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Nucleotide Sequence (426 letters)

Query ID:ds2016-57_42
Query definition:No definition line
Query length:352
Program:TBLASTX 2.2.29+
Database:/save/stheil/db/refseq_vir/viral.genomic.fna

Graphic Summary

Distribution of 1 Blast Hits on the Query Sequence

Mouse-over to show defline and scores, click to show alignments

Color key for alignment scores

<40
40–50
50–80
80–200
200≤
query:
43
86
129
172
215
258
301
344
387
426

Descriptions

Alignments

Fusarium graminearum dsRNA mycovirus-4 dsRNA1, complete genome

Sequence ID: Length: 2383 Number of Matches: 5

Range 1: 1935 to 2297 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
157.3 bits(337) 0.0 73/121(60%) 0/121(0%) Plus/Plus
Query        5  GDAFDVVIPYRPIEETVARLYYPERVGGGATRTYLRALGNLLDNYGNPHAAKWLNGXXXXXXXXXXXXPVEWTSDTVQDAARDYTSELVVVPKPKRWSFEEWLALTLTPKEEITDMYTIA*  367
                G    V +PYRP EET   +YYPER   G  RTY RALGNLLDNYGNP  A WLN LLDWLE +++LLP +W  DTVQDAARDYTS+LV VP+P RW+FEEW+ L L+  +   + Y  A*
Subject   1935  GRKITVALPYRPCEETFVHMYYPERKSEGVERTYQRALGNLLDNYGNPMMADWLNKLLDWLEPQMELLPTDWLEDTVQDAARDYTSDLVRVPRPLRWTFEEWVHLCLSSDDSDPEWYMYA*  2297

Range 2: 2060 to 2293 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
70.3 bits(147) 0.0 40/78(51%) 0/78(0%) Minus/Minus
Query      130  AMVYISVISSFGVRVSASHSSNDHRLGFGTTTNSLV*SLAASCTVSDVHSTGSKSNRDSNQSRSPFSHLAACGLP*LS  363
                A +Y S   S   +   +HSSN  R G GT T SLV*S AASCTVS   S G+ S   S+QS S FS  A  G P*LS
Subject   2060  AYIYHSGSESSDDKHKCTHSSNVQRNGRGTRTRSLV*SRAASCTVSSSQSVGNSSICGSSQSSSLFSQSAIIGFP*LS  2293

Range 3: 1949 to 2008 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
21.7 bits(41) 0.0 12/20(60%) 0/20(0%) Minus/Minus
Query       19  RSG*YRRATVSSMGR*GITT  78
                RSG*Y    VSS GR G  T
Subject   1949  RSG*YICTKVSSHGRYGKAT  2008

Range 4: 2058 to 2240 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.3 bits(97) 0.0 22/61(36%) 0/61(0%) Minus/Minus
Query      128  PFLKRPSFGLRNNYQLTGIVSGCVLHRVRCPFHW**VQSGLQPVKKSIQPLSSMRITVVIQ  310
                P LK P+   R+ +Q+TG+V   +L+R+  P    *+   LQPV++ IQP+    I+V+++
Subject   2058  PLLKCPAQWARHTHQVTGVVPRRILYRILQPIGGQ*LHLWLQPVQQLIQPVRHHWISVIVE  2240

Range 5: 2047 to 2241 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
44.6 bits(91) 0.0 24/65(37%) 0/65(0%) Plus/Plus
Query      117  WEISWITTVIRMLLSG*MDFLTGWSPDWTYYQWNGHLTRCRTQPETIPVSW*LFRSPNDGRLRNG  311
                W I    T I+   +G*+   TGWS  W+Y    G   R R +  T PV+W + R+   G LR+G
Subject   2047  WAIYSTITEIQ*WRTG*ISCWTGWSHRWSYCPPIGWRIRYRMRRGTTPVTWCVCRAHCAGHLRSG  2241

Cryphonectria parasitica bipartite mycovirus 1 strain 09269 segment RNA1, complete sequence

Sequence ID: Length: 2026 Number of Matches: 1

Range 1: 1526 to 1888 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
89.0 bits(188) 0.0 46/121(38%) 0/121(0%) Plus/Plus
Query        2  GGDAFDVVIPYRPIEETVARLYYPERVGGGATRTYLRALGNLLDNYGNPHAAKWLNGXXXXXXXXXXXXPVEWTSDTVQDAARDYTSELVVVPKPKRWSFEEWLALTLTPKEEITDMYTIA  364
                G  A    IPYRP  ET  RL YPE       +TYLRALGN LD  GN     WL   ++WL+ +L   P EW  +  +  +RDY++  V VP+P++  F++W  L +  +E    ++  A
Subject   1526  GDGAMQQPIPYRPASETYLRLLYPEYGDLPTPQTYLRALGNYLDAAGNRAMEAWLTAFIEWLQPQLSYEPNEWPDNFKRMVSRDYSNVGVEVPRPRQIDFQQWRDLVVLGREAYRRLWRTA  1888

Curvularia thermal tolerance virus RNA1, complete sequence

Sequence ID: Length: 2149 Number of Matches: 1

Range 1: 1617 to 1952 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
99.6 bits(211) 0.0 46/112(41%) 0/112(0%) Plus/Plus
Query       20  VVIPYRPIEETVARLYYPERVGGGATRTYLRALGNLLDNYGNPHAAKWLNGXXXXXXXXXXXXPVEWTSDTVQDAARDYTSELVVVPKPKRWSFEEWLALTLTPKEEITDMY  355
                V IPYRP +ET  RL YPE     A +T+LR LGN LD  GNP   KWL G +DWLE ++   P  W S+  +  +RDY+   + +P+P+R  +E+W  L + P+++   ++
Subject   1617  VAIPYRPFKETYLRLLYPEYGSLEADQTWLRLLGNYLDAAGNPVTEKWLQGFMDWLEPQVVAPPQVWPSNFQRMVSRDYSGIGIEMPRPERMCYEQWRDLVVLPRDDYRQLW  1952

Penicillium aurantiogriseum bipartite virus 1 segment RNA 1 putative RdRp gene, complete cds

Sequence ID: Length: 2110 Number of Matches: 3

Range 1: 1578 to 1730 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
63.4 bits(132) 0.0 27/51(53%) 0/51(0%) Plus/Plus
Query       20  VVIPYRPIEETVARLYYPERVGGGATRTYLRALGNLLDNYGNPHAAKWLNG  172
                VVIPYRP  ET  RL YPE       +T+LR LGN +D  GNP   +WL G
Subject   1578  VVIPYRPFGETFLRLLYPEYGTLDVEQTWLRVLGNYIDAAGNPVTERWLQG  1730

Range 2: 1773 to 1898 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
47.8 bits(98) 0.0 17/42(40%) 0/42(0%) Plus/Plus
Query      215  EWTSDTVQDAARDYTSELVVVPKPKRWSFEEWLALTLTPKEE  340
                +W S+ ++  +RDYT   V VP+P+R S+E+W  L + P+ E
Subject   1773  QWPSNFLRMVSRDYTGVGVEVPRPERMSYEQWRDLVVLPRSE  1898

Range 3: 1697 to 1960 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
46.4 bits(95) 0.0 29/88(33%) 0/88(0%) Minus/Minus
Query      139  YAKGVKSPSTQAQAMVYISVISSFGVRVSASHSSNDHRLGFGTTTNSLV*SLAASCTVSDVHSTGSKSNRDSNQSRSPFSHLAACGLP  402
                Y  G  S  + + +     + S  G    + H S D R G GT+T + V*S        + H     S   SNQS SP+SH +  GLP
Subject   1697  YISGS*SAVSSSSSAFQADLYSDLGRTTRSRHCSYDIRSGRGTSTPTPV*SRDTIRRKLEGHWANVASTCGSNQSSSPWSHRSVTGLP  1960

Sclerotium hydrophilum virus 1 isolate ShR#20 putative RNA-dependent RNA polymerase gene, complete cds

Sequence ID: Length: 2121 Number of Matches: 2

Range 1: 1743 to 1997 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
49.6 bits(102) 0.0 26/85(31%) 0/85(0%) Plus/Plus
Query      101  TYLRALGNLLDNYGNPHAAKWLNGXXXXXXXXXXXXPVEWTSDTVQDAARDYTSELVVVPKPKRWSFEEWLALTLTPKEEITDMY  355
                +Y+RA+GN +D  GN     +L G L WLE +     + W  D +Q     Y          +R+++EEWL L L  K+ +  ++
Subject   1743  SYMRAVGNYMDGAGNKLTRVFLEGYLTWLEGKGHHEGIRWREDDLQKMTGIYDGVAETFLPARRYTYEEWLDLVLVEKKVVQRVF  1997

Range 2: 1626 to 1703 GenBank Graphics

ScoreExpectIdentitiesGapsStrand
42.8 bits(87) 0.0 17/26(65%) 0/26(0%) Plus/Plus
Query        8  DAFDVVIPYRPIEETVARLYYPERVG  85
                +A   VIPYRPI ET+ RL YPER G
Subject   1626  EAIQAVIPYRPITETLDRLAYPERPG  1703