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Nucleotide Sequence (545 letters)

Query ID:ds2016-58_48
Query definition:No definition line
Query length:589
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 1 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
55
110
165
220
275
330
385
440
495
545

Descriptions

Alignments

Botrytis porri RNA virus 1 RNA 1, complete genome

Sequence ID: NC_017990.1 Length: 6215 Number of Matches: 4

Range 1: 5177 to 5422 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
96.4 bits(204) 0.0 42/82(51%) 0/82(0%) Plus/Plus
Query        1  HGNVEANKPSVAAQRVTEFYSQWAMLARRGMDRQFCQRVFEQLAIFEIDKDNKVGKHTVLRFLYGTKRGTGLGLYPIAEMPD  246
                HGNVE  + SV  QR+TE YSQ  ML RRG+D    Q+VFE LAI+EI    +V +   L++LYG+KR  GLGL P+    D
Subject   5177  HGNVENKQASVGQQRITEMYSQACMLVRRGLDPARWQKVFEDLAIYEIGYTTQVSRGQCLKYLYGSKRSGGLGLMPLNTATD  5422

Range 2: 5444 to 5668 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.5 bits(141) 0.0 27/75(36%) 0/75(0%) Plus/Plus
Query      271  EVQEVDATVSEELKVAEIIQQNKATRKFKASGDFVSWIEEKYGVTWRHLGKQQAASLFAAANLMEGGAKANVQHQ  495
                E +E    V     +A+ + + +   KFKAS D+V  +E +YGV W+H GK +A +  AA+NL+EG      +H+
Subject   5444  EAEEAAEEVDVAQILADSLVEGRVANKFKASSDYVGTLEREYGVVWKHNGKIKATAQVAASNLVEGITNVGAEHE  5668

Range 3: 5179 to 5403 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
43.7 bits(89) 0.0 29/75(39%) 0/75(0%) Minus/Minus
Query        3  GYSPRPVPRFVPYKNLNTVCLPTLLSLSISKIASCSNTRWQNCLSIPLLANIAHCE*NSVTL*AATEGLLASTFP  227
                G  P+P    +PY+        T +   IS IA  SNT      S PLL +I  CE  SV L   TE  L ST P
Subject   5179  GIKPKPPLLLLPYRYFRHCPRDTWVVYPISYIARSSNTFCHLAGSNPLLTSIQACEYISVILC*PTEACLFSTLP  5403

Range 4: 5467 to 5664 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.3 bits(75) 0.0 26/66(39%) 0/66(0%) Minus/Minus
Query      294  CCTLAFAPPSIXXXXXXXXXXXXLPRCLQVTPYFSSIHDTKSPEALNFLVALFCCIISATLSSSDT  491
                C    F  PS +L AA    A   P C Q TPY  S   T S EALN L  L    +SA++ ++ T
Subject   5467  CSAPTFVIPSTRLDAATCAVALIFPLCFQTTPYSLSNVPT*SLEALNLLATLPSTKLSASICATST  5664

Botrytis porri RNA virus 1 strain GarlicBc 72 segment 1, complete sequence

Sequence ID: JF716350.1 Length: 6215 Number of Matches: 4

Range 1: 5177 to 5422 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
96.4 bits(204) 0.0 42/82(51%) 0/82(0%) Plus/Plus
Query        1  HGNVEANKPSVAAQRVTEFYSQWAMLARRGMDRQFCQRVFEQLAIFEIDKDNKVGKHTVLRFLYGTKRGTGLGLYPIAEMPD  246
                HGNVE  + SV  QR+TE YSQ  ML RRG+D    Q+VFE LAI+EI    +V +   L++LYG+KR  GLGL P+    D
Subject   5177  HGNVENKQASVGQQRITEMYSQACMLVRRGLDPARWQKVFEDLAIYEIGYTTQVSRGQCLKYLYGSKRSGGLGLMPLNTATD  5422

Range 2: 5444 to 5668 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.5 bits(141) 0.0 27/75(36%) 0/75(0%) Plus/Plus
Query      271  EVQEVDATVSEELKVAEIIQQNKATRKFKASGDFVSWIEEKYGVTWRHLGKQQAASLFAAANLMEGGAKANVQHQ  495
                E +E    V     +A+ + + +   KFKAS D+V  +E +YGV W+H GK +A +  AA+NL+EG      +H+
Subject   5444  EAEEAAEEVDVAQILADSLVEGRVANKFKASSDYVGTLEREYGVVWKHNGKIKATAQVAASNLVEGITNVGAEHE  5668

Range 3: 5179 to 5403 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
43.7 bits(89) 0.0 29/75(39%) 0/75(0%) Minus/Minus
Query        3  GYSPRPVPRFVPYKNLNTVCLPTLLSLSISKIASCSNTRWQNCLSIPLLANIAHCE*NSVTL*AATEGLLASTFP  227
                G  P+P    +PY+        T +   IS IA  SNT      S PLL +I  CE  SV L   TE  L ST P
Subject   5179  GIKPKPPLLLLPYRYFRHCPRDTWVVYPISYIARSSNTFCHLAGSNPLLTSIQACEYISVILC*PTEACLFSTLP  5403

Range 4: 5467 to 5664 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
37.3 bits(75) 0.0 26/66(39%) 0/66(0%) Minus/Minus
Query      294  CCTLAFAPPSIXXXXXXXXXXXXLPRCLQVTPYFSSIHDTKSPEALNFLVALFCCIISATLSSSDT  491
                C    F  PS +L AA    A   P C Q TPY  S   T S EALN L  L    +SA++ ++ T
Subject   5467  CSAPTFVIPSTRLDAATCAVALIFPLCFQTTPYSLSNVPT*SLEALNLLATLPSTKLSASICATST  5664

Uncultured totivirus genomic RNA containing putative intergenic spacer region, contig 406.2Pv1_cloning_1

Sequence ID: HE579716.1 Length: 1043 Number of Matches: 2

Range 1: 71 to 301 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
93.2 bits(197) 0.0 40/77(52%) 0/77(0%) Plus/Plus
Query        1  HGNVEANKPSVAAQRVTEFYSQWAMLARRGMDRQFCQRVFEQLAIFEIDKDNKVGKHTVLRFLYGTKRGTGLGLYPI  231
                HG VE N PS+ AQR +E YSQ  ML RRG DR   Q +FE L+I+EI    +V +   L +LYGTK    LGL PI
Subject     71  HGXVETNTPSMGAQRXSEMYSQSCMLVRRGXDRGMWQNIFEDLSIYEIGYSGEVSRKQCLTYLYGTKTSGALGLMPI  301

Range 2: 377 to 580 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
67.0 bits(140) 0.0 25/68(37%) 0/68(0%) Plus/Plus
Query      310  KVAEIIQQNKATRKFKASGDFVSWIEEKYGVTWRHLGKQQAASLFAAANLMEGGAKANVQHQAALVSA  513
                K+A+++   K  + FKAS DF   +E +Y V W+H GK QA +L AA NL +G    +  H+   +++
Subject    377  KLAKLLVDGKIAKNFKASNDFADLLEREYDVVWKHQGKVQATALVAAQNLTDGSTDRHAAHEQLFLNS  580

Soybean leaf associated botybirnavirus 1 isolate SaBRV1 1 segment RNA2, partial sequence

Sequence ID: KT598241.1 Length: 2385 Number of Matches: 3

Range 1: 1811 to 2041 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
74.4 bits(156) 0.0 28/77(36%) 0/77(0%) Plus/Plus
Query      301  EELKVAEIIQQNKATRKFKASGDFVSWIEEKYGVTWRHLGKQQAASLFAAANLMEGGAKANVQHQAALVSASQSIFS  531
                EE  VA ++ + +  ++FKAS D+++ +E+KY V W+  GK++AA+  AA+N++ G A  ++QH+   V+  Q+++S
Subject   1811  EEDLVARVLLEGRIVKRFKASTDYITRVEDKYQVRWKKDGKREAAAAIAASNIVGGSATTSLQHEQLEVAVLQAVWS  2041

Range 2: 1514 to 1651 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.0 bits(118) 0.0 22/46(48%) 0/46(0%) Plus/Plus
Query        4  GNVEANKPSVAAQRVTEFYSQWAMLARRGMDRQFCQRVFEQLAIFE  141
                GNVE N  S  + R+ E Y  ++ LARRG+ R+ CQ  FE+LA++E
Subject   1514  GNVENNIASAGSTRIRELYESFSTLARRGLSRRMCQFFFERLAVYE  1651

Range 3: 1667 to 1756 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
36.3 bits(73) 0.0 14/30(47%) 0/30(0%) Plus/Plus
Query      160  VGKHTVLRFLYGTKRGTGLGLYPIAEMPDL  249
                +G+  VL +LY +K   GL LYPI  MP +
Subject   1667  LGRRRVLTYLYTSKEQGGLALYPIEHMPPI  1756

Sclerotinia sclerotiorum botybirnavirus 1 segment 1, complete sequence

Sequence ID: KP774592.1 Length: 6457 Number of Matches: 3

Range 1: 5719 to 5940 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
69.8 bits(146) 0.0 31/74(42%) 0/74(0%) Plus/Plus
Query      310  KVAEIIQQNKATRKFKASGDFVSWIEEKYGVTWRHLGKQQAASLFAAANLMEGGAKANVQHQAALVSASQSIFS  531
                + AEII + K   +FKAS D+V    ++Y VTWRH GK +A +  AA N++EG      QH    V+   S FS
Subject   5719  RAAEIIFEQKVYGRFKASRDYVDDTTKRYNVTWRHQGKARATATIAAQNVVEGNKTTQTQHSELEVAVLLSSFS  5940

Range 2: 5416 to 5556 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.4 bits(95) 0.0 19/47(40%) 0/47(0%) Plus/Plus
Query        4  GNVEANKPSVAAQRVTEFYSQWAMLARRGMDRQFCQRVFEQLAIFEI  144
                GNVE+N  S  A R+ E Y  ++ L  R    + CQ  FE LA++E+
Subject   5416  GNVESNIASAGAVRLRELYESFSTLRLRHFKPEMCQYYFEDLAVYEV  5556

Range 3: 5557 to 5652 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
42.8 bits(87) 0.0 16/32(50%) 0/32(0%) Plus/Plus
Query      148  KDNKVGKHTVLRFLYGTKRGTGLGLYPIAEMP  243
                K  K+G+  VLR+LY ++   G+GLYPI +MP
Subject   5557  KHGKLGRVKVLRYLYSSRDQMGMGLYPIHQMP  5652