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Nucleotide Sequence (469 letters)

Query ID:ds2016-58_48
Query definition:No definition line
Query length:589
Program:TBLASTX 2.2.29+
Database:/home/stheil/save/db/all_vir/all_vir_nucl.fna

Graphic Summary

Distribution of 1 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
47
94
141
188
235
282
329
376
423
469

Descriptions

Alignments

Uncultured totivirus genomic RNA containing putative RdRp, contig 95.1Hv1_454_1

Sequence ID: HE579658.1 Length: 2684 Number of Matches: 2

Range 1: 1635 to 2069 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
146.6 bits(317) 0.0 67/145(46%) 0/145(0%) Plus/Plus
Query       35  HSEDDFTQSLYIGNTVGRPHRDVDWDDETKKRSQPGKEIHVITSGGTRESTEQELRAMLMDTLEAEAVYKPGNSPSFADFYKKRANWMIRGSMSGEKNVAKDDKAVWLAINSEGLGVRINTTKTDVAEYVTAGQVWAVLENAPIH  469
                ++ DD  Q LY+ N VGRPHRDVDWD E  KR +  +E+ V T  G    TE+EL   ++ TL AE   K     SF +FYK RA+WMI+GS +GE+ +  + K V   +   G+ VR   TKTDVAEYVT  ++  VLE   IH
Subject   1635  YTSDDLPQMLYLANMVGRPHRDVDWDAEVVKRKRVLEEVRVATDLGMLNLTEEELEHEILATLLAEGSLKVKKVQSFENFYKDRASWMIKGSAAGERMLINEYKQVLSEVKELGVTVRQRATKTDVAEYVTYQEILDVLEGVSIH  2069

Range 2: 1613 to 2053 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
97.7 bits(207) 0.0 61/147(41%) 0/147(0%) Minus/Minus
Query       13  SNTAHTCPAVTYSATSVFVVLILTPSPSLLMANQTALSSFATFFSPDIDPRIIQLARFL*KSANEGLLPGL*TASASNVSISIALSSCSVDSRVPPLVITCISLPGCDLFLVSSSQSTSR*GLPTVLPM*SDCVKSSSLCAQTHPTH  453
                S+T+     VTYSATSV V L LT +P+ L +  T L S  +  SP  DP IIQLAR L*K +N+         SA+ V+     SS SV   +P  V T  S     L   S+SQSTSR GLPT+    S C +SS + +     H
Subject   1613  SSTSSISWYVTYSATSVLVALCLTVTPNSLTSLSTCLYSLISILSPAADPLIIQLARSL*KFSNDWTFFTFKLPSANRVANISCSSSSSVKFNIPKSVATRTSSSTRFLLTTSASQSTSRCGLPTMFAKYSICGRSSLVYSNVSAAH  2053

Uncultured totivirus genomic RNA containing putative RdRp, contig 95.1Hv1_454_5

Sequence ID: HE579660.1 Length: 816 Number of Matches: 2

Range 1: 146 to 580 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
143.4 bits(310) 0.0 66/145(46%) 0/145(0%) Plus/Plus
Query       35  HSEDDFTQSLYIGNTVGRPHRDVDWDDETKKRSQPGKEIHVITSGGTRESTEQELRAMLMDTLEAEAVYKPGNSPSFADFYKKRANWMIRGSMSGEKNVAKDDKAVWLAINSEGLGVRINTTKTDVAEYVTAGQVWAVLENAPIH  469
                ++ DD  Q LY+ N VGRPHRDVDWD E  KR +  +E+ V T  G    TE+EL   ++ T  AE   K     SF +FYK RA+WMI+GS +GE+ +  + K V   +   G+ VR   TKTDVAEYVT  ++  VLE   IH
Subject    146  YTSDDXPQMLYLANMVGRPHRDVDWDAEVVKRKRVLEEVRVATDLGMLNLTEEELEHEILATXLAEGSLKV*KVQSFENFYKDRASWMIKGSAAGERMLINEYKQVLXEVKELGVTVRQRATKTDVAEYVTYQEILDVLEGVSIH  580

Range 2: 124 to 564 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
96.4 bits(204) 0.0 61/147(41%) 0/147(0%) Minus/Minus
Query       13  SNTAHTCPAVTYSATSVFVVLILTPSPSLLMANQTALSSFATFFSPDIDPRIIQLARFL*KSANEGLLPGL*TASASNVSISIALSSCSVDSRVPPLVITCISLPGCDLFLVSSSQSTSR*GLPTVLPM*SDCVKSSSLCAQTHPTH  453
                S+T+     VTYSATSV V L LT +P+ L +  T L S  +  SP  DP IIQLAR L*K +N+         SA+ V+     SS SV   +P  V T  S     L   S+SQSTSR GLPT+    S C  SS + +     H
Subject    124  SSTSSISWYVTYSATSVLVALCLTVTPNSLTSLSTCLYSLISILSPAADPLIIQLARSL*KFSNDWTFYTFKLPSANXVANISCSSSSSVKFNIPKSVATRTSSSTRFLLTTSASQSTSRCGLPTMFAKYSICGXSSLVYSNVSAAH  564

Botrytis porri RNA virus 1 RNA 1, complete genome

Sequence ID: NC_017990.1 Length: 6215 Number of Matches: 3

Range 1: 4004 to 4438 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
136.6 bits(295) 0.0 60/145(41%) 0/145(0%) Plus/Plus
Query       35  HSEDDFTQSLYIGNTVGRPHRDVDWDDETKKRSQPGKEIHVITSGGTRESTEQELRAMLMDTLEAEAVYKPGNSPSFADFYKKRANWMIRGSMSGEKNVAKDDKAVWLAINSEGLGVRINTTKTDVAEYVTAGQVWAVLENAPIH  469
                H+ DD  Q LYI N VGRPHR+ DWDDE KKR++   EI +  +G    + E +L   ++  L  E   +     +F  FY  R NWMI+GS SGE+ +  + K +   +   G+ +R   TKTDVAEYV+A  V A+L++  IH
Subject   4004  HTPDDLVQCLYIANMVGRPHRECDWDDEVKKRTRNVGEIKIARNGKMVPADESQLEEEILQMLLKEGSIRVKKPKTFEQFYSSRGNWMIKGSASGERMLISEYKEIVGQVKGLGVELRERATKTDVAEYVSAQAVLALLDDMAIH  4438

Range 2: 4231 to 4437 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.1 bits(116) 0.0 30/69(43%) 0/69(0%) Minus/Minus
Query      262  CIGAFSNTAHTCPAVTYSATSVFVVLILTPSPSLLMANQTALSSFATFFSPDIDPRIIQLARFL*KSAN  468
                C+   S++A+T  A TYSATSVFV   L+ +PS L     +L S  +  SPD +P IIQ    L*  +N
Subject   4231  CMAMSSSSANTAWADTYSATSVFVARSLSSTPSPLTWPTISLYSDISILSPDAEPLIIQFPLLL*NCSN  4437

Range 3: 3970 to 4137 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
44.6 bits(91) 0.0 24/56(43%) 0/56(0%) Minus/Minus
Query        1  PLVITCISLPGCDLFLVSSSQSTSR*GLPTVLPM*SDCVKSSSLCAQTHPTHSAQI  168
                P +   IS     LFL SSSQS SR GLPT+  M   C +SS +C  +   H  +I
Subject   3970  PFLAILISPTFLVLFLTSSSQSHSRCGLPTMFAMYRHCTRSSGVC*NSPFAHLLRI  4137

Botrytis porri RNA virus 1 strain GarlicBc 72 segment 1, complete sequence

Sequence ID: JF716350.1 Length: 6215 Number of Matches: 3

Range 1: 4004 to 4438 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
136.6 bits(295) 0.0 60/145(41%) 0/145(0%) Plus/Plus
Query       35  HSEDDFTQSLYIGNTVGRPHRDVDWDDETKKRSQPGKEIHVITSGGTRESTEQELRAMLMDTLEAEAVYKPGNSPSFADFYKKRANWMIRGSMSGEKNVAKDDKAVWLAINSEGLGVRINTTKTDVAEYVTAGQVWAVLENAPIH  469
                H+ DD  Q LYI N VGRPHR+ DWDDE KKR++   EI +  +G    + E +L   ++  L  E   +     +F  FY  R NWMI+GS SGE+ +  + K +   +   G+ +R   TKTDVAEYV+A  V A+L++  IH
Subject   4004  HTPDDLVQCLYIANMVGRPHRECDWDDEVKKRTRNVGEIKIARNGKMVPADESQLEEEILQMLLKEGSIRVKKPKTFEQFYSSRGNWMIKGSASGERMLISEYKEIVGQVKGLGVELRERATKTDVAEYVSAQAVLALLDDMAIH  4438

Range 2: 4231 to 4437 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
56.1 bits(116) 0.0 30/69(43%) 0/69(0%) Minus/Minus
Query      262  CIGAFSNTAHTCPAVTYSATSVFVVLILTPSPSLLMANQTALSSFATFFSPDIDPRIIQLARFL*KSAN  468
                C+   S++A+T  A TYSATSVFV   L+ +PS L     +L S  +  SPD +P IIQ    L*  +N
Subject   4231  CMAMSSSSANTAWADTYSATSVFVARSLSSTPSPLTWPTISLYSDISILSPDAEPLIIQFPLLL*NCSN  4437

Range 3: 3970 to 4137 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
44.6 bits(91) 0.0 24/56(43%) 0/56(0%) Minus/Minus
Query        1  PLVITCISLPGCDLFLVSSSQSTSR*GLPTVLPM*SDCVKSSSLCAQTHPTHSAQI  168
                P +   IS     LFL SSSQS SR GLPT+  M   C +SS +C  +   H  +I
Subject   3970  PFLAILISPTFLVLFLTSSSQSHSRCGLPTMFAMYRHCTRSSGVC*NSPFAHLLRI  4137

Uncultured chrysovirus genomic RNA containing putative RdRp, contig 447Pv1_454_1

Sequence ID: HE579578.1 Length: 2218 Number of Matches: 3

Range 1: 741 to 1163 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
138.4 bits(299) 0.0 63/141(45%) 0/141(0%) Plus/Plus
Query       47  DFTQSLYIGNTVGRPHRDVDWDDETKKRSQPGKEIHVITSGGTRESTEQELRAMLMDTLEAEAVYKPGNSPSFADFYKKRANWMIRGSMSGEKNVAKDDKAVWLAINSEGLGVRINTTKTDVAEYVTAGQVWAVLENAPIH  469
                D  QSLY+ N VGRPHRDVDWD E +KR +   EI ++ S G  E T ++L+ M+ + L+ EA  K     S   FYK+R+ WMI GS SGEK +  D K +   +   G+ +R   TK D+AEYVT   V  VL +  IH
Subject    741  DVVQSLYMANMVGRPHRDVDWDAEVEKRKRRLGEIRLVGSSGPIEVTIEQLKTMITEMLDEEASIKIAKCQSLEKFYKQRSAWMIGGSASGEKMILSDYKVLIRELTEAGVQLRPKATKVDIAEYVTYEDVEQVLSDIAIH  1163

Range 2: 986 to 1162 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.4 bits(95) 0.0 25/59(42%) 0/59(0%) Minus/Minus
Query      292  CIGAFSNTAHTCPAVTYSATSVFVVLILTPSPSLLMANQTALSSFATFFSPDIDPRIIQ  468
                CI     T  T   VTYSA S FV L L+ +P+ + +    L S    FSP+ DP IIQ
Subject    986  CIAMSLKTCSTSS*VTYSAMSTFVALGLSCTPASVSSLIRTL*SLRIIFSPEADPPIIQ  1162

Range 3: 740 to 928 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
45.5 bits(93) 0.0 28/63(44%) 0/63(0%) Minus/Minus
Query       46  ASASNVSISIALSSCSVDSRVPPLVITCISLPGCDLFLVSSSQSTSR*GLPTVLPM*SDCVKS  234
                AS+SN+S+ +  S   V S  P L    IS     LF  S+SQSTSR G PT+L M   C  S
Subject    740  ASSSNISVIMVFSCSIVTSIGPELPTKRISPNLLFLFSTSASQSTSRCGRPTILAMYRLCTTS  928