Queries
Nucleotide Sequence (335 letters)
Query ID: | ds2016-58_76 |
Query definition: | No definition line |
Query length: | 489 |
Program: | TBLASTX 2.2.29+ |
Database: | /save/stheil/db/refseq_vir/viral.genomic.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
90.0 | 90.0 | 27% | 9.029e-18 | 46% | NC_033494 |
Alignments
Botryosphaeria dothidea virus 1 strain YZN115 segment RNA3 hypothetical protein gene, complete cds
Range 1: 439 to 705 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
90.0 bits(190) | 0.0 | 41/89(46%) | 0/89(0%) | Plus/Plus |
Query 1 TRLLILGSGASRVVTKYLVRGVSSVTFVDTSEDALSTLASHITSTGLEARV*AECVCQVAWSYLREYDEEPYDTVVATKCVGLILAHAP 267 +R+L+LGSG+SR + L R +S FVDT++DAL TL ++ S GL A + A V Q AW YL + YD ++ATKC+GL+ A P Subject 439 SRILVLGSGSSRGMIPILRRLPASAVFVDTNQDALDTLEDNLASVGLLAPIDATFVNQDAWEYLENAEVASYDLILATKCMGLVYAVDP 705
Nucleotide Sequence (405 letters)
Query ID: | ds2016-58_76 |
Query definition: | No definition line |
Query length: | 489 |
Program: | TBLASTX 2.2.29+ |
Database: | /save/stheil/db/refseq_vir/viral.genomic.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
53.3 | 164.2 | 31% | 5.047e-15 | 33% | NC_033494 |
Alignments
Botryosphaeria dothidea virus 1 strain YZN115 segment RNA3 hypothetical protein gene, complete cds
Range 1: 802 to 996 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.3 bits(110) | 0.0 | 25/65(38%) | 0/65(0%) | Minus/Plus |
Query 3 EWEGKPIATGMDPAMFDLATVGGRYDNDIGYSWDISHPDLDGVARFSSPFADHQVQVWHVFHFRA 197 E G PI P F LAT+ GRY D+ Y+ + LD VA+ + H VQ W +H+RA Subject 802 ERHGTPIPDVTAPEDFALATIAGRYAGDVCYTAQTTCTALDLVAKLTFDSVGHGVQEWAAYHYRA 996
Range 2: 601 to 705 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
46.9 bits(96) | 0.0 | 16/35(46%) | 0/35(0%) | Minus/Plus |
Query 294 YVCDDAWEYLKGLDTEQFDLIIALKCVGLILSSGP 398 +V DAWEYL+ + +DLI+A KC+GL+ + P Subject 601 FVNQDAWEYLENAEVASYDLILATKCMGLVYAVDP 705
Range 3: 801 to 998 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
36.8 bits(74) | 0.0 | 22/66(33%) | 0/66(0%) | Plus/Minus |
Query 1 RARK*KTCQTWT*WSAKGEEKRATPSRSGCEISQE*PMSLS*RPPTVARSNIAGSMPVAMGFPSHS 198 RAR +WT W + + AT SR+ + * S +*RP VAR+ +G++ +G P S Subject 801 RAR*W*AAHSWTPWPTESKVSLATRSRAVQVVCAV*HTSPA*RPAMVARAKSSGAVTSGIGVPWRS 998
Nucleotide Sequence (453 letters)
Query ID: | ds2016-58_76 |
Query definition: | No definition line |
Query length: | 489 |
Program: | TBLASTX 2.2.29+ |
Database: | /save/stheil/db/refseq_vir/viral.genomic.fna |
Graphic Summary
Descriptions
Alignments
Cladosporium cladosporioides virus 1 putative RNA-dependent RNA polymerase gene, complete cds
Range 1: 1754 to 2137 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
117.0 bits(249) | 0.0 | 43/128(34%) | 0/128(0%) | Minus/Plus |
Query 1 SGITTNISRVRFCSRAVVRTPEGLLVTRTHTALYQKLAARPEHDPMTDKLYVRAIMADYMGTDPVAYEAFSQVDRQLDVALDISVVTPKIKKILAPTARSFYGAEDDQALLNVLASLRAGQIDRRALL 384 +G+++ + VRFCSR + TP GL + R+HT+++ K+ R E DP+ +KLYVRA+M D +GTDP+ Y ++ +DV D + ++ K++ P A+ YG +++ + ++ L++ R +L Subject 1754 TGVSSQLGDVRFCSRGALLTPHGLAIVRSHTSIFHKIGGRAEVDPVINKLYVRALMVDLLGTDPILYHGLQHLEASIDVPGDARLSEHRLHKMVEPFAKKLYGNSSPESVASFVSLLKSPSAPDRGVL 2137
Botryosphaeria dothidea virus 1 strain YZN115 RNA-dependent RNA polymerase (RdRp) gene, complete cds
Range 1: 1773 to 2138 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
165.6 bits(355) | 0.0 | 66/122(54%) | 0/122(0%) | Minus/Plus |
Query 1 ISRVRFCSRAVVRTPEGLLVTRTHTALYQKLAARPEHDPMTDKLYVRAIMADYMGTDPVAYEAFSQVDRQLDVALDISVVTPKIKKILAPTARSFYGAEDDQALLNVLASLRAGQIDRRALL 366 + RFCSRA V+TP GL+VTR HT++YQKLA RP HDP DKLYVRA+M D+MGTDP+A+E VD +DV L +TP ++ +L A+SFYG D +L VL +L ++DRRALL Subject 1773 VGDARFCSRAAVQTPYGLIVTRPHTSIYQKLAGRPRHDPAIDKLYVRALMMDHMGTDPIAFEIMDSVDSMVDVDLSTVGLTPAVRSVLTDAAKSFYGDASDDSLSRVLEALSTSRVDRRALL 2138
Range 2: 1790 to 2092 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
82.2 bits(173) | 0.0 | 49/101(49%) | 0/101(0%) | Plus/Minus |
Query 47 TLRRAWSSSAP*KLRAVGARIFLIFGVTTEMSNATSNCLSTWENASYATGSVPM*SAIIARTYSLSVIGSCSGRAASFW*RAVCVRVTSRPSGVLTTAREQ 349 TL R S ++P* A GV+ + +TS ST S A GSVPM S + ART SLS+ GS GR ASFW* V RVT RP GV T AREQ Subject 1790 TLERLSSLASP*NDLAASVSTERTAGVSPTVDRSTSTIESTLSMISKAMGSVPMWSIMSART*SLSIAGSWRGRPASFW*IEVWGRVTIRP*GVWTAAREQ 2092
Range 3: 1761 to 1997 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
53.8 bits(111) | 0.0 | 29/79(37%) | 0/79(0%) | Plus/Minus |
Query 142 QRHIQLPVNLGECLIRDGISAHVVCHYCADIQLIRHRVMFRACRKLLVEGCMRAGDEQAFWCSDYCPRAEPNTADVRSN 378 Q H+ VN L DG+ HVV H A ++L+ RVM RA +LLV M D++ C D RAE + R++ Subject 1761 QVHVNHRVNAIHDLEGDGVGTHVVHHERAHVELVNSRVMARATCELLVN*GMGPRDDKTIGCLDSSTRAEARVPNPRAD 1997