Queries
Nucleotide Sequence (603 letters)
Query ID: | ds2016-133_14 |
Query definition: | No definition line |
Query length: | 603 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
462.0 | 2554.2 | 30% | 3.063e-128 | 92% | KX274274.1 | |
456.1 | 2391.5 | 30% | 1.903e-126 | 86% | KT948710.1 | |
454.7 | 2342.5 | 33% | 4.933e-126 | 84% | AB277787.1 | |
454.7 | 2357.6 | 33% | 4.933e-126 | 84% | KX958435.1 | |
452.4 | 2354.4 | 30% | 2.414e-125 | 83% | AY881627.1 |
Alignments
Grapevine rupestris stem pitting associated virus isolate SK704 A, complete genome
Sequence ID: KX274274.1 Length: 8725 Number of Matches: 7
Range 1: 6355 to 6954 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
462.0 bits(1002) | 0.0 | 195/200(98%) | 0/200(0%) | Minus/Plus |
Query 3 MGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWRDVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNISVPREAHFIKTKTCRC*HQTC 602 MGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWR VSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNISVPREAHFIKTKTCR TC Subject 6355 MGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWRGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNISVPREAHFIKTKTCRFGANTC 6954
Range 2: 6355 to 6954 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
457.9 bits(993) | 0.0 | 185/200(92%) | 0/200(0%) | Plus/Minus |
Query 3 AGLVLTPASFGLYEVCLPWNADVLVRV*EQHIKTMNV*DRQVLIKYIYLPLHCTPWRVGLDVPSC*IWTVWYTGCKSHERLVFRNELPY*ATFTATWNTMNNNWKFKHAEHTNKFEC*QSLD*VIHNTHITPNT*GLNNNLKQTRN*APHFVLIPNQETHAVIMRFNFLLSHHAYR*FSKSIGIRHLNCIIINAIFQIAH 602 AG+ PASFGLYEVCLPWNADVLVRV*EQHIKTMN+ DRQVLIKY+YLPLHCTPWRVGLDVPSC*IWTVW+T CKSHERLVFRNELPY*AT TATWNTMNNNWKFKHAEHTNKF+C*QSLD*VIHNTH TPNT*GLNN+LKQTRN*APHFVLIPNQETHAVIMRFNFLLSHHAY *FSK IGIRHLNCIIINAIFQIAH Subject 6355 AGVSTKPASFGLYEVCLPWNADVLVRV*EQHIKTMNIRDRQVLIKYVYLPLHCTPWRVGLDVPSC*IWTVWHTCCKSHERLVFRNELPY*ATLTATWNTMNNNWKFKHAEHTNKFKC*QSLD*VIHNTHTTPNT*GLNNDLKQTRN*APHFVLIPNQETHAVIMRFNFLLSHHAYG*FSKPIGIRHLNCIIINAIFQIAH 6954
Range 3: 6356 to 6955 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
441.9 bits(958) | 0.0 | 187/200(94%) | 0/200(0%) | Plus/Minus |
Query 2 CRFGANTCKFWSL*SVPPLER*CSGKGLRTAHQNHECLRQTSTHQVYLSSLALHTLESRA*CTFLLDLDCLVHRL*KPRKTRLQK*APLLGYFYRYLEHYEQQLEI*ARRTHQQIRMLTKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSFCAYSEPGNARSYNALQLPPQSSRL*IILQVYRHKTPQLHNYQCNFPNCP 601 CR TCKFWSL*SVPPLER*CSGKGLRTAHQNHE RQTSTHQV LSSLALHTLESRA*CTFLLDLDCL H L*KPRKTRLQK*APLLGY YRYLEHYEQQLEI*ARRTHQQI+MLTKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSFCAYSEPGNARSYNALQLPPQSSRL IILQ YRHKTPQLHNYQCNFPNCP Subject 6356 CRC*HQTCKFWSL*SVPPLER*CSGKGLRTAHQNHEYQRQTSTHQVCLSSLALHTLESRA*CTFLLDLDCLAHLL*KPRKTRLQK*APLLGYSYRYLEHYEQQLEI*ARRTHQQIQMLTKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSFCAYSEPGNARSYNALQLPPQSSRLWIILQAYRHKTPQLHNYQCNFPNCP 6955
Range 4: 6356 to 6955 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
409.3 bits(887) | 0.0 | 185/200(92%) | 0/200(0%) | Minus/Plus |
Query 2 WAIWKIALIIMQLRCLMPIDLENYL*A**LRRKLKRIITACVSWFGISTK*GAQFLVCLRLLFRP*VFGVM*VL*IT*SRLCQHSNLLVCSACLNFQLLFIVFQVAVKVA**GSSFLKTSLSWLLQPVYQTVQI*QEGTSSPTLQGVQCKGR*IYLMSTCLSQTFMVLMCCSQTLTRTSAFQGRHTS*RPKLAGVSTKPA 601 WAIWKIALIIMQLRCLMPI LENY *A**LRRKLKRIITACVSWFGISTK*GAQFLVCLR LFRP*VFGV+*VL*IT*SRLCQH NLLVCSACLNFQLLFIVFQVAV+VA**GSSFLKTSLSWLLQ V QTVQI*QEGTSSPTLQGVQCKGR* YLMSTCLS FMVLMCCSQTLTRTSAFQGRHTS*RPKLAG+ PA Subject 6356 WAIWKIALIIMQLRCLMPIGLENYP*A**LRRKLKRIITACVSWFGISTK*GAQFLVCLRSLFRP*VFGVV*VL*IT*SRLCQHLNLLVCSACLNFQLLFIVFQVAVRVA**GSSFLKTSLSWLLQQVCQTVQI*QEGTSSPTLQGVQCKGR*TYLMSTCLSLIFMVLMCCSQTLTRTSAFQGRHTS*RPKLAGLVLTPA 6955
Range 5: 6354 to 6956 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
403.8 bits(875) | 0.0 | 187/201(93%) | 0/201(0%) | Minus/Plus |
Query 1 NGQFGKLH**LCN*GVLCL*TWRIIYRRDD*GGS*SAL*LRAFPGSE*AQNEVLNFWFV*GYCLGLKCLA*CEYYE*LSQGFVSIRICWCVLRA*IXXXXXXXSR*R*K*PNKGAHF*RRVFRGFYSRCTRQSKSNRKVHQALLSRVCSAREDKYT**VLVCLRHSWF*CAVLRPLPEHQRSKGGTLHKDQNLQVLAPNLQ 603 NGQFGKLH**LCN*GVLCL* WRII+RRDD*GGS*SAL*LRAFPGSE*AQNEVLNFWFV*G+CLGLKCLA CEYYE*LSQGFVSI ICWCVLRA*ISSCCS*CSR*R*+*PNKGAHF*RRVFRGFYSRC RQSKSNRKVHQALLSRVCSAREDK+T**VLVCL +SWF*CAVLRPLPEHQRSKGGTLHKDQNLQV +LQ Subject 6354 NGQFGKLH**LCN*GVLCL*AWRIIHRRDD*GGS*SAL*LRAFPGSE*AQNEVLNFWFV*GHCLGLKCLAWCEYYE*LSQGFVSI*ICWCVLRA*ISSCCS*CSR*R*E*PNKGAHF*RRVFRGFYSRCARQSKSNRKVHQALLSRVCSAREDKHT**VLVCL*YSWF*CAVLRPLPEHQRSKGGTLHKDQNLQVWC*HLQ 6956
Range 6: 6684 to 6956 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
195.8 bits(421) | 0.0 | 85/91(93%) | 0/91(0%) | Plus/Minus |
Query 1 LQVWC*HLQVLVFMKCASLGTLMFW*GSENSTSKP*MSETDKYSSSIFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR 273 LQV +LQVLVFMKCASLGTLMFW*GSENSTSKP*+SETDKYSSS+FIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR Subject 6684 LQVLAPNLQVLVFMKCASLGTLMFW*GSENSTSKP*ISETDKYSSSMFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR 6956
Range 7: 6354 to 6614 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
183.4 bits(394) | 0.0 | 84/87(97%) | 0/87(0%) | Plus/Minus |
Query 343 NSNADKALTKLFIILTSRQTLKA*TITSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPI 603 NSNADKALTKLFIILT RQTLKA*T+TSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITP+DNSPSL*A*DTSIA*LSMQFSKLPI Subject 6354 NSNADKALTKLFIILTPRQTLKA*TMTSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITPMDNSPSL*A*DTSIA*LSMQFSKLPI 6614
Grapevine rupestris stem pitting associated virus isolate VF1, partial genome
Sequence ID: KT948710.1 Length: 8716 Number of Matches: 7
Range 1: 6356 to 6955 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
456.1 bits(989) | 0.0 | 193/200(96%) | 0/200(0%) | Minus/Plus |
Query 3 MGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWRDVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNISVPREAHFIKTKTCRC*HQTC 602 MGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWR VSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGC VQGKINILDEYLSVSDI GFDVLFSDPYQNISVPREAHFIKTKTCR TC Subject 6356 MGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWRGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCVVQGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKTKTCRFGANTC 6955
Range 2: 6356 to 6955 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
425.8 bits(923) | 0.0 | 171/200(86%) | 0/200(0%) | Plus/Minus |
Query 3 AGLVLTPASFGLYEVCLPWNADVLVRV*EQHIKTMNV*DRQVLIKYIYLPLHCTPWRVGLDVPSC*IWTVWYTGCKSHERLVFRNELPY*ATFTATWNTMNNNWKFKHAEHTNKFEC*QSLD*VIHNTHITPNT*GLNNNLKQTRN*APHFVLIPNQETHAVIMRFNFLLSHHAYR*FSKSIGIRHLNCIIINAIFQIAH 602 AG+ PASFGLYEVCLPWNADVLV V*EQHIKT N+ DRQVLIKYIYLPLH TPWRVGLDVPSC IWTVWYT CKSH+RLV RN+LPY* TFTATWNTMNNNWKFKH EHTNKF+C QSLD*VIHNTH TPNT*GLNNNLKQTRN*APHF+LI NQETH VIMR NFLLSHH YR FSKS+ IRHLNCI+INAI QIAH Subject 6356 AGVSTKPASFGLYEVCLPWNADVLVGV*EQHIKTRNIRDRQVLIKYIYLPLHYTPWRVGLDVPSCKIWTVWYTRCKSHKRLVLRNKLPY*TTFTATWNTMNNNWKFKHTEHTNKFKCRQSLD*VIHNTHTTPNT*GLNNNLKQTRN*APHFMLISNQETHTVIMRLNFLLSHHTYRQFSKSVSIRHLNCIVINAILQIAH 6955
Range 3: 6357 to 6956 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
398.3 bits(863) | 0.0 | 171/200(86%) | 0/200(0%) | Plus/Minus |
Query 2 CRFGANTCKFWSL*SVPPLER*CSGKGLRTAHQNHECLRQTSTHQVYLSSLALHTLESRA*CTFLLDLDCLVHRL*KPRKTRLQK*APLLGYFYRYLEHYEQQLEI*ARRTHQQIRMLTKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSFCAYSEPGNARSYNALQLPPQSSRL*IILQVYRHKTPQLHNYQCNFPNCP 601 CR TCKFWSL*SVPPLER*CSG+GLRTAHQN + RQT THQVYLSSLALHTLESRA*CTFL DLDCLVH L*KP+KTR QK*APLL YFYRYLEHYEQQLEI*A RTHQQI+M TKP*LSYS*YSHHAKHLRPKQ*PQT+QKLSTSF AY EPGNA SYNA QLPPQSS L* ILQV +HKTPQLH+YQCN PNCP Subject 6357 CRC*HQTCKFWSL*SVPPLER*CSGRGLRTAHQNQKYQRQTGTHQVYLSSLALHTLESRA*CTFL*DLDCLVHPL*KPQKTRPQK*APLLDYFYRYLEHYEQQLEI*AHRTHQQIQMQTKP*LSYS*YSHHAKHLRPKQ*PQTDQKLSTSFYAYFEPGNAHSYNAPQLPPQSSHL*TILQVCKHKTPQLHSYQCNSPNCP 6956
Range 4: 6357 to 6956 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
375.0 bits(812) | 0.0 | 171/200(86%) | 0/200(0%) | Minus/Plus |
Query 2 WAIWKIALIIMQLRCLMPIDLENYL*A**LRRKLKRIITACVSWFGISTK*GAQFLVCLRLLFRP*VFGVM*VL*IT*SRLCQHSNLLVCSACLNFQLLFIVFQVAVKVA**GSSFLKTSLSWLLQPVYQTVQI*QEGTSSPTLQGVQCKGR*IYLMSTCLSQTFMVLMCCSQTLTRTSAFQGRHTS*RPKLAGVSTKPA 601 WAIW+IALI MQLRCLM DLEN L* **LRRKL+RIIT CVSWF IS K*GAQFLVCLRLLFRP*VFGV+*VL*IT*SRLC H NLLVCS CLNFQLLFIVFQVAVKV **GS FL+TSL WLLQ VYQTVQI QEGTSSPTLQGV CKGR*IYLMSTCLS F+VLMCCSQT TRTSAFQGRHTS*RPKLAG+ PA Subject 6357 WAIWRIALITMQLRCLMLTDLENCL*V**LRRKLRRIITVCVSWFEISIK*GAQFLVCLRLLFRP*VFGVV*VL*IT*SRLCLHLNLLVCSVCLNFQLLFIVFQVAVKVV**GSLFLRTSLLWLLQRVYQTVQILQEGTSSPTLQGV*CKGR*IYLMSTCLSLIFLVLMCCSQTPTRTSAFQGRHTS*RPKLAGLVLTPA 6956
Range 5: 6355 to 6957 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
361.7 bits(783) | 0.0 | 174/201(87%) | 0/201(0%) | Minus/Plus |
Query 1 NGQFGKLH**LCN*GVLCL*TWRIIYRRDD*GGS*SAL*LRAFPGSE*AQNEVLNFWFV*GYCLGLKCLA*CEYYE*LSQGFVSIRICWCVLRA*IXXXXXXXSR*R*K*PNKGAHF*RRVFRGFYSRCTRQSKSNRKVHQALLSRVCSAREDKYT**VLVCLRHSWF*CAVLRPLPEHQRSKGGTLHKDQNLQVLAPNLQ 603 NGQFG+LH**LCN*GVLCL TWRI+YR DD*GGS* AL*L AFPGS+*A NEVLNFW V*GYCLGLKCLA CEYYE*LSQGFV I ICWCVL A*ISSCCS*CSR*R*K* NKGA+F* RVF GFYS CTRQSKS RKVHQALLSRVCSAREDKYT**V VCL + WF*CAVLRPLPEHQRSKGGTLHKDQNLQV +LQ Subject 6355 NGQFGELH**LCN*GVLCLQTWRIVYRCDD*GGS*GAL*LCAFPGSK*A*NEVLNFWSV*GYCLGLKCLAWCEYYE*LSQGFVCI*ICWCVLCA*ISSCCS*CSR*R*K*SNKGAYF*GRVFCGFYSGCTRQSKSYRKVHQALLSRVCSAREDKYT**VPVCL*YFWF*CAVLRPLPEHQRSKGGTLHKDQNLQVWC*HLQ 6957
Range 6: 6685 to 6957 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
189.8 bits(408) | 0.0 | 82/91(90%) | 0/91(0%) | Plus/Minus |
Query 1 LQVWC*HLQVLVFMKCASLGTLMFW*GSENSTSKP*MSETDKYSSSIFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR 273 LQV +LQVLVFMKCASLGTLMFW*GSENSTSKP +SETD+YSSSIFIFPCT HPGE*GLMYLPVRFGLSGTPAVKATKDSSSE+SSLIR Subject 6685 LQVLAPNLQVLVFMKCASLGTLMFW*GSENSTSKPEISETDRYSSSIFIFPCTTHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEISSLIR 6957
Range 7: 6355 to 6615 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
184.8 bits(397) | 0.0 | 85/87(98%) | 0/87(0%) | Plus/Minus |
Query 343 NSNADKALTKLFIILTSRQTLKA*TITSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPI 603 NSNADKALTKLFIILT RQTLKA*TITSN+PEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPI Subject 6355 NSNADKALTKLFIILTPRQTLKA*TITSNRPEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPI 6615
Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: Hai1
Sequence ID: AB277787.1 Length: 2876 Number of Matches: 7
Range 1: 611 to 1210 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
454.7 bits(986) | 0.0 | 191/200(96%) | 0/200(0%) | Minus/Plus |
Query 3 MGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWRDVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNISVPREAHFIKTKTCRC*HQTC 602 MGNLENCIDNYAIEVSYAYRLGELSIGVMTEEE+EAHYNCVRFLVRNKHKMRCSIS LFEVIV*ALSVWR VSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDI GFDVLFSDPYQNIS+PREAHFIKTKTCR +TC Subject 611 MGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEIEAHYNCVRFLVRNKHKMRCSISSLFEVIV*ALSVWRGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDISGFDVLFSDPYQNISIPREAHFIKTKTCRFGAKTC 1210
Range 2: 611 to 1210 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
418.0 bits(906) | 0.0 | 168/200(84%) | 0/200(0%) | Plus/Minus |
Query 3 AGLVLTPASFGLYEVCLPWNADVLVRV*EQHIKTMNV*DRQVLIKYIYLPLHCTPWRVGLDVPSC*IWTVWYTGCKSHERLVFRNELPY*ATFTATWNTMNNNWKFKHAEHTNKFEC*QSLD*VIHNTHITPNT*GLNNNLKQTRN*APHFVLIPNQETHAVIMRFNFLLSHHAYR*FSKSIGIRHLNCIIINAIFQIAH 602 AG PASFGLYEVCLPWNADVLV V*EQHIKT N+ DRQVLIKYIYLPLHCTPWRVGLDVPSC*IWTVW+T CKSH+R V RN+LPY*ATFT TWNTMNNNWKFK+ EH NKF+C QSLD*VIHNTH TPNT*GLN N KQTRN* PHF+LI NQETH VIMRFNFLLSHH R FSKS+ IRHLNCIIINAIFQIAH Subject 611 AGFSTKPASFGLYEVCLPWNADVLVGV*EQHIKTRNIRDRQVLIKYIYLPLHCTPWRVGLDVPSC*IWTVWHTRCKSHKRFVLRNKLPY*ATFTTTWNTMNNNWKFKYTEHANKFKCRQSLD*VIHNTHTTPNT*GLNYNFKQTRN*TPHFMLISNQETHTVIMRFNFLLSHHTNRQFSKSVSIRHLNCIIINAIFQIAH 1210
Range 3: 612 to 1211 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
388.3 bits(841) | 0.0 | 167/200(84%) | 0/200(0%) | Plus/Minus |
Query 2 CRFGANTCKFWSL*SVPPLER*CSGKGLRTAHQNHECLRQTSTHQVYLSSLALHTLESRA*CTFLLDLDCLVHRL*KPRKTRLQK*APLLGYFYRYLEHYEQQLEI*ARRTHQQIRMLTKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSFCAYSEPGNARSYNALQLPPQSSRL*IILQVYRHKTPQLHNYQCNFPNCP 601 CRF TCKFWSL*SVPPLE *CSG+GLRTAHQN + RQTSTHQVYLSSLALHTLESRA*CTFLLDLDCL H L*KP+K R QK*APLLGYFY YLEHYEQQLEI* RT QQI+M TKP*LSYS*YSHHAKHLRPK * QTN KL+TSF AY EPGNA SYNALQ PPQSS * ILQV +HKTPQLHNYQCNFPNCP Subject 612 CRF*HQTCKFWSL*SVPPLEC*CSGRGLRTAHQNQKYQRQTSTHQVYLSSLALHTLESRA*CTFLLDLDCLAHPL*KPQKIRPQK*APLLGYFYHYLEHYEQQLEI*VHRTRQQIQMQTKP*LSYS*YSHHAKHLRPKL*LQTN*KLNTSFYAYFEPGNAHSYNALQFPPQSSHQ*TILQVCKHKTPQLHNYQCNFPNCP 1211
Range 4: 612 to 1211 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
367.6 bits(796) | 0.0 | 169/200(84%) | 0/200(0%) | Minus/Plus |
Query 2 WAIWKIALIIMQLRCLMPIDLENYL*A**LRRKLKRIITACVSWFGISTK*GAQFLVCLRLLFRP*VFGVM*VL*IT*SRLCQHSNLLVCSACLNFQLLFIVFQVAVKVA**GSSFLKTSLSWLLQPVYQTVQI*QEGTSSPTLQGVQCKGR*IYLMSTCLSQTFMVLMCCSQTLTRTSAFQGRHTS*RPKLAGVSTKPA 601 WAIWKIALIIMQLRCLM DLEN L **LRRKLKRIIT CVSWF IS K*G QFLVCL+L FRP*VFGV+*VL*IT*SRLC H NLL CS LNFQLLFIVFQV VKVA**GS FL+T+L WLLQ V QTVQI*QEGTSSPTLQGVQCKGR*IYLMSTCLS F+VLMCCSQT TRTSAFQGRHTS*RPKLAG+ KPA Subject 612 WAIWKIALIIMQLRCLMLTDLENCLLV**LRRKLKRIITVCVSWFEISIK*GVQFLVCLKL*FRP*VFGVV*VL*IT*SRLCLHLNLLACSVYLNFQLLFIVFQVVVKVA**GSLFLRTNLLWLLQRVCQTVQI*QEGTSSPTLQGVQCKGR*IYLMSTCLSLIFLVLMCCSQTPTRTSAFQGRHTS*RPKLAGLVLKPA 1211
Range 5: 940 to 1212 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
190.3 bits(409) | 0.0 | 83/91(91%) | 0/91(0%) | Plus/Minus |
Query 1 LQVWC*HLQVLVFMKCASLGTLMFW*GSENSTSKP*MSETDKYSSSIFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR 273 LQV +LQVLVFMKCASLG LMFW*GSENSTSKP +SETDKYSSSIFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSE+SSLIR Subject 940 LQVLAPNLQVLVFMKCASLGMLMFW*GSENSTSKPEISETDKYSSSIFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEISSLIR 1212
Range 6: 610 to 870 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
178.9 bits(384) | 0.0 | 84/87(97%) | 0/87(0%) | Plus/Minus |
Query 343 NSNADKALTKLFIILTSRQTLKA*TITSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPI 603 NSNADKALTKLFIILT RQTLKA*TITSNK EIEHLILCLFRTRKRTQL*CAS SSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPI Subject 610 NSNADKALTKLFIILTPRQTLKA*TITSNKLEIEHLILCLFRTRKRTQL*CASISSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPI 870
Range 7: 610 to 1212 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
344.7 bits(746) | 0.0 | 169/201(84%) | 0/201(0%) | Minus/Plus |
Query 1 NGQFGKLH**LCN*GVLCL*TWRIIYRRDD*GGS*SAL*LRAFPGSE*AQNEVLNFWFV*GYCLGLKCLA*CEYYE*LSQGFVSIRICWCVLRA*IXXXXXXXSR*R*K*PNKGAHF*RRVFRGFYSRCTRQSKSNRKVHQALLSRVCSAREDKYT**VLVCLRHSWF*CAVLRPLPEHQRSKGGTLHKDQNLQVLAPNLQ 603 NGQFGKLH**LCN*GVLCL TWRI+Y DD*GG+*SAL*L AFPGS+*A NEV NF FV* Y LGLKCLA CEYYE*LSQGFV I ICW VL *ISSCCS*CSR* *K*PNKGA+F* R+F GFYS C RQSKSNRKVHQALLSRVCSAREDKYT**VLVCL + WF*CAVLRPLPEHQ SKGGTLHKDQNLQV NLQ Subject 610 NGQFGKLH**LCN*GVLCLQTWRIVYWCDD*GGN*SAL*LCAFPGSK*A*NEVFNF*FV*SYSLGLKCLAWCEYYE*LSQGFVCI*ICWRVLCT*ISSCCS*CSR*W*K*PNKGAYF*GRIFCGFYSGCARQSKSNRKVHQALLSRVCSAREDKYT**VLVCL*YFWF*CAVLRPLPEHQHSKGGTLHKDQNLQVWC*NLQ 1212
Grapevine rupestris stem pitting associated virus isolate CS BR, complete genome
Sequence ID: KX958435.1 Length: 8743 Number of Matches: 7
Range 1: 6356 to 6955 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
454.7 bits(986) | 0.0 | 191/200(96%) | 0/200(0%) | Minus/Plus |
Query 3 MGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWRDVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNISVPREAHFIKTKTCRC*HQTC 602 MGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWR VSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQG+INILDEYLSVSDI GFDVLFSDPYQNI++PREAHFIKTKTCR TC Subject 6356 MGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWRGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGRINILDEYLSVSDISGFDVLFSDPYQNINIPREAHFIKTKTCRFGANTC 6955
Range 2: 6356 to 6955 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
419.9 bits(910) | 0.0 | 167/200(84%) | 0/200(0%) | Plus/Minus |
Query 3 AGLVLTPASFGLYEVCLPWNADVLVRV*EQHIKTMNV*DRQVLIKYIYLPLHCTPWRVGLDVPSC*IWTVWYTGCKSHERLVFRNELPY*ATFTATWNTMNNNWKFKHAEHTNKFEC*QSLD*VIHNTHITPNT*GLNNNLKQTRN*APHFVLIPNQETHAVIMRFNFLLSHHAYR*FSKSIGIRHLNCIIINAIFQIAH 602 AG+ PASF LYEVCLPWN DVLV V*EQH+KT NV DRQ+LIKYIY PLHCTPWRVGLDVPSC*IWTVW+T CKSH+RLV RNELPY ATFTATWNTM+NNWKFK+ EHTNKF+C QSLD*VIHNTH TPNT*GLNNNLKQTRN*APHF+ I NQETH VIMR NFLLSHH YR FSKS+ IRHLNC+IINAIFQIAH Subject 6356 AGVSTKPASFSLYEVCLPWNVDVLVGV*EQHVKTRNVRDRQILIKYIYPPLHCTPWRVGLDVPSC*IWTVWHTRCKSHKRLVLRNELPYQATFTATWNTMDNNWKFKYTEHTNKFKCRQSLD*VIHNTHTTPNT*GLNNNLKQTRN*APHFMFISNQETHTVIMRLNFLLSHHTYRQFSKSVSIRHLNCVIINAIFQIAH 6955
Range 3: 6357 to 6956 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
389.6 bits(844) | 0.0 | 168/200(84%) | 0/200(0%) | Plus/Minus |
Query 2 CRFGANTCKFWSL*SVPPLER*CSGKGLRTAHQNHECLRQTSTHQVYLSSLALHTLESRA*CTFLLDLDCLVHRL*KPRKTRLQK*APLLGYFYRYLEHYEQQLEI*ARRTHQQIRMLTKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSFCAYSEPGNARSYNALQLPPQSSRL*IILQVYRHKTPQLHNYQCNFPNCP 601 CR TCKF SL*SVPPLE *CSG+GLRTA QN +C RQT+THQVYLSSLALHTLESRA*CTFLLDLDCL H L*KP+KTR QK*APL GYFYRYLEHY QQLEI* RTHQQI+M TKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSF Y EPGNA SYNA QLPPQSS L* ILQV +HKTPQL NYQCNFPNCP Subject 6357 CRC*HQTCKF*SL*SVPPLEC*CSGRGLRTARQNQKCQRQTNTHQVYLSSLALHTLESRA*CTFLLDLDCLAHPL*KPQKTRPQK*APLSGYFYRYLEHYGQQLEI*VHRTHQQIQMQTKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSFYVYFEPGNAHSYNAPQLPPQSSHL*TILQVCKHKTPQLRNYQCNFPNCP 6956
Range 4: 6357 to 6956 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
360.3 bits(780) | 0.0 | 168/200(84%) | 0/200(0%) | Minus/Plus |
Query 2 WAIWKIALIIMQLRCLMPIDLENYL*A**LRRKLKRIITACVSWFGISTK*GAQFLVCLRLLFRP*VFGVM*VL*IT*SRLCQHSNLLVCSACLNFQLLFIVFQVAVKVA**GSSFLKTSLSWLLQPVYQTVQI*QEGTSSPTLQGVQCKGR*IYLMSTCLSQTFMVLMCCSQTLTRTSAFQGRHTS*RPKLAGVSTKPA 601 WAIWKIALII QLRCLM DLEN L* **LRRKL+RIIT CVSWF I+ K*GAQFLVCLRLLFRP*VFGV+*VL*IT*SRLC H NLLVCS LNFQLL IVFQVAVKVA**GSSFL+TSL WLLQ V QTVQI*QEGTSSPTLQGVQCKG *IYLMS CLS TF+VL CCSQT TRTS FQGRHTS*R KLAG+ PA Subject 6357 WAIWKIALIITQLRCLMLTDLENCL*V**LRRKLRRIITVCVSWFEINIK*GAQFLVCLRLLFRP*VFGVV*VL*IT*SRLCLHLNLLVCSVYLNFQLLSIVFQVAVKVA**GSSFLRTSLLWLLQRVCQTVQI*QEGTSSPTLQGVQCKGG*IYLMSICLSLTFLVLTCCSQTPTRTSTFQGRHTS*RLKLAGLVLTPA 6956
Range 5: 6685 to 6957 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
191.2 bits(411) | 0.0 | 84/91(92%) | 0/91(0%) | Plus/Minus |
Query 1 LQVWC*HLQVLVFMKCASLGTLMFW*GSENSTSKP*MSETDKYSSSIFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR 273 LQV +LQVLVFMKCASLG LMFW*GSENSTSKP MSETDKYSSSIFI PCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR Subject 6685 LQVLAPNLQVLVFMKCASLGMLMFW*GSENSTSKPEMSETDKYSSSIFILPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR 6957
Range 6: 6355 to 6615 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
186.2 bits(400) | 0.0 | 86/87(99%) | 0/87(0%) | Plus/Minus |
Query 343 NSNADKALTKLFIILTSRQTLKA*TITSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPI 603 NSNADKALTKLFIILT RQTLKA*TITSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPI Subject 6355 NSNADKALTKLFIILTPRQTLKA*TITSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPI 6615
Range 7: 6355 to 6957 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
355.7 bits(770) | 0.0 | 171/201(85%) | 0/201(0%) | Minus/Plus |
Query 1 NGQFGKLH**LCN*GVLCL*TWRIIYRRDD*GGS*SAL*LRAFPGSE*AQNEVLNFWFV*GYCLGLKCLA*CEYYE*LSQGFVSIRICWCVLRA*IXXXXXXXSR*R*K*PNKGAHF*RRVFRGFYSRCTRQSKSNRKVHQALLSRVCSAREDKYT**VLVCLRHSWF*CAVLRPLPEHQRSKGGTLHKDQNLQVLAPNLQ 603 NGQFGKLH**L N*GVLCL TWRI+YR DD*GGS* AL*L AFPGS+* NEVLNFWFV*GYCLGLKCLA CEYYE*LSQGFV I ICWCVL *ISSCC *CSR*R*K*P+KGAHF* RVF GFYS C RQSKSNRKVHQALLSRVCSAREDKYT**V VCL H WF* AVLRPLPEHQ SKGGTLHKD NLQV +LQ Subject 6355 NGQFGKLH**LRN*GVLCLQTWRIVYRCDD*GGS*GAL*LCAFPGSK*T*NEVLNFWFV*GYCLGLKCLAWCEYYE*LSQGFVCI*ICWCVLCT*ISSCCP*CSR*R*K*PDKGAHF*GRVFCGFYSGCARQSKSNRKVHQALLSRVCSAREDKYT**VFVCL*HFWF*RAVLRPLPEHQHSKGGTLHKD*NLQVWC*HLQ 6957
Rupestris stem pitting associated virus strain BS, complete genome
Sequence ID: AY881627.1 Length: 8743 Number of Matches: 7
Range 1: 6355 to 6954 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
452.4 bits(981) | 0.0 | 191/200(96%) | 0/200(0%) | Minus/Plus |
Query 3 MGNLENCIDNYAIEVSYAYRLGELSIGVMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVIV*ALSVWRDVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDIHGFDVLFSDPYQNISVPREAHFIKTKTCRC*HQTC 602 MGNLENCIDNYAIEVSYAYRLGELS GVMTEEEVEAHYNCVRFLVRNKHKMRCSIS LFEVIV*ALSVWR VSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDI GFDVLFSDPYQNIS+PREAHFIKTKTCR TC Subject 6355 MGNLENCIDNYAIEVSYAYRLGELSTGVMTEEEVEAHYNCVRFLVRNKHKMRCSISSLFEVIV*ALSVWRGVSIMNNLVKALSAFEFVGVFCVLKFPVVVHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKINILDEYLSVSDISGFDVLFSDPYQNISIPREAHFIKTKTCRFGANTC 6954
Range 2: 6355 to 6954 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
422.6 bits(916) | 0.0 | 169/200(84%) | 0/200(0%) | Plus/Minus |
Query 3 AGLVLTPASFGLYEVCLPWNADVLVRV*EQHIKTMNV*DRQVLIKYIYLPLHCTPWRVGLDVPSC*IWTVWYTGCKSHERLVFRNELPY*ATFTATWNTMNNNWKFKHAEHTNKFEC*QSLD*VIHNTHITPNT*GLNNNLKQTRN*APHFVLIPNQETHAVIMRFNFLLSHHAYR*FSKSIGIRHLNCIIINAIFQIAH 602 AG+ PA FGLYEVCLPWNADVLV V*EQHIKT N+ DRQVLIKYIYLPLHCTPWRVGLDVPSC*IWTVW+T CKSH+R V R+ELPY*ATFT TWNTMNNNWKFKH EHTNKF+C QSLD*VIHNTH TPNT*GL+NN KQTRN*APHF+LI NQETH VIMRFNFLL HH R FSKS+ IRHLNCIIINAIFQIAH Subject 6355 AGVSTKPAGFGLYEVCLPWNADVLVGV*EQHIKTRNIRDRQVLIKYIYLPLHCTPWRVGLDVPSC*IWTVWHTRCKSHKRFVLRDELPY*ATFTTTWNTMNNNWKFKHTEHTNKFKCRQSLD*VIHNTHTTPNT*GLDNNFKQTRN*APHFMLISNQETHTVIMRFNFLLGHHTSRQFSKSVSIRHLNCIIINAIFQIAH 6954
Range 3: 6356 to 6955 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
387.8 bits(840) | 0.0 | 166/200(83%) | 0/200(0%) | Plus/Minus |
Query 2 CRFGANTCKFWSL*SVPPLER*CSGKGLRTAHQNHECLRQTSTHQVYLSSLALHTLESRA*CTFLLDLDCLVHRL*KPRKTRLQK*APLLGYFYRYLEHYEQQLEI*ARRTHQQIRMLTKP*LSYS*YSHHAKHLRPKQ*PQTNQKLSTSFCAYSEPGNARSYNALQLPPQSSRL*IILQVYRHKTPQLHNYQCNFPNCP 601 CR TC+FWSL*SVPPLE *C G+GLRTAHQN + RQTSTHQVYLSSLALHTLESRA*CTFLLDLDCL H L*KP+K R Q+*APLLGYFY YLEHYEQQLEI*A RTHQQI+M TKP*LSYS*YSHHAKHLRP+Q* QTN KLSTSF AY EPGNA SYNALQLPP+SS * ILQV +HKTPQLHNYQCNFPNCP Subject 6356 CRC*HQTCRFWSL*SVPPLEC*CFGRGLRTAHQNQKYQRQTSTHQVYLSSLALHTLESRA*CTFLLDLDCLAHPL*KPQKIRPQR*APLLGYFYHYLEHYEQQLEI*AHRTHQQIQMQTKP*LSYS*YSHHAKHLRPRQ*LQTN*KLSTSFYAYFEPGNAHSYNALQLPPRSSHQ*TILQVCKHKTPQLHNYQCNFPNCP 6955
Range 4: 6356 to 6955 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
364.9 bits(790) | 0.0 | 168/200(84%) | 0/200(0%) | Minus/Plus |
Query 2 WAIWKIALIIMQLRCLMPIDLENYL*A**LRRKLKRIITACVSWFGISTK*GAQFLVCLRLLFRP*VFGVM*VL*IT*SRLCQHSNLLVCSACLNFQLLFIVFQVAVKVA**GSSFLKTSLSWLLQPVYQTVQI*QEGTSSPTLQGVQCKGR*IYLMSTCLSQTFMVLMCCSQTLTRTSAFQGRHTS*RPKLAGVSTKPA 601 WAIWKIALIIMQLRCLM DLEN L ** RRKLKRIIT CVSWF IS K*GAQFLVCL+LL RP*VFGV+*VL*IT*SRLC H NLLVCS CLNFQLLFIVFQV VKVA**GSS L+T+L WLLQ V QTVQI*QEGTSSPTLQGVQCKGR*IYLMSTCLS F+VLMCCSQT T+TSAFQGRHTS*RPK AG+ PA Subject 6356 WAIWKIALIIMQLRCLMLTDLENCLLV**PRRKLKRIITVCVSWFEISIK*GAQFLVCLKLLSRP*VFGVV*VL*IT*SRLCLHLNLLVCSVCLNFQLLFIVFQVVVKVA**GSSSLRTNLLWLLQRVCQTVQI*QEGTSSPTLQGVQCKGR*IYLMSTCLSLIFLVLMCCSQTPTKTSAFQGRHTS*RPKPAGLVLTPA 6955
Range 5: 6354 to 6956 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
353.4 bits(765) | 0.0 | 171/201(85%) | 0/201(0%) | Minus/Plus |
Query 1 NGQFGKLH**LCN*GVLCL*TWRIIYRRDD*GGS*SAL*LRAFPGSE*AQNEVLNFWFV*GYCLGLKCLA*CEYYE*LSQGFVSIRICWCVLRA*IXXXXXXXSR*R*K*PNKGAHF*RRVFRGFYSRCTRQSKSNRKVHQALLSRVCSAREDKYT**VLVCLRHSWF*CAVLRPLPEHQRSKGGTLHKDQNLQVLAPNLQ 603 NGQFGKLH**LCN*GVLCL TWRI+Y DD GGS*SAL*L AFPGS+*A NEVLNF FV* YCLGLKCLA CEYYE*LSQGFV I ICWCVL A*ISSCCS*CSR* *K*PNKGAH * R+F GFYS C RQSKSNRKVHQALLSRVCSAREDKYT**VLVCL + WF*CAVLRPLP+HQ SKGGTLHKDQNLQV +LQ Subject 6354 NGQFGKLH**LCN*GVLCLQTWRIVYWCDDRGGS*SAL*LCAFPGSK*A*NEVLNF*FV*SYCLGLKCLAWCEYYE*LSQGFVCI*ICWCVLCA*ISSCCS*CSR*W*K*PNKGAHL*GRIFCGFYSGCARQSKSNRKVHQALLSRVCSAREDKYT**VLVCL*YFWF*CAVLRPLPKHQHSKGGTLHKDQNLQVWC*HLQ 6956
Range 6: 6684 to 6956 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
192.1 bits(413) | 0.0 | 84/91(92%) | 0/91(0%) | Plus/Minus |
Query 1 LQVWC*HLQVLVFMKCASLGTLMFW*GSENSTSKP*MSETDKYSSSIFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR 273 LQV +LQVLVFMKCASLG LMFW*GSENSTSKP +SETDKYSSSIFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR Subject 6684 LQVLAPNLQVLVFMKCASLGMLMFW*GSENSTSKPEISETDKYSSSIFIFPCTAHPGE*GLMYLPVRFGLSGTPAVKATKDSSSEMSSLIR 6956
Range 7: 6354 to 6614 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
181.1 bits(389) | 0.0 | 84/87(97%) | 0/87(0%) | Plus/Minus |
Query 343 NSNADKALTKLFIILTSRQTLKA*TITSNKPEIEHLILCLFRTRKRTQL*CASTSSSVITPIDNSPSL*A*DTSIA*LSMQFSKLPI 603 NSNADKALTKLFIILT RQTLKA*TITSNK EIEHLILCLFRTRKRTQL*CASTSSSVITP+DNSPSL*A*DTSIA*LSMQFSKLPI Subject 6354 NSNADKALTKLFIILTPRQTLKA*TITSNKLEIEHLILCLFRTRKRTQL*CASTSSSVITPVDNSPSL*A*DTSIA*LSMQFSKLPI 6614
Nucleotide Sequence (303 letters)
Query ID: | ds2016-133_14 |
Query definition: | No definition line |
Query length: | 603 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
243.5 | 1281.7 | 27% | 6.225e-63 | 97% | AY368590.1 | |
243.5 | 1169.5 | 26% | 6.225e-63 | 83% | KX274275.1 | |
219.2 | 681.0 | 32% | 1.273e-55 | 45% | AY881627.1 | |
217.8 | 668.2 | 32% | 3.3e-55 | 45% | KX274277.1 | |
216.9 | 631.2 | 32% | 6.228e-55 | 40% | AF026278.1 |
Alignments
Rupestris stem pitting associated virus strain Syrah, complete genome
Sequence ID: AY368590.1 Length: 8742 Number of Matches: 7
Range 1: 1192 to 1491 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
243.5 bits(525) | 0.0 | 100/100(100%) | 0/100(0%) | Minus/Plus |
Query 3 GSLLMPNIPKLVISFFCRMMPNALARLSSNFRESSLDSFVYALEPFNFSISLIDITPDFFEHLFLFSCLNELIEDNVEEVMDNSWFGLSNAQFDRQRCPF 302 GSLLMPNIPKLVISFFCRMMPNALARLSSNFRESSLDSFVYALEPFNFSISLIDITPDFFEHLFLFSCLNELIEDNVEEVMDNSWFGLSNAQFDRQRCPF Subject 1192 GSLLMPNIPKLVISFFCRMMPNALARLSSNFRESSLDSFVYALEPFNFSISLIDITPDFFEHLFLFSCLNELIEDNVEEVMDNSWFGLSNAQFDRQRCPF 1491
Range 2: 1192 to 1491 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
228.8 bits(493) | 0.0 | 97/100(97%) | 0/100(0%) | Plus/Minus |
Query 3 EGTPLTIKLCIA*PKPRVVHNFLNIILDQFIETREQEKVLKEVRSNVYEAY*EVERFKCIHK*VQRGLTKI**KPSQSIWHHSTKERDDQLWNIWH*QGA 302 EGTPLTIKLCIA*PKP VVHNFLNIILDQFIETREQEKVLKEVRSN+YEAY*EVERFKCIHK*VQRGLTKI**KPSQSIWHHSTKERDD LWNIWH*QGA Subject 1192 EGTPLTIKLCIA*PKP*VVHNFLNIILDQFIETREQEKVLKEVRSNIYEAY*EVERFKCIHK*VQRGLTKI**KPSQSIWHHSTKERDD*LWNIWH*QGA 1491
Range 3: 1193 to 1492 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
221.0 bits(476) | 0.0 | 97/100(97%) | 0/100(0%) | Plus/Minus |
Query 2 RRDTFDDQTVHCLAQTTSCP*LPQHYPRSIH*DKRTGKGAQRSQE*CL*GLLRS*KVQVHTQMSPKRTHENLMKA*PEHLASFYKRKR*PALEYLALAGS 301 RRDTFDDQTVHCLAQT SCP*LPQHYPRSIH*DKRTGKGAQRSQE* L*GLLRS*KVQVHTQMSPKRTHENLMKA*PEHLASFYKRKR* ALEYLALAGS Subject 1193 RRDTFDDQTVHCLAQTMSCP*LPQHYPRSIH*DKRTGKGAQRSQE*YL*GLLRS*KVQVHTQMSPKRTHENLMKA*PEHLASFYKRKR*LALEYLALAGS 1492
Range 4: 1194 to 1493 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
218.3 bits(470) | 0.0 | 97/100(97%) | 0/100(0%) | Minus/Plus |
Query 1 LPANAKYSKAGHLFLL*NDAKCSG*AFIKFS*VLFGLICVCT*TFQLLNKPHRHYS*LL*APFPVLLSQ*IDRG*C*GSYGQLVVWAKQCTV*SSKVSLL 300 LPANAKYSKA HLFLL*NDAKCSG*AFIKFS*VLFGLICVCT*TFQLLNKPHR+YS*LL*APFPVLLSQ*IDRG*C*GSYGQL+VWAKQCTV*SSKVSLL Subject 1194 LPANAKYSKASHLFLL*NDAKCSG*AFIKFS*VLFGLICVCT*TFQLLNKPHRYYS*LL*APFPVLLSQ*IDRG*C*GSYGQLMVWAKQCTV*SSKVSLL 1493
Range 5: 1191 to 1493 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
195.3 bits(420) | 0.0 | 100/101(99%) | 0/101(0%) | Plus/Minus |
Query 1 EKGHL*RSNCALLSPNHEXXXXXXXXXXXXXXRQENRKRCSKKSGVMSMRLIEKLKGSSAYTNESKEDSRKFDESLARAFGIILQKKEMTSFGIFGISREP 303 EKGHL*RSNCALLSPNHELSITSSTLSSINSLRQENRKRCSKKSGV+SMRLIEKLKGSSAYTNESKEDSRKFDESLARAFGIILQKKEMTSFGIFGISREP Subject 1191 EKGHL*RSNCALLSPNHELSITSSTLSSINSLRQENRKRCSKKSGVISMRLIEKLKGSSAYTNESKEDSRKFDESLARAFGIILQKKEMTSFGIFGISREP 1493
Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome
Sequence ID: KX274275.1 Length: 8724 Number of Matches: 7
Range 1: 1192 to 1491 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
243.5 bits(525) | 0.0 | 100/100(100%) | 0/100(0%) | Minus/Plus |
Query 3 GSLLMPNIPKLVISFFCRMMPNALARLSSNFRESSLDSFVYALEPFNFSISLIDITPDFFEHLFLFSCLNELIEDNVEEVMDNSWFGLSNAQFDRQRCPF 302 GSLLMPNIPKLVISFFCRMMPNALARLSSNFRESSLDSFVYALEPFNFSISLIDITPDFFEHLFLFSCLNELIEDNVEEVMDNSWFGLSNAQFDRQRCPF Subject 1192 GSLLMPNIPKLVISFFCRMMPNALARLSSNFRESSLDSFVYALEPFNFSISLIDITPDFFEHLFLFSCLNELIEDNVEEVMDNSWFGLSNAQFDRQRCPF 1491
Range 2: 1192 to 1491 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
203.1 bits(437) | 0.0 | 84/100(84%) | 0/100(0%) | Plus/Minus |
Query 3 EGTPLTIKLCIA*PKPRVVHNFLNIILDQFIETREQEKVLKEVRSNVYEAY*EVERFKCIHK*VQRGLTKI**KPSQSIWHHSTKERDDQLWNIWH*QGA 302 EGTPLTIKLCIA PKPRVVH+ LNI+L QFI+TREQEKVLKEVRS++Y+AY*++ERFKCIHK*VQRGLTKI**KPSQSIWHHSTKE D+ LWN+WH*Q A Subject 1192 EGTPLTIKLCIAQPKPRVVHDLLNIVLYQFIKTREQEKVLKEVRSDIYKAY*KIERFKCIHK*VQRGLTKI**KPSQSIWHHSTKEGDN*LWNVWH*QRA 1491
Range 3: 1193 to 1492 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
195.3 bits(420) | 0.0 | 87/100(87%) | 0/100(0%) | Plus/Minus |
Query 2 RRDTFDDQTVHCLAQTTSCP*LPQHYPRSIH*DKRTGKGAQRSQE*CL*GLLRS*KVQVHTQMSPKRTHENLMKA*PEHLASFYKRKR*PALEYLALAGS 301 RRDTFDDQ VHC AQTTSCP* PQH P S+H*DKRTGKGAQRSQE* L*GLL++*KVQVHTQMSPKRTHENLMKA*PEHLASFYKR+R* ALE LALA S Subject 1193 RRDTFDDQIVHCSAQTTSCP*PPQHCPLSVH*DKRTGKGAQRSQE*YL*GLLKN*KVQVHTQMSPKRTHENLMKA*PEHLASFYKRRR*LALECLALAES 1492
Range 4: 1191 to 1493 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
190.3 bits(409) | 0.0 | 95/101(94%) | 0/101(0%) | Plus/Minus |
Query 1 EKGHL*RSNCALLSPNHEXXXXXXXXXXXXXXRQENRKRCSKKSGVMSMRLIEKLKGSSAYTNESKEDSRKFDESLARAFGIILQKKEMTSFGIFGISREP 303 EKGHL*RSNCALLSPNHELS+TSSTLSSI+SLRQENRKRCSKKSGV+S+RLIEKLKGSSAYTNESKEDSRKFDESLARAFGIILQKKE+TSFG+FGISREP Subject 1191 EKGHL*RSNCALLSPNHELSMTSSTLSSISSLRQENRKRCSKKSGVISIRLIEKLKGSSAYTNESKEDSRKFDESLARAFGIILQKKEITSFGMFGISREP 1493
Range 5: 1194 to 1493 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
184.4 bits(396) | 0.0 | 83/100(83%) | 0/100(0%) | Minus/Plus |
Query 1 LPANAKYSKAGHLFLL*NDAKCSG*AFIKFS*VLFGLICVCT*TFQLLNKPHRHYS*LL*APFPVLLSQ*IDRG*C*GSYGQLVVWAKQCTV*SSKVSLL 300 L ANAK+SKA +L LL*NDAKCSG*AFIKFS*VLFGLICVCT*TFQ NKP+R++S*LL*APFPVLLS * DRG C*G +GQLVVWA+QCT+*SSKVSLL Subject 1194 LSANAKHSKASYLLLL*NDAKCSG*AFIKFS*VLFGLICVCT*TFQFFNKPYRYHS*LL*APFPVLLS**TDRGQC*GGHGQLVVWAEQCTI*SSKVSLL 1493
Rupestris stem pitting associated virus strain BS, complete genome
Sequence ID: AY881627.1 Length: 8743 Number of Matches: 7
Range 1: 1192 to 1491 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
219.2 bits(472) | 0.0 | 88/100(88%) | 0/100(0%) | Minus/Plus |
Query 3 GSLLMPNIPKLVISFFCRMMPNALARLSSNFRESSLDSFVYALEPFNFSISLIDITPDFFEHLFLFSCLNELIEDNVEEVMDNSWFGLSNAQFDRQRCPF 302 GSLLMPNI KLVISFFCRMMPNALARLSSNFRE SLDSFVY+LEPFNFS++L+DITPDFFEHLFLFSCLNELIE+NVEEVMDNSWFGL + QF+RQR PF Subject 1192 GSLLMPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDITPDFFEHLFLFSCLNELIEENVEEVMDNSWFGLGDLQFNRQRAPF 1491
Range 2: 1191 to 1493 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
125.2 bits(267) | 0.0 | 69/101(68%) | 0/101(0%) | Plus/Minus |
Query 1 EKGHL*RSNCALLSPNHEXXXXXXXXXXXXXXRQENRKRCSKKSGVMSMRLIEKLKGSSAYTNESKEDSRKFDESLARAFGIILQKKEMTSFGIFGISREP 303 + G L*R NC SPN ELSITSST SSI+SLRQE R +CSKKSGV+S +L EKLKGS YTNES E SRKF+ESLA A GII QKK++T+ IFG+S+EP Subject 1191 KNGAL*RLNCKSPSPNQELSITSSTFSSISSLRQEKRNKCSKKSGVISTKLTEKLKGSREYTNESSEHSRKFEESLASALGIIRQKKDITNLEIFGMSKEP 1493
Range 3: 1192 to 1479 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
103.2 bits(219) | 0.0 | 51/96(53%) | 0/96(0%) | Plus/Minus |
Query 15 LTIKLCIA*PKPRVVHNFLNIILDQFIETREQEKVLKEVRSNVYEAY*EVERFKCIHK*VQRGLTKI**KPSQSIWHHSTKERDDQLWNIWH*QGA 302 LTI+L I PKPR+VHN NI+LD FIE R+++ +LKE+RS+++ *EV+ K IHK*+Q L++I* +PS+ I HHS +ER Q NI H Q A Subject 1192 LTIELQIPEPKPRIVHNLFNILLD*FIEARKEK*MLKEIRSDIH*VD*EVKGLKGIHK*IQ*TLSEI*REPSKCIRHHSAEERYYQFRNIRHEQRA 1479
Range 4: 1200 to 1493 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.0 bits(166) | 0.0 | 44/98(45%) | 0/98(0%) | Minus/Plus |
Query 1 ANAKYSKAGHLFLL*NDAKCSG*AFIKFS*VLFGLICVCT*TFQLLNKPHRHYS*LL*APFPVLLSQ*IDRG*C*GSYGQLVVWAKQCTV*SSKVSLL 294 A+A+Y G++FLL NDA C+ *A KF V G ICV * LL++ ++S* L*A + L Q* +RG C* YGQ +VWA+ + SS+ +L Subject 1200 AHAEYF*IGNIFLLPNDA*CTC*ALFKFPRVFTGFICVFP*AL*LLSQLSGYHS*FL*AFISLFLPQ*TNRGEC*RGYGQFLVWARGFAIQSSESPVL 1493
Range 5: 1193 to 1477 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
76.7 bits(161) | 0.0 | 46/95(48%) | 0/95(0%) | Plus/Minus |
Query 17 DDQTVHCLAQTTSCP*LPQHYPRSIH*DKRTGKGAQRSQE*CL*GLLRS*KVQVHTQMSPKRTHENLMKA*PEHLASFYKRKR*PALEYLALAGS 301 DD + AQT +CP* QH PR +H* K+ AQR+QE* LRS*+ Q +TQM+P T NL +A* H ASF +RK P +Y A A S Subject 1193 DD*IANPRAQTKNCP*PLQHSPRLVH*GKKREINAQRNQE*YPLS*LRS*RAQGNTQMNPVNTLGNLKRA*QVH*ASFGRRKILPI*KYSA*AKS 1477
Grapevine rupestris stem pitting associated virus isolate SK30, complete genome
Sequence ID: KX274277.1 Length: 8724 Number of Matches: 7
Range 1: 1192 to 1491 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
217.8 bits(469) | 0.0 | 87/100(87%) | 0/100(0%) | Minus/Plus |
Query 3 GSLLMPNIPKLVISFFCRMMPNALARLSSNFRESSLDSFVYALEPFNFSISLIDITPDFFEHLFLFSCLNELIEDNVEEVMDNSWFGLSNAQFDRQRCPF 302 GSLL+PNI KLVISFFCRMMPNALARLSSNFRE SLDSFVY+LEPFNFS++L+DITPDFFEHLFLFSCLNELIE+NVEEVMDNSWFGL + QF+RQR PF Subject 1192 GSLLLPNISKLVISFFCRMMPNALARLSSNFRECSLDSFVYSLEPFNFSVNLVDITPDFFEHLFLFSCLNELIEENVEEVMDNSWFGLGDLQFNRQRAPF 1491
Range 2: 1191 to 1493 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.4 bits(263) | 0.0 | 69/101(68%) | 0/101(0%) | Plus/Minus |
Query 1 EKGHL*RSNCALLSPNHEXXXXXXXXXXXXXXRQENRKRCSKKSGVMSMRLIEKLKGSSAYTNESKEDSRKFDESLARAFGIILQKKEMTSFGIFGISREP 303 + G L*R NC SPN ELSITSST SSI+SLRQE R +CSKKSGV+S +L EKLKGS YTNES E SRKF+ESLA A GII QKK++T+ IFG S+EP Subject 1191 KNGAL*RLNCKSPSPNQELSITSSTFSSISSLRQEKRNKCSKKSGVISTKLTEKLKGSREYTNESSEHSRKFEESLASALGIIRQKKDITNLEIFGKSKEP 1493
Range 3: 1210 to 1479 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
98.2 bits(208) | 0.0 | 47/90(52%) | 0/90(0%) | Plus/Minus |
Query 15 LTIKLCIA*PKPRVVHNFLNIILDQFIETREQEKVLKEVRSNVYEAY*EVERFKCIHK*VQRGLTKI**KPSQSIWHHSTKERDDQLWNI 284 LTI+L I PKPR+VHN NI+LD FIE R+++ +LKE+RS+++ *EV+ K IHK*+Q L++I* +PS+ I HHS +ER Q +I Subject 1210 LTIELQIPEPKPRIVHNLFNILLD*FIEARKEK*MLKEIRSDIH*VD*EVKGLKGIHK*IQ*TLSEI*GEPSKCIRHHSAEERYHQFRDI 1479
Range 4: 1200 to 1493 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
77.1 bits(162) | 0.0 | 44/98(45%) | 0/98(0%) | Minus/Plus |
Query 1 ANAKYSKAGHLFLL*NDAKCSG*AFIKFS*VLFGLICVCT*TFQLLNKPHRHYS*LL*APFPVLLSQ*IDRG*C*GSYGQLVVWAKQCTV*SSKVSLL 294 A A+Y G +FLL NDA C+ *A +KF V G ICV * LL++ ++S* L*A + L Q* +RG C* YGQ +VWA+ + SS+ +L Subject 1200 ALAEYL*IGDIFLLPNDA*CTC*ALLKFPRVFTGFICVFP*AL*LLSQLSGYHS*FL*AFISLFLPQ*TNRGEC*RGYGQFLVWARGFAIQSSESPVL 1493
Range 5: 1193 to 1477 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
77.1 bits(162) | 0.0 | 46/95(48%) | 0/95(0%) | Plus/Minus |
Query 17 DDQTVHCLAQTTSCP*LPQHYPRSIH*DKRTGKGAQRSQE*CL*GLLRS*KVQVHTQMSPKRTHENLMKA*PEHLASFYKRKR*PALEYLALAGS 301 DD + AQT +CP* QH PR +H* K+ AQR+QE* LRS*+ Q +TQM+P T NL +A* H ASF +RK P Y A A S Subject 1193 DD*IANPRAQTKNCP*PLQHSPRLVH*GKKREINAQRNQE*YPLS*LRS*RAQGNTQMNPVNTLGNLRRA*QVH*ASFGRRKISPI*RYSARAKS 1477
Grapevine Rupestris stem pitting associated virus, complete genome
Sequence ID: AF026278.1 Length: 8725 Number of Matches: 8
Range 1: 1192 to 1491 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
216.9 bits(467) | 0.0 | 87/100(87%) | 0/100(0%) | Minus/Plus |
Query 3 GSLLMPNIPKLVISFFCRMMPNALARLSSNFRESSLDSFVYALEPFNFSISLIDITPDFFEHLFLFSCLNELIEDNVEEVMDNSWFGLSNAQFDRQRCPF 302 GSLLMPNI KLVISFFCRMMPNALARLSS+FRE SLDSFVY+LEPFNFS++L+DITPDFFEHLFLFSCLNELIE+NVEEVMDNSWFGL + QF+RQR PF Subject 1192 GSLLMPNISKLVISFFCRMMPNALARLSSSFRECSLDSFVYSLEPFNFSVNLVDITPDFFEHLFLFSCLNELIEENVEEVMDNSWFGLGDLQFNRQRAPF 1491
Range 2: 1191 to 1493 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
122.0 bits(260) | 0.0 | 67/101(66%) | 0/101(0%) | Plus/Minus |
Query 1 EKGHL*RSNCALLSPNHEXXXXXXXXXXXXXXRQENRKRCSKKSGVMSMRLIEKLKGSSAYTNESKEDSRKFDESLARAFGIILQKKEMTSFGIFGISREP 303 + G L R NC SPN ELS+TSST SSINS RQE R +CSKKSGV+S +L EKLKGSS YTNES E SRK +ESLA AFGII QK +MT+ + GIS+EP Subject 1191 KNGALWRLNCKSPSPNQELSMTSSTFSSINSFRQEKRNKCSKKSGVISTKLTEKLKGSSEYTNESSEHSRKLEESLASAFGIIRQKNDMTNLEMLGISKEP 1493
Range 3: 1192 to 1491 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
93.2 bits(197) | 0.0 | 44/100(44%) | 0/100(0%) | Plus/Minus |
Query 3 EGTPLTIKLCIA*PKPRVVHNFLNIILDQFIETREQEKVLKEVRSNVYEAY*EVERFKCIHK*VQRGLTKI**KPSQSIWHHSTKERDDQLWNIWH*QGA 302 E PL I+L + KPR+VH+ LN++LDQ I E++ +LKE+RS ++ +++ K +HK*+ R L+K KP + IWHH KE DQL N+ H Q A Subject 1192 ERGPLAIEL*VPKSKPRIVHDLLNVLLDQLI*AGEEK*MLKEIRSYIH*IDGKIKGLK*VHK*I*RTLSKARRKPGECIWHHPAKE*YDQLRNVGHKQRA 1491
Range 4: 1200 to 1493 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
63.4 bits(132) | 0.0 | 39/98(40%) | 0/98(0%) | Minus/Plus |
Query 1 ANAKYSKAGHLFLL*NDAKCSG*AFIKFS*VLFGLICVCT*TFQLLNKPHRHYS*LL*APFPVLLSQ*IDRG*C*GSYGQLVVWAKQCTV*SSKVSLL 294 A A++ GH+ LL +DAKC+ AF S V ICV T* + + S* L*A +LL +*+DRG *G +GQ +VW T+ S + +L Subject 1200 AYAQHF*VGHIILLPDDAKCTRQAFF*LSRVFARFICVLT*AL*FFRQFSGYNS*FL*AFISLLLPK*VDRGER*GGHGQFLVWTWGLTIQSPEGPVL 1493
Range 5: 1358 to 1450 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
38.6 bits(78) | 0.0 | 17/31(55%) | 0/31(0%) | Plus/Minus |
Query 44 QTTSCP*LPQHYPRSIH*DKRTGKGAQRSQE 136 QT +CP* PQ PRS H +R AQR+QE Subject 1358 QTKNCP*PPQRSPRSTHLGRRREINAQRNQE 1450
Range 6: 1223 to 1336 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
29.9 bits(59) | 0.0 | 18/38(47%) | 0/38(0%) | Plus/Minus |
Query 158 RS*KVQVHTQMSPKRTHENLMKA*PEHLASFYKRKR*P 271 ++*+ QV TQM+ T E+ KA HLAS KR *P Subject 1223 KN*RAQVSTQMNLANTLES*KKAWRVHLASSGKRMI*P 1336
Nucleotide Sequence (388 letters)
Query ID: | ds2016-133_14 |
Query definition: | No definition line |
Query length: | 603 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
278.7 | 1516.5 | 23% | 2.373e-73 | 82% | KX274277.1 | |
276.9 | 1265.9 | 25% | 8.454e-73 | 73% | AF057136.1 | |
276.9 | 1283.3 | 25% | 8.454e-73 | 73% | AF026278.1 | |
276.9 | 1265.9 | 25% | 8.454e-73 | 73% | NC_001948.1 | |
276.9 | 1279.2 | 25% | 8.454e-73 | 68% | KT000368.1 |
Alignments
Grapevine rupestris stem pitting associated virus isolate SK30, complete genome
Sequence ID: KX274277.1 Length: 8724 Number of Matches: 8
Range 1: 4024 to 4383 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
278.7 bits(602) | 0.0 | 117/120(98%) | 0/120(0%) | Plus/Plus |
Query 27 ILGVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKSDLEMDDGCKVAKAGRSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQ 386 + GVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKSDLEMDDGCKVAKAGRSKKEGW+VVTFEVFLRKVAGLKAGHCVIFDEVQ Subject 4024 LTGVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKSDLEMDDGCKVAKAGRSKKEGWNVVTFEVFLRKVAGLKAGHCVIFDEVQ 4383
Range 2: 4020 to 4385 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
275.5 bits(595) | 0.0 | 112/122(92%) | 0/122(0%) | Plus/Plus |
Query 23 GYTWCDK**KV**CKTLAFWNINYRY*AKRANGCTWHIWGWEEFFVQKFHEEV*G*ICNFCFSKTSFSEFNQK*S*DG*WLQSCQGRQVKEGRVGCSNF*GLP*KSCWSEGWSLCDF**GPA 388 G WCDK *KV *CKTLAFW+INYRY*AKRANGCTWHIWGWEEFFVQ+FHEEV*G*ICNFCFSKTSFSEFN K*S*DG*WLQSCQGR VKEGRV CSNF*GLP*K CWSEGWSLCDF**GPA Subject 4020 GPNWCDKR*KVQ*CKTLAFWHINYRY*AKRANGCTWHIWGWEEFFVQEFHEEV*G*ICNFCFSKTSFSEFN*K*S*DG*WLQSCQGR*VKEGRVECSNF*GLP*KGCWSEGWSLCDF**GPA 4385
Range 3: 4030 to 4383 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
268.7 bits(580) | 0.0 | 111/118(94%) | 0/118(0%) | Minus/Minus |
Query 33 LDLIKNHTVTSLQTSNFSKEDLKSYYIPPFLL*PACLGNFAAIIHLKITFD*IR*SSSWRNKSYKFTLRPLHETFVQKTLPSPKCAKYNR*LSWLNICS*YSRKPRFCITKLFITYHT 386 LDLIKNHTVTSLQTSN SKEDLKSYYIPPFLL*P CLGNFAAIIHLKITF+*IR*SSSWRNKSYKFTLRPLHET VQKTLPSPKCAKYNR*LSWLNICS*Y+RKPRFCIT+LFI YHT Subject 4030 LDLIKNHTVTSLQTSNLSKEDLKSYYIPPFLL*PTCLGNFAAIIHLKITFN*IR*SSSWRNKSYKFTLRPLHETLVQKTLPSPKCAKYNR*LSWLNICS*YARKPRFCITELFIAYHT 4383
Range 4: 4029 to 4385 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
267.7 bits(578) | 0.0 | 117/119(98%) | 0/119(0%) | Minus/Minus |
Query 32 SWTSSKITQ*PAFRPATFLRKTSKVTTSHPSFFDLPALATLQPSSISRSLLIEFAKARLGETKVTNLPSDLFMKLLYKKLFPAPNVPSTTVSSLGLISVVDIPESQGFASLNFSSLITP 388 SWTSSKITQ*PAFRPATFLRKTSKVTT HPSFFDLPALATLQPSSISRSLLIEFAKARLGETKVTNLPSDLFMKLLYKKLFPAPNVPSTTVSSLGLISVVD+PESQGFASLNFSSLITP Subject 4029 SWTSSKITQ*PAFRPATFLRKTSKVTTFHPSFFDLPALATLQPSSISRSLLIEFAKARLGETKVTNLPSDLFMKLLYKKLFPAPNVPSTTVSSLGLISVVDMPESQGFASLNFSSLITP 4385
Range 5: 4115 to 4384 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
209.1 bits(450) | 0.0 | 86/90(96%) | 0/90(0%) | Minus/Minus |
Query 118 AGPHQKSHSDQPSDQQLF*GRPQKLLHPTLPSLTCLPWQLCSHHPSQDHF*LNSLKLVLEKQKLQIYPQTSS*NFCTKNSSQPQMCQVQP 387 AGPHQKSHSDQPSDQQ F*GRPQKLLH TLPSLT LPWQLCSHHPSQDHF*LNSLKLVLEKQKLQIYPQTSS*N CTKNSSQPQMCQVQP Subject 4115 AGPHQKSHSDQPSDQQPF*GRPQKLLHSTLPSLTYLPWQLCSHHPSQDHF*LNSLKLVLEKQKLQIYPQTSS*NSCTKNSSQPQMCQVQP 4384
Range 6: 4019 to 4084 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
44.6 bits(91) | 0.0 | 18/22(82%) | 0/22(0%) | Minus/Minus |
Query 22 IFQKAKVLHH*TFHHLSHQVYP 87 I QKAKVLHH*TFH LSHQ+ P Subject 4019 ICQKAKVLHH*TFHRLSHQLGP 4084
Range 7: 4028 to 4189 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
108.7 bits(231) | 0.0 | 50/54(93%) | 0/54(0%) | Plus/Plus |
Query 31 LV**VMKSLVMQNLGFLEYQLQILSQES*RLYLAHLGLGRVFCTKVS*RGLRVN 192 LV** MKS VMQNLGFL YQLQILSQES*RLYLAHLGLGRVFCT+VS*RGLRVN Subject 4028 LV**AMKSSVMQNLGFLAYQLQILSQES*RLYLAHLGLGRVFCTRVS*RGLRVN 4189
Rupestris stem pitting associated virus 1, complete genome
Sequence ID: AF057136.1 Length: 8744 Number of Matches: 8
Range 1: 4025 to 4384 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
276.9 bits(598) | 0.0 | 116/120(97%) | 0/120(0%) | Plus/Plus |
Query 27 ILGVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKSDLEMDDGCKVAKAGRSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQ 386 + GVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK+DLEMDD CKVAKAGRSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQ Subject 4025 LTGVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDSCKVAKAGRSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQ 4384
Range 2: 4030 to 4386 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
258.1 bits(557) | 0.0 | 113/119(95%) | 0/119(0%) | Minus/Minus |
Query 32 SWTSSKITQ*PAFRPATFLRKTSKVTTSHPSFFDLPALATLQPSSISRSLLIEFAKARLGETKVTNLPSDLFMKLLYKKLFPAPNVPSTTVSSLGLISVVDIPESQGFASLNFSSLITP 388 +WTSSKITQ PAF PATFLRKTSKVTTSHPSFFDLPALATLQ SSISRS LIEFAKARLGETKVTNLPSDLFMKLLYKKLFPAPNVPSTTV+SLGLISVVDIPESQGFASLNFSSLITP Subject 4030 NWTSSKITQWPAFNPATFLRKTSKVTTSHPSFFDLPALATLQLSSISRSFLIEFAKARLGETKVTNLPSDLFMKLLYKKLFPAPNVPSTTVNSLGLISVVDIPESQGFASLNFSSLITP 4386
Range 3: 4034 to 4384 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
209.1 bits(450) | 0.0 | 87/117(74%) | 0/117(0%) | Minus/Minus |
Query 36 LDLIKNHTVTSLQTSNFSKEDLKSYYIPPFLL*PACLGNFAAIIHLKITFD*IR*SSSWRNKSYKFTLRPLHETFVQKTLPSPKCAKYNR*LSWLNICS*YSRKPRFCITKLFITYH 386 LDLIKNHTV SLQ+ NFSKE+LKSYYIPPFLL*P C NFAAIIH KI FD*I *S+S RNK Y+FTLRP HET VQ+TLPSPKC K++ WLNI S Y+RKPRFCIT+L ITY+ Subject 4034 LDLIKNHTVASLQSCNFSKENLKSYYIPPFLL*PTCFSNFAAIIHFKIIFD*IC*STSGRNKGYEFTLRPFHETLVQETLPSPKCTKHDSQFPWLNISSRYTRKPRFCITELLITYN 4384
Range 4: 4021 to 4383 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.4 bits(418) | 0.0 | 88/121(73%) | 0/121(0%) | Plus/Plus |
Query 23 GYTWCDK**KV**CKTLAFWNINYRY*AKRANGCTWHIWGWEEFFVQKFHEEV*G*ICNFCFSKTSFSEFNQK*S*DG*WLQSCQGRQVKEGRVGCSNF*GLP*KSCWSEGWSLCDF**GP 385 G W K**+V *CKTLAFW I Y Y*AK + W+IWGWEEF VQ+FHE+V*G*I N CFS+T FS+FNQK*S*+G* LQSC R VKEGRVGCSNF*G P*KSC EGW LCDF**GP Subject 4021 GPNWRYK**EVQ*CKTLAFWYIYY*Y*AKGIDCRAWYIWGWEEFLVQEFHEKV*G*IRNLCFSQTCFSKFNQK*S*NG**LQSC*SR*VKEGRVGCSNF*GFP*KSCRIEGWPLCDF**GP 4383
Range 5: 4119 to 4382 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
157.3 bits(337) | 0.0 | 68/88(77%) | 0/88(0%) | Minus/Minus |
Query 121 GPHQKSHSDQPSDQQLF*GRPQKLLHPTLPSLTCLPWQLCSHHPSQDHF*LNSLKLVLEKQKLQIYPQTSS*NFCTKNSSQPQMCQVQ 384 GPHQKSHS QPS QLF*G+PQKLLHPTLPSLT L QLCS+HP QDHF*LN LK V EKQ+L+IYPQT S*N CT+NSSQPQM Q + Subject 4119 GPHQKSHSGQPSILQLF*GKPQKLLHPTLPSLTYLL*QLCSYHPFQDHF*LNLLKHVWEKQRLRIYPQTFS*NSCTRNSSQPQMYQAR 4382
Range 6: 4020 to 4085 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
39.6 bits(80) | 0.0 | 16/22(73%) | 0/22(0%) | Minus/Minus |
Query 22 IFQKAKVLHH*TFHHLSHQVYP 87 I+QKAKVLHH*T HHL Q+ P Subject 4020 IYQKAKVLHH*TSHHL*RQLGP 4085
Range 7: 4038 to 4190 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
76.7 bits(161) | 0.0 | 37/51(73%) | 0/51(0%) | Plus/Plus |
Query 40 *VMKSLVMQNLGFLEYQLQILSQES*RLYLAHLGLGRVFCTKVS*RGLRVN 192 *VM+S VMQNLGFL Y L ILSQ +* L HLGLGRV CT+VS*+GLRVN Subject 4038 *VMRSSVMQNLGFLVYLLLILSQGN*LSCLVHLGLGRVSCTRVS*KGLRVN 4190
Grapevine Rupestris stem pitting associated virus, complete genome
Sequence ID: AF026278.1 Length: 8725 Number of Matches: 8
Range 1: 4024 to 4383 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
276.9 bits(598) | 0.0 | 116/120(97%) | 0/120(0%) | Plus/Plus |
Query 27 ILGVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKSDLEMDDGCKVAKAGRSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQ 386 + GVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK+DLEMDD CKVAKAGRSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQ Subject 4024 LTGVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDSCKVAKAGRSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQ 4383
Range 2: 4029 to 4385 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
258.1 bits(557) | 0.0 | 113/119(95%) | 0/119(0%) | Minus/Minus |
Query 32 SWTSSKITQ*PAFRPATFLRKTSKVTTSHPSFFDLPALATLQPSSISRSLLIEFAKARLGETKVTNLPSDLFMKLLYKKLFPAPNVPSTTVSSLGLISVVDIPESQGFASLNFSSLITP 388 +WTSSKITQ PAF PATFLRKTSKVTTSHPSFFDLPALATLQ SSISRS LIEFAKARLGETKVTNLPSDLFMKLLYKKLFPAPNVPSTTV+SLGLISVVDIPESQGFASLNFSSLITP Subject 4029 NWTSSKITQWPAFNPATFLRKTSKVTTSHPSFFDLPALATLQLSSISRSFLIEFAKARLGETKVTNLPSDLFMKLLYKKLFPAPNVPSTTVNSLGLISVVDIPESQGFASLNFSSLITP 4385
Range 3: 4033 to 4383 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
208.2 bits(448) | 0.0 | 87/117(74%) | 0/117(0%) | Minus/Minus |
Query 36 LDLIKNHTVTSLQTSNFSKEDLKSYYIPPFLL*PACLGNFAAIIHLKITFD*IR*SSSWRNKSYKFTLRPLHETFVQKTLPSPKCAKYNR*LSWLNICS*YSRKPRFCITKLFITYH 386 LDLIKNHTV SLQ+ NFS+E+LKSYYIPPFLL*P C GNFAAIIH KI FD*I *S+S RNK Y+ TLRP HET VQKTLPSPKC K++ WLNI S Y+RKPRFCIT+L ITY+ Subject 4033 LDLIKNHTVASLQSCNFSEENLKSYYIPPFLL*PTCFGNFAAIIHFKIIFD*IC*STSGRNKGYELTLRPFHETLVQKTLPSPKCTKHDSQFPWLNIRSRYTRKPRFCITELLITYN 4383
Range 4: 4020 to 4382 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
199.5 bits(429) | 0.0 | 88/121(73%) | 0/121(0%) | Plus/Plus |
Query 23 GYTWCDK**KV**CKTLAFWNINYRY*AKRANGCTWHIWGWEEFFVQKFHEEV*G*ICNFCFSKTSFSEFNQK*S*DG*WLQSCQGRQVKEGRVGCSNF*GLP*KSCWSEGWSLCDF**GP 385 G W K**+V *CKTLAFW I Y Y*AK + W+IWGWEEFFVQ+FHE+V*G*+ N CFS+T FS+FNQK*S*+G* LQSCQ R VKEGRVGCSNF*G P KSC EGW LCDF**GP Subject 4020 GPNWRYK**EVQ*CKTLAFWYIYYGY*AKGIDCRAWYIWGWEEFFVQEFHEKV*G*VRNLCFSQTCFSKFNQK*S*NG**LQSCQSR*VKEGRVGCSNF*GFPQKSCRIEGWPLCDF**GP 4382
Range 5: 4118 to 4381 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
163.3 bits(350) | 0.0 | 69/88(78%) | 0/88(0%) | Minus/Minus |
Query 121 GPHQKSHSDQPSDQQLF*GRPQKLLHPTLPSLTCLPWQLCSHHPSQDHF*LNSLKLVLEKQKLQIYPQTSS*NFCTKNSSQPQMCQVQ 384 GPHQKSHS QPS QLF*G+PQKLLHPTLPSLT L WQLCS+HP QDHF*LN LK V EKQ+L+ YPQT S*N CTKNSSQPQM Q + Subject 4118 GPHQKSHSGQPSILQLF*GKPQKLLHPTLPSLTYLLWQLCSYHPFQDHF*LNLLKHVWEKQRLRTYPQTFS*NSCTKNSSQPQMYQAR 4381
Range 6: 4019 to 4084 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
39.6 bits(80) | 0.0 | 16/22(73%) | 0/22(0%) | Minus/Minus |
Query 22 IFQKAKVLHH*TFHHLSHQVYP 87 I+QKAKVLHH*T HHL Q+ P Subject 4019 IYQKAKVLHH*TSHHL*RQLGP 4084
Range 7: 4037 to 4189 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.4 bits(167) | 0.0 | 37/51(73%) | 0/51(0%) | Plus/Plus |
Query 40 *VMKSLVMQNLGFLEYQLQILSQES*RLYLAHLGLGRVFCTKVS*RGLRVN 192 *VM+S VMQNLGFL Y L+ILSQ +* L HLGLGRVFCT+VS*+GLRV+ Subject 4037 *VMRSSVMQNLGFLVYLLRILSQGN*LSCLVHLGLGRVFCTRVS*KGLRVS 4189
Rupestris stem pitting associated virus 1, complete genome
Sequence ID: NC_001948.1 Length: 8744 Number of Matches: 8
Range 1: 4025 to 4384 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
276.9 bits(598) | 0.0 | 116/120(97%) | 0/120(0%) | Plus/Plus |
Query 27 ILGVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKSDLEMDDGCKVAKAGRSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQ 386 + GVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK+DLEMDD CKVAKAGRSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQ Subject 4025 LTGVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDSCKVAKAGRSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQ 4384
Range 2: 4030 to 4386 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
258.1 bits(557) | 0.0 | 113/119(95%) | 0/119(0%) | Minus/Minus |
Query 32 SWTSSKITQ*PAFRPATFLRKTSKVTTSHPSFFDLPALATLQPSSISRSLLIEFAKARLGETKVTNLPSDLFMKLLYKKLFPAPNVPSTTVSSLGLISVVDIPESQGFASLNFSSLITP 388 +WTSSKITQ PAF PATFLRKTSKVTTSHPSFFDLPALATLQ SSISRS LIEFAKARLGETKVTNLPSDLFMKLLYKKLFPAPNVPSTTV+SLGLISVVDIPESQGFASLNFSSLITP Subject 4030 NWTSSKITQWPAFNPATFLRKTSKVTTSHPSFFDLPALATLQLSSISRSFLIEFAKARLGETKVTNLPSDLFMKLLYKKLFPAPNVPSTTVNSLGLISVVDIPESQGFASLNFSSLITP 4386
Range 3: 4034 to 4384 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
209.1 bits(450) | 0.0 | 87/117(74%) | 0/117(0%) | Minus/Minus |
Query 36 LDLIKNHTVTSLQTSNFSKEDLKSYYIPPFLL*PACLGNFAAIIHLKITFD*IR*SSSWRNKSYKFTLRPLHETFVQKTLPSPKCAKYNR*LSWLNICS*YSRKPRFCITKLFITYH 386 LDLIKNHTV SLQ+ NFSKE+LKSYYIPPFLL*P C NFAAIIH KI FD*I *S+S RNK Y+FTLRP HET VQ+TLPSPKC K++ WLNI S Y+RKPRFCIT+L ITY+ Subject 4034 LDLIKNHTVASLQSCNFSKENLKSYYIPPFLL*PTCFSNFAAIIHFKIIFD*IC*STSGRNKGYEFTLRPFHETLVQETLPSPKCTKHDSQFPWLNISSRYTRKPRFCITELLITYN 4384
Range 4: 4021 to 4383 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.4 bits(418) | 0.0 | 88/121(73%) | 0/121(0%) | Plus/Plus |
Query 23 GYTWCDK**KV**CKTLAFWNINYRY*AKRANGCTWHIWGWEEFFVQKFHEEV*G*ICNFCFSKTSFSEFNQK*S*DG*WLQSCQGRQVKEGRVGCSNF*GLP*KSCWSEGWSLCDF**GP 385 G W K**+V *CKTLAFW I Y Y*AK + W+IWGWEEF VQ+FHE+V*G*I N CFS+T FS+FNQK*S*+G* LQSC R VKEGRVGCSNF*G P*KSC EGW LCDF**GP Subject 4021 GPNWRYK**EVQ*CKTLAFWYIYY*Y*AKGIDCRAWYIWGWEEFLVQEFHEKV*G*IRNLCFSQTCFSKFNQK*S*NG**LQSC*SR*VKEGRVGCSNF*GFP*KSCRIEGWPLCDF**GP 4383
Range 5: 4119 to 4382 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
157.3 bits(337) | 0.0 | 68/88(77%) | 0/88(0%) | Minus/Minus |
Query 121 GPHQKSHSDQPSDQQLF*GRPQKLLHPTLPSLTCLPWQLCSHHPSQDHF*LNSLKLVLEKQKLQIYPQTSS*NFCTKNSSQPQMCQVQ 384 GPHQKSHS QPS QLF*G+PQKLLHPTLPSLT L QLCS+HP QDHF*LN LK V EKQ+L+IYPQT S*N CT+NSSQPQM Q + Subject 4119 GPHQKSHSGQPSILQLF*GKPQKLLHPTLPSLTYLL*QLCSYHPFQDHF*LNLLKHVWEKQRLRIYPQTFS*NSCTRNSSQPQMYQAR 4382
Range 6: 4020 to 4085 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
39.6 bits(80) | 0.0 | 16/22(73%) | 0/22(0%) | Minus/Minus |
Query 22 IFQKAKVLHH*TFHHLSHQVYP 87 I+QKAKVLHH*T HHL Q+ P Subject 4020 IYQKAKVLHH*TSHHL*RQLGP 4085
Range 7: 4038 to 4190 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
76.7 bits(161) | 0.0 | 37/51(73%) | 0/51(0%) | Plus/Plus |
Query 40 *VMKSLVMQNLGFLEYQLQILSQES*RLYLAHLGLGRVFCTKVS*RGLRVN 192 *VM+S VMQNLGFL Y L ILSQ +* L HLGLGRV CT+VS*+GLRVN Subject 4038 *VMRSSVMQNLGFLVYLLLILSQGN*LSCLVHLGLGRVSCTRVS*KGLRVN 4190
UNVERIFIED: Grapevine rupestris stem pitting associated virus isolate TI_30 genomic sequence
Sequence ID: KT000368.1 Length: 8568 Number of Matches: 8
Range 1: 3965 to 4324 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
276.9 bits(598) | 0.0 | 116/120(97%) | 0/120(0%) | Plus/Plus |
Query 27 ILGVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKSDLEMDDGCKVAKAGRSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQ 386 + GVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK+DLEMDD CKVAKAGRSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQ Subject 3965 LTGVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDSCKVAKAGRSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQ 4324
Range 2: 3970 to 4326 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
258.1 bits(557) | 0.0 | 113/119(95%) | 0/119(0%) | Minus/Minus |
Query 32 SWTSSKITQ*PAFRPATFLRKTSKVTTSHPSFFDLPALATLQPSSISRSLLIEFAKARLGETKVTNLPSDLFMKLLYKKLFPAPNVPSTTVSSLGLISVVDIPESQGFASLNFSSLITP 388 +WTSSKITQ PAF PATFLRKTSKVTTSHPSFFDLPALATLQ SSISRS LIEFAKARLGETKVTNLPSDLFMKLLYKKLFPAPNVPSTTV+SLGLISVVDIPESQGFASLNFSSLITP Subject 3970 NWTSSKITQWPAFNPATFLRKTSKVTTSHPSFFDLPALATLQLSSISRSFLIEFAKARLGETKVTNLPSDLFMKLLYKKLFPAPNVPSTTVNSLGLISVVDIPESQGFASLNFSSLITP 4326
Range 3: 3974 to 4324 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
209.1 bits(450) | 0.0 | 87/117(74%) | 0/117(0%) | Minus/Minus |
Query 36 LDLIKNHTVTSLQTSNFSKEDLKSYYIPPFLL*PACLGNFAAIIHLKITFD*IR*SSSWRNKSYKFTLRPLHETFVQKTLPSPKCAKYNR*LSWLNICS*YSRKPRFCITKLFITYH 386 LDLIKNHTV SLQ+ NFS+E+LKSYYIPPFLL*P C GNFAAIIH KI F+*I *S+S RNK Y+FTLRP HET VQ+TLPSPKC K+N WLNI S Y+RKPRFCIT+L ITY+ Subject 3974 LDLIKNHTVASLQSCNFSEENLKSYYIPPFLL*PTCFGNFAAIIHFKIIFN*IC*STSGRNKGYEFTLRPFHETLVQETLPSPKCTKHNSQFPWLNIRSRYTRKPRFCITELLITYN 4324
Range 4: 3979 to 4323 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.9 bits(419) | 0.0 | 86/115(75%) | 0/115(0%) | Plus/Plus |
Query 41 K**KV**CKTLAFWNINYRY*AKRANGCTWHIWGWEEFFVQKFHEEV*G*ICNFCFSKTSFSEFNQK*S*DG*WLQSCQGRQVKEGRVGCSNF*GLP*KSCWSEGWSLCDF**GP 385 K**+V *CKTLAFW I Y Y*AK + C W+IWGWEEF VQ+FHE+V*G*I N CFS+T FS+FN K*S*+G* LQSCQ R VKEGRVGCSNF*G P KSC EGW LCDF**GP Subject 3979 K**EVQ*CKTLAFWYIYYGY*AKGIDCCAWYIWGWEEFLVQEFHEKV*G*IRNLCFSQTCFSKFN*K*S*NG**LQSCQSR*VKEGRVGCSNF*GFPQKSCRIEGWPLCDF**GP 4323
Range 5: 4059 to 4322 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
166.0 bits(356) | 0.0 | 70/88(80%) | 0/88(0%) | Minus/Minus |
Query 121 GPHQKSHSDQPSDQQLF*GRPQKLLHPTLPSLTCLPWQLCSHHPSQDHF*LNSLKLVLEKQKLQIYPQTSS*NFCTKNSSQPQMCQVQ 384 GPHQKSHS QPS QLF*G+PQKLLHPTLPSLT L WQLCS+HP QDHF*LN LK V EKQ+L+IYPQT S*N CT+NSSQPQM Q Q Subject 4059 GPHQKSHSGQPSILQLF*GKPQKLLHPTLPSLTYLLWQLCSYHPFQDHF*LNLLKHVWEKQRLRIYPQTFS*NSCTRNSSQPQMYQAQ 4322
Range 6: 3960 to 4025 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
37.7 bits(76) | 0.0 | 15/22(68%) | 0/22(0%) | Minus/Minus |
Query 22 IFQKAKVLHH*TFHHLSHQVYP 87 I+QKAKVLHH*T HHL ++ P Subject 3960 IYQKAKVLHH*TSHHL*RRLGP 4025
Range 7: 3978 to 4130 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
80.8 bits(170) | 0.0 | 38/51(75%) | 0/51(0%) | Plus/Plus |
Query 40 *VMKSLVMQNLGFLEYQLQILSQES*RLYLAHLGLGRVFCTKVS*RGLRVN 192 *VM+S VMQNLGFL Y L+ILSQ +* L L HLGLGRV CT+VS*+GLRVN Subject 3978 *VMRSSVMQNLGFLVYLLRILSQGN*LLCLVHLGLGRVSCTRVS*KGLRVN 4130
Nucleotide Sequence (137 letters)
Query ID: | ds2016-133_14 |
Query definition: | No definition line |
Query length: | 603 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
100.5 | 337.6 | 31% | 1.185e-20 | 73% | AY368590.1 | |
99.6 | 240.7 | 36% | 2.237e-20 | 67% | AB277783.1 | |
98.7 | 322.1 | 18% | 4.221e-20 | 69% | KX274275.1 | |
98.2 | 201.6 | 41% | 5.799e-20 | 58% | AB277784.1 | |
98.2 | 153.4 | 33% | 5.799e-20 | 51% | AB277786.1 |
Alignments
Rupestris stem pitting associated virus strain Syrah, complete genome
Sequence ID: AY368590.1 Length: 8742 Number of Matches: 5
Range 1: 6607 to 6741 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
100.5 bits(213) | 0.0 | 43/45(96%) | 0/45(0%) | Minus/Plus |
Query 1 FEFVGVYSVLRFPVVVHSVPGSGKSSLIRELISEDESFTAFTAGV 135 FEFVGVYSVLRFPVVVHSVPGSGKSSLIRELI+EDESF AFTAGV Subject 6607 FEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGV 6741
Range 2: 6607 to 6741 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
82.2 bits(176) | 0.0 | 33/45(73%) | 0/45(0%) | Plus/Minus |
Query 1 NSGCEGCETLVLRDELSYQTTFTATRNTMNDNWKSEHTIDTHKLK 135 N+G E ETLV +ELSYQTTFT TRN MN+NWKSEH I+THKLK Subject 6607 NAGRESYETLVFSNELSYQTTFTTTRNAMNNNWKSEHAINTHKLK 6741
Range 3: 6605 to 6736 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
77.6 bits(163) | 0.0 | 35/44(80%) | 0/44(0%) | Plus/Minus |
Query 6 RL*RL*NSRPQR*ALLSNYFYRYQEHYERQLEI*AHYRHPQTQT 137 R *+L*NSR Q *ALLSNYFY YQE YE+QLEI*A Y+HPQTQT Subject 6605 RP*KL*NSRLQ**ALLSNYFYHYQERYEQQLEI*ARYKHPQTQT 6736
Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OB1
Sequence ID: AB277783.1 Length: 2876 Number of Matches: 3
Range 1: 863 to 997 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
99.6 bits(211) | 0.0 | 41/45(91%) | 0/45(0%) | Minus/Plus |
Query 1 FEFVGVYSVLRFPVVVHSVPGSGKSSLIRELISEDESFTAFTAGV 135 FEFVG+YSVLRFPVVVHSVPGSGKSSLIREL++EDESF AFTAGV Subject 863 FEFVGIYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGV 997
Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome
Sequence ID: KX274275.1 Length: 8724 Number of Matches: 5
Range 1: 6607 to 6741 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
98.7 bits(209) | 0.0 | 41/45(91%) | 0/45(0%) | Minus/Plus |
Query 1 FEFVGVYSVLRFPVVVHSVPGSGKSSLIRELISEDESFTAFTAGV 135 FEFVGVYSVLRFPVVVHSVPGSGKSSLIREL++EDE+F AFTAGV Subject 6607 FEFVGVYSVLRFPVVVHSVPGSGKSSLIRELVTEDENFIAFTAGV 6741
Range 2: 6607 to 6741 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
76.8 bits(164) | 0.0 | 31/45(69%) | 0/45(0%) | Plus/Minus |
Query 1 NSGCEGCETLVLRDELSYQTTFTATRNTMNDNWKSEHTIDTHKLK 135 N+G +G E LVL D+ SY TTFT TRN MN+NWKSEH I+THKLK Subject 6607 NAGRKGYEILVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLK 6741
Range 3: 6605 to 6736 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
76.7 bits(161) | 0.0 | 34/44(77%) | 0/44(0%) | Plus/Minus |
Query 6 RL*RL*NSRPQR*ALLSNYFYRYQEHYERQLEI*AHYRHPQTQT 137 R *RL*NSRPQ LL NYFY YQE YE+QLEI*A Y+HPQTQT Subject 6605 RP*RL*NSRPQ*QVLLLNYFYHYQERYEQQLEI*ARYKHPQTQT 6736
Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OE8
Sequence ID: AB277784.1 Length: 2876 Number of Matches: 3
Range 1: 863 to 997 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
98.2 bits(208) | 0.0 | 40/45(89%) | 0/45(0%) | Minus/Plus |
Query 1 FEFVGVYSVLRFPVVVHSVPGSGKSSLIRELISEDESFTAFTAGV 135 FEF+GV+SVL+FPVV+HSVPGSGKSSLIRELISEDESF AFTAGV Subject 863 FEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGV 997
Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: Hiz6
Sequence ID: AB277786.1 Length: 2876 Number of Matches: 2
Nucleotide Sequence (408 letters)
Query ID: | ds2016-133_14 |
Query definition: | No definition line |
Query length: | 603 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
313.1 | 1701.0 | 30% | 1.158e-83 | 89% | AB277787.1 | |
314.9 | 1797.2 | 30% | 3.244e-84 | 95% | DQ364979.1 | |
313.1 | 1757.4 | 30% | 1.158e-83 | 92% | DQ364984.1 | |
313.1 | 1681.8 | 29% | 1.156e-83 | 81% | DQ364992.1 | |
313.1 | 1681.8 | 29% | 1.156e-83 | 81% | DQ364994.1 |
Alignments
Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: Hai1
Sequence ID: AB277787.1 Length: 2876 Number of Matches: 7
Range 1: 2437 to 2829 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
313.1 bits(677) | 0.0 | 131/131(100%) | 0/131(0%) | Plus/Plus |
Query 12 GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE*G**WKQCS 404 GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE*G**WKQCS Subject 2437 GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE*G**WKQCS 2829
Range 2: 2436 to 2828 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
296.2 bits(640) | 0.0 | 129/131(98%) | 0/131(0%) | Minus/Minus |
Query 11 EHCFHYQPYSCVTFAKGLLISAPAVPPLISPRLELRFPSAIVCLSTLTSKEAILATISAFVGALLTPPLGSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSKWMFHTIFA*YMQNLRSVVTSLIIP 403 EHCFHYQP+SCVTFAKGLLISAPAVPPLISPRLELRFPSAIVCLSTLTSKEAILATISAFVGALLTPPLGSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSK MFHTIFA*YMQNLRSVVTSLIIP Subject 2436 EHCFHYQPHSCVTFAKGLLISAPAVPPLISPRLELRFPSAIVCLSTLTSKEAILATISAFVGALLTPPLGSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSK*MFHTIFA*YMQNLRSVVTSLIIP 2828
Range 3: 2437 to 2829 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
295.7 bits(639) | 0.0 | 117/131(89%) | 0/131(0%) | Minus/Minus |
Query 12 GALLPLSALFVRDVCKGVVDKRPSRSTTNFSKIGAPLSFSHSLSEHFDFKRGNISDHLCFCWSSLDTTLRFKRALICDSKEEVKGCKLFILIKSFLGPISWWYSRLQMDVPHNFRVVHAKSAQCGHLSYNS 404 GALLPLS F+R++CKGV++KRPSRSTTNFSKIGAPLSFSHSLSEHFDFKRGNIS+HLC CWSSLDTTLRFKRALICDSKEEVKGCKLFILIKSFLGPISWWYSRLQM+VPH+F VVHAKSAQCG+L YNS Subject 2437 GALLPLSTSFMRNICKGVINKRPSRSTTNFSKIGAPLSFSHSLSEHFDFKRGNISNHLCLCWSSLDTTLRFKRALICDSKEEVKGCKLFILIKSFLGPISWWYSRLQMNVPHDFCVVHAKSAQCGYLPYNS 2829
Range 4: 2432 to 2833 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
279.7 bits(604) | 0.0 | 119/134(89%) | 0/134(0%) | Plus/Plus |
Query 7 ILEL*ER*PHCADFACTTRKLCGTSIWRREYHQLIGPRKDLMRMKSLQPLTSSLESQMRARLNLRVVSRELQQKQRWSLILPLLKSKCSDRLWLKESGAPILEKLVVERLGRLSTTPLQTSRTNKADSGSNAPN 408 +LEL* R*PHCADFACTT+K CGT IWRREYHQLIGPRKDLMRMKSLQPLTSSLESQMRARLNLRVVSRELQQ+QRW LILPLLKSKCSDRLWLKESGAPILEKLVVERLGRL TPLQ R N+ DSGSNAP+ Subject 2432 LLEL*GR*PHCADFACTTQKSCGTFIWRREYHQLIGPRKDLMRMKSLQPLTSSLESQMRARLNLRVVSRELQQRQRWLLILPLLKSKCSDRLWLKESGAPILEKLVVERLGRLLITPLQMLRMNEVDSGSNAPS 2833
Range 5: 2436 to 2828 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
274.2 bits(592) | 0.0 | 118/131(90%) | 0/131(0%) | Plus/Plus |
Query 11 WNYKRGDHTAQILHVLRENCVEHPFGDGNTTS*LGQERI**E*KVCSL*LLPWSHR*ERA*T*GWCQESSNKSRDGR*YCLF*SQSAQTDYG*RKAELQSWRN*WWNGWGAYQQPLCKRHARIRLIVEAML 403 WNYK G+HTAQILHVLR+N VEH FGDGNTTS*LGQERI**E*KVCSL*LLPWSHR*ERA*T*GWCQESSNK RDG *YCLF*SQSAQTDYG*RKAELQSWRN*WWNGWGAY PLCK +A +RLIVEAML Subject 2436 WNYKGGNHTAQILHVLRKNRVEHSFGDGNTTS*LGQERI**E*KVCSL*LLPWSHR*ERA*T*GWCQESSNKGRDGC*YCLF*SQSAQTDYG*RKAELQSWRN*WWNGWGAY**PLCKCYA*MRLIVEAML 2828
Range 6: 2435 to 2620 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
134.9 bits(288) | 0.0 | 57/62(92%) | 0/62(0%) | Minus/Minus |
Query 10 VQARSHL*LQGRSQRLQTFHSH*ILSWPN*LVVFPSPNGCSTQFSRSTCKICAVWSPLL*FQ 195 VQARSHL*LQGRSQRLQTFHSH*ILSWPN*LVVFPSPN CST+F RSTCKICAVW P L*FQ Subject 2435 VQARSHL*LQGRSQRLQTFHSH*ILSWPN*LVVFPSPNECSTRFLRSTCKICAVWLPPL*FQ 2620
Range 7: 2663 to 2830 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
107.4 bits(228) | 0.0 | 51/56(91%) | 0/56(0%) | Minus/Minus |
Query 238 RSIASTISLIRA*RLQRGC**APQPFHH*FLQDWSSAFLQP*SV*AL*LQKRQY*R 405 RSIASTI+LI A* LQRG **APQPFHH*FLQDWSSAFLQP*SV*AL*LQKRQY*+ Subject 2663 RSIASTINLIHA*HLQRGY**APQPFHH*FLQDWSSAFLQP*SV*AL*LQKRQY*Q 2830
Rupestris stem pitting associated virus isolate BL1 28 kDa coat protein gene, complete cds
Sequence ID: DQ364979.1 Length: 867 Number of Matches: 7
Range 1: 455 to 847 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
314.9 bits(681) | 0.0 | 126/131(96%) | 0/131(0%) | Minus/Minus |
Query 12 GALLPLSALFVRDVCKGVVDKRPSRSTTNFSKIGAPLSFSHSLSEHFDFKRGNISDHLCFCWSSLDTTLRFKRALICDSKEEVKGCKLFILIKSFLGPISWWYSRLQMDVPHNFRVVHAKSAQCGHLSYNS 404 GALLPLSALFVR++CKGVVDKRPSRSTTNFSKIGAPLSFSHSLSEHFDFKRGNISDHLCFCWSS DT LRFKRALICDSKEEVKGCKLFILIKSFLGPISWWYSRLQMDVPHNF VVHAKSAQCGHLSYNS Subject 455 GALLPLSALFVRNICKGVVDKRPSRSTTNFSKIGAPLSFSHSLSEHFDFKRGNISDHLCFCWSSFDTNLRFKRALICDSKEEVKGCKLFILIKSFLGPISWWYSRLQMDVPHNFCVVHAKSAQCGHLSYNS 847
Range 2: 455 to 847 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
309.0 bits(668) | 0.0 | 130/131(99%) | 0/131(0%) | Plus/Plus |
Query 12 GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE*G**WKQCS 404 GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPK GVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE*G**WKQCS Subject 455 GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKVGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE*G**WKQCS 847
Range 3: 454 to 846 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
306.2 bits(662) | 0.0 | 127/131(97%) | 0/131(0%) | Plus/Plus |
Query 11 WNYKRGDHTAQILHVLRENCVEHPFGDGNTTS*LGQERI**E*KVCSL*LLPWSHR*ERA*T*GWCQESSNKSRDGR*YCLF*SQSAQTDYG*RKAELQSWRN*WWNGWGAYQQPLCKRHARIRLIVEAML 403 WNYKRGDHTAQILHVLR+NCVEHPFGDGNTTS*LGQERI**E*KVCSL*LLPWSHR*ERA*T*GWCQ+SSNKSRDGR*YCLF*SQSAQTDYG*RKAELQSWRN*WWNGWGAYQQPLCK +ARIRLIVEAML Subject 454 WNYKRGDHTAQILHVLRKNCVEHPFGDGNTTS*LGQERI**E*KVCSL*LLPWSHR*ERA*T*GWCQKSSNKSRDGR*YCLF*SQSAQTDYG*RKAELQSWRN*WWNGWGAYQQPLCKCYARIRLIVEAML 846
Range 4: 454 to 846 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
301.7 bits(652) | 0.0 | 130/131(99%) | 0/131(0%) | Minus/Minus |
Query 11 EHCFHYQPYSCVTFAKGLLISAPAVPPLISPRLELRFPSAIVCLSTLTSKEAILATISAFVGALLTPPLGSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSKWMFHTIFA*YMQNLRSVVTSLIIP 403 EHCFHYQPYSCVTFAKGLLISAPAVPPLISPRLELRFPSAIVCLSTLTSKEAILATISAFVGALLTP LGSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSKWMFHTIFA*YMQNLRSVVTSLIIP Subject 454 EHCFHYQPYSCVTFAKGLLISAPAVPPLISPRLELRFPSAIVCLSTLTSKEAILATISAFVGALLTPTLGSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSKWMFHTIFA*YMQNLRSVVTSLIIP 846
Range 5: 450 to 848 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
301.2 bits(651) | 0.0 | 127/133(95%) | 0/133(0%) | Plus/Plus |
Query 7 ILEL*ER*PHCADFACTTRKLCGTSIWRREYHQLIGPRKDLMRMKSLQPLTSSLESQMRARLNLRVVSRELQQKQRWSLILPLLKSKCSDRLWLKESGAPILEKLVVERLGRLSTTPLQTSRTNKADSGSNAP 405 +LEL*ER*PHCADFACTT+KLCGTSIWRREYHQLIGPRKDLMRMKSLQPLTSSLESQMRARLNLR+VS+ELQQKQRWSLILPLLKSKCSDRLWLKESGAPILEKLVVERLGRLSTTPLQ RTNKADSGSNAP Subject 450 LLEL*ER*PHCADFACTTQKLCGTSIWRREYHQLIGPRKDLMRMKSLQPLTSSLESQMRARLNLRLVSKELQQKQRWSLILPLLKSKCSDRLWLKESGAPILEKLVVERLGRLSTTPLQMLRTNKADSGSNAP 848
Range 6: 453 to 638 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
146.3 bits(313) | 0.0 | 61/62(98%) | 0/62(0%) | Minus/Minus |
Query 10 VQARSHL*LQGRSQRLQTFHSH*ILSWPN*LVVFPSPNGCSTQFSRSTCKICAVWSPLL*FQ 195 VQARSHL*LQGRSQRLQTFHSH*ILSWPN*LVVFPSPNGCSTQF RSTCKICAVWSPLL*FQ Subject 453 VQARSHL*LQGRSQRLQTFHSH*ILSWPN*LVVFPSPNGCSTQFLRSTCKICAVWSPLL*FQ 638
Range 7: 681 to 848 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
117.9 bits(251) | 0.0 | 55/56(98%) | 0/56(0%) | Minus/Minus |
Query 238 RSIASTISLIRA*RLQRGC**APQPFHH*FLQDWSSAFLQP*SV*AL*LQKRQY*R 405 RSIASTISLIRA* LQRGC**APQPFHH*FLQDWSSAFLQP*SV*AL*LQKRQY*R Subject 681 RSIASTISLIRA*HLQRGC**APQPFHH*FLQDWSSAFLQP*SV*AL*LQKRQY*R 848
Rupestris stem pitting associated virus isolate PGD2 28 kDa coat protein gene, complete cds
Sequence ID: DQ364984.1 Length: 867 Number of Matches: 7
Range 1: 455 to 847 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
313.1 bits(677) | 0.0 | 131/131(100%) | 0/131(0%) | Plus/Plus |
Query 12 GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE*G**WKQCS 404 GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE*G**WKQCS Subject 455 GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE*G**WKQCS 847
Range 2: 455 to 847 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
312.2 bits(675) | 0.0 | 123/131(94%) | 0/131(0%) | Minus/Minus |
Query 12 GALLPLSALFVRDVCKGVVDKRPSRSTTNFSKIGAPLSFSHSLSEHFDFKRGNISDHLCFCWSSLDTTLRFKRALICDSKEEVKGCKLFILIKSFLGPISWWYSRLQMDVPHNFRVVHAKSAQCGHLSYNS 404 GALLPLS LF+RD+CKGVVDKRPSRSTTNFSKIGAPLSFSHSLSEHFDFKRGNISDHLCFCWSSLDTTLRFKRALICDSKEEVKGCKLFILIKSFLGPISWWYSRLQMD+PHNF +VHAKSAQCG+L YNS Subject 455 GALLPLSTLFMRDICKGVVDKRPSRSTTNFSKIGAPLSFSHSLSEHFDFKRGNISDHLCFCWSSLDTTLRFKRALICDSKEEVKGCKLFILIKSFLGPISWWYSRLQMDIPHNFCIVHAKSAQCGYLPYNS 847
Range 3: 454 to 846 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
301.7 bits(652) | 0.0 | 129/131(98%) | 0/131(0%) | Minus/Minus |
Query 11 EHCFHYQPYSCVTFAKGLLISAPAVPPLISPRLELRFPSAIVCLSTLTSKEAILATISAFVGALLTPPLGSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSKWMFHTIFA*YMQNLRSVVTSLIIP 403 EHCFHYQPYSCVTFAKGLLISAPAVPPLISPRLELRFPSAIVCLSTLTSKEAILATISAFVGALLTPP GSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSKW+FHTIFA*YMQNLRSVVTSLIIP Subject 454 EHCFHYQPYSCVTFAKGLLISAPAVPPLISPRLELRFPSAIVCLSTLTSKEAILATISAFVGALLTPPFGSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSKWIFHTIFA*YMQNLRSVVTSLIIP 846
Range 4: 454 to 846 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
292.5 bits(632) | 0.0 | 123/131(94%) | 0/131(0%) | Plus/Plus |
Query 11 WNYKRGDHTAQILHVLRENCVEHPFGDGNTTS*LGQERI**E*KVCSL*LLPWSHR*ERA*T*GWCQESSNKSRDGR*YCLF*SQSAQTDYG*RKAELQSWRN*WWNGWGAYQQPLCKRHARIRLIVEAML 403 WNYK G+HTAQILHVL +NCVE+PFGDGNTTS*LGQERI**E*KVCSL*LLPWSHR*ERA*T GWCQESSNKSRDGR*YCLF*SQSAQTDYG*RKAELQSWRN*WWNGWGAYQQPLCK HA IRLIVEAML Subject 454 WNYKGGNHTAQILHVLCKNCVEYPFGDGNTTS*LGQERI**E*KVCSL*LLPWSHR*ERA*TEGWCQESSNKSRDGR*YCLF*SQSAQTDYG*RKAELQSWRN*WWNGWGAYQQPLCKCHA*IRLIVEAML 846
Range 5: 450 to 848 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
290.7 bits(628) | 0.0 | 124/133(93%) | 0/133(0%) | Plus/Plus |
Query 7 ILEL*ER*PHCADFACTTRKLCGTSIWRREYHQLIGPRKDLMRMKSLQPLTSSLESQMRARLNLRVVSRELQQKQRWSLILPLLKSKCSDRLWLKESGAPILEKLVVERLGRLSTTPLQTSRTNKADSGSNAP 405 +LEL* R*PHCADFACT +KLCG SIWRREYHQLIGPRKDLMRMKSLQPLTSSLESQMRARLN RVVSRELQQKQRWSLILPLLKSKCSDRLWLKESGAPILEKLVVERLGRLSTTPLQ SR NK DSGSNAP Subject 450 LLEL*GR*PHCADFACTMQKLCGISIWRREYHQLIGPRKDLMRMKSLQPLTSSLESQMRARLNRRVVSRELQQKQRWSLILPLLKSKCSDRLWLKESGAPILEKLVVERLGRLSTTPLQMSRMNKVDSGSNAP 848
Range 6: 453 to 638 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
133.0 bits(284) | 0.0 | 57/62(92%) | 0/62(0%) | Minus/Minus |
Query 10 VQARSHL*LQGRSQRLQTFHSH*ILSWPN*LVVFPSPNGCSTQFSRSTCKICAVWSPLL*FQ 195 VQARSHL*LQGRSQRLQTFHSH*ILSWPN*LVVFPSPNG STQF STCKICAVW P L*FQ Subject 453 VQARSHL*LQGRSQRLQTFHSH*ILSWPN*LVVFPSPNGYSTQFLHSTCKICAVWLPPL*FQ 638
Range 7: 681 to 848 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
114.2 bits(243) | 0.0 | 53/56(95%) | 0/56(0%) | Minus/Minus |
Query 238 RSIASTISLIRA*RLQRGC**APQPFHH*FLQDWSSAFLQP*SV*AL*LQKRQY*R 405 RSIASTI+LI A* LQRGC**APQPFHH*FLQDWSSAFLQP*SV*AL*LQKRQY*R Subject 681 RSIASTINLIHA*HLQRGC**APQPFHH*FLQDWSSAFLQP*SV*AL*LQKRQY*R 848
Rupestris stem pitting associated virus isolate VER84 SH 28 kDa coat protein gene, complete cds
Sequence ID: DQ364992.1 Length: 867 Number of Matches: 7
Range 1: 455 to 847 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
313.1 bits(677) | 0.0 | 131/131(100%) | 0/131(0%) | Plus/Plus |
Query 12 GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE*G**WKQCS 404 GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE*G**WKQCS Subject 455 GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE*G**WKQCS 847
Range 2: 454 to 846 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
300.3 bits(649) | 0.0 | 128/131(98%) | 0/131(0%) | Minus/Minus |
Query 11 EHCFHYQPYSCVTFAKGLLISAPAVPPLISPRLELRFPSAIVCLSTLTSKEAILATISAFVGALLTPPLGSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSKWMFHTIFA*YMQNLRSVVTSLIIP 403 EHCFHYQP+SCVTFAKGLLISAPAVPPLISPRLELRFPSAIVCLSTLTSKEAILATISAFVGALLTPPLGSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVS+WMFHTIFA*YMQNLR+VVTSLIIP Subject 454 EHCFHYQPHSCVTFAKGLLISAPAVPPLISPRLELRFPSAIVCLSTLTSKEAILATISAFVGALLTPPLGSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRWMFHTIFA*YMQNLRNVVTSLIIP 846
Range 3: 458 to 847 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
294.8 bits(637) | 0.0 | 116/130(89%) | 0/130(0%) | Minus/Minus |
Query 15 GALLPLSALFVRDVCKGVVDKRPSRSTTNFSKIGAPLSFSHSLSEHFDFKRGNISDHLCFCWSSLDTTLRFKRALICDSKEEVKGCKLFILIKSFLGPISWWYSRLQMDVPHNFRVVHAKSAQCGHLSYN 404 GALLPLS F+R++CKGVVDKRPSRSTTNFSKIGAPLSFSHSLSEHFDFKRGNISDHLCFCWSSLDTTLRFKRALICDSKEEVKGCKLFILIKSFLGP+SWWY RLQMDVPH+F +VHAKS CG+L YN Subject 458 GALLPLSTSFMRNICKGVVDKRPSRSTTNFSKIGAPLSFSHSLSEHFDFKRGNISDHLCFCWSSLDTTLRFKRALICDSKEEVKGCKLFILIKSFLGPVSWWYPRLQMDVPHDFCIVHAKST*CGYLPYN 847
Range 4: 453 to 848 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
272.3 bits(588) | 0.0 | 118/132(89%) | 0/132(0%) | Plus/Plus |
Query 10 LEL*ER*PHCADFACTTRKLCGTSIWRREYHQLIGPRKDLMRMKSLQPLTSSLESQMRARLNLRVVSRELQQKQRWSLILPLLKSKCSDRLWLKESGAPILEKLVVERLGRLSTTPLQTSRTNKADSGSNAP 405 L L* R*PH DFACT +K CGTSIWRR YHQL GPRKDLMRMKSLQPLTSSLESQMRARLNLRVVSRELQQKQRWSLILPLLKSKCSDRLWLKESGAPILEKLVVERLGRLSTTPLQ R N+ DSGSNAP Subject 453 LGL*GR*PHYVDFACTMQKSCGTSIWRRGYHQLTGPRKDLMRMKSLQPLTSSLESQMRARLNLRVVSRELQQKQRWSLILPLLKSKCSDRLWLKESGAPILEKLVVERLGRLSTTPLQMLRMNEVDSGSNAP 848
Range 5: 454 to 846 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
271.0 bits(585) | 0.0 | 116/131(89%) | 0/131(0%) | Plus/Plus |
Query 11 WNYKRGDHTAQILHVLRENCVEHPFGDGNTTS*LGQERI**E*KVCSL*LLPWSHR*ERA*T*GWCQESSNKSRDGR*YCLF*SQSAQTDYG*RKAELQSWRN*WWNGWGAYQQPLCKRHARIRLIVEAML 403 W+YK G+H ILHVL +N VEHP GDG+TTS*LGQERI**E*KVCSL*LLPWSHR*ERA*T*GWCQESSNKSRDGR*YCLF*SQSAQTDYG*RKAELQSWRN*WWNGWGAYQQPLCK +A +RLIVEAML Subject 454 WDYKGGNHIT*ILHVLCKNRVEHPSGDGDTTS*LGQERI**E*KVCSL*LLPWSHR*ERA*T*GWCQESSNKSRDGR*YCLF*SQSAQTDYG*RKAELQSWRN*WWNGWGAYQQPLCKCYA*MRLIVEAML 846
Range 6: 453 to 638 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
116.1 bits(247) | 0.0 | 50/62(81%) | 0/62(0%) | Minus/Minus |
Query 10 VQARSHL*LQGRSQRLQTFHSH*ILSWPN*LVVFPSPNGCSTQFSRSTCKICAVWSPLL*FQ 195 VQARSHL*LQGRSQRLQTFHSH*ILSWP+*LVV PSP+GCST+F STCKI +W P L* Q Subject 453 VQARSHL*LQGRSQRLQTFHSH*ILSWPS*LVVSPSPDGCSTRFLHSTCKIYVMWLPPL*SQ 638
Range 7: 681 to 848 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
114.2 bits(243) | 0.0 | 53/56(95%) | 0/56(0%) | Minus/Minus |
Query 238 RSIASTISLIRA*RLQRGC**APQPFHH*FLQDWSSAFLQP*SV*AL*LQKRQY*R 405 RSIASTI+LI A* LQRGC**APQPFHH*FLQDWSSAFLQP*SV*AL*LQKRQY*R Subject 681 RSIASTINLIHA*HLQRGC**APQPFHH*FLQDWSSAFLQP*SV*AL*LQKRQY*R 848
Rupestris stem pitting associated virus isolate CF6 28 kDa coat protein gene, complete cds
Sequence ID: DQ364994.1 Length: 867 Number of Matches: 7
Range 1: 455 to 847 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
313.1 bits(677) | 0.0 | 131/131(100%) | 0/131(0%) | Plus/Plus |
Query 12 GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE*G**WKQCS 404 GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE*G**WKQCS Subject 455 GIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGVKRAPTKAEMVANIASFEVKVLRQTMAEGKRSSNLGEISGGTAGALINNPFANVTHE*G**WKQCS 847
Range 2: 454 to 846 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
300.3 bits(649) | 0.0 | 128/131(98%) | 0/131(0%) | Minus/Minus |
Query 11 EHCFHYQPYSCVTFAKGLLISAPAVPPLISPRLELRFPSAIVCLSTLTSKEAILATISAFVGALLTPPLGSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSKWMFHTIFA*YMQNLRSVVTSLIIP 403 EHCFHYQP+SCVTFAKGLLISAPAVPPLISPRLELRFPSAIVCLSTLTSKEAILATISAFVGALLTPPLGSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVS+WMFHTIFA*YMQNLR+VVTSLIIP Subject 454 EHCFHYQPHSCVTFAKGLLISAPAVPPLISPRLELRFPSAIVCLSTLTSKEAILATISAFVGALLTPPLGSSALSSVTPRKKSKAANFSFSLNPFLAQLAGGIPVSRWMFHTIFA*YMQNLRNVVTSLIIP 846
Range 3: 458 to 847 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
294.8 bits(637) | 0.0 | 116/130(89%) | 0/130(0%) | Minus/Minus |
Query 15 GALLPLSALFVRDVCKGVVDKRPSRSTTNFSKIGAPLSFSHSLSEHFDFKRGNISDHLCFCWSSLDTTLRFKRALICDSKEEVKGCKLFILIKSFLGPISWWYSRLQMDVPHNFRVVHAKSAQCGHLSYN 404 GALLPLS F+R++CKGVVDKRPSRSTTNFSKIGAPLSFSHSLSEHFDFKRGNISDHLCFCWSSLDTTLRFKRALICDSKEEVKGCKLFILIKSFLGP+SWWY RLQMDVPH+F +VHAKS CG+L YN Subject 458 GALLPLSTSFMRNICKGVVDKRPSRSTTNFSKIGAPLSFSHSLSEHFDFKRGNISDHLCFCWSSLDTTLRFKRALICDSKEEVKGCKLFILIKSFLGPVSWWYPRLQMDVPHDFCIVHAKST*CGYLPYN 847
Range 4: 453 to 848 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
272.3 bits(588) | 0.0 | 118/132(89%) | 0/132(0%) | Plus/Plus |
Query 10 LEL*ER*PHCADFACTTRKLCGTSIWRREYHQLIGPRKDLMRMKSLQPLTSSLESQMRARLNLRVVSRELQQKQRWSLILPLLKSKCSDRLWLKESGAPILEKLVVERLGRLSTTPLQTSRTNKADSGSNAP 405 L L* R*PH DFACT +K CGTSIWRR YHQL GPRKDLMRMKSLQPLTSSLESQMRARLNLRVVSRELQQKQRWSLILPLLKSKCSDRLWLKESGAPILEKLVVERLGRLSTTPLQ R N+ DSGSNAP Subject 453 LGL*GR*PHYVDFACTMQKSCGTSIWRRGYHQLTGPRKDLMRMKSLQPLTSSLESQMRARLNLRVVSRELQQKQRWSLILPLLKSKCSDRLWLKESGAPILEKLVVERLGRLSTTPLQMLRMNEVDSGSNAP 848
Range 5: 454 to 846 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
271.0 bits(585) | 0.0 | 116/131(89%) | 0/131(0%) | Plus/Plus |
Query 11 WNYKRGDHTAQILHVLRENCVEHPFGDGNTTS*LGQERI**E*KVCSL*LLPWSHR*ERA*T*GWCQESSNKSRDGR*YCLF*SQSAQTDYG*RKAELQSWRN*WWNGWGAYQQPLCKRHARIRLIVEAML 403 W+YK G+H ILHVL +N VEHP GDG+TTS*LGQERI**E*KVCSL*LLPWSHR*ERA*T*GWCQESSNKSRDGR*YCLF*SQSAQTDYG*RKAELQSWRN*WWNGWGAYQQPLCK +A +RLIVEAML Subject 454 WDYKGGNHIT*ILHVLCKNRVEHPSGDGDTTS*LGQERI**E*KVCSL*LLPWSHR*ERA*T*GWCQESSNKSRDGR*YCLF*SQSAQTDYG*RKAELQSWRN*WWNGWGAYQQPLCKCYA*MRLIVEAML 846
Range 6: 453 to 638 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
116.1 bits(247) | 0.0 | 50/62(81%) | 0/62(0%) | Minus/Minus |
Query 10 VQARSHL*LQGRSQRLQTFHSH*ILSWPN*LVVFPSPNGCSTQFSRSTCKICAVWSPLL*FQ 195 VQARSHL*LQGRSQRLQTFHSH*ILSWP+*LVV PSP+GCST+F STCKI +W P L* Q Subject 453 VQARSHL*LQGRSQRLQTFHSH*ILSWPS*LVVSPSPDGCSTRFLHSTCKIYVMWLPPL*SQ 638
Range 7: 681 to 848 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
114.2 bits(243) | 0.0 | 53/56(95%) | 0/56(0%) | Minus/Minus |
Query 238 RSIASTISLIRA*RLQRGC**APQPFHH*FLQDWSSAFLQP*SV*AL*LQKRQY*R 405 RSIASTI+LI A* LQRGC**APQPFHH*FLQDWSSAFLQP*SV*AL*LQKRQY*R Subject 681 RSIASTINLIHA*HLQRGC**APQPFHH*FLQDWSSAFLQP*SV*AL*LQKRQY*R 848
Nucleotide Sequence (184 letters)
Query ID: | ds2016-133_14 |
Query definition: | No definition line |
Query length: | 603 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
125.2 | 522.4 | 15% | 5.673e-28 | 59% | AY368590.1 | |
124.3 | 453.6 | 21% | 1.071e-27 | 64% | AB277783.1 | |
123.4 | 486.6 | 21% | 2.021e-27 | 64% | KX274275.1 | |
117.9 | 183.6 | 30% | 9.12e-26 | 52% | AY881626.1 | |
117.9 | 181.8 | 30% | 9.12e-26 | 50% | JX559646.1 |
Alignments
Rupestris stem pitting associated virus strain Syrah, complete genome
Sequence ID: AY368590.1 Length: 8742 Number of Matches: 7
Range 1: 6586 to 6756 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
125.2 bits(267) | 0.0 | 54/57(95%) | 0/57(0%) | Minus/Plus |
Query 13 LVKALSTFEFVGVYSVLRFPVVVHSVPGSSKSSLIRELITEDESFTAFTAGVPNTPN 183 LVKALSTFEFVGVYSVLRFPVVVHSVPGS KSSLIRELITEDESF AFTAGVP+TPN Subject 6586 LVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGVPDTPN 6756
Range 2: 6586 to 6756 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.9 bits(216) | 0.0 | 43/57(75%) | 0/57(0%) | Plus/Minus |
Query 13 VGCVWNSGCEGCETLVLSDELSYQTTFTATRNTMNDNWKSEHTIDTHKLKRRQSFN* 183 V V N+G E ETLV S+ELSYQTTFT TRN MN+NWKSEH I+THKLKRRQSFN* Subject 6586 VWSVGNAGRESYETLVFSNELSYQTTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN* 6756
Range 3: 6585 to 6755 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
93.6 bits(198) | 0.0 | 44/57(77%) | 0/57(0%) | Minus/Plus |
Query 14 LS*SFVYV*VCGCL*CAQISSCRS*CSW*Q*K*SDKRAHH*GREFHSLHSRSSKHTQ 184 LS*SFVYV*VCGCL* AQISSC S* SW* *K* DKRAH+* REFHS H R S+H++ Subject 6585 LS*SFVYV*VCGCL*RAQISSCCS*RSW*W*K*FDKRAHY*RREFHSFHGRRSRHSK 6755
Range 4: 6587 to 6718 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
80.8 bits(170) | 0.0 | 37/44(84%) | 0/44(0%) | Plus/Minus |
Query 51 NSRPQ**ALLSDYFYCYQEHYERQLEI*AHYRHPQTQT*TKL*L 182 NSR Q**ALLS+YFY YQE YE+QLEI*A Y+HPQTQT*TKL*L Subject 6587 NSRLQ**ALLSNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*L 6718
Range 5: 6587 to 6658 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
50.1 bits(103) | 0.0 | 21/24(88%) | 0/24(0%) | Minus/Plus |
Query 111 *LKLCLRLSLWVSIVCSDFQLSFI 182 *LKLCLRLSLWV I CSDFQL FI Subject 6587 *LKLCLRLSLWVFIACSDFQLLFI 6658
Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OB1
Sequence ID: AB277783.1 Length: 2876 Number of Matches: 6
Range 1: 842 to 1012 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
124.3 bits(265) | 0.0 | 52/57(91%) | 0/57(0%) | Minus/Plus |
Query 13 LVKALSTFEFVGVYSVLRFPVVVHSVPGSSKSSLIRELITEDESFTAFTAGVPNTPN 183 LVKALSTFEFVG+YSVLRFPVVVHSVPGS KSSLIREL+TEDESF AFTAGVP+TPN Subject 842 LVKALSTFEFVGIYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPN 1012
Range 2: 842 to 1012 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
98.7 bits(209) | 0.0 | 41/57(72%) | 0/57(0%) | Plus/Minus |
Query 13 VGCVWNSGCEGCETLVLSDELSYQTTFTATRNTMNDNWKSEHTIDTHKLKRRQSFN* 183 VG V N+G +G ETLVLSD+ SY T FT TRN +N+NWKSEH I+THKLKRRQSFN* Subject 842 VGSVGNAGRKGYETLVLSDKFSY*TAFTTTRNAVNNNWKSEHAINTHKLKRRQSFN* 1012
Range 3: 841 to 1011 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
82.2 bits(173) | 0.0 | 41/57(72%) | 0/57(0%) | Minus/Plus |
Query 14 LS*SFVYV*VCGCL*CAQISSCRS*CSW*Q*K*SDKRAHH*GREFHSLHSRSSKHTQ 184 LS*SFVYV*VCG L* AQISSC S SW* *K +KR H*GREFHSL+ R S+H+Q Subject 841 LS*SFVYV*VCGYL*RAQISSCCSQRSW*W*KQFNKRTCH*GREFHSLYGRRSRHSQ 1011
Range 4: 843 to 1010 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
68.9 bits(144) | 0.0 | 40/56(71%) | 0/56(0%) | Plus/Minus |
Query 15 WVCXXXXXXXXXNSRPQ**ALLSDYFYCYQEHYERQLEI*AHYRHPQTQT*TKL*L 182 W C E R *RL*NSRPQ* LL + FY YQE E+QLEI*A Y++PQTQT*TKL*L Subject 843 WECRERRP*RL*NSRPQ*QVLLLNCFYHYQERCEQQLEI*ARYKYPQTQT*TKL*L 1010
Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome
Sequence ID: KX274275.1 Length: 8724 Number of Matches: 6
Range 1: 6586 to 6756 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.4 bits(263) | 0.0 | 52/57(91%) | 0/57(0%) | Minus/Plus |
Query 13 LVKALSTFEFVGVYSVLRFPVVVHSVPGSSKSSLIRELITEDESFTAFTAGVPNTPN 183 LVKALSTFEFVGVYSVLRFPVVVHSVPGS KSSLIREL+TEDE+F AFTAGVP+TPN Subject 6586 LVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELVTEDENFIAFTAGVPDTPN 6756
Range 2: 6586 to 6756 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
104.2 bits(221) | 0.0 | 43/57(75%) | 0/57(0%) | Plus/Minus |
Query 13 VGCVWNSGCEGCETLVLSDELSYQTTFTATRNTMNDNWKSEHTIDTHKLKRRQSFN* 183 VGCV N+G +G E LVLSD+ SY TTFT TRN MN+NWKSEH I+THKLKRRQSFN* Subject 6586 VGCVRNAGRKGYEILVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN* 6756
Range 3: 6585 to 6755 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.9 bits(192) | 0.0 | 45/57(79%) | 0/57(0%) | Minus/Plus |
Query 14 LS*SFVYV*VCGCL*CAQISSCRS*CSW*Q*K*SDKRAHH*GREFHSLHSRSSKHTQ 184 LS*SFVYV*VCGCL* AQISSC S* SW* *K* +KR H*GREFHSL+ R S HTQ Subject 6585 LS*SFVYV*VCGCL*RAQISSCCS*RSW*W*K*FNKRTCH*GREFHSLYGRRS*HTQ 6755
Range 4: 6587 to 6754 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
82.6 bits(174) | 0.0 | 44/56(79%) | 0/56(0%) | Plus/Minus |
Query 15 WVCXXXXXXXXXNSRPQ**ALLSDYFYCYQEHYERQLEI*AHYRHPQTQT*TKL*L 182 WVC E R *RL*NSRPQ* LL +YFY YQE YE+QLEI*A Y+HPQTQT*TKL*L Subject 6587 WVCQERRP*RL*NSRPQ*QVLLLNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*L 6754
Rupestris stem pitting associated virus strain SG1, complete genome
Sequence ID: AY881626.1 Length: 8742 Number of Matches: 2
Range 1: 6586 to 6756 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
117.9 bits(251) | 0.0 | 48/57(84%) | 0/57(0%) | Minus/Plus |
Query 13 LVKALSTFEFVGVYSVLRFPVVVHSVPGSSKSSLIRELITEDESFTAFTAGVPNTPN 183 LVKALSTFEF+GV+SVL+FPVV+HSVPGS KSSLIRELI+EDESF AFTAGVP++PN Subject 6586 LVKALSTFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPN 6756
Range 2: 6589 to 6756 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
65.7 bits(137) | 0.0 | 29/56(52%) | 0/56(0%) | Plus/Minus |
Query 13 VGCVWNSGCEGCETLVLSDELSYQTTFTATRNTMNDNWKSEHTIDTHKLKRRQSFN 180 V +WN+ CE ETLVL D L Y TT T R TM ++WK +HT +T+KL+ Q FN Subject 6589 VRTIWNTCCESHETLVL*D*LPY*TTLTTARYTMYNDWKFKHTENTYKLEG*QCFN 6756
Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome
Sequence ID: JX559646.1 Length: 8726 Number of Matches: 2
Range 1: 6586 to 6756 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
117.9 bits(251) | 0.0 | 48/57(84%) | 0/57(0%) | Minus/Plus |
Query 13 LVKALSTFEFVGVYSVLRFPVVVHSVPGSSKSSLIRELITEDESFTAFTAGVPNTPN 183 LVKALSTFEF+GV+SVL+FPVV+HSVPGS KSSLIRELI+EDESF AFTAGVP++PN Subject 6586 LVKALSTFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAFTAGVPDSPN 6756
Range 2: 6589 to 6756 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
63.8 bits(133) | 0.0 | 28/56(50%) | 0/56(0%) | Plus/Minus |
Query 13 VGCVWNSGCEGCETLVLSDELSYQTTFTATRNTMNDNWKSEHTIDTHKLKRRQSFN 180 V +WN+ CE ETLVL D L Y TT T R TM ++WK +HT +T+K + Q FN Subject 6589 VRTIWNTCCESHETLVL*D*LPY*TTLTTARYTMYNDWKFKHTENTYKFEG*QCFN 6756
Nucleotide Sequence (348 letters)
Query ID: | ds2016-133_14 |
Query definition: | No definition line |
Query length: | 603 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
223.2 | 908.1 | 28% | 1.006e-56 | 62% | AY881626.1 | |
223.2 | 909.4 | 28% | 1.006e-56 | 62% | JX559646.1 | |
223.2 | 889.3 | 28% | 1.006e-56 | 61% | KC427107.1 | |
222.8 | 1115.2 | 27% | 1.382e-56 | 81% | AY881627.1 | |
220.9 | 892.9 | 20% | 4.921e-56 | 63% | FR691076.1 |
Alignments
Rupestris stem pitting associated virus strain SG1, complete genome
Sequence ID: AY881626.1 Length: 8742 Number of Matches: 6
Range 1: 457 to 759 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
223.2 bits(481) | 0.0 | 93/101(92%) | 0/101(0%) | Plus/Plus |
Query 14 FGLEFVISSSDKSNHVVSKKGIGDSDTLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYKISDGQL 316 +G EFVISSSDKS+ ++SKKGIGDS TLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYKISD QL Subject 457 YGSEFVISSSDKSSQIISKKGIGDSSTLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYKISDDQL 759
Range 2: 459 to 749 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
164.2 bits(352) | 0.0 | 88/97(91%) | 0/97(0%) | Minus/Minus |
Query 16 SLILY**AQGLRLSGEPTSTSGGITAVAKSILGFATSKKLMRSLIDQ**ISSCRKRFRAPVEITRGTNLRSVSESPIPFXXXXXXXXXXXLITNSKP 306 SLILY**AQGLRLSGEPTSTSGGITAVAKSILG ATSKK +RSLIDQ**ISSCRKRF APVEITRGTNLRSV ESP+PFLL WLDLSLELITNS P Subject 459 SLILY**AQGLRLSGEPTSTSGGITAVAKSILGLATSKKFIRSLIDQ**ISSCRKRFLAPVEITRGTNLRSVLESPMPFLLMIWLDLSLELITNSDP 749
Range 3: 460 to 729 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
150.9 bits(323) | 0.0 | 56/90(62%) | 0/90(0%) | Minus/Minus |
Query 17 GPRIEAFRRANQHLWRNYCSCQEHTWLCNIQKINEIAD*PVMNLIMQEKIPSTCGNYARNQSPECVRITNTLLADNMVRLVTRAYHKFQT 286 GPR++AFRR NQH W ++ SCQ+HTWL +IQ+I +IA+*PVMN IMQ+KIPSTCGN+AR+Q PEC +TN LA+++ VTR YHKF++ Subject 460 GPRVKAFRRTNQHFWGDHRSCQKHTWLSHIQEIYQIAN*PVMNFIMQKKIPSTCGNHARDQPPECTGVTNAFLANDLA*FVTRTYHKFRS 729
Range 4: 467 to 757 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
133.0 bits(284) | 0.0 | 62/97(64%) | 0/97(0%) | Plus/Plus |
Query 24 NL**ALVTSLTMLSARRVLVILTHSGDWFRA*FPQVLGIFSCMMRFITGQSAISLIFWMLQSQVCSWQLQ*FLQRCWLALLKASILGPINIRSVMAS 314 NL** LVT+ AR+ LV HSG W RA*FPQVLGIF CMM+FITGQ AI I WM SQVC WQL+* Q+CWL LLKA LGPI+ + VM S Subject 467 NL**VLVTNQAKSLARKALVTPVHSGGWSRA*FPQVLGIFFCMMKFITGQLAI**ISWMWLSQVCFWQLR*SPQKCWLVLLKALTLGPISTKLVMIS 757
Range 5: 456 to 737 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.0 bits(273) | 0.0 | 59/94(63%) | 0/94(0%) | Plus/Plus |
Query 13 VWFGICDKL**QV*PCCQQEGYW*F*HTPEIGSARNFHRCSESFPA**DSLLVNQRSH*FFGCCKAKYALGNCSNSSRGAGWLS*KPQSLGLSI 294 VW ICDK **Q+ P QE +W* +TPE+G AR+FHRC ESF A**+SLLVN RS F GC AKYA GNC + R AGW S*KP LGLS+ Subject 456 VWI*ICDKF**QIKPNH*QERHW*LQYTPEVGPARDFHRC*ESFSA**NSLLVN*RSDKFLGCG*AKYAFGNCGDPPRSAGWFS*KP*PLGLSV 737
Range 6: 455 to 751 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
108.7 bits(231) | 0.0 | 64/99(65%) | 0/99(0%) | Minus/Minus |
Query 12 HH*SYIDRPKD*GFXXXXXXXXXXXXXXPRAYLALQHPKN**DR*LTSNESHHAGKDSEHLWKLRAEPISGVCQNHQYPSC*QHG*TCH*SLSQIPNQT 308 HH* DRPK *GFQE+QPA L QLP+AYLA HP+N DR*LTSNE HHA KDS HLWK RA P SGV +HQ SC* G CH*+LSQI T Subject 455 HH*FCTDRPKG*GFQENQPALLGGSPQLPKAYLA*PHPRNLSDR*LTSNEFHHAEKDS*HLWKSRAGPTSGVYWSHQCLSC**FGLICH*NLSQIQIHT 751
Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome
Sequence ID: JX559646.1 Length: 8726 Number of Matches: 6
Range 1: 457 to 759 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
223.2 bits(481) | 0.0 | 93/101(92%) | 0/101(0%) | Plus/Plus |
Query 14 FGLEFVISSSDKSNHVVSKKGIGDSDTLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYKISDGQL 316 +G EFVISSSDKS+ ++SKKGIGDS TLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYKISD QL Subject 457 YGSEFVISSSDKSSQIISKKGIGDSSTLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYKISDDQL 759
Range 2: 459 to 749 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
164.2 bits(352) | 0.0 | 88/97(91%) | 0/97(0%) | Minus/Minus |
Query 16 SLILY**AQGLRLSGEPTSTSGGITAVAKSILGFATSKKLMRSLIDQ**ISSCRKRFRAPVEITRGTNLRSVSESPIPFXXXXXXXXXXXLITNSKP 306 SLILY**AQGLRLSGEPTSTSGGITAVAKSILG ATSKK +RSLIDQ**ISSCRKRF APVEITRGTNLRSV ESP+PFLL WLDLSLELITNS P Subject 459 SLILY**AQGLRLSGEPTSTSGGITAVAKSILGLATSKKFIRSLIDQ**ISSCRKRFLAPVEITRGTNLRSVLESPMPFLLMIWLDLSLELITNSDP 749
Range 3: 460 to 729 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
150.9 bits(323) | 0.0 | 56/90(62%) | 0/90(0%) | Minus/Minus |
Query 17 GPRIEAFRRANQHLWRNYCSCQEHTWLCNIQKINEIAD*PVMNLIMQEKIPSTCGNYARNQSPECVRITNTLLADNMVRLVTRAYHKFQT 286 GPR++AFRR NQH W ++ SCQ+HTWL +IQ+I +IA+*PVMN IMQ+KIPSTCGN+AR+Q PEC +TN LA+++ VTR YHKF++ Subject 460 GPRVKAFRRTNQHFWGDHRSCQKHTWLSHIQEIYQIAN*PVMNFIMQKKIPSTCGNHARDQPPECAGVTNAFLANDLA*FVTRTYHKFRS 729
Range 4: 456 to 737 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
130.7 bits(279) | 0.0 | 60/94(64%) | 0/94(0%) | Plus/Plus |
Query 13 VWFGICDKL**QV*PCCQQEGYW*F*HTPEIGSARNFHRCSESFPA**DSLLVNQRSH*FFGCCKAKYALGNCSNSSRGAGWLS*KPQSLGLSI 294 VW ICDK **Q+ P QE +W* HTPE+G AR+FHRC ESF A**+SLLVN RS F GC AKYA GNC + R AGW S*KP LGLS+ Subject 456 VWI*ICDKF**QIKPNH*QERHW*LQHTPEVGPARDFHRC*ESFSA**NSLLVN*RSDKFLGCG*AKYAFGNCGDPPRSAGWFS*KP*PLGLSV 737
Range 5: 467 to 757 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
130.3 bits(278) | 0.0 | 61/97(63%) | 0/97(0%) | Plus/Plus |
Query 24 NL**ALVTSLTMLSARRVLVILTHSGDWFRA*FPQVLGIFSCMMRFITGQSAISLIFWMLQSQVCSWQLQ*FLQRCWLALLKASILGPINIRSVMAS 314 NL** LVT+ AR+ LV HSG W RA*FPQVLGIF CMM+FITGQ AI I WM SQVC WQL+* Q+CWL LLKA LGPI+ + V S Subject 467 NL**VLVTNQAKSLARKALVTPAHSGGWSRA*FPQVLGIFFCMMKFITGQLAI**ISWMWLSQVCFWQLR*SPQKCWLVLLKALTLGPISTKLVTIS 757
Range 6: 455 to 748 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
110.1 bits(234) | 0.0 | 64/98(65%) | 0/98(0%) | Minus/Minus |
Query 12 H*SYIDRPKD*GFXXXXXXXXXXXXXXPRAYLALQHPKN**DR*LTSNESHHAGKDSEHLWKLRAEPISGVCQNHQYPSC*QHG*TCH*SLSQIPNQT 305 H* DRPK *GFQE+QPA L QLP+AYLA HP+N DR*LTSNE HHA KDS HLWK RA P SGVC +HQ SC* G CH*+LSQI T Subject 455 H*FCTDRPKG*GFQENQPALLGGSPQLPKAYLA*PHPRNLSDR*LTSNEFHHAEKDS*HLWKSRAGPTSGVCWSHQCLSC**FGLICH*NLSQIQIHT 748
Grapevine rupestris stem pitting associated virus isolate GRSPaV WA, complete genome
Sequence ID: KC427107.1 Length: 8742 Number of Matches: 6
Range 1: 457 to 759 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
223.2 bits(481) | 0.0 | 93/101(92%) | 0/101(0%) | Plus/Plus |
Query 14 FGLEFVISSSDKSNHVVSKKGIGDSDTLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYKISDGQL 316 +G EFVISSSDKS+ ++SKKGIGDS TLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYKISD QL Subject 457 YGSEFVISSSDKSSQIISKKGIGDSSTLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYKISDDQL 759
Range 2: 459 to 749 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
164.2 bits(352) | 0.0 | 88/97(91%) | 0/97(0%) | Minus/Minus |
Query 16 SLILY**AQGLRLSGEPTSTSGGITAVAKSILGFATSKKLMRSLIDQ**ISSCRKRFRAPVEITRGTNLRSVSESPIPFXXXXXXXXXXXLITNSKP 306 SLILY**AQGLRLSGEPTSTSGGITAVAKSILG ATSKK +RSLIDQ**ISSCRKRF APVEITRGTNLRSV ESP+PFLL WLDLSLELITNS P Subject 459 SLILY**AQGLRLSGEPTSTSGGITAVAKSILGLATSKKFIRSLIDQ**ISSCRKRFLAPVEITRGTNLRSVLESPMPFLLMIWLDLSLELITNSDP 749
Range 3: 460 to 729 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
150.4 bits(322) | 0.0 | 55/90(61%) | 0/90(0%) | Minus/Minus |
Query 17 GPRIEAFRRANQHLWRNYCSCQEHTWLCNIQKINEIAD*PVMNLIMQEKIPSTCGNYARNQSPECVRITNTLLADNMVRLVTRAYHKFQT 286 GPR++AFRR NQH W ++ SCQ+HTWL +IQ+I +IA+*PVMN IMQ+KIPSTCGN+AR+Q PEC +TN LA+++ +TR YHKF++ Subject 460 GPRVKAFRRTNQHFWGDHRSCQKHTWLSHIQEIYQIAN*PVMNFIMQKKIPSTCGNHARDQPPECTGVTNAFLANDLA*FITRTYHKFRS 729
Range 4: 467 to 757 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
127.5 bits(272) | 0.0 | 60/97(62%) | 0/97(0%) | Plus/Plus |
Query 24 NL**ALVTSLTMLSARRVLVILTHSGDWFRA*FPQVLGIFSCMMRFITGQSAISLIFWMLQSQVCSWQLQ*FLQRCWLALLKASILGPINIRSVMAS 314 NL** LV + AR+ LV HSG W RA*FPQVLGIF CMM+FITGQ AI I WM SQVC WQL+* Q+CWL LLKA LGPI+ + V S Subject 467 NL**VLVINQAKSLARKALVTPVHSGGWSRA*FPQVLGIFFCMMKFITGQLAI**ISWMWLSQVCFWQLR*SPQKCWLVLLKALTLGPISTKLVTIS 757
Range 5: 456 to 737 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.9 bits(264) | 0.0 | 58/94(62%) | 0/94(0%) | Plus/Plus |
Query 13 VWFGICDKL**QV*PCCQQEGYW*F*HTPEIGSARNFHRCSESFPA**DSLLVNQRSH*FFGCCKAKYALGNCSNSSRGAGWLS*KPQSLGLSI 294 VW ICDK ** + P QE +W* +TPE+G AR+FHRC ESF A**+SLLVN RS F GC AKYA GNC + R AGW S*KP LGLS+ Subject 456 VWI*ICDKF***IKPNH*QERHW*LQYTPEVGPARDFHRC*ESFSA**NSLLVN*RSDKFLGCG*AKYAFGNCGDPPRSAGWFS*KP*PLGLSV 737
Range 6: 455 to 748 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
100.0 bits(212) | 0.0 | 62/98(63%) | 0/98(0%) | Minus/Minus |
Query 12 H*SYIDRPKD*GFXXXXXXXXXXXXXXPRAYLALQHPKN**DR*LTSNESHHAGKDSEHLWKLRAEPISGVCQNHQYPSC*QHG*TCH*SLSQIPNQT 305 H* DRPK *GFQE+QPA L QLP+AYLA HP+N DR*LTSNE HHA KDS HLWK RA P SGV +HQ SC* G H*+LSQI T Subject 455 H*FCTDRPKG*GFQENQPALLGGSPQLPKAYLA*PHPRNLSDR*LTSNEFHHAEKDS*HLWKSRAGPTSGVYWSHQCLSC**FGLIYH*NLSQIQIHT 748
Rupestris stem pitting associated virus strain BS, complete genome
Sequence ID: AY881627.1 Length: 8743 Number of Matches: 6
Range 1: 457 to 759 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
222.8 bits(480) | 0.0 | 92/101(91%) | 0/101(0%) | Plus/Plus |
Query 14 FGLEFVISSSDKSNHVVSKKGIGDSDTLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYKISDGQL 316 +G EFVISSSDKS+ V+SKKGIGDSDTLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQY++S+ QL Subject 457 YGSEFVISSSDKSSQVISKKGIGDSDTLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYRVSNNQL 759
Range 2: 463 to 729 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
201.3 bits(433) | 0.0 | 77/89(87%) | 0/89(0%) | Minus/Minus |
Query 20 GPRIEAFRRANQHLWRNYCSCQEHTWLCNIQKINEIAD*PVMNLIMQEKIPSTCGNYARNQSPECVRITNTLLADNMVRLVTRAYHKFQ 286 GPRIEAFRRANQHLWRN+CSCQEHTWLCNIQKINEIAD*PVMNLIMQEKIPSTCGNYARNQ PECVRI NTLLA+++ +TR YHKF+ Subject 463 GPRIEAFRRANQHLWRNHCSCQEHTWLCNIQKINEIAD*PVMNLIMQEKIPSTCGNYARNQPPECVRIANTLLANDLTGFITRTYHKFR 729
Range 3: 456 to 758 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
190.8 bits(410) | 0.0 | 82/101(81%) | 0/101(0%) | Plus/Plus |
Query 13 VWFGICDKL**QV*PCCQQEGYW*F*HTPEIGSARNFHRCSESFPA**DSLLVNQRSH*FFGCCKAKYALGNCSNSSRGAGWLS*KPQSLGLSI*DQ*WPV 315 VW ICDK ** + QEGYW F*HTPE+GSARNFHRCSESFPA**DSLLVNQRSH*FFGCCKAKYALGNCS+SSRGAGWLS*KPQSLGL + Q* P+ Subject 456 VWV*ICDKF***IQSSH*QEGYWRF*HTPEVGSARNFHRCSESFPA**DSLLVNQRSH*FFGCCKAKYALGNCSDSSRGAGWLS*KPQSLGLPVQSQ*QPI 758
Range 4: 467 to 748 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
182.1 bits(391) | 0.0 | 80/94(85%) | 0/94(0%) | Plus/Plus |
Query 24 NL**ALVTSLTMLSARRVLVILTHSGDWFRA*FPQVLGIFSCMMRFITGQSAISLIFWMLQSQVCSWQLQ*FLQRCWLALLKASILGPINIRSV 305 NL** LV + ARRVL ILTHSG WFRA*FPQVLGIFSCMMRFITGQSAISLIFWMLQSQVCSWQLQ*FLQRCWLALLKASILGP + SV Subject 467 NL**VLVINPVKSLARRVLAILTHSGGWFRA*FPQVLGIFSCMMRFITGQSAISLIFWMLQSQVCSWQLQ*FLQRCWLALLKASILGPTSTESV 748
Range 5: 459 to 758 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
175.6 bits(377) | 0.0 | 93/100(93%) | 0/100(0%) | Minus/Minus |
Query 16 NWPSLILY**AQGLRLSGEPTSTSGGITAVAKSILGFATSKKLMRSLIDQ**ISSCRKRFRAPVEITRGTNLRSVSESPIPFXXXXXXXXXXXLITNSKP 315 NW L LY *AQGLRLSGEPTSTSGGITAVAKSILGFATSKKLMRSLIDQ**ISSCRKRFRAPVEITRGTNLRSVSESPIPFLL T LDLSLELITNS P Subject 459 NWLLLTLYW*AQGLRLSGEPTSTSGGITAVAKSILGFATSKKLMRSLIDQ**ISSCRKRFRAPVEITRGTNLRSVSESPIPFLLMT*LDLSLELITNSDP 758
Range 6: 452 to 730 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
142.7 bits(305) | 0.0 | 79/93(85%) | 0/93(0%) | Minus/Minus |
Query 9 RPKD*GFXXXXXXXXXXXXXXPRAYLALQHPKN**DR*LTSNESHHAGKDSEHLWKLRAEPISGVCQNHQYPSC*QHG*TCH*SLSQIPNQTH 287 RPKD*GFQESQPAPLEE LQLPRAYLALQHPKN**DR*LTSNESHHAGKDSEHLWKLRAEP SGVCQN QYPSC* H*+LSQI T+ Subject 452 RPKD*GFQESQPAPLEESLQLPRAYLALQHPKN**DR*LTSNESHHAGKDSEHLWKLRAEPTSGVCQNRQYPSC**LDWIYH*NLSQIQTHTY 730
Grapevine rupestris stem pitting associated virus complete genome, genomic RNA, isolate GRSPaV MG
Sequence ID: FR691076.1 Length: 8749 Number of Matches: 6
Range 1: 457 to 759 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
220.9 bits(476) | 0.0 | 92/101(91%) | 0/101(0%) | Plus/Plus |
Query 14 FGLEFVISSSDKSNHVVSKKGIGDSDTLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYKISDGQL 316 +G EFVISSSDKS+ ++SKKGIGDS TLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYKIS+ QL Subject 457 YGSEFVISSSDKSSQIISKKGIGDSSTLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYKISNDQL 759
Range 2: 459 to 746 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
159.1 bits(341) | 0.0 | 85/96(89%) | 0/96(0%) | Minus/Minus |
Query 16 LILY**AQGLRLSGEPTSTSGGITAVAKSILGFATSKKLMRSLIDQ**ISSCRKRFRAPVEITRGTNLRSVSESPIPFXXXXXXXXXXXLITNSKP 303 LILY *AQGLRLSGEPTSTSGGITAVAKSILG ATSKKL++SLIDQ**ISSC+KRF APVEITRGTNLRSV ESP+PFLL WLDLSLELITNS P Subject 459 LILYW*AQGLRLSGEPTSTSGGITAVAKSILGLATSKKLIKSLIDQ**ISSCKKRFLAPVEITRGTNLRSVLESPMPFLLMIWLDLSLELITNSDP 746
Range 3: 460 to 729 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
153.7 bits(329) | 0.0 | 59/90(66%) | 0/90(0%) | Minus/Minus |
Query 17 GPRIEAFRRANQHLWRNYCSCQEHTWLCNIQKINEIAD*PVMNLIMQEKIPSTCGNYARNQSPECVRITNTLLADNMVRLVTRAYHKFQT 286 GPR++A RR NQHLWR++C CQ+HTWL +IQ+I+ IA+*PVMN IMQ+KI STCGN AR+Q EC RITN LAD++ LVTR YHKF++ Subject 460 GPRVKALRRTNQHLWRDHCCCQKHTWLSHIQEID*IAN*PVMNFIMQKKISSTCGNNARDQPSECARITNAFLADDLA*LVTRTYHKFRS 729
Range 4: 467 to 766 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.1 bits(282) | 0.0 | 63/100(63%) | 0/100(0%) | Plus/Plus |
Query 24 NL**ALVTSLTMLSARRVLVILTHSGDWFRA*FPQVLGIFSCMMRFITGQSAISLIFWMLQSQVCSWQLQ*FLQRCWLALLKASILGPINIRSVMASYKS 323 NL** LVTS SAR+ LVIL HS W RA FPQVL IF CMM+FITGQ AI I WM SQVC WQ Q* LQRCWL LL+A LGP + + V S S Subject 467 NL**VLVTSQAKSSARKALVILAHSEGWSRALFPQVLEIFFCMMKFITGQLAI*SISWMWLSQVCFWQQQ*SLQRCWLVLLRALTLGPTSTKLVTISCSS 766
Range 5: 456 to 737 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
130.3 bits(278) | 0.0 | 61/94(65%) | 0/94(0%) | Plus/Plus |
Query 13 VWFGICDKL**QV*PCCQQEGYW*F*HTPEIGSARNFHRCSESFPA**DSLLVNQRSH*FFGCCKAKYALGNCSNSSRGAGWLS*KPQSLGLSI 294 VW ICDK **QV P QQE +W*F*HTP++G AR FHRC +SF A**+SLLVN R + F GC AKYA GN S+ SRGAGW S*+P LGL + Subject 456 VWI*ICDKF**QVKPNHQQERHW*F*HTPKVGPARYFHRC*KSFFA**NSLLVN*RFNQFLGCG*AKYAFGNSSDPSRGAGWFS*EP*PLGLPV 737
Range 6: 455 to 664 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
96.8 bits(205) | 0.0 | 46/70(66%) | 0/70(0%) | Minus/Minus |
Query 12 RAYLALQHPKN**DR*LTSNESHHAGKDSEHLWKLRAEPISGVCQNHQYPSC*QHG*TCH*SLSQIPNQT 221 +AYLA HP+N* +R*LTSNE HHA KD HLWK RA P GVC NHQ SC* G TCH*+LSQI T Subject 455 KAYLA*PHPRN*LNR*LTSNEFHHAKKDF*HLWK*RAGPTFGVC*NHQCLSC**FGLTCH*NLSQIQIHT 664
Nucleotide Sequence (490 letters)
Query ID: | ds2016-133_14 |
Query definition: | No definition line |
Query length: | 603 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
394.7 | 2202.9 | 39% | 4.32e-108 | 97% | AY368590.1 | |
373.6 | 1997.6 | 39% | 9.559e-102 | 85% | AB277783.1 | |
370.8 | 1994.4 | 30% | 6.428e-101 | 85% | KX274275.1 | |
331.0 | 1195.9 | 41% | 6.432e-89 | 45% | KT948710.1 | |
328.2 | 1136.0 | 34% | 4.285e-88 | 47% | KX274274.1 |
Alignments
Rupestris stem pitting associated virus strain Syrah, complete genome
Sequence ID: AY368590.1 Length: 8742 Number of Matches: 8
Range 1: 6859 to 7347 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
394.7 bits(855) | 0.0 | 160/163(98%) | 0/163(0%) | Minus/Plus |
Query 1 DVLFSDPYQNISVPREAHFIKSKTCRFGKNTCKYLLSFGFDVHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*DAFSATCELGQNCYSIDNRLGHWLGAAFPKKVKFA 489 DVLFSDPYQNISVPREAHFIKSKTCRFGKNTCKYLLSFGFDVHSDRSDEVITGSPFELDVEGVLICFGKEAV+LAAAHNSDFKLPCEVRG TFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*DAFSATCELGQNCYSID+RLGHWLGAAFPKKVKFA Subject 6859 DVLFSDPYQNISVPREAHFIKSKTCRFGKNTCKYLLSFGFDVHSDRSDEVITGSPFELDVEGVLICFGKEAVNLAAAHNSDFKLPCEVRGTTFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*DAFSATCELGQNCYSIDDRLGHWLGAAFPKKVKFA 7347
Range 2: 6859 to 7347 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
387.3 bits(839) | 0.0 | 162/163(99%) | 0/163(0%) | Plus/Minus |
Query 1 GKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDDQLLPMSCCSNVEPVLIIRGRIS*FQ*GNNIKCSTSYLTRKFEI*IMRSCQINCLLAKAN*HTLNIQLKW*TCNHFIRPVTMHIKTKG*KVLTCIFAKPAGL*LYEVSLPWNTDILIWVRE*HV 489 GKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDDQLLPMSCCSNVEPVLIIRGRIS*FQ*GNNIKCSTSYLTRKFEI*IMRSCQ+NCLLAKAN*HTLNIQLKW*TCNHFIRPVTMHIKTKG*KVLTCIFAKPAGL*LYEVSLPWNTDILIWVRE*HV Subject 6859 GKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDDQLLPMSCCSNVEPVLIIRGRIS*FQ*GNNIKCSTSYLTRKFEI*IMRSCQVNCLLAKAN*HTLNIQLKW*TCNHFIRPVTMHIKTKG*KVLTCIFAKPAGL*LYEVSLPWNTDILIWVRE*HV 7347
Range 3: 6858 to 7346 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
369.0 bits(799) | 0.0 | 159/163(98%) | 0/163(0%) | Plus/Minus |
Query 2 ANLTFLGNAAPSQCPSLLSME*QFWPNSQVAEKASHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCTSKPKDRRYLHVFLPNLQVFDFMK*ASLGTLIF*YGSENSTS 490 ANLTFLGNAAPSQCPSL SME*QFWPNSQVAEKASHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNV PRTSQGSLKSELCAAAK TASLPKQISTPSTSNSNGEPVITSSDLSLCTSKPKDRRYLHVFLPNLQVFDFMK*ASLGTLIF*YGSEN+TS Subject 6858 ANLTFLGNAAPSQCPSLSSME*QFWPNSQVAEKASHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVVPRTSQGSLKSELCAAAKLTASLPKQISTPSTSNSNGEPVITSSDLSLCTSKPKDRRYLHVFLPNLQVFDFMK*ASLGTLIF*YGSENNTS 7346
Range 4: 6860 to 7345 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
369.0 bits(799) | 0.0 | 157/162(97%) | 0/162(0%) | Plus/Minus |
Query 3 QI*LS*EMQHQANAQAYCQWSNSFGPIRRLLKRHLTA**STSSYVLLQQCRTSAYHQRSDLLISIR*QHQM*HLVPHKEV*NLNYAQLPNQLPPCQSKLAHPQHPTQMVNL*SLHQTCHYAHQNQRIEGTYMYFCQTCRSLTL*SEPPLEH*YFDMGQRIAR 488 QI*LS*EMQHQANAQAY QWSNSFGPIRRLLKRHLTA**STSSYVLLQQCRTSAYHQRSDLLISIR*QHQM*+LVPHKEV*NLNYAQLP+ LPPCQSKLAHPQHPTQMVNL*SLHQTCHYAHQNQRIEGTYMYFCQTCRSLTL*SEPPLEH*YFDMGQRI R Subject 6860 QI*LS*EMQHQANAQAYRQWSNSFGPIRRLLKRHLTA**STSSYVLLQQCRTSAYHQRSDLLISIR*QHQM*YLVPHKEV*NLNYAQLPS*LPPCQSKLAHPQHPTQMVNL*SLHQTCHYAHQNQRIEGTYMYFCQTCRSLTL*SEPPLEH*YFDMGQRITR 7345
Range 5: 7103 to 7345 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
189.4 bits(407) | 0.0 | 81/81(100%) | 0/81(0%) | Minus/Plus |
Query 3 SNFLVRYEVLHLMLLPY*NQEIRPLMISTGSTLLQQDIGRS*SSCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNL 245 SNFLVRYEVLHLMLLPY*NQEIRPLMISTGSTLLQQDIGRS*SSCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNL Subject 7103 SNFLVRYEVLHLMLLPY*NQEIRPLMISTGSTLLQQDIGRS*SSCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNL 7345
Range 6: 6860 to 7054 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
154.1 bits(330) | 0.0 | 65/65(100%) | 0/65(0%) | Minus/Plus |
Query 294 TCYSLTHIKISVFQGRLTS*SQRPAGLAKIHVSTFYPLVLMCIVTGLMK*LQVHHLSWMLRVC*F 488 TCYSLTHIKISVFQGRLTS*SQRPAGLAKIHVSTFYPLVLMCIVTGLMK*LQVHHLSWMLRVC*F Subject 6860 TCYSLTHIKISVFQGRLTS*SQRPAGLAKIHVSTFYPLVLMCIVTGLMK*LQVHHLSWMLRVC*F 7054
Range 7: 6858 to 7277 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
311.7 bits(674) | 0.0 | 137/140(98%) | 0/140(0%) | Minus/Plus |
Query 71 *RAIL*PISKYQCSKGGSLHKVKDLQVWQKYM*VPSILWF*CA**QV**SDYRFTI*VGC*GCANLLWQGGS*FGSCA*FRFQTSL*GTRCYI*CCYLIEIKRSDL***ALVLHCCNKT*EEVDHHAVRCLFSNLRIGPK 490 *R IL*PISKYQCSKGGSLHKVKDLQVWQKYM*VPSILWF*CA**QV**SDYRFTI*VGC*GCANLLWQGGS* GSCA*FRFQTSL*GTR YI*CCYLIEIKRSDL***ALVLHCCNKT*EEVDHHAVRCLFSNLRIGPK Subject 6858 *RVIL*PISKYQCSKGGSLHKVKDLQVWQKYM*VPSILWF*CA**QV**SDYRFTI*VGC*GCANLLWQGGS*LGSCA*FRFQTSL*GTRYYI*CCYLIEIKRSDL***ALVLHCCNKT*EEVDHHAVRCLFSNLRIGPK 7277
Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OB1
Sequence ID: AB277783.1 Length: 2876 Number of Matches: 8
Range 1: 1115 to 1603 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
373.6 bits(809) | 0.0 | 152/163(93%) | 0/163(0%) | Minus/Plus |
Query 1 DVLFSDPYQNISVPREAHFIKSKTCRFGKNTCKYLLSFGFDVHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*DAFSATCELGQNCYSIDNRLGHWLGAAFPKKVKFA 489 DVLFSDPYQNISVPREAHFIKSKTCRFG+NTCKYLLSFGF++HSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*+AFSATCELGQN + ID+ LGHWL A+FPKKVKFA Subject 1115 DVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPIDDWLGHWLSASFPKKVKFA 1603
Range 2: 1114 to 1602 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
345.6 bits(748) | 0.0 | 152/163(93%) | 0/163(0%) | Plus/Minus |
Query 2 ANLTFLGNAAPSQCPSLLSME*QFWPNSQVAEKASHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCTSKPKDRRYLHVFLPNLQVFDFMK*ASLGTLIF*YGSENSTS 490 ANLTFLGN A SQCPS SM * FWPNSQVAEKA HCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLC KPKDRRYLHVF PNLQVFDFMK*ASLGTLIF*YGSEN+TS Subject 1114 ANLTFLGNEALSQCPSQSSMG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLIF*YGSENNTS 1602
Range 3: 1115 to 1603 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
337.9 bits(731) | 0.0 | 147/163(90%) | 0/163(0%) | Plus/Minus |
Query 1 GKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDDQLLPMSCCSNVEPVLIIRGRIS*FQ*GNNIKCSTSYLTRKFEI*IMRSCQINCLLAKAN*HTLNIQLKW*TCNHFIRPVTMHIKTKG*KVLTCIFAKPAGL*LYEVSLPWNTDILIWVRE*HV 489 GKFDFLRK STKPMPKPIVNGV VLAQFAGC*KGISLHDDQ L MSCCSNVEPVLII GRI *FQ*GNNIKCSTSYLTRKFEI IMRS INCLLAKAN HTLNIQLKW CNHFIRPVTM IKTKG KVLTCIFAK AGL*LYEVSLPWNTDILIWVR+*HV Subject 1115 GKFDFLRK*STKPMPKPIVNGVIVLAQFAGC*KGISLHDDQFLSMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSYLTRKFEIGIMRSR*INCLLAKANQHTLNIQLKWRACNHFIRPVTMQIKTKGQKVLTCIFAKSAGL*LYEVSLPWNTDILIWVRK*HV 1603
Range 4: 1116 to 1601 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
314.9 bits(681) | 0.0 | 138/162(85%) | 0/162(0%) | Plus/Minus |
Query 3 QI*LS*EMQHQANAQAYCQWSNSFGPIRRLLKRHLTA**STSSYVLLQQCRTSAYHQRSDLLISIR*QHQM*HLVPHKEV*NLNYAQLPNQLPPCQSKLAHPQHPTQMVNL*SLHQTCHYAHQNQRIEGTYMYFCQTCRSLTL*SEPPLEH*YFDMGQRIAR 488 QI*LS*EM+H ANAQA QW +SFGPIRRLLKRH TA**S S YVLLQQCRTSAYH+RSD LISIR*QHQM*HLVPHKEV*N NYAQ NQLPPCQSK AHPQHPTQM +L*SLHQTCHYA+ NQR EGTYMYF Q CRSLTL*SEPPLEH*YFDMGQ+I R Subject 1116 QI*LS*EMKH*ANAQANRQWGDSFGPIRRLLKRHFTA**SISFYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLVPHKEV*NRNYAQPLNQLPPCQSKSAHPQHPTQMASL*SLHQTCHYAN*NQRTEGTYMYFRQICRSLTL*SEPPLEH*YFDMGQKITR 1601
Range 5: 1359 to 1601 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
177.5 bits(381) | 0.0 | 76/81(94%) | 0/81(0%) | Minus/Plus |
Query 3 SNFLVRYEVLHLMLLPY*NQEIRPLMISTGSTLLQQDIGRS*SSCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNL 245 SNFLVRYEVLHLMLLPY*NQ IRP MISTGSTLLQQDI R+*SSCSEMPFQQPANWAKT+TPLTIGLGIGLVLHFLRKSNL Subject 1359 SNFLVRYEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIERN*SSCSEMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNL 1601
Range 6: 1116 to 1310 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
136.7 bits(292) | 0.0 | 59/65(91%) | 0/65(0%) | Minus/Plus |
Query 294 TCYSLTHIKISVFQGRLTS*SQRPAGLAKIHVSTFYPLVLMCIVTGLMK*LQVHHLSWMLRVC*F 488 TCY LTHIKISVFQGRLTS*SQRPA LAKIHVSTF PLVL+CIVTGLMK*LQ HLSWMLRVC*F Subject 1116 TCYFLTHIKISVFQGRLTS*SQRPADLAKIHVSTFCPLVLICIVTGLMK*LQARHLSWMLRVC*F 1310
Range 7: 1114 to 1533 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
288.8 bits(624) | 0.0 | 124/140(89%) | 0/140(0%) | Minus/Plus |
Query 71 *RAIL*PISKYQCSKGGSLHKVKDLQVWQKYM*VPSILWF*CA**QV**SDYRFTI*VGC*GCANLLWQGGS*FGSCA*FRFQTSL*GTRCYI*CCYLIEIKRSDL***ALVLHCCNKT*EEVDHHAVRCLFSNLRIGPK 490 *R I *PISKYQCSKGGSLHKVKDLQ+W+KYM*VPS+LWF* A**QV**SDYR I*VGC*GCA+LLWQGGS*F CA*FRFQTSL*GTRCYI*CCYLIEIK SDL **ALVLHCCNKT*+E+DHHAV+CLFSNLRIGPK Subject 1114 *RVIF*PISKYQCSKGGSLHKVKDLQIWRKYM*VPSVLWF*FA**QV**SDYRLAI*VGC*GCADLLWQGGS*FSGCA*FRFQTSL*GTRCYI*CCYLIEIKGSDLR**ALVLHCCNKT*KEIDHHAVKCLFSNLRIGPK 1533
Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome
Sequence ID: KX274275.1 Length: 8724 Number of Matches: 8
Range 1: 6859 to 7347 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
370.8 bits(803) | 0.0 | 151/163(93%) | 0/163(0%) | Minus/Plus |
Query 1 DVLFSDPYQNISVPREAHFIKSKTCRFGKNTCKYLLSFGFDVHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*DAFSATCELGQNCYSIDNRLGHWLGAAFPKKVKFA 489 DVLFSDPYQNISVPREAHFIKSKTCRFG+NTCKYLLSFGF++HSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*+AFSATCELGQN + +D+ GHWLGAAF KKVKFA Subject 6859 DVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPVDDWRGHWLGAAFSKKVKFA 7347
Range 2: 6858 to 7346 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
343.8 bits(744) | 0.0 | 151/163(93%) | 0/163(0%) | Plus/Minus |
Query 2 ANLTFLGNAAPSQCPSLLSME*QFWPNSQVAEKASHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCTSKPKDRRYLHVFLPNLQVFDFMK*ASLGTLIF*YGSENSTS 490 ANLTFL NAAPSQCP S * FWPNSQVAEKA HCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLC KPKDRRYLHVF PNLQVFDFMK*ASLGTLIF*YGSEN+TS Subject 6858 ANLTFLENAAPSQCPRQSSTG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLIF*YGSENNTS 7346
Range 3: 6859 to 7347 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
343.3 bits(743) | 0.0 | 148/163(91%) | 0/163(0%) | Plus/Minus |
Query 1 GKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDDQLLPMSCCSNVEPVLIIRGRIS*FQ*GNNIKCSTSYLTRKFEI*IMRSCQINCLLAKAN*HTLNIQLKW*TCNHFIRPVTMHIKTKG*KVLTCIFAKPAGL*LYEVSLPWNTDILIWVRE*HV 489 GKFDFLRKCSTKPMP PIVNGV VLAQFAGC*KGISLHDDQ L MSCCSNVEPVLII GRI *FQ*GNNIKCSTS+LTRKFEI IMRS INCLLAKAN*HTLNIQLKW TCNHFIRPVTM IKTKG KVLTCIFAK AGL*LYEVSLPWNTDILIWVR+*HV Subject 6859 GKFDFLRKCSTKPMPTPIVNGVIVLAQFAGC*KGISLHDDQFLSMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSHLTRKFEIRIMRSR*INCLLAKAN*HTLNIQLKWRTCNHFIRPVTMQIKTKGQKVLTCIFAKSAGL*LYEVSLPWNTDILIWVRK*HV 7347
Range 4: 6860 to 7345 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
313.6 bits(678) | 0.0 | 138/162(85%) | 0/162(0%) | Plus/Minus |
Query 3 QI*LS*EMQHQANAQAYCQWSNSFGPIRRLLKRHLTA**STSSYVLLQQCRTSAYHQRSDLLISIR*QHQM*HLVPHKEV*NLNYAQLPNQLPPCQSKLAHPQHPTQMVNL*SLHQTCHYAHQNQRIEGTYMYFCQTCRSLTL*SEPPLEH*YFDMGQRIAR 488 QI*LS*+MQHQANA A Q +SFGPIRRLLKRH TA**S S YVLLQQCRTSAYH+RSD LISIR*QHQM*HL PHKEV*N NYAQ NQLPPCQSKLAHPQHPTQM NL*SLHQTCHYA+ NQR EGTYMYF Q CRSLTL*SEPPLEH*YFDMGQ+I R Subject 6860 QI*LS*KMQHQANAHANRQRGDSFGPIRRLLKRHFTA**SISFYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLAPHKEV*NQNYAQPLNQLPPCQSKLAHPQHPTQMANL*SLHQTCHYAN*NQRTEGTYMYFRQICRSLTL*SEPPLEH*YFDMGQKITR 7345
Range 5: 6858 to 7277 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
287.4 bits(621) | 0.0 | 124/140(89%) | 0/140(0%) | Minus/Plus |
Query 71 *RAIL*PISKYQCSKGGSLHKVKDLQVWQKYM*VPSILWF*CA**QV**SDYRFTI*VGC*GCANLLWQGGS*FGSCA*FRFQTSL*GTRCYI*CCYLIEIKRSDL***ALVLHCCNKT*EEVDHHAVRCLFSNLRIGPK 490 *R I *PISKYQCSKGGSLHKVKDLQ+W+KYM*VPS+LWF* A**QV**SDYRF I*VGC*GCANLLWQGGS*F CA*F FQTSL*G RCYI*CCYLIEIK SDL **ALVLHCCNKT*+E+DHHAV+CLFSNLRIGPK Subject 6858 *RVIF*PISKYQCSKGGSLHKVKDLQIWRKYM*VPSVLWF*FA**QV**SDYRFAI*VGC*GCANLLWQGGS*FSGCA*F*FQTSL*GARCYI*CCYLIEIKGSDLR**ALVLHCCNKT*KEIDHHAVKCLFSNLRIGPK 7277
Range 6: 7317 to 7346 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
24.9 bits(48) | 0.0 | 9/10(90%) | 0/10(0%) | Minus/Plus |
Query 2 CCIS*ESQIC 31 CCI *ESQIC Subject 7317 CCIF*ESQIC 7346
Range 7: 7103 to 7345 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
172.0 bits(369) | 0.0 | 74/81(91%) | 0/81(0%) | Minus/Plus |
Query 3 SNFLVRYEVLHLMLLPY*NQEIRPLMISTGSTLLQQDIGRS*SSCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNL 245 SNFLVR EVLHLMLLPY*NQ IRP MISTGSTLLQQDI R+*SSCSEMPFQQPANWAKT+TPLTIG+GIGLVLHFLRKSNL Subject 7103 SNFLVRCEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIERN*SSCSEMPFQQPANWAKTITPLTIGVGIGLVLHFLRKSNL 7345
Range 8: 6860 to 7054 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
138.5 bits(296) | 0.0 | 60/65(92%) | 0/65(0%) | Minus/Plus |
Query 294 TCYSLTHIKISVFQGRLTS*SQRPAGLAKIHVSTFYPLVLMCIVTGLMK*LQVHHLSWMLRVC*F 488 TCY LTHIKISVFQGRLTS*SQRPA LAKIHVSTF PLVL+CIVTGLMK*LQV HLSWMLRVC*F Subject 6860 TCYFLTHIKISVFQGRLTS*SQRPADLAKIHVSTFCPLVLICIVTGLMK*LQVRHLSWMLRVC*F 7054
Grapevine rupestris stem pitting associated virus isolate VF1, partial genome
Sequence ID: KT948710.1 Length: 8716 Number of Matches: 9
Range 1: 6860 to 7348 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
331.0 bits(716) | 0.0 | 134/163(82%) | 0/163(0%) | Minus/Plus |
Query 1 DVLFSDPYQNISVPREAHFIKSKTCRFGKNTCKYLLSFGFDVHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*DAFSATCELGQNCYSIDNRLGHWLGAAFPKKVKFA 489 DVLFSDPYQNISVPREAHFIK+KTCRFG NTCKYL SFGFDVHSDR D V+ GSPFELDVEGVLICFGKEAVDLA AHNSDFKLPCEVRG+TF+VVTLLKSRDPTS+DKHWFY+AATRHR KLIIMQ*DAF ATC+LG + SI++ GHW+G+ +KVKFA Subject 6860 DVLFSDPYQNISVPREAHFIKTKTCRFGANTCKYLQSFGFDVHSDRVDAVVIGSPFELDVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFNVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*DAFPATCQLG*DHNSINHWPGHWIGSTLLEKVKFA 7348
Range 2: 6859 to 7347 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
245.8 bits(530) | 0.0 | 113/163(69%) | 0/163(0%) | Plus/Minus |
Query 2 ANLTFLGNAAPSQCPSLLSME*QFWPNSQVAEKASHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCTSKPKDRRYLHVFLPNLQVFDFMK*ASLGTLIF*YGSENSTS 490 ANLTF + P QCP ME P+ QVA KASHC++I+ CLVAA *NQCLSSEVGSLDFN VTT NV PRTSQG+LKSELCA A+STAS PKQ+ TPSTS+SNG+P+ T+S LSL TSKPKD RYL V PNLQV FMK ASLGTL+F GSENSTS Subject 6859 ANLTFSRSVEPIQCPGQWLMELWS*PSWQVAGKASHCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTLNVEPRTSQGNLKSELCATARSTASFPKQMRTPSTSSSNGDPITTASTLSL*TSKPKDWRYLQVLAPNLQVLVFMKCASLGTLMFW*GSENSTS 7347
Range 3: 6860 to 7348 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
195.3 bits(420) | 0.0 | 85/163(52%) | 0/163(0%) | Plus/Minus |
Query 1 GKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDDQLLPMSCCSNVEPVLIIRGRIS*FQ*GNNIKCSTSYLTRKFEI*IMRSCQINCLLAKAN*HTLNIQLKW*TCNHFIRPVTMHIKTKG*KVLTCIFAKPAGL*LYEVSLPWNTDILIWVRE*HV 489 GKFDFL+KC T PMP+P+VNGV VLAQ AGC KGISLH M CC NVEP+L+ + Q* NN+KC T +L + E+ I+R+C I LL+KAN ++LNIQ KW N+ + +TM+I+ K +VL + KPA LYEV LPWN D+L+ V E H+ Subject 6860 GKFDFLKKCRTNPMPRPMVNGVMVLAQLAGCWKGISLHYY*FASMPCCCNVEPMLVF*SWVPRLQ*RNNVKC*TPHLAGQLEVRIVRNC*IYSLLSKANENSLNIQFKWRPYNNCVHSITMNIEAKRLEVLAGVSTKPASFGLYEVCLPWNADVLVGV*EQHI 7348
Range 4: 7119 to 7346 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.0 bits(238) | 0.0 | 53/76(70%) | 0/76(0%) | Minus/Plus |
Query 3 RYEVLHLMLLPY*NQEIRPLMISTGSTLLQQDIGRS*SSCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNL 230 R V HL LL Y*+ + S GSTL QQ I +* CSEMPFQQPANWAKT+TPLTIGLGIGLVLHFLRKSNL Subject 7119 RCGVQHLTLLRY*SLGTQLQKTSIGSTLQQQGIEAN***CSEMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNL 7346
Range 5: 6864 to 7043 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
45.1 bits(92) | 0.0 | 27/60(45%) | 0/60(0%) | Minus/Plus |
Query 306 CYSLTHIKISVFQGRLTS*SQRPAGLAKIHVSTFYPLVLMCIVTGLMK*LQVHHLSWMLR 485 C S T + S FQGR TS* + AGL ST L M IV + L HL+WMLR Subject 6864 CCSQTPTRTSAFQGRHTS*RPKLAGLVLTPASTSNLLASMFIVIEWTQLL*GRHLNWMLR 7043
Range 6: 6865 to 7161 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
99.6 bits(211) | 0.0 | 49/99(49%) | 0/99(0%) | Minus/Plus |
Query 188 AIL*PISKYQCSKGGSLHKVKDLQVWQKYM*VPSILWF*CA**QV**SDYRFTI*VGC*GCANLLWQGGS*FGSCA*FRFQTSL*GTRCYI*CCYLIEI 484 A+L P+ ++Q SKGG+LHK ++LQVW ++ VP I W C+** S YR I* GC*G ++LLW+GG SCA F Q +L G I* CY+IE+ Subject 6865 AVLRPLPEHQRSKGGTLHKDQNLQVWC*HLQVPPIFWLRCS***SGRSCYRVAI*TGC*GSSHLLWKGGCRSSSCAQF*LQVALRGAGFNI*RCYVIEV 7161
Range 7: 7186 to 7272 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
38.6 bits(78) | 0.0 | 16/29(55%) | 0/29(0%) | Minus/Plus |
Query 77 ALVLHCCNKT*EEVDHHAVRCLFSNLRIG 163 ALVL C NK ++ +++AVRCL SNL G Subject 7186 ALVLRCSNKASKQTNNNAVRCLSSNLPTG 7272
Range 8: 6864 to 7157 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
82.6 bits(174) | 0.0 | 46/98(47%) | 0/98(0%) | Plus/Minus |
Query 192 SIR*QHQM*HLVPHKEV*NLNYAQLPNQLPPCQSKLAHPQHPTQMVNL*SLHQTCHYAHQNQRIEGTYMYFCQTCRSLTL*SEPPLEH*YFDMGQRIA 485 SI *Q M + P + *+ N AQL + PP QSK PQHP QM L* L HY H++Q+I GT QTC+ +L*S PPLE * G R A Subject 6864 SIT*QR*MLNPAPRRAT*SQNCAQLLDLQPPFQSK*ELPQHPVQMATL*QLRPLYHYEHRSQKIGGTCRC*HQTCKFWSL*SVPPLER*CSGRGLRTA 7157
Grapevine rupestris stem pitting associated virus isolate SK704 A, complete genome
Sequence ID: KX274274.1 Length: 8725 Number of Matches: 7
Range 1: 6859 to 7347 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
328.2 bits(710) | 0.0 | 131/163(80%) | 0/163(0%) | Minus/Plus |
Query 1 DVLFSDPYQNISVPREAHFIKSKTCRFGKNTCKYLLSFGFDVHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*DAFSATCELGQNCYSIDNRLGHWLGAAFPKKVKFA 489 DVLFSDPYQNISVPREAHFIK+KTCRFG NTC+YL SFGF+++SDR D V+ GSPFELDVEGVLICFGKEAVDLA AHNSDFKLPCEVRG+TF+VVTLLKSRDPTS+DKHWFY+AATRHR KLIIMQ*DAF ATC+LG + SI++ LGHW+G+ +KVKFA Subject 6859 DVLFSDPYQNISVPREAHFIKTKTCRFGANTCRYLQSFGFEIYSDRVDAVVIGSPFELDVEGVLICFGKEAVDLAVAHNSDFKLPCEVRGSTFNVVTLLKSRDPTSEDKHWFYVAATRHRSKLIIMQ*DAFPATCQLG*DYNSINHWLGHWIGSTLLEKVKFA 7347
Range 2: 6858 to 7346 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
241.2 bits(520) | 0.0 | 112/163(69%) | 0/163(0%) | Plus/Minus |
Query 2 ANLTFLGNAAPSQCPSLLSME*QFWPNSQVAEKASHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCTSKPKDRRYLHVFLPNLQVFDFMK*ASLGTLIF*YGSENSTS 490 ANLTF + P QCPS ME P+ QVA KAS+C++I+ CLVAA *NQCLSSEVGSLDFN VTT NV PRTSQG+LKSELCA A+STAS PKQ+ TPSTS+SNG+P+ T+S LSL SKPKD RYL V PNLQV FMK ASLGTL+F GSENSTS Subject 6858 ANLTFSRSVEPIQCPSQWLMEL*S*PSWQVAGKASYCIIISLLRCLVAAT*NQCLSSEVGSLDFNNVTTLNVEPRTSQGNLKSELCATARSTASFPKQMRTPSTSSSNGDPITTASTLSL*ISKPKDWRYLQVLAPNLQVLVFMKCASLGTLMFW*GSENSTS 7346
Range 3: 6859 to 7347 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
189.4 bits(407) | 0.0 | 84/163(52%) | 0/163(0%) | Plus/Minus |
Query 1 GKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDDQLLPMSCCSNVEPVLIIRGRIS*FQ*GNNIKCSTSYLTRKFEI*IMRSCQINCLLAKAN*HTLNIQLKW*TCNHFIRPVTMHIKTKG*KVLTCIFAKPAGL*LYEVSLPWNTDILIWVRE*HV 489 GKFDFL+KC T PMPKP+VNGV VLAQ AGC KGI LH Q M CC NVEP+LI + Q* +N+KC T +LT + E+ I+R+C I LL+KAN ++LNIQ KW N+ + +T+ + K +V + KPA LYEV LPWN D+L+ V E H+ Subject 6859 GKFDFLKKCRTNPMPKPMVNGVIVLAQLAGCWKGILLHYYQFASMPCCCNVEPMLIF*SWVPRLQ*RHNVKC*TPHLTGQLEVGIVRNC*IYGLLSKANENSLNIQFKWRPYNNCVHSITIDFEAKRLEVPAGVSTKPASFGLYEVCLPWNADVLVRV*EQHI 7347
Range 4: 7115 to 7345 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
110.6 bits(235) | 0.0 | 53/77(69%) | 0/77(0%) | Minus/Plus |
Query 3 VRYEVLHLMLLPY*NQEIRPLMISTGSTLLQQDIGRS*SSCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNL 233 VR V HL L Y*+ + IS GSTL QQ I +* CS+MPFQQPANWAKT+TPLTIGLGIGLVLHFLRKSNL Subject 7115 VRCGVQHLTL*RY*SLGTQLQKISIGSTLQQQGIEAN***CSKMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNL 7345
Range 5: 6864 to 6974 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.7 bits(100) | 0.0 | 19/37(51%) | 0/37(0%) | Minus/Plus |
Query 374 AIL*PISKYQCSKGGSLHKVKDLQVWQKYM*VPSILW 484 A+L P+ ++Q SKGG+LHK ++LQVW ++ VP I W Subject 6864 AVLRPLPEHQRSKGGTLHKDQNLQVWC*HLQVPPIFW 6974
Range 6: 6863 to 7345 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
127.5 bits(272) | 0.0 | 76/161(47%) | 0/161(0%) | Plus/Minus |
Query 3 QI*LS*EMQHQANAQAYCQWSNSFGPIRRLLKRHLTA**STSSYVLLQQCRTSAYHQRSDLLISIR*QHQM*HLVPHKEV*NLNYAQLPNQLPPCQSKLAHPQHPTQMVNL*SLHQTCHYAHQNQRIEGTYMYFCQTCRSLTL*SEPPLEH*YFDMGQRIA 485 QI*LS E+ +Q+NAQA WS S P+ RLL+RHLTA S LL Q RT+AY + SI Q M + PH+ *+ N AQL + PP QSK PQHP QM L* L HY ++Q+I GT QTC+ +L*S PPLE * G R A Subject 6863 QI*LSQEV*NQSNAQANG*WSYSLSPVGRLLERHLTALLSVCFDALLLQRRTNAYLLKLGP*TSITSQR*MLNPAPHRAT*SRNCAQLLDLRPPFQSK*ELPQHPVQMATL*QLRPLYHYRFRSQKIGGTCRC*HQTCKFWSL*SVPPLER*CSGKGLRTA 7345
Range 7: 7005 to 7271 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.4 bits(191) | 0.0 | 46/89(52%) | 0/89(0%) | Minus/Plus |
Query 77 SDYRFTI*VGC*GCANLLWQGGS*FGSCA*FRFQTSL*GTRCYI*CCYLIEIKRSDL***ALVLHCCNKT*EEVDHHAVRCLFSNLRIG 343 S YR I* GC*G ++LLW+GG SCA FR Q +L*G I* C +IE+ + *ALVL C NK ++ D++AVRCL SNL G Subject 7005 SCYRVAI*TGC*GSSHLLWKGGRRSSSCAQFRLQVAL*GAGFNI*RCDVIEV*GPNFRR*ALVLRCSNKASKQTDNNAVRCLSSNLPTG 7271
Nucleotide Sequence (2651 letters)
Query ID: | ds2016-133_14 |
Query definition: | No definition line |
Query length: | 603 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
1755.5 | 10476.6 | 30% | 0 | 44% | KX274274.1 | |
1746.4 | 9519.9 | 38% | 0 | 41% | KX958435.1 | |
1745.0 | 9427.6 | 38% | 0 | 37% | KT948710.1 | |
1712.0 | 8598.4 | 45% | 0 | 44% | KR054734.1 | |
1657.5 | 7442.5 | 24% | 0 | 42% | AY368172.2 |
Alignments
Grapevine rupestris stem pitting associated virus isolate SK704 A, complete genome
Sequence ID: KX274274.1 Length: 8725 Number of Matches: 16
Range 1: 2926 to 5136 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1755.5 bits(3825) | 0.0 | 730/737(99%) | 0/737(0%) | Plus/Plus |
Query 3 QCDRVVFATTGAGLSKLLDVPRSKKQSILVLEGALAMDTSYGPKILGSFEVFKGDFNIKKIEDGSIFVISYRAPVRSPGKLRVHRTECSFSGSREVLLGCQIEASADYDIDDFNKFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESIADPALSTQTVLKQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMSALFDITNEHIRHVEKIGNGPQSIKVDELREVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGVSVEGFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQ 2213 QCDRVVFATTGAGLSKLLDVPRSKKQSILVLEGALAMDT YGPKILGSFEVFKGDFNIKKIEDGSIFVISYRAPVRSPGKLRVHRTECSFSGSREVLLGCQIEASADYDIDDFNKFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESIADPALSTQTVLKQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMSALFDITNEHIRHVEKIGNGPQSIKVDELR+VKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAF DYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGVSVEGFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGF+++IG+NEGVREEKLCGDPWLKVMLFLGQ Subject 2926 QCDRVVFATTGAGLSKLLDVPRSKKQSILVLEGALAMDTGYGPKILGSFEVFKGDFNIKKIEDGSIFVISYRAPVRSPGKLRVHRTECSFSGSREVLLGCQIEASADYDIDDFNKFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESIADPALSTQTVLKQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFTDYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGVSVEGFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFSINIGKNEGVREEKLCGDPWLKVMLFLGQ 5136
Range 2: 2926 to 5127 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1590.6 bits(3465) | 0.0 | 690/734(94%) | 0/734(0%) | Minus/Minus |
Query 3 EKHDL*PRITTKLFLSHSFISPNANVEAIKEVGLTGKQVPYHILPTLRRQEVVKWFPSKM*EETLHAYTSNVYQVQIVTKA**GR*PPTIISME*VM*N*NPTMFEVQPR*FTKC*C*LLHTKVRLHNFLFLKA*NQNGI*GGLRPSQKEVMHIVKNGIVSERCSHGALLKMTWQPRLKHWIHKPPALNIIPVGLALK*SQYVTLLSP*YRAVLLGVICALTGVTSK*NESVTSYGQ*TKVNVARRKKLNLIKNHTMACL*IFNLSEKYFKGHNVPTFSL*FACLCHFATIIHFQVFFN*IS*SPPG*NKGHELTFRPLHEALVQKAFACSKSSKHNCQFPRFDI*S*YP*EPWLGIIKFLITYNTS*AS*QTSLQLFSPLKAWKVSYLRSIH*KEVKSRSFHFSQLIHLYALRAIANLLNMSYMFIGYVK*S*HASARINNLDFSINVTLGTNVECFEGLSEVHHVQATTLAQFFKDVICGRSAQIVKDIHLTSAERRGNSGYHAAIQWGTGLKMI*LQAQNST*RPLTISKFPTYLILWGDDDQPHMMPNAE*GYHLVLCISIVTKLLQNSLG*QSWICNGFTFNK*TYASFQSKPVCAQQETH*VPKAVTITRHRKFVKVINVIISRGLNLTTK*YFSRP*KGTFRPVDSQFARRSHRSPVRYYKYGAIFNFLNVEVPFEYLKRSQNLWSIAGIHCKCTFKD*Y*LLLAPRHI*QLR*ACTSCCKDNSVTL 2204 EKH+ *PRITT+LFLS++FI + + E I++V LT KQ+PYHILPTL R EVVKWFPSKM*EETLHAYTSNVYQVQIVTKA**GR*PPTIISME*VM*N*N TMFEVQPR*FTKC*C LLHTKVRLHNFLFLKA NQNGI*GGLRPSQKEVMHIVKNGIVSERCSHGALLKMTWQ LKHWIHKPPALNI+PVGLALK*SQYVTLLSP*YRAVLLGVICALTGVTSK*NESVTSYG *TKVNVARRKKL+LIKNHTMACL*IFNLSEKYFKGHNVPTFSL*FACLCHFATIIHFQV FN*IS*SPPG*NKG+ELTFRPLH+A VQKAFACSKSSKH+CQFPRFDI*S*YP*EPWLGIIKFLITYNTS*AS*QTSLQLFSPLKAWKVSYLRSIH*KEVKSRSFHFSQ IHLYALRAIANLLN+SYMFIGYVK*S*HASARINNL+FSIN+TLGTNVECFEGLSEVHHVQATTLAQFFKD+ICGRSAQIVKDIHLTSAERRGNSGYHAAIQWGTGLKMI*LQAQNST*RPLTISKFPT+LILWGD+DQPHMMPNAE*GYHLVLCISIV KLLQN LG*QSWICNGFTFNK*TYASFQSKPVCAQQETH*VPKAVTITRHRKFVKVINVIISRGLNLTT+*YFSRP*KGTFRPVDSQFARRSHRSPVRYYKYGAIFNFLNVEVPFEYLKRSQNL SIAGIHCKCTFKD*Y*LLLAPRHI*QLR*ACTS CKDNSVTL Subject 2926 EKHNF*PRITTQLFLSYTFILTDVDAETIEKVWLTWKQIPYHILPTLCR*EVVKWFPSKM*EETLHAYTSNVYQVQIVTKA**GR*PPTIISME*VM*N*NSTMFEVQPR*FTKC*CKLLHTKVRLHNFLFLKARNQNGI*GGLRPSQKEVMHIVKNGIVSERCSHGALLKMTWQSGLKHWIHKPPALNIVPVGLALK*SQYVTLLSP*YRAVLLGVICALTGVTSK*NESVTSYG**TKVNVARRKKLDLIKNHTMACL*IFNLSEKYFKGHNVPTFSL*FACLCHFATIIHFQVLFN*IS*SPPG*NKGYELTFRPLHKAFVQKAFACSKSSKHDCQFPRFDI*S*YP*EPWLGIIKFLITYNTS*AS*QTSLQLFSPLKAWKVSYLRSIH*KEVKSRSFHFSQFIHLYALRAIANLLNVSYMFIGYVK*S*HASARINNLNFSINITLGTNVECFEGLSEVHHVQATTLAQFFKDMICGRSAQIVKDIHLTSAERRGNSGYHAAIQWGTGLKMI*LQAQNST*RPLTISKFPTHLILWGDNDQPHMMPNAE*GYHLVLCISIVAKLLQNCLG*QSWICNGFTFNK*TYASFQSKPVCAQQETH*VPKAVTITRHRKFVKVINVIISRGLNLTTE*YFSRP*KGTFRPVDSQFARRSHRSPVRYYKYGAIFNFLNVEVPFEYLKRSQNLRSIAGIHCKCTFKD*Y*LLLAPRHI*QLR*ACTSGCKDNSVTL 5127
Range 3: 3309 to 5126 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1327.1 bits(2890) | 0.0 | 563/606(93%) | 0/606(0%) | Plus/Plus |
Query 386 SGFLVEHRRACFESWHTFIC*K*IHCRSSSVNPNCFEATW*QCLCRERDDSLILH*ASCEADHHHPRV*GKLEIWR**VAFMWNFVLAIKSFSTLCPIEWLHDNRYCLCARQT*GGCP*LSVQTFHKSHL*RIVPRWWPEHDVPR*GLRSIRHLCQV*H*WRNRGY*S*RTHVSFI*HNQ*TYKTC*EDWQWPAEHKGG*AERSETICS*PPFNEWIEDNLLSKL*EG*KAAGMFARRLNWCYK**EI**FQAMALRDINFKYQISGIDSCAWNFWSRQKLSVQELHEEV*R*VRDLCFTQEGSS*FN*KRPGNG*WLQSGKGRQIKERRLGRCDL*SISQKD*KSKGRPLCDF**GSAFSSWLR*PLSIDHKK*RFHFTCW*PLSKHI*LPKGPRDTRG*AK*HIEIT*GQVLQV*Y*EPEVCESNV*V*AAMSF*EGLHDCSVR*LCHFSQYA*LPSGSV*DLLRCHSGFKL*GKENCAVLLWYEATNTNIW*INGAELQTWWDFNFT*LIPY**S*VVNGPITL*SQFGLGKHYWCKRGGFPLTFCWETTLPLPDGEEWGECDKGLASR*AQLL*WLQR*HWAK*RSARGKALW*SLAKGHAF 2203 SGFLVEHRRACFESWHTFIC*K*IHCRSSSVNPN FEATW QCLCRERDDSLILH*ASCEADH+HPRV*G+LEIWR**VAFMWNFVLAIKSFSTLCPIEWLHDNRYCLCARQT*GGCP*LSVQTFHKS+L*RIVPRWWPEHDVPR*GLRSIRHLCQV*+*WRN GY*S*RTHVSFI*HNQ*TYKT *EDWQWPAEHKGG* E+SETICS*PPFNEWIEDNLLSKL*EG*KAAGMFARRLNWCYK**EI**FQAMALRDINFKYQISGIDS AWNFWSRQKLSVQ+L+EEV*R*VR+LCFTQEGSS*FN*K PGNG*WLQSGKGRQIKERRLGRCDL*SISQKD*KSKGRPLCDF**G AFSSWLR*PLSI+H K*RFHFTCW*PLSKHI*LPKGPRDTRG*AK*HIEIT*GQVLQV Y*EPEVCESNV*V AMSF*EGLHDCSV *LCHFSQYA*LPSGSV*DLLRCHSGF+L*GKENCAVLLWYEAT TNIW*INGAELQTWW+FNFT*LIPY**S*VVNGPITL*SQFGLGKHYWCKRGGFPLTFCWETTLPLP+G+EWGECDKG ASR*A+L W Q H +*R RGKA+W*S+AK +AF Subject 3309 SGFLVEHRRACFESWHTFIC*K*IHCRSSSVNPNSFEATWRQCLCRERDDSLILH*ASCEADHYHPRV*GELEIWR**VAFMWNFVLAIKSFSTLCPIEWLHDNRYCLCARQT*GGCP*LSVQTFHKSYL*RIVPRWWPEHDVPR*GLRSIRHLCQV*Y*WRN*GY*S*RTHVSFI*HNQ*TYKTR*EDWQWPAEHKGG*TEKSETICS*PPFNEWIEDNLLSKL*EG*KAAGMFARRLNWCYK**EI**FQAMALRDINFKYQISGIDSRAWNFWSRQKLSVQKLYEEV*R*VRNLCFTQEGSS*FN*KGPGNG*WLQSGKGRQIKERRLGRCDL*SISQKD*KSKGRPLCDF**GPAFSSWLR*PLSINHTK*RFHFTCW*PLSKHI*LPKGPRDTRG*AK*HIEIT*GQVLQVQY*EPEVCESNV*VQTAMSF*EGLHDCSVH*LCHFSQYA*LPSGSV*DLLRCHSGFEL*GKENCAVLLWYEATYTNIW*INGAELQTWWNFNFT*LIPY**S*VVNGPITL*SQFGLGKHYWCKRGGFPLTFCWETTLPLPNGKEWGECDKGSASR*AKLFQWFQHQHR*E*RCTRGKAVW*SVAKSYAF 5126
Range 4: 2928 to 4367 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1067.8 bits(2324) | 0.0 | 474/480(99%) | 0/480(0%) | Minus/Minus |
Query 5 ITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRSFLIELARALLGETKVTNLPSDLFMKLLYRKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTSLSSSTFMLCGPLPIFSTCLICSLVMSNKADMRPLGLITSISPLMSHLAQMSNASKASARYIMFRPPPWHNSSKM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHKGHSLSPNFQLTSYSGVMMISLT*CLMQNKAIISFSA*ALSPSCFKTVWVDRAGSAMDSLSTNERMPAFKASPSVLNKKPTECQKQLPSPGTENLLKXXXXXXXXXSI*QPSSTSLDPEKEHSVLWTLNLPGDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKIFGP*LVSIASAPSRTSIDCFLLLGTSSNLDKPAPVVAKTTRSH 1444 ITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRSFLIELARALLGETKVTNLPSDLF+KLLYRKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFT LSSSTFMLCGPLPIFSTCLICSLVMSNKADMRPLGLITSISPL+SHLAQMSNASKASARYIMFRPPPWHNSSK+*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHKGHSLSPNFQLTSYSGV+MISLT*CLMQNKAIISFSA*ALSPSCFKTVWVDRAGSAMDSLSTNERMPAFKASPSVLNKKPTECQKQLPSPGTENLLKSSMS*SAEASI*QPSSTSLDPEKEHSVLWTLNLPGDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKIFGP* VSIASAPSRTSIDCFLLLGTSSNLDKPAPVVAKTTRSH Subject 2928 ITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRSFLIELARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTFLSSSTFMLCGPLPIFSTCLICSLVMSNKADMRPLGLITSISPLISHLAQMSNASKASARYIMFRPPPWHNSSKI*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHKGHSLSPNFQLTSYSGVIMISLT*CLMQNKAIISFSA*ALSPSCFKTVWVDRAGSAMDSLSTNERMPAFKASPSVLNKKPTECQKQLPSPGTENLLKSSMS*SAEASI*QPSSTSLDPEKEHSVLWTLNLPGDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKIFGP*PVSIASAPSRTSIDCFLLLGTSSNLDKPAPVVAKTTRSH 4367
Range 5: 3902 to 5545 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
950.9 bits(2069) | 0.0 | 441/548(80%) | 0/548(0%) | Plus/Plus |
Query 979 WMS*EK*NDLLLTSFQ*MDRR*LTFQALRGLKSCRDVC*EA*LVL*VMRNLMIPSHGSQGYQLQISNLGN*QLCLELLEQAKAFCTRAS*RGLKVSS*PLFHPGGL*LIQLKKTWKWMMVAKWQRQANQREKVGTL*PLKYFSERLKI*RQAIV*FLMRFSFFLLATLTFVY*P*EVTLSFHLLVTPVKAHMTPKRTARY*GLSKVTY*DYLRASPTGIILRAGGL*IQCLSLGCHVILRRAP*LQRSLTMPFFTICMTSFWLGLRPP*MPFWFQALRKRKLCSLTLV*SN*H*HLVNQRG*TSNMVGF*FHMTHSILMIVGG*RPYHALVTIWTW*TLLV*AWRVSSHILLGNHFTTS*RRRVGRM**GTCFPVSPTSLMASTLALGEMKECERKSFVVILG*RSCFS*AKMRIARLRKLSLNARMRNGLKPISH*VIWNQQGPGGLERWH*RNTVK*DVVMKRLNSSLMNIGVEEASN*ATRVKDLKAYIQGIKVTIR*PSSWLSGNV*SFLSLKLKLQN*GAQSHTGSSY*TLSFLRFH*MQATM 2622 WM+*EK*NDLLLTSFQ*MDRR*LTFQALRGLKSCRDVC*EA*LVL*VMRNLMIPSHGSQGYQLQISNLGN*Q CLELLEQAKAFCT+A *RGLKVSS*PLFHPGGL*LIQLK+TWKWMMVAKWQRQANQREKVGTL*PLKYFSERLKI*RQAIV*FLMR SFFLLATLTFVY*P EVTLSFHLLVTPVKAHMTPKRTARY*GLSKVTY*DYLRASPTG ILRAGGL*IQCLS CHVILRRAP*LQRSLTMPFFTICMTSFWLGLRPP*MPFWF+ALRKRKLCSLTLV*SN H*HLVNQRG*TSNMV F*FHMTHSILMIVGG*RPYHALVTIWTW*TLLV*AWRVSSHILLGNHFTTS*R+RVGRM**G CF VS T M S MK ERKS VVI G*+ CFS*A+M+ +L+ LSL+ +M+NG K * IW+Q G GL +W *++ V+ DV M++L++S MN G SN*A V L+A+I I+V P W S N *SF S + KL++*G QS T +S TLS+ + H*M ATM Subject 3902 WMN*EK*NDLLLTSFQ*MDRR*LTFQALRGLKSCRDVC*EA*LVL*VMRNLMIPSHGSQGYQLQISNLGN*QSCLELLEQAKAFCTKAL*RGLKVSS*PLFHPGGL*LIQLKRTWKWMMVAKWQRQANQREKVGTL*PLKYFSERLKI*RQAIV*FLMRSSFFLLATLTFVY*PYEVTLSFHLLVTPVKAHMTPKRTARY*GLSKVTY*DYLRASPTGTILRAGGL*IQCLSPDCHVILRRAP*LQRSLTMPFFTICMTSFWLGLRPP*MPFWFRALRKRKLCSLTLV*SNLH*HLVNQRG*TSNMVEF*FHMTHSILMIVGG*RPYHALVTIWTW*TLLV*AWRVSSHILLGNHFTTS*RQRVGRM**GICFQVSQTFSMVSASTSVRMKVYERKSCVVIRG*KLCFS*ARMKTVKLKSLSLSVQMKNGSKHTYP*AIWSQPGLDGLGKWL*KSIVRYDVGMRQLSNSSMNTGGAWVSN*AMLVSVLRAFILDIRVMTPSPF*WPSENA*SFQSHRWKLRS*GVQSLTENSCSTLSYQKSH*MLATM 5545
Range 6: 2927 to 4015 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
834.1 bits(1814) | 0.0 | 350/363(96%) | 0/363(0%) | Minus/Minus |
Query 4 ANIPAAFQPSQSLESKLSSIHSLKGGQEQIVSLLSAHPPLCSAGHCQSSQHVLYVHWLCQIKLTCVR*D**PRFLH*CHTWHKCRMLRRPQRGTSCSGHHLGTILQRCDLWKVCTDS*GHPPHVCRAQRQ*RLSCSHSMGHRVENDLIASTKFHIKATHYLQISNLPHTLG***SASHDA*CRIRLSSRSLHKHCHQVASKQFGLTELDLQWIHFQQMNVCQLSKQARLCSTRNPLSAKSSYHHQAQKIC*SHQCHNQQRPQFDNQVVLL*TLKRNIPSCGLSICQEISQEPCKILQIWSHLQFS*C*SPL*IPQKIPKSLVHSWYPLQVHLQGLVLIASCS*AHLAT*ISLHQLLQRQLGHT 1092 ANIPAAFQPSQSLESKLSSIHSLKGGQEQIVSL S HPPLCSAGHCQSSQ VLYVHWLCQIKLTCVR*D**P+FLH* HTWHKCRMLRRPQRGTSCSGHHLGTILQR DLWKVCTDS*GHPPHVCRAQRQ*RLSCSHSMGHRVENDLIASTKFHIKATHYLQISN PHTLG***SASHDA*CRIRLSSRSLHKHC QVASK FGLTELDLQWIHFQQMNVCQLSKQARLCSTRNPLSAKSSYHHQAQKIC*SHQCHNQQRPQFDN+VVLL*TLKRNIPSCGLSICQEISQEPCKILQIWSHLQFS*C*SPL*IPQKIPKS VHS YPLQVHLQGLVLIASCS*AHLAT*ISLHQ LQRQLGHT Subject 2927 ANIPAAFQPSQSLESKLSSIHSLKGGQEQIVSLFSVHPPLCSAGHCQSSQRVLYVHWLCQIKLTCVR*D**PQFLH*YHTWHKCRMLRRPQRGTSCSGHHLGTILQRYDLWKVCTDS*GHPPHVCRAQRQ*RLSCSHSMGHRVENDLIASTKFHIKATHYLQISNSPHTLG***SASHDA*CRIRLSSRSLHKHCRQVASKLFGLTELDLQWIHFQQMNVCQLSKQARLCSTRNPLSAKSSYHHQAQKIC*SHQCHNQQRPQFDNRVVLL*TLKRNIPSCGLSICQEISQEPCKILQIWSHLQFS*C*SPL*IPQKIPKSSVHSRYPLQVHLQGLVLIASCS*AHLAT*ISLHQWLQRQLGHT 4015
Range 7: 4058 to 5560 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
773.6 bits(1682) | 0.0 | 387/501(77%) | 0/501(0%) | Minus/Minus |
Query 1135 HASG*HCGLHSVEP*KGKCLVRTSRMALRASILQLQLEA*KTLDVS*QP*GRLPNRYLYALDICFQIFHTRCSIARFFHTYVHQRTVESFHNHISLHGVPSMPSFQPTWPLLIPDYLMGYGF*TIPHSSIQTQFPQPRNPHLGLRKA*PLAKDHHKAFPLALLHFAQC*R*SH*RSWAHREAXXXXXXXXXXXXXXGKVVSQQNVRGNPPRLHQ*CLPSPNCD*SVIGPLTTYDHQYGMSHVKLKSHHV*SSAPLIHQMLVLVASYQSKTAQFSFPQSLKPEWHLRRS*TEPEGSHAYCEKWHSQRTLQSWSPS*NDMAA*TQTLDSQTSGSQYYTCRTCPQVISICHFAQPLVSRGPFGSHMCFDRGHQQVK*KRHFLWSIDKGQRSQEEKAEPHQKSHNGLPLDFQSF*EILQRSQRXXXXXXXXXXXXXXNHHPFPGLF*LN*LEPSWVKQRSRTYLQTXXXXSCTESFCLLQKFQAQLSIPEI*YLKLISLRAMAWN 2637 H + *HCG HS+ GKC R AL A QL A KT V +P R + Y Y D C Q H CSIA VH+R E H HI H S P QP P L PD F*TI H + QTQ Q + H GLRKA* LA DHH AFPL LH +C* *+H*+S AH EA PLSHSPHS P GSGKVVSQQNVRGNPPRLHQ*CLPSPNCD*SVIGPLTTYDHQYGMSHVKLK HHV*SSAPLIHQMLV VASYQSKTAQFSFPQS KPEWHLRRS*TEPEGSHAYCEKWHSQ TLQSWSPS*NDMA TQTLDSQTSGSQY TCRTCPQVISICHFAQPLVSRGPFGSHMCFDRGHQQVK*KRHF+W IDKGQRSQEEKA PHQKSHNGLPLDFQSF*EILQRSQRPNLLSLICLPLPLCNHHPFPG F*LN*LEPSWVKQR RTYLQTSS*S CTESFCLLQKFQA+LSIPEI*YLKLISLRAMAWN Subject 4058 HETY*HCG*HSMGLLIGKCRAGIFRKALHALASQLPPVALKTSSVFGRPLKR*WSHYPYV*DKCSQNAHKHCSIAHPCPPCVHRRIAELPHTHIVPHDTLSKPFSQPI*PWLTPDCSRVCVF*TILHLNTQTQALQLHSLHPGLRKA*LLATDHHTAFPLVHLHSYRC*C*NH*KSLAHLEADPLSHSPHSLPLGSGKVVSQQNVRGNPPRLHQ*CLPSPNCD*SVIGPLTTYDHQYGMSHVKLKFHHV*SSAPLIHQMLV*VASYQSKTAQFSFPQSSKPEWHLRRS*TEPEGSHAYCEKWHSQ*TLQSWSPS*NDMAVWTQTLDSQTSGSQYCTCRTCPQVISICHFAQPLVSRGPFGSHMCFDRGHQQVK*KRHFVWLIDKGQRSQEEKAGPHQKSHNGLPLDFQSF*EILQRSQRPNLLSLICLPLPLCNHHPFPGPF*LN*LEPSWVKQRLRTYLQTSS*SFCTESFCLLQKFQARLSIPEI*YLKLISLRAMAWN 5560
Range 8: 4407 to 5135 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
542.2 bits(1177) | 0.0 | 234/243(96%) | 0/243(0%) | Minus/Minus |
Query 1484 WPKKSMTFSQGSPQSFSSRTPSFRPMLTLKPLKKLGSPGSKSLITFSPLFAVRKW*SGFPAKCERKPSTLTPVMFTKSKL*LKRDRAVNHLRSSVWNESCEIKIPPCLKFSPVDSPNVSVSCFIPK*DCTIFFSSKLETRMASKEVLDRARRKSCIL*KMA*SANAAVMEPFLK*HGSLDSNIGFTNLRLSILYL*DLPSSNLNMSLCSAPSIARSFWESYVL*QGSPASEMKASLLMVNRQR 2212 WPKKS+TFS GSP SFSSRTPSF PML LKPLKK GSPGS+SLITFSPLFAVRKW*SGFPAKCERKPSTLTPVMFTKSKL*LKRDRAVNHLRSSVWNESCEIKIPPCLKFSPVDSPNVSVSCFIPK*DCTIFFSSKLETRMASKEVLDRARRKSCIL*KMA*S NAAVMEPFLK*HGSLDSNIGFTNLRLSILYL*DLPSSNLNMSLCSAPSIARSFWESYVL*QGSPASEMKASL MVNRQR Subject 4407 WPKKSITFSHGSPHSFSSRTPSFLPMLMLKPLKKFGSPGSRSLITFSPLFAVRKW*SGFPAKCERKPSTLTPVMFTKSKL*LKRDRAVNHLRSSVWNESCEIKIPPCLKFSPVDSPNVSVSCFIPK*DCTIFFSSKLETRMASKEVLDRARRKSCIL*KMA*SVNAAVMEPFLK*HGSLDSNIGFTNLRLSILYL*DLPSSNLNMSLCSAPSIARSFWESYVL*QGSPASEMKASLRMVNRQR 5135
Range 9: 3161 to 3862 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
482.6 bits(1047) | 0.0 | 227/234(97%) | 0/234(0%) | Plus/Plus |
Query 238 AN*ESTGRNVPFQGLEKYYLVVKLRPLLIMTLMTLTNFLCLVMVTAFGTQWVSC*AQTGLL*KLAYVHLLKVNPLQIQLCQPKLF*SNLVTMLMQRTR**PYSALGIM*G*SSSPQSMR*VGNLEIVSGLYVEFCACNQIIFNPVPH*MXXXXXXXXXRSADVRWMSLTICADLPQITSLKNCAKVVA*T*CTSLRPSKHSTFVPSVTLMEKSRLLILADACQLYLT*PMNI*D 939 AN*ESTGRNVPFQGLEKYY VVKLRPLLIMTLMTLTNFLCLVMVTAFGTQWVSC*AQTGLL*KLAYVHLLKVNPLQIQLCQPK F*SNL TMLMQRTR**PYSALGIM*G*S SPQSMR*VGNLEIVSGLYVEFCACNQIIFNPVPH*MAA**PLLPLRSADVRWMSLTICADLPQI SLKNCAKVVA*T*CTSLRPSKHSTFVPSV LMEK RLLILADACQLYLT*PMNI*D Subject 3161 AN*ESTGRNVPFQGLEKYYSVVKLRPLLIMTLMTLTNFLCLVMVTAFGTQWVSC*AQTGLL*KLAYVHLLKVNPLQIQLCQPKQF*SNLATMLMQRTR**PYSALGIM*G*SLSPQSMR*VGNLEIVSGLYVEFCACNQIIFNPVPH*MAA**PLLPLRSADVRWMSLTICADLPQIISLKNCAKVVA*T*CTSLRPSKHSTFVPSVILMEKLRLLILADACQLYLT*PMNI*D 3862
Range 10: 5188 to 5574 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
293.9 bits(635) | 0.0 | 119/129(92%) | 0/129(0%) | Plus/Plus |
Query 2265 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMHEAVQE 2651 WFKTHIPLSNLESTRARWVGKMALKE+REVRCGYE TQQFFDEHR G EQLSNACERFESIYPRHKGNDS+TFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHN ++ HEAVQE Subject 5188 WFKTHIPLSNLESTRARWVGKMALKEYREVRCGYEATQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVSMFHEAVQE 5574
Range 11: 2928 to 3278 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
267.3 bits(577) | 0.0 | 113/117(97%) | 0/117(0%) | Plus/Plus |
Query 5 V*PSCLCNNWCRLI*VARCA*EQEAINTSP*RCTCNGYQLWTKDFGIF*GIQRGLQH*EN*RWLHICNILQGSCEISWQIESPQDGMFLFRV*RSTTWLSN*GLC*L*H**L*QIFC 355 V*PSCLCN+WCRLI*VARCA*EQEAINTSP*RCTCNGY+LWT+DFGIF*GIQRGLQH*EN*RWLHICNILQGSCEISWQIESPQDGMFLFRV*RSTT LSN*GLC*L*H**L*QIFC Subject 2928 V*PSCLCNHWCRLI*VARCA*EQEAINTSP*RCTCNGYRLWTEDFGIF*GIQRGLQH*EN*RWLHICNILQGSCEISWQIESPQDGMFLFRV*RSTTRLSN*GLC*L*H**L*QIFC 3278
Range 12: 5187 to 5573 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
218.7 bits(471) | 0.0 | 97/129(75%) | 0/129(0%) | Minus/Minus |
Query 2264 SCTASCIRLALWLAFSGTLERKVSSKNFPYGFARLNFAAST*GLENFRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNC*VVS*PHLTSRCSFNAIFPTHLALVDSRLLNGIWVLNH 2650 SCTAS L LWLAF+GT +RKVSS+NFP GFARL+FAAST G ENF+RF TA++KV ESLPLCLG MLS S ALLNCS +P LCSSKNC*V S PH TSR SF AIFPTHLALVDSRLL G+ VLNH Subject 5187 SCTAS*NILTLWLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPMPPLCSSKNC*VASYPHRTSRYSFKAIFPTHLALVDSRLLKGMCVLNH 5573
Range 13: 2927 to 3124 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
152.7 bits(327) | 0.0 | 64/66(97%) | 0/66(0%) | Plus/Plus |
Query 4 SVTELSLQQLVQAYLSC*MCLGARSNQY*SLKVHLQWIPAMDQRFWDLLRYSKGTSTLRKLKMAPY 201 SVTELSLQ LVQAYLSC*MCLGARSNQY*SLKVHLQWIPAMD+RFWDLLRYSKGTSTLRKLKMAPY Subject 2927 SVTELSLQPLVQAYLSC*MCLGARSNQY*SLKVHLQWIPAMDRRFWDLLRYSKGTSTLRKLKMAPY 3124
Range 14: 5179 to 5571 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.9 bits(240) | 0.0 | 59/131(45%) | 0/131(0%) | Minus/Minus |
Query 2256 LYGFMHQVSIVACIQWNLRKESV**ELPVWLCAPQFCSFNLRLRKL*TFPDSHEEGYRIVTFMPWIYAFKSFTRVAQLLASSTPMFIKELLSRFITTSHFTVFLQCHLSNPPGPC*FQIT*WDMGFKPFLI 2648 L+ M IVA IQW+ ESV E V LC P SF+L L KL F D H +G ++T M I A K+ T +AQLL + P+FI+ELLS I TS+ T+ Q H NP P * QI + F+PF I Subject 5179 LHCLMKHTDIVASIQWDF**ESVEQEFSVRLCTP*LRSFHLWL*KLQAFSDGH*KGDGVITLMSRINALKTLTSIAQLLTHAPPVFIEELLSCLIPTSYLTILFQSHFPNPSSPG*LQIAQGYVCFEPFFI 5571
Range 15: 5337 to 5546 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
58.3 bits(121) | 0.0 | 31/70(44%) | 0/70(0%) | Plus/Plus |
Query 2414 AIEQRV*KI*KHISKA*R*RFGNLPHGCQETSKVF*ASS*SCKIEARKAIREVLTRHFPF*GSTECKPQC 2623 AIEQ +* *+H+S * * +L +G +T +VF A+ SC+ +A KA+R++ RHFP EC PQC Subject 5337 AIEQCL*AF*EHLS*T*G**LHHLFNGRPKTLEVFKATGGSCEAKACKALRKIPARHFPIKSPIEC*PQC 5546
Range 16: 5163 to 5318 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.3 bits(99) | 0.0 | 23/52(44%) | 0/52(0%) | Plus/Plus |
Query 2240 *V*MLE*GMV*NPYPIK*SGINKGQVGWKDGIEGTP*SEMWL*NDSTVL**T 2395 *V*+ +* MV N + ++ SG+N+G +GW++G E * MW+* +S +L *T Subject 5163 *V*VFK*RMVQNTHTLEQSGVNQG*MGWENGFERVS*GTMWV*GNSAILR*T 5318
Grapevine rupestris stem pitting associated virus isolate CS BR, complete genome
Sequence ID: KX958435.1 Length: 8743 Number of Matches: 16
Range 1: 2927 to 5137 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1746.4 bits(3805) | 0.0 | 723/737(98%) | 0/737(0%) | Plus/Plus |
Query 3 QCDRVVFATTGAGLSKLLDVPRSKKQSILVLEGALAMDTSYGPKILGSFEVFKGDFNIKKIEDGSIFVISYRAPVRSPGKLRVHRTECSFSGSREVLLGCQIEASADYDIDDFNKFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESIADPALSTQTVLKQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMSALFDITNEHIRHVEKIGNGPQSIKVDELREVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGVSVEGFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQ 2213 QCDRVVFATTGAGLSKLLDVPRSKKQSILVLEGALAMDT YGPK+LGSFEVFKGDFNIKKIEDGSIFVISYRAPVRSPGKLRVHRTECSFSGS+EVLLGCQIEASADYDIDDFNKFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESES+ADPALSTQTVLKQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRM ALFDITNEHIRHVEKIGNGPQSIKVDELR+VKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK+DLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKT LD ILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITG+SVEGFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGF+++IG+NEGVREEKLCGDPWLKVMLFLGQ Subject 2927 QCDRVVFATTGAGLSKLLDVPRSKKQSILVLEGALAMDTGYGPKVLGSFEVFKGDFNIKKIEDGSIFVISYRAPVRSPGKLRVHRTECSFSGSKEVLLGCQIEASADYDIDDFNKFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESLADPALSTQTVLKQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMPALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTPLDVILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGISVEGFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFSINIGKNEGVREEKLCGDPWLKVMLFLGQ 5137
Range 2: 2927 to 5128 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1390.8 bits(3029) | 0.0 | 600/734(82%) | 0/734(0%) | Minus/Minus |
Query 3 EKHDL*PRITTKLFLSHSFISPNANVEAIKEVGLTGKQVPYHILPTLRRQEVVKWFPSKM*EETLHAYTSNVYQVQIVTKA**GR*PPTIISME*VM*N*NPTMFEVQPR*FTKC*C*LLHTKVRLHNFLFLKA*NQNGI*GGLRPSQKEVMHIVKNGIVSERCSHGALLKMTWQPRLKHWIHKPPALNIIPVGLALK*SQYVTLLSP*YRAVLLGVICALTGVTSK*NESVTSYGQ*TKVNVARRKKLNLIKNHTMACL*IFNLSEKYFKGHNVPTFSL*FACLCHFATIIHFQVFFN*IS*SPPG*NKGHELTFRPLHEALVQKAFACSKSSKHNCQFPRFDI*S*YP*EPWLGIIKFLITYNTS*AS*QTSLQLFSPLKAWKVSYLRSIH*KEVKSRSFHFSQLIHLYALRAIANLLNMSYMFIGYVK*S*HASARINNLDFSINVTLGTNVECFEGLSEVHHVQATTLAQFFKDVICGRSAQIVKDIHLTSAERRGNSGYHAAIQWGTGLKMI*LQAQNST*RPLTISKFPTYLILWGDDDQPHMMPNAE*GYHLVLCISIVTKLLQNSLG*QSWICNGFTFNK*TYASFQSKPVCAQQETH*VPKAVTITRHRKFVKVINVIISRGLNLTTK*YFSRP*KGTFRPVDSQFARRSHRSPVRYYKYGAIFNFLNVEVPFEYLKRSQNLWSIAGIHCKCTFKD*Y*LLLAPRHI*QLR*ACTSCCKDNSVTL 2204 EKH+ *PRITT+LFLS++FI + + E I++V LT K +PYHILPTL Q+VVKWFPS+M*EETLHAY SN+YQVQ+V +A**GR*PP +ISME*VM*N*N TMFEVQPR*F+KC*C LLHTKVRLHNFL LKA*N N I*G LRPSQKEVMHIVKNGIVSE CSHGALL+MTW RLKHWIHK P LN++PVGLALK QY+TLL P*Y AVLLGVICALTGVTS+*NESVTSYG T+VN+A RK+LNLI++HTMACL*IFNLSEK+FKGHNVPT SL*FACLCHFATIIHFQV FN*I *SPPG*NKG+E TFR LHEALVQKAFA SKSSKHNC FPRFDI*S*Y *+PWLGIIKFLITY+TS*AS* TSLQLF P KAWKVSY RSIH*+EVKSRSFHFSQ IHLYALRA+ NLL+MSYMFIGYVK S HASARI+N + IN+TL TNVECFE LSE+HHVQ+TTLAQFFK+VICG S QIVK+IH TSAER GNS HA+IQWGTGLKMI*LQAQNST*RPL +SK PT+ I WG++ QPHMMPNAE*GYHL+LCISIVTKLLQNSLG*QSWIC GFTF+K TY SFQSKP+CAQQE H*VPKAV ITR+RKFVKVIN+IISRGLNLTT+*+F R KGTFRPVDSQFARR HRSPVRY+KYGAIFNFLNV+VPFEYLKRSQNLW IAGIHCKCTFKD*Y*LLL PRHI* L ACTSCCK+NS+TL Subject 2927 EKHNF*PRITTQLFLSYTFILTDVDAETIEKVWLTWK*IPYHILPTLCCQKVVKWFPSEM*EETLHAYASNIYQVQVVAEA**GR*PPAVISME*VM*N*NSTMFEVQPR*FSKC*CKLLHTKVRLHNFLLLKA*N*NDI*GSLRPSQKEVMHIVKNGIVSESCSHGALLEMTW*SRLKHWIHKSPTLNVVPVGLALKQPQYITLLGP*YCAVLLGVICALTGVTSE*NESVTSYG*QTQVNIAWRKQLNLIEDHTMACL*IFNLSEKHFKGHNVPTLSL*FACLCHFATIIHFQVSFN*IG*SPPG*NKGYEFTFRSLHEALVQKAFASSKSSKHNC*FPRFDI*S*YS*KPWLGIIKFLITYHTS*AS**TSLQLFCPFKAWKVSYFRSIH*EEVKSRSFHFSQFIHLYALRAVTNLLDMSYMFIGYVKQSWHASARIDNFNLPINITLSTNVECFESLSEIHHVQSTTLAQFFKNVICGGSTQIVKNIHFTSAERGGNSCDHASIQWGTGLKMI*LQAQNST*RPLAVSKLPTHFIFWGNNYQPHMMPNAE*GYHLILCISIVTKLLQNSLG*QSWICKGFTFDKRTYTSFQSKPICAQQEAH*VPKAVAITRNRKFVKVINIIISRGLNLTTE*HFLRSRKGTFRPVDSQFARRPHRSPVRYHKYGAIFNFLNVKVPFEYLKRSQNLWPIAGIHCKCTFKD*Y*LLLTPRHI**LGQACTSCCKNNSITL 5128
Range 3: 2926 to 5127 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1342.2 bits(2923) | 0.0 | 590/734(80%) | 0/734(0%) | Plus/Plus |
Query 2 SV*PSCLCNNWCRLI*VARCA*EQEAINTSP*RCTCNGYQLWTKDFGIF*GIQRGLQH*EN*RWLHICNILQGSCEISWQIESPQDGMFLFRV*RSTTWLSN*GLC*L*H**L*QIFCXXXXXXXXXXSGFLVEHRRACFESWHTFIC*K*IHCRSSSVNPNCFEATW*QCLCRERDDSLILH*ASCEADHHHPRV*GKLEIWR**VAFMWNFVLAIKSFSTLCPIEWLHDNRYCLCARQT*GGCP*LSVQTFHKSHL*RIVPRWWPEHDVPR*GLRSIRHLCQV*H*WRNRGY*S*RTHVSFI*HNQ*TYKTC*EDWQWPAEHKGG*AERSETICS*PPFNEWIEDNLLSKL*EG*KAAGMFARRLNWCYK**EI**FQAMALRDINFKYQISGIDSCAWNFWSRQKLSVQELHEEV*R*VRDLCFTQEGSS*FN*KRPGNG*WLQSGKGRQIKERRLGRCDL*SISQKD*KSKGRPLCDF**GSAFSSWLR*PLSIDHKK*RFHFTCW*PLSKHI*LPKGPRDTRG*AK*HIEIT*GQVLQV*Y*EPEVCESNV*V*AAMSF*EGLHDCSVR*LCHFSQYA*LPSGSV*DLLRCHSGFKL*GKENCAVLLWYEATNTNIW*INGAELQTWWDFNFT*LIPY**S*VVNGPITL*SQFGLGKHYWCKRGGFPLTFCWETTLPLPDGEEWGECDKGLASR*AQLL*WLQR*HWAK*RSARGKALW*SLAKGHAF 2203 SV* SC CNNWCRL+ RCA*E EAINTSP*RCTCNGY+LW K FGIF*GIQRGL H*EN*RWLHIC+ILQGSCE+SWQIESPQDGMFLF +* S T LSN*GLC*L*+**L*QIFC+W*W LLLALSG LVEHR ACFESW+TF+C K*I CRSSSVNPNCFEATW*QCLCRE DDSLILH*ASCE D+++PR+* +LE+WR VAFMWNFVLA+KSFSTLCPIEW+HD+ YCL ARQT* GC *LSV T HKSH *RIVPRWW EHDV R*G RSIRHLC V*+*W + Y S*RTH S +*HNQ*TYKTC EDW PA+HKGG* E+SETICS*PP NEWIE+NLLSKL*+G KAA MF RRLNWC K**EI**FQAMA R+INFKYQISGI+SCAWNFWS QKL VQELHEE+*R*+R+LCFTQEGSS FN*KRPGNG*WLQSGKGRQIKER LGRCDL*S+SQKD*KSKGRPLCD *GSA SS L *P+S +H K*RFHFT W*PLSKHI*LPKGPR+TRG AK*+IE+ *GQVLQV +*E E+CESNV*V* MSF EGLHDCS R*LCHFSQYA*LPSG V*D RCHS FKL*G+ENCAVLLWYEAT TNIW INGAELQTWW+FNFT*LIPY** VVNGPITL Q GLGK+YW KRGGFPLTF WETTLPL D +EWGECDKG SR*A+L W Q H +*R RGKA+W*S+AK +AF Subject 2926 SV*SSCFCNNWCRLVQATRCA*E*EAINTSP*RCTCNGYRLWAKGFGIF*GIQRGL*H*EN*RWLHICDILQGSCEVSWQIESPQDGMFLFWI*GSATRLSN*GLC*L*Y**L*QIFCSW*WQLLLALSGLLVEHRWACFESWYTFVCRK*IPCRSSSVNPNCFEATW*QCLCRE*DDSLILH*ASCEVDNYYPRI*SELEVWRQRVAFMWNFVLAVKSFSTLCPIEWMHDHSYCLRARQT*SGCS*LSV*TLHKSHF*RIVPRWWTEHDVSR*GFRSIRHLC*V*Y*WGD*SYQS*RTHASSV*HNQ*TYKTCREDW*RPAKHKGG*TEKSETICS*PPLNEWIENNLLSKL*KGRKAARMFTRRLNWCDK**EI**FQAMAFRNINFKYQISGINSCAWNFWSWQKLFVQELHEEI*R*IRNLCFTQEGSSQFN*KRPGNG*WLQSGKGRQIKERGLGRCDL*SVSQKD*KSKGRPLCDLR*GSAVSSRLC*PVSANHTK*RFHFTRW*PLSKHI*LPKGPRNTRGRAK*YIEVA*GQVLQVQH*ESEICESNV*V*TTMSFQEGLHDCSFR*LCHFSQYA*LPSG*V*DSPRCHSSFKL*GEENCAVLLWYEATYTNIWRINGAELQTWWNFNFT*LIPY**PQVVNGPITLQPQLGLGKYYWHKRGGFPLTFRWETTLPLSDSKEWGECDKGSTSR*AKLFQWFQHQHR*E*RCTRGKAVW*SVAKSYAF 5127
Range 4: 2926 to 4368 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1045.8 bits(2276) | 0.0 | 464/481(96%) | 0/481(0%) | Minus/Minus |
Query 2 ITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRSFLIELARALLGETKVTNLPSDLFMKLLYRKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTSLSSSTFMLCGPLPIFSTCLICSLVMSNKADMRPLGLITSISPLMSHLAQMSNASKASARYIMFRPPPWHNSSKM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHKGHSLSPNFQLTSYSGVMMISLT*CLMQNKAIISFSA*ALSPSCFKTVWVDRAGSAMDSLSTNERMPAFKASPSVLNKKPTECQKQLPSPGTENLLKXXXXXXXXXSI*QPSSTSLDPEKEHSVLWTLNLPGDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKIFGP*LVSIASAPSRTSIDCFLLLGTSSNLDKPAPVVAKTTRSH* 1444 ITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRS LIELARALLGETKVTNLPSDLFMKLLY+KLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFT LSSSTFMLCGPLPIFSTCLICSLVMSN+A MRPLGLITSISPL+SHLAQMSNASKASARYIMF PPPWHNSSKM*FVEGLHR*LRTSTSRLPSAEAIAVIM PFNGAQG*K*FDCKHKIPHKGHSLSPNFQLTSYSGV++I+LT*CLMQNKAIISFSA*ALSPSCFKTVWVDRAGSA DSLSTNER+PAFKASPSVLNKKPTECQKQLPSPGTENLLKSS+S*SAEASI*QPSSTSLDPEKEHSVLWTLNLPGDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPK FGP* VSIASAPSRTSIDCFLLLGTSS+LDKPAPVVAKTTRSH* Subject 2926 ITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRSLLIELARALLGETKVTNLPSDLFMKLLYKKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTFLSSSTFMLCGPLPIFSTCLICSLVMSNRAGMRPLGLITSISPLISHLAQMSNASKASARYIMFSPPPWHNSSKM*FVEGLHR*LRTSTSRLPSAEAIAVIMHPFNGAQG*K*FDCKHKIPHKGHSLSPNFQLTSYSGVIIINLT*CLMQNKAIISFSA*ALSPSCFKTVWVDRAGSARDSLSTNERIPAFKASPSVLNKKPTECQKQLPSPGTENLLKSSIS*SAEASI*QPSSTSLDPEKEHSVLWTLNLPGDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKTFGP*PVSIASAPSRTSIDCFLLLGTSSSLDKPAPVVAKTTRSH* 4368
Range 5: 3903 to 5549 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
829.0 bits(1803) | 0.0 | 403/549(73%) | 0/549(0%) | Plus/Plus |
Query 979 WMS*EK*NDLLLTSFQ*MDRR*LTFQALRGLKSCRDVC*EA*LVL*VMRNLMIPSHGSQGYQLQISNLGN*QLCLELLEQAKAFCTRAS*RGLKVSS*PLFHPGGL*LIQLKKTWKWMMVAKWQRQANQREKVGTL*PLKYFSERLKI*RQAIV*FLMRFSFFLLATLTFVY*P*EVTLSFHLLVTPVKAHMTPKRTARY*GLSKVTY*DYLRASPTGIILRAGGL*IQCLSLGCHVILRRAP*LQRSLTMPFFTICMTSFWLGLRPP*MPFWFQALRKRKLCSLTLV*SN*H*HLVNQRG*TSNMVGF*FHMTHSILMIVGG*RPYHALVTIWTW*TLLV*AWRVSSHILLGNHFTTS*RRRVGRM**GTCFPVSPTSLMASTLALGEMKECERKSFVVILG*RSCFS*AKMRIARLRKLSLNARMRNGLKPISH*VIWNQQGPGGLERWH*RNTVK*DVVMKRLNSSLMNIGVEEASN*ATRVKDLKAYIQGIKVTIR*PSSWLSGNV*SFLSLKLKLQN*GAQSHTGSSY*TLSFLRFH*MQATML 2625 WM+*EK*NDLLLTS Q*MDR+*LTFQAL+G KSC+DV *EA*LV *VMRNLMIPSHG Q YQLQISNLGN*QLCLELLE AKAFCTRAS*R LKV+S*PLFHPGGL* IQLK+TWKWMMVAKWQRQANQRE+VGTL*PLK FSERLKI*RQAIV* MRFS FL A LT V *P EVTLSFH LVTPVKAHMTPKRTA+Y*G SKV Y* LRASPTG LR G L*IQCLSL HVI RRAP*LQ SLTMPFFTICMTSFWLGLR P*M F FQALR+RKLCSLTLV*SN H*HL NQRG*TSNMV F*FHMTHSILM GG*RPYHA T WTW* LL *AWRVSSHI LGNHFTT *++RVGRM**G F VS T M S MK ERKS VVI G*+ CFS*A+MR +L+ LSL+ +M+NG K * IW+Q G GL +W *R+TV+ DV MK+L++S MN G E ASN*A V LKA+I + P W S N *SF S + KL++*G QS G+S TLS+ + H*M ATML Subject 3903 WMN*EK*NDLLLTSSQ*MDRK*LTFQALKGQKSCKDVY*EA*LV**VMRNLMIPSHGFQEYQLQISNLGN*QLCLELLELAKAFCTRAS*RDLKVNS*PLFHPGGL*PIQLKETWKWMMVAKWQRQANQRERVGTL*PLKCFSERLKI*RQAIV*SSMRFSCFLQAMLTCVC*PYEVTLSFHSLVTPVKAHMTPKRTAQY*GPSKVIY*GCLRASPTGTTLRVGDL*IQCLSLDYHVISRRAP*LQLSLTMPFFTICMTSFWLGLRLP*MSF*FQALRRRKLCSLTLV*SNLH*HLENQRG*TSNMVEF*FHMTHSILMTAGG*RPYHASATTWTW*ILLA*AWRVSSHISLGNHFTTF*QQRVGRM**GIYFQVSQTFSMVSASTSVRMKVYERKSCVVIRG*KLCFS*ARMRTVKLKSLSLSVQMKNGSKHTYP*AIWSQPGLDGLGKWP*RSTVRYDVGMKQLSNSSMNTGGEWASN*AMPVNVLKAFILDTRAMTPLPF*WPSENA*SFQSHRWKLRS*GVQSLMGNSCLTLSYRKSH*MLATML 5549
Range 6: 2925 to 4013 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
671.4 bits(1459) | 0.0 | 295/363(81%) | 0/363(0%) | Minus/Minus |
Query 1 NIPAAFQPSQSLESKLSSIHSLKGGQEQIVSLLSAHPPLCSAGHCQSSQHVLYVHWLCQIKLTCVR*D**PRFLH*CHTWHKCRMLRRPQRGTSCSGHHLGTILQRCDLWKVCTDS*GHPPHVCRAQRQ*RLSCSHSMGHRVENDLIASTKFHIKATHYLQISNLPHTLG***SASHDA*CRIRLSSRSLHKHCHQVASKQFGLTELDLQWIHFQQMNVCQLSKQARLCSTRNPLSAKSSYHHQAQKIC*SHQCHNQQRPQFDNQVVLL*TLKRNIPSCGLSICQEISQEPCKILQIWSHLQFS*C*SPL*IPQKIPKSLVHSWYPLQVHLQGLVLIASCS*AHLAT*ISLHQLLQRQLGHTD 1089 NI AAF P QSLESKL SIHSL+GGQEQIVSL S HPPLC AG QSS+HVLYVHWLCQ +L CVR*D** + H* HT HKCRMLR+PQR TSCS HHLGTILQ+CDLW+V TDS* HP HVCRA+RQ* SC HSMGHRVENDL ASTKFHIKAT LQ SN H LG** S SHDA*CRIRLSS SLHKHCHQVASKQFGLTELDLQ IHF+Q NV QLSKQA LCSTR+PLSAKSS HHQ QKIC*SHQ HNQQRPQFDN+V L * KRNIPSCGLSICQE SQEPCKI QIWSHLQFS*C*SPL*IPQKIPK L HS YPLQVHLQGLVLIAS S*AHL SLHQLLQ+QL HTD Subject 2925 NILAAFLPFQSLESKLFSIHSLRGGQEQIVSLFSVHPPLCFAGRYQSSRHVLYVHWLCQTELACVR*D**LQSPH*YHT*HKCRMLRKPQRDTSCSVHHLGTILQKCDLWRVYTDS*EHPLHVCRARRQ*L*SCIHSMGHRVENDLTASTKFHIKATRCLQTSNSLHILG**LSTSHDA*CRIRLSSHSLHKHCHQVASKQFGLTELDLQGIHFRQTNVYQLSKQAHLCSTRSPLSAKSSCHHQEQKIC*SHQYHNQQRPQFDNRVALP*IQKRNIPSCGLSICQETSQEPCKISQIWSHLQFS*C*SPL*IPQKIPKPLAHSRYPLQVHLQGLVLIASYS*AHLVAWTSLHQLLQKQLDHTD 4013
Range 7: 4059 to 5378 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
658.1 bits(1430) | 0.0 | 331/440(75%) | 0/440(0%) | Minus/Minus |
Query 1135 DICFQIFHTRCSIARFFHTYVHQRTVESFHNHISLHGVPSMPSFQPTWPLLIPDYLMGYGF*TIPHSSIQTQFPQPRNPHLGLRKA*PLAKDHHKAFPLALLHFAQC*R*SH*RSWAHREAXXXXXXXXXXXXXXGKVVSQQNVRGNPPRLHQ*CLPSPNCD*SVIGPLTTYDHQYGMSHVKLKSHHV*SSAPLIHQMLVLVASYQSKTAQFSFPQSLKPEWHLRRS*TEPEGSHAYCEKWHSQRTLQSWSPS*NDMAA*TQTLDSQTSGSQYYTCRTCPQVISICHFAQPLVSRGPFGSHMCFDRGHQQVK*KRHFLWSIDKGQRSQEEKAEPHQKSHNGLPLDFQSF*EILQRSQRXXXXXXXXXXXXXXNHHPFPGLF*LN*LEPSWVKQRSRTYLQTXXXXSCTESFCLLQKFQAQLSIPEI*YLKLISLRAMAWN 2454 D CFQ H C IAR F VH+R E FH HI HG PS P QP P L P+ F*TI H + QTQ Q +PH GLRKA* LA DHH AFPL LH +C* *+H*+S AH E PLSHSPHS S SGKVVSQ+NVRGNPPRL Q* LPSP+C *SVIGPLTT HQYGMSHVKLK HHV*SSAPLI QMLV VASYQSKTAQFS PQSLK E HL S*T PEGSHAYCEKWHSQR LQSWSPS*NDM *TQTLDSQ S SQ TCRTCPQ SI HFA+PLV RGPFGSHMCFDRGHQ+VK*KRHF+W D GQ S EE AEPH++SHNGLPLDFQSF*E LQRSQRPN LSLICLPLPLCNHHPFPGLF*LN LEPSWVKQR R YLQ SS*SSCT+SFC LQKFQAQL IPEI*YLKLI L+AMAWN Subject 4059 DKCFQNVHRHCLIARPFPPCVHRRIAELFHTHIVPHGAPSRPFSQPI*PWLTPNCSRVCVF*TILHLNTQTQALQLHSPHPGLRKA*LLATDHHTAFPLVHLHSYRC*C*NH*KSLAHLEVDPLSHSPHSLLSESGKVVSQRNVRGNPPRLCQ*YLPSPSCG*SVIGPLTTCGHQYGMSHVKLKFHHV*SSAPLILQMLV*VASYQSKTAQFSSPQSLKLE*HLGES*T*PEGSHAYCEKWHSQRKLQSWSPS*NDMVV*TQTLDSQISDSQCCTCRTCPQATSIYHFARPLVLRGPFGSHMCFDRGHQRVK*KRHFVWLADTGQHSLEETAEPHRRSHNGLPLDFQSF*ETLQRSQRPNPLSLICLPLPLCNHHPFPGLF*LNWLEPSWVKQRLRIYLQISS*SSCTKSFCQLQKFQAQLLIPEI*YLKLIFLKAMAWN 5378
Range 8: 4408 to 5136 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
517.0 bits(1122) | 0.0 | 223/243(92%) | 0/243(0%) | Minus/Minus |
Query 1484 WPKKSMTFSQGSPQSFSSRTPSFRPMLTLKPLKKLGSPGSKSLITFSPLFAVRKW*SGFPAKCERKPSTLTPVMFTKSKL*LKRDRAVNHLRSSVWNESCEIKIPPCLKFSPVDSPNVSVSCFIPK*DCTIFFSSKLETRMASKEVLDRARRKSCIL*KMA*SANAAVMEPFLK*HGSLDSNIGFTNLRLSILYL*DLPSSNLNMSLCSAPSIARSFWESYVL*QGSPASEMKASLLMVNRQR 2212 WPKKS+TFS GSP SFSSRTPSF PML LKPLKK GSPGS+SLITFSPLFAVRKW*SGFPAKCERKPSTL PV+FTKSKL LKRDRAVNHLRSSVWNESCEIKIPPCLKFSPVDSPNVSVSCFIPK*DCTIFFSSKLETRM S+ VLD ARRKSCIL*KMA*SA AAVMEPFLK*HGSLDSNIGFTNLRLS+LYL*DLPSSNLN+SLCSAPSIARSFWESYVL*QGSPASEMKASL MV+R R Subject 4408 WPKKSITFSHGSPHSFSSRTPSFLPMLMLKPLKKFGSPGSRSLITFSPLFAVRKW*SGFPAKCERKPSTLMPVIFTKSKLWLKRDRAVNHLRSSVWNESCEIKIPPCLKFSPVDSPNVSVSCFIPK*DCTIFFSSKLETRMTSRGVLDLARRKSCIL*KMA*SAKAAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVL*QGSPASEMKASLRMVSRHR 5136
Range 9: 3162 to 3863 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
396.0 bits(858) | 0.0 | 191/234(82%) | 0/234(0%) | Plus/Plus |
Query 238 AN*ESTGRNVPFQGLEKYYLVVKLRPLLIMTLMTLTNFLCLVMVTAFGTQWVSC*AQTGLL*KLAYVHLLKVNPLQIQLCQPKLF*SNLVTMLMQRTR**PYSALGIM*G*SSSPQSMR*VGNLEIVSGLYVEFCACNQIIFNPVPH*MXXXXXXXXXRSADVRWMSLTICADLPQITSLKNCAKVVA*T*CTSLRPSKHSTFVPSVTLMEKSRLLILADACQLYLT*PMNI*D 939 AN*ESTGRNVPF L K Y VVKLRPLLIM LMTLTNFL LVM TAFGTQW SC*AQ GLL*KL YV L KVNPLQIQLCQPKLF*SNLVTMLMQR R**PYSALGIM*G* PQ+M+*VG+LE SGLYVEFCAC+QIIFNPVPH*M A* LLP RSADV+WM LTIC D PQIT LKNCAKVV *T*C SLR SKHSTFV SV LM + +L ILADACQL LT*PMNI*D Subject 3162 AN*ESTGRNVPFLDLRKCYSVVKLRPLLIMILMTLTNFLFLVMATAFGTQWASC*AQMGLL*KLVYVRLSKVNPLQIQLCQPKLF*SNLVTMLMQRMR**PYSALGIM*G**LLPQNMK*VGSLETASGLYVEFCACSQIIFNPVPH*MDA*SQLLPPRSADVKWMFLTICVDPPQITFLKNCAKVVD*T*CISLRLSKHSTFVLSVILMGRLKLSILADACQLCLT*PMNI*D 3863
Range 10: 5189 to 5575 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
301.2 bits(651) | 0.0 | 122/129(95%) | 0/129(0%) | Plus/Plus |
Query 2265 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMHEAVQE 2651 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHR G EQLSNACERFESIYPRHKGNDS+TFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHN N+ HEAVQE Subject 5189 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVNMFHEAVQE 5575
Range 11: 5188 to 5574 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
225.6 bits(486) | 0.0 | 99/129(77%) | 0/129(0%) | Minus/Minus |
Query 2264 SCTASCIRLALWLAFSGTLERKVSSKNFPYGFARLNFAAST*GLENFRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNC*VVS*PHLTSRCSFNAIFPTHLALVDSRLLNGIWVLNH 2650 SCTAS L LWLAF+GT +RKVSS+NFP GFARL+FAAST G ENFRRF TA++KV ESLPLCLG MLS S ALLNCS +P LCSSKNC*VVS PH TSRCSF AIFPTHLALVDS+LL G+ VLNH Subject 5188 SCTAS*NILTLWLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFRRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPIPPLCSSKNC*VVSYPHRTSRCSFKAIFPTHLALVDSKLLKGMCVLNH 5574
Range 12: 2925 to 3125 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
133.5 bits(285) | 0.0 | 59/67(88%) | 0/67(0%) | Plus/Plus |
Query 1 VSVTELSLQQLVQAYLSC*MCLGARSNQY*SLKVHLQWIPAMDQRFWDLLRYSKGTSTLRKLKMAPY 201 VSV EL LQQLVQA S *MCLG RSNQY*SLKVHLQWIPAM QRFWDLLRYSKGT TLRKLKMAPY Subject 2925 VSVIELFLQQLVQACPSY*MCLGVRSNQY*SLKVHLQWIPAMGQRFWDLLRYSKGTLTLRKLKMAPY 3125
Range 13: 5180 to 5572 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
122.5 bits(261) | 0.0 | 63/131(48%) | 0/131(0%) | Minus/Minus |
Query 2256 LYGFMHQVSIVACIQWNLRKESV**ELPVWLCAPQFCSFNLRLRKL*TFPDSHEEGYRIVTFMPWIYAFKSFTRVAQLLASSTPMFIKELLSRFITTSHFTVFLQCHLSNPPGPC*FQIT*WDMGFKPFLI 2648 L+ M ++IVA I W+ R ESV E P+ LC P SF+L L KL F D H +G ++ + I AFK+FT +A LLA S P+FI+ELLS FI TS+ TV LQ H NP P * QI + F+PF I Subject 5180 LHCLMKHINIVASI*WDFR*ESVKQEFPIRLCTP*LRSFHLWL*KLQAFSDGH*KGNGVIALVSRINAFKTFTGIA*LLAHSPPVFIEELLSCFIPTSYLTVLLQGHFPNPSSPG*LQIAQGYVCFEPFFI 5572
Range 14: 5164 to 5379 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
68.4 bits(143) | 0.0 | 34/72(47%) | 0/72(0%) | Plus/Plus |
Query 2240 *V*MLE*GMV*NPYPIK*SGINKGQVGWKDGIEGTP*SEMWL*NDSTVL**T*VWKKRAIEQRV*KI*KHIS 2455 *V*+ +* MV N + ++ G+N+G +GW++G+EG P* MW+*N+S +L *T RAI+Q +* *KH+S Subject 5164 *V*VFK*RMVQNTHTLEQFGVNQG*MGWENGLEGAP*GTMWV*NNSAILR*TQGGNGRAIKQCL*TF*KHLS 5379
Grapevine rupestris stem pitting associated virus isolate VF1, partial genome
Sequence ID: KT948710.1 Length: 8716 Number of Matches: 15
Range 1: 2927 to 5137 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1745.0 bits(3802) | 0.0 | 724/737(98%) | 0/737(0%) | Plus/Plus |
Query 3 QCDRVVFATTGAGLSKLLDVPRSKKQSILVLEGALAMDTSYGPKILGSFEVFKGDFNIKKIEDGSIFVISYRAPVRSPGKLRVHRTECSFSGSREVLLGCQIEASADYDIDDFNKFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESIADPALSTQTVLKQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMSALFDITNEHIRHVEKIGNGPQSIKVDELREVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGVSVEGFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQ 2213 QCDRVVFATTGAGLSKLLDVPRSKKQSILVLEGALAMDT YGPK+LGSFEVFKGDFNIKKIEDGSIFVISYRAPVRS GKLRVHRTECSFSGS+EVLLGCQIEASADYDIDDFNKFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESES+ADPALSTQTVL+QLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMSALFDITNEHIRHVEKIGNGPQSIKVDELR+VKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK+DLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLD ILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGVSVEGFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGF+++IG+NEGVREEKLCGDPWLKVMLFLGQ Subject 2927 QCDRVVFATTGAGLSKLLDVPRSKKQSILVLEGALAMDTGYGPKVLGSFEVFKGDFNIKKIEDGSIFVISYRAPVRSLGKLRVHRTECSFSGSKEVLLGCQIEASADYDIDDFNKFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESLADPALSTQTVLQQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDVILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGVSVEGFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFSINIGKNEGVREEKLCGDPWLKVMLFLGQ 5137
Range 2: 2927 to 5128 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1386.2 bits(3019) | 0.0 | 596/734(81%) | 0/734(0%) | Minus/Minus |
Query 3 EKHDL*PRITTKLFLSHSFISPNANVEAIKEVGLTGKQVPYHILPTLRRQEVVKWFPSKM*EETLHAYTSNVYQVQIVTKA**GR*PPTIISME*VM*N*NPTMFEVQPR*FTKC*C*LLHTKVRLHNFLFLKA*NQNGI*GGLRPSQKEVMHIVKNGIVSERCSHGALLKMTWQPRLKHWIHKPPALNIIPVGLALK*SQYVTLLSP*YRAVLLGVICALTGVTSK*NESVTSYGQ*TKVNVARRKKLNLIKNHTMACL*IFNLSEKYFKGHNVPTFSL*FACLCHFATIIHFQVFFN*IS*SPPG*NKGHELTFRPLHEALVQKAFACSKSSKHNCQFPRFDI*S*YP*EPWLGIIKFLITYNTS*AS*QTSLQLFSPLKAWKVSYLRSIH*KEVKSRSFHFSQLIHLYALRAIANLLNMSYMFIGYVK*S*HASARINNLDFSINVTLGTNVECFEGLSEVHHVQATTLAQFFKDVICGRSAQIVKDIHLTSAERRGNSGYHAAIQWGTGLKMI*LQAQNST*RPLTISKFPTYLILWGDDDQPHMMPNAE*GYHLVLCISIVTKLLQNSLG*QSWICNGFTFNK*TYASFQSKPVCAQQETH*VPKAVTITRHRKFVKVINVIISRGLNLTTK*YFSRP*KGTFRPVDSQFARRSHRSPVRYYKYGAIFNFLNVEVPFEYLKRSQNLWSIAGIHCKCTFKD*Y*LLLAPRHI*QLR*ACTSCCKDNSVTL 2204 EKH+ *PRIT +LFLS++FI N + E IK++ LT KQ+PYHILPTL QEVVKWFPS+M*EETLHA+ S++YQVQ+V KA**GR*PPTIISME*VM*N N TMFEVQPR*F+KC* LLHTKVRLHNFL LKA*N N +*G LRP QKE+MHIVKNGI+SE CSHGALL+MTWQ LKHWIHKPPALN++PVGLALK*SQY+TLL P*Y AVLLGVICAL GVTS+*NESVTSYG TKVN+A RK+LNLIK+HTMACL*I NLSEK+FKGH+VPT SL* ACLCHFA IIHFQ+ FN*IS*SPPG*NKG+E TFRPLH+AL+QK A SKS KH+CQFPRFDI*S*YP*+PWLGIIKF +TY+ S*AS*QTSLQLF P KAWKVSYLRSIH +EVKSRS HFSQ IHLYALRA+ NLLNM YMFI YVK S*HASARI+NL+ INVTL TNVE FE LSE+HHVQA TLAQFFK+VIC SAQIVK+I+ TS +R GNS HAAIQWGT LK+I*LQAQNST*RPL ISK PT+ I W D+DQPHMMPNAE*GYHLVLCISIVTKLLQNSLG*QSWIC GFTFNK TYA FQSKP+CAQQETH*VPKAVTI R+R+FVKVINVIISRGLNLTTK +F RP KGTFRPVDSQFA+R HRSPVRYYKYGAIFNFLNVEVPFE+LKRSQNLW IA IHC+CTFKD*Y*LLL PRHI*QL *ACTSCCKDNS+TL Subject 2927 EKHNF*PRITAQLFLSYAFILTNVDAETIKKIWLTWKQIPYHILPTLCSQEVVKWFPSEM*EETLHAHASDIYQVQVVAKA**GR*PPTIISME*VM*NQNSTMFEVQPR*FSKC*RKLLHTKVRLHNFLLLKA*N*NDV*GSLRPGQKEIMHIVKNGIISESCSHGALLEMTWQSGLKHWIHKPPALNVVPVGLALK*SQYITLLGP*YCAVLLGVICALAGVTSE*NESVTSYG*QTKVNIAWRKQLNLIKDHTMACL*ILNLSEKHFKGHDVPTLSL*LACLCHFAAIIHFQISFN*IS*SPPG*NKGYEFTFRPLHKALIQKTLASSKSPKHDCQFPRFDI*S*YP*KPWLGIIKFFVTYHAS*AS*QTSLQLFCPFKAWKVSYLRSIHREEVKSRSLHFSQFIHLYALRAVTNLLNMPYMFISYVKQS*HASARIDNLNLPINVTLSTNVERFESLSEIHHVQAATLAQFFKNVICRGSAQIVKNIYFTSTKR*GNSCDHAAIQWGTWLKVI*LQAQNST*RPLAISKLPTHFIFWSDNDQPHMMPNAE*GYHLVLCISIVTKLLQNSLG*QSWICKGFTFNKRTYAGFQSKPICAQQETH*VPKAVTIARYREFVKVINVIISRGLNLTTKKHFLRPRKGTFRPVDSQFAKRPHRSPVRYYKYGAIFNFLNVEVPFEHLKRSQNLWPIASIHCECTFKD*Y*LLLTPRHI*QLG*ACTSCCKDNSITL 5128
Range 3: 2929 to 5127 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1332.2 bits(2901) | 0.0 | 595/733(81%) | 0/733(0%) | Plus/Plus |
Query 5 V*PSCLCNNWCRLI*VARCA*EQEAINTSP*RCTCNGYQLWTKDFGIF*GIQRGLQH*EN*RWLHICNILQGSCEISWQIESPQDGMFLFRV*RSTTWLSN*GLC*L*H**L*QIFCXXXXXXXXXXSGFLVEHRRACFESWHTFIC*K*IHCRSSSVNPNCFEATW*QCLCRERDDSLILH*ASCEADHHHPRV*GKLEIWR**VAFMWNFVLAIKSFSTLCPIEWLHDNRYCLCARQT*GGCP*LSVQTFHKSHL*RIVPRWWPEHDVPR*GLRSIRHLCQV*H*WRNRGY*S*RTHVSFI*HNQ*TYKTC*EDWQWPAEHKGG*AERSETICS*PPFNEWIEDNLLSKL*EG*KAAGMFARRLNWCYK**EI**FQAMALRDINFKYQISGIDSCAWNFWSRQKLSVQELHEEV*R*VRDLCFTQEGSS*FN*KRPGNG*WLQSGKGRQIKERRLGRCDL*SISQKD*KSKGRPLCDF**GSAFSSWLR*PLSIDHKK*RFHFTCW*PLSKHI*LPKGPRDTRG*AK*HIEIT*GQVLQV*Y*EPEVCESNV*V*AAMSF*EGLHDCSVR*LCHFSQYA*LPSGSV*DLLRCHSGFKL*GKENCAVLLWYEATNTNIW*INGAELQTWWDFNFT*LIPY**S*VVNGPITL*SQFGLGKHYWCKRGGFPLTFCWETTLPLPDGEEWGECDKGLASR*AQLL*WLQR*HWAK*RSARGKALW*SLAKGHAF 2203 V* SCLCNNWCRLI VARCA*E EAINTSP*RCT NGY LW K FGIF*G+QRGLQH*EN*RWLHICNILQGSCE+SWQIESPQDGMFLF V* S +WLSN*GLC*L*H**L*QI C W W*LLLALSGFLVEHR ACFES HTF+C*K*I CRSSSVNPNCF ATW*QCLCRERDDSLILH*ASCE DH+H R+* +LE+WR* VAFMWNFVLAIKS ST+CPIEWLHD+ YCL A T* C *LSVQT +KSH *RIVPRW PEHDV R*G RS+RHLC V*H*W + GY S*RTHVS +*HN *TYK C*EDW PAEHKGG* E+SE ICS*PP +EWIEDNLLSKL*+G KAAGMFARRLNW K* +I**FQAMA RDINFKYQISGIDS AW+FWS Q+ SV EL+EEV*R*+R+LCFTQEGSS*FN*KR GNG*WLQSGKGRQ+KER LGR DL*S+SQKD*+SKGRPLCD **GSA SS L *PLS++H K*RFHFT W*PL KHI*LPKGPR+TRG AK*+IEIT*GQVLQV +*EPEVCESNV*V AMSF EGLHDCS R*LCHFSQYA* PSG V*D LR HS FKL*G+ENCAVLLWYEAT NIW INGAELQTWW+F+FT*LIPY**S*VVNGPITL* Q GLGK++W +RGGFPLTF WETTLPLPD +EWGECDKG ASR*A+ *W Q HW +*R RGKA+ *SL K +AF Subject 2929 V*SSCLCNNWCRLIQVARCA*E*EAINTSP*RCTRNGYWLWAKGFGIF*GVQRGLQH*EN*RWLHICNILQGSCEVSWQIESPQDGMFLFWV*GSASWLSN*GLC*L*H**L*QILCTWRW*LLLALSGFLVEHRWACFESRHTFVC*K*IPCRSSSVNPNCFAATW*QCLCRERDDSLILH*ASCEVDHYHSRI*SELEVWR*RVAFMWNFVLAIKSLSTMCPIEWLHDHSYCLSAW*T*SRCS*LSVQTLYKSHF*RIVPRWRPEHDVSR*GFRSVRHLC*V*H*WGD*GYQS*RTHVSSV*HN**TYKAC*EDW*RPAEHKGG*TEKSEAICS*PPLDEWIEDNLLSKL*KGRKAAGMFARRLNWRDK*RKI**FQAMAFRDINFKYQISGIDSRAWDFWSWQEFSV*ELYEEV*R*IRNLCFTQEGSS*FN*KRSGNG*WLQSGKGRQVKERGLGRRDL*SVSQKD*ESKGRPLCDL**GSAVSSRLC*PLSVNHTK*RFHFTRW*PLPKHI*LPKGPRNTRGRAK*YIEIT*GQVLQVQH*EPEVCESNV*VQTAMSFQEGLHDCSFR*LCHFSQYA*FPSGPV*DFLRRHSSFKL*GEENCAVLLWYEATYANIWRINGAELQTWWNFDFT*LIPY**S*VVNGPITL*PQLGLGKYHWRERGGFPLTFRWETTLPLPDCKEWGECDKGSASR*AKFF*WFQHQHW*E*RRTRGKAVR*SLVKSYAF 5127
Range 4: 2929 to 4368 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1049.0 bits(2283) | 0.0 | 467/480(97%) | 0/480(0%) | Minus/Minus |
Query 5 ITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRSFLIELARALLGETKVTNLPSDLFMKLLYRKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTSLSSSTFMLCGPLPIFSTCLICSLVMSNKADMRPLGLITSISPLMSHLAQMSNASKASARYIMFRPPPWHNSSKM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHKGHSLSPNFQLTSYSGVMMISLT*CLMQNKAIISFSA*ALSPSCFKTVWVDRAGSAMDSLSTNERMPAFKASPSVLNKKPTECQKQLPSPGTENLLKXXXXXXXXXSI*QPSSTSLDPEKEHSVLWTLNLPGDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKIFGP*LVSIASAPSRTSIDCFLLLGTSSNLDKPAPVVAKTTRSH 1444 ITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRS LIELARALLGETKVTNLPSDLF+KLLYRKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFT LSSSTFMLCGPLPIFSTCLICSLVMSN+ADMRPLGLITSISPLMSHLAQMSNASKASARYIMFRPPPWHNSSKM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGA G*K*FDCKHKIPHKGHSLSPNFQLTSYSGV+MI+LT*CLMQNKAIISFSA*ALSPSC KTVWVDRAGSA DSLSTNERMPAFKASPSVLNKKPTECQKQLPSPGTENLLKSSMS*SAEASI*QP STSLDPEKEHSVLWTLNLP DLTGAL*DITNMEPSSIFLMLKSPLNTSKDPK FGP* VSIASAPSRTSIDCFLLLGTSSNLDKPAPVVAKTTRSH Subject 2929 ITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRSLLIELARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTFLSSSTFMLCGPLPIFSTCLICSLVMSNRADMRPLGLITSISPLMSHLAQMSNASKASARYIMFRPPPWHNSSKM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAHG*K*FDCKHKIPHKGHSLSPNFQLTSYSGVIMINLT*CLMQNKAIISFSA*ALSPSCCKTVWVDRAGSARDSLSTNERMPAFKASPSVLNKKPTECQKQLPSPGTENLLKSSMS*SAEASI*QPRSTSLDPEKEHSVLWTLNLPRDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKTFGP*PVSIASAPSRTSIDCFLLLGTSSNLDKPAPVVAKTTRSH 4368
Range 5: 3903 to 5573 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
810.3 bits(1762) | 0.0 | 389/557(70%) | 0/557(0%) | Plus/Plus |
Query 979 WMS*EK*NDLLLTSFQ*MDRR*LTFQALRGLKSCRDVC*EA*LVL*VMRNLMIPSHGSQGYQLQISNLGN*QLCLELLEQAKAFCTRAS*RGLKVSS*PLFHPGGL*LIQLKKTWKWMMVAKWQRQANQREKVGTL*PLKYFSERLKI*RQAIV*FLMRFSFFLLATLTFVY*P*EVTLSFHLLVTPVKAHMTPKRTARY*GLSKVTY*DYLRASPTGIILRAGGL*IQCLSLGCHVILRRAP*LQRSLTMPFFTICMTSFWLGLRPP*MPFWFQALRKRKLCSLTLV*SN*H*HLVNQRG*TSNMVGF*FHMTHSILMIVGG*RPYHALVTIWTW*TLLV*AWRVSSHILLGNHFTTS*RRRVGRM**GTCFPVSPTSLMASTLALGEMKECERKSFVVILG*RSCFS*AKMRIARLRKLSLNARMRNGLKPISH*VIWNQQGPGGLERWH*RNTVK*DVVMKRLNSSLMNIGVEEASN*ATRVKDLKAYIQGIKVTIR*PSSWLSGNV*SFLSLKLKLQN*GAQSHTGSSY*TLSFLRFH*MQATMLT*CMKPYK 2649 WM+*EK*+DLLLTS +*MDRR*LTFQAL+G KSCRDVC*EA*L *V +NLMIPSHG QGYQLQISNLGN*Q CL LLE A+ FC RA *RGLKV+S*PLFHPGGL*LIQLK+ WKWMM AKWQRQA+QRE+VGT *PLK FSERL+I*RQAIV* LMRFS FL A LTFV *P EVTLSFH LVTP KAHMTPKRTA+Y*G SKV Y*DYLRASPTG LRAGGL*IQCLS CHVI RRAP*LQ SL MPFFTICM SFW GLR P* F FQALR+RKLCSLTLV*SN *HL NQRG*TSNMV F*FHMTHSILMIVGG*RPYHAL T WTW* L *AWRVSSHI LGNHFTTS* +RVGRM**G CF VS LM S L MK ERKS VILG*+ CFS* +M+ +L+ L L+ +M+NG K * IW+Q G GL +W *++TV+ DV M++L++S MN G ASN*A V L+A+I I+ P W SGN *S S + KL++*G QS G+S T S+ + H*+ AT+ M+ ++ Subject 3903 WMN*EK*SDLLLTSSR*MDRR*LTFQALKGQKSCRDVC*EA*LA**VTKNLMIPSHGFQGYQLQISNLGN*QSCLGLLELARVFCIRAL*RGLKVNS*PLFHPGGL*LIQLKEIWKWMMAAKWQRQASQRERVGTS*PLKCFSERLRI*RQAIV*SLMRFSCFLQAMLTFVC*PYEVTLSFHSLVTPAKAHMTPKRTAQY*GPSKVIY*DYLRASPTGTTLRAGGL*IQCLSPDCHVISRRAP*LQLSLIMPFFTICMISFWPGLRLP*TSF*FQALRRRKLCSLTLV*SNLR*HLENQRG*TSNMVEF*FHMTHSILMIVGG*RPYHALATTWTW*ISLA*AWRVSSHISLGNHFTTS*LQRVGRM**GICFQVSQIFLMVSASTLVRMKAYERKSCAVILG*KLCFS*DRMKTVKLKSLKLSVQMKNGSKHTYL*AIWSQPGLDGLGKWP*KSTVRYDVGMRQLSNSSMNTGGGWASN*AMLVNVLRAFILDIRAMTLSPF*WPSGNA*SSQSHRWKLRS*GVQSLMGNSCLTPSYQKSH*VLATIPICSMRQFR 5573
Range 6: 2928 to 4016 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
688.4 bits(1496) | 0.0 | 301/363(83%) | 0/363(0%) | Minus/Minus |
Query 4 ANIPAAFQPSQSLESKLSSIHSLKGGQEQIVSLLSAHPPLCSAGHCQSSQHVLYVHWLCQIKLTCVR*D**PRFLH*CHTWHKCRMLRRPQRGTSCSGHHLGTILQRCDLWKVCTDS*GHPPHVCRAQRQ*RLSCSHSMGHRVENDLIASTKFHIKATHYLQISNLPHTLG***SASHDA*CRIRLSSRSLHKHCHQVASKQFGLTELDLQWIHFQQMNVCQLSKQARLCSTRNPLSAKSSYHHQAQKIC*SHQCHNQQRPQFDNQVVLL*TLKRNIPSCGLSICQEISQEPCKILQIWSHLQFS*C*SPL*IPQKIPKSLVHSWYPLQVHLQGLVLIASCS*AHLAT*ISLHQLLQRQLGHT 1092 ANIPAAF P QSLESKLSSIHS +GGQEQI SL S HPPLCSAG QSSQH LYVH LCQ +LTCVR*D**P+ H*CHT HKCR LR+PQR TSCSG HLGTILQ+CDL +VCTDS* H HV +A RQ* SCSHSMGH VE+DLIASTKFHIKAT YLQ SN H L ***S SHDA*CRIRLSSRSLHKHCHQVA+KQFGLTELDLQ IHFQQ NVC+LSKQA LCSTRNPLSAKSSYH Q Q+IC*SHQCHNQQRPQFDNQ L *T KRNIPSCGLSICQE SQEPCKILQIWSHLQFS*C*SPL* PQKIPK L HS YPL+VHLQGLVLIAS S*AHLAT ISLHQLLQRQL HT Subject 2928 ANIPAAFLPFQSLESKLSSIHSSRGGQEQIASLFSVHPPLCSAGRYQSSQHALYVH*LCQTELTCVR*D**PQSPH*CHT*HKCRTLRKPQRDTSCSGRHLGTILQKCDL*RVCTDS*EHLLHVYQALRQ*L*SCSHSMGHMVESDLIASTKFHIKATRYLQTSNSLHILE***STSHDA*CRIRLSSRSLHKHCHQVAAKQFGLTELDLQGIHFQQTNVCRLSKQAHLCSTRNPLSAKSSYHRQVQRIC*SHQCHNQQRPQFDNQEALP*TQKRNIPSCGLSICQETSQEPCKILQIWSHLQFS*C*SPL*TPQKIPKPLAHSQYPLRVHLQGLVLIASYS*AHLATWISLHQLLQRQLDHT 4016
Range 7: 4059 to 5561 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
654.5 bits(1422) | 0.0 | 343/501(68%) | 0/501(0%) | Minus/Minus |
Query 1135 HASG*HCGLHSVEP*KGKCLVRTSRMALRASILQLQLEA*KTLDVS*QP*GRLPNRYLYALDICFQIFHTRCSIARFFHTYVHQRTVESFHNHISLHGVPSMPSFQPTWPLLIPDYLMGYGF*TIPHSSIQTQFPQPRNPHLGLRKA*PLAKDHHKAFPLALLHFAQC*R*SH*RSWAHREAXXXXXXXXXXXXXXGKVVSQQNVRGNPPRLHQ*CLPSPNCD*SVIGPLTTYDHQYGMSHVKLKSHHV*SSAPLIHQMLVLVASYQSKTAQFSFPQSLKPEWHLRRS*TEPEGSHAYCEKWHSQRTLQSWSPS*NDMAA*TQTLDSQTSGSQYYTCRTCPQVISICHFAQPLVSRGPFGSHMCFDRGHQQVK*KRHFLWSIDKGQRSQEEKAEPHQKSHNGLPLDFQSF*EILQRSQRXXXXXXXXXXXXXXNHHPFPGLF*LN*LEPSWVKQRSRTYLQTXXXXSCTESFCLLQKFQAQLSIPEI*YLKLISLRAMAWN 2637 H + +CG H + G+C S AL A QL A +T VS +P R + Y D C Q H CSIAR VH+R E H HI HG S P QP P L PD F*TI H + Q Q Q + H LRKA* L KDH AFPL LH QC* *+H*++ AH EA PLSHSPHS SGSGKVVSQ+NVRGNPPR Q* LPSP+C *SVIGPLTTYDHQYGMSHVK K HHV*SSAPLI QML VASYQSKTAQFS PQSLK E LR+S*T PEG+HAYCEKWH+QR LQSWSPS*NDMA TQTLDSQTSGSQ TCRTCPQVISI HFA+PLV RGPFGSHMCF RGHQ+VK*KRHF+W DKGQ S EE AEPHQ+SHNGLPLD QSF*E LQRS+RPN LSL CLPLPLC+HHPFP LF*LN*LEPSWVKQR R YLQTSS*SS TE+ C LQK QA+LSIPEI*YLKLISL+AMAWN Subject 4059 HGTYWYCG*HLMGLLIGRCQAGISHKALHALASQLPPVALRTSSVSGRPSKR**SHCPYV*DKCSQNVHKHCSIARPSPPCVHRRIAELSHTHIVPHGTLSRPFSQPI*PWLTPDCSKVCVF*TILHLNTQLQALQLHSLHPVLRKA*LLTKDHRTAFPLVRLHSYQC*C*NH*KNLAHLEADPLSHSPHSLQSGSGKVVSQRNVRGNPPRSRQ*YLPSPSCG*SVIGPLTTYDHQYGMSHVKSKFHHV*SSAPLILQMLA*VASYQSKTAQFSSPQSLKLE*RLRKS*TGPEGNHAYCEKWHNQRKLQSWSPS*NDMAVWTQTLDSQTSGSQCCTCRTCPQVISIYHFARPLVLRGPFGSHMCFGRGHQRVK*KRHFVWLTDKGQHSLEETAEPHQRSHNGLPLDSQSF*ETLQRSRRPNPLSLTCLPLPLCSHHPFPDLF*LN*LEPSWVKQRLRIYLQTSS*SSYTENSCQLQKSQARLSIPEI*YLKLISLKAMAWN 5561
Range 8: 4408 to 5133 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
525.7 bits(1141) | 0.0 | 227/242(94%) | 0/242(0%) | Minus/Minus |
Query 1484 PKKSMTFSQGSPQSFSSRTPSFRPMLTLKPLKKLGSPGSKSLITFSPLFAVRKW*SGFPAKCERKPSTLTPVMFTKSKL*LKRDRAVNHLRSSVWNESCEIKIPPCLKFSPVDSPNVSVSCFIPK*DCTIFFSSKLETRMASKEVLDRARRKSCIL*KMA*SANAAVMEPFLK*HGSLDSNIGFTNLRLSILYL*DLPSSNLNMSLCSAPSIARSFWESYVL*QGSPASEMKASLLMVNRQR 2209 PKKS+TF+QGSP SFSSRTPSF PML LKPLKK GSPGS+SLITFSPLFAVRKW*SGFPAKCERKPSTLTPV+FTKSKL LKRDRAVNHLRSSVWNESCEIKIPPCLKFSPVDSPNVSVSCFIPK*DCTIFFSSKLETRM SKEVLDRARRKSCIL*KMA*SA AAVMEPFLK*HGSLDSNIGFTNLRLS+LYL*DLPSSNLN+SLCSAPSIARSFWESYVL QGSPASEMKASL MVNRQR Subject 4408 PKKSITFNQGSPHSFSSRTPSFLPMLMLKPLKKFGSPGSRSLITFSPLFAVRKW*SGFPAKCERKPSTLTPVIFTKSKLWLKRDRAVNHLRSSVWNESCEIKIPPCLKFSPVDSPNVSVSCFIPK*DCTIFFSSKLETRMTSKEVLDRARRKSCIL*KMA*SAKAAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVLWQGSPASEMKASLRMVNRQR 5133
Range 9: 3162 to 3860 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
382.8 bits(829) | 0.0 | 192/233(82%) | 0/233(0%) | Plus/Plus |
Query 238 AN*ESTGRNVPFQGLEKYYLVVKLRPLLIMTLMTLTNFLCLVMVTAFGTQWVSC*AQTGLL*KLAYVHLLKVNPLQIQLCQPKLF*SNLVTMLMQRTR**PYSALGIM*G*SSSPQSMR*VGNLEIVSGLYVEFCACNQIIFNPVPH*MXXXXXXXXXRSADVRWMSLTICADLPQITSLKNCAKVVA*T*CTSLRPSKHSTFVPSVTLMEKSRLLILADACQLYLT*PMNI* 936 AN*ESTGRNVPF GL K +LVVKLRPLLIMTLMTLTN L L MVTAFGTQWVSC*AQ GLL*K AYV LLKVNPLQIQLCQPKLF SNLVTMLMQRTR**PYSALGIM*G*S S Q+M+*VG+LEI SGLYVEFCACNQI FN VPH*MAA* LLP R DV+ M LTICAD QIT LKNCAKV A*T*C SLR SK STFV SVTLM + RL ILADACQL LT* MNI* Subject 3162 AN*ESTGRNVPFLGLRKCFLVVKLRPLLIMTLMTLTNSLYLAMVTAFGTQWVSC*AQMGLL*KPAYVRLLKVNPLQIQLCQPKLFCSNLVTMLMQRTR**PYSALGIM*G*SLSLQNMK*VGSLEIASGLYVEFCACNQITFNHVPH*MAA*SQLLPQRLVDVK*MFLTICADPLQITFLKNCAKVAA*T*CISLRLSKRSTFVLSVTLMGRLRLSILADACQLCLT*LMNI* 3860
Range 10: 5189 to 5575 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
296.2 bits(640) | 0.0 | 120/129(93%) | 0/129(0%) | Plus/Plus |
Query 2265 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMHEAVQE 2651 WFKTHIPLSNLESTRARWVGKMALKE+REVRCGYETTQQFFDEHR G EQLSNACERFESIYPRHKGNDS+TFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPL+ASHN N+ HEAVQE Subject 5189 WFKTHIPLSNLESTRARWVGKMALKEYREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLSASHNTNMFHEAVQE 5575
Range 11: 5188 to 5568 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
212.8 bits(458) | 0.0 | 95/127(75%) | 0/127(0%) | Minus/Minus |
Query 2264 TASCIRLALWLAFSGTLERKVSSKNFPYGFARLNFAAST*GLENFRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNC*VVS*PHLTSRCSFNAIFPTHLALVDSRLLNGIWVLNH 2644 TAS L LWLA +GT +RKVSS+NFP GFARL+FAAST G ENF+RF TA++KV ESLPLCLG MLS S ALLNCS +P LCSSKNC*VVS PH TSR SF AIFPTHLALVDSRLL G+ VLNH Subject 5188 TASWNILVLWLALNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVIESLPLCLG*MLSKRSQALLNCSPIPPLCSSKNC*VVSYPHRTSRYSFKAIFPTHLALVDSRLLKGMCVLNH 5568
Range 12: 2928 to 3125 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
134.9 bits(288) | 0.0 | 59/66(89%) | 0/66(0%) | Plus/Plus |
Query 4 SVTELSLQQLVQAYLSC*MCLGARSNQY*SLKVHLQWIPAMDQRFWDLLRYSKGTSTLRKLKMAPY 201 SV ELSLQQLVQAY SC*MCLG RSNQY*SLKVH QWI AM QRFWDLLR SKGTSTLRKLKMAPY Subject 2928 SVIELSLQQLVQAYPSC*MCLGVRSNQY*SLKVHSQWILAMGQRFWDLLRCSKGTSTLRKLKMAPY 3125
Range 13: 5180 to 5560 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
116.5 bits(248) | 0.0 | 58/127(46%) | 0/127(0%) | Minus/Minus |
Query 2256 MHQVSIVACIQWNLRKESV**ELPVWLCAPQFCSFNLRLRKL*TFPDSHEEGYRIVTFMPWIYAFKSFTRVAQLLASSTPMFIKELLSRFITTSHFTVFLQCHLSNPPGPC*FQIT*WDMGFKPFLI 2636 M + IVA W+ E V E P+ LC P SF+L L +L FPD H++G R++ M I A K+FT +AQLLA P+FI+ELLS I TS+ TV Q H NP P * QI + F+PF I Subject 5180 MEHIGIVAST*WDF**EGVKQEFPIRLCTP*LRSFHLWL*ELQAFPDGHQKGDRVIALMSRINALKTFTSIAQLLAHPPPVFIEELLSCLIPTSYLTVLFQGHFPNPSSPG*LQIAQRYVCFEPFFI 5560
Range 14: 5170 to 5379 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
61.6 bits(128) | 0.0 | 31/70(44%) | 0/70(0%) | Plus/Plus |
Query 2246 *MLE*GMV*NPYPIK*SGINKGQVGWKDGIEGTP*SEMWL*NDSTVL**T*VWKKRAIEQRV*KI*KHIS 2455 *+ +* MV N + + SG+N+G +GW++G+E P* MW+*++S +L *T RAIEQ +* *+H+S Subject 5170 *VFK*RMVQNTHTFEQSGVNQG*MGWENGLERVP*GTMWV*DNSAILR*TQGGDGRAIEQCL*TF*EHLS 5379
Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome
Sequence ID: KR054734.1 Length: 8753 Number of Matches: 16
Range 1: 2926 to 5136 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1712.0 bits(3730) | 0.0 | 705/737(96%) | 0/737(0%) | Plus/Plus |
Query 3 QCDRVVFATTGAGLSKLLDVPRSKKQSILVLEGALAMDTSYGPKILGSFEVFKGDFNIKKIEDGSIFVISYRAPVRSPGKLRVHRTECSFSGSREVLLGCQIEASADYDIDDFNKFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESIADPALSTQTVLKQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMSALFDITNEHIRHVEKIGNGPQSIKVDELREVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGVSVEGFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQ 2213 QCDRVVFATTGAGLSKLLDVPRSKKQSI+VLEGALA+DTSYGPK+LGSFE+FKGDFNIKKIEDGSIFVISY+APVRS GKLRVH+TECSFSGS+EVLLGCQIEASADYDIDDFNKF VPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESES+ DP+LS QTVL+QL DNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINP GRMSALFDITNEHIRHVEKIGNGPQSIKVDELR+VKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTS+IKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK+DLEMDD CKVAKAGKSK+EGWDVVTFEVFLRKI NLKAGHCVIFDEVQLFPPGY+DLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGG+LISHDSFHTDDRRWLTALSRFSHNLDLVNITG+SVE FLSHFAGKPLYHFLTAKSGENVIRDLLPGEP F+NGF+++IG+NEGVREEKLCGDPWLKVMLFLGQ Subject 2926 QCDRVVFATTGAGLSKLLDVPRSKKQSIIVLEGALAIDTSYGPKVLGSFELFKGDFNIKKIEDGSIFVISYKAPVRSSGKLRVHKTECSFSGSKEVLLGCQIEASADYDIDDFNKFPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESLVDPSLSAQTVLRQLSDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPGGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSDIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKIANLKAGHCVIFDEVQLFPPGYIDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGVLISHDSFHTDDRRWLTALSRFSHNLDLVNITGISVESFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPIFYNGFSINIGKNEGVREEKLCGDPWLKVMLFLGQ 5136
Range 2: 2926 to 5127 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1199.3 bits(2611) | 0.0 | 528/734(72%) | 0/734(0%) | Minus/Minus |
Query 3 EKHDL*PRITTKLFLSHSFISPNANVEAIKEVGLTGKQVPYHILPTLRRQEVVKWFPSKM*EETLHAYTSNVYQVQIVTKA**GR*PPTIISME*VM*N*NPTMFEVQPR*FTKC*C*LLHTKVRLHNFLFLKA*NQNGI*GGLRPSQKEVMHIVKNGIVSERCSHGALLKMTWQPRLKHWIHKPPALNIIPVGLALK*SQYVTLLSP*YRAVLLGVICALTGVTSK*NESVTSYGQ*TKVNVARRKKLNLIKNHTMACL*IFNLSEKYFKGHNVPTFSL*FACLCHFATIIHFQVFFN*IS*SPPG*NKGHELTFRPLHEALVQKAFACSKSSKHNCQFPRFDI*S*YP*EPWLGIIKFLITYNTS*AS*QTSLQLFSPLKAWKVSYLRSIH*KEVKSRSFHFSQLIHLYALRAIANLLNMSYMFIGYVK*S*HASARINNLDFSINVTLGTNVECFEGLSEVHHVQATTLAQFFKDVICGRSAQIVKDIHLTSAERRGNSGYHAAIQWGTGLKMI*LQAQNST*RPLTISKFPTYLILWGDDDQPHMMPNAE*GYHLVLCISIVTKLLQNSLG*QSWICNGFTFNK*TYASFQSKPVCAQQETH*VPKAVTITRHRKFVKVINVIISRGLNLTTK*YFSRP*KGTFRPVDSQFARRSHRSPVRYYKYGAIFNFLNVEVPFEYLKRSQNLWSIAGIHCKCTFKD*Y*LLLAPRHI*QLR*ACTSCCKDNSVTL 2204 EKH+ P +TT+ FL H+FI N N E I E LT K +PYHILPT +EVVKWF SKM*++T HA SNV+QVQ+V KA *GR PPT+IS+E*VM*N NPTMFEV P *F K *C LLH KVRLHN L LKA*NQN I*GGLRPSQKEVMH+V++ I+S+ CSHGALL+MTWQ LKHWIHKPP LN++PVGL LK*SQY+TLLS Y A+LLGVICALTG+TSK NES+TSYG TKVN+A R++LNLIKN MACL + N +K+FKGHNVPTF *FA LCHFATIIHFQV FN*I *SP G*NKG+E FRPLH+ALVQKAF SK +KH+CQ RFDI S*Y *EPWLGI+K LITY+TS*A *QT LQLFSP K WKVSYL SIH*KEVKSRSFHFSQLIHLYALRA+ANLLNMS M +GYVK*S*HA AR+++L+ I++TL NV+CFE SE+HHVQ TTL Q FK VICG AQ+VK+IH TS ERRG+S HAAI WGT LKMI*LQA +ST RPL ISK PT+LI WG++DQPHMMPNA+*GYH VLCISI+T+L QN LG*Q WI FTFN+ TYA FQSKP+C QQETH*+PK VTITR+R+FVKVI+VIISRG +LTT *+F P KG R V+SQ ARRSHRS VRY++YGAIFNFLNV+VPFE LKRSQNLWSI G+ K FK+ Y*LLL PRHI*QL * CT CK+ SVTL Subject 2926 EKHNFKPWVTTQFFLPHTFIFANVNAETIVENWLTWK*IPYHILPTFCCKEVVKWFSSKM*KKTFHADASNVHQVQVVAKAR*GRQPPTVISVE*VM*NQNPTMFEV*PC*FAKS*CELLHAKVRLHNLLLLKA*NQNRI*GGLRPSQKEVMHVVEDCIISKCCSHGALLEMTWQSGLKHWIHKPPTLNVVPVGLTLK*SQYITLLSSQYCAILLGVICALTGITSKRNESITSYG*QTKVNIAWREQLNLIKNDAMACLQVCNFPKKHFKGHNVPTFFF*FASLCHFATIIHFQVSFN*IC*SPSG*NKGYEFAFRPLHKALVQKAFTSSKGAKHDCQLSRFDIRS*YS*EPWLGIVKLLITYHTS*AP*QTPLQLFSPFKTWKVSYL*SIH*KEVKSRSFHFSQLIHLYALRAVANLLNMSNMLVGYVK*S*HAPARVDDLNLPIDITLSANVKCFESFSEIHHVQTTTLTQLFKYVICGGPAQVVKNIHFTSTERRGDSCDHAAI*WGTRLKMI*LQA*DSTQRPLAISKLPTHLIFWGNNDQPHMMPNAK*GYHFVLCISIITELPQNGLG*QRWIYKRFTFNERTYACFQSKPICTQQETH*MPKTVTITRYREFVKVIDVIISRGFDLTT**HFLGPRKGALRLVNSQLARRSHRSLVRYHEYGAIFNFLNVKVPFEQLKRSQNLWSITGVDRKRAFKNYY*LLLTPRHI*QLG*TCTRRCKNYSVTL 5127
Range 3: 2928 to 4367 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
992.2 bits(2159) | 0.0 | 446/480(93%) | 0/480(0%) | Minus/Minus |
Query 5 ITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRSFLIELARALLGETKVTNLPSDLFMKLLYRKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTSLSSSTFMLCGPLPIFSTCLICSLVMSNKADMRPLGLITSISPLMSHLAQMSNASKASARYIMFRPPPWHNSSKM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHKGHSLSPNFQLTSYSGVMMISLT*CLMQNKAIISFSA*ALSPSCFKTVWVDRAGSAMDSLSTNERMPAFKASPSVLNKKPTECQKQLPSPGTENLLKXXXXXXXXXSI*QPSSTSLDPEKEHSVLWTLNLPGDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKIFGP*LVSIASAPSRTSIDCFLLLGTSSNLDKPAPVVAKTTRSH 1444 +TQWPAFRF+IFLRNTSKVTTSQPS FDLPAFATLQ SSIS+S LIE ARALLGETKVTNLPSDLF+KLLYRKLLPAPKVPSTTVNSRDLI EVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFT LSSSTFMLCGPLPIFSTCLICSLVMSN+ADMRP GL+TSISPL+SHLAQMSNASKASARYIMF+PPP H+SS M*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPH+GHSLSPNFQLTSYSGV+MISLT*CLMQNKAIISFSA*ALS SC KTVW D+ GS DSLST ERMPAFKASPSVLNKKPTECQKQLPSPGT NLLKSSMS*SAEASI*QPSSTSLDPEKEHSVL TLNLP DLTGAL*DITNMEPSSIFLMLKSPLN SKDPK FGP*LVSIASAPSRT IDCFLLLGTSSNLDKPAPVVAKTTRSH Subject 2928 MTQWPAFRFAIFLRNTSKVTTSQPSFFDLPAFATLQLSSISKSLLIEFARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLISEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTFLSSSTFMLCGPLPIFSTCLICSLVMSNRADMRPPGLMTSISPLISHLAQMSNASKASARYIMFKPPP*HSSSNM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHRGHSLSPNFQLTSYSGVIMISLT*CLMQNKAIISFSA*ALSLSCLKTVWADKDGSTRDSLSTKERMPAFKASPSVLNKKPTECQKQLPSPGTGNLLKSSMS*SAEASI*QPSSTSLDPEKEHSVL*TLNLPEDLTGAL*DITNMEPSSIFLMLKSPLNNSKDPKTFGP*LVSIASAPSRTIIDCFLLLGTSSNLDKPAPVVAKTTRSH 4367
Range 4: 3309 to 5126 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
956.9 bits(2082) | 0.0 | 431/606(71%) | 0/606(0%) | Plus/Plus |
Query 386 SGFLVEHRRACFESWHTFIC*K*IHCRSSSVNPNCFEATW*QCLCRERDDSLILH*ASCEADHHHPRV*GKLEIWR**VAFMWNFVLAIKSFSTLCPIEWLHDNRYCLCARQT*GGCP*LSVQTFHKSHL*RIVPRWWPEHDVPR*GLRSIRHLCQV*H*WRNRGY*S*RTHVSFI*HNQ*TYKTC*EDWQWPAEHKGG*AERSETICS*PPFNEWIEDNLLSKL*EG*KAAGMFARRLNWCYK**EI**FQAMALRDINFKYQISGIDSCAWNFWSRQKLSVQELHEEV*R*VRDLCFTQEGSS*FN*KRPGNG*WLQSGKGRQIKERRLGRCDL*SISQKD*KSKGRPLCDF**GSAFSSWLR*PLSIDHKK*RFHFTCW*PLSKHI*LPKGPRDTRG*AK*HIEIT*GQVLQV*Y*EPEVCESNV*V*AAMSF*EGLHDCSVR*LCHFSQYA*LPSGSV*DLLRCHSGFKL*GKENCAVLLWYEATNTNIW*INGAELQTWWDFNFT*LIPY**S*VVNGPITL*SQFGLGKHYWCKRGGFPLTFCWETTLPLPDGEEWGECDKGLASR*AQLL*WLQR*HWAK*RSARGKALW*SLAKGHAF 2203 SGFLVE+R ACFES HTF *K*I CRS V+PN FEA * CLCRER+DSLILH*ASCEADH++PR+*G+LE+WR* VA +WN +LA+KSFSTLCPI+WLHD+ Y LCAR T* GC *L VQ HKSH+*R V RWW EHDV R* RSI HL V*+ W + G+ R HVS I*HNQ Y TC*EDWQ PAEHKGG*AE+SETICS*PPFNEWI+DNLLSK *+G*KAAG+FAR LNWC K**E+* FQAMALR+INF YQIS +DS AW+ WS KLSVQEL+EEV*R +R+LCFTQ+GSS FN*KR GNG* LQSGKG QIK+RRLGRCDL*S+S ++ K +GRPL F**GS S L *PLS++H K* FHF+CW* LSKHI*LPKG R+T *A+*+IEIT*G VLQV +*E EVCESNV*V AMSF EGLHDCS+ *LC+ Q+A*LPSGSV*DLLRC GFKL*G+E+CAVLLW+EAT+TN W IN +LQTWW F+FT*LIP+** *VV+GPI L* Q GLG+HYW +RG F TFCW+TTLPLP ++WGECDKG SR*A L W Q *HW K*R GK +W* +A +AF Subject 3309 SGFLVEYRWACFESRHTFFR*K*ISCRSIFVSPNRFEAAQ**CLCRERNDSLILH*ASCEADHYYPRI*GELEVWR*RVASVWNLMLAVKSFSTLCPIKWLHDHSYRLCAR*T*SGCS*LPVQALHKSHI*RAVSRWWFEHDVSR*SFRSI*HLR*V*YQWGD*GHQPWRAHVSSI*HNQRAY*TC*EDWQRPAEHKGG*AEKSETICS*PPFNEWIKDNLLSKF*KG*KAAGVFARGLNWCDK**EV*RFQAMALRNINF*YQISRVDSRAWHLWSW*KLSVQELYEEV*RQIRNLCFTQKGSSKFN*KRLGNG**LQSGKGWQIKKRRLGRCDL*SVS*ENCKPEGRPLRHF**GSTVPSRLY*PLSVNHTK*CFHFSCW*SLSKHI*LPKGSRNTGS*AE*YIEIT*G*VLQVQH*ESEVCESNV*VQTAMSFQEGLHDCSIC*LCNLPQHA*LPSGSV*DLLRCDFGFKL*GEEDCAVLLWHEATHTNFWRINRVKLQTWWGFDFT*LIPH**P*VVDGPIAL*PQLGLGEHYWHQRGKFSFTFCWKTTLPLPYSKKWGECDKGSTSR*ANFLQWFQH*HWQK*RCEGGKTVW*PMA*SYAF 5126
Range 5: 3902 to 5482 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
740.6 bits(1610) | 0.0 | 359/527(68%) | 0/527(0%) | Plus/Plus |
Query 979 WMS*EK*NDLLLTSFQ*MDRR*LTFQALRGLKSCRDVC*EA*LVL*VMRNLMIPSHGSQGYQLQISNLGN*QLCLELLEQAKAFCTRAS*RGLKVSS*PLFHPGGL*LIQLKKTWKWMMVAKWQRQANQREKVGTL*PLKYFSERLKI*RQAIV*FLMRFSFFLLATLTFVY*P*EVTLSFHLLVTPVKAHMTPKRTARY*GLSKVTY*DYLRASPTGIILRAGGL*IQCLSLGCHVILRRAP*LQRSLTMPFFTICMTSFWLGLRPP*MPFWFQALRKRKLCSLTLV*SN*H*HLVNQRG*TSNMVGF*FHMTHSILMIVGG*RPYHALVTIWTW*TLLV*AWRVSSHILLGNHFTTS*RRRVGRM**GTCFPVSPTSLMASTLALGEMKECERKSFVVILG*RSCFS*AKMRIARLRKLSLNARMRNGLKPISH*VIWNQQGPGGLERWH*RNTVK*DVVMKRLNSSLMNIGVEEASN*ATRVKDLKAYIQGIKVTIR*PSSWLSGNV*SFLSLKLKLQN*GAQS 2559 WMS*EK*NDLLLTSFQ*MD+R*LTFQ L+GLKSCR VC* A*LV *VMR+L IPSHGSQ YQL ISNL +*Q CL LE KAFCTRA *RGLK +S*PLFHP GL* IQLK+TWKWM+VAKWQR ANQ++KVGTL*PLK F +L+ *RQAI FLMRF+ L A LTFV *P EV LSF LLV PVKAHMTPKR A+Y LS+V Y*DYLR SPTG LR GGL*IQCLS CHVI RRAP*LQ L M T CMTSFWLGLRPP*M FWFQALR+R+LCSLTL *SN H* L NQ+G*TSNMVGF*FHMTHS LM VGG*RPY AL T WTW*TLL AW+V HILL NHFTTS +++VGRM**G F VS S M S L L +MK RK+ VV G + CFS*A+M+I +L+ LSL+ +M+NG K * IW+Q G G +W *++TV+ M++L+SS MN ASN*A VKDLKA+ I+V I WLSG+V*SF S K +LQ+*GAQS Subject 3902 WMS*EK*NDLLLTSFQ*MDQR*LTFQVLKGLKSCRGVC*GA*LV**VMRSLTIPSHGSQEYQLLISNLES*QSCLAPLELVKAFCTRAL*RGLKANS*PLFHPEGL*QIQLKETWKWMIVAKWQRLANQKKKVGTL*PLKCFLGKLQT*RQAIASFLMRFNCSLQAILTFVC*PYEVMLSFLLLVIPVKAHMTPKRIAQYWELSRVIY*DYLRVSPTGTTLRVGGL*IQCLSPDCHVISRRAP*LQHLLIMQSSTTCMTSFWLGLRPP*MRFWFQALRRRRLCSLTLA*SNSH*LLANQQG*TSNMVGF*FHMTHSTLMTVGG*RPYRALATTWTW*TLLASAWKVFFHILLENHFTTSLQQKVGRM**GIYFQVSQFSTMVSALTLAKMKV*GRKNCVVTHGLKLCFS*ARMKIVKLKSLSLSVQMKNGSKHTYP*AIWSQPGLDGSGKWP*KSTVRCVAGMRQLSSSSMNTEGVWASN*AMLVKDLKAFTLDIRVMIPSLF*WLSGSV*SFQSHKWRLQS*GAQS 5482
Range 6: 2927 to 4015 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
604.5 bits(1313) | 0.0 | 265/363(73%) | 0/363(0%) | Minus/Minus |
Query 4 ANIPAAFQPSQSLESKLSSIHSLKGGQEQIVSLLSAHPPLCSAGHCQSSQHVLYVHWLCQIKLTCVR*D**PRFLH*CHTWHKCRMLRRPQRGTSCSGHHLGTILQRCDLWKVCTDS*GHPPHVCRAQRQ*RLSCSHSMGHRVENDLIASTKFHIKATHYLQISNLPHTLG***SASHDA*CRIRLSSRSLHKHCHQVASKQFGLTELDLQWIHFQQMNVCQLSKQARLCSTRNPLSAKSSYHHQAQKIC*SHQCHNQQRPQFDNQVVLL*TLKRNIPSCGLSICQEISQEPCKILQIWSHLQFS*C*SPL*IPQKIPKSLVHSWYPLQVHLQGLVLIASCS*AHLAT*ISLHQLLQRQLGHT 1092 AN PAAFQP Q+LESKLS IHSLKGGQEQIVSL SAHPPLCSAG CQSSQHV Y WLCQI+LTC R **P+ H* HT KC+MLR+ QR TSCS HHL T LQ CDLW+ CT S* HP HV RAQR+* SCSH MGH+VENDL AS +FH +AT YLQ SN PH LG***SASHDA*C+IRLS RSLHKH H ASK+FGLT++DLQ IHFQ+ NVC LSKQA L STRNPL+AK+SYHHQ Q IC*SH+CHNQQR +FDN V L T KR+ PSC LS CQ+ISQEPCKI +IWSHLQFS*C*SPL* QKIPK LVH+W Q LQ L+LIAS S*AHLAT I+LH LQ+ LGHT Subject 2927 ANTPAAFQPFQNLESKLSLIHSLKGGQEQIVSLFSAHPPLCSAGRCQSSQHV*YARWLCQIELTCARQG**PQSPH*YHT*RKCQMLRKLQRDTSCSNHHLDTALQICDLWRACTGS*EHPLHVYRAQRR*L*SCSHLMGHKVENDLTASIRFHTEATRYLQTSNSPHILG***SASHDA*CKIRLSFRSLHKHYH*AASKRFGLTKMDLQEIHFQRKNVCLLSKQAHLYSTRNPLNAKNSYHHQVQGIC*SHRCHNQQRLRFDNLVALPWTQKRSTPSCELSTCQKISQEPCKISRIWSHLQFS*C*SPL*TTQKIPKPLVHNWCRSQARLQELLLIASYS*AHLATWINLHPSLQKLLGHT 4015
Range 7: 4407 to 5135 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
503.3 bits(1092) | 0.0 | 217/243(89%) | 0/243(0%) | Minus/Minus |
Query 1484 WPKKSMTFSQGSPQSFSSRTPSFRPMLTLKPLKKLGSPGSKSLITFSPLFAVRKW*SGFPAKCERKPSTLTPVMFTKSKL*LKRDRAVNHLRSSVWNESCEIKIPPCLKFSPVDSPNVSVSCFIPK*DCTIFFSSKLETRMASKEVLDRARRKSCIL*KMA*SANAAVMEPFLK*HGSLDSNIGFTNLRLSILYL*DLPSSNLNMSLCSAPSIARSFWESYVL*QGSPASEMKASLLMVNRQR 2212 WPKKS+T S GSP SFSS TPSF PML LKPL K+GSPGS+SLITFSPLFAVRKW*SGFPAKCERK STL PVMFTKSKL LKRDRAVNHLRSSVWNESCEIK PPCLKF+PVDSP VSVSCF+PK*DCTIFFSSKLET++ASKEVLDRARRKSC+L K+A*SANAAVMEPFLK*HGSLDSNIGFTNLRLS+LYL*DLPSSNLN+SLCSAPSIARSFWESYVL*QGSPA EMKASL MVNRQR Subject 4407 WPKKSITLSHGSPHSFSSLTPSFLPMLMLKPL*KIGSPGSRSLITFSPLFAVRKW*SGFPAKCERKLSTLMPVMFTKSKLWLKRDRAVNHLRSSVWNESCEIKTPPCLKFNPVDSPKVSVSCFMPK*DCTIFFSSKLETKIASKEVLDRARRKSCMLWKIA*SANAAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVL*QGSPAREMKASLRMVNRQR 5135
Range 8: 4058 to 4969 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
429.0 bits(930) | 0.0 | 222/304(73%) | 0/304(0%) | Minus/Minus |
Query 1135 KVVSQQNVRGNPPRLHQ*CLPSPNCD*SVIGPLTTYDHQYGMSHVKLKSHHV*SSAPLIHQMLVLVASYQSKTAQFSFPQSLKPEWHLRRS*TEPEGSHAYCEKWHSQRTLQSWSPS*NDMAA*TQTLDSQTSGSQYYTCRTCPQVISICHFAQPLVSRGPFGSHMCFDRGHQQVK*KRHFLWSIDKGQRSQEEKAEPHQKSHNGLPLDFQSF*EILQRSQRXXXXXXXXXXXXXXNHHPFPGLF*LN*LEPSWVKQRSRTYLQTXXXXSCTESFCLLQKFQAQLSIPEI*YLKLISLRAMAWN 2046 KVV QQNV+ N PR Q*C PSP+C *S IGP TTY HQ GMSHVK K HHV*S LI Q LV VAS QSKTAQ S PQSLKP+ HLRRS*TEPEGSHA C + H+Q+ LQSWSPS*NDMA TQTLDSQTS SQ TCRT PQVISI H AQ V R PFGSHMCFDR HQQ K*K HF+W DKGQ S E EPHQK NGLP Q *E LQRSQRPNLL LIC PLPLCN+HPFP LF*LN LEP WVKQR R LQTSS*SSCTESF LQ+ QA+LS EI*Y KLI LRAMAWN Subject 4058 KVVFQQNVKENFPR*CQ*CSPSPSCG*SAIGPSTTYGHQCGMSHVKSKPHHV*SLTLLIRQKLV*VASCQSKTAQSSSPQSLKPKSHLRRS*TEPEGSHACCGRLHNQQMLQSWSPS*NDMAVWTQTLDSQTSDSQCCTCRTYPQVISIYHSAQLPVLRDPFGSHMCFDRDHQQEK*KHHFVWLTDKGQYSLEGTVEPHQK*RNGLPSGLQFS*ETLQRSQRPNLLFLICQPLPLCNYHPFPSLF*LNLLEPFWVKQRLRICLQTSS*SSCTESFYQLQRCQARLSTLEI*YQKLIFLRAMAWN 4969
Range 9: 3161 to 3862 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
306.7 bits(663) | 0.0 | 161/234(69%) | 0/234(0%) | Plus/Plus |
Query 238 AN*ESTGRNVPFQGLEKYYLVVKLRPLLIMTLMTLTNFLCLVMVTAFGTQWVSC*AQTGLL*KLAYVHLLKVNPLQIQLCQPKLF*SNLVTMLMQRTR**PYSALGIM*G*SSSPQSMR*VGNLEIVSGLYVEFCACNQIIFNPVPH*MXXXXXXXXXRSADVRWMSLTICADLPQITSLKNCAKVVA*T*CTSLRPSKHSTFVPSVTLMEKSRLLILADACQLYLT*PMNI*D 939 A+*E T R+ PF G K Y VVK +PLLIMT MTLTN L LVMVT FG QWVSC* Q GLL*K AYV LKVN L I LCQPK F* + V MLMQRT+**PY ALGIM*G*S PQ+MR*VG+LEI SGL VE AC+QIIFN VPH*MAA* L PLRS DV+WM LT CA PQIT LK+C KVV *T*C SL+ SKH TF SV M + R LA ACQLYLT*P +I D Subject 3161 AS*EFTRRSAPFLGPRKCY*VVKSKPLLIMTSMTLTNSLYLVMVTVFGIQWVSC*VQMGLL*KQAYVLSLKVNLL*IHLCQPKPF*GSSVIMLMQRTK**PYFALGIM*G*SLLPQNMR*VGSLEIASGLCVESYACSQIIFNLVPH*MAA*SQLSPLRSVDVKWMFLTTCAGPPQITYLKSCVKVVV*T*CISLKLSKHLTFALSVISMGRLRSSTLAGACQLYLT*PTSILD 3862
Range 10: 5188 to 5574 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
298.0 bits(644) | 0.0 | 121/129(94%) | 0/129(0%) | Plus/Plus |
Query 2265 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMHEAVQE 2651 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHR G EQLSNACERFESIYPRHKGNDS+TFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHN N+ +EAVQE Subject 5188 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVNMFNEAVQE 5574
Range 11: 5187 to 5567 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
219.2 bits(472) | 0.0 | 96/127(76%) | 0/127(0%) | Minus/Minus |
Query 2264 TASCIRLALWLAFSGTLERKVSSKNFPYGFARLNFAAST*GLENFRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNC*VVS*PHLTSRCSFNAIFPTHLALVDSRLLNGIWVLNH 2644 TAS L LWLAF+GT ++ VSS+NFP GFARL+FAAST G ENF+RF TA++KV ESLPLCLG MLSNLS ALLNCS +P LCSSKNC*VVS P TSRCSF AIFPTHLALVDSRLL G+ VLNH Subject 5187 TASLNILTLWLAFNGTFDKNVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSNLSQALLNCSPIPPLCSSKNC*VVSYPQRTSRCSFKAIFPTHLALVDSRLLKGMCVLNH 5567
Range 12: 2928 to 3278 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
173.8 bits(373) | 0.0 | 83/117(71%) | 0/117(0%) | Plus/Plus |
Query 5 V*PSCLCNNWCRLI*VARCA*EQEAINTSP*RCTCNGYQLWTKDFGIF*GIQRGLQH*EN*RWLHICNILQGSCEISWQIESPQDGMFLFRV*RSTTWLSN*GLC*L*H**L*QIFC 355 V*PS CN+ CR I VARCA*E EAIN S *R C+ +QLWTK FGIF* +QRGL H*EN*RWLHI +ILQGSCEI WQ+ES QDG+ LF V S T LSN LC*L*H *L*QI C Subject 2928 V*PSSFCNDGCRFIQVARCA*E*EAINNSS*RRACDRHQLWTKGFGIF*VVQRGL*H*EN*RWLHIRDILQGSCEIFWQVESSQDGVLLFWVQGSATRLSNRSLC*L*HR*L*QIPC 3278
Range 13: 5018 to 5560 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
149.1 bits(319) | 0.0 | 85/181(47%) | 0/181(0%) | Minus/Minus |
Query 2095 HASG*HCGLHSVEP*KGKCLVRTSRMALRASILQLQLEA*KTLDVS*QP*GRLPNRYLYALDICFQIFHTRCSIARFFHTYVHQRTVESFHNHISLHGVPSMPSFQPTWPLLIPDYLMGYGF*TIPHSSIQTQFPQPRNPHLGLRKA*PLAKDHHKAFPLALLHFAQC*R*SH*RSWAHRE 2637 H + *HCG HS+E C ALRA LQ L A KTL+ S QP + N Y Y CFQIFH C IAR + VH+RT E H + HG S P +P P L PD F*TI H + QTQ Q N H GLRKA* A HH FP + LHF QC* *+H R AH E Subject 5018 H*TY*HCG*HSMELLTKMCQAEIFHKALRALALQPPLVALKTLNASGQPLKK*WNHYPYV*GKCFQIFHKHCLIARPYPLCVHRRTAELSHTRNAPHGALSRPFSRPI*PWLTPDCSRVCVF*TILHLNTQTQALQLHNLHPGLRKA*L*AMGHHTVFPPSHLHFCQC*C*NHCRKLAHLE 5560
Range 14: 5179 to 5559 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
116.1 bits(247) | 0.0 | 58/127(46%) | 0/127(0%) | Minus/Minus |
Query 2256 MHQVSIVACIQWNLRKESV**ELPVWLCAPQFCSFNLRLRKL*TFPDSHEEGYRIVTFMPWIYAFKSFTRVAQLLASSTPMFIKELLSRFITTSHFTVFLQCHLSNPPGPC*FQIT*WDMGFKPFLI 2636 + + IVA IQWN ++ V + + LCAP CS +L L KL*T PDSH + I+T M + AFKSFT +A LLA + +FI+ELLS I +H TV Q H +P P * QI + F+PF I Subject 5179 IEHIDIVASIQWNF*QKCVKQKFSIRLCAP*LCSLHLWL*KL*TLPDSH*KSDGIITLMSRVNAFKSFTSIA*LLAHTPSVFIEELLSCLIPATHLTVLFQGHFPDPSSPG*LQIAQGYVCFEPFFI 5559
Range 15: 2927 to 3124 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
104.2 bits(221) | 0.0 | 48/66(73%) | 0/66(0%) | Plus/Plus |
Query 4 SVTELSLQQLVQAYLSC*MCLGARSNQY*SLKVHLQWIPAMDQRFWDLLRYSKGTSTLRKLKMAPY 201 SVTE LQ+ VQ Y SC*MCLG RSNQ * LK L+ P MDQRFWDLL SKGT TLRKLKMAPY Subject 2927 SVTE*FLQRRVQVYPSC*MCLGVRSNQ**FLKARLRSTPVMDQRFWDLLSCSKGTLTLRKLKMAPY 3124
Range 16: 5163 to 5546 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
93.6 bits(198) | 0.0 | 56/128(44%) | 0/128(0%) | Plus/Plus |
Query 2240 *V*MLE*GMV*NPYPIK*SGINKGQVGWKDGIEGTP*SEMWL*NDSTVL**T*VWKKRAIEQRV*KI*KHISKA*R*RFGNLPHGCQETSKVF*ASS*SCKIEARKAIREVLTRHFPF*GSTECKPQC 2623 *V*+ +* MV N + ++ SG+N+G +G ++G+E P* + +*++S VL *T RAI+Q +*KI*KH+ * * F + +GC E KVF A+S CK +ARKA+ ++ H S EC PQC Subject 5163 *V*VFK*RMVQNTHTLEQSGVNQG*MGRENGLERAP*GALRV*DNSAVLR*TQRGYGRAIKQCL*KI*KHLP*T*G**FHHFFNGCPEAFKVFKATSGGCKAKARKALWKISA*HIFVKSSIEC*PQC 5546
Rupestris stem pitting associated virus isolate RSPaV PN, complete genome
Sequence ID: AY368172.2 Length: 8743 Number of Matches: 14
Range 1: 2926 to 5136 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1657.5 bits(3611) | 0.0 | 685/737(93%) | 0/737(0%) | Plus/Plus |
Query 3 QCDRVVFATTGAGLSKLLDVPRSKKQSILVLEGALAMDTSYGPKILGSFEVFKGDFNIKKIEDGSIFVISYRAPVRSPGKLRVHRTECSFSGSREVLLGCQIEASADYDIDDFNKFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESIADPALSTQTVLKQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMSALFDITNEHIRHVEKIGNGPQSIKVDELREVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKTSLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKHGGILISHDSFHTDDRRWLTALSRFSHNLDLVNITGVSVEGFLSHFAGKPLYHFLTAKSGENVIRDLLPGEPNFFNGFNVSIGRNEGVREEKLCGDPWLKVMLFLGQ 2213 QCD+VVFATTGAGLSKLLD+PRSKKQSILVLEGAL MDTSYGPK+LGSFEVFKGDF++KKIEDGSIFVISYRAPVRSPGKLRVH+TECSFSGSREVLLGCQIEASADYDIDDFNKFSVP DGNCFWHSVGFLLSTDGLALKAGIRSFVESES+AD +LS+ VLKQLG++AYAENEMIALFCIRH VRLIIITPEYEVSWKFG+SEWPLCGILCL+SNHFQPCAPLNGCMITAIA+ALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIE+INP GR+SALFDITNEHI HVEKIG GPQSIKVDELR+VKRSALDLLSMNGS+ITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLS IST +IK RELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK+DLEMDD CKVAKAGKSK+EGWDVVTFEVFLRKI +LKAGHCVIFDEVQLFPPGY+DLCLLTIR+DAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEG+SY+YNIESRRFVNPMFE RLPCHFKKGSMTAAFADYAIFHNMHDFLLARSK+ LDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFK+GGILISHDSFH DDRRWLTALSRFSHNLDLVNITGVSVE FLS FAGKPLYHFLTAKSGENVIRDLLPGEP FFNGF+++IGRNEGVREEKL GDPWLKVMLFLGQ Subject 2926 QCDKVVFATTGAGLSKLLDMPRSKKQSILVLEGALEMDTSYGPKVLGSFEVFKGDFSLKKIEDGSIFVISYRAPVRSPGKLRVHKTECSFSGSREVLLGCQIEASADYDIDDFNKFSVPRDGNCFWHSVGFLLSTDGLALKAGIRSFVESESLADSSLSSPAVLKQLGEDAYAENEMIALFCIRHQVRLIIITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIAAALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEIINPGGRISALFDITNEHIMHVEKIGTGPQSIKVDELRKVKRSALDLLSMNGSRITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSSISTVDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKIASLKAGHCVIFDEVQLFPPGYIDLCLLTIRNDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGRSYKYNIESRRFVNPMFECRLPCHFKKGSMTAAFADYAIFHNMHDFLLARSKSPLDAILVSSFEEKKIVQSYFGMKQLTLTFGESTGLNFKNGGILISHDSFHADDRRWLTALSRFSHNLDLVNITGVSVESFLSQFAGKPLYHFLTAKSGENVIRDLLPGEPIFFNGFSINIGRNEGVREEKLYGDPWLKVMLFLGQ 5136
Range 2: 2926 to 5127 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
993.5 bits(2162) | 0.0 | 444/734(60%) | 0/734(0%) | Minus/Minus |
Query 3 EKHDL*PRITTKLFLSHSFISPNANVEAIKEVGLTGKQVPYHILPTLRRQEVVKWFPSKM*EETLHAYTSNVYQVQIVTKA**GR*PPTIISME*VM*N*NPTMFEVQPR*FTKC*C*LLHTKVRLHNFLFLKA*NQNGI*GGLRPSQKEVMHIVKNGIVSERCSHGALLKMTWQPRLKHWIHKPPALNIIPVGLALK*SQYVTLLSP*YRAVLLGVICALTGVTSK*NESVTSYGQ*TKVNVARRKKLNLIKNHTMACL*IFNLSEKYFKGHNVPTFSL*FACLCHFATIIHFQVFFN*IS*SPPG*NKGHELTFRPLHEALVQKAFACSKSSKHNCQFPRFDI*S*YP*EPWLGIIKFLITYNTS*AS*QTSLQLFSPLKAWKVSYLRSIH*KEVKSRSFHFSQLIHLYALRAIANLLNMSYMFIGYVK*S*HASARINNLDFSINVTLGTNVECFEGLSEVHHVQATTLAQFFKDVICGRSAQIVKDIHLTSAERRGNSGYHAAIQWGTGLKMI*LQAQNST*RPLTISKFPTYLILWGDDDQPHMMPNAE*GYHLVLCISIVTKLLQNSLG*QSWICNGFTFNK*TYASFQSKPVCAQQETH*VPKAVTITRHRKFVKVINVIISRGLNLTTK*YFSRP*KGTFRPVDSQFARRSHRSPVRYYKYGAIFNFLNVEVPFEYLKRSQNLWSIAGIHCKCTFKD*Y*LLLAPRHI*QLR*ACTSCCKDNSVTL 2204 ++H+ PR+T +LFL ++FIS N N E IKE LT KQ+PYHIL L EVVKWFPSK+ ++T H YTSN+YQV I+TKA* PP II +E*VM*N*NP + E+ * KC C LLH +V L++ L KA*NQNGI*G LRPS +EVMH+V+NGI+ + CSHGALL+MTWQ KHWI KPPALN+I V A K SQY+TL SP Y A+LLGV+CAL GVT K*N+ + Y Q T++NVARR+ LNLIKN+TM C * NL E+ KG+N+PTF L* A LCH ATIIHFQV FN +S*S PG NK H+ TFR LHE LVQ+ FAC KS+KHNC F DI S*Y *EPWL IIKF ITY+TS*A Q LQLFSP K W+VSY IH*KEVKS FHFSQL+HLYALR NL NM Y+FIGYVK* *+AS RI + +F I++T N+ECFEGLS VHH++AT+L F++VICG A +VK+IHLTS +R N HAA+QWGT L+MI* QAQN+ RPL K PTY I GD++QPH++PN + GYHL+LCISI TKLL N Q I G TFNK Y SF S+P+ A QETH VP+A+ +T +RKF++VINVIISR +L TK +F K TFR VDSQF R SHR +RY+KY IFN L +V F+ LKR Q+LW + IH KCTFKD *L L RHI + ACTS CK++ + L Subject 2926 KEHNFQPRVTIQLFLPNTFISSNINAETIKENWLTRKQIPYHILSALCC*EVVKWFPSKLGQKTFHTYTSNIYQV*IMTKA*QSCQPPAIIGVE*VM*N*NPAILEI*AS*LAKCKCELLHAEVGLYDLLLFKA*NQNGI*GRLRPS*EEVMHVVENGIIGKCCSHGALLEMTWQSAFKHWIDKPPALNVILVRSAFKQSQYITLFSPQYCAILLGVVCALAGVTGK*NKGIIPYCQQTQINVARRE*LNLIKNYTMTCF*ACNLPEEDLKGYNIPTFLL*LASLCHLATIIHFQVSFNGVS*SSPGRNKSHKFTFRSLHETLVQETFACPKSAKHNC*FSGLDIHS*YT*EPWL*IIKFFITYHTS*APQQAPLQLFSPFKTWEVSYP*PIH*KEVKS*PFHFSQLVHLYALRTGTNLFNMHYVFIGYVK*G*YASTRIYDFNFPIDITFSANIECFEGLS*VHHIEATSLT*LFENVICGGPA*VVKNIHLTSTKRGSNGCDHAAVQWGTRLEMI*FQAQNAAQRPLAFPKLPTYFIFRGDNNQPHLVPNTKQGYHLILCISIFTKLL*NCWRGQR*IRKGLTFNKRPYTSF*SEPIRA*QETHRVPEAIAVTGYRKFIEVINVIISRSFDLATKQHFPGSRKRTFRFVDSQFTRGSHRGSIRYHKYRTIFNLLEAKVSFKNLKRPQDLWPVTCIHLKCTFKDEN*LFLTSRHIQKFGQACTSGCKNDLIAL 5127
Range 3: 2928 to 4367 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
908.8 bits(1977) | 0.0 | 410/480(85%) | 0/480(0%) | Minus/Minus |
Query 5 ITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRSFLIELARALLGETKVTNLPSDLFMKLLYRKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTSLSSSTFMLCGPLPIFSTCLICSLVMSNKADMRPLGLITSISPLMSHLAQMSNASKASARYIMFRPPPWHNSSKM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHKGHSLSPNFQLTSYSGVMMISLT*CLMQNKAIISFSA*ALSPSCFKTVWVDRAGSAMDSLSTNERMPAFKASPSVLNKKPTECQKQLPSPGTENLLKXXXXXXXXXSI*QPSSTSLDPEKEHSVLWTLNLPGDLTGAL*DITNMEPSSIFLMLKSPLNTSKDPKIFGP*LVSIASAPSRTSIDCFLLLGTSSNLDKPAPVVAKTTRSH 1444 ITQ PAF+ +IFLR TSKVTTSQPS FDLPAFATLQ SSIS+S L+ELARALLGETKVTNLPSDLFMKLLY+KLLPAPKVPSTTVNSR LI VDI ESHG ESLNFSSLITPV+PP+KHPC+FSALSKLGK*VI DPFIERRSRAD FT LSSSTFMLCGP+PIFSTC++CSLVMSNKADMRP G + SISPL+SHLAQ+SNASKASARYI+ RPPP H+SSKM*FVEGLHR*LRTSTSRLPSA A+AVIMQPFNGAQG K*FD KH++PHKGHSLSPNFQLTSYSGV++I+LT CL+QNKAIISFSA*A SPSCFKT D+ SA DSLST +R+PAFKASPSVLN+KPTECQKQLPS GTENLLKSSMS*SAEASI QPSSTSLDPEKEHSVLWTLNLPGDLTGAL*DITN+EPSSIFL LKSPL TSKDPK FGP*LVSI+SAPSRT IDCFLLLG S +LDKPAPVVAKTT SH Subject 2928 ITQ*PAFKLAIFLRKTSKVTTSQPSFFDLPAFATLQLSSISKSLLMELARALLGETKVTNLPSDLFMKLLYKKLLPAPKVPSTTVNSRGLISTVDILESHGFESLNFSSLITPVRPPNKHPCNFSALSKLGK*VILDPFIERRSRADLFTFLSSSTFMLCGPVPIFSTCIMCSLVMSNKADMRPPGFMISISPLISHLAQISNASKASARYIILRPPP*HSSSKM*FVEGLHR*LRTSTSRLPSAAAMAVIMQPFNGAQGWK*FDFKHRMPHKGHSLSPNFQLTSYSGVIIINLTWCLIQNKAIISFSA*ASSPSCFKTAGEDKDESARDSLSTKDRIPAFKASPSVLNRKPTECQKQLPSRGTENLLKSSMS*SAEASIWQPSSTSLDPEKEHSVLWTLNLPGDLTGAL*DITNIEPSSIFLRLKSPLKTSKDPKTFGP*LVSISSAPSRTRIDCFLLLGISRSLDKPAPVVAKTTLSH 4367
Range 4: 4407 to 5132 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
471.6 bits(1023) | 0.0 | 204/242(84%) | 0/242(0%) | Minus/Minus |
Query 1484 PKKSMTFSQGSPQSFSSRTPSFRPMLTLKPLKKLGSPGSKSLITFSPLFAVRKW*SGFPAKCERKPSTLTPVMFTKSKL*LKRDRAVNHLRSSVWNESCEIKIPPCLKFSPVDSPNVSVSCFIPK*DCTIFFSSKLETRMASKEVLDRARRKSCIL*KMA*SANAAVMEPFLK*HGSLDSNIGFTNLRLSILYL*DLPSSNLNMSLCSAPSIARSFWESYVL*QGSPASEMKASLLMVNRQR 2209 PKKS+TF+QGSP +FSSRTPSF P+L LKPLKK+GSPGS+SLITFSPLFAVRKW*SGFPA +RK STLTPV+FTKSKL*LKRD+AVNHLRSS WNESCEIKIPP LKF PVDSPNVSVSCF+PK*DCTIFFSSKLET+MASK LDRARRKSC+L KMA*SANAAVMEPFLK*HGSL SNIG TNL LS+LYL*DLPSSNLN+SLCSAP+IARSFWESYVL QGSPASE+KAS +V++ R Subject 4407 PKKSITFNQGSPYNFSSRTPSFLPILMLKPLKKIGSPGSRSLITFSPLFAVRKW*SGFPANWDRKLSTLTPVIFTKSKL*LKRDKAVNHLRSSAWNESCEIKIPPFLKFKPVDSPNVSVSCFMPK*DCTIFFSSKLETKMASKGDLDRARRKSCMLWKMA*SANAAVMEPFLK*HGSLHSNIGLTNLLLSMLYL*DLPSSNLNISLCSAPNIARSFWESYVLWQGSPASEIKASFRIVSKHR 5132
Range 5: 5188 to 5574 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
292.5 bits(632) | 0.0 | 119/129(92%) | 0/129(0%) | Plus/Plus |
Query 2265 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMHEAVQE 2651 WFKTHIPLSNLESTRARWVGKMALKE+RE RCGYETTQQFFDEHR G EQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLD FLSKVPLNA HN N+ HEAVQE Subject 5188 WFKTHIPLSNLESTRARWVGKMALKENREARCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDAFLSKVPLNAGHNVNMFHEAVQE 5574
Range 6: 5187 to 5567 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
210.0 bits(452) | 0.0 | 93/127(73%) | 0/127(0%) | Minus/Minus |
Query 2264 TASCIRLALWLAFSGTLERKVSSKNFPYGFARLNFAAST*GLENFRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNC*VVS*PHLTSRCSFNAIFPTHLALVDSRLLNGIWVLNH 2644 TAS L LW AF GT ++ SSKNFP GFARLNFAAST GLENF+RF TA++ VTES PLCLG MLSNLS ALLNCS +P LCSSKNC VVS PHL SR SF AI PTHLALVDS+LL G+ VLNH Subject 5187 TAS*NMLTLWPAFKGTFDKNASSKNFP*GFARLNFAASTCGLENFKRFRTAIKNVTESFPLCLG*MLSNLSQALLNCSPIPPLCSSKNCWVVSYPHLASRFSFKAILPTHLALVDSKLLKGMCVLNH 5567
Range 7: 5179 to 5559 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
134.9 bits(288) | 0.0 | 63/127(50%) | 0/127(0%) | Minus/Minus |
Query 2256 MHQVSIVACIQWNLRKESV**ELPVWLCAPQFCSFNLRLRKL*TFPDSHEEGYRIVTFMPWIYAFKSFTRVAQLLASSTPMFIKELLSRFITTSHFTVFLQCHLSNPPGPC*FQIT*WDMGFKPFLI 2636 M V IVA IQ L +E V + + C PQ C FNL LRK *T D H+E RI++ MP + A KSFT +AQLLA ++P+ IKELL I T T+F Q H ++PP C*FQ+ * + FKPF I Subject 5179 MKHVDIVASIQRYL*QECVKQKFSIRFCTPQLCRFNLWLRKF*TLSDCHQECDRIISLMPRVNALKSFTSIAQLLAHTSPVLIKELLGCLIPTPCLTIFFQSHFADPPSSC*FQVA*GYVCFKPFFI 5559
Range 8: 2946 to 5123 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
880.8 bits(1916) | 0.0 | 422/726(58%) | 0/726(0%) | Plus/Plus |
Query 23 CNNWCRLI*VARCA*EQEAINTSP*RCTCNGYQLWTKDFGIF*GIQRGLQH*EN*RWLHICNILQGSCEISWQIESPQDGMFLFRV*RSTTWLSN*GLC*L*H**L*QIFCXXXXXXXXXXSGFLVEHRRACFESWHTFIC*K*IHCRSSSVNPNCFEATW*QCLCRERDDSLILH*ASCEADHHHPRV*GKLEIWR**VAFMWNFVLAIKSFSTLCPIEWLHDNRYCLCARQT*GGCP*LSVQTFHKSHL*RIVPRWWPEHDVPR*GLRSIRHLCQV*H*WRNRGY*S*RTHVSFI*HNQ*TYKTC*EDWQWPAEHKGG*AERSETICS*PPFNEWIEDNLLSKL*EG*KAAGMFARRLNWCYK**EI**FQAMALRDINFKYQISGIDSCAWNFWSRQKLSVQELHEEV*R*VRDLCFTQEGSS*FN*KRPGNG*WLQSGKGRQIKERRLGRCDL*SISQKD*KSKGRPLCDF**GSAFSSWLR*PLSIDHKK*RFHFTCW*PLSKHI*LPKGPRDTRG*AK*HIEIT*GQVLQV*Y*EPEVCESNV*V*AAMSF*EGLHDCSVR*LCHFSQYA*LPSGSV*DLLRCHSGFKL*GKENCAVLLWYEATNTNIW*INGAELQTWWDFNFT*LIPY**S*VVNGPITL*SQFGLGKHYWCKRGGFPLTFCWETTLPLPDGEEWGECDKGLASR*AQLL*WLQR*HWAK*RSARGKALW*SLAKGHA 2200 CN+WCRL+ + A*+ E IN+ P*RCT +GY+L K G+F*G R L E+*RW +IC+IL CEI IESPQ+GMF F + S WL N C*L*H**L IFC * LLLAL GF V+H A F+SW+T C*K*+ C V + F+ATW*+CLCRE DDSL+L+*A E D++HP +* KLE+W VAF+ + VL IKSF TLCPIE LHD+ +C A T*GGC *L +Q HKSH R + WP++DVP *GLRSIR+L +*+ W N + S TH+S I*HNQ*T+ C*+DW A+HKGG AE+SE + S*PPFNEW++DNLL K *+G*K A + NWC K**+I**F+AMAL+ IN YQ I+SCAW+FW RQK VQE HEE+*R*+ D CF QE SS* +*KR GNG* LQ GKG Q+KE RLG C+L* + Q+D K K R LC+F**GS SWL * + D+ +* +FTC *PL KHI LP+G R+ G* K*+IEI * Q+LQV*+*E EVC+SNV*+ AMSF EGLHDCS+ LCHF Q+A*LP SV* LRCH GFKL* +E+ +LL +EA +T IW +N + Q W DFNFT*LIP *S VV+ +TL*S F LGK+YWCK G F + CWETTLPLP+ +E ECDKG AS *A L*W Q *+W K*R + GK +W* L + +A Subject 2946 CNHWCRLVQTSGYA*K*ETINSRP*RCT*DGYKLRAKGLGVF*GF*RRL*PQED*RWFYICDIL*SPCEIPG*IESPQNGMFFFWIQGSAAWLPNRSFC*L*H**LQ*IFCTP*RQLLLALCGFPVKHGWARFKSWYTVFC*K*VPCGFIFVLSSSFKATW*RCLCRE*DDSLVLY*APSEVDYYHP*I*SKLEVWGKRVAFVRHSVLEIKSFPTLCPIERLHDHSHCCRAW*T*GGCS*LPMQALHKSHFRRAMSGRWPQYDVPS*GLRSIRYLR*M*YQWGN*NHKSWWTHISLI*HNQ*THNAC*KDWYRSAKHKGGRAEKSEKVSS*PPFNEWVKDNLLPKF*KG*KVARVLVGGPNWCDK**KI**FKAMALKYINCGYQAPRINSCAWHFWGRQKFLVQEFHEEI*R*ICDFCFAQESSS*LH*KRLGNG**LQGGKGWQVKEGRLGCCNL*GLPQEDCKLKSRSLCNF**GSTIPSWLH*SVFADNTE*CLYFTCR*PLPKHIRLPEGSRNIGG*TK*YIEIA*RQILQV*H*EQEVCQSNV*MQTAMSFQEGLHDCSICRLCHFPQHA*LPPSSV*VSLRCHFGFKL*REEDRTILLRHEAAHTYIWRVNWLKFQEWRDFNFT*LIPRR*SQVVDSFVTL*S*FRLGKYYWCKCGKFSVPICWETTLPLPNSKERRECDKGSASW*ANFL*WFQH*YWKK*RCSGGKVVW*PLVESYA 5123
Range 9: 5163 to 5546 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
86.8 bits(183) | 0.0 | 54/128(42%) | 0/128(0%) | Plus/Plus |
Query 2240 *V*MLE*GMV*NPYPIK*SGINKGQVGWKDGIEGTP*SEMWL*NDSTVL**T*VWKKRAIEQRV*KI*KHISKA*R*RFGNLPHGCQETSKVF*ASS*SCKIEARKAIREVLTRHFPF*GSTECKPQC 2623 *V*M +* MV*N + +K GINK VG ++G E * ++W+*++ +L** RA+EQ +*KI*+H+ A* F ++ G + K+F*A+S*S K+EA K + ++ G+ EC PQC Subject 5163 *V*MFK*RMV*NTHTLKQLGINKS*VGRQNGFERKS*GKVWV*DNPAIL**AQGRYGRAVEQCL*KI*EHLP*A*GK*FCHILDGSPKAFKIF*ATS*SGKVEACKTLWKIFA*RILVKGTFECWPQC 5546
Range 10: 3902 to 5572 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
625.1 bits(1358) | 0.0 | 326/557(59%) | 0/557(0%) | Plus/Plus |
Query 979 WMS*EK*NDLLLTSFQ*MDRR*LTFQALRGLKSCRDVC*EA*LVL*VMRNLMIPSHGSQGYQLQISNLGN*QLCLELLEQAKAFCTRAS*RGLKVSS*PLFHPGGL*LIQLKKTWKWMMVAKWQRQANQREKVGTL*PLKYFSERLKI*RQAIV*FLMRFSFFLLATLTFVY*P*EVTLSFHLLVTPVKAHMTPKRTARY*GLSKVTY*DYLRASPTGIILRAGGL*IQCLSLGCHVILRRAP*LQRSLTMPFFTICMTSFWLGLRPP*MPFWFQALRKRKLCSLTLV*SN*H*HLVNQRG*TSNMVGF*FHMTHSILMIVGG*RPYHALVTIWTW*TLLV*AWRVSSHILLGNHFTTS*RRRVGRM**GTCFPVSPTSLMASTLALGEMKECERKSFVVILG*RSCFS*AKMRIARLRKLSLNARMRNGLKPISH*VIWNQQGPGGLERWH*RNTVK*DVVMKRLNSSLMNIGVEEASN*ATRVKDLKAYIQGIKVTIR*PSSWLSGNV*SFLSLKLKLQN*GAQSHTGSSY*TLSFLRFH*MQATMLT*CMKPYK 2649 W S*EK* LLTSFQ*M + *LT Q L+GLKSC+ C A*LV *VM+NLMI SHGSQ YQL IS+ N*QLCL LL QAK CTR S*R LKV+ * LF PG L*L LK+TWKWM+VA+WQR A+QR KVG L*PL+ S RL+ *+Q IV*FLMRF++ LLATL V * + FHL VTP KAH TP+R A+Y GL+KV Y*D L+A T I LRAGGL IQCL+ CHVI RRAP*LQ MPF T CMTS LGL P*MPFWFQAL++R+ + T *S+ H HL +Q * S M GF*FHMTHS MI GG*+ HALV I TW* LLV* W+V LLGNHFTTS*++R RM**G CF VS SLM S L L EMK RKS +V LG*+ C +M+I +LR LSLN +M+NGLK * WNQQ GG +W *+ V+ V M++ ++SLM+ G AS+*A VKDL+A+ GI+ I S W S +V*+FLS KLK Q+*G Q+ + T S R+ *M ATM T M+ +K Subject 3902 WTS*EK*KGQLLTSFQ*MGQG*LTSQVLKGLKSCKGACWGA*LV**VMKNLMIQSHGSQVYQLWISSPEN*QLCLALLGQAKVSCTRVS*RDLKVNL*LLFRPGEL*LTPLKETWKWMIVARWQRLASQRRKVGML*PLRSSSGRLQA*KQVIV*FLMRFNYSLLATLICVC*QYGMMPLFHLPVTPAKAHTTPRRIAQYWGLNKVIY*DCLKADLTSITLRAGGLSIQCLNADCHVISRRAP*LQHLPIMPFSTTCMTSS*LGLSLP*MPFWFQALKRRRSYNPTSA*SSSHLHLASQLA*ISRMAGF*FHMTHSTPMIAGG*QLCHALVII*TW*ILLV*VWKVFCPNLLGNHFTTS*QQRAERM**GICFLVSQFSLMVSALILEEMKVFGRKSCMVTLG*KLCSFWVRMKIVKLRSLSLNVQMKNGLKHTYP*ATWNQQELGGSAKWL*KKIVRQGVGMRQPSNSLMSTGEVWASS*AMLVKDLRAFTLGIREMILSHS*WQSESV*NFLSHKLKRQS*GVQNLMENFCLTHSCQRYL*MLATMSTCFMRQFK 5572
Range 11: 3164 to 3853 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
236.6 bits(510) | 0.0 | 137/230(60%) | 0/230(0%) | Plus/Plus |
Query 241 N*ESTGRNVPFQGLEKYYLVVKLRPLLIMTLMTLTNFLCLVMVTAFGTQWVSC*AQTGLL*KLAYVHLLKVNPLQIQLCQPKLF*SNLVTMLMQRTR**PYSALGIM*G*SSSPQSMR*VGNLEIVSGLYVEFCACNQIIFNPVPH*MXXXXXXXXXRSADVRWMSLTICADLPQITSLKNCAKVVA*T*CTSLRPSKHSTFVPSVTLMEKSRLLILADACQLYLT*PMN 930 N*EST RNV F K LV K + LLIMTLMT NFL V A GT WVSC*A+ G L*KL Y LLKV+PL+I LC + F*SNLV MLMQR R**P LG *G* SP +M+*VG+L SGL FCA NQII N VPH* AA* L R DVRWM LT A PQIT K+ + VA *CT LRPSKHS F +V M K + IL DA Q YLT*PMN Subject 3164 N*ESTKRNVLFLDPGKCCLVAKSKLLLIMTLMTSINFLYPVTAIASGTLWVSC*ARMGSL*KLVYGLLLKVSPLRIHLCPLQQF*SNLVKMLMQRMR**PCFVLGTK*G*LLSPLNMK*VGSLGKASGLCAAFCA*NQIISNLVPH*TAA*SQPLLPRLVDVRWMFLTTYAGPPQITFSKSYVREVASI*CT*LRPSKHSIFALNVISMGKLKS*ILVDAYQPYLT*PMN 3853
Range 12: 2945 to 3124 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
69.8 bits(146) | 0.0 | 32/60(53%) | 0/60(0%) | Plus/Plus |
Query 22 LQQLVQAYLSC*MCLGARSNQY*SLKVHLQWIPAMDQRFWDLLRYSKGTSTLRKLKMAPY 201 LQ LVQA + +CL R+NQ+ SLKVHL+WI QR W LLR+ K T R+LKM Y Subject 2945 LQPLVQACPNFWICLEVRNNQFSSLKVHLRWIQVTGQRSWGLLRFLKETLASRRLKMVLY 3124
Range 13: 4058 to 5560 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
466.1 bits(1011) | 0.0 | 275/501(55%) | 0/501(0%) | Minus/Minus |
Query 1135 HASG*HCGLHSVEP*KGKCLVRTSRMALRASILQLQLEA*KTLDVS*QP*GRLPNRYLYALDICFQIFHTRCSIARFFHTYVHQRTVESFHNHISLHGVPSMPSFQPTWPLLIPDYLMGYGF*TIPHSSIQTQFPQPRNPHLGLRKA*PLAKDHHKAFPLALLHFAQC*R*SH*RSWAHREAXXXXXXXXXXXXXXGKVVSQQNVRGNPPRLHQ*CLPSPNCD*SVIGPLTTYDHQYGMSHVKLKSHHV*SSAPLIHQMLVLVASYQSKTAQFSFPQSLKPEWHLRRS*TEPEGSHAYCEKWHSQRTLQSWSPS*NDMAA*TQTLDSQTSGSQYYTCRTCPQVISICHFAQPLVSRGPFGSHMCFDRGHQQVK*KRHFLWSIDKGQRSQEEKAEPHQKSHNGLPLDFQSF*EILQRSQRXXXXXXXXXXXXXXNHHPFPGLF*LN*LEPSWVKQRSRTYLQTXXXXSCTESFCLLQKFQAQLSIPEI*YLKLISLRAMAWN 2637 H + *HCG HS P + L AS L LQL A*K L+ P N + YA C QIFH CS AR + HQR H H H S P +PT LLIP L F*TI H +IQTQ PQ N H ++A* K HH FP LHF Q * *+H*R AH+EA PLSHS S GSGKVVSQQ N P LHQ* LPS N D*SV TT DH+ GMSHVKLKS H *+ + L QM V AS +S+ + S QSLKP+WHLR +*TE GSHA C KWH+++ LQSWSPS*NDMA QTLD QTS SQ YTC+ C Q ISI HF QP + R P GS MCF RGH+QVK*+ H + S + Q SQE EPHQK HN L L QS * QR Q PNL SL C PLP CN+HPFP LF* +*LE SW KQ+S+ YLQ SS*+SCT +FCL QK QAQL I *Y +LI LRAMA N Subject 4058 HETC*HCGQHSKVPLTRMRQAKIFHKVLHASTLPLQLVA*KILNAFGLPSRM*QNHFPYA*GKCSQIFHKHCSTARPYLPCAHQRIAGLSHTHTLPHDFLSKPFCRPT*LLLIPSCLRVCVF*TILHLNIQTQAPQLHNLHPDPKRA*LSTKGHHTTFPPEHLHFFQY*C*NH*RKLAHQEADPLSHSLRSLLLGSGKVVSQQIGTENFPHLHQ*YLPSLNYD*SVTKLSTTCDHRRGMSHVKLKSRHS*NLSQLTRQM*V*AASCRSRIVRSSSLQSLKPKWHLRET*TELGGSHACCGKWHNRQMLQSWSPS*NDMAVCIQTLD*QTSCSQCYTCKICLQAISIYHFVQPPILRDPSGSRMCFGRGHRQVK*RHHSVLSANTDQCSQEGIVEPHQKLHNDLLLSLQSS*GRPQRLQHPNLPSLTCQPLPPCNYHPFPSLF*WS*LELSWAKQKSQIYLQISS*NSCTRNFCLPQKCQAQLLILGA*YPQLIYLRAMALN 5560
Range 14: 2939 to 4003 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
408.4 bits(885) | 0.0 | 204/355(57%) | 0/355(0%) | Minus/Minus |
Query 16 AAFQPSQSLESKLSSIHSLKGGQEQIVSLLSAHPPLCSAGHCQSSQHVLYVHWLCQIKLTCVR*D**PRFLH*CHTWHKCRMLRRPQRGTSCSGHHLGTILQRCDLWKVCTDS*GHPPHVCRAQRQ*RLSCSHSMGHRVENDLIASTKFHIKATHYLQISNLPHTLG***SASHDA*CRIRLSSRSLHKHCHQVASKQFGLTELDLQWIHFQQMNVCQLSKQARLCSTRNPLSAKSSYHHQAQKIC*SHQCHNQQRPQFDNQVVLL*TLKRNIPSCGLSICQEISQEPCKILQIWSHLQFS*C*SPL*IPQKIPKSLVHSWYPLQVHLQGLVLIASCS*AHLAT*ISLHQLLQRQ 1080 A FQP Q+L SKLS HSLKGGQE SL SA PPLC A QS QH L VHWLCQI+L CV D * +F H* H K RMLRRPQ GTS GH L++CDLW+ C S* HPPHV +A++Q SCS SMGH+V NDLI+ST+ KAT + Q SNL H G***S S A* + RLSS SLHKH HQVA K T+++ Q HFQQ V QL K+A C T NP SA+S+ H QKI *SHQCHNQQ+ +F NQ L K+NIP CGLSI ISQ KI QI +HLQ S* *S L* PQK P+ L + YP QVHLQG LI S *A+ SLHQ LQ++ Subject 2939 ATFQPFQNLGSKLSLTHSLKGGQELTFSLFSARPPLCFADRYQSFQHALCVHWLCQIRLICVHQDL*FQFPH*YHI*RKYRMLRRPQLGTSY*GHLPDIALRKCDLWRACIGS*EHPPHVYQARQQWL*SCSRSMGHKVGNDLISSTECRTKATRFPQTSNLLHIQG***STSLGA*YKTRLSSHSLHKHLHQVALKLLERTKMNPQGTHFQQKTVYQLLKRAHPCLTGNPQSARSNCRHGVQKIY*SHQCHNQQKLRFGNQAALPWIQKKNIPFCGLSIYPGISQGLYKISQI*NHLQSS*G*SLL*KPQKTPRPLARNLYPSQVHLQGRELIVSYF*AYPEVWTSLHQWLQKR 4003
Nucleotide Sequence (178 letters)
Query ID: | ds2016-133_14 |
Query definition: | No definition line |
Query length: | 603 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
71.6 | 194.2 | 18% | 7.339e-12 | 83% | AY368590.1 | |
71.1 | 177.3 | 18% | 1.008e-11 | 72% | AB277783.1 | |
69.8 | 185.5 | 18% | 2.61e-11 | 75% | KX274275.1 | |
68.8 | 68.8 | 18% | 4.923e-11 | 91% | AB277787.1 | |
68.8 | 159.4 | 16% | 4.923e-11 | 67% | AY881627.1 |
Alignments
Rupestris stem pitting associated virus strain Syrah, complete genome
Sequence ID: AY368590.1 Length: 8742 Number of Matches: 3
Range 1: 6631 to 6726 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
71.6 bits(150) | 0.0 | 31/32(97%) | 0/32(0%) | Plus/Plus |
Query 1 VLRFPVVVHSVPGSGKSSLIRELITEDESFTA 96 VLRFPVVVHSVPGSGKSSLIRELITEDESF A Subject 6631 VLRFPVVVHSVPGSGKSSLIRELITEDESFIA 6726
Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OB1
Sequence ID: AB277783.1 Length: 2876 Number of Matches: 3
Range 1: 887 to 982 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
71.1 bits(149) | 0.0 | 30/32(94%) | 0/32(0%) | Plus/Plus |
Query 1 VLRFPVVVHSVPGSGKSSLIRELITEDESFTA 96 VLRFPVVVHSVPGSGKSSLIREL+TEDESF A Subject 887 VLRFPVVVHSVPGSGKSSLIRELVTEDESFIA 982
Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome
Sequence ID: KX274275.1 Length: 8724 Number of Matches: 3
Range 1: 6631 to 6726 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
69.8 bits(146) | 0.0 | 29/32(91%) | 0/32(0%) | Plus/Plus |
Query 1 VLRFPVVVHSVPGSGKSSLIRELITEDESFTA 96 VLRFPVVVHSVPGSGKSSLIREL+TEDE+F A Subject 6631 VLRFPVVVHSVPGSGKSSLIRELVTEDENFIA 6726
Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: Hai1
Sequence ID: AB277787.1 Length: 2876 Number of Matches: 1
Rupestris stem pitting associated virus strain BS, complete genome
Sequence ID: AY881627.1 Length: 8743 Number of Matches: 3
Range 1: 6631 to 6726 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
68.8 bits(144) | 0.0 | 29/32(91%) | 0/32(0%) | Plus/Plus |
Query 1 VLRFPVVVHSVPGSGKSSLIRELITEDESFTA 96 VL+FPVVVHSVPGSGKSSLIRELI+EDESF A Subject 6631 VLKFPVVVHSVPGSGKSSLIRELISEDESFVA 6726
Nucleotide Sequence (325 letters)
Query ID: | ds2016-133_14 |
Query definition: | No definition line |
Query length: | 603 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
263.6 | 1193.3 | 31% | 6.1e-69 | 78% | KX274275.1 | |
258.6 | 1202.3 | 32% | 2.007e-67 | 81% | AY368590.1 | |
255.4 | 793.6 | 52% | 1.851e-66 | 45% | AY881626.1 | |
254.9 | 805.1 | 52% | 2.543e-66 | 46% | JX559646.1 | |
254.9 | 806.0 | 52% | 2.543e-66 | 46% | KC427107.1 |
Alignments
Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome
Sequence ID: KX274275.1 Length: 8724 Number of Matches: 7
Range 1: 871 to 1194 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
263.6 bits(569) | 0.0 | 108/108(100%) | 0/108(0%) | Minus/Plus |
Query 1 DVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSG 324 DVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSG Subject 871 DVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSG 1194
Range 2: 870 to 1193 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
232.9 bits(502) | 0.0 | 103/108(95%) | 0/108(0%) | Plus/Minus |
Query 2 PLLPQLITSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSRSLMPMASKPEKHRMLDTRRLLIGVKLNK*WQNFE*RTS 325 PLLPQL+TSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLC+PRLRGSRSLMPMASKPEKHRML+T+RLLIGVKLNK*WQNFE RTS Subject 870 PLLPQLMTSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCIPRLRGSRSLMPMASKPEKHRMLETKRLLIGVKLNK*WQNFEWRTS 1193
Range 3: 870 to 1193 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
191.2 bits(411) | 0.0 | 85/108(79%) | 0/108(0%) | Minus/Plus |
Query 2 RCPSLKILPSLVELYTD**SSGI*HSVFLWF*RHRH*GSGASKSRHA*LLSGAS*CRY*NIPLFENS*KT**RICRGEIASAY*QAYWKRD*IH*RLCFTCYKLWKKW 325 RCP KILPSL+EL+ + *S *HSVFLWF*RHRH*GSGASKSR+A*LLSGAS*C Y*NI LFEN K **RICRGEIASAY Q WK D*IH* CFTC+KLWKKW Subject 870 RCPPFKILPSLIELHPNQ*SFSF*HSVFLWF*RHRH*GSGASKSRYA*LLSGAS*CCY*NISLFENPQKA**RICRGEIASAYRQTNWKGD*IH*GFCFTCHKLWKKW 1193
Range 4: 872 to 1192 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
188.0 bits(404) | 0.0 | 86/107(80%) | 0/107(0%) | Plus/Minus |
Query 3 HFFHNL*QVKQSLQ*I*SLFQ*ACQ*ADAISPRQILYQVF*EFSNRGIF**RHHDAPESSYACRDLEAPDP*CLWRQNQRNTEC*IPEDY*SV*SSTSDGRILSEGH 323 HFFHNL*QVKQ+ Q*I*S FQ C+*ADAISPRQILYQ F* FSN+ IF**+HHDAPESSYA RDLEAPDP*C WRQNQRNTEC* +DY* *SS SDGRIL+ GH Subject 872 HFFHNL*QVKQNPQ*I*SPFQLVCR*ADAISPRQILYQAF*GFSNKDIF**QHHDAPESSYAYRDLEAPDP*CRWRQNQRNTEC*KLKDY*LG*SSISDGRILNGGH 1192
Range 5: 871 to 1194 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
184.8 bits(397) | 0.0 | 84/108(78%) | 0/108(0%) | Plus/Minus |
Query 1 ATSSTTYNK*SKVFNEFNLSSSRLVNKLTQFRLGRFFIRFFKSSQIEVYFSNDIMMHRKAAMHAAT*RLQILNAYGVKTRETPNVRYQKIINRCKAQQVMAEF*VKDI 324 ATSSTTY+K*SK+ NEFNL SS V+KLTQFRLGRFFIR F+ SQI++YFSN+IMMHRKAAMH AT*RLQILNA GVKTRETPNVR KII+ +AQ VMAEF*++DI Subject 871 ATSSTTYDK*SKILNEFNLPSSWFVDKLTQFRLGRFFIRLFEGSQIKIYFSNNIMMHRKAAMHTAT*RLQILNADGVKTRETPNVRN*KIIDWGEAQ*VMAEF*MEDI 1194
Range 6: 872 to 1051 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
100.0 bits(212) | 0.0 | 48/60(80%) | 0/60(0%) | Minus/Plus |
Query 144 MSFTQNSAITC*ALHRLIIFWYLTFGVSLVLTP*ALRIWSL*VAACIAAFRCIMMSLLKY 323 MS QNSAIT *A + IIF +LTFGVSLVLTP ALRIWSL*VA CIAAFRCIMM LLKY Subject 872 MSSIQNSAITY*ASPQSIIF*FLTFGVSLVLTPSALRIWSL*VAVCIAAFRCIMMLLLKY 1051
Rupestris stem pitting associated virus strain Syrah, complete genome
Sequence ID: AY368590.1 Length: 8742 Number of Matches: 6
Range 1: 871 to 1194 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
258.6 bits(558) | 0.0 | 106/108(98%) | 0/108(0%) | Minus/Plus |
Query 1 DVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSG 324 DVLHSKFCHHLLSFTPI+NLLVSNIRCFSGFDAIGIKDLEPL RGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSG Subject 871 DVLHSKFCHHLLSFTPISNLLVSNIRCFSGFDAIGIKDLEPLIRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSG 1194
Range 2: 870 to 1193 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
234.3 bits(505) | 0.0 | 104/108(96%) | 0/108(0%) | Plus/Minus |
Query 2 PLLPQLITSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSRSLMPMASKPEKHRMLDTRRLLIGVKLNK*WQNFE*RTS 325 PLLPQLITSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPR+RGSRSLMPMASKPEKHRML+TRRLLIGVKLNK WQNFE RTS Subject 870 PLLPQLITSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRIRGSRSLMPMASKPEKHRMLETRRLLIGVKLNKWWQNFEWRTS 1193
Range 3: 870 to 1193 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
199.5 bits(429) | 0.0 | 89/108(82%) | 0/108(0%) | Minus/Plus |
Query 2 RCPSLKILPSLVELYTD**SSGI*HSVFLWF*RHRH*GSGASKSRHA*LLSGAS*CRY*NIPLFENS*KT**RICRGEIASAY*QAYWKRD*IH*RLCFTCYKLWKKW 325 RC KILP L+ELY +**SSG *HSVFL F*RHRH* SGAS SRHA*LLSG S*C Y*NIPLFENS*K ** ICRGEIASAY QAYW+RD*IH*R CF CYKLWKKW Subject 870 RCSPFKILPPLIELYPN**SSGF*HSVFLRF*RHRH*RSGASNSRHA*LLSGTS*CCY*NIPLFENS*KA**GICRGEIASAYRQAYWERD*IH*RFCFACYKLWKKW 1193
Range 4: 872 to 1192 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
192.1 bits(413) | 0.0 | 87/107(81%) | 0/107(0%) | Plus/Minus |
Query 3 HFFHNL*QVKQSLQ*I*SLFQ*ACQ*ADAISPRQILYQVF*EFSNRGIF**RHHDAPESSYACRDLEAPDP*CLWRQNQRNTEC*IPEDY*SV*SSTSDGRILSEGH 323 HFFHNL*Q KQ+LQ*I*SL Q*AC+*ADAISPRQI YQ F*EFSNRGIF**+HHD PESSYACR+LEAPD *C WRQN+RNTEC* PEDY* *SS S GRIL+ H Subject 872 HFFHNL*QAKQNLQ*I*SLSQ*ACR*ADAISPRQIPYQAF*EFSNRGIF**QHHDVPESSYACRELEAPDL*CRWRQNRRNTEC*KPEDY*LG*SSISGGRILNGEH 1192
Range 5: 871 to 1194 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
189.8 bits(408) | 0.0 | 87/108(81%) | 0/108(0%) | Plus/Minus |
Query 1 ATSSTTYNK*SKVFNEFNLSSSRLVNKLTQFRLGRFFIRFFKSSQIEVYFSNDIMMHRKAAMHAAT*RLQILNAYGVKTRETPNVRYQKIINRCKAQQVMAEF*VKDI 324 ATSSTTYNK SK+FNEFNLS SRLV+KLTQFRLGRF IR FKSSQIEVYFSN+IMM+RKAAMHAA *RLQI NA GVKT ETPNVR QKI N KAQ V+AEF*+++I Subject 871 ATSSTTYNKRSKIFNEFNLSPSRLVDKLTQFRLGRFLIRLFKSSQIEVYFSNNIMMYRKAAMHAAN*RLQIFNADGVKTGETPNVRNQKITNWGKAQ*VVAEF*MENI 1194
Range 6: 884 to 1192 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.0 bits(273) | 0.0 | 85/103(83%) | 0/103(0%) | Minus/Plus |
Query 3 QNSAITC*ALHRLIIFWYLTFGVSLVLTP*ALRIWSL*VAACIAAFRCIMMSLLKYTSXXXXXXXXXXXLPRRNCVSLLTSLLEERXXXXXXXXXXX*VVEEV 311 QNSA T *AL +L+IFW+LTFGVS VLTP AL+IWSL* AACIAAFR IMM LLKYTSI*ELLK+LI+NLPRRNCVSL TSLL ERLNSLK LL LL*VVEEV Subject 884 QNSATTY*ALPQLVIFWFLTFGVSPVLTPSALKIWSL*FAACIAAFRYIMMLLLKYTSI*ELLKSLIRNLPRRNCVSLSTSLLGERLNSLKILLRLL*VVEEV 1192
Rupestris stem pitting associated virus strain SG1, complete genome
Sequence ID: AY881626.1 Length: 8742 Number of Matches: 6
Range 1: 871 to 1194 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
255.4 bits(551) | 0.0 | 102/108(94%) | 0/108(0%) | Minus/Plus |
Query 1 DVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSG 324 D++HSKFCHHLLSFTPI NLL SN+RCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDF+SLVISCGRSG Subject 871 DIIHSKFCHHLLSFTPIGNLLTSNLRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFSSLVISCGRSG 1194
Range 2: 870 to 1193 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
202.2 bits(435) | 0.0 | 90/108(83%) | 0/108(0%) | Plus/Minus |
Query 2 PLLPQLITSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSRSLMPMASKPEKHRMLDTRRLLIGVKLNK*WQNFE*RTS 325 PLLPQLIT+E KSSMN ISLPVGLSIS*R+FASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSRS MP+ASKPEKH + +RL +GVKL+K WQNFE* S Subject 870 PLLPQLITNEEKSSMNFISLPVGLSIS*RSFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSRSFMPIASKPEKHLKFEVKRLPMGVKLSKWWQNFE*MIS 1193
Range 3: 871 to 1194 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.9 bits(240) | 0.0 | 55/108(51%) | 0/108(0%) | Plus/Minus |
Query 1 ATSSTTYNK*SKVFNEFNLSSSRLVNKLTQFRLGRFFIRFFKSSQIEVYFSNDIMMHRKAAMHAAT*RLQILNAYGVKTRETPNVRYQKIINRCKAQQVMAEF*VKDI 324 AT T YN * K+ NEF S L+NKLT+ L R + KS ++VY DIMMH K +HA *R +IL AY +KTR+TP V QKI +A+QV+AEF*V DI Subject 871 ATPPTAYN**GKILNEFYFSPCGLINKLTKLCLSRLLVWLLKSP*VKVYLGYDIMMHWKTTVHATA*RFKILYAYCIKTRKTPQV*GQKIAYGGEAKQVVAEF*VNDI 1194
Range 4: 879 to 1193 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
89.0 bits(188) | 0.0 | 49/105(47%) | 0/105(0%) | Minus/Plus |
Query 2 SLKILPSLVELYTD**SSGI*HSVFLWF*RHRH*GSGASKSRHA*LLSGAS*CRY*NIPLFENS*KT**RICRGEIASAY*QAYWKRD*IH*RLCFTCYKLWKKW 316 SLKILP L L+ S + VF WF* +RH GS SK HA L S AS*CR +IPL ++S*+ +C G+ +S Y* A+ +R+ IH* YKLW++W Subject 879 SLKILPPLA*LHPHRQSFDLKLEVFFWF*CNRHKGS*TSKPWHAQLFSSAS*CRNQDIPLLKDS*EARQGVC*GKASSTY**AHRERNKIH*GFFLISYKLWEEW 1193
Range 5: 878 to 1192 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
74.4 bits(156) | 0.0 | 47/105(45%) | 0/105(0%) | Plus/Minus |
Query 3 HFFHNL*QVKQSLQ*I*SLFQ*ACQ*ADAISPRQILYQVF*EFSNRGIF**RHHDAPESSYACRDLEAPDP*CLWRQNQRNTEC*IPEDY*SV*SSTSDGRILSE 317 H H+L* ++++ Q*I L A Q* D P+Q *E ++GI RHHDA E++ AC LE DP CL QNQ+NT +D *S S GRILSE Subject 878 HSSHSL*LMRKNPQ*ILFLSLWAYQ*VDEALPQQTPCLAS*ESLSKGISWLRHHDALENNCACHGLEVQDPLCLLHQNQKNTSSLRSKDCLWG*S*ASGGRILSE 1192
Range 6: 872 to 1054 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
59.7 bits(124) | 0.0 | 34/61(56%) | 0/61(0%) | Minus/Plus |
Query 141 MSFTQNSAITC*ALHRLIIFWYLTFGVSLVLTP*ALRIWSL*VAACIAAFRCIMMSLLKYT 323 +SFTQNSA TC A IF T GV LVL *A RI +L* AC F+CIMMS +YT Subject 872 ISFTQNSATTCLASPP*AIF*PQT*GVFLVLMQ*A*RILNL*AVACTVVFQCIMMS*PRYT 1054
Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome
Sequence ID: JX559646.1 Length: 8726 Number of Matches: 6
Range 1: 871 to 1194 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
254.9 bits(550) | 0.0 | 102/108(94%) | 0/108(0%) | Minus/Plus |
Query 1 DVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSG 324 D++HSKFCHHLLSFTPI NLL SN+RCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDF+SLVISCGRSG Subject 871 DIIHSKFCHHLLSFTPIGNLLTSNMRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFSSLVISCGRSG 1194
Range 2: 870 to 1193 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
205.0 bits(441) | 0.0 | 91/108(84%) | 0/108(0%) | Plus/Minus |
Query 2 PLLPQLITSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSRSLMPMASKPEKHRMLDTRRLLIGVKLNK*WQNFE*RTS 325 PLLPQLIT+E KSSMN ISLPVGLSIS*R+FASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSRS MP+ASKPEKH M + +RL +GVKL+K WQNFE* S Subject 870 PLLPQLITNEEKSSMNFISLPVGLSIS*RSFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSRSFMPIASKPEKHLMFEVKRLPMGVKLSKWWQNFE*MIS 1193
Range 3: 871 to 1194 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
113.3 bits(241) | 0.0 | 55/108(51%) | 0/108(0%) | Plus/Minus |
Query 1 ATSSTTYNK*SKVFNEFNLSSSRLVNKLTQFRLGRFFIRFFKSSQIEVYFSNDIMMHRKAAMHAAT*RLQILNAYGVKTRETPNVRYQKIINRCKAQQVMAEF*VKDI 324 AT T YN * K+ NEF S L+NKLT+ L R + KS ++VY +IMMH K +HA T*R +IL AY +KTR+TP+V QKI +A+QV+AEF*V DI Subject 871 ATPPTAYN**GKILNEFYFSPCGLINKLTKLCLSRLLVWLLKSP*VKVYLGYNIMMHWKTTVHATT*RFKILYAYCIKTRKTPHV*GQKIAYGGEAKQVVAEF*VNDI 1194
Range 4: 879 to 1193 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
92.7 bits(196) | 0.0 | 50/105(48%) | 0/105(0%) | Minus/Plus |
Query 2 SLKILPSLVELYTD**SSGI*HSVFLWF*RHRH*GSGASKSRHA*LLSGAS*CRY*NIPLFENS*KT**RICRGEIASAY*QAYWKRD*IH*RLCFTCYKLWKKW 316 SLKILP L L+ S + H VF WF* +RH GS SKS HA L S AS*C +IPL ++S*+ +C G+ +S Y* A+ +R+ IH* YKLW++W Subject 879 SLKILPPLA*LHPHRQSFDLKHEVFFWF*CNRHKGS*TSKSWHAQLFSSAS*CCNQDIPLLKDS*EARQGVC*GKASSTY**AHRERNKIH*GFFLISYKLWEEW 1193
Range 5: 878 to 1192 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
80.3 bits(169) | 0.0 | 48/105(46%) | 0/105(0%) | Plus/Minus |
Query 3 HFFHNL*QVKQSLQ*I*SLFQ*ACQ*ADAISPRQILYQVF*EFSNRGIF**RHHDAPESSYACRDLEAPDP*CLWRQNQRNTEC*IPEDY*SV*SSTSDGRILSE 317 H H+L* ++++ Q*I L A Q* D P+Q *E ++GI +HHDA E++ AC DLE DP CL QNQ+NT C +D *S S GRILSE Subject 878 HSSHSL*LMRKNPQ*ILFLSLWAYQ*VDEALPQQTPCLAS*ESLSKGISWLQHHDALENNCACHDLEVQDPLCLLHQNQKNTSCLRSKDCLWG*S*ASGGRILSE 1192
Range 6: 872 to 1054 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
58.8 bits(122) | 0.0 | 34/61(56%) | 0/61(0%) | Minus/Plus |
Query 141 MSFTQNSAITC*ALHRLIIFWYLTFGVSLVLTP*ALRIWSL*VAACIAAFRCIMMSLLKYT 323 +SFTQNSA TC A IF T GV LVL *A RI +L*V AC F+CIMM +YT Subject 872 ISFTQNSATTCLASPP*AIF*PQT*GVFLVLMQ*A*RILNL*VVACTVVFQCIMML*PRYT 1054
Grapevine rupestris stem pitting associated virus isolate GRSPaV WA, complete genome
Sequence ID: KC427107.1 Length: 8742 Number of Matches: 6
Range 1: 871 to 1194 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
254.9 bits(550) | 0.0 | 102/108(94%) | 0/108(0%) | Minus/Plus |
Query 1 DVLHSKFCHHLLSFTPINNLLVSNIRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFASLVISCGRSG 324 D++HSKFCHHLLSFTPI NLL SN+RCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDF+SLVISCGRSG Subject 871 DIIHSKFCHHLLSFTPIGNLLTSNMRCFSGFDAIGIKDLEPLSRGMHSCFPVHHDVVTKIYLYLRTLKKPDKESAEAKLRQLIDKPTGREIKFIEDFSSLVISCGRSG 1194
Range 2: 870 to 1193 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
205.0 bits(441) | 0.0 | 91/108(84%) | 0/108(0%) | Plus/Minus |
Query 2 PLLPQLITSEAKSSMNLISLPVGLSIS*RNFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSRSLMPMASKPEKHRMLDTRRLLIGVKLNK*WQNFE*RTS 325 PLLPQLIT+E KSSMN ISLPVGLSIS*R+FASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSRS MP+ASKPEKH M + +RL +GVKL+K WQNFE* S Subject 870 PLLPQLITNEEKSSMNFISLPVGLSIS*RSFASADSLSGFLRVLK*RYILVTTS*CTGKQLCMPRLRGSRSFMPIASKPEKHLMFEVKRLPMGVKLSKWWQNFE*MIS 1193
Range 3: 871 to 1194 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
113.3 bits(241) | 0.0 | 55/108(51%) | 0/108(0%) | Plus/Minus |
Query 1 ATSSTTYNK*SKVFNEFNLSSSRLVNKLTQFRLGRFFIRFFKSSQIEVYFSNDIMMHRKAAMHAAT*RLQILNAYGVKTRETPNVRYQKIINRCKAQQVMAEF*VKDI 324 AT T YN * K+ NEF S L+NKLT+ L R + KS ++VY DIMMH K +HA *R +IL AY +KTR+TP+V QKI +A+QV+AEF*V DI Subject 871 ATPPTAYN**GKILNEFYFSPCGLINKLTKLCLSRLLVWLLKSP*VKVYLGYDIMMHWKTTVHATA*RFKILYAYCIKTRKTPHV*GQKIAYGGEAKQVVAEF*VNDI 1194
Range 4: 879 to 1193 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
94.1 bits(199) | 0.0 | 50/105(48%) | 0/105(0%) | Minus/Plus |
Query 2 SLKILPSLVELYTD**SSGI*HSVFLWF*RHRH*GSGASKSRHA*LLSGAS*CRY*NIPLFENS*KT**RICRGEIASAY*QAYWKRD*IH*RLCFTCYKLWKKW 316 SLKILP L L+ S + H VF WF* +RH GS SK HA L S AS*CR +IPL ++S*+ +C G+ +S Y* A+ +R+ IH* YKLW++W Subject 879 SLKILPPLA*LHPHRQSFDLKHEVFFWF*CNRHKGS*TSKPWHAQLFSSAS*CRNQDIPLLKDS*EARQGVC*GKASSTY**AHRERNKIH*GFFLISYKLWEEW 1193
Range 5: 878 to 1192 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.0 bits(166) | 0.0 | 48/105(46%) | 0/105(0%) | Plus/Minus |
Query 3 HFFHNL*QVKQSLQ*I*SLFQ*ACQ*ADAISPRQILYQVF*EFSNRGIF**RHHDAPESSYACRDLEAPDP*CLWRQNQRNTEC*IPEDY*SV*SSTSDGRILSE 317 H H+L* ++++ Q*I L A Q* D P+Q *E ++GI RHHDA E++ AC LE DP CL QNQ+NT C +D *S S GRILSE Subject 878 HSSHSL*LMRKNPQ*ILFLSLWAYQ*VDEALPQQTPCLAS*ESLSKGISWLRHHDALENNCACHGLEVQDPLCLLHQNQKNTSCLRSKDCLWG*S*ASGGRILSE 1192
Range 6: 872 to 1054 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
59.7 bits(124) | 0.0 | 34/61(56%) | 0/61(0%) | Minus/Plus |
Query 141 MSFTQNSAITC*ALHRLIIFWYLTFGVSLVLTP*ALRIWSL*VAACIAAFRCIMMSLLKYT 323 +SFTQNSA TC A IF T GV LVL *A RI +L* AC F+CIMMS +YT Subject 872 ISFTQNSATTCLASPP*AIF*PQT*GVFLVLMQ*A*RILNL*AVACTVVFQCIMMS*PRYT 1054
Nucleotide Sequence (181 letters)
Query ID: | ds2016-133_14 |
Query definition: | No definition line |
Query length: | 603 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
137.6 | 663.5 | 40% | 1.071e-31 | 86% | AB277783.1 | |
136.7 | 680.0 | 40% | 2.021e-31 | 89% | KX274275.1 | |
130.3 | 678.6 | 41% | 1.724e-29 | 92% | AY368590.1 | |
126.6 | 390.2 | 34% | 2.188e-28 | 53% | AF026278.1 | |
126.2 | 399.9 | 28% | 2.733e-28 | 54% | JX559646.1 |
Alignments
Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OB1
Sequence ID: AB277783.1 Length: 2876 Number of Matches: 6
Range 1: 683 to 862 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
137.6 bits(294) | 0.0 | 58/60(97%) | 0/60(0%) | Minus/Plus |
Query 2 SIEMMNEEEVEAHYNCVRFLVRNKHKMRYSISGLFEAID*ALSVWHGVIIMNNLVKALST 181 SIEMMNEEEVEAHYNCVRFLVRNKHKMR SISGLFEAID*ALS+WHGVIIMNNLVKALST Subject 683 SIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHGVIIMNNLVKALST 862
Range 2: 685 to 861 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
127.5 bits(272) | 0.0 | 57/59(97%) | 0/59(0%) | Plus/Minus |
Query 3 VDKALTKLFIIITPCQTLKA*SIASNNPEIEYLILCLFLTRNRTQL*CASTSSSFIISI 179 VDKALTKLFIIITPCQ LKA*SIASNNPEIE+LILCLFLTRNRTQL*CASTSSSFIISI Subject 685 VDKALTKLFIIITPCQILKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISI 861
Range 3: 685 to 861 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
118.4 bits(252) | 0.0 | 52/59(88%) | 0/59(0%) | Minus/Plus |
Query 3 N*NDE*RRS*SALQLCAVPG*K*AQDEILNFWIV*SYRLGLKCLAWCDYYE*LS*SFVY 179 N*NDE*R S*S LQLCAVP *K* QDE+LNFW+V*SYRLGLK LAWCDYYE*LS*SFVY Subject 685 N*NDE*RGS*STLQLCAVPS*K*TQDEVLNFWVV*SYRLGLKYLAWCDYYE*LS*SFVY 861
Range 4: 684 to 863 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
114.2 bits(243) | 0.0 | 53/60(88%) | 0/60(0%) | Plus/Minus |
Query 1 T*TKL*LSYS**SHHAKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQLLLHSSFQL 180 T*TKL*LSYS**SHHAK+LRPNL*LQT QKLS SSC YF* GTAHSCS LQL LHSSFQL Subject 684 T*TKL*LSYS**SHHAKYLRPNL*LQTTQKLSTSSCVYF*LGTAHSCSVLQLPLHSSFQL 863
Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome
Sequence ID: KX274275.1 Length: 8724 Number of Matches: 6
Range 1: 6427 to 6606 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
136.7 bits(292) | 0.0 | 58/60(97%) | 0/60(0%) | Minus/Plus |
Query 2 SIEMMNEEEVEAHYNCVRFLVRNKHKMRYSISGLFEAID*ALSVWHGVIIMNNLVKALST 181 +IEMMNEEEVEAHYNCVRFLVRNKHKMR SISGLFEAID*ALSVWHGVIIMNNLVKALST Subject 6427 AIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALST 6606
Range 2: 6429 to 6605 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
130.3 bits(278) | 0.0 | 58/59(98%) | 0/59(0%) | Plus/Minus |
Query 3 VDKALTKLFIIITPCQTLKA*SIASNNPEIEYLILCLFLTRNRTQL*CASTSSSFIISI 179 VDKALTKLFIIITPCQTLKA*SIASNNPEIE+LILCLFLTRNRTQL*CASTSSSFIISI Subject 6429 VDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISI 6605
Range 3: 6429 to 6605 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
125.2 bits(267) | 0.0 | 54/59(92%) | 0/59(0%) | Minus/Plus |
Query 3 N*NDE*RRS*SALQLCAVPG*K*AQDEILNFWIV*SYRLGLKCLAWCDYYE*LS*SFVY 179 N*NDE*R S*S LQLCAVP *K*AQDE+LNFW+V*SYRLGLKCLAWCDYYE*LS*SFVY Subject 6429 N*NDE*RGS*STLQLCAVPS*K*AQDEVLNFWVV*SYRLGLKCLAWCDYYE*LS*SFVY 6605
Range 4: 6428 to 6607 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
118.8 bits(253) | 0.0 | 55/60(92%) | 0/60(0%) | Plus/Minus |
Query 1 T*TKL*LSYS**SHHAKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQLLLHSSFQL 180 T*TKL*LSYS**SHHAKHLRPNL*LQT QKLS SSCAYF* GTAHSCS LQL LHSSFQL Subject 6428 T*TKL*LSYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*LGTAHSCSVLQLPLHSSFQL 6607
Rupestris stem pitting associated virus strain Syrah, complete genome
Sequence ID: AY368590.1 Length: 8742 Number of Matches: 6
Range 1: 6427 to 6606 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
130.3 bits(278) | 0.0 | 57/60(95%) | 0/60(0%) | Minus/Plus |
Query 2 SIEMMNEEEVEAHYNCVRFLVRNKHKMRYSISGLFEAID*ALSVWHGVIIMNNLVKALST 181 SIEMMNEEEVEAHYNCVRFLVRNKHKMR SISGLFEAID*ALSVWH IIMNNLVKALST Subject 6427 SIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHY*IIMNNLVKALST 6606
Range 2: 6428 to 6607 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.4 bits(263) | 0.0 | 57/60(95%) | 0/60(0%) | Plus/Minus |
Query 1 T*TKL*LSYS**SHHAKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQLLLHSSFQL 180 T*TKL*LSYS**S++AKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQL LHSSFQL Subject 6428 T*TKL*LSYS**SNNAKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQLPLHSSFQL 6607
Range 3: 6429 to 6605 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
121.1 bits(258) | 0.0 | 56/59(95%) | 0/59(0%) | Plus/Minus |
Query 3 VDKALTKLFIIITPCQTLKA*SIASNNPEIEYLILCLFLTRNRTQL*CASTSSSFIISI 179 VDKALTKLFIII CQTLKA*SIASNNPEIE+LILCLFLTRNRTQL*CASTSSSFIISI Subject 6429 VDKALTKLFIII**CQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISI 6605
Range 4: 6429 to 6605 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
118.8 bits(253) | 0.0 | 55/59(93%) | 0/59(0%) | Minus/Plus |
Query 3 N*NDE*RRS*SALQLCAVPG*K*AQDEILNFWIV*SYRLGLKCLAWCDYYE*LS*SFVY 179 N*NDE*R S*SALQLCAVPG*K*AQDE+LNFWIV*SYRLGLKCLA DYYE*LS*SFVY Subject 6429 N*NDE*RGS*SALQLCAVPG*K*AQDEMLNFWIV*SYRLGLKCLALLDYYE*LS*SFVY 6605
Range 5: 6460 to 6606 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
104.6 bits(222) | 0.0 | 46/49(94%) | 0/49(0%) | Plus/Minus |
Query 2 RRQSFN*VIHNNHTMPNT*GLIYSFKQSRN*VSHLVLISNQEPHTVVVR 148 RRQSFN*VIHNN MPNT*GLIYSFKQSRN* SHLVLISNQEPHTVVVR Subject 6460 RRQSFN*VIHNNLIMPNT*GLIYSFKQSRN*ASHLVLISNQEPHTVVVR 6606
Grapevine Rupestris stem pitting associated virus, complete genome
Sequence ID: AF026278.1 Length: 8725 Number of Matches: 5
Range 1: 6427 to 6606 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
126.6 bits(270) | 0.0 | 54/60(90%) | 0/60(0%) | Minus/Plus |
Query 2 SIEMMNEEEVEAHYNCVRFLVRNKHKMRYSISGLFEAID*ALSVWHGVIIMNNLVKALST 181 SIEMM EEEVEAHYNCVRFLVRNKHKMR SISGLFEAID*ALS+WH + IMNNLVKALST Subject 6427 SIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHYLSIMNNLVKALST 6606
Range 2: 6429 to 6605 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
99.6 bits(211) | 0.0 | 47/59(80%) | 0/59(0%) | Plus/Minus |
Query 3 VDKALTKLFIIITPCQTLKA*SIASNNPEIEYLILCLFLTRNRTQL*CASTSSSFIISI 179 VD ALTKLFII+ CQ LKA*SIASN PEIE+LILCLFLT+N TQL* ASTSSS IIS+ Subject 6429 VDNALTKLFIILK*CQILKA*SIASNRPEIEHLILCLFLTKNLTQL*WASTSSSVIISM 6605
Range 3: 6463 to 6600 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
62.0 bits(129) | 0.0 | 26/46(57%) | 0/46(0%) | Plus/Minus |
Query 8 QSFN*VIHNNHTMPNT*GLIYSFKQSRN*VSHLVLISNQEPHTVVV 145 Q FN*+IHN MPNT*GLI FK + N* SHL+L+ +QE +T+++ Subject 6463 QCFN*IIHNTQIMPNT*GLINRFK*A*N*ASHLMLVPDQESNTIIM 6600
Range 4: 6431 to 6601 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.8 bits(109) | 0.0 | 32/57(56%) | 0/57(0%) | Plus/Minus |
Query 7 TKL*LSYS**SHHAKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQLLLHSSFQ 177 T L*L+YS* S++AK+LRPN LQ KLSISS A *P H+ + LL SSFQ Subject 6431 TML*LNYS*YSNNAKYLRPNQSLQIGLKLSISSYACS*PRI*HNYNGPPLLPRSSFQ 6601
Range 5: 6429 to 6602 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
49.2 bits(101) | 0.0 | 31/58(53%) | 0/58(0%) | Minus/Plus |
Query 6 N*NDE*RRS*SALQLCAVPG*K*AQDEILNFWIV*SYRLGLKCLAWCDYYE*LS*SFV 179 +*ND+ RS L LC + G + A DE+LNF +*S LGLK LA +YYE* S*S V Subject 6429 H*NDDRGRSGGPL*LC*ILGQEQA*DEMLNFRPI*SD*LGLKYLALFEYYE*FS*SIV 6602
Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome
Sequence ID: JX559646.1 Length: 8726 Number of Matches: 5
Range 1: 6427 to 6606 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
126.2 bits(269) | 0.0 | 53/60(88%) | 0/60(0%) | Minus/Plus |
Query 2 SIEMMNEEEVEAHYNCVRFLVRNKHKMRYSISGLFEAID*ALSVWHGVIIMNNLVKALST 181 SIEMM EEEVEAHYNCVRFLVRNKHKMR SISGLFEA+D*ALS+WH + IMNNLVKALST Subject 6427 SIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAVD*ALSIWHCLSIMNNLVKALST 6606
Range 2: 6429 to 6605 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
105.1 bits(223) | 0.0 | 48/59(81%) | 0/59(0%) | Plus/Minus |
Query 3 VDKALTKLFIIITPCQTLKA*SIASNNPEIEYLILCLFLTRNRTQL*CASTSSSFIISI 179 VD ALTKLFII+ CQ LKA*S ASN PEIE+LILCLFLTRN TQL*CASTSSS IIS+ Subject 6429 VDNALTKLFIILKQCQILKA*STASNRPEIEHLILCLFLTRNLTQL*CASTSSSVIISM 6605
Range 3: 6463 to 6600 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
67.0 bits(140) | 0.0 | 29/46(63%) | 0/46(0%) | Plus/Minus |
Query 8 QSFN*VIHNNHTMPNT*GLIYSFKQSRN*VSHLVLISNQEPHTVVV 145 Q FN +IHN TMPNT*GLI FK + N* HL+L+ N EPHT+VV Subject 6463 QCFNQIIHNTQTMPNT*GLINRFK*A*N*APHLMLVPN*EPHTIVV 6600
Range 4: 6435 to 6602 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.8 bits(109) | 0.0 | 30/56(54%) | 0/56(0%) | Minus/Plus |
Query 6 NDE*RRS*SALQLCAVPG*K*AQDEILNFWIV*SYRLGLKCLAWCDYYE*LS*SFV 173 ND+ LQLC VP *+ A DE+LNF +*S LGLK LA +YYE* *S V Subject 6435 NDDRGGGGGTLQLCEVPS*EQA*DEVLNFRPI*SG*LGLKYLALFEYYE*FG*SIV 6602
Nucleotide Sequence (523 letters)
Query ID: | ds2016-133_14 |
Query definition: | No definition line |
Query length: | 603 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
342.9 | 1983.0 | 27% | 1.837e-92 | 85% | AY368590.1 | |
289.3 | 1193.9 | 33% | 4.874e-86 | 47% | KR054734.1 | |
344.7 | 1979.3 | 27% | 5.157e-93 | 85% | KX274275.1 | |
288.8 | 1351.5 | 35% | 6.687e-86 | 53% | KR528585.1 | |
292.5 | 1243.9 | 33% | 5.331e-87 | 48% | KX958435.1 |
Alignments
Rupestris stem pitting associated virus strain Syrah, complete genome
Sequence ID: AY368590.1 Length: 8742 Number of Matches: 8
Range 1: 5074 to 5562 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
342.9 bits(742) | 0.0 | 141/163(87%) | 0/163(0%) | Plus/Minus |
Query 3 FMHQVCIVACIQWDLRKEGVQ*KFPIWLCAP*FCSFNLRLREFKTFPDSHEEGH*IITFMSWIYAFKSFTCIAQLLAFSTPVFIKELLGRFITTSHFTMFLQRHLSNPPGPG*FQVT*WDVGFEPFLIRALSFKFLNFAILILAKEKHDL*PRITTQLLRPHN 491 FMHQVCIVACIQWDLRKE V+*KFPIWLCAP FCSFNLRLREFKTFPDSHEEGH*IITFMSWIYAFKSFTCIAQ LA STP+FIKELLGRFITTSHFT+FLQ HLSNPPGP *FQ+T*WD+GF+PFLIRA KFLN AILILA EKHDL*PRITT+L H+ Subject 5074 FMHQVCIVACIQWDLRKESVK*KFPIWLCAPQFCSFNLRLREFKTFPDSHEEGH*IITFMSWIYAFKSFTCIAQFLASSTPMFIKELLGRFITTSHFTVFLQCHLSNPPGPC*FQIT*WDMGFKPFLIRAFRLKFLNLAILILA*EKHDL*PRITTKLFLSHS 5562
Range 2: 5066 to 5560 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
338.3 bits(732) | 0.0 | 141/165(85%) | 0/165(0%) | Plus/Minus |
Query 5 HAPGLHCGLHSVGPSKGRCPVKISHMALRALILQLQLEASRI*DVS*QP*GRSLNHYLYVLDICFQIFHMHCSIARFFHTCVHQRTVGSFHNHIALHDVPSTPSFQPTWPWLIPSYLMGCGF*TIPHSSTQFQVPQLRNPHLGQGKA*PLAKDHHTASPPSQLQT 499 HA GLHCGLHSVGPSKG+C VKISHMALRA ILQLQLEASRI*DVS*QP*GRSLNHYLYVLDICFQIFHMHCSI+RFFHT VHQRTVGSFHNHI+LH VPS PSFQPTWP LIP YLMG GF*TIPHSS Q QVPQ RNPHLG KA*PLAKDHH A P + L + Subject 5066 HASGLHCGLHSVGPSKGKCQVKISHMALRASILQLQLEASRI*DVS*QP*GRSLNHYLYVLDICFQIFHMHCSISRFFHTYVHQRTVGSFHNHISLHGVPSMPSFQPTWPLLIPDYLMGYGF*TIPHSSIQTQVPQPRNPHLGLRKA*PLAKDHHKAFPLALLHS 5560
Range 3: 5188 to 5562 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
303.5 bits(656) | 0.0 | 122/125(98%) | 0/125(0%) | Minus/Plus |
Query 3 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGKSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLVHE 377 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCG+SE+LSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANL+HE Subject 5188 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEKLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMHE 5562
Range 4: 5077 to 5139 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.3 bits(110) | 0.0 | 20/21(95%) | 0/21(0%) | Minus/Plus |
Query 426 VRAEKLCGDPWLKVMLFLGQD 488 VR EKLCGDPWLKVMLFLGQD Subject 5077 VREEKLCGDPWLKVMLFLGQD 5139
Range 5: 5084 to 5563 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
315.9 bits(683) | 0.0 | 141/160(88%) | 0/160(0%) | Minus/Plus |
Query 2 RRSCVVILG*RSCFSLAKMRIAKLRNLKLSARMRNGSKPTSH*VTWNQPGPGGLERWR*RNIVKCDVVMKRPNSSLMNTGVEKASN*AMHVKDLKAYIQDIKVMIQ*PSSWLSGNVLNSRSLKLKLQN*GAQSHMGNFYWTPSFRRSH*MQATMQTWCMK 481 R+S VVILG*RSCFS AKMRIA+LRNL L+ARMRNG KP SH*V WNQ GPGGLERW *RN VK DVVMKRPNSSLMN GVE+A N*AMHVKDLKAYIQDIKVMIQ*PSSWLSGNVLNSRSLKLKLQN*GAQSHMGNFY T SFRRSH*MQATMQT CMK Subject 5084 RKSFVVILG*RSCFS*AKMRIARLRNLSLNARMRNGLKPISH*VIWNQQGPGGLERWH*RNTVK*DVVMKRPNSSLMNIGVEEARN*AMHVKDLKAYIQDIKVMIQ*PSSWLSGNVLNSRSLKLKLQN*GAQSHMGNFYLTLSFRRSH*MQATMQT*CMK 5563
Range 6: 5085 to 5564 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
309.9 bits(670) | 0.0 | 139/160(87%) | 0/160(0%) | Minus/Plus |
Query 1 GEAVW*SLAKGHAFPWPR*GLRS*GT*N*VLE*GMVQNPHPIK*LGINQGQVGWKDGVEGTS*SAMWL*NDPTVL**TQVWKKRAIEQCM*KI*KHISKT*R**FSDLPHGCQETS*ILEASS*SCKIKARKAIWEIFTGHLPFEGPTECKPQCKPGA*N 480 G+A+W*SLAKGHAF PR*GLR *GT* *+LE*GMV NP+PIK* GIN+GQVGWKDG+EGT *S MWL*NDPTVL**T VWKKR IEQCM*KI*KHISKT*R**FSDLPHGCQETS*ILEASS*SCKI+ARKAIWEIFT H PFEGPTECKPQCKP A*+ Subject 5085 GKALW*SLAKGHAFLRPR*GLRG*GT*V*MLE*GMV*NPYPIK*SGINKGQVGWKDGIEGTP*SEMWL*NDPTVL**T*VWKKREIEQCM*KI*KHISKT*R**FSDLPHGCQETS*ILEASS*SCKIEARKAIWEIFT*HFPFEGPTECKPQCKPDA*S 5564
Range 7: 5187 to 5561 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
290.2 bits(627) | 0.0 | 119/125(95%) | 0/125(0%) | Plus/Minus |
Query 4 SCTRFALWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFENLRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLFPHLCSSKNCWVVS*PHRTSRCSFNAIFPTHLALVDSKLLNGMWVLNH 378 SC RFALWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFENLRRFLTAMRKVTESLPLCLGYMLSNLSHALLN SL PHLCSSKNCWVVS*PH TSRCSFNAIFPTHLALVDS+LLNG+WVLNH Subject 5187 SCIRFALWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFENLRRFLTAMRKVTESLPLCLGYMLSNLSHALLNFSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSRLLNGIWVLNH 5561
Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome
Sequence ID: KR054734.1 Length: 8753 Number of Matches: 8
Range 1: 5188 to 5562 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
289.3 bits(625) | 0.0 | 117/125(94%) | 0/125(0%) | Minus/Plus |
Query 3 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGKSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLVHE 377 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHR G EQLSNACERFESIYPRHKGNDS+TFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHN N+ +E Subject 5188 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVNMFNE 5562
Range 2: 5077 to 5139 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.3 bits(110) | 0.0 | 20/21(95%) | 0/21(0%) | Minus/Plus |
Query 426 VRAEKLCGDPWLKVMLFLGQD 488 VR EKLCGDPWLKVMLFLGQD Subject 5077 VREEKLCGDPWLKVMLFLGQD 5139
Range 3: 5187 to 5543 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
217.8 bits(469) | 0.0 | 93/119(78%) | 0/119(0%) | Plus/Minus |
Query 22 LWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFENLRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLFPHLCSSKNCWVVS*PHRTSRCSFNAIFPTHLALVDSKLLNGMWVLNH 378 LWLAF+GTF++ VSS+NFP GFARL+FAAST GFEN +RF TA++KV ESLPLCLG MLSNLS ALLNCS P LCSSKNC VVS P RTSRCSF AIFPTHLALVDS+LL GM VLNH Subject 5187 LWLAFNGTFDKNVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSNLSQALLNCSPIPPLCSSKNC*VVSYPQRTSRCSFKAIFPTHLALVDSRLLKGMCVLNH 5543
Range 4: 5082 to 5120 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
25.8 bits(50) | 0.0 | 9/13(69%) | 0/13(0%) | Plus/Minus |
Query 445 MTFSQGSPHSFSA 483 +T S GSPHSFS+ Subject 5082 ITLSHGSPHSFSS 5120
Range 5: 5069 to 5563 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
161.4 bits(346) | 0.0 | 82/165(50%) | 0/165(0%) | Minus/Plus |
Query 2 LEL*GRRSCVVILG*RSCFSLAKMRIAKLRNLKLSARMRNGSKPTSH*VTWNQPGPGGLERWR*RNIVKCDVVMKRPNSSLMNTGVEKASN*AMHVKDLKAYIQDIKVMIQ*PSSWLSGNVLNSRSLKLKLQN*GAQSHMGNFYWTPSFRRSH*MQATMQTWCMK 496 +++*GR++CVV G + CFS A+M+I KL++L LS +M+NGSK T * W+QPG G +W *++ V+C M++ +SS MNT ASN*AM VKDLKA+ DI+VMI WLSG+V + +S K +LQ+*GAQS M NF T ++ H*M ATM M+ Subject 5069 MKV*GRKNCVVTHGLKLCFS*ARMKIVKLKSLSLSVQMKNGSKHTYP*AIWSQPGLDGSGKWP*KSTVRCVAGMRQLSSSSMNTEGVWASN*AMLVKDLKAFTLDIRVMIPSLF*WLSGSV*SFQSHKWRLQS*GAQSLMENFCLTHFCQKFH*MLATMSICSMR 5563
Range 6: 5077 to 5559 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
159.6 bits(342) | 0.0 | 79/161(49%) | 0/161(0%) | Plus/Minus |
Query 6 MHQVCIVACIQWDLRKEGVQ*KFPIWLCAP*FCSFNLRLREFKTFPDSHEEGH*IITFMSWIYAFKSFTCIAQLLAFSTPVFIKELLGRFITTSHFTMFLQRHLSNPPGPG*FQVT*WDVGFEPFLIRALSFKFLNFAILILAKEKHDL*PRITTQLLRPH 488 + + IVA IQW+ ++ V+ KF I LCAP* CS +L L + T PDSH + IIT MS + AFKSFT IA LLA + VFI+ELL I +H T+ Q H +P PG* Q+ V FEPF I L K NF I ILA EKH+ P +TTQ PH Subject 5077 IEHIDIVASIQWNF*QKCVKQKFSIRLCAP*LCSLHLWL*KL*TLPDSH*KSDGIITLMSRVNAFKSFTSIA*LLAHTPSVFIEELLSCLIPATHLTVLFQGHFPDPSSPG*LQIAQGYVCFEPFFI*TLRLKLFNFTIFILA*EKHNFKPWVTTQFFLPH 5559
Range 7: 5072 to 5545 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
147.7 bits(316) | 0.0 | 76/158(48%) | 0/158(0%) | Plus/Minus |
Query 20 HCGLHSVGPSKGRCPVKISHMALRALILQLQLEASRI*DVS*QP*GRSLNHYLYVLDICFQIFHMHCSIARFFHTCVHQRTVGSFHNHIALHDVPSTPSFQPTWPWLIPSYLMGCGF*TIPHSSTQFQVPQLRNPHLGQGKA*PLAKDHHTASPPSQL 493 HCG HS+ C +I H ALRAL LQ L A + + S QP + NHY YV CFQIFH HC IAR + CVH+RT H A H S P +P PWL P C F*TI H +TQ Q QL N H G KA* A HHT PPS L Subject 5072 HCG*HSMELLTKMCQAEIFHKALRALALQPPLVALKTLNASGQPLKK*WNHYPYV*GKCFQIFHKHCLIARPYPLCVHRRTAELSHTRNAPHGALSRPFSRPI*PWLTPDCSRVCVF*TILHLNTQTQALQLHNLHPGLRKA*L*AMGHHTVFPPSHL 5545
Range 8: 5076 to 5549 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
139.0 bits(297) | 0.0 | 75/158(47%) | 0/158(0%) | Minus/Plus |
Query 16 CEGGEAVW*SLAKGHAFPWPR*GLRS*GT*N*VLE*GMVQNPHPIK*LGINQGQVGWKDGVEGTS*SAMWL*NDPTVL**TQVWKKRAIEQCM*KI*KHISKT*R**FSDLPHGCQETS*ILEASS*SCKIKARKAIWEIFTGHLPFEGPTECKPQCK 489 CEGG+ VW* +A +AF P * L S* * *V +* MVQN H ++ G+NQG +G ++G+E * A+ +*++ VL *TQ RAI+QC+*KI*KH+ T* **F +GC E + +A+S CK KARKA+W+I H+ + EC PQC+ Subject 5076 CEGGKTVW*PMA*SYAFLRPG*RL*S*RA*V*VFK*RMVQNTHTLEQSGVNQG*MGRENGLERAP*GALRV*DNSAVLR*TQRGYGRAIKQCL*KI*KHLP*T*G**FHHFFNGCPEAFKVFKATSGGCKAKARKALWKISA*HIFVKSSIEC*PQCQ 5549
Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome
Sequence ID: KX274275.1 Length: 8724 Number of Matches: 8
Range 1: 5066 to 5557 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
344.7 bits(746) | 0.0 | 141/164(86%) | 0/164(0%) | Plus/Minus |
Query 8 APGLHCGLHSVGPSKGRCPVKISHMALRALILQLQLEASRI*DVS*QP*GRSLNHYLYVLDICFQIFHMHCSIARFFHTCVHQRTVGSFHNHIALHDVPSTPSFQPTWPWLIPSYLMGCGF*TIPHSSTQFQVPQLRNPHLGQGKA*PLAKDHHTASPPSQLQT 499 A GLHCGLHSV P KG+C VK SHMALRALILQL+LEA +I*DVS*QP* RSLNHYLYVLDICFQIFHMHCSIARFFHTCVHQRTVGSFHNHI+LH VPSTPSFQPTWPW IPSYLMG GF*TIPH + Q Q PQLRNPHLGQGKA*PLAKDHHTASP S L + Subject 5066 ASGLHCGLHSVEPLKGKCQVKTSHMALRALILQLRLEALKI*DVS*QP*ERSLNHYLYVLDICFQIFHMHCSIARFFHTCVHQRTVGSFHNHISLHGVPSTPSFQPTWPWSIPSYLMGYGF*TIPHLNIQTQAPQLRNPHLGQGKA*PLAKDHHTASPLSPLHS 5557
Range 2: 5188 to 5562 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
300.3 bits(649) | 0.0 | 122/125(98%) | 0/125(0%) | Minus/Plus |
Query 3 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGKSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLVHE 377 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCG+SEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANL+ E Subject 5188 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGRSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLMLE 5562
Range 3: 5077 to 5139 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.3 bits(110) | 0.0 | 20/21(95%) | 0/21(0%) | Minus/Plus |
Query 426 VRAEKLCGDPWLKVMLFLGQD 488 VR EKLCGDPWLKVMLFLGQD Subject 5077 VREEKLCGDPWLKVMLFLGQD 5139
Range 4: 5077 to 5562 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
331.4 bits(717) | 0.0 | 138/162(85%) | 0/162(0%) | Plus/Minus |
Query 3 FMHQVCIVACIQWDLRKEGVQ*KFPIWLCAP*FCSFNLRLREFKTFPDSHEEGH*IITFMSWIYAFKSFTCIAQLLAFSTPVFIKELLGRFITTSHFTMFLQRHLSNPPGPG*FQVT*WDVGFEPFLIRALSFKFLNFAILILAKEKHDL*PRITTQLLRPH 488 F HQVCIVACIQW+L KE V+*K PIWLCAP*FCSF+LRL +FKTFP+SHE+GH*IITFMSWIYAFKSFTCIAQLLA STPVFIKELLGRFITTSHFT+FLQRHLSNPPGPG FQVT*WD+GF+PFLI K LNFAILILAKEKHDL*PRITTQLL H Subject 5077 FKHQVCIVACIQWNL*KESVK*KLPIWLCAP*FCSFDLRL*KFKTFPNSHEKGH*IITFMSWIYAFKSFTCIAQLLASSTPVFIKELLGRFITTSHFTVFLQRHLSNPPGPGRFQVT*WDMGFKPFLI*TFRLKLLNFAILILAKEKHDL*PRITTQLLLSH 5562
Range 5: 5079 to 5564 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
312.6 bits(676) | 0.0 | 139/162(86%) | 0/162(0%) | Minus/Plus |
Query 1 EGGEAVW*SLAKGHAFPWPR*GLRS*GT*N*VLE*GMVQNPHPIK*LGINQGQVGWKDGVEGTS*SAMWL*NDPTVL**TQVWKKRAIEQCM*KI*KHISKT*R**FSDLPHGCQETS*ILEASS*SCKIKARKAIWEIFTGHLPFEGPTECKPQCKPGA*N 486 E GEAVW*SLAKGHAFPWPR*GLRS*G * *+ +*GMV NP+PIK*LGI+QGQVGWKDGVEGT *S MWL*NDPTVL**TQVWKKRAIEQCM*KI*KHISKT*R**FSDL HGC ETS*I +ASS SCKIKARKAIWE+FT H PF+G TECKPQCKP A*+ Subject 5079 ERGEAVW*SLAKGHAFPWPR*GLRS*GA*V*MFK*GMV*NPYPIK*LGIDQGQVGWKDGVEGTP*SEMWL*NDPTVL**TQVWKKRAIEQCM*KI*KHISKT*R**FSDLSHGC*ETS*IFKASSRSCKIKARKAIWEVFT*HFPFKGSTECKPQCKPDA*S 5564
Range 6: 5084 to 5563 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
312.2 bits(675) | 0.0 | 137/160(86%) | 0/160(0%) | Minus/Plus |
Query 2 RRSCVVILG*RSCFSLAKMRIAKLRNLKLSARMRNGSKPTSH*VTWNQPGPGGLERWR*RNIVKCDVVMKRPNSSLMNTGVEKASN*AMHVKDLKAYIQDIKVMIQ*PSSWLSGNVLNSRSLKLKLQN*GAQSHMGNFYWTPSFRRSH*MQATMQTWCMK 481 RRSCVVILG*RSCFSLAKMRIAKLR+L L+ +MRNG KP SH*VTWN+PGPGGLERWR*RN VK DVVMKRPNSSLMNTGVE+ASN*AMHVKDLKAYIQDIKVMIQ*P SWL GNVLN +SLK KLQN*GAQSHMG+FY T SF+R H*MQATMQT C+K Subject 5084 RRSCVVILG*RSCFSLAKMRIAKLRSLSLNVQMRNGLKPISH*VTWNRPGPGGLERWR*RNTVK*DVVMKRPNSSLMNTGVEEASN*AMHVKDLKAYIQDIKVMIQ*PFSWLLGNVLNFQSLKSKLQN*GAQSHMGSFYLTLSFQRFH*MQATMQT*CLK 5563
Range 7: 5187 to 5561 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
292.0 bits(631) | 0.0 | 120/125(96%) | 0/125(0%) | Plus/Minus |
Query 4 SCTRFALWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFENLRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLFPHLCSSKNCWVVS*PHRTSRCSFNAIFPTHLALVDSKLLNGMWVLNH 378 S RFALWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFENLRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSL PHLCSSKNCWVVS*PH TSRCSFNAIFPTHLALVDSKLLNG+WVLNH Subject 5187 SSIRFALWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFENLRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLLPHLCSSKNCWVVS*PHLTSRCSFNAIFPTHLALVDSKLLNGIWVLNH 5561
Grapevine rupestris stem pitting associated virus isolate Tannat Rspav1, complete genome
Sequence ID: KR528585.1 Length: 8595 Number of Matches: 8
Range 1: 5170 to 5544 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
288.8 bits(624) | 0.0 | 116/125(93%) | 0/125(0%) | Minus/Plus |
Query 3 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGKSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLVHE 377 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYE TQQFFDEHR G EQLSNACERFESIYPRHKGNDS+TFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLD+FLSKVPLNASHN+N+ HE Subject 5170 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKVPLNASHNSNMFHE 5544
Range 2: 5059 to 5121 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.3 bits(110) | 0.0 | 20/21(95%) | 0/21(0%) | Minus/Plus |
Query 426 VRAEKLCGDPWLKVMLFLGQD 488 VR EKLCGDPWLKVMLFLGQD Subject 5059 VREEKLCGDPWLKVMLFLGQD 5121
Range 3: 5169 to 5519 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
213.2 bits(459) | 0.0 | 91/117(78%) | 0/117(0%) | Plus/Minus |
Query 28 LAFSGTFERKVSSKNFPYGFARLNFAAST*GFENLRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLFPHLCSSKNCWVVS*PHRTSRCSFNAIFPTHLALVDSKLLNGMWVLNH 378 LAFSGT +RK S++NFPYG AR + AAST GFENLRRF TA+RKV ES PLCLG MLSNLSHALL+CS P LCSSKNC V S*P RTSRCSF AI PTHLALVDS+LL GMWVLNH Subject 5169 LAFSGTLDRKESNRNFPYGLARRSLAASTWGFENLRRFRTAIRKVIESFPLCLG*MLSNLSHALLSCSPVPPLCSSKNC*VTS*PQRTSRCSFKAILPTHLALVDSRLLRGMWVLNH 5519
Range 4: 5064 to 5102 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
27.6 bits(54) | 0.0 | 9/13(69%) | 0/13(0%) | Plus/Minus |
Query 445 MTFSQGSPHSFSA 483 MTF+ GSPH+FS+ Subject 5064 MTFNHGSPHNFSS 5102
Range 5: 5059 to 5544 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
219.6 bits(473) | 0.0 | 96/162(59%) | 0/162(0%) | Plus/Minus |
Query 3 FMHQVCIVACIQWDLRKEGVQ*KFPIWLCAP*FCSFNLRLREFKTFPDSHEEGH*IITFMSWIYAFKSFTCIAQLLAFSTPVFIKELLGRFITTSHFTMFLQRHLSNPPGPG*FQVT*WDVGFEPFLIRALSFKFLNFAILILAKEKHDL*PRITTQLLRPH 488 FM V I+ I WD R++GV *+ PIWL P*F SFNL LR+F+T DSH+EG+*II+FM W+ AFK TCIAQLL ST + IKELL FITT+H M Q H ++PPGPG* Q+T DVGF+PF I A NF ILIL +EKHD *P +TTQLL P+ Subject 5059 FMKHVGIMTSI*WDFRQKGV**ELPIWLGPP*FGSFNLGLRKFETLSDSHKEGY*IISFMPWVNAFKPLTCIAQLLTSSTSMLIKELLSHFITTTHLPMLFQGHFTHPPGPG*LQITQGDVGFKPFFI*AF*LHLFNFTILILTQEKHDF*PWVTTQLLLPN 5544
Range 6: 5063 to 5545 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
201.3 bits(433) | 0.0 | 95/161(59%) | 0/161(0%) | Minus/Plus |
Query 2 GRRSCVVILG*RSCFSLAKMRIAKLRNLKLSARMRNGSKPTSH*VTWNQPGPGGLERWR*RNIVKCDVVMKRPNSSLMNTGVEKASN*AMHVKDLKAYIQDIKVMIQ*PSSWLSGNVLNSRSLKLKLQN*GAQSHMGNFYWTPSFRRSH*MQATMQTWCMK 484 GRRSCVV G*+SCFS KMRI KL+ +A+M+NG KPTS *V W+QPGPGG +W *++I +C VVMK N+SLM+ VE SN*AMHV+ LKA+ Q IK MIQ*PS WLS +V N RS +LKL N G SHMG+ Y TP +SH*M + T MK Subject 5063 GRRSCVVTHG*KSCFSWVKMRIVKLKRWSQNAQMKNGLKPTSP*VIWSQPGPGGWVKWP*KSIGRCVVVMK*LNNSLMSIEVELVSN*AMHVRGLKAFTQGIKEMIQ*PSLWLSESVSNFRSPRLKLPNYGGPSHMGSSY*TPFCLKSH*MLVIIPTCFMK 5545
Range 7: 5048 to 5515 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
186.6 bits(401) | 0.0 | 86/156(55%) | 0/156(0%) | Plus/Minus |
Query 32 HSVGPSKGRCPVKISHMALRALILQLQLEASRI*DVS*QP*GRSLNHYLYVLDICFQIFHMHCSIARFFHTCVHQRTVGSFHNHIALHDVPSTPSFQPTWPWLIPSYLMGCGF*TIPHSSTQFQVPQLRNPHLGQGKA*PLAKDHHTASPPSQLQT 499 H VG R + SHMA A++ QLQ AS+I*D QP*GR LNH+LY L CFQ HMHCS+A FH HQR V S HNH A D S P + PTWPWL P Y GCGF*TI H S QL NPHL GKA* L HHT SPP L + Subject 5048 HLVGL*TERSLIGTSHMAWPAVVWQLQPGASKI*DAFGQP*GRLLNHFLYALGKCFQTSHMHCSVAHQFHLYAHQRIVESLHNHNAPPDALSRPFYPPTWPWLTPDYSGGCGF*TILHLSILTPSLQLHNPHLDPGKA*LLTMGHHTTSPP*HLHS 5515
Range 8: 5058 to 5516 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
161.0 bits(345) | 0.0 | 81/153(53%) | 0/153(0%) | Minus/Plus |
Query 31 CEGGEAVW*SLAKGHAFPWPR*GLRS*GT*N*VLE*GMVQNPHPIK*LGINQGQVGWKDGVEGTS*SAMWL*NDPTVL**TQVWKKRAIEQCM*KI*KHISKT*R**FSDLPHGCQETS*ILEASS*SCKIKARKAIWEIFTGHLPFEGPTEC 489 C GGE VW* + K HAFP R*GL S* +L+* MV NPHP +* G+NQGQVG +G+E S A+WL*+D T+L** W A EQCM*++*KH+ K *R *F++LP+GC + S I EA *SC+ A +AIWE+ L PT+C Subject 5058 C*GGEVVW*PMVKSHAFPGSR*GL*S*RDGVRMLK*RMV*NPHPPE*SGVNQGQVGG*NGLERASGGALWL*SDSTIL**A*RWNW*ATEQCM*EV*KHLPKA*RK*FNNLPYGCPKASQIFEAPG*SCQTTAGQAIWEVPIRLLSV*SPTKC 5516
Grapevine rupestris stem pitting associated virus isolate CS BR, complete genome
Sequence ID: KX958435.1 Length: 8743 Number of Matches: 8
Range 1: 5189 to 5563 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
292.5 bits(632) | 0.0 | 118/125(94%) | 0/125(0%) | Minus/Plus |
Query 3 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRCGKSEQLSNACERFESIYPRHKGNDSVTFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNANLVHE 377 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHR G EQLSNACERFESIYPRHKGNDS+TFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHN N+ HE Subject 5189 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVNMFHE 5563
Range 2: 5078 to 5140 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.3 bits(110) | 0.0 | 20/21(95%) | 0/21(0%) | Minus/Plus |
Query 426 VRAEKLCGDPWLKVMLFLGQD 488 VR EKLCGDPWLKVMLFLGQD Subject 5078 VREEKLCGDPWLKVMLFLGQD 5140
Range 3: 5188 to 5544 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
222.4 bits(479) | 0.0 | 96/119(81%) | 0/119(0%) | Plus/Minus |
Query 22 LWLAFSGTFERKVSSKNFPYGFARLNFAAST*GFENLRRFLTAMRKVTESLPLCLGYMLSNLSHALLNCSLFPHLCSSKNCWVVS*PHRTSRCSFNAIFPTHLALVDSKLLNGMWVLNH 378 LWLAF+GTF+RKVSS+NFP GFARL+FAAST GFEN RRF TA++KV ESLPLCLG MLS S ALLNCS P LCSSKNC VVS PHRTSRCSF AIFPTHLALVDSKLL GM VLNH Subject 5188 LWLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFRRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPIPPLCSSKNC*VVSYPHRTSRCSFKAIFPTHLALVDSKLLKGMCVLNH 5544
Range 4: 5083 to 5121 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
28.6 bits(56) | 0.0 | 10/13(77%) | 0/13(0%) | Plus/Minus |
Query 445 MTFSQGSPHSFSA 483 +TFS GSPHSFS+ Subject 5083 ITFSHGSPHSFSS 5121
Range 5: 5090 to 5560 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
172.4 bits(370) | 0.0 | 85/157(54%) | 0/157(0%) | Plus/Minus |
Query 6 MHQVCIVACIQWDLRKEGVQ*KFPIWLCAP*FCSFNLRLREFKTFPDSHEEGH*IITFMSWIYAFKSFTCIAQLLAFSTPVFIKELLGRFITTSHFTMFLQRHLSNPPGPG*FQVT*WDVGFEPFLIRALSFKFLNFAILILAKEKHDL*PRITTQL 476 M + IVA I WD R E V+ +FPI LC P* SF+L L + + F D H +G+ +I +S I AFK+FT IA LLA S PVFI+ELL FI TS+ T+ LQ H NP PG* Q+ V FEPF I L K NF +LILA EKH+ *PRITTQL Subject 5090 MKHINIVASI*WDFR*ESVKQEFPIRLCTP*LRSFHLWL*KLQAFSDGH*KGNGVIALVSRINAFKTFTGIA*LLAHSPPVFIEELLSCFIPTSYLTVLLQGHFPNPSSPG*LQIAQGYVCFEPFFI*TLRLKLFNFTVLILA*EKHNF*PRITTQL 5560
Range 6: 5085 to 5546 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
166.0 bits(356) | 0.0 | 83/154(54%) | 0/154(0%) | Minus/Plus |
Query 20 RRSCVVILG*RSCFSLAKMRIAKLRNLKLSARMRNGSKPTSH*VTWNQPGPGGLERWR*RNIVKCDVVMKRPNSSLMNTGVEKASN*AMHVKDLKAYIQDIKVMIQ*PSSWLSGNVLNSRSLKLKLQN*GAQSHMGNFYWTPSFRRSH*MQATM 481 R+SCVVI G*+ CFS A+MR KL++L LS +M+NGSK T * W+QPG GL +W *R+ V+ DV MK+ ++S MNTG E ASN*AM V LKA+I D + M P W S N + +S + KL++*G QS MGN T S+R+SH*M ATM Subject 5085 RKSCVVIRG*KLCFS*ARMRTVKLKSLSLSVQMKNGSKHTYP*AIWSQPGLDGLGKWP*RSTVRYDVGMKQLSNSSMNTGGEWASN*AMPVNVLKAFILDTRAMTPLPF*WPSENA*SFQSHRWKLRS*GVQSLMGNSCLTLSYRKSH*MLATM 5546
Range 7: 5064 to 5546 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
155.0 bits(332) | 0.0 | 78/161(48%) | 0/161(0%) | Plus/Minus |
Query 20 HCGLHSVGPSKGRCPVKISHMALRALILQLQLEASRI*DVS*QP*GRSLNHYLYVLDICFQIFHMHCSIARFFHTCVHQRTVGSFHNHIALHDVPSTPSFQPTWPWLIPSYLMGCGF*TIPHSSTQFQVPQLRNPHLGQGKA*PLAKDHHTASPPSQLQTH 502 HCG H +G S G+C ISH AL AL QL A + V +P R +H V D CFQ H HC IAR F CVH+R FH HI H PS P QP PWL P+ C F*TI H +TQ Q QL +PH G KA* LA DHHTA P L ++ Subject 5064 HCG*HLMGLSIGKCQAGISHKALHALASQLPPVALKTSGVFGRPLKR*WSHCPCV*DKCFQNVHRHCLIARPFPPCVHRRIAELFHTHIVPHGAPSRPFSQPI*PWLTPNCSRVCVF*TILHLNTQTQALQLHSPHPGLRKA*LLATDHHTAFPLVHLHSY 5546
Range 8: 5077 to 5547 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
153.7 bits(329) | 0.0 | 77/157(49%) | 0/157(0%) | Minus/Plus |
Query 19 CEGGEAVW*SLAKGHAFPWPR*GLRS*GT*N*VLE*GMVQNPHPIK*LGINQGQVGWKDGVEGTS*SAMWL*NDPTVL**TQVWKKRAIEQCM*KI*KHISKT*R**FSDLPHGCQETS*ILEASS*SCKIKARKAIWEIFTGHLPFEGPTECKPQC 489 C G+AVW*S+AK +AF P *GL S* * *V +* MVQN H ++ G+NQG +GW++G+EG * MW+*N+ +L *TQ RAI+QC+* *KH+S T * L +G +T + +A+ SC+ KA KA+WEI H P E P +C PQC Subject 5077 CTRGKAVW*SVAKSYAFLRPG*GL*S*RA*V*VFK*RMVQNTHTLEQFGVNQG*MGWENGLEGAP*GTMWV*NNSAILR*TQGGNGRAIKQCL*TF*KHLS*TQGQ*LHYLFNGRPKTPEVFKATGGSCEAKACKALWEIPA*HFPIESPIKC*PQC 5547
Nucleotide Sequence (357 letters)
Query ID: | ds2016-133_14 |
Query definition: | No definition line |
Query length: | 603 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
284.7 | 1302.4 | 28% | 3.312e-75 | 72% | KX274275.1 | |
282.9 | 1318.4 | 28% | 1.18e-74 | 76% | AY368590.1 | |
253.5 | 788.7 | 26% | 7.936e-66 | 40% | KR054735.1 | |
247.6 | 770.5 | 18% | 4.853e-64 | 47% | AY881627.1 | |
244.8 | 787.8 | 18% | 3.263e-63 | 48% | KX274277.1 |
Alignments
Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome
Sequence ID: KX274275.1 Length: 8724 Number of Matches: 7
Range 1: 475 to 828 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
284.7 bits(615) | 0.0 | 117/118(99%) | 0/118(0%) | Plus/Plus |
Query 3 ISSSDKSNHVVSKKGIGDSDSLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVGSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLK 356 ISSSDKSNHV+SKKGIGDSDSLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVGSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLK Subject 475 ISSSDKSNHVISKKGIGDSDSLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVGSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLK 828
Range 2: 513 to 827 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.0 bits(489) | 0.0 | 100/105(95%) | 0/105(0%) | Minus/Minus |
Query 41 LSRYLLDSGCEYISHQLPSGAKSI*PSEILYW*AQGFRLSGEPTRISGGITAVARSMLGLTTSRKVMRSRIDQ*WISS*RKRFLAPVEITRGTNFLSESESPIPF 355 LS+YLLD+GCEYISHQLPSGAKSI PSEILYW*AQGF+LSGEPTRISGGITAVARSMLGLTTSRKVMRSRIDQ* ISS*RKRFLAPVEITRGTNFLSESESPIPF Subject 513 LSKYLLDNGCEYISHQLPSGAKSIWPSEILYW*AQGFKLSGEPTRISGGITAVARSMLGLTTSRKVMRSRIDQ**ISS*RKRFLAPVEITRGTNFLSESESPIPF 827
Range 3: 475 to 825 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
226.0 bits(487) | 0.0 | 93/117(79%) | 0/117(0%) | Minus/Minus |
Query 3 KQIPT*QWL*IHFTPITIRGKEHLTLRNSILVSPRI*AFRRANKDFRGYYSRCKKHVGSDHLQKGNEITYRPVMDLIMKEKISCTGGDYTRNQLFERVRITDPLLADNMVRLVTRAY 353 KQIPT*QWL*IHFTP+TIR KEHL LRNSILVSPR+*AFRRANKDFRGYYSRCKKHVG +H Q+G EITYRPVM+ IMK+KI CT D+TR+Q ERVRIT+ LLA++MVRL+TRAY Subject 475 KQIPT*QWL*IHFTPVTIRSKEHLALRNSILVSPRV*AFRRANKDFRGYYSRCKKHVGPNHFQEGYEITYRPVMNFIMKKKIPCTCRDHTRDQFLERVRITNSLLANDMVRLITRAY 825
Range 4: 473 to 826 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
211.4 bits(455) | 0.0 | 93/118(79%) | 0/118(0%) | Minus/Minus |
Query 1 *ADTYLTVVVNTFHTNYHPGQRAFDPQKFYTGKPKDLGFQESQQGFQGVLQPLQEACWV*PPPER**DHV*TSNGSHHEGKDFLHRWRLHEEPTF*ASQNHRSPSC*QHG*TCH*SLS 354 *A+TYLT+VVNTFHT+YHP QRAF PQKFYTGKPK L FQESQQGFQGVLQPLQEACW *P P R *DHV*TSN HHE KD LH R HE P *ASQNH+ PSC* HG*T H*SLS Subject 473 *ANTYLTMVVNTFHTSYHPEQRAFGPQKFYTGKPKGLSFQESQQGFQGVLQPLQEACWA*PLPGRL*DHV*TSNEFHHEEKDSLHL*RSHEGPIS*ASQNHQFPSC**HG*TYH*SLS 826
Range 5: 474 to 782 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
176.1 bits(378) | 0.0 | 80/103(78%) | 0/103(0%) | Plus/Plus |
Query 2 DKL**QV*PCCQQEGDR*F*LAQKVGSSCNLHRCKKSFPS**DPLLVYT*SHYLSGGGQTQHASCNGCNTP*NPCWLS*KPKSLGLPV*NF*GSNALCPGW*L 310 DKL** V*PC QEG+ *F*LAQ++G SC+L+RCK+SF S**+ LLVYT*SH L G G QHASCNGCNTP*NPCWLS*K K LGLPV*NF*G NALC GW*L Subject 474 DKL***V*PCH*QEGNW*F*LAQEIGPSCDLYRCKESFSS**NSLLVYT*SHNLPGSG*AQHASCNGCNTP*NPCWLS*KLKPLGLPV*NF*GPNALCSGW*L 782
Range 6: 473 to 673 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.9 bits(216) | 0.0 | 48/67(72%) | 0/67(0%) | Plus/Plus |
Query 1 **ALVTSLTMLSARRGSVILTRSKSWFLV*SPPVQEIFSFMMRSITGLYVISLPFWRWSDPTCFLQR 201 **ALV SLTM ARR VILTRS++W LV*S VQ IF FMM+ ITGLYVIS P W+W PTCFLQR Subject 473 **ALVISLTMSLARRELVILTRSRNWSLV*SLQVQGIFFFMMKFITGLYVIS*PSWKWLGPTCFLQR 673
Rupestris stem pitting associated virus strain Syrah, complete genome
Sequence ID: AY368590.1 Length: 8742 Number of Matches: 7
Range 1: 475 to 828 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
282.9 bits(611) | 0.0 | 117/118(99%) | 0/118(0%) | Plus/Plus |
Query 3 ISSSDKSNHVVSKKGIGDSDSLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVGSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLK 356 ISSSDKSNHVVSKKGIGDSDSLKKLVPRVIS GARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVGSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLK Subject 475 ISSSDKSNHVVSKKGIGDSDSLKKLVPRVISAGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVGSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLK 828
Range 2: 513 to 827 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
230.2 bits(496) | 0.0 | 99/105(94%) | 0/105(0%) | Minus/Minus |
Query 41 LSRYLLDSGCEYISHQLPSGAKSI*PSEILYW*AQGFRLSGEPTRISGGITAVARSMLGLTTSRKVMRSRIDQ*WISS*RKRFLAPVEITRGTNFLSESESPIPF 355 LS+YLLD+GCEYISHQLPSGAKSI PSEILYW*AQGF+LSGEPTRISGGITAVARS+LGLTTSRKVMRSRIDQ*WISS*RKRFLAP EITRGTNFLSESESPIPF Subject 513 LSKYLLDNGCEYISHQLPSGAKSIWPSEILYW*AQGFKLSGEPTRISGGITAVARSILGLTTSRKVMRSRIDQ*WISS*RKRFLAPAEITRGTNFLSESESPIPF 827
Range 3: 475 to 825 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.4 bits(490) | 0.0 | 94/117(80%) | 0/117(0%) | Minus/Minus |
Query 3 KQIPT*QWL*IHFTPITIRGKEHLTLRNSILVSPRI*AFRRANKDFRGYYSRCKKHVGSDHLQKGNEITYRPVMDLIMKEKISCTGGDYTRNQLFERVRITDPLLADNMVRLVTRAY 353 KQIPT*QWL*IHFTP+TIR KEHL LR+SILVSPRI*AFRRANKDFR Y+S CKKH+G +H Q+G+EITYRP+MDLIMK+KI CT GD+TRNQ E VRIT+ LLADNMVRLVTRAY Subject 475 KQIPT*QWL*IHFTPVTIRSKEHLALRDSILVSPRI*AFRRANKDFRRYHSCCKKHIGPNHFQEGDEITYRPIMDLIMKKKIPCTSGDHTRNQFLE*VRITNSLLADNMVRLVTRAY 825
Range 4: 473 to 826 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
214.1 bits(461) | 0.0 | 92/118(78%) | 0/118(0%) | Minus/Minus |
Query 1 *ADTYLTVVVNTFHTNYHPGQRAFDPQKFYTGKPKDLGFQESQQGFQGVLQPLQEACWV*PPPER**DHV*TSNGSHHEGKDFLHRWRLHEEPTF*ASQNHRSPSC*QHG*TCH*SLS 354 *A+TYLT+VVNTFHT+YHP QRAF PQ+FYTGKPKDL FQESQQGF V Q LQEA W *P P R**DHV*T+NGSHHE KD LH+ R HEEP * SQNH+ PSC*QHG*TCH*SLS Subject 473 *ANTYLTMVVNTFHTSYHPEQRAFGPQRFYTGKPKDLSFQESQQGFPEVSQLLQEAYWA*PLPGR**DHV*TNNGSHHEEKDSLHQRRSHEEPIS*VSQNHQFPSC*QHG*TCH*SLS 826
Range 5: 474 to 782 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
179.3 bits(385) | 0.0 | 79/103(77%) | 0/103(0%) | Plus/Plus |
Query 2 DKL**QV*PCCQQEGDR*F*LAQKVGSSCNLHRCKKSFPS**DPLLVYT*SHYLSGGGQTQHASCNGCNTP*NPCWLS*KPKSLGLPV*NF*GSNALCPGW*L 310 DKL**QV*PCCQQEG+ *F*L Q++GSSC+L CK+SF S**DPLLVYT*SH+L G G Q+ASCN C+T NPCWLS*K KSLGLPV*N *G NALC GW*L Subject 474 DKL**QV*PCCQQEGNW*F*LTQEIGSSCDLRWCKESFSS**DPLLVYT*SHHLPGSG*AQYASCNSCDTSGNPCWLS*KLKSLGLPV*NL*GPNALCSGW*L 782
Range 6: 473 to 673 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.9 bits(240) | 0.0 | 51/67(76%) | 0/67(0%) | Plus/Plus |
Query 1 **ALVTSLTMLSARRGSVILTRSKSWFLV*SPPVQEIFSFMMRSITGLYVISLPFWRWSDPTCFLQR 201 **ALVTSLTMLSARR VILT S++WFLV*SP VQ IF FMMRSI GLYVIS P W+W P CFLQ+ Subject 473 **ALVTSLTMLSARRELVILTHSRNWFLV*SPLVQGIFFFMMRSIIGLYVISSPSWKWLGPICFLQQ 673
Grapevine rupestris stem pitting associated virus isolate GRSPaV LSL, complete genome
Sequence ID: KR054735.1 Length: 8754 Number of Matches: 7
Range 1: 475 to 828 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
253.5 bits(547) | 0.0 | 103/118(87%) | 0/118(0%) | Plus/Plus |
Query 3 ISSSDKSNHVVSKKGIGDSDSLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVGSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLK 356 ISSSDKSNH++SKKGIGDSDSL++L PRVISTGARNLFLHDEIHYWS DLI+FL+V RPNMLLATAVIPPEILVGS ESLNPWAYQYRIS GQ+LFAPDGNW EMYSQPLS RYLLK Subject 475 ISSSDKSNHIISKKGIGDSDSLRRLTPRVISTGARNLFLHDEIHYWSTCDLISFLDVTRPNMLLATAVIPPEILVGSTESLNPWAYQYRISNGQLLFAPDGNWNEMYSQPLSCRYLLK 828
Range 2: 513 to 827 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
172.4 bits(370) | 0.0 | 77/105(73%) | 0/105(0%) | Minus/Minus |
Query 41 LSRYLLDSGCEYISHQLPSGAKSI*PSEILYW*AQGFRLSGEPTRISGGITAVARSMLGLTTSRKVMRSRIDQ*WISS*RKRFLAPVEITRGTNFLSESESPIPF 355 LS+YL D+GCEYIS Q PSGAKS P I YW*AQGF+LS EPTRISGGITAVARSM G TS+ +RS +DQ* ISS RKRFLAPV++TRG N LSESESP+PF Subject 513 LSKYLQDNGCEYISFQFPSGAKSNCPLLIRYW*AQGFKLSVEPTRISGGITAVARSMFGRVTSKNEIRSHVDQ**ISSWRKRFLAPVDMTRGVNLLSESESPMPF 827
Range 3: 475 to 825 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
120.2 bits(256) | 0.0 | 57/117(49%) | 0/117(0%) | Minus/Minus |
Query 3 KQIPT*QWL*IHFTPITIRGKEHLTLRNSILVSPRI*AFRRANKDFRGYYSRCKKHVGSDHLQKGNEITYRPVMDLIMKEKISCTGGDYTRNQLFERVRITDPLLADNMVRLVTRAY 353 +QIP WL*+HF P++IR KE L + N+ILVSPRI*AF A+K+FRG +S ++HV S ++QK + +T P+M+ IM+E+ISC G T + + VRI++ L + +V VTRAY Subject 475 EQIPAG*WL*VHFIPVSIRSKEQLPITNTILVSPRI*AFS*AHKNFRGNHSSSEEHVWSGNIQK*D*VTC*PIMNFIMEEEISCASGYDTGS*PPQ*VRISNALFTNYVV*FVTRAY 825
Range 4: 476 to 826 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
94.5 bits(200) | 0.0 | 52/117(44%) | 0/117(0%) | Minus/Minus |
Query 4 *ADTYLTVVVNTFHTNYHPGQRAFDPQKFYTGKPKDLGFQESQQGFQGVLQPLQEACWV*PPPER**DHV*TSNGSHHEGKDFLHRWRLHEEPTF*ASQNHRSPSC*QHG*TCH*SL 354 *A+T + V+TFH+++H QRA + GKPKDL FQ S Q FQG Q + AC V P+ H+ T+N HH G+DFL +W H E T S N + P * G CH*SL Subject 476 *ANTCRIMAVSTFHSSFHQEQRATAHY*YDIGKPKDLSFQLSPQEFQGESQQ*RGACLVG*HPKMRLGHMLTNNEFHHGGRDFLRQWI*HGELTSSVSPNLQCPFY*LCGLICH*SL 826
Range 5: 477 to 776 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
75.3 bits(158) | 0.0 | 46/100(46%) | 0/100(0%) | Plus/Plus |
Query 5 KL**QV*PCCQQEGDR*F*LAQKVGSSCNLHRCKKSFPS**DPLLVYT*SHYLSGGGQTQHASCNGCNTP*NPCWLS*KPKSLGLPV*NF*GSNALCPGW 304 KL**Q+ P +G F L ++V S C++H KKS P **+ LLV * + + G T+HA C++P*N C L+*K KSLGLP+ * + ALC W Subject 477 KL**QIKPHN**KGHWRFGLTEEVNSPCHIHWRKKSLPP**NSLLVNM*PNLIFGCYPTKHAPRYCCDSP*NSCGLN*KLKSLGLPISY**WAVALCS*W 776
Range 6: 476 to 661 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
36.8 bits(74) | 0.0 | 25/62(40%) | 0/62(0%) | Plus/Plus |
Query 4 *ALVTSLTMLSARRGSVILTRSKSWFLV*SPPVQEIFSFMMRSITGLYVISLPFWRWSDPTC 189 *ALVT+ T +R I T V P QEI S MM+ I G +V FW D TC Subject 476 *ALVTNQTT*LVKRALEIRTH*GG*LPVSYPLAQEISSSMMKFIIGQHVT*SHFWMLPDQTC 661
Rupestris stem pitting associated virus strain BS, complete genome
Sequence ID: AY881627.1 Length: 8743 Number of Matches: 8
Range 1: 475 to 828 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
247.6 bits(534) | 0.0 | 99/118(84%) | 0/118(0%) | Plus/Plus |
Query 3 ISSSDKSNHVVSKKGIGDSDSLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVGSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLK 356 ISSSDKS+ V+SKKGIGDSD+L++LVPRVISTGARNLFLHDEIHYWSI DLI FL+V +P+MLLATAVIPPE+LVGSPESLNPWAYQYR+S Q+LFAPDGNW EMYSQPLS RYLLK Subject 475 ISSSDKSSQVISKKGIGDSDTLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYRVSNNQLLFAPDGNWNEMYSQPLSCRYLLK 828
Range 2: 513 to 740 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.1 bits(282) | 0.0 | 60/76(79%) | 0/76(0%) | Minus/Minus |
Query 41 LYW*AQGFRLSGEPTRISGGITAVARSMLGLTTSRKVMRSRIDQ*WISS*RKRFLAPVEITRGTNFLSESESPIPF 268 LYW*AQG RLSGEPT SGGITAVA+S+LG TS+K+MRS IDQ* ISS RKRF APVEITRGTN S SESPIPF Subject 513 LYW*AQGLRLSGEPTSTSGGITAVAKSILGFATSKKLMRSLIDQ**ISSCRKRFRAPVEITRGTNLRSVSESPIPF 740
Range 3: 759 to 827 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
49.2 bits(101) | 0.0 | 20/23(87%) | 0/23(0%) | Minus/Minus |
Query 287 LSRYLLDSGCEYISHQLPSGAKS 355 LSRYL D GCEYIS QLPSGAKS Subject 759 LSRYLQDKGCEYISFQLPSGAKS 827
Range 4: 475 to 828 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
110.6 bits(235) | 0.0 | 55/118(47%) | 0/118(0%) | Minus/Minus |
Query 3 LKQIPT*QWL*IHFTPITIRGKEHLTLRNSILVSPRI*AFRRANKDFRGYYSRCKKHVGSDHLQKGNEITYRPVMDLIMKEKISCTGGDYTRNQLFERVRITDPLLADNMVRLVTRAY 356 LK + T L*+H PI I K+ L + +S+LV PRI AFRRAN+ + C++H ++QK NEI PVM+LIM+EKI T G+Y RNQ E VRI + LLA+++ +TR Y Subject 475 LK*VSTG*RL*VHLIPIAIWSKKQLVVTDSVLVGPRIEAFRRANQHLWRNHCSCQEHTWLCNIQKINEIAD*PVMNLIMQEKIPSTCGNYARNQPPECVRIANTLLANDLTGFITRTY 828
Range 5: 473 to 640 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
57.0 bits(118) | 0.0 | 29/56(52%) | 0/56(0%) | Minus/Minus |
Query 1 PER**DHV*TSNGSHHEGKDFLHRWRLHEEPTF*ASQNHRSPSC*QHG*TCH*SLS 168 P+ **D TSN SHH GKD H W+L EPT QN + PSC* H*+LS Subject 473 PKN**DR*LTSNESHHAGKDSEHLWKLRAEPTSGVCQNRQYPSC**LDWIYH*NLS 640
Range 6: 698 to 829 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
44.1 bits(90) | 0.0 | 21/44(48%) | 0/44(0%) | Minus/Minus |
Query 226 P*ADTYLTVVVNTFHTNYHPGQRAFDPQKFYTGKPKDLGFQESQ 357 P* Y V+T H+N H Q+A TG+PKD GFQESQ Subject 698 P*VGIYRIKAVSTSHSNCHLEQKAIGCY*LCTGRPKD*GFQESQ 829
Range 7: 510 to 776 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
74.8 bits(157) | 0.0 | 42/89(47%) | 0/89(0%) | Plus/Plus |
Query 38 QEGDR*F*LAQKVGSSCNLHRCKKSFPS**DPLLVYT*SHYLSGGGQTQHASCNGCNTP*NPCWLS*KPKSLGLPV*NF*GSNALCPGW 304 QEG F* +VGS+ N HRC +SFP+**D LLV SH G + ++A N ++ WLS*KP+SLGLPV + * A C W Subject 510 QEGYWRF*HTPEVGSARNFHRCSESFPA**DSLLVNQRSH*FFGCCKAKYALGNCSDSSRGAGWLS*KPQSLGLPVQSQ*QPIAFCSRW 776
Range 8: 473 to 670 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
55.1 bits(114) | 0.0 | 32/66(48%) | 0/66(0%) | Plus/Plus |
Query 1 **ALVTSLTMLSARRGSVILTRSKSWFLV*SPPVQEIFSFMMRSITGLYVISLPFWRWSDPTCFLQ 198 ** LV + ARR ILT S WF * P V IFS MMR ITG ISL FW C Q Subject 473 **VLVINPVKSLARRVLAILTHSGGWFRA*FPQVLGIFSCMMRFITGQSAISLIFWMLQSQVCSWQ 670
Grapevine rupestris stem pitting associated virus isolate SK30, complete genome
Sequence ID: KX274277.1 Length: 8724 Number of Matches: 7
Range 1: 475 to 828 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
244.8 bits(528) | 0.0 | 98/118(83%) | 0/118(0%) | Plus/Plus |
Query 3 ISSSDKSNHVVSKKGIGDSDSLKKLVPRVISTGARNLFLHDEIHYWSIRDLITFLEVVRPNMLLATAVIPPEILVGSPESLNPWAYQYRISEGQMLFAPDGNWCEMYSQPLSSRYLLK 356 ISSS KS+ V+SKKGIGDSD+L++LVPRVISTGARNLFLHDEIHYWSI DLI FL+V +P+MLLATAVIPPE+LVGSPESLNPWAYQYR+S Q+LFAPDGNW EMYSQPLS RYLLK Subject 475 ISSSSKSSQVISKKGIGDSDTLRRLVPRVISTGARNLFLHDEIHYWSISDLINFLDVAKPSMLLATAVIPPEVLVGSPESLNPWAYQYRVSNNQLLFAPDGNWNEMYSQPLSCRYLLK 828
Range 2: 513 to 740 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
139.4 bits(298) | 0.0 | 63/76(83%) | 0/76(0%) | Minus/Minus |
Query 41 LYW*AQGFRLSGEPTRISGGITAVARSMLGLTTSRKVMRSRIDQ*WISS*RKRFLAPVEITRGTNFLSESESPIPF 268 LYW*AQG RLSGEPT SGGITAVA+S+LGL TS+K+MRS IDQ* ISS RKRFLAPVEITRGTN LS SESPIPF Subject 513 LYW*AQGLRLSGEPTSTSGGITAVAKSILGLATSKKLMRSLIDQ**ISSCRKRFLAPVEITRGTNLLSVSESPIPF 740
Range 3: 759 to 827 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
49.2 bits(101) | 0.0 | 20/23(87%) | 0/23(0%) | Minus/Minus |
Query 287 LSRYLLDSGCEYISHQLPSGAKS 355 LSRYL D GCEYIS QLPSGAKS Subject 759 LSRYLQDKGCEYISFQLPSGAKS 827
Range 4: 475 to 828 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
120.7 bits(257) | 0.0 | 58/118(49%) | 0/118(0%) | Minus/Minus |
Query 3 LKQIPT*QWL*IHFTPITIRGKEHLTLRNSILVSPRI*AFRRANKDFRGYYSRCKKHVGSDHLQKGNEITYRPVMDLIMKEKISCTGGDYTRNQLFERVRITDPLLADNMVRLVTRAY 356 LK + T Q L*+H PI I K+ L + +S+LV PRI AFRRAN+ Y C++H ++QK NEI PVM+LIM+EKI T G+Y RNQ E VRIT+ LLA+++ TR Y Subject 475 LK*VSTGQRL*VHLIPIAIWSKKQLVITDSVLVGPRIEAFRRANQHLWRNYCSCQEHTWLGNIQKINEIAD*PVMNLIMQEKIPSTSGNYARNQPPECVRITNTLLANDLTGFTTRTY 828
Range 5: 506 to 829 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
100.0 bits(212) | 0.0 | 52/108(48%) | 0/108(0%) | Minus/Minus |
Query 34 P*ADTYLTVVVNTFHTNYHPGQRAFDPQKFYTGKPKDLGFQESQQGFQGVLQPLQEACWV*PPPER**DHV*TSNGSHHEGKDFLHRWRLHEEPTF*ASQNHRSPSC* 357 P* Y T V+T H+N H Q+A TG+PKD GFQESQ L L A P+ **D TSN SHH GKD H+W+L EPT * QNH+ PSC* Subject 506 P*VGIYRTKAVSTSHSNCHLEQKAIGYY*LCTGRPKD*GFQESQPAPLEELLQLPRAYLAWQHPKN**DR*LTSNESHHAGKDS*HQWKLRAEPTS*VCQNHQYPSC* 829
Range 6: 510 to 776 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
77.6 bits(163) | 0.0 | 45/89(51%) | 0/89(0%) | Plus/Plus |
Query 38 QEGDR*F*LAQKVGSSCNLHRCKKSFPS**DPLLVYT*SHYLSGGGQTQHASCNGCNTP*NPCWLS*KPKSLGLPV*NF*GSNALCPGW 304 QEG *F* Q+VGS+ N H C +SFP+**D LLV SH G Q ++A N N+ WLS*KP+SLGLPV + * A C W Subject 510 QEGYW*F*HTQEVGSARNFHWC*ESFPA**DSLLVNQRSH*FFGCCQAKYALGNCSNSSRGAGWLS*KPQSLGLPVQSQ**PIAFCSRW 776
Range 7: 473 to 670 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
56.1 bits(116) | 0.0 | 33/66(50%) | 0/66(0%) | Plus/Plus |
Query 1 **ALVTSLTMLSARRGSVILTRSKSWFLV*SPPVQEIFSFMMRSITGLYVISLPFWRWSDPTCFLQ 198 ** LV + ARR VILT S WF * P V IFS MMR ITG ISL FW C Q Subject 473 **VLVVNPVKSLARRVLVILTHSGGWFRA*FPLVLGIFSCMMRFITGQSAISLIFWMLPSQVCSWQ 670
Nucleotide Sequence (347 letters)
Query ID: | ds2016-133_14 |
Query definition: | No definition line |
Query length: | 603 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
234.8 | 1233.0 | 41% | 3.368e-60 | 83% | KX274274.1 | |
232.5 | 1254.1 | 41% | 1.648e-59 | 85% | JN683374.1 | |
231.5 | 1169.8 | 41% | 3.111e-59 | 77% | KX958435.1 | |
231.1 | 1054.3 | 41% | 4.274e-59 | 69% | AB277788.1 | |
230.2 | 910.5 | 39% | 8.066e-59 | 59% | AY368172.2 |
Alignments
Grapevine rupestris stem pitting associated virus isolate SK704 A, complete genome
Sequence ID: KX274274.1 Length: 8725 Number of Matches: 6
Range 1: 5755 to 6081 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
234.8 bits(506) | 0.0 | 99/109(91%) | 0/109(0%) | Minus/Plus |
Query 1 VLGVFGPELGYIEKKLMQALKPNFYIHSGIGFDELNEWVRVRGFTDVCTESGYEAFDASQDHFILAFELQIMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS 327 VL F P + YIEKKLMQALKPNFYIHSG G DELNEWVR RGFTDVCTES YEAFDASQDHFILAFELQIMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS Subject 5755 VLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVRTRGFTDVCTESDYEAFDASQDHFILAFELQIMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS 6081
Range 2: 5784 to 6080 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
219.6 bits(473) | 0.0 | 95/99(96%) | 0/99(0%) | Plus/Minus |
Query 2 LASPVNLIIAKEPSFEPR*ILMNS*SKIRSSGSPKNLMICSSNAKMKWSWDASKAS*PDSVHTSVKPLTLTHSFSSSKPMPE*M*KLGFNACMSFFSMY 298 LASPVNLIIAKEPSFEPR*ILMNS*SKIRSSGSPKNLMICSSNAKMKWSWDASKAS* DSVHTSVKPL LTHSFSSS+P+PE*M*KLGFNACMSFFSMY Subject 5784 LASPVNLIIAKEPSFEPR*ILMNS*SKIRSSGSPKNLMICSSNAKMKWSWDASKAS*SDSVHTSVKPLVLTHSFSSSRPLPE*M*KLGFNACMSFFSMY 6080
Range 3: 5755 to 6081 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
212.3 bits(457) | 0.0 | 93/109(85%) | 0/109(0%) | Plus/Minus |
Query 1 ACLTCKSHYRKRTKL*TKMNLDELIV*N*IFRQS*KSHDLQFKCQDEMVLGCVKSFIA*LCAYICETSDPNPFI*LIKTYA*VNVEVRLQCLHELLFNVPQLRTKHTQH 327 ACLTCKSHY KRTKL*TKMNLDELIV*+*IFRQS*KSHDLQFKCQDEMVLGCVKSFI LC +ICETS PNPFI*LIKT+A*VNVEVRL CLHELLFNV +R K Q+ Subject 5755 ACLTCKSHYCKRTKL*TKMNLDELIV*D*IFRQS*KSHDLQFKCQDEMVLGCVKSFIVRLCTHICETSGPNPFI*LIKTFA*VNVEVRL*CLHELLFNVSHVRCKANQN 6081
Range 4: 5754 to 6080 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
205.0 bits(441) | 0.0 | 91/109(83%) | 0/109(0%) | Minus/Plus |
Query 2 CVGCVWS*VGVH*KEAHASIEA*LLHSLRHRF**AK*MG*GQRFHRCMHRVRL*SF*RIPRPFHLGI*TANHEIFRTA*RSNFRL*VHQDSSWFKAWFFCDNEIYR*GK 328 C G + + +H*KEAHASI+A*LLHSLR R **AK*MG* QRFHRC++RV L*SF*RIPRPFHLGI*TANHEIFRTA*RSN RL*VHQDSSWFKAWFFC+NEIYR*GK Subject 5754 CFGSLCTLHAIH*KEAHASIKA*LLHSLRQRS**AK*MG*DQRFHRCVYRVGL*SF*RIPRPFHLGI*TANHEIFRTA*RSNLRL*VHQDSSWFKAWFFCNNEIYR*GK 6080
Range 5: 5759 to 6079 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
192.6 bits(414) | 0.0 | 91/107(85%) | 0/107(0%) | Plus/Minus |
Query 3 LPHL*ISLSQKNQALNQDES**THSLKLDLQAVLKIS*FAVQMPR*NGLGMRQKLHSLTLCIHL*NL*P*PIHLAHQNLCLSECRS*ASMLA*ASFQCTPTQDQTHP 323 LPHL*ISL QKNQALNQDES**THSL+LDLQAVLKIS*FAVQMPR*NGLGMRQKLHS TL HL*NL *PIHLAHQ+LCLSECRS*A MLA*ASFQC + Q+ P Subject 5759 LPHL*ISLLQKNQALNQDES**THSLRLDLQAVLKIS*FAVQMPR*NGLGMRQKLHSPTLYTHL*NLWS*PIHLAHQDLCLSECRS*ALMLA*ASFQCIACKVQSEP 6079
Range 6: 5759 to 6028 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
168.8 bits(362) | 0.0 | 77/90(86%) | 0/90(0%) | Minus/Plus |
Query 54 WVCLVLSWGTLKRSSCKH*SLTSTFTQA*VLMS*MNGLGSEVSQMYAQSQAMKLLTHPKTISSWHLNCKS*DF*DCLKI*F*TMSSSRFI 323 W L L+ TLKRSSCKH*SLTSTFTQA VLMS*MNGLG EVSQM QS+ MKLLTHPKTISSWHLNCKS*DF*DCLKI* *TMSSSRFI Subject 5759 WFALHLTCDTLKRSSCKH*SLTSTFTQAKVLMS*MNGLGPEVSQMCVQSRTMKLLTHPKTISSWHLNCKS*DF*DCLKI*S*TMSSSRFI 6028
Grapevine rupestris stem pitting associated virus strain GR4 RNA dependent RNA polymerase gene, partial cds
Sequence ID: JN683374.1 Length: 476 Number of Matches: 6
Range 1: 52 to 378 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
232.5 bits(501) | 0.0 | 98/109(90%) | 0/109(0%) | Minus/Plus |
Query 1 VLGVFGPELGYIEKKLMQALKPNFYIHSGIGFDELNEWVRVRGFTDVCTESGYEAFDASQDHFILAFELQIMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS 327 VL F P + YIEKKLMQALKPNFYIHSG G DEL+EWVR RGFTDVCTES YEAFDASQDHFILAFELQIMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS Subject 52 VLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELDEWVRARGFTDVCTESDYEAFDASQDHFILAFELQIMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS 378
Range 2: 52 to 378 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
220.1 bits(474) | 0.0 | 95/109(87%) | 0/109(0%) | Plus/Minus |
Query 1 ACLTCKSHYRKRTKL*TKMNLDELIV*N*IFRQS*KSHDLQFKCQDEMVLGCVKSFIA*LCAYICETSDPNPFI*LIKTYA*VNVEVRLQCLHELLFNVPQLRTKHTQH 327 ACLTCKSHYRKRTKL*TKMNLDELIV*N*IFRQS*KSHDLQF+CQ+EMVLGCVKSFI *LCAYICETS PNPFI*LIKT+A*VNVEVRL CLHELLFN+ +R K Q+ Subject 52 ACLTCKSHYRKRTKL*TKMNLDELIV*N*IFRQS*KSHDLQFECQNEMVLGCVKSFIV*LCAYICETSGPNPFI*LIKTFA*VNVEVRL*CLHELLFNISHVRCKANQN 378
Range 3: 81 to 377 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
214.1 bits(461) | 0.0 | 93/99(94%) | 0/99(0%) | Plus/Minus |
Query 2 LASPVNLIIAKEPSFEPR*ILMNS*SKIRSSGSPKNLMICSSNAKMKWSWDASKAS*PDSVHTSVKPLTLTHSFSSSKPMPE*M*KLGFNACMSFFSMY 298 LASPVNLIIAKEPSFEPR*ILMNS*SKIRSSGSPKNLMICSSNAKMKWSWDASKAS* DSVHTSVKPL LTHS SSS+P+PE*M*KLGFNACMSFFS+Y Subject 81 LASPVNLIIAKEPSFEPR*ILMNS*SKIRSSGSPKNLMICSSNAKMKWSWDASKAS*SDSVHTSVKPLALTHSSSSSRPLPE*M*KLGFNACMSFFSIY 377
Range 4: 51 to 377 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
212.8 bits(458) | 0.0 | 93/109(85%) | 0/109(0%) | Minus/Plus |
Query 2 CVGCVWS*VGVH*KEAHASIEA*LLHSLRHRF**AK*MG*GQRFHRCMHRVRL*SF*RIPRPFHLGI*TANHEIFRTA*RSNFRL*VHQDSSWFKAWFFCDNEIYR*GK 328 C G + + ++*KEAHASI+A*LLHSLR R **A+*MG*GQRFHRCMHRVRL*SF*RIPRPFH GI TANHEIFRTA*RSNFRL*VHQDSSWFKAWFFCDNEIYR*GK Subject 51 CFGSLCTLHAIY*KEAHASIKA*LLHSLRQRS**AR*MG*GQRFHRCMHRVRL*SF*RIPRPFHFGIRTANHEIFRTA*RSNFRL*VHQDSSWFKAWFFCDNEIYR*GK 377
Range 5: 56 to 376 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
202.7 bits(436) | 0.0 | 94/107(88%) | 0/107(0%) | Plus/Minus |
Query 3 LPHL*ISLSQKNQALNQDES**THSLKLDLQAVLKIS*FAVQMPR*NGLGMRQKLHSLTLCIHL*NL*P*PIHLAHQNLCLSECRS*ASMLA*ASFQCTPTQDQTHP 323 LPHL*ISLSQKNQALNQDES**THSLKLDLQAVLKIS*FAV+MP+*NGLGMRQKLHSLTLCIHL*NL P*PIHLAHQ+LCLSECRS*A MLA*ASFQ + Q+ P Subject 56 LPHL*ISLSQKNQALNQDES**THSLKLDLQAVLKIS*FAVRMPK*NGLGMRQKLHSLTLCIHL*NLWP*PIHLAHQDLCLSECRS*ALMLA*ASFQYIACKVQSEP 376
Range 6: 56 to 325 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
172.0 bits(369) | 0.0 | 78/90(87%) | 0/90(0%) | Minus/Plus |
Query 54 WVCLVLSWGTLKRSSCKH*SLTSTFTQA*VLMS*MNGLGSEVSQMYAQSQAMKLLTHPKTISSWHLNCKS*DF*DCLKI*F*TMSSSRFI 323 W L L+ LKRSSCKH*SLTSTFTQA VLMS*MNGLG EVSQMYAQSQ MKLLTHPKTIS WH NCKS*DF*DCLKI*F*TMSSSRFI Subject 56 WFALHLTCDILKRSSCKH*SLTSTFTQAKVLMS*MNGLGPEVSQMYAQSQTMKLLTHPKTISFWHSNCKS*DF*DCLKI*F*TMSSSRFI 325
Grapevine rupestris stem pitting associated virus isolate CS BR, complete genome
Sequence ID: KX958435.1 Length: 8743 Number of Matches: 6
Range 1: 5756 to 6082 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
231.5 bits(499) | 0.0 | 98/109(90%) | 0/109(0%) | Minus/Plus |
Query 1 VLGVFGPELGYIEKKLMQALKPNFYIHSGIGFDELNEWVRVRGFTDVCTESGYEAFDASQDHFILAFELQIMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS 327 VL F P + YIEKKLMQALKPNFYIHSG G DELNEWVR RGFT VCTES YEAFDASQDHFILAFELQIMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS Subject 5756 VLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVRARGFTGVCTESDYEAFDASQDHFILAFELQIMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS 6082
Range 2: 5785 to 6081 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
212.3 bits(457) | 0.0 | 91/99(92%) | 0/99(0%) | Plus/Minus |
Query 2 LASPVNLIIAKEPSFEPR*ILMNS*SKIRSSGSPKNLMICSSNAKMKWSWDASKAS*PDSVHTSVKPLTLTHSFSSSKPMPE*M*KLGFNACMSFFSMY 298 LASPVNLIIAKEPSFEPR*ILMNS*S+IRSSGSPKNL+ICSSNAKMKWSWDASKAS* DSVHT VKPL LTHSFSSS+P+PE*+*KLGFNACMSFFSMY Subject 5785 LASPVNLIIAKEPSFEPR*ILMNS*SRIRSSGSPKNLIICSSNAKMKWSWDASKAS*SDSVHTPVKPLALTHSFSSSRPLPE*I*KLGFNACMSFFSMY 6081
Range 3: 5756 to 6082 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
203.6 bits(438) | 0.0 | 87/109(80%) | 0/109(0%) | Plus/Minus |
Query 1 ACLTCKSHYRKRTKL*TKMNLDELIV*N*IFRQS*KSHDLQFKCQDEMVLGCVKSFIA*LCAYICETSDPNPFI*LIKTYA*VNVEVRLQCLHELLFNVPQLRTKHTQH 327 ACLTCKSHYR+R KL*TKMN DE IV N*IF QS*KSH+LQFKCQDEMVLGC+KSFI *LCAY CETS PNPFI*LIKT+A*VN+EV QCLHELLFNV +R K Q+ Subject 5756 ACLTCKSHYRERAKL*TKMNFDEFIVQN*IFWQS*KSHNLQFKCQDEMVLGCIKSFIV*LCAYTCETSCPNPFI*LIKTFA*VNIEVGFQCLHELLFNVSHVRCKANQN 6082
Range 4: 5755 to 6081 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
184.4 bits(396) | 0.0 | 84/109(77%) | 0/109(0%) | Minus/Plus |
Query 2 CVGCVWS*VGVH*KEAHASIEA*LLHSLRHRF**AK*MG*GQRFHRCMHRVRL*SF*RIPRPFHLGI*TANHEIFRTA*RSNFRL*VHQDSSWFKAWFFCDNEIYR*GK 328 C G + + +H*KEAHASIE LL+SLR R **AK*MG*G+RFHRCMHRVRL*SF* IP PFHLGI*TAN+EIFRTA RSN L*+HQ+SSWFKAW F DNEIYR*GK Subject 5755 CFGSLCTLHAIH*KEAHASIETQLLYSLRQRS**AK*MG*GKRFHRCMHRVRL*SF*CIPGPFHLGI*TANYEIFRTARRSNSGL*IHQNSSWFKAWLFRDNEIYR*GK 6081
Range 5: 5760 to 6080 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
181.1 bits(389) | 0.0 | 86/107(80%) | 0/107(0%) | Plus/Minus |
Query 3 LPHL*ISLSQKNQALNQDES**THSLKLDLQAVLKIS*FAVQMPR*NGLGMRQKLHSLTLCIHL*NL*P*PIHLAHQNLCLSECRS*ASMLA*ASFQCTPTQDQTHP 323 LPHL*ISLS+K+QALNQDE ** HS +LDL AVLKIS*FAVQMPR*NG GM QKLHSLTLCIHL*NL P*PIHLAHQ+LCLSE RS SMLA*ASFQC + Q+ P Subject 5760 LPHL*ISLSRKSQALNQDEF**IHSPELDLLAVLKIS*FAVQMPR*NGPGMHQKLHSLTLCIHL*NLLP*PIHLAHQDLCLSEYRSWVSMLA*ASFQCIACKVQSEP 6080
Range 6: 5760 to 6029 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
156.9 bits(336) | 0.0 | 70/90(78%) | 0/90(0%) | Minus/Plus |
Query 54 WVCLVLSWGTLKRSSCKH*SLTSTFTQA*VLMS*MNGLGSEVSQMYAQSQAMKLLTHPKTISSWHLNCKS*DF*DCLKI*F*TMSSSRFI 323 W L L+ TLKRSSCKH*+ TS FTQA VLMS*MNGLG EVSQ+YAQSQ MKLL HP+TISSWHLNCK *DF*DC KI*F TM+SS+FI Subject 5760 WFALHLTCDTLKRSSCKH*NPTSIFTQAKVLMS*MNGLGQEVSQVYAQSQTMKLLMHPRTISSWHLNCKL*DF*DCQKI*FWTMNSSKFI 6029
Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: Ham1
Sequence ID: AB277788.1 Length: 2876 Number of Matches: 6
Range 1: 11 to 337 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
231.1 bits(498) | 0.0 | 97/109(89%) | 0/109(0%) | Minus/Plus |
Query 1 VLGVFGPELGYIEKKLMQALKPNFYIHSGIGFDELNEWVRVRGFTDVCTESGYEAFDASQDHFILAFELQIMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS 327 VL F P + YIEKKLMQALKPNFYIHSG G DELNEWVR RGFT VCTES YEAFDASQDHFILAFELQ+MRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS Subject 11 VLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVRARGFTGVCTESDYEAFDASQDHFILAFELQVMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS 337
Range 2: 40 to 336 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
201.8 bits(434) | 0.0 | 88/99(89%) | 0/99(0%) | Plus/Minus |
Query 2 LASPVNLIIAKEPSFEPR*ILMNS*SKIRSSGSPKNLMICSSNAKMKWSWDASKAS*PDSVHTSVKPLTLTHSFSSSKPMPE*M*KLGFNACMSFFSMY 298 LASPVNLIIAKEPSF+PR*ILMNS*SKIRSSGSPKNLM CSSNA+MK SWDASKAS* DSVHT VKPL LTHSFSSS+P+PE*M*K GFNAC+SFFSMY Subject 40 LASPVNLIIAKEPSFDPR*ILMNS*SKIRSSGSPKNLMTCSSNARMK*SWDASKAS*SDSVHTPVKPLALTHSFSSSRPLPE*M*KFGFNACISFFSMY 336
Range 3: 11 to 334 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
176.6 bits(379) | 0.0 | 75/108(69%) | 0/108(0%) | Plus/Minus |
Query 4 CLTCKSHYRKRTKL*TKMNLDELIV*N*IFRQS*KSHDLQFKCQDEMVLGCVKSFIA*LCAYICETSDPNPFI*LIKTYA*VNVEVRLQCLHELLFNVPQLRTKHTQH 327 CLTC+SH KR KL* KMN DELI+*+ IF QS*KSHDLQFKCQDEM+LGC+KSFI *LC + CETS NPFI*LIKT+A +NVE+ QCLH+LLFNV + K Q+ Subject 11 CLTCESHNCKRAKL*PKMNFDELII*DQIFWQS*KSHDLQFKCQDEMILGCIKSFIV*LCTHTCETSSSNPFI*LIKTFARMNVEIWFQCLHKLLFNVSHVGCKANQN 334
Range 4: 15 to 335 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
156.9 bits(336) | 0.0 | 77/107(72%) | 0/107(0%) | Plus/Minus |
Query 3 LPHL*ISLSQKNQALNQDES**THSLKLDLQAVLKIS*FAVQMPR*NGLGMRQKLHSLTLCIHL*NL*P*PIHLAHQNLCLSECRS*ASMLA*ASFQCTPTQDQTHP 323 LPHL*IS QK+QAL QDE **TH+L+ DL AVLKIS* AVQMP *N LGM QKLHSLTL HL*NL* *PIHLAHQ+LC +ECR+ SM A*ASFQC + Q+ P Subject 15 LPHL*IS*LQKSQALTQDEF**THNLRSDLLAVLKIS*LAVQMPG*NDLGMHQKLHSLTLYTHL*NL*L*PIHLAHQDLCQNECRNLVSMPA*ASFQCIACRVQSEP 335
Range 5: 40 to 336 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
155.9 bits(334) | 0.0 | 72/99(73%) | 0/99(0%) | Minus/Plus |
Query 2 VH*KEAHASIEA*LLHSLRHRF**AK*MG*GQRFHRCMHRVRL*SF*RIPRPFHLGI*TANHEIFRTA*RSNFRL*VHQDSSWFKAWFFCDNEIYR*GK 298 +H*KEA+A IE LHS R **AK*MG* RFHRC++RVRL*SF* IPR FH GI*TA+HEIFRTA RS+ RL*VHQ+SSW KAW FC+ EI+R*GK Subject 40 IH*KEAYAGIETKFLHSFWQRS**AK*MG*S*RFHRCVYRVRL*SF*CIPRSFHPGI*TASHEIFRTARRSDLRL*VHQNSSWVKAWLFCNYEIHR*GK 336
Range 6: 15 to 284 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.1 bits(282) | 0.0 | 63/90(70%) | 0/90(0%) | Minus/Plus |
Query 54 WVCLVLSWGTLKRSSCKH*SLTSTFTQA*VLMS*MNGLGSEVSQMYAQSQAMKLLTHPKTISSWHLNCKS*DF*DCLKI*F*TMSSSRFI 323 W L + TLKRS C+H*+ STF A VLMS*MNGL EVSQ+ QSQ MKLL HPK ISSWHLNCKS*DF*DC KI* * MSSS+FI Subject 15 WFALHPTCDTLKRSLCRH*NQISTFILAKVLMS*MNGLELEVSQVCVQSQTMKLLMHPKIISSWHLNCKS*DF*DCQKI*S*IMSSSKFI 284
Rupestris stem pitting associated virus isolate RSPaV PN, complete genome
Sequence ID: AY368172.2 Length: 8743 Number of Matches: 6
Range 1: 5755 to 6081 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
230.2 bits(496) | 0.0 | 97/109(89%) | 0/109(0%) | Minus/Plus |
Query 1 VLGVFGPELGYIEKKLMQALKPNFYIHSGIGFDELNEWVRVRGFTDVCTESGYEAFDASQDHFILAFELQIMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS 327 VL F P + YIEKKLMQALKPNFYIHSG G DELNEWV+ RGFT VCTES YEAFDASQDHFILAFELQIMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS Subject 5755 VLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVKARGFTGVCTESDYEAFDASQDHFILAFELQIMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRFTGEAS 6081
Range 2: 5784 to 6080 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
186.6 bits(401) | 0.0 | 83/99(84%) | 0/99(0%) | Plus/Minus |
Query 2 LASPVNLIIAKEPSFEPR*ILMNS*SKIRSSGSPKNLMICSSNAKMKWSWDASKAS*PDSVHTSVKPLTLTHSFSSSKPMPE*M*KLGFNACMSFFSMY 298 LASPVNLIIAKEPSF+PR*ILMNS*S+IRSSG PKNL+ICSSNA+MK S DASKAS* DSV T VKPL THSFSSS+P+PE*M*KLGFNAC+SFFS+Y Subject 5784 LASPVNLIIAKEPSFDPR*ILMNS*SRIRSSGKPKNLIICSSNARMK*S*DASKAS*SDSVQTPVKPLAFTHSFSSSRPLPE*M*KLGFNACISFFSIY 6080
Range 3: 5776 to 6081 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
140.8 bits(301) | 0.0 | 60/102(59%) | 0/102(0%) | Plus/Minus |
Query 1 ACLTCKSHYRKRTKL*TKMNLDELIV*N*IFRQS*KSHDLQFKCQDEMVLGCVKSFIA*LCAYICETSDPNPFI*LIKTYA*VNVEVRLQCLHELLFNVPQL 306 AC TC+SHY KR +L* KMN DE I+*+*IF Q+ K H+LQFK Q+EM+L +K FI *LCA C+TS +P I I+ +A*+NV+VRLQCLH+ LFN+P + Subject 5776 ACFTCESHYCKRAEL*PKMNFDEFII*D*IFWQTQKPHNLQFKRQNEMILRRIKGFIV*LCANTCKTSSFHPLIQFIEAFA*MNVKVRLQCLHKFLFNIPHV 6081
Range 4: 5759 to 6079 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
129.8 bits(277) | 0.0 | 67/107(63%) | 0/107(0%) | Plus/Minus |
Query 3 LPHL*ISLSQKNQALNQDES**THSLKLDLQAVLKIS*FAVQMPR*NGLGMRQKLHSLTLCIHL*NL*P*PIHLAHQNLCLSECRS*ASMLA*ASFQCTPTQDQTHP 323 L HL*ISL QK++AL QDE ** H+L LDL A K S*FAVQ P *N Q+LHSLTLC HL*NL* P H H+ LCL+EC+S*ASMLA* SFQ T + ++ P Subject 5759 LLHL*ISLLQKSRALTQDEF**IHNLGLDLLANPKTS*FAVQTPE*NDPETHQRLHSLTLCKHL*NL*LSPTHSVHRGLCLNECKS*ASMLA*VSFQYTSCRARSGP 6079
Range 5: 5784 to 6080 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
129.8 bits(277) | 0.0 | 62/99(63%) | 0/99(0%) | Minus/Plus |
Query 2 VH*KEAHASIEA*LLHSLRHRF**AK*MG*GQRFHRCMHRVRL*SF*RIPRPFHLGI*TANHEIFRTA*RSNFRL*VHQDSSWFKAWFFCDNEIYR*GK 298 V+*KE +ASIEA*LLHS R R * +*+G RF+RC+HRVRL*S * + FH G+*TAN+E+F A RSN RL*+HQ+SSW KA FC+NEI+R* K Subject 5784 VY*KETYASIEA*LLHSFRQRPR*TE*VGES*RFYRCLHRVRL*SL*CVSGSFHSGV*TANYEVFGFARRSNPRL*IHQNSSWVKARLFCNNEIHR*SK 6080
Range 6: 5783 to 6028 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
93.2 bits(197) | 0.0 | 48/82(59%) | 0/82(0%) | Minus/Plus |
Query 54 GTLKRSSCKH*SLTSTFTQA*VLMS*MNGLGSEVSQMYAQSQAMKLLTHPKTISSWHLNCKS*DF*DCLKI*F*TMSSSRFI 299 G LKR+ CKH*SLT TF QA M+*M+G EV Q++AQSQ MK L + IS W LNCK * F C KI* * M+SS+FI Subject 5783 GILKRNLCKH*SLTFTFIQAKASMN*MSG*KLEVLQVFAQSQTMKPLMRLRIISFWRLNCKL*GFWVCQKI*S*IMNSSKFI 6028
Nucleotide Sequence (325 letters)
Query ID: | ds2016-133_14 |
Query definition: | No definition line |
Query length: | 603 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
234.8 | 1247.7 | 43% | 2.981e-60 | 97% | AY881627.1 | |
234.8 | 1231.2 | 43% | 2.981e-60 | 96% | KX274277.1 | |
225.6 | 973.7 | 42% | 1.71e-57 | 74% | KR528585.1 | |
225.1 | 992.0 | 42% | 2.35e-57 | 76% | AF026278.1 | |
225.1 | 994.8 | 42% | 2.35e-57 | 76% | HE591388.1 |
Alignments
Rupestris stem pitting associated virus strain BS, complete genome
Sequence ID: AY881627.1 Length: 8743 Number of Matches: 6
Range 1: 2227 to 2514 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
234.8 bits(506) | 0.0 | 94/96(98%) | 0/96(0%) | Minus/Plus |
Query 3 DFNWVVRNIGFEDRLKGRGASFFSKPGISRYSYNGGSHTSLGWPKFMDQILSSTGGRNYYNSCLAQIYEENSKLALHKDDESCYETGLKVLTVNLI 290 DFNWVVRNIGFEDRLKGRGASFFSKPGISRYSYNGGSHTSLGWPKFMDQILSSTGGRNYYNSCL QIYEENSKLALHKDDESCYETG KVLTVNLI Subject 2227 DFNWVVRNIGFEDRLKGRGASFFSKPGISRYSYNGGSHTSLGWPKFMDQILSSTGGRNYYNSCLVQIYEENSKLALHKDDESCYETGHKVLTVNLI 2514
Range 2: 2226 to 2516 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
232.0 bits(500) | 0.0 | 97/97(100%) | 0/97(0%) | Minus/Plus |
Query 1 GFQLGGEEYWL*R*VERQGCIILLKTRDFTL*LQWWKPYKSRVA*VHGSDSKLHRWA*LLQFMPGSNL*RKFKIGPS*G**ELL*NWAQGFNCQFNW 291 GFQLGGEEYWL*R*VERQGCIILLKTRDFTL*LQWWKPYKSRVA*VHGSDSKLHRWA*LLQFMPGSNL*RKFKIGPS*G**ELL*NWAQGFNCQFNW Subject 2226 GFQLGGEEYWL*R*VERQGCIILLKTRDFTL*LQWWKPYKSRVA*VHGSDSKLHRWA*LLQFMPGSNL*RKFKIGPS*G**ELL*NWAQGFNCQFNW 2516
Range 3: 2228 to 2515 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
216.9 bits(467) | 0.0 | 94/96(98%) | 0/96(0%) | Minus/Plus |
Query 2 ISTGW*GILALKIG*KAGVHHSSQNQGFHVIATMVEAIQV*GGLSSWIRF*APPVGVTTTIHAWLKSMKKIQNWPFIRMMRVAMKLGSRF*LSI*L 289 ISTGW*GILALKIG*KAGVHHSSQNQGFHVIATMVEAIQV*GGLSSWIRF*APPVGVTTTIHAW KSMKKIQNWPFIRMMRVAMKLG+RF*LSI*L Subject 2228 ISTGW*GILALKIG*KAGVHHSSQNQGFHVIATMVEAIQV*GGLSSWIRF*APPVGVTTTIHAWFKSMKKIQNWPFIRMMRVAMKLGTRF*LSI*L 2515
Range 4: 2227 to 2514 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
212.3 bits(457) | 0.0 | 94/96(98%) | 0/96(0%) | Plus/Minus |
Query 3 N*IDS*NLEPSFIATLIILMKGQF*IFFIDLSQA*IVVVTPTGGA*NLIHELRPP*TCMASTIVAIT*NPWF*EE*CTPAFQPIFKANIPHHPVEI 290 N*IDS*NL PSFIATLIILMKGQF*IFFIDL+QA*IVVVTPTGGA*NLIHELRPP*TCMASTIVAIT*NPWF*EE*CTPAFQPIFKANIPHHPVEI Subject 2227 N*IDS*NLVPSFIATLIILMKGQF*IFFIDLNQA*IVVVTPTGGA*NLIHELRPP*TCMASTIVAIT*NPWF*EE*CTPAFQPIFKANIPHHPVEI 2514
Range 5: 2276 to 2515 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
200.8 bits(432) | 0.0 | 79/80(99%) | 0/80(0%) | Plus/Minus |
Query 2 QLN*QLKP*AQFHSNSHHPYEGPILNFLHRFEPGMNCSSYAHRWSLESDP*T*ATLDLYGFHHCSYNVKSLVLRRMMHPC 241 QLN*QLKP AQFHSNSHHPYEGPILNFLHRFEPGMNCSSYAHRWSLESDP*T*ATLDLYGFHHCSYNVKSLVLRRMMHPC Subject 2276 QLN*QLKPCAQFHSNSHHPYEGPILNFLHRFEPGMNCSSYAHRWSLESDP*T*ATLDLYGFHHCSYNVKSLVLRRMMHPC 2515
Range 6: 2223 to 2453 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
150.9 bits(323) | 0.0 | 75/77(97%) | 0/77(0%) | Plus/Minus |
Query 64 RANFEFSS*I*ARHEL**LRPPVELRI*SMNLGHPRLVWXXXXXXXREIPGFEKNDAPLPFNLSSKPIFLTTQLKST 294 RANFEFSS*I* RHEL**LRPPVELRI*SMNLGHPRLVWLPPL*L*REIPGFEKNDAPLPFNLSSKPIFLTTQLKS+ Subject 2223 RANFEFSS*I*TRHEL**LRPPVELRI*SMNLGHPRLVWLPPL*L*REIPGFEKNDAPLPFNLSSKPIFLTTQLKSS 2453
Grapevine rupestris stem pitting associated virus isolate SK30, complete genome
Sequence ID: KX274277.1 Length: 8724 Number of Matches: 6
Range 1: 2227 to 2514 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
234.8 bits(506) | 0.0 | 94/96(98%) | 0/96(0%) | Minus/Plus |
Query 3 DFNWVVRNIGFEDRLKGRGASFFSKPGISRYSYNGGSHTSLGWPKFMDQILSSTGGRNYYNSCLAQIYEENSKLALHKDDESCYETGLKVLTVNLI 290 DFNWVVRNIGFEDRLKGRGASFFSKPGISRYSYNGGSHTSLGWPKFMDQILSSTGGRNYYNSCL QIYEENSKLALHKDDESCYETG KVLTVNLI Subject 2227 DFNWVVRNIGFEDRLKGRGASFFSKPGISRYSYNGGSHTSLGWPKFMDQILSSTGGRNYYNSCLVQIYEENSKLALHKDDESCYETGHKVLTVNLI 2514
Range 2: 2226 to 2516 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.4 bits(490) | 0.0 | 95/97(98%) | 0/97(0%) | Minus/Plus |
Query 1 GFQLGGEEYWL*R*VERQGCIILLKTRDFTL*LQWWKPYKSRVA*VHGSDSKLHRWA*LLQFMPGSNL*RKFKIGPS*G**ELL*NWAQGFNCQFNW 291 GFQLGGEEYWL*R*VERQGCIILLKTRDFTL*LQWWKPYKSRVA*VHGSDSKLHRWA*LLQFMPGSNL*RKFKIGPS*G *ELL*NWAQGFNCQF+W Subject 2226 GFQLGGEEYWL*R*VERQGCIILLKTRDFTL*LQWWKPYKSRVA*VHGSDSKLHRWA*LLQFMPGSNL*RKFKIGPS*GR*ELL*NWAQGFNCQFDW 2516
Range 3: 2228 to 2515 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
214.1 bits(461) | 0.0 | 93/96(97%) | 0/96(0%) | Minus/Plus |
Query 2 ISTGW*GILALKIG*KAGVHHSSQNQGFHVIATMVEAIQV*GGLSSWIRF*APPVGVTTTIHAWLKSMKKIQNWPFIRMMRVAMKLGSRF*LSI*L 289 ISTGW*GILALKIG*KAGVHHSSQNQGFHVIATMVEAIQV*GGLSSWIRF*APPVGVTTTIHAW KSMKKIQNWPFIR MRVAMKLG+RF*LSI*L Subject 2228 ISTGW*GILALKIG*KAGVHHSSQNQGFHVIATMVEAIQV*GGLSSWIRF*APPVGVTTTIHAWFKSMKKIQNWPFIRTMRVAMKLGTRF*LSI*L 2515
Range 4: 2227 to 2514 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
209.6 bits(451) | 0.0 | 92/96(96%) | 0/96(0%) | Plus/Minus |
Query 3 N*IDS*NLEPSFIATLIILMKGQF*IFFIDLSQA*IVVVTPTGGA*NLIHELRPP*TCMASTIVAIT*NPWF*EE*CTPAFQPIFKANIPHHPVEI 290 N IDS*NL PSFIATLI+LMKGQF*IFFIDL+QA*IVVVTPTGGA*NLIHELRPP*TCMASTIVAIT*NPWF*EE*CTPAFQPIFKANIPHHPVEI Subject 2227 NQIDS*NLVPSFIATLIVLMKGQF*IFFIDLNQA*IVVVTPTGGA*NLIHELRPP*TCMASTIVAIT*NPWF*EE*CTPAFQPIFKANIPHHPVEI 2514
Range 5: 2276 to 2515 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.4 bits(418) | 0.0 | 77/80(96%) | 0/80(0%) | Plus/Minus |
Query 2 QLN*QLKP*AQFHSNSHHPYEGPILNFLHRFEPGMNCSSYAHRWSLESDP*T*ATLDLYGFHHCSYNVKSLVLRRMMHPC 241 Q N*QLKP AQFHSNSH PYEGPILNFLHRFEPGMNCSSYAHRWSLESDP*T*ATLDLYGFHHCSYNVKSLVLRRMMHPC Subject 2276 QSN*QLKPCAQFHSNSHRPYEGPILNFLHRFEPGMNCSSYAHRWSLESDP*T*ATLDLYGFHHCSYNVKSLVLRRMMHPC 2515
Range 6: 2223 to 2453 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
150.9 bits(323) | 0.0 | 75/77(97%) | 0/77(0%) | Plus/Minus |
Query 64 RANFEFSS*I*ARHEL**LRPPVELRI*SMNLGHPRLVWXXXXXXXREIPGFEKNDAPLPFNLSSKPIFLTTQLKST 294 RANFEFSS*I* RHEL**LRPPVELRI*SMNLGHPRLVWLPPL*L*REIPGFEKNDAPLPFNLSSKPIFLTTQLKS+ Subject 2223 RANFEFSS*I*TRHEL**LRPPVELRI*SMNLGHPRLVWLPPL*L*REIPGFEKNDAPLPFNLSSKPIFLTTQLKSS 2453
Grapevine rupestris stem pitting associated virus isolate Tannat Rspav1, complete genome
Sequence ID: KR528585.1 Length: 8595 Number of Matches: 6
Range 1: 2209 to 2496 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
225.6 bits(486) | 0.0 | 89/96(93%) | 0/96(0%) | Minus/Plus |
Query 3 DFNWVVRNIGFEDRLKGRGASFFSKPGISRYSYNGGSHTSLGWPKFMDQILSSTGGRNYYNSCLAQIYEENSKLALHKDDESCYETGLKVLTVNLI 290 +FNWVV+NIGF+DRL+GRGASFFSKPGIS YSYNGGSHTSLGWPKFMDQILSSTGGRNYYNSCLAQIYEENSKLALHKDDESCYETG KVLT+NLI Subject 2209 NFNWVVKNIGFKDRLRGRGASFFSKPGISCYSYNGGSHTSLGWPKFMDQILSSTGGRNYYNSCLAQIYEENSKLALHKDDESCYETGHKVLTINLI 2496
Range 2: 2210 to 2494 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
158.2 bits(339) | 0.0 | 71/95(75%) | 0/95(0%) | Minus/Plus |
Query 5 ISTGW*GILALKIG*KAGVHHSSQNQGFHVIATMVEAIQV*GGLSSWIRF*APPVGVTTTIHAWLKSMKKIQNWPFIRMMRVAMKLGSRF*LSI* 289 I TGW* L L+ G*+AGVHHSSQNQ FHVI TMV A *GG SSWIRF*AP V TTIHAWL+SM+KIQNW FIRMMRVAMKLG++F*L I* Subject 2210 ILTGW*RTLVLRTG*EAGVHHSSQNQEFHVIVTMVGATLA*GGQSSWIRF*APLADVITTIHAWLRSMRKIQNWLFIRMMRVAMKLGTKF*LLI* 2494
Range 3: 2211 to 2495 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
155.0 bits(332) | 0.0 | 72/95(76%) | 0/95(0%) | Minus/Plus |
Query 4 FQLGGEEYWL*R*VERQGCIILLKTRDFTL*LQWWKPYKSRVA*VHGSDSKLHRWA*LLQFMPGSNL*RKFKIGPS*G**ELL*NWAQGFNCQFN 288 F LGGEE+W * ERQGCIILLKTR+F L*LQWW+P+ RVA VHGSDSKLH *LLQFMPGS+L* KFKIG S*G**ELL*NWAQ F+ FN Subject 2211 F*LGGEEHWF*GQAERQGCIILLKTRNFML*LQWWEPH*LRVAKVHGSDSKLHWRT*LLQFMPGSDL*GKFKIGSS*G**ELL*NWAQSFDY*FN 2495
Range 4: 2209 to 2496 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
154.6 bits(331) | 0.0 | 71/96(74%) | 0/96(0%) | Plus/Minus |
Query 3 N*IDS*NLEPSFIATLIILMKGQF*IFFIDLSQA*IVVVTPTGGA*NLIHELRPP*TCMASTIVAIT*NPWF*EE*CTPAFQPIFKANIPHHPVEI 290 +*I+S N PSFIATLIILMK QF*IF IDLSQA*IVV+T GA*NLIHEL PP* +A TIV IT*N WF*EE*CTPA QP+ K N+ HHPV+I Subject 2209 D*INSQNFVPSFIATLIILMKSQF*IFLIDLSQA*IVVITSASGA*NLIHELWPP*ASVAPTIVTIT*NSWF*EE*CTPASQPVLKTNVLHHPVKI 2496
Range 5: 2258 to 2497 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
146.3 bits(313) | 0.0 | 60/80(75%) | 0/80(0%) | Plus/Minus |
Query 2 QLN*QLKP*AQFHSNSHHPYEGPILNFLHRFEPGMNCSSYAHRWSLESDP*T*ATLDLYGFHHCSYNVKSLVLRRMMHPC 241 +LN* K AQFHSNSHHPYE PILNF HR EPGMNCS+Y +WSLESDP*T ATL G HHC+YN+K LVLRRMMHPC Subject 2258 RLN**SKLCAQFHSNSHHPYEEPILNFPHRSEPGMNCSNYVRQWSLESDP*TLATLS*CGSHHCNYNMKFLVLRRMMHPC 2497
Range 6: 2211 to 2435 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
133.9 bits(286) | 0.0 | 67/75(89%) | 0/75(0%) | Plus/Minus |
Query 64 RANFEFSS*I*ARHEL**LRPPVELRI*SMNLGHPRLVWXXXXXXXREIPGFEKNDAPLPFNLSSKPIFLTTQLK 288 RANFEFSS*I*ARHEL**LRPPVELRI*SMN GHP+LVWLPPL*L* EIPGFEKNDAPLP +LS KP+F TTQLK Subject 2211 RANFEFSS*I*ARHEL**LRPPVELRI*SMNFGHPKLVWLPPL*L*HEIPGFEKNDAPLPLSLSLKPMFFTTQLK 2435
Grapevine Rupestris stem pitting associated virus, complete genome
Sequence ID: AF026278.1 Length: 8725 Number of Matches: 6
Range 1: 2227 to 2514 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
225.1 bits(485) | 0.0 | 89/96(93%) | 0/96(0%) | Minus/Plus |
Query 3 DFNWVVRNIGFEDRLKGRGASFFSKPGISRYSYNGGSHTSLGWPKFMDQILSSTGGRNYYNSCLAQIYEENSKLALHKDDESCYETGLKVLTVNLI 290 DFNWVV+NIGF+DRL+GRGASFFSKPGIS YSYNGGSHTSLGWPKFMDQILSSTGGRNYYNSCLAQIYEENSKLALHKDDESCYE G KVLT+NLI Subject 2227 DFNWVVKNIGFKDRLRGRGASFFSKPGISCYSYNGGSHTSLGWPKFMDQILSSTGGRNYYNSCLAQIYEENSKLALHKDDESCYEIGHKVLTINLI 2514
Range 2: 2228 to 2512 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
162.8 bits(349) | 0.0 | 73/95(77%) | 0/95(0%) | Minus/Plus |
Query 5 ISTGW*GILALKIG*KAGVHHSSQNQGFHVIATMVEAIQV*GGLSSWIRF*APPVGVTTTIHAWLKSMKKIQNWPFIRMMRVAMKLGSRF*LSI* 289 ISTGW* LK G*+AGVHHSSQNQ FHVI TMV A Q *GG SSWIRF*AP V TTIHAWL+SM+KIQNW FIRMMRVAMKLG++F*L I* Subject 2228 ISTGW*RTSVLKTG*EAGVHHSSQNQEFHVIVTMVGATQA*GGQSSWIRF*APLADVITTIHAWLRSMRKIQNWLFIRMMRVAMKLGTKF*LLI* 2512
Range 3: 2226 to 2513 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
160.5 bits(344) | 0.0 | 74/96(77%) | 0/96(0%) | Minus/Plus |
Query 4 GFQLGGEEYWL*R*VERQGCIILLKTRDFTL*LQWWKPYKSRVA*VHGSDSKLHRWA*LLQFMPGSNL*RKFKIGPS*G**ELL*NWAQGFNCQFN 291 GFQLGGEE+ *R ERQGCIILLKTR+F L*LQWW+P+K RVA VHGSDSKLH *LLQFMPGS+L* KFKIG S*G**ELL*NWAQ F+ F+ Subject 2226 GFQLGGEEHRF*RQAERQGCIILLKTRNFML*LQWWEPHKLRVAKVHGSDSKLHWRT*LLQFMPGSDL*GKFKIGSS*G**ELL*NWAQSFDY*FD 2513
Range 4: 2227 to 2508 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
159.1 bits(341) | 0.0 | 71/94(76%) | 0/94(0%) | Plus/Minus |
Query 9 IDS*NLEPSFIATLIILMKGQF*IFFIDLSQA*IVVVTPTGGA*NLIHELRPP*TCMASTIVAIT*NPWF*EE*CTPAFQPIFKANIPHHPVEI 290 I+S N P+FIATLIILMK QF*IF IDLSQA*IVV+T GA*NLIHEL PP* C+A TIV IT*N WF*EE*CTPA QP+FK ++ HHPVEI Subject 2227 INSQNFVPNFIATLIILMKSQF*IFLIDLSQA*IVVITSASGA*NLIHELWPP*ACVAPTIVTIT*NSWF*EE*CTPASQPVFKTDVLHHPVEI 2508
Range 5: 2276 to 2488 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
148.2 bits(317) | 0.0 | 57/71(80%) | 0/71(0%) | Plus/Minus |
Query 29 AQFHSNSHHPYEGPILNFLHRFEPGMNCSSYAHRWSLESDP*T*ATLDLYGFHHCSYNVKSLVLRRMMHPC 241 AQFHSNSHHPYE PILNF HR EPGMNCS+Y +WSLESDP*T ATL L G HHC+YN+K LVLRRMMHPC Subject 2276 AQFHSNSHHPYEEPILNFPHRSEPGMNCSNYVRQWSLESDP*TLATLSLCGSHHCNYNMKFLVLRRMMHPC 2488
Range 6: 2223 to 2453 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
136.2 bits(291) | 0.0 | 68/77(88%) | 0/77(0%) | Plus/Minus |
Query 64 RANFEFSS*I*ARHEL**LRPPVELRI*SMNLGHPRLVWXXXXXXXREIPGFEKNDAPLPFNLSSKPIFLTTQLKST 294 RANFEFSS*I*ARHEL**LRPPVELRI*SMN GHP+LVWLPPL*L* EIPGFEKNDAPLP +LS KP+F TTQLKS+ Subject 2223 RANFEFSS*I*ARHEL**LRPPVELRI*SMNFGHPKLVWLPPL*L*HEIPGFEKNDAPLPLSLSLKPMFFTTQLKSS 2453
Grapevine rupestris stem pitting associated virus complete genome, isolate PG, genomic RNA
Sequence ID: HE591388.1 Length: 8725 Number of Matches: 6
Range 1: 2227 to 2514 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
225.1 bits(485) | 0.0 | 89/96(93%) | 0/96(0%) | Minus/Plus |
Query 3 DFNWVVRNIGFEDRLKGRGASFFSKPGISRYSYNGGSHTSLGWPKFMDQILSSTGGRNYYNSCLAQIYEENSKLALHKDDESCYETGLKVLTVNLI 290 DFNWVV+NIGF+DRL+GRGASFFSKPGIS YSYNGGSHTSLGWPKFMDQILSSTGGRNYYNSCLAQIYEENSKLALHKDDESCYE G KVLT+NLI Subject 2227 DFNWVVKNIGFKDRLRGRGASFFSKPGISCYSYNGGSHTSLGWPKFMDQILSSTGGRNYYNSCLAQIYEENSKLALHKDDESCYEIGHKVLTINLI 2514
Range 2: 2226 to 2513 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
162.8 bits(349) | 0.0 | 74/96(77%) | 0/96(0%) | Minus/Plus |
Query 4 GFQLGGEEYWL*R*VERQGCIILLKTRDFTL*LQWWKPYKSRVA*VHGSDSKLHRWA*LLQFMPGSNL*RKFKIGPS*G**ELL*NWAQGFNCQFN 291 GF LGGEE+W *R ERQGCIILLKTR+F L*LQWW+P+K RVA VHGSDSKLH *LLQFMPGS+L* KFKIG S*G**ELL*NWAQ F+ F+ Subject 2226 GF*LGGEEHWF*RQAERQGCIILLKTRNFML*LQWWEPHKLRVAKVHGSDSKLHWRT*LLQFMPGSDL*GKFKIGSS*G**ELL*NWAQSFDY*FD 2513
Range 3: 2228 to 2512 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
162.8 bits(349) | 0.0 | 73/95(77%) | 0/95(0%) | Minus/Plus |
Query 5 ISTGW*GILALKIG*KAGVHHSSQNQGFHVIATMVEAIQV*GGLSSWIRF*APPVGVTTTIHAWLKSMKKIQNWPFIRMMRVAMKLGSRF*LSI* 289 I TGW* L LK G*+AGVHHSSQNQ FHVI TMV A Q *GG SSWIRF*AP V TTIHAWL+SM+KIQNW FIRMMRVAMKLG++F*L I* Subject 2228 ILTGW*RTLVLKTG*EAGVHHSSQNQEFHVIVTMVGATQA*GGQSSWIRF*APLADVITTIHAWLRSMRKIQNWLFIRMMRVAMKLGTKF*LLI* 2512
Range 4: 2227 to 2508 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
159.6 bits(342) | 0.0 | 71/94(76%) | 0/94(0%) | Plus/Minus |
Query 9 IDS*NLEPSFIATLIILMKGQF*IFFIDLSQA*IVVVTPTGGA*NLIHELRPP*TCMASTIVAIT*NPWF*EE*CTPAFQPIFKANIPHHPVEI 290 I+S N P+FIATLIILMK QF*IF IDLSQA*IVV+T GA*NLIHEL PP* C+A TIV IT*N WF*EE*CTPA QP+FK N+ HHPV+I Subject 2227 INSQNFVPNFIATLIILMKSQF*IFLIDLSQA*IVVITSASGA*NLIHELWPP*ACVAPTIVTIT*NSWF*EE*CTPASQPVFKTNVLHHPVKI 2508
Range 5: 2276 to 2488 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
148.2 bits(317) | 0.0 | 57/71(80%) | 0/71(0%) | Plus/Minus |
Query 29 AQFHSNSHHPYEGPILNFLHRFEPGMNCSSYAHRWSLESDP*T*ATLDLYGFHHCSYNVKSLVLRRMMHPC 241 AQFHSNSHHPYE PILNF HR EPGMNCS+Y +WSLESDP*T ATL L G HHC+YN+K LVLRRMMHPC Subject 2276 AQFHSNSHHPYEEPILNFPHRSEPGMNCSNYVRQWSLESDP*TLATLSLCGSHHCNYNMKFLVLRRMMHPC 2488
Range 6: 2223 to 2453 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
136.2 bits(291) | 0.0 | 68/77(88%) | 0/77(0%) | Plus/Minus |
Query 64 RANFEFSS*I*ARHEL**LRPPVELRI*SMNLGHPRLVWXXXXXXXREIPGFEKNDAPLPFNLSSKPIFLTTQLKST 294 RANFEFSS*I*ARHEL**LRPPVELRI*SMN GHP+LVWLPPL*L* EIPGFEKNDAPLP +LS KP+F TTQLKS+ Subject 2223 RANFEFSS*I*ARHEL**LRPPVELRI*SMNFGHPKLVWLPPL*L*HEIPGFEKNDAPLPLSLSLKPMFFTTQLKSS 2453
Nucleotide Sequence (739 letters)
Query ID: | ds2016-133_14 |
Query definition: | No definition line |
Query length: | 603 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
553.2 | 2920.1 | 37% | 1.41e-155 | 89% | AY368590.1 | |
546.8 | 2732.6 | 37% | 1.209e-153 | 80% | AB277783.1 | |
545.0 | 2768.0 | 37% | 4.286e-153 | 81% | KX274275.1 | |
506.5 | 1606.3 | 40% | 1.654e-141 | 42% | AF026278.1 | |
504.2 | 1590.3 | 40% | 8.094e-141 | 41% | AB277785.1 |
Alignments
Rupestris stem pitting associated virus strain Syrah, complete genome
Sequence ID: AY368590.1 Length: 8742 Number of Matches: 9
Range 1: 6373 to 7110 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
553.2 bits(1201) | 0.0 | 234/246(95%) | 0/246(0%) | Minus/Plus |
Query 2 CIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHDVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVNDFSDFDVLFSDPYQNISVPRVALFMKSKSCRFGNNGC*FLLSFGFDVHSDRFDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKL 739 CIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWH IIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVNDFSDFDVLFSDPYQNISVPR A F+KSK+CRFG N C +LLSFGFDVHSDR DEVITGSPFELDVEGVLICFGKEAV+LAAAHNSDFKL Subject 6373 CIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHY*IIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVNDFSDFDVLFSDPYQNISVPREAHFIKSKTCRFGKNTCKYLLSFGFDVHSDRSDEVITGSPFELDVEGVLICFGKEAVNLAAAHNSDFKL 7110
Range 2: 6373 to 7110 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
526.6 bits(1143) | 0.0 | 221/246(90%) | 0/246(0%) | Plus/Minus |
Query 2 KFEI*IMRSSQINCLLAKAN*HTLNIQLKWRTCNHFIKPVTMHIKTKG*KELTSIITKPARL*LHEESHPWNTDILIWVRE*HVKIRKVIHRQILIKYVYLPFYSAARRVWLDVPPREIWSVGNAGRKSYETLVFSDELSYQTTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHIMPNT*GLIYSFKQPRN*APHLVLISNQEPHTIVVCFNFLFIHHLN*QLAQPVGIGHLNCIIINA 739 KFEI*IMRS Q+NCLLAKAN*HTLNIQLKW TCNHFI+PVTMHIKTKG*K LT I KPA L*L+E S PWNTDILIWVRE*HVKIRKVIHRQILI+YVYLPFYS RRVWLDVPPR++WSVGNAGR+SYETLVFS+ELSYQTTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNN IMPNT*GLIYSFKQ RN*A HLVLISNQEPHT+VV FNFLFIHH N*QLAQPVGIGHLNCIIINA Subject 6373 KFEI*IMRSCQVNCLLAKAN*HTLNIQLKW*TCNHFIRPVTMHIKTKG*KVLTCIFAKPAGL*LYEVSLPWNTDILIWVRE*HVKIRKVIHRQILIEYVYLPFYSTTRRVWLDVPPRKVWSVGNAGRESYETLVFSNELSYQTTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNLIMPNT*GLIYSFKQSRN*ASHLVLISNQEPHTVVVRFNFLFIHHFN*QLAQPVGIGHLNCIIINA 7110
Range 3: 6374 to 7111 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
516.1 bits(1120) | 0.0 | 219/246(89%) | 0/246(0%) | Plus/Minus |
Query 1 EV*NLNYAQQPNQLPPCQSKLAHPQHPTQMENL*SLHQTCHYAHQNQRIEGTNIHYYQTCKTLTS*REPPLEH*YFDMGQRIARQNQKSHSQTDTHQVCLSSLLQRSQESMA*CTSQRDLECRERRP*KL*NSRLQ**ALLSNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*PGTAHNCSVLQLPLHSSSQLTTRPACRHRTPQLHNYQC 738 EV*NLNYAQ P+ LPPCQSKLAHPQHPTQM NL*SLHQTCHYAHQNQRIEGT +++ QTC++LT * EPPLEH*YFDMGQRI RQNQKSHSQTDTH+VCLSSLLQ +QESMA*CTSQ+ LECRERRP*KL*NSRLQ**ALLSNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**S++AKHLRPNL*LQT QKLS SSCAYF*PGTAH+CS LQLPLHSS QLTTRP CRHRTPQLHNYQC Subject 6374 EV*NLNYAQLPS*LPPCQSKLAHPQHPTQMVNL*SLHQTCHYAHQNQRIEGTYMYFCQTCRSLTL*SEPPLEH*YFDMGQRITRQNQKSHSQTDTHRVCLSSLLQHNQESMA*CTSQKGLECRERRP*KL*NSRLQ**ALLSNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SNNAKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQLPLHSSFQLTTRPTCRHRTPQLHNYQC 7111
Range 4: 6675 to 7109 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
290.7 bits(628) | 0.0 | 129/145(89%) | 0/145(0%) | Minus/Plus |
Query 3 *K*FDKRAHH*RREFHSFYGRRSRHSKSLWEVHQAILSWLRCKREDKHT**VSVCE*LF*F*RAIL*PISKYQCSKGGSLHEVKVLQVW**WMLVPSILWF*CA**QV**SDYRFSI*VGC*GCANLLWQGGS*FGCCA*FRFQT 437 *K*FDKRAH+*RREFHSF+GRRSRHSK WEVHQAILSWL CKREDKHT *VSVCE*LF*F*R IL*PISKYQCSKGGSLH+VK LQVW +M VPSILWF*CA**QV**SDYRF+I*VGC*GCANLLWQGGS* G CA*FRFQT Subject 6675 *K*FDKRAHY*RREFHSFHGRRSRHSKPFWEVHQAILSWLCCKREDKHTR*VSVCE*LF*F*RVIL*PISKYQCSKGGSLHKVKDLQVWQKYM*VPSILWF*CA**QV**SDYRFTI*VGC*GCANLLWQGGS*LGSCA*FRFQT 7109
Range 5: 6375 to 6641 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
179.8 bits(386) | 0.0 | 82/89(92%) | 0/89(0%) | Minus/Plus |
Query 471 H**LCN*GVLCLQAGRVVN*DDE*RGS*STLQLCAVPG*K*AQDEVLNFWVV*SYRLGLKCLA*CDYYE*LS*SFVYV*VCGCL*RAQI 737 H**LCN*GVLCLQ GRVVN*+DE*RGS*S LQLCAVPG*K*AQDE+LNFW+V*SYRLGLKCLA DYYE*LS*SFVYV*VCGCL*RAQI Subject 6375 H**LCN*GVLCLQVGRVVN*NDE*RGS*SALQLCAVPG*K*AQDEMLNFWIV*SYRLGLKCLALLDYYE*LS*SFVYV*VCGCL*RAQI 6641
Range 6: 6684 to 7109 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
299.4 bits(647) | 0.0 | 132/142(93%) | 0/142(0%) | Plus/Minus |
Query 3 SLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSNLSLCTSKPKDRRN*HPLLPNLQDFDFMKRATLGTLIF*YGSENSTSKSEKSFTDRYSSSMFIFPFTAQPGEYGLMYLPERFGVSGTPAVKAMKLSSSVMSSLIK 428 SLKSELCAAAK TASLPKQISTPSTSNSNGEPVITSS+LSLCTSKPKDRR H LPNLQ FDFMK A+LGTLIF*YGSEN+TSKSEKSFTDRYSSSMFIFPFTAQPGEYGLMYLPERFGVSGTPAVKAMKLSSSVMSSLIK Subject 6684 SLKSELCAAAKLTASLPKQISTPSTSNSNGEPVITSSDLSLCTSKPKDRRYLHVFLPNLQVFDFMK*ASLGTLIF*YGSENNTSKSEKSFTDRYSSSMFIFPFTAQPGEYGLMYLPERFGVSGTPAVKAMKLSSSVMSSLIK 7109
Range 7: 6375 to 6605 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
156.4 bits(335) | 0.0 | 74/77(96%) | 0/77(0%) | Plus/Minus |
Query 507 VDKALTKLFIIITSCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSM 737 VDKALTKLFIII CQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSP+L*A*DTSIA*LSM Subject 6375 VDKALTKLFIII**CQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSM 6605
Range 8: 6611 to 7054 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
262.2 bits(566) | 0.0 | 131/148(89%) | 0/148(0%) | Minus/Plus |
Query 58 SLWVFIACSDFQLLFIAFLXXXXXXX*ESSSLKTRVS*LLRPAFPTLQISLGGTSSHTLLAAL*KGR*TYLMSICL*MTFLILTCYSLTHIKISVFQGWLSS*SQSLAGLVIMDVSSFYPLVLMCIVTGLMK*LQVLHLSWMLRVC*F 501 SLWVFIACSDFQLLFIAFLVVVKVV**ESS LKTRVS*L RPAFPTLQ LGGTSSHTLL L*KGR*TY MSICL*MTFLILTCYSLTHIKISVFQG L+S*SQ AGL + VS+FYPLVLMCIVTGLMK*LQV HLSWMLRVC*F Subject 6611 SLWVFIACSDFQLLFIAFLVVVKVV**ESSLLKTRVS*LSRPAFPTLQTFLGGTSSHTLLVVL*KGR*TYSMSICL*MTFLILTCYSLTHIKISVFQGRLTS*SQRPAGLAKIHVSTFYPLVLMCIVTGLMK*LQVHHLSWMLRVC*F 7054
Range 9: 6374 to 6568 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
135.8 bits(290) | 0.0 | 58/65(89%) | 0/65(0%) | Minus/Plus |
Query 544 ALIIMQLRCPMPTGWASCQLR**MKRKLKHTTIVCGSWLEISTR*GAQFLGCLKL*IRP*VFGMM 738 ALIIMQLRCPMPTGWASCQL+**MKRKLK TT VCGSWLEISTR* AQFL CLKL*IRP*VFG++ Subject 6374 ALIIMQLRCPMPTGWASCQLK**MKRKLKRTTTVCGSWLEISTR*DAQFLDCLKL*IRP*VFGII 6568
Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OB1
Sequence ID: AB277783.1 Length: 2876 Number of Matches: 8
Range 1: 629 to 1366 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
546.8 bits(1187) | 0.0 | 228/246(93%) | 0/246(0%) | Minus/Plus |
Query 2 CIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHDVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVNDFSDFDVLFSDPYQNISVPRVALFMKSKSCRFGNNGC*FLLSFGFDVHSDRFDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKL 739 CIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALS+WH VIIMNNLVKALSTFEFVG+YSVLRFPVVVHSVPGSGKSSLIREL+TEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSV+D S FDVLFSDPYQNISVPR A F+KSK+CRFG N C +LLSFGF++HSDR DEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKL Subject 629 CIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHGVIIMNNLVKALSTFEFVGIYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKL 1366
Range 2: 629 to 1366 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
485.9 bits(1054) | 0.0 | 204/246(83%) | 0/246(0%) | Plus/Minus |
Query 2 KFEI*IMRSSQINCLLAKAN*HTLNIQLKWRTCNHFIKPVTMHIKTKG*KELTSIITKPARL*LHEESHPWNTDILIWVRE*HVKIRKVIHRQILIKYVYLPFYSAARRVWLDVPPREIWSVGNAGRKSYETLVFSDELSYQTTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHIMPNT*GLIYSFKQPRN*APHLVLISNQEPHTIVVCFNFLFIHHLN*QLAQPVGIGHLNCIIINA 739 KFEI IMRS INCLLAKAN HTLNIQLKWR CNHFI+PVTM IKTKG K LT I K A L*L+E S PWNTDILIWVR+*HVK R V +RQILIKYVYLP YS RRVWL+VPPRE+ SVGNAGRK YETLV SD+ SY T FTTTRNA+NNNWKSEHAINTHKLKRRQSFN*VIHNNH MPNT*GLIYSFKQPRN*APHLV ISN EPHT+VVCFNFLFIHH N*QLAQPVGIG+LNCI+INA Subject 629 KFEIGIMRSR*INCLLAKANQHTLNIQLKWRACNHFIRPVTMQIKTKGQKVLTCIFAKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYLPLYSTTRRVWLNVPPREVGSVGNAGRKGYETLVLSDKFSY*TAFTTTRNAVNNNWKSEHAINTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQPRN*APHLVFISN*EPHTVVVCFNFLFIHHFN*QLAQPVGIGYLNCIVINA 1366
Range 3: 630 to 1367 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
468.4 bits(1016) | 0.0 | 203/246(83%) | 0/246(0%) | Plus/Minus |
Query 1 EV*NLNYAQQPNQLPPCQSKLAHPQHPTQMENL*SLHQTCHYAHQNQRIEGTNIHYYQTCKTLTS*REPPLEH*YFDMGQRIARQNQKSHSQTDTHQVCLSSLLQRSQESMA*CTSQRDLECRERRP*KL*NSRLQ**ALLSNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*PGTAHNCSVLQLPLHSSSQLTTRPACRHRTPQLHNYQC 738 EV*N NYAQ NQLPPCQSK AHPQHPTQM +L*SLHQTCHYA+ NQR EGT +++ Q C++LT * EPPLEH*YFDMGQ+I RQNQK H QTDTHQVCLSS LQ +QESMA*CTSQR ECRERRP*+L*NSR Q* LL N FYHYQER EQQLEI*ARYK+PQTQT*TKL*LSYS**SHHAK+LRPNL*LQTTQKLSTSSC YF* GTAH+CSVLQLPLHSS QLTTRPACRHR PQLH+YQC Subject 630 EV*NRNYAQPLNQLPPCQSKSAHPQHPTQMASL*SLHQTCHYAN*NQRTEGTYMYFRQICRSLTL*SEPPLEH*YFDMGQKITRQNQKCHLQTDTHQVCLSSPLQHNQESMA*CTSQRGWECRERRP*RL*NSRPQ*QVLLLNCFYHYQERCEQQLEI*ARYKYPQTQT*TKL*LSYS**SHHAKYLRPNL*LQTTQKLSTSSCVYF*LGTAHSCSVLQLPLHSSFQLTTRPACRHRIPQLHSYQC 1367
Range 4: 940 to 1365 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
280.6 bits(606) | 0.0 | 125/142(88%) | 0/142(0%) | Plus/Minus |
Query 3 SLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSNLSLCTSKPKDRRN*HPLLPNLQDFDFMKRATLGTLIF*YGSENSTSKSEKSFTDRYSSSMFIFPFTAQPGEYGLMYLPERFGVSGTPAVKAMKLSSSVMSSLIK 428 SLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSS+LSLC KPKDRR H PNLQ FDFMK A+LGTLIF*YGSEN+TSK E S TDRYSSSMFIFPFTAQPGEYGLMYLPER GVSGTPAVKAMKLSSSV SSLIK Subject 940 SLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLIF*YGSENNTSKPEMSLTDRYSSSMFIFPFTAQPGEYGLMYLPERLGVSGTPAVKAMKLSSSVTSSLIK 1365
Range 5: 631 to 861 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
160.5 bits(344) | 0.0 | 75/77(97%) | 0/77(0%) | Plus/Minus |
Query 507 VDKALTKLFIIITSCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSM 737 VDKALTKLFIIIT CQ LKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSM Subject 631 VDKALTKLFIIITPCQILKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSM 861
Range 6: 631 to 1365 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
418.0 bits(906) | 0.0 | 207/245(84%) | 0/245(0%) | Minus/Plus |
Query 3 H**LCN*GVLCLQAGRVVN*DDE*RGS*STLQLCAVPG*K*AQDEVLNFWVV*SYRLGLKCLA*CDYYE*LS*SFVYV*VCGCL*RAQIXXXXXXXXXXW*K*FDKRAHH*RREFHSFYGRRSRHSKSLWEVHQAILSWLRCKREDKHT**VSVCE*LF*F*RAIL*PISKYQCSKGGSLHEVKVLQVW**WMLVPSILWF*CA**QV**SDYRFSI*VGC*GCANLLWQGGS*FGCCA*FRFQT 737 H**LCN*G+LCLQAGRVVN*+DE*RGS*STLQLCAVP *K* QDEVLNFWVV*SYRLGLK LA CDYYE*LS*SFVYV*VCG L*RAQISSCCS RSW*W*K F+KR H* REFHS YGRRSRHS+ LWEVH AILSWL CK EDKHT**VSVC+* F F*R I *PISKYQCSKGGSLH+VK LQ+W +M VPS+LWF* A**QV**SDYR +I*VGC*GCA+LLWQGGS*F CA*FRFQT Subject 631 H**LCN*GILCLQAGRVVN*NDE*RGS*STLQLCAVPS*K*TQDEVLNFWVV*SYRLGLKYLAWCDYYE*LS*SFVYV*VCGYL*RAQISSCCSQRSW*W*KQFNKRTCH*GREFHSLYGRRSRHSQPLWEVH*AILSWLCCKGEDKHT**VSVCK*HFWF*RVIF*PISKYQCSKGGSLHKVKDLQIWRKYM*VPSVLWF*FA**QV**SDYRLAI*VGC*GCADLLWQGGS*FSGCA*FRFQT 1365
Range 7: 867 to 1310 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
239.8 bits(517) | 0.0 | 119/148(80%) | 0/148(0%) | Minus/Plus |
Query 58 SLWVFIACSDFQLLFIAFLXXXXXXX*ESSSLKTRVS*LLRPAFPTLQISLGGTSSHTLLAAL*KGR*TYLMSICL*MTFLILTCYSLTHIKISVFQGWLSS*SQSLAGLVIMDVSSFYPLVLMCIVTGLMK*LQVLHLSWMLRVC*F 501 SLWVFIACSDFQLLF AFLVVVK V**E+ SL+TRVS* LRPAFPTL SLGGT SHTLL L*+GR*TYLMSICL*+TFL+LTCY LTHIKISVFQG L+S*SQ A L + VS+F PLVL+CIVTGLMK*LQ HLSWMLRVC*F Subject 867 SLWVFIACSDFQLLFTAFLVVVKAV**ENLSLRTRVS*PLRPAFPTLPTSLGGTLSHTLLVVL*RGR*TYLMSICL*VTFLVLTCYFLTHIKISVFQGRLTS*SQRPADLAKIHVSTFCPLVLICIVTGLMK*LQARHLSWMLRVC*F 1310
Range 8: 630 to 827 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
132.6 bits(283) | 0.0 | 59/66(89%) | 0/66(0%) | Minus/Plus |
Query 541 ALIIMQLRCPMPTGWASCQLR**MKRKLKHTTIVCGSWLEISTR*GAQFLGCLKL*IRP*VFGMM* 738 ALI MQLR PMPTGWASCQL+**MKRKLKHTT VCGS LEI+TR*GAQFLGCLKL*IRP*VFGM+* Subject 630 ALITMQLRYPMPTGWASCQLK**MKRKLKHTTTVCGS*LEINTR*GAQFLGCLKL*IRP*VFGMV* 827
Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome
Sequence ID: KX274275.1 Length: 8724 Number of Matches: 9
Range 1: 6373 to 7110 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
545.0 bits(1183) | 0.0 | 228/246(93%) | 0/246(0%) | Minus/Plus |
Query 2 CIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHDVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVNDFSDFDVLFSDPYQNISVPRVALFMKSKSCRFGNNGC*FLLSFGFDVHSDRFDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKL 739 CIDNYAIEVSYAYRLGEL+IEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWH VIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIREL+TEDE+FIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSV+D S FDVLFSDPYQNISVPR A F+KSK+CRFG N C +LLSFGF++HSDR DEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKL Subject 6373 CIDNYAIEVSYAYRLGELAIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELVTEDENFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKL 7110
Range 2: 6373 to 7110 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
490.4 bits(1064) | 0.0 | 207/246(84%) | 0/246(0%) | Plus/Minus |
Query 2 KFEI*IMRSSQINCLLAKAN*HTLNIQLKWRTCNHFIKPVTMHIKTKG*KELTSIITKPARL*LHEESHPWNTDILIWVRE*HVKIRKVIHRQILIKYVYLPFYSAARRVWLDVPPREIWSVGNAGRKSYETLVFSDELSYQTTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHIMPNT*GLIYSFKQPRN*APHLVLISNQEPHTIVVCFNFLFIHHLN*QLAQPVGIGHLNCIIINA 739 KFEI IMRS INCLLAKAN*HTLNIQLKWRTCNHFI+PVTM IKTKG K LT I K A L*L+E S PWNTDILIWVR+*HVK R V +RQILIKYVYLPFYS RRVWLDVPPRE+ V NAGRK YE LV SD+ SY TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNH MPNT*GLIYSFKQPRN*APHLVLISN EPHT+VVCFNFLFIHH N QLAQPVGIG+LNCI+INA Subject 6373 KFEIRIMRSR*INCLLAKAN*HTLNIQLKWRTCNHFIRPVTMQIKTKGQKVLTCIFAKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYLPFYSTTRRVWLDVPPREVGCVRNAGRKGYEILVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQPRN*APHLVLISN*EPHTVVVCFNFLFIHHFNCQLAQPVGIGYLNCIVINA 7110
Range 3: 6374 to 7111 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
484.5 bits(1051) | 0.0 | 208/246(85%) | 0/246(0%) | Plus/Minus |
Query 1 EV*NLNYAQQPNQLPPCQSKLAHPQHPTQMENL*SLHQTCHYAHQNQRIEGTNIHYYQTCKTLTS*REPPLEH*YFDMGQRIARQNQKSHSQTDTHQVCLSSLLQRSQESMA*CTSQRDLECRERRP*KL*NSRLQ**ALLSNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*PGTAHNCSVLQLPLHSSSQLTTRPACRHRTPQLHNYQC 738 EV*N NYAQ NQLPPCQSKLAHPQHPTQM NL*SLHQTCHYA+ NQR EGT +++ Q C++LT * EPPLEH*YFDMGQ+I RQNQK H QTDTHQVCLSSLLQ +QESMA*CTSQR C+ERRP*+L*NSR Q* LL NYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF* GTAH+CSVLQLPLHSS QL TRPACRHR PQLH+YQC Subject 6374 EV*NQNYAQPLNQLPPCQSKLAHPQHPTQMANL*SLHQTCHYAN*NQRTEGTYMYFRQICRSLTL*SEPPLEH*YFDMGQKITRQNQKCHLQTDTHQVCLSSLLQHNQESMA*CTSQRGWVCQERRP*RL*NSRPQ*QVLLLNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*LGTAHSCSVLQLPLHSSFQLPTRPACRHRIPQLHSYQC 7111
Range 4: 6675 to 7109 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
257.2 bits(555) | 0.0 | 117/145(81%) | 0/145(0%) | Minus/Plus |
Query 3 *K*FDKRAHH*RREFHSFYGRRSRHSKSLWEVHQAILSWLRCKREDKHT**VSVCE*LF*F*RAIL*PISKYQCSKGGSLHEVKVLQVW**WMLVPSILWF*CA**QV**SDYRFSI*VGC*GCANLLWQGGS*FGCCA*FRFQT 437 *K*F+KR H* REFHS YGRRS H++ LWEVHQAILSWL CKREDKHT**VSVC+* F F*R I *PISKYQCSKGGSLH+VK LQ+W +M VPS+LWF* A**QV**SDYRF+I*VGC*GCANLLWQGGS*F CA*F FQT Subject 6675 *K*FNKRTCH*GREFHSLYGRRS*HTQPLWEVHQAILSWLCCKREDKHT**VSVCK*HFWF*RVIF*PISKYQCSKGGSLHKVKDLQIWRKYM*VPSVLWF*FA**QV**SDYRFAI*VGC*GCANLLWQGGS*FSGCA*F*FQT 7109
Range 5: 6375 to 6641 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
183.9 bits(395) | 0.0 | 84/89(94%) | 0/89(0%) | Minus/Plus |
Query 471 H**LCN*GVLCLQAGRVVN*DDE*RGS*STLQLCAVPG*K*AQDEVLNFWVV*SYRLGLKCLA*CDYYE*LS*SFVYV*VCGCL*RAQI 737 H**LCN*G+LCLQAGRV N*+DE*RGS*STLQLCAVP *K*AQDEVLNFWVV*SYRLGLKCLA CDYYE*LS*SFVYV*VCGCL*RAQI Subject 6375 H**LCN*GILCLQAGRVGN*NDE*RGS*STLQLCAVPS*K*AQDEVLNFWVV*SYRLGLKCLAWCDYYE*LS*SFVYV*VCGCL*RAQI 6641
Range 6: 6684 to 7109 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
278.7 bits(602) | 0.0 | 124/142(87%) | 0/142(0%) | Plus/Minus |
Query 3 SLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSNLSLCTSKPKDRRN*HPLLPNLQDFDFMKRATLGTLIF*YGSENSTSKSEKSFTDRYSSSMFIFPFTAQPGEYGLMYLPERFGVSGTPAVKAMKLSSSVMSSLIK 428 SLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSS+LSLC KPKDRR H PNLQ FDFMK A+LGTLIF*YGSEN+TSK E S TDRYSSSMFIFPFTAQPGEYGLMYLPER GVSGTPAVKAMK SSSV SSLIK Subject 6684 SLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLIF*YGSENNTSKPEMSLTDRYSSSMFIFPFTAQPGEYGLMYLPERLGVSGTPAVKAMKFSSSVTSSLIK 7109
Range 7: 6375 to 6605 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
159.6 bits(342) | 0.0 | 75/77(97%) | 0/77(0%) | Plus/Minus |
Query 507 VDKALTKLFIIITSCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSM 737 VDKALTKLFIIIT CQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISI NSPSL*A*DTSIA*LSM Subject 6375 VDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIANSPSL*A*DTSIA*LSM 6605
Range 8: 6611 to 7054 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
239.8 bits(517) | 0.0 | 121/148(82%) | 0/148(0%) | Minus/Plus |
Query 58 SLWVFIACSDFQLLFIAFLXXXXXXX*ESSSLKTRVS*LLRPAFPTLQISLGGTSSHTLLAAL*KGR*TYLMSICL*MTFLILTCYSLTHIKISVFQGWLSS*SQSLAGLVIMDVSSFYPLVLMCIVTGLMK*LQVLHLSWMLRVC*F 501 SLWVFIACSDFQLLFIAFLVVVKVV**E+ SL+TR+S* LRPAF T SLGGTSSHTLL L*KGR*TYLMSICL*+TFL+LTCY LTHIKISVFQG L+S*SQ A L + VS+F PLVL+CIVTGLMK*LQV HLSWMLRVC*F Subject 6611 SLWVFIACSDFQLLFIAFLVVVKVV**ENLSLRTRIS*PLRPAFLTHPTSLGGTSSHTLLVVL*KGR*TYLMSICL*VTFLVLTCYFLTHIKISVFQGRLTS*SQRPADLAKIHVSTFCPLVLICIVTGLMK*LQVRHLSWMLRVC*F 7054
Range 9: 6374 to 6571 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.9 bits(275) | 0.0 | 59/66(89%) | 0/66(0%) | Minus/Plus |
Query 541 ALIIMQLRCPMPTGWASCQLR**MKRKLKHTTIVCGSWLEISTR*GAQFLGCLKL*IRP*VFGMM* 738 ALI MQLR PMPTGWAS QL+**MKRKLKHTT VCGS LEISTR*GAQFLGCLKL*IRP*VFGM+* Subject 6374 ALITMQLRYPMPTGWASWQLK**MKRKLKHTTTVCGS*LEISTR*GAQFLGCLKL*IRP*VFGMV* 6571
Grapevine Rupestris stem pitting associated virus, complete genome
Sequence ID: AF026278.1 Length: 8725 Number of Matches: 11
Range 1: 6373 to 7110 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
506.5 bits(1099) | 0.0 | 210/246(85%) | 0/246(0%) | Minus/Plus |
Query 2 CIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHDVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVNDFSDFDVLFSDPYQNISVPRVALFMKSKSCRFGNNGC*FLLSFGFDVHSDRFDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKL 739 CIDNYAIEVSYAYRLGELSIEMM EEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALS+WH + IMNNLVKALSTFEFVGV+SVL+FPVV+HSVPGSGKSSLIRELI+EDE+FIAFTAGVPD+PNL+GRYIKPYSPGCAV GK+NILDEYLSV DFS FDVLFSDPYQNIS+P+ A F+KSK+CRFG N C +L SFGF V SD D+VI GSPF LDVEGVLICFGKEAVDLA AHNS+FKL Subject 6373 CIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHYLSIMNNLVKALSTFEFVGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDKVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKL 7110
Range 2: 6684 to 7109 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
216.0 bits(465) | 0.0 | 98/142(69%) | 0/142(0%) | Plus/Minus |
Query 3 SLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSNLSLCTSKPKDRRN*HPLLPNLQDFDFMKRATLGTLIF*YGSENSTSKSEKSFTDRYSSSMFIFPFTAQPGEYGLMYLPERFGVSGTPAVKAMKLSSSVMSSLIK 428 +L SELCA A+STASLPK ISTPSTS+ G+P +T S SL T KPK+ R PNLQ FD MK A+LG L+F YGSENSTSK EKS+TD+YSSSMF FP TA PGE GLMYLP R G+SGTPAVKAMK SSS +SSLIK Subject 6684 NLNSELCATARSTASLPKHISTPSTSSVKGDPTMTLSKPSLLTLKPKEERYLQVFTPNLQVFDLMKCASLGMLMFWYGSENSTSKPEKSWTDKYSSSMFTFPGTAHPGE*GLMYLPVRLGLSGTPAVKAMKFSSSEISSLIK 7109
Range 3: 6375 to 6605 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
125.2 bits(267) | 0.0 | 61/77(79%) | 0/77(0%) | Plus/Minus |
Query 507 VDKALTKLFIIITSCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSM 737 VD ALTKLFII+ CQ LKA*SIASN PEIEHLILCLFLT+N TQL* ASTSSS IIS+D+SPS A*+TSIA*LS+ Subject 6375 VDNALTKLFIILK*CQILKA*SIASNRPEIEHLILCLFLTKNLTQL*WASTSSSVIISMDSSPSRYA*ETSIA*LSI 6605
Range 4: 6376 to 7107 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
256.7 bits(554) | 0.0 | 122/244(50%) | 0/244(0%) | Plus/Minus |
Query 5 FEI*IMRSSQINCLLAKAN*HTLNIQLKWRTCNHFIKPVTMHIKTKG*KELTSIITKPARL*LHEESHPWNTDILIWVRE*HVKIRKVIHRQILIKYVYLPFYSAARRVWLDVPPREIWSVGNAGRKSYETLVFSDELSYQTTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHIMPNT*GLIYSFKQPRN*APHLVLISNQEPHTIVVCFNFLFIHHLN*QLAQPVGIGHLNCIIIN 736 FE ++R+ +I+CLLAKA *H NIQ K R N F++ VT ++KT+G K SI KP *L E N D+L+WVRE H+K K++ Q+LIKYV+ P + R+ L+VP EI +V N +SYE L+ + L Y TTFTTTR+ MN+ WK +H NT+KLK Q FN*+IHN IMPNT*GLI FK N*A HL+L+ +QE +TI++ +F HH N L+QPV IG L II+N Subject 6376 FEFRVVRNGEIHCLLAKAY*HPFNIQCKRRPHNDFVQTVTANLKTEGGKIFASIHAKPTSF*LDEMCLFRNADVLVWVREQHIKT*KILDGQVLIKYVHFPRHCTPWRIRLNVPSCEIRAVWNTCCESYEILILGN*LPY*TTFTTTRHTMNDYWKFKHTENTYKLKC*QCFN*IIHNTQIMPNT*GLINRFK*A*N*ASHLMLVPDQESNTIIMGLHFFLGHHFNG*LSQPVRIGDLYRIIVN 7107
Range 5: 6377 to 6940 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
154.1 bits(330) | 0.0 | 97/188(52%) | 0/188(0%) | Plus/Minus |
Query 172 QTCKTLTS*REPPLEH*YFDMGQRIARQNQKSHSQTDTHQVCLSSLLQRSQESMA*CTSQRDLECRERRP*KL*NSRLQ**ALLSNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*PGTAHNCSVLQLPLHSSSQLTTRPACRHRTPQLHNYQ 735 QT K LT * P E * F MG R A QN K+ +T THQVC S + E+ A*CT D C E *KL*NS + A L NYFYHYQ YE LEI*A KH QTQ T L*L+YS* S++AK+LRPN LQ KLS SS A *P HN + L SS Q PA HR P HN Q Subject 6377 QTYKFLT**NVPL*EC*CFGMGPRTAHQNLKNLGRTSTHQVCSLSPALHTLENKA*CTFL*D*GCLEHLL*KL*NSHPRKLAPLLNYFYHYQAHYE*LLEI*AH*KHLQTQMLTML*LNYS*YSNNAKYLRPNQSLQIGLKLSISSYACS*PRI*HNYNGPPLLPRSSFQWIALPAGTHRRPLSHNCQ 6940
Range 6: 7031 to 7090 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
32.2 bits(64) | 0.0 | 13/20(65%) | 0/20(0%) | Plus/Minus |
Query 22 AQQPNQLPPCQSKLAHPQHP 81 AQ+ + LPPCQS LA QHP Subject 7031 AQRRDPLPPCQSILAPLQHP 7090
Range 7: 6707 to 7054 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
76.7 bits(161) | 0.0 | 49/116(42%) | 0/116(0%) | Minus/Plus |
Query 58 KTRVS*LLRPAFPTLQISLGGTSSHTLLAAL*KGR*TYLMSICL*MTFLILTCYSLTHIKISVFQGWLSS*SQSLAGLVIMDVSSFYPLVLMCIVTGLMK*LQVLHLSWMLRVC*F 405 + R+S*L + F T IS GT S L +G+*TYLMS C F +L C S TH K S F S SQ L GL + + F P VL VT K L L WML+ C*+ Subject 6707 RMRIS*LSQQVFQTALISQEGTLSLILQGVQCRGK*TYLMSTCPSKIFQVLMCCSRTHTKTSAFLKRHISSSQKLVGLA*ILANIFPPSVLRLAVTVWTKSLWGRLLHWMLKGC*Y 7054
Range 8: 6384 to 6623 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
75.3 bits(158) | 0.0 | 41/80(51%) | 0/80(0%) | Minus/Plus |
Query 489 LCN*GVLCLQAGRVVN*DDE*RGS*STLQLCAVPG*K*AQDEVLNFWVV*SYRLGLKCLA*CDYYE*LS*SFVYV*VCGC 728 LC+ G+LC+ AGR ++*+D+ S L LC + G + A DE+LNF +*S LGLK LA +YYE* S*S V +*VC C Subject 6384 LCDRGLLCVPAGRAIH*NDDRGRSGGPL*LC*ILGQEQA*DEMLNFRPI*SD*LGLKYLALFEYYE*FS*SIVNI*VCRC 6623
Range 9: 7032 to 7091 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
30.9 bits(61) | 0.0 | 13/20(65%) | 0/20(0%) | Minus/Plus |
Query 21 GC*GCANLLWQGGS*FGCCA 80 GC* AN+LWQGGS CA Subject 7032 GC*RGANMLWQGGSGSRRCA 7091
Range 10: 6675 to 6980 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
70.3 bits(147) | 0.0 | 46/102(45%) | 0/102(0%) | Minus/Plus |
Query 132 *K*FDKRAHH*RREFHSFYGRRSRHSKSLWEVHQAILSWLRCKREDKHT**VSVCE*LF*F*RAIL*PISKYQCSKGGSLHEVKVLQVW**WMLVPSILWF* 437 *K*F+K A+ EFHSF+ R SR S +VH A+ S + E +HT**V V F F* A+L PI K+Q S G+ H+VK L VW ++ + +L F* Subject 6675 *K*FNKGANFRG*EFHSFHSRCSRQP*SHRKVH*ALFSRVCSAGESEHT**VLVRPRFFRF*CAVLGPIPKHQHS*RGTFHQVKNL*VWREYLQISFLLRF* 6980
Range 11: 6377 to 6571 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
62.5 bits(130) | 0.0 | 34/65(52%) | 0/65(0%) | Minus/Plus |
Query 541 LIIMQLRCPMPTGWASCQLR**MKRKLKHTTIVCGSWLEISTR*GAQFLGCLKL*IRP*VFGMM* 735 L IM+ R PM TGW S L+** ++K + IV SW S R* AQF LK IRP*VFG++* Subject 6377 LTIMR*RSPMRTGWESYPLK**PRKKWRPIIIVLDSWSGTSIR*DAQFQAYLKRLIRP*VFGII* 6571
Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: Hiz3
Sequence ID: AB277785.1 Length: 2876 Number of Matches: 11
Range 1: 629 to 1366 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
504.2 bits(1094) | 0.0 | 209/246(85%) | 0/246(0%) | Minus/Plus |
Query 2 CIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHDVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVNDFSDFDVLFSDPYQNISVPRVALFMKSKSCRFGNNGC*FLLSFGFDVHSDRFDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKL 739 CIDNYAIEVSYAYRLGELSIEMM EEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALS+WH + IMNNLVKALS FEFVGV+SVL+FPVV+HSVPGSGKSSLIRELI+EDE+FIAFTAGVPD+PNL+GRYIKPYSPGCAV GK+NILDEYLSV DFS FDVLFSDPYQNIS+P+ A F+KSK+CRFG N C +L SFGF V SD D+VI GSPF LDVEGVLICFGKEAVDLA AHNS+FKL Subject 629 CIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHYLSIMNNLVKALSAFEFVGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDKVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKL 1366
Range 2: 940 to 1365 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
211.4 bits(455) | 0.0 | 96/142(68%) | 0/142(0%) | Plus/Minus |
Query 3 SLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSNLSLCTSKPKDRRN*HPLLPNLQDFDFMKRATLGTLIF*YGSENSTSKSEKSFTDRYSSSMFIFPFTAQPGEYGLMYLPERFGVSGTPAVKAMKLSSSVMSSLIK 428 +L SELCA A+STASLPK ISTPSTS+ G+P +T S SL T KPK+ R PNLQ FD MK A+LG L+F YGSENSTSK EKS+TD+YSSS+F P TA PGE GLMYLP R G+SGTPAVKAMK SSS +SSLIK Subject 940 NLNSELCATARSTASLPKHISTPSTSSVKGDPTMTLSKPSLLTLKPKEERYLQVFTPNLQVFDLMKCASLGMLMFWYGSENSTSKPEKSWTDKYSSSIFTLPGTAHPGE*GLMYLPVRLGLSGTPAVKAMKFSSSEISSLIK 1365
Range 3: 631 to 858 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.4 bits(263) | 0.0 | 60/76(79%) | 0/76(0%) | Plus/Minus |
Query 510 DKALTKLFIIITSCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSM 737 D ALTKLFII+ CQ LKA*SIASN PEIEHLILCLFLT+N TQL* ASTSSS IIS+D+SPS A*+TSIA*LS+ Subject 631 DNALTKLFIILK*CQILKA*SIASNRPEIEHLILCLFLTKNLTQL*WASTSSSVIISMDSSPSRYA*ETSIA*LSI 858
Range 4: 632 to 1363 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
256.7 bits(554) | 0.0 | 122/244(50%) | 0/244(0%) | Plus/Minus |
Query 5 FEI*IMRSSQINCLLAKAN*HTLNIQLKWRTCNHFIKPVTMHIKTKG*KELTSIITKPARL*LHEESHPWNTDILIWVRE*HVKIRKVIHRQILIKYVYLPFYSAARRVWLDVPPREIWSVGNAGRKSYETLVFSDELSYQTTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHIMPNT*GLIYSFKQPRN*APHLVLISNQEPHTIVVCFNFLFIHHLN*QLAQPVGIGHLNCIIIN 736 FE ++R+S+I+CLL KA *H NI K R N FI+ VT ++KT+G K SI KPA *L E N D+L+WVRE*H+K K++ Q+LIKY++ ++ R+ L+VP EI +V N +SYE L+ ++L Y TFTTTR+ MN+ WK +H NT+KLK Q FN*+IHN IMPNT*GLI FK N*A HL+L+ +QE +TI++ +FL HH N L+QPV IG L II+N Subject 632 FEFRVVRNSEIHCLLTKAY*HPFNI*CKRRPHNDFIQTVTANLKTEGGKIFASIHAKPASF*LDEMCLFRNADVLVWVRE*HIKT*KILDGQVLIKYIHFTWHCTPWRIRLNVPSCEIRAVWNTCCESYEILILGNQLPY*ATFTTTRHTMNDYWKFKHTENTYKLKC*QCFN*IIHNTQIMPNT*GLINRFK*A*N*ASHLMLVPDQESNTIIMGLHFLLGHHFNG*LSQPVCIGDLYRIIVN 1363
Range 5: 633 to 1196 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
159.1 bits(341) | 0.0 | 98/188(52%) | 0/188(0%) | Plus/Minus |
Query 172 QTCKTLTS*REPPLEH*YFDMGQRIARQNQKSHSQTDTHQVCLSSLLQRSQESMA*CTSQRDLECRERRP*KL*NSRLQ**ALLSNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*PGTAHNCSVLQLPLHSSSQLTTRPACRHRTPQLHNYQ 735 QTCK LT * P E * F MG RIA QN K+ +T THQV L + E+ A*CT D C E *KL*NS + A L +YFYHYQ YE LEI*A KH QTQ T L*L+YS* S++AK+LRPN LQ KLS SS A *P HN + LP SS Q PA HR P HN Q Subject 633 QTCKFLT**NVPL*EC*CFGMGPRIAHQNLKNLGRTSTHQVYSLYLALHTLENKA*CTFL*D*GCLEHLL*KL*NSHPRKSAPLLSYFYHYQAHYE*LLEI*AH*KHLQTQMLTML*LNYS*YSNNAKYLRPNQSLQIGLKLSISSYACS*PRI*HNYNGPPLPPRSSFQWIALPAGMHRRPLSHNCQ 1196
Range 6: 1290 to 1346 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
25.8 bits(50) | 0.0 | 12/19(63%) | 0/19(0%) | Plus/Minus |
Query 22 AQQPNQLPPCQSKLAHPQH 78 AQQ + LPP QS LA QH Subject 1290 AQQRDPLPPYQSILAPLQH 1346
Range 7: 640 to 879 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.4 bits(167) | 0.0 | 42/80(52%) | 0/80(0%) | Minus/Plus |
Query 489 LCN*GVLCLQAGRVVN*DDE*RGS*STLQLCAVPG*K*AQDEVLNFWVV*SYRLGLKCLA*CDYYE*LS*SFVYV*VCGC 728 LC+ G+LC+ AGR ++*+D+ GS L LC + G + A DE+LNF +*S LGLK LA +YYE* S*S V +*VC C Subject 640 LCDRGLLCIPAGRAIH*NDDRGGSGGPL*LC*ILGQEQA*DEMLNFRPI*SD*LGLKYLALFEYYE*FS*SIVSI*VCRC 879
Range 8: 963 to 1310 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
69.3 bits(145) | 0.0 | 48/116(41%) | 0/116(0%) | Minus/Plus |
Query 58 KTRVS*LLRPAFPTLQISLGGTSSHTLLAAL*KGR*TYLMSICL*MTFLILTCYSLTHIKISVFQGWLSS*SQSLAGLVIMDVSSFYPLVLMCIVTGLMK*LQVLHLSWMLRVC*F 405 + R+S*L + F T IS GT S L + +* YLMS C F +L CYS TH K S F S SQ LAGL + + F P VL VT +K L L ML+ C*+ Subject 963 RMRIS*LSQQVFQTALISQEGTLSLILQGVQCQVK*IYLMSTCPSKIFQVLMCYSRTHTKTSAFLKRHISSSQKLAGLA*ILANIFPPSVLRLAVTVWIKSLWGRLLH*MLKGC*Y 1310
Range 9: 1291 to 1347 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
29.5 bits(58) | 0.0 | 12/19(63%) | 0/19(0%) | Minus/Plus |
Query 21 C*GCANLLWQGGS*FGCCA 77 C* AN+LW GGS CCA Subject 1291 C*RGANMLW*GGSGSRCCA 1347
Range 10: 931 to 1236 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
67.5 bits(141) | 0.0 | 46/102(45%) | 0/102(0%) | Minus/Plus |
Query 132 *K*FDKRAHH*RREFHSFYGRRSRHSKSLWEVHQAILSWLRCKREDKHT**VSVCE*LF*F*RAIL*PISKYQCSKGGSLHEVKVLQVW**WMLVPSILWF* 437 *K* +K A EFHSF+ R SR S +VH A+ S + R ++T**V V F F* AIL PI K+Q S G+ H+VK LQVW ++ + +L F* Subject 931 *K*LNKGADFRG*EFHSFHSRCSRQP*SHRKVH*ALFSRVCSAR*SEYT**VLVRPRFFRF*CAILGPIPKHQHS*RGTFHQVKNLQVWREYLQISFLLRF* 1236
Range 11: 633 to 827 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
63.8 bits(133) | 0.0 | 35/65(54%) | 0/65(0%) | Minus/Plus |
Query 541 LIIMQLRCPMPTGWASCQLR**MKRKLKHTTIVCGSWLEISTR*GAQFLGCLKL*IRP*VFGMM* 735 L IM+ R PM TGW S L+** +RK + IV SW S R* AQF LK IRP*VFG++* Subject 633 LTIMR*RSPMHTGWESYPLK**PRRKWRPIIIVLDSWSGTSIR*DAQFQAYLKRLIRP*VFGII* 827
Nucleotide Sequence (373 letters)
Query ID: | ds2016-133_14 |
Query definition: | No definition line |
Query length: | 603 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
298.9 | 1536.8 | 34% | 1.889e-79 | 92% | AY368590.1 | |
292.0 | 1416.8 | 34% | 2.215e-77 | 83% | KX274275.1 | |
267.3 | 890.1 | 39% | 6.13e-70 | 49% | HE591388.1 | |
267.3 | 923.4 | 39% | 6.13e-70 | 51% | JQ922417.1 | |
267.3 | 927.6 | 39% | 6.13e-70 | 51% | KX925555.1 |
Alignments
Rupestris stem pitting associated virus strain Syrah, complete genome
Sequence ID: AY368590.1 Length: 8742 Number of Matches: 6
Range 1: 2533 to 2892 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
298.9 bits(646) | 0.0 | 118/120(98%) | 0/120(0%) | Plus/Plus |
Query 8 VTKTRNPVEGNHCSLTIEPSEFFEMPRGMQSNFFHGVSNCLSGRVSLTFRRQKLEDDDQIFVSPQVPIEQNHEKLDRNMWQMGLHGIKKSISINGTSFTSDLCSCYSCHNFHKFKDLINN 367 V+KTRNPVEGNHCSLTIEPSEFFEMPRGMQSNFFHGVSNCLSGRVSLTFRRQKLEDDDQIFVSPQVPIEQNHEKLDRNMWQMGLHGIKKSISINGTSFTSDLCSC+SCHNFHKFKDLINN Subject 2533 VSKTRNPVEGNHCSLTIEPSEFFEMPRGMQSNFFHGVSNCLSGRVSLTFRRQKLEDDDQIFVSPQVPIEQNHEKLDRNMWQMGLHGIKKSISINGTSFTSDLCSCFSCHNFHKFKDLINN 2892
Range 2: 2533 to 2892 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
260.4 bits(562) | 0.0 | 111/120(92%) | 0/120(0%) | Minus/Minus |
Query 8 IVYQILEFVKVMTRIARTKV*CKACAID*NGFLDSMKAHLPHVSIKLLMILLNGHLRANKNLVIIFQFLASECQRHSPTQTIGNAMEKVALHTSRHLKKLARFNCQAAVVSFNWISSLSN 367 IVYQILEFVKVMTR ARTKV*CKACAID*NGFLD M+ HLPHVSIKLLMILLN HLRANKNLV+IFQFLASECQR+SPTQTIGNAMEKVALHTSRHLK+LARFNCQAAVVSFNWISSL+N Subject 2533 IVYQILEFVKVMTRKARTKV*CKACAID*NGFLDPMETHLPHVSIKLLMILLNWHLRANKNLVVIFQFLASECQRYSPTQTIGNAMEKVALHTSRHLKELARFNCQAAVVSFNWISSLTN 2892
Range 3: 2531 to 2893 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
260.0 bits(561) | 0.0 | 111/121(92%) | 0/121(0%) | Minus/Minus |
Query 6 DCLSDP*ICESYDKNSKNKGLM*SLCH*LKWIS*FHEGPSATCFDQASHDFAQWALEG*QKFGHHLPVFGVGMSKTLSHSDNWKRHGKSCSAYLEASQKTR*VQLSGCSGFLQLDF*S**L 368 DCLSDP*ICESYDK SKNKGLM*SLCH*LKWIS* H PSATCFDQASHDFAQ ALEG*QKFG HLPVFGVGMSK LSHS+NWKRHGKSCSAYLEASQ+TR*VQLSGCSGFLQLDF*S *L Subject 2531 DCLSDP*ICESYDKKSKNKGLM*SLCH*LKWIS*SHGDPSATCFDQASHDFAQLALEG*QKFGRHLPVFGVGMSKILSHSNNWKRHGKSCSAYLEASQRTR*VQLSGCSGFLQLDF*SY*L 2893
Range 4: 2534 to 2893 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
246.2 bits(531) | 0.0 | 111/120(92%) | 0/120(0%) | Plus/Plus |
Query 9 LLRLEIQLKETTAA*QLNLASFLRCLEVCRATFSMAFPIV*VGECL*HSDAKNWKMMTKFLLALKCPLSKIMRSLIETCGRWAFMESRNPFQSMAQALHQTFVLAILVITFTNSRI**TI 368 L+RLEIQLKETTAA*QLNLAS LRCLEVCRATFSMAFPIV*VGE L*HSDAKNWKM TKFLLALKC LSKIMRSLIETCGRW M SRNPFQSMAQALHQTFVLA LVITFTNSRI**TI Subject 2534 LVRLEIQLKETTAA*QLNLASSLRCLEVCRATFSMAFPIV*VGEYL*HSDAKNWKMTTKFLLALKCQLSKIMRSLIETCGRWVSMGSRNPFQSMAQALHQTFVLAFLVITFTNSRI**TI 2893
Range 5: 2532 to 2897 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
242.1 bits(522) | 0.0 | 116/122(95%) | 0/122(0%) | Minus/Minus |
Query 7 LGLFIRSLNL*KL*QE*QEQRSDVKLVPLIEMDFLIP*RPICHMXXXXXXXXXSMGT*GLTKIWSSSSSFWRRNVKDTLPLRQLETPWKKLLCIPRGISKNSLGSIVRLQWFPSTGFLVLVT 372 L LFIRSLNL*KL*QE QEQRSDVKLVPLIEMDFLIP RPICHMFRSSFS*FCS+GT*GLTKIWSSSSSFWRRNVKDTLPL+QLETPWKKLLCIPRGISKNSLGSIVRLQWFPSTGFLVL+T Subject 2532 LRLFIRSLNL*KL*QEKQEQRSDVKLVPLIEMDFLIPWRPICHMFRSSFS*FCSIGT*GLTKIWSSSSSFWRRNVKDTLPLKQLETPWKKLLCIPRGISKNSLGSIVRLQWFPSTGFLVLLT 2897
Range 6: 2538 to 2897 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
229.3 bits(494) | 0.0 | 111/120(92%) | 0/120(0%) | Plus/Plus |
Query 13 *D*KSS*RKPLQPDN*T*RVF*DASRYAEQLFPWRFQLSEWESVFDIPTPKTGR**PNFC*PSSAH*AKS*EA*SKHVADGPSWNQEIHFNQWHKLYIRPXXXXXXXXXXQIQGSDKQSK 372 *D*KSS*RKPLQPDN*T*RV *DASRYAEQLFPWRFQL EWES+FDIPTPKTGR* PNFC*PSSA+*AKS*EA*SKHVADG W+QEIHFNQWHKLYIRPLFLLFLS*LSQIQGSDKQS+ Subject 2538 *D*KSS*RKPLQPDN*T*RVL*DASRYAEQLFPWRFQLFEWESIFDIPTPKTGR*RPNFC*PSSAN*AKS*EA*SKHVADGSPWDQEIHFNQWHKLYIRPLFLLFLS*LSQIQGSDKQSQ 2897
Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome
Sequence ID: KX274275.1 Length: 8724 Number of Matches: 6
Range 1: 2533 to 2892 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
292.0 bits(631) | 0.0 | 115/120(96%) | 0/120(0%) | Plus/Plus |
Query 8 VTKTRNPVEGNHCSLTIEPSEFFEMPRGMQSNFFHGVSNCLSGRVSLTFRRQKLEDDDQIFVSPQVPIEQNHEKLDRNMWQMGLHGIKKSISINGTSFTSDLCSCYSCHNFHKFKDLINN 367 V+KTRN VEGNHCSLTIEP EFFEMPRGMQSNFFHGVSNCLSGRVSLTFRRQKLEDDDQIF+SPQVPIEQNHEKLDRNMWQMGLHGIKKSISINGTSFTSDLCSC+SCHNFHKFKDLINN Subject 2533 VSKTRNLVEGNHCSLTIEPGEFFEMPRGMQSNFFHGVSNCLSGRVSLTFRRQKLEDDDQIFISPQVPIEQNHEKLDRNMWQMGLHGIKKSISINGTSFTSDLCSCFSCHNFHKFKDLINN 2892
Range 2: 2531 to 2893 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
239.3 bits(516) | 0.0 | 102/121(84%) | 0/121(0%) | Minus/Minus |
Query 6 DCLSDP*ICESYDKNSKNKGLM*SLCH*LKWIS*FHEGPSATCFDQASHDFAQWALEG*QKFGHHLPVFGVGMSKTLSHSDNWKRHGKSCSAYLEASQKTR*VQLSGCSGFLQLDF*S**L 368 DCLSDP* CESYDK SKNKGLM*SLCH*LKWIS* H GP ATC DQASHDFAQWAL G* KFG HL +FGVGMSKTLSHS NWK HGK+CSAY EASQ+TR VQLSGC+GFLQLDF*S *L Subject 2531 DCLSDP*TCESYDKKSKNKGLM*SLCH*LKWIS*SHGGPFATCCDQASHDFAQWALGG**KFGRHLLIFGVGMSKTLSHSGNWKHHGKNCSAYPEASQRTRQVQLSGCNGFLQLDF*SY*L 2893
Range 3: 2533 to 2892 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
236.1 bits(509) | 0.0 | 101/120(84%) | 0/120(0%) | Minus/Minus |
Query 8 IVYQILEFVKVMTRIARTKV*CKACAID*NGFLDSMKAHLPHVSIKLLMILLNGHLRANKNLVIIFQFLASECQRHSPTQTIGNAMEKVALHTSRHLKKLARFNCQAAVVSFNWISSLSN 367 IVYQILE VKVMTR ARTKV*C+ACAI+*NGFLD M+AHLPHV+IKLLMILLNGHL AN+NLV+IF FLASECQRHSPTQ IGN MEK+ALHT RHLK+LARFNCQAA+VSFN ISSL+N Subject 2533 IVYQILELVKVMTRKARTKV*CEACAIN*NGFLDPMEAHLPHVAIKLLMILLNGHLGANENLVVIF*FLASECQRHSPTQAIGNTMEKIALHTPRHLKELARFNCQAAMVSFN*ISSLTN 2892
Range 4: 2532 to 2897 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
232.0 bits(500) | 0.0 | 112/122(92%) | 0/122(0%) | Minus/Minus |
Query 7 LGLFIRSLNL*KL*QE*QEQRSDVKLVPLIEMDFLIP*RPICHMXXXXXXXXXSMGT*GLTKIWSSSSSFWRRNVKDTLPLRQLETPWKKLLCIPRGISKNSLGSIVRLQWFPSTGFLVLVT 372 L LFIRSLNL*KL*QE QEQRSDVKLVPLIEMDFLIP RPICHM RSSFS*FCSMGT GL KIWSSSS+FWRRNVKDTLPLRQLETPWKKLLCIPRGISKNS GSIVRLQWFPST FLVL+T Subject 2532 LRLFIRSLNL*KL*QEKQEQRSDVKLVPLIEMDFLIPWRPICHMLRSSFS*FCSMGTWGLMKIWSSSSNFWRRNVKDTLPLRQLETPWKKLLCIPRGISKNSPGSIVRLQWFPSTRFLVLLT 2897
Range 5: 2531 to 2893 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
216.4 bits(466) | 0.0 | 100/121(83%) | 0/121(0%) | Plus/Plus |
Query 6 ELLRLEIQLKETTAA*QLNLASFLRCLEVCRATFSMAFPIV*VGECL*HSDAKNWKMMTKFLLALKCPLSKIMRSLIETCGRWAFMESRNPFQSMAQALHQTFVLAILVITFTNSRI**TI 368 +L+RLEI LKET AA*QLNLAS LRCL VCRA FSM FPI *VGECL*HSDAKN KM TKF LA KCPLSKIMRSLI TCG+WA M SRNPFQ MAQA HQTFVLA LVITFT+SRI**TI Subject 2531 QLVRLEI*LKETIAA*QLNLASSLRCLGVCRAIFSMVFPIA*VGECL*HSDAKN*KMTTKFSLAPKCPLSKIMRSLIATCGKWASMGSRNPFQLMAQASHQTFVLAFLVITFTSSRI**TI 2893
Range 6: 2538 to 2897 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
200.8 bits(432) | 0.0 | 101/120(84%) | 0/120(0%) | Plus/Plus |
Query 13 *D*KSS*RKPLQPDN*T*RVF*DASRYAEQLFPWRFQLSEWESVFDIPTPKTGR**PNFC*PSSAH*AKS*EA*SKHVADGPSWNQEIHFNQWHKLYIRPXXXXXXXXXXQIQGSDKQSK 372 *D*KSS*RKPLQPDN*T RV *DAS YAEQ FPW FQL EWESVFDIPTPK R* PNF *P SAH*AKS*EA*S+HVA+GP W+QEIHFN WHKL+IRPLFLLFLS*LSQ+QGSDKQS+ Subject 2538 *D*KSS*RKPLQPDN*TWRVL*DASGYAEQFFPWCFQLPEWESVFDIPTPKIRR*RPNFH*PPSAH*AKS*EA*SQHVANGPPWDQEIHFN*WHKLHIRPLFLLFLS*LSQVQGSDKQSQ 2897
Grapevine rupestris stem pitting associated virus complete genome, isolate PG, genomic RNA
Sequence ID: HE591388.1 Length: 8725 Number of Matches: 8
Range 1: 2533 to 2892 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
267.3 bits(577) | 0.0 | 103/120(86%) | 0/120(0%) | Plus/Plus |
Query 8 VTKTRNPVEGNHCSLTIEPSEFFEMPRGMQSNFFHGVSNCLSGRVSLTFRRQKLEDDDQIFVSPQVPIEQNHEKLDRNMWQMGLHGIKKSISINGTSFTSDLCSCYSCHNFHKFKDLINN 367 ++K+RN VEGNHCSLTI P+EFFEMPRGMQ N+FHGVSNC GRVSLTFRRQKLEDDD IF++PQVPIE NHEKLDR+MWQMGLHGIKKSIS+NGTSFTSDLCSC+SCHNFHKFKDLINN Subject 2533 ISKSRNLVEGNHCSLTIGPNEFFEMPRGMQCNYFHGVSNCTPGRVSLTFRRQKLEDDDLIFINPQVPIELNHEKLDRSMWQMGLHGIKKSISMNGTSFTSDLCSCFSCHNFHKFKDLINN 2892
Range 2: 2547 to 2897 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
155.0 bits(332) | 0.0 | 83/117(71%) | 0/117(0%) | Minus/Minus |
Query 22 LGLFIRSLNL*KL*QE*QEQRSDVKLVPLIEMDFLIP*RPICHMXXXXXXXXXSMGT*GLTKIWSSSSSFWRRNVKDTLPLRQLETPWKKLLCIPRGISKNSLGSIVRLQWFPSTGF 372 L L +RSLNL*KL QE QE RS+VKLVP IE+DFLIP*RPICH+ RSSFS* SMGT G KI SSSS+F R V+DT P QLETPWK L C+P GISKNS G IVRLQ PST F Subject 2547 LKLLMRSLNL*KLWQEKQEHRSEVKLVPFIEIDFLIP*RPICHILRSSFS*LSSMGTCGFMKIKSSSSNF*RLKVRDTRPGVQLETPWK*LHCMPLGISKNSFGPIVRLQ*LPSTKF 2897
Range 3: 2530 to 2892 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
134.4 bits(287) | 0.0 | 64/121(53%) | 0/121(0%) | Minus/Minus |
Query 5 IVYQILEFVKVMTRIARTKV*CKACAID*NGFLDSMKAHLPHVSIKLLMILLNGHLRANKNLVIIFQFLASECQRHSPTQTIGNAMEKVALHTSRHLKKLARFNCQAAVVSFNWISSLSNS 367 +V +ILEF+KV+ R AR V* + AI N FL+SMK HLPH S+KL MI LNGHL ++ +IIFQ L + + P +TIGN ME V LH RH +KL NCQAA+++ N IS L+NS Subject 2530 VVDEILEFMKVVAREARA*V*GETRAIHRNRFLNSMKTHLPHTSVKLFMIELNGHLWIYEDQIIIFQLLTPKG*GYPPWRTIGNPMEVVTLHAPRHFEKLIWPNCQAAMITLNQISRLTNS 2892
Range 4: 2726 to 2881 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
75.8 bits(159) | 0.0 | 32/52(62%) | 0/52(0%) | Plus/Plus |
Query 201 KCPLSKIMRSLIETCGRWAFMESRNPFQSMAQALHQTFVLAILVITFTNSRI 356 +CPLS IM+SL E CGRW FME RN F MA+ QT+ LA L TF NSRI Subject 2726 RCPLSSIMKSLTEVCGRWVFMELRNLFL*MARVSPQTYALASLATTFINSRI 2881
Range 5: 2534 to 2704 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.3 bits(110) | 0.0 | 28/57(49%) | 0/57(0%) | Plus/Plus |
Query 9 LLRLEIQLKETTAA*QLNLASFLRCLEVCRATFSMAFPIV*VGECL*HSDAKNWKMM 179 L+ EI L+ AA*QL SF +CL C T SM FPIV G * K+WKMM Subject 2534 LVSREIWLRVIIAA*QLGQMSFSKCLGACNVTTSMGFPIVRQGGYP*PLGVKSWKMM 2704
Range 6: 2687 to 2890 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
78.0 bits(164) | 0.0 | 40/68(59%) | 0/68(0%) | Minus/Minus |
Query 162 CLSDP*ICESYDKNSKNKGLM*SLCH*LKWIS*FHEGPSATCFDQASHDFAQWALEG*QKFGHHLPVF 365 C DP*I ES K SK+ GL *+ CH K IS*FHE PSAT F QA HD AQWA + HHLP F Subject 2687 C**DP*IYESCGKRSKSIGLR*NSCHS*K*IS*FHEDPSATYFGQAFHD*AQWAPVDL*RSNHHLPTF 2890
Range 7: 2546 to 2650 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
37.3 bits(75) | 0.0 | 17/35(49%) | 0/35(0%) | Minus/Minus |
Query 21 NWKRHGKSCSAYLEASQKTR*VQLSGCSGFLQLDF 125 NWK HG S A A +KT QLSGC+ + Q +F Subject 2546 NWKPHGSSYIACP*AFRKTHLAQLSGCNDYPQPNF 2650
Range 8: 2568 to 2891 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
89.0 bits(188) | 0.0 | 53/108(49%) | 0/108(0%) | Plus/Plus |
Query 43 LQPDN*T*RVF*DASRYAEQLFPWRFQLSEWESVFDIPTPKTGR**PNFC*PSSAH*AKS*EA*SKHVADGPSWNQEIHFNQWHKLYIRPXXXXXXXXXXQIQGSDKQ 366 LQPDN VF +A +A L PW FQL + ++ K GR** + + AH*A+S*+A* K+VADG SWN EI+F +WH+ ++RP+ LL L LS IQGS +Q Subject 2568 LQPDNWAK*VFRNA*GHAM*LLPWGFQLYARAGIPNL*ASKVGR**FDLHKSTGAH*AQS*KA*PKYVADGSSWN*EIYFYEWHEFHLRPMLLLLLPQLS*IQGSHQQ 2891
Grapevine rupestris stem pitting associated virus isolate GRSPaV GG, complete genome
Sequence ID: JQ922417.1 Length: 8758 Number of Matches: 7
Range 1: 2533 to 2892 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
267.3 bits(577) | 0.0 | 103/120(86%) | 0/120(0%) | Plus/Plus |
Query 8 VTKTRNPVEGNHCSLTIEPSEFFEMPRGMQSNFFHGVSNCLSGRVSLTFRRQKLEDDDQIFVSPQVPIEQNHEKLDRNMWQMGLHGIKKSISINGTSFTSDLCSCYSCHNFHKFKDLINN 367 ++K+RN VEGNHCSLTI P+EFFEMPRGMQ N+FHGVSNC GRVSLTFRRQKLEDDD IF++PQVPIE NHEKLDR+MWQMGLHGIKKSIS+NGTSFTSDLCSC+SCHNFHKFKDLINN Subject 2533 ISKSRNLVEGNHCSLTIGPNEFFEMPRGMQCNYFHGVSNCTPGRVSLTFRRQKLEDDDLIFINPQVPIELNHEKLDRSMWQMGLHGIKKSISMNGTSFTSDLCSCFSCHNFHKFKDLINN 2892
Range 2: 2547 to 2897 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
161.9 bits(347) | 0.0 | 84/117(72%) | 0/117(0%) | Minus/Minus |
Query 22 LGLFIRSLNL*KL*QE*QEQRSDVKLVPLIEMDFLIP*RPICHMXXXXXXXXXSMGT*GLTKIWSSSSSFWRRNVKDTLPLRQLETPWKKLLCIPRGISKNSLGSIVRLQWFPSTGF 372 L L +RSLNL*KL QE QE RS+VKLVP IE+DFLIP*RPICH+ RSSFS* SMGT G KI SSSS+FWR V+DT P QLETPWK L C+P GISKNS G IVRLQ PST F Subject 2547 LKLLMRSLNL*KLWQEKQEHRSEVKLVPFIEIDFLIP*RPICHILRSSFS*LSSMGTCGFMKIKSSSSNFWRLKVRDTRPGVQLETPWK*LHCMPLGISKNSFGPIVRLQ*LPSTKF 2897
Range 3: 2530 to 2892 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.5 bits(309) | 0.0 | 67/121(55%) | 0/121(0%) | Minus/Minus |
Query 5 IVYQILEFVKVMTRIARTKV*CKACAID*NGFLDSMKAHLPHVSIKLLMILLNGHLRANKNLVIIFQFLASECQRHSPTQTIGNAMEKVALHTSRHLKKLARFNCQAAVVSFNWISSLSNS 367 +V +ILEF+KV+ R R V* + AI N FL+SMK HLPH S+KL MI LNGHL ++ +IIFQFLA + Q + P +TIGN ME +ALH RH KKL NCQAA+++ N IS L+NS Subject 2530 VVDEILEFMKVVARETRA*V*GETRAIHRNRFLNSMKTHLPHTSVKLFMIELNGHLWIYEDQIIIFQFLAPKGQGYPPWRTIGNPMEVIALHAPRHFKKLIWPNCQAAMITLNQISRLTNS 2892
Range 4: 2546 to 2890 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
115.6 bits(246) | 0.0 | 59/115(51%) | 0/115(0%) | Minus/Minus |
Query 21 CLSDP*ICESYDKNSKNKGLM*SLCH*LKWIS*FHEGPSATCFDQASHDFAQWALEG*QKFGHHLPVFGVGMSKTLSHSDNWKRHGKSCSAYLEASQKTR*VQLSGCSGFLQLDF 365 C DP*I ES K +K+ GL *+ CH K IS*FHE PSAT F QA HD AQWA + HHLP+FG S + + NWK HG +C A A QKT QLSGC+ + Q +F Subject 2546 C**DP*IYESCGKRNKSIGLR*NSCHS*K*IS*FHEDPSATYFGQAFHD*AQWAPVDL*RSNHHLPIFGA*RSGIPALAYNWKPHGSNCIACP*AFQKTHLAQLSGCNDYPQPNF 2890
Range 5: 2726 to 2881 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
73.9 bits(155) | 0.0 | 31/52(60%) | 0/52(0%) | Plus/Plus |
Query 201 KCPLSKIMRSLIETCGRWAFMESRNPFQSMAQALHQTFVLAILVITFTNSRI 356 +CPLS IM+SL E CGRW FME RN F MA+ QT+ L L TF NSRI Subject 2726 RCPLSSIMKSLTEVCGRWVFMELRNLFL*MARVSPQTYALVSLATTFINSRI 2881
Range 6: 2534 to 2704 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
59.3 bits(123) | 0.0 | 31/57(54%) | 0/57(0%) | Plus/Plus |
Query 9 LLRLEIQLKETTAA*QLNLASFLRCLEVCRATFSMAFPIV*VGECL*HSDAKNWKMM 179 L+ EI L+ AA*QL SFL+CL C A SM FPIV G * AKNWKMM Subject 2534 LVSREIWLRVIIAA*QLGQMSFLKCLGACNAITSMGFPIVRQGGYP*PLGAKNWKMM 2704
Range 7: 2568 to 2891 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.0 bits(214) | 0.0 | 56/108(52%) | 0/108(0%) | Plus/Plus |
Query 43 LQPDN*T*RVF*DASRYAEQLFPWRFQLSEWESVFDIPTPKTGR**PNFC*PSSAH*AKS*EA*SKHVADGPSWNQEIHFNQWHKLYIRPXXXXXXXXXXQIQGSDKQ 366 LQPDN VF*+A +A QL PW FQL + D+ PK GR** + + AH*A+S*+A* K+VADG SWN EI+F +WH+ ++RP+ L L LS IQGS +Q Subject 2568 LQPDNWAK*VF*NA*GHAMQLLPWGFQLYARAGIPDL*APKIGR**FDLHKSTGAH*AQS*KA*PKYVADGSSWN*EIYFYEWHEFHLRPMLLFLLPQLS*IQGSHQQ 2891
Grapevine rupestris stem pitting associated virus isolate ISA BR replicase, 24.4 kDa protein, 12.8 kDa protein, 8.4 kDa protein, and 28 kDa protein genes, complete cds
Sequence ID: KX925555.1 Length: 8659 Number of Matches: 7
Range 1: 2517 to 2876 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
267.3 bits(577) | 0.0 | 103/120(86%) | 0/120(0%) | Plus/Plus |
Query 8 VTKTRNPVEGNHCSLTIEPSEFFEMPRGMQSNFFHGVSNCLSGRVSLTFRRQKLEDDDQIFVSPQVPIEQNHEKLDRNMWQMGLHGIKKSISINGTSFTSDLCSCYSCHNFHKFKDLINN 367 ++K+RN VEGNHCSLTI P+EFFEMPRGMQ N+FHGVSNC GRVSLTFRRQKLEDDD IF++PQVPIE NHEKLDR+MWQMGLHGIKKSIS+NGTSFTSDLCSC+SCHNFHKFKDLINN Subject 2517 ISKSRNLVEGNHCSLTIGPNEFFEMPRGMQCNYFHGVSNCTPGRVSLTFRRQKLEDDDLIFINPQVPIELNHEKLDRSMWQMGLHGIKKSISMNGTSFTSDLCSCFSCHNFHKFKDLINN 2876
Range 2: 2531 to 2881 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
163.3 bits(350) | 0.0 | 85/117(73%) | 0/117(0%) | Minus/Minus |
Query 22 LGLFIRSLNL*KL*QE*QEQRSDVKLVPLIEMDFLIP*RPICHMXXXXXXXXXSMGT*GLTKIWSSSSSFWRRNVKDTLPLRQLETPWKKLLCIPRGISKNSLGSIVRLQWFPSTGF 372 L L +RSLNL*KL QE QE RS+VKLVP IE+DFLIP*RPICH+ RSSFS* SMGT G KI SSSS+FWR VKDT P QLETPWK L C+P GISKNS G IVRLQ PST F Subject 2531 LKLLMRSLNL*KLWQEKQEHRSEVKLVPFIEIDFLIP*RPICHILRSSFS*LSSMGTCGFMKIKSSSSNFWRLKVKDTRPGVQLETPWK*LHCMPLGISKNSFGPIVRLQ*LPSTKF 2881
Range 3: 2514 to 2876 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
142.2 bits(304) | 0.0 | 67/121(55%) | 0/121(0%) | Minus/Minus |
Query 5 IVYQILEFVKVMTRIARTKV*CKACAID*NGFLDSMKAHLPHVSIKLLMILLNGHLRANKNLVIIFQFLASECQRHSPTQTIGNAMEKVALHTSRHLKKLARFNCQAAVVSFNWISSLSNS 367 +V +ILEF+KV+ R R V* K AI N FL+SMK HLPH S+KL MI LNGHL ++ +IIFQ LA + Q + P +TIGN ME +ALH RH KKL NCQAA+++ N IS L+NS Subject 2514 VVDEILEFMKVVARETRA*V*GKTRAIHRNRFLNSMKTHLPHTSVKLFMIELNGHLWIYEDQIIIFQLLAPKGQGYPPWRTIGNPMEVIALHAPRHFKKLIWPNCQAAMITLNQIS*LTNS 2876
Range 4: 2530 to 2874 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
116.1 bits(247) | 0.0 | 59/115(51%) | 0/115(0%) | Minus/Minus |
Query 21 CLSDP*ICESYDKNSKNKGLM*SLCH*LKWIS*FHEGPSATCFDQASHDFAQWALEG*QKFGHHLPVFGVGMSKTLSHSDNWKRHGKSCSAYLEASQKTR*VQLSGCSGFLQLDF 365 C DP*I ES K +K+ GL *+ CH K IS*FHE PSAT F QA HD AQWA + HHLP FG S+ + + NWK HG +C A A QKT QLSGC+ + Q +F Subject 2530 C**DP*IYESCGKRNKSIGLR*NSCHS*K*IS*FHEDPSATYFGQAFHD*AQWAPVDL*RSNHHLPTFGA*RSRIPALAYNWKPHGSNCIACP*AFQKTHLAQLSGCNDYPQPNF 2874
Range 5: 2710 to 2865 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
76.7 bits(161) | 0.0 | 32/52(62%) | 0/52(0%) | Plus/Plus |
Query 201 KCPLSKIMRSLIETCGRWAFMESRNPFQSMAQALHQTFVLAILVITFTNSRI 356 +CPLS IM+SL E CGRW FME RN F MA+ L QT+ L L TF NSRI Subject 2710 RCPLSSIMKSLTEVCGRWVFMELRNLFL*MARVLPQTYALVSLATTFINSRI 2865
Range 6: 2518 to 2688 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
56.5 bits(117) | 0.0 | 30/57(53%) | 0/57(0%) | Plus/Plus |
Query 9 LLRLEIQLKETTAA*QLNLASFLRCLEVCRATFSMAFPIV*VGECL*HSDAKNWKMM 179 L+ EI L+ AA*QL SFL+CL C A SM FPIV G * AK+WKMM Subject 2518 LVSHEIWLRVIIAA*QLGQMSFLKCLGACNAITSMGFPIVRQGGYP*PLGAKSWKMM 2688
Range 7: 2552 to 2875 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
105.5 bits(224) | 0.0 | 57/108(53%) | 0/108(0%) | Plus/Plus |
Query 43 LQPDN*T*RVF*DASRYAEQLFPWRFQLSEWESVFDIPTPKTGR**PNFC*PSSAH*AKS*EA*SKHVADGPSWNQEIHFNQWHKLYIRPXXXXXXXXXXQIQGSDKQ 366 LQPDN VF*+A +A QL PW FQL + D+ PK GR** + + AH*A+S*+A* K+VADG SWN EI+F +WH+ Y+RP+ L L LS IQGS +Q Subject 2552 LQPDNWAK*VF*NA*GHAMQLLPWGFQLYARAGILDL*APKVGR**FDLHKSTGAH*AQS*KA*PKYVADGSSWN*EIYFYEWHEFYLRPMLLFLLPQLS*IQGSHQQ 2875
Nucleotide Sequence (426 letters)
Query ID: | ds2016-133_14 |
Query definition: | No definition line |
Query length: | 603 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
285.6 | 1535.3 | 29% | 2.344e-75 | 86% | KX274274.1 | |
252.2 | 1428.5 | 29% | 2.749e-65 | 83% | KT948710.1 | |
274.2 | 1436.8 | 25% | 6.506e-72 | 91% | DQ364981.1 | |
270.5 | 1426.2 | 25% | 8.256e-71 | 87% | DQ364979.1 | |
268.2 | 1399.7 | 25% | 4.041e-70 | 89% | DQ364989.1 |
Alignments
Grapevine rupestris stem pitting associated virus isolate SK704 A, complete genome
Sequence ID: KX274274.1 Length: 8725 Number of Matches: 8
Range 1: 7673 to 8095 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
285.6 bits(617) | 0.0 | 126/141(89%) | 0/141(0%) | Minus/Plus |
Query 2 PCIH*EGSVGRVEGFRG*PKG**N*LQLLKELNGKSSRKVAWRV**SI*SQA*GFRVSKGSKSSGSFQPASHS*WHSCQKEKSY*ECTLEDSGYA*SFKA*ICCTLPKCNG*GSNR*ADSCFWRVGHIRE*SI*RCNRYCT 424 P H VGR EGFRG*PKG**N*LQLLKELNGKSSRKVAWRV**SI*SQA*GFRVSKGSKSSGSFQPASHS*WHSCQKEKSY*ECTLEDSGYA*SFKA*ICCTLPKCNG*GSNR*ADSCFWRVGH R+ ++* CNR+C+ Subject 7673 PSCHS*RGVGRSEGFRG*PKG**N*LQLLKELNGKSSRKVAWRV**SI*SQA*GFRVSKGSKSSGSFQPASHS*WHSCQKEKSY*ECTLEDSGYA*SFKA*ICCTLPKCNG*GSNR*ADSCFWRVGHSRKCAV*CCNRHCS 8095
Range 2: 7734 to 8090 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
273.2 bits(590) | 0.0 | 111/119(93%) | 0/119(0%) | Plus/Minus |
Query 7 NIYCNVKLITL*YARLSKSTNQLIYCSLIHYIWGEYNRFMP*NFTHIHCLRECILNNSFPFGKNATKNGRLVGNFRSFLSPC*L*SLKPGFICFIRLARQLSDLTCHLTLSTTVINFIN 363 N+YCN+KL YARLSKSTNQLIYCSLIHYIWGEYNRFMP*NFTHIHCLRECILNNSFPFGKNATK+GRLVGNFRSFLSPC*L*SLKPGFICFIRLARQLS LTCHLTLSTTVINFIN Subject 7734 NVYCNIKLHIFGYARLSKSTNQLIYCSLIHYIWGEYNRFMP*NFTHIHCLRECILNNSFPFGKNATKSGRLVGNFRSFLSPC*L*SLKPGFICFIRLARQLSYLTCHLTLSTTVINFIN 8090
Range 3: 7681 to 8091 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
262.2 bits(566) | 0.0 | 120/137(88%) | 0/137(0%) | Minus/Plus |
Query 6 PLRRKCREG*RL*GLAKRLMKLITVVERVKWQVKSESCLASLMKHMKPGLRL*S*QGLKKLRKFPTSLPFLVAFLPKGKELLRMHSRRQWICVKF*GMNLLYSPQM*WMREQ*MS*FVLLESRAYQRVINLTLQ*IL 416 P ++C *RL*GLAKRLMKLITVVERVKWQVK ESCLASLMKHMKPGLRL*S*QGLKKLRKFPTSLP LVAFLPKGKELLRMHSRRQWICVKF*GMNLLYSPQM*WMREQ*MS*FVLLESRA ++ +L LQ* L Subject 7681 PQLKRCWAV*RL*GLAKRLMKLITVVERVKWQVK*ESCLASLMKHMKPGLRL*S*QGLKKLRKFPTSLPLLVAFLPKGKELLRMHSRRQWICVKF*GMNLLYSPQM*WMREQ*MS*FVLLESRA*PKMCSLMLQ*TL 8091
Range 4: 7726 to 8091 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
250.3 bits(540) | 0.0 | 113/122(93%) | 0/122(0%) | Plus/Minus |
Query 6 QYLLQR*IDHSLICPTLQKHESAXXXXXXXXXXGRVQQIHALKLHAYPLSSRVHSQ*LFSFWQECH*EWEAGWKLPELFEPLLTLKP*AWLHMLH*TRQATFRLDLPFNSFNNCNQFHQPFG 371 Q LLQ H +CPTLQKHESAHLLLPHPLHLGRVQQIHALKLHAYPLSSRVHSQ*LFSFWQECH*EWEAGWKLPELFEPLLTLKP*AWLHMLH*TRQATF LDLPFNSFNNCNQFHQPFG Subject 7726 QCLLQHQTAHFRLCPTLQKHESAHLLLPHPLHLGRVQQIHALKLHAYPLSSRVHSQ*LFSFWQECH*EWEAGWKLPELFEPLLTLKP*AWLHMLH*TRQATFLLDLPFNSFNNCNQFHQPFG 8091
Range 5: 7863 to 8096 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
163.7 bits(351) | 0.0 | 72/78(92%) | 0/78(0%) | Minus/Plus |
Query 1 PEVSNQPPILSGILAKRKRVIENALSKTVDMREVLRHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIAQ 234 PEVSNQPP LSGILAKRKRVIENALSKTVDMREVLRHESVVLSPNVMDEGAIDELIRAFGESGI+E+ QF+VAIDIA+ Subject 7863 PEVSNQPPTLSGILAKRKRVIENALSKTVDMREVLRHESVVLSPNVMDEGAIDELIRAFGESGIAENVQFDVAIDIAR 8096
Range 6: 7671 to 7808 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
92.7 bits(196) | 0.0 | 42/46(91%) | 0/46(0%) | Minus/Plus |
Query 289 ALASTEKEV*GGLKALGASQKVDEIDYSC*KS*MASQVGKLPGESN 426 ALA+T KEV GGLKALG SQKVDEIDYSC*KS*MASQVGKLPGESN Subject 7671 ALAATVKEVLGGLKALGVSQKVDEIDYSC*KS*MASQVGKLPGESN 7808
Range 7: 7862 to 8092 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
120.7 bits(257) | 0.0 | 70/77(91%) | 0/77(0%) | Plus/Minus |
Query 5 AISIATLN*SLSDMPDXXXXXXXXXXXXXXXTFGESTTDSCLKTSRISTVFESAFSITLFLLARMPLRMGGWLETSG 235 A+SIAT N + S MPDSPKARISSSIAPSSITFGESTTDSCLKTSRISTVFESAFSITLFLLARMPLR+GGWLETSG Subject 7862 AMSIATSNCTFSAMPDSPKARISSSIAPSSITFGESTTDSCLKTSRISTVFESAFSITLFLLARMPLRVGGWLETSG 8092
Grapevine rupestris stem pitting associated virus isolate VF1, partial genome
Sequence ID: KT948710.1 Length: 8716 Number of Matches: 8
Range 1: 7698 to 8093 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
252.2 bits(544) | 0.0 | 111/132(84%) | 0/132(0%) | Minus/Plus |
Query 5 VGRVEGFRG*PKG**N*LQLLKELNGKSSRKVAWRV**SI*SQA*GFRVSKGSKSSGSFQPASHS*WHSCQKEKSY*ECTLEDSGYA*SFKA*ICCTLPKCNG*GSNR*ADSCFWRVGHIRE*SI*RCNRYC 400 VG EGFRG*PK **N*LQLLKELNGKS+ KVAWRV *SI*SQ *GFRVSKGSKSSGSFQP SH+*WHSCQKEKS *ECTLEDSGYA*SFK *ICCT PKC+G*GSNR*ADSC W VGH R+ ++*RCNR+C Subject 7698 VGWSEGFRG*PKS**N*LQLLKELNGKSNWKVAWRVK*SI*SQT*GFRVSKGSKSSGSFQPTSHT*WHSCQKEKSD*ECTLEDSGYA*SFKT*ICCTFPKCDG*GSNR*ADSCLWGVGHSRKCAV*RCNRHC 8093
Range 2: 7735 to 8091 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
251.7 bits(543) | 0.0 | 104/119(87%) | 0/119(0%) | Plus/Minus |
Query 7 NIYCNVKLITL*YARLSKSTNQLIYCSLIHYIWGEYNRFMP*NFTHIHCLRECILNNSFPFGKNATKNGRLVGNFRSFLSPC*L*SLKPGFICFIRLARQLSDLTCHLTLSTTVINFIN 363 N+YCNVKL YARL K TNQLIYCSLIH+IWG+YNRFM *NFTHIHCLRECILN+SFPFGKNATK GRLVGNFRSFLSPC*L*SLK GFICFI LARQLS+LTCHLTLSTTVINFIN Subject 7735 NVYCNVKLRIFGYARLPKGTNQLIYCSLIHHIWGKYNRFMS*NFTHIHCLRECILNHSFPFGKNATKCGRLVGNFRSFLSPC*L*SLKSGFICFI*LARQLSNLTCHLTLSTTVINFIN 8091
Range 3: 7691 to 8092 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
238.0 bits(513) | 0.0 | 111/134(83%) | 0/134(0%) | Minus/Plus |
Query 6 RKCREG*RL*GLAKRLMKLITVVERVKWQVKSESCLASLMKHMKPGLRL*S*QGLKKLRKFPTSLPFLVAFLPKGKELLRMHSRRQWICVKF*GMNLLYSPQM*WMREQ*MS*FVLLESRAYQRVINLTLQ*IL 407 ++C *RL*GLAK+LMKLITVVERVKWQVK ESCLAS MKHMKP LRL*S*QGLKKLRKFPT+LP LVAFLPKGKE LRMHSRRQWICVKF* MNLLY PQM*WMREQ*MS*FV L SRA ++ +LTLQ* L Subject 7691 KRCWVV*RL*GLAKKLMKLITVVERVKWQVKLESCLASQMKHMKPDLRL*S*QGLKKLRKFPTNLPHLVAFLPKGKE*LRMHSRRQWICVKF*DMNLLYFPQM*WMREQ*MS*FVPLGSRA*PKMRSLTLQ*TL 8092
Range 4: 7864 to 8097 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
164.2 bits(352) | 0.0 | 72/78(92%) | 0/78(0%) | Minus/Plus |
Query 1 PEVSNQPPILSGILAKRKRVIENALSKTVDMREVLRHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIAQ 234 PEVSNQPP LSGILAKRKRVIENALSKTVDMREVLRHESVVLSPNVMDEGAIDELIRAFGESGI+E+ QF+VAIDIA+ Subject 7864 PEVSNQPPTLSGILAKRKRVIENALSKTVDMREVLRHESVVLSPNVMDEGAIDELIRAFGESGIAENAQFDVAIDIAR 8097
Range 5: 7672 to 7809 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
92.3 bits(195) | 0.0 | 41/46(89%) | 0/46(0%) | Minus/Plus |
Query 289 ALASTEKEV*GGLKALGASQKVDEIDYSC*KS*MASQVGKLPGESN 426 ALA+T KEV GGLKALG SQKVDEIDYSC*KS*MASQ+GKLPGESN Subject 7672 ALAATVKEVLGGLKALGVSQKVDEIDYSC*KS*MASQIGKLPGESN 7809
Range 6: 7727 to 8092 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
228.3 bits(492) | 0.0 | 102/122(84%) | 0/122(0%) | Plus/Minus |
Query 6 QYLLQR*IDHSLICPTLQKHESAXXXXXXXXXXGRVQQIHALKLHAYPLSSRVHSQ*LFSFWQECH*EWEAGWKLPELFEPLLTLKP*AWLHMLH*TRQATFRLDLPFNSFNNCNQFHQPFG 371 Q LLQR H +CPT Q+HESAHLLLPHP HLG+VQQIH LKLHAYPLSSRVHSQ LFSFWQECH* WE GWKLPELFEPLLTLKP* WLHMLH TRQATF+ DLPFNSFNNCNQFHQ FG Subject 7727 QCLLQRQTAHFRLCPTPQRHESAHLLLPHPSHLGKVQQIHVLKLHAYPLSSRVHSQSLFSFWQECH*VWEVGWKLPELFEPLLTLKP*VWLHMLHLTRQATFQFDLPFNSFNNCNQFHQLFG 8092
Range 7: 7863 to 8093 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
117.9 bits(251) | 0.0 | 69/77(90%) | 0/77(0%) | Plus/Minus |
Query 5 AISIATLN*SLSDMPDXXXXXXXXXXXXXXXTFGESTTDSCLKTSRISTVFESAFSITLFLLARMPLRMGGWLETSG 235 A+SIAT N + S MPDSPKARISSSIAPSSITFGESTTDSCLKTSRISTVFESAFSITLFLLARMPL +GGWLETSG Subject 7863 AMSIATSNCAFSAMPDSPKARISSSIAPSSITFGESTTDSCLKTSRISTVFESAFSITLFLLARMPLSVGGWLETSG 8093
Rupestris stem pitting associated virus isolate CNO9 28 kDa coat protein gene, complete cds
Sequence ID: DQ364981.1 Length: 867 Number of Matches: 8
Range 1: 8 to 364 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
274.2 bits(592) | 0.0 | 111/119(93%) | 0/119(0%) | Plus/Minus |
Query 7 NIYCNVKLITL*YARLSKSTNQLIYCSLIHYIWGEYNRFMP*NFTHIHCLRECILNNSFPFGKNATKNGRLVGNFRSFLSPC*L*SLKPGFICFIRLARQLSDLTCHLTLSTTVINFIN 363 N+YCN+KL YARLSKSTNQLIYCSLIHYIWGEYNRFMP*NFTHIHCLRECILNNSFPFGKNATK+GRLVGNFRSFLSPC*L*SLKP FICFIRLARQLSDLTCHLTLSTTVINFIN Subject 8 NVYCNIKLHIFGYARLSKSTNQLIYCSLIHYIWGEYNRFMP*NFTHIHCLRECILNNSFPFGKNATKSGRLVGNFRSFLSPC*L*SLKPDFICFIRLARQLSDLTCHLTLSTTVINFIN 364
Range 2: 1 to 369 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
265.0 bits(572) | 0.0 | 115/123(93%) | 0/123(0%) | Minus/Plus |
Query 2 PKG**N*LQLLKELNGKSSRKVAWRV**SI*SQA*GFRVSKGSKSSGSFQPASHS*WHSCQKEKSY*ECTLEDSGYA*SFKA*ICCTLPKCNG*GSNR*ADSCFWRVGHIRE*SI*RCNRYCT 370 PKG**N*LQLLKELNGKSSRKVAWRV**SI*SQA*GFRVSKGSKSSGSFQPASHS*WHSCQKEKSY*ECTLEDSGYA*SFKA*ICCTLPKCNG*GSNR*ADSCFWRVGH R+ ++* CNR+C+ Subject 1 PKG**N*LQLLKELNGKSSRKVAWRV**SI*SQA*GFRVSKGSKSSGSFQPASHS*WHSCQKEKSY*ECTLEDSGYA*SFKA*ICCTLPKCNG*GSNR*ADSCFWRVGHSRKCAV*CCNRHCS 369
Range 3: 3 to 365 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
246.7 bits(532) | 0.0 | 111/121(92%) | 0/121(0%) | Minus/Plus |
Query 6 KRLMKLITVVERVKWQVKSESCLASLMKHMKPGLRL*S*QGLKKLRKFPTSLPFLVAFLPKGKELLRMHSRRQWICVKF*GMNLLYSPQM*WMREQ*MS*FVLLESRAYQRVINLTLQ*IL 368 KRLMKLITVVERVKWQVKSESCLASLMKHMK GLRL*S*QGLKKLRKFPTSLP LVAFLPKGKELLRMHSRRQWICVKF*GMNLLYSPQM*WMREQ*MS*FVLLESRA ++ +L LQ* L Subject 3 KRLMKLITVVERVKWQVKSESCLASLMKHMKSGLRL*S*QGLKKLRKFPTSLPLLVAFLPKGKELLRMHSRRQWICVKF*GMNLLYSPQM*WMREQ*MS*FVLLESRA*PKMCSLMLQ*TL 365
Range 4: 3 to 365 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
243.9 bits(526) | 0.0 | 112/121(93%) | 0/121(0%) | Plus/Minus |
Query 6 QYLLQR*IDHSLICPTLQKHESAXXXXXXXXXXGRVQQIHALKLHAYPLSSRVHSQ*LFSFWQECH*EWEAGWKLPELFEPLLTLKP*AWLHMLH*TRQATFRLDLPFNSFNNCNQFHQPF 368 Q LLQ H +CPTLQKHESAHLLLPHPLHLGRVQQIHALKLHAYPLSSRVHSQ*LFSFWQECH*EWEAGWKLPELFEPLLTLKP*A LHMLH*TRQATFRLDLPFNSFNNCNQFHQPF Subject 3 QCLLQHQTAHFRLCPTLQKHESAHLLLPHPLHLGRVQQIHALKLHAYPLSSRVHSQ*LFSFWQECH*EWEAGWKLPELFEPLLTLKP*A*LHMLH*TRQATFRLDLPFNSFNNCNQFHQPF 365
Range 5: 137 to 370 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
163.7 bits(351) | 0.0 | 72/78(92%) | 0/78(0%) | Minus/Plus |
Query 1 PEVSNQPPILSGILAKRKRVIENALSKTVDMREVLRHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIAQ 234 PEVSNQPP LSGILAKRKRVIENALSKTVDMREVLRHESVVLSPNVMDEGAIDELIRAFGESGI+E+ QF+VAIDIA+ Subject 137 PEVSNQPPTLSGILAKRKRVIENALSKTVDMREVLRHESVVLSPNVMDEGAIDELIRAFGESGIAENVQFDVAIDIAR 370
Range 6: 2 to 82 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
62.9 bits(131) | 0.0 | 27/27(100%) | 0/27(0%) | Minus/Plus |
Query 289 QKVDEIDYSC*KS*MASQVGKLPGESN 369 QKVDEIDYSC*KS*MASQVGKLPGESN Subject 2 QKVDEIDYSC*KS*MASQVGKLPGESN 82
Range 7: 136 to 366 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
120.7 bits(257) | 0.0 | 70/77(91%) | 0/77(0%) | Plus/Minus |
Query 5 AISIATLN*SLSDMPDXXXXXXXXXXXXXXXTFGESTTDSCLKTSRISTVFESAFSITLFLLARMPLRMGGWLETSG 235 A+SIAT N + S MPDSPKARISSSIAPSSITFGESTTDSCLKTSRISTVFESAFSITLFLLARMPLR+GGWLETSG Subject 136 AMSIATSNCTFSAMPDSPKARISSSIAPSSITFGESTTDSCLKTSRISTVFESAFSITLFLLARMPLRVGGWLETSG 366
Rupestris stem pitting associated virus isolate BL1 28 kDa coat protein gene, complete cds
Sequence ID: DQ364979.1 Length: 867 Number of Matches: 8
Range 1: 8 to 364 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
270.5 bits(584) | 0.0 | 109/119(92%) | 0/119(0%) | Plus/Minus |
Query 7 NIYCNVKLITL*YARLSKSTNQLIYCSLIHYIWGEYNRFMP*NFTHIHCLRECILNNSFPFGKNATKNGRLVGNFRSFLSPC*L*SLKPGFICFIRLARQLSDLTCHLTLSTTVINFIN 363 N+YCN+KL YARLSKSTNQL YCSLIHYIWGEYNRFMP*NFTH HCLRECILN+SFPFGKNATK+GRLVGNFRSFLSPC*L*SLKPGFICFIRLARQLSDLTCHLTLSTTVINFIN Subject 8 NVYCNIKLHIFGYARLSKSTNQLTYCSLIHYIWGEYNRFMP*NFTHTHCLRECILNDSFPFGKNATKSGRLVGNFRSFLSPC*L*SLKPGFICFIRLARQLSDLTCHLTLSTTVINFIN 364
Range 2: 1 to 369 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
262.7 bits(567) | 0.0 | 114/123(93%) | 0/123(0%) | Minus/Plus |
Query 2 PKG**N*LQLLKELNGKSSRKVAWRV**SI*SQA*GFRVSKGSKSSGSFQPASHS*WHSCQKEKSY*ECTLEDSGYA*SFKA*ICCTLPKCNG*GSNR*ADSCFWRVGHIRE*SI*RCNRYCT 370 PKG**N*LQLLKELNGKSSRKVAWRV**SI*SQA*GFRVSKGSKSSGSFQPASHS*WHSCQKEKS+*ECTLEDSGYA*SFKA*ICCTLPKCNG*GSNR*ADSCFWRVGH R+ ++* CNR+C+ Subject 1 PKG**N*LQLLKELNGKSSRKVAWRV**SI*SQA*GFRVSKGSKSSGSFQPASHS*WHSCQKEKSH*ECTLEDSGYA*SFKA*ICCTLPKCNG*GSNR*ADSCFWRVGHSRKCAV*CCNRHCS 369
Range 3: 3 to 365 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
250.8 bits(541) | 0.0 | 113/121(93%) | 0/121(0%) | Plus/Minus |
Query 6 QYLLQR*IDHSLICPTLQKHESAXXXXXXXXXXGRVQQIHALKLHAYPLSSRVHSQ*LFSFWQECH*EWEAGWKLPELFEPLLTLKP*AWLHMLH*TRQATFRLDLPFNSFNNCNQFHQPF 368 Q LLQ H +CPTLQKHESAHLLLPHPLHLGRVQQIHALKLHAYPLSSRVHSQ*LFSFWQECH*EWEAGWKLPELFEPLLTLKP*AWLHMLH*TRQATFRLDLPFNSFNNCNQFHQPF Subject 3 QCLLQHQTAHFRLCPTLQKHESAHLLLPHPLHLGRVQQIHALKLHAYPLSSRVHSQ*LFSFWQECH*EWEAGWKLPELFEPLLTLKP*AWLHMLH*TRQATFRLDLPFNSFNNCNQFHQPF 365
Range 4: 3 to 365 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
245.3 bits(529) | 0.0 | 109/121(90%) | 0/121(0%) | Minus/Plus |
Query 6 KRLMKLITVVERVKWQVKSESCLASLMKHMKPGLRL*S*QGLKKLRKFPTSLPFLVAFLPKGKELLRMHSRRQWICVKF*GMNLLYSPQM*WMREQ*MS*FVLLESRAYQRVINLTLQ*IL 368 KRLMKLITVVERVKWQVKSESCLASLMKHMKPGLRL*S*QGLKKLRKFPTSLP LVAFLPKGKE LRMHSRRQW+CVKF*GMNLLYSPQM*WMREQ*+S*FVLLESRA ++ +L LQ* L Subject 3 KRLMKLITVVERVKWQVKSESCLASLMKHMKPGLRL*S*QGLKKLRKFPTSLPLLVAFLPKGKESLRMHSRRQWVCVKF*GMNLLYSPQM*WMREQ*VS*FVLLESRA*PKMCSLMLQ*TL 365
Range 5: 137 to 370 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
157.3 bits(337) | 0.0 | 70/78(90%) | 0/78(0%) | Minus/Plus |
Query 1 PEVSNQPPILSGILAKRKRVIENALSKTVDMREVLRHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIAQ 234 PEVSNQPP LSGILAKRKRVIENALSKTV MREVLRHESVVLSPNVMDEGAI ELIRAFGESGI+E+ QF+VAIDIA+ Subject 137 PEVSNQPPTLSGILAKRKRVIENALSKTVGMREVLRHESVVLSPNVMDEGAIGELIRAFGESGIAENVQFDVAIDIAR 370
Range 6: 2 to 82 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
62.9 bits(131) | 0.0 | 27/27(100%) | 0/27(0%) | Minus/Plus |
Query 289 QKVDEIDYSC*KS*MASQVGKLPGESN 369 QKVDEIDYSC*KS*MASQVGKLPGESN Subject 2 QKVDEIDYSC*KS*MASQVGKLPGESN 82
Range 7: 136 to 366 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
117.0 bits(249) | 0.0 | 67/77(87%) | 0/77(0%) | Plus/Minus |
Query 5 AISIATLN*SLSDMPDXXXXXXXXXXXXXXXTFGESTTDSCLKTSRISTVFESAFSITLFLLARMPLRMGGWLETSG 235 A+SIAT N + S MPDSPKARISS IAPSSITFGESTTDSCLKTSRI TVFESAFS+TLFLLARMPLR+GGWLETSG Subject 136 AMSIATSNCTFSAMPDSPKARISSPIAPSSITFGESTTDSCLKTSRIPTVFESAFSMTLFLLARMPLRVGGWLETSG 366
Rupestris stem pitting associated virus isolate NE423PM IV 28 kDa coat protein gene, complete cds
Sequence ID: DQ364989.1 Length: 867 Number of Matches: 8
Range 1: 8 to 364 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
268.2 bits(579) | 0.0 | 110/119(92%) | 0/119(0%) | Plus/Minus |
Query 7 NIYCNVKLITL*YARLSKSTNQLIYCSLIHYIWGEYNRFMP*NFTHIHCLRECILNNSFPFGKNATKNGRLVGNFRSFLSPC*L*SLKPGFICFIRLARQLSDLTCHLTLSTTVINFIN 363 N+YCN+KL YARLSKSTNQLIYCSLIHYI GEYNRFMP*NFTHI+CLRECILNNSFPFGKNATK+GRLVGNFRSFLSPC*L*SLKPGFICFIRLARQLSDLTCHLTLSTTVINFIN Subject 8 NVYCNIKLHIFGYARLSKSTNQLIYCSLIHYIRGEYNRFMP*NFTHIYCLRECILNNSFPFGKNATKSGRLVGNFRSFLSPC*L*SLKPGFICFIRLARQLSDLTCHLTLSTTVINFIN 364
Range 2: 1 to 369 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
251.7 bits(543) | 0.0 | 110/123(89%) | 0/123(0%) | Minus/Plus |
Query 2 PKG**N*LQLLKELNGKSSRKVAWRV**SI*SQA*GFRVSKGSKSSGSFQPASHS*WHSCQKEKSY*ECTLEDSGYA*SFKA*ICCTLPKCNG*GSNR*ADSCFWRVGHIRE*SI*RCNRYCT 370 P+ **N* QLLKELNGKSSRKVAWRV**SI*SQA*GFRVSKGSKSSGSFQPASHS*WHSCQKEKSY*ECTLEDS YA*SFKA*ICCTLP+CNG*GSNR*ADSCFWRVGH R+ ++* CNR+C+ Subject 1 PED**N*SQLLKELNGKSSRKVAWRV**SI*SQA*GFRVSKGSKSSGSFQPASHS*WHSCQKEKSY*ECTLEDSRYA*SFKA*ICCTLPECNG*GSNR*ADSCFWRVGHSRKCAV*CCNRHCS 369
Range 3: 3 to 365 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
240.3 bits(518) | 0.0 | 109/121(90%) | 0/121(0%) | Minus/Plus |
Query 6 KRLMKLITVVERVKWQVKSESCLASLMKHMKPGLRL*S*QGLKKLRKFPTSLPFLVAFLPKGKELLRMHSRRQWICVKF*GMNLLYSPQM*WMREQ*MS*FVLLESRAYQRVINLTLQ*IL 368 +RLMKLITVVERVKWQVKSESCLASLMKHMKPGLRL*S*QGLKKLRKFPTSLP LVAFLPKGKELLRMHSRRQ ICVKF*GMNLLYSP+M*WMREQ*MS*FVLLESRA ++ +L LQ* L Subject 3 RRLMKLITVVERVKWQVKSESCLASLMKHMKPGLRL*S*QGLKKLRKFPTSLPLLVAFLPKGKELLRMHSRRQ*ICVKF*GMNLLYSPRM*WMREQ*MS*FVLLESRA*PKMCSLMLQ*TL 365
Range 4: 9 to 365 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
238.0 bits(513) | 0.0 | 108/119(91%) | 0/119(0%) | Plus/Minus |
Query 6 QYLLQR*IDHSLICPTLQKHESAXXXXXXXXXXGRVQQIHALKLHAYPLSSRVHSQ*LFSFWQECH*EWEAGWKLPELFEPLLTLKP*AWLHMLH*TRQATFRLDLPFNSFNNCNQFHQ 362 Q LLQ H +CPTLQKHESAHLLLPHPLH GRVQQIHALKLHAY LSSRVHSQ*LFSFWQECH*EWEAGWKLPELFEPLLTLKP*AWLHMLH*TRQATFRLDLPFNSFNNC+QFHQ Subject 9 QCLLQHQTAHFRLCPTLQKHESAHLLLPHPLHSGRVQQIHALKLHAYLLSSRVHSQ*LFSFWQECH*EWEAGWKLPELFEPLLTLKP*AWLHMLH*TRQATFRLDLPFNSFNNCDQFHQ 365
Range 5: 137 to 370 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
163.7 bits(351) | 0.0 | 72/78(92%) | 0/78(0%) | Minus/Plus |
Query 1 PEVSNQPPILSGILAKRKRVIENALSKTVDMREVLRHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIAQ 234 PEVSNQPP LSGILAKRKRVIENALSKTVDMREVLRHESVVLSPNVMDEGAIDELIRAFGESGI+E+ QF+VAIDIA+ Subject 137 PEVSNQPPTLSGILAKRKRVIENALSKTVDMREVLRHESVVLSPNVMDEGAIDELIRAFGESGIAENVQFDVAIDIAR 370
Range 6: 2 to 82 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
60.2 bits(125) | 0.0 | 25/27(93%) | 0/27(0%) | Minus/Plus |
Query 289 QKVDEIDYSC*KS*MASQVGKLPGESN 369 QK+DEID+SC*KS*MASQVGKLPGESN Subject 2 QKIDEIDHSC*KS*MASQVGKLPGESN 82
Range 7: 136 to 366 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
120.7 bits(257) | 0.0 | 70/77(91%) | 0/77(0%) | Plus/Minus |
Query 5 AISIATLN*SLSDMPDXXXXXXXXXXXXXXXTFGESTTDSCLKTSRISTVFESAFSITLFLLARMPLRMGGWLETSG 235 A+SIAT N + S MPDSPKARISSSIAPSSITFGESTTDSCLKTSRISTVFESAFSITLFLLARMPLR+GGWLETSG Subject 136 AMSIATSNCTFSAMPDSPKARISSSIAPSSITFGESTTDSCLKTSRISTVFESAFSITLFLLARMPLRVGGWLETSG 366
Nucleotide Sequence (756 letters)
Query ID: | ds2016-133_14 |
Query definition: | No definition line |
Query length: | 603 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
581.2 | 3083.9 | 31% | 5.637e-164 | 95% | AY368590.1 | |
572.0 | 2694.9 | 31% | 3.234e-161 | 80% | KX274275.1 | |
524.8 | 1646.6 | 15% | 5.185e-147 | 42% | KX274277.1 | |
523.9 | 1641.1 | 24% | 9.787e-147 | 40% | AY881627.1 | |
522.5 | 1670.0 | 25% | 2.538e-146 | 47% | KX925556.1 |
Alignments
Rupestris stem pitting associated virus strain Syrah, complete genome
Sequence ID: AY368590.1 Length: 8742 Number of Matches: 10
Range 1: 2956 to 3684 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
581.2 bits(1262) | 0.0 | 241/243(99%) | 0/243(0%) | Plus/Plus |
Query 27 GTGLSQVLAMPRSKKQSILVLEGALSLETDYGPKILGSFEVFKGDFNIKKIEDSSIFVISYRAPVRSTGKLRVHKSACSFSGSRELLLDCQIEASADFEIEDFNTFPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDPALSSPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPS 755 GTGLSQVLAMPRSKKQSILVLEGALSLETDYGPKILGSFEVFKGDFNIKKIEDSSIFVISYRAPVRSTGKLRVHKSACSFSGSRELLL CQIEASADFEIEDFNTFPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDPALS+PTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPS Subject 2956 GTGLSQVLAMPRSKKQSILVLEGALSLETDYGPKILGSFEVFKGDFNIKKIEDSSIFVISYRAPVRSTGKLRVHKSACSFSGSRELLLGCQIEASADFEIEDFNTFPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDPALSNPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPS 3684
Range 2: 2956 to 3684 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
523.9 bits(1137) | 0.0 | 233/243(96%) | 0/243(0%) | Minus/Minus |
Query 27 AGPT*VIEHVYLTPSKC*CNSCNHAAIKRGTRLKMIGL*TQNST*RPFILPKLPAHFIFWRYNDQSHMMPNTE*GNHFIFCISVFTKLLPYSWA*KSWINW*FTFHKRSYSCLQS*TICXXXXXXXXXXXVTITRHRKSVEVFNFKVS*CLNLTVQ*QLP*PRK*ACRFVNS*LACGSDWSPVRYHKYGAIFYLFNVKIPLKNFK*SQDFWTVVSF*RKGPFKNKD*LFLASWHGQNL*QARP 755 AGPT*VIEHVYLTPSKC*CNSCNHAAIKRGTRLKMIGL*TQNST*RPFILPKLPAHFIFWRYNDQSHMMPNTE*GNHFIFCIS+FTKLLPYSW *KSWIN *FTFHKR YS LQS*TICAKKK N*VPKAVTITRHRKSVEVFNFKVS*CLNLT Q*QLP*PRK*ACRFVNS*LACGSDWSPVRYHKYGAIFYLFNV+IP KNFK*SQDFWTVVSF*RKGPFKNKD*LFLASWHGQNL*QA P Subject 2956 AGPT*VIEHVYLTPSKC*CNSCNHAAIKRGTRLKMIGL*TQNST*RPFILPKLPAHFIFWRYNDQSHMMPNTE*GNHFIFCISIFTKLLPYSWV*KSWINR*FTFHKRPYSRLQS*TICAKKKTN*VPKAVTITRHRKSVEVFNFKVS*CLNLTAQ*QLP*PRK*ACRFVNS*LACGSDWSPVRYHKYGAIFYLFNVEIPFKNFK*SQDFWTVVSF*RKGPFKNKD*LFLASWHGQNL*QAGP 3684
Range 3: 2954 to 3484 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
395.6 bits(857) | 0.0 | 168/177(95%) | 0/177(0%) | Minus/Minus |
Query 25 HDA*HRIRQSFHFLHKRFHQVASV*LGLKELDQLVIHFPQTILFLPSKLDHLC*EESQLSAKSSYHHQAQEKC*SLQFQSQLMPQFDSPITAPLTQKMSMQICELLACLWI*LEPCKISQIWSYLLSF*C*NPP*KLQMIPRFLDRSQFLKKGPLQEQGLTVSCFLAWPELVTGPSR 555 HDA*HRIRQSFHFLHK FHQVASV*LGLKELDQ VIHFPQT LF PSKLDHLC*EE+QLSAKSSYHHQAQEKC*SLQFQSQLMPQFDSPIT PLTQKMSMQICELLACLWI*LEPCKISQIWSYLLSF*C*NP *KLQMIPRFLDRSQFLKKGPLQEQGLTVSCFLAWPELVTG S+ Subject 2954 HDA*HRIRQSFHFLHKHFHQVASV*LGLKELDQPVIHFPQTTLFPPSKLDHLC*EENQLSAKSSYHHQAQEKC*SLQFQSQLMPQFDSPITTPLTQKMSMQICELLACLWI*LEPCKISQIWSYLLSF*C*NPL*KLQMIPRFLDRSQFLKKGPLQEQGLTVSCFLAWPELVTGRSQ 3484
Range 4: 3527 to 3685 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
129.4 bits(276) | 0.0 | 52/53(98%) | 0/53(0%) | Minus/Minus |
Query 598 CWAYISN*ARLPHAFQVLMQ*L*SCSH*EGHKVENDWTLNTEFHIEAIHSPQT 756 CWAYISN*ARLPHAFQVLMQ*L*SCSH*EGHKVENDWTLNT+FHIEAIHSPQT Subject 3527 CWAYISN*ARLPHAFQVLMQ*L*SCSH*EGHKVENDWTLNTKFHIEAIHSPQT 3685
Range 5: 3264 to 3683 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
290.2 bits(627) | 0.0 | 138/140(99%) | 0/140(0%) | Minus/Minus |
Query 335 LGLHK*LSTSTSRLPSADAIAVIMQPLRGAQG*K*LDFKHRIPHRGHSFSPNFQLTSYSGVIMISLT*CLTQNKXXXXXXXXXXSPSCFRIVGLERAGSTGDSLSTNDLIPAFKARPSVLRRKPTECQKQLPSPGTGKVL 754 LGLHK*LSTSTSRLPSADAIAVIMQPLRGAQG*K*LDFKH+IPHRGHSFSPNFQLTSYSGVIMISLT*CLTQNKAIISFSA*AFSPSCFRIVG ERAGSTGDSLSTNDLIPAFKARPSVLRRKPTECQKQLPSPGTGKVL Subject 3264 LGLHK*LSTSTSRLPSADAIAVIMQPLRGAQG*K*LDFKHKIPHRGHSFSPNFQLTSYSGVIMISLT*CLTQNKAIISFSA*AFSPSCFRIVGFERAGSTGDSLSTNDLIPAFKARPSVLRRKPTECQKQLPSPGTGKVL 3683
Range 6: 2955 to 3218 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
202.7 bits(436) | 0.0 | 87/88(99%) | 0/88(0%) | Minus/Minus |
Query 26 NNSSLDPENEHADL*TLSLPVDLTGAL*DITNMELSSIFLMLKSPLKTSNDPKIFGP*SVSKERAPSRTRIDCFLLLGMARTCDRPVP 289 NN+SLDPENEHADL*TLSLPVDLTGAL*DITNMELSSIFLMLKSPLKTSNDPKIFGP*SVSKERAPSRTRIDCFLLLGMARTCDRPVP Subject 2955 NNNSLDPENEHADL*TLSLPVDLTGAL*DITNMELSSIFLMLKSPLKTSNDPKIFGP*SVSKERAPSRTRIDCFLLLGMARTCDRPVP 3218
Range 7: 3342 to 3683 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
259.0 bits(559) | 0.0 | 109/114(96%) | 0/114(0%) | Plus/Plus |
Query 413 FEGRNKIVCGK*ITS*SSSFKPNYTEATW*KRLCRK*NDCLILC*ASCETDHYNARI*SELEVWGE*MASMWNSVFKVQSFSTLCPS*WLHDYSYCISTWKA*GRRAQLLM*AQ 754 FEG NK+VCGK*IT *SSSFKPNYTEATW*K LCRK*NDCLILC*ASCETDHYNARI*SELEVWGE*MASMWN VFKVQSFSTLCPS*WLHDYSYCISTWKA*GRRAQLLM*AQ Subject 3342 FEGGNKVVCGK*ITG*SSSFKPNYTEATW*KCLCRK*NDCLILC*ASCETDHYNARI*SELEVWGE*MASMWNFVFKVQSFSTLCPS*WLHDYSYCISTWKA*GRRAQLLM*AQ 3683
Range 8: 2958 to 3281 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
232.5 bits(501) | 0.0 | 104/108(96%) | 0/108(0%) | Plus/Plus |
Query 29 DGPVTSSGHAKKQETVNPCS*RGPFFRN*LRSKNLGII*SF*GGF*H*KDRR*LHICDILQGSSQIHRQAKSSQICMLIFWVKGAVIGLSN*GIS*L*N*RLQHFSCA 352 D PVTSSGHAKKQETVNPCS*RGPFFRN*LRSKNLGII*SF* GF H*KDRR*LHICDILQGSSQIHRQAKSSQICMLIFWVKG VIGLSN*GIS*L*N*RLQHFSCA Subject 2958 DRPVTSSGHAKKQETVNPCS*RGPFFRN*LRSKNLGII*SF*RGFQH*KDRR*LHICDILQGSSQIHRQAKSSQICMLIFWVKGVVIGLSN*GIS*L*N*RLQHFSCA 3281
Range 9: 2957 to 3598 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
431.8 bits(936) | 0.0 | 204/214(95%) | 0/214(0%) | Plus/Plus |
Query 28 GRACHKFWPCQEARNSQSLFLKGPFL*KLTTVQKSWDHLKFLRGILTLKR*KIAPYL*YLTGLQSDPQAS*EFTNLHAHFLGQGSCYWTVKLRHQXXXXXXXXXXXXXXVMVTAFGTQLAFFLAQMV*L*RQE*DRLWKVNHQLIQLFQAQLYGSNLVKTLMQKMK*LPYSVLGIM*D*SL*RQNMK*AGSLGRMNGLYVEFCV*SPIIFNLVP 669 G ACHKFWPCQEARNSQSLFLKGPFL*KLTTVQKSWDHLKFL+GI TLKR*KIAPYL*YLTGLQSDPQAS*EFTNLHAHFLGQGSCYW VKLRHQLTLKLKTSTLFLCLVMVTAFGTQL FFLAQMV*L*R+E* RLWKVNH+LIQLFQ QLYGSNLVK LMQKMK*LPYSVLGIM*D*SL*RQNMK*AGSLGRMNGLYVEFCV*SPIIFNLVP Subject 2957 GPACHKFWPCQEARNSQSLFLKGPFL*KLTTVQKSWDHLKFLKGISTLKR*KIAPYL*YLTGLQSDPQAS*EFTNLHAHFLGQGSCYWAVKLRHQLTLKLKTSTLFLCLVMVTAFGTQLVFFLAQMV*L*RRE*GRLWKVNHRLIQLFQTQLYGSNLVKMLMQKMK*LPYSVLGIM*D*SL*RQNMK*AGSLGRMNGLYVEFCV*SPIIFNLVP 3598
Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome
Sequence ID: KX274275.1 Length: 8724 Number of Matches: 10
Range 1: 2956 to 3684 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
572.0 bits(1242) | 0.0 | 237/243(98%) | 0/243(0%) | Plus/Plus |
Query 27 GTGLSQVLAMPRSKKQSILVLEGALSLETDYGPKILGSFEVFKGDFNIKKIEDSSIFVISYRAPVRSTGKLRVHKSACSFSGSRELLLDCQIEASADFEIEDFNTFPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDPALSSPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPS 755 GTGLSQVLAMPRSKKQSILVLEGALSLETDYGPKILGSFEVFKGDF+IKKIED SIFVISYRAPVRSTGKLRVHKS CSFSGSRELLL C IEASADFEIEDFNTFPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDPALS PTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPS Subject 2956 GTGLSQVLAMPRSKKQSILVLEGALSLETDYGPKILGSFEVFKGDFSIKKIEDGSIFVISYRAPVRSTGKLRVHKSTCSFSGSRELLLGCPIEASADFEIEDFNTFPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDPALSGPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPS 3684
Range 2: 2955 to 3683 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
460.2 bits(998) | 0.0 | 227/243(93%) | 0/243(0%) | Minus/Minus |
Query 26 LGLHK*LSTSTSRLPSADAIAVIMQPLRGAQG*K*LDFKHRIPHRGHSFSPNFQLTSYSGVIMISLT*CLTQNKXXXXXXXXXXSPSCFRIVGLERAGSTGDSLSTNDLIPAFKARPSVLRRKPTECQKQLPSPGTGKVLXXXXXXXXXXXXXXSNNSSLDPENEHADL*TLSLPVDLTGAL*DITNMELSSIFLMLKSPLKTSNDPKIFGP*SVSKERAPSRTRIDCFLLLGMARTCDRPVP 754 LGLHK*LSTSTSRLPSADA+AVIMQPLRGAQG*K* DFKH+IPHRGHSFSPNFQLTSYSGVI+ISLT CLTQNKAIISFSA*AFSPSCFR+VG ERAGSTGDSLSTNDLIPAFKA+PSVLRRKPTECQKQLPSPGTGKVLKSSISKSADASI Q NN+SLDPENEH DL*TLSLPVDLTGAL*DIT ME SSIFL+LKSPLKTSNDPKIFGP*SVSKERAPSRTRIDCFLLLG+ARTCDRPVP Subject 2955 LGLHK*LSTSTSRLPSADAMAVIMQPLRGAQG*K*FDFKHKIPHRGHSFSPNFQLTSYSGVIIISLTWCLTQNKAIISFSA*AFSPSCFRMVGPERAGSTGDSLSTNDLIPAFKAKPSVLRRKPTECQKQLPSPGTGKVLKSSISKSADASIGQPNNNSLDPENEHVDL*TLSLPVDLTGAL*DITKMEPSSIFLILKSPLKTSNDPKIFGP*SVSKERAPSRTRIDCFLLLGIARTCDRPVP 3683
Range 3: 3331 to 3684 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
245.8 bits(530) | 0.0 | 97/118(82%) | 0/118(0%) | Minus/Minus |
Query 402 AGPT*VIEHVYLTPSKC*CNSCNHAAIKRGTRLKMIGL*TQNST*RPFILPKLPAHFIFWRYNDQSHMMPNTE*GNHFIFCISVFTKLLPYSWA*KSWINW*FTFHKRSYSCLQS*TI 755 A PT +IEHVYLTPSKC*CN CNHAAIKRGTRLKMI L TQNST*RP I PKLPAH IFW YN+QSHM+PN E*GNHFIFC+S+FTKLLPY WA KSWINW*FTFH+R YSCLQS T+ Subject 3331 AWPTQIIEHVYLTPSKC*CNGCNHAAIKRGTRLKMI*LQTQNST*RPLIFPKLPAHLIFWCYNNQSHMVPNAE*GNHFIFCVSIFTKLLPYGWARKSWINW*FTFHERPYSCLQSQTV 3684
Range 4: 2956 to 3291 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
213.2 bits(459) | 0.0 | 92/112(82%) | 0/112(0%) | Minus/Minus |
Query 27 TITRHRKSVEVFNFKVS*CLNLTVQ*QLP*PRK*ACRFVNS*LACGSDWSPVRYHKYGAIFYLFNVKIPLKNFK*SQDFWTVVSF*RKGPFKNKD*LFLASWHGQNL*QARP 362 TITRHRKSVEVFNF++S*CLN Q*QLP P K*ACRFVNS*LA SDWSPVRY+K G IFYLFN +IP KNFK*SQDFWTVVSF*RKGPFK+KD LFLASWH Q+L*QA P Subject 2956 TITRHRKSVEVFNFEIS*CLNRAAQ*QLPRPGK*ACRFVNS*LAS*SDWSPVRYYKDGTIFYLFNTEIPFKNFK*SQDFWTVVSF*RKGPFKDKDRLFLASWHSQDL*QAGP 3291
Range 5: 2954 to 3484 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
315.4 bits(682) | 0.0 | 143/177(81%) | 0/177(0%) | Minus/Minus |
Query 25 HDA*HRIRQSFHFLHKRFHQVASV*LGLKELDQLVIHFPQTILFLPSKLDHLC*EESQLSAKSSYHHQAQEKC*SLQFQSQLMPQFDSPITAPLTQKMSMQICELLACLWI*LEPCKISQIWSYLLSF*C*NPP*KLQMIPRFLDRSQFLKKGPLQEQGLTVSCFLAWPELVTGPSR 555 H A* RIRQSFHFL K FHQVASV LG KELDQLVIHFP+T LFLPSK + C*EESQLSAKSSYHHQAQEKC*SLQF++QLMPQ SPIT P T+KMSM ICELLAC I*LEPCKI Q W++LLSF* *NP *KLQMIPRFLDRSQFLKKGPLQ QG TVSCFLA P LVTG S+ Subject 2954 HGA*RRIRQSFHFLRKHFHQVASVWLGPKELDQLVIHFPRTTLFLPSKPNRRC*EESQLSAKSSYHHQAQEKC*SLQFRNQLMPQSGSPITTPSTRKMSM*ICELLACQLI*LEPCKILQRWNHLLSF*Y*NPL*KLQMIPRFLDRSQFLKKGPLQGQGSTVSCFLA*PGLVTGRSQ 3484
Range 6: 3527 to 3685 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.9 bits(216) | 0.0 | 43/53(81%) | 0/53(0%) | Minus/Minus |
Query 598 CWAYISN*ARLPHAFQVLMQ*L*SCSH*EGHKVENDWTLNTEFHIEAIHSPQT 756 C AY +N*ARLPHAFQVLMQ L*SCSH*EGHK END T NT+FHIEA H PQT Subject 3527 CLAYTNN*ARLPHAFQVLMQWL*SCSH*EGHKAENDLTSNTKFHIEATHFPQT 3685
Range 7: 3342 to 3683 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
216.0 bits(465) | 0.0 | 93/114(82%) | 0/114(0%) | Plus/Plus |
Query 413 FEGRNKIVCGK*ITS*SSSFKPNYTEATW*KRLCRK*NDCLILC*ASCETDHYNARI*SELEVWGE*MASMWNSVFKVQSFSTLCPS*WLHDYSYCISTWKA*GRRAQLLM*AQ 754 FEGRNK+V GK*ITS*SSSF PN+TEATW*K L RK*NDCLIL *A CETD+YN RI* ELEVWG+*+ASMWN VF+V+SFS LCPS*WLHDYS+CISTWKA*GRRAQL +*A+ Subject 3342 FEGRNKVVRGK*ITS*SSSFGPNHTEATW*KCLRRK*NDCLILR*APCETDYYNTRI*GELEVWGK*VASMWNFVFEVKSFSALCPS*WLHDYSHCISTWKA*GRRAQLFV*AK 3683
Range 8: 2958 to 3281 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
183.9 bits(395) | 0.0 | 86/108(80%) | 0/108(0%) | Plus/Plus |
Query 29 DGPVTSSGHAKKQETVNPCS*RGPFFRN*LRSKNLGII*SF*GGF*H*KDRR*LHICDILQGSSQIHRQAKSSQICMLIFWVKGAVIGLSN*GIS*L*N*RLQHFSCA 352 D PVTS G+AKKQETV+PC *RGPFFRN*LRSKNLGII*SF* GF +*KDRR H+C+ILQGSSQI+ QAKSSQI MLIF V+G VIGL +*GIS* N*RLQHFSCA Subject 2958 DRPVTSPGYAKKQETVDPCP*RGPFFRN*LRSKNLGII*SF*RGFQY*KDRRWFHLCNILQGSSQINWQAKSSQIYMLIFRVEGVVIGLPD*GIS*FRN*RLQHFSCA 3281
Range 9: 2957 to 3598 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
359.4 bits(778) | 0.0 | 175/214(82%) | 0/214(0%) | Plus/Plus |
Query 28 GRACHKFWPCQEARNSQSLFLKGPFL*KLTTVQKSWDHLKFLRGILTLKR*KIAPYL*YLTGLQSDPQAS*EFTNLHAHFLGQGSCYWTVKLRHQXXXXXXXXXXXXXXVMVTAFGTQLAFFLAQMV*L*RQE*DRLWKVNHQLIQLFQAQLYGSNLVKTLMQKMK*LPYSVLGIM*D*SL*RQNMK*AGSLGRMNGLYVEFCV*SPIIFNLVP 669 G ACHK W CQEARNS+SL LKGPFL*KLTTVQKSWDHLKFL+GI LKR*K+ P L*YLTGLQSD AS*EFTNLHAHF G+GSCYW +LRHQL KLKTSTLFLCLVMVTAFGTQLAFF A V L*RQE* R WKVNHQLIQLF+AQ YGSNLVK L QKMK*LPYS LG M*D* L* QNM+*AGSLG+M+GLYVEFCV*S IIF+LVP Subject 2957 GPACHKSWLCQEARNSRSLSLKGPFL*KLTTVQKSWDHLKFLKGISVLKR*KMVPSL*YLTGLQSDQLAS*EFTNLHAHFPGRGSCYWAARLRHQLISKLKTSTLFLCLVMVTAFGTQLAFFSAPTVWL*RQE*GRSWKVNHQLIQLFRAQPYGSNLVKMLTQKMK*LPYSALGTM*D*LL*HQNMR*AGSLGKMSGLYVEFCV*SQIIFSLVP 3598
Grapevine rupestris stem pitting associated virus isolate SK30, complete genome
Sequence ID: KX274277.1 Length: 8724 Number of Matches: 11
Range 1: 2956 to 3684 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
524.8 bits(1139) | 0.0 | 211/243(87%) | 0/243(0%) | Plus/Plus |
Query 27 GTGLSQVLAMPRSKKQSILVLEGALSLETDYGPKILGSFEVFKGDFNIKKIEDSSIFVISYRAPVRSTGKLRVHKSACSFSGSRELLLDCQIEASADFEIEDFNTFPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDPALSSPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPS 755 G GL +VL MPRSKKQSILVLEGALS+ETDYGPK+LGSFEVFKGDFNIKK+E+ SIFVI+Y+APVRSTGKLRVHK+ CSFSGS+E+LL CQIEA AD++I+DFNTF VPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESE V P LS+PTI KQLGEN YAENEMIALFC+RHHVRLI+ITPEYEVSWKFGE+EWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLC+PS Subject 2956 GPGLPKVLEMPRSKKQSILVLEGALSVETDYGPKVLGSFEVFKGDFNIKKMEEGSIFVITYKAPVRSTGKLRVHKTECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESECLVSPNLSAPTIHKQLGENVYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCKPS 3684
Range 2: 3264 to 3683 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
218.7 bits(471) | 0.0 | 108/140(77%) | 0/140(0%) | Minus/Minus |
Query 335 LGLHK*LSTSTSRLPSADAIAVIMQPLRGAQG*K*LDFKHRIPHRGHSFSPNFQLTSYSGVIMISLT*CLTQNKXXXXXXXXXXSPSCFRIVGLERAGSTGDSLSTNDLIPAFKARPSVLRRKPTECQKQLPSPGTGKVL 754 LGLH+* STSTSRLP+A+A+AVIMQP GA G K* D + RIPHRGHS SPNFQLTSYSGVI ISLT CL QNKAIISFSA* FSP+C +VG ER G T SLST D IPAFKARPSVL +KPTECQKQLPSPGT KVL Subject 3264 LGLHR*FSTSTSRLPNAEAMAVIMQPFSGAHGWK*FDLRQRIPHRGHSLSPNFQLTSYSGVITISLTWCLMQNKAIISFSA*TFSPNCL*MVGAERFGLTRHSLSTKDRIPAFKARPSVLSKKPTECQKQLPSPGTEKVL 3683
Range 3: 2955 to 3218 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.9 bits(310) | 0.0 | 63/88(72%) | 0/88(0%) | Minus/Minus |
Query 26 NNSSLDPENEHADL*TLSLPVDLTGAL*DITNMELSSIFLMLKSPLKTSNDPKIFGP*SVSKERAPSRTRIDCFLLLGMARTCDRPVP 289 +N+SLDPENEH+ L TL+LPVDLTGAL IT ME SSIFLMLKSPL TS DP+ FGP*SVS ++APSRTR+DCFLL G+++T RP P Subject 2955 SNTSLDPENEHSVLWTLNLPVDLTGALYVITKMEPSSIFLMLKSPLNTSKDPRTFGP*SVSTDKAPSRTRMDCFLLRGISKTLGRPGP 3218
Range 4: 3331 to 3684 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
122.5 bits(261) | 0.0 | 56/118(47%) | 0/118(0%) | Minus/Minus |
Query 402 AGPT*VIEHVYLTPSKC*CNSCNHAAIKRGTRLKMIGL*TQNST*RPFILPKLPAHFIFWRYNDQSHMMPNTE*GNHFIFCISVFTKLLPYSWA*KSWINW*FTFHKRSYSCLQS*TI 755 AG +I+HV TP +C* N C+HA I+ G L++I T+NST* P LPKLP FIFW + Q HM+PN +*GNH I I++ ++L W+*+ W FT HKRS + L TI Subject 3331 AGLAQIIQHVNFTPPQC*SNGCDHATIQWGAWLEVI*FKTKNST*GPLTLPKLPTDFIFWCDHYQPHMVPNAK*GNHLILGINILSQLFVNGWS*EVWTY*AFTLHKRSNTSL*GKTI 3684
Range 5: 2983 to 3291 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
95.9 bits(203) | 0.0 | 46/103(45%) | 0/103(0%) | Minus/Minus |
Query 54 TITRHRKSVEVFNFKVS*CLNLTVQ*QLP*PRK*ACRFVNS*LACGSDWSPVRYHKYGAIFYLFNVKIPLKNFK*SQDFWTVVSF*RKGPFKNKD*LFLASWH 362 TITRHR+ +E+ N +S C NL L P K*A FV+ A GS+WS + YHK GA + +V++P + K SQ+ WT+V G FKN D L LA H Subject 2983 TITRHREGIEIINIIISTCFNLAA*QHLLGPGK*AFSFVDPQFAGGSNWSLICYHKNGAFLHFLDVEVPFEYLKRSQNLWTIVCLH**GTFKN*DGLLLAPGH 3291
Range 6: 3044 to 3484 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
134.4 bits(287) | 0.0 | 70/147(48%) | 0/147(0%) | Minus/Minus |
Query 115 HDA*HRIRQSFHFLHKRFHQVASV*LGLKELDQLVIHFPQTILFLPSKLDHLC*EESQLSAKSSYHHQAQEKC*SLQFQSQLMPQFDSPITAPLTQKMSMQICELLACLWI*LEPCKISQIWSYLLSF*C*NPP*KLQMIPRFLDRS 555 H A* +IRQS H HK + L L+ LD L IH PQ I + P + DH C* +++L+AK++YHHQAQ + *+ Q+ +Q M Q S T P T+KMS+Q C C WI*LEP +SQ WS *C*+P * Q IP LD S Subject 3044 HGA*CKIRQSSHSRHKHSLPIVCEWLELRGLDLLGIHSPQKIEYQPLRQDHQC*VKNRLNAKNNYHHQAQRRY*NHQYHNQHMLQSGSLATPPWTRKMSIQFCGPSICRWI*LEPYMLSQKWSLPPFS*C*SPL*IPQKIPEPLDHS 3484
Range 7: 3527 to 3685 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
58.8 bits(122) | 0.0 | 28/53(53%) | 0/53(0%) | Minus/Minus |
Query 598 CWAYISN*ARLPHAFQVLMQ*L*SCSH*EGHKVENDWTLNTEFHIEAIHSPQT 756 CWA N AR HA +L Q L*SC+H G V +D + EFHI A HSPQT Subject 3527 CWACTDNSARQLHASPMLKQWL*SCNHSVGRMVGSDLI*DKEFHIGATHSPQT 3685
Range 8: 3345 to 3683 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
118.4 bits(252) | 0.0 | 55/113(49%) | 0/113(0%) | Plus/Plus |
Query 416 EGRNKIVCGK*ITS*SSSFKPNYTEATW*KRLCRK*NDCLILC*ASCETDHYNARI*SELEVWGE*MASMWNSVFKVQSFSTLCPS*WLHDYSYCISTWKA*GRRAQLLM*AQ 754 +G I CG+*+ S S N+++ + LCR+*+DCLIL *A CE D + RI*S+LEVWGE*+A MWNS+ ++S T+ P+ WLHD+S+C S +A* RA+L + AQ Subject 3345 KGWYSIFCGE*MPSKSKPLSSNHSQTIGRECLCRE*DDCLILH*APCEADSDHTRI*SQLEVWGE*VAPMWNSLS*IKSLPTMRPTEWLHDHSHCFSIGEA*S*RAELSVQAQ 3683
Range 9: 2972 to 3238 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
73.9 bits(155) | 0.0 | 37/89(42%) | 0/89(0%) | Plus/Plus |
Query 43 KFWPCQEARNSQSLFLKGPFL*KLTTVQKSWDHLKFLRGILTLKR*KIAPYL*YLTGLQSDPQAS*EFTNLHAHFLGQGSCYWTVKLRH 309 KF C AR++ S FLK P+ + T VQ+ WD L++ +G T ++ + AP+L* LQ DP A+* T L+AHF G C +L+H Subject 2972 KF*KCPGARSNPS*FLKVPYQWRQTMVQRFWDLLRYSKGTSTSRKWRKAPFL**HIRLQLDPPAN*GSTKLNAHFPGPRRCC*AARLKH 3238
Range 10: 3284 to 3598 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
86.8 bits(183) | 0.0 | 50/105(48%) | 0/105(0%) | Plus/Plus |
Query 355 VMVTAFGTQLAFFLAQMV*L*RQE*DRLWKVNHQLIQLFQAQLYGSNLVKTLMQKMK*LPYSVLGIM*D*SL*RQNMK*AGSLGRMNGLYVEFCV*SPIIFNLVP 669 VMV FG Q F+ A MV *R D LW+VN +Q Q Q + +N + M +M+*LPY LG M* * QNMK GSLGR++G YVEF V + I N P Subject 3284 VMVIVFGIQSVFYSALMVLP*RLVFDLLWRVNA**VQTSQLQPFTNNWERMFMPRMR*LPYFALGTM*G***SHQNMKSVGSLGRVSGPYVEFFVLNQITSNHAP 3598
Range 11: 2964 to 3281 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
67.5 bits(141) | 0.0 | 45/106(42%) | 0/106(0%) | Plus/Plus |
Query 35 PVTSSGHAKKQETVNPCS*RGPFFRN*LRSKNLGII*SF*GGF*H*KDRR*LHICDILQGSSQIHRQAKSSQICMLIFWVKGAVIGLSN*GIS*L*N*RLQHFSCA 352 P S +A +QE ++P S*R + L SK GI * G H ++ LH CD + GSS IHRQ + Q MLIF V+G V L +* + *L* * Q+ CA Subject 2964 PT*SFRNAPEQEAIHPSS*RCLISGDRLWSKGSGIF*GIQRGLQHQENGGRLHFCDNI*GSS*IHRQIEGPQN*MLIFRVQGGVARLPD*SMC*L*Y**FQYLLCA 3281
Rupestris stem pitting associated virus strain BS, complete genome
Sequence ID: AY881627.1 Length: 8743 Number of Matches: 11
Range 1: 2956 to 3684 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
523.9 bits(1137) | 0.0 | 210/243(86%) | 0/243(0%) | Plus/Plus |
Query 27 GTGLSQVLAMPRSKKQSILVLEGALSLETDYGPKILGSFEVFKGDFNIKKIEDSSIFVISYRAPVRSTGKLRVHKSACSFSGSRELLLDCQIEASADFEIEDFNTFPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDPALSSPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPS 755 G LS+VL MPRSKKQSILVLEGALS+ETDYGPK+LGSF+VFKGDFNIKK+E+ SIFVI+Y+APVRSTGKLRVHK+ CSFSGS+E+LL CQIEA AD++I+DFNTF VPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESE V P+LS+PTI KQLGEN YAENEMIALFC+RHHVRLI+ITPEYEVSWKFGE+EWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLC+PS Subject 2956 GPSLSKVLEMPRSKKQSILVLEGALSVETDYGPKVLGSFKVFKGDFNIKKMEEGSIFVITYKAPVRSTGKLRVHKTECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESECLVSPSLSAPTIHKQLGENVYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCKPS 3684
Range 2: 3264 to 3683 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
220.5 bits(475) | 0.0 | 109/140(78%) | 0/140(0%) | Minus/Minus |
Query 335 LGLHK*LSTSTSRLPSADAIAVIMQPLRGAQG*K*LDFKHRIPHRGHSFSPNFQLTSYSGVIMISLT*CLTQNKXXXXXXXXXXSPSCFRIVGLERAGSTGDSLSTNDLIPAFKARPSVLRRKPTECQKQLPSPGTGKVL 754 LGLH+* STSTSRLP+A+A+AVIMQP GA G K* D + RIPHRGHS SPNFQLTSYSGVI ISLT CL QNKAIISFSA* FSPSC +VG ER G T SLST D IPAFKARPSVL +KPTECQKQLPSPGT KVL Subject 3264 LGLHR*FSTSTSRLPNAEAMAVIMQPFSGAHGWK*FDLRQRIPHRGHSLSPNFQLTSYSGVITISLTWCLMQNKAIISFSA*TFSPSCL*MVGAERLGLTRHSLSTKDRIPAFKARPSVLSKKPTECQKQLPSPGTEKVL 3683
Range 3: 2955 to 3218 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
143.1 bits(306) | 0.0 | 63/88(72%) | 0/88(0%) | Minus/Minus |
Query 26 NNSSLDPENEHADL*TLSLPVDLTGAL*DITNMELSSIFLMLKSPLKTSNDPKIFGP*SVSKERAPSRTRIDCFLLLGMARTCDRPVP 289 +N+SLDPENEH+ L*TL+LPVDLTGAL IT ME SSIFLMLKSPL T DP+ FGP*SVS ++APSRTR+DCFLL G+++T DR P Subject 2955 SNTSLDPENEHSVL*TLNLPVDLTGALYVITKMEPSSIFLMLKSPLNTLKDPRTFGP*SVSTDKAPSRTRMDCFLLRGISKTLDRLGP 3218
Range 4: 3331 to 3684 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.9 bits(264) | 0.0 | 56/118(47%) | 0/118(0%) | Minus/Minus |
Query 402 AGPT*VIEHVYLTPSKC*CNSCNHAAIKRGTRLKMIGL*TQNST*RPFILPKLPAHFIFWRYNDQSHMMPNTE*GNHFIFCISVFTKLLPYSWA*KSWINW*FTFHKRSYSCLQS*TI 755 AG +I+HV TP +C* N C+HA I+ G L++I T+NST* P LPKLP FIFW + Q HM+PN +*GNH I I++ ++L W+*++W FT HKRS + L TI Subject 3331 AGLAQIIQHVNFTPPQC*SNGCDHATIQWGAWLEVI*FKTKNST*GPLTLPKLPTDFIFWCDHYQPHMVPNAK*GNHLILGINILSQLFVNGWS*EAWTY*AFTLHKRSNTSL*GKTI 3684
Range 5: 2983 to 3291 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.0 bits(190) | 0.0 | 46/103(45%) | 0/103(0%) | Minus/Minus |
Query 54 TITRHRKSVEVFNFKVS*CLNLTVQ*QLP*PRK*ACRFVNS*LACGSDWSPVRYHKYGAIFYLFNVKIPLKNFK*SQDFWTVVSF*RKGPFKNKD*LFLASWH 362 TITRHR+ +EV N +S C NL L P K*A FVN A G + S + YHK GA + +V++P + K SQ+ WT+V G FKN D L LA H Subject 2983 TITRHREGIEVINIIISTCFNLAA*QHLLGPGK*AFSFVNPQFAGGPNRSLICYHKNGAFLHFLDVEVPFEYLKRSQNLWTIVCLH**GTFKN*DGLLLAPGH 3291
Range 6: 3345 to 3683 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
121.1 bits(258) | 0.0 | 56/113(50%) | 0/113(0%) | Plus/Plus |
Query 416 EGRNKIVCGK*ITS*SSSFKPNYTEATW*KRLCRK*NDCLILC*ASCETDHYNARI*SELEVWGE*MASMWNSVFKVQSFSTLCPS*WLHDYSYCISTWKA*GRRAQLLM*AQ 754 +G I CG+*+ S S N+++ T + LCR+*+DCLIL *A CE D + RI*S+LEVWGE*+A MWNS+ ++S T+ P+ WLHD+S+C S +A* RA+L + AQ Subject 3345 KGWYSIFCGE*MPSKSKPLSSNHSQTTGRECLCRE*DDCLILH*APCEADSDHTRI*SQLEVWGE*VAPMWNSLS*IKSLPTMRPTEWLHDHSHCFSIGEA*S*RAELSVQAQ 3683
Range 7: 2972 to 3238 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
72.5 bits(152) | 0.0 | 36/89(40%) | 0/89(0%) | Plus/Plus |
Query 43 KFWPCQEARNSQSLFLKGPFL*KLTTVQKSWDHLKFLRGILTLKR*KIAPYL*YLTGLQSDPQAS*EFTNLHAHFLGQGSCYWTVKLRH 309 KF C AR++ S FLK P+ + T VQ+ WD L++ +G T ++ + AP+L* L+ P A+* FT L+AHF G C +L+H Subject 2972 KF*KCPGARSNPS*FLKVPYQWRQTMVQRFWDLLRYSKGTSTSRKWRKAPFL**HIRLRLGPPAN*GFTKLNAHFPGPRRCC*AARLKH 3238
Range 8: 3044 to 3484 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
129.8 bits(277) | 0.0 | 70/147(48%) | 0/147(0%) | Minus/Minus |
Query 115 HDA*HRIRQSFHFLHKRFHQVASV*LGLKELDQLVIHFPQTILFLPSKLDHLC*EESQLSAKSSYHHQAQEKC*SLQFQSQLMPQFDSPITAPLTQKMSMQICELLACLWI*LEPCKISQIWSYLLSF*C*NPP*KLQMIPRFLDRS 555 H A* +IRQS H HK V L L+ LD L IH PQ I + P + DH C* +++L+AK++YHHQAQ + *S Q+ +Q M Q S T P T+KMS+Q CE C W * EP +SQ WS *C*+P * IP LD S Subject 3044 HGA*CKIRQSSHSRHKHSLPVVCEWLELRGLDLLGIHSPQKIEYQPLRQDHQC*VKNRLNAKNNYHHQAQRRY*SHQYHNQHMLQSGSLATPPWTRKMSIQFCEPSICRWT*PEPYMLSQKWSLPPFS*C*SPL*IP*KIPEPLDHS 3484
Range 9: 3527 to 3685 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
58.8 bits(122) | 0.0 | 28/53(53%) | 0/53(0%) | Minus/Minus |
Query 598 CWAYISN*ARLPHAFQVLMQ*L*SCSH*EGHKVENDWTLNTEFHIEAIHSPQT 756 CWA N AR HA +L Q L*SC+H G V +D + EFHI A HSPQT Subject 3527 CWACTDNSARQLHASPMLKQWL*SCNHSVGRMVGSDLI*DKEFHIGATHSPQT 3685
Range 10: 3284 to 3598 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
86.8 bits(183) | 0.0 | 50/105(48%) | 0/105(0%) | Plus/Plus |
Query 355 VMVTAFGTQLAFFLAQMV*L*RQE*DRLWKVNHQLIQLFQAQLYGSNLVKTLMQKMK*LPYSVLGIM*D*SL*RQNMK*AGSLGRMNGLYVEFCV*SPIIFNLVP 669 VMV FG Q F+ A MV *R D LW+VN +Q Q Q + +N + M +M+*LPY LG M* * QNMK GSLGR++G YVEF V + I N P Subject 3284 VMVIVFGIQSVFYSALMVLP*RLVFDLLWRVNA**VQASQLQPFTNNWERMFMPRMR*LPYFALGTM*G***SHQNMKSVGSLGRVSGPYVEFFVLNQITSNHAP 3598
Range 11: 2964 to 3281 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
70.7 bits(148) | 0.0 | 45/106(42%) | 0/106(0%) | Plus/Plus |
Query 35 PVTSSGHAKKQETVNPCS*RGPFFRN*LRSKNLGII*SF*GGF*H*KDRR*LHICDILQGSSQIHRQAKSSQICMLIFWVKGAVIGLSN*GIS*L*N*RLQHFSCA 352 P+ S +A +QE ++P S*R + L SK GI * G H ++ LH CD + GS +HRQ + SQ MLIF V+G V L +* + *L* * LQ+ CA Subject 2964 PI*SFRNAPEQEAIHPSS*RCLISGDRLWSKGSGIF*GIQRGLQHQENGGRLHFCDNI*GSG*VHRQIEGSQN*MLIFRVQGGVARLPD*SMC*L*Y**LQYLLCA 3281
Grapevine rupestris stem pitting associated virus isolate TEMP BR replicase, 24.4 kDa protein, 12.8 kDa protein, 8.4 kDa protein, and 28 kDa protein genes, complete cds
Sequence ID: KX925556.1 Length: 8700 Number of Matches: 11
Range 1: 2945 to 3673 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
522.5 bits(1134) | 0.0 | 210/243(86%) | 0/243(0%) | Plus/Plus |
Query 27 GTGLSQVLAMPRSKKQSILVLEGALSLETDYGPKILGSFEVFKGDFNIKKIEDSSIFVISYRAPVRSTGKLRVHKSACSFSGSRELLLDCQIEASADFEIEDFNTFPVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESESPVDPALSSPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPS 755 G GLS+VL MPRSKKQSILVLEGALS+ETD+GPK+LGSFEVFKGDFNIKK+E+ SIFVISY+APVRSTGKLRVHKS CSFSGS+E+LL CQIEA AD++I+DFNTF VPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESE V LS+PT+ KQL ENAYAENEMIALFC+RHHVRLI++TPEYEVSWKFGE+EWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVD+LNYLCRPS Subject 2945 GPGLSKVLEMPRSKKQSILVLEGALSIETDFGPKVLGSFEVFKGDFNIKKMEEGSIFVISYKAPVRSTGKLRVHKSECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESERLVSSDLSAPTVSKQLEENAYAENEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDILNYLCRPS 3673
Range 2: 3253 to 3672 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
203.1 bits(437) | 0.0 | 102/140(73%) | 0/140(0%) | Minus/Minus |
Query 335 LGLHK*LSTSTSRLPSADAIAVIMQPLRGAQG*K*LDFKHRIPHRGHSFSPNFQLTSYSGVIMISLT*CLTQNKXXXXXXXXXXSPSCFRIVGLERAGSTGDSLSTNDLIPAFKARPSVLRRKPTECQKQLPSPGTGKVL 754 LGLH+* STSRLPSA+A+AVIMQP GA G K*LDF+ RIPHRGHS SPNFQLTSYSGV ISLT C QN AIISFSA*AFS +C VG ER+ T SLST D +PAF+A+PSVL +KPTECQKQLPSPGT KVL Subject 3253 LGLHR*FKISTSRLPSAEAMAVIMQPFSGAHGWK*LDFRQRIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQNNAIISFSA*AFSSNCLETVGAERSELTRRSLSTKDRMPAFRAKPSVLSKKPTECQKQLPSPGTEKVL 3672
Range 3: 2944 to 3207 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
156.4 bits(335) | 0.0 | 67/88(76%) | 0/88(0%) | Minus/Minus |
Query 26 NNSSLDPENEHADL*TLSLPVDLTGAL*DITNMELSSIFLMLKSPLKTSNDPKIFGP*SVSKERAPSRTRIDCFLLLGMARTCDRPVP 289 +N+SLDPENEH+DL*TL+LPVDLTGAL DIT ME SSIFLMLKSPLKTS DP+ GP SVS +RAPSRT+IDCFLL G+++T DRP P Subject 2944 SNTSLDPENEHSDL*TLNLPVDLTGALYDITKMEPSSIFLMLKSPLKTSKDPRTLGPKSVSIDRAPSRTKIDCFLLRGISKTLDRPGP 3207
Range 4: 3320 to 3673 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.4 bits(239) | 0.0 | 56/118(47%) | 0/118(0%) | Minus/Minus |
Query 402 AGPT*VIEHVYLTPSKC*CNSCNHAAIKRGTRLKMIGL*TQNST*RPFILPKLPAHFIFWRYNDQSHMMPNTE*GNHFIFCISVFTKLLPYSWA*KSWINW*FTFHKRSYSCLQS*TI 755 A T +I ++ TP K * N +HA I+ G L++IGL +NST* P PK P +FIFW Y QS+M+P+TE NH I IS+F +L W+*K N T HKRS + LQS*T+ Subject 3320 ARSTQII*NINFTPPKR*GNGRDHATIQWGAWLEVIGLQAKNST*GPLTFPKFPTNFIFWCYYYQSYMVPDTEQCNHLILSISIFFQLFRNGWS*KI*TN*ALTLHKRSNASLQS*TV 3673
Range 5: 2972 to 3277 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
103.7 bits(220) | 0.0 | 50/102(49%) | 0/102(0%) | Minus/Minus |
Query 54 ITRHRKSVEVFNFKVS*CLNLTVQ*QLP*PRK*ACRFVNS*LACGSDWSPVRYHKYGAIFYLFNVKIPLKNFK*SQDFWTVVSF*RKGPFKNKD*LFLASWH 359 +TR+R+S+++ N +S CL L L P K*A FVN * GS+W V YHK GA+ + F+V++PL+NFK Q+F T V F R G KN+D*LF AS H Subject 2972 VTRYRESIKIINIIISTCLYLAT*QYLLGPGK*AL*FVNP*FTGGSNWGLV*YHKNGALLHFFDVEVPLENFKGPQNFRTKVCFDR*GTLKNQD*LFFASGH 3277
Range 6: 3334 to 3639 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
113.8 bits(242) | 0.0 | 51/102(50%) | 0/102(0%) | Plus/Plus |
Query 416 EGRNKIVCGK*ITS*SSSFKPNYTEATW*KRLCRK*NDCLILC*ASCETDHYNARI*SELEVWGE*MASMWNSVFKVQSFSTLCPS*WLHDYSYCISTWKA* 721 EG + I CG+* S* SF N K LC +*+DC++L A C+TD N RI*S LE+WG+*+A MWNS+ +VQS T+ P+ WLHD+ +C+S W+A* Subject 3334 EGWHSIFCGE*APS*FRSFSSNRF*TIGRKCLC*E*DDCIVLYPAPCKTDSSNTRI*S*LEIWGK*VAPMWNSLPEVQSLPTMRPTEWLHDHGHCLSAWEA* 3639
Range 7: 2971 to 3267 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
85.4 bits(180) | 0.0 | 49/99(49%) | 0/99(0%) | Plus/Plus |
Query 53 HAKKQETVNPCS*RGPFFRN*LRSKNLGII*SF*GGF*H*KDRR*LHICDILQGSSQIHRQAKSSQICMLIFWVKGAVIGLSN*GIS*L*N*RLQHFSC 349 +A KQ+TVN S* P +RN L S + G++*SF GG H K+ LH CDI+QG S IHR K SQI +LIF V+G + L + G+ *L* * +F C Subject 2971 NAPKQKTVNLGS*GCPIYRNRLWS*SSGVL*SFQGGLQHQKNGGGLHFCDIIQGPS*IHR*IKGSQIRVLIFRVQGGIARLPDRGMC*L*Y**F*YFLC 3267
Range 8: 2961 to 3473 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
140.8 bits(301) | 0.0 | 80/171(47%) | 0/171(0%) | Minus/Minus |
Query 43 HDA*HRIRQSFHFLHKRFHQVASV*LGLKELDQLVIHFPQTILFLPSKLDHLC*EESQLSAKSSYHHQAQEKC*SLQFQSQLMPQFDSPITAPLTQKMSMQICELLACLWI*LEPCKISQIWSYLLSF*C*NPP*KLQMIPRFLDRSQFLKKGPLQEQGLTVSCFLAWPEL 555 H A +R QS H HK F + L LK+L+ L H PQ I PS+L+ * +QL+AKS+ HQ Q K *+ Q+ +Q MP + P T+KMS ICE L WI*L PC ISQ WS F*C*+PP*KLQ P D+S F G QE LTV CF A+ +L Subject 2961 HGAGYRTMQSSHSQHKHFLPIV*KRLELKDLN*LGAHSPQKIECQPSELNRQY*VRNQLNAKSNCRHQVQRKY*NHQYHNQHMPLSGNLAIPPWTRKMSTLICEPLIYRWI*LGPCMISQKWSPPPFF*C*SPP*KLQRTPEL*DQSLFR*IGHPQEPRLTVFCFGAFLKL 3473
Range 9: 3519 to 3674 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.9 bits(107) | 0.0 | 25/52(48%) | 0/52(0%) | Minus/Minus |
Query 601 CWAYISN*ARLPHAFQVLMQ*L*SCSH*EGHKVENDWTLNTEFHIEAIHSPQ 756 C Y N HA Q L Q *SC+H G V +DWT EFHI A H PQ Subject 3519 C*VYTDNLKYQLHASQALRQWP*SCNHSVGRMVGSDWTSGKEFHIGATHFPQ 3674
Range 10: 3273 to 3587 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
94.5 bits(200) | 0.0 | 53/105(50%) | 0/105(0%) | Plus/Plus |
Query 355 VMVTAFGTQLAFFLAQMV*L*RQE*DRLWKVNHQLIQLFQAQLYGSNLVKTLMQKMK*LPYSVLGIM*D*SL*RQNMK*AGSLGRMNGLYVEFCV*SPIIFNLVP 669 V AFG QL + V*L*R D LW+V+ L+Q+FQ Q + +N K LM +M+*L SV G M*D* * QNMK G+LG+++G YVEF *SPI N P Subject 3273 VTAIAFGIQLVSYSVLTV*L*RLAFDLLWRVSA*LVQIFQLQPFLNNWKKMLMLRMR*LHCSVSGTM*D****HQNMKLVGNLGKVSGPYVEFFA*SPITSNHAP 3587
Range 11: 2961 to 3191 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
85.4 bits(180) | 0.0 | 42/77(55%) | 0/77(0%) | Plus/Plus |
Query 43 KFWPCQEARNSQSLFLKGPFL*KLTTVQKSWDHLKFLRGILTLKR*KIAPYL*YLTGLQSDPQAS*EFTNLHAHFLG 273 KF C EA+NSQS FL+ P+L K T V K W LKF RG T K+ + AP+L*Y T Q DP +* FTN AHF G Subject 2961 KF*KCPEAKNSQSWFLRVPYLSKQTLVLKFWGPLKFSRGTSTSKKWRRAPFL*YHTRPQLDPPVN*GFTNQSAHFPG 3191
Nucleotide Sequence (159 letters)
Query ID: | ds2016-133_14 |
Query definition: | No definition line |
Query length: | 603 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
111.0 | 404.0 | 48% | 8.862e-24 | 72% | AB277783.1 | |
112.0 | 434.4 | 47% | 4.687e-24 | 76% | AY368590.1 | |
110.1 | 424.7 | 48% | 1.67e-23 | 72% | KX274275.1 | |
106.5 | 160.2 | 33% | 2.123e-22 | 50% | AY881626.1 | |
106.5 | 158.4 | 33% | 2.123e-22 | 48% | JX559646.1 |
Alignments
Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OB1
Sequence ID: AB277783.1 Length: 2876 Number of Matches: 5
Range 1: 830 to 985 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
111.0 bits(236) | 0.0 | 47/52(90%) | 0/52(0%) | Plus/Plus |
Query 2 IMNNLVKALSTFEFVGVYSELRFPVVVHSVPGSGKRSLIRELITEDESFTAF 157 IMNNLVKALSTFEFVG+YS LRFPVVVHSVPGSGK SLIREL+TEDESF AF Subject 830 IMNNLVKALSTFEFVGIYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAF 985
Range 2: 830 to 985 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
94.5 bits(200) | 0.0 | 39/52(75%) | 0/52(0%) | Minus/Minus |
Query 2 EGCETLVLSDELSYQTSFTATRNTMNDNWKSELTIDTHKLKRRQSFN*VIHN 157 +G ETLVLSD+ SY T+FT TRN +N+NWKSE I+THKLKRRQSFN*VIHN Subject 830 KGYETLVLSDKFSY*TAFTTTRNAVNNNWKSEHAINTHKLKRRQSFN*VIHN 985
Range 3: 831 to 986 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
83.5 bits(176) | 0.0 | 41/52(79%) | 0/52(0%) | Minus/Minus |
Query 3 *RL*NSRPQ**ALLSNFFYRYQEHYERQLEI*AHYRHPQTQT*TKL*LSYS* 158 *RL*NSRPQ* LL N FY YQE E+QLEI*A Y++PQTQT*TKL*LSYS* Subject 831 *RL*NSRPQ*QVLLLNCFYHYQERCEQQLEI*ARYKYPQTQT*TKL*LSYS* 986
Range 4: 829 to 987 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
68.0 bits(142) | 0.0 | 42/53(79%) | 0/53(0%) | Plus/Plus |
Query 1 YYE*LS*SFVYV*VCGCL**AQIXXXXXXXXXXX*KKFDKRAHH*GREFHSLH 159 YYE*LS*SFVYV*VCG L* AQISSC S SW* *K+F+KR H*GREFHSL+ Subject 829 YYE*LS*SFVYV*VCGYL*RAQISSCCSQRSW*W*KQFNKRTCH*GREFHSLY 987
Rupestris stem pitting associated virus strain Syrah, complete genome
Sequence ID: AY368590.1 Length: 8742 Number of Matches: 6
Range 1: 6574 to 6729 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.0 bits(238) | 0.0 | 49/52(94%) | 0/52(0%) | Plus/Plus |
Query 2 IMNNLVKALSTFEFVGVYSELRFPVVVHSVPGSGKRSLIRELITEDESFTAF 157 IMNNLVKALSTFEFVGVYS LRFPVVVHSVPGSGK SLIRELITEDESF AF Subject 6574 IMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAF 6729
Range 2: 6574 to 6729 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
99.1 bits(210) | 0.0 | 41/52(79%) | 0/52(0%) | Minus/Minus |
Query 2 EGCETLVLSDELSYQTSFTATRNTMNDNWKSELTIDTHKLKRRQSFN*VIHN 157 E ETLV S+ELSYQT+FT TRN MN+NWKSE I+THKLKRRQSFN*VIHN Subject 6574 ESYETLVFSNELSYQTTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHN 6729
Range 3: 6575 to 6730 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
93.6 bits(198) | 0.0 | 44/52(85%) | 0/52(0%) | Minus/Minus |
Query 3 *RL*NSRPQ**ALLSNFFYRYQEHYERQLEI*AHYRHPQTQT*TKL*LSYS* 158 *+L*NSR Q**ALLSN+FY YQE YE+QLEI*A Y+HPQTQT*TKL*LSYS* Subject 6575 *KL*NSRLQ**ALLSNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS* 6730
Range 4: 6573 to 6641 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
47.3 bits(97) | 0.0 | 22/23(96%) | 0/23(0%) | Plus/Plus |
Query 1 YYE*LS*SFVYV*VCGCL**AQI 69 YYE*LS*SFVYV*VCGCL* AQI Subject 6573 YYE*LS*SFVYV*VCGCL*RAQI 6641
Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome
Sequence ID: KX274275.1 Length: 8724 Number of Matches: 6
Range 1: 6574 to 6729 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
110.1 bits(234) | 0.0 | 47/52(90%) | 0/52(0%) | Plus/Plus |
Query 2 IMNNLVKALSTFEFVGVYSELRFPVVVHSVPGSGKRSLIRELITEDESFTAF 157 IMNNLVKALSTFEFVGVYS LRFPVVVHSVPGSGK SLIREL+TEDE+F AF Subject 6574 IMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELVTEDENFIAF 6729
Range 2: 6574 to 6729 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
93.6 bits(198) | 0.0 | 39/52(75%) | 0/52(0%) | Minus/Minus |
Query 2 EGCETLVLSDELSYQTSFTATRNTMNDNWKSELTIDTHKLKRRQSFN*VIHN 157 +G E LVLSD+ SY T+FT TRN MN+NWKSE I+THKLKRRQSFN*VIHN Subject 6574 KGYEILVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHN 6729
Range 3: 6575 to 6730 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
92.7 bits(196) | 0.0 | 43/52(83%) | 0/52(0%) | Minus/Minus |
Query 3 *RL*NSRPQ**ALLSNFFYRYQEHYERQLEI*AHYRHPQTQT*TKL*LSYS* 158 *RL*NSRPQ* LL N+FY YQE YE+QLEI*A Y+HPQTQT*TKL*LSYS* Subject 6575 *RL*NSRPQ*QVLLLNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS* 6730
Range 4: 6573 to 6641 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
47.3 bits(97) | 0.0 | 22/23(96%) | 0/23(0%) | Plus/Plus |
Query 1 YYE*LS*SFVYV*VCGCL**AQI 69 YYE*LS*SFVYV*VCGCL* AQI Subject 6573 YYE*LS*SFVYV*VCGCL*RAQI 6641
Rupestris stem pitting associated virus strain SG1, complete genome
Sequence ID: AY881626.1 Length: 8742 Number of Matches: 2
Range 1: 6574 to 6729 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.5 bits(226) | 0.0 | 44/52(85%) | 0/52(0%) | Plus/Plus |
Query 2 IMNNLVKALSTFEFVGVYSELRFPVVVHSVPGSGKRSLIRELITEDESFTAF 157 IMNNLVKALSTFEF+GV+S L+FPVV+HSVPGSGK SLIRELI+EDESF AF Subject 6574 IMNNLVKALSTFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAF 6729
Range 2: 6574 to 6729 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.8 bits(111) | 0.0 | 26/52(50%) | 0/52(0%) | Minus/Minus |
Query 2 EGCETLVLSDELSYQTSFTATRNTMNDNWKSELTIDTHKLKRRQSFN*VIHN 157 E ETLVL D L Y T+ T R TM ++WK + T +T+KL+ Q FN +IHN Subject 6574 ESHETLVL*D*LPY*TTLTTARYTMYNDWKFKHTENTYKLEG*QCFNQIIHN 6729
Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome
Sequence ID: JX559646.1 Length: 8726 Number of Matches: 2
Range 1: 6574 to 6729 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
106.5 bits(226) | 0.0 | 44/52(85%) | 0/52(0%) | Plus/Plus |
Query 2 IMNNLVKALSTFEFVGVYSELRFPVVVHSVPGSGKRSLIRELITEDESFTAF 157 IMNNLVKALSTFEF+GV+S L+FPVV+HSVPGSGK SLIRELI+EDESF AF Subject 6574 IMNNLVKALSTFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISEDESFVAF 6729
Range 2: 6574 to 6729 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.9 bits(107) | 0.0 | 25/52(48%) | 0/52(0%) | Minus/Minus |
Query 2 EGCETLVLSDELSYQTSFTATRNTMNDNWKSELTIDTHKLKRRQSFN*VIHN 157 E ETLVL D L Y T+ T R TM ++WK + T +T+K + Q FN +IHN Subject 6574 ESHETLVL*D*LPY*TTLTTARYTMYNDWKFKHTENTYKFEG*QCFNQIIHN 6729
Nucleotide Sequence (955 letters)
Query ID: | ds2016-133_14 |
Query definition: | No definition line |
Query length: | 603 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
766.3 | 4135.9 | 32% | 0 | 93% | KX274277.1 | |
762.2 | 4157.9 | 32% | 0 | 95% | AY881627.1 | |
733.3 | 3054.6 | 28% | 0 | 65% | KX925556.1 | |
732.8 | 3144.1 | 30% | 0 | 50% | FR691076.1 | |
732.8 | 3063.7 | 29% | 0 | 62% | KX274276.1 |
Alignments
Grapevine rupestris stem pitting associated virus isolate SK30, complete genome
Sequence ID: KX274277.1 Length: 8724 Number of Matches: 7
Range 1: 3064 to 4014 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
766.3 bits(1666) | 0.0 | 314/317(99%) | 0/317(0%) | Minus/Plus |
Query 3 GSFEVFKGDFNIKKMEEGSIFVITYKAPVRSTGKLRVHKTECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLGTDGLALKAGIRSFVESECLVSPNLSAPTIHKQLGENVYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCKPSTYHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGSGPQSIKVDELRKVKRSALDFLSMNGSKITYFPNFERAEKLQGSL 953 GSFEVFKGDFNIKKMEEGSIFVITYKAPVRSTGKLRVHKTECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLL TDGLALKAGIRSFVESECLVSPNLSAPTIHKQLGENVYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCKPST HIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGSGPQSIKVDELRKVKRSALDFLSMNGSKITYFPNFERAEKLQG L Subject 3064 GSFEVFKGDFNIKKMEEGSIFVITYKAPVRSTGKLRVHKTECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESECLVSPNLSAPTIHKQLGENVYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCKPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGSGPQSIKVDELRKVKRSALDFLSMNGSKITYFPNFERAEKLQGCL 4014
Range 2: 3119 to 4015 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
688.8 bits(1497) | 0.0 | 282/299(94%) | 0/299(0%) | Plus/Minus |
Query 2 ANSLAIFQPAQSLGSRLSWTHSLTENQERIA*PSATHPLLCSEGHFQSSQHALCVH*LCQIRQKSCH*G*SPQFHHLCHTWRKCQKLQRLQPSTSY*GRLLGTTPQKCDRCWACTGNSARQLHASPMLKQWL*SCNHSVGRMVGSDLI*DKEFHIGATHSPQTSN*LHILV*SLSASHGA*CKIRQSSHSRHKHSLPIVCEWLELRGLDLLGIHFPQKI*YQPLRQDHQCRAKNQLNAKNNYHHQAQRRY*SHQYHNQHMLQSGSLATPPWTRKMSIQFCEPSICQLT*LEPYMLSQKW 898 AN LAIFQPAQSLGSRLSWTHSLTENQERIA*PSA HPLLCSE HFQ SQHALCVH*LCQIRQKSCH*G*SPQFHHLCHTWRKCQKLQRLQPSTSY*GRLLGTTP+KCD CWACT NSARQLHASPMLKQWL*SCNHSVGRMVGSDLI*DKEFHIGATHSPQTSN*LHILV*SLSASHGA*CKIRQSSHSRHKHSLPIVCEWLELRGLDLLGIH PQKI YQPLRQDHQC KN+LNAKNNYHHQAQRRY*+HQYHNQHMLQSGSLATPPWTRKMSIQFC PSIC+ *LEPYMLSQKW Subject 3119 ANILAIFQPAQSLGSRLSWTHSLTENQERIA*PSAIHPLLCSEDHFQFSQHALCVH*LCQIRQKSCH*G*SPQFHHLCHTWRKCQKLQRLQPSTSY*GRLLGTTPRKCDWCWACTDNSARQLHASPMLKQWL*SCNHSVGRMVGSDLI*DKEFHIGATHSPQTSN*LHILV*SLSASHGA*CKIRQSSHSRHKHSLPIVCEWLELRGLDLLGIHSPQKIEYQPLRQDHQC*VKNRLNAKNNYHHQAQRRY*NHQYHNQHMLQSGSLATPPWTRKMSIQFCGPSICRWI*LEPYMLSQKW 4015
Range 3: 3064 to 4014 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
688.8 bits(1497) | 0.0 | 302/317(95%) | 0/317(0%) | Plus/Minus |
Query 3 QTPLQFFSPLKVWEVGYLGPIH*QKIKSGSLDLPQLIHFYALRATSNLLNMPYVFISYVK*GRNLAIRVNHLNFTIYVTLGANVKSFKGFSQVHHIKAASLAQLLKNVIGAGLAQVIQHVNFTPPQC*SNGCDHATIQWGAWLEVI*FKTKNSXXXXXXXXXXXXDFIFWCDHYQPHMVPNAK*GNHLILGINILSQLFVNGWS*EVWTY*AFTFHKRSNTSL*GKTISAEQKTN*MPKTITITRHREGIEVINIIISTCFNLAA*QHLLGPGK*AFSFVNPQFAS*PNWSLICYHKNGAFLHFLDVEVPFEYLKRS 953 QT LQFFSPLKVWEVGYLGPIH*QKIKSGSLDLPQ IHFYALR TSN LNMPYVFISYVK*GRNLAIRVNHLNFTIYVTLGANVKSFKGFSQVHHI+AASLAQLL+NVIGAGLAQ+IQHVNFTPPQC*SNGCDHATIQWGAWLEVI*FKTKNST*GPLTLPKLPTDFIFWCDHYQPHMVPNAK*GNHLILGINILSQLFVNGWS*EVWTY*AFT HKRSNTSL*GKTISAE KT+*MPKTITITRHREGIE+INIIISTCFNLAA*QHLLGPGK*AFSFV+PQFA NWSLICYHKNGAFLHFLDVEVPFEYLKRS Subject 3064 QTSLQFFSPLKVWEVGYLGPIH*QKIKSGSLDLPQFIHFYALRTTSNFLNMPYVFISYVK*GRNLAIRVNHLNFTIYVTLGANVKSFKGFSQVHHIEAASLAQLLENVIGAGLAQIIQHVNFTPPQC*SNGCDHATIQWGAWLEVI*FKTKNST*GPLTLPKLPTDFIFWCDHYQPHMVPNAK*GNHLILGINILSQLFVNGWS*EVWTY*AFTLHKRSNTSL*GKTISAE*KTD*MPKTITITRHREGIEIINIIISTCFNLAA*QHLLGPGK*AFSFVDPQFAGGSNWSLICYHKNGAFLHFLDVEVPFEYLKRS 4014
Range 4: 3062 to 4015 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
685.6 bits(1490) | 0.0 | 302/318(95%) | 0/318(0%) | Minus/Plus |
Query 2 WDLLRYSKGTSTSRKWRKAPFL**HIRLQLGQLAN*GFTKLNAHFPGPRRCC*AARLKHVLIMILMTSIPSLCLVMVIVFGIQLVFCSALMVLP*RLVLDLLWKVNA**VQTSQLQPFTNNWERMFMPRMR*LPYFALGTM*G***SHQNMKSVGSLGRVSGPYVEFFVLNQITSNHAPH*MVA*SQPLLQHWGGVKLTC*ITCASPAPITFLRSCAKEAALI*CTWLKPLKLLTFAPSVT*MVKLR*LTLMARFLPYLT*LMNT*GMLRRLEVALRA*KWMSCGRSSDPLLIFCQ*MGPR*PTSQTLSGLKNCKGVC 955 WDLLRYSKGTSTSRKWRKAPFL**HIRLQL AN*G TKLNAHFPGPRRCC*AARLKHVLIMILM SIPSLCLVMVIVFGIQ VF SALMVLP*RLV DLLW+VNA**VQTSQLQPFTNNWERMFMPRMR*LPYFALGTM*G***SHQNMKSVGSLGRVSGPYVEFFVLNQITSNHAPH*MVA*SQPLLQHWGGVKLTC*I CASPAPITF RSCAKEAA I*CTWLKPLKLLTFAPSVT*MVKLR*LTLMARFLPYLT*LMNT*GMLR+LEV LRA*KWM+CGRSSDPLLIFCQ*MGPR*PTSQTLSGLKNCK VC Subject 3062 WDLLRYSKGTSTSRKWRKAPFL**HIRLQLDPPAN*GSTKLNAHFPGPRRCC*AARLKHVLIMILMISIPSLCLVMVIVFGIQSVFYSALMVLP*RLVFDLLWRVNA**VQTSQLQPFTNNWERMFMPRMR*LPYFALGTM*G***SHQNMKSVGSLGRVSGPYVEFFVLNQITSNHAPH*MVA*SQPLLQHWGGVKLTC*IICASPAPITFSRSCAKEAASI*CTWLKPLKLLTFAPSVT*MVKLR*LTLMARFLPYLT*LMNT*GMLRKLEVVLRA*KWMNCGRSSDPLLIFCQ*MGPR*PTSQTLSGLKNCKDVC 4015
Range 5: 3063 to 4016 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
672.3 bits(1461) | 0.0 | 313/318(98%) | 0/318(0%) | Plus/Minus |
Query 1 SKLPCNFSARSKFGK*VILDPFIDRKSRADRLTFRNSSTFML*GPLPIFSTCLMCSLVMSNKAEILPLGLITSISPFMSHLAQMXXXXXXXXXYIILRPPPWHNSSKM**VLGLHR*FSTSTSRLPNAEAMAVIMQPFSGAHGWK*FDLRQRIPHRGHSLSPNFQLTSYSGVITISLTWCLMQNKAIISFSA*TFSPNCL*MVGAERFGLTRHSLSTKDLIPAFKARPSVPSKKPTECQKQLPSPGTEKVLKXXXXXXXXXXXWQPSNTSLDPENEHSVL*TLNLPVDLTGALYVITKMEPSSIFLMLKSPLNTSKDP 954 SK PCNFSARSKFGK*VILDPFIDRKSRADRLTFRNSSTFML*GPLPIFSTCLMCSLVMSNKAEILPLGLITSISPFMSHLAQMSKASKASAKYIILRPPPWHNSSKM* VLGLHR*FSTSTSRLPNAEAMAVIMQPFSGAHGWK*FDLRQRIPHRGHSLSPNFQLTSYSGVITISLTWCLMQNKAIISFSA*TFSPNCL*MVGAERFGLTRHSLSTKD IPAFKARPSV SKKPTECQKQLPSPGTEKVLKSSIS*SAHASIWQPSNTSLDPENEHSVL TLNLPVDLTGALYVITKMEPSSIFLMLKSPLNTSKDP Subject 3063 SKHPCNFSARSKFGK*VILDPFIDRKSRADRLTFRNSSTFML*GPLPIFSTCLMCSLVMSNKAEILPLGLITSISPFMSHLAQMSKASKASAKYIILRPPPWHNSSKM*LVLGLHR*FSTSTSRLPNAEAMAVIMQPFSGAHGWK*FDLRQRIPHRGHSLSPNFQLTSYSGVITISLTWCLMQNKAIISFSA*TFSPNCL*MVGAERFGLTRHSLSTKDRIPAFKARPSVLSKKPTECQKQLPSPGTEKVLKSSIS*SAHASIWQPSNTSLDPENEHSVLWTLNLPVDLTGALYVITKMEPSSIFLMLKSPLNTSKDP 4016
Range 6: 3324 to 4016 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
483.6 bits(1049) | 0.0 | 220/231(95%) | 0/231(0%) | Minus/Plus |
Query 1 RH*WSCLKGWY*IFCGXXXXXXXXXXXSNHSQTIGRECLCRE*DDCLILH*APCEADSDHTRI*SQLEVWGE*VAPMWNSLS*IKSLPTMRPTEWLHDHSHCFSIGEA*S*RAELPVQAQHLSHF*GVVPRRRP*YDVLG*SL*SF*HLRQV*HKW*N*GD*P*WQDFCLI*HN**THKAC*EDWKWPSEHKSG*VAEGQAIRS*FSVNEWVQDNLLPKL*AG*KIAREFA 693 +H*WSCLKGWY IFCG+*MPSKSKPLSSNHSQTIGRECLCRE*DDCLILH*APCEADSDHTRI*SQLEVWGE*VAPMWNSLS*IKSLPTMRPTEWLHDHSHCFSIGEA*S*RAEL VQAQH SHF GVVPRRRP YDVLG*SL*SF*HLRQV*HKW*N*GD*P*WQDFCLI*HN**THKAC*E+WKW SEHKSG*+AEGQAIRS*FSVNEWVQDNLLPKL*AG*KIAR FA Subject 3324 QH*WSCLKGWYSIFCGE*MPSKSKPLSSNHSQTIGRECLCRE*DDCLILH*APCEADSDHTRI*SQLEVWGE*VAPMWNSLS*IKSLPTMRPTEWLHDHSHCFSIGEA*S*RAELSVQAQHQSHFRGVVPRRRPQYDVLG*SL*SF*HLRQV*HKW*N*GD*P*WQDFCLI*HN**THKAC*ENWKWSSEHKSG*IAEGQAIRS*FSVNEWVQDNLLPKL*AG*KIARMFA 4016
Range 7: 3063 to 3278 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
150.4 bits(322) | 0.0 | 67/72(93%) | 0/72(0%) | Minus/Plus |
Query 739 GIF*GIQRGLQHQENGGRLHFCDNI*GSS*VNWQIEGSQN*MLIFRVQGGVARLPD*SMC*L*Y**LQYLLC 954 GIF*GIQRGLQHQENGGRLHFCDNI*GSS*++ QIEG QN*MLIFRVQGGVARLPD*SMC*L*Y** QYLLC Subject 3063 GIF*GIQRGLQHQENGGRLHFCDNI*GSS*IHRQIEGPQN*MLIFRVQGGVARLPD*SMC*L*Y**FQYLLC 3278
Rupestris stem pitting associated virus strain BS, complete genome
Sequence ID: AY881627.1 Length: 8743 Number of Matches: 7
Range 1: 3064 to 4014 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
762.2 bits(1657) | 0.0 | 312/317(98%) | 0/317(0%) | Minus/Plus |
Query 3 GSFEVFKGDFNIKKMEEGSIFVITYKAPVRSTGKLRVHKTECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLGTDGLALKAGIRSFVESECLVSPNLSAPTIHKQLGENVYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCKPSTYHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGSGPQSIKVDELRKVKRSALDFLSMNGSKITYFPNFERAEKLQGSL 953 GSF+VFKGDFNIKKMEEGSIFVITYKAPVRSTGKLRVHKTECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLL TDGLALKAGIRSFVESECLVSP+LSAPTIHKQLGENVYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCKPST HIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGSGPQSIKVDELRKVKRSALDFLSMNGSKITYFPNFERAEKLQG L Subject 3064 GSFKVFKGDFNIKKMEEGSIFVITYKAPVRSTGKLRVHKTECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESECLVSPSLSAPTIHKQLGENVYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCKPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGSGPQSIKVDELRKVKRSALDFLSMNGSKITYFPNFERAEKLQGCL 4014
Range 2: 3062 to 4015 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
698.0 bits(1517) | 0.0 | 306/318(96%) | 0/318(0%) | Minus/Plus |
Query 2 WDLLRYSKGTSTSRKWRKAPFL**HIRLQLGQLAN*GFTKLNAHFPGPRRCC*AARLKHVLIMILMTSIPSLCLVMVIVFGIQLVFCSALMVLP*RLVLDLLWKVNA**VQTSQLQPFTNNWERMFMPRMR*LPYFALGTM*G***SHQNMKSVGSLGRVSGPYVEFFVLNQITSNHAPH*MVA*SQPLLQHWGGVKLTC*ITCASPAPITFLRSCAKEAALI*CTWLKPLKLLTFAPSVT*MVKLR*LTLMARFLPYLT*LMNT*GMLRRLEVALRA*KWMSCGRSSDPLLIFCQ*MGPR*PTSQTLSGLKNCKGVC 955 WDLLRYSKGTSTSRKWRKAPFL**HIRL+LG AN*GFTKLNAHFPGPRRCC*AARLKHVLIMILMTSIPSLCLVMVIVFGIQ VF SALMVLP*RLV DLLW+VNA**VQ SQLQPFTNNWERMFMPRMR*LPYFALGTM*G***SHQNMKSVGSLGRVSGPYVEFFVLNQITSNHAPH*MVA*SQPLLQHWGGVKLTC*I CASPAPITFLRSCAKEAALI*CTWLKPLKLLTFAPSVT*MVKLR*LTLMARFLPYLT*LMNT*GMLRRLEV LRA*KWM+CGRSSDPLLIFCQ*MGPR*PTSQTLSGLKNCK VC Subject 3062 WDLLRYSKGTSTSRKWRKAPFL**HIRLRLGPPAN*GFTKLNAHFPGPRRCC*AARLKHVLIMILMTSIPSLCLVMVIVFGIQSVFYSALMVLP*RLVFDLLWRVNA**VQASQLQPFTNNWERMFMPRMR*LPYFALGTM*G***SHQNMKSVGSLGRVSGPYVEFFVLNQITSNHAPH*MVA*SQPLLQHWGGVKLTC*IICASPAPITFLRSCAKEAALI*CTWLKPLKLLTFAPSVT*MVKLR*LTLMARFLPYLT*LMNT*GMLRRLEVVLRA*KWMNCGRSSDPLLIFCQ*MGPR*PTSQTLSGLKNCKDVC 4015
Range 3: 3119 to 4015 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
697.1 bits(1515) | 0.0 | 285/299(95%) | 0/299(0%) | Plus/Minus |
Query 2 ANSLAIFQPAQSLGSRLSWTHSLTENQERIA*PSATHPLLCSEGHFQSSQHALCVH*LCQIRQKSCH*G*SPQFHHLCHTWRKCQKLQRLQPSTSY*GRLLGTTPQKCDRCWACTGNSARQLHASPMLKQWL*SCNHSVGRMVGSDLI*DKEFHIGATHSPQTSN*LHILV*SLSASHGA*CKIRQSSHSRHKHSLPIVCEWLELRGLDLLGIHFPQKI*YQPLRQDHQCRAKNQLNAKNNYHHQAQRRY*SHQYHNQHMLQSGSLATPPWTRKMSIQFCEPSICQLT*LEPYMLSQKW 898 AN LAIFQPAQSLGSRLSWTHSLTENQERIA*PSA HPLLCSE HFQSSQHALCVH*LCQIRQKSCH*G*SPQFHHLCHTWRKCQKLQRLQPSTSY*GRLLGTTPQKCD CWACT NSARQLHASPMLKQWL*SCNHSVGRMVGSDLI*DKEFHIGATHSPQTSN*LHILV*SLSASHGA*CKIRQSSHSRHKHSLP+VCEWLELRGLDLLGIH PQKI YQPLRQDHQC KN+LNAKNNYHHQAQRRY*SHQYHNQHMLQSGSLATPPWTRKMSIQFCEPSIC+ T* EPYMLSQKW Subject 3119 ANILAIFQPAQSLGSRLSWTHSLTENQERIA*PSAIHPLLCSEDHFQSSQHALCVH*LCQIRQKSCH*G*SPQFHHLCHTWRKCQKLQRLQPSTSY*GRLLGTTPQKCDWCWACTDNSARQLHASPMLKQWL*SCNHSVGRMVGSDLI*DKEFHIGATHSPQTSN*LHILV*SLSASHGA*CKIRQSSHSRHKHSLPVVCEWLELRGLDLLGIHSPQKIEYQPLRQDHQC*VKNRLNAKNNYHHQAQRRY*SHQYHNQHMLQSGSLATPPWTRKMSIQFCEPSICRWT*PEPYMLSQKW 4015
Range 4: 3064 to 4014 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
692.5 bits(1505) | 0.0 | 306/317(97%) | 0/317(0%) | Plus/Minus |
Query 3 QTPLQFFSPLKVWEVGYLGPIH*QKIKSGSLDLPQLIHFYALRATSNLLNMPYVFISYVK*GRNLAIRVNHLNFTIYVTLGANVKSFKGFSQVHHIKAASLAQLLKNVIGAGLAQVIQHVNFTPPQC*SNGCDHATIQWGAWLEVI*FKTKNSXXXXXXXXXXXXDFIFWCDHYQPHMVPNAK*GNHLILGINILSQLFVNGWS*EVWTY*AFTFHKRSNTSL*GKTISAEQKTN*MPKTITITRHREGIEVINIIISTCFNLAA*QHLLGPGK*AFSFVNPQFAS*PNWSLICYHKNGAFLHFLDVEVPFEYLKRS 953 QT LQFFSPLKVWEVGYLGPIH*QKIKSGSLDLPQ IHFYALR TSNLLNMPYVFISYVK*GRNLAIRVNHLNFTIYVTLGANVKSFKGFSQVHHIKAASLAQLLKNVIGAGLAQ+IQHVNFTPPQC*SNGCDHATIQWGAWLEVI*FKTKNST*GPLTLPKLPTDFIFWCDHYQPHMVPNAK*GNHLILGINILSQLFVNGWS*E WTY*AFT HKRSNTSL*GKTISAE KT+*MPKTITITRHREGIEVINIIISTCFNLAA*QHLLGPGK*AFSFVNPQFA PN SLICYHKNGAFLHFLDVEVPFEYLKRS Subject 3064 QTSLQFFSPLKVWEVGYLGPIH*QKIKSGSLDLPQFIHFYALRTTSNLLNMPYVFISYVK*GRNLAIRVNHLNFTIYVTLGANVKSFKGFSQVHHIKAASLAQLLKNVIGAGLAQIIQHVNFTPPQC*SNGCDHATIQWGAWLEVI*FKTKNST*GPLTLPKLPTDFIFWCDHYQPHMVPNAK*GNHLILGINILSQLFVNGWS*EAWTY*AFTLHKRSNTSL*GKTISAE*KTD*MPKTITITRHREGIEVINIIISTCFNLAA*QHLLGPGK*AFSFVNPQFAGGPNRSLICYHKNGAFLHFLDVEVPFEYLKRS 4014
Range 5: 3063 to 4016 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
666.8 bits(1449) | 0.0 | 311/318(98%) | 0/318(0%) | Plus/Minus |
Query 1 SKLPCNFSARSKFGK*VILDPFIDRKSRADRLTFRNSSTFML*GPLPIFSTCLMCSLVMSNKAEILPLGLITSISPFMSHLAQMXXXXXXXXXYIILRPPPWHNSSKM**VLGLHR*FSTSTSRLPNAEAMAVIMQPFSGAHGWK*FDLRQRIPHRGHSLSPNFQLTSYSGVITISLTWCLMQNKAIISFSA*TFSPNCL*MVGAERFGLTRHSLSTKDLIPAFKARPSVPSKKPTECQKQLPSPGTEKVLKXXXXXXXXXXXWQPSNTSLDPENEHSVL*TLNLPVDLTGALYVITKMEPSSIFLMLKSPLNTSKDP 954 SK PCNFSARSKFGK*VILDPFIDRKSRADRLTFRNSSTFML*GPLPIFSTCLMCSLVMSNKAEILPLGLITSISPFMSHLAQMSKASKASAKYIILRPPPWHNSSKM* VLGLHR*FSTSTSRLPNAEAMAVIMQPFSGAHGWK*FDLRQRIPHRGHSLSPNFQLTSYSGVITISLTWCLMQNKAIISFSA*TFSP+CL*MVGAER GLTRHSLSTKD IPAFKARPSV SKKPTECQKQLPSPGTEKVLKSSIS*SAHASIWQPSNTSLDPENEHSVL*TLNLPVDLTGALYVITKMEPSSIFLMLKSPLNT KDP Subject 3063 SKHPCNFSARSKFGK*VILDPFIDRKSRADRLTFRNSSTFML*GPLPIFSTCLMCSLVMSNKAEILPLGLITSISPFMSHLAQMSKASKASAKYIILRPPPWHNSSKM*LVLGLHR*FSTSTSRLPNAEAMAVIMQPFSGAHGWK*FDLRQRIPHRGHSLSPNFQLTSYSGVITISLTWCLMQNKAIISFSA*TFSPSCL*MVGAERLGLTRHSLSTKDRIPAFKARPSVLSKKPTECQKQLPSPGTEKVLKSSIS*SAHASIWQPSNTSLDPENEHSVL*TLNLPVDLTGALYVITKMEPSSIFLMLKSPLNTLKDP 4016
Range 6: 3324 to 4016 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
488.1 bits(1059) | 0.0 | 222/231(96%) | 0/231(0%) | Minus/Plus |
Query 1 RH*WSCLKGWY*IFCGXXXXXXXXXXXSNHSQTIGRECLCRE*DDCLILH*APCEADSDHTRI*SQLEVWGE*VAPMWNSLS*IKSLPTMRPTEWLHDHSHCFSIGEA*S*RAELPVQAQHLSHF*GVVPRRRP*YDVLG*SL*SF*HLRQV*HKW*N*GD*P*WQDFCLI*HN**THKAC*EDWKWPSEHKSG*VAEGQAIRS*FSVNEWVQDNLLPKL*AG*KIAREFA 693 +H*WSCLKGWY IFCG+*MPSKSKPLSSNHSQT GRECLCRE*DDCLILH*APCEADSDHTRI*SQLEVWGE*VAPMWNSLS*IKSLPTMRPTEWLHDHSHCFSIGEA*S*RAEL VQAQH SHF*GVVPRRRP*YDVLG*SL*SF*HLRQV*HKW*N*GD*P*WQDFCLI*HN**THKAC*EDWKW SEHKSG*+AEGQAIRS*FSVNEWVQDNLLPKL*AG*KIAR FA Subject 3324 QH*WSCLKGWYSIFCGE*MPSKSKPLSSNHSQTTGRECLCRE*DDCLILH*APCEADSDHTRI*SQLEVWGE*VAPMWNSLS*IKSLPTMRPTEWLHDHSHCFSIGEA*S*RAELSVQAQHQSHF*GVVPRRRP*YDVLG*SL*SF*HLRQV*HKW*N*GD*P*WQDFCLI*HN**THKAC*EDWKWSSEHKSG*IAEGQAIRS*FSVNEWVQDNLLPKL*AG*KIARMFA 4016
Range 7: 3063 to 3278 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
153.2 bits(328) | 0.0 | 69/72(96%) | 0/72(0%) | Minus/Plus |
Query 739 GIF*GIQRGLQHQENGGRLHFCDNI*GSS*VNWQIEGSQN*MLIFRVQGGVARLPD*SMC*L*Y**LQYLLC 954 GIF*GIQRGLQHQENGGRLHFCDNI*GS *V+ QIEGSQN*MLIFRVQGGVARLPD*SMC*L*Y**LQYLLC Subject 3063 GIF*GIQRGLQHQENGGRLHFCDNI*GSG*VHRQIEGSQN*MLIFRVQGGVARLPD*SMC*L*Y**LQYLLC 3278
Grapevine rupestris stem pitting associated virus isolate TEMP BR replicase, 24.4 kDa protein, 12.8 kDa protein, 8.4 kDa protein, and 28 kDa protein genes, complete cds
Sequence ID: KX925556.1 Length: 8700 Number of Matches: 7
Range 1: 3053 to 4003 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
733.3 bits(1594) | 0.0 | 299/317(94%) | 0/317(0%) | Minus/Plus |
Query 3 GSFEVFKGDFNIKKMEEGSIFVITYKAPVRSTGKLRVHKTECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLGTDGLALKAGIRSFVESECLVSPNLSAPTIHKQLGENVYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCKPSTYHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGSGPQSIKVDELRKVKRSALDFLSMNGSKITYFPNFERAEKLQGSL 953 GSFEVFKGDFNIKKMEEGSIFVI+YKAPVRSTGKLRVHK+ECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLL TDGLALKAGIRSFVESE LVS +LSAPT+ KQL EN YAENEMIALFCIRHHVRLIV+TPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVD+LNYLC+PST HIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIG+GPQSIKVDELRKVKRSALD LSMNGS+ITYFPNFERAEKLQG L Subject 3053 GSFEVFKGDFNIKKMEEGSIFVISYKAPVRSTGKLRVHKSECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESERLVSSDLSAPTVSKQLEENAYAENEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDILNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSRITYFPNFERAEKLQGCL 4003
Range 2: 3052 to 4005 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
599.0 bits(1301) | 0.0 | 282/318(89%) | 0/318(0%) | Plus/Minus |
Query 1 SKLPCNFSARSKFGK*VILDPFIDRKSRADRLTFRNSSTFML*GPLPIFSTCLMCSLVMSNKAEILPLGLITSISPFMSHLAQMXXXXXXXXXYIILRPPPWHNSSKM**VLGLHR*FSTSTSRLPNAEAMAVIMQPFSGAHGWK*FDLRQRIPHRGHSLSPNFQLTSYSGVITISLTWCLMQNKAIISFSA*TFSPNCL*MVGAERFGLTRHSLSTKDLIPAFKARPSVPSKKPTECQKQLPSPGTEKVLKXXXXXXXXXXXWQPSNTSLDPENEHSVL*TLNLPVDLTGALYVITKMEPSSIFLMLKSPLNTSKDP 954 SK PCNFSARSKFGK*VILDPFI+R+SRADRLTF NSSTFML*GPLPIFSTCLMCSLV+SN+AEILP GL+TSISPFMSHLAQ+SKASKASAKYIIL PPPWH+SSKM* VLGLHR*F STSRLP+AEAMAVIMQPFSGAHGWK* D RQRIPHRGHSLSPNFQLTSYSGV TISLTWC +QN AIISFSA* FS NCL VGAER LTR SLSTKD +PAF+A+PSV SKKPTECQKQLPSPGTEKVLKSSIS*SAHASIWQPSNTSLDPENEHS L*TLNLPVDLTGALY ITKMEPSSIFLMLKSPL TSKDP Subject 3052 SKHPCNFSARSKFGK*VILDPFIERRSRADRLTFLNSSTFML*GPLPIFSTCLMCSLVISNRAEILPFGLMTSISPFMSHLAQISKASKASAKYIILSPPPWHSSSKM*LVLGLHR*FKISTSRLPSAEAMAVIMQPFSGAHGWK*LDFRQRIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQNNAIISFSA*AFSSNCLETVGAERSELTRRSLSTKDRMPAFRAKPSVLSKKPTECQKQLPSPGTEKVLKSSIS*SAHASIWQPSNTSLDPENEHSDL*TLNLPVDLTGALYDITKMEPSSIFLMLKSPLKTSKDP 4005
Range 3: 3059 to 4003 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
462.9 bits(1004) | 0.0 | 211/315(67%) | 0/315(0%) | Plus/Minus |
Query 3 QTPLQFFSPLKVWEVGYLGPIH*QKIKSGSLDLPQLIHFYALRATSNLLNMPYVFISYVK*GRNLAIRVNHLNFTIYVTLGANVKSFKGFSQVHHIKAASLAQLLKNVIGAGLAQVIQHVNFTPPQC*SNGCDHATIQWGAWLEVI*FKTKNSXXXXXXXXXXXXDFIFWCDHYQPHMVPNAK*GNHLILGINILSQLFVNGWS*EVWTY*AFTFHKRSNTSL*GKTISAEQKTN*MPKTITITRHREGIEVINIIISTCFNLAA*QHLLGPGK*AFSFVNPQFAS*PNWSLICYHKNGAFLHFLDVEVPFEYLK 947 Q PLQ FSPLKVW++GY GPIH*+K+K L+LPQ I+FYALRA ++LL+MPYV I Y+K GRNL I VN LNF IYVTL AN+K FK FSQVHHIK +SLAQLLKNVI A Q+I ++NFTPP+ * NG DHATIQWGAWLEVI + KNST*GPLT PK PT+FIFWC +YQ +MVP+ + NHLIL I+I QLF NGWS*++ T *A T HKRSN SL T+S E +TN*MPK I +TR+RE I++INIIISTC LA *Q+LLGPGK*A FVNP F NW L+ YHKNGA LHF DVEVP E K Subject 3059 QAPLQLFSPLKVWKIGYSGPIH*KKVKGRPLNLPQFIYFYALRAIADLLDMPYVLIGYIKQGRNLTIWVNDLNFPIYVTLSANIKGFKSFSQVHHIKPSSLAQLLKNVISARSTQII*NINFTPPKR*GNGRDHATIQWGAWLEVIGLQAKNST*GPLTFPKFPTNFIFWCYYYQSYMVPDTEQCNHLILSISIFFQLFRNGWS*KI*TN*ALTLHKRSNASLQS*TVSTE*ETN*MPKAIAVTRYRESIKIINIIISTCLYLAT*QYLLGPGK*AL*FVNP*FTGGSNWGLV*YHKNGALLHFFDVEVPLENFK 4003
Range 4: 3108 to 4004 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
430.9 bits(934) | 0.0 | 195/299(65%) | 0/299(0%) | Plus/Minus |
Query 2 ANSLAIFQPAQSLGSRLSWTHSLTENQERIA*PSATHPLLCSEGHFQSSQHALCVH*LCQIRQKSCH*G*SPQFHHLCHTWRKCQKLQRLQPSTSY*GRLLGTTPQKCDRCWACTGNSARQLHASPMLKQWL*SCNHSVGRMVGSDLI*DKEFHIGATHSPQTSN*LHILV*SLSASHGA*CKIRQSSHSRHKHSLPIVCEWLELRGLDLLGIHFPQKI*YQPLRQDHQCRAKNQLNAKNNYHHQAQRRY*SHQYHNQHMLQSGSLATPPWTRKMSIQFCEPSICQLT*LEPYMLSQKW 898 A++LA FQPAQSL +RL WTHSL E Q + A*PS+ H LLCSEGH +SS+HALC H L Q QKS H G* PQF HLCHT RK Q+LQ+LQPSTSY* L GT PQKCD C T N QLHAS L+QW *SCNHSVGRMVGSD KEFHIGATH PQ SN*LHILV LS HGA + QSSHS+HKH LPIV + LEL+ L+ LG H PQKI QP + Q +NQLNAK+N HQ QR+Y*+HQYHNQHM SG+LA PPWTRKMS CEP I + *L P M+SQKW Subject 3108 ASTLATFQPAQSLENRLFWTHSLKEGQGQTA*PSSIHLLLCSEGHCRSSRHALCAHWLYQTGQKSYHLG**PQFPHLCHT*RKYQRLQKLQPSTSY*ALLPGTAPQKCD*C*VYTDNLKYQLHASQALRQWP*SCNHSVGRMVGSDWTSGKEFHIGATHFPQISN*LHILVLLLSVLHGAGYRTMQSSHSQHKHFLPIV*KRLELKDLN*LGAHSPQKIECQPSELNRQY*VRNQLNAKSNCRHQVQRKY*NHQYHNQHMPLSGNLAIPPWTRKMSTLICEPLIYRWI*LGPCMISQKW 4004
Range 5: 3051 to 4004 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
427.7 bits(927) | 0.0 | 214/318(67%) | 0/318(0%) | Minus/Plus |
Query 2 WDLLRYSKGTSTSRKWRKAPFL**HIRLQLGQLAN*GFTKLNAHFPGPRRCC*AARLKHVLIMILMTSIPSLCLVMVIVFGIQLVFCSALMVLP*RLVLDLLWKVNA**VQTSQLQPFTNNWERMFMPRMR*LPYFALGTM*G***SHQNMKSVGSLGRVSGPYVEFFVLNQITSNHAPH*MVA*SQPLLQHWGGVKLTC*ITCASPAPITFLRSCAKEAALI*CTWLKPLKLLTFAPSVT*MVKLR*LTLMARFLPYLT*LMNT*GMLRRLEVALRA*KWMSCGRSSDPLLIFCQ*MGPR*PTSQTLSGLKNCKGVC 955 W L++S+GTSTS+KWR+APFL* H R QL N*GFT +AHFPGPRR C* AR +HVLIMILM I SL LV I FGIQLV S L V *RL DLLW+V+A* VQ QLQPF NNW++M M RMR*L GTM* *** HQNMK VG+LG+VSGPYVEFF + ITSNHAPH*MVA*S+PL Q GGVKL *I C A ITFLRSCA+E LI*CTWLK LK L FA SVT*M KLR LT M RFLP L * M+T*GM RR +ALRA*K M+ GR S L F Q*MGP *P QTLSGLK+CKG C Subject 3051 WGPLKFSRGTSTSKKWRRAPFL*YHTRPQLDPPVN*GFTNQSAHFPGPRRYC*VAR*RHVLIMILMILILSLYLVTAIAFGIQLVSYSVLTV*L*RLAFDLLWRVSA*LVQIFQLQPFLNNWKKMLMLRMR*LHCSVSGTM*D****HQNMKLVGNLGKVSGPYVEFFA*SPITSNHAPH*MVA*SRPLPQRLGGVKLIF*IICVDLALITFLRSCAREEGLI*CTWLKLLKPLIFALSVT*MGKLRSLTQMVRFLPCLI*PMST*GMSRRSAMALRA*K*MN*GRLSGLPLTFFQ*MGPE*PIFQTLSGLKSCKGAC 4004
Range 6: 3409 to 4005 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
297.5 bits(643) | 0.0 | 136/199(68%) | 0/199(0%) | Minus/Plus |
Query 1 TIGRECLCRE*DDCLILH*APCEADSDHTRI*SQLEVWGE*VAPMWNSLS*IKSLPTMRPTEWLHDHSHCFSIGEA*S*RAELPVQAQHLSHF*GVVPRRRP*YDVLG*SL*SF*HLRQV*HKW*N*GD*P*WQDFCLI*HN**THKAC*EDWKWPSEHKSG*VAEGQAIRS*FSVNEWVQDNLLPKL*AG*KIAREFA 597 TIGR+CLC E*DDC++L+ APC+ DS +TRI*S LE+WG+*VAPMWNSL ++SLPTMRPTEWLHDH HC S EA*S* +L V H SHF*G VP RR *YDVLG*S *S *+LR V*HKW N*G *P W DFC +*+N * HKAC ED +WPSEHKS *+ EG A+ * S NEWVQ+NL KL*AG*K+AR A Subject 3409 TIGRKCLC*E*DDCIVLYPAPCKTDSSNTRI*S*LEIWGK*VAPMWNSLPEVQSLPTMRPTEWLHDHGHCLSAWEA*S*YFKLSV*T*H*SHF*GAVPGRRA*YDVLG*SF*SL*YLR*V*HKWGN*GH*PKW*DFCPV*YNQ*AHKACREDRQWPSEHKSR*IEEG*AVCP*PSFNEWVQNNLFSKL*AG*KVARVLA 4005
Range 7: 3052 to 3267 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
103.2 bits(219) | 0.0 | 48/72(67%) | 0/72(0%) | Minus/Plus |
Query 739 GIF*GIQRGLQHQENGGRLHFCDNI*GSS*VNWQIEGSQN*MLIFRVQGGVARLPD*SMC*L*Y**LQYLLC 954 G+ * Q GLQHQ+NGG LHFCD I G S*++ I+GSQ +LIFRVQGG+ARLPD MC*L*Y** Y LC Subject 3052 GVL*SFQGGLQHQKNGGGLHFCDIIQGPS*IHR*IKGSQIRVLIFRVQGGIARLPDRGMC*L*Y**F*YFLC 3267
Grapevine rupestris stem pitting associated virus complete genome, genomic RNA, isolate GRSPaV MG
Sequence ID: FR691076.1 Length: 8749 Number of Matches: 8
Range 1: 3064 to 4014 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
732.8 bits(1593) | 0.0 | 300/317(95%) | 0/317(0%) | Minus/Plus |
Query 3 GSFEVFKGDFNIKKMEEGSIFVITYKAPVRSTGKLRVHKTECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLGTDGLALKAGIRSFVESECLVSPNLSAPTIHKQLGENVYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCKPSTYHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGSGPQSIKVDELRKVKRSALDFLSMNGSKITYFPNFERAEKLQGSL 953 GSFEVFKGDF+IKKMEEGSIFVITYKAPVRSTGKLRVHK+ECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLL TDG ALKAGIRSFVESE L+S +LSAPTI KQL EN YAENEMIALFCIRHHVRLIV+TPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLC+PST HIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIG+GPQSIKVDELRKVKRSALD LSMNGSKITYFPNFERAEKLQG L Subject 3064 GSFEVFKGDFHIKKMEEGSIFVITYKAPVRSTGKLRVHKSECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGFALKAGIRSFVESERLISSDLSAPTISKQLEENAYAENEMIALFCIRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPNFERAEKLQGCL 4014
Range 2: 3063 to 4016 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
596.3 bits(1295) | 0.0 | 280/318(88%) | 0/318(0%) | Plus/Minus |
Query 1 SKLPCNFSARSKFGK*VILDPFIDRKSRADRLTFRNSSTFML*GPLPIFSTCLMCSLVMSNKAEILPLGLITSISPFMSHLAQMXXXXXXXXXYIILRPPPWHNSSKM**VLGLHR*FSTSTSRLPNAEAMAVIMQPFSGAHGWK*FDLRQRIPHRGHSLSPNFQLTSYSGVITISLTWCLMQNKAIISFSA*TFSPNCL*MVGAERFGLTRHSLSTKDLIPAFKARPSVPSKKPTECQKQLPSPGTEKVLKXXXXXXXXXXXWQPSNTSLDPENEHSVL*TLNLPVDLTGALYVITKMEPSSIFLMLKSPLNTSKDP 954 SK PCNFSARSKFGK*VILDPFI+R+SRADRLTF NSSTFML*GPLPIFSTCLMCSLV+SNKAEILP GL+TSISPF+SHLAQ+SKASKASAKYIIL PPPWH+SSKM VLGLHR*F+TSTSRLP+AEAMAVIMQPFSGAHGWK* D RQRIPHRGHSLSPNFQLTSYSGV TISLTWC +QN AIISFSA* FS NCL MVGAER L R SLSTKD +PAF+A+PSV S+KPTECQKQLPSPGTEKVLKSSIS*SAHASIWQPSNTSLDPENEHS L TLNLPVDLTGALYVITKMEPSSIFLM KSPL TSKDP Subject 3063 SKHPCNFSARSKFGK*VILDPFIERRSRADRLTFLNSSTFML*GPLPIFSTCLMCSLVISNKAEILPFGLMTSISPFISHLAQISKASKASAKYIILSPPPWHSSSKMWLVLGLHR*FNTSTSRLPSAEAMAVIMQPFSGAHGWK*LDFRQRIPHRGHSLSPNFQLTSYSGVTTISLTWCRIQNNAIISFSA*AFSSNCLEMVGAERSELIRRSLSTKDRMPAFRAKPSVLSRKPTECQKQLPSPGTEKVLKSSIS*SAHASIWQPSNTSLDPENEHSDLWTLNLPVDLTGALYVITKMEPSSIFLMWKSPLKTSKDP 4016
Range 3: 3067 to 4014 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
481.3 bits(1044) | 0.0 | 218/316(69%) | 0/316(0%) | Plus/Minus |
Query 3 QTPLQFFSPLKVWEVGYLGPIH*QKIKSGSLDLPQLIHFYALRATSNLLNMPYVFISYVK*GRNLAIRVNHLNFTIYVTLGANVKSFKGFSQVHHIKAASLAQLLKNVIGAGLAQVIQHVNFTPPQC*SNGCDHATIQWGAWLEVI*FKTKNSXXXXXXXXXXXXDFIFWCDHYQPHMVPNAK*GNHLILGINILSQLFVNGWS*EVWTY*AFTFHKRSNTSL*GKTISAEQKTN*MPKTITITRHREGIEVINIIISTCFNLAA*QHLLGPGK*AFSFVNPQFAS*PNWSLICYHKNGAFLHFLDVEVPFEYLKR 950 Q PLQ FSPLKVW++GY GPIH*+KIKSGSL+LPQLI+FYALRA ++LLNMPYV I Y+K G NL I VN LNF IY+TL AN+KS K SQVHHIK + LAQLLKNV+GA A +I H+NFTPP+ * NG DHATIQWGAWLEVI + KNST*GPLT PKLPT+FIFWC +YQP++VP+ K* NHLILGI+IL QLF NGWS*++ T A T HKRSN L KTIS EQKTN*MPK I ITR+ E +++INIIISTC NLA Q+LLG GK*A FV+P S NW L+CY+KNG LHF +VEVPFE KR Subject 3067 QAPLQLFSPLKVWKIGYFGPIH*KKIKSGSLNLPQLIYFYALRAIADLLNMPYVLIGYIKQGGNLTIWVNDLNFPIYITLSANIKSLKSLSQVHHIKPSPLAQLLKNVVGARPA*II*HINFTPPKR*GNGRDHATIQWGAWLEVIGLQAKNST*GPLTFPKLPTNFIFWCYYYQPYVVPDTK*CNHLILGISILFQLFRNGWS*KI*TNKALTLHKRSNAGLQSKTISTEQKTN*MPKAIAITRYGESVKIINIIISTCLNLATQQYLLGSGK*AL*FVDP*LTSGSNWGLVCYYKNGTLLHFFNVEVPFEDFKR 4014
Range 4: 3062 to 4015 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
459.3 bits(996) | 0.0 | 222/318(70%) | 0/318(0%) | Minus/Plus |
Query 2 WDLLRYSKGTSTSRKWRKAPFL**HIRLQLGQLAN*GFTKLNAHFPGPRRCC*AARLKHVLIMILMTSIPSLCLVMVIVFGIQLVFCSALMVLP*RLVLDLLWKVNA**VQTSQLQPFTNNWERMFMPRMR*LPYFALGTM*G***SHQNMKSVGSLGRVSGPYVEFFVLNQITSNHAPH*MVA*SQPLLQHWGGVKLTC*ITCASPAPITFLRSCAKEAALI*CTWLKPLKLLTFAPSVT*MVKLR*LTLMARFLPYLT*LMNT*GMLRRLEVALRA*KWMSCGRSSDPLLIFCQ*MGPR*PTSQTLSGLKNCKGVC 955 W LL+ SKGTST +KWR+ PFL**H R QL L +*G T +AHFP PRR C ARL+HVLIMILM S LVM I FGIQLVFCS LMVL *R DLLW+V+A VQ QLQPF NNW+RM MPRMR*L YF GT *G*** HQNMK VGSLG+VSGPYVEFF + ITSNHAPH*MVA*S+PL Q GGVKL C*I A AP TFLRSCA+ LI*CTWL+ L+LL FA SV *M KLR LT M RF P L * M+T*GMLRR +ALRA*K MS GR SDPLLIF Q*MGP+*P QTLSGLK+CKG C Subject 3062 WGLLKSSKGTSTLKKWRRVPFL**HTRPQLDPLVS*GSTNQSAHFPDPRRYCWVARLRHVLIMILMILTLSPYLVMAIAFGIQLVFCSVLMVLL*RPAFDLLWRVSALLVQIFQLQPFLNNWKRMLMPRMR*LHYFVSGTT*G****HQNMKLVGSLGKVSGPYVEFFA*SPITSNHAPH*MVA*SRPLPQRLGGVKLMC*IIYAGLAPTTFLRSCARGEGLI*CTWLRLLRLLIFALSVI*MGKLRSLTQMVRFPPCLI*PMST*GMLRRSAMALRA*K*MS*GRLSDPLLIFFQ*MGPK*PIFQTLSGLKSCKGAC 4015
Range 5: 3119 to 4015 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
441.9 bits(958) | 0.0 | 201/299(67%) | 0/299(0%) | Plus/Minus |
Query 2 ANSLAIFQPAQSLGSRLSWTHSLTENQERIA*PSATHPLLCSEGHFQSSQHALCVH*LCQIRQKSCH*G*SPQFHHLCHTWRKCQKLQRLQPSTSY*GRLLGTTPQKCDRCWACTGNSARQLHASPMLKQWL*SCNHSVGRMVGSDLI*DKEFHIGATHSPQTSN*LHILV*SLSASHGA*CKIRQSSHSRHKHSLPIVCEWLELRGLDLLGIHFPQKI*YQPLRQDHQCRAKNQLNAKNNYHHQAQRRY*SHQYHNQHMLQSGSLATPPWTRKMSIQFCEPSICQLT*LEPYMLSQKW 898 A++LA FQPAQSL +RL WTHSL E+QERIA*PS+TH LLCSEGH +SSQHALC H L Q R+KS H G* PQF HL HT RK QK Q+ QPSTSY* GT PQKC C AC N QLHAS L+QW *SCNHSVGRMVGSD KEFHIGATH PQTSN*LHILV LSA GA KI QSSHSRHKHSLPIV +WLEL+ L+ G H PQKI +P Q+HQ A+NQLNAK+N HHQ +R+ *+HQYHNQHM QSG+ A PPW RKMS C P Q *L P ML QKW Subject 3119 ASTLATFQPAQSLENRLFWTHSLKEDQERIA*PSSTHLLLCSEGHCRSSQHALCAHWLYQTRRKSYHLG**PQFPHLYHT*RKYQKPQKPQPSTSY*ALPPGTAPQKCGWC*ACIDNLTHQLHASQALRQWP*SCNHSVGRMVGSDWTSGKEFHIGATHFPQTSN*LHILVLLLSALRGAGYKIMQSSHSRHKHSLPIV*KWLELKDLN**GAHSPQKIECRPSEQNHQY*AENQLNAKSNCHHQVRRKC*NHQYHNQHMPQSGNPAIPPWIRKMSTLICGPLTYQWI*LGPCMLLQKW 4015
Range 6: 3408 to 4016 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
309.0 bits(668) | 0.0 | 144/203(71%) | 0/203(0%) | Minus/Plus |
Query 1 NHSQTIGRECLCRE*DDCLILH*APCEADSDHTRI*SQLEVWGE*VAPMWNSLS*IKSLPTMRPTEWLHDHSHCFSIGEA*S*RAELPVQAQHLSHF*GVVPRRRP*YDVLG*SL*SF*HLRQV*HKW*N*GD*P*WQDFCLI*HN**THKAC*EDWKWPSEHKSG*VAEGQAIRS*FSVNEWVQDNLLPKL*AG*KIAREFA 609 NH TIGRECLCRE*DDC+IL+ AP +ADS +TRI*S LEVWG+*VAPMWNSL ++SLPTMRPTEWLHDH HC S EA*S* +L +QA H HF*G VP R *YDVLG* * F*+LR V*+KW N*G *P W DF L+*+N * HKAC*ED +WPSEHKS *V EG AIRS* S NEWVQ+NL KL*AG*K+AR A Subject 3408 NHF*TIGRECLCRE*DDCIILYPAPRKADSSNTRI*S*LEVWGK*VAPMWNSLPEVQSLPTMRPTEWLHDHGHCLSAWEA*S*CVKLSMQA*HQPHF*GAVPGGRA*YDVLG*GF*GF*YLR*V*YKWGN*GH*PKW*DFRLV*YNQ*AHKAC*EDRQWPSEHKSR*VEEG*AIRS*SSFNEWVQNNLFSKL*AG*KVARVLA 4016
Range 7: 3063 to 3275 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
99.1 bits(210) | 0.0 | 43/71(61%) | 0/71(0%) | Minus/Plus |
Query 742 GIF*GIQRGLQHQENGGRLHFCDNI*GSS*VNWQIEGSQN*MLIFRVQGGVARLPD*SMC*L*Y**LQYLL 954 G+F* +QRGL H +NGG HFC+NI G S*++W ++G Q +LIFR+QGG+A LPD* MC*L*Y** + L Subject 3063 GVF*SLQRGLPH*KNGGGFHFCNNIQGPS*IHW*VKGPQIRVLIFRIQGGIAGLPD*GMC*L*Y**F*HFL 3275
Grapevine rupestris stem pitting associated virus isolate SK704 C, complete genome
Sequence ID: KX274276.1 Length: 8726 Number of Matches: 7
Range 1: 3065 to 4015 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
732.8 bits(1593) | 0.0 | 300/317(95%) | 0/317(0%) | Minus/Plus |
Query 3 GSFEVFKGDFNIKKMEEGSIFVITYKAPVRSTGKLRVHKTECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLGTDGLALKAGIRSFVESECLVSPNLSAPTIHKQLGENVYAENEMIALFCIRHHVRLIVITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCKPSTYHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGSGPQSIKVDELRKVKRSALDFLSMNGSKITYFPNFERAEKLQGSL 953 GSFEVFKGDF+IKKMEEGSIFVITYKAPVRSTGKLRVHK+ECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLL TDGLALKAGIRSFVESE LVS +LSAPTI KQL EN YAENEMIALFC+RHHVRLIV+TPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLC+PST HIFEELCQGGGLNMMYL EAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIG+GPQSIKVDELRKVKRSALD LSMNGSKITYFPNFERAEKLQG L Subject 3065 GSFEVFKGDFHIKKMEEGSIFVITYKAPVRSTGKLRVHKSECSFSGSKEVLLGCQIEACADYDIDDFNTFSVPGDGNCFWHSVGFLLSTDGLALKAGIRSFVESERLVSSDLSAPTISKQLEENAYAENEMIALFCVRHHVRLIVVTPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLTEAFEAFDICAKCDINGEIEVINPNGKISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPNFERAEKLQGCL 4015
Range 2: 3064 to 4017 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
591.2 bits(1284) | 0.0 | 278/318(87%) | 0/318(0%) | Plus/Minus |
Query 1 SKLPCNFSARSKFGK*VILDPFIDRKSRADRLTFRNSSTFML*GPLPIFSTCLMCSLVMSNKAEILPLGLITSISPFMSHLAQMXXXXXXXXXYIILRPPPWHNSSKM**VLGLHR*FSTSTSRLPNAEAMAVIMQPFSGAHGWK*FDLRQRIPHRGHSLSPNFQLTSYSGVITISLTWCLMQNKAIISFSA*TFSPNCL*MVGAERFGLTRHSLSTKDLIPAFKARPSVPSKKPTECQKQLPSPGTEKVLKXXXXXXXXXXXWQPSNTSLDPENEHSVL*TLNLPVDLTGALYVITKMEPSSIFLMLKSPLNTSKDP 954 SK PC+FSARSKFGK*VILDPFI+R+SRADRLTF NSSTFML*GPLPIFSTCLMCSLV+SNKAEILP GLITSISPFMSH AQMSKASKAS KYI+L PPPWH+SSKM VLGLHR*F+TSTSRLP+AEAMAVIMQPF+GA GWK* D RQRIPHRGHSLSPNFQLTSYSGV TISLTWC QN AIISFSA* FS NCL +VGAER LTR SLSTKD +PAF+ARPSV SKKPTECQKQLPSPGTEKVLKSSIS*SAHASIWQPSNTSLDPENEHS L TL+LPVDLTGALYVITKMEPSSIFLM KSPL TSKDP Subject 3064 SKHPCSFSARSKFGK*VILDPFIERRSRADRLTFLNSSTFML*GPLPIFSTCLMCSLVISNKAEILPFGLITSISPFMSHFAQMSKASKASVKYIMLSPPPWHSSSKMWLVLGLHR*FNTSTSRLPSAEAMAVIMQPFNGAQGWK*LDFRQRIPHRGHSLSPNFQLTSYSGVTTISLTWCRTQNNAIISFSA*AFSSNCLEIVGAERSELTRRSLSTKDRMPAFRARPSVLSKKPTECQKQLPSPGTEKVLKSSIS*SAHASIWQPSNTSLDPENEHSDLWTLSLPVDLTGALYVITKMEPSSIFLMWKSPLKTSKDP 4017
Range 3: 3068 to 4015 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
481.3 bits(1044) | 0.0 | 217/316(69%) | 0/316(0%) | Plus/Minus |
Query 3 QTPLQFFSPLKVWEVGYLGPIH*QKIKSGSLDLPQLIHFYALRATSNLLNMPYVFISYVK*GRNLAIRVNHLNFTIYVTLGANVKSFKGFSQVHHIKAASLAQLLKNVIGAGLAQVIQHVNFTPPQC*SNGCDHATIQWGAWLEVI*FKTKNSXXXXXXXXXXXXDFIFWCDHYQPHMVPNAK*GNHLILGINILSQLFVNGWS*EVWTY*AFTFHKRSNTSL*GKTISAEQKTN*MPKTITITRHREGIEVINIIISTCFNLAA*QHLLGPGK*AFSFVNPQFAS*PNWSLICYHKNGAFLHFLDVEVPFEYLKR 950 QTPLQ FSPLKV E+GYLGPIH*+KIK GSL+LPQ I+FYALRA +NLLNMPYV I Y+K G NL I VN+LNF IYVTL ANVKS K FSQVHH+K +SLAQLLKNV+ A Q+I H+NFTPP+ * NGCDHATIQWGA LEVI + KNST* PLT PK PT+FIFWC HYQP++VP+ K* NH I I IL QLF N WS*++ T AFTFH+RSN L KTIS EQ+TN*MPK I ITR+ E +++INIIISTC NLA *Q+LLG G+*A FV+P S NW L+CY+KNGA LHF +VEVPFE KR Subject 3068 QTPLQLFSPLKVREIGYLGPIH*KKIKGGSLNLPQFIYFYALRAIANLLNMPYVLIGYIKQGGNLTIWVNNLNFPIYVTLRANVKSLKSFSQVHHVKPSSLAQLLKNVVSARPTQII*HINFTPPKR*GNGCDHATIQWGARLEVIGLQAKNST*RPLTFPKFPTNFIFWCYHYQPYVVPDTK*CNHFIFSIGILLQLFRNSWS*KI*TNQAFTFHERSNAGLQSKTISTEQETN*MPKAIAITRYGESVKIINIIISTCLNLAT*QYLLGSGE*AL*FVDP*LTSGSNWGLVCYYKNGALLHFFNVEVPFENFKR 4015
Range 4: 3063 to 4016 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
433.6 bits(940) | 0.0 | 217/318(68%) | 0/318(0%) | Minus/Plus |
Query 2 WDLLRYSKGTSTSRKWRKAPFL**HIRLQLGQLAN*GFTKLNAHFPGPRRCC*AARLKHVLIMILMTSIPSLCLVMVIVFGIQLVFCSALMVLP*RLVLDLLWKVNA**VQTSQLQPFTNNWERMFMPRMR*LPYFALGTM*G***SHQNMKSVGSLGRVSGPYVEFFVLNQITSNHAPH*MVA*SQPLLQHWGGVKLTC*ITCASPAPITFLRSCAKEAALI*CTWLKPLKLLTFAPSVT*MVKLR*LTLMARFLPYLT*LMNT*GMLRRLEVALRA*KWMSCGRSSDPLLIFCQ*MGPR*PTSQTLSGLKNCKGVC 955 W LL++SKGTST +KWR+APFL**H R QL L +*G T +AH P PRR C* ARL+HVLIMILM S LVM I FGIQLV CS LMVL *R DL WKVNA VQ QLQ F NNW RM M +M+*L YF GT *G** HQNMK VG+LG+VSG YVEFF + ITS+ APH*MVA*SQPL Q GGVKL C*I C A TFLRSCA+E L *CT LK L+LLTFA SVT*M KLR LT M RF P L * M+T*GMLRRL +ALRA*K M+ GR SDP LIF Q*MGPR*P S+TLSGLK+CKGVC Subject 3063 WGLLKFSKGTSTLKKWRRAPFL**HTRPQLDPLVS*GSTNQSAHSPDPRRYC*VARLRHVLIMILMILTLSPYLVMAIAFGIQLVSCSVLMVLL*RPAFDLSWKVNAWLVQIFQLQLFLNNWRRMPMLKMK*LHYFVSGTT*G**W*HQNMKLVGNLGKVSGLYVEFFA*SPITSSLAPH*MVA*SQPLPQRLGGVKLMC*IICVGLALTTFLRSCAREEGLT*CT*LKLLRLLTFARSVT*MGKLRLLTQMVRFPPCLI*PMST*GMLRRLAMALRA*K*MN*GRLSDPPLIFFQ*MGPR*PISRTLSGLKSCKGVC 4016
Range 5: 3120 to 4016 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
430.9 bits(934) | 0.0 | 195/299(65%) | 0/299(0%) | Plus/Minus |
Query 2 ANSLAIFQPAQSLGSRLSWTHSLTENQERIA*PSATHPLLCSEGHFQSSQHALCVH*LCQIRQKSCH*G*SPQFHHLCHTWRKCQKLQRLQPSTSY*GRLLGTTPQKCDRCWACTGNSARQLHASPMLKQWL*SCNHSVGRMVGSDLI*DKEFHIGATHSPQTSN*LHILV*SLSASHGA*CKIRQSSHSRHKHSLPIVCEWLELRGLDLLGIHFPQKI*YQPLRQDHQCRAKNQLNAKNNYHHQAQRRY*SHQYHNQHMLQSGSLATPPWTRKMSIQFCEPSICQLT*LEPYMLSQKW 898 AN+LA FQPAQS G+RLSWTHSL E+Q RIA*PS+ H LLCSEGH QSSQHALC H L Q R+KS H G* PQF HLCHT RKCQK Q+LQ STS * L GT PQKC C A T N QLHAS L+QWL*SCNHS+GR GSD KEFHI ATH PQ SN*LHILV LSA GA KI QS H +H+HS PIV + LEL+ L+ G+HFP+KI +P QDHQ A+NQLNAK+N HHQ +R+ *+HQYHNQHM QSG+LA PPW R+MS C P Q *L P ML QKW Subject 3120 ANTLAAFQPAQSSGNRLSWTHSLKEDQGRIA*PSSIHLLLCSEGHCQSSQHALCAHWLYQTRRKSYHLG**PQFPHLCHTSRKCQKPQKLQSSTSC*ALLPGTAPQKCG*C*AYTDNLTHQLHASQALRQWL*SCNHSMGRKAGSDWTSGKEFHIEATHFPQISN*LHILVLPLSALRGAGHKIMQSFHFQHRHSPPIV*K*LELKDLN*PGVHFPRKIECRPSEQDHQY*ARNQLNAKSNCHHQVRRKC*NHQYHNQHMPQSGNLAIPPWIRRMSTLICGPLAYQWI*LGPCMLLQKW 4016
Range 6: 3409 to 4017 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
295.2 bits(638) | 0.0 | 138/203(68%) | 0/203(0%) | Minus/Plus |
Query 1 NHSQTIGRECLCRE*DDCLILH*APCEADSDHTRI*SQLEVWGE*VAPMWNSLS*IKSLPTMRPTEWLHDHSHCFSIGEA*S*RAELPVQAQHLSHF*GVVPRRRP*YDVLG*SL*SF*HLRQV*HKW*N*GD*P*WQDFCLI*HN**THKAC*EDWKWPSEHKSG*VAEGQAIRS*FSVNEWVQDNLLPKL*AG*KIAREFA 609 N+ TIG ECLC +*+DC+IL AP +ADS +TRI*S LE+WG+*VA MWNSL ++SLP +RP EWLHDHSHC S EA*S* +L V A H HF*G VP RR *+DVL *S * F*HLR+V*HKW N*G *P W DF L+*+N * HKAC*EDW+WPSEHKS *+ EG AIR * S NEWVQDNL P+L*AG*K AR FA Subject 3409 NYF*TIGGECLC*K*NDCIILCPAPRKADSGNTRI*S*LEIWGK*VASMWNSLPEVQSLPALRPIEWLHDHSHCLSAWEA*S*CVKLSV*A*H*PHF*GAVPGRRA*HDVLD*SF*GF*HLREV*HKWGN*GY*PKW*DFRLV*YNQ*AHKAC*EDWQWPSEHKSR*IEEG*AIRP*SSFNEWVQDNLFPEL*AG*KAARVFA 4017
Range 7: 3064 to 3276 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
98.7 bits(209) | 0.0 | 44/71(62%) | 0/71(0%) | Minus/Plus |
Query 742 GIF*GIQRGLQHQENGGRLHFCDNI*GSS*VNWQIEGSQN*MLIFRVQGGVARLPD*SMC*L*Y**LQYLL 954 G+F* QRGL H +NGG LHFC+NI G S*++W +G Q +LI R+QGG+ARLPD* MC*L*Y** + L Subject 3064 GVF*SFQRGLPH*KNGGGLHFCNNIQGPS*IHW*AKGPQIRVLILRIQGGIARLPD*GMC*L*Y**F*HFL 3276
Nucleotide Sequence (332 letters)
Query ID: | ds2016-133_14 |
Query definition: | No definition line |
Query length: | 603 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
227.0 | 1164.3 | 28% | 6.84e-58 | 83% | KX958435.1 | |
227.0 | 1242.7 | 28% | 6.84e-58 | 90% | KX274274.1 | |
219.6 | 1090.5 | 28% | 1.102e-55 | 79% | KT948710.1 | |
215.1 | 933.4 | 28% | 2.639e-54 | 66% | KR054734.1 | |
211.8 | 886.2 | 28% | 2.437e-53 | 64% | AY368172.2 |
Alignments
Grapevine rupestris stem pitting associated virus isolate CS BR, complete genome
Sequence ID: KX958435.1 Length: 8743 Number of Matches: 6
Range 1: 2561 to 2836 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.0 bits(489) | 0.0 | 91/92(99%) | 0/92(0%) | Minus/Plus |
Query 33 GNNCSLVIRPGEFFEMPRGMQNNYFHGVSNCENGRVSMTFRRQKLEDEDQVFISPQVPIEQKHEKLDRNMWQLGLHGIKKSISINGTSFSSD 308 GNNCSLVIRPGEFFEMPRGMQNNYFHGVSNCE+GRVSMTFRRQKLEDEDQVFISPQVPIEQKHEKLDRNMWQLGLHGIKKSISINGTSFSSD Subject 2561 GNNCSLVIRPGEFFEMPRGMQNNYFHGVSNCEDGRVSMTFRRQKLEDEDQVFISPQVPIEQKHEKLDRNMWQLGLHGIKKSISINGTSFSSD 2836
Range 2: 2560 to 2835 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
217.3 bits(468) | 0.0 | 90/92(98%) | 0/92(0%) | Plus/Minus |
Query 34 SEEKLVPFIEIDFLIP*RPSCHILRSSFSCFCSMGTCGLIKT*SSSSNFWRLKVMETLPFSQLETPWK*LFCIPLGISKNSPGLITRLQLFP 309 SEEKLVPFIEIDFLIP*RPSCHILRSSFSCFCSMGTCGL+KT*SSSSNFWRLKVMETLP SQLETPWK*LFCIPLGISKNSPGLITRLQLFP Subject 2560 SEEKLVPFIEIDFLIP*RPSCHILRSSFSCFCSMGTCGLMKT*SSSSNFWRLKVMETLPSSQLETPWK*LFCIPLGISKNSPGLITRLQLFP 2835
Range 3: 2541 to 2834 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
198.6 bits(427) | 0.0 | 81/98(83%) | 0/98(0%) | Plus/Minus |
Query 35 QRKSLCHLLRLIF*FHEDLAATYCDQAFHVFAQWELVD**RLDPHLPTSGV*KSWKLSHFHNWKPHGSNYFAYLWASQRIHQA*SQDCNYSPSTQPHP 328 Q+KSLCHLLRLIF*FHEDLAATYC QAFHVFAQWELV **RLDPH PTSGV*KSWKLS HNW+ HGSNY AYLWASQRIHQA* DCNY P P Subject 2541 QKKSLCHLLRLIF*FHEDLAATYCGQAFHVFAQWELVG**RLDPHPPTSGV*KSWKLSRLHNWRLHGSNYSAYLWASQRIHQA*LPDCNYFPQPNFEP 2834
Range 4: 2564 to 2833 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
192.1 bits(413) | 0.0 | 80/90(89%) | 0/90(0%) | Plus/Minus |
Query 36 RGKACAIY*D*FFNSMKT*LPHIAIKLFMFLLNGNLWTNKDLILIFQLLASESHGNSPIFTIGNPMEVIILHTSGHLKEFTRPNHKTAII 305 R KACAIY*D*FFNSMKT*LPHIA+KLFMFLLNGNLW N+DLILI QLLASESHGNSP+FTIG+ MEVIILHTSGHLKEFTRPN++TAII Subject 2564 RRKACAIY*D*FFNSMKT*LPHIAVKLFMFLLNGNLWANEDLILILQLLASESHGNSPVFTIGDSMEVIILHTSGHLKEFTRPNYQTAII 2833
Range 5: 2565 to 2834 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
177.0 bits(380) | 0.0 | 80/90(89%) | 0/90(0%) | Minus/Plus |
Query 35 IIAVL*LGLVNSLRCPEVCKIITSMGFPIVKMGEFP*LSDARSWKMRIKSLLVHKFPLSKNMKSLIAICGS*VFMELKNQSQ*MAQAFPL 304 IIAV *LGLVNSLRCPEVC+IITSM PIVK GEFP*LSDARSW+MRIKS L HKFPLSKNMKSL AICGS*VFMELKNQSQ*MAQAF L Subject 2565 IIAVW*LGLVNSLRCPEVCRIITSMESPIVKTGEFP*LSDARSWRMRIKSSLAHKFPLSKNMKSLTAICGS*VFMELKNQSQ*MAQAFLL 2834
Range 6: 2560 to 2835 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
152.3 bits(326) | 0.0 | 79/92(86%) | 0/92(0%) | Minus/Plus |
Query 34 GE*LQSCD*AW*IL*DAQRYAK*LLPWGFQL*KWESFHDFQTPEVGR*GXXXXXXXXSH*AKT*KA*SQYVAARSSWN*KINLNKWHKLFL* 309 G+*LQS +*AW*IL*DAQRYA+*LLPW QL*+ ESFHDFQTPEVG *GSSL+* TSSH*AKT*KA* QYVAARSSWN*KINLNKWHKLF * Subject 2560 GK*LQSGN*AW*IL*DAQRYAE*LLPWSLQL*RRESFHDFQTPEVGG*GSSLH*PTSSH*AKT*KA*PQYVAARSSWN*KINLNKWHKLFF* 2835
Grapevine rupestris stem pitting associated virus isolate SK704 A, complete genome
Sequence ID: KX274274.1 Length: 8725 Number of Matches: 6
Range 1: 2560 to 2835 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.0 bits(489) | 0.0 | 91/92(99%) | 0/92(0%) | Minus/Plus |
Query 33 GNNCSLVIRPGEFFEMPRGMQNNYFHGVSNCENGRVSMTFRRQKLEDEDQVFISPQVPIEQKHEKLDRNMWQLGLHGIKKSISINGTSFSSD 308 GNNCSLVIRPGEFFEMPRGMQNNYFHGVSNCENGRVSMTFRRQKLEDE+QVFISPQVPIEQKHEKLDRNMWQLGLHGIKKSISINGTSFSSD Subject 2560 GNNCSLVIRPGEFFEMPRGMQNNYFHGVSNCENGRVSMTFRRQKLEDENQVFISPQVPIEQKHEKLDRNMWQLGLHGIKKSISINGTSFSSD 2835
Range 2: 2540 to 2833 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
222.4 bits(479) | 0.0 | 88/98(90%) | 0/98(0%) | Plus/Minus |
Query 35 QRKSLCHLLRLIF*FHEDLAATYCDQAFHVFAQWELVD**RLDPHLPTSGV*KSWKLSHFHNWKPHGSNYFAYLWASQRIHQA*SQDCNYSPSTQPHP 328 QR+SLCHLLRLIF*FHEDLAATYCDQAFHVFAQWELVD**RLD HLPTSGV*KSWKLSHFHNWKPHGSNYFAYLWASQ+IHQA* QDCNY P P Subject 2540 QRRSLCHLLRLIF*FHEDLAATYCDQAFHVFAQWELVD**RLDSHLPTSGV*KSWKLSHFHNWKPHGSNYFAYLWASQKIHQA*LQDCNYFPQPNSGP 2833
Range 3: 2559 to 2834 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
219.6 bits(473) | 0.0 | 91/92(99%) | 0/92(0%) | Plus/Minus |
Query 34 SEEKLVPFIEIDFLIP*RPSCHILRSSFSCFCSMGTCGLIKT*SSSSNFWRLKVMETLPFSQLETPWK*LFCIPLGISKNSPGLITRLQLFP 309 SEEKLVPFIEIDFLIP*RPSCHILRSSFSCFCSMGTCGLIKT* SSSNFWRLKVMETLPFSQLETPWK*LFCIPLGISKNSPGLITRLQLFP Subject 2559 SEEKLVPFIEIDFLIP*RPSCHILRSSFSCFCSMGTCGLIKT*FSSSNFWRLKVMETLPFSQLETPWK*LFCIPLGISKNSPGLITRLQLFP 2834
Range 4: 2563 to 2832 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
205.4 bits(442) | 0.0 | 86/90(96%) | 0/90(0%) | Plus/Minus |
Query 36 RGKACAIY*D*FFNSMKT*LPHIAIKLFMFLLNGNLWTNKDLILIFQLLASESHGNSPIFTIGNPMEVIILHTSGHLKEFTRPNHKTAII 305 RG+ACAIY*D*FFNSMKT*LPHIAIKLFMFLLNGNLWT+KDLILIFQLLASESHGNSPIFTIGNPMEVIILHTSGHLK+FTRPN+KTAII Subject 2563 RGEACAIY*D*FFNSMKT*LPHIAIKLFMFLLNGNLWTDKDLILIFQLLASESHGNSPIFTIGNPMEVIILHTSGHLKKFTRPNYKTAII 2832
Range 5: 2564 to 2833 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.9 bits(419) | 0.0 | 87/90(97%) | 0/90(0%) | Minus/Plus |
Query 35 IIAVL*LGLVNSLRCPEVCKIITSMGFPIVKMGEFP*LSDARSWKMRIKSLLVHKFPLSKNMKSLIAICGS*VFMELKNQSQ*MAQAFPL 304 IIAVL*LGLVN LRCPEVCKIITSMGFPIVKMGEFP*LSDARSWKMRIKSL VHKFPLSKNMKSLIAICGS*VFMELKNQSQ*MAQA PL Subject 2564 IIAVL*LGLVNFLRCPEVCKIITSMGFPIVKMGEFP*LSDARSWKMRIKSLSVHKFPLSKNMKSLIAICGS*VFMELKNQSQ*MAQASPL 2833
Range 6: 2559 to 2834 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
173.4 bits(372) | 0.0 | 86/92(93%) | 0/92(0%) | Minus/Plus |
Query 34 GE*LQSCD*AW*IL*DAQRYAK*LLPWGFQL*KWESFHDFQTPEVGR*GXXXXXXXXSH*AKT*KA*SQYVAARSSWN*KINLNKWHKLFL* 309 G+*LQSC+*AW*I *DAQRYAK*LLPWGFQL*KWESFHDFQTPEVGR* SSLY STSSH*AKT*KA*SQYVAARSSWN*KINLNKWHKL L* Subject 2559 GK*LQSCN*AW*IF*DAQRYAK*LLPWGFQL*KWESFHDFQTPEVGR*ESSLYQSTSSH*AKT*KA*SQYVAARSSWN*KINLNKWHKLLL* 2834
Grapevine rupestris stem pitting associated virus isolate VF1, partial genome
Sequence ID: KT948710.1 Length: 8716 Number of Matches: 6
Range 1: 2561 to 2836 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
219.6 bits(473) | 0.0 | 88/92(96%) | 0/92(0%) | Minus/Plus |
Query 33 GNNCSLVIRPGEFFEMPRGMQNNYFHGVSNCENGRVSMTFRRQKLEDEDQVFISPQVPIEQKHEKLDRNMWQLGLHGIKKSISINGTSFSSD 308 GN C+LVIRPGEFFEMPRGMQNNYFHGVSNCE+GRVSMTFRRQKLEDEDQVFISPQVPIEQ HEKLDRNMWQLGLHGIKKSISINGTSFSSD Subject 2561 GNYCNLVIRPGEFFEMPRGMQNNYFHGVSNCEDGRVSMTFRRQKLEDEDQVFISPQVPIEQNHEKLDRNMWQLGLHGIKKSISINGTSFSSD 2836
Range 2: 2560 to 2835 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
207.3 bits(446) | 0.0 | 87/92(95%) | 0/92(0%) | Plus/Minus |
Query 34 SEEKLVPFIEIDFLIP*RPSCHILRSSFSCFCSMGTCGLIKT*SSSSNFWRLKVMETLPFSQLETPWK*LFCIPLGISKNSPGLITRLQLFP 309 S+EKLVPFIEIDFLIP*RPSCHILRSSFS FCSMGTCGL+KT*SSSSNFWRLKVMETLP SQLETPWK*LFCIPLGISKNSPGLITRLQ FP Subject 2560 SDEKLVPFIEIDFLIP*RPSCHILRSSFSWFCSMGTCGLMKT*SSSSNFWRLKVMETLPSSQLETPWK*LFCIPLGISKNSPGLITRLQ*FP 2835
Range 3: 2541 to 2834 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
188.9 bits(406) | 0.0 | 77/98(79%) | 0/98(0%) | Plus/Minus |
Query 35 QRKSLCHLLRLIF*FHEDLAATYCDQAFHVFAQWELVD**RLDPHLPTSGV*KSWKLSHFHNWKPHGSNYFAYLWASQRIHQA*SQDCNYSPSTQPHP 328 Q K+LCHLLRLIF*FHE LAATYCDQAFH FAQWELV **+LDPH PTSGV*KSWKL HNW+ HGSNYFAYLWASQRIHQ *S DCN P P Subject 2541 QMKNLCHLLRLIF*FHEGLAATYCDQAFHGFAQWELVG**KLDPHPPTSGV*KSWKLYRLHNWRLHGSNYFAYLWASQRIHQV*SPDCNNFPQPNFEP 2834
Range 4: 2564 to 2833 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
172.9 bits(371) | 0.0 | 74/90(82%) | 0/90(0%) | Plus/Minus |
Query 36 RGKACAIY*D*FFNSMKT*LPHIAIKLFMFLLNGNLWTNKDLILIFQLLASESHGNSPIFTIGNPMEVIILHTSGHLKEFTRPNHKTAII 305 R K CAIY*D*FFNSMK *LPHIAIKLFM LLNGNLW N++LILI QLLAS+SHGNS +FTIG+ MEVIILHTSGHLKEFTR NH+ AII Subject 2564 R*KTCAIY*D*FFNSMKA*LPHIAIKLFMVLLNGNLWANENLILILQLLASKSHGNSTVFTIGDSMEVIILHTSGHLKEFTRSNHQIAII 2833
Range 5: 2565 to 2834 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
161.4 bits(346) | 0.0 | 74/90(82%) | 0/90(0%) | Minus/Plus |
Query 35 IIAVL*LGLVNSLRCPEVCKIITSMGFPIVKMGEFP*LSDARSWKMRIKSLLVHKFPLSKNMKSLIAICGS*VFMELKNQSQ*MAQAFPL 304 IIA+ *L LVNSLRCPEVCKIITSM PIVK EFP*L DARSW+MRIK L HKFPLSK MKSLIAICGS* FMELKNQSQ*MAQ F L Subject 2565 IIAIW*LDLVNSLRCPEVCKIITSMESPIVKTVEFP*LLDARSWRMRIKFSLAHKFPLSKTMKSLIAICGS*AFMELKNQSQ*MAQVFHL 2834
Range 6: 2560 to 2835 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
140.4 bits(300) | 0.0 | 74/92(80%) | 0/92(0%) | Minus/Plus |
Query 34 GE*LQSCD*AW*IL*DAQRYAK*LLPWGFQL*KWESFHDFQTPEVGR*GXXXXXXXXSH*AKT*KA*SQYVAARSSWN*KINLNKWHKLFL* 309 G+ LQS D* W*IL*DAQRYAK*LLPW QL*+ SFHDF TPEVG *GSS +* TSSH*AK *KA*SQYVAAR SWN*KINLNKWHK F+* Subject 2560 GKLLQSGD*TW*IL*DAQRYAK*LLPWSLQL*RR*SFHDF*TPEVGG*GSSFH*PTSSH*AKP*KA*SQYVAARPSWN*KINLNKWHKFFI* 2835
Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome
Sequence ID: KR054734.1 Length: 8753 Number of Matches: 6
Range 1: 2560 to 2835 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
215.1 bits(463) | 0.0 | 84/92(91%) | 0/92(0%) | Minus/Plus |
Query 33 GNNCSLVIRPGEFFEMPRGMQNNYFHGVSNCENGRVSMTFRRQKLEDEDQVFISPQVPIEQKHEKLDRNMWQLGLHGIKKSISINGTSFSSD 308 GNNCSLVI+PGEFFEMPRGMQ +YFHGVSNCE+GR+SMTFRRQ+LEDE+QVFISPQVPIEQ+HEKLDRNMWQLGLHGIKKSISINGTSFSSD Subject 2560 GNNCSLVIKPGEFFEMPRGMQKDYFHGVSNCESGRISMTFRRQRLEDENQVFISPQVPIEQRHEKLDRNMWQLGLHGIKKSISINGTSFSSD 2835
Range 2: 2559 to 2834 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.9 bits(419) | 0.0 | 80/92(87%) | 0/92(0%) | Plus/Minus |
Query 34 SEEKLVPFIEIDFLIP*RPSCHILRSSFSCFCSMGTCGLIKT*SSSSNFWRLKVMETLPFSQLETPWK*LFCIPLGISKNSPGLITRLQLFP 309 SEEKLVP IEIDF IP*RPSCH+LRSSFSC CS+GTCGLIKT* SSSN WRLKV+E LP SQLETPWK* FCIPLGISKNSPGLIT+LQLFP Subject 2559 SEEKLVPLIEIDFFIP*RPSCHMLRSSFSCLCSIGTCGLIKT*FSSSNLWRLKVIEILPLSQLETPWK*SFCIPLGISKNSPGLITKLQLFP 2834
Range 3: 2563 to 2832 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
148.6 bits(318) | 0.0 | 63/90(70%) | 0/90(0%) | Plus/Minus |
Query 36 RGKACAIY*D*FFNSMKT*LPHIAIKLFMFLLNGNLWTNKDLILIFQLLASESHGNSPIFTIGNPMEVIILHTSGHLKEFTRPNHKTAII 305 R +AC I *+*FF SMKT*LPH+AI+LFM LLN NLW NK+LILIFQ LA +SH NSP FTIG+ ME+I LHTSGH +EF+R NH+TAI+ Subject 2563 RREACTID*N*FFYSMKT*LPHVAIELFMSLLNRNLWANKNLILIFQSLAPKSHRNSPAFTIGDSMEIIFLHTSGHFEEFSRLNHQTAIV 2832
Range 4: 2558 to 2833 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
140.8 bits(301) | 0.0 | 62/92(67%) | 0/92(0%) | Plus/Minus |
Query 35 QRKSLCHLLRLIF*FHEDLAATYCDQAFHVFAQWELVD**RLDPHLPTSGV*KSWKLSHFHNWKPHGSNYFAYLWASQRIHQA*SQDCNYSP 310 Q++SL H L+LIF FHEDLAAT CD+AFHVFAQ ELV **+LD HLP G *KS K S FHNW+ HG+N AYLWA +RI QA*S +CN P Subject 2558 QKRSLYH*LKLIFLFHEDLAATCCDRAFHVFAQ*ELVG**KLDSHLPIFGA*KS*KFSRFHNWRLHGNNLSAYLWAFRRILQA*SPNCNCFP 2833
Range 5: 2567 to 2824 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.9 bits(264) | 0.0 | 60/86(70%) | 0/86(0%) | Minus/Plus |
Query 44 IAVL*LGLVNSLRCPEVCKIITSMGFPIVKMGEFP*LSDARSWKMRIKSLLVHKFPLSKNMKSLIAICGS*VFMELKNQSQ*MAQA 301 IAV *L L NS +CPEVC+ I SM PIVK GEF *L A+ WKMRIK LL HKF LSK+MKS IA CGS*VFME KNQ Q M QA Subject 2567 IAVW*LSLENSSKCPEVCRKIISMESPIVKAGEFL*LLGAKDWKMRIKFLLAHKFLLSKDMKSSIATCGS*VFME*KNQFQSMVQA 2824
Range 6: 2559 to 2834 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
110.1 bits(234) | 0.0 | 61/92(66%) | 0/92(0%) | Minus/Plus |
Query 34 GE*LQSCD*AW*IL*DAQRYAK*LLPWGFQL*KWESFHDFQTPEVGR*GXXXXXXXXSH*AKT*KA*SQYVAARSSWN*KINLNKWHKLFL* 309 G+ LQ D*AW IL +AQRYA+ L PW QL*K E+F+DF P++GR* SS Y* TSS+*AKT*KA SQ+VAARSSWN KIN N+W+KL * Subject 2559 GKQLQFGD*AWRILRNAQRYAERLFPWSLQL*KRENFYDF*APKIGR*ESSFY*PTSSY*AKT*KARSQHVAARSSWNKKINFNQWYKLLF* 2834
Rupestris stem pitting associated virus isolate RSPaV PN, complete genome
Sequence ID: AY368172.2 Length: 8743 Number of Matches: 6
Range 1: 2560 to 2835 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
211.8 bits(456) | 0.0 | 82/92(89%) | 0/92(0%) | Minus/Plus |
Query 33 GNNCSLVIRPGEFFEMPRGMQNNYFHGVSNCENGRVSMTFRRQKLEDEDQVFISPQVPIEQKHEKLDRNMWQLGLHGIKKSISINGTSFSSD 308 GNNCSL +RPGEFFEMPRGMQ+NYFHG+SNCE GRVSMTFRRQKLED+D VFISPQVPIEQ+HEKLDRNMWQLGLHGIKKSI+ING+SFSSD Subject 2560 GNNCSLEVRPGEFFEMPRGMQSNYFHGISNCEGGRVSMTFRRQKLEDDDPVFISPQVPIEQRHEKLDRNMWQLGLHGIKKSIAINGSSFSSD 2835
Range 2: 2559 to 2834 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
183.4 bits(394) | 0.0 | 78/92(85%) | 0/92(0%) | Plus/Minus |
Query 34 SEEKLVPFIEIDFLIP*RPSCHILRSSFSCFCSMGTCGLIKT*SSSSNFWRLKVMETLPFSQLETPWK*LFCIPLGISKNSPGLITRLQLFP 309 SEEKL P I IDFLIP*RPSCHILRSSFSC CSMGTCGL+KT SSSSNFWRLKV++TLP SQLE P K*L CIPLGISKNSPGL +RLQLFP Subject 2559 SEEKLEPLIAIDFLIP*RPSCHILRSSFSCLCSMGTCGLMKTGSSSSNFWRLKVIDTLPPSQLEIP*K*LLCIPLGISKNSPGLTSRLQLFP 2834
Range 3: 2561 to 2833 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
133.0 bits(284) | 0.0 | 63/91(69%) | 0/91(0%) | Plus/Minus |
Query 35 QRKSLCHLLRLIF*FHEDLAATYCDQAFHVFAQWELVD**RLDPHLPTSGV*KSWKLSHFHNWKPHGSNYFAYLWASQRIHQA*SQDCNYS 307 QRK+L H L+L *FHEDLAATY DQ HVFA+W LV **RLD H P GV*KS L HNWK H SN AY ASQRIHQA* QDCNYS Subject 2561 QRKNLSH*LQLTS*FHEDLAATYYDQVSHVFARWGLVG**RLDHHPPIFGV*KSSTLFRPHNWKSHESNCSAYP*ASQRIHQA*PQDCNYS 2833
Range 4: 2560 to 2832 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
131.7 bits(281) | 0.0 | 59/91(65%) | 0/91(0%) | Plus/Minus |
Query 36 RGKACAIY*D*FFNSMKT*LPHIAIKLFMFLLNGNLWTNKDLILIFQLLASESHGNSPIFTIGNPMEVIILHTSGHLKEFTRPNHKTAIIP 308 RGK AI +* NSMKT*LPHI IK M LL+G+LW ++D I+I Q LAS+SH +S TIGNPM+VI LHT HLKEFTRP+ KTAIIP Subject 2560 RGKT*AIDCN*LLNSMKT*LPHITIKFLMSLLDGDLWADEDWIIILQFLASKSHRHSSALTIGNPMKVIALHTPRHLKEFTRPDLKTAIIP 2832
Range 5: 2561 to 2833 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
129.4 bits(276) | 0.0 | 59/91(65%) | 0/91(0%) | Minus/Plus |
Query 35 GIIAVL*LGLVNSLRCPEVCKIITSMGFPIVKMGEFP*LSDARSWKMRIKSLLVHKFPLSKNMKSLIAICGS*VFMELKNQSQ*MAQAFPL 307 GIIAVL GLVNSLRC VC+ IT MGFPIV+ E *L DA++W+M I+S HK P SK+M++LI ICGS*VFMEL++Q Q MAQ FPL Subject 2561 GIIAVLRSGLVNSLRCLGVCRAITFMGFPIVRAEECR*LLDAKNWRMMIQSSSAHKSPSSKDMRNLIVICGS*VFMELRSQLQSMAQVFPL 2833
Range 6: 2562 to 2834 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
96.8 bits(205) | 0.0 | 58/91(64%) | 0/91(0%) | Minus/Plus |
Query 34 E*LQSCD*AW*IL*DAQRYAK*LLPWGFQL*KWESFHDFQTPEVGR*GXXXXXXXXSH*AKT*KA*SQYVAARSSWN*KINLNKWHKLFL* 306 E*LQS AW*IL*DA YA+ LL W FQL* +S DF TP++G * SSL+ TS H AKT*+ *S YVAARSSWN*++N N+W K FL* Subject 2562 E*LQS*GQAW*IL*DA*GYAEQLLSWDFQL*GRKSVDDF*TPKIGG**SSLHQPTSPHRAKT*ET*S*YVAARSSWN*EVNCNQWLKFFL* 2834
Nucleotide Sequence (1316 letters)
Query ID: | ds2016-133_14 |
Query definition: | No definition line |
Query length: | 603 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
1030.7 | 5224.0 | 37% | 0 | 85% | KX274275.1 | |
1027.5 | 5357.8 | 36% | 0 | 87% | AY368590.1 | |
1004.5 | 4525.7 | 36% | 0 | 65% | KR528585.1 | |
1000.0 | 3407.2 | 35% | 0 | 51% | KR054734.1 | |
994.0 | 3298.9 | 39% | 0 | 43% | KX274274.1 |
Alignments
Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome
Sequence ID: KX274275.1 Length: 8724 Number of Matches: 9
Range 1: 3322 to 4635 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1030.7 bits(2243) | 0.0 | 429/438(98%) | 0/438(0%) | Minus/Plus |
Query 2 LSTDGLALKAGIRSFVESESTVDPALSSLTIQKQLGENAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVEVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLVEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMT 1315 LSTDGLALKAGIRSFVESES VDPALS TI+KQLGENAYAENEMIALFC+RHHVRLIIITPEYEVSWKFGE+EWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREV+VLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMD+ECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRL+EGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMT Subject 3322 LSTDGLALKAGIRSFVESESPVDPALSGPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMT 4635
Range 2: 3322 to 4635 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
875.8 bits(1905) | 0.0 | 380/438(87%) | 0/438(0%) | Plus/Minus |
Query 2 SHGAFFEVTG*S*IKHWIYEPPTLQVVPI*LSFDQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*INVTRGE*LNFIKDHAMTSL*ACNFSKKDFKGNDIPTLLL*FACLHHLTLIIHFQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCAKHDCQFSLFDVRSRHSSKPRF*IIKFLITYHAS*TSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPVTNLFDMPNVFIRYVKQSRYAPAWINNLNFTIDITFGTDVESFKSFC*IHHVQTPPLT*FFKNVIGAGST*VIKNLYLTPSKC*CNSCDHAAIKRGTRLEMIGL*TQNST*GPLTFPKLPAHLIFWCYNDQPHMMPNAE*SNHFILCVSIFXXXXXXXXXXXXWVNC*LTFHKRPYSCLQS*TICAK 1315 SHGAFFEVTG*S*IKHWIY+P LQVVPI*LSF+QPQYVTLF TQNSSIFLRIICALTRITSKRDESVTA+NKKT*I+VTR E*LNFIKDHAMTSL*ACNF K+DFKGN+IP LLL*FACLHHLTL IHF VPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKC KH+CQFSLFDVRS HSSKPR *I+KFLITYHAS TSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPVTNLFDMPNVFIRYVKQSRYAPAWINNLNF+IDITFGTDVES KSF IHH+QTPPLT* FKNVIGA T +I+++YLTPSKC*CN C+HAAIKRGTRL+MI L TQNST* PL FPKLPAHLIFWCYN+Q HM+PNAE* NHFI CVSIF+KLL Y A KSW+N * TFH+RPYSCLQS T+ A+ Subject 3322 SHGAFFEVTG*S*IKHWIYKPSALQVVPI*LSFEQPQYVTLFGTQNSSIFLRIICALTRITSKRDESVTADNKKT*IDVTRRE*LNFIKDHAMTSL*ACNFPKEDFKGNNIPALLL*FACLHHLTLFIHF*VPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCTKHNCQFSLFDVRS*HSSKPRL*IVKFLITYHASQTSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPVTNLFDMPNVFIRYVKQSRYAPAWINNLNFSIDITFGTDVESLKSFRQIHHIQTPPLT*LFKNVIGAWPTQIIEHVYLTPSKC*CNGCNHAAIKRGTRLKMI*LQTQNST*RPLIFPKLPAHLIFWCYNNQSHMVPNAE*GNHFIFCVSIFTKLLPYGWARKSWINW*FTFHERPYSCLQSQTVGAE 4635
Range 3: 3327 to 4634 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
851.5 bits(1852) | 0.0 | 376/436(86%) | 0/436(0%) | Minus/Plus |
Query 3 HRWSSFEGRNKVVCGK*VNS*PSSFKPNYTEATWRKCLRRE*NDCFILH*ASCEADHYNTRI*GELEVWGK*VAPMWNSVFKVQSFPTLCPS*WLHDHSYCISTWKA*GRGS*LLM*TQHQSHF*RTMSRGGSEHDVFSRSF*SFRHLCQM*CQW*N*GY*SRRAHICSV*HNE*TH*ACRKDW*RASKYKGG*AAKS*TISS*PAFFERVKDNIFSKF*AGGKTSGVLAGRFNWRDK**EI**FKTLACWSVYF*HQTKRIDSRAWHIWGWKEFPIQELHEEI*RKICNICLT*AGSSKFNQKGPGNG**V*GGEGRQIKEGGLGCRYL*SLS*KSYRPKGWSLRDL**SSAIPPWLH*SMSSCYSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEAGRRKVI*VQLGESEVRKSNV*FKITL*LQKRLHD 1310 HR FEGRNKVV GK*+ S* SSF PN+TEATW KCLRR+*NDC IL *A CE D+YNTRI*GELEVWGK*VA MWN VF+V+SF LCPS*WLHD+S+CISTWKA*GR + L +* +HQSHF*R MS GGSE+DVF SF* FRHLCQM*CQW N*GY*SRRAHICSV*HNE*TH*ACRKDW*RASKYKGG*AAKS*TISS*PAF ERVKDNIFSKF* GGKTSGVLAGRF+WRDK**EI* FK LACWSV F*HQTKRIDS AW+IWGWKEFPIQELHEEI*RKICNICLT*AGSSKFNQKGP NG* V*GGEGRQIKEGGLGC YL*SL *+SYRPKGWSLRDL**SSAIP WLH SMSSCY Q*RFHLSCW*SLSKHI*FSKR*SYFGC TE*HIE RRKVI*VQLGE +V KSNV*FKITL*LQKRLHD Subject 3327 HRRFGFEGRNKVVRGK*ITS*SSSFGPNHTEATW*KCLRRK*NDCLILR*APCETDYYNTRI*GELEVWGK*VASMWNFVFEVKSFSALCPS*WLHDYSHCISTWKA*GRRAQLFV*AKHQSHF*RAMSGGGSEYDVFGGSF*GFRHLCQM*CQWRN*GY*SRRAHICSV*HNE*TH*ACRKDW*RASKYKGG*AAKS*TISS*PAFSERVKDNIFSKF*EGGKTSGVLAGRFDWRDK**EI*RFKALACWSVNF*HQTKRIDSCAWYIWGWKEFPIQELHEEI*RKICNICLT*AGSSKFNQKGPRNG*RV*GGEGRQIKEGGLGCCYL*SLP*ESYRPKGWSLRDL**SSAIPSWLHRSMSSCYPQ*RFHLSCW*SLSKHI*FSKR*SYFGCRTE*HIEVARRKVI*VQLGEPKVCKSNV*FKITL*LQKRLHD 4634
Range 4: 3462 to 4634 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
814.4 bits(1771) | 0.0 | 377/391(96%) | 0/391(0%) | Plus/Minus |
Query 3 VMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSTSLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHXXXXXXXXXXEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSARSKLGKYVIFDPFKESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQMXXXXXXXXXYIMFRPPP*HSSSKM*LVLGLHK*LRTSTSRLPSADAIAVIMQPLRGAQGWK*LDFKHRIPHRGHSLSPNFQLTSYSGVIMISLT*CLMQNK 1175 VMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPS++LNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHSSSISRSLLIEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSA SKLGKYVIFDPF+ESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQMSKASKASAKYI+FRPPP*HSSSKM*LVLGLHK*L TSTSRLPSADA+AVIMQPLRGAQG K* DFKH+IPHRGHS SPNFQLTSYSGVI+ISLT CL QNK Subject 3462 VMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSNLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHSSSISRSLLIEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSALSKLGKYVIFDPFRESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQMSKASKASAKYIIFRPPP*HSSSKM*LVLGLHK*LSTSTSRLPSADAMAVIMQPLRGAQG*K*FDFKHKIPHRGHSFSPNFQLTSYSGVIIISLTWCLTQNK 4634
Range 5: 3321 to 3401 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
58.3 bits(121) | 0.0 | 25/27(93%) | 0/27(0%) | Plus/Minus |
Query 1236 ERAGSTVDSLSTNDLIPAFKARPSVLR 1316 ERAGST DSLSTNDLIPAFKA+PSVLR Subject 3321 ERAGSTGDSLSTNDLIPAFKAKPSVLR 3401
Range 6: 3323 to 4636 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
843.7 bits(1835) | 0.0 | 379/438(87%) | 0/438(0%) | Plus/Minus |
Query 1 QSWSLF*SYRVILNQTLDLRTSDSPSCTYMTFLRPASICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDQCNQGGIAELHQRSRNDQPLGL*LF*ERLQR*RHPNPPSLICLPSPPYTHHPFPGPF*LNLLEPA*VRQMLQIFLQIXXXXXCIGNSFQPQMCQARLSILFV*CQK*TLQQAKVLNH*ISHHLSRQLNLPASTPEVFPPAQNLENMLSLTRSKKAGQELIV*LFAAHPPLYFEARYQSFRHA*CVHSLCQTEQICARLD**PQFXXXXXIWHRCRKLQKLLLNTSCSDPPLDIVLQKCDWCWVYISN*EPLPHAFQVLMQ*L*SCSH*EGHKVGNDWTLNTEFHIGATHFPQTSSSPHILVL**SASHDA*CRIKQSFHSLRKHFLQVASV*LGLKELGQLLTHFPQTTLFLPSKLDHLC* 1314 QSWSLF*SYRVILNQTLDL+T SPSCTYMTFLR SICHSV+HPK*LYLFENHMCFDKDHQQER*KRHC *QEDID+CNQ GIAELHQRSRNDQPLGL*L * RLQR*+HP+PPSLICLPSPPYT HPF GPF*LNLLEPA*VRQMLQIFLQISS*SSCIGNSFQPQM QA+LSILFV*CQK TLQQAK LN *ISHHLSRQ NLPASTPEVFPP+QNLENMLSLTRS+KAGQELIV*LFAAHPPLYFEARYQSFRHA*CVHSLCQTEQICARLD**PQF H*HHIWHRCRK QKL NTS SDPP DI LQKCDWC Y +N* LPHAFQVLMQ L*SCSH*EGHK ND T NT+FHI ATHFPQTSSSPHILVL**S SH A* RI+QSFH LRKHF QVASV LG KEL QL+ HFP+TTLFLPSK + C* Subject 3323 QSWSLF*SYRVILNQTLDLQTFGSPSCTYMTFLRATSICHSVRHPK*LYLFENHMCFDKDHQQER*KRHCG*QEDIDRCNQEGIAELHQRSRNDQPLGL*LS*GRLQR*QHPSPPSLICLPSPPYTLHPFLGPF*LNLLEPA*VRQMLQIFLQISS*SSCIGNSFQPQMYQAQLSILFV*CQKLTLQQAKALNR*ISHHLSRQSNLPASTPEVFPPSQNLENMLSLTRSEKAGQELIV*LFAAHPPLYFEARYQSFRHA*CVHSLCQTEQICARLD**PQFLH*HHIWHRCRKPQKLPPNTSYSDPPPDIALQKCDWCLAYTNN*ARLPHAFQVLMQWL*SCSH*EGHKAENDLTSNTKFHIEATHFPQTSSSPHILVL**SVSHGA*RRIRQSFHFLRKHFHQVASVWLGPKELDQLVIHFPRTTLFLPSKPNRRC* 4636
Range 7: 3326 to 4189 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
512.4 bits(1112) | 0.0 | 244/288(85%) | 0/288(0%) | Minus/Plus |
Query 448 AQMV*L*RQE*GRLWKVSQQLTQLFQA*LYRSNLEKMLTQRMK*LLYSALGIM*G*SL*HQNMR*AGSLGKVSGPYVEFCV*SPIISNLVPLLMAA*SQLLHQHLEGVR*RFLITYVDPAPITFLKNYVKGGV*T*CI*QKLLKLSTSVPNVMSMVKLRLLIQAGAYLLCLT*RMNTLGMSKRLVTGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLSGRKNFRGACWEV*LA**VMRNLMIQNLGLLECLLLTSNKEN*QSCLAHLGLERVSYTRAS*RDLKEN 1311 A V L*RQE*GR WKV+ QL QLF+A Y SNL KMLTQ+MK*L YSALG M* * L*HQNMR*AGSLGK+SG YVEFCV*S II +LVPLLMAA* Q LHQHLEGVR* I V APITFLK+YV+GGV* *CI +KLL+LSTSVPNVMSM KLRLLIQAGAYLLCLT*RMNTLGMSKRLVTGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVL GRKNFRGACWEV*LA**VMRNL IQ+LGLLEC LLTSNKEN*Q CL HLGLERVSYTRAS*RDLKEN Subject 3326 APTVWL*RQE*GRSWKVNHQLIQLFRAQPYGSNLVKMLTQKMK*LPYSALGTM*D*LL*HQNMR*AGSLGKMSGLYVEFCV*SQIIFSLVPLLMAA*LQPLHQHLEGVR*TCSIICVGQAPITFLKSYVRGGV*I*CIWRKLLRLSTSVPNVMSMEKLRLLIQAGAYLLCLT*RMNTLGMSKRLVTGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLRGRKNFRGACWEV*LA**VMRNLTIQSLGLLECQLLTSNKEN*QLCLVHLGLERVSYTRAS*RDLKEN 4189
Range 8: 4466 to 4636 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
121.1 bits(258) | 0.0 | 52/57(91%) | 0/57(0%) | Minus/Plus |
Query 1 KAHMILKKIELFWVLNRVTY*GWSKESHIGTTWRVGGS*IQCLIQDYPVTSKKAP*L 171 KAHMILKKIELFWV NRVTY*G SKESHIGTTWR G *IQCLIQDYPVTSKKAP*L Subject 4466 KAHMILKKIELFWVPNRVTY*GCSKESHIGTTWRAEGL*IQCLIQDYPVTSKKAP*L 4636
Range 9: 4223 to 4411 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
116.1 bits(247) | 0.0 | 55/63(87%) | 0/63(0%) | Minus/Plus |
Query 226 QIQSKGTWKWMMSVRW*RQANQRRRVGMSLPLKSFLEKLQA*RLVIA*SLMKFSYSPLVTLIY 414 QIQSKGT KWM SVRW*RQANQRRR GM LPLKS L KLQA*RLVIA*SLMKFSYS LVT IY Subject 4223 QIQSKGT*KWMKSVRW*RQANQRRRAGMLLPLKSSLGKLQA*RLVIA*SLMKFSYSLLVTSIY 4411
Rupestris stem pitting associated virus strain Syrah, complete genome
Sequence ID: AY368590.1 Length: 8742 Number of Matches: 9
Range 1: 3322 to 4635 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1027.5 bits(2236) | 0.0 | 428/438(98%) | 0/438(0%) | Minus/Plus |
Query 2 LSTDGLALKAGIRSFVESESTVDPALSSLTIQKQLGENAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVEVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLVEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMT 1315 LSTDGLALKAGIRSFVESES VDPALS+ TI+KQLGENAYAENEMIALFC+RHHVRLIIITPEYEVSWKFGE+EWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREV+VLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTS IKQRELTVVLGTFGAGKSFL+KSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRL+EGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMT Subject 3322 LSTDGLALKAGIRSFVESESPVDPALSNPTIRKQLGENAYAENEMIALFCVRHHVRLIIITPEYEVSWKFGENEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSGIKQRELTVVLGTFGAGKSFLHKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMT 4635
Range 2: 3322 to 4635 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
896.9 bits(1951) | 0.0 | 389/438(89%) | 0/438(0%) | Plus/Minus |
Query 2 SHGAFFEVTG*S*IKHWIYEPPTLQVVPI*LSFDQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*INVTRGE*LNFIKDHAMTSL*ACNFSKKDFKGNDIPTLLL*FACLHHLTLIIHFQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCAKHDCQFSLFDVRSRHSSKPRF*IIKFLITYHAS*TSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPVTNLFDMPNVFIRYVKQSRYAPAWINNLNFTIDITFGTDVESFKSFC*IHHVQTPPLT*FFKNVIGAGST*VIKNLYLTPSKC*CNSCDHAAIKRGTRLEMIGL*TQNST*GPLTFPKLPAHLIFWCYNDQPHMMPNAE*SNHFILCVSIFXXXXXXXXXXXXWVNC*LTFHKRPYSCLQS*TICAK 1315 SHG FEVTG*S*IKHWIYEPP LQVVPI*L F+QPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTAN+KKT*I+VTRGE*L+FIKDHAMTSL*ACNF KKDFKGNDIP LLL*FACLH+LTLIIHFQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCAKHDCQFSLFD RSRHSSKPR *I+KFLITYHAS*TSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPVTNLFDMPNVFIRYVK+SRYAPAWI+N NFTIDITF TDVES K FC IHH+QTPPLT* FK+VIGAG T*VI+++YLTPSKC*CNSC+HAAIKRGTRL+MIGL*TQNST* P PKLPAH IFW YNDQ HMMPN E* NHFI C+SIF+KLL YS *KSW+N * TFHKRPYS LQS*TICAK Subject 3322 SHGPLFEVTG*S*IKHWIYEPPALQVVPI*LPFEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANDKKT*IDVTRGE*LDFIKDHAMTSL*ACNFPKKDFKGNDIPALLL*FACLHYLTLIIHFQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCAKHDCQFSLFDARSRHSSKPRL*IVKFLITYHAS*TSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPVTNLFDMPNVFIRYVKKSRYAPAWIDNFNFTIDITFSTDVESLKRFCQIHHIQTPPLT*LFKDVIGAGPT*VIEHVYLTPSKC*CNSCNHAAIKRGTRLKMIGL*TQNST*RPFILPKLPAHFIFWRYNDQSHMMPNTE*GNHFIFCISIFTKLLPYSWV*KSWINR*FTFHKRPYSRLQS*TICAK 4635
Range 3: 3321 to 4634 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
895.5 bits(1948) | 0.0 | 391/438(89%) | 0/438(0%) | Minus/Plus |
Query 3 S*HRWSSFEGRNKVVCGK*VNS*PSSFKPNYTEATWRKCLRRE*NDCFILH*ASCEADHYNTRI*GELEVWGK*VAPMWNSVFKVQSFPTLCPS*WLHDHSYCISTWKA*GRGS*LLM*TQHQSHF*RTMSRGGSEHDVFSRSF*SFRHLCQM*CQW*N*GY*SRRAHICSV*HNE*TH*ACRKDW*RASKYKGG*AAKS*TISS*PAFFERVKDNIFSKF*AGGKTSGVLAGRFNWRDK**EI**FKTLACWSVYF*HQTKRIDSRAWHIWGWKEFPIQELHEEI*RKICNICLT*AGSSKFNQKGPGNG**V*GGEGRQIKEGGLGCRYL*SLS*KSYRPKGWSLRDL**SSAIPPWLH*SMSSCYSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEAGRRKVI*VQLGESEVRKSNV*FKITL*LQKRLHD 1316 S*HRWSSFEG NKVVCGK*+ * SSFKPNYTEATW KCL R+*NDC IL *ASCE DHYN RI* ELEVWG+*+A MWN VFKVQSF TLCPS*WLHD+SYCISTWKA*GR + LLM* QHQSH *R MSRGGSE+DVF RS * FRHLC M*CQW*N* Y SRRAHICS *HNE*TH*ACRKDW*RASKYKGG*AAKS*TISS*PAFFERVKDNIFSKF*AGGKTSGVLAGRFNWRDK**EI* FK LACWSVYF HQTKRIDSRAWHIWGWKEFP QELHEEI*RKICNICLT*AGSSKFNQKGPGNG**V*G EGRQIKEGGLGCRYL*SLS*+SYRPKGWSLRDL**S AIPPWLH SMSSC+SQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEA RR+VI*VQLGE EVRKSNV*FKITL*LQK +HD Subject 3321 S*HRWSSFEGGNKVVCGK*ITG*SSSFKPNYTEATW*KCLCRK*NDCLILC*ASCETDHYNARI*SELEVWGE*MASMWNFVFKVQSFSTLCPS*WLHDYSYCISTWKA*GRRAQLLM*AQHQSHL*RAMSRGGSEYDVFGRSV*GFRHLC*M*CQW*N*SYQSRRAHICSF*HNE*TH*ACRKDW*RASKYKGG*AAKS*TISS*PAFFERVKDNIFSKF*AGGKTSGVLAGRFNWRDK**EI*RFKALACWSVYFWHQTKRIDSRAWHIWGWKEFPTQELHEEI*RKICNICLT*AGSSKFNQKGPGNG**V*GSEGRQIKEGGLGCRYL*SLS*ESYRPKGWSLRDL**SPAIPPWLHRSMSSCHSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEAARREVI*VQLGEPEVRKSNV*FKITL*LQKGVHD 4634
Range 4: 3323 to 4636 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
883.6 bits(1922) | 0.0 | 395/438(90%) | 0/438(0%) | Plus/Minus |
Query 1 QSWSLF*SYRVILNQTLDLRTSDSPSCTYMTFLRPASICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDQCNQGGIAELHQRSRNDQPLGL*LF*ERLQR*RHPNPPSLICLPSPPYTHHPFPGPF*LNLLEPA*VRQMLQIFLQIXXXXXCIGNSFQPQMCQARLSILFV*CQK*TLQQAKVLNH*ISHHLSRQLNLPASTPEVFPPAQNLENMLSLTRSKKAGQELIV*LFAAHPPLYFEARYQSFRHA*CVHSLCQTEQICARLD**PQFXXXXXIWHRCRKLQKLLLNTSCSDPPLDIVLQKCDWCWVYISN*EPLPHAFQVLMQ*L*SCSH*EGHKVGNDWTLNTEFHIGATHFPQTSSSPHILVL**SASHDA*CRIKQSFHSLRKHFLQVASV*LGLKELGQLLTHFPQTTLFLPSKLDHLC* 1314 QSW+ F*SYRVILNQTLDLRTS SPSCTYMT LR ASICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDID+CNQGGIA LHQRSRNDQPLGL*L *ERLQR*RHP+PPSLICLPS PYTHHPFPGPF*LNLLEPA*VRQMLQIFLQISS*SSC+GNSFQPQMCQARLSILFV*CQK*TLQQAK LN *ISHHLSRQLNLPASTPEVFPPAQNLENMLSLTRSKKAGQELIV*LFAAHPPLYFEARYQSFRHA*CVHSLCQ EQICARLD** QFHH*HHI HRCRK Q LL NTS SDPPLDI LQ+CDWCW YISN* LPHAFQVLMQ*L*SCSH*EGHKV NDWTLNT+FHI A H PQTSSS HIL L**S SHDA* RI+QSFH L KHF QVASV*LGLKEL Q + HFPQTTLF PSKLDHLC* Subject 3323 QSWTPF*SYRVILNQTLDLRTSGSPSCTYMTSLRAASICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQGGIAGLHQRSRNDQPLGL*LS*ERLQR*RHPSPPSLICLPSLPYTHHPFPGPF*LNLLEPA*VRQMLQIFLQISS*SSCVGNSFQPQMCQARLSILFV*CQK*TLQQAKALNR*ISHHLSRQLNLPASTPEVFPPAQNLENMLSLTRSKKAGQELIV*LFAAHPPLYFEARYQSFRHA*CVHSLCQKEQICARLD**LQFHH*HHI*HRCRKPQTLLPNTSYSDPPLDIALQRCDWCWAYISN*ARLPHAFQVLMQ*L*SCSH*EGHKVENDWTLNTKFHIEAIHSPQTSSSLHILAL**SVSHDA*HRIRQSFHFLHKHFHQVASV*LGLKELDQPVIHFPQTTLFPPSKLDHLC* 4636
Range 5: 3462 to 4634 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
813.5 bits(1769) | 0.0 | 377/391(96%) | 0/391(0%) | Plus/Minus |
Query 3 VMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSTSLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHXXXXXXXXXXEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSARSKLGKYVIFDPFKESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQMXXXXXXXXXYIMFRPPP*HSSSKM*LVLGLHK*LRTSTSRLPSADAIAVIMQPLRGAQGWK*LDFKHRIPHRGHSLSPNFQLTSYSGVIMISLT*CLMQNK 1175 VM+PFLKLQGNLESNIGFTNLRLSKLYLYDFPS+SLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLR+TRRHRSM*PGGNS TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHSSSISRSLLIEFARARLGETNVTNFPSDLFMKLL RKLFPAPNVPSTTVNSLCLM EVDTPASQGFESLNFSSLITPVKPPSKHP*SFSARSKLGKYVIFDPFKESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMS RADMRPPGLITSISPLTSHLAQMSKAS ASAKYI+FRPPP*HSSSKM*LVLGLHK*L TSTSRLPSADAIAVIMQPLRGAQG K*LDFKH+IPHRGHS SPNFQLTSYSGVIMISLT*CL QNK Subject 3462 VMDPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSSLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRMTRRHRSM*PGGNSWTSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHSSSISRSLLIEFARARLGETNVTNFPSDLFMKLLCRKLFPAPNVPSTTVNSLCLMPEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSARSKLGKYVIFDPFKESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSKRADMRPPGLITSISPLTSHLAQMSKASNASAKYIIFRPPP*HSSSKM*LVLGLHK*LSTSTSRLPSADAIAVIMQPLRGAQG*K*LDFKHKIPHRGHSFSPNFQLTSYSGVIMISLT*CLTQNK 4634
Range 6: 3321 to 3410 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
60.6 bits(126) | 0.0 | 27/30(90%) | 0/30(0%) | Plus/Minus |
Query 1227 VRLERAGSTVDSLSTNDLIPAFKARPSVLR 1316 V ERAGST DSLSTNDLIPAFKARPSVLR Subject 3321 VGFERAGSTGDSLSTNDLIPAFKARPSVLR 3410
Range 7: 3323 to 4189 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
529.8 bits(1150) | 0.0 | 250/289(87%) | 0/289(0%) | Minus/Plus |
Query 448 LAQMV*L*RQE*GRLWKVSQQLTQLFQA*LYRSNLEKMLTQRMK*LLYSALGIM*G*SL*HQNMR*AGSLGKVSGPYVEFCV*SPIISNLVPLLMAA*SQLLHQHLEGVR*RFLITYVDPAPITFLKNYVKGGV*T*CI*QKLLKLSTSVPNVMSMVKLRLLIQAGAYLLCLT*RMNTLGMSKRLVTGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLSGRKNFRGACWEV*LA**VMRNLMIQNLGLLECLLLTSNKEN*QSCLAHLGLERVSYTRAS*RDLKEN 1314 LAQMV*L*R+E*GRLWKV+ +L QLFQ LY SNL KML Q+MK*L YS LGIM* *SL* QNM+*AGSLG+++G YVEFCV*SPII NLVPLLMAA* QLLHQHLEGVR* ITYV PAPIT LK+YVKGGV* *CI QK L+LSTSV NVMSMVKL+L IQAGAYLL LT*RMNTLGMSKRLVTGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLSGRKNFRGACWEV*LA**VMRNL IQ+LGLLECLLL SNKEN*QSCLAHLGLERVSYTRAS*RDLKEN Subject 3323 LAQMV*L*RRE*GRLWKVNHRLIQLFQTQLYGSNLVKMLMQKMK*LPYSVLGIM*D*SL*RQNMK*AGSLGRMNGLYVEFCV*SPIIFNLVPLLMAA*LQLLHQHLEGVR*TCSITYVGPAPITSLKSYVKGGV*I*CIWQKRLRLSTSVLNVMSMVKLKLSIQAGAYLLFLT*RMNTLGMSKRLVTGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLSGRKNFRGACWEV*LA**VMRNLTIQSLGLLECLLLASNKEN*QSCLAHLGLERVSYTRAS*RDLKEN 4189
Range 8: 4223 to 4411 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
126.2 bits(269) | 0.0 | 58/63(92%) | 0/63(0%) | Minus/Plus |
Query 226 QIQSKGTWKWMMSVRW*RQANQRRRVGMSLPLKSFLEKLQA*RLVIA*SLMKFSYSPLVTLIY 414 QIQSKGTWKWMMSVR *RQANQRRR GMSLPLKSFL KLQA*RLVIA*SLMK SYSPLVT IY Subject 4223 QIQSKGTWKWMMSVR**RQANQRRRAGMSLPLKSFLGKLQA*RLVIA*SLMKSSYSPLVTSIY 4411
Range 9: 4466 to 4636 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
124.3 bits(265) | 0.0 | 52/57(91%) | 0/57(0%) | Minus/Plus |
Query 1 KAHMILKKIELFWVLNRVTY*GWSKESHIGTTWRVGGS*IQCLIQDYPVTSKKAP*L 171 KAHMILKKIELFWVLNRVTY*G SK SHIGTTWR GGS*IQCLIQDYPVTSK+ P*L Subject 4466 KAHMILKKIELFWVLNRVTY*GCSKGSHIGTTWRAGGS*IQCLIQDYPVTSKRGP*L 4636
Grapevine rupestris stem pitting associated virus isolate Tannat Rspav1, complete genome
Sequence ID: KR528585.1 Length: 8595 Number of Matches: 9
Range 1: 3304 to 4617 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1004.5 bits(2186) | 0.0 | 418/438(95%) | 0/438(0%) | Minus/Plus |
Query 2 LSTDGLALKAGIRSFVESESTVDPALSSLTIQKQLGENAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVEVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLVEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMT 1315 LSTDGLALKAGIRSFVESE V+P LS+ I KQL ENAYAENEMIALFCIRHHVRLI+ITPEYEVSWKFGE EWPLCGILCLKS+HFQPCAPLNGCMITAIASALGRREV+VLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCD+NGEIEVINP G+ISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDS+PWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMD+ CKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRL+EGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMT Subject 3304 LSTDGLALKAGIRSFVESERLVNPDLSAPAISKQLEENAYAENEMIALFCIRHHVRLIVITPEYEVSWKFGEGEWPLCGILCLKSSHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPRGKISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSRPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEGCKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMT 4617
Range 2: 3447 to 4616 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
770.4 bits(1675) | 0.0 | 357/390(92%) | 0/390(0%) | Plus/Minus |
Query 3 VMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSTSLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHXXXXXXXXXXEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSARSKLGKYVIFDPFKESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQMXXXXXXXXXYIMFRPPP*HSSSKM*LVLGLHK*LRTSTSRLPSADAIAVIMQPLRGAQGWK*LDFKHRIPHRGHSLSPNFQLTSYSGVIMISLT*CLMQN 1172 VMEPFLKLQG+LESNIGFTNLRLSKLYLYDFPS+SLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLH SSISRSLLIEFA+ARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQG ESLNFSSLITPV+PPSKHP*SFSARSKLGKYVIFDPFKESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCS VMSN A++ P GLITSISP SHLAQMSKASKASAKYIM RPPP* SSSK+*LVLGLH+* TSTSRLPSA+A+AVIMQP GA GWK*LD + RIPHRGHS SPNFQLTSYSGVI ISLT C +QN Subject 3447 VMEPFLKLQGSLESNIGFTNLRLSKLYLYDFPSSSLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHPSSISRSLLIEFAKARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGLESLNFSSLITPVRPPSKHP*SFSARSKLGKYVIFDPFKESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSLVMSNNAEILPRGLITSISPFISHLAQMSKASKASAKYIMLRPPP*QSSSKI*LVLGLHR*FNTSTSRLPSAEAMAVIMQPFNGAHGWK*LDLRQRIPHRGHSPSPNFQLTSYSGVITISLTWCRIQN 4616
Range 3: 3306 to 3383 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.5 bits(82) | 0.0 | 18/26(69%) | 0/26(0%) | Plus/Minus |
Query 1236 ERAGSTVDSLSTNDLIPAFKARPSVL 1313 ER+G T SLST D IPAF+A PSVL Subject 3306 ERSGFTKRSLSTKDRIPAFRASPSVL 3383
Range 4: 3304 to 4617 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
722.3 bits(1570) | 0.0 | 324/438(74%) | 0/438(0%) | Plus/Minus |
Query 2 SHGAFFEVTG*S*IKHWIYEPPTLQVVPI*LSFDQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*INVTRGE*LNFIKDHAMTSL*ACNFSKKDFKGNDIPTLLL*FACLHHLTLIIHFQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCAKHDCQFSLFDVRSRHSSKPRF*IIKFLITYHAS*TSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPVTNLFDMPNVFIRYVKQSRYAPAWINNLNFTIDITFGTDVESFKSFC*IHHVQTPPLT*FFKNVIGAGST*VIKNLYLTPSKC*CNSCDHAAIKRGTRLEMIGL*TQNST*GPLTFPKLPAHLIFWCYNDQPHMMPNAE*SNHFILCVSIFXXXXXXXXXXXXWVNC*LTFHKRPYSCLQS*TICAK 1315 SHGAFFEVTG*S*IKH IYEPP LQVVPI*L F+QPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*I+VTRGE*LNFIKDHAMTSL*ACNF KK+FKG++IP LLL*FACLHHLT +IH QVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKC K++CQFSLF+V S HSSKPR *IIKFL+ YH S*TSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIH YTLRP+TNLFDMP V I YVKQ R IN+ N +I ITF +V+ KSF *IHHV+TP LT KN+I AGST +I ++ TPSKC* N CDHA I+ GT LE+ +NS GP TFPK P IFWC QPHM+PN +* NH IL +SI +L *K W+ LT HKR + LQ +I A+ Subject 3304 SHGAFFEVTG*S*IKHRIYEPPALQVVPI*LPFEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*IDVTRGE*LNFIKDHAMTSL*ACNFPKKNFKGDNIPALLL*FACLHHLTPLIHLQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCTKYNCQFSLFNVGS*HSSKPRP*IIKFLVAYHTS*TSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHFYTLRPITNLFDMPYVLISYVKQCRNFTTRINHFNLSIYITFSANVKGLKSFS*IHHVKTPSLTKLLKNMISAGSTQII*HINFTPSKC*SNGCDHATIQWGTWLEVT*FKAKNSAQGPFTFPKFPTDFIFWCDYYQPHMVPNTK*CNHLILGISILFQLFRNGWG*KIWIYQALTLHKRSNTGLQGKSISAE 4617
Range 5: 3309 to 4616 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
697.1 bits(1515) | 0.0 | 323/436(74%) | 0/436(0%) | Minus/Plus |
Query 3 HRWSSFEGRNKVVCGK*VNS*PSSFKPNYTEATWRKCLRRE*NDCFILH*ASCEADHYNTRI*GELEVWGK*VAPMWNSVFKVQSFPTLCPS*WLHDHSYCISTWKA*GRGS*LLM*TQHQSHF*RTMSRGGSEHDVFSRSF*SFRHLCQM*CQW*N*GY*SRRAHICSV*HNE*TH*ACRKDW*RASKYKGG*AAKS*TISS*PAFFERVKDNIFSKF*AGGKTSGVLAGRFNWRDK**EI**FKTLACWSVYF*HQTKRIDSRAWHIWGWKEFPIQELHEEI*RKICNICLT*AGSSKFNQKGPGNG**V*GGEGRQIKEGGLGCRYL*SLS*KSYRPKGWSLRDL**SSAIPPWLH*SMSSCYSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEAGRRKVI*VQLGESEVRKSNV*FKITL*LQKRLHD 1310 H W+ EGR + CG+* SF P++ R+CL RE*+DC IL+ A CEAD +TRI* +LE+WG+*+AP+ NS+ ++S PT+CP WLHDHS+C STWKA* L +*TQH S+F* +S GS HDVFS SF* HL M* +W +* *S + C V*HN * H ACRKDW* ASKYK G*AAKS*TISS*PAFFERVKDNIFSKF*AGGKTSGVLAGR NW DK EI**FK LACWSV F H TKRIDS W+IWGWKEFPIQELHEEI*RKICNICLT*AG SKFNQKGPG+G* V*GGEGRQIKEGGLGC +L*S S*+SYRPKGWSLRDL**SSAIPPWLH SMSSCYSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEA RR+VI*VQLGE EVRKS+V*FK TL*LQKRLHD Subject 3309 H*WTCPEGRYSIFCGE*ALGKSRSFSPSHF*TIGRECLCRE*DDCIILYSAPCEADSNHTRI*SQLEIWGR*MAPVRNSLP*IKSLPTMCPIEWLHDHSHCFSTWKA*S*CVKLSV*TQH*SYF*GALSGRGS*HDVFS*SF*GL*HLR*M*YKWRD*SD*SAW*NFCIV*HN**AHKACRKDW*WASKYKSG*AAKS*TISS*PAFFERVKDNIFSKF*AGGKTSGVLAGRSNWCDKRREI**FKALACWSVNFRH*TKRIDSCTWYIWGWKEFPIQELHEEI*RKICNICLT*AGFSKFNQKGPGDG*GV*GGEGRQIKEGGLGCCHL*SFS*ESYRPKGWSLRDL**SSAIPPWLHRSMSSCYSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEAARREVI*VQLGEPEVRKSDV*FKTTL*LQKRLHD 4616
Range 6: 3305 to 4618 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
682.9 bits(1484) | 0.0 | 322/438(74%) | 0/438(0%) | Plus/Minus |
Query 1 QSWSLF*SYRVILNQTLDLRTSDSPSCTYMTFLRPASICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDQCNQGGIAELHQRSRNDQPLGL*LF*ERLQR*RHPNPPSLICLPSPPYTHHPFPGPF*LNLLEPA*VRQMLQIFLQIXXXXXCIGNSFQPQMCQARLSILFV*CQK*TLQQAKVLNH*ISHHLSRQLNLPASTPEVFPPAQNLENMLSLTRSKKAGQELIV*LFAAHPPLYFEARYQSFRHA*CVHSLCQTEQICARLD**PQFXXXXXIWHRCRKLQKLLLNTSCSDPPLDIVLQKCDWCWVYISN*EPLPHAFQVLMQ*L*SCSH*EGHKVGNDWTLNTEFHIGATHFPQTSSSPHILVL**SASHDA*CRIKQSFHSLRKHFLQVASV*LGLKELGQLLTHFPQTTLFLPSKLDHLC* 1314 QSWSLF*SYRV+LNQT DLRTS SPSCTYMT LR ASICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDID+CNQGGIAELHQRSRNDQPLGL*L *E+LQR*+HP+PPSLICLPSPPYT HP PGPF*LNLL+PA*VRQMLQIFLQISS*SSCIGNSFQPQM Q +LSILFV*C+K TLQQAK LNH*IS LS QL+LPASTPEVFPPAQNLENMLSLTRSKKAGQELIV*LFAAHP LYFEA YQSFRHA C H LCQT Q D* Q H +HI +C++ QKL LNTSC DP D QK D CWVY N HAFQVL Q L*SC+H GH VG+D EF GA H PQ S+ HILV SASH A +I QS HS KH L + LGLK+L H PQ + PS H C* Subject 3305 QSWSLF*SYRVVLNQTSDLRTSGSPSCTYMTSLRAASICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQGGIAELHQRSRNDQPLGL*LS*EKLQR*QHPSPPSLICLPSPPYTPHPSPGPF*LNLLKPA*VRQMLQIFLQISS*SSCIGNSFQPQMYQVQLSILFV*CRKLTLQQAKALNH*ISRRLSHQLDLPASTPEVFPPAQNLENMLSLTRSKKAGQELIV*LFAAHPLLYFEAHYQSFRHALCAH*LCQTMQKFYHAD*SLQSLHLYHI*RKCQRPQKLQLNTSC*DPLPDKAPQKYD*CWVYTDNLTHQLHAFQVLKQWL*SCNHSMGHMVGSDLI*GKEFRTGAIHLPQISN*LHILV*LLSASHGAEYKIMQSSHSRHKHSLPIV*KWLGLKDLDLPSAHSPQKIEYRPSGQVHQC* 4618
Range 7: 3347 to 4171 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
359.8 bits(779) | 0.0 | 180/275(65%) | 0/275(0%) | Minus/Plus |
Query 448 LWKVSQQLTQLFQA*LYRSNLEKMLTQRMK*LLYSALGIM*G*SL*HQNMR*AGSLGKVSGPYVEFCV*SPIISNLVPLLMAA*SQLLHQHLEGVR*RFLITYVDPAPITFLKNYVKGGV*T*CI*QKLLKLSTSVPNVMSMVKLRLLIQAGAYLLCLT*RMNTLGMSKRLVTGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLSGRKNFRGACWEV*LA**VMRNLMIQNLGLLECLLLTSNKEN*QSCLAHLGLERVSYTRAS*RDLKEN 1272 LW+VS Q+FQ + +N ++ML RM+*L Y G M*G* HQNM+ G+LGKV+GP EF + + SN VP M A*SQ L QHLEGV+ I VDPA I FL+++V+ GV T*CI* KLL+ T NV+ M +L+ LI+ +L CLT* M+T GMSKRLV GLKV*+WMSCEKLNDQLLTCFL*TGQR*HIFQVLSGRKNFRGACWEV*L ** RNLMIQ LGLLEC L T NKEN*Q L HLGLERVSYTRAS*RDLKEN Subject 3347 LWRVSAW*IQIFQPQPFLNNWKRMLMPRMR*LHYFVFGTM*G***SHQNMKSVGNLGKVNGPCAEFFALNQVTSNHVPH*MVA*SQPLLQHLEGVKLMC*IICVDPALIIFLRSFVREGVLT*CI*LKLLRPLTFALNVI*MERLK*LIRVVKFLHCLT*LMST*GMSKRLVMGLKV*KWMSCEKLNDQLLTCFL*TGQR*HIFQVLSGRKNFRGACWEV*LV**ATRNLMIQGLGLLECQLPTLNKEN*QLYLVHLGLERVSYTRAS*RDLKEN 4171
Range 8: 4448 to 4618 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
125.7 bits(268) | 0.0 | 53/57(93%) | 0/57(0%) | Minus/Plus |
Query 1 KAHMILKKIELFWVLNRVTY*GWSKESHIGTTWRVGGS*IQCLIQDYPVTSKKAP*L 171 KAHMILKKIELFWVLNRVTY*G SK SHIGTTWR GGS*I+CLIQDYPVTSKKAP*L Subject 4448 KAHMILKKIELFWVLNRVTY*GCSKGSHIGTTWRAGGS*IRCLIQDYPVTSKKAP*L 4618
Range 9: 4205 to 4393 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
122.5 bits(261) | 0.0 | 54/63(86%) | 0/63(0%) | Minus/Plus |
Query 226 QIQSKGTWKWMMSVRW*RQANQRRRVGMSLPLKSFLEKLQA*RLVIA*SLMKFSYSPLVTLIY 414 QIQSKGTW+WM VRW*RQANQRRR GM PLK FL KLQA*RLVIA*SLMKFSYSPLVT IY Subject 4205 QIQSKGTWRWMRGVRW*RQANQRRRAGMLSPLKFFLGKLQA*RLVIA*SLMKFSYSPLVTSIY 4393
Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome
Sequence ID: KR054734.1 Length: 8753 Number of Matches: 9
Range 1: 3322 to 4635 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1000.0 bits(2176) | 0.0 | 410/438(94%) | 0/438(0%) | Minus/Plus |
Query 2 LSTDGLALKAGIRSFVESESTVDPALSSLTIQKQLGENAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVEVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLVEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMT 1315 LSTDGLALKAGIRSFVESES VDP+LS+ T+ +QL +NAYAENEMIALFCIRHHVRLIIITPEYEVSWKFG+SEWPLCGILCL+SNHFQPCAPLNGCMITAIASALGRREV+VLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCD+NGEIEVINPGGR+SALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLS+NGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWL+G+STSDIK RELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDD CKV KAGKSKKEGWDVVTFEVFLRK+ LKAGHCVIFDEVQLFPPGYIDLCLL IRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRL+EGKSYRYN+ESRRFVNPMF+SRLPC+FKKGSMT Subject 3322 LSTDGLALKAGIRSFVESESLVDPSLSAQTVLRQLSDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPGGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSDIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKIANLKAGHCVIFDEVQLFPPGYIDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMT 4635
Range 2: 3462 to 4634 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
681.5 bits(1481) | 0.0 | 323/391(83%) | 0/391(0%) | Plus/Minus |
Query 3 VMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSTSLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHXXXXXXXXXXEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSARSKLGKYVIFDPFKESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQMXXXXXXXXXYIMFRPPP*HSSSKM*LVLGLHK*LRTSTSRLPSADAIAVIMQPLRGAQGWK*LDFKHRIPHRGHSLSPNFQLTSYSGVIMISLT*CLMQNK 1175 VMEPFLK G+L+SNIGFTNLRLS LYL D PS++LN+SLCSAP IA SF ESYVL*QGSPAREMKASLR+ R RS+*PGGNS*TSSK+TQ PAFR FLR TSKVTTSQPSFFDLPAF TL SSIS+SLLIEFARA LGET VTN PSDLF+KLLYRKL PAP VPSTTVNS L+SEVD P S G ESLNFSSLITPVKPPSKHP SFSA SKLGK VIFDPF E RSRADR TF SSSTF+L GPLPIFSTCL+CS VMSNRADMRPPGL+TSISPL SHLAQMS ASKASA+YIMF+PPP*HSSS M* V GLH+*LRTSTSRLPSA+AIAVIMQP GAQG K* D KH+IPHRGHSLSPNFQLTSYSGVIMISLT*CLMQNK Subject 3462 VMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVL*QGSPAREMKASLRMVNRQRSI*PGGNS*TSSKMTQWPAFRFAIFLRNTSKVTTSQPSFFDLPAFATLQLSSISKSLLIEFARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLISEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTFLSSSTFMLCGPLPIFSTCLICSLVMSNRADMRPPGLMTSISPLISHLAQMSNASKASARYIMFKPPP*HSSSNM*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHRGHSLSPNFQLTSYSGVIMISLT*CLMQNK 4634
Range 3: 3324 to 3401 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.5 bits(82) | 0.0 | 17/26(65%) | 0/26(0%) | Plus/Minus |
Query 1236 ERAGSTVDSLSTNDLIPAFKARPSVL 1313 ++ GST DSLST + +PAFKA PSVL Subject 3324 DKDGSTRDSLSTKERMPAFKASPSVL 3401
Range 4: 3322 to 4635 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
509.7 bits(1106) | 0.0 | 235/438(54%) | 0/438(0%) | Plus/Minus |
Query 2 SHGAFFEVTG*S*IKHWIYEPPTLQVVPI*LSFDQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*INVTRGE*LNFIKDHAMTSL*ACNFSKKDFKGNDIPTLLL*FACLHHLTLIIHFQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCAKHDCQFSLFDVRSRHSSKPRF*IIKFLITYHAS*TSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPVTNLFDMPNVFIRYVKQSRYAPAWINNLNFTIDITFGTDVESFKSFC*IHHVQTPPLT*FFKNVIGAGST*VIKNLYLTPSKC*CNSCDHAAIKRGTRLEMIGL*TQNST*GPLTFPKLPAHLIFWCYNDQPHMMPNAE*SNHFILCVSIFXXXXXXXXXXXXWVNC*LTFHKRPYSCLQS*TICAK 1315 SHGA E+T S +KHWI++PPTL VVP+ L+ QY+TL S+Q +I L +ICALT ITSKR+ES+T+ +T +N+ E LN IK+ AM L CNF KK FKG+++PT *FA L H IIHFQV F+*IC*SP *+K Y+F+FR LH+ALV + +S K AKHDCQ S FD+RS +S +P I+K LITYH S* Q PL+ F P KTWK+ YL* + K+VKS SF+FSQLIHLY LR V NL +M N+ + YVK S +APA +++LN IDIT +V+ F+SF IHHVQT LT FK VI G V+KN++ T ++ +SCDHAAI GTRL+MI L +ST PL KLP HLIFW NDQPHMMPNA+* HF+LC+SI ++L *+ W+ TF++R Y+C QS IC + Subject 3322 SHGALLEMTWQSGLKHWIHKPPTLNVVPVGLTLK*SQYITLLSSQYCAILLGVICALTGITSKRNESITSYG*QTKVNIAWREQLNLIKNDAMACLQVCNFPKKHFKGHNVPTFFF*FASLCHFATIIHFQVSFN*IC*SPSG*NKGYEFAFRPLHKALVQKAFTSSKGAKHDCQLSRFDIRS*YS*EPWLGIVKLLITYHTS*AP*QTPLQLFSPFKTWKVSYL*SIH*KEVKSRSFHFSQLIHLYALRAVANLLNMSNMLVGYVK*S*HAPARVDDLNLPIDITLSANVKCFESFSEIHHVQTTTLTQLFKYVICGGPAQVVKNIHFTSTERRGDSCDHAAI*WGTRLKMI*LQA*DSTQRPLAISKLPTHLIFWGNNDQPHMMPNAK*GYHFVLCISIITELPQNGLG*QRWIYKRFTFNERTYACFQSKPICTQ 4635
Range 5: 3327 to 4634 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
424.5 bits(920) | 0.0 | 223/436(51%) | 0/436(0%) | Minus/Plus |
Query 3 HRWSSFEGRNKVVCGK*VNS*PSSFKPNYTEATWRKCLRRE*NDCFILH*ASCEADHYNTRI*GELEVWGK*VAPMWNSVFKVQSFPTLCPS*WLHDHSYCISTWKA*GRGS*LLM*TQHQSHF*RTMSRGGSEHDVFSRSF*SFRHLCQM*CQW*N*GY*SRRAHICSV*HNE*TH*ACRKDW*RASKYKGG*AAKS*TISS*PAFFERVKDNIFSKF*AGGKTSGVLAGRFNWRDK**EI**FKTLACWSVYF*HQTKRIDSRAWHIWGWKEFPIQELHEEI*RKICNICLT*AGSSKFNQKGPGNG**V*GGEGRQIKEGGLGCRYL*SLS*KSYRPKGWSLRDL**SSAIPPWLH*SMSSCYSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEAGRRKVI*VQLGESEVRKSNV*FKITL*LQKRLHD 1310 +RW+ FE R+ K*++ PN EA CL RE ND ILH*ASCEADHY RI*GELEVW VA +WN + V+SF TLCP WLHDHSY + * S*L + H+SH *R +SR EHDV SF S HL +* QW +*G+ RAH+ S+*HN+ +* C +DW R +++KGG*A KS TI S*P F E +KDN+ SKF* G K +GV A NW DK**E+* F+ +A ++ F*+Q R+DSRAWH+W W + +QEL+EE+*R+I N+C T GSSKFN K GNG**+ G+G QIK+ LG L*S+S*++ +P+G LR ** S +P L+* +S +++* FH SCW*SLSKHI* K G * E*+IE V+ VQ ESEV +SNV* + + Q+ LHD Subject 3327 YRWACFESRHTFFR*K*ISCRSIFVSPNRFEAAQ**CLCRERNDSLILH*ASCEADHYYPRI*GELEVWR*RVASVWNLMLAVKSFSTLCPIKWLHDHSYRLCAR*T*SGCS*LPVQALHKSHI*RAVSRWWFEHDVSR*SFRSI*HLR*V*YQWGD*GHQPWRAHVSSI*HNQRAY*TC*EDWQRPAEHKGG*AEKSETICS*PPFNEWIKDNLLSKF*KG*KAAGVFARGLNWCDK**EV*RFQAMALRNINF*YQISRVDSRAWHLWSW*KLSVQELYEEV*RQIRNLCFTQKGSSKFN*KRLGNG**LQSGKGWQIKKRRLGRCDL*SVS*ENCKPEGRPLRHF**GSTVPSRLY*PLSVNHTK*CFHFSCW*SLSKHI*LPKGSRNTGS*AE*YIEIT*G*VLQVQH*ESEVCESNV*VQTAMSFQEGLHD 4634
Range 6: 3329 to 4636 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
397.9 bits(862) | 0.0 | 221/436(51%) | 0/436(0%) | Plus/Minus |
Query 1 QSWSLF*SYRVILNQTLDLRTSDSPSCTYMTFLRPASICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDQCNQGGIAELHQRSRNDQPLGL*LF*ERLQR*RHPNPPSLICLPSPPYTHHPFPGPF*LNLLEPA*VRQMLQIFLQIXXXXXCIGNSFQPQMCQARLSILFV*CQK*TLQQAKVLNH*ISHHLSRQLNLPASTPEVFPPAQNLENMLSLTRSKKAGQELIV*LFAAHPPLYFEARYQSFRHA*CVHSLCQTEQICARLD**PQFXXXXXIWHRCRKLQKLLLNTSCSDPPLDIVLQKCDWCWVYISN*EPLPHAFQVLMQ*L*SCSH*EGHKVGNDWTLNTEFHIGATHFPQTSSSPHILVL**SASHDA*CRIKQSFHSLRKHFLQVASV*LGLKELGQLLTHFPQTTLFLPSKLDHL 1308 QSWS *+ + QTLD +TSDS CT T+ + SI HS Q P F +HMCFD+DHQQE+*K H D Q + G E HQ+ RN P GL *E LQR + PN LIC P P +HPFP F*LNLLEP V+Q L+I LQ SS*SSC + +Q Q CQARLS L +* QK +A N * SHHLS QL+ A+TP F P QNLE+ LSL S K GQE IV LF+AHPPL R QS +H * LCQ E CAR **PQ H*+H +C+ L+KL +TSCS+ LD LQ CD +*E H ++ +*L*SCSH GHKV ND T + FH AT + QTS+SPHIL **SASHDA*C+I+ SF SL KH+ AS GL ++ HF + + L SK HL Subject 3329 QSWSPS*NDMAVWTQTLDSQTSDSQCCTCRTYPQVISIYHSAQLPVLRDPFGSHMCFDRDHQQEK*KHHFVWLTDKGQYSLEGTVEPHQK*RNGLPSGLQFS*ETLQRSQRPNLLFLICQPLPLCNYHPFPSLF*LNLLEPFWVKQRLRICLQTSS*SSCTESFYQLQRCQARLSTLEI*YQKLIFLRAMAWNR*TSHHLSHQLSPLANTPAAFQPFQNLESKLSLIHSLKGGQEQIVSLFSAHPPLCSAGRCQSSQHV*YARWLCQIELTCARQG**PQSPH*YHT*RKCQMLRKLQRDTSCSNHHLDTALQICDLWRACTGS*EHPLHVYRAQRR*L*SCSHLMGHKVENDLTASIRFHTEATRYLQTSNSPHILG***SASHDA*CKIRLSFRSLHKHYH*AASKRFGLTKMDLQEIHFQRKNVCLLSKQAHL 4636
Range 7: 3434 to 4189 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
214.1 bits(461) | 0.0 | 139/252(55%) | 0/252(0%) | Minus/Plus |
Query 448 MLTQRMK*LLYSALGIM*G*SL*HQNMR*AGSLGKVSGPYVEFCV*SPIISNLVPLLMAA*SQLLHQHLEGVR*RFLITYVDPAPITFLKNYVKGGV*T*CI*QKLLKLSTSVPNVMSMVKLRLLIQAGAYLLCLT*RMNTLGMSKRLVTGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLSGRKNFRGACWEV*LA**VMRNLMIQNLGLLECLLLTSNKEN*QSCLAHLGLERVSYTRAS*RDLKEN 1203 ML QR K* Y ALGIM*G*SL QNMR* GSL SG VE S II NLVP MAA*SQL V+ FL T P IT+LK+ VK V*T*CI KL K T +V+SM +LR AGA L LT* + L M +RL T + *RWMS EK ND LLT F * QR* FQVL G K+ RG C *L **VMR+L I + G E LL SN E+*QSCLA L L + TRA *R LK N Subject 3434 MLMQRTK**PYFALGIM*G*SLLPQNMR*VGSLEIASGLCVESYACSQIIFNLVPH*MAA*SQLSPLRSVDVKWMFLTTCAGPPQITYLKSCVKVVV*T*CISLKLSKHLTFALSVISMGRLRSSTLAGACQLYLT*PTSILDMLRRLATARRA*RWMS*EK*NDLLLTSFQ*MDQR*LTFQVLKGLKSCRGVC*GA*LV**VMRSLTIPSHGSQEYQLLISNLES*QSCLAPLELVKAFCTRAL*RGLKAN 4189
Range 8: 4223 to 4390 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
71.6 bits(150) | 0.0 | 32/56(57%) | 0/56(0%) | Minus/Plus |
Query 247 QIQSKGTWKWMMSVRW*RQANQRRRVGMSLPLKSFLEKLQA*RLVIA*SLMKFSYS 414 QIQ K TWKWM+ +W R ANQ+++VG PLK FL KLQ *R IA LM+F+ S Subject 4223 QIQLKETWKWMIVAKWQRLANQKKKVGTL*PLKCFLGKLQT*RQAIASFLMRFNCS 4390
Range 9: 4466 to 4636 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
67.5 bits(141) | 0.0 | 32/57(56%) | 0/57(0%) | Minus/Plus |
Query 1 KAHMILKKIELFWVLNRVTY*GWSKESHIGTTWRVGGS*IQCLIQDYPVTSKKAP*L 171 KAHM K+I +W L+RV Y* + + S GTT RVGG *IQCL D V S++AP*L Subject 4466 KAHMTPKRIAQYWELSRVIY*DYLRVSPTGTTLRVGGL*IQCLSPDCHVISRRAP*L 4636
Grapevine rupestris stem pitting associated virus isolate SK704 A, complete genome
Sequence ID: KX274274.1 Length: 8725 Number of Matches: 11
Range 1: 3322 to 4635 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
994.0 bits(2163) | 0.0 | 407/438(93%) | 0/438(0%) | Minus/Plus |
Query 2 LSTDGLALKAGIRSFVESESTVDPALSSLTIQKQLGENAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGESEWPLCGILCLKSNHFQPCAPLNGCMITAIASALGRREVEVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDVNGEIEVINPGGRISALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLVEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMT 1315 LSTDGLALKAGIRSFVESES DPALS+ T+ KQLG+NAYAENEMIALFCIRHHVRLIIITPEYEVSWKFG+SEWPLCGILCL+SNHFQPCAPLNGCMITAIASALGRREV+VLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCD+NGEIEVINP GR+SALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLS+NGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWL+G+STS+IK RELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK+DLEMDD CKV KAGKSK+EGWDVVTFEVFLRK+ LKAGHCVIFDEVQLFPPGY+DLCLL IRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRL+EGKSYRYN+ESRRFVNPMF+SRLPC+FKKGSMT Subject 3322 LSTDGLALKAGIRSFVESESIADPALSTQTVLKQLGDNAYAENEMIALFCIRHHVRLIIITPEYEVSWKFGDSEWPLCGILCLQSNHFQPCAPLNGCMITAIASALGRREVDVLNYLCRPSTNHIFEELCQGGGLNMMYLAEAFEAFDICAKCDINGEIEVINPSGRMSALFDITNEHIRHVEKIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSNIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDDGCKVAKAGKSKREGWDVVTFEVFLRKIENLKAGHCVIFDEVQLFPPGYVDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMT 4635
Range 2: 3462 to 4634 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
658.1 bits(1430) | 0.0 | 316/391(81%) | 0/391(0%) | Plus/Minus |
Query 3 VMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSTSLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHXXXXXXXXXXEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSARSKLGKYVIFDPFKESRSRADRLTFRSSSTFIL*GPLPIFSTCLMCSFVMSNRADMRPPGLITSISPLTSHLAQMXXXXXXXXXYIMFRPPP*HSSSKM*LVLGLHK*LRTSTSRLPSADAIAVIMQPLRGAQGWK*LDFKHRIPHRGHSLSPNFQLTSYSGVIMISLT*CLMQNK 1175 VMEPFLK G+L+SNIGFTNLRLS LYL D PS++LNMSLCSAP IA SF ESYVL*QGSPA EMKASLR+ R RS *PGG S TSSKITQ PAFR FLR TSKVTTSQPS FDLPAF TL SSISRS LIE ARA LGET VTN PSDLF+KLLYRKL PAP VPSTTVNS L+ EVD P S G ESLNFSSLITPVKPPSKHP SFSA SKLGK VIFDPF E RSRADR TF SSSTF+L GPLPIFSTCL+CS VMSN+ADMRP GLITSISPL SHLAQMS ASKASA+YIMFRPPP H+SSK+* V GLH+*LRTSTSRLPSA+AIAVIMQP GAQG K* D KH+IPH+GHSLSPNFQLTSYSGVIMISLT*CLMQNK Subject 3462 VMEPFLK*HGSLDSNIGFTNLRLSILYL*DLPSSNLNMSLCSAPSIARSFWESYVL*QGSPASEMKASLRMVNRQRST*PGGKSWTSSKITQWPAFRFSIFLRNTSKVTTSQPSLFDLPAFATLQPSSISRSFLIELARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLIFEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTFLSSSTFMLCGPLPIFSTCLICSLVMSNKADMRPLGLITSISPLISHLAQMSNASKASARYIMFRPPPWHNSSKI*FVEGLHR*LRTSTSRLPSAEAIAVIMQPFNGAQG*K*FDCKHKIPHKGHSLSPNFQLTSYSGVIMISLT*CLMQNK 4634
Range 3: 3324 to 3410 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
47.8 bits(98) | 0.0 | 20/29(69%) | 0/29(0%) | Plus/Minus |
Query 1227 VRLERAGSTVDSLSTNDLIPAFKARPSVL 1313 V ++RAGS +DSLSTN+ +PAFKA PSVL Subject 3324 VWVDRAGSAMDSLSTNERMPAFKASPSVL 3410
Range 4: 3433 to 4635 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
449.2 bits(974) | 0.0 | 210/401(52%) | 0/401(0%) | Plus/Minus |
Query 2 SHGAFFEVTG*S*IKHWIYEPPTLQVVPI*LSFDQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*INVTRGE*LNFIKDHAMTSL*ACNFSKKDFKGNDIPTLLL*FACLHHLTLIIHFQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCAKHDCQFSLFDVRSRHSSKPRF*IIKFLITYHAS*TSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPVTNLFDMPNVFIRYVKQSRYAPAWINNLNFTIDITFGTDVESFKSFC*IHHVQTPPLT*FFKNVIGAGST*VIKNLYLTPSKC*CNSCDHAAIKRGTRLEMIGL*TQNST*GPLTFPKLPAHLIFWCYNDQPHMMPNAE*SNHFILCVSI 1204 SHGA ++T S +KHWI++PP L +VP+ L+ QYVTL S ++ L +ICALT +TSK +ESVT+ T +NV R + L+ IK+H M L* N S+K FKG+++PT L*FACL H IIHFQV F+*I *SPP *+K Y+ +FR LH+A V + + K +KHDCQF FD+ S + +P IIKFLITY+ S* S Q L+ F PLK WK+ YL + K+VKS SF+FSQ IHLY LR + NL ++ +FI YVK S +A A INNLNF+I+IT GT+VE F+ +HHVQ L FFK++I S ++K+++LT ++ NS HAAI+ GT L+MI L QNST* PLT K P HLI W NDQPHMMPNAE* H +LC+SI Subject 3433 SHGALLKMTWQSGLKHWIHKPPALNIVPVGLALK*SQYVTLLSP*YRAVLLGVICALTGVTSK*NESVTSYG**TKVNVARRKKLDLIKNHTMACL*IFNLSEKYFKGHNVPTFSL*FACLCHFATIIHFQVLFN*IS*SPPG*NKGYELTFRPLHKAFVQKAFACSKSSKHDCQFPRFDI*S*YP*EPWLGIIKFLITYNTS*AS*QTSLQLFSPLKAWKVSYLRSIH*KEVKSRSFHFSQFIHLYALRAIANLLNVSYMFIGYVK*S*HASARINNLNFSINITLGTNVECFEGLSEVHHVQATTLAQFFKDMICGRSAQIVKDIHLTSAERRGNSGYHAAIQWGTGLKMI*LQAQNST*RPLTISKFPTHLILWGDNDQPHMMPNAE*GYHLVLCISI 4635
Range 5: 3327 to 4487 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
402.9 bits(873) | 0.0 | 199/387(51%) | 0/387(0%) | Minus/Plus |
Query 150 HRWSSFEGRNKVVCGK*VNS*PSSFKPNYTEATWRKCLRRE*NDCFILH*ASCEADHYNTRI*GELEVWGK*VAPMWNSVFKVQSFPTLCPS*WLHDHSYCISTWKA*GRGS*LLM*TQHQSHF*RTMSRGGSEHDVFSRSF*SFRHLCQM*CQW*N*GY*SRRAHICSV*HNE*TH*ACRKDW*RASKYKGG*AAKS*TISS*PAFFERVKDNIFSKF*AGGKTSGVLAGRFNWRDK**EI**FKTLACWSVYF*HQTKRIDSRAWHIWGWKEFPIQELHEEI*RKICNICLT*AGSSKFNQKGPGNG**V*GGEGRQIKEGGLGCRYL*SLS*KSYRPKGWSLRDL**SSAIPPWLH*SMSSCYSQ*RFHLSCW*SLSKHI*FSK 1310 HR + FE + +C K*++ SS PN EATWR+CL RE +D ILH*ASCEADHY+ R+*GELE+W *VA MWN V ++SF TLCP WLHD+ YC+ + *G *L + T H+S+ *R + R EHDV S RHLCQ+* W N*GY*S R H+ +*HN+*T+ +DW +++KGG* KS TI S*P F E ++DN+ SK * G K +G+ A R NW K**EI**F+ +A + F +Q IDSRAW+ W ++ +Q+L+EE+*R + N+C T GSS FN KGPGNG* + G+GRQIKE LG L*S+S K + KG L D ** A WL * +S +++*RFH +CW* LSKHI* K Subject 3327 HRRACFESWHTFIC*K*IHCRSSSVNPNSFEATWRQCLCRERDDSLILH*ASCEADHYHPRV*GELEIWR**VAFMWNFVLAIKSFSTLCPIEWLHDNRYCLCARQT*GGCP*LSVQTFHKSYL*RIVPRWWPEHDVPR*GLRSIRHLCQV*Y*WRN*GY*S*RTHVSFI*HNQ*TYKTR*EDWQWPAEHKGG*TEKSETICS*PPFNEWIEDNLLSKL*EG*KAAGMFARRLNWCYK**EI**FQAMALRDINFKYQISGIDSRAWNFWSRQKLSVQKLYEEV*R*VRNLCFTQEGSS*FN*KGPGNG*WLQSGKGRQIKERRLGRCDL*SISQKD*KSKGRPLCDF**GPAFSSWLR*PLSINHTK*RFHFTCW*PLSKHI*LPK 4487
Range 6: 4466 to 4636 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.4 bits(108) | 0.0 | 27/57(47%) | 0/57(0%) | Minus/Plus |
Query 1 KAHMILKKIELFWVLNRVTY*GWSKESHIGTTWRVGGS*IQCLIQDYPVTSKKAP*L 171 KAHM K+ + L++VTY* + + S GT R GG *IQCL D V ++AP*L Subject 4466 KAHMTPKRTARY*GLSKVTY*DYLRASPTGTILRAGGL*IQCLSPDCHVILRRAP*L 4636
Range 7: 3326 to 4486 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
352.1 bits(762) | 0.0 | 196/387(51%) | 0/387(0%) | Plus/Minus |
Query 151 FENHMCFDKDHQQER*KRHCE*QEDIDQCNQGGIAELHQRSRNDQPLGL*LF*ERLQR*RHPNPPSLICLPSPPYTHHPFPGPF*LNLLEPA*VRQMLQIFLQIXXXXXCIGNSFQPQMCQARLSILFV*CQK*TLQQAKVLNH*ISHHLSRQLNLPASTPEVFPPAQNLENMLSLTRSKKAGQELIV*LFAAHPPLYFEARYQSFRHA*CVHSLCQTEQICARLD**PQFXXXXXIWHRCRKLQKLLLNTSCSDPPLDIVLQKCDWCWVYISN*EPLPHAFQVLMQ*L*SCSH*EGHKVGNDWTLNTEFHIGATHFPQTSSSPHILVL**SASHDA*CRIKQSFHSLRKHFLQVASV*LGLKELGQLLTHFPQTTLFLPSKLDHLC 1311 F +HMCFD+ HQQ +*KRH D Q +Q A HQ+S N PL F*E LQR + PN SLICLP P HHPFPGPF*LN LEP+ V+Q L+ +LQ SS*S C + Q QARLSI +* K +A NH*ISHHL QL+L A+ P F P+Q+LE+ LS S K GQE IV LF+ HPPL QS + VH LCQ + C R D**PQF H*+H WH+CR L++ TSCS L +LQ+ D V +* PH + Q* SCSH GH+V ND +T+FHI ATH+ Q S+SPH L **SASHDA*CRI+ S SL KH QVAS GL EL HF Q + SK LC Subject 3326 FGSHMCFDRGHQQVK*KRHFVWLIDKGQRSQEEKAGPHQKSHNGLPLDFQSF*EILQRSQRPNLLSLICLPLPLCNHHPFPGPF*LN*LEPSWVKQRLRTYLQTSS*SFCTESFCLLQKFQARLSIPEI*YLKLISLRAMAWNH*ISHHL*HQLSLLANIPAAFQPSQSLESKLSSIHSLKGGQEQIVSLFSVHPPLCSAGHCQSSQRVLYVHWLCQIKLTCVR*D**PQFLH*YHTWHKCRMLRRPQRGTSCSGHHLGTILQRYDLWKVCTDS*GHPPHVCRAQRQ*RLSCSHSMGHRVENDLIASTKFHIKATHYLQISNSPHTLG***SASHDA*CRIRLSSRSLHKHCRQVASKLFGLTELDLQWIHFQQMNVCQLSKQARLC 4486
Range 8: 4508 to 4636 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.9 bits(83) | 0.0 | 20/43(47%) | 0/43(0%) | Plus/Minus |
Query 1 QSWSLF*SYRVILNQTLDLRTSDSPSCTYMTFLRPASICHSVQ 129 QSWS *+ + QTLD +TS S CT T + SICH Q Subject 4508 QSWSPS*NDMAVWTQTLDSQTSGSQYCTCRTCPQVISICHFAQ 4636
Range 9: 3365 to 4183 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
199.5 bits(429) | 0.0 | 137/273(50%) | 0/273(0%) | Minus/Plus |
Query 454 LWKVSQQLTQLFQA*LYRSNLEKMLTQRMK*LLYSALGIM*G*SL*HQNMR*AGSLGKVSGPYVEFCV*SPIISNLVPLLMAA*SQLLHQHLEGVR*RFLITYVDPAPITFLKNYVKGGV*T*CI*QKLLKLSTSVPNVMSMVKLRLLIQAGAYLLCLT*RMNTLGMSKRLVTGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLSGRKNFRGACWEV*LA**VMRNLMIQNLGLLECLLLTSNKEN*QSCLAHLGLERVSYTRAS*RDLK 1272 L KV+ QL Q + SNL ML QR +* YSALGIM*G*SL Q+MR* G+L VSG YVEFC + II N VP MAA* LL VR L D I LKN K *T*C + K ST VP+V+ M KLRLLI A A L LT* MN +RL + *RWM+ EK ND LLT F * +R* FQ L G K+ R C E *L *VMRNLMI + G L SN N*QSCL L + T+A *R LK Subject 3365 LLKVNPLQIQLCQPKQF*SNLATMLMQRTR**PYSALGIM*G*SLSPQSMR*VGNLEIVSGLYVEFCACNQIIFNPVPH*MAA**PLLPLRSADVRWMSLTICADLPQIISLKNCAKVVA*T*CTSLRPSKHSTFVPSVILMEKLRLLILADACQLYLT*PMNI*DTLRRLAMARRA*RWMN*EK*NDLLLTSFQ*MDRR*LTFQALRGLKSCRDVC*EA*LVL*VMRNLMIPSHGSQGYQLQISNLGN*QSCLELLEQAKAFCTKAL*RGLK 4183
Range 10: 4226 to 4411 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
74.4 bits(156) | 0.0 | 34/62(55%) | 0/62(0%) | Minus/Plus |
Query 226 IQSKGTWKWMMSVRW*RQANQRRRVGMSLPLKSFLEKLQA*RLVIA*SLMKFSYSPLVTLIY 411 IQ K TWKWMM +W RQANQR +VG PLK F E+L+ *R I * LM+ S+ L TL + Subject 4226 IQLKRTWKWMMVAKWQRQANQREKVGTL*PLKYFSERLKI*RQAIV*FLMRSSFFLLATLTF 4411
Nucleotide Sequence (384 letters)
Query ID: | ds2016-133_14 |
Query definition: | No definition line |
Query length: | 603 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
190.2 | 913.2 | 26% | 1.015e-46 | 58% | KX274275.1 | |
207.9 | 988.7 | 28% | 4.899e-52 | 64% | AY368590.1 | |
77.8 | 77.8 | 21% | 7.195e-13 | 46% | KX925556.1 | |
77.3 | 77.3 | 21% | 9.853e-13 | 48% | AY881626.1 | |
84.6 | 134.7 | 19% | 6.451e-15 | 36% | KR054735.1 |
Alignments
Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome
Sequence ID: KX274275.1 Length: 8724 Number of Matches: 10
Range 1: 1801 to 2157 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
190.2 bits(413) | 0.0 | 86/119(72%) | 0/119(0%) | Plus/Plus |
Query 24 GFQWSLLKQRVNLKFLKGSETSFVELSSEVARLYKSVVLQALSPSASSGLAKVYVDHSSSQLCSDSHFTSDDELSNPALANDLTFEELLPGDFQGSQTAEQIACAHPTNDALRIDLAPP 380 G QW LLKQRVNLKFLK ETSFVELS VA+LYKSV+LQ LSP ASSGLAKVY+DHSS QLCSD HF SDDEL N ALAND+ L D QG QT EQ CAHP NDA I LAPP Subject 1801 GLQWFLLKQRVNLKFLKCGETSFVELSCGVAKLYKSVILQVLSPDASSGLAKVYIDHSSPQLCSDFHFMSDDELPNSALANDVISGSSLSEDRQGFQTVEQAECAHPANDAPCIVLAPP 2157
Range 2: 1793 to 2158 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
172.0 bits(369) | 0.0 | 83/122(68%) | 0/122(0%) | Plus/Plus |
Query 16 VCLVFSGLFLSRESI*NF*KVVKPPLLSSLVRWLGFTSLLCCKLCPQALHQAWLKYMLITLPRSFVLIPTSRQTMSCQILLWLMI*PLKNYYQETFKDLRLQSKSHVPIPQMMLFALIWLHR 381 + + FSG FLSRESI*NF* VVKP LLSS V TS L C+ C Q LHQA LKY+LITLPRSFVLI TS Q MSCQILL LM+* L ++YQ+T KD +L SK +VPIPQMML AL WLHR Subject 1793 IFVAFSGFFLSRESI*NF*NVVKPLLLSSPVGLQNSTSQLFCRFCLQMLHQA*LKYILITLPRSFVLIFTSCQMMSCQILL*LMM*YLDHHYQKTVKDSKL*SKLNVPIPQMMLLALFWLHR 2158
Range 3: 1780 to 2019 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
117.0 bits(249) | 0.0 | 55/80(69%) | 0/80(0%) | Minus/Minus |
Query 3 LIV*REVGIRTKLRGRVINIYFSQA**SAWGQSLQHNRLVKPSHLTRELNKGGFTTFQKFQIDSLLKKRPLKTKHTQHIA 242 LI+* EV IRTKLRGRVINIYFS A**S W Q+LQ+N LV+ + T ELNK GFTTFQKFQIDSLLKK+PLK + ++ Subject 1780 LII*HEVKIRTKLRGRVINIYFS*A**SIWRQNLQNN*LVEFCNPTGELNKRGFTTFQKFQIDSLLKKKPLKATKMEELS 2019
Range 4: 2001 to 2156 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
73.0 bits(153) | 0.0 | 30/52(58%) | 0/52(0%) | Minus/Minus |
Query 224 GGARSMRRASFVGWAHAICSAV*DP*KSPGNNSSKVRSLARAGFDNSSSDVK 379 GGA++M+ ASF GWAH+ CS V +P*+S N+ + SLARA F NSSSD+K Subject 2001 GGAKTMQGASFAGWAHSACSTVWNP*RSSDNDDPDITSLARAEFGNSSSDMK 2156
Range 5: 1805 to 2044 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
117.5 bits(250) | 0.0 | 57/80(71%) | 0/80(0%) | Minus/Minus |
Query 28 H*PEQDLTTHRLT*SGNQNKAARKSDQHIL*PGLMKRLGTKLATQQTCKA*PPH*RAQQRRFHYLSKISN*LSA*EETTE 267 H* EQ+L TH LT*S NQNKAA KSDQ+IL* LMK L TK A TC+ PH RAQQ+RFH++SKISN*LSA*EETTE Subject 1805 H*LEQNLATHHLT*SENQNKAAGKSDQYIL*LSLMKHLETKPAE*LTCRVLQPHRRAQQKRFHHISKISN*LSA*EETTE 2044
Range 6: 2074 to 2157 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
48.7 bits(100) | 0.0 | 21/28(75%) | 0/28(0%) | Minus/Minus |
Query 297 RWSQINAKSIICGMGTCDLLCSLRSLKV 380 RWSQ NA+SIICGMGT LL SL SL V Subject 2074 RWSQNNARSIICGMGTFSLLYSLESLTV 2157
Range 7: 1800 to 1868 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
46.9 bits(96) | 0.0 | 19/23(83%) | 0/23(0%) | Minus/Minus |
Query 23 KEVSLPFKNFKLTLCLRRDH*KP 91 KEVS FKNFKLTLCLRR+H*+P Subject 1800 KEVSPHFKNFKLTLCLRRNH*RP 1868
Range 8: 2099 to 2155 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
38.6 bits(78) | 0.0 | 13/19(68%) | 0/19(0%) | Minus/Minus |
Query 322 VEPDQCEEHHLWDGHMRFA 378 VEP QC+EHHL DGH++ A Subject 2099 VEPKQCKEHHLRDGHIQLA 2155
Range 9: 1917 to 1961 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
34.1 bits(68) | 0.0 | 12/15(80%) | 0/15(0%) | Minus/Minus |
Query 140 YTLARPDEALGDKAC 184 YTLA+PDEA GDK C Subject 1917 YTLAKPDEASGDKTC 1961
Range 10: 1797 to 2042 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
75.3 bits(158) | 0.0 | 56/82(68%) | 0/82(0%) | Plus/Plus |
Query 20 VWFSVVSS*AESQFEIFER**NLLC*AL**GG*ALQVCCVASFVPKRFIRPG*SIC*SXXXXXXXXXPLHVRR*VVKSCSG* 265 +W SVVSS*AESQFEIFE *NL C*AL G LQV A FV + FIR *SI *SLF AALF*F LHVR *V K CS * Subject 1797 LWPSVVSS*AESQFEIFEMW*NLFC*ALLWGCKTLQVSYSAGFVSRCFIRLS*SIY*SLFPAALF*FSLHVR**VAKFCSS* 2042
Rupestris stem pitting associated virus strain Syrah, complete genome
Sequence ID: AY368590.1 Length: 8742 Number of Matches: 10
Range 1: 1801 to 2160 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
207.9 bits(452) | 0.0 | 91/120(76%) | 0/120(0%) | Plus/Plus |
Query 24 GFQWSLLKQRVNLKFLKGSETSFVELSSEVARLYKSVVLQALSPSASSGLAKVYVDHSSSQLCSDSHFTSDDELSNPALANDLTFEELLPGDFQGSQTAEQIACAHPTNDALRIDLAPPS 383 G QW LLKQR+NLKFLKGSETSFVELS VA+LYKSV+LQ SP+A SGLA+VYVDHSSSQLCS SHF SDDEL NPALA+++T E L D QG QT EQ ACAHP NDAL IDLAPPS Subject 1801 GLQWFLLKQRINLKFLKGSETSFVELSCGVAKLYKSVILQVSSPNALSGLARVYVDHSSSQLCSGSHFMSDDELPNPALADNITSEASLSEDCQGFQTVEQAACAHPINDALCIDLAPPS 2160
Range 2: 1808 to 2158 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
170.1 bits(365) | 0.0 | 82/117(70%) | 0/117(0%) | Plus/Plus |
Query 31 SGLFLSRESI*NF*KVVKPPLLSSLVRWLGFTSLLCCKLCPQALHQAWLKYMLITLPRSFVLIPTSRQTMSCQILLWLMI*PLKNYYQETFKDLRLQSKSHVPIPQMMLFALIWLHR 381 SG FL+RE I*NF*KVVKPPL +SLV FTS L CK Q L+QA L+YMLITLPRSFVL PTS Q MSCQILL L+I L+ +YQ+T KD +L SK HVPIP MMLFALIWLHR Subject 1808 SGFFLNRE*I*NF*KVVKPPL*NSLVGLQNFTSQLFCKFRLQMLYQA*LEYMLITLPRSFVLAPTSCQMMSCQILL*LIILLLRRHYQKTVKDSKL*SKPHVPIP*MMLFALIWLHR 2158
Range 3: 1808 to 2035 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
121.1 bits(258) | 0.0 | 57/76(75%) | 0/76(0%) | Minus/Minus |
Query 31 EQDLTTHRLT*SGNQNKAARKSDQHIL*PGLMKRLGTKLATQQTCKA*PPH*RAQQRRFHYLSKISN*LSA*EETT 258 EQDL TH LT*SG+QNKAARKSDQHIL* GL+K L TKLA TCK PH R QRRFHYLSKISN S *EETT Subject 1808 EQDLATHHLT*SGSQNKAARKSDQHIL*LGLIKHLETKLAK*LTCKVLQPHKRVLQRRFHYLSKISNLFSV*EETT 2035
Range 4: 2074 to 2157 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.8 bits(109) | 0.0 | 23/28(82%) | 0/28(0%) | Minus/Minus |
Query 297 RWSQINAKSIICGMGTCDLLCSLRSLKV 380 RWSQINAKSII GMGTC LL SL SL V Subject 2074 RWSQINAKSIIYGMGTCGLLYSLESLTV 2157
Range 5: 1917 to 2159 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
113.8 bits(242) | 0.0 | 58/81(72%) | 0/81(0%) | Minus/Minus |
Query 140 DGGARSMRRASFVGWAHAICSAV*DP*KSPGNNSSKVRSLARAGFDNSSSDVKWXXXXXXXXXXSTYTLARPDEALGDKAC 382 DGGA+SM+RASF+GWAHA CS V +P*+S N++S+V ARAGF NSSSD+KWE EQSCEEE*STYTLARPD+A GD+ C Subject 1917 DGGAKSMQRASFMGWAHAACSTVWNP*QSSDNDASEVILSARAGFGNSSSDMKWEPEQSCEEE*STYTLARPDKAFGDETC 2159
Range 6: 1800 to 1868 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
47.3 bits(97) | 0.0 | 18/23(78%) | 0/23(0%) | Minus/Minus |
Query 23 KEVSLPFKNFKLTLCLRRDH*KP 91 KEVSLPFKNFK LCLRR+H +P Subject 1800 KEVSLPFKNFKFILCLRRNHWRP 1868
Range 7: 1780 to 2019 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
108.3 bits(230) | 0.0 | 51/80(64%) | 0/80(0%) | Minus/Minus |
Query 3 LIV*REVGIRTKLRGRVINIYFSQA**SAWGQSLQHNRLVKPSHLTRELNKGGFTTFQKFQIDSLLKKRPLKTKHTQHIA 242 LI+* EVG RTKLRGRVINIY S A**S W ++LQ+N LVK + TRE KGGFTTFQKFQI SL KK+PL+ + ++ Subject 1780 LII*HEVGARTKLRGRVINIYSS*A**SIWRRNLQNN*LVKFCNPTREFYKGGFTTFQKFQIYSLFKKKPLEATKMEELS 2019
Range 8: 2099 to 2158 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.9 bits(107) | 0.0 | 17/20(85%) | 0/20(0%) | Minus/Minus |
Query 322 TVEPDQCEEHHLWDGHMRFA 381 TVEP+QC+EHHLWDGHMR A Subject 2099 TVEPNQCKEHHLWDGHMRLA 2158
Range 9: 1797 to 2042 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
91.8 bits(194) | 0.0 | 58/82(71%) | 0/82(0%) | Plus/Plus |
Query 20 VWFSVVSS*AESQFEIFER**NLLC*AL**GG*ALQVCCVASFVPKRFIRPG*SIC*SXXXXXXXXXPLHVRR*VVKSCSG* 265 +W VVSS* E++FEIFER**NLLC L G LQV ASFV K FIRP *SIC*SLFLAALF PLHVR *V KSCS * Subject 1797 LWPPVVSS*TENKFEIFER**NLLCRTLLWGCKTLQVSYFASFVSKCFIRPS*SIC*SLFLAALFWLPLHVR**VAKSCSS* 2042
Grapevine rupestris stem pitting associated virus isolate TEMP BR replicase, 24.4 kDa protein, 12.8 kDa protein, 8.4 kDa protein, and 28 kDa protein genes, complete cds
Sequence ID: KX925556.1 Length: 8700 Number of Matches: 1
Range 1: 1772 to 2008 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
77.8 bits(165) | 0.0 | 36/79(46%) | 0/79(0%) | Plus/Plus |
Query 6 YVLGVFGFQWSLLKQRVNLKFLKGSETSFVELSSEVARLYKSVVLQALSPSASSGLAKVYVDHSSSQLCSDSHFTSDDE 242 Y G QW +LK+R NLKFLK +SF LS EV ++YKS+VLQA P A L KV++ S S S+DE Subject 1772 YCFNSCGLQWFILKRRSNLKFLKDRASSFASLSCEVIKIYKSIVLQATLPEALLSLTKVFIRDSDLNDAFTSELASNDE 2008
Rupestris stem pitting associated virus strain SG1, complete genome
Sequence ID: AY881626.1 Length: 8742 Number of Matches: 1
Range 1: 1783 to 2019 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
77.3 bits(164) | 0.0 | 38/79(48%) | 0/79(0%) | Plus/Plus |
Query 6 YVLGVFGFQWSLLKQRVNLKFLKGSETSFVELSSEVARLYKSVVLQALSPSASSGLAKVYVDHSSSQLCSDSHFTSDDE 242 Y G QW LLK+R NLKFLK +SF LS EV + YKSVVLQA P A L KV++ S +S S DE Subject 1783 YCFNSCGLQWFLLKRRSNLKFLKDRVSSFANLSCEVIKAYKSVVLQATLPEALLSLTKVFIRDSDLNGAFNSELASHDE 2019
Grapevine rupestris stem pitting associated virus isolate GRSPaV LSL, complete genome
Sequence ID: KR054735.1 Length: 8754 Number of Matches: 2
Range 1: 1795 to 2019 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
84.6 bits(180) | 0.0 | 36/75(48%) | 0/75(0%) | Plus/Plus |
Query 18 VFGFQWSLLKQRVNLKFLKGSETSFVELSSEVARLYKSVVLQALSPSASSGLAKVYVDHSSSQLCSDSHFTSDDE 242 + G QW LL +R NL+FL ++SF +LS +VA++Y VV Q P+ASSGL +VY+DHS S S+ HF + E Subject 1795 ICGLQWFLLCRRANLRFLCDRKSSFADLSCQVAKIYNLVVAQVTLPNASSGLIQVYIDHSRSNKNSNPHFAATGE 2019
Range 2: 1789 to 2004 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
50.1 bits(103) | 0.0 | 26/72(36%) | 0/72(0%) | Minus/Minus |
Query 12 EVGIRTKLRGRVINIYFSQA**SAWGQSLQHNRLVKPSHLTRELNKGGFTTFQKFQIDSLLKKRPLKTKHTQ 227 +V I +R VIN+ +Q ** +L +N+++ HLT ++ KGG + QK +I S +K+PLKT + + Subject 1789 KVWIGILVRAGVINVNLNQT**CIR*CNLCYNQVINLRHLTGKVGKGGLSVTQKPEIGSPAEKKPLKTTNVE 2004
Nucleotide Sequence (303 letters)
Query ID: | ds2016-133_14 |
Query definition: | No definition line |
Query length: | 603 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
211.8 | 1312.1 | 55% | 2.093e-53 | 84% | AM180420.1 | |
211.8 | 1326.8 | 55% | 2.093e-53 | 86% | AM180429.1 | |
211.8 | 1106.6 | 41% | 2.093e-53 | 71% | AY368172.2 | |
211.8 | 1352.0 | 55% | 2.093e-53 | 88% | DQ364984.1 | |
211.8 | 1361.6 | 55% | 2.093e-53 | 89% | DQ364990.1 |
Alignments
Rupestris stem pitting associated virus partial CP gene for coat protein, genomic RNA, isolate RSPaV BE
Sequence ID: AM180420.1 Length: 670 Number of Matches: 11
Range 1: 246 to 524 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
211.8 bits(456) | 0.0 | 85/93(91%) | 0/93(0%) | Minus/Plus |
Query 2 WAKKGFNENEKFDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF 280 + + G EN +FDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF Subject 246 FGESGIAENAQFDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF 524
Range 2: 257 to 523 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
188.9 bits(406) | 0.0 | 82/89(92%) | 0/89(0%) | Plus/Minus |
Query 3 NFSFSLNPFLAQLAGGIPVSKWIFHTIFA*YMQNLRSVVTSLIIPAISDLFNSQKGLLPIRVDL*ELPTSEQWRAMSIATSNFSFSLNP 269 NFSFSLNPFLAQLAGGIPVSKW+FHTIFA*YMQNLRSVVTSLIIPAISD FNSQKGLLPIRVDL ELPTSEQWRAMSIATSN +FS P Subject 257 NFSFSLNPFLAQLAGGIPVSKWMFHTIFA*YMQNLRSVVTSLIIPAISDRFNSQKGLLPIRVDLCELPTSEQWRAMSIATSNCAFSAMP 523
Range 3: 267 to 524 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
181.1 bits(389) | 0.0 | 74/86(86%) | 0/86(0%) | Plus/Minus |
Query 2 KLFILIKSFLGPISWWYSRLQMDIPHDFCIVHAKSAQCGHLSYNSSNFRPI*LAEGAFTNQG*PLRTSHIRAVASNVYCNIKLFIL 259 KLFILIKSFLGPISWWYSRLQMD+PH+FC+VHAKSAQCG+L YNSSNFRPI*LAEGA TN G PL TSHIR VA NVYCNIKL IL Subject 267 KLFILIKSFLGPISWWYSRLQMDVPHNFCVVHAKSAQCGYLPYNSSNFRPI*LAEGALTN*GRPL*TSHIRTVAGNVYCNIKLRIL 524
Range 4: 268 to 525 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
171.5 bits(368) | 0.0 | 72/86(84%) | 0/86(0%) | Plus/Minus |
Query 1 QTFHSH*ILSWPN*LVVFPSPNGYSTRFLHSTCKICAVWSPLL*FQQFQTYLTRRRGFYQSGLTSENFPHQSSGEQCLLQHQTFHS 258 QTFHSH*ILSWPN*LVVFPSPNG ST+FL STCKICAVW P L*FQQFQT LTRRRG YQ G T NFPHQ+SG QCLLQHQT HS Subject 268 QTFHSH*ILSWPN*LVVFPSPNGCSTQFLRSTCKICAVWLPPL*FQQFQTDLTRRRGSYQLG*TFVNFPHQNSGGQCLLQHQTAHS 525
Range 5: 278 to 523 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
164.2 bits(352) | 0.0 | 69/82(84%) | 0/82(0%) | Minus/Plus |
Query 3 V*CCNRHCSPLL*CGKFSEVNPDW*KPLLRVK*V*NCWNYKRGDHTAQILHVLCKNRVEYPFGDGNTTS*LGQERI**E*KV 248 V*CCNRHC PL *CGKF++V P+W*+PLLRVK V*NCWNYK G+HTAQILHVL KN VE+PFGDGNTTS*LGQERI**E*KV Subject 278 V*CCNRHCPPLF*CGKFTKVYPNW*EPLLRVKSV*NCWNYKGGNHTAQILHVLRKNCVEHPFGDGNTTS*LGQERI**E*KV 523
Range 6: 319 to 525 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
144.0 bits(308) | 0.0 | 61/69(88%) | 0/69(0%) | Minus/Plus |
Query 1 WEVLRGQP*LVKAPSAS*IGLKLLEL*ER*PHCADFACTMQKSCGISIWRREYHQLIGPRKDLMRMKSL 207 WEV +G P*LV+APSAS*IGLKLLEL* R*PHCADFACT QK CG SIWRREYHQLIGPRKDLMRMKSL Subject 319 WEVHKGLP*LVRAPSAS*IGLKLLEL*GR*PHCADFACTTQKLCGTSIWRREYHQLIGPRKDLMRMKSL 525
Range 7: 468 to 524 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.8 bits(109) | 0.0 | 19/19(100%) | 0/19(0%) | Minus/Plus |
Query 245 TGIPPANWAKKGFNENEKF 301 TGIPPANWAKKGFNENEKF Subject 468 TGIPPANWAKKGFNENEKF 524
Range 8: 468 to 524 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.0 bits(105) | 0.0 | 19/19(100%) | 0/19(0%) | Plus/Minus |
Query 245 KLFILIKSFLGPISWWYSR 301 KLFILIKSFLGPISWWYSR Subject 468 KLFILIKSFLGPISWWYSR 524
Range 9: 466 to 525 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
50.1 bits(103) | 0.0 | 20/20(100%) | 0/20(0%) | Plus/Minus |
Query 244 QTFHSH*ILSWPN*LVVFPS 303 QTFHSH*ILSWPN*LVVFPS Subject 466 QTFHSH*ILSWPN*LVVFPS 525
Rupestris stem pitting associated virus partial CP gene for coat protein, genomic RNA, isolate RSPaV CH S4G
Sequence ID: AM180429.1 Length: 670 Number of Matches: 11
Range 1: 246 to 524 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
211.8 bits(456) | 0.0 | 85/93(91%) | 0/93(0%) | Minus/Plus |
Query 2 WAKKGFNENEKFDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF 280 + + G EN +FDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF Subject 246 FGESGIAENAQFDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF 524
Range 2: 257 to 523 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
184.4 bits(396) | 0.0 | 82/89(92%) | 0/89(0%) | Plus/Minus |
Query 3 NFSFSLNPFLAQLAGGIPVSKWIFHTIFA*YMQNLRSVVTSLIIPAISDLFNSQKGLLPIRVDL*ELPTSEQWRAMSIATSNFSFSLNP 269 NFSFSLNPFLAQLAGGIPVSK +FHTIFA*YMQNLRSVVTSLIIPAISD FNSQKGLLPIRVDL*ELPTSEQWRAMSIATSN +FS P Subject 257 NFSFSLNPFLAQLAGGIPVSK*MFHTIFA*YMQNLRSVVTSLIIPAISDRFNSQKGLLPIRVDL*ELPTSEQWRAMSIATSNCAFSAMP 523
Range 3: 270 to 524 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
183.9 bits(395) | 0.0 | 74/85(87%) | 0/85(0%) | Plus/Minus |
Query 2 KLFILIKSFLGPISWWYSRLQMDIPHDFCIVHAKSAQCGHLSYNSSNFRPI*LAEGAFTNQG*PLRTSHIRAVASNVYCNIKLFI 256 KLFILIKSFLGPISWWYSRLQM++PHDFC+VHAKSAQCG+L YNSSNFRPI*LAEGA TN G*PLRTSHIR VA NVYCNI+L I Subject 270 KLFILIKSFLGPISWWYSRLQMNVPHDFCVVHAKSAQCGYLPYNSSNFRPI*LAEGALTN*G*PLRTSHIRTVAGNVYCNIELRI 524
Range 4: 271 to 525 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
175.6 bits(377) | 0.0 | 73/85(86%) | 0/85(0%) | Plus/Minus |
Query 1 QTFHSH*ILSWPN*LVVFPSPNGYSTRFLHSTCKICAVWSPLL*FQQFQTYLTRRRGFYQSGLTSENFPHQSSGEQCLLQHQTFH 255 QTFHSH*ILSWPN*LVVFPSPN STRFL STCKICAVW P L*FQQFQT LTRRRG YQ GLTSENFPHQ+SG QCLLQH+T H Subject 271 QTFHSH*ILSWPN*LVVFPSPNECSTRFLRSTCKICAVWLPPL*FQQFQTDLTRRRGSYQLGLTSENFPHQNSGGQCLLQHRTAH 525
Range 5: 284 to 523 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
168.8 bits(362) | 0.0 | 70/80(88%) | 0/80(0%) | Minus/Plus |
Query 3 CCNRHCSPLL*CGKFSEVNPDW*KPLLRVK*V*NCWNYKRGDHTAQILHVLCKNRVEYPFGDGNTTS*LGQERI**E*KV 242 CCNRHC PL *CGKFSEVNP+W*+PLLRVK V*NCWNYK G+HTAQILHVL KNRVE+ FGDGNTTS*LGQERI**E*KV Subject 284 CCNRHCPPLF*CGKFSEVNPNW*EPLLRVKSV*NCWNYKGGNHTAQILHVLRKNRVEHSFGDGNTTS*LGQERI**E*KV 523
Range 6: 319 to 525 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
151.8 bits(325) | 0.0 | 64/69(93%) | 0/69(0%) | Minus/Plus |
Query 1 WEVLRGQP*LVKAPSAS*IGLKLLEL*ER*PHCADFACTMQKSCGISIWRREYHQLIGPRKDLMRMKSL 207 WEVLRGQP*LV+APSAS*IGLKLLEL* R*PHCADFACT QKSCG IWRREYHQLIGPRKDLMRMKSL Subject 319 WEVLRGQP*LVRAPSAS*IGLKLLEL*GR*PHCADFACTTQKSCGTFIWRREYHQLIGPRKDLMRMKSL 525
Range 7: 468 to 524 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.8 bits(109) | 0.0 | 19/19(100%) | 0/19(0%) | Minus/Plus |
Query 245 TGIPPANWAKKGFNENEKF 301 TGIPPANWAKKGFNENEKF Subject 468 TGIPPANWAKKGFNENEKF 524
Range 8: 468 to 524 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.0 bits(105) | 0.0 | 19/19(100%) | 0/19(0%) | Plus/Minus |
Query 245 KLFILIKSFLGPISWWYSR 301 KLFILIKSFLGPISWWYSR Subject 468 KLFILIKSFLGPISWWYSR 524
Range 9: 466 to 525 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
50.1 bits(103) | 0.0 | 20/20(100%) | 0/20(0%) | Plus/Minus |
Query 244 QTFHSH*ILSWPN*LVVFPS 303 QTFHSH*ILSWPN*LVVFPS Subject 466 QTFHSH*ILSWPN*LVVFPS 525
Rupestris stem pitting associated virus isolate RSPaV PN, complete genome
Sequence ID: AY368172.2 Length: 8743 Number of Matches: 9
Range 1: 8037 to 8315 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
211.8 bits(456) | 0.0 | 85/93(91%) | 0/93(0%) | Minus/Plus |
Query 2 WAKKGFNENEKFDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF 280 + + G EN +FDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF Subject 8037 FGESGIAENAQFDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF 8315
Range 2: 8048 to 8314 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
188.5 bits(405) | 0.0 | 81/89(91%) | 0/89(0%) | Plus/Minus |
Query 3 NFSFSLNPFLAQLAGGIPVSKWIFHTIFA*YMQNLRSVVTSLIIPAISDLFNSQKGLLPIRVDL*ELPTSEQWRAMSIATSNFSFSLNP 269 NFSFSLNPFLAQLAGGIPVSKW+FHTIFA*YMQNLRSVVTSLIIPAISDLFNSQKGLLPI+VDL ELPTSEQWRA+SIATSN +FS P Subject 8048 NFSFSLNPFLAQLAGGIPVSKWMFHTIFA*YMQNLRSVVTSLIIPAISDLFNSQKGLLPIKVDLWELPTSEQWRAISIATSNCAFSAMP 8314
Range 3: 8058 to 8315 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
161.4 bits(346) | 0.0 | 63/86(73%) | 0/86(0%) | Plus/Minus |
Query 2 KLFILIKSFLGPISWWYSRLQMDIPHDFCIVHAKSAQCGHLSYNSSNFRPI*LAEGAFTNQG*PLRTSHIRAVASNVYCNIKLFIL 259 KLFILIKS LGP+SWWYSRLQMD+PH+ C+VHAKSAQCGH YNSSNFRP+* AE A TNQG*PL ++I AVA N+Y N++L IL Subject 8058 KLFILIKSLLGPVSWWYSRLQMDVPHNLCVVHAKSAQCGHFPYNSSNFRPV*FAERALTNQG*PLGATYIGAVAGNIYRNVELRIL 8315
Range 4: 8059 to 8316 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
137.6 bits(294) | 0.0 | 61/86(71%) | 0/86(0%) | Plus/Minus |
Query 1 QTFHSH*ILSWPN*LVVFPSPNGYSTRFLHSTCKICAVWSPLL*FQQFQTYLTRRRGFYQSGLTSENFPHQSSGEQCLLQHQTFHS 258 QTFHSH*I SWP+*LVVFPSPNG ST+ L STCKICAVWS L*FQQFQT L RR+G YQS LT ++ H+SSG Q L Q +T HS Subject 8059 QTFHSH*IPSWPS*LVVFPSPNGCSTQSLRSTCKICAVWSLPL*FQQFQTCLIRRKGSYQSRLTFGSYLHRSSGGQYLSQRRTAHS 8316
Range 5: 8078 to 8314 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
133.9 bits(286) | 0.0 | 58/79(73%) | 0/79(0%) | Minus/Plus |
Query 3 CNRHCSPLL*CGKFSEVNPDW*KPLLRVK*V*NCWNYKRGDHTAQILHVLCKNRVEYPFGDGNTTS*LGQERI**E*KV 239 C+R+C PLL C +VN DW*+P LR+K V*NCWNYK DHTAQILHVL K+ VE+PFGDGNTTS*LGQE I**E*KV Subject 8078 CDRYCPPLLRCR*LPKVNLDW*EPFLRIKQV*NCWNYKGSDHTAQILHVLRKDCVEHPFGDGNTTS*LGQEGI**E*KV 8314
Range 6: 8122 to 8316 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
124.8 bits(266) | 0.0 | 52/65(80%) | 0/65(0%) | Minus/Plus |
Query 1 RGQP*LVKAPSAS*IGLKLLEL*ER*PHCADFACTMQKSCGISIWRREYHQLIGPRKDLMRMKSL 195 +GQP*LV+A SA+* GLKLLEL* +*PHCADFACT Q+ CG SIWRREYHQL GPR+DLMRMKSL Subject 8122 KGQP*LVRALSAN*TGLKLLEL*GK*PHCADFACTTQRLCGTSIWRREYHQLTGPRRDLMRMKSL 8316
Range 7: 8259 to 8315 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.8 bits(109) | 0.0 | 19/19(100%) | 0/19(0%) | Minus/Plus |
Query 245 TGIPPANWAKKGFNENEKF 301 TGIPPANWAKKGFNENEKF Subject 8259 TGIPPANWAKKGFNENEKF 8315
Rupestris stem pitting associated virus isolate PGD2 28 kDa coat protein gene, complete cds
Sequence ID: DQ364984.1 Length: 867 Number of Matches: 11
Range 1: 311 to 589 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
211.8 bits(456) | 0.0 | 85/93(91%) | 0/93(0%) | Minus/Plus |
Query 2 WAKKGFNENEKFDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF 280 + + G EN +FDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF Subject 311 FGESGIAENAQFDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF 589
Range 2: 322 to 588 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
191.2 bits(411) | 0.0 | 83/89(93%) | 0/89(0%) | Plus/Minus |
Query 3 NFSFSLNPFLAQLAGGIPVSKWIFHTIFA*YMQNLRSVVTSLIIPAISDLFNSQKGLLPIRVDL*ELPTSEQWRAMSIATSNFSFSLNP 269 NFSFSLNPFLAQLAGGIPVSKWIFHTIFA*YMQNLRSVVTSLIIPAISD FNSQKGLLPI+VDL*ELPTSEQWRAMSIATSN +FS P Subject 322 NFSFSLNPFLAQLAGGIPVSKWIFHTIFA*YMQNLRSVVTSLIIPAISDRFNSQKGLLPIKVDL*ELPTSEQWRAMSIATSNCAFSAMP 588
Range 3: 335 to 589 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
186.2 bits(400) | 0.0 | 76/85(89%) | 0/85(0%) | Plus/Minus |
Query 2 KLFILIKSFLGPISWWYSRLQMDIPHDFCIVHAKSAQCGHLSYNSSNFRPI*LAEGAFTNQG*PLRTSHIRAVASNVYCNIKLFI 256 KLFILIKSFLGPISWWYSRLQMDIPH+FCIVHAKSAQCG+L YNSSNFRP+*LAEGA TN G*PLRTSHIR VA NVYCNIKL I Subject 335 KLFILIKSFLGPISWWYSRLQMDIPHNFCIVHAKSAQCGYLPYNSSNFRPV*LAEGALTN*G*PLRTSHIRTVAGNVYCNIKLRI 589
Range 4: 336 to 590 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
183.4 bits(394) | 0.0 | 75/85(88%) | 0/85(0%) | Plus/Minus |
Query 1 QTFHSH*ILSWPN*LVVFPSPNGYSTRFLHSTCKICAVWSPLL*FQQFQTYLTRRRGFYQSGLTSENFPHQSSGEQCLLQHQTFH 255 QTFHSH*ILSWPN*LVVFPSPNGYST+FLHSTCKICAVW P L*FQQFQT LTRRRG YQ LTSENFPHQ+SG QCLLQHQT H Subject 336 QTFHSH*ILSWPN*LVVFPSPNGYSTQFLHSTCKICAVWLPPL*FQQFQTGLTRRRGSYQLRLTSENFPHQNSGGQCLLQHQTAH 590
Range 5: 343 to 588 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
174.3 bits(374) | 0.0 | 73/82(89%) | 0/82(0%) | Minus/Plus |
Query 3 V*CCNRHCSPLL*CGKFSEVNPDW*KPLLRVK*V*NCWNYKRGDHTAQILHVLCKNRVEYPFGDGNTTS*LGQERI**E*KV 248 V*CCNRHC PL *CGKFSEVN +W*+PLLRVK V*NCWNYK G+HTAQILHVLCKN VEYPFGDGNTTS*LGQERI**E*KV Subject 343 V*CCNRHCPPLF*CGKFSEVNLNW*EPLLRVKPV*NCWNYKGGNHTAQILHVLCKNCVEYPFGDGNTTS*LGQERI**E*KV 588
Range 6: 384 to 590 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
154.6 bits(331) | 0.0 | 65/69(94%) | 0/69(0%) | Minus/Plus |
Query 1 WEVLRGQP*LVKAPSAS*IGLKLLEL*ER*PHCADFACTMQKSCGISIWRREYHQLIGPRKDLMRMKSL 207 WEVLRGQP*LV+APSAS* GLKLLEL* R*PHCADFACTMQK CGISIWRREYHQLIGPRKDLMRMKSL Subject 384 WEVLRGQP*LVRAPSAS*TGLKLLEL*GR*PHCADFACTMQKLCGISIWRREYHQLIGPRKDLMRMKSL 590
Range 7: 533 to 589 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.8 bits(109) | 0.0 | 19/19(100%) | 0/19(0%) | Minus/Plus |
Query 245 TGIPPANWAKKGFNENEKF 301 TGIPPANWAKKGFNENEKF Subject 533 TGIPPANWAKKGFNENEKF 589
Range 8: 533 to 589 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.0 bits(105) | 0.0 | 19/19(100%) | 0/19(0%) | Plus/Minus |
Query 245 KLFILIKSFLGPISWWYSR 301 KLFILIKSFLGPISWWYSR Subject 533 KLFILIKSFLGPISWWYSR 589
Range 9: 531 to 590 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
50.1 bits(103) | 0.0 | 20/20(100%) | 0/20(0%) | Plus/Minus |
Query 244 QTFHSH*ILSWPN*LVVFPS 303 QTFHSH*ILSWPN*LVVFPS Subject 531 QTFHSH*ILSWPN*LVVFPS 590
Rupestris stem pitting associated virus isolate NE423TP I 28 kDa coat protein gene, complete cds
Sequence ID: DQ364990.1 Length: 867 Number of Matches: 11
Range 1: 311 to 589 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
211.8 bits(456) | 0.0 | 85/93(91%) | 0/93(0%) | Minus/Plus |
Query 2 WAKKGFNENEKFDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF 280 + + G EN +FDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF Subject 311 FGESGIAENAQFDVAIDIARHCSDVGSSQRSTLIGKSPFCELNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLETGIPPANWAKKGFNENEKF 589
Range 2: 322 to 588 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
192.6 bits(414) | 0.0 | 84/89(94%) | 0/89(0%) | Plus/Minus |
Query 3 NFSFSLNPFLAQLAGGIPVSKWIFHTIFA*YMQNLRSVVTSLIIPAISDLFNSQKGLLPIRVDL*ELPTSEQWRAMSIATSNFSFSLNP 269 NFSFSLNPFLAQLAGGIPVSKWIFHTIFA*YMQNLRSVVTSLIIPAISD FNSQKGLLPIRVDL*ELPTSEQWRAMSIATSN +FS P Subject 322 NFSFSLNPFLAQLAGGIPVSKWIFHTIFA*YMQNLRSVVTSLIIPAISDRFNSQKGLLPIRVDL*ELPTSEQWRAMSIATSNCAFSAMP 588
Range 3: 336 to 590 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
187.1 bits(402) | 0.0 | 76/85(89%) | 0/85(0%) | Plus/Minus |
Query 1 QTFHSH*ILSWPN*LVVFPSPNGYSTRFLHSTCKICAVWSPLL*FQQFQTYLTRRRGFYQSGLTSENFPHQSSGEQCLLQHQTFH 255 QTFHSH*ILSWPN*LVVFPSPNGYST+FLHSTCKICAVW P L*FQQFQT LTRRRG YQ GLTSENFPHQ+SG QCLLQHQT H Subject 336 QTFHSH*ILSWPN*LVVFPSPNGYSTQFLHSTCKICAVWLPPL*FQQFQTGLTRRRGSYQLGLTSENFPHQNSGGQCLLQHQTAH 590
Range 4: 335 to 589 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
186.2 bits(400) | 0.0 | 76/85(89%) | 0/85(0%) | Plus/Minus |
Query 2 KLFILIKSFLGPISWWYSRLQMDIPHDFCIVHAKSAQCGHLSYNSSNFRPI*LAEGAFTNQG*PLRTSHIRAVASNVYCNIKLFI 256 KLFILIKSFLGPISWWYSRLQMDIPH+FCIVHAKSAQCG+L YNSSNFRP+*LAEGA TN G*PLRTSHIR VA NVYCNIKL I Subject 335 KLFILIKSFLGPISWWYSRLQMDIPHNFCIVHAKSAQCGYLPYNSSNFRPV*LAEGALTN*G*PLRTSHIRTVAGNVYCNIKLRI 589
Range 5: 343 to 588 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
178.9 bits(384) | 0.0 | 74/82(90%) | 0/82(0%) | Minus/Plus |
Query 3 V*CCNRHCSPLL*CGKFSEVNPDW*KPLLRVK*V*NCWNYKRGDHTAQILHVLCKNRVEYPFGDGNTTS*LGQERI**E*KV 248 V*CCNRHC PL *CGKFSEVNP+W*+PLLRVK V*NCWNYK G+HTAQILHVLCKN VEYPFGDGNTTS*LGQERI**E*KV Subject 343 V*CCNRHCPPLF*CGKFSEVNPNW*EPLLRVKPV*NCWNYKGGNHTAQILHVLCKNCVEYPFGDGNTTS*LGQERI**E*KV 588
Range 6: 384 to 590 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
154.6 bits(331) | 0.0 | 65/69(94%) | 0/69(0%) | Minus/Plus |
Query 1 WEVLRGQP*LVKAPSAS*IGLKLLEL*ER*PHCADFACTMQKSCGISIWRREYHQLIGPRKDLMRMKSL 207 WEVLRGQP*LV+APSAS* GLKLLEL* R*PHCADFACTMQK CGISIWRREYHQLIGPRKDLMRMKSL Subject 384 WEVLRGQP*LVRAPSAS*TGLKLLEL*GR*PHCADFACTMQKLCGISIWRREYHQLIGPRKDLMRMKSL 590
Range 7: 533 to 589 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.8 bits(109) | 0.0 | 19/19(100%) | 0/19(0%) | Minus/Plus |
Query 245 TGIPPANWAKKGFNENEKF 301 TGIPPANWAKKGFNENEKF Subject 533 TGIPPANWAKKGFNENEKF 589
Range 8: 533 to 589 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.0 bits(105) | 0.0 | 19/19(100%) | 0/19(0%) | Plus/Minus |
Query 245 KLFILIKSFLGPISWWYSR 301 KLFILIKSFLGPISWWYSR Subject 533 KLFILIKSFLGPISWWYSR 589
Range 9: 531 to 590 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
50.1 bits(103) | 0.0 | 20/20(100%) | 0/20(0%) | Plus/Minus |
Query 244 QTFHSH*ILSWPN*LVVFPS 303 QTFHSH*ILSWPN*LVVFPS Subject 531 QTFHSH*ILSWPN*LVVFPS 590
Nucleotide Sequence (613 letters)
Query ID: | ds2016-133_14 |
Query definition: | No definition line |
Query length: | 603 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
366.3 | 1993.6 | 22% | 6.08e-111 | 62% | KR528585.1 | |
360.3 | 1977.6 | 19% | 2.958e-110 | 62% | JX559646.1 | |
372.2 | 1956.1 | 19% | 1.571e-110 | 60% | AF026278.1 | |
373.6 | 1970.7 | 19% | 5.57e-110 | 64% | JQ922417.1 | |
372.7 | 1977.6 | 23% | 5.57e-110 | 63% | HE591388.1 |
Alignments
Grapevine rupestris stem pitting associated virus isolate Tannat Rspav1, complete genome
Sequence ID: KR528585.1 Length: 8595 Number of Matches: 12
Range 1: 7563 to 8021 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
300.7 bits(650) | 0.0 | 146/153(95%) | 0/153(0%) | Minus/Plus |
Query 1 HVDSSSGDHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHTVEEIDYHC*IG*MASQIGKLPGESNEAFXXXXXXXXXXXXXXQPEGSNTSPTLSGVLAKRKRVIENALSKSVDMREVLKHETVVISPNVMDEGAIDELIRAF 459 HVDSSSG HQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVSH VEEIDYHC*IG*MASQIG+LPGESNEAFEARLK+LELARAQKQPEGSNT PTLSG+LAKRKRVIENALSK+VDMREVLKHETVVISPNVMDEGAIDELIRAF Subject 7563 HVDSSSGTHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHKVEEIDYHC*IG*MASQIGRLPGESNEAFEARLKSLELARAQKQPEGSNTPPTLSGILAKRKRVIENALSKTVDMREVLKHETVVISPNVMDEGAIDELIRAF 8021
Range 2: 7409 to 7555 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
125.2 bits(267) | 0.0 | 49/49(100%) | 0/49(0%) | Minus/Plus |
Query 467 PKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSGLGRNCNCHPN 613 PKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSGLGRNCNCHPN Subject 7409 PKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSGLGRNCNCHPN 7555
Range 3: 7411 to 8016 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
366.3 bits(793) | 0.0 | 155/202(77%) | 0/202(0%) | Plus/Minus |
Query 6 HESAHLLLPHP*HSGKSPQFRVSTPPSCPLILRVHFRSPSYAWQAHH*E*VTYWNLLAVFGLELTPELLTGPRMPHLTHPGVSQFDLPFSQFNNDNQFLQQYG*PLKPSNLPTLPSQWMQGPHLGHNFQSKLIRQWP**NNLGDRRYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAIRPITSIKGTKFSDCPNIPELGKDCL 611 HESA LL HP*H GKSP FRVS PPSCP L+VH S WQ H*E*V Y NL A F L LTP +L G + PHL H VSQFDLPFSQFNNDNQFLQ YG*PLKPSNLPT P QWMQ HLG NFQS+LIRQW **+NLG+ YCCLHEQGFGWQLQFLPRPEFQTDNTC+NAIRP+TSIKGTKFSD PNIPELGKDCL Subject 7411 HESARLLHLHP*HLGKSPPFRVSKPPSCPPSLKVHSL*LSCVWQECH*E*VVY*NLPAAFEL*LTPAILAGLQKPHLIHREVSQFDLPFSQFNNDNQFLQPYG*PLKPSNLPTPPLQWMQELHLGRNFQSRLIRQWL**SNLGECHYCCLHEQGFGWQLQFLPRPEFQTDNTCINAIRPMTSIKGTKFSDWPNIPELGKDCL 8016
Range 4: 7415 to 7786 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
255.8 bits(552) | 0.0 | 111/124(90%) | 0/124(0%) | Plus/Minus |
Query 236 DSPGSFPI*LAI*PIQQ**SISSTVWLTPKAFKPPNTSFTVDARASLGPQFSIKIDSPVALIKQPW*SPLLLST*ARIWMAITIPTKTRIPNR*YMYECNQTYNKH*GHKVLRLPKYP*AGKGL 607 DSPGS PI*LAI PI Q**SISST+WLTPKAFKPPNTSFTVDARASLGPQFSIKIDSPVALIKQPW* PLLLST*ARIWMAITIPTKTRIPNR*YMY+CNQTY+KH*GHK+LRL KY G+GL Subject 7415 DSPGSLPI*LAIQPI*Q**SISSTLWLTPKAFKPPNTSFTVDARASLGPQFSIKIDSPVALIKQPW*VPLLLST*ARIWMAITIPTKTRIPNR*YMYKCNQTYDKH*GHKILRLAKYSRTGEGL 7786
Range 5: 7841 to 7981 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
96.4 bits(204) | 0.0 | 42/47(89%) | 0/47(0%) | Plus/Minus |
Query 41 TFGEITTVSCFNTSLMSTDFESAFSITLLRLASTPLRVGDVLEPSGC 181 TFGEITTVSCF TSLMST FESAFSITLLRLA PLRVG VLEPSGC Subject 7841 TFGEITTVSCFKTSLMSTVFESAFSITLLRLARMPLRVGGVLEPSGC 7981
Range 6: 7416 to 7808 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
240.7 bits(519) | 0.0 | 105/131(80%) | 0/131(0%) | Plus/Minus |
Query 214 PGLECLI*LTREFPNLTCHLANSTMIINFFNSMANP*SLQTSQHFLHSGCKGLTWATIFNQN*FASGPDKTTLVIAATAVYMSKDLDGNYNSYQDQNSKQIIHV*MQSDL*QALRAQSSQTAQISLSWERT 606 PG + LI* T + PNLTCH AN TMIINFFN MANP*SLQTSQH L+SGCK TWA IFNQ+*FASG DK TLV A TAVYMSKDLDGNYNSYQDQNSKQIIHV*MQSDL*QALRAQ+SQT QI +W RT Subject 7416 PGFKSLI*FTGKSPNLTCHSANLTMIINFFNLMANP*SLQTSQHLLYSGCKSFTWAAIFNQD*FASGSDKATLVSATTAVYMSKDLDGNYNSYQDQNSKQIIHV*MQSDL*QALRAQNSQTGQIFPNWGRT 7808
Range 7: 7866 to 8021 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
84.0 bits(177) | 0.0 | 32/52(62%) | 0/52(0%) | Plus/Minus |
Query 1 KSTNQLIYCSLIHNIRGNHHSFVFQHLPHVH*F*ECIFDHPLTLGKHTTKSR 156 K TNQL+YC+ IH+I GNHH FVFQ+LPHVH *+CI + L GK+ T+SR Subject 7866 KCTNQLVYCTFIHDIWGNHHRFVFQNLPHVHRL*KCILYNSLAFGKNATESR 8021
Range 8: 7417 to 7695 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
176.6 bits(379) | 0.0 | 76/93(82%) | 0/93(0%) | Minus/Plus |
Query 327 VLSQLRDIWAV*ELCALNACYRSDCIHTCIICLEFWSW*EL*LPSKSLLM*TAVAAITKVVLSGPLANQF*LKIVAQVRPLHPL*RKCWEV*R 605 VL Q +IW V*E CALNAC+RSDCI+TCIICLEFWSW*EL*LPSKSLLM*TAV A+TKV LS PLANQ *LKI AQV+ LHPL*R+CWEV*R Subject 7417 VLPQFGNIWPV*EFCALNACHRSDCIYTCIICLEFWSW*EL*LPSKSLLM*TAVVALTKVALSEPLANQS*LKIAAQVKLLHPL*RRCWEV*R 7695
Range 9: 7753 to 8016 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
118.4 bits(252) | 0.0 | 55/88(62%) | 0/88(0%) | Minus/Plus |
Query 6 WQVKLGNSRVSQMRHSRPG*KLWS*LEPKNSQKVPIRHLLLVVCLPSVRG*SKMHSQNQWT*GRC*NTKLW*FPRMLWMREQ*MS*FV 269 WQVKLG+ V+QMR +PG* WS*LE K+S+KV I HLL V LP+ R +MH Q +WT*GR *NTK W*FP+M WM+ Q* S*FV Subject 7753 WQVKLGDFPVNQMRLLKPG*NRWS*LELKSSRKVLIHHLLSVAFLPNAREL*RMHFQRRWT*GRF*NTKRW*FPQMSWMKVQ*TS*FV 8016
Range 10: 7844 to 8017 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.0 bits(190) | 0.0 | 37/58(64%) | 0/58(0%) | Minus/Plus |
Query 5 ARRFQYVTYS*WCACQA*EGDRKCTLKISGHEGGVETRNCGDFPECYG*GSNR*ADSC 178 A RF Y TYS W +CQ E R+CT K GHEGG ETRN GDFP+C+G* NR ADSC Subject 7844 AGRF*YTTYSQWHSCQTQESYRECTFKDGGHEGGFETRNGGDFPKCHG*RCNRRADSC 8017
Grapevine Rupestris stem pitting virus isolate 3138 07, complete genome
Sequence ID: JX559646.1 Length: 8726 Number of Matches: 12
Range 1: 7581 to 8039 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
298.4 bits(645) | 0.0 | 144/153(94%) | 0/153(0%) | Minus/Plus |
Query 1 HVDSSSGDHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHTVEEIDYHC*IG*MASQIGKLPGESNEAFXXXXXXXXXXXXXXQPEGSNTSPTLSGVLAKRKRVIENALSKSVDMREVLKHETVVISPNVMDEGAIDELIRAF 459 HVD+SSG HQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALG+SHT EEIDY C*IG*MASQIGKLPGESNEAFEARLK+LELAR QKQPEGSNT PTLSGVLAKRKRVIENALSK+VDMREVLKHETVVISPNVMDEGAIDELIRAF Subject 7581 HVDNSSGSHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGISHTTEEIDYRC*IG*MASQIGKLPGESNEAFEARLKSLELARTQKQPEGSNTPPTLSGVLAKRKRVIENALSKTVDMREVLKHETVVISPNVMDEGAIDELIRAF 8039
Range 2: 7427 to 7573 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
125.2 bits(267) | 0.0 | 49/49(100%) | 0/49(0%) | Minus/Plus |
Query 467 PKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSGLGRNCNCHPN 613 PKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSGLGRNCNCHPN Subject 7427 PKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSGLGRNCNCHPN 7573
Range 3: 7429 to 8034 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
360.3 bits(780) | 0.0 | 150/202(74%) | 0/202(0%) | Plus/Minus |
Query 6 HESAHLLLPHP*HSGKSPQFRVSTPPSCPLILRVHFRSPSYAWQAHH*E*VTYWNLLAVFGLELTPELLTGPRMPHLTHPGVSQFDLPFSQFNNDNQFLQQYG*PLKPSNLPTLPSQWMQGPHLGHNFQSKLIRQWP**NNLGDRRYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAIRPITSIKGTKFSDCPNIPELGKDCL 611 HESAHLL PHP*H + FRVS PPSCPL LRVH + PSY W AHH*E* +LLA F TP + G +MPHL G Q DLPF+QFNNDNQFLQ YG* LKPSNLPT P + QGPHLGHNFQSKL QWP**+NLGD YCCLHEQGFGWQLQFLPRPEFQTDNTCMNAIRP+TSIKGTKFSD PNIPELG DCL Subject 7429 HESAHLLHPHP*HLERLQPFRVSIPPSCPLSLRVHSQ*PSYVWPAHH*E*AVCLSLLAAFEF*PTPVISAGLQMPHLIRRGAYQSDLPFNQFNNDNQFLQ*YG*SLKPSNLPTPPLRLTQGPHLGHNFQSKLTLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAIRPMTSIKGTKFSD*PNIPELGNDCL 8034
Range 4: 7439 to 7804 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
246.7 bits(532) | 0.0 | 108/122(89%) | 0/122(0%) | Plus/Minus |
Query 236 DSPGSFPI*LAI*PIQQ**SISSTVWLTPKAFKPPNTSFTVDARASLGPQFSIKIDSPVALIKQPW*SPLLLST*ARIWMAITIPTKTRIPNR*YMYECNQTYNKH*GHKVLRLPKYP*AGK 601 DSPGS PI*LAI*PIQQ *SISS VWL PKAFKPPNTSFTVDARASLGPQFSIKIDSPVALIKQPW* PLLLST*ARIWMAI IPTKTRIPNR YMYECN TY+KH*GHK+LRL KY GK Subject 7439 DSPGSLPI*LAI*PIQQR*SISSVVWLIPKAFKPPNTSFTVDARASLGPQFSIKIDSPVALIKQPW*LPLLLST*ARIWMAIAIPTKTRIPNRQYMYECN*TYDKH*GHKILRLTKYSRTGK 7804
Range 5: 7859 to 7999 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
102.3 bits(217) | 0.0 | 44/47(94%) | 0/47(0%) | Plus/Minus |
Query 41 TFGEITTVSCFNTSLMSTDFESAFSITLLRLASTPLRVGDVLEPSGC 181 TFGEITTVSCFNTSLMST FESAFSITLLRLASTPLRVG V EPSGC Subject 7859 TFGEITTVSCFNTSLMSTVFESAFSITLLRLASTPLRVGGVFEPSGC 7999
Range 6: 7434 to 7826 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
229.3 bits(494) | 0.0 | 101/131(77%) | 0/131(0%) | Plus/Minus |
Query 214 PGLECLI*LTREFPNLTCHLANSTMIINFFNSMANP*SLQTSQHFLHSGCKGLTWATIFNQN*FASGPDKTTLVIAATAVYMSKDLDGNYNSYQDQNSKQIIHV*MQSDL*QALRAQSSQTAQISLSWERT 606 PG +CLI* E NLTCHL NST IINFF+SMANP*SLQTSQH L+ KGLTWATIFNQN* +SGPDK TLV A T VYMSKDLDGN NSYQDQNSKQ IHV*MQ DL*QALRAQ+SQT QI +WE T Subject 7434 PGFKCLI*FAGELTNLTCHLTNSTTIINFFSSMANP*SLQTSQHLLYG*RKGLTWATIFNQN*LSSGPDKATLVTATTVVYMSKDLDGNCNSYQDQNSKQTIHV*MQLDL*QALRAQNSQTDQIFPNWEMT 7826
Range 7: 7884 to 8039 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
88.1 bits(186) | 0.0 | 34/52(65%) | 0/52(0%) | Plus/Minus |
Query 1 KSTNQLIYCSLIHNIRGNHHSFVFQHLPHVH*F*ECIFDHPLTLGKHTTKSR 156 K TNQLIYC+LIH+I +++ FVFQ+LPHVH *ECI ++PLT G+HTT+SR Subject 7884 KCTNQLIYCTLIHDIWRDYNRFVFQYLPHVHCL*ECILNNPLTFGQHTTESR 8039
Range 8: 7435 to 7713 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
175.2 bits(376) | 0.0 | 73/93(78%) | 0/93(0%) | Minus/Plus |
Query 327 VLSQLRDIWAV*ELCALNACYRSDCIHTCIICLEFWSW*EL*LPSKSLLM*TAVAAITKVVLSGPLANQF*LKIVAQVRPLHPL*RKCWEV*R 605 V+SQ +IW+V*E CALNAC+RS+CIHTCI+CLEFWSW*EL LPSKSLLM*T V A+TKV LSGPL +QF*LKIVAQVRPL *R+CWEV*R Subject 7435 VISQFGNIWSV*EFCALNACHRSNCIHTCIVCLEFWSW*ELQLPSKSLLM*TTVVAVTKVALSGPLESQF*LKIVAQVRPLRQP*RRCWEV*R 7713
Range 9: 7771 to 8034 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
116.1 bits(247) | 0.0 | 55/88(62%) | 0/88(0%) | Minus/Plus |
Query 6 WQVKLGNSRVSQMRHSRPG*KLWS*LEPKNSQKVPIRHLLLVVCLPSVRG*SKMHSQNQWT*GRC*NTKLW*FPRMLWMREQ*MS*FV 269 WQV+L +S +QMRH +PG* WS LE K+SQK LL VVC P+VRG +MHSQ QWT*GR *NTK * +M WMR Q*MS*FV Subject 7771 WQVRLVSSPANQMRHLKPG*NHWSWLELKSSQKAQTHRLLSVVCWPNVRGLLRMHSQRQWT*GRY*NTKRL*SLQMSWMRVQ*MS*FV 8034
Range 10: 7613 to 7741 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.9 bits(192) | 0.0 | 34/43(79%) | 0/43(0%) | Minus/Plus |
Query 299 LFYQGHWRINFD*KLWPK*GPCIHCEGSVGRFEGFRG*PYC*R 427 L YQGHWR+NFD*KLWPK*GPC++ +G VGRFEGFR *PY *R Subject 7613 LLYQGHWRVNFD*KLWPK*GPCVNRKGGVGRFEGFRD*PYY*R 7741
Range 11: 7862 to 8035 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
89.0 bits(188) | 0.0 | 37/58(64%) | 0/58(0%) | Minus/Plus |
Query 5 ARRFQYVTYS*WCACQA*EGDRKCTLKISGHEGGVETRNCGDFPECYG*GSNR*ADSC 178 ARR ++ YS WCA Q *EG +CTLK SGHEGG+ETRN + +C+G*G NR*ADSC Subject 7862 ARRLKHTAYSQWCAGQT*EGY*ECTLKDSGHEGGIETRNGCNLSKCHG*GCNR*ADSC 8035
Grapevine Rupestris stem pitting associated virus, complete genome
Sequence ID: AF026278.1 Length: 8725 Number of Matches: 12
Range 1: 7581 to 8039 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
299.4 bits(647) | 0.0 | 145/153(95%) | 0/153(0%) | Minus/Plus |
Query 1 HVDSSSGDHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHTVEEIDYHC*IG*MASQIGKLPGESNEAFXXXXXXXXXXXXXXQPEGSNTSPTLSGVLAKRKRVIENALSKSVDMREVLKHETVVISPNVMDEGAIDELIRAF 459 HVDSSSG+HQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVS TVEEIDYHC*IG*MASQIGKLPGESNEAFEARLK+LELARAQKQPEGSN PTLSG+LAKRKR+IENALSK+VDMREVLKHETVVISPNVMDEGAIDELIRAF Subject 7581 HVDSSSGNHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVSRTVEEIDYHC*IG*MASQIGKLPGESNEAFEARLKSLELARAQKQPEGSNAPPTLSGILAKRKRIIENALSKTVDMREVLKHETVVISPNVMDEGAIDELIRAF 8039
Range 2: 7427 to 7573 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
125.2 bits(267) | 0.0 | 49/49(100%) | 0/49(0%) | Minus/Plus |
Query 467 PKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSGLGRNCNCHPN 613 PKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSGLGRNCNCHPN Subject 7427 PKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSGLGRNCNCHPN 7573
Range 3: 7432 to 8034 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
372.2 bits(806) | 0.0 | 156/201(78%) | 0/201(0%) | Plus/Minus |
Query 6 HESAHLLLPHP*HSGKSPQFRVSTPPSCPLILRVHFRSPSYAWQAHH*E*VTYWNLLAVFGLELTPELLTGPRMPHLTHPGVSQFDLPFSQFNNDNQFLQQYG*PLKPSNLPTLPSQWMQGPHLGHNFQSKLIRQWP**NNLGDRRYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAIRPITSIKGTKFSDCPNIPELGKDC 608 HESA LL HP*H GK P FRVS PPSCP L+VH S WQ H*E*V + NL A F L LTP +L G + PHL H GVSQFDLPFSQFNNDNQFLQQYG*PLKPSNL T PSQWMQGPHLG +FQ KL QWP**+NLGD YCCLHEQGFGWQLQFLPRPEFQTDNTCMNAIRP+TSIKGTKFSD PNIPELGKDC Subject 7432 HESARLLHLHP*HLGKLPPFRVSKPPSCPPSLKVHSL*SSCVWQECH*E*VVH*NLPAAFEL*LTPAILAGLQKPHLIHRGVSQFDLPFSQFNNDNQFLQQYG*PLKPSNLLTPPSQWMQGPHLGRSFQLKLTLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAIRPMTSIKGTKFSDWPNIPELGKDC 8034
Range 4: 7433 to 7804 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
245.3 bits(529) | 0.0 | 109/124(88%) | 0/124(0%) | Plus/Minus |
Query 236 DSPGSFPI*LAI*PIQQ**SISSTVWLTPKAFKPPNTSFTVDARASLGPQFSIKIDSPVALIKQPW*SPLLLST*ARIWMAITIPTKTRIPNR*YMYECNQTYNKH*GHKVLRLPKYP*AGKGL 607 DSPGSFPI*LAI PI Q**SISSTV LTPKAFKPPNTSFTVDARASLGPQFSIKIDSPVAL+KQPW* PLLLST*ARIWMAITIPTKTRIPNR YMYEC+ TY+KH*GHK+LRL +YP A +GL Subject 7433 DSPGSFPI*LAIQPI*Q**SISSTVRLTPKAFKPPNTSFTVDARASLGPQFSIKIDSPVALMKQPW*LPLLLST*ARIWMAITIPTKTRIPNRQYMYECD*TYDKH*GHKILRLAEYPRAREGL 7804
Range 5: 7859 to 7999 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
91.8 bits(194) | 0.0 | 40/47(85%) | 0/47(0%) | Plus/Minus |
Query 41 TFGEITTVSCFNTSLMSTDFESAFSITLLRLASTPLRVGDVLEPSGC 181 TFGEITTVSCF TSLMST FESAFSI LLRLA PLRVG LEPSGC Subject 7859 TFGEITTVSCFKTSLMSTVFESAFSIILLRLARMPLRVGGALEPSGC 7999
Range 6: 7446 to 7826 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
229.7 bits(495) | 0.0 | 100/127(79%) | 0/127(0%) | Plus/Minus |
Query 214 PGLECLI*LTREFPNLTCHLANSTMIINFFNSMANP*SLQTSQHFLHSGCKGLTWATIFNQN*FASGPDKTTLVIAATAVYMSKDLDGNYNSYQDQNSKQIIHV*MQSDL*QALRAQSSQTAQISLS 594 PG + LI* T EFPNLTCH AN TMIINFFNS ANP*SLQTS H LHSGCKGLTWA +FN N* +SGP++ TLVIA TAVYMSKDLDGNYNSYQDQNSKQ IHV*M+ DL*QALRAQ+SQ +IS S Subject 7446 PGFKSLI*FTGEFPNLTCHSANLTMIINFFNSTANP*SLQTS*HLLHSGCKGLTWAAVFN*N*LSSGPNEATLVIATTAVYMSKDLDGNYNSYQDQNSKQTIHV*MRLDL*QALRAQNSQIGRISQS 7826
Range 7: 7884 to 8039 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
84.9 bits(179) | 0.0 | 32/52(62%) | 0/52(0%) | Plus/Minus |
Query 1 KSTNQLIYCSLIHNIRGNHHSFVFQHLPHVH*F*ECIFDHPLTLGKHTTKSR 156 K TNQL+YC+ IH+I GN+H FVFQ+LPHVH *+CI +PL GK+ T+SR Subject 7884 KCTNQLVYCTFIHDIWGNYHRFVFQNLPHVHRL*KCILYNPLAFGKNATESR 8039
Range 8: 7435 to 7713 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
158.2 bits(339) | 0.0 | 71/93(76%) | 0/93(0%) | Minus/Plus |
Query 327 VLSQLRDIWAV*ELCALNACYRSDCIHTCIICLEFWSW*EL*LPSKSLLM*TAVAAITKVVLSGPLANQF*LKIVAQVRPLHPL*RKCWEV*R 605 +L L DI +*E CALNAC+RS+ IHTCI+CLEFWSW*EL*LPSKSLLM*TAV AITKV GPL +QF*LK AQVRPLHPL*R+C EV*R Subject 7435 ILP*LWDIRPI*EFCALNACHRSNRIHTCIVCLEFWSW*EL*LPSKSLLM*TAVVAITKVASLGPLESQF*LKTAAQVRPLHPL*RRC*EV*R 7713
Range 9: 7771 to 8034 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
125.7 bits(268) | 0.0 | 57/88(65%) | 0/88(0%) | Minus/Plus |
Query 6 WQVKLGNSRVSQMRHSRPG*KLWS*LEPKNSQKVPIRHLLLVVCLPSVRG*SKMHSQNQWT*GRC*NTKLW*FPRMLWMREQ*MS*FV 269 WQVKLGNS V+QMR +PG* WS*LE K+S+KV + HLL V LP+ RG +MH Q +WT*GR *NTK W*FP+M WM+ Q* S*FV Subject 7771 WQVKLGNSPVNQMRLLKPG*NRWS*LELKSSRKVLMHHLLSVAFLPNARGL*RMHFQRRWT*GRF*NTKRW*FPQMSWMKVQ*TS*FV 8034
Range 10: 7613 to 7741 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
91.3 bits(193) | 0.0 | 35/43(81%) | 0/43(0%) | Minus/Plus |
Query 299 LFYQGHWRINFD*KLWPK*GPCIHCEGSVGRFEGFRG*PYC*R 427 L + GHWR+NF+*KL PK*GPCIHCEG V RFEGFRG*PYC*R Subject 7613 LLH*GHWRVNFN*KLRPK*GPCIHCEGGVRRFEGFRG*PYC*R 7741
Range 11: 7862 to 8035 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
83.1 bits(175) | 0.0 | 35/58(60%) | 0/58(0%) | Minus/Plus |
Query 5 ARRFQYVTYS*WCACQA*EGDRKCTLKISGHEGGVETRNCGDFPECYG*GSNR*ADSC 178 A RF TYS W +CQ E R+CT K GHEGG ETRN G+FP+C+G* NR ADSC Subject 7862 AGRF*CTTYSQWHSCQTQEDYRECTFKDGGHEGGFETRNGGNFPKCHG*RCNRRADSC 8035
Grapevine rupestris stem pitting associated virus isolate GRSPaV GG, complete genome
Sequence ID: JQ922417.1 Length: 8758 Number of Matches: 12
Range 1: 7581 to 8039 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
297.5 bits(643) | 0.0 | 144/153(94%) | 0/153(0%) | Minus/Plus |
Query 1 HVDSSSGDHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHTVEEIDYHC*IG*MASQIGKLPGESNEAFXXXXXXXXXXXXXXQPEGSNTSPTLSGVLAKRKRVIENALSKSVDMREVLKHETVVISPNVMDEGAIDELIRAF 459 HVDSSSG+HQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVS VEEIDYHC*IG*MASQIGKLPGESNEAFEARLK+LEL RAQKQPEGSN PTLSG+LAKRKRVIENALSK+VDMREVLKHETVVISPNVMDEGAIDELIRAF Subject 7581 HVDSSSGNHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVSRAVEEIDYHC*IG*MASQIGKLPGESNEAFEARLKSLELTRAQKQPEGSNAPPTLSGILAKRKRVIENALSKTVDMREVLKHETVVISPNVMDEGAIDELIRAF 8039
Range 2: 7427 to 7573 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
125.2 bits(267) | 0.0 | 49/49(100%) | 0/49(0%) | Minus/Plus |
Query 467 PKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSGLGRNCNCHPN 613 PKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSGLGRNCNCHPN Subject 7427 PKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSGLGRNCNCHPN 7573
Range 3: 7432 to 8034 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
373.6 bits(809) | 0.0 | 155/201(77%) | 0/201(0%) | Plus/Minus |
Query 6 HESAHLLLPHP*HSGKSPQFRVSTPPSCPLILRVHFRSPSYAWQAHH*E*VTYWNLLAVFGLELTPELLTGPRMPHLTHPGVSQFDLPFSQFNNDNQFLQQYG*PLKPSNLPTLPSQWMQGPHLGHNFQSKLIRQWP**NNLGDRRYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAIRPITSIKGTKFSDCPNIPELGKDC 608 HESA LL HP*H GKSP FRVS PPSCP L+VH PS WQ H*E*V + NL A F L LTP +L G + PHL H VSQFDLPFSQFNNDNQFLQQ+G*PLKPSNLPT PSQW QGPHLG +FQSKL QWP**+NLGD YCCLHEQGFGWQLQFLPRPEFQTDNTCMNAI+P+TSIKGTKFSD P IPELGKDC Subject 7432 HESARLLHLHP*HLGKSPPFRVSKPPSCPPFLKVHSL*PSCVWQECH*E*VVH*NLPAAFEL*LTPAILAGLQKPHLIHRVVSQFDLPFSQFNNDNQFLQQHG*PLKPSNLPTPPSQWTQGPHLGRSFQSKLTLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAIKPMTSIKGTKFSDWPKIPELGKDC 8034
Range 4: 7433 to 7804 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
243.0 bits(524) | 0.0 | 108/124(87%) | 0/124(0%) | Plus/Minus |
Query 236 DSPGSFPI*LAI*PIQQ**SISSTVWLTPKAFKPPNTSFTVDARASLGPQFSIKIDSPVALIKQPW*SPLLLST*ARIWMAITIPTKTRIPNR*YMYECNQTYNKH*GHKVLRLPKYP*AGKGL 607 DSPGSFPI*LAI PI Q**SISST LTPKAFKPPNTSFTVDARASLGPQFSIKIDSPVAL+KQPW* PLLLST*ARIWMAITIPTKTRIPNR YMYEC+ TY+KH*GHK+LRL + P AG+GL Subject 7433 DSPGSFPI*LAIQPI*Q**SISSTARLTPKAFKPPNTSFTVDARASLGPQFSIKIDSPVALMKQPW*LPLLLST*ARIWMAITIPTKTRIPNRQYMYECD*TYDKH*GHKILRLAENPRAGEGL 7804
Range 5: 7859 to 7999 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
94.5 bits(200) | 0.0 | 41/47(87%) | 0/47(0%) | Plus/Minus |
Query 41 TFGEITTVSCFNTSLMSTDFESAFSITLLRLASTPLRVGDVLEPSGC 181 TFGEITTVSCF TSLMST FESAFSITLLRLA PLRVG LEPSGC Subject 7859 TFGEITTVSCFKTSLMSTVFESAFSITLLRLARMPLRVGGALEPSGC 7999
Range 6: 7437 to 7826 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
229.3 bits(494) | 0.0 | 100/130(77%) | 0/130(0%) | Plus/Minus |
Query 214 PGLECLI*LTREFPNLTCHLANSTMIINFFNSMANP*SLQTSQHFLHSGCKGLTWATIFNQN*FASGPDKTTLVIAATAVYMSKDLDGNYNSYQDQNSKQIIHV*MQSDL*QALRAQSSQTAQISLSWER 603 PG + LI* T FPNLTCH AN TMIINFFNS ANP*SLQTSQH LHSG KGLTWA +FNQN* +SGP++ TLVIA TAVYMSKDLDGNYNSYQDQNSKQ IHV*M+ +L*QALRAQ+SQ + S SW R Subject 7437 PGFKSLI*FTG*FPNLTCHSANLTMIINFFNSTANP*SLQTSQHLLHSGRKGLTWAAVFNQN*LSSGPNEATLVIATTAVYMSKDLDGNYNSYQDQNSKQTIHV*MRLNL*QALRAQNSQIGRKSQSWGR 7826
Range 7: 7884 to 8039 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.4 bits(191) | 0.0 | 34/52(65%) | 0/52(0%) | Plus/Minus |
Query 1 KSTNQLIYCSLIHNIRGNHHSFVFQHLPHVH*F*ECIFDHPLTLGKHTTKSR 156 K TNQL+YC+ IH+I GNHH FVFQ+LPHVH F*+CI +PL GK+ T+SR Subject 7884 KCTNQLVYCTFIHDIWGNHHRFVFQNLPHVHRF*KCILYNPLAFGKNATESR 8039
Range 8: 7435 to 7713 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
161.0 bits(345) | 0.0 | 70/93(75%) | 0/93(0%) | Minus/Plus |
Query 327 VLSQLRDIWAV*ELCALNACYRSDCIHTCIICLEFWSW*EL*LPSKSLLM*TAVAAITKVVLSGPLANQF*LKIVAQVRPLHPL*RKCWEV*R 605 +L QL D +*E CALNAC+R + IHTCI+CLEFWSW*EL*LPSKSLLM*TAV AITKV GPL +QF*LK AQVRPL PL*R+CWEV*R Subject 7435 ILPQLWDFRPI*EFCALNACHRFNRIHTCIVCLEFWSW*EL*LPSKSLLM*TAVVAITKVASLGPLESQF*LKTAAQVRPLRPL*RRCWEV*R 7713
Range 9: 7771 to 8034 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
123.0 bits(262) | 0.0 | 56/88(64%) | 0/88(0%) | Minus/Plus |
Query 6 WQVKLGNSRVSQMRHSRPG*KLWS*LEPKNSQKVPIRHLLLVVCLPSVRG*SKMHSQNQWT*GRC*NTKLW*FPRMLWMREQ*MS*FV 269 WQVKLGN V+QMR +PG* WS*LE K+S+KV + HLL V LP+ RG +MH Q +WT*GR *NTK W*FP+M WM+ Q* S*FV Subject 7771 WQVKLGNYPVNQMRLLKPG*NRWS*LELKSSRKVLMHHLLSVAFLPNARGL*RMHFQKRWT*GRF*NTKRW*FPQMSWMKVQ*TS*FV 8034
Range 10: 7613 to 7741 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
92.7 bits(196) | 0.0 | 35/43(81%) | 0/43(0%) | Minus/Plus |
Query 299 LFYQGHWRINFD*KLWPK*GPCIHCEGSVGRFEGFRG*PYC*R 427 L + GHWR+NFD*KL PK*GPC+HCEG VGRFEGFRG*P C*R Subject 7613 LLH*GHWRVNFD*KLRPK*GPCVHCEGGVGRFEGFRG*PCC*R 7741
Range 11: 7862 to 8035 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
88.6 bits(187) | 0.0 | 37/58(64%) | 0/58(0%) | Minus/Plus |
Query 5 ARRFQYVTYS*WCACQA*EGDRKCTLKISGHEGGVETRNCGDFPECYG*GSNR*ADSC 178 A RF TYS W +CQ EG R+CT K GHEGG ETRN GDFP+C+G* NR ADSC Subject 7862 AGRF*CTTYSQWHSCQTQEGYRECTFKNGGHEGGFETRNGGDFPKCHG*RCNRRADSC 8035
Grapevine rupestris stem pitting associated virus complete genome, isolate PG, genomic RNA
Sequence ID: HE591388.1 Length: 8725 Number of Matches: 12
Range 1: 7581 to 8039 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
297.5 bits(643) | 0.0 | 145/153(95%) | 0/153(0%) | Minus/Plus |
Query 1 HVDSSSGDHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHTVEEIDYHC*IG*MASQIGKLPGESNEAFXXXXXXXXXXXXXXQPEGSNTSPTLSGVLAKRKRVIENALSKSVDMREVLKHETVVISPNVMDEGAIDELIRAF 459 HVDSSSG+HQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVS VEEIDYHC*IG*MASQIGKLPGESNEAFEARLK+LELARAQKQPEGSN PTLSG+LAKRKRVIENALSK+VDMREVLKHETVVISPNVMDEGAIDELIRAF Subject 7581 HVDSSSGNHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVSRAVEEIDYHC*IG*MASQIGKLPGESNEAFEARLKSLELARAQKQPEGSNAPPTLSGILAKRKRVIENALSKTVDMREVLKHETVVISPNVMDEGAIDELIRAF 8039
Range 2: 7427 to 7573 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
125.2 bits(267) | 0.0 | 49/49(100%) | 0/49(0%) | Minus/Plus |
Query 467 PKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSGLGRNCNCHPN 613 PKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSGLGRNCNCHPN Subject 7427 PKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSGLGRNCNCHPN 7573
Range 3: 7432 to 8034 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
372.7 bits(807) | 0.0 | 156/201(78%) | 0/201(0%) | Plus/Minus |
Query 6 HESAHLLLPHP*HSGKSPQFRVSTPPSCPLILRVHFRSPSYAWQAHH*E*VTYWNLLAVFGLELTPELLTGPRMPHLTHPGVSQFDLPFSQFNNDNQFLQQYG*PLKPSNLPTLPSQWMQGPHLGHNFQSKLIRQWP**NNLGDRRYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAIRPITSIKGTKFSDCPNIPELGKDC 608 HESA LL HP*H GKSP FRVS PPSCP L+VH PS WQ H*E*V + NL A F L TP +L G R PHL H GVSQFDLPFSQFNNDNQFLQQ+G*PLKPSNL T PSQWMQGPHL +F+SKL QWP**+NLGD YCCLHEQGFGWQLQFLPRPEFQTDNTCMNAIRP+TSIKGTKFSD PNIPELGKDC Subject 7432 HESARLLHLHP*HLGKSPPFRVSKPPSCPPSLKVHSL*PSCVWQECH*E*VVH*NLPAAFEL*PTPAILAGLRKPHLIHRGVSQFDLPFSQFNNDNQFLQQHG*PLKPSNLLTPPSQWMQGPHLDRSFRSKLTLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAIRPMTSIKGTKFSDWPNIPELGKDC 8034
Range 4: 7433 to 7804 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
249.4 bits(538) | 0.0 | 110/124(89%) | 0/124(0%) | Plus/Minus |
Query 236 DSPGSFPI*LAI*PIQQ**SISSTVWLTPKAFKPPNTSFTVDARASLGPQFSIKIDSPVALIKQPW*SPLLLST*ARIWMAITIPTKTRIPNR*YMYECNQTYNKH*GHKVLRLPKYP*AGKGL 607 DSPGSFPI*LAI*PI Q**SISST LTPKAFKPPNTSFTVDARASLGPQFSIKIDSPVAL+KQPW* PLLLST*ARIWMAITIPTKTRIPNR YMYEC+ TY+KH*GHK+LRL +YP AG+GL Subject 7433 DSPGSFPI*LAI*PI*Q**SISSTARLTPKAFKPPNTSFTVDARASLGPQFSIKIDSPVALMKQPW*LPLLLST*ARIWMAITIPTKTRIPNRQYMYECD*TYDKH*GHKILRLAEYPRAGEGL 7804
Range 5: 7859 to 7999 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
94.5 bits(200) | 0.0 | 41/47(87%) | 0/47(0%) | Plus/Minus |
Query 41 TFGEITTVSCFNTSLMSTDFESAFSITLLRLASTPLRVGDVLEPSGC 181 TFGEITTVSCF TSLMST FESAFSITLLRLA PLRVG LEPSGC Subject 7859 TFGEITTVSCFKTSLMSTVFESAFSITLLRLARMPLRVGGALEPSGC 7999
Range 6: 7437 to 7826 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
240.7 bits(519) | 0.0 | 103/130(79%) | 0/130(0%) | Plus/Minus |
Query 214 PGLECLI*LTREFPNLTCHLANSTMIINFFNSMANP*SLQTSQHFLHSGCKGLTWATIFNQN*FASGPDKTTLVIAATAVYMSKDLDGNYNSYQDQNSKQIIHV*MQSDL*QALRAQSSQTAQISLSWER 603 PG E LI* T EFPNLTCHLAN TMIINFFNS ANP*SLQTS H LHSGCKGLTW +F+QN* +SGP++ TLVIA TAVYMSKDLDGNYNSYQDQNSKQ IHV*M+ DL*QALRAQ+SQ +IS SW R Subject 7437 PGFESLI*FTGEFPNLTCHLANLTMIINFFNSTANP*SLQTS*HLLHSGCKGLTWTAVFDQN*LSSGPNEATLVIATTAVYMSKDLDGNYNSYQDQNSKQTIHV*MRLDL*QALRAQNSQIGRISQSWGR 7826
Range 7: 7884 to 8039 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
87.7 bits(185) | 0.0 | 33/52(63%) | 0/52(0%) | Plus/Minus |
Query 1 KSTNQLIYCSLIHNIRGNHHSFVFQHLPHVH*F*ECIFDHPLTLGKHTTKSR 156 K TNQL+YC+ IH+I GNHH FVFQ+LPHVH *+CI +PL GK+ T+SR Subject 7884 KCTNQLVYCTFIHDIWGNHHRFVFQNLPHVHRL*KCILYNPLAFGKNATESR 8039
Range 8: 7435 to 7713 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
157.8 bits(338) | 0.0 | 70/93(75%) | 0/93(0%) | Minus/Plus |
Query 327 VLSQLRDIWAV*ELCALNACYRSDCIHTCIICLEFWSW*EL*LPSKSLLM*TAVAAITKVVLSGPLANQF*LKIVAQVRPLHPL*RKCWEV*R 605 +L QL DI +*E CALNAC+RS+ IHTCI+CLEFWSW*EL*LPSKSLLM*TAV AITKV GPL +QF* K QVRPLHPL*R+C EV*R Subject 7435 ILPQLWDIRPI*EFCALNACHRSNRIHTCIVCLEFWSW*EL*LPSKSLLM*TAVVAITKVASLGPLESQF*SKTAVQVRPLHPL*RRC*EV*R 7713
Range 9: 7771 to 8034 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
126.2 bits(269) | 0.0 | 57/88(65%) | 0/88(0%) | Minus/Plus |
Query 6 WQVKLGNSRVSQMRHSRPG*KLWS*LEPKNSQKVPIRHLLLVVCLPSVRG*SKMHSQNQWT*GRC*NTKLW*FPRMLWMREQ*MS*FV 269 WQVKLGNS V+QMR S+PG* WS LE K+S+KV + HLL V LP+ RG +MH Q +WT*GR *NTK W*FP+M WM+ Q* S*FV Subject 7771 WQVKLGNSPVNQMRLSKPG*NRWSWLELKSSRKVLMHHLLSVAFLPNARGL*RMHFQRRWT*GRF*NTKRW*FPQMSWMKVQ*TS*FV 8034
Range 10: 7862 to 8035 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
88.6 bits(187) | 0.0 | 37/58(64%) | 0/58(0%) | Minus/Plus |
Query 5 ARRFQYVTYS*WCACQA*EGDRKCTLKISGHEGGVETRNCGDFPECYG*GSNR*ADSC 178 A RF TYS W +CQ EG R+CT K GHEGG ETRN GDFP+C+G* NR ADSC Subject 7862 AGRF*CTTYSQWHSCQTQEGYRECTFKDGGHEGGFETRNGGDFPKCHG*RCNRRADSC 8035
Nucleotide Sequence (1006 letters)
Query ID: | ds2016-133_14 |
Query definition: | No definition line |
Query length: | 603 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
398.8 | 2619.9 | 42% | 4.524e-115 | 70% | AB277783.1 | |
399.3 | 2575.9 | 42% | 5.668e-114 | 67% | KX274275.1 | |
398.3 | 2642.5 | 41% | 2.758e-113 | 67% | AY368590.1 | |
361.7 | 1454.6 | 30% | 1.988e-102 | 46% | AB277786.1 | |
358.9 | 1522.6 | 32% | 2.416e-97 | 32% | AB277785.1 |
Alignments
Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OB1
Sequence ID: AB277783.1 Length: 2876 Number of Matches: 17
Range 1: 1837 to 2373 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
398.8 bits(864) | 0.0 | 169/179(94%) | 0/179(0%) | Minus/Plus |
Query 223 HVDSNDGDHQGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HC*MASPPGKLPGESNEAFEARLKSLELARAQKQPTGSNQPPTLGGVLAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIARHCSVVGS 759 HVDSN+GD+ GCLIRATGESILIENCGPSEALAST+KEVLGGLKALGVSHIGEEIDYHC*HC MASPPG+LPGESNEAFEARLKSLELARAQKQP GSNQPP LGG+LAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIARHCS VGS Subject 1837 HVDSNNGDNHGCLIRATGESILIENCGPSEALASTIKEVLGGLKALGVSHIGEEIDYHC*HCHMASPPGRLPGESNEAFEARLKSLELARAQKQPEGSNQPPVLGGILAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIARHCSDVGS 2373
Range 2: 1717 to 1788 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
41.8 bits(85) | 0.0 | 17/24(71%) | 0/24(0%) | Minus/Plus |
Query 808 LGMTVLCL**L**F*QPPYMYYLF 879 + + +LCL**L**+*+PPYMYYLF Subject 1717 VSLRILCL**L**Y*RPPYMYYLF 1788
Range 3: 2022 to 2375 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
255.4 bits(551) | 0.0 | 109/118(92%) | 0/118(0%) | Plus/Minus |
Query 221 KLPTTEQWRAISIATLN*SLSDMPDSPNARINSSIAPSSMTFGDSTTDSCFNTSRMSTVFERAFSITLFLLARTPPRVGGWLEPVGCF*ALASSKDFSLASKASFDSPGNFPGGLAI* 574 +LPT+EQWRAISIATLN*SLSDMPDSPNARINSSIAPSS+T GDSTTDSCFNTSRMSTVFERAFS+TLFLLAR PPR GGWLEP GCF*ALASSKDFSLASKASFDSPGN PGGLAI* Subject 2022 ELPTSEQWRAISIATLN*SLSDMPDSPNARINSSIAPSSITLGDSTTDSCFNTSRMSTVFERAFSMTLFLLARMPPRTGGWLEPSGCF*ALASSKDFSLASKASFDSPGNLPGGLAI* 2375
Range 4: 1836 to 1991 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
114.7 bits(244) | 0.0 | 49/52(94%) | 0/52(0%) | Plus/Minus |
Query 605 PIWLTPKAFKPPNTSLTVEASASLGPQFSINIDSPVALMRQP**SPSLLSTC 760 PIWLTPKAFKPPNTSL VEASASLGPQFSINIDSPVALMRQP* SP LLSTC Subject 1836 PIWLTPKAFKPPNTSLIVEASASLGPQFSINIDSPVALMRQP*LSPLLLSTC 1991
Range 5: 1724 to 1801 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
55.1 bits(114) | 0.0 | 23/26(88%) | 0/26(0%) | Plus/Minus |
Query 795 EPEFQTDSTYMEAVKTITIIKGTRQS 872 EPEFQTDSTYMEAV TITIIKGT+ S Subject 1724 EPEFQTDSTYMEAVNTITIIKGTKFS 1801
Range 6: 1720 to 2379 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
367.6 bits(796) | 0.0 | 180/220(82%) | 0/220(0%) | Plus/Minus |
Query 217 LQAANNRTMACNIYCNVKLITL*YARLTECSNQLIYCTFIHDIWR*HNRFMLQHLSHVHSF*KSILNNPLSFSKDTTKGXXXXXXXXXXXXPCQLQRFQSGLKSFI*LTRQLSWWARHLTMSTMIINFFTNMANP*SLQTP*HFLNC*SERLTWATIFN*Y*LPSGSYETTLMITIIAVYMCKD*GCNYNAY*NQNSKQIVHIWRXXXXXXXXXAQDSHS 876 L+A N R MACNIY NVKLI L*YARLTECSNQLIYCTFIH+I R*HNR +LQHL HVHSF*KSI N+PLSFSK+ TK RRLVRT RLLLS CQLQRFQSGLKSFI*LT Q SWWARH+TM TMIINFFTNMANP*SLQT HFLNC*S+RLTWATI N*Y*LP YETT++ITIIAV MCKD*GCN +AY NQNSKQIVHIWR L LLQLLKAQ+S + Subject 1720 LRATNVRAMACNIYRNVKLIAL*YARLTECSNQLIYCTFIHNIRR*HNRLVLQHLPHVHSF*KSIFNDPLSFSKNATKNRRLVRTFRLLLSSCQLQRFQSGLKSFI*LTWQPSWWARHMTMLTMIINFFTNMANP*SLQTSQHFLNC*SKRLTWATILN*Y*LPCSPYETTMIITIIAVDMCKD*GCNCSAYKNQNSKQIVHIWRPLILLQLLKAQNSQT 2379
Range 7: 1734 to 2369 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
344.3 bits(745) | 0.0 | 178/212(84%) | 0/212(0%) | Minus/Plus |
Query 227 VPLIIVIVLTASIYVLSVWNSGSSXXXXXXXXXXXXRQQ*W*SSRLSHKSHWGVNIN*KLWPK*GARFNS*GSVRGFEGFRG*PYW*RNXXXXXXXLDGEPTRKVAG*VK*SF*GQTEIFGAGKGSKAAYWF*PTSYPWWCPC*KKEGY*ECSFKNCGHARGVEA*ICCAISKCHG*RCNR*VDSSIR*VWHIRE*SI*RCNRYCTPLFCCW 862 VPLIIVIVLTASIYVLSVWNSGS RRCNCNPNPCTCRQQ*W* S LSHK + GVNIN*+LWPK*GA FN+*GSV FEGFRG*PYW*RN*LSLLTL GEPTRKVA *VK*SF*GQTEIFGAGK SKAA F*PTS WW C*KKEG+*+CSFKNCGHA GVEA +CCAIS C+G*RCNR*VDSSIR*VWHIRE S+*RC+RYCTPL W Subject 1734 VPLIIVIVLTASIYVLSVWNSGSCRRCNCNPNPCTCRQQ*W**SWLSHKGYRGVNIN*ELWPK*GACFNN*GSVGRFEGFRG*PYW*RN*LSLLTLSYGEPTRKVAR*VK*SF*GQTEIFGAGKSSKAA*RF*PTSCSWWHSC*KKEGH*KCSFKNCGHAGGVEARVCCAIS*CYG*RCNR*VDSSIR*VWHIRERSV*RCDRYCTPLL*RW 2369
Range 8: 1889 to 2248 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
229.7 bits(495) | 0.0 | 102/120(85%) | 0/120(0%) | Plus/Minus |
Query 348 EIAQQIHASTPLACPQFLKEHSQ*PSFF*QGHHQG*EVG*NQ*AAFEPLPAPKISVWPQKLHLTHPATFLVGSPSNNVNNDNQFLHQYG*PLKPSNPLTLP*LLKRAPHLGHNFQLILTP 707 EIAQQ ASTP ACPQFLKEH Q*PSFF*Q HQ EVG*N AAFE LPAPKISVWPQKLHLTH ATFLVGSP +NVNNDNQFLHQYG*PLKPSN TLP*LLK+APHLGHN QLILTP Subject 1889 EIAQQTRASTPPACPQFLKEHFQ*PSFF*QECHQEQEVG*NLQAAFELLPAPKISVWPQKLHLTHLATFLVGSPYDNVNNDNQFLHQYG*PLKPSNLPTLP*LLKQAPHLGHNSQLILTP 2248
Range 9: 2279 to 2374 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
61.1 bits(127) | 0.0 | 26/32(81%) | 0/32(0%) | Plus/Minus |
Query 222 SCQQQNNGVQYLLQR*IDHSLICQTHRMLEST 317 S Q+Q+NGVQYL QR* D SLICQTHRMLEST Subject 2279 SYQRQSNGVQYLSQR*TDRSLICQTHRMLEST 2374
Range 10: 1769 to 1984 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
120.2 bits(256) | 0.0 | 60/72(83%) | 0/72(0%) | Minus/Plus |
Query 612 HICTICLEFWF**AL*LQP*SLHM*TAMMVIIKVVS*EPLGSQY*LKIVAQVRRSLQQLRKC*GV*RL*GLA 827 HICTICLEFWF *AL LQP*SLHM TA+MVII VVS* GSQY*L+IVAQVRR LQQLRKC V*RL*GLA Subject 1769 HICTICLEFWFL*ALQLQP*SLHMSTAIMVIIMVVS*GLQGSQY*LRIVAQVRRLLQQLRKCWEV*RL*GLA 1984
Range 11: 2165 to 2332 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
111.0 bits(236) | 0.0 | 47/56(84%) | 0/56(0%) | Minus/Plus |
Query 264 KERGLLRMLFQKLWTCERC*SMNLLCYLQMSWMKVQ*MS*FEHSVSLAYQRVINLT 431 KERG L+MLFQKLWTC RC*S +LLCYL M WMKVQ*MS*FEHSVSLAYQR I+LT Subject 2165 KERGSLKMLFQKLWTCGRC*STSLLCYLLMLWMKVQ*MS*FEHSVSLAYQRAISLT 2332
Range 12: 2027 to 2104 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
66.6 bits(139) | 0.0 | 24/26(92%) | 0/26(0%) | Minus/Plus |
Query 492 WRAHQESCRVSQMKLLRPD*NLWSWQ 569 WRAHQE C+VSQMKLLRPD*NLWSWQ Subject 2027 WRAHQEGCQVSQMKLLRPD*NLWSWQ 2104
Range 13: 1680 to 1826 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
105.1 bits(223) | 0.0 | 41/49(84%) | 0/49(0%) | Plus/Plus |
Query 858 GTRQSFPNTGLYGQSQNIVPLIIVIVLTASIYVLSVWNSGSSRRCNCNP 1004 G +QSFP++GL+GQS+N VPLIIVIVLTASIYVLSVWNSGS RRCNCNP Subject 1680 GPKQSFPSSGLFGQSENFVPLIIVIVLTASIYVLSVWNSGSCRRCNCNP 1826
Range 14: 1685 to 1828 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
96.8 bits(205) | 0.0 | 38/48(79%) | 0/48(0%) | Plus/Plus |
Query 863 KTVIPKHWALWSVSEHCASNNCNSFNSLHICTICLEFWF**AMQLQP* 1006 +TVIPK WA WSV E CA NNCNS N LHICTICLEFWF *A+QLQP* Subject 1685 QTVIPKLWAFWSV*EFCAFNNCNSINGLHICTICLEFWFL*ALQLQP* 1828
Range 15: 1658 to 1828 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
93.6 bits(198) | 0.0 | 40/57(70%) | 0/57(0%) | Minus/Minus |
Query 836 LGLQLHRLLEPEFQTDSTYMEAVKTITIIRGTMF*D*P*SPVFGNDCLVPLIIVIVL 1006 LGLQL RL EPEFQTDSTYMEAV TITII+GT F D*P SP GNDCL P +++++ Subject 1658 LGLQLQRLQEPEFQTDSTYMEAVNTITIIKGTKFSD*PKSPELGNDCLGPQYVMLLV 1828
Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome
Sequence ID: KX274275.1 Length: 8724 Number of Matches: 17
Range 1: 7581 to 8117 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
399.3 bits(865) | 0.0 | 170/179(95%) | 0/179(0%) | Minus/Plus |
Query 223 HVDSNDGDHQGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HC*MASPPGKLPGESNEAFEARLKSLELARAQKQPTGSNQPPTLGGVLAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIARHCSVVGS 759 HVDSN+GD+ GCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HC MASPPG+LPGESNEAFEARLKSLELARAQKQP GSNQPP LGG+LAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIARHCS VGS Subject 7581 HVDSNNGDNHGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HCHMASPPGRLPGESNEAFEARLKSLELARAQKQPEGSNQPPVLGGILAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIARHCSDVGS 8117
Range 2: 7461 to 7532 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
37.7 bits(76) | 0.0 | 16/24(67%) | 0/24(0%) | Minus/Plus |
Query 808 LGMTVLCL**L**F*QPPYMYYLF 879 + + +LCL**L**+*+ PYMYYLF Subject 7461 VSLRILCL**L**Y*RHPYMYYLF 7532
Range 3: 7766 to 8119 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
255.4 bits(551) | 0.0 | 109/118(92%) | 0/118(0%) | Plus/Minus |
Query 221 KLPTTEQWRAISIATLN*SLSDMPDSPNARINSSIAPSSMTFGDSTTDSCFNTSRMSTVFERAFSITLFLLARTPPRVGGWLEPVGCF*ALASSKDFSLASKASFDSPGNFPGGLAI* 574 +LPT+EQWRAISIATLN*SLSDMPDSPNARINSSIAPSS+T GDSTTDSCFNTSRMSTVFERAFS+TLFLLAR PPR GGWLEP GCF*ALASSKDFSLASKASFDSPGN PGGLAI* Subject 7766 ELPTSEQWRAISIATLN*SLSDMPDSPNARINSSIAPSSITLGDSTTDSCFNTSRMSTVFERAFSMTLFLLARMPPRTGGWLEPSGCF*ALASSKDFSLASKASFDSPGNLPGGLAI* 8119
Range 4: 7580 to 7735 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
115.2 bits(245) | 0.0 | 49/52(94%) | 0/52(0%) | Plus/Minus |
Query 605 PIWLTPKAFKPPNTSLTVEASASLGPQFSINIDSPVALMRQP**SPSLLSTC 760 PIWLTPKAFKPP+TSLTVEASASLGPQFSINIDSPVALMRQP* SP LLSTC Subject 7580 PIWLTPKAFKPPSTSLTVEASASLGPQFSINIDSPVALMRQP*LSPLLLSTC 7735
Range 5: 7468 to 7545 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.8 bits(111) | 0.0 | 22/26(85%) | 0/26(0%) | Plus/Minus |
Query 795 EPEFQTDSTYMEAVKTITIIKGTRQS 872 EPEFQTDSTYM+AV TITIIKGT+ S Subject 7468 EPEFQTDSTYMDAVNTITIIKGTKFS 7545
Range 6: 7464 to 8123 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
358.5 bits(776) | 0.0 | 176/220(80%) | 0/220(0%) | Plus/Minus |
Query 217 LQAANNRTMACNIYCNVKLITL*YARLTECSNQLIYCTFIHDIWR*HNRFMLQHLSHVHSF*KSILNNPLSFSKDTTKGXXXXXXXXXXXXPCQLQRFQSGLKSFI*LTRQLSWWARHLTMSTMIINFFTNMANP*SLQTP*HFLNC*SERLTWATIFN*Y*LPSGSYETTLMITIIAVYMCKD*GCNYNAY*NQNSKQIVHIWRXXXXXXXXXAQDSHS 876 L+A + R MACNIY NVKLI L*YARLTECSNQLIYCTFIH+I R*HNR +LQHL HVHSF*KSI N+PL F K+ TK RRLVRT RLLLS CQLQRFQSGLKSFI*LT Q SWWARH+TM TMIINFFTNMANP*SLQT HFLNC*S+RLTWATI N*Y*LP YETT++ITIIAV MCKD*GCN +AY NQNSKQIVHIW L LLQLLKAQ+S + Subject 7464 LRATDIRAMACNIYRNVKLIAL*YARLTECSNQLIYCTFIHNIRR*HNRLVLQHLPHVHSF*KSIFNDPLPFGKNATKNRRLVRTFRLLLSSCQLQRFQSGLKSFI*LTWQPSWWARHMTMLTMIINFFTNMANP*SLQTSQHFLNC*SKRLTWATILN*Y*LPCSPYETTMIITIIAVDMCKD*GCNCSAYKNQNSKQIVHIWMPLILLQLLKAQNSQT 8123
Range 7: 7478 to 8110 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
340.1 bits(736) | 0.0 | 176/211(83%) | 0/211(0%) | Minus/Plus |
Query 230 VPLIIVIVLTASIYVLSVWNSGSSXXXXXXXXXXXXRQQ*W*SSRLSHKSHWGVNIN*KLWPK*GARFNS*GSVRGFEGFRG*PYW*RNXXXXXXXLDGEPTRKVAG*VK*SF*GQTEIFGAGKGSKAAYWF*PTSYPWWCPC*KKEGY*ECSFKNCGHARGVEA*ICCAISKCHG*RCNR*VDSSIR*VWHIRE*SI*RCNRYCTPLFCC 862 VPLIIVIVLTASIYVLSVWNSGS RRCNCNPNPCTCRQQ*W* S LSHK + GVNIN*+LWPK*GA FNS*GS FEGFRG*PYW*RN*LSLLTL GEPTRKVA *VK*SF*GQTEIFGAGK SKAA F*PTS WW C K+EG+*+CSFKNCGHA GVEA +CCAIS C+G*RCNR*VDSSIR*VWHIRE S+*RC+RYCTPL C Subject 7478 VPLIIVIVLTASIYVLSVWNSGSCRRCNCNPNPCTCRQQ*W**SWLSHKGYRGVNIN*ELWPK*GACFNS*GSAGRFEGFRG*PYW*RN*LSLLTLSYGEPTRKVAR*VK*SF*GQTEIFGAGKSSKAA*RF*PTSCSWWHSCQKEEGH*KCSFKNCGHAGGVEARVCCAIS*CYG*RCNR*VDSSIR*VWHIRERSV*RCDRYCTPLL*C 8110
Range 8: 7633 to 7992 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
221.5 bits(477) | 0.0 | 99/120(82%) | 0/120(0%) | Plus/Minus |
Query 348 EIAQQIHASTPLACPQFLKEHSQ*PSFF*QGHHQG*EVG*NQ*AAFEPLPAPKISVWPQKLHLTHPATFLVGSPSNNVNNDNQFLHQYG*PLKPSNPLTLP*LLKRAPHLGHNFQLILTP 707 EIAQQ ASTP ACPQFLKEH Q*PS F Q HQ EVG*N AAFE LPAPKISVWPQKLHLTH ATFLVGSP +NVNNDNQFLHQYG*PLKPSN LP*LLK+APHLGHN QLILTP Subject 7633 EIAQQTRASTPPACPQFLKEHFQ*PSSFWQECHQEQEVG*NLQAAFELLPAPKISVWPQKLHLTHLATFLVGSPYDNVNNDNQFLHQYG*PLKPSNLPALP*LLKQAPHLGHNSQLILTP 7992
Range 9: 8023 to 8118 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
58.8 bits(122) | 0.0 | 25/32(78%) | 0/32(0%) | Plus/Minus |
Query 222 SCQQQNNGVQYLLQR*IDHSLICQTHRMLEST 317 S + Q+NGVQYL QR* D SLICQTHRMLEST Subject 8023 SYRHQSNGVQYLSQR*TDRSLICQTHRMLEST 8118
Range 10: 7513 to 7728 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
120.2 bits(256) | 0.0 | 60/72(83%) | 0/72(0%) | Minus/Plus |
Query 612 HICTICLEFWF**AL*LQP*SLHM*TAMMVIIKVVS*EPLGSQY*LKIVAQVRRSLQQLRKC*GV*RL*GLA 827 HICTICLEFWF *AL LQP*SLHM TA+MVII VVS* GSQY*L+IVAQVRR LQQLRKC V*RL*GLA Subject 7513 HICTICLEFWFL*ALQLQP*SLHMSTAIMVIIMVVS*GLQGSQY*LRIVAQVRRLLQQLRKCWEV*RL*GLA 7728
Range 11: 7909 to 8076 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
107.8 bits(229) | 0.0 | 46/56(82%) | 0/56(0%) | Minus/Plus |
Query 264 KERGLLRMLFQKLWTCERC*SMNLLCYLQMSWMKVQ*MS*FEHSVSLAYQRVINLT 431 K RG L+MLFQKLWTC RC*S +LLCYL M WMKVQ*MS*FEHSVSLAYQR I+LT Subject 7909 KGRGSLKMLFQKLWTCGRC*STSLLCYLLMLWMKVQ*MS*FEHSVSLAYQRAISLT 8076
Range 12: 7771 to 7848 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
66.6 bits(139) | 0.0 | 24/26(92%) | 0/26(0%) | Minus/Plus |
Query 492 WRAHQESCRVSQMKLLRPD*NLWSWQ 569 WRAHQE C+VSQMKLLRPD*NLWSWQ Subject 7771 WRAHQEGCQVSQMKLLRPD*NLWSWQ 7848
Range 13: 7424 to 7570 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
105.1 bits(223) | 0.0 | 41/49(84%) | 0/49(0%) | Plus/Plus |
Query 858 GTRQSFPNTGLYGQSQNIVPLIIVIVLTASIYVLSVWNSGSSRRCNCNP 1004 G +QSFP++GL+GQS+N VPLIIVIVLTASIYVLSVWNSGS RRCNCNP Subject 7424 GPKQSFPSSGLFGQSENFVPLIIVIVLTASIYVLSVWNSGSCRRCNCNP 7570
Range 14: 7429 to 7572 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
97.7 bits(207) | 0.0 | 38/48(79%) | 0/48(0%) | Plus/Plus |
Query 863 KTVIPKHWALWSVSEHCASNNCNSFNSLHICTICLEFWF**AMQLQP* 1006 +TVIPK WALWSV E CA NNCNS N +HICTICLEFWF *A+QLQP* Subject 7429 QTVIPKLWALWSV*EFCAFNNCNSINGIHICTICLEFWFL*ALQLQP* 7572
Range 15: 7402 to 7572 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
92.3 bits(195) | 0.0 | 39/57(68%) | 0/57(0%) | Minus/Minus |
Query 836 LGLQLHRLLEPEFQTDSTYMEAVKTITIIRGTMF*D*P*SPVFGNDCLVPLIIVIVL 1006 LGLQL RL EPEFQTDSTYM+AV TITII+GT F D*P SP GNDCL P +++++ Subject 7402 LGLQLQRLQEPEFQTDSTYMDAVNTITIIKGTKFSD*PKSPELGNDCLGPQYVMLLV 7572
Rupestris stem pitting associated virus strain Syrah, complete genome
Sequence ID: AY368590.1 Length: 8742 Number of Matches: 15
Range 1: 7581 to 8117 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
398.3 bits(863) | 0.0 | 171/179(96%) | 0/179(0%) | Minus/Plus |
Query 223 HVDSNDGDHQGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HC*MASPPGKLPGESNEAFEARLKSLELARAQKQPTGSNQPPTLGGVLAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIARHCSVVGS 759 HVDSN+GD +GCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HC*MASPPG+LPGESNEAFEARLKSLELARAQKQP GSNQPP LGGVLAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGES ISESDQFNVAIDIARHCS VGS Subject 7581 HVDSNNGDSKGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HC*MASPPGRLPGESNEAFEARLKSLELARAQKQPEGSNQPPALGGVLAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESDISESDQFNVAIDIARHCSDVGS 8117
Range 2: 7461 to 7532 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
36.3 bits(73) | 0.0 | 16/24(67%) | 0/24(0%) | Minus/Plus |
Query 808 LGMTVLCL**L**F*QPPYMYYLF 879 + + +L L**L**+*+PPYMYYLF Subject 7461 VSLRILHL**L**Y*RPPYMYYLF 7532
Range 3: 7464 to 8123 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
390.5 bits(846) | 0.0 | 187/220(85%) | 0/220(0%) | Plus/Minus |
Query 217 LQAANNRTMACNIYCNVKLITL*YARLTECSNQLIYCTFIHDIWR*HNRFMLQHLSHVHSF*KSILNNPLSFSKDTTKGXXXXXXXXXXXXPCQLQRFQSGLKSFI*LTRQLSWWARHLTMSTMIINFFTNMANP*SLQTP*HFLNC*SERLTWATIFN*Y*LPSGSYETTLMITIIAVYMCKD*GCNYNAY*NQNSKQIVHIWRXXXXXXXXXAQDSHS 876 L+A N R MACNIYCNVKLITL*Y RLTECSNQLIYCTFIHDIWR*HNRFMLQHL HVHS *KSI NNPL FSKDTTKGRRLVRT RLLLS CQLQRFQSG KSFI*LT Q SWWA HLTM TMIINFFTNMANP*SLQT *HFLNC*S+ LTWATIFN*Y*LP YETTL ITIIAV MCKD*GCNY+AY NQNSKQIVHIWR L L QLLK Q+S + Subject 7464 LRATNVRAMACNIYCNVKLITL*YVRLTECSNQLIYCTFIHDIWR*HNRFMLQHLPHVHSL*KSIFNNPLPFSKDTTKGRRLVRTFRLLLSSCQLQRFQSGFKSFI*LTWQPSWWACHLTMLTMIINFFTNMANP*SLQTS*HFLNC*SKCLTWATIFN*Y*LPCSPYETTLTITIIAVDMCKD*GCNYSAYKNQNSKQIVHIWRPLILSQLLKVQNSQT 8123
Range 4: 7766 to 8119 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
260.4 bits(562) | 0.0 | 112/118(95%) | 0/118(0%) | Plus/Minus |
Query 221 KLPTTEQWRAISIATLN*SLSDMPDSPNARINSSIAPSSMTFGDSTTDSCFNTSRMSTVFERAFSITLFLLARTPPRVGGWLEPVGCF*ALASSKDFSLASKASFDSPGNFPGGLAI* 574 +LPT+EQWRAISIATLN*SLSDM DSPNARINSSIAPSSMTFGDSTTDSCFNTSRMSTVFERAFSITLFLLARTPPR GGWLEP GCF*ALASSKDFSLASKASFDSPGN PGGLAI* Subject 7766 ELPTSEQWRAISIATLN*SLSDMSDSPNARINSSIAPSSMTFGDSTTDSCFNTSRMSTVFERAFSITLFLLARTPPRAGGWLEPSGCF*ALASSKDFSLASKASFDSPGNLPGGLAI* 8119
Range 5: 7580 to 7735 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
115.2 bits(245) | 0.0 | 49/52(94%) | 0/52(0%) | Plus/Minus |
Query 605 PIWLTPKAFKPPNTSLTVEASASLGPQFSINIDSPVALMRQP**SPSLLSTC 760 PIWLTPKAFKPPNTSLTVEASASLGPQFSINIDSPVALMRQP SP LLSTC Subject 7580 PIWLTPKAFKPPNTSLTVEASASLGPQFSINIDSPVALMRQPLLSPLLLSTC 7735
Range 6: 7468 to 7545 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.8 bits(109) | 0.0 | 22/26(85%) | 0/26(0%) | Plus/Minus |
Query 795 EPEFQTDSTYMEAVKTITIIKGTRQS 872 EPEFQTDSTYMEAV TITIIKG + S Subject 7468 EPEFQTDSTYMEAVNTITIIKGAKFS 7545
Range 7: 7481 to 8113 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
362.1 bits(784) | 0.0 | 186/211(88%) | 0/211(0%) | Minus/Plus |
Query 227 PLIIVIVLTASIYVLSVWNSGSSXXXXXXXXXXXXRQQ*W*SSRLSHKSHWGVNIN*KLWPK*GARFNS*GSVRGFEGFRG*PYW*RNXXXXXXXLDGEPTRKVAG*VK*SF*GQTEIFGAGKGSKAAYWF*PTSYPWWCPC*KKEGY*ECSFKNCGHARGVEA*ICCAISKCHG*RCNR*VDSSIR*VWHIRE*SI*RCNRYCTPLFCCW 859 PLIIVIVLTASIYVLSVWNSGS RRCNCNPNPCTCRQQ*W* LSHK + GVNIN*KLWPK*G FNS*GSVR FEGFRG*PYW*RN*LSLLTLLDG+PTRKVA *VK*SF* QTEIFGAGK SKAA F*PTS PWWCPC*K+EGY*+CSFK+CGHA GVEA*ICCAISKCHG*RCNR*VDSSIR*V HIRE*SI*RCNRYCTPL W Subject 7481 PLIIVIVLTASIYVLSVWNSGSCRRCNCNPNPCTCRQQ*W***GLSHKGYRGVNIN*KLWPK*GTCFNS*GSVRRFEGFRG*PYW*RN*LSLLTLLDGKPTRKVAR*VK*SF*SQTEIFGAGKSSKAA*RF*PTSCPWWCPC*KEEGY*KCSFKDCGHAGGVEA*ICCAISKCHG*RCNR*VDSSIR*V*HIRE*SI*RCNRYCTPLL*RW 8113
Range 8: 7633 to 8118 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
304.4 bits(658) | 0.0 | 145/162(90%) | 0/162(0%) | Plus/Minus |
Query 222 SCQQQNNGVQYLLQR*IDHSLICQTHRMLESTXXXXXXXXXXEIAQQIHASTPLACPQFLKEHSQ*PSFF*QGHHQG*EVG*NQ*AAFEPLPAPKISVWPQKLHLTHPATFLVGSPSNNVNNDNQFLHQYG*PLKPSNPLTLP*LLKRAPHLGHNFQLILTP 707 S Q+Q+NGVQYLLQR*IDHSLICQTHRMLESTHLLHLHP*HLEIAQQIHASTP ACPQ LKEH Q*PS F*QGHHQG EVG*N AAFE LPAPKISVW QKLHLTH ATFLVG PSNNVNNDNQFLHQYG*PLKPSN LTLP*LLK+ PHLGHNFQLILTP Subject 7633 SYQRQSNGVQYLLQR*IDHSLICQTHRMLESTHLLHLHP*HLEIAQQIHASTPPACPQSLKEHFQ*PSSF*QGHHQGQEVG*NLQAAFELLPAPKISVWLQKLHLTHLATFLVGLPSNNVNNDNQFLHQYG*PLKPSNLLTLP*LLKQVPHLGHNFQLILTP 8118
Range 9: 7513 to 7848 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
181.6 bits(390) | 0.0 | 96/112(86%) | 0/112(0%) | Minus/Plus |
Query 492 HICTICLEFWF**AL*LQP*SLHM*TAMMVIIKVVS*EPLGSQY*LKIVAQVRRSLQQLRKC*GV*RL*GLAXXXXXXXXXXXXVRWRAHQESCRVSQMKLLRPD*NLWSWQ 827 HICTICLEFWF *AL*LQP*SLHM TA+MVI++VVS* GSQY*LKIVAQVR LQQLRKC* V*RL*GLAILVKKLIIIV+IVRW+AHQE C+VSQMKLL+PD*NLWSWQ Subject 7513 HICTICLEFWFL*AL*LQP*SLHMSTAIMVIVRVVS*GLQGSQY*LKIVAQVRHLLQQLRKC*EV*RL*GLAILVKKLIIIVNIVRWQAHQEGCQVSQMKLLKPD*NLWSWQ 7848
Range 10: 7909 to 8076 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
122.5 bits(261) | 0.0 | 51/56(91%) | 0/56(0%) | Minus/Plus |
Query 264 KERGLLRMLFQKLWTCERC*SMNLLCYLQMSWMKVQ*MS*FEHSVSLAYQRVINLT 431 K RGLL+MLFQ+LWTC RC*SMNLLCYLQMSWMKVQ*MS*FEHSVSL YQRVINLT Subject 7909 KGRGLLKMLFQRLWTCGRC*SMNLLCYLQMSWMKVQ*MS*FEHSVSLTYQRVINLT 8076
Range 11: 7424 to 7570 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
104.6 bits(222) | 0.0 | 41/49(84%) | 0/49(0%) | Plus/Plus |
Query 858 GTRQSFPNTGLYGQSQNIVPLIIVIVLTASIYVLSVWNSGSSRRCNCNP 1004 G RQSFP++GL+GQS+N PLIIVIVLTASIYVLSVWNSGS RRCNCNP Subject 7424 GPRQSFPSSGLFGQSENFAPLIIVIVLTASIYVLSVWNSGSCRRCNCNP 7570
Range 12: 7402 to 7572 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
88.6 bits(187) | 0.0 | 38/57(67%) | 0/57(0%) | Minus/Minus |
Query 836 LGLQLHRLLEPEFQTDSTYMEAVKTITIIRGTMF*D*P*SPVFGNDCLVPLIIVIVL 1006 LGLQL RL EPEFQTDSTYMEAV TITII+G F D*P SP G DCL P +++++ Subject 7402 LGLQLQRLQEPEFQTDSTYMEAVNTITIIKGAKFSD*PKSPELGKDCLGPQYVMLLV 7572
Range 13: 7429 to 7572 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
86.8 bits(183) | 0.0 | 34/48(71%) | 0/48(0%) | Plus/Plus |
Query 863 KTVIPKHWALWSVSEHCASNNCNSFNSLHICTICLEFWF**AMQLQP* 1006 +TV PK WA WSV E C NNC+S N LHICTICLEFWF *A+ LQP* Subject 7429 QTVFPKLWAFWSV*EFCTFNNCDSINGLHICTICLEFWFL*AL*LQP* 7572
Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: Hiz6
Sequence ID: AB277786.1 Length: 2876 Number of Matches: 14
Range 1: 1837 to 2373 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
361.7 bits(783) | 0.0 | 158/179(88%) | 0/179(0%) | Minus/Plus |
Query 223 HVDSNDGDHQGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HC*MASPPGKLPGESNEAFEARLKSLELARAQKQPTGSNQPPTLGGVLAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIARHCSVVGS 759 HVDS+ G HQGC IRATGESILIENCGPSEALASTV+EVLGGLKALGVSH EEIDYHC* *MAS GKLPGESNEAFEARLK+LELARAQKQP GSN PPTLGG+LAKRKRVIENALSKTVDMREVLKHE+VV+SPNVMDEGAIDELIRAFGESGI+ES QF+VAIDIARHCS VGS Subject 1837 HVDSSSGTHQGCFIRATGESILIENCGPSEALASTVREVLGGLKALGVSHTIEEIDYHC*TG*MASQIGKLPGESNEAFEARLKALELARAQKQPEGSNTPPTLGGLLAKRKRVIENALSKTVDMREVLKHETVVISPNVMDEGAIDELIRAFGESGIAESAQFDVAIDIARHCSDVGS 2373
Range 2: 1734 to 1799 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
36.8 bits(74) | 0.0 | 15/22(68%) | 0/22(0%) | Minus/Plus |
Query 797 VPLIIVIVLTASIYVLSVWNSG 862 +PL++VI L A I+VLSVWNSG Subject 1734 LPLMLVIGLIAFIHVLSVWNSG 1799
Range 3: 2025 to 2375 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
181.1 bits(389) | 0.0 | 84/117(72%) | 0/117(0%) | Plus/Minus |
Query 221 KLPTTEQWRAISIATLN*SLSDMPDSPNARINSSIAPSSMTFGDSTTDSCFNTSRMSTVFERAFSITLFLLARTPPRVGGWLEPVGCF*ALASSKDFSLASKASFDSPGNFPGGLAI 571 +LPT+EQ RAIS+AT N +LS MPDSPNARI+SSIAPSS+TFG+ TT SCF+TS +STVFE AFSITL A PPRVGG LEP GCF*ALA+S FS AS AS DSPG+FP LAI Subject 2025 ELPTSEQ*RAISMATSNCALSAMPDSPNARISSSIAPSSITFGEITTVSCFSTSLISTVFESAFSITLLRFASKPPRVGGVLEPSGCF*ALANSSAFSRASNASLDSPGSFPI*LAI 2375
Range 4: 1839 to 1988 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
97.3 bits(206) | 0.0 | 41/50(82%) | 0/50(0%) | Plus/Minus |
Query 608 IWLTPKAFKPPNTSLTVEASASLGPQFSINIDSPVALMRQP**SPSLLST 757 +WLTPKAFKPPNTSLTV+A ASLGPQFSI IDSPVAL++QP * P LLST Subject 1839 VWLTPKAFKPPNTSLTVDARASLGPQFSIRIDSPVALIKQPW*VPLLLST 1988
Range 5: 1724 to 1798 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
34.1 bits(68) | 0.0 | 13/25(52%) | 0/25(0%) | Plus/Minus |
Query 798 PEFQTDSTYMEAVKTITIIKGTRQS 872 PEFQTD+T + A++ +T IKG + S Subject 1724 PEFQTDNTCINAIRPMTSIKGKKFS 1798
Range 6: 1771 to 2379 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
209.6 bits(451) | 0.0 | 105/203(52%) | 0/203(0%) | Plus/Minus |
Query 217 LQAANNRTMACNIYCNVKLITL*YARLTECSNQLIYCTFIHDIWR*HNRFMLQHLSHVHSF*KSILNNPLSFSKDTTKGXXXXXXXXXXXXPCQLQRFQSGLKSFI*LTRQLSWWARHLTMSTMIINFFTNMANP*SLQTP*HFLNC*SERLTWATIFN*Y*LPSGSYETTLMITIIAVYMCKD*GCNYNAY*NQNSKQIVHI 825 L A N R + CNIY ++KL L YARL++C+NQLIYCT IH+IW H+ FM HLSH+HS + I NN L+F K T+ V LLLS QLQRF G K FI L R+ S RH TMIINFF +MANP*SLQT H + TWA IFN * SG + TL+ AVYM KD NYN+ +QNSKQ +H+ Subject 1771 LGATNIRAVTCNIYGHIKLCALSYARLSKCANQLIYCTLIHNIWGNHHCFMF*HLSHIHSLRECIFNNSLTFCKQATESGWCVGAFWLLLSSSQLQRF*PGFKCFIRLAREFSNLTRHSACLTMIINFFDSMANP*SLQTSQHLSYSGCKGFTWAAIFNQD*FASGPDKATLVSATTAVYMSKDLDGNYNS*QDQNSKQTIHV 2379
Range 7: 1845 to 2369 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
140.4 bits(300) | 0.0 | 82/175(47%) | 0/175(0%) | Minus/Plus |
Query 227 QQ*W*SSRLSHKSHWGVNIN*KLWPK*GARFNS*GSVRGFEGFRG*PYW*RNXXXXXXXLDGEPTRKVAG*VK*SF*GQTEIFGAGKGSKAAYWF*PTSYPWWCPC*KKEGY*ECSFKNCGHARGVEA*ICCAISKCHG*RCNR*VDSSIR*VWHIRE*SI*RCNRYCTPLFCCW 751 QQ*W S RL ++ HW +N +*KL PK* + V FEGFRG*PY+ RN*LSLL L+GE K V *S * + G G S+AA T++ W C E Y*+C+ ++CG+ RG + * KC+G* CNR* DS I VWH E +I* +RYCT L CW Subject 1845 QQ*WHSPRLLYQGHWRINPD*KLRPK*SPCIHCKRGVGRFEGFRG*PYYRRN*LSLLNRLNGESNWKTPWRV**SI*SPAKSAGVG*SSEAARRLQHTTHSRWLACKT*ESY*KCTLEDCGYERGAKT*NSGDFPKCYG*GCNR*ADSRIWRVWHS*ERTI*CGHRYCTSLL*CW 2369
Range 8: 1769 to 2101 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
85.8 bits(181) | 0.0 | 58/111(52%) | 0/111(0%) | Minus/Plus |
Query 495 HICTICLEFWF**AL*LQP*SLHM*TAMMVIIKVVS*EPLGSQY*LKIVAQVRRSLQQLRKC*GV*RL*GLAXXXXXXXXXXXXVRWRAHQESCRVSQMKLLRPD*NLWSW 827 + C +CLEFW * L*L SL M*TA++ + KV PL +Q *LKI AQV+ +C V*RL*GLAIL KKLIIIV WR E+ S MK L+P * WSW Subject 1769 YTCIVCLEFWSC*EL*LPSKSLLM*TAVVALTKVALSGPLANQS*LKIAAQVKPLHPL*ERCWEV*RL*GLAILSKKLIIIVKQAEWRVKLENSLASLMKHLKPG*KRWSW 2101
Range 9: 2171 to 2329 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
56.5 bits(117) | 0.0 | 29/53(55%) | 0/53(0%) | Minus/Plus |
Query 267 RGLLRMLFQKLWTCERC*SMNLLCYLQMSWMKVQ*MS*FEHSVSLAYQRVINL 425 R LL+M ++LW ERC*+M + QM WM+VQ*MS*F H SLA R NL Subject 2171 RELLKMHSRRLWI*ERC*NMKQW*FPQMLWMRVQ*MS*FAHLESLA*LRAHNL 2329
Range 10: 1680 to 1826 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
81.7 bits(172) | 0.0 | 30/49(61%) | 0/49(0%) | Plus/Plus |
Query 858 GTRQSFPNTGLYGQSQNIVPLIIVIVLTASIYVLSVWNSGSSRRCNCNP 1004 G +QSFP++G++GQS+N +PL++VI L A I+VLSVWNSG R CNC+P Subject 1680 GPKQSFPSSGIFGQSENFLPLMLVIGLIAFIHVLSVWNSGLVRNCNCHP 1826
Range 11: 1961 to 2119 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
57.0 bits(118) | 0.0 | 28/53(53%) | 0/53(0%) | Plus/Minus |
Query 477 AAFEPLPAPKISVWPQKLHLTHPATFLVGSPSNNVNNDNQFLHQYG*PLKPSN 635 AA E P P + Q LH T F SP + NNDNQFL YG*PLKPSN Subject 1961 AASEL*PTPALLAGLQMLH*TRQGVFQFDSPFSLFNNDNQFLR*YG*PLKPSN 2119
Range 12: 2282 to 2374 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
30.4 bits(60) | 0.0 | 15/31(48%) | 0/31(0%) | Plus/Minus |
Query 222 SCQQQNNGVQYLLQR*IDHSLICQTHRMLES 314 S Q Q++ VQYL I S +CQT +M ES Subject 2282 SYQHQSSDVQYLWPHQIVRSQLCQTLQMRES 2374
Range 13: 1883 to 1924 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
24.0 bits(46) | 0.0 | 9/14(64%) | 0/14(0%) | Plus/Minus |
Query 672 HLGHNFQLILTPQW 713 HLG NFQ L QW Subject 1883 HLGRNFQSGLIRQW 1924
Range 14: 1664 to 1825 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
58.3 bits(121) | 0.0 | 25/54(46%) | 0/54(0%) | Minus/Minus |
Query 842 GLQLHRLLEPEFQTDSTYMEAVKTITIIRGTMF*D*P*SPVFGNDCLVPLIIVI 1003 G QL L PEFQTD+T + A++ +T I+G F D P P GNDCL P +++ Subject 1664 GWQLQFLTRPEFQTDNTCINAIRPMTSIKGKKFSDWPNIPELGNDCLGPQ*VIL 1825
Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: Hiz3
Sequence ID: AB277785.1 Length: 2876 Number of Matches: 15
Range 1: 1837 to 2373 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
358.9 bits(777) | 0.0 | 157/179(88%) | 0/179(0%) | Minus/Plus |
Query 223 HVDSNDGDHQGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HC*MASPPGKLPGESNEAFEARLKSLELARAQKQPTGSNQPPTLGGVLAKRKRVIENALSKTVDMREVLKHESVVLSPNVMDEGAIDELIRAFGESGISESDQFNVAIDIARHCSVVGS 759 HVDS+ G+HQGC IRATGESILIENCGPSEALASTVKEVLGGLKALGVS EEIDYHC* *MAS GKLPGESNEAFEARLKSLELARAQKQP GSN PPTL G+LAKRKR+IENALSKTVDMREVLKHE+VV+SPNVMDEGAIDELIRAFGESGI+ES QF+VAIDIARHCS VGS Subject 1837 HVDSSSGNHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVSRAVEEIDYHC*IG*MASQIGKLPGESNEAFEARLKSLELARAQKQPEGSNAPPTLSGILAKRKRIIENALSKTVDMREVLKHETVVISPNVMDEGAIDELIRAFGESGIAESVQFDVAIDIARHCSDVGS 2373
Range 2: 1723 to 1788 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
22.6 bits(43) | 0.0 | 12/22(55%) | 0/22(0%) | Minus/Plus |
Query 808 MTVLCL**L**F*QPPYMYYLF 873 + +LCL* L * * YMY LF Subject 1723 LRILCL*CLS*V*SHSYMYCLF 1788
Range 3: 2025 to 2375 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
191.7 bits(412) | 0.0 | 90/117(77%) | 0/117(0%) | Plus/Minus |
Query 221 KLPTTEQWRAISIATLN*SLSDMPDSPNARINSSIAPSSMTFGDSTTDSCFNTSRMSTVFERAFSITLFLLARTPPRVGGWLEPVGCF*ALASSKDFSLASKASFDSPGNFPGGLAI 571 +LPT+EQ RAISIAT N +LS MPDSPNARI+SSIAPSSMTFG+ TT SCF TS MSTVFE AFSI L LAR P RVGG LEP GCF*ALA+S DFS ASKASFDSPG+FP LAI Subject 2025 ELPTSEQ*RAISIATSNCTLSAMPDSPNARISSSIAPSSMTFGEITTVSCFKTSLMSTVFESAFSIILLRLARMPLRVGGALEPSGCF*ALANSSDFSRASKASFDSPGSFPI*LAI 2375
Range 4: 1839 to 1982 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
88.6 bits(187) | 0.0 | 39/48(81%) | 0/48(0%) | Plus/Minus |
Query 614 LTPKAFKPPNTSLTVEASASLGPQFSINIDSPVALMRQP**SPSLLST 757 LTPKAFKPP+TS TV+A ASLGPQFSI IDSPVALM+QP * P LLST Subject 1839 LTPKAFKPPSTSFTVDARASLGPQFSIKIDSPVALMKQPW*LPLLLST 1982
Range 5: 1724 to 1798 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
38.6 bits(78) | 0.0 | 15/25(60%) | 0/25(0%) | Plus/Minus |
Query 798 PEFQTDSTYMEAVKTITIIKGTRQS 872 PEFQTD+T M A++ +T IKGT+ S Subject 1724 PEFQTDNTCMNAIRPMTSIKGTKFS 1798
Range 6: 1771 to 2097 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
114.7 bits(244) | 0.0 | 57/109(52%) | 0/109(0%) | Plus/Minus |
Query 499 LQRFQSGLKSFI*LTRQLSWWARHLTMSTMIINFFTNMANP*SLQTP*HFLNC*SERLTWATIFN*Y*LPSGSYETTLMITIIAVYMCKD*GCNYNAY*NQNSKQIVHI 825 LQRF G KS I* T + H TMIINFF + ANP*SLQT H L+ + LTWA + N *L SG E TL+I AVYM KD NYN+Y +QNSKQ +H+ Subject 1771 LQRF*PGFKSLI*FTGEFPNLTCHSANLTMIINFFNSTANP*SLQTSQHLLHSGCKGLTWAAVLNQN*LSSGPNEATLVIATTAVYMSKDLDGNYNSYQDQNSKQTIHV 2097
Range 7: 2146 to 2379 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
112.0 bits(238) | 0.0 | 44/78(56%) | 0/78(0%) | Plus/Minus |
Query 217 LQAANNRTMACNIYCNVKLITL*YARLTECSNQLIYCTFIHDIWR*HNRFMLQHLSHVHSF*KSILNNPLSFSKDTTK 450 L A N R + C IY ++KL YAR T+C+NQL+YCTFIHDIW H+RF+ Q+L HVH *K IL NPL+F K+ T+ Subject 2146 LGATNIRAVTCYIYSHIKLHAFSYARFTKCTNQLVYCTFIHDIWGNHHRFVFQNLPHVHRL*KCILYNPLAFGKNATE 2379
Range 8: 1734 to 2225 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
135.3 bits(289) | 0.0 | 90/164(55%) | 0/164(0%) | Minus/Plus |
Query 371 VPLIIVIVLTASIYVLSVWNSGSSXXXXXXXXXXXXRQQ*W*SSRLSHKSHWGVNIN*KLWPK*GARFNS*GSVRGFEGFRG*PYW*RNXXXXXXXLDGEPTRKVAG*VK*SF*GQTEIFGAGKGSKAAYWF*PTSYPWWCPC*KKEGY*ECSFKNCGHARGVE 862 VPL++VI L A I+VLSVWNSG R CNC+PNPC+CRQQ*W S RL H HW VN +*+L PK*G + G FEGFRG*P *RN*LSLL L+G+ + *+K* F* +I G SKAA F* T+Y W C +E Y EC+FK+ GH G E Subject 1734 VPLMLVIGLIAFIHVLSVWNSGLGRNCNCHPNPCSCRQQ*WQSPRLLH*GHWRVNFD*ELRPK*GPCIHCEGGAGRFEGFRG*PCC*RN*LSLLNWLNGKSNWETPR*IK*GF*SPAKIAGVS*SSKAAGRF*CTTYSQWHSCQTQEDYRECTFKDGGHEGGFE 2225
Range 9: 2250 to 2369 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.9 bits(107) | 0.0 | 23/40(57%) | 0/40(0%) | Minus/Plus |
Query 227 KCHG*RCNR*VDSSIR*VWHIRE*SI*RCNRYCTPLFCCW 346 KCHG*RCNR DS I *+WH + +I* RY T L CW Subject 2250 KCHG*RCNRRADSCIW*IWHS*KRAI*CGYRYSTSLL*CW 2369
Range 10: 1769 to 2098 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
93.2 bits(197) | 0.0 | 60/110(55%) | 0/110(0%) | Minus/Plus |
Query 498 HICTICLEFWF**AL*LQP*SLHM*TAMMVIIKVVS*EPLGSQY*LKIVAQVRRSLQQLRKC*GV*RL*GLAXXXXXXXXXXXXVRWRAHQESCRVSQMKLLRPD*NLWS 827 H C +CLEFW * L*L SL M*TA++ I KV S PL SQ+*L+ AQVR R+C V*RL*GLA+L+KKLIIIV + W+ + V+QM+LL+P *N WS Subject 1769 HTCIVCLEFWSW*EL*LPSKSLLM*TAVVAITKVASLGPLESQF*LRTAAQVRPLHPL*RRCWEV*RL*GLAVLLKKLIIIVKLAEWQVKLGNSPVNQMRLLKPG*NRWS 2098
Range 11: 2171 to 2329 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
54.2 bits(112) | 0.0 | 29/53(55%) | 0/53(0%) | Minus/Plus |
Query 267 RGLLRMLFQKLWTCERC*SMNLLCYLQMSWMKVQ*MS*FEHSVSLAYQRVINL 425 RGL RM FQ+ WT R *+ + QMSWMKVQ* S*F H V+LA + NL Subject 2171 RGL*RMHFQRRWT*GRF*NTKRW*FPQMSWMKVQ*TS*FVHLVNLA*LKACNL 2329
Range 12: 1883 to 2224 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
91.8 bits(194) | 0.0 | 54/114(47%) | 0/114(0%) | Plus/Minus |
Query 372 STPLACPQFLKEHSQ*PSFF*QGHHQG*EVG*NQ*AAFEPLPAPKISVWPQKLHLTHPATFLVGSPSNNVNNDNQFLHQYG*PLKPSNPLTLP*LLKRAPHLGHNFQLILTPQW 713 S P +CP LK HS * S Q H * V *N AAFE P I QK HL H P + NNDNQFL Q+G*PLKPSN P + PHLG + Q LT QW Subject 1883 SKPPSCPPSLKVHSL*SSCVWQECH*E*VVH*NLPAAFEL*LTPAILAGLQKPHLIHRGVSQFDLPFSQFNNDNQFLQQHG*PLKPSNLPAPPSQWMQGPHLGRSSQSKLTLQW 2224
Range 13: 2282 to 2422 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
27.6 bits(54) | 0.0 | 15/47(32%) | 0/47(0%) | Plus/Minus |
Query 174 CKNSQLESNSHASNPPSCQQQNNGVQYLLQR*IDHSLICQTHRMLES 314 C +++S S Q Q++ V YL I +CQ H+M ES Subject 2282 CLGHKMDSCLSGLTSGSYQHQSSDVLYL*PHQIARFQLCQIHQMHES 2422
Range 14: 1680 to 1826 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
84.0 bits(177) | 0.0 | 31/49(63%) | 0/49(0%) | Plus/Plus |
Query 858 GTRQSFPNTGLYGQSQNIVPLIIVIVLTASIYVLSVWNSGSSRRCNCNP 1004 G +QSFP++G++GQS+N VPL++VI L A I+VLSVWNSG R CNC+P Subject 1680 GPKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSGLGRNCNCHP 1826
Range 15: 1664 to 1825 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
57.4 bits(119) | 0.0 | 25/54(46%) | 0/54(0%) | Minus/Minus |
Query 842 GLQLHRLLEPEFQTDSTYMEAVKTITIIRGTMF*D*P*SPVFGNDCLVPLIIVI 1003 G QL L PEFQTD+T M A++ +T I+GT F D P P G DC P +++ Subject 1664 GWQLQFLPRPEFQTDNTCMNAIRPMTSIKGTKFSDWPNIPELGKDCFGPQ*VIL 1825
Nucleotide Sequence (1752 letters)
Query ID: | ds2016-133_14 |
Query definition: | No definition line |
Query length: | 603 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
1286.8 | 6879.7 | 34% | 0 | 81% | AY368590.1 | |
1259.8 | 6424.4 | 33% | 0 | 80% | KX274275.1 | |
1272.6 | 6427.9 | 36% | 0 | 80% | AB277783.1 | |
1067.3 | 4165.7 | 26% | 0 | 47% | AF026278.1 | |
1060.9 | 4075.3 | 34% | 0 | 46% | JQ922417.1 |
Alignments
Rupestris stem pitting associated virus strain Syrah, complete genome
Sequence ID: AY368590.1 Length: 8742 Number of Matches: 16
Range 1: 6040 to 7713 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1286.8 bits(2802) | 0.0 | 536/558(96%) | 0/558(0%) | Minus/Plus |
Query 74 LGSFAIMRFTGEASTFLFNTMANMLFTFLRYELTGSESIAFAGDDMCANSRLRLKTEHEGFLNMICLKAKVQFVTNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFTAFTAGVPDTPNLSGRYIKPYSPGCAVKGRINILDEYLSVDDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNVRSDGLDEVITGSPFELDVEGVLICFGKEAVDLAVAHDSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCKLGQNCHSVDDRLGHWLGAAFPKKVKFAILRGQHTSISTWRTL*GRHQKHNILWSQTVFPELWAFWSV*EFCTFNNCDSINGLHICTICLEFWFL*AL*LQP*SLHMSTAIMVIVRVVS*GLQGSQY*LKIVAQVRHLLQQLRKC*EV*R 1747 LGSFAIMRFTGEASTFLFNTMANMLFTFLRYELTGSESIAFAGDDMCANSRLRLKTEHEGFLNMICLKAKVQFVTNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWH IIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESF AFTAGVPDTPNLSGRYIKPYSPGCAVKG+INILDEYLSV+D S FDVLFSDPYQNISVPREAHFIKSKTCRFG+NTCKYLLSFGF+V SD DEVITGSPFELDVEGVLICFGKEAV+LA AH+SDFKLPCEVRG TFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*+AFSATC+LGQNC+S+DDRLGHWLGAAFPKKVKFA+LRGQHTSISTWRTL*GRHQKHNILWSQTVFP+LWAFWSV*EFCTFNNCDSINGLHICTICLEFWFL*AL*LQP*SLHMSTAIMVIVRVVS*GLQGSQY*LKIVAQVRHLLQQLRKC*EV*R Subject 6040 LGSFAIMRFTGEASTFLFNTMANMLFTFLRYELTGSESIAFAGDDMCANSRLRLKTEHEGFLNMICLKAKVQFVTNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHY*IIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVNDFSDFDVLFSDPYQNISVPREAHFIKSKTCRFGKNTCKYLLSFGFDVHSDRSDEVITGSPFELDVEGVLICFGKEAVNLAAAHNSDFKLPCEVRGTTFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*DAFSATCELGQNCYSIDDRLGHWLGAAFPKKVKFAVLRGQHTSISTWRTL*GRHQKHNILWSQTVFPKLWAFWSV*EFCTFNNCDSINGLHICTICLEFWFL*AL*LQP*SLHMSTAIMVIVRVVS*GLQGSQY*LKIVAQVRHLLQQLRKC*EV*R 7713
Range 2: 6040 to 7779 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1197.5 bits(2607) | 0.0 | 529/580(91%) | 0/580(0%) | Plus/Minus |
Query 8 GSPSNNVNNDNQFLHQYG*PLKPSNLLTLP*LLKQVPHLGHNFQLILTPL*PL*DNPYYHHYCCRHVXXXXXXXXXXXEPEFQTDSTYMEAVNTITIIKGAKFSD*PKSPELGKDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDYQLLSMSCCSNVEPVLIIRGRIS*FQ*GDNIKCGTSYLTRKFEVGIVRNRQINCLLAKTN*DALHI*LKR*TSNHFIKPITTHIKTKG*KVLACILTKSAGLGLYEVSLPRNTDILIWVRE*HVKTGNVINRQILIKYVYPPFYSTTRRVWLDVPPRKIGSVGNSGCEGCETLVLSDELSYQTTFTATRNTMNDNWKSEHTIDTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQSRN*ASHLVLISNQEPHTVVVRXXXXXXXXXXXQLTQPVGIGHLNCIIINAIFQVTHFTSNANSLPNQLRFLKDPFFEQTPSTKCRVCDELYFSLKANHIQETFMLSFKP*SAVCAHIIARKRN*LGPCQFVP*EGKQHICHCVEQKGTGFTRKSHYGKRPK 1747 G PSNNVNNDNQFLHQYG*PLKPSNLLTLP*LLKQVPHLGHNFQLILTPL*PL*DNPYYHHYCCRHVQGLGLQLQRLQEPEFQTDSTYMEAVNTITIIKGAKFSD*PKSPELGKDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHD QLL MSCCSNVEPVLIIRGRIS*FQ*G+NIKC TSYLTRKFE+ I+R+ Q+NCLLAK N* L+I LK *T NHFI+P+T HIKTKG*KVL CI K AGL LYEVSLP NTDILIWVRE*HVK VI+RQILI+YVY PFYSTTRRVWLDVPPRK+ SVGN+G E ETLV S+ELSYQTTFT TRN MN+NWKSEH I+THKLKRRQSFN*VIHNN MPNT*GLIYSFKQSRN*ASHLVLISNQEPHTVVVRFNF FIHHFN*QL QPVGIGHLNCIIINAIFQV HFTSNANSLPNQLRFLKDPFFEQTPSTKCRVCDELYFSLKANHIQETFMLSFKP*SAVCAHIIARKRN*LGPCQFVP*EGKQHICHCVEQKGTGFTRKSHYGKRPK Subject 6040 GLPSNNVNNDNQFLHQYG*PLKPSNLLTLP*LLKQVPHLGHNFQLILTPL*PL*DNPYYHHYCCRHVQGLGLQLQRLQEPEFQTDSTYMEAVNTITIIKGAKFSD*PKSPELGKDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDDQLLPMSCCSNVEPVLIIRGRIS*FQ*GNNIKCSTSYLTRKFEI*IMRSCQVNCLLAKAN*HTLNIQLKW*TCNHFIRPVTMHIKTKG*KVLTCIFAKPAGL*LYEVSLPWNTDILIWVRE*HVKIRKVIHRQILIEYVYLPFYSTTRRVWLDVPPRKVWSVGNAGRESYETLVFSNELSYQTTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNLIMPNT*GLIYSFKQSRN*ASHLVLISNQEPHTVVVRFNFLFIHHFN*QLAQPVGIGHLNCIIINAIFQVAHFTSNANSLPNQLRFLKDPFFEQTPSTKCRVCDELYFSLKANHIQETFMLSFKP*SAVCAHIIARKRN*LGPCQFVP*EGKQHICHCVEQKGTGFTRKSHYGKRPK 7779
Range 3: 6684 to 7778 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
792.9 bits(1724) | 0.0 | 339/365(93%) | 0/365(0%) | Plus/Minus |
Query 9 ARHLTMLTMTINFFTNMANP*SLQTS*HFLNC*SKCLTWATIFN*Y*LPCSPYETTLTITIIAVDMCKD*GCNYSAYKNQNSKQIVHIWRPLILSQLLKVQNSQTDQKAQSSGKTVWDHNMLCFWCRPYNVLHVEIDVCCPLSMANLTFLGNAAPSQCPSLSSTE*QFWPNLQVAEKAFHCMIINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSESCATAKSTASLPKQIRTPSTSNSNGEPVITSSSPSLRTLKPKDRRYLHVFSPNLQVLDFMK*ASLGTLIF*YGSENSTSKPEMSSTDRYSSSMFILPFTAQPGEYGLMYLPERLGVSGTPAVKAVKLSSSVMSSLIK 1103 A HLTMLTM INFFTNMANP*SLQTS*HFLNC*SKCLTWATIFN*Y*LPCSPYETTLTITIIAVDMCKD*GCNYSAYKNQNSKQIVHIWRPLILSQLLKVQNSQTDQKAQS GKTVWDHNMLCFWCRPYNVLHVEIDVCCPLS ANLTFLGNAAPSQCPSLSS E*QFWPN QVAEKA HCM+INFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNV PRTSQGSLKSE CA AK TASLPKQI TPSTSNSNGEPVITSS SL T KPKDRRYLHVF PNLQV DFMK*ASLGTLIF*YGSEN+TSK E S TDRYSSSMFI PFTAQPGEYGLMYLPER GVSGTPAVKA+KLSSSVMSSLIK Subject 6684 ACHLTMLTMIINFFTNMANP*SLQTS*HFLNC*SKCLTWATIFN*Y*LPCSPYETTLTITIIAVDMCKD*GCNYSAYKNQNSKQIVHIWRPLILSQLLKVQNSQTDQKAQSLGKTVWDHNMLCFWCRPYNVLHVEIDVCCPLSTANLTFLGNAAPSQCPSLSSME*QFWPNSQVAEKASHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVVPRTSQGSLKSELCAAAKLTASLPKQISTPSTSNSNGEPVITSSDLSLCTSKPKDRRYLHVFLPNLQVFDFMK*ASLGTLIF*YGSENNTSKSEKSFTDRYSSSMFIFPFTAQPGEYGLMYLPERFGVSGTPAVKAMKLSSSVMSSLIK 7778
Range 4: 6692 to 7786 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
681.0 bits(1480) | 0.0 | 325/365(89%) | 0/365(0%) | Minus/Plus |
Query 1 ESSSLRTRVSQPSQPEFPTLPIFLGGTSSHTLLVVL*KGG*TYLMSICLLMTFPVLTCYSLTHIKISVFRGRLTS*SPRPADLVRIHASTFYPLVLMCVVMGLMK*LLVHRLS*MWRAS*FVLARRQLIWRLRTIPTSNFLVRYEVPHLMLSPY*NQEIRPLMISTGSTLLQQDIERS**SCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPRQSFPSSGLFGQSENFAPLIIVIVLTASIYVLSVWNSGSXXXXXXXXXXXXXRQQ*W***GLSHKGYRGVNIN*KLWPK*GTCFNS*GSVRRFEGFRG*PYW*RNXXXXXXXLDGEPLK 1095 ESS L+TRVS S+P FPTL FLGGTSSHTLLVVL*KG *TY MSICL MTF +LTCYSLTHIKISVF+GRLTS*S RPA L +IH STFYPLVLMC+V GLMK*L VH LS M R *F LARRQL W+LR I SNFLVRYEV HLML PY*NQEIRPLMISTGSTLLQQDI RS* SCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPRQSFPSSGLFGQSENFAPLIIVIVLTASIYVLSVWNSGSCRRCNCNPNPCTCRQQ*W***GLSHKGYRGVNIN*KLWPK*GTCFNS*GSVRRFEGFRG*PYW*RN*LSLLTLLDG+P + Subject 6692 ESSLLKTRVS*LSRPAFPTLQTFLGGTSSHTLLVVL*KGR*TYSMSICL*MTFLILTCYSLTHIKISVFQGRLTS*SQRPAGLAKIHVSTFYPLVLMCIVTGLMK*LQVHHLSWMLRVC*FALARRQLTWQLRIIQISNFLVRYEVLHLMLLPY*NQEIRPLMISTGSTLLQQDIGRS*SSCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPRQSFPSSGLFGQSENFAPLIIVIVLTASIYVLSVWNSGSCRRCNCNPNPCTCRQQ*W***GLSHKGYRGVNIN*KLWPK*GTCFNS*GSVRRFEGFRG*PYW*RN*LSLLTLLDGKPTR 7786
Range 5: 6039 to 6605 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
413.9 bits(897) | 0.0 | 187/189(99%) | 0/189(0%) | Plus/Minus |
Query 1182 VDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSMQFSRLPISRAMQILSQIN*GFLKIPSLNKHHPQNVGFVTNCTLALRQIIFRKPSCSVLSLNLLFAHISSPANAIDSDPVSSYLKKVNNIFAIVLNKKVLASPVNLIMAKDPS 1748 VDKALTKLFIII CQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSMQFSRLPISRAMQILSQIN*GFLKIPSLNKHHPQNVGFVTNCTLALRQIIFRKPSCSVLSLNLLFAHISSPANAIDSDPVSSYLKKVNNIFAIVLNKKVLASPVNLIMAKDPS Subject 6039 VDKALTKLFIII**CQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSMQFSRLPISRAMQILSQIN*GFLKIPSLNKHHPQNVGFVTNCTLALRQIIFRKPSCSVLSLNLLFAHISSPANAIDSDPVSSYLKKVNNIFAIVLNKKVLASPVNLIMAKDPS 6605
Range 6: 6068 to 6430 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
282.9 bits(611) | 0.0 | 118/121(98%) | 0/121(0%) | Minus/Plus |
Query 1357 RVKPVPFCSTQWQICCLPS*GTN*QGPSQLRLRAMICAQTAD*GLKLSMKVS*I*FALRLKYNSSQTLHFVDGVCSKKGSLRNLN*FGREFALLVKWVTWKIALIIMQLRCPMPTGWVSCQ 1719 RVKPVPFCSTQWQICCLPS*GTN*QGPSQLRLRAMICAQTAD*GLKLSMKVS*I*FALRLKYNSSQTLHFVDGVCSKKGSLRNL+*FGREFALLVKW TWKIALIIMQLRCPMPTGW SCQ Subject 6068 RVKPVPFCSTQWQICCLPS*GTN*QGPSQLRLRAMICAQTAD*GLKLSMKVS*I*FALRLKYNSSQTLHFVDGVCSKKGSLRNLS*FGREFALLVKWATWKIALIIMQLRCPMPTGWASCQ 6430
Range 7: 6438 to 6641 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
136.7 bits(292) | 0.0 | 64/68(94%) | 0/68(0%) | Minus/Plus |
Query 1146 DE*RRS*SALQLCAVPG*K*AQDEMLNFWIV*SYRLGLKCLAWCDYYE*LS*SFVYV*VCGCL*CAQI 1349 DE*R S*SALQLCAVPG*K*AQDEMLNFWIV*SYRLGLKCLA DYYE*LS*SFVYV*VCGCL* AQI Subject 6438 DE*RGS*SALQLCAVPG*K*AQDEMLNFWIV*SYRLGLKCLALLDYYE*LS*SFVYV*VCGCL*RAQI 6641
Range 8: 6161 to 7480 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
850.6 bits(1850) | 0.0 | 386/440(88%) | 0/440(0%) | Plus/Minus |
Query 307 CKILRLTKKPRARERLSGTTICYAFGAVPITSSMWKLMYVVP*VWQI*LS*EMQHQANAQAYRQRSDSFGPICRLLKRHFTA*LSTSFYVLLQQCRTSAYHQRSDLLISIR*QHQMWHLVPHKEV*SRNRAQPPNQLPPCQNKLGRPPHLTQTVNQ*SLHQAHHYAH*NQRIEGTCMYSHQICRSWTL*SEPPSEH*YFDMGQRIARQNRKCHQQTDTHQVCLSSLLQHNQESMA*CTSQKDWECXXXXXXXXXNSRPQ**ALLSNYFYRYQEHYERQLEI*AHYRHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQLLLHSSFQLTTHPTCRHRTPQLHNYQCNFPGYPFHEQCKFSPKSIEVS*RSLL*TNTIHKM*GL*RIVL*P*GKSYSGNLHAQF*ALICCLRTYHRPQ 1626 CKILRLTKKPRA ERLSGTTICYAFGAVPITSSMWKLMYVVP*V QI*LS*EMQHQANAQAYRQ S+SFGPI RLLKRH TA* STS YVLLQQCRTSAYHQRSDLLISIR*QHQM +LVPHKEV*+ N AQ P+ LPPCQ+KL P H TQ VN *SLHQ HYAH NQRIEGT MY Q CRS TL*SEPP EH*YFDMGQRI RQN+K H QTDTH+VCLSSLLQHNQESMA*CTSQK ECRE R *+L*NSR Q**ALLSNYFY YQE YE+QLEI*A Y+HPQTQT*TKL*LSYS**S++AKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQL LHSSFQLTT PTCRHRTPQLHNYQCNFPG PFHEQCKFSPKS EVS*RSLL*TNTIHKM*GL*RIVL*P*GKSYSGNLHAQF*ALICCLRTYHRPQ Subject 6161 CKILRLTKKPRAWERLSGTTICYAFGAVPITSSMWKLMYVVP*VRQI*LS*EMQHQANAQAYRQWSNSFGPIRRLLKRHLTA**STSSYVLLQQCRTSAYHQRSDLLISIR*QHQM*YLVPHKEV*NLNYAQLPS*LPPCQSKLAHPQHPTQMVNL*SLHQTCHYAHQNQRIEGTYMYFCQTCRSLTL*SEPPLEH*YFDMGQRITRQNQKSHSQTDTHRVCLSSLLQHNQESMA*CTSQKGLECRERRP*KL*NSRLQ**ALLSNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SNNAKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQLPLHSSFQLTTRPTCRHRTPQLHNYQCNFPGCPFHEQCKFSPKSTEVS*RSLL*TNTIHKM*GL*RIVL*P*GKSYSGNLHAQF*ALICCLRTYHRPQ 7480
Range 9: 7532 to 7735 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
137.2 bits(293) | 0.0 | 68/68(100%) | 0/68(0%) | Plus/Minus |
Query 52 PIWLTPKAFKPPNTSLTVEASASLGPQFSINIDSPVALMRQXXXXXXXXXTCARIRVAITAPTRTRIP 255 PIWLTPKAFKPPNTSLTVEASASLGPQFSINIDSPVALMRQPLLSPLLLSTCARIRVAITAPTRTRIP Subject 7532 PIWLTPKAFKPPNTSLTVEASASLGPQFSINIDSPVALMRQPLLSPLLLSTCARIRVAITAPTRTRIP 7735
Range 10: 6038 to 6088 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
46.4 bits(95) | 0.0 | 17/17(100%) | 0/17(0%) | Plus/Minus |
Query 1699 KRYWLHP*ISLWQKTQA 1749 KRYWLHP*ISLWQKTQA Subject 6038 KRYWLHP*ISLWQKTQA 6088
Range 11: 6675 to 7280 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
344.7 bits(746) | 0.0 | 164/202(81%) | 0/202(0%) | Minus/Plus |
Query 507 *K*FDKRAHH*GREFXXXXXXXXXXXXSFWEVHQAILSWLCCKREDKHT**VSVC**HFRF*RAIL*PISKYQCSEGGSLHKVQDLQIW*EYMQVPSILWF*CA**WA**SDYWFTV*VRCGGRPNLFWQGGS*FGGCARFRLQTSL*GTRCHI*CCHLIEIKRSDL***ALVLHCCNKT*KEVDNHAVKCLFSNLQIGPKL 1112 *K*FDKRAH+* REFHS H R SRHS+ FWEVHQAILSWLCCKREDKHT *VSVC * F F*R IL*PISKYQCS+GGSLHKV+DLQ+W +YM VPSILWF*CA** **SDY FT+*V C G NL WQGGS* G CA FR QTSL*GTR +I*CC+LIEIKRSDL***ALVLHCCNKT*+EVD+HAV+CLFSNL+IGPKL Subject 6675 *K*FDKRAHY*RREFHSFHGRRSRHSKPFWEVHQAILSWLCCKREDKHTR*VSVCE*LF*F*RVIL*PISKYQCSKGGSLHKVKDLQVWQKYM*VPSILWF*CA**QV**SDYRFTI*VGC*GCANLLWQGGS*LGSCA*FRFQTSL*GTRYYI*CCYLIEIKRSDL***ALVLHCCNKT*EEVDHHAVRCLFSNLRIGPKL 7280
Range 12: 6039 to 6389 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
272.3 bits(588) | 0.0 | 115/117(98%) | 0/117(0%) | Minus/Plus |
Query 1398 AWVFCHNEIYG*SQYLFVQHNGKYVVYLLKVRTDRVRVNCVCGR*YVRKQQIKA*N*A*RFPEYDLP*G*STIRHKPYILWMVFVQRRDL*ETSIDLGENLHCS*NG*PGKLH**LC 1748 AWVFCHNEIYG*SQYLFVQHNGKYVVYLLKVRTDRVRVNCVCGR*YVRKQQIKA*N*A*RFPEYDLP*G*STIRHKPYILWMVFVQRRDL*ETS+DLGENLHCS*NG PGKLH**LC Subject 6039 AWVFCHNEIYG*SQYLFVQHNGKYVVYLLKVRTDRVRVNCVCGR*YVRKQQIKA*N*A*RFPEYDLP*G*STIRHKPYILWMVFVQRRDL*ETSVDLGENLHCS*NGQPGKLH**LC 6389
Range 13: 7494 to 7781 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
219.6 bits(473) | 0.0 | 95/96(99%) | 0/96(0%) | Minus/Plus |
Query 6 **Y*RPPYMYYLFGILVLVGAVIATLILAHVDSNNGDSKGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDCHC*HC*MASP 293 **Y*RPPYMYYLFGILVLVGAVIATLILAHVDSNNGDSKGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEID HC*HC*MASP Subject 7494 **Y*RPPYMYYLFGILVLVGAVIATLILAHVDSNNGDSKGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HC*MASP 7781
Range 14: 7323 to 7457 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.4 bits(215) | 0.0 | 43/45(96%) | 0/45(0%) | Minus/Plus |
Query 330 IS*ESQICHTQGTTYINFHMEDVIGTAPKA*HIVVPDSLSRALGF 464 IS*ESQIC TQGTTYINFHMEDVIGTAPKA*HIVVPDSLS+ALGF Subject 7323 IS*ESQICRTQGTTYINFHMEDVIGTAPKA*HIVVPDSLSQALGF 7457
Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome
Sequence ID: KX274275.1 Length: 8724 Number of Matches: 17
Range 1: 6040 to 7713 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1259.8 bits(2743) | 0.0 | 525/558(94%) | 0/558(0%) | Minus/Plus |
Query 74 LGSFAIMRFTGEASTFLFNTMANMLFTFLRYELTGSESIAFAGDDMCANSRLRLKTEHEGFLNMICLKAKVQFVTNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFTAFTAGVPDTPNLSGRYIKPYSPGCAVKGRINILDEYLSVDDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNVRSDGLDEVITGSPFELDVEGVLICFGKEAVDLAVAHDSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCKLGQNCHSVDDRLGHWLGAAFPKKVKFAILRGQHTSISTWRTL*GRHQKHNILWSQTVFPELWAFWSV*EFCTFNNCDSINGLHICTICLEFWFL*AL*LQP*SLHMSTAIMVIVRVVS*GLQGSQY*LKIVAQVRHLLQQLRKC*EV*R 1747 LGSFAIMRFTGEASTFLFNTMANMLFTFLRYELTGSESIAFAGDDMCANSRLRLKTEHEGFLNMICLKAKVQFVTNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGEL+IEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIREL+TEDE+F AFTAGVPDTPNLSGRYIKPYSPGCAVKG+INILDEYLSV DISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFN+ SD DEVITGSPFELDVEGVLICFGKEAVDLA AH+SDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATC+LGQN H VDD GHWLGAAF KKVKFAI RGQHTSISTWR L*G HQKHNILWSQTV P+LWA WSV*EFC FNNC+SING+HICTICLEFWFL*AL LQP*SLHMSTAIMVI+ VVS*GLQGSQY*L+IVAQVR LLQQLRKC EV*R Subject 6040 LGSFAIMRFTGEASTFLFNTMANMLFTFLRYELTGSESIAFAGDDMCANSRLRLKTEHEGFLNMICLKAKVQFVTNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELAIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELVTEDENFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPVDDWRGHWLGAAFSKKVKFAIFRGQHTSISTWRAL*GWHQKHNILWSQTVIPKLWALWSV*EFCAFNNCNSINGIHICTICLEFWFL*ALQLQP*SLHMSTAIMVIIMVVS*GLQGSQY*LRIVAQVRRLLQQLRKCWEV*R 7713
Range 2: 6040 to 7779 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1083.4 bits(2358) | 0.0 | 484/580(83%) | 0/580(0%) | Plus/Minus |
Query 8 GSPSNNVNNDNQFLHQYG*PLKPSNLLTLP*LLKQVPHLGHNFQLILTPL*PL*DNPYYHHYCCRHVXXXXXXXXXXXEPEFQTDSTYMEAVNTITIIKGAKFSD*PKSPELGKDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDYQLLSMSCCSNVEPVLIIRGRIS*FQ*GDNIKCGTSYLTRKFEVGIVRNRQINCLLAKTN*DALHI*LKR*TSNHFIKPITTHIKTKG*KVLACILTKSAGLGLYEVSLPRNTDILIWVRE*HVKTGNVINRQILIKYVYPPFYSTTRRVWLDVPPRKIGSVGNSGCEGCETLVLSDELSYQTTFTATRNTMNDNWKSEHTIDTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQSRN*ASHLVLISNQEPHTVVVRXXXXXXXXXXXQLTQPVGIGHLNCIIINAIFQVTHFTSNANSLPNQLRFLKDPFFEQTPSTKCRVCDELYFSLKANHIQETFMLSFKP*SAVCAHIIARKRN*LGPCQFVP*EGKQHICHCVEQKGTGFTRKSHYGKRPK 1747 GSP +NVNNDNQFLHQYG*PLKPSNL LP*LLKQ PHLGHN QLILTPL*PL*DN YHHYCCRHVQGLGLQLQRLQEPEFQTDSTYM+AVNTITIIKG KFSD*PKSPELG DCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMP PIVNGV VLAQFAGC*KGISLHD Q LSMSCCSNVEPVLII GRI *FQ*G+NIKC TS+LTRKFE+ I+R+R INCLLAK N* L+I LK T NHFI+P+T IKTKG KVL CI KSAGL LYEVSLP NTDILIWVR+*HVKT NV RQILIKYVY PFYSTTRRVWLDVPPR++G V N+G +G E LVLSD+ SY TTFT TRN MN+NWKSEH I+THKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQ RN*A HLVLISN EPHTVVV FNF FIHHFN QL QPVGIG+LNCI+INA+ QVTHFTSNANSLPN+L FLKDPFF+QTPSTKC VCD+L+ S KANHI E FM S KP*SAV AH+IARK N*L PCQFVP*E +QHICHCVEQKGTGFTRKSHY KR K Subject 6040 GSPYDNVNNDNQFLHQYG*PLKPSNLPALP*LLKQAPHLGHNSQLILTPL*PL*DNHDYHHYCCRHVQGLGLQLQRLQEPEFQTDSTYMDAVNTITIIKGTKFSD*PKSPELGNDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMPTPIVNGVIVLAQFAGC*KGISLHDDQFLSMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSHLTRKFEIRIMRSR*INCLLAKAN*HTLNIQLKWRTCNHFIRPVTMQIKTKGQKVLTCIFAKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYLPFYSTTRRVWLDVPPREVGCVRNAGRKGYEILVLSDKFSY*TTFTTTRNAMNNNWKSEHAINTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQPRN*APHLVLISN*EPHTVVVCFNFLFIHHFNCQLAQPVGIGYLNCIVINAVLQVTHFTSNANSLPNELGFLKDPFFKQTPSTKCGVCDKLHLSFKANHI*EPFMFSLKP*SAVSAHVIARKSN*LRPCQFVP*ECEQHICHCVEQKGTGFTRKSHYSKRSK 7779
Range 3: 6684 to 7778 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
764.4 bits(1662) | 0.0 | 327/365(90%) | 0/365(0%) | Plus/Minus |
Query 9 ARHLTMLTMTINFFTNMANP*SLQTS*HFLNC*SKCLTWATIFN*Y*LPCSPYETTLTITIIAVDMCKD*GCNYSAYKNQNSKQIVHIWRPLILSQLLKVQNSQTDQKAQSSGKTVWDHNMLCFWCRPYNVLHVEIDVCCPLSMANLTFLGNAAPSQCPSLSSTE*QFWPNLQVAEKAFHCMIINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSESCATAKSTASLPKQIRTPSTSNSNGEPVITSSSPSLRTLKPKDRRYLHVFSPNLQVLDFMK*ASLGTLIF*YGSENSTSKPEMSSTDRYSSSMFILPFTAQPGEYGLMYLPERLGVSGTPAVKAVKLSSSVMSSLIK 1103 ARH+TMLTM INFFTNMANP*SLQTS HFLNC*SK LTWATI N*Y*LPCSPYETT+ ITIIAVDMCKD*GCN SAYKNQNSKQIVHIW PLIL QLLK QNSQTDQ+AQS G TVWDHNMLCFWC PYN LHVEIDVCCPL+MANLTFL NAAPSQCP SST * FWPN QVAEKAFHCM+INFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSE CA AKSTASLPKQI TPSTSNSNGEPVITSS SL LKPKDRRYLHVFSPNLQV DFMK*ASLGTLIF*YGSEN+TSKPEMS TDRYSSSMFI PFTAQPGEYGLMYLPERLGVSGTPAVKA+K SSSV SSLIK Subject 6684 ARHMTMLTMIINFFTNMANP*SLQTSQHFLNC*SKRLTWATILN*Y*LPCSPYETTMIITIIAVDMCKD*GCNCSAYKNQNSKQIVHIWMPLILLQLLKAQNSQTDQRAQSLGMTVWDHNMLCFWCHPYNALHVEIDVCCPLNMANLTFLENAAPSQCPRQSSTG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLIF*YGSENNTSKPEMSLTDRYSSSMFIFPFTAQPGEYGLMYLPERLGVSGTPAVKAMKFSSSVTSSLIK 7778
Range 4: 6039 to 6605 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
397.9 bits(862) | 0.0 | 178/189(94%) | 0/189(0%) | Plus/Minus |
Query 1182 VDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSMQFSRLPISRAMQILSQIN*GFLKIPSLNKHHPQNVGFVTNCTLALRQIIFRKPSCSVLSLNLLFAHISSPANAIDSDPVSSYLKKVNNIFAIVLNKKVLASPVNLIMAKDPS 1748 VDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISI NSP+L*A*DTSIA*LSMQFSRLPISRAMQILSQ++ GFLKIPSLNKHHPQNVGFVTNCTLALRQIIFR PSCSVLSLNLL AH+SSPA AIDSDPVSSYLK VNNIFAIVLNKKVLASPVNLI+AKDPS Subject 6039 VDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIANSPSL*A*DTSIA*LSMQFSRLPISRAMQILSQMSWGFLKIPSLNKHHPQNVGFVTNCTLALRQIIFRNPSCSVLSLNLLLAHMSSPAKAIDSDPVSSYLKNVNNIFAIVLNKKVLASPVNLIIAKDPS 6605
Range 5: 6692 to 7786 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
632.0 bits(1373) | 0.0 | 307/365(84%) | 0/365(0%) | Minus/Plus |
Query 1 ESSSLRTRVSQPSQPEFPTLPIFLGGTSSHTLLVVL*KGG*TYLMSICLLMTFPVLTCYSLTHIKISVFRGRLTS*SPRPADLVRIHASTFYPLVLMCVVMGLMK*LLVHRLS*MWRAS*FVLARRQLIWRLRTIPTSNFLVRYEVPHLMLSPY*NQEIRPLMISTGSTLLQQDIERS**SCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPRQSFPSSGLFGQSENFAPLIIVIVLTASIYVLSVWNSGSXXXXXXXXXXXXXRQQ*W***GLSHKGYRGVNIN*KLWPK*GTCFNS*GSVRRFEGFRG*PYW*RNXXXXXXXLDGEPLK 1095 E+ SLRTR+S P +P F T P LGGTSSHTLLVVL*KG *TYLMSICL +TF VLTCY LTHIKISVF+GRLTS*S RPADL +IH STF PLVL+C+V GLMK*L V LS M R *F LARRQLI RLR I SNFLVR EV HLML PY*NQ IRP MISTGSTLLQQDIER+* SCSEMPFQQPANWAKT+TPLTIG+GIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGP+QSFPSSGLFGQSENF PLIIVIVLTASIYVLSVWNSGSCRRCNCNPNPCTCRQQ*W** LSHKGYRGVNIN*+LWPK*G CFNS*GS RFEGFRG*PYW*RN*LSLLTL GEP + Subject 6692 ENLSLRTRIS*PLRPAFLTHPTSLGGTSSHTLLVVL*KGR*TYLMSICL*VTFLVLTCYFLTHIKISVFQGRLTS*SQRPADLAKIHVSTFCPLVLICIVTGLMK*LQVRHLSWMLRVC*FALARRQLI*RLRIILISNFLVRCEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIERN*SSCSEMPFQQPANWAKTITPLTIGVGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPKQSFPSSGLFGQSENFVPLIIVIVLTASIYVLSVWNSGSCRRCNCNPNPCTCRQQ*W**SWLSHKGYRGVNIN*ELWPK*GACFNS*GSAGRFEGFRG*PYW*RN*LSLLTLSYGEPTR 7786
Range 6: 6068 to 6430 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
223.8 bits(482) | 0.0 | 98/121(81%) | 0/121(0%) | Minus/Plus |
Query 1357 RVKPVPFCSTQWQICCLPS*GTN*QGPSQLRLRAMICAQTAD*GLKLSMKVS*I*FALRLKYNSSQTLHFVDGVCSKKGSLRNLN*FGREFALLVKWVTWKIALIIMQLRCPMPTGWVSCQ 1719 RVKPVPFCSTQWQICC S*GTN*QG SQL LRAM CA TAD*GL+L+MK S*I*FAL+L+ N SQT HFVDGVC KKGSLRN N FGREFALLVKWVTW+ ALI MQLR PMPTGW S Q Subject 6068 RVKPVPFCSTQWQICCSHS*GTN*QGLSQLLLRAMTCALTAD*GLRLNMKGS*I*FALKLRCNLSQTPHFVDGVCLKKGSLRNPNSFGREFALLVKWVTWRTALITMQLRYPMPTGWASWQ 6430
Range 7: 6438 to 6641 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
140.4 bits(300) | 0.0 | 62/68(91%) | 0/68(0%) | Minus/Plus |
Query 1146 DE*RRS*SALQLCAVPG*K*AQDEMLNFWIV*SYRLGLKCLAWCDYYE*LS*SFVYV*VCGCL*CAQI 1349 DE*R S*S LQLCAVP *K*AQDE+LNFW+V*SYRLGLKCLAWCDYYE*LS*SFVYV*VCGCL* AQI Subject 6438 DE*RGS*STLQLCAVPS*K*AQDEVLNFWVV*SYRLGLKCLAWCDYYE*LS*SFVYV*VCGCL*RAQI 6641
Range 8: 6161 to 7477 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
791.9 bits(1722) | 0.0 | 356/439(81%) | 0/439(0%) | Plus/Minus |
Query 310 KILRLTKKPRARERLSGTTICYAFGAVPITSSMWKLMYVVP*VWQI*LS*EMQHQANAQAYRQRSDSFGPICRLLKRHFTA*LSTSFYVLLQQCRTSAYHQRSDLLISIR*QHQMWHLVPHKEV*SRNRAQPPNQLPPCQNKLGRPPHLTQTVNQ*SLHQAHHYAH*NQRIEGTCMYSHQICRSWTL*SEPPSEH*YFDMGQRIARQNRKCHQQTDTHQVCLSSLLQHNQESMA*CTSQKDWECXXXXXXXXXNSRPQ**ALLSNYFYRYQEHYERQLEI*AHYRHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQLLLHSSFQLTTHPTCRHRTPQLHNYQCNFPGYPFHEQCKFSPKSIEVS*RSLL*TNTIHKM*GL*RIVL*P*GKSYSGNLHAQF*ALICCLRTYHRPQ 1626 KILRLTK+PRA E L GTTICYAFGA+PIT SMWKLMYVVP*+WQI*LS*+MQHQANA A RQR DSFGPI RLLKRHFTA* S SFYVLLQQCRTSAYH+RSD LISIR*QHQM HL PHKEV*++N AQP NQLPPCQ+KL P H TQ N *SLHQ HYA+*NQR EGT MY QICRS TL*SEPP EH*YFDMGQ+I RQN+KCH QTDTHQVCLSSLLQHNQESMA*CTSQ+ W C+E R *RL*NSRPQ* LL NYFY YQE YE+QLEI*A Y+HPQTQT*TKL*LSYS**SHHAKHLRPNL*LQT QKLS SSCAYF* GTAHSCS LQL LHSSFQL T P CRHR PQLH+YQC+ PGYPFHEQCKFSPK + VS*RSLL*TNTIHKM GL*+I * *GKSY G LH Q *ALICC RT HRPQ Subject 6161 KILRLTKEPRAWE*LFGTTICYAFGAIPITPSMWKLMYVVP*IWQI*LS*KMQHQANAHANRQRGDSFGPIRRLLKRHFTA**SISFYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLAPHKEV*NQNYAQPLNQLPPCQSKLAHPQHPTQMANL*SLHQTCHYAN*NQRTEGTYMYFRQICRSLTL*SEPPLEH*YFDMGQKITRQNQKCHLQTDTHQVCLSSLLQHNQESMA*CTSQRGWVCQERRP*RL*NSRPQ*QVLLLNYFYHYQERYEQQLEI*ARYKHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTTQKLSTSSCAYF*LGTAHSCSVLQLPLHSSFQLPTRPACRHRIPQLHSYQCSSPGYPFHEQCKFSPK*VGVS*RSLL*TNTIHKMWGL*QIAP*L*GKSYLGTLHVQS*ALICC*RTCHRPQ 7477
Range 9: 7532 to 7735 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
131.2 bits(280) | 0.0 | 65/68(96%) | 0/68(0%) | Plus/Minus |
Query 52 PIWLTPKAFKPPNTSLTVEASASLGPQFSINIDSPVALMRQXXXXXXXXXTCARIRVAITAPTRTRIP 255 PIWLTPKAFKPP+TSLTVEASASLGPQFSINIDSPVALMRQP LSPLLLSTCARIRVAI APTRTRIP Subject 7532 PIWLTPKAFKPPSTSLTVEASASLGPQFSINIDSPVALMRQP*LSPLLLSTCARIRVAIAAPTRTRIP 7735
Range 10: 6038 to 6088 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
36.8 bits(74) | 0.0 | 15/17(88%) | 0/17(0%) | Plus/Minus |
Query 1699 KRYWLHP*ISLWQKTQA 1749 KRYWLHP*ISL QK QA Subject 6038 KRYWLHP*ISL*QKIQA 6088
Range 11: 6762 to 7283 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
320.4 bits(693) | 0.0 | 141/174(81%) | 0/174(0%) | Minus/Plus |
Query 504 WEVHQAILSWLCCKREDKHT**VSVC**HFRF*RAIL*PISKYQCSEGGSLHKVQDLQIW*EYMQVPSILWF*CA**WA**SDYWFTV*VRCGGRPNLFWQGGS*FGGCARFRLQTSL*GTRCHI*CCHLIEIKRSDL***ALVLHCCNKT*KEVDNHAVKCLFSNLQIGPKLS 1025 WEVHQAILSWLCCKREDKHT**VSVC *HF F*R I *PISKYQCS+GGSLHKV+DLQIW +YM VPS+LWF* A** **SDY F +*V C G NL WQGGS*F GCA F QTSL*G RC+I*CC+LIEIK SDL **ALVLHCCNKT*KE+D+HAVKCLFSNL+IGPKLS Subject 6762 WEVHQAILSWLCCKREDKHT**VSVCK*HFWF*RVIF*PISKYQCSKGGSLHKVKDLQIWRKYM*VPSVLWF*FA**QV**SDYRFAI*VGC*GCANLLWQGGS*FSGCA*F*FQTSL*GARCYI*CCYLIEIKGSDLR**ALVLHCCNKT*KEIDHHAVKCLFSNLRIGPKLS 7283
Range 12: 6039 to 6389 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
220.1 bits(474) | 0.0 | 95/117(81%) | 0/117(0%) | Minus/Plus |
Query 1398 AWVFCHNEIYG*SQYLFVQHNGKYVVYLLKVRTDRVRVNCVCGR*YVRKQQIKA*N*A*RFPEYDLP*G*STIRHKPYILWMVFVQRRDL*ETSIDLGENLHCS*NG*PGKLH**LC 1748 AW+FC+NEIYG*SQYLFVQHNGKYVV++LKVRTDRV VNC CGR*+VR QQIKA*+* *R P+YDLP* * I HKP+ILWMVFV RRDL*ET LGENLHCS*NG*PG+LH**LC Subject 6039 AWIFCYNEIYG*SQYLFVQHNGKYVVHILKVRTDRV*VNCFCGR*HVR*QQIKA*D*T*RVPKYDLP*S*GAICHKPHILWMVFV*RRDL*ETPTHLGENLHCS*NG*PGELH**LC 6389
Range 13: 7494 to 7781 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
207.3 bits(446) | 0.0 | 90/96(94%) | 0/96(0%) | Minus/Plus |
Query 6 **Y*RPPYMYYLFGILVLVGAVIATLILAHVDSNNGDSKGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDCHC*HC*MASP 293 **Y*R PYMYYLFGILVLVGA IATLILAHVDSNNGD+ GCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEID HC*HC MASP Subject 7494 **Y*RHPYMYYLFGILVLVGAAIATLILAHVDSNNGDNHGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDYHC*HCHMASP 7781
Range 14: 7323 to 7454 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
85.4 bits(180) | 0.0 | 37/44(84%) | 0/44(0%) | Minus/Plus |
Query 333 IS*ESQICHTQGTTYINFHMEDVIGTAPKA*HIVVPDSLSRALG 464 I *ESQICH QGTTYINFHME VIG APKA*HIVVP+S S+ALG Subject 7323 IF*ESQICHIQGTTYINFHMEGVIGMAPKA*HIVVPNSHSQALG 7454
Range 15: 6464 to 6571 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
69.3 bits(145) | 0.0 | 33/36(92%) | 0/36(0%) | Minus/Plus |
Query 1216 TTTVCGSWLEISTR*DAQFLDCLKL*IRP*VFGMV* 1323 TTTVCGS LEISTR* AQFL CLKL*IRP*VFGMV* Subject 6464 TTTVCGS*LEISTR*GAQFLGCLKL*IRP*VFGMV* 6571
Rupestris stem pitting associated virus genes for RNA dependent RNA polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, 8.4 kDa hypothetical protein, coat protein, partial and complete cds, strain: OB1
Sequence ID: AB277783.1 Length: 2876 Number of Matches: 16
Range 1: 296 to 1969 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1272.6 bits(2771) | 0.0 | 528/558(95%) | 0/558(0%) | Minus/Plus |
Query 74 LGSFAIMRFTGEASTFLFNTMANMLFTFLRYELTGSESIAFAGDDMCANSRLRLKTEHEGFLNMICLKAKVQFVTNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFTAFTAGVPDTPNLSGRYIKPYSPGCAVKGRINILDEYLSVDDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNVRSDGLDEVITGSPFELDVEGVLICFGKEAVDLAVAHDSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCKLGQNCHSVDDRLGHWLGAAFPKKVKFAILRGQHTSISTWRTL*GRHQKHNILWSQTVFPELWAFWSV*EFCTFNNCDSINGLHICTICLEFWFL*AL*LQP*SLHMSTAIMVIVRVVS*GLQGSQY*LKIVAQVRHLLQQLRKC*EV*R 1747 LGSFAIMRFTGEASTFLFNTMANMLFTFLRYELTGSESIAFAGDDMCANSRLRLKTEHEGFLNMICLKAKVQFVTNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALS+WHGVIIMNNLVKALSTFEFVG+YSVLRFPVVVHSVPGSGKSSLIREL+TEDESF AFTAGVPDTPNLSGRYIKPYSPGCAVKG+INILDEYLSV DISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFN+ SD DEVITGSPFELDVEGVLICFGKEAVDLA AH+SDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATC+LGQN H +DD LGHWL A+FPKKVKFAILRGQHTSISTWR L*GRHQKHNILWSQTV P+LWAFWSV*EFC FNNC+SINGLHICTICLEFWFL*AL LQP*SLHMSTAIMVI+ VVS*GLQGSQY*L+IVAQVR LLQQLRKC EV*R Subject 296 LGSFAIMRFTGEASTFLFNTMANMLFTFLRYELTGSESIAFAGDDMCANSRLRLKTEHEGFLNMICLKAKVQFVTNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHGVIIMNNLVKALSTFEFVGIYSVLRFPVVVHSVPGSGKSSLIRELVTEDESFIAFTAGVPDTPNLSGRYIKPYSPGCAVKGKINILDEYLSVSDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNLHSDRSDEVITGSPFELDVEGVLICFGKEAVDLAAAHNSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCELGQNYHPIDDWLGHWLSASFPKKVKFAILRGQHTSISTWRAL*GRHQKHNILWSQTVIPKLWAFWSV*EFCAFNNCNSINGLHICTICLEFWFL*ALQLQP*SLHMSTAIMVIIMVVS*GLQGSQY*LRIVAQVRRLLQQLRKCWEV*R 1969
Range 2: 719 to 2035 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
835.0 bits(1816) | 0.0 | 371/439(85%) | 0/439(0%) | Plus/Minus |
Query 8 GSPSNNVNNDNQFLHQYG*PLKPSNLLTLP*LLKQVPHLGHNFQLILTPL*PL*DNPYYHHYCCRHVXXXXXXXXXXXEPEFQTDSTYMEAVNTITIIKGAKFSD*PKSPELGKDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDYQLLSMSCCSNVEPVLIIRGRIS*FQ*GDNIKCGTSYLTRKFEVGIVRNRQINCLLAKTN*DALHI*LKR*TSNHFIKPITTHIKTKG*KVLACILTKSAGLGLYEVSLPRNTDILIWVRE*HVKTGNVINRQILIKYVYPPFYSTTRRVWLDVPPRKIGSVGNSGCEGCETLVLSDELSYQTTFTATRNTMNDNWKSEHTIDTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQSRN*ASHLVLISNQEPHTVVV 1324 GSP +NVNNDNQFLHQYG*PLKPSNL TLP*LLKQ PHLGHN QLILTPL*PL*DN YHHYCCRHVQGLGLQLQRLQEPEFQTDSTYMEAVNTITIIKG KFSD*PKSPELG DCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRK STKPMPKPIVNGV VLAQFAGC*KGISLHD Q LSMSCCSNVEPVLII GRI *FQ*G+NIKC TSYLTRKFE+GI+R+R INCLLAK N L+I LK NHFI+P+T IKTKG KVL CI KSAGL LYEVSLP NTDILIWVR+*HVKT NV RQILIKYVY P YSTTRRVWL+VPPR++GSVGN+G +G ETLVLSD+ SY T FT TRN +N+NWKSEH I+THKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQ RN*A HLV ISN EPHTVVV Subject 719 GSPYDNVNNDNQFLHQYG*PLKPSNLPTLP*LLKQAPHLGHNSQLILTPL*PL*DNHDYHHYCCRHVQGLGLQLQRLQEPEFQTDSTYMEAVNTITIIKGTKFSD*PKSPELGNDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRK*STKPMPKPIVNGVIVLAQFAGC*KGISLHDDQFLSMSCCSNVEPVLIIGGRIP*FQ*GNNIKCSTSYLTRKFEIGIMRSR*INCLLAKANQHTLNIQLKWRACNHFIRPVTMQIKTKGQKVLTCIFAKSAGL*LYEVSLPWNTDILIWVRK*HVKTRNVTYRQILIKYVYLPLYSTTRRVWLNVPPREVGSVGNAGRKGYETLVLSDKFSY*TAFTTTRNAVNNNWKSEHAINTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQPRN*APHLVFISN*EPHTVVV 2035
Range 3: 940 to 2034 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
770.4 bits(1675) | 0.0 | 331/365(91%) | 0/365(0%) | Plus/Minus |
Query 9 ARHLTMLTMTINFFTNMANP*SLQTS*HFLNC*SKCLTWATIFN*Y*LPCSPYETTLTITIIAVDMCKD*GCNYSAYKNQNSKQIVHIWRPLILSQLLKVQNSQTDQKAQSSGKTVWDHNMLCFWCRPYNVLHVEIDVCCPLSMANLTFLGNAAPSQCPSLSSTE*QFWPNLQVAEKAFHCMIINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSESCATAKSTASLPKQIRTPSTSNSNGEPVITSSSPSLRTLKPKDRRYLHVFSPNLQVLDFMK*ASLGTLIF*YGSENSTSKPEMSSTDRYSSSMFILPFTAQPGEYGLMYLPERLGVSGTPAVKAVKLSSSVMSSLIK 1103 ARH+TMLTM INFFTNMANP*SLQTS HFLNC*SK LTWATI N*Y*LPCSPYETT+ ITIIAVDMCKD*GCN SAYKNQNSKQIVHIWRPLIL QLLK QNSQTDQKAQS G TVWDHNMLCFWCRPYN LHVEIDVCCPLSMANLTFLGN A SQCPS SS * FWPN QVAEKAFHCM+INFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSE CA AKSTASLPKQI TPSTSNSNGEPVITSS SL LKPKDRRYLHVFSPNLQV DFMK*ASLGTLIF*YGSEN+TSKPEMS TDRYSSSMFI PFTAQPGEYGLMYLPERLGVSGTPAVKA+KLSSSV SSLIK Subject 940 ARHMTMLTMIINFFTNMANP*SLQTSQHFLNC*SKRLTWATILN*Y*LPCSPYETTMIITIIAVDMCKD*GCNCSAYKNQNSKQIVHIWRPLILLQLLKAQNSQTDQKAQSLGMTVWDHNMLCFWCRPYNALHVEIDVCCPLSMANLTFLGNEALSQCPSQSSMG**FWPNSQVAEKAFHCMMINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSELCAAAKSTASLPKQISTPSTSNSNGEPVITSSDLSLCKLKPKDRRYLHVFSPNLQVFDFMK*ASLGTLIF*YGSENNTSKPEMSLTDRYSSSMFIFPFTAQPGEYGLMYLPERLGVSGTPAVKAMKLSSSVTSSLIK 2034
Range 4: 295 to 861 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
398.8 bits(864) | 0.0 | 178/189(94%) | 0/189(0%) | Plus/Minus |
Query 1182 VDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSMQFSRLPISRAMQILSQIN*GFLKIPSLNKHHPQNVGFVTNCTLALRQIIFRKPSCSVLSLNLLFAHISSPANAIDSDPVSSYLKKVNNIFAIVLNKKVLASPVNLIMAKDPS 1748 VDKALTKLFIIITPCQ LKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSP+L*A*DTSIA*LSMQFSRLPISRAMQILSQ++ GFLKIPSLNKHHPQNVGFVTNCTLALRQIIFR PSCSVLSLNLL AH+SSPA AIDSDPVSSYLK VNNIFAIVLNKKVLASPVNLI+AKDPS Subject 295 VDKALTKLFIIITPCQILKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPSL*A*DTSIA*LSMQFSRLPISRAMQILSQMSWGFLKIPSLNKHHPQNVGFVTNCTLALRQIIFRNPSCSVLSLNLLLAHMSSPAKAIDSDPVSSYLKNVNNIFAIVLNKKVLASPVNLIIAKDPS 861
Range 5: 296 to 682 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
255.4 bits(551) | 0.0 | 104/129(81%) | 0/129(0%) | Plus/Minus |
Query 1361 QLTQPVGIGHLNCIIINAIFQVTHFTSNANSLPNQLRFLKDPFFEQTPSTKCRVCDELYFSLKANHIQETFMLSFKP*SAVCAHIIARKRN*LGPCQFVP*EGKQHICHCVEQKGTGFTRKSHYGKRPK 1747 QL QPVGIG+LNCI+INA+ QVTHFTSNANSLPN+L FLKDPFF+QTPSTKC VCD+L+ S KANHI E FM S KP*SAV AH+IARK N*LGPCQFVP*E KQHI HCV+QKGTGFTRKSHY KR K Subject 296 QLAQPVGIGYLNCIVINAVLQVTHFTSNANSLPNELGFLKDPFFKQTPSTKCGVCDKLHLSFKANHI*EPFMFSLKP*SAVSAHVIARKSN*LGPCQFVP*ECKQHIRHCVKQKGTGFTRKSHYSKRSK 682
Range 6: 694 to 1539 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
449.2 bits(974) | 0.0 | 225/282(80%) | 0/282(0%) | Minus/Plus |
Query 504 DE*RRS*SALQLCAVPG*K*AQDEMLNFWIV*SYRLGLKCLAWCDYYE*LS*SFVYV*VCGCL*CAQIXXXXXXXXXXR*K*FDKRAHH*GREFXXXXXXXXXXXXSFWEVHQAILSWLCCKREDKHT**VSVC**HFRF*RAIL*PISKYQCSEGGSLHKVQDLQIW*EYMQVPSILWF*CA**WA**SDYWFTV*VRCGGRPNLFWQGGS*FGGCARFRLQTSL*GTRCHI*CCHLIEIKRSDL***ALVLHCCNKT*KEVDNHAVKCLFSNLQIGPKLS 1349 DE*R S*S LQLCAVP *K* QDE+LNFW+V*SYRLGLK LAWCDYYE*LS*SFVYV*VCG L* AQISSC S SW* *K F+KR H*GREFHSL+ R SRHSQ WEVH AILSWLCCK EDKHT**VSVC *HF F*R I *PISKYQCS+GGSLHKV+DLQIW +YM VPS+LWF* A** **SDY +*V C G +L WQGGS*F GCA FR QTSL*GTRC+I*CC+LIEIK SDL **ALVLHCCNKT*KE+D+HAVKCLFSNL+IGPKLS Subject 694 DE*RGS*STLQLCAVPS*K*TQDEVLNFWVV*SYRLGLKYLAWCDYYE*LS*SFVYV*VCGYL*RAQISSCCSQRSW*W*KQFNKRTCH*GREFHSLYGRRSRHSQPLWEVH*AILSWLCCKGEDKHT**VSVCK*HFWF*RVIF*PISKYQCSKGGSLHKVKDLQIWRKYM*VPSVLWF*FA**QV**SDYRLAI*VGC*GCADLLWQGGS*FSGCA*FRFQTSL*GTRCYI*CCYLIEIKGSDLR**ALVLHCCNKT*KEIDHHAVKCLFSNLRIGPKLS 1539
Range 7: 324 to 686 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
231.5 bits(499) | 0.0 | 99/121(82%) | 0/121(0%) | Minus/Plus |
Query 1357 RVKPVPFCSTQWQICCLPS*GTN*QGPSQLRLRAMICAQTAD*GLKLSMKVS*I*FALRLKYNSSQTLHFVDGVCSKKGSLRNLN*FGREFALLVKWVTWKIALIIMQLRCPMPTGWVSCQ 1719 RVKPVPFC TQW+ICCL S*GTN*QGPSQL LRAM CA TAD*GL+L+MK S*I*FAL+L+ N SQT HFVDGVC KKGSLRN N FGREFALLVKWVTW+ ALI MQLR PMPTGW SCQ Subject 324 RVKPVPFCLTQWRICCLHS*GTN*QGPSQLLLRAMTCALTAD*GLRLNMKGS*I*FALKLRCNLSQTPHFVDGVCLKKGSLRNPNSFGREFALLVKWVTWRTALITMQLRYPMPTGWASCQ 686
Range 8: 1750 to 2037 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
210.9 bits(454) | 0.0 | 90/96(94%) | 0/96(0%) | Minus/Plus |
Query 6 **Y*RPPYMYYLFGILVLVGAVIATLILAHVDSNNGDSKGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDCHC*HC*MASP 293 **Y*RPPYMYYLFGILVLVGA IATLILAHVDSNNGD+ GCLIRATGESILIENCGPSEALAST+KEVLGGLKALGVSHIGEEID HC*HC MASP Subject 1750 **Y*RPPYMYYLFGILVLVGAAIATLILAHVDSNNGDNHGCLIRATGESILIENCGPSEALASTIKEVLGGLKALGVSHIGEEIDYHC*HCHMASP 2037
Range 9: 1579 to 1713 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
96.4 bits(204) | 0.0 | 41/45(91%) | 0/45(0%) | Minus/Plus |
Query 330 IS*ESQICHTQGTTYINFHMEDVIGTAPKA*HIVVPDSLSRALGF 464 IS*ESQICHTQGTTYINFHME VIGTAPKA*HIVVP+S S+ALGF Subject 1579 IS*ESQICHTQGTTYINFHMEGVIGTAPKA*HIVVPNSHSQALGF 1713
Range 10: 948 to 2042 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
644.9 bits(1401) | 0.0 | 310/365(85%) | 0/365(0%) | Minus/Plus |
Query 1 ESSSLRTRVSQPSQPEFPTLPIFLGGTSSHTLLVVL*KGG*TYLMSICLLMTFPVLTCYSLTHIKISVFRGRLTS*SPRPADLVRIHASTFYPLVLMCVVMGLMK*LLVHRLS*MWRAS*FVLARRQLIWRLRTIPTSNFLVRYEVPHLMLSPY*NQEIRPLMISTGSTLLQQDIERS**SCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPRQSFPSSGLFGQSENFAPLIIVIVLTASIYVLSVWNSGSXXXXXXXXXXXXXRQQ*W***GLSHKGYRGVNIN*KLWPK*GTCFNS*GSVRRFEGFRG*PYW*RNXXXXXXXLDGEPLK 1095 E+ SLRTRVS P +P FPTLP LGGT SHTLLVVL*+G *TYLMSICL +TF VLTCY LTHIKISVF+GRLTS*S RPADL +IH STF PLVL+C+V GLMK*L LS M R *F LARRQLI RLR IP SNFLVRYEV HLML PY*NQ IRP MISTGSTLLQQDIER+* SCSEMPFQQPANWAKT+TPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGP+QSFPSSGLFGQSENF PLIIVIVLTASIYVLSVWNSGSCRRCNCNPNPCTCRQQ*W** LSHKGYRGVNIN*+LWPK*G CFN+*GSV RFEGFRG*PYW*RN*LSLLTL GEP + Subject 948 ENLSLRTRVS*PLRPAFPTLPTSLGGTLSHTLLVVL*RGR*TYLMSICL*VTFLVLTCYFLTHIKISVFQGRLTS*SQRPADLAKIHVSTFCPLVLICIVTGLMK*LQARHLSWMLRVC*FALARRQLI*RLRIIPISNFLVRYEVLHLMLLPY*NQGIRPPMISTGSTLLQQDIERN*SSCSEMPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPKQSFPSSGLFGQSENFVPLIIVIVLTASIYVLSVWNSGSCRRCNCNPNPCTCRQQ*W**SWLSHKGYRGVNIN*ELWPK*GACFNN*GSVGRFEGFRG*PYW*RN*LSLLTLSYGEPTR 2042
Range 11: 295 to 645 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
220.5 bits(475) | 0.0 | 95/117(81%) | 0/117(0%) | Minus/Plus |
Query 1398 AWVFCHNEIYG*SQYLFVQHNGKYVVYLLKVRTDRVRVNCVCGR*YVRKQQIKA*N*A*RFPEYDLP*G*STIRHKPYILWMVFVQRRDL*ETSIDLGENLHCS*NG*PGKLH**LC 1748 AW+FC+NEIYG*SQYLFV HNG+YVVY+LKVRTDRVRVNC CGR*+VR QQIKA*+* *R P+YDLP* * I HKP+ILWMVFV RRDL*ET LGENLHCS*NG*PG+LH**LC Subject 295 AWIFCYNEIYG*SQYLFV*HNGEYVVYILKVRTDRVRVNCFCGR*HVR*QQIKA*D*T*RVPKYDLP*S*GAICHKPHILWMVFV*RRDL*ETPTHLGENLHCS*NG*PGELH**LC 645
Range 12: 720 to 827 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
68.0 bits(142) | 0.0 | 32/36(89%) | 0/36(0%) | Minus/Plus |
Query 1216 TTTVCGSWLEISTR*DAQFLDCLKL*IRP*VFGMV* 1323 TTTVCGS LEI+TR* AQFL CLKL*IRP*VFGMV* Subject 720 TTTVCGS*LEINTR*GAQFLGCLKL*IRP*VFGMV* 827
Range 13: 867 to 911 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
31.8 bits(63) | 0.0 | 12/15(80%) | 0/15(0%) | Minus/Plus |
Query 1132 SLWVSIVCSDFQLSF 1176 SLWV I CSDFQL F Subject 867 SLWVFIACSDFQLLF 911
Range 14: 417 to 1733 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
775.0 bits(1685) | 0.0 | 355/439(81%) | 0/439(0%) | Plus/Minus |
Query 310 KILRLTKKPRARERLSGTTICYAFGAVPITSSMWKLMYVVP*VWQI*LS*EMQHQANAQAYRQRSDSFGPICRLLKRHFTA*LSTSFYVLLQQCRTSAYHQRSDLLISIR*QHQMWHLVPHKEV*SRNRAQPPNQLPPCQNKLGRPPHLTQTVNQ*SLHQAHHYAH*NQRIEGTCMYSHQICRSWTL*SEPPSEH*YFDMGQRIARQNRKCHQQTDTHQVCLSSLLQHNQESMA*CTSQKDWECXXXXXXXXXNSRPQ**ALLSNYFYRYQEHYERQLEI*AHYRHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQLLLHSSFQLTTHPTCRHRTPQLHNYQCNFPGYPFHEQCKFSPKSIEVS*RSLL*TNTIHKM*GL*RIVL*P*GKSYSGNLHAQF*ALICCLRTYHRPQ 1626 KILRLTKKPRA E L GTTICYAFGAVPIT SMWKLMYVVP*VWQI*LS*EM+H ANAQA RQ DSFGPI RLLKRHFTA* S SFYVLLQQCRTSAYH+RSD LISIR*QHQM HLVPHKEV*+RN AQP NQLPPCQ+K P H TQ + *SLHQ HYA+*NQR EGT MY QICRS TL*SEPP EH*YFDMGQ+I RQN+KCH QTDTHQVCLSS LQHNQESMA*CTSQ+ WECRE R *RL*NSRPQ* LL N FY YQE E+QLEI*A Y++PQTQT*TKL*LSYS**SHHAK+LRPNL*LQT QKLS SSC YF* GTAHSCS LQL LHSSFQLTT P CRHR PQLH+YQC+ PGYPFHEQCKFSPK + VS*RSLL*TNTIHKM GL*+I * *GKSY G LH Q *ALICC RT HRPQ Subject 417 KILRLTKKPRAWE*LFGTTICYAFGAVPITPSMWKLMYVVP*VWQI*LS*EMKH*ANAQANRQWGDSFGPIRRLLKRHFTA**SISFYVLLQQCRTSAYHRRSDPLISIR*QHQM*HLVPHKEV*NRNYAQPLNQLPPCQSKSAHPQHPTQMASL*SLHQTCHYAN*NQRTEGTYMYFRQICRSLTL*SEPPLEH*YFDMGQKITRQNQKCHLQTDTHQVCLSSPLQHNQESMA*CTSQRGWECRERRP*RL*NSRPQ*QVLLLNCFYHYQERCEQQLEI*ARYKYPQTQT*TKL*LSYS**SHHAKYLRPNL*LQTTQKLSTSSCVYF*LGTAHSCSVLQLPLHSSFQLTTRPACRHRIPQLHSYQCSSPGYPFHEQCKFSPK*VGVS*RSLL*TNTIHKMWGL*QIAP*L*GKSYLGTLHVQS*ALICC*RTCHRPQ 1733
Range 15: 1788 to 1991 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
130.7 bits(279) | 0.0 | 65/68(96%) | 0/68(0%) | Plus/Minus |
Query 52 PIWLTPKAFKPPNTSLTVEASASLGPQFSINIDSPVALMRQXXXXXXXXXTCARIRVAITAPTRTRIP 255 PIWLTPKAFKPPNTSL VEASASLGPQFSINIDSPVALMRQP LSPLLLSTCARIRVAI APTRTRIP Subject 1788 PIWLTPKAFKPPNTSLIVEASASLGPQFSINIDSPVALMRQP*LSPLLLSTCARIRVAIAAPTRTRIP 1991
Grapevine Rupestris stem pitting associated virus, complete genome
Sequence ID: AF026278.1 Length: 8725 Number of Matches: 19
Range 1: 6040 to 7713 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1067.3 bits(2323) | 0.0 | 445/558(80%) | 0/558(0%) | Minus/Plus |
Query 74 LGSFAIMRFTGEASTFLFNTMANMLFTFLRYELTGSESIAFAGDDMCANSRLRLKTEHEGFLNMICLKAKVQFVTNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFTAFTAGVPDTPNLSGRYIKPYSPGCAVKGRINILDEYLSVDDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNVRSDGLDEVITGSPFELDVEGVLICFGKEAVDLAVAHDSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCKLGQNCHSVDDRLGHWLGAAFPKKVKFAILRGQHTSISTWRTL*GRHQKHNILWSQTVFPELWAFWSV*EFCTFNNCDSINGLHICTICLEFWFL*AL*LQP*SLHMSTAIMVIVRVVS*GLQGSQY*LKIVAQVRHLLQQLRKC*EV*R 1747 LGSF+IMRFTGEASTFLFNTMANMLFTFLRYELTGSESIAFAGDDMCAN RLRLKTEHEGFLNMICLKAKVQFV+NPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMM EEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALS+WH + IMNNLVKALSTFEFVGV+SVL+FPVV+HSVPGSGKSSLIRELI+EDE+F AFTAGVPD+PNL+GRYIKPYSPGCAV G++NILDEYLSV D SGFDVLFSDPYQNIS+P+EAHFIKSKTCRFG NTCKYL SFGF V SDGLD+VI GSPF LDVEGVLICFGKEAVDLAVAH+S+FKLPCEVRG+TF+VVTLLKSRDPT +D+HWFYIAATRHR+KLIIMQ*+AFSA C+LG+N +S+D LGHW AAFP++VK + RGQH SIS+ L GR++K+N+LWS+ + P LW +*EFC N C N +H C +CLEFW * L*L SL M TA++ I +V S G SQ+*LK AQVR L R+C*EV*R Subject 6040 LGSFSIMRFTGEASTFLFNTMANMLFTFLRYELTGSESIAFAGDDMCANRRLRLKTEHEGFLNMICLKAKVQFVSNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHYLSIMNNLVKALSTFEFVGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQNISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDKVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWLGHWACAAFPEEVKSTLFRGQHPSISSRWALQGRYKKYNLLWSKAILP*LWDIRPI*EFCALNACHRSNRIHTCIVCLEFWSW*EL*LPSKSLLM*TAVVAITKVASLGPLESQF*LKTAAQVRPLHPL*RRC*EV*R 7713
Range 2: 6684 to 7772 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
498.7 bits(1082) | 0.0 | 232/363(64%) | 0/363(0%) | Plus/Minus |
Query 15 HLTMLTMTINFFTNMANP*SLQTS*HFLNC*SKCLTWATIFN*Y*LPCSPYETTLTITIIAVDMCKD*GCNYSAYKNQNSKQIVHIWRPLILSQLLKVQNSQTDQKAQSSGKTVWDHNMLCFWCRPYNVLHVEIDVCCPLSMANLTFLGNAAPSQCPSLSSTE*QFWPNLQVAEKAFHCMIINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSESCATAKSTASLPKQIRTPSTSNSNGEPVITSSSPSLRTLKPKDRRYLHVFSPNLQVLDFMK*ASLGTLIF*YGSENSTSKPEMSSTDRYSSSMFILPFTAQPGEYGLMYLPERLGVSGTPAVKAVKLSSSVMSSLIK 1103 H LTM INFF + ANP*SLQTS*H L+ K LTWA +FN* *L P E TL I AV M KD NY++Y++QNSKQ +H+ L L Q L+ QNSQ + +QS G+ DH+ L F RP N EID CCPL+ +LT GNAA +QCPS S E F PN Q AEKA +CMIINF LCLVAAM*NQCLSS VGSLDF +VTT V P TSQG+L SE CATA+STASLPK I TPSTS+ G+P +T S PSL TLKPK+ RYL VF+PNLQV D MK ASLG L+F YGSENSTSKPE S TD+YSSSMF P TA PGE GLMYLP RLG+SGTPAVKA+K SSS +SSLIK Subject 6684 HSANLTMIINFFNSTANP*SLQTS*HLLHSGCKGLTWAAVFN*N*LSSGPNEATLVIATTAVYMSKDLDGNYNSYQDQNSKQTIHV*MRLDL*QALRAQNSQIGRISQS*GRIALDHSKLYFLYRPCNAHREEIDGCCPLNKVDLTSSGNAAQAQCPSQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSELCATARSTASLPKHISTPSTSSVKGDPTMTLSKPSLLTLKPKEERYLQVFTPNLQVFDLMKCASLGMLMFWYGSENSTSKPEKSWTDKYSSSMFTFPGTAHPGE*GLMYLPVRLGLSGTPAVKAMKFSSSEISSLIK 7772
Range 3: 6039 to 6605 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
332.4 bits(719) | 0.0 | 153/189(81%) | 0/189(0%) | Plus/Minus |
Query 1182 VDKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSMQFSRLPISRAMQILSQIN*GFLKIPSLNKHHPQNVGFVTNCTLALRQIIFRKPSCSVLSLNLLFAHISSPANAIDSDPVSSYLKKVNNIFAIVLNKKVLASPVNLIMAKDPS 1748 VD ALTKLFII+ CQ LKA*SIASN PEIEHLILCLFLT+N TQL* ASTSSS IIS+D+SP+ A*+TSIA*LS+QFSRLPIS AM I SQIN*GFLKIPSLNKHHPQNVG TN TLALRQI+FRKPSCSVLS NL AH+SSPANAIDS+PVSSYL+KVNN+ AIVLNK VLASPVNLI+ DPS Subject 6039 VDNALTKLFIILK*CQILKA*SIASNRPEIEHLILCLFLTKNLTQL*WASTSSSVIISMDSSPSRYA*ETSIA*LSIQFSRLPISLAMHIRSQIN*GFLKIPSLNKHHPQNVGLETN*TLALRQIMFRKPSCSVLSRNLRLAHMSSPANAIDSEPVSSYLRKVNNMLAIVLNKNVLASPVNLIIENDPS 6605
Range 4: 6463 to 7773 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
532.1 bits(1155) | 0.0 | 254/437(58%) | 0/437(0%) | Plus/Minus |
Query 14 PSNNVNNDNQFLHQYG*PLKPSNLLTLP*LLKQVPHLGHNFQLILTPL*PL*DNPYYHHYCCRHVXXXXXXXXXXXEPEFQTDSTYMEAVNTITIIKGAKFSD*PKSPELGKDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDYQLLSMSCCSNVEPVLIIRGRIS*FQ*GDNIKCGTSYLTRKFEVGIVRNRQINCLLAKTN*DALHI*LKR*TSNHFIKPITTHIKTKG*KVLACILTKSAGLGLYEVSLPRNTDILIWVRE*HVKTGNVINRQILIKYVYPPFYSTTRRVWLDVPPRKIGSVGNSGCEGCETLVLSDELSYQTTFTATRNTMNDNWKSEHTIDTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQSRN*ASHLVLISNQEPHTVVV 1324 P + NNDNQFL QYG*PLKPSNLLT P Q PHLG +FQL LT P * N HYCC H QG G QLQ L PEFQTD+T M A+ +T IKG KFSD P PELGKDC GPQ V+L VPSL*RPP GN* MLSPE G+FDFLRKCST PMPKP VNGV V AQFAGC*KGI LHDYQ L +SC SNV+PV I+ G IS*FQ ++K TS TR FE +VRN +I+CLLAK * +I KR N F++ +T ++KT+G K+ A I K L E+ L RN D+L+WVRE H+KT +++ Q+LIKYV+ P + T R+ L+VP +I +V N+ CE E L+L + L Y TTFT TR+TMND WK +HT +T+KLK Q FN*+IHN MPNT*GLI FK + N*ASHL+L+ +QE +T+++ Subject 6463 PFSQFNNDNQFLQQYG*PLKPSNLLTPPSQWMQGPHLGRSFQLKLTLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAIRPMTSIKGTKFSDWPNIPELGKDCFGPQ*VILFVPSL*RPP*GN*WMLSPE*GRFDFLRKCSTSPMPKPTVNGVMVFAQFAGC*KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVVRNGEIHCLLAKAY*HPFNIQCKRRPHNDFVQTVTANLKTEGGKIFASIHAKPTSF*LDEMCLFRNADVLVWVREQHIKT*KILDGQVLIKYVHFPRHCTPWRIRLNVPSCEIRAVWNTCCESYEILILGN*LPY*TTFTTTRHTMNDYWKFKHTENTYKLKC*QCFN*IIHNTQIMPNT*GLINRFK*A*N*ASHLMLVPDQESNTIIM 7773
Range 5: 6055 to 6423 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
150.0 bits(321) | 0.0 | 65/123(53%) | 0/123(0%) | Plus/Minus |
Query 1364 LTQPVGIGHLNCIIINAIFQVTHFTSNANSLPNQLRFLKDPFFEQTPSTKCRVCDELYFSLKANHIQETFMLSFKP*SAVCAHIIARKRN*LGPCQFVP*EGKQHICHCVEQKGTGFTRKSHY 1732 L+QPV IG L II+N I QVTH SNA LP+ LR L+DPF + TPS +C + ++L LKANH+Q+T ML FKP ++ H+I K *L CQFVP +G+QH+ H V+QK GF K HY Subject 6055 LSQPVRIGDLYRIIVNTILQVTHLPSNAYPLPD*LRLLEDPFLK*TPSAECGIGNKLNLGLKANHVQKTLMLCFKPQPSISTHVITCKCY*LRACQFVPQKGEQHVSHSVKQKCAGFPCKPHY 6423
Range 6: 6707 to 7543 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
349.8 bits(757) | 0.0 | 172/279(62%) | 0/279(0%) | Minus/Plus |
Query 244 RTRVSQPSQPEFPTLPIFLGGTSSHTLLVVL*KGG*TYLMSICLLMTFPVLTCYSLTHIKISVFRGRLTS*SPRPADLVRIHASTFYPLVLMCVVMGLMK*LLVHRLS*MWRAS*FVLARRQLIWRLRTIPTSNFLVRYEVPHLMLSPY*NQEIRPLMISTGSTLLQQDIERS**SCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPRQSFPSSGLFGQSENFAPLIIVIVLTASIYVLSVWNSG 1080 R R+S SQ F T I GT S L V +G *TYLMS C F VL C S TH K S F R S S + L I A+ F P VL V K L L M + *+ LARRQ I LRT SN+LV+ EV L +*NQEI+P I TG TLL QD R+**SCS+MPFQQPANWAKT+TPLT+GLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGP+QSFPSSG+FGQSENF PL++VI L A I+VLSVWNSG Subject 6707 RMRIS*LSQQVFQTALISQEGTLSLILQGVQCRGK*TYLMSTCPSKIFQVLMCCSRTHTKTSAFLKRHISSSQKLVGLA*ILANIFPPSVLRLAVTVWTKSLWGRLLHWMLKGC*YALARRQWISPLRTTLNSNYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQQPANWAKTITPLTVGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSG 7543
Range 7: 6074 to 6424 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
130.7 bits(279) | 0.0 | 62/117(53%) | 0/117(0%) | Minus/Plus |
Query 1363 KPVPFCSTQWQICCLPS*GTN*QGPSQLRLRAMICAQTAD*GLKLSMKVS*I*FALRLKYNSSQTLHFVDGVCSKKGSLRNLN*FGREFALLVKWVTWKIALIIMQLRCPMPTGWVS 1713 KP FC T W CC P *GTN*Q SQ L+ M C GLK SM+V * *FALR +++ H DGV +KGS R+LN* G +ALL +WVTW+I L IM+ R PM TGW S Subject 6074 KPAHFCLTLWLTCCSPF*GTN*QALSQ*HLQVMTCVLIEGCGLKQSMRVF*T*FALRPRFSLFPIPHSADGVYLRKGSSRSLN*SGSGYALLGRWVTWRIVLTIMR*RSPMRTGWES 6424
Range 8: 7589 to 7744 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
68.0 bits(142) | 0.0 | 34/52(65%) | 0/52(0%) | Minus/Plus |
Query 43 QQ*W***GLSHKGYRGVNIN*KLWPK*GTCFNS*GSVRRFEGFRG*PYW*RN 198 QQ*W L H G+ VN N*KL PK*G C + G VRRFEGFRG*PY *RN Subject 7589 QQ*WQSPRLLH*GHWRVNFN*KLRPK*GPCIHCEGGVRRFEGFRG*PYC*RN 7744
Range 9: 6438 to 6635 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
61.6 bits(128) | 0.0 | 36/66(55%) | 0/66(0%) | Minus/Plus |
Query 1152 DE*RRS*SALQLCAVPG*K*AQDEMLNFWIV*SYRLGLKCLAWCDYYE*LS*SFVYV*VCGCL*CA 1349 D+ RS L LC + G + A DEMLNF +*S LGLK LA +YYE* S*S V +*VC C CA Subject 6438 DDRGRSGGPL*LC*ILGQEQA*DEMLNFRPI*SD*LGLKYLALFEYYE*FS*SIVNI*VCRCFQCA 6635
Range 10: 6272 to 6979 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
200.4 bits(431) | 0.0 | 123/236(52%) | 0/236(0%) | Plus/Minus |
Query 808 *NQRIEGTCMYSHQICRSWTL*SEPPSEH*YFDMGQRIARQNRKCHQQTDTHQVCLSSLLQHNQESMA*CTSQKDWECXXXXXXXXXNSRPQ**ALLSNYFYRYQEHYERQLEI*AHYRHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQLLLHSSFQLTTHPTCRHRTPQLHNYQCNFPGYPFHEQCKFSPKSIEVS*RSLL*TNTIHKM 1515 *N+R + C YS Q + T *+ P E * F MG R A QN K +T THQVC S H E+ A*CT D C E L*+L*NS P+ A L NYFY YQ HYE LEI*AH +H QTQ T L*L+YS* S++AK+LRPN LQ KLSISS A *P H+ + LL SSFQ P HR P HN Q N PGYP QC +P+ IE S*RSL * NTI +M Subject 6272 *NRRRKDICKYSRQTYKFLT**NVPL*EC*CFGMGPRTAHQNLKNLGRTSTHQVCSLSPALHTLENKA*CTFL*D*GCLEHLL*KL*NSHPRKLAPLLNYFYHYQAHYE*LLEI*AH*KHLQTQMLTML*LNYS*YSNNAKYLRPNQSLQIGLKLSISSYACS*PRI*HNYNGPPLLPRSSFQWIALPAGTHRRPLSHNCQYNSPGYPSP*QCISAPRLIEAS*RSLP*INTIRRM 6979
Range 11: 7034 to 7477 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
142.7 bits(305) | 0.0 | 80/148(54%) | 0/148(0%) | Plus/Minus |
Query 310 KILRLTKKPRARERLSGTTICYAFGAVPITSSMWKLMYVVP*VWQI*LS*EMQHQANAQAYRQRSDSFGPICRLLKRHFTA*LSTSFYVLLQQCRTSAYHQRSDLLISIR*QHQMWHLVPHKEV*SRNRAQPPNQLPPCQNKLGRPPH 753 KILRL + PRARE L TT+ Y F VP+T ++ KLM VVP*+ I*L EMQH+ NAQA Q S F PI RLLKRH TA*LS S VL QQC+TSAY DLLIS + +L HK +* ++ AQ + LPPCQ+ L H Subject 7034 KILRLAEYPRAREGLLWTTVSYTFCTVPVTPTVRKLMDVVP*IR*I*LPQEMQHKPNAQANCQWSYGFCPIRRLLKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKELRR*KLNL*LHKVI*IQSCAQRRDPLPPCQSILAPLQH 7477
Range 12: 7532 to 7726 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.4 bits(215) | 0.0 | 52/65(80%) | 0/65(0%) | Plus/Minus |
Query 61 LTPKAFKPPNTSLTVEASASLGPQFSINIDSPVALMRQXXXXXXXXXTCARIRVAITAPTRTRIP 255 LTPKAFKPPNTS TV+A ASLGPQFSI IDSPVALM+QP PLLLST ARI +AIT PT+TRIP Subject 7532 LTPKAFKPPNTSFTVDARASLGPQFSIKIDSPVALMKQPW*LPLLLST*ARIWMAITIPTKTRIP 7726
Range 13: 6161 to 6244 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
25.4 bits(49) | 0.0 | 15/28(54%) | 0/28(0%) | Plus/Minus |
Query 1543 P*GKSYSGNLHAQF*ALICCLRTYHRPQ 1626 P*GKS S N HA F*A T H Q Subject 6161 P*GKSCSENPHALF*AATFD*HTCHHLQ 6244
Range 14: 7515 to 7778 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
157.8 bits(338) | 0.0 | 72/88(82%) | 0/88(0%) | Minus/Plus |
Query 9 YMYYLFGILVLVGAVIATLILAHVDSNNGDSKGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDCHC*HC*MAS 272 YMY LFGILVLVG VIA ILAHVDS++G+ +GC IRATGESILIENCGPSEALASTVKEVLGGLKALGVS EEID HC* *MAS Subject 7515 YMYCLFGILVLVGIVIAIQILAHVDSSSGNHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVSRTVEEIDYHC*IG*MAS 7778
Range 15: 6039 to 6389 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
116.1 bits(247) | 0.0 | 58/117(50%) | 0/117(0%) | Minus/Plus |
Query 1398 AWVFCHNEIYG*SQYLFVQHNGKYVVYLLKVRTDRVRVNCVCGR*YVRKQQIKA*N*A*RFPEYDLP*G*STIRHKPYILWMVFVQRRDL*ETSIDLGENLHCS*NG*PGKLH**LC 1748 A + +NE+Y SQ++FV H G +VV+L +VRTDR+ VN +C *+V ++ A*N A* F E+DLP*G ++ + +IL MVF+ RDL E SI+LG ++HC +G*PG+L+* LC Subject 6039 ARIILYNEVYRGSQHIFV*HYG*HVVHLSEVRTDRL*VNSICR**HVC*SKVAA*NRA*GFSEHDLP*GQGSVCFQSHILRMVFI*GRDLQEASINLGADMHC*GDG*PGELY*QLC 6389
Range 16: 7050 to 7277 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
87.7 bits(185) | 0.0 | 42/76(55%) | 0/76(0%) | Minus/Plus |
Query 510 NLFWQGGS*FGGCARFRLQTSL*GTRCHI*CCHLIEIKRSDL***ALVLHCCNKT*KEVDNHAVKCLFSNLQIGPK 737 N+ WQGGS CA+ +Q +L* R + * + EIKRS+ *ALVLHCC KT E+DNHAV+CLFS+L+IG K Subject 7050 NMLWQGGSGSRRCAQL*IQITL*S*RFNF*RRNSFEIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFSSLRIGQK 7277
Range 17: 6765 to 6980 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
65.7 bits(137) | 0.0 | 34/72(47%) | 0/72(0%) | Minus/Plus |
Query 807 EVHQAILSWLCCKREDKHT**VSVC**HFRF*RAIL*PISKYQCSEGGSLHKVQDLQIW*EYMQVPSILWF* 1022 +VH A+ S +C E +HT**V V FRF* A+L PI K+Q S G+ H+V++L +W EY+Q+ +L F* Subject 6765 KVH*ALFSRVCSAGESEHT**VLVRPRFFRF*CAVLGPIPKHQHS*RGTFHQVKNL*VWREYLQISFLLRF* 6980
Grapevine rupestris stem pitting associated virus isolate GRSPaV GG, complete genome
Sequence ID: JQ922417.1 Length: 8758 Number of Matches: 18
Range 1: 6040 to 7713 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
1060.9 bits(2309) | 0.0 | 441/558(79%) | 0/558(0%) | Minus/Plus |
Query 74 LGSFAIMRFTGEASTFLFNTMANMLFTFLRYELTGSESIAFAGDDMCANSRLRLKTEHEGFLNMICLKAKVQFVTNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMNEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSVWHGVIIMNNLVKALSTFEFVGVYSVLRFPVVVHSVPGSGKSSLIRELITEDESFTAFTAGVPDTPNLSGRYIKPYSPGCAVKGRINILDEYLSVDDISGFDVLFSDPYQNISVPREAHFIKSKTCRFGENTCKYLLSFGFNVRSDGLDEVITGSPFELDVEGVLICFGKEAVDLAVAHDSDFKLPCEVRGATFDVVTLLKSRDPTSDDKHWFYIAATRHRKKLIIMQ*NAFSATCKLGQNCHSVDDRLGHWLGAAFPKKVKFAILRGQHTSISTWRTL*GRHQKHNILWSQTVFPELWAFWSV*EFCTFNNCDSINGLHICTICLEFWFL*AL*LQP*SLHMSTAIMVIVRVVS*GLQGSQY*LKIVAQVRHLLQQLRKC*EV*R 1747 LGSF+IMRFTGEASTFLFNTMANMLFTFLRYELTGSESIAFAGDDMCAN RLRLKTEHEGFLNMICLKAKVQFV+NPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMM EEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALS+WH + IMNNLVKALS FEFVGV+SVL+FPVV+HSVPGSGKSSLIRELI+EDE+F AFTAGVPD+PNL+GRYIKPYSPGCAV G++NILDEYLSV D SGFDVLFSDPYQNI +P+EAHFIKSKTCRFG NTCKYL SFGF V SDGLD+VI GSPF LDVEGVLICFGKEAVDLAVAH+S+FKLPCEVRG+TF+VVTLLKSRDPT +D+HWFYIAATRHR+KLIIMQ*+AFSA C+LG+N +S+D LGHW AAF ++VK + RGQH SI L GR++K+N+LWS+ + P+LW F +*EFC N C N +H C +CLEFW * L*L SL M TA++ I +V S G SQ+*LK AQVR L R+C EV*R Subject 6040 LGSFSIMRFTGEASTFLFNTMANMLFTFLRYELTGSESIAFAGDDMCANRRLRLKTEHEGFLNMICLKAKVQFVSNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAYRLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEAID*ALSIWHYLSIMNNLVKALSAFEFVGVFSVLKFPVVIHSVPGSGKSSLIRELISEDENFIAFTAGVPDSPNLTGRYIKPYSPGCAVPGKVNILDEYLSVQDFSGFDVLFSDPYQNIGIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDKVIVGSPFTLDVEGVLICFGKEAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHREKLIIMQ*DAFSAACELGKNHNSIDSWLGHWTCAAFSEEVKSTLFRGQHPSIPPRWALQGRYKKYNLLWSKAILPQLWDFRPI*EFCALNACHRFNRIHTCIVCLEFWSW*EL*LPSKSLLM*TAVVAITKVASLGPLESQF*LKTAAQVRPLRPL*RRCWEV*R 7713
Range 2: 6684 to 7772 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
485.9 bits(1054) | 0.0 | 227/363(63%) | 0/363(0%) | Plus/Minus |
Query 15 HLTMLTMTINFFTNMANP*SLQTS*HFLNC*SKCLTWATIFN*Y*LPCSPYETTLTITIIAVDMCKD*GCNYSAYKNQNSKQIVHIWRPLILSQLLKVQNSQTDQKAQSSGKTVWDHNMLCFWCRPYNVLHVEIDVCCPLSMANLTFLGNAAPSQCPSLSSTE*QFWPNLQVAEKAFHCMIINFFLCLVAAM*NQCLSSEVGSLDFNKVTTSNVAPRTSQGSLKSESCATAKSTASLPKQIRTPSTSNSNGEPVITSSSPSLRTLKPKDRRYLHVFSPNLQVLDFMK*ASLGTLIF*YGSENSTSKPEMSSTDRYSSSMFILPFTAQPGEYGLMYLPERLGVSGTPAVKAVKLSSSVMSSLIK 1103 H LTM INFF + ANP*SLQTS H L+ K LTWA +FN *L P E TL I AV M KD NY++Y++QNSKQ +H+ L L Q L+ QNSQ +K+QS G+ DH+ L F RP N ID CCPL+ +LT NAA QCPS S E F PN Q AEKA +CMIINF LCLVAAM*NQCLSS VGSLDF +VTT V P TSQG+L SE CATA+STASLPK I TPSTS+ G+P +T S PSL TLKPK+ RYL VF+PNLQV D MK ASLG +F YGSENSTSKPE S TD+YSSS+F P TA PGE GLMYLP RLG+SGTPAVKA+K SSS +SSLIK Subject 6684 HSANLTMIINFFNSTANP*SLQTSQHLLHSGRKGLTWAAVFNQN*LSSGPNEATLVIATTAVYMSKDLDGNYNSYQDQNSKQTIHV*MRLNL*QALRAQNSQIGRKSQSWGRIALDHSKLYFLYRPCNAHRGGIDGCCPLNKVDLTSSENAAQVQCPSQLSMELWFLPNSQAAEKASYCMIINFSLCLVAAM*NQCLSSGVGSLDFKRVTTLKVEPLTSQGNLNSELCATARSTASLPKHINTPSTSSVKGDPTMTLSKPSLLTLKPKEERYLQVFTPNLQVFDLMKCASLGMPMFWYGSENSTSKPEKSWTDKYSSSIFTFPGTAHPGE*GLMYLPVRLGLSGTPAVKAIKFSSSEISSLIK 7772
Range 3: 6039 to 6602 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
327.8 bits(709) | 0.0 | 150/188(80%) | 0/188(0%) | Plus/Minus |
Query 1185 DKALTKLFIIITPCQTLKA*SIASNNPEIEHLILCLFLTRNRTQL*CASTSSSFIISIDNSPNL*A*DTSIA*LSMQFSRLPISRAMQILSQIN*GFLKIPSLNKHHPQNVGFVTNCTLALRQIIFRKPSCSVLSLNLLFAHISSPANAIDSDPVSSYLKKVNNIFAIVLNKKVLASPVNLIMAKDPS 1748 D ALTKLFII+ CQ LKA*SIASN PEIEHLILCLFLT+N TQL* ASTSSS IIS+D+SP+ A*+TSIA*LS+QFS+LPIS AM I SQIN*GFLKIPSLNKHHPQNVG TN TLALRQI+FRKPSCSVLS NL AH+SSPANAIDS+PVSSYL+KVNN+ AIVLN+ VLASPVNLI+ DPS Subject 6039 DNALTKLFIILK*CQILKA*SIASNRPEIEHLILCLFLTKNLTQL*WASTSSSVIISMDSSPSRYA*ETSIA*LSIQFSKLPISLAMHIRSQIN*GFLKIPSLNKHHPQNVGLETN*TLALRQIMFRKPSCSVLSRNLRLAHMSSPANAIDSEPVSSYLRKVNNMLAIVLNRNVLASPVNLIIENDPS 6602
Range 4: 6463 to 7773 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
527.5 bits(1145) | 0.0 | 250/437(57%) | 0/437(0%) | Plus/Minus |
Query 14 PSNNVNNDNQFLHQYG*PLKPSNLLTLP*LLKQVPHLGHNFQLILTPL*PL*DNPYYHHYCCRHVXXXXXXXXXXXEPEFQTDSTYMEAVNTITIIKGAKFSD*PKSPELGKDCLGPQYVMLLVPSL*RPPCGN*CMLSPEYGKFDFLRKCSTKPMPKPIVNGVTVLAQFAGC*KGISLHDYQLLSMSCCSNVEPVLIIRGRIS*FQ*GDNIKCGTSYLTRKFEVGIVRNRQINCLLAKTN*DALHI*LKR*TSNHFIKPITTHIKTKG*KVLACILTKSAGLGLYEVSLPRNTDILIWVRE*HVKTGNVINRQILIKYVYPPFYSTTRRVWLDVPPRKIGSVGNSGCEGCETLVLSDELSYQTTFTATRNTMNDNWKSEHTIDTHKLKRRQSFN*VIHNNHTMPNT*GLIYSFKQSRN*ASHLVLISNQEPHTVVV 1324 P + NNDNQFL Q+G*PLKPSNL T P Q PHLG +FQ LT P * N HYCC H QG G QLQ L PEFQTD+T M A+ +T IKG KFSD PK PELGKDC GPQ V+L VPSL*RPP GN* MLSPE G+FDFLRKCST PMPKP VNGV V AQFAGC*KGI LHDYQ L +SC SNV+PV I+ G IS*FQ ++K TS TR FE +VRN +I+CLL K * +I* KR N F++ +T ++KT+G K+ A I K L E+ L RN D+L+WVRE H+KT +++ Q+LIKY++ P++ T R+ L+VP +I +V N+ CE + L+L + L Y TTFT TR+TMND WK +HT +T+KLK Q FN*+IHN MPNT*GLI FK + N*ASHL+L+ +QE +T+++ Subject 6463 PFSQFNNDNQFLQQHG*PLKPSNLPTPPSQWTQGPHLGRSFQSKLTLQWP**SNLGDCHYCCLHEQGFGWQLQFLPRPEFQTDNTCMNAIKPMTSIKGTKFSDWPKIPELGKDCFGPQ*VILFVPSL*RPPWGN*WMLSPE*GRFDFLRKCSTSPMPKPTVNGVMVFAQFAGC*KGILLHDYQFLPVSCSSNVKPVPILWGWIS*FQKSYDVKS*TSNFTR*FEFRVVRNSEIHCLLTKAY*HPFNI*CKRRPHNDFVQAVTANLKTEGGKIFASIHAKPTSF*LDEMCLFRNADVLVWVREQHIKT*KILDGQVLIKYIHFPWHCTPWRIRLNVPSCEIRAVWNTCCESYKILILGN*LPY*TTFTTTRHTMNDYWKFKHTENTYKLKC*QCFN*IIHNTQIMPNT*GLINRFK*A*N*ASHLMLVPDQESNTIIM 7773
Range 5: 6055 to 6423 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
148.2 bits(317) | 0.0 | 64/123(52%) | 0/123(0%) | Plus/Minus |
Query 1364 LTQPVGIGHLNCIIINAIFQVTHFTSNANSLPNQLRFLKDPFFEQTPSTKCRVCDELYFSLKANHIQETFMLSFKP*SAVCAHIIARKRN*LGPCQFVP*EGKQHICHCVEQKGTGFTRKSHY 1732 L+QPV IG L II+N I QVTH SNA LP+ LR L+DPF + TPS +C + ++L LKA+H+Q+T ML FKP ++ H+I K *L CQFVP +G+QH+ H V+QK GF K HY Subject 6055 LSQPVCIGDLYRIIVNTILQVTHLPSNAYPLPD*LRLLEDPFLK*TPSAECGIGNKLNLGLKADHVQKTLMLCFKPQPSISTHVITCKCY*LRACQFVPQKGEQHVSHSVKQKCAGFPSKPHY 6423
Range 6: 6707 to 7543 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
345.6 bits(748) | 0.0 | 170/279(61%) | 0/279(0%) | Minus/Plus |
Query 244 RTRVSQPSQPEFPTLPIFLGGTSSHTLLVVL*KGG*TYLMSICLLMTFPVLTCYSLTHIKISVFRGRLTS*SPRPADLVRIHASTFYPLVLMCVVMGLMK*LLVHRLS*MWRAS*FVLARRQLIWRLRTIPTSNFLVRYEVPHLMLSPY*NQEIRPLMISTGSTLLQQDIERS**SCSEMPFQQPANWAKTVTPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPRQSFPSSGLFGQSENFAPLIIVIVLTASIYVLSVWNSG 1080 R R+ SQ F T I GT S L V +G * YLMS C F VL C S TH K S F R S S + L I A+ F P VL V K L L *M + *+ L RRQ I LRT SN+LV+ EV L +*NQEI+P I TG TLL QD R+**SCS+MPFQQPANWAKT+TPLT+GLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGP+QSFPSSG+FGQSENF PL++VI L A I+VLSVWNSG Subject 6707 RMRIL*LSQQVFQTALISQEGTLSLILQGVQCQGK*IYLMSTCPSKIFQVLMCCSRTHTKTSAFLKRHISSSQKLVGLA*ILANIFPPSVLRLAVTAWTKSLWGRLLH*MLKGC*YALVRRQWISLLRTTLNSNYLVKLEVQLLTS*LF*NQEIQPQRIGTGFTLLLQDTGRN**SCSKMPFQQPANWAKTITPLTVGLGIGLVLHFLRKSNLPYSGDNIHQFPHGGRYRDGTKSITYCGPKQSFPSSGIFGQSENFVPLMLVIGLIAFIHVLSVWNSG 7543
Range 7: 6074 to 6424 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
127.1 bits(271) | 0.0 | 61/117(52%) | 0/117(0%) | Minus/Plus |
Query 1363 KPVPFCSTQWQICCLPS*GTN*QGPSQLRLRAMICAQTAD*GLKLSMKVS*I*FALRLKYNSSQTLHFVDGVCSKKGSLRNLN*FGREFALLVKWVTWKIALIIMQLRCPMPTGWVS 1713 KP FC T W CC P *GTN*Q SQ L+ M C GLK SM+V * * ALR +++ H DGV +KGS R+LN* G +ALL +WVTW+I L IM+ R PM TGW S Subject 6074 KPAHFCLTLWLTCCSPF*GTN*QALSQ*HLQVMTCVLIEGCGLKQSMRVF*T*SALRPRFSLFPIPHSADGVYLRKGSSRSLN*SGSGYALLGRWVTWRIVLTIMR*RSPMHTGWES 6424
Range 8: 6438 to 6635 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
61.6 bits(128) | 0.0 | 36/66(55%) | 0/66(0%) | Minus/Plus |
Query 1152 DE*RRS*SALQLCAVPG*K*AQDEMLNFWIV*SYRLGLKCLAWCDYYE*LS*SFVYV*VCGCL*CA 1349 D+ RS L LC + G + A DEMLNF +*S LGLK LA +YYE* S*S V +*VC C CA Subject 6438 DDRGRSGGPL*LC*ILGQEQA*DEMLNFRPI*SD*LGLKYLALFEYYE*FS*SIVSI*VCRCFQCA 6635
Range 9: 7589 to 7744 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
57.9 bits(120) | 0.0 | 31/52(60%) | 0/52(0%) | Minus/Plus |
Query 43 QQ*W***GLSHKGYRGVNIN*KLWPK*GTCFNS*GSVRRFEGFRG*PYW*RN 198 QQ*W L H G+ VN +*KL PK*G C + G V RFEGFRG*P *RN Subject 7589 QQ*WQSPRLLH*GHWRVNFD*KLRPK*GPCVHCEGGVGRFEGFRG*PCC*RN 7744
Range 10: 6272 to 7477 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
319.1 bits(690) | 0.0 | 200/402(50%) | 0/402(0%) | Plus/Minus |
Query 310 KILRLTKKPRARERLSGTTICYAFGAVPITSSMWKLMYVVP*VWQI*LS*EMQHQANAQAYRQRSDSFGPICRLLKRHFTA*LSTSFYVLLQQCRTSAYHQRSDLLISIR*QHQMWHLVPHKEV*SRNRAQPPNQLPPCQNKLGRPPHLTQTVNQ*SLHQAHHYAH*NQRIEGTCMYSHQICRSWTL*SEPPSEH*YFDMGQRIARQNRKCHQQTDTHQVCLSSLLQHNQESMA*CTSQKDWECXXXXXXXXXNSRPQ**ALLSNYFYRYQEHYERQLEI*AHYRHPQTQT*TKL*LSYS**SHHAKHLRPNL*LQTIQKLSISSCAYF*PGTAHSCSALQLLLHSSFQLTTHPTCRHRTPQLHNYQCNFPGYPFHEQCKFSPKSIEVS*RSLL*TNTIHKM 1515 KILRL + PRA E L TT+ Y F VP+T ++ +LM VVP*+ I*L +MQH++NAQA Q S F PI RLLKRH TA*LS S VL QQC+TSAY DLLIS + +L HK +* ++ AQ + LPP Q+ L HL L + H *N+R + C YS Q + T *+ P E F MG R A QN K +T THQV SL H E+ A*CT D C E L*+L*NS P+ A L NYFY YQ HYE LEI*AH +H QTQ T L*L+YS* S++AK+LRPN LQ KLSISS A *P H+ + LL SSFQ P HR P HN Q N P YP QC +P+ IE S*RSL * NTI +M Subject 6272 KILRLAENPRAGEGLLWTTVSYTFCTVPVTPTVGELMDVVP*IR*I*LPQKMQHKSNAQANCQWSYGFCPIRRLLKRHLTA*LSISPCVL*QQCKTSAYPLGLDLLISKELRR*KLNL*LHKVI*IQSCAQQRDPLPPYQSILTPLQHLV*KATPQ*LCPSRHC*P*NRRRKDICKYSRQTYKFLT**NVPL*ECRCFGMGPRTAHQNLKNLGRTSTHQVYSLSLALHTLENKA*CTFL*D*GCLEHLL*KL*NSHPRKLAPLLNYFYHYQAHYE*LLEI*AH*KHLQTQMLTML*LNYS*YSNNAKYLRPNQSLQIGLKLSISSYACS*PRI*HNYNGPPLLPRSSFQWIALPAGMHRRPLSHNCQYNSPSYPSP*QCISAPRLIEAS*RSLP*INTIRRM 7477
Range 11: 7532 to 7726 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
101.4 bits(215) | 0.0 | 52/65(80%) | 0/65(0%) | Plus/Minus |
Query 61 LTPKAFKPPNTSLTVEASASLGPQFSINIDSPVALMRQXXXXXXXXXTCARIRVAITAPTRTRIP 255 LTPKAFKPPNTS TV+A ASLGPQFSI IDSPVALM+QP PLLLST ARI +AIT PT+TRIP Subject 7532 LTPKAFKPPNTSFTVDARASLGPQFSIKIDSPVALMKQPW*LPLLLST*ARIWMAITIPTKTRIP 7726
Range 12: 6161 to 6244 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
24.0 bits(46) | 0.0 | 14/28(50%) | 0/28(0%) | Plus/Minus |
Query 1543 P*GKSYSGNLHAQF*ALICCLRTYHRPQ 1626 P*G+S S N HA F*A T H Q Subject 6161 P*GRSCSENPHALF*AATFD*HTCHHLQ 6244
Range 13: 7515 to 7778 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
157.8 bits(338) | 0.0 | 72/88(82%) | 0/88(0%) | Minus/Plus |
Query 9 YMYYLFGILVLVGAVIATLILAHVDSNNGDSKGCLIRATGESILIENCGPSEALASTVKEVLGGLKALGVSHIGEEIDCHC*HC*MAS 272 YMY LFGILVLVG VIA ILAHVDS++G+ +GC IRATGESILIENCGPSEALASTVKEVLGGLKALGVS EEID HC* *MAS Subject 7515 YMYCLFGILVLVGIVIAIQILAHVDSSSGNHQGCFIRATGESILIENCGPSEALASTVKEVLGGLKALGVSRAVEEIDYHC*IG*MAS 7778
Range 14: 6039 to 6389 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
107.8 bits(229) | 0.0 | 56/117(48%) | 0/117(0%) | Minus/Plus |
Query 1398 AWVFCHNEIYG*SQYLFVQHNGKYVVYLLKVRTDRVRVNCVCGR*YVRKQQIKA*N*A*RFPEYDLP*G*STIRHKPYILWMVFVQRRDL*ETSIDLGENLHCS*NG*PGKLH**LC 1748 A + +NE+Y SQ++ V H G +VV+L +VRTDR+ VN +C *+V ++ A*N A* F E+DLP*G ++ + +IL MVF+ RDL E SI+LG ++HC +G* G+L+* LC Subject 6039 ARIILYNEVYWGSQHISV*HYG*HVVHLSEVRTDRL*VNSICR**HVC*SKVAA*NRA*GFSEHDLP*GQGSVCFQSHILRMVFI*GRDLQEASINLGADMHC*GDG*LGELY*QLC 6389
Range 15: 7032 to 7277 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
84.9 bits(179) | 0.0 | 43/82(52%) | 0/82(0%) | Minus/Plus |
Query 510 RCGGRPNLFWQGGS*FGGCARFRLQTSL*GTRCHI*CCHLIEIKRSDL***ALVLHCCNKT*KEVDNHAVKCLFSNLQIGPK 755 RC N+ W GGS CA+ +Q +L* R + * + EIKRS+ *ALVLHCC KT E+DNHAV+CLFS+L+IG K Subject 7032 RC*RGVNMLW*GGSGSRCCAQL*IQITL*S*RFNF*RRNSFEIKRSNPRG*ALVLHCCYKTQGEIDNHAVRCLFSSLRIGQK 7277
Range 16: 6765 to 6980 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
64.3 bits(134) | 0.0 | 33/72(46%) | 0/72(0%) | Minus/Plus |
Query 807 EVHQAILSWLCCKREDKHT**VSVC**HFRF*RAIL*PISKYQCSEGGSLHKVQDLQIW*EYMQVPSILWF* 1022 +VH A+ S +C RE ++T**V V FRF* A+L PI K++ S G+ H+V++L +W EY+Q+ +L F* Subject 6765 KVH*ALFSRVCSARESEYT**VLVRPRFFRF*CAVLGPIPKHRHS*RGTFHQVKNL*VWREYLQISFLLRF* 6980
Nucleotide Sequence (783 letters)
Query ID: | ds2016-133_14 |
Query definition: | No definition line |
Query length: | 603 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
605.9 | 2856.2 | 27% | 2.09e-171 | 78% | KX274275.1 | |
601.3 | 2896.0 | 27% | 5.005e-170 | 79% | KR528585.1 | |
599.0 | 2816.0 | 28% | 2.449e-169 | 75% | AY368590.1 | |
586.7 | 1927.1 | 15% | 1.298e-165 | 42% | KR054734.1 | |
581.6 | 1836.2 | 29% | 4.272e-164 | 41% | HE591388.1 |
Alignments
Grapevine rupestris stem pitting associated virus isolate SK704 B, complete genome
Sequence ID: KX274275.1 Length: 8724 Number of Matches: 10
Range 1: 3871 to 4650 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
605.9 bits(1316) | 0.0 | 255/260(98%) | 0/260(0%) | Minus/Plus |
Query 4 KIGNGPQSIKVDELRKVKRSALDLLSLNGSKTTYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDEECKVAKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRRDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFINPMFDSRLPCNFKKGSMTAAFAD 783 KIGNGPQSIKVDELRKVKRSALDLLSLNGSK TYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK+DLEMDEECKV KAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIR DAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRF+NPMFDSRLPCNFKKGSMTAAFAD Subject 3871 KIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFAD 4650
Range 2: 3873 to 4652 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
553.2 bits(1201) | 0.0 | 244/260(94%) | 0/260(0%) | Plus/Minus |
Query 2 *SANAAVMEPFLKLHGNLESNIGFMNLRLSKLYLYDFPSRSLNMSLCSAPKMALSF*ESYVL*QGSPASEMKASRRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFATLHSSSISRSFLIELARARLGETKVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVRPPSKHP*SFSARSKLGKYVVFDPFRESRSRAERLTFRSSSTFIL*GPLPI 781 *SA AAVMEPFLKL GNLESNIGF NLRLSKLYLYDFPS +LNMSLCSAPK+ALSF*ESYVL*QGSPA EMKAS RITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAF TLHSSSISRS LIE ARARLGET VTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPV+PPSKHP*SFSA SKLGKYV+FDPFRESRSRA+RLTFRSSSTFIL*GPLPI Subject 3873 *SAKAAVMEPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSNLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHSSSISRSLLIEFARARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSALSKLGKYVIFDPFRESRSRADRLTFRSSSTFIL*GPLPI 4652
Range 3: 3871 to 4254 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
242.5 bits(523) | 0.0 | 108/128(84%) | 0/128(0%) | Plus/Minus |
Query 400 IHFQVLLD*IG*SPPR*NKSHKFPFRSLHEALV*ETLSSPKCTKYNCQFSLFDVGS*HSSKPRL*IIKFLVTYHTS*TSQQAPLKFFGPLKTWKICCF*PVQGK*VKS*TFNFSQLIHLYTLRPVTNL 783 IHF V D*I *SPPR*+K +KF FRSLHEALV*ETLSSPKCTK+NCQFSLFDV S*HSSKPRL*I+KFL+TYH S TSQQAPLKFF PLKTWKIC *PVQ K VKS*+FNFSQLIHLYTLRPVTNL Subject 3871 IHF*VPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCTKHNCQFSLFDVRS*HSSKPRL*IVKFLITYHASQTSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPVTNL 4254
Range 4: 4297 to 4653 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
216.9 bits(467) | 0.0 | 96/119(81%) | 0/119(0%) | Plus/Minus |
Query 1 LISKRGSHGTFFEVTW*S*IKHWIYEPPALQVVPI*LSFKKSQYVTLFSTQNGSIFLRIVCALTRITS**DESVTANNKET*INVTRGK*LNFIKDHAMTSL*ACNLSKENFEGNNIPA 357 +ISK GSHG FFEVT *S*IKHWIY+P ALQVVPI*LSF++ QYVTLF TQN SIFLRI+CALTRITS DESVTA+NK+T*I+VTR +*LNFIKDHAMTSL*ACN KE+F+GNNIPA Subject 4297 VISKSGSHGAFFEVTG*S*IKHWIYKPSALQVVPI*LSFEQPQYVTLFGTQNSSIFLRIICALTRITSKRDESVTADNKKT*IDVTRRE*LNFIKDHAMTSL*ACNFPKEDFKGNNIPA 4653
Range 5: 3873 to 4238 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
241.2 bits(520) | 0.0 | 103/122(84%) | 0/122(0%) | Minus/Plus |
Query 416 DW*RASKYKGG*AAKS*TFSS*PTFPERVKNNIFSKF*AGRKTSGVLAGRSNWCDK*REI**FKALACWSVNFRHQTKRIDSCTWYIWGWKEFPIQELHEEI*REICDFCFT*AGSSQFNQE 781 DW*RASKYKGG*AAKS*T SS*P F ERVK+NIFSKF* G KTSGVLAGR +W DK* EI* FKALACWSVNF HQTKRIDSC WYIWGWKEFPIQELHEEI*R+IC+ C T*AGSS+FNQ+ Subject 3873 DW*RASKYKGG*AAKS*TISS*PAFSERVKDNIFSKF*EGGKTSGVLAGRFDWRDK**EI*RFKALACWSVNF*HQTKRIDSCAWYIWGWKEFPIQELHEEI*RKICNICLT*AGSSKFNQK 4238
Range 6: 4305 to 4649 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
204.5 bits(440) | 0.0 | 91/115(79%) | 0/115(0%) | Minus/Plus |
Query 5 CCYLRSFP*KGYRPKGWSLRDL**SSAISPWLH*SMSPCYSP*RFHLTSW*SLSKHIRFSKR*SHFGC*TK*HIETS*RKVI*VQLGEPEVHKSNV*FKITM*LQKRFHDCRVC* 349 CCYL S P*+ YRPKGWSLRDL**SSAI WLH SMS CY *RFHL+ W*SLSKHI FSKR*S+FGC T+*HIE + RKVI*VQLGEP+V KSNV*FKIT+*LQKR HDCR C* Subject 4305 CCYL*SLP*ESYRPKGWSLRDL**SSAIPSWLHRSMSSCYPQ*RFHLSCW*SLSKHI*FSKR*SYFGCRTE*HIEVARRKVI*VQLGEPKVCKSNV*FKITL*LQKRLHDCRFC* 4649
Range 7: 4226 to 4651 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
204.1 bits(439) | 0.0 | 114/142(80%) | 0/142(0%) | Minus/Plus |
Query 3 IQSRRTWKWMKSXXXXXXXXXXXRAGMLLPSKFSLERLQA*RLVIA*SLMKFSYFPLVTLIYVSLLFAVTLSSH*LVILVKAHTILKKIEPFWVLNKVTY*DFLKESHIGTTWRAGGS*IQCLIQDYHVTSKKVP*LPRLLI 428 IQS+ T KWMKSVRW RQ NQRRRAGMLLP K SL +LQA*RLVIA*SLMKFSY LVT IYV LL AVTLSS LVILVKAH ILKKIE FWV N+VTY* KESHIGTTWRA G *IQCLIQDY VTSKK P*LP LLI Subject 4226 IQSKGT*KWMKSVRW*RQANQRRRAGMLLPLKSSLGKLQA*RLVIA*SLMKFSYSLLVTSIYVFLLSAVTLSSLLLVILVKAHMILKKIELFWVPNRVTY*GCSKESHIGTTWRAEGL*IQCLIQDYPVTSKKAP*LPLLLI 4651
Range 8: 3872 to 4177 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
194.0 bits(417) | 0.0 | 90/102(88%) | 0/102(0%) | Minus/Plus |
Query 477 RLVTGLKV*RWMSCEKLNVQLLTYFP*TGQKQHIFQVLSGPKNFRGACWEV*LV**VTRNLMIQSLGLLECQLPTSNKEN*QLYLVHLGLERVSYTRAS*RD 782 RLVTGLKV*RWMSCEKLN QLLT F *TGQ+ HIFQVL G KNFRGACWEV*L **V RNL IQSLGLLECQL TSNKEN*QL LVHLGLERVSYTRAS*RD Subject 3872 RLVTGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLRGRKNFRGACWEV*LA**VMRNLTIQSLGLLECQLLTSNKEN*QLCLVHLGLERVSYTRAS*RD 4177
Range 9: 4307 to 4651 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
205.0 bits(441) | 0.0 | 90/115(78%) | 0/115(0%) | Plus/Minus |
Query 3 DQQTRQSWNLF*SYMVILNQTLDL*TSGSPSCTYMTFLQEVSICHFVQHPKWLYLFENRMCFDKDHQLVR*KRHGE*QGDIDQCNQGEIAELHQRSRNDQPLGL*PF*GKLRR*Q 347 +QQ RQSW+LF*SY VILNQTLDL T GSPSCTYMTFL+ SICH V+HPK LYLFEN MCFDKDHQ R*KRH *Q DID+CNQ IAELHQRSRNDQPLGL* *G+L+R*Q Subject 4307 NQQKRQSWSLF*SYRVILNQTLDLQTFGSPSCTYMTFLRATSICHSVRHPK*LYLFENHMCFDKDHQQER*KRHCG*QEDIDRCNQEGIAELHQRSRNDQPLGL*LS*GRLQR*Q 4651
Range 10: 3872 to 4159 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
188.9 bits(406) | 0.0 | 83/96(86%) | 0/96(0%) | Plus/Minus |
Query 495 CIGNSFQPQMYQVQLSILFV*CRKLTLQQAKALNH*ISRHLSHQLDLPASTPEVFRPAQNLENMLFLTRSGKVGQELNV*LFAAHPPLYFEARYQS 782 CIGNSFQPQMYQ QLSILFV*C+KLTLQQAKALN *IS HLS Q +LPASTPEVF P+QNLENML LTRS K GQEL V*LFAAHPPLYFEARYQS Subject 3872 CIGNSFQPQMYQAQLSILFV*CQKLTLQQAKALNR*ISHHLSRQSNLPASTPEVFPPSQNLENMLSLTRSEKAGQELIV*LFAAHPPLYFEARYQS 4159
Grapevine rupestris stem pitting associated virus isolate Tannat Rspav1, complete genome
Sequence ID: KR528585.1 Length: 8595 Number of Matches: 10
Range 1: 3853 to 4632 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
601.3 bits(1306) | 0.0 | 253/260(97%) | 0/260(0%) | Minus/Plus |
Query 4 KIGNGPQSIKVDELRKVKRSALDLLSLNGSKTTYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDEECKVAKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRRDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFINPMFDSRLPCNFKKGSMTAAFAD 783 KIGNGPQSIKVDELRKVKRSALDLLSLNGSK TYFPSFERAEKLQGCLLGGLTGVISDEKFNDS+PWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK+DLEMDE CKV KAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIR DAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRF+NPMFDSRLPCNFKKGSMTAAFAD Subject 3853 KIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSRPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDEGCKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFAD 4632
Range 2: 3855 to 4634 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
549.1 bits(1192) | 0.0 | 242/260(93%) | 0/260(0%) | Plus/Minus |
Query 2 *SANAAVMEPFLKLHGNLESNIGFMNLRLSKLYLYDFPSRSLNMSLCSAPKMALSF*ESYVL*QGSPASEMKASRRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFATLHSSSISRSFLIELARARLGETKVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVRPPSKHP*SFSARSKLGKYVVFDPFRESRSRAERLTFRSSSTFIL*GPLPI 781 *SA AAVMEPFLKL G+LESNIGF NLRLSKLYLYDFPS SLNMSLCSAPK+ALSF*ESYVL*QGSPA EMKAS RITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAF TLH SSISRS LIE A+ARLGET VTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQG ESLNFSSLITPVRPPSKHP*SFSARSKLGKYV+FDPF+ESRSRA+RLTFRSSSTFIL*GPLPI Subject 3855 *SAKAAVMEPFLKLQGSLESNIGFTNLRLSKLYLYDFPSSSLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHPSSISRSLLIEFAKARLGETNVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGLESLNFSSLITPVRPPSKHP*SFSARSKLGKYVIFDPFKESRSRADRLTFRSSSTFIL*GPLPI 4634
Range 3: 3855 to 4220 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
249.9 bits(539) | 0.0 | 106/122(87%) | 0/122(0%) | Minus/Plus |
Query 416 DW*RASKYKGG*AAKS*TFSS*PTFPERVKNNIFSKF*AGRKTSGVLAGRSNWCDK*REI**FKALACWSVNFRHQTKRIDSCTWYIWGWKEFPIQELHEEI*REICDFCFT*AGSSQFNQE 781 DW* ASKYK G*AAKS*T SS*P F ERVK+NIFSKF*AG KTSGVLAGRSNWCDK REI**FKALACWSVNFRH TKRIDSCTWYIWGWKEFPIQELHEEI*R+IC+ C T*AG S+FNQ+ Subject 3855 DW*WASKYKSG*AAKS*TISS*PAFFERVKDNIFSKF*AGGKTSGVLAGRSNWCDKRREI**FKALACWSVNFRH*TKRIDSCTWYIWGWKEFPIQELHEEI*RKICNICLT*AGFSKFNQK 4220
Range 4: 4208 to 4633 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
217.3 bits(468) | 0.0 | 114/142(80%) | 0/142(0%) | Minus/Plus |
Query 3 IQSRRTWKWMKSXXXXXXXXXXXRAGMLLPSKFSLERLQA*RLVIA*SLMKFSYFPLVTLIYVSLLFAVTLSSH*LVILVKAHTILKKIEPFWVLNKVTY*DFLKESHIGTTWRAGGS*IQCLIQDYHVTSKKVP*LPRLLI 428 IQS+ TW+WM+ VRW RQ NQRRRAGML P KF L +LQA*RLVIA*SLMKFSY PLVT IYV LLFAVTLSS LVILVKAH ILKKIE FWVLN+VTY* K SHIGTTWRAGGS*I+CLIQDY VTSKK P*LP LLI Subject 4208 IQSKGTWRWMRGVRW*RQANQRRRAGMLSPLKFFLGKLQA*RLVIA*SLMKFSYSPLVTSIYVFLLFAVTLSSLLLVILVKAHMILKKIELFWVLNRVTY*GCSKGSHIGTTWRAGGS*IRCLIQDYPVTSKKAP*LPLLLI 4633
Range 5: 3853 to 4236 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
245.3 bits(529) | 0.0 | 109/128(85%) | 0/128(0%) | Plus/Minus |
Query 400 IHFQVLLD*IG*SPPR*NKSHKFPFRSLHEALV*ETLSSPKCTKYNCQFSLFDVGS*HSSKPRL*IIKFLVTYHTS*TSQQAPLKFFGPLKTWKICCF*PVQGK*VKS*TFNFSQLIHLYTLRPVTNL 783 IH QV D*I *SPPR*+K +KF FRSLHEALV*ETLSSPKCTKYNCQFSLF+VGS*HSSKPR *IIKFLV YHTS*TSQQAPLKFF PLKTWKIC *PVQ K VKS*+FNFSQLIH YTLRP+TNL Subject 3853 IHLQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCTKYNCQFSLFNVGS*HSSKPRP*IIKFLVAYHTS*TSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHFYTLRPITNL 4236
Range 6: 4279 to 4635 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
219.6 bits(473) | 0.0 | 98/119(82%) | 0/119(0%) | Plus/Minus |
Query 1 LISKRGSHGTFFEVTW*S*IKHWIYEPPALQVVPI*LSFKKSQYVTLFSTQNGSIFLRIVCALTRITS**DESVTANNKET*INVTRGK*LNFIKDHAMTSL*ACNLSKENFEGNNIPA 357 +ISK GSHG FFEVT *S*IKH IYEPPALQVVPI*L F++ QYVTLFSTQN SIFLRI+CALTRITS DESVTANNK+T*I+VTRG+*LNFIKDHAMTSL*ACN K+NF+G+NIPA Subject 4279 VISKSGSHGAFFEVTG*S*IKHRIYEPPALQVVPI*LPFEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANNKKT*IDVTRGE*LNFIKDHAMTSL*ACNFPKKNFKGDNIPA 4635
Range 7: 4287 to 4631 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
206.3 bits(444) | 0.0 | 91/115(79%) | 0/115(0%) | Minus/Plus |
Query 5 CCYLRSFP*KGYRPKGWSLRDL**SSAISPWLH*SMSPCYSP*RFHLTSW*SLSKHIRFSKR*SHFGC*TK*HIETS*RKVI*VQLGEPEVHKSNV*FKITM*LQKRFHDCRVC* 349 CC+L SF *+ YRPKGWSLRDL**SSAI PWLH SMS CYS *RFHL+ W*SLSKHI FSKR*S+FGC*T+*HIE + R+VI*VQLGEPEV KS+V*FK T+*LQKR HDCR C* Subject 4287 CCHL*SFS*ESYRPKGWSLRDL**SSAIPPWLHRSMSSCYSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEAARREVI*VQLGEPEVRKSDV*FKTTL*LQKRLHDCRFC* 4631
Range 8: 3854 to 4159 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
201.8 bits(434) | 0.0 | 91/102(89%) | 0/102(0%) | Minus/Plus |
Query 477 RLVTGLKV*RWMSCEKLNVQLLTYFP*TGQKQHIFQVLSGPKNFRGACWEV*LV**VTRNLMIQSLGLLECQLPTSNKEN*QLYLVHLGLERVSYTRAS*RD 782 RLV GLKV*+WMSCEKLN QLLT F *TGQ+ HIFQVLSG KNFRGACWEV*LV** TRNLMIQ LGLLECQLPT NKEN*QLYLVHLGLERVSYTRAS*RD Subject 3854 RLVMGLKV*KWMSCEKLNDQLLTCFL*TGQR*HIFQVLSGRKNFRGACWEV*LV**ATRNLMIQGLGLLECQLPTLNKEN*QLYLVHLGLERVSYTRAS*RD 4159
Range 9: 4289 to 4633 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
207.3 bits(446) | 0.0 | 91/115(79%) | 0/115(0%) | Plus/Minus |
Query 3 DQQTRQSWNLF*SYMVILNQTLDL*TSGSPSCTYMTFLQEVSICHFVQHPKWLYLFENRMCFDKDHQLVR*KRHGE*QGDIDQCNQGEIAELHQRSRNDQPLGL*PF*GKLRR*Q 347 +QQ RQSW+LF*SY V+LNQT DL TSGSPSCTYMT L+ SICH VQHPK LYLFEN MCFDKDHQ R*KRH E*Q DID+CNQG IAELHQRSRNDQPLGL* * KL+R*Q Subject 4289 NQQKRQSWSLF*SYRVVLNQTSDLRTSGSPSCTYMTSLRAASICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQGGIAELHQRSRNDQPLGL*LS*EKLQR*Q 4633
Range 10: 3854 to 4141 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
198.1 bits(426) | 0.0 | 88/96(92%) | 0/96(0%) | Plus/Minus |
Query 495 CIGNSFQPQMYQVQLSILFV*CRKLTLQQAKALNH*ISRHLSHQLDLPASTPEVFRPAQNLENMLFLTRSGKVGQELNV*LFAAHPPLYFEARYQS 782 CIGNSFQPQMYQVQLSILFV*CRKLTLQQAKALNH*ISR LSHQLDLPASTPEVF PAQNLENML LTRS K GQEL V*LFAAHP LYFEA YQS Subject 3854 CIGNSFQPQMYQVQLSILFV*CRKLTLQQAKALNH*ISRRLSHQLDLPASTPEVFPPAQNLENMLSLTRSKKAGQELIV*LFAAHPLLYFEAHYQS 4141
Rupestris stem pitting associated virus strain Syrah, complete genome
Sequence ID: AY368590.1 Length: 8742 Number of Matches: 11
Range 1: 3871 to 4650 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
599.0 bits(1301) | 0.0 | 252/260(97%) | 0/260(0%) | Minus/Plus |
Query 4 KIGNGPQSIKVDELRKVKRSALDLLSLNGSKTTYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDEECKVAKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRRDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFINPMFDSRLPCNFKKGSMTAAFAD 783 KIGNGPQSIKVDELRKVKRSALDLLSLNGSK TYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTS IKQRELTVVLGTFGAGKSFL+KSFMKRSEGKFVTFVSPRRALANSIK+DLEMD+ECKV KAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIR DAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRF+NPMFDSRLPCNFKKGSMTAAFAD Subject 3871 KIGNGPQSIKVDELRKVKRSALDLLSLNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSGIKQRELTVVLGTFGAGKSFLHKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDECKVVKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFVNPMFDSRLPCNFKKGSMTAAFAD 4650
Range 2: 3873 to 4652 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
545.0 bits(1183) | 0.0 | 240/260(92%) | 0/260(0%) | Plus/Minus |
Query 2 *SANAAVMEPFLKLHGNLESNIGFMNLRLSKLYLYDFPSRSLNMSLCSAPKMALSF*ESYVL*QGSPASEMKASRRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFATLHSSSISRSFLIELARARLGETKVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVRPPSKHP*SFSARSKLGKYVVFDPFRESRSRAERLTFRSSSTFIL*GPLPI 781 *SA AAVM+PFLKL GNLESNIGF NLRLSKLYLYDFPS SLNMSLCSAPK+ALSF*ESYVL*QGSPA EMKAS R+TRRHRSM*PGGNS TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAF TLHSSSISRS LIE ARARLGET VTNFPSDLFMKLL RKLFPAPNVPSTTVNSLCLM EVDTPASQGFESLNFSSLITPV+PPSKHP*SFSARSKLGKYV+FDPF+ESRSRA+RLTFRSSSTFIL*GPLPI Subject 3873 *SAKAAVMDPFLKLQGNLESNIGFTNLRLSKLYLYDFPSSSLNMSLCSAPKIALSF*ESYVL*QGSPAREMKASLRMTRRHRSM*PGGNSWTSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFTTLHSSSISRSLLIEFARARLGETNVTNFPSDLFMKLLCRKLFPAPNVPSTTVNSLCLMPEVDTPASQGFESLNFSSLITPVKPPSKHP*SFSARSKLGKYVIFDPFKESRSRADRLTFRSSSTFIL*GPLPI 4652
Range 3: 3871 to 4254 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
240.3 bits(518) | 0.0 | 106/128(83%) | 0/128(0%) | Plus/Minus |
Query 400 IHFQVLLD*IG*SPPR*NKSHKFPFRSLHEALV*ETLSSPKCTKYNCQFSLFDVGS*HSSKPRL*IIKFLVTYHTS*TSQQAPLKFFGPLKTWKICCF*PVQGK*VKS*TFNFSQLIHLYTLRPVTNL 783 IHFQV D*I *SPPR*+K +KF FRSLHEALV*ETLSSPKC K++CQFSLFD S HSSKPRL*I+KFL+TYH S*TSQQAPLKFF PLKTWKIC *PVQ K VKS*+FNFSQLIHLYTLRPVTNL Subject 3871 IHFQVPFD*IC*SPPR*DKCYKFSFRSLHEALV*ETLSSPKCAKHDCQFSLFDARSRHSSKPRL*IVKFLITYHAS*TSQQAPLKFFRPLKTWKICYL*PVQRKQVKS*SFNFSQLIHLYTLRPVTNL 4254
Range 4: 4297 to 4653 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
215.5 bits(464) | 0.0 | 95/119(80%) | 0/119(0%) | Plus/Minus |
Query 1 LISKRGSHGTFFEVTW*S*IKHWIYEPPALQVVPI*LSFKKSQYVTLFSTQNGSIFLRIVCALTRITS**DESVTANNKET*INVTRGK*LNFIKDHAMTSL*ACNLSKENFEGNNIPA 357 +ISK GSHG FEVT *S*IKHWIYEPPALQVVPI*L F++ QYVTLFSTQN SIFLRI+CALTRITS DESVTAN+K+T*I+VTRG+*L+FIKDHAMTSL*ACN K++F+GN+IPA Subject 4297 VISKGGSHGPLFEVTG*S*IKHWIYEPPALQVVPI*LPFEQPQYVTLFSTQNSSIFLRIICALTRITSKRDESVTANDKKT*IDVTRGE*LDFIKDHAMTSL*ACNFPKKDFKGNDIPA 4653
Range 5: 3873 to 4238 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
231.1 bits(498) | 0.0 | 101/122(83%) | 0/122(0%) | Minus/Plus |
Query 416 DW*RASKYKGG*AAKS*TFSS*PTFPERVKNNIFSKF*AGRKTSGVLAGRSNWCDK*REI**FKALACWSVNFRHQTKRIDSCTWYIWGWKEFPIQELHEEI*REICDFCFT*AGSSQFNQE 781 DW*RASKYKGG*AAKS*T SS*P F ERVK+NIFSKF*AG KTSGVLAGR NW DK* EI* FKALACWSV F HQTKRIDS W+IWGWKEFP QELHEEI*R+IC+ C T*AGSS+FNQ+ Subject 3873 DW*RASKYKGG*AAKS*TISS*PAFFERVKDNIFSKF*AGGKTSGVLAGRFNWRDK**EI*RFKALACWSVYFWHQTKRIDSRAWHIWGWKEFPTQELHEEI*RKICNICLT*AGSSKFNQK 4238
Range 6: 4305 to 4649 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
197.6 bits(425) | 0.0 | 89/115(77%) | 0/115(0%) | Minus/Plus |
Query 5 CCYLRSFP*KGYRPKGWSLRDL**SSAISPWLH*SMSPCYSP*RFHLTSW*SLSKHIRFSKR*SHFGC*TK*HIETS*RKVI*VQLGEPEVHKSNV*FKITM*LQKRFHDCRVC* 349 C YL S *+ YRPKGWSLRDL**S AI PWLH SMS C+S *RFHL+ W*SLSKHI FSKR*S+FGC*T+*HIE + R+VI*VQLGEPEV KSNV*FKIT+*LQK HDCR+C* Subject 4305 CRYL*SLS*ESYRPKGWSLRDL**SPAIPPWLHRSMSSCHSQ*RFHLSCW*SLSKHI*FSKR*SYFGC*TE*HIEAARREVI*VQLGEPEVRKSNV*FKITL*LQKGVHDCRLC* 4649
Range 7: 4226 to 4261 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
27.2 bits(53) | 0.0 | 9/12(75%) | 0/12(0%) | Minus/Plus |
Query 393 IQSRRTWKWMKS 428 IQS+ TWKWM S Subject 4226 IQSKGTWKWMMS 4261
Range 8: 4307 to 4651 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
200.4 bits(431) | 0.0 | 89/115(77%) | 0/115(0%) | Plus/Minus |
Query 3 DQQTRQSWNLF*SYMVILNQTLDL*TSGSPSCTYMTFLQEVSICHFVQHPKWLYLFENRMCFDKDHQLVR*KRHGE*QGDIDQCNQGEIAELHQRSRNDQPLGL*PF*GKLRR*Q 347 +QQ RQSW F*SY VILNQTLDL TSGSPSCTYMT L+ SICH VQHPK LYLFEN MCFDKDHQ R*KRH E*Q DID+CNQG IA LHQRSRNDQPLGL* * +L+R*+ Subject 4307 NQQRRQSWTPF*SYRVILNQTLDLRTSGSPSCTYMTSLRAASICHSVQHPK*LYLFENHMCFDKDHQQER*KRHCE*QEDIDRCNQGGIAGLHQRSRNDQPLGL*LS*ERLQR*R 4651
Range 9: 3872 to 4159 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
183.0 bits(393) | 0.0 | 81/96(84%) | 0/96(0%) | Plus/Minus |
Query 495 CIGNSFQPQMYQVQLSILFV*CRKLTLQQAKALNH*ISRHLSHQLDLPASTPEVFRPAQNLENMLFLTRSGKVGQELNV*LFAAHPPLYFEARYQS 782 C+GNSFQPQM Q +LSILFV*C+K TLQQAKALN *IS HLS QL+LPASTPEVF PAQNLENML LTRS K GQEL V*LFAAHPPLYFEARYQS Subject 3872 CVGNSFQPQMCQARLSILFV*CQK*TLQQAKALNR*ISHHLSRQLNLPASTPEVFPPAQNLENMLSLTRSKKAGQELIV*LFAAHPPLYFEARYQS 4159
Range 10: 4298 to 4651 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
190.8 bits(410) | 0.0 | 94/118(80%) | 0/118(0%) | Minus/Plus |
Query 3 AGMLLPSKFSLERLQA*RLVIA*SLMKFSYFPLVTLIYVSLLFAVTLSSH*LVILVKAHTILKKIEPFWVLNKVTY*DFLKESHIGTTWRAGGS*IQCLIQDYHVTSKKVP*LPRLLI 356 AGM LP K L +LQA*RLVIA*SLMK SY PLVT IYV L FAVTLSS LVILVKAH ILKKIE FWVLN+VTY* K SHIGTTWRAGGS*IQCLIQDY VTSK+ P*LP LLI Subject 4298 AGMSLPLKSFLGKLQA*RLVIA*SLMKSSYSPLVTSIYVFLSFAVTLSSLLLVILVKAHMILKKIELFWVLNRVTY*GCSKGSHIGTTWRAGGS*IQCLIQDYPVTSKRGP*LPPLLI 4651
Range 11: 3872 to 4177 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
186.2 bits(400) | 0.0 | 87/102(85%) | 0/102(0%) | Minus/Plus |
Query 477 RLVTGLKV*RWMSCEKLNVQLLTYFP*TGQKQHIFQVLSGPKNFRGACWEV*LV**VTRNLMIQSLGLLECQLPTSNKEN*QLYLVHLGLERVSYTRAS*RD 782 RLVTGLKV*RWMSCEKLN QLLT F *TGQ+ HIFQVLSG KNFRGACWEV*L **V RNL IQSLGLLEC L SNKEN*Q L HLGLERVSYTRAS*RD Subject 3872 RLVTGLKV*RWMSCEKLNDQLLTCFL*TGQR*HIFQVLSGRKNFRGACWEV*LA**VMRNLTIQSLGLLECLLLASNKEN*QSCLAHLGLERVSYTRAS*RD 4177
Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome
Sequence ID: KR054734.1 Length: 8753 Number of Matches: 11
Range 1: 3871 to 4650 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
586.7 bits(1274) | 0.0 | 243/260(93%) | 0/260(0%) | Minus/Plus |
Query 4 KIGNGPQSIKVDELRKVKRSALDLLSLNGSKTTYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDEECKVAKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRRDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFINPMFDSRLPCNFKKGSMTAAFAD 783 KIGNGPQSIKVDELRKVKRSALDLLS+NGSK TYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWL+G+STSDIK RELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK+DLEMD+ CKVAKAGKSKKEGWDVVTFEVFLRK+ LKAGHCVIFDEVQLFPPGYIDLCLL IR DAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYN+ESRRF+NPMF+SRLPC+FKKGSMTAAFAD Subject 3871 KIGNGPQSIKVDELRKVKRSALDLLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLSGISTSDIKSRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKRDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKIANLKAGHCVIFDEVQLFPPGYIDLCLLTIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFAD 4650
Range 2: 3873 to 4652 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
446.4 bits(968) | 0.0 | 204/260(78%) | 0/260(0%) | Plus/Minus |
Query 2 *SANAAVMEPFLKLHGNLESNIGFMNLRLSKLYLYDFPSRSLNMSLCSAPKMALSF*ESYVL*QGSPASEMKASRRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFATLHSSSISRSFLIELARARLGETKVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVRPPSKHP*SFSARSKLGKYVVFDPFRESRSRAERLTFRSSSTFIL*GPLPI 781 *SANAAVMEPFLK HG+L+SNIGF NLRLS LYL D PS +LN+SLCSAP +A SF ESYVL*QGSPA EMKAS R+ R RS+*PGGNS*TSSK+TQ PAFR FLR TSKVTTSQPSFFDLPAFATL SSIS+S LIE ARA LGETKVTN PSDLF+KLLYRKL PAP VPSTTVNS L+SEVD P S G ESLNFSSLITPV+PPSKHP SFSA SKLGK V+FDPF E RSRA+R TF SSSTF+L GPLPI Subject 3873 *SANAAVMEPFLK*HGSLDSNIGFTNLRLSMLYL*DLPSSNLNISLCSAPSIARSFWESYVL*QGSPAREMKASLRMVNRQRSI*PGGNS*TSSKMTQWPAFRFAIFLRNTSKVTTSQPSFFDLPAFATLQLSSISKSLLIEFARALLGETKVTNLPSDLFIKLLYRKLLPAPKVPSTTVNSRDLISEVDIPESHGLESLNFSSLITPVKPPSKHPCSFSALSKLGK*VIFDPFIERRSRADRFTFLSSSTFMLCGPLPI 4652
Range 3: 3871 to 4254 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
151.8 bits(325) | 0.0 | 71/128(55%) | 0/128(0%) | Plus/Minus |
Query 400 IHFQVLLD*IG*SPPR*NKSHKFPFRSLHEALV*ETLSSPKCTKYNCQFSLFDVGS*HSSKPRL*IIKFLVTYHTS*TSQQAPLKFFGPLKTWKICCF*PVQGK*VKS*TFNFSQLIHLYTLRPVTNL 783 IHFQV +*I *SP *NK ++F FR LH+ALV + +S K K++CQ S FD+ S*+S +P L I+K L+TYHTS* Q PL+ F P KTWK+ * + K VKS +F+FSQLIHLY LR V NL Subject 3871 IHFQVSFN*IC*SPSG*NKGYEFAFRPLHKALVQKAFTSSKGAKHDCQLSRFDIRS*YS*EPWLGIVKLLITYHTS*AP*QTPLQLFSPFKTWKVSYL*SIH*KEVKSRSFHFSQLIHLYALRAVANL 4254
Range 4: 4300 to 4653 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
133.5 bits(285) | 0.0 | 57/118(48%) | 0/118(0%) | Plus/Minus |
Query 1 LISKRGSHGTFFEVTW*S*IKHWIYEPPALQVVPI*LSFKKSQYVTLFSTQNGSIFLRIVCALTRITS**DESVTANNKET*INVTRGK*LNFIKDHAMTSL*ACNLSKENFEGNNIP 354 +ISK SHG E+TW S +KHWI++PP L VVP+ L+ K SQY+TL S+Q +I L ++CALT ITS +ES+T+ +T +N+ + LN IK+ AM L CN K++F+G+N+P Subject 4300 IISKCCSHGALLEMTWQSGLKHWIHKPPTLNVVPVGLTLK*SQYITLLSSQYCAILLGVICALTGITSKRNESITSYG*QTKVNIAWREQLNLIKNDAMACLQVCNFPKKHFKGHNVP 4653
Range 5: 3873 to 4232 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
148.6 bits(318) | 0.0 | 63/120(52%) | 0/120(0%) | Minus/Plus |
Query 422 DW*RASKYKGG*AAKS*TFSS*PTFPERVKNNIFSKF*AGRKTSGVLAGRSNWCDK*REI**FKALACWSVNFRHQTKRIDSCTWYIWGWKEFPIQELHEEI*REICDFCFT*AGSSQFN 781 DW R +++KGG*A KS T S*P F E +K+N+ SKF* G K +GV A NWCDK* E+* F+A+A ++NF +Q R+DS W++W W + +QEL+EE+*R+I + CFT GSS+FN Subject 3873 DWQRPAEHKGG*AEKSETICS*PPFNEWIKDNLLSKF*KG*KAAGVFARGLNWCDK**EV*RFQAMALRNINF*YQISRVDSRAWHLWSW*KLSVQELYEEV*RQIRNLCFTQKGSSKFN 4232
Range 6: 4301 to 4651 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
102.3 bits(217) | 0.0 | 57/117(49%) | 0/117(0%) | Minus/Plus |
Query 3 GMLLPSKFSLERLQA*RLVIA*SLMKFSYFPLVTLIYVSLLFAVTLSSH*LVILVKAHTILKKIEPFWVLNKVTY*DFLKESHIGTTWRAGGS*IQCLIQDYHVTSKKVP*LPRLLI 353 G L P K L +LQ *R IA LM+F+ L +V + V LS LVI VKAH K+I +W L++V Y*D+L+ S GTT R GG *IQCL D HV S++ P*L LLI Subject 4301 GTL*PLKCFLGKLQT*RQAIASFLMRFNCSLQAILTFVC*PYEVMLSFLLLVIPVKAHMTPKRIAQYWELSRVIY*DYLRVSPTGTTLRVGGL*IQCLSPDCHVISRRAP*LQHLLI 4651
Range 7: 4226 to 4255 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
24.0 bits(46) | 0.0 | 7/10(70%) | 0/10(0%) | Minus/Plus |
Query 399 IQSRRTWKWM 428 IQ + TWKWM Subject 4226 IQLKETWKWM 4255
Range 8: 3872 to 4159 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.9 bits(192) | 0.0 | 48/96(50%) | 0/96(0%) | Plus/Minus |
Query 495 CIGNSFQPQMYQVQLSILFV*CRKLTLQQAKALNH*ISRHLSHQLDLPASTPEVFRPAQNLENMLFLTRSGKVGQELNV*LFAAHPPLYFEARYQS 782 C + +Q Q Q +LS L +* +KL +A A N * S HLSHQL A+TP F+P QNLE+ L L S K GQE V LF+AHPPL R QS Subject 3872 CTESFYQLQRCQARLSTLEI*YQKLIFLRAMAWNR*TSHHLSHQLSPLANTPAAFQPFQNLESKLSLIHSLKGGQEQIVSLFSAHPPLCSAGRCQS 4159
Range 9: 4340 to 4651 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
80.8 bits(170) | 0.0 | 44/104(42%) | 0/104(0%) | Plus/Minus |
Query 3 DQQTRQSWNLF*SYMVILNQTLDL*TSGSPSCTYMTFLQEVSICHFVQHPKWLYLFENRMCFDKDHQLVR*KRHGE*QGDIDQCNQGEIAELHQRSRNDQPLGL 314 +QQ QSW+ *+ M + QTLD TS S CT T+ Q +SI H Q P F + MCFD+DHQ +*K H D Q + E HQ+ RN P GL Subject 4340 NQQMLQSWSPS*NDMAVWTQTLDSQTSDSQCCTCRTYPQVISIYHSAQLPVLRDPFGSHMCFDRDHQQEK*KHHFVWLTDKGQYSLEGTVEPHQK*RNGLPSGL 4651
Range 10: 3872 to 4174 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
81.7 bits(172) | 0.0 | 53/101(52%) | 0/101(0%) | Minus/Plus |
Query 480 RLVTGLKV*RWMSCEKLNVQLLTYFP*TGQKQHIFQVLSGPKNFRGACWEV*LV**VTRNLMIQSLGLLECQLPTSNKEN*QLYLVHLGLERVSYTRAS*R 782 RL T + *RWMS EK N LLT F * Q+ FQVL G K+ RG C *LV**V R+L I S G E QL SN E+*Q L L L + TRA *R Subject 3872 RLATARRA*RWMS*EK*NDLLLTSFQ*MDQR*LTFQVLKGLKSCRGVC*GA*LV**VMRSLTIPSHGSQEYQLLISNLES*QSCLAPLELVKAFCTRAL*R 4174
Range 11: 4308 to 4649 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
80.3 bits(169) | 0.0 | 49/114(43%) | 0/114(0%) | Minus/Plus |
Query 5 CYLRSFP*KGYRPKGWSLRDL**SSAISPWLH*SMSPCYSP*RFHLTSW*SLSKHIRFSKR*SHFGC*TK*HIETS*RKVI*VQLGEPEVHKSNV*FKITM*LQKRFHDCRVC* 346 C L S *+ +P+G LR ** S + L+* +S ++ * FH + W*SLSKHI K + G * +*+IE +* V+ VQ E EV +SNV* + M Q+ HDC +C* Subject 4308 CDL*SVS*ENCKPEGRPLRHF**GSTVPSRLY*PLSVNHTK*CFHFSCW*SLSKHI*LPKGSRNTGS*AE*YIEIT*G*VLQVQH*ESEVCESNV*VQTAMSFQEGLHDCSIC* 4649
Grapevine rupestris stem pitting associated virus complete genome, isolate PG, genomic RNA
Sequence ID: HE591388.1 Length: 8725 Number of Matches: 10
Range 1: 3871 to 4650 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
581.6 bits(1263) | 0.0 | 240/260(92%) | 0/260(0%) | Minus/Plus |
Query 4 KIGNGPQSIKVDELRKVKRSALDLLSLNGSKTTYFPSFERAEKLQGCLLGGLTGVISDEKFNDSKPWLAGVSTSDIKQRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKKDLEMDEECKVAKAGKSKKEGWDVVTFEVFLRKVTGLKAGHCVIFDEVQLFPPGYIDLCLLVIRRDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKSYRYNLESRRFINPMFDSRLPCNFKKGSMTAAFAD 783 KIGNGPQSIKVDELRKVKRSALD LS+NGSK TYFPSFERAEKLQGCLLGGLTGVISDEKF+D+KPWL+G+ST+DIK RELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIK DLEMD+ CKVAKAGKSKKEGWDVVTFEVFLRKV GLKAGHCVIFDEVQLFPPGYIDLCLL+IR DAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGK+YRYN+ESRRF+NPMF+SRLPC+FKKGSMTAAFAD Subject 3871 KIGNGPQSIKVDELRKVKRSALDFLSMNGSKITYFPSFERAEKLQGCLLGGLTGVISDEKFSDAKPWLSGISTTDIKPRELTVVLGTFGAGKSFLYKSFMKRSEGKFVTFVSPRRALANSIKNDLEMDDSCKVAKAGKSKKEGWDVVTFEVFLRKVAGLKAGHCVIFDEVQLFPPGYIDLCLLIIRSDAFISLAGDPCQSTYDSQKDRAILGAEQSDILRLLEGKTYRYNIESRRFVNPMFESRLPCHFKKGSMTAAFAD 4650
Range 2: 3873 to 4652 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
461.1 bits(1000) | 0.0 | 207/260(80%) | 0/260(0%) | Plus/Minus |
Query 2 *SANAAVMEPFLKLHGNLESNIGFMNLRLSKLYLYDFPSRSLNMSLCSAPKMALSF*ESYVL*QGSPASEMKASRRITRRHRSM*PGGNS*TSSKITQ*PAFRPVTFLRKTSKVTTSQPSFFDLPAFATLHSSSISRSFLIELARARLGETKVTNFPSDLFMKLLYRKLFPAPNVPSTTVNSLCLMSEVDTPASQGFESLNFSSLITPVRPPSKHP*SFSARSKLGKYVVFDPFRESRSRAERLTFRSSSTFIL*GPLPI 781 *SA AAV+EPFLK HG+L+SNIGF NL LS LYLY PS SL+MSLCSAPK+A SF ESYVL* GSPASEMKAS RI +HRSM PGGN+ TSSKITQ PAF P TFLRKTSKVTTS PSFFDLPA ATL SSISRSFLIE A+ARLGETKVTN PSDLF+KLLY+KLFPAPNVPSTTVNSL L+S VD P SQGF SLNFSSLITPVRPPS+HP +FSARSKLGK V+ DPF E +SRA+RLTFR+SSTF+L*GPLPI Subject 3873 *SAKAAVIEPFLK*HGSLDSNIGFTNLLLSMLYLYVLPSSSLSMSLCSAPKIARSFCESYVL*HGSPASEMKASLRIMSKHRSMYPGGNNWTSSKITQWPAFNPATFLRKTSKVTTSHPSFFDLPALATLQLSSISRSFLIEFAKARLGETKVTNLPSDLFIKLLYKKLFPAPNVPSTTVNSLGLISVVDIPESQGFASLNFSSLITPVRPPSRHPCNFSARSKLGK*VILDPFIERKSRADRLTFRNSSTFML*GPLPI 4652
Range 3: 4300 to 4653 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
149.5 bits(320) | 0.0 | 64/118(54%) | 0/118(0%) | Plus/Minus |
Query 1 LISKRGSHGTFFEVTW*S*IKHWIYEPPALQVVPI*LSFKKSQYVTLFSTQNGSIFLRIVCALTRITS**DESVTANNKET*INVTRGK*LNFIKDHAMTSL*ACNLSKENFEGNNIP 354 +IS+ GSH FEVTW*S* +HW+++PPA V+PI L+ K+S+YVTL S QN I LRI+CALT IT *+ES+T N++ *I+V+R K L+ IK+H + SL +CN S+EN + IP Subject 4300 IISESGSHRALFEVTW*S*FEHWVHKPPAFYVIPIRLALKQSKYVTLLSAQNCPILLRIICALTWITGK*NESITTYNEQA*IDVSRRKQLDLIKNHTVASLQSCNFSEENLKSYYIP 4653
Range 4: 3871 to 4254 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
120.7 bits(257) | 0.0 | 54/128(42%) | 0/128(0%) | Plus/Minus |
Query 400 IHFQVLLD*IG*SPPR*NKSHKFPFRSLHEALV*ETLSSPKCTKYNCQFSLFDVGS*HSSKPRL*IIKFLVTYHTS*TSQQAPLKFFGPLKTWKICCF*PVQGK*VKS*TFNFSQLIHLYTLRPVTNL 783 IHF+++ D*I *S NK ++F R H+ LV ETL SPKCTK++ QF ++ S ++ KPR I + L+TY+ S* Q L+ F PLK W++ F P+ K ++ + + Q IH Y LR +T L Subject 3871 IHFKIIFD*IC*STSGRNKGYEFTLRPFHKTLVQETLPSPKCTKHDSQFPWLNIRSGYTRKPRFCITELLITYNAS*AP*QTSLQLFSPLKAWEVGYFGPIH*KEIEGGSLDLPQFIHFYALRAITYL 4254
Range 5: 4319 to 4651 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
117.0 bits(249) | 0.0 | 61/111(55%) | 0/111(0%) | Minus/Plus |
Query 3 KFSLERLQA*RLVIA*SLMKFSYFPLVTLIYVSLLFAVTLSSH*LVILVKAHTILKKIEPFWVLNKVTY*DFLKESHIGTTWRAGGS*IQCLIQDYHVTSKKVP*LPRLLI 335 +FS E+LQ *RL * LM+ S F L T IY L+ V LS H VI VKAH I K+I FW L++VTY D L+ IG T +AGG * QC QDYHVTSK+ *LP LI Subject 4319 RFSSEKLQD*RLATV*FLMRSSCFLLDTSIYACSLYVVMLSFHLPVIHVKAHMIRKRIGQFWALSRVTYLDCLRARRIGIT*KAGGL*TQCSNQDYHVTSKRAR*LPLSLI 4651
Range 6: 3888 to 4238 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
96.4 bits(204) | 0.0 | 48/117(41%) | 0/117(0%) | Minus/Plus |
Query 416 SKYKGG*AAKS*TFSS*PTFPERVKNNIFSKF*AGRKTSGVLAGRSNWCDK*REI**FKALACWSVNFRHQTKRIDSCTWYIWGWKEFPIQELHEEI*REICDFCFT*AGSSQFNQE 766 S++K G* A+ F E V+NN+ K *AG K + + A NW K* E+ * K LA W +++ + K ID WYIWGW+EF +QE +E++* I + CF+ S+FNQ+ Subject 3888 SEHKSG*IAEGQAIRPRFPFNEWVQNNLLPKL*AG*KVARMSARGPNWRYK**EVQ*CKTLAFWYIHYGY*AKGIDCRAWYIWGWEEFLVQEFYEKV*G*IRNLCFSQTCFSKFNQK 4238
Range 7: 4322 to 4651 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.9 bits(192) | 0.0 | 51/110(46%) | 0/110(0%) | Plus/Minus |
Query 3 DQQTRQSWNLF*SYMVILNQTLDL*TSGSPSCTYMTFLQEVSICHFVQHPKWLYLFENRMCFDKDHQLVR*KRHGE*QGDIDQCNQGEIAELHQRSRNDQPLGL*PF*GK 332 +Q+ RQS + F*S MV+L +TL TS TY + Q V +CH Q PK F N MCFD DH+ V+*K H * ID+C Q E HQ+S + QP L F*GK Subject 4322 NQRKRQSSSPF*SDMVVLIRTLGSQTSCFLCYTYTSCPQAV*VCHSAQRPKLPDPFANHMCFDMDHRQVK*KHHYV**ASIDRCIQEETTGPHQKSHSGQPSILQLF*GK 4651
Range 8: 3872 to 4159 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
68.0 bits(142) | 0.0 | 42/96(44%) | 0/96(0%) | Plus/Minus |
Query 495 CIGNSFQPQMYQVQLSILFV*CRKLTLQQAKALNH*ISRHLSHQLDLPASTPEVFRPAQNLENMLFLTRSGKVGQELNV*LFAAHPPLYFEARYQS 782 C NS QPQMYQ + SI * Q+AK L+H* S HL QL A F+PAQ+L + LF T S K + * A HP L E Y S Subject 3872 CTRNSSQPQMYQARQSIPLA*YP*WIYQKAKVLHH*TSHHL*RQLGPLADILATFQPAQSLGSRLFWTHSLKGNRGRIA*PSAIHPLLCSEGHYLS 4159
Range 9: 4305 to 4640 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
87.7 bits(185) | 0.0 | 51/112(46%) | 0/112(0%) | Minus/Plus |
Query 14 CCYLRSFP*KGYRPKGWSLRDL**SSAISPWLH*SMSPCYSP*RFHLTSW*SLSKHIRFSKR*SHFGC*TK*HIETS*RKVI*VQLGEPEVHKSNV*FKITM*LQKRFHDCR 349 C FP K R +GW L D ** +S W+H SM Y+ * FH T *S+SKHI F+K +FG * +*H T+* + +*V + EV + NV K TM LQK DCR Subject 4305 CSNF*GFPQKSCRIEGWPLCDF**GPVVSSWIHRSMLAHYT**CFHFTCR*SMSKHI*FAKGSGNFGR*AE*HT*TA*GQDV*V*HRKQEVCEPNVRIKTTMSLQKGLDDCR 4640
Range 10: 3872 to 4174 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
63.4 bits(132) | 0.0 | 41/101(41%) | 0/101(0%) | Minus/Plus |
Query 480 RLVTGLKV*RWMSCEKLNVQLLTYFP*TGQKQHIFQVLSGPKNFRGACWEV*LV**VTRNLMIQSLGLLECQLPTSNKEN*QLYLVHLGLERVSYTRAS*R 782 R V L+ *+WM+C + + F * G K Q LSG K+ + C *L *V R+ ++Q+LG L L ++ N* LVHLGL RVS TR *+ Subject 3872 R*VMALRA*KWMNCGRSSDPPSISFQ*MGPK*PTSQALSGLKSCKDVC*GA*LAL*VMRSSVMQNLGFLVYPLRILSQGN*LSCLVHLGLGRVSCTRVL*K 4174
Nucleotide Sequence (498 letters)
Query ID: | ds2016-133_14 |
Query definition: | No definition line |
Query length: | 603 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
275.1 | 1096.9 | 31% | 4.197e-78 | 49% | KR054734.1 | |
298.4 | 1677.0 | 42% | 3.667e-80 | 73% | AY881627.1 | |
296.6 | 1662.4 | 42% | 9.463e-80 | 73% | KX274277.1 | |
275.1 | 1010.5 | 27% | 4.197e-78 | 46% | KX958435.1 | |
277.8 | 1339.8 | 42% | 6.303e-79 | 60% | KR528585.1 |
Alignments
Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome
Sequence ID: KR054734.1 Length: 8753 Number of Matches: 9
Range 1: 5188 to 5532 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
275.1 bits(594) | 0.0 | 112/115(97%) | 0/115(0%) | Minus/Plus |
Query 1 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPPN 345 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYE TQQFFDEHRGG GEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVP N Subject 5188 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLN 5532
Range 2: 5077 to 5139 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.9 bits(83) | 0.0 | 17/21(81%) | 0/21(0%) | Minus/Plus |
Query 394 VWEGKLYGGPWLKVMLFLGQD 456 V E KL G PWLKVMLFLGQD Subject 5077 VREEKLCGDPWLKVMLFLGQD 5139
Range 3: 5187 to 5525 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
220.1 bits(474) | 0.0 | 92/113(81%) | 0/113(0%) | Plus/Minus |
Query 8 GTLERKVSSKNFPYGFARLNFAAST*GLENFRRFRTAMRKVMESFPLCLG*MLSNLSHALLNCSPVPPLCSSKNC*VTSYPQRTSRCSFKAILPTQRALVDSRLLRGM*VLNH 346 GT ++ VSS+NFP GFARL+FAAST G ENF+RFRTA++KVMES PLCLG*MLSNLS ALLNCSP+PPLCSSKNC*V SYPQRTSRCSFKAI PT ALVDSRLL+GM VLNH Subject 5187 GTFDKNVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSNLSQALLNCSPIPPLCSSKNC*VVSYPQRTSRCSFKAIFPTHLALVDSRLLKGMCVLNH 5525
Range 4: 5076 to 5120 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
24.9 bits(48) | 0.0 | 9/15(60%) | 0/15(0%) | Plus/Minus |
Query 413 MTLSHGPPYNFPSHT 457 +TLSHG P++F S T Subject 5076 ITLSHGSPHSFSSLT 5120
Range 5: 5077 to 5532 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
158.2 bits(339) | 0.0 | 77/152(51%) | 0/152(0%) | Plus/Minus |
Query 1 IRWNLRKESV**ELPVWLCAPQFCSFNLRLRKF*TLSDGHEEGYGIIPLMPWVNAFKSFTCVTQLLTGSTPVLIKKLLSYLISTTHLPVFFQGHFTHPAGPCRLQIA*GDVSFKPLFI*AFQFHFLDFTILILT*KKHDFKPWTTI*LPLPY 456 I+WN ++ V + + LCAP CS +L L K *TL D H + GII LM VNAFKSFT + LL + V I++LLS LI THL V FQGHF P+ P LQIA G V F+P FI* + +FTI IL *+KH+FKPW T LP+ Subject 5077 IQWNF*QKCVKQKFSIRLCAP*LCSLHLWL*KL*TLPDSH*KSDGIITLMSRVNAFKSFTSIA*LLAHTPSVFIEELLSCLIPATHLTVLFQGHFPDPSSPG*LQIAQGYVCFEPFFI*TLRLKLFNFTIFILA*EKHNFKPWVTTQFFLPH 5532
Range 6: 5096 to 5506 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
145.9 bits(312) | 0.0 | 70/137(51%) | 0/137(0%) | Plus/Minus |
Query 27 CLVRTSRMALRASILQLQLEA*KILDAFGRP*GRLWNHSPYALGKCFQIFHMRYSIAHRFHPCAHQKIVELPHIHNAPPGVLSRPFYPPSGPLSTPDCLGGCEF*TTLHLSIPIPFPRLHNPHLDLEKA*L*AMDHH 437 C ALRA LQ L A K L+A G+P + WNH PY GKCFQIFH IA + C H++ EL H NAP G LSRPF P P TPDC C F*T LHL+ +LHN H L KA*L*AM HH Subject 5096 CQAEIFHKALRALALQPPLVALKTLNASGQPLKK*WNHYPYV*GKCFQIFHKHCLIARPYPLCVHRRTAELSHTRNAPHGALSRPFSRPI*PWLTPDCSRVCVF*TILHLNTQTQALQLHNLHPGLRKA*L*AMGHH 5506
Range 7: 5081 to 5482 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
128.0 bits(273) | 0.0 | 73/134(54%) | 0/134(0%) | Minus/Plus |
Query 51 GRGSYMVVHGLKSCFF*VKMRIVKSRKWNWNAQMKSGLKLTSP*AIWSRQGPAGWVKWP*KNTGRCVVDMR*LNNFLMSTGVEPVSN*VTHVKDLKAFTQGIRGMIXXXXXXXXXSV*NFLSLKLKLQN*GAQS 452 GR + +V HGLK CF * +M+IVK + + + QMK+G K T P*AIWS+ G G KWP*K+T RCV MR L++ M+T SN* VKDLKAFT IR MIP W S SV*+F S K +LQ+*GAQS Subject 5081 GRKNCVVTHGLKLCFS*ARMKIVKLKSLSLSVQMKNGSKHTYP*AIWSQPGLDGSGKWP*KSTVRCVAGMRQLSSSSMNTEGVWASN*AMLVKDLKAFTLDIRVMIPSLF*WLSGSV*SFQSHKWRLQS*GAQS 5482
Range 8: 5172 to 5507 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
79.0 bits(166) | 0.0 | 55/112(49%) | 0/112(0%) | Minus/Plus |
Query 26 MLK*RVV*NSHPPKQSGVDKGPLGG*NGLERTPGGALWI*GNSTIF**AQGWNR*AIE*RM*KI*KHLPKA*GE*FHNLPHGRPXXXXXXXXXXXXXXIEARKAIREVLTRH 361 + K*R+V N+H +QSGV++G +G NGLER P GAL +* NS + * Q AI+ +*KI*KHLP *G *FH+ +G P+A K+F A+S CK +ARKA+ ++ H Subject 5172 VFK*RMVQNTHTLEQSGVNQG*MGRENGLERAP*GALRV*DNSAVLR*TQRGYGRAIKQCL*KI*KHLP*T*G**FHHFFNGCPEAFKVFKATSGGCKAKARKALWKISA*H 5507
Rupestris stem pitting associated virus strain BS, complete genome
Sequence ID: AY881627.1 Length: 8743 Number of Matches: 9
Range 1: 5188 to 5532 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
277.8 bits(600) | 0.0 | 113/115(98%) | 0/115(0%) | Minus/Plus |
Query 1 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPPN 345 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLD+FLSKVP N Subject 5188 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKVPLN 5532
Range 2: 5077 to 5139 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
45.1 bits(92) | 0.0 | 18/21(86%) | 0/21(0%) | Minus/Plus |
Query 394 VWEGKLYGGPWLKVMLFLGQD 456 V E KLYG PWLKVMLFLGQD Subject 5077 VREEKLYGDPWLKVMLFLGQD 5139
Range 3: 5080 to 5532 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
298.4 bits(645) | 0.0 | 126/151(83%) | 0/151(0%) | Plus/Minus |
Query 1 IRWNLRKESV**ELPVWLCAPQFCSFNLRLRKF*TLSDGHEEGYGIIPLMPWVNAFKSFTCVTQLLTGSTPVLIKKLLSYLISTTHLPVFFQGHFTHPAGPCRLQIA*GDVSFKPLFI*AFQFHFLDFTILILT*KKHDFKPWTTI*LPLP 453 I+W+ R + + *EL +W P F SFNL L KF*T SDGHEEGYGIIPLMPWVNA KSFTCVTQLLTGSTPV IKKLLSY ISTTHLPVFFQGHFTHPAGPCRLQIA*GDVSFKPLFI*AFQFH LDFTILILT*KKHDF+PW TI*L LP Subject 5080 IQWDFR*KRIQ*ELSIWFSPP*FGSFNLGL*KF*TFSDGHEEGYGIIPLMPWVNALKSFTCVTQLLTGSTPVFIKKLLSYFISTTHLPVFFQGHFTHPAGPCRLQIA*GDVSFKPLFI*AFQFHLLDFTILILT*KKHDFQPWITI*LLLP 5532
Range 4: 5096 to 5500 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
287.9 bits(622) | 0.0 | 117/135(87%) | 0/135(0%) | Plus/Minus |
Query 33 VRTSRMALRASILQLQLEA*KILDAFGRP*GRLWNHSPYALGKCFQIFHMRYSIAHRFHPCAHQKIVELPHIHNAPPGVLSRPFYPPSGPLSTPDCLGGCEF*TTLHLSIPIPFPRLHNPHLDLEKA*L*AMDHH 437 +RT M A + QLQ A KILD FGRP*GRLWNHSPYALGKC QIFHMRYSIAHRFHPC HQKIVEL HIHNAPPGVLSRPFYPPSGPLSTPDCLGGCEF*TTLHLSIPIP PRLHNPHLDLEKA*L AMDHH Subject 5096 IRTFHMV*PALVWQLQPGALKILDVFGRP*GRLWNHSPYALGKCSQIFHMRYSIAHRFHPCVHQKIVELLHIHNAPPGVLSRPFYPPSGPLSTPDCLGGCEF*TTLHLSIPIPSPRLHNPHLDLEKA*LSAMDHH 5500
Range 5: 5081 to 5527 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
271.0 bits(585) | 0.0 | 126/149(85%) | 0/149(0%) | Minus/Plus |
Query 6 GRGSYMVVHGLKSCFF*VKMRIVKSRKWNWNAQMKSGLKLTSP*AIWSRQGPAGWVKWP*KNTGRCVVDMR*LNNFLMSTGVEPVSN*VTHVKDLKAFTQGIRGMIXXXXXXXXXSV*NFLSLKLKLQN*GAQSHTGSSY*TLSFLRFH 452 GR SYMV+HG KSCFF*VKMRIVKSR+WNWNAQMKSGLKLTSP*AIWSRQGPAGWVKWP*KNTGRCVVDM+*LNNFLM+TGVEPVSN*VTHVKDL+AFTQGIRGMIP*PSSWPSE+V*NF S +LKL N*G +H SSY L +L+ H Subject 5081 GRRSYMVIHG*KSCFF*VKMRIVKSRRWNWNAQMKSGLKLTSP*AIWSRQGPAGWVKWP*KNTGRCVVDMK*LNNFLMNTGVEPVSN*VTHVKDLRAFTQGIRGMIP*PSSWPSENV*NFQSPRLKLPN*GGLNHMESSYWILFYLKSH 5527
Range 6: 5187 to 5525 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
247.1 bits(533) | 0.0 | 105/113(93%) | 0/113(0%) | Plus/Minus |
Query 8 GTLERKVSSKNFPYGFARLNFAAST*GLENFRRFRTAMRKVMESFPLCLG*MLSNLSHALLNCSPVPPLCSSKNC*VTSYPQRTSRCSFKAILPTQRALVDSRLLRGM*VLNH 346 GTL+RK S+KNFPYG ARL+ AAST G ENFRRFRTAMRKVMESFPLCLG*MLSNLSHALLNCSPVPPLCSSKNC*VTSYPQRTSRCSFKAILPTQRALVDSRLLRGM*VLNH Subject 5187 GTLDRKESNKNFPYGLARLSLAASTWGFENFRRFRTAMRKVMESFPLCLG*MLSNLSHALLNCSPVPPLCSSKNC*VTSYPQRTSRCSFKAILPTQRALVDSRLLRGM*VLNH 5525
Range 7: 5076 to 5120 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
29.5 bits(58) | 0.0 | 11/15(73%) | 0/15(0%) | Plus/Minus |
Query 413 MTLSHGPPYNFPSHT 457 MT SHG PYNF S T Subject 5076 MTFSHGSPYNFSSLT 5120
Range 8: 5166 to 5423 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
188.5 bits(405) | 0.0 | 83/86(97%) | 0/86(0%) | Minus/Plus |
Query 110 IGMLK*RVV*NSHPPKQSGVDKGPLGG*NGLERTPGGALWI*GNSTIF**AQGWNR*AIE*RM*KI*KHLPKA*GE*FHNLPHGRP 367 IGMLK*RVV*NSHPPKQSGVDKGPLGG*NGLERTPGGALWI* NSTIF** QGWNR*AIE*RM*KI*+HLPKA*GE*FHNLPHGRP Subject 5166 IGMLK*RVV*NSHPPKQSGVDKGPLGG*NGLERTPGGALWI*SNSTIF**TQGWNR*AIE*RM*KI*EHLPKA*GE*FHNLPHGRP 5423
Grapevine rupestris stem pitting associated virus isolate SK30, complete genome
Sequence ID: KX274277.1 Length: 8724 Number of Matches: 9
Range 1: 5188 to 5532 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
276.5 bits(597) | 0.0 | 112/115(97%) | 0/115(0%) | Minus/Plus |
Query 1 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPPN 345 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRA+PYGKFLLD+FLSKVP N Subject 5188 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRARPYGKFLLDSFLSKVPLN 5532
Range 2: 5077 to 5139 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
45.1 bits(92) | 0.0 | 18/21(86%) | 0/21(0%) | Minus/Plus |
Query 394 VWEGKLYGGPWLKVMLFLGQD 456 V E KLYG PWLKVMLFLGQD Subject 5077 VREEKLYGDPWLKVMLFLGQD 5139
Range 3: 5083 to 5532 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
296.6 bits(641) | 0.0 | 125/150(83%) | 0/150(0%) | Plus/Minus |
Query 1 IRWNLRKESV**ELPVWLCAPQFCSFNLRLRKF*TLSDGHEEGYGIIPLMPWVNAFKSFTCVTQLLTGSTPVLIKKLLSYLISTTHLPVFFQGHFTHPAGPCRLQIA*GDVSFKPLFI*AFQFHFLDFTILILT*KKHDFKPWTTI*LPL 450 I+W+ R + + *EL +W P F SFNL L KF*TLSDGHEEGYG+IPLMPWVNAFKSFTCVTQLLTGSTPV IKKLLSY ISTTHLPVFFQGHFTHPAGPCRLQIA*GDVSFKPLFI*AFQFH LDFTILILT*+KHDF+PW TI*L L Subject 5083 IQWDFR*KRIQ*ELSIWSSPP*FGSFNLGL*KF*TLSDGHEEGYGVIPLMPWVNAFKSFTCVTQLLTGSTPVFIKKLLSYFISTTHLPVFFQGHFTHPAGPCRLQIA*GDVSFKPLFI*AFQFHLLDFTILILT*EKHDFQPWITI*LLL 5532
Range 4: 5096 to 5500 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
287.9 bits(622) | 0.0 | 117/135(87%) | 0/135(0%) | Plus/Minus |
Query 33 VRTSRMALRASILQLQLEA*KILDAFGRP*GRLWNHSPYALGKCFQIFHMRYSIAHRFHPCAHQKIVELPHIHNAPPGVLSRPFYPPSGPLSTPDCLGGCEF*TTLHLSIPIPFPRLHNPHLDLEKA*L*AMDHH 437 +RT M A + QLQ A KILDAFGRP*GRLW+HSPYALGKCFQIFHMRYSIAHRFHPC HQKIVEL HIHNAPPGVLSRPFYPPSGPLSTPDCLGGCEF*TTLHLSIPIP PRLHNPHLDL KA*L AMDHH Subject 5096 IRTFHMV*PALVWQLQPGALKILDAFGRP*GRLWSHSPYALGKCFQIFHMRYSIAHRFHPCVHQKIVELLHIHNAPPGVLSRPFYPPSGPLSTPDCLGGCEF*TTLHLSIPIPSPRLHNPHLDLGKA*LSAMDHH 5500
Range 5: 5084 to 5527 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
263.2 bits(568) | 0.0 | 125/148(84%) | 0/148(0%) | Minus/Plus |
Query 6 RGSYMVVHGLKSCFF*VKMRIVKSRKWNWNAQMKSGLKLTSP*AIWSRQGPAGWVKWP*KNTGRCVVDMR*LNNFLMSTGVEPVSN*VTHVKDLKAFTQGIRGMIXXXXXXXXXSV*NFLSLKLKLQN*GAQSHTGSSY*TLSFLRFH 449 R SYMV+HG KSCF *VKMRIVKSR+WNWNAQMKSGLKLTSP*AIWSRQGPAGWVKWP*KNTGRCVVDM+*LNNFLM+TGVEPVSN*VTHVKDLKAFTQGIRGM P*PSSWPSESV*NF S +LKL N*G H SSY L +L+ H Subject 5084 RRSYMVIHG*KSCFS*VKMRIVKSRRWNWNAQMKSGLKLTSP*AIWSRQGPAGWVKWP*KNTGRCVVDMK*LNNFLMNTGVEPVSN*VTHVKDLKAFTQGIRGMTP*PSSWPSESV*NFQSPRLKLPN*GGLDHMESSYWILFYLKSH 5527
Range 6: 5187 to 5525 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
247.1 bits(533) | 0.0 | 105/113(93%) | 0/113(0%) | Plus/Minus |
Query 8 GTLERKVSSKNFPYGFARLNFAAST*GLENFRRFRTAMRKVMESFPLCLG*MLSNLSHALLNCSPVPPLCSSKNC*VTSYPQRTSRCSFKAILPTQRALVDSRLLRGM*VLNH 346 GTL+RK S+KNFPYG ARL+ AAST G ENFRRFRTAMRKVMESFPLCLG*MLSNLSHALLNCSPVPPLCSSKNC*VTSYPQRTSRCSFKAILPTQRALVDSRLLRGM*VLNH Subject 5187 GTLDRKESNKNFPYGLARLSLAASTWGFENFRRFRTAMRKVMESFPLCLG*MLSNLSHALLNCSPVPPLCSSKNC*VTSYPQRTSRCSFKAILPTQRALVDSRLLRGM*VLNH 5525
Range 7: 5076 to 5120 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
29.5 bits(58) | 0.0 | 11/15(73%) | 0/15(0%) | Plus/Minus |
Query 413 MTLSHGPPYNFPSHT 457 MT SHG PYNF S T Subject 5076 MTFSHGSPYNFSSLT 5120
Range 8: 5166 to 5423 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
187.6 bits(403) | 0.0 | 83/86(97%) | 0/86(0%) | Minus/Plus |
Query 110 IGMLK*RVV*NSHPPKQSGVDKGPLGG*NGLERTPGGALWI*GNSTIF**AQGWNR*AIE*RM*KI*KHLPKA*GE*FHNLPHGRP 367 IGMLK*RVV*NSHPPKQSGVDKGPLGG*NGLERTPGGALWI* NSTIF** QGWNR*AIE*RM*KI*KHLPKA*GE* HNLPHGRP Subject 5166 IGMLK*RVV*NSHPPKQSGVDKGPLGG*NGLERTPGGALWI*SNSTIF**TQGWNR*AIE*RM*KI*KHLPKA*GE*LHNLPHGRP 5423
Grapevine rupestris stem pitting associated virus isolate CS BR, complete genome
Sequence ID: KX958435.1 Length: 8743 Number of Matches: 7
Range 1: 5189 to 5533 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
275.1 bits(594) | 0.0 | 112/115(97%) | 0/115(0%) | Minus/Plus |
Query 1 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPPN 345 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYE TQQFFDEHRGG GEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVP N Subject 5189 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLN 5533
Range 2: 5078 to 5140 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.9 bits(83) | 0.0 | 17/21(81%) | 0/21(0%) | Minus/Plus |
Query 394 VWEGKLYGGPWLKVMLFLGQD 456 V E KL G PWLKVMLFLGQD Subject 5078 VREEKLCGDPWLKVMLFLGQD 5140
Range 3: 5188 to 5526 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
216.0 bits(465) | 0.0 | 91/113(81%) | 0/113(0%) | Plus/Minus |
Query 8 GTLERKVSSKNFPYGFARLNFAAST*GLENFRRFRTAMRKVMESFPLCLG*MLSNLSHALLNCSPVPPLCSSKNC*VTSYPQRTSRCSFKAILPTQRALVDSRLLRGM*VLNH 346 GT +RKVSS+NFP GFARL+FAAST G ENFRRFRTA++KVMES PLCLG*MLS S ALLNCSP+PPLCSSKNC*V SYP RTSRCSFKAI PT ALVDS+LL+GM VLNH Subject 5188 GTFDRKVSSRNFP*GFARLSFAASTCGFENFRRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPIPPLCSSKNC*VVSYPHRTSRCSFKAIFPTHLALVDSKLLKGMCVLNH 5526
Range 4: 5078 to 5527 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
147.2 bits(315) | 0.0 | 73/150(49%) | 0/150(0%) | Plus/Minus |
Query 7 WNLRKESV**ELPVWLCAPQFCSFNLRLRKF*TLSDGHEEGYGIIPLMPWVNAFKSFTCVTQLLTGSTPVLIKKLLSYLISTTHLPVFFQGHFTHPAGPCRLQIA*GDVSFKPLFI*AFQFHFLDFTILILT*KKHDFKPWTTI*LPLPY 456 W+ R ESV E P+ LC P SF+L L K SDGH +G G+I L+ +NAFK+FT + LL S PV I++LLS I T++L V QGHF +P+ P LQIA G V F+P FI* + +FT+LIL *+KH+F P T L L Y Subject 5078 WDFR*ESVKQEFPIRLCTP*LRSFHLWL*KLQAFSDGH*KGNGVIALVSRINAFKTFTGIA*LLAHSPPVFIEELLSCFIPTSYLTVLLQGHFPNPSSPG*LQIAQGYVCFEPFFI*TLRLKLFNFTVLILA*EKHNF*PRITTQLFLSY 5527
Range 5: 5097 to 5513 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
133.5 bits(285) | 0.0 | 66/139(47%) | 0/139(0%) | Plus/Minus |
Query 21 GKCLVRTSRMALRASILQLQLEA*KILDAFGRP*GRLWNHSPYALGKCFQIFHMRYSIAHRFHPCAHQKIVELPHIHNAPPGVLSRPFYPPSGPLSTPDCLGGCEF*TTLHLSIPIPFPRLHNPHLDLEKA*L*AMDHH 437 GKC S AL A QL A K FGRP R W+H P KCFQ H IA F PC H++I EL H H P G SRPF P P TP+C C F*T LHL+ +LH+PH L KA*L A DHH Subject 5097 GKCQAGISHKALHALASQLPPVALKTSGVFGRPLKR*WSHCPCV*DKCFQNVHRHCLIARPFPPCVHRRIAELFHTHIVPHGAPSRPFSQPI*PWLTPNCSRVCVF*TILHLNTQTQALQLHSPHPGLRKA*LLATDHH 5513
Range 6: 5079 to 5528 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
115.6 bits(246) | 0.0 | 72/150(48%) | 0/150(0%) | Minus/Plus |
Query 6 YGRGSYMVVHGLKSCFF*VKMRIVKSRKWNWNAQMKSGLKLTSP*AIWSRQGPAGWVKWP*KNTGRCVVDMR*LNNFLMSTGVEPVSN*VTHVKDLKAFTQGIRGMIXXXXXXXXXSV*NFLSLKLKLQN*GAQSHTGSSY*TLSFLRFH 455 Y R S +V+ G K CF * +MR VK + + + QMK+G K T P*AIWS+ G G KWP*++T R V M+ L+N M+TG E SN* V LKAF R M P P WPSE+ *+F S + KL++*G QS G+S TLS+ + H Subject 5079 YERKSCVVIRG*KLCFS*ARMRTVKLKSLSLSVQMKNGSKHTYP*AIWSQPGLDGLGKWP*RSTVRYDVGMKQLSNSSMNTGGEWASN*AMPVNVLKAFILDTRAMTPLPF*WPSENA*SFQSHRWKLRS*GVQSLMGNSCLTLSYRKSH 5528
Range 7: 5173 to 5514 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
82.2 bits(173) | 0.0 | 52/114(46%) | 0/114(0%) | Minus/Plus |
Query 20 MLK*RVV*NSHPPKQSGVDKGPLGG*NGLERTPGGALWI*GNSTIF**AQGWNR*AIE*RM*KI*KHLPKA*GE*FHNLPHGRPXXXXXXXXXXXXXXIEARKAIREVLTRHFP 361 + K*R+V N+H +Q GV++G +G NGLE P G +W+* NS I * QG N AI+ +* *KHL G+* H L +GRPK ++F A+ SC+ +A KA+ E+ HFP Subject 5173 VFK*RMVQNTHTLEQFGVNQG*MGWENGLEGAP*GTMWV*NNSAILR*TQGGNGRAIKQCL*TF*KHLS*TQGQ*LHYLFNGRPKTPEVFKATGGSCEAKACKALWEIPA*HFP 5514
Grapevine rupestris stem pitting associated virus isolate Tannat Rspav1, complete genome
Sequence ID: KR528585.1 Length: 8595 Number of Matches: 9
Range 1: 5170 to 5514 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
277.8 bits(600) | 0.0 | 113/115(98%) | 0/115(0%) | Minus/Plus |
Query 1 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPPN 345 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLD+FLSKVP N Subject 5170 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYEVTQQFFDEHRGGTGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKVPLN 5514
Range 2: 5059 to 5121 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
40.9 bits(83) | 0.0 | 17/21(81%) | 0/21(0%) | Minus/Plus |
Query 394 VWEGKLYGGPWLKVMLFLGQD 456 V E KL G PWLKVMLFLGQD Subject 5059 VREEKLCGDPWLKVMLFLGQD 5121
Range 3: 5062 to 5508 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
233.4 bits(503) | 0.0 | 100/149(67%) | 0/149(0%) | Plus/Minus |
Query 7 WNLRKESV**ELPVWLCAPQFCSFNLRLRKF*TLSDGHEEGYGIIPLMPWVNAFKSFTCVTQLLTGSTPVLIKKLLSYLISTTHLPVFFQGHFTHPAGPCRLQIA*GDVSFKPLFI*AFQFHFLDFTILILT*KKHDFKPWTTI*LPLP 453 W+ R++ V**ELP+WL P F SFNL LRKF TLSD H+EGY II MPWVNAFK TC+ QLLT ST +LIK+LLS+ I+TTHLP+ FQGHFTHP GP LQI GDV FKP FI*AF H +FTILILT +KHDF PW T L LP Subject 5062 WDFRQKGV**ELPIWLGPP*FGSFNLGLRKFETLSDSHKEGY*IISFMPWVNAFKPLTCIAQLLTSSTSMLIKELLSHFITTTHLPMLFQGHFTHPPGPG*LQITQGDVGFKPFFI*AF*LHLFNFTILILTQEKHDF*PWVTTQLLLP 5508
Range 4: 5169 to 5507 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
221.5 bits(477) | 0.0 | 95/113(84%) | 0/113(0%) | Plus/Minus |
Query 8 GTLERKVSSKNFPYGFARLNFAAST*GLENFRRFRTAMRKVMESFPLCLG*MLSNLSHALLNCSPVPPLCSSKNC*VTSYPQRTSRCSFKAILPTQRALVDSRLLRGM*VLNH 346 GTL+RK S++NFPYG AR + AAST G EN RRFRTA+RKV+ESFPLCLG*MLSNLSHALL+CSPVPPLCSSKNC*VTS PQRTSRCSFKAILPT ALVDSRLLRGM VLNH Subject 5169 GTLDRKESNRNFPYGLARRSLAASTWGFENLRRFRTAIRKVIESFPLCLG*MLSNLSHALLSCSPVPPLCSSKNC*VTS*PQRTSRCSFKAILPTHLALVDSRLLRGMWVLNH 5507
Range 5: 5058 to 5102 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
25.8 bits(50) | 0.0 | 9/15(60%) | 0/15(0%) | Plus/Minus |
Query 413 MTLSHGPPYNFPSHT 457 MT +HG P+NF S T Subject 5058 MTFNHGSPHNFSSLT 5102
Range 6: 5063 to 5509 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
197.6 bits(425) | 0.0 | 100/149(67%) | 0/149(0%) | Minus/Plus |
Query 6 GRGSYMVVHGLKSCFF*VKMRIVKSRKWNWNAQMKSGLKLTSP*AIWSRQGPAGWVKWP*KNTGRCVVDMR*LNNFLMSTGVEPVSN*VTHVKDLKAFTQGIRGMIXXXXXXXXXSV*NFLSLKLKLQN*GAQSHTGSSY*TLSFLRFH 452 GR S +V HG KSCF VKMRIVK ++W+ NAQMK+GLK TSP* IWS+ GP GWVKWP*K+ GRCVV M+*LNN LMS VE VSN* HV+ LKAFTQGI+ MI *PS W SESV NF S +LKL N G SH GSSY*T L+ H Subject 5063 GRRSCVVTHG*KSCFSWVKMRIVKLKRWSQNAQMKNGLKPTSP*VIWSQPGPGGWVKWP*KSIGRCVVVMK*LNNSLMSIEVELVSN*AMHVRGLKAFTQGIKEMIQ*PSLWLSESVSNFRSPRLKLPNYGGPSHMGSSY*TPFCLKSH 5509
Range 7: 5078 to 5491 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
195.3 bits(420) | 0.0 | 88/138(64%) | 0/138(0%) | Plus/Minus |
Query 24 KCLVRTSRMALRASILQLQLEA*KILDAFGRP*GRLWNHSPYALGKCFQIFHMRYSIAHRFHPCAHQKIVELPHIHNAPPGVLSRPFYPPSGPLSTPDCLGGCEF*TTLHLSIPIPFPRLHNPHLDLEKA*L*AMDHH 437 + L+ TS MA A + QLQ A KI DAFG+P*GRL NH YALGKCFQ HM S+AH+FH AHQ+IVE H HNAPP LSRPFYPP+ P TPD GGC F*T LHLSI P +LHNPHLD KA*L M HH Subject 5078 RSLIGTSHMAWPAVVWQLQPGASKI*DAFGQP*GRLLNHFLYALGKCFQTSHMHCSVAHQFHLYAHQRIVESLHNHNAPPDALSRPFYPPTWPWLTPDYSGGCGF*TILHLSILTPSLQLHNPHLDPGKA*LLTMGHH 5491
Range 8: 5148 to 5405 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
120.2 bits(256) | 0.0 | 57/86(66%) | 0/86(0%) | Minus/Plus |
Query 110 IGMLK*RVV*NSHPPKQSGVDKGPLGG*NGLERTPGGALWI*GNSTIF**AQGWNR*AIE*RM*KI*KHLPKA*GE*FHNLPHGRP 367 + MLK*R+V*N HPP+ SGV++G +GG*NGLER GGALW+* +STI **A WN *A E M*++*KHLPKA* +*F+NLP+G P Subject 5148 VRMLK*RMV*NPHPPE*SGVNQGQVGG*NGLERASGGALWL*SDSTIL**A*RWNW*ATEQCM*EV*KHLPKA*RK*FNNLPYGCP 5405
Nucleotide Sequence (986 letters)
Query ID: | ds2016-133_14 |
Query definition: | No definition line |
Query length: | 603 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
671.4 | 3754.2 | 30% | 0 | 93% | KX274274.1 | |
554.6 | 2729.4 | 29% | 7.838e-156 | 61% | KR054734.1 | |
610.9 | 3120.8 | 23% | 8.477e-173 | 68% | KT948710.1 | |
440.5 | 1257.5 | 16% | 1.737e-121 | 37% | KR054735.1 | |
500.1 | 1909.0 | 34% | 2.034e-139 | 41% | AY368172.2 |
Alignments
Grapevine rupestris stem pitting associated virus isolate SK704 A, complete genome
Sequence ID: KX274274.1 Length: 8725 Number of Matches: 7
Range 1: 1174 to 2064 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
671.4 bits(1459) | 0.0 | 292/297(98%) | 0/297(0%) | Plus/Plus |
Query 2 ISCGRSGSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGNAHFNRQRAPYSLGISHWLNSPFSVEHKFAGAINHQILHVALSLVPLSNDPFFKLTPREVDSALSSVRMALGITGQSKLFGFLVNDTLINEMQRRYKLRLAKHLKSLTWYFHFCGCQWXXXXXXXXXXXXGDRKTSFADLDCNVAQIYRLVSAQVTAPGVLLGLTKVYARYSNPQQQLNSLNVLEGKSCKSVQPSDTYSGET 892 ISCGRSGSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGN HFNRQRAPYSLGISHWLNSPFSVEHKFAGAINHQILHVALSLVPLSNDPFFKLTPREVDSALSSVRMALGITGQSKLFGFLVNDTLINEMQRRYKLRLAKHLKSLTWYFHFCGCQWFLLNRRVNL+FLGDRK+SFADLDCNVAQIYRLVSAQVTAPGVLLGLTKVYA YSNPQQQLNSLNVLEGKSCK+VQPSDTYSGET Subject 1174 ISCGRSGSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGNVHFNRQRAPYSLGISHWLNSPFSVEHKFAGAINHQILHVALSLVPLSNDPFFKLTPREVDSALSSVRMALGITGQSKLFGFLVNDTLINEMQRRYKLRLAKHLKSLTWYFHFCGCQWFLLNRRVNLKFLGDRKSSFADLDCNVAQIYRLVSAQVTAPGVLLGLTKVYAHYSNPQQQLNSLNVLEGKSCKTVQPSDTYSGET 2064
Range 2: 1173 to 2063 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
641.2 bits(1393) | 0.0 | 291/297(98%) | 0/297(0%) | Minus/Minus |
Query 1 VSPEYVSEGCTDLHDLPSRTFKELSCC*GLE*RA*TLVKPNKTPGAVT*AETKR*I*ATLQSRSAKEVFRSPRNLRLTLRFKRNH*QPQKWKYQVSDFKCLASLNLYLLCISFMRVSFTKKPKSLDCPVIPRAILTLERAESTSLGVSLKKGSFDKGTKDRATCRIWWLMAPANLCSTENGELSQCDIPSEYGAL*RLKCALPSPNHELXXXXXXXXXXXSLRQENKNRCSKKSGVTSIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREPLRPQLI 891 VSPEYVSEGCT LHDLPSRTFKELSCC*GLE* A*TLVKPNKTPGAVT*AETKR*I*ATLQSRSAKE FRSPRNLRLTLRFKRNH*QPQKWKYQVSDFKCLASLNLYLLCIS MRVSFTKKPKSLDCPVIPRAILTLERAESTSLGVSLKKGSFDKGTKDRATCRIWWLMAPANLCSTENGELSQCDIPSEYGAL*RLKC LPSPNHELSITSS+SSSISSLRQENKNRCSKKSGVTSIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREPLRPQLI Subject 1173 VSPEYVSEGCTVLHDLPSRTFKELSCC*GLE**A*TLVKPNKTPGAVT*AETKR*I*ATLQSRSAKEDFRSPRNLRLTLRFKRNH*QPQKWKYQVSDFKCLASLNLYLLCISLMRVSFTKKPKSLDCPVIPRAILTLERAESTSLGVSLKKGSFDKGTKDRATCRIWWLMAPANLCSTENGELSQCDIPSEYGAL*RLKCTLPSPNHELSITSSISSSISSLRQENKNRCSKKSGVTSIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREPLRPQLI 2063
Range 3: 1175 to 2059 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
638.9 bits(1388) | 0.0 | 277/295(94%) | 0/295(0%) | Minus/Minus |
Query 3 LQSMCRRAARIYMTCLPEHLRS*VVVEDWSNEHRP*SNPTRLQGL*PELKPNDKFEQHYNQGQQKRSFDRQEI*G*LFDSRETIDNHKNGNTK*VISSAWQVSTYTFSAFHL*GYHSLKSQKV*IAL*SQEPFLHLKEQNQPP*ELA*KRDHLTKGPRTEQHAEFGG*WHLQTYAQQRMES*ASAISLVNMEPSDD*SAHCQVQTMNYP*PPQCPLQSAH*GRRIKIGAQRNQGSHLSS*LKN*KAQERRQTSQVKFRGNLKTTWPRH*ASSDTKMISPALKYWASIGNHSAHN* 887 LQSMCRRAAR YMTCLPEHLRS*VVVE WSNEHRP S+PTRLQGL*PELKPNDKFEQHYNQGQQ+R+FDRQEI*G*LFDSRETIDNHKNGNTK*VISSAWQVSTYTFSAFH *GYHSLKSQKV*IAL*SQEPFLHLKEQNQ P*ELA*K+DHLTKGPRTEQHAEFGG*WHLQTYAQQRM S*AS ISLVNMEPSD *SAHCQVQTMNYP*PPQ PLQSAH*GRRIKIGAQRNQGSHLSS* KN*K QERRQ SQVKFRGNLK WPRH*ASSDTKMISPALKYWASIGNHSAHN* Subject 1175 LQSMCRRAARFYMTCLPEHLRS*VVVEGWSNEHRPWSSPTRLQGL*PELKPNDKFEQHYNQGQQRRTFDRQEI*G*LFDSRETIDNHKNGNTK*VISSAWQVSTYTFSAFH**GYHSLKSQKV*IAL*SQEPFLHLKEQNQLP*ELA*KKDHLTKGPRTEQHAEFGG*WHLQTYAQQRMGS*ASVISLVNMEPSDG*SAHCQVQTMNYP*PPQYPLQSAH*GRRIKIGAQRNQGSHLSS*PKN*KVQERRQMSQVKFRGNLKIIWPRH*ASSDTKMISPALKYWASIGNHSAHN* 2059
Range 4: 1174 to 2064 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
617.4 bits(1341) | 0.0 | 277/297(93%) | 0/297(0%) | Minus/Minus |
Query 2 GFSRVCVGGLHGFT*LAFQNI*GVELLLRIGVTSIDLSQTQQDSRGCDLS*NQTINLSNITIKVSKRGLSIAKKSEVNSSIQEKPLTTTKMEIPSK*FQVLGKSQLIPSLHFIYEGIIH*KAKKFRLPCDPKSHSYT*KSRINLPRS*LKKGII*QRDQGQSNMQNLVVDGTCKLMLNREWRVKPVRYP**IWSPLTIKVRIAKSKP*TIHNLLNVLFNQLIEAGE*K*VLKEIRGHIYQVN*KIERLKSVDKRVK*SFAET*RQPGQGIRHHPTQK*YHQL*NIGHQ*GTTPPTTN 892 G SRVCVGGLHGFT*LAFQNI*GVELLLR+GV SIDL Q QQDSRGCDLS*NQTINLSNITIKVSK GLSIAKK EVNSSIQEKPLTTTKMEIPSK*FQVLGKSQLIPSLHFI EGIIH*KAKKFRLPCDPKSHSYT*KSRIN PRS*LKK II*QRDQGQSNMQNLVVDGTCKLMLNREW VKPV YP**IWSPLT+KV IAKSKP*TIHNLLN+LFNQLIEAGE*K*VLKEIRGHIYQVN KIER KSVDK VK*SFAET*R GQGIRHHPTQK*YHQL*NIGHQ*GTTPPTTN Subject 1174 GLSRVCVGGLHGFT*LAFQNI*GVELLLRVGVMSIDLGQAQQDSRGCDLS*NQTINLSNITIKVSKGGLSIAKKFEVNSSIQEKPLTTTKMEIPSK*FQVLGKSQLIPSLHFINEGIIH*KAKKFRLPCDPKSHSYT*KSRINFPRS*LKKRII*QRDQGQSNMQNLVVDGTCKLMLNREWGVKPV*YP**IWSPLTVKVHIAKSKP*TIHNLLNILFNQLIEAGE*K*VLKEIRGHIYQVNRKIERFKSVDK*VK*SFAET*R*SGQGIRHHPTQK*YHQL*NIGHQ*GTTPPTTN 2064
Range 5: 1539 to 2069 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
360.8 bits(781) | 0.0 | 166/177(94%) | 0/177(0%) | Plus/Plus |
Query 367 *VCRCHQPPNSACCSVLGPFVK*SLF*ANS*GG*FCSFKCKNGSWDHRAI*TFWLFSE*YPHK*NAEKV*VETCQALEITYLVFPFLWLSMVSLESKS*PQISWRSKDLFC*P*L*CCSNLSFGFSSGHSPWSLVGFD*GLCXXXXXXXXXXXXKCSGRQVM*IRAALRHILWRNHS 897 *VCRCHQPPNSACCSVLGPFVK*S F*ANS*G *FCSFKCKNGSWDHRAI*TFWLFSE*YPH *NAEKV*VETCQALEITYLVFPFLWLSMVSLESKS*PQISWRSK L C*P*L*CCSNLSFGFSSGHSPWSLVG D GLCSLLQ STTTQLLKCSGRQVM* RAALRHILWR+ S Subject 1539 *VCRCHQPPNSACCSVLGPFVK*SFF*ANS*GS*FCSFKCKNGSWDHRAI*TFWLFSE*YPH**NAEKV*VETCQALEITYLVFPFLWLSMVSLESKS*PQISWRSKVLLC*P*L*CCSNLSFGFSSGHSPWSLVGLDQGLCSLLQPSTTTQLLKCSGRQVM*NRAALRHILWRDPS 2069
Range 6: 1173 to 1502 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
247.1 bits(533) | 0.0 | 103/110(94%) | 0/110(0%) | Plus/Plus |
Query 1 D*LWAEWFPIDAQYFKAGDIIFVSDDA*CLGQVVFKFPRNFT*LVCLRS*AFQFFS*LDRCDP*FL*APIFILLPQ*AD*RGH*GGYG*FMVWTWQCAL*SSEGSIFTRD 330 D*LWAEWFPIDAQYFKAGDIIFVSDDA*CLGQ++FKFPRNFT*L+CLRS* FQFF *LDRCDP*FL*APIFILLPQ*AD*RG+*GGYG*FMVWTWQCAL* SEGSIFTRD Subject 1173 D*LWAEWFPIDAQYFKAGDIIFVSDDA*CLGQIIFKFPRNFT*LICLRS*TFQFFG*LDRCDP*FL*APIFILLPQ*AD*RGY*GGYG*FMVWTWQCAL*PSEGSIFTRD 1502
Range 7: 1175 to 2068 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
577.5 bits(1254) | 0.0 | 276/298(93%) | 0/298(0%) | Plus/Plus |
Query 3 LVVGGVVPY*CPIFQSW*YHFCVG*CLMPWPGCLQVSAKXXXXXXXXXXXXXIFQLT**M*PLISLSTYFYSPASMS*LKRTLRRLWIVHGLDLAMRTLIVRGLHIH*GYRTGLTLHSLLSISLQVPSTTKFCMLLCPWSLCQMIPFXXXXXXXXXXXFQV*EWLLGSQGNLNFLAF**MIPS*MKCREGIS*DLPST*NHLLGISIFVVVNGFS*IEELTSDFLAIERPLLLTLIVMLLKFIVWFQLRSQPLESCWV*LRSMLVTPILNNNSTP*MFWKASHVNPCSPPTHTLEKPQ 896 LVVGGVVPY*CPIFQSW*YHFCVG*CLMPWP LQVSAKLHLT LSTLL+LSIF+LT**M*PLISLSTYFYSPASMS*LKR LRRLWIVHGLDLAM TL VRGLHIH*GY TGLT HSLLSISLQVPSTTKFCMLLCPWSLCQMI FLS*LLG+LILLFQV*EWLLGSQGNLNFLAF**MIPS MKCREGIS*DLPST*NHLLGISIFVVVNGFS*IEELTS+FLAIE P LLTLIVMLLKFIVWFQLRSQPLESCW * RSML+TP LNNNSTP*MFWKASHV PCSPPTHTLE+PQ Subject 1175 LVVGGVVPY*CPIFQSW*YHFCVG*CLMPWPDYLQVSAKLHLTHLSTLLNLSIFRLT**M*PLISLSTYFYSPASMS*LKRILRRLWIVHGLDLAMCTLTVRGLHIH*GYHTGLTPHSLLSISLQVPSTTKFCMLLCPWSLCQMILFLS*LLGKLILLFQV*EWLLGSQGNLNFLAF**MIPSLMKCREGIS*DLPST*NHLLGISIFVVVNGFS*IEELTSNFLAIESPPLLTLIVMLLKFIVWFQLRSQPLESCWA*PRSMLITPTLNNNSTP*MFWKASHVKPCSPPTHTLERPQ 2068
Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome
Sequence ID: KR054734.1 Length: 8753 Number of Matches: 8
Range 1: 1174 to 2064 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
554.6 bits(1204) | 0.0 | 243/297(82%) | 0/297(0%) | Plus/Plus |
Query 2 ISCGRSGSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGNAHFNRQRAPYSLGISHWLNSPFSVEHKFAGAINHQILHVALSLVPLSNDPFFKLTPREVDSALSSVRMALGITGQSKLFGFLVNDTLINEMQRRYKLRLAKHLKSLTWYFHFCGCQWXXXXXXXXXXXXGDRKTSFADLDCNVAQIYRLVSAQVTAPGVLLGLTKVYARYSNPQQQLNSLNVLEGKSCKSVQPSDTYSGET 892 ISCGRSGSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFV+ALEPFNFSVNLID+TPDFFEHLFLFSCLNELI EDIEE MD SWFGLGN HFNRQRAPYSLG+SHW+ SPFSVEHKFAG IN QIL+VALSLVPLS+DP FKLT REVDSALSSVR ALG+TGQSKLFGFLVN+TL NE+QR YKLRLA+HLKSLTW FHFCGCQWFLL RR+NL+FL DRK+SFAD DC VA+IY LV+AQ AP VL GLTKVY+ SN QQ+L S N+LEG C+SVQ + + GET Subject 1174 ISCGRSGSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVHALEPFNFSVNLIDITPDFFEHLFLFSCLNELIAEDIEEAMDGSWFGLGNLHFNRQRAPYSLGVSHWIKSPFSVEHKFAGVINRQILYVALSLVPLSDDPSFKLTSREVDSALSSVRKALGVTGQSKLFGFLVNNTLTNEVQRGYKLRLAQHLKSLTWLFHFCGCQWFLLCRRINLKFLSDRKSSFADPDCGVAKIYSLVTAQAIAPEVLSGLTKVYSFGSNSQQKLISSNILEGNLCESVQSPNAHFGET 2064
Range 2: 1173 to 2063 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
500.5 bits(1086) | 0.0 | 239/297(80%) | 0/297(0%) | Minus/Minus |
Query 1 VSPEYVSEGCTDLHDLPSRTFKELSCC*GLE*RA*TLVKPNKTPGAVT*AETKR*I*ATLQSRSAKEVFRSPRNLRLTLRFKRNH*QPQKWKYQVSDFKCLASLNLYLLCISFMRVSFTKKPKSLDCPVIPRAILTLERAESTSLGVSLKKGSFDKGTKDRATCRIWWLMAPANLCSTENGELSQCDIPSEYGAL*RLKCALPSPNHELXXXXXXXXXXXSLRQENKNRCSKKSGVTSIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREPLRPQLI 891 VSP+ CTD H LPSR F+E+S C* LE + *TLVKP+KT GA+ *A TK *I AT QS SAKE FRS RNLRL LR +RNH*QPQK K QVSDFKC ASLNLY LC SF+RV FTKKPKS DCPV PRA LTLERAESTSL V+LK+GS D GTKDRAT RIW LM PANLCSTENG+L QCD P EYGAL*RLKC LPSPNHE SI SS+SS+ISSLRQENKNRCSKKSGV SIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREPLRPQLI Subject 1173 VSPKCALGDCTDSHKLPSRIFEEMSFC*ELEPKE*TLVKPDKTSGAMA*AVTKL*ILATPQSGSAKEDFRSLRNLRLILRHRRNH*QPQK*KSQVSDFKC*ASLNLYPLCTSFVRVLFTKKPKSFDCPVTPRAFLTLERAESTSLEVNLKEGSSDNGTKDRATYRIWRLMTPANLCSTENGDLIQCDTPREYGAL*RLKCKLPSPNHEPSIASSISSAISSLRQENKNRCSKKSGVISIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREPLRPQLI 2063
Range 3: 1174 to 2064 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
451.5 bits(979) | 0.0 | 212/297(71%) | 0/297(0%) | Minus/Minus |
Query 2 GFSRVCVGGLHGFT*LAFQNI*GVELLLRIGVTSIDLSQTQQDSRGCDLS*NQTINLSNITIKVSKRGLSIAKKSEVNSSIQEKPLTTTKMEIPSK*FQVLGKSQLIPSLHFIYEGIIH*KAKKFRLPCDPKSHSYT*KSRINLPRS*LKKGII*QRDQGQSNMQNLVVDGTCKLMLNREWRVKPVRYP**IWSPLTIKVRIAKSKP*TIHNLLNVLFNQLIEAGE*K*VLKEIRGHIYQVN*KIERLKSVDKRVK*SFAET*RQPGQGIRHHPTQK*YHQL*NIGHQ*GTTPPTTN 892 GFS+VCVGGLH FT + F+NI* ELLLRIG IDLS Q+ RG LS NQTI+ SN TI+VSK GLSI K +V+SS Q+KPLTTT+M+ PSK*FQVL K LIPSLH I E +IH*+AKK LPC+PKS SYT*KS IN PRS LK+ II*Q DQGQSN+QNL V+ TCKL+LNREWR PV +P* IW PLT+KV+IAKSKP* +H+ LN+L NQLIEAGE K*+LKEIRG+I QVN K+ERLKS++K VK*SFAET*RQPG GIRHH TQK*YHQL*NI HQ* TTPPTT+ Subject 1174 GFSKVCVGGLH*FTQITFKNI*RDELLLRIGAKRIDLS*A*QNLRGDGLSCNQTIDFSNTTIRVSKGGLSIT*KFKVDSSTQKKPLTTTEMKEPSK*FQVLSKP*LIPSLHLICESVIH*EAKKL*LPCNPKSLSYT*KSGINFPRSQLKRRII*QWDQGQSNIQNLAVNDTCKLVLNREWRFDPV*HP*GIWGPLTVKVQIAKSKP*AVHSFLNILCNQLIEAGEQK*MLKEIRGNINQVNRKVERLKSMNK*VK*SFAET*RQPG*GIRHHSTQK*YHQL*NIRHQ*RTTPPTTD 2064
Range 4: 1175 to 2068 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
423.1 bits(917) | 0.0 | 204/298(68%) | 0/298(0%) | Minus/Minus |
Query 3 LWFLQSMCRRAARIYMTCLPEHLRS*VVVEDWSNEHRP*SNPTRLQGL*PELKPNDKFEQHYNQGQQKRSFDRQEI*G*LFDSRETIDNHKNGNTK*VISSAWQVSTYTFSAFHL*GYHSLKSQKV*IAL*SQEPFLHLKEQNQPP*ELA*KRDHLTKGPRTEQHAEFGG*WHLQTYAQQRMES*ASAISLVNMEPSDD*SAHCQVQTMNYP*PPQCPLQSAH*GRRIKIGAQRNQGSHLSS*LKN*KAQERRQTSQVKFRGNLKTTWPRH*ASSDTKMISPALKYWASIGNHSAHN* 896 L FLQS+ A I+ L E+L+ * VE+WS ++RP* + T+ QG PEL PN +F QH+NQGQQ+R+FD EI*G* FD+ ETIDNH+N K*VISS Q TYT SA HL* +SL+SQK IAL* QEPFLHLKE+NQ P*+ *K+DHLT GPRTEQH EFGG* HLQT AQQRME *+S L NM PSD *SA+CQVQTM+ P* PQ PLQSAH*GRR KI AQRNQG + SS* K+*KAQE Q SQVKFRGNLKTTW RH*AS DTKMISPALKY ASI NHSAHN* Subject 1175 LGFLQSVRWGTALIHTNYLQEYLKR*ASVENWSQKNRP*LSLTKPQGRWPEL*PNYRF*QHHNQGQQRRTFDHLEI*G*FFDTEETIDNHRNERAK*VISSVEQALTYTLSAPHL*ECYSLRSQKALIAL*PQEPFLHLKERNQLP*KST*KKDHLTMGPRTEQHTEFGG**HLQTCAQQRMEI*SSVTPLGNMGPSDG*SANCQVQTMSRP*LPQYPLQSAH*GRRTKIDAQRNQG*YQSS*QKS*KAQEHEQMSQVKFRGNLKTTWLRH*ASFDTKMISPALKY*ASIENHSAHN* 2068
Range 5: 1542 to 2081 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
216.0 bits(465) | 0.0 | 109/180(61%) | 0/180(0%) | Plus/Plus |
Query 370 VCRCHQPPNSACCSVLGPFVK*SLF*ANS*GG*FCSFKCKNGSWDHRAI*TFWLFSE*YPHK*NAEKV*VETCQALEITYLVFPFLWLSMVSLESKS*PQISWRSKDLFC*P*L*CCSNLSFGFSSGHSPWSLVGFD*GLCXXXXXXXXXXXXKCSGRQVM*IRAALRHILWRNHSMTQT 909 VCRCH PPNS CCSVLGP V+*S F* + *G *F SFKCK GSW +RAI FWL SE*+ HK* AE+V*V+ C LEITYL FLWLSMVS SK+ P IS SK L C*P*L CC NL FG+SSGH P V +*GL LQ ST L K S R +*I A + LWRN S +++ Subject 1542 VCRCH*PPNSVCCSVLGPIVR*SFF*VDF*GS*FRSFKCKKGSWGYRAIKAFWLLSE*HSHK*GAERV*VKACSTLEITYLALSFLWLSMVSSVSKNQP*ISK*SKVLLC*P*LWCC*NL*FGYSSGHRP*GFVRLN*GLFFWLQFSTEAHLFKYS*R*FV*ISAVPQRTLWRNPSQSRS 2081
Range 6: 1173 to 1499 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
184.8 bits(397) | 0.0 | 85/109(78%) | 0/109(0%) | Plus/Plus |
Query 1 D*LWAEWFPIDAQYFKAGDIIFVSDDA*CLGQVVFKFPRNFT*LVCLRS*AFQFFS*LDRCDP*FL*APIFILLPQ*AD*RGH*GGYG*FMVWTWQCAL*SSEGSIFTR 327 D LWAEWF IDA YFKAGDIIFVS+DA*CL QVVFKFPRNFT*L+C S*AFQ F *LD P*FL*A IF+LLPQ*AD RG+*G YG MVWTWQ AL* SEG IF R Subject 1173 DQLWAEWFSIDA*YFKAGDIIFVSNDA*CLSQVVFKFPRNFT*LICSCS*AFQLFC*LD*YYP*FL*ASIFVLLPQ*ADCRGY*GSYGRLMVWTWQFAL*PSEGPIFPR 1499
Range 7: 1178 to 1609 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
217.8 bits(469) | 0.0 | 111/144(77%) | 0/144(0%) | Plus/Plus |
Query 6 VVGGVVPY*CPIFQSW*YHFCVG*CLMPWPGCLQVSAKXXXXXXXXXXXXXIFQLT**M*PLISLSTYFYSPASMS*LKRTLRRLWIVHGLDLAMRTLIVRGLHIH*GYRTGLTLHSLLSISLQVPSTTKFCMLLCPWSLCQMI 437 VVGGVV Y*C IFQSW*YHFCV *CLMP PGCLQVSAKLHLT L LLSLS F LT* + PLISLS YF SPASMS*L+R LR+LW HGLDLA+ TL VRG HI *G TG LHSLLS SLQV T KFCMLLCPWS CQMI Subject 1178 VVGGVVLY*CLIFQSW*YHFCVE*CLMP*PGCLQVSAKLHLTHLFMLLSLSTFLLT*LILPLISLSIYFCSPASMS*LQRILRKLWTAHGLDLAICTLTVRGPHIP*GCHTGSNLHSLLSTSLQVSLTAKFCMLLCPWSHCQMI 1609
Range 8: 1649 to 2065 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
181.1 bits(389) | 0.0 | 90/139(65%) | 0/139(0%) | Plus/Plus |
Query 477 FQV*EWLLGSQGNLNFLAF**MIPS*MKCREGIS*DLPST*NHLLGISIFVVVNGFS*IEELTSDFLAIERPLLLTLIVMLLKFIVWFQLRSQPLESCWV*LRSMLVTPILNNNSTP*MFWKASHVNPCSPPTHTLEKP 893 FQV*E LLG QGN +FLA **+ S M+CREGIS* L +T*NHLLG I VVVNGF +EE T +F IE P LLTLIV+LLK IVW QLR PL C *LRS+L+ PILN +S+ +F K VN CSPPTHTLEKP Subject 1649 FQV*ERLLGLQGNQSFLAS**ITLSQMRCREGIS*GLLNT*NHLLGSFISVVVNGFFCVEESTLNF*VIESPPLLTLIVVLLKSIVWLQLRPSPLRFCQA*LRSILLAPILNRSSSLQIFLKVICVNQCSPPTHTLEKP 2065
Grapevine rupestris stem pitting associated virus isolate VF1, partial genome
Sequence ID: KT948710.1 Length: 8716 Number of Matches: 9
Range 1: 1175 to 2065 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
610.9 bits(1327) | 0.0 | 267/297(90%) | 0/297(0%) | Plus/Plus |
Query 2 ISCGRSGSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGNAHFNRQRAPYSLGISHWLNSPFSVEHKFAGAINHQILHVALSLVPLSNDPFFKLTPREVDSALSSVRMALGITGQSKLFGFLVNDTLINEMQRRYKLRLAKHLKSLTWYFHFCGCQWXXXXXXXXXXXXGDRKTSFADLDCNVAQIYRLVSAQVTAPGVLLGLTKVYARYSNPQQQLNSLNVLEGKSCKSVQPSDTYSGET 892 ISCGRSGSLLMPNISKLVISFLCRMMPN LARLSSSFRETSLDSFVYALEPFNFSVNLIDVTPDFFEHLFLFSC NELIEEDIEEVMDSSWFGLGN +FNRQRAPYSLG+SHWLNSPFSVE KFAGAINHQILHVAL+LVPL NDP FKL PREVDS LSSVRMALGITGQS+LFGFLVNDTLINE+QRRYKLRLA+HLKSLTWYFHFCGCQWFLLNRR NL+FLGDRK+SFADLDCNV QIYRLVSAQ TAPGVLLGLTKVY SN QQ+LNSLN LEGKS +SVQPSD GET Subject 1175 ISCGRSGSLLMPNISKLVISFLCRMMPNVLARLSSSFRETSLDSFVYALEPFNFSVNLIDVTPDFFEHLFLFSCRNELIEEDIEEVMDSSWFGLGNVYFNRQRAPYSLGVSHWLNSPFSVESKFAGAINHQILHVALALVPLPNDPSFKLAPREVDSVLSSVRMALGITGQSRLFGFLVNDTLINELQRRYKLRLAQHLKSLTWYFHFCGCQWFLLNRRNNLKFLGDRKSSFADLDCNVTQIYRLVSAQATAPGVLLGLTKVYVCCSNTQQRLNSLNALEGKSSESVQPSDACFGET 2065
Range 2: 1174 to 2064 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
561.9 bits(1220) | 0.0 | 261/297(88%) | 0/297(0%) | Minus/Minus |
Query 1 VSPEYVSEGCTDLHDLPSRTFKELSCC*GLE*RA*TLVKPNKTPGAVT*AETKR*I*ATLQSRSAKEVFRSPRNLRLTLRFKRNH*QPQKWKYQVSDFKCLASLNLYLLCISFMRVSFTKKPKSLDCPVIPRAILTLERAESTSLGVSLKKGSFDKGTKDRATCRIWWLMAPANLCSTENGELSQCDIPSEYGAL*RLKCALPSPNHELXXXXXXXXXXXSLRQENKNRCSKKSGVTSIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREPLRPQLI 891 VSP++ SEGCTD DLPSR FKELS C* LE + *TLVKPNKTPGAV *AET+R*I TLQSRSAKE FRSP+NLRL LRFKRNH QPQK KYQVSDFKC ASLNLYLLC SFMRVSFTKKPKSLDCPVIPRAILTLER ESTSLG SLK+GSF KGTK RATC+IWWLMAPANL STENGELSQCD PSEYGAL*RLK LPSPNHELSITSSMSSSISSLRQENKNRCSKKSGVTSIKLTEKLKGSRA*TNESSEVSRKLED+LA+ LGIIRHKNDITSFE+LGINREPLRPQLI Subject 1174 VSPKHASEGCTDSLDLPSRAFKELSLC*VLEQQT*TLVKPNKTPGAVA*AETRR*IWVTLQSRSAKEDFRSPKNLRLFLRFKRNHWQPQK*KYQVSDFKCCASLNLYLLCNSFMRVSFTKKPKSLDCPVIPRAILTLERTESTSLGASLKEGSFGKGTKARATCKIWWLMAPANLLSTENGELSQCDTPSEYGAL*RLKYTLPSPNHELSITSSMSSSISSLRQENKNRCSKKSGVTSIKLTEKLKGSRA*TNESSEVSRKLEDSLARTLGIIRHKNDITSFEMLGINREPLRPQLI 2064
Range 3: 1176 to 2060 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
503.3 bits(1092) | 0.0 | 227/295(77%) | 0/295(0%) | Minus/Minus |
Query 3 LQSMCRRAARIYMTCLPEHLRS*VVVEDWSNEHRP*SNPTRLQGL*PELKPNDKFEQHYNQGQQKRSFDRQEI*G*LFDSRETIDNHKNGNTK*VISSAWQVSTYTFSAFHL*GYHSLKSQKV*IAL*SQEPFLHLKEQNQPP*ELA*KRDHLTKGPRTEQHAEFGG*WHLQTYAQQRMES*ASAISLVNMEPSDD*SAHCQVQTMNYP*PPQCPLQSAH*GRRIKIGAQRNQGSHLSS*LKN*KAQERRQTSQVKFRGNLKTTWPRH*ASSDTKMISPALKYWASIGNHSAHN* 887 LQSM RAA I++TCL E RS*V VE WSN+HRP* NP +LQGL PELKP+DKF H NQGQQ+R+FDR +I*G F SRET NH+N NTK*VISSA QVSTYTFSA HL*G HSLKSQK *IAL*SQEPF LKE+NQ P* LA*++DHL KGPR EQHA+FGG*WHLQT +QQRMES*A+ I LVNMEPSD *S HC VQTMNYP PPQCP QSAH GRR KIGAQRNQGSHLSS*L+N*K QE RQ +QVKF GNLKT W H AS DTKMISPALK WASIGNHSAHN* Subject 1176 LQSMHLRAALIHLTCLQERSRS*VFVECWSNKHRP*LNPIKLQGLWPELKPDDKFG*HCNQGQQRRTFDRPKI*GCFFGSRETTGNHRNENTK*VISSAVQVSTYTFSATHL*GCHSLKSQKA*IAL*SQEPFSRLKERNQLP*GLA*RKDHLAKGPRPEQHAKFGG*WHLQTCSQQRMES*ANVIPLVNMEPSDG*STHCLVQTMNYPLPPQCPPQSAHCGRRTKIGAQRNQGSHLSS*LRN*KVQEHRQMNQVKFHGNLKTAWLGHWASFDTKMISPALKCWASIGNHSAHN* 2060
Range 4: 1175 to 2059 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
501.9 bits(1089) | 0.0 | 228/295(77%) | 0/295(0%) | Minus/Minus |
Query 2 SRVCVGGLHGFT*LAFQNI*GVELLLRIGVTSIDLSQTQQDSRGCDLS*NQTINLSNITIKVSKRGLSIAKKSEVNSSIQEKPLTTTKMEIPSK*FQVLGKSQLIPSLHFIYEGIIH*KAKKFRLPCDPKSHSYT*KSRINLPRS*LKKGII*QRDQGQSNMQNLVVDGTCKLMLNREWRVKPVRYP**IWSPLTIKVRIAKSKP*TIHNLLNVLFNQLIEAGE*K*VLKEIRGHIYQVN*KIERLKSVDKRVK*SFAET*RQPGQGIRHHPTQK*YHQL*NIGHQ*GTTPPTTN 886 S+ C+ GLH FT*LAF+++ GV+ LL +G T+IDLS TQ +SRGC LS*NQTINL NI IKVSK GLSIA+K EV SS+QEKPL TT+M+IPS+*FQVL KSQLIPSL IYEG+IH*KAKK RLPCDPKSHS+ *K+ IN PR *L+ II QRDQGQSNMQNLVVDGTCKL LNREWRVKP+ YP**IWSPLT+KV IA SKP*TIH LLNVL NQLI AGE K*VLKEIRGHIYQVN*+IER KS+DK +K*SF ET*RQPG I HH TQK*YHQL*N+GHQ*GTTPPTT+ Subject 1175 SKACI*GLH*FT*LAFKSVQGVKSLLSVGATNIDLS*TQ*NSRGCGLS*NQTINLGNIAIKVSKGGLSIAQKFEVVSSVQEKPLATTEMKIPSE*FQVLCKSQLIPSLQLIYEGVIH*KAKKPRLPCDPKSHSHA*KNGINFPRG*LEGRIIWQRDQGQSNMQNLVVDGTCKLALNREWRVKPM*YP**IWSPLTVKVHIA*SKP*TIHYLLNVLLNQLIAAGEQK*VLKEIRGHIYQVN*EIERFKSIDK*IK*SFTET*RQPG*DIGHHSTQK*YHQL*NVGHQ*GTTPPTTD 2059
Range 5: 1179 to 1610 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
247.6 bits(534) | 0.0 | 121/144(84%) | 0/144(0%) | Plus/Plus |
Query 6 VVGGVVPY*CPIFQSW*YHFCVG*CLMPWPGCLQVSAKXXXXXXXXXXXXXIFQLT**M*PLISLSTYFYSPASMS*LKRTLRRLWIVHGLDLAMRTLIVRGLHIH*GYRTGLTLHSLLSISLQVPSTTKFCMLLCPWSLCQMI 437 VVGGVVPY*CP FQSW*YHFCV *C M PGCLQVS KLHL LS LL+LSI QLT**M*PLISLSTYF SPA+MS*L+RTLRR WIVHGLD AM TL VRGLHIH*GY GLTLHSLL SLQVPSTTKFCMLL PWSLCQMI Subject 1179 VVGGVVPY*CPTFQSW*YHFCVE*CPMS*PGCLQVSVKLHLIHLSMLLNLSISQLT**M*PLISLSTYFCSPAAMS*LRRTLRR*WIVHGLD*AMCTLTVRGLHIH*GYHIGLTLHSLLRASLQVPSTTKFCMLLWPWSLCQMI 1610
Range 6: 1650 to 2063 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
216.9 bits(467) | 0.0 | 102/138(74%) | 0/138(0%) | Plus/Plus |
Query 477 FQV*EWLLGSQGNLNFLAF**MIPS*MKCREGIS*DLPST*NHLLGISIFVVVNGFS*IEELTSDFLAIERPLLLTLIVMLLKFIVWFQLRSQPLESCWV*LRSMLVTPILNNNSTP*MFWKASHVNPCSPPTHTLEK 890 FQ *EWLLGSQGNL FLAF**M PS*M CREGIS*DL ST*NH LGI I VV +GFS* EE TS+F AIE P LLTLI ML KFIVWFQLR QPLE WV*LRSM V P LN + TP* KAS VN CSP H LE+ Subject 1650 FQA*EWLLGSQGNLGFLAF**MTPS*MSCREGIS*DLHST*NHSLGIFISVVASGFS*TEETTSNFWAIESPPLLTLIAMLPKFIVWFQLRPQPLEFYWV*LRSMFVAPTLNKDLTP*TLLKASQVNQCSPQMHALER 2063
Range 7: 1543 to 1965 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
245.3 bits(529) | 0.0 | 107/141(76%) | 0/141(0%) | Plus/Plus |
Query 370 VCRCHQPPNSACCSVLGPFVK*SLF*ANS*GG*FCSFKCKNGSWDHRAI*TFWLFSE*YPHK*NAEKV*VETCQALEITYLVFPFLWLSMVSLESKS*PQISWRSKDLFC*P*L*CCSNLSFGFSSGHSPWSLVGFD*GLC 792 VCRCHQPPN ACCS LGPF K*S A+ *G *F SFK +NGSWDHRAI* FWLFSE*+PHK* AEKV*VETC ALEIT+LVF FLWL +VSLE K PQI RSK L C*P*L C NLS GFSSGHSPWS +GF+*GLC Subject 1543 VCRCHQPPNFACCSGLGPFAK*SFLQASP*GS*FRSFKRENGSWDHRAI*AFWLFSE*HPHK*VAEKV*VETCTALEITHLVFSFLWLPVVSLEPKKQPQIFGRSKVLLC*P*LQCYPNLSSGFSSGHSPWSFIGFN*GLC 1965
Range 8: 1174 to 1500 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
204.5 bits(440) | 0.0 | 90/109(83%) | 0/109(0%) | Plus/Plus |
Query 1 D*LWAEWFPIDAQYFKAGDIIFVSDDA*CLGQVVFKFPRNFT*LVCLRS*AFQFFS*LDRCDP*FL*APIFILLPQ*AD*RGH*GGYG*FMVWTWQCAL*SSEGSIFTR 327 D LWAEWFPIDAQ+FKAGDIIFVS+DA C Q VFKFP NFT* +CL S* FQF S*LDRCDP*FL*APIF+LLPQ*AD* GH*GG G*FMVWT QC L* SEGSIFTR Subject 1174 DQLWAEWFPIDAQHFKAGDIIFVSNDAQCPSQAVFKFP*NFT*FICLCS*TFQFLS*LDRCDP*FL*APIFVLLPQ*AD*GGH*GGNG*FMVWTRQCVL*PSEGSIFTR 1500
Grapevine rupestris stem pitting associated virus isolate GRSPaV LSL, complete genome
Sequence ID: KR054735.1 Length: 8754 Number of Matches: 10
Range 1: 1174 to 2058 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
440.5 bits(955) | 0.0 | 192/295(65%) | 0/295(0%) | Plus/Plus |
Query 2 ISCGRSGSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGNAHFNRQRAPYSLGISHWLNSPFSVEHKFAGAINHQILHVALSLVPLSNDPFFKLTPREVDSALSSVRMALGITGQSKLFGFLVNDTLINEMQRRYKLRLAKHLKSLTWYFHFCGCQWXXXXXXXXXXXXGDRKTSFADLDCNVAQIYRLVSAQVTAPGVLLGLTKVYARYSNPQQQLNSLNVLEGKSCKSVQPSDTYSG 886 ISCGRSGSL+MPNI KL+ISFLCRMMPN LARLSSSFRE+SLDSFVY+LEPFNFS+NL+D+T +FFEH+FLFSC NELIEE++EEVMD+SWFGLGNAHFNR++ P+S G WLNS FSVEHKF G +N+QILH LSL+PL NDP FK + RE+DSALS V+ AL ITGQSKLF F+V+DTL+ +Q Y+ RL+ H+K+LT +FH CG QWFLL RR NLRFL DRK+SFADL C VA+IY LV AQVT P GL +VY +S + N G++ S++ + SG Subject 1174 ISCGRSGSLIMPNIHKLIISFLCRMMPNVLARLSSSFRESSLDSFVYSLEPFNFSINLVDITAEFFEHMFLFSCRNELIEENVEEVMDNSWFGLGNAHFNRRQNPFSFGRDFWLNSKFSVEHKFPGIVNNQILHAVLSLIPLPNDPKFKPSGREIDSALSRVKAALAITGQSKLFRFVVDDTLLRSVQSAYRFRLSSHIKALTEFFHICGLQWFLLCRRANLRFLCDRKSSFADLSCQVAKIYNLVVAQVTLPNASSGLIQVYIDHSRSNKNSNPHFAATGEARDSIEAVNLDSG 2058
Range 2: 1173 to 1973 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
302.1 bits(653) | 0.0 | 162/267(61%) | 0/267(0%) | Minus/Minus |
Query 1 E*RA*TLVKPNKTPGAVT*AETKR*I*ATLQSRSAKEVFRSPRNLRLTLRFKRNH*QPQKWKYQVSDFKCLASLNLYLLCISFMRVSFTKKPKSLDCPVIPRAILTLERAESTSLGVSLKKGSFDKGTKDRATCRIWWLMAPANLCSTENGELSQCDIPSEYGAL*RLKCALPSPNHELXXXXXXXXXXXSLRQENKNRCSKKSGVTSIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREPLRPQLI 801 E* *T +KP+ G VT A TK *I AT Q RSAKE FRS RNLRL LR +RNH*+PQ WK V F C SL Y LC RVS T KSLDCPVI +A LT + AES SL L GS G D C I L P NLCSTEN ELSQ +P E G RLKCALPSPN ELSITSS SSI+SLRQEN+N CSK S V S KL EKLKGSR TNES+E S KLED+LA+ GII +N+I S +LGI +EPLRPQLI Subject 1173 E*SM*T*IKPDDALGNVTCATTKL*IFAT*QERSAKEDFRSHRNLRLALRQRRNH*RPQMWKNSVRAFMCEESLKRYALCTLRRRVSSTTNLKSLDCPVIAKAALTRDSAESISLPEGLNLGSLGNGINDNTACSI*LLTIPGNLCSTENLELSQKSLPKENGFCRRLKCALPSPNQELSITSSTFSSINSLRQENRNICSKNSAVMSTKLIEKLKGSREYTNESNEDSLKLEDSLARTFGIILQRNEIMSL*MLGIIKEPLRPQLI 1973
Range 3: 1174 to 1488 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
100.5 bits(213) | 0.0 | 49/105(47%) | 0/105(0%) | Minus/Minus |
Query 2 WSPLTIKVRIAKSKP*TIHNLLNVLFNQLIEAGE*K*VLKEIRGHIYQVN*KIERLKSVDKRVK*SFAET*RQPGQGIRHHPTQK*YHQL*NIGHQ*GTTPPTTN 316 W I++RI KP +H NVL + LI AG+ + + K++ ++ +N*K+ERLK + KRV * F ET*R PGQ I HH T++* ++L N+GH TT PTTN Subject 1174 WVLSAIEMRIT*PKPRIVHYFFNVLLD*LIAAGKQEHMFKKLSRNVN*IN*KVERLKGIHKRV**RFPET*R*PGQNIWHHSTEE*DNELVNVGHYQRTTSPTTN 1488
Range 4: 1666 to 1995 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
91.8 bits(194) | 0.0 | 45/110(41%) | 0/110(0%) | Minus/Minus |
Query 494 VELLLRIGVTSIDLSQTQQDSRGCDLS*NQTINLSNITIKVSKRGLSIAKKSEVNSSIQEKPLTTTKMEIPSK*FQVLGKSQLIPSLHFIYEGIIH*KAKKFRLPCDPKS 823 + +L+R GV +++L+QT R C+L NQ INL ++T KV K GLS+ +K E+ S ++KPL TT +E S+ V G+ + I +LH +G+IH K +K L C+ +S Subject 1666 IGILVRAGVINVNLNQT**CIR*CNLCYNQVINLRHLTGKVGKGGLSVTQKPEIGSPAEKKPLKTTNVEKFSEGLYV*GEPKTICTLHATQKGVIHHKPEKLGLSCNCQS 1995
Range 5: 1173 to 1493 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
73.9 bits(155) | 0.0 | 45/107(42%) | 0/107(0%) | Plus/Plus |
Query 1 D*LWAEWFPIDAQYFKAGDIIFVSDDA*CLGQVVFKFPRNFT*LVCLRS*AFQFFS*LDRCDP*FL*APIFILLPQ*AD*RGH*GGYG*FMVWTWQCAL*SSEGSIF 321 D*LWA+WF +AQ+ +A +I + +DA C GQ +FKF F LVC+ *AFQ F+* * * + + LPQ* + * G F+VW CA S IF Subject 1173 D*LWAKWFFDNAQHSQAHYLIPL*NDAKCSGQAIFKFQGIFIRLVCVFP*AFQLFN*FS*HYG*VF*TYVPVFLPQ*VNRGER*RSNGQFLVWAR*CAFQSPTKPIF 1493
Range 6: 1679 to 1981 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
49.6 bits(102) | 0.0 | 37/101(37%) | 0/101(0%) | Plus/Plus |
Query 507 QGNLNFLAF**MIPS*MKCREGIS*DLPST*NHLLGISIFVVVNGFS*IEELTSDFLAIERPLLLTLIVMLLKFIVWFQLRSQPLESCWV*LRSMLVTPIL 809 Q N +F M P + CR I P T* L S FVV +GF E S F E P L T V +FI W R L V* + L+TP L Subject 1679 QDNPSFSGLWWMTPFCVACRVHIVLGSPHT*RPSLNFSTFVVFSGFFSAGEPISGFCVTESPPLPTFPVRWRRFITWL*HRLHYLMHHQV*FKFTLITPAL 1981
Range 7: 1175 to 1609 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
87.2 bits(184) | 0.0 | 58/145(40%) | 0/145(0%) | Minus/Minus |
Query 3 DHLTKGPRTEQHAEFGG*WHLQTYAQQRMES*ASAISLVNMEPSDD*SAHCQVQTMNYP*PPQCPLQSAH*GRRIKIGAQRNQGSHLSS*LKN*KAQERRQTSQVKFRGNLKTTWPRH*ASSDTKMISPALKYWASIGNHSAHN* 437 DH G T HA F * +L+ Y Q++ S*A + M D*+AH QT N P Q + H GR+ Q+ Q +*LK+*KAQ QTS +K NLK WP H AS M A + WA NH AHN* Subject 1175 DH*VMGSMTTPHAVFDC*QYLEIYVQRKTWS*AKNLFQKKMGFVGD*NAHYLAQTKNCPLLLQRSPRLTHCGRKTGTYVQKTQP*CQLN*LKS*KAQGNTQTSLMKIP*NLKIAWPEHLASFYRGMR**ACECWALSKNHFAHN* 1609
Range 8: 1175 to 1285 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
43.2 bits(88) | 0.0 | 23/37(62%) | 0/37(0%) | Plus/Plus |
Query 3 LVVGGVVPY*CPIFQSW*YHFCVG*CLMPWPGCLQVS 113 LVVG VV *CP F S H V *C M WPG LQVS Subject 1175 LVVGEVVL**CPTFTSSLSHSSVE*CQMFWPGYLQVS 1285
Range 9: 1785 to 1952 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
35.9 bits(72) | 0.0 | 21/56(38%) | 0/56(0%) | Plus/Plus |
Query 613 VFPFLWLSMVSLESKS*PQISWRSKDLFC*P*L*CCSNLSFGFSSGHSPWSLVGFD 780 +FP LW S+VS +S Q+S K L C P L +L G S+G+ ++ FD Subject 1785 IFPHLWSSVVSSLPESQSQVSV*PKVLLCRPFLSGGEDL*LGCSTGYIT*CIIRFD 1952
Rupestris stem pitting associated virus isolate RSPaV PN, complete genome
Sequence ID: AY368172.2 Length: 8743 Number of Matches: 10
Range 1: 1174 to 2037 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
500.1 bits(1085) | 0.0 | 213/288(74%) | 0/288(0%) | Plus/Plus |
Query 2 ISCGRSGSLLMPNISKLVISFLCRMMPNALARLSSSFRETSLDSFVYALEPFNFSVNLIDVTPDFFEHLFLFSCLNELIEEDIEEVMDSSWFGLGNAHFNRQRAPYSLGISHWLNSPFSVEHKFAGAINHQILHVALSLVPLSNDPFFKLTPREVDSALSSVRMALGITGQSKLFGFLVNDTLINEMQRRYKLRLAKHLKSLTWYFHFCGCQWXXXXXXXXXXXXGDRKTSFADLDCNVAQIYRLVSAQVTAPGVLLGLTKVYARYSNPQQQLNSLNVLEGKSCKSVQ 865 I CGRSGSLLMPNISKLV SF CRMMPNALARLSSSFRE+SLDSFVYALEPFNF+VNLIDVTPDFFEHLFLFSCLNEL+EE+IEEVMD+SWFGL N HFNRQRAPYSLG SHWL+SPFSVEHKF G +NHQIL VALSL+PL NDP F+ T E++ +L S+RMAL T QSKLFGFLVN LI+EMQ++YK +LA+HLK+LTW+FHFCG QWFLL++R NL+FLG+ K+SFADLDCNVA++Y LV Q AP L GL KVY SNPQQ+ N + +G+SC+ VQ Subject 1174 IGCGRSGSLLMPNISKLVTSFFCRMMPNALARLSSSFRESSLDSFVYALEPFNFAVNLIDVTPDFFEHLFLFSCLNELMEENIEEVMDNSWFGLSNVHFNRQRAPYSLGTSHWLSSPFSVEHKFTGIVNHQILQVALSLIPLPNDPAFRPTSEEINFSLLSIRMALESTRQSKLFGFLVNSALISEMQKKYKTKLAQHLKALTWFFHFCGLQWFLLSKRANLKFLGECKSSFADLDCNVAKLYNLVITQAIAPRALSGLIKVYVGSSNPQQKSNPQTIFDGESCELVQ 2037
Range 2: 1173 to 2036 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
407.0 bits(882) | 0.0 | 202/288(70%) | 0/288(0%) | Minus/Minus |
Query 1 CTDLHDLPSRTFKELSCC*GLE*RA*TLVKPNKTPGAVT*AETKR*I*ATLQSRSAKEVFRSPRNLRLTLRFKRNH*QPQKWKYQVSDFKCLASLNLYLLCISFMRVSFTKKPKSLDCPVIPRAILTLERAESTSLGVSLKKGSFDKGTKDRATCRIWWLMAPANLCSTENGELSQCDIPSEYGAL*RLKCALPSPNHELXXXXXXXXXXXSLRQENKNRCSKKSGVTSIKLTEKLKGSRA*TNESSEVSRKLEDNLAKALGIIRHKNDITSFEILGINREPLRPQLI 864 CT+ HD PS+ L C GLE *TL+KP+K GA+ * TK * ATLQSRSAKE SP+NLRL L RNH*+PQK K QVS FKC AS LY CIS MR FTKKPKS DC V RAIL L+R + S V L GSF G KDRATC+I L P NLCSTE GELSQC++PSEYGAL RLK L SPNHELSITSS+ SSI+SLRQENKNRCSKKSGVTSIK T KLKGSRA*TNESSE SRKLED+LAKALGIIR KND+TSFEILGINREPLRPQ I Subject 1173 CTNSHDSPSKMVWGLDFCWGLELPT*TLIKPDKALGAIA*VITKL*SLATLQSRSAKEDLHSPKNLRLALLLSRNH*RPQK*KNQVSAFKCWASFVLYFFCISLMRALFTKKPKSFDCLVDSRAILMLKREKLISSEVGLNAGSFGSGIKDRATCKI**LTIPVNLCSTEKGELSQCEVPSEYGALWRLK*TLLSPNHELSITSSIFSSINSLRQENKNRCSKKSGVTSIKFTAKLKGSRA*TNESSEDSRKLEDSLAKALGIIRQKNDVTSFEILGINREPLRPQPI 2036
Range 3: 1174 to 2049 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
281.5 bits(608) | 0.0 | 143/292(49%) | 0/292(0%) | Minus/Minus |
Query 2 CVGGLHGFT*LAFQNI*GVELLLRIGVTSIDLSQTQQDSRGCDLS*NQTINLSNITIKVSKRGLSIAKKSEVNSSIQEKPLTTTKMEIPSK*FQVLGKSQLIPSLHFIYEGIIH*KAKKFRLPCDPKSHSYT*KSRINLPRS*LKKGII*QRDQGQSNMQNLVVDGTCKLMLNREWRVKPVRYP**IWSPLTIKVRIAKSKP*TIHNLLNVLFNQLIEAGE*K*VLKEIRGHIYQVN*KIERLKSVDKRVK*SFAET*RQPGQGIRHHPTQK*YHQL*NIGHQ*GTTPPTTN 877 C+ L+ FT* A +N GV LL I +ID + T SR LS NQ + ++ IK+ K GL+ +K EV+S ++PL T +M+ PS+ FQVLG+ +L+ LH YEG +H +AK+F LP +SH Y *+ +INL R + II Q +QG SN+QNL+++ KLMLNR+ R +PV *IWSPL I+V IAKS+P* IHNLLN+ +Q IEAGE K*+LK++RG+I Q+ K++R KS+D+ VK* F +T* +RHH +K* + L*NIGH * TTPPT N Subject 1174 CMERLYQFT*FAIKNGLGVRFLLGIRTANIDFN*T**SSRRNSLSYNQIVEFGDVAIKICKGGLTFTQKFEVSSLT*QEPLKTAEMKKPSECFQVLGEFRLVFFLHLTYEGAVHQEAKEF*LPRGLESHPYA*EGKINLLRGWPECRIIWQWNQG*SNLQNLMINNPRKLMLNRKGRAEPV*SSQ*IWSPLAIEVNIAKSEP*IIHNLLNIFLHQFIEAGEQK*MLKKVRGNINQIYCKVKRFKSIDE*VK*RFTKT*G*SS*SVRHHSAEK*RN*L*NIGH**RTTPPTAN 2049
Range 4: 1178 to 2059 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
244.4 bits(527) | 0.0 | 142/294(48%) | 0/294(0%) | Minus/Minus |
Query 6 LQSMCRRAARIYMTCLPEHLRS*VVVEDWSNEHRP*SNPTRLQGL*PELKPNDKFEQHYNQGQQKRSFDRQEI*G*LFDSRETIDNHKNGNTK*VISSAWQVSTYTFSAFHL*GYHSLKSQKV*IAL*SQEPFLHLKEQNQPP*ELA*KRDHLTKGPRTEQHAEFGG*WHLQTYAQQRMES*ASAISLVNMEPSDD*SAHCQVQTMNYP*PPQCPLQSAH*GRRIKIGAQRNQGSHLSS*LKN*KAQERRQTSQVKFRGNLKTTWPRH*ASSDTKMISPALKYWASIGNHSAHN 887 LQ + + I+M + *+ D + +HR * N +L *PEL PN + + NQ Q+R++ +I*G*L TI++ +N TK*V+SSA +VS+ FSA HL*G S +SQ+V IA ++EP L L+ +N P LA* +DHL R EQ A+F * TYAQQ+ ES*AS VNMEP D*S HC V+TMNYP*PPQ S H*GRR KI AQ++QG H S+ L++*K QE R+ SQVK NL+ + *AS KM ALKYWA I NHSAH+ Subject 1178 LQCLHGKTVPIHMIRHQKWFGG*ISAGD*NCQHRL*LNLIKL*AQ*PEL*PNCRVWRRCNQDLQRRTYIHPKI*G*LSYLAGTIEDRRNEKTK*VLSSAGRVSSCIFSASHL*GRCSPRSQRVLIASWTREPSLCLRGKN*SPQRLA*MQDHLAVESRIEQPAKFDD*QSP*TYAQQKRES*ASVKFPVNMEPFGD*SEHC*VRTMNYP*PPQYFPPSIH*GRRTKIDAQKSQG*HQSNLLQS*KVQEHRRMSQVKIHENLRIV*LKR*ASFGRKMT*LALKYWALIENHSAHS 2059
Range 5: 1179 to 1496 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
120.2 bits(256) | 0.0 | 62/106(58%) | 0/106(0%) | Plus/Plus |
Query 7 LWAEWFPIDAQYFKAGDIIFVSDDA*CLGQVVFKFPRNFT*LVCLRS*AFQFFS*LDRCDP*FL*APIFILLPQ*AD*RGH*GGYG*FMVWTWQCAL*SSEGSIFT 324 LWAEWF I+AQYFKA +IF+ +DA* + KF FT*L+ L S* F S D C P* *A IF+LLPQ* D +*GGYG*FMV T QC+L S +GSIFT Subject 1179 LWAEWFSINAQYFKASYVIFLPNDA*RFS*TILKFS*IFT*LIRLCS*TF*LCSKFD*CYP*LF*ASIFVLLPQ*IDGGKY*GGYG*FMVRT*QCSLQSPKGSIFT 1496
Range 6: 1566 to 1844 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.4 bits(191) | 0.0 | 51/93(55%) | 0/93(0%) | Plus/Plus |
Query 394 NSACCSVLGPFVK*SLF*ANS*GG*FCSFKCKNGSWDHRAI*TFWLFSE*YPHK*NAEKV*VETCQALEITYLVFPFLWLSMVSLESKS*PQI 672 N A CS+L K*S AN *G *F K K+GS H AI T WL E PHK*+AEK+ ET ALE T+LVF FL SMV + +S*PQI Subject 1566 NFAGCSILDSTAK*SCIQANL*GD*FFPLKHKDGSRVHEAIKTLWLLGEQRPHK*DAEKIQDETRPALESTHLVFSFLRSSMVPAK*ES*PQI 1844
Range 7: 1863 to 1964 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
28.1 bits(55) | 0.0 | 14/34(41%) | 0/34(0%) | Plus/Plus |
Query 691 LFC*P*L*CCSNLSFGFSSGHSPWSLVGFD*GLC 792 L C *L L FG++SG+ S + F+* LC Subject 1863 LLCRS*LQRRQTLQFGYNSGYCA*SFIRFN*SLC 1964
Range 8: 1352 to 1609 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
103.7 bits(220) | 0.0 | 51/86(59%) | 0/86(0%) | Plus/Plus |
Query 180 M*PLISLSTYFYSPASMS*LKRTLRRLWIVHGLDLAMRTLIVRGLHIH*GYRTGLTLHSLLSISLQVPSTTKFCMLLCPWSLCQMI 437 M PL LS YF SPASM+* ++ LRRLWI+HG DLAM T I +GLHIH TG L LLSISL+ KFC LL P CQMI Subject 1352 MLPLTFLSIYFCSPASMN*WRKILRRLWIIHGSDLAMFTSIAKGLHIHWELHTGSALPFLLSISLRGLLIIKFCRLLYP*FHCQMI 1609
Range 9: 1664 to 2029 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
92.7 bits(196) | 0.0 | 54/122(44%) | 0/122(0%) | Plus/Plus |
Query 492 WLLGSQGNLNFLAF**MIPS*MKCREGIS*DLPST*NHLLGISIFVVVNGFS*IEELTSDFLAIERPLLLTLIVMLLKFIVWFQLRSQPLESCWV*LRSMLVTPILNNNSTP*MFWKASHVN 857 WL +GN N LA * PS*++CR+ + PST* H LG I V NG *+ ELTS+F P L LI +W LR LE V*L+SML I + N TP F A+HVN Subject 1664 WLSSPRGNQNSLASW*TAPS*VRCRKNTRRNSPST*KHSLGFFISAVFNGSC*VRELTSNFWVNVSPPLQILIATSPNSTIWL*LRLLRLELYQV*LKSMLAVLIPSRNLTPKPFLMANHVN 2029
Nucleotide Sequence (714 letters)
Query ID: | ds2016-133_14 |
Query definition: | No definition line |
Query length: | 603 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
545.0 | 2960.3 | 37% | 4.134e-153 | 91% | KX274274.1 | |
483.6 | 2741.8 | 33% | 1.258e-134 | 87% | KX958435.1 | |
458.4 | 2643.4 | 31% | 2.052e-129 | 81% | KT948710.1 | |
435.0 | 2429.7 | 32% | 5.305e-129 | 76% | KR054734.1 | |
425.4 | 1749.0 | 33% | 4.093e-126 | 50% | KX274276.1 |
Alignments
Grapevine rupestris stem pitting associated virus isolate SK704 A, complete genome
Sequence ID: KX274274.1 Length: 8725 Number of Matches: 8
Range 1: 5078 to 5758 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
545.0 bits(1183) | 0.0 | 220/227(97%) | 0/227(0%) | Minus/Minus |
Query 32 KQRVESRPKFAQP*PPLIYCQILYNVGIS*KSKQHLAANPDMTCLSDFQWLQHFC*PSLPQTPALPHETY*HCG*HSMGLLIGKCRAGIFRKALHALASQLPPVALKTSSVFGRPSKK*WSHYPYV*DKCSQNAHKHCSIAHPCPPCVHRRIAELSHTHTVPHDTLSKPFSQPI*PWLTPDCSRVCVF*TILHLNTQTRALQLHSLHPGLRKA*LLATDHHTAFPLV 712 KQRVESRPKFAQP*PPLIYCQILYNVGIS*K KQHLAANPDMTCLSDFQWL+HFC*PSLPQTPALPHETY*HCG*HSMGLLIGKCRAGIFRKALHALASQLPPVALKTSSVFGRP K+*WSHYPYV*DKCSQNAHKHCSIAHPCPPCVHRRIAEL HTH VPHDTLSKPFSQPI*PWLTPDCSRVCVF*TILHLNTQT+ALQLHSLHPGLRKA*LLATDHHTAFPLV Subject 5078 KQRVESRPKFAQP*PPLIYCQILYNVGIS*KLKQHLAANPDMTCLSDFQWLRHFC*PSLPQTPALPHETY*HCG*HSMGLLIGKCRAGIFRKALHALASQLPPVALKTSSVFGRPLKR*WSHYPYV*DKCSQNAHKHCSIAHPCPPCVHRRIAELPHTHIVPHDTLSKPFSQPI*PWLTPDCSRVCVF*TILHLNTQTQALQLHSLHPGLRKA*LLATDHHTAFPLV 5758
Range 2: 5079 to 5759 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
495.5 bits(1075) | 0.0 | 220/227(97%) | 0/227(0%) | Plus/Plus |
Query 33 TRGKAVW*SVAKSYAFLRPG*RL*S*RARV*VFK*RMVQNTHTLEQSGVNQG*MGWENGFERVS*GTVWV*DNSAILR*TQGGHG*AIEQCL*AF*EHLS*T*G**LHHFFDGRPKTLEVFKATGGSCEAKACKALRKIPARHFPIKSPIEC*PQCQYVS*GSAGV*GKEG*QKCCNH*KSLRQVMSGLAARCCFDFHEIPTLYKI*Q*IKGG*GWANFGLLSTRCF 713 TRGKAVW*SVAKSYAFLRPG*RL*S*RA V*VFK*RMVQNTHTLEQSGVNQG*MGWENGFERVS*GT+WV* NSAILR*TQGGHG*AIEQCL*AF*EHLS*T*G**LHH F+GRPKTLEVFKATGGSCEAKACKALRKIPARHFPIKSPIEC*PQCQYVS*GSAGV*GKEG*QKC NH*KSLRQVMSGLAARCCF+FHEIPTLYKI*Q*IKGG*GWANFGLLSTRCF Subject 5079 TRGKAVW*SVAKSYAFLRPG*RL*S*RA*V*VFK*RMVQNTHTLEQSGVNQG*MGWENGFERVS*GTMWV*GNSAILR*TQGGHG*AIEQCL*AF*EHLS*T*G**LHHLFNGRPKTLEVFKATGGSCEAKACKALRKIPARHFPIKSPIEC*PQCQYVS*GSAGV*GKEG*QKCRNH*KSLRQVMSGLAARCCFNFHEIPTLYKI*Q*IKGG*GWANFGLLSTRCF 5759
Range 3: 5081 to 5758 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
484.9 bits(1052) | 0.0 | 222/226(98%) | 0/226(0%) | Plus/Plus |
Query 35 ERKSCVVIRG*KLCFS*ARMKTXXXXXXXXXXQMKNGSKHTYP*AIWSQPGLDGLGKWL*KSIVRYGVGMRQLSNSSMNTGGAWVSN*AMLVSVLRAFILDIRVMTPSLF*WPSENA*SFQSHRWKLRS*GVQSLTENSCSTLSYQKSH*MLATMSVCFMRQCRSLRQRRLAKVLQPLKITQAGHVGIGC*MLL*FS*NPNIVQNLTID*GWLRLGKLWPAFNTLF 712 ERKSCVVIRG*KLCFS*ARMKTVKLKS SLSVQMKNGSKHTYP*AIWSQPGLDGLGKWL*KSIVRY VGMRQLSNSSMNTGGAWVSN*AMLVSVLRAFILDIRVMTPS F*WPSENA*SFQSHRWKLRS*GVQSLTENSCSTLSYQKSH*MLATMSVCFMRQCRSLRQRRLAKV QPLKITQAGHVGIGC*MLL*FS*NPNIVQNLTID*GWLRLGKLWPAFNTLF Subject 5081 ERKSCVVIRG*KLCFS*ARMKTVKLKSLSLSVQMKNGSKHTYP*AIWSQPGLDGLGKWL*KSIVRYDVGMRQLSNSSMNTGGAWVSN*AMLVSVLRAFILDIRVMTPSPF*WPSENA*SFQSHRWKLRS*GVQSLTENSCSTLSYQKSH*MLATMSVCFMRQCRSLRQRRLAKVPQPLKITQAGHVGIGC*MLL*FS*NPNIVQNLTID*GWLRLGKLWPAFNTLF 5758
Range 4: 5188 to 5760 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
439.6 bits(953) | 0.0 | 190/191(99%) | 0/191(0%) | Plus/Plus |
Query 142 WFKTHIPLSNLESTRARWVGKMALKEYREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVSMFHEAVQEFEXXXXXXXXXTIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL 714 WFKTHIPLSNLESTRARWVGKMALKEYREVRCGYE TQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVSMFHEAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL Subject 5188 WFKTHIPLSNLESTRARWVGKMALKEYREVRCGYEATQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVSMFHEAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL 5760
Range 5: 5080 to 5136 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.5 bits(106) | 0.0 | 19/19(100%) | 0/19(0%) | Plus/Plus |
Query 34 REEKLCGDPWLKVMLFLGQ 90 REEKLCGDPWLKVMLFLGQ Subject 5080 REEKLCGDPWLKVMLFLGQ 5136
Range 6: 5080 to 5760 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
467.1 bits(1013) | 0.0 | 221/227(97%) | 0/227(0%) | Minus/Minus |
Query 34 QNSVLKAGQSLPSLSHP*SIVKFCTMLGFHENQSNI*QPIPT*PA*VIFNGCSTFASXXXXXXXXXXXXHTDIVASIQWDF**ESVEQEFSVRLCTP*LRSFHLWL*KLQAFSDGHQKSDGVITLMSRINALKTLTSIAQLLTHAPPVFIEELLSCLIPTPYLTILFQSHFPNPSSPG*LQIAQGYVCFEPFFI*TLRLELFNFTVFILA*EKHNF*PRITTQLFLS 714 QNSVLKAGQSLPSLSHP*SIVKFCTMLGFHEN SNI*QPIPT*PA*VIFNGC TFASLLCLKLLHCLMKHTDIVASIQWDF**ESVEQEFSVRLCTP*LRSFHLWL*KLQAFSDGH K DGVITLMSRINALKTLTSIAQLLTHAPPVFIEELLSCLIPT YLTILFQSHFPNPSSPG*LQIAQGYVCFEPFFI*TLRL+LFNFTVFILA*EKHNF*PRITTQLFLS Subject 5080 QNSVLKAGQSLPSLSHP*SIVKFCTMLGFHEN*SNI*QPIPT*PA*VIFNGCGTFASLLCLKLLHCLMKHTDIVASIQWDF**ESVEQEFSVRLCTP*LRSFHLWL*KLQAFSDGH*KGDGVITLMSRINALKTLTSIAQLLTHAPPVFIEELLSCLIPTSYLTILFQSHFPNPSSPG*LQIAQGYVCFEPFFI*TLRLKLFNFTVFILA*EKHNF*PRITTQLFLS 5760
Range 7: 5187 to 5759 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
424.5 bits(920) | 0.0 | 190/191(99%) | 0/191(0%) | Minus/Minus |
Query 141 KTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE*FSMVXXXXXXXXASNSCTAS*NILTLWLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPMPPLCSSKNC*VVSYPHRTSRYSFKAIFPTHLALVDSRLLKGMCVLNH 713 KTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE*FSMVAALLLAFFASNSCTAS*NILTLWLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPMPPLCSSKNC*V SYPHRTSRYSFKAIFPTHLALVDSRLLKGMCVLNH Subject 5187 KTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE*FSMVAALLLAFFASNSCTAS*NILTLWLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPMPPLCSSKNC*VASYPHRTSRYSFKAIFPTHLALVDSRLLKGMCVLNH 5759
Grapevine rupestris stem pitting associated virus isolate CS BR, complete genome
Sequence ID: KX958435.1 Length: 8743 Number of Matches: 8
Range 1: 5079 to 5759 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
483.6 bits(1049) | 0.0 | 198/227(87%) | 0/227(0%) | Minus/Minus |
Query 32 KQRVESRPKFAQP*PPLIYCQILYNVGIS*KSKQHLAANPDMTCLSDFQWLQHFC*PSLPQTPALPHETY*HCG*HSMGLLIGKCRAGIFRKALHALASQLPPVALKTSSVFGRPSKK*WSHYPYV*DKCSQNAHKHCSIAHPCPPCVHRRIAELSHTHTVPHDTLSKPFSQPI*PWLTPDCSRVCVF*TILHLNTQTRALQLHSLHPGLRKA*LLATDHHTAFPLV 712 KQR ESRPKFAQP*PPLIYCQILYNVGIS*+ KQHLAANP MTCLSDFQWLQHFC*PSLPQTPALPHETY*HCG*H MGL IGKC+AGI KALHALASQLPPVALKTS VFGRP K+*WSH P V*DKC QN H+HC IA P PPCVHRRIAEL HTH VPH S+PFSQPI*PWLTP+CSRVCVF*TILHLNTQT+ALQLHS HPGLRKA*LLATDHHTAFPLV Subject 5079 KQRAESRPKFAQP*PPLIYCQILYNVGIS*RLKQHLAANPGMTCLSDFQWLQHFC*PSLPQTPALPHETY*HCG*HLMGLSIGKCQAGISHKALHALASQLPPVALKTSGVFGRPLKR*WSHCPCV*DKCFQNVHRHCLIARPFPPCVHRRIAELFHTHIVPHGAPSRPFSQPI*PWLTPNCSRVCVF*TILHLNTQTQALQLHSPHPGLRKA*LLATDHHTAFPLV 5759
Range 2: 5189 to 5761 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
438.2 bits(950) | 0.0 | 189/191(99%) | 0/191(0%) | Plus/Plus |
Query 142 WFKTHIPLSNLESTRARWVGKMALKEYREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVSMFHEAVQEFEXXXXXXXXXTIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL 714 WFKTHIPLSNLESTRARWVGKMALKE+REVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNV+MFHEAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL Subject 5189 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVNMFHEAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL 5761
Range 3: 5081 to 5137 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.5 bits(106) | 0.0 | 19/19(100%) | 0/19(0%) | Plus/Plus |
Query 34 REEKLCGDPWLKVMLFLGQ 90 REEKLCGDPWLKVMLFLGQ Subject 5081 REEKLCGDPWLKVMLFLGQ 5137
Range 4: 5188 to 5760 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
417.6 bits(905) | 0.0 | 187/191(98%) | 0/191(0%) | Minus/Minus |
Query 141 KTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE*FSMVXXXXXXXXASNSCTAS*NILTLWLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPMPPLCSSKNC*VVSYPHRTSRYSFKAIFPTHLALVDSRLLKGMCVLNH 713 KTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE*FSMVAALLLAFFASNSCTAS*NILTLWLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENF+RFRTAIKKVMESLPLCLG*MLSKRSQALLNCSP+PPLCSSKNC*VVSYPHRTSR SFKAIFPTHLALVDS+LLKGMCVLNH Subject 5188 KTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE*FSMVAALLLAFFASNSCTAS*NILTLWLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFRRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPIPPLCSSKNC*VVSYPHRTSRCSFKAIFPTHLALVDSKLLKGMCVLNH 5760
Range 5: 5071 to 5136 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.4 bits(108) | 0.0 | 20/22(91%) | 0/22(0%) | Minus/Minus |
Query 24 WPKKSITFSHGSPHSFSSRHTS 89 WPKKSITFSHGSPHSFSSR S Subject 5071 WPKKSITFSHGSPHSFSSRTPS 5136
Range 6: 5082 to 5759 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
440.0 bits(954) | 0.0 | 201/226(89%) | 0/226(0%) | Plus/Plus |
Query 35 ERKSCVVIRG*KLCFS*ARMKTXXXXXXXXXXQMKNGSKHTYP*AIWSQPGLDGLGKWL*KSIVRYGVGMRQLSNSSMNTGGAWVSN*AMLVSVLRAFILDIRVMTPSLF*WPSENA*SFQSHRWKLRS*GVQSLTENSCSTLSYQKSH*MLATMSVCFMRQCRSLRQRRLAKVLQPLKITQAGHVGIGC*MLL*FS*NPNIVQNLTID*GWLRLGKLWPAFNTLF 712 ERKSCVVIRG*KLCFS*ARM+TVKLKS SLSVQMKNGSKHTYP*AIWSQPGLDGLGKW *+S VRY VGM+QLSNSSMNTGG W SN*AM V+VL+AFILD R MTP F*WPSENA*SFQSHRWKLRS*GVQSL NSC TLSY+KSH*MLATM +CFMRQCRSLRQRRLAKVLQPLKITQAGH GIGC*MLL* S*NPNIVQNLTID*GWLRLGKLWPAF+TLF Subject 5082 ERKSCVVIRG*KLCFS*ARMRTVKLKSLSLSVQMKNGSKHTYP*AIWSQPGLDGLGKWP*RSTVRYDVGMKQLSNSSMNTGGEWASN*AMPVNVLKAFILDTRAMTPLPF*WPSENA*SFQSHRWKLRS*GVQSLMGNSCLTLSYRKSH*MLATMLICFMRQCRSLRQRRLAKVLQPLKITQAGHAGIGC*MLL*SS*NPNIVQNLTID*GWLRLGKLWPAFSTLF 5759
Range 7: 5080 to 5760 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
439.6 bits(953) | 0.0 | 197/227(87%) | 0/227(0%) | Plus/Plus |
Query 33 TRGKAVW*SVAKSYAFLRPG*RL*S*RARV*VFK*RMVQNTHTLEQSGVNQG*MGWENGFERVS*GTVWV*DNSAILR*TQGGHG*AIEQCL*AF*EHLS*T*G**LHHFFDGRPKTLEVFKATGGSCEAKACKALRKIPARHFPIKSPIEC*PQCQYVS*GSAGV*GKEG*QKCCNH*KSLRQVMSGLAARCCFDFHEIPTLYKI*Q*IKGG*GWANFGLLSTRCF 713 TRGKAVW*SVAKSYAFLRPG* L*S*RA V*VFK*RMVQNTHTLEQ GVNQG*MGWENG E *GT+WV*+NSAILR*TQGG+G AI+QCL* F*+HLS*T G *LH+ F+GRPKT EVFKATGGSCEAKACKAL +IPA HFPI+SPI+C*PQC YVS*GSAGV*GKEG*QKCCNH*KSLRQVM GLAARCCF+ HEIPTLYKI*Q*IKGG*GWANFGLLS RCF Subject 5080 TRGKAVW*SVAKSYAFLRPG*GL*S*RA*V*VFK*RMVQNTHTLEQFGVNQG*MGWENGLEGAP*GTMWV*NNSAILR*TQGGNGRAIKQCL*TF*KHLS*TQGQ*LHYLFNGRPKTPEVFKATGGSCEAKACKALWEIPA*HFPIESPIKC*PQC*YVS*GSAGV*GKEG*QKCCNH*KSLRQVMPGLAARCCFNLHEIPTLYKI*Q*IKGG*GWANFGLLSARCF 5760
Range 8: 5081 to 5761 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
419.0 bits(908) | 0.0 | 199/227(88%) | 0/227(0%) | Minus/Minus |
Query 34 QNSVLKAGQSLPSLSHP*SIVKFCTMLGFHENQSNI*QPIPT*PA*VIFNGCSTFASXXXXXXXXXXXXHTDIVASIQWDF**ESVEQEFSVRLCTP*LRSFHLWL*KLQAFSDGHQKSDGVITLMSRINALKTLTSIAQLLTHAPPVFIEELLSCLIPTPYLTILFQSHFPNPSSPG*LQIAQGYVCFEPFFI*TLRLELFNFTVFILA*EKHNF*PRITTQLFLS 714 QNSVLKAGQSLPSLSHP*SIVKFCTMLGFHE+ SNI*QPIP *PA*VIFNGCSTFASLLCLKLLHCLMKH +IVASI WDF *ESV+QEF +RLCTP*LRSFHLWL*KLQAFSDGH K +GVI L+SRINA KT T IA LL H+PPVFIEELLSC IPT YLT+L Q HFPNPSSPG*LQIAQGYVCFEPFFI*TLRL+LFNFTV ILA*EKHNF*PRITTQLFLS Subject 5081 QNSVLKAGQSLPSLSHP*SIVKFCTMLGFHED*SNI*QPIPA*PA*VIFNGCSTFASLLCLKLLHCLMKHINIVASI*WDFR*ESVKQEFPIRLCTP*LRSFHLWL*KLQAFSDGH*KGNGVIALVSRINAFKTFTGIA*LLAHSPPVFIEELLSCFIPTSYLTVLLQGHFPNPSSPG*LQIAQGYVCFEPFFI*TLRLKLFNFTVLILA*EKHNF*PRITTQLFLS 5761
Grapevine rupestris stem pitting associated virus isolate VF1, partial genome
Sequence ID: KT948710.1 Length: 8716 Number of Matches: 9
Range 1: 5189 to 5761 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
436.4 bits(946) | 0.0 | 188/191(98%) | 0/191(0%) | Plus/Plus |
Query 142 WFKTHIPLSNLESTRARWVGKMALKEYREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVSMFHEAVQEFEXXXXXXXXXTIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL 714 WFKTHIPLSNLESTRARWVGKMALKEYREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPL+ASHN +MFHEAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL Subject 5189 WFKTHIPLSNLESTRARWVGKMALKEYREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLSASHNTNMFHEAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL 5761
Range 2: 5081 to 5137 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.5 bits(106) | 0.0 | 19/19(100%) | 0/19(0%) | Plus/Plus |
Query 34 REEKLCGDPWLKVMLFLGQ 90 REEKLCGDPWLKVMLFLGQ Subject 5081 REEKLCGDPWLKVMLFLGQ 5137
Range 3: 5079 to 5759 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
458.4 bits(994) | 0.0 | 190/227(84%) | 0/227(0%) | Minus/Minus |
Query 32 KQRVESRPKFAQP*PPLIYCQILYNVGIS*KSKQHLAANPDMTCLSDFQWLQHFC*PSLPQTPALPHETY*HCG*HSMGLLIGKCRAGIFRKALHALASQLPPVALKTSSVFGRPSKK*WSHYPYV*DKCSQNAHKHCSIAHPCPPCVHRRIAELSHTHTVPHDTLSKPFSQPI*PWLTPDCSRVCVF*TILHLNTQTRALQLHSLHPGLRKA*LLATDHHTAFPLV 712 K+R ESRPK AQP PPLIYCQIL NVGIS*+ KQHLA NPDMTCLSDFQWLQHFC PSL QTP LPH TY +CG*H MGLLIG+C+AGI KALHALASQLPPVAL+TSSV GRPSK+* SH PYV*DKCSQN HKHCSIA P PPCVHRRIAELSHTH VPH TLS+PFSQPI*PWLTPDCS+VCVF*TILHLNTQ +ALQLHSLHP LRKA*LL DH TAFPLV Subject 5079 KRRAESRPKSAQPWPPLIYCQILCNVGIS*RLKQHLATNPDMTCLSDFQWLQHFCSPSLLQTPELPHGTYWYCG*HLMGLLIGRCQAGISHKALHALASQLPPVALRTSSVSGRPSKR**SHCPYV*DKCSQNVHKHCSIARPSPPCVHRRIAELSHTHIVPHGTLSRPFSQPI*PWLTPDCSKVCVF*TILHLNTQLQALQLHSLHPVLRKA*LLTKDHRTAFPLV 5759
Range 4: 5188 to 5760 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
408.0 bits(884) | 0.0 | 184/191(96%) | 0/191(0%) | Minus/Minus |
Query 141 KTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE*FSMVXXXXXXXXASNSCTAS*NILTLWLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPMPPLCSSKNC*VVSYPHRTSRYSFKAIFPTHLALVDSRLLKGMCVLNH 713 KTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSS+QSRHDLPE*FSMVAALLLAFFASNS TAS NIL LWLA NGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKV+ESLPLCLG*MLSKRSQALLNCSP+PPLCSSKNC*VVSYPHRTSRYSFKAIFPTHLALVDSRLLKGMCVLNH Subject 5188 KTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSNQSRHDLPE*FSMVAALLLAFFASNS*TASWNILVLWLALNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVIESLPLCLG*MLSKRSQALLNCSPIPPLCSSKNC*VVSYPHRTSRYSFKAIFPTHLALVDSRLLKGMCVLNH 5760
Range 5: 5071 to 5133 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
42.3 bits(86) | 0.0 | 17/21(81%) | 0/21(0%) | Minus/Minus |
Query 24 PKKSITFSHGSPHSFSSRHTS 86 PKKSITF+ GSPHSFSSR S Subject 5071 PKKSITFNQGSPHSFSSRTPS 5133
Range 6: 5080 to 5760 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
418.5 bits(907) | 0.0 | 191/227(84%) | 0/227(0%) | Plus/Plus |
Query 33 TRGKAVW*SVAKSYAFLRPG*RL*S*RARV*VFK*RMVQNTHTLEQSGVNQG*MGWENGFERVS*GTVWV*DNSAILR*TQGGHG*AIEQCL*AF*EHLS*T*G**LHHFFDGRPKTLEVFKATGGSCEAKACKALRKIPARHFPIKSPIEC*PQCQYVS*GSAGV*GKEG*QKCCNH*KSLRQVMSGLAARCCFDFHEIPTLYKI*Q*IKGG*GWANFGLLSTRCF 713 TRGKAV *S+ KSYAFLR G*RL*S*RA *VFK*RMVQNTHT EQSGVNQG*MGWENG ERV *GT+WV*DNSAILR*TQGG G AIEQCL* F*EHLS*T*G *L+H FDGRP+TLEV KATGGSCEAKACKAL +IPA H PIKSPI+C*PQ QYV *GS+GV* KEG QKCCNH*KSLRQVMSGL ARCCF+ HEIPTL+KI*Q*IKGG GWA+FGLLS R F Subject 5080 TRGKAVR*SLVKSYAFLRTG*RL*S*RA*S*VFK*RMVQNTHTFEQSGVNQG*MGWENGLERVP*GTMWV*DNSAILR*TQGGDGRAIEQCL*TF*EHLS*T*GQ*LYHLFDGRPETLEVLKATGGSCEAKACKALWEIPA*HLPIKSPIKC*PQYQYVP*GSSGV*SKEGEQKCCNH*KSLRQVMSGLVARCCFNLHEIPTLHKI*Q*IKGGQGWADFGLLSARRF 5760
Range 7: 5082 to 5759 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
405.2 bits(878) | 0.0 | 191/226(85%) | 0/226(0%) | Plus/Plus |
Query 35 ERKSCVVIRG*KLCFS*ARMKTXXXXXXXXXXQMKNGSKHTYP*AIWSQPGLDGLGKWL*KSIVRYGVGMRQLSNSSMNTGGAWVSN*AMLVSVLRAFILDIRVMTPSLF*WPSENA*SFQSHRWKLRS*GVQSLTENSCSTLSYQKSH*MLATMSVCFMRQCRSLRQRRLAKVLQPLKITQAGHVGIGC*MLL*FS*NPNIVQNLTID*GWLRLGKLWPAFNTLF 712 ERKSC VI G*KLCFS* RMKTVKLKS LSVQMKNGSKHTY *AIWSQPGLDGLGKW *KS VRY VGMRQLSNSSMNTGG W SN*AMLV+VLRAFILDIR MT S F*WPS NA*S QSHRWKLRS*GVQSL NSC T SYQKSH*+LAT+ +C MRQ RSL+QRR AKVLQPLKITQAGHVGIGC*MLL* S*NPNI QNLTID*GW RLG+LWPAF+T F Subject 5082 ERKSCAVILG*KLCFS*DRMKTVKLKSLKLSVQMKNGSKHTYL*AIWSQPGLDGLGKWP*KSTVRYDVGMRQLSNSSMNTGGGWASN*AMLVNVLRAFILDIRAMTLSPF*WPSGNA*SSQSHRWKLRS*GVQSLMGNSCLTPSYQKSH*VLATIPICSMRQFRSLKQRRRAKVLQPLKITQAGHVGIGC*MLL*SS*NPNIAQNLTID*GWPRLGRLWPAFSTPF 5759
Range 8: 5081 to 5545 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
305.3 bits(660) | 0.0 | 132/155(85%) | 0/155(0%) | Minus/Minus |
Query 34 IVASIQWDF**ESVEQEFSVRLCTP*LRSFHLWL*KLQAFSDGHQKSDGVITLMSRINALKTLTSIAQLLTHAPPVFIEELLSCLIPTPYLTILFQSHFPNPSSPG*LQIAQGYVCFEPFFI*TLRLELFNFTVFILA*EKHNF*PRITTQLFLS 498 IVAS WDF**E V+QEF +RLCTP*LRSFHLWL*+LQAF DGHQK D VI LMSRINALKT TSIAQLL H PPVFIEELLSCLIPT YLT+LFQ HFPNPSSPG*LQIAQ YVCFEPFFI*TL +LFNFTVFIL+*EKHNF*PRIT QLFLS Subject 5081 IVAST*WDF**EGVKQEFPIRLCTP*LRSFHLWL*ELQAFPDGHQKGDRVIALMSRINALKTFTSIAQLLAHPPPVFIEELLSCLIPTSYLTVLFQGHFPNPSSPG*LQIAQRYVCFEPFFI*TLSFKLFNFTVFILS*EKHNF*PRITAQLFLS 5545
Range 9: 5594 to 5761 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
117.9 bits(251) | 0.0 | 51/56(91%) | 0/56(0%) | Minus/Minus |
Query 547 QNSVLKAGQSLPSLSHP*SIVKFCTMLGFHENQSNI*QPIPT*PA*VIFNGCSTFA 714 QN VLKAGQSLPSL HP*SIVKFC MLGFHE+ SNI*QPIPT*PA*VIFNGCSTFA Subject 5594 QNGVLKAGQSLPSLGHP*SIVKFCAMLGFHED*SNI*QPIPT*PA*VIFNGCSTFA 5761
Grapevine rupestris stem pitting associated virus isolate GRSPaV JF, complete genome
Sequence ID: KR054734.1 Length: 8753 Number of Matches: 8
Range 1: 5188 to 5760 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
435.0 bits(943) | 0.0 | 188/191(98%) | 0/191(0%) | Plus/Plus |
Query 142 WFKTHIPLSNLESTRARWVGKMALKEYREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVSMFHEAVQEFEXXXXXXXXXTIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL 714 WFKTHIPLSNLESTRARWVGKMALKE+REVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNV+MF+EAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL Subject 5188 WFKTHIPLSNLESTRARWVGKMALKEHREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVNMFNEAVQEFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL 5760
Range 2: 5080 to 5136 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.5 bits(106) | 0.0 | 19/19(100%) | 0/19(0%) | Plus/Plus |
Query 34 REEKLCGDPWLKVMLFLGQ 90 REEKLCGDPWLKVMLFLGQ Subject 5080 REEKLCGDPWLKVMLFLGQ 5136
Range 3: 5187 to 5759 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
397.4 bits(861) | 0.0 | 180/191(94%) | 0/191(0%) | Minus/Minus |
Query 141 KTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE*FSMVXXXXXXXXASNSCTAS*NILTLWLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPMPPLCSSKNC*VVSYPHRTSRYSFKAIFPTHLALVDSRLLKGMCVLNH 713 KTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE*FS+VAALLLAF ASNS TAS NILTLWLAFNGTFD+ VSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLS SQALLNCSP+PPLCSSKNC*VVSYP RTSR SFKAIFPTHLALVDSRLLKGMCVLNH Subject 5187 KTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE*FSIVAALLLAFLASNS*TASLNILTLWLAFNGTFDKNVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSNLSQALLNCSPIPPLCSSKNC*VVSYPQRTSRCSFKAIFPTHLALVDSRLLKGMCVLNH 5759
Range 4: 5082 to 5135 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
46.9 bits(96) | 0.0 | 17/18(94%) | 0/18(0%) | Minus/Minus |
Query 36 WPKKSITFSHGSPHSFSS 89 WPKKSIT SHGSPHSFSS Subject 5082 WPKKSITLSHGSPHSFSS 5135
Range 5: 5084 to 5758 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
399.7 bits(866) | 0.0 | 170/225(76%) | 0/225(0%) | Minus/Minus |
Query 38 KQRVESRPKFAQP*PPLIYCQILYNVGIS*KSKQHLAANPDMTCLSDFQWLQHFC*PSLPQTPALPHETY*HCG*HSMGLLIGKCRAGIFRKALHALASQLPPVALKTSSVFGRPSKK*WSHYPYV*DKCSQNAHKHCSIAHPCPPCVHRRIAELSHTHTVPHDTLSKPFSQPI*PWLTPDCSRVCVF*TILHLNTQTRALQLHSLHPGLRKA*LLATDHHTAFP 712 ++RVESRPKFAQP*PP IYCQILYNVGIS*K K+HL ANPDMTCL+D LQHFC*P QTP LPH TY*HCG*HSM LL C+A IF KAL ALA Q P VALKT + G+P KK*W+HYPYV* KC Q HKHC IA P P CVHRR AELSHT PH LS+PFS+PI*PWLTPDCSRVCVF*TILHLNTQT+ALQLH+LHPGLRKA*L A HHT FP Subject 5084 RRRVESRPKFAQP*PPSIYCQILYNVGIS*KLKRHLVANPDMTCLNDSL*LQHFC*PF*LQTPELPH*TY*HCG*HSMELLTKMCQAEIFHKALRALALQPPLVALKTLNASGQPLKK*WNHYPYV*GKCFQIFHKHCLIARPYPLCVHRRTAELSHTRNAPHGALSRPFSRPI*PWLTPDCSRVCVF*TILHLNTQTQALQLHNLHPGLRKA*L*AMGHHTVFP 5758
Range 6: 5083 to 5760 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
371.3 bits(804) | 0.0 | 172/226(76%) | 0/226(0%) | Minus/Minus |
Query 37 QNSVLKAGQSLPSLSHP*SIVKFCTMLGFHENQSNI*QPIPT*PA*VIFNGCSTFASXXXXXXXXXXXXHTDIVASIQWDF**ESVEQEFSVRLCTP*LRSFHLWL*KLQAFSDGHQKSDGVITLMSRINALKTLTSIAQLLTHAPPVFIEELLSCLIPTPYLTILFQSHFPNPSSPG*LQIAQGYVCFEPFFI*TLRLELFNFTVFILA*EKHNF*PRITTQLFL 714 Q+ VLKAGQSLPSLSHP SIVKFCTMLGFHEN S+I* PIPT*PA*+I CSTFASL KLL+CL++H DIVASIQW+F* + V+Q+FS+RLC P*L S HLWL*KL D H KSDG+ITLMSR+NA K+ TSIA LL H P VFIEELLSCLIP +LT+LFQ HFP+PSSPG*LQIAQGYVCFEPFFI*TLRL+LFNFT+FILA*EKHNF P +TTQ FL Subject 5083 QDGVLKAGQSLPSLSHPQSIVKFCTMLGFHEN*SDI**PIPT*PA*MILYSCSTFASLFSFKLLNCLIEHIDIVASIQWNF*QKCVKQKFSIRLCAP*LCSLHLWL*KL*TLPDSH*KSDGIITLMSRVNAFKSFTSIA*LLAHTPSVFIEELLSCLIPATHLTVLFQGHFPDPSSPG*LQIAQGYVCFEPFFI*TLRLKLFNFTIFILA*EKHNFKPWVTTQFFL 5760
Range 7: 5085 to 5753 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
365.3 bits(791) | 0.0 | 171/223(77%) | 0/223(0%) | Plus/Plus |
Query 39 GKAVW*SVAKSYAFLRPG*RL*S*RARV*VFK*RMVQNTHTLEQSGVNQG*MGWENGFERVS*GTVWV*DNSAILR*TQGGHG*AIEQCL*AF*EHLS*T*G**LHHFFDGRPKTLEVFKATGGSCEAKACKALRKIPARHFPIKSPIEC*PQCQYVS*GSAGV*GKEG*QKCCNH*KSLRQVMSGLAARCCFDFHEIPTLYKI*Q*IKGG*GWANFGLLSTR 707 GK VW* +A SYAFLRPG*RL*S*RA V*VFK*RMVQNTHTLEQSGVNQG*MG ENG ER *G + V*DNSA+LR*TQ G+G AI+QCL* *+HL *T*G** HHFF+G P+ +VFKAT G C+AKA KAL KI A H +KS IEC*PQCQYV *GS+GV* +G*QKCCN+ +S RQVMSGLA RC F+FHEIPTLYKI*Q*I+GG*GWANFGLLSTR Subject 5085 GKTVW*PMA*SYAFLRPG*RL*S*RA*V*VFK*RMVQNTHTLEQSGVNQG*MGRENGLERAP*GALRV*DNSAVLR*TQRGYGRAIKQCL*KI*KHLP*T*G**FHHFFNGCPEAFKVFKATSGGCKAKARKALWKISA*HIFVKSSIEC*PQCQYVQ*GSSGV*S*KG*QKCCNYRESFRQVMSGLATRCRFNFHEIPTLYKI*Q*IEGG*GWANFGLLSTR 5753
Range 8: 5084 to 5752 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
362.6 bits(785) | 0.0 | 175/223(78%) | 0/223(0%) | Plus/Plus |
Query 38 RKSCVVIRG*KLCFS*ARMKTXXXXXXXXXXQMKNGSKHTYP*AIWSQPGLDGLGKWL*KSIVRYGVGMRQLSNSSMNTGGAWVSN*AMLVSVLRAFILDIRVMTPSLF*WPSENA*SFQSHRWKLRS*GVQSLTENSCSTLSYQKSH*MLATMSVCFMRQCRSLRQRRLAKVLQPLKITQAGHVGIGC*MLL*FS*NPNIVQNLTID*GWLRLGKLWPAFNT 706 RK+CVV G KLCFS*ARMK VKLKS SLSVQMKNGSKHTYP*AIWSQPGLDG GKW *KS VR GMRQLS+SSMNT G W SN*AMLV L+AF LDIRVM PSLF*W S + *SFQSH+W+L+S*G QSL EN C T QK H*MLATMS+C MRQ RSL+ +RLAKVLQ +I QAGHVGIG *M L*FS*NPNIVQNLTID*GWLRLGKLWPAFNT Subject 5084 RKNCVVTHGLKLCFS*ARMKIVKLKSLSLSVQMKNGSKHTYP*AIWSQPGLDGSGKWP*KSTVRCVAGMRQLSSSSMNTEGVWASN*AMLVKDLKAFTLDIRVMIPSLF*WLSGSV*SFQSHKWRLQS*GAQSLMENFCLTHFCQKFH*MLATMSICSMRQFRSLKLKRLAKVLQL*RIIQAGHVGIGY*MSL*FS*NPNIVQNLTID*GWLRLGKLWPAFNT 5752
Grapevine rupestris stem pitting associated virus isolate SK704 C, complete genome
Sequence ID: KX274276.1 Length: 8726 Number of Matches: 9
Range 1: 5189 to 5761 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
425.4 bits(922) | 0.0 | 184/191(96%) | 0/191(0%) | Plus/Plus |
Query 142 WFKTHIPLSNLESTRARWVGKMALKEYREVRCGYETTQQFFDEHRGGMGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDTFLSKVPLNASHNVSMFHEAVQEFEXXXXXXXXXTIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL 714 WFKTHIPLSNLESTRARWVGKMALKEYREVRCGYE TQQFFDEHRGG GEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLD+FLSKVPLNASHN MF+EAV+EFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL Subject 5189 WFKTHIPLSNLESTRARWVGKMALKEYREVRCGYEVTQQFFDEHRGGAGEQLSNACERFESIYPRHKGNDSITFLMAVRKRLKFSKPQVEAAKLRRAKPYGKFLLDSFLSKVPLNASHNSKMFNEAVREFEAKKASKSAATIENHSGRSCRDWLLDVALIFMKSQHCTKFDNRLRVAKAGQTLACFQHAVL 5761
Range 2: 5081 to 5137 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
51.5 bits(106) | 0.0 | 19/19(100%) | 0/19(0%) | Plus/Plus |
Query 34 REEKLCGDPWLKVMLFLGQ 90 REEKLCGDPWLKVMLFLGQ Subject 5081 REEKLCGDPWLKVMLFLGQ 5137
Range 3: 5188 to 5760 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
322.3 bits(697) | 0.0 | 153/191(80%) | 0/191(0%) | Minus/Minus |
Query 141 KTAC*KQAKVCPALATLNLLSNFVQCWDFMKIKATSSSQSRHDLPE*FSMVXXXXXXXXASNSCTAS*NILTLWLAFNGTFDRKVSSRNFP*GFARLSFAASTCGFENFKRFRTAIKKVMESLPLCLG*MLSKRSQALLNCSPMPPLCSSKNC*VVSYPHRTSRYSFKAIFPTHLALVDSRLLKGMCVLNH 713 KTAC*KQA+VCPALATL+LLSN VQC DF+KI+ATS+SQS HDLPE FS+VAALLLAFFASNS TAS NIL L LAF+GT DRK SS+NFP GFARLS AAST GFEN +RFRTAI+KVMES PLCLG*MLS S ALL+CSP PPLCSSKNC*V S P RTSRYSFKAI PTHLALVDS+LL+G+ VLNH Subject 5188 KTAC*KQARVCPALATLSLLSNLVQCCDFIKIRATSNSQSLHDLPEWFSIVAALLLAFFASNSRTASLNILEL*LAFSGTLDRKESSKNFPYGFARLSLAASTWGFENLRRFRTAIRKVMESFPLCLG*MLSNLSHALLSCSPAPPLCSSKNC*VTS*PQRTSRYSFKAILPTHLALVDSKLLRGIWVLNH 5760
Range 4: 5083 to 5133 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
41.8 bits(85) | 0.0 | 15/17(88%) | 0/17(0%) | Minus/Minus |
Query 36 PKKSITFSHGSPHSFSS 86 P+KSITFSHGSPH+FSS Subject 5083 PRKSITFSHGSPHNFSS 5133
Range 5: 5082 to 5759 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
227.0 bits(489) | 0.0 | 124/226(55%) | 0/226(0%) | Plus/Plus |
Query 35 ERKSCVVIRG*KLCFS*ARMKTXXXXXXXXXXQMKNGSKHTYP*AIWSQPGLDGLGKWL*KSIVRYGVGMRQLSNSSMNTGGAWVSN*AMLVSVLRAFILDIRVMTPSLF*WPSENA*SFQSHRWKLRS*GVQSLTENSCSTLSYQKSH*MLATMSVCFMRQCRSLRQRRLAKVLQPLKITQAGHVGIGC*MLL*FS*NPNIVQNLTID*GWLRLGKLWPAFNTLF 712 ER+SCVVI G*KLCFS +M+ VKLK + QMKNGSK +P*AIWSQP G +W *KSIVR V MR LSNS M+T VSN*AM V L+AF I+ M P W EN +FQS RWK +*G QS +S LS + H*M T+ C MRQC S +QR+L +V + + QAGH GIGC MLL*F *+ +I NLTI GWL+LG+ AFNTLF Subject 5082 ERRSCVVIHG*KLCFSWVKMRIVKLKRWKWNAQMKNGSKPIFP*AIWSQPEPGGWVRWP*KSIVRCAVVMR*LSNSLMSTEVVLVSN*AMHVKDLKAFTQGIKEMIP*PSLWLFENVSNFQSPRWKQPN*GEQSHMGSSY*ILSCLRCH*MPVTIPKCSMRQCGSSKQRKLVRVQRL*RTIQAGHAGIGCWMLL*FL*SRSIAPNLTIGLGWLKLGRPLLAFNTLF 5759
Range 6: 5082 to 5759 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
223.3 bits(481) | 0.0 | 113/226(50%) | 0/226(0%) | Minus/Minus |
Query 35 KQRVESRPKFAQP*PPLIYCQILYNVGIS*KSKQHLAANPDMTCLSDFQWLQHFC*PSLPQTPALPHETY*HCG*HSMGLLIGKCRAGIFRKALHALASQLPPVALKTSSVFGRPSKK*WSHYPYV*DKCSQNAHKHCSIAHPCPPCVHRRIAELSHTHTVPHDTLSKPFSQPI*PWLTPDCSRVCVF*TILHLNTQTRALQLHSLHPGLRKA*LLATDHHTAFPL 712 KQRVES+ AQ *PP YCQI N S*K +QH ANP MTCL+ H * SL +TPALPH T+ +C H + GK AL AL LPP ALK VF +P + W+H+ Y KC Q H HCS+AH C H+RIAEL H H+ PHDTL +P P WLTP+C F*TILHL+ +LQLH+ H KA*LLA DHHT PL Subject 5082 KQRVESKQGSAQL*PP*AYCQIWCNAATS*KLEQHPTANPCMTCLNGSL*SLHSY*LSLLRTPALPH*TFWNCDWHLVAP*TGKNLVRTSHMALLALVWLLPPGALKI*DVFEQP*GRLWNHFLYALGKCFQIFHMHCSVAHQHHLCAHQRIAELPHNHSAPHDTLLRPSYPPTWLWLTPNCLGEYGF*TILHLSIPFPSLQLHNPHLDPGKA*LLAMDHHTTSPL 5759
Range 7: 5072 to 5545 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
172.0 bits(369) | 0.0 | 84/158(53%) | 0/158(0%) | Minus/Minus |
Query 25 IVASIQWDF**ESVEQEFSVRLCTP*LRSFHLWL*KLQAFSDGHQKSDGVITLMSRINALKTLTSIAQLLTHAPPVFIEELLSCLIPTPYLTILFQSHFPNPSSPG*LQIAQGYVCFEPFFI*TLRLELFNFTVFILA*EKHNF*PRITTQLFLSSHL 498 IV I W E + E + LC+P* FHL L*K + FS+ H++ G+I+ M +NA K+ T IAQLLT V I+ELLS LI T +LTILF H +P G*LQIA G + FEPFFI* LFNFT+ IL EKHNF*P ITTQL LS+ L Subject 5072 IVTGI*WHLRQERI**ELPIWLCSP*FGCFHLGL*KFETFSNSHKEGYGIISFMPWVNAFKSFTCIAQLLTSTTSVLIKELLSYLITTAHLTILF*GHLTHPPGSG*LQIA*GNMGFEPFFI*AFHFHLFNFTILILTQEKHNF*PWITTQLLLSNSL 5545
Range 8: 5591 to 5761 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
71.2 bits(149) | 0.0 | 34/57(60%) | 0/57(0%) | Minus/Minus |
Query 544 QNSVLKAGQSLPSLSHP*SIVKFCTMLGFHENQSNI*QPIPT*PA*VIFNGCSTFAS 714 QNSVLKA + LPS SHP IVKF ML H+N SNI QPIP *PA*++ T S Subject 5591 QNSVLKASKGLPSFSHPKPIVKFGAMLRLHKN*SNIQQPIPA*PA*MVLYSRCTLTS 5761
Range 9: 5083 to 5760 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
214.6 bits(462) | 0.0 | 116/226(51%) | 0/226(0%) | Plus/Plus |
Query 36 RGKAVW*SVAKSYAFLRPG*RL*S*RARV*VFK*RMVQNTHTLEQSGVNQG*MGWENGFERVS*GTVWV*DNSAILR*TQGGHG*AIEQCL*AF*EHLS*T*G**LHHFFDGRPKTLEVFKATGGSCEAKACKALRKIPARHFPIKSPIEC*PQCQYVS*GSAGV*GKEG*QKCCNH*KSLRQVMSGLAARCCFDFHEIPTLYKI*Q*IKGG*GWANFGLLSTRCF 713 RG+ VW*S+AKSYAF * L*S*R + K*RMVQN ++ +Q GVNQ +G +G +RVS*G +W+* NSAIL * Q *A EQC+* *+HL * * H+ G KT ++FKA GGS + KA KA+ ++ R FP+ +C Q Q V *GSAGV KE * +C ++ + RQVM GLA CC +F+E+ L++I*Q* GG* WA+ LLSTRCF Subject 5083 RGEVVW*SMAKSYAFPGSR*GL*S*RDGNGMLK*RMVQNPYSPKQFGVNQSQVGG*DGLKRVS*GALWL*GNSAIL**AQRWCW*ATEQCM*KI*KHLPKA*RK*FHNLPYGCSKTSQIFKAPGGSSQTKASKAIWEVLTRFFPV*GATKCQSQFQNVQ*GSAGVRSKES**ECSDYREPFRQVMQGLAVGCCSNFYEVAALHQI*Q*A*GG*SWADPCLLSTRCF 5760