Queries
Nucleotide Sequence (1655 letters)
Query ID: | ds2016-57_12 |
Query definition: | No definition line |
Query length: | 638 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
63.4 | 97.4 | 9% | 8.525e-10 | 30% | KX355143.1 | |
63.4 | 97.4 | 9% | 8.525e-10 | 30% | NC_031463.1 | |
63.8 | 102.0 | 8% | 2.136e-11 | 32% | KY357509.1 | |
59.3 | 102.9 | 8% | 1.854e-11 | 28% | KX355164.1 | |
59.3 | 102.9 | 8% | 1.854e-11 | 28% | NC_031461.1 |
Alignments
Ceratobasidium endornavirus B isolate Murdoch 2 polyprotein and ORF2 genes, complete cds
Sequence ID: KX355143.1 Length: 23635 Number of Matches: 2
Range 1: 9098 to 9427 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
63.4 bits(132) | 0.0 | 33/110(30%) | 0/110(0%) | Plus/Plus |
Query 252 VVTPLDPVSKVTIRVPHLTVDALQLTRSPLITTRVVRVTRQLFKSMSLRMLRNGTTFGDLLVYGRMLLHTKYFSHDGISSQHNETPSEVLDAALAVWSIYGPMVTGMRHA 581 +V P + K+T+ V + + + + L+TTR V V +L + + L R G TF DL R++L+ + F+ I + + +PS LD A AV G +++G++ A Subject 9098 LVNPQARMVKITLPVFNPDIISNLTHNNNLLTTRTVEVPDRLLRQLRLTHAREGKTFTDLCATARVMLNGEQFTEFNIRNTYKTSPSVALDTAYAVVIYDGKLISGLKSA 9427
Ceratobasidium endornavirus B isolate Murdoch 2 polyprotein and ORF2 genes, complete cds
Sequence ID: NC_031463.1 Length: 23635 Number of Matches: 2
Range 1: 9098 to 9427 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
63.4 bits(132) | 0.0 | 33/110(30%) | 0/110(0%) | Plus/Plus |
Query 252 VVTPLDPVSKVTIRVPHLTVDALQLTRSPLITTRVVRVTRQLFKSMSLRMLRNGTTFGDLLVYGRMLLHTKYFSHDGISSQHNETPSEVLDAALAVWSIYGPMVTGMRHA 581 +V P + K+T+ V + + + + L+TTR V V +L + + L R G TF DL R++L+ + F+ I + + +PS LD A AV G +++G++ A Subject 9098 LVNPQARMVKITLPVFNPDIISNLTHNNNLLTTRTVEVPDRLLRQLRLTHAREGKTFTDLCATARVMLNGEQFTEFNIRNTYKTSPSVALDTAYAVVIYDGKLISGLKSA 9427
Agaricus bisporus endornavirus 1 isolate AbEV1 2990, partial sequence
Sequence ID: KY357509.1 Length: 12730 Number of Matches: 2
Range 1: 6721 to 7014 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
63.8 bits(133) | 0.0 | 31/98(32%) | 0/98(0%) | Plus/Plus |
Query 342 ITTRVVRVTRQLFKSMSLRMLRNGTTFGDLLVYGRMLLHTKYFSHDGISSQHNETPSEVLDAALAVWSIYGPMVTGMRHAQNLLQTSDDKESTIMQLI 635 +T++ + V+R+LF+ LR+LR LL + R H Y+S G Q+ ETP +D LAV+ Y T + LQ K+ I +L+ Subject 6721 VTSQEITVSRKLFRDCGLRLLRENHDIDSLLKHVRTKQHATYYSDSGSYRQYKETPGAAMDLCLAVYLRYNNKFTELFDTIKWLQPETVKQEGIFELL 7014
Ceratobasidium endornavirus C isolate Murdoch 3 polyprotein and ORF2 genes, complete cds
Sequence ID: KX355164.1 Length: 21004 Number of Matches: 2
Range 1: 7667 to 7867 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
59.3 bits(123) | 0.0 | 24/67(36%) | 0/67(0%) | Plus/Plus |
Query 342 ITTRVVRVTRQLFKSMSLRMLRNGTTFGDLLVYGRMLLHTKYFSHDGISSQHNETPSEVLDAALAVW 542 +T R + + ++++S++LR LR GT+F DLL+ R +LH +S G + +H S ++D AL V+ Subject 7667 VTKRKLTIDNRIYRSLNLRALREGTSFEDLLMAARTMLHGVIYSPGGTAWKHQSDSSILMDTALVVF 7867
Range 2: 8801 to 8980 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
43.7 bits(89) | 0.0 | 17/60(28%) | 0/60(0%) | Plus/Plus |
Query 1080 RIHRVGVDIRDFNVLIITTGSKGDVAPIIQLADWLSTIASGVAVLCPSHLVPTTKSFSRI 1259 ++ +++ N++I GS+GD+ P LA LS + V+ +CPS+ T S + + Subject 8801 KVRTASINLNTSNIVIFAIGSRGDIRPAHNLAKQLSLDGASVSFVCPSNSCEQTGSINYV 8980
Ceratobasidium endornavirus C isolate Murdoch 3 polyprotein and ORF2 genes, complete cds
Sequence ID: NC_031461.1 Length: 21004 Number of Matches: 2
Range 1: 7667 to 7867 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
59.3 bits(123) | 0.0 | 24/67(36%) | 0/67(0%) | Plus/Plus |
Query 342 ITTRVVRVTRQLFKSMSLRMLRNGTTFGDLLVYGRMLLHTKYFSHDGISSQHNETPSEVLDAALAVW 542 +T R + + ++++S++LR LR GT+F DLL+ R +LH +S G + +H S ++D AL V+ Subject 7667 VTKRKLTIDNRIYRSLNLRALREGTSFEDLLMAARTMLHGVIYSPGGTAWKHQSDSSILMDTALVVF 7867
Range 2: 8801 to 8980 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
43.7 bits(89) | 0.0 | 17/60(28%) | 0/60(0%) | Plus/Plus |
Query 1080 RIHRVGVDIRDFNVLIITTGSKGDVAPIIQLADWLSTIASGVAVLCPSHLVPTTKSFSRI 1259 ++ +++ N++I GS+GD+ P LA LS + V+ +CPS+ T S + + Subject 8801 KVRTASINLNTSNIVIFAIGSRGDIRPAHNLAKQLSLDGASVSFVCPSNSCEQTGSINYV 8980
Nucleotide Sequence (332 letters)
Query ID: | ds2016-57_12 |
Query definition: | No definition line |
Query length: | 638 |
Program: | TBLASTX 2.2.29+ |
Database: | /home/stheil/save/db/all_vir/all_vir_nucl.fna |
Graphic Summary
Descriptions
Sequences producing significant alignments:
Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|
52.4 | 52.4 | 17% | 2.444e-05 | 35% | KX883795.1 | |
52.4 | 52.4 | 17% | 2.444e-05 | 35% | NC_032798.1 | |
58.8 | 58.8 | 13% | 2.864e-07 | 53% | KX355164.1 | |
58.8 | 58.8 | 13% | 2.864e-07 | 53% | NC_031461.1 | |
49.6 | 49.6 | 13% | 0.0001643 | 52% | AM420293.1 |
Alignments
Shahe endorna like virus 1 strain SHWC0209c12790 hypothetical protein gene, complete cds
Sequence ID: KX883795.1 Length: 15783 Number of Matches: 1
Range 1: 10441 to 10611 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.4 bits(108) | 0.0 | 20/57(35%) | 0/57(0%) | Minus/Plus |
Query 9 DHHETMQRCHTVFHHGGAGTTQEAHRQGCFSVITPVAYDQGFWDALTTSKRLGSAIE 179 D++ + RC + HHGG+GTT +A S+I P+ DQ +W R+G +E Subject 10441 DYNLVLPRCKAIVHHGGSGTTHQAVSYDVPSLILPIFGDQFWWSKRVNDLRIGIGLE 10611
Shahe endorna like virus 1 strain SHWC0209c12790 hypothetical protein gene, complete cds
Sequence ID: NC_032798.1 Length: 15783 Number of Matches: 1
Range 1: 10441 to 10611 GenBank Graphics
Score | Expect | Identities | Gaps | Strand |
---|---|---|---|---|
52.4 bits(108) | 0.0 | 20/57(35%) | 0/57(0%) | Minus/Plus |
Query 9 DHHETMQRCHTVFHHGGAGTTQEAHRQGCFSVITPVAYDQGFWDALTTSKRLGSAIE 179 D++ + RC + HHGG+GTT +A S+I P+ DQ +W R+G +E Subject 10441 DYNLVLPRCKAIVHHGGSGTTHQAVSYDVPSLILPIFGDQFWWSKRVNDLRIGIGLE 10611
Ceratobasidium endornavirus C isolate Murdoch 3 polyprotein and ORF2 genes, complete cds
Sequence ID: KX355164.1 Length: 21004 Number of Matches: 1
Ceratobasidium endornavirus C isolate Murdoch 3 polyprotein and ORF2 genes, complete cds
Sequence ID: NC_031461.1 Length: 21004 Number of Matches: 1
Saccharopolyspora erythraea NRRL2338 complete genome
Sequence ID: AM420293.1 Length: 8212805 Number of Matches: 1