This html page seems to have been stripped by Galaxy.
Disable Galaxy's html sanitization feature to view the full page (see sanitize_all_html in your galaxy's universe_wsgi.ini), or download this page instead of viewing it in Galaxy.

Nucleotide Sequence (354 letters)

Query ID:ds2016-133_14
Query definition:No definition line
Query length:603
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 1 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
36
72
108
144
180
216
252
288
324
354

Descriptions

Sequences producing significant alignments:

Description Max score Total score Query cover E value Ident Accession
57.4 57.4 14% 8.356e-07 53% AY368590.1
56.1 56.1 14% 2.167e-06 53% KX274275.1
66.1 364.7 11% 2.001e-09 69% JX904130.1
62.0 284.8 8% 3.489e-08 79% KJ716849.1

Alignments

Rupestris stem pitting associated virus strain Syrah, complete genome

Sequence ID: AY368590.1 Length: 8742 Number of Matches: 1

Range 1: 1831 to 1977 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.4 bits(119) 0.0 26/49(53%) 0/49(0%) Minus/Plus
Query      206  VNLKFLKGSETSFVELSSEVARLYKSVSVARVRPRTSKGITDLLLPQTS  352
                +NLKFLKGSETSFVELS  VA+LYKSV +    P    G+  + +  +S
Subject   1831  INLKFLKGSETSFVELSCGVAKLYKSVILQVSSPNALSGLARVYVDHSS  1977

Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome

Sequence ID: KX274275.1 Length: 8724 Number of Matches: 1

Range 1: 1831 to 1977 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.1 bits(116) 0.0 26/49(53%) 0/49(0%) Minus/Plus
Query      206  VNLKFLKGSETSFVELSSEVARLYKSVSVARVRPRTSKGITDLLLPQTS  352
                VNLKFLK  ETSFVELS  VA+LYKSV +  + P  S G+  + +  +S
Subject   1831  VNLKFLKCGETSFVELSCGVAKLYKSVILQVLSPDASSGLAKVYIDHSS  1977

Uncultured marine virus clone SOG02701, complete genome

Sequence ID: JX904130.1 Length: 1326 Number of Matches: 6

Range 1: 286 to 420 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
66.1 bits(138) 0.0 31/45(69%) 0/45(0%) Minus/Plus
Query      173  LSSEVARLYKSVSVARVRPRTSKGITDLLLPQTSLA*AAIVPLRS  307
                L S+  +L + VSV R+RPRTSKGITDLLLPQTS  *  IVPLRS
Subject    286  LLSQDGQLVQLVSVTRMRPRTSKGITDLLLPQTSTG*TPIVPLRS  420

Range 2: 286 to 417 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
65.7 bits(137) 0.0 31/44(70%) 0/44(0%) Plus/Minus
Query      176  S*RDYGRLGQGSLRQ*QVCDALRCSGPHARYTDRLVKPSHLTRE  307
                S*RDY     GSLRQ*QVCDAL CSGPH RYTD L K S L +E
Subject    286  S*RDYRCSTGGSLRQ*QVCDALGCSGPHPRYTDELNKLSILAQE  417

Range 3: 321 to 431 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.0 bits(129) 0.0 27/37(73%) 0/37(0%) Minus/Plus
Query      162  QCSARAAQNI*GHHRPVIASNFLGLSGHSPSKKLAAE  272
                QC+A AAQNI GHHRPVIASNF  L+  SPSKKL A+
Subject    321  QCNADAAQNIQGHHRPVIASNFHRLNTDSPSKKLPAD  431

Range 4: 317 to 430 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
59.3 bits(123) 0.0 27/38(71%) 0/38(0%) Plus/Minus
Query      163  SAASFLEGLWPLRPRKFEAITGL*CP*MFWAARALH*Q  276
                SA +FLEGL      KFEAITGL*CP MFWAA ALH*+
Subject    317  SAGNFLEGLSVFNRWKFEAITGL*CPWMFWAASALH*R  430

Range 5: 320 to 418 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.8 bits(122) 0.0 26/33(79%) 0/33(0%) Minus/Plus
Query      175  SV*RACGPEHLRASQTCYCLKLPWPKRP*SL*E  273
                SV*R CGPEH RASQTCYCLKLP  +  *SL*E
Subject    320  SV*RGCGPEHPRASQTCYCLKLPPVEHR*SL*E  418

Range 6: 330 to 422 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
52.8 bits(109) 0.0 24/31(77%) 0/31(0%) Plus/Minus
Query      171  QLLRGTMAA*AKEV*GNNRSVMPLDVLGRTR  263
                QLLRGT+     EV*GNNRSVMPLDVLGR R
Subject    330  QLLRGTIGVQPVEV*GNNRSVMPLDVLGRIR  422

Ngari virus strain Adrar segment M, complete sequence

Sequence ID: KJ716849.1 Length: 4507 Number of Matches: 5

Range 1: 4428 to 4505 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
62.0 bits(129) 0.0 24/26(92%) 0/26(0%) Plus/Minus
Query       48  LDSMGGGAWPFLVGGAICLVNSVNER  125
                LDS+GGGAWPFLVGGAICLVNS NER
Subject   4428  LDSVGGGAWPFLVGGAICLVNSDNER  4505

Range 2: 4427 to 4507 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
57.0 bits(118) 0.0 23/27(85%) 0/27(0%) Plus/Minus
Query       46  FLILWEVVHGRS*LVERFVWLIPLTNE  126
                F I W VVHGRS*LVERFVWLIP+TNE
Subject   4427  FSIPWVVVHGRS*LVERFVWLIPITNE  4507

Range 3: 4429 to 4500 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.5 bits(117) 0.0 22/24(92%) 0/24(0%) Plus/Minus
Query       53  FYGRWCMAVLSWWSDLSG*FR*RT  124
                F G WCMAVLSWWSDLSG*FR*RT
Subject   4429  FRGWWCMAVLSWWSDLSG*FR*RT  4500

Range 4: 4419 to 4505 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
55.6 bits(115) 0.0 23/29(79%) 0/29(0%) Minus/Plus
Query       48  AEVSFVNGINQTNRSTN*ERPCTTSHRIK  134
                A  SFV GINQTNRSTN*ERPCTT+H I+
Subject   4419  AHYSFVIGINQTNRSTN*ERPCTTTHGIE  4505

Range 5: 4427 to 4507 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.8 bits(111) 0.0 23/27(85%) 0/27(0%) Minus/Plus
Query       46  LVR*RN*PDKSLHQLRTAMHHLP*NQE  126
                LVR RN*PDKSLHQLRTAMHH P N+E
Subject   4427  LVRYRN*PDKSLHQLRTAMHHHPRNRE  4507