Nucleotide Sequence (756 letters)
Query ID: | ds2016-58_76 |
Query definition: | No definition line |
Query length: | 489 |
Program: | TBLASTX 2.2.29+ |
Database: | /save/stheil/db/refseq_vir/viral.genomic.fna |
Graphic Summary
Descriptions
Alignments
Sclerotinia sclerotiorum botybirnavirus 1 segment 2, complete sequence
Range 1: 1183 to 1416 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
62.5 bits(130) | 0.0 | 31/78(40%) | 0/78(0%) | Plus/Plus |
Query 112 QRADRRDFEAGFVKDKRLAQEFYNAGSIKGQQGDNHVAFLTQALAKVLSIKQADEAQAFCEITIDRDIYNNLIVLEED 345 QR D R+F+A F + K EF G+ K GDNHVA+LT A+ ++L++KQA E + I + I N + ED Subject 1183 QRVDSREFQARFDEMKGFPIEFRLGGTAKSVDGDNHVAWLTIAILRLLALKQAQETNSRGHIEMTSGIANQFGINLED 1416
Range 2: 1639 to 1854 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
46.4 bits(95) | 0.0 | 20/72(28%) | 0/72(0%) | Plus/Plus |
Query 532 DHPMTIVPYFGGIATKVDKLLRIPLCNSQHMIDMTPYIGKKIRLELGVLQETFTSYVKGFNLHNQLNIAKSL 747 D + I P + I + + ++IP N+ I M +ELG + F SYV+ L +Q+N+A+ + Subject 1639 DEELGIQPMYSAIRSSATERMKIPFVNASRAISMNDLKKFNADIELGRAEAVFNSYVRRHELQSQVNVARRI 1854
Range 1: 1539 to 1679 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.3 bits(110) | 0.0 | 19/47(40%) | 0/47(0%) | Plus/Plus |
Query 157 KRLAQEFYNAGSIKGQQGDNHVAFLTQALAKVLSIKQADEAQAFCEI 297 K++ E+Y AG++K Q GDNH+ L Q L + S++QA+E + C + Subject 1539 KKVPSEWYKAGNVKAQFGDNHIGMLVQWLIMLWSVRQAEEQGSTCHV 1679
Range 2: 1923 to 2138 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
44.6 bits(91) | 0.0 | 21/72(29%) | 0/72(0%) | Plus/Plus |
Query 541 MTIVPYFGGIATKVDKLLRIPLCNSQHMIDMTPYIGKKIRLELGVLQETFTSYVKGFNLHNQLNIAKSLLCT 756 ++IVP + T + + LRIPLCNS + + + + G L+ YV+ L +QL+ A+ + C+ Subject 1923 LSIVPTYYTYQTDIREYLRIPLCNSLKALSLVDLSENEYLMTSGGLECIIIDYVRRMGLQDQLHNAQLIACS 2138