAQMIMDHVFISVLLCTRATNKR 1926
Range 2: 2455 to 2535 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.3 bits(99) | 0.0 | 15/27(56%) | 0/27(0%) | Plus/Plus |
Query 2616 CGTRYQHSHPFKSLLHPLFNGDCPKCD 2696 C RY+H+H +S +HPLF GDCP C+ Subject 2455 CNNRYKHTHNHESSMHPLFVGDCPWCE 2535
Range 3: 2071 to 2244 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
44.6 bits(91) | 0.0 | 19/58(33%) | 0/58(0%) | Plus/Plus |
Query 2034 NSMNVLTGYASNPVWDELDDWVTKATLADVSSFGIEATATAHAYCNHQHDGCQHFGNG 2207 N+ +VLT YA++PVWDE++ W AT ++ T + + +D C G G Subject 2071 NNNSVLTEYANDPVWDEIESWTHTATNENIQLITHYETPLGCCHTDIHNDSCGCCGLG 2244
Endornavirus like virus clone 8 polyprotein gene, partial cds
Sequence ID: KX355156.1 Length: 4947 Number of Matches: 5
Range 1: 2287 to 2505 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.5 bits(106) | 0.0 | 21/73(29%) | 0/73(0%) | Plus/Plus |
Query 1647 NIVTKRVTVNSKVLQTIMTRGLTGNMGIQGSLDYALAIAHARYSIDDTTYNIYNLDAQGAIEHASIAYALNRR 1865 N+V + + ++ + + R +TG +G+ ++Y L IAH++YS+ D T +L ++ HA +A RR Subject 2287 NVVREPMDLDVDLFNQLCDRNITGTLGLDTLIEYGLGIAHSKYSMSDKTIGNTHLTSKSIKTHAYLAMLYMRR 2505
Range 2: 3220 to 3351 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
44.1 bits(90) | 0.0 | 18/44(41%) | 0/44(0%) | Plus/Plus |
Query 2616 CGTRYQHSHPFKSLLHPLFNGDCPKCDDNTNNPVVRDPKDVQRA 2747 CG RY H+H HP F GDCP C+ T V + Q A Subject 3220 CGNRYNHNHNMTYPQHPEFVGDCPWCEGGTKAKKVTESGTKQGA 3351
Range 3: 2806 to 2877 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
35.9 bits(72) | 0.0 | 11/24(46%) | 0/24(0%) | Plus/Plus |
Query 2160 AYCNHQHDGCQHFGNGQCKCCLSP 2231 A CNH + C H G+ C CC P Subject 2806 ALCNHHNGKCMHNGDNTCVCCGGP 2877
Ceratobasidium endornavirus D isolate Murdoch 4 polyprotein gene, complete cds
Sequence ID: KX355144.1 Length: 19406 Number of Matches: 4
Range 1: 1679 to 1897 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
49.2 bits(101) | 0.0 | 21/73(29%) | 0/73(0%) | Plus/Plus |
Query 1647 NIVTKRVTVNSKVLQTIMTRGLTGNMGIQGSLDYALAIAHARYSIDDTTYNIYNLDAQGAIEHASIAYALNRR 1865 NIV + + + + R +TG +G+ ++Y L IAH++YS+ D + ++ A+ HA +A RR Subject 1679 NIVRVPLKLQPDLFNQLCDRNITGTLGLDNLVEYGLGIAHSKYSMADKSIGNMHISAEDVKLHAYLAMMYMRR 1897
Range 2: 2603 to 2725 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
44.1 bits(90) | 0.0 | 17/41(41%) | 0/41(0%) | Plus/Plus |
Query 2616 CGTRYQHSHPFKSLLHPLFNGDCPKCDDNTNNPVVRDPKDV 2738 CG Y H H + L HP F GDCP C+ V + K V Subject 2603 CGNSYMHKHNWNYLQHPEFVGDCPWCEGGKKAKKVGEDKRV 2725
Ceratobasidium endornavirus D isolate Murdoch 4 polyprotein gene, complete cds
Sequence ID: NC_031449.1 Length: 19406 Number of Matches: 4
Range 1: 1679 to 1897 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
49.2 bits(101) | 0.0 | 21/73(29%) | 0/73(0%) | Plus/Plus |
Query 1647 NIVTKRVTVNSKVLQTIMTRGLTGNMGIQGSLDYALAIAHARYSIDDTTYNIYNLDAQGAIEHASIAYALNRR 1865 NIV + + + + R +TG +G+ ++Y L IAH++YS+ D + ++ A+ HA +A RR Subject 1679 NIVRVPLKLQPDLFNQLCDRNITGTLGLDNLVEYGLGIAHSKYSMADKSIGNMHISAEDVKLHAYLAMMYMRR 1897
Range 2: 2603 to 2725 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
44.1 bits(90) | 0.0 | 17/41(41%) | 0/41(0%) | Plus/Plus |
Query 2616 CGTRYQHSHPFKSLLHPLFNGDCPKCDDNTNNPVVRDPKDV 2738 CG Y H H + L HP F GDCP C+ V + K V Subject 2603 CGNSYMHKHNWNYLQHPEFVGDCPWCEGGKKAKKVGEDKRV 2725
Rhizoctonia cerealis endornavirus 1, complete genome
Sequence ID: NC_022619.1 Length: 17486 Number of Matches: 4
Range 1: 3206 to 3376 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
45.5 bits(93) | 0.0 | 18/57(32%) | 0/57(0%) | Plus/Plus |
Query 1650 IVTKRVTVNSKVLQTIMTRGLTGNMGIQGSLDYALAIAHARYSIDDTTYNIYNLDAQ 1820 IV + + +N + R + G +G+ +Y LAIAH++YS+ D T Y++ A+ Subject 3206 IVRQPLDLNVNFFNQLCDRNINGRVGLDTLTEYGLAIAHSKYSMHDKTITNYDITAR 3376
Range 2: 4139 to 4228 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.5 bits(82) | 0.0 | 12/30(40%) | 0/30(0%) | Plus/Plus |
Query 2616 CGTRYQHSHPFKSLLHPLFNGDCPKCDDNT 2705 CG Y+H H FK++ H +CP C++N+ Subject 4139 CGGVYEHQHKFKNIQHYQHANECPHCNENS 4228