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Nucleotide Sequence (447 letters)

Query ID:ds2015-149_49
Query definition:No definition line
Query length:122
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 1 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
45
90
135
180
225
270
315
360
405
447

Descriptions

Alignments

UNVERIFIED: Uncultured marine virus clone N702P_459 photosystem II protein D1 like (psbA) gene, partial sequence

Sequence ID: GU940518.1 Length: 999 Number of Matches: 3

Range 1: 205 to 297 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.0 bits(153) 0.0 28/31(90%) 0/31(0%) Plus/Plus
Query      355  FLIYPIGQGSFSDGMPLGISGTFNFMIVFQA  447
                FL+YP GQGSFSDGMPLGISGTFNFM VFQA
Subject    205  FLVYPFGQGSFSDGMPLGISGTFNFMFVFQA  297

Range 2: 39 to 119 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
23.1 bits(44) 0.0 10/27(37%) 0/27(0%) Plus/Plus
Query      125  WTVGAMIYFTGEVSGSSPGWPSCAREK  205
                WT G+ ++     S S P W  C R K
Subject     39  WTSGSTMWTIPVNSLSFPYWCCCIRRK  119

Range 3: 204 to 296 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
58.3 bits(121) 0.0 25/31(81%) 0/31(0%) Minus/Minus
Query      354  AWNTIMKLKVPEIPRGIPSEKLP*PIG*IKK  446
                AWNT MKLKVPEIPRGIPS KLP P G* +K
Subject    204  AWNTNMKLKVPEIPRGIPSLKLPCPKG*TRK  296

Uncultured marine virus clone G_C3 photosystem II protein D1 (psbA) gene, partial cds

Sequence ID: EU727820.1 Length: 618 Number of Matches: 1

Range 1: 193 to 285 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.8 bits(159) 0.0 29/31(94%) 0/31(0%) Plus/Plus
Query      355  FLIYPIGQGSFSDGMPLGISGTFNFMIVFQA  447
                FLIYP+GQGSFSDGMPLGISGTFNFM+VFQA
Subject    193  FLIYPVGQGSFSDGMPLGISGTFNFMLVFQA  285

Uncultured marine virus clone K_H9 photosystem II protein D1 (psbA) gene, partial cds

Sequence ID: EU728043.1 Length: 723 Number of Matches: 2

Range 1: 193 to 285 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
75.3 bits(158) 0.0 28/31(90%) 0/31(0%) Plus/Plus
Query      355  FLIYPIGQGSFSDGMPLGISGTFNFMIVFQA  447
                FL+YP+GQGSFSDGMPLGISGTFNFM+VFQA
Subject    193  FLVYPVGQGSFSDGMPLGISGTFNFMLVFQA  285

Range 2: 192 to 284 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
53.8 bits(111) 0.0 22/31(71%) 0/31(0%) Minus/Minus
Query      354  AWNTIMKLKVPEIPRGIPSEKLP*PIG*IKK  446
                AW T +KL VPE+P GIPSEKLP P G* KK
Subject    192  AWKTSIKLNVPEMPSGIPSEKLPCPTG*TKK  284

Uncultured marine virus clone G_E2 photosystem II protein D1 (psbA) gene, partial cds

Sequence ID: EU727840.1 Length: 621 Number of Matches: 1

Range 1: 193 to 285 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
74.4 bits(156) 0.0 28/31(90%) 0/31(0%) Plus/Plus
Query      355  FLIYPIGQGSFSDGMPLGISGTFNFMIVFQA  447
                FLIYP+GQGSF+DGMPLGISGTFNFM+VFQA
Subject    193  FLIYPVGQGSFNDGMPLGISGTFNFMLVFQA  285

Uncultured cyanophage clone PW DA I 73 protein D1 (psbA) gene, partial cds

Sequence ID: KP729723.1 Length: 795 Number of Matches: 3

Range 1: 275 to 367 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
73.9 bits(155) 0.0 28/31(90%) 0/31(0%) Plus/Plus
Query      355  FLIYPIGQGSFSDGMPLGISGTFNFMIVFQA  447
                FL+YP GQGSFSDGMPLGISGTFNFM+VFQA
Subject    275  FLVYPFGQGSFSDGMPLGISGTFNFMLVFQA  367

Range 2: 292 to 366 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.2 bits(101) 0.0 17/25(68%) 0/25(0%) Plus/Plus
Query      372  WSRKLF*WYASRNLWYFQLHDCIPG  446
                W+R L *WYA+RN WYF LH C PG
Subject    292  WTRFLL*WYAARN*WYF*LHACFPG  366

Range 3: 277 to 366 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.8 bits(98) 0.0 21/30(70%) 0/30(0%) Minus/Minus
Query      357  AWNTIMKLKVPEIPRGIPSEKLP*PIG*IK  446
                AW T MKLKVP IP GIPSEK P P G* +
Subject    277  AWKTSMKLKVPLIPSGIPSEKEPCPKG*TR  366